BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy12708
(695 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|P15330|DORS_DROME Embryonic polarity protein dorsal OS=Drosophila melanogaster GN=dl
PE=1 SV=2
Length = 999
Score = 258 bits (660), Expect = 9e-68, Method: Compositional matrix adjust.
Identities = 145/324 (44%), Positives = 195/324 (60%), Gaps = 26/324 (8%)
Query: 37 RRPYIEILEQPKSK-VRFRYECEGRSAGSIMGANSTLECKSYPKIMIRNYVGDAHLVVSC 95
++PY++I EQP K +RFRYECEGRSAGSI G NST E K+YP I I Y G A +VVSC
Sbjct: 45 KKPYVKITEQPAGKALRFRYECEGRSAGSIPGVNSTPENKTYPTIEIVGYKGRAVVVVSC 104
Query: 96 VSKDSPYRSHPHKLVSKDNCTNGIFCATLLEGDMTYSFTNLGIQCMKKKDIQ-AFRLYLQ 154
V+KD+PYR HPH LV K+ C G+ + M F+NLGIQC+KKKDI+ A + +
Sbjct: 105 VTKDTPYRPHPHNLVGKEGCKKGVCTLEINSETMRAVFSNLGIQCVKKKDIEAALKAREE 164
Query: 155 FCQRPFNSEKNSAWTLLGVMGFNNR---DNLDLNAVRLCFQAYLPKDKDNVIK--LEPVV 209
PF + GF++R ++DLN+VRLCFQ ++ ++ L PVV
Sbjct: 165 IRVDPFKT------------GFSHRFQPSSIDLNSVRLCFQVFMESEQKGRFTSPLPPVV 212
Query: 210 SDIIYDAKTYSDLTIHTLSHVSAPVVGDMKMIILCDKVNKDDIEVRFYEEQDGVVVWDE- 268
S+ I+D K SDL I L SA V G+ ++I+LC+KV K+DI VRF+EE++G VW+
Sbjct: 213 SEPIFDKKAMSDLVICRLCSCSATVFGNTQIILLCEKVAKEDISVRFFEEKNGQSVWEAF 272
Query: 269 -RVKTLEVHKQYAIVLKTPAYKSFEINDPVHVKIQLVTKKD--ISEPYNFMLTPLDSGRP 325
+ +VHKQ AI KTP Y + +I +P V IQL D SE F P+DSG+
Sbjct: 273 GDFQHTDVHKQTAITFKTPRYHTLDITEPAKVFIQLRRPSDGVTSEALPFEYVPMDSGKH 332
Query: 326 IFWR-YRKNKAQPLALVNLFQNTM 348
FW +R K +P +LFQ +
Sbjct: 333 TFWNLHRHLKRKPDE--DLFQQIL 354
Score = 53.1 bits (126), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 23/40 (57%), Positives = 31/40 (77%)
Query: 652 INDDVMLTEAEHYALYTSVAPHATQSEFDEASFYYSPVEG 691
++ ++ LTEAEH+ALYTS+ P A SEFDE S YY+PV+
Sbjct: 941 LDPNLDLTEAEHFALYTSIPPLAAASEFDETSAYYAPVDA 980
Score = 43.9 bits (102), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 60/193 (31%), Positives = 77/193 (39%), Gaps = 67/193 (34%)
Query: 491 GSYSSLQLAMKNQYFIDRNSGGECYEDVLPPQDIPTPP-----PEVATPPVKPVALSNVK 545
+Y+SLQ+A KN I +D++PP TPP PE A PV +++
Sbjct: 623 ATYTSLQIAFKNPVLIP-------MDDIMPP----TPPMSQCAPEDAHQHYDPVEVNSQ- 670
Query: 546 VVIPPASKVTTPPPRPPSHTKPNLATLQRKSTSDKFDSVSTHDDNIPPLPPKRSRK---- 601
A K TP RP P + T+Q DK +PPLPPKR RK
Sbjct: 671 -----ARKPETPM-RPVPPVPPAILTIQYPPEEDK----------LPPLPPKRIRKQDSN 714
Query: 602 -------------------SGLDKNLPPVPK-----------YKSFFHKLFFKSKSKSKP 631
S L+K LPP PK FF KLF + KSK
Sbjct: 715 AENRSIEANTVQTKPSTGESPLNKRLPPAPKNPNFNTLPRQKKPGFFSKLFSRRKSKPDL 774
Query: 632 ATPRERSLSIDSR 644
A +E S +DS+
Sbjct: 775 AQGQENSSILDSK 787
>sp|P16236|REL_CHICK Proto-oncogene c-Rel OS=Gallus gallus GN=REL PE=1 SV=2
Length = 598
Score = 202 bits (515), Expect = 6e-51, Method: Compositional matrix adjust.
Identities = 122/290 (42%), Positives = 168/290 (57%), Gaps = 25/290 (8%)
Query: 39 PYIEILEQPKSK-VRFRYECEGRSAGSIMGANSTLECKSYPKIMIRNYVGDAHLVVSCVS 97
PYIEI EQP+ + +RFRY+CEGRSAGSI G +ST K++P I I NY G + + V+
Sbjct: 7 PYIEIFEQPRQRGMRFRYKCEGRSAGSIPGEHSTDNNKTFPSIQILNYFGKVKIRTTLVT 66
Query: 98 KDSPYRSHPHKLVSKDNCTNGIFCATLLEGDMTYSFTNLGIQCMKKKDI-QAFRLYLQFC 156
K+ PY+ HPH LV KD C +G + A SF NLGIQC+KKKD+ ++ L +
Sbjct: 67 KNEPYKPHPHDLVGKD-CRDGYYEAEFGPERRVLSFQNLGIQCVKKKDLKESISLRISKK 125
Query: 157 QRPFNSEKNSAWTLLGVMGFNNRDNLDLNAVRLCFQAYLPKDKDN-VIKLEPVVSDIIYD 215
PFN + +N D DLN VRLCFQA+LP + N + L P++S+ IYD
Sbjct: 126 INPFNVPEEQ---------LHNIDEYDLNVVRLCFQAFLPDEHGNYTLALPPLISNPIYD 176
Query: 216 --AKTYSDLTIHTLSHVSAPVVGDMKMIILCDKVNKDDIEVRFYEEQDGVVVWDER--VK 271
A ++L I ++ V G ++ ILCDKV KDDIEVRF + W+ +
Sbjct: 177 NRAPNTAELRICRVNKNCGSVKGGDEIFILCDKVQKDDIEVRFVLDN-----WEAKGSFS 231
Query: 272 TLEVHKQYAIVLKTPAYKSFEINDPVHVKIQLVTKKD--ISEPYNFMLTP 319
+VH+Q AIV +TP + +I +P+ VK+QL D +SEP +F P
Sbjct: 232 QADVHRQVAIVFRTPPFLR-DITEPITVKMQLRRPSDQEVSEPMDFRYLP 280
>sp|Q04206|TF65_HUMAN Transcription factor p65 OS=Homo sapiens GN=RELA PE=1 SV=2
Length = 551
Score = 200 bits (509), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 118/289 (40%), Positives = 162/289 (56%), Gaps = 25/289 (8%)
Query: 39 PYIEILEQPKSK-VRFRYECEGRSAGSIMGANSTLECKSYPKIMIRNYVGDAHLVVSCVS 97
PY+EI+EQPK + +RFRY+CEGRSAGSI G ST K++P I I Y G + +S V+
Sbjct: 19 PYVEIIEQPKQRGMRFRYKCEGRSAGSIPGERSTDTTKTHPTIKINGYTGPGTVRISLVT 78
Query: 98 KDSPYRSHPHKLVSKDNCTNGIFCATLLEGDMTYSFTNLGIQCMKKKDI-QAFRLYLQFC 156
KD P+R HPH+LV KD C +G + A L +SF NLGIQC+KK+D+ QA +Q
Sbjct: 79 KDPPHRPHPHELVGKD-CRDGFYEAELCPDRCIHSFQNLGIQCVKKRDLEQAISQRIQTN 137
Query: 157 QRPFNSEKNSAWTLLGVMGFNNRDNLDLNAVRLCFQAYLPKDKDNVIKLEPVVSDIIYD- 215
PF V R + DLNAVRLCFQ + ++L PV+S I+D
Sbjct: 138 NNPFQ-----------VPIEEQRGDYDLNAVRLCFQVTVRDPSGRPLRLPPVLSHPIFDN 186
Query: 216 -AKTYSDLTIHTLSHVSAPVVGDMKMIILCDKVNKDDIEVRFYEEQDGVVVWDER--VKT 272
A ++L I ++ S +G ++ +LCDKV K+DIEV F W+ R
Sbjct: 187 RAPNTAELKICRVNRNSGSCLGGDEIFLLCDKVQKEDIEVYFTGPG-----WEARGSFSQ 241
Query: 273 LEVHKQYAIVLKTPAYKSFEINDPVHVKIQL--VTKKDISEPYNFMLTP 319
+VH+Q AIV +TP Y + PV V +QL + +++SEP F P
Sbjct: 242 ADVHRQVAIVFRTPPYADPSLQAPVRVSMQLRRPSDRELSEPMEFQYLP 290
>sp|P01125|REL_MELGA Proto-oncogene c-Rel (Fragment) OS=Meleagris gallopavo GN=REL PE=3
SV=3
Length = 538
Score = 200 bits (509), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 121/290 (41%), Positives = 168/290 (57%), Gaps = 25/290 (8%)
Query: 39 PYIEILEQPKSK-VRFRYECEGRSAGSIMGANSTLECKSYPKIMIRNYVGDAHLVVSCVS 97
PYIEI EQP+ + +RFRY+CEGRSAGSI G +ST K++P I I NY G + + V+
Sbjct: 5 PYIEIFEQPRQRGMRFRYKCEGRSAGSIPGEHSTDNNKTFPSIQILNYFGKVKIRTTLVT 64
Query: 98 KDSPYRSHPHKLVSKDNCTNGIFCATLLEGDMTYSFTNLGIQCMKKKDI-QAFRLYLQFC 156
K+ PY+ HPH LV KD C +G + A SF NLGIQC+KKKD+ ++ L +
Sbjct: 65 KNEPYKPHPHDLVGKD-CRDGYYEAEFGPERRVLSFQNLGIQCVKKKDLKESISLRISKK 123
Query: 157 QRPFNSEKNSAWTLLGVMGFNNRDNLDLNAVRLCFQAYLPKDKDN-VIKLEPVVSDIIYD 215
PFN + +N D DLN VRLCFQA+LP + N + L P++S+ IYD
Sbjct: 124 INPFNVPEEQ---------LHNIDEYDLNVVRLCFQAFLPDEHGNYTLALPPLISNPIYD 174
Query: 216 --AKTYSDLTIHTLSHVSAPVVGDMKMIILCDKVNKDDIEVRFYEEQDGVVVWDER--VK 271
A ++L I ++ V G ++ +LCDKV KDDIEVRF + W+ +
Sbjct: 175 NGAPNTAELRICRVNKNCGSVKGGDEIFLLCDKVQKDDIEVRFV-----LGNWEAKGSFS 229
Query: 272 TLEVHKQYAIVLKTPAYKSFEINDPVHVKIQLVTKKD--ISEPYNFMLTP 319
+VH+Q AIV +TP + +I +P+ VK+QL D +SEP +F P
Sbjct: 230 QADVHRQVAIVFRTPPFLR-DITEPITVKMQLRRPSDQEVSEPVDFRYLP 278
>sp|P01126|REL_AVIRE Transforming protein rel polyprotein OS=Avian reticuloendotheliosis
virus GN=V-REL PE=4 SV=1
Length = 503
Score = 200 bits (508), Expect = 4e-50, Method: Compositional matrix adjust.
Identities = 120/290 (41%), Positives = 166/290 (57%), Gaps = 25/290 (8%)
Query: 39 PYIEILEQPKSK-VRFRYECEGRSAGSIMGANSTLECKSYPKIMIRNYVGDAHLVVSCVS 97
PYIEI EQP+ + RFRY+CEGRSAGSI G +ST K++P I I NY G + + V+
Sbjct: 16 PYIEIFEQPRQRGTRFRYKCEGRSAGSIPGEHSTDNNKTFPSIQILNYFGKVKIRTTLVT 75
Query: 98 KDSPYRSHPHKLVSKDNCTNGIFCATLLEGDMTYSFTNLGIQCMKKKDI-QAFRLYLQFC 156
K+ PY+ HPH LV K C +G + A SF NLGIQC+KKKD+ ++ L +
Sbjct: 76 KNEPYKPHPHDLVGK-GCRDGYYEAEFGPERQVLSFQNLGIQCVKKKDLKESISLRISKK 134
Query: 157 QRPFNSEKNSAWTLLGVMGFNNRDNLDLNAVRLCFQAYLPKDKDN-VIKLEPVVSDIIYD 215
PFN + +N D DLN VRLCFQA+LP + N + L P++S+ IYD
Sbjct: 135 INPFNVPEEQ---------LHNIDEYDLNVVRLCFQAFLPDEHGNYTLALPPLISNPIYD 185
Query: 216 --AKTYSDLTIHTLSHVSAPVVGDMKMIILCDKVNKDDIEVRFYEEQDGVVVWDER--VK 271
A ++L I ++ V G ++ +LCDKV KDDIEVRF + W+ +
Sbjct: 186 NRAPNTAELRICRVNKNCGSVKGGDEIFLLCDKVQKDDIEVRFV-----LGNWEAKGSFS 240
Query: 272 TLEVHKQYAIVLKTPAYKSFEINDPVHVKIQLVTKKD--ISEPYNFMLTP 319
+VH+Q AIV +TP + +I +P+ VK+QL D +SEP +F P
Sbjct: 241 QADVHRQVAIVFRTPPFLG-DITEPITVKMQLRRPSDQAVSEPVDFRYLP 289
>sp|Q04207|TF65_MOUSE Transcription factor p65 OS=Mus musculus GN=Rela PE=1 SV=1
Length = 549
Score = 199 bits (506), Expect = 6e-50, Method: Compositional matrix adjust.
Identities = 118/289 (40%), Positives = 162/289 (56%), Gaps = 25/289 (8%)
Query: 39 PYIEILEQPKSK-VRFRYECEGRSAGSIMGANSTLECKSYPKIMIRNYVGDAHLVVSCVS 97
PY+EI+EQPK + +RFRY+CEGRSAGSI G ST K++P I I Y G + +S V+
Sbjct: 19 PYVEIIEQPKQRGMRFRYKCEGRSAGSIPGERSTDTTKTHPTIKINGYTGPGTVRISLVT 78
Query: 98 KDSPYRSHPHKLVSKDNCTNGIFCATLLEGDMTYSFTNLGIQCMKKKDI-QAFRLYLQFC 156
KD P+R HPH+LV KD C +G + A L +SF NLGIQC+KK+D+ QA +Q
Sbjct: 79 KDPPHRPHPHELVGKD-CRDGYYEADLCPDRSIHSFQNLGIQCVKKRDLEQAISQRIQTN 137
Query: 157 QRPFNSEKNSAWTLLGVMGFNNRDNLDLNAVRLCFQAYLPKDKDNVIKLEPVVSDIIYD- 215
PF+ V R + DLNAVRLCFQ + + L PV+S I+D
Sbjct: 138 NNPFH-----------VPIEEQRGDYDLNAVRLCFQVTVRDPAGRPLLLTPVLSHPIFDN 186
Query: 216 -AKTYSDLTIHTLSHVSAPVVGDMKMIILCDKVNKDDIEVRFYEEQDGVVVWDER--VKT 272
A ++L I ++ S +G ++ +LCDKV K+DIEV F W+ R
Sbjct: 187 RAPNTAELKICRVNRNSGSCLGGDEIFLLCDKVQKEDIEVYFTGPG-----WEARGSFSQ 241
Query: 273 LEVHKQYAIVLKTPAYKSFEINDPVHVKIQL--VTKKDISEPYNFMLTP 319
+VH+Q AIV +TP Y + PV V +QL + +++SEP F P
Sbjct: 242 ADVHRQVAIVFRTPPYADPSLQAPVRVSMQLRRPSDRELSEPMEFQYLP 290
>sp|Q04864|REL_HUMAN Proto-oncogene c-Rel OS=Homo sapiens GN=REL PE=1 SV=1
Length = 619
Score = 197 bits (501), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 134/345 (38%), Positives = 187/345 (54%), Gaps = 37/345 (10%)
Query: 39 PYIEILEQPKSK-VRFRYECEGRSAGSIMGANSTLECKSYPKIMIRNYVGDAHLVVSCVS 97
PYIEI+EQP+ + +RFRY+CEGRSAGSI G +ST ++YP I I NY G + ++ V+
Sbjct: 8 PYIEIIEQPRQRGMRFRYKCEGRSAGSIPGEHSTDNNRTYPSIQIMNYYGKGKVRITLVT 67
Query: 98 KDSPYRSHPHKLVSKDNCTNGIFCATLLEGDMTYSFTNLGIQCMKKKDI-QAFRLYLQFC 156
K+ PY+ HPH LV KD C +G + A + F NLGI+C+KKK++ +A ++
Sbjct: 68 KNDPYKPHPHDLVGKD-CRDGYYEAEFGQERRPLFFQNLGIRCVKKKEVKEAIITRIKAG 126
Query: 157 QRPFNSEKNSAWTLLGVMGFNNRDNLDLNAVRLCFQAYLPKDKDNV-IKLEPVVSDIIYD 215
PFN + N+ ++ DLN VRLCFQ +LP + N+ L PVVS+ IYD
Sbjct: 127 INPFNVPEKQ---------LNDIEDCDLNVVRLCFQVFLPDEHGNLTTALPPVVSNPIYD 177
Query: 216 --AKTYSDLTIHTLSHVSAPVVGDMKMIILCDKVNKDDIEVRFYEEQDGVVVWDERVKTL 273
A ++L I ++ V G ++ +LCDKV KDDIEVRF V+ D K +
Sbjct: 178 NRAPNTAELRICRVNKNCGSVRGGDEIFLLCDKVQKDDIEVRF-------VLNDWEAKGI 230
Query: 274 ----EVHKQYAIVLKTPAYKSFEINDPVHVKIQLVTKKD--ISEPYNFMLTPLDSGRPIF 327
+VH+Q AIV KTP Y I +PV VK+QL D +SE +F P +
Sbjct: 231 FSQADVHRQVAIVFKTPPYCK-AITEPVTVKMQLRRPSDQEVSESMDFRYLPDEKDT--- 286
Query: 328 WRYRKNKAQPLALVNLFQNTMTQFVPGEEKKISQD--EQIVSAEP 370
NKA+ LFQ V + + QD E + S +P
Sbjct: 287 ---YGNKAKKQKTTLLFQKLCQDHVETGFRHVDQDGLELLTSGDP 328
>sp|Q04863|RELB_MOUSE Transcription factor RelB OS=Mus musculus GN=Relb PE=1 SV=2
Length = 558
Score = 196 bits (497), Expect = 7e-49, Method: Compositional matrix adjust.
Identities = 117/296 (39%), Positives = 169/296 (57%), Gaps = 30/296 (10%)
Query: 38 RPYIEILEQPKSK-VRFRYECEGRSAGSIMGANSTLECKSYPKIMIRNYVG--DAHLVVS 94
RPY+ I EQPK + +RFRYECEGRSAGSI+G +ST K+ P I +R+ G + +
Sbjct: 102 RPYLVITEQPKQRGMRFRYECEGRSAGSILGESSTEASKTLPAIELRDCGGLREVEVTAC 161
Query: 95 CVSKDSPYRSHPHKLVSKDNCTNGIFCATLLEGDMT--YSFTNLGIQCMKKKDIQ-AFRL 151
V KD P+R HPH LV KD CT+G+ C L ++ +SF NLGIQC++KK+I+ A
Sbjct: 162 LVWKDWPHRVHPHSLVGKD-CTDGV-CRVRLRPHVSPRHSFNNLGIQCVRKKEIEAAIER 219
Query: 152 YLQFCQRPFNSEKNSAWTLLGVMGFNNRDNLDLNAVRLCFQAYLPKDKDNVIKLEPVVSD 211
+Q P+N+ N +D+N VR+CFQA + ++ +++P++S+
Sbjct: 220 KIQLGIDPYNAGS-----------LKNHQEVDMNVVRICFQASYRDQQGHLHRMDPILSE 268
Query: 212 IIYDAKT--YSDLTIHTLSHVSAPVVGDMKMIILCDKVNKDDIEVRFYEEQDGVVVWDER 269
+YD K+ S+L I ++ S P G ++ +LCDKV K+DI V F W+ R
Sbjct: 269 PVYDKKSTNTSELRICRINKESGPCTGGEELYLLCDKVQKEDISVVF-----STASWEGR 323
Query: 270 V--KTLEVHKQYAIVLKTPAYKSFEINDPVHVKI--QLVTKKDISEPYNFMLTPLD 321
+VH+Q AIV KTP Y+ EI++PV V + Q +T SEP F P D
Sbjct: 324 ADFSQADVHRQIAIVFKTPPYEDLEISEPVTVNVFLQRLTDGVCSEPLPFTYLPRD 379
>sp|Q04865|TF65_XENLA Putative transcription factor p65 homolog OS=Xenopus laevis GN=rela
PE=2 SV=1
Length = 527
Score = 193 bits (490), Expect = 5e-48, Method: Compositional matrix adjust.
Identities = 120/296 (40%), Positives = 172/296 (58%), Gaps = 27/296 (9%)
Query: 39 PYIEILEQPKSK-VRFRYECEGRSAGSIMGANSTLECKSYPKIMIRNYVGDAHLVVSCVS 97
P +EI+EQPK + +RFRY+CEGRSAGSI G ST K++P I I NY G A + +S V+
Sbjct: 18 PPVEIIEQPKQRGMRFRYKCEGRSAGSIPGERSTDTSKTHPTIKINNYQGPARIRISLVT 77
Query: 98 KDSPYRSHPHKLVSKDNCTNGIFCATLLEGDMTYSFTNLGIQCMKKKDIQ-AFRLYLQFC 156
KDSP++ HPH+LV KD C +G + A L +SF NLGIQC+KK++++ A ++
Sbjct: 78 KDSPHKPHPHELVGKD-CKDGYYEAELSPDRSIHSFQNLGIQCVKKREVEDAVAHRIRTN 136
Query: 157 QRPFNSEKNSAWTLLGVMGFNNRDNLDLNAVRLCFQAYLP-KDKDNVIKLEPVVSDIIYD 215
PFN + + DLN V LCFQ ++P + ++ L VVS IYD
Sbjct: 137 NNPFNVSPEEL-----------KADYDLNTVCLCFQVFIPDQAAGRMLPLPFVVSQPIYD 185
Query: 216 --AKTYSDLTIHTLSHVSAPVVGDMKMIILCDKVNKDDIEVRFYEEQDGVVVWDER--VK 271
A ++L I ++ S +G ++ +LCDKV K+DIEV F G+ W+ R
Sbjct: 186 NRAPNTAELKICRVNKNSGSCLGGDEIFLLCDKVQKEDIEVIF-----GLGNWEARGIFS 240
Query: 272 TLEVHKQYAIVLKTPAYKSFEINDPVHVKIQLV--TKKDISEPYNFMLTPLDSGRP 325
+VH+Q AIV +TPA++ +I V V++QL + K++SEP F P D G P
Sbjct: 241 QADVHRQVAIVFRTPAFQDTKIRQSVKVQMQLRRPSDKEVSEPMEFQYLP-DEGDP 295
>sp|Q01201|RELB_HUMAN Transcription factor RelB OS=Homo sapiens GN=RELB PE=1 SV=2
Length = 579
Score = 192 bits (488), Expect = 8e-48, Method: Compositional matrix adjust.
Identities = 117/296 (39%), Positives = 167/296 (56%), Gaps = 30/296 (10%)
Query: 38 RPYIEILEQPKSK-VRFRYECEGRSAGSIMGANSTLECKSYPKIMIRNYVG--DAHLVVS 94
+P++ I EQPK + +RFRYECEGRSAGSI+G +ST K+ P I +R+ G + +
Sbjct: 124 QPHLVITEQPKQRGMRFRYECEGRSAGSILGESSTEASKTLPAIELRDCGGLREVEVTAC 183
Query: 95 CVSKDSPYRSHPHKLVSKDNCTNGIFCATLLEGDMT--YSFTNLGIQCMKKKDIQ-AFRL 151
V KD P+R HPH LV KD CT+GI C L ++ +SF NLGIQC++KK+I+ A
Sbjct: 184 LVWKDWPHRVHPHSLVGKD-CTDGI-CRVRLRPHVSPRHSFNNLGIQCVRKKEIEAAIER 241
Query: 152 YLQFCQRPFNSEKNSAWTLLGVMGFNNRDNLDLNAVRLCFQAYLPKDKDNVIKLEPVVSD 211
+Q P+N+ N +D+N VR+CFQA + + +++PV+S+
Sbjct: 242 KIQLGIDPYNAGS-----------LKNHQEVDMNVVRICFQASYRDQQGQMRRMDPVLSE 290
Query: 212 IIYDAKT--YSDLTIHTLSHVSAPVVGDMKMIILCDKVNKDDIEVRFYEEQDGVVVWDER 269
+YD K+ S+L I ++ S P G ++ +LCDKV K+DI V F W+ R
Sbjct: 291 PVYDKKSTNTSELRICRINKESGPCTGGEELYLLCDKVQKEDISVVFSRAS-----WEGR 345
Query: 270 V--KTLEVHKQYAIVLKTPAYKSFEINDPVHVKI--QLVTKKDISEPYNFMLTPLD 321
+VH+Q AIV KTP Y+ EI +PV V + Q +T SEP F P D
Sbjct: 346 ADFSQADVHRQIAIVFKTPPYEDLEIVEPVTVNVFLQRLTDGVCSEPLPFTYLPRD 401
>sp|P25799|NFKB1_MOUSE Nuclear factor NF-kappa-B p105 subunit OS=Mus musculus GN=Nfkb1
PE=1 SV=2
Length = 971
Score = 187 bits (475), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 121/311 (38%), Positives = 163/311 (52%), Gaps = 31/311 (9%)
Query: 39 PYIEILEQPKSK-VRFRYECEGRSAGSIMGANSTLECKSYPKIMIRNYVGDAHLVVSCVS 97
PY++ILEQPK + RFRY CEG S G + GA+S KSYP++ I NYVG A ++V V+
Sbjct: 40 PYLQILEQPKQRGFRFRYVCEGPSHGGLPGASSEKNKKSYPQVKICNYVGPAKVIVQLVT 99
Query: 98 KDSPYRSHPHKLVSKDNCTNGIFCATLLEGDMTYSFTNLGI-QCMKKKDIQAFRLYL-QF 155
H H LV K +C +G+ T DM F NLGI KKK + + +
Sbjct: 100 NGKNIHLHAHSLVGK-HCEDGVCTVTAGPKDMVVGFANLGILHVTKKKVFETLEARMTEA 158
Query: 156 CQRPFNSE--KNSAWTLLGVMGFNNRD------------------NLDLNAVRLCFQAYL 195
C R +N +S L G +R +DL+ VRL F A+L
Sbjct: 159 CIRGYNPGLLVHSDLAYLQAEGGGDRQLTDREKEIIRQAAVQQTKEMDLSVVRLMFTAFL 218
Query: 196 PKDKDNVI-KLEPVVSDIIYDAKT--YSDLTIHTLSHVSAPVVGDMKMIILCDKVNKDDI 252
P + +LEPVVSD IYD+K S+L I + + V G ++ +LCDKV KDDI
Sbjct: 219 PDSTGSFTRRLEPVVSDAIYDSKAPNASNLKIVRMDRTAGCVTGGEEIYLLCDKVQKDDI 278
Query: 253 EVRFYEEQDGVVVWD--ERVKTLEVHKQYAIVLKTPAYKSFEINDPVHVKIQLVTKKDI- 309
++RFYEE++ VW+ +VH+Q+AIV KTP YK I P V +QL K D+
Sbjct: 279 QIRFYEEEENGGVWEGFGDFSPTDVHRQFAIVFKTPKYKDVNITKPASVFVQLRRKSDLE 338
Query: 310 -SEPYNFMLTP 319
SEP F+ P
Sbjct: 339 TSEPKPFLYYP 349
>sp|P19838|NFKB1_HUMAN Nuclear factor NF-kappa-B p105 subunit OS=Homo sapiens GN=NFKB1
PE=1 SV=2
Length = 968
Score = 187 bits (474), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 119/311 (38%), Positives = 160/311 (51%), Gaps = 31/311 (9%)
Query: 39 PYIEILEQPKSK-VRFRYECEGRSAGSIMGANSTLECKSYPKIMIRNYVGDAHLVVSCVS 97
PY++ILEQPK + RFRY CEG S G + GA+S KSYP++ I NYVG A ++V V+
Sbjct: 42 PYLQILEQPKQRGFRFRYVCEGPSHGGLPGASSEKNKKSYPQVKICNYVGPAKVIVQLVT 101
Query: 98 KDSPYRSHPHKLVSKDNCTNGIFCATLLEGDMTYSFTNLGI-QCMKKKDIQAFRLYL-QF 155
H H LV K +C +GI T DM F NLGI KKK + + +
Sbjct: 102 NGKNIHLHAHSLVGK-HCEDGICTVTAGPKDMVVGFANLGILHVTKKKVFETLEARMTEA 160
Query: 156 CQRPFN--------------------SEKNSAWTLLGVMGFNNRDNLDLNAVRLCFQAYL 195
C R +N + L+ +DL+ VRL F A+L
Sbjct: 161 CIRGYNPGLLVHPDLAYLQAEGGGDRQLGDREKELIRQAALQQTKEMDLSVVRLMFTAFL 220
Query: 196 PKDKDNVIK-LEPVVSDIIYDAKT--YSDLTIHTLSHVSAPVVGDMKMIILCDKVNKDDI 252
P + + LEPVVSD IYD+K S+L I + + V G ++ +LCDKV KDDI
Sbjct: 221 PDSTGSFTRRLEPVVSDAIYDSKAPNASNLKIVRMDRTAGCVTGGEEIYLLCDKVQKDDI 280
Query: 253 EVRFYEEQDGVVVWD--ERVKTLEVHKQYAIVLKTPAYKSFEINDPVHVKIQLVTKKDI- 309
++RFYEE++ VW+ +VH+Q+AIV KTP YK I P V +QL K D+
Sbjct: 281 QIRFYEEEENGGVWEGFGDFSPTDVHRQFAIVFKTPKYKDINITKPASVFVQLRRKSDLE 340
Query: 310 -SEPYNFMLTP 319
SEP F+ P
Sbjct: 341 TSEPKPFLYYP 351
>sp|P98152|TF65_CHICK Transcription factor p65 OS=Gallus gallus GN=RELA PE=1 SV=1
Length = 558
Score = 185 bits (470), Expect = 8e-46, Method: Compositional matrix adjust.
Identities = 110/292 (37%), Positives = 165/292 (56%), Gaps = 32/292 (10%)
Query: 39 PYIEILEQPKSK-VRFRYECEGRSAGSIMGANSTLECKSYPKIMIRNYVGDAHLVVSCVS 97
P++EILEQPK + +RFRY+CEGRSAGSI G +ST +++P I + +Y G + VS V+
Sbjct: 25 PFVEILEQPKQRGMRFRYKCEGRSAGSIPGEHSTDSARTHPTIRVNHYRGPGRVRVSLVT 84
Query: 98 KDSPYRSHPHKLVSKDNCTNGIFCATLLEGDMTYSFTNLGIQCMKKKDIQ-AFRLYLQFC 156
KD P+ HPH+LV + +C +G + A L +SF NLGIQC+KK++++ A ++
Sbjct: 85 KDPPHGPHPHELVGR-HCQHGYYEAELSPERCVHSFQNLGIQCVKKRELEAAVAERIRTN 143
Query: 157 QRPFN---SEKNSAWTLLGVMGFNNRDNLDLNAVRLCFQAYLPKDKDNVIKLEPVVSDII 213
PFN E+ + + DL+AVRLCFQ ++ + L PV+S I
Sbjct: 144 NNPFNVPMEERGAEY--------------DLSAVRLCFQVWV-NGPGGLCPLPPVLSQPI 188
Query: 214 YD--AKTYSDLTIHTLSHVSAPVVGDMKMIILCDKVNKDDIEVRFYEEQDGVVVWDER-- 269
YD A + ++L I S G ++ +LCDKV K+DIEVRF+ E W+ +
Sbjct: 189 YDNRAPSTAELRILPGDRNSGSCQGGDEIFLLCDKVQKEDIEVRFWAEG-----WEAKGS 243
Query: 270 VKTLEVHKQYAIVLKTPAYKSFEINDPVHVKIQLVTKKD--ISEPYNFMLTP 319
+VH+Q AIV +TP ++ + PV V+++L D S P +F P
Sbjct: 244 FAAADVHRQVAIVFRTPPFRERSLRHPVTVRMELQRPSDRQRSPPLDFRYLP 295
>sp|Q6F3J0|NFKB1_CANFA Nuclear factor NF-kappa-B p105 subunit OS=Canis familiaris GN=NFKB1
PE=2 SV=2
Length = 972
Score = 185 bits (469), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 119/311 (38%), Positives = 162/311 (52%), Gaps = 31/311 (9%)
Query: 39 PYIEILEQPKSK-VRFRYECEGRSAGSIMGANSTLECKSYPKIMIRNYVGDAHLVVSCVS 97
PY++ILEQPK + RFRY CEG S G + GA+S KSYP++ I NYVG A ++V V+
Sbjct: 42 PYLQILEQPKQRGFRFRYVCEGPSHGGLPGASSEKNKKSYPQVKICNYVGPAKVIVQLVT 101
Query: 98 KDSPYRSHPHKLVSKDNCTNGIFCATLLEGDMTYSFTNLGI-QCMKKKDIQAFRLYL-QF 155
H H LV K +C +GI T DM F NLGI KKK + + +
Sbjct: 102 NGKNIHLHAHSLVGK-HCEDGICTVTAGPKDMVVGFANLGILHVTKKKVFETLEARMTEA 160
Query: 156 CQRPFNSEK--NSAWTLLGVMGFNNRD------------------NLDLNAVRLCFQAYL 195
C + +N + L G +R +DL+ VRL F A+L
Sbjct: 161 CTKGYNPGLLVHPDLAYLQAEGGGDRQLTDREKEIIRQAALQQTKEMDLSVVRLMFTAFL 220
Query: 196 PKDKDNVIK-LEPVVSDIIYDAKT--YSDLTIHTLSHVSAPVVGDMKMIILCDKVNKDDI 252
P + + LEPVVSD IYD+K S+L I + + V G ++ +LCDKV KDDI
Sbjct: 221 PDSTGSFTRRLEPVVSDAIYDSKAPNASNLKIVRMDRTAGCVTGGEEIYLLCDKVQKDDI 280
Query: 253 EVRFYEEQDGVVVWD--ERVKTLEVHKQYAIVLKTPAYKSFEINDPVHVKIQLVTKKDI- 309
++RFYEE++ +W+ +VH+Q+AIV KTP YK I P V +QL K D+
Sbjct: 281 QIRFYEEEENGGIWEGFGDFSPTDVHRQFAIVFKTPKYKDVNITKPASVFVQLRRKSDLE 340
Query: 310 -SEPYNFMLTP 319
SEP F+ P
Sbjct: 341 TSEPKPFLYYP 351
>sp|P51509|RELB_CHICK Transcription factor RelB homolog OS=Gallus gallus GN=RELB PE=1
SV=2
Length = 549
Score = 183 bits (464), Expect = 5e-45, Method: Compositional matrix adjust.
Identities = 113/288 (39%), Positives = 164/288 (56%), Gaps = 32/288 (11%)
Query: 43 ILEQPK-SKVRFRYECEGRSAGSIMGANSTLECKSYPKIMIRN--YVGDAHLVVSCVSKD 99
I EQPK + +RFRYECEGRSAGSI+G +ST K+ P I + N + + + V KD
Sbjct: 142 ITEQPKKTGMRFRYECEGRSAGSILGESSTEASKTLPAIELLNCQAIPEVQVTACLVWKD 201
Query: 100 SPYRSHPHKLVSKDNCTNGIFCATLLE--GDMTYSFTNLGIQCMKKKDIQ-AFRLYLQFC 156
P+R HPH LV KD C+NG+ C L+ + +SF+NLGIQC+KKK+I+ A LQ
Sbjct: 202 WPHRVHPHGLVGKD-CSNGL-CQVRLQPHANPRHSFSNLGIQCVKKKEIEAAIEKKLQLG 259
Query: 157 QRPFNSEKNSAWTLLGVMGFNNRDNLDLNAVRLCFQAYLPKDKDNVIKLEPVVSDIIYDA 216
PF + N +D+N VR+CFQA +L PV+S+ I+D
Sbjct: 260 IDPFKAGS-----------LKNHQEVDMNVVRICFQASYRDGSGRTRQLSPVLSEPIFDK 308
Query: 217 KT--YSDLTIHTLSHVSAPVVGDMKMIILCDKVNKDDIEVRFYEEQDGVVVWDERV--KT 272
K+ S+L I ++ S P G ++ +LCDKV K+DI V F +E W+ R
Sbjct: 309 KSTNTSELRICRMNKESGPCTGGEELYLLCDKVQKEDIAVVFRKEP-----WEARADFSQ 363
Query: 273 LEVHKQYAIVLKTPAYKSFEINDPVHVKI--QLVTKKDISE--PYNFM 316
+VH+Q AIVL+TP Y+ ++++PV V++ Q +T + S PY ++
Sbjct: 364 ADVHRQGAIVLRTPPYRCVQLSEPVQVEVFLQRLTDRARSRGCPYTYL 411
>sp|P15307|REL_MOUSE Proto-oncogene c-Rel OS=Mus musculus GN=Rel PE=1 SV=2
Length = 587
Score = 183 bits (464), Expect = 5e-45, Method: Compositional matrix adjust.
Identities = 116/290 (40%), Positives = 161/290 (55%), Gaps = 25/290 (8%)
Query: 39 PYIEILEQPKSK-VRFRYECEGRSAGSIMGANSTLECKSYPKIMIRNYVGDAHLVVSCVS 97
PY+EI+EQP+ + +RFRY+CEGRSAGSI G ST ++YP + I NY G + ++ V+
Sbjct: 8 PYVEIIEQPRQRGMRFRYKCEGRSAGSIPGERSTDNNRTYPSVQIMNYYGKGKIRITLVT 67
Query: 98 KDSPYRSHPHKLVSKDNCTNGIFCATLLEGDMTYSFTNLGIQCMKKKDIQ-AFRLYLQFC 156
K+ PY+ HPH LV KD C +G + A F NLGI+C+KKK+++ A L +
Sbjct: 68 KNDPYKPHPHDLVGKD-CRDGYYEAEFGPERRPLFFQNLGIRCVKKKEVKGAIILRISAG 126
Query: 157 QRPFNSEKNSAWTLLGVMGFNNRDNLDLNAVRLCFQAYLPKDKDN-VIKLEPVVSDIIYD 215
PFN +G + ++ DLN VR F +LP + N L P+VS+ IYD
Sbjct: 127 INPFN---------VGEQQLLDIEDCDLNVVRCVFMFFLPDEDGNFTTALPPIVSNPIYD 177
Query: 216 --AKTYSDLTIHTLSHVSAPVVGDMKMIILCDKVNKDDIEVRFYEEQDGVVVWDER--VK 271
A ++L I ++ V G ++ +LCDKV KDDIEVRF W+ R
Sbjct: 178 NRAPNTAELRICRVNKNCGSVRGGDEIFLLCDKVQKDDIEVRFVLND-----WEARGVFS 232
Query: 272 TLEVHKQYAIVLKTPAYKSFEINDPVHVKIQLVTKKD--ISEPYNFMLTP 319
+VH+Q AIV KTP Y I +PV VK+QL D +SE +F P
Sbjct: 233 QADVHRQVAIVFKTPPYCK-AILEPVTVKMQLRRPSDQEVSESMDFRYLP 281
>sp|P98149|DIF_DROME Dorsal-related immunity factor Dif OS=Drosophila melanogaster
GN=Dif PE=2 SV=2
Length = 667
Score = 181 bits (459), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 122/314 (38%), Positives = 177/314 (56%), Gaps = 35/314 (11%)
Query: 23 DQSMDSVQSRLDASRRPYIEILEQPKSKV-RFRYECEGRSAGSIMGANSTLEC-KSYPKI 80
+Q+M+ A P++ I+E+P S + RFRY+CEGR+AGSI G NS+ E K++P I
Sbjct: 62 NQNMNQNLPEPSARSGPHLRIVEEPTSNIIRFRYKCEGRTAGSIPGMNSSSETGKTFPTI 121
Query: 81 MIRNYVGDAHLVVSCVSKDSPYRSHPHKLVSK---DNCTNGIFCATLLEGDMTYSFTNLG 137
+ NY G +VVSCV+ D P+R HPH LVSK D C +GI+ L + +G
Sbjct: 122 EVCNYDGPVIIVVSCVTSDEPFRQHPHWLVSKEEADACKSGIYQKKLPPEERRLVLQKVG 181
Query: 138 IQCMKKKDIQAFRLYLQFCQR----PFNSEKNSAWTLLGVMGFNNRDNLD-LN--AVRLC 190
IQC KK ++ R L +R PFN++ F+++D +D +N +RLC
Sbjct: 182 IQCAKKLEM---RDSLVERERRNIDPFNAK------------FDHKDQIDKINRYELRLC 226
Query: 191 FQAYLPKDKDNVIKLEPVVSDIIYDAKTYSDLTIHTLSHVSAPVVGDMKMIILCDKVNKD 250
+QA++ V L+P+VS IY S+LTI L +A G ++I+LC+K+ KD
Sbjct: 227 YQAFITVGNSKV-PLDPIVSSPIYGKS--SELTITRLCSCAATANGGDEIIMLCEKIAKD 283
Query: 251 DIEVRFYE-EQDGVVVW--DERVKTLEVHKQYAIVLKTPAYKSFEINDPVHVKIQLVTKK 307
DIEVRFYE ++DG W + + +V KQ AI KTP Y++ EI V+V+++LV
Sbjct: 284 DIEVRFYETDKDGRETWFANAEFQPTDVFKQMAIAFKTPRYRNTEITQSVNVELKLVRPS 343
Query: 308 D--ISEPYNFMLTP 319
D S P F P
Sbjct: 344 DGATSAPLPFEYYP 357
>sp|Q04861|NFKB1_CHICK Nuclear factor NF-kappa-B p105 subunit OS=Gallus gallus GN=NFKB1
PE=2 SV=2
Length = 983
Score = 174 bits (441), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 114/317 (35%), Positives = 160/317 (50%), Gaps = 31/317 (9%)
Query: 33 LDASRRPYIEILEQPKSK-VRFRYECEGRSAGSIMGANSTLECKSYPKIMIRNYVGDAHL 91
L + PY++I+EQPK + RFRY CEG S G + GA+S KSYP++ I NYVG A +
Sbjct: 41 LRTADGPYLQIIEQPKQRGFRFRYVCEGPSHGGLPGASSEKNKKSYPQVKICNYVGPAKV 100
Query: 92 VVSCVSKDSPYRSHPHKLVSKDNCTNGIFCATLLEGDMTYSFTNLGI-QCMKKKDIQAFR 150
+V V+ H H LV K C +G+ DM F NLGI KKK +
Sbjct: 101 IVQLVTNGKYVHLHAHSLVGK-FCEDGVCTVNAGPKDMVVGFANLGILHVTKKKVFETLE 159
Query: 151 L-YLQFCQRPFNSEK--NSAWTLLGVMGFNNRD------------------NLDLNAVRL 189
+ C++ +N + L G +R +DL+ VRL
Sbjct: 160 TRMIDACKKGYNPGLLVHPELGYLQAEGCGDRQLTEREREIIRQAAVQQTKEMDLSVVRL 219
Query: 190 CFQAYLPKDKDNVIK-LEPVVSDIIYDAKT--YSDLTIHTLSHVSAPVVGDMKMIILCDK 246
F A+LP + L+PV+SD IYD+K S+L I + + V G ++ +LCDK
Sbjct: 220 MFTAFLPDSNGGFTRRLDPVISDAIYDSKAPNASNLKIVRMDRTAGCVTGGEEIYLLCDK 279
Query: 247 VNKDDIEVRFYEEQDGVVVWD--ERVKTLEVHKQYAIVLKTPAYKSFEINDPVHVKIQLV 304
V KDDI++RFYEE + +W+ +VH+Q+AIV KTP Y+ I P V +QL
Sbjct: 280 VQKDDIQIRFYEEDENGGMWEGFGDFSPTDVHRQFAIVFKTPKYRDVNITKPASVFVQLR 339
Query: 305 TKKDI--SEPYNFMLTP 319
K D+ SEP F+ P
Sbjct: 340 RKSDLETSEPKPFLYYP 356
>sp|P51510|RELB_XENLA Transcription factor RelB homolog OS=Xenopus laevis GN=relb PE=2
SV=1
Length = 497
Score = 172 bits (437), Expect = 6e-42, Method: Compositional matrix adjust.
Identities = 121/295 (41%), Positives = 164/295 (55%), Gaps = 34/295 (11%)
Query: 39 PYIEILEQPKSK-VRFRYECEGRSAGSIMGANSTLECKSYPKIMIRNYVG--DAHLVVSC 95
P + I EQPK + +RFRY+CEGRS GSI+G ST K+ P+I I N G + H++V
Sbjct: 78 PELNITEQPKQRGMRFRYQCEGRSTGSILGEKSTEHNKTLPEIEIINCDGLEEIHVIVCL 137
Query: 96 VSKDSPYRSHPHKLVSKDNCTNGIFCATL--LEGDMTYSFTNLGIQCMKKKDI-QAFRLY 152
V +D P+R HPH LV KD C NGI TL G +SF+NLGIQC++K++I A
Sbjct: 138 VWRDPPHRVHPHGLVGKD-CHNGICEVTLNPQNGVAKHSFSNLGIQCVRKREIDSAVNER 196
Query: 153 LQFCQRPFNSEKNSAWTLLGVMGFNNRDNLDLNAVRLCFQAYL--PKDKDNVIKLEPVVS 210
L+ P+ + K W L + +DLN VRLCFQA P K ++ PV+S
Sbjct: 197 LKLNIDPYKAGK---WRL--------HEEVDLNVVRLCFQASCTGPGFKYDI---PPVLS 242
Query: 211 DIIYDAKT--YSDLTIHTLSHVSAPVVGDMKMIILCDKVNKDDIEVRFYEEQDGVVVWDE 268
D IYD K+ S+L I ++ G ++ ILCDKV K+DI V F E++ W+
Sbjct: 243 DPIYDKKSTNTSELKISRMNKEYGRCEGGEEVYILCDKVQKEDILVIFGEDK-----WEA 297
Query: 269 RV--KTLEVHKQYAIVLKTPAYKSFEINDPVHVKI--QLVTKKDISEPYNFMLTP 319
R +VH+Q AIVLKTP Y I +P V++ Q +T SE F+ P
Sbjct: 298 RADFSQADVHRQIAIVLKTPPYHDLHITEPACVRVFLQRITDGIRSEGMPFVYMP 352
>sp|Q9WTK5|NFKB2_MOUSE Nuclear factor NF-kappa-B p100 subunit OS=Mus musculus GN=Nfkb2
PE=1 SV=1
Length = 899
Score = 170 bits (431), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 118/311 (37%), Positives = 167/311 (53%), Gaps = 16/311 (5%)
Query: 39 PYIEILEQPKSK-VRFRYECEGRSAGSIMGANSTLECKSYPKIMIRNYVGDAHLVVSCVS 97
PY+ I+EQPK + RFRY CEG S G + GA+S K+YP + I NY G A + V V+
Sbjct: 38 PYLVIVEQPKQRGFRFRYGCEGPSHGGLPGASSEKGRKTYPTVKICNYEGPAKIEVDLVT 97
Query: 98 KDSPYRSHPHKLVSKDNCTNGIFCATLLEGDMTYSFTNLGIQCMKKKDIQAFRLYLQFCQ 157
P R+H H LV K G+ ++ DMT F NLG+ + KK++ + +Q Q
Sbjct: 98 HSDPPRAHAHSLVGKQCSELGVCAVSVGPKDMTAQFNNLGVLHVTKKNM--MEIMIQKLQ 155
Query: 158 RPFNSEKNSAWT-----LLGVMGFNNRDNLDLNAVRLCFQAYL-PKDKDNVIKLEPVVSD 211
R K T L + +DL+ VRL F A+L D + L+PV+S
Sbjct: 156 RQRLRSKPQGLTEAERRELEQEAKELKKVMDLSIVRLRFSAFLRASDGSFSLPLKPVISQ 215
Query: 212 IIYDAKT--YSDLTIHTLSHVSAPVVGDMKMIILCDKVNKDDIEVRFYE-EQDGVVVWDE 268
I+D+K+ S+L I + + V G ++ +LCDKV KDDIEVRFYE +++G + +
Sbjct: 216 PIHDSKSPGASNLKISRMDKTAGSVRGGDEVYLLCDKVQKDDIEVRFYEDDENGWQAFGD 275
Query: 269 RVKTLEVHKQYAIVLKTPAYKSFEINDPVHVKIQLVTKK--DISEPYNFMLTPLDSGRPI 326
T +VHKQYAIV +TP Y +I PV V +QL K+ D+S+ F PL +
Sbjct: 276 FSPT-DVHKQYAIVFRTPPYHKMKIERPVTVFLQLKRKRGGDVSDSKQFTYYPLVEDKEE 334
Query: 327 FWRYRKNKAQP 337
R R+ KA P
Sbjct: 335 VQRKRR-KALP 344
>sp|Q00653|NFKB2_HUMAN Nuclear factor NF-kappa-B p100 subunit OS=Homo sapiens GN=NFKB2
PE=1 SV=4
Length = 900
Score = 169 bits (428), Expect = 6e-41, Method: Compositional matrix adjust.
Identities = 118/311 (37%), Positives = 166/311 (53%), Gaps = 16/311 (5%)
Query: 39 PYIEILEQPKSK-VRFRYECEGRSAGSIMGANSTLECKSYPKIMIRNYVGDAHLVVSCVS 97
PY+ I+EQPK + RFRY CEG S G + GA+S K+YP + I NY G A + V V+
Sbjct: 38 PYLVIVEQPKQRGFRFRYGCEGPSHGGLPGASSEKGRKTYPTVKICNYEGPAKIEVDLVT 97
Query: 98 KDSPYRSHPHKLVSKDNCTNGIFCATLLEGDMTYSFTNLGIQCMKKKDIQAFRLYLQFCQ 157
P R+H H LV K GI ++ DMT F NLG+ + KK++ +Q Q
Sbjct: 98 HSDPPRAHAHSLVGKQCSELGICAVSVGPKDMTAQFNNLGVLHVTKKNMMG--TMIQKLQ 155
Query: 158 RPFNSEKNSAWT-----LLGVMGFNNRDNLDLNAVRLCFQAYL-PKDKDNVIKLEPVVSD 211
R + T L + +DL+ VRL F A+L D + L+PV+S
Sbjct: 156 RQRLRSRPQGLTEAEQRELEQEAKELKKVMDLSIVRLRFSAFLRASDGSFSLPLKPVISQ 215
Query: 212 IIYDAKT--YSDLTIHTLSHVSAPVVGDMKMIILCDKVNKDDIEVRFYE-EQDGVVVWDE 268
I+D+K+ S+L I + + V G ++ +LCDKV KDDIEVRFYE +++G + +
Sbjct: 216 PIHDSKSPGASNLKISRMDKTAGSVRGGDEVYLLCDKVQKDDIEVRFYEDDENGWQAFGD 275
Query: 269 RVKTLEVHKQYAIVLKTPAYKSFEINDPVHVKIQLVTKK--DISEPYNFMLTPLDSGRPI 326
T +VHKQYAIV +TP Y +I PV V +QL K+ D+S+ F PL +
Sbjct: 276 FSPT-DVHKQYAIVFRTPPYHKMKIERPVTVFLQLKRKRGGDVSDSKQFTYYPLVEDKEE 334
Query: 327 FWRYRKNKAQP 337
R R+ KA P
Sbjct: 335 VQRKRR-KALP 344
>sp|P98150|NFKB2_CHICK Nuclear factor NF-kappa-B p100 subunit OS=Gallus gallus GN=NFKB2
PE=1 SV=1
Length = 906
Score = 167 bits (422), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 113/309 (36%), Positives = 162/309 (52%), Gaps = 9/309 (2%)
Query: 33 LDASRRPYIEILEQPKSK-VRFRYECEGRSAGSIMGANSTLECKSYPKIMIRNYVGDAHL 91
++ + PY+ I+EQPK + RFRY CEG S G + GA+S K+YP + I NY G A +
Sbjct: 31 METAVGPYLVIIEQPKQRGFRFRYVCEGPSHGGLPGASSEKGHKTYPTVKICNYEGMARI 90
Query: 92 VVSCVSKDSPYRSHPHKLVSKDNCTNGIFCATLLEGDMTYSFTNLGIQCMKKKDIQAFRL 151
V V+ P R H H LV K G A + DMT F+NLG+ + KK++
Sbjct: 91 EVDLVTHSDPPRVHAHSLVGKQCNEAGNCVAIVGPKDMTAQFSNLGVLHVTKKNMMEIMK 150
Query: 152 YLQFCQRPFNSEKNSAWTLLGVMGFNNRD---NLDLNAVRLCFQAYLPKDKDN-VIKLEP 207
Q+ N+ L + ++ +DL+ VRL F AYL N + L+P
Sbjct: 151 EKLKKQKTRNTNGLLTEAELREIELEAKELKKVMDLSIVRLRFTAYLRDSSGNFTLALQP 210
Query: 208 VVSDIIYDAKT--YSDLTIHTLSHVSAPVVGDMKMIILCDKVNKDDIEVRFYEEQDGVVV 265
V+SD I+D+K+ S+L I + + V G ++ +LCDKV KDDIEVRFYE+ +
Sbjct: 211 VISDPIHDSKSPGASNLKISRMDKTAGSVRGGDEVYLLCDKVQKDDIEVRFYEDDENGWQ 270
Query: 266 WDERVKTLEVHKQYAIVLKTPAYKSFEINDPVHVKIQLVTKK--DISEPYNFMLTPLDSG 323
+VHKQYAIV +TP Y +I+ PV V +QL K+ D+S+ F P+
Sbjct: 271 ASGDFSPTDVHKQYAIVFRTPPYHKPKIDRPVTVFLQLKRKRGGDVSDSKQFTYYPVVED 330
Query: 324 RPIFWRYRK 332
+ R RK
Sbjct: 331 KEEVERNRK 339
>sp|O73630|NFKB2_XENLA Nuclear factor NF-kappa-B p100 subunit OS=Xenopus laevis GN=nfkb2
PE=2 SV=1
Length = 958
Score = 160 bits (404), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 114/305 (37%), Positives = 162/305 (53%), Gaps = 14/305 (4%)
Query: 40 YIEILEQPKSK-VRFRYECEGRSAGSIMGANSTLECKSYPKIMIRNYVGDAHLVVSCVSK 98
Y+ I+EQPK + RFRY CEG S + GA+S K++P + I NYVG A + V V+
Sbjct: 44 YLSIIEQPKQRGFRFRYVCEGPSHRGLPGASSEKGKKTFPTVKIFNYVGMARIEVDLVTH 103
Query: 99 DSPYRSHPHKLVSKDNCTNGIFCATLLEGDMTYSFTNLGIQCMKKKDIQAFRLYLQFCQR 158
P R H H LV K + G T+ DMT F NLGI + KK Q L + +
Sbjct: 104 TDPPRVHAHSLVGKHSNKTGNCIVTVGPEDMTAQFNNLGIVHVTKKS-QTEILKEKMKRN 162
Query: 159 PFNSEKNSAWTLLGVMGFNN-----RDNLDLNAVRLCFQAYLPKDKDN-VIKLEPVVSDI 212
+ + T + + DL+ VRL F AYLP + L PV+SD
Sbjct: 163 ILRNTGRNTLTEVEERKIEQEVKDLKKVTDLSIVRLKFTAYLPDSNGAYTLALPPVISDP 222
Query: 213 IYDAKT--YSDLTIHTLSHVSAPVVGDMKMIILCDKVNKDDIEVRFYE-EQDGVVVWDER 269
I+D+K+ S+L I + + V G ++ +LCDKV KDDIEV+FYE +++G + +
Sbjct: 223 IHDSKSPGASNLRISRMDKTAGSVKGGDEVYLLCDKVQKDDIEVQFYEDDENGWHAFGDF 282
Query: 270 VKTLEVHKQYAIVLKTPAYKSFEINDPVHVKIQLVTKK--DISEPYNFMLTPLDSGRPIF 327
T +VHKQYAIV +TP Y + +I+ PV V +QL KK D+S+ F PL+ +
Sbjct: 283 APT-DVHKQYAIVFRTPPYHTQKIDRPVTVFLQLKRKKGGDVSDSKQFTYYPLEQDKEEV 341
Query: 328 WRYRK 332
R R+
Sbjct: 342 ERKRR 346
>sp|Q94527|NFKB1_DROME Nuclear factor NF-kappa-B p110 subunit OS=Drosophila melanogaster
GN=Rel PE=1 SV=1
Length = 971
Score = 126 bits (316), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 105/310 (33%), Positives = 160/310 (51%), Gaps = 43/310 (13%)
Query: 27 DSVQSRLDASRRPYIEILEQPKSKVRFRYECEGRSA-GSIMGANSTLECKSYPKIMIRNY 85
+ + S D P + I+EQP K RFRY+ E GS+ GANS K++P++ + NY
Sbjct: 138 NGLASDGDIKHVPQLRIVEQPVEKFRFRYKSEMHGTHGSLNGANSKRTPKTFPEVTLCNY 197
Query: 86 VGDAHLVVSC----VSKDSPYRSHPHKLV----SKDNCTNGIFCATLLEGDMTYSFTNLG 137
G A V+ C + DSP H H+LV +D C + G F N+G
Sbjct: 198 DGPA--VIRCSLFQTNLDSP---HSHQLVVRKDDRDVCDPHDLHVSKERG-YVAQFINMG 251
Query: 138 I-----------QCMKKKDIQAFRLYLQFCQRPFNSEKNSAWTLLGVMGFNNRD--NLDL 184
I C KK+D RL Q +R + ++ L + R+ +++L
Sbjct: 252 IIHTAKKYIFEELCKKKQD----RLVFQMNRRELSHKQ-----LQELHQETEREAKDMNL 302
Query: 185 NAVRLCFQAYLPKDKDNVIKLEP-VVSDIIYDAKTY--SDLTIHTLSHVSAPVVGDMKMI 241
N VRLCF+A+ +D + L P V S+ I + K+ +L I LS + V+G+ ++I
Sbjct: 303 NQVRLCFEAFKIEDNGAWVPLAPPVYSNAINNRKSAQTGELRIVRLSKPTGGVMGNDELI 362
Query: 242 ILCDKVNKDDIEVRFYEE-QDGVVVWDERVKTLE--VHKQYAIVLKTPAYKSFEINDPVH 298
+L +KV+K +I+VRF+EE +DG VW+ K E VH QYAIV +TP YK +++ V+
Sbjct: 363 LLVEKVSKKNIKVRFFEEDEDGETVWEAYAKFRESDVHHQYAIVCQTPPYKDKDVDREVN 422
Query: 299 VKIQLVTKKD 308
V I+L+ D
Sbjct: 423 VYIELIRPSD 432
>sp|P98201|NFAC1_BOVIN Nuclear factor of activated T-cells, cytoplasmic 1 OS=Bos taurus
GN=NFATC1 PE=1 SV=2
Length = 803
Score = 57.0 bits (136), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 66/308 (21%), Positives = 122/308 (39%), Gaps = 51/308 (16%)
Query: 20 SQVDQSMDSVQSRLDASRRPY-IEILEQPKSKVRFRYECEGRSAGSIMGANSTLECKSYP 78
S S+ ++ +L + PY + I QPKS R YE EG S G++ + +P
Sbjct: 385 SYTSPSLPALDWQLPSHSGPYELRIEVQPKSHHRAHYETEG-SRGAVKAS-----AGGHP 438
Query: 79 KIMIRNYVGDAHLVVSC---VSKDSPYRSHP----HKLVSKDNCT---NGIFCAT----- 123
+ + YV L + + D R H H++ K T + C+T
Sbjct: 439 SVQLHGYVESEPLTLQLFIGTADDRLLRPHAFYQVHRITGKTVSTASHEAVVCSTKVLEI 498
Query: 124 --LLEGDMTYSFTNLGIQCMKKKDIQAFRLYLQFCQRPFNSEKNSAWTLLGVMGFNNRDN 181
L E +M + GI ++ DI+ + ++ N R
Sbjct: 499 PLLPENNMRATIDCAGILKLRNSDIELRKGETDIGRK------------------NTR-- 538
Query: 182 LDLNAVRLCFQAYLPKDKDNVIKLEPVVSDIIYDAKTYSDLT-IHTLSHVSAPVVGDMKM 240
VRL F+ ++P+ + L+ + I ++ +L + S S PV+G +M
Sbjct: 539 -----VRLVFRVHIPQPNGRTLSLQVASNPIECSQRSAQELPLVEKQSAASGPVLGGKRM 593
Query: 241 IILCDKVNKDDIEVRFYEEQDGVVVWDERVKT-LEVHKQYAIVLKTPAYKSFEINDPVHV 299
++ +D + + DG +W+ KT ++ K ++V++ P +++ I PV V
Sbjct: 594 VLSGHNFLQDSKVIFVEKAPDGHHIWEMEAKTEGDLCKPNSLVVEIPPFRNQRITSPVQV 653
Query: 300 KIQLVTKK 307
+ K
Sbjct: 654 NFYVCNGK 661
>sp|O95644|NFAC1_HUMAN Nuclear factor of activated T-cells, cytoplasmic 1 OS=Homo sapiens
GN=NFATC1 PE=1 SV=3
Length = 943
Score = 52.4 bits (124), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 71/308 (23%), Positives = 122/308 (39%), Gaps = 51/308 (16%)
Query: 20 SQVDQSMDSVQSRLDASRRPY-IEILEQPKSKVRFRYECEGRSAGSIMGANSTLECKSYP 78
S + ++ ++ +L + PY + I QPKS R YE EG S G++ + +P
Sbjct: 406 SYMSPTLPALDWQLPSHSGPYELRIEVQPKSHHRAHYETEG-SRGAVKAS-----AGGHP 459
Query: 79 KIMIRNYVGDAHLVVSC---VSKDSPYRSHP----HKLVSKDNCTN---GIFCAT----- 123
+ + Y+ + L++ + D R H H++ K T I T
Sbjct: 460 IVQLHGYLENEPLMLQLFIGTADDRLLRPHAFYQVHRITGKTVSTTSHEAILSNTKVLEI 519
Query: 124 --LLEGDMTYSFTNLGIQCMKKKDIQAFRLYLQFCQRPFNSEKNSAWTLLGVMGFNNRDN 181
L E M GI ++ DI E T +G R N
Sbjct: 520 PLLPENSMRAVIDCAGILKLRNSDI----------------ELRKGETDIG------RKN 557
Query: 182 LDLNAVRLCFQAYLPKDKDNVIKLEPVVSDIIYDAKTYSDLT-IHTLSHVSAPVVGDMKM 240
VRL F+ ++P+ + L+ + I ++ +L + S S PVVG KM
Sbjct: 558 ---TRVRLVFRVHVPQPSGRTLSLQVASNPIECSQRSAQELPLVEKQSTDSYPVVGGKKM 614
Query: 241 IILCDKVNKDDIEVRFYEEQDGVVVWDERVKT-LEVHKQYAIVLKTPAYKSFEINDPVHV 299
++ +D + + DG VW+ KT ++ K ++V++ P +++ I PVHV
Sbjct: 615 VLSGHNFLQDSKVIFVEKAPDGHHVWEMEAKTDRDLCKPNSLVVEIPPFRNQRITSPVHV 674
Query: 300 KIQLVTKK 307
+ K
Sbjct: 675 SFYVCNGK 682
>sp|O77638|NFAC1_PIG Nuclear factor of activated T-cells, cytoplasmic 1 OS=Sus scrofa
GN=NFATC1 PE=2 SV=2
Length = 822
Score = 51.6 bits (122), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 68/303 (22%), Positives = 118/303 (38%), Gaps = 51/303 (16%)
Query: 25 SMDSVQSRLDASRRPY-IEILEQPKSKVRFRYECEGRSAGSIMGANSTLECKSYPKIMIR 83
S+ ++ +L + PY + I QPKS R YE EG S G++ + +P + +
Sbjct: 401 SLPALDWQLPSHSGPYELRIEVQPKSHHRAHYETEG-SRGAVKAS-----AGGHPSVQLH 454
Query: 84 NYVGDAHLVVSC---VSKDSPYRSHP----HKLVSKDNCTN---GIFCAT-------LLE 126
YV L + + D R H H++ K T + T L E
Sbjct: 455 GYVESEPLTLQLFIGTADDRLLRPHAFYQVHRITGKTVSTTSHEAVLSNTKVLEIPLLPE 514
Query: 127 GDMTYSFTNLGIQCMKKKDIQAFRLYLQFCQRPFNSEKNSAWTLLGVMGFNNRDNLDLNA 186
+M GI ++ DI E T +G R N
Sbjct: 515 NNMRAIIDCAGILKLRNSDI----------------ELRKGETDIG------RKN---TR 549
Query: 187 VRLCFQAYLPKDKDNVIKLEPVVSDIIYDAKTYSDLT-IHTLSHVSAPVVGDMKMIILCD 245
VRL F+ ++P+ + L+ + I ++ +L + S S PV+G +M++
Sbjct: 550 VRLVFRVHIPQPNGRTLSLQVASNPIECSQRSAQELPLVEKQSAASCPVLGGKRMVLTGH 609
Query: 246 KVNKDDIEVRFYEEQDGVVVWDERVKT-LEVHKQYAIVLKTPAYKSFEINDPVHVKIQLV 304
+D V + DG +W+ KT ++ K ++V++ P +++ I PV V +
Sbjct: 610 NFLQDSKVVFVEKAPDGHHIWEMEAKTDGDLCKPNSLVVEIPPFRNQRITSPVQVNFYVC 669
Query: 305 TKK 307
K
Sbjct: 670 NGK 672
>sp|O88942|NFAC1_MOUSE Nuclear factor of activated T-cells, cytoplasmic 1 OS=Mus musculus
GN=Nfatc1 PE=2 SV=1
Length = 717
Score = 48.1 bits (113), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 66/308 (21%), Positives = 120/308 (38%), Gaps = 51/308 (16%)
Query: 20 SQVDQSMDSVQSRLDASRRPY-IEILEQPKSKVRFRYECEGRSAGSIMGANSTLECKSYP 78
S + S+ ++ +L + PY + I QPKS R YE EG S G++ + +P
Sbjct: 407 SYMSPSLPALDWQLPSHSGPYELRIEVQPKSHHRAHYETEG-SRGAVKAS-----AGGHP 460
Query: 79 KIMIRNYVGDAHLVVSC---VSKDSPYRSHP----HKLVSKDNCTNG---IFCAT----- 123
+ + Y+ + L + + D R H H++ K T I T
Sbjct: 461 IVQLHGYLENEPLTLQLFIGTADDRLLRPHAFYQVHRITGKTVSTTSHEIILSNTKVLEI 520
Query: 124 --LLEGDMTYSFTNLGIQCMKKKDIQAFRLYLQFCQRPFNSEKNSAWTLLGVMGFNNRDN 181
L E +M GI ++ DI+ + ++ N R
Sbjct: 521 PLLPENNMRAIIDCAGILKLRNSDIELRKGETDIGRK------------------NTR-- 560
Query: 182 LDLNAVRLCFQAYLPKDKDNVIKLEPVVSDIIYDAKTYSDLT-IHTLSHVSAPVVGDMKM 240
VRL F+ ++P+ + L+ + I ++ +L + S S PV+G KM
Sbjct: 561 -----VRLVFRVHIPQPNGRTLSLQVASNPIECSQRSAQELPLVEKQSTDSYPVIGGKKM 615
Query: 241 IILCDKVNKDDIEVRFYEEQDGVVVWDERVKT-LEVHKQYAIVLKTPAYKSFEINDPVHV 299
++ +D + + DG VW+ KT ++ K ++V++ P +++ I P V
Sbjct: 616 VLSGHNFLQDSKVIFVEKAPDGHHVWEMEAKTDRDLCKPNSLVVEIPPFRNQRITSPAQV 675
Query: 300 KIQLVTKK 307
+ K
Sbjct: 676 SFYVCNGK 683
>sp|C5A475|COBQ_THEGJ Probable cobyric acid synthase OS=Thermococcus gammatolerans
(strain DSM 15229 / JCM 11827 / EJ3) GN=cobQ PE=3 SV=1
Length = 483
Score = 39.3 bits (90), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 38/136 (27%), Positives = 61/136 (44%), Gaps = 13/136 (9%)
Query: 339 ALVNLFQNTMTQFVPGEEKKISQDEQIVSAEPIKEKENDYARVDKSVNINMKPHVTFSQH 398
AL +F N VP + SQ+ + SA I+ E A+ +++ KP V F+
Sbjct: 22 ALCRIFSNLGYDVVPFK----SQNMSLNSAPSIEGGEISRAQYLQAIACRKKPSVRFNPI 77
Query: 399 DTDMETNQVPDVLF--------DTKEKIDERFEELLNEVSNLKDTLEEKNDFLLIEDSNN 450
E N V+F K+ + R EEL + + D L+E++D ++IE + +
Sbjct: 78 LLKPEGNMRSQVIFMGKPIGSVSAKDYMLSRKEELFRKAMKVLDELKERHDLVIIEGAGS 137
Query: 451 AV-ITLDELDDLNNNV 465
V I L + D N V
Sbjct: 138 PVEINLKDYDIANTRV 153
>sp|Q13469|NFAC2_HUMAN Nuclear factor of activated T-cells, cytoplasmic 2 OS=Homo sapiens
GN=NFATC2 PE=1 SV=2
Length = 925
Score = 37.7 bits (86), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 29/139 (20%), Positives = 65/139 (46%), Gaps = 3/139 (2%)
Query: 187 VRLCFQAYLPKDKDNVIKLEPVVSDIIYDAKTYSDLTIHTLSHVSAPVVGDMKMIILCDK 246
VRL F+ ++P+ ++ L+ + I ++ +L + + +V + +IL +
Sbjct: 542 VRLVFRVHIPESSGRIVSLQTASNPIECSQRSAHELPMVERQDTDSCLVYGGQQMILTGQ 601
Query: 247 VNKDDIEVRFYEE-QDGVVVWD-ERVKTLEVHKQYAIVLKTPAYKSFEINDPVHVKIQLV 304
+ +V F E+ DG +W+ E + + + ++ P Y++ I PV V ++
Sbjct: 602 NFTSESKVVFTEKTTDGQQIWEMEATVDKDKSQPNMLFVEIPEYRNKHIRTPVKVNFYVI 661
Query: 305 T-KKDISEPYNFMLTPLDS 322
K+ S+P +F P+ +
Sbjct: 662 NGKRKRSQPQHFTYHPVPA 680
>sp|Q63638|SPEG_RAT Striated muscle-specific serine/threonine-protein kinase OS=Rattus
norvegicus GN=Speg PE=2 SV=2
Length = 3259
Score = 35.8 bits (81), Expect = 1.2, Method: Composition-based stats.
Identities = 38/147 (25%), Positives = 57/147 (38%), Gaps = 33/147 (22%)
Query: 522 QDIPTPPPE---VATPPVKPVALSNVKVVIPPASKV---------TTPPPRPPSHTKPNL 569
+ IP P PE A P P+AL + P +++ T P PPS KP+
Sbjct: 2218 EKIPEPKPEPVRAAKPAQPPLALQMPAQSLTPYAQIMQSLQLSSPTLSPQVPPSEPKPHA 2277
Query: 570 ATLQRKST-----------SDKFDSVSTHDDNIPPLPPKR-SRKSGLDKNLPPVPKYKSF 617
A R ++ S + V +P +PP+ S SG +NL
Sbjct: 2278 AVFARVASPPPGASEKRVPSARIPPVLAEKVRVPTVPPRPGSSLSGSIENLES------- 2330
Query: 618 FHKLFFKSKSKSKPATPRERSLSIDSR 644
+ F++K K +P R L + SR
Sbjct: 2331 --EAVFEAKFKRSRESPLSRGLRLLSR 2355
>sp|Q057S9|PYRH_BUCCC Uridylate kinase OS=Buchnera aphidicola subsp. Cinara cedri (strain
Cc) GN=pyrH PE=3 SV=1
Length = 239
Score = 35.4 bits (80), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 39/166 (23%), Positives = 69/166 (41%), Gaps = 23/166 (13%)
Query: 59 GRSAGSIMGANSTLECKSYPKIMIRNYVGDAHLVVSCVSKDSPYRSHPHKLVSKDNCTNG 118
G G ++G + KI +R + D ++S V H+ + N +
Sbjct: 46 GVQIGLVIGGGNLFRGSDLEKIGMRRSISDKIGMLSTVMNGLLL----HEFMQTANIKSK 101
Query: 119 IFCATLLEGDMTYSFTNLGIQCMKKKDIQAFRLYLQFCQRPFNSEKNSAWTLLGVMGFNN 178
IF +TLLEG + I+C++KK + F L PF + ++A + G
Sbjct: 102 IFSSTLLEGICERYHIDKAIKCLEKKSVAIFCFGLGI---PFFTTDSAAC----IYGTEI 154
Query: 179 RDNLDLNAVRLCFQAYLPKDKDNVIKLEPVV--SDIIYDAKTYSDL 222
+ N+ L A ++ D V +P++ S I+Y +Y D+
Sbjct: 155 KANILLKATKV----------DGVYSSDPILNKSAILYKNLSYKDI 190
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.315 0.132 0.384
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 269,357,525
Number of Sequences: 539616
Number of extensions: 12351195
Number of successful extensions: 45025
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 112
Number of HSP's successfully gapped in prelim test: 551
Number of HSP's that attempted gapping in prelim test: 39617
Number of HSP's gapped (non-prelim): 3873
length of query: 695
length of database: 191,569,459
effective HSP length: 125
effective length of query: 570
effective length of database: 124,117,459
effective search space: 70746951630
effective search space used: 70746951630
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (22.0 bits)
S2: 65 (29.6 bits)