Your job contains 1 sequence.
>psy12705
MSATSKLVDIGNLSFQQEFKVQLLLQLHWKDPRLEYRHYAPHITEMVGERNFIQNIWTPH
IYLTNERDSLVLGLYRRDMLVSILPDGDMLFSTRSRAYMYSSLTLTFILNRQYGFYLMDF
YAPSILLVCISWVSFWMAPDAVPGRTILGASTMLTFFQLGIETGSSLPNVSYIRSNDVWF
FACTVFIFLSLAEFAFVNTIWRYG
The BLAST search returned 7 gene products which did not match your query constraints. Please see the full BLAST report below for the details.
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= psy12705
(204 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
FB|FBgn0029733 - symbol:CG6927 species:7227 "Drosophila m... 332 1.4e-32 2
UNIPROTKB|F1MNR0 - symbol:GLRA3 "Uncharacterized protein"... 246 5.7e-31 2
UNIPROTKB|F1RJ16 - symbol:GLRA3 "Uncharacterized protein"... 246 5.9e-31 2
FB|FBgn0036727 - symbol:CG7589 species:7227 "Drosophila m... 336 2.9e-30 1
UNIPROTKB|Q5JXX5 - symbol:GLRA4 "Glycine receptor subunit... 242 4.1e-30 2
ZFIN|ZDB-GENE-020402-1 - symbol:glra3 "glycine receptor, ... 250 5.2e-30 2
UNIPROTKB|F1Q2X8 - symbol:GLRA3 "Uncharacterized protein"... 246 6.2e-30 2
UNIPROTKB|Q14C71 - symbol:GLRA1 "GLRA1 protein" species:9... 240 7.6e-30 2
MGI|MGI:95750 - symbol:Glra4 "glycine receptor, alpha 4 s... 243 8.4e-30 2
RGD|1564103 - symbol:Glra4 "glycine receptor, alpha 4" sp... 243 8.4e-30 2
UNIPROTKB|E1BHI1 - symbol:GLRA4 "Uncharacterized protein"... 243 8.6e-30 2
UNIPROTKB|F1RYC5 - symbol:LOC100525376 "Uncharacterized p... 243 8.6e-30 2
UNIPROTKB|F1NMN1 - symbol:GLRA3 "Uncharacterized protein"... 245 1.1e-29 2
UNIPROTKB|J9P291 - symbol:GLRA3 "Uncharacterized protein"... 246 1.5e-29 2
UNIPROTKB|E2R7P3 - symbol:GLRA3 "Uncharacterized protein"... 246 1.8e-29 2
UNIPROTKB|O75311 - symbol:GLRA3 "Glycine receptor subunit... 246 1.8e-29 2
MGI|MGI:95749 - symbol:Glra3 "glycine receptor, alpha 3 s... 246 1.8e-29 2
RGD|621229 - symbol:Glra3 "glycine receptor, alpha 3" spe... 246 1.8e-29 2
UNIPROTKB|E2QZJ3 - symbol:GLRA2 "Uncharacterized protein"... 246 2.0e-29 2
UNIPROTKB|E2RCM7 - symbol:GLRA4 "Uncharacterized protein"... 242 2.9e-29 2
UNIPROTKB|F1SQV0 - symbol:GLRA2 "Uncharacterized protein"... 246 3.2e-29 2
UNIPROTKB|K7GSI6 - symbol:GLRA2 "Uncharacterized protein"... 246 3.2e-29 2
ZFIN|ZDB-GENE-991117-1 - symbol:glra1 "glycine receptor, ... 242 6.2e-29 2
UNIPROTKB|F1RQB7 - symbol:GLRA1 "Uncharacterized protein"... 240 6.4e-29 2
UNIPROTKB|F1NH12 - symbol:GLRA1 "Uncharacterized protein"... 240 7.4e-29 2
UNIPROTKB|E9PT06 - symbol:Glra1 "Glycine receptor subunit... 240 7.9e-29 2
UNIPROTKB|P57695 - symbol:GLRA1 "Glycine receptor subunit... 240 8.0e-29 2
UNIPROTKB|F1PC16 - symbol:GLRA1 "Uncharacterized protein"... 240 8.0e-29 2
UNIPROTKB|P23415 - symbol:GLRA1 "Glycine receptor subunit... 240 8.0e-29 2
MGI|MGI:95747 - symbol:Glra1 "glycine receptor, alpha 1 s... 240 8.0e-29 2
RGD|2704 - symbol:Glra1 "glycine receptor, alpha 1" speci... 240 8.0e-29 2
ZFIN|ZDB-GENE-010410-3 - symbol:glra4a "glycine receptor,... 243 9.5e-29 2
UNIPROTKB|F1Q344 - symbol:GABRD "Uncharacterized protein"... 239 1.2e-28 2
UNIPROTKB|A2VE38 - symbol:GABRD "Gamma-aminobutyric acid ... 238 1.5e-28 2
UNIPROTKB|E2R3M6 - symbol:GABRD "Uncharacterized protein"... 239 1.7e-28 2
UNIPROTKB|G5E5K0 - symbol:GLRA2 "Uncharacterized protein"... 246 1.7e-28 2
UNIPROTKB|F6Y3F7 - symbol:GLRA2 "Uncharacterized protein"... 246 1.7e-28 2
UNIPROTKB|P23416 - symbol:GLRA2 "Glycine receptor subunit... 246 1.7e-28 2
MGI|MGI:95748 - symbol:Glra2 "glycine receptor, alpha 2 s... 246 1.7e-28 2
RGD|2705 - symbol:Glra2 "glycine receptor, alpha 2" speci... 246 1.7e-28 2
UNIPROTKB|P22771 - symbol:Glra2 "Glycine receptor subunit... 246 1.7e-28 2
RGD|61901 - symbol:Gabrd "gamma-aminobutyric acid (GABA) ... 238 1.9e-28 2
UNIPROTKB|O14764 - symbol:GABRD "Gamma-aminobutyric acid ... 238 2.0e-28 2
ZFIN|ZDB-GENE-020402-2 - symbol:glra4b "glycine receptor,... 240 2.0e-28 2
UNIPROTKB|E1BTB5 - symbol:GLRA2 "Uncharacterized protein"... 246 2.8e-28 2
UNIPROTKB|J9P3X1 - symbol:GABRB3 "Uncharacterized protein... 233 4.5e-28 2
UNIPROTKB|F1MAU5 - symbol:GABRB3 "Uncharacterized protein... 233 4.9e-28 2
UNIPROTKB|E1BW41 - symbol:LOC100858201 "Uncharacterized p... 233 5.6e-28 2
ZFIN|ZDB-GENE-030131-8196 - symbol:gabrb2 "gamma-aminobut... 238 5.9e-28 2
UNIPROTKB|F1LRQ0 - symbol:Gabrb3 "Gamma-aminobutyric acid... 233 6.3e-28 2
UNIPROTKB|F5GXV5 - symbol:GABRB1 "Gamma-aminobutyric acid... 230 7.2e-28 2
ZFIN|ZDB-GENE-111215-5 - symbol:gabrb2l "gamma-aminobutyr... 232 8.3e-28 2
WB|WBGene00000232 - symbol:avr-14 species:6239 "Caenorhab... 242 8.6e-28 2
FB|FBgn0039840 - symbol:CG11340 species:7227 "Drosophila ... 315 9.1e-28 1
UNIPROTKB|F5H3D2 - symbol:GABRB3 "Gamma-aminobutyric acid... 233 1.2e-27 2
UNIPROTKB|P28472 - symbol:GABRB3 "Gamma-aminobutyric acid... 233 1.3e-27 2
MGI|MGI:95621 - symbol:Gabrb3 "gamma-aminobutyric acid (G... 233 1.3e-27 2
RGD|2651 - symbol:Gabrb3 "gamma-aminobutyric acid (GABA) ... 233 1.3e-27 2
UNIPROTKB|P19019 - symbol:GABRB3 "Gamma-aminobutyric acid... 233 1.3e-27 2
ZFIN|ZDB-GENE-101102-2 - symbol:gabrb3 "gamma-aminobutyri... 235 1.4e-27 2
UNIPROTKB|F1PEG2 - symbol:GABRB1 "Uncharacterized protein... 230 2.2e-27 2
UNIPROTKB|E7EV50 - symbol:GABRB2 "Gamma-aminobutyric acid... 229 2.2e-27 2
ZFIN|ZDB-GENE-041014-174 - symbol:gabrr2b "gamma-aminobut... 220 2.2e-27 2
UNIPROTKB|F5H7N0 - symbol:GABRB3 "Gamma-aminobutyric acid... 233 2.3e-27 2
ZFIN|ZDB-GENE-090313-230 - symbol:si:dkey-20i10.4 "si:dke... 231 2.4e-27 2
UNIPROTKB|P08220 - symbol:GABRB1 "Gamma-aminobutyric acid... 230 2.8e-27 2
UNIPROTKB|P18505 - symbol:GABRB1 "Gamma-aminobutyric acid... 230 2.8e-27 2
MGI|MGI:95619 - symbol:Gabrb1 "gamma-aminobutyric acid (G... 230 2.8e-27 2
RGD|2649 - symbol:Gabrb1 "gamma-aminobutyric acid (GABA) ... 230 2.8e-27 2
ZFIN|ZDB-GENE-010410-2 - symbol:glrba "gylcine receptor, ... 231 4.6e-27 2
UNIPROTKB|Q90590 - symbol:GABARB "Uncharacterized protein... 227 5.3e-27 2
ZFIN|ZDB-GENE-040801-106 - symbol:glrbb "glycine receptor... 234 5.3e-27 2
UNIPROTKB|P0C2W5 - symbol:GABRB2 "Gamma-aminobutyric acid... 229 5.7e-27 2
UNIPROTKB|L7N0C0 - symbol:GABRB2 "Uncharacterized protein... 229 5.8e-27 2
RGD|2650 - symbol:Gabrb2 "gamma-aminobutyric acid (GABA) ... 229 5.8e-27 2
UNIPROTKB|F1MDL0 - symbol:GLRB "Glycine receptor subunit ... 232 7.2e-27 2
UNIPROTKB|F1NHG7 - symbol:GABRR3 "Uncharacterized protein... 215 8.2e-27 2
UNIPROTKB|P47870 - symbol:GABRB2 "Gamma-aminobutyric acid... 229 8.8e-27 2
MGI|MGI:95620 - symbol:Gabrb2 "gamma-aminobutyric acid (G... 229 8.8e-27 2
MGI|MGI:95751 - symbol:Glrb "glycine receptor, beta subun... 231 9.2e-27 2
RGD|2706 - symbol:Glrb "glycine receptor, beta" species:1... 231 9.2e-27 2
UNIPROTKB|Q9GJS9 - symbol:GLRB "Glycine receptor subunit ... 231 9.3e-27 2
UNIPROTKB|E2QS67 - symbol:GLRB "Uncharacterized protein" ... 231 9.3e-27 2
UNIPROTKB|P48167 - symbol:GLRB "Glycine receptor subunit ... 231 9.3e-27 2
UNIPROTKB|E1BFC0 - symbol:GABRB2 "Gamma-aminobutyric acid... 229 9.4e-27 2
UNIPROTKB|F1NB54 - symbol:GABRB2 "Uncharacterized protein... 227 9.9e-27 2
UNIPROTKB|F1P037 - symbol:GLRB "Uncharacterized protein" ... 227 1.3e-26 2
UNIPROTKB|E1B988 - symbol:GABRR3 "Uncharacterized protein... 221 4.2e-26 2
ZFIN|ZDB-GENE-060825-164 - symbol:gabrr2a "gamma-aminobut... 220 4.6e-26 2
UNIPROTKB|Q75NA5 - symbol:Rdl "Gamma-aminobutyric acid re... 220 8.9e-26 2
WB|WBGene00001592 - symbol:glc-2 species:6239 "Caenorhabd... 226 1.0e-25 2
UNIPROTKB|A8MPY1 - symbol:GABRR3 "Gamma-aminobutyric acid... 222 1.1e-25 2
UNIPROTKB|Q9BLY8 - symbol:Rdl "Gamma-aminobutyric acid re... 220 1.1e-25 2
UNIPROTKB|B7ZBQ7 - symbol:GABRR1 "Gamma-aminobutyric acid... 215 1.3e-25 2
UNIPROTKB|E1BCQ5 - symbol:GABRR1 "Uncharacterized protein... 215 2.2e-25 2
UNIPROTKB|F1S0D1 - symbol:GABRR1 "Uncharacterized protein... 215 2.2e-25 2
UNIPROTKB|P24046 - symbol:GABRR1 "Gamma-aminobutyric acid... 215 4.6e-25 2
MGI|MGI:95625 - symbol:Gabrr1 "gamma-aminobutyric acid (G... 215 4.6e-25 2
RGD|61900 - symbol:Gabrr1 "gamma-aminobutyric acid (GABA)... 215 4.6e-25 2
UNIPROTKB|P50572 - symbol:Gabrr1 "Gamma-aminobutyric acid... 215 4.6e-25 2
WARNING: Descriptions of 211 database sequences were not reported due to the
limiting value of parameter V = 100.
>FB|FBgn0029733 [details] [associations]
symbol:CG6927 species:7227 "Drosophila melanogaster"
[GO:0016935 "glycine-gated chloride channel complex" evidence=ISS]
[GO:0016934 "extracellular-glycine-gated chloride channel activity"
evidence=ISS] [GO:0045211 "postsynaptic membrane" evidence=IEA]
[GO:0006811 "ion transport" evidence=IEA] InterPro:IPR006028
InterPro:IPR006029 InterPro:IPR006201 InterPro:IPR006202
InterPro:IPR018000 Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252
PRINTS:PR00253 PROSITE:PS00236 GO:GO:0016021 GO:GO:0005886
GO:GO:0030054 GO:GO:0045211 GO:GO:0005230 Gene3D:2.70.170.10
PANTHER:PTHR18945 SUPFAM:SSF90112 SUPFAM:SSF63712 EMBL:AE014298
GeneTree:ENSGT00540000070314 InterPro:IPR015680
PANTHER:PTHR18945:SF26 OrthoDB:EOG4GMSC8 EMBL:BT010081
RefSeq:NP_572194.1 UniGene:Dm.13225 SMR:Q9W4G1 STRING:Q9W4G1
EnsemblMetazoa:FBtr0070721 GeneID:31419 KEGG:dme:Dmel_CG6927
UCSC:CG6927-RA FlyBase:FBgn0029733 eggNOG:NOG280114
InParanoid:Q9W4G1 OMA:QNLEAHD GenomeRNAi:31419 NextBio:773562
Uniprot:Q9W4G1
Length = 524
Score = 332 (121.9 bits), Expect = 1.4e-32, Sum P(2) = 1.4e-32
Identities = 61/103 (59%), Positives = 74/103 (71%)
Query: 100 YSSLTLTFILNRQYGFYLMDFYAPSILLVCISWVSFWMAPDAVPGRTILGASTMLTFFQL 159
YSSL+ T L R GFYLMD++ PS+L+V ISWVSFW+ D P R LG ST+LTF L
Sbjct: 248 YSSLSFTVHLTRVVGFYLMDYFLPSMLIVAISWVSFWLQADQAPPRITLGTSTLLTFITL 307
Query: 160 GIETGSSLPNVSYIRSNDVWFFACTVFIFLSLAEFAFVNTIWR 202
G +LP VSYI+ ++VWF CT+FIF S+ EFAFVNTIWR
Sbjct: 308 ASAQGKTLPKVSYIKVSEVWFLGCTIFIFGSMVEFAFVNTIWR 350
Score = 209 (78.6 bits), Expect = 3.8e-16, P = 3.8e-16
Identities = 42/117 (35%), Positives = 72/117 (61%)
Query: 18 EFKVQLLLQLHWKDPRLEYRHYAPHITE-MVGERNFIQNIWTPHIYLTNERDSLVLGLYR 76
+FK+ LLQ+ + DPRL +R+ +P + ++GE + ++W PHI+L NERDS +LGL
Sbjct: 87 QFKIYALLQMRYLDPRLNFRNVSPKRRQPILGEEHLRNSLWMPHIFLANERDSSILGLTE 146
Query: 77 RDMLVSILPDGDMLFSTRSRAYMYSSLTLT-FILNRQYGFYLMDFYAPSILLVCISW 132
+D+L SI PDG ++ S R +A +Y L L F + Q+ +++ + + + + W
Sbjct: 147 KDILTSISPDGTVIVSNRIKATLYCWLNLKKFPFDEQHCSTVLESWMYNTSELVLHW 203
Score = 46 (21.3 bits), Expect = 1.4e-32, Sum P(2) = 1.4e-32
Identities = 11/28 (39%), Positives = 16/28 (57%)
Query: 25 LQLHWKDPRLEYRHYAPHITEMVGERNF 52
L LHW+ R A H+TE V +R++
Sbjct: 199 LVLHWEQKRPITYDGALHLTEFVLQRSW 226
>UNIPROTKB|F1MNR0 [details] [associations]
symbol:GLRA3 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0045211 "postsynaptic membrane" evidence=IEA]
[GO:0030054 "cell junction" evidence=IEA] [GO:0022824
"transmitter-gated ion channel activity" evidence=IEA] [GO:0016594
"glycine binding" evidence=IEA] [GO:0005887 "integral to plasma
membrane" evidence=IEA] [GO:0005230 "extracellular ligand-gated ion
channel activity" evidence=IEA] InterPro:IPR006028
InterPro:IPR006029 InterPro:IPR006201 InterPro:IPR006202
InterPro:IPR008127 InterPro:IPR018000 Pfam:PF02931 Pfam:PF02932
PRINTS:PR00252 PRINTS:PR00253 PRINTS:PR01673 PROSITE:PS00236
GO:GO:0005887 GO:GO:0030054 GO:GO:0045211 GO:GO:0005230
Gene3D:2.70.170.10 PANTHER:PTHR18945 SUPFAM:SSF90112
SUPFAM:SSF63712 TIGRFAMs:TIGR00860 GeneTree:ENSGT00550000074453
GO:GO:0016594 GO:GO:0022824 OMA:PKNSDEM EMBL:DAAA02021900
EMBL:DAAA02021901 IPI:IPI00923967 Ensembl:ENSBTAT00000061342
Uniprot:F1MNR0
Length = 375
Score = 246 (91.7 bits), Expect = 5.7e-31, Sum P(2) = 5.7e-31
Identities = 46/116 (39%), Positives = 72/116 (62%)
Query: 88 DMLFSTRS-RAYMYSSLTLTFILNRQYGFYLMDFYAPSILLVCISWVSFWMAPDAVPGRT 146
D+ + T+ ++ + + F L RQ G+YL+ Y PS+L+V +SWVSFW+ DA P R
Sbjct: 140 DLRYCTKHYNTGKFTCIEVRFHLERQMGYYLIQMYIPSLLIVILSWVSFWINMDAAPARV 199
Query: 147 ILGASTMLTFFQLGIETGSSLPNVSYIRSNDVWFFACTVFIFLSLAEFAFVNTIWR 202
LG +T+LT + +SLP VSY+++ D+W C +F+F +L E+A VN + R
Sbjct: 200 ALGITTVLTMTTQSSGSRASLPKVSYVKAIDIWMAVCLLFVFSALLEYAAVNFVSR 255
Score = 112 (44.5 bits), Expect = 5.7e-31, Sum P(2) = 5.7e-31
Identities = 21/78 (26%), Positives = 43/78 (55%)
Query: 17 QEFKVQLLLQLHWKDPRLEYRHYAPHITEMVGERNFIQNIWTPHIYLTNERDSLVLGLYR 76
Q+++V + L+ W DPRL Y Y ++ + + + +IW P ++ NE+ + +
Sbjct: 2 QDYRVNIFLRQKWNDPRLAYSEYPDDSLDL--DPSMLDSIWKPDLFFANEKGANFHEVTT 59
Query: 77 RDMLVSILPDGDMLFSTR 94
+ L+ I +G++L+S R
Sbjct: 60 DNKLLRIFKNGNVLYSIR 77
>UNIPROTKB|F1RJ16 [details] [associations]
symbol:GLRA3 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0045211 "postsynaptic membrane" evidence=IEA]
[GO:0030054 "cell junction" evidence=IEA] [GO:0022824
"transmitter-gated ion channel activity" evidence=IEA] [GO:0016594
"glycine binding" evidence=IEA] [GO:0005887 "integral to plasma
membrane" evidence=IEA] [GO:0005230 "extracellular ligand-gated ion
channel activity" evidence=IEA] InterPro:IPR006028
InterPro:IPR006029 InterPro:IPR006201 InterPro:IPR006202
InterPro:IPR008127 InterPro:IPR018000 Pfam:PF02931 Pfam:PF02932
PRINTS:PR00252 PRINTS:PR00253 PRINTS:PR01673 PROSITE:PS00236
GO:GO:0005887 GO:GO:0030054 GO:GO:0045211 GO:GO:0005230
Gene3D:2.70.170.10 PANTHER:PTHR18945 SUPFAM:SSF90112
SUPFAM:SSF63712 TIGRFAMs:TIGR00860 GeneTree:ENSGT00550000074453
GO:GO:0016594 GO:GO:0022824 OMA:PKNSDEM EMBL:CT737274 EMBL:CT841549
Ensembl:ENSSSCT00000010633 Uniprot:F1RJ16
Length = 376
Score = 246 (91.7 bits), Expect = 5.9e-31, Sum P(2) = 5.9e-31
Identities = 46/116 (39%), Positives = 72/116 (62%)
Query: 88 DMLFSTRS-RAYMYSSLTLTFILNRQYGFYLMDFYAPSILLVCISWVSFWMAPDAVPGRT 146
D+ + T+ ++ + + F L RQ G+YL+ Y PS+L+V +SWVSFW+ DA P R
Sbjct: 139 DLRYCTKHYNTGKFTCIEVRFHLERQMGYYLIQMYIPSLLIVILSWVSFWINMDAAPARV 198
Query: 147 ILGASTMLTFFQLGIETGSSLPNVSYIRSNDVWFFACTVFIFLSLAEFAFVNTIWR 202
LG +T+LT + +SLP VSY+++ D+W C +F+F +L E+A VN + R
Sbjct: 199 ALGITTVLTMTTQSSGSRASLPKVSYVKAIDIWMAVCLLFVFSALLEYAAVNFVSR 254
Score = 112 (44.5 bits), Expect = 5.9e-31, Sum P(2) = 5.9e-31
Identities = 21/78 (26%), Positives = 43/78 (55%)
Query: 17 QEFKVQLLLQLHWKDPRLEYRHYAPHITEMVGERNFIQNIWTPHIYLTNERDSLVLGLYR 76
Q+++V + L+ W DPRL Y Y ++ + + + +IW P ++ NE+ + +
Sbjct: 1 QDYRVNIFLRQKWNDPRLAYSEYPDDSLDL--DPSMLDSIWKPDLFFANEKGANFHEVTT 58
Query: 77 RDMLVSILPDGDMLFSTR 94
+ L+ I +G++L+S R
Sbjct: 59 DNKLLRIFKNGNVLYSIR 76
>FB|FBgn0036727 [details] [associations]
symbol:CG7589 species:7227 "Drosophila melanogaster"
[GO:0016933 "extracellular-glycine-gated ion channel activity"
evidence=ISS] [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0045211 "postsynaptic membrane" evidence=IEA] [GO:0006811 "ion
transport" evidence=IEA] [GO:0006911 "phagocytosis, engulfment"
evidence=IMP] InterPro:IPR006028 InterPro:IPR006029
InterPro:IPR006201 InterPro:IPR006202 InterPro:IPR018000
Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252 PRINTS:PR00253
PROSITE:PS00236 GO:GO:0016021 GO:GO:0005886 GO:GO:0006911
EMBL:AE014296 GO:GO:0030054 GO:GO:0045211 GO:GO:0005230
Gene3D:2.70.170.10 PANTHER:PTHR18945 SUPFAM:SSF90112
SUPFAM:SSF63712 GeneTree:ENSGT00540000070314 InterPro:IPR015680
PANTHER:PTHR18945:SF26 EMBL:BT022869 EMBL:BT022900
RefSeq:NP_648984.2 UniGene:Dm.27164 SMR:Q9VVH4
EnsemblMetazoa:FBtr0075221 EnsemblMetazoa:FBtr0333690 GeneID:39949
KEGG:dme:Dmel_CG7589 UCSC:CG7589-RA FlyBase:FBgn0036727
InParanoid:Q9VVH4 OMA:ASPPRIM OrthoDB:EOG4GMSC8 GenomeRNAi:39949
NextBio:816227 Uniprot:Q9VVH4
Length = 509
Score = 336 (123.3 bits), Expect = 2.9e-30, P = 2.9e-30
Identities = 67/119 (56%), Positives = 82/119 (68%)
Query: 86 DGDMLFSTRSRAYM--YSSLTLTFILNRQYGFYLMDFYAPSILLVCISWVSFWMAPDAVP 143
DGD L R A+ YSSL+ T L R+ GFYL+D+Y PS+++V ISWVSFW+ DA P
Sbjct: 241 DGDNL---RHGAFAGNYSSLSFTVNLKREIGFYLLDYYLPSMMIVAISWVSFWLQADASP 297
Query: 144 GRTILGASTMLTFFQLGIETGSSLPNVSYIRSNDVWFFACTVFIFLSLAEFAFVNTIWR 202
R +LG STML+F L +LP VSYI+ ++VWF CT FIF SL EFAFVNTIWR
Sbjct: 298 PRIMLGTSTMLSFITLSSSQSKNLPKVSYIKVSEVWFLGCTFFIFGSLVEFAFVNTIWR 356
Score = 180 (68.4 bits), Expect = 4.9e-13, P = 4.9e-13
Identities = 34/116 (29%), Positives = 70/116 (60%)
Query: 18 EFKVQLLLQLHWKDPRLEYRHYAPHITEMVGERNFIQNIWTPHIYLTNERDSLVLGLYRR 77
+FK+ LLQL ++D RL Y+ + ++G+++ + +W PHI+ NER+S +LG +
Sbjct: 95 QFKMHALLQLRFQDKRLAYKAFN-RSDNILGQKHLSERLWLPHIFFANERESSILGTDEK 153
Query: 78 DMLVSILPDGDMLFSTRSRAYMYSSLTLT-FILNRQYGFYLMDFYAPSILLVCISW 132
D+L S+ P+G+++ STR +A +Y + F ++Q+ +++ + + + + W
Sbjct: 154 DVLTSLSPEGNVIISTRMQASLYCWMNFQKFPFDQQFCSTVLESWMYNTSDLILEW 209
>UNIPROTKB|Q5JXX5 [details] [associations]
symbol:GLRA4 "Glycine receptor subunit alpha-4"
species:9606 "Homo sapiens" [GO:0005230 "extracellular ligand-gated
ion channel activity" evidence=IEA] [GO:0005887 "integral to plasma
membrane" evidence=IEA] [GO:0016594 "glycine binding" evidence=IEA]
[GO:0022824 "transmitter-gated ion channel activity" evidence=IEA]
[GO:0005254 "chloride channel activity" evidence=IEA] [GO:0030054
"cell junction" evidence=IEA] [GO:0034707 "chloride channel
complex" evidence=IEA] [GO:0045211 "postsynaptic membrane"
evidence=IEA] Reactome:REACT_15518 InterPro:IPR006028
InterPro:IPR006029 InterPro:IPR006201 InterPro:IPR006202
InterPro:IPR008127 InterPro:IPR018000 Pfam:PF02931 Pfam:PF02932
PRINTS:PR00252 PRINTS:PR00253 PRINTS:PR01673 PROSITE:PS00236
GO:GO:0005887 GO:GO:0030054 GO:GO:0045211 GO:GO:0005230
Gene3D:2.70.170.10 PANTHER:PTHR18945 SUPFAM:SSF90112
SUPFAM:SSF63712 TIGRFAMs:TIGR00860 GO:GO:0034707 GO:GO:0005254
HOVERGEN:HBG051707 eggNOG:NOG265706 HOGENOM:HOG000231336
GO:GO:0016594 GO:GO:0022824 OrthoDB:EOG4WWRJJ EMBL:Z93848
EMBL:AL049610 IPI:IPI00456931 RefSeq:NP_001019623.2
UniGene:Hs.533289 ProteinModelPortal:Q5JXX5 SMR:Q5JXX5
STRING:Q5JXX5 PhosphoSite:Q5JXX5 DMDM:262527577 PRIDE:Q5JXX5
Ensembl:ENST00000372617 GeneID:441509 KEGG:hsa:441509
UCSC:uc010nou.2 CTD:441509 GeneCards:GC0XM102962 HGNC:HGNC:31715
HPA:HPA044759 neXtProt:NX_Q5JXX5 PharmGKB:PA142671731
InParanoid:Q5JXX5 KO:K05271 OMA:IQESRFY GenomeRNAi:441509
NextBio:110250 ArrayExpress:Q5JXX5 Bgee:Q5JXX5 CleanEx:HS_GLRA4
Genevestigator:Q5JXX5 Uniprot:Q5JXX5
Length = 417
Score = 242 (90.2 bits), Expect = 4.1e-30, Sum P(2) = 4.1e-30
Identities = 43/103 (41%), Positives = 67/103 (65%)
Query: 100 YSSLTLTFILNRQYGFYLMDFYAPSILLVCISWVSFWMAPDAVPGRTILGASTMLTFFQL 159
++ + + F L RQ G+YL+ Y PS+L+V +SWVSFW+ DA P R LG +T+LT
Sbjct: 242 FTCIEVKFHLERQMGYYLIQMYIPSLLIVILSWVSFWINMDAAPARVGLGITTVLTMTTQ 301
Query: 160 GIETGSSLPNVSYIRSNDVWFFACTVFIFLSLAEFAFVNTIWR 202
+ +SLP VSY+++ D+W C +F+F +L E+A +N + R
Sbjct: 302 SSGSRASLPKVSYVKAIDIWMAVCLLFVFAALLEYAAINFVSR 344
Score = 114 (45.2 bits), Expect = 4.1e-30, Sum P(2) = 4.1e-30
Identities = 21/77 (27%), Positives = 43/77 (55%)
Query: 18 EFKVQLLLQLHWKDPRLEYRHYAPHITEMVGERNFIQNIWTPHIYLTNERDSLVLGLYRR 77
+++V + L+ W DPRL YR Y ++ + + + +IW P ++ NE+ + +
Sbjct: 91 DYRVNVFLRQQWNDPRLSYREYPDDSLDL--DPSMLDSIWKPDLFFANEKGANFHEVTTD 148
Query: 78 DMLVSILPDGDMLFSTR 94
+ L+ I +G++L+S R
Sbjct: 149 NKLLRIFKNGNVLYSIR 165
>ZFIN|ZDB-GENE-020402-1 [details] [associations]
symbol:glra3 "glycine receptor, alpha 3" species:7955
"Danio rerio" [GO:0016594 "glycine binding" evidence=IEA]
[GO:0005230 "extracellular ligand-gated ion channel activity"
evidence=IEA] [GO:0006810 "transport" evidence=IEA] [GO:0006811
"ion transport" evidence=IEA] [GO:0016020 "membrane" evidence=IEA]
[GO:0016021 "integral to membrane" evidence=IEA] [GO:0022824
"transmitter-gated ion channel activity" evidence=IEA] [GO:0045211
"postsynaptic membrane" evidence=IEA] [GO:0005887 "integral to
plasma membrane" evidence=IEA] [GO:0030054 "cell junction"
evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0045202 "synapse" evidence=IEA] InterPro:IPR006028
InterPro:IPR006029 InterPro:IPR006201 InterPro:IPR006202
InterPro:IPR008127 InterPro:IPR018000 Pfam:PF02931 Pfam:PF02932
PRINTS:PR00252 PRINTS:PR00253 PRINTS:PR01673 PROSITE:PS00236
ZFIN:ZDB-GENE-020402-1 GO:GO:0005887 GO:GO:0030054 GO:GO:0045211
GO:GO:0005230 Gene3D:2.70.170.10 PANTHER:PTHR18945 SUPFAM:SSF90112
SUPFAM:SSF63712 TIGRFAMs:TIGR00860 HOVERGEN:HBG051707 HSSP:P23415
KO:K05195 GO:GO:0016594 GO:GO:0022824 CTD:8001 EMBL:AJ308516
IPI:IPI00500173 RefSeq:NP_694497.1 UniGene:Dr.12384
ProteinModelPortal:Q90W14 SMR:Q90W14 GeneID:192124 KEGG:dre:192124
NextBio:20797134 Uniprot:Q90W14
Length = 450
Score = 250 (93.1 bits), Expect = 5.2e-30, Sum P(2) = 5.2e-30
Identities = 49/122 (40%), Positives = 75/122 (61%)
Query: 83 ILPD-GDMLFSTRS-RAYMYSSLTLTFILNRQYGFYLMDFYAPSILLVCISWVSFWMAPD 140
IL D D+ + T+ ++ + + F L RQ G+YL+ Y PS+L+V +SWVSFW+ D
Sbjct: 221 ILKDESDLRYCTKHYNTGKFTCIEVRFHLERQMGYYLIQMYIPSLLIVILSWVSFWINMD 280
Query: 141 AVPGRTILGASTMLTFFQLGIETGSSLPNVSYIRSNDVWFFACTVFIFLSLAEFAFVNTI 200
A P R LG +T+LT + +SLP VSY+++ D+W C +F+F +L E+A VN +
Sbjct: 281 AAPARVALGITTVLTMTTQSSGSRTSLPKVSYVKAIDIWMAVCLLFVFSALLEYAAVNFV 340
Query: 201 WR 202
R
Sbjct: 341 SR 342
Score = 107 (42.7 bits), Expect = 5.2e-30, Sum P(2) = 5.2e-30
Identities = 20/77 (25%), Positives = 42/77 (54%)
Query: 18 EFKVQLLLQLHWKDPRLEYRHYAPHITEMVGERNFIQNIWTPHIYLTNERDSLVLGLYRR 77
+++V + L+ W DPRL Y Y ++ + + + +IW P ++ NE+ + +
Sbjct: 90 DYRVNIFLRQKWNDPRLAYSEYPDDSLDL--DPSMLDSIWKPDLFFANEKGAHFHEVTTD 147
Query: 78 DMLVSILPDGDMLFSTR 94
+ L+ I +G++L+S R
Sbjct: 148 NKLLRIFKNGNVLYSIR 164
>UNIPROTKB|F1Q2X8 [details] [associations]
symbol:GLRA3 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0045211 "postsynaptic membrane" evidence=IEA]
[GO:0030054 "cell junction" evidence=IEA] [GO:0022824
"transmitter-gated ion channel activity" evidence=IEA] [GO:0016594
"glycine binding" evidence=IEA] [GO:0005887 "integral to plasma
membrane" evidence=IEA] [GO:0005230 "extracellular ligand-gated ion
channel activity" evidence=IEA] InterPro:IPR006028
InterPro:IPR006029 InterPro:IPR006201 InterPro:IPR006202
InterPro:IPR008127 InterPro:IPR018000 Pfam:PF02931 Pfam:PF02932
PRINTS:PR00252 PRINTS:PR00253 PRINTS:PR01673 PROSITE:PS00236
GO:GO:0005887 GO:GO:0030054 GO:GO:0045211 GO:GO:0005230
Gene3D:2.70.170.10 PANTHER:PTHR18945 SUPFAM:SSF90112
SUPFAM:SSF63712 TIGRFAMs:TIGR00860 GeneTree:ENSGT00550000074453
GO:GO:0016594 GO:GO:0022824 EMBL:AAEX03014316
Ensembl:ENSCAFT00000012641 Ensembl:ENSCAFT00000043558
Uniprot:F1Q2X8
Length = 409
Score = 246 (91.7 bits), Expect = 6.2e-30, Sum P(2) = 6.2e-30
Identities = 46/116 (39%), Positives = 72/116 (62%)
Query: 88 DMLFSTRS-RAYMYSSLTLTFILNRQYGFYLMDFYAPSILLVCISWVSFWMAPDAVPGRT 146
D+ + T+ ++ + + F L RQ G+YL+ Y PS+L+V +SWVSFW+ DA P R
Sbjct: 187 DLRYCTKHYNTGKFTCIEVRFHLERQMGYYLIQMYIPSLLIVILSWVSFWINMDAAPARV 246
Query: 147 ILGASTMLTFFQLGIETGSSLPNVSYIRSNDVWFFACTVFIFLSLAEFAFVNTIWR 202
LG +T+LT + +SLP VSY+++ D+W C +F+F +L E+A VN + R
Sbjct: 247 ALGITTVLTMTTQSSGSRASLPKVSYVKAIDIWMAVCLLFVFSALLEYAAVNFVSR 302
Score = 107 (42.7 bits), Expect = 6.2e-30, Sum P(2) = 6.2e-30
Identities = 20/77 (25%), Positives = 42/77 (54%)
Query: 18 EFKVQLLLQLHWKDPRLEYRHYAPHITEMVGERNFIQNIWTPHIYLTNERDSLVLGLYRR 77
+++V + L+ W DPRL Y Y ++ + + + +IW P ++ NE+ + +
Sbjct: 50 DYRVNIFLRQKWNDPRLAYSEYPDDSLDL--DPSMLDSIWKPDLFFANEKGANFHEVTTD 107
Query: 78 DMLVSILPDGDMLFSTR 94
+ L+ I +G++L+S R
Sbjct: 108 NKLLRIFKNGNVLYSIR 124
>UNIPROTKB|Q14C71 [details] [associations]
symbol:GLRA1 "GLRA1 protein" species:9606 "Homo sapiens"
[GO:0005230 "extracellular ligand-gated ion channel activity"
evidence=IEA] [GO:0005887 "integral to plasma membrane"
evidence=IEA] [GO:0016594 "glycine binding" evidence=IEA]
[GO:0022824 "transmitter-gated ion channel activity" evidence=IEA]
[GO:0030054 "cell junction" evidence=IEA] [GO:0045211 "postsynaptic
membrane" evidence=IEA] InterPro:IPR006028 InterPro:IPR006029
InterPro:IPR006201 InterPro:IPR006202 InterPro:IPR008127
InterPro:IPR018000 Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252
PRINTS:PR00253 PRINTS:PR01673 PROSITE:PS00236 GO:GO:0005887
GO:GO:0030054 GO:GO:0045211 GO:GO:0005230 Gene3D:2.70.170.10
PANTHER:PTHR18945 SUPFAM:SSF90112 SUPFAM:SSF63712
TIGRFAMs:TIGR00860 HOVERGEN:HBG051707 HOGENOM:HOG000231336
OrthoDB:EOG4TF0KF GO:GO:0016594 GO:GO:0022824 UniGene:Hs.121490
HGNC:HGNC:4326 EMBL:AC091982 EMBL:AC010312 EMBL:BC114967
IPI:IPI01014809 SMR:Q14C71 STRING:Q14C71 Ensembl:ENST00000545569
UCSC:uc003lus.3 Uniprot:Q14C71
Length = 366
Score = 240 (89.5 bits), Expect = 7.6e-30, Sum P(2) = 7.6e-30
Identities = 45/116 (38%), Positives = 71/116 (61%)
Query: 88 DMLFSTRS-RAYMYSSLTLTFILNRQYGFYLMDFYAPSILLVCISWVSFWMAPDAVPGRT 146
D+ + T+ ++ + F L RQ G+YL+ Y PS+L+V +SW+SFW+ DA P R
Sbjct: 139 DLRYCTKHYNTGKFTCIEARFHLERQMGYYLIQMYIPSLLIVILSWISFWINMDAAPARV 198
Query: 147 ILGASTMLTFFQLGIETGSSLPNVSYIRSNDVWFFACTVFIFLSLAEFAFVNTIWR 202
LG +T+LT + +SLP VSY+++ D+W C +F+F +L E+A VN + R
Sbjct: 199 GLGITTVLTMTTQSSGSRASLPKVSYVKAIDIWMAVCLLFVFSALLEYAAVNFVSR 254
Score = 107 (42.7 bits), Expect = 7.6e-30, Sum P(2) = 7.6e-30
Identities = 20/77 (25%), Positives = 42/77 (54%)
Query: 18 EFKVQLLLQLHWKDPRLEYRHYAPHITEMVGERNFIQNIWTPHIYLTNERDSLVLGLYRR 77
+++V + L+ W DPRL Y Y ++ + + + +IW P ++ NE+ + +
Sbjct: 2 DYRVNIFLRQQWNDPRLAYNEYPDDSLDL--DPSMLDSIWKPDLFFANEKGAHFHEITTD 59
Query: 78 DMLVSILPDGDMLFSTR 94
+ L+ I +G++L+S R
Sbjct: 60 NKLLRISRNGNVLYSIR 76
>MGI|MGI:95750 [details] [associations]
symbol:Glra4 "glycine receptor, alpha 4 subunit" species:10090
"Mus musculus" [GO:0005216 "ion channel activity" evidence=IEA]
[GO:0005230 "extracellular ligand-gated ion channel activity"
evidence=IEA] [GO:0005254 "chloride channel activity" evidence=IEA]
[GO:0005886 "plasma membrane" evidence=IEA] [GO:0005887 "integral
to plasma membrane" evidence=IEA] [GO:0006810 "transport"
evidence=IEA] [GO:0006811 "ion transport" evidence=IEA] [GO:0006821
"chloride transport" evidence=IEA] [GO:0016020 "membrane"
evidence=IEA] [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0016594 "glycine binding" evidence=IEA] [GO:0022824
"transmitter-gated ion channel activity" evidence=IEA] [GO:0030054
"cell junction" evidence=IEA] [GO:0034707 "chloride channel
complex" evidence=IEA] [GO:0045202 "synapse" evidence=IEA]
[GO:0045211 "postsynaptic membrane" evidence=IEA]
InterPro:IPR006028 InterPro:IPR006029 InterPro:IPR006201
InterPro:IPR006202 InterPro:IPR008127 InterPro:IPR018000
Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252 PRINTS:PR00253
PRINTS:PR01673 PROSITE:PS00236 MGI:MGI:95750 GO:GO:0005887
GO:GO:0030054 GO:GO:0045211 GO:GO:0005230 Gene3D:2.70.170.10
PANTHER:PTHR18945 SUPFAM:SSF90112 SUPFAM:SSF63712
TIGRFAMs:TIGR00860 GO:GO:0034707 GO:GO:0005254 HOVERGEN:HBG051707
eggNOG:NOG265706 GeneTree:ENSGT00550000074453 HOGENOM:HOG000231336
GO:GO:0016594 GO:GO:0022824 OrthoDB:EOG4WWRJJ CTD:441509 KO:K05271
EMBL:DQ109809 EMBL:AL671887 EMBL:X75850 EMBL:X75851 EMBL:X75852
EMBL:X75853 EMBL:AF462147 IPI:IPI00474759 PIR:A49970
RefSeq:NP_034427.2 UniGene:Mm.215168 ProteinModelPortal:Q61603
SMR:Q61603 PhosphoSite:Q61603 PRIDE:Q61603
Ensembl:ENSMUST00000018739 GeneID:14657 KEGG:mmu:14657
UCSC:uc007izn.1 InParanoid:A2AEA9 BindingDB:Q61603
ChEMBL:CHEMBL3500 NextBio:286518 Bgee:Q61603 CleanEx:MM_GLRA4
Genevestigator:Q61603 GermOnline:ENSMUSG00000018595 Uniprot:Q61603
Length = 456
Score = 243 (90.6 bits), Expect = 8.4e-30, Sum P(2) = 8.4e-30
Identities = 44/103 (42%), Positives = 67/103 (65%)
Query: 100 YSSLTLTFILNRQYGFYLMDFYAPSILLVCISWVSFWMAPDAVPGRTILGASTMLTFFQL 159
++ + + F L RQ G+YL+ Y PS+L+V +SWVSFW+ DA P R LG +T+LT
Sbjct: 241 FTCIEVKFHLERQMGYYLIQMYIPSLLIVILSWVSFWINMDAAPARVGLGITTVLTMTTQ 300
Query: 160 GIETGSSLPNVSYIRSNDVWFFACTVFIFLSLAEFAFVNTIWR 202
+ +SLP VSY+++ D+W C +F+F +L E+A VN + R
Sbjct: 301 SSGSRASLPKVSYVKAIDIWMAVCLLFVFAALLEYAAVNFVSR 343
Score = 113 (44.8 bits), Expect = 8.4e-30, Sum P(2) = 8.4e-30
Identities = 21/77 (27%), Positives = 43/77 (55%)
Query: 18 EFKVQLLLQLHWKDPRLEYRHYAPHITEMVGERNFIQNIWTPHIYLTNERDSLVLGLYRR 77
+++V + L+ W DPRL YR Y ++ + + + +IW P ++ NE+ + +
Sbjct: 90 DYRVNVFLRQQWNDPRLAYREYPDDSLDL--DPSMLDSIWKPDLFFANEKGANFHEVTTD 147
Query: 78 DMLVSILPDGDMLFSTR 94
+ L+ I +G++L+S R
Sbjct: 148 NKLLRIFKNGNVLYSIR 164
>RGD|1564103 [details] [associations]
symbol:Glra4 "glycine receptor, alpha 4" species:10116 "Rattus
norvegicus" [GO:0005230 "extracellular ligand-gated ion channel
activity" evidence=IEA] [GO:0005887 "integral to plasma membrane"
evidence=IEA] [GO:0016594 "glycine binding" evidence=IEA]
[GO:0022824 "transmitter-gated ion channel activity" evidence=IEA]
[GO:0030054 "cell junction" evidence=IEA] [GO:0045211 "postsynaptic
membrane" evidence=IEA] InterPro:IPR006028 InterPro:IPR006029
InterPro:IPR006201 InterPro:IPR006202 InterPro:IPR008127
InterPro:IPR018000 Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252
PRINTS:PR00253 PRINTS:PR01673 PROSITE:PS00236 RGD:1564103
GO:GO:0005887 GO:GO:0030054 GO:GO:0045211 GO:GO:0005230
Gene3D:2.70.170.10 PANTHER:PTHR18945 SUPFAM:SSF90112
SUPFAM:SSF63712 TIGRFAMs:TIGR00860 GeneTree:ENSGT00550000074453
GO:GO:0016594 GO:GO:0022824 OrthoDB:EOG4WWRJJ CTD:441509 KO:K05271
OMA:IQESRFY IPI:IPI00361637 RefSeq:NP_001178843.1 UniGene:Rn.228202
ProteinModelPortal:D4A4R5 Ensembl:ENSRNOT00000052302 GeneID:367912
KEGG:rno:367912 UCSC:RGD:1564103 NextBio:691840 ArrayExpress:D4A4R5
Uniprot:D4A4R5
Length = 456
Score = 243 (90.6 bits), Expect = 8.4e-30, Sum P(2) = 8.4e-30
Identities = 44/103 (42%), Positives = 67/103 (65%)
Query: 100 YSSLTLTFILNRQYGFYLMDFYAPSILLVCISWVSFWMAPDAVPGRTILGASTMLTFFQL 159
++ + + F L RQ G+YL+ Y PS+L+V +SWVSFW+ DA P R LG +T+LT
Sbjct: 241 FTCIEVKFHLERQMGYYLIQMYIPSLLIVILSWVSFWINMDAAPARVGLGITTVLTMTTQ 300
Query: 160 GIETGSSLPNVSYIRSNDVWFFACTVFIFLSLAEFAFVNTIWR 202
+ +SLP VSY+++ D+W C +F+F +L E+A VN + R
Sbjct: 301 SSGSRASLPKVSYVKAIDIWMAVCLLFVFAALLEYAAVNFVSR 343
Score = 113 (44.8 bits), Expect = 8.4e-30, Sum P(2) = 8.4e-30
Identities = 21/77 (27%), Positives = 43/77 (55%)
Query: 18 EFKVQLLLQLHWKDPRLEYRHYAPHITEMVGERNFIQNIWTPHIYLTNERDSLVLGLYRR 77
+++V + L+ W DPRL YR Y ++ + + + +IW P ++ NE+ + +
Sbjct: 90 DYRVNVFLRQQWNDPRLAYREYPDDSLDL--DPSMLDSIWKPDLFFANEKGANFHEVTTD 147
Query: 78 DMLVSILPDGDMLFSTR 94
+ L+ I +G++L+S R
Sbjct: 148 NKLLRIFKNGNVLYSIR 164
>UNIPROTKB|E1BHI1 [details] [associations]
symbol:GLRA4 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0045211 "postsynaptic membrane" evidence=IEA]
[GO:0030054 "cell junction" evidence=IEA] [GO:0022824
"transmitter-gated ion channel activity" evidence=IEA] [GO:0016594
"glycine binding" evidence=IEA] [GO:0005887 "integral to plasma
membrane" evidence=IEA] [GO:0005230 "extracellular ligand-gated ion
channel activity" evidence=IEA] InterPro:IPR006028
InterPro:IPR006029 InterPro:IPR006201 InterPro:IPR006202
InterPro:IPR008127 InterPro:IPR018000 Pfam:PF02931 Pfam:PF02932
PRINTS:PR00252 PRINTS:PR00253 PRINTS:PR01673 PROSITE:PS00236
GO:GO:0005887 GO:GO:0030054 GO:GO:0045211 GO:GO:0005230
Gene3D:2.70.170.10 PANTHER:PTHR18945 SUPFAM:SSF90112
SUPFAM:SSF63712 TIGRFAMs:TIGR00860 GeneTree:ENSGT00550000074453
GO:GO:0016594 GO:GO:0022824 OMA:IQESRFY EMBL:DAAA02071337
EMBL:DAAA02071338 IPI:IPI00708020 Ensembl:ENSBTAT00000022870
Uniprot:E1BHI1
Length = 457
Score = 243 (90.6 bits), Expect = 8.6e-30, Sum P(2) = 8.6e-30
Identities = 44/103 (42%), Positives = 67/103 (65%)
Query: 100 YSSLTLTFILNRQYGFYLMDFYAPSILLVCISWVSFWMAPDAVPGRTILGASTMLTFFQL 159
++ + + F L RQ G+YL+ Y PS+L+V +SWVSFW+ DA P R LG +T+LT
Sbjct: 242 FTCIEVKFHLERQMGYYLIQMYIPSLLIVILSWVSFWINMDAAPARVGLGITTVLTMTTQ 301
Query: 160 GIETGSSLPNVSYIRSNDVWFFACTVFIFLSLAEFAFVNTIWR 202
+ +SLP VSY+++ D+W C +F+F +L E+A VN + R
Sbjct: 302 SSGSRASLPKVSYVKAIDIWMAVCLLFVFAALLEYAAVNFVSR 344
Score = 113 (44.8 bits), Expect = 8.6e-30, Sum P(2) = 8.6e-30
Identities = 21/77 (27%), Positives = 43/77 (55%)
Query: 18 EFKVQLLLQLHWKDPRLEYRHYAPHITEMVGERNFIQNIWTPHIYLTNERDSLVLGLYRR 77
+++V + L+ W DPRL YR Y ++ + + + +IW P ++ NE+ + +
Sbjct: 91 DYRVNVFLRQQWNDPRLAYREYPDDSLDL--DPSMLDSIWKPDLFFANEKGANFHEVTTD 148
Query: 78 DMLVSILPDGDMLFSTR 94
+ L+ I +G++L+S R
Sbjct: 149 NKLLRIFKNGNVLYSIR 165
>UNIPROTKB|F1RYC5 [details] [associations]
symbol:LOC100525376 "Uncharacterized protein" species:9823
"Sus scrofa" [GO:0045211 "postsynaptic membrane" evidence=IEA]
[GO:0030054 "cell junction" evidence=IEA] [GO:0022824
"transmitter-gated ion channel activity" evidence=IEA] [GO:0016594
"glycine binding" evidence=IEA] [GO:0005887 "integral to plasma
membrane" evidence=IEA] [GO:0005230 "extracellular ligand-gated ion
channel activity" evidence=IEA] InterPro:IPR006028
InterPro:IPR006029 InterPro:IPR006201 InterPro:IPR006202
InterPro:IPR008127 InterPro:IPR018000 Pfam:PF02931 Pfam:PF02932
PRINTS:PR00252 PRINTS:PR00253 PRINTS:PR01673 PROSITE:PS00236
GO:GO:0005887 GO:GO:0030054 GO:GO:0045211 GO:GO:0005230
Gene3D:2.70.170.10 PANTHER:PTHR18945 SUPFAM:SSF90112
SUPFAM:SSF63712 TIGRFAMs:TIGR00860 GeneTree:ENSGT00550000074453
GO:GO:0016594 GO:GO:0022824 KO:K05271 EMBL:FP015842 EMBL:FP326726
RefSeq:XP_003135319.1 UniGene:Ssc.93565 Ensembl:ENSSSCT00000013704
GeneID:100525376 KEGG:ssc:100525376 OMA:FYFASLC Uniprot:F1RYC5
Length = 457
Score = 243 (90.6 bits), Expect = 8.6e-30, Sum P(2) = 8.6e-30
Identities = 44/103 (42%), Positives = 67/103 (65%)
Query: 100 YSSLTLTFILNRQYGFYLMDFYAPSILLVCISWVSFWMAPDAVPGRTILGASTMLTFFQL 159
++ + + F L RQ G+YL+ Y PS+L+V +SWVSFW+ DA P R LG +T+LT
Sbjct: 242 FTCIEVKFHLERQMGYYLIQMYIPSLLIVILSWVSFWINMDAAPARVGLGITTVLTMTTQ 301
Query: 160 GIETGSSLPNVSYIRSNDVWFFACTVFIFLSLAEFAFVNTIWR 202
+ +SLP VSY+++ D+W C +F+F +L E+A VN + R
Sbjct: 302 SSGSRASLPKVSYVKAIDIWMAVCLLFVFAALLEYAAVNFVSR 344
Score = 113 (44.8 bits), Expect = 8.6e-30, Sum P(2) = 8.6e-30
Identities = 21/77 (27%), Positives = 43/77 (55%)
Query: 18 EFKVQLLLQLHWKDPRLEYRHYAPHITEMVGERNFIQNIWTPHIYLTNERDSLVLGLYRR 77
+++V + L+ W DPRL YR Y ++ + + + +IW P ++ NE+ + +
Sbjct: 91 DYRVNVFLRQQWNDPRLAYREYPDDSLDL--DPSMLDSIWKPDLFFANEKGANFHEVTTD 148
Query: 78 DMLVSILPDGDMLFSTR 94
+ L+ I +G++L+S R
Sbjct: 149 NKLLRIFKNGNVLYSIR 165
>UNIPROTKB|F1NMN1 [details] [associations]
symbol:GLRA3 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0005887 "integral to plasma membrane" evidence=IEA]
[GO:0016594 "glycine binding" evidence=IEA] [GO:0016934
"extracellular-glycine-gated chloride channel activity"
evidence=IEA] [GO:0022824 "transmitter-gated ion channel activity"
evidence=IEA] [GO:0030054 "cell junction" evidence=IEA] [GO:0045211
"postsynaptic membrane" evidence=IEA] InterPro:IPR006028
InterPro:IPR006029 InterPro:IPR006201 InterPro:IPR006202
InterPro:IPR008127 InterPro:IPR008130 InterPro:IPR018000
Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252 PRINTS:PR00253
PRINTS:PR01673 PRINTS:PR01676 PROSITE:PS00236 GO:GO:0005887
GO:GO:0030054 GO:GO:0045211 Gene3D:2.70.170.10 PANTHER:PTHR18945
SUPFAM:SSF90112 SUPFAM:SSF63712 TIGRFAMs:TIGR00860 GO:GO:0016934
GeneTree:ENSGT00550000074453 GO:GO:0016594 GO:GO:0022824
EMBL:AC145915 IPI:IPI00572144 Ensembl:ENSGALT00000017534
OMA:HANFHEV Uniprot:F1NMN1
Length = 444
Score = 245 (91.3 bits), Expect = 1.1e-29, Sum P(2) = 1.1e-29
Identities = 44/103 (42%), Positives = 67/103 (65%)
Query: 100 YSSLTLTFILNRQYGFYLMDFYAPSILLVCISWVSFWMAPDAVPGRTILGASTMLTFFQL 159
++ + + F L RQ G+YL+ Y PS+L+V +SWVSFW+ DA P R LG +T+LT
Sbjct: 237 FTCIEVRFHLERQMGYYLIQMYIPSLLIVILSWVSFWINMDAAPARVALGITTVLTMTTQ 296
Query: 160 GIETGSSLPNVSYIRSNDVWFFACTVFIFLSLAEFAFVNTIWR 202
+ +SLP VSY+++ D+W C +F+F +L E+A VN + R
Sbjct: 297 SSGSRASLPKVSYVKAIDIWMAVCLLFVFSALLEYAAVNFVSR 339
Score = 109 (43.4 bits), Expect = 1.1e-29, Sum P(2) = 1.1e-29
Identities = 20/77 (25%), Positives = 43/77 (55%)
Query: 18 EFKVQLLLQLHWKDPRLEYRHYAPHITEMVGERNFIQNIWTPHIYLTNERDSLVLGLYRR 77
+++V + L+ +W DPRL Y Y ++ + + + +IW P ++ NE+ + +
Sbjct: 85 DYRVNIFLRQNWNDPRLAYSEYPDDSLDL--DPSMLDSIWKPDLFFANEKGANFHEVTTD 142
Query: 78 DMLVSILPDGDMLFSTR 94
+ L+ I +G++L+S R
Sbjct: 143 NKLLRIFKNGNVLYSIR 159
>UNIPROTKB|J9P291 [details] [associations]
symbol:GLRA3 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0045211 "postsynaptic membrane" evidence=IEA]
[GO:0030054 "cell junction" evidence=IEA] [GO:0022824
"transmitter-gated ion channel activity" evidence=IEA] [GO:0016934
"extracellular-glycine-gated chloride channel activity"
evidence=IEA] [GO:0016594 "glycine binding" evidence=IEA]
[GO:0005887 "integral to plasma membrane" evidence=IEA]
InterPro:IPR006028 InterPro:IPR006029 InterPro:IPR006201
InterPro:IPR006202 InterPro:IPR008127 InterPro:IPR008130
InterPro:IPR018000 Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252
PRINTS:PR00253 PRINTS:PR01673 PRINTS:PR01676 PROSITE:PS00236
GO:GO:0005887 GO:GO:0030054 GO:GO:0045211 Gene3D:2.70.170.10
PANTHER:PTHR18945 SUPFAM:SSF90112 SUPFAM:SSF63712
TIGRFAMs:TIGR00860 GO:GO:0016934 KO:K05195
GeneTree:ENSGT00550000074453 GO:GO:0016594 GO:GO:0022824 CTD:8001
EMBL:AAEX03014316 GeneID:486074 KEGG:cfa:486074
RefSeq:XP_003433410.1 Ensembl:ENSCAFT00000049653 Uniprot:J9P291
Length = 449
Score = 246 (91.7 bits), Expect = 1.5e-29, Sum P(2) = 1.5e-29
Identities = 46/116 (39%), Positives = 72/116 (62%)
Query: 88 DMLFSTRS-RAYMYSSLTLTFILNRQYGFYLMDFYAPSILLVCISWVSFWMAPDAVPGRT 146
D+ + T+ ++ + + F L RQ G+YL+ Y PS+L+V +SWVSFW+ DA P R
Sbjct: 227 DLRYCTKHYNTGKFTCIEVRFHLERQMGYYLIQMYIPSLLIVILSWVSFWINMDAAPARV 286
Query: 147 ILGASTMLTFFQLGIETGSSLPNVSYIRSNDVWFFACTVFIFLSLAEFAFVNTIWR 202
LG +T+LT + +SLP VSY+++ D+W C +F+F +L E+A VN + R
Sbjct: 287 ALGITTVLTMTTQSSGSRASLPKVSYVKAIDIWMAVCLLFVFSALLEYAAVNFVSR 342
Score = 107 (42.7 bits), Expect = 1.5e-29, Sum P(2) = 1.5e-29
Identities = 20/77 (25%), Positives = 42/77 (54%)
Query: 18 EFKVQLLLQLHWKDPRLEYRHYAPHITEMVGERNFIQNIWTPHIYLTNERDSLVLGLYRR 77
+++V + L+ W DPRL Y Y ++ + + + +IW P ++ NE+ + +
Sbjct: 90 DYRVNIFLRQKWNDPRLAYSEYPDDSLDL--DPSMLDSIWKPDLFFANEKGANFHEVTTD 147
Query: 78 DMLVSILPDGDMLFSTR 94
+ L+ I +G++L+S R
Sbjct: 148 NKLLRIFKNGNVLYSIR 164
>UNIPROTKB|E2R7P3 [details] [associations]
symbol:GLRA3 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0045211 "postsynaptic membrane" evidence=IEA]
[GO:0030054 "cell junction" evidence=IEA] [GO:0022824
"transmitter-gated ion channel activity" evidence=IEA] [GO:0016934
"extracellular-glycine-gated chloride channel activity"
evidence=IEA] [GO:0016594 "glycine binding" evidence=IEA]
[GO:0005887 "integral to plasma membrane" evidence=IEA]
InterPro:IPR006028 InterPro:IPR006029 InterPro:IPR006201
InterPro:IPR006202 InterPro:IPR008127 InterPro:IPR008130
InterPro:IPR018000 Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252
PRINTS:PR00253 PRINTS:PR01673 PRINTS:PR01676 PROSITE:PS00236
GO:GO:0005887 GO:GO:0030054 GO:GO:0045211 Gene3D:2.70.170.10
PANTHER:PTHR18945 SUPFAM:SSF90112 SUPFAM:SSF63712
TIGRFAMs:TIGR00860 GO:GO:0016934 KO:K05195
GeneTree:ENSGT00550000074453 GO:GO:0016594 GO:GO:0022824 CTD:8001
OMA:PKNSDEM EMBL:AAEX03014316 RefSeq:XP_543200.2
ProteinModelPortal:E2R7P3 Ensembl:ENSCAFT00000012633 GeneID:486074
KEGG:cfa:486074 NextBio:20859920 Uniprot:E2R7P3
Length = 464
Score = 246 (91.7 bits), Expect = 1.8e-29, Sum P(2) = 1.8e-29
Identities = 46/116 (39%), Positives = 72/116 (62%)
Query: 88 DMLFSTRS-RAYMYSSLTLTFILNRQYGFYLMDFYAPSILLVCISWVSFWMAPDAVPGRT 146
D+ + T+ ++ + + F L RQ G+YL+ Y PS+L+V +SWVSFW+ DA P R
Sbjct: 227 DLRYCTKHYNTGKFTCIEVRFHLERQMGYYLIQMYIPSLLIVILSWVSFWINMDAAPARV 286
Query: 147 ILGASTMLTFFQLGIETGSSLPNVSYIRSNDVWFFACTVFIFLSLAEFAFVNTIWR 202
LG +T+LT + +SLP VSY+++ D+W C +F+F +L E+A VN + R
Sbjct: 287 ALGITTVLTMTTQSSGSRASLPKVSYVKAIDIWMAVCLLFVFSALLEYAAVNFVSR 342
Score = 107 (42.7 bits), Expect = 1.8e-29, Sum P(2) = 1.8e-29
Identities = 20/77 (25%), Positives = 42/77 (54%)
Query: 18 EFKVQLLLQLHWKDPRLEYRHYAPHITEMVGERNFIQNIWTPHIYLTNERDSLVLGLYRR 77
+++V + L+ W DPRL Y Y ++ + + + +IW P ++ NE+ + +
Sbjct: 90 DYRVNIFLRQKWNDPRLAYSEYPDDSLDL--DPSMLDSIWKPDLFFANEKGANFHEVTTD 147
Query: 78 DMLVSILPDGDMLFSTR 94
+ L+ I +G++L+S R
Sbjct: 148 NKLLRIFKNGNVLYSIR 164
>UNIPROTKB|O75311 [details] [associations]
symbol:GLRA3 "Glycine receptor subunit alpha-3"
species:9606 "Homo sapiens" [GO:0005887 "integral to plasma
membrane" evidence=IEA] [GO:0016594 "glycine binding" evidence=IEA]
[GO:0016934 "extracellular-glycine-gated chloride channel activity"
evidence=IEA] [GO:0022824 "transmitter-gated ion channel activity"
evidence=IEA] [GO:0030054 "cell junction" evidence=IEA] [GO:0034707
"chloride channel complex" evidence=IEA] [GO:0045211 "postsynaptic
membrane" evidence=IEA] [GO:0016021 "integral to membrane"
evidence=NAS] [GO:0007268 "synaptic transmission" evidence=NAS]
[GO:0005230 "extracellular ligand-gated ion channel activity"
evidence=NAS] [GO:0005886 "plasma membrane" evidence=TAS]
[GO:0034220 "ion transmembrane transport" evidence=TAS] [GO:0055085
"transmembrane transport" evidence=TAS] Reactome:REACT_15518
InterPro:IPR006028 InterPro:IPR006029 InterPro:IPR006201
InterPro:IPR006202 InterPro:IPR008127 InterPro:IPR008130
InterPro:IPR018000 Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252
PRINTS:PR00253 PRINTS:PR01673 PRINTS:PR01676 PROSITE:PS00236
EMBL:AF017724 GO:GO:0016021 GO:GO:0005886 GO:GO:0005887
GO:GO:0007268 GO:GO:0030054 GO:GO:0045211 GO:GO:0005230
Gene3D:2.70.170.10 PANTHER:PTHR18945 SUPFAM:SSF90112
SUPFAM:SSF63712 TIGRFAMs:TIGR00860 GO:GO:0016934 EMBL:CH471056
DrugBank:DB00145 GO:GO:0034707 HOVERGEN:HBG051707 eggNOG:NOG265706
KO:K05195 HOGENOM:HOG000231336 OrthoDB:EOG4TF0KF GO:GO:0016594
GO:GO:0022824 TCDB:1.A.9.3.1 EMBL:AF017715 EMBL:AF017716
EMBL:AF017717 EMBL:AF017718 EMBL:AF017719 EMBL:AF017720
EMBL:AF017721 EMBL:AF017722 EMBL:AF017723 EMBL:U93917 EMBL:BC036086
IPI:IPI00025243 IPI:IPI00216193 RefSeq:NP_001036008.1
RefSeq:NP_006520.2 UniGene:Hs.413099 ProteinModelPortal:O75311
SMR:O75311 STRING:O75311 PhosphoSite:O75311 PRIDE:O75311 DNASU:8001
Ensembl:ENST00000274093 Ensembl:ENST00000340217 GeneID:8001
KEGG:hsa:8001 UCSC:uc003ity.1 UCSC:uc003itz.1 CTD:8001
GeneCards:GC04M175558 HGNC:HGNC:4328 HPA:HPA014805 MIM:600421
neXtProt:NX_O75311 PharmGKB:PA28729 InParanoid:O75311 OMA:PKNSDEM
PhylomeDB:O75311 BindingDB:O75311 ChEMBL:CHEMBL1075092
GenomeRNAi:8001 NextBio:30552 ArrayExpress:O75311 Bgee:O75311
CleanEx:HS_GLRA3 Genevestigator:O75311 GermOnline:ENSG00000145451
Uniprot:O75311
Length = 464
Score = 246 (91.7 bits), Expect = 1.8e-29, Sum P(2) = 1.8e-29
Identities = 46/116 (39%), Positives = 72/116 (62%)
Query: 88 DMLFSTRS-RAYMYSSLTLTFILNRQYGFYLMDFYAPSILLVCISWVSFWMAPDAVPGRT 146
D+ + T+ ++ + + F L RQ G+YL+ Y PS+L+V +SWVSFW+ DA P R
Sbjct: 227 DLRYCTKHYNTGKFTCIEVRFHLERQMGYYLIQMYIPSLLIVILSWVSFWINMDAAPARV 286
Query: 147 ILGASTMLTFFQLGIETGSSLPNVSYIRSNDVWFFACTVFIFLSLAEFAFVNTIWR 202
LG +T+LT + +SLP VSY+++ D+W C +F+F +L E+A VN + R
Sbjct: 287 ALGITTVLTMTTQSSGSRASLPKVSYVKAIDIWMAVCLLFVFSALLEYAAVNFVSR 342
Score = 107 (42.7 bits), Expect = 1.8e-29, Sum P(2) = 1.8e-29
Identities = 20/77 (25%), Positives = 42/77 (54%)
Query: 18 EFKVQLLLQLHWKDPRLEYRHYAPHITEMVGERNFIQNIWTPHIYLTNERDSLVLGLYRR 77
+++V + L+ W DPRL Y Y ++ + + + +IW P ++ NE+ + +
Sbjct: 90 DYRVNIFLRQKWNDPRLAYSEYPDDSLDL--DPSMLDSIWKPDLFFANEKGANFHEVTTD 147
Query: 78 DMLVSILPDGDMLFSTR 94
+ L+ I +G++L+S R
Sbjct: 148 NKLLRIFKNGNVLYSIR 164
>MGI|MGI:95749 [details] [associations]
symbol:Glra3 "glycine receptor, alpha 3 subunit" species:10090
"Mus musculus" [GO:0005216 "ion channel activity" evidence=IEA]
[GO:0005230 "extracellular ligand-gated ion channel activity"
evidence=IEA] [GO:0005254 "chloride channel activity" evidence=IEA]
[GO:0005886 "plasma membrane" evidence=IEA] [GO:0005887 "integral
to plasma membrane" evidence=IEA] [GO:0006810 "transport"
evidence=IEA] [GO:0006811 "ion transport" evidence=IEA] [GO:0006821
"chloride transport" evidence=IEA] [GO:0016020 "membrane"
evidence=IEA] [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0016594 "glycine binding" evidence=IEA] [GO:0016934
"extracellular-glycine-gated chloride channel activity"
evidence=ISO] [GO:0022824 "transmitter-gated ion channel activity"
evidence=IEA] [GO:0030054 "cell junction" evidence=IEA] [GO:0034707
"chloride channel complex" evidence=IEA] [GO:0045202 "synapse"
evidence=IEA] [GO:0045211 "postsynaptic membrane" evidence=IEA]
InterPro:IPR006028 InterPro:IPR006029 InterPro:IPR006201
InterPro:IPR006202 InterPro:IPR008127 InterPro:IPR008130
InterPro:IPR018000 Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252
PRINTS:PR00253 PRINTS:PR01673 PRINTS:PR01676 PROSITE:PS00236
MGI:MGI:95749 GO:GO:0005887 GO:GO:0030054 GO:GO:0045211
Gene3D:2.70.170.10 PANTHER:PTHR18945 SUPFAM:SSF90112
SUPFAM:SSF63712 TIGRFAMs:TIGR00860 GO:GO:0016934 GO:GO:0034707
HOVERGEN:HBG051707 eggNOG:NOG265706 KO:K05195 HOGENOM:HOG000231336
OrthoDB:EOG4TF0KF GO:GO:0016594 GO:GO:0022824 CTD:8001
EMBL:AF362764 EMBL:AY230204 IPI:IPI00380761 RefSeq:NP_536686.2
UniGene:Mm.307061 ProteinModelPortal:Q91XP5 SMR:Q91XP5
STRING:Q91XP5 PhosphoSite:Q91XP5 PaxDb:Q91XP5 PRIDE:Q91XP5
DNASU:110304 GeneID:110304 KEGG:mmu:110304 UCSC:uc009ujb.2
InParanoid:Q91XP5 NextBio:363729 Bgee:Q91XP5 CleanEx:MM_GLRA3
Genevestigator:Q91XP5 GermOnline:ENSMUSG00000038257 Uniprot:Q91XP5
Length = 464
Score = 246 (91.7 bits), Expect = 1.8e-29, Sum P(2) = 1.8e-29
Identities = 46/116 (39%), Positives = 72/116 (62%)
Query: 88 DMLFSTRS-RAYMYSSLTLTFILNRQYGFYLMDFYAPSILLVCISWVSFWMAPDAVPGRT 146
D+ + T+ ++ + + F L RQ G+YL+ Y PS+L+V +SWVSFW+ DA P R
Sbjct: 227 DLRYCTKHYNTGKFTCIEVRFHLERQMGYYLIQMYIPSLLIVILSWVSFWINMDAAPARV 286
Query: 147 ILGASTMLTFFQLGIETGSSLPNVSYIRSNDVWFFACTVFIFLSLAEFAFVNTIWR 202
LG +T+LT + +SLP VSY+++ D+W C +F+F +L E+A VN + R
Sbjct: 287 ALGITTVLTMTTQSSGSRASLPKVSYVKAIDIWMAVCLLFVFSALLEYAAVNFVSR 342
Score = 107 (42.7 bits), Expect = 1.8e-29, Sum P(2) = 1.8e-29
Identities = 20/77 (25%), Positives = 42/77 (54%)
Query: 18 EFKVQLLLQLHWKDPRLEYRHYAPHITEMVGERNFIQNIWTPHIYLTNERDSLVLGLYRR 77
+++V + L+ W DPRL Y Y ++ + + + +IW P ++ NE+ + +
Sbjct: 90 DYRVNIFLRQKWNDPRLAYSEYPDDSLDL--DPSMLDSIWKPDLFFANEKGANFHEVTTD 147
Query: 78 DMLVSILPDGDMLFSTR 94
+ L+ I +G++L+S R
Sbjct: 148 NKLLRIFKNGNVLYSIR 164
>RGD|621229 [details] [associations]
symbol:Glra3 "glycine receptor, alpha 3" species:10116 "Rattus
norvegicus" [GO:0005887 "integral to plasma membrane" evidence=IEA]
[GO:0016594 "glycine binding" evidence=IEA] [GO:0016934
"extracellular-glycine-gated chloride channel activity"
evidence=IDA] [GO:0022824 "transmitter-gated ion channel activity"
evidence=IEA] [GO:0030054 "cell junction" evidence=IEA] [GO:0034707
"chloride channel complex" evidence=IEA] [GO:0045211 "postsynaptic
membrane" evidence=IEA] InterPro:IPR006028 InterPro:IPR006029
InterPro:IPR006201 InterPro:IPR006202 InterPro:IPR008127
InterPro:IPR008130 InterPro:IPR018000 Pfam:PF02931 Pfam:PF02932
PRINTS:PR00252 PRINTS:PR00253 PRINTS:PR01673 PRINTS:PR01676
PROSITE:PS00236 RGD:621229 GO:GO:0005887 GO:GO:0030054
GO:GO:0045211 Gene3D:2.70.170.10 PANTHER:PTHR18945 SUPFAM:SSF90112
SUPFAM:SSF63712 TIGRFAMs:TIGR00860 GO:GO:0016934 GO:GO:0034707
HOVERGEN:HBG051707 eggNOG:NOG265706 GO:GO:0016594 GO:GO:0022824
EMBL:M55250 IPI:IPI00392219 PIR:A23682 UniGene:Rn.10038
ProteinModelPortal:P24524 SMR:P24524 BindingDB:P24524
ChEMBL:CHEMBL2677 Genevestigator:P24524 Uniprot:P24524
Length = 464
Score = 246 (91.7 bits), Expect = 1.8e-29, Sum P(2) = 1.8e-29
Identities = 46/116 (39%), Positives = 72/116 (62%)
Query: 88 DMLFSTRS-RAYMYSSLTLTFILNRQYGFYLMDFYAPSILLVCISWVSFWMAPDAVPGRT 146
D+ + T+ ++ + + F L RQ G+YL+ Y PS+L+V +SWVSFW+ DA P R
Sbjct: 227 DLRYCTKHYNTGKFTCIEVRFHLERQMGYYLIQMYIPSLLIVILSWVSFWINMDAAPARV 286
Query: 147 ILGASTMLTFFQLGIETGSSLPNVSYIRSNDVWFFACTVFIFLSLAEFAFVNTIWR 202
LG +T+LT + +SLP VSY+++ D+W C +F+F +L E+A VN + R
Sbjct: 287 ALGITTVLTMTTQSSGSRASLPKVSYVKAIDIWMAVCLLFVFSALLEYAAVNFVSR 342
Score = 107 (42.7 bits), Expect = 1.8e-29, Sum P(2) = 1.8e-29
Identities = 20/77 (25%), Positives = 42/77 (54%)
Query: 18 EFKVQLLLQLHWKDPRLEYRHYAPHITEMVGERNFIQNIWTPHIYLTNERDSLVLGLYRR 77
+++V + L+ W DPRL Y Y ++ + + + +IW P ++ NE+ + +
Sbjct: 90 DYRVNIFLRQKWNDPRLAYSEYPDDSLDL--DPSMLDSIWKPDLFFANEKGANFHEVTTD 147
Query: 78 DMLVSILPDGDMLFSTR 94
+ L+ I +G++L+S R
Sbjct: 148 NKLLRIFKNGNVLYSIR 164
>UNIPROTKB|E2QZJ3 [details] [associations]
symbol:GLRA2 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0045211 "postsynaptic membrane" evidence=IEA]
[GO:0030054 "cell junction" evidence=IEA] [GO:0022824
"transmitter-gated ion channel activity" evidence=IEA] [GO:0016934
"extracellular-glycine-gated chloride channel activity"
evidence=IEA] [GO:0016594 "glycine binding" evidence=IEA]
[GO:0005887 "integral to plasma membrane" evidence=IEA]
InterPro:IPR006028 InterPro:IPR006029 InterPro:IPR006201
InterPro:IPR006202 InterPro:IPR008127 InterPro:IPR008129
InterPro:IPR018000 Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252
PRINTS:PR00253 PRINTS:PR01673 PRINTS:PR01675 PROSITE:PS00236
GO:GO:0005887 GO:GO:0030054 GO:GO:0045211 Gene3D:2.70.170.10
PANTHER:PTHR18945 SUPFAM:SSF90112 SUPFAM:SSF63712
TIGRFAMs:TIGR00860 GO:GO:0016934 GO:GO:0016594 GO:GO:0022824
Ensembl:ENSCAFT00000018822 Uniprot:E2QZJ3
Length = 374
Score = 246 (91.7 bits), Expect = 2.0e-29, Sum P(2) = 2.0e-29
Identities = 44/103 (42%), Positives = 67/103 (65%)
Query: 100 YSSLTLTFILNRQYGFYLMDFYAPSILLVCISWVSFWMAPDAVPGRTILGASTMLTFFQL 159
++ + + F L RQ G+YL+ Y PS+L+V +SWVSFW+ DA P R LG +T+LT
Sbjct: 241 FTCIEVKFHLERQMGYYLIQMYIPSLLIVILSWVSFWINMDAAPARVALGITTVLTMTTQ 300
Query: 160 GIETGSSLPNVSYIRSNDVWFFACTVFIFLSLAEFAFVNTIWR 202
+ +SLP VSY+++ D+W C +F+F +L E+A VN + R
Sbjct: 301 SSGSRASLPKVSYVKAIDIWMAVCLLFVFAALLEYAAVNFVSR 343
Score = 97 (39.2 bits), Expect = 2.0e-29, Sum P(2) = 2.0e-29
Identities = 19/77 (24%), Positives = 40/77 (51%)
Query: 18 EFKVQLLLQLHWKDPRLEYRHYAPHITEMVGERNFIQNIWTPHIYLTNERDSLVLGLYRR 77
+++V + L+ W D RL Y Y ++ + + + +IW P ++ NE+ + +
Sbjct: 91 DYRVNIFLRQQWNDSRLAYSEYPDDSLDL--DPSMLDSIWKPDLFFANEKGANFHDVTTD 148
Query: 78 DMLVSILPDGDMLFSTR 94
+ L+ I +G +L+S R
Sbjct: 149 NKLLRISKNGKVLYSIR 165
>UNIPROTKB|E2RCM7 [details] [associations]
symbol:GLRA4 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0045211 "postsynaptic membrane" evidence=IEA]
[GO:0030054 "cell junction" evidence=IEA] [GO:0022824
"transmitter-gated ion channel activity" evidence=IEA] [GO:0016594
"glycine binding" evidence=IEA] [GO:0005887 "integral to plasma
membrane" evidence=IEA] [GO:0005230 "extracellular ligand-gated ion
channel activity" evidence=IEA] InterPro:IPR006028
InterPro:IPR006029 InterPro:IPR006201 InterPro:IPR006202
InterPro:IPR008127 InterPro:IPR018000 Pfam:PF02931 Pfam:PF02932
PRINTS:PR00252 PRINTS:PR00253 PRINTS:PR01673 PROSITE:PS00236
GO:GO:0005887 GO:GO:0030054 GO:GO:0045211 GO:GO:0005230
Gene3D:2.70.170.10 PANTHER:PTHR18945 SUPFAM:SSF90112
SUPFAM:SSF63712 TIGRFAMs:TIGR00860 GeneTree:ENSGT00550000074453
GO:GO:0016594 GO:GO:0022824 CTD:441509 KO:K05271 OMA:IQESRFY
EMBL:AAEX03026730 RefSeq:XP_549155.2 ProteinModelPortal:E2RCM7
Ensembl:ENSCAFT00000028247 GeneID:492035 KEGG:cfa:492035
NextBio:20864703 Uniprot:E2RCM7
Length = 457
Score = 242 (90.2 bits), Expect = 2.9e-29, Sum P(2) = 2.9e-29
Identities = 43/101 (42%), Positives = 66/101 (65%)
Query: 100 YSSLTLTFILNRQYGFYLMDFYAPSILLVCISWVSFWMAPDAVPGRTILGASTMLTFFQL 159
++ + + F L RQ G+YL+ Y PS+L+V +SWVSFW+ DA P R LG +T+LT
Sbjct: 242 FTCIEVKFHLERQMGYYLIQMYIPSLLIVILSWVSFWINMDAAPARVSLGITTVLTMTTQ 301
Query: 160 GIETGSSLPNVSYIRSNDVWFFACTVFIFLSLAEFAFVNTI 200
+ +SLP VSY+++ D+W C +F+F +L E+A VN +
Sbjct: 302 SSGSRASLPKVSYVKAIDIWMAVCLLFVFSALLEYAAVNFV 342
Score = 109 (43.4 bits), Expect = 2.9e-29, Sum P(2) = 2.9e-29
Identities = 20/77 (25%), Positives = 43/77 (55%)
Query: 18 EFKVQLLLQLHWKDPRLEYRHYAPHITEMVGERNFIQNIWTPHIYLTNERDSLVLGLYRR 77
+++V + L+ W DPRL Y+ Y ++ + + + +IW P ++ NE+ + +
Sbjct: 91 DYRVNVFLRQQWNDPRLAYQEYPDDSLDL--DPSMLDSIWKPDLFFANEKGANFHEVTTD 148
Query: 78 DMLVSILPDGDMLFSTR 94
+ L+ I +G++L+S R
Sbjct: 149 NKLLRIFKNGNVLYSIR 165
>UNIPROTKB|F1SQV0 [details] [associations]
symbol:GLRA2 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0045211 "postsynaptic membrane" evidence=IEA]
[GO:0030054 "cell junction" evidence=IEA] [GO:0022824
"transmitter-gated ion channel activity" evidence=IEA] [GO:0016934
"extracellular-glycine-gated chloride channel activity"
evidence=IEA] [GO:0016594 "glycine binding" evidence=IEA]
[GO:0005887 "integral to plasma membrane" evidence=IEA]
InterPro:IPR006028 InterPro:IPR006029 InterPro:IPR006201
InterPro:IPR006202 InterPro:IPR008127 InterPro:IPR008129
InterPro:IPR018000 Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252
PRINTS:PR00253 PRINTS:PR01673 PRINTS:PR01675 PROSITE:PS00236
GO:GO:0005887 GO:GO:0030054 GO:GO:0045211 Gene3D:2.70.170.10
PANTHER:PTHR18945 SUPFAM:SSF90112 SUPFAM:SSF63712
TIGRFAMs:TIGR00860 GO:GO:0016934 GO:GO:0016594 GO:GO:0022824
OMA:TTLFAFF EMBL:CU207369 EMBL:CU914724 Ensembl:ENSSSCT00000013268
Uniprot:F1SQV0
Length = 385
Score = 246 (91.7 bits), Expect = 3.2e-29, Sum P(2) = 3.2e-29
Identities = 44/103 (42%), Positives = 67/103 (65%)
Query: 100 YSSLTLTFILNRQYGFYLMDFYAPSILLVCISWVSFWMAPDAVPGRTILGASTMLTFFQL 159
++ + + F L RQ G+YL+ Y PS+L+V +SWVSFW+ DA P R LG +T+LT
Sbjct: 174 FTCIEVKFHLERQMGYYLIQMYIPSLLIVILSWVSFWINMDAAPARVALGITTVLTMTTQ 233
Query: 160 GIETGSSLPNVSYIRSNDVWFFACTVFIFLSLAEFAFVNTIWR 202
+ +SLP VSY+++ D+W C +F+F +L E+A VN + R
Sbjct: 234 SSGSRASLPKVSYVKAIDIWMAVCLLFVFAALLEYAAVNFVSR 276
Score = 97 (39.2 bits), Expect = 3.2e-29, Sum P(2) = 3.2e-29
Identities = 19/77 (24%), Positives = 40/77 (51%)
Query: 18 EFKVQLLLQLHWKDPRLEYRHYAPHITEMVGERNFIQNIWTPHIYLTNERDSLVLGLYRR 77
+++V + L+ W D RL Y Y ++ + + + +IW P ++ NE+ + +
Sbjct: 24 DYRVNIFLRQQWNDSRLAYSEYPDDSLDL--DPSMLDSIWKPDLFFANEKGANFHDVTTD 81
Query: 78 DMLVSILPDGDMLFSTR 94
+ L+ I +G +L+S R
Sbjct: 82 NKLLRISKNGKVLYSIR 98
>UNIPROTKB|K7GSI6 [details] [associations]
symbol:GLRA2 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0045211 "postsynaptic membrane" evidence=IEA]
[GO:0030054 "cell junction" evidence=IEA] [GO:0022824
"transmitter-gated ion channel activity" evidence=IEA] [GO:0016934
"extracellular-glycine-gated chloride channel activity"
evidence=IEA] [GO:0016594 "glycine binding" evidence=IEA]
[GO:0005887 "integral to plasma membrane" evidence=IEA]
InterPro:IPR006028 InterPro:IPR006029 InterPro:IPR006201
InterPro:IPR006202 InterPro:IPR008127 InterPro:IPR008129
InterPro:IPR018000 Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252
PRINTS:PR00253 PRINTS:PR01673 PRINTS:PR01675 PROSITE:PS00236
Gene3D:2.70.170.10 PANTHER:PTHR18945 SUPFAM:SSF90112
SUPFAM:SSF63712 TIGRFAMs:TIGR00860 GeneTree:ENSGT00550000074453
EMBL:CU207369 EMBL:CU914724 Ensembl:ENSSSCT00000033189
Uniprot:K7GSI6
Length = 385
Score = 246 (91.7 bits), Expect = 3.2e-29, Sum P(2) = 3.2e-29
Identities = 44/103 (42%), Positives = 67/103 (65%)
Query: 100 YSSLTLTFILNRQYGFYLMDFYAPSILLVCISWVSFWMAPDAVPGRTILGASTMLTFFQL 159
++ + + F L RQ G+YL+ Y PS+L+V +SWVSFW+ DA P R LG +T+LT
Sbjct: 174 FTCIEVKFHLERQMGYYLIQMYIPSLLIVILSWVSFWINMDAAPARVALGITTVLTMTTQ 233
Query: 160 GIETGSSLPNVSYIRSNDVWFFACTVFIFLSLAEFAFVNTIWR 202
+ +SLP VSY+++ D+W C +F+F +L E+A VN + R
Sbjct: 234 SSGSRASLPKVSYVKAIDIWMAVCLLFVFAALLEYAAVNFVSR 276
Score = 97 (39.2 bits), Expect = 3.2e-29, Sum P(2) = 3.2e-29
Identities = 19/77 (24%), Positives = 40/77 (51%)
Query: 18 EFKVQLLLQLHWKDPRLEYRHYAPHITEMVGERNFIQNIWTPHIYLTNERDSLVLGLYRR 77
+++V + L+ W D RL Y Y ++ + + + +IW P ++ NE+ + +
Sbjct: 24 DYRVNIFLRQQWNDSRLAYSEYPDDSLDL--DPSMLDSIWKPDLFFANEKGANFHDVTTD 81
Query: 78 DMLVSILPDGDMLFSTR 94
+ L+ I +G +L+S R
Sbjct: 82 NKLLRISKNGKVLYSIR 98
>ZFIN|ZDB-GENE-991117-1 [details] [associations]
symbol:glra1 "glycine receptor, alpha 1" species:7955
"Danio rerio" [GO:0022824 "transmitter-gated ion channel activity"
evidence=IEA] [GO:0005230 "extracellular ligand-gated ion channel
activity" evidence=IEA] [GO:0006810 "transport" evidence=IEA]
[GO:0006811 "ion transport" evidence=IEA;IDA] [GO:0016020
"membrane" evidence=IEA] [GO:0016021 "integral to membrane"
evidence=IEA] [GO:0016594 "glycine binding" evidence=IEA]
[GO:0045211 "postsynaptic membrane" evidence=IEA] [GO:0016934
"extracellular-glycine-gated chloride channel activity"
evidence=IEA;IDA] [GO:0005887 "integral to plasma membrane"
evidence=IEA] [GO:0006821 "chloride transport" evidence=IEA]
[GO:0045664 "regulation of neuron differentiation" evidence=IMP]
[GO:0007417 "central nervous system development" evidence=IMP]
[GO:0043200 "response to amino acid stimulus" evidence=IDA]
[GO:0045202 "synapse" evidence=IEA] [GO:0005886 "plasma membrane"
evidence=IEA] [GO:0030054 "cell junction" evidence=IEA] [GO:0034707
"chloride channel complex" evidence=IEA] [GO:0005254 "chloride
channel activity" evidence=IEA] InterPro:IPR006028
InterPro:IPR006029 InterPro:IPR006201 InterPro:IPR006202
InterPro:IPR008127 InterPro:IPR008128 InterPro:IPR018000
Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252 PRINTS:PR00253
PRINTS:PR01673 PRINTS:PR01674 PROSITE:PS00236
ZFIN:ZDB-GENE-991117-1 GO:GO:0045664 GO:GO:0005887 GO:GO:0030054
GO:GO:0045211 Gene3D:2.70.170.10 PANTHER:PTHR18945 SUPFAM:SSF90112
SUPFAM:SSF63712 TIGRFAMs:TIGR00860 GO:GO:0007417 GO:GO:0016934
GO:GO:0043200 HOVERGEN:HBG051707 HSSP:P23415 HOGENOM:HOG000231336
OrthoDB:EOG4TF0KF GO:GO:0016594 GO:GO:0022824 EMBL:AF488379
IPI:IPI00486644 UniGene:Dr.75842 ProteinModelPortal:Q8QG93
SMR:Q8QG93 PRIDE:Q8QG93 InParanoid:Q8QG93 ArrayExpress:Q8QG93
Bgee:Q8QG93 Uniprot:Q8QG93
Length = 459
Score = 242 (90.2 bits), Expect = 6.2e-29, Sum P(2) = 6.2e-29
Identities = 47/116 (40%), Positives = 71/116 (61%)
Query: 88 DMLFSTRS-RAYMYSSLTLTFILNRQYGFYLMDFYAPSILLVCISWVSFWMAPDAVPGRT 146
D+ + T+ ++ + F L RQ G+YL+ Y PS+L+V +SWVSFW+ DA P R
Sbjct: 233 DLRYCTKHYNTGKFTCIEARFHLERQMGYYLIQMYIPSLLIVILSWVSFWINMDAAPARV 292
Query: 147 ILGASTMLTFFQLGIETGSSLPNVSYIRSNDVWFFACTVFIFLSLAEFAFVNTIWR 202
LG +T+LT + +SLP VSY+++ D+W C +F+F +L E+A VN I R
Sbjct: 293 GLGITTVLTMTTQSSGSRASLPKVSYVKAIDIWMAVCLLFVFSALLEYAAVNFIAR 348
Score = 106 (42.4 bits), Expect = 6.2e-29, Sum P(2) = 6.2e-29
Identities = 20/77 (25%), Positives = 42/77 (54%)
Query: 18 EFKVQLLLQLHWKDPRLEYRHYAPHITEMVGERNFIQNIWTPHIYLTNERDSLVLGLYRR 77
+++V + L+ W DPRL Y Y ++ + + + +IW P ++ NE+ + +
Sbjct: 96 DYRVNIFLRQQWNDPRLAYSEYPDDSLDL--DPSMLDSIWKPDLFFANEKGANFHEVTTD 153
Query: 78 DMLVSILPDGDMLFSTR 94
+ L+ I +G++L+S R
Sbjct: 154 NKLLRISKNGNVLYSIR 170
>UNIPROTKB|F1RQB7 [details] [associations]
symbol:GLRA1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:2000344 "positive regulation of acrosome reaction"
evidence=IEA] [GO:0060080 "regulation of inhibitory postsynaptic
membrane potential" evidence=IEA] [GO:0060013 "righting reflex"
evidence=IEA] [GO:0060012 "synaptic transmission, glycinergic"
evidence=IEA] [GO:0051970 "negative regulation of transmission of
nerve impulse" evidence=IEA] [GO:0050884 "neuromuscular process
controlling posture" evidence=IEA] [GO:0045211 "postsynaptic
membrane" evidence=IEA] [GO:0043231 "intracellular membrane-bounded
organelle" evidence=IEA] [GO:0030977 "taurine binding"
evidence=IEA] [GO:0016934 "extracellular-glycine-gated chloride
channel activity" evidence=IEA] [GO:0016594 "glycine binding"
evidence=IEA] [GO:0009897 "external side of plasma membrane"
evidence=IEA] [GO:0007628 "adult walking behavior" evidence=IEA]
[GO:0007601 "visual perception" evidence=IEA] [GO:0007340 "acrosome
reaction" evidence=IEA] [GO:0007218 "neuropeptide signaling
pathway" evidence=IEA] [GO:0006936 "muscle contraction"
evidence=IEA] [GO:0005887 "integral to plasma membrane"
evidence=IEA] [GO:0002087 "regulation of respiratory gaseous
exchange by neurological system process" evidence=IEA] [GO:0001964
"startle response" evidence=IEA] [GO:0001508 "regulation of action
potential" evidence=IEA] [GO:0030054 "cell junction" evidence=IEA]
[GO:0022824 "transmitter-gated ion channel activity" evidence=IEA]
InterPro:IPR006028 InterPro:IPR006029 InterPro:IPR006201
InterPro:IPR006202 InterPro:IPR008127 InterPro:IPR008128
InterPro:IPR018000 Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252
PRINTS:PR00253 PRINTS:PR01673 PRINTS:PR01674 PROSITE:PS00236
GO:GO:0043231 GO:GO:0005887 GO:GO:0009897 GO:GO:0030054
GO:GO:0045211 Gene3D:2.70.170.10 PANTHER:PTHR18945 SUPFAM:SSF90112
SUPFAM:SSF63712 TIGRFAMs:TIGR00860 GO:GO:0007218 GO:GO:0007601
GO:GO:0002087 GO:GO:0060080 GO:GO:0001508 GO:GO:0006936
GO:GO:0016934 GO:GO:0007340 GO:GO:0060013 GO:GO:0007628
GO:GO:2000344 GO:GO:0001964 GO:GO:0050884
GeneTree:ENSGT00550000074453 OMA:NTANPVP GO:GO:0016594
GO:GO:0030977 GO:GO:0022824 GO:GO:0051970 GO:GO:0060012
EMBL:CU570659 EMBL:CU463090 Ensembl:ENSSSCT00000018594
Uniprot:F1RQB7
Length = 443
Score = 240 (89.5 bits), Expect = 6.4e-29, Sum P(2) = 6.4e-29
Identities = 45/116 (38%), Positives = 71/116 (61%)
Query: 88 DMLFSTRS-RAYMYSSLTLTFILNRQYGFYLMDFYAPSILLVCISWVSFWMAPDAVPGRT 146
D+ + T+ ++ + F L RQ G+YL+ Y PS+L+V +SW+SFW+ DA P R
Sbjct: 209 DLRYCTKHYNTGKFTCIEARFHLERQMGYYLIQMYIPSLLIVILSWISFWINMDAAPARV 268
Query: 147 ILGASTMLTFFQLGIETGSSLPNVSYIRSNDVWFFACTVFIFLSLAEFAFVNTIWR 202
LG +T+LT + +SLP VSY+++ D+W C +F+F +L E+A VN + R
Sbjct: 269 GLGITTVLTMTTQSSGSRASLPKVSYVKAIDIWMAVCLLFVFSALLEYAAVNFVSR 324
Score = 107 (42.7 bits), Expect = 6.4e-29, Sum P(2) = 6.4e-29
Identities = 20/77 (25%), Positives = 42/77 (54%)
Query: 18 EFKVQLLLQLHWKDPRLEYRHYAPHITEMVGERNFIQNIWTPHIYLTNERDSLVLGLYRR 77
+++V + L+ W DPRL Y Y ++ + + + +IW P ++ NE+ + +
Sbjct: 72 DYRVNIFLRQQWNDPRLAYNEYPDDSLDL--DPSMLDSIWKPDLFFANEKGAHFHEITTD 129
Query: 78 DMLVSILPDGDMLFSTR 94
+ L+ I +G++L+S R
Sbjct: 130 NKLLRISRNGNVLYSIR 146
>UNIPROTKB|F1NH12 [details] [associations]
symbol:GLRA1 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0022824 "transmitter-gated ion channel activity"
evidence=IEA] [GO:0030054 "cell junction" evidence=IEA] [GO:0001508
"regulation of action potential" evidence=IEA] [GO:0001964 "startle
response" evidence=IEA] [GO:0002087 "regulation of respiratory
gaseous exchange by neurological system process" evidence=IEA]
[GO:0005887 "integral to plasma membrane" evidence=IEA] [GO:0006936
"muscle contraction" evidence=IEA] [GO:0007218 "neuropeptide
signaling pathway" evidence=IEA] [GO:0007340 "acrosome reaction"
evidence=IEA] [GO:0007601 "visual perception" evidence=IEA]
[GO:0007628 "adult walking behavior" evidence=IEA] [GO:0009897
"external side of plasma membrane" evidence=IEA] [GO:0016594
"glycine binding" evidence=IEA] [GO:0016934
"extracellular-glycine-gated chloride channel activity"
evidence=IEA] [GO:0030977 "taurine binding" evidence=IEA]
[GO:0043231 "intracellular membrane-bounded organelle"
evidence=IEA] [GO:0045211 "postsynaptic membrane" evidence=IEA]
[GO:0050884 "neuromuscular process controlling posture"
evidence=IEA] [GO:0051970 "negative regulation of transmission of
nerve impulse" evidence=IEA] [GO:0060012 "synaptic transmission,
glycinergic" evidence=IEA] [GO:0060013 "righting reflex"
evidence=IEA] [GO:0060080 "regulation of inhibitory postsynaptic
membrane potential" evidence=IEA] [GO:2000344 "positive regulation
of acrosome reaction" evidence=IEA] InterPro:IPR006028
InterPro:IPR006029 InterPro:IPR006201 InterPro:IPR006202
InterPro:IPR008127 InterPro:IPR008128 InterPro:IPR018000
Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252 PRINTS:PR00253
PRINTS:PR01673 PRINTS:PR01674 PROSITE:PS00236 GO:GO:0043231
GO:GO:0005887 GO:GO:0009897 GO:GO:0030054 GO:GO:0045211
Gene3D:2.70.170.10 PANTHER:PTHR18945 SUPFAM:SSF90112
SUPFAM:SSF63712 TIGRFAMs:TIGR00860 GO:GO:0007218 GO:GO:0001508
GO:GO:0016934 GO:GO:0007340 GO:GO:0060013 GO:GO:0043576
GO:GO:2000344 GeneTree:ENSGT00550000074453 OMA:NTANPVP
GO:GO:0016594 GO:GO:0030977 GO:GO:0022824 GO:GO:0051970
EMBL:AADN02028653 IPI:IPI00580687 Ensembl:ENSGALT00000034504
Uniprot:F1NH12
Length = 452
Score = 240 (89.5 bits), Expect = 7.4e-29, Sum P(2) = 7.4e-29
Identities = 45/116 (38%), Positives = 71/116 (61%)
Query: 88 DMLFSTRS-RAYMYSSLTLTFILNRQYGFYLMDFYAPSILLVCISWVSFWMAPDAVPGRT 146
D+ + T+ ++ + F L RQ G+YL+ Y PS+L+V +SW+SFW+ DA P R
Sbjct: 225 DLRYCTKHYNTGKFTCIEARFHLERQMGYYLIQMYIPSLLIVILSWISFWINMDAAPARV 284
Query: 147 ILGASTMLTFFQLGIETGSSLPNVSYIRSNDVWFFACTVFIFLSLAEFAFVNTIWR 202
LG +T+LT + +SLP VSY+++ D+W C +F+F +L E+A VN + R
Sbjct: 285 GLGITTVLTMTTQSSGSRASLPKVSYVKAIDIWMAVCLLFVFSALLEYAAVNFVSR 340
Score = 107 (42.7 bits), Expect = 7.4e-29, Sum P(2) = 7.4e-29
Identities = 20/77 (25%), Positives = 42/77 (54%)
Query: 18 EFKVQLLLQLHWKDPRLEYRHYAPHITEMVGERNFIQNIWTPHIYLTNERDSLVLGLYRR 77
+++V + L+ W DPRL Y Y ++ + + + +IW P ++ NE+ + +
Sbjct: 88 DYRVNIFLRQQWNDPRLAYNEYPDDSLDL--DPSMLDSIWKPDLFFANEKGAHFHEITTD 145
Query: 78 DMLVSILPDGDMLFSTR 94
+ L+ I +G++L+S R
Sbjct: 146 NKLLRISRNGNVLYSIR 162
>UNIPROTKB|E9PT06 [details] [associations]
symbol:Glra1 "Glycine receptor subunit alpha-1"
species:10116 "Rattus norvegicus" [GO:0005887 "integral to plasma
membrane" evidence=IEA] [GO:0016594 "glycine binding" evidence=IEA]
[GO:0016934 "extracellular-glycine-gated chloride channel activity"
evidence=IEA] [GO:0022824 "transmitter-gated ion channel activity"
evidence=IEA] [GO:0030054 "cell junction" evidence=IEA] [GO:0045211
"postsynaptic membrane" evidence=IEA] InterPro:IPR006028
InterPro:IPR006029 InterPro:IPR006201 InterPro:IPR006202
InterPro:IPR008127 InterPro:IPR008128 InterPro:IPR018000
Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252 PRINTS:PR00253
PRINTS:PR01673 PRINTS:PR01674 PROSITE:PS00236 RGD:2704
GO:GO:0043231 GO:GO:0005887 GO:GO:0009897 GO:GO:0030054
GO:GO:0045211 Gene3D:2.70.170.10 PANTHER:PTHR18945 SUPFAM:SSF90112
SUPFAM:SSF63712 TIGRFAMs:TIGR00860 GO:GO:0007218 GO:GO:0007601
GO:GO:0002087 GO:GO:0060080 GO:GO:0001508 GO:GO:0006936
GO:GO:0016934 GO:GO:0007340 GO:GO:0060013 GO:GO:0007628
GO:GO:2000344 GO:GO:0001964 GO:GO:0050884 GO:GO:0016594
GO:GO:0030977 GO:GO:0022824 GO:GO:0051970 GO:GO:0060012
IPI:IPI01007606 Ensembl:ENSRNOT00000066564 ArrayExpress:E9PT06
Uniprot:E9PT06
Length = 456
Score = 240 (89.5 bits), Expect = 7.9e-29, Sum P(2) = 7.9e-29
Identities = 45/116 (38%), Positives = 71/116 (61%)
Query: 88 DMLFSTRS-RAYMYSSLTLTFILNRQYGFYLMDFYAPSILLVCISWVSFWMAPDAVPGRT 146
D+ + T+ ++ + F L RQ G+YL+ Y PS+L+V +SW+SFW+ DA P R
Sbjct: 222 DLRYCTKHYNTGKFTCIEARFHLERQMGYYLIQMYIPSLLIVILSWISFWINMDAAPARV 281
Query: 147 ILGASTMLTFFQLGIETGSSLPNVSYIRSNDVWFFACTVFIFLSLAEFAFVNTIWR 202
LG +T+LT + +SLP VSY+++ D+W C +F+F +L E+A VN + R
Sbjct: 282 GLGITTVLTMTTQSSGSRASLPKVSYVKAIDIWMAVCLLFVFSALLEYAAVNFVSR 337
Score = 107 (42.7 bits), Expect = 7.9e-29, Sum P(2) = 7.9e-29
Identities = 20/77 (25%), Positives = 42/77 (54%)
Query: 18 EFKVQLLLQLHWKDPRLEYRHYAPHITEMVGERNFIQNIWTPHIYLTNERDSLVLGLYRR 77
+++V + L+ W DPRL Y Y ++ + + + +IW P ++ NE+ + +
Sbjct: 85 DYRVNIFLRQQWNDPRLAYNEYPDDSLDL--DPSMLDSIWKPDLFFANEKGAHFHEITTD 142
Query: 78 DMLVSILPDGDMLFSTR 94
+ L+ I +G++L+S R
Sbjct: 143 NKLLRISRNGNVLYSIR 159
>UNIPROTKB|P57695 [details] [associations]
symbol:GLRA1 "Glycine receptor subunit alpha-1"
species:9913 "Bos taurus" [GO:0016594 "glycine binding"
evidence=ISS] [GO:0006936 "muscle contraction" evidence=ISS]
[GO:0006821 "chloride transport" evidence=ISS] [GO:0001964 "startle
response" evidence=ISS] [GO:0051970 "negative regulation of
transmission of nerve impulse" evidence=ISS] [GO:0043231
"intracellular membrane-bounded organelle" evidence=ISS]
[GO:0030977 "taurine binding" evidence=ISS] [GO:0016934
"extracellular-glycine-gated chloride channel activity"
evidence=ISS] [GO:0007218 "neuropeptide signaling pathway"
evidence=ISS] [GO:0006811 "ion transport" evidence=ISS] [GO:0005887
"integral to plasma membrane" evidence=ISS] [GO:0045211
"postsynaptic membrane" evidence=IEA] [GO:2000344 "positive
regulation of acrosome reaction" evidence=IEA] [GO:0060080
"regulation of inhibitory postsynaptic membrane potential"
evidence=IEA] [GO:0060013 "righting reflex" evidence=IEA]
[GO:0060012 "synaptic transmission, glycinergic" evidence=IEA]
[GO:0050884 "neuromuscular process controlling posture"
evidence=IEA] [GO:0009897 "external side of plasma membrane"
evidence=IEA] [GO:0007628 "adult walking behavior" evidence=IEA]
[GO:0007601 "visual perception" evidence=IEA] [GO:0007340 "acrosome
reaction" evidence=IEA] [GO:0002087 "regulation of respiratory
gaseous exchange by neurological system process" evidence=IEA]
[GO:0001508 "regulation of action potential" evidence=IEA]
[GO:0034707 "chloride channel complex" evidence=IEA] [GO:0030054
"cell junction" evidence=IEA] [GO:0022824 "transmitter-gated ion
channel activity" evidence=IEA] InterPro:IPR006028
InterPro:IPR006029 InterPro:IPR006201 InterPro:IPR006202
InterPro:IPR008127 InterPro:IPR008128 InterPro:IPR018000
Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252 PRINTS:PR00253
PRINTS:PR01673 PRINTS:PR01674 PROSITE:PS00236 GO:GO:0043231
GO:GO:0005887 GO:GO:0009897 GO:GO:0030054 GO:GO:0045211
Gene3D:2.70.170.10 PANTHER:PTHR18945 SUPFAM:SSF90112
SUPFAM:SSF63712 TIGRFAMs:TIGR00860 GO:GO:0007218 GO:GO:0007601
GO:GO:0002087 GO:GO:0060080 GO:GO:0001508 GO:GO:0006936
GO:GO:0016934 GO:GO:0007340 GO:GO:0060013 GO:GO:0034707
GO:GO:0007628 GO:GO:2000344 GO:GO:0001964 GO:GO:0050884
HOVERGEN:HBG051707 eggNOG:NOG265706 EMBL:AF268375 EMBL:AF268366
EMBL:AF268358 EMBL:AF268360 EMBL:AF268361 EMBL:AF268359
EMBL:AF268362 EMBL:AF268364 EMBL:AF268365 EMBL:AF268363
IPI:IPI00700898 IPI:IPI00807328 RefSeq:NP_776746.1 UniGene:Bt.5559
ProteinModelPortal:P57695 SMR:P57695 PRIDE:P57695
Ensembl:ENSBTAT00000019143 GeneID:281783 KEGG:bta:281783 CTD:2741
GeneTree:ENSGT00550000074453 HOGENOM:HOG000231336 InParanoid:P57695
KO:K05193 OMA:NTANPVP OrthoDB:EOG4TF0KF NextBio:20805696
GO:GO:0016594 GO:GO:0030977 GO:GO:0022824 GO:GO:0051970
GO:GO:0060012 Uniprot:P57695
Length = 457
Score = 240 (89.5 bits), Expect = 8.0e-29, Sum P(2) = 8.0e-29
Identities = 45/116 (38%), Positives = 71/116 (61%)
Query: 88 DMLFSTRS-RAYMYSSLTLTFILNRQYGFYLMDFYAPSILLVCISWVSFWMAPDAVPGRT 146
D+ + T+ ++ + F L RQ G+YL+ Y PS+L+V +SW+SFW+ DA P R
Sbjct: 222 DLRYCTKHYNTGKFTCIEARFHLERQMGYYLIQMYIPSLLIVILSWISFWINMDAAPARV 281
Query: 147 ILGASTMLTFFQLGIETGSSLPNVSYIRSNDVWFFACTVFIFLSLAEFAFVNTIWR 202
LG +T+LT + +SLP VSY+++ D+W C +F+F +L E+A VN + R
Sbjct: 282 GLGITTVLTMTTQSSGSRASLPKVSYVKAIDIWMAVCLLFVFSALLEYAAVNFVSR 337
Score = 107 (42.7 bits), Expect = 8.0e-29, Sum P(2) = 8.0e-29
Identities = 20/77 (25%), Positives = 42/77 (54%)
Query: 18 EFKVQLLLQLHWKDPRLEYRHYAPHITEMVGERNFIQNIWTPHIYLTNERDSLVLGLYRR 77
+++V + L+ W DPRL Y Y ++ + + + +IW P ++ NE+ + +
Sbjct: 85 DYRVNIFLRQQWNDPRLAYNEYPDDSLDL--DPSMLDSIWKPDLFFANEKGAHFHEITTD 142
Query: 78 DMLVSILPDGDMLFSTR 94
+ L+ I +G++L+S R
Sbjct: 143 NKLLRISRNGNVLYSIR 159
>UNIPROTKB|F1PC16 [details] [associations]
symbol:GLRA1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0045211 "postsynaptic membrane" evidence=IEA]
[GO:0030054 "cell junction" evidence=IEA] [GO:0022824
"transmitter-gated ion channel activity" evidence=IEA] [GO:0016934
"extracellular-glycine-gated chloride channel activity"
evidence=IEA] [GO:0016594 "glycine binding" evidence=IEA]
[GO:0005887 "integral to plasma membrane" evidence=IEA]
InterPro:IPR006028 InterPro:IPR006029 InterPro:IPR006201
InterPro:IPR006202 InterPro:IPR008127 InterPro:IPR008128
InterPro:IPR018000 Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252
PRINTS:PR00253 PRINTS:PR01673 PRINTS:PR01674 PROSITE:PS00236
GO:GO:0005887 GO:GO:0030054 GO:GO:0045211 Gene3D:2.70.170.10
PANTHER:PTHR18945 SUPFAM:SSF90112 SUPFAM:SSF63712
TIGRFAMs:TIGR00860 GO:GO:0016934 CTD:2741
GeneTree:ENSGT00550000074453 KO:K05193 OMA:NTANPVP GO:GO:0016594
GO:GO:0022824 EMBL:AAEX03003083 RefSeq:XP_003434572.1
Ensembl:ENSCAFT00000028284 GeneID:489172 KEGG:cfa:489172
Uniprot:F1PC16
Length = 457
Score = 240 (89.5 bits), Expect = 8.0e-29, Sum P(2) = 8.0e-29
Identities = 45/116 (38%), Positives = 71/116 (61%)
Query: 88 DMLFSTRS-RAYMYSSLTLTFILNRQYGFYLMDFYAPSILLVCISWVSFWMAPDAVPGRT 146
D+ + T+ ++ + F L RQ G+YL+ Y PS+L+V +SW+SFW+ DA P R
Sbjct: 222 DLRYCTKHYNTGKFTCIEARFHLERQMGYYLIQMYIPSLLIVILSWISFWINMDAAPARV 281
Query: 147 ILGASTMLTFFQLGIETGSSLPNVSYIRSNDVWFFACTVFIFLSLAEFAFVNTIWR 202
LG +T+LT + +SLP VSY+++ D+W C +F+F +L E+A VN + R
Sbjct: 282 GLGITTVLTMTTQSSGSRASLPKVSYVKAIDIWMAVCLLFVFSALLEYAAVNFVSR 337
Score = 107 (42.7 bits), Expect = 8.0e-29, Sum P(2) = 8.0e-29
Identities = 20/77 (25%), Positives = 42/77 (54%)
Query: 18 EFKVQLLLQLHWKDPRLEYRHYAPHITEMVGERNFIQNIWTPHIYLTNERDSLVLGLYRR 77
+++V + L+ W DPRL Y Y ++ + + + +IW P ++ NE+ + +
Sbjct: 85 DYRVNIFLRQQWNDPRLAYNEYPDDSLDL--DPSMLDSIWKPDLFFANEKGAHFHEITTD 142
Query: 78 DMLVSILPDGDMLFSTR 94
+ L+ I +G++L+S R
Sbjct: 143 NKLLRISRNGNVLYSIR 159
>UNIPROTKB|P23415 [details] [associations]
symbol:GLRA1 "Glycine receptor subunit alpha-1"
species:9606 "Homo sapiens" [GO:0022824 "transmitter-gated ion
channel activity" evidence=IEA] [GO:0030054 "cell junction"
evidence=IEA] [GO:0034707 "chloride channel complex" evidence=IEA]
[GO:0001508 "regulation of action potential" evidence=IEA]
[GO:0002087 "regulation of respiratory gaseous exchange by
neurological system process" evidence=IEA] [GO:0005783 "endoplasmic
reticulum" evidence=IEA] [GO:0007340 "acrosome reaction"
evidence=IEA] [GO:0007601 "visual perception" evidence=IEA]
[GO:0007628 "adult walking behavior" evidence=IEA] [GO:0009897
"external side of plasma membrane" evidence=IEA] [GO:0050884
"neuromuscular process controlling posture" evidence=IEA]
[GO:0051260 "protein homooligomerization" evidence=IEA] [GO:0051291
"protein heterooligomerization" evidence=IEA] [GO:0060012 "synaptic
transmission, glycinergic" evidence=IEA] [GO:0060013 "righting
reflex" evidence=IEA] [GO:0060080 "regulation of inhibitory
postsynaptic membrane potential" evidence=IEA] [GO:0045211
"postsynaptic membrane" evidence=IEA] [GO:0016934
"extracellular-glycine-gated chloride channel activity"
evidence=IGI;IMP;IDA] [GO:0005887 "integral to plasma membrane"
evidence=IMP;IDA;NAS] [GO:0006811 "ion transport" evidence=IDA]
[GO:0007218 "neuropeptide signaling pathway" evidence=IDA]
[GO:0030977 "taurine binding" evidence=IDA] [GO:0005515 "protein
binding" evidence=IPI] [GO:0001964 "startle response" evidence=IMP]
[GO:0006821 "chloride transport" evidence=IDA] [GO:0043231
"intracellular membrane-bounded organelle" evidence=IDA]
[GO:0006936 "muscle contraction" evidence=IMP] [GO:0016021
"integral to membrane" evidence=NAS] [GO:0051970 "negative
regulation of transmission of nerve impulse" evidence=IMP]
[GO:0016594 "glycine binding" evidence=IDA] [GO:2000344 "positive
regulation of acrosome reaction" evidence=IMP] [GO:0042391
"regulation of membrane potential" evidence=IMP] [GO:0005886
"plasma membrane" evidence=TAS] [GO:0034220 "ion transmembrane
transport" evidence=TAS] [GO:0055085 "transmembrane transport"
evidence=TAS] Reactome:REACT_15518 InterPro:IPR006028
InterPro:IPR006029 InterPro:IPR006201 InterPro:IPR006202
InterPro:IPR008127 InterPro:IPR008128 InterPro:IPR018000
Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252 PRINTS:PR00253
PRINTS:PR01673 PRINTS:PR01674 PROSITE:PS00236 GO:GO:0043231
GO:GO:0005887 EMBL:CH471062 GO:GO:0009897 GO:GO:0030054
GO:GO:0045211 Gene3D:2.70.170.10 PANTHER:PTHR18945 SUPFAM:SSF90112
SUPFAM:SSF63712 TIGRFAMs:TIGR00860 GO:GO:0007218 GO:GO:0007601
GO:GO:0002087 GO:GO:0060080 GO:GO:0042391 GO:GO:0001508
GO:GO:0006936 GO:GO:0016934 GO:GO:0007340 GO:GO:0060013
DrugBank:DB00145 DrugBank:DB01159 GO:GO:0034707 GO:GO:0007628
DrugBank:DB01189 DrugBank:DB00228 DrugBank:DB00753 DrugBank:DB01028
DrugBank:DB01236 GO:GO:2000344 GO:GO:0001964 GO:GO:0050884
DrugBank:DB00898 HOVERGEN:HBG051707 eggNOG:NOG265706 Orphanet:3197
CTD:2741 HOGENOM:HOG000231336 KO:K05193 OMA:NTANPVP
OrthoDB:EOG4TF0KF GO:GO:0016594 GO:GO:0030977 GO:GO:0022824
GO:GO:0051970 GO:GO:0060012 EMBL:X52009 EMBL:AK312702 EMBL:BC074980
EMBL:BC114947 IPI:IPI00011565 IPI:IPI00795343 PIR:S12382
RefSeq:NP_000162.2 RefSeq:NP_001139512.1 UniGene:Hs.121490 PDB:1MOT
PDB:1VRY PDBsum:1MOT PDBsum:1VRY ProteinModelPortal:P23415
SMR:P23415 DIP:DIP-48768N STRING:P23415 TCDB:1.A.9.3.1
PhosphoSite:P23415 DMDM:116242495 PRIDE:P23415
Ensembl:ENST00000274576 Ensembl:ENST00000455880 GeneID:2741
KEGG:hsa:2741 UCSC:uc003lur.3 UCSC:uc003lut.3 GeneCards:GC05M151182
HGNC:HGNC:4326 HPA:HPA016502 MIM:138491 MIM:149400
neXtProt:NX_P23415 PharmGKB:PA28727 InParanoid:P23415
BindingDB:P23415 ChEMBL:CHEMBL5845 EvolutionaryTrace:P23415
GenomeRNAi:2741 NextBio:10804 ArrayExpress:P23415 Bgee:P23415
CleanEx:HS_GLRA1 Genevestigator:P23415 GermOnline:ENSG00000145888
Uniprot:P23415
Length = 457
Score = 240 (89.5 bits), Expect = 8.0e-29, Sum P(2) = 8.0e-29
Identities = 45/116 (38%), Positives = 71/116 (61%)
Query: 88 DMLFSTRS-RAYMYSSLTLTFILNRQYGFYLMDFYAPSILLVCISWVSFWMAPDAVPGRT 146
D+ + T+ ++ + F L RQ G+YL+ Y PS+L+V +SW+SFW+ DA P R
Sbjct: 222 DLRYCTKHYNTGKFTCIEARFHLERQMGYYLIQMYIPSLLIVILSWISFWINMDAAPARV 281
Query: 147 ILGASTMLTFFQLGIETGSSLPNVSYIRSNDVWFFACTVFIFLSLAEFAFVNTIWR 202
LG +T+LT + +SLP VSY+++ D+W C +F+F +L E+A VN + R
Sbjct: 282 GLGITTVLTMTTQSSGSRASLPKVSYVKAIDIWMAVCLLFVFSALLEYAAVNFVSR 337
Score = 107 (42.7 bits), Expect = 8.0e-29, Sum P(2) = 8.0e-29
Identities = 20/77 (25%), Positives = 42/77 (54%)
Query: 18 EFKVQLLLQLHWKDPRLEYRHYAPHITEMVGERNFIQNIWTPHIYLTNERDSLVLGLYRR 77
+++V + L+ W DPRL Y Y ++ + + + +IW P ++ NE+ + +
Sbjct: 85 DYRVNIFLRQQWNDPRLAYNEYPDDSLDL--DPSMLDSIWKPDLFFANEKGAHFHEITTD 142
Query: 78 DMLVSILPDGDMLFSTR 94
+ L+ I +G++L+S R
Sbjct: 143 NKLLRISRNGNVLYSIR 159
>MGI|MGI:95747 [details] [associations]
symbol:Glra1 "glycine receptor, alpha 1 subunit" species:10090
"Mus musculus" [GO:0001508 "regulation of action potential"
evidence=IMP] [GO:0001964 "startle response" evidence=ISO;IMP]
[GO:0002087 "regulation of respiratory gaseous exchange by
neurological system process" evidence=IMP] [GO:0005216 "ion channel
activity" evidence=IEA] [GO:0005230 "extracellular ligand-gated ion
channel activity" evidence=IEA] [GO:0005254 "chloride channel
activity" evidence=IEA] [GO:0005622 "intracellular" evidence=IDA]
[GO:0005886 "plasma membrane" evidence=IEA] [GO:0005887 "integral
to plasma membrane" evidence=ISO] [GO:0006810 "transport"
evidence=IEA] [GO:0006811 "ion transport" evidence=ISO] [GO:0006820
"anion transport" evidence=ISO] [GO:0006821 "chloride transport"
evidence=ISO;IMP;IDA] [GO:0006936 "muscle contraction"
evidence=ISO] [GO:0007218 "neuropeptide signaling pathway"
evidence=ISO] [GO:0007268 "synaptic transmission" evidence=IMP]
[GO:0007340 "acrosome reaction" evidence=IMP] [GO:0007601 "visual
perception" evidence=IMP] [GO:0007628 "adult walking behavior"
evidence=IMP] [GO:0009897 "external side of plasma membrane"
evidence=IDA] [GO:0016020 "membrane" evidence=IDA] [GO:0016021
"integral to membrane" evidence=IEA] [GO:0016594 "glycine binding"
evidence=ISO;IDA;IMP] [GO:0016933 "extracellular-glycine-gated ion
channel activity" evidence=ISO] [GO:0016934
"extracellular-glycine-gated chloride channel activity"
evidence=ISO;IMP;IDA] [GO:0022824 "transmitter-gated ion channel
activity" evidence=IEA] [GO:0030054 "cell junction" evidence=IEA]
[GO:0030977 "taurine binding" evidence=ISO] [GO:0034220 "ion
transmembrane transport" evidence=ISO;IMP;IDA] [GO:0034707
"chloride channel complex" evidence=IEA] [GO:0042391 "regulation of
membrane potential" evidence=ISO;IMP;IDA] [GO:0043231
"intracellular membrane-bounded organelle" evidence=ISO]
[GO:0043576 "regulation of respiratory gaseous exchange"
evidence=IMP] [GO:0045202 "synapse" evidence=IEA] [GO:0045211
"postsynaptic membrane" evidence=IDA] [GO:0050884 "neuromuscular
process controlling posture" evidence=IMP] [GO:0050905
"neuromuscular process" evidence=IMP] [GO:0051260 "protein
homooligomerization" evidence=ISO] [GO:0051291 "protein
heterooligomerization" evidence=ISO] [GO:0051970 "negative
regulation of transmission of nerve impulse" evidence=ISO]
[GO:0060012 "synaptic transmission, glycinergic" evidence=ISO;IMP]
[GO:0060013 "righting reflex" evidence=IMP] [GO:0060080 "regulation
of inhibitory postsynaptic membrane potential" evidence=IMP]
[GO:2000344 "positive regulation of acrosome reaction"
evidence=ISO] InterPro:IPR006028 InterPro:IPR006029
InterPro:IPR006201 InterPro:IPR006202 InterPro:IPR008127
InterPro:IPR008128 InterPro:IPR018000 Pfam:PF02931 Pfam:PF02932
PRINTS:PR00252 PRINTS:PR00253 PRINTS:PR01673 PRINTS:PR01674
PROSITE:PS00236 MGI:MGI:95747 GO:GO:0043231 GO:GO:0005887
GO:GO:0009897 GO:GO:0030054 GO:GO:0045211 Gene3D:2.70.170.10
PANTHER:PTHR18945 SUPFAM:SSF90112 SUPFAM:SSF63712
TIGRFAMs:TIGR00860 GO:GO:0007218 GO:GO:0007601 GO:GO:0002087
GO:GO:0060080 GO:GO:0001508 GO:GO:0006936 GO:GO:0016934
GO:GO:0007340 GO:GO:0060013 GO:GO:0034707 GO:GO:0007628
EMBL:AL596207 GO:GO:2000344 GO:GO:0001964 GO:GO:0050884
HOVERGEN:HBG051707 eggNOG:NOG265706 GeneTree:ENSGT00550000074453
HOGENOM:HOG000231336 OMA:NTANPVP GO:GO:0016594 GO:GO:0030977
GO:GO:0022824 GO:GO:0051970 GO:GO:0060012 EMBL:S73717 EMBL:S73718
EMBL:X75832 EMBL:X75833 EMBL:X75834 EMBL:X75835 EMBL:X75836
EMBL:X75837 EMBL:X75838 EMBL:X75839 EMBL:X75840 IPI:IPI00405549
IPI:IPI00466207 PIR:C49970 UniGene:Mm.89320
ProteinModelPortal:Q64018 SMR:Q64018 STRING:Q64018
PhosphoSite:Q64018 PRIDE:Q64018 Ensembl:ENSMUST00000075603
Ensembl:ENSMUST00000102716 InParanoid:Q5NCT8 Bgee:Q64018
CleanEx:MM_GLRA1 Genevestigator:Q64018
GermOnline:ENSMUSG00000000263 Uniprot:Q64018
Length = 457
Score = 240 (89.5 bits), Expect = 8.0e-29, Sum P(2) = 8.0e-29
Identities = 45/116 (38%), Positives = 71/116 (61%)
Query: 88 DMLFSTRS-RAYMYSSLTLTFILNRQYGFYLMDFYAPSILLVCISWVSFWMAPDAVPGRT 146
D+ + T+ ++ + F L RQ G+YL+ Y PS+L+V +SW+SFW+ DA P R
Sbjct: 222 DLRYCTKHYNTGKFTCIEARFHLERQMGYYLIQMYIPSLLIVILSWISFWINMDAAPARV 281
Query: 147 ILGASTMLTFFQLGIETGSSLPNVSYIRSNDVWFFACTVFIFLSLAEFAFVNTIWR 202
LG +T+LT + +SLP VSY+++ D+W C +F+F +L E+A VN + R
Sbjct: 282 GLGITTVLTMTTQSSGSRASLPKVSYVKAIDIWMAVCLLFVFSALLEYAAVNFVSR 337
Score = 107 (42.7 bits), Expect = 8.0e-29, Sum P(2) = 8.0e-29
Identities = 20/77 (25%), Positives = 42/77 (54%)
Query: 18 EFKVQLLLQLHWKDPRLEYRHYAPHITEMVGERNFIQNIWTPHIYLTNERDSLVLGLYRR 77
+++V + L+ W DPRL Y Y ++ + + + +IW P ++ NE+ + +
Sbjct: 85 DYRVNIFLRQQWNDPRLAYNEYPDDSLDL--DPSMLDSIWKPDLFFANEKGAHFHEITTD 142
Query: 78 DMLVSILPDGDMLFSTR 94
+ L+ I +G++L+S R
Sbjct: 143 NKLLRISRNGNVLYSIR 159
>RGD|2704 [details] [associations]
symbol:Glra1 "glycine receptor, alpha 1" species:10116 "Rattus
norvegicus" [GO:0001508 "regulation of action potential"
evidence=IEA;ISO] [GO:0001964 "startle response" evidence=ISO;ISS]
[GO:0002087 "regulation of respiratory gaseous exchange by
neurological system process" evidence=IEA;ISO] [GO:0005622
"intracellular" evidence=ISO] [GO:0005783 "endoplasmic reticulum"
evidence=IDA] [GO:0005887 "integral to plasma membrane"
evidence=ISO;ISS] [GO:0006811 "ion transport" evidence=ISO;ISS]
[GO:0006820 "anion transport" evidence=IDA] [GO:0006821 "chloride
transport" evidence=ISO;ISS;IDA] [GO:0006936 "muscle contraction"
evidence=ISO;ISS] [GO:0007218 "neuropeptide signaling pathway"
evidence=ISO;ISS] [GO:0007268 "synaptic transmission" evidence=ISO]
[GO:0007340 "acrosome reaction" evidence=IEA;ISO] [GO:0007601 "visual
perception" evidence=IEA;ISO] [GO:0007628 "adult walking behavior"
evidence=IEA;ISO] [GO:0009897 "external side of plasma membrane"
evidence=ISO;IDA] [GO:0016020 "membrane" evidence=ISO;IDA]
[GO:0016594 "glycine binding" evidence=ISO;ISS;IDA] [GO:0016933
"extracellular-glycine-gated ion channel activity" evidence=IDA]
[GO:0016934 "extracellular-glycine-gated chloride channel activity"
evidence=ISO;ISS;IDA] [GO:0022824 "transmitter-gated ion channel
activity" evidence=IEA] [GO:0030054 "cell junction" evidence=IEA]
[GO:0030977 "taurine binding" evidence=ISO;ISS] [GO:0034220 "ion
transmembrane transport" evidence=ISO] [GO:0034707 "chloride channel
complex" evidence=IEA] [GO:0042391 "regulation of membrane potential"
evidence=ISO] [GO:0043231 "intracellular membrane-bounded organelle"
evidence=ISO;ISS] [GO:0043576 "regulation of respiratory gaseous
exchange" evidence=ISO] [GO:0045211 "postsynaptic membrane"
evidence=IEA;ISO] [GO:0050884 "neuromuscular process controlling
posture" evidence=IEA;ISO] [GO:0050905 "neuromuscular process"
evidence=ISO] [GO:0051260 "protein homooligomerization" evidence=IDA]
[GO:0051291 "protein heterooligomerization" evidence=IDA] [GO:0051970
"negative regulation of transmission of nerve impulse"
evidence=ISO;ISS] [GO:0060012 "synaptic transmission, glycinergic"
evidence=ISO;IDA] [GO:0060013 "righting reflex" evidence=IEA;ISO]
[GO:0060080 "regulation of inhibitory postsynaptic membrane
potential" evidence=IEA;ISO] [GO:2000344 "positive regulation of
acrosome reaction" evidence=IEA;ISO] InterPro:IPR006028
InterPro:IPR006029 InterPro:IPR006201 InterPro:IPR006202
InterPro:IPR008127 InterPro:IPR008128 InterPro:IPR018000 Pfam:PF02931
Pfam:PF02932 PRINTS:PR00252 PRINTS:PR00253 PRINTS:PR01673
PRINTS:PR01674 PROSITE:PS00236 RGD:2704 GO:GO:0005783 GO:GO:0051291
GO:GO:0005887 GO:GO:0009897 GO:GO:0030054 GO:GO:0045211
Gene3D:2.70.170.10 PANTHER:PTHR18945 SUPFAM:SSF90112 SUPFAM:SSF63712
TIGRFAMs:TIGR00860 GO:GO:0007218 GO:GO:0051260 GO:GO:0006936
GO:GO:0016934 GO:GO:0034707 GO:GO:0001964 HOVERGEN:HBG051707
eggNOG:NOG265706 CTD:2741 HOGENOM:HOG000231336 KO:K05193
OrthoDB:EOG4TF0KF GO:GO:0016594 GO:GO:0030977 GO:GO:0022824
GO:GO:0051970 GO:GO:0060012 EMBL:D00833 EMBL:X55246 EMBL:M63915
EMBL:AJ310835 EMBL:Y00276 IPI:IPI00206855 IPI:IPI00324218 PIR:JN0014
PIR:S20662 RefSeq:NP_037265.1 UniGene:Rn.10109
ProteinModelPortal:P07727 SMR:P07727 DIP:DIP-48879N STRING:P07727
Ensembl:ENSRNOT00000063889 GeneID:25674 KEGG:rno:25674 UCSC:RGD:2704
InParanoid:P07727 BindingDB:P07727 ChEMBL:CHEMBL3246 NextBio:607619
ArrayExpress:P07727 Genevestigator:P07727
GermOnline:ENSRNOG00000013588 Uniprot:P07727
Length = 457
Score = 240 (89.5 bits), Expect = 8.0e-29, Sum P(2) = 8.0e-29
Identities = 45/116 (38%), Positives = 71/116 (61%)
Query: 88 DMLFSTRS-RAYMYSSLTLTFILNRQYGFYLMDFYAPSILLVCISWVSFWMAPDAVPGRT 146
D+ + T+ ++ + F L RQ G+YL+ Y PS+L+V +SW+SFW+ DA P R
Sbjct: 222 DLRYCTKHYNTGKFTCIEARFHLERQMGYYLIQMYIPSLLIVILSWISFWINMDAAPARV 281
Query: 147 ILGASTMLTFFQLGIETGSSLPNVSYIRSNDVWFFACTVFIFLSLAEFAFVNTIWR 202
LG +T+LT + +SLP VSY+++ D+W C +F+F +L E+A VN + R
Sbjct: 282 GLGITTVLTMTTQSSGSRASLPKVSYVKAIDIWMAVCLLFVFSALLEYAAVNFVSR 337
Score = 107 (42.7 bits), Expect = 8.0e-29, Sum P(2) = 8.0e-29
Identities = 20/77 (25%), Positives = 42/77 (54%)
Query: 18 EFKVQLLLQLHWKDPRLEYRHYAPHITEMVGERNFIQNIWTPHIYLTNERDSLVLGLYRR 77
+++V + L+ W DPRL Y Y ++ + + + +IW P ++ NE+ + +
Sbjct: 85 DYRVNIFLRQQWNDPRLAYNEYPDDSLDL--DPSMLDSIWKPDLFFANEKGAHFHEITTD 142
Query: 78 DMLVSILPDGDMLFSTR 94
+ L+ I +G++L+S R
Sbjct: 143 NKLLRISRNGNVLYSIR 159
>ZFIN|ZDB-GENE-010410-3 [details] [associations]
symbol:glra4a "glycine receptor, alpha 4a"
species:7955 "Danio rerio" [GO:0016594 "glycine binding"
evidence=IEA] [GO:0045211 "postsynaptic membrane" evidence=IEA]
[GO:0005230 "extracellular ligand-gated ion channel activity"
evidence=IEA] [GO:0006811 "ion transport" evidence=IEA] [GO:0016020
"membrane" evidence=IEA] [GO:0016021 "integral to membrane"
evidence=IEA] [GO:0016934 "extracellular-glycine-gated chloride
channel activity" evidence=IEA;IDA] [GO:0005887 "integral to plasma
membrane" evidence=IEA] [GO:0006821 "chloride transport"
evidence=IEA;IDA] [GO:0022824 "transmitter-gated ion channel
activity" evidence=IEA] [GO:0006810 "transport" evidence=IEA]
[GO:0043200 "response to amino acid stimulus" evidence=IDA]
[GO:0007417 "central nervous system development" evidence=IMP]
[GO:0045664 "regulation of neuron differentiation" evidence=IMP]
[GO:0045202 "synapse" evidence=IEA] [GO:0030054 "cell junction"
evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
InterPro:IPR006028 InterPro:IPR006029 InterPro:IPR006201
InterPro:IPR006202 InterPro:IPR008127 InterPro:IPR018000
Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252 PRINTS:PR00253
PRINTS:PR01673 PROSITE:PS00236 ZFIN:ZDB-GENE-010410-3 GO:GO:0045664
GO:GO:0005887 GO:GO:0030054 GO:GO:0045211 Gene3D:2.70.170.10
PANTHER:PTHR18945 SUPFAM:SSF90112 SUPFAM:SSF63712
TIGRFAMs:TIGR00860 GO:GO:0007417 GO:GO:0016934 GO:GO:0043200
HOVERGEN:HBG051707 eggNOG:NOG265706 HOGENOM:HOG000231336
GO:GO:0016594 GO:GO:0022824 OrthoDB:EOG4WWRJJ EMBL:BC090676
EMBL:GQ406229 IPI:IPI00496864 UniGene:Dr.82595 SMR:Q5CZW5
Uniprot:Q5CZW5
Length = 457
Score = 243 (90.6 bits), Expect = 9.5e-29, Sum P(2) = 9.5e-29
Identities = 44/103 (42%), Positives = 67/103 (65%)
Query: 100 YSSLTLTFILNRQYGFYLMDFYAPSILLVCISWVSFWMAPDAVPGRTILGASTMLTFFQL 159
++ + + F L RQ G+YL+ Y PS+L+V +SWVSFW+ DA P R LG +T+LT
Sbjct: 241 FTCIEVKFHLERQMGYYLIQMYIPSLLIVILSWVSFWINMDAAPARVGLGITTVLTMTTQ 300
Query: 160 GIETGSSLPNVSYIRSNDVWFFACTVFIFLSLAEFAFVNTIWR 202
+ +SLP VSY+++ D+W C +F+F +L E+A VN + R
Sbjct: 301 SSGSRASLPKVSYVKAIDIWMAVCLLFVFAALLEYAAVNFVSR 343
Score = 103 (41.3 bits), Expect = 9.5e-29, Sum P(2) = 9.5e-29
Identities = 19/77 (24%), Positives = 42/77 (54%)
Query: 18 EFKVQLLLQLHWKDPRLEYRHYAPHITEMVGERNFIQNIWTPHIYLTNERDSLVLGLYRR 77
++++ + L+ W DPRL Y Y ++ + + + +IW P ++ NE+ + +
Sbjct: 91 DYRLNVFLRQQWNDPRLAYSEYPDASLDL--DPSMLDSIWKPDLFFANEKGANFHEVTTD 148
Query: 78 DMLVSILPDGDMLFSTR 94
+ L+ I +G++L+S R
Sbjct: 149 NKLLRIFQNGNVLYSIR 165
>UNIPROTKB|F1Q344 [details] [associations]
symbol:GABRD "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0045211 "postsynaptic membrane" evidence=IEA]
[GO:0030054 "cell junction" evidence=IEA] [GO:0016021 "integral to
membrane" evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0005230 "extracellular ligand-gated ion channel activity"
evidence=IEA] InterPro:IPR006028 InterPro:IPR006029
InterPro:IPR006201 InterPro:IPR006202 InterPro:IPR018000
Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252 PRINTS:PR00253
PROSITE:PS00236 GO:GO:0016021 GO:GO:0005886 GO:GO:0030054
GO:GO:0045211 GO:GO:0005230 Gene3D:2.70.170.10 PANTHER:PTHR18945
SUPFAM:SSF90112 SUPFAM:SSF63712 TIGRFAMs:TIGR00860 OMA:EYTMTVF
GeneTree:ENSGT00630000089571 EMBL:AAEX03003861
Ensembl:ENSCAFT00000035570 Uniprot:F1Q344
Length = 488
Score = 239 (89.2 bits), Expect = 1.2e-28, Sum P(2) = 1.2e-28
Identities = 48/102 (47%), Positives = 66/102 (64%)
Query: 97 AYMYSSLTLTFILNRQYGFYLMDFYAPSILLVCISWVSFWMAPDAVPGRTILGASTMLTF 156
A + L+L F L R G Y++ Y PSILLV +SWVSFW++ AVP R LG +T+LT
Sbjct: 263 AGQFPRLSLHFHLRRNRGVYIIQSYMPSILLVAMSWVSFWISQAAVPARVSLGITTVLTM 322
Query: 157 FQLGIETGSSLPNVSYIRSNDVWFFACTVFIFLSLAEFAFVN 198
L + SSLP S I++ DV+F+ C VF+F +L E+AF +
Sbjct: 323 TTLMVSARSSLPRASAIKALDVYFWICYVFVFAALVEYAFAH 364
Score = 108 (43.1 bits), Expect = 1.2e-28, Sum P(2) = 1.2e-28
Identities = 22/79 (27%), Positives = 40/79 (50%)
Query: 17 QEFKVQLLLQLHWKDPRLEYRHYAPHITEMVG-ERNFIQNIWTPHIYLTNERDSLVLGLY 75
QE+ + + L W+D RL Y H E +G + F+ +W P ++ N + + +
Sbjct: 115 QEYTMTVFLHQSWRDSRLAYNH----TNETLGLDSRFVDKLWLPDTFIVNAKSAWFHDVT 170
Query: 76 RRDMLVSILPDGDMLFSTR 94
+ L+ + PDG +L+S R
Sbjct: 171 VENKLIRLQPDGVILYSIR 189
>UNIPROTKB|A2VE38 [details] [associations]
symbol:GABRD "Gamma-aminobutyric acid (GABA) A receptor,
delta" species:9913 "Bos taurus" [GO:0045211 "postsynaptic
membrane" evidence=IEA] [GO:0030054 "cell junction" evidence=IEA]
[GO:0016021 "integral to membrane" evidence=IEA] [GO:0005886
"plasma membrane" evidence=IEA] [GO:0005230 "extracellular
ligand-gated ion channel activity" evidence=IEA] [GO:0004890
"GABA-A receptor activity" evidence=IEA] InterPro:IPR006028
InterPro:IPR006029 InterPro:IPR006201 InterPro:IPR006202
InterPro:IPR008098 InterPro:IPR018000 Pfam:PF02931 Pfam:PF02932
PRINTS:PR00252 PRINTS:PR00253 PRINTS:PR01722 PROSITE:PS00236
GO:GO:0016021 GO:GO:0005886 GO:GO:0030054 GO:GO:0045211
GO:GO:0005230 GO:GO:0004890 Gene3D:2.70.170.10 PANTHER:PTHR18945
SUPFAM:SSF90112 SUPFAM:SSF63712 TIGRFAMs:TIGR00860
HOVERGEN:HBG051707 HOGENOM:HOG000231335 CTD:2563 eggNOG:NOG308574
KO:K05184 OMA:EYTMTVF OrthoDB:EOG4H9XKN
GeneTree:ENSGT00630000089571 EMBL:DAAA02043224 EMBL:BC133557
IPI:IPI00710785 RefSeq:NP_001075184.1 UniGene:Bt.25568
Ensembl:ENSBTAT00000011434 GeneID:508711 KEGG:bta:508711
InParanoid:A2VE38 NextBio:20868645 Uniprot:A2VE38
Length = 450
Score = 238 (88.8 bits), Expect = 1.5e-28, Sum P(2) = 1.5e-28
Identities = 47/102 (46%), Positives = 66/102 (64%)
Query: 97 AYMYSSLTLTFILNRQYGFYLMDFYAPSILLVCISWVSFWMAPDAVPGRTILGASTMLTF 156
A + L+L F L R G Y++ Y PS+LLV +SWVSFW++ AVP R LG +T+LT
Sbjct: 230 AGQFPRLSLHFHLRRNRGVYIIQSYMPSVLLVAMSWVSFWISQAAVPARVSLGITTVLTM 289
Query: 157 FQLGIETGSSLPNVSYIRSNDVWFFACTVFIFLSLAEFAFVN 198
L + SSLP S I++ DV+F+ C VF+F +L E+AF +
Sbjct: 290 TTLMVSARSSLPRASAIKALDVYFWICYVFVFAALVEYAFAH 331
Score = 106 (42.4 bits), Expect = 1.5e-28, Sum P(2) = 1.5e-28
Identities = 23/91 (25%), Positives = 45/91 (49%)
Query: 6 KLVDIGNLS-FQQEFKVQLLLQLHWKDPRLEYRHYAPHITEMVG-ERNFIQNIWTPHIYL 63
++ I ++S E+ + + L W+D RL Y H E +G + F+ +W P ++
Sbjct: 70 EVASIDHISEVNMEYTMTVFLHQSWRDSRLSYNH----TNETLGLDSRFVDKLWLPDTFI 125
Query: 64 TNERDSLVLGLYRRDMLVSILPDGDMLFSTR 94
N + + + + L+ + PDG +L+S R
Sbjct: 126 VNAKSAWFHDVTVENKLIRLQPDGVILYSIR 156
>UNIPROTKB|E2R3M6 [details] [associations]
symbol:GABRD "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0045211 "postsynaptic membrane" evidence=IEA]
[GO:0030054 "cell junction" evidence=IEA] [GO:0016021 "integral to
membrane" evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0005230 "extracellular ligand-gated ion channel activity"
evidence=IEA] [GO:0004890 "GABA-A receptor activity" evidence=IEA]
InterPro:IPR006028 InterPro:IPR006029 InterPro:IPR006201
InterPro:IPR006202 InterPro:IPR008098 InterPro:IPR018000
Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252 PRINTS:PR00253
PRINTS:PR01722 PROSITE:PS00236 GO:GO:0016021 GO:GO:0005886
GO:GO:0030054 GO:GO:0045211 GO:GO:0005230 GO:GO:0004890
Gene3D:2.70.170.10 PANTHER:PTHR18945 SUPFAM:SSF90112
SUPFAM:SSF63712 TIGRFAMs:TIGR00860 CTD:2563 KO:K05184
GeneTree:ENSGT00630000089571 EMBL:AAEX03003861 RefSeq:XP_546729.3
ProteinModelPortal:E2R3M6 Ensembl:ENSCAFT00000030791 GeneID:489609
KEGG:cfa:489609 NextBio:20862765 Uniprot:E2R3M6
Length = 456
Score = 239 (89.2 bits), Expect = 1.7e-28, Sum P(2) = 1.7e-28
Identities = 48/102 (47%), Positives = 66/102 (64%)
Query: 97 AYMYSSLTLTFILNRQYGFYLMDFYAPSILLVCISWVSFWMAPDAVPGRTILGASTMLTF 156
A + L+L F L R G Y++ Y PSILLV +SWVSFW++ AVP R LG +T+LT
Sbjct: 231 AGQFPRLSLHFHLRRNRGVYIIQSYMPSILLVAMSWVSFWISQAAVPARVSLGITTVLTM 290
Query: 157 FQLGIETGSSLPNVSYIRSNDVWFFACTVFIFLSLAEFAFVN 198
L + SSLP S I++ DV+F+ C VF+F +L E+AF +
Sbjct: 291 TTLMVSARSSLPRASAIKALDVYFWICYVFVFAALVEYAFAH 332
Score = 105 (42.0 bits), Expect = 1.7e-28, Sum P(2) = 1.7e-28
Identities = 23/91 (25%), Positives = 45/91 (49%)
Query: 6 KLVDIGNLS-FQQEFKVQLLLQLHWKDPRLEYRHYAPHITEMVG-ERNFIQNIWTPHIYL 63
++ I ++S E+ + + L W+D RL Y H E +G + F+ +W P ++
Sbjct: 71 EVASIDHISEVNMEYTMTVFLHQSWRDSRLAYNH----TNETLGLDSRFVDKLWLPDTFI 126
Query: 64 TNERDSLVLGLYRRDMLVSILPDGDMLFSTR 94
N + + + + L+ + PDG +L+S R
Sbjct: 127 VNAKSAWFHDVTVENKLIRLQPDGVILYSIR 157
>UNIPROTKB|G5E5K0 [details] [associations]
symbol:GLRA2 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0007218 "neuropeptide signaling pathway" evidence=IEA]
[GO:0045211 "postsynaptic membrane" evidence=IEA] [GO:0030054 "cell
junction" evidence=IEA] [GO:0022824 "transmitter-gated ion channel
activity" evidence=IEA] [GO:0016934 "extracellular-glycine-gated
chloride channel activity" evidence=IEA] [GO:0016594 "glycine
binding" evidence=IEA] [GO:0005887 "integral to plasma membrane"
evidence=IEA] InterPro:IPR006028 InterPro:IPR006029
InterPro:IPR006201 InterPro:IPR006202 InterPro:IPR008127
InterPro:IPR008129 InterPro:IPR018000 Pfam:PF02931 Pfam:PF02932
PRINTS:PR00252 PRINTS:PR00253 PRINTS:PR01673 PRINTS:PR01675
PROSITE:PS00236 GO:GO:0005887 GO:GO:0030054 GO:GO:0045211
Gene3D:2.70.170.10 PANTHER:PTHR18945 SUPFAM:SSF90112
SUPFAM:SSF63712 TIGRFAMs:TIGR00860 GO:GO:0007218 GO:GO:0016934
GeneTree:ENSGT00550000074453 GO:GO:0016594 GO:GO:0022824 CTD:2742
KO:K05194 OMA:TTLFAFF EMBL:DAAA02074899 EMBL:DAAA02074900
RefSeq:NP_001179843.1 UniGene:Bt.74452 ProteinModelPortal:G5E5K0
Ensembl:ENSBTAT00000022869 GeneID:537660 KEGG:bta:537660
NextBio:20877182 Uniprot:G5E5K0
Length = 452
Score = 246 (91.7 bits), Expect = 1.7e-28, Sum P(2) = 1.7e-28
Identities = 44/103 (42%), Positives = 67/103 (65%)
Query: 100 YSSLTLTFILNRQYGFYLMDFYAPSILLVCISWVSFWMAPDAVPGRTILGASTMLTFFQL 159
++ + + F L RQ G+YL+ Y PS+L+V +SWVSFW+ DA P R LG +T+LT
Sbjct: 241 FTCIEVKFHLERQMGYYLIQMYIPSLLIVILSWVSFWINMDAAPARVALGITTVLTMTTQ 300
Query: 160 GIETGSSLPNVSYIRSNDVWFFACTVFIFLSLAEFAFVNTIWR 202
+ +SLP VSY+++ D+W C +F+F +L E+A VN + R
Sbjct: 301 SSGSRASLPKVSYVKAIDIWMAVCLLFVFAALLEYAAVNFVSR 343
Score = 97 (39.2 bits), Expect = 1.7e-28, Sum P(2) = 1.7e-28
Identities = 19/77 (24%), Positives = 40/77 (51%)
Query: 18 EFKVQLLLQLHWKDPRLEYRHYAPHITEMVGERNFIQNIWTPHIYLTNERDSLVLGLYRR 77
+++V + L+ W D RL Y Y ++ + + + +IW P ++ NE+ + +
Sbjct: 91 DYRVNIFLRQQWNDSRLAYSEYPDDSLDL--DPSMLDSIWKPDLFFANEKGANFHDVTTD 148
Query: 78 DMLVSILPDGDMLFSTR 94
+ L+ I +G +L+S R
Sbjct: 149 NKLLRISKNGKVLYSIR 165
>UNIPROTKB|F6Y3F7 [details] [associations]
symbol:GLRA2 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0045211 "postsynaptic membrane" evidence=IEA]
[GO:0030054 "cell junction" evidence=IEA] [GO:0022824
"transmitter-gated ion channel activity" evidence=IEA] [GO:0016934
"extracellular-glycine-gated chloride channel activity"
evidence=IEA] [GO:0016594 "glycine binding" evidence=IEA]
[GO:0005887 "integral to plasma membrane" evidence=IEA]
InterPro:IPR006028 InterPro:IPR006029 InterPro:IPR006201
InterPro:IPR006202 InterPro:IPR008127 InterPro:IPR008129
InterPro:IPR018000 Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252
PRINTS:PR00253 PRINTS:PR01673 PRINTS:PR01675 PROSITE:PS00236
GO:GO:0005887 GO:GO:0030054 GO:GO:0045211 Gene3D:2.70.170.10
PANTHER:PTHR18945 SUPFAM:SSF90112 SUPFAM:SSF63712
TIGRFAMs:TIGR00860 GO:GO:0016934 GeneTree:ENSGT00550000074453
GO:GO:0016594 GO:GO:0022824 CTD:2742 KO:K05194 OMA:TTLFAFF
Ensembl:ENSCAFT00000018822 EMBL:AAEX03026154 RefSeq:XP_003435502.1
RefSeq:XP_548866.2 ProteinModelPortal:F6Y3F7 GeneID:491746
KEGG:cfa:491746 Uniprot:F6Y3F7
Length = 452
Score = 246 (91.7 bits), Expect = 1.7e-28, Sum P(2) = 1.7e-28
Identities = 44/103 (42%), Positives = 67/103 (65%)
Query: 100 YSSLTLTFILNRQYGFYLMDFYAPSILLVCISWVSFWMAPDAVPGRTILGASTMLTFFQL 159
++ + + F L RQ G+YL+ Y PS+L+V +SWVSFW+ DA P R LG +T+LT
Sbjct: 241 FTCIEVKFHLERQMGYYLIQMYIPSLLIVILSWVSFWINMDAAPARVALGITTVLTMTTQ 300
Query: 160 GIETGSSLPNVSYIRSNDVWFFACTVFIFLSLAEFAFVNTIWR 202
+ +SLP VSY+++ D+W C +F+F +L E+A VN + R
Sbjct: 301 SSGSRASLPKVSYVKAIDIWMAVCLLFVFAALLEYAAVNFVSR 343
Score = 97 (39.2 bits), Expect = 1.7e-28, Sum P(2) = 1.7e-28
Identities = 19/77 (24%), Positives = 40/77 (51%)
Query: 18 EFKVQLLLQLHWKDPRLEYRHYAPHITEMVGERNFIQNIWTPHIYLTNERDSLVLGLYRR 77
+++V + L+ W D RL Y Y ++ + + + +IW P ++ NE+ + +
Sbjct: 91 DYRVNIFLRQQWNDSRLAYSEYPDDSLDL--DPSMLDSIWKPDLFFANEKGANFHDVTTD 148
Query: 78 DMLVSILPDGDMLFSTR 94
+ L+ I +G +L+S R
Sbjct: 149 NKLLRISKNGKVLYSIR 165
>UNIPROTKB|P23416 [details] [associations]
symbol:GLRA2 "Glycine receptor subunit alpha-2"
species:9606 "Homo sapiens" [GO:0022824 "transmitter-gated ion
channel activity" evidence=IEA] [GO:0030054 "cell junction"
evidence=IEA] [GO:0034707 "chloride channel complex" evidence=IEA]
[GO:0007416 "synapse assembly" evidence=IEA] [GO:0045211
"postsynaptic membrane" evidence=IEA] [GO:0005887 "integral to
plasma membrane" evidence=NAS] [GO:0006811 "ion transport"
evidence=IDA] [GO:0007218 "neuropeptide signaling pathway"
evidence=IDA] [GO:0016934 "extracellular-glycine-gated chloride
channel activity" evidence=IDA] [GO:0016594 "glycine binding"
evidence=IDA] [GO:0005886 "plasma membrane" evidence=TAS]
[GO:0034220 "ion transmembrane transport" evidence=TAS] [GO:0055085
"transmembrane transport" evidence=TAS] Reactome:REACT_15518
InterPro:IPR006028 InterPro:IPR006029 InterPro:IPR006201
InterPro:IPR006202 InterPro:IPR008127 InterPro:IPR008129
InterPro:IPR018000 Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252
PRINTS:PR00253 PRINTS:PR01673 PRINTS:PR01675 PROSITE:PS00236
EMBL:U77731 GO:GO:0005887 GO:GO:0030054 GO:GO:0045211
Gene3D:2.70.170.10 PANTHER:PTHR18945 SUPFAM:SSF90112
SUPFAM:SSF63712 TIGRFAMs:TIGR00860 GO:GO:0007218 EMBL:CH471074
GO:GO:0007416 GO:GO:0016934 DrugBank:DB00145 GO:GO:0034707
DrugBank:DB00898 HOVERGEN:HBG051707 eggNOG:NOG265706
HOGENOM:HOG000231336 GO:GO:0016594 GO:GO:0022824 TCDB:1.A.9.3.1
EMBL:X52008 EMBL:AF053495 EMBL:AF053487 EMBL:AF053488 EMBL:AF053489
EMBL:AF053490 EMBL:AF053491 EMBL:AF053492 EMBL:AF053493
EMBL:AF053494 EMBL:AY437083 EMBL:AY437084 EMBL:CR450343
EMBL:AK289561 EMBL:AK297304 EMBL:AK312591 EMBL:AC003658
EMBL:AC003683 EMBL:BC032864 EMBL:U77724 EMBL:U77725 EMBL:U77726
EMBL:U77727 EMBL:U77728 EMBL:U77729 EMBL:U77730 IPI:IPI00011566
IPI:IPI00220450 PIR:S12381 RefSeq:NP_001112357.1
RefSeq:NP_001112358.1 RefSeq:NP_001165413.1 RefSeq:NP_002054.1
UniGene:Hs.2700 ProteinModelPortal:P23416 SMR:P23416 IntAct:P23416
MINT:MINT-1412636 STRING:P23416 PhosphoSite:P23416 DMDM:121578
PRIDE:P23416 DNASU:2742 Ensembl:ENST00000218075
Ensembl:ENST00000355020 Ensembl:ENST00000443437 GeneID:2742
KEGG:hsa:2742 UCSC:uc004cwe.4 UCSC:uc010nep.3 CTD:2742
GeneCards:GC0XP014457 H-InvDB:HIX0016955 HGNC:HGNC:4327 MIM:305990
neXtProt:NX_P23416 PharmGKB:PA28728 InParanoid:P23416 KO:K05194
OMA:TTLFAFF OrthoDB:EOG4WWRJJ PhylomeDB:P23416 BindingDB:P23416
ChEMBL:CHEMBL5871 ChiTaRS:GLRA2 GenomeRNAi:2742 NextBio:10808
ArrayExpress:P23416 Bgee:P23416 CleanEx:HS_GLRA2
Genevestigator:P23416 GermOnline:ENSG00000101958 Uniprot:P23416
Length = 452
Score = 246 (91.7 bits), Expect = 1.7e-28, Sum P(2) = 1.7e-28
Identities = 44/103 (42%), Positives = 67/103 (65%)
Query: 100 YSSLTLTFILNRQYGFYLMDFYAPSILLVCISWVSFWMAPDAVPGRTILGASTMLTFFQL 159
++ + + F L RQ G+YL+ Y PS+L+V +SWVSFW+ DA P R LG +T+LT
Sbjct: 241 FTCIEVKFHLERQMGYYLIQMYIPSLLIVILSWVSFWINMDAAPARVALGITTVLTMTTQ 300
Query: 160 GIETGSSLPNVSYIRSNDVWFFACTVFIFLSLAEFAFVNTIWR 202
+ +SLP VSY+++ D+W C +F+F +L E+A VN + R
Sbjct: 301 SSGSRASLPKVSYVKAIDIWMAVCLLFVFAALLEYAAVNFVSR 343
Score = 97 (39.2 bits), Expect = 1.7e-28, Sum P(2) = 1.7e-28
Identities = 19/77 (24%), Positives = 40/77 (51%)
Query: 18 EFKVQLLLQLHWKDPRLEYRHYAPHITEMVGERNFIQNIWTPHIYLTNERDSLVLGLYRR 77
+++V + L+ W D RL Y Y ++ + + + +IW P ++ NE+ + +
Sbjct: 91 DYRVNIFLRQQWNDSRLAYSEYPDDSLDL--DPSMLDSIWKPDLFFANEKGANFHDVTTD 148
Query: 78 DMLVSILPDGDMLFSTR 94
+ L+ I +G +L+S R
Sbjct: 149 NKLLRISKNGKVLYSIR 165
>MGI|MGI:95748 [details] [associations]
symbol:Glra2 "glycine receptor, alpha 2 subunit" species:10090
"Mus musculus" [GO:0005216 "ion channel activity" evidence=IEA]
[GO:0005230 "extracellular ligand-gated ion channel activity"
evidence=IEA] [GO:0005254 "chloride channel activity" evidence=IEA]
[GO:0005886 "plasma membrane" evidence=IEA] [GO:0005887 "integral
to plasma membrane" evidence=IEA] [GO:0006810 "transport"
evidence=IEA] [GO:0006811 "ion transport" evidence=ISO] [GO:0006821
"chloride transport" evidence=IEA] [GO:0007218 "neuropeptide
signaling pathway" evidence=ISO] [GO:0016020 "membrane"
evidence=IEA] [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0016594 "glycine binding" evidence=ISO] [GO:0016934
"extracellular-glycine-gated chloride channel activity"
evidence=ISO] [GO:0022824 "transmitter-gated ion channel activity"
evidence=IEA] [GO:0030054 "cell junction" evidence=IEA] [GO:0034707
"chloride channel complex" evidence=IEA] [GO:0045202 "synapse"
evidence=IEA] [GO:0045211 "postsynaptic membrane" evidence=IEA]
InterPro:IPR006028 InterPro:IPR006029 InterPro:IPR006201
InterPro:IPR006202 InterPro:IPR008127 InterPro:IPR008129
InterPro:IPR018000 Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252
PRINTS:PR00253 PRINTS:PR01673 PRINTS:PR01675 PROSITE:PS00236
MGI:MGI:95748 GO:GO:0005887 GO:GO:0030054 GO:GO:0045211
Gene3D:2.70.170.10 PANTHER:PTHR18945 SUPFAM:SSF90112
SUPFAM:SSF63712 TIGRFAMs:TIGR00860 GO:GO:0007218 GO:GO:0007416
GO:GO:0016934 GO:GO:0034707 HOVERGEN:HBG051707 eggNOG:NOG265706
GeneTree:ENSGT00550000074453 HOGENOM:HOG000231336 GO:GO:0016594
GO:GO:0022824 CTD:2742 KO:K05194 OrthoDB:EOG4WWRJJ EMBL:BC056342
EMBL:BC068987 IPI:IPI00270265 RefSeq:NP_906272.1 UniGene:Mm.113877
ProteinModelPortal:Q7TNC8 SMR:Q7TNC8 STRING:Q7TNC8
PhosphoSite:Q7TNC8 PRIDE:Q7TNC8 Ensembl:ENSMUST00000058787
GeneID:237213 KEGG:mmu:237213 InParanoid:Q7TNC8 NextBio:383251
Bgee:Q7TNC8 CleanEx:MM_GLRA2 Genevestigator:Q7TNC8
GermOnline:ENSMUSG00000018589 Uniprot:Q7TNC8
Length = 452
Score = 246 (91.7 bits), Expect = 1.7e-28, Sum P(2) = 1.7e-28
Identities = 44/103 (42%), Positives = 67/103 (65%)
Query: 100 YSSLTLTFILNRQYGFYLMDFYAPSILLVCISWVSFWMAPDAVPGRTILGASTMLTFFQL 159
++ + + F L RQ G+YL+ Y PS+L+V +SWVSFW+ DA P R LG +T+LT
Sbjct: 241 FTCIEVKFHLERQMGYYLIQMYIPSLLIVILSWVSFWINMDAAPARVALGITTVLTMTTQ 300
Query: 160 GIETGSSLPNVSYIRSNDVWFFACTVFIFLSLAEFAFVNTIWR 202
+ +SLP VSY+++ D+W C +F+F +L E+A VN + R
Sbjct: 301 SSGSRASLPKVSYVKAIDIWMAVCLLFVFAALLEYAAVNFVSR 343
Score = 97 (39.2 bits), Expect = 1.7e-28, Sum P(2) = 1.7e-28
Identities = 19/77 (24%), Positives = 40/77 (51%)
Query: 18 EFKVQLLLQLHWKDPRLEYRHYAPHITEMVGERNFIQNIWTPHIYLTNERDSLVLGLYRR 77
+++V + L+ W D RL Y Y ++ + + + +IW P ++ NE+ + +
Sbjct: 91 DYRVNIFLRQQWNDSRLAYSEYPDDSLDL--DPSMLDSIWKPDLFFANEKGANFHDVTTD 148
Query: 78 DMLVSILPDGDMLFSTR 94
+ L+ I +G +L+S R
Sbjct: 149 NKLLRISKNGKVLYSIR 165
>RGD|2705 [details] [associations]
symbol:Glra2 "glycine receptor, alpha 2" species:10116 "Rattus
norvegicus" [GO:0005887 "integral to plasma membrane" evidence=IEA]
[GO:0006811 "ion transport" evidence=ISO] [GO:0007218 "neuropeptide
signaling pathway" evidence=IEA;ISO] [GO:0007416 "synapse assembly"
evidence=IEP] [GO:0016594 "glycine binding" evidence=IEA;ISO]
[GO:0016934 "extracellular-glycine-gated chloride channel activity"
evidence=IEA;ISO;TAS] [GO:0022824 "transmitter-gated ion channel
activity" evidence=IEA] [GO:0030054 "cell junction" evidence=IEA]
[GO:0034707 "chloride channel complex" evidence=IEA] [GO:0045211
"postsynaptic membrane" evidence=IEA] InterPro:IPR006028
InterPro:IPR006029 InterPro:IPR006201 InterPro:IPR006202
InterPro:IPR008127 InterPro:IPR008129 InterPro:IPR018000 Pfam:PF02931
Pfam:PF02932 PRINTS:PR00252 PRINTS:PR00253 PRINTS:PR01673
PRINTS:PR01675 PROSITE:PS00236 RGD:2705 GO:GO:0005887 GO:GO:0030054
GO:GO:0045211 Gene3D:2.70.170.10 PANTHER:PTHR18945 SUPFAM:SSF90112
SUPFAM:SSF63712 TIGRFAMs:TIGR00860 GO:GO:0007218 GO:GO:0007416
GO:GO:0016934 GO:GO:0034707 HOVERGEN:HBG051707 eggNOG:NOG265706
GeneTree:ENSGT00550000074453 HOGENOM:HOG000231336 GO:GO:0016594
GO:GO:0022824 CTD:2742 KO:K05194 OrthoDB:EOG4WWRJJ EMBL:X57281
EMBL:X61159 EMBL:AJ310837 IPI:IPI00210383 IPI:IPI00231543 PIR:S14816
PIR:S18836 RefSeq:NP_036700.1 RefSeq:XP_003752087.1 UniGene:Rn.10379
ProteinModelPortal:P22771 SMR:P22771 STRING:P22771
Ensembl:ENSRNOT00000004443 GeneID:100910572 GeneID:24397
KEGG:rno:100910572 KEGG:rno:24397 UCSC:RGD:2705 InParanoid:P22771
BindingDB:P22771 ChEMBL:CHEMBL2328 NextBio:603187 ArrayExpress:P22771
Genevestigator:P22771 GermOnline:ENSRNOG00000003313 Uniprot:P22771
Length = 452
Score = 246 (91.7 bits), Expect = 1.7e-28, Sum P(2) = 1.7e-28
Identities = 44/103 (42%), Positives = 67/103 (65%)
Query: 100 YSSLTLTFILNRQYGFYLMDFYAPSILLVCISWVSFWMAPDAVPGRTILGASTMLTFFQL 159
++ + + F L RQ G+YL+ Y PS+L+V +SWVSFW+ DA P R LG +T+LT
Sbjct: 241 FTCIEVKFHLERQMGYYLIQMYIPSLLIVILSWVSFWINMDAAPARVALGITTVLTMTTQ 300
Query: 160 GIETGSSLPNVSYIRSNDVWFFACTVFIFLSLAEFAFVNTIWR 202
+ +SLP VSY+++ D+W C +F+F +L E+A VN + R
Sbjct: 301 SSGSRASLPKVSYVKAIDIWMAVCLLFVFAALLEYAAVNFVSR 343
Score = 97 (39.2 bits), Expect = 1.7e-28, Sum P(2) = 1.7e-28
Identities = 19/77 (24%), Positives = 40/77 (51%)
Query: 18 EFKVQLLLQLHWKDPRLEYRHYAPHITEMVGERNFIQNIWTPHIYLTNERDSLVLGLYRR 77
+++V + L+ W D RL Y Y ++ + + + +IW P ++ NE+ + +
Sbjct: 91 DYRVNIFLRQQWNDSRLAYSEYPDDSLDL--DPSMLDSIWKPDLFFANEKGANFHDVTTD 148
Query: 78 DMLVSILPDGDMLFSTR 94
+ L+ I +G +L+S R
Sbjct: 149 NKLLRISKNGKVLYSIR 165
>UNIPROTKB|P22771 [details] [associations]
symbol:Glra2 "Glycine receptor subunit alpha-2"
species:10116 "Rattus norvegicus" [GO:0005887 "integral to plasma
membrane" evidence=IEA] [GO:0016594 "glycine binding" evidence=IEA]
[GO:0022824 "transmitter-gated ion channel activity" evidence=IEA]
[GO:0030054 "cell junction" evidence=IEA] InterPro:IPR006028
InterPro:IPR006029 InterPro:IPR006201 InterPro:IPR006202
InterPro:IPR008127 InterPro:IPR008129 InterPro:IPR018000
Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252 PRINTS:PR00253
PRINTS:PR01673 PRINTS:PR01675 PROSITE:PS00236 RGD:2705
GO:GO:0005887 GO:GO:0030054 GO:GO:0045211 Gene3D:2.70.170.10
PANTHER:PTHR18945 SUPFAM:SSF90112 SUPFAM:SSF63712
TIGRFAMs:TIGR00860 GO:GO:0007218 GO:GO:0007416 GO:GO:0016934
GO:GO:0034707 HOVERGEN:HBG051707 eggNOG:NOG265706
GeneTree:ENSGT00550000074453 HOGENOM:HOG000231336 GO:GO:0016594
GO:GO:0022824 CTD:2742 KO:K05194 OrthoDB:EOG4WWRJJ EMBL:X57281
EMBL:X61159 EMBL:AJ310837 IPI:IPI00210383 IPI:IPI00231543
PIR:S14816 PIR:S18836 RefSeq:NP_036700.1 RefSeq:XP_003752087.1
UniGene:Rn.10379 ProteinModelPortal:P22771 SMR:P22771 STRING:P22771
Ensembl:ENSRNOT00000004443 GeneID:100910572 GeneID:24397
KEGG:rno:100910572 KEGG:rno:24397 UCSC:RGD:2705 InParanoid:P22771
BindingDB:P22771 ChEMBL:CHEMBL2328 NextBio:603187
ArrayExpress:P22771 Genevestigator:P22771
GermOnline:ENSRNOG00000003313 Uniprot:P22771
Length = 452
Score = 246 (91.7 bits), Expect = 1.7e-28, Sum P(2) = 1.7e-28
Identities = 44/103 (42%), Positives = 67/103 (65%)
Query: 100 YSSLTLTFILNRQYGFYLMDFYAPSILLVCISWVSFWMAPDAVPGRTILGASTMLTFFQL 159
++ + + F L RQ G+YL+ Y PS+L+V +SWVSFW+ DA P R LG +T+LT
Sbjct: 241 FTCIEVKFHLERQMGYYLIQMYIPSLLIVILSWVSFWINMDAAPARVALGITTVLTMTTQ 300
Query: 160 GIETGSSLPNVSYIRSNDVWFFACTVFIFLSLAEFAFVNTIWR 202
+ +SLP VSY+++ D+W C +F+F +L E+A VN + R
Sbjct: 301 SSGSRASLPKVSYVKAIDIWMAVCLLFVFAALLEYAAVNFVSR 343
Score = 97 (39.2 bits), Expect = 1.7e-28, Sum P(2) = 1.7e-28
Identities = 19/77 (24%), Positives = 40/77 (51%)
Query: 18 EFKVQLLLQLHWKDPRLEYRHYAPHITEMVGERNFIQNIWTPHIYLTNERDSLVLGLYRR 77
+++V + L+ W D RL Y Y ++ + + + +IW P ++ NE+ + +
Sbjct: 91 DYRVNIFLRQQWNDSRLAYSEYPDDSLDL--DPSMLDSIWKPDLFFANEKGANFHDVTTD 148
Query: 78 DMLVSILPDGDMLFSTR 94
+ L+ I +G +L+S R
Sbjct: 149 NKLLRISKNGKVLYSIR 165
>RGD|61901 [details] [associations]
symbol:Gabrd "gamma-aminobutyric acid (GABA) A receptor, delta"
species:10116 "Rattus norvegicus" [GO:0004890 "GABA-A receptor
activity" evidence=IDA] [GO:0005230 "extracellular ligand-gated ion
channel activity" evidence=IEA] [GO:0005254 "chloride channel
activity" evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0007268 "synaptic transmission" evidence=IDA] [GO:0030054 "cell
junction" evidence=IEA] [GO:0034707 "chloride channel complex"
evidence=IEA] [GO:0045211 "postsynaptic membrane" evidence=IEA]
InterPro:IPR006028 InterPro:IPR006029 InterPro:IPR006201
InterPro:IPR006202 InterPro:IPR008098 InterPro:IPR018000
Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252 PRINTS:PR00253
PRINTS:PR01722 PROSITE:PS00236 RGD:61901 GO:GO:0005886 GO:GO:0007268
GO:GO:0030054 GO:GO:0045211 GO:GO:0005230 GO:GO:0004890
Gene3D:2.70.170.10 PANTHER:PTHR18945 SUPFAM:SSF90112 SUPFAM:SSF63712
TIGRFAMs:TIGR00860 GO:GO:0034707 GO:GO:0005254 HOVERGEN:HBG051707
HOGENOM:HOG000231335 CTD:2563 eggNOG:NOG308574 KO:K05184 OMA:EYTMTVF
OrthoDB:EOG4H9XKN EMBL:L08496 EMBL:BC087714 EMBL:M35162
IPI:IPI00192644 PIR:A34625 RefSeq:NP_058985.1 UniGene:Rn.10927
ProteinModelPortal:P18506 STRING:P18506 Ensembl:ENSRNOT00000022246
GeneID:29689 KEGG:rno:29689 GeneTree:ENSGT00630000089571
InParanoid:P18506 BindingDB:P18506 ChEMBL:CHEMBL337 NextBio:610071
ArrayExpress:P18506 Genevestigator:P18506
GermOnline:ENSRNOG00000016385 Uniprot:P18506
Length = 449
Score = 238 (88.8 bits), Expect = 1.9e-28, Sum P(2) = 1.9e-28
Identities = 47/102 (46%), Positives = 66/102 (64%)
Query: 97 AYMYSSLTLTFILNRQYGFYLMDFYAPSILLVCISWVSFWMAPDAVPGRTILGASTMLTF 156
A + L+L F L R G Y++ Y PS+LLV +SWVSFW++ AVP R LG +T+LT
Sbjct: 231 AGQFPRLSLHFQLRRNRGVYIIQSYMPSVLLVAMSWVSFWISQAAVPARVSLGITTVLTM 290
Query: 157 FQLGIETGSSLPNVSYIRSNDVWFFACTVFIFLSLAEFAFVN 198
L + SSLP S I++ DV+F+ C VF+F +L E+AF +
Sbjct: 291 TTLMVSARSSLPRASAIKALDVYFWICYVFVFAALVEYAFAH 332
Score = 105 (42.0 bits), Expect = 1.9e-28, Sum P(2) = 1.9e-28
Identities = 23/91 (25%), Positives = 45/91 (49%)
Query: 6 KLVDIGNLS-FQQEFKVQLLLQLHWKDPRLEYRHYAPHITEMVG-ERNFIQNIWTPHIYL 63
++ I ++S E+ + + L W+D RL Y H E +G + F+ +W P ++
Sbjct: 71 EVASIDHISEANMEYTMTVFLHQSWRDSRLSYNH----TNETLGLDSRFVDKLWLPDTFI 126
Query: 64 TNERDSLVLGLYRRDMLVSILPDGDMLFSTR 94
N + + + + L+ + PDG +L+S R
Sbjct: 127 VNAKSAWFHDVTVENKLIRLQPDGVILYSIR 157
>UNIPROTKB|O14764 [details] [associations]
symbol:GABRD "Gamma-aminobutyric acid receptor subunit
delta" species:9606 "Homo sapiens" [GO:0005230 "extracellular
ligand-gated ion channel activity" evidence=IEA] [GO:0005254
"chloride channel activity" evidence=IEA] [GO:0030054 "cell
junction" evidence=IEA] [GO:0034707 "chloride channel complex"
evidence=IEA] [GO:0004890 "GABA-A receptor activity" evidence=IEA]
[GO:0007268 "synaptic transmission" evidence=IEA] [GO:0045211
"postsynaptic membrane" evidence=IEA] [GO:0005887 "integral to
plasma membrane" evidence=TAS] [GO:0006810 "transport"
evidence=TAS] [GO:0007165 "signal transduction" evidence=TAS]
InterPro:IPR006028 InterPro:IPR006029 InterPro:IPR006201
InterPro:IPR006202 InterPro:IPR008098 InterPro:IPR018000
Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252 PRINTS:PR00253
PRINTS:PR01722 PROSITE:PS00236 GO:GO:0005887 GO:GO:0007268
GO:GO:0030054 GO:GO:0045211 GO:GO:0005230 GO:GO:0004890
Gene3D:2.70.170.10 PANTHER:PTHR18945 SUPFAM:SSF90112
SUPFAM:SSF63712 TIGRFAMs:TIGR00860 GO:GO:0006810 GO:GO:0034707
GO:GO:0005254 Orphanet:307 HOVERGEN:HBG051707 HOGENOM:HOG000231335
EMBL:AF016917 EMBL:AL391845 EMBL:BC033801 IPI:IPI00375475
RefSeq:NP_000806.2 UniGene:Hs.113882 ProteinModelPortal:O14764
SMR:O14764 IntAct:O14764 MINT:MINT-1461496 STRING:O14764
PhosphoSite:O14764 PRIDE:O14764 DNASU:2563 Ensembl:ENST00000378585
GeneID:2563 KEGG:hsa:2563 UCSC:uc001aip.2 CTD:2563
GeneCards:GC01P001950 HGNC:HGNC:4084 MIM:137163 MIM:613060
neXtProt:NX_O14764 Orphanet:36387 Orphanet:1606 PharmGKB:PA28498
eggNOG:NOG308574 InParanoid:O14764 KO:K05184 OMA:EYTMTVF
OrthoDB:EOG4H9XKN PhylomeDB:O14764 BindingDB:O14764
ChEMBL:CHEMBL3591 GenomeRNAi:2563 NextBio:10127 Bgee:O14764
CleanEx:HS_GABRD Genevestigator:O14764 GermOnline:ENSG00000187730
Uniprot:O14764
Length = 452
Score = 238 (88.8 bits), Expect = 2.0e-28, Sum P(2) = 2.0e-28
Identities = 47/102 (46%), Positives = 66/102 (64%)
Query: 97 AYMYSSLTLTFILNRQYGFYLMDFYAPSILLVCISWVSFWMAPDAVPGRTILGASTMLTF 156
A + L+L F L R G Y++ Y PS+LLV +SWVSFW++ AVP R LG +T+LT
Sbjct: 231 AGQFPRLSLHFHLRRNRGVYIIQSYMPSVLLVAMSWVSFWISQAAVPARVSLGITTVLTM 290
Query: 157 FQLGIETGSSLPNVSYIRSNDVWFFACTVFIFLSLAEFAFVN 198
L + SSLP S I++ DV+F+ C VF+F +L E+AF +
Sbjct: 291 TTLMVSARSSLPRASAIKALDVYFWICYVFVFAALVEYAFAH 332
Score = 105 (42.0 bits), Expect = 2.0e-28, Sum P(2) = 2.0e-28
Identities = 23/91 (25%), Positives = 45/91 (49%)
Query: 6 KLVDIGNLS-FQQEFKVQLLLQLHWKDPRLEYRHYAPHITEMVG-ERNFIQNIWTPHIYL 63
++ I ++S E+ + + L W+D RL Y H E +G + F+ +W P ++
Sbjct: 71 EVASIDHISEANMEYTMTVFLHQSWRDSRLSYNH----TNETLGLDSRFVDKLWLPDTFI 126
Query: 64 TNERDSLVLGLYRRDMLVSILPDGDMLFSTR 94
N + + + + L+ + PDG +L+S R
Sbjct: 127 VNAKSAWFHDVTVENKLIRLQPDGVILYSIR 157
>ZFIN|ZDB-GENE-020402-2 [details] [associations]
symbol:glra4b "glycine receptor, alpha 4b"
species:7955 "Danio rerio" [GO:0045211 "postsynaptic membrane"
evidence=IEA] [GO:0005887 "integral to plasma membrane"
evidence=IEA] [GO:0006811 "ion transport" evidence=IEA] [GO:0016020
"membrane" evidence=IEA] [GO:0016021 "integral to membrane"
evidence=IEA] [GO:0016594 "glycine binding" evidence=IEA]
[GO:0005230 "extracellular ligand-gated ion channel activity"
evidence=IEA] [GO:0006810 "transport" evidence=IEA] [GO:0022824
"transmitter-gated ion channel activity" evidence=IEA] [GO:0030054
"cell junction" evidence=IEA] [GO:0005886 "plasma membrane"
evidence=IEA] [GO:0045202 "synapse" evidence=IEA]
InterPro:IPR006028 InterPro:IPR006029 InterPro:IPR006201
InterPro:IPR006202 InterPro:IPR008127 InterPro:IPR018000
Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252 PRINTS:PR00253
PRINTS:PR01673 PROSITE:PS00236 ZFIN:ZDB-GENE-020402-2 GO:GO:0005887
GO:GO:0030054 GO:GO:0045211 GO:GO:0005230 Gene3D:2.70.170.10
PANTHER:PTHR18945 SUPFAM:SSF90112 SUPFAM:SSF63712
TIGRFAMs:TIGR00860 GeneTree:ENSGT00550000074453 GO:GO:0016594
GO:GO:0022824 EMBL:BX470076 IPI:IPI00998123
ProteinModelPortal:F1QTT1 Ensembl:ENSDART00000006474
ArrayExpress:F1QTT1 Uniprot:F1QTT1
Length = 537
Score = 240 (89.5 bits), Expect = 2.0e-28, Sum P(2) = 2.0e-28
Identities = 44/103 (42%), Positives = 66/103 (64%)
Query: 100 YSSLTLTFILNRQYGFYLMDFYAPSILLVCISWVSFWMAPDAVPGRTILGASTMLTFFQL 159
++ + + F L RQ G+YL+ Y PS+L V +SWVSFW+ DA P R LG +T+LT
Sbjct: 285 FTCIEVKFHLERQMGYYLIQMYIPSLLTVILSWVSFWINMDAAPARVGLGITTVLTMTTQ 344
Query: 160 GIETGSSLPNVSYIRSNDVWFFACTVFIFLSLAEFAFVNTIWR 202
+ +SLP VSY+++ D+W C +F+F +L E+A VN + R
Sbjct: 345 SSGSRASLPKVSYVKAIDIWMAVCLLFVFAALLEYAAVNFVSR 387
Score = 107 (42.7 bits), Expect = 2.0e-28, Sum P(2) = 2.0e-28
Identities = 19/77 (24%), Positives = 43/77 (55%)
Query: 18 EFKVQLLLQLHWKDPRLEYRHYAPHITEMVGERNFIQNIWTPHIYLTNERDSLVLGLYRR 77
++++ + L+ W DPRL Y+ Y ++ + + + +IW P ++ NE+ + +
Sbjct: 135 DYRLNVFLRQQWNDPRLAYKEYPDDSLDL--DPSMLDSIWKPDLFFANEKGANFHEVTTD 192
Query: 78 DMLVSILPDGDMLFSTR 94
+ L+ I +G++L+S R
Sbjct: 193 NKLLRIFQNGNVLYSIR 209
>UNIPROTKB|E1BTB5 [details] [associations]
symbol:GLRA2 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0005887 "integral to plasma membrane" evidence=IEA]
[GO:0016594 "glycine binding" evidence=IEA] [GO:0016934
"extracellular-glycine-gated chloride channel activity"
evidence=IEA] [GO:0022824 "transmitter-gated ion channel activity"
evidence=IEA] [GO:0030054 "cell junction" evidence=IEA] [GO:0045211
"postsynaptic membrane" evidence=IEA] [GO:0007218 "neuropeptide
signaling pathway" evidence=IEA] InterPro:IPR006028
InterPro:IPR006029 InterPro:IPR006201 InterPro:IPR006202
InterPro:IPR008127 InterPro:IPR008129 InterPro:IPR018000
Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252 PRINTS:PR00253
PRINTS:PR01673 PRINTS:PR01675 PROSITE:PS00236 GO:GO:0005887
GO:GO:0030054 GO:GO:0045211 Gene3D:2.70.170.10 PANTHER:PTHR18945
SUPFAM:SSF90112 SUPFAM:SSF63712 TIGRFAMs:TIGR00860 GO:GO:0007218
GO:GO:0016934 GeneTree:ENSGT00550000074453 GO:GO:0016594
GO:GO:0022824 CTD:2742 KO:K05194 OMA:TTLFAFF EMBL:AADN02011338
EMBL:AADN02011339 EMBL:AADN02011340 EMBL:AADN02011341
IPI:IPI00575771 RefSeq:XP_003640566.1 Ensembl:ENSGALT00000026747
GeneID:772019 KEGG:gga:772019 Uniprot:E1BTB5
Length = 452
Score = 246 (91.7 bits), Expect = 2.8e-28, Sum P(2) = 2.8e-28
Identities = 44/103 (42%), Positives = 67/103 (65%)
Query: 100 YSSLTLTFILNRQYGFYLMDFYAPSILLVCISWVSFWMAPDAVPGRTILGASTMLTFFQL 159
++ + + F L RQ G+YL+ Y PS+L+V +SWVSFW+ DA P R LG +T+LT
Sbjct: 241 FTCIEVKFHLERQMGYYLIQMYIPSLLIVILSWVSFWINMDAAPARVALGITTVLTMTTQ 300
Query: 160 GIETGSSLPNVSYIRSNDVWFFACTVFIFLSLAEFAFVNTIWR 202
+ +SLP VSY+++ D+W C +F+F +L E+A VN + R
Sbjct: 301 SSGSRASLPKVSYVKAIDIWMAVCLLFVFAALLEYAAVNFVSR 343
Score = 95 (38.5 bits), Expect = 2.8e-28, Sum P(2) = 2.8e-28
Identities = 19/77 (24%), Positives = 39/77 (50%)
Query: 18 EFKVQLLLQLHWKDPRLEYRHYAPHITEMVGERNFIQNIWTPHIYLTNERDSLVLGLYRR 77
+++V + L+ W D RL Y Y ++ + + + +IW P ++ NE+ + +
Sbjct: 91 DYRVNIFLRQQWNDSRLAYSEYPDDSLDL--DPSMLDSIWKPDLFFANEKGANFHDVTTD 148
Query: 78 DMLVSILPDGDMLFSTR 94
+ L+ I G +L+S R
Sbjct: 149 NKLLRISKTGKVLYSIR 165
>UNIPROTKB|J9P3X1 [details] [associations]
symbol:GABRB3 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0045211 "postsynaptic membrane" evidence=IEA]
[GO:0030054 "cell junction" evidence=IEA] [GO:0016021 "integral to
membrane" evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0005230 "extracellular ligand-gated ion channel activity"
evidence=IEA] [GO:0004890 "GABA-A receptor activity" evidence=IEA]
InterPro:IPR002289 InterPro:IPR006028 InterPro:IPR006029
InterPro:IPR006201 InterPro:IPR006202 InterPro:IPR018000
Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252 PRINTS:PR00253
PRINTS:PR01160 PROSITE:PS00236 GO:GO:0016021 GO:GO:0005886
GO:GO:0030054 GO:GO:0045211 GO:GO:0005230 GO:GO:0004890
Gene3D:2.70.170.10 PANTHER:PTHR18945 SUPFAM:SSF90112
SUPFAM:SSF63712 TIGRFAMs:TIGR00860 GeneTree:ENSGT00630000089685
OMA:FYAIYET EMBL:AAEX03002176 EMBL:AAEX03002177 EMBL:AAEX03002178
Ensembl:ENSCAFT00000043201 Uniprot:J9P3X1
Length = 409
Score = 233 (87.1 bits), Expect = 4.5e-28, Sum P(2) = 4.5e-28
Identities = 42/102 (41%), Positives = 65/102 (63%)
Query: 100 YSSLTLTFILNRQYGFYLMDFYAPSILLVCISWVSFWMAPDAVPGRTILGASTMLTFFQL 159
Y L+L+F L R G++++ Y PSIL+ +SWVSFW+ DA R LG +T+LT +
Sbjct: 166 YPRLSLSFRLKRNIGYFILQTYMPSILITILSWVSFWINYDASAARVALGITTVLTMTTI 225
Query: 160 GIETGSSLPNVSYIRSNDVWFFACTVFIFLSLAEFAFVNTIW 201
+LP + Y+++ D++ C VF+FL+L E+AFVN I+
Sbjct: 226 NTHLRETLPKIPYVKAIDMYLMGCFVFVFLALLEYAFVNYIF 267
Score = 104 (41.7 bits), Expect = 4.5e-28, Sum P(2) = 4.5e-28
Identities = 22/91 (24%), Positives = 44/91 (48%)
Query: 8 VDIGNLSFQQE----FKVQLLLQLHWKDPRLEYRHYAPHITEMVGERNFIQNIWTPHIYL 63
+DI ++ E + + + Q +W+D RL Y ++T + +W P Y
Sbjct: 3 IDIASIDMVSEVNMDYTLTMYFQQYWRDKRLAYSGIPLNLTL---DNRVADQLWVPDTYF 59
Query: 64 TNERDSLVLGLYRRDMLVSILPDGDMLFSTR 94
N++ S V G+ ++ ++ + PDG +L+ R
Sbjct: 60 LNDKKSFVHGVTVKNRMIRLHPDGTVLYGLR 90
>UNIPROTKB|F1MAU5 [details] [associations]
symbol:GABRB3 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0090102 "cochlea development" evidence=IEA] [GO:0060384
"innervation" evidence=IEA] [GO:0060119 "inner ear receptor cell
development" evidence=IEA] [GO:0007605 "sensory perception of
sound" evidence=IEA] [GO:0045211 "postsynaptic membrane"
evidence=IEA] [GO:0030054 "cell junction" evidence=IEA] [GO:0016021
"integral to membrane" evidence=IEA] [GO:0005886 "plasma membrane"
evidence=IEA] [GO:0005230 "extracellular ligand-gated ion channel
activity" evidence=IEA] [GO:0004890 "GABA-A receptor activity"
evidence=IEA] InterPro:IPR002289 InterPro:IPR006028
InterPro:IPR006029 InterPro:IPR006201 InterPro:IPR006202
InterPro:IPR018000 Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252
PRINTS:PR00253 PRINTS:PR01160 PROSITE:PS00236 GO:GO:0016021
GO:GO:0005886 GO:GO:0030054 GO:GO:0045211 GO:GO:0005230
GO:GO:0004890 Gene3D:2.70.170.10 PANTHER:PTHR18945 SUPFAM:SSF90112
SUPFAM:SSF63712 TIGRFAMs:TIGR00860 GeneTree:ENSGT00630000089685
OMA:FYAIYET EMBL:DAAA02051680 EMBL:DAAA02051681 EMBL:DAAA02051682
IPI:IPI00695874 Ensembl:ENSBTAT00000017858 ArrayExpress:F1MAU5
Uniprot:F1MAU5
Length = 392
Score = 233 (87.1 bits), Expect = 4.9e-28, Sum P(2) = 4.9e-28
Identities = 42/102 (41%), Positives = 65/102 (63%)
Query: 100 YSSLTLTFILNRQYGFYLMDFYAPSILLVCISWVSFWMAPDAVPGRTILGASTMLTFFQL 159
Y L+L+F L R G++++ Y PSIL+ +SWVSFW+ DA R LG +T+LT +
Sbjct: 150 YPRLSLSFRLKRNIGYFILQTYMPSILITILSWVSFWINYDASAARVALGITTVLTMTTI 209
Query: 160 GIETGSSLPNVSYIRSNDVWFFACTVFIFLSLAEFAFVNTIW 201
+LP + Y+++ D++ C VF+FL+L E+AFVN I+
Sbjct: 210 NTHLRETLPKIPYVKAIDMYLMGCFVFVFLALLEYAFVNYIF 251
Score = 102 (41.0 bits), Expect = 4.9e-28, Sum P(2) = 4.9e-28
Identities = 19/77 (24%), Positives = 39/77 (50%)
Query: 18 EFKVQLLLQLHWKDPRLEYRHYAPHITEMVGERNFIQNIWTPHIYLTNERDSLVLGLYRR 77
++ + + Q +W+D RL Y ++T + +W P Y N++ S V G+ +
Sbjct: 1 DYTLTMYFQQYWRDKRLAYSGIPLNLTL---DNRVADQLWVPDTYFLNDKKSFVHGVTVK 57
Query: 78 DMLVSILPDGDMLFSTR 94
+ ++ + PDG +L+ R
Sbjct: 58 NRMIRLHPDGTVLYGLR 74
>UNIPROTKB|E1BW41 [details] [associations]
symbol:LOC100858201 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0004890 "GABA-A receptor activity"
evidence=IEA] [GO:0005230 "extracellular ligand-gated ion channel
activity" evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0016021 "integral to membrane" evidence=IEA] [GO:0030054 "cell
junction" evidence=IEA] [GO:0045211 "postsynaptic membrane"
evidence=IEA] InterPro:IPR002289 InterPro:IPR006028
InterPro:IPR006029 InterPro:IPR006201 InterPro:IPR006202
InterPro:IPR018000 Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252
PRINTS:PR00253 PRINTS:PR01160 PROSITE:PS00236 GO:GO:0016021
GO:GO:0005886 GO:GO:0030054 GO:GO:0045211 GO:GO:0005230
GO:GO:0004890 Gene3D:2.70.170.10 PANTHER:PTHR18945 SUPFAM:SSF90112
SUPFAM:SSF63712 TIGRFAMs:TIGR00860 GeneTree:ENSGT00630000089685
EMBL:AADN02017665 EMBL:AADN02017666 EMBL:AADN02017667
EMBL:AADN02017668 EMBL:AC145944 IPI:IPI00589447
Ensembl:ENSGALT00000027028 ArrayExpress:E1BW41 Uniprot:E1BW41
Length = 397
Score = 233 (87.1 bits), Expect = 5.6e-28, Sum P(2) = 5.6e-28
Identities = 42/102 (41%), Positives = 65/102 (63%)
Query: 100 YSSLTLTFILNRQYGFYLMDFYAPSILLVCISWVSFWMAPDAVPGRTILGASTMLTFFQL 159
Y L+L+F L R G++++ Y PSIL+ +SWVSFW+ DA R LG +T+LT +
Sbjct: 151 YPRLSLSFRLKRNIGYFILQTYMPSILITILSWVSFWINYDASAARVALGITTVLTMTTI 210
Query: 160 GIETGSSLPNVSYIRSNDVWFFACTVFIFLSLAEFAFVNTIW 201
+LP + Y+++ D++ C VF+FL+L E+AFVN I+
Sbjct: 211 NTHLRETLPKIPYVKAIDMYLMGCFVFVFLALLEYAFVNYIF 252
Score = 102 (41.0 bits), Expect = 5.6e-28, Sum P(2) = 5.6e-28
Identities = 19/77 (24%), Positives = 39/77 (50%)
Query: 18 EFKVQLLLQLHWKDPRLEYRHYAPHITEMVGERNFIQNIWTPHIYLTNERDSLVLGLYRR 77
++ + + Q +W+D RL Y ++T + +W P Y N++ S V G+ +
Sbjct: 2 DYTLTMYFQQYWRDKRLAYAGIPLNLTL---DNRVADQLWVPDTYFLNDKKSFVHGVTVK 58
Query: 78 DMLVSILPDGDMLFSTR 94
+ ++ + PDG +L+ R
Sbjct: 59 NRMIRLHPDGTVLYGLR 75
>ZFIN|ZDB-GENE-030131-8196 [details] [associations]
symbol:gabrb2 "gamma-aminobutyric acid (GABA) A
receptor, beta 2" species:7955 "Danio rerio" [GO:0004890 "GABA-A
receptor activity" evidence=IEA] [GO:0005230 "extracellular
ligand-gated ion channel activity" evidence=IEA] [GO:0006811 "ion
transport" evidence=IEA] [GO:0016020 "membrane" evidence=IEA]
[GO:0016021 "integral to membrane" evidence=IEA] [GO:0005216 "ion
channel activity" evidence=IEA] [GO:0006810 "transport"
evidence=IEA] [GO:0045211 "postsynaptic membrane" evidence=IEA]
[GO:0030054 "cell junction" evidence=IEA] [GO:0005886 "plasma
membrane" evidence=IEA] [GO:0045202 "synapse" evidence=IEA]
InterPro:IPR002289 InterPro:IPR006028 InterPro:IPR006029
InterPro:IPR006201 InterPro:IPR006202 InterPro:IPR018000
Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252 PRINTS:PR00253
PRINTS:PR01160 PROSITE:PS00236 ZFIN:ZDB-GENE-030131-8196
GO:GO:0016021 GO:GO:0005886 GO:GO:0030054 GO:GO:0045211
GO:GO:0005230 GO:GO:0004890 Gene3D:2.70.170.10 PANTHER:PTHR18945
SUPFAM:SSF90112 SUPFAM:SSF63712 TIGRFAMs:TIGR00860
HOVERGEN:HBG051707 KO:K05181 CTD:2561 HSSP:P23415 EMBL:AJ302649
IPI:IPI00852026 RefSeq:NP_001019558.2 UniGene:Dr.132858
ProteinModelPortal:Q9DDD9 SMR:Q9DDD9 GeneID:336252 KEGG:dre:336252
InParanoid:Q9DDD9 NextBio:20811647 Uniprot:Q9DDD9
Length = 519
Score = 238 (88.8 bits), Expect = 5.9e-28, Sum P(2) = 5.9e-28
Identities = 46/114 (40%), Positives = 72/114 (63%)
Query: 88 DMLFSTRSRAYMYSSLTLTFILNRQYGFYLMDFYAPSILLVCISWVSFWMAPDAVPGRTI 147
+++FST S Y L+L+F L R G++++ Y PSIL+ +SWVSFW+ DA R
Sbjct: 220 NVVFSTGS----YPRLSLSFKLKRNIGYFILQTYMPSILITILSWVSFWINYDASAARVA 275
Query: 148 LGASTMLTFFQLGIETGSSLPNVSYIRSNDVWFFACTVFIFLSLAEFAFVNTIW 201
LG +T+LT + +LP + Y+++ D++ C VF+FL+L E+AFVN I+
Sbjct: 276 LGITTVLTMTTINTHLRETLPKIPYVKAIDMYLMGCFVFVFLALLEYAFVNYIF 329
Score = 104 (41.7 bits), Expect = 5.9e-28, Sum P(2) = 5.9e-28
Identities = 22/91 (24%), Positives = 43/91 (47%)
Query: 8 VDIGNLSFQQEFKVQLLLQLH----WKDPRLEYRHYAPHITEMVGERNFIQNIWTPHIYL 63
+DI ++ E + L ++ W+D RL Y ++T + +W P Y
Sbjct: 65 IDIASIDMVSEVNMDYTLTMYFQQAWRDKRLSYSEIPLNLTL---DNRVADQLWVPDTYF 121
Query: 64 TNERDSLVLGLYRRDMLVSILPDGDMLFSTR 94
N++ S V G+ ++ ++ + PDG +L+ R
Sbjct: 122 LNDKKSFVHGVTVKNRMIRLHPDGTVLYGLR 152
>UNIPROTKB|F1LRQ0 [details] [associations]
symbol:Gabrb3 "Gamma-aminobutyric acid receptor subunit
beta-3" species:10116 "Rattus norvegicus" [GO:0004890 "GABA-A
receptor activity" evidence=IEA] [GO:0005230 "extracellular
ligand-gated ion channel activity" evidence=IEA] [GO:0005886
"plasma membrane" evidence=IEA] [GO:0016021 "integral to membrane"
evidence=IEA] [GO:0030054 "cell junction" evidence=IEA] [GO:0045211
"postsynaptic membrane" evidence=IEA] InterPro:IPR002289
InterPro:IPR006028 InterPro:IPR006029 InterPro:IPR006201
InterPro:IPR006202 InterPro:IPR018000 Pfam:PF02931 Pfam:PF02932
PRINTS:PR00252 PRINTS:PR00253 PRINTS:PR01160 PROSITE:PS00236
RGD:2651 GO:GO:0016021 GO:GO:0005886 GO:GO:0030054 GO:GO:0045211
GO:GO:0005230 GO:GO:0004890 Gene3D:2.70.170.10 PANTHER:PTHR18945
SUPFAM:SSF90112 SUPFAM:SSF63712 TIGRFAMs:TIGR00860
GeneTree:ENSGT00630000089685 IPI:IPI00950928
Ensembl:ENSRNOT00000065223 ArrayExpress:F1LRQ0 Uniprot:F1LRQ0
Length = 402
Score = 233 (87.1 bits), Expect = 6.3e-28, Sum P(2) = 6.3e-28
Identities = 42/102 (41%), Positives = 65/102 (63%)
Query: 100 YSSLTLTFILNRQYGFYLMDFYAPSILLVCISWVSFWMAPDAVPGRTILGASTMLTFFQL 159
Y L+L+F L R G++++ Y PSIL+ +SWVSFW+ DA R LG +T+LT +
Sbjct: 159 YPRLSLSFRLKRNIGYFILQTYMPSILITILSWVSFWINYDASAARVALGITTVLTMTTI 218
Query: 160 GIETGSSLPNVSYIRSNDVWFFACTVFIFLSLAEFAFVNTIW 201
+LP + Y+++ D++ C VF+FL+L E+AFVN I+
Sbjct: 219 NTHLRETLPKIPYVKAIDMYLMGCFVFVFLALLEYAFVNYIF 260
Score = 102 (41.0 bits), Expect = 6.3e-28, Sum P(2) = 6.3e-28
Identities = 19/77 (24%), Positives = 39/77 (50%)
Query: 18 EFKVQLLLQLHWKDPRLEYRHYAPHITEMVGERNFIQNIWTPHIYLTNERDSLVLGLYRR 77
++ + + Q +W+D RL Y ++T + +W P Y N++ S V G+ +
Sbjct: 10 DYTLTMYFQQYWRDKRLAYSGIPLNLTL---DNRVADQLWVPDTYFLNDKKSFVHGVTVK 66
Query: 78 DMLVSILPDGDMLFSTR 94
+ ++ + PDG +L+ R
Sbjct: 67 NRMIRLHPDGTVLYGLR 83
>UNIPROTKB|F5GXV5 [details] [associations]
symbol:GABRB1 "Gamma-aminobutyric acid receptor subunit
beta-1" species:9606 "Homo sapiens" [GO:0004890 "GABA-A receptor
activity" evidence=IEA] [GO:0005230 "extracellular ligand-gated ion
channel activity" evidence=IEA] [GO:0005886 "plasma membrane"
evidence=IEA] [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0030054 "cell junction" evidence=IEA] [GO:0045211 "postsynaptic
membrane" evidence=IEA] InterPro:IPR002289 InterPro:IPR006028
InterPro:IPR006029 InterPro:IPR006201 InterPro:IPR006202
InterPro:IPR018000 Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252
PRINTS:PR00253 PRINTS:PR01160 PROSITE:PS00236 GO:GO:0016021
GO:GO:0005886 GO:GO:0030054 GO:GO:0045211 GO:GO:0005230
GO:GO:0004890 Gene3D:2.70.170.10 PANTHER:PTHR18945 SUPFAM:SSF90112
SUPFAM:SSF63712 TIGRFAMs:TIGR00860 EMBL:AC107383 HGNC:HGNC:4081
EMBL:AC097712 EMBL:AC105394 EMBL:AC107392 IPI:IPI01009264
ProteinModelPortal:F5GXV5 SMR:F5GXV5 Ensembl:ENST00000538619
UCSC:uc011bze.2 ArrayExpress:F5GXV5 Bgee:F5GXV5 Uniprot:F5GXV5
Length = 404
Score = 230 (86.0 bits), Expect = 7.2e-28, Sum P(2) = 7.2e-28
Identities = 41/102 (40%), Positives = 64/102 (62%)
Query: 100 YSSLTLTFILNRQYGFYLMDFYAPSILLVCISWVSFWMAPDAVPGRTILGASTMLTFFQL 159
Y L+L+F L R G++++ Y PS L+ +SWVSFW+ DA R LG +T+LT +
Sbjct: 160 YPRLSLSFRLKRNIGYFILQTYMPSTLITILSWVSFWINYDASAARVALGITTVLTMTTI 219
Query: 160 GIETGSSLPNVSYIRSNDVWFFACTVFIFLSLAEFAFVNTIW 201
+LP + Y+++ D++ C VF+FL+L E+AFVN I+
Sbjct: 220 STHLRETLPKIPYVKAIDIYLMGCFVFVFLALLEYAFVNYIF 261
Score = 105 (42.0 bits), Expect = 7.2e-28, Sum P(2) = 7.2e-28
Identities = 20/78 (25%), Positives = 39/78 (50%)
Query: 17 QEFKVQLLLQLHWKDPRLEYRHYAPHITEMVGERNFIQNIWTPHIYLTNERDSLVLGLYR 76
+++ + + Q WKD RL Y ++T + +W P Y N++ S V G+
Sbjct: 10 EDYTLTMYFQQSWKDKRLSYSGIPLNLTL---DNRVADQLWVPDTYFLNDKKSFVHGVTV 66
Query: 77 RDMLVSILPDGDMLFSTR 94
++ ++ + PDG +L+ R
Sbjct: 67 KNRMIRLHPDGTVLYGLR 84
>ZFIN|ZDB-GENE-111215-5 [details] [associations]
symbol:gabrb2l "gamma-aminobutyric acid (GABA) A
receptor, beta 2 like" species:7955 "Danio rerio" [GO:0005216 "ion
channel activity" evidence=IEA] [GO:0006810 "transport"
evidence=IEA] [GO:0006811 "ion transport" evidence=IEA] [GO:0016020
"membrane" evidence=IEA] [GO:0016021 "integral to membrane"
evidence=IEA] [GO:0045211 "postsynaptic membrane" evidence=IEA]
[GO:0005230 "extracellular ligand-gated ion channel activity"
evidence=IEA] [GO:0004890 "GABA-A receptor activity" evidence=IEA]
[GO:0030054 "cell junction" evidence=IEA] [GO:0005886 "plasma
membrane" evidence=IEA] [GO:0045202 "synapse" evidence=IEA]
InterPro:IPR002289 InterPro:IPR006028 InterPro:IPR006029
InterPro:IPR006201 InterPro:IPR006202 InterPro:IPR018000
Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252 PRINTS:PR00253
PRINTS:PR01160 PROSITE:PS00236 ZFIN:ZDB-GENE-111215-5 GO:GO:0016021
GO:GO:0005886 GO:GO:0030054 GO:GO:0045211 GO:GO:0005230
GO:GO:0004890 Gene3D:2.70.170.10 PANTHER:PTHR18945 SUPFAM:SSF90112
SUPFAM:SSF63712 TIGRFAMs:TIGR00860 HOVERGEN:HBG051707
eggNOG:NOG265706 EMBL:BC142872 IPI:IPI00854121 UniGene:Dr.111185
ProteinModelPortal:A5PLE3 Uniprot:A5PLE3
Length = 427
Score = 232 (86.7 bits), Expect = 8.3e-28, Sum P(2) = 8.3e-28
Identities = 45/114 (39%), Positives = 71/114 (62%)
Query: 88 DMLFSTRSRAYMYSSLTLTFILNRQYGFYLMDFYAPSILLVCISWVSFWMAPDAVPGRTI 147
+++FST S Y L+L+F L R G++++ Y PSIL+ +SWVSFW+ DA R
Sbjct: 223 NVVFSTGS----YPRLSLSFKLKRNIGYFILQTYMPSILITILSWVSFWINYDASAARVA 278
Query: 148 LGASTMLTFFQLGIETGSSLPNVSYIRSNDVWFFACTVFIFLSLAEFAFVNTIW 201
LG +T+LT + +LP + Y+++ D++ C VF+FL+L E+A VN I+
Sbjct: 279 LGITTVLTMTTINTHLRETLPKIPYVKAIDMYLMGCFVFVFLALLEYALVNYIF 332
Score = 104 (41.7 bits), Expect = 8.3e-28, Sum P(2) = 8.3e-28
Identities = 22/91 (24%), Positives = 43/91 (47%)
Query: 8 VDIGNLSFQQEFKVQLLLQLH----WKDPRLEYRHYAPHITEMVGERNFIQNIWTPHIYL 63
+DI ++ E + L ++ W+D RL Y ++T + +W P Y
Sbjct: 68 IDIASIDMVSEVNMDYTLTMYFQQAWRDKRLSYSEIPLNLTL---DNRVADQLWVPDTYF 124
Query: 64 TNERDSLVLGLYRRDMLVSILPDGDMLFSTR 94
N++ S V G+ ++ ++ + PDG +L+ R
Sbjct: 125 LNDKKSFVHGVTVKNRMIRLHPDGTVLYGLR 155
>WB|WBGene00000232 [details] [associations]
symbol:avr-14 species:6239 "Caenorhabditis elegans"
[GO:0006811 "ion transport" evidence=IEA;IDA] [GO:0016020
"membrane" evidence=IEA;IDA] [GO:0016021 "integral to membrane"
evidence=IEA] [GO:0005230 "extracellular ligand-gated ion channel
activity" evidence=IEA] [GO:0006810 "transport" evidence=IEA]
[GO:0045211 "postsynaptic membrane" evidence=IEA] [GO:0042493
"response to drug" evidence=IGI] [GO:0031987 "locomotion involved
in locomotory behavior" evidence=IGI;IMP] [GO:0043051 "regulation
of pharyngeal pumping" evidence=IGI;IMP] [GO:0008144 "drug binding"
evidence=IGI] [GO:0008068 "extracellular-glutamate-gated chloride
channel activity" evidence=IDA] InterPro:IPR006028
InterPro:IPR006029 InterPro:IPR006201 InterPro:IPR006202
InterPro:IPR018000 Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252
PRINTS:PR00253 PROSITE:PS00236 GO:GO:0016021 GO:GO:0005886
GO:GO:0016020 GO:GO:0042493 GO:GO:0008144 GO:GO:0030054
GO:GO:0045211 Gene3D:2.70.170.10 PANTHER:PTHR18945 SUPFAM:SSF90112
SUPFAM:SSF63712 TIGRFAMs:TIGR00860 GO:GO:0043051 EMBL:FO080115
GO:GO:0031987 GeneTree:ENSGT00630000089685 HSSP:P23415 KO:K05273
GO:GO:0008068 GeneID:172270 KEGG:cel:CELE_B0207.12 UCSC:B0207.12a
CTD:172270 NextBio:874763 RefSeq:NP_001020963.1
ProteinModelPortal:Q95Q97 SMR:Q95Q97 PRIDE:Q95Q97
EnsemblMetazoa:B0207.12b WormBase:B0207.12b InParanoid:Q95Q97
ArrayExpress:Q95Q97 Uniprot:Q95Q97
Length = 430
Score = 242 (90.2 bits), Expect = 8.6e-28, Sum P(2) = 8.6e-28
Identities = 47/99 (47%), Positives = 60/99 (60%)
Query: 100 YSSLTLTFILNRQYGFYLMDFYAPSILLVCISWVSFWMAPDAVPGRTILGASTMLTFFQL 159
YS + L R+Y +YL+ Y P I+LV +SWVSFW+ DAVP R LG +T+LT
Sbjct: 240 YSCARVVLRLRREYSYYLIQLYIPCIMLVVVSWVSFWLDKDAVPARVSLGVTTLLTMTTQ 299
Query: 160 GIETGSSLPNVSYIRSNDVWFFACTVFIFLSLAEFAFVN 198
S LP VSYI++ DVW C FIF +L E+A VN
Sbjct: 300 ASGINSKLPPVSYIKAVDVWIGVCLAFIFGALLEYAVVN 338
Score = 93 (37.8 bits), Expect = 8.6e-28, Sum P(2) = 8.6e-28
Identities = 31/122 (25%), Positives = 56/122 (45%)
Query: 1 MSATSKLVDIGNLSFQQEFKVQLLLQLHWKDPRLEYRHYA--------PHITEMVGER-N 51
+ + SK+ D+ N+ E+ Q + W D RL Y Y P + E +
Sbjct: 66 LRSISKIDDV-NM----EYSAQFTFREEWTDQRLAYERYEESGDTEVPPFVVLATSENAD 120
Query: 52 FIQNIWTPHIYLTNERDSLVLGLYRRDMLVSILPDGDMLFSTRSRAYMYSSLTLTFI-LN 110
Q IW P + NE+++ + + ++L+ I +G +L+S R + ++L F L+
Sbjct: 121 QSQQIWMPDTFFQNEKEARRHLIDKPNVLIRIHKNGQILYSVRLSLVLSCPMSLEFYPLD 180
Query: 111 RQ 112
RQ
Sbjct: 181 RQ 182
>FB|FBgn0039840 [details] [associations]
symbol:CG11340 species:7227 "Drosophila melanogaster"
[GO:0016935 "glycine-gated chloride channel complex" evidence=ISS]
[GO:0016934 "extracellular-glycine-gated chloride channel activity"
evidence=ISS] [GO:0006811 "ion transport" evidence=IEA] [GO:0045211
"postsynaptic membrane" evidence=IEA] InterPro:IPR006028
InterPro:IPR006029 InterPro:IPR006201 InterPro:IPR006202
InterPro:IPR018000 Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252
PRINTS:PR00253 PROSITE:PS00236 EMBL:AE014297 GO:GO:0016021
GO:GO:0005886 GO:GO:0030054 GO:GO:0045211 GO:GO:0005230
Gene3D:2.70.170.10 PANTHER:PTHR18945 SUPFAM:SSF90112
SUPFAM:SSF63712 GeneTree:ENSGT00540000070314 InterPro:IPR015680
PANTHER:PTHR18945:SF26 RefSeq:NP_651861.1 ProteinModelPortal:Q9V9Y4
SMR:Q9V9Y4 IntAct:Q9V9Y4 MINT:MINT-933396 PRIDE:Q9V9Y4
EnsemblMetazoa:FBtr0085766 GeneID:43703 KEGG:dme:Dmel_CG11340
UCSC:CG11340-RA FlyBase:FBgn0039840 eggNOG:NOG274690
InParanoid:Q9V9Y4 OMA:ITIETPI OrthoDB:EOG46WWQS PhylomeDB:Q9V9Y4
GenomeRNAi:43703 NextBio:835338 ArrayExpress:Q9V9Y4 Bgee:Q9V9Y4
Uniprot:Q9V9Y4
Length = 526
Score = 315 (115.9 bits), Expect = 9.1e-28, P = 9.1e-28
Identities = 60/134 (44%), Positives = 86/134 (64%)
Query: 69 SLVLGLYRRDMLVSILPDGDMLFSTRSRAYMYSSLTLTFILNRQYGFYLMDFYAPSILLV 128
+L+ LY + VS + S S YS ++ T +L R+ G+Y++D++ PSI++V
Sbjct: 257 NLIGSLYNESIRVS----NESYMSHGSLEGNYSIISFTVLLTREVGYYVIDYFLPSIMIV 312
Query: 129 CISWVSFWMAPDAVPGRTILGASTMLTFFQLGIETGSSLPNVSYIRSNDVWFFACTVFIF 188
ISWVSFW+ D P RT LG +T+L+F L + ++L VSY+ ++VWF CT+FIF
Sbjct: 313 TISWVSFWLQADQTPARTTLGCTTLLSFITLSLSQENNLMKVSYVTMSEVWFLVCTIFIF 372
Query: 189 LSLAEFAFVNTIWR 202
SL EFAFVNTIWR
Sbjct: 373 GSLVEFAFVNTIWR 386
Score = 189 (71.6 bits), Expect = 5.6e-14, P = 5.6e-14
Identities = 47/124 (37%), Positives = 70/124 (56%)
Query: 12 NL-SFQQEFKVQLLLQLHWKDPRLEYRHYAPHITE-MVGERNFIQNIWTPHIYLTNERDS 69
NL S +F VQ LLQL + DPRL + Y P+ + ++GE + +W PHI+LTNE+ S
Sbjct: 116 NLDSSDLQFTVQGLLQLRYLDPRLAFSSYLPNRRQPIMGESELKKMLWVPHIFLTNEQAS 175
Query: 70 LVLGLYRRDMLVSILPDGDMLFSTRSRAYMYSSLTLT-FILNRQYGFYLMDFYAPSILLV 128
VLG +D L SI P+G +L STR +A +Y + F + Q ++ + + LV
Sbjct: 176 TVLGTSAKDELTSIYPNGTVLTSTRLQATLYCWMNFQKFPFDEQKCKTTLESWMYNTTLV 235
Query: 129 CISW 132
+ W
Sbjct: 236 QLHW 239
>UNIPROTKB|F5H3D2 [details] [associations]
symbol:GABRB3 "Gamma-aminobutyric acid receptor subunit
beta-3" species:9606 "Homo sapiens" [GO:0004890 "GABA-A receptor
activity" evidence=IEA] [GO:0005230 "extracellular ligand-gated ion
channel activity" evidence=IEA] [GO:0005886 "plasma membrane"
evidence=IEA] [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0030054 "cell junction" evidence=IEA] [GO:0045211 "postsynaptic
membrane" evidence=IEA] [GO:0007605 "sensory perception of sound"
evidence=IEA] [GO:0060119 "inner ear receptor cell development"
evidence=IEA] [GO:0060384 "innervation" evidence=IEA] [GO:0090102
"cochlea development" evidence=IEA] InterPro:IPR002289
InterPro:IPR006028 InterPro:IPR006029 InterPro:IPR006201
InterPro:IPR006202 InterPro:IPR018000 Pfam:PF02931 Pfam:PF02932
PRINTS:PR00252 PRINTS:PR00253 PRINTS:PR01160 PROSITE:PS00236
GO:GO:0016021 GO:GO:0005886 GO:GO:0030054 GO:GO:0045211
GO:GO:0005230 GO:GO:0004890 Gene3D:2.70.170.10 PANTHER:PTHR18945
SUPFAM:SSF90112 SUPFAM:SSF63712 TIGRFAMs:TIGR00860 KO:K05181
CTD:2562 RefSeq:NP_001178249.1 UniGene:Hs.302352 DNASU:2562
GeneID:2562 KEGG:hsa:2562 HGNC:HGNC:4083 ChiTaRS:GABRB3
GenomeRNAi:2562 NextBio:10121 EMBL:AC009878 EMBL:AC011196
EMBL:AC104569 EMBL:AC127511 EMBL:AC135999 EMBL:AC145167
EMBL:AC145196 EMBL:EU606048 IPI:IPI00975640
ProteinModelPortal:F5H3D2 SMR:F5H3D2 PRIDE:F5H3D2
Ensembl:ENST00000545868 ArrayExpress:F5H3D2 Bgee:F5H3D2
Uniprot:F5H3D2
Length = 388
Score = 233 (87.1 bits), Expect = 1.2e-27, Sum P(2) = 1.2e-27
Identities = 42/102 (41%), Positives = 65/102 (63%)
Query: 100 YSSLTLTFILNRQYGFYLMDFYAPSILLVCISWVSFWMAPDAVPGRTILGASTMLTFFQL 159
Y L+L+F L R G++++ Y PSIL+ +SWVSFW+ DA R LG +T+LT +
Sbjct: 145 YPRLSLSFRLKRNIGYFILQTYMPSILITILSWVSFWINYDASAARVALGITTVLTMTTI 204
Query: 160 GIETGSSLPNVSYIRSNDVWFFACTVFIFLSLAEFAFVNTIW 201
+LP + Y+++ D++ C VF+FL+L E+AFVN I+
Sbjct: 205 NTHLRETLPKIPYVKAIDMYLMGCFVFVFLALLEYAFVNYIF 246
Score = 98 (39.6 bits), Expect = 1.2e-27, Sum P(2) = 1.2e-27
Identities = 19/72 (26%), Positives = 36/72 (50%)
Query: 23 LLLQLHWKDPRLEYRHYAPHITEMVGERNFIQNIWTPHIYLTNERDSLVLGLYRRDMLVS 82
+ Q +W+D RL Y ++T + +W P Y N++ S V G+ ++ ++
Sbjct: 1 MYFQQYWRDKRLAYSGIPLNLTL---DNRVADQLWVPDTYFLNDKKSFVHGVTVKNRMIR 57
Query: 83 ILPDGDMLFSTR 94
+ PDG +L+ R
Sbjct: 58 LHPDGTVLYGLR 69
>UNIPROTKB|P28472 [details] [associations]
symbol:GABRB3 "Gamma-aminobutyric acid receptor subunit
beta-3" species:9606 "Homo sapiens" [GO:0004890 "GABA-A receptor
activity" evidence=IEA] [GO:0005230 "extracellular ligand-gated ion
channel activity" evidence=IEA] [GO:0005254 "chloride channel
activity" evidence=IEA] [GO:0030054 "cell junction" evidence=IEA]
[GO:0034707 "chloride channel complex" evidence=IEA] [GO:0007605
"sensory perception of sound" evidence=IEA] [GO:0060119 "inner ear
receptor cell development" evidence=IEA] [GO:0060384 "innervation"
evidence=IEA] [GO:0090102 "cochlea development" evidence=IEA]
[GO:0045211 "postsynaptic membrane" evidence=IEA] [GO:0005887
"integral to plasma membrane" evidence=TAS] [GO:0006810 "transport"
evidence=TAS] [GO:0007165 "signal transduction" evidence=TAS]
[GO:0005886 "plasma membrane" evidence=TAS] [GO:0007268 "synaptic
transmission" evidence=TAS] [GO:0034220 "ion transmembrane
transport" evidence=TAS] [GO:0055085 "transmembrane transport"
evidence=TAS] Reactome:REACT_13685 Reactome:REACT_15518
InterPro:IPR002289 InterPro:IPR006028 InterPro:IPR006029
InterPro:IPR006201 InterPro:IPR006202 InterPro:IPR018000
Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252 PRINTS:PR00253
PRINTS:PR01160 PROSITE:PS00236 GO:GO:0005887 GO:GO:0007268
GO:GO:0030054 GO:GO:0045211 GO:GO:0005230 GO:GO:0004890
Gene3D:2.70.170.10 PANTHER:PTHR18945 SUPFAM:SSF90112
SUPFAM:SSF63712 TIGRFAMs:TIGR00860 GO:GO:0034220 GO:GO:0034707
GO:GO:0005254 DrugBank:DB00186 Orphanet:106 Orphanet:64280
DrugBank:DB00683 HOVERGEN:HBG051707 DrugBank:DB00189
DrugBank:DB00690 eggNOG:NOG77438 KO:K05181 OrthoDB:EOG45756F
CTD:2562 EMBL:M82919 EMBL:BC010641 EMBL:L04311 IPI:IPI00003467
IPI:IPI00217235 PIR:A55275 PIR:B45468 RefSeq:NP_000805.1
RefSeq:NP_001178249.1 RefSeq:NP_001178250.1 RefSeq:NP_068712.1
UniGene:Hs.302352 ProteinModelPortal:P28472 SMR:P28472
IntAct:P28472 STRING:P28472 PhosphoSite:P28472 DMDM:120773
PaxDb:P28472 PRIDE:P28472 DNASU:2562 Ensembl:ENST00000299267
Ensembl:ENST00000311550 GeneID:2562 KEGG:hsa:2562 UCSC:uc001zaz.3
UCSC:uc001zba.3 GeneCards:GC15M026788 HGNC:HGNC:4083 MIM:137192
MIM:612269 neXtProt:NX_P28472 PharmGKB:PA28497 PhylomeDB:P28472
BindingDB:P28472 ChEMBL:CHEMBL1847 ChiTaRS:GABRB3 GenomeRNAi:2562
NextBio:10121 ArrayExpress:P28472 Bgee:P28472 CleanEx:HS_GABRB3
Genevestigator:P28472 GermOnline:ENSG00000166206 Uniprot:P28472
Length = 473
Score = 233 (87.1 bits), Expect = 1.3e-27, Sum P(2) = 1.3e-27
Identities = 42/102 (41%), Positives = 65/102 (63%)
Query: 100 YSSLTLTFILNRQYGFYLMDFYAPSILLVCISWVSFWMAPDAVPGRTILGASTMLTFFQL 159
Y L+L+F L R G++++ Y PSIL+ +SWVSFW+ DA R LG +T+LT +
Sbjct: 230 YPRLSLSFRLKRNIGYFILQTYMPSILITILSWVSFWINYDASAARVALGITTVLTMTTI 289
Query: 160 GIETGSSLPNVSYIRSNDVWFFACTVFIFLSLAEFAFVNTIW 201
+LP + Y+++ D++ C VF+FL+L E+AFVN I+
Sbjct: 290 NTHLRETLPKIPYVKAIDMYLMGCFVFVFLALLEYAFVNYIF 331
Score = 104 (41.7 bits), Expect = 1.3e-27, Sum P(2) = 1.3e-27
Identities = 22/91 (24%), Positives = 44/91 (48%)
Query: 8 VDIGNLSFQQE----FKVQLLLQLHWKDPRLEYRHYAPHITEMVGERNFIQNIWTPHIYL 63
+DI ++ E + + + Q +W+D RL Y ++T + +W P Y
Sbjct: 67 IDIASIDMVSEVNMDYTLTMYFQQYWRDKRLAYSGIPLNLTL---DNRVADQLWVPDTYF 123
Query: 64 TNERDSLVLGLYRRDMLVSILPDGDMLFSTR 94
N++ S V G+ ++ ++ + PDG +L+ R
Sbjct: 124 LNDKKSFVHGVTVKNRMIRLHPDGTVLYGLR 154
>MGI|MGI:95621 [details] [associations]
symbol:Gabrb3 "gamma-aminobutyric acid (GABA) A receptor,
subunit beta 3" species:10090 "Mus musculus" [GO:0004890 "GABA-A
receptor activity" evidence=ISO] [GO:0005216 "ion channel activity"
evidence=IEA] [GO:0005230 "extracellular ligand-gated ion channel
activity" evidence=IEA] [GO:0005254 "chloride channel activity"
evidence=ISO] [GO:0005886 "plasma membrane" evidence=ISO]
[GO:0006810 "transport" evidence=IEA] [GO:0006811 "ion transport"
evidence=IEA] [GO:0006821 "chloride transport" evidence=IEA]
[GO:0007214 "gamma-aminobutyric acid signaling pathway"
evidence=ISO] [GO:0007605 "sensory perception of sound"
evidence=IMP] [GO:0016020 "membrane" evidence=IEA] [GO:0016021
"integral to membrane" evidence=IEA] [GO:0030054 "cell junction"
evidence=IEA] [GO:0034707 "chloride channel complex" evidence=IEA]
[GO:0035612 "AP-2 adaptor complex binding" evidence=ISO]
[GO:0043195 "terminal bouton" evidence=ISO] [GO:0045202 "synapse"
evidence=IEA] [GO:0045211 "postsynaptic membrane" evidence=IEA]
[GO:0048666 "neuron development" evidence=IMP] [GO:0051932
"synaptic transmission, GABAergic" evidence=ISO] [GO:0060077
"inhibitory synapse" evidence=ISO] [GO:0060119 "inner ear receptor
cell development" evidence=IMP] [GO:0060384 "innervation"
evidence=IMP] [GO:0090102 "cochlea development" evidence=IMP]
InterPro:IPR002289 InterPro:IPR006028 InterPro:IPR006029
InterPro:IPR006201 InterPro:IPR006202 InterPro:IPR018000
Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252 PRINTS:PR00253
PRINTS:PR01160 PROSITE:PS00236 MGI:MGI:95621 GO:GO:0005886
GO:GO:0030054 GO:GO:0045211 GO:GO:0005230 GO:GO:0004890
Gene3D:2.70.170.10 PANTHER:PTHR18945 SUPFAM:SSF90112
SUPFAM:SSF63712 TIGRFAMs:TIGR00860 GO:GO:0007214 GO:GO:0007605
GO:GO:0034707 GO:GO:0005254 GO:GO:0090102 GO:GO:0060119
HOVERGEN:HBG051707 GO:GO:0060384 eggNOG:NOG77438
GeneTree:ENSGT00630000089685 HOGENOM:HOG000231335 KO:K05181
OrthoDB:EOG45756F CTD:2562 ChiTaRS:GABRB3 EMBL:U14420 EMBL:AK039070
EMBL:AK147247 IPI:IPI00130546 PIR:S53532 RefSeq:NP_032097.1
UniGene:Mm.8004 ProteinModelPortal:P63080 SMR:P63080 STRING:P63080
PaxDb:P63080 PRIDE:P63080 DNASU:14402 Ensembl:ENSMUST00000039697
GeneID:14402 KEGG:mmu:14402 UCSC:uc011xte.1 BindingDB:P63080
ChEMBL:CHEMBL4231 NextBio:285953 Bgee:P63080 Genevestigator:P63080
GermOnline:ENSMUSG00000033676 Uniprot:P63080
Length = 473
Score = 233 (87.1 bits), Expect = 1.3e-27, Sum P(2) = 1.3e-27
Identities = 42/102 (41%), Positives = 65/102 (63%)
Query: 100 YSSLTLTFILNRQYGFYLMDFYAPSILLVCISWVSFWMAPDAVPGRTILGASTMLTFFQL 159
Y L+L+F L R G++++ Y PSIL+ +SWVSFW+ DA R LG +T+LT +
Sbjct: 230 YPRLSLSFRLKRNIGYFILQTYMPSILITILSWVSFWINYDASAARVALGITTVLTMTTI 289
Query: 160 GIETGSSLPNVSYIRSNDVWFFACTVFIFLSLAEFAFVNTIW 201
+LP + Y+++ D++ C VF+FL+L E+AFVN I+
Sbjct: 290 NTHLRETLPKIPYVKAIDMYLMGCFVFVFLALLEYAFVNYIF 331
Score = 104 (41.7 bits), Expect = 1.3e-27, Sum P(2) = 1.3e-27
Identities = 22/91 (24%), Positives = 44/91 (48%)
Query: 8 VDIGNLSFQQE----FKVQLLLQLHWKDPRLEYRHYAPHITEMVGERNFIQNIWTPHIYL 63
+DI ++ E + + + Q +W+D RL Y ++T + +W P Y
Sbjct: 67 IDIASIDMVSEVNMDYTLTMYFQQYWRDKRLAYSGIPLNLTL---DNRVADQLWVPDTYF 123
Query: 64 TNERDSLVLGLYRRDMLVSILPDGDMLFSTR 94
N++ S V G+ ++ ++ + PDG +L+ R
Sbjct: 124 LNDKKSFVHGVTVKNRMIRLHPDGTVLYGLR 154
>RGD|2651 [details] [associations]
symbol:Gabrb3 "gamma-aminobutyric acid (GABA) A receptor, beta 3"
species:10116 "Rattus norvegicus" [GO:0004890 "GABA-A receptor
activity" evidence=IDA;TAS] [GO:0005230 "extracellular ligand-gated
ion channel activity" evidence=IEA] [GO:0005254 "chloride channel
activity" evidence=IDA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005886 "plasma membrane" evidence=IDA] [GO:0007605 "sensory
perception of sound" evidence=ISO] [GO:0030054 "cell junction"
evidence=IEA] [GO:0034707 "chloride channel complex" evidence=IEA]
[GO:0035612 "AP-2 adaptor complex binding" evidence=IPI] [GO:0043195
"terminal bouton" evidence=IDA] [GO:0045211 "postsynaptic membrane"
evidence=IEA] [GO:0048666 "neuron development" evidence=ISO]
[GO:0051932 "synaptic transmission, GABAergic" evidence=IDA]
[GO:0060077 "inhibitory synapse" evidence=IDA] [GO:0060119 "inner ear
receptor cell development" evidence=ISO] [GO:0060384 "innervation"
evidence=ISO] [GO:0090102 "cochlea development" evidence=ISO]
InterPro:IPR002289 InterPro:IPR006028 InterPro:IPR006029
InterPro:IPR006201 InterPro:IPR006202 InterPro:IPR018000 Pfam:PF02931
Pfam:PF02932 PRINTS:PR00252 PRINTS:PR00253 PRINTS:PR01160
PROSITE:PS00236 RGD:2651 GO:GO:0005886 GO:GO:0030054 GO:GO:0045211
GO:GO:0005230 GO:GO:0004890 Gene3D:2.70.170.10 PANTHER:PTHR18945
SUPFAM:SSF90112 SUPFAM:SSF63712 TIGRFAMs:TIGR00860 GO:GO:0043195
GO:GO:0034707 GO:GO:0005254 GO:GO:0051932 HOVERGEN:HBG051707
eggNOG:NOG77438 HOGENOM:HOG000231335 KO:K05181 CTD:2562 EMBL:X15468
EMBL:L04310 IPI:IPI00327083 PIR:S04466 RefSeq:NP_058761.1
UniGene:Rn.208228 ProteinModelPortal:P63079 SMR:P63079 IntAct:P63079
STRING:P63079 PRIDE:P63079 GeneID:24922 KEGG:rno:24922 UCSC:RGD:2651
InParanoid:P63079 BindingDB:P63079 ChEMBL:CHEMBL316 NextBio:604867
ArrayExpress:P63079 Genevestigator:P63079
GermOnline:ENSRNOG00000014938 GO:GO:0060077 Uniprot:P63079
Length = 473
Score = 233 (87.1 bits), Expect = 1.3e-27, Sum P(2) = 1.3e-27
Identities = 42/102 (41%), Positives = 65/102 (63%)
Query: 100 YSSLTLTFILNRQYGFYLMDFYAPSILLVCISWVSFWMAPDAVPGRTILGASTMLTFFQL 159
Y L+L+F L R G++++ Y PSIL+ +SWVSFW+ DA R LG +T+LT +
Sbjct: 230 YPRLSLSFRLKRNIGYFILQTYMPSILITILSWVSFWINYDASAARVALGITTVLTMTTI 289
Query: 160 GIETGSSLPNVSYIRSNDVWFFACTVFIFLSLAEFAFVNTIW 201
+LP + Y+++ D++ C VF+FL+L E+AFVN I+
Sbjct: 290 NTHLRETLPKIPYVKAIDMYLMGCFVFVFLALLEYAFVNYIF 331
Score = 104 (41.7 bits), Expect = 1.3e-27, Sum P(2) = 1.3e-27
Identities = 22/91 (24%), Positives = 44/91 (48%)
Query: 8 VDIGNLSFQQE----FKVQLLLQLHWKDPRLEYRHYAPHITEMVGERNFIQNIWTPHIYL 63
+DI ++ E + + + Q +W+D RL Y ++T + +W P Y
Sbjct: 67 IDIASIDMVSEVNMDYTLTMYFQQYWRDKRLAYSGIPLNLTL---DNRVADQLWVPDTYF 123
Query: 64 TNERDSLVLGLYRRDMLVSILPDGDMLFSTR 94
N++ S V G+ ++ ++ + PDG +L+ R
Sbjct: 124 LNDKKSFVHGVTVKNRMIRLHPDGTVLYGLR 154
>UNIPROTKB|P19019 [details] [associations]
symbol:GABRB3 "Gamma-aminobutyric acid receptor subunit
beta-3" species:9031 "Gallus gallus" [GO:0004890 "GABA-A receptor
activity" evidence=IEA] [GO:0005230 "extracellular ligand-gated ion
channel activity" evidence=IEA] [GO:0005254 "chloride channel
activity" evidence=IEA] [GO:0030054 "cell junction" evidence=IEA]
[GO:0034707 "chloride channel complex" evidence=IEA] [GO:0005886
"plasma membrane" evidence=IEA] [GO:0045211 "postsynaptic membrane"
evidence=IEA] [GO:0007605 "sensory perception of sound"
evidence=IEA] [GO:0060119 "inner ear receptor cell development"
evidence=IEA] [GO:0060384 "innervation" evidence=IEA] [GO:0090102
"cochlea development" evidence=IEA] InterPro:IPR002289
InterPro:IPR006028 InterPro:IPR006029 InterPro:IPR006201
InterPro:IPR006202 InterPro:IPR018000 Pfam:PF02931 Pfam:PF02932
PRINTS:PR00252 PRINTS:PR00253 PRINTS:PR01160 PROSITE:PS00236
GO:GO:0005886 GO:GO:0030054 GO:GO:0045211 GO:GO:0005230
GO:GO:0004890 Gene3D:2.70.170.10 PANTHER:PTHR18945 SUPFAM:SSF90112
SUPFAM:SSF63712 TIGRFAMs:TIGR00860 GO:GO:0034707 GO:GO:0005254
HOVERGEN:HBG051707 eggNOG:NOG77438 HOGENOM:HOG000231335 KO:K05181
OrthoDB:EOG45756F EMBL:X54243 IPI:IPI00591128 PIR:S11440
RefSeq:NP_990677.1 UniGene:Gga.747 ProteinModelPortal:P19019
SMR:P19019 GeneID:396290 KEGG:gga:396290 CTD:2562 InParanoid:P19019
NextBio:20816341 ArrayExpress:P19019 Uniprot:P19019
Length = 476
Score = 233 (87.1 bits), Expect = 1.3e-27, Sum P(2) = 1.3e-27
Identities = 42/102 (41%), Positives = 65/102 (63%)
Query: 100 YSSLTLTFILNRQYGFYLMDFYAPSILLVCISWVSFWMAPDAVPGRTILGASTMLTFFQL 159
Y L+L+F L R G++++ Y PSIL+ +SWVSFW+ DA R LG +T+LT +
Sbjct: 230 YPRLSLSFRLKRNIGYFILQTYMPSILITILSWVSFWINYDASAARVALGITTVLTMTTI 289
Query: 160 GIETGSSLPNVSYIRSNDVWFFACTVFIFLSLAEFAFVNTIW 201
+LP + Y+++ D++ C VF+FL+L E+AFVN I+
Sbjct: 290 NTHLRETLPKIPYVKAIDMYLMGCFVFVFLALLEYAFVNYIF 331
Score = 104 (41.7 bits), Expect = 1.3e-27, Sum P(2) = 1.3e-27
Identities = 22/91 (24%), Positives = 44/91 (48%)
Query: 8 VDIGNLSFQQE----FKVQLLLQLHWKDPRLEYRHYAPHITEMVGERNFIQNIWTPHIYL 63
+DI ++ E + + + Q +W+D RL Y ++T + +W P Y
Sbjct: 67 IDIASIDMVSEVNMDYTLTMYFQQYWRDKRLAYAGIPLNLTL---DNRVADQLWVPDTYF 123
Query: 64 TNERDSLVLGLYRRDMLVSILPDGDMLFSTR 94
N++ S V G+ ++ ++ + PDG +L+ R
Sbjct: 124 LNDKKSFVHGVTVKNRMIRLHPDGTVLYGLR 154
>ZFIN|ZDB-GENE-101102-2 [details] [associations]
symbol:gabrb3 "gamma-aminobutyric acid (GABA) A
receptor, beta 3" species:7955 "Danio rerio" [GO:0005216 "ion
channel activity" evidence=IEA] [GO:0006810 "transport"
evidence=IEA] [GO:0006811 "ion transport" evidence=IEA] [GO:0016020
"membrane" evidence=IEA] [GO:0016021 "integral to membrane"
evidence=IEA] [GO:0045211 "postsynaptic membrane" evidence=IEA]
[GO:0005230 "extracellular ligand-gated ion channel activity"
evidence=IEA] [GO:0004890 "GABA-A receptor activity" evidence=IEA]
[GO:0045202 "synapse" evidence=IEA] [GO:0030054 "cell junction"
evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
InterPro:IPR002289 InterPro:IPR006028 InterPro:IPR006029
InterPro:IPR006201 InterPro:IPR006202 InterPro:IPR018000
Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252 PRINTS:PR00253
PRINTS:PR01160 PROSITE:PS00236 ZFIN:ZDB-GENE-101102-2 GO:GO:0016021
GO:GO:0005886 GO:GO:0030054 GO:GO:0045211 GO:GO:0005230
GO:GO:0004890 Gene3D:2.70.170.10 PANTHER:PTHR18945 SUPFAM:SSF90112
SUPFAM:SSF63712 TIGRFAMs:TIGR00860 GeneTree:ENSGT00630000089685
EMBL:BX927286 EMBL:CR405707 IPI:IPI00898271
Ensembl:ENSDART00000087300 Uniprot:E7EXG0
Length = 532
Score = 235 (87.8 bits), Expect = 1.4e-27, Sum P(2) = 1.4e-27
Identities = 45/114 (39%), Positives = 72/114 (63%)
Query: 88 DMLFSTRSRAYMYSSLTLTFILNRQYGFYLMDFYAPSILLVCISWVSFWMAPDAVPGRTI 147
+++FST + Y L+L+F L R G++++ Y PSIL+ +SWVSFW+ DA R
Sbjct: 256 NVVFSTGA----YPRLSLSFKLKRNIGYFILQTYMPSILITILSWVSFWINYDASAARVA 311
Query: 148 LGASTMLTFFQLGIETGSSLPNVSYIRSNDVWFFACTVFIFLSLAEFAFVNTIW 201
LG +T+LT + +LP + Y+++ D++ C VF+FL+L E+AFVN I+
Sbjct: 312 LGITTVLTMTTINTHLRETLPKIPYVKAIDMYLMGCFVFVFLALLEYAFVNYIF 365
Score = 104 (41.7 bits), Expect = 1.4e-27, Sum P(2) = 1.4e-27
Identities = 22/96 (22%), Positives = 45/96 (46%)
Query: 3 ATSKLVDIGNLSFQQE----FKVQLLLQLHWKDPRLEYRHYAPHITEMVGERNFIQNIWT 58
A +D+ ++ E + + + Q +W+D RL Y ++T + +W
Sbjct: 96 AVGMSIDVASIDMVSEVNMDYTLTMYFQQYWRDKRLAYTGIPLNLTL---DNRVADQLWV 152
Query: 59 PHIYLTNERDSLVLGLYRRDMLVSILPDGDMLFSTR 94
P Y N++ S V G+ ++ ++ + PDG +L+ R
Sbjct: 153 PDTYFLNDKKSFVHGVTVKNRMIRLHPDGTVLYGLR 188
>UNIPROTKB|F1PEG2 [details] [associations]
symbol:GABRB1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0045211 "postsynaptic membrane" evidence=IEA]
[GO:0030054 "cell junction" evidence=IEA] [GO:0016021 "integral to
membrane" evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0005230 "extracellular ligand-gated ion channel activity"
evidence=IEA] [GO:0004890 "GABA-A receptor activity" evidence=IEA]
InterPro:IPR002289 InterPro:IPR006028 InterPro:IPR006029
InterPro:IPR006201 InterPro:IPR006202 InterPro:IPR018000
Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252 PRINTS:PR00253
PRINTS:PR01160 PROSITE:PS00236 GO:GO:0016021 GO:GO:0005886
GO:GO:0030054 GO:GO:0045211 GO:GO:0005230 GO:GO:0004890
Gene3D:2.70.170.10 PANTHER:PTHR18945 SUPFAM:SSF90112
SUPFAM:SSF63712 TIGRFAMs:TIGR00860 GeneTree:ENSGT00630000089685
OMA:YRKPMSS EMBL:AAEX03009038 Ensembl:ENSCAFT00000002993
Uniprot:F1PEG2
Length = 390
Score = 230 (86.0 bits), Expect = 2.2e-27, Sum P(2) = 2.2e-27
Identities = 41/102 (40%), Positives = 64/102 (62%)
Query: 100 YSSLTLTFILNRQYGFYLMDFYAPSILLVCISWVSFWMAPDAVPGRTILGASTMLTFFQL 159
Y L+L+F L R G++++ Y PS L+ +SWVSFW+ DA R LG +T+LT +
Sbjct: 145 YPRLSLSFRLKRNIGYFILQTYMPSTLITILSWVSFWINYDASAARVALGITTVLTMTTI 204
Query: 160 GIETGSSLPNVSYIRSNDVWFFACTVFIFLSLAEFAFVNTIW 201
+LP + Y+++ D++ C VF+FL+L E+AFVN I+
Sbjct: 205 STHLRETLPKIPYVKAIDIYLMGCFVFVFLALLEYAFVNYIF 246
Score = 99 (39.9 bits), Expect = 2.2e-27, Sum P(2) = 2.2e-27
Identities = 20/72 (27%), Positives = 35/72 (48%)
Query: 23 LLLQLHWKDPRLEYRHYAPHITEMVGERNFIQNIWTPHIYLTNERDSLVLGLYRRDMLVS 82
+ Q WKD RL Y ++T + +W P Y N++ S V G+ ++ ++
Sbjct: 1 MYFQQSWKDKRLSYSGIPLNLTL---DNRVADQLWVPDTYFLNDKKSFVHGVTVKNRMIR 57
Query: 83 ILPDGDMLFSTR 94
+ PDG +L+ R
Sbjct: 58 LHPDGTVLYGLR 69
>UNIPROTKB|E7EV50 [details] [associations]
symbol:GABRB2 "Gamma-aminobutyric acid receptor subunit
beta-2" species:9606 "Homo sapiens" [GO:0004890 "GABA-A receptor
activity" evidence=IEA] [GO:0005230 "extracellular ligand-gated ion
channel activity" evidence=IEA] [GO:0005886 "plasma membrane"
evidence=IEA] [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0030054 "cell junction" evidence=IEA] [GO:0045211 "postsynaptic
membrane" evidence=IEA] InterPro:IPR002289 InterPro:IPR006028
InterPro:IPR006029 InterPro:IPR006201 InterPro:IPR006202
InterPro:IPR018000 Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252
PRINTS:PR00253 PRINTS:PR01160 PROSITE:PS00236 GO:GO:0016021
GO:GO:0005886 GO:GO:0030054 GO:GO:0045211 GO:GO:0005230
GO:GO:0004890 Gene3D:2.70.170.10 PANTHER:PTHR18945 SUPFAM:SSF90112
SUPFAM:SSF63712 TIGRFAMs:TIGR00860 HGNC:HGNC:4082 EMBL:AC008712
EMBL:AC022120 EMBL:AC091882 EMBL:AC091989 IPI:IPI00982847
ProteinModelPortal:E7EV50 SMR:E7EV50 Ensembl:ENST00000517901
ArrayExpress:E7EV50 Bgee:E7EV50 Uniprot:E7EV50
Length = 411
Score = 229 (85.7 bits), Expect = 2.2e-27, Sum P(2) = 2.2e-27
Identities = 44/113 (38%), Positives = 70/113 (61%)
Query: 89 MLFSTRSRAYMYSSLTLTFILNRQYGFYLMDFYAPSILLVCISWVSFWMAPDAVPGRTIL 148
++FST S Y L+L+F L R G++++ Y PSIL+ +SWVSFW+ DA R L
Sbjct: 159 VVFSTGS----YPRLSLSFKLKRNIGYFILQTYMPSILITILSWVSFWINYDASAARVAL 214
Query: 149 GASTMLTFFQLGIETGSSLPNVSYIRSNDVWFFACTVFIFLSLAEFAFVNTIW 201
G +T+LT + +LP + Y+++ D++ C VF+F++L E+A VN I+
Sbjct: 215 GITTVLTMTTINTHLRETLPKIPYVKAIDMYLMGCFVFVFMALLEYALVNYIF 267
Score = 102 (41.0 bits), Expect = 2.2e-27, Sum P(2) = 2.2e-27
Identities = 22/91 (24%), Positives = 43/91 (47%)
Query: 8 VDIGNLSFQQEFKVQLLLQLH----WKDPRLEYRHYAPHITEMVGERNFIQNIWTPHIYL 63
+DI ++ E + L ++ W+D RL Y ++T + +W P Y
Sbjct: 3 IDIASIDMVSEVNMDYTLTMYFQQAWRDKRLSYNVIPLNLTL---DNRVADQLWVPDTYF 59
Query: 64 TNERDSLVLGLYRRDMLVSILPDGDMLFSTR 94
N++ S V G+ ++ ++ + PDG +L+ R
Sbjct: 60 LNDKKSFVHGVTVKNRMIRLHPDGTVLYGLR 90
>ZFIN|ZDB-GENE-041014-174 [details] [associations]
symbol:gabrr2b "gamma-aminobutyric acid (GABA) A
receptor, rho 2b" species:7955 "Danio rerio" [GO:0045211
"postsynaptic membrane" evidence=IEA] [GO:0006810 "transport"
evidence=IEA] [GO:0006811 "ion transport" evidence=IEA] [GO:0016020
"membrane" evidence=IEA] [GO:0016021 "integral to membrane"
evidence=IEA] [GO:0005230 "extracellular ligand-gated ion channel
activity" evidence=IEA] [GO:0030054 "cell junction" evidence=IEA]
[GO:0005886 "plasma membrane" evidence=IEA] [GO:0045202 "synapse"
evidence=IEA] InterPro:IPR006028 InterPro:IPR006029
InterPro:IPR006201 InterPro:IPR006202 InterPro:IPR018000
Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252 PRINTS:PR00253
PROSITE:PS00236 ZFIN:ZDB-GENE-041014-174 GO:GO:0016021
GO:GO:0005886 GO:GO:0030054 GO:GO:0045211 GO:GO:0005230
Gene3D:2.70.170.10 PANTHER:PTHR18945 SUPFAM:SSF90112
SUPFAM:SSF63712 TIGRFAMs:TIGR00860 GeneTree:ENSGT00630000089571
EMBL:BX248418 IPI:IPI00497783 ProteinModelPortal:F1Q9D5
Ensembl:ENSDART00000023304 ArrayExpress:F1Q9D5 Uniprot:F1Q9D5
Length = 427
Score = 220 (82.5 bits), Expect = 2.2e-27, Sum P(2) = 2.2e-27
Identities = 48/114 (42%), Positives = 68/114 (59%)
Query: 91 FSTRSRAYMYSS------LTLTFILNRQYGFYLMDFYAPSILLVCISWVSFWMAPDAVPG 144
F T SR YSS L + F L R F+L+ Y P+ L+V +SWVSFW+ AVP
Sbjct: 196 FHTTSRLAFYSSTGWYNRLYINFTLRRHIFFFLLQTYFPATLMVMLSWVSFWIDRRAVPA 255
Query: 145 RTILGASTMLTFFQLGIETGSSLPNVSYIRSNDVWFFACTVFIFLSLAEFAFVN 198
R LG +T+LT + +S+P VSYI++ D++ + VF+FLS+ E+A VN
Sbjct: 256 RVSLGITTVLTMSTIITGVNASMPRVSYIKAVDIYLWVSFVFVFLSVLEYAAVN 309
Score = 113 (44.8 bits), Expect = 2.2e-27, Sum P(2) = 2.2e-27
Identities = 20/77 (25%), Positives = 41/77 (53%)
Query: 18 EFKVQLLLQLHWKDPRLEYRHYAPHITEMVGERNFIQNIWTPHIYLTNERDSLVLGLYRR 77
+F + L L+ +WKD RL + + H M + ++ IW P ++ + + S +
Sbjct: 60 DFTMTLYLRHYWKDERLSFP--SKHNKSMTFDGRLVKKIWVPDVFFVHSKRSFIHDTTTE 117
Query: 78 DMLVSILPDGDMLFSTR 94
++++ + PDG +L+S R
Sbjct: 118 NIMIRVYPDGHVLYSLR 134
>UNIPROTKB|F5H7N0 [details] [associations]
symbol:GABRB3 "Gamma-aminobutyric acid receptor subunit
beta-3" species:9606 "Homo sapiens" [GO:0004890 "GABA-A receptor
activity" evidence=IEA] [GO:0005230 "extracellular ligand-gated ion
channel activity" evidence=IEA] [GO:0005886 "plasma membrane"
evidence=IEA] [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0030054 "cell junction" evidence=IEA] [GO:0045211 "postsynaptic
membrane" evidence=IEA] InterPro:IPR002289 InterPro:IPR006028
InterPro:IPR006029 InterPro:IPR006201 InterPro:IPR006202
InterPro:IPR018000 Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252
PRINTS:PR00253 PRINTS:PR01160 PROSITE:PS00236 GO:GO:0016021
GO:GO:0005886 GO:GO:0030054 GO:GO:0045211 GO:GO:0005230
GO:GO:0004890 Gene3D:2.70.170.10 PANTHER:PTHR18945 SUPFAM:SSF90112
SUPFAM:SSF63712 TIGRFAMs:TIGR00860 HGNC:HGNC:4083 ChiTaRS:GABRB3
EMBL:AC009878 EMBL:AC011196 EMBL:AC104569 EMBL:AC127511
EMBL:AC135999 EMBL:AC145167 EMBL:AC145196 EMBL:EU606048
IPI:IPI00470817 ProteinModelPortal:F5H7N0 SMR:F5H7N0
Ensembl:ENST00000541819 UCSC:uc001zbb.3 OMA:FYAIYET
ArrayExpress:F5H7N0 Bgee:F5H7N0 Uniprot:F5H7N0
Length = 529
Score = 233 (87.1 bits), Expect = 2.3e-27, Sum P(2) = 2.3e-27
Identities = 42/102 (41%), Positives = 65/102 (63%)
Query: 100 YSSLTLTFILNRQYGFYLMDFYAPSILLVCISWVSFWMAPDAVPGRTILGASTMLTFFQL 159
Y L+L+F L R G++++ Y PSIL+ +SWVSFW+ DA R LG +T+LT +
Sbjct: 286 YPRLSLSFRLKRNIGYFILQTYMPSILITILSWVSFWINYDASAARVALGITTVLTMTTI 345
Query: 160 GIETGSSLPNVSYIRSNDVWFFACTVFIFLSLAEFAFVNTIW 201
+LP + Y+++ D++ C VF+FL+L E+AFVN I+
Sbjct: 346 NTHLRETLPKIPYVKAIDMYLMGCFVFVFLALLEYAFVNYIF 387
Score = 104 (41.7 bits), Expect = 2.3e-27, Sum P(2) = 2.3e-27
Identities = 22/91 (24%), Positives = 44/91 (48%)
Query: 8 VDIGNLSFQQE----FKVQLLLQLHWKDPRLEYRHYAPHITEMVGERNFIQNIWTPHIYL 63
+DI ++ E + + + Q +W+D RL Y ++T + +W P Y
Sbjct: 123 IDIASIDMVSEVNMDYTLTMYFQQYWRDKRLAYSGIPLNLTL---DNRVADQLWVPDTYF 179
Query: 64 TNERDSLVLGLYRRDMLVSILPDGDMLFSTR 94
N++ S V G+ ++ ++ + PDG +L+ R
Sbjct: 180 LNDKKSFVHGVTVKNRMIRLHPDGTVLYGLR 210
>ZFIN|ZDB-GENE-090313-230 [details] [associations]
symbol:si:dkey-20i10.4 "si:dkey-20i10.4"
species:7955 "Danio rerio" [GO:0004890 "GABA-A receptor activity"
evidence=IEA] [GO:0005230 "extracellular ligand-gated ion channel
activity" evidence=IEA] [GO:0006811 "ion transport" evidence=IEA]
[GO:0016020 "membrane" evidence=IEA] [GO:0016021 "integral to
membrane" evidence=IEA] [GO:0005216 "ion channel activity"
evidence=IEA] [GO:0006810 "transport" evidence=IEA] [GO:0045211
"postsynaptic membrane" evidence=IEA] [GO:0030054 "cell junction"
evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0045202 "synapse" evidence=IEA] InterPro:IPR002289
InterPro:IPR006028 InterPro:IPR006029 InterPro:IPR006201
InterPro:IPR006202 InterPro:IPR018000 Pfam:PF02931 Pfam:PF02932
PRINTS:PR00252 PRINTS:PR00253 PRINTS:PR01160 PROSITE:PS00236
ZFIN:ZDB-GENE-090313-230 GO:GO:0016021 GO:GO:0005886 GO:GO:0030054
GO:GO:0045211 GO:GO:0005230 GO:GO:0004890 Gene3D:2.70.170.10
PANTHER:PTHR18945 SUPFAM:SSF90112 SUPFAM:SSF63712
TIGRFAMs:TIGR00860 GeneTree:ENSGT00630000089685 EMBL:CT025771
EMBL:CU469104 IPI:IPI00923251 ProteinModelPortal:F1QPW7
Ensembl:ENSDART00000108535 Uniprot:F1QPW7
Length = 484
Score = 231 (86.4 bits), Expect = 2.4e-27, Sum P(2) = 2.4e-27
Identities = 44/113 (38%), Positives = 70/113 (61%)
Query: 89 MLFSTRSRAYMYSSLTLTFILNRQYGFYLMDFYAPSILLVCISWVSFWMAPDAVPGRTIL 148
++F+T S Y L+L+F L R G++++ Y PS L+ +SWVSFW+ DA R L
Sbjct: 230 VVFATGS----YPRLSLSFKLKRNIGYFILQTYMPSTLITILSWVSFWINYDASAARVAL 285
Query: 149 GASTMLTFFQLGIETGSSLPNVSYIRSNDVWFFACTVFIFLSLAEFAFVNTIW 201
G +T+LT + +LP + Y+++ D++ C VF+FL+L E+AFVN I+
Sbjct: 286 GITTVLTMTTINTHLRETLPKIPYVKAIDIYLMGCFVFVFLALLEYAFVNYIF 338
Score = 104 (41.7 bits), Expect = 2.4e-27, Sum P(2) = 2.4e-27
Identities = 22/91 (24%), Positives = 43/91 (47%)
Query: 8 VDIGNLSFQQE----FKVQLLLQLHWKDPRLEYRHYAPHITEMVGERNFIQNIWTPHIYL 63
+DI ++ E + + + Q W+D RL Y ++T + +W P Y
Sbjct: 75 IDISSIDMVSEVNMDYTITMYFQQSWRDKRLSYTGIPLNLTL---DNRVADQLWVPDTYF 131
Query: 64 TNERDSLVLGLYRRDMLVSILPDGDMLFSTR 94
N++ S V G+ ++ ++ + PDG +L+ R
Sbjct: 132 INDKKSFVHGVTVKNRMIRLHPDGTVLYGLR 162
>UNIPROTKB|P08220 [details] [associations]
symbol:GABRB1 "Gamma-aminobutyric acid receptor subunit
beta-1" species:9913 "Bos taurus" [GO:0045211 "postsynaptic
membrane" evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0034707 "chloride channel complex" evidence=IEA] [GO:0030054
"cell junction" evidence=IEA] [GO:0005254 "chloride channel
activity" evidence=IEA] [GO:0005230 "extracellular ligand-gated ion
channel activity" evidence=IEA] [GO:0004890 "GABA-A receptor
activity" evidence=IEA] InterPro:IPR002289 InterPro:IPR006028
InterPro:IPR006029 InterPro:IPR006201 InterPro:IPR006202
InterPro:IPR018000 Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252
PRINTS:PR00253 PRINTS:PR01160 PROSITE:PS00236 GO:GO:0005886
GO:GO:0030054 GO:GO:0045211 GO:GO:0005230 GO:GO:0004890
Gene3D:2.70.170.10 PANTHER:PTHR18945 SUPFAM:SSF90112
SUPFAM:SSF63712 TIGRFAMs:TIGR00860 GO:GO:0034707 GO:GO:0005254
HOVERGEN:HBG051707 EMBL:X05718 IPI:IPI00718227 PIR:B27142
RefSeq:NP_776969.1 UniGene:Bt.173 ProteinModelPortal:P08220
SMR:P08220 PRIDE:P08220 Ensembl:ENSBTAT00000023711 GeneID:282239
KEGG:bta:282239 CTD:2560 eggNOG:NOG77438
GeneTree:ENSGT00630000089685 HOGENOM:HOG000231335 InParanoid:P08220
KO:K05181 OMA:YRKPMSS OrthoDB:EOG45756F BindingDB:P08220
ChEMBL:CHEMBL2848 NextBio:20806058 Uniprot:P08220
Length = 474
Score = 230 (86.0 bits), Expect = 2.8e-27, Sum P(2) = 2.8e-27
Identities = 41/102 (40%), Positives = 64/102 (62%)
Query: 100 YSSLTLTFILNRQYGFYLMDFYAPSILLVCISWVSFWMAPDAVPGRTILGASTMLTFFQL 159
Y L+L+F L R G++++ Y PS L+ +SWVSFW+ DA R LG +T+LT +
Sbjct: 230 YPRLSLSFRLKRNIGYFILQTYMPSTLITILSWVSFWINYDASAARVALGITTVLTMTTI 289
Query: 160 GIETGSSLPNVSYIRSNDVWFFACTVFIFLSLAEFAFVNTIW 201
+LP + Y+++ D++ C VF+FL+L E+AFVN I+
Sbjct: 290 STHLRETLPKIPYVKAIDIYLMGCFVFVFLALLEYAFVNYIF 331
Score = 104 (41.7 bits), Expect = 2.8e-27, Sum P(2) = 2.8e-27
Identities = 22/91 (24%), Positives = 43/91 (47%)
Query: 8 VDIGNLSFQQEFKVQLLLQLH----WKDPRLEYRHYAPHITEMVGERNFIQNIWTPHIYL 63
+D+ ++ E + L ++ WKD RL Y ++T + +W P Y
Sbjct: 67 IDVASIDMVSEVNMDYTLTMYFQQSWKDKRLSYSGIPLNLTL---DNRVADQLWVPDTYF 123
Query: 64 TNERDSLVLGLYRRDMLVSILPDGDMLFSTR 94
N++ S V G+ ++ ++ + PDG +L+ R
Sbjct: 124 LNDKKSFVHGVTVKNRMIRLHPDGTVLYGLR 154
>UNIPROTKB|P18505 [details] [associations]
symbol:GABRB1 "Gamma-aminobutyric acid receptor subunit
beta-1" species:9606 "Homo sapiens" [GO:0005230 "extracellular
ligand-gated ion channel activity" evidence=IEA] [GO:0005254
"chloride channel activity" evidence=IEA] [GO:0030054 "cell
junction" evidence=IEA] [GO:0034707 "chloride channel complex"
evidence=IEA] [GO:0004890 "GABA-A receptor activity" evidence=IEA]
[GO:0005635 "nuclear envelope" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0009636 "response to toxic substance"
evidence=IEA] [GO:0021954 "central nervous system neuron
development" evidence=IEA] [GO:0030425 "dendrite" evidence=IEA]
[GO:0032570 "response to progesterone stimulus" evidence=IEA]
[GO:0042698 "ovulation cycle" evidence=IEA] [GO:0043235 "receptor
complex" evidence=IEA] [GO:0050811 "GABA receptor binding"
evidence=IEA] [GO:0045211 "postsynaptic membrane" evidence=IEA]
[GO:0006810 "transport" evidence=TAS] [GO:0007165 "signal
transduction" evidence=TAS] [GO:0005887 "integral to plasma
membrane" evidence=TAS] [GO:0005886 "plasma membrane" evidence=TAS]
[GO:0007268 "synaptic transmission" evidence=TAS] [GO:0034220 "ion
transmembrane transport" evidence=TAS] [GO:0055085 "transmembrane
transport" evidence=TAS] Reactome:REACT_13685 Reactome:REACT_15518
InterPro:IPR002289 InterPro:IPR006028 InterPro:IPR006029
InterPro:IPR006201 InterPro:IPR006202 InterPro:IPR018000
Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252 PRINTS:PR00253
PRINTS:PR01160 PROSITE:PS00236 GO:GO:0005887 GO:GO:0007268
GO:GO:0030054 GO:GO:0045211 GO:GO:0005230 GO:GO:0004890
Gene3D:2.70.170.10 PANTHER:PTHR18945 SUPFAM:SSF90112
SUPFAM:SSF63712 TIGRFAMs:TIGR00860 GO:GO:0034220 GO:GO:0034707
GO:GO:0005254 DrugBank:DB00186 EMBL:CH471069 DrugBank:DB00683
HOVERGEN:HBG051707 DrugBank:DB00189 DrugBank:DB00690 CTD:2560
eggNOG:NOG77438 HOGENOM:HOG000231335 KO:K05181 OMA:YRKPMSS
OrthoDB:EOG45756F EMBL:X14767 EMBL:M59216 EMBL:M59212 EMBL:M59214
EMBL:M59215 EMBL:AK312720 EMBL:BC022449 EMBL:S70733 IPI:IPI00299122
PIR:A40336 RefSeq:NP_000803.2 UniGene:Hs.27283
ProteinModelPortal:P18505 SMR:P18505 IntAct:P18505 STRING:P18505
PhosphoSite:P18505 DMDM:23831128 PaxDb:P18505 PRIDE:P18505
DNASU:2560 Ensembl:ENST00000295454 GeneID:2560 KEGG:hsa:2560
UCSC:uc003gxh.3 GeneCards:GC04P046949 H-InvDB:HIX0004191
H-InvDB:HIX0164000 HGNC:HGNC:4081 HPA:HPA051297 MIM:137190
neXtProt:NX_P18505 PharmGKB:PA28495 InParanoid:P18505
PhylomeDB:P18505 BindingDB:P18505 ChEMBL:CHEMBL4558 GenomeRNAi:2560
NextBio:10111 ArrayExpress:P18505 Bgee:P18505 CleanEx:HS_GABRB1
Genevestigator:P18505 Uniprot:P18505
Length = 474
Score = 230 (86.0 bits), Expect = 2.8e-27, Sum P(2) = 2.8e-27
Identities = 41/102 (40%), Positives = 64/102 (62%)
Query: 100 YSSLTLTFILNRQYGFYLMDFYAPSILLVCISWVSFWMAPDAVPGRTILGASTMLTFFQL 159
Y L+L+F L R G++++ Y PS L+ +SWVSFW+ DA R LG +T+LT +
Sbjct: 230 YPRLSLSFRLKRNIGYFILQTYMPSTLITILSWVSFWINYDASAARVALGITTVLTMTTI 289
Query: 160 GIETGSSLPNVSYIRSNDVWFFACTVFIFLSLAEFAFVNTIW 201
+LP + Y+++ D++ C VF+FL+L E+AFVN I+
Sbjct: 290 STHLRETLPKIPYVKAIDIYLMGCFVFVFLALLEYAFVNYIF 331
Score = 104 (41.7 bits), Expect = 2.8e-27, Sum P(2) = 2.8e-27
Identities = 22/91 (24%), Positives = 43/91 (47%)
Query: 8 VDIGNLSFQQEFKVQLLLQLH----WKDPRLEYRHYAPHITEMVGERNFIQNIWTPHIYL 63
+D+ ++ E + L ++ WKD RL Y ++T + +W P Y
Sbjct: 67 IDVASIDMVSEVNMDYTLTMYFQQSWKDKRLSYSGIPLNLTL---DNRVADQLWVPDTYF 123
Query: 64 TNERDSLVLGLYRRDMLVSILPDGDMLFSTR 94
N++ S V G+ ++ ++ + PDG +L+ R
Sbjct: 124 LNDKKSFVHGVTVKNRMIRLHPDGTVLYGLR 154
>MGI|MGI:95619 [details] [associations]
symbol:Gabrb1 "gamma-aminobutyric acid (GABA) A receptor,
subunit beta 1" species:10090 "Mus musculus" [GO:0004890 "GABA-A
receptor activity" evidence=ISO] [GO:0005216 "ion channel activity"
evidence=IEA] [GO:0005230 "extracellular ligand-gated ion channel
activity" evidence=IEA] [GO:0005253 "anion channel activity"
evidence=ISO] [GO:0005254 "chloride channel activity" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISO] [GO:0005635 "nuclear envelope"
evidence=ISO] [GO:0005737 "cytoplasm" evidence=ISO] [GO:0005886
"plasma membrane" evidence=IEA] [GO:0006810 "transport"
evidence=IEA] [GO:0006811 "ion transport" evidence=IEA] [GO:0006821
"chloride transport" evidence=IEA] [GO:0009636 "response to toxic
substance" evidence=ISO] [GO:0016020 "membrane" evidence=ISO]
[GO:0016021 "integral to membrane" evidence=IEA] [GO:0030054 "cell
junction" evidence=IEA] [GO:0030425 "dendrite" evidence=ISO]
[GO:0034707 "chloride channel complex" evidence=IEA] [GO:0043235
"receptor complex" evidence=ISO] [GO:0045202 "synapse"
evidence=IEA] [GO:0045211 "postsynaptic membrane" evidence=IEA]
[GO:0050811 "GABA receptor binding" evidence=ISO]
InterPro:IPR002289 InterPro:IPR006028 InterPro:IPR006029
InterPro:IPR006201 InterPro:IPR006202 InterPro:IPR018000
Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252 PRINTS:PR00253
PRINTS:PR01160 PROSITE:PS00236 MGI:MGI:95619 GO:GO:0005886
GO:GO:0030054 GO:GO:0045211 GO:GO:0005230 GO:GO:0004890
Gene3D:2.70.170.10 PANTHER:PTHR18945 SUPFAM:SSF90112
SUPFAM:SSF63712 TIGRFAMs:TIGR00860 GO:GO:0034707 GO:GO:0005254
HOVERGEN:HBG051707 CTD:2560 eggNOG:NOG77438 HOGENOM:HOG000231335
KO:K05181 OMA:YRKPMSS OrthoDB:EOG45756F EMBL:U14418 IPI:IPI00119283
PIR:S53530 RefSeq:NP_032095.1 UniGene:Mm.38567
ProteinModelPortal:P50571 SMR:P50571 STRING:P50571
PhosphoSite:P50571 PaxDb:P50571 PRIDE:P50571
Ensembl:ENSMUST00000031122 GeneID:14400 KEGG:mmu:14400
InParanoid:P50571 BindingDB:P50571 ChEMBL:CHEMBL2839 ChiTaRS:GABRB1
NextBio:285945 Bgee:P50571 Genevestigator:P50571
GermOnline:ENSMUSG00000029212 Uniprot:P50571
Length = 474
Score = 230 (86.0 bits), Expect = 2.8e-27, Sum P(2) = 2.8e-27
Identities = 41/102 (40%), Positives = 64/102 (62%)
Query: 100 YSSLTLTFILNRQYGFYLMDFYAPSILLVCISWVSFWMAPDAVPGRTILGASTMLTFFQL 159
Y L+L+F L R G++++ Y PS L+ +SWVSFW+ DA R LG +T+LT +
Sbjct: 230 YPRLSLSFRLKRNIGYFILQTYMPSTLITILSWVSFWINYDASAARVALGITTVLTMTTI 289
Query: 160 GIETGSSLPNVSYIRSNDVWFFACTVFIFLSLAEFAFVNTIW 201
+LP + Y+++ D++ C VF+FL+L E+AFVN I+
Sbjct: 290 STHLRETLPKIPYVKAIDIYLMGCFVFVFLALLEYAFVNYIF 331
Score = 104 (41.7 bits), Expect = 2.8e-27, Sum P(2) = 2.8e-27
Identities = 22/91 (24%), Positives = 43/91 (47%)
Query: 8 VDIGNLSFQQEFKVQLLLQLH----WKDPRLEYRHYAPHITEMVGERNFIQNIWTPHIYL 63
+D+ ++ E + L ++ WKD RL Y ++T + +W P Y
Sbjct: 67 IDVASIDMVSEVNMDYTLTMYFQQSWKDKRLSYSGIPLNLTL---DNRVADQLWVPDTYF 123
Query: 64 TNERDSLVLGLYRRDMLVSILPDGDMLFSTR 94
N++ S V G+ ++ ++ + PDG +L+ R
Sbjct: 124 LNDKKSFVHGVTVKNRMIRLHPDGTVLYGLR 154
>RGD|2649 [details] [associations]
symbol:Gabrb1 "gamma-aminobutyric acid (GABA) A receptor, beta 1"
species:10116 "Rattus norvegicus" [GO:0004890 "GABA-A receptor
activity" evidence=IDA] [GO:0005230 "extracellular ligand-gated ion
channel activity" evidence=IEA] [GO:0005253 "anion channel activity"
evidence=IDA] [GO:0005254 "chloride channel activity" evidence=IEA]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005635 "nuclear envelope"
evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA] [GO:0005886
"plasma membrane" evidence=IEA] [GO:0006821 "chloride transport"
evidence=TAS] [GO:0007214 "gamma-aminobutyric acid signaling pathway"
evidence=TAS] [GO:0009636 "response to toxic substance" evidence=IDA]
[GO:0015276 "ligand-gated ion channel activity" evidence=TAS]
[GO:0016020 "membrane" evidence=IDA] [GO:0021954 "central nervous
system neuron development" evidence=IEP] [GO:0030054 "cell junction"
evidence=IEA] [GO:0030425 "dendrite" evidence=IDA] [GO:0032570
"response to progesterone stimulus" evidence=IEP] [GO:0034707
"chloride channel complex" evidence=IEA] [GO:0042698 "ovulation
cycle" evidence=IEP] [GO:0043235 "receptor complex" evidence=IDA]
[GO:0045211 "postsynaptic membrane" evidence=IEA] [GO:0050811 "GABA
receptor binding" evidence=IPI] InterPro:IPR002289 InterPro:IPR006028
InterPro:IPR006029 InterPro:IPR006201 InterPro:IPR006202
InterPro:IPR018000 Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252
PRINTS:PR00253 PRINTS:PR01160 PROSITE:PS00236 RGD:2649 GO:GO:0005886
GO:GO:0005737 GO:GO:0005635 GO:GO:0016020 GO:GO:0009636 GO:GO:0030054
GO:GO:0045211 GO:GO:0005230 GO:GO:0004890 Gene3D:2.70.170.10
PANTHER:PTHR18945 SUPFAM:SSF90112 SUPFAM:SSF63712 TIGRFAMs:TIGR00860
GO:GO:0007214 GO:GO:0030425 GO:GO:0015276 GO:GO:0043235 GO:GO:0032570
GO:GO:0042698 GO:GO:0005253 GO:GO:0034707 GO:GO:0005254 GO:GO:0021954
GO:GO:0006821 HOVERGEN:HBG051707 CTD:2560 eggNOG:NOG77438
GeneTree:ENSGT00630000089685 HOGENOM:HOG000231335 KO:K05181
OMA:YRKPMSS OrthoDB:EOG45756F EMBL:X15466 IPI:IPI00209268 PIR:S04464
RefSeq:NP_037088.1 UniGene:Rn.207157 ProteinModelPortal:P15431
SMR:P15431 IntAct:P15431 TCDB:1.A.9.5.1 PhosphoSite:P15431
PRIDE:P15431 Ensembl:ENSRNOT00000003170 GeneID:25450 KEGG:rno:25450
UCSC:RGD:2649 InParanoid:P15431 BindingDB:P15431 ChEMBL:CHEMBL334
NextBio:606697 Genevestigator:P15431 GermOnline:ENSRNOG00000002327
Uniprot:P15431
Length = 474
Score = 230 (86.0 bits), Expect = 2.8e-27, Sum P(2) = 2.8e-27
Identities = 41/102 (40%), Positives = 64/102 (62%)
Query: 100 YSSLTLTFILNRQYGFYLMDFYAPSILLVCISWVSFWMAPDAVPGRTILGASTMLTFFQL 159
Y L+L+F L R G++++ Y PS L+ +SWVSFW+ DA R LG +T+LT +
Sbjct: 230 YPRLSLSFRLKRNIGYFILQTYMPSTLITILSWVSFWINYDASAARVALGITTVLTMTTI 289
Query: 160 GIETGSSLPNVSYIRSNDVWFFACTVFIFLSLAEFAFVNTIW 201
+LP + Y+++ D++ C VF+FL+L E+AFVN I+
Sbjct: 290 STHLRETLPKIPYVKAIDIYLMGCFVFVFLALLEYAFVNYIF 331
Score = 104 (41.7 bits), Expect = 2.8e-27, Sum P(2) = 2.8e-27
Identities = 22/91 (24%), Positives = 43/91 (47%)
Query: 8 VDIGNLSFQQEFKVQLLLQLH----WKDPRLEYRHYAPHITEMVGERNFIQNIWTPHIYL 63
+D+ ++ E + L ++ WKD RL Y ++T + +W P Y
Sbjct: 67 IDVASIDMVSEVNMDYTLTMYFQQSWKDKRLSYSGIPLNLTL---DNRVADQLWVPDTYF 123
Query: 64 TNERDSLVLGLYRRDMLVSILPDGDMLFSTR 94
N++ S V G+ ++ ++ + PDG +L+ R
Sbjct: 124 LNDKKSFVHGVTVKNRMIRLHPDGTVLYGLR 154
>ZFIN|ZDB-GENE-010410-2 [details] [associations]
symbol:glrba "gylcine receptor, beta a" species:7955
"Danio rerio" [GO:0016934 "extracellular-glycine-gated chloride
channel activity" evidence=IEA] [GO:0005230 "extracellular
ligand-gated ion channel activity" evidence=IEA] [GO:0006811 "ion
transport" evidence=IEA] [GO:0006821 "chloride transport"
evidence=IEA] [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0045211 "postsynaptic membrane" evidence=IEA] [GO:0016020
"membrane" evidence=IEA] [GO:0006810 "transport" evidence=IEA]
InterPro:IPR006029 InterPro:IPR006201 InterPro:IPR006202
InterPro:IPR008060 InterPro:IPR018000 Pfam:PF02931 Pfam:PF02932
PRINTS:PR00252 PRINTS:PR01677 PROSITE:PS00236
ZFIN:ZDB-GENE-010410-2 GO:GO:0016021 GO:GO:0045211
Gene3D:2.70.170.10 PANTHER:PTHR18945 SUPFAM:SSF90112
SUPFAM:SSF63712 TIGRFAMs:TIGR00860 GO:GO:0016934 HOVERGEN:HBG051707
GeneTree:ENSGT00550000074453 HOGENOM:HOG000231336 OrthoDB:EOG4HMJ97
PANTHER:PTHR18945:SF29 EMBL:BX284619 EMBL:CU075714 EMBL:AJ404971
IPI:IPI00492685 RefSeq:NP_571856.1 UniGene:Dr.7438
Ensembl:ENSDART00000102790 GeneID:83412 KEGG:dre:83412 CTD:83412
eggNOG:KOG3644 InParanoid:Q9DES8 OMA:GGTPIHV NextBio:20934181
Uniprot:Q9DES8
Length = 498
Score = 231 (86.4 bits), Expect = 4.6e-27, Sum P(2) = 4.6e-27
Identities = 42/101 (41%), Positives = 63/101 (62%)
Query: 100 YSSLTLTFILNRQYGFYLMDFYAPSILLVCISWVSFWMAPDAVPGRTILGASTMLTFFQL 159
Y+ + + F L RQ GFY+M YAP++L+V +SW+SFW+ PDA R LG ++L+
Sbjct: 252 YTCVEVIFTLRRQVGFYMMGVYAPTLLIVVLSWLSFWINPDASAARVPLGILSVLSLSSE 311
Query: 160 GIETGSSLPNVSYIRSNDVWFFACTVFIFLSLAEFAFVNTI 200
S LP VSY+++ D+W AC ++ F SL E+A V +
Sbjct: 312 CTSLASELPKVSYVKAIDIWMIACLLYGFASLVEYAVVQVM 352
Score = 102 (41.0 bits), Expect = 4.6e-27, Sum P(2) = 4.6e-27
Identities = 26/97 (26%), Positives = 48/97 (49%)
Query: 18 EFKVQLLLQLHWKDPRLEYRHYAPHITEMVGERNFIQNIWTPHIYLTNERDSLVLGLYRR 77
+++V + L+ W DPRL V + F Q +W P ++ NE+++ + +
Sbjct: 100 DYRVNIFLRQRWNDPRLRLPTDFKSDALTVDPKMF-QCLWKPDLFFANEKNANFHDVTQE 158
Query: 78 DMLVSILPDGDMLFSTRSRAYMYSSLTLT-FILNRQY 113
++L+ I +GD+L S R + L L F ++ QY
Sbjct: 159 NILLFIFRNGDVLISMRLSVTLSCPLALQLFPMDTQY 195
>UNIPROTKB|Q90590 [details] [associations]
symbol:GABARB "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0004890 "GABA-A receptor activity"
evidence=IEA] [GO:0005230 "extracellular ligand-gated ion channel
activity" evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0016021 "integral to membrane" evidence=IEA] [GO:0030054 "cell
junction" evidence=IEA] [GO:0045211 "postsynaptic membrane"
evidence=IEA] InterPro:IPR002289 InterPro:IPR006028
InterPro:IPR006029 InterPro:IPR006201 InterPro:IPR006202
InterPro:IPR018000 Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252
PRINTS:PR00253 PRINTS:PR01160 PROSITE:PS00236 GO:GO:0016021
GO:GO:0005886 GO:GO:0030054 GO:GO:0045211 GO:GO:0005230
GO:GO:0004890 Gene3D:2.70.170.10 PANTHER:PTHR18945 SUPFAM:SSF90112
SUPFAM:SSF63712 TIGRFAMs:TIGR00860 HOVERGEN:HBG051707
eggNOG:NOG77438 GeneTree:ENSGT00630000089685 HOGENOM:HOG000231335
OrthoDB:EOG45756F HSSP:P23415 EMBL:AADN02035869 EMBL:AADN02035870
EMBL:AADN02035871 EMBL:AADN02035872 EMBL:AADN02035873
EMBL:AADN02035874 EMBL:X72806 IPI:IPI00594639 PIR:JH0828
UniGene:Gga.734 Ensembl:ENSGALT00000002584 Uniprot:Q90590
Length = 430
Score = 227 (85.0 bits), Expect = 5.3e-27, Sum P(2) = 5.3e-27
Identities = 43/114 (37%), Positives = 71/114 (62%)
Query: 88 DMLFSTRSRAYMYSSLTLTFILNRQYGFYLMDFYAPSILLVCISWVSFWMAPDAVPGRTI 147
+++FST + Y L+L+F L R G++++ Y PSIL+ +SWVSFW+ DA R
Sbjct: 221 NVVFSTGA----YPRLSLSFKLKRNIGYFILQTYMPSILITILSWVSFWINYDASAARVA 276
Query: 148 LGASTMLTFFQLGIETGSSLPNVSYIRSNDVWFFACTVFIFLSLAEFAFVNTIW 201
LG +T+LT + +LP + Y+++ D++ C VF+F++L E+A VN I+
Sbjct: 277 LGITTVLTMTTINTHLRETLPKIPYVKAIDMYLMGCFVFVFMALLEYALVNYIF 330
Score = 102 (41.0 bits), Expect = 5.3e-27, Sum P(2) = 5.3e-27
Identities = 22/91 (24%), Positives = 43/91 (47%)
Query: 8 VDIGNLSFQQEFKVQLLLQLH----WKDPRLEYRHYAPHITEMVGERNFIQNIWTPHIYL 63
+DI ++ E + L ++ W+D RL Y ++T + +W P Y
Sbjct: 66 IDIASIDMVSEVNMDYTLTMYFQQAWRDKRLSYNVIPLNLTL---DNRVADQLWVPDTYF 122
Query: 64 TNERDSLVLGLYRRDMLVSILPDGDMLFSTR 94
N++ S V G+ ++ ++ + PDG +L+ R
Sbjct: 123 LNDKKSFVHGVTVKNRMIRLHPDGTVLYGLR 153
>ZFIN|ZDB-GENE-040801-106 [details] [associations]
symbol:glrbb "glycine receptor, beta b"
species:7955 "Danio rerio" [GO:0016934 "extracellular-glycine-gated
chloride channel activity" evidence=IEA;IMP] [GO:0005230
"extracellular ligand-gated ion channel activity" evidence=IEA]
[GO:0006811 "ion transport" evidence=IEA] [GO:0016020 "membrane"
evidence=IEA] [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0045211 "postsynaptic membrane" evidence=IEA] [GO:0006821
"chloride transport" evidence=IEA] [GO:0006810 "transport"
evidence=IEA] [GO:0030054 "cell junction" evidence=IEA] [GO:0005886
"plasma membrane" evidence=IEA] [GO:0045202 "synapse" evidence=IEA]
[GO:0034613 "cellular protein localization" evidence=IMP]
InterPro:IPR006029 InterPro:IPR006201 InterPro:IPR006202
InterPro:IPR008060 InterPro:IPR018000 Pfam:PF02931 Pfam:PF02932
PRINTS:PR00252 PRINTS:PR01677 PROSITE:PS00236
ZFIN:ZDB-GENE-040801-106 GO:GO:0016021 GO:GO:0034613 GO:GO:0045211
Gene3D:2.70.170.10 PANTHER:PTHR18945 SUPFAM:SSF90112
SUPFAM:SSF63712 TIGRFAMs:TIGR00860 GO:GO:0016934 HOVERGEN:HBG051707
GeneTree:ENSGT00550000074453 HOGENOM:HOG000231336 eggNOG:NOG295166
KO:K05196 OrthoDB:EOG4HMJ97 PANTHER:PTHR18945:SF29 EMBL:CR456621
EMBL:BC078269 EMBL:AB195560 IPI:IPI00486645 RefSeq:NP_001003587.1
UniGene:Dr.83354 SMR:Q6DC22 STRING:Q6DC22
Ensembl:ENSDART00000074685 GeneID:445193 KEGG:dre:445193 CTD:445193
InParanoid:Q6DC22 OMA:QHARITE NextBio:20831954 Uniprot:Q6DC22
Length = 494
Score = 234 (87.4 bits), Expect = 5.3e-27, Sum P(2) = 5.3e-27
Identities = 43/101 (42%), Positives = 63/101 (62%)
Query: 100 YSSLTLTFILNRQYGFYLMDFYAPSILLVCISWVSFWMAPDAVPGRTILGASTMLTFFQL 159
Y+ + + F L RQ GFY+M YAP++L+V +SW+SFW+ PDA R LG ++L+
Sbjct: 252 YTCVEVIFTLRRQVGFYMMGVYAPTLLIVVLSWLSFWINPDASAARVPLGILSVLSLSSE 311
Query: 160 GIETGSSLPNVSYIRSNDVWFFACTVFIFLSLAEFAFVNTI 200
S LP VSY+++ D+W AC +F F SL E+A V +
Sbjct: 312 CTSLASELPKVSYVKAIDIWLIACLLFGFASLVEYAVVQVM 352
Score = 98 (39.6 bits), Expect = 5.3e-27, Sum P(2) = 5.3e-27
Identities = 25/96 (26%), Positives = 48/96 (50%)
Query: 18 EFKVQLLLQLHWKDPRLEYRHYAPHITEMVGERNFIQNIWTPHIYLTNERDSLVLGLYRR 77
+++V + L+ W DPRL + V + F + +W P ++ NE+ + + +
Sbjct: 100 DYRVNIFLRQRWNDPRLRLPQDFKSDSLTVDPKMF-KCLWKPDLFFANEKSANFHDVTQE 158
Query: 78 DMLVSILPDGDMLFSTRSRAYMYSSLTLT-FILNRQ 112
++L+ I +GD+L S R + L LT F ++ Q
Sbjct: 159 NILLFIFRNGDVLISMRLSVTLSCPLDLTLFPMDTQ 194
>UNIPROTKB|P0C2W5 [details] [associations]
symbol:GABRB2 "Gamma-aminobutyric acid receptor subunit
beta-2" species:9913 "Bos taurus" [GO:0045211 "postsynaptic
membrane" evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0034707 "chloride channel complex" evidence=IEA] [GO:0030054
"cell junction" evidence=IEA] [GO:0005254 "chloride channel
activity" evidence=IEA] [GO:0005230 "extracellular ligand-gated ion
channel activity" evidence=IEA] [GO:0004890 "GABA-A receptor
activity" evidence=IEA] InterPro:IPR002289 InterPro:IPR006028
InterPro:IPR006029 InterPro:IPR006201 InterPro:IPR006202
InterPro:IPR018000 Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252
PRINTS:PR00253 PRINTS:PR01160 PROSITE:PS00236 GO:GO:0005886
GO:GO:0030054 GO:GO:0045211 GO:GO:0005230 GO:GO:0004890
Gene3D:2.70.170.10 PANTHER:PTHR18945 SUPFAM:SSF90112
SUPFAM:SSF63712 TIGRFAMs:TIGR00860 GO:GO:0034707 GO:GO:0005254
HOVERGEN:HBG051707 eggNOG:NOG77438 IPI:IPI00823907 UniGene:Bt.63930
ProteinModelPortal:P0C2W5 SMR:P0C2W5 STRING:P0C2W5 Uniprot:P0C2W5
Length = 472
Score = 229 (85.7 bits), Expect = 5.7e-27, Sum P(2) = 5.7e-27
Identities = 44/113 (38%), Positives = 70/113 (61%)
Query: 89 MLFSTRSRAYMYSSLTLTFILNRQYGFYLMDFYAPSILLVCISWVSFWMAPDAVPGRTIL 148
++FST S Y L+L+F L R G++++ Y PSIL+ +SWVSFW+ DA R L
Sbjct: 220 VVFSTGS----YPRLSLSFKLKRNIGYFILQTYMPSILITILSWVSFWINYDASAARVAL 275
Query: 149 GASTMLTFFQLGIETGSSLPNVSYIRSNDVWFFACTVFIFLSLAEFAFVNTIW 201
G +T+LT + +LP + Y+++ D++ C VF+F++L E+A VN I+
Sbjct: 276 GITTVLTMTTINTHLRETLPKIPYVKAIDMYLMGCFVFVFMALLEYALVNYIF 328
Score = 102 (41.0 bits), Expect = 5.7e-27, Sum P(2) = 5.7e-27
Identities = 22/91 (24%), Positives = 43/91 (47%)
Query: 8 VDIGNLSFQQEFKVQLLLQLH----WKDPRLEYRHYAPHITEMVGERNFIQNIWTPHIYL 63
+DI ++ E + L ++ W+D RL Y ++T + +W P Y
Sbjct: 64 IDIASIDMVSEVNMDYTLTMYFQQAWRDKRLSYNVIPLNLTL---DNRVADQLWVPDTYF 120
Query: 64 TNERDSLVLGLYRRDMLVSILPDGDMLFSTR 94
N++ S V G+ ++ ++ + PDG +L+ R
Sbjct: 121 LNDKKSFVHGVTVKNRMIRLHPDGTVLYGLR 151
>UNIPROTKB|L7N0C0 [details] [associations]
symbol:GABRB2 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0045211 "postsynaptic membrane" evidence=IEA]
[GO:0016021 "integral to membrane" evidence=IEA] [GO:0005230
"extracellular ligand-gated ion channel activity" evidence=IEA]
[GO:0004890 "GABA-A receptor activity" evidence=IEA]
GeneTree:ENSGT00630000089685 EMBL:AAEX03003043
Ensembl:ENSCAFT00000015972 Uniprot:L7N0C0
Length = 474
Score = 229 (85.7 bits), Expect = 5.8e-27, Sum P(2) = 5.8e-27
Identities = 44/113 (38%), Positives = 70/113 (61%)
Query: 89 MLFSTRSRAYMYSSLTLTFILNRQYGFYLMDFYAPSILLVCISWVSFWMAPDAVPGRTIL 148
++FST S Y L+L+F L R G++++ Y PSIL+ +SWVSFW+ DA R L
Sbjct: 222 VVFSTGS----YPRLSLSFKLKRNIGYFILQTYMPSILITILSWVSFWINYDASAARVAL 277
Query: 149 GASTMLTFFQLGIETGSSLPNVSYIRSNDVWFFACTVFIFLSLAEFAFVNTIW 201
G +T+LT + +LP + Y+++ D++ C VF+F++L E+A VN I+
Sbjct: 278 GITTVLTMTTINTHLRETLPKIPYVKAIDMYLMGCFVFVFMALLEYALVNYIF 330
Score = 102 (41.0 bits), Expect = 5.8e-27, Sum P(2) = 5.8e-27
Identities = 22/91 (24%), Positives = 43/91 (47%)
Query: 8 VDIGNLSFQQEFKVQLLLQLH----WKDPRLEYRHYAPHITEMVGERNFIQNIWTPHIYL 63
+DI ++ E + L ++ W+D RL Y ++T + +W P Y
Sbjct: 66 IDIASIDMVSEVNMDYTLTMYFQQAWRDKRLSYNVIPLNLTL---DNRVADQLWVPDTYF 122
Query: 64 TNERDSLVLGLYRRDMLVSILPDGDMLFSTR 94
N++ S V G+ ++ ++ + PDG +L+ R
Sbjct: 123 LNDKKSFVHGVTVKNRMIRLHPDGTVLYGLR 153
>RGD|2650 [details] [associations]
symbol:Gabrb2 "gamma-aminobutyric acid (GABA) A receptor, beta 2"
species:10116 "Rattus norvegicus" [GO:0004890 "GABA-A receptor
activity" evidence=IMP;TAS] [GO:0005237 "inhibitory extracellular
ligand-gated ion channel activity" evidence=IMP] [GO:0005254
"chloride channel activity" evidence=IEA] [GO:0005515 "protein
binding" evidence=IPI] [GO:0005829 "cytosol" evidence=IDA]
[GO:0005886 "plasma membrane" evidence=IEA] [GO:0007214
"gamma-aminobutyric acid signaling pathway" evidence=TAS] [GO:0007605
"sensory perception of sound" evidence=IEA;ISO] [GO:0016020
"membrane" evidence=IDA] [GO:0030054 "cell junction" evidence=IEA]
[GO:0034707 "chloride channel complex" evidence=IEA] [GO:0045211
"postsynaptic membrane" evidence=IEA] [GO:0048666 "neuron
development" evidence=ISO] [GO:0051932 "synaptic transmission,
GABAergic" evidence=IDA] [GO:0060119 "inner ear receptor cell
development" evidence=IEA;ISO] [GO:0060384 "innervation"
evidence=IEA;ISO] [GO:0090102 "cochlea development" evidence=IEA;ISO]
InterPro:IPR002289 InterPro:IPR006028 InterPro:IPR006029
InterPro:IPR006201 InterPro:IPR006202 InterPro:IPR018000 Pfam:PF02931
Pfam:PF02932 PRINTS:PR00252 PRINTS:PR00253 PRINTS:PR01160
PROSITE:PS00236 RGD:2650 GO:GO:0005829 GO:GO:0005886 GO:GO:0016020
GO:GO:0030054 GO:GO:0045211 GO:GO:0004890 Gene3D:2.70.170.10
PANTHER:PTHR18945 SUPFAM:SSF90112 SUPFAM:SSF63712 TIGRFAMs:TIGR00860
GO:GO:0007214 GO:GO:0007605 GO:GO:0034707 GO:GO:0005254 GO:GO:0090102
GO:GO:0051932 GO:GO:0060119 HOVERGEN:HBG051707 GO:GO:0005237
GO:GO:0060384 eggNOG:NOG77438 GeneTree:ENSGT00630000089685
HOGENOM:HOG000231335 KO:K05181 OrthoDB:EOG45756F CTD:2561 OMA:TSSIQYR
EMBL:X15467 EMBL:AY574251 IPI:IPI00209269 PIR:S04465
RefSeq:NP_037089.1 UniGene:Rn.207158 ProteinModelPortal:P63138
SMR:P63138 IntAct:P63138 STRING:P63138 PhosphoSite:P63138
PRIDE:P63138 Ensembl:ENSRNOT00000004970 GeneID:25451 KEGG:rno:25451
UCSC:RGD:2650 InParanoid:P63138 BindingDB:P63138 ChEMBL:CHEMBL295
NextBio:606701 Genevestigator:P63138 GermOnline:ENSRNOG00000003680
Uniprot:P63138
Length = 474
Score = 229 (85.7 bits), Expect = 5.8e-27, Sum P(2) = 5.8e-27
Identities = 44/113 (38%), Positives = 70/113 (61%)
Query: 89 MLFSTRSRAYMYSSLTLTFILNRQYGFYLMDFYAPSILLVCISWVSFWMAPDAVPGRTIL 148
++FST S Y L+L+F L R G++++ Y PSIL+ +SWVSFW+ DA R L
Sbjct: 222 VVFSTGS----YPRLSLSFKLKRNIGYFILQTYMPSILITILSWVSFWINYDASAARVAL 277
Query: 149 GASTMLTFFQLGIETGSSLPNVSYIRSNDVWFFACTVFIFLSLAEFAFVNTIW 201
G +T+LT + +LP + Y+++ D++ C VF+F++L E+A VN I+
Sbjct: 278 GITTVLTMTTINTHLRETLPKIPYVKAIDMYLMGCFVFVFMALLEYALVNYIF 330
Score = 102 (41.0 bits), Expect = 5.8e-27, Sum P(2) = 5.8e-27
Identities = 22/91 (24%), Positives = 43/91 (47%)
Query: 8 VDIGNLSFQQEFKVQLLLQLH----WKDPRLEYRHYAPHITEMVGERNFIQNIWTPHIYL 63
+DI ++ E + L ++ W+D RL Y ++T + +W P Y
Sbjct: 66 IDIASIDMVSEVNMDYTLTMYFQQAWRDKRLSYNVIPLNLTL---DNRVADQLWVPDTYF 122
Query: 64 TNERDSLVLGLYRRDMLVSILPDGDMLFSTR 94
N++ S V G+ ++ ++ + PDG +L+ R
Sbjct: 123 LNDKKSFVHGVTVKNRMIRLHPDGTVLYGLR 153
>UNIPROTKB|F1MDL0 [details] [associations]
symbol:GLRB "Glycine receptor subunit beta" species:9913
"Bos taurus" [GO:0060013 "righting reflex" evidence=IEA]
[GO:0060012 "synaptic transmission, glycinergic" evidence=IEA]
[GO:0042391 "regulation of membrane potential" evidence=IEA]
[GO:0016934 "extracellular-glycine-gated chloride channel activity"
evidence=IEA] [GO:0016594 "glycine binding" evidence=IEA]
[GO:0007628 "adult walking behavior" evidence=IEA] [GO:0007601
"visual perception" evidence=IEA] [GO:0007399 "nervous system
development" evidence=IEA] [GO:0007340 "acrosome reaction"
evidence=IEA] [GO:0007218 "neuropeptide signaling pathway"
evidence=IEA] [GO:0001964 "startle response" evidence=IEA]
[GO:0016021 "integral to membrane" evidence=IEA] [GO:0045211
"postsynaptic membrane" evidence=IEA] InterPro:IPR006029
InterPro:IPR006201 InterPro:IPR006202 InterPro:IPR008060
InterPro:IPR018000 Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252
PRINTS:PR01677 PROSITE:PS00236 GO:GO:0016021 GO:GO:0007399
GO:GO:0045211 Gene3D:2.70.170.10 PANTHER:PTHR18945 SUPFAM:SSF90112
SUPFAM:SSF63712 TIGRFAMs:TIGR00860 GO:GO:0007218 GO:GO:0007601
GO:GO:0042391 GO:GO:0016934 GO:GO:0007340 GO:GO:0060013
GO:GO:0007628 GO:GO:0001964 GeneTree:ENSGT00550000074453
GO:GO:0016594 GO:GO:0060012 PANTHER:PTHR18945:SF29 OMA:PTMFKCL
EMBL:DAAA02044907 EMBL:DAAA02044902 EMBL:DAAA02044903
EMBL:DAAA02044904 EMBL:DAAA02044905 EMBL:DAAA02044906
IPI:IPI01028074 Ensembl:ENSBTAT00000029010 Uniprot:F1MDL0
Length = 497
Score = 232 (86.7 bits), Expect = 7.2e-27, Sum P(2) = 7.2e-27
Identities = 43/103 (41%), Positives = 64/103 (62%)
Query: 98 YMYSSLTLTFILNRQYGFYLMDFYAPSILLVCISWVSFWMAPDAVPGRTILGASTMLTFF 157
+ Y+ + + F L RQ GFY+M YAP++L+V +SW+SFW+ PDA R LG ++L+
Sbjct: 251 WYYTCVEVIFTLRRQVGFYMMGVYAPTLLIVVLSWLSFWINPDASAARVPLGIFSVLSLA 310
Query: 158 QLGIETGSSLPNVSYIRSNDVWFFACTVFIFLSLAEFAFVNTI 200
+ LP VSY+++ DVW AC +F F SL E+A V +
Sbjct: 311 SECTTLAAELPKVSYVKALDVWLIACLLFGFASLVEYAVVQVM 353
Score = 99 (39.9 bits), Expect = 7.2e-27, Sum P(2) = 7.2e-27
Identities = 24/96 (25%), Positives = 47/96 (48%)
Query: 18 EFKVQLLLQLHWKDPRLEYRHYAPHITEMVGERNFIQNIWTPHIYLTNERDSLVLGLYRR 77
+++V + L+ W DPRL+ + + + +W P ++ NE+ + + +
Sbjct: 100 DYRVNIFLRQKWNDPRLKLPSDFRGSDALTVDPTMYKCLWKPDLFFANEKSANFHDVTQE 159
Query: 78 DMLVSILPDGDMLFSTRSRAYMYSSLTLT-FILNRQ 112
++L+ I DGD+L S R + L LT F ++ Q
Sbjct: 160 NILLFIFRDGDVLVSMRLSITLSCPLDLTLFPMDTQ 195
>UNIPROTKB|F1NHG7 [details] [associations]
symbol:GABRR3 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0005230 "extracellular ligand-gated ion channel
activity" evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0016021 "integral to membrane" evidence=IEA] [GO:0030054 "cell
junction" evidence=IEA] [GO:0045211 "postsynaptic membrane"
evidence=IEA] InterPro:IPR006028 InterPro:IPR006029
InterPro:IPR006201 InterPro:IPR006202 InterPro:IPR018000
Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252 PRINTS:PR00253
PROSITE:PS00236 GO:GO:0016021 GO:GO:0005886 GO:GO:0030054
GO:GO:0045211 GO:GO:0005230 Gene3D:2.70.170.10 PANTHER:PTHR18945
SUPFAM:SSF90112 SUPFAM:SSF63712 TIGRFAMs:TIGR00860
GeneTree:ENSGT00630000089571 EMBL:AADN02032647 EMBL:AADN02032648
EMBL:AADN02032649 EMBL:AADN02032650 EMBL:AADN02032651
IPI:IPI00576866 Ensembl:ENSGALT00000023288 OMA:ASGMYNI
Uniprot:F1NHG7
Length = 427
Score = 215 (80.7 bits), Expect = 8.2e-27, Sum P(2) = 8.2e-27
Identities = 43/104 (41%), Positives = 66/104 (63%)
Query: 95 SRAYMYSSLTLTFILNRQYGFYLMDFYAPSILLVCISWVSFWMAPDAVPGRTILGASTML 154
S A Y+ L + F L R F+++ Y P++L+V +SWVSFW+ AVP R LG +T+L
Sbjct: 208 STAGWYNRLFINFALRRHIFFFVLQSYFPAMLMVMLSWVSFWIDRRAVPARVSLGITTVL 267
Query: 155 TFFQLGIETGSSLPNVSYIRSNDVWFFACTVFIFLSLAEFAFVN 198
T + +S+P VSYI++ DV+ + +F+FLS+ E+A VN
Sbjct: 268 TMSTIITGVSASMPQVSYIKAVDVYLWISFLFVFLSVIEYAAVN 311
Score = 113 (44.8 bits), Expect = 8.2e-27, Sum P(2) = 8.2e-27
Identities = 22/77 (28%), Positives = 42/77 (54%)
Query: 18 EFKVQLLLQLHWKDPRLEYRHYAPHITEMVGERNFIQNIWTPHIYLTNERDSLVLGLYRR 77
+F + L L+ +WKD RL +R + M + I+ IW P ++ + + S +
Sbjct: 60 DFTMTLYLRHYWKDERLSFR--STKNKSMTFDGRLIKKIWVPDVFFVHSKRSFIHDTTVE 117
Query: 78 DMLVSILPDGDMLFSTR 94
++++ + PDG++LFS R
Sbjct: 118 NVMLRVYPDGNVLFSLR 134
>UNIPROTKB|P47870 [details] [associations]
symbol:GABRB2 "Gamma-aminobutyric acid receptor subunit
beta-2" species:9606 "Homo sapiens" [GO:0005254 "chloride channel
activity" evidence=IEA] [GO:0030054 "cell junction" evidence=IEA]
[GO:0034707 "chloride channel complex" evidence=IEA] [GO:0060119
"inner ear receptor cell development" evidence=IEA] [GO:0060384
"innervation" evidence=IEA] [GO:0090102 "cochlea development"
evidence=IEA] [GO:0005237 "inhibitory extracellular ligand-gated
ion channel activity" evidence=IEA] [GO:0005829 "cytosol"
evidence=IEA] [GO:0007605 "sensory perception of sound"
evidence=IEA] [GO:0045211 "postsynaptic membrane" evidence=IEA]
[GO:0005887 "integral to plasma membrane" evidence=TAS] [GO:0006810
"transport" evidence=TAS] [GO:0007214 "gamma-aminobutyric acid
signaling pathway" evidence=TAS] [GO:0005886 "plasma membrane"
evidence=TAS] [GO:0007268 "synaptic transmission" evidence=TAS]
[GO:0034220 "ion transmembrane transport" evidence=TAS] [GO:0055085
"transmembrane transport" evidence=TAS] [GO:0051932 "synaptic
transmission, GABAergic" evidence=ISS] [GO:0004890 "GABA-A receptor
activity" evidence=ISS] Reactome:REACT_13685 Reactome:REACT_15518
InterPro:IPR002289 InterPro:IPR006028 InterPro:IPR006029
InterPro:IPR006201 InterPro:IPR006202 InterPro:IPR018000
Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252 PRINTS:PR00253
PRINTS:PR01160 PROSITE:PS00236 GO:GO:0005829 GO:GO:0005887
EMBL:CH471062 GO:GO:0030054 GO:GO:0045211 GO:GO:0004890
Gene3D:2.70.170.10 PANTHER:PTHR18945 SUPFAM:SSF90112
SUPFAM:SSF63712 TIGRFAMs:TIGR00860 GO:GO:0034220 GO:GO:0007214
GO:GO:0007605 GO:GO:0034707 GO:GO:0005254 DrugBank:DB00186
GO:GO:0090102 GO:GO:0051932 DrugBank:DB00683 GO:GO:0060119
HOVERGEN:HBG051707 DrugBank:DB00189 DrugBank:DB00690 GO:GO:0005237
TCDB:1.A.9.5.2 GO:GO:0060384 eggNOG:NOG77438 KO:K05181
OrthoDB:EOG45756F EMBL:S67368 EMBL:S77554 EMBL:S77553 EMBL:GU086163
EMBL:GU086164 EMBL:AK289730 EMBL:AK289815 EMBL:BC099705
EMBL:BC099719 EMBL:BC105639 IPI:IPI00026639 IPI:IPI00216394
IPI:IPI00954901 IPI:IPI00955985 PIR:I52656 RefSeq:NP_000804.1
RefSeq:NP_068711.1 UniGene:Hs.303527 ProteinModelPortal:P47870
SMR:P47870 MINT:MINT-268409 STRING:P47870 PhosphoSite:P47870
DMDM:292495010 PaxDb:P47870 PeptideAtlas:P47870 PRIDE:P47870
Ensembl:ENST00000274547 Ensembl:ENST00000353437
Ensembl:ENST00000393959 Ensembl:ENST00000520240 GeneID:2561
KEGG:hsa:2561 UCSC:uc003lyr.1 UCSC:uc003lys.1 UCSC:uc021yhg.1
CTD:2561 GeneCards:GC05M160715 HGNC:HGNC:4082 HPA:CAB001964
MIM:600232 neXtProt:NX_P47870 PharmGKB:PA28496 OMA:TSSIQYR
PhylomeDB:P47870 BindingDB:P47870 ChEMBL:CHEMBL1920 GenomeRNAi:2561
NextBio:10115 ArrayExpress:P47870 Bgee:P47870 CleanEx:HS_GABRB2
Genevestigator:P47870 GermOnline:ENSG00000145864 Uniprot:P47870
Length = 512
Score = 229 (85.7 bits), Expect = 8.8e-27, Sum P(2) = 8.8e-27
Identities = 44/113 (38%), Positives = 70/113 (61%)
Query: 89 MLFSTRSRAYMYSSLTLTFILNRQYGFYLMDFYAPSILLVCISWVSFWMAPDAVPGRTIL 148
++FST S Y L+L+F L R G++++ Y PSIL+ +SWVSFW+ DA R L
Sbjct: 222 VVFSTGS----YPRLSLSFKLKRNIGYFILQTYMPSILITILSWVSFWINYDASAARVAL 277
Query: 149 GASTMLTFFQLGIETGSSLPNVSYIRSNDVWFFACTVFIFLSLAEFAFVNTIW 201
G +T+LT + +LP + Y+++ D++ C VF+F++L E+A VN I+
Sbjct: 278 GITTVLTMTTINTHLRETLPKIPYVKAIDMYLMGCFVFVFMALLEYALVNYIF 330
Score = 102 (41.0 bits), Expect = 8.8e-27, Sum P(2) = 8.8e-27
Identities = 22/91 (24%), Positives = 43/91 (47%)
Query: 8 VDIGNLSFQQEFKVQLLLQLH----WKDPRLEYRHYAPHITEMVGERNFIQNIWTPHIYL 63
+DI ++ E + L ++ W+D RL Y ++T + +W P Y
Sbjct: 66 IDIASIDMVSEVNMDYTLTMYFQQAWRDKRLSYNVIPLNLTL---DNRVADQLWVPDTYF 122
Query: 64 TNERDSLVLGLYRRDMLVSILPDGDMLFSTR 94
N++ S V G+ ++ ++ + PDG +L+ R
Sbjct: 123 LNDKKSFVHGVTVKNRMIRLHPDGTVLYGLR 153
>MGI|MGI:95620 [details] [associations]
symbol:Gabrb2 "gamma-aminobutyric acid (GABA) A receptor,
subunit beta 2" species:10090 "Mus musculus" [GO:0004890 "GABA-A
receptor activity" evidence=ISO] [GO:0005216 "ion channel activity"
evidence=IEA] [GO:0005230 "extracellular ligand-gated ion channel
activity" evidence=IEA] [GO:0005237 "inhibitory extracellular
ligand-gated ion channel activity" evidence=ISO] [GO:0005254
"chloride channel activity" evidence=IEA] [GO:0005515 "protein
binding" evidence=IPI] [GO:0005829 "cytosol" evidence=ISO]
[GO:0005886 "plasma membrane" evidence=IEA] [GO:0006810 "transport"
evidence=IEA] [GO:0006811 "ion transport" evidence=IEA] [GO:0006821
"chloride transport" evidence=IEA] [GO:0007605 "sensory perception
of sound" evidence=IMP] [GO:0016020 "membrane" evidence=ISO]
[GO:0016021 "integral to membrane" evidence=IEA] [GO:0030054 "cell
junction" evidence=IEA] [GO:0034707 "chloride channel complex"
evidence=IEA] [GO:0045202 "synapse" evidence=IEA] [GO:0045211
"postsynaptic membrane" evidence=IEA] [GO:0048666 "neuron
development" evidence=IMP] [GO:0051932 "synaptic transmission,
GABAergic" evidence=ISO] [GO:0060119 "inner ear receptor cell
development" evidence=IMP] [GO:0060384 "innervation" evidence=IMP]
[GO:0090102 "cochlea development" evidence=IMP] InterPro:IPR002289
InterPro:IPR006028 InterPro:IPR006029 InterPro:IPR006201
InterPro:IPR006202 InterPro:IPR018000 Pfam:PF02931 Pfam:PF02932
PRINTS:PR00252 PRINTS:PR00253 PRINTS:PR01160 PROSITE:PS00236
MGI:MGI:95620 GO:GO:0005829 GO:GO:0005886 GO:GO:0030054
GO:GO:0045211 GO:GO:0004890 Gene3D:2.70.170.10 PANTHER:PTHR18945
SUPFAM:SSF90112 SUPFAM:SSF63712 TIGRFAMs:TIGR00860 GO:GO:0007605
GO:GO:0034707 GO:GO:0005254 GO:GO:0090102 GO:GO:0060119
HOVERGEN:HBG051707 GO:GO:0005237 GO:GO:0060384 eggNOG:NOG77438
GeneTree:ENSGT00630000089685 HOGENOM:HOG000231335 KO:K05181
OrthoDB:EOG45756F CTD:2561 OMA:TSSIQYR EMBL:U14419 EMBL:GU086167
EMBL:AK090279 EMBL:AL627444 EMBL:AL645964 EMBL:CH466609
EMBL:BC145973 EMBL:BC145975 IPI:IPI00323554 IPI:IPI00955696
PIR:S53531 RefSeq:NP_032096.1 UniGene:Mm.338723 UniGene:Mm.471870
ProteinModelPortal:P63137 SMR:P63137 STRING:P63137
PhosphoSite:P63137 PRIDE:P63137 Ensembl:ENSMUST00000007797
GeneID:14401 KEGG:mmu:14401 UCSC:uc007imi.1 InParanoid:A6H6R7
ChEMBL:CHEMBL4545 NextBio:285949 Bgee:P63137 Genevestigator:P63137
GermOnline:ENSMUSG00000007653 Uniprot:P63137
Length = 512
Score = 229 (85.7 bits), Expect = 8.8e-27, Sum P(2) = 8.8e-27
Identities = 44/113 (38%), Positives = 70/113 (61%)
Query: 89 MLFSTRSRAYMYSSLTLTFILNRQYGFYLMDFYAPSILLVCISWVSFWMAPDAVPGRTIL 148
++FST S Y L+L+F L R G++++ Y PSIL+ +SWVSFW+ DA R L
Sbjct: 222 VVFSTGS----YPRLSLSFKLKRNIGYFILQTYMPSILITILSWVSFWINYDASAARVAL 277
Query: 149 GASTMLTFFQLGIETGSSLPNVSYIRSNDVWFFACTVFIFLSLAEFAFVNTIW 201
G +T+LT + +LP + Y+++ D++ C VF+F++L E+A VN I+
Sbjct: 278 GITTVLTMTTINTHLRETLPKIPYVKAIDMYLMGCFVFVFMALLEYALVNYIF 330
Score = 102 (41.0 bits), Expect = 8.8e-27, Sum P(2) = 8.8e-27
Identities = 22/91 (24%), Positives = 43/91 (47%)
Query: 8 VDIGNLSFQQEFKVQLLLQLH----WKDPRLEYRHYAPHITEMVGERNFIQNIWTPHIYL 63
+DI ++ E + L ++ W+D RL Y ++T + +W P Y
Sbjct: 66 IDIASIDMVSEVNMDYTLTMYFQQAWRDKRLSYNVIPLNLTL---DNRVADQLWVPDTYF 122
Query: 64 TNERDSLVLGLYRRDMLVSILPDGDMLFSTR 94
N++ S V G+ ++ ++ + PDG +L+ R
Sbjct: 123 LNDKKSFVHGVTVKNRMIRLHPDGTVLYGLR 153
>MGI|MGI:95751 [details] [associations]
symbol:Glrb "glycine receptor, beta subunit" species:10090
"Mus musculus" [GO:0001964 "startle response" evidence=ISO;ISS]
[GO:0005216 "ion channel activity" evidence=IEA] [GO:0005230
"extracellular ligand-gated ion channel activity" evidence=IEA]
[GO:0005254 "chloride channel activity" evidence=IEA] [GO:0005488
"binding" evidence=IPI] [GO:0005783 "endoplasmic reticulum"
evidence=ISA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0006810 "transport" evidence=IEA] [GO:0006811 "ion transport"
evidence=ISO;ISS] [GO:0006821 "chloride transport" evidence=IMP]
[GO:0007218 "neuropeptide signaling pathway" evidence=ISO;ISS]
[GO:0007268 "synaptic transmission" evidence=ISO;ISS] [GO:0007340
"acrosome reaction" evidence=IMP] [GO:0007399 "nervous system
development" evidence=ISO;ISS] [GO:0007601 "visual perception"
evidence=IMP] [GO:0007628 "adult walking behavior" evidence=IMP]
[GO:0009897 "external side of plasma membrane" evidence=ISA]
[GO:0016020 "membrane" evidence=ISA;IDA] [GO:0016021 "integral to
membrane" evidence=IEA] [GO:0016594 "glycine binding"
evidence=ISO;ISS;IMP] [GO:0016933 "extracellular-glycine-gated ion
channel activity" evidence=ISO;ISS] [GO:0016934
"extracellular-glycine-gated chloride channel activity"
evidence=ISS;IMP] [GO:0030054 "cell junction" evidence=IEA]
[GO:0034220 "ion transmembrane transport" evidence=IMP] [GO:0034707
"chloride channel complex" evidence=IEA] [GO:0042391 "regulation of
membrane potential" evidence=IMP] [GO:0045202 "synapse"
evidence=IEA] [GO:0045211 "postsynaptic membrane" evidence=IEA]
[GO:0050905 "neuromuscular process" evidence=IMP] [GO:0051291
"protein heterooligomerization" evidence=ISO] [GO:0060012 "synaptic
transmission, glycinergic" evidence=ISO;IMP] [GO:0060013 "righting
reflex" evidence=IMP] InterPro:IPR006029 InterPro:IPR006201
InterPro:IPR006202 InterPro:IPR008060 InterPro:IPR018000
Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252 PRINTS:PR01677
PROSITE:PS00236 MGI:MGI:95751 GO:GO:0005783 GO:GO:0051291
GO:GO:0007399 GO:GO:0009897 GO:GO:0030054 GO:GO:0045211
Gene3D:2.70.170.10 PANTHER:PTHR18945 SUPFAM:SSF90112
SUPFAM:SSF63712 TIGRFAMs:TIGR00860 GO:GO:0007218 GO:GO:0007601
GO:GO:0042391 GO:GO:0016934 GO:GO:0007340 GO:GO:0060013
GO:GO:0034707 GO:GO:0007628 GO:GO:0001964 EMBL:CH466547
HOVERGEN:HBG051707 GeneTree:ENSGT00550000074453
HOGENOM:HOG000231336 GO:GO:0016594 GO:GO:0060012 CTD:2743
eggNOG:NOG295166 KO:K05196 OrthoDB:EOG4HMJ97 PANTHER:PTHR18945:SF29
OMA:PTMFKCL EMBL:U09399 EMBL:X81202 EMBL:X81201 EMBL:L32594
EMBL:AK083251 EMBL:BC037605 IPI:IPI00108776 PIR:S46459
RefSeq:NP_034428.2 UniGene:Mm.275639 ProteinModelPortal:P48168
SMR:P48168 MINT:MINT-4787310 STRING:P48168 PhosphoSite:P48168
PRIDE:P48168 Ensembl:ENSMUST00000029654 GeneID:14658 KEGG:mmu:14658
InParanoid:Q5U5X3 NextBio:286522 Bgee:P48168 CleanEx:MM_GLRB
Genevestigator:P48168 GermOnline:ENSMUSG00000028020 Uniprot:P48168
Length = 496
Score = 231 (86.4 bits), Expect = 9.2e-27, Sum P(2) = 9.2e-27
Identities = 43/101 (42%), Positives = 63/101 (62%)
Query: 100 YSSLTLTFILNRQYGFYLMDFYAPSILLVCISWVSFWMAPDAVPGRTILGASTMLTFFQL 159
Y+ + + F L RQ GFY+M YAP++L+V +SW+SFW+ PDA R LG ++L+
Sbjct: 253 YTCVEVIFTLRRQVGFYMMGVYAPTLLIVVLSWLSFWINPDASAARVPLGIFSVLSLASE 312
Query: 160 GIETGSSLPNVSYIRSNDVWFFACTVFIFLSLAEFAFVNTI 200
+ LP VSY+++ DVW AC +F F SL E+A V +
Sbjct: 313 CTTLAAELPKVSYVKALDVWLIACLLFGFASLVEYAVVQVM 353
Score = 99 (39.9 bits), Expect = 9.2e-27, Sum P(2) = 9.2e-27
Identities = 24/96 (25%), Positives = 47/96 (48%)
Query: 18 EFKVQLLLQLHWKDPRLEYRHYAPHITEMVGERNFIQNIWTPHIYLTNERDSLVLGLYRR 77
+++V + L+ W DPRL+ + + + +W P ++ NE+ + + +
Sbjct: 100 DYRVNIFLRQKWNDPRLKLPSDFRGSDALTVDPTMYKCLWKPDLFFANEKSANFHDVTQE 159
Query: 78 DMLVSILPDGDMLFSTRSRAYMYSSLTLT-FILNRQ 112
++L+ I DGD+L S R + L LT F ++ Q
Sbjct: 160 NILLFIFRDGDVLVSMRLSITLSCPLDLTLFPMDTQ 195
>RGD|2706 [details] [associations]
symbol:Glrb "glycine receptor, beta" species:10116 "Rattus
norvegicus" [GO:0001964 "startle response" evidence=ISO;ISS]
[GO:0005515 "protein binding" evidence=IPI] [GO:0005886 "plasma
membrane" evidence=IEA] [GO:0006811 "ion transport" evidence=ISO;ISS]
[GO:0006821 "chloride transport" evidence=ISO] [GO:0007218
"neuropeptide signaling pathway" evidence=ISO;ISS] [GO:0007268
"synaptic transmission" evidence=ISO;ISS;TAS] [GO:0007340 "acrosome
reaction" evidence=IEA;ISO] [GO:0007399 "nervous system development"
evidence=ISO;ISS] [GO:0007601 "visual perception" evidence=IEA;ISO]
[GO:0007628 "adult walking behavior" evidence=IEA;ISO] [GO:0016020
"membrane" evidence=ISO] [GO:0016021 "integral to membrane"
evidence=IEA;TAS] [GO:0016594 "glycine binding" evidence=ISO;ISS;IDA]
[GO:0016933 "extracellular-glycine-gated ion channel activity"
evidence=ISO;ISS;IDA;TAS] [GO:0016934 "extracellular-glycine-gated
chloride channel activity" evidence=IEA;ISO;ISS] [GO:0030054 "cell
junction" evidence=IEA] [GO:0034220 "ion transmembrane transport"
evidence=ISO] [GO:0034707 "chloride channel complex" evidence=IEA]
[GO:0042391 "regulation of membrane potential" evidence=IEA;ISO]
[GO:0045211 "postsynaptic membrane" evidence=IEA;TAS] [GO:0050905
"neuromuscular process" evidence=ISO] [GO:0051291 "protein
heterooligomerization" evidence=IDA] [GO:0060012 "synaptic
transmission, glycinergic" evidence=ISO;IDA] [GO:0060013 "righting
reflex" evidence=IEA;ISO] InterPro:IPR006029 InterPro:IPR006201
InterPro:IPR006202 InterPro:IPR008060 InterPro:IPR018000 Pfam:PF02931
Pfam:PF02932 PRINTS:PR00252 PRINTS:PR01677 PROSITE:PS00236 RGD:2706
GO:GO:0016021 GO:GO:0005886 GO:GO:0051291 GO:GO:0007399 GO:GO:0030054
GO:GO:0045211 Gene3D:2.70.170.10 PANTHER:PTHR18945 SUPFAM:SSF90112
SUPFAM:SSF63712 TIGRFAMs:TIGR00860 GO:GO:0007218 GO:GO:0007601
GO:GO:0042391 GO:GO:0016934 GO:GO:0007340 GO:GO:0060013 GO:GO:0034707
GO:GO:0007628 GO:GO:0001964 HOVERGEN:HBG051707 GO:GO:0016933 PDB:1T3E
PDB:2FTS PDBsum:1T3E PDBsum:2FTS GeneTree:ENSGT00550000074453
HOGENOM:HOG000231336 GO:GO:0016594 GO:GO:0060012 CTD:2743
eggNOG:NOG295166 KO:K05196 OrthoDB:EOG4HMJ97 PANTHER:PTHR18945:SF29
OMA:PTMFKCL EMBL:AJ310839 IPI:IPI00202491 PIR:JH0165
RefSeq:NP_445748.1 UniGene:Rn.94903 ProteinModelPortal:P20781
IntAct:P20781 STRING:P20781 Ensembl:ENSRNOT00000014170 GeneID:25456
KEGG:rno:25456 UCSC:RGD:2706 InParanoid:P20781 BindingDB:P20781
ChEMBL:CHEMBL4126 EvolutionaryTrace:P20781 NextBio:606717
ArrayExpress:P20781 Genevestigator:P20781
GermOnline:ENSRNOG00000010199 Uniprot:P20781
Length = 496
Score = 231 (86.4 bits), Expect = 9.2e-27, Sum P(2) = 9.2e-27
Identities = 43/101 (42%), Positives = 63/101 (62%)
Query: 100 YSSLTLTFILNRQYGFYLMDFYAPSILLVCISWVSFWMAPDAVPGRTILGASTMLTFFQL 159
Y+ + + F L RQ GFY+M YAP++L+V +SW+SFW+ PDA R LG ++L+
Sbjct: 253 YTCVEVIFTLRRQVGFYMMGVYAPTLLIVVLSWLSFWINPDASAARVPLGIFSVLSLASE 312
Query: 160 GIETGSSLPNVSYIRSNDVWFFACTVFIFLSLAEFAFVNTI 200
+ LP VSY+++ DVW AC +F F SL E+A V +
Sbjct: 313 CTTLAAELPKVSYVKALDVWLIACLLFGFASLVEYAVVQVM 353
Score = 99 (39.9 bits), Expect = 9.2e-27, Sum P(2) = 9.2e-27
Identities = 24/96 (25%), Positives = 47/96 (48%)
Query: 18 EFKVQLLLQLHWKDPRLEYRHYAPHITEMVGERNFIQNIWTPHIYLTNERDSLVLGLYRR 77
+++V + L+ W DPRL+ + + + +W P ++ NE+ + + +
Sbjct: 100 DYRVNIFLRQKWNDPRLKLPSDFRGSDALTVDPTMYKCLWKPDLFFANEKSANFHDVTQE 159
Query: 78 DMLVSILPDGDMLFSTRSRAYMYSSLTLT-FILNRQ 112
++L+ I DGD+L S R + L LT F ++ Q
Sbjct: 160 NILLFIFRDGDVLVSMRLSITLSCPLDLTLFPMDTQ 195
>UNIPROTKB|Q9GJS9 [details] [associations]
symbol:GLRB "Glycine receptor subunit beta" species:9913
"Bos taurus" [GO:0001964 "startle response" evidence=ISS]
[GO:0016934 "extracellular-glycine-gated chloride channel activity"
evidence=ISS] [GO:0016933 "extracellular-glycine-gated ion channel
activity" evidence=ISS] [GO:0016594 "glycine binding" evidence=ISS]
[GO:0007399 "nervous system development" evidence=ISS] [GO:0007268
"synaptic transmission" evidence=ISS] [GO:0007218 "neuropeptide
signaling pathway" evidence=ISS] [GO:0006811 "ion transport"
evidence=ISS] [GO:0045211 "postsynaptic membrane" evidence=IEA]
[GO:0005886 "plasma membrane" evidence=IEA] [GO:0034707 "chloride
channel complex" evidence=IEA] [GO:0030054 "cell junction"
evidence=IEA] InterPro:IPR006029 InterPro:IPR006201
InterPro:IPR006202 InterPro:IPR008060 InterPro:IPR018000
Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252 PRINTS:PR01677
PROSITE:PS00236 GO:GO:0005886 GO:GO:0007399 GO:GO:0007268
GO:GO:0030054 GO:GO:0045211 Gene3D:2.70.170.10 PANTHER:PTHR18945
SUPFAM:SSF90112 SUPFAM:SSF63712 TIGRFAMs:TIGR00860 GO:GO:0007218
GO:GO:0016934 GO:GO:0034707 GO:GO:0001964 HOVERGEN:HBG051707
GO:GO:0016933 HOGENOM:HOG000231336 EMBL:AF268376 EMBL:AF268374
EMBL:AF268367 EMBL:AF268370 EMBL:AF268369 EMBL:AF268371
EMBL:AF268368 EMBL:AF268372 EMBL:AF268373 EMBL:BC123491
IPI:IPI00694047 RefSeq:NP_776496.1 UniGene:Bt.5975
ProteinModelPortal:Q9GJS9 PRIDE:Q9GJS9 GeneID:281198
KEGG:bta:281198 CTD:2743 eggNOG:NOG295166 InParanoid:Q9GJS9
KO:K05196 OrthoDB:EOG4HMJ97 NextBio:20805254 PANTHER:PTHR18945:SF29
Uniprot:Q9GJS9
Length = 497
Score = 231 (86.4 bits), Expect = 9.3e-27, Sum P(2) = 9.3e-27
Identities = 43/101 (42%), Positives = 63/101 (62%)
Query: 100 YSSLTLTFILNRQYGFYLMDFYAPSILLVCISWVSFWMAPDAVPGRTILGASTMLTFFQL 159
Y+ + + F L RQ GFY+M YAP++L+V +SW+SFW+ PDA R LG ++L+
Sbjct: 253 YTCVEVIFTLRRQVGFYMMGVYAPTLLIVVLSWLSFWINPDASAARVPLGIFSVLSLASE 312
Query: 160 GIETGSSLPNVSYIRSNDVWFFACTVFIFLSLAEFAFVNTI 200
+ LP VSY+++ DVW AC +F F SL E+A V +
Sbjct: 313 CTTLAAELPKVSYVKALDVWLIACLLFGFASLVEYAVVQVM 353
Score = 99 (39.9 bits), Expect = 9.3e-27, Sum P(2) = 9.3e-27
Identities = 24/96 (25%), Positives = 47/96 (48%)
Query: 18 EFKVQLLLQLHWKDPRLEYRHYAPHITEMVGERNFIQNIWTPHIYLTNERDSLVLGLYRR 77
+++V + L+ W DPRL+ + + + +W P ++ NE+ + + +
Sbjct: 100 DYRVNIFLRQKWNDPRLKLPSDFRGSDALTVDPTMYKCLWKPDLFFANEKSANFHDVTQE 159
Query: 78 DMLVSILPDGDMLFSTRSRAYMYSSLTLT-FILNRQ 112
++L+ I DGD+L S R + L LT F ++ Q
Sbjct: 160 NILLFIFRDGDVLVSMRLSITLSCPLDLTLFPMDTQ 195
>UNIPROTKB|E2QS67 [details] [associations]
symbol:GLRB "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0060013 "righting reflex" evidence=IEA]
[GO:0060012 "synaptic transmission, glycinergic" evidence=IEA]
[GO:0042391 "regulation of membrane potential" evidence=IEA]
[GO:0016934 "extracellular-glycine-gated chloride channel activity"
evidence=IEA] [GO:0016594 "glycine binding" evidence=IEA]
[GO:0007628 "adult walking behavior" evidence=IEA] [GO:0007601
"visual perception" evidence=IEA] [GO:0007399 "nervous system
development" evidence=IEA] [GO:0007340 "acrosome reaction"
evidence=IEA] [GO:0007218 "neuropeptide signaling pathway"
evidence=IEA] [GO:0001964 "startle response" evidence=IEA]
[GO:0016021 "integral to membrane" evidence=IEA] [GO:0045211
"postsynaptic membrane" evidence=IEA] InterPro:IPR006029
InterPro:IPR006201 InterPro:IPR006202 InterPro:IPR008060
InterPro:IPR018000 Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252
PRINTS:PR01677 PROSITE:PS00236 GO:GO:0016021 GO:GO:0007399
GO:GO:0045211 Gene3D:2.70.170.10 PANTHER:PTHR18945 SUPFAM:SSF90112
SUPFAM:SSF63712 TIGRFAMs:TIGR00860 GO:GO:0007218 GO:GO:0007601
GO:GO:0042391 GO:GO:0016934 GO:GO:0007340 GO:GO:0060013
GO:GO:0007628 GO:GO:0001964 GeneTree:ENSGT00550000074453
GO:GO:0016594 GO:GO:0060012 CTD:2743 KO:K05196
PANTHER:PTHR18945:SF29 OMA:PTMFKCL EMBL:AAEX03010077
RefSeq:XP_532701.1 Ensembl:ENSCAFT00000013690 GeneID:475477
KEGG:cfa:475477 NextBio:20851316 Uniprot:E2QS67
Length = 497
Score = 231 (86.4 bits), Expect = 9.3e-27, Sum P(2) = 9.3e-27
Identities = 43/101 (42%), Positives = 63/101 (62%)
Query: 100 YSSLTLTFILNRQYGFYLMDFYAPSILLVCISWVSFWMAPDAVPGRTILGASTMLTFFQL 159
Y+ + + F L RQ GFY+M YAP++L+V +SW+SFW+ PDA R LG ++L+
Sbjct: 253 YTCVEVIFTLRRQVGFYMMGVYAPTLLIVVLSWLSFWINPDASAARVPLGIFSVLSLASE 312
Query: 160 GIETGSSLPNVSYIRSNDVWFFACTVFIFLSLAEFAFVNTI 200
+ LP VSY+++ DVW AC +F F SL E+A V +
Sbjct: 313 CTTLAAELPKVSYVKALDVWLIACLLFGFASLVEYAVVQVM 353
Score = 99 (39.9 bits), Expect = 9.3e-27, Sum P(2) = 9.3e-27
Identities = 24/96 (25%), Positives = 47/96 (48%)
Query: 18 EFKVQLLLQLHWKDPRLEYRHYAPHITEMVGERNFIQNIWTPHIYLTNERDSLVLGLYRR 77
+++V + L+ W DPRL+ + + + +W P ++ NE+ + + +
Sbjct: 100 DYRVNIFLRQKWNDPRLKLPSDFRGSDALTVDPTMYKCLWKPDLFFANEKSANFHDVTQE 159
Query: 78 DMLVSILPDGDMLFSTRSRAYMYSSLTLT-FILNRQ 112
++L+ I DGD+L S R + L LT F ++ Q
Sbjct: 160 NILLFIFRDGDVLVSMRLSITLSCPLDLTLFPMDTQ 195
>UNIPROTKB|P48167 [details] [associations]
symbol:GLRB "Glycine receptor subunit beta" species:9606
"Homo sapiens" [GO:0030054 "cell junction" evidence=IEA]
[GO:0034707 "chloride channel complex" evidence=IEA] [GO:0007340
"acrosome reaction" evidence=IEA] [GO:0007601 "visual perception"
evidence=IEA] [GO:0007628 "adult walking behavior" evidence=IEA]
[GO:0042391 "regulation of membrane potential" evidence=IEA]
[GO:0051291 "protein heterooligomerization" evidence=IEA]
[GO:0060012 "synaptic transmission, glycinergic" evidence=IEA]
[GO:0060013 "righting reflex" evidence=IEA] [GO:0045211
"postsynaptic membrane" evidence=IEA] [GO:0016934
"extracellular-glycine-gated chloride channel activity"
evidence=IDA;TAS] [GO:0005887 "integral to plasma membrane"
evidence=NAS] [GO:0006811 "ion transport" evidence=IDA] [GO:0007218
"neuropeptide signaling pathway" evidence=IDA] [GO:0016933
"extracellular-glycine-gated ion channel activity" evidence=IMP]
[GO:0007268 "synaptic transmission" evidence=IMP] [GO:0007399
"nervous system development" evidence=IMP] [GO:0001964 "startle
response" evidence=IMP] [GO:0016594 "glycine binding" evidence=IMP]
[GO:0005515 "protein binding" evidence=IPI] [GO:0005886 "plasma
membrane" evidence=TAS] [GO:0034220 "ion transmembrane transport"
evidence=TAS] [GO:0055085 "transmembrane transport" evidence=TAS]
Reactome:REACT_15518 InterPro:IPR006029 InterPro:IPR006201
InterPro:IPR006202 InterPro:IPR008060 InterPro:IPR018000
Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252 PRINTS:PR01677
PROSITE:PS00236 GO:GO:0051291 GO:GO:0007399 GO:GO:0005887
GO:GO:0007268 GO:GO:0030054 GO:GO:0045211 Gene3D:2.70.170.10
PANTHER:PTHR18945 SUPFAM:SSF90112 SUPFAM:SSF63712
TIGRFAMs:TIGR00860 GO:GO:0007218 GO:GO:0007601 GO:GO:0042391
GO:GO:0016934 GO:GO:0007340 EMBL:CH471056 GO:GO:0060013
DrugBank:DB00145 GO:GO:0034707 GO:GO:0007628 GO:GO:0001964
HOVERGEN:HBG051707 Orphanet:3197 HOGENOM:HOG000231336 GO:GO:0016594
GO:GO:0060012 TCDB:1.A.9.3.1 CTD:2743 eggNOG:NOG295166 KO:K05196
OrthoDB:EOG4HMJ97 PANTHER:PTHR18945:SF29 EMBL:U33267 EMBL:AF094754
EMBL:AF094755 EMBL:CD013911 EMBL:AK290617 EMBL:AC079403
EMBL:BC032635 IPI:IPI00008224 IPI:IPI00945266 PIR:G02031
RefSeq:NP_000815.1 RefSeq:NP_001159532.1 RefSeq:NP_001159533.1
UniGene:Hs.32973 ProteinModelPortal:P48167 SMR:P48167 STRING:P48167
PhosphoSite:P48167 DMDM:1346173 PRIDE:P48167 DNASU:2743
Ensembl:ENST00000264428 Ensembl:ENST00000509282
Ensembl:ENST00000541722 GeneID:2743 KEGG:hsa:2743 UCSC:uc003ipj.2
GeneCards:GC04P157997 HGNC:HGNC:4329 MIM:138492 MIM:614619
neXtProt:NX_P48167 PharmGKB:PA28730 InParanoid:P48167 OMA:PTMFKCL
PhylomeDB:P48167 GenomeRNAi:2743 NextBio:10812 ArrayExpress:P48167
Bgee:P48167 CleanEx:HS_GLRB Genevestigator:P48167
GermOnline:ENSG00000109738 Uniprot:P48167
Length = 497
Score = 231 (86.4 bits), Expect = 9.3e-27, Sum P(2) = 9.3e-27
Identities = 43/101 (42%), Positives = 63/101 (62%)
Query: 100 YSSLTLTFILNRQYGFYLMDFYAPSILLVCISWVSFWMAPDAVPGRTILGASTMLTFFQL 159
Y+ + + F L RQ GFY+M YAP++L+V +SW+SFW+ PDA R LG ++L+
Sbjct: 253 YTCVEVIFTLRRQVGFYMMGVYAPTLLIVVLSWLSFWINPDASAARVPLGIFSVLSLASE 312
Query: 160 GIETGSSLPNVSYIRSNDVWFFACTVFIFLSLAEFAFVNTI 200
+ LP VSY+++ DVW AC +F F SL E+A V +
Sbjct: 313 CTTLAAELPKVSYVKALDVWLIACLLFGFASLVEYAVVQVM 353
Score = 99 (39.9 bits), Expect = 9.3e-27, Sum P(2) = 9.3e-27
Identities = 24/96 (25%), Positives = 47/96 (48%)
Query: 18 EFKVQLLLQLHWKDPRLEYRHYAPHITEMVGERNFIQNIWTPHIYLTNERDSLVLGLYRR 77
+++V + L+ W DPRL+ + + + +W P ++ NE+ + + +
Sbjct: 100 DYRVNIFLRQKWNDPRLKLPSDFRGSDALTVDPTMYKCLWKPDLFFANEKSANFHDVTQE 159
Query: 78 DMLVSILPDGDMLFSTRSRAYMYSSLTLT-FILNRQ 112
++L+ I DGD+L S R + L LT F ++ Q
Sbjct: 160 NILLFIFRDGDVLVSMRLSITLSCPLDLTLFPMDTQ 195
>UNIPROTKB|E1BFC0 [details] [associations]
symbol:GABRB2 "Gamma-aminobutyric acid receptor subunit
beta-2" species:9913 "Bos taurus" [GO:0090102 "cochlea development"
evidence=IEA] [GO:0060384 "innervation" evidence=IEA] [GO:0060119
"inner ear receptor cell development" evidence=IEA] [GO:0007605
"sensory perception of sound" evidence=IEA] [GO:0045211
"postsynaptic membrane" evidence=IEA] [GO:0030054 "cell junction"
evidence=IEA] [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0005886 "plasma membrane" evidence=IEA] [GO:0005230
"extracellular ligand-gated ion channel activity" evidence=IEA]
[GO:0004890 "GABA-A receptor activity" evidence=IEA]
InterPro:IPR002289 InterPro:IPR006028 InterPro:IPR006029
InterPro:IPR006201 InterPro:IPR006202 InterPro:IPR018000
Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252 PRINTS:PR00253
PRINTS:PR01160 PROSITE:PS00236 GO:GO:0016021 GO:GO:0005886
GO:GO:0030054 GO:GO:0045211 GO:GO:0005230 GO:GO:0004890
Gene3D:2.70.170.10 PANTHER:PTHR18945 SUPFAM:SSF90112
SUPFAM:SSF63712 TIGRFAMs:TIGR00860 GO:GO:0007605 GO:GO:0090102
GO:GO:0060119 GO:GO:0060384 GeneTree:ENSGT00630000089685
OMA:TSSIQYR EMBL:DAAA02020899 EMBL:DAAA02020900 EMBL:DAAA02020901
EMBL:DAAA02020902 EMBL:DAAA02020903 EMBL:DAAA02020904
EMBL:DAAA02020905 IPI:IPI01001787 ProteinModelPortal:E1BFC0
Ensembl:ENSBTAT00000024736 BindingDB:E1BFC0 Uniprot:E1BFC0
Length = 519
Score = 229 (85.7 bits), Expect = 9.4e-27, Sum P(2) = 9.4e-27
Identities = 44/113 (38%), Positives = 70/113 (61%)
Query: 89 MLFSTRSRAYMYSSLTLTFILNRQYGFYLMDFYAPSILLVCISWVSFWMAPDAVPGRTIL 148
++FST S Y L+L+F L R G++++ Y PSIL+ +SWVSFW+ DA R L
Sbjct: 229 VVFSTGS----YPRLSLSFKLKRNIGYFILQTYMPSILITILSWVSFWINYDASAARVAL 284
Query: 149 GASTMLTFFQLGIETGSSLPNVSYIRSNDVWFFACTVFIFLSLAEFAFVNTIW 201
G +T+LT + +LP + Y+++ D++ C VF+F++L E+A VN I+
Sbjct: 285 GITTVLTMTTINTHLRETLPKIPYVKAIDMYLMGCFVFVFMALLEYALVNYIF 337
Score = 102 (41.0 bits), Expect = 9.4e-27, Sum P(2) = 9.4e-27
Identities = 22/91 (24%), Positives = 43/91 (47%)
Query: 8 VDIGNLSFQQEFKVQLLLQLH----WKDPRLEYRHYAPHITEMVGERNFIQNIWTPHIYL 63
+DI ++ E + L ++ W+D RL Y ++T + +W P Y
Sbjct: 73 IDIASIDMVSEVNMDYTLTMYFQQAWRDKRLSYNVIPLNLTL---DNRVADQLWVPDTYF 129
Query: 64 TNERDSLVLGLYRRDMLVSILPDGDMLFSTR 94
N++ S V G+ ++ ++ + PDG +L+ R
Sbjct: 130 LNDKKSFVHGVTVKNRMIRLHPDGTVLYGLR 160
>UNIPROTKB|F1NB54 [details] [associations]
symbol:GABRB2 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0004890 "GABA-A receptor activity"
evidence=IEA] [GO:0005230 "extracellular ligand-gated ion channel
activity" evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0016021 "integral to membrane" evidence=IEA] [GO:0030054 "cell
junction" evidence=IEA] [GO:0045211 "postsynaptic membrane"
evidence=IEA] [GO:0007605 "sensory perception of sound"
evidence=IEA] [GO:0060119 "inner ear receptor cell development"
evidence=IEA] [GO:0060384 "innervation" evidence=IEA] [GO:0090102
"cochlea development" evidence=IEA] InterPro:IPR002289
InterPro:IPR006028 InterPro:IPR006029 InterPro:IPR006201
InterPro:IPR006202 InterPro:IPR018000 Pfam:PF02931 Pfam:PF02932
PRINTS:PR00252 PRINTS:PR00253 PRINTS:PR01160 PROSITE:PS00236
GO:GO:0016021 GO:GO:0005886 GO:GO:0030054 GO:GO:0045211
GO:GO:0005230 GO:GO:0004890 Gene3D:2.70.170.10 PANTHER:PTHR18945
SUPFAM:SSF90112 SUPFAM:SSF63712 TIGRFAMs:TIGR00860
GeneTree:ENSGT00630000089685 OMA:TSSIQYR EMBL:AADN02035869
EMBL:AADN02035870 EMBL:AADN02035871 EMBL:AADN02035872
EMBL:AADN02035873 EMBL:AADN02035874 IPI:IPI00587146
Ensembl:ENSGALT00000011745 Uniprot:F1NB54
Length = 475
Score = 227 (85.0 bits), Expect = 9.9e-27, Sum P(2) = 9.9e-27
Identities = 43/114 (37%), Positives = 71/114 (62%)
Query: 88 DMLFSTRSRAYMYSSLTLTFILNRQYGFYLMDFYAPSILLVCISWVSFWMAPDAVPGRTI 147
+++FST + Y L+L+F L R G++++ Y PSIL+ +SWVSFW+ DA R
Sbjct: 222 NVVFSTGA----YPRLSLSFKLKRNIGYFILQTYMPSILITILSWVSFWINYDASAARVA 277
Query: 148 LGASTMLTFFQLGIETGSSLPNVSYIRSNDVWFFACTVFIFLSLAEFAFVNTIW 201
LG +T+LT + +LP + Y+++ D++ C VF+F++L E+A VN I+
Sbjct: 278 LGITTVLTMTTINTHLRETLPKIPYVKAIDMYLMGCFVFVFMALLEYALVNYIF 331
Score = 102 (41.0 bits), Expect = 9.9e-27, Sum P(2) = 9.9e-27
Identities = 22/91 (24%), Positives = 43/91 (47%)
Query: 8 VDIGNLSFQQEFKVQLLLQLH----WKDPRLEYRHYAPHITEMVGERNFIQNIWTPHIYL 63
+DI ++ E + L ++ W+D RL Y ++T + +W P Y
Sbjct: 67 IDIASIDMVSEVNMDYTLTMYFQQAWRDKRLSYNVIPLNLTL---DNRVADQLWVPDTYF 123
Query: 64 TNERDSLVLGLYRRDMLVSILPDGDMLFSTR 94
N++ S V G+ ++ ++ + PDG +L+ R
Sbjct: 124 LNDKKSFVHGVTVKNRMIRLHPDGTVLYGLR 154
>UNIPROTKB|F1P037 [details] [associations]
symbol:GLRB "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0045211 "postsynaptic membrane" evidence=IEA]
[GO:0016021 "integral to membrane" evidence=IEA] [GO:0001964
"startle response" evidence=IEA] [GO:0007218 "neuropeptide
signaling pathway" evidence=IEA] [GO:0007340 "acrosome reaction"
evidence=IEA] [GO:0007399 "nervous system development"
evidence=IEA] [GO:0007601 "visual perception" evidence=IEA]
[GO:0007628 "adult walking behavior" evidence=IEA] [GO:0016594
"glycine binding" evidence=IEA] [GO:0016934
"extracellular-glycine-gated chloride channel activity"
evidence=IEA] [GO:0042391 "regulation of membrane potential"
evidence=IEA] [GO:0060012 "synaptic transmission, glycinergic"
evidence=IEA] [GO:0060013 "righting reflex" evidence=IEA]
InterPro:IPR006029 InterPro:IPR006201 InterPro:IPR006202
InterPro:IPR008060 InterPro:IPR018000 Pfam:PF02931 Pfam:PF02932
PRINTS:PR00252 PRINTS:PR01677 PROSITE:PS00236 GO:GO:0016021
GO:GO:0045211 Gene3D:2.70.170.10 PANTHER:PTHR18945 SUPFAM:SSF90112
SUPFAM:SSF63712 TIGRFAMs:TIGR00860 GO:GO:0007218 GO:GO:0042391
GO:GO:0016934 GO:GO:0007340 GO:GO:0060013
GeneTree:ENSGT00550000074453 GO:GO:0016594 CTD:2743 KO:K05196
PANTHER:PTHR18945:SF29 OMA:PTMFKCL EMBL:AADN02016519
EMBL:AADN02016520 IPI:IPI00600545 RefSeq:XP_420379.2
UniGene:Gga.14206 ProteinModelPortal:F1P037
Ensembl:ENSGALT00000015305 GeneID:422411 KEGG:gga:422411
NextBio:20825047 Uniprot:F1P037
Length = 497
Score = 227 (85.0 bits), Expect = 1.3e-26, Sum P(2) = 1.3e-26
Identities = 42/101 (41%), Positives = 62/101 (61%)
Query: 100 YSSLTLTFILNRQYGFYLMDFYAPSILLVCISWVSFWMAPDAVPGRTILGASTMLTFFQL 159
Y+ + + F L RQ GFY+M YAP++L+V +SW+SFW+ PDA R LG ++L+
Sbjct: 253 YTCVEVIFTLRRQVGFYMMGVYAPTLLIVVLSWLSFWINPDASAARVPLGIFSVLSLASE 312
Query: 160 GIETGSSLPNVSYIRSNDVWFFACTVFIFLSLAEFAFVNTI 200
+ LP VSY+++ DVW C +F F SL E+A V +
Sbjct: 313 CTTLAAELPKVSYVKALDVWLIVCLLFGFASLVEYAVVQVM 353
Score = 102 (41.0 bits), Expect = 1.3e-26, Sum P(2) = 1.3e-26
Identities = 24/96 (25%), Positives = 49/96 (51%)
Query: 18 EFKVQLLLQLHWKDPRLEYRHYAPHITEMVGERNFIQNIWTPHIYLTNERDSLVLGLYRR 77
+++V + L+ W DPRL+ + + + + +W P ++ NE+++ + +
Sbjct: 100 DYRVNIFLRQKWNDPRLKLPNDWRGSDTLTVDPTMFKCLWKPDLFFANEKNANFHDVTQE 159
Query: 78 DMLVSILPDGDMLFSTRSRAYMYSSLTLT-FILNRQ 112
++L+ I DGD+L S R + L LT F ++ Q
Sbjct: 160 NILLFIFRDGDVLVSMRLSITLSCPLDLTLFPMDTQ 195
>UNIPROTKB|E1B988 [details] [associations]
symbol:GABRR3 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0045211 "postsynaptic membrane" evidence=IEA]
[GO:0030054 "cell junction" evidence=IEA] [GO:0016021 "integral to
membrane" evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0005230 "extracellular ligand-gated ion channel activity"
evidence=IEA] InterPro:IPR006028 InterPro:IPR006029
InterPro:IPR006201 InterPro:IPR006202 InterPro:IPR018000
Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252 PRINTS:PR00253
PROSITE:PS00236 GO:GO:0016021 GO:GO:0005886 GO:GO:0030054
GO:GO:0045211 GO:GO:0005230 Gene3D:2.70.170.10 PANTHER:PTHR18945
SUPFAM:SSF90112 SUPFAM:SSF63712 TIGRFAMs:TIGR00860
GeneTree:ENSGT00630000089571 KO:K05190 CTD:200959 OMA:MDFTMTF
EMBL:DAAA02000976 EMBL:DAAA02000977 IPI:IPI00686902
RefSeq:NP_001179448.1 UniGene:Bt.106502 ProteinModelPortal:E1B988
Ensembl:ENSBTAT00000001857 GeneID:520166 KEGG:bta:520166
NextBio:20873038 Uniprot:E1B988
Length = 468
Score = 221 (82.9 bits), Expect = 4.2e-26, Sum P(2) = 4.2e-26
Identities = 43/108 (39%), Positives = 69/108 (63%)
Query: 91 FSTRSRAYMYSSLTLTFILNRQYGFYLMDFYAPSILLVCISWVSFWMAPDAVPGRTILGA 150
F+ S Y+ L + F+L R F+++ Y P++L+V +SWVSFW+ AVP R LG
Sbjct: 245 FAFYSSTGWYNRLFINFVLRRHIFFFVLQTYFPAMLMVMLSWVSFWIDRRAVPARVSLGI 304
Query: 151 STMLTFFQLGIETGSSLPNVSYIRSNDVWFFACTVFIFLSLAEFAFVN 198
+T+LT + +S+P VSYI++ DV+ + ++F+FLS+ E+A VN
Sbjct: 305 TTVLTMSTILSGVSASMPQVSYIKAVDVYLWVSSLFVFLSVIEYAAVN 352
Score = 102 (41.0 bits), Expect = 4.2e-26, Sum P(2) = 4.2e-26
Identities = 23/79 (29%), Positives = 40/79 (50%)
Query: 18 EFKVQLLLQLHWKDPRLEYRHYAPHITE--MVGERNFIQNIWTPHIYLTNERDSLVLGLY 75
+F + L+ +WKD RL + P T M + I+ IW P I+ + + S +
Sbjct: 103 DFTMTFYLRHYWKDERLAF----PSKTNKSMTFDHRLIKKIWVPDIFFVHSKRSFIHDTT 158
Query: 76 RRDMLVSILPDGDMLFSTR 94
++++ + PDG +LFS R
Sbjct: 159 VENIMLRVHPDGSVLFSVR 177
>ZFIN|ZDB-GENE-060825-164 [details] [associations]
symbol:gabrr2a "gamma-aminobutyric acid (GABA) A
receptor, rho 2a" species:7955 "Danio rerio" [GO:0004890 "GABA-A
receptor activity" evidence=IEA] [GO:0005230 "extracellular
ligand-gated ion channel activity" evidence=IEA] [GO:0006811 "ion
transport" evidence=IEA] [GO:0016020 "membrane" evidence=IEA]
[GO:0016021 "integral to membrane" evidence=IEA] [GO:0006810
"transport" evidence=IEA] [GO:0045211 "postsynaptic membrane"
evidence=IEA] [GO:0030054 "cell junction" evidence=IEA] [GO:0005886
"plasma membrane" evidence=IEA] [GO:0045202 "synapse" evidence=IEA]
InterPro:IPR006028 InterPro:IPR006029 InterPro:IPR006201
InterPro:IPR006202 InterPro:IPR008057 InterPro:IPR008059
InterPro:IPR018000 Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252
PRINTS:PR00253 PRINTS:PR01670 PRINTS:PR01672 PROSITE:PS00236
ZFIN:ZDB-GENE-060825-164 GO:GO:0016021 GO:GO:0005886 GO:GO:0030054
GO:GO:0045211 GO:GO:0005230 GO:GO:0004890 Gene3D:2.70.170.10
PANTHER:PTHR18945 SUPFAM:SSF90112 SUPFAM:SSF63712
TIGRFAMs:TIGR00860 GeneTree:ENSGT00630000089571 EMBL:CR759878
IPI:IPI00920044 ProteinModelPortal:F1QX34
Ensembl:ENSDART00000130881 Bgee:F1QX34 Uniprot:F1QX34
Length = 475
Score = 220 (82.5 bits), Expect = 4.6e-26, Sum P(2) = 4.6e-26
Identities = 48/114 (42%), Positives = 68/114 (59%)
Query: 91 FSTRSRAYMYSS------LTLTFILNRQYGFYLMDFYAPSILLVCISWVSFWMAPDAVPG 144
F T SR YSS L + F L R F+L+ Y P+ L+V +SWVSFW+ AVP
Sbjct: 238 FHTTSRLAFYSSTGWYNRLYINFTLRRHIFFFLLQTYFPATLMVMLSWVSFWIDRRAVPA 297
Query: 145 RTILGASTMLTFFQLGIETGSSLPNVSYIRSNDVWFFACTVFIFLSLAEFAFVN 198
R LG +T+LT + +S+P VSYI++ D++ + VF+FLS+ E+A VN
Sbjct: 298 RVSLGITTVLTMSTIITGVNASMPRVSYIKAVDIYLWVSFVFVFLSVLEYAAVN 351
Score = 103 (41.3 bits), Expect = 4.6e-26, Sum P(2) = 4.6e-26
Identities = 19/77 (24%), Positives = 39/77 (50%)
Query: 18 EFKVQLLLQLHWKDPRLEYRHYAPHITEMVGERNFIQNIWTPHIYLTNERDSLVLGLYRR 77
+F + L L+ +WKD RL + M + ++ IW P ++ + + S +
Sbjct: 102 DFTMTLYLRHYWKDERLSFTSSTNK--SMTFDGRLVKKIWVPDVFFVHSKRSFIHDTTTE 159
Query: 78 DMLVSILPDGDMLFSTR 94
++++ + PDG +L+S R
Sbjct: 160 NIMLRVFPDGHVLYSLR 176
>UNIPROTKB|Q75NA5 [details] [associations]
symbol:Rdl "Gamma-aminobutyric acid receptor subunit beta"
species:7370 "Musca domestica" [GO:0001505 "regulation of
neurotransmitter levels" evidence=ISS] [GO:0006836
"neurotransmitter transport" evidence=ISS] [GO:0007214
"gamma-aminobutyric acid signaling pathway" evidence=ISS]
[GO:0008503 "benzodiazepine receptor activity" evidence=ISS]
[GO:0030285 "integral to synaptic vesicle membrane" evidence=ISS]
InterPro:IPR002289 InterPro:IPR006028 InterPro:IPR006029
InterPro:IPR006201 InterPro:IPR006202 InterPro:IPR018000
Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252 PRINTS:PR00253
PRINTS:PR01160 PROSITE:PS00236 GO:GO:0005886 GO:GO:0030285
GO:GO:0030054 GO:GO:0045211 GO:GO:0005230 GO:GO:0004890
Gene3D:2.70.170.10 PANTHER:PTHR18945 SUPFAM:SSF90112
SUPFAM:SSF63712 TIGRFAMs:TIGR00860 GO:GO:0007214 GO:GO:0006836
GO:GO:0034707 GO:GO:0005254 GO:GO:0001505 GO:GO:0008503 HSSP:P23415
EMBL:AB177547 EMBL:AF070935 ProteinModelPortal:Q75NA5
BindingDB:Q75NA5 ChEMBL:CHEMBL3986 DrugBank:DB00431 Uniprot:Q75NA5
Length = 576
Score = 220 (82.5 bits), Expect = 8.9e-26, Sum P(2) = 8.9e-26
Identities = 44/98 (44%), Positives = 59/98 (60%)
Query: 100 YSSLTLTFILNRQYGFYLMDFYAPSILLVCISWVSFWMAPDAVPGRTILGASTMLTFFQL 159
YS L R G+YL+ Y PS L+V ISWVSFW+ +A P R LG +T+LT L
Sbjct: 252 YSRLACEIQFVRSMGYYLIQIYIPSGLIVVISWVSFWLNRNATPARVALGVTTVLTMTTL 311
Query: 160 GIETGSSLPNVSYIRSNDVWFFACTVFIFLSLAEFAFV 197
T ++LP +SY++S DV+ C V +F SL E+A V
Sbjct: 312 MSSTNAALPKISYVKSIDVYLGTCFVMVFASLLEYATV 349
Score = 104 (41.7 bits), Expect = 8.9e-26, Sum P(2) = 8.9e-26
Identities = 24/70 (34%), Positives = 35/70 (50%)
Query: 1 MSATSKLVDIGNLS-FQQEFKVQLLLQLHWKDPRLEYRHYAPHITEMVGERNFIQNIWTP 59
+ T ++ I +LS + +F + + W DPRL YR T VG FI+NIW P
Sbjct: 83 VGVTMYVLSISSLSEVKMDFTLDFYFRQFWTDPRLAYRKRPGVETLSVGSE-FIKNIWVP 141
Query: 60 HIYLTNERDS 69
+ NE+ S
Sbjct: 142 DTFFVNEKQS 151
>WB|WBGene00001592 [details] [associations]
symbol:glc-2 species:6239 "Caenorhabditis elegans"
[GO:0006811 "ion transport" evidence=IEA] [GO:0016021 "integral to
membrane" evidence=IEA] [GO:0016020 "membrane" evidence=IEA]
[GO:0005230 "extracellular ligand-gated ion channel activity"
evidence=IEA] [GO:0006810 "transport" evidence=IEA] [GO:0045211
"postsynaptic membrane" evidence=IEA] [GO:0009792 "embryo
development ending in birth or egg hatching" evidence=IMP]
InterPro:IPR006028 InterPro:IPR006029 InterPro:IPR006201
InterPro:IPR006202 InterPro:IPR018000 Pfam:PF02931 Pfam:PF02932
PRINTS:PR00252 PRINTS:PR00253 PROSITE:PS00236 GO:GO:0005886
GO:GO:0009792 GO:GO:0030054 GO:GO:0045211 GO:GO:0005230
Gene3D:2.70.170.10 PANTHER:PTHR18945 SUPFAM:SSF90112
SUPFAM:SSF63712 TIGRFAMs:TIGR00860 GO:GO:0034707 GO:GO:0005254
GeneTree:ENSGT00630000089685 HSSP:P23415 eggNOG:NOG265706
HOGENOM:HOG000231336 EMBL:U14525 EMBL:FO080262 PIR:S50865
RefSeq:NP_491470.1 UniGene:Cel.19753 ProteinModelPortal:Q17328
SMR:Q17328 DIP:DIP-27494N MINT:MINT-1047253 PaxDb:Q17328
EnsemblMetazoa:F25F8.2 GeneID:172103 KEGG:cel:CELE_F25F8.2
UCSC:F25F8.2 CTD:172103 WormBase:F25F8.2 InParanoid:Q17328
KO:K05273 OMA:NIMIRML BindingDB:Q17328 ChEMBL:CHEMBL5527
DrugBank:DB00602 NextBio:874023 Uniprot:Q17328
Length = 434
Score = 226 (84.6 bits), Expect = 1.0e-25, Sum P(2) = 1.0e-25
Identities = 40/99 (40%), Positives = 61/99 (61%)
Query: 100 YSSLTLTFILNRQYGFYLMDFYAPSILLVCISWVSFWMAPDAVPGRTILGASTMLTFFQL 159
Y L + + RQ+ +YL+ YAP+ ++V +SWVSFW+ + GR LG +T+LT +
Sbjct: 232 YGCLRMQLLFKRQFSYYLVQLYAPTTMIVIVSWVSFWIDLHSTAGRVALGVTTLLTMTTM 291
Query: 160 GIETGSSLPNVSYIRSNDVWFFACTVFIFLSLAEFAFVN 198
+ LP VSY++ DVW AC F+F +L E+AFV+
Sbjct: 292 QSAINAKLPPVSYVKVVDVWLGACQTFVFGALLEYAFVS 330
Score = 91 (37.1 bits), Expect = 1.0e-25, Sum P(2) = 1.0e-25
Identities = 25/90 (27%), Positives = 44/90 (48%)
Query: 8 VDIGNLSFQQEFKVQLLLQLHWKDPRLEYRH---YAPHITEMVGERNFIQNIWTPHIYLT 64
+D+ N+ E+ +QL + W DPRL Y + Y P V +++W P +
Sbjct: 71 IDVVNM----EYSIQLTFREQWIDPRLAYENLGFYNPPAFLTVPHVK--KSLWIPDTFFP 124
Query: 65 NERDSLVLGLYRRDMLVSILPDGDMLFSTR 94
E+ + + +M + I PDG +L+S+R
Sbjct: 125 TEKAAHRHLIDMENMFLRIYPDGKILYSSR 154
>UNIPROTKB|A8MPY1 [details] [associations]
symbol:GABRR3 "Gamma-aminobutyric acid receptor subunit
rho-3" species:9606 "Homo sapiens" [GO:0005230 "extracellular
ligand-gated ion channel activity" evidence=IEA] [GO:0005254
"chloride channel activity" evidence=IEA] [GO:0030054 "cell
junction" evidence=IEA] [GO:0034707 "chloride channel complex"
evidence=IEA] [GO:0019904 "protein domain specific binding"
evidence=IEA] [GO:0045211 "postsynaptic membrane" evidence=IEA]
[GO:0007214 "gamma-aminobutyric acid signaling pathway"
evidence=NAS] [GO:0007268 "synaptic transmission" evidence=NAS;TAS]
[GO:0004890 "GABA-A receptor activity" evidence=NAS] [GO:0005575
"cellular_component" evidence=ND] [GO:0005886 "plasma membrane"
evidence=TAS] [GO:0034220 "ion transmembrane transport"
evidence=TAS] [GO:0055085 "transmembrane transport" evidence=TAS]
Reactome:REACT_13685 Reactome:REACT_15518 InterPro:IPR006028
InterPro:IPR006029 InterPro:IPR006201 InterPro:IPR006202
InterPro:IPR018000 Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252
PRINTS:PR00253 PROSITE:PS00236 GO:GO:0005886 GO:GO:0007268
GO:GO:0030054 GO:GO:0045211 GO:GO:0005230 GO:GO:0004890
Gene3D:2.70.170.10 PANTHER:PTHR18945 SUPFAM:SSF90112
SUPFAM:SSF63712 TIGRFAMs:TIGR00860 GO:GO:0034220 GO:GO:0007214
GO:GO:0034707 GO:GO:0005254 HOVERGEN:HBG051707 eggNOG:NOG77438
KO:K05190 EMBL:AC026100 EMBL:Y18994 IPI:IPI00879466
RefSeq:NP_001099050.1 UniGene:Hs.534578 ProteinModelPortal:A8MPY1
SMR:A8MPY1 PhosphoSite:A8MPY1 PRIDE:A8MPY1 GeneID:200959
KEGG:hsa:200959 CTD:200959 GeneCards:GC03M097705 HGNC:HGNC:17969
neXtProt:NX_A8MPY1 PharmGKB:PA134952133 BindingDB:A8MPY1
ChEMBL:CHEMBL2394 GenomeRNAi:200959 NextBio:90035 CleanEx:HS_GABRR3
Genevestigator:A8MPY1 Uniprot:A8MPY1
Length = 467
Score = 222 (83.2 bits), Expect = 1.1e-25, Sum P(2) = 1.1e-25
Identities = 41/99 (41%), Positives = 66/99 (66%)
Query: 100 YSSLTLTFILNRQYGFYLMDFYAPSILLVCISWVSFWMAPDAVPGRTILGASTMLTFFQL 159
Y+ L + F+L R F+++ Y P+IL+V +SWVSFW+ AVP R LG +T+LT +
Sbjct: 254 YNRLFINFVLRRHVFFFVLQTYFPAILMVMLSWVSFWIDRRAVPARVSLGITTVLTMSTI 313
Query: 160 GIETGSSLPNVSYIRSNDVWFFACTVFIFLSLAEFAFVN 198
+S+P VSY+++ DV+ + ++F+FLS+ E+A VN
Sbjct: 314 ITAVSASMPQVSYLKAVDVYLWVSSLFVFLSVIEYAAVN 352
Score = 97 (39.2 bits), Expect = 1.1e-25, Sum P(2) = 1.1e-25
Identities = 20/77 (25%), Positives = 38/77 (49%)
Query: 18 EFKVQLLLQLHWKDPRLEYRHYAPHITEMVGERNFIQNIWTPHIYLTNERDSLVLGLYRR 77
+F + L+ +WKD RL + A M + + IW P I+ + + S +
Sbjct: 103 DFTMTFYLRHYWKDERLSFPSTANK--SMTFDHRLTRKIWVPDIFFVHSKRSFIHDTTME 160
Query: 78 DMLVSILPDGDMLFSTR 94
++++ + PDG++L S R
Sbjct: 161 NIMLRVHPDGNVLLSLR 177
>UNIPROTKB|Q9BLY8 [details] [associations]
symbol:Rdl "Gamma-aminobutyric acid receptor subunit beta"
species:7240 "Drosophila simulans" [GO:0006811 "ion transport"
evidence=ISS] [GO:0007268 "synaptic transmission" evidence=ISS]
[GO:0030594 "neurotransmitter receptor activity" evidence=ISS]
InterPro:IPR002289 InterPro:IPR006028 InterPro:IPR006029
InterPro:IPR006201 InterPro:IPR006202 InterPro:IPR018000
Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252 PRINTS:PR00253
PRINTS:PR01160 PROSITE:PS00236 GO:GO:0005886 GO:GO:0030594
GO:GO:0030054 GO:GO:0045211 GO:GO:0005230 GO:GO:0004890
Gene3D:2.70.170.10 PANTHER:PTHR18945 SUPFAM:SSF90112
SUPFAM:SSF63712 TIGRFAMs:TIGR00860 GO:GO:0006811 GO:GO:0034707
GO:GO:0005254 OrthoDB:EOG44B8HM EMBL:AY017266
ProteinModelPortal:Q9BLY8 FlyBase:FBgn0012851 Uniprot:Q9BLY8
Length = 606
Score = 220 (82.5 bits), Expect = 1.1e-25, Sum P(2) = 1.1e-25
Identities = 44/98 (44%), Positives = 59/98 (60%)
Query: 100 YSSLTLTFILNRQYGFYLMDFYAPSILLVCISWVSFWMAPDAVPGRTILGASTMLTFFQL 159
YS L R G+YL+ Y PS L+V ISWVSFW+ +A P R LG +T+LT L
Sbjct: 254 YSRLACEIQFVRSMGYYLIQIYIPSGLIVVISWVSFWLNRNATPARVALGVTTVLTMTTL 313
Query: 160 GIETGSSLPNVSYIRSNDVWFFACTVFIFLSLAEFAFV 197
T ++LP +SY++S DV+ C V +F SL E+A V
Sbjct: 314 MSSTNAALPKISYVKSIDVYLGTCFVMVFASLLEYATV 351
Score = 104 (41.7 bits), Expect = 1.1e-25, Sum P(2) = 1.1e-25
Identities = 24/70 (34%), Positives = 35/70 (50%)
Query: 1 MSATSKLVDIGNLS-FQQEFKVQLLLQLHWKDPRLEYRHYAPHITEMVGERNFIQNIWTP 59
+ T ++ I +LS + +F + + W DPRL YR T VG FI+NIW P
Sbjct: 85 VGVTMYVLSISSLSEVKMDFTLDFYFRQFWTDPRLAYRKRPGVETLSVGSE-FIKNIWVP 143
Query: 60 HIYLTNERDS 69
+ NE+ S
Sbjct: 144 DTFFVNEKQS 153
>UNIPROTKB|B7ZBQ7 [details] [associations]
symbol:GABRR1 "Gamma-aminobutyric acid receptor subunit
rho-1" species:9606 "Homo sapiens" [GO:0005230 "extracellular
ligand-gated ion channel activity" evidence=IEA] [GO:0005886
"plasma membrane" evidence=IEA] [GO:0016021 "integral to membrane"
evidence=IEA] [GO:0030054 "cell junction" evidence=IEA] [GO:0045211
"postsynaptic membrane" evidence=IEA] InterPro:IPR006028
InterPro:IPR006029 InterPro:IPR006201 InterPro:IPR006202
InterPro:IPR018000 Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252
PRINTS:PR00253 PROSITE:PS00236 GO:GO:0016021 GO:GO:0005886
GO:GO:0030054 GO:GO:0045211 GO:GO:0005230 Gene3D:2.70.170.10
PANTHER:PTHR18945 SUPFAM:SSF90112 SUPFAM:SSF63712
TIGRFAMs:TIGR00860 HOVERGEN:HBG051707 EMBL:AL353659 EMBL:AL353135
UniGene:Hs.99927 GeneID:2569 KEGG:hsa:2569 CTD:2569 HGNC:HGNC:4090
KO:K05190 GenomeRNAi:2569 GO:GO:0016917 IPI:IPI00940134
RefSeq:NP_001243633.1 RefSeq:NP_001254511.1 SMR:B7ZBQ7
STRING:B7ZBQ7 Ensembl:ENST00000369451 Uniprot:B7ZBQ7
Length = 392
Score = 215 (80.7 bits), Expect = 1.3e-25, Sum P(2) = 1.3e-25
Identities = 42/99 (42%), Positives = 63/99 (63%)
Query: 100 YSSLTLTFILNRQYGFYLMDFYAPSILLVCISWVSFWMAPDAVPGRTILGASTMLTFFQL 159
Y+ L + F L R F+L+ Y P+ L+V +SWVSFW+ AVP R LG +T+LT +
Sbjct: 181 YNRLYINFTLRRHIFFFLLQTYFPATLMVMLSWVSFWIDRRAVPARVPLGITTVLTMSTI 240
Query: 160 GIETGSSLPNVSYIRSNDVWFFACTVFIFLSLAEFAFVN 198
+S+P VSYI++ D++ + VF+FLS+ E+A VN
Sbjct: 241 ITGVNASMPRVSYIKAVDIYLWVSFVFVFLSVLEYAAVN 279
Score = 99 (39.9 bits), Expect = 1.3e-25, Sum P(2) = 1.3e-25
Identities = 19/77 (24%), Positives = 41/77 (53%)
Query: 18 EFKVQLLLQLHWKDPRLEYRHYAPHITEMVGERNFIQNIWTPHIYLTNERDSLVLGLYRR 77
+F + L L+ +WKD RL + + + M + ++ IW P ++ + + S +
Sbjct: 30 DFTMTLYLRHYWKDERLSFP--STNNLSMTFDGRLVKKIWVPDMFFVHSKRSFIHDTTTD 87
Query: 78 DMLVSILPDGDMLFSTR 94
++++ + PDG +L+S R
Sbjct: 88 NVMLRVQPDGKVLYSLR 104
>UNIPROTKB|E1BCQ5 [details] [associations]
symbol:GABRR1 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0045211 "postsynaptic membrane" evidence=IEA]
[GO:0030054 "cell junction" evidence=IEA] [GO:0016021 "integral to
membrane" evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0005230 "extracellular ligand-gated ion channel activity"
evidence=IEA] InterPro:IPR006028 InterPro:IPR006029
InterPro:IPR006201 InterPro:IPR006202 InterPro:IPR018000
Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252 PRINTS:PR00253
PROSITE:PS00236 GO:GO:0016021 GO:GO:0005886 GO:GO:0030054
GO:GO:0045211 GO:GO:0005230 Gene3D:2.70.170.10 PANTHER:PTHR18945
SUPFAM:SSF90112 SUPFAM:SSF63712 TIGRFAMs:TIGR00860
GeneTree:ENSGT00630000089571 OMA:RMMVQLA EMBL:DAAA02026450
IPI:IPI00714608 Ensembl:ENSBTAT00000015496 Uniprot:E1BCQ5
Length = 422
Score = 215 (80.7 bits), Expect = 2.2e-25, Sum P(2) = 2.2e-25
Identities = 42/99 (42%), Positives = 63/99 (63%)
Query: 100 YSSLTLTFILNRQYGFYLMDFYAPSILLVCISWVSFWMAPDAVPGRTILGASTMLTFFQL 159
Y+ L + F L R F+L+ Y P+ L+V +SWVSFW+ AVP R LG +T+LT +
Sbjct: 211 YNRLYINFTLRRHIFFFLLQTYFPATLMVMLSWVSFWIDRRAVPARVPLGITTVLTMSTI 270
Query: 160 GIETGSSLPNVSYIRSNDVWFFACTVFIFLSLAEFAFVN 198
+S+P VSYI++ D++ + VF+FLS+ E+A VN
Sbjct: 271 ITGVNASMPRVSYIKAVDIYLWVSFVFVFLSVLEYAAVN 309
Score = 99 (39.9 bits), Expect = 2.2e-25, Sum P(2) = 2.2e-25
Identities = 19/77 (24%), Positives = 41/77 (53%)
Query: 18 EFKVQLLLQLHWKDPRLEYRHYAPHITEMVGERNFIQNIWTPHIYLTNERDSLVLGLYRR 77
+F + L L+ +WKD RL + + + M + ++ IW P ++ + + S +
Sbjct: 60 DFTMTLYLRHYWKDERLSFP--STNNLSMTFDGRLVKKIWVPDMFFVHSKRSFIHDTTTD 117
Query: 78 DMLVSILPDGDMLFSTR 94
++++ + PDG +L+S R
Sbjct: 118 NVMLRVQPDGKVLYSLR 134
>UNIPROTKB|F1S0D1 [details] [associations]
symbol:GABRR1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0045211 "postsynaptic membrane" evidence=IEA]
[GO:0030054 "cell junction" evidence=IEA] [GO:0016021 "integral to
membrane" evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0005230 "extracellular ligand-gated ion channel activity"
evidence=IEA] InterPro:IPR006028 InterPro:IPR006029
InterPro:IPR006201 InterPro:IPR006202 InterPro:IPR018000
Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252 PRINTS:PR00253
PROSITE:PS00236 GO:GO:0016021 GO:GO:0005886 GO:GO:0030054
GO:GO:0045211 GO:GO:0005230 Gene3D:2.70.170.10 PANTHER:PTHR18945
SUPFAM:SSF90112 SUPFAM:SSF63712 TIGRFAMs:TIGR00860
GeneTree:ENSGT00630000089571 OMA:RMMVQLA EMBL:CU075926
Ensembl:ENSSSCT00000004771 Uniprot:F1S0D1
Length = 422
Score = 215 (80.7 bits), Expect = 2.2e-25, Sum P(2) = 2.2e-25
Identities = 42/99 (42%), Positives = 63/99 (63%)
Query: 100 YSSLTLTFILNRQYGFYLMDFYAPSILLVCISWVSFWMAPDAVPGRTILGASTMLTFFQL 159
Y+ L + F L R F+L+ Y P+ L+V +SWVSFW+ AVP R LG +T+LT +
Sbjct: 211 YNRLYINFTLRRHIFFFLLQTYFPATLMVMLSWVSFWIDRRAVPARVPLGITTVLTMSTI 270
Query: 160 GIETGSSLPNVSYIRSNDVWFFACTVFIFLSLAEFAFVN 198
+S+P VSYI++ D++ + VF+FLS+ E+A VN
Sbjct: 271 ITGVNASMPRVSYIKAVDIYLWVSFVFVFLSVLEYAAVN 309
Score = 99 (39.9 bits), Expect = 2.2e-25, Sum P(2) = 2.2e-25
Identities = 19/77 (24%), Positives = 41/77 (53%)
Query: 18 EFKVQLLLQLHWKDPRLEYRHYAPHITEMVGERNFIQNIWTPHIYLTNERDSLVLGLYRR 77
+F + L L+ +WKD RL + + + M + ++ IW P ++ + + S +
Sbjct: 60 DFTMTLYLRHYWKDERLSFP--STNNLSMTFDGRLVKKIWVPDMFFVHSKRSFIHDTTTD 117
Query: 78 DMLVSILPDGDMLFSTR 94
++++ + PDG +L+S R
Sbjct: 118 NVMLRVQPDGKVLYSLR 134
>UNIPROTKB|P24046 [details] [associations]
symbol:GABRR1 "Gamma-aminobutyric acid receptor subunit
rho-1" species:9606 "Homo sapiens" [GO:0004890 "GABA-A receptor
activity" evidence=IEA] [GO:0005230 "extracellular ligand-gated ion
channel activity" evidence=IEA] [GO:0005254 "chloride channel
activity" evidence=IEA] [GO:0030054 "cell junction" evidence=IEA]
[GO:0034707 "chloride channel complex" evidence=IEA] [GO:0045211
"postsynaptic membrane" evidence=IEA] [GO:0005887 "integral to
plasma membrane" evidence=TAS] [GO:0006810 "transport"
evidence=TAS] [GO:0007214 "gamma-aminobutyric acid signaling
pathway" evidence=TAS] [GO:0005886 "plasma membrane" evidence=TAS]
[GO:0007268 "synaptic transmission" evidence=TAS] [GO:0034220 "ion
transmembrane transport" evidence=TAS] [GO:0055085 "transmembrane
transport" evidence=TAS] Reactome:REACT_13685 Reactome:REACT_15518
InterPro:IPR006028 InterPro:IPR006029 InterPro:IPR006201
InterPro:IPR006202 InterPro:IPR008057 InterPro:IPR008058
InterPro:IPR018000 Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252
PRINTS:PR00253 PRINTS:PR01670 PRINTS:PR01671 PROSITE:PS00236
GO:GO:0005887 GO:GO:0007268 GO:GO:0030054 GO:GO:0045211
GO:GO:0005230 GO:GO:0004890 Gene3D:2.70.170.10 PANTHER:PTHR18945
SUPFAM:SSF90112 SUPFAM:SSF63712 TIGRFAMs:TIGR00860 GO:GO:0034220
GO:GO:0007214 GO:GO:0034707 GO:GO:0005254 DrugBank:DB00466
HOVERGEN:HBG051707 eggNOG:NOG77438 HOGENOM:HOG000231335 EMBL:M62400
EMBL:AK296124 EMBL:AL353659 EMBL:AL353135 EMBL:BC130344
IPI:IPI00747264 IPI:IPI00921480 PIR:A38627 RefSeq:NP_001243632.1
RefSeq:NP_002033.2 UniGene:Hs.99927 ProteinModelPortal:P24046
SMR:P24046 IntAct:P24046 STRING:P24046 PhosphoSite:P24046
DMDM:223590210 PRIDE:P24046 DNASU:2569 Ensembl:ENST00000435811
Ensembl:ENST00000454853 GeneID:2569 KEGG:hsa:2569 UCSC:uc003pna.2
UCSC:uc011dzv.1 CTD:2569 GeneCards:GC06M089944 HGNC:HGNC:4090
MIM:137161 neXtProt:NX_P24046 PharmGKB:PA28505 InParanoid:P24046
KO:K05190 OMA:RMMVQLA OrthoDB:EOG4RJG1G BindingDB:P24046
ChEMBL:CHEMBL3561 GenomeRNAi:2569 NextBio:10161 ArrayExpress:P24046
Bgee:P24046 CleanEx:HS_GABRR1 Genevestigator:P24046
GermOnline:ENSG00000146276 Uniprot:P24046
Length = 479
Score = 215 (80.7 bits), Expect = 4.6e-25, Sum P(2) = 4.6e-25
Identities = 42/99 (42%), Positives = 63/99 (63%)
Query: 100 YSSLTLTFILNRQYGFYLMDFYAPSILLVCISWVSFWMAPDAVPGRTILGASTMLTFFQL 159
Y+ L + F L R F+L+ Y P+ L+V +SWVSFW+ AVP R LG +T+LT +
Sbjct: 268 YNRLYINFTLRRHIFFFLLQTYFPATLMVMLSWVSFWIDRRAVPARVPLGITTVLTMSTI 327
Query: 160 GIETGSSLPNVSYIRSNDVWFFACTVFIFLSLAEFAFVN 198
+S+P VSYI++ D++ + VF+FLS+ E+A VN
Sbjct: 328 ITGVNASMPRVSYIKAVDIYLWVSFVFVFLSVLEYAAVN 366
Score = 99 (39.9 bits), Expect = 4.6e-25, Sum P(2) = 4.6e-25
Identities = 19/77 (24%), Positives = 41/77 (53%)
Query: 18 EFKVQLLLQLHWKDPRLEYRHYAPHITEMVGERNFIQNIWTPHIYLTNERDSLVLGLYRR 77
+F + L L+ +WKD RL + + + M + ++ IW P ++ + + S +
Sbjct: 117 DFTMTLYLRHYWKDERLSFP--STNNLSMTFDGRLVKKIWVPDMFFVHSKRSFIHDTTTD 174
Query: 78 DMLVSILPDGDMLFSTR 94
++++ + PDG +L+S R
Sbjct: 175 NVMLRVQPDGKVLYSLR 191
>MGI|MGI:95625 [details] [associations]
symbol:Gabrr1 "gamma-aminobutyric acid (GABA) C receptor,
subunit rho 1" species:10090 "Mus musculus" [GO:0004890 "GABA-A
receptor activity" evidence=IEA] [GO:0005216 "ion channel activity"
evidence=IEA] [GO:0005230 "extracellular ligand-gated ion channel
activity" evidence=IEA] [GO:0005254 "chloride channel activity"
evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0006810 "transport" evidence=IEA] [GO:0006811 "ion transport"
evidence=IEA] [GO:0006821 "chloride transport" evidence=IEA]
[GO:0016020 "membrane" evidence=IEA] [GO:0016021 "integral to
membrane" evidence=IEA] [GO:0016917 "GABA receptor activity"
evidence=ISO] [GO:0019904 "protein domain specific binding"
evidence=ISO] [GO:0030054 "cell junction" evidence=IEA] [GO:0034707
"chloride channel complex" evidence=IEA] [GO:0042803 "protein
homodimerization activity" evidence=ISO] [GO:0045202 "synapse"
evidence=IEA] [GO:0045211 "postsynaptic membrane" evidence=IEA]
[GO:0046982 "protein heterodimerization activity" evidence=ISO]
InterPro:IPR006028 InterPro:IPR006029 InterPro:IPR006201
InterPro:IPR006202 InterPro:IPR008057 InterPro:IPR008058
InterPro:IPR018000 Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252
PRINTS:PR00253 PRINTS:PR01670 PRINTS:PR01671 PROSITE:PS00236
MGI:MGI:95625 GO:GO:0005886 GO:GO:0030054 GO:GO:0045211
GO:GO:0005230 GO:GO:0004890 Gene3D:2.70.170.10 PANTHER:PTHR18945
SUPFAM:SSF90112 SUPFAM:SSF63712 TIGRFAMs:TIGR00860 GO:GO:0034707
GO:GO:0005254 HOVERGEN:HBG051707 eggNOG:NOG77438
HOGENOM:HOG000231335 GeneTree:ENSGT00630000089571 CTD:2569
KO:K05190 OrthoDB:EOG4RJG1G EMBL:AF024620 EMBL:AL670464
IPI:IPI00113785 RefSeq:NP_032101.3 UniGene:Mm.14116
ProteinModelPortal:P56475 SMR:P56475 STRING:P56475
PhosphoSite:P56475 PRIDE:P56475 Ensembl:ENSMUST00000029947
GeneID:14408 KEGG:mmu:14408 UCSC:uc008sfr.1 InParanoid:A3KG51
ChEMBL:CHEMBL2790 NextBio:285981 Bgee:P56475 Genevestigator:P56475
GermOnline:ENSMUSG00000028280 Uniprot:P56475
Length = 480
Score = 215 (80.7 bits), Expect = 4.6e-25, Sum P(2) = 4.6e-25
Identities = 42/99 (42%), Positives = 63/99 (63%)
Query: 100 YSSLTLTFILNRQYGFYLMDFYAPSILLVCISWVSFWMAPDAVPGRTILGASTMLTFFQL 159
Y+ L + F L R F+L+ Y P+ L+V +SWVSFW+ AVP R LG +T+LT +
Sbjct: 269 YNRLYINFTLRRHIFFFLLQTYFPATLMVMLSWVSFWIDRRAVPARVPLGITTVLTMSTI 328
Query: 160 GIETGSSLPNVSYIRSNDVWFFACTVFIFLSLAEFAFVN 198
+S+P VSYI++ D++ + VF+FLS+ E+A VN
Sbjct: 329 ITGVNASMPRVSYIKAVDIYLWVSFVFVFLSVLEYAAVN 367
Score = 99 (39.9 bits), Expect = 4.6e-25, Sum P(2) = 4.6e-25
Identities = 19/77 (24%), Positives = 41/77 (53%)
Query: 18 EFKVQLLLQLHWKDPRLEYRHYAPHITEMVGERNFIQNIWTPHIYLTNERDSLVLGLYRR 77
+F + L L+ +WKD RL + + + M + ++ IW P ++ + + S +
Sbjct: 118 DFTMTLYLRHYWKDERLSFP--SSNNLSMTFDGRLVKKIWVPDMFFVHSKRSFIHDTTTD 175
Query: 78 DMLVSILPDGDMLFSTR 94
++++ + PDG +L+S R
Sbjct: 176 NVMLRVQPDGKVLYSLR 192
>RGD|61900 [details] [associations]
symbol:Gabrr1 "gamma-aminobutyric acid (GABA) A receptor, rho 1"
species:10116 "Rattus norvegicus" [GO:0004890 "GABA-A receptor
activity" evidence=IEA] [GO:0005230 "extracellular ligand-gated ion
channel activity" evidence=IEA] [GO:0005254 "chloride channel
activity" evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0007601 "visual perception" evidence=NAS] [GO:0016021 "integral
to membrane" evidence=IEA] [GO:0016917 "GABA receptor activity"
evidence=IDA] [GO:0019904 "protein domain specific binding"
evidence=IPI] [GO:0030054 "cell junction" evidence=IEA] [GO:0034707
"chloride channel complex" evidence=IEA] [GO:0042803 "protein
homodimerization activity" evidence=IDA] [GO:0045211 "postsynaptic
membrane" evidence=IEA] [GO:0046982 "protein heterodimerization
activity" evidence=IDA] InterPro:IPR006028 InterPro:IPR006029
InterPro:IPR006201 InterPro:IPR006202 InterPro:IPR008057
InterPro:IPR008058 InterPro:IPR018000 Pfam:PF02931 Pfam:PF02932
PRINTS:PR00252 PRINTS:PR00253 PRINTS:PR01670 PRINTS:PR01671
PROSITE:PS00236 RGD:61900 GO:GO:0005886 GO:GO:0042803 GO:GO:0030054
GO:GO:0045211 GO:GO:0005230 GO:GO:0004890 Gene3D:2.70.170.10
PANTHER:PTHR18945 SUPFAM:SSF90112 SUPFAM:SSF63712 TIGRFAMs:TIGR00860
GO:GO:0007601 GO:GO:0046982 GO:GO:0034707 GO:GO:0005254
HOVERGEN:HBG051707 eggNOG:NOG77438 HOGENOM:HOG000231335 KO:K05190
OrthoDB:EOG4RJG1G EMBL:U21070 EMBL:X95579 IPI:IPI00199471
UniGene:Rn.33552 ProteinModelPortal:P50572 STRING:P50572
PhosphoSite:P50572 PRIDE:P50572 KEGG:rno:29694 UCSC:RGD:61900
InParanoid:P50572 BindingDB:P50572 ChEMBL:CHEMBL3588 NextBio:610090
ArrayExpress:P50572 Genevestigator:P50572
GermOnline:ENSRNOG00000007603 GO:GO:0016917 Uniprot:P50572
Length = 480
Score = 215 (80.7 bits), Expect = 4.6e-25, Sum P(2) = 4.6e-25
Identities = 42/99 (42%), Positives = 63/99 (63%)
Query: 100 YSSLTLTFILNRQYGFYLMDFYAPSILLVCISWVSFWMAPDAVPGRTILGASTMLTFFQL 159
Y+ L + F L R F+L+ Y P+ L+V +SWVSFW+ AVP R LG +T+LT +
Sbjct: 269 YNRLYINFTLRRHIFFFLLQTYFPATLMVMLSWVSFWIDRRAVPARVPLGITTVLTMSTI 328
Query: 160 GIETGSSLPNVSYIRSNDVWFFACTVFIFLSLAEFAFVN 198
+S+P VSYI++ D++ + VF+FLS+ E+A VN
Sbjct: 329 ITGVNASMPRVSYIKAVDIYLWVSFVFVFLSVLEYAAVN 367
Score = 99 (39.9 bits), Expect = 4.6e-25, Sum P(2) = 4.6e-25
Identities = 19/77 (24%), Positives = 41/77 (53%)
Query: 18 EFKVQLLLQLHWKDPRLEYRHYAPHITEMVGERNFIQNIWTPHIYLTNERDSLVLGLYRR 77
+F + L L+ +WKD RL + + + M + ++ IW P ++ + + S +
Sbjct: 118 DFTMTLYLRHYWKDERLSFP--STNNLSMTFDGRLVKKIWVPDMFFVHSKRSFIHDTTTD 175
Query: 78 DMLVSILPDGDMLFSTR 94
++++ + PDG +L+S R
Sbjct: 176 NVMLRVQPDGKVLYSLR 192
>UNIPROTKB|P50572 [details] [associations]
symbol:Gabrr1 "Gamma-aminobutyric acid receptor subunit
rho-1" species:10116 "Rattus norvegicus" [GO:0004890 "GABA-A
receptor activity" evidence=IEA] [GO:0005230 "extracellular
ligand-gated ion channel activity" evidence=IEA] [GO:0030054 "cell
junction" evidence=IEA] InterPro:IPR006028 InterPro:IPR006029
InterPro:IPR006201 InterPro:IPR006202 InterPro:IPR008057
InterPro:IPR008058 InterPro:IPR018000 Pfam:PF02931 Pfam:PF02932
PRINTS:PR00252 PRINTS:PR00253 PRINTS:PR01670 PRINTS:PR01671
PROSITE:PS00236 RGD:61900 GO:GO:0005886 GO:GO:0042803 GO:GO:0030054
GO:GO:0045211 GO:GO:0005230 GO:GO:0004890 Gene3D:2.70.170.10
PANTHER:PTHR18945 SUPFAM:SSF90112 SUPFAM:SSF63712
TIGRFAMs:TIGR00860 GO:GO:0007601 GO:GO:0046982 GO:GO:0034707
GO:GO:0005254 HOVERGEN:HBG051707 eggNOG:NOG77438
HOGENOM:HOG000231335 KO:K05190 OrthoDB:EOG4RJG1G EMBL:U21070
EMBL:X95579 IPI:IPI00199471 UniGene:Rn.33552
ProteinModelPortal:P50572 STRING:P50572 PhosphoSite:P50572
PRIDE:P50572 KEGG:rno:29694 UCSC:RGD:61900 InParanoid:P50572
BindingDB:P50572 ChEMBL:CHEMBL3588 NextBio:610090
ArrayExpress:P50572 Genevestigator:P50572
GermOnline:ENSRNOG00000007603 GO:GO:0016917 Uniprot:P50572
Length = 480
Score = 215 (80.7 bits), Expect = 4.6e-25, Sum P(2) = 4.6e-25
Identities = 42/99 (42%), Positives = 63/99 (63%)
Query: 100 YSSLTLTFILNRQYGFYLMDFYAPSILLVCISWVSFWMAPDAVPGRTILGASTMLTFFQL 159
Y+ L + F L R F+L+ Y P+ L+V +SWVSFW+ AVP R LG +T+LT +
Sbjct: 269 YNRLYINFTLRRHIFFFLLQTYFPATLMVMLSWVSFWIDRRAVPARVPLGITTVLTMSTI 328
Query: 160 GIETGSSLPNVSYIRSNDVWFFACTVFIFLSLAEFAFVN 198
+S+P VSYI++ D++ + VF+FLS+ E+A VN
Sbjct: 329 ITGVNASMPRVSYIKAVDIYLWVSFVFVFLSVLEYAAVN 367
Score = 99 (39.9 bits), Expect = 4.6e-25, Sum P(2) = 4.6e-25
Identities = 19/77 (24%), Positives = 41/77 (53%)
Query: 18 EFKVQLLLQLHWKDPRLEYRHYAPHITEMVGERNFIQNIWTPHIYLTNERDSLVLGLYRR 77
+F + L L+ +WKD RL + + + M + ++ IW P ++ + + S +
Sbjct: 118 DFTMTLYLRHYWKDERLSFP--STNNLSMTFDGRLVKKIWVPDMFFVHSKRSFIHDTTTD 175
Query: 78 DMLVSILPDGDMLFSTR 94
++++ + PDG +L+S R
Sbjct: 176 NVMLRVQPDGKVLYSLR 192
>FB|FBgn0004244 [details] [associations]
symbol:Rdl "Resistant to dieldrin" species:7227 "Drosophila
melanogaster" [GO:0005886 "plasma membrane" evidence=ISS]
[GO:0046682 "response to cyclodiene" evidence=NAS] [GO:0004890
"GABA-A receptor activity" evidence=IEA;NAS;TAS] [GO:0016021
"integral to membrane" evidence=IEA;NAS] [GO:0050805 "negative
regulation of synaptic transmission" evidence=IMP] [GO:0005230
"extracellular ligand-gated ion channel activity" evidence=IEA]
[GO:0045211 "postsynaptic membrane" evidence=IEA] [GO:0006811 "ion
transport" evidence=IEA] [GO:0009612 "response to mechanical
stimulus" evidence=IGI] [GO:0030424 "axon" evidence=IDA]
[GO:0030425 "dendrite" evidence=IDA] [GO:0090328 "regulation of
olfactory learning" evidence=IMP] [GO:0030431 "sleep" evidence=IMP]
[GO:0042749 "regulation of circadian sleep/wake cycle"
evidence=IMP] InterPro:IPR002289 InterPro:IPR006028
InterPro:IPR006029 InterPro:IPR006201 InterPro:IPR006202
InterPro:IPR018000 Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252
PRINTS:PR00253 PRINTS:PR01160 PROSITE:PS00236 GO:GO:0016021
GO:GO:0005886 EMBL:AE014296 GO:GO:0009612 GO:GO:0030431
GO:GO:0030594 GO:GO:0030054 GO:GO:0045211 GO:GO:0005230
GO:GO:0004890 Gene3D:2.70.170.10 PANTHER:PTHR18945 SUPFAM:SSF90112
SUPFAM:SSF63712 TIGRFAMs:TIGR00860 GO:GO:0030424 GO:GO:0006811
GO:GO:0030425 GO:GO:0050805 GO:GO:0034707 GO:GO:0005254
GeneTree:ENSGT00630000089685 EMBL:M69057 EMBL:U02042 EMBL:AY051418
EMBL:S61113 PIR:A41145 RefSeq:NP_523991.2 RefSeq:NP_729461.1
RefSeq:NP_729462.2 ProteinModelPortal:P25123 SMR:P25123
STRING:P25123 PaxDb:P25123 EnsemblMetazoa:FBtr0076536 GeneID:39054
KEGG:dme:Dmel_CG10537 CTD:39054 FlyBase:FBgn0004244
eggNOG:NOG265706 InParanoid:P25123 KO:K05195 OMA:GGMFGDV
OrthoDB:EOG44B8HM PhylomeDB:P25123 ChiTaRS:Rdl GenomeRNAi:39054
NextBio:811688 Bgee:P25123 GermOnline:CG10537 GO:GO:0042749
GO:GO:0090328 Uniprot:P25123
Length = 606
Score = 220 (82.5 bits), Expect = 4.6e-25, Sum P(2) = 4.6e-25
Identities = 44/98 (44%), Positives = 59/98 (60%)
Query: 100 YSSLTLTFILNRQYGFYLMDFYAPSILLVCISWVSFWMAPDAVPGRTILGASTMLTFFQL 159
YS L R G+YL+ Y PS L+V ISWVSFW+ +A P R LG +T+LT L
Sbjct: 254 YSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALGVTTVLTMTTL 313
Query: 160 GIETGSSLPNVSYIRSNDVWFFACTVFIFLSLAEFAFV 197
T ++LP +SY++S DV+ C V +F SL E+A V
Sbjct: 314 MSSTNAALPKISYVKSIDVYLGTCFVMVFASLLEYATV 351
Score = 98 (39.6 bits), Expect = 4.6e-25, Sum P(2) = 4.6e-25
Identities = 23/70 (32%), Positives = 34/70 (48%)
Query: 1 MSATSKLVDIGNLS-FQQEFKVQLLLQLHWKDPRLEYRHYAPHITEMVGERNFIQNIWTP 59
+ T ++ I ++S +F + + W DPRL YR T VG FI+NIW P
Sbjct: 85 VGVTMYVLSISSVSEVLMDFTLDFYFRQFWTDPRLAYRKRPGVETLSVGSE-FIKNIWVP 143
Query: 60 HIYLTNERDS 69
+ NE+ S
Sbjct: 144 DTFFVNEKQS 153
>WB|WBGene00010275 [details] [associations]
symbol:acc-1 species:6239 "Caenorhabditis elegans"
[GO:0006811 "ion transport" evidence=IEA] [GO:0016021 "integral to
membrane" evidence=IEA] [GO:0016020 "membrane" evidence=IEA]
[GO:0005230 "extracellular ligand-gated ion channel activity"
evidence=IEA] [GO:0006810 "transport" evidence=IEA] [GO:0045211
"postsynaptic membrane" evidence=IEA] InterPro:IPR006028
InterPro:IPR006029 InterPro:IPR006201 InterPro:IPR006202
InterPro:IPR018000 Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252
PRINTS:PR00253 PROSITE:PS00236 GO:GO:0016021 GO:GO:0005886
GO:GO:0030054 GO:GO:0045211 GO:GO:0005230 Gene3D:2.70.170.10
PANTHER:PTHR18945 SUPFAM:SSF90112 SUPFAM:SSF63712
GeneTree:ENSGT00540000070314 HOGENOM:HOG000016259 EMBL:Z68217
PIR:T22947 RefSeq:NP_501715.1 ProteinModelPortal:Q21005 SMR:Q21005
PaxDb:Q21005 EnsemblMetazoa:F58G6.4 GeneID:177799
KEGG:cel:CELE_F58G6.4 UCSC:F58G6.4 CTD:177799 WormBase:F58G6.4
eggNOG:NOG264158 InParanoid:Q21005 OMA:MELEQPY NextBio:898434
Uniprot:Q21005
Length = 466
Score = 234 (87.4 bits), Expect = 4.7e-25, Sum P(2) = 4.7e-25
Identities = 50/126 (39%), Positives = 79/126 (62%)
Query: 84 LPDGDML-FSTRSRAYMYSS-----LTLTFILNRQYGFYLMDFYAPSILLVCISWVSFWM 137
LPD ++ FS + MY + LT+ F+ R+YG+Y++ Y P+++ + ISW+SF++
Sbjct: 204 LPDFKLVNFSVIAVEQMYPAGWWDELTVAFVFERRYGWYVLQGYIPTMVTIVISWISFYL 263
Query: 138 APDAVPGRTILGASTMLTF-FQLGIETGSSLPNVSYIRSNDVWFFACTVFIFLSLAEFAF 196
P A+P RT+LG +++L FQ G +LP VSY+++ DVW + +FIFLSL E A
Sbjct: 264 GPRAIPARTMLGVNSLLAMTFQFG-NIIRNLPRVSYVKAIDVWMLSGMLFIFLSLLELAV 322
Query: 197 VNTIWR 202
V + R
Sbjct: 323 VGFMSR 328
Score = 78 (32.5 bits), Expect = 4.7e-25, Sum P(2) = 4.7e-25
Identities = 15/80 (18%), Positives = 37/80 (46%)
Query: 17 QEFKVQLLLQLHWKDPRLEYRHYAPHITEMVGERNFIQNIWTPHIYLTNERDSLVLGLYR 76
Q+F++ L + W+DP L Y P + + +Q +W P+ N + + +
Sbjct: 74 QDFEIDLYINEFWEDPALVYEDMNPCKRNISFDDKVLQRLWLPNTCFINSKSAAIHESPF 133
Query: 77 RDMLVSILPDGDMLFSTRSR 96
+++ + + +G + + R +
Sbjct: 134 KNVFLMVFSNGTLWTNYRMK 153
>WB|WBGene00009799 [details] [associations]
symbol:lgc-47 species:6239 "Caenorhabditis elegans"
[GO:0006811 "ion transport" evidence=IEA] [GO:0016021 "integral to
membrane" evidence=IEA] [GO:0016020 "membrane" evidence=IEA]
[GO:0005230 "extracellular ligand-gated ion channel activity"
evidence=IEA] [GO:0006810 "transport" evidence=IEA] [GO:0045211
"postsynaptic membrane" evidence=IEA] InterPro:IPR006028
InterPro:IPR006029 InterPro:IPR006201 InterPro:IPR006202
InterPro:IPR018000 Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252
PRINTS:PR00253 PROSITE:PS00236 GO:GO:0016021 GO:GO:0005886
GO:GO:0030054 GO:GO:0045211 GO:GO:0005230 Gene3D:2.70.170.10
PANTHER:PTHR18945 SUPFAM:SSF90112 SUPFAM:SSF63712
GeneTree:ENSGT00540000070314 EMBL:Z49888 EMBL:Z47069
UniGene:Cel.6333 GeneID:181193 KEGG:cel:CELE_F47A4.1 CTD:181193
NextBio:912842 RefSeq:NP_741878.1 ProteinModelPortal:G5EEX8
SMR:G5EEX8 EnsemblMetazoa:F47A4.1b WormBase:F47A4.1b OMA:GCANDTE
Uniprot:G5EEX8
Length = 428
Score = 220 (82.5 bits), Expect = 9.3e-25, Sum P(2) = 9.3e-25
Identities = 48/126 (38%), Positives = 73/126 (57%)
Query: 84 LPDGDML-FSTRSRAYMY-----SSLTLTFILNRQYGFYLMDFYAPSILLVCISWVSFWM 137
LPD M FST ++ +Y S L + F+ R+ G+YL+ Y P+ + V ISW+ F++
Sbjct: 230 LPDFTMTNFSTSNKFQLYAAGYWSELNVNFLFRRRSGWYLLQGYIPTYMTVFISWIPFYL 289
Query: 138 APDAVPGRTILGASTMLTF-FQLGIETGSSLPNVSYIRSNDVWFFACTVFIFLSLAEFAF 196
P A+P RT++G + +L FQ G +LP VSYI++ DVW + F+F SL E A
Sbjct: 290 GPKAIPARTMIGVNALLALTFQFG-NIIRNLPRVSYIKAIDVWMLSGICFVFASLFELAT 348
Query: 197 VNTIWR 202
+ + R
Sbjct: 349 IGFLMR 354
Score = 88 (36.0 bits), Expect = 9.3e-25, Sum P(2) = 9.3e-25
Identities = 19/81 (23%), Positives = 40/81 (49%)
Query: 17 QEFKVQLLLQLHWKDPRLEYRHYAPHITEMVGERNFIQNIWTPHIYLTNERDSLVLGLYR 76
Q+F++ L + +W DP L Y P + + +QNIWTP+ N + + +
Sbjct: 101 QDFEIDLYMNEYWTDPGLAYDILNPCQGNLSFDWAVMQNIWTPNTCFINSKKAQLHSSPF 160
Query: 77 RDMLVSILPDGDMLFSTRSRA 97
++ + + P+G + + R ++
Sbjct: 161 TNVFLMVFPNGSVWSNWRIKS 181
>UNIPROTKB|E1BE96 [details] [associations]
symbol:GABRA6 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0045211 "postsynaptic membrane" evidence=IEA]
[GO:0030054 "cell junction" evidence=IEA] [GO:0016021 "integral to
membrane" evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0005230 "extracellular ligand-gated ion channel activity"
evidence=IEA] [GO:0004890 "GABA-A receptor activity" evidence=IEA]
[GO:0007214 "gamma-aminobutyric acid signaling pathway"
evidence=IEA] [GO:0006821 "chloride transport" evidence=IEA]
InterPro:IPR001390 InterPro:IPR005436 InterPro:IPR006028
InterPro:IPR006029 InterPro:IPR006201 InterPro:IPR006202
InterPro:IPR018000 Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252
PRINTS:PR00253 PRINTS:PR01079 PRINTS:PR01619 PROSITE:PS00236
GO:GO:0016021 GO:GO:0005886 GO:GO:0030054 GO:GO:0045211
GO:GO:0005230 GO:GO:0004890 Gene3D:2.70.170.10 PANTHER:PTHR18945
SUPFAM:SSF90112 SUPFAM:SSF63712 TIGRFAMs:TIGR00860 GO:GO:0007214
GO:GO:0006821 KO:K05175 GeneTree:ENSGT00550000074441 CTD:2559
OMA:HSDSKYH EMBL:DAAA02020909 EMBL:DAAA02020910 IPI:IPI00704287
RefSeq:NP_001137557.1 UniGene:Bt.39107 ProteinModelPortal:E1BE96
Ensembl:ENSBTAT00000017637 GeneID:539194 KEGG:bta:539194
NextBio:20877838 Uniprot:E1BE96
Length = 453
Score = 218 (81.8 bits), Expect = 3.6e-24, Sum P(2) = 3.6e-24
Identities = 45/106 (42%), Positives = 64/106 (60%)
Query: 94 RSRAYMYSSLTLTFILNRQYGFYLMDFYAPSILLVCISWVSFWMAPDAVPGRTILGASTM 153
+S Y +T+ F L R+ G++++ Y P I+ V +S VSFW+ ++VP RT+ G +T+
Sbjct: 221 KSNTGEYVIMTVYFHLQRKMGYFMIQIYTPCIMTVILSQVSFWINKESVPARTVFGITTV 280
Query: 154 LTFFQLGIETGSSLPNVSYIRSNDVWFFA-CTVFIFLSLAEFAFVN 198
LT L I SLP VSY + D WF A C F+F +L EFA VN
Sbjct: 281 LTMTTLSISARHSLPKVSYATAMD-WFIAVCFAFVFSALIEFAAVN 325
Score = 86 (35.3 bits), Expect = 3.6e-24, Sum P(2) = 3.6e-24
Identities = 20/80 (25%), Positives = 40/80 (50%)
Query: 16 QQEFKVQLLLQLHWKDPRLEYRHYAPHITEMVGERNF-IQNIWTPHIYLTNERDSLVLGL 74
+ E+ + + + W D RL++ P TE++ N + IWTP + N + S+ +
Sbjct: 74 EMEYTMDVFFRQTWTDERLKFG--GP--TEILSLNNLMVSKIWTPDTFFRNGKKSIAHNM 129
Query: 75 YRRDMLVSILPDGDMLFSTR 94
+ L I+ +G +L++ R
Sbjct: 130 TTPNKLFRIMQNGTILYTMR 149
>UNIPROTKB|Q16445 [details] [associations]
symbol:GABRA6 "Gamma-aminobutyric acid receptor subunit
alpha-6" species:9606 "Homo sapiens" [GO:0004890 "GABA-A receptor
activity" evidence=IEA] [GO:0005230 "extracellular ligand-gated ion
channel activity" evidence=IEA] [GO:0007214 "gamma-aminobutyric
acid signaling pathway" evidence=IEA] [GO:0005254 "chloride channel
activity" evidence=IEA] [GO:0030054 "cell junction" evidence=IEA]
[GO:0034707 "chloride channel complex" evidence=IEA] [GO:0045211
"postsynaptic membrane" evidence=IEA] [GO:0006810 "transport"
evidence=TAS] [GO:0005887 "integral to plasma membrane"
evidence=TAS] [GO:0007165 "signal transduction" evidence=TAS]
[GO:0008503 "benzodiazepine receptor activity" evidence=TAS]
[GO:0005886 "plasma membrane" evidence=TAS] [GO:0007268 "synaptic
transmission" evidence=TAS] [GO:0034220 "ion transmembrane
transport" evidence=TAS] [GO:0055085 "transmembrane transport"
evidence=TAS] Reactome:REACT_13685 Reactome:REACT_15518
InterPro:IPR001390 InterPro:IPR005436 InterPro:IPR006028
InterPro:IPR006029 InterPro:IPR006201 InterPro:IPR006202
InterPro:IPR018000 Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252
PRINTS:PR00253 PRINTS:PR01079 PRINTS:PR01619 PROSITE:PS00236
GO:GO:0005887 EMBL:CH471062 GO:GO:0008144 GO:GO:0030054
GO:GO:0045211 GO:GO:0004890 Gene3D:2.70.170.10 PANTHER:PTHR18945
SUPFAM:SSF90112 SUPFAM:SSF63712 TIGRFAMs:TIGR00860 GO:GO:0034220
GO:GO:0007214 GO:GO:0030425 GO:GO:0042734 GO:GO:0043083
GO:GO:0043235 GO:GO:0032809 GO:GO:0034707 GO:GO:0005254
DrugBank:DB00186 GO:GO:0051932 DrugBank:DB00683 DrugBank:DB01544
DrugBank:DB00404 KO:K05175 eggNOG:NOG238757 HOGENOM:HOG000231337
HOVERGEN:HBG051707 DrugBank:DB00189 DrugBank:DB00690
DrugBank:DB00371 GO:GO:0008503 GO:GO:0005237 OrthoDB:EOG4MPHQ4
CTD:2559 OMA:HSDSKYH EMBL:S81944 EMBL:AK289461 EMBL:BC096241
EMBL:BC096242 EMBL:BC099640 EMBL:BC099641 IPI:IPI00002215
RefSeq:NP_000802.2 UniGene:Hs.90791 ProteinModelPortal:Q16445
SMR:Q16445 STRING:Q16445 PhosphoSite:Q16445 DMDM:126302548
PRIDE:Q16445 Ensembl:ENST00000274545 GeneID:2559 KEGG:hsa:2559
UCSC:uc003lyu.2 GeneCards:GC05P161045 H-InvDB:HIX0005382
HGNC:HGNC:4080 MIM:137143 neXtProt:NX_Q16445 PharmGKB:PA28494
InParanoid:Q16445 PhylomeDB:Q16445 BindingDB:Q16445
ChEMBL:CHEMBL2579 GenomeRNAi:2559 NextBio:10107 ArrayExpress:Q16445
Bgee:Q16445 CleanEx:HS_GABRA6 Genevestigator:Q16445
GermOnline:ENSG00000145863 GO:GO:0022851 Uniprot:Q16445
Length = 453
Score = 218 (81.8 bits), Expect = 3.6e-24, Sum P(2) = 3.6e-24
Identities = 45/106 (42%), Positives = 64/106 (60%)
Query: 94 RSRAYMYSSLTLTFILNRQYGFYLMDFYAPSILLVCISWVSFWMAPDAVPGRTILGASTM 153
+S Y +T+ F L R+ G++++ Y P I+ V +S VSFW+ ++VP RT+ G +T+
Sbjct: 221 KSNTGEYVIMTVYFHLQRKMGYFMIQIYTPCIMTVILSQVSFWINKESVPARTVFGITTV 280
Query: 154 LTFFQLGIETGSSLPNVSYIRSNDVWFFA-CTVFIFLSLAEFAFVN 198
LT L I SLP VSY + D WF A C F+F +L EFA VN
Sbjct: 281 LTMTTLSISARHSLPKVSYATAMD-WFIAVCFAFVFSALIEFAAVN 325
Score = 86 (35.3 bits), Expect = 3.6e-24, Sum P(2) = 3.6e-24
Identities = 20/80 (25%), Positives = 40/80 (50%)
Query: 16 QQEFKVQLLLQLHWKDPRLEYRHYAPHITEMVGERNF-IQNIWTPHIYLTNERDSLVLGL 74
+ E+ + + + W D RL++ P TE++ N + IWTP + N + S+ +
Sbjct: 74 EMEYTMDVFFRQTWTDERLKFG--GP--TEILSLNNLMVSKIWTPDTFFRNGKKSIAHNM 129
Query: 75 YRRDMLVSILPDGDMLFSTR 94
+ L I+ +G +L++ R
Sbjct: 130 TTPNKLFRIMQNGTILYTMR 149
>UNIPROTKB|F1RR70 [details] [associations]
symbol:GABRA6 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0045211 "postsynaptic membrane" evidence=IEA]
[GO:0030054 "cell junction" evidence=IEA] [GO:0016021 "integral to
membrane" evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0005230 "extracellular ligand-gated ion channel activity"
evidence=IEA] [GO:0004890 "GABA-A receptor activity" evidence=IEA]
InterPro:IPR001390 InterPro:IPR006028 InterPro:IPR006029
InterPro:IPR006201 InterPro:IPR006202 InterPro:IPR018000
Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252 PRINTS:PR00253
PRINTS:PR01079 PROSITE:PS00236 GO:GO:0016021 GO:GO:0005886
GO:GO:0030054 GO:GO:0045211 GO:GO:0005230 GO:GO:0004890
Gene3D:2.70.170.10 PANTHER:PTHR18945 SUPFAM:SSF90112
SUPFAM:SSF63712 TIGRFAMs:TIGR00860 GeneTree:ENSGT00550000074441
OMA:HSDSKYH EMBL:FP016136 Ensembl:ENSSSCT00000018539 Uniprot:F1RR70
Length = 442
Score = 221 (82.9 bits), Expect = 3.7e-24, Sum P(2) = 3.7e-24
Identities = 45/106 (42%), Positives = 65/106 (61%)
Query: 94 RSRAYMYSSLTLTFILNRQYGFYLMDFYAPSILLVCISWVSFWMAPDAVPGRTILGASTM 153
+S Y+ +T+ F L R+ G++++ Y P I+ V +S VSFW+ ++VP RT+ G +T+
Sbjct: 208 KSNTGEYAIMTVYFHLQRKMGYFMIQIYTPCIMTVILSQVSFWINKESVPARTVFGITTV 267
Query: 154 LTFFQLGIETGSSLPNVSYIRSNDVWFFA-CTVFIFLSLAEFAFVN 198
LT L I SLP VSY + D WF A C F+F +L EFA VN
Sbjct: 268 LTMTTLSISARHSLPKVSYATAMD-WFIAVCFAFVFSALIEFAAVN 312
Score = 82 (33.9 bits), Expect = 3.7e-24, Sum P(2) = 3.7e-24
Identities = 19/81 (23%), Positives = 40/81 (49%)
Query: 16 QQEFKVQLLLQLHWKDPRLEYRHYAPHITEMVGERNF-IQNIWTPHIYLTNERDSLVLGL 74
+ E+ + + + W D RL++ P E++ N + IWTP + N + S+ +
Sbjct: 65 EMEYTMDVFFRQTWTDERLKFG--GP--AEILSLNNLMVSKIWTPDTFFRNGKKSIAHNM 120
Query: 75 YRRDMLVSILPDGDMLFSTRS 95
+ L I+ +G +L++ R+
Sbjct: 121 TTPNKLFRIMQNGTILYTMRA 141
>UNIPROTKB|Q90845 [details] [associations]
symbol:GABRA6 "Gamma-aminobutyric acid receptor subunit
alpha-6" species:9031 "Gallus gallus" [GO:0004890 "GABA-A receptor
activity" evidence=IEA] [GO:0005230 "extracellular ligand-gated ion
channel activity" evidence=IEA] [GO:0007214 "gamma-aminobutyric
acid signaling pathway" evidence=IEA] [GO:0005254 "chloride channel
activity" evidence=IEA] [GO:0030054 "cell junction" evidence=IEA]
[GO:0034707 "chloride channel complex" evidence=IEA] [GO:0005886
"plasma membrane" evidence=IEA] [GO:0045211 "postsynaptic membrane"
evidence=IEA] InterPro:IPR001390 InterPro:IPR005436
InterPro:IPR006028 InterPro:IPR006029 InterPro:IPR006201
InterPro:IPR006202 InterPro:IPR018000 Pfam:PF02931 Pfam:PF02932
PRINTS:PR00252 PRINTS:PR00253 PRINTS:PR01079 PRINTS:PR01619
PROSITE:PS00236 GO:GO:0005886 GO:GO:0030054 GO:GO:0045211
GO:GO:0005230 GO:GO:0004890 Gene3D:2.70.170.10 PANTHER:PTHR18945
SUPFAM:SSF90112 SUPFAM:SSF63712 TIGRFAMs:TIGR00860 GO:GO:0007214
GO:GO:0034707 GO:GO:0005254 KO:K05175 eggNOG:NOG238757
GeneTree:ENSGT00550000074441 HOGENOM:HOG000231337
HOVERGEN:HBG051707 OrthoDB:EOG4MPHQ4 EMBL:X94343 IPI:IPI00571969
RefSeq:NP_990389.1 UniGene:Gga.550 ProteinModelPortal:Q90845
SMR:Q90845 Ensembl:ENSGALT00000002601 GeneID:395931 KEGG:gga:395931
CTD:2559 InParanoid:Q90845 OMA:HSDSKYH NextBio:20815996
Uniprot:Q90845
Length = 465
Score = 218 (81.8 bits), Expect = 6.7e-24, Sum P(2) = 6.7e-24
Identities = 45/106 (42%), Positives = 64/106 (60%)
Query: 94 RSRAYMYSSLTLTFILNRQYGFYLMDFYAPSILLVCISWVSFWMAPDAVPGRTILGASTM 153
+S Y +T+ F L R+ G++++ Y P I+ V +S VSFW+ ++VP RT+ G +T+
Sbjct: 221 KSNTGEYVIMTVYFHLQRKMGYFMIQIYTPCIMTVILSQVSFWINKESVPARTVFGITTV 280
Query: 154 LTFFQLGIETGSSLPNVSYIRSNDVWFFA-CTVFIFLSLAEFAFVN 198
LT L I SLP VSY + D WF A C F+F +L EFA VN
Sbjct: 281 LTMTTLSISARHSLPKVSYATAMD-WFIAVCFAFVFSALIEFAAVN 325
Score = 84 (34.6 bits), Expect = 6.7e-24, Sum P(2) = 6.7e-24
Identities = 20/80 (25%), Positives = 40/80 (50%)
Query: 16 QQEFKVQLLLQLHWKDPRLEYRHYAPHITEMVGERNF-IQNIWTPHIYLTNERDSLVLGL 74
+ E+ + + + W D RL++ P TE++ N + IWTP + N + S+ +
Sbjct: 74 EMEYTMDVFFRQTWTDERLKFG--GP--TEILRLNNLMVSKIWTPDTFFRNGKKSIAHNM 129
Query: 75 YRRDMLVSILPDGDMLFSTR 94
+ L I+ +G +L++ R
Sbjct: 130 TTPNKLFRIMQNGTILYTMR 149
>UNIPROTKB|F1LWJ7 [details] [associations]
symbol:Gabra6 "Gamma-aminobutyric acid receptor subunit
alpha-6" species:10116 "Rattus norvegicus" [GO:0004890 "GABA-A
receptor activity" evidence=IEA] [GO:0005230 "extracellular
ligand-gated ion channel activity" evidence=IEA] [GO:0005886
"plasma membrane" evidence=IEA] [GO:0006821 "chloride transport"
evidence=IEA] [GO:0007214 "gamma-aminobutyric acid signaling
pathway" evidence=IEA] [GO:0016021 "integral to membrane"
evidence=IEA] [GO:0030054 "cell junction" evidence=IEA] [GO:0045211
"postsynaptic membrane" evidence=IEA] InterPro:IPR001390
InterPro:IPR005436 InterPro:IPR006028 InterPro:IPR006029
InterPro:IPR006201 InterPro:IPR006202 InterPro:IPR018000
Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252 PRINTS:PR00253
PRINTS:PR01079 PRINTS:PR01619 PROSITE:PS00236 RGD:61861
GO:GO:0016021 GO:GO:0005886 GO:GO:0030054 GO:GO:0045211
GO:GO:0005230 GO:GO:0004890 Gene3D:2.70.170.10 PANTHER:PTHR18945
SUPFAM:SSF90112 SUPFAM:SSF63712 TIGRFAMs:TIGR00860 GO:GO:0007214
GO:GO:0006821 IPI:IPI00565653 Ensembl:ENSRNOT00000047262
ArrayExpress:F1LWJ7 Uniprot:F1LWJ7
Length = 452
Score = 218 (81.8 bits), Expect = 7.3e-24, Sum P(2) = 7.3e-24
Identities = 45/106 (42%), Positives = 64/106 (60%)
Query: 94 RSRAYMYSSLTLTFILNRQYGFYLMDFYAPSILLVCISWVSFWMAPDAVPGRTILGASTM 153
+S Y +T+ F L R+ G++++ Y P I+ V +S VSFW+ ++VP RT+ G +T+
Sbjct: 220 KSNTGEYVIMTVYFHLQRKMGYFMIQIYTPCIMTVILSQVSFWINKESVPARTVFGITTV 279
Query: 154 LTFFQLGIETGSSLPNVSYIRSNDVWFFA-CTVFIFLSLAEFAFVN 198
LT L I SLP VSY + D WF A C F+F +L EFA VN
Sbjct: 280 LTMTTLSISARHSLPKVSYATAMD-WFIAVCFAFVFSALIEFAAVN 324
Score = 83 (34.3 bits), Expect = 7.3e-24, Sum P(2) = 7.3e-24
Identities = 18/80 (22%), Positives = 40/80 (50%)
Query: 16 QQEFKVQLLLQLHWKDPRLEYRHYAPHITEMVGERNF-IQNIWTPHIYLTNERDSLVLGL 74
+ E+ + + + W D RL+++ P E++ N + IWTP + N + S+ +
Sbjct: 73 EMEYTMDVFFRQTWTDERLKFK--GP--AEILSLNNLMVSKIWTPDTFFQNGKKSIAHNM 128
Query: 75 YRRDMLVSILPDGDMLFSTR 94
+ L ++ +G +L++ R
Sbjct: 129 TTPNKLFRLMQNGTILYTMR 148
>MGI|MGI:95618 [details] [associations]
symbol:Gabra6 "gamma-aminobutyric acid (GABA) A receptor,
subunit alpha 6" species:10090 "Mus musculus" [GO:0004890 "GABA-A
receptor activity" evidence=ISO] [GO:0005216 "ion channel activity"
evidence=IEA] [GO:0005230 "extracellular ligand-gated ion channel
activity" evidence=IEA] [GO:0005237 "inhibitory extracellular
ligand-gated ion channel activity" evidence=ISO] [GO:0005254
"chloride channel activity" evidence=IEA] [GO:0005886 "plasma
membrane" evidence=IEA] [GO:0005887 "integral to plasma membrane"
evidence=ISO] [GO:0006810 "transport" evidence=IEA] [GO:0006811
"ion transport" evidence=IEA] [GO:0006821 "chloride transport"
evidence=IEA] [GO:0007214 "gamma-aminobutyric acid signaling
pathway" evidence=IEA] [GO:0008144 "drug binding" evidence=ISO]
[GO:0008503 "benzodiazepine receptor activity" evidence=ISO]
[GO:0016020 "membrane" evidence=ISO] [GO:0016021 "integral to
membrane" evidence=IEA] [GO:0022851 "GABA-gated chloride ion
channel activity" evidence=ISO] [GO:0030054 "cell junction"
evidence=IEA] [GO:0030425 "dendrite" evidence=ISO] [GO:0032809
"neuronal cell body membrane" evidence=ISO] [GO:0034707 "chloride
channel complex" evidence=IEA] [GO:0042734 "presynaptic membrane"
evidence=ISO] [GO:0043235 "receptor complex" evidence=ISO]
[GO:0045202 "synapse" evidence=IEA] [GO:0045211 "postsynaptic
membrane" evidence=ISO] [GO:0051291 "protein heterooligomerization"
evidence=ISO] [GO:0051932 "synaptic transmission, GABAergic"
evidence=ISO] InterPro:IPR001390 InterPro:IPR005436
InterPro:IPR006028 InterPro:IPR006029 InterPro:IPR006201
InterPro:IPR006202 InterPro:IPR018000 Pfam:PF02931 Pfam:PF02932
PRINTS:PR00252 PRINTS:PR00253 PRINTS:PR01079 PRINTS:PR01619
PROSITE:PS00236 MGI:MGI:95618 GO:GO:0005887 GO:GO:0008144
GO:GO:0030054 GO:GO:0045211 GO:GO:0004890 Gene3D:2.70.170.10
PANTHER:PTHR18945 SUPFAM:SSF90112 SUPFAM:SSF63712
TIGRFAMs:TIGR00860 GO:GO:0007214 GO:GO:0030425 GO:GO:0042734
GO:GO:0043083 GO:GO:0043235 GO:GO:0032809 GO:GO:0034707
GO:GO:0005254 GO:GO:0051932 KO:K05175 eggNOG:NOG238757
GeneTree:ENSGT00550000074441 HOGENOM:HOG000231337
HOVERGEN:HBG051707 GO:GO:0008503 GO:GO:0005237 OrthoDB:EOG4MPHQ4
CTD:2559 OMA:HSDSKYH GO:GO:0022851 EMBL:X51986 EMBL:U77411
EMBL:U77409 EMBL:U77410 EMBL:AF256197 EMBL:AF256198 EMBL:AK135145
EMBL:AL645823 EMBL:BC145158 EMBL:BC145702 IPI:IPI00133501
IPI:IPI00648214 IPI:IPI00857474 IPI:IPI01008575 PIR:S11396
RefSeq:NP_001093111.1 RefSeq:NP_032094.2 UniGene:Mm.4915
ProteinModelPortal:P16305 SMR:P16305 STRING:P16305
PhosphoSite:P16305 PRIDE:P16305 Ensembl:ENSMUST00000020703
Ensembl:ENSMUST00000109286 Ensembl:ENSMUST00000155218 GeneID:14399
KEGG:mmu:14399 InParanoid:Q5SUU5 BindingDB:P16305 ChEMBL:CHEMBL4710
NextBio:285939 Bgee:P16305 Genevestigator:P16305
GermOnline:ENSMUSG00000020428 Uniprot:P16305
Length = 453
Score = 218 (81.8 bits), Expect = 7.4e-24, Sum P(2) = 7.4e-24
Identities = 45/106 (42%), Positives = 64/106 (60%)
Query: 94 RSRAYMYSSLTLTFILNRQYGFYLMDFYAPSILLVCISWVSFWMAPDAVPGRTILGASTM 153
+S Y +T+ F L R+ G++++ Y P I+ V +S VSFW+ ++VP RT+ G +T+
Sbjct: 221 KSNTGEYVIMTVYFHLQRKMGYFMIQIYTPCIMTVILSQVSFWINKESVPARTVFGITTV 280
Query: 154 LTFFQLGIETGSSLPNVSYIRSNDVWFFA-CTVFIFLSLAEFAFVN 198
LT L I SLP VSY + D WF A C F+F +L EFA VN
Sbjct: 281 LTMTTLSISARHSLPKVSYATAMD-WFIAVCFAFVFSALIEFAAVN 325
Score = 83 (34.3 bits), Expect = 7.4e-24, Sum P(2) = 7.4e-24
Identities = 18/80 (22%), Positives = 40/80 (50%)
Query: 16 QQEFKVQLLLQLHWKDPRLEYRHYAPHITEMVGERNF-IQNIWTPHIYLTNERDSLVLGL 74
+ E+ + + + W D RL+++ P E++ N + IWTP + N + S+ +
Sbjct: 74 EMEYTMDVFFRQTWTDERLKFK--GP--AEILSLNNLMVSKIWTPDTFFRNGKKSIAHNM 129
Query: 75 YRRDMLVSILPDGDMLFSTR 94
+ L ++ +G +L++ R
Sbjct: 130 TTPNKLFRLMQNGTILYTMR 149
>ZFIN|ZDB-GENE-081104-30 [details] [associations]
symbol:gabra5 "gamma-aminobutyric acid (GABA) A
receptor, alpha 5" species:7955 "Danio rerio" [GO:0045211
"postsynaptic membrane" evidence=IEA] [GO:0005230 "extracellular
ligand-gated ion channel activity" evidence=IEA] [GO:0006811 "ion
transport" evidence=IEA] [GO:0016020 "membrane" evidence=IEA]
[GO:0016021 "integral to membrane" evidence=IEA] [GO:0004890
"GABA-A receptor activity" evidence=IEA] [GO:0005216 "ion channel
activity" evidence=IEA] [GO:0006810 "transport" evidence=IEA]
[GO:0030054 "cell junction" evidence=IEA] [GO:0005886 "plasma
membrane" evidence=IEA] [GO:0045202 "synapse" evidence=IEA]
InterPro:IPR001390 InterPro:IPR006028 InterPro:IPR006029
InterPro:IPR006201 InterPro:IPR006202 InterPro:IPR018000
Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252 PRINTS:PR00253
PRINTS:PR01079 PROSITE:PS00236 ZFIN:ZDB-GENE-081104-30
GO:GO:0016021 GO:GO:0005886 GO:GO:0030054 GO:GO:0045211
GO:GO:0005230 GO:GO:0004890 Gene3D:2.70.170.10 PANTHER:PTHR18945
SUPFAM:SSF90112 SUPFAM:SSF63712 TIGRFAMs:TIGR00860
GeneTree:ENSGT00550000074441 EMBL:CR405707 IPI:IPI00863519
ProteinModelPortal:F1QZ29 Ensembl:ENSDART00000104135 Uniprot:F1QZ29
Length = 491
Score = 206 (77.6 bits), Expect = 8.2e-24, Sum P(2) = 8.2e-24
Identities = 41/100 (41%), Positives = 61/100 (61%)
Query: 100 YSSLTLTFILNRQYGFYLMDFYAPSILLVCISWVSFWMAPDAVPGRTILGASTMLTFFQL 159
Y+ + F L R+ G++++ Y P + V +S VSFW+ ++VP RT+ G +T+LT L
Sbjct: 282 YTVMMAHFYLKRKIGYFVIQTYMPCFMTVILSQVSFWLNRESVPARTVFGVTTVLTMTTL 341
Query: 160 GIETGSSLPNVSYIRSNDVWFFA-CTVFIFLSLAEFAFVN 198
I +SLP V+Y + D WF A C F+F +L EFA VN
Sbjct: 342 SISARNSLPKVAYATAMD-WFIAVCYAFVFSALIEFATVN 380
Score = 97 (39.2 bits), Expect = 8.2e-24, Sum P(2) = 8.2e-24
Identities = 22/80 (27%), Positives = 41/80 (51%)
Query: 16 QQEFKVQLLLQLHWKDPRLEYRHYAPHITEMVGERNFI-QNIWTPHIYLTNERDSLVLGL 74
+ E+ + + + WKD RL ++ P EM+ N + NIWTP + N + S+ +
Sbjct: 129 EMEYTIDVFFRQSWKDERLCFK--GP--MEMLPLNNLLASNIWTPDTFFLNGKKSIAHNM 184
Query: 75 YRRDMLVSILPDGDMLFSTR 94
+ L+ + DG +L++ R
Sbjct: 185 TTPNKLLRLKDDGTLLYTMR 204
Score = 35 (17.4 bits), Expect = 2.4e-17, Sum P(2) = 2.4e-17
Identities = 13/48 (27%), Positives = 21/48 (43%)
Query: 63 LTNERDSLVLGLYRRDMLVSILPDGDMLFSTRSRAYMYSSLTLTFILN 110
+T +S L L +L IL G T+S++Y L I++
Sbjct: 13 ITAAANSAQLQLLHTIVLQEILSTGIQGLCTKSKSYALIVKQLLLIIS 60
>WB|WBGene00006784 [details] [associations]
symbol:unc-49 species:6239 "Caenorhabditis elegans"
[GO:0045211 "postsynaptic membrane" evidence=IEA;IDA] [GO:0004890
"GABA-A receptor activity" evidence=IEA] [GO:0005216 "ion channel
activity" evidence=IEA] [GO:0006811 "ion transport" evidence=IEA]
[GO:0016020 "membrane" evidence=IEA] [GO:0016021 "integral to
membrane" evidence=IEA] [GO:0005230 "extracellular ligand-gated ion
channel activity" evidence=IEA] [GO:0006810 "transport"
evidence=IEA] [GO:0007626 "locomotory behavior" evidence=IMP]
[GO:0043058 "regulation of backward locomotion" evidence=IMP]
[GO:0007214 "gamma-aminobutyric acid signaling pathway"
evidence=IMP] [GO:0031594 "neuromuscular junction" evidence=IDA]
InterPro:IPR006028 InterPro:IPR006029 InterPro:IPR006201
InterPro:IPR006202 InterPro:IPR018000 Pfam:PF02931 Pfam:PF02932
PRINTS:PR00252 PRINTS:PR00253 PROSITE:PS00236 GO:GO:0016021
GO:GO:0005886 GO:GO:0030054 GO:GO:0045211 GO:GO:0005230
Gene3D:2.70.170.10 PANTHER:PTHR18945 SUPFAM:SSF90112
SUPFAM:SSF63712 TIGRFAMs:TIGR00860 GO:GO:0007214 GO:GO:0031594
GO:GO:0007626 GO:GO:0043058 GeneTree:ENSGT00630000089685
EMBL:Z50016 UniGene:Cel.18075 GeneID:176472 KEGG:cel:CELE_T21C12.1
CTD:176472 NextBio:892718 UCSC:T21C12.1b RefSeq:NP_001022781.2
ProteinModelPortal:Q22637 SMR:Q22637 PRIDE:Q22637
EnsemblMetazoa:T21C12.1a WormBase:T21C12.1a InParanoid:Q22637
ArrayExpress:Q22637 Uniprot:Q22637
Length = 1095
Score = 248 (92.4 bits), Expect = 9.2e-24, Sum P(2) = 9.2e-24
Identities = 47/101 (46%), Positives = 64/101 (63%)
Query: 100 YSSLTLTFILNRQYGFYLMDFYAPSILLVCISWVSFWMAPDAVPGRTILGASTMLTFFQL 159
YS L F+ R GFY++ Y PS+L+V ISWVSFW++ DA P R LG +T+LT L
Sbjct: 246 YSRLCWFFLFKRNIGFYIIQIYLPSVLIVVISWVSFWLSRDATPARVALGVTTVLTMTTL 305
Query: 160 GIETGSSLPNVSYIRSNDVWFFACTVFIFLSLAEFAFVNTI 200
T SS+P VSY++S D++ C + +F SL E+A V I
Sbjct: 306 MTMTNSSMPKVSYVKSIDIFLGVCFMMVFCSLLEYAAVGYI 346
Score = 225 (84.3 bits), Expect = 2.5e-21, Sum P(2) = 2.5e-21
Identities = 47/99 (47%), Positives = 61/99 (61%)
Query: 100 YSSLTLTFILNRQYGFYLMDFYAPSILLVCISWVSFWMAPDAVPGRTILGASTMLTFFQL 159
Y L L IL R GFY M+ PSIL+V ISWVSFW+ +A P R LG +T+LT L
Sbjct: 503 YVRLALEVILVRNMGFYTMNIVIPSILIVTISWVSFWLNREASPARVGLGVTTVLTMTTL 562
Query: 160 GIETGSSLPNVSYIRSNDVWFFACTVFIFLSLAEFAFVN 198
T +S+P VSY++ DV+ C V +F SL E+A V+
Sbjct: 563 ITTTNNSMPKVSYVKGLDVFLNFCFVMVFASLLEYAIVS 601
Score = 211 (79.3 bits), Expect = 7.6e-20, Sum P(2) = 7.6e-20
Identities = 43/108 (39%), Positives = 66/108 (61%)
Query: 90 LFSTRSRAYMYSSLTLTFILNRQYGFYLMDFYAPSILLVCISWVSFWMAPDAVPGRTILG 149
L ST S Y S L ++FI +R GFY + + P+ L+V +SW+SFW+ D+ P RT++G
Sbjct: 880 LASTSSGTY--SRLRVSFIFDRDSGFYFLQIFFPASLVVVLSWISFWINRDSAPSRTLIG 937
Query: 150 ASTMLTFFQLGIETGSSLPNVSYIRSNDVWFFACTVFIFLSLAEFAFV 197
T+LT L T LP V+Y+++ DV+ C + + L+L E+A V
Sbjct: 938 TMTVLTETHLMTGTNRRLPPVAYVKAVDVFLGFCYLLVILALIEYACV 985
Score = 65 (27.9 bits), Expect = 9.2e-24, Sum P(2) = 9.2e-24
Identities = 17/81 (20%), Positives = 34/81 (41%)
Query: 18 EFKVQLLLQLHWKDPRLEYRHY----APHITEMVGERNFIQNIWTPHIYLTNERDSLVLG 73
+F + ++ W+DPRL + + I + +++ +W P + NE+ S
Sbjct: 80 DFTLDFYMRQTWQDPRLAFGSLDLGLSKEIDSLTVGVDYLDRLWKPDTFFPNEKKSFFHL 139
Query: 74 LYRRDMLVSILPDGDMLFSTR 94
+ + I DG + S R
Sbjct: 140 ATTHNSFLRIEGDGTVYTSQR 160
>UNIPROTKB|E2RSN3 [details] [associations]
symbol:GABRA6 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0045211 "postsynaptic membrane" evidence=IEA]
[GO:0030054 "cell junction" evidence=IEA] [GO:0016021 "integral to
membrane" evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0007214 "gamma-aminobutyric acid signaling pathway"
evidence=IEA] [GO:0006821 "chloride transport" evidence=IEA]
[GO:0005230 "extracellular ligand-gated ion channel activity"
evidence=IEA] [GO:0004890 "GABA-A receptor activity" evidence=IEA]
InterPro:IPR001390 InterPro:IPR005436 InterPro:IPR006028
InterPro:IPR006029 InterPro:IPR006201 InterPro:IPR006202
InterPro:IPR018000 Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252
PRINTS:PR00253 PRINTS:PR01079 PRINTS:PR01619 PROSITE:PS00236
GO:GO:0016021 GO:GO:0005886 GO:GO:0030054 GO:GO:0045211
GO:GO:0005230 GO:GO:0004890 Gene3D:2.70.170.10 PANTHER:PTHR18945
SUPFAM:SSF90112 SUPFAM:SSF63712 TIGRFAMs:TIGR00860 GO:GO:0007214
GO:GO:0006821 GeneTree:ENSGT00550000074441 OMA:HSDSKYH
EMBL:AAEX03003042 Ensembl:ENSCAFT00000027311 NextBio:20862356
Uniprot:E2RSN3
Length = 550
Score = 218 (81.8 bits), Expect = 9.3e-24, Sum P(2) = 9.3e-24
Identities = 45/106 (42%), Positives = 64/106 (60%)
Query: 94 RSRAYMYSSLTLTFILNRQYGFYLMDFYAPSILLVCISWVSFWMAPDAVPGRTILGASTM 153
+S Y +T+ F L R+ G++++ Y P I+ V +S VSFW+ ++VP RT+ G +T+
Sbjct: 238 KSNTGEYVIMTVYFHLQRKMGYFMIQIYTPCIMTVILSQVSFWINKESVPARTVFGITTV 297
Query: 154 LTFFQLGIETGSSLPNVSYIRSNDVWFFA-CTVFIFLSLAEFAFVN 198
LT L I SLP VSY + D WF A C F+F +L EFA VN
Sbjct: 298 LTMTTLSISARHSLPKVSYATAMD-WFIAVCFAFVFSALIEFAAVN 342
Score = 86 (35.3 bits), Expect = 9.3e-24, Sum P(2) = 9.3e-24
Identities = 20/80 (25%), Positives = 40/80 (50%)
Query: 16 QQEFKVQLLLQLHWKDPRLEYRHYAPHITEMVGERNF-IQNIWTPHIYLTNERDSLVLGL 74
+ E+ + + + W D RL++ P TE++ N + IWTP + N + S+ +
Sbjct: 91 EMEYTMDVFFRQTWTDERLKFG--GP--TEILSLNNLMVSKIWTPDTFFRNGKKSIAHNM 146
Query: 75 YRRDMLVSILPDGDMLFSTR 94
+ L I+ +G +L++ R
Sbjct: 147 TTPNKLFRIMQNGTILYTMR 166
>RGD|61861 [details] [associations]
symbol:Gabra6 "gamma-aminobutyric acid (GABA) A receptor, alpha 6"
species:10116 "Rattus norvegicus" [GO:0004890 "GABA-A receptor
activity" evidence=IEA;IDA] [GO:0005230 "extracellular ligand-gated
ion channel activity" evidence=IEA] [GO:0005237 "inhibitory
extracellular ligand-gated ion channel activity" evidence=IMP]
[GO:0005254 "chloride channel activity" evidence=TAS] [GO:0005886
"plasma membrane" evidence=IEA] [GO:0005887 "integral to plasma
membrane" evidence=IDA] [GO:0006821 "chloride transport"
evidence=IEA] [GO:0007214 "gamma-aminobutyric acid signaling
pathway" evidence=IEA] [GO:0008144 "drug binding" evidence=IDA]
[GO:0016020 "membrane" evidence=IDA] [GO:0016021 "integral to
membrane" evidence=IEA] [GO:0030054 "cell junction" evidence=IEA]
[GO:0030425 "dendrite" evidence=IDA] [GO:0032809 "neuronal cell body
membrane" evidence=IDA] [GO:0034707 "chloride channel complex"
evidence=IEA] [GO:0042734 "presynaptic membrane" evidence=IDA]
[GO:0043235 "receptor complex" evidence=IDA] [GO:0045211
"postsynaptic membrane" evidence=IEA;IDA] [GO:0051291 "protein
heterooligomerization" evidence=IPI] [GO:0051932 "synaptic
transmission, GABAergic" evidence=IMP] [GO:0008503 "benzodiazepine
receptor activity" evidence=IMP] [GO:0022851 "GABA-gated chloride
ion channel activity" evidence=IMP] InterPro:IPR001390
InterPro:IPR005436 InterPro:IPR006028 InterPro:IPR006029
InterPro:IPR006201 InterPro:IPR006202 InterPro:IPR018000
Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252 PRINTS:PR00253
PRINTS:PR01079 PRINTS:PR01619 PROSITE:PS00236 RGD:61861
GO:GO:0051291 GO:GO:0005887 GO:GO:0008144 GO:GO:0030054
GO:GO:0045211 GO:GO:0004890 Gene3D:2.70.170.10 PANTHER:PTHR18945
SUPFAM:SSF90112 SUPFAM:SSF63712 TIGRFAMs:TIGR00860 GO:GO:0007214
GO:GO:0030425 GO:GO:0042734 GO:GO:0043235 GO:GO:0032809
GO:GO:0034707 GO:GO:0005254 GO:GO:0051932 KO:K05175 eggNOG:NOG238757
HOGENOM:HOG000231337 HOVERGEN:HBG051707 GO:GO:0005237 CTD:2559
EMBL:L08495 EMBL:X55742 IPI:IPI00206049 PIR:S11087
RefSeq:NP_068613.1 UniGene:Rn.29890 ProteinModelPortal:P30191
SMR:P30191 STRING:P30191 GeneID:29708 KEGG:rno:29708 UCSC:RGD:61861
BindingDB:P30191 ChEMBL:CHEMBL293 NextBio:610131 ArrayExpress:P30191
Genevestigator:P30191 GermOnline:ENSRNOG00000003569 Uniprot:P30191
Length = 453
Score = 218 (81.8 bits), Expect = 9.4e-24, Sum P(2) = 9.4e-24
Identities = 45/106 (42%), Positives = 64/106 (60%)
Query: 94 RSRAYMYSSLTLTFILNRQYGFYLMDFYAPSILLVCISWVSFWMAPDAVPGRTILGASTM 153
+S Y +T+ F L R+ G++++ Y P I+ V +S VSFW+ ++VP RT+ G +T+
Sbjct: 221 KSNTGEYVIMTVYFHLQRKMGYFMIQIYTPCIMTVILSQVSFWINKESVPARTVFGITTV 280
Query: 154 LTFFQLGIETGSSLPNVSYIRSNDVWFFA-CTVFIFLSLAEFAFVN 198
LT L I SLP VSY + D WF A C F+F +L EFA VN
Sbjct: 281 LTMTTLSISARHSLPKVSYATAMD-WFIAVCFAFVFSALIEFAAVN 325
Score = 82 (33.9 bits), Expect = 9.4e-24, Sum P(2) = 9.4e-24
Identities = 18/80 (22%), Positives = 40/80 (50%)
Query: 16 QQEFKVQLLLQLHWKDPRLEYRHYAPHITEMVGERNF-IQNIWTPHIYLTNERDSLVLGL 74
+ E+ + + + W D RL+++ P E++ N + IWTP + N + S+ +
Sbjct: 74 EMEYTMDVFFRQTWTDERLKFK--GP--AEILSLNNLMVSKIWTPDTFFRNGKKSIAHNM 129
Query: 75 YRRDMLVSILPDGDMLFSTR 94
+ L ++ +G +L++ R
Sbjct: 130 TTPNKLFRLMHNGTILYTMR 149
>UNIPROTKB|P30191 [details] [associations]
symbol:Gabra6 "Gamma-aminobutyric acid receptor subunit
alpha-6" species:10116 "Rattus norvegicus" [GO:0004890 "GABA-A
receptor activity" evidence=IEA] [GO:0007214 "gamma-aminobutyric
acid signaling pathway" evidence=IEA] [GO:0030054 "cell junction"
evidence=IEA] InterPro:IPR001390 InterPro:IPR005436
InterPro:IPR006028 InterPro:IPR006029 InterPro:IPR006201
InterPro:IPR006202 InterPro:IPR018000 Pfam:PF02931 Pfam:PF02932
PRINTS:PR00252 PRINTS:PR00253 PRINTS:PR01079 PRINTS:PR01619
PROSITE:PS00236 RGD:61861 GO:GO:0051291 GO:GO:0005887 GO:GO:0008144
GO:GO:0030054 GO:GO:0045211 GO:GO:0004890 Gene3D:2.70.170.10
PANTHER:PTHR18945 SUPFAM:SSF90112 SUPFAM:SSF63712
TIGRFAMs:TIGR00860 GO:GO:0007214 GO:GO:0030425 GO:GO:0042734
GO:GO:0043235 GO:GO:0032809 GO:GO:0034707 GO:GO:0005254
GO:GO:0051932 KO:K05175 eggNOG:NOG238757 HOGENOM:HOG000231337
HOVERGEN:HBG051707 GO:GO:0005237 CTD:2559 EMBL:L08495 EMBL:X55742
IPI:IPI00206049 PIR:S11087 RefSeq:NP_068613.1 UniGene:Rn.29890
ProteinModelPortal:P30191 SMR:P30191 STRING:P30191 GeneID:29708
KEGG:rno:29708 UCSC:RGD:61861 BindingDB:P30191 ChEMBL:CHEMBL293
NextBio:610131 ArrayExpress:P30191 Genevestigator:P30191
GermOnline:ENSRNOG00000003569 Uniprot:P30191
Length = 453
Score = 218 (81.8 bits), Expect = 9.4e-24, Sum P(2) = 9.4e-24
Identities = 45/106 (42%), Positives = 64/106 (60%)
Query: 94 RSRAYMYSSLTLTFILNRQYGFYLMDFYAPSILLVCISWVSFWMAPDAVPGRTILGASTM 153
+S Y +T+ F L R+ G++++ Y P I+ V +S VSFW+ ++VP RT+ G +T+
Sbjct: 221 KSNTGEYVIMTVYFHLQRKMGYFMIQIYTPCIMTVILSQVSFWINKESVPARTVFGITTV 280
Query: 154 LTFFQLGIETGSSLPNVSYIRSNDVWFFA-CTVFIFLSLAEFAFVN 198
LT L I SLP VSY + D WF A C F+F +L EFA VN
Sbjct: 281 LTMTTLSISARHSLPKVSYATAMD-WFIAVCFAFVFSALIEFAAVN 325
Score = 82 (33.9 bits), Expect = 9.4e-24, Sum P(2) = 9.4e-24
Identities = 18/80 (22%), Positives = 40/80 (50%)
Query: 16 QQEFKVQLLLQLHWKDPRLEYRHYAPHITEMVGERNF-IQNIWTPHIYLTNERDSLVLGL 74
+ E+ + + + W D RL+++ P E++ N + IWTP + N + S+ +
Sbjct: 74 EMEYTMDVFFRQTWTDERLKFK--GP--AEILSLNNLMVSKIWTPDTFFRNGKKSIAHNM 129
Query: 75 YRRDMLVSILPDGDMLFSTR 94
+ L ++ +G +L++ R
Sbjct: 130 TTPNKLFRLMHNGTILYTMR 149
>UNIPROTKB|E7EV53 [details] [associations]
symbol:GABRA6 "Gamma-aminobutyric acid receptor subunit
alpha-6" species:9606 "Homo sapiens" [GO:0004890 "GABA-A receptor
activity" evidence=IEA] [GO:0005230 "extracellular ligand-gated ion
channel activity" evidence=IEA] [GO:0006821 "chloride transport"
evidence=IEA] [GO:0007214 "gamma-aminobutyric acid signaling
pathway" evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0016021 "integral to membrane" evidence=IEA] [GO:0030054 "cell
junction" evidence=IEA] [GO:0045211 "postsynaptic membrane"
evidence=IEA] InterPro:IPR001390 InterPro:IPR005436
InterPro:IPR006028 InterPro:IPR006029 InterPro:IPR006201
InterPro:IPR006202 InterPro:IPR018000 Pfam:PF02931 Pfam:PF02932
PRINTS:PR00252 PRINTS:PR00253 PRINTS:PR01079 PRINTS:PR01619
PROSITE:PS00236 GO:GO:0016021 GO:GO:0005886 GO:GO:0030054
GO:GO:0045211 GO:GO:0005230 GO:GO:0004890 Gene3D:2.70.170.10
PANTHER:PTHR18945 SUPFAM:SSF90112 SUPFAM:SSF63712
TIGRFAMs:TIGR00860 GO:GO:0007214 GO:GO:0006821 HGNC:HGNC:4080
EMBL:AC091989 EMBL:AC091944 IPI:IPI00984249
ProteinModelPortal:E7EV53 SMR:E7EV53 Ensembl:ENST00000523217
ArrayExpress:E7EV53 Bgee:E7EV53 Uniprot:E7EV53
Length = 443
Score = 218 (81.8 bits), Expect = 1.0e-23, Sum P(2) = 1.0e-23
Identities = 45/106 (42%), Positives = 64/106 (60%)
Query: 94 RSRAYMYSSLTLTFILNRQYGFYLMDFYAPSILLVCISWVSFWMAPDAVPGRTILGASTM 153
+S Y +T+ F L R+ G++++ Y P I+ V +S VSFW+ ++VP RT+ G +T+
Sbjct: 211 KSNTGEYVIMTVYFHLQRKMGYFMIQIYTPCIMTVILSQVSFWINKESVPARTVFGITTV 270
Query: 154 LTFFQLGIETGSSLPNVSYIRSNDVWFFA-CTVFIFLSLAEFAFVN 198
LT L I SLP VSY + D WF A C F+F +L EFA VN
Sbjct: 271 LTMTTLSISARHSLPKVSYATAMD-WFIAVCFAFVFSALIEFAAVN 315
Score = 81 (33.6 bits), Expect = 1.0e-23, Sum P(2) = 1.0e-23
Identities = 19/71 (26%), Positives = 37/71 (52%)
Query: 25 LQLHWKDPRLEYRHYAPHITEMVGERNF-IQNIWTPHIYLTNERDSLVLGLYRRDMLVSI 83
+++ W D RL++ P TE++ N + IWTP + N + S+ + + L I
Sbjct: 73 VEMTWTDERLKFG--GP--TEILSLNNLMVSKIWTPDTFFRNGKKSIAHNMTTPNKLFRI 128
Query: 84 LPDGDMLFSTR 94
+ +G +L++ R
Sbjct: 129 MQNGTILYTMR 139
>UNIPROTKB|Q08E50 [details] [associations]
symbol:GABRA5 "Gamma-aminobutyric acid receptor subunit
alpha-5" species:9913 "Bos taurus" [GO:0045211 "postsynaptic
membrane" evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0090102 "cochlea development" evidence=IEA] [GO:0060384
"innervation" evidence=IEA] [GO:0060119 "inner ear receptor cell
development" evidence=IEA] [GO:0044297 "cell body" evidence=IEA]
[GO:0030425 "dendrite" evidence=IEA] [GO:0008306 "associative
learning" evidence=IEA] [GO:0007605 "sensory perception of sound"
evidence=IEA] [GO:0001662 "behavioral fear response" evidence=IEA]
[GO:0034707 "chloride channel complex" evidence=IEA] [GO:0030054
"cell junction" evidence=IEA] [GO:0005254 "chloride channel
activity" evidence=IEA] [GO:0007214 "gamma-aminobutyric acid
signaling pathway" evidence=IEA] [GO:0005230 "extracellular
ligand-gated ion channel activity" evidence=IEA] [GO:0004890
"GABA-A receptor activity" evidence=IEA] InterPro:IPR001390
InterPro:IPR005435 InterPro:IPR006028 InterPro:IPR006029
InterPro:IPR006201 InterPro:IPR006202 InterPro:IPR018000
Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252 PRINTS:PR00253
PRINTS:PR01079 PRINTS:PR01618 PROSITE:PS00236 GO:GO:0005886
GO:GO:0030054 GO:GO:0045211 GO:GO:0005230 GO:GO:0004890
Gene3D:2.70.170.10 PANTHER:PTHR18945 SUPFAM:SSF90112
SUPFAM:SSF63712 TIGRFAMs:TIGR00860 GO:GO:0007214 GO:GO:0030425
GO:GO:0008306 GO:GO:0007605 GO:GO:0001662 GO:GO:0034707
GO:GO:0005254 GO:GO:0044297 GO:GO:0090102 GO:GO:0060119 KO:K05175
eggNOG:NOG238757 GeneTree:ENSGT00550000074441 HOGENOM:HOG000231337
HOVERGEN:HBG051707 OrthoDB:EOG4X0MSC EMBL:BC123418 IPI:IPI00701740
RefSeq:NP_001069312.1 UniGene:Bt.63027 ProteinModelPortal:Q08E50
STRING:Q08E50 PRIDE:Q08E50 Ensembl:ENSBTAT00000004397 GeneID:523515
KEGG:bta:523515 CTD:2558 InParanoid:Q08E50 OMA:IRSERIH
NextBio:20873764 GO:GO:0060384 Uniprot:Q08E50
Length = 462
Score = 216 (81.1 bits), Expect = 1.1e-23, Sum P(2) = 1.1e-23
Identities = 44/106 (41%), Positives = 65/106 (61%)
Query: 100 YSSLTLTFILNRQYGFYLMDFYAPSILLVCISWVSFWMAPDAVPGRTILGASTMLTFFQL 159
Y+ +T F L R+ G++++ Y P I+ V +S VSFW+ ++VP RT+ G +T+LT L
Sbjct: 244 YTIMTAHFHLKRKIGYFVIQTYLPCIMTVILSQVSFWLNRESVPARTVFGVTTVLTMTTL 303
Query: 160 GIETGSSLPNVSYIRSNDVWFFA-CTVFIFLSLAEFAFVNTIWRYG 204
I +SLP V+Y + D WF A C F+F +L EFA VN + G
Sbjct: 304 SISARNSLPKVAYATAMD-WFIAVCYAFVFSALIEFATVNYFTKRG 348
Score = 84 (34.6 bits), Expect = 1.1e-23, Sum P(2) = 1.1e-23
Identities = 19/80 (23%), Positives = 40/80 (50%)
Query: 16 QQEFKVQLLLQLHWKDPRLEYRHYAPHITEMVGERNFIQN-IWTPHIYLTNERDSLVLGL 74
+ E+ + + + WKD RL ++ P + + N + + IWTP + N + S+ +
Sbjct: 91 EMEYTIDVFFRQSWKDERLRFK--GP--MQRLPLNNLLASKIWTPDTFFHNGKKSIAHNM 146
Query: 75 YRRDMLVSILPDGDMLFSTR 94
+ L+ + DG +L++ R
Sbjct: 147 TTPNKLLRLEDDGTLLYTMR 166
>UNIPROTKB|P31644 [details] [associations]
symbol:GABRA5 "Gamma-aminobutyric acid receptor subunit
alpha-5" species:9606 "Homo sapiens" [GO:0005230 "extracellular
ligand-gated ion channel activity" evidence=IEA] [GO:0007214
"gamma-aminobutyric acid signaling pathway" evidence=IEA]
[GO:0005254 "chloride channel activity" evidence=IEA] [GO:0030054
"cell junction" evidence=IEA] [GO:0034707 "chloride channel
complex" evidence=IEA] [GO:0001662 "behavioral fear response"
evidence=IEA] [GO:0004890 "GABA-A receptor activity" evidence=IEA]
[GO:0007420 "brain development" evidence=IEA] [GO:0007605 "sensory
perception of sound" evidence=IEA] [GO:0008306 "associative
learning" evidence=IEA] [GO:0030425 "dendrite" evidence=IEA]
[GO:0032809 "neuronal cell body membrane" evidence=IEA] [GO:0043235
"receptor complex" evidence=IEA] [GO:0050811 "GABA receptor
binding" evidence=IEA] [GO:0060119 "inner ear receptor cell
development" evidence=IEA] [GO:0060384 "innervation" evidence=IEA]
[GO:0090102 "cochlea development" evidence=IEA] [GO:0045211
"postsynaptic membrane" evidence=IEA] [GO:0004872 "receptor
activity" evidence=TAS] [GO:0005215 "transporter activity"
evidence=TAS] [GO:0005887 "integral to plasma membrane"
evidence=TAS] [GO:0006810 "transport" evidence=TAS] [GO:0007165
"signal transduction" evidence=TAS] [GO:0005886 "plasma membrane"
evidence=TAS] [GO:0007268 "synaptic transmission" evidence=TAS]
[GO:0034220 "ion transmembrane transport" evidence=TAS] [GO:0055085
"transmembrane transport" evidence=TAS] Reactome:REACT_13685
Reactome:REACT_15518 InterPro:IPR001390 InterPro:IPR005435
InterPro:IPR006028 InterPro:IPR006029 InterPro:IPR006201
InterPro:IPR006202 InterPro:IPR018000 Pfam:PF02931 Pfam:PF02932
PRINTS:PR00252 PRINTS:PR00253 PRINTS:PR01079 PRINTS:PR01618
PROSITE:PS00236 GO:GO:0007165 GO:GO:0007420 GO:GO:0005887
GO:GO:0007268 GO:GO:0030054 GO:GO:0045211 GO:GO:0005230
GO:GO:0004890 Gene3D:2.70.170.10 PANTHER:PTHR18945 SUPFAM:SSF90112
SUPFAM:SSF63712 TIGRFAMs:TIGR00860 GO:GO:0034220 GO:GO:0007214
GO:GO:0030425 GO:GO:0004872 GO:GO:0005215 GO:GO:0008306
GO:GO:0007605 GO:GO:0032809 GO:GO:0001662 GO:GO:0034707
GO:GO:0005254 DrugBank:DB00186 GO:GO:0090102 DrugBank:DB00683
DrugBank:DB01544 DrugBank:DB00404 GO:GO:0060119 KO:K05175
eggNOG:NOG238757 HOGENOM:HOG000231337 HOVERGEN:HBG051707
DrugBank:DB00189 DrugBank:DB00690 DrugBank:DB00371
OrthoDB:EOG4X0MSC CTD:2558 GO:GO:0060384 EMBL:L08485 EMBL:AK290453
EMBL:BT009830 EMBL:BC111979 EMBL:BC113422 EMBL:AF061785
EMBL:AF228447 EMBL:AF228448 EMBL:AF228449 IPI:IPI00012471
PIR:A48933 RefSeq:NP_000801.1 RefSeq:NP_001158509.1
UniGene:Hs.24969 ProteinModelPortal:P31644 SMR:P31644 STRING:P31644
PhosphoSite:P31644 DMDM:399519 PaxDb:P31644 PRIDE:P31644 DNASU:2558
Ensembl:ENST00000335625 Ensembl:ENST00000355395
Ensembl:ENST00000400081 GeneID:2558 KEGG:hsa:2558 UCSC:uc001zbd.2
GeneCards:GC15P027112 HGNC:HGNC:4079 MIM:137142 neXtProt:NX_P31644
PharmGKB:PA28493 InParanoid:P31644 OMA:WTNGTTK PhylomeDB:P31644
BindingDB:P31644 ChEMBL:CHEMBL5112 GenomeRNAi:2558 NextBio:10103
ArrayExpress:P31644 Bgee:P31644 CleanEx:HS_GABRA5
Genevestigator:P31644 GermOnline:ENSG00000186297 Uniprot:P31644
Length = 462
Score = 216 (81.1 bits), Expect = 1.1e-23, Sum P(2) = 1.1e-23
Identities = 44/106 (41%), Positives = 65/106 (61%)
Query: 100 YSSLTLTFILNRQYGFYLMDFYAPSILLVCISWVSFWMAPDAVPGRTILGASTMLTFFQL 159
Y+ +T F L R+ G++++ Y P I+ V +S VSFW+ ++VP RT+ G +T+LT L
Sbjct: 244 YTIMTAHFHLKRKIGYFVIQTYLPCIMTVILSQVSFWLNRESVPARTVFGVTTVLTMTTL 303
Query: 160 GIETGSSLPNVSYIRSNDVWFFA-CTVFIFLSLAEFAFVNTIWRYG 204
I +SLP V+Y + D WF A C F+F +L EFA VN + G
Sbjct: 304 SISARNSLPKVAYATAMD-WFIAVCYAFVFSALIEFATVNYFTKRG 348
Score = 84 (34.6 bits), Expect = 1.1e-23, Sum P(2) = 1.1e-23
Identities = 19/80 (23%), Positives = 40/80 (50%)
Query: 16 QQEFKVQLLLQLHWKDPRLEYRHYAPHITEMVGERNFIQN-IWTPHIYLTNERDSLVLGL 74
+ E+ + + + WKD RL ++ P + + N + + IWTP + N + S+ +
Sbjct: 91 EMEYTIDVFFRQSWKDERLRFK--GP--MQRLPLNNLLASKIWTPDTFFHNGKKSIAHNM 146
Query: 75 YRRDMLVSILPDGDMLFSTR 94
+ L+ + DG +L++ R
Sbjct: 147 TTPNKLLRLEDDGTLLYTMR 166
>UNIPROTKB|E2RG38 [details] [associations]
symbol:GABRA5 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0090102 "cochlea development" evidence=IEA]
[GO:0060384 "innervation" evidence=IEA] [GO:0060119 "inner ear
receptor cell development" evidence=IEA] [GO:0044297 "cell body"
evidence=IEA] [GO:0030425 "dendrite" evidence=IEA] [GO:0008306
"associative learning" evidence=IEA] [GO:0007605 "sensory
perception of sound" evidence=IEA] [GO:0001662 "behavioral fear
response" evidence=IEA] [GO:0045211 "postsynaptic membrane"
evidence=IEA] [GO:0030054 "cell junction" evidence=IEA] [GO:0016021
"integral to membrane" evidence=IEA] [GO:0005886 "plasma membrane"
evidence=IEA] [GO:0007214 "gamma-aminobutyric acid signaling
pathway" evidence=IEA] [GO:0006821 "chloride transport"
evidence=IEA] [GO:0005230 "extracellular ligand-gated ion channel
activity" evidence=IEA] [GO:0004890 "GABA-A receptor activity"
evidence=IEA] InterPro:IPR001390 InterPro:IPR005435
InterPro:IPR006028 InterPro:IPR006029 InterPro:IPR006201
InterPro:IPR006202 InterPro:IPR018000 Pfam:PF02931 Pfam:PF02932
PRINTS:PR00252 PRINTS:PR00253 PRINTS:PR01079 PRINTS:PR01618
PROSITE:PS00236 GO:GO:0016021 GO:GO:0005886 GO:GO:0030054
GO:GO:0045211 GO:GO:0005230 GO:GO:0004890 Gene3D:2.70.170.10
PANTHER:PTHR18945 SUPFAM:SSF90112 SUPFAM:SSF63712
TIGRFAMs:TIGR00860 GO:GO:0007214 GO:GO:0030425 GO:GO:0008306
GO:GO:0007605 GO:GO:0001662 GO:GO:0044297 GO:GO:0090102
GO:GO:0006821 GO:GO:0060119 KO:K05175 GeneTree:ENSGT00550000074441
CTD:2558 GO:GO:0060384 OMA:WTNGTTK EMBL:AAEX03002173
EMBL:AAEX03002174 RefSeq:XP_545805.2 ProteinModelPortal:E2RG38
Ensembl:ENSCAFT00000015966 GeneID:488688 KEGG:cfa:488688
NextBio:20861999 Uniprot:E2RG38
Length = 463
Score = 216 (81.1 bits), Expect = 1.1e-23, Sum P(2) = 1.1e-23
Identities = 44/106 (41%), Positives = 65/106 (61%)
Query: 100 YSSLTLTFILNRQYGFYLMDFYAPSILLVCISWVSFWMAPDAVPGRTILGASTMLTFFQL 159
Y+ +T F L R+ G++++ Y P I+ V +S VSFW+ ++VP RT+ G +T+LT L
Sbjct: 244 YTIMTAHFHLKRKIGYFVIQTYLPCIMTVILSQVSFWLNRESVPARTVFGVTTVLTMTTL 303
Query: 160 GIETGSSLPNVSYIRSNDVWFFA-CTVFIFLSLAEFAFVNTIWRYG 204
I +SLP V+Y + D WF A C F+F +L EFA VN + G
Sbjct: 304 SISARNSLPKVAYATAMD-WFIAVCYAFVFSALIEFATVNYFTKRG 348
Score = 84 (34.6 bits), Expect = 1.1e-23, Sum P(2) = 1.1e-23
Identities = 19/80 (23%), Positives = 40/80 (50%)
Query: 16 QQEFKVQLLLQLHWKDPRLEYRHYAPHITEMVGERNFIQN-IWTPHIYLTNERDSLVLGL 74
+ E+ + + + WKD RL ++ P + + N + + IWTP + N + S+ +
Sbjct: 91 EMEYTIDVFFRQSWKDERLRFK--GP--MQRLPLNNLLASKIWTPDTFFHNGKKSIAHNM 146
Query: 75 YRRDMLVSILPDGDMLFSTR 94
+ L+ + DG +L++ R
Sbjct: 147 TTPNKLLRLEDDGTLLYTMR 166
>UNIPROTKB|F1SR89 [details] [associations]
symbol:GABRA5 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0090102 "cochlea development" evidence=IEA] [GO:0060384
"innervation" evidence=IEA] [GO:0060119 "inner ear receptor cell
development" evidence=IEA] [GO:0044297 "cell body" evidence=IEA]
[GO:0030425 "dendrite" evidence=IEA] [GO:0008306 "associative
learning" evidence=IEA] [GO:0007605 "sensory perception of sound"
evidence=IEA] [GO:0001662 "behavioral fear response" evidence=IEA]
[GO:0045211 "postsynaptic membrane" evidence=IEA] [GO:0030054 "cell
junction" evidence=IEA] [GO:0016021 "integral to membrane"
evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0007214 "gamma-aminobutyric acid signaling pathway"
evidence=IEA] [GO:0006821 "chloride transport" evidence=IEA]
[GO:0005230 "extracellular ligand-gated ion channel activity"
evidence=IEA] [GO:0004890 "GABA-A receptor activity" evidence=IEA]
InterPro:IPR001390 InterPro:IPR005435 InterPro:IPR006028
InterPro:IPR006029 InterPro:IPR006201 InterPro:IPR006202
InterPro:IPR018000 Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252
PRINTS:PR00253 PRINTS:PR01079 PRINTS:PR01618 PROSITE:PS00236
GO:GO:0016021 GO:GO:0005886 GO:GO:0030054 GO:GO:0045211
GO:GO:0005230 GO:GO:0004890 Gene3D:2.70.170.10 PANTHER:PTHR18945
SUPFAM:SSF90112 SUPFAM:SSF63712 TIGRFAMs:TIGR00860 GO:GO:0007214
GO:GO:0030425 GO:GO:0008306 GO:GO:0007605 GO:GO:0001662
GO:GO:0044297 GO:GO:0090102 GO:GO:0006821 GO:GO:0060119 KO:K05175
GeneTree:ENSGT00550000074441 GO:GO:0060384 OMA:WTNGTTK
EMBL:CU861926 RefSeq:XP_003121696.1 UniGene:Ssc.6556
Ensembl:ENSSSCT00000005329 GeneID:100520472 KEGG:ssc:100520472
Uniprot:F1SR89
Length = 463
Score = 216 (81.1 bits), Expect = 1.1e-23, Sum P(2) = 1.1e-23
Identities = 44/106 (41%), Positives = 65/106 (61%)
Query: 100 YSSLTLTFILNRQYGFYLMDFYAPSILLVCISWVSFWMAPDAVPGRTILGASTMLTFFQL 159
Y+ +T F L R+ G++++ Y P I+ V +S VSFW+ ++VP RT+ G +T+LT L
Sbjct: 244 YTIMTAHFHLKRKIGYFVIQTYLPCIMTVILSQVSFWLNRESVPARTVFGVTTVLTMTTL 303
Query: 160 GIETGSSLPNVSYIRSNDVWFFA-CTVFIFLSLAEFAFVNTIWRYG 204
I +SLP V+Y + D WF A C F+F +L EFA VN + G
Sbjct: 304 SISARNSLPKVAYATAMD-WFIAVCYAFVFSALIEFATVNYFTKRG 348
Score = 84 (34.6 bits), Expect = 1.1e-23, Sum P(2) = 1.1e-23
Identities = 19/80 (23%), Positives = 40/80 (50%)
Query: 16 QQEFKVQLLLQLHWKDPRLEYRHYAPHITEMVGERNFIQN-IWTPHIYLTNERDSLVLGL 74
+ E+ + + + WKD RL ++ P + + N + + IWTP + N + S+ +
Sbjct: 91 EMEYTIDVFFRQSWKDERLRFK--GP--MQRLPLNNLLASKIWTPDTFFHNGKKSIAHNM 146
Query: 75 YRRDMLVSILPDGDMLFSTR 94
+ L+ + DG +L++ R
Sbjct: 147 TTPNKLLRLEDDGTLLYTMR 166
>MGI|MGI:95617 [details] [associations]
symbol:Gabra5 "gamma-aminobutyric acid (GABA) A receptor,
subunit alpha 5" species:10090 "Mus musculus" [GO:0001662
"behavioral fear response" evidence=IMP] [GO:0004890 "GABA-A
receptor activity" evidence=ISO] [GO:0005216 "ion channel activity"
evidence=IEA] [GO:0005230 "extracellular ligand-gated ion channel
activity" evidence=IEA] [GO:0005254 "chloride channel activity"
evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0006810 "transport" evidence=IEA] [GO:0006811 "ion transport"
evidence=IEA] [GO:0006821 "chloride transport" evidence=IEA]
[GO:0007214 "gamma-aminobutyric acid signaling pathway"
evidence=IEA] [GO:0007268 "synaptic transmission" evidence=ISO]
[GO:0007605 "sensory perception of sound" evidence=IMP] [GO:0008306
"associative learning" evidence=IMP] [GO:0016020 "membrane"
evidence=ISO] [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0030054 "cell junction" evidence=IEA] [GO:0030425 "dendrite"
evidence=ISO;IDA] [GO:0032809 "neuronal cell body membrane"
evidence=ISO] [GO:0034707 "chloride channel complex" evidence=IEA]
[GO:0043235 "receptor complex" evidence=ISO] [GO:0044297 "cell
body" evidence=IDA] [GO:0045202 "synapse" evidence=IEA] [GO:0045211
"postsynaptic membrane" evidence=IEA] [GO:0048666 "neuron
development" evidence=IMP] [GO:0050811 "GABA receptor binding"
evidence=ISO] [GO:0060119 "inner ear receptor cell development"
evidence=IMP] [GO:0060384 "innervation" evidence=IMP] [GO:0090102
"cochlea development" evidence=IMP] InterPro:IPR001390
InterPro:IPR005435 InterPro:IPR006028 InterPro:IPR006029
InterPro:IPR006201 InterPro:IPR006202 InterPro:IPR018000
Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252 PRINTS:PR00253
PRINTS:PR01079 PRINTS:PR01618 PROSITE:PS00236 MGI:MGI:95617
GO:GO:0007420 GO:GO:0007268 GO:GO:0030054 GO:GO:0045211
GO:GO:0005230 GO:GO:0004890 Gene3D:2.70.170.10 PANTHER:PTHR18945
SUPFAM:SSF90112 SUPFAM:SSF63712 TIGRFAMs:TIGR00860 GO:GO:0007214
GO:GO:0030425 GO:GO:0008306 GO:GO:0007605 GO:GO:0032809
GO:GO:0001662 GO:GO:0034707 GO:GO:0005254 GO:GO:0044297
GO:GO:0090102 GO:GO:0060119 KO:K05175 eggNOG:NOG238757
GeneTree:ENSGT00550000074441 HOGENOM:HOG000231337
HOVERGEN:HBG051707 OrthoDB:EOG4X0MSC CTD:2558 GO:GO:0060384
OMA:WTNGTTK EMBL:AK038476 EMBL:AK083185 EMBL:BC062112
IPI:IPI00221880 RefSeq:NP_795916.1 UniGene:Mm.273114
ProteinModelPortal:Q8BHJ7 SMR:Q8BHJ7 MINT:MINT-1789015
STRING:Q8BHJ7 PhosphoSite:Q8BHJ7 PRIDE:Q8BHJ7
Ensembl:ENSMUST00000068456 GeneID:110886 KEGG:mmu:110886
UCSC:uc009heb.1 InParanoid:Q8BHJ7 BindingDB:Q8BHJ7
ChEMBL:CHEMBL2304 NextBio:364867 Bgee:Q8BHJ7 Genevestigator:Q8BHJ7
GermOnline:ENSMUSG00000055078 Uniprot:Q8BHJ7
Length = 463
Score = 216 (81.1 bits), Expect = 1.1e-23, Sum P(2) = 1.1e-23
Identities = 44/106 (41%), Positives = 65/106 (61%)
Query: 100 YSSLTLTFILNRQYGFYLMDFYAPSILLVCISWVSFWMAPDAVPGRTILGASTMLTFFQL 159
Y+ +T F L R+ G++++ Y P I+ V +S VSFW+ ++VP RT+ G +T+LT L
Sbjct: 244 YTIMTAHFHLKRKIGYFVIQTYLPCIMTVILSQVSFWLNRESVPARTVFGVTTVLTMTTL 303
Query: 160 GIETGSSLPNVSYIRSNDVWFFA-CTVFIFLSLAEFAFVNTIWRYG 204
I +SLP V+Y + D WF A C F+F +L EFA VN + G
Sbjct: 304 SISARNSLPKVAYATAMD-WFIAVCYAFVFSALIEFATVNYFTKRG 348
Score = 84 (34.6 bits), Expect = 1.1e-23, Sum P(2) = 1.1e-23
Identities = 19/80 (23%), Positives = 40/80 (50%)
Query: 16 QQEFKVQLLLQLHWKDPRLEYRHYAPHITEMVGERNFIQN-IWTPHIYLTNERDSLVLGL 74
+ E+ + + + WKD RL ++ P + + N + + IWTP + N + S+ +
Sbjct: 91 EMEYTIDVFFRQSWKDERLRFK--GP--MQRLPLNNLLASKIWTPDTFFHNGKKSIAHNM 146
Query: 75 YRRDMLVSILPDGDMLFSTR 94
+ L+ + DG +L++ R
Sbjct: 147 TTPNKLLRLEDDGTLLYTMR 166
>RGD|61859 [details] [associations]
symbol:Gabra5 "gamma-aminobutyric acid (GABA) A receptor, alpha 5"
species:10116 "Rattus norvegicus" [GO:0001662 "behavioral fear
response" evidence=IEA;ISO] [GO:0004890 "GABA-A receptor activity"
evidence=IDA] [GO:0005230 "extracellular ligand-gated ion channel
activity" evidence=IEA] [GO:0005254 "chloride channel activity"
evidence=TAS] [GO:0007214 "gamma-aminobutyric acid signaling
pathway" evidence=IEA] [GO:0007268 "synaptic transmission"
evidence=IEP;IMP] [GO:0007420 "brain development" evidence=IEP]
[GO:0007605 "sensory perception of sound" evidence=IEA;ISO]
[GO:0008306 "associative learning" evidence=IEA;ISO] [GO:0016020
"membrane" evidence=IDA] [GO:0030054 "cell junction" evidence=IEA]
[GO:0030425 "dendrite" evidence=ISO;IDA] [GO:0032809 "neuronal cell
body membrane" evidence=IDA] [GO:0034707 "chloride channel complex"
evidence=IEA] [GO:0043235 "receptor complex" evidence=IDA]
[GO:0044297 "cell body" evidence=ISO] [GO:0045211 "postsynaptic
membrane" evidence=IEA] [GO:0048666 "neuron development"
evidence=ISO] [GO:0050811 "GABA receptor binding" evidence=IPI]
[GO:0060119 "inner ear receptor cell development" evidence=IEA;ISO]
[GO:0060384 "innervation" evidence=IEA;ISO] [GO:0090102 "cochlea
development" evidence=IEA;ISO] InterPro:IPR001390 InterPro:IPR005435
InterPro:IPR006028 InterPro:IPR006029 InterPro:IPR006201
InterPro:IPR006202 InterPro:IPR018000 Pfam:PF02931 Pfam:PF02932
PRINTS:PR00252 PRINTS:PR00253 PRINTS:PR01079 PRINTS:PR01618
PROSITE:PS00236 RGD:61859 GO:GO:0007420 GO:GO:0007268 GO:GO:0030054
GO:GO:0045211 GO:GO:0005230 GO:GO:0004890 Gene3D:2.70.170.10
PANTHER:PTHR18945 SUPFAM:SSF90112 SUPFAM:SSF63712 TIGRFAMs:TIGR00860
GO:GO:0007214 GO:GO:0030425 GO:GO:0008306 GO:GO:0007605
GO:GO:0043235 GO:GO:0032809 GO:GO:0001662 GO:GO:0034707
GO:GO:0005254 GO:GO:0090102 GO:GO:0060119 KO:K05175 eggNOG:NOG238757
GeneTree:ENSGT00550000074441 HOGENOM:HOG000231337 HOVERGEN:HBG051707
OrthoDB:EOG4X0MSC CTD:2558 GO:GO:0060384 OMA:WTNGTTK EMBL:X51992
EMBL:L08494 IPI:IPI00325359 PIR:B34130 RefSeq:NP_058991.1
UniGene:Rn.10368 ProteinModelPortal:P19969 MINT:MINT-1783807
STRING:P19969 PhosphoSite:P19969 Ensembl:ENSRNOT00000014573
GeneID:29707 KEGG:rno:29707 UCSC:RGD:61859 InParanoid:P19969
BindingDB:P19969 ChEMBL:CHEMBL300 NextBio:610127
Genevestigator:P19969 GermOnline:ENSRNOG00000010803 Uniprot:P19969
Length = 464
Score = 216 (81.1 bits), Expect = 1.1e-23, Sum P(2) = 1.1e-23
Identities = 44/106 (41%), Positives = 65/106 (61%)
Query: 100 YSSLTLTFILNRQYGFYLMDFYAPSILLVCISWVSFWMAPDAVPGRTILGASTMLTFFQL 159
Y+ +T F L R+ G++++ Y P I+ V +S VSFW+ ++VP RT+ G +T+LT L
Sbjct: 244 YTIMTAHFHLKRKIGYFVIQTYLPCIMTVILSQVSFWLNRESVPARTVFGVTTVLTMTTL 303
Query: 160 GIETGSSLPNVSYIRSNDVWFFA-CTVFIFLSLAEFAFVNTIWRYG 204
I +SLP V+Y + D WF A C F+F +L EFA VN + G
Sbjct: 304 SISARNSLPKVAYATAMD-WFIAVCYAFVFSALIEFATVNYFTKRG 348
Score = 84 (34.6 bits), Expect = 1.1e-23, Sum P(2) = 1.1e-23
Identities = 19/80 (23%), Positives = 40/80 (50%)
Query: 16 QQEFKVQLLLQLHWKDPRLEYRHYAPHITEMVGERNFIQN-IWTPHIYLTNERDSLVLGL 74
+ E+ + + + WKD RL ++ P + + N + + IWTP + N + S+ +
Sbjct: 91 EMEYTIDVFFRQSWKDERLRFK--GP--MQRLPLNNLLASKIWTPDTFFHNGKKSIAHNM 146
Query: 75 YRRDMLVSILPDGDMLFSTR 94
+ L+ + DG +L++ R
Sbjct: 147 TTPNKLLRLEDDGTLLYTMR 166
>UNIPROTKB|F1NES8 [details] [associations]
symbol:GABRE "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0004890 "GABA-A receptor activity" evidence=IEA]
[GO:0005230 "extracellular ligand-gated ion channel activity"
evidence=IEA] [GO:0006821 "chloride transport" evidence=IEA]
[GO:0007214 "gamma-aminobutyric acid signaling pathway"
evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0016021 "integral to membrane" evidence=IEA] [GO:0030054 "cell
junction" evidence=IEA] [GO:0045211 "postsynaptic membrane"
evidence=IEA] InterPro:IPR005437 InterPro:IPR006028
InterPro:IPR006029 InterPro:IPR006201 InterPro:IPR006202
InterPro:IPR018000 Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252
PRINTS:PR00253 PRINTS:PR01620 PROSITE:PS00236 GO:GO:0016021
GO:GO:0005886 GO:GO:0030054 GO:GO:0045211 GO:GO:0005230
GO:GO:0004890 Gene3D:2.70.170.10 PANTHER:PTHR18945 SUPFAM:SSF90112
SUPFAM:SSF63712 TIGRFAMs:TIGR00860 GO:GO:0007214 GO:GO:0006821
GeneTree:ENSGT00540000070314 EMBL:AADN02013490 IPI:IPI00683388
Ensembl:ENSGALT00000027026 Uniprot:F1NES8
Length = 430
Score = 221 (82.9 bits), Expect = 1.3e-23, Sum P(2) = 1.3e-23
Identities = 43/105 (40%), Positives = 66/105 (62%)
Query: 94 RSRAYMYSSLTLTFILNRQYGFYLMDFYAPSILLVCISWVSFWMAPDAVPGRTILGASTM 153
R+ A Y +T++F L+R+ G++ + Y P IL V +SWVSFW+ D+ P RT LG +T+
Sbjct: 209 RTGAGEYMVMTVSFDLSRRMGYFAIQTYIPCILTVVLSWVSFWIKRDSTPARTSLGITTV 268
Query: 154 LTFFQLGIETGSSLPNVSYIRSNDVWFFACTVFIFLSLAEFAFVN 198
LT L + LP VSYI + D++ C +F+F +L E+A +N
Sbjct: 269 LTMTTLSTISRKHLPRVSYITAMDLFVSVCFIFVFAALMEYATLN 313
Score = 76 (31.8 bits), Expect = 1.3e-23, Sum P(2) = 1.3e-23
Identities = 21/86 (24%), Positives = 37/86 (43%)
Query: 10 IGNLS-FQQEFKVQLLLQLHWKDPRLEYRHYAPHITEMVGERNFIQNIWTPHIYLTNERD 68
IG +S Q E+ + + W D RL + +T N + IW P + N +
Sbjct: 57 IGPVSVIQMEYTIDIFFAQTWYDRRLRFNSTLKALTL---NTNMVSRIWIPDTFFRNSKR 113
Query: 69 SLVLGLYRRDMLVSILPDGDMLFSTR 94
+ + + L+ I DG +L++ R
Sbjct: 114 ADSHWITTPNQLLRIWNDGKVLYTLR 139
>UNIPROTKB|G1K310 [details] [associations]
symbol:GABRE "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0004890 "GABA-A receptor activity" evidence=IEA]
[GO:0005230 "extracellular ligand-gated ion channel activity"
evidence=IEA] [GO:0006821 "chloride transport" evidence=IEA]
[GO:0007214 "gamma-aminobutyric acid signaling pathway"
evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0016021 "integral to membrane" evidence=IEA] [GO:0030054 "cell
junction" evidence=IEA] [GO:0045211 "postsynaptic membrane"
evidence=IEA] InterPro:IPR005437 InterPro:IPR006028
InterPro:IPR006029 InterPro:IPR006201 InterPro:IPR006202
InterPro:IPR018000 Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252
PRINTS:PR00253 PRINTS:PR01620 PROSITE:PS00236 GO:GO:0016021
GO:GO:0005886 GO:GO:0030054 GO:GO:0045211 GO:GO:0005230
GO:GO:0004890 Gene3D:2.70.170.10 PANTHER:PTHR18945 SUPFAM:SSF90112
SUPFAM:SSF63712 TIGRFAMs:TIGR00860 GO:GO:0007214 GO:GO:0006821
GeneTree:ENSGT00540000070314 EMBL:AADN02013490
Ensembl:ENSGALT00000011777 OMA:FFCCIED Uniprot:G1K310
Length = 439
Score = 221 (82.9 bits), Expect = 1.5e-23, Sum P(2) = 1.5e-23
Identities = 43/105 (40%), Positives = 66/105 (62%)
Query: 94 RSRAYMYSSLTLTFILNRQYGFYLMDFYAPSILLVCISWVSFWMAPDAVPGRTILGASTM 153
R+ A Y +T++F L+R+ G++ + Y P IL V +SWVSFW+ D+ P RT LG +T+
Sbjct: 218 RTGAGEYMVMTVSFDLSRRMGYFAIQTYIPCILTVVLSWVSFWIKRDSTPARTSLGITTV 277
Query: 154 LTFFQLGIETGSSLPNVSYIRSNDVWFFACTVFIFLSLAEFAFVN 198
LT L + LP VSYI + D++ C +F+F +L E+A +N
Sbjct: 278 LTMTTLSTISRKHLPRVSYITAMDLFVSVCFIFVFAALMEYATLN 322
Score = 76 (31.8 bits), Expect = 1.5e-23, Sum P(2) = 1.5e-23
Identities = 21/86 (24%), Positives = 37/86 (43%)
Query: 10 IGNLS-FQQEFKVQLLLQLHWKDPRLEYRHYAPHITEMVGERNFIQNIWTPHIYLTNERD 68
IG +S Q E+ + + W D RL + +T N + IW P + N +
Sbjct: 66 IGPVSVIQMEYTIDIFFAQTWYDRRLRFNSTLKALTL---NTNMVSRIWIPDTFFRNSKR 122
Query: 69 SLVLGLYRRDMLVSILPDGDMLFSTR 94
+ + + L+ I DG +L++ R
Sbjct: 123 ADSHWITTPNQLLRIWNDGKVLYTLR 148
>UNIPROTKB|E1BW42 [details] [associations]
symbol:GABRA5 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0004890 "GABA-A receptor activity"
evidence=IEA] [GO:0005230 "extracellular ligand-gated ion channel
activity" evidence=IEA] [GO:0006821 "chloride transport"
evidence=IEA] [GO:0007214 "gamma-aminobutyric acid signaling
pathway" evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0016021 "integral to membrane" evidence=IEA] [GO:0030054 "cell
junction" evidence=IEA] [GO:0045211 "postsynaptic membrane"
evidence=IEA] [GO:0001662 "behavioral fear response" evidence=IEA]
[GO:0007605 "sensory perception of sound" evidence=IEA] [GO:0008306
"associative learning" evidence=IEA] [GO:0030425 "dendrite"
evidence=IEA] [GO:0044297 "cell body" evidence=IEA] [GO:0060119
"inner ear receptor cell development" evidence=IEA] [GO:0060384
"innervation" evidence=IEA] [GO:0090102 "cochlea development"
evidence=IEA] InterPro:IPR001390 InterPro:IPR005435
InterPro:IPR006028 InterPro:IPR006029 InterPro:IPR006201
InterPro:IPR006202 InterPro:IPR018000 Pfam:PF02931 Pfam:PF02932
PRINTS:PR00252 PRINTS:PR00253 PRINTS:PR01079 PRINTS:PR01618
PROSITE:PS00236 GO:GO:0016021 GO:GO:0005886 GO:GO:0030054
GO:GO:0045211 GO:GO:0005230 GO:GO:0004890 Gene3D:2.70.170.10
PANTHER:PTHR18945 SUPFAM:SSF90112 SUPFAM:SSF63712
TIGRFAMs:TIGR00860 GO:GO:0007214 GO:GO:0030425 GO:GO:0044297
GO:GO:0006821 GeneTree:ENSGT00550000074441 EMBL:AC145944
IPI:IPI00812061 ProteinModelPortal:E1BW42
Ensembl:ENSGALT00000027027 OMA:FRTHLLL Uniprot:E1BW42
Length = 464
Score = 214 (80.4 bits), Expect = 1.8e-23, Sum P(2) = 1.8e-23
Identities = 43/100 (43%), Positives = 63/100 (63%)
Query: 100 YSSLTLTFILNRQYGFYLMDFYAPSILLVCISWVSFWMAPDAVPGRTILGASTMLTFFQL 159
Y+ +T F L R+ G++++ Y P I+ V +S VSFW+ ++VP RT+ G +T+LT L
Sbjct: 244 YTIMTAHFHLKRKIGYFVIQTYLPCIMTVILSQVSFWLNRESVPARTVFGVTTVLTMTTL 303
Query: 160 GIETGSSLPNVSYIRSNDVWFFA-CTVFIFLSLAEFAFVN 198
I +SLP V+Y + D WF A C F+F +L EFA VN
Sbjct: 304 SISARNSLPKVAYATAMD-WFIAVCYAFVFSALIEFATVN 342
Score = 84 (34.6 bits), Expect = 1.8e-23, Sum P(2) = 1.8e-23
Identities = 19/80 (23%), Positives = 40/80 (50%)
Query: 16 QQEFKVQLLLQLHWKDPRLEYRHYAPHITEMVGERNFIQN-IWTPHIYLTNERDSLVLGL 74
+ E+ + + + WKD RL ++ P + + N + + IWTP + N + S+ +
Sbjct: 91 EMEYTIDVFFRQSWKDERLRFK--GP--MQRLPLNNLLASKIWTPDTFFHNGKKSIAHNM 146
Query: 75 YRRDMLVSILPDGDMLFSTR 94
+ L+ + DG +L++ R
Sbjct: 147 TTPNKLLRLEDDGTLLYTMR 166
>UNIPROTKB|P34904 [details] [associations]
symbol:GABRG4 "Gamma-aminobutyric acid receptor subunit
gamma-4" species:9031 "Gallus gallus" [GO:0004890 "GABA-A receptor
activity" evidence=IEA] [GO:0005230 "extracellular ligand-gated ion
channel activity" evidence=IEA] [GO:0007214 "gamma-aminobutyric
acid signaling pathway" evidence=IEA] [GO:0005254 "chloride channel
activity" evidence=IEA] [GO:0030054 "cell junction" evidence=IEA]
[GO:0034707 "chloride channel complex" evidence=IEA] [GO:0005886
"plasma membrane" evidence=IEA] [GO:0045211 "postsynaptic membrane"
evidence=IEA] InterPro:IPR005437 InterPro:IPR006028
InterPro:IPR006029 InterPro:IPR006201 InterPro:IPR006202
InterPro:IPR018000 Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252
PRINTS:PR00253 PRINTS:PR01620 PROSITE:PS00236 GO:GO:0005886
GO:GO:0030054 GO:GO:0045211 GO:GO:0005230 GO:GO:0004890
Gene3D:2.70.170.10 PANTHER:PTHR18945 SUPFAM:SSF90112
SUPFAM:SSF63712 TIGRFAMs:TIGR00860 GO:GO:0007214 GO:GO:0034707
GO:GO:0005254 eggNOG:NOG238757 HOGENOM:HOG000231337
HOVERGEN:HBG051707 CTD:2564 EMBL:X73533 IPI:IPI00595504 PIR:S38296
RefSeq:NP_990576.1 UniGene:Gga.692 ProteinModelPortal:P34904
GeneID:396173 KEGG:gga:396173 InParanoid:P34904 NextBio:20816227
Uniprot:P34904
Length = 457
Score = 221 (82.9 bits), Expect = 1.9e-23, Sum P(2) = 1.9e-23
Identities = 43/105 (40%), Positives = 66/105 (62%)
Query: 94 RSRAYMYSSLTLTFILNRQYGFYLMDFYAPSILLVCISWVSFWMAPDAVPGRTILGASTM 153
R+ A Y +T++F L+R+ G++ + Y P IL V +SWVSFW+ D+ P RT LG +T+
Sbjct: 236 RTGAGEYMVMTVSFDLSRRMGYFAIQTYIPCILTVVLSWVSFWIKRDSTPARTSLGITTV 295
Query: 154 LTFFQLGIETGSSLPNVSYIRSNDVWFFACTVFIFLSLAEFAFVN 198
LT L + LP VSYI + D++ C +F+F +L E+A +N
Sbjct: 296 LTMTTLSTISRKHLPRVSYITAMDLFVSVCFIFVFAALMEYATLN 340
Score = 76 (31.8 bits), Expect = 1.9e-23, Sum P(2) = 1.9e-23
Identities = 21/86 (24%), Positives = 37/86 (43%)
Query: 10 IGNLS-FQQEFKVQLLLQLHWKDPRLEYRHYAPHITEMVGERNFIQNIWTPHIYLTNERD 68
IG +S Q E+ + + W D RL + +T N + IW P + N +
Sbjct: 84 IGPVSVIQMEYTIDIFFAQTWYDRRLRFNSTLKALTL---NTNMVSRIWIPDTFFRNSKR 140
Query: 69 SLVLGLYRRDMLVSILPDGDMLFSTR 94
+ + + L+ I DG +L++ R
Sbjct: 141 ADSHWITTPNQLLRIWNDGKVLYTLR 166
>WB|WBGene00013914 [details] [associations]
symbol:lgc-37 species:6239 "Caenorhabditis elegans"
[GO:0006811 "ion transport" evidence=IEA] [GO:0016021 "integral to
membrane" evidence=IEA] [GO:0016020 "membrane" evidence=IEA]
[GO:0005230 "extracellular ligand-gated ion channel activity"
evidence=IEA] [GO:0006810 "transport" evidence=IEA] [GO:0045211
"postsynaptic membrane" evidence=IEA] InterPro:IPR006028
InterPro:IPR006029 InterPro:IPR006201 InterPro:IPR006202
InterPro:IPR018000 Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252
PRINTS:PR00253 PROSITE:PS00236 GO:GO:0016021 GO:GO:0005886
GO:GO:0030054 GO:GO:0045211 GO:GO:0005230 Gene3D:2.70.170.10
PANTHER:PTHR18945 SUPFAM:SSF90112 SUPFAM:SSF63712
TIGRFAMs:TIGR00860 EMBL:Z93372 KO:K05175
GeneTree:ENSGT00540000070314 EMBL:Z93397 HSSP:P23415 PIR:T18791
RefSeq:NP_499662.2 ProteinModelPortal:G5ECN1 SMR:G5ECN1
IntAct:G5ECN1 EnsemblMetazoa:ZC482.5 GeneID:176694
KEGG:cel:CELE_ZC482.5 CTD:176694 WormBase:ZC482.5 OMA:NIAGGLY
NextBio:893624 Uniprot:G5ECN1
Length = 483
Score = 212 (79.7 bits), Expect = 2.3e-23, Sum P(2) = 2.3e-23
Identities = 43/111 (38%), Positives = 64/111 (57%)
Query: 88 DMLFSTRSRAYMYSSLTLTFILNRQYGFYLMDFYAPSILLVCISWVSFWMAPDAVPGRTI 147
D FS R+ S L + F L RQ G+Y++ Y P L+V +SWVSFW+ +A P R
Sbjct: 234 DFRFSDRN----ISVLNVYFKLQRQQGYYILQIYTPCTLVVVMSWVSFWINKEASPARVS 289
Query: 148 LGASTMLTFFQLGIETGSSLPNVSYIRSNDVWFFACTVFIFLSLAEFAFVN 198
LG T+L+ +G + LP VS+ + DV+ C VF+F ++ E+A +N
Sbjct: 290 LGIMTVLSMSTIGFGLRTDLPKVSHSTALDVYILTCFVFLFAAMVEYAVIN 340
Score = 86 (35.3 bits), Expect = 2.3e-23, Sum P(2) = 2.3e-23
Identities = 27/96 (28%), Positives = 43/96 (44%)
Query: 10 IGNLSFQQ-EFKVQLLLQLHWKDPRLEYRHYAPHITEMVGERNFIQNIWTPHIYLTNERD 68
+G +S Q EF + + W D RL + P E+ +++IW P Y+ N R
Sbjct: 80 MGPVSEQNMEFSLDCYFRQKWLDRRLAFTPINPSKPEIPLASKMLKDIWIPDTYIRNGRK 139
Query: 69 SLVLGLYRRDMLVSILPDGDMLFSTR----SRAYMY 100
S + L ++L + DG + S R SR M+
Sbjct: 140 SYLHTLTVPNILFRVRSDGQVHVSQRLTIRSRCQMF 175
>UNIPROTKB|F6Q4V7 [details] [associations]
symbol:GABRG1 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0007268 "synaptic transmission" evidence=IEA]
[GO:0045211 "postsynaptic membrane" evidence=IEA] [GO:0030054 "cell
junction" evidence=IEA] [GO:0016021 "integral to membrane"
evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0007214 "gamma-aminobutyric acid signaling pathway"
evidence=IEA] [GO:0006821 "chloride transport" evidence=IEA]
[GO:0005230 "extracellular ligand-gated ion channel activity"
evidence=IEA] [GO:0004890 "GABA-A receptor activity" evidence=IEA]
InterPro:IPR005437 InterPro:IPR006028 InterPro:IPR006029
InterPro:IPR006201 InterPro:IPR006202 InterPro:IPR018000
Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252 PRINTS:PR00253
PRINTS:PR01620 PROSITE:PS00236 GO:GO:0016021 GO:GO:0005886
GO:GO:0007268 GO:GO:0030054 GO:GO:0045211 GO:GO:0005230
GO:GO:0004890 Gene3D:2.70.170.10 PANTHER:PTHR18945 SUPFAM:SSF90112
SUPFAM:SSF63712 TIGRFAMs:TIGR00860 GO:GO:0007214 GO:GO:0006821
GeneTree:ENSGT00540000070314 OMA:HYFTSNK EMBL:DAAA02017594
EMBL:DAAA02017595 EMBL:DAAA02017596 EMBL:DAAA02017597
IPI:IPI00715159 Ensembl:ENSBTAT00000016309 Uniprot:F6Q4V7
Length = 354
Score = 216 (81.1 bits), Expect = 2.6e-23, Sum P(2) = 2.6e-23
Identities = 41/95 (43%), Positives = 60/95 (63%)
Query: 100 YSSLTLTFILNRQYGFYLMDFYAPSILLVCISWVSFWMAPDAVPGRTILGASTMLTFFQL 159
Y +T+ F L+R+ G++ + Y P IL V +SWVSFW+ DAVP RT LG +T+LT L
Sbjct: 234 YIIMTIFFDLSRRMGYFTIQTYIPCILTVVLSWVSFWINKDAVPARTSLGITTVLTMTTL 293
Query: 160 GIETGSSLPNVSYIRSNDVWFFACTVFIFLSLAEF 194
SLP VSY+ + D++ C +F+F +L E+
Sbjct: 294 STIARKSLPKVSYVTAMDLFVSVCFIFVFAALMEY 328
Score = 72 (30.4 bits), Expect = 2.6e-23, Sum P(2) = 2.6e-23
Identities = 19/77 (24%), Positives = 35/77 (45%)
Query: 18 EFKVQLLLQLHWKDPRLEYRHYAPHITEMVGERNFIQNIWTPHIYLTNERDSLVLGLYRR 77
E+ + ++ W D RL++ + M+ N + IW P + N R S +
Sbjct: 85 EYTIDIIFAQTWFDSRLKFNSTMKVL--MLNS-NMVGKIWIPDTFFRNSRKSDAHWITTP 141
Query: 78 DMLVSILPDGDMLFSTR 94
+ L+ I DG +L++ R
Sbjct: 142 NRLLRIWNDGRVLYTLR 158
>WB|WBGene00001594 [details] [associations]
symbol:glc-4 species:6239 "Caenorhabditis elegans"
[GO:0006811 "ion transport" evidence=IEA] [GO:0016021 "integral to
membrane" evidence=IEA] [GO:0016020 "membrane" evidence=IEA]
[GO:0005230 "extracellular ligand-gated ion channel activity"
evidence=IEA] [GO:0006810 "transport" evidence=IEA] [GO:0045211
"postsynaptic membrane" evidence=IEA] InterPro:IPR006028
InterPro:IPR006029 InterPro:IPR006201 InterPro:IPR006202
InterPro:IPR018000 Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252
PRINTS:PR00253 PROSITE:PS00236 GO:GO:0016021 GO:GO:0005886
GO:GO:0030054 GO:GO:0045211 GO:GO:0005230 Gene3D:2.70.170.10
PANTHER:PTHR18945 SUPFAM:SSF90112 SUPFAM:SSF63712
TIGRFAMs:TIGR00860 EMBL:FO080695 GeneTree:ENSGT00630000089685
HOGENOM:HOG000231336 RefSeq:NP_495489.2 ProteinModelPortal:Q95QT7
SMR:Q95QT7 PaxDb:Q95QT7 EnsemblMetazoa:C27H5.8 GeneID:182971
KEGG:cel:CELE_C27H5.8 UCSC:C27H5.8 CTD:182971 WormBase:C27H5.8
eggNOG:NOG238729 InParanoid:Q95QT7 OMA:HEGANGA NextBio:919482
Uniprot:Q95QT7
Length = 500
Score = 216 (81.1 bits), Expect = 4.2e-23, Sum P(2) = 4.2e-23
Identities = 43/109 (39%), Positives = 63/109 (57%)
Query: 92 STRSRAYMYSSLTLTFILNRQYGFYLMDFYAPSILLVCISWVSFWMAPDAVPGRTILGAS 151
++++ YS L + LNR + F+L+ Y PS +LV ++WVS+W+ + R L
Sbjct: 243 TSKTNTGTYSCLKVEIRLNRVFSFFLLQLYIPSSMLVGVAWVSYWIDWKSTAARVPLAIV 302
Query: 152 TMLTFFQLGIETGSSLPNVSYIRSNDVWFFACTVFIFLSLAEFAFVNTI 200
T+LT S+LP VSY +S D+W AC VFIF SL E+A VN +
Sbjct: 303 TLLTMITTSHAINSNLPPVSYAKSIDIWVGACVVFIFFSLIEYAVVNYV 351
Score = 80 (33.2 bits), Expect = 4.2e-23, Sum P(2) = 4.2e-23
Identities = 21/94 (22%), Positives = 41/94 (43%)
Query: 18 EFKVQLLLQLHWKDPRLEYRHYAPHITEMVGERNFI-----QNIWTPHIYLTNERDSLVL 72
EF Q + W D RL + + ++ FI Q++W P + NE++
Sbjct: 94 EFVAQFRFRQEWYDDRLRFIEHQGLLSSDYRNFEFIHVARDQSLWIPDTFFQNEKNGWYH 153
Query: 73 GLYRRDMLVSILPDGDMLFSTRSRAYMYSSLTLT 106
L + + + I DG +++ R ++ S+ L+
Sbjct: 154 MLNQENRFLKIRSDGKLIYDRRLTLHLACSMHLS 187
>ZFIN|ZDB-GENE-080815-1 [details] [associations]
symbol:gabra6b "gamma-aminobutyric acid (GABA) A
receptor, alpha 6b" species:7955 "Danio rerio" [GO:0004890 "GABA-A
receptor activity" evidence=IEA] [GO:0005230 "extracellular
ligand-gated ion channel activity" evidence=IEA] [GO:0006811 "ion
transport" evidence=IEA] [GO:0016020 "membrane" evidence=IEA]
[GO:0016021 "integral to membrane" evidence=IEA] [GO:0005216 "ion
channel activity" evidence=IEA] [GO:0006810 "transport"
evidence=IEA] [GO:0045211 "postsynaptic membrane" evidence=IEA]
[GO:0045202 "synapse" evidence=IEA] [GO:0030054 "cell junction"
evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
InterPro:IPR001390 InterPro:IPR006028 InterPro:IPR006029
InterPro:IPR006201 InterPro:IPR006202 InterPro:IPR018000
Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252 PRINTS:PR00253
PRINTS:PR01079 PROSITE:PS00236 ZFIN:ZDB-GENE-080815-1 GO:GO:0016021
GO:GO:0005886 GO:GO:0030054 GO:GO:0045211 GO:GO:0005230
GO:GO:0004890 Gene3D:2.70.170.10 PANTHER:PTHR18945 SUPFAM:SSF90112
SUPFAM:SSF63712 TIGRFAMs:TIGR00860 GeneTree:ENSGT00550000074441
EMBL:CABZ01078876 EMBL:CABZ01078877 EMBL:CABZ01078878
EMBL:CABZ01078879 IPI:IPI00962798 ProteinModelPortal:F1QGW0
Ensembl:ENSDART00000124708 Uniprot:F1QGW0
Length = 444
Score = 217 (81.4 bits), Expect = 5.8e-23, Sum P(2) = 5.8e-23
Identities = 46/106 (43%), Positives = 64/106 (60%)
Query: 94 RSRAYMYSSLTLTFILNRQYGFYLMDFYAPSILLVCISWVSFWMAPDAVPGRTILGASTM 153
+S Y +T+ F L R+ GF+L+ Y P I+ V ++ VSFW+ ++VP RT+ G +T+
Sbjct: 220 KSNTGEYIVMTVYFHLQRKMGFFLIQTYIPCIMTVILAQVSFWIDKESVPARTVFGITTV 279
Query: 154 LTFFQLGIETGSSLPNVSYIRSNDVWFFA-CTVFIFLSLAEFAFVN 198
LT L I SLP VSY + D WF A C F+F +L EFA VN
Sbjct: 280 LTMTTLSISARHSLPKVSYATAMD-WFIAVCFAFVFSALIEFAAVN 324
Score = 75 (31.5 bits), Expect = 5.8e-23, Sum P(2) = 5.8e-23
Identities = 19/80 (23%), Positives = 39/80 (48%)
Query: 16 QQEFKVQLLLQLHWKDPRLEYRHYAPHITEMVGERNF-IQNIWTPHIYLTNERDSLVLGL 74
+ E+ + + + W D RL++ P E++ N + IWTP + N + S+ +
Sbjct: 73 EMEYTMDVFFRQTWIDDRLKFE--GP--IEILRLNNLMVSKIWTPDTFFRNGKRSISHNM 128
Query: 75 YRRDMLVSILPDGDMLFSTR 94
+ L I+ +G +L++ R
Sbjct: 129 TTPNKLFRIMQNGTILYTMR 148
>UNIPROTKB|Q7LZ70 [details] [associations]
symbol:GABRG1 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0004890 "GABA-A receptor activity"
evidence=IEA] [GO:0005230 "extracellular ligand-gated ion channel
activity" evidence=IEA] [GO:0006821 "chloride transport"
evidence=IEA] [GO:0007214 "gamma-aminobutyric acid signaling
pathway" evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0016021 "integral to membrane" evidence=IEA] [GO:0030054 "cell
junction" evidence=IEA] [GO:0045211 "postsynaptic membrane"
evidence=IEA] [GO:0007268 "synaptic transmission" evidence=IEA]
InterPro:IPR005437 InterPro:IPR006028 InterPro:IPR006029
InterPro:IPR006201 InterPro:IPR006202 InterPro:IPR018000
Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252 PRINTS:PR00253
PRINTS:PR01620 PROSITE:PS00236 GO:GO:0016021 GO:GO:0005886
GO:GO:0030054 GO:GO:0045211 GO:GO:0005230 GO:GO:0004890
Gene3D:2.70.170.10 PANTHER:PTHR18945 SUPFAM:SSF90112
SUPFAM:SSF63712 TIGRFAMs:TIGR00860 GO:GO:0007214 GO:GO:0006821
eggNOG:NOG238757 HOGENOM:HOG000231337 HOVERGEN:HBG051707
GeneTree:ENSGT00540000070314 HSSP:P23415 CTD:2565 KO:K05186
OMA:HYFTSNK OrthoDB:EOG44BB25 EMBL:AC147646 IPI:IPI00600373
PIR:JH0824 RefSeq:XP_420725.2 UniGene:Gga.5062
Ensembl:ENSGALT00000022976 GeneID:422771 KEGG:gga:422771
InParanoid:Q7LZ70 NextBio:20825358 Uniprot:Q7LZ70
Length = 464
Score = 216 (81.1 bits), Expect = 9.7e-23, Sum P(2) = 9.7e-23
Identities = 41/95 (43%), Positives = 60/95 (63%)
Query: 100 YSSLTLTFILNRQYGFYLMDFYAPSILLVCISWVSFWMAPDAVPGRTILGASTMLTFFQL 159
Y +T+ F L+R+ G++ + Y P IL V +SWVSFW+ DAVP RT LG +T+LT L
Sbjct: 253 YIIMTIFFDLSRRMGYFTIQTYIPCILTVVLSWVSFWINKDAVPARTSLGITTVLTMTTL 312
Query: 160 GIETGSSLPNVSYIRSNDVWFFACTVFIFLSLAEF 194
SLP VSY+ + D++ C +F+F +L E+
Sbjct: 313 STIARKSLPKVSYVTAMDLFVSVCFIFVFAALMEY 347
Score = 75 (31.5 bits), Expect = 9.7e-23, Sum P(2) = 9.7e-23
Identities = 18/77 (23%), Positives = 35/77 (45%)
Query: 18 EFKVQLLLQLHWKDPRLEYRHYAPHITEMVGERNFIQNIWTPHIYLTNERDSLVLGLYRR 77
E+ + ++ W D RL++ + ++ N + IW P + N R S +
Sbjct: 104 EYTIDIIFAQTWYDSRLKFNS---SMKVLMLNSNMVGKIWIPDTFFRNSRKSDAHWITTP 160
Query: 78 DMLVSILPDGDMLFSTR 94
+ L+ I DG +L++ R
Sbjct: 161 NRLLRIWSDGRVLYTLR 177
>UNIPROTKB|E1C779 [details] [associations]
symbol:GABRG3 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0004890 "GABA-A receptor activity"
evidence=IEA] [GO:0005230 "extracellular ligand-gated ion channel
activity" evidence=IEA] [GO:0006821 "chloride transport"
evidence=IEA] [GO:0007214 "gamma-aminobutyric acid signaling
pathway" evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0016021 "integral to membrane" evidence=IEA] [GO:0030054 "cell
junction" evidence=IEA] [GO:0045211 "postsynaptic membrane"
evidence=IEA] InterPro:IPR005437 InterPro:IPR005440
InterPro:IPR006028 InterPro:IPR006029 InterPro:IPR006201
InterPro:IPR006202 InterPro:IPR018000 Pfam:PF02931 Pfam:PF02932
PRINTS:PR00252 PRINTS:PR00253 PRINTS:PR01620 PRINTS:PR01623
PROSITE:PS00236 GO:GO:0016021 GO:GO:0005886 GO:GO:0030054
GO:GO:0045211 GO:GO:0005230 GO:GO:0004890 Gene3D:2.70.170.10
PANTHER:PTHR18945 SUPFAM:SSF90112 SUPFAM:SSF63712
TIGRFAMs:TIGR00860 GO:GO:0007214 GO:GO:0006821
GeneTree:ENSGT00540000070314 OMA:RGRIHID EMBL:AC145944
EMBL:AADN02017655 EMBL:AADN02017656 EMBL:AADN02017657
EMBL:AADN02017658 IPI:IPI00811977 ProteinModelPortal:E1C779
Ensembl:ENSGALT00000030259 Uniprot:E1C779
Length = 465
Score = 221 (82.9 bits), Expect = 1.1e-22, Sum P(2) = 1.1e-22
Identities = 42/99 (42%), Positives = 62/99 (62%)
Query: 100 YSSLTLTFILNRQYGFYLMDFYAPSILLVCISWVSFWMAPDAVPGRTILGASTMLTFFQL 159
Y +T+ F L+R+ G++ + Y P IL V +SWVSFW+ DA P RT LG +T+LT L
Sbjct: 240 YVVMTIYFDLSRRMGYFTIQTYIPCILTVVLSWVSFWIKKDATPARTALGITTVLTMTTL 299
Query: 160 GIETGSSLPNVSYIRSNDVWFFACTVFIFLSLAEFAFVN 198
SLP VSY+ + D++ C +F+F +L E+A +N
Sbjct: 300 STIARKSLPRVSYVTAMDLFVTVCFLFVFAALMEYATLN 338
Score = 69 (29.3 bits), Expect = 1.1e-22, Sum P(2) = 1.1e-22
Identities = 18/81 (22%), Positives = 33/81 (40%)
Query: 14 SFQQEFKVQLLLQLHWKDPRLEYRHYAPHITEMVGERNFIQNIWTPHIYLTNERDSLVLG 73
S E+++ + W D RL + +T N + IW P N + +
Sbjct: 87 SINMEYQIDIFFAQTWTDSRLRFNSTMKILTL---NSNMVGLIWIPDTIFRNSKTAEAHW 143
Query: 74 LYRRDMLVSILPDGDMLFSTR 94
+ + L+ I DG +L++ R
Sbjct: 144 ITTPNQLLRIWNDGKILYTLR 164
>UNIPROTKB|Q99928 [details] [associations]
symbol:GABRG3 "Gamma-aminobutyric acid receptor subunit
gamma-3" species:9606 "Homo sapiens" [GO:0007214
"gamma-aminobutyric acid signaling pathway" evidence=IEA]
[GO:0030054 "cell junction" evidence=IEA] [GO:0034707 "chloride
channel complex" evidence=IEA] [GO:0004890 "GABA-A receptor
activity" evidence=IEA] [GO:0005254 "chloride channel activity"
evidence=IEA] [GO:0042493 "response to drug" evidence=IEA]
[GO:0045211 "postsynaptic membrane" evidence=IEA] [GO:0007268
"synaptic transmission" evidence=NAS;TAS] [GO:0016021 "integral to
membrane" evidence=NAS] [GO:0005230 "extracellular ligand-gated ion
channel activity" evidence=NAS] [GO:0005886 "plasma membrane"
evidence=TAS] [GO:0034220 "ion transmembrane transport"
evidence=TAS] [GO:0055085 "transmembrane transport" evidence=TAS]
Reactome:REACT_13685 Reactome:REACT_15518 InterPro:IPR005437
InterPro:IPR005440 InterPro:IPR006028 InterPro:IPR006029
InterPro:IPR006201 InterPro:IPR006202 InterPro:IPR018000
Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252 PRINTS:PR00253
PRINTS:PR01620 PRINTS:PR01623 PROSITE:PS00236 GO:GO:0016021
GO:GO:0005886 GO:GO:0042493 GO:GO:0007268 GO:GO:0030054
GO:GO:0045211 GO:GO:0005230 GO:GO:0004890 Gene3D:2.70.170.10
PANTHER:PTHR18945 SUPFAM:SSF90112 SUPFAM:SSF63712
TIGRFAMs:TIGR00860 GO:GO:0007214 GO:GO:0034707 GO:GO:0005254
HOGENOM:HOG000231337 HOVERGEN:HBG051707 KO:K05186 EMBL:S82769
EMBL:AF269144 EMBL:AF269135 EMBL:AF269136 EMBL:AF269137
EMBL:AF269138 EMBL:AF269139 EMBL:AF269140 EMBL:AF269141
EMBL:AF269142 EMBL:AF269143 EMBL:AH009226 IPI:IPI00294459
RefSeq:NP_150092.2 UniGene:Hs.569475 ProteinModelPortal:Q99928
SMR:Q99928 STRING:Q99928 PhosphoSite:Q99928 DMDM:13959689
PRIDE:Q99928 Ensembl:ENST00000333743 GeneID:2567 KEGG:hsa:2567
UCSC:uc001zbf.3 CTD:2567 GeneCards:GC15P027216 H-InvDB:HIX0026811
HGNC:HGNC:4088 MIM:600233 neXtProt:NX_Q99928 PharmGKB:PA28502
eggNOG:NOG300758 InParanoid:Q99928 OMA:RGRIHID PhylomeDB:Q99928
BindingDB:Q99928 ChEMBL:CHEMBL2739 GenomeRNAi:2567 NextBio:10153
ArrayExpress:Q99928 Bgee:Q99928 CleanEx:HS_GABRG3
Genevestigator:Q99928 Uniprot:Q99928
Length = 467
Score = 221 (82.9 bits), Expect = 1.2e-22, Sum P(2) = 1.2e-22
Identities = 42/99 (42%), Positives = 62/99 (62%)
Query: 100 YSSLTLTFILNRQYGFYLMDFYAPSILLVCISWVSFWMAPDAVPGRTILGASTMLTFFQL 159
Y +T+ F L+R+ G++ + Y P IL V +SWVSFW+ DA P RT LG +T+LT L
Sbjct: 240 YVVMTIYFELSRRMGYFTIQTYIPCILTVVLSWVSFWIKKDATPARTALGITTVLTMTTL 299
Query: 160 GIETGSSLPNVSYIRSNDVWFFACTVFIFLSLAEFAFVN 198
SLP VSY+ + D++ C +F+F +L E+A +N
Sbjct: 300 STIARKSLPRVSYVTAMDLFVTVCFLFVFAALMEYATLN 338
Score = 69 (29.3 bits), Expect = 1.2e-22, Sum P(2) = 1.2e-22
Identities = 18/81 (22%), Positives = 33/81 (40%)
Query: 14 SFQQEFKVQLLLQLHWKDPRLEYRHYAPHITEMVGERNFIQNIWTPHIYLTNERDSLVLG 73
S E+++ + W D RL + +T N + IW P N + +
Sbjct: 87 SINMEYQIDIFFAQTWTDSRLRFNSTMKILTL---NSNMVGLIWIPDTIFRNSKTAEAHW 143
Query: 74 LYRRDMLVSILPDGDMLFSTR 94
+ + L+ I DG +L++ R
Sbjct: 144 ITTPNQLLRIWNDGKILYTLR 164
>MGI|MGI:95624 [details] [associations]
symbol:Gabrg3 "gamma-aminobutyric acid (GABA) A receptor,
subunit gamma 3" species:10090 "Mus musculus" [GO:0004890 "GABA-A
receptor activity" evidence=ISO] [GO:0005216 "ion channel activity"
evidence=IEA] [GO:0005230 "extracellular ligand-gated ion channel
activity" evidence=IEA] [GO:0005254 "chloride channel activity"
evidence=ISO] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0006810 "transport" evidence=IEA] [GO:0006811 "ion transport"
evidence=IEA] [GO:0006821 "chloride transport" evidence=IEA]
[GO:0007214 "gamma-aminobutyric acid signaling pathway"
evidence=IEA] [GO:0016020 "membrane" evidence=IEA] [GO:0016021
"integral to membrane" evidence=IEA] [GO:0030054 "cell junction"
evidence=IEA] [GO:0034220 "ion transmembrane transport"
evidence=IEA] [GO:0034707 "chloride channel complex" evidence=IEA]
[GO:0042493 "response to drug" evidence=ISO] [GO:0045202 "synapse"
evidence=IEA] [GO:0045211 "postsynaptic membrane" evidence=IEA]
InterPro:IPR005437 InterPro:IPR005440 InterPro:IPR006028
InterPro:IPR006029 InterPro:IPR006201 InterPro:IPR006202
InterPro:IPR018000 Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252
PRINTS:PR00253 PRINTS:PR01620 PRINTS:PR01623 PROSITE:PS00236
MGI:MGI:95624 GO:GO:0005886 GO:GO:0030054 GO:GO:0045211
GO:GO:0005230 GO:GO:0004890 Gene3D:2.70.170.10 PANTHER:PTHR18945
SUPFAM:SSF90112 SUPFAM:SSF63712 TIGRFAMs:TIGR00860 GO:GO:0007214
GO:GO:0034707 GO:GO:0005254 HOGENOM:HOG000231337 HOVERGEN:HBG051707
GeneTree:ENSGT00540000070314 KO:K05186 CTD:2567 eggNOG:NOG300758
OMA:RGRIHID EMBL:X59300 EMBL:AC102098 EMBL:AC102129 EMBL:AC116146
EMBL:AC134844 EMBL:AC156610 EMBL:AC158550 EMBL:CH466599
IPI:IPI00118860 PIR:S16915 RefSeq:NP_032100.2 UniGene:Mm.434343
ProteinModelPortal:P27681 STRING:P27681 PhosphoSite:P27681
PRIDE:P27681 Ensembl:ENSMUST00000068911 GeneID:14407 KEGG:mmu:14407
UCSC:uc009hdz.1 InParanoid:P27681 BindingDB:P27681
ChEMBL:CHEMBL4236 NextBio:285977 Genevestigator:P27681
GermOnline:ENSMUSG00000055026 Uniprot:P27681
Length = 467
Score = 221 (82.9 bits), Expect = 1.2e-22, Sum P(2) = 1.2e-22
Identities = 42/99 (42%), Positives = 62/99 (62%)
Query: 100 YSSLTLTFILNRQYGFYLMDFYAPSILLVCISWVSFWMAPDAVPGRTILGASTMLTFFQL 159
Y +T+ F L+R+ G++ + Y P IL V +SWVSFW+ DA P RT LG +T+LT L
Sbjct: 240 YVVMTIYFELSRRMGYFTIQTYIPCILTVVLSWVSFWIKKDATPARTTLGITTVLTMTTL 299
Query: 160 GIETGSSLPNVSYIRSNDVWFFACTVFIFLSLAEFAFVN 198
SLP VSY+ + D++ C +F+F +L E+A +N
Sbjct: 300 STIARKSLPRVSYVTAMDLFVTVCFLFVFAALMEYATLN 338
Score = 69 (29.3 bits), Expect = 1.2e-22, Sum P(2) = 1.2e-22
Identities = 18/81 (22%), Positives = 33/81 (40%)
Query: 14 SFQQEFKVQLLLQLHWKDPRLEYRHYAPHITEMVGERNFIQNIWTPHIYLTNERDSLVLG 73
S E+++ + W D RL + +T N + IW P N + +
Sbjct: 87 SINMEYQIDIFFAQTWTDSRLRFNSTMKILTL---NSNMVGLIWIPDTIFRNSKTAEAHW 143
Query: 74 LYRRDMLVSILPDGDMLFSTR 94
+ + L+ I DG +L++ R
Sbjct: 144 ITTPNQLLRIWNDGKILYTLR 164
>RGD|621735 [details] [associations]
symbol:Gabrg3 "gamma-aminobutyric acid (GABA) A receptor, gamma
3" species:10116 "Rattus norvegicus" [GO:0004890 "GABA-A receptor
activity" evidence=IEA;IDA] [GO:0005230 "extracellular ligand-gated
ion channel activity" evidence=IEA] [GO:0005254 "chloride channel
activity" evidence=IDA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0006821 "chloride transport" evidence=IEA] [GO:0007214
"gamma-aminobutyric acid signaling pathway" evidence=IEA;TAS]
[GO:0016021 "integral to membrane" evidence=IEA] [GO:0030054 "cell
junction" evidence=IEA] [GO:0034707 "chloride channel complex"
evidence=IEA] [GO:0042493 "response to drug" evidence=IDA]
[GO:0045211 "postsynaptic membrane" evidence=IEA]
InterPro:IPR005437 InterPro:IPR005440 InterPro:IPR006028
InterPro:IPR006029 InterPro:IPR006201 InterPro:IPR006202
InterPro:IPR018000 Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252
PRINTS:PR00253 PRINTS:PR01620 PRINTS:PR01623 PROSITE:PS00236
RGD:621735 GO:GO:0005886 GO:GO:0042493 GO:GO:0030054 GO:GO:0045211
GO:GO:0005230 GO:GO:0004890 Gene3D:2.70.170.10 PANTHER:PTHR18945
SUPFAM:SSF90112 SUPFAM:SSF63712 TIGRFAMs:TIGR00860 GO:GO:0007214
GO:GO:0034707 GO:GO:0005254 HOGENOM:HOG000231337 HOVERGEN:HBG051707
GeneTree:ENSGT00540000070314 KO:K05186 CTD:2567 eggNOG:NOG300758
OMA:RGRIHID EMBL:M81142 EMBL:X63324 IPI:IPI00200810 PIR:S19317
RefSeq:NP_077346.3 UniGene:Rn.10369 ProteinModelPortal:P28473
SMR:P28473 Ensembl:ENSRNOT00000019971 GeneID:79211 KEGG:rno:79211
UCSC:RGD:621735 InParanoid:P28473 BindingDB:P28473 ChEMBL:CHEMBL336
NextBio:614604 ArrayExpress:P28473 Genevestigator:P28473
GermOnline:ENSRNOG00000014862 Uniprot:P28473
Length = 467
Score = 221 (82.9 bits), Expect = 1.2e-22, Sum P(2) = 1.2e-22
Identities = 42/99 (42%), Positives = 62/99 (62%)
Query: 100 YSSLTLTFILNRQYGFYLMDFYAPSILLVCISWVSFWMAPDAVPGRTILGASTMLTFFQL 159
Y +T+ F L+R+ G++ + Y P IL V +SWVSFW+ DA P RT LG +T+LT L
Sbjct: 240 YVVMTIYFELSRRMGYFTIQTYIPCILTVVLSWVSFWIKKDATPARTTLGITTVLTMTTL 299
Query: 160 GIETGSSLPNVSYIRSNDVWFFACTVFIFLSLAEFAFVN 198
SLP VSY+ + D++ C +F+F +L E+A +N
Sbjct: 300 STIARKSLPRVSYVTAMDLFVTVCFLFVFAALMEYATLN 338
Score = 69 (29.3 bits), Expect = 1.2e-22, Sum P(2) = 1.2e-22
Identities = 18/81 (22%), Positives = 33/81 (40%)
Query: 14 SFQQEFKVQLLLQLHWKDPRLEYRHYAPHITEMVGERNFIQNIWTPHIYLTNERDSLVLG 73
S E+++ + W D RL + +T N + IW P N + +
Sbjct: 87 SINMEYQIDIFFAQTWTDSRLRFNSTMKILTL---NSNMVGLIWIPDTIFRNSKTAEAHW 143
Query: 74 LYRRDMLVSILPDGDMLFSTR 94
+ + L+ I DG +L++ R
Sbjct: 144 ITTPNQLLRIWNDGKILYTLR 164
>UNIPROTKB|F1NAX6 [details] [associations]
symbol:GABRA3 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0004890 "GABA-A receptor activity"
evidence=IEA] [GO:0005230 "extracellular ligand-gated ion channel
activity" evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0016021 "integral to membrane" evidence=IEA] [GO:0030054 "cell
junction" evidence=IEA] [GO:0045211 "postsynaptic membrane"
evidence=IEA] InterPro:IPR001390 InterPro:IPR006028
InterPro:IPR006029 InterPro:IPR006201 InterPro:IPR006202
InterPro:IPR018000 Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252
PRINTS:PR00253 PRINTS:PR01079 PROSITE:PS00236 GO:GO:0016021
GO:GO:0005886 GO:GO:0030054 GO:GO:0045211 GO:GO:0005230
GO:GO:0004890 Gene3D:2.70.170.10 PANTHER:PTHR18945 SUPFAM:SSF90112
SUPFAM:SSF63712 TIGRFAMs:TIGR00860 GeneTree:ENSGT00550000074441
OMA:ASPKTTY EMBL:AADN02013489 IPI:IPI00583603
Ensembl:ENSGALT00000011779 Uniprot:F1NAX6
Length = 443
Score = 214 (80.4 bits), Expect = 1.2e-22, Sum P(2) = 1.2e-22
Identities = 45/106 (42%), Positives = 64/106 (60%)
Query: 94 RSRAYMYSSLTLTFILNRQYGFYLMDFYAPSILLVCISWVSFWMAPDAVPGRTILGASTM 153
RS Y +T F L R+ G++++ Y P I+ V +S VSFW+ ++VP RT+ G +T+
Sbjct: 209 RSSTGEYVVMTTHFHLKRKIGYFVIQTYLPCIMTVILSQVSFWLNRESVPARTVFGVTTV 268
Query: 154 LTFFQLGIETGSSLPNVSYIRSNDVWFFA-CTVFIFLSLAEFAFVN 198
LT L I +SLP V+Y + D WF A C F+F +L EFA VN
Sbjct: 269 LTMTTLSISARNSLPKVAYATAMD-WFIAVCYAFVFSALIEFATVN 313
Score = 75 (31.5 bits), Expect = 1.2e-22, Sum P(2) = 1.2e-22
Identities = 17/78 (21%), Positives = 41/78 (52%)
Query: 18 EFKVQLLLQLHWKDPRLEYRHYAPHITEMVGERNFIQN-IWTPHIYLTNERDSLVLGLYR 76
E+ + + + W+D RL++ P +++ N + + IWTP + N + S+ +
Sbjct: 64 EYTIDVFFRQSWRDERLKFD--GP--MKILPLNNLLASKIWTPDTFFHNGKKSVAHNMTT 119
Query: 77 RDMLVSILPDGDMLFSTR 94
+ L+ ++ +G +L++ R
Sbjct: 120 PNKLLRLVDNGTLLYTMR 137
>UNIPROTKB|F1S3S9 [details] [associations]
symbol:GABRG1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0007268 "synaptic transmission" evidence=IEA]
[GO:0045211 "postsynaptic membrane" evidence=IEA] [GO:0030054 "cell
junction" evidence=IEA] [GO:0016021 "integral to membrane"
evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0007214 "gamma-aminobutyric acid signaling pathway"
evidence=IEA] [GO:0006821 "chloride transport" evidence=IEA]
[GO:0005230 "extracellular ligand-gated ion channel activity"
evidence=IEA] [GO:0004890 "GABA-A receptor activity" evidence=IEA]
InterPro:IPR005437 InterPro:IPR005438 InterPro:IPR006028
InterPro:IPR006029 InterPro:IPR006201 InterPro:IPR006202
InterPro:IPR018000 Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252
PRINTS:PR00253 PRINTS:PR01620 PRINTS:PR01621 PROSITE:PS00236
GO:GO:0016021 GO:GO:0005886 GO:GO:0007268 GO:GO:0030054
GO:GO:0045211 GO:GO:0005230 GO:GO:0004890 Gene3D:2.70.170.10
PANTHER:PTHR18945 SUPFAM:SSF90112 SUPFAM:SSF63712
TIGRFAMs:TIGR00860 GO:GO:0007214 GO:GO:0006821
GeneTree:ENSGT00540000070314 OMA:HYFTSNK EMBL:CU856397
EMBL:FP312872 Ensembl:ENSSSCT00000009639 Uniprot:F1S3S9
Length = 442
Score = 216 (81.1 bits), Expect = 1.5e-22, Sum P(2) = 1.5e-22
Identities = 41/95 (43%), Positives = 60/95 (63%)
Query: 100 YSSLTLTFILNRQYGFYLMDFYAPSILLVCISWVSFWMAPDAVPGRTILGASTMLTFFQL 159
Y +T+ F L+R+ G++ + Y P IL V +SWVSFW+ DAVP RT LG +T+LT L
Sbjct: 234 YIIMTIFFDLSRRMGYFTIQTYIPCILTVVLSWVSFWINKDAVPARTSLGITTVLTMTTL 293
Query: 160 GIETGSSLPNVSYIRSNDVWFFACTVFIFLSLAEF 194
SLP VSY+ + D++ C +F+F +L E+
Sbjct: 294 STIARKSLPKVSYVTAMDLFVSVCFIFVFAALMEY 328
Score = 72 (30.4 bits), Expect = 1.5e-22, Sum P(2) = 1.5e-22
Identities = 19/77 (24%), Positives = 35/77 (45%)
Query: 18 EFKVQLLLQLHWKDPRLEYRHYAPHITEMVGERNFIQNIWTPHIYLTNERDSLVLGLYRR 77
E+ + ++ W D RL++ + M+ N + IW P + N R S +
Sbjct: 85 EYTIDIIFAQTWFDSRLKFNSTMKVL--MLNS-NMVGKIWIPDTFFRNSRKSDAHWITTP 141
Query: 78 DMLVSILPDGDMLFSTR 94
+ L+ I DG +L++ R
Sbjct: 142 NRLLRIWNDGRVLYTLR 158
>MGI|MGI:103156 [details] [associations]
symbol:Gabrg1 "gamma-aminobutyric acid (GABA) A receptor,
subunit gamma 1" species:10090 "Mus musculus" [GO:0004890 "GABA-A
receptor activity" evidence=ISO] [GO:0005216 "ion channel activity"
evidence=IEA] [GO:0005230 "extracellular ligand-gated ion channel
activity" evidence=IEA] [GO:0005254 "chloride channel activity"
evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0006810 "transport" evidence=IEA] [GO:0006811 "ion transport"
evidence=IEA] [GO:0006821 "chloride transport" evidence=IEA]
[GO:0007214 "gamma-aminobutyric acid signaling pathway"
evidence=IEA] [GO:0007268 "synaptic transmission" evidence=IDA]
[GO:0016020 "membrane" evidence=ISO] [GO:0016021 "integral to
membrane" evidence=IEA] [GO:0030054 "cell junction" evidence=IEA]
[GO:0034707 "chloride channel complex" evidence=IEA] [GO:0043235
"receptor complex" evidence=ISO] [GO:0045202 "synapse"
evidence=IEA] [GO:0045211 "postsynaptic membrane" evidence=IEA]
[GO:0050811 "GABA receptor binding" evidence=ISO]
InterPro:IPR005437 InterPro:IPR005438 InterPro:IPR006028
InterPro:IPR006029 InterPro:IPR006201 InterPro:IPR006202
InterPro:IPR018000 Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252
PRINTS:PR00253 PRINTS:PR01620 PRINTS:PR01621 PROSITE:PS00236
MGI:MGI:103156 GO:GO:0005886 GO:GO:0007268 GO:GO:0030054
GO:GO:0045211 GO:GO:0005230 GO:GO:0004890 Gene3D:2.70.170.10
PANTHER:PTHR18945 SUPFAM:SSF90112 SUPFAM:SSF63712
TIGRFAMs:TIGR00860 GO:GO:0007214 EMBL:CH466524 GO:GO:0034707
GO:GO:0005254 eggNOG:NOG238757 HOGENOM:HOG000231337
HOVERGEN:HBG051707 GeneTree:ENSGT00540000070314 CTD:2565 KO:K05186
OMA:HYFTSNK OrthoDB:EOG44BB25 EMBL:X55272 EMBL:AK034332
EMBL:AK047752 EMBL:AK049956 EMBL:AK038468 EMBL:AC068252
EMBL:AC092716 EMBL:BC099939 IPI:IPI00308300 IPI:IPI00387194
RefSeq:NP_034382.2 UniGene:Mm.255292 ProteinModelPortal:Q9R0Y8
STRING:Q9R0Y8 PhosphoSite:Q9R0Y8 PRIDE:Q9R0Y8
Ensembl:ENSMUST00000031119 GeneID:14405 KEGG:mmu:14405
BindingDB:Q9R0Y8 ChEMBL:CHEMBL2891 NextBio:285967
Genevestigator:Q9R0Y8 GermOnline:ENSMUSG00000001260 Uniprot:Q9R0Y8
Length = 465
Score = 216 (81.1 bits), Expect = 1.6e-22, Sum P(2) = 1.6e-22
Identities = 41/95 (43%), Positives = 60/95 (63%)
Query: 100 YSSLTLTFILNRQYGFYLMDFYAPSILLVCISWVSFWMAPDAVPGRTILGASTMLTFFQL 159
Y +T+ F L+R+ G++ + Y P IL V +SWVSFW+ DAVP RT LG +T+LT L
Sbjct: 257 YIIMTIFFDLSRRMGYFTIQTYIPCILTVVLSWVSFWINKDAVPARTSLGITTVLTMTTL 316
Query: 160 GIETGSSLPNVSYIRSNDVWFFACTVFIFLSLAEF 194
SLP VSY+ + D++ C +F+F +L E+
Sbjct: 317 STIARKSLPKVSYVTAMDLFVSVCFIFVFAALMEY 351
Score = 73 (30.8 bits), Expect = 1.6e-22, Sum P(2) = 1.6e-22
Identities = 19/77 (24%), Positives = 35/77 (45%)
Query: 18 EFKVQLLLQLHWKDPRLEYRHYAPHITEMVGERNFIQNIWTPHIYLTNERDSLVLGLYRR 77
E+ + ++ W D RL++ + M+ N + IW P + N R S +
Sbjct: 108 EYTIDIIFAQTWFDSRLKFNSTMKVL--MLNS-NMVGKIWIPDTFFRNSRKSDAHWITTP 164
Query: 78 DMLVSILPDGDMLFSTR 94
+ L+ I DG +L++ R
Sbjct: 165 NRLLRIWSDGRVLYTLR 181
>RGD|621732 [details] [associations]
symbol:Gabrg1 "gamma-aminobutyric acid (GABA) A receptor, gamma
1" species:10116 "Rattus norvegicus" [GO:0004890 "GABA-A receptor
activity" evidence=IDA] [GO:0005230 "extracellular ligand-gated ion
channel activity" evidence=IEA] [GO:0005254 "chloride channel
activity" evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0007214 "gamma-aminobutyric acid signaling pathway"
evidence=IEA] [GO:0007268 "synaptic transmission" evidence=IEA;ISO]
[GO:0016020 "membrane" evidence=IDA] [GO:0030054 "cell junction"
evidence=IEA] [GO:0034707 "chloride channel complex" evidence=IEA]
[GO:0043235 "receptor complex" evidence=IDA] [GO:0045211
"postsynaptic membrane" evidence=IEA] [GO:0050811 "GABA receptor
binding" evidence=IPI] InterPro:IPR005437 InterPro:IPR005438
InterPro:IPR006028 InterPro:IPR006029 InterPro:IPR006201
InterPro:IPR006202 InterPro:IPR018000 Pfam:PF02931 Pfam:PF02932
PRINTS:PR00252 PRINTS:PR00253 PRINTS:PR01620 PRINTS:PR01621
PROSITE:PS00236 RGD:621732 GO:GO:0005886 GO:GO:0016020
GO:GO:0007268 GO:GO:0030054 GO:GO:0045211 GO:GO:0005230
GO:GO:0004890 Gene3D:2.70.170.10 PANTHER:PTHR18945 SUPFAM:SSF90112
SUPFAM:SSF63712 TIGRFAMs:TIGR00860 GO:GO:0007214 GO:GO:0043235
GO:GO:0034707 GO:GO:0005254 eggNOG:NOG238757 HOGENOM:HOG000231337
HOVERGEN:HBG051707 GeneTree:ENSGT00540000070314 CTD:2565 KO:K05186
OMA:HYFTSNK OrthoDB:EOG44BB25 EMBL:X57514 IPI:IPI00211960
PIR:S12056 RefSeq:NP_542153.1 UniGene:Rn.10366
ProteinModelPortal:P23574 STRING:P23574 PRIDE:P23574
Ensembl:ENSRNOT00000003240 GeneID:140674 KEGG:rno:140674
UCSC:RGD:621732 InParanoid:P23574 BindingDB:P23574 ChEMBL:CHEMBL296
NextBio:620667 Genevestigator:P23574 GermOnline:ENSRNOG00000002360
Uniprot:P23574
Length = 465
Score = 216 (81.1 bits), Expect = 1.6e-22, Sum P(2) = 1.6e-22
Identities = 41/95 (43%), Positives = 60/95 (63%)
Query: 100 YSSLTLTFILNRQYGFYLMDFYAPSILLVCISWVSFWMAPDAVPGRTILGASTMLTFFQL 159
Y +T+ F L+R+ G++ + Y P IL V +SWVSFW+ DAVP RT LG +T+LT L
Sbjct: 257 YIIMTIFFDLSRRMGYFTIQTYIPCILTVVLSWVSFWINKDAVPARTSLGITTVLTMTTL 316
Query: 160 GIETGSSLPNVSYIRSNDVWFFACTVFIFLSLAEF 194
SLP VSY+ + D++ C +F+F +L E+
Sbjct: 317 STIARKSLPKVSYVTAMDLFVSVCFIFVFAALMEY 351
Score = 73 (30.8 bits), Expect = 1.6e-22, Sum P(2) = 1.6e-22
Identities = 19/77 (24%), Positives = 35/77 (45%)
Query: 18 EFKVQLLLQLHWKDPRLEYRHYAPHITEMVGERNFIQNIWTPHIYLTNERDSLVLGLYRR 77
E+ + ++ W D RL++ + M+ N + IW P + N R S +
Sbjct: 108 EYTIDIIFAQTWFDSRLKFNSTMKVL--MLNS-NMVGKIWIPDTFFRNSRKSDAHWITTP 164
Query: 78 DMLVSILPDGDMLFSTR 94
+ L+ I DG +L++ R
Sbjct: 165 NRLLRIWSDGRVLYTLR 181
>UNIPROTKB|E1C890 [details] [associations]
symbol:GABRA4 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0004890 "GABA-A receptor activity"
evidence=IEA] [GO:0005230 "extracellular ligand-gated ion channel
activity" evidence=IEA] [GO:0006821 "chloride transport"
evidence=IEA] [GO:0007214 "gamma-aminobutyric acid signaling
pathway" evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0016021 "integral to membrane" evidence=IEA] [GO:0030054 "cell
junction" evidence=IEA] [GO:0045211 "postsynaptic membrane"
evidence=IEA] [GO:0007417 "central nervous system development"
evidence=IEA] [GO:2001023 "regulation of response to drug"
evidence=IEA] InterPro:IPR001390 InterPro:IPR005434
InterPro:IPR006028 InterPro:IPR006029 InterPro:IPR006201
InterPro:IPR006202 InterPro:IPR018000 Pfam:PF02931 Pfam:PF02932
PRINTS:PR00252 PRINTS:PR00253 PRINTS:PR01079 PRINTS:PR01617
PROSITE:PS00236 GO:GO:0016021 GO:GO:0005886 GO:GO:0030054
GO:GO:0045211 GO:GO:0005230 GO:GO:0004890 Gene3D:2.70.170.10
PANTHER:PTHR18945 SUPFAM:SSF90112 SUPFAM:SSF63712
TIGRFAMs:TIGR00860 GO:GO:0007214 GO:GO:0006821 CTD:2557 KO:K05175
GeneTree:ENSGT00550000074441 GO:GO:2001023 OMA:KEPAIAM
EMBL:AADN02031278 IPI:IPI00602335 RefSeq:XP_420724.2
ProteinModelPortal:E1C890 Ensembl:ENSGALT00000022968 GeneID:422770
KEGG:gga:422770 NextBio:20825357 Uniprot:E1C890
Length = 554
Score = 214 (80.4 bits), Expect = 1.8e-22, Sum P(2) = 1.8e-22
Identities = 44/100 (44%), Positives = 62/100 (62%)
Query: 100 YSSLTLTFILNRQYGFYLMDFYAPSILLVCISWVSFWMAPDAVPGRTILGASTMLTFFQL 159
Y +T+ F L R+ G++++ Y P I+ V +S VSFW+ ++VP RT+ G +T+LT L
Sbjct: 242 YIVMTVYFHLRRKMGYFMIQTYIPCIMTVILSQVSFWINKESVPARTVFGITTVLTMTTL 301
Query: 160 GIETGSSLPNVSYIRSNDVWFFA-CTVFIFLSLAEFAFVN 198
I SLP VSY + D WF A C F+F +L EFA VN
Sbjct: 302 SISARHSLPKVSYATAMD-WFIAVCFAFVFSALIEFAAVN 340
Score = 78 (32.5 bits), Expect = 1.8e-22, Sum P(2) = 1.8e-22
Identities = 19/80 (23%), Positives = 39/80 (48%)
Query: 16 QQEFKVQLLLQLHWKDPRLEYRHYAPHITEMVGERNF-IQNIWTPHIYLTNERDSLVLGL 74
+ E+ + + + W D RL+Y P E++ N + +WTP + N + S+ +
Sbjct: 89 EMEYTMDVFFRQTWVDKRLKYD--GP--IEILRLNNLMVSKVWTPDTFFRNGKKSVAHNM 144
Query: 75 YRRDMLVSILPDGDMLFSTR 94
+ L I+ +G +L++ R
Sbjct: 145 TAPNKLFRIMRNGTILYTMR 164
>ZFIN|ZDB-GENE-050417-360 [details] [associations]
symbol:zgc:110204 "zgc:110204" species:7955 "Danio
rerio" [GO:0005216 "ion channel activity" evidence=IEA] [GO:0006810
"transport" evidence=IEA] [GO:0006811 "ion transport" evidence=IEA]
[GO:0016020 "membrane" evidence=IEA] [GO:0016021 "integral to
membrane" evidence=IEA] [GO:0045211 "postsynaptic membrane"
evidence=IEA] [GO:0005230 "extracellular ligand-gated ion channel
activity" evidence=IEA] [GO:0004890 "GABA-A receptor activity"
evidence=IEA] [GO:0030054 "cell junction" evidence=IEA] [GO:0005886
"plasma membrane" evidence=IEA] [GO:0045202 "synapse" evidence=IEA]
InterPro:IPR001390 InterPro:IPR006028 InterPro:IPR006029
InterPro:IPR006201 InterPro:IPR006202 InterPro:IPR018000
Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252 PRINTS:PR00253
PRINTS:PR01079 PROSITE:PS00236 ZFIN:ZDB-GENE-050417-360
GO:GO:0016021 GO:GO:0005886 GO:GO:0030054 GO:GO:0045211
GO:GO:0005230 GO:GO:0004890 Gene3D:2.70.170.10 PANTHER:PTHR18945
SUPFAM:SSF90112 SUPFAM:SSF63712 TIGRFAMs:TIGR00860 KO:K05175
eggNOG:NOG238757 HOGENOM:HOG000231337 HOVERGEN:HBG051707
OrthoDB:EOG4MPHQ4 EMBL:BC092794 IPI:IPI00512589
RefSeq:NP_001017822.1 UniGene:Dr.116107 UniGene:Dr.150874
ProteinModelPortal:Q568M9 SMR:Q568M9 GeneID:550520 KEGG:dre:550520
NextBio:20879762 Uniprot:Q568M9
Length = 557
Score = 214 (80.4 bits), Expect = 1.8e-22, Sum P(2) = 1.8e-22
Identities = 44/100 (44%), Positives = 62/100 (62%)
Query: 100 YSSLTLTFILNRQYGFYLMDFYAPSILLVCISWVSFWMAPDAVPGRTILGASTMLTFFQL 159
Y +T+ F L R+ G++++ Y P I+ V +S VSFW+ ++VP RT+ G +T+LT L
Sbjct: 243 YVVMTVYFHLKRKMGYFMIQTYIPCIMTVILSQVSFWINKESVPARTVFGITTVLTMTTL 302
Query: 160 GIETGSSLPNVSYIRSNDVWFFA-CTVFIFLSLAEFAFVN 198
I SLP VSY + D WF A C F+F +L EFA VN
Sbjct: 303 SISARHSLPKVSYATAMD-WFIAVCFAFVFSALIEFAAVN 341
Score = 78 (32.5 bits), Expect = 1.8e-22, Sum P(2) = 1.8e-22
Identities = 19/80 (23%), Positives = 38/80 (47%)
Query: 16 QQEFKVQLLLQLHWKDPRLEYRHYAPHITEMVGERNF-IQNIWTPHIYLTNERDSLVLGL 74
+ E+ + + + W D RL Y P E++ N + +WTP + N + S+ +
Sbjct: 90 EMEYTMDVFFRQTWVDRRLRYE--GP--VEILRLNNLMVTKVWTPDTFFRNGKRSVAHNM 145
Query: 75 YRRDMLVSILPDGDMLFSTR 94
+ L I+ +G +L++ R
Sbjct: 146 TAPNRLFRIMKNGTILYTMR 165
>UNIPROTKB|Q8N1C3 [details] [associations]
symbol:GABRG1 "Gamma-aminobutyric acid receptor subunit
gamma-1" species:9606 "Homo sapiens" [GO:0005230 "extracellular
ligand-gated ion channel activity" evidence=IEA] [GO:0007214
"gamma-aminobutyric acid signaling pathway" evidence=IEA]
[GO:0005254 "chloride channel activity" evidence=IEA] [GO:0030054
"cell junction" evidence=IEA] [GO:0034707 "chloride channel
complex" evidence=IEA] [GO:0004890 "GABA-A receptor activity"
evidence=IEA] [GO:0007268 "synaptic transmission" evidence=IEA]
[GO:0043235 "receptor complex" evidence=IEA] [GO:0050811 "GABA
receptor binding" evidence=IEA] [GO:0005886 "plasma membrane"
evidence=IEA] [GO:0045211 "postsynaptic membrane" evidence=IEA]
InterPro:IPR005437 InterPro:IPR005438 InterPro:IPR006028
InterPro:IPR006029 InterPro:IPR006201 InterPro:IPR006202
InterPro:IPR018000 Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252
PRINTS:PR00253 PRINTS:PR01620 PRINTS:PR01621 PROSITE:PS00236
GO:GO:0005886 GO:GO:0007268 GO:GO:0030054 GO:GO:0045211
GO:GO:0005230 GO:GO:0004890 Gene3D:2.70.170.10 PANTHER:PTHR18945
SUPFAM:SSF90112 SUPFAM:SSF63712 TIGRFAMs:TIGR00860 GO:GO:0007214
GO:GO:0034707 GO:GO:0005254 EMBL:CH471069 eggNOG:NOG238757
HOGENOM:HOG000231337 HOVERGEN:HBG051707 EMBL:AK122845 EMBL:CR933628
EMBL:BC031087 IPI:IPI00166138 RefSeq:NP_775807.2 UniGene:Hs.375051
ProteinModelPortal:Q8N1C3 SMR:Q8N1C3 STRING:Q8N1C3
PhosphoSite:Q8N1C3 DMDM:209572630 PRIDE:Q8N1C3 DNASU:2565
Ensembl:ENST00000295452 GeneID:2565 KEGG:hsa:2565 UCSC:uc003gxb.3
CTD:2565 GeneCards:GC04M045953 HGNC:HGNC:4086 HPA:HPA035622
MIM:137166 neXtProt:NX_Q8N1C3 PharmGKB:PA28500 InParanoid:Q8N1C3
KO:K05186 OMA:HYFTSNK OrthoDB:EOG44BB25 PhylomeDB:Q8N1C3
BindingDB:Q8N1C3 ChEMBL:CHEMBL4044 GenomeRNAi:2565 NextBio:10141
ArrayExpress:Q8N1C3 Bgee:Q8N1C3 CleanEx:HS_GABRG1
Genevestigator:Q8N1C3 GermOnline:ENSG00000163285 Uniprot:Q8N1C3
Length = 465
Score = 216 (81.1 bits), Expect = 2.0e-22, Sum P(2) = 2.0e-22
Identities = 41/95 (43%), Positives = 60/95 (63%)
Query: 100 YSSLTLTFILNRQYGFYLMDFYAPSILLVCISWVSFWMAPDAVPGRTILGASTMLTFFQL 159
Y +T+ F L+R+ G++ + Y P IL V +SWVSFW+ DAVP RT LG +T+LT L
Sbjct: 257 YVIMTIFFDLSRRMGYFTIQTYIPCILTVVLSWVSFWINKDAVPARTSLGITTVLTMTTL 316
Query: 160 GIETGSSLPNVSYIRSNDVWFFACTVFIFLSLAEF 194
SLP VSY+ + D++ C +F+F +L E+
Sbjct: 317 STIARKSLPKVSYVTAMDLFVSVCFIFVFAALMEY 351
Score = 72 (30.4 bits), Expect = 2.0e-22, Sum P(2) = 2.0e-22
Identities = 19/77 (24%), Positives = 35/77 (45%)
Query: 18 EFKVQLLLQLHWKDPRLEYRHYAPHITEMVGERNFIQNIWTPHIYLTNERDSLVLGLYRR 77
E+ + ++ W D RL++ + M+ N + IW P + N R S +
Sbjct: 108 EYTIDIIFAQTWFDSRLKFNSTMKVL--MLNS-NMVGKIWIPDTFFRNSRKSDAHWITTP 164
Query: 78 DMLVSILPDGDMLFSTR 94
+ L+ I DG +L++ R
Sbjct: 165 NRLLRIWNDGRVLYTLR 181
>UNIPROTKB|E2RH22 [details] [associations]
symbol:GABRG1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0045211 "postsynaptic membrane" evidence=IEA]
[GO:0030054 "cell junction" evidence=IEA] [GO:0016021 "integral to
membrane" evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0007214 "gamma-aminobutyric acid signaling pathway"
evidence=IEA] [GO:0006821 "chloride transport" evidence=IEA]
[GO:0005230 "extracellular ligand-gated ion channel activity"
evidence=IEA] [GO:0004890 "GABA-A receptor activity" evidence=IEA]
InterPro:IPR005437 InterPro:IPR005438 InterPro:IPR006028
InterPro:IPR006029 InterPro:IPR006201 InterPro:IPR006202
InterPro:IPR018000 Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252
PRINTS:PR00253 PRINTS:PR01620 PRINTS:PR01621 PROSITE:PS00236
GO:GO:0016021 GO:GO:0005886 GO:GO:0030054 GO:GO:0045211
GO:GO:0005230 GO:GO:0004890 Gene3D:2.70.170.10 PANTHER:PTHR18945
SUPFAM:SSF90112 SUPFAM:SSF63712 TIGRFAMs:TIGR00860 GO:GO:0007214
GO:GO:0006821 GeneTree:ENSGT00540000070314 OMA:HYFTSNK
EMBL:AAEX03009032 Ensembl:ENSCAFT00000002978 Uniprot:E2RH22
Length = 468
Score = 216 (81.1 bits), Expect = 2.1e-22, Sum P(2) = 2.1e-22
Identities = 41/95 (43%), Positives = 60/95 (63%)
Query: 100 YSSLTLTFILNRQYGFYLMDFYAPSILLVCISWVSFWMAPDAVPGRTILGASTMLTFFQL 159
Y +T+ F L+R+ G++ + Y P IL V +SWVSFW+ DAVP RT LG +T+LT L
Sbjct: 260 YIIMTIFFDLSRRMGYFTIQTYIPCILTVVLSWVSFWINKDAVPARTSLGITTVLTMTTL 319
Query: 160 GIETGSSLPNVSYIRSNDVWFFACTVFIFLSLAEF 194
SLP VSY+ + D++ C +F+F +L E+
Sbjct: 320 STIARKSLPKVSYVTAMDLFVSVCFIFVFAALMEY 354
Score = 72 (30.4 bits), Expect = 2.1e-22, Sum P(2) = 2.1e-22
Identities = 19/77 (24%), Positives = 35/77 (45%)
Query: 18 EFKVQLLLQLHWKDPRLEYRHYAPHITEMVGERNFIQNIWTPHIYLTNERDSLVLGLYRR 77
E+ + ++ W D RL++ + M+ N + IW P + N R S +
Sbjct: 111 EYTIDIIFAQTWFDSRLKFNSTMKVL--MLNS-NMVGKIWIPDTFFRNSRKSDAHWITTP 167
Query: 78 DMLVSILPDGDMLFSTR 94
+ L+ I DG +L++ R
Sbjct: 168 NRLLRIWNDGRVLYTLR 184
>FB|FBgn0037950 [details] [associations]
symbol:HisCl1 "Histamine-gated chloride channel subunit 1"
species:7227 "Drosophila melanogaster" [GO:0016933
"extracellular-glycine-gated ion channel activity" evidence=ISS]
[GO:0019182 "histamine-gated chloride channel activity"
evidence=NAS] [GO:0019183 "histamine-gated chloride channel
complex" evidence=NAS] [GO:0006811 "ion transport" evidence=IEA]
[GO:0045211 "postsynaptic membrane" evidence=IEA] [GO:0016021
"integral to membrane" evidence=IEA] [GO:0043052 "thermotaxis"
evidence=IMP] InterPro:IPR006028 InterPro:IPR006029
InterPro:IPR006201 InterPro:IPR006202 InterPro:IPR018000
Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252 PRINTS:PR00253
PROSITE:PS00236 GO:GO:0016021 GO:GO:0005886 GO:GO:0030054
GO:GO:0045211 GO:GO:0005230 Gene3D:2.70.170.10 PANTHER:PTHR18945
SUPFAM:SSF90112 SUPFAM:SSF63712 GO:GO:0043052 HSSP:P23415
InterPro:IPR015680 PANTHER:PTHR18945:SF26 FlyBase:FBgn0037950
EMBL:AF467953 ProteinModelPortal:Q8T9R9 SMR:Q8T9R9 STRING:Q8T9R9
PRIDE:Q8T9R9 InParanoid:Q8T9R9 OrthoDB:EOG41G1KM
ArrayExpress:Q8T9R9 Bgee:Q8T9R9 Uniprot:Q8T9R9
Length = 426
Score = 262 (97.3 bits), Expect = 2.7e-22, P = 2.7e-22
Identities = 57/170 (33%), Positives = 98/170 (57%)
Query: 34 LEYRHYAPHITEMVGER-NFIQNIWTPHIYLTNERDSLVLG----LYRRDMLVSILPDGD 88
L++ Y PH T++ + + +++ N D LV+ L + D+ + D
Sbjct: 184 LKFESY-PHDTQICSMMIESLSHTVEDLVFIWNMTDPLVVNTEIELPQLDISNNYTTDCT 242
Query: 89 MLFSTRSRAYMYSSLTLTFILNRQYGFYLMDFYAPSILLVCISWVSFWMAPDAVPGRTIL 148
+ +ST + ++ L + F L R+ G++L Y PS L+V +SW+SFW+ P+A+P R +
Sbjct: 243 IEYSTGN----FTCLAIVFNLRRRLGYHLFHTYIPSALIVVMSWISFWIKPEAIPARVTV 298
Query: 149 GASTMLTFFQLGIETGSSLPNVSYIRSNDVWFFACTVFIFLSLAEFAFVN 198
G +++LT ++ SLP VSY+++ D+W +C+VF+FLSL EFA VN
Sbjct: 299 GVTSLLTLATQNTQSQQSLPPVSYVKAIDIWMSSCSVFVFLSLMEFAVVN 348
>UNIPROTKB|F1P9P9 [details] [associations]
symbol:GABRA4 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0045211 "postsynaptic membrane" evidence=IEA]
[GO:0030054 "cell junction" evidence=IEA] [GO:0016021 "integral to
membrane" evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0007214 "gamma-aminobutyric acid signaling pathway"
evidence=IEA] [GO:0006821 "chloride transport" evidence=IEA]
[GO:0005230 "extracellular ligand-gated ion channel activity"
evidence=IEA] [GO:0004890 "GABA-A receptor activity" evidence=IEA]
InterPro:IPR001390 InterPro:IPR005434 InterPro:IPR006028
InterPro:IPR006029 InterPro:IPR006201 InterPro:IPR006202
InterPro:IPR018000 Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252
PRINTS:PR00253 PRINTS:PR01079 PRINTS:PR01617 PROSITE:PS00236
GO:GO:0016021 GO:GO:0005886 GO:GO:0030054 GO:GO:0045211
GO:GO:0005230 GO:GO:0004890 Gene3D:2.70.170.10 PANTHER:PTHR18945
SUPFAM:SSF90112 SUPFAM:SSF63712 TIGRFAMs:TIGR00860 GO:GO:0007214
GO:GO:0006821 GeneTree:ENSGT00550000074441 OMA:THANLNM
EMBL:AAEX03009036 Ensembl:ENSCAFT00000037915 Uniprot:F1P9P9
Length = 465
Score = 214 (80.4 bits), Expect = 3.3e-22, Sum P(2) = 3.3e-22
Identities = 44/100 (44%), Positives = 62/100 (62%)
Query: 100 YSSLTLTFILNRQYGFYLMDFYAPSILLVCISWVSFWMAPDAVPGRTILGASTMLTFFQL 159
Y +T+ F L R+ G++++ Y P I+ V +S VSFW+ ++VP RT+ G +T+LT L
Sbjct: 153 YIVMTVYFHLRRKMGYFMIQTYIPCIMTVILSQVSFWINKESVPARTVFGITTVLTMTTL 212
Query: 160 GIETGSSLPNVSYIRSNDVWFFA-CTVFIFLSLAEFAFVN 198
I SLP VSY + D WF A C F+F +L EFA VN
Sbjct: 213 SISARHSLPKVSYATAMD-WFIAVCFAFVFSALIEFAAVN 251
Score = 72 (30.4 bits), Expect = 3.3e-22, Sum P(2) = 3.3e-22
Identities = 19/78 (24%), Positives = 38/78 (48%)
Query: 18 EFKVQLLLQLHWKDPRLEYRHYAPHITEMVGERNF-IQNIWTPHIYLTNERDSLVLGLYR 76
E+ + + + W D RL+Y P E++ N + +WTP + N + S+ +
Sbjct: 2 EYTMDVFFRQTWIDKRLKYD--GP--IEILRLNNMMVTKVWTPDTFFRNGKKSVSHNMTA 57
Query: 77 RDMLVSILPDGDMLFSTR 94
+ L I+ +G +L++ R
Sbjct: 58 PNKLFRIMRNGTILYTMR 75
>WB|WBGene00010741 [details] [associations]
symbol:lgc-49 species:6239 "Caenorhabditis elegans"
[GO:0006811 "ion transport" evidence=IEA] [GO:0016021 "integral to
membrane" evidence=IEA] [GO:0016020 "membrane" evidence=IEA]
[GO:0005230 "extracellular ligand-gated ion channel activity"
evidence=IEA] [GO:0006810 "transport" evidence=IEA] [GO:0045211
"postsynaptic membrane" evidence=IEA] InterPro:IPR006028
InterPro:IPR006029 InterPro:IPR006201 InterPro:IPR006202
InterPro:IPR018000 Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252
PRINTS:PR00253 PROSITE:PS00236 GO:GO:0016021 GO:GO:0005886
GO:GO:0030054 GO:GO:0045211 GO:GO:0005230 Gene3D:2.70.170.10
PANTHER:PTHR18945 SUPFAM:SSF90112 SUPFAM:SSF63712
GeneTree:ENSGT00540000070314 HOGENOM:HOG000016259 EMBL:Z74040
PIR:T23576 RefSeq:NP_505841.2 ProteinModelPortal:Q21420 SMR:Q21420
EnsemblMetazoa:K10D6.1.1 EnsemblMetazoa:K10D6.1.2 GeneID:179547
KEGG:cel:CELE_K10D6.1 UCSC:K10D6.1 CTD:179547 WormBase:K10D6.1
eggNOG:NOG291682 InParanoid:Q21420 OMA:FERRYIW NextBio:905880
Uniprot:Q21420
Length = 457
Score = 208 (78.3 bits), Expect = 3.4e-22, Sum P(2) = 3.4e-22
Identities = 49/121 (40%), Positives = 69/121 (57%)
Query: 84 LPDGDMLF--STR-SRAY---MYSSLTLTFILNRQYGFYLMDFYAPSILLVCISWVSFWM 137
LPD +++ STR S Y M+ L + + R+Y +Y M Y P+ L + ISW+SF +
Sbjct: 229 LPDFELIKIESTRISAPYPAGMWDELHVKLVFERRYIWYFMQAYLPTYLTIFISWISFSL 288
Query: 138 APDAVPGRTILGASTMLTF-FQLGIETGSSLPNVSYIRSNDVWFFACTVFIFLSLAEFAF 196
A+P RT+LG + +L FQ G +LP VSY+++ DVW FIFLSL E A
Sbjct: 289 GTKAMPARTMLGVNALLAMIFQFG-NIMRNLPRVSYVKAIDVWMLVSMTFIFLSLLELAI 347
Query: 197 V 197
V
Sbjct: 348 V 348
Score = 78 (32.5 bits), Expect = 3.4e-22, Sum P(2) = 3.4e-22
Identities = 15/77 (19%), Positives = 37/77 (48%)
Query: 18 EFKVQLLLQLHWKDPRLEYRHYAPHITEMVGERNFIQNIWTPHIYLTNERDSLVLGLYRR 77
+F++ + + W DP L++ H P + ++ +WTP+ N + + + +
Sbjct: 98 DFEMDIYINEMWLDPALKFDHLNPCKQNLSVSHQVLEQLWTPNSCFVNSKFAEIHDSPFK 157
Query: 78 DMLVSILPDGDMLFSTR 94
++ + I P+G + + R
Sbjct: 158 NVFLMIYPNGTVWVNYR 174
>ZFIN|ZDB-GENE-081028-62 [details] [associations]
symbol:gabrp "gamma-aminobutyric acid (GABA) A
receptor, pi" species:7955 "Danio rerio" [GO:0005230 "extracellular
ligand-gated ion channel activity" evidence=IEA] [GO:0006811 "ion
transport" evidence=IEA] [GO:0016020 "membrane" evidence=IEA]
[GO:0016021 "integral to membrane" evidence=IEA] [GO:0045211
"postsynaptic membrane" evidence=IEA] [GO:0006810 "transport"
evidence=IEA] [GO:0045202 "synapse" evidence=IEA] [GO:0030054 "cell
junction" evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
InterPro:IPR006028 InterPro:IPR006029 InterPro:IPR006201
InterPro:IPR006202 InterPro:IPR018000 Pfam:PF02931 Pfam:PF02932
PRINTS:PR00252 PRINTS:PR00253 PROSITE:PS00236
ZFIN:ZDB-GENE-081028-62 GO:GO:0016021 GO:GO:0005886 GO:GO:0030054
GO:GO:0045211 GO:GO:0005230 Gene3D:2.70.170.10 PANTHER:PTHR18945
SUPFAM:SSF90112 SUPFAM:SSF63712 TIGRFAMs:TIGR00860
GeneTree:ENSGT00630000089571 EMBL:BX248097 IPI:IPI00495215
ProteinModelPortal:F1Q6Y8 Ensembl:ENSDART00000074819 Uniprot:F1Q6Y8
Length = 464
Score = 210 (79.0 bits), Expect = 3.5e-22, Sum P(2) = 3.5e-22
Identities = 42/98 (42%), Positives = 63/98 (64%)
Query: 99 MYSSLTLTFILNRQYGFYLMDFYAPSILLVCISWVSFWMAPDAVPGRTILGASTMLTFFQ 158
+Y L L F L R F++++ Y PS LLV +SWVSFW++ +VP RT +G +T+LT
Sbjct: 245 LYPKLILHFALRRNVLFFILETYVPSTLLVVLSWVSFWISQSSVPARTCIGVTTVLTMTT 304
Query: 159 LGIETGSSLPNVS-YIRSNDVWFFACTVFIFLSLAEFA 195
L + +SLPN + +I++ DV+ C FIF +L E+A
Sbjct: 305 LMMGARTSLPNANCFIKAIDVYLGICFTFIFGALLEYA 342
Score = 76 (31.8 bits), Expect = 3.5e-22, Sum P(2) = 3.5e-22
Identities = 19/96 (19%), Positives = 47/96 (48%)
Query: 18 EFKVQLLLQLHWKDPRLEYRHYAPHITEMVGERNFIQNIWTPHIYLTNERDSLVLGLYRR 77
++ + L+ W+D RL + P + + + +W P ++ + + S + +
Sbjct: 98 DYTATIFLRQRWRDSRLIF----PGNESLSLDGRLVSLLWIPDTFIPDSKRSFLHDVTVE 153
Query: 78 DMLVSILPDGDMLFSTRSRAYMYSSLTLT-FILNRQ 112
+ L+ I +G +L++ R A + ++ LT + ++RQ
Sbjct: 154 NRLIRIFSNGTVLYALRITATIACNMDLTKYPMDRQ 189
>WB|WBGene00008223 [details] [associations]
symbol:lgc-48 species:6239 "Caenorhabditis elegans"
[GO:0006811 "ion transport" evidence=IEA] [GO:0016021 "integral to
membrane" evidence=IEA] [GO:0016020 "membrane" evidence=IEA]
[GO:0005230 "extracellular ligand-gated ion channel activity"
evidence=IEA] [GO:0006810 "transport" evidence=IEA] [GO:0045211
"postsynaptic membrane" evidence=IEA] [GO:0009792 "embryo
development ending in birth or egg hatching" evidence=IMP]
InterPro:IPR006028 InterPro:IPR006029 InterPro:IPR006201
InterPro:IPR006202 InterPro:IPR018000 Pfam:PF02931 Pfam:PF02932
PRINTS:PR00252 PRINTS:PR00253 PROSITE:PS00236 GO:GO:0016021
GO:GO:0005886 GO:GO:0009792 GO:GO:0030054 GO:GO:0045211
GO:GO:0005230 Gene3D:2.70.170.10 PANTHER:PTHR18945 SUPFAM:SSF90112
SUPFAM:SSF63712 GeneTree:ENSGT00540000070314 HOGENOM:HOG000016259
EMBL:Z81050 RefSeq:NP_506308.3 UniGene:Cel.26142
ProteinModelPortal:P91985 SMR:P91985 EnsemblMetazoa:C50B6.11
GeneID:183638 KEGG:cel:CELE_C50B6.11 UCSC:C50B6.11 CTD:183638
WormBase:C50B6.11 eggNOG:NOG244666 InParanoid:P91985 OMA:ITPRTMI
NextBio:921838 Uniprot:P91985
Length = 366
Score = 201 (75.8 bits), Expect = 4.1e-22, Sum P(2) = 4.1e-22
Identities = 38/102 (37%), Positives = 61/102 (59%)
Query: 97 AYMYSSLTLTFILNRQYGFYLMDFYAPSILLVCISWVSFWMAPDAVPGRTILGASTMLTF 156
A ++ L +TF+ R+Y +Y + Y P+ + ISW++F + P A+ RT++G + +L+
Sbjct: 221 AGLWDELVVTFVFERRYMWYFLQAYLPTFFSIFISWIAFSLGPQAITPRTMIGVNALLSM 280
Query: 157 -FQLGIETGSSLPNVSYIRSNDVWFFACTVFIFLSLAEFAFV 197
F G +LP VSYI++ DVW + F+FLSL E A V
Sbjct: 281 IFHFG-SIMKNLPRVSYIKAIDVWMLSSMTFVFLSLIELAIV 321
Score = 79 (32.9 bits), Expect = 4.1e-22, Sum P(2) = 4.1e-22
Identities = 16/89 (17%), Positives = 43/89 (48%)
Query: 9 DIGNLS-FQQEFKVQLLLQLHWKDPRLEYRHYAPHITEMVGERNFIQNIWTPHIYLTNER 67
+I ++S +F+++L + W DP L + H + ++ + +WTP+ N +
Sbjct: 62 EINSISEMTNDFELELFINEMWTDPSLRFPHLGACKANLTLDQQTLTKLWTPNTCFVNSK 121
Query: 68 DSLVLGLYRRDMLVSILPDGDMLFSTRSR 96
+ + +++ +++ +G + + R R
Sbjct: 122 FAEIYESSFQNVFLTLFDNGTVWVNYRVR 150
>FB|FBgn0033558 [details] [associations]
symbol:CG12344 species:7227 "Drosophila melanogaster"
[GO:0016934 "extracellular-glycine-gated chloride channel activity"
evidence=ISS] [GO:0016935 "glycine-gated chloride channel complex"
evidence=ISS] [GO:0045211 "postsynaptic membrane" evidence=IEA]
[GO:0006811 "ion transport" evidence=IEA] InterPro:IPR006028
InterPro:IPR006029 InterPro:IPR006201 InterPro:IPR006202
InterPro:IPR018000 Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252
PRINTS:PR00253 PROSITE:PS00236 EMBL:AE013599 GO:GO:0016021
GO:GO:0005886 GO:GO:0030054 GO:GO:0045211 GO:GO:0005230
Gene3D:2.70.170.10 PANTHER:PTHR18945 SUPFAM:SSF90112
SUPFAM:SSF63712 GeneTree:ENSGT00540000070314 EMBL:AY094938
RefSeq:NP_610619.2 UniGene:Dm.19411 SMR:Q8SWZ1 MINT:MINT-798498
EnsemblMetazoa:FBtr0088246 GeneID:36145 KEGG:dme:Dmel_CG12344
UCSC:CG12344-RA FlyBase:FBgn0033558 eggNOG:NOG293640
InParanoid:Q8SWZ1 OMA:LVTCMLT OrthoDB:EOG4TTF0J GenomeRNAi:36145
NextBio:797075 Uniprot:Q8SWZ1
Length = 449
Score = 216 (81.1 bits), Expect = 4.3e-22, Sum P(2) = 4.3e-22
Identities = 41/101 (40%), Positives = 63/101 (62%)
Query: 100 YSSLTLTFILNRQYGFYLMDFYAPSILLVCISWVSFWMAPDAVPGRTILGASTMLTFFQL 159
+S LT+ F RQ G +L+ +APS L+V +SW SFW+ DA+PGR L + MLT +
Sbjct: 233 FSRLTVYFRFERQIGHHLIQTFAPSSLVVMLSWFSFWLGLDAIPGRVTLLVTCMLTLVTM 292
Query: 160 GIETGSSLPNVSYIRSNDVWFFACTVFIFLSLAEFAFVNTI 200
TG+ +P V+Y+++ D+W C + +F +LAEF V +
Sbjct: 293 F--TGADIPPVAYVKALDLWMAGCMLSVFAALAEFVVVKVL 331
Score = 68 (29.0 bits), Expect = 4.3e-22, Sum P(2) = 4.3e-22
Identities = 20/97 (20%), Positives = 46/97 (47%)
Query: 7 LVDIGNLSFQQ-EFKVQLLLQLHWKDPRLE-----YRHYAPHITEMVGERNFIQNIWTPH 60
+VDI +++ + +F+V + + W + RLE + ++T ++ E +N W P
Sbjct: 66 VVDINSINVEDMDFRVDMFIHQRWLESRLEIPDDIFEEGDDYVT-LLPE--VFENFWQPD 122
Query: 61 IYLTNERDSLVLGLYRRDMLVSILPDGDMLFSTRSRA 97
Y N + + + L + V++ + + ++ R A
Sbjct: 123 PYFLNSKIAEIATLTHKFTSVTLYKNKTVRYAARMHA 159
>MGI|MGI:95616 [details] [associations]
symbol:Gabra4 "gamma-aminobutyric acid (GABA) A receptor,
subunit alpha 4" species:10090 "Mus musculus" [GO:0004890 "GABA-A
receptor activity" evidence=IEA] [GO:0005216 "ion channel activity"
evidence=IEA] [GO:0005230 "extracellular ligand-gated ion channel
activity" evidence=IEA] [GO:0005254 "chloride channel activity"
evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0006810 "transport" evidence=IEA] [GO:0006811 "ion transport"
evidence=IEA] [GO:0006821 "chloride transport" evidence=IEA]
[GO:0007214 "gamma-aminobutyric acid signaling pathway"
evidence=IEA] [GO:0007417 "central nervous system development"
evidence=IMP] [GO:0016020 "membrane" evidence=IEA] [GO:0016021
"integral to membrane" evidence=IEA] [GO:0030054 "cell junction"
evidence=IEA] [GO:0034707 "chloride channel complex" evidence=IEA]
[GO:0045202 "synapse" evidence=IEA] [GO:0045211 "postsynaptic
membrane" evidence=IEA] [GO:2001023 "regulation of response to
drug" evidence=IMP] InterPro:IPR001390 InterPro:IPR005434
InterPro:IPR006028 InterPro:IPR006029 InterPro:IPR006201
InterPro:IPR006202 InterPro:IPR018000 Pfam:PF02931 Pfam:PF02932
PRINTS:PR00252 PRINTS:PR00253 PRINTS:PR01079 PRINTS:PR01617
PROSITE:PS00236 MGI:MGI:95616 GO:GO:0005886 GO:GO:0030054
GO:GO:0045211 GO:GO:0005230 GO:GO:0004890 Gene3D:2.70.170.10
PANTHER:PTHR18945 SUPFAM:SSF90112 SUPFAM:SSF63712
TIGRFAMs:TIGR00860 GO:GO:0007214 GO:GO:0007417 GO:GO:0034707
GO:GO:0005254 CTD:2557 KO:K05175 eggNOG:NOG238757
GeneTree:ENSGT00550000074441 HOGENOM:HOG000231337
HOVERGEN:HBG051707 OMA:THANLNM OrthoDB:EOG4MPHQ4 GO:GO:2001023
EMBL:AK013727 IPI:IPI00109065 RefSeq:NP_034381.1 UniGene:Mm.248731
ProteinModelPortal:Q9D6F4 SMR:Q9D6F4 STRING:Q9D6F4
PhosphoSite:Q9D6F4 PRIDE:Q9D6F4 Ensembl:ENSMUST00000031121
GeneID:14397 KEGG:mmu:14397 InParanoid:Q9D6F4 BindingDB:Q9D6F4
ChEMBL:CHEMBL4182 NextBio:285935 Bgee:Q9D6F4 Genevestigator:Q9D6F4
Uniprot:Q9D6F4
Length = 552
Score = 214 (80.4 bits), Expect = 4.6e-22, Sum P(2) = 4.6e-22
Identities = 44/100 (44%), Positives = 62/100 (62%)
Query: 100 YSSLTLTFILNRQYGFYLMDFYAPSILLVCISWVSFWMAPDAVPGRTILGASTMLTFFQL 159
Y +T+ F L R+ G++++ Y P I+ V +S VSFW+ ++VP RT+ G +T+LT L
Sbjct: 243 YIVMTVYFHLRRKMGYFMIQTYIPCIMTVILSQVSFWINKESVPARTVFGITTVLTMTTL 302
Query: 160 GIETGSSLPNVSYIRSNDVWFFA-CTVFIFLSLAEFAFVN 198
I SLP VSY + D WF A C F+F +L EFA VN
Sbjct: 303 SISARHSLPKVSYATAMD-WFIAVCFAFVFSALIEFAAVN 341
Score = 74 (31.1 bits), Expect = 4.6e-22, Sum P(2) = 4.6e-22
Identities = 19/80 (23%), Positives = 39/80 (48%)
Query: 16 QQEFKVQLLLQLHWKDPRLEYRHYAPHITEMVGERNF-IQNIWTPHIYLTNERDSLVLGL 74
+ E+ + + + W D RL+Y P E++ N + +WTP + N + S+ +
Sbjct: 90 EMEYTMDVFFRQTWIDKRLKYD--GP--IEILRLNNMMVTKVWTPDTFFRNGKKSVSHNM 145
Query: 75 YRRDMLVSILPDGDMLFSTR 94
+ L I+ +G +L++ R
Sbjct: 146 TAPNKLFRIMRNGTILYTMR 165
>RGD|621670 [details] [associations]
symbol:Gabra4 "gamma-aminobutyric acid (GABA) A receptor, alpha
4" species:10116 "Rattus norvegicus" [GO:0004890 "GABA-A receptor
activity" evidence=IEA;TAS] [GO:0005230 "extracellular ligand-gated
ion channel activity" evidence=IEA] [GO:0005254 "chloride channel
activity" evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0006821 "chloride transport" evidence=IEA] [GO:0007214
"gamma-aminobutyric acid signaling pathway" evidence=IEA]
[GO:0007417 "central nervous system development" evidence=IEA;ISO]
[GO:0016021 "integral to membrane" evidence=IEA] [GO:0030054 "cell
junction" evidence=IEA] [GO:0034707 "chloride channel complex"
evidence=IEA] [GO:0045211 "postsynaptic membrane" evidence=IEA]
[GO:2001023 "regulation of response to drug" evidence=IEA;ISO]
InterPro:IPR001390 InterPro:IPR005434 InterPro:IPR006028
InterPro:IPR006029 InterPro:IPR006201 InterPro:IPR006202
InterPro:IPR018000 Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252
PRINTS:PR00253 PRINTS:PR01079 PRINTS:PR01617 PROSITE:PS00236
RGD:621670 GO:GO:0005886 GO:GO:0030054 GO:GO:0045211 GO:GO:0005230
GO:GO:0004890 Gene3D:2.70.170.10 PANTHER:PTHR18945 SUPFAM:SSF90112
SUPFAM:SSF63712 TIGRFAMs:TIGR00860 GO:GO:0007214 GO:GO:0034707
GO:GO:0005254 RefSeq:NP_542154.3 UniGene:Rn.81205 GeneID:140675
KEGG:rno:140675 CTD:2557 KO:K05175 eggNOG:NOG238757
HOVERGEN:HBG051707 EMBL:L08493 EMBL:S55933 IPI:IPI00200808
PIR:S17551 ProteinModelPortal:P28471 SMR:P28471 STRING:P28471
PhosphoSite:P28471 PRIDE:P28471 UCSC:RGD:621670 BindingDB:P28471
ChEMBL:CHEMBL292 NextBio:620671 Genevestigator:P28471
Uniprot:P28471
Length = 552
Score = 214 (80.4 bits), Expect = 4.6e-22, Sum P(2) = 4.6e-22
Identities = 44/100 (44%), Positives = 62/100 (62%)
Query: 100 YSSLTLTFILNRQYGFYLMDFYAPSILLVCISWVSFWMAPDAVPGRTILGASTMLTFFQL 159
Y +T+ F L R+ G++++ Y P I+ V +S VSFW+ ++VP RT+ G +T+LT L
Sbjct: 243 YIVMTVYFHLRRKMGYFMIQTYIPCIMTVILSQVSFWINKESVPARTVFGITTVLTMTTL 302
Query: 160 GIETGSSLPNVSYIRSNDVWFFA-CTVFIFLSLAEFAFVN 198
I SLP VSY + D WF A C F+F +L EFA VN
Sbjct: 303 SISARHSLPKVSYATAMD-WFIAVCFAFVFSALIEFAAVN 341
Score = 74 (31.1 bits), Expect = 4.6e-22, Sum P(2) = 4.6e-22
Identities = 19/80 (23%), Positives = 39/80 (48%)
Query: 16 QQEFKVQLLLQLHWKDPRLEYRHYAPHITEMVGERNF-IQNIWTPHIYLTNERDSLVLGL 74
+ E+ + + + W D RL+Y P E++ N + +WTP + N + S+ +
Sbjct: 90 EMEYTMDVFFRQTWIDKRLKYD--GP--IEILRLNNMMVTKVWTPDTFFRNGKKSVSHNM 145
Query: 75 YRRDMLVSILPDGDMLFSTR 94
+ L I+ +G +L++ R
Sbjct: 146 TAPNKLFRIMRNGTILYTMR 165
>UNIPROTKB|P28471 [details] [associations]
symbol:Gabra4 "Gamma-aminobutyric acid receptor subunit
alpha-4" species:10116 "Rattus norvegicus" [GO:0005230
"extracellular ligand-gated ion channel activity" evidence=IEA]
[GO:0007214 "gamma-aminobutyric acid signaling pathway"
evidence=IEA] [GO:0030054 "cell junction" evidence=IEA]
InterPro:IPR001390 InterPro:IPR005434 InterPro:IPR006028
InterPro:IPR006029 InterPro:IPR006201 InterPro:IPR006202
InterPro:IPR018000 Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252
PRINTS:PR00253 PRINTS:PR01079 PRINTS:PR01617 PROSITE:PS00236
RGD:621670 GO:GO:0005886 GO:GO:0030054 GO:GO:0045211 GO:GO:0005230
GO:GO:0004890 Gene3D:2.70.170.10 PANTHER:PTHR18945 SUPFAM:SSF90112
SUPFAM:SSF63712 TIGRFAMs:TIGR00860 GO:GO:0007214 GO:GO:0034707
GO:GO:0005254 RefSeq:NP_542154.3 UniGene:Rn.81205 GeneID:140675
KEGG:rno:140675 CTD:2557 KO:K05175 eggNOG:NOG238757
HOVERGEN:HBG051707 EMBL:L08493 EMBL:S55933 IPI:IPI00200808
PIR:S17551 ProteinModelPortal:P28471 SMR:P28471 STRING:P28471
PhosphoSite:P28471 PRIDE:P28471 UCSC:RGD:621670 BindingDB:P28471
ChEMBL:CHEMBL292 NextBio:620671 Genevestigator:P28471
Uniprot:P28471
Length = 552
Score = 214 (80.4 bits), Expect = 4.6e-22, Sum P(2) = 4.6e-22
Identities = 44/100 (44%), Positives = 62/100 (62%)
Query: 100 YSSLTLTFILNRQYGFYLMDFYAPSILLVCISWVSFWMAPDAVPGRTILGASTMLTFFQL 159
Y +T+ F L R+ G++++ Y P I+ V +S VSFW+ ++VP RT+ G +T+LT L
Sbjct: 243 YIVMTVYFHLRRKMGYFMIQTYIPCIMTVILSQVSFWINKESVPARTVFGITTVLTMTTL 302
Query: 160 GIETGSSLPNVSYIRSNDVWFFA-CTVFIFLSLAEFAFVN 198
I SLP VSY + D WF A C F+F +L EFA VN
Sbjct: 303 SISARHSLPKVSYATAMD-WFIAVCFAFVFSALIEFAAVN 341
Score = 74 (31.1 bits), Expect = 4.6e-22, Sum P(2) = 4.6e-22
Identities = 19/80 (23%), Positives = 39/80 (48%)
Query: 16 QQEFKVQLLLQLHWKDPRLEYRHYAPHITEMVGERNF-IQNIWTPHIYLTNERDSLVLGL 74
+ E+ + + + W D RL+Y P E++ N + +WTP + N + S+ +
Sbjct: 90 EMEYTMDVFFRQTWIDKRLKYD--GP--IEILRLNNMMVTKVWTPDTFFRNGKKSVSHNM 145
Query: 75 YRRDMLVSILPDGDMLFSTR 94
+ L I+ +G +L++ R
Sbjct: 146 TAPNKLFRIMRNGTILYTMR 165
>UNIPROTKB|P48169 [details] [associations]
symbol:GABRA4 "Gamma-aminobutyric acid receptor subunit
alpha-4" species:9606 "Homo sapiens" [GO:0004890 "GABA-A receptor
activity" evidence=IEA] [GO:0005230 "extracellular ligand-gated ion
channel activity" evidence=IEA] [GO:0007214 "gamma-aminobutyric
acid signaling pathway" evidence=IEA] [GO:0005254 "chloride channel
activity" evidence=IEA] [GO:0030054 "cell junction" evidence=IEA]
[GO:0034707 "chloride channel complex" evidence=IEA] [GO:0007417
"central nervous system development" evidence=IEA] [GO:2001023
"regulation of response to drug" evidence=IEA] [GO:0045211
"postsynaptic membrane" evidence=IEA] [GO:0005887 "integral to
plasma membrane" evidence=TAS] [GO:0006810 "transport"
evidence=TAS] [GO:0008503 "benzodiazepine receptor activity"
evidence=TAS] [GO:0005886 "plasma membrane" evidence=TAS]
[GO:0007268 "synaptic transmission" evidence=TAS] [GO:0034220 "ion
transmembrane transport" evidence=TAS] [GO:0055085 "transmembrane
transport" evidence=TAS] Reactome:REACT_13685 Reactome:REACT_15518
InterPro:IPR001390 InterPro:IPR005434 InterPro:IPR006028
InterPro:IPR006029 InterPro:IPR006201 InterPro:IPR006202
InterPro:IPR018000 Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252
PRINTS:PR00253 PRINTS:PR01079 PRINTS:PR01617 PROSITE:PS00236
GO:GO:0005887 GO:GO:0030054 GO:GO:0045211 GO:GO:0005230
GO:GO:0004890 Gene3D:2.70.170.10 PANTHER:PTHR18945 SUPFAM:SSF90112
SUPFAM:SSF63712 TIGRFAMs:TIGR00860 GO:GO:0034220 GO:GO:0007214
GO:GO:0007417 GO:GO:0034707 GO:GO:0005254 DrugBank:DB00186
EMBL:CH471069 DrugBank:DB00683 DrugBank:DB01544 DrugBank:DB00404
CTD:2557 KO:K05175 eggNOG:NOG238757 HOGENOM:HOG000231337
HOVERGEN:HBG051707 DrugBank:DB00189 DrugBank:DB00690
DrugBank:DB00371 GO:GO:0008503 OMA:THANLNM OrthoDB:EOG4MPHQ4
GO:GO:2001023 EMBL:U30461 EMBL:AK090780 EMBL:AC107383 EMBL:BC035055
EMBL:U20166 IPI:IPI00008225 PIR:G01928 RefSeq:NP_000800.2
RefSeq:NP_001191195.1 RefSeq:NP_001191196.1 UniGene:Hs.248112
ProteinModelPortal:P48169 SMR:P48169 IntAct:P48169 STRING:P48169
PhosphoSite:P48169 DMDM:206729865 PRIDE:P48169 DNASU:2557
Ensembl:ENST00000264318 GeneID:2557 KEGG:hsa:2557 UCSC:uc003gxg.3
GeneCards:GC04M046836 HGNC:HGNC:4078 MIM:137141 neXtProt:NX_P48169
PharmGKB:PA28492 InParanoid:P48169 PhylomeDB:P48169
BindingDB:P48169 ChEMBL:CHEMBL2472 GenomeRNAi:2557 NextBio:10099
ArrayExpress:P48169 Bgee:P48169 CleanEx:HS_GABRA4
Genevestigator:P48169 GermOnline:ENSG00000109158 Uniprot:P48169
Length = 554
Score = 214 (80.4 bits), Expect = 4.6e-22, Sum P(2) = 4.6e-22
Identities = 44/100 (44%), Positives = 62/100 (62%)
Query: 100 YSSLTLTFILNRQYGFYLMDFYAPSILLVCISWVSFWMAPDAVPGRTILGASTMLTFFQL 159
Y +T+ F L R+ G++++ Y P I+ V +S VSFW+ ++VP RT+ G +T+LT L
Sbjct: 243 YIVMTVYFHLRRKMGYFMIQTYIPCIMTVILSQVSFWINKESVPARTVFGITTVLTMTTL 302
Query: 160 GIETGSSLPNVSYIRSNDVWFFA-CTVFIFLSLAEFAFVN 198
I SLP VSY + D WF A C F+F +L EFA VN
Sbjct: 303 SISARHSLPKVSYATAMD-WFIAVCFAFVFSALIEFAAVN 341
Score = 74 (31.1 bits), Expect = 4.6e-22, Sum P(2) = 4.6e-22
Identities = 19/80 (23%), Positives = 39/80 (48%)
Query: 16 QQEFKVQLLLQLHWKDPRLEYRHYAPHITEMVGERNF-IQNIWTPHIYLTNERDSLVLGL 74
+ E+ + + + W D RL+Y P E++ N + +WTP + N + S+ +
Sbjct: 90 EMEYTMDVFFRQTWIDKRLKYD--GP--IEILRLNNMMVTKVWTPDTFFRNGKKSVSHNM 145
Query: 75 YRRDMLVSILPDGDMLFSTR 94
+ L I+ +G +L++ R
Sbjct: 146 TAPNKLFRIMRNGTILYTMR 165
>UNIPROTKB|I3LIV9 [details] [associations]
symbol:GABRA4 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:2001023 "regulation of response to drug" evidence=IEA]
[GO:0007417 "central nervous system development" evidence=IEA]
[GO:0045211 "postsynaptic membrane" evidence=IEA] [GO:0030054 "cell
junction" evidence=IEA] [GO:0016021 "integral to membrane"
evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0007214 "gamma-aminobutyric acid signaling pathway"
evidence=IEA] [GO:0006821 "chloride transport" evidence=IEA]
[GO:0005230 "extracellular ligand-gated ion channel activity"
evidence=IEA] [GO:0004890 "GABA-A receptor activity" evidence=IEA]
InterPro:IPR001390 InterPro:IPR005434 InterPro:IPR006028
InterPro:IPR006029 InterPro:IPR006201 InterPro:IPR006202
InterPro:IPR018000 Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252
PRINTS:PR00253 PRINTS:PR01079 PRINTS:PR01617 PROSITE:PS00236
GO:GO:0016021 GO:GO:0005886 GO:GO:0030054 GO:GO:0045211
GO:GO:0005230 GO:GO:0004890 Gene3D:2.70.170.10 PANTHER:PTHR18945
SUPFAM:SSF90112 SUPFAM:SSF63712 TIGRFAMs:TIGR00860 GO:GO:0007214
GO:GO:0007417 GO:GO:0006821 KO:K05175 GeneTree:ENSGT00550000074441
GO:GO:2001023 EMBL:CU467563 RefSeq:XP_003356954.1
Ensembl:ENSSSCT00000031430 GeneID:100622712 KEGG:ssc:100622712
OMA:KEPAIAM Uniprot:I3LIV9
Length = 554
Score = 214 (80.4 bits), Expect = 4.6e-22, Sum P(2) = 4.6e-22
Identities = 44/100 (44%), Positives = 62/100 (62%)
Query: 100 YSSLTLTFILNRQYGFYLMDFYAPSILLVCISWVSFWMAPDAVPGRTILGASTMLTFFQL 159
Y +T+ F L R+ G++++ Y P I+ V +S VSFW+ ++VP RT+ G +T+LT L
Sbjct: 243 YIVMTVYFHLRRKMGYFMIQTYIPCIMTVILSQVSFWINKESVPARTVFGITTVLTMTTL 302
Query: 160 GIETGSSLPNVSYIRSNDVWFFA-CTVFIFLSLAEFAFVN 198
I SLP VSY + D WF A C F+F +L EFA VN
Sbjct: 303 SISARHSLPKVSYATAMD-WFIAVCFAFVFSALIEFAAVN 341
Score = 74 (31.1 bits), Expect = 4.6e-22, Sum P(2) = 4.6e-22
Identities = 19/80 (23%), Positives = 39/80 (48%)
Query: 16 QQEFKVQLLLQLHWKDPRLEYRHYAPHITEMVGERNF-IQNIWTPHIYLTNERDSLVLGL 74
+ E+ + + + W D RL+Y P E++ N + +WTP + N + S+ +
Sbjct: 90 EMEYTMDVFFRQTWIDKRLKYD--GP--IEILRLNNMMVTKVWTPDTFFRNGKKSVSHNM 145
Query: 75 YRRDMLVSILPDGDMLFSTR 94
+ L I+ +G +L++ R
Sbjct: 146 TAPNKLFRIMRNGTILYTMR 165
>UNIPROTKB|P20237 [details] [associations]
symbol:GABRA4 "Gamma-aminobutyric acid receptor subunit
alpha-4" species:9913 "Bos taurus" [GO:0004890 "GABA-A receptor
activity" evidence=IEA] [GO:0045211 "postsynaptic membrane"
evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:2001023 "regulation of response to drug" evidence=IEA]
[GO:0007417 "central nervous system development" evidence=IEA]
[GO:0034707 "chloride channel complex" evidence=IEA] [GO:0030054
"cell junction" evidence=IEA] [GO:0005254 "chloride channel
activity" evidence=IEA] [GO:0007214 "gamma-aminobutyric acid
signaling pathway" evidence=IEA] [GO:0005230 "extracellular
ligand-gated ion channel activity" evidence=IEA] InterPro:IPR001390
InterPro:IPR005434 InterPro:IPR006028 InterPro:IPR006029
InterPro:IPR006201 InterPro:IPR006202 InterPro:IPR018000
Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252 PRINTS:PR00253
PRINTS:PR01079 PRINTS:PR01617 PROSITE:PS00236 GO:GO:0005886
GO:GO:0030054 GO:GO:0045211 GO:GO:0005230 GO:GO:0004890
Gene3D:2.70.170.10 PANTHER:PTHR18945 SUPFAM:SSF90112
SUPFAM:SSF63712 TIGRFAMs:TIGR00860 GO:GO:0007214 GO:GO:0007417
GO:GO:0034707 GO:GO:0005254 CTD:2557 KO:K05175 eggNOG:NOG238757
GeneTree:ENSGT00550000074441 HOGENOM:HOG000231337
HOVERGEN:HBG051707 EMBL:X61456 EMBL:BC123424 IPI:IPI00689982
PIR:S06838 RefSeq:NP_776968.1 UniGene:Bt.171
ProteinModelPortal:P20237 SMR:P20237 PRIDE:P20237
Ensembl:ENSBTAT00000022141 GeneID:282238 KEGG:bta:282238
InParanoid:P20237 OMA:THANLNM OrthoDB:EOG4MPHQ4 BindingDB:P20237
ChEMBL:CHEMBL3140 NextBio:20806057 GO:GO:2001023 Uniprot:P20237
Length = 555
Score = 214 (80.4 bits), Expect = 4.7e-22, Sum P(2) = 4.7e-22
Identities = 44/100 (44%), Positives = 62/100 (62%)
Query: 100 YSSLTLTFILNRQYGFYLMDFYAPSILLVCISWVSFWMAPDAVPGRTILGASTMLTFFQL 159
Y +T+ F L R+ G++++ Y P I+ V +S VSFW+ ++VP RT+ G +T+LT L
Sbjct: 243 YIVMTVYFHLRRKMGYFMIQTYIPCIMTVILSQVSFWINKESVPARTVFGITTVLTMTTL 302
Query: 160 GIETGSSLPNVSYIRSNDVWFFA-CTVFIFLSLAEFAFVN 198
I SLP VSY + D WF A C F+F +L EFA VN
Sbjct: 303 SISARHSLPKVSYATAMD-WFIAVCFAFVFSALIEFAAVN 341
Score = 74 (31.1 bits), Expect = 4.7e-22, Sum P(2) = 4.7e-22
Identities = 19/80 (23%), Positives = 39/80 (48%)
Query: 16 QQEFKVQLLLQLHWKDPRLEYRHYAPHITEMVGERNF-IQNIWTPHIYLTNERDSLVLGL 74
+ E+ + + + W D RL+Y P E++ N + +WTP + N + S+ +
Sbjct: 90 EMEYTMDVFFRQTWIDKRLKYD--GP--IEILRLNNMMVTKVWTPDTFFRNGKKSVSHNM 145
Query: 75 YRRDMLVSILPDGDMLFSTR 94
+ L I+ +G +L++ R
Sbjct: 146 TAPNKLFRIMRNGTILYTMR 165
>UNIPROTKB|F1MCS2 [details] [associations]
symbol:GABRA3 "Gamma-aminobutyric acid receptor subunit
alpha-3" species:9913 "Bos taurus" [GO:0045211 "postsynaptic
membrane" evidence=IEA] [GO:0030054 "cell junction" evidence=IEA]
[GO:0016021 "integral to membrane" evidence=IEA] [GO:0005886
"plasma membrane" evidence=IEA] [GO:0007214 "gamma-aminobutyric
acid signaling pathway" evidence=IEA] [GO:0006821 "chloride
transport" evidence=IEA] [GO:0005230 "extracellular ligand-gated
ion channel activity" evidence=IEA] [GO:0004890 "GABA-A receptor
activity" evidence=IEA] InterPro:IPR001390 InterPro:IPR005433
InterPro:IPR006028 InterPro:IPR006029 InterPro:IPR006201
InterPro:IPR006202 InterPro:IPR018000 Pfam:PF02931 Pfam:PF02932
PRINTS:PR00252 PRINTS:PR00253 PRINTS:PR01079 PRINTS:PR01616
PROSITE:PS00236 GO:GO:0016021 GO:GO:0005886 GO:GO:0030054
GO:GO:0045211 GO:GO:0005230 GO:GO:0004890 Gene3D:2.70.170.10
PANTHER:PTHR18945 SUPFAM:SSF90112 SUPFAM:SSF63712
TIGRFAMs:TIGR00860 GO:GO:0007214 GO:GO:0006821
GeneTree:ENSGT00550000074441 IPI:IPI00704308 UniGene:Bt.175
OMA:ASPKTTY EMBL:DAAA02068172 EMBL:DAAA02068173 EMBL:DAAA02068174
Ensembl:ENSBTAT00000008798 Uniprot:F1MCS2
Length = 492
Score = 214 (80.4 bits), Expect = 5.6e-22, Sum P(2) = 5.6e-22
Identities = 45/106 (42%), Positives = 64/106 (60%)
Query: 94 RSRAYMYSSLTLTFILNRQYGFYLMDFYAPSILLVCISWVSFWMAPDAVPGRTILGASTM 153
RS Y +T F L R+ G++++ Y P I+ V +S VSFW+ ++VP RT+ G +T+
Sbjct: 256 RSSTGEYVVMTTHFHLKRKIGYFVIQTYLPCIMTVILSQVSFWLNRESVPARTVFGVTTV 315
Query: 154 LTFFQLGIETGSSLPNVSYIRSNDVWFFA-CTVFIFLSLAEFAFVN 198
LT L I +SLP V+Y + D WF A C F+F +L EFA VN
Sbjct: 316 LTMTTLSISARNSLPKVAYATAMD-WFIAVCYAFVFSALIEFATVN 360
Score = 71 (30.1 bits), Expect = 5.6e-22, Sum P(2) = 5.6e-22
Identities = 17/78 (21%), Positives = 40/78 (51%)
Query: 18 EFKVQLLLQLHWKDPRLEYRHYAPHITEMVGERNFIQN-IWTPHIYLTNERDSLVLGLYR 76
E+ + + + W D RL++ P +++ N + + IWTP + N + S+ +
Sbjct: 111 EYTIDVFFRQTWHDERLKFD--GP--MKILPLNNLLASKIWTPDTFFHNGKKSVAHNMTT 166
Query: 77 RDMLVSILPDGDMLFSTR 94
+ L+ ++ +G +L++ R
Sbjct: 167 PNKLLRLVDNGTLLYTMR 184
>UNIPROTKB|P10064 [details] [associations]
symbol:GABRA3 "Gamma-aminobutyric acid receptor subunit
alpha-3" species:9913 "Bos taurus" [GO:0045211 "postsynaptic
membrane" evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0034707 "chloride channel complex" evidence=IEA] [GO:0030054
"cell junction" evidence=IEA] [GO:0005254 "chloride channel
activity" evidence=IEA] [GO:0007214 "gamma-aminobutyric acid
signaling pathway" evidence=IEA] [GO:0005230 "extracellular
ligand-gated ion channel activity" evidence=IEA] [GO:0004890
"GABA-A receptor activity" evidence=IEA] InterPro:IPR001390
InterPro:IPR005433 InterPro:IPR006028 InterPro:IPR006029
InterPro:IPR006201 InterPro:IPR006202 InterPro:IPR018000
Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252 PRINTS:PR00253
PRINTS:PR01079 PRINTS:PR01616 PROSITE:PS00236 GO:GO:0005886
GO:GO:0030054 GO:GO:0045211 GO:GO:0005230 GO:GO:0004890
Gene3D:2.70.170.10 PANTHER:PTHR18945 SUPFAM:SSF90112
SUPFAM:SSF63712 TIGRFAMs:TIGR00860 GO:GO:0007214 GO:GO:0034707
GO:GO:0005254 KO:K05175 eggNOG:NOG238757 HOGENOM:HOG000231337
HOVERGEN:HBG051707 EMBL:X12362 IPI:IPI00704308 PIR:S12511
RefSeq:NP_776967.1 UniGene:Bt.175 ProteinModelPortal:P10064
GeneID:282237 KEGG:bta:282237 CTD:2556 InParanoid:P10064
OrthoDB:EOG4X0MSC BindingDB:P10064 ChEMBL:CHEMBL3628
NextBio:20806056 Uniprot:P10064
Length = 492
Score = 214 (80.4 bits), Expect = 5.6e-22, Sum P(2) = 5.6e-22
Identities = 45/106 (42%), Positives = 64/106 (60%)
Query: 94 RSRAYMYSSLTLTFILNRQYGFYLMDFYAPSILLVCISWVSFWMAPDAVPGRTILGASTM 153
RS Y +T F L R+ G++++ Y P I+ V +S VSFW+ ++VP RT+ G +T+
Sbjct: 256 RSSTGEYVVMTTHFHLKRKIGYFVIQTYLPCIMTVILSQVSFWLNRESVPARTVFGVTTV 315
Query: 154 LTFFQLGIETGSSLPNVSYIRSNDVWFFA-CTVFIFLSLAEFAFVN 198
LT L I +SLP V+Y + D WF A C F+F +L EFA VN
Sbjct: 316 LTMTTLSISARNSLPKVAYATAMD-WFMAVCYAFVFSALIEFATVN 360
Score = 71 (30.1 bits), Expect = 5.6e-22, Sum P(2) = 5.6e-22
Identities = 17/78 (21%), Positives = 40/78 (51%)
Query: 18 EFKVQLLLQLHWKDPRLEYRHYAPHITEMVGERNFIQN-IWTPHIYLTNERDSLVLGLYR 76
E+ + + + W D RL++ P +++ N + + IWTP + N + S+ +
Sbjct: 111 EYTIDVFFRQTWHDERLKFD--GP--MKILPLNNLLASKIWTPDTFFHNGKKSVAHNMTT 166
Query: 77 RDMLVSILPDGDMLFSTR 94
+ L+ ++ +G +L++ R
Sbjct: 167 PNKLLRLVDNGTLLYTMR 184
>UNIPROTKB|E2QVJ7 [details] [associations]
symbol:GABRA3 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0045211 "postsynaptic membrane" evidence=IEA]
[GO:0030054 "cell junction" evidence=IEA] [GO:0016021 "integral to
membrane" evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0007214 "gamma-aminobutyric acid signaling pathway"
evidence=IEA] [GO:0006821 "chloride transport" evidence=IEA]
[GO:0005230 "extracellular ligand-gated ion channel activity"
evidence=IEA] [GO:0004890 "GABA-A receptor activity" evidence=IEA]
InterPro:IPR001390 InterPro:IPR005433 InterPro:IPR006028
InterPro:IPR006029 InterPro:IPR006201 InterPro:IPR006202
InterPro:IPR018000 Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252
PRINTS:PR00253 PRINTS:PR01079 PRINTS:PR01616 PROSITE:PS00236
GO:GO:0016021 GO:GO:0005886 GO:GO:0030054 GO:GO:0045211
GO:GO:0005230 GO:GO:0004890 Gene3D:2.70.170.10 PANTHER:PTHR18945
SUPFAM:SSF90112 SUPFAM:SSF63712 TIGRFAMs:TIGR00860 GO:GO:0007214
GO:GO:0006821 KO:K05175 GeneTree:ENSGT00550000074441 CTD:2556
OMA:ASPKTTY EMBL:AAEX03027059 EMBL:AAEX03027060 RefSeq:XP_549343.1
Ensembl:ENSCAFT00000030424 GeneID:492223 KEGG:cfa:492223
NextBio:20864840 Uniprot:E2QVJ7
Length = 492
Score = 214 (80.4 bits), Expect = 5.6e-22, Sum P(2) = 5.6e-22
Identities = 45/106 (42%), Positives = 64/106 (60%)
Query: 94 RSRAYMYSSLTLTFILNRQYGFYLMDFYAPSILLVCISWVSFWMAPDAVPGRTILGASTM 153
RS Y +T F L R+ G++++ Y P I+ V +S VSFW+ ++VP RT+ G +T+
Sbjct: 256 RSSTGEYVVMTTHFHLKRKIGYFVIQTYLPCIMTVILSQVSFWLNRESVPARTVFGVTTV 315
Query: 154 LTFFQLGIETGSSLPNVSYIRSNDVWFFA-CTVFIFLSLAEFAFVN 198
LT L I +SLP V+Y + D WF A C F+F +L EFA VN
Sbjct: 316 LTMTTLSISARNSLPKVAYATAMD-WFIAVCYAFVFSALIEFATVN 360
Score = 71 (30.1 bits), Expect = 5.6e-22, Sum P(2) = 5.6e-22
Identities = 17/78 (21%), Positives = 40/78 (51%)
Query: 18 EFKVQLLLQLHWKDPRLEYRHYAPHITEMVGERNFIQN-IWTPHIYLTNERDSLVLGLYR 76
E+ + + + W D RL++ P +++ N + + IWTP + N + S+ +
Sbjct: 111 EYTIDVFFRQTWHDERLKFD--GP--MKILPLNNLLASKIWTPDTFFHNGKKSVAHNMTT 166
Query: 77 RDMLVSILPDGDMLFSTR 94
+ L+ ++ +G +L++ R
Sbjct: 167 PNKLLRLVDNGTLLYTMR 184
>UNIPROTKB|P34903 [details] [associations]
symbol:GABRA3 "Gamma-aminobutyric acid receptor subunit
alpha-3" species:9606 "Homo sapiens" [GO:0004890 "GABA-A receptor
activity" evidence=IEA] [GO:0005230 "extracellular ligand-gated ion
channel activity" evidence=IEA] [GO:0007214 "gamma-aminobutyric
acid signaling pathway" evidence=IEA] [GO:0005254 "chloride channel
activity" evidence=IEA] [GO:0030054 "cell junction" evidence=IEA]
[GO:0034707 "chloride channel complex" evidence=IEA] [GO:0045211
"postsynaptic membrane" evidence=IEA] [GO:0005887 "integral to
plasma membrane" evidence=TAS] [GO:0006810 "transport"
evidence=TAS] [GO:0008503 "benzodiazepine receptor activity"
evidence=TAS] [GO:0005886 "plasma membrane" evidence=TAS]
[GO:0007268 "synaptic transmission" evidence=TAS] [GO:0034220 "ion
transmembrane transport" evidence=TAS] [GO:0055085 "transmembrane
transport" evidence=TAS] Reactome:REACT_13685 Reactome:REACT_15518
InterPro:IPR001390 InterPro:IPR005433 InterPro:IPR006028
InterPro:IPR006029 InterPro:IPR006201 InterPro:IPR006202
InterPro:IPR018000 Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252
PRINTS:PR00253 PRINTS:PR01079 PRINTS:PR01616 PROSITE:PS00236
GO:GO:0005887 GO:GO:0030054 GO:GO:0045211 GO:GO:0005230
GO:GO:0004890 Gene3D:2.70.170.10 PANTHER:PTHR18945 SUPFAM:SSF90112
SUPFAM:SSF63712 TIGRFAMs:TIGR00860 GO:GO:0034220 GO:GO:0007214
GO:GO:0034707 GO:GO:0005254 DrugBank:DB00186 Orphanet:79102
DrugBank:DB00829 DrugBank:DB00683 DrugBank:DB01544 DrugBank:DB00404
KO:K05175 eggNOG:NOG238757 HOGENOM:HOG000231337 HOVERGEN:HBG051707
DrugBank:DB00189 DrugBank:DB00690 DrugBank:DB00371 GO:GO:0008503
CTD:2556 OrthoDB:EOG4X0MSC EMBL:S62908 EMBL:AF166361 EMBL:AF165901
EMBL:AF165902 EMBL:AF165903 EMBL:AF165904 EMBL:AF165905
EMBL:AF165906 EMBL:AF166359 EMBL:AF166360 EMBL:BC028629
IPI:IPI00002897 PIR:I77911 RefSeq:NP_000799.1 UniGene:Hs.123024
ProteinModelPortal:P34903 SMR:P34903 IntAct:P34903
MINT:MINT-7242442 STRING:P34903 PhosphoSite:P34903 DMDM:462149
PRIDE:P34903 DNASU:2556 Ensembl:ENST00000370311
Ensembl:ENST00000370314 Ensembl:ENST00000535043 GeneID:2556
KEGG:hsa:2556 UCSC:uc010ntk.1 GeneCards:GC0XM151334 HGNC:HGNC:4077
HPA:HPA000839 MIM:305660 neXtProt:NX_P34903 PharmGKB:PA28491
InParanoid:P34903 OMA:ASPKTTY PhylomeDB:P34903 BindingDB:P34903
ChEMBL:CHEMBL3026 GenomeRNAi:2556 NextBio:10095 Bgee:P34903
CleanEx:HS_GABRA3 Genevestigator:P34903 GermOnline:ENSG00000011677
Uniprot:P34903
Length = 492
Score = 214 (80.4 bits), Expect = 5.6e-22, Sum P(2) = 5.6e-22
Identities = 45/106 (42%), Positives = 64/106 (60%)
Query: 94 RSRAYMYSSLTLTFILNRQYGFYLMDFYAPSILLVCISWVSFWMAPDAVPGRTILGASTM 153
RS Y +T F L R+ G++++ Y P I+ V +S VSFW+ ++VP RT+ G +T+
Sbjct: 256 RSSTGEYVVMTTHFHLKRKIGYFVIQTYLPCIMTVILSQVSFWLNRESVPARTVFGVTTV 315
Query: 154 LTFFQLGIETGSSLPNVSYIRSNDVWFFA-CTVFIFLSLAEFAFVN 198
LT L I +SLP V+Y + D WF A C F+F +L EFA VN
Sbjct: 316 LTMTTLSISARNSLPKVAYATAMD-WFIAVCYAFVFSALIEFATVN 360
Score = 71 (30.1 bits), Expect = 5.6e-22, Sum P(2) = 5.6e-22
Identities = 17/78 (21%), Positives = 40/78 (51%)
Query: 18 EFKVQLLLQLHWKDPRLEYRHYAPHITEMVGERNFIQN-IWTPHIYLTNERDSLVLGLYR 76
E+ + + + W D RL++ P +++ N + + IWTP + N + S+ +
Sbjct: 111 EYTIDVFFRQTWHDERLKFD--GP--MKILPLNNLLASKIWTPDTFFHNGKKSVAHNMTT 166
Query: 77 RDMLVSILPDGDMLFSTR 94
+ L+ ++ +G +L++ R
Sbjct: 167 PNKLLRLVDNGTLLYTMR 184
>WB|WBGene00022106 [details] [associations]
symbol:lgc-46 species:6239 "Caenorhabditis elegans"
[GO:0006811 "ion transport" evidence=IEA] [GO:0016021 "integral to
membrane" evidence=IEA] [GO:0016020 "membrane" evidence=IEA]
[GO:0005230 "extracellular ligand-gated ion channel activity"
evidence=IEA] [GO:0006810 "transport" evidence=IEA] [GO:0045211
"postsynaptic membrane" evidence=IEA] [GO:0040010 "positive
regulation of growth rate" evidence=IMP] [GO:0002119 "nematode
larval development" evidence=IMP] [GO:0040011 "locomotion"
evidence=IMP] [GO:0000003 "reproduction" evidence=IMP] [GO:0009792
"embryo development ending in birth or egg hatching" evidence=IMP]
[GO:0006915 "apoptotic process" evidence=IMP] InterPro:IPR006028
InterPro:IPR006029 InterPro:IPR006201 InterPro:IPR006202
InterPro:IPR018000 Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252
PRINTS:PR00253 PROSITE:PS00236 GO:GO:0016021 GO:GO:0005886
GO:GO:0009792 GO:GO:0040010 GO:GO:0006915 GO:GO:0002119
GO:GO:0030054 GO:GO:0045211 GO:GO:0005230 Gene3D:2.70.170.10
PANTHER:PTHR18945 SUPFAM:SSF90112 SUPFAM:SSF63712 GO:GO:0040011
GO:GO:0000003 EMBL:FO081503 GeneTree:ENSGT00540000070314
HOGENOM:HOG000016259 RefSeq:NP_497338.2 ProteinModelPortal:Q95Y52
SMR:Q95Y52 EnsemblMetazoa:Y71D11A.5 GeneID:175279
KEGG:cel:CELE_Y71D11A.5 UCSC:Y71D11A.5 CTD:175279
WormBase:Y71D11A.5 eggNOG:NOG317885 InParanoid:Q95Y52 OMA:YANGTVW
NextBio:887500 Uniprot:Q95Y52
Length = 508
Score = 226 (84.6 bits), Expect = 7.2e-22, Sum P(2) = 7.2e-22
Identities = 42/104 (40%), Positives = 66/104 (63%)
Query: 100 YSSLTLTFILNRQYGFYLMDFYAPSILLVCISWVSFWMAPDAVPGRTILGASTMLTF-FQ 158
+ LT++F R+ G+Y++ Y P+ L +CISW+SF + A+P RT+LG +++L FQ
Sbjct: 258 WHELTMSFEFKRRAGWYILQAYLPTYLTICISWISFALGSKAIPARTMLGVNSLLAMTFQ 317
Query: 159 LGIETGSSLPNVSYIRSNDVWFFACTVFIFLSLAEFAFVNTIWR 202
G +LP VSY+++ DVW +C F+F SL E A+V + R
Sbjct: 318 FG-NIIRNLPRVSYVKAIDVWMLSCMTFVFCSLLELAWVGYLSR 360
Score = 58 (25.5 bits), Expect = 7.2e-22, Sum P(2) = 7.2e-22
Identities = 11/50 (22%), Positives = 22/50 (44%)
Query: 18 EFKVQLLLQLHWKDPRLEYRHYAPHITEMVGERNFIQNIWTPHIYLTNER 67
+F++ + + W DP L Y P + ++ +WTP+ N +
Sbjct: 107 DFQLDIYIYETWYDPALNYAFMNPCKYNLSLNSVLLEKLWTPNSCFINSK 156
>WB|WBGene00001591 [details] [associations]
symbol:glc-1 species:6239 "Caenorhabditis elegans"
[GO:0006811 "ion transport" evidence=IEA] [GO:0016021 "integral to
membrane" evidence=IEA] [GO:0016020 "membrane" evidence=IEA]
[GO:0005230 "extracellular ligand-gated ion channel activity"
evidence=IEA] [GO:0006810 "transport" evidence=IEA] [GO:0045211
"postsynaptic membrane" evidence=IEA] [GO:0031987 "locomotion
involved in locomotory behavior" evidence=IGI;IMP]
InterPro:IPR006028 InterPro:IPR006029 InterPro:IPR006201
InterPro:IPR006202 InterPro:IPR018000 Pfam:PF02931 Pfam:PF02932
PRINTS:PR00252 PRINTS:PR00253 PROSITE:PS00236 GO:GO:0016021
GO:GO:0005886 GO:GO:0030054 GO:GO:0045211 GO:GO:0005230
Gene3D:2.70.170.10 PANTHER:PTHR18945 SUPFAM:SSF90112
SUPFAM:SSF63712 TIGRFAMs:TIGR00860 GO:GO:0031987
GeneTree:ENSGT00630000089685 KO:K05273 EMBL:Z92830 EMBL:U14524
PIR:S50864 PIR:T20754 RefSeq:NP_507090.1 UniGene:Cel.18023
ProteinModelPortal:G5EBR3 SMR:G5EBR3 EnsemblMetazoa:F11A5.10
GeneID:180086 KEGG:cel:CELE_F11A5.10 CTD:180086 WormBase:F11A5.10
OMA:DEINMEY ChEMBL:CHEMBL4410 NextBio:908030 Uniprot:G5EBR3
Length = 461
Score = 258 (95.9 bits), Expect = 1.1e-21, P = 1.1e-21
Identities = 59/141 (41%), Positives = 75/141 (53%)
Query: 62 YLTNERDSLVLGLYRRDMLVSI-LPDGDMLFSTR-SRAYMYSSLTLTFILNRQYGFYLMD 119
YL E L L + L S L + + T + +YS L T L R++ FYL+
Sbjct: 221 YLWKEHSPLQLKVGLSSSLPSFQLTNTSTTYCTSVTNTGIYSCLRTTIQLKREFSFYLLQ 280
Query: 120 FYAPSILLVCISWVSFWMAPDAVPGRTILGASTMLTFFQLGIETGSSLPNVSYIRSNDVW 179
Y PS +LV +SWVSFW A+P R LG +T+LT S LP VSYI++ DVW
Sbjct: 281 LYIPSCMLVIVSWVSFWFDRTAIPARVTLGVTTLLTMTAQSAGINSQLPPVSYIKAIDVW 340
Query: 180 FFACTVFIFLSLAEFAFVNTI 200
AC FIF +L EFA VN I
Sbjct: 341 IGACMTFIFCALLEFALVNHI 361
>UNIPROTKB|F1S2D3 [details] [associations]
symbol:GABRE "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0045211 "postsynaptic membrane" evidence=IEA]
[GO:0030054 "cell junction" evidence=IEA] [GO:0016021 "integral to
membrane" evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0005230 "extracellular ligand-gated ion channel activity"
evidence=IEA] [GO:0004890 "GABA-A receptor activity" evidence=IEA]
InterPro:IPR001390 InterPro:IPR006028 InterPro:IPR006029
InterPro:IPR006201 InterPro:IPR006202 InterPro:IPR018000
Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252 PRINTS:PR00253
PRINTS:PR01079 PROSITE:PS00236 GO:GO:0016021 GO:GO:0005886
GO:GO:0030054 GO:GO:0045211 GO:GO:0005230 GO:GO:0004890
Gene3D:2.70.170.10 PANTHER:PTHR18945 SUPFAM:SSF90112
SUPFAM:SSF63712 TIGRFAMs:TIGR00860 GeneTree:ENSGT00540000070314
OMA:LYTIRMT EMBL:FP074856 Ensembl:ENSSSCT00000013944 Uniprot:F1S2D3
Length = 506
Score = 207 (77.9 bits), Expect = 1.4e-21, Sum P(2) = 1.4e-21
Identities = 40/96 (41%), Positives = 58/96 (60%)
Query: 103 LTLTFILNRQYGFYLMDFYAPSILLVCISWVSFWMAPDAVPGRTILGASTMLTFFQLGIE 162
+TL F ++R++GF Y PS + ISW+SFW+ D+ P RT LG +++LT LG
Sbjct: 268 MTLFFNVSRRFGFVAFQNYVPSSVTTMISWISFWLKKDSAPARTSLGITSVLTMTTLGTF 327
Query: 163 TGSSLPNVSYIRSNDVWFFACTVFIFLSLAEFAFVN 198
+ + P VSYI + D + C VF F +L EFA +N
Sbjct: 328 SRKNFPRVSYITALDFYIAICFVFCFCALMEFAVLN 363
Score = 75 (31.5 bits), Expect = 1.4e-21, Sum P(2) = 1.4e-21
Identities = 19/86 (22%), Positives = 35/86 (40%)
Query: 10 IGNLSF-QQEFKVQLLLQLHWKDPRLEYRHYAPHITEMVGERNFIQNIWTPHIYLTNERD 68
+G +S E+ + + W D RL Y V N + +W P + N +
Sbjct: 107 LGPISILDMEYTIDITFYQTWYDERLRYNG---SFESFVLNGNLVSLLWVPDTFFRNSKR 163
Query: 69 SLVLGLYRRDMLVSILPDGDMLFSTR 94
+ + + +V I DG +L++ R
Sbjct: 164 TQEHSITMPNQMVRIYKDGKVLYTIR 189
>UNIPROTKB|E7ET93 [details] [associations]
symbol:GABRE "Gamma-aminobutyric acid receptor subunit
epsilon" species:9606 "Homo sapiens" [GO:0004890 "GABA-A receptor
activity" evidence=IEA] [GO:0005230 "extracellular ligand-gated ion
channel activity" evidence=IEA] [GO:0006821 "chloride transport"
evidence=IEA] [GO:0007214 "gamma-aminobutyric acid signaling
pathway" evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0016021 "integral to membrane" evidence=IEA] [GO:0030054 "cell
junction" evidence=IEA] [GO:0045211 "postsynaptic membrane"
evidence=IEA] InterPro:IPR005437 InterPro:IPR006028
InterPro:IPR006029 InterPro:IPR006201 InterPro:IPR006202
InterPro:IPR018000 Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252
PRINTS:PR00253 PRINTS:PR01620 PROSITE:PS00236 GO:GO:0016021
GO:GO:0005886 GO:GO:0030054 GO:GO:0045211 GO:GO:0005230
GO:GO:0004890 Gene3D:2.70.170.10 PANTHER:PTHR18945 SUPFAM:SSF90112
SUPFAM:SSF63712 TIGRFAMs:TIGR00860 GO:GO:0007214 GO:GO:0006821
HGNC:HGNC:4085 ChiTaRS:GABRE EMBL:AF274855 IPI:IPI00647456
ProteinModelPortal:E7ET93 SMR:E7ET93 Ensembl:ENST00000370325
ArrayExpress:E7ET93 Bgee:E7ET93 Uniprot:E7ET93
Length = 365
Score = 196 (74.1 bits), Expect = 2.5e-21, Sum P(2) = 2.5e-21
Identities = 37/96 (38%), Positives = 58/96 (60%)
Query: 103 LTLTFILNRQYGFYLMDFYAPSILLVCISWVSFWMAPDAVPGRTILGASTMLTFFQLGIE 162
+T+ F ++R++G+ Y PS + +SWVSFW+ ++ P RT LG +++LT LG
Sbjct: 267 MTIFFNVSRRFGYVAFQNYVPSSVTTMLSWVSFWIKTESAPARTSLGITSVLTMTTLGTF 326
Query: 163 TGSSLPNVSYIRSNDVWFFACTVFIFLSLAEFAFVN 198
+ + P VSYI + D + C VF F +L EFA +N
Sbjct: 327 SRKNFPRVSYITALDFYIAICFVFCFCALLEFAVLN 362
Score = 77 (32.2 bits), Expect = 2.5e-21, Sum P(2) = 2.5e-21
Identities = 20/86 (23%), Positives = 37/86 (43%)
Query: 10 IGNLSF-QQEFKVQLLLQLHWKDPRLEYRHYAPHITEMVGERNFIQNIWTPHIYLTNERD 68
+G LS E+ + ++ W D RL Y +V N + +W P + N +
Sbjct: 106 LGPLSILDMEYTIDIIFSQTWYDERLCYNDT---FESLVLNGNVVSQLWIPDTFFRNSKR 162
Query: 69 SLVLGLYRRDMLVSILPDGDMLFSTR 94
+ + + +V I DG +L++ R
Sbjct: 163 THEHEITMPNQMVRIYKDGKVLYTIR 188
>ZFIN|ZDB-GENE-091118-65 [details] [associations]
symbol:gabrg2 "gamma-aminobutyric acid (GABA) A
receptor, gamma 2" species:7955 "Danio rerio" [GO:0045211
"postsynaptic membrane" evidence=IEA] [GO:0005230 "extracellular
ligand-gated ion channel activity" evidence=IEA] [GO:0006811 "ion
transport" evidence=IEA] [GO:0006821 "chloride transport"
evidence=IEA] [GO:0016020 "membrane" evidence=IEA] [GO:0016021
"integral to membrane" evidence=IEA] [GO:0004890 "GABA-A receptor
activity" evidence=IEA] [GO:0006810 "transport" evidence=IEA]
[GO:0007214 "gamma-aminobutyric acid signaling pathway"
evidence=IEA] [GO:0045202 "synapse" evidence=IEA] [GO:0030054 "cell
junction" evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
InterPro:IPR005437 InterPro:IPR006028 InterPro:IPR006029
InterPro:IPR006201 InterPro:IPR006202 InterPro:IPR018000
Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252 PRINTS:PR00253
PRINTS:PR01620 PROSITE:PS00236 ZFIN:ZDB-GENE-091118-65
GO:GO:0016021 GO:GO:0005886 GO:GO:0030054 GO:GO:0045211
GO:GO:0005230 GO:GO:0004890 Gene3D:2.70.170.10 PANTHER:PTHR18945
SUPFAM:SSF90112 SUPFAM:SSF63712 TIGRFAMs:TIGR00860 GO:GO:0007214
GO:GO:0006821 GeneTree:ENSGT00540000070314 EMBL:CABZ01068454
EMBL:CABZ01068455 EMBL:CR847531 IPI:IPI00482925
Ensembl:ENSDART00000092821 ArrayExpress:F1RDP2 Bgee:F1RDP2
Uniprot:F1RDP2
Length = 469
Score = 215 (80.7 bits), Expect = 3.0e-21, Sum P(2) = 3.0e-21
Identities = 41/95 (43%), Positives = 60/95 (63%)
Query: 100 YSSLTLTFILNRQYGFYLMDFYAPSILLVCISWVSFWMAPDAVPGRTILGASTMLTFFQL 159
Y LT+ F L+R+ G++ + Y P L+V +SWVSFW+ DAVP RT LG +T+LT L
Sbjct: 259 YVVLTVFFDLSRRMGYFTIQTYIPCTLIVVLSWVSFWINKDAVPARTSLGITTVLTMTTL 318
Query: 160 GIETGSSLPNVSYIRSNDVWFFACTVFIFLSLAEF 194
SLP VSY+ + D++ C +F+F +L E+
Sbjct: 319 STIARKSLPKVSYVTAMDLFVSVCFIFVFAALIEY 353
Score = 62 (26.9 bits), Expect = 3.0e-21, Sum P(2) = 3.0e-21
Identities = 15/81 (18%), Positives = 34/81 (41%)
Query: 14 SFQQEFKVQLLLQLHWKDPRLEYRHYAPHITEMVGERNFIQNIWTPHIYLTNERDSLVLG 73
+ E+ + + W D RL++ + + N + IW P + N + +
Sbjct: 106 AINMEYTIDIFFAQTWYDRRLKFNS-TMKVLRL--NSNMVGKIWIPDTFFRNSKKADAHW 162
Query: 74 LYRRDMLVSILPDGDMLFSTR 94
+ + ++ I DG +L++ R
Sbjct: 163 ITTPNRMLRIWNDGRILYTLR 183
>UNIPROTKB|A8MWU7 [details] [associations]
symbol:GABRG2 "cDNA FLJ59748, highly similar to
Gamma-aminobutyric-acid receptor gamma-2 subunit" species:9606
"Homo sapiens" [GO:0004890 "GABA-A receptor activity" evidence=IEA]
[GO:0005230 "extracellular ligand-gated ion channel activity"
evidence=IEA] [GO:0006821 "chloride transport" evidence=IEA]
[GO:0007214 "gamma-aminobutyric acid signaling pathway"
evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0016021 "integral to membrane" evidence=IEA] [GO:0030054 "cell
junction" evidence=IEA] [GO:0045211 "postsynaptic membrane"
evidence=IEA] InterPro:IPR005437 InterPro:IPR006028
InterPro:IPR006029 InterPro:IPR006201 InterPro:IPR006202
InterPro:IPR018000 Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252
PRINTS:PR00253 PRINTS:PR01620 PROSITE:PS00236 GO:GO:0016021
GO:GO:0005886 GO:GO:0030054 GO:GO:0045211 GO:GO:0005230
GO:GO:0004890 Gene3D:2.70.170.10 PANTHER:PTHR18945 SUPFAM:SSF90112
SUPFAM:SSF63712 TIGRFAMs:TIGR00860 GO:GO:0007214 GO:GO:0006821
HOGENOM:HOG000231337 HOVERGEN:HBG051707 UniGene:Hs.7195
HGNC:HGNC:4087 EMBL:AC008611 EMBL:AC091926 EMBL:AC091984
EMBL:AK299640 IPI:IPI00982076 SMR:A8MWU7 STRING:A8MWU7
Ensembl:ENST00000393933 Uniprot:A8MWU7
Length = 372
Score = 209 (78.6 bits), Expect = 3.2e-21, Sum P(2) = 3.2e-21
Identities = 39/95 (41%), Positives = 60/95 (63%)
Query: 100 YSSLTLTFILNRQYGFYLMDFYAPSILLVCISWVSFWMAPDAVPGRTILGASTMLTFFQL 159
Y +++ F L+R+ G++ + Y P L+V +SWVSFW+ DAVP RT LG +T+LT L
Sbjct: 164 YVVMSVYFDLSRRMGYFTIQTYIPCTLIVVLSWVSFWINKDAVPARTSLGITTVLTMTTL 223
Query: 160 GIETGSSLPNVSYIRSNDVWFFACTVFIFLSLAEF 194
SLP VSY+ + D++ C +F+F +L E+
Sbjct: 224 STIARKSLPKVSYVTAMDLFVSVCFIFVFSALVEY 258
Score = 62 (26.9 bits), Expect = 3.2e-21, Sum P(2) = 3.2e-21
Identities = 16/81 (19%), Positives = 34/81 (41%)
Query: 14 SFQQEFKVQLLLQLHWKDPRLEYRHYAPHITEMVGERNFIQNIWTPHIYLTNERDSLVLG 73
+ E+ + + W D RL++ I + N + IW P + N + +
Sbjct: 11 AINMEYTIDIFFAQTWYDRRLKFNST---IKVLRLNSNMVGKIWIPDTFFRNSKKADAHW 67
Query: 74 LYRRDMLVSILPDGDMLFSTR 94
+ + ++ I DG +L++ R
Sbjct: 68 ITTPNRMLRIWNDGRVLYTLR 88
>UNIPROTKB|G3MYR4 [details] [associations]
symbol:GABRG2 "Gamma-aminobutyric acid receptor subunit
gamma-2" species:9913 "Bos taurus" [GO:0045211 "postsynaptic
membrane" evidence=IEA] [GO:0030054 "cell junction" evidence=IEA]
[GO:0016021 "integral to membrane" evidence=IEA] [GO:0005886
"plasma membrane" evidence=IEA] [GO:0007214 "gamma-aminobutyric
acid signaling pathway" evidence=IEA] [GO:0006821 "chloride
transport" evidence=IEA] [GO:0005230 "extracellular ligand-gated
ion channel activity" evidence=IEA] [GO:0004890 "GABA-A receptor
activity" evidence=IEA] InterPro:IPR005437 InterPro:IPR005439
InterPro:IPR006028 InterPro:IPR006029 InterPro:IPR006201
InterPro:IPR006202 InterPro:IPR018000 Pfam:PF02931 Pfam:PF02932
PRINTS:PR00252 PRINTS:PR00253 PRINTS:PR01620 PRINTS:PR01622
PROSITE:PS00236 GO:GO:0016021 GO:GO:0005886 GO:GO:0030054
GO:GO:0045211 GO:GO:0005230 GO:GO:0004890 Gene3D:2.70.170.10
PANTHER:PTHR18945 SUPFAM:SSF90112 SUPFAM:SSF63712
TIGRFAMs:TIGR00860 GO:GO:0007214 GO:GO:0006821
GeneTree:ENSGT00540000070314 EMBL:DAAA02020916 EMBL:DAAA02020917
Ensembl:ENSBTAT00000066231 Uniprot:G3MYR4
Length = 467
Score = 213 (80.0 bits), Expect = 4.9e-21, Sum P(2) = 4.9e-21
Identities = 40/95 (42%), Positives = 60/95 (63%)
Query: 100 YSSLTLTFILNRQYGFYLMDFYAPSILLVCISWVSFWMAPDAVPGRTILGASTMLTFFQL 159
Y +T+ F L+R+ G++ + Y P L+V +SWVSFW+ DAVP RT LG +T+LT L
Sbjct: 259 YVVMTVYFDLSRRMGYFTIQTYIPCTLIVVLSWVSFWINKDAVPARTSLGITTVLTMTTL 318
Query: 160 GIETGSSLPNVSYIRSNDVWFFACTVFIFLSLAEF 194
SLP VSY+ + D++ C +F+F +L E+
Sbjct: 319 STIARKSLPKVSYVTAMDLFVSVCFIFVFSALVEY 353
Score = 62 (26.9 bits), Expect = 4.9e-21, Sum P(2) = 4.9e-21
Identities = 16/81 (19%), Positives = 34/81 (41%)
Query: 14 SFQQEFKVQLLLQLHWKDPRLEYRHYAPHITEMVGERNFIQNIWTPHIYLTNERDSLVLG 73
+ E+ + + W D RL++ I + N + IW P + N + +
Sbjct: 106 AINMEYTIDIFFAQTWYDRRLKFNST---IKVLRLNSNMVGKIWIPDTFFRNSKKADAHW 162
Query: 74 LYRRDMLVSILPDGDMLFSTR 94
+ + ++ I DG +L++ R
Sbjct: 163 ITTPNRMLRIWNDGRVLYTLR 183
>UNIPROTKB|F1RR72 [details] [associations]
symbol:GABRG2 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0030534 "adult behavior" evidence=IEA] [GO:0030424
"axon" evidence=IEA] [GO:0009791 "post-embryonic development"
evidence=IEA] [GO:0007268 "synaptic transmission" evidence=IEA]
[GO:0007214 "gamma-aminobutyric acid signaling pathway"
evidence=IEA] [GO:0004890 "GABA-A receptor activity" evidence=IEA]
[GO:0045211 "postsynaptic membrane" evidence=IEA] [GO:0030054 "cell
junction" evidence=IEA] [GO:0016021 "integral to membrane"
evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0006821 "chloride transport" evidence=IEA] [GO:0005230
"extracellular ligand-gated ion channel activity" evidence=IEA]
InterPro:IPR005437 InterPro:IPR005439 InterPro:IPR006028
InterPro:IPR006029 InterPro:IPR006201 InterPro:IPR006202
InterPro:IPR018000 Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252
PRINTS:PR00253 PRINTS:PR01620 PRINTS:PR01622 PROSITE:PS00236
GO:GO:0016021 GO:GO:0005886 GO:GO:0007268 GO:GO:0030054
GO:GO:0045211 GO:GO:0005230 GO:GO:0004890 Gene3D:2.70.170.10
PANTHER:PTHR18945 SUPFAM:SSF90112 SUPFAM:SSF63712
TIGRFAMs:TIGR00860 GO:GO:0030424 GO:GO:0007214 GO:GO:0009791
GO:GO:0030534 GO:GO:0006821 GeneTree:ENSGT00540000070314 KO:K05186
CTD:2566 OMA:GFTSQKS EMBL:CU929724 RefSeq:XP_003359873.1
UniGene:Ssc.93419 Ensembl:ENSSSCT00000018537 GeneID:100516405
KEGG:ssc:100516405 Uniprot:F1RR72
Length = 467
Score = 213 (80.0 bits), Expect = 4.9e-21, Sum P(2) = 4.9e-21
Identities = 40/95 (42%), Positives = 60/95 (63%)
Query: 100 YSSLTLTFILNRQYGFYLMDFYAPSILLVCISWVSFWMAPDAVPGRTILGASTMLTFFQL 159
Y +T+ F L+R+ G++ + Y P L+V +SWVSFW+ DAVP RT LG +T+LT L
Sbjct: 259 YVVMTVYFDLSRRMGYFTIQTYIPCTLIVVLSWVSFWINKDAVPARTSLGITTVLTMTTL 318
Query: 160 GIETGSSLPNVSYIRSNDVWFFACTVFIFLSLAEF 194
SLP VSY+ + D++ C +F+F +L E+
Sbjct: 319 STIARKSLPKVSYVTAMDLFVSVCFIFVFSALVEY 353
Score = 62 (26.9 bits), Expect = 4.9e-21, Sum P(2) = 4.9e-21
Identities = 16/81 (19%), Positives = 34/81 (41%)
Query: 14 SFQQEFKVQLLLQLHWKDPRLEYRHYAPHITEMVGERNFIQNIWTPHIYLTNERDSLVLG 73
+ E+ + + W D RL++ I + N + IW P + N + +
Sbjct: 106 AINMEYTIDIFFAQTWYDRRLKFNST---IKVLRLNSNMVGKIWIPDTFFRNSKKADAHW 162
Query: 74 LYRRDMLVSILPDGDMLFSTR 94
+ + ++ I DG +L++ R
Sbjct: 163 ITTPNRMLRIWNDGRVLYTLR 183
>UNIPROTKB|F1MIG7 [details] [associations]
symbol:GABRG2 "Gamma-aminobutyric acid receptor subunit
gamma-2" species:9913 "Bos taurus" [GO:0030534 "adult behavior"
evidence=IEA] [GO:0030424 "axon" evidence=IEA] [GO:0009791
"post-embryonic development" evidence=IEA] [GO:0007268 "synaptic
transmission" evidence=IEA] [GO:0007214 "gamma-aminobutyric acid
signaling pathway" evidence=IEA] [GO:0004890 "GABA-A receptor
activity" evidence=IEA] [GO:0045211 "postsynaptic membrane"
evidence=IEA] [GO:0030054 "cell junction" evidence=IEA] [GO:0016021
"integral to membrane" evidence=IEA] [GO:0005886 "plasma membrane"
evidence=IEA] [GO:0006821 "chloride transport" evidence=IEA]
[GO:0005230 "extracellular ligand-gated ion channel activity"
evidence=IEA] InterPro:IPR005437 InterPro:IPR005439
InterPro:IPR006028 InterPro:IPR006029 InterPro:IPR006201
InterPro:IPR006202 InterPro:IPR018000 Pfam:PF02931 Pfam:PF02932
PRINTS:PR00252 PRINTS:PR00253 PRINTS:PR01620 PRINTS:PR01622
PROSITE:PS00236 GO:GO:0016021 GO:GO:0005886 GO:GO:0007268
GO:GO:0030054 GO:GO:0045211 GO:GO:0005230 GO:GO:0004890
Gene3D:2.70.170.10 PANTHER:PTHR18945 SUPFAM:SSF90112
SUPFAM:SSF63712 TIGRFAMs:TIGR00860 GO:GO:0030424 GO:GO:0007214
GO:GO:0009791 GO:GO:0030534 GO:GO:0006821
GeneTree:ENSGT00540000070314 IPI:IPI00690304 UniGene:Bt.408
OMA:GFTSQKS EMBL:DAAA02020916 EMBL:DAAA02020917
Ensembl:ENSBTAT00000013543 ArrayExpress:F1MIG7 Uniprot:F1MIG7
Length = 475
Score = 213 (80.0 bits), Expect = 5.3e-21, Sum P(2) = 5.3e-21
Identities = 40/95 (42%), Positives = 60/95 (63%)
Query: 100 YSSLTLTFILNRQYGFYLMDFYAPSILLVCISWVSFWMAPDAVPGRTILGASTMLTFFQL 159
Y +T+ F L+R+ G++ + Y P L+V +SWVSFW+ DAVP RT LG +T+LT L
Sbjct: 259 YVVMTVYFDLSRRMGYFTIQTYIPCTLIVVLSWVSFWINKDAVPARTSLGITTVLTMTTL 318
Query: 160 GIETGSSLPNVSYIRSNDVWFFACTVFIFLSLAEF 194
SLP VSY+ + D++ C +F+F +L E+
Sbjct: 319 STIARKSLPKVSYVTAMDLFVSVCFIFVFSALVEY 353
Score = 62 (26.9 bits), Expect = 5.3e-21, Sum P(2) = 5.3e-21
Identities = 16/81 (19%), Positives = 34/81 (41%)
Query: 14 SFQQEFKVQLLLQLHWKDPRLEYRHYAPHITEMVGERNFIQNIWTPHIYLTNERDSLVLG 73
+ E+ + + W D RL++ I + N + IW P + N + +
Sbjct: 106 AINMEYTIDIFFAQTWYDRRLKFNST---IKVLRLNSNMVGKIWIPDTFFRNSKKADAHW 162
Query: 74 LYRRDMLVSILPDGDMLFSTR 94
+ + ++ I DG +L++ R
Sbjct: 163 ITTPNRMLRIWNDGRVLYTLR 183
>WB|WBGene00003386 [details] [associations]
symbol:mod-1 species:6239 "Caenorhabditis elegans"
[GO:0005230 "extracellular ligand-gated ion channel activity"
evidence=IEA;IDA] [GO:0006811 "ion transport" evidence=IEA]
[GO:0016021 "integral to membrane" evidence=IEA] [GO:0016020
"membrane" evidence=IEA] [GO:0006810 "transport" evidence=IEA]
[GO:0045211 "postsynaptic membrane" evidence=IEA] [GO:0006821
"chloride transport" evidence=IDA] [GO:0007210 "serotonin receptor
signaling pathway" evidence=IMP;IDA] [GO:0042595 "behavioral
response to starvation" evidence=IMP] [GO:0005887 "integral to
plasma membrane" evidence=ISS] [GO:0043025 "neuronal cell body"
evidence=IDA] [GO:0005254 "chloride channel activity" evidence=IDA]
[GO:0004993 "serotonin receptor activity" evidence=IDA]
InterPro:IPR006028 InterPro:IPR006029 InterPro:IPR006201
InterPro:IPR006202 InterPro:IPR018000 Pfam:PF02931 Pfam:PF02932
PRINTS:PR00252 PRINTS:PR00253 PROSITE:PS00236 GO:GO:0005887
GO:GO:0004993 GO:GO:0030054 GO:GO:0045211 GO:GO:0005230
Gene3D:2.70.170.10 PANTHER:PTHR18945 SUPFAM:SSF90112
SUPFAM:SSF63712 TIGRFAMs:TIGR00860 GO:GO:0043025 GO:GO:0005254
GO:GO:0042595 GeneTree:ENSGT00540000070314 EMBL:FO081551
HOGENOM:HOG000016259 UniGene:Cel.8029 GeneID:179269
KEGG:cel:CELE_K06C4.6 CTD:179269 UCSC:K06C4.6a NextBio:904636
EMBL:AF303088 RefSeq:NP_741580.1 ProteinModelPortal:Q9GQ00
SMR:Q9GQ00 TCDB:1.A.9.6.1 EnsemblMetazoa:K06C4.6a.1
EnsemblMetazoa:K06C4.6a.2 WormBase:K06C4.6a InParanoid:Q9GQ00
OMA:NITMETR ArrayExpress:Q9GQ00 Uniprot:Q9GQ00
Length = 489
Score = 252 (93.8 bits), Expect = 6.4e-21, P = 6.4e-21
Identities = 53/126 (42%), Positives = 76/126 (60%)
Query: 84 LPDGDML-FSTRSRAYMYSS-----LTLTFILNRQYGFYLMDFYAPSILLVCISWVSFWM 137
LPD DM+ +ST+ +Y + L +TF R+YGFY++ Y P+ L + +SWVSF M
Sbjct: 204 LPDFDMVHYSTKKETLLYPNGYWDQLQVTFTFKRRYGFYIIQAYVPTYLTIIVSWVSFCM 263
Query: 138 APDAVPGRTILGASTMLTF-FQLGIETGSSLPNVSYIRSNDVWFFACTVFIFLSLAEFAF 196
P A+P RT +G S++L FQ G +LP VSY+++ DVW C F+F ++ E AF
Sbjct: 264 EPKALPARTTVGISSLLALTFQFG-NILKNLPRVSYVKAMDVWMLGCISFVFGTMVELAF 322
Query: 197 VNTIWR 202
V I R
Sbjct: 323 VCYISR 328
>UNIPROTKB|P22300 [details] [associations]
symbol:GABRG2 "Gamma-aminobutyric acid receptor subunit
gamma-2" species:9913 "Bos taurus" [GO:0045211 "postsynaptic
membrane" evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0034707 "chloride channel complex" evidence=IEA] [GO:0030054
"cell junction" evidence=IEA] [GO:0005254 "chloride channel
activity" evidence=IEA] [GO:0007214 "gamma-aminobutyric acid
signaling pathway" evidence=IEA] [GO:0005230 "extracellular
ligand-gated ion channel activity" evidence=IEA] [GO:0004890
"GABA-A receptor activity" evidence=IEA] InterPro:IPR005437
InterPro:IPR005439 InterPro:IPR006028 InterPro:IPR006029
InterPro:IPR006201 InterPro:IPR006202 InterPro:IPR018000
Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252 PRINTS:PR00253
PRINTS:PR01620 PRINTS:PR01622 PROSITE:PS00236 GO:GO:0005886
GO:GO:0030054 GO:GO:0045211 GO:GO:0005230 GO:GO:0004890
Gene3D:2.70.170.10 PANTHER:PTHR18945 SUPFAM:SSF90112
SUPFAM:SSF63712 TIGRFAMs:TIGR00860 GO:GO:0007214 GO:GO:0034707
GO:GO:0005254 eggNOG:NOG238757 HOGENOM:HOG000231337
HOVERGEN:HBG051707 KO:K05186 OrthoDB:EOG44BB25 EMBL:M55563
IPI:IPI00687809 IPI:IPI00690304 PIR:B39272 RefSeq:NP_776970.1
UniGene:Bt.408 ProteinModelPortal:P22300 SMR:P22300 STRING:P22300
PRIDE:P22300 GeneID:282240 KEGG:bta:282240 CTD:2566
InParanoid:P22300 BindingDB:P22300 ChEMBL:CHEMBL5138
NextBio:20806059 Uniprot:P22300
Length = 475
Score = 213 (80.0 bits), Expect = 6.8e-21, Sum P(2) = 6.8e-21
Identities = 40/95 (42%), Positives = 60/95 (63%)
Query: 100 YSSLTLTFILNRQYGFYLMDFYAPSILLVCISWVSFWMAPDAVPGRTILGASTMLTFFQL 159
Y +T+ F L+R+ G++ + Y P L+V +SWVSFW+ DAVP RT LG +T+LT L
Sbjct: 259 YVVMTVYFDLSRRMGYFTIQTYIPCTLIVVLSWVSFWINKDAVPARTSLGITTVLTMTTL 318
Query: 160 GIETGSSLPNVSYIRSNDVWFFACTVFIFLSLAEF 194
SLP VSY+ + D++ C +F+F +L E+
Sbjct: 319 STIARKSLPKVSYVTAMDLFVSVCFIFVFSALVEY 353
Score = 61 (26.5 bits), Expect = 6.8e-21, Sum P(2) = 6.8e-21
Identities = 16/81 (19%), Positives = 34/81 (41%)
Query: 14 SFQQEFKVQLLLQLHWKDPRLEYRHYAPHITEMVGERNFIQNIWTPHIYLTNERDSLVLG 73
+ E+ + + W D RL++ I + N + IW P + N + +
Sbjct: 106 AINMEYTIDIFFGQTWYDRRLKFNST---IKVLRLNSNMVGKIWIPDTFFRNSKKADAHW 162
Query: 74 LYRRDMLVSILPDGDMLFSTR 94
+ + ++ I DG +L++ R
Sbjct: 163 ITTPNRMLRIWNDGRVLYTLR 183
>FB|FBgn0003011 [details] [associations]
symbol:ort "ora transientless" species:7227 "Drosophila
melanogaster" [GO:0019182 "histamine-gated chloride channel
activity" evidence=ISS;NAS] [GO:0019183 "histamine-gated chloride
channel complex" evidence=NAS] [GO:0007268 "synaptic transmission"
evidence=IMP] [GO:0045472 "response to ether" evidence=IMP]
[GO:0009636 "response to toxic substance" evidence=IMP] [GO:0030534
"adult behavior" evidence=IMP] [GO:0016021 "integral to membrane"
evidence=IEA] [GO:0006811 "ion transport" evidence=IEA] [GO:0005230
"extracellular ligand-gated ion channel activity" evidence=IEA]
[GO:0045211 "postsynaptic membrane" evidence=IEA] [GO:0043052
"thermotaxis" evidence=IMP] InterPro:IPR006028 InterPro:IPR006029
InterPro:IPR006201 InterPro:IPR006202 InterPro:IPR018000
Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252 PRINTS:PR00253
PROSITE:PS00236 GO:GO:0016021 GO:GO:0005886 GO:GO:0007268
GO:GO:0009636 GO:GO:0030054 GO:GO:0045211 GO:GO:0005230
Gene3D:2.70.170.10 PANTHER:PTHR18945 SUPFAM:SSF90112
SUPFAM:SSF63712 TIGRFAMs:TIGR00860 GO:GO:0030534 GO:GO:0043052
GO:GO:0045472 eggNOG:NOG295166 InterPro:IPR015680
PANTHER:PTHR18945:SF26 ChiTaRS:oc EMBL:AY672639
ProteinModelPortal:A1KYB3 SMR:A1KYB3 STRING:A1KYB3 PRIDE:A1KYB3
FlyBase:FBgn0003011 InParanoid:A1KYB3 OrthoDB:EOG4F4QSD Bgee:A1KYB3
GO:GO:0019182 Uniprot:A1KYB3
Length = 485
Score = 225 (84.3 bits), Expect = 8.1e-21, Sum P(2) = 8.1e-21
Identities = 38/101 (37%), Positives = 66/101 (65%)
Query: 100 YSSLTLTFILNRQYGFYLMDFYAPSILLVCISWVSFWMAPDAVPGRTILGASTMLTFFQL 159
++ L + F L R+ +Y+ + Y P+ ++V +SWVSFW+ P+A P R LG +++LT
Sbjct: 223 FTCLEVVFTLKRRLVYYVFNTYIPTCMIVIMSWVSFWIKPEAAPARVTLGVTSLLTLSTQ 282
Query: 160 GIETGSSLPNVSYIRSNDVWFFACTVFIFLSLAEFAFVNTI 200
++ SSLP VSY+++ D + CTVF+F++L E+ +N +
Sbjct: 283 HAKSQSSLPPVSYLKAVDAFMSVCTVFVFMALMEYCLINIV 323
Score = 48 (22.0 bits), Expect = 8.1e-21, Sum P(2) = 8.1e-21
Identities = 10/39 (25%), Positives = 19/39 (48%)
Query: 29 WKDPRLEYRHYAPHITEMVGERNFIQNIWTPHIYLTNER 67
WKD RL ++ E ++++N+W P + N +
Sbjct: 84 WKDHRLRLPENMTQEYRLL-EVDWLKNMWRPDSFFKNAK 121
>UNIPROTKB|F1NID8 [details] [associations]
symbol:GABRG2 "Gamma-aminobutyric acid receptor subunit
gamma-2" species:9031 "Gallus gallus" [GO:0004890 "GABA-A receptor
activity" evidence=IEA] [GO:0005230 "extracellular ligand-gated ion
channel activity" evidence=IEA] [GO:0006821 "chloride transport"
evidence=IEA] [GO:0007214 "gamma-aminobutyric acid signaling
pathway" evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0016021 "integral to membrane" evidence=IEA] [GO:0030054 "cell
junction" evidence=IEA] [GO:0045211 "postsynaptic membrane"
evidence=IEA] InterPro:IPR005437 InterPro:IPR006028
InterPro:IPR006029 InterPro:IPR006201 InterPro:IPR006202
InterPro:IPR018000 Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252
PRINTS:PR00253 PRINTS:PR01620 PROSITE:PS00236 GO:GO:0016021
GO:GO:0005886 GO:GO:0030054 GO:GO:0045211 GO:GO:0005230
GO:GO:0004890 Gene3D:2.70.170.10 PANTHER:PTHR18945 SUPFAM:SSF90112
SUPFAM:SSF63712 TIGRFAMs:TIGR00860 GO:GO:0007214 GO:GO:0006821
GeneTree:ENSGT00540000070314 IPI:IPI00577501 EMBL:AADN02035879
Ensembl:ENSGALT00000002621 Uniprot:F1NID8
Length = 438
Score = 209 (78.6 bits), Expect = 9.6e-21, Sum P(2) = 9.6e-21
Identities = 39/95 (41%), Positives = 60/95 (63%)
Query: 100 YSSLTLTFILNRQYGFYLMDFYAPSILLVCISWVSFWMAPDAVPGRTILGASTMLTFFQL 159
Y +++ F L+R+ G++ + Y P L+V +SWVSFW+ DAVP RT LG +T+LT L
Sbjct: 222 YVVMSVYFNLSRRMGYFTIQTYIPCTLIVVLSWVSFWINKDAVPARTSLGITTVLTMTTL 281
Query: 160 GIETGSSLPNVSYIRSNDVWFFACTVFIFLSLAEF 194
SLP VSY+ + D++ C +F+F +L E+
Sbjct: 282 STIARKSLPKVSYVTAMDLFVSVCFIFVFSALVEY 316
Score = 62 (26.9 bits), Expect = 9.6e-21, Sum P(2) = 9.6e-21
Identities = 16/81 (19%), Positives = 34/81 (41%)
Query: 14 SFQQEFKVQLLLQLHWKDPRLEYRHYAPHITEMVGERNFIQNIWTPHIYLTNERDSLVLG 73
+ E+ + + W D RL++ I + N + IW P + N + +
Sbjct: 69 AINMEYTIDIFFAQTWYDRRLKFNST---IKVLRLNSNMVGKIWIPDTFFRNSKKADAHW 125
Query: 74 LYRRDMLVSILPDGDMLFSTR 94
+ + ++ I DG +L++ R
Sbjct: 126 ITTPNRMLRIWNDGRVLYTLR 146
>UNIPROTKB|F1NVG2 [details] [associations]
symbol:GABRG2 "Gamma-aminobutyric acid receptor subunit
gamma-2" species:9031 "Gallus gallus" [GO:0005230 "extracellular
ligand-gated ion channel activity" evidence=IEA] [GO:0006821
"chloride transport" evidence=IEA] [GO:0005886 "plasma membrane"
evidence=IEA] [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0030054 "cell junction" evidence=IEA] [GO:0045211 "postsynaptic
membrane" evidence=IEA] [GO:0004890 "GABA-A receptor activity"
evidence=IEA] [GO:0007214 "gamma-aminobutyric acid signaling
pathway" evidence=IEA] [GO:0007268 "synaptic transmission"
evidence=IEA] [GO:0009791 "post-embryonic development"
evidence=IEA] [GO:0030424 "axon" evidence=IEA] [GO:0030534 "adult
behavior" evidence=IEA] InterPro:IPR005437 InterPro:IPR006028
InterPro:IPR006029 InterPro:IPR006201 InterPro:IPR006202
InterPro:IPR018000 Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252
PRINTS:PR00253 PRINTS:PR01620 PROSITE:PS00236 GO:GO:0016021
GO:GO:0005886 GO:GO:0030054 GO:GO:0045211 GO:GO:0005230
GO:GO:0004890 Gene3D:2.70.170.10 PANTHER:PTHR18945 SUPFAM:SSF90112
SUPFAM:SSF63712 TIGRFAMs:TIGR00860 GO:GO:0030424 GO:GO:0007214
GO:GO:0006821 GeneTree:ENSGT00540000070314 OMA:GFTSQKS
EMBL:AADN02035879 IPI:IPI00820989 Ensembl:ENSGALT00000034794
Uniprot:F1NVG2
Length = 445
Score = 209 (78.6 bits), Expect = 1.1e-20, Sum P(2) = 1.1e-20
Identities = 39/95 (41%), Positives = 60/95 (63%)
Query: 100 YSSLTLTFILNRQYGFYLMDFYAPSILLVCISWVSFWMAPDAVPGRTILGASTMLTFFQL 159
Y +++ F L+R+ G++ + Y P L+V +SWVSFW+ DAVP RT LG +T+LT L
Sbjct: 237 YVVMSVYFNLSRRMGYFTIQTYIPCTLIVVLSWVSFWINKDAVPARTSLGITTVLTMTTL 296
Query: 160 GIETGSSLPNVSYIRSNDVWFFACTVFIFLSLAEF 194
SLP VSY+ + D++ C +F+F +L E+
Sbjct: 297 STIARKSLPKVSYVTAMDLFVSVCFIFVFSALVEY 331
Score = 62 (26.9 bits), Expect = 1.1e-20, Sum P(2) = 1.1e-20
Identities = 16/81 (19%), Positives = 34/81 (41%)
Query: 14 SFQQEFKVQLLLQLHWKDPRLEYRHYAPHITEMVGERNFIQNIWTPHIYLTNERDSLVLG 73
+ E+ + + W D RL++ I + N + IW P + N + +
Sbjct: 84 AINMEYTIDIFFAQTWYDRRLKFNST---IKVLRLNSNMVGKIWIPDTFFRNSKKADAHW 140
Query: 74 LYRRDMLVSILPDGDMLFSTR 94
+ + ++ I DG +L++ R
Sbjct: 141 ITTPNRMLRIWNDGRVLYTLR 161
>UNIPROTKB|F1M4V9 [details] [associations]
symbol:Gabrg2 "Gamma-aminobutyric acid receptor subunit
gamma-2" species:10116 "Rattus norvegicus" [GO:0004890 "GABA-A
receptor activity" evidence=IEA] [GO:0005230 "extracellular
ligand-gated ion channel activity" evidence=IEA] [GO:0005886
"plasma membrane" evidence=IEA] [GO:0006821 "chloride transport"
evidence=IEA] [GO:0007214 "gamma-aminobutyric acid signaling
pathway" evidence=IEA] [GO:0016021 "integral to membrane"
evidence=IEA] [GO:0030054 "cell junction" evidence=IEA] [GO:0045211
"postsynaptic membrane" evidence=IEA] InterPro:IPR005437
InterPro:IPR006028 InterPro:IPR006029 InterPro:IPR006201
InterPro:IPR006202 InterPro:IPR018000 Pfam:PF02931 Pfam:PF02932
PRINTS:PR00252 PRINTS:PR00253 PRINTS:PR01620 PROSITE:PS00236
RGD:61966 GO:GO:0016021 GO:GO:0005886 GO:GO:0030054 GO:GO:0045211
GO:GO:0005230 GO:GO:0004890 Gene3D:2.70.170.10 PANTHER:PTHR18945
SUPFAM:SSF90112 SUPFAM:SSF63712 TIGRFAMs:TIGR00860 GO:GO:0007214
GO:GO:0006821 IPI:IPI00950881 Ensembl:ENSRNOT00000065955
ArrayExpress:F1M4V9 Uniprot:F1M4V9
Length = 445
Score = 209 (78.6 bits), Expect = 1.1e-20, Sum P(2) = 1.1e-20
Identities = 39/95 (41%), Positives = 60/95 (63%)
Query: 100 YSSLTLTFILNRQYGFYLMDFYAPSILLVCISWVSFWMAPDAVPGRTILGASTMLTFFQL 159
Y +++ F L+R+ G++ + Y P L+V +SWVSFW+ DAVP RT LG +T+LT L
Sbjct: 237 YVVMSVYFDLSRRMGYFTIQTYIPCTLIVVLSWVSFWINKDAVPARTSLGITTVLTMTTL 296
Query: 160 GIETGSSLPNVSYIRSNDVWFFACTVFIFLSLAEF 194
SLP VSY+ + D++ C +F+F +L E+
Sbjct: 297 STIARKSLPKVSYVTAMDLFVSVCFIFVFSALVEY 331
Score = 62 (26.9 bits), Expect = 1.1e-20, Sum P(2) = 1.1e-20
Identities = 16/81 (19%), Positives = 34/81 (41%)
Query: 14 SFQQEFKVQLLLQLHWKDPRLEYRHYAPHITEMVGERNFIQNIWTPHIYLTNERDSLVLG 73
+ E+ + + W D RL++ I + N + IW P + N + +
Sbjct: 84 AINMEYTIDIFFAQTWYDRRLKFNST---IKVLRLNSNMVGKIWIPDTFFRNSKKADAHW 140
Query: 74 LYRRDMLVSILPDGDMLFSTR 94
+ + ++ I DG +L++ R
Sbjct: 141 ITTPNRMLRIWNDGRVLYTLR 161
>UNIPROTKB|E2RSQ0 [details] [associations]
symbol:GABRG2 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0030534 "adult behavior" evidence=IEA]
[GO:0030424 "axon" evidence=IEA] [GO:0009791 "post-embryonic
development" evidence=IEA] [GO:0007268 "synaptic transmission"
evidence=IEA] [GO:0007214 "gamma-aminobutyric acid signaling
pathway" evidence=IEA] [GO:0004890 "GABA-A receptor activity"
evidence=IEA] [GO:0045211 "postsynaptic membrane" evidence=IEA]
[GO:0030054 "cell junction" evidence=IEA] [GO:0016021 "integral to
membrane" evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0006821 "chloride transport" evidence=IEA] [GO:0005230
"extracellular ligand-gated ion channel activity" evidence=IEA]
InterPro:IPR005437 InterPro:IPR006028 InterPro:IPR006029
InterPro:IPR006201 InterPro:IPR006202 InterPro:IPR018000
Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252 PRINTS:PR00253
PRINTS:PR01620 PROSITE:PS00236 GO:GO:0016021 GO:GO:0005886
GO:GO:0007268 GO:GO:0030054 GO:GO:0045211 GO:GO:0005230
GO:GO:0004890 Gene3D:2.70.170.10 PANTHER:PTHR18945 SUPFAM:SSF90112
SUPFAM:SSF63712 TIGRFAMs:TIGR00860 GO:GO:0030424 GO:GO:0007214
GO:GO:0009791 GO:GO:0030534 GO:GO:0006821
GeneTree:ENSGT00540000070314 OMA:GFTSQKS EMBL:AAEX03003042
Ensembl:ENSCAFT00000027292 NextBio:20862353 Uniprot:E2RSQ0
Length = 453
Score = 209 (78.6 bits), Expect = 1.2e-20, Sum P(2) = 1.2e-20
Identities = 39/95 (41%), Positives = 60/95 (63%)
Query: 100 YSSLTLTFILNRQYGFYLMDFYAPSILLVCISWVSFWMAPDAVPGRTILGASTMLTFFQL 159
Y +++ F L+R+ G++ + Y P L+V +SWVSFW+ DAVP RT LG +T+LT L
Sbjct: 237 YVVMSVYFDLSRRMGYFTIQTYIPCTLIVVLSWVSFWINKDAVPARTSLGITTVLTMTTL 296
Query: 160 GIETGSSLPNVSYIRSNDVWFFACTVFIFLSLAEF 194
SLP VSY+ + D++ C +F+F +L E+
Sbjct: 297 STIARKSLPKVSYVTAMDLFVSVCFIFVFSALVEY 331
Score = 62 (26.9 bits), Expect = 1.2e-20, Sum P(2) = 1.2e-20
Identities = 16/81 (19%), Positives = 34/81 (41%)
Query: 14 SFQQEFKVQLLLQLHWKDPRLEYRHYAPHITEMVGERNFIQNIWTPHIYLTNERDSLVLG 73
+ E+ + + W D RL++ I + N + IW P + N + +
Sbjct: 84 AINMEYTIDIFFAQTWYDRRLKFNST---IKVLRLNSNMVGKIWIPDTFFRNSKKADAHW 140
Query: 74 LYRRDMLVSILPDGDMLFSTR 94
+ + ++ I DG +L++ R
Sbjct: 141 ITTPNRMLRIWNDGRVLYTLR 161
>RGD|61966 [details] [associations]
symbol:Gabrg2 "gamma-aminobutyric acid (GABA) A receptor, gamma 2"
species:10116 "Rattus norvegicus" [GO:0004890 "GABA-A receptor
activity" evidence=IEA;ISO;IDA;TAS] [GO:0005230 "extracellular
ligand-gated ion channel activity" evidence=IEA] [GO:0005237
"inhibitory extracellular ligand-gated ion channel activity"
evidence=TAS] [GO:0005254 "chloride channel activity" evidence=IDA]
[GO:0005737 "cytoplasm" evidence=IDA] [GO:0005886 "plasma membrane"
evidence=IEA] [GO:0006821 "chloride transport" evidence=IEA;TAS]
[GO:0007214 "gamma-aminobutyric acid signaling pathway"
evidence=IEA;ISO;TAS] [GO:0007268 "synaptic transmission"
evidence=IEA;ISO] [GO:0009791 "post-embryonic development"
evidence=IEA;ISO] [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0030054 "cell junction" evidence=IEA] [GO:0030424 "axon"
evidence=IEA;ISO] [GO:0030534 "adult behavior" evidence=IEA;ISO]
[GO:0032590 "dendrite membrane" evidence=IDA] [GO:0034707 "chloride
channel complex" evidence=IEA] [GO:0045211 "postsynaptic membrane"
evidence=IEA] [GO:0051932 "synaptic transmission, GABAergic"
evidence=IDA] [GO:0060077 "inhibitory synapse" evidence=IDA]
InterPro:IPR005437 InterPro:IPR005439 InterPro:IPR006028
InterPro:IPR006029 InterPro:IPR006201 InterPro:IPR006202
InterPro:IPR018000 Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252
PRINTS:PR00253 PRINTS:PR01620 PRINTS:PR01622 PROSITE:PS00236
RGD:61966 GO:GO:0005737 GO:GO:0030054 GO:GO:0045211 GO:GO:0004890
Gene3D:2.70.170.10 PANTHER:PTHR18945 SUPFAM:SSF90112 SUPFAM:SSF63712
TIGRFAMs:TIGR00860 GO:GO:0007214 GO:GO:0032590 GO:GO:0034707
GO:GO:0005254 PDB:2PR9 PDBsum:2PR9 GO:GO:0051932 eggNOG:NOG238757
HOGENOM:HOG000231337 HOVERGEN:HBG051707 GO:GO:0005237
GeneTree:ENSGT00540000070314 GO:GO:0060077 KO:K05186 CTD:2566
EMBL:L08497 IPI:IPI00192646 PIR:JQ0077 RefSeq:NP_899156.1
UniGene:Rn.230132 ProteinModelPortal:P18508 SMR:P18508
MINT:MINT-3371576 STRING:P18508 PRIDE:P18508
Ensembl:ENSRNOT00000004619 GeneID:29709 KEGG:rno:29709
UCSC:RGD:61966 BindingDB:P18508 ChEMBL:CHEMBL297
EvolutionaryTrace:P18508 NextBio:610135 ArrayExpress:P18508
Genevestigator:P18508 GermOnline:ENSRNOG00000003241 Uniprot:P18508
Length = 466
Score = 209 (78.6 bits), Expect = 1.3e-20, Sum P(2) = 1.3e-20
Identities = 39/95 (41%), Positives = 60/95 (63%)
Query: 100 YSSLTLTFILNRQYGFYLMDFYAPSILLVCISWVSFWMAPDAVPGRTILGASTMLTFFQL 159
Y +++ F L+R+ G++ + Y P L+V +SWVSFW+ DAVP RT LG +T+LT L
Sbjct: 258 YVVMSVYFDLSRRMGYFTIQTYIPCTLIVVLSWVSFWINKDAVPARTSLGITTVLTMTTL 317
Query: 160 GIETGSSLPNVSYIRSNDVWFFACTVFIFLSLAEF 194
SLP VSY+ + D++ C +F+F +L E+
Sbjct: 318 STIARKSLPKVSYVTAMDLFVSVCFIFVFSALVEY 352
Score = 62 (26.9 bits), Expect = 1.3e-20, Sum P(2) = 1.3e-20
Identities = 16/81 (19%), Positives = 34/81 (41%)
Query: 14 SFQQEFKVQLLLQLHWKDPRLEYRHYAPHITEMVGERNFIQNIWTPHIYLTNERDSLVLG 73
+ E+ + + W D RL++ I + N + IW P + N + +
Sbjct: 105 AINMEYTIDIFFAQTWYDRRLKFNST---IKVLRLNSNMVGKIWIPDTFFRNSKKADAHW 161
Query: 74 LYRRDMLVSILPDGDMLFSTR 94
+ + ++ I DG +L++ R
Sbjct: 162 ITTPNRMLRIWNDGRVLYTLR 182
>UNIPROTKB|P18507 [details] [associations]
symbol:GABRG2 "Gamma-aminobutyric acid receptor subunit
gamma-2" species:9606 "Homo sapiens" [GO:0004890 "GABA-A receptor
activity" evidence=IEA] [GO:0005230 "extracellular ligand-gated ion
channel activity" evidence=IEA] [GO:0007214 "gamma-aminobutyric
acid signaling pathway" evidence=IEA] [GO:0005254 "chloride channel
activity" evidence=IEA] [GO:0030054 "cell junction" evidence=IEA]
[GO:0034707 "chloride channel complex" evidence=IEA] [GO:0045211
"postsynaptic membrane" evidence=IEA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0005887 "integral to plasma membrane"
evidence=TAS] [GO:0008503 "benzodiazepine receptor activity"
evidence=TAS] [GO:0006810 "transport" evidence=TAS] [GO:0005886
"plasma membrane" evidence=TAS] [GO:0007268 "synaptic transmission"
evidence=TAS] [GO:0034220 "ion transmembrane transport"
evidence=TAS] [GO:0055085 "transmembrane transport" evidence=TAS]
[GO:0051932 "synaptic transmission, GABAergic" evidence=ISS]
[GO:0032590 "dendrite membrane" evidence=ISS] Reactome:REACT_13685
Reactome:REACT_15518 InterPro:IPR005437 InterPro:IPR005439
InterPro:IPR006028 InterPro:IPR006029 InterPro:IPR006201
InterPro:IPR006202 InterPro:IPR018000 Pfam:PF02931 Pfam:PF02932
PRINTS:PR00252 PRINTS:PR00253 PRINTS:PR01620 PRINTS:PR01622
PROSITE:PS00236 GO:GO:0005887 GO:GO:0030054 GO:GO:0045211
GO:GO:0005230 GO:GO:0004890 Gene3D:2.70.170.10 PANTHER:PTHR18945
SUPFAM:SSF90112 SUPFAM:SSF63712 TIGRFAMs:TIGR00860 GO:GO:0034220
GO:GO:0007214 GO:GO:0032590 GO:GO:0034707 GO:GO:0005254
Orphanet:64280 GO:GO:0051932 eggNOG:NOG238757 HOGENOM:HOG000231337
HOVERGEN:HBG051707 GO:GO:0008503 Orphanet:36387 KO:K05186
OrthoDB:EOG44BB25 CTD:2566 EMBL:X15376 EMBL:AF165124 EMBL:BC059389
EMBL:BC069348 EMBL:BC074795 IPI:IPI00000023 IPI:IPI00419200
PIR:S03905 RefSeq:NP_000807.2 RefSeq:NP_944494.1 UniGene:Hs.7195
ProteinModelPortal:P18507 SMR:P18507 STRING:P18507
PhosphoSite:P18507 DMDM:116242488 PRIDE:P18507
Ensembl:ENST00000356592 Ensembl:ENST00000361925 GeneID:2566
KEGG:hsa:2566 UCSC:uc003lyy.4 UCSC:uc003lyz.4 GeneCards:GC05P161494
HGNC:HGNC:4087 MIM:137164 MIM:604233 MIM:607208 MIM:607681
MIM:611277 neXtProt:NX_P18507 Orphanet:33069 PharmGKB:PA28501
BindingDB:P18507 ChEMBL:CHEMBL1788 GenomeRNAi:2566 NextBio:10145
ArrayExpress:P18507 Bgee:P18507 CleanEx:HS_GABRG2
Genevestigator:P18507 GermOnline:ENSG00000113327 Uniprot:P18507
Length = 467
Score = 209 (78.6 bits), Expect = 1.4e-20, Sum P(2) = 1.4e-20
Identities = 39/95 (41%), Positives = 60/95 (63%)
Query: 100 YSSLTLTFILNRQYGFYLMDFYAPSILLVCISWVSFWMAPDAVPGRTILGASTMLTFFQL 159
Y +++ F L+R+ G++ + Y P L+V +SWVSFW+ DAVP RT LG +T+LT L
Sbjct: 259 YVVMSVYFDLSRRMGYFTIQTYIPCTLIVVLSWVSFWINKDAVPARTSLGITTVLTMTTL 318
Query: 160 GIETGSSLPNVSYIRSNDVWFFACTVFIFLSLAEF 194
SLP VSY+ + D++ C +F+F +L E+
Sbjct: 319 STIARKSLPKVSYVTAMDLFVSVCFIFVFSALVEY 353
Score = 62 (26.9 bits), Expect = 1.4e-20, Sum P(2) = 1.4e-20
Identities = 16/81 (19%), Positives = 34/81 (41%)
Query: 14 SFQQEFKVQLLLQLHWKDPRLEYRHYAPHITEMVGERNFIQNIWTPHIYLTNERDSLVLG 73
+ E+ + + W D RL++ I + N + IW P + N + +
Sbjct: 106 AINMEYTIDIFFAQTWYDRRLKFNST---IKVLRLNSNMVGKIWIPDTFFRNSKKADAHW 162
Query: 74 LYRRDMLVSILPDGDMLFSTR 94
+ + ++ I DG +L++ R
Sbjct: 163 ITTPNRMLRIWNDGRVLYTLR 183
>UNIPROTKB|E2QVM5 [details] [associations]
symbol:GABRE "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0045211 "postsynaptic membrane" evidence=IEA]
[GO:0030054 "cell junction" evidence=IEA] [GO:0016021 "integral to
membrane" evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0005230 "extracellular ligand-gated ion channel activity"
evidence=IEA] [GO:0004890 "GABA-A receptor activity" evidence=IEA]
InterPro:IPR001390 InterPro:IPR006028 InterPro:IPR006029
InterPro:IPR006201 InterPro:IPR006202 InterPro:IPR018000
Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252 PRINTS:PR00253
PRINTS:PR01079 PROSITE:PS00236 GO:GO:0016021 GO:GO:0005886
GO:GO:0030054 GO:GO:0045211 GO:GO:0005230 GO:GO:0004890
Gene3D:2.70.170.10 PANTHER:PTHR18945 SUPFAM:SSF90112
SUPFAM:SSF63712 TIGRFAMs:TIGR00860 GeneTree:ENSGT00540000070314
CTD:2564 KO:K05185 OMA:LYTIRMT EMBL:AAEX03027052 RefSeq:XP_549340.3
Ensembl:ENSCAFT00000030414 GeneID:492220 KEGG:cfa:492220
NextBio:20864837 Uniprot:E2QVM5
Length = 488
Score = 206 (77.6 bits), Expect = 1.4e-20, Sum P(2) = 1.4e-20
Identities = 40/99 (40%), Positives = 60/99 (60%)
Query: 100 YSSLTLTFILNRQYGFYLMDFYAPSILLVCISWVSFWMAPDAVPGRTILGASTMLTFFQL 159
++ +TL F ++R++GF Y PS + +SWVSFW+ D+ P RT LG +++LT L
Sbjct: 259 FTVMTLYFNVSRRFGFVAFQNYVPSSVTTMLSWVSFWIKRDSAPARTSLGITSVLTMTTL 318
Query: 160 GIETGSSLPNVSYIRSNDVWFFACTVFIFLSLAEFAFVN 198
G + + P VSYI + D + C VF F +L EFA +N
Sbjct: 319 GTFSRKNFPRVSYITALDFYIAICFVFCFCALMEFAVLN 357
Score = 66 (28.3 bits), Expect = 1.4e-20, Sum P(2) = 1.4e-20
Identities = 19/86 (22%), Positives = 34/86 (39%)
Query: 10 IGNLSFQQ-EFKVQLLLQLHWKDPRLEYRHYAPHITEMVGERNFIQNIWTPHIYLTNERD 68
+G +S E+ + + W D RL Y V N + +W P N +
Sbjct: 101 LGPISIMDMEYTIDITFCQTWYDERLRYNG---SFESFVLNGNMVSQLWIPDTVFRNSKR 157
Query: 69 SLVLGLYRRDMLVSILPDGDMLFSTR 94
+ + + +V I DG +L++ R
Sbjct: 158 TQEHVITMPNQMVRIHKDGKVLYTIR 183
>UNIPROTKB|P78334 [details] [associations]
symbol:GABRE "Gamma-aminobutyric acid receptor subunit
epsilon" species:9606 "Homo sapiens" [GO:0004890 "GABA-A receptor
activity" evidence=IEA] [GO:0005230 "extracellular ligand-gated ion
channel activity" evidence=IEA] [GO:0005254 "chloride channel
activity" evidence=IEA] [GO:0030054 "cell junction" evidence=IEA]
[GO:0034707 "chloride channel complex" evidence=IEA] [GO:0045211
"postsynaptic membrane" evidence=IEA] [GO:0005887 "integral to
plasma membrane" evidence=TAS] [GO:0006810 "transport"
evidence=TAS] [GO:0007214 "gamma-aminobutyric acid signaling
pathway" evidence=TAS] InterPro:IPR006028 InterPro:IPR006029
InterPro:IPR006201 InterPro:IPR006202 InterPro:IPR008099
InterPro:IPR018000 Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252
PRINTS:PR00253 PRINTS:PR01723 PROSITE:PS00236 GO:GO:0005887
GO:GO:0030054 GO:GO:0045211 GO:GO:0005230 GO:GO:0004890
Gene3D:2.70.170.10 PANTHER:PTHR18945 SUPFAM:SSF90112
SUPFAM:SSF63712 TIGRFAMs:TIGR00860 GO:GO:0007214 GO:GO:0006810
GO:GO:0034707 GO:GO:0005254 HOGENOM:HOG000231337 HOVERGEN:HBG051707
EMBL:U66661 EMBL:Y09763 EMBL:Y09764 EMBL:Y09765 EMBL:Y07637
EMBL:U92283 EMBL:U92281 EMBL:U92282 IPI:IPI00297725
RefSeq:NP_004952.2 UniGene:Hs.22785 ProteinModelPortal:P78334
SMR:P78334 STRING:P78334 PhosphoSite:P78334 DMDM:13124728
PRIDE:P78334 DNASU:2564 Ensembl:ENST00000370328 GeneID:2564
KEGG:hsa:2564 UCSC:uc004ffi.3 CTD:2564 GeneCards:GC0XM151121
HGNC:HGNC:4085 HPA:HPA045918 MIM:300093 neXtProt:NX_P78334
PharmGKB:PA28499 eggNOG:NOG259781 InParanoid:P78334 KO:K05185
OMA:LYTIRMT OrthoDB:EOG4J9MZV PhylomeDB:P78334 BindingDB:P78334
ChEMBL:CHEMBL4635 ChiTaRS:GABRE GenomeRNAi:2564 NextBio:10131
ArrayExpress:P78334 Bgee:P78334 CleanEx:HS_GABRE
Genevestigator:P78334 GermOnline:ENSG00000102287 Uniprot:P78334
Length = 506
Score = 196 (74.1 bits), Expect = 1.4e-20, Sum P(2) = 1.4e-20
Identities = 37/96 (38%), Positives = 58/96 (60%)
Query: 103 LTLTFILNRQYGFYLMDFYAPSILLVCISWVSFWMAPDAVPGRTILGASTMLTFFQLGIE 162
+T+ F ++R++G+ Y PS + +SWVSFW+ ++ P RT LG +++LT LG
Sbjct: 267 MTIFFNVSRRFGYVAFQNYVPSSVTTMLSWVSFWIKTESAPARTSLGITSVLTMTTLGTF 326
Query: 163 TGSSLPNVSYIRSNDVWFFACTVFIFLSLAEFAFVN 198
+ + P VSYI + D + C VF F +L EFA +N
Sbjct: 327 SRKNFPRVSYITALDFYIAICFVFCFCALLEFAVLN 362
Score = 77 (32.2 bits), Expect = 1.4e-20, Sum P(2) = 1.4e-20
Identities = 20/86 (23%), Positives = 37/86 (43%)
Query: 10 IGNLSF-QQEFKVQLLLQLHWKDPRLEYRHYAPHITEMVGERNFIQNIWTPHIYLTNERD 68
+G LS E+ + ++ W D RL Y +V N + +W P + N +
Sbjct: 106 LGPLSILDMEYTIDIIFSQTWYDERLCYNDT---FESLVLNGNVVSQLWIPDTFFRNSKR 162
Query: 69 SLVLGLYRRDMLVSILPDGDMLFSTR 94
+ + + +V I DG +L++ R
Sbjct: 163 THEHEITMPNQMVRIYKDGKVLYTIR 188
>UNIPROTKB|P21548 [details] [associations]
symbol:GABRG2 "Gamma-aminobutyric acid receptor subunit
gamma-2" species:9031 "Gallus gallus" [GO:0004890 "GABA-A receptor
activity" evidence=IEA] [GO:0005230 "extracellular ligand-gated ion
channel activity" evidence=IEA] [GO:0007214 "gamma-aminobutyric
acid signaling pathway" evidence=IEA] [GO:0005254 "chloride channel
activity" evidence=IEA] [GO:0030054 "cell junction" evidence=IEA]
[GO:0034707 "chloride channel complex" evidence=IEA] [GO:0005886
"plasma membrane" evidence=IEA] [GO:0045211 "postsynaptic membrane"
evidence=IEA] InterPro:IPR005437 InterPro:IPR005439
InterPro:IPR006028 InterPro:IPR006029 InterPro:IPR006201
InterPro:IPR006202 InterPro:IPR018000 Pfam:PF02931 Pfam:PF02932
PRINTS:PR00252 PRINTS:PR00253 PRINTS:PR01620 PRINTS:PR01622
PROSITE:PS00236 GO:GO:0005886 GO:GO:0030054 GO:GO:0045211
GO:GO:0005230 GO:GO:0004890 Gene3D:2.70.170.10 PANTHER:PTHR18945
SUPFAM:SSF90112 SUPFAM:SSF63712 TIGRFAMs:TIGR00860 GO:GO:0007214
GO:GO:0034707 GO:GO:0005254 eggNOG:NOG238757 HOGENOM:HOG000231337
HOVERGEN:HBG051707 KO:K05186 CTD:2566 EMBL:X54944 IPI:IPI00577501
PIR:S13086 RefSeq:NP_990676.1 UniGene:Gga.50106
ProteinModelPortal:P21548 SMR:P21548 GeneID:396289 KEGG:gga:396289
NextBio:20816340 Uniprot:P21548
Length = 474
Score = 209 (78.6 bits), Expect = 1.5e-20, Sum P(2) = 1.5e-20
Identities = 39/95 (41%), Positives = 60/95 (63%)
Query: 100 YSSLTLTFILNRQYGFYLMDFYAPSILLVCISWVSFWMAPDAVPGRTILGASTMLTFFQL 159
Y +++ F L+R+ G++ + Y P L+V +SWVSFW+ DAVP RT LG +T+LT L
Sbjct: 258 YVVMSVYFNLSRRMGYFTIQTYIPCTLIVVLSWVSFWINKDAVPARTSLGITTVLTMTTL 317
Query: 160 GIETGSSLPNVSYIRSNDVWFFACTVFIFLSLAEF 194
SLP VSY+ + D++ C +F+F +L E+
Sbjct: 318 STIARKSLPKVSYVTAMDLFVSVCFIFVFSALVEY 352
Score = 62 (26.9 bits), Expect = 1.5e-20, Sum P(2) = 1.5e-20
Identities = 16/81 (19%), Positives = 34/81 (41%)
Query: 14 SFQQEFKVQLLLQLHWKDPRLEYRHYAPHITEMVGERNFIQNIWTPHIYLTNERDSLVLG 73
+ E+ + + W D RL++ I + N + IW P + N + +
Sbjct: 105 AINMEYTIDIFFAQTWYDRRLKFNST---IKVLRLNSNMVGKIWIPDTFFRNSKKADAHW 161
Query: 74 LYRRDMLVSILPDGDMLFSTR 94
+ + ++ I DG +L++ R
Sbjct: 162 ITTPNRMLRIWNDGRVLYTLR 182
>MGI|MGI:95623 [details] [associations]
symbol:Gabrg2 "gamma-aminobutyric acid (GABA) A receptor,
subunit gamma 2" species:10090 "Mus musculus" [GO:0004890 "GABA-A
receptor activity" evidence=ISO;IDA] [GO:0005216 "ion channel
activity" evidence=IEA] [GO:0005230 "extracellular ligand-gated ion
channel activity" evidence=IEA] [GO:0005254 "chloride channel
activity" evidence=ISO] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005737 "cytoplasm" evidence=ISO] [GO:0005886 "plasma membrane"
evidence=IEA] [GO:0006810 "transport" evidence=IEA] [GO:0006811
"ion transport" evidence=IEA] [GO:0006821 "chloride transport"
evidence=IEA] [GO:0007214 "gamma-aminobutyric acid signaling
pathway" evidence=IDA] [GO:0007268 "synaptic transmission"
evidence=IDA] [GO:0009791 "post-embryonic development"
evidence=IMP] [GO:0016020 "membrane" evidence=IEA] [GO:0016021
"integral to membrane" evidence=IEA] [GO:0030054 "cell junction"
evidence=IEA] [GO:0030424 "axon" evidence=IDA] [GO:0030534 "adult
behavior" evidence=IMP] [GO:0032590 "dendrite membrane"
evidence=ISO] [GO:0034707 "chloride channel complex" evidence=IEA]
[GO:0045202 "synapse" evidence=IEA] [GO:0045211 "postsynaptic
membrane" evidence=IEA] [GO:0051932 "synaptic transmission,
GABAergic" evidence=ISO] [GO:0060077 "inhibitory synapse"
evidence=ISO] InterPro:IPR005437 InterPro:IPR005439
InterPro:IPR006028 InterPro:IPR006029 InterPro:IPR006201
InterPro:IPR006202 InterPro:IPR018000 Pfam:PF02931 Pfam:PF02932
PRINTS:PR00252 PRINTS:PR00253 PRINTS:PR01620 PRINTS:PR01622
PROSITE:PS00236 MGI:MGI:95623 GO:GO:0005886 GO:GO:0005737
GO:GO:0007268 GO:GO:0030054 GO:GO:0045211 GO:GO:0005230
GO:GO:0004890 Gene3D:2.70.170.10 PANTHER:PTHR18945 SUPFAM:SSF90112
SUPFAM:SSF63712 TIGRFAMs:TIGR00860 GO:GO:0030424 GO:GO:0007214
GO:GO:0009791 GO:GO:0030534 GO:GO:0034707 GO:GO:0005254
eggNOG:NOG238757 HOGENOM:HOG000231337 HOVERGEN:HBG051707
GeneTree:ENSGT00540000070314 KO:K05186 OrthoDB:EOG44BB25 CTD:2566
EMBL:M86572 EMBL:M62374 EMBL:AF233775 EMBL:AF233776 EMBL:AF233777
EMBL:AF233778 EMBL:AF233779 EMBL:AF233780 EMBL:AF233781
EMBL:AF233782 EMBL:AF233783 EMBL:AF233784 EMBL:AF233785
EMBL:AF233786 EMBL:AF233787 EMBL:AF233788 EMBL:AF233789
EMBL:AF233790 EMBL:AF233791 EMBL:AF233792 EMBL:AF233793
EMBL:AF233794 EMBL:AF233795 EMBL:AF233796 EMBL:AF233797
EMBL:AF233798 EMBL:AF233799 EMBL:AF233800 EMBL:AF233801
EMBL:AF233802 EMBL:BC031762 IPI:IPI00131369 IPI:IPI00228358
PIR:JH0316 PIR:JH0317 RefSeq:NP_032099.1 UniGene:Mm.5309
ProteinModelPortal:P22723 SMR:P22723 DIP:DIP-48995N STRING:P22723
PhosphoSite:P22723 PRIDE:P22723 Ensembl:ENSMUST00000070725
Ensembl:ENSMUST00000070735 GeneID:14406 KEGG:mmu:14406
UCSC:uc007imb.1 InParanoid:P22723 OMA:GFTSQKS BindingDB:P22723
ChEMBL:CHEMBL2941 NextBio:285971 Bgee:P22723 Genevestigator:P22723
GermOnline:ENSMUSG00000020436 Uniprot:P22723
Length = 474
Score = 209 (78.6 bits), Expect = 1.5e-20, Sum P(2) = 1.5e-20
Identities = 39/95 (41%), Positives = 60/95 (63%)
Query: 100 YSSLTLTFILNRQYGFYLMDFYAPSILLVCISWVSFWMAPDAVPGRTILGASTMLTFFQL 159
Y +++ F L+R+ G++ + Y P L+V +SWVSFW+ DAVP RT LG +T+LT L
Sbjct: 258 YVVMSVYFDLSRRMGYFTIQTYIPCTLIVVLSWVSFWINKDAVPARTSLGITTVLTMTTL 317
Query: 160 GIETGSSLPNVSYIRSNDVWFFACTVFIFLSLAEF 194
SLP VSY+ + D++ C +F+F +L E+
Sbjct: 318 STIARKSLPKVSYVTAMDLFVSVCFIFVFSALVEY 352
Score = 62 (26.9 bits), Expect = 1.5e-20, Sum P(2) = 1.5e-20
Identities = 16/81 (19%), Positives = 34/81 (41%)
Query: 14 SFQQEFKVQLLLQLHWKDPRLEYRHYAPHITEMVGERNFIQNIWTPHIYLTNERDSLVLG 73
+ E+ + + W D RL++ I + N + IW P + N + +
Sbjct: 105 AINMEYTIDIFFAQTWYDRRLKFNST---IKVLRLNSNMVGKIWIPDTFFRNSKKADAHW 161
Query: 74 LYRRDMLVSILPDGDMLFSTR 94
+ + ++ I DG +L++ R
Sbjct: 162 ITTPNRMLRIWNDGRVLYTLR 182
>UNIPROTKB|Q6PW52 [details] [associations]
symbol:Gabrg2 "GABA-A gamma2 long isoform" species:10116
"Rattus norvegicus" [GO:0009791 "post-embryonic development"
evidence=IEA] [GO:0030054 "cell junction" evidence=IEA] [GO:0030424
"axon" evidence=IEA] [GO:0030534 "adult behavior" evidence=IEA]
InterPro:IPR005437 InterPro:IPR005439 InterPro:IPR006028
InterPro:IPR006029 InterPro:IPR006201 InterPro:IPR006202
InterPro:IPR018000 Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252
PRINTS:PR00253 PRINTS:PR01620 PRINTS:PR01622 PROSITE:PS00236
RGD:61966 GO:GO:0016021 GO:GO:0005886 GO:GO:0007268 GO:GO:0030054
GO:GO:0045211 GO:GO:0005230 GO:GO:0004890 Gene3D:2.70.170.10
PANTHER:PTHR18945 SUPFAM:SSF90112 SUPFAM:SSF63712
TIGRFAMs:TIGR00860 GO:GO:0030424 GO:GO:0007214 GO:GO:0009791
GO:GO:0030534 EMBL:CH473948 GO:GO:0006821 HOGENOM:HOG000231337
HOVERGEN:HBG051707 OMA:GFTSQKS UniGene:Rn.230132 EMBL:AY574252
IPI:IPI00202998 SMR:Q6PW52 STRING:Q6PW52 Ensembl:ENSRNOT00000004658
InParanoid:Q6PW52 Genevestigator:Q6PW52 Uniprot:Q6PW52
Length = 474
Score = 209 (78.6 bits), Expect = 1.5e-20, Sum P(2) = 1.5e-20
Identities = 39/95 (41%), Positives = 60/95 (63%)
Query: 100 YSSLTLTFILNRQYGFYLMDFYAPSILLVCISWVSFWMAPDAVPGRTILGASTMLTFFQL 159
Y +++ F L+R+ G++ + Y P L+V +SWVSFW+ DAVP RT LG +T+LT L
Sbjct: 258 YVVMSVYFDLSRRMGYFTIQTYIPCTLIVVLSWVSFWINKDAVPARTSLGITTVLTMTTL 317
Query: 160 GIETGSSLPNVSYIRSNDVWFFACTVFIFLSLAEF 194
SLP VSY+ + D++ C +F+F +L E+
Sbjct: 318 STIARKSLPKVSYVTAMDLFVSVCFIFVFSALVEY 352
Score = 62 (26.9 bits), Expect = 1.5e-20, Sum P(2) = 1.5e-20
Identities = 16/81 (19%), Positives = 34/81 (41%)
Query: 14 SFQQEFKVQLLLQLHWKDPRLEYRHYAPHITEMVGERNFIQNIWTPHIYLTNERDSLVLG 73
+ E+ + + W D RL++ I + N + IW P + N + +
Sbjct: 105 AINMEYTIDIFFAQTWYDRRLKFNST---IKVLRLNSNMVGKIWIPDTFFRNSKKADAHW 161
Query: 74 LYRRDMLVSILPDGDMLFSTR 94
+ + ++ I DG +L++ R
Sbjct: 162 ITTPNRMLRIWNDGRVLYTLR 182
>UNIPROTKB|F5HB82 [details] [associations]
symbol:GABRG2 "Gamma-aminobutyric acid receptor subunit
gamma-2" species:9606 "Homo sapiens" [GO:0005230 "extracellular
ligand-gated ion channel activity" evidence=IEA] [GO:0016021
"integral to membrane" evidence=IEA] [GO:0030054 "cell junction"
evidence=IEA] [GO:0045211 "postsynaptic membrane" evidence=IEA]
[GO:0004890 "GABA-A receptor activity" evidence=IEA] [GO:0005254
"chloride channel activity" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0007214 "gamma-aminobutyric acid signaling
pathway" evidence=IEA] [GO:0009791 "post-embryonic development"
evidence=IEA] [GO:0030424 "axon" evidence=IEA] [GO:0030534 "adult
behavior" evidence=IEA] [GO:0032590 "dendrite membrane"
evidence=IEA] [GO:0051932 "synaptic transmission, GABAergic"
evidence=IEA] [GO:0060077 "inhibitory synapse" evidence=IEA]
InterPro:IPR005437 InterPro:IPR005439 InterPro:IPR006028
InterPro:IPR006029 InterPro:IPR006201 InterPro:IPR006202
InterPro:IPR018000 Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252
PRINTS:PR00253 PRINTS:PR01620 PRINTS:PR01622 PROSITE:PS00236
GO:GO:0016021 GO:GO:0005886 GO:GO:0005737 GO:GO:0007268
GO:GO:0030054 GO:GO:0045211 GO:GO:0005230 GO:GO:0004890
Gene3D:2.70.170.10 PANTHER:PTHR18945 SUPFAM:SSF90112
SUPFAM:SSF63712 GO:GO:0030424 GO:GO:0007214 GO:GO:0009791
GO:GO:0030534 GO:GO:0005254 KO:K05186 CTD:2566 UniGene:Hs.7195
GeneID:2566 KEGG:hsa:2566 HGNC:HGNC:4087 GenomeRNAi:2566
NextBio:10145 OMA:GFTSQKS EMBL:AC008611 EMBL:AC091926 EMBL:AC091984
IPI:IPI00396250 RefSeq:NP_944493.2 ProteinModelPortal:F5HB82
SMR:F5HB82 PRIDE:F5HB82 Ensembl:ENST00000414552 UCSC:uc010jjc.3
ArrayExpress:F5HB82 Bgee:F5HB82 Uniprot:F5HB82
Length = 515
Score = 209 (78.6 bits), Expect = 2.1e-20, Sum P(2) = 2.1e-20
Identities = 39/95 (41%), Positives = 60/95 (63%)
Query: 100 YSSLTLTFILNRQYGFYLMDFYAPSILLVCISWVSFWMAPDAVPGRTILGASTMLTFFQL 159
Y +++ F L+R+ G++ + Y P L+V +SWVSFW+ DAVP RT LG +T+LT L
Sbjct: 299 YVVMSVYFDLSRRMGYFTIQTYIPCTLIVVLSWVSFWINKDAVPARTSLGITTVLTMTTL 358
Query: 160 GIETGSSLPNVSYIRSNDVWFFACTVFIFLSLAEF 194
SLP VSY+ + D++ C +F+F +L E+
Sbjct: 359 STIARKSLPKVSYVTAMDLFVSVCFIFVFSALVEY 393
Score = 62 (26.9 bits), Expect = 2.1e-20, Sum P(2) = 2.1e-20
Identities = 16/81 (19%), Positives = 34/81 (41%)
Query: 14 SFQQEFKVQLLLQLHWKDPRLEYRHYAPHITEMVGERNFIQNIWTPHIYLTNERDSLVLG 73
+ E+ + + W D RL++ I + N + IW P + N + +
Sbjct: 106 AINMEYTIDIFFAQTWYDRRLKFNST---IKVLRLNSNMVGKIWIPDTFFRNSKKADAHW 162
Query: 74 LYRRDMLVSILPDGDMLFSTR 94
+ + ++ I DG +L++ R
Sbjct: 163 ITTPNRMLRIWNDGRVLYTLR 183
>UNIPROTKB|G3MWU9 [details] [associations]
symbol:GABRE "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0045211 "postsynaptic membrane" evidence=IEA]
[GO:0030054 "cell junction" evidence=IEA] [GO:0016021 "integral to
membrane" evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0005230 "extracellular ligand-gated ion channel activity"
evidence=IEA] [GO:0004890 "GABA-A receptor activity" evidence=IEA]
InterPro:IPR001390 InterPro:IPR006028 InterPro:IPR006029
InterPro:IPR006201 InterPro:IPR006202 InterPro:IPR018000
Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252 PRINTS:PR00253
PRINTS:PR01079 PROSITE:PS00236 GO:GO:0016021 GO:GO:0005886
GO:GO:0030054 GO:GO:0045211 GO:GO:0005230 GO:GO:0004890
Gene3D:2.70.170.10 PANTHER:PTHR18945 SUPFAM:SSF90112
SUPFAM:SSF63712 TIGRFAMs:TIGR00860 GeneTree:ENSGT00540000070314
EMBL:DAAA02068166 Ensembl:ENSBTAT00000065531 Uniprot:G3MWU9
Length = 495
Score = 200 (75.5 bits), Expect = 2.5e-20, Sum P(2) = 2.5e-20
Identities = 38/96 (39%), Positives = 58/96 (60%)
Query: 103 LTLTFILNRQYGFYLMDFYAPSILLVCISWVSFWMAPDAVPGRTILGASTMLTFFQLGIE 162
+TL F ++R++GF Y PS + +SW+SFW+ ++ P RT LG +++LT LG
Sbjct: 268 MTLYFNVSRRFGFVAFHNYVPSSVTTMVSWISFWIKKESAPARTSLGITSVLTMTTLGTF 327
Query: 163 TGSSLPNVSYIRSNDVWFFACTVFIFLSLAEFAFVN 198
+ + P VSYI + D + C VF F +L EFA +N
Sbjct: 328 SRKNFPRVSYITALDFYIAICFVFCFCALMEFAVLN 363
Score = 70 (29.7 bits), Expect = 2.5e-20, Sum P(2) = 2.5e-20
Identities = 19/86 (22%), Positives = 35/86 (40%)
Query: 10 IGNLSFQQ-EFKVQLLLQLHWKDPRLEYRHYAPHITEMVGERNFIQNIWTPHIYLTNERD 68
+G LS E+ + + W D RL + V N + +W P + N +
Sbjct: 107 LGPLSIMDMEYTIDITFCQTWYDERLRFNG---SFESFVLSGNLVSLLWVPDTFFRNSKR 163
Query: 69 SLVLGLYRRDMLVSILPDGDMLFSTR 94
+ + + +V I DG +L++ R
Sbjct: 164 TYEHSITMPNQMVRIHKDGKVLYTIR 189
>ZFIN|ZDB-GENE-081105-170 [details] [associations]
symbol:gabrd "gamma-aminobutyric acid (GABA) A
receptor, delta" species:7955 "Danio rerio" [GO:0005230
"extracellular ligand-gated ion channel activity" evidence=IEA]
[GO:0006811 "ion transport" evidence=IEA] [GO:0016020 "membrane"
evidence=IEA] [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0045211 "postsynaptic membrane" evidence=IEA] [GO:0004890
"GABA-A receptor activity" evidence=IEA] [GO:0006810 "transport"
evidence=IEA] [GO:0030054 "cell junction" evidence=IEA] [GO:0005886
"plasma membrane" evidence=IEA] [GO:0045202 "synapse" evidence=IEA]
InterPro:IPR006028 InterPro:IPR006029 InterPro:IPR006201
InterPro:IPR006202 InterPro:IPR008098 InterPro:IPR018000
Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252 PRINTS:PR00253
PRINTS:PR01722 PROSITE:PS00236 ZFIN:ZDB-GENE-081105-170
GO:GO:0016021 GO:GO:0005886 GO:GO:0030054 GO:GO:0045211
GO:GO:0005230 GO:GO:0004890 Gene3D:2.70.170.10 PANTHER:PTHR18945
SUPFAM:SSF90112 SUPFAM:SSF63712 TIGRFAMs:TIGR00860
GeneTree:ENSGT00630000089571 EMBL:FP017199 IPI:IPI00998683
Ensembl:ENSDART00000132000 ArrayExpress:E9QHL0 Bgee:E9QHL0
Uniprot:E9QHL0
Length = 469
Score = 246 (91.7 bits), Expect = 2.6e-20, P = 2.6e-20
Identities = 54/140 (38%), Positives = 81/140 (57%)
Query: 61 IYLTNERDSLVLGLYRRDMLVSILPDGDMLFSTRS--RAYMYSSLTLTFILNRQYGFYLM 118
+Y +E L+ GL + ++ + D + + A + L+L F L R G Y++
Sbjct: 204 VYHWSESQKLIHGLDKLELSQFTITDYRFVTEMMNFKSAGRFPRLSLRFQLRRNRGVYII 263
Query: 119 DFYAPSILLVCISWVSFWMAPDAVPGRTILGASTMLTFFQLGIETGSSLPNVSYIRSNDV 178
Y PSILLV +SWVSFW++ AVP R LG +T+LT L + SSLP S I++ DV
Sbjct: 264 QSYMPSILLVAMSWVSFWISQSAVPARVSLGITTVLTMTTLMVSARSSLPRASAIKALDV 323
Query: 179 WFFACTVFIFLSLAEFAFVN 198
+F+ C VF+F +L E+AF +
Sbjct: 324 YFWICYVFVFAALIEYAFAH 343
>UNIPROTKB|F1MU41 [details] [associations]
symbol:GABRE "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0045211 "postsynaptic membrane" evidence=IEA]
[GO:0030054 "cell junction" evidence=IEA] [GO:0016021 "integral to
membrane" evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0005230 "extracellular ligand-gated ion channel activity"
evidence=IEA] [GO:0004890 "GABA-A receptor activity" evidence=IEA]
InterPro:IPR001390 InterPro:IPR006028 InterPro:IPR006029
InterPro:IPR006201 InterPro:IPR006202 InterPro:IPR018000
Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252 PRINTS:PR00253
PRINTS:PR01079 PROSITE:PS00236 GO:GO:0016021 GO:GO:0005886
GO:GO:0030054 GO:GO:0045211 GO:GO:0005230 GO:GO:0004890
Gene3D:2.70.170.10 PANTHER:PTHR18945 SUPFAM:SSF90112
SUPFAM:SSF63712 TIGRFAMs:TIGR00860 GeneTree:ENSGT00540000070314
OMA:LYTIRMT EMBL:DAAA02068166 IPI:IPI00698565
Ensembl:ENSBTAT00000018017 Uniprot:F1MU41
Length = 508
Score = 200 (75.5 bits), Expect = 2.8e-20, Sum P(2) = 2.8e-20
Identities = 38/96 (39%), Positives = 58/96 (60%)
Query: 103 LTLTFILNRQYGFYLMDFYAPSILLVCISWVSFWMAPDAVPGRTILGASTMLTFFQLGIE 162
+TL F ++R++GF Y PS + +SW+SFW+ ++ P RT LG +++LT LG
Sbjct: 267 MTLYFNVSRRFGFVAFHNYVPSSVTTMVSWISFWIKKESAPARTSLGITSVLTMTTLGTF 326
Query: 163 TGSSLPNVSYIRSNDVWFFACTVFIFLSLAEFAFVN 198
+ + P VSYI + D + C VF F +L EFA +N
Sbjct: 327 SRKNFPRVSYITALDFYIAICFVFCFCALMEFAVLN 362
Score = 70 (29.7 bits), Expect = 2.8e-20, Sum P(2) = 2.8e-20
Identities = 19/86 (22%), Positives = 35/86 (40%)
Query: 10 IGNLSFQQ-EFKVQLLLQLHWKDPRLEYRHYAPHITEMVGERNFIQNIWTPHIYLTNERD 68
+G LS E+ + + W D RL + V N + +W P + N +
Sbjct: 106 LGPLSIMDMEYTIDITFCQTWYDERLRFNG---SFESFVLSGNLVSLLWVPDTFFRNSKR 162
Query: 69 SLVLGLYRRDMLVSILPDGDMLFSTR 94
+ + + +V I DG +L++ R
Sbjct: 163 TYEHSITMPNQMVRIHKDGKVLYTIR 188
>WB|WBGene00020605 [details] [associations]
symbol:lgc-50 species:6239 "Caenorhabditis elegans"
[GO:0006811 "ion transport" evidence=IEA] [GO:0016021 "integral to
membrane" evidence=IEA] [GO:0016020 "membrane" evidence=IEA]
[GO:0005230 "extracellular ligand-gated ion channel activity"
evidence=IEA] [GO:0006810 "transport" evidence=IEA] [GO:0045211
"postsynaptic membrane" evidence=IEA] InterPro:IPR006028
InterPro:IPR006029 InterPro:IPR006201 InterPro:IPR006202
InterPro:IPR018000 Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252
PRINTS:PR00253 PROSITE:PS00236 GO:GO:0016021 GO:GO:0005886
GO:GO:0030054 GO:GO:0045211 GO:GO:0005230 Gene3D:2.70.170.10
PANTHER:PTHR18945 SUPFAM:SSF90112 SUPFAM:SSF63712 EMBL:FO081094
PIR:T16909 RefSeq:NP_498637.3 ProteinModelPortal:P41849 SMR:P41849
PaxDb:P41849 GeneID:188633 KEGG:cel:CELE_T20B12.9 CTD:188633
WormBase:T20B12.9 eggNOG:NOG322447 HOGENOM:HOG000016259
InParanoid:P41849 OMA:SPSENTF NextBio:939524 Uniprot:P41849
Length = 491
Score = 183 (69.5 bits), Expect = 3.0e-20, Sum P(2) = 3.0e-20
Identities = 48/127 (37%), Positives = 65/127 (51%)
Query: 84 LPDGDML-FSTRSRAYMYSS-----LTLTFILNRQYGFYLMDFYAPSILLVCISWVSFWM 137
LPD D++ +ST + Y + + F R+YGFYL Y P+ L V SWV F+
Sbjct: 202 LPDFDLIGWSTDHQRLEYPNGIWDRAKVKFTFARRYGFYLFQSYFPTSLTVISSWVGFFF 261
Query: 138 APDAVPGRTILGASTMLTF-FQLGIETGSSLPNVSYIRSNDVWFFACTVFIFLSLAEFAF 196
+V R LG S++L FQ G LP VSYI+ DVW +FIF +L E A
Sbjct: 262 DVRSVSARITLGVSSLLALTFQFG-NVLRHLPRVSYIKCLDVWMIFSVIFIFCTLVELAI 320
Query: 197 VNTIWRY 203
V + R+
Sbjct: 321 VCQLNRW 327
Score = 87 (35.7 bits), Expect = 3.0e-20, Sum P(2) = 3.0e-20
Identities = 15/54 (27%), Positives = 29/54 (53%)
Query: 18 EFKVQLLLQLHWKDPRLEYRHYAPHITEMVGERNFIQNIWTPHIYLTNERDSLV 71
+F + ++ W+DPRL ++H T + + +F + IWTP + N + S +
Sbjct: 74 DFSLDVMYSEIWQDPRLSFKHLNVCATNITLKSDFRKKIWTPDTCIINSKSSSI 127
>UNIPROTKB|P41849 [details] [associations]
symbol:lgc-50 "Ligand-gated ion channel 50" species:6239
"Caenorhabditis elegans" [GO:0008150 "biological_process"
evidence=ND] [GO:0003674 "molecular_function" evidence=ND]
[GO:0005575 "cellular_component" evidence=ND] InterPro:IPR006028
InterPro:IPR006029 InterPro:IPR006201 InterPro:IPR006202
InterPro:IPR018000 Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252
PRINTS:PR00253 PROSITE:PS00236 GO:GO:0016021 GO:GO:0005886
GO:GO:0030054 GO:GO:0045211 GO:GO:0005230 Gene3D:2.70.170.10
PANTHER:PTHR18945 SUPFAM:SSF90112 SUPFAM:SSF63712 EMBL:FO081094
PIR:T16909 RefSeq:NP_498637.3 ProteinModelPortal:P41849 SMR:P41849
PaxDb:P41849 GeneID:188633 KEGG:cel:CELE_T20B12.9 CTD:188633
WormBase:T20B12.9 eggNOG:NOG322447 HOGENOM:HOG000016259
InParanoid:P41849 OMA:SPSENTF NextBio:939524 Uniprot:P41849
Length = 491
Score = 183 (69.5 bits), Expect = 3.0e-20, Sum P(2) = 3.0e-20
Identities = 48/127 (37%), Positives = 65/127 (51%)
Query: 84 LPDGDML-FSTRSRAYMYSS-----LTLTFILNRQYGFYLMDFYAPSILLVCISWVSFWM 137
LPD D++ +ST + Y + + F R+YGFYL Y P+ L V SWV F+
Sbjct: 202 LPDFDLIGWSTDHQRLEYPNGIWDRAKVKFTFARRYGFYLFQSYFPTSLTVISSWVGFFF 261
Query: 138 APDAVPGRTILGASTMLTF-FQLGIETGSSLPNVSYIRSNDVWFFACTVFIFLSLAEFAF 196
+V R LG S++L FQ G LP VSYI+ DVW +FIF +L E A
Sbjct: 262 DVRSVSARITLGVSSLLALTFQFG-NVLRHLPRVSYIKCLDVWMIFSVIFIFCTLVELAI 320
Query: 197 VNTIWRY 203
V + R+
Sbjct: 321 VCQLNRW 327
Score = 87 (35.7 bits), Expect = 3.0e-20, Sum P(2) = 3.0e-20
Identities = 15/54 (27%), Positives = 29/54 (53%)
Query: 18 EFKVQLLLQLHWKDPRLEYRHYAPHITEMVGERNFIQNIWTPHIYLTNERDSLV 71
+F + ++ W+DPRL ++H T + + +F + IWTP + N + S +
Sbjct: 74 DFSLDVMYSEIWQDPRLSFKHLNVCATNITLKSDFRKKIWTPDTCIINSKSSSI 127
>WB|WBGene00001586 [details] [associations]
symbol:ggr-1 species:6239 "Caenorhabditis elegans"
[GO:0006811 "ion transport" evidence=IEA] [GO:0016021 "integral to
membrane" evidence=IEA] [GO:0016020 "membrane" evidence=IEA]
[GO:0005230 "extracellular ligand-gated ion channel activity"
evidence=IEA] [GO:0006810 "transport" evidence=IEA] [GO:0045211
"postsynaptic membrane" evidence=IEA] InterPro:IPR006028
InterPro:IPR006029 InterPro:IPR006201 InterPro:IPR006202
InterPro:IPR018000 Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252
PRINTS:PR00253 PROSITE:PS00236 GO:GO:0005886 GO:GO:0030054
GO:GO:0045211 GO:GO:0005230 Gene3D:2.70.170.10 PANTHER:PTHR18945
SUPFAM:SSF90112 SUPFAM:SSF63712 TIGRFAMs:TIGR00860 GO:GO:0034707
GO:GO:0005254 EMBL:Z46791 GeneTree:ENSGT00540000070314
HOGENOM:HOG000231336 PIR:T19145 RefSeq:NP_496306.2
ProteinModelPortal:Q09453 SMR:Q09453 PaxDb:Q09453
EnsemblMetazoa:C09G5.1 GeneID:191636 KEGG:cel:CELE_C09G5.1
UCSC:C09G5.1 CTD:191636 WormBase:C09G5.1 eggNOG:NOG307434
InParanoid:Q09453 KO:K05397 OMA:REITHHI NextBio:949766
Uniprot:Q09453
Length = 473
Score = 190 (71.9 bits), Expect = 3.0e-20, Sum P(2) = 3.0e-20
Identities = 39/111 (35%), Positives = 61/111 (54%)
Query: 91 FSTRSRAY---MYSSLTLTFILNRQYGFYLMDFYAPSILLVCISWVSFWMAPDAVPGRTI 147
F T+ Y ++SS F ++R+ +++ Y P+ L+V ISW SFW+ +AVPGR
Sbjct: 222 FYTKRDKYATGIWSSAVAEFHVDREITHHIIQSYIPTSLIVIISWFSFWLDVEAVPGRVS 281
Query: 148 LGASTMLTFFQLGIETGSSLPNVSYIRSNDVWFFACTVFIFLSLAEFAFVN 198
L +T+LT +LP S +++ DVW C F+F ++ EF VN
Sbjct: 282 LSITTLLTLATQSSAARMALPQASDVKAIDVWMGTCMAFVFSAMIEFTVVN 332
Score = 79 (32.9 bits), Expect = 3.0e-20, Sum P(2) = 3.0e-20
Identities = 20/77 (25%), Positives = 37/77 (48%)
Query: 18 EFKVQLLLQLHWKDPRLEYRHYAPHITEMVGERNFIQNIWTPHIYLTNERDSLVLGLYRR 77
+F+V + Q W D RL++ + I +V + +W P +Y N R + + +
Sbjct: 86 DFQVDIYFQEKWVDHRLQHNN-TKRI--LVKDPKLFGLLWHPDLYFANARTASFHDVTQP 142
Query: 78 DMLVSILPDGDMLFSTR 94
+ LV I P+G + + R
Sbjct: 143 NFLVWIYPNGTVWYDCR 159
>UNIPROTKB|F1NEM1 [details] [associations]
symbol:GLRA4 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0005230 "extracellular ligand-gated ion channel
activity" evidence=IEA] [GO:0005887 "integral to plasma membrane"
evidence=IEA] [GO:0016594 "glycine binding" evidence=IEA]
[GO:0022824 "transmitter-gated ion channel activity" evidence=IEA]
[GO:0030054 "cell junction" evidence=IEA] [GO:0045211 "postsynaptic
membrane" evidence=IEA] InterPro:IPR006028 InterPro:IPR006029
InterPro:IPR006201 InterPro:IPR006202 InterPro:IPR008127
InterPro:IPR018000 Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252
PRINTS:PR00253 PRINTS:PR01673 PROSITE:PS00236 GO:GO:0005887
GO:GO:0030054 GO:GO:0045211 GO:GO:0005230 Gene3D:2.70.170.10
PANTHER:PTHR18945 SUPFAM:SSF90112 SUPFAM:SSF63712
TIGRFAMs:TIGR00860 GeneTree:ENSGT00550000074453 GO:GO:0016594
GO:GO:0022824 OMA:FYFASLC EMBL:AADN02013212 IPI:IPI00580780
Ensembl:ENSGALT00000007899 Uniprot:F1NEM1
Length = 453
Score = 244 (91.0 bits), Expect = 3.8e-20, P = 3.8e-20
Identities = 44/103 (42%), Positives = 67/103 (65%)
Query: 100 YSSLTLTFILNRQYGFYLMDFYAPSILLVCISWVSFWMAPDAVPGRTILGASTMLTFFQL 159
++ + + F L RQ G+YL+ Y PS+L+V +SWVSFW+ DA P R LG +T+LT
Sbjct: 239 FTCIEVKFHLERQMGYYLIQMYIPSLLIVILSWVSFWINMDAAPARVGLGITTVLTMTTQ 298
Query: 160 GIETGSSLPNVSYIRSNDVWFFACTVFIFLSLAEFAFVNTIWR 202
+ +SLP VSY+++ D+W C +F+F +L E+A VN + R
Sbjct: 299 SAGSRASLPKVSYVKAIDIWMAVCLLFVFAALLEYAAVNFVSR 341
Score = 114 (45.2 bits), Expect = 0.00027, P = 0.00027
Identities = 28/131 (21%), Positives = 62/131 (47%)
Query: 18 EFKVQLLLQLHWKDPRLEYRHYAPHITEMVGERNFIQNIWTPHIYLTNERDSLVLGLYRR 77
+++V + L+ W DPRL YR Y ++ + + + +IW P ++ NE+ + +
Sbjct: 88 DYRVNVFLRQQWNDPRLAYREYPDDSLDL--DPSMLDSIWKPDLFFANEKGANFHEVTTD 145
Query: 78 DMLVSILPDGDMLFSTRSRAYMYSSLTL-TFILNRQYGFYLMDFYAPSILLVCISWVSFW 136
+ L+ I +G++L+S R + + L F ++ Q ++ + ++ + W+
Sbjct: 146 NKLLRIFKNGNVLYSIRLTLILSCPMDLKNFPMDIQTCTMQLESFGYTMNDLIFEWLEEQ 205
Query: 137 MAPDAVPGRTI 147
A G T+
Sbjct: 206 EAVQVAEGLTL 216
>FB|FBgn0264908 [details] [associations]
symbol:pHCl species:7227 "Drosophila melanogaster"
[GO:0016934 "extracellular-glycine-gated chloride channel activity"
evidence=ISS] [GO:0016935 "glycine-gated chloride channel complex"
evidence=ISS] [GO:0006811 "ion transport" evidence=IEA] [GO:0005254
"chloride channel activity" evidence=IDA] [GO:0022008
"neurogenesis" evidence=IMP] InterPro:IPR006028 InterPro:IPR006029
InterPro:IPR006201 InterPro:IPR006202 Pfam:PF02931 Pfam:PF02932
PRINTS:PR00253 GO:GO:0016021 GO:GO:0005886 EMBL:AE014296
GO:GO:0022008 GO:GO:0005230 Gene3D:2.70.170.10 PANTHER:PTHR18945
SUPFAM:SSF90112 SUPFAM:SSF63712 GO:GO:0005254
GeneTree:ENSGT00540000070314 InterPro:IPR015680
PANTHER:PTHR18945:SF26 UniGene:Dm.4038 GeneID:39730
KEGG:dme:Dmel_CG33989 CTD:39730 FlyBase:FBgn0264908
GenomeRNAi:39730 NextBio:815085 RefSeq:NP_001034024.2
ProteinModelPortal:Q2PDY9 SMR:Q2PDY9 PRIDE:Q2PDY9
EnsemblMetazoa:FBtr0100037 UCSC:CG33989-RF OMA:ETANDSK
OrthoDB:EOG40P2P5 PhylomeDB:Q2PDY9 Bgee:Q2PDY9 Uniprot:Q2PDY9
Length = 779
Score = 198 (74.8 bits), Expect = 3.9e-20, Sum P(2) = 3.9e-20
Identities = 41/103 (39%), Positives = 59/103 (57%)
Query: 100 YSSLTLTFILNRQYGFYLMDFYAPSILLVCISWVSFWMAPDAVPGRTILGASTMLTFFQL 159
YS L + I R FY + P I+LV S+++FW+ +AVP R+++G +TML FF
Sbjct: 556 YSCLRVDLIFTRDRAFYFTTVFIPGIILVTSSFITFWLEWNAVPARSMIGVTTMLNFFTT 615
Query: 160 GIETGSSLPNVSYIRSNDVWFFACTVFIFLSLAEFAFVNTIWR 202
S+LP VS + + +VW C FI+ SL EF VN + R
Sbjct: 616 SNGFRSTLPVVSNLTAMNVWDGVCMCFIYASLLEFVCVNYVGR 658
Score = 77 (32.2 bits), Expect = 3.9e-20, Sum P(2) = 3.9e-20
Identities = 15/51 (29%), Positives = 27/51 (52%)
Query: 18 EFKVQLLLQLHWKDPRLEYRHYAPHITEMVGERNFIQNIWTPHIYLTNERD 68
+++V+ LL W DPRL+Y + + + + + + +IWTP Y D
Sbjct: 407 KYEVEFLLNQQWNDPRLQYGNKSHY--DFLNALHHHDSIWTPDTYFIMHGD 455
>UNIPROTKB|E1BQL4 [details] [associations]
symbol:GABRD "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0005230 "extracellular ligand-gated ion channel
activity" evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0016021 "integral to membrane" evidence=IEA] [GO:0030054 "cell
junction" evidence=IEA] [GO:0045211 "postsynaptic membrane"
evidence=IEA] InterPro:IPR006028 InterPro:IPR006029
InterPro:IPR006201 InterPro:IPR006202 InterPro:IPR018000
Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252 PRINTS:PR00253
PROSITE:PS00236 GO:GO:0016021 GO:GO:0005886 GO:GO:0030054
GO:GO:0045211 GO:GO:0005230 Gene3D:2.70.170.10 PANTHER:PTHR18945
SUPFAM:SSF90112 SUPFAM:SSF63712 TIGRFAMs:TIGR00860 OMA:EYTMTVF
GeneTree:ENSGT00630000089571 EMBL:AADN02040874 IPI:IPI00599008
Ensembl:ENSGALT00000001958 Uniprot:E1BQL4
Length = 430
Score = 242 (90.2 bits), Expect = 5.1e-20, P = 5.1e-20
Identities = 48/102 (47%), Positives = 66/102 (64%)
Query: 97 AYMYSSLTLTFILNRQYGFYLMDFYAPSILLVCISWVSFWMAPDAVPGRTILGASTMLTF 156
A + L+L F L R G Y++ Y PSILLV +SWVSFW++ AVP R LG +T+LT
Sbjct: 207 AGQFPRLSLHFHLRRNRGVYIIQSYVPSILLVAMSWVSFWISQSAVPARVSLGITTVLTM 266
Query: 157 FQLGIETGSSLPNVSYIRSNDVWFFACTVFIFLSLAEFAFVN 198
L + SSLP S I++ DV+F+ C VF+F +L E+AF +
Sbjct: 267 TTLMVSARSSLPRASAIKALDVYFWICYVFVFAALVEYAFAH 308
>FB|FBgn0001134 [details] [associations]
symbol:Grd "Glycine receptor" species:7227 "Drosophila
melanogaster" [GO:0015276 "ligand-gated ion channel activity"
evidence=ISS] [GO:0005886 "plasma membrane" evidence=ISS]
[GO:0016933 "extracellular-glycine-gated ion channel activity"
evidence=ISS] [GO:0045211 "postsynaptic membrane" evidence=IEA]
[GO:0005230 "extracellular ligand-gated ion channel activity"
evidence=IEA] [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0004890 "GABA-A receptor activity" evidence=IDA] [GO:0006811
"ion transport" evidence=IDA] InterPro:IPR006028 InterPro:IPR006029
InterPro:IPR006201 InterPro:IPR006202 InterPro:IPR018000
Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252 PRINTS:PR00253
PROSITE:PS00236 GO:GO:0016021 GO:GO:0005886 EMBL:AE014296
GO:GO:0030054 GO:GO:0045211 GO:GO:0004890 Gene3D:2.70.170.10
PANTHER:PTHR18945 SUPFAM:SSF90112 SUPFAM:SSF63712 GO:GO:0005261
GO:GO:0034707 GO:GO:0005254 eggNOG:NOG238757 EMBL:X78349 PIR:S60749
RefSeq:NP_524131.1 UniGene:Dm.2530 ProteinModelPortal:Q24352
SMR:Q24352 STRING:Q24352 PRIDE:Q24352 EnsemblMetazoa:FBtr0075139
GeneID:39984 KEGG:dme:Dmel_CG7446 CTD:39984 FlyBase:FBgn0001134
GeneTree:ENSGT00540000070314 InParanoid:Q24352 OMA:EVDIMVR
OrthoDB:EOG4W9GKJ PhylomeDB:Q24352 GenomeRNAi:39984 NextBio:816405
Bgee:Q24352 GermOnline:CG7446 GO:GO:0016933 Uniprot:Q24352
Length = 686
Score = 208 (78.3 bits), Expect = 8.2e-20, Sum P(2) = 8.2e-20
Identities = 44/105 (41%), Positives = 61/105 (58%)
Query: 100 YSSLTLTFILNRQYGFYLMDFYAPSILLVCISWVSFWMAPDAVPGRTILGASTMLTFFQL 159
YS L + F L R G +L+ Y P LLV +SWVSFW+ +A R LG +T+LT L
Sbjct: 378 YSMLMVNFHLQRHMGNFLIQVYGPCCLLVVLSWVSFWLNREATADRVSLGITTVLTMTFL 437
Query: 160 GIETGSSLPNVSYIRSNDVWFFACTVFIFLSLAEFAFVNTIWRYG 204
G+E + LP VSY + D + F FIF ++ +FA V+ +YG
Sbjct: 438 GLEARTDLPKVSYPTALDFFVFLSFGFIFATILQFAVVHYYTKYG 482
Score = 62 (26.9 bits), Expect = 8.2e-20, Sum P(2) = 8.2e-20
Identities = 17/66 (25%), Positives = 29/66 (43%)
Query: 29 WKDPRLEYRHYAPHITEMVGERNFIQNIWTPHIYLTNERDSLVLGLYRRDMLVSILPDGD 88
W D RL + + V + + IW P Y N + S + + + V I +G
Sbjct: 164 WVDKRLAFEGAQDTLALSV---SMLARIWKPDTYFYNGKQSYLHTITTPNKFVRIYQNGR 220
Query: 89 MLFSTR 94
+L+S+R
Sbjct: 221 VLYSSR 226
>WB|WBGene00018880 [details] [associations]
symbol:acc-3 species:6239 "Caenorhabditis elegans"
[GO:0006811 "ion transport" evidence=IEA] [GO:0016021 "integral to
membrane" evidence=IEA] [GO:0016020 "membrane" evidence=IEA]
[GO:0005230 "extracellular ligand-gated ion channel activity"
evidence=IEA] [GO:0006810 "transport" evidence=IEA] [GO:0045211
"postsynaptic membrane" evidence=IEA] InterPro:IPR006028
InterPro:IPR006029 InterPro:IPR006201 InterPro:IPR006202
InterPro:IPR018000 Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252
PRINTS:PR00253 PROSITE:PS00236 GO:GO:0016021 GO:GO:0005886
GO:GO:0030054 GO:GO:0045211 GO:GO:0005230 Gene3D:2.70.170.10
PANTHER:PTHR18945 SUPFAM:SSF90112 SUPFAM:SSF63712
TIGRFAMs:TIGR00860 GeneTree:ENSGT00540000070314 EMBL:FO080828
EMBL:AY849796 PIR:T16458 RefSeq:NP_508810.2 UniGene:Cel.25513
ProteinModelPortal:G5EDN0 SMR:G5EDN0 EnsemblMetazoa:F55D10.5
GeneID:186307 KEGG:cel:CELE_F55D10.5 CTD:186307 WormBase:F55D10.5
OMA:KMIPART NextBio:931382 Uniprot:G5EDN0
Length = 517
Score = 242 (90.2 bits), Expect = 9.4e-20, P = 9.4e-20
Identities = 50/136 (36%), Positives = 82/136 (60%)
Query: 72 LGLYRRDMLVSILPDGDML-FSTRSRAYMY-----SSLTLTFILNRQYGFYLMDFYAPSI 125
L L ++++ +LPD M +ST + +Y + LT+TF+ +R+YG+Y+ Y P+
Sbjct: 230 LSLLKKEI---VLPDFVMSNYSTSLKHEIYPAGVWNELTMTFVFSRRYGWYIFQAYIPTY 286
Query: 126 LLVCISWVSFWMAPDAVPGRTILGASTMLTF-FQLGIETGSSLPNVSYIRSNDVWFFACT 184
L + ISW+SF + P +P RT+LG +++L FQ G +LP VSY+++ DVW C
Sbjct: 287 LTIFISWISFCLGPKMIPARTMLGVNSLLALTFQFG-NIMRNLPRVSYVKALDVWMLVCL 345
Query: 185 VFIFLSLAEFAFVNTI 200
F+F SL E A + ++
Sbjct: 346 TFVFCSLLELAIIGSM 361
>UNIPROTKB|F1SNS4 [details] [associations]
symbol:LOC100739031 "Uncharacterized protein" species:9823
"Sus scrofa" [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0005216 "ion channel activity" evidence=IEA] [GO:0004890
"GABA-A receptor activity" evidence=IEA] InterPro:IPR002289
InterPro:IPR006028 InterPro:IPR006029 InterPro:IPR006201
Pfam:PF02932 PRINTS:PR00253 PRINTS:PR01160 GO:GO:0016021
GO:GO:0004890 PANTHER:PTHR18945 SUPFAM:SSF90112 GO:GO:0005216
GeneTree:ENSGT00630000089685 EMBL:CU915341
Ensembl:ENSSSCT00000024510 Ensembl:ENSSSCT00000030785 OMA:FATXITT
Uniprot:F1SNS4
Length = 248
Score = 233 (87.1 bits), Expect = 1.5e-19, P = 1.5e-19
Identities = 42/102 (41%), Positives = 65/102 (63%)
Query: 100 YSSLTLTFILNRQYGFYLMDFYAPSILLVCISWVSFWMAPDAVPGRTILGASTMLTFFQL 159
Y L+L+F L R G++++ Y PSIL+ +SWVSFW+ DA R LG +T+LT +
Sbjct: 7 YPRLSLSFRLKRNIGYFILQTYMPSILITILSWVSFWINYDASAARVALGITTVLTMTTI 66
Query: 160 GIETGSSLPNVSYIRSNDVWFFACTVFIFLSLAEFAFVNTIW 201
+LP + Y+++ D++ C VF+FL+L E+AFVN I+
Sbjct: 67 NTHLRETLPKIPYVKAIDMYLMGCFVFVFLALLEYAFVNYIF 108
>MGI|MGI:95622 [details] [associations]
symbol:Gabrd "gamma-aminobutyric acid (GABA) A receptor,
subunit delta" species:10090 "Mus musculus" [GO:0004890 "GABA-A
receptor activity" evidence=ISO] [GO:0005216 "ion channel activity"
evidence=IEA] [GO:0005230 "extracellular ligand-gated ion channel
activity" evidence=IEA] [GO:0005254 "chloride channel activity"
evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0006810 "transport" evidence=IEA] [GO:0006811 "ion transport"
evidence=IEA] [GO:0006821 "chloride transport" evidence=IEA]
[GO:0007268 "synaptic transmission" evidence=ISO] [GO:0016020
"membrane" evidence=IEA] [GO:0016021 "integral to membrane"
evidence=IEA] [GO:0030054 "cell junction" evidence=IEA] [GO:0034707
"chloride channel complex" evidence=IEA] [GO:0045202 "synapse"
evidence=IEA] [GO:0045211 "postsynaptic membrane" evidence=IEA]
InterPro:IPR006028 InterPro:IPR006029 InterPro:IPR006201
InterPro:IPR006202 InterPro:IPR008098 InterPro:IPR018000
Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252 PRINTS:PR00253
PRINTS:PR01722 PROSITE:PS00236 MGI:MGI:95622 GO:GO:0005886
GO:GO:0007268 GO:GO:0030054 GO:GO:0045211 GO:GO:0005230
GO:GO:0004890 Gene3D:2.70.170.10 PANTHER:PTHR18945 SUPFAM:SSF90112
SUPFAM:SSF63712 TIGRFAMs:TIGR00860 GO:GO:0034707 GO:GO:0005254
HOVERGEN:HBG051707 HOGENOM:HOG000231335 CTD:2563 eggNOG:NOG308574
KO:K05184 OMA:EYTMTVF OrthoDB:EOG4H9XKN EMBL:AH001900 EMBL:S42882
IPI:IPI00323796 PIR:A36303 PIR:I52630 RefSeq:NP_032098.2
UniGene:Mm.388925 ProteinModelPortal:P22933 SMR:P22933
STRING:P22933 PhosphoSite:P22933 PRIDE:P22933
Ensembl:ENSMUST00000030925 GeneID:14403 KEGG:mmu:14403
InParanoid:P22933 BindingDB:P22933 ChEMBL:CHEMBL3907 NextBio:285959
Bgee:P22933 Genevestigator:P22933 GermOnline:ENSMUSG00000029054
Uniprot:P22933
Length = 449
Score = 238 (88.8 bits), Expect = 1.7e-19, P = 1.7e-19
Identities = 47/102 (46%), Positives = 66/102 (64%)
Query: 97 AYMYSSLTLTFILNRQYGFYLMDFYAPSILLVCISWVSFWMAPDAVPGRTILGASTMLTF 156
A + L+L F L R G Y++ Y PS+LLV +SWVSFW++ AVP R LG +T+LT
Sbjct: 231 AGQFPRLSLHFQLRRNRGVYIIQSYMPSVLLVAMSWVSFWISQAAVPARVSLGITTVLTM 290
Query: 157 FQLGIETGSSLPNVSYIRSNDVWFFACTVFIFLSLAEFAFVN 198
L + SSLP S I++ DV+F+ C VF+F +L E+AF +
Sbjct: 291 TTLMVSARSSLPRASAIKALDVYFWICYVFVFAALVEYAFAH 332
>UNIPROTKB|P24045 [details] [associations]
symbol:GABRB4 "Gamma-aminobutyric acid receptor subunit
beta-4" species:9031 "Gallus gallus" [GO:0004890 "GABA-A receptor
activity" evidence=IEA] [GO:0005230 "extracellular ligand-gated ion
channel activity" evidence=IEA] [GO:0005254 "chloride channel
activity" evidence=IEA] [GO:0030054 "cell junction" evidence=IEA]
[GO:0034707 "chloride channel complex" evidence=IEA] [GO:0005886
"plasma membrane" evidence=IEA] [GO:0045211 "postsynaptic membrane"
evidence=IEA] InterPro:IPR002289 InterPro:IPR006028
InterPro:IPR006029 InterPro:IPR006201 InterPro:IPR006202
InterPro:IPR018000 Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252
PRINTS:PR00253 PRINTS:PR01160 PROSITE:PS00236 GO:GO:0005886
GO:GO:0030054 GO:GO:0045211 GO:GO:0005230 GO:GO:0004890
Gene3D:2.70.170.10 PANTHER:PTHR18945 SUPFAM:SSF90112
SUPFAM:SSF63712 TIGRFAMs:TIGR00860 GO:GO:0034707 GO:GO:0005254
HOVERGEN:HBG051707 eggNOG:NOG77438 GeneTree:ENSGT00630000089685
HOGENOM:HOG000231335 EMBL:X56647 EMBL:X56648 EMBL:X56646
IPI:IPI00571160 IPI:IPI00596309 PIR:JH0359 RefSeq:NP_001161175.1
RefSeq:NP_001161176.1 UniGene:Gga.428 ProteinModelPortal:P24045
SMR:P24045 PRIDE:P24045 Ensembl:ENSGALT00000011746 GeneID:396288
KEGG:gga:396288 CTD:55879 InParanoid:P24045 OMA:ANNERHR
OrthoDB:EOG40S0FS NextBio:20816339 Uniprot:P24045
Length = 488
Score = 239 (89.2 bits), Expect = 1.7e-19, P = 1.7e-19
Identities = 49/131 (37%), Positives = 79/131 (60%)
Query: 71 VLGLYRRDMLVSILPDGDMLFSTRSRAYMYSSLTLTFILNRQYGFYLMDFYAPSILLVCI 130
VL L + ++ L +++F+T S Y L+L+F + R G++++ Y PSIL+ +
Sbjct: 204 VLELPQFTIIEQRLVSREVVFTTGS----YLRLSLSFRIKRNIGYFILQTYMPSILITIL 259
Query: 131 SWVSFWMAPDAVPGRTILGASTMLTFFQLGIETGSSLPNVSYIRSNDVWFFACTVFIFLS 190
SWVSFW+ DA R LG +T+LT + +LP + Y+++ DV+ C VF+FL+
Sbjct: 260 SWVSFWINYDASAARVALGVTTVLTMTTINTHLRETLPKIPYVKAIDVYLMGCFVFVFLA 319
Query: 191 LAEFAFVNTIW 201
L E+AFVN I+
Sbjct: 320 LLEYAFVNYIF 330
>WB|WBGene00001593 [details] [associations]
symbol:glc-3 species:6239 "Caenorhabditis elegans"
[GO:0006811 "ion transport" evidence=IEA] [GO:0016021 "integral to
membrane" evidence=IEA] [GO:0016020 "membrane" evidence=IEA]
[GO:0005230 "extracellular ligand-gated ion channel activity"
evidence=IEA] [GO:0006810 "transport" evidence=IEA] [GO:0045211
"postsynaptic membrane" evidence=IEA] [GO:0031987 "locomotion
involved in locomotory behavior" evidence=IMP] InterPro:IPR006028
InterPro:IPR006029 InterPro:IPR006201 InterPro:IPR006202
InterPro:IPR007110 InterPro:IPR018000 Pfam:PF02931 Pfam:PF02932
PRINTS:PR00252 PRINTS:PR00253 PROSITE:PS00236 PROSITE:PS50835
GO:GO:0016021 GO:GO:0005886 GO:GO:0030054 GO:GO:0045211
GO:GO:0005230 Gene3D:2.70.170.10 PANTHER:PTHR18945 SUPFAM:SSF90112
SUPFAM:SSF63712 TIGRFAMs:TIGR00860 GO:GO:0031987
GeneTree:ENSGT00630000089685 HSSP:P23415 KO:K05273 EMBL:AJ243914
EMBL:FO081092 PIR:T29742 RefSeq:NP_504441.1 UniGene:Cel.18004
ProteinModelPortal:G5EEZ3 SMR:G5EEZ3 EnsemblMetazoa:ZC317.3
GeneID:178930 KEGG:cel:CELE_ZC317.3 CTD:178930 WormBase:ZC317.3
OMA:IPSTMLV NextBio:903170 Uniprot:G5EEZ3
Length = 484
Score = 238 (88.8 bits), Expect = 2.1e-19, P = 2.1e-19
Identities = 48/111 (43%), Positives = 65/111 (58%)
Query: 90 LFSTRSRAYMYSSLTLTFILNRQYGFYLMDFYAPSILLVCISWVSFWMAPDAVPGRTILG 149
L ++++ YS L L RQ+ +YL+ Y PS +LV +SWVSFW+ AVP R LG
Sbjct: 221 LCTSKTNTGTYSCLRTVLELRRQFSYYLLQLYIPSTMLVIVSWVSFWLDRGAVPARVTLG 280
Query: 150 ASTMLTFFQLGIETGSSLPNVSYIRSNDVWFFACTVFIFLSLAEFAFVNTI 200
+T+LT + LP VSY ++ DVW AC FIF +L EFA+V I
Sbjct: 281 VTTLLTMTTQASGINAKLPPVSYTKAIDVWIGACLTFIFGALLEFAWVTYI 331
>UNIPROTKB|F1NES7 [details] [associations]
symbol:LOC100858201 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0004890 "GABA-A receptor activity"
evidence=IEA] [GO:0005230 "extracellular ligand-gated ion channel
activity" evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0016021 "integral to membrane" evidence=IEA] [GO:0030054 "cell
junction" evidence=IEA] [GO:0045211 "postsynaptic membrane"
evidence=IEA] [GO:0007605 "sensory perception of sound"
evidence=IEA] [GO:0060119 "inner ear receptor cell development"
evidence=IEA] [GO:0060384 "innervation" evidence=IEA] [GO:0090102
"cochlea development" evidence=IEA] InterPro:IPR002289
InterPro:IPR006028 InterPro:IPR006029 InterPro:IPR006201
InterPro:IPR006202 InterPro:IPR018000 Pfam:PF02931 Pfam:PF02932
PRINTS:PR00252 PRINTS:PR00253 PRINTS:PR01160 PROSITE:PS00236
GO:GO:0016021 GO:GO:0005886 GO:GO:0030054 GO:GO:0045211
GO:GO:0005230 GO:GO:0004890 Gene3D:2.70.170.10 PANTHER:PTHR18945
SUPFAM:SSF90112 SUPFAM:SSF63712 TIGRFAMs:TIGR00860
GeneTree:ENSGT00630000089685 IPI:IPI00591128 OMA:FYAIYET
EMBL:AADN02017665 EMBL:AADN02017666 EMBL:AADN02017667
EMBL:AADN02017668 EMBL:AC145944 ProteinModelPortal:F1NES7
Ensembl:ENSGALT00000027029 ArrayExpress:F1NES7 Uniprot:F1NES7
Length = 478
Score = 237 (88.5 bits), Expect = 2.7e-19, P = 2.7e-19
Identities = 52/139 (37%), Positives = 83/139 (59%)
Query: 68 DSLVLGLYRRDM-LVSI----LPDGDMLFSTRSRAYMYSSLTLTFILNRQYGFYLMDFYA 122
D+ V G+ R ++ SI L +++F+T AY L+L+F L R G++++ Y
Sbjct: 197 DNAVTGVERIELPQFSIVEYRLVSKNVVFATGKCAY--PRLSLSFRLKRNIGYFILQTYM 254
Query: 123 PSILLVCISWVSFWMAPDAVPGRTILGASTMLTFFQLGIETGSSLPNVSYIRSNDVWFFA 182
PSIL+ +SWVSFW+ DA R LG +T+LT + +LP + Y+++ D++
Sbjct: 255 PSILITILSWVSFWINYDASAARVALGITTVLTMTTINTHLRETLPKIPYVKAIDMYLMG 314
Query: 183 CTVFIFLSLAEFAFVNTIW 201
C VF+FL+L E+AFVN I+
Sbjct: 315 CFVFVFLALLEYAFVNYIF 333
>WB|WBGene00017389 [details] [associations]
symbol:lgc-38 species:6239 "Caenorhabditis elegans"
[GO:0004890 "GABA-A receptor activity" evidence=IEA] [GO:0005216
"ion channel activity" evidence=IEA] [GO:0006811 "ion transport"
evidence=IEA] [GO:0016020 "membrane" evidence=IEA] [GO:0016021
"integral to membrane" evidence=IEA] [GO:0005230 "extracellular
ligand-gated ion channel activity" evidence=IEA] [GO:0006810
"transport" evidence=IEA] [GO:0045211 "postsynaptic membrane"
evidence=IEA] InterPro:IPR001390 InterPro:IPR006028
InterPro:IPR006029 InterPro:IPR006201 InterPro:IPR006202
InterPro:IPR018000 Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252
PRINTS:PR00253 PRINTS:PR01079 PROSITE:PS00236 GO:GO:0016021
GO:GO:0005886 GO:GO:0030054 GO:GO:0045211 GO:GO:0005230
GO:GO:0004890 Gene3D:2.70.170.10 PANTHER:PTHR18945 SUPFAM:SSF90112
SUPFAM:SSF63712 TIGRFAMs:TIGR00860 EMBL:FO080391
GeneTree:ENSGT00630000089685 HSSP:P23415 eggNOG:NOG265706 KO:K05195
HOGENOM:HOG000231336 PIR:T16035 RefSeq:NP_498532.3
ProteinModelPortal:Q19358 SMR:Q19358 PaxDb:Q19358
EnsemblMetazoa:F11H8.2 GeneID:3565717 KEGG:cel:CELE_F11H8.2
UCSC:F11H8.2 CTD:3565717 WormBase:F11H8.2 InParanoid:Q19358
OMA:RESIIEP NextBio:957591 Uniprot:Q19358
Length = 459
Score = 236 (88.1 bits), Expect = 3.0e-19, P = 3.0e-19
Identities = 46/103 (44%), Positives = 63/103 (61%)
Query: 100 YSSLTLTFILNRQYGFYLMDFYAPSILLVCISWVSFWMAPDAVPGRTILGASTMLTFFQL 159
YS LT F+ R GFYL+ Y PS L+V ISWVSFW+ +AV R +G +T+LT L
Sbjct: 244 YSRLTAYFLFKRNIGFYLIQIYFPSSLIVVISWVSFWLNREAVQARVAIGVTTVLTMTTL 303
Query: 160 GIETGSSLPNVSYIRSNDVWFFACTVFIFLSLAEFAFVNTIWR 202
T +SLP VSY++S DV+ C +F SL E+A + + +
Sbjct: 304 MTSTNASLPKVSYVKSLDVFLGVCFFIVFASLLEYAAIGYLMK 346
>UNIPROTKB|I3LHK1 [details] [associations]
symbol:GABRB1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0005886 "plasma membrane" evidence=IEA] [GO:0005230
"extracellular ligand-gated ion channel activity" evidence=IEA]
[GO:0004890 "GABA-A receptor activity" evidence=IEA]
InterPro:IPR002289 InterPro:IPR006028 InterPro:IPR006029
InterPro:IPR006201 InterPro:IPR006202 Pfam:PF02932 PRINTS:PR00253
PRINTS:PR01160 GO:GO:0016021 GO:GO:0005886 GO:GO:0005230
GO:GO:0004890 Gene3D:2.70.170.10 PANTHER:PTHR18945 SUPFAM:SSF90112
SUPFAM:SSF63712 TIGRFAMs:TIGR00860 GeneTree:ENSGT00630000089685
OMA:YRKPMSS EMBL:CU469276 EMBL:FP236605 Ensembl:ENSSSCT00000025719
Uniprot:I3LHK1
Length = 301
Score = 230 (86.0 bits), Expect = 3.1e-19, P = 3.1e-19
Identities = 41/102 (40%), Positives = 64/102 (62%)
Query: 100 YSSLTLTFILNRQYGFYLMDFYAPSILLVCISWVSFWMAPDAVPGRTILGASTMLTFFQL 159
Y L+L+F L R G++++ Y PS L+ +SWVSFW+ DA R LG +T+LT +
Sbjct: 57 YPRLSLSFRLKRNIGYFILQTYMPSTLITILSWVSFWINYDASAARVALGITTVLTMTTI 116
Query: 160 GIETGSSLPNVSYIRSNDVWFFACTVFIFLSLAEFAFVNTIW 201
+LP + Y+++ D++ C VF+FL+L E+AFVN I+
Sbjct: 117 STHLRETLPKIPYVKAIDIYLMGCFVFVFLALLEYAFVNYIF 158
>WB|WBGene00000233 [details] [associations]
symbol:avr-15 species:6239 "Caenorhabditis elegans"
[GO:0006811 "ion transport" evidence=IEA] [GO:0016021 "integral to
membrane" evidence=IEA] [GO:0016020 "membrane" evidence=IEA]
[GO:0005230 "extracellular ligand-gated ion channel activity"
evidence=IEA] [GO:0006810 "transport" evidence=IEA] [GO:0045211
"postsynaptic membrane" evidence=IEA] [GO:0043051 "regulation of
pharyngeal pumping" evidence=IGI;IMP] [GO:0001508 "regulation of
action potential" evidence=IMP] [GO:0031987 "locomotion involved in
locomotory behavior" evidence=IGI;IMP] InterPro:IPR006028
InterPro:IPR006029 InterPro:IPR006201 InterPro:IPR006202
InterPro:IPR018000 Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252
PRINTS:PR00253 PROSITE:PS00236 GO:GO:0016021 GO:GO:0005886
GO:GO:0030054 GO:GO:0045211 GO:GO:0005230 Gene3D:2.70.170.10
PANTHER:PTHR18945 SUPFAM:SSF90112 SUPFAM:SSF63712
TIGRFAMs:TIGR00860 GO:GO:0043051 GO:GO:0001508 GO:GO:0031987
GeneTree:ENSGT00630000089685 HSSP:P23415 KO:K05273 EMBL:Z77668
EMBL:Z81118 CTD:179834 RefSeq:NP_001024076.1
ProteinModelPortal:G5ECH3 SMR:G5ECH3 PRIDE:G5ECH3
EnsemblMetazoa:R11G10.1a GeneID:179834 KEGG:cel:CELE_R11G10.1
WormBase:R11G10.1a OMA:NISYWTH NextBio:907054 Uniprot:G5ECH3
Length = 657
Score = 239 (89.2 bits), Expect = 3.5e-19, P = 3.5e-19
Identities = 47/109 (43%), Positives = 65/109 (59%)
Query: 92 STRSRAYMYSSLTLTFILNRQYGFYLMDFYAPSILLVCISWVSFWMAPDAVPGRTILGAS 151
++++ YS L L RQ+ +YL+ Y PS +LV +SWVSFW+ AVP R LG +
Sbjct: 445 TSKTNTGSYSCLRTIIQLRRQFSYYLLQLYIPSCMLVIVSWVSFWIDRTAVPARVTLGVT 504
Query: 152 TMLTFFQLGIETGSSLPNVSYIRSNDVWFFACTVFIFLSLAEFAFVNTI 200
T+LT + LP V+YI++ DVW AC FIF +L EFA+V I
Sbjct: 505 TLLTMTTQSSGINAKLPPVAYIKAIDVWIGACMTFIFCALLEFAWVTYI 553
>FB|FBgn0010240 [details] [associations]
symbol:Lcch3 "Ligand-gated chloride channel homolog 3"
species:7227 "Drosophila melanogaster" [GO:0005886 "plasma
membrane" evidence=IDA] [GO:0004890 "GABA-A receptor activity"
evidence=NAS;IDA] [GO:0016021 "integral to membrane"
evidence=IEA;NAS] [GO:0006811 "ion transport" evidence=IEA]
[GO:0005230 "extracellular ligand-gated ion channel activity"
evidence=IEA] [GO:0045211 "postsynaptic membrane" evidence=IEA]
InterPro:IPR002289 InterPro:IPR006028 InterPro:IPR006029
InterPro:IPR006201 InterPro:IPR006202 InterPro:IPR018000
Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252 PRINTS:PR00253
PRINTS:PR01160 PROSITE:PS00236 GO:GO:0005886 GO:GO:0030054
GO:GO:0045211 GO:GO:0005230 GO:GO:0004890 Gene3D:2.70.170.10
PANTHER:PTHR18945 SUPFAM:SSF90112 SUPFAM:SSF63712
TIGRFAMs:TIGR00860 EMBL:AE014298 GO:GO:0034707 GO:GO:0005254
eggNOG:NOG77438 GeneTree:ENSGT00630000089685 KO:K05181 EMBL:L17436
EMBL:S62717 EMBL:AY060660 PIR:JN0603 RefSeq:NP_996469.1
UniGene:Dm.6661 ProteinModelPortal:Q08832 SMR:Q08832 STRING:Q08832
EnsemblMetazoa:FBtr0074129 GeneID:32554 KEGG:dme:Dmel_CG17336
CTD:32554 FlyBase:FBgn0010240 InParanoid:Q08832 OMA:ERSETCS
OrthoDB:EOG444J1S PhylomeDB:Q08832 ChiTaRS:Lcch3 GenomeRNAi:32554
NextBio:779108 Bgee:Q08832 GermOnline:CG17336 Uniprot:Q08832
Length = 496
Score = 236 (88.1 bits), Expect = 3.8e-19, P = 3.8e-19
Identities = 44/104 (42%), Positives = 66/104 (63%)
Query: 99 MYSSLTLTFILNRQYGFYLMDFYAPSILLVCISWVSFWMAPDAVPGRTILGASTMLTFFQ 158
+Y L+L+F L R G+++ Y PSIL+V +SWVSFW+ +A R LG +T+LT
Sbjct: 242 VYQRLSLSFKLQRNIGYFVFQTYLPSILIVMLSWVSFWINHEATSARVALGITTVLTMTT 301
Query: 159 LGIETGSSLPNVSYIRSNDVWFFACTVFIFLSLAEFAFVN-TIW 201
+ SSLP +SY+++ D++ C VF+F +L E+A VN T W
Sbjct: 302 ISTGVRSSLPRISYVKAIDIYLVMCFVFVFAALLEYAAVNYTYW 345
>UNIPROTKB|F1PKC7 [details] [associations]
symbol:GABRB2 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0005886 "plasma membrane" evidence=IEA] [GO:0005230
"extracellular ligand-gated ion channel activity" evidence=IEA]
[GO:0004890 "GABA-A receptor activity" evidence=IEA]
InterPro:IPR002289 InterPro:IPR006028 InterPro:IPR006029
InterPro:IPR006201 InterPro:IPR006202 Pfam:PF02932 PRINTS:PR00253
PRINTS:PR01160 GO:GO:0016021 GO:GO:0005886 GO:GO:0005230
GO:GO:0004890 Gene3D:2.70.170.10 PANTHER:PTHR18945 SUPFAM:SSF90112
SUPFAM:SSF63712 TIGRFAMs:TIGR00860 GeneTree:ENSGT00630000089685
EMBL:AAEX03003043 EMBL:AAEX03003044 EMBL:AAEX03003045
Ensembl:ENSCAFT00000027322 Uniprot:F1PKC7
Length = 314
Score = 229 (85.7 bits), Expect = 4.0e-19, P = 4.0e-19
Identities = 44/113 (38%), Positives = 70/113 (61%)
Query: 89 MLFSTRSRAYMYSSLTLTFILNRQYGFYLMDFYAPSILLVCISWVSFWMAPDAVPGRTIL 148
++FST S Y L+L+F L R G++++ Y PSIL+ +SWVSFW+ DA R L
Sbjct: 62 VVFSTGS----YPRLSLSFKLKRNIGYFILQTYMPSILITILSWVSFWINYDASAARVAL 117
Query: 149 GASTMLTFFQLGIETGSSLPNVSYIRSNDVWFFACTVFIFLSLAEFAFVNTIW 201
G +T+LT + +LP + Y+++ D++ C VF+F++L E+A VN I+
Sbjct: 118 GITTVLTMTTINTHLRETLPKIPYVKAIDMYLMGCFVFVFMALLEYALVNYIF 170
>UNIPROTKB|B7Z279 [details] [associations]
symbol:GABRB2 "Gamma-aminobutyric acid receptor subunit
beta-2" species:9606 "Homo sapiens" [GO:0004890 "GABA-A receptor
activity" evidence=IEA] [GO:0005230 "extracellular ligand-gated ion
channel activity" evidence=IEA] [GO:0005886 "plasma membrane"
evidence=IEA] [GO:0016021 "integral to membrane" evidence=IEA]
InterPro:IPR002289 InterPro:IPR006028 InterPro:IPR006029
InterPro:IPR006201 InterPro:IPR006202 Pfam:PF02931 Pfam:PF02932
PRINTS:PR00253 PRINTS:PR01160 GO:GO:0016021 GO:GO:0005886
GO:GO:0005230 GO:GO:0004890 Gene3D:2.70.170.10 PANTHER:PTHR18945
SUPFAM:SSF90112 SUPFAM:SSF63712 TIGRFAMs:TIGR00860
HOVERGEN:HBG051707 HOGENOM:HOG000231335 OrthoDB:EOG45756F
UniGene:Hs.303527 HGNC:HGNC:4082 EMBL:AC008712 EMBL:AC022120
EMBL:AC091882 EMBL:AC091989 EMBL:AK294437 IPI:IPI00975760
SMR:B7Z279 STRING:B7Z279 Ensembl:ENST00000517547 UCSC:uc011deh.1
Uniprot:B7Z279
Length = 314
Score = 229 (85.7 bits), Expect = 4.0e-19, P = 4.0e-19
Identities = 44/113 (38%), Positives = 70/113 (61%)
Query: 89 MLFSTRSRAYMYSSLTLTFILNRQYGFYLMDFYAPSILLVCISWVSFWMAPDAVPGRTIL 148
++FST S Y L+L+F L R G++++ Y PSIL+ +SWVSFW+ DA R L
Sbjct: 62 VVFSTGS----YPRLSLSFKLKRNIGYFILQTYMPSILITILSWVSFWINYDASAARVAL 117
Query: 149 GASTMLTFFQLGIETGSSLPNVSYIRSNDVWFFACTVFIFLSLAEFAFVNTIW 201
G +T+LT + +LP + Y+++ D++ C VF+F++L E+A VN I+
Sbjct: 118 GITTVLTMTTINTHLRETLPKIPYVKAIDMYLMGCFVFVFMALLEYALVNYIF 170
>UNIPROTKB|F1RR58 [details] [associations]
symbol:GABRB2 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0090102 "cochlea development" evidence=IEA] [GO:0060384
"innervation" evidence=IEA] [GO:0060119 "inner ear receptor cell
development" evidence=IEA] [GO:0007605 "sensory perception of
sound" evidence=IEA] [GO:0016021 "integral to membrane"
evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0005230 "extracellular ligand-gated ion channel activity"
evidence=IEA] [GO:0004890 "GABA-A receptor activity" evidence=IEA]
InterPro:IPR002289 InterPro:IPR006028 InterPro:IPR006029
InterPro:IPR006201 InterPro:IPR006202 Pfam:PF02932 PRINTS:PR00253
PRINTS:PR01160 GO:GO:0016021 GO:GO:0005886 GO:GO:0005230
GO:GO:0004890 Gene3D:2.70.170.10 PANTHER:PTHR18945 SUPFAM:SSF90112
SUPFAM:SSF63712 TIGRFAMs:TIGR00860 GO:GO:0007605 GO:GO:0090102
GO:GO:0060119 GO:GO:0060384 GeneTree:ENSGT00630000089685
EMBL:CU469233 Ensembl:ENSSSCT00000018541 OMA:DAANIQY Uniprot:F1RR58
Length = 314
Score = 229 (85.7 bits), Expect = 4.0e-19, P = 4.0e-19
Identities = 44/113 (38%), Positives = 70/113 (61%)
Query: 89 MLFSTRSRAYMYSSLTLTFILNRQYGFYLMDFYAPSILLVCISWVSFWMAPDAVPGRTIL 148
++FST S Y L+L+F L R G++++ Y PSIL+ +SWVSFW+ DA R L
Sbjct: 62 VVFSTGS----YPRLSLSFKLKRNIGYFILQTYMPSILITILSWVSFWINYDASAARVAL 117
Query: 149 GASTMLTFFQLGIETGSSLPNVSYIRSNDVWFFACTVFIFLSLAEFAFVNTIW 201
G +T+LT + +LP + Y+++ D++ C VF+F++L E+A VN I+
Sbjct: 118 GITTVLTMTTINTHLRETLPKIPYVKAIDMYLMGCFVFVFMALLEYALVNYIF 170
>WB|WBGene00020767 [details] [associations]
symbol:lgc-40 species:6239 "Caenorhabditis elegans"
[GO:0006811 "ion transport" evidence=IEA] [GO:0016021 "integral to
membrane" evidence=IEA] [GO:0016020 "membrane" evidence=IEA]
[GO:0005230 "extracellular ligand-gated ion channel activity"
evidence=IEA] [GO:0006810 "transport" evidence=IEA] [GO:0045211
"postsynaptic membrane" evidence=IEA] InterPro:IPR006028
InterPro:IPR006029 InterPro:IPR006201 InterPro:IPR006202
InterPro:IPR018000 Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252
PRINTS:PR00253 PROSITE:PS00236 GO:GO:0016021 GO:GO:0005886
GO:GO:0030054 GO:GO:0045211 GO:GO:0005230 Gene3D:2.70.170.10
PANTHER:PTHR18945 SUPFAM:SSF90112 SUPFAM:SSF63712
TIGRFAMs:TIGR00860 GeneTree:ENSGT00540000070314 HSSP:P23415
HOGENOM:HOG000231336 KO:K05397 EMBL:FO081414 PIR:T16935
RefSeq:NP_508428.2 ProteinModelPortal:Q22741 SMR:Q22741
IntAct:Q22741 MINT:MINT-214095 TCDB:1.A.9.6.4 PaxDb:Q22741
EnsemblMetazoa:T24D8.1 GeneID:188854 KEGG:cel:CELE_T24D8.1
UCSC:T24D8.1 CTD:188854 WormBase:T24D8.1 eggNOG:NOG328391
InParanoid:Q22741 OMA:VISWFNF NextBio:940332 Uniprot:Q22741
Length = 494
Score = 181 (68.8 bits), Expect = 4.4e-19, Sum P(2) = 4.4e-19
Identities = 34/95 (35%), Positives = 54/95 (56%)
Query: 100 YSSLTLTFILNRQYGFYLMDFYAPSILLVCISWVSFWMAPDAVPGRTILGASTMLTFFQL 159
+S +T F + R+ ++M Y P+ L+V ISW +FW+ D+ P R L +T+LT
Sbjct: 229 WSCMTAIFYVEREMMHHVMQTYVPTALIVVISWFNFWLEIDSAPARVSLSITTLLTISTQ 288
Query: 160 GIETGSSLPNVSYIRSNDVWFFACTVFIFLSLAEF 194
+LP VSY+++ DVW +C F+F + EF
Sbjct: 289 ANAVKLALPEVSYMKAIDVWMGSCMAFVFGVMIEF 323
Score = 78 (32.5 bits), Expect = 4.4e-19, Sum P(2) = 4.4e-19
Identities = 18/77 (23%), Positives = 35/77 (45%)
Query: 18 EFKVQLLLQLHWKDPRLEYRHYAPHITEMVGERNFIQNIWTPHIYLTNERDSLVLGLYRR 77
++ + + Q W D RL + AP + V + + +W P +Y N R + +
Sbjct: 78 DYHLDVYFQEEWYDHRLAHNASAPIL---VRDLTVFKMMWHPDVYFANARSAAFQDITDD 134
Query: 78 DMLVSILPDGDMLFSTR 94
+ LV + P+G + + R
Sbjct: 135 NFLVWVYPNGRVWYDAR 151
>WB|WBGene00001588 [details] [associations]
symbol:ggr-3 species:6239 "Caenorhabditis elegans"
[GO:0006811 "ion transport" evidence=IEA] [GO:0016021 "integral to
membrane" evidence=IEA] [GO:0016020 "membrane" evidence=IEA]
[GO:0005230 "extracellular ligand-gated ion channel activity"
evidence=IEA] [GO:0006810 "transport" evidence=IEA] [GO:0045211
"postsynaptic membrane" evidence=IEA] InterPro:IPR006028
InterPro:IPR006029 InterPro:IPR006201 InterPro:IPR006202
InterPro:IPR018000 Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252
PRINTS:PR00253 PROSITE:PS00236 GO:GO:0016021 GO:GO:0005886
GO:GO:0030054 GO:GO:0045211 GO:GO:0005230 Gene3D:2.70.170.10
PANTHER:PTHR18945 SUPFAM:SSF90112 SUPFAM:SSF63712
GeneTree:ENSGT00540000070314 HOGENOM:HOG000016259 EMBL:FO080348
RefSeq:NP_494951.3 ProteinModelPortal:Q10052 SMR:Q10052
EnsemblMetazoa:F09C12.1 GeneID:191638 KEGG:cel:CELE_F09C12.1
UCSC:F09C12.1 CTD:191638 WormBase:F09C12.1 eggNOG:NOG264840
OMA:SFIADVW NextBio:949776 Uniprot:Q10052
Length = 445
Score = 234 (87.4 bits), Expect = 4.5e-19, P = 4.5e-19
Identities = 45/110 (40%), Positives = 65/110 (59%)
Query: 92 STRSRAYMYSSLTLTFILNRQYGFYLMDFYAPSILLVCISWVSFWMAPDAVPGRTILGAS 151
S A M+ L +TF R YG+Y++ Y P+ L V ISW++FW+ A+P R LG S
Sbjct: 222 SNEYTAGMWDQLKVTFRFKRLYGYYVLQMYLPTYLSVFISWIAFWIDTRALPARITLGVS 281
Query: 152 TMLTF-FQLGIETGSSLPNVSYIRSNDVWFFACTVFIFLSLAEFAFVNTI 200
+++ FQ G +LP VS++++ D+WFF C FIF SL E A V +
Sbjct: 282 SLMALTFQFG-NIVKNLPRVSFVKAIDLWFFVCVAFIFFSLVELAVVGFV 330
Score = 113 (44.8 bits), Expect = 0.00034, P = 0.00034
Identities = 35/137 (25%), Positives = 65/137 (47%)
Query: 9 DIGNLS-FQQEFKVQLLLQLHWKDPRLEYRHYAPHITEMVGERNFIQNIWTPHIYLTNER 67
DI ++S F + W DPRLEYR+ + T + + + +WTP++ N +
Sbjct: 68 DISSISEISSSFIADVWFSQVWYDPRLEYRNISCK-TNLSLDSYVSERLWTPNVCFVNSK 126
Query: 68 DSLVLGLYRRDMLVSILPDGDMLFSTRSRAYMYSSLTLT-FILNRQYGFYLMDFYAPSIL 126
+ V ++L+ I P+G + + R + S L+ F ++ Q + + Y+ +I
Sbjct: 127 STQVHKSPASNILLIIYPNGTVWLNYRVQVSAPCSFELSRFPIDAQECHLVFESYSYNIA 186
Query: 127 LVCISWVSFWMAPDAVP 143
V ++W W AP +P
Sbjct: 187 EVRLNWQQ-W-APVTMP 201
>WB|WBGene00017314 [details] [associations]
symbol:lgc-39 species:6239 "Caenorhabditis elegans"
[GO:0006811 "ion transport" evidence=IEA] [GO:0016021 "integral to
membrane" evidence=IEA] [GO:0016020 "membrane" evidence=IEA]
[GO:0005230 "extracellular ligand-gated ion channel activity"
evidence=IEA] [GO:0006810 "transport" evidence=IEA] [GO:0045211
"postsynaptic membrane" evidence=IEA] InterPro:IPR006028
InterPro:IPR006029 InterPro:IPR006201 InterPro:IPR006202
InterPro:IPR018000 Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252
PRINTS:PR00253 PROSITE:PS00236 GO:GO:0016021 GO:GO:0005886
GO:GO:0030054 GO:GO:0045211 GO:GO:0005230 Gene3D:2.70.170.10
PANTHER:PTHR18945 SUPFAM:SSF90112 SUPFAM:SSF63712
TIGRFAMs:TIGR00860 EMBL:FO080529 GeneTree:ENSGT00540000070314
PIR:T32486 RefSeq:NP_504821.3 ProteinModelPortal:O17402 SMR:O17402
IntAct:O17402 EnsemblMetazoa:F09G2.5 GeneID:184265
KEGG:cel:CELE_F09G2.5 UCSC:F09G2.5 CTD:184265 WormBase:F09G2.5
eggNOG:NOG274676 HOGENOM:HOG000021541 InParanoid:O17402 OMA:LAHNCTH
NextBio:924130 Uniprot:O17402
Length = 563
Score = 173 (66.0 bits), Expect = 4.7e-19, Sum P(2) = 4.7e-19
Identities = 34/91 (37%), Positives = 53/91 (58%)
Query: 108 ILNRQYGFYLMDFYAPSILLVCISWVSFWMAPDAVPGRTILGASTMLTFFQLGIETGSSL 167
++ R F+++ Y P+ +LV ISW+SFW+ P A P R L +++LT + L
Sbjct: 331 VMKRLVLFHIIQTYIPTGMLVSISWMSFWLDPRASPARISLTITSLLTLTTMSNGARQDL 390
Query: 168 PNVSYIRSNDVWFFACTVFIFLSLAEFAFVN 198
P VSYI++ D+W IFL L E++FV+
Sbjct: 391 PQVSYIKALDIWLTFSQALIFLVLLEYSFVS 421
Score = 88 (36.0 bits), Expect = 4.7e-19, Sum P(2) = 4.7e-19
Identities = 21/76 (27%), Positives = 38/76 (50%)
Query: 18 EFKVQLLLQLHWKDPRLEYRHYAPHITEMVGERNFIQNIWTPHIYLTNERDSLVLGLYRR 77
+F+V + L + W D RL H H +V + IW P +Y N + + + +
Sbjct: 168 DFEVDMYLAMGWFDRRLA--HNCTHPI-LVTSKLIADRIWYPDLYFVNSKYAYLQEVTTP 224
Query: 78 DMLVSILPDGDMLFST 93
+++V + PDG ++F T
Sbjct: 225 NLMVIVYPDG-LIFKT 239
>FB|FBgn0024963 [details] [associations]
symbol:GluClalpha "GluClalpha" species:7227 "Drosophila
melanogaster" [GO:0008068 "extracellular-glutamate-gated chloride
channel activity" evidence=NAS;IDA] [GO:0045211 "postsynaptic
membrane" evidence=IEA] [GO:0006811 "ion transport" evidence=IEA]
[GO:0016021 "integral to membrane" evidence=IEA] [GO:0048812
"neuron projection morphogenesis" evidence=IMP] [GO:0005886 "plasma
membrane" evidence=IDA] InterPro:IPR006028 InterPro:IPR006029
InterPro:IPR006201 InterPro:IPR006202 InterPro:IPR018000
Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252 PRINTS:PR00253
PROSITE:PS00236 EMBL:AE014297 GO:GO:0016021 GO:GO:0005886
GO:GO:0030054 GO:GO:0045211 Gene3D:2.70.170.10 PANTHER:PTHR18945
SUPFAM:SSF90112 SUPFAM:SSF63712 TIGRFAMs:TIGR00860 GO:GO:0034707
eggNOG:NOG265706 KO:K05273 EMBL:U58776 EMBL:AJ002232 EMBL:AF297500
EMBL:AF297501 EMBL:DQ665648 RefSeq:NP_001014641.1
RefSeq:NP_001034061.1 RefSeq:NP_650827.2 RefSeq:NP_732447.1
UniGene:Dm.20644 ProteinModelPortal:Q94900 SMR:Q94900
MINT:MINT-813042 STRING:Q94900 TCDB:1.A.9.4.1 PaxDb:Q94900
GeneID:42350 KEGG:dme:Dmel_CG7535 UCSC:CG7535-RA CTD:42350
FlyBase:FBgn0024963 InParanoid:Q94900 OrthoDB:EOG42BVQV
GenomeRNAi:42350 NextBio:828361 Bgee:Q94900 GermOnline:CG7535
GO:GO:0008068 InterPro:IPR015680 PANTHER:PTHR18945:SF26
Uniprot:Q94900
Length = 456
Score = 234 (87.4 bits), Expect = 4.9e-19, P = 4.9e-19
Identities = 56/153 (36%), Positives = 81/153 (52%)
Query: 57 WTPH--IYLTNERD--SLVLGLYR-RDMLVSILPDGDMLFSTRSRAYMYSSLTLTFILNR 111
WT + ++L E D +V L+ R L L D ++++ YS L + + R
Sbjct: 186 WTTNDLVFLWKEGDPVQVVKNLHLPRFTLEKFLTD---YCNSKTNTGEYSCLKVDLLFKR 242
Query: 112 QYGFYLMDFYAPSILLVCISWVSFWMAPDAVPGRTILGASTMLTFFQLGIETGSSLPNVS 171
++ +YL+ Y P +LV +SWVSFW+ AVP R LG +T+LT +SLP VS
Sbjct: 243 EFSYYLIQIYIPCCMLVIVSWVSFWLDQGAVPARVSLGVTTLLTMATQTSGINASLPPVS 302
Query: 172 YIRSNDVWFFACTVFIFLSLAEFAFVNTIWRYG 204
Y ++ DVW C F+F +L EFA VN R G
Sbjct: 303 YTKAIDVWTGVCLTFVFGALLEFALVNYASRSG 335
>ZFIN|ZDB-GENE-070424-211 [details] [associations]
symbol:si:dkey-169l5.3 "si:dkey-169l5.3"
species:7955 "Danio rerio" [GO:0045211 "postsynaptic membrane"
evidence=IEA] [GO:0005230 "extracellular ligand-gated ion channel
activity" evidence=IEA] [GO:0006811 "ion transport" evidence=IEA]
[GO:0016020 "membrane" evidence=IEA] [GO:0016021 "integral to
membrane" evidence=IEA] [GO:0004890 "GABA-A receptor activity"
evidence=IEA] [GO:0005216 "ion channel activity" evidence=IEA]
[GO:0006810 "transport" evidence=IEA] [GO:0045202 "synapse"
evidence=IEA] [GO:0030054 "cell junction" evidence=IEA] [GO:0005886
"plasma membrane" evidence=IEA] InterPro:IPR002289
InterPro:IPR006028 InterPro:IPR006029 InterPro:IPR006201
InterPro:IPR006202 InterPro:IPR018000 Pfam:PF02931 Pfam:PF02932
PRINTS:PR00252 PRINTS:PR00253 PRINTS:PR01160 PROSITE:PS00236
ZFIN:ZDB-GENE-070424-211 GO:GO:0016021 GO:GO:0005886 GO:GO:0030054
GO:GO:0045211 GO:GO:0005230 GO:GO:0004890 Gene3D:2.70.170.10
PANTHER:PTHR18945 SUPFAM:SSF90112 SUPFAM:SSF63712
TIGRFAMs:TIGR00860 GeneTree:ENSGT00630000089685 EMBL:CABZ01006845
EMBL:CABZ01006846 EMBL:CABZ01006847 EMBL:CABZ01006848
EMBL:CABZ01006849 EMBL:CABZ01006850 EMBL:CABZ01006851
EMBL:CABZ01006852 EMBL:CABZ01006853 EMBL:CABZ01006854
EMBL:CABZ01006855 EMBL:CR932985 IPI:IPI00934600
Ensembl:ENSDART00000064718 Uniprot:F1Q4Y6
Length = 512
Score = 235 (87.8 bits), Expect = 5.3e-19, P = 5.3e-19
Identities = 49/139 (35%), Positives = 83/139 (59%)
Query: 68 DSLVLGLYRRDM----LVSI-LPDGDMLFSTRSRAYMYSSLTLTFILNRQYGFYLMDFYA 122
D+ V G+ + ++ +V + L ++ F+T S Y L+L+F + R G++++ Y
Sbjct: 198 DNAVTGVDKLELPQFSIVELRLVSREVRFTTGS----YPRLSLSFRIKRNIGYFILQTYM 253
Query: 123 PSILLVCISWVSFWMAPDAVPGRTILGASTMLTFFQLGIETGSSLPNVSYIRSNDVWFFA 182
PSIL+ +SWVSFW+ DA R LG +T+LT + +LP + Y+++ DV+
Sbjct: 254 PSILITILSWVSFWINYDASAARVALGVTTVLTMTTINTHLRETLPKIPYVKAIDVYLMG 313
Query: 183 CTVFIFLSLAEFAFVNTIW 201
C VF+FL+L E+AFVN ++
Sbjct: 314 CFVFVFLALLEYAFVNYVF 332
>UNIPROTKB|H0YJP1 [details] [associations]
symbol:GABRG3 "Gamma-aminobutyric acid receptor subunit
gamma-3" species:9606 "Homo sapiens" [GO:0005230 "extracellular
ligand-gated ion channel activity" evidence=IEA] [GO:0005886
"plasma membrane" evidence=IEA] [GO:0016021 "integral to membrane"
evidence=IEA] [GO:0030054 "cell junction" evidence=IEA] [GO:0045211
"postsynaptic membrane" evidence=IEA] InterPro:IPR006028
InterPro:IPR006029 InterPro:IPR006201 InterPro:IPR006202
InterPro:IPR018000 Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252
PRINTS:PR00253 PROSITE:PS00236 GO:GO:0016021 GO:GO:0005886
GO:GO:0030054 GO:GO:0045211 GO:GO:0005230 Gene3D:2.70.170.10
PANTHER:PTHR18945 SUPFAM:SSF90112 SUPFAM:SSF63712 HGNC:HGNC:4088
EMBL:AC127511 EMBL:AC104002 EMBL:AC135326 EMBL:AC136896
EMBL:AC144833 EMBL:AC145436 EMBL:EU606049 Ensembl:ENST00000554696
Bgee:H0YJP1 Uniprot:H0YJP1
Length = 258
Score = 175 (66.7 bits), Expect = 8.1e-19, Sum P(2) = 8.1e-19
Identities = 34/74 (45%), Positives = 46/74 (62%)
Query: 100 YSSLTLTFILNRQYGFYLMDFYAPSILLVCISWVSFWMAPDAVPGRTILGASTMLTFFQL 159
Y +T+ F L+R+ G++ + Y P IL V +SWVSFW+ DA P RT LG +T+LT L
Sbjct: 182 YVVMTIYFELSRRMGYFTIQTYIPCILTVVLSWVSFWIKKDATPARTALGITTVLTMTTL 241
Query: 160 GIETGSSLPNVSYI 173
SLP VSY+
Sbjct: 242 STIARKSLPRVSYV 255
Score = 65 (27.9 bits), Expect = 8.1e-19, Sum P(2) = 8.1e-19
Identities = 17/77 (22%), Positives = 32/77 (41%)
Query: 18 EFKVQLLLQLHWKDPRLEYRHYAPHITEMVGERNFIQNIWTPHIYLTNERDSLVLGLYRR 77
E+++ + W D RL + +T N + IW P N + + +
Sbjct: 33 EYQIDIFFAQTWTDSRLRFNSTMKILTL---NSNMVGLIWIPDTIFRNSKTAEAHWITTP 89
Query: 78 DMLVSILPDGDMLFSTR 94
+ L+ I DG +L++ R
Sbjct: 90 NQLLRIWNDGKILYTLR 106
>UNIPROTKB|F1PHI6 [details] [associations]
symbol:GABRG3 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0005886 "plasma membrane" evidence=IEA] [GO:0007214
"gamma-aminobutyric acid signaling pathway" evidence=IEA]
[GO:0006821 "chloride transport" evidence=IEA] [GO:0005230
"extracellular ligand-gated ion channel activity" evidence=IEA]
[GO:0004890 "GABA-A receptor activity" evidence=IEA]
InterPro:IPR005437 InterPro:IPR005440 InterPro:IPR006028
InterPro:IPR006029 InterPro:IPR006201 InterPro:IPR006202
Pfam:PF02932 PRINTS:PR00253 PRINTS:PR01620 PRINTS:PR01623
GO:GO:0016021 GO:GO:0005886 GO:GO:0005230 GO:GO:0004890
Gene3D:2.70.170.10 PANTHER:PTHR18945 SUPFAM:SSF90112
SUPFAM:SSF63712 GO:GO:0007214 GO:GO:0006821
GeneTree:ENSGT00540000070314 EMBL:AAEX03002173
Ensembl:ENSCAFT00000015775 OMA:HERINLH Uniprot:F1PHI6
Length = 277
Score = 222 (83.2 bits), Expect = 2.2e-18, P = 2.2e-18
Identities = 42/99 (42%), Positives = 63/99 (63%)
Query: 100 YSSLTLTFILNRQYGFYLMDFYAPSILLVCISWVSFWMAPDAVPGRTILGASTMLTFFQL 159
Y +T+ F L+R+ G++ + Y P IL V +SWVSFW+ DA P RT LG +T+LT L
Sbjct: 50 YVVMTIYFELSRRMGYFTIQTYIPCILTVVLSWVSFWIKKDATPARTALGITTVLTMTTL 109
Query: 160 GIETGSSLPNVSYIRSNDVWFFACTVFIFLSLAEFAFVN 198
+SLP VSY+ + D++ C +F+F +L E+A +N
Sbjct: 110 STIARNSLPRVSYVTAMDLFVTVCFLFVFAALMEYATLN 148
>UNIPROTKB|F1NWI6 [details] [associations]
symbol:GABRR2 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0005230 "extracellular ligand-gated ion channel
activity" evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0016021 "integral to membrane" evidence=IEA] [GO:0030054 "cell
junction" evidence=IEA] [GO:0045211 "postsynaptic membrane"
evidence=IEA] [GO:0004890 "GABA-A receptor activity" evidence=IEA]
[GO:0007214 "gamma-aminobutyric acid signaling pathway"
evidence=IEA] [GO:0007601 "visual perception" evidence=IEA]
InterPro:IPR006028 InterPro:IPR006029 InterPro:IPR006201
InterPro:IPR006202 InterPro:IPR008059 InterPro:IPR018000
Pfam:PF02931 Pfam:PF02932 PRINTS:PR00253 PRINTS:PR01672
PROSITE:PS00236 GO:GO:0016021 GO:GO:0005886 GO:GO:0030054
GO:GO:0045211 GO:GO:0005230 GO:GO:0004890 Gene3D:2.70.170.10
PANTHER:PTHR18945 SUPFAM:SSF90112 SUPFAM:SSF63712
TIGRFAMs:TIGR00860 GO:GO:0007214 GeneTree:ENSGT00630000089571
EMBL:AADN02002377 IPI:IPI00680961 Ensembl:ENSGALT00000031682
Uniprot:F1NWI6
Length = 298
Score = 221 (82.9 bits), Expect = 2.8e-18, P = 2.8e-18
Identities = 48/114 (42%), Positives = 69/114 (60%)
Query: 91 FSTRSRAYMYSS------LTLTFILNRQYGFYLMDFYAPSILLVCISWVSFWMAPDAVPG 144
F T SR YSS L ++F L R F+L+ Y P+ L+V +SWVSFW+ AVP
Sbjct: 95 FHTTSRLAFYSSTGWYNRLYISFTLRRHIFFFLLQTYFPATLMVMLSWVSFWIDRRAVPA 154
Query: 145 RTILGASTMLTFFQLGIETGSSLPNVSYIRSNDVWFFACTVFIFLSLAEFAFVN 198
R LG +T+LT + +S+P VSYI++ D++ + VF+FLS+ E+A VN
Sbjct: 155 RVSLGITTVLTMSTIITGVNASMPRVSYIKAVDIYLWVSFVFVFLSVLEYAAVN 208
>UNIPROTKB|H7BZQ0 [details] [associations]
symbol:GABRG3 "Gamma-aminobutyric acid receptor subunit
gamma-3" species:9606 "Homo sapiens" [GO:0004890 "GABA-A receptor
activity" evidence=IEA] [GO:0006821 "chloride transport"
evidence=IEA] [GO:0007214 "gamma-aminobutyric acid signaling
pathway" evidence=IEA] [GO:0016021 "integral to membrane"
evidence=IEA] InterPro:IPR005440 InterPro:IPR006028
InterPro:IPR006029 InterPro:IPR006201 Pfam:PF02932 PRINTS:PR00253
PRINTS:PR01623 GO:GO:0016021 GO:GO:0004890 PANTHER:PTHR18945
SUPFAM:SSF90112 GO:GO:0007214 GO:GO:0006821 HGNC:HGNC:4088
EMBL:AC127511 EMBL:AC104002 EMBL:AC135326 EMBL:AC136896
EMBL:AC144833 EMBL:AC145436 EMBL:EU606049 PRIDE:H7BZQ0
Ensembl:ENST00000451330 Uniprot:H7BZQ0
Length = 169
Score = 221 (82.9 bits), Expect = 2.8e-18, P = 2.8e-18
Identities = 42/99 (42%), Positives = 62/99 (62%)
Query: 100 YSSLTLTFILNRQYGFYLMDFYAPSILLVCISWVSFWMAPDAVPGRTILGASTMLTFFQL 159
Y +T+ F L+R+ G++ + Y P IL V +SWVSFW+ DA P RT LG +T+LT L
Sbjct: 3 YVVMTIYFELSRRMGYFTIQTYIPCILTVVLSWVSFWIKKDATPARTALGITTVLTMTTL 62
Query: 160 GIETGSSLPNVSYIRSNDVWFFACTVFIFLSLAEFAFVN 198
SLP VSY+ + D++ C +F+F +L E+A +N
Sbjct: 63 STIARKSLPRVSYVTAMDLFVTVCFLFVFAALMEYATLN 101
>UNIPROTKB|G5E9Z6 [details] [associations]
symbol:GABRA2 "Gamma-aminobutyric acid receptor subunit
alpha-2" species:9606 "Homo sapiens" [GO:0004890 "GABA-A receptor
activity" evidence=IEA] [GO:0005230 "extracellular ligand-gated ion
channel activity" evidence=IEA] [GO:0006821 "chloride transport"
evidence=IEA] [GO:0007214 "gamma-aminobutyric acid signaling
pathway" evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0016021 "integral to membrane" evidence=IEA] [GO:0030054 "cell
junction" evidence=IEA] [GO:0045211 "postsynaptic membrane"
evidence=IEA] InterPro:IPR001390 InterPro:IPR005432
InterPro:IPR006028 InterPro:IPR006029 InterPro:IPR006201
InterPro:IPR006202 InterPro:IPR018000 Pfam:PF02931 Pfam:PF02932
PRINTS:PR00252 PRINTS:PR00253 PRINTS:PR01079 PRINTS:PR01615
PROSITE:PS00236 GO:GO:0016021 GO:GO:0005886 GO:GO:0030054
GO:GO:0045211 GO:GO:0005230 GO:GO:0004890 Gene3D:2.70.170.10
PANTHER:PTHR18945 SUPFAM:SSF90112 SUPFAM:SSF63712
TIGRFAMs:TIGR00860 GO:GO:0007214 EMBL:CH471069 GO:GO:0006821
UniGene:Hs.116250 HGNC:HGNC:4076 ChiTaRS:GABRA2 EMBL:AC084352
EMBL:AC093745 EMBL:AC095060 EMBL:AC104072 ProteinModelPortal:G5E9Z6
SMR:G5E9Z6 Ensembl:ENST00000515082 ArrayExpress:G5E9Z6 Bgee:G5E9Z6
Uniprot:G5E9Z6
Length = 367
Score = 222 (83.2 bits), Expect = 4.4e-18, P = 4.4e-18
Identities = 65/206 (31%), Positives = 101/206 (49%)
Query: 6 KLVDIGNLSFQQEFKVQLLLQLHWKDPRLEYRHYAP-HITEMVGERNFIQNIWTPHIYLT 64
++ D G L + VQ +H +D ++ H P + + IWT Y
Sbjct: 147 RIQDDGTLLYTMRLTVQAECPMHLEDFPMD-AHSCPLKFGSYAYTTSEVTYIWT---Y-- 200
Query: 65 NERDSLVLG-----LYRRDMLVSILPDGDMLFSTRSRAYMYSSLTLTFILNRQYGFYLMD 119
N DS+ + L + D+L + + ST Y+ +T F L R+ G++++
Sbjct: 201 NASDSVQVAPDGSRLNQYDLLGQSIGKETIKSSTGE----YTVMTAHFHLKRKIGYFVIQ 256
Query: 120 FYAPSILLVCISWVSFWMAPDAVPGRTILGASTMLTFFQLGIETGSSLPNVSYIRSNDVW 179
Y P I+ V +S VSFW+ ++VP RT+ G +T+LT L I +SLP V+Y + D W
Sbjct: 257 TYLPCIMTVILSQVSFWLNRESVPARTVFGVTTVLTMTTLSISARNSLPKVAYATAMD-W 315
Query: 180 FFA-CTVFIFLSLAEFAFVNTIWRYG 204
F A C F+F +L EFA VN + G
Sbjct: 316 FIAVCYAFVFSALIEFATVNYFTKRG 341
>UNIPROTKB|I3L720 [details] [associations]
symbol:GABRA2 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0030424 "axon" evidence=IEA] [GO:0030285 "integral to
synaptic vesicle membrane" evidence=IEA] [GO:0008503
"benzodiazepine receptor activity" evidence=IEA] [GO:0007214
"gamma-aminobutyric acid signaling pathway" evidence=IEA]
[GO:0006836 "neurotransmitter transport" evidence=IEA] [GO:0001505
"regulation of neurotransmitter levels" evidence=IEA] [GO:0045211
"postsynaptic membrane" evidence=IEA] [GO:0030054 "cell junction"
evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0006821 "chloride transport" evidence=IEA] [GO:0005230
"extracellular ligand-gated ion channel activity" evidence=IEA]
[GO:0004890 "GABA-A receptor activity" evidence=IEA]
InterPro:IPR001390 InterPro:IPR005432 InterPro:IPR006028
InterPro:IPR006029 InterPro:IPR006201 InterPro:IPR006202
InterPro:IPR018000 Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252
PRINTS:PR00253 PRINTS:PR01079 PRINTS:PR01615 PROSITE:PS00236
GO:GO:0005886 GO:GO:0030285 GO:GO:0030054 GO:GO:0045211
GO:GO:0005230 GO:GO:0004890 Gene3D:2.70.170.10 PANTHER:PTHR18945
SUPFAM:SSF90112 SUPFAM:SSF63712 TIGRFAMs:TIGR00860 GO:GO:0030424
GO:GO:0007214 GO:GO:0006836 GO:GO:0001505 GO:GO:0006821
GeneTree:ENSGT00550000074441 GO:GO:0008503 OMA:TTAEPNK
EMBL:FP312872 EMBL:CU861582 Ensembl:ENSSSCT00000023000
Uniprot:I3L720
Length = 367
Score = 222 (83.2 bits), Expect = 4.4e-18, P = 4.4e-18
Identities = 65/206 (31%), Positives = 101/206 (49%)
Query: 6 KLVDIGNLSFQQEFKVQLLLQLHWKDPRLEYRHYAP-HITEMVGERNFIQNIWTPHIYLT 64
++ D G L + VQ +H +D ++ H P + + IWT Y
Sbjct: 63 RIQDDGTLLYTMRLTVQAECPMHLEDFPMD-AHSCPLKFGSYAYTTSEVTYIWT---Y-- 116
Query: 65 NERDSLVLG-----LYRRDMLVSILPDGDMLFSTRSRAYMYSSLTLTFILNRQYGFYLMD 119
N DS+ + L + D+L + + ST Y+ +T F L R+ G++++
Sbjct: 117 NASDSVQVAPDGSRLNQYDLLGQSIGKETIKSSTGE----YTVMTAHFHLKRKIGYFVIQ 172
Query: 120 FYAPSILLVCISWVSFWMAPDAVPGRTILGASTMLTFFQLGIETGSSLPNVSYIRSNDVW 179
Y P I+ V +S VSFW+ ++VP RT+ G +T+LT L I +SLP V+Y + D W
Sbjct: 173 TYLPCIMTVILSQVSFWLNRESVPARTVFGVTTVLTMTTLSISARNSLPKVAYATAMD-W 231
Query: 180 FFA-CTVFIFLSLAEFAFVNTIWRYG 204
F A C F+F +L EFA VN + G
Sbjct: 232 FIAVCYAFVFSALIEFATVNYFTKRG 257
>UNIPROTKB|I3LPL5 [details] [associations]
symbol:I3LPL5 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0045211 "postsynaptic membrane" evidence=IEA]
[GO:0030054 "cell junction" evidence=IEA] [GO:0016021 "integral to
membrane" evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0007214 "gamma-aminobutyric acid signaling pathway"
evidence=IEA] [GO:0006821 "chloride transport" evidence=IEA]
[GO:0005230 "extracellular ligand-gated ion channel activity"
evidence=IEA] [GO:0004890 "GABA-A receptor activity" evidence=IEA]
InterPro:IPR001390 InterPro:IPR005431 InterPro:IPR006028
InterPro:IPR006029 InterPro:IPR006201 InterPro:IPR006202
InterPro:IPR018000 Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252
PRINTS:PR00253 PRINTS:PR01079 PRINTS:PR01614 PROSITE:PS00236
GO:GO:0016021 GO:GO:0005886 GO:GO:0030054 GO:GO:0045211
GO:GO:0005230 GO:GO:0004890 Gene3D:2.70.170.10 PANTHER:PTHR18945
SUPFAM:SSF90112 SUPFAM:SSF63712 TIGRFAMs:TIGR00860 GO:GO:0007214
GO:GO:0006821 GeneTree:ENSGT00550000074441 EMBL:CU928257
Ensembl:ENSSSCT00000022596 OMA:LRIMEDG Uniprot:I3LPL5
Length = 355
Score = 221 (82.9 bits), Expect = 4.6e-18, P = 4.6e-18
Identities = 67/211 (31%), Positives = 101/211 (47%)
Query: 1 MSATSKLVDI---GNLSFQQEFKVQLLLQLHWKDPRLEYRHYAP-HITEMVGERNFIQNI 56
M+ +KL+ I G L + V+ +H +D ++ H P R +
Sbjct: 141 MTMPNKLLRITEDGTLLYTMRLTVRAECPMHLEDFPMD-AHACPLKFGSYAYTRAEVVYE 199
Query: 57 WT--PHIYLTNERDSLVLGLYRRDMLVSILPDGDMLFSTRSRAYMYSSLTLTFILNRQYG 114
WT P + D L Y D+L + G + ST Y +T F L R+ G
Sbjct: 200 WTREPARSVVVAEDGSRLNQY--DLLGQTVDSGIVQSSTGE----YVVMTTHFHLKRKIG 253
Query: 115 FYLMDFYAPSILLVCISWVSFWMAPDAVPGRTILGASTMLTFFQLGIETGSSLPNVSYIR 174
++++ Y P I+ V +S VSFW+ ++VP RT+ G +T+LT L I +SLP V+Y
Sbjct: 254 YFVIQTYLPCIMTVILSQVSFWLNRESVPARTVFGVTTVLTMTTLSISARNSLPKVAYAT 313
Query: 175 SNDVWFFA-CTVFIFLSLAEFAFVNTIWRYG 204
+ D WF A C F+F +L EFA VN + G
Sbjct: 314 AMD-WFIAVCYAFVFSALIEFATVNYFTKRG 343
>UNIPROTKB|P10063 [details] [associations]
symbol:GABRA2 "Gamma-aminobutyric acid receptor subunit
alpha-2" species:9913 "Bos taurus" [GO:0045211 "postsynaptic
membrane" evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0034707 "chloride channel complex" evidence=IEA] [GO:0030054
"cell junction" evidence=IEA] [GO:0005254 "chloride channel
activity" evidence=IEA] [GO:0007214 "gamma-aminobutyric acid
signaling pathway" evidence=IEA] [GO:0005230 "extracellular
ligand-gated ion channel activity" evidence=IEA] [GO:0004890
"GABA-A receptor activity" evidence=IEA] InterPro:IPR001390
InterPro:IPR005432 InterPro:IPR006028 InterPro:IPR006029
InterPro:IPR006201 InterPro:IPR006202 InterPro:IPR018000
Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252 PRINTS:PR00253
PRINTS:PR01079 PRINTS:PR01615 PROSITE:PS00236 GO:GO:0005886
GO:GO:0030054 GO:GO:0045211 GO:GO:0005230 GO:GO:0004890
Gene3D:2.70.170.10 PANTHER:PTHR18945 SUPFAM:SSF90112
SUPFAM:SSF63712 TIGRFAMs:TIGR00860 GO:GO:0007214 GO:GO:0034707
GO:GO:0005254 KO:K05175 eggNOG:NOG238757 HOGENOM:HOG000231337
HOVERGEN:HBG051707 OrthoDB:EOG4ZS935 EMBL:X12361 IPI:IPI00713807
PIR:S12510 RefSeq:NP_776966.1 UniGene:Bt.174
ProteinModelPortal:P10063 GeneID:282236 KEGG:bta:282236 CTD:2555
InParanoid:P10063 BindingDB:P10063 ChEMBL:CHEMBL2321
NextBio:20806055 Uniprot:P10063
Length = 451
Score = 225 (84.3 bits), Expect = 4.6e-18, P = 4.6e-18
Identities = 64/202 (31%), Positives = 99/202 (49%)
Query: 6 KLVDIGNLSFQQEFKVQLLLQLHWKDPRLEYRHYAP-HITEMVGERNFIQNIWTPHIYLT 64
++ D G L + VQ +H +D ++ H P + + IWT Y
Sbjct: 147 RIQDDGTLLYTMRLTVQAECPMHLEDFPMD-AHSCPLKFGSYAYTTSEVTYIWT---Y-- 200
Query: 65 NERDSLVLGLYRRDMLVSILPDGDMLFST-RSRAYMYSSLTLTFILNRQYGFYLMDFYAP 123
N DS+ + + LP + T +S Y+ +T F L R+ G++++ Y P
Sbjct: 201 NASDSVQVAPDGSRLNQYDLPGQSIGKETIKSSTGEYTVMTAHFHLKRKIGYFVIQTYLP 260
Query: 124 SILLVCISWVSFWMAPDAVPGRTILGASTMLTFFQLGIETGSSLPNVSYIRSNDVWFFA- 182
I+ V +S VSFW+ ++VP RT+ G +T+LT L I +SLP V+Y + D WF A
Sbjct: 261 CIMTVILSQVSFWLNRESVPARTVFGVTTVLTMTTLSISARNSLPKVAYATAMD-WFIAV 319
Query: 183 CTVFIFLSLAEFAFVNTIWRYG 204
C F+F +L EFA VN + G
Sbjct: 320 CYAFVFSALIEFATVNYFTKRG 341
>WB|WBGene00001512 [details] [associations]
symbol:gab-1 species:6239 "Caenorhabditis elegans"
[GO:0006811 "ion transport" evidence=IEA;IDA] [GO:0004890 "GABA-A
receptor activity" evidence=IEA;IDA] [GO:0005230 "extracellular
ligand-gated ion channel activity" evidence=IEA;IDA] [GO:0005216
"ion channel activity" evidence=IEA] [GO:0016020 "membrane"
evidence=IEA] [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0006810 "transport" evidence=IEA] [GO:0045211 "postsynaptic
membrane" evidence=IEA] [GO:0007268 "synaptic transmission"
evidence=ISS] [GO:0045202 "synapse" evidence=IC] InterPro:IPR002289
InterPro:IPR006028 InterPro:IPR006029 InterPro:IPR006201
InterPro:IPR006202 InterPro:IPR018000 Pfam:PF02931 Pfam:PF02932
PRINTS:PR00252 PRINTS:PR00253 PRINTS:PR01160 PROSITE:PS00236
GO:GO:0005886 GO:GO:0007268 GO:GO:0030054 GO:GO:0045211
GO:GO:0005230 GO:GO:0004890 Gene3D:2.70.170.10 PANTHER:PTHR18945
SUPFAM:SSF90112 SUPFAM:SSF63712 TIGRFAMs:TIGR00860 GO:GO:0045202
GO:GO:0034707 GO:GO:0005254 eggNOG:NOG77438
GeneTree:ENSGT00630000089685 HOGENOM:HOG000231335 KO:K05181
EMBL:AF498370 EMBL:Z93397 PIR:T27614 RefSeq:NP_499661.2 HSSP:P23415
ProteinModelPortal:O18276 SMR:O18276 PaxDb:O18276
EnsemblMetazoa:ZC482.1 GeneID:176691 KEGG:cel:CELE_ZC482.1
UCSC:ZC482.1 CTD:176691 WormBase:ZC482.1 InParanoid:O18276
OMA:HEVTERN NextBio:893616 Uniprot:O18276
Length = 550
Score = 227 (85.0 bits), Expect = 4.7e-18, P = 4.7e-18
Identities = 44/115 (38%), Positives = 68/115 (59%)
Query: 88 DMLFSTRSRAYMYSSLTLTFILNRQYGFYLMDFYAPSILLVCISWVSFWMAPDAVPGRTI 147
D + ST + +Y L+L F L R G+++ Y P +L+V +SWVSFW+ +A R
Sbjct: 238 DSIVSTATGSYQ--RLSLVFQLRRSVGYFIFQTYLPCVLIVMLSWVSFWINHEATSARVA 295
Query: 148 LGASTMLTFFQLGIETGSSLPNVSYIRSNDVWFFACTVFIFLSLAEFAFVN-TIW 201
LG +T+LT + SLP +SY++S D++ C VF+F +L E+A VN + W
Sbjct: 296 LGITTVLTMTTISTGVRQSLPRISYVKSIDIYLVMCFVFVFAALLEYAAVNYSYW 350
Score = 126 (49.4 bits), Expect = 1.2e-05, P = 1.2e-05
Identities = 47/192 (24%), Positives = 84/192 (43%)
Query: 18 EFKVQLLLQLHWKDPRLEYRHYAPHITEMVGERNFIQNIWTPHIYLTNERDSLVLGLYRR 77
++ + + L +W D RL + + P I EM F QNIW P +L N++ S + + R
Sbjct: 98 DYTLTMYLHQYWTDERLRWSNEIP-IDEMTLSGEFSQNIWVPDTFLANDKHSYLHEVTER 156
Query: 78 DMLVSILPDGDMLFSTRSRAYMYSSLTL-TFILNRQYGFYLMDFYAPSILLVCISWVSFW 136
+ ++ I DG + + R + + S+ L F L+ Q ++ Y + V + W ++
Sbjct: 157 NKMLRINVDGKVAYGMRLTSTLSCSMNLRNFPLDSQNCTVEIESYGYTTSEVLMKW-NYP 215
Query: 137 MAPDAV-----PGRTILGASTMLTFFQLGIETGSSLPNVSYIRSNDVWFF-----ACTVF 186
+A V P TI G T + + L V +R + +F C +
Sbjct: 216 LAVHGVEQADVPQFTITGFHTEDSIVSTATGSYQRLSLVFQLRRSVGYFIFQTYLPCVLI 275
Query: 187 IFLSLAEFAFVN 198
+ LS F ++N
Sbjct: 276 VMLSWVSF-WIN 286
>RGD|61856 [details] [associations]
symbol:Gabra2 "gamma-aminobutyric acid (GABA) A receptor, alpha 2"
species:10116 "Rattus norvegicus" [GO:0001505 "regulation of
neurotransmitter levels" evidence=ISO] [GO:0004890 "GABA-A receptor
activity" evidence=TAS] [GO:0005230 "extracellular ligand-gated ion
channel activity" evidence=IEA] [GO:0005254 "chloride channel
activity" evidence=IEA] [GO:0006836 "neurotransmitter transport"
evidence=ISO] [GO:0007214 "gamma-aminobutyric acid signaling
pathway" evidence=IEA;ISO] [GO:0008503 "benzodiazepine receptor
activity" evidence=ISO] [GO:0030054 "cell junction" evidence=IEA]
[GO:0030285 "integral to synaptic vesicle membrane" evidence=ISO]
[GO:0030424 "axon" evidence=ISO] [GO:0032590 "dendrite membrane"
evidence=IDA] [GO:0034707 "chloride channel complex" evidence=IEA]
[GO:0045211 "postsynaptic membrane" evidence=IEA] InterPro:IPR001390
InterPro:IPR005432 InterPro:IPR006028 InterPro:IPR006029
InterPro:IPR006201 InterPro:IPR006202 InterPro:IPR018000
Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252 PRINTS:PR00253
PRINTS:PR01079 PRINTS:PR01615 PROSITE:PS00236 RGD:61856
GO:GO:0030054 GO:GO:0045211 GO:GO:0005230 GO:GO:0004890
Gene3D:2.70.170.10 PANTHER:PTHR18945 SUPFAM:SSF90112 SUPFAM:SSF63712
TIGRFAMs:TIGR00860 GO:GO:0007214 GO:GO:0032590 GO:GO:0034707
GO:GO:0005254 eggNOG:NOG238757 HOGENOM:HOG000231337
HOVERGEN:HBG051707 EMBL:L08491 IPI:IPI00950967 PIR:JH0370
UniGene:Rn.48180 ProteinModelPortal:P23576 PhosphoSite:P23576
PRIDE:P23576 UCSC:RGD:61856 InParanoid:P23576 BindingDB:P23576
ChEMBL:CHEMBL341 ArrayExpress:P23576 Genevestigator:P23576
GermOnline:ENSRNOG00000002349 Uniprot:P23576
Length = 451
Score = 224 (83.9 bits), Expect = 6.0e-18, P = 6.0e-18
Identities = 64/203 (31%), Positives = 98/203 (48%)
Query: 6 KLVDIGNLSFQQEFKVQLLLQLHWKDPRLEYRHYAP-HITEMVGERNFIQNIWT--PHIY 62
++ D G L + VQ +H +D ++ H P + + IWT P
Sbjct: 147 RIQDDGTLLYTMRLTVQAECPMHLEDFPMD-AHSCPLKFGSYAYTTSEVTYIWTYNPSDS 205
Query: 63 LTNERDSLVLGLYRRDMLVSILPDGDMLFSTRSRAYMYSSLTLTFILNRQYGFYLMDFYA 122
+ D L Y D+L + + ST Y+ +T F L R+ G++++ Y
Sbjct: 206 VQVAPDGSRLNQY--DLLGQSIGKETIKSSTGE----YTVMTAHFHLKRKIGYFVIQTYL 259
Query: 123 PSILLVCISWVSFWMAPDAVPGRTILGASTMLTFFQLGIETGSSLPNVSYIRSNDVWFFA 182
P I+ V +S VSFW+ ++VP RT+ G +T+LT L I +SLP V+Y + D WF A
Sbjct: 260 PCIMTVILSQVSFWLNRESVPARTVFGVTTVLTMTTLSISARNSLPKVAYATAMD-WFIA 318
Query: 183 -CTVFIFLSLAEFAFVNTIWRYG 204
C F+F +L EFA VN + G
Sbjct: 319 VCYAFVFSALIEFATVNYFTKRG 341
>WB|WBGene00020657 [details] [associations]
symbol:lgc-53 species:6239 "Caenorhabditis elegans"
[GO:0006811 "ion transport" evidence=IEA] [GO:0016021 "integral to
membrane" evidence=IEA] [GO:0016020 "membrane" evidence=IEA]
[GO:0005230 "extracellular ligand-gated ion channel activity"
evidence=IEA] [GO:0006810 "transport" evidence=IEA] [GO:0045211
"postsynaptic membrane" evidence=IEA] InterPro:IPR006028
InterPro:IPR006029 InterPro:IPR006201 InterPro:IPR006202
InterPro:IPR018000 Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252
PRINTS:PR00253 PROSITE:PS00236 GO:GO:0016021 GO:GO:0005886
GO:GO:0030054 GO:GO:0045211 GO:GO:0005230 Gene3D:2.70.170.10
PANTHER:PTHR18945 SUPFAM:SSF90112 SUPFAM:SSF63712
TIGRFAMs:TIGR00860 GeneTree:ENSGT00540000070314 EMBL:FO080492
RefSeq:NP_741945.3 ProteinModelPortal:H2KYN9 SMR:H2KYN9
EnsemblMetazoa:T21F2.1a GeneID:188702 KEGG:cel:CELE_T21F2.1
CTD:188702 WormBase:T21F2.1a OMA:FTAFNIF Uniprot:H2KYN9
Length = 497
Score = 225 (84.3 bits), Expect = 6.1e-18, P = 6.1e-18
Identities = 43/102 (42%), Positives = 62/102 (60%)
Query: 97 AYMYSSLTLTFILNRQYGFYLMDFYAPSILLVCISWVSFWMAPDAVPGRTILGASTMLTF 156
A ++ L + F R YG+Y++ Y P+ L V ISW++FW+ A+P R LG S+++
Sbjct: 278 AGLWDQLEVKFTFRRLYGYYVLQAYMPTYLSVFISWIAFWIDTKALPARITLGVSSLMAL 337
Query: 157 -FQLGIETGSSLPNVSYIRSNDVWFFACTVFIFLSLAEFAFV 197
FQ G +LP VSY+++ D+W F C FIFLSL E A V
Sbjct: 338 TFQFG-NIVKNLPRVSYVKALDIWMFGCVGFIFLSLVELAVV 378
>UNIPROTKB|E2R4R7 [details] [associations]
symbol:GABRR2 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0045211 "postsynaptic membrane" evidence=IEA]
[GO:0030054 "cell junction" evidence=IEA] [GO:0016021 "integral to
membrane" evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0005230 "extracellular ligand-gated ion channel activity"
evidence=IEA] [GO:0004890 "GABA-A receptor activity" evidence=IEA]
InterPro:IPR006028 InterPro:IPR006029 InterPro:IPR006201
InterPro:IPR006202 InterPro:IPR008057 InterPro:IPR018000
Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252 PRINTS:PR00253
PRINTS:PR01670 PROSITE:PS00236 GO:GO:0016021 GO:GO:0005886
GO:GO:0030054 GO:GO:0045211 GO:GO:0005230 GO:GO:0004890
Gene3D:2.70.170.10 PANTHER:PTHR18945 SUPFAM:SSF90112
SUPFAM:SSF63712 TIGRFAMs:TIGR00860 GeneTree:ENSGT00630000089571
EMBL:AAEX03008512 EMBL:AAEX03008511 Ensembl:ENSCAFT00000004969
OMA:RWTGTVE Uniprot:E2R4R7
Length = 364
Score = 220 (82.5 bits), Expect = 7.0e-18, P = 7.0e-18
Identities = 48/114 (42%), Positives = 68/114 (59%)
Query: 91 FSTRSRAYMYSS------LTLTFILNRQYGFYLMDFYAPSILLVCISWVSFWMAPDAVPG 144
F T SR YSS L + F L R F+L+ Y P+ L+V +SWVSFW+ AVP
Sbjct: 138 FHTTSRLAFYSSTGWYNRLYINFTLRRHIFFFLLQTYFPATLMVMLSWVSFWIDRRAVPA 197
Query: 145 RTILGASTMLTFFQLGIETGSSLPNVSYIRSNDVWFFACTVFIFLSLAEFAFVN 198
R LG +T+LT + +S+P VSYI++ D++ + VF+FLS+ E+A VN
Sbjct: 198 RVSLGITTVLTMSTIITGVNASMPRVSYIKAVDIYLWVSFVFVFLSVLEYAAVN 251
>RGD|68320 [details] [associations]
symbol:Gabre "gamma-aminobutyric acid (GABA) A receptor, epsilon"
species:10116 "Rattus norvegicus" [GO:0004890 "GABA-A receptor
activity" evidence=IDA] [GO:0005230 "extracellular ligand-gated ion
channel activity" evidence=IEA] [GO:0005254 "chloride channel
activity" evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0006821 "chloride transport" evidence=TAS] [GO:0007214
"gamma-aminobutyric acid signaling pathway" evidence=IDA]
[GO:0030054 "cell junction" evidence=IEA] [GO:0034707 "chloride
channel complex" evidence=IEA] [GO:0042493 "response to drug"
evidence=IEP] [GO:0045211 "postsynaptic membrane" evidence=IEA]
InterPro:IPR006028 InterPro:IPR006029 InterPro:IPR006201
InterPro:IPR006202 InterPro:IPR008099 InterPro:IPR018000
Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252 PRINTS:PR00253
PRINTS:PR01723 PROSITE:PS00236 RGD:68320 GO:GO:0005886 GO:GO:0042493
GO:GO:0030054 GO:GO:0045211 GO:GO:0005230 GO:GO:0004890
Gene3D:2.70.170.10 PANTHER:PTHR18945 SUPFAM:SSF90112 SUPFAM:SSF63712
TIGRFAMs:TIGR00860 GO:GO:0007214 GO:GO:0034707 GO:GO:0005254
GO:GO:0006821 HOVERGEN:HBG051707 EMBL:AF255612 EMBL:U92284
IPI:IPI00191361 UniGene:Rn.54455 ProteinModelPortal:Q9ES14
PRIDE:Q9ES14 eggNOG:NOG148905 BindingDB:Q9ES14 ChEMBL:CHEMBL306
ArrayExpress:Q9ES14 Genevestigator:Q9ES14 Uniprot:Q9ES14
Length = 506
Score = 175 (66.7 bits), Expect = 7.1e-18, Sum P(2) = 7.1e-18
Identities = 34/96 (35%), Positives = 54/96 (56%)
Query: 103 LTLTFILNRQYGFYLMDFYAPSILLVCISWVSFWMAPDAVPGRTILGASTMLTFFQLGIE 162
+T F ++R++GF + Y PS + +SWVSFW+ +A R +G S++LT LG
Sbjct: 268 MTFFFNVSRRFGFIVFQNYIPSSVTTMLSWVSFWIKIEAAAARASVGVSSVLTMATLGTF 327
Query: 163 TGSSLPNVSYIRSNDVWFFACTVFIFLSLAEFAFVN 198
+ + P VSY+ + D + C V F +L EF +N
Sbjct: 328 SRKNFPRVSYLTALDFYIAICFVLCFCTLLEFTVLN 363
Score = 73 (30.8 bits), Expect = 7.1e-18, Sum P(2) = 7.1e-18
Identities = 17/86 (19%), Positives = 36/86 (41%)
Query: 10 IGNLSF-QQEFKVQLLLQLHWKDPRLEYRHYAPHITEMVGERNFIQNIWTPHIYLTNERD 68
+G +S E+ + ++ W D RL Y ++ N + +W P + N +
Sbjct: 107 LGPISILDMEYSIDIIFYQTWYDERLRYNDT---FETLILHGNVVSQLWIPDTFFRNSKR 163
Query: 69 SLVLGLYRRDMLVSILPDGDMLFSTR 94
+ + + + I DG +L++ R
Sbjct: 164 TQEYDITIPNQMALIHKDGKVLYTVR 189
>UNIPROTKB|F1NXA6 [details] [associations]
symbol:GABRA2 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0004890 "GABA-A receptor activity"
evidence=IEA] [GO:0005230 "extracellular ligand-gated ion channel
activity" evidence=IEA] [GO:0006821 "chloride transport"
evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0030054 "cell junction" evidence=IEA] [GO:0045211 "postsynaptic
membrane" evidence=IEA] [GO:0001505 "regulation of neurotransmitter
levels" evidence=IEA] [GO:0006836 "neurotransmitter transport"
evidence=IEA] [GO:0007214 "gamma-aminobutyric acid signaling
pathway" evidence=IEA] [GO:0008503 "benzodiazepine receptor
activity" evidence=IEA] [GO:0030285 "integral to synaptic vesicle
membrane" evidence=IEA] [GO:0030424 "axon" evidence=IEA]
InterPro:IPR001390 InterPro:IPR005432 InterPro:IPR006028
InterPro:IPR006029 InterPro:IPR006201 InterPro:IPR006202
InterPro:IPR018000 Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252
PRINTS:PR00253 PRINTS:PR01079 PRINTS:PR01615 PROSITE:PS00236
GO:GO:0005886 GO:GO:0030285 GO:GO:0030054 GO:GO:0045211
GO:GO:0005230 GO:GO:0004890 Gene3D:2.70.170.10 PANTHER:PTHR18945
SUPFAM:SSF90112 SUPFAM:SSF63712 TIGRFAMs:TIGR00860 GO:GO:0030424
GO:GO:0007214 GO:GO:0006836 GO:GO:0006821
GeneTree:ENSGT00550000074441 GO:GO:0008503 OMA:TTAEPNK
EMBL:AC147646 IPI:IPI00603099 Ensembl:ENSGALT00000022974
Uniprot:F1NXA6
Length = 458
Score = 223 (83.6 bits), Expect = 8.0e-18, P = 8.0e-18
Identities = 65/206 (31%), Positives = 101/206 (49%)
Query: 6 KLVDIGNLSFQQEFKVQLLLQLHWKDPRLEYRHYAP-HITEMVGERNFIQNIWTPHIYLT 64
++ D G L + VQ +H +D ++ H P + + IWT Y
Sbjct: 152 RIQDDGTLLYTMRLTVQAECPMHLEDFPMD-AHSCPLKFGSYAYTTSEVTYIWT---Y-- 205
Query: 65 NERDSLVLG-----LYRRDMLVSILPDGDMLFSTRSRAYMYSSLTLTFILNRQYGFYLMD 119
N DS+ + L + D+L + + ST Y+ +T F L R+ G++++
Sbjct: 206 NASDSVQVAPDGSRLNQYDLLGQTIGKETVKSSTGE----YTVMTAHFHLKRKIGYFVIQ 261
Query: 120 FYAPSILLVCISWVSFWMAPDAVPGRTILGASTMLTFFQLGIETGSSLPNVSYIRSNDVW 179
Y P I+ V +S VSFW+ ++VP RT+ G +T+LT L I +SLP V+Y + D W
Sbjct: 262 TYLPCIMTVILSQVSFWLNRESVPARTVFGVTTVLTMTTLSISARNSLPKVAYATAMD-W 320
Query: 180 FFA-CTVFIFLSLAEFAFVNTIWRYG 204
F A C F+F +L EFA VN + G
Sbjct: 321 FIAVCYAFVFSALIEFATVNYFTKRG 346
>WB|WBGene00013517 [details] [associations]
symbol:lgc-52 species:6239 "Caenorhabditis elegans"
[GO:0006811 "ion transport" evidence=IEA] [GO:0016021 "integral to
membrane" evidence=IEA] [GO:0016020 "membrane" evidence=IEA]
[GO:0005230 "extracellular ligand-gated ion channel activity"
evidence=IEA] [GO:0006810 "transport" evidence=IEA] [GO:0045211
"postsynaptic membrane" evidence=IEA] InterPro:IPR006028
InterPro:IPR006029 InterPro:IPR006201 InterPro:IPR006202
InterPro:IPR018000 Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252
PRINTS:PR00253 PROSITE:PS00236 GO:GO:0016021 GO:GO:0005886
GO:GO:0030054 GO:GO:0045211 GO:GO:0005230 Gene3D:2.70.170.10
PANTHER:PTHR18945 SUPFAM:SSF90112 SUPFAM:SSF63712
GeneTree:ENSGT00540000070314 HOGENOM:HOG000016259 EMBL:AL132862
RefSeq:NP_502839.2 UniGene:Cel.28442 ProteinModelPortal:Q9NA62
SMR:Q9NA62 EnsemblMetazoa:Y73F8A.2 GeneID:190669
KEGG:cel:CELE_Y73F8A.2 UCSC:Y73F8A.2 CTD:190669 WormBase:Y73F8A.2
eggNOG:NOG86111 InParanoid:Q9NA62 OMA:PNILLMI NextBio:946574
Uniprot:Q9NA62
Length = 434
Score = 222 (83.2 bits), Expect = 8.8e-18, P = 8.8e-18
Identities = 47/121 (38%), Positives = 69/121 (57%)
Query: 84 LPDGDML---FSTRSRAY---MYSSLTLTFILNRQYGFYLMDFYAPSILLVCISWVSFWM 137
LPD M + + + AY M+ L+++ R YGFY++ Y P+ + V ISW++FWM
Sbjct: 228 LPDFRMTNITYGSVTEAYTAGMWHRLSVSIHFERLYGFYILQMYLPTYISVFISWIAFWM 287
Query: 138 APDAVPGRTILGASTMLTF-FQLGIETGSSLPNVSYIRSNDVWFFACTVFIFLSLAEFAF 196
A+P R L S+++ FQ G SLP SY+++ D+W F+C FIF SL E A
Sbjct: 288 DTKALPARITLSVSSLMALTFQFG-NIVKSLPKASYVKAIDIWMFSCVGFIFFSLIELAI 346
Query: 197 V 197
V
Sbjct: 347 V 347
>UNIPROTKB|F1PEH3 [details] [associations]
symbol:GABRA2 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0045211 "postsynaptic membrane" evidence=IEA]
[GO:0030054 "cell junction" evidence=IEA] [GO:0016021 "integral to
membrane" evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0007214 "gamma-aminobutyric acid signaling pathway"
evidence=IEA] [GO:0006821 "chloride transport" evidence=IEA]
[GO:0005230 "extracellular ligand-gated ion channel activity"
evidence=IEA] [GO:0004890 "GABA-A receptor activity" evidence=IEA]
InterPro:IPR001390 InterPro:IPR005432 InterPro:IPR006028
InterPro:IPR006029 InterPro:IPR006201 InterPro:IPR006202
InterPro:IPR018000 Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252
PRINTS:PR00253 PRINTS:PR01079 PRINTS:PR01615 PROSITE:PS00236
GO:GO:0016021 GO:GO:0005886 GO:GO:0030054 GO:GO:0045211
GO:GO:0005230 GO:GO:0004890 Gene3D:2.70.170.10 PANTHER:PTHR18945
SUPFAM:SSF90112 SUPFAM:SSF63712 TIGRFAMs:TIGR00860 GO:GO:0007214
GO:GO:0006821 KO:K05175 GeneTree:ENSGT00550000074441 CTD:2555
OMA:TTAEPNK EMBL:AAEX03009033 RefSeq:XP_858923.2
Ensembl:ENSCAFT00000002984 GeneID:482131 KEGG:cfa:482131
Uniprot:F1PEH3
Length = 442
Score = 222 (83.2 bits), Expect = 9.3e-18, P = 9.3e-18
Identities = 65/206 (31%), Positives = 101/206 (49%)
Query: 6 KLVDIGNLSFQQEFKVQLLLQLHWKDPRLEYRHYAP-HITEMVGERNFIQNIWTPHIYLT 64
++ D G L + VQ +H +D ++ H P + + IWT Y
Sbjct: 138 RIQDDGTLLYTMRLTVQAECPMHLEDFPMD-AHSCPLKFGSYAYTTSEVTYIWT---Y-- 191
Query: 65 NERDSLVLG-----LYRRDMLVSILPDGDMLFSTRSRAYMYSSLTLTFILNRQYGFYLMD 119
N DS+ + L + D+L + + ST Y+ +T F L R+ G++++
Sbjct: 192 NASDSVQVAPDGSRLNQYDLLGQSIGKETIKSSTGE----YTVMTAHFHLKRKIGYFVIQ 247
Query: 120 FYAPSILLVCISWVSFWMAPDAVPGRTILGASTMLTFFQLGIETGSSLPNVSYIRSNDVW 179
Y P I+ V +S VSFW+ ++VP RT+ G +T+LT L I +SLP V+Y + D W
Sbjct: 248 TYLPCIMTVILSQVSFWLNRESVPARTVFGVTTVLTMTTLSISARNSLPKVAYATAMD-W 306
Query: 180 FFA-CTVFIFLSLAEFAFVNTIWRYG 204
F A C F+F +L EFA VN + G
Sbjct: 307 FIAVCYAFVFSALIEFATVNYFTKRG 332
>UNIPROTKB|Q9PSA4 [details] [associations]
symbol:GABRR1 "Gamma-aminobutyric acid type C receptor RHO
1 subunit" species:9031 "Gallus gallus" [GO:0005230 "extracellular
ligand-gated ion channel activity" evidence=IEA] [GO:0005886
"plasma membrane" evidence=IEA] [GO:0016021 "integral to membrane"
evidence=IEA] [GO:0030054 "cell junction" evidence=IEA] [GO:0045211
"postsynaptic membrane" evidence=IEA] InterPro:IPR006028
InterPro:IPR006029 InterPro:IPR006201 InterPro:IPR006202
InterPro:IPR018000 Pfam:PF02931 Pfam:PF02932 PRINTS:PR00253
PROSITE:PS00236 GO:GO:0016021 GO:GO:0005886 GO:GO:0030054
GO:GO:0045211 GO:GO:0005230 Gene3D:2.70.170.10 PANTHER:PTHR18945
SUPFAM:SSF90112 SUPFAM:SSF63712 HOVERGEN:HBG051707 eggNOG:NOG77438
HOGENOM:HOG000231335 HSSP:P23415 GeneTree:ENSGT00630000089571
OrthoDB:EOG4RJG1G EMBL:AADN02002380 EMBL:AADN02002378
EMBL:AADN02002379 IPI:IPI00818489 Ensembl:ENSGALT00000037181
InParanoid:Q9PSA4 Uniprot:Q9PSA4
Length = 292
Score = 216 (81.1 bits), Expect = 9.5e-18, P = 9.5e-18
Identities = 53/144 (36%), Positives = 79/144 (54%)
Query: 61 IYLTNERDSLVLGLYRRDMLVSILPDGDMLFSTRSRAYMYSS------LTLTFILNRQYG 114
+Y N DSL + D +S+ F T ++ YSS L + F L R
Sbjct: 71 LYWKNGNDSL-----KTDERISLSQFLIQEFHTTTKLAFYSSTGWYNRLYINFTLRRHIF 125
Query: 115 FYLMDFYAPSILLVCISWVSFWMAPDAVPGRTILGASTMLTFFQLGIETGSSLPNVSYIR 174
F+L+ Y P+ L+V +SWVSFW+ AVP R LG +T+LT + +S+P VSYI+
Sbjct: 126 FFLLQTYFPATLMVMLSWVSFWIDRRAVPARVPLGITTVLTMSTIITGVNASMPRVSYIK 185
Query: 175 SNDVWFFACTVFIFLSLAEFAFVN 198
+ D++ + VF+FLS+ E+A VN
Sbjct: 186 AVDIYLWVSFVFVFLSVLEYAAVN 209
>UNIPROTKB|P47869 [details] [associations]
symbol:GABRA2 "Gamma-aminobutyric acid receptor subunit
alpha-2" species:9606 "Homo sapiens" [GO:0004890 "GABA-A receptor
activity" evidence=IEA] [GO:0005230 "extracellular ligand-gated ion
channel activity" evidence=IEA] [GO:0005254 "chloride channel
activity" evidence=IEA] [GO:0030054 "cell junction" evidence=IEA]
[GO:0034707 "chloride channel complex" evidence=IEA] [GO:0030424
"axon" evidence=IEA] [GO:0045211 "postsynaptic membrane"
evidence=IEA] [GO:0030285 "integral to synaptic vesicle membrane"
evidence=IDA] [GO:0006836 "neurotransmitter transport"
evidence=IMP] [GO:0008503 "benzodiazepine receptor activity"
evidence=IMP] [GO:0007214 "gamma-aminobutyric acid signaling
pathway" evidence=IMP] [GO:0001505 "regulation of neurotransmitter
levels" evidence=IMP] [GO:0005886 "plasma membrane" evidence=TAS]
[GO:0007268 "synaptic transmission" evidence=TAS] [GO:0034220 "ion
transmembrane transport" evidence=TAS] [GO:0055085 "transmembrane
transport" evidence=TAS] Reactome:REACT_13685 Reactome:REACT_15518
InterPro:IPR001390 InterPro:IPR005432 InterPro:IPR006028
InterPro:IPR006029 InterPro:IPR006201 InterPro:IPR006202
InterPro:IPR018000 Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252
PRINTS:PR00253 PRINTS:PR01079 PRINTS:PR01615 PROSITE:PS00236
GO:GO:0005886 GO:GO:0030285 GO:GO:0030054 GO:GO:0045211
GO:GO:0005230 GO:GO:0004890 Gene3D:2.70.170.10 PANTHER:PTHR18945
SUPFAM:SSF90112 SUPFAM:SSF63712 TIGRFAMs:TIGR00860 GO:GO:0030424
GO:GO:0034220 GO:GO:0007214 MIM:103780 GO:GO:0006836 GO:GO:0034707
GO:GO:0005254 DrugBank:DB00186 GO:GO:0001505 DrugBank:DB00829
DrugBank:DB00683 DrugBank:DB01544 DrugBank:DB00404 KO:K05175
eggNOG:NOG238757 HOGENOM:HOG000231337 HOVERGEN:HBG051707
OrthoDB:EOG4ZS935 DrugBank:DB00189 DrugBank:DB00690
DrugBank:DB00371 GO:GO:0008503 CTD:2555 EMBL:S62907 EMBL:AB209295
IPI:IPI00026631 PIR:I57947 RefSeq:NP_000798.2 RefSeq:NP_001107647.1
UniGene:Hs.116250 ProteinModelPortal:P47869 SMR:P47869
IntAct:P47869 STRING:P47869 TCDB:1.A.9.5.2 PhosphoSite:P47869
DMDM:126302547 PaxDb:P47869 PRIDE:P47869 Ensembl:ENST00000356504
Ensembl:ENST00000381620 Ensembl:ENST00000510861
Ensembl:ENST00000514090 GeneID:2555 KEGG:hsa:2555 UCSC:uc003gxc.3
GeneCards:GC04M046167 HGNC:HGNC:4076 HPA:HPA014261 MIM:137140
neXtProt:NX_P47869 PharmGKB:PA28490 InParanoid:P47869
PhylomeDB:P47869 BindingDB:P47869 ChEMBL:CHEMBL4956 ChiTaRS:GABRA2
DrugBank:DB01558 DrugBank:DB01567 GenomeRNAi:2555 NextBio:10091
ArrayExpress:P47869 Bgee:P47869 CleanEx:HS_GABRA2
Genevestigator:P47869 GermOnline:ENSG00000151834 Uniprot:P47869
Length = 451
Score = 222 (83.2 bits), Expect = 9.9e-18, P = 9.9e-18
Identities = 65/206 (31%), Positives = 101/206 (49%)
Query: 6 KLVDIGNLSFQQEFKVQLLLQLHWKDPRLEYRHYAP-HITEMVGERNFIQNIWTPHIYLT 64
++ D G L + VQ +H +D ++ H P + + IWT Y
Sbjct: 147 RIQDDGTLLYTMRLTVQAECPMHLEDFPMD-AHSCPLKFGSYAYTTSEVTYIWT---Y-- 200
Query: 65 NERDSLVLG-----LYRRDMLVSILPDGDMLFSTRSRAYMYSSLTLTFILNRQYGFYLMD 119
N DS+ + L + D+L + + ST Y+ +T F L R+ G++++
Sbjct: 201 NASDSVQVAPDGSRLNQYDLLGQSIGKETIKSSTGE----YTVMTAHFHLKRKIGYFVIQ 256
Query: 120 FYAPSILLVCISWVSFWMAPDAVPGRTILGASTMLTFFQLGIETGSSLPNVSYIRSNDVW 179
Y P I+ V +S VSFW+ ++VP RT+ G +T+LT L I +SLP V+Y + D W
Sbjct: 257 TYLPCIMTVILSQVSFWLNRESVPARTVFGVTTVLTMTTLSISARNSLPKVAYATAMD-W 315
Query: 180 FFA-CTVFIFLSLAEFAFVNTIWRYG 204
F A C F+F +L EFA VN + G
Sbjct: 316 FIAVCYAFVFSALIEFATVNYFTKRG 341
>MGI|MGI:95614 [details] [associations]
symbol:Gabra2 "gamma-aminobutyric acid (GABA) A receptor,
subunit alpha 2" species:10090 "Mus musculus" [GO:0001505
"regulation of neurotransmitter levels" evidence=ISO] [GO:0004890
"GABA-A receptor activity" evidence=IEA] [GO:0005216 "ion channel
activity" evidence=IEA] [GO:0005230 "extracellular ligand-gated ion
channel activity" evidence=IEA] [GO:0005254 "chloride channel
activity" evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0006810 "transport" evidence=IEA] [GO:0006811 "ion transport"
evidence=IEA] [GO:0006821 "chloride transport" evidence=IEA]
[GO:0006836 "neurotransmitter transport" evidence=ISO] [GO:0007214
"gamma-aminobutyric acid signaling pathway" evidence=ISO]
[GO:0008503 "benzodiazepine receptor activity" evidence=ISO]
[GO:0016020 "membrane" evidence=IEA] [GO:0016021 "integral to
membrane" evidence=IEA] [GO:0030054 "cell junction" evidence=IEA]
[GO:0030285 "integral to synaptic vesicle membrane" evidence=ISO]
[GO:0030424 "axon" evidence=IDA] [GO:0034707 "chloride channel
complex" evidence=IEA] [GO:0045202 "synapse" evidence=IEA]
[GO:0045211 "postsynaptic membrane" evidence=IEA]
InterPro:IPR001390 InterPro:IPR005432 InterPro:IPR006028
InterPro:IPR006029 InterPro:IPR006201 InterPro:IPR006202
InterPro:IPR018000 Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252
PRINTS:PR00253 PRINTS:PR01079 PRINTS:PR01615 PROSITE:PS00236
MGI:MGI:95614 GO:GO:0005886 GO:GO:0030285 GO:GO:0030054
GO:GO:0045211 GO:GO:0005230 GO:GO:0004890 Gene3D:2.70.170.10
PANTHER:PTHR18945 SUPFAM:SSF90112 SUPFAM:SSF63712
TIGRFAMs:TIGR00860 GO:GO:0030424 GO:GO:0007214 GO:GO:0006836
GO:GO:0034707 GO:GO:0005254 GO:GO:0001505 KO:K05175
eggNOG:NOG238757 HOGENOM:HOG000231337 HOVERGEN:HBG051707
OrthoDB:EOG4ZS935 GO:GO:0008503 CTD:2555 EMBL:M86567
IPI:IPI00110598 RefSeq:NP_032092.1 UniGene:Mm.5304
ProteinModelPortal:P26048 SMR:P26048 STRING:P26048
PhosphoSite:P26048 PaxDb:P26048 PRIDE:P26048
Ensembl:ENSMUST00000000572 GeneID:14395 KEGG:mmu:14395
InParanoid:P26048 OMA:TTAEPNK BindingDB:P26048 ChEMBL:CHEMBL2705
NextBio:285927 Bgee:P26048 Genevestigator:P26048
GermOnline:ENSMUSG00000000560 Uniprot:P26048
Length = 451
Score = 222 (83.2 bits), Expect = 9.9e-18, P = 9.9e-18
Identities = 65/206 (31%), Positives = 101/206 (49%)
Query: 6 KLVDIGNLSFQQEFKVQLLLQLHWKDPRLEYRHYAP-HITEMVGERNFIQNIWTPHIYLT 64
++ D G L + VQ +H +D ++ H P + + IWT Y
Sbjct: 147 RIQDDGTLLYTMRLTVQAECPMHLEDFPMD-AHSCPLKFGSYAYTTSEVTYIWT---Y-- 200
Query: 65 NERDSLVLG-----LYRRDMLVSILPDGDMLFSTRSRAYMYSSLTLTFILNRQYGFYLMD 119
N DS+ + L + D+L + + ST Y+ +T F L R+ G++++
Sbjct: 201 NASDSVQVAPDGSRLNQYDLLGQSIGKETIKSSTGE----YTVMTAHFHLKRKIGYFVIQ 256
Query: 120 FYAPSILLVCISWVSFWMAPDAVPGRTILGASTMLTFFQLGIETGSSLPNVSYIRSNDVW 179
Y P I+ V +S VSFW+ ++VP RT+ G +T+LT L I +SLP V+Y + D W
Sbjct: 257 TYLPCIMTVILSQVSFWLNRESVPARTVFGVTTVLTMTTLSISARNSLPKVAYATAMD-W 315
Query: 180 FFA-CTVFIFLSLAEFAFVNTIWRYG 204
F A C F+F +L EFA VN + G
Sbjct: 316 FIAVCYAFVFSALIEFATVNYFTKRG 341
>UNIPROTKB|F1LNE8 [details] [associations]
symbol:Gabra2 "Gamma-aminobutyric acid receptor subunit
alpha-2" species:10116 "Rattus norvegicus" [GO:0004890 "GABA-A
receptor activity" evidence=IEA] [GO:0005230 "extracellular
ligand-gated ion channel activity" evidence=IEA] [GO:0005886
"plasma membrane" evidence=IEA] [GO:0006821 "chloride transport"
evidence=IEA] [GO:0007214 "gamma-aminobutyric acid signaling
pathway" evidence=IEA] [GO:0016021 "integral to membrane"
evidence=IEA] [GO:0030054 "cell junction" evidence=IEA] [GO:0045211
"postsynaptic membrane" evidence=IEA] InterPro:IPR001390
InterPro:IPR005432 InterPro:IPR006028 InterPro:IPR006029
InterPro:IPR006201 InterPro:IPR006202 InterPro:IPR018000
Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252 PRINTS:PR00253
PRINTS:PR01079 PRINTS:PR01615 PROSITE:PS00236 RGD:61856
GO:GO:0016021 GO:GO:0005886 GO:GO:0030054 GO:GO:0045211
GO:GO:0005230 GO:GO:0004890 Gene3D:2.70.170.10 PANTHER:PTHR18945
SUPFAM:SSF90112 SUPFAM:SSF63712 TIGRFAMs:TIGR00860 GO:GO:0007214
GO:GO:0006821 GeneTree:ENSGT00550000074441 OMA:TTAEPNK
IPI:IPI00679252 PRIDE:F1LNE8 Ensembl:ENSRNOT00000003197
ArrayExpress:F1LNE8 Uniprot:F1LNE8
Length = 451
Score = 222 (83.2 bits), Expect = 9.9e-18, P = 9.9e-18
Identities = 65/206 (31%), Positives = 101/206 (49%)
Query: 6 KLVDIGNLSFQQEFKVQLLLQLHWKDPRLEYRHYAP-HITEMVGERNFIQNIWTPHIYLT 64
++ D G L + VQ +H +D ++ H P + + IWT Y
Sbjct: 147 RIQDDGTLLYTMRLTVQAECPMHLEDFPMD-AHSCPLKFGSYAYTTSEVTYIWT---Y-- 200
Query: 65 NERDSLVLG-----LYRRDMLVSILPDGDMLFSTRSRAYMYSSLTLTFILNRQYGFYLMD 119
N DS+ + L + D+L + + ST Y+ +T F L R+ G++++
Sbjct: 201 NASDSVQVAPDGSRLNQYDLLGQSIGKETIKSSTGE----YTVMTAHFHLKRKIGYFVIQ 256
Query: 120 FYAPSILLVCISWVSFWMAPDAVPGRTILGASTMLTFFQLGIETGSSLPNVSYIRSNDVW 179
Y P I+ V +S VSFW+ ++VP RT+ G +T+LT L I +SLP V+Y + D W
Sbjct: 257 TYLPCIMTVILSQVSFWLNRESVPARTVFGVTTVLTMTTLSISARNSLPKVAYATAMD-W 315
Query: 180 FFA-CTVFIFLSLAEFAFVNTIWRYG 204
F A C F+F +L EFA VN + G
Sbjct: 316 FIAVCYAFVFSALIEFATVNYFTKRG 341
>UNIPROTKB|F1LMU7 [details] [associations]
symbol:Gabra2 "Gamma-aminobutyric acid receptor subunit
alpha-2" species:10116 "Rattus norvegicus" [GO:0004890 "GABA-A
receptor activity" evidence=IEA] [GO:0005230 "extracellular
ligand-gated ion channel activity" evidence=IEA] [GO:0005886
"plasma membrane" evidence=IEA] [GO:0006821 "chloride transport"
evidence=IEA] [GO:0007214 "gamma-aminobutyric acid signaling
pathway" evidence=IEA] [GO:0016021 "integral to membrane"
evidence=IEA] [GO:0030054 "cell junction" evidence=IEA] [GO:0045211
"postsynaptic membrane" evidence=IEA] InterPro:IPR001390
InterPro:IPR005432 InterPro:IPR006028 InterPro:IPR006029
InterPro:IPR006201 InterPro:IPR006202 InterPro:IPR018000
Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252 PRINTS:PR00253
PRINTS:PR01079 PRINTS:PR01615 PROSITE:PS00236 RGD:61856
GO:GO:0005886 GO:GO:0030285 GO:GO:0030054 GO:GO:0045211
GO:GO:0005230 GO:GO:0004890 Gene3D:2.70.170.10 PANTHER:PTHR18945
SUPFAM:SSF90112 SUPFAM:SSF63712 TIGRFAMs:TIGR00860 GO:GO:0030424
GO:GO:0007214 GO:GO:0006836 GO:GO:0001505 GO:GO:0006821 KO:K05175
GeneTree:ENSGT00550000074441 GO:GO:0008503 CTD:2555 IPI:IPI00950967
UniGene:Rn.48180 RefSeq:NP_001129251.1 ProteinModelPortal:F1LMU7
PRIDE:F1LMU7 Ensembl:ENSRNOT00000064779 GeneID:289606
KEGG:rno:289606 NextBio:630056 ArrayExpress:F1LMU7 Uniprot:F1LMU7
Length = 452
Score = 222 (83.2 bits), Expect = 1.0e-17, P = 1.0e-17
Identities = 65/206 (31%), Positives = 101/206 (49%)
Query: 6 KLVDIGNLSFQQEFKVQLLLQLHWKDPRLEYRHYAP-HITEMVGERNFIQNIWTPHIYLT 64
++ D G L + VQ +H +D ++ H P + + IWT Y
Sbjct: 147 RIQDDGTLLYTMRLTVQAECPMHLEDFPMD-AHSCPLKFGSYAYTTSEVTYIWT---Y-- 200
Query: 65 NERDSLVLG-----LYRRDMLVSILPDGDMLFSTRSRAYMYSSLTLTFILNRQYGFYLMD 119
N DS+ + L + D+L + + ST Y+ +T F L R+ G++++
Sbjct: 201 NASDSVQVAPDGSRLNQYDLLGQSIGKETIKSSTGE----YTVMTAHFHLKRKIGYFVIQ 256
Query: 120 FYAPSILLVCISWVSFWMAPDAVPGRTILGASTMLTFFQLGIETGSSLPNVSYIRSNDVW 179
Y P I+ V +S VSFW+ ++VP RT+ G +T+LT L I +SLP V+Y + D W
Sbjct: 257 TYLPCIMTVILSQVSFWLNRESVPARTVFGVTTVLTMTTLSISARNSLPKVAYATAMD-W 315
Query: 180 FFA-CTVFIFLSLAEFAFVNTIWRYG 204
F A C F+F +L EFA VN + G
Sbjct: 316 FIAVCYAFVFSALIEFATVNYFTKRG 341
>UNIPROTKB|F1MBQ3 [details] [associations]
symbol:GABRR2 "Gamma-aminobutyric acid receptor subunit
rho-2" species:9913 "Bos taurus" [GO:0045211 "postsynaptic
membrane" evidence=IEA] [GO:0030054 "cell junction" evidence=IEA]
[GO:0016021 "integral to membrane" evidence=IEA] [GO:0005886
"plasma membrane" evidence=IEA] [GO:0005230 "extracellular
ligand-gated ion channel activity" evidence=IEA] [GO:0004890
"GABA-A receptor activity" evidence=IEA] InterPro:IPR006028
InterPro:IPR006029 InterPro:IPR006201 InterPro:IPR006202
InterPro:IPR008057 InterPro:IPR008059 InterPro:IPR018000
Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252 PRINTS:PR00253
PRINTS:PR01670 PRINTS:PR01672 PROSITE:PS00236 GO:GO:0016021
GO:GO:0005886 GO:GO:0030054 GO:GO:0045211 GO:GO:0005230
GO:GO:0004890 Gene3D:2.70.170.10 PANTHER:PTHR18945 SUPFAM:SSF90112
SUPFAM:SSF63712 TIGRFAMs:TIGR00860 GeneTree:ENSGT00630000089571
IPI:IPI00694785 EMBL:DAAA02026443 Ensembl:ENSBTAT00000024526
Uniprot:F1MBQ3
Length = 392
Score = 220 (82.5 bits), Expect = 1.0e-17, P = 1.0e-17
Identities = 48/114 (42%), Positives = 68/114 (59%)
Query: 91 FSTRSRAYMYSS------LTLTFILNRQYGFYLMDFYAPSILLVCISWVSFWMAPDAVPG 144
F T SR YSS L + F L R F+L+ Y P+ L+V +SWVSFW+ AVP
Sbjct: 160 FHTTSRLAFYSSTGWYNRLYINFTLRRHIFFFLLQTYFPATLMVMLSWVSFWIDRRAVPA 219
Query: 145 RTILGASTMLTFFQLGIETGSSLPNVSYIRSNDVWFFACTVFIFLSLAEFAFVN 198
R LG +T+LT + +S+P VSYI++ D++ + VF+FLS+ E+A VN
Sbjct: 220 RVSLGITTVLTMSTIITGVNASMPRVSYIKAVDIYLWVSFVFVFLSVLEYAAVN 273
>UNIPROTKB|B7Z1H8 [details] [associations]
symbol:GABRA2 "Gamma-aminobutyric acid receptor subunit
alpha-2" species:9606 "Homo sapiens" [GO:0004890 "GABA-A receptor
activity" evidence=IEA] [GO:0005230 "extracellular ligand-gated ion
channel activity" evidence=IEA] [GO:0006821 "chloride transport"
evidence=IEA] [GO:0007214 "gamma-aminobutyric acid signaling
pathway" evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0016021 "integral to membrane" evidence=IEA] [GO:0030054 "cell
junction" evidence=IEA] [GO:0045211 "postsynaptic membrane"
evidence=IEA] InterPro:IPR001390 InterPro:IPR005432
InterPro:IPR006028 InterPro:IPR006029 InterPro:IPR006201
InterPro:IPR006202 InterPro:IPR018000 Pfam:PF02931 Pfam:PF02932
PRINTS:PR00252 PRINTS:PR00253 PRINTS:PR01079 PRINTS:PR01615
PROSITE:PS00236 GO:GO:0016021 GO:GO:0005886 GO:GO:0030054
GO:GO:0045211 GO:GO:0005230 GO:GO:0004890 Gene3D:2.70.170.10
PANTHER:PTHR18945 SUPFAM:SSF90112 SUPFAM:SSF63712
TIGRFAMs:TIGR00860 GO:GO:0007214 GO:GO:0006821 HOGENOM:HOG000231337
HOVERGEN:HBG051707 UniGene:Hs.116250 HGNC:HGNC:4076 ChiTaRS:GABRA2
EMBL:AC084352 EMBL:AC093745 EMBL:AC095060 EMBL:AC104072
EMBL:AK293466 IPI:IPI00922092 SMR:B7Z1H8 STRING:B7Z1H8
Ensembl:ENST00000540012 UCSC:uc011bzc.1 Uniprot:B7Z1H8
Length = 456
Score = 222 (83.2 bits), Expect = 1.0e-17, P = 1.0e-17
Identities = 65/206 (31%), Positives = 101/206 (49%)
Query: 6 KLVDIGNLSFQQEFKVQLLLQLHWKDPRLEYRHYAP-HITEMVGERNFIQNIWTPHIYLT 64
++ D G L + VQ +H +D ++ H P + + IWT Y
Sbjct: 92 RIQDDGTLLYTMRLTVQAECPMHLEDFPMD-AHSCPLKFGSYAYTTSEVTYIWT---Y-- 145
Query: 65 NERDSLVLG-----LYRRDMLVSILPDGDMLFSTRSRAYMYSSLTLTFILNRQYGFYLMD 119
N DS+ + L + D+L + + ST Y+ +T F L R+ G++++
Sbjct: 146 NASDSVQVAPDGSRLNQYDLLGQSIGKETIKSSTGE----YTVMTAHFHLKRKIGYFVIQ 201
Query: 120 FYAPSILLVCISWVSFWMAPDAVPGRTILGASTMLTFFQLGIETGSSLPNVSYIRSNDVW 179
Y P I+ V +S VSFW+ ++VP RT+ G +T+LT L I +SLP V+Y + D W
Sbjct: 202 TYLPCIMTVILSQVSFWLNRESVPARTVFGVTTVLTMTTLSISARNSLPKVAYATAMD-W 260
Query: 180 FFA-CTVFIFLSLAEFAFVNTIWRYG 204
F A C F+F +L EFA VN + G
Sbjct: 261 FIAVCYAFVFSALIEFATVNYFTKRG 286
>UNIPROTKB|F1ND90 [details] [associations]
symbol:GABRR2 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0005230 "extracellular ligand-gated ion channel
activity" evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0016021 "integral to membrane" evidence=IEA] [GO:0030054 "cell
junction" evidence=IEA] [GO:0045211 "postsynaptic membrane"
evidence=IEA] [GO:0004890 "GABA-A receptor activity" evidence=IEA]
[GO:0007214 "gamma-aminobutyric acid signaling pathway"
evidence=IEA] [GO:0007601 "visual perception" evidence=IEA]
InterPro:IPR006028 InterPro:IPR006029 InterPro:IPR006201
InterPro:IPR006202 InterPro:IPR008059 InterPro:IPR018000
Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252 PRINTS:PR00253
PRINTS:PR01672 PROSITE:PS00236 GO:GO:0016021 GO:GO:0005886
GO:GO:0030054 GO:GO:0045211 GO:GO:0005230 GO:GO:0004890
Gene3D:2.70.170.10 PANTHER:PTHR18945 SUPFAM:SSF90112
SUPFAM:SSF63712 TIGRFAMs:TIGR00860 GO:GO:0007214
GeneTree:ENSGT00630000089571 OMA:GFRIFQN EMBL:AADN02002377
IPI:IPI00593556 Ensembl:ENSGALT00000025443 Uniprot:F1ND90
Length = 436
Score = 221 (82.9 bits), Expect = 1.1e-17, P = 1.1e-17
Identities = 48/114 (42%), Positives = 69/114 (60%)
Query: 91 FSTRSRAYMYSS------LTLTFILNRQYGFYLMDFYAPSILLVCISWVSFWMAPDAVPG 144
F T SR YSS L ++F L R F+L+ Y P+ L+V +SWVSFW+ AVP
Sbjct: 205 FHTTSRLAFYSSTGWYNRLYISFTLRRHIFFFLLQTYFPATLMVMLSWVSFWIDRRAVPA 264
Query: 145 RTILGASTMLTFFQLGIETGSSLPNVSYIRSNDVWFFACTVFIFLSLAEFAFVN 198
R LG +T+LT + +S+P VSYI++ D++ + VF+FLS+ E+A VN
Sbjct: 265 RVSLGITTVLTMSTIITGVNASMPRVSYIKAVDIYLWVSFVFVFLSVLEYAAVN 318
>UNIPROTKB|G5E635 [details] [associations]
symbol:GABRR2 "Gamma-aminobutyric acid receptor subunit
rho-2" species:9913 "Bos taurus" [GO:0007601 "visual perception"
evidence=IEA] [GO:0007214 "gamma-aminobutyric acid signaling
pathway" evidence=IEA] [GO:0004890 "GABA-A receptor activity"
evidence=IEA] [GO:0045211 "postsynaptic membrane" evidence=IEA]
[GO:0030054 "cell junction" evidence=IEA] [GO:0016021 "integral to
membrane" evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0005230 "extracellular ligand-gated ion channel activity"
evidence=IEA] InterPro:IPR006028 InterPro:IPR006029
InterPro:IPR006201 InterPro:IPR006202 InterPro:IPR008057
InterPro:IPR008059 InterPro:IPR018000 Pfam:PF02931 Pfam:PF02932
PRINTS:PR00252 PRINTS:PR00253 PRINTS:PR01670 PRINTS:PR01672
PROSITE:PS00236 GO:GO:0016021 GO:GO:0005886 GO:GO:0030054
GO:GO:0045211 GO:GO:0005230 GO:GO:0004890 Gene3D:2.70.170.10
PANTHER:PTHR18945 SUPFAM:SSF90112 SUPFAM:SSF63712
TIGRFAMs:TIGR00860 GO:GO:0007214 GO:GO:0007601
GeneTree:ENSGT00630000089571 OMA:GFRIFQN EMBL:DAAA02026443
Ensembl:ENSBTAT00000050515 Uniprot:G5E635
Length = 412
Score = 220 (82.5 bits), Expect = 1.2e-17, P = 1.2e-17
Identities = 48/114 (42%), Positives = 68/114 (59%)
Query: 91 FSTRSRAYMYSS------LTLTFILNRQYGFYLMDFYAPSILLVCISWVSFWMAPDAVPG 144
F T SR YSS L + F L R F+L+ Y P+ L+V +SWVSFW+ AVP
Sbjct: 160 FHTTSRLAFYSSTGWYNRLYINFTLRRHIFFFLLQTYFPATLMVMLSWVSFWIDRRAVPA 219
Query: 145 RTILGASTMLTFFQLGIETGSSLPNVSYIRSNDVWFFACTVFIFLSLAEFAFVN 198
R LG +T+LT + +S+P VSYI++ D++ + VF+FLS+ E+A VN
Sbjct: 220 RVSLGITTVLTMSTIITGVNASMPRVSYIKAVDIYLWVSFVFVFLSVLEYAAVN 273
>UNIPROTKB|P19150 [details] [associations]
symbol:GABRA1 "Gamma-aminobutyric acid receptor subunit
alpha-1" species:9031 "Gallus gallus" [GO:0004890 "GABA-A receptor
activity" evidence=IEA] [GO:0005230 "extracellular ligand-gated ion
channel activity" evidence=IEA] [GO:0007214 "gamma-aminobutyric
acid signaling pathway" evidence=IEA] [GO:0005254 "chloride channel
activity" evidence=IEA] [GO:0030054 "cell junction" evidence=IEA]
[GO:0034707 "chloride channel complex" evidence=IEA] [GO:0005886
"plasma membrane" evidence=IEA] [GO:0045211 "postsynaptic membrane"
evidence=IEA] InterPro:IPR001390 InterPro:IPR005431
InterPro:IPR006028 InterPro:IPR006029 InterPro:IPR006201
InterPro:IPR006202 InterPro:IPR018000 Pfam:PF02931 Pfam:PF02932
PRINTS:PR00252 PRINTS:PR00253 PRINTS:PR01079 PRINTS:PR01614
PROSITE:PS00236 GO:GO:0005886 GO:GO:0030054 GO:GO:0045211
GO:GO:0005230 GO:GO:0004890 Gene3D:2.70.170.10 PANTHER:PTHR18945
SUPFAM:SSF90112 SUPFAM:SSF63712 TIGRFAMs:TIGR00860 GO:GO:0007214
GO:GO:0034707 GO:GO:0005254 KO:K05175 CTD:2554 eggNOG:NOG238757
GeneTree:ENSGT00550000074441 HOGENOM:HOG000231337
HOVERGEN:HBG051707 OMA:APNIARD OrthoDB:EOG4ZS935 EMBL:X54244
IPI:IPI00582648 PIR:A60033 RefSeq:NP_989649.1 UniGene:Gga.17167
ProteinModelPortal:P19150 Ensembl:ENSGALT00000002609 GeneID:374214
KEGG:gga:374214 InParanoid:P19150 NextBio:20813718 Uniprot:P19150
Length = 455
Score = 221 (82.9 bits), Expect = 1.3e-17, P = 1.3e-17
Identities = 67/211 (31%), Positives = 101/211 (47%)
Query: 1 MSATSKLVDI---GNLSFQQEFKVQLLLQLHWKDPRLEYRHYAP-HITEMVGERNFIQNI 56
M+ +KL+ I G L + V+ +H +D ++ H P R +
Sbjct: 139 MTMPNKLLRITEDGTLLYTMRLTVRAECPMHLEDFPMDV-HACPLKFGSYAYTRAEVVYE 197
Query: 57 WT--PHIYLTNERDSLVLGLYRRDMLVSILPDGDMLFSTRSRAYMYSSLTLTFILNRQYG 114
WT P + D L Y D+L + G + ST Y +T F L R+ G
Sbjct: 198 WTREPARSVVVAEDGSRLNQY--DLLGQTVDSGIVQSSTGE----YVVMTTHFHLKRKIG 251
Query: 115 FYLMDFYAPSILLVCISWVSFWMAPDAVPGRTILGASTMLTFFQLGIETGSSLPNVSYIR 174
++++ Y P I+ V +S VSFW+ ++VP RT+ G +T+LT L I +SLP V+Y
Sbjct: 252 YFVIQTYLPCIMTVILSQVSFWLNRESVPARTVFGVTTVLTMTTLSISARNSLPKVAYAT 311
Query: 175 SNDVWFFA-CTVFIFLSLAEFAFVNTIWRYG 204
+ D WF A C F+F +L EFA VN + G
Sbjct: 312 AMD-WFIAVCYAFVFSALIEFATVNYFTKRG 341
>MGI|MGI:95613 [details] [associations]
symbol:Gabra1 "gamma-aminobutyric acid (GABA) A receptor,
subunit alpha 1" species:10090 "Mus musculus" [GO:0004890 "GABA-A
receptor activity" evidence=IEA] [GO:0005216 "ion channel activity"
evidence=IEA] [GO:0005230 "extracellular ligand-gated ion channel
activity" evidence=IEA] [GO:0005254 "chloride channel activity"
evidence=IEA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005886 "plasma membrane" evidence=IEA] [GO:0005887 "integral
to plasma membrane" evidence=ISO] [GO:0006810 "transport"
evidence=IEA] [GO:0006811 "ion transport" evidence=IEA] [GO:0006821
"chloride transport" evidence=IEA] [GO:0007214 "gamma-aminobutyric
acid signaling pathway" evidence=IEA] [GO:0008144 "drug binding"
evidence=ISO] [GO:0016020 "membrane" evidence=IEA] [GO:0016021
"integral to membrane" evidence=IEA] [GO:0016917 "GABA receptor
activity" evidence=ISO] [GO:0030054 "cell junction" evidence=IEA]
[GO:0034707 "chloride channel complex" evidence=IEA] [GO:0045202
"synapse" evidence=IEA] [GO:0045211 "postsynaptic membrane"
evidence=IEA] [GO:0051932 "synaptic transmission, GABAergic"
evidence=ISO] InterPro:IPR001390 InterPro:IPR005431
InterPro:IPR006028 InterPro:IPR006029 InterPro:IPR006201
InterPro:IPR006202 InterPro:IPR018000 Pfam:PF02931 Pfam:PF02932
PRINTS:PR00252 PRINTS:PR00253 PRINTS:PR01079 PRINTS:PR01614
PROSITE:PS00236 MGI:MGI:95613 GO:GO:0005887 GO:GO:0008144
GO:GO:0030054 GO:GO:0045211 GO:GO:0005230 GO:GO:0004890
Gene3D:2.70.170.10 PANTHER:PTHR18945 SUPFAM:SSF90112
SUPFAM:SSF63712 TIGRFAMs:TIGR00860 GO:GO:0007214 GO:GO:0034707
GO:GO:0005254 KO:K05175 CTD:2554 eggNOG:NOG238757
HOGENOM:HOG000231337 HOVERGEN:HBG051707 OMA:APNIARD
OrthoDB:EOG4ZS935 EMBL:M86566 EMBL:M63436 EMBL:X61430
IPI:IPI00113772 PIR:A39062 RefSeq:NP_034380.1 UniGene:Mm.439668
ProteinModelPortal:P62812 SMR:P62812 IntAct:P62812 STRING:P62812
PhosphoSite:P62812 PaxDb:P62812 PRIDE:P62812
Ensembl:ENSMUST00000020707 GeneID:14394 KEGG:mmu:14394
InParanoid:P62812 BindingDB:P62812 ChEMBL:CHEMBL3139 NextBio:285923
Bgee:P62812 Genevestigator:P62812 GermOnline:ENSMUSG00000010803
Uniprot:P62812
Length = 455
Score = 221 (82.9 bits), Expect = 1.3e-17, P = 1.3e-17
Identities = 67/211 (31%), Positives = 101/211 (47%)
Query: 1 MSATSKLVDI---GNLSFQQEFKVQLLLQLHWKDPRLEYRHYAP-HITEMVGERNFIQNI 56
M+ +KL+ I G L + V+ +H +D ++ H P R +
Sbjct: 138 MTMPNKLLRITEDGTLLYTMRLTVRAECPMHLEDFPMD-AHACPLKFGSYAYTRAEVVYE 196
Query: 57 WT--PHIYLTNERDSLVLGLYRRDMLVSILPDGDMLFSTRSRAYMYSSLTLTFILNRQYG 114
WT P + D L Y D+L + G + ST Y +T F L R+ G
Sbjct: 197 WTREPARSVVVAEDGSRLNQY--DLLGQTVDSGIVQSSTGE----YVVMTTHFHLKRKIG 250
Query: 115 FYLMDFYAPSILLVCISWVSFWMAPDAVPGRTILGASTMLTFFQLGIETGSSLPNVSYIR 174
++++ Y P I+ V +S VSFW+ ++VP RT+ G +T+LT L I +SLP V+Y
Sbjct: 251 YFVIQTYLPCIMTVILSQVSFWLNRESVPARTVFGVTTVLTMTTLSISARNSLPKVAYAT 310
Query: 175 SNDVWFFA-CTVFIFLSLAEFAFVNTIWRYG 204
+ D WF A C F+F +L EFA VN + G
Sbjct: 311 AMD-WFIAVCYAFVFSALIEFATVNYFTKRG 340
>RGD|61855 [details] [associations]
symbol:Gabra1 "gamma-aminobutyric acid (GABA) A receptor, alpha 1"
species:10116 "Rattus norvegicus" [GO:0004890 "GABA-A receptor
activity" evidence=TAS] [GO:0005237 "inhibitory extracellular
ligand-gated ion channel activity" evidence=TAS] [GO:0005254
"chloride channel activity" evidence=IEA] [GO:0005887 "integral to
plasma membrane" evidence=IDA] [GO:0006821 "chloride transport"
evidence=TAS] [GO:0007214 "gamma-aminobutyric acid signaling
pathway" evidence=TAS] [GO:0008144 "drug binding" evidence=IDA]
[GO:0008503 "benzodiazepine receptor activity" evidence=TAS]
[GO:0016917 "GABA receptor activity" evidence=IDA] [GO:0030054 "cell
junction" evidence=IEA] [GO:0034707 "chloride channel complex"
evidence=IEA] [GO:0045211 "postsynaptic membrane" evidence=IEA]
[GO:0051932 "synaptic transmission, GABAergic" evidence=IDA]
InterPro:IPR001390 InterPro:IPR005431 InterPro:IPR006028
InterPro:IPR006029 InterPro:IPR006201 InterPro:IPR006202
InterPro:IPR018000 Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252
PRINTS:PR00253 PRINTS:PR01079 PRINTS:PR01614 PROSITE:PS00236
RGD:61855 GO:GO:0005887 GO:GO:0008144 GO:GO:0030054 GO:GO:0045211
GO:GO:0004890 Gene3D:2.70.170.10 PANTHER:PTHR18945 SUPFAM:SSF90112
SUPFAM:SSF63712 TIGRFAMs:TIGR00860 GO:GO:0007214 GO:GO:0034707
GO:GO:0005254 GO:GO:0006821 GO:GO:0051932 KO:K05175 CTD:2554
eggNOG:NOG238757 GeneTree:ENSGT00550000074441 HOGENOM:HOG000231337
HOVERGEN:HBG051707 OMA:APNIARD OrthoDB:EOG4ZS935 EMBL:L08490
EMBL:AY574250 EMBL:BC100061 IPI:IPI00192642 PIR:JQ0158
RefSeq:NP_899155.1 UniGene:Rn.28463 ProteinModelPortal:P62813
SMR:P62813 IntAct:P62813 MINT:MINT-3371441 STRING:P62813
PhosphoSite:P62813 PRIDE:P62813 Ensembl:ENSRNOT00000004725
GeneID:29705 KEGG:rno:29705 UCSC:RGD:61855 InParanoid:P62813
BindingDB:P62813 ChEMBL:CHEMBL343 NextBio:610121
Genevestigator:P62813 GermOnline:ENSRNOG00000003512 GO:GO:0008503
GO:GO:0005237 Uniprot:P62813
Length = 455
Score = 221 (82.9 bits), Expect = 1.3e-17, P = 1.3e-17
Identities = 67/211 (31%), Positives = 101/211 (47%)
Query: 1 MSATSKLVDI---GNLSFQQEFKVQLLLQLHWKDPRLEYRHYAP-HITEMVGERNFIQNI 56
M+ +KL+ I G L + V+ +H +D ++ H P R +
Sbjct: 138 MTMPNKLLRITEDGTLLYTMRLTVRAECPMHLEDFPMD-AHACPLKFGSYAYTRAEVVYE 196
Query: 57 WT--PHIYLTNERDSLVLGLYRRDMLVSILPDGDMLFSTRSRAYMYSSLTLTFILNRQYG 114
WT P + D L Y D+L + G + ST Y +T F L R+ G
Sbjct: 197 WTREPARSVVVAEDGSRLNQY--DLLGQTVDSGIVQSSTGE----YVVMTTHFHLKRKIG 250
Query: 115 FYLMDFYAPSILLVCISWVSFWMAPDAVPGRTILGASTMLTFFQLGIETGSSLPNVSYIR 174
++++ Y P I+ V +S VSFW+ ++VP RT+ G +T+LT L I +SLP V+Y
Sbjct: 251 YFVIQTYLPCIMTVILSQVSFWLNRESVPARTVFGVTTVLTMTTLSISARNSLPKVAYAT 310
Query: 175 SNDVWFFA-CTVFIFLSLAEFAFVNTIWRYG 204
+ D WF A C F+F +L EFA VN + G
Sbjct: 311 AMD-WFIAVCYAFVFSALIEFATVNYFTKRG 340
>UNIPROTKB|P08219 [details] [associations]
symbol:GABRA1 "Gamma-aminobutyric acid receptor subunit
alpha-1" species:9913 "Bos taurus" [GO:0045211 "postsynaptic
membrane" evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0034707 "chloride channel complex" evidence=IEA] [GO:0030054
"cell junction" evidence=IEA] [GO:0005254 "chloride channel
activity" evidence=IEA] [GO:0007214 "gamma-aminobutyric acid
signaling pathway" evidence=IEA] [GO:0005230 "extracellular
ligand-gated ion channel activity" evidence=IEA] [GO:0004890
"GABA-A receptor activity" evidence=IEA] InterPro:IPR001390
InterPro:IPR005431 InterPro:IPR006028 InterPro:IPR006029
InterPro:IPR006201 InterPro:IPR006202 InterPro:IPR018000
Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252 PRINTS:PR00253
PRINTS:PR01079 PRINTS:PR01614 PROSITE:PS00236 GO:GO:0005886
GO:GO:0030054 GO:GO:0045211 GO:GO:0005230 GO:GO:0004890
Gene3D:2.70.170.10 PANTHER:PTHR18945 SUPFAM:SSF90112
SUPFAM:SSF63712 TIGRFAMs:TIGR00860 GO:GO:0007214 GO:GO:0034707
GO:GO:0005254 KO:K05175 EMBL:X05717 EMBL:BC114156 IPI:IPI00714377
PIR:A27142 RefSeq:NP_001178048.1 UniGene:Bt.87630
ProteinModelPortal:P08219 PRIDE:P08219 Ensembl:ENSBTAT00000009483
GeneID:780973 KEGG:bta:780973 CTD:2554 eggNOG:NOG238757
GeneTree:ENSGT00550000074441 HOGENOM:HOG000231337
HOVERGEN:HBG051707 InParanoid:P08219 OMA:APNIARD OrthoDB:EOG4ZS935
BindingDB:P08219 ChEMBL:CHEMBL3627 NextBio:20924533 Uniprot:P08219
Length = 456
Score = 221 (82.9 bits), Expect = 1.3e-17, P = 1.3e-17
Identities = 67/211 (31%), Positives = 101/211 (47%)
Query: 1 MSATSKLVDI---GNLSFQQEFKVQLLLQLHWKDPRLEYRHYAP-HITEMVGERNFIQNI 56
M+ +KL+ I G L + V+ +H +D ++ H P R +
Sbjct: 139 MTMPNKLLRITEDGTLLYTMRLTVRAECPMHLEDFPMD-AHACPLKFGSYAYTRAEVVYE 197
Query: 57 WT--PHIYLTNERDSLVLGLYRRDMLVSILPDGDMLFSTRSRAYMYSSLTLTFILNRQYG 114
WT P + D L Y D+L + G + ST Y +T F L R+ G
Sbjct: 198 WTREPARSVVVAEDGSRLNQY--DLLGQTVDSGIVQSSTGE----YVVMTTHFHLKRKIG 251
Query: 115 FYLMDFYAPSILLVCISWVSFWMAPDAVPGRTILGASTMLTFFQLGIETGSSLPNVSYIR 174
++++ Y P I+ V +S VSFW+ ++VP RT+ G +T+LT L I +SLP V+Y
Sbjct: 252 YFVIQTYLPCIMTVILSQVSFWLNRESVPARTVFGVTTVLTMTTLSISARNSLPKVAYAT 311
Query: 175 SNDVWFFA-CTVFIFLSLAEFAFVNTIWRYG 204
+ D WF A C F+F +L EFA VN + G
Sbjct: 312 AMD-WFIAVCYAFVFSALIEFATVNYFTKRG 341
>UNIPROTKB|E2RSP8 [details] [associations]
symbol:GABRA1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0045211 "postsynaptic membrane" evidence=IEA]
[GO:0030054 "cell junction" evidence=IEA] [GO:0016021 "integral to
membrane" evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0007214 "gamma-aminobutyric acid signaling pathway"
evidence=IEA] [GO:0006821 "chloride transport" evidence=IEA]
[GO:0005230 "extracellular ligand-gated ion channel activity"
evidence=IEA] [GO:0004890 "GABA-A receptor activity" evidence=IEA]
InterPro:IPR001390 InterPro:IPR005431 InterPro:IPR006028
InterPro:IPR006029 InterPro:IPR006201 InterPro:IPR006202
InterPro:IPR018000 Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252
PRINTS:PR00253 PRINTS:PR01079 PRINTS:PR01614 PROSITE:PS00236
GO:GO:0016021 GO:GO:0005886 GO:GO:0030054 GO:GO:0045211
GO:GO:0005230 GO:GO:0004890 Gene3D:2.70.170.10 PANTHER:PTHR18945
SUPFAM:SSF90112 SUPFAM:SSF63712 TIGRFAMs:TIGR00860 GO:GO:0007214
GO:GO:0006821 KO:K05175 CTD:2554 GeneTree:ENSGT00550000074441
OMA:APNIARD EMBL:AAEX03003042 RefSeq:XP_546261.2
ProteinModelPortal:E2RSP8 Ensembl:ENSCAFT00000027295 GeneID:489143
KEGG:cfa:489143 NextBio:20862355 Uniprot:E2RSP8
Length = 456
Score = 221 (82.9 bits), Expect = 1.3e-17, P = 1.3e-17
Identities = 67/211 (31%), Positives = 101/211 (47%)
Query: 1 MSATSKLVDI---GNLSFQQEFKVQLLLQLHWKDPRLEYRHYAP-HITEMVGERNFIQNI 56
M+ +KL+ I G L + V+ +H +D ++ H P R +
Sbjct: 139 MTMPNKLLRITEDGTLLYTMRLTVRAECPMHLEDFPMD-AHACPLKFGSYAYTRAEVVYE 197
Query: 57 WT--PHIYLTNERDSLVLGLYRRDMLVSILPDGDMLFSTRSRAYMYSSLTLTFILNRQYG 114
WT P + D L Y D+L + G + ST Y +T F L R+ G
Sbjct: 198 WTREPARSVVVAEDGSRLNQY--DLLGQTVDSGIVQSSTGE----YVVMTTHFHLKRKIG 251
Query: 115 FYLMDFYAPSILLVCISWVSFWMAPDAVPGRTILGASTMLTFFQLGIETGSSLPNVSYIR 174
++++ Y P I+ V +S VSFW+ ++VP RT+ G +T+LT L I +SLP V+Y
Sbjct: 252 YFVIQTYLPCIMTVILSQVSFWLNRESVPARTVFGVTTVLTMTTLSISARNSLPKVAYAT 311
Query: 175 SNDVWFFA-CTVFIFLSLAEFAFVNTIWRYG 204
+ D WF A C F+F +L EFA VN + G
Sbjct: 312 AMD-WFIAVCYAFVFSALIEFATVNYFTKRG 341
>UNIPROTKB|P14867 [details] [associations]
symbol:GABRA1 "Gamma-aminobutyric acid receptor subunit
alpha-1" species:9606 "Homo sapiens" [GO:0004890 "GABA-A receptor
activity" evidence=IEA] [GO:0005230 "extracellular ligand-gated ion
channel activity" evidence=IEA] [GO:0007214 "gamma-aminobutyric
acid signaling pathway" evidence=IEA] [GO:0005254 "chloride channel
activity" evidence=IEA] [GO:0030054 "cell junction" evidence=IEA]
[GO:0034707 "chloride channel complex" evidence=IEA] [GO:0045211
"postsynaptic membrane" evidence=IEA] [GO:0006810 "transport"
evidence=TAS] [GO:0005886 "plasma membrane" evidence=TAS]
[GO:0007268 "synaptic transmission" evidence=TAS] [GO:0034220 "ion
transmembrane transport" evidence=TAS] [GO:0055085 "transmembrane
transport" evidence=TAS] [GO:0051932 "synaptic transmission,
GABAergic" evidence=ISS] [GO:0008144 "drug binding" evidence=ISS]
[GO:0016917 "GABA receptor activity" evidence=ISS] [GO:0005887
"integral to plasma membrane" evidence=ISS] Reactome:REACT_13685
Reactome:REACT_15518 InterPro:IPR001390 InterPro:IPR005431
InterPro:IPR006028 InterPro:IPR006029 InterPro:IPR006201
InterPro:IPR006202 InterPro:IPR018000 Pfam:PF02931 Pfam:PF02932
PRINTS:PR00252 PRINTS:PR00253 PRINTS:PR01079 PRINTS:PR01614
PROSITE:PS00236 GO:GO:0005887 EMBL:CH471062 GO:GO:0008144
GO:GO:0030054 GO:GO:0045211 GO:GO:0005230 GO:GO:0004890
Gene3D:2.70.170.10 PANTHER:PTHR18945 SUPFAM:SSF90112
SUPFAM:SSF63712 TIGRFAMs:TIGR00860 GO:GO:0034220 GO:GO:0007214
DrugBank:DB00962 DrugBank:DB01068 DrugBank:DB01159 DrugBank:DB00842
DrugBank:DB00818 GO:GO:0034707 GO:GO:0005254 DrugBank:DB00186
DrugBank:DB01189 DrugBank:DB00228 DrugBank:DB00753 DrugBank:DB01028
DrugBank:DB01236 Orphanet:64280 Orphanet:307 DrugBank:DB00273
GO:GO:0051932 DrugBank:DB00292 DrugBank:DB00466 DrugBank:DB00475
DrugBank:DB00829 DrugBank:DB00241 DrugBank:DB00849 DrugBank:DB00683
DrugBank:DB00349 DrugBank:DB01174 DrugBank:DB00794 DrugBank:DB00898
DrugBank:DB01355 DrugBank:DB00404 DrugBank:DB00425 DrugBank:DB00599
KO:K05175 DrugBank:DB00837 CTD:2554 eggNOG:NOG238757
HOGENOM:HOG000231337 HOVERGEN:HBG051707 OMA:APNIARD
OrthoDB:EOG4ZS935 EMBL:X14766 EMBL:BC030696 EMBL:X13584
IPI:IPI00295235 PIR:A31588 PIR:A60652 RefSeq:NP_000797.2
RefSeq:NP_001121115.1 RefSeq:NP_001121116.1 RefSeq:NP_001121117.1
RefSeq:NP_001121118.1 RefSeq:NP_001121119.1 RefSeq:NP_001121120.1
UniGene:Hs.175934 ProteinModelPortal:P14867 SMR:P14867
IntAct:P14867 STRING:P14867 PhosphoSite:P14867 DMDM:27808653
PRIDE:P14867 DNASU:2554 Ensembl:ENST00000023897
Ensembl:ENST00000393943 Ensembl:ENST00000420560
Ensembl:ENST00000428797 Ensembl:ENST00000437025
Ensembl:ENST00000444819 GeneID:2554 KEGG:hsa:2554 UCSC:uc003lyx.4
GeneCards:GC05P161206 HGNC:HGNC:4075 HPA:CAB001963 HPA:CAB022502
MIM:137160 MIM:611136 neXtProt:NX_P14867 PharmGKB:PA28489
InParanoid:P14867 PhylomeDB:P14867 BindingDB:P14867
ChEMBL:CHEMBL1962 DrugBank:DB00237 DrugBank:DB01353
DrugBank:DB00628 DrugBank:DB00189 DrugBank:DB01205 DrugBank:DB00690
DrugBank:DB00801 DrugBank:DB00371 DrugBank:DB00463 DrugBank:DB00474
DrugBank:DB01107 DrugBank:DB01595 DrugBank:DB00312 DrugBank:DB01588
DrugBank:DB01589 DrugBank:DB00418 DrugBank:DB00306 DrugBank:DB01154
GenomeRNAi:2554 NextBio:10087 ArrayExpress:P14867 Bgee:P14867
CleanEx:HS_GABRA1 Genevestigator:P14867 GermOnline:ENSG00000022355
Uniprot:P14867
Length = 456
Score = 221 (82.9 bits), Expect = 1.3e-17, P = 1.3e-17
Identities = 67/211 (31%), Positives = 101/211 (47%)
Query: 1 MSATSKLVDI---GNLSFQQEFKVQLLLQLHWKDPRLEYRHYAP-HITEMVGERNFIQNI 56
M+ +KL+ I G L + V+ +H +D ++ H P R +
Sbjct: 139 MTMPNKLLRITEDGTLLYTMRLTVRAECPMHLEDFPMD-AHACPLKFGSYAYTRAEVVYE 197
Query: 57 WT--PHIYLTNERDSLVLGLYRRDMLVSILPDGDMLFSTRSRAYMYSSLTLTFILNRQYG 114
WT P + D L Y D+L + G + ST Y +T F L R+ G
Sbjct: 198 WTREPARSVVVAEDGSRLNQY--DLLGQTVDSGIVQSSTGE----YVVMTTHFHLKRKIG 251
Query: 115 FYLMDFYAPSILLVCISWVSFWMAPDAVPGRTILGASTMLTFFQLGIETGSSLPNVSYIR 174
++++ Y P I+ V +S VSFW+ ++VP RT+ G +T+LT L I +SLP V+Y
Sbjct: 252 YFVIQTYLPCIMTVILSQVSFWLNRESVPARTVFGVTTVLTMTTLSISARNSLPKVAYAT 311
Query: 175 SNDVWFFA-CTVFIFLSLAEFAFVNTIWRYG 204
+ D WF A C F+F +L EFA VN + G
Sbjct: 312 AMD-WFIAVCYAFVFSALIEFATVNYFTKRG 341
>UNIPROTKB|F1RR71 [details] [associations]
symbol:LOC100516706 "Uncharacterized protein" species:9823
"Sus scrofa" [GO:0045211 "postsynaptic membrane" evidence=IEA]
[GO:0030054 "cell junction" evidence=IEA] [GO:0016021 "integral to
membrane" evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0007214 "gamma-aminobutyric acid signaling pathway"
evidence=IEA] [GO:0006821 "chloride transport" evidence=IEA]
[GO:0005230 "extracellular ligand-gated ion channel activity"
evidence=IEA] [GO:0004890 "GABA-A receptor activity" evidence=IEA]
InterPro:IPR001390 InterPro:IPR005431 InterPro:IPR006028
InterPro:IPR006029 InterPro:IPR006201 InterPro:IPR006202
InterPro:IPR018000 Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252
PRINTS:PR00253 PRINTS:PR01079 PRINTS:PR01614 PROSITE:PS00236
GO:GO:0016021 GO:GO:0005886 GO:GO:0030054 GO:GO:0045211
GO:GO:0005230 GO:GO:0004890 Gene3D:2.70.170.10 PANTHER:PTHR18945
SUPFAM:SSF90112 SUPFAM:SSF63712 TIGRFAMs:TIGR00860 GO:GO:0007214
GO:GO:0006821 KO:K05175 GeneTree:ENSGT00550000074441 EMBL:CU640458
RefSeq:XP_003134137.3 Ensembl:ENSSSCT00000018538 GeneID:100516706
KEGG:ssc:100516706 OMA:NALAGKX Uniprot:F1RR71
Length = 456
Score = 221 (82.9 bits), Expect = 1.3e-17, P = 1.3e-17
Identities = 67/211 (31%), Positives = 101/211 (47%)
Query: 1 MSATSKLVDI---GNLSFQQEFKVQLLLQLHWKDPRLEYRHYAP-HITEMVGERNFIQNI 56
M+ +KL+ I G L + V+ +H +D ++ H P R +
Sbjct: 139 MTMPNKLLRITEDGTLLYTMRLTVRAECPMHLEDFPMD-AHACPLKFGSYAYTRAEVVYE 197
Query: 57 WT--PHIYLTNERDSLVLGLYRRDMLVSILPDGDMLFSTRSRAYMYSSLTLTFILNRQYG 114
WT P + D L Y D+L + G + ST Y +T F L R+ G
Sbjct: 198 WTREPARSVVVAEDGSRLNQY--DLLGQTVDSGIVQSSTGE----YVVMTTHFHLKRKIG 251
Query: 115 FYLMDFYAPSILLVCISWVSFWMAPDAVPGRTILGASTMLTFFQLGIETGSSLPNVSYIR 174
++++ Y P I+ V +S VSFW+ ++VP RT+ G +T+LT L I +SLP V+Y
Sbjct: 252 YFVIQTYLPCIMTVILSQVSFWLNRESVPARTVFGVTTVLTMTTLSISARNSLPKVAYAT 311
Query: 175 SNDVWFFA-CTVFIFLSLAEFAFVNTIWRYG 204
+ D WF A C F+F +L EFA VN + G
Sbjct: 312 AMD-WFIAVCYAFVFSALIEFATVNYFTKRG 341
>UNIPROTKB|E9PBQ7 [details] [associations]
symbol:GABRA2 "Gamma-aminobutyric acid receptor subunit
alpha-2" species:9606 "Homo sapiens" [GO:0004890 "GABA-A receptor
activity" evidence=IEA] [GO:0005230 "extracellular ligand-gated ion
channel activity" evidence=IEA] [GO:0006821 "chloride transport"
evidence=IEA] [GO:0007214 "gamma-aminobutyric acid signaling
pathway" evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0016021 "integral to membrane" evidence=IEA] [GO:0030054 "cell
junction" evidence=IEA] [GO:0045211 "postsynaptic membrane"
evidence=IEA] InterPro:IPR001390 InterPro:IPR005432
InterPro:IPR006028 InterPro:IPR006029 InterPro:IPR006201
InterPro:IPR006202 InterPro:IPR018000 Pfam:PF02931 Pfam:PF02932
PRINTS:PR00252 PRINTS:PR00253 PRINTS:PR01079 PRINTS:PR01615
PROSITE:PS00236 GO:GO:0016021 GO:GO:0005886 GO:GO:0030054
GO:GO:0045211 GO:GO:0005230 GO:GO:0004890 Gene3D:2.70.170.10
PANTHER:PTHR18945 SUPFAM:SSF90112 SUPFAM:SSF63712
TIGRFAMs:TIGR00860 GO:GO:0007214 GO:GO:0006821 HGNC:HGNC:4076
ChiTaRS:GABRA2 OMA:TTAEPNK EMBL:AC084352 EMBL:AC093745
EMBL:AC095060 EMBL:AC104072 IPI:IPI00922092
ProteinModelPortal:E9PBQ7 SMR:E9PBQ7 Ensembl:ENST00000507069
ArrayExpress:E9PBQ7 Bgee:E9PBQ7 Uniprot:E9PBQ7
Length = 511
Score = 222 (83.2 bits), Expect = 1.4e-17, P = 1.4e-17
Identities = 65/206 (31%), Positives = 101/206 (49%)
Query: 6 KLVDIGNLSFQQEFKVQLLLQLHWKDPRLEYRHYAP-HITEMVGERNFIQNIWTPHIYLT 64
++ D G L + VQ +H +D ++ H P + + IWT Y
Sbjct: 147 RIQDDGTLLYTMRLTVQAECPMHLEDFPMD-AHSCPLKFGSYAYTTSEVTYIWT---Y-- 200
Query: 65 NERDSLVLG-----LYRRDMLVSILPDGDMLFSTRSRAYMYSSLTLTFILNRQYGFYLMD 119
N DS+ + L + D+L + + ST Y+ +T F L R+ G++++
Sbjct: 201 NASDSVQVAPDGSRLNQYDLLGQSIGKETIKSSTGE----YTVMTAHFHLKRKIGYFVIQ 256
Query: 120 FYAPSILLVCISWVSFWMAPDAVPGRTILGASTMLTFFQLGIETGSSLPNVSYIRSNDVW 179
Y P I+ V +S VSFW+ ++VP RT+ G +T+LT L I +SLP V+Y + D W
Sbjct: 257 TYLPCIMTVILSQVSFWLNRESVPARTVFGVTTVLTMTTLSISARNSLPKVAYATAMD-W 315
Query: 180 FFA-CTVFIFLSLAEFAFVNTIWRYG 204
F A C F+F +L EFA VN + G
Sbjct: 316 FIAVCYAFVFSALIEFATVNYFTKRG 341
>MGI|MGI:95626 [details] [associations]
symbol:Gabrr2 "gamma-aminobutyric acid (GABA) C receptor,
subunit rho 2" species:10090 "Mus musculus" [GO:0004890 "GABA-A
receptor activity" evidence=ISO;IMP] [GO:0005216 "ion channel
activity" evidence=IEA] [GO:0005230 "extracellular ligand-gated ion
channel activity" evidence=IEA] [GO:0005254 "chloride channel
activity" evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0006810 "transport" evidence=IEA] [GO:0006811 "ion transport"
evidence=IEA] [GO:0006821 "chloride transport" evidence=TAS]
[GO:0007214 "gamma-aminobutyric acid signaling pathway"
evidence=IMP] [GO:0007601 "visual perception" evidence=IMP]
[GO:0016020 "membrane" evidence=IEA] [GO:0016021 "integral to
membrane" evidence=IEA] [GO:0019904 "protein domain specific
binding" evidence=ISO] [GO:0030054 "cell junction" evidence=IEA]
[GO:0030424 "axon" evidence=TAS] [GO:0034707 "chloride channel
complex" evidence=IEA] [GO:0042462 "eye photoreceptor cell
development" evidence=IMP] [GO:0045202 "synapse" evidence=IEA]
[GO:0045211 "postsynaptic membrane" evidence=IEA]
InterPro:IPR006028 InterPro:IPR006029 InterPro:IPR006201
InterPro:IPR006202 InterPro:IPR008057 InterPro:IPR008059
InterPro:IPR018000 Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252
PRINTS:PR00253 PRINTS:PR01670 PRINTS:PR01672 PROSITE:PS00236
MGI:MGI:95626 GO:GO:0005886 GO:GO:0030054 GO:GO:0045211
GO:GO:0005230 GO:GO:0004890 Gene3D:2.70.170.10 PANTHER:PTHR18945
SUPFAM:SSF90112 SUPFAM:SSF63712 TIGRFAMs:TIGR00860 GO:GO:0030424
GO:GO:0007214 GO:GO:0007601 EMBL:CH466538 GO:GO:0034707
GO:GO:0005254 GO:GO:0006821 HOVERGEN:HBG051707 eggNOG:NOG77438
HOGENOM:HOG000231335 GeneTree:ENSGT00630000089571 KO:K05190
OrthoDB:EOG4RJG1G CTD:2570 OMA:GFRIFQN EMBL:AF024621 EMBL:BC057957
IPI:IPI00113786 RefSeq:NP_032102.2 UniGene:Mm.6227
ProteinModelPortal:P56476 STRING:P56476 PhosphoSite:P56476
PRIDE:P56476 Ensembl:ENSMUST00000024035 Ensembl:ENSMUST00000108162
GeneID:14409 KEGG:mmu:14409 InParanoid:Q6PEP0 ChEMBL:CHEMBL2220
NextBio:285985 Bgee:P56476 Genevestigator:P56476
GermOnline:ENSMUSG00000023267 Uniprot:P56476
Length = 465
Score = 221 (82.9 bits), Expect = 1.4e-17, P = 1.4e-17
Identities = 49/114 (42%), Positives = 67/114 (58%)
Query: 91 FSTRSRAYMYSS------LTLTFILNRQYGFYLMDFYAPSILLVCISWVSFWMAPDAVPG 144
F T SR YSS L + F L R F+L+ Y P+ L+V +SWVSFW+ AVP
Sbjct: 233 FHTTSRLAFYSSTGWYNRLYINFTLRRHIFFFLLQTYFPATLMVMLSWVSFWIDHRAVPA 292
Query: 145 RTILGASTMLTFFQLGIETGSSLPNVSYIRSNDVWFFACTVFIFLSLAEFAFVN 198
R LG T+LT + +S+P VSYIR+ D++ + VF+FLS+ E+A VN
Sbjct: 293 RVSLGIMTVLTMSTIITGVNASMPRVSYIRAVDIYLWVSFVFVFLSVLEYAAVN 346
>RGD|61902 [details] [associations]
symbol:Gabrr2 "gamma-aminobutyric acid (GABA) A receptor, rho 2"
species:10116 "Rattus norvegicus" [GO:0004890 "GABA-A receptor
activity" evidence=ISO;IDA] [GO:0005237 "inhibitory extracellular
ligand-gated ion channel activity" evidence=TAS] [GO:0005254
"chloride channel activity" evidence=TAS] [GO:0005886 "plasma
membrane" evidence=IEA] [GO:0007214 "gamma-aminobutyric acid
signaling pathway" evidence=IEA;ISO] [GO:0007601 "visual perception"
evidence=IEA;ISO] [GO:0019904 "protein domain specific binding"
evidence=IPI] [GO:0030054 "cell junction" evidence=IEA] [GO:0034707
"chloride channel complex" evidence=IEA] [GO:0045211 "postsynaptic
membrane" evidence=IEA] [GO:0042462 "eye photoreceptor cell
development" evidence=ISO] InterPro:IPR006028 InterPro:IPR006029
InterPro:IPR006201 InterPro:IPR006202 InterPro:IPR008057
InterPro:IPR008059 InterPro:IPR018000 Pfam:PF02931 Pfam:PF02932
PRINTS:PR00252 PRINTS:PR00253 PRINTS:PR01670 PRINTS:PR01672
PROSITE:PS00236 RGD:61902 GO:GO:0005886 GO:GO:0030054 GO:GO:0045211
GO:GO:0004890 Gene3D:2.70.170.10 PANTHER:PTHR18945 SUPFAM:SSF90112
SUPFAM:SSF63712 TIGRFAMs:TIGR00860 GO:GO:0007214 GO:GO:0007601
GO:GO:0034707 GO:GO:0005254 HOVERGEN:HBG051707 GO:GO:0005237
eggNOG:NOG77438 HOGENOM:HOG000231335 GeneTree:ENSGT00630000089571
KO:K05190 OrthoDB:EOG4RJG1G CTD:2570 EMBL:D38494 IPI:IPI00231130
PIR:I56523 RefSeq:NP_058988.1 UniGene:Rn.48659 STRING:P47742
Ensembl:ENSRNOT00000009973 GeneID:29695 KEGG:rno:29695
UCSC:RGD:61902 InParanoid:P47742 OMA:KIRTGKP BindingDB:P47742
ChEMBL:CHEMBL2953 NextBio:610094 Genevestigator:P47742
GermOnline:ENSRNOG00000007490 Uniprot:P47742
Length = 465
Score = 221 (82.9 bits), Expect = 1.4e-17, P = 1.4e-17
Identities = 49/114 (42%), Positives = 67/114 (58%)
Query: 91 FSTRSRAYMYSS------LTLTFILNRQYGFYLMDFYAPSILLVCISWVSFWMAPDAVPG 144
F T SR YSS L + F L R F+L+ Y P+ L+V +SWVSFW+ AVP
Sbjct: 233 FHTTSRLAFYSSTGWYNRLYINFTLRRHIFFFLLQTYFPATLMVMLSWVSFWIDHRAVPA 292
Query: 145 RTILGASTMLTFFQLGIETGSSLPNVSYIRSNDVWFFACTVFIFLSLAEFAFVN 198
R LG T+LT + +S+P VSYIR+ D++ + VF+FLS+ E+A VN
Sbjct: 293 RVSLGIMTVLTMSTIITGVNASMPRVSYIRAVDIYLWVSFVFVFLSVLEYAAVN 346
>ZFIN|ZDB-GENE-080722-20 [details] [associations]
symbol:zgc:194845 "zgc:194845" species:7955 "Danio
rerio" [GO:0045211 "postsynaptic membrane" evidence=IEA]
[GO:0006810 "transport" evidence=IEA] [GO:0006811 "ion transport"
evidence=IEA] [GO:0016020 "membrane" evidence=IEA] [GO:0016021
"integral to membrane" evidence=IEA] [GO:0005230 "extracellular
ligand-gated ion channel activity" evidence=IEA] [GO:0030054 "cell
junction" evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0045202 "synapse" evidence=IEA] InterPro:IPR006028
InterPro:IPR006029 InterPro:IPR006201 InterPro:IPR006202
InterPro:IPR018000 Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252
PRINTS:PR00253 PROSITE:PS00236 ZFIN:ZDB-GENE-080722-20
GO:GO:0016021 GO:GO:0005886 GO:GO:0030054 GO:GO:0045211
GO:GO:0005230 Gene3D:2.70.170.10 PANTHER:PTHR18945 SUPFAM:SSF90112
SUPFAM:SSF63712 TIGRFAMs:TIGR00860 HOVERGEN:HBG051707
eggNOG:NOG77438 HOGENOM:HOG000231335 GeneTree:ENSGT00630000089571
KO:K05190 OrthoDB:EOG41G343 EMBL:CR376845 EMBL:CR925774
EMBL:BC163099 EMBL:BC163103 IPI:IPI00502511 RefSeq:NP_001122232.1
UniGene:Dr.116763 Ensembl:ENSDART00000048430 GeneID:570876
KEGG:dre:570876 OMA:YLRHYWQ NextBio:20890333 Uniprot:B3DIE5
Length = 472
Score = 221 (82.9 bits), Expect = 1.5e-17, P = 1.5e-17
Identities = 41/99 (41%), Positives = 66/99 (66%)
Query: 100 YSSLTLTFILNRQYGFYLMDFYAPSILLVCISWVSFWMAPDAVPGRTILGASTMLTFFQL 159
Y+ L + FIL R F+++ Y P++L+V +SWVSFW+ AVP R LG +T+LT +
Sbjct: 259 YNRLYINFILRRHIFFFMLQTYFPTMLMVMLSWVSFWIDRRAVPARVSLGITTVLTMSTI 318
Query: 160 GIETGSSLPNVSYIRSNDVWFFACTVFIFLSLAEFAFVN 198
+S+P VSY+++ D++ +A +F+FLS+ E+A VN
Sbjct: 319 ITGVSASMPQVSYVKAVDIYLWASFLFVFLSVIEYAAVN 357
>WB|WBGene00009790 [details] [associations]
symbol:lgc-44 species:6239 "Caenorhabditis elegans"
[GO:0006811 "ion transport" evidence=IEA] [GO:0016021 "integral to
membrane" evidence=IEA] [GO:0016020 "membrane" evidence=IEA]
[GO:0005230 "extracellular ligand-gated ion channel activity"
evidence=IEA] [GO:0006810 "transport" evidence=IEA]
InterPro:IPR006028 InterPro:IPR006029 InterPro:IPR006201
InterPro:IPR006202 Pfam:PF02931 Pfam:PF02932 PRINTS:PR00253
GO:GO:0016021 GO:GO:0005886 GO:GO:0005230 Gene3D:2.70.170.10
PANTHER:PTHR18945 SUPFAM:SSF90112 SUPFAM:SSF63712
GeneTree:ENSGT00540000070314 KO:K05397 EMBL:Z81085 PIR:T22315
RefSeq:NP_505954.2 ProteinModelPortal:P90876 SMR:P90876
PaxDb:P90876 EnsemblMetazoa:F46F3.2 GeneID:179600
KEGG:cel:CELE_F46F3.2 UCSC:F46F3.2 CTD:179600 WormBase:F46F3.2
eggNOG:NOG309025 HOGENOM:HOG000022498 InParanoid:P90876 OMA:HIANTYI
NextBio:906102 Uniprot:P90876
Length = 618
Score = 171 (65.3 bits), Expect = 1.5e-17, Sum P(2) = 1.5e-17
Identities = 29/95 (30%), Positives = 53/95 (55%)
Query: 99 MYSSLTLTFILNRQYGFYLMDFYAPSILLVCISWVSFWMAPDAVPGRTILGASTMLTFFQ 158
+YS L F ++R+ G+++ + Y P+ + V SW+S W+ + V GR + + LT
Sbjct: 443 VYSCLEAKFYMHREVGYHIANTYIPTAICVVFSWISVWLPEEFVEGRIFVSLTVFLTLSA 502
Query: 159 LGIETGSSLPNVSYIRSNDVWFFACTVFIFLSLAE 193
LP VSY+++ D+WF + F+FL++ +
Sbjct: 503 ENNSAKEELPKVSYVKAIDIWFGFTSTFVFLTMLQ 537
Score = 77 (32.2 bits), Expect = 1.5e-17, Sum P(2) = 1.5e-17
Identities = 19/77 (24%), Positives = 35/77 (45%)
Query: 18 EFKVQLLLQLHWKDPRLEYRHYAPHITEMVGERNFIQNIWTPHIYLTNERDSLVLGLYRR 77
++ + +++ W DPRL + P + V + F++ IW P TN + S +
Sbjct: 293 DYDLDAWVRMSWIDPRLRHDLSRPIL---VNDYTFLKMIWRPDPIFTNSKYSTFHKVTYL 349
Query: 78 DMLVSILPDGDMLFSTR 94
+ + I PDG + R
Sbjct: 350 NFYLFIFPDGKIFMDMR 366
>UNIPROTKB|Q0II76 [details] [associations]
symbol:GABRR2 "Gamma-aminobutyric acid receptor subunit
rho-2" species:9913 "Bos taurus" [GO:0045211 "postsynaptic
membrane" evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0034707 "chloride channel complex" evidence=IEA] [GO:0030054
"cell junction" evidence=IEA] [GO:0005254 "chloride channel
activity" evidence=IEA] [GO:0005230 "extracellular ligand-gated ion
channel activity" evidence=IEA] [GO:0004890 "GABA-A receptor
activity" evidence=IEA] InterPro:IPR006028 InterPro:IPR006029
InterPro:IPR006201 InterPro:IPR006202 InterPro:IPR008057
InterPro:IPR008059 InterPro:IPR018000 Pfam:PF02931 Pfam:PF02932
PRINTS:PR00252 PRINTS:PR00253 PRINTS:PR01670 PRINTS:PR01672
PROSITE:PS00236 GO:GO:0005886 GO:GO:0030054 GO:GO:0045211
GO:GO:0005230 GO:GO:0004890 Gene3D:2.70.170.10 PANTHER:PTHR18945
SUPFAM:SSF90112 SUPFAM:SSF63712 TIGRFAMs:TIGR00860 GO:GO:0034707
GO:GO:0005254 HOVERGEN:HBG051707 eggNOG:NOG77438
HOGENOM:HOG000231335 KO:K05190 OrthoDB:EOG4RJG1G EMBL:BC122770
IPI:IPI00694785 RefSeq:NP_001071414.2 UniGene:Bt.74488
GeneID:522099 KEGG:bta:522099 CTD:2570 InParanoid:Q0II76
NextBio:20873445 Uniprot:Q0II76
Length = 465
Score = 220 (82.5 bits), Expect = 1.8e-17, P = 1.8e-17
Identities = 48/114 (42%), Positives = 68/114 (59%)
Query: 91 FSTRSRAYMYSS------LTLTFILNRQYGFYLMDFYAPSILLVCISWVSFWMAPDAVPG 144
F T SR YSS L + F L R F+L+ Y P+ L+V +SWVSFW+ AVP
Sbjct: 233 FHTTSRLAFYSSTGWYNRLYINFTLRRHIFFFLLQTYFPATLMVMLSWVSFWIDRRAVPA 292
Query: 145 RTILGASTMLTFFQLGIETGSSLPNVSYIRSNDVWFFACTVFIFLSLAEFAFVN 198
R LG +T+LT + +S+P VSYI++ D++ + VF+FLS+ E+A VN
Sbjct: 293 RVSLGITTVLTMSTIITGVNASMPRVSYIKAVDIYLWVSFVFVFLSVLEYAAVN 346
>UNIPROTKB|I3LKA9 [details] [associations]
symbol:GABRR2 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0007601 "visual perception" evidence=IEA] [GO:0007214
"gamma-aminobutyric acid signaling pathway" evidence=IEA]
[GO:0004890 "GABA-A receptor activity" evidence=IEA] [GO:0045211
"postsynaptic membrane" evidence=IEA] [GO:0030054 "cell junction"
evidence=IEA] [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0005886 "plasma membrane" evidence=IEA] [GO:0005230
"extracellular ligand-gated ion channel activity" evidence=IEA]
InterPro:IPR006028 InterPro:IPR006029 InterPro:IPR006201
InterPro:IPR006202 InterPro:IPR008057 InterPro:IPR008059
InterPro:IPR018000 Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252
PRINTS:PR00253 PRINTS:PR01670 PRINTS:PR01672 PROSITE:PS00236
GO:GO:0016021 GO:GO:0005886 GO:GO:0030054 GO:GO:0045211
GO:GO:0005230 GO:GO:0004890 Gene3D:2.70.170.10 PANTHER:PTHR18945
SUPFAM:SSF90112 SUPFAM:SSF63712 TIGRFAMs:TIGR00860 GO:GO:0007214
GO:GO:0007601 GeneTree:ENSGT00630000089571 OMA:GFRIFQN
EMBL:CU075926 Ensembl:ENSSSCT00000028234 Uniprot:I3LKA9
Length = 488
Score = 220 (82.5 bits), Expect = 2.0e-17, P = 2.0e-17
Identities = 48/114 (42%), Positives = 68/114 (59%)
Query: 91 FSTRSRAYMYSS------LTLTFILNRQYGFYLMDFYAPSILLVCISWVSFWMAPDAVPG 144
F T SR YSS L + F L R F+L+ Y P+ L+V +SWVSFW+ AVP
Sbjct: 256 FHTTSRLAFYSSTGWYNRLYINFTLRRHIFFFLLQTYFPATLMVMLSWVSFWIDRRAVPA 315
Query: 145 RTILGASTMLTFFQLGIETGSSLPNVSYIRSNDVWFFACTVFIFLSLAEFAFVN 198
R LG +T+LT + +S+P VSYI++ D++ + VF+FLS+ E+A VN
Sbjct: 316 RVSLGITTVLTMSTIITGVNASMPRVSYIKAVDIYLWVSFVFVFLSVLEYAAVN 369
>UNIPROTKB|E2R4R0 [details] [associations]
symbol:GABRR2 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0007601 "visual perception" evidence=IEA]
[GO:0007214 "gamma-aminobutyric acid signaling pathway"
evidence=IEA] [GO:0004890 "GABA-A receptor activity" evidence=IEA]
[GO:0045211 "postsynaptic membrane" evidence=IEA] [GO:0030054 "cell
junction" evidence=IEA] [GO:0016021 "integral to membrane"
evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0005230 "extracellular ligand-gated ion channel activity"
evidence=IEA] InterPro:IPR006028 InterPro:IPR006029
InterPro:IPR006201 InterPro:IPR006202 InterPro:IPR008057
InterPro:IPR008059 InterPro:IPR018000 Pfam:PF02931 Pfam:PF02932
PRINTS:PR00252 PRINTS:PR00253 PRINTS:PR01670 PRINTS:PR01672
PROSITE:PS00236 GO:GO:0016021 GO:GO:0005886 GO:GO:0030054
GO:GO:0045211 GO:GO:0005230 GO:GO:0004890 Gene3D:2.70.170.10
PANTHER:PTHR18945 SUPFAM:SSF90112 SUPFAM:SSF63712
TIGRFAMs:TIGR00860 GO:GO:0007214 GO:GO:0007601
GeneTree:ENSGT00630000089571 KO:K05190 CTD:2570 EMBL:AAEX03008512
EMBL:AAEX03008511 RefSeq:XP_539039.2 Ensembl:ENSCAFT00000004973
GeneID:481918 KEGG:cfa:481918 Uniprot:E2R4R0
Length = 490
Score = 220 (82.5 bits), Expect = 2.1e-17, P = 2.1e-17
Identities = 48/114 (42%), Positives = 68/114 (59%)
Query: 91 FSTRSRAYMYSS------LTLTFILNRQYGFYLMDFYAPSILLVCISWVSFWMAPDAVPG 144
F T SR YSS L + F L R F+L+ Y P+ L+V +SWVSFW+ AVP
Sbjct: 258 FHTTSRLAFYSSTGWYNRLYINFTLRRHIFFFLLQTYFPATLMVMLSWVSFWIDRRAVPA 317
Query: 145 RTILGASTMLTFFQLGIETGSSLPNVSYIRSNDVWFFACTVFIFLSLAEFAFVN 198
R LG +T+LT + +S+P VSYI++ D++ + VF+FLS+ E+A VN
Sbjct: 318 RVSLGITTVLTMSTIITGVNASMPRVSYIKAVDIYLWVSFVFVFLSVLEYAAVN 371
WARNING: HSPs involving 61 database sequences were not reported due to the
limiting value of parameter B = 250.
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.328 0.140 0.447 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 204 204 0.00094 111 3 11 22 0.38 32
31 0.46 35
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 311
No. of states in DFA: 610 (65 KB)
Total size of DFA: 182 KB (2103 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 16.88u 0.07s 16.95t Elapsed: 00:00:20
Total cpu time: 16.92u 0.08s 17.00t Elapsed: 00:00:20
Start: Thu Aug 15 13:46:33 2013 End: Thu Aug 15 13:46:53 2013
WARNINGS ISSUED: 2