BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy12709
(253 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|3LM0|A Chain A, Crystal Structure Of Human SerineTHREONINE KINASE 17B
(STK17B)
pdb|3LM5|A Chain A, Crystal Structure Of Human SerineTHREONINE KINASE 17B
(STK17B) IN Complex With Quercetin
Length = 327
Score = 252 bits (644), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 121/238 (50%), Positives = 168/238 (70%), Gaps = 5/238 (2%)
Query: 21 RGKFASVRKCTHKITKVEYAAKFIRKRRRSMDQMQDILHEAAVLYLAQKSERIVGLHEIY 80
RGKFA VR+C K T EYAAKF++KRRR D +ILHE AVL LA+ R++ LHE+Y
Sbjct: 39 RGKFAVVRQCISKSTGQEYAAKFLKKRRRGQDCRAEILHEIAVLELAKSCPRVINLHEVY 98
Query: 81 ETPHEMVLVLEMVPDGELQRLV--DIQDGIPEQDTRSYMKQILEALAFLHDHNITHLDLK 138
E E++L+LE GE+ L ++ + + E D +KQILE + +LH +NI HLDLK
Sbjct: 99 ENTSEIILILEYAAGGEIFSLCLPELAEMVSENDVIRLIKQILEGVYYLHQNNIVHLDLK 158
Query: 139 PQNILLTKD---NNIKLCDFGISRVVNDVVEVKEIIGTPDYVAPEVLSYEPISLATDMWS 195
PQNILL+ +IK+ DFG+SR + E++EI+GTP+Y+APE+L+Y+PI+ ATDMW+
Sbjct: 159 PQNILLSSIYPLGDIKIVDFGMSRKIGHACELREIMGTPEYLAPEILNYDPITTATDMWN 218
Query: 196 VGVLAYVLLSSHSPFAGDNKQETFLNISQCNFSFHEDLFGHISSQAKDFIQSCLVTDP 253
+G++AY+LL+ SPF G++ QET+LNISQ N + E+ F +S A DFIQS LV +P
Sbjct: 219 IGIIAYMLLTHTSPFVGEDNQETYLNISQVNVDYSEETFSSVSQLATDFIQSLLVKNP 276
>pdb|3DFC|B Chain B, Crystal Structure Of A Glycine-Rich Loop Mutant Of The
Death Associated Protein Kinase Catalytic Domain With
Amppnp
pdb|3DGK|A Chain A, Crystal Structure Of A Glycine-Rich Loop Mutant Of The
Death Associated Protein Kinase Catalytic Domain
Length = 295
Score = 214 bits (545), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 106/240 (44%), Positives = 154/240 (64%), Gaps = 9/240 (3%)
Query: 22 GKFASVRKCTHKITKVEYAAKFIRKRR----RSMDQMQDILHEAAVLYLAQKSERIVGLH 77
GKFA V+KC K T ++YAAKFI+KRR R +DI E ++L Q ++ LH
Sbjct: 22 GKFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHP-NVITLH 80
Query: 78 EIYETPHEMVLVLEMVPDGELQRLVDIQDGIPEQDTRSYMKQILEALAFLHDHNITHLDL 137
E+YE +++L+LE+V GEL + ++ + E++ ++KQIL + +LH I H DL
Sbjct: 81 EVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQILNGVYYLHSLQIAHFDL 140
Query: 138 KPQNILLTKDN----NIKLCDFGISRVVNDVVEVKEIIGTPDYVAPEVLSYEPISLATDM 193
KP+NI+L N IK+ DFG++ ++ E K I GTP++VAPE+++YEP+ L DM
Sbjct: 141 KPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPEFVAPEIVNYEPLGLEADM 200
Query: 194 WSVGVLAYVLLSSHSPFAGDNKQETFLNISQCNFSFHEDLFGHISSQAKDFIQSCLVTDP 253
WS+GV+ Y+LLS SPF GD KQET N+S N+ F ++ F + S+ AKDFI+ LV DP
Sbjct: 201 WSIGVITYILLSGASPFLGDTKQETLANVSAVNYEFEDEYFSNTSALAKDFIRRLLVKDP 260
>pdb|1Z9X|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
pdb|1Z9X|B Chain B, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
pdb|1Z9X|C Chain C, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
Length = 321
Score = 214 bits (545), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 107/240 (44%), Positives = 157/240 (65%), Gaps = 11/240 (4%)
Query: 22 GKFASVRKCTHKITKVEYAAKFIRKR-----RRSMDQMQDILHEAAVLYLAQKSERIVGL 76
G+FA V+KC K T +EYAAKFI+KR RR + + ++I E ++L ++ L
Sbjct: 23 GQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSR-EEIEREVSILRQVL-HHNVITL 80
Query: 77 HEIYETPHEMVLVLEMVPDGELQRLVDIQDGIPEQDTRSYMKQILEALAFLHDHNITHLD 136
H++YE ++VL+LE+V GEL + ++ + E++ S++KQIL+ + +LH I H D
Sbjct: 81 HDVYENRTDVVLILELVSGGELFDFLAQKESLSEEEATSFIKQILDGVNYLHTKKIAHFD 140
Query: 137 LKPQNILLTKDN----NIKLCDFGISRVVNDVVEVKEIIGTPDYVAPEVLSYEPISLATD 192
LKP+NI+L N +IKL DFG++ + D VE K I GTP++VAPE+++YEP+ L D
Sbjct: 141 LKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEFKNIFGTPEFVAPEIVNYEPLGLEAD 200
Query: 193 MWSVGVLAYVLLSSHSPFAGDNKQETFLNISQCNFSFHEDLFGHISSQAKDFIQSCLVTD 252
MWS+GV+ Y+LLS SPF GD KQET NI+ ++ F E+ F H S AKDFI+ LV +
Sbjct: 201 MWSIGVITYILLSGASPFLGDTKQETLANITSVSYDFDEEFFSHTSELAKDFIRKLLVKE 260
>pdb|2A2A|A Chain A, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|B Chain B, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|C Chain C, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|D Chain D, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2CKE|A Chain A, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|B Chain B, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|C Chain C, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|D Chain D, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
Length = 321
Score = 214 bits (545), Expect = 4e-56, Method: Compositional matrix adjust.
Identities = 107/240 (44%), Positives = 157/240 (65%), Gaps = 11/240 (4%)
Query: 22 GKFASVRKCTHKITKVEYAAKFIRKR-----RRSMDQMQDILHEAAVLYLAQKSERIVGL 76
G+FA V+KC K T +EYAAKFI+KR RR + + ++I E ++L ++ L
Sbjct: 23 GQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSR-EEIEREVSILRQVL-HHNVITL 80
Query: 77 HEIYETPHEMVLVLEMVPDGELQRLVDIQDGIPEQDTRSYMKQILEALAFLHDHNITHLD 136
H++YE ++VL+LE+V GEL + ++ + E++ S++KQIL+ + +LH I H D
Sbjct: 81 HDVYENRTDVVLILELVSGGELFDFLAQKESLSEEEATSFIKQILDGVNYLHTKKIAHFD 140
Query: 137 LKPQNILLTKDN----NIKLCDFGISRVVNDVVEVKEIIGTPDYVAPEVLSYEPISLATD 192
LKP+NI+L N +IKL DFG++ + D VE K I GTP++VAPE+++YEP+ L D
Sbjct: 141 LKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEFKNIFGTPEFVAPEIVNYEPLGLEAD 200
Query: 193 MWSVGVLAYVLLSSHSPFAGDNKQETFLNISQCNFSFHEDLFGHISSQAKDFIQSCLVTD 252
MWS+GV+ Y+LLS SPF GD KQET NI+ ++ F E+ F H S AKDFI+ LV +
Sbjct: 201 MWSIGVITYILLSGASPFLGDTKQETLANITSVSYDFDEEFFSHTSELAKDFIRKLLVKE 260
>pdb|1ZWS|A Chain A, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|B Chain B, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|C Chain C, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|D Chain D, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|E Chain E, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|F Chain F, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|G Chain G, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|H Chain H, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
Length = 288
Score = 214 bits (544), Expect = 5e-56, Method: Compositional matrix adjust.
Identities = 107/240 (44%), Positives = 157/240 (65%), Gaps = 11/240 (4%)
Query: 22 GKFASVRKCTHKITKVEYAAKFIRKR-----RRSMDQMQDILHEAAVLYLAQKSERIVGL 76
G+FA V+KC K T +EYAAKFI+KR RR + + ++I E ++L ++ L
Sbjct: 23 GQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSR-EEIEREVSILRQVL-HHNVITL 80
Query: 77 HEIYETPHEMVLVLEMVPDGELQRLVDIQDGIPEQDTRSYMKQILEALAFLHDHNITHLD 136
H++YE ++VL+LE+V GEL + ++ + E++ S++KQIL+ + +LH I H D
Sbjct: 81 HDVYENRTDVVLILELVSGGELFDFLAQKESLSEEEATSFIKQILDGVNYLHTKKIAHFD 140
Query: 137 LKPQNILLTKDN----NIKLCDFGISRVVNDVVEVKEIIGTPDYVAPEVLSYEPISLATD 192
LKP+NI+L N +IKL DFG++ + D VE K I GTP++VAPE+++YEP+ L D
Sbjct: 141 LKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEFKNIFGTPEFVAPEIVNYEPLGLEAD 200
Query: 193 MWSVGVLAYVLLSSHSPFAGDNKQETFLNISQCNFSFHEDLFGHISSQAKDFIQSCLVTD 252
MWS+GV+ Y+LLS SPF GD KQET NI+ ++ F E+ F H S AKDFI+ LV +
Sbjct: 201 MWSIGVITYILLSGASPFLGDTKQETLANITSVSYDFDEEFFSHTSELAKDFIRKLLVKE 260
>pdb|2W4K|A Chain A, X-Ray Structure Of A Dap-Kinase 2-302
Length = 302
Score = 214 bits (544), Expect = 5e-56, Method: Compositional matrix adjust.
Identities = 105/240 (43%), Positives = 154/240 (64%), Gaps = 9/240 (3%)
Query: 22 GKFASVRKCTHKITKVEYAAKFIRKRR----RSMDQMQDILHEAAVLYLAQKSERIVGLH 77
G+FA V+KC K T ++YAAKFI+KRR R +DI E ++L Q ++ LH
Sbjct: 22 GQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHP-NVITLH 80
Query: 78 EIYETPHEMVLVLEMVPDGELQRLVDIQDGIPEQDTRSYMKQILEALAFLHDHNITHLDL 137
E+YE +++L+LE+V GEL + ++ + E++ ++KQIL + +LH I H DL
Sbjct: 81 EVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQILNGVYYLHSLQIAHFDL 140
Query: 138 KPQNILLTKDN----NIKLCDFGISRVVNDVVEVKEIIGTPDYVAPEVLSYEPISLATDM 193
KP+NI+L N IK+ DFG++ ++ E K I GTP++VAPE+++YEP+ L DM
Sbjct: 141 KPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPEFVAPEIVNYEPLGLEADM 200
Query: 194 WSVGVLAYVLLSSHSPFAGDNKQETFLNISQCNFSFHEDLFGHISSQAKDFIQSCLVTDP 253
WS+GV+ Y+LLS SPF GD KQET N+S N+ F ++ F + S+ AKDFI+ LV DP
Sbjct: 201 WSIGVITYILLSGASPFLGDTKQETLANVSAVNYEFEDEYFSNTSALAKDFIRRLLVKDP 260
>pdb|2XZS|A Chain A, Death Associated Protein Kinase 1 Residues 1-312
pdb|2XZS|B Chain B, Death Associated Protein Kinase 1 Residues 1-312
Length = 312
Score = 213 bits (543), Expect = 6e-56, Method: Compositional matrix adjust.
Identities = 105/240 (43%), Positives = 154/240 (64%), Gaps = 9/240 (3%)
Query: 22 GKFASVRKCTHKITKVEYAAKFIRKRR----RSMDQMQDILHEAAVLYLAQKSERIVGLH 77
G+FA V+KC K T ++YAAKFI+KRR R +DI E ++L Q ++ LH
Sbjct: 22 GQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHP-NVITLH 80
Query: 78 EIYETPHEMVLVLEMVPDGELQRLVDIQDGIPEQDTRSYMKQILEALAFLHDHNITHLDL 137
E+YE +++L+LE+V GEL + ++ + E++ ++KQIL + +LH I H DL
Sbjct: 81 EVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQILNGVYYLHSLQIAHFDL 140
Query: 138 KPQNILLTKDN----NIKLCDFGISRVVNDVVEVKEIIGTPDYVAPEVLSYEPISLATDM 193
KP+NI+L N IK+ DFG++ ++ E K I GTP++VAPE+++YEP+ L DM
Sbjct: 141 KPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPEFVAPEIVNYEPLGLEADM 200
Query: 194 WSVGVLAYVLLSSHSPFAGDNKQETFLNISQCNFSFHEDLFGHISSQAKDFIQSCLVTDP 253
WS+GV+ Y+LLS SPF GD KQET N+S N+ F ++ F + S+ AKDFI+ LV DP
Sbjct: 201 WSIGVITYILLSGASPFLGDTKQETLANVSAVNYEFEDEYFSNTSALAKDFIRRLLVKDP 260
>pdb|2X0G|A Chain A, X-ray Structure Of A Dap-kinase Calmodulin Complex
Length = 334
Score = 213 bits (543), Expect = 7e-56, Method: Compositional matrix adjust.
Identities = 105/240 (43%), Positives = 154/240 (64%), Gaps = 9/240 (3%)
Query: 22 GKFASVRKCTHKITKVEYAAKFIRKRR----RSMDQMQDILHEAAVLYLAQKSERIVGLH 77
G+FA V+KC K T ++YAAKFI+KRR R +DI E ++L Q ++ LH
Sbjct: 22 GQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPN-VITLH 80
Query: 78 EIYETPHEMVLVLEMVPDGELQRLVDIQDGIPEQDTRSYMKQILEALAFLHDHNITHLDL 137
E+YE +++L+LE+V GEL + ++ + E++ ++KQIL + +LH I H DL
Sbjct: 81 EVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQILNGVYYLHSLQIAHFDL 140
Query: 138 KPQNILLTKDN----NIKLCDFGISRVVNDVVEVKEIIGTPDYVAPEVLSYEPISLATDM 193
KP+NI+L N IK+ DFG++ ++ E K I GTP++VAPE+++YEP+ L DM
Sbjct: 141 KPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPEFVAPEIVNYEPLGLEADM 200
Query: 194 WSVGVLAYVLLSSHSPFAGDNKQETFLNISQCNFSFHEDLFGHISSQAKDFIQSCLVTDP 253
WS+GV+ Y+LLS SPF GD KQET N+S N+ F ++ F + S+ AKDFI+ LV DP
Sbjct: 201 WSIGVITYILLSGASPFLGDTKQETLANVSAVNYEFEDEYFSNTSALAKDFIRRLLVKDP 260
>pdb|2Y0A|A Chain A, Structure Of Dapk1 Construct Residues 1-304
Length = 326
Score = 213 bits (542), Expect = 8e-56, Method: Compositional matrix adjust.
Identities = 105/240 (43%), Positives = 154/240 (64%), Gaps = 9/240 (3%)
Query: 22 GKFASVRKCTHKITKVEYAAKFIRKRR----RSMDQMQDILHEAAVLYLAQKSERIVGLH 77
G+FA V+KC K T ++YAAKFI+KRR R +DI E ++L Q ++ LH
Sbjct: 22 GQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHP-NVITLH 80
Query: 78 EIYETPHEMVLVLEMVPDGELQRLVDIQDGIPEQDTRSYMKQILEALAFLHDHNITHLDL 137
E+YE +++L+LE+V GEL + ++ + E++ ++KQIL + +LH I H DL
Sbjct: 81 EVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQILNGVYYLHSLQIAHFDL 140
Query: 138 KPQNILLTKDN----NIKLCDFGISRVVNDVVEVKEIIGTPDYVAPEVLSYEPISLATDM 193
KP+NI+L N IK+ DFG++ ++ E K I GTP++VAPE+++YEP+ L DM
Sbjct: 141 KPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPEFVAPEIVNYEPLGLEADM 200
Query: 194 WSVGVLAYVLLSSHSPFAGDNKQETFLNISQCNFSFHEDLFGHISSQAKDFIQSCLVTDP 253
WS+GV+ Y+LLS SPF GD KQET N+S N+ F ++ F + S+ AKDFI+ LV DP
Sbjct: 201 WSIGVITYILLSGASPFLGDTKQETLANVSAVNYEFEDEYFSNTSALAKDFIRRLLVKDP 260
>pdb|2YAK|A Chain A, Structure Of Death-Associated Protein Kinase 1 (Dapk1) In
Complex With A Ruthenium Octasporine Ligand (Osv)
pdb|2Y4P|A Chain A, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|B Chain B, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|C Chain C, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|D Chain D, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|3ZXT|A Chain A, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|B Chain B, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|C Chain C, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|D Chain D, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
Length = 285
Score = 213 bits (542), Expect = 8e-56, Method: Compositional matrix adjust.
Identities = 105/240 (43%), Positives = 154/240 (64%), Gaps = 9/240 (3%)
Query: 22 GKFASVRKCTHKITKVEYAAKFIRKRR----RSMDQMQDILHEAAVLYLAQKSERIVGLH 77
G+FA V+KC K T ++YAAKFI+KRR R +DI E ++L Q ++ LH
Sbjct: 22 GQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHP-NVITLH 80
Query: 78 EIYETPHEMVLVLEMVPDGELQRLVDIQDGIPEQDTRSYMKQILEALAFLHDHNITHLDL 137
E+YE +++L+LE+V GEL + ++ + E++ ++KQIL + +LH I H DL
Sbjct: 81 EVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQILNGVYYLHSLQIAHFDL 140
Query: 138 KPQNILLTKDN----NIKLCDFGISRVVNDVVEVKEIIGTPDYVAPEVLSYEPISLATDM 193
KP+NI+L N IK+ DFG++ ++ E K I GTP++VAPE+++YEP+ L DM
Sbjct: 141 KPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPEFVAPEIVNYEPLGLEADM 200
Query: 194 WSVGVLAYVLLSSHSPFAGDNKQETFLNISQCNFSFHEDLFGHISSQAKDFIQSCLVTDP 253
WS+GV+ Y+LLS SPF GD KQET N+S N+ F ++ F + S+ AKDFI+ LV DP
Sbjct: 201 WSIGVITYILLSGASPFLGDTKQETLANVSAVNYEFEDEYFSNTSALAKDFIRRLLVKDP 260
>pdb|2W4J|A Chain A, X-Ray Structure Of A Dap-Kinase 2-277
Length = 277
Score = 213 bits (542), Expect = 8e-56, Method: Compositional matrix adjust.
Identities = 105/240 (43%), Positives = 154/240 (64%), Gaps = 9/240 (3%)
Query: 22 GKFASVRKCTHKITKVEYAAKFIRKRR----RSMDQMQDILHEAAVLYLAQKSERIVGLH 77
G+FA V+KC K T ++YAAKFI+KRR R +DI E ++L Q ++ LH
Sbjct: 22 GQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHP-NVITLH 80
Query: 78 EIYETPHEMVLVLEMVPDGELQRLVDIQDGIPEQDTRSYMKQILEALAFLHDHNITHLDL 137
E+YE +++L+LE+V GEL + ++ + E++ ++KQIL + +LH I H DL
Sbjct: 81 EVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQILNGVYYLHSLQIAHFDL 140
Query: 138 KPQNILLTKDN----NIKLCDFGISRVVNDVVEVKEIIGTPDYVAPEVLSYEPISLATDM 193
KP+NI+L N IK+ DFG++ ++ E K I GTP++VAPE+++YEP+ L DM
Sbjct: 141 KPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPEFVAPEIVNYEPLGLEADM 200
Query: 194 WSVGVLAYVLLSSHSPFAGDNKQETFLNISQCNFSFHEDLFGHISSQAKDFIQSCLVTDP 253
WS+GV+ Y+LLS SPF GD KQET N+S N+ F ++ F + S+ AKDFI+ LV DP
Sbjct: 201 WSIGVITYILLSGASPFLGDTKQETLANVSAVNYEFEDEYFSNTSALAKDFIRRLLVKDP 260
>pdb|1WVW|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
pdb|1WVX|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
pdb|1WVY|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
Length = 278
Score = 213 bits (542), Expect = 8e-56, Method: Compositional matrix adjust.
Identities = 105/240 (43%), Positives = 154/240 (64%), Gaps = 9/240 (3%)
Query: 22 GKFASVRKCTHKITKVEYAAKFIRKRR----RSMDQMQDILHEAAVLYLAQKSERIVGLH 77
G+FA V+KC K T ++YAAKFI+KRR R +DI E ++L Q ++ LH
Sbjct: 22 GQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHP-NVITLH 80
Query: 78 EIYETPHEMVLVLEMVPDGELQRLVDIQDGIPEQDTRSYMKQILEALAFLHDHNITHLDL 137
E+YE +++L+LE+V GEL + ++ + E++ ++KQIL + +LH I H DL
Sbjct: 81 EVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQILNGVYYLHSLQIAHFDL 140
Query: 138 KPQNILLTKDN----NIKLCDFGISRVVNDVVEVKEIIGTPDYVAPEVLSYEPISLATDM 193
KP+NI+L N IK+ DFG++ ++ E K I GTP++VAPE+++YEP+ L DM
Sbjct: 141 KPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPEFVAPEIVNYEPLGLEADM 200
Query: 194 WSVGVLAYVLLSSHSPFAGDNKQETFLNISQCNFSFHEDLFGHISSQAKDFIQSCLVTDP 253
WS+GV+ Y+LLS SPF GD KQET N+S N+ F ++ F + S+ AKDFI+ LV DP
Sbjct: 201 WSIGVITYILLSGASPFLGDTKQETLANVSAVNYEFEDEYFSNTSALAKDFIRRLLVKDP 260
>pdb|3F5U|A Chain A, Crystal Structure Of The Death Associated Protein Kinase
In Complex With Amppnp And Mg2+
Length = 295
Score = 213 bits (542), Expect = 9e-56, Method: Compositional matrix adjust.
Identities = 105/240 (43%), Positives = 154/240 (64%), Gaps = 9/240 (3%)
Query: 22 GKFASVRKCTHKITKVEYAAKFIRKRR----RSMDQMQDILHEAAVLYLAQKSERIVGLH 77
G+FA V+KC K T ++YAAKFI+KRR R +DI E ++L Q ++ LH
Sbjct: 22 GQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHP-NVITLH 80
Query: 78 EIYETPHEMVLVLEMVPDGELQRLVDIQDGIPEQDTRSYMKQILEALAFLHDHNITHLDL 137
E+YE +++L+LE+V GEL + ++ + E++ ++KQIL + +LH I H DL
Sbjct: 81 EVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQILNGVYYLHSLQIAHFDL 140
Query: 138 KPQNILLTKDN----NIKLCDFGISRVVNDVVEVKEIIGTPDYVAPEVLSYEPISLATDM 193
KP+NI+L N IK+ DFG++ ++ E K I GTP++VAPE+++YEP+ L DM
Sbjct: 141 KPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPEFVAPEIVNYEPLGLEADM 200
Query: 194 WSVGVLAYVLLSSHSPFAGDNKQETFLNISQCNFSFHEDLFGHISSQAKDFIQSCLVTDP 253
WS+GV+ Y+LLS SPF GD KQET N+S N+ F ++ F + S+ AKDFI+ LV DP
Sbjct: 201 WSIGVITYILLSGASPFLGDTKQETLANVSAVNYEFEDEYFSNTSALAKDFIRRLLVKDP 260
>pdb|1IG1|A Chain A, 1.8a X-Ray Structure Of Ternary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue And Mn.
pdb|1JKL|A Chain A, 1.6a X-Ray Structure Of Binary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue
pdb|1JKS|A Chain A, 1.5a X-Ray Structure Of Apo Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKT|A Chain A, Tetragonal Crystal Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKT|B Chain B, Tetragonal Crystal Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKK|A Chain A, 2.4a X-Ray Structure Of Ternary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue And Mg.
pdb|3F5G|A Chain A, Crystal Structure Of Death Associated Protein Kinase In
Complex With Adp And Mg2+
pdb|3EH9|A Chain A, Crystal Structure Of Death Associated Protein Kinase
Complexed With Adp
pdb|3EHA|A Chain A, Crystal Structure Of Death Associated Protein Kinase
Complexed With Amppnp
Length = 294
Score = 213 bits (541), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 105/240 (43%), Positives = 154/240 (64%), Gaps = 9/240 (3%)
Query: 22 GKFASVRKCTHKITKVEYAAKFIRKRR----RSMDQMQDILHEAAVLYLAQKSERIVGLH 77
G+FA V+KC K T ++YAAKFI+KRR R +DI E ++L Q ++ LH
Sbjct: 21 GQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHP-NVITLH 79
Query: 78 EIYETPHEMVLVLEMVPDGELQRLVDIQDGIPEQDTRSYMKQILEALAFLHDHNITHLDL 137
E+YE +++L+LE+V GEL + ++ + E++ ++KQIL + +LH I H DL
Sbjct: 80 EVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQILNGVYYLHSLQIAHFDL 139
Query: 138 KPQNILLTKDN----NIKLCDFGISRVVNDVVEVKEIIGTPDYVAPEVLSYEPISLATDM 193
KP+NI+L N IK+ DFG++ ++ E K I GTP++VAPE+++YEP+ L DM
Sbjct: 140 KPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPEFVAPEIVNYEPLGLEADM 199
Query: 194 WSVGVLAYVLLSSHSPFAGDNKQETFLNISQCNFSFHEDLFGHISSQAKDFIQSCLVTDP 253
WS+GV+ Y+LLS SPF GD KQET N+S N+ F ++ F + S+ AKDFI+ LV DP
Sbjct: 200 WSIGVITYILLSGASPFLGDTKQETLANVSAVNYEFEDEYFSNTSALAKDFIRRLLVKDP 259
>pdb|1P4F|A Chain A, Death Associated Protein Kinase Catalytic Domain With
Bound Inhibitor Fragment
Length = 293
Score = 213 bits (541), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 105/240 (43%), Positives = 154/240 (64%), Gaps = 9/240 (3%)
Query: 22 GKFASVRKCTHKITKVEYAAKFIRKRR----RSMDQMQDILHEAAVLYLAQKSERIVGLH 77
G+FA V+KC K T ++YAAKFI+KRR R +DI E ++L Q ++ LH
Sbjct: 21 GQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHP-NVITLH 79
Query: 78 EIYETPHEMVLVLEMVPDGELQRLVDIQDGIPEQDTRSYMKQILEALAFLHDHNITHLDL 137
E+YE +++L+LE+V GEL + ++ + E++ ++KQIL + +LH I H DL
Sbjct: 80 EVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQILNGVYYLHSLQIAHFDL 139
Query: 138 KPQNILLTKDN----NIKLCDFGISRVVNDVVEVKEIIGTPDYVAPEVLSYEPISLATDM 193
KP+NI+L N IK+ DFG++ ++ E K I GTP++VAPE+++YEP+ L DM
Sbjct: 140 KPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPEFVAPEIVNYEPLGLEADM 199
Query: 194 WSVGVLAYVLLSSHSPFAGDNKQETFLNISQCNFSFHEDLFGHISSQAKDFIQSCLVTDP 253
WS+GV+ Y+LLS SPF GD KQET N+S N+ F ++ F + S+ AKDFI+ LV DP
Sbjct: 200 WSIGVITYILLSGASPFLGDTKQETLANVSAVNYEFEDEYFSNTSALAKDFIRRLLVKDP 259
>pdb|2XUU|A Chain A, Crystal Structure Of A Dap-Kinase 1 Mutant
Length = 334
Score = 212 bits (540), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 105/240 (43%), Positives = 153/240 (63%), Gaps = 9/240 (3%)
Query: 22 GKFASVRKCTHKITKVEYAAKFIRKRR----RSMDQMQDILHEAAVLYLAQKSERIVGLH 77
G+FA V+KC K T ++YAAKFI+KRR R +DI E ++L Q ++ LH
Sbjct: 22 GQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPN-VITLH 80
Query: 78 EIYETPHEMVLVLEMVPDGELQRLVDIQDGIPEQDTRSYMKQILEALAFLHDHNITHLDL 137
E+YE +++L+LE+V GEL + ++ + E++ ++KQIL + +LH I H DL
Sbjct: 81 EVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQILNGVYYLHSLQIAHFDL 140
Query: 138 KPQNILLTKDN----NIKLCDFGISRVVNDVVEVKEIIGTPDYVAPEVLSYEPISLATDM 193
KP+NI+L N IK+ DFG++ ++ E K I GTP +VAPE+++YEP+ L DM
Sbjct: 141 KPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPAFVAPEIVNYEPLGLEADM 200
Query: 194 WSVGVLAYVLLSSHSPFAGDNKQETFLNISQCNFSFHEDLFGHISSQAKDFIQSCLVTDP 253
WS+GV+ Y+LLS SPF GD KQET N+S N+ F ++ F + S+ AKDFI+ LV DP
Sbjct: 201 WSIGVITYILLSGASPFLGDTKQETLANVSAVNYEFEDEYFSNTSALAKDFIRRLLVKDP 260
>pdb|3BHY|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase
3 (Dapk3) In Complex With A Beta-Carboline Ligand
pdb|3BQR|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase
3 (Dapk3) In Complex With An Imidazo-Pyridazine Ligand
Length = 283
Score = 212 bits (539), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 109/240 (45%), Positives = 151/240 (62%), Gaps = 9/240 (3%)
Query: 22 GKFASVRKCTHKITKVEYAAKFIRKRRRSMDQM----QDILHEAAVLYLAQKSERIVGLH 77
G+FA VRKC K T EYAAKFI+KRR S + ++I E +L + I+ LH
Sbjct: 16 GQFAIVRKCRQKGTGKEYAAKFIKKRRLSSSRRGVSREEIEREVNILR-EIRHPNIITLH 74
Query: 78 EIYETPHEMVLVLEMVPDGELQRLVDIQDGIPEQDTRSYMKQILEALAFLHDHNITHLDL 137
+I+E ++VL+LE+V GEL + ++ + E + ++KQIL+ + +LH I H DL
Sbjct: 75 DIFENKTDVVLILELVSGGELFDFLAEKESLTEDEATQFLKQILDGVHYLHSKRIAHFDL 134
Query: 138 KPQNILLTKDN----NIKLCDFGISRVVNDVVEVKEIIGTPDYVAPEVLSYEPISLATDM 193
KP+NI+L N IKL DFGI+ + E K I GTP++VAPE+++YEP+ L DM
Sbjct: 135 KPENIMLLDKNVPNPRIKLIDFGIAHKIEAGNEFKNIFGTPEFVAPEIVNYEPLGLEADM 194
Query: 194 WSVGVLAYVLLSSHSPFAGDNKQETFLNISQCNFSFHEDLFGHISSQAKDFIQSCLVTDP 253
WS+GV+ Y+LLS SPF G+ KQET NIS N+ F E+ F + S AKDFI+ LV DP
Sbjct: 195 WSIGVITYILLSGASPFLGETKQETLTNISAVNYDFDEEYFSNTSELAKDFIRRLLVKDP 254
>pdb|1YRP|A Chain A, Catalytic Domain Of Human Zip Kinase Phosphorylated At
Thr265
pdb|1YRP|B Chain B, Catalytic Domain Of Human Zip Kinase Phosphorylated At
Thr265
Length = 278
Score = 211 bits (538), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 109/240 (45%), Positives = 151/240 (62%), Gaps = 9/240 (3%)
Query: 22 GKFASVRKCTHKITKVEYAAKFIRKRRRSMDQM----QDILHEAAVLYLAQKSERIVGLH 77
G+FA VRKC K T EYAAKFI+KRR S + ++I E +L + I+ LH
Sbjct: 23 GQFAIVRKCRQKGTGKEYAAKFIKKRRLSSSRRGVSREEIEREVNILR-EIRHPNIITLH 81
Query: 78 EIYETPHEMVLVLEMVPDGELQRLVDIQDGIPEQDTRSYMKQILEALAFLHDHNITHLDL 137
+I+E ++VL+LE+V GEL + ++ + E + ++KQIL+ + +LH I H DL
Sbjct: 82 DIFENKTDVVLILELVSGGELFDFLAEKESLTEDEATQFLKQILDGVHYLHSKRIAHFDL 141
Query: 138 KPQNILLTKDN----NIKLCDFGISRVVNDVVEVKEIIGTPDYVAPEVLSYEPISLATDM 193
KP+NI+L N IKL DFGI+ + E K I GTP++VAPE+++YEP+ L DM
Sbjct: 142 KPENIMLLDKNVPNPRIKLIDFGIAHKIEAGNEFKNIFGTPEFVAPEIVNYEPLGLEADM 201
Query: 194 WSVGVLAYVLLSSHSPFAGDNKQETFLNISQCNFSFHEDLFGHISSQAKDFIQSCLVTDP 253
WS+GV+ Y+LLS SPF G+ KQET NIS N+ F E+ F + S AKDFI+ LV DP
Sbjct: 202 WSIGVITYILLSGASPFLGETKQETLTNISAVNYDFDEEYFSNTSELAKDFIRRLLVKDP 261
>pdb|2J90|A Chain A, Crystal Structure Of Human Zip Kinase In Complex With A
Tetracyclic Pyridone Inhibitor (pyridone 6)
pdb|2J90|B Chain B, Crystal Structure Of Human Zip Kinase In Complex With A
Tetracyclic Pyridone Inhibitor (pyridone 6)
Length = 304
Score = 211 bits (538), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 109/240 (45%), Positives = 150/240 (62%), Gaps = 9/240 (3%)
Query: 22 GKFASVRKCTHKITKVEYAAKFIRKRR----RSMDQMQDILHEAAVLYLAQKSERIVGLH 77
G+FA VRKC K T EYAAKFI+KRR R ++I E +L + I+ LH
Sbjct: 37 GQFAIVRKCRQKGTGKEYAAKFIKKRRLXSSRRGVSREEIEREVNILR-EIRHPNIITLH 95
Query: 78 EIYETPHEMVLVLEMVPDGELQRLVDIQDGIPEQDTRSYMKQILEALAFLHDHNITHLDL 137
+I+E ++VL+LE+V GEL + ++ + E + ++KQIL+ + +LH I H DL
Sbjct: 96 DIFENKTDVVLILELVSGGELFDFLAEKESLTEDEATQFLKQILDGVHYLHSKRIAHFDL 155
Query: 138 KPQNILLTKDN----NIKLCDFGISRVVNDVVEVKEIIGTPDYVAPEVLSYEPISLATDM 193
KP+NI+L N IKL DFGI+ + E K I GTP++VAPE+++YEP+ L DM
Sbjct: 156 KPENIMLLDKNVPNPRIKLIDFGIAHKIEAGNEFKNIFGTPEFVAPEIVNYEPLGLEADM 215
Query: 194 WSVGVLAYVLLSSHSPFAGDNKQETFLNISQCNFSFHEDLFGHISSQAKDFIQSCLVTDP 253
WS+GV+ Y+LLS SPF G+ KQET NIS N+ F E+ F + S AKDFI+ LV DP
Sbjct: 216 WSIGVITYILLSGASPFLGETKQETLTNISAVNYDFDEEYFSNTSELAKDFIRRLLVKDP 275
>pdb|3GU4|A Chain A, Crystal Structure Of Dapkq23v-Amppnp
pdb|3GU5|A Chain A, Crystal Structure Of Dapkq23v-Amppnp-Mg2+
pdb|3GU6|A Chain A, Crystal Structure Of Dapkq23v-Adp
pdb|3GU7|A Chain A, Crystal Structure Of Dapkq23v-Adp-Mg2+
Length = 295
Score = 211 bits (537), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 105/240 (43%), Positives = 153/240 (63%), Gaps = 9/240 (3%)
Query: 22 GKFASVRKCTHKITKVEYAAKFIRKRR----RSMDQMQDILHEAAVLYLAQKSERIVGLH 77
G FA V+KC K T ++YAAKFI+KRR R +DI E ++L Q ++ LH
Sbjct: 22 GVFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHP-NVITLH 80
Query: 78 EIYETPHEMVLVLEMVPDGELQRLVDIQDGIPEQDTRSYMKQILEALAFLHDHNITHLDL 137
E+YE +++L+LE+V GEL + ++ + E++ ++KQIL + +LH I H DL
Sbjct: 81 EVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQILNGVYYLHSLQIAHFDL 140
Query: 138 KPQNILLTKDN----NIKLCDFGISRVVNDVVEVKEIIGTPDYVAPEVLSYEPISLATDM 193
KP+NI+L N IK+ DFG++ ++ E K I GTP++VAPE+++YEP+ L DM
Sbjct: 141 KPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPEFVAPEIVNYEPLGLEADM 200
Query: 194 WSVGVLAYVLLSSHSPFAGDNKQETFLNISQCNFSFHEDLFGHISSQAKDFIQSCLVTDP 253
WS+GV+ Y+LLS SPF GD KQET N+S N+ F ++ F + S+ AKDFI+ LV DP
Sbjct: 201 WSIGVITYILLSGASPFLGDTKQETLANVSAVNYEFEDEYFSNTSALAKDFIRRLLVKDP 260
>pdb|2A27|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|B Chain B, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|C Chain C, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|D Chain D, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|E Chain E, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|F Chain F, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|G Chain G, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|H Chain H, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
Length = 321
Score = 211 bits (537), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 106/240 (44%), Positives = 156/240 (65%), Gaps = 11/240 (4%)
Query: 22 GKFASVRKCTHKITKVEYAAKFIRKR-----RRSMDQMQDILHEAAVLYLAQKSERIVGL 76
G+FA V+KC K T +EYAAKFI+KR RR + + ++I E ++L ++ L
Sbjct: 23 GQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSR-EEIEREVSILRQVL-HHNVITL 80
Query: 77 HEIYETPHEMVLVLEMVPDGELQRLVDIQDGIPEQDTRSYMKQILEALAFLHDHNITHLD 136
H++YE ++VL+LE+V GEL + ++ + E++ S++KQIL+ + +LH I H D
Sbjct: 81 HDVYENRTDVVLILELVSGGELFDFLAQKESLSEEEATSFIKQILDGVNYLHTKKIAHFD 140
Query: 137 LKPQNILLTKDN----NIKLCDFGISRVVNDVVEVKEIIGTPDYVAPEVLSYEPISLATD 192
LKP+NI+L N +IKL DFG++ + D VE K I GTP++VAPE+++YEP+ L D
Sbjct: 141 LKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEFKNIFGTPEFVAPEIVNYEPLGLEAD 200
Query: 193 MWSVGVLAYVLLSSHSPFAGDNKQETFLNISQCNFSFHEDLFGHISSQAKDFIQSCLVTD 252
MWS+GV+ Y+LLS SPF GD KQET NI+ ++ F E+ F S AKDFI+ LV +
Sbjct: 201 MWSIGVITYILLSGASPFLGDTKQETLANITAVSYDFDEEFFSQTSELAKDFIRKLLVKE 260
>pdb|1WMK|A Chain A, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|E Chain E, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|C Chain C, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|B Chain B, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|F Chain F, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|D Chain D, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|H Chain H, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|G Chain G, Human Death-Associated Kinase Drp-1, Mutant S308d D40
Length = 321
Score = 211 bits (537), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 106/240 (44%), Positives = 156/240 (65%), Gaps = 11/240 (4%)
Query: 22 GKFASVRKCTHKITKVEYAAKFIRKR-----RRSMDQMQDILHEAAVLYLAQKSERIVGL 76
G+FA V+KC K T +EYAAKFI+KR RR + + ++I E ++L ++ L
Sbjct: 23 GQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSR-EEIEREVSILRQVL-HHNVITL 80
Query: 77 HEIYETPHEMVLVLEMVPDGELQRLVDIQDGIPEQDTRSYMKQILEALAFLHDHNITHLD 136
H++YE ++VL+LE+V GEL + ++ + E++ S++KQIL+ + +LH I H D
Sbjct: 81 HDVYENRTDVVLILELVSGGELFDFLAQKESLSEEEATSFIKQILDGVNYLHTKKIAHFD 140
Query: 137 LKPQNILLTKDN----NIKLCDFGISRVVNDVVEVKEIIGTPDYVAPEVLSYEPISLATD 192
LKP+NI+L N +IKL DFG++ + D VE K I GTP++VAPE+++YEP+ L D
Sbjct: 141 LKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEFKNIFGTPEFVAPEIVNYEPLGLEAD 200
Query: 193 MWSVGVLAYVLLSSHSPFAGDNKQETFLNISQCNFSFHEDLFGHISSQAKDFIQSCLVTD 252
MWS+GV+ Y+LLS SPF GD KQET NI+ ++ F E+ F S AKDFI+ LV +
Sbjct: 201 MWSIGVITYILLSGASPFLGDTKQETLANITAVSYDFDEEFFSQTSELAKDFIRKLLVKE 260
>pdb|2YA9|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
pdb|2YA9|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
pdb|2YAA|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Atp
pdb|2YAA|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Atp
pdb|2YAB|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Amp
pdb|2YAB|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Amp
Length = 361
Score = 210 bits (535), Expect = 5e-55, Method: Compositional matrix adjust.
Identities = 105/239 (43%), Positives = 154/239 (64%), Gaps = 9/239 (3%)
Query: 22 GKFASVRKCTHKITKVEYAAKFIRKRRRSMDQM----QDILHEAAVLYLAQKSERIVGLH 77
G+FA V+KC K T +EYAAKFI+KR+ + ++I E ++L I+ LH
Sbjct: 23 GQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVCREEIEREVSILRQVLHPN-IITLH 81
Query: 78 EIYETPHEMVLVLEMVPDGELQRLVDIQDGIPEQDTRSYMKQILEALAFLHDHNITHLDL 137
++YE ++VL+LE+V GEL + ++ + E++ S++KQIL+ + +LH I H DL
Sbjct: 82 DVYENRTDVVLILELVSGGELFDFLAQKESLSEEEATSFIKQILDGVNYLHTKKIAHFDL 141
Query: 138 KPQNILLTKDN----NIKLCDFGISRVVNDVVEVKEIIGTPDYVAPEVLSYEPISLATDM 193
KP+NI+L N +IKL DFG++ + D VE K I GTP++VAPE+++YEP+ L DM
Sbjct: 142 KPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEFKNIFGTPEFVAPEIVNYEPLGLEADM 201
Query: 194 WSVGVLAYVLLSSHSPFAGDNKQETFLNISQCNFSFHEDLFGHISSQAKDFIQSCLVTD 252
WS+GV+ Y+LLS SPF GD KQET NI+ ++ F E+ F S AKDFI+ LV +
Sbjct: 202 WSIGVITYILLSGASPFLGDTKQETLANITAVSYDFDEEFFSQTSELAKDFIRKLLVKE 260
>pdb|3GU8|A Chain A, Crystal Structure Of Dapkl93g With N6-Cyclopentyladenosine
pdb|3GUB|A Chain A, Crystal Structure Of Dapkl93g Complexed With N6-(2-
Phenylethyl)adenosine
Length = 295
Score = 210 bits (534), Expect = 6e-55, Method: Compositional matrix adjust.
Identities = 104/240 (43%), Positives = 153/240 (63%), Gaps = 9/240 (3%)
Query: 22 GKFASVRKCTHKITKVEYAAKFIRKRR----RSMDQMQDILHEAAVLYLAQKSERIVGLH 77
G+FA V+KC K T ++YAAKFI+KRR R +DI E ++L Q ++ LH
Sbjct: 22 GQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHP-NVITLH 80
Query: 78 EIYETPHEMVLVLEMVPDGELQRLVDIQDGIPEQDTRSYMKQILEALAFLHDHNITHLDL 137
E+YE +++L+ E+V GEL + ++ + E++ ++KQIL + +LH I H DL
Sbjct: 81 EVYENKTDVILIGELVAGGELFDFLAEKESLTEEEATEFLKQILNGVYYLHSLQIAHFDL 140
Query: 138 KPQNILLTKDN----NIKLCDFGISRVVNDVVEVKEIIGTPDYVAPEVLSYEPISLATDM 193
KP+NI+L N IK+ DFG++ ++ E K I GTP++VAPE+++YEP+ L DM
Sbjct: 141 KPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPEFVAPEIVNYEPLGLEADM 200
Query: 194 WSVGVLAYVLLSSHSPFAGDNKQETFLNISQCNFSFHEDLFGHISSQAKDFIQSCLVTDP 253
WS+GV+ Y+LLS SPF GD KQET N+S N+ F ++ F + S+ AKDFI+ LV DP
Sbjct: 201 WSIGVITYILLSGASPFLGDTKQETLANVSAVNYEFEDEYFSNTSALAKDFIRRLLVKDP 260
>pdb|2X4F|A Chain A, The Crystal Structure Of The Human Myosin Light Chain
Kinase Loc340156.
pdb|2X4F|B Chain B, The Crystal Structure Of The Human Myosin Light Chain
Kinase Loc340156
Length = 373
Score = 169 bits (429), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 94/234 (40%), Positives = 145/234 (61%), Gaps = 6/234 (2%)
Query: 22 GKFASVRKCTHKITKVEYAAKFIRKRRRSMDQMQDILHEAAVLYLAQKSERIVGLHEIYE 81
G+F V KC T ++ AAK I+ R M +++ +E +V+ + ++ L++ +E
Sbjct: 100 GRFGQVHKCEETATGLKLAAKIIKTR--GMKDKEEVKNEISVMNQLDHA-NLIQLYDAFE 156
Query: 82 TPHEMVLVLEMVPDGEL-QRLVDIQDGIPEQDTRSYMKQILEALAFLHDHNITHLDLKPQ 140
+ +++VLV+E V GEL R++D + E DT +MKQI E + +H I HLDLKP+
Sbjct: 157 SKNDIVLVMEYVDGGELFDRIIDESYNLTELDTILFMKQICEGIRHMHQMYILHLDLKPE 216
Query: 141 NIL-LTKD-NNIKLCDFGISRVVNDVVEVKEIIGTPDYVAPEVLSYEPISLATDMWSVGV 198
NIL + +D IK+ DFG++R ++K GTP+++APEV++Y+ +S TDMWSVGV
Sbjct: 217 NILCVNRDAKQIKIIDFGLARRYKPREKLKVNFGTPEFLAPEVVNYDFVSFPTDMWSVGV 276
Query: 199 LAYVLLSSHSPFAGDNKQETFLNISQCNFSFHEDLFGHISSQAKDFIQSCLVTD 252
+AY+LLS SPF GDN ET NI C + ++ F IS +AK+FI L+ +
Sbjct: 277 IAYMLLSGLSPFLGDNDAETLNNILACRWDLEDEEFQDISEEAKEFISKLLIKE 330
>pdb|3UTO|A Chain A, Twitchin Kinase Region From C.Elegans
(Fn31-Nl-Kin-Crd-Ig26)
pdb|3UTO|B Chain B, Twitchin Kinase Region From C.Elegans
(Fn31-Nl-Kin-Crd-Ig26)
Length = 573
Score = 168 bits (426), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 87/236 (36%), Positives = 138/236 (58%), Gaps = 8/236 (3%)
Query: 22 GKFASVRKCTHKITKVEYAAKFIRKRRRS-MDQMQDILHEAAVLYLAQKSERIVGLHEIY 80
G F V + T + T +AAKF+ S + ++ + +VL + +V LH+ +
Sbjct: 168 GAFGVVHRVTERATGNNFAAKFVMTPHESDKETVRKEIQTMSVL----RHPTLVNLHDAF 223
Query: 81 ETPHEMVLVLEMVPDGEL-QRLVDIQDGIPEQDTRSYMKQILEALAFLHDHNITHLDLKP 139
E +EMV++ E + GEL +++ D + + E + YM+Q+ + L +H++N HLDLKP
Sbjct: 224 EDDNEMVMIYEFMSGGELFEKVADEHNKMSEDEAVEYMRQVCKGLCHMHENNYVHLDLKP 283
Query: 140 QNILLT--KDNNIKLCDFGISRVVNDVVEVKEIIGTPDYVAPEVLSYEPISLATDMWSVG 197
+NI+ T + N +KL DFG++ ++ VK GT ++ APEV +P+ TDMWSVG
Sbjct: 284 ENIMFTTKRSNELKLIDFGLTAHLDPKQSVKVTTGTAEFAAPEVAEGKPVGYYTDMWSVG 343
Query: 198 VLAYVLLSSHSPFAGDNKQETFLNISQCNFSFHEDLFGHISSQAKDFIQSCLVTDP 253
VL+Y+LLS SPF G+N ET N+ C+++ + F IS KDFI+ L+ DP
Sbjct: 344 VLSYILLSGLSPFGGENDDETLRNVKSCDWNMDDSAFSGISEDGKDFIRKLLLADP 399
>pdb|1KOA|A Chain A, Twitchin Kinase Fragment (C.Elegans), Autoregulated
Protein Kinase And Immunoglobulin Domains
Length = 491
Score = 168 bits (426), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 87/236 (36%), Positives = 138/236 (58%), Gaps = 8/236 (3%)
Query: 22 GKFASVRKCTHKITKVEYAAKFIRKRRRS-MDQMQDILHEAAVLYLAQKSERIVGLHEIY 80
G F V + T + T +AAKF+ S + ++ + +VL + +V LH+ +
Sbjct: 62 GAFGVVHRVTERATGNNFAAKFVMTPHESDKETVRKEIQTMSVL----RHPTLVNLHDAF 117
Query: 81 ETPHEMVLVLEMVPDGEL-QRLVDIQDGIPEQDTRSYMKQILEALAFLHDHNITHLDLKP 139
E +EMV++ E + GEL +++ D + + E + YM+Q+ + L +H++N HLDLKP
Sbjct: 118 EDDNEMVMIYEFMSGGELFEKVADEHNKMSEDEAVEYMRQVCKGLCHMHENNYVHLDLKP 177
Query: 140 QNILLT--KDNNIKLCDFGISRVVNDVVEVKEIIGTPDYVAPEVLSYEPISLATDMWSVG 197
+NI+ T + N +KL DFG++ ++ VK GT ++ APEV +P+ TDMWSVG
Sbjct: 178 ENIMFTTKRSNELKLIDFGLTAHLDPKQSVKVTTGTAEFAAPEVAEGKPVGYYTDMWSVG 237
Query: 198 VLAYVLLSSHSPFAGDNKQETFLNISQCNFSFHEDLFGHISSQAKDFIQSCLVTDP 253
VL+Y+LLS SPF G+N ET N+ C+++ + F IS KDFI+ L+ DP
Sbjct: 238 VLSYILLSGLSPFGGENDDETLRNVKSCDWNMDDSAFSGISEDGKDFIRKLLLADP 293
>pdb|1KOB|A Chain A, Twitchin Kinase Fragment (Aplysia), Autoregulated Protein
Kinase Domain
pdb|1KOB|B Chain B, Twitchin Kinase Fragment (Aplysia), Autoregulated Protein
Kinase Domain
Length = 387
Score = 167 bits (422), Expect = 6e-42, Method: Compositional matrix adjust.
Identities = 88/235 (37%), Positives = 142/235 (60%), Gaps = 6/235 (2%)
Query: 22 GKFASVRKCTHKITKVEYAAKFIRKRRRSMDQMQDILHEAAVLYLAQKSERIVGLHEIYE 81
G F V +C K T + AKFI +D+ + +E +++ +++ LH+ +E
Sbjct: 62 GAFGVVHRCVEKATGRVFVAKFINTPY-PLDKYT-VKNEISIMNQLHHP-KLINLHDAFE 118
Query: 82 TPHEMVLVLEMVPDGELQRLVDIQD-GIPEQDTRSYMKQILEALAFLHDHNITHLDLKPQ 140
+EMVL+LE + GEL + +D + E + +YM+Q E L +H+H+I HLD+KP+
Sbjct: 119 DKYEMVLILEFLSGGELFDRIAAEDYKMSEAEVINYMRQACEGLKHMHEHSIVHLDIKPE 178
Query: 141 NIL--LTKDNNIKLCDFGISRVVNDVVEVKEIIGTPDYVAPEVLSYEPISLATDMWSVGV 198
NI+ K +++K+ DFG++ +N VK T ++ APE++ EP+ TDMW++GV
Sbjct: 179 NIMCETKKASSVKIIDFGLATKLNPDEIVKVTTATAEFAAPEIVDREPVGFYTDMWAIGV 238
Query: 199 LAYVLLSSHSPFAGDNKQETFLNISQCNFSFHEDLFGHISSQAKDFIQSCLVTDP 253
L YVLLS SPFAG++ ET N+ +C++ F ED F +S +AKDFI++ L +P
Sbjct: 239 LGYVLLSGLSPFAGEDDLETLQNVKRCDWEFDEDAFSSVSPEAKDFIKNLLQKEP 293
>pdb|2W4O|A Chain A, Crystal Structure Of Human Camk4 In Complex With 4-Amino(
Sulfamoyl-Phenylamino)-Triazole-Carbothioic Acid (2,6-
Difluoro-Phenyl)-Amide)
Length = 349
Score = 150 bits (378), Expect = 9e-37, Method: Compositional matrix adjust.
Identities = 92/239 (38%), Positives = 135/239 (56%), Gaps = 11/239 (4%)
Query: 20 SRGKFASVRKCTHKITKVEYAAKFIRKRRRSMDQMQDILHEAAVLYLAQKSERIVGLHEI 79
RG + V +C K T+ YA K ++K ++D+ + + E VL L I+ L EI
Sbjct: 62 GRGATSIVYRCKQKGTQKPYALKVLKK---TVDK-KIVRTEIGVL-LRLSHPNIIKLKEI 116
Query: 80 YETPHEMVLVLEMVPDGEL-QRLVDIQDGIPEQDTRSYMKQILEALAFLHDHNITHLDLK 138
+ETP E+ LVLE+V GEL R+V+ + E+D +KQILEA+A+LH++ I H DLK
Sbjct: 117 FETPTEISLVLELVTGGELFDRIVE-KGYYSERDAADAVKQILEAVAYLHENGIVHRDLK 175
Query: 139 PQNILLTK---DNNIKLCDFGISRVVNDVVEVKEIIGTPDYVAPEVLSYEPISLATDMWS 195
P+N+L D +K+ DFG+S++V V +K + GTP Y APE+L DMWS
Sbjct: 176 PENLLYATPAPDAPLKIADFGLSKIVEHQVLMKTVCGTPGYCAPEILRGCAYGPEVDMWS 235
Query: 196 VGVLAYVLLSSHSPFAGD-NKQETFLNISQCNFSFHEDLFGHISSQAKDFIQSCLVTDP 253
VG++ Y+LL PF + Q F I C + F + +S AKD ++ +V DP
Sbjct: 236 VGIITYILLCGFEPFYDERGDQFMFRRILNCEYYFISPWWDEVSLNAKDLVRKLIVLDP 294
>pdb|1TKI|A Chain A, Autoinhibited Serine Kinase Domain Of The Giant Muscle
Protein Titin
pdb|1TKI|B Chain B, Autoinhibited Serine Kinase Domain Of The Giant Muscle
Protein Titin
Length = 321
Score = 148 bits (373), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 82/235 (34%), Positives = 136/235 (57%), Gaps = 7/235 (2%)
Query: 21 RGKFASVRKCTHKITKVEYAAKFIRKRRRSMDQMQDILHEAAVLYLAQKSERIVGLHEIY 80
RG+F V +C +K Y AKF++ + DQ+ + E ++L +A + I+ LHE +
Sbjct: 15 RGEFGIVHRCVETSSKKTYMAKFVKVK--GTDQVL-VKKEISILNIA-RHRNILHLHESF 70
Query: 81 ETPHEMVLVLEMVPDGEL-QRLVDIQDGIPEQDTRSYMKQILEALAFLHDHNITHLDLKP 139
E+ E+V++ E + ++ +R+ + E++ SY+ Q+ EAL FLH HNI H D++P
Sbjct: 71 ESMEELVMIFEFISGLDIFERINTSAFELNEREIVSYVHQVCEALQFLHSHNIGHFDIRP 130
Query: 140 QNILLT--KDNNIKLCDFGISRVVNDVVEVKEIIGTPDYVAPEVLSYEPISLATDMWSVG 197
+NI+ + + IK+ +FG +R + + + P+Y APEV ++ +S ATDMWS+G
Sbjct: 131 ENIIYQTRRSSTIKIIEFGQARQLKPGDNFRLLFTAPEYYAPEVHQHDVVSTATDMWSLG 190
Query: 198 VLAYVLLSSHSPFAGDNKQETFLNISQCNFSFHEDLFGHISSQAKDFIQSCLVTD 252
L YVLLS +PF + Q+ NI ++F E+ F IS +A DF+ LV +
Sbjct: 191 TLVYVLLSGINPFLAETNQQIIENIMNAEYTFDEEAFKEISIEAMDFVDRLLVKE 245
>pdb|2JC6|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase 1d
pdb|2JC6|C Chain C, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase 1d
Length = 334
Score = 145 bits (367), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 88/236 (37%), Positives = 135/236 (57%), Gaps = 7/236 (2%)
Query: 22 GKFASVRKCTHKITKVEYAAKFIRKRRRSMDQMQDILHEAAVLYLAQKSERIVGLHEIYE 81
G F+ V K T +A K I K+ + I +E AVL K E IV L +IYE
Sbjct: 33 GAFSEVVLAEEKATGKLFAVKCIPKKALKGKE-SSIENEIAVLRKI-KHENIVALEDIYE 90
Query: 82 TPHEMVLVLEMVPDGEL-QRLVDIQDGIPEQDTRSYMKQILEALAFLHDHNITHLDLKPQ 140
+P+ + LV+++V GEL R+V+ + E+D + ++Q+L+A+ +LH I H DLKP+
Sbjct: 91 SPNHLYLVMQLVSGGELFDRIVE-KGFYTEKDASTLIRQVLDAVYYLHRMGIVHRDLKPE 149
Query: 141 NILL---TKDNNIKLCDFGISRVVNDVVEVKEIIGTPDYVAPEVLSYEPISLATDMWSVG 197
N+L +++ I + DFG+S++ + GTP YVAPEVL+ +P S A D WS+G
Sbjct: 150 NLLYYSQDEESKIMISDFGLSKMEGKGDVMSTACGTPGYVAPEVLAQKPYSKAVDCWSIG 209
Query: 198 VLAYVLLSSHSPFAGDNKQETFLNISQCNFSFHEDLFGHISSQAKDFIQSCLVTDP 253
V+AY+LL + PF +N + F I + + F + IS AKDFI++ + DP
Sbjct: 210 VIAYILLCGYPPFYDENDSKLFEQILKAEYEFDSPYWDDISDSAKDFIRNLMEKDP 265
>pdb|3KL8|A Chain A, Camkiintide Inhibitor Complex
pdb|3KL8|C Chain C, Camkiintide Inhibitor Complex
pdb|3KL8|E Chain E, Camkiintide Inhibitor Complex
pdb|3KL8|G Chain G, Camkiintide Inhibitor Complex
pdb|3KL8|I Chain I, Camkiintide Inhibitor Complex
Length = 269
Score = 143 bits (360), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 79/237 (33%), Positives = 126/237 (53%), Gaps = 4/237 (1%)
Query: 20 SRGKFASVRKCTHKITKVEYAAKFIRKRRRSMDQMQDILHEAAVLYLAQKSERIVGLHEI 79
+G F+ VR+C HK T +E+AAK I ++ S Q + EA + Q IV LH+
Sbjct: 15 GKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHP-NIVRLHDS 73
Query: 80 YETPHEMVLVLEMVPDGELQRLVDIQDGIPEQDTRSYMKQILEALAFLHDHNITHLDLKP 139
+ LV ++V GEL + ++ E D ++QILE++A+ H + I H +LKP
Sbjct: 74 IQEESFHYLVFDLVTGGELFEDIVAREFYSEADASHCIQQILESIAYCHSNGIVHRNLKP 133
Query: 140 QNILLT---KDNNIKLCDFGISRVVNDVVEVKEIIGTPDYVAPEVLSYEPISLATDMWSV 196
+N+LL K +KL DFG++ VND GTP Y++PEVL +P S D+W+
Sbjct: 134 ENLLLASKAKGAAVKLADFGLAIEVNDSEAWHGFAGTPGYLSPEVLKKDPYSKPVDIWAC 193
Query: 197 GVLAYVLLSSHSPFAGDNKQETFLNISQCNFSFHEDLFGHISSQAKDFIQSCLVTDP 253
GV+ Y+LL + PF +++ + I + + + ++ +AK I S L +P
Sbjct: 194 GVILYILLVGYPPFWDEDQHRLYAQIKAGAYDYPSPEWDTVTPEAKSLIDSMLTVNP 250
>pdb|2BDW|A Chain A, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
pdb|2BDW|B Chain B, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
Length = 362
Score = 142 bits (359), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 79/237 (33%), Positives = 126/237 (53%), Gaps = 4/237 (1%)
Query: 20 SRGKFASVRKCTHKITKVEYAAKFIRKRRRSMDQMQDILHEAAVLYLAQKSERIVGLHEI 79
+G F+ VR+C HK T +E+AAK I ++ S Q + EA + Q IV LH+
Sbjct: 38 GKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPN-IVRLHDS 96
Query: 80 YETPHEMVLVLEMVPDGELQRLVDIQDGIPEQDTRSYMKQILEALAFLHDHNITHLDLKP 139
+ LV ++V GEL + ++ E D ++QILE++A+ H + I H +LKP
Sbjct: 97 IQEESFHYLVFDLVTGGELFEDIVAREFYSEADASHCIQQILESIAYCHSNGIVHRNLKP 156
Query: 140 QNILLT---KDNNIKLCDFGISRVVNDVVEVKEIIGTPDYVAPEVLSYEPISLATDMWSV 196
+N+LL K +KL DFG++ VND GTP Y++PEVL +P S D+W+
Sbjct: 157 ENLLLASKAKGAAVKLADFGLAIEVNDSEAWHGFAGTPGYLSPEVLKKDPYSKPVDIWAC 216
Query: 197 GVLAYVLLSSHSPFAGDNKQETFLNISQCNFSFHEDLFGHISSQAKDFIQSCLVTDP 253
GV+ Y+LL + PF +++ + I + + + ++ +AK I S L +P
Sbjct: 217 GVILYILLVGYPPFWDEDQHRLYAQIKAGAYDYPSPEWDTVTPEAKSLIDSMLTVNP 273
>pdb|3KK8|A Chain A, Camkii Substrate Complex A
Length = 284
Score = 142 bits (359), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 79/237 (33%), Positives = 126/237 (53%), Gaps = 4/237 (1%)
Query: 20 SRGKFASVRKCTHKITKVEYAAKFIRKRRRSMDQMQDILHEAAVLYLAQKSERIVGLHEI 79
+G F+ VR+C HK T +E+AAK I ++ S Q + EA + Q IV LH+
Sbjct: 15 GKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPN-IVRLHDS 73
Query: 80 YETPHEMVLVLEMVPDGELQRLVDIQDGIPEQDTRSYMKQILEALAFLHDHNITHLDLKP 139
+ LV ++V GEL + ++ E D ++QILE++A+ H + I H +LKP
Sbjct: 74 IQEESFHYLVFDLVTGGELFEDIVAREFYSEADASHCIQQILESIAYCHSNGIVHRNLKP 133
Query: 140 QNILLT---KDNNIKLCDFGISRVVNDVVEVKEIIGTPDYVAPEVLSYEPISLATDMWSV 196
+N+LL K +KL DFG++ VND GTP Y++PEVL +P S D+W+
Sbjct: 134 ENLLLASKAKGAAVKLADFGLAIEVNDSEAWHGFAGTPGYLSPEVLKKDPYSKPVDIWAC 193
Query: 197 GVLAYVLLSSHSPFAGDNKQETFLNISQCNFSFHEDLFGHISSQAKDFIQSCLVTDP 253
GV+ Y+LL + PF +++ + I + + + ++ +AK I S L +P
Sbjct: 194 GVILYILLVGYPPFWDEDQHRLYAQIKAGAYDYPSPEWDTVTPEAKSLIDSMLTVNP 250
>pdb|3KK9|A Chain A, Camkii Substrate Complex B
Length = 282
Score = 142 bits (359), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 79/237 (33%), Positives = 126/237 (53%), Gaps = 4/237 (1%)
Query: 20 SRGKFASVRKCTHKITKVEYAAKFIRKRRRSMDQMQDILHEAAVLYLAQKSERIVGLHEI 79
+G F+ VR+C HK T +E+AAK I ++ S Q + EA + Q IV LH+
Sbjct: 14 GKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPN-IVRLHDS 72
Query: 80 YETPHEMVLVLEMVPDGELQRLVDIQDGIPEQDTRSYMKQILEALAFLHDHNITHLDLKP 139
+ LV ++V GEL + ++ E D ++QILE++A+ H + I H +LKP
Sbjct: 73 IQEESFHYLVFDLVTGGELFEDIVAREFYSEADASHCIQQILESIAYCHSNGIVHRNLKP 132
Query: 140 QNILLT---KDNNIKLCDFGISRVVNDVVEVKEIIGTPDYVAPEVLSYEPISLATDMWSV 196
+N+LL K +KL DFG++ VND GTP Y++PEVL +P S D+W+
Sbjct: 133 ENLLLASKAKGAAVKLADFGLAIEVNDSEAWHGFAGTPGYLSPEVLKKDPYSKPVDIWAC 192
Query: 197 GVLAYVLLSSHSPFAGDNKQETFLNISQCNFSFHEDLFGHISSQAKDFIQSCLVTDP 253
GV+ Y+LL + PF +++ + I + + + ++ +AK I S L +P
Sbjct: 193 GVILYILLVGYPPFWDEDQHRLYAQIKAGAYDYPSPEWDTVTPEAKSLIDSMLTVNP 249
>pdb|2WEI|A Chain A, Crystal Structure Of The Kinase Domain Of Cryptosporidium
Parvum Calcium Dependent Protein Kinase In Complex With
3- Mb-Pp1
Length = 287
Score = 142 bits (357), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 88/244 (36%), Positives = 122/244 (50%), Gaps = 9/244 (3%)
Query: 15 IFCMPSRGKFASVRKCTHKITKVEYAAKFIRKRRRSMDQMQDILHEAAVLYLAQKSERIV 74
I CM +G F V KC +IT+ EYA K I K IL E +L I+
Sbjct: 26 IVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPN-IM 84
Query: 75 GLHEIYETPHEMVLVLEMVPDGELQRLVDIQDGIPEQDTRSYMKQILEALAFLHDHNITH 134
L EI E +V E+ GEL + + E D +KQ+ + ++H HNI H
Sbjct: 85 KLFEILEDSSSFYIVGELYTGGELFDEIIKRKRFSEHDAARIIKQVFSGITYMHKHNIVH 144
Query: 135 LDLKPQNILL---TKDNNIKLCDFGISRVVNDVVEVKEIIGTPDYVAPEVL--SYEPISL 189
DLKP+NILL KD +IK+ DFG+S ++K+ IGT Y+APEVL +Y+
Sbjct: 145 RDLKPENILLESKEKDCDIKIIDFGLSTCFQQNTKMKDRIGTAYYIAPEVLRGTYDE--- 201
Query: 190 ATDMWSVGVLAYVLLSSHSPFAGDNKQETFLNISQCNFSFHEDLFGHISSQAKDFIQSCL 249
D+WS GV+ Y+LLS PF G N+ + + ++F + IS AKD I+ L
Sbjct: 202 KCDVWSAGVILYILLSGTPPFYGKNEYDILKRVETGKYAFDLPQWRTISDDAKDLIRKML 261
Query: 250 VTDP 253
P
Sbjct: 262 TFHP 265
>pdb|3DFA|A Chain A, Crystal Structure Of Kinase Domain Of Calcium-dependent
Protein Kinase Cgd3_920 From Cryptosporidium Parvum
Length = 286
Score = 142 bits (357), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 88/244 (36%), Positives = 122/244 (50%), Gaps = 9/244 (3%)
Query: 15 IFCMPSRGKFASVRKCTHKITKVEYAAKFIRKRRRSMDQMQDILHEAAVLYLAQKSERIV 74
I CM +G F V KC +IT+ EYA K I K IL E +L I+
Sbjct: 26 IVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPN-IM 84
Query: 75 GLHEIYETPHEMVLVLEMVPDGELQRLVDIQDGIPEQDTRSYMKQILEALAFLHDHNITH 134
L EI E +V E+ GEL + + E D +KQ+ + ++H HNI H
Sbjct: 85 KLFEILEDSSSFYIVGELYTGGELFDEIIKRKRFSEHDAARIIKQVFSGITYMHKHNIVH 144
Query: 135 LDLKPQNILL---TKDNNIKLCDFGISRVVNDVVEVKEIIGTPDYVAPEVL--SYEPISL 189
DLKP+NILL KD +IK+ DFG+S ++K+ IGT Y+APEVL +Y+
Sbjct: 145 RDLKPENILLESKEKDCDIKIIDFGLSTCFQQNTKMKDRIGTAYYIAPEVLRGTYDE--- 201
Query: 190 ATDMWSVGVLAYVLLSSHSPFAGDNKQETFLNISQCNFSFHEDLFGHISSQAKDFIQSCL 249
D+WS GV+ Y+LLS PF G N+ + + ++F + IS AKD I+ L
Sbjct: 202 KCDVWSAGVILYILLSGTPPFYGKNEYDILKRVETGKYAFDLPQWRTISDDAKDLIRKML 261
Query: 250 VTDP 253
P
Sbjct: 262 TFHP 265
>pdb|3IGO|A Chain A, Crystal Structure Of Cryptosporidium Parvum Cdpk1,
Cgd3_920
pdb|3MWU|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Rm-1-95
pdb|3NCG|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Nm-Pp1
Length = 486
Score = 142 bits (357), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 88/244 (36%), Positives = 122/244 (50%), Gaps = 9/244 (3%)
Query: 15 IFCMPSRGKFASVRKCTHKITKVEYAAKFIRKRRRSMDQMQDILHEAAVLYLAQKSERIV 74
I CM +G F V KC +IT+ EYA K I K IL E +L I+
Sbjct: 26 IVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHP-NIM 84
Query: 75 GLHEIYETPHEMVLVLEMVPDGELQRLVDIQDGIPEQDTRSYMKQILEALAFLHDHNITH 134
L EI E +V E+ GEL + + E D +KQ+ + ++H HNI H
Sbjct: 85 KLFEILEDSSSFYIVGELYTGGELFDEIIKRKRFSEHDAARIIKQVFSGITYMHKHNIVH 144
Query: 135 LDLKPQNILL---TKDNNIKLCDFGISRVVNDVVEVKEIIGTPDYVAPEVL--SYEPISL 189
DLKP+NILL KD +IK+ DFG+S ++K+ IGT Y+APEVL +Y+
Sbjct: 145 RDLKPENILLESKEKDCDIKIIDFGLSTCFQQNTKMKDRIGTAYYIAPEVLRGTYDE--- 201
Query: 190 ATDMWSVGVLAYVLLSSHSPFAGDNKQETFLNISQCNFSFHEDLFGHISSQAKDFIQSCL 249
D+WS GV+ Y+LLS PF G N+ + + ++F + IS AKD I+ L
Sbjct: 202 KCDVWSAGVILYILLSGTPPFYGKNEYDILKRVETGKYAFDLPQWRTISDDAKDLIRKML 261
Query: 250 VTDP 253
P
Sbjct: 262 TFHP 265
>pdb|3LIJ|A Chain A, Crystal Structure Of Full Length Cpcdpk3 (Cgd5_820) In
Complex With Ca2+ And Amppnp
Length = 494
Score = 140 bits (354), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 85/234 (36%), Positives = 124/234 (52%), Gaps = 5/234 (2%)
Query: 22 GKFASVRKCTHKITKVEYAAKFIRKRRRSMDQMQDILHEAAVLYLAQKSERIVGLHEIYE 81
G + V C K+T VE A K IRK S +L E AVL L I+ L++ +E
Sbjct: 48 GAYGEVLLCRDKVTHVERAIKIIRKTSVSTSSNSKLLEEVAVLKLLDHP-NIMKLYDFFE 106
Query: 82 TPHEMVLVLEMVPDGELQRLVDIQDGIPEQDTRSYMKQILEALAFLHDHNITHLDLKPQN 141
LV+E GEL + + E D +KQ+L + +LH HNI H DLKP+N
Sbjct: 107 DKRNYYLVMECYKGGELFDEIIHRMKFNEVDAAVIIKQVLSGVTYLHKHNIVHRDLKPEN 166
Query: 142 ILLT---KDNNIKLCDFGISRVVNDVVEVKEIIGTPDYVAPEVLSYEPISLATDMWSVGV 198
+LL KD IK+ DFG+S V + ++KE +GT Y+APEVL + D+WS+GV
Sbjct: 167 LLLESKEKDALIKIVDFGLSAVFENQKKMKERLGTAYYIAPEVLR-KKYDEKCDVWSIGV 225
Query: 199 LAYVLLSSHSPFAGDNKQETFLNISQCNFSFHEDLFGHISSQAKDFIQSCLVTD 252
+ ++LL+ + PF G QE + + ++F + ++S AKD I+ L D
Sbjct: 226 ILFILLAGYPPFGGQTDQEILRKVEKGKYTFDSPEWKNVSEGAKDLIKQMLQFD 279
>pdb|1A06|A Chain A, Calmodulin-Dependent Protein Kinase From Rat
Length = 332
Score = 139 bits (351), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 86/241 (35%), Positives = 134/241 (55%), Gaps = 17/241 (7%)
Query: 22 GKFASV----RKCTHKITKVE-YAAKFIRKRRRSMDQMQDILHEAAVLYLAQKSERIVGL 76
G F+ V K T K+ ++ A K + + SM+ +LH+ K IV L
Sbjct: 29 GAFSEVILAEDKRTQKLVAIKCIAKKALEGKEGSMENEIAVLHKI-------KHPNIVAL 81
Query: 77 HEIYETPHEMVLVLEMVPDGEL-QRLVDIQDGIPEQDTRSYMKQILEALAFLHDHNITHL 135
+IYE+ + L++++V GEL R+V+ + E+D + Q+L+A+ +LHD I H
Sbjct: 82 DDIYESGGHLYLIMQLVSGGELFDRIVE-KGFYTERDASRLIFQVLDAVKYLHDLGIVHR 140
Query: 136 DLKPQNIL---LTKDNNIKLCDFGISRVVNDVVEVKEIIGTPDYVAPEVLSYEPISLATD 192
DLKP+N+L L +D+ I + DFG+S++ + + GTP YVAPEVL+ +P S A D
Sbjct: 141 DLKPENLLYYSLDEDSKIMISDFGLSKMEDPGSVLSTACGTPGYVAPEVLAQKPYSKAVD 200
Query: 193 MWSVGVLAYVLLSSHSPFAGDNKQETFLNISQCNFSFHEDLFGHISSQAKDFIQSCLVTD 252
WS+GV+AY+LL + PF +N + F I + + F + IS AKDFI+ + D
Sbjct: 201 CWSIGVIAYILLCGYPPFYDENDAKLFEQILKAEYEFDSPYWDDISDSAKDFIRHLMEKD 260
Query: 253 P 253
P
Sbjct: 261 P 261
>pdb|4FG9|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FG9|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FGB|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I Apo Form
Length = 320
Score = 139 bits (349), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 86/241 (35%), Positives = 134/241 (55%), Gaps = 17/241 (7%)
Query: 22 GKFASV----RKCTHKITKVEYAAK-FIRKRRRSMDQMQDILHEAAVLYLAQKSERIVGL 76
G F+ V K T K+ ++ AK + + SM+ +LH+ K IV L
Sbjct: 29 GAFSEVILAEDKRTQKLVAIKCIAKEALEGKEGSMENEIAVLHKI-------KHPNIVAL 81
Query: 77 HEIYETPHEMVLVLEMVPDGEL-QRLVDIQDGIPEQDTRSYMKQILEALAFLHDHNITHL 135
+IYE+ + L++++V GEL R+V+ + E+D + Q+L+A+ +LHD I H
Sbjct: 82 DDIYESGGHLYLIMQLVSGGELFDRIVE-KGFYTERDASRLIFQVLDAVKYLHDLGIVHR 140
Query: 136 DLKPQNIL---LTKDNNIKLCDFGISRVVNDVVEVKEIIGTPDYVAPEVLSYEPISLATD 192
DLKP+N+L L +D+ I + DFG+S++ + + GTP YVAPEVL+ +P S A D
Sbjct: 141 DLKPENLLYYSLDEDSKIMISDFGLSKMEDPGSVLSTACGTPGYVAPEVLAQKPYSKAVD 200
Query: 193 MWSVGVLAYVLLSSHSPFAGDNKQETFLNISQCNFSFHEDLFGHISSQAKDFIQSCLVTD 252
WS+GV+AY+LL + PF +N + F I + + F + IS AKDFI+ + D
Sbjct: 201 CWSIGVIAYILLCGYPPFYDENDAKLFEQILKAEYEFDSPYWDDISDSAKDFIRHLMEKD 260
Query: 253 P 253
P
Sbjct: 261 P 261
>pdb|4FG7|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-293 In Complex With Atp
Length = 293
Score = 139 bits (349), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 86/241 (35%), Positives = 134/241 (55%), Gaps = 17/241 (7%)
Query: 22 GKFASV----RKCTHKITKVEYAAK-FIRKRRRSMDQMQDILHEAAVLYLAQKSERIVGL 76
G F+ V K T K+ ++ AK + + SM+ +LH+ K IV L
Sbjct: 29 GAFSEVILAEDKRTQKLVAIKCIAKEALEGKEGSMENEIAVLHKI-------KHPNIVAL 81
Query: 77 HEIYETPHEMVLVLEMVPDGEL-QRLVDIQDGIPEQDTRSYMKQILEALAFLHDHNITHL 135
+IYE+ + L++++V GEL R+V+ + E+D + Q+L+A+ +LHD I H
Sbjct: 82 DDIYESGGHLYLIMQLVSGGELFDRIVE-KGFYTERDASRLIFQVLDAVKYLHDLGIVHR 140
Query: 136 DLKPQNIL---LTKDNNIKLCDFGISRVVNDVVEVKEIIGTPDYVAPEVLSYEPISLATD 192
DLKP+N+L L +D+ I + DFG+S++ + + GTP YVAPEVL+ +P S A D
Sbjct: 141 DLKPENLLYYSLDEDSKIMISDFGLSKMEDPGSVLSTACGTPGYVAPEVLAQKPYSKAVD 200
Query: 193 MWSVGVLAYVLLSSHSPFAGDNKQETFLNISQCNFSFHEDLFGHISSQAKDFIQSCLVTD 252
WS+GV+AY+LL + PF +N + F I + + F + IS AKDFI+ + D
Sbjct: 201 CWSIGVIAYILLCGYPPFYDENDAKLFEQILKAEYEFDSPYWDDISDSAKDFIRHLMEKD 260
Query: 253 P 253
P
Sbjct: 261 P 261
>pdb|4FG8|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
pdb|4FG8|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
Length = 315
Score = 138 bits (348), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 86/241 (35%), Positives = 134/241 (55%), Gaps = 17/241 (7%)
Query: 22 GKFASV----RKCTHKITKVEYAAK-FIRKRRRSMDQMQDILHEAAVLYLAQKSERIVGL 76
G F+ V K T K+ ++ AK + + SM+ +LH+ K IV L
Sbjct: 29 GAFSEVILAEDKRTQKLVAIKCIAKEALEGKEGSMENEIAVLHKI-------KHPNIVAL 81
Query: 77 HEIYETPHEMVLVLEMVPDGEL-QRLVDIQDGIPEQDTRSYMKQILEALAFLHDHNITHL 135
+IYE+ + L++++V GEL R+V+ + E+D + Q+L+A+ +LHD I H
Sbjct: 82 DDIYESGGHLYLIMQLVSGGELFDRIVE-KGFYTERDASRLIFQVLDAVKYLHDLGIVHR 140
Query: 136 DLKPQNIL---LTKDNNIKLCDFGISRVVNDVVEVKEIIGTPDYVAPEVLSYEPISLATD 192
DLKP+N+L L +D+ I + DFG+S++ + + GTP YVAPEVL+ +P S A D
Sbjct: 141 DLKPENLLYYSLDEDSKIMISDFGLSKMEDPGSVLSTACGTPGYVAPEVLAQKPYSKAVD 200
Query: 193 MWSVGVLAYVLLSSHSPFAGDNKQETFLNISQCNFSFHEDLFGHISSQAKDFIQSCLVTD 252
WS+GV+AY+LL + PF +N + F I + + F + IS AKDFI+ + D
Sbjct: 201 CWSIGVIAYILLCGYPPFYDENDAKLFEQILKAEYEFDSPYWDDISDSAKDFIRHLMEKD 260
Query: 253 P 253
P
Sbjct: 261 P 261
>pdb|2JAM|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
pdb|2JAM|B Chain B, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
Length = 304
Score = 136 bits (343), Expect = 9e-33, Method: Compositional matrix adjust.
Identities = 89/246 (36%), Positives = 135/246 (54%), Gaps = 8/246 (3%)
Query: 12 QTLIFC-MPSRGKFASVRKCTHKITKVEYAAKFIRKRRRSMDQMQDILHEAAVLYLAQKS 70
+T IF + G F+ V ++T +A K I+K D + +E AVL K
Sbjct: 9 KTFIFMEVLGSGAFSEVFLVKQRLTGKLFALKCIKKSPAFRDS--SLENEIAVLK-KIKH 65
Query: 71 ERIVGLHEIYETPHEMVLVLEMVPDGELQRLVDIQDGIPEQDTRSYMKQILEALAFLHDH 130
E IV L +IYE+ LV+++V GEL + + E+D ++Q+L A+ +LH++
Sbjct: 66 ENIVTLEDIYESTTHYYLVMQLVSGGELFDRILERGVYTEKDASLVIQQVLSAVKYLHEN 125
Query: 131 NITHLDLKPQNIL-LTKDNN--IKLCDFGISRVVNDVVEVKEIIGTPDYVAPEVLSYEPI 187
I H DLKP+N+L LT + N I + DFG+S++ + + + GTP YVAPEVL+ +P
Sbjct: 126 GIVHRDLKPENLLYLTPEENSKIMITDFGLSKMEQNGI-MSTACGTPGYVAPEVLAQKPY 184
Query: 188 SLATDMWSVGVLAYVLLSSHSPFAGDNKQETFLNISQCNFSFHEDLFGHISSQAKDFIQS 247
S A D WS+GV+ Y+LL + PF + + + F I + + F + IS AKDFI
Sbjct: 185 SKAVDCWSIGVITYILLCGYPPFYEETESKLFEKIKEGYYEFESPFWDDISESAKDFICH 244
Query: 248 CLVTDP 253
L DP
Sbjct: 245 LLEKDP 250
>pdb|2PHK|A Chain A, The Crystal Structure Of A Phosphorylase Kinase Peptide
Substrate Complex: Kinase Substrate Recognition
Length = 277
Score = 133 bits (334), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 84/247 (34%), Positives = 123/247 (49%), Gaps = 13/247 (5%)
Query: 20 SRGKFASVRKCTHKITKVEYAAKFI---RKRRRSMDQMQDI----LHEAAVLYLAQKSER 72
RG + VR+C HK T EYA K I S +++Q++ L E +L
Sbjct: 13 GRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREATLKEVDILRKVSGHPN 72
Query: 73 IVGLHEIYETPHEMVLVLEMVPDGELQRLVDIQDGIPEQDTRSYMKQILEALAFLHDHNI 132
I+ L + YET LV +++ GEL + + + E++TR M+ +LE + LH NI
Sbjct: 73 IIQLKDTYETNTFFFLVFDLMKKGELFDYLTEKVTLSEKETRKIMRALLEVICALHKLNI 132
Query: 133 THLDLKPQNILLTKDNNIKLCDFGISRVVNDVVEVKEIIGTPDYVAPEVL------SYEP 186
H DLKP+NILL D NIKL DFG S ++ +++E+ GTP Y+APE++ ++
Sbjct: 133 VHRDLKPENILLDDDMNIKLTDFGFSCQLDPGEKLREVCGTPSYLAPEIIECSMNDNHPG 192
Query: 187 ISLATDMWSVGVLAYVLLSSHSPFAGDNKQETFLNISQCNFSFHEDLFGHISSQAKDFIQ 246
DMWS GV+ Y LL+ PF + I N+ F + S KD +
Sbjct: 193 YGKEVDMWSTGVIMYTLLAGSPPFWHRKQMLMLRMIMSGNYQFGSPEWDDYSDTVKDLVS 252
Query: 247 SCLVTDP 253
LV P
Sbjct: 253 RFLVVQP 259
>pdb|1PHK|A Chain A, Two Structures Of The Catalytic Domain Of Phosphorylase,
Kinase: An Active Protein Kinase Complexed With
Nucleotide, Substrate-Analogue And Product
Length = 298
Score = 132 bits (333), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 84/247 (34%), Positives = 123/247 (49%), Gaps = 13/247 (5%)
Query: 20 SRGKFASVRKCTHKITKVEYAAKFI---RKRRRSMDQMQDI----LHEAAVLYLAQKSER 72
RG + VR+C HK T EYA K I S +++Q++ L E +L
Sbjct: 26 GRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREATLKEVDILRKVSGHPN 85
Query: 73 IVGLHEIYETPHEMVLVLEMVPDGELQRLVDIQDGIPEQDTRSYMKQILEALAFLHDHNI 132
I+ L + YET LV +++ GEL + + + E++TR M+ +LE + LH NI
Sbjct: 86 IIQLKDTYETNTFFFLVFDLMKKGELFDYLTEKVTLSEKETRKIMRALLEVICALHKLNI 145
Query: 133 THLDLKPQNILLTKDNNIKLCDFGISRVVNDVVEVKEIIGTPDYVAPEVL------SYEP 186
H DLKP+NILL D NIKL DFG S ++ +++E+ GTP Y+APE++ ++
Sbjct: 146 VHRDLKPENILLDDDMNIKLTDFGFSCQLDPGEKLREVCGTPSYLAPEIIECSMNDNHPG 205
Query: 187 ISLATDMWSVGVLAYVLLSSHSPFAGDNKQETFLNISQCNFSFHEDLFGHISSQAKDFIQ 246
DMWS GV+ Y LL+ PF + I N+ F + S KD +
Sbjct: 206 YGKEVDMWSTGVIMYTLLAGSPPFWHRKQMLMLRMIMSGNYQFGSPEWDDYSDTVKDLVS 265
Query: 247 SCLVTDP 253
LV P
Sbjct: 266 RFLVVQP 272
>pdb|3DXN|A Chain A, Crystal Structure Of The Calcium-dependent Kinase From
Toxoplasma Gondii, 541.m00134, Kinase Domain
Length = 287
Score = 132 bits (331), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 82/236 (34%), Positives = 120/236 (50%), Gaps = 6/236 (2%)
Query: 22 GKFASVRKCTHKITKVEYAAKFIRKRR-RSMDQMQDILHEAAVLYLAQKSERIVGLHEIY 80
G + V C K+T E A K I+K + +L E AVL I+ L+E +
Sbjct: 32 GAYGEVLLCKDKLTGAERAIKIIKKSSVTTTSNSGALLDEVAVLKQLDHPN-IMKLYEFF 90
Query: 81 ETPHEMVLVLEMVPDGELQRLVDIQDGIPEQDTRSYMKQILEALAFLHDHNITHLDLKPQ 140
E LV+E+ GEL + ++ E D MKQ+L +LH HNI H DLKP+
Sbjct: 91 EDKRNYYLVMEVYRGGELFDEIILRQKFSEVDAAVIMKQVLSGTTYLHKHNIVHRDLKPE 150
Query: 141 NILL---TKDNNIKLCDFGISRVVNDVVEVKEIIGTPDYVAPEVLSYEPISLATDMWSVG 197
N+LL ++D IK+ DFG+S ++KE +GT Y+APEVL + D+WS G
Sbjct: 151 NLLLESKSRDALIKIVDFGLSAHFEVGGKMKERLGTAYYIAPEVLR-KKYDEKCDVWSCG 209
Query: 198 VLAYVLLSSHSPFAGDNKQETFLNISQCNFSFHEDLFGHISSQAKDFIQSCLVTDP 253
V+ Y+LL + PF G QE + + FSF + +S +AK ++ L +P
Sbjct: 210 VILYILLCGYPPFGGQTDQEILKRVEKGKFSFDPPDWTQVSDEAKQLVKLMLTYEP 265
>pdb|3KN5|A Chain A, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
In With Amp-Pnp
pdb|3KN5|B Chain B, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
In With Amp-Pnp
pdb|3KN6|A Chain A, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
pdb|3KN6|B Chain B, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
Length = 325
Score = 132 bits (331), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 79/245 (32%), Positives = 124/245 (50%), Gaps = 16/245 (6%)
Query: 20 SRGKFASVRKCTHKITKVEYAAKFIRKRRRSMDQMQDILHEAAVLYLAQKSERIVGLHEI 79
G F+ RKC HK + +A K I KR + Q E L L + IV LHE+
Sbjct: 20 GEGSFSICRKCVHKKSNQAFAVKIISKRMEANTQ-----KEITALKLCEGHPNIVKLHEV 74
Query: 80 YETPHEMVLVLEMVPDGELQRLVDIQDGIPEQDTRSYMKQILEALAFLHDHNITHLDLKP 139
+ LV+E++ GEL + + E + M++++ A++ +HD + H DLKP
Sbjct: 75 FHDQLHTFLVMELLNGGELFERIKKKKHFSETEASYIMRKLVSAVSHMHDVGVVHRDLKP 134
Query: 140 QNILLTKDNN---IKLCDFGISRVV-NDVVEVKEIIGTPDYVAPEVLSYEPISLATDMWS 195
+N+L T +N+ IK+ DFG +R+ D +K T Y APE+L+ + D+WS
Sbjct: 135 ENLLFTDENDNLEIKIIDFGFARLKPPDNQPLKTPCFTLHYAAPELLNQNGYDESCDLWS 194
Query: 196 VGVLAYVLLSSHSPFAGDNKQ-------ETFLNISQCNFSFHEDLFGHISSQAKDFIQSC 248
+GV+ Y +LS PF ++ E I + +FSF + + ++S +AKD IQ
Sbjct: 195 LGVILYTMLSGQVPFQSHDRSLTCTSAVEIMKKIKKGDFSFEGEAWKNVSQEAKDLIQGL 254
Query: 249 LVTDP 253
L DP
Sbjct: 255 LTVDP 259
>pdb|1QL6|A Chain A, The Catalytic Mechanism Of Phosphorylase Kinase Probed By
Mutational Studies
Length = 298
Score = 130 bits (328), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 83/247 (33%), Positives = 122/247 (49%), Gaps = 13/247 (5%)
Query: 20 SRGKFASVRKCTHKITKVEYAAKFI---RKRRRSMDQMQDI----LHEAAVLYLAQKSER 72
RG + VR+C HK T EYA K I S +++Q++ L E +L
Sbjct: 26 GRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREATLKEVDILRKVSGHPN 85
Query: 73 IVGLHEIYETPHEMVLVLEMVPDGELQRLVDIQDGIPEQDTRSYMKQILEALAFLHDHNI 132
I+ L + YET LV +++ GEL + + + E++TR M+ +LE + LH NI
Sbjct: 86 IIQLKDTYETNTFFFLVFDLMKKGELFDYLTEKVTLSEKETRKIMRALLEVICALHKLNI 145
Query: 133 THLDLKPQNILLTKDNNIKLCDFGISRVVNDVVEVKEIIGTPDYVAPEVL------SYEP 186
H DLKP+NILL D NIKL DFG S ++ +++ + GTP Y+APE++ ++
Sbjct: 146 VHRDLKPENILLDDDMNIKLTDFGFSCQLDPGEKLRSVCGTPSYLAPEIIECSMNDNHPG 205
Query: 187 ISLATDMWSVGVLAYVLLSSHSPFAGDNKQETFLNISQCNFSFHEDLFGHISSQAKDFIQ 246
DMWS GV+ Y LL+ PF + I N+ F + S KD +
Sbjct: 206 YGKEVDMWSTGVIMYTLLAGSPPFWHRKQMLMLRMIMSGNYQFGSPEWDDYSDTVKDLVS 265
Query: 247 SCLVTDP 253
LV P
Sbjct: 266 RFLVVQP 272
>pdb|2Y7J|A Chain A, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|B Chain B, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|C Chain C, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|D Chain D, Structure Of Human Phosphorylase Kinase, Gamma 2
Length = 365
Score = 130 bits (328), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 80/246 (32%), Positives = 128/246 (52%), Gaps = 12/246 (4%)
Query: 20 SRGKFASVRKCTHKITKVEYAAKF--IRKRRRSMDQMQDIL----HEAAVLYLAQKSERI 73
RG + VR+C H+ T E+A K + R S +Q++++ E +L I
Sbjct: 103 GRGVSSVVRRCVHRATGHEFAVKIMEVTAERLSPEQLEEVREATRRETHILRQVAGHPHI 162
Query: 74 VGLHEIYETPHEMVLVLEMVPDGELQRLVDIQDGIPEQDTRSYMKQILEALAFLHDHNIT 133
+ L + YE+ M LV +++ GEL + + + E++TRS M+ +LEA++FLH +NI
Sbjct: 163 ITLIDSYESSSFMFLVFDLMRKGELFDYLTEKVALSEKETRSIMRSLLEAVSFLHANNIV 222
Query: 134 HLDLKPQNILLTKDNNIKLCDFGISRVVNDVVEVKEIIGTPDYVAPEVL------SYEPI 187
H DLKP+NILL + I+L DFG S + +++E+ GTP Y+APE+L ++
Sbjct: 223 HRDLKPENILLDDNMQIRLSDFGFSCHLEPGEKLRELCGTPGYLAPEILKCSMDETHPGY 282
Query: 188 SLATDMWSVGVLAYVLLSSHSPFAGDNKQETFLNISQCNFSFHEDLFGHISSQAKDFIQS 247
D+W+ GV+ + LL+ PF + I + + F + SS KD I
Sbjct: 283 GKEVDLWACGVILFTLLAGSPPFWHRRQILMLRMIMEGQYQFSSPEWDDRSSTVKDLISR 342
Query: 248 CLVTDP 253
L DP
Sbjct: 343 LLQVDP 348
>pdb|3HZT|A Chain A, Crystal Structure Of Toxoplasma Gondii Cdpk3,
Tgme49_105860
Length = 467
Score = 130 bits (328), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 82/236 (34%), Positives = 120/236 (50%), Gaps = 6/236 (2%)
Query: 22 GKFASVRKCTHKITKVEYAAKFIRKRR-RSMDQMQDILHEAAVLYLAQKSERIVGLHEIY 80
G + V C K+T E A K I+K + +L E AVL I+ L+E +
Sbjct: 15 GAYGEVLLCKDKLTGAERAIKIIKKSSVTTTSNSGALLDEVAVLKQLDHP-NIMKLYEFF 73
Query: 81 ETPHEMVLVLEMVPDGELQRLVDIQDGIPEQDTRSYMKQILEALAFLHDHNITHLDLKPQ 140
E LV+E+ GEL + ++ E D MKQ+L +LH HNI H DLKP+
Sbjct: 74 EDKRNYYLVMEVYRGGELFDEIILRQKFSEVDAAVIMKQVLSGTTYLHKHNIVHRDLKPE 133
Query: 141 NILL---TKDNNIKLCDFGISRVVNDVVEVKEIIGTPDYVAPEVLSYEPISLATDMWSVG 197
N+LL ++D IK+ DFG+S ++KE +GT Y+APEVL + D+WS G
Sbjct: 134 NLLLESKSRDALIKIVDFGLSAHFEVGGKMKERLGTAYYIAPEVLR-KKYDEKCDVWSCG 192
Query: 198 VLAYVLLSSHSPFAGDNKQETFLNISQCNFSFHEDLFGHISSQAKDFIQSCLVTDP 253
V+ Y+LL + PF G QE + + FSF + +S +AK ++ L +P
Sbjct: 193 VILYILLCGYPPFGGQTDQEILKRVEKGKFSFDPPDWTQVSDEAKQLVKLMLTYEP 248
>pdb|2V7O|A Chain A, Crystal Structure Of Human Calcium-Calmodulin-Dependent
Protein Kinase Ii Gamma
Length = 336
Score = 129 bits (324), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 82/256 (32%), Positives = 128/256 (50%), Gaps = 9/256 (3%)
Query: 2 CNKFFVNGGYQTLIFCMPSRGKFASVRKCTHKITKVEYAAKFIRKRRRSMDQMQDILHEA 61
C +F YQ +F +G F+ VR+C K EYAAK I ++ S Q + EA
Sbjct: 26 CTRF--TDDYQ--LFEELGKGAFSVVRRCVKKTPTQEYAAKIINTKKLSARDHQKLEREA 81
Query: 62 AVLYLAQKSERIVGLHEIYETPHEMVLVLEMVPDGELQRLVDIQDGIPEQDTRSYMKQIL 121
+ L K IV LH+ LV ++V GEL + ++ E D + QIL
Sbjct: 82 RICRLL-KHPNIVRLHDSISEEGFHYLVFDLVTGGELFEDIVAREYYSEADASHCIHQIL 140
Query: 122 EALAFLHDHNITHLDLKPQNILLT---KDNNIKLCDFGIS-RVVNDVVEVKEIIGTPDYV 177
E++ +H H+I H DLKP+N+LL K +KL DFG++ V + GTP Y+
Sbjct: 141 ESVNHIHQHDIVHRDLKPENLLLASKCKGAAVKLADFGLAIEVQGEQQAWFGFAGTPGYL 200
Query: 178 APEVLSYEPISLATDMWSVGVLAYVLLSSHSPFAGDNKQETFLNISQCNFSFHEDLFGHI 237
+PEVL +P D+W+ GV+ Y+LL + PF +++ + + I + F + +
Sbjct: 201 SPEVLRKDPYGKPVDIWACGVILYILLVGYPPFWDEDQHKLYQQIKAGAYDFPSPEWDTV 260
Query: 238 SSQAKDFIQSCLVTDP 253
+ +AK+ I L +P
Sbjct: 261 TPEAKNLINQMLTINP 276
>pdb|2VN9|A Chain A, Crystal Structure Of Human Calcium Calmodulin Dependent
Protein Kinase Ii Delta Isoform 1, Camkd
pdb|2VN9|B Chain B, Crystal Structure Of Human Calcium Calmodulin Dependent
Protein Kinase Ii Delta Isoform 1, Camkd
Length = 301
Score = 127 bits (320), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 79/238 (33%), Positives = 120/238 (50%), Gaps = 5/238 (2%)
Query: 20 SRGKFASVRKCTHKITKVEYAAKFIRKRRRSMDQMQDILHEAAVLYLAQKSERIVGLHEI 79
+G F+ VR+C T EYAAK I ++ S Q + EA + L K IV LH+
Sbjct: 13 GKGAFSVVRRCMKIPTGQEYAAKIINTKKLSARDHQKLEREARICRLL-KHPNIVRLHDS 71
Query: 80 YETPHEMVLVLEMVPDGELQRLVDIQDGIPEQDTRSYMKQILEALAFLHDHNITHLDLKP 139
LV ++V GEL + ++ E D ++QILE++ H + I H DLKP
Sbjct: 72 ISEEGFHYLVFDLVTGGELFEDIVAREYYSEADASHCIQQILESVNHCHLNGIVHRDLKP 131
Query: 140 QNILL---TKDNNIKLCDFGIS-RVVNDVVEVKEIIGTPDYVAPEVLSYEPISLATDMWS 195
+N+LL +K +KL DFG++ V D GTP Y++PEVL +P DMW+
Sbjct: 132 ENLLLASKSKGAAVKLADFGLAIEVQGDQQAWFGFAGTPGYLSPEVLRKDPYGKPVDMWA 191
Query: 196 VGVLAYVLLSSHSPFAGDNKQETFLNISQCNFSFHEDLFGHISSQAKDFIQSCLVTDP 253
GV+ Y+LL + PF +++ + I + F + ++ +AKD I L +P
Sbjct: 192 CGVILYILLVGYPPFWDEDQHRLYQQIKAGAYDFPSPEWDTVTPEAKDLINKMLTINP 249
>pdb|3MFR|A Chain A, Cask-4m Cam Kinase Domain, Native
pdb|3MFS|A Chain A, Cask-4m Cam Kinase Domain, Amppnp
pdb|3MFT|A Chain A, Cask-4m Cam Kinase Domain, Mn2+
pdb|3MFU|A Chain A, Cask-4m Cam Kinase Domain, Amppnp-Mn2+
Length = 351
Score = 127 bits (320), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 80/246 (32%), Positives = 130/246 (52%), Gaps = 15/246 (6%)
Query: 20 SRGKFASVRKCTHKITKVEYAAKFIRKRRRSMD---QMQDILHEAAVLYLAQKSERIVGL 76
+G F+ VR+C ++ T ++A K + + + +D+ EA++ ++ K IV L
Sbjct: 33 GKGAFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLSTEDLKREASICHML-KHPHIVEL 91
Query: 77 HEIYETPHEMVLVLEMVPDG-----ELQRLVDIQDGIPEQDTRSYMKQILEALAFLHDHN 131
E Y + + +V E + DG E+ + D E YM+QILEAL + HD+N
Sbjct: 92 LETYSSDGMLYMVFEFM-DGADLCFEIVKRADAGFVYSEAVASHYMRQILEALRYCHDNN 150
Query: 132 ITHLDLKPQNILLTKDNN---IKLCDFGIS-RVVNDVVEVKEIIGTPDYVAPEVLSYEPI 187
I H D+KP+N+LL N +KL DFG++ ++ + +GTP ++APEV+ EP
Sbjct: 151 IIHRDVKPENVLLASKENSAPVKLGDFGVAIQLGESGLVAGGRVGTPHFMAPEVVKREPY 210
Query: 188 SLATDMWSVGVLAYVLLSSHSPFAGDNKQETFLNISQCNFSFHEDLFGHISSQAKDFIQS 247
D+W GV+ ++LLS PF G K+ F I + + + + HIS AKD ++
Sbjct: 211 GKPVDVWGCGVILFILLSGCLPFYG-TKERLFEGIIKGKYKMNPRQWSHISESAKDLVRR 269
Query: 248 CLVTDP 253
L+ DP
Sbjct: 270 MLMLDP 275
>pdb|2WEL|A Chain A, Crystal Structure Of Su6656-Bound CalciumCALMODULIN-
Dependent Protein Kinase Ii Delta In Complex With
Calmodulin
Length = 327
Score = 127 bits (319), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 79/238 (33%), Positives = 120/238 (50%), Gaps = 5/238 (2%)
Query: 20 SRGKFASVRKCTHKITKVEYAAKFIRKRRRSMDQMQDILHEAAVLYLAQKSERIVGLHEI 79
+G F+ VR+C T EYAAK I ++ S Q + EA + L K IV LH+
Sbjct: 13 GKGAFSVVRRCMKIPTGQEYAAKIINTKKLSARDHQKLEREARICRLL-KHPNIVRLHDS 71
Query: 80 YETPHEMVLVLEMVPDGELQRLVDIQDGIPEQDTRSYMKQILEALAFLHDHNITHLDLKP 139
LV ++V GEL + ++ E D ++QILE++ H + I H DLKP
Sbjct: 72 ISEEGFHYLVFDLVTGGELFEDIVAREYYSEADASHCIQQILESVNHCHLNGIVHRDLKP 131
Query: 140 QNILL---TKDNNIKLCDFGIS-RVVNDVVEVKEIIGTPDYVAPEVLSYEPISLATDMWS 195
+N+LL +K +KL DFG++ V D GTP Y++PEVL +P DMW+
Sbjct: 132 ENLLLASKSKGAAVKLADFGLAIEVQGDQQAWFGFAGTPGYLSPEVLRKDPYGKPVDMWA 191
Query: 196 VGVLAYVLLSSHSPFAGDNKQETFLNISQCNFSFHEDLFGHISSQAKDFIQSCLVTDP 253
GV+ Y+LL + PF +++ + I + F + ++ +AKD I L +P
Sbjct: 192 CGVILYILLVGYPPFWDEDQHRLYQQIKAGAYDFPSPEWDTVTPEAKDLINKMLTINP 249
>pdb|2VZ6|A Chain A, Structure Of Human Calcium Calmodulin Dependent Protein
Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin
E804
pdb|2VZ6|B Chain B, Structure Of Human Calcium Calmodulin Dependent Protein
Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin
E804
Length = 313
Score = 126 bits (316), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 75/238 (31%), Positives = 118/238 (49%), Gaps = 5/238 (2%)
Query: 20 SRGKFASVRKCTHKITKVEYAAKFIRKRRRSMDQMQDILHEAAVLYLAQKSERIVGLHEI 79
+G F+ VR+C + EYAAK I ++ S Q + EA + L K IV LH+
Sbjct: 31 GKGAFSVVRRCVKVLAGQEYAAKIINTKKLSARDHQKLEREARICRLL-KHPNIVRLHDS 89
Query: 80 YETPHEMVLVLEMVPDGELQRLVDIQDGIPEQDTRSYMKQILEALAFLHDHNITHLDLKP 139
L+ ++V GEL + ++ E D ++QILEA+ H + H DLKP
Sbjct: 90 ISEEGHHYLIFDLVTGGELFEDIVAREYYSEADASHCIQQILEAVLHCHQMGVVHRDLKP 149
Query: 140 QNILLT---KDNNIKLCDFGIS-RVVNDVVEVKEIIGTPDYVAPEVLSYEPISLATDMWS 195
+N+LL K +KL DFG++ V + GTP Y++PEVL +P D+W+
Sbjct: 150 ENLLLASKLKGAAVKLADFGLAIEVEGEQQAWFGFAGTPGYLSPEVLRKDPYGKPVDLWA 209
Query: 196 VGVLAYVLLSSHSPFAGDNKQETFLNISQCNFSFHEDLFGHISSQAKDFIQSCLVTDP 253
GV+ Y+LL + PF +++ + I + F + ++ +AKD I L +P
Sbjct: 210 CGVILYILLVGYPPFWDEDQHRLYQQIKAGAYDFPSPEWDTVTPEAKDLINKMLTINP 267
>pdb|3Q5I|A Chain A, Crystal Structure Of Pbanka_031420
Length = 504
Score = 126 bits (316), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 76/244 (31%), Positives = 124/244 (50%), Gaps = 14/244 (5%)
Query: 22 GKFASVRKCTHKITKVEYAAKFIRKRR----------RSMDQMQDILHEAAVLYLAQKSE 71
G + V C K E A K I+K + +++++ + ++ L +
Sbjct: 47 GAYGEVLLCKEKNGHSEKAIKVIKKSQFDKGRYSDDNKNIEKFHEEIYNEISLLKSLDHP 106
Query: 72 RIVGLHEIYETPHEMVLVLEMVPDGELQRLVDIQDGIPEQDTRSYMKQILEALAFLHDHN 131
I+ L +++E LV E GEL + + E D + MKQIL + +LH HN
Sbjct: 107 NIIKLFDVFEDKKYFYLVTEFYEGGELFEQIINRHKFDECDAANIMKQILSGICYLHKHN 166
Query: 132 ITHLDLKPQNILLTKDN---NIKLCDFGISRVVNDVVEVKEIIGTPDYVAPEVLSYEPIS 188
I H D+KP+NILL N NIK+ DFG+S + ++++ +GT Y+APEVL + +
Sbjct: 167 IVHRDIKPENILLENKNSLLNIKIVDFGLSSFFSKDYKLRDRLGTAYYIAPEVLK-KKYN 225
Query: 189 LATDMWSVGVLAYVLLSSHSPFAGDNKQETFLNISQCNFSFHEDLFGHISSQAKDFIQSC 248
D+WS GV+ Y+LL + PF G N Q+ + + + F + + +IS +AK+ I+
Sbjct: 226 EKCDVWSCGVIMYILLCGYPPFGGQNDQDIIKKVEKGKYYFDFNDWKNISDEAKELIKLM 285
Query: 249 LVTD 252
L D
Sbjct: 286 LTYD 289
>pdb|3MA6|A Chain A, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
pdb|3MA6|B Chain B, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
Length = 298
Score = 124 bits (312), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 78/237 (32%), Positives = 118/237 (49%), Gaps = 4/237 (1%)
Query: 20 SRGKFASVRKCTHKITKVEYAAKFIRKRRRSMDQMQDILHEAAVLYLAQKSERIVGLHEI 79
+G F V C KIT E A K I KR+ ++ L L I+ L+E
Sbjct: 41 GKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLDHPNIMKLYEF 100
Query: 80 YETPHEMVLVLEMVPDGELQRLVDIQDGIPEQDTRSYMKQILEALAFLHDHNITHLDLKP 139
+E LV E+ GEL + + E D ++Q+L + ++H + I H DLKP
Sbjct: 101 FEDKGYFYLVGEVYTGGELFDEIISRKRFSEVDAARIIRQVLSGITYMHKNKIVHRDLKP 160
Query: 140 QNILL---TKDNNIKLCDFGISRVVNDVVEVKEIIGTPDYVAPEVLSYEPISLATDMWSV 196
+N+LL +KD NI++ DFG+S ++K+ IGT Y+APEVL + D+WS
Sbjct: 161 ENLLLESKSKDANIRIIDFGLSTHFEASKKMKDKIGTAYYIAPEVL-HGTYDEKCDVWST 219
Query: 197 GVLAYVLLSSHSPFAGDNKQETFLNISQCNFSFHEDLFGHISSQAKDFIQSCLVTDP 253
GV+ Y+LLS PF G N+ + + + ++F + +S AKD I+ L P
Sbjct: 220 GVILYILLSGCPPFNGANEYDILKKVEKGKYTFELPQWKKVSESAKDLIRKMLTYVP 276
>pdb|3BHH|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|C Chain C, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|D Chain D, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
Length = 295
Score = 124 bits (312), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 77/238 (32%), Positives = 119/238 (50%), Gaps = 5/238 (2%)
Query: 20 SRGKFASVRKCTHKITKVEYAAKFIRKRRRSMDQMQDILHEAAVLYLAQKSERIVGLHEI 79
+G F+ VR+C T EYAAK I ++ S Q + EA + L + S IV LH+
Sbjct: 13 GKGAFSVVRRCVKLCTGHEYAAKIINTKKLSARDHQKLEREARICRLLKHSN-IVRLHDS 71
Query: 80 YETPHEMVLVLEMVPDGELQRLVDIQDGIPEQDTRSYMKQILEALAFLHDHNITHLDLKP 139
LV ++V GEL + ++ E D ++QILEA+ H + H DLKP
Sbjct: 72 ISEEGFHYLVFDLVTGGELFEDIVAREYYSEADASHCIQQILEAVLHCHQMGVVHRDLKP 131
Query: 140 QNILLT---KDNNIKLCDFGIS-RVVNDVVEVKEIIGTPDYVAPEVLSYEPISLATDMWS 195
+N+LL K +KL DFG++ V D GTP Y++PEVL E D+W+
Sbjct: 132 ENLLLASKCKGAAVKLADFGLAIEVQGDQQAWFGFAGTPGYLSPEVLRKEAYGKPVDIWA 191
Query: 196 VGVLAYVLLSSHSPFAGDNKQETFLNISQCNFSFHEDLFGHISSQAKDFIQSCLVTDP 253
GV+ Y+LL + PF +++ + + I + F + ++ +AK+ I L +P
Sbjct: 192 CGVILYILLVGYPPFWDEDQHKLYQQIKAGAYDFPSPEWDTVTPEAKNLINQMLTINP 249
>pdb|3I79|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1)
pdb|3I7B|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Nm-Pp1
pdb|3N51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor
Rm-1-95
pdb|3SX9|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-132
pdb|3SXF|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-89
pdb|3T3U|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-130
pdb|3T3V|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-87
pdb|3UPX|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1300
pdb|3UPZ|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumpless Bki Analog Uw1243
pdb|3V51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Rm-1-176
pdb|3V5P|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1288
pdb|3V5T|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1299
Length = 484
Score = 124 bits (310), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 78/237 (32%), Positives = 118/237 (49%), Gaps = 4/237 (1%)
Query: 20 SRGKFASVRKCTHKITKVEYAAKFIRKRRRSMDQMQDILHEAAVLYLAQKSERIVGLHEI 79
+G F V C KIT E A K I KR+ ++ L L I+ L+E
Sbjct: 35 GKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLDHPNIMKLYEF 94
Query: 80 YETPHEMVLVLEMVPDGELQRLVDIQDGIPEQDTRSYMKQILEALAFLHDHNITHLDLKP 139
+E LV E+ GEL + + E D ++Q+L + ++H + I H DLKP
Sbjct: 95 FEDKGYFYLVGEVYTGGELFDEIISRKRFSEVDAARIIRQVLSGITYMHKNKIVHRDLKP 154
Query: 140 QNILL---TKDNNIKLCDFGISRVVNDVVEVKEIIGTPDYVAPEVLSYEPISLATDMWSV 196
+N+LL +KD NI++ DFG+S ++K+ IGT Y+APEVL + D+WS
Sbjct: 155 ENLLLESKSKDANIRIIDFGLSTHFEASKKMKDKIGTAYYIAPEVL-HGTYDEKCDVWST 213
Query: 197 GVLAYVLLSSHSPFAGDNKQETFLNISQCNFSFHEDLFGHISSQAKDFIQSCLVTDP 253
GV+ Y+LLS PF G N+ + + + ++F + +S AKD I+ L P
Sbjct: 214 GVILYILLSGCPPFNGANEYDILKKVEKGKYTFELPQWKKVSESAKDLIRKMLTYVP 270
>pdb|3HX4|A Chain A, Crystal Structure Of Cdpk1 Of Toxoplasma Gondii,
Tgme49_101440, In Presence Of Calcium
Length = 508
Score = 123 bits (309), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 78/237 (32%), Positives = 118/237 (49%), Gaps = 4/237 (1%)
Query: 20 SRGKFASVRKCTHKITKVEYAAKFIRKRRRSMDQMQDILHEAAVLYLAQKSERIVGLHEI 79
+G F V C KIT E A K I KR+ ++ L L I+ L+E
Sbjct: 59 GKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLDHPNIMKLYEF 118
Query: 80 YETPHEMVLVLEMVPDGELQRLVDIQDGIPEQDTRSYMKQILEALAFLHDHNITHLDLKP 139
+E LV E+ GEL + + E D ++Q+L + ++H + I H DLKP
Sbjct: 119 FEDKGYFYLVGEVYTGGELFDEIISRKRFSEVDAARIIRQVLSGITYMHKNKIVHRDLKP 178
Query: 140 QNILL---TKDNNIKLCDFGISRVVNDVVEVKEIIGTPDYVAPEVLSYEPISLATDMWSV 196
+N+LL +KD NI++ DFG+S ++K+ IGT Y+APEVL + D+WS
Sbjct: 179 ENLLLESKSKDANIRIIDFGLSTHFEASKKMKDKIGTAYYIAPEVL-HGTYDEKCDVWST 237
Query: 197 GVLAYVLLSSHSPFAGDNKQETFLNISQCNFSFHEDLFGHISSQAKDFIQSCLVTDP 253
GV+ Y+LLS PF G N+ + + + ++F + +S AKD I+ L P
Sbjct: 238 GVILYILLSGCPPFNGANEYDILKKVEKGKYTFELPQWKKVSESAKDLIRKMLTYVP 294
>pdb|3KU2|A Chain A, Crystal Structure Of Inactivated Form Of Cdpk1 From
Toxoplasma Gondii, Tgme49.101440
Length = 507
Score = 123 bits (309), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 78/237 (32%), Positives = 118/237 (49%), Gaps = 4/237 (1%)
Query: 20 SRGKFASVRKCTHKITKVEYAAKFIRKRRRSMDQMQDILHEAAVLYLAQKSERIVGLHEI 79
+G F V C KIT E A K I KR+ ++ L L I+ L+E
Sbjct: 58 GKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLDHPNIMKLYEF 117
Query: 80 YETPHEMVLVLEMVPDGELQRLVDIQDGIPEQDTRSYMKQILEALAFLHDHNITHLDLKP 139
+E LV E+ GEL + + E D ++Q+L + ++H + I H DLKP
Sbjct: 118 FEDKGYFYLVGEVYTGGELFDEIISRKRFSEVDAARIIRQVLSGITYMHKNKIVHRDLKP 177
Query: 140 QNILL---TKDNNIKLCDFGISRVVNDVVEVKEIIGTPDYVAPEVLSYEPISLATDMWSV 196
+N+LL +KD NI++ DFG+S ++K+ IGT Y+APEVL + D+WS
Sbjct: 178 ENLLLESKSKDANIRIIDFGLSTHFEASKKMKDKIGTAYYIAPEVL-HGTYDEKCDVWST 236
Query: 197 GVLAYVLLSSHSPFAGDNKQETFLNISQCNFSFHEDLFGHISSQAKDFIQSCLVTDP 253
GV+ Y+LLS PF G N+ + + + ++F + +S AKD I+ L P
Sbjct: 237 GVILYILLSGCPPFNGANEYDILKKVEKGKYTFELPQWKKVSESAKDLIRKMLTYVP 293
>pdb|3SOA|A Chain A, Full-Length Human Camkii
Length = 444
Score = 122 bits (305), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 73/238 (30%), Positives = 117/238 (49%), Gaps = 5/238 (2%)
Query: 20 SRGKFASVRKCTHKITKVEYAAKFIRKRRRSMDQMQDILHEAAVLYLAQKSERIVGLHEI 79
+G F+ VR+C + EYAA I ++ S Q + EA + L K IV LH+
Sbjct: 20 GKGAFSVVRRCVKVLAGQEYAAMIINTKKLSARDHQKLEREARICRLL-KHPNIVRLHDS 78
Query: 80 YETPHEMVLVLEMVPDGELQRLVDIQDGIPEQDTRSYMKQILEALAFLHDHNITHLDLKP 139
L+ ++V GEL + ++ E D ++QILEA+ H + H +LKP
Sbjct: 79 ISEEGHHYLIFDLVTGGELFEDIVAREYYSEADASHCIQQILEAVLHCHQMGVVHRNLKP 138
Query: 140 QNILLT---KDNNIKLCDFGIS-RVVNDVVEVKEIIGTPDYVAPEVLSYEPISLATDMWS 195
+N+LL K +KL DFG++ V + GTP Y++PEVL +P D+W+
Sbjct: 139 ENLLLASKLKGAAVKLADFGLAIEVEGEQQAWFGFAGTPGYLSPEVLRKDPYGKPVDLWA 198
Query: 196 VGVLAYVLLSSHSPFAGDNKQETFLNISQCNFSFHEDLFGHISSQAKDFIQSCLVTDP 253
GV+ Y+LL + PF +++ + I + F + ++ +AKD I L +P
Sbjct: 199 CGVILYILLVGYPPFWDEDQHRLYQQIKAGAYDFPSPEWDTVTPEAKDLINKMLTINP 256
>pdb|3TAC|A Chain A, Crystal Structure Of The Liprin-AlphaCASK COMPLEX
Length = 361
Score = 121 bits (304), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 78/246 (31%), Positives = 127/246 (51%), Gaps = 15/246 (6%)
Query: 20 SRGKFASVRKCTHKITKVEYAAKFIRKRRRSMD---QMQDILHEAAVLYLAQKSERIVGL 76
+G F+ VR+C ++ T ++A K + + + +D+ EA++ ++ K IV L
Sbjct: 35 GKGPFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLSTEDLKREASICHML-KHPHIVEL 93
Query: 77 HEIYETPHEMVLVLEMVPDG-----ELQRLVDIQDGIPEQDTRSYMKQILEALAFLHDHN 131
E Y + + +V E + DG E+ + D E YM+QILEAL + HD+N
Sbjct: 94 LETYSSDGMLYMVFEFM-DGADLCFEIVKRADAGFVYSEAVASHYMRQILEALRYCHDNN 152
Query: 132 ITHLDLKPQNILLTKDNN---IKLCDFGIS-RVVNDVVEVKEIIGTPDYVAPEVLSYEPI 187
I H D+KP +LL N +KL FG++ ++ + +GTP ++APEV+ EP
Sbjct: 153 IIHRDVKPHCVLLASKENSAPVKLGGFGVAIQLGESGLVAGGRVGTPHFMAPEVVKREPY 212
Query: 188 SLATDMWSVGVLAYVLLSSHSPFAGDNKQETFLNISQCNFSFHEDLFGHISSQAKDFIQS 247
D+W GV+ ++LLS PF G K+ F I + + + + HIS AKD ++
Sbjct: 213 GKPVDVWGCGVILFILLSGCLPFYG-TKERLFEGIIKGKYKMNPRQWSHISESAKDLVRR 271
Query: 248 CLVTDP 253
L+ DP
Sbjct: 272 MLMLDP 277
>pdb|3C0G|A Chain A, Cask Cam-kinase Domain- 3'-amp Complex, P1 Form
pdb|3C0G|B Chain B, Cask Cam-kinase Domain- 3'-amp Complex, P1 Form
pdb|3C0H|A Chain A, Cask Cam-Kinase Domain- Amppnp Complex, P1 Form
pdb|3C0H|B Chain B, Cask Cam-Kinase Domain- Amppnp Complex, P1 Form
pdb|3C0I|A Chain A, Cask Cam-Kinase Domain- 3'-Amp Complex, P212121 Form
Length = 351
Score = 121 bits (303), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 78/246 (31%), Positives = 127/246 (51%), Gaps = 15/246 (6%)
Query: 20 SRGKFASVRKCTHKITKVEYAAKFIRKRRRSMD---QMQDILHEAAVLYLAQKSERIVGL 76
+G F+ VR+C ++ T ++A K + + + +D+ EA++ ++ K IV L
Sbjct: 33 GKGPFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLSTEDLKREASICHML-KHPHIVEL 91
Query: 77 HEIYETPHEMVLVLEMVPDG-----ELQRLVDIQDGIPEQDTRSYMKQILEALAFLHDHN 131
E Y + + +V E + DG E+ + D E YM+QILEAL + HD+N
Sbjct: 92 LETYSSDGMLYMVFEFM-DGADLCFEIVKRADAGFVYSEAVASHYMRQILEALRYCHDNN 150
Query: 132 ITHLDLKPQNILLTKDNN---IKLCDFGIS-RVVNDVVEVKEIIGTPDYVAPEVLSYEPI 187
I H D+KP +LL N +KL FG++ ++ + +GTP ++APEV+ EP
Sbjct: 151 IIHRDVKPHCVLLASKENSAPVKLGGFGVAIQLGESGLVAGGRVGTPHFMAPEVVKREPY 210
Query: 188 SLATDMWSVGVLAYVLLSSHSPFAGDNKQETFLNISQCNFSFHEDLFGHISSQAKDFIQS 247
D+W GV+ ++LLS PF G K+ F I + + + + HIS AKD ++
Sbjct: 211 GKPVDVWGCGVILFILLSGCLPFYG-TKERLFEGIIKGKYKMNPRQWSHISESAKDLVRR 269
Query: 248 CLVTDP 253
L+ DP
Sbjct: 270 MLMLDP 275
>pdb|3I7C|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Na-Pp2
pdb|3NYV|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Non-Specific Inhibitor
Whi-P180
Length = 484
Score = 120 bits (302), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 78/237 (32%), Positives = 115/237 (48%), Gaps = 4/237 (1%)
Query: 20 SRGKFASVRKCTHKITKVEYAAKFIRKRRRSMDQMQDILHEAAVLYLAQKSERIVGLHEI 79
+G F V C KIT E A K I KR+ ++ L L I L+E
Sbjct: 35 GKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLDHPNIXKLYEF 94
Query: 80 YETPHEMVLVLEMVPDGELQRLVDIQDGIPEQDTRSYMKQILEALAFLHDHNITHLDLKP 139
+E LV E+ GEL + + E D ++Q+L + + H + I H DLKP
Sbjct: 95 FEDKGYFYLVGEVYTGGELFDEIISRKRFSEVDAARIIRQVLSGITYXHKNKIVHRDLKP 154
Query: 140 QNILL---TKDNNIKLCDFGISRVVNDVVEVKEIIGTPDYVAPEVLSYEPISLATDMWSV 196
+N+LL +KD NI++ DFG+S + K+ IGT Y+APEVL + D+WS
Sbjct: 155 ENLLLESKSKDANIRIIDFGLSTHFEASKKXKDKIGTAYYIAPEVL-HGTYDEKCDVWST 213
Query: 197 GVLAYVLLSSHSPFAGDNKQETFLNISQCNFSFHEDLFGHISSQAKDFIQSCLVTDP 253
GV+ Y+LLS PF G N+ + + + ++F + +S AKD I+ L P
Sbjct: 214 GVILYILLSGCPPFNGANEYDILKKVEKGKYTFELPQWKKVSESAKDLIRKXLTYVP 270
>pdb|3HYH|A Chain A, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
pdb|3HYH|B Chain B, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
Length = 275
Score = 120 bits (302), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 76/246 (30%), Positives = 127/246 (51%), Gaps = 8/246 (3%)
Query: 9 GGYQTLIFCMPSRGKFASVRKCTHKITKVEYAAKFIRKRRRSMDQMQDILHEAAVLYLAQ 68
G YQ I G F V+ H T + A K I K+ + MQ +
Sbjct: 13 GNYQ--IVKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLL 70
Query: 69 KSERIVGLHEIYETPHEMVLVLEMVPDGELQRLVDIQDGIPEQDTRSYMKQILEALAFLH 128
+ I+ L+++ ++ E+++V+E + EL + +D + EQ+ R + +QI+ A+ + H
Sbjct: 71 RHPHIIKLYDVIKSKDEIIMVIEYAGN-ELFDYIVQRDKMSEQEARRFFQQIISAVEYCH 129
Query: 129 DHNITHLDLKPQNILLTKDNNIKLCDFGISRVVNDVVEVKEIIGTPDYVAPEVLSYEPIS 188
H I H DLKP+N+LL + N+K+ DFG+S ++ D +K G+P+Y APEV+S + +
Sbjct: 130 RHKIVHRDLKPENLLLDEHLNVKIADFGLSNIMTDGNFLKTSCGSPNYAAPEVISGKLYA 189
Query: 189 LA-TDMWSVGVLAYVLLSSHSPFAGDNKQETFLNISQCNFSFHEDLFGHISSQAKDFIQS 247
D+WS GV+ YV+L PF ++ F NIS ++ + L S A I+
Sbjct: 190 GPEVDVWSCGVILYVMLCRRLPFDDESIPVLFKNISNGVYTLPKFL----SPGAAGLIKR 245
Query: 248 CLVTDP 253
L+ +P
Sbjct: 246 MLIVNP 251
>pdb|2FH9|A Chain A, Structure And Dimerization Of The Kinase Domain From Yeast
Snf1
Length = 274
Score = 120 bits (301), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 76/246 (30%), Positives = 127/246 (51%), Gaps = 8/246 (3%)
Query: 9 GGYQTLIFCMPSRGKFASVRKCTHKITKVEYAAKFIRKRRRSMDQMQDILHEAAVLYLAQ 68
G YQ I G F V+ H T + A K I K+ + MQ +
Sbjct: 8 GNYQ--IVKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLL 65
Query: 69 KSERIVGLHEIYETPHEMVLVLEMVPDGELQRLVDIQDGIPEQDTRSYMKQILEALAFLH 128
+ I+ L+++ ++ E+++V+E + EL + +D + EQ+ R + +QI+ A+ + H
Sbjct: 66 RHPHIIKLYDVIKSKDEIIMVIEYAGN-ELFDYIVQRDKMSEQEARRFFQQIISAVEYCH 124
Query: 129 DHNITHLDLKPQNILLTKDNNIKLCDFGISRVVNDVVEVKEIIGTPDYVAPEVLSYEPIS 188
H I H DLKP+N+LL + N+K+ DFG+S ++ D +K G+P+Y APEV+S + +
Sbjct: 125 RHKIVHRDLKPENLLLDEHLNVKIADFGLSNIMTDGNFLKTSCGSPNYAAPEVISGKLYA 184
Query: 189 LA-TDMWSVGVLAYVLLSSHSPFAGDNKQETFLNISQCNFSFHEDLFGHISSQAKDFIQS 247
D+WS GV+ YV+L PF ++ F NIS ++ + L S A I+
Sbjct: 185 GPEVDVWSCGVILYVMLCRRLPFDDESIPVLFKNISNGVYTLPKFL----SPGAAGLIKR 240
Query: 248 CLVTDP 253
L+ +P
Sbjct: 241 MLIVNP 246
>pdb|3DAE|A Chain A, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
pdb|3DAE|B Chain B, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
Length = 283
Score = 120 bits (301), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 76/246 (30%), Positives = 127/246 (51%), Gaps = 8/246 (3%)
Query: 9 GGYQTLIFCMPSRGKFASVRKCTHKITKVEYAAKFIRKRRRSMDQMQDILHEAAVLYLAQ 68
G YQ I G F V+ H T + A K I K+ + MQ +
Sbjct: 14 GNYQ--IVKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLL 71
Query: 69 KSERIVGLHEIYETPHEMVLVLEMVPDGELQRLVDIQDGIPEQDTRSYMKQILEALAFLH 128
+ I+ L+++ ++ E+++V+E + EL + +D + EQ+ R + +QI+ A+ + H
Sbjct: 72 RHPHIIKLYDVIKSKDEIIMVIEYAGN-ELFDYIVQRDKMSEQEARRFFQQIISAVEYCH 130
Query: 129 DHNITHLDLKPQNILLTKDNNIKLCDFGISRVVNDVVEVKEIIGTPDYVAPEVLSYEPIS 188
H I H DLKP+N+LL + N+K+ DFG+S ++ D +K G+P+Y APEV+S + +
Sbjct: 131 RHKIVHRDLKPENLLLDEHLNVKIADFGLSNIMTDGNFLKTSCGSPNYAAPEVISGKLYA 190
Query: 189 LA-TDMWSVGVLAYVLLSSHSPFAGDNKQETFLNISQCNFSFHEDLFGHISSQAKDFIQS 247
D+WS GV+ YV+L PF ++ F NIS ++ + L S A I+
Sbjct: 191 GPEVDVWSCGVILYVMLCRRLPFDDESIPVLFKNISNGVYTLPKFL----SPGAAGLIKR 246
Query: 248 CLVTDP 253
L+ +P
Sbjct: 247 MLIVNP 252
>pdb|3MN3|A Chain A, An Inhibited Conformation For The Protein Kinase Domain Of
The Saccharomyces Cerevisiae Ampk Homolog Snf1
Length = 271
Score = 120 bits (301), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 76/246 (30%), Positives = 127/246 (51%), Gaps = 8/246 (3%)
Query: 9 GGYQTLIFCMPSRGKFASVRKCTHKITKVEYAAKFIRKRRRSMDQMQDILHEAAVLYLAQ 68
G YQ I G F V+ H T + A K I K+ + MQ +
Sbjct: 4 GNYQ--IVKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLL 61
Query: 69 KSERIVGLHEIYETPHEMVLVLEMVPDGELQRLVDIQDGIPEQDTRSYMKQILEALAFLH 128
+ I+ L+++ ++ E+++V+E + EL + +D + EQ+ R + +QI+ A+ + H
Sbjct: 62 RHPHIIKLYDVIKSKDEIIMVIEYAGN-ELFDYIVQRDKMSEQEARRFFQQIISAVEYCH 120
Query: 129 DHNITHLDLKPQNILLTKDNNIKLCDFGISRVVNDVVEVKEIIGTPDYVAPEVLSYEPIS 188
H I H DLKP+N+LL + N+K+ DFG+S ++ D +K G+P+Y APEV+S + +
Sbjct: 121 RHKIVHRDLKPENLLLDEHLNVKIADFGLSNIMTDGNFLKTSCGSPNYAAPEVISGKLYA 180
Query: 189 LA-TDMWSVGVLAYVLLSSHSPFAGDNKQETFLNISQCNFSFHEDLFGHISSQAKDFIQS 247
D+WS GV+ YV+L PF ++ F NIS ++ + L S A I+
Sbjct: 181 GPEVDVWSCGVILYVMLCRRLPFDDESIPVLFKNISNGVYTLPKFL----SPGAAGLIKR 236
Query: 248 CLVTDP 253
L+ +P
Sbjct: 237 MLIVNP 242
>pdb|2QR8|A Chain A, 2.0a X-ray Structure Of C-terminal Kinase Domain Of P90
Ribosomal S6 Kinase 2 (rsk2)
pdb|4D9U|A Chain A, Rsk2 C-Terminal Kinase Domain, (E)-Tert-Butyl
3-(4-Amino-7-(3-
Hydroxypropyl)-5-P-Tolyl-7h-Pyrrolo[2,
3-D]pyrimidin-6-Yl)-2- Cyanoacrylate
pdb|4D9T|A Chain A, Rsk2 C-Terminal Kinase Domain With Inhibitor (E)-Methyl
3-(4-Amino-7-
(3-Hydroxypropyl)-5-P-Tolyl-7h-Pyrrolo[2,
3-D]pyrimidin-6-Yl)-2- Cyanoacrylate
Length = 342
Score = 120 bits (300), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 73/242 (30%), Positives = 120/242 (49%), Gaps = 18/242 (7%)
Query: 22 GKFASVRKCTHKITKVEYAAKFIRKRRRSMDQMQDILHEAAVLYLAQKSERIVGLHEIYE 81
G ++ ++C HK T +E+A K I K +R D E +L + I+ L ++Y+
Sbjct: 33 GSYSVCKRCIHKATNMEFAVKIIDKSKR------DPTEEIEILLRYGQHPNIITLKDVYD 86
Query: 82 TPHEMVLVLEMVPDGELQRLVDIQDGIPEQDTRSYMKQILEALAFLHDHNITHLDLKPQN 141
+ +V E++ GEL + Q E++ + + I + + +LH + H DLKP N
Sbjct: 87 DGKYVYVVTELMKGGELLDKILRQKFFSEREASAVLFTITKTVEYLHAQGVVHRDLKPSN 146
Query: 142 ILLTKDN----NIKLCDFGIS---RVVNDVVEVKEIIGTPDYVAPEVLSYEPISLATDMW 194
IL ++ +I++CDFG + R N ++ T ++VAPEVL + A D+W
Sbjct: 147 ILYVDESGNPESIRICDFGFAKQLRAENGLLMTP--CYTANFVAPEVLERQGYDAACDIW 204
Query: 195 SVGVLAYVLLSSHSPFAG---DNKQETFLNISQCNFSFHEDLFGHISSQAKDFIQSCLVT 251
S+GVL Y +L+ ++PFA D +E I FS + +S AKD + L
Sbjct: 205 SLGVLLYTMLTGYTPFANGPDDTPEEILARIGSGKFSLSGGYWNSVSDTAKDLVSKMLHV 264
Query: 252 DP 253
DP
Sbjct: 265 DP 266
>pdb|2QG5|A Chain A, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
pdb|2QG5|B Chain B, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
pdb|2QG5|D Chain D, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
Length = 294
Score = 119 bits (299), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 78/247 (31%), Positives = 121/247 (48%), Gaps = 27/247 (10%)
Query: 20 SRGKFASVRKCTHKITKVEYAAKFIRKR--------RRSMDQMQDILHEAAVLYLAQKSE 71
RG + V+ K T++ AAK I K ++ ++ M+ + H
Sbjct: 35 GRGSWGEVKIAVQKGTRIRRAAKKIPKYFVEDVDRFKQEIEIMKSLDHP----------- 83
Query: 72 RIVGLHEIYETPHEMVLVLEMVPDGELQRLVDIQDGIPEQDTRSYMKQILEALAFLHDHN 131
I+ L+E +E ++ LV+E+ GEL V + E D MK +L A+A+ H N
Sbjct: 84 NIIRLYETFEDNTDIYLVMELCTGGELFERVVHKRVFRESDAARIMKDVLSAVAYCHKLN 143
Query: 132 ITHLDLKPQNILL---TKDNNIKLCDFGISRVVNDVVEVKEIIGTPDYVAPEVLS--YEP 186
+ H DLKP+N L + D+ +KL DFG++ ++ +GTP YV+P+VL Y P
Sbjct: 144 VAHRDLKPENFLFLTDSPDSPLKLIDFGLAARFKPGKMMRTKVGTPYYVSPQVLEGLYGP 203
Query: 187 ISLATDMWSVGVLAYVLLSSHSPFAGDNKQETFLNISQCNFSFHEDLFGHISSQAKDFIQ 246
D WS GV+ YVLL + PF+ E L I + F+F E + ++S QA+ I+
Sbjct: 204 ---ECDEWSAGVMMYVLLCGYPPFSAPTDXEVMLKIREGTFTFPEKDWLNVSPQAESLIR 260
Query: 247 SCLVTDP 253
L P
Sbjct: 261 RLLTKSP 267
>pdb|3F3Z|A Chain A, Crystal Structure Of Cryptosporidium Parvum Calcium
Dependent Protein Kinase Cgd7_1840 In Presence Of
Indirubin E804
Length = 277
Score = 119 bits (298), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 78/247 (31%), Positives = 121/247 (48%), Gaps = 27/247 (10%)
Query: 20 SRGKFASVRKCTHKITKVEYAAKFIRKR--------RRSMDQMQDILHEAAVLYLAQKSE 71
RG + V+ K T++ AAK I K ++ ++ M+ + H
Sbjct: 18 GRGSWGEVKIAVQKGTRIRRAAKKIPKYFVEDVDRFKQEIEIMKSLDHP----------- 66
Query: 72 RIVGLHEIYETPHEMVLVLEMVPDGELQRLVDIQDGIPEQDTRSYMKQILEALAFLHDHN 131
I+ L+E +E ++ LV+E+ GEL V + E D MK +L A+A+ H N
Sbjct: 67 NIIRLYETFEDNTDIYLVMELCTGGELFERVVHKRVFRESDAARIMKDVLSAVAYCHKLN 126
Query: 132 ITHLDLKPQNILL---TKDNNIKLCDFGISRVVNDVVEVKEIIGTPDYVAPEVLS--YEP 186
+ H DLKP+N L + D+ +KL DFG++ ++ +GTP YV+P+VL Y P
Sbjct: 127 VAHRDLKPENFLFLTDSPDSPLKLIDFGLAARFKPGKMMRTKVGTPYYVSPQVLEGLYGP 186
Query: 187 ISLATDMWSVGVLAYVLLSSHSPFAGDNKQETFLNISQCNFSFHEDLFGHISSQAKDFIQ 246
D WS GV+ YVLL + PF+ E L I + F+F E + ++S QA+ I+
Sbjct: 187 ---ECDEWSAGVMMYVLLCGYPPFSAPTDXEVMLKIREGTFTFPEKDWLNVSPQAESLIR 243
Query: 247 SCLVTDP 253
L P
Sbjct: 244 RLLTKSP 250
>pdb|3IW4|A Chain A, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|B Chain B, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|C Chain C, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
Length = 360
Score = 119 bits (297), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 70/216 (32%), Positives = 111/216 (51%), Gaps = 2/216 (0%)
Query: 20 SRGKFASVRKCTHKITKVEYAAKFIRKRRRSMDQ-MQDILHEAAVLYLAQKSERIVGLHE 78
+G F V K T+ YA K ++K D ++ + E VL L K + LH
Sbjct: 28 GKGSFGKVMLADRKGTEELYAIKILKKDVVIQDDDVECTMVEKRVLALLDKPPFLTQLHS 87
Query: 79 IYETPHEMVLVLEMVPDGELQRLVDIQDGIPEQDTRSYMKQILEALAFLHDHNITHLDLK 138
++T + V+E V G+L + E Y +I L FLH I + DLK
Sbjct: 88 CFQTVDRLYFVMEYVNGGDLMYHIQQVGKFKEPQAVFYAAEISIGLFFLHKRGIIYRDLK 147
Query: 139 PQNILLTKDNNIKLCDFGISRV-VNDVVEVKEIIGTPDYVAPEVLSYEPISLATDMWSVG 197
N++L + +IK+ DFG+ + + D V +E GTPDY+APE+++Y+P + D W+ G
Sbjct: 148 LDNVMLDSEGHIKIADFGMCKEHMMDGVTTREFCGTPDYIAPEIIAYQPYGKSVDWWAYG 207
Query: 198 VLAYVLLSSHSPFAGDNKQETFLNISQCNFSFHEDL 233
VL Y +L+ PF G+++ E F +I + N S+ + L
Sbjct: 208 VLLYEMLAGQPPFDGEDEDELFQSIMEHNVSYPKSL 243
>pdb|2QR7|A Chain A, 2.0a X-Ray Structure Of C-Terminal Kinase Domain Of P90
Ribosomal S6 Kinase 2: Se-Met Derivative
Length = 342
Score = 117 bits (294), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 73/242 (30%), Positives = 117/242 (48%), Gaps = 18/242 (7%)
Query: 22 GKFASVRKCTHKITKVEYAAKFIRKRRRSMDQMQDILHEAAVLYLAQKSERIVGLHEIYE 81
G ++ ++C HK T E+A K I K +R D E +L + I+ L ++Y+
Sbjct: 33 GSYSVCKRCIHKATNXEFAVKIIDKSKR------DPTEEIEILLRYGQHPNIITLKDVYD 86
Query: 82 TPHEMVLVLEMVPDGELQRLVDIQDGIPEQDTRSYMKQILEALAFLHDHNITHLDLKPQN 141
+ +V E+ GEL + Q E++ + + I + + +LH + H DLKP N
Sbjct: 87 DGKYVYVVTELXKGGELLDKILRQKFFSEREASAVLFTITKTVEYLHAQGVVHRDLKPSN 146
Query: 142 ILLTKDN----NIKLCDFGIS---RVVNDVVEVKEIIGTPDYVAPEVLSYEPISLATDMW 194
IL ++ +I++CDFG + R N ++ T ++VAPEVL + A D+W
Sbjct: 147 ILYVDESGNPESIRICDFGFAKQLRAENGLLXTP--CYTANFVAPEVLERQGYDAACDIW 204
Query: 195 SVGVLAYVLLSSHSPFAG---DNKQETFLNISQCNFSFHEDLFGHISSQAKDFIQSCLVT 251
S+GVL Y L+ ++PFA D +E I FS + +S AKD + L
Sbjct: 205 SLGVLLYTXLTGYTPFANGPDDTPEEILARIGSGKFSLSGGYWNSVSDTAKDLVSKXLHV 264
Query: 252 DP 253
DP
Sbjct: 265 DP 266
>pdb|2YAC|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With
Nms-P937
pdb|4A4L|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
5-(2-Amino-Pyrimidin-4-Yl)-1h-Pyrrole Inhibitor
pdb|4A4O|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
2-
(2-Amino-Pyrimidin-4-Yl)-1,5,6,
7-Tetrahydro-Pyrrolopyridin- 4-One Inhibitor
Length = 311
Score = 117 bits (294), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 72/235 (30%), Positives = 118/235 (50%), Gaps = 5/235 (2%)
Query: 20 SRGKFASVRKCTHKITKVEYAAKFIRKRRRSMDQMQDILHEAAVLYLAQKSERIVGLHEI 79
+G FA + + TK +A K + K ++ + ++ + + +VG H
Sbjct: 26 GKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHGF 85
Query: 80 YETPHEMVLVLEMVPDGELQRLVDIQDGIPEQDTRSYMKQILEALAFLHDHNITHLDLKP 139
+E + +VLE+ L L + + E + R Y++QI+ +LH + + H DLK
Sbjct: 86 FEDNDFVFVVLELCRRRSLLELHKRRKALTEPEARYYLRQIVLGCQYLHRNRVIHRDLKL 145
Query: 140 QNILLTKDNNIKLCDFGI-SRVVNDVVEVKEIIGTPDYVAPEVLSYEPISLATDMWSVGV 198
N+ L +D +K+ DFG+ ++V D K + GTP+Y+APEVLS + S D+WS+G
Sbjct: 146 GNLFLNEDLEVKIGDFGLATKVEYDGERKKTLCGTPNYIAPEVLSKKGHSFEVDVWSIGC 205
Query: 199 LAYVLLSSHSPFAGDNKQETFLNISQCNFSFHEDLFGHISSQAKDFIQSCLVTDP 253
+ Y LL PF +ET+L I + +S + HI+ A IQ L TDP
Sbjct: 206 IMYTLLVGKPPFETSCLKETYLRIKKNEYSIPK----HINPVAASLIQKMLQTDP 256
>pdb|2V5Q|A Chain A, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
pdb|2V5Q|B Chain B, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
Length = 315
Score = 117 bits (294), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 72/235 (30%), Positives = 118/235 (50%), Gaps = 5/235 (2%)
Query: 20 SRGKFASVRKCTHKITKVEYAAKFIRKRRRSMDQMQDILHEAAVLYLAQKSERIVGLHEI 79
+G FA + + TK +A K + K ++ + ++ + + +VG H
Sbjct: 30 GKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHGF 89
Query: 80 YETPHEMVLVLEMVPDGELQRLVDIQDGIPEQDTRSYMKQILEALAFLHDHNITHLDLKP 139
+E + +VLE+ L L + + E + R Y++QI+ +LH + + H DLK
Sbjct: 90 FEDNDFVFVVLELCRRRSLLELHKRRKALTEPEARYYLRQIVLGCQYLHRNRVIHRDLKL 149
Query: 140 QNILLTKDNNIKLCDFGI-SRVVNDVVEVKEIIGTPDYVAPEVLSYEPISLATDMWSVGV 198
N+ L +D +K+ DFG+ ++V D K + GTP+Y+APEVLS + S D+WS+G
Sbjct: 150 GNLFLNEDLEVKIGDFGLATKVEYDGERKKTLCGTPNYIAPEVLSKKGHSFEVDVWSIGC 209
Query: 199 LAYVLLSSHSPFAGDNKQETFLNISQCNFSFHEDLFGHISSQAKDFIQSCLVTDP 253
+ Y LL PF +ET+L I + +S + HI+ A IQ L TDP
Sbjct: 210 IMYTLLVGKPPFETSCLKETYLRIKKNEYSIPK----HINPVAASLIQKMLQTDP 260
>pdb|3H4J|B Chain B, Crystal Structure Of Pombe Ampk Kdaid Fragment
pdb|3H4J|A Chain A, Crystal Structure Of Pombe Ampk Kdaid Fragment
Length = 336
Score = 117 bits (293), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 74/234 (31%), Positives = 126/234 (53%), Gaps = 8/234 (3%)
Query: 22 GKFASVRKCTHKITKVEYAAKFI-RKRRRSMDQMQDILHEAAVLYLAQKSERIVGLHEIY 80
G F V+ TH T+ + A KFI R+ + D + E + L L + I+ L+++
Sbjct: 20 GSFGKVKLATHYKTQQKVALKFISRQLLKKSDMHMRVEREISYLKLL-RHPHIIKLYDVI 78
Query: 81 ETPHEMVLVLEMVPDGELQRLVDIQDGIPEQDTRSYMKQILEALAFLHDHNITHLDLKPQ 140
TP ++V+V+E GEL + + + E + R + +QI+ A+ + H H I H DLKP+
Sbjct: 79 TTPTDIVMVIEYA-GGELFDYIVEKKRMTEDEGRRFFQQIICAIEYCHRHKIVHRDLKPE 137
Query: 141 NILLTKDNNIKLCDFGISRVVNDVVEVKEIIGTPDYVAPEVLSYEPIS-LATDMWSVGVL 199
N+LL + N+K+ DFG+S ++ D +K G+P+Y APEV++ + + D+WS G++
Sbjct: 138 NLLLDDNLNVKIADFGLSNIMTDGNFLKTSCGSPNYAAPEVINGKLYAGPEVDVWSCGIV 197
Query: 200 AYVLLSSHSPFAGDNKQETFLNISQCNFSFHEDLFGHISSQAKDFIQSCLVTDP 253
YV+L PF + F ++ C + + L S A+ I+ +V DP
Sbjct: 198 LYVMLVGRLPFDDEFIPNLFKKVNSCVYVMPDFL----SPGAQSLIRRMIVADP 247
>pdb|3KB7|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 311
Score = 117 bits (293), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 72/235 (30%), Positives = 118/235 (50%), Gaps = 5/235 (2%)
Query: 20 SRGKFASVRKCTHKITKVEYAAKFIRKRRRSMDQMQDILHEAAVLYLAQKSERIVGLHEI 79
+G FA + + TK +A K + K ++ + ++ + + +VG H
Sbjct: 26 GKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHGF 85
Query: 80 YETPHEMVLVLEMVPDGELQRLVDIQDGIPEQDTRSYMKQILEALAFLHDHNITHLDLKP 139
+E + +VLE+ L L + + E + R Y++QI+ +LH + + H DLK
Sbjct: 86 FEDNDFVFVVLELCRRRSLLELHKRRKALTEPEARYYLRQIVLGCQYLHRNRVIHRDLKL 145
Query: 140 QNILLTKDNNIKLCDFGI-SRVVNDVVEVKEIIGTPDYVAPEVLSYEPISLATDMWSVGV 198
N+ L +D +K+ DFG+ ++V D K + GTP+Y+APEVLS + S D+WS+G
Sbjct: 146 GNLFLNEDLEVKIGDFGLATKVEYDGERKKTLCGTPNYIAPEVLSKKGHSFEVDVWSIGC 205
Query: 199 LAYVLLSSHSPFAGDNKQETFLNISQCNFSFHEDLFGHISSQAKDFIQSCLVTDP 253
+ Y LL PF +ET+L I + +S + HI+ A IQ L TDP
Sbjct: 206 IMYTLLVGKPPFETSCLKETYLRIKKNEYSIPK----HINPVAASLIQKMLQTDP 256
>pdb|2RKU|A Chain A, Structure Of Plk1 In Complex With Bi2536
Length = 294
Score = 117 bits (293), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 72/235 (30%), Positives = 119/235 (50%), Gaps = 5/235 (2%)
Query: 20 SRGKFASVRKCTHKITKVEYAAKFIRKRRRSMDQMQDILHEAAVLYLAQKSERIVGLHEI 79
+G FA + + TK +A K + K ++ + ++ + + +VG H
Sbjct: 24 GKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHGF 83
Query: 80 YETPHEMVLVLEMVPDGELQRLVDIQDGIPEQDTRSYMKQILEALAFLHDHNITHLDLKP 139
+E + +VLE+ L L + + E + R Y++QI+ +LH + + H DLK
Sbjct: 84 FEDNDFVFVVLELCRRRSLLELHKRRKALTEPEARYYLRQIVLGCQYLHRNRVIHRDLKL 143
Query: 140 QNILLTKDNNIKLCDFGISRVVNDVVEVKEII-GTPDYVAPEVLSYEPISLATDMWSVGV 198
N+ L +D +K+ DFG++ V E K+++ GTP+Y+APEVLS + S D+WS+G
Sbjct: 144 GNLFLNEDLEVKIGDFGLATKVEYDGERKKVLCGTPNYIAPEVLSKKGHSFEVDVWSIGC 203
Query: 199 LAYVLLSSHSPFAGDNKQETFLNISQCNFSFHEDLFGHISSQAKDFIQSCLVTDP 253
+ Y LL PF +ET+L I + +S + HI+ A IQ L TDP
Sbjct: 204 IMYTLLVGKPPFETSCLKETYLRIKKNEYSIPK----HINPVAASLIQKMLQTDP 254
>pdb|3THB|A Chain A, Structure Of Plk1 Kinase Domain In Complex With A
Benzolactam-Derived Inhibitor
Length = 333
Score = 117 bits (293), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 72/235 (30%), Positives = 119/235 (50%), Gaps = 5/235 (2%)
Query: 20 SRGKFASVRKCTHKITKVEYAAKFIRKRRRSMDQMQDILHEAAVLYLAQKSERIVGLHEI 79
+G FA + + TK +A K + K ++ + ++ + + +VG H
Sbjct: 48 GKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHGF 107
Query: 80 YETPHEMVLVLEMVPDGELQRLVDIQDGIPEQDTRSYMKQILEALAFLHDHNITHLDLKP 139
+E + +VLE+ L L + + E + R Y++QI+ +LH + + H DLK
Sbjct: 108 FEDNDFVFVVLELCRRRSLLELHKRRKALTEPEARYYLRQIVLGCQYLHRNRVIHRDLKL 167
Query: 140 QNILLTKDNNIKLCDFGISRVVNDVVEVKEII-GTPDYVAPEVLSYEPISLATDMWSVGV 198
N+ L +D +K+ DFG++ V E K+++ GTP+Y+APEVLS + S D+WS+G
Sbjct: 168 GNLFLNEDLEVKIGDFGLATKVEYDGERKKVLCGTPNYIAPEVLSKKGHSFEVDVWSIGC 227
Query: 199 LAYVLLSSHSPFAGDNKQETFLNISQCNFSFHEDLFGHISSQAKDFIQSCLVTDP 253
+ Y LL PF +ET+L I + +S + HI+ A IQ L TDP
Sbjct: 228 IMYTLLVGKPPFETSCLKETYLRIKKNEYSIPK----HINPVAASLIQKMLQTDP 278
>pdb|2OU7|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|2OWB|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|3FC2|A Chain A, Plk1 In Complex With Bi6727
Length = 335
Score = 117 bits (292), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 72/235 (30%), Positives = 119/235 (50%), Gaps = 5/235 (2%)
Query: 20 SRGKFASVRKCTHKITKVEYAAKFIRKRRRSMDQMQDILHEAAVLYLAQKSERIVGLHEI 79
+G FA + + TK +A K + K ++ + ++ + + +VG H
Sbjct: 50 GKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHGF 109
Query: 80 YETPHEMVLVLEMVPDGELQRLVDIQDGIPEQDTRSYMKQILEALAFLHDHNITHLDLKP 139
+E + +VLE+ L L + + E + R Y++QI+ +LH + + H DLK
Sbjct: 110 FEDNDFVFVVLELCRRRSLLELHKRRKALTEPEARYYLRQIVLGCQYLHRNRVIHRDLKL 169
Query: 140 QNILLTKDNNIKLCDFGISRVVNDVVEVKEII-GTPDYVAPEVLSYEPISLATDMWSVGV 198
N+ L +D +K+ DFG++ V E K+++ GTP+Y+APEVLS + S D+WS+G
Sbjct: 170 GNLFLNEDLEVKIGDFGLATKVEYDGERKKVLCGTPNYIAPEVLSKKGHSFEVDVWSIGC 229
Query: 199 LAYVLLSSHSPFAGDNKQETFLNISQCNFSFHEDLFGHISSQAKDFIQSCLVTDP 253
+ Y LL PF +ET+L I + +S + HI+ A IQ L TDP
Sbjct: 230 IMYTLLVGKPPFETSCLKETYLRIKKNEYSIPK----HINPVAASLIQKMLQTDP 280
>pdb|2WNT|A Chain A, Crystal Structure Of The Human Ribosomal Protein S6 Kinase
pdb|2WNT|B Chain B, Crystal Structure Of The Human Ribosomal Protein S6 Kinase
Length = 330
Score = 117 bits (292), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 71/242 (29%), Positives = 117/242 (48%), Gaps = 18/242 (7%)
Query: 22 GKFASVRKCTHKITKVEYAAKFIRKRRRSMDQMQDILHEAAVLYLAQKSERIVGLHEIYE 81
G ++ ++C HK T +EYA K I K +R D E +L + I+ L ++Y+
Sbjct: 38 GSYSECKRCVHKATNMEYAVKVIDKSKR------DPSEEIEILLRYGQHPNIITLKDVYD 91
Query: 82 TPHEMVLVLEMVPDGELQRLVDIQDGIPEQDTRSYMKQILEALAFLHDHNITHLDLKPQN 141
+ LV E++ GEL + Q E++ + I + + +LH + H DLKP N
Sbjct: 92 DGKHVYLVTELMRGGELLDKILRQKFFSEREASFVLHTIGKTVEYLHSQGVVHRDLKPSN 151
Query: 142 ILLTKDNN----IKLCDFGIS---RVVNDVVEVKEIIGTPDYVAPEVLSYEPISLATDMW 194
IL ++ +++CDFG + R N ++ T ++VAPEVL + D+W
Sbjct: 152 ILYVDESGNPECLRICDFGFAKQLRAENGLLMTP--CYTANFVAPEVLKRQGYDEGCDIW 209
Query: 195 SVGVLAYVLLSSHSPFA---GDNKQETFLNISQCNFSFHEDLFGHISSQAKDFIQSCLVT 251
S+G+L Y +L+ ++PFA D +E I F+ + +S AKD + L
Sbjct: 210 SLGILLYTMLAGYTPFANGPSDTPEEILTRIGSGKFTLSGGNWNTVSETAKDLVSKMLHV 269
Query: 252 DP 253
DP
Sbjct: 270 DP 271
>pdb|3RNY|A Chain A, Crystal Structure Of Human Rsk1 C-Terminal Kinase Domain
pdb|3RNY|B Chain B, Crystal Structure Of Human Rsk1 C-Terminal Kinase Domain
Length = 346
Score = 116 bits (291), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 71/242 (29%), Positives = 117/242 (48%), Gaps = 18/242 (7%)
Query: 22 GKFASVRKCTHKITKVEYAAKFIRKRRRSMDQMQDILHEAAVLYLAQKSERIVGLHEIYE 81
G ++ ++C HK T +EYA K I K +R D E +L + I+ L ++Y+
Sbjct: 38 GSYSECKRCVHKATNMEYAVKVIDKSKR------DPSEEIEILLRYGQHPNIITLKDVYD 91
Query: 82 TPHEMVLVLEMVPDGELQRLVDIQDGIPEQDTRSYMKQILEALAFLHDHNITHLDLKPQN 141
+ LV E++ GEL + Q E++ + I + + +LH + H DLKP N
Sbjct: 92 DGKHVYLVTELMRGGELLDKILRQKFFSEREASFVLHTIGKTVEYLHSQGVVHRDLKPSN 151
Query: 142 ILLTKDNN----IKLCDFGIS---RVVNDVVEVKEIIGTPDYVAPEVLSYEPISLATDMW 194
IL ++ +++CDFG + R N ++ T ++VAPEVL + D+W
Sbjct: 152 ILYVDESGNPECLRICDFGFAKQLRAENGLLMTP--CYTANFVAPEVLKRQGYDEGCDIW 209
Query: 195 SVGVLAYVLLSSHSPFA---GDNKQETFLNISQCNFSFHEDLFGHISSQAKDFIQSCLVT 251
S+G+L Y +L+ ++PFA D +E I F+ + +S AKD + L
Sbjct: 210 SLGILLYTMLAGYTPFANGPSDTPEEILTRIGSGKFTLSGGNWNTVSETAKDLVSKMLHV 269
Query: 252 DP 253
DP
Sbjct: 270 DP 271
>pdb|3COK|A Chain A, Crystal Structure Of Plk4 Kinase
pdb|3COK|B Chain B, Crystal Structure Of Plk4 Kinase
Length = 278
Score = 116 bits (291), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 72/236 (30%), Positives = 118/236 (50%), Gaps = 6/236 (2%)
Query: 20 SRGKFASVRKCTHKITKVEYAAKFIRKRRRSMDQMQDILHEAAVLYLAQKSERIVGLHEI 79
+G FA V + T +E A K I K+ M + ++ K I+ L+
Sbjct: 20 GKGSFAGVYRAESIHTGLEVAIKMIDKKAMYKAGMVQRVQNEVKIHCQLKHPSILELYNY 79
Query: 80 YETPHEMVLVLEMVPDGELQR-LVDIQDGIPEQDTRSYMKQILEALAFLHDHNITHLDLK 138
+E + + LVLEM +GE+ R L + E + R +M QI+ + +LH H I H DL
Sbjct: 80 FEDSNYVYLVLEMCHNGEMNRYLKNRVKPFSENEARHFMHQIITGMLYLHSHGILHRDLT 139
Query: 139 PQNILLTKDNNIKLCDFGISRVVNDVVEVK-EIIGTPDYVAPEVLSYEPISLATDMWSVG 197
N+LLT++ NIK+ DFG++ + E + GTP+Y++PE+ + L +D+WS+G
Sbjct: 140 LSNLLLTRNMNIKIADFGLATQLKMPHEKHYTLCGTPNYISPEIATRSAHGLESDVWSLG 199
Query: 198 VLAYVLLSSHSPFAGDNKQETFLNISQCNFSFHEDLFGHISSQAKDFIQSCLVTDP 253
+ Y LL PF D + T + ++ ++ +S +AKD I L +P
Sbjct: 200 CMFYTLLIGRPPFDTDTVKNTLNKVVLADY----EMPSFLSIEAKDLIHQLLRRNP 251
>pdb|2I0E|A Chain A, Structure Of Catalytic Domain Of Human Protein Kinase C
Beta Ii Complexed With A Bisindolylmaleimide Inhibitor
pdb|2I0E|B Chain B, Structure Of Catalytic Domain Of Human Protein Kinase C
Beta Ii Complexed With A Bisindolylmaleimide Inhibitor
Length = 353
Score = 115 bits (287), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 67/216 (31%), Positives = 109/216 (50%), Gaps = 2/216 (0%)
Query: 20 SRGKFASVRKCTHKITKVEYAAKFIRKRRRSMDQ-MQDILHEAAVLYLAQKSERIVGLHE 78
+G F V K T YA K ++K D ++ + E VL L K + LH
Sbjct: 29 GKGSFGKVMLSERKGTDELYAVKILKKDVVIQDDDVECTMVEKRVLALPGKPPFLTQLHS 88
Query: 79 IYETPHEMVLVLEMVPDGELQRLVDIQDGIPEQDTRSYMKQILEALAFLHDHNITHLDLK 138
++T + V+E V G+L + E Y +I L FL I + DLK
Sbjct: 89 CFQTMDRLYFVMEYVNGGDLMYHIQQVGRFKEPHAVFYAAEIAIGLFFLQSKGIIYRDLK 148
Query: 139 PQNILLTKDNNIKLCDFGISRV-VNDVVEVKEIIGTPDYVAPEVLSYEPISLATDMWSVG 197
N++L + +IK+ DFG+ + + D V K GTPDY+APE+++Y+P + D W+ G
Sbjct: 149 LDNVMLDSEGHIKIADFGMCKENIWDGVTTKXFCGTPDYIAPEIIAYQPYGKSVDWWAFG 208
Query: 198 VLAYVLLSSHSPFAGDNKQETFLNISQCNFSFHEDL 233
VL Y +L+ +PF G+++ E F +I + N ++ + +
Sbjct: 209 VLLYEMLAGQAPFEGEDEDELFQSIMEHNVAYPKSM 244
>pdb|2YZA|A Chain A, Crystal Structure Of Kinase Domain Of Human
5'-Amp-Activated Protein Kinase Alpha-2 Subunit Mutant
(T172d)
pdb|3AQV|A Chain A, Human Amp-Activated Protein Kinase Alpha 2 Subunit Kinase
Domain (T172d) Complexed With Compound C
Length = 276
Score = 114 bits (286), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 73/234 (31%), Positives = 119/234 (50%), Gaps = 7/234 (2%)
Query: 22 GKFASVRKCTHKITKVEYAAKFI-RKRRRSMDQMQDILHEAAVLYLAQKSERIVGLHEIY 80
G F V+ H++T + A K + R++ RS+D + I E L L + I+ L+++
Sbjct: 22 GTFGKVKIGEHQLTGHKVAVKILNRQKIRSLDVVGKIKREIQNLKLF-RHPHIIKLYQVI 80
Query: 81 ETPHEMVLVLEMVPDGELQRLVDIQDGIPEQDTRSYMKQILEALAFLHDHNITHLDLKPQ 140
TP + +V+E V GEL + + E + R +QIL A+ + H H + H DLKP+
Sbjct: 81 STPTDFFMVMEYVSGGELFDYICKHGRVEEMEARRLFQQILSAVDYCHRHMVVHRDLKPE 140
Query: 141 NILLTKDNNIKLCDFGISRVVNDVVEVKEIIGTPDYVAPEVLSYEPISLA-TDMWSVGVL 199
N+LL N K+ DFG+S +++D +++ G+P+Y APEV+S + D+WS GV+
Sbjct: 141 NVLLDAHMNAKIADFGLSNMMSDGEFLRDSCGSPNYAAPEVISGRLYAGPEVDIWSCGVI 200
Query: 200 AYVLLSSHSPFAGDNKQETFLNISQCNFSFHEDLFGHISSQAKDFIQSCLVTDP 253
Y LL PF ++ F I F E +++ + L DP
Sbjct: 201 LYALLCGTLPFDDEHVPTLFKKIRGGVFYIPE----YLNRSVATLLMHMLQVDP 250
>pdb|3PFQ|A Chain A, Crystal Structure And Allosteric Activation Of Protein
Kinase C Beta Ii
Length = 674
Score = 114 bits (285), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 67/216 (31%), Positives = 109/216 (50%), Gaps = 2/216 (0%)
Query: 20 SRGKFASVRKCTHKITKVEYAAKFIRKRRRSMDQ-MQDILHEAAVLYLAQKSERIVGLHE 78
+G F V K T YA K ++K D ++ + E VL L K + LH
Sbjct: 350 GKGSFGKVMLSERKGTDELYAVKILKKDVVIQDDDVECTMVEKRVLALPGKPPFLTQLHS 409
Query: 79 IYETPHEMVLVLEMVPDGELQRLVDIQDGIPEQDTRSYMKQILEALAFLHDHNITHLDLK 138
++T + V+E V G+L + E Y +I L FL I + DLK
Sbjct: 410 CFQTMDRLYFVMEYVNGGDLMYHIQQVGRFKEPHAVFYAAEIAIGLFFLQSKGIIYRDLK 469
Query: 139 PQNILLTKDNNIKLCDFGISRV-VNDVVEVKEIIGTPDYVAPEVLSYEPISLATDMWSVG 197
N++L + +IK+ DFG+ + + D V K GTPDY+APE+++Y+P + D W+ G
Sbjct: 470 LDNVMLDSEGHIKIADFGMCKENIWDGVTTKXFCGTPDYIAPEIIAYQPYGKSVDWWAFG 529
Query: 198 VLAYVLLSSHSPFAGDNKQETFLNISQCNFSFHEDL 233
VL Y +L+ +PF G+++ E F +I + N ++ + +
Sbjct: 530 VLLYEMLAGQAPFEGEDEDELFQSIMEHNVAYPKSM 565
>pdb|2H6D|A Chain A, Protein Kinase Domain Of The Human 5'-Amp-Activated
Protein Kinase Catalytic Subunit Alpha-2 (Ampk Alpha-2
Chain)
Length = 276
Score = 114 bits (284), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 73/234 (31%), Positives = 118/234 (50%), Gaps = 7/234 (2%)
Query: 22 GKFASVRKCTHKITKVEYAAKFI-RKRRRSMDQMQDILHEAAVLYLAQKSERIVGLHEIY 80
G F V+ H++T + A K + R++ RS+D + I E L L + I+ L+++
Sbjct: 22 GTFGKVKIGEHQLTGHKVAVKILNRQKIRSLDVVGKIKREIQNLKLF-RHPHIIKLYQVI 80
Query: 81 ETPHEMVLVLEMVPDGELQRLVDIQDGIPEQDTRSYMKQILEALAFLHDHNITHLDLKPQ 140
TP + +V+E V GEL + + E + R +QIL A+ + H H + H DLKP+
Sbjct: 81 STPTDFFMVMEYVSGGELFDYICKHGRVEEMEARRLFQQILSAVDYCHRHMVVHRDLKPE 140
Query: 141 NILLTKDNNIKLCDFGISRVVNDVVEVKEIIGTPDYVAPEVLSYEPISLA-TDMWSVGVL 199
N+LL N K+ DFG+S +++D ++ G+P+Y APEV+S + D+WS GV+
Sbjct: 141 NVLLDAHMNAKIADFGLSNMMSDGEFLRTSCGSPNYAAPEVISGRLYAGPEVDIWSCGVI 200
Query: 200 AYVLLSSHSPFAGDNKQETFLNISQCNFSFHEDLFGHISSQAKDFIQSCLVTDP 253
Y LL PF ++ F I F E +++ + L DP
Sbjct: 201 LYALLCGTLPFDDEHVPTLFKKIRGGVFYIPE----YLNRSVATLLMHMLQVDP 250
>pdb|3DB6|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 902
pdb|3D5X|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Wortmannin.
pdb|3DBE|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 557
pdb|3DBF|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 562
Length = 301
Score = 114 bits (284), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 67/235 (28%), Positives = 118/235 (50%), Gaps = 5/235 (2%)
Query: 20 SRGKFASVRKCTHKITKVEYAAKFIRKRRRSMDQMQDILHEAAVLYLAQKSERIVGLHEI 79
+G FA + T TK +A K + K ++ + ++ + + +VG H
Sbjct: 35 GKGGFAKCYEITDMDTKEVFAGKVVPKSMLLKPHQKEKMSTEIAIHKSLDNPHVVGFHGF 94
Query: 80 YETPHEMVLVLEMVPDGELQRLVDIQDGIPEQDTRSYMKQILEALAFLHDHNITHLDLKP 139
+E + +VLE+ L L + + E + R +M+Q ++ + +LH++ + H DLK
Sbjct: 95 FEDDDFVYVVLEICRRRSLLELHKRRKAVTEPEARYFMRQTIQGVQYLHNNRVIHRDLKL 154
Query: 140 QNILLTKDNNIKLCDFGI-SRVVNDVVEVKEIIGTPDYVAPEVLSYEPISLATDMWSVGV 198
N+ L D ++K+ DFG+ +++ D K++ GTP+Y+APEVL + S D+WS+G
Sbjct: 155 GNLFLNDDMDVKIGDFGLATKIEFDGERKKDLCGTPNYIAPEVLCKKGHSFEVDIWSLGC 214
Query: 199 LAYVLLSSHSPFAGDNKQETFLNISQCNFSFHEDLFGHISSQAKDFIQSCLVTDP 253
+ Y LL PF +ET++ I + +S HI+ A I+ L DP
Sbjct: 215 ILYTLLVGKPPFETSCLKETYIRIKKNEYSVPR----HINPVASALIRRMLHADP 265
>pdb|2Y94|A Chain A, Structure Of An Active Form Of Mammalian Ampk
Length = 476
Score = 113 bits (283), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 70/211 (33%), Positives = 115/211 (54%), Gaps = 5/211 (2%)
Query: 22 GKFASVRKCTHKITKVEYAAKFI-RKRRRSMDQMQDILHEAAVLYLAQKSERIVGLHEIY 80
G F V+ H++T + A K + R++ RS+D + I E L L + I+ L+++
Sbjct: 27 GTFGKVKVGKHELTGHKVAVKILNRQKIRSLDVVGKIRREIQNLKLF-RHPHIIKLYQVI 85
Query: 81 ETPHEMVLVLEMVPDGELQRLVDIQDGIPEQDTRSYMKQILEALAFLHDHNITHLDLKPQ 140
TP ++ +V+E V GEL + + E+++R +QIL + + H H + H DLKP+
Sbjct: 86 STPSDIFMVMEYVSGGELFDYICKNGRLDEKESRRLFQQILSGVDYCHRHMVVHRDLKPE 145
Query: 141 NILLTKDNNIKLCDFGISRVVNDVVEVKEIIGTPDYVAPEVLSYEPIS-LATDMWSVGVL 199
N+LL N K+ DFG+S +++D ++ G+P+Y APEV+S + D+WS GV+
Sbjct: 146 NVLLDAHMNAKIADFGLSNMMSDGEFLRXSCGSPNYAAPEVISGRLYAGPEVDIWSSGVI 205
Query: 200 AYVLLSSHSPFAGDNKQETFLNISQCNFSFH 230
Y LL PF D+ F I C+ F+
Sbjct: 206 LYALLCGTLPFDDDHVPTLFKKI--CDGIFY 234
>pdb|3D5V|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain.
pdb|3DB8|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 041
pdb|3DBC|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 257
pdb|3DBD|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 094
Length = 317
Score = 113 bits (283), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 67/235 (28%), Positives = 118/235 (50%), Gaps = 5/235 (2%)
Query: 20 SRGKFASVRKCTHKITKVEYAAKFIRKRRRSMDQMQDILHEAAVLYLAQKSERIVGLHEI 79
+G FA + T TK +A K + K ++ + ++ + + +VG H
Sbjct: 51 GKGGFAKCYEITDMDTKEVFAGKVVPKSMLLKPHQKEKMSTEIAIHKSLDNPHVVGFHGF 110
Query: 80 YETPHEMVLVLEMVPDGELQRLVDIQDGIPEQDTRSYMKQILEALAFLHDHNITHLDLKP 139
+E + +VLE+ L L + + E + R +M+Q ++ + +LH++ + H DLK
Sbjct: 111 FEDDDFVYVVLEICRRRSLLELHKRRKAVTEPEARYFMRQTIQGVQYLHNNRVIHRDLKL 170
Query: 140 QNILLTKDNNIKLCDFGI-SRVVNDVVEVKEIIGTPDYVAPEVLSYEPISLATDMWSVGV 198
N+ L D ++K+ DFG+ +++ D K++ GTP+Y+APEVL + S D+WS+G
Sbjct: 171 GNLFLNDDMDVKIGDFGLATKIEFDGERKKDLCGTPNYIAPEVLCKKGHSFEVDIWSLGC 230
Query: 199 LAYVLLSSHSPFAGDNKQETFLNISQCNFSFHEDLFGHISSQAKDFIQSCLVTDP 253
+ Y LL PF +ET++ I + +S HI+ A I+ L DP
Sbjct: 231 ILYTLLVGKPPFETSCLKETYIRIKKNEYSVPR----HINPVASALIRRMLHADP 281
>pdb|3D5W|A Chain A, Crystal Structure Of A Phosphorylated Polo-Like Kinase 1
(Plk1) Catalytic Domain In Complex With Adp
Length = 317
Score = 112 bits (281), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 67/235 (28%), Positives = 117/235 (49%), Gaps = 5/235 (2%)
Query: 20 SRGKFASVRKCTHKITKVEYAAKFIRKRRRSMDQMQDILHEAAVLYLAQKSERIVGLHEI 79
+G FA + T TK +A K + K ++ + ++ + + +VG H
Sbjct: 51 GKGGFAKCYEITDMDTKEVFAGKVVPKSMLLKPHQKEKMSTEIAIHKSLDNPHVVGFHGF 110
Query: 80 YETPHEMVLVLEMVPDGELQRLVDIQDGIPEQDTRSYMKQILEALAFLHDHNITHLDLKP 139
+E + +VLE+ L L + + E + R +M+Q ++ + +LH++ + H DLK
Sbjct: 111 FEDDDFVYVVLEICRRRSLLELHKRRKAVTEPEARYFMRQTIQGVQYLHNNRVIHRDLKL 170
Query: 140 QNILLTKDNNIKLCDFGI-SRVVNDVVEVKEIIGTPDYVAPEVLSYEPISLATDMWSVGV 198
N+ L D ++K+ DFG+ +++ D K + GTP+Y+APEVL + S D+WS+G
Sbjct: 171 GNLFLNDDMDVKIGDFGLATKIEFDGERKKXLCGTPNYIAPEVLCKKGHSFEVDIWSLGC 230
Query: 199 LAYVLLSSHSPFAGDNKQETFLNISQCNFSFHEDLFGHISSQAKDFIQSCLVTDP 253
+ Y LL PF +ET++ I + +S HI+ A I+ L DP
Sbjct: 231 ILYTLLVGKPPFETSCLKETYIRIKKNEYSVPR----HINPVASALIRRMLHADP 281
>pdb|3D5U|A Chain A, Crystal Structure Of A Wildtype Polo-Like Kinase 1 (Plk1)
Catalytic Domain
Length = 317
Score = 112 bits (281), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 67/235 (28%), Positives = 117/235 (49%), Gaps = 5/235 (2%)
Query: 20 SRGKFASVRKCTHKITKVEYAAKFIRKRRRSMDQMQDILHEAAVLYLAQKSERIVGLHEI 79
+G FA + T TK +A K + K ++ + ++ + + +VG H
Sbjct: 51 GKGGFAKCYEITDMDTKEVFAGKVVPKSMLLKPHQKEKMSTEIAIHKSLDNPHVVGFHGF 110
Query: 80 YETPHEMVLVLEMVPDGELQRLVDIQDGIPEQDTRSYMKQILEALAFLHDHNITHLDLKP 139
+E + +VLE+ L L + + E + R +M+Q ++ + +LH++ + H DLK
Sbjct: 111 FEDDDFVYVVLEICRRRSLLELHKRRKAVTEPEARYFMRQTIQGVQYLHNNRVIHRDLKL 170
Query: 140 QNILLTKDNNIKLCDFGI-SRVVNDVVEVKEIIGTPDYVAPEVLSYEPISLATDMWSVGV 198
N+ L D ++K+ DFG+ +++ D K + GTP+Y+APEVL + S D+WS+G
Sbjct: 171 GNLFLNDDMDVKIGDFGLATKIEFDGERKKTLCGTPNYIAPEVLCKKGHSFEVDIWSLGC 230
Query: 199 LAYVLLSSHSPFAGDNKQETFLNISQCNFSFHEDLFGHISSQAKDFIQSCLVTDP 253
+ Y LL PF +ET++ I + +S HI+ A I+ L DP
Sbjct: 231 ILYTLLVGKPPFETSCLKETYIRIKKNEYSVPR----HINPVASALIRRMLHADP 281
>pdb|2WZJ|A Chain A, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|B Chain B, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|C Chain C, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|D Chain D, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|E Chain E, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|F Chain F, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
Length = 327
Score = 112 bits (279), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 68/235 (28%), Positives = 118/235 (50%), Gaps = 6/235 (2%)
Query: 20 SRGKFASVRKCTHKITKVEYAAKFIRKRRRSMDQMQDILHEAAVLYLAQKSERIVGLHEI 79
+G FA V+ H +T E A + I K + + +Q + E ++ + IV L E+
Sbjct: 23 GKGNFAKVKLARHILTGKEVAVRIIDKTQLNSSSLQKLFREVRIMKVLNHPN-IVKLFEV 81
Query: 80 YETPHEMVLVLEMVPDGELQRLVDIQDGIPEQDTRSYMKQILEALAFLHDHNITHLDLKP 139
ET + LV+E GE+ + + E++ R+ +QI+ A+ + H I H DLK
Sbjct: 82 IETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFRQIVSAVQYCHQKFIVHRDLKA 141
Query: 140 QNILLTKDNNIKLCDFGISRVVNDVVEVKEIIGTPDYVAPEVLSYEPI-SLATDMWSVGV 198
+N+LL D NIK+ DFG S ++ E G+P Y APE+ + D+WS+GV
Sbjct: 142 ENLLLDADMNIKIADFGFSNEFTFGNKLDEFCGSPPYAAPELFQGKKYDGPEVDVWSLGV 201
Query: 199 LAYVLLSSHSPFAGDNKQETFLNISQCNFSFHEDLFGHISSQAKDFIQSCLVTDP 253
+ Y L+S PF G N +E + + + + ++S+ ++ ++ L+ +P
Sbjct: 202 ILYTLVSGSLPFDGQNLKELRERVLRGKYR----IPFYMSTDCENLLKKFLILNP 252
>pdb|2R5T|A Chain A, Crystal Structure Of Inactive Serum And Glucocorticoid-
Regulated Kinase 1 In Complex With Amp-Pnp
pdb|3HDM|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 1
pdb|3HDN|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 2
Length = 373
Score = 112 bits (279), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 73/235 (31%), Positives = 111/235 (47%), Gaps = 6/235 (2%)
Query: 20 SRGKFASVRKCTHKITKVEYAAKFIRKRR-RSMDQMQDILHEAAVLYLAQKSERIVGLHE 78
+G F V HK +V YA K ++K+ + + I+ E VL K +VGLH
Sbjct: 47 GKGSFGKVLLARHKAEEVFYAVKVLQKKAILKKKEEKHIMSERNVLLKNVKHPFLVGLHF 106
Query: 79 IYETPHEMVLVLEMVPDGELQRLVDIQDGIPEQDTRSYMKQILEALAFLHDHNITHLDLK 138
++T ++ VL+ + GEL + + E R Y +I AL +LH NI + DLK
Sbjct: 107 SFQTADKLYFVLDYINGGELFYHLQRERCFLEPRARFYAAEIASALGYLHSLNIVYRDLK 166
Query: 139 PQNILLTKDNNIKLCDFGISRV-VNDVVEVKEIIGTPDYVAPEVLSYEPISLATDMWSVG 197
P+NILL +I L DFG+ + + GTP+Y+APEVL +P D W +G
Sbjct: 167 PENILLDSQGHIVLTDFGLCKENIEHNSTTSTFCGTPEYLAPEVLHKQPYDRTVDWWCLG 226
Query: 198 VLAYVLLSSHSPFAGDNKQETFLNISQCNFSFHEDLFGHISSQAKDFIQSCLVTD 252
+ Y +L PF N E + NI + I++ A+ ++ L D
Sbjct: 227 AVLYEMLYGLPPFYSRNTAEMYDNILNKPLQLKPN----ITNSARHLLEGLLQKD 277
>pdb|4A07|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps171 Bound To The Pif-Pocket
pdb|4AW0|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps182 Bound To The Pif-Pocket
Length = 311
Score = 112 bits (279), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 70/244 (28%), Positives = 119/244 (48%), Gaps = 23/244 (9%)
Query: 20 SRGKFASVRKCTHKITKVEYAAKFIRKRRRSMDQMQDILHEAAVLYLAQKSERI------ 73
G F++V T EYA K + KR I+ E V Y+ ++ + +
Sbjct: 41 GEGSFSTVVLARELATSREYAIKILEKRH--------IIKENKVPYVTRERDVMSRLDHP 92
Query: 74 --VGLHEIYETPHEMVLVLEMVPDGELQRLVDIQDGIPEQDTRSYMKQILEALAFLHDHN 131
V L+ ++ ++ L +GEL + + E TR Y +I+ AL +LH
Sbjct: 93 FFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKG 152
Query: 132 ITHLDLKPQNILLTKDNNIKLCDFGISRVV---NDVVEVKEIIGTPDYVAPEVLSYEPIS 188
I H DLKP+NILL +D +I++ DFG ++V+ + +GT YV+PE+L+ +
Sbjct: 153 IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSAX 212
Query: 189 LATDMWSVGVLAYVLLSSHSPFAGDNKQETFLNISQCNFSFHEDLFGHISSQAKDFIQSC 248
++D+W++G + Y L++ PF N+ F I + + F E F +A+D ++
Sbjct: 213 KSSDLWALGCIIYQLVAGLPPFRAGNEGLIFAKIIKLEYDFPEKFF----PKARDLVEKL 268
Query: 249 LVTD 252
LV D
Sbjct: 269 LVLD 272
>pdb|2QNJ|A Chain A, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
pdb|2QNJ|B Chain B, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
Length = 328
Score = 112 bits (279), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 69/235 (29%), Positives = 117/235 (49%), Gaps = 6/235 (2%)
Query: 20 SRGKFASVRKCTHKITKVEYAAKFIRKRRRSMDQMQDILHEAAVLYLAQKSERIVGLHEI 79
+G FA V+ H +T E A K I K + + +Q + E ++ + IV L E+
Sbjct: 21 GKGNFAKVKLARHILTGREVAIKIIDKTQLNPTSLQKLFREVRIMKILNHPN-IVKLFEV 79
Query: 80 YETPHEMVLVLEMVPDGELQRLVDIQDGIPEQDTRSYMKQILEALAFLHDHNITHLDLKP 139
ET + L++E GE+ + + E++ RS +QI+ A+ + H I H DLK
Sbjct: 80 IETEKTLYLIMEYASGGEVFDYLVAHGRMKEKEARSKFRQIVSAVQYCHQKRIVHRDLKA 139
Query: 140 QNILLTKDNNIKLCDFGISRVVNDVVEVKEIIGTPDYVAPEVLSYEPI-SLATDMWSVGV 198
+N+LL D NIK+ DFG S ++ G+P Y APE+ + D+WS+GV
Sbjct: 140 ENLLLDADMNIKIADFGFSNEFTVGGKLDTFCGSPPYAAPELFQGKKYDGPEVDVWSLGV 199
Query: 199 LAYVLLSSHSPFAGDNKQETFLNISQCNFSFHEDLFGHISSQAKDFIQSCLVTDP 253
+ Y L+S PF G N +E + + + + ++S+ ++ ++ LV +P
Sbjct: 200 ILYTLVSGSLPFDGQNLKELRERVLRGKYR----IPFYMSTDCENLLKRFLVLNP 250
>pdb|3TXO|A Chain A, Pkc Eta Kinase In Complex With A Naphthyridine
Length = 353
Score = 111 bits (278), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 73/226 (32%), Positives = 109/226 (48%), Gaps = 6/226 (2%)
Query: 20 SRGKFASVRKCTHKITKVEYAAKFIRKRR-RSMDQMQDILHEAAVLYLAQKSERIVGLHE 78
+G F V K T YA K ++K D ++ + E +L LA+ + L
Sbjct: 32 GKGSFGKVMLARVKETGDLYAVKVLKKDVILQDDDVECTMTEKRILSLARNHPFLTQLFC 91
Query: 79 IYETPHEMVLVLEMVPDGELQRLVDIQDGIPEQDTRSYMKQILEALAFLHDHNITHLDLK 138
++TP + V+E V G+L + E R Y +I+ AL FLHD I + DLK
Sbjct: 92 CFQTPDRLFFVMEFVNGGDLMFHIQKSRRFDEARARFYAAEIISALMFLHDKGIIYRDLK 151
Query: 139 PQNILLTKDNNIKLCDFGISR-VVNDVVEVKEIIGTPDYVAPEVLSYEPISLATDMWSVG 197
N+LL + + KL DFG+ + + + V GTPDY+APE+L A D W++G
Sbjct: 152 LDNVLLDHEGHCKLADFGMCKEGICNGVTTATFCGTPDYIAPEILQEMLYGPAVDWWAMG 211
Query: 198 VLAYVLLSSHSPFAGDNKQETFLNISQCNFSF----HEDLFGHISS 239
VL Y +L H+PF +N+ + F I + HED G + S
Sbjct: 212 VLLYEMLCGHAPFEAENEDDLFEAILNDEVVYPTWLHEDATGILKS 257
>pdb|3HRC|A Chain A, Crystal Structure Of A Mutant Of Human Pdk1 Kinase Domain
In Complex With Atp
pdb|3HRF|A Chain A, Crystal Structure Of Human Pdk1 Kinase Domain In Complex
With An Allosteric Activator Bound To The Pif-Pocket
pdb|3RCJ|A Chain A, Rapid Preparation Of Triazolyl Substituted Nh-Heterocyclic
Kinase Inhibitors Via One-Pot Sonogashira Coupling
Tms-Deprotection Cuaac Sequence
pdb|4A06|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps114 Bound To The Pif-Pocket
pdb|4AW1|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps210 Bound To The Pif-Pocket
Length = 311
Score = 111 bits (278), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 70/244 (28%), Positives = 119/244 (48%), Gaps = 23/244 (9%)
Query: 20 SRGKFASVRKCTHKITKVEYAAKFIRKRRRSMDQMQDILHEAAVLYLAQKSERI------ 73
G F++V T EYA K + KR I+ E V Y+ ++ + +
Sbjct: 41 GEGSFSTVVLARELATSREYAIKILEKRH--------IIKENKVPYVTRERDVMSRLDHP 92
Query: 74 --VGLHEIYETPHEMVLVLEMVPDGELQRLVDIQDGIPEQDTRSYMKQILEALAFLHDHN 131
V L+ ++ ++ L +GEL + + E TR Y +I+ AL +LH
Sbjct: 93 FFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKG 152
Query: 132 ITHLDLKPQNILLTKDNNIKLCDFGISRVV---NDVVEVKEIIGTPDYVAPEVLSYEPIS 188
I H DLKP+NILL +D +I++ DFG ++V+ + +GT YV+PE+L+ +
Sbjct: 153 IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSAC 212
Query: 189 LATDMWSVGVLAYVLLSSHSPFAGDNKQETFLNISQCNFSFHEDLFGHISSQAKDFIQSC 248
++D+W++G + Y L++ PF N+ F I + + F E F +A+D ++
Sbjct: 213 KSSDLWALGCIIYQLVAGLPPFRAGNEGLIFAKIIKLEYDFPEKFF----PKARDLVEKL 268
Query: 249 LVTD 252
LV D
Sbjct: 269 LVLD 272
>pdb|3NAX|A Chain A, Pdk1 In Complex With Inhibitor Mp7
Length = 311
Score = 111 bits (278), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 70/244 (28%), Positives = 119/244 (48%), Gaps = 23/244 (9%)
Query: 20 SRGKFASVRKCTHKITKVEYAAKFIRKRRRSMDQMQDILHEAAVLYLAQKSERI------ 73
G F++V T EYA K + KR I+ E V Y+ ++ + +
Sbjct: 38 GEGSFSTVVLARELATSREYAIKILEKRH--------IIKENKVPYVTRERDVMSRLDHP 89
Query: 74 --VGLHEIYETPHEMVLVLEMVPDGELQRLVDIQDGIPEQDTRSYMKQILEALAFLHDHN 131
V L+ ++ ++ L +GEL + + E TR Y +I+ AL +LH
Sbjct: 90 FFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKG 149
Query: 132 ITHLDLKPQNILLTKDNNIKLCDFGISRVV---NDVVEVKEIIGTPDYVAPEVLSYEPIS 188
I H DLKP+NILL +D +I++ DFG ++V+ + +GT YV+PE+L+ +
Sbjct: 150 IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANSFVGTAQYVSPELLTEKSAC 209
Query: 189 LATDMWSVGVLAYVLLSSHSPFAGDNKQETFLNISQCNFSFHEDLFGHISSQAKDFIQSC 248
++D+W++G + Y L++ PF N+ F I + + F E F +A+D ++
Sbjct: 210 KSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFPEKFF----PKARDLVEKL 265
Query: 249 LVTD 252
LV D
Sbjct: 266 LVLD 269
>pdb|3FE3|A Chain A, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
pdb|3FE3|B Chain B, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
Length = 328
Score = 111 bits (278), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 69/235 (29%), Positives = 116/235 (49%), Gaps = 6/235 (2%)
Query: 20 SRGKFASVRKCTHKITKVEYAAKFIRKRRRSMDQMQDILHEAAVLYLAQKSERIVGLHEI 79
+G FA V+ H +T E A K I K + + +Q + E ++ + IV L E+
Sbjct: 24 GKGNFAKVKLARHILTGREVAIKIIDKTQLNPTSLQKLFREVRIMKILNHPN-IVKLFEV 82
Query: 80 YETPHEMVLVLEMVPDGELQRLVDIQDGIPEQDTRSYMKQILEALAFLHDHNITHLDLKP 139
ET + L++E GE+ + + E++ RS +QI+ A+ + H I H DLK
Sbjct: 83 IETEKTLYLIMEYASGGEVFDYLVAHGRMKEKEARSKFRQIVSAVQYCHQKRIVHRDLKA 142
Query: 140 QNILLTKDNNIKLCDFGISRVVNDVVEVKEIIGTPDYVAPEVLSYEPI-SLATDMWSVGV 198
+N+LL D NIK+ DFG S ++ G P Y APE+ + D+WS+GV
Sbjct: 143 ENLLLDADMNIKIADFGFSNEFTVGGKLDAFCGAPPYAAPELFQGKKYDGPEVDVWSLGV 202
Query: 199 LAYVLLSSHSPFAGDNKQETFLNISQCNFSFHEDLFGHISSQAKDFIQSCLVTDP 253
+ Y L+S PF G N +E + + + + ++S+ ++ ++ LV +P
Sbjct: 203 ILYTLVSGSLPFDGQNLKELRERVLRGKYR----IPFYMSTDCENLLKRFLVLNP 253
>pdb|3IEC|A Chain A, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|B Chain B, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|C Chain C, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|D Chain D, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
Length = 319
Score = 111 bits (277), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 68/235 (28%), Positives = 116/235 (49%), Gaps = 6/235 (2%)
Query: 20 SRGKFASVRKCTHKITKVEYAAKFIRKRRRSMDQMQDILHEAAVLYLAQKSERIVGLHEI 79
+G FA V+ H +T E A K I K + + +Q + E ++ + IV L E+
Sbjct: 16 GKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLFREVRIMKVLNHPN-IVKLFEV 74
Query: 80 YETPHEMVLVLEMVPDGELQRLVDIQDGIPEQDTRSYMKQILEALAFLHDHNITHLDLKP 139
ET + LV+E GE+ + + E++ R+ +QI+ A+ + H I H DLK
Sbjct: 75 IETEKTLYLVMEYASGGEVFDYLVAHGWMKEKEARAKFRQIVSAVQYCHQKFIVHRDLKA 134
Query: 140 QNILLTKDNNIKLCDFGISRVVNDVVEVKEIIGTPDYVAPEVLSYEPI-SLATDMWSVGV 198
+N+LL D NIK+ DFG S ++ G+P Y APE+ + D+WS+GV
Sbjct: 135 ENLLLDADMNIKIADFGFSNEFTFGNKLDTFCGSPPYAAPELFQGKKYDGPEVDVWSLGV 194
Query: 199 LAYVLLSSHSPFAGDNKQETFLNISQCNFSFHEDLFGHISSQAKDFIQSCLVTDP 253
+ Y L+S PF G N +E + + + ++S+ ++ ++ L+ +P
Sbjct: 195 ILYTLVSGSLPFDGQNLKELRERVLRGKYRIP----FYMSTDCENLLKKFLILNP 245
>pdb|3NAY|A Chain A, Pdk1 In Complex With Inhibitor Mp6
pdb|3NAY|B Chain B, Pdk1 In Complex With Inhibitor Mp6
Length = 311
Score = 111 bits (277), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 70/244 (28%), Positives = 119/244 (48%), Gaps = 23/244 (9%)
Query: 20 SRGKFASVRKCTHKITKVEYAAKFIRKRRRSMDQMQDILHEAAVLYLAQKSERI------ 73
G F++V T EYA K + KR I+ E V Y+ ++ + +
Sbjct: 38 GEGSFSTVVLARELATSREYAIKILEKRH--------IIKENKVPYVTRERDVMSRLDHP 89
Query: 74 --VGLHEIYETPHEMVLVLEMVPDGELQRLVDIQDGIPEQDTRSYMKQILEALAFLHDHN 131
V L+ ++ ++ L +GEL + + E TR Y +I+ AL +LH
Sbjct: 90 FFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKG 149
Query: 132 ITHLDLKPQNILLTKDNNIKLCDFGISRVV---NDVVEVKEIIGTPDYVAPEVLSYEPIS 188
I H DLKP+NILL +D +I++ DFG ++V+ + +GT YV+PE+L+ +
Sbjct: 150 IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSAC 209
Query: 189 LATDMWSVGVLAYVLLSSHSPFAGDNKQETFLNISQCNFSFHEDLFGHISSQAKDFIQSC 248
++D+W++G + Y L++ PF N+ F I + + F E F +A+D ++
Sbjct: 210 KSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFPEKFF----PKARDLVEKL 265
Query: 249 LVTD 252
LV D
Sbjct: 266 LVLD 269
>pdb|2R7B|A Chain A, Crystal Structure Of The Phosphoinositide-Dependent
Kinase- 1 (Pdk-1)catalytic Domain Bound To A
Dibenzonaphthyridine Inhibitor
pdb|3ION|A Chain A, Pdk1 In Complex With Compound 8h
Length = 312
Score = 111 bits (277), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 70/244 (28%), Positives = 119/244 (48%), Gaps = 23/244 (9%)
Query: 20 SRGKFASVRKCTHKITKVEYAAKFIRKRRRSMDQMQDILHEAAVLYLAQKSERI------ 73
G F++V T EYA K + KR I+ E V Y+ ++ + +
Sbjct: 42 GEGSFSTVVLARELATSREYAIKILEKRH--------IIKENKVPYVTRERDVMSRLDHP 93
Query: 74 --VGLHEIYETPHEMVLVLEMVPDGELQRLVDIQDGIPEQDTRSYMKQILEALAFLHDHN 131
V L+ ++ ++ L +GEL + + E TR Y +I+ AL +LH
Sbjct: 94 FFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKG 153
Query: 132 ITHLDLKPQNILLTKDNNIKLCDFGISRVV---NDVVEVKEIIGTPDYVAPEVLSYEPIS 188
I H DLKP+NILL +D +I++ DFG ++V+ + +GT YV+PE+L+ +
Sbjct: 154 IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANSFVGTAQYVSPELLTEKSAC 213
Query: 189 LATDMWSVGVLAYVLLSSHSPFAGDNKQETFLNISQCNFSFHEDLFGHISSQAKDFIQSC 248
++D+W++G + Y L++ PF N+ F I + + F E F +A+D ++
Sbjct: 214 KSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFPEKFF----PKARDLVEKL 269
Query: 249 LVTD 252
LV D
Sbjct: 270 LVLD 273
>pdb|2XCH|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 111 bits (277), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 70/244 (28%), Positives = 119/244 (48%), Gaps = 23/244 (9%)
Query: 20 SRGKFASVRKCTHKITKVEYAAKFIRKRRRSMDQMQDILHEAAVLYLAQKSERI------ 73
G F++V T EYA K + KR I+ E V Y+ ++ + +
Sbjct: 39 GEGSFSTVVLARELATSREYAIKILEKRH--------IIKENKVPYVTRERDVMSRLDHP 90
Query: 74 --VGLHEIYETPHEMVLVLEMVPDGELQRLVDIQDGIPEQDTRSYMKQILEALAFLHDHN 131
V L+ ++ ++ L +GEL + + E TR Y +I+ AL +LH
Sbjct: 91 FFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKG 150
Query: 132 ITHLDLKPQNILLTKDNNIKLCDFGISRVV---NDVVEVKEIIGTPDYVAPEVLSYEPIS 188
I H DLKP+NILL +D +I++ DFG ++V+ + +GT YV+PE+L+ +
Sbjct: 151 IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSAC 210
Query: 189 LATDMWSVGVLAYVLLSSHSPFAGDNKQETFLNISQCNFSFHEDLFGHISSQAKDFIQSC 248
++D+W++G + Y L++ PF N+ F I + + F E F +A+D ++
Sbjct: 211 KSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFPEKFF----PKARDLVEKL 266
Query: 249 LVTD 252
LV D
Sbjct: 267 LVLD 270
>pdb|3RWP|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 111 bits (277), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 70/244 (28%), Positives = 119/244 (48%), Gaps = 23/244 (9%)
Query: 20 SRGKFASVRKCTHKITKVEYAAKFIRKRRRSMDQMQDILHEAAVLYLAQKSERI------ 73
G F++V T EYA K + KR I+ E V Y+ ++ + +
Sbjct: 41 GEGSFSTVVLARELATSREYAIKILEKRH--------IIKENKVPYVTRERDVMSRLDHP 92
Query: 74 --VGLHEIYETPHEMVLVLEMVPDGELQRLVDIQDGIPEQDTRSYMKQILEALAFLHDHN 131
V L+ ++ ++ L +GEL + + E TR Y +I+ AL +LH
Sbjct: 93 FFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKG 152
Query: 132 ITHLDLKPQNILLTKDNNIKLCDFGISRVV---NDVVEVKEIIGTPDYVAPEVLSYEPIS 188
I H DLKP+NILL +D +I++ DFG ++V+ + +GT YV+PE+L+ +
Sbjct: 153 IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSAC 212
Query: 189 LATDMWSVGVLAYVLLSSHSPFAGDNKQETFLNISQCNFSFHEDLFGHISSQAKDFIQSC 248
++D+W++G + Y L++ PF N+ F I + + F E F +A+D ++
Sbjct: 213 KSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFPEKFF----PKARDLVEKL 268
Query: 249 LVTD 252
LV D
Sbjct: 269 LVLD 272
>pdb|1UU3|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ly333531
pdb|1UU7|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-2
pdb|1UU8|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-1
pdb|1OKY|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Staurosporine
pdb|1OKZ|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ucn-01
Length = 310
Score = 111 bits (277), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 70/244 (28%), Positives = 119/244 (48%), Gaps = 23/244 (9%)
Query: 20 SRGKFASVRKCTHKITKVEYAAKFIRKRRRSMDQMQDILHEAAVLYLAQKSERI------ 73
G F++V T EYA K + KR I+ E V Y+ ++ + +
Sbjct: 39 GEGSFSTVVLARELATSREYAIKILEKRH--------IIKENKVPYVTRERDVMSRLDHP 90
Query: 74 --VGLHEIYETPHEMVLVLEMVPDGELQRLVDIQDGIPEQDTRSYMKQILEALAFLHDHN 131
V L+ ++ ++ L +GEL + + E TR Y +I+ AL +LH
Sbjct: 91 FFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKG 150
Query: 132 ITHLDLKPQNILLTKDNNIKLCDFGISRVV---NDVVEVKEIIGTPDYVAPEVLSYEPIS 188
I H DLKP+NILL +D +I++ DFG ++V+ + +GT YV+PE+L+ +
Sbjct: 151 IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSAC 210
Query: 189 LATDMWSVGVLAYVLLSSHSPFAGDNKQETFLNISQCNFSFHEDLFGHISSQAKDFIQSC 248
++D+W++G + Y L++ PF N+ F I + + F E F +A+D ++
Sbjct: 211 KSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFPEKFF----PKARDLVEKL 266
Query: 249 LVTD 252
LV D
Sbjct: 267 LVLD 270
>pdb|3NUN|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Lead
Compound
Length = 292
Score = 110 bits (276), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 70/244 (28%), Positives = 119/244 (48%), Gaps = 23/244 (9%)
Query: 20 SRGKFASVRKCTHKITKVEYAAKFIRKRRRSMDQMQDILHEAAVLYLAQKSERI------ 73
G F++V T EYA K + KR I+ E V Y+ ++ + +
Sbjct: 23 GEGSFSTVVLARELATSREYAIKILEKRH--------IIKENKVPYVTRERDVMSRLDHP 74
Query: 74 --VGLHEIYETPHEMVLVLEMVPDGELQRLVDIQDGIPEQDTRSYMKQILEALAFLHDHN 131
V L+ ++ ++ L +GEL + + E TR Y +I+ AL +LH
Sbjct: 75 FFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKG 134
Query: 132 ITHLDLKPQNILLTKDNNIKLCDFGISRVV---NDVVEVKEIIGTPDYVAPEVLSYEPIS 188
I H DLKP+NILL +D +I++ DFG ++V+ + +GT YV+PE+L+ +
Sbjct: 135 IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSAC 194
Query: 189 LATDMWSVGVLAYVLLSSHSPFAGDNKQETFLNISQCNFSFHEDLFGHISSQAKDFIQSC 248
++D+W++G + Y L++ PF N+ F I + + F E F +A+D ++
Sbjct: 195 KSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFPEKFF----PKARDLVEKL 250
Query: 249 LVTD 252
LV D
Sbjct: 251 LVLD 254
>pdb|3IOP|A Chain A, Pdk-1 In Complex With The Inhibitor Compound-8i
pdb|3QCQ|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-(3-
Amino-1h-Indazol-6-Yl)-N4-Ethyl-2,4-Pyrimidinediamine
pdb|3QCS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-[2-
Amino-6-(4-Morpholinyl)-4-Pyrimidinyl]-1h-Indazol-3-
Amine
pdb|3QCX|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-{2-
Amino-6-[(3r)-3-Methyl-4-Morpholinyl]-4-Pyrimidinyl}-1h-
Indazol-3- Amine
pdb|3QCY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 4-[2-
Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-N-
Phenyl-2- Morpholinecarboxamide
pdb|3QD0|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With (2r,5s)-
1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-6-
Methyl-N- Phenyl-3-Piperidinecarboxamide
pdb|3QD3|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1- Dimethylethyl
{(3r,6s)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-6-Methyl-3-Piperidinyl}carbamate
pdb|3QD4|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1-
Dimethylethyl{(3r,
5r)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-5-Methyl-3-Piperidinyl}carbamate
Length = 312
Score = 110 bits (276), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 70/244 (28%), Positives = 119/244 (48%), Gaps = 23/244 (9%)
Query: 20 SRGKFASVRKCTHKITKVEYAAKFIRKRRRSMDQMQDILHEAAVLYLAQKSERI------ 73
G F++V T EYA K + KR I+ E V Y+ ++ + +
Sbjct: 42 GEGSFSTVVLARELATSREYAIKILEKRH--------IIKENKVPYVTRERDVMSRLDHP 93
Query: 74 --VGLHEIYETPHEMVLVLEMVPDGELQRLVDIQDGIPEQDTRSYMKQILEALAFLHDHN 131
V L+ ++ ++ L +GEL + + E TR Y +I+ AL +LH
Sbjct: 94 FFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKG 153
Query: 132 ITHLDLKPQNILLTKDNNIKLCDFGISRVV---NDVVEVKEIIGTPDYVAPEVLSYEPIS 188
I H DLKP+NILL +D +I++ DFG ++V+ + +GT YV+PE+L+ +
Sbjct: 154 IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSAC 213
Query: 189 LATDMWSVGVLAYVLLSSHSPFAGDNKQETFLNISQCNFSFHEDLFGHISSQAKDFIQSC 248
++D+W++G + Y L++ PF N+ F I + + F E F +A+D ++
Sbjct: 214 KSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFPEKFF----PKARDLVEKL 269
Query: 249 LVTD 252
LV D
Sbjct: 270 LVLD 273
>pdb|3H9O|A Chain A, Phosphoinositide-Dependent Protein Kinase 1 (Pdk-1) In
Complex With Compound 9
Length = 311
Score = 110 bits (276), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 70/244 (28%), Positives = 119/244 (48%), Gaps = 23/244 (9%)
Query: 20 SRGKFASVRKCTHKITKVEYAAKFIRKRRRSMDQMQDILHEAAVLYLAQKSERI------ 73
G F++V T EYA K + KR I+ E V Y+ ++ + +
Sbjct: 41 GEGSFSTVVLARELATSREYAIKILEKRH--------IIKENKVPYVTRERDVMSRLDHP 92
Query: 74 --VGLHEIYETPHEMVLVLEMVPDGELQRLVDIQDGIPEQDTRSYMKQILEALAFLHDHN 131
V L+ ++ ++ L +GEL + + E TR Y +I+ AL +LH
Sbjct: 93 FFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKG 152
Query: 132 ITHLDLKPQNILLTKDNNIKLCDFGISRVV---NDVVEVKEIIGTPDYVAPEVLSYEPIS 188
I H DLKP+NILL +D +I++ DFG ++V+ + +GT YV+PE+L+ +
Sbjct: 153 IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSAC 212
Query: 189 LATDMWSVGVLAYVLLSSHSPFAGDNKQETFLNISQCNFSFHEDLFGHISSQAKDFIQSC 248
++D+W++G + Y L++ PF N+ F I + + F E F +A+D ++
Sbjct: 213 KSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFPEKFF----PKARDLVEKL 268
Query: 249 LVTD 252
LV D
Sbjct: 269 LVLD 272
>pdb|3SC1|A Chain A, Novel Isoquinolone Pdk1 Inhibitors Discovered Through
Fragment-Based Lead Discovery
pdb|3RWQ|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 110 bits (276), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 70/244 (28%), Positives = 119/244 (48%), Gaps = 23/244 (9%)
Query: 20 SRGKFASVRKCTHKITKVEYAAKFIRKRRRSMDQMQDILHEAAVLYLAQKSERI------ 73
G F++V T EYA K + KR I+ E V Y+ ++ + +
Sbjct: 41 GEGSFSTVVLARELATSREYAIKILEKRH--------IIKENKVPYVTRERDVMSRLDHP 92
Query: 74 --VGLHEIYETPHEMVLVLEMVPDGELQRLVDIQDGIPEQDTRSYMKQILEALAFLHDHN 131
V L+ ++ ++ L +GEL + + E TR Y +I+ AL +LH
Sbjct: 93 FFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKG 152
Query: 132 ITHLDLKPQNILLTKDNNIKLCDFGISRVV---NDVVEVKEIIGTPDYVAPEVLSYEPIS 188
I H DLKP+NILL +D +I++ DFG ++V+ + +GT YV+PE+L+ +
Sbjct: 153 IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSAC 212
Query: 189 LATDMWSVGVLAYVLLSSHSPFAGDNKQETFLNISQCNFSFHEDLFGHISSQAKDFIQSC 248
++D+W++G + Y L++ PF N+ F I + + F E F +A+D ++
Sbjct: 213 KSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFPEKFF----PKARDLVEKL 268
Query: 249 LVTD 252
LV D
Sbjct: 269 LVLD 272
>pdb|3NUS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment8
pdb|3NUU|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment11
pdb|3NUY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment17
Length = 286
Score = 110 bits (276), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 70/242 (28%), Positives = 119/242 (49%), Gaps = 23/242 (9%)
Query: 22 GKFASVRKCTHKITKVEYAAKFIRKRRRSMDQMQDILHEAAVLYLAQKSERI-------- 73
G F++V T EYA K + KR I+ E V Y+ ++ + +
Sbjct: 19 GSFSTVVLARELATSREYAIKILEKRH--------IIKENKVPYVTRERDVMSRLDHPFF 70
Query: 74 VGLHEIYETPHEMVLVLEMVPDGELQRLVDIQDGIPEQDTRSYMKQILEALAFLHDHNIT 133
V L+ ++ ++ L +GEL + + E TR Y +I+ AL +LH I
Sbjct: 71 VKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKGII 130
Query: 134 HLDLKPQNILLTKDNNIKLCDFGISRVV---NDVVEVKEIIGTPDYVAPEVLSYEPISLA 190
H DLKP+NILL +D +I++ DFG ++V+ + +GT YV+PE+L+ + +
Sbjct: 131 HRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSACKS 190
Query: 191 TDMWSVGVLAYVLLSSHSPFAGDNKQETFLNISQCNFSFHEDLFGHISSQAKDFIQSCLV 250
+D+W++G + Y L++ PF N+ F I + + F E F +A+D ++ LV
Sbjct: 191 SDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFPEKFF----PKARDLVEKLLV 246
Query: 251 TD 252
D
Sbjct: 247 LD 248
>pdb|1Z5M|A Chain A, Crystal Structure Of
N1-[3-[[5-bromo-2-[[3-[(1-pyrrolidinylcarbonyl)
Amino]phenyl]amino]-4-pyrimidinyl]amino]propyl]-2,2-
Dimethylpropanediamide Complexed With Human Pdk1
pdb|2PE0|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
5-Hydroxy-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-1,
3-Dihydro- Indol-2-One Complex
pdb|2PE1|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
{2-Oxo-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-2,
3-Dihydro-1h- Indol-5-Yl}-Urea {bx-517} Complex
pdb|2PE2|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
3-{5-[2-Oxo-5-Ureido-1,
2-Dihydro-Indol-(3z)-Ylidenemethyl]-1h-
Pyrrol-3-Yl}-N-(2-Piperidin-1-Yl-Ethyl)-Benzamide
Complex
Length = 286
Score = 110 bits (276), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 70/242 (28%), Positives = 119/242 (49%), Gaps = 23/242 (9%)
Query: 22 GKFASVRKCTHKITKVEYAAKFIRKRRRSMDQMQDILHEAAVLYLAQKSERI-------- 73
G F++V T EYA K + KR I+ E V Y+ ++ + +
Sbjct: 18 GSFSTVVLARELATSREYAIKILEKRH--------IIKENKVPYVTRERDVMSRLDHPFF 69
Query: 74 VGLHEIYETPHEMVLVLEMVPDGELQRLVDIQDGIPEQDTRSYMKQILEALAFLHDHNIT 133
V L+ ++ ++ L +GEL + + E TR Y +I+ AL +LH I
Sbjct: 70 VKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKGII 129
Query: 134 HLDLKPQNILLTKDNNIKLCDFGISRVV---NDVVEVKEIIGTPDYVAPEVLSYEPISLA 190
H DLKP+NILL +D +I++ DFG ++V+ + +GT YV+PE+L+ + +
Sbjct: 130 HRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSACKS 189
Query: 191 TDMWSVGVLAYVLLSSHSPFAGDNKQETFLNISQCNFSFHEDLFGHISSQAKDFIQSCLV 250
+D+W++G + Y L++ PF N+ F I + + F E F +A+D ++ LV
Sbjct: 190 SDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFPEKFF----PKARDLVEKLLV 245
Query: 251 TD 252
D
Sbjct: 246 LD 247
>pdb|2R0I|A Chain A, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
pdb|2R0I|B Chain B, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
Length = 327
Score = 110 bits (276), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 68/235 (28%), Positives = 117/235 (49%), Gaps = 6/235 (2%)
Query: 20 SRGKFASVRKCTHKITKVEYAAKFIRKRRRSMDQMQDILHEAAVLYLAQKSERIVGLHEI 79
+G FA V+ H +T E A K I K + + +Q + E ++ + IV L E+
Sbjct: 23 GKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLFREVRIMKVLNHPN-IVKLFEV 81
Query: 80 YETPHEMVLVLEMVPDGELQRLVDIQDGIPEQDTRSYMKQILEALAFLHDHNITHLDLKP 139
ET + LV+E GE+ + + E++ R+ +QI+ A+ + H I H DLK
Sbjct: 82 IETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFRQIVSAVQYCHQKFIVHRDLKA 141
Query: 140 QNILLTKDNNIKLCDFGISRVVNDVVEVKEIIGTPDYVAPEVLSYEPI-SLATDMWSVGV 198
+N+LL D NIK+ DFG S ++ G+P Y APE+ + D+WS+GV
Sbjct: 142 ENLLLDADMNIKIADFGFSNEFTFGNKLDTFCGSPPYAAPELFQGKKYDGPEVDVWSLGV 201
Query: 199 LAYVLLSSHSPFAGDNKQETFLNISQCNFSFHEDLFGHISSQAKDFIQSCLVTDP 253
+ Y L+S PF G N +E + + + + ++S+ ++ ++ L+ +P
Sbjct: 202 ILYTLVSGSLPFDGQNLKELRERVLRGKYR----IPFYMSTDCENLLKKFLILNP 252
>pdb|2BIY|A Chain A, Structure Of Pdk1-S241a Mutant Kinase Domain
Length = 310
Score = 110 bits (276), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 70/244 (28%), Positives = 119/244 (48%), Gaps = 23/244 (9%)
Query: 20 SRGKFASVRKCTHKITKVEYAAKFIRKRRRSMDQMQDILHEAAVLYLAQKSERI------ 73
G F++V T EYA K + KR I+ E V Y+ ++ + +
Sbjct: 39 GEGSFSTVVLARELATSREYAIKILEKRH--------IIKENKVPYVTRERDVMSRLDHP 90
Query: 74 --VGLHEIYETPHEMVLVLEMVPDGELQRLVDIQDGIPEQDTRSYMKQILEALAFLHDHN 131
V L+ ++ ++ L +GEL + + E TR Y +I+ AL +LH
Sbjct: 91 FFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKG 150
Query: 132 ITHLDLKPQNILLTKDNNIKLCDFGISRVV---NDVVEVKEIIGTPDYVAPEVLSYEPIS 188
I H DLKP+NILL +D +I++ DFG ++V+ + +GT YV+PE+L+ +
Sbjct: 151 IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANAFVGTAQYVSPELLTEKSAC 210
Query: 189 LATDMWSVGVLAYVLLSSHSPFAGDNKQETFLNISQCNFSFHEDLFGHISSQAKDFIQSC 248
++D+W++G + Y L++ PF N+ F I + + F E F +A+D ++
Sbjct: 211 KSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFPEKFF----PKARDLVEKL 266
Query: 249 LVTD 252
LV D
Sbjct: 267 LVLD 270
>pdb|1UU9|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-3
Length = 286
Score = 110 bits (276), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 70/242 (28%), Positives = 119/242 (49%), Gaps = 23/242 (9%)
Query: 22 GKFASVRKCTHKITKVEYAAKFIRKRRRSMDQMQDILHEAAVLYLAQKSERI-------- 73
G F++V T EYA K + KR I+ E V Y+ ++ + +
Sbjct: 20 GSFSTVVLARELATSREYAIKILEKRH--------IIKENKVPYVTRERDVMSRLDHPFF 71
Query: 74 VGLHEIYETPHEMVLVLEMVPDGELQRLVDIQDGIPEQDTRSYMKQILEALAFLHDHNIT 133
V L+ ++ ++ L +GEL + + E TR Y +I+ AL +LH I
Sbjct: 72 VKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKGII 131
Query: 134 HLDLKPQNILLTKDNNIKLCDFGISRVV---NDVVEVKEIIGTPDYVAPEVLSYEPISLA 190
H DLKP+NILL +D +I++ DFG ++V+ + +GT YV+PE+L+ + +
Sbjct: 132 HRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSACKS 191
Query: 191 TDMWSVGVLAYVLLSSHSPFAGDNKQETFLNISQCNFSFHEDLFGHISSQAKDFIQSCLV 250
+D+W++G + Y L++ PF N+ F I + + F E F +A+D ++ LV
Sbjct: 192 SDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFPEKFF----PKARDLVEKLLV 247
Query: 251 TD 252
D
Sbjct: 248 LD 249
>pdb|1H1W|A Chain A, High Resolution Crystal Structure Of The Human Pdk1
Catalytic Domain
pdb|1UVR|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-8
Length = 289
Score = 110 bits (276), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 70/242 (28%), Positives = 119/242 (49%), Gaps = 23/242 (9%)
Query: 22 GKFASVRKCTHKITKVEYAAKFIRKRRRSMDQMQDILHEAAVLYLAQKSERI-------- 73
G F++V T EYA K + KR I+ E V Y+ ++ + +
Sbjct: 21 GSFSTVVLARELATSREYAIKILEKRH--------IIKENKVPYVTRERDVMSRLDHPFF 72
Query: 74 VGLHEIYETPHEMVLVLEMVPDGELQRLVDIQDGIPEQDTRSYMKQILEALAFLHDHNIT 133
V L+ ++ ++ L +GEL + + E TR Y +I+ AL +LH I
Sbjct: 73 VKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKGII 132
Query: 134 HLDLKPQNILLTKDNNIKLCDFGISRVV---NDVVEVKEIIGTPDYVAPEVLSYEPISLA 190
H DLKP+NILL +D +I++ DFG ++V+ + +GT YV+PE+L+ + +
Sbjct: 133 HRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSACKS 192
Query: 191 TDMWSVGVLAYVLLSSHSPFAGDNKQETFLNISQCNFSFHEDLFGHISSQAKDFIQSCLV 250
+D+W++G + Y L++ PF N+ F I + + F E F +A+D ++ LV
Sbjct: 193 SDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFPEKFF----PKARDLVEKLLV 248
Query: 251 TD 252
D
Sbjct: 249 LD 250
>pdb|1ZMU|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
pdb|1ZMU|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
Length = 327
Score = 110 bits (276), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 68/235 (28%), Positives = 117/235 (49%), Gaps = 6/235 (2%)
Query: 20 SRGKFASVRKCTHKITKVEYAAKFIRKRRRSMDQMQDILHEAAVLYLAQKSERIVGLHEI 79
+G FA V+ H +T E A K I K + + +Q + E ++ + IV L E+
Sbjct: 23 GKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLFREVRIMKVLNHPN-IVKLFEV 81
Query: 80 YETPHEMVLVLEMVPDGELQRLVDIQDGIPEQDTRSYMKQILEALAFLHDHNITHLDLKP 139
ET + LV+E GE+ + + E++ R+ +QI+ A+ + H I H DLK
Sbjct: 82 IETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFRQIVSAVQYCHQKFIVHRDLKA 141
Query: 140 QNILLTKDNNIKLCDFGISRVVNDVVEVKEIIGTPDYVAPEVLSYEPI-SLATDMWSVGV 198
+N+LL D NIK+ DFG S ++ G+P Y APE+ + D+WS+GV
Sbjct: 142 ENLLLDADMNIKIADFGFSNEFTFGNKLDTFCGSPPYAAPELFQGKKYDGPEVDVWSLGV 201
Query: 199 LAYVLLSSHSPFAGDNKQETFLNISQCNFSFHEDLFGHISSQAKDFIQSCLVTDP 253
+ Y L+S PF G N +E + + + + ++S+ ++ ++ L+ +P
Sbjct: 202 ILYTLVSGSLPFDGQNLKELRERVLRGKYR----IPFYMSTDCENLLKKFLILNP 252
>pdb|3ORX|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|E Chain E, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|F Chain F, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|G Chain G, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|H Chain H, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORZ|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3OTU|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator Js30
Length = 316
Score = 110 bits (276), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 70/244 (28%), Positives = 119/244 (48%), Gaps = 23/244 (9%)
Query: 20 SRGKFASVRKCTHKITKVEYAAKFIRKRRRSMDQMQDILHEAAVLYLAQKSERI------ 73
G F++V T EYA K + KR I+ E V Y+ ++ + +
Sbjct: 46 GEGSFSTVVLARELATSREYAIKILEKRH--------IIKENKVPYVTRERDVMSRLDHP 97
Query: 74 --VGLHEIYETPHEMVLVLEMVPDGELQRLVDIQDGIPEQDTRSYMKQILEALAFLHDHN 131
V L+ ++ ++ L +GEL + + E TR Y +I+ AL +LH
Sbjct: 98 FFVKLYFCFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKG 157
Query: 132 ITHLDLKPQNILLTKDNNIKLCDFGISRVV---NDVVEVKEIIGTPDYVAPEVLSYEPIS 188
I H DLKP+NILL +D +I++ DFG ++V+ + +GT YV+PE+L+ +
Sbjct: 158 IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSAC 217
Query: 189 LATDMWSVGVLAYVLLSSHSPFAGDNKQETFLNISQCNFSFHEDLFGHISSQAKDFIQSC 248
++D+W++G + Y L++ PF N+ F I + + F E F +A+D ++
Sbjct: 218 KSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFPEKFF----PKARDLVEKL 273
Query: 249 LVTD 252
LV D
Sbjct: 274 LVLD 277
>pdb|1FOT|A Chain A, Structure Of The Unliganded Camp-Dependent Protein Kinase
Catalytic Subunit From Saccharomyces Cerevisiae
Length = 318
Score = 110 bits (275), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 53/157 (33%), Positives = 90/157 (57%), Gaps = 2/157 (1%)
Query: 73 IVGLHEIYETPHEMVLVLEMVPDGELQRLVDIQDGIPEQDTRSYMKQILEALAFLHDHNI 132
I+ + ++ ++ ++++ + GEL L+ P + Y ++ AL +LH +I
Sbjct: 68 IIRMWGTFQDAQQIFMIMDYIEGGELFSLLRKSQRFPNPVAKFYAAEVCLALEYLHSKDI 127
Query: 133 THLDLKPQNILLTKDNNIKLCDFGISRVVNDVVEVKEIIGTPDYVAPEVLSYEPISLATD 192
+ DLKP+NILL K+ +IK+ DFG ++ V DV + GTPDY+APEV+S +P + + D
Sbjct: 128 IYRDLKPENILLDKNGHIKITDFGFAKYVPDV--TYXLCGTPDYIAPEVVSTKPYNKSID 185
Query: 193 MWSVGVLAYVLLSSHSPFAGDNKQETFLNISQCNFSF 229
WS G+L Y +L+ ++PF N +T+ I F
Sbjct: 186 WWSFGILIYEMLAGYTPFYDSNTMKTYEKILNAELRF 222
>pdb|1ZMW|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
pdb|1ZMW|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
Length = 327
Score = 110 bits (275), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 68/235 (28%), Positives = 116/235 (49%), Gaps = 6/235 (2%)
Query: 20 SRGKFASVRKCTHKITKVEYAAKFIRKRRRSMDQMQDILHEAAVLYLAQKSERIVGLHEI 79
+G FA V+ H +T E A K I K + + +Q + E ++ + IV L E+
Sbjct: 23 GKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLFREVRIMKVLNHPN-IVKLFEV 81
Query: 80 YETPHEMVLVLEMVPDGELQRLVDIQDGIPEQDTRSYMKQILEALAFLHDHNITHLDLKP 139
ET + LV+E GE+ + + E++ R+ +QI+ A+ + H I H DLK
Sbjct: 82 IETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFRQIVSAVQYCHQKFIVHRDLKA 141
Query: 140 QNILLTKDNNIKLCDFGISRVVNDVVEVKEIIGTPDYVAPEVLSYEPI-SLATDMWSVGV 198
+N+LL D NIK+ DFG S ++ G P Y APE+ + D+WS+GV
Sbjct: 142 ENLLLDADMNIKIADFGFSNEFTFGNKLDAFCGAPPYAAPELFQGKKYDGPEVDVWSLGV 201
Query: 199 LAYVLLSSHSPFAGDNKQETFLNISQCNFSFHEDLFGHISSQAKDFIQSCLVTDP 253
+ Y L+S PF G N +E + + + + ++S+ ++ ++ L+ +P
Sbjct: 202 ILYTLVSGSLPFDGQNLKELRERVLRGKYR----IPFYMSTDCENLLKKFLILNP 252
>pdb|2HAK|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|C Chain C, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|D Chain D, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|E Chain E, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|F Chain F, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|G Chain G, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|H Chain H, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
Length = 328
Score = 110 bits (274), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 65/199 (32%), Positives = 101/199 (50%), Gaps = 2/199 (1%)
Query: 20 SRGKFASVRKCTHKITKVEYAAKFIRKRRRSMDQMQDILHEAAVLYLAQKSERIVGLHEI 79
+G FA V+ H +T E A K I K + + +Q + E ++ + IV L E+
Sbjct: 24 GKGNFAKVKLARHVLTGREVAVKIIDKTQLNPTSLQKLFREVRIMKILNHPN-IVKLFEV 82
Query: 80 YETPHEMVLVLEMVPDGELQRLVDIQDGIPEQDTRSYMKQILEALAFLHDHNITHLDLKP 139
ET + LV+E GE+ + + E++ R+ +QI+ A+ + H I H DLK
Sbjct: 83 IETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFRQIVSAVQYCHQKYIVHRDLKA 142
Query: 140 QNILLTKDNNIKLCDFGISRVVNDVVEVKEIIGTPDYVAPEVLSYEPI-SLATDMWSVGV 198
+N+LL D NIK+ DFG S ++ G+P Y APE+ + D+WS+GV
Sbjct: 143 ENLLLDGDMNIKIADFGFSNEFTVGNKLDTFCGSPPYAAPELFQGKKYDGPEVDVWSLGV 202
Query: 199 LAYVLLSSHSPFAGDNKQE 217
+ Y L+S PF G N +E
Sbjct: 203 ILYTLVSGSLPFDGQNLKE 221
>pdb|1ZMV|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
pdb|1ZMV|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
Length = 327
Score = 109 bits (273), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 67/235 (28%), Positives = 117/235 (49%), Gaps = 6/235 (2%)
Query: 20 SRGKFASVRKCTHKITKVEYAAKFIRKRRRSMDQMQDILHEAAVLYLAQKSERIVGLHEI 79
+G FA V+ H +T E A + I K + + +Q + E ++ + IV L E+
Sbjct: 23 GKGNFAKVKLARHILTGKEVAVRIIDKTQLNSSSLQKLFREVRIMKVLNHPN-IVKLFEV 81
Query: 80 YETPHEMVLVLEMVPDGELQRLVDIQDGIPEQDTRSYMKQILEALAFLHDHNITHLDLKP 139
ET + LV+E GE+ + + E++ R+ +QI+ A+ + H I H DLK
Sbjct: 82 IETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFRQIVSAVQYCHQKFIVHRDLKA 141
Query: 140 QNILLTKDNNIKLCDFGISRVVNDVVEVKEIIGTPDYVAPEVLSYEPI-SLATDMWSVGV 198
+N+LL D NIK+ DFG S ++ G+P Y APE+ + D+WS+GV
Sbjct: 142 ENLLLDADMNIKIADFGFSNEFTFGNKLDTFCGSPPYAAPELFQGKKYDGPEVDVWSLGV 201
Query: 199 LAYVLLSSHSPFAGDNKQETFLNISQCNFSFHEDLFGHISSQAKDFIQSCLVTDP 253
+ Y L+S PF G N +E + + + + ++S+ ++ ++ L+ +P
Sbjct: 202 ILYTLVSGSLPFDGQNLKELRERVLRGKYR----IPFYMSTDCENLLKKFLILNP 252
>pdb|3PWY|A Chain A, Crystal Structure Of An Extender (Spd28345)-Modified Human
Pdk1 Complex 2
Length = 311
Score = 109 bits (273), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 70/244 (28%), Positives = 119/244 (48%), Gaps = 23/244 (9%)
Query: 20 SRGKFASVRKCTHKITKVEYAAKFIRKRRRSMDQMQDILHEAAVLYLAQKSERI------ 73
G F++V T EYA K + KR I+ E V Y+ ++ + +
Sbjct: 41 GEGSFSTVVLARELATSREYAIKILEKRH--------IIKENKVPYVTRERDVMSRLDHP 92
Query: 74 --VGLHEIYETPHEMVLVLEMVPDGELQRLVDIQDGIPEQDTRSYMKQILEALAFLHDHN 131
V L+ ++ ++ L +G L + + E TR Y +I+ AL +LH
Sbjct: 93 FFVKLYFTFQDDEKLYFGLSYAKNGCLLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKG 152
Query: 132 ITHLDLKPQNILLTKDNNIKLCDFGISRVV---NDVVEVKEIIGTPDYVAPEVLSYEPIS 188
I H DLKP+NILL +D +I++ DFG ++V+ + +GT YV+PE+L+ + S
Sbjct: 153 IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANSFVGTAQYVSPELLTEKSAS 212
Query: 189 LATDMWSVGVLAYVLLSSHSPFAGDNKQETFLNISQCNFSFHEDLFGHISSQAKDFIQSC 248
++D+W++G + Y L++ PF N+ F I + + F E F +A+D ++
Sbjct: 213 KSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFPEKFF----PKARDLVEKL 268
Query: 249 LVTD 252
LV D
Sbjct: 269 LVLD 272
>pdb|2XCK|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 109 bits (272), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 69/244 (28%), Positives = 118/244 (48%), Gaps = 23/244 (9%)
Query: 20 SRGKFASVRKCTHKITKVEYAAKFIRKRRRSMDQMQDILHEAAVLYLAQKSERI------ 73
G F++ T EYA K + KR I+ E V Y+ ++ + +
Sbjct: 39 GEGSFSTTVLARELATSREYAIKILEKRH--------IIKENKVPYVTRERDVMSRLDHP 90
Query: 74 --VGLHEIYETPHEMVLVLEMVPDGELQRLVDIQDGIPEQDTRSYMKQILEALAFLHDHN 131
V L+ ++ ++ L +GEL + + E TR Y +I+ AL +LH
Sbjct: 91 FFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKG 150
Query: 132 ITHLDLKPQNILLTKDNNIKLCDFGISRVV---NDVVEVKEIIGTPDYVAPEVLSYEPIS 188
I H DLKP+NILL +D +I++ DFG ++V+ + +GT YV+PE+L+ +
Sbjct: 151 IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSAC 210
Query: 189 LATDMWSVGVLAYVLLSSHSPFAGDNKQETFLNISQCNFSFHEDLFGHISSQAKDFIQSC 248
++D+W++G + Y L++ PF N+ F I + + F E F +A+D ++
Sbjct: 211 KSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFPEKFF----PKARDLVEKL 266
Query: 249 LVTD 252
LV D
Sbjct: 267 LVLD 270
>pdb|2V55|A Chain A, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe
Complex Structure
pdb|2V55|C Chain C, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe
Complex Structure
Length = 406
Score = 108 bits (270), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 74/239 (30%), Positives = 114/239 (47%), Gaps = 11/239 (4%)
Query: 20 SRGKFASVRKCTHKITKVEYAAKFIRKRRRSMDQMQDILHEAAVLYLAQKSERIVGLHEI 79
RG F V+ HK T+ YA K + K E + S +V L
Sbjct: 83 GRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQLFYA 142
Query: 80 YETPHEMVLVLEMVPDGELQRLVDIQDGIPEQDTRSYMKQILEALAFLHDHNITHLDLKP 139
++ + +V+E +P G+L L+ D +PE+ R Y +++ AL +H H D+KP
Sbjct: 143 FQDDRYLYMVMEYMPGGDLVNLMSNYD-VPEKWARFYTAEVVLALDAIHSMGFIHRDVKP 201
Query: 140 QNILLTKDNNIKLCDFGISRVVND--VVEVKEIIGTPDYVAPEVLSYEP----ISLATDM 193
N+LL K ++KL DFG +N +V +GTPDY++PEVL + D
Sbjct: 202 DNMLLDKSGHLKLADFGTCMKMNKEGMVRCDTAVGTPDYISPEVLKSQGGDGYYGRECDW 261
Query: 194 WSVGVLAYVLLSSHSPFAGDNKQETFLNI--SQCNFSFHEDLFGHISSQAKDFIQSCLV 250
WSVGV Y +L +PF D+ T+ I + + +F +D IS +AK+ I + L
Sbjct: 262 WSVGVFLYEMLVGDTPFYADSLVGTYSKIMNHKNSLTFPDD--NDISKEAKNLICAFLT 318
>pdb|2ESM|A Chain A, Crystal Structure Of Rock 1 Bound To Fasudil
pdb|2ESM|B Chain B, Crystal Structure Of Rock 1 Bound To Fasudil
pdb|2ETK|A Chain A, Crystal Structure Of Rock 1 Bound To Hydroxyfasudil
pdb|2ETK|B Chain B, Crystal Structure Of Rock 1 Bound To Hydroxyfasudil
pdb|2ETR|A Chain A, Crystal Structure Of Rock I Bound To Y-27632
pdb|2ETR|B Chain B, Crystal Structure Of Rock I Bound To Y-27632
pdb|3D9V|A Chain A, Crystal Structure Of Rock I Bound To H-1152p A Di-
Methylated Variant Of Fasudil
pdb|3D9V|B Chain B, Crystal Structure Of Rock I Bound To H-1152p A Di-
Methylated Variant Of Fasudil
pdb|3NCZ|A Chain A, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|B Chain B, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|C Chain C, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|D Chain D, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NDM|A Chain A, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|B Chain B, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|C Chain C, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|D Chain D, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
Length = 415
Score = 108 bits (270), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 74/239 (30%), Positives = 114/239 (47%), Gaps = 11/239 (4%)
Query: 20 SRGKFASVRKCTHKITKVEYAAKFIRKRRRSMDQMQDILHEAAVLYLAQKSERIVGLHEI 79
RG F V+ HK T+ YA K + K E + S +V L
Sbjct: 83 GRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQLFYA 142
Query: 80 YETPHEMVLVLEMVPDGELQRLVDIQDGIPEQDTRSYMKQILEALAFLHDHNITHLDLKP 139
++ + +V+E +P G+L L+ D +PE+ R Y +++ AL +H H D+KP
Sbjct: 143 FQDDRYLYMVMEYMPGGDLVNLMSNYD-VPEKWARFYTAEVVLALDAIHSMGFIHRDVKP 201
Query: 140 QNILLTKDNNIKLCDFGISRVVN--DVVEVKEIIGTPDYVAPEVLSYEP----ISLATDM 193
N+LL K ++KL DFG +N +V +GTPDY++PEVL + D
Sbjct: 202 DNMLLDKSGHLKLADFGTCMKMNKEGMVRCDTAVGTPDYISPEVLKSQGGDGYYGRECDW 261
Query: 194 WSVGVLAYVLLSSHSPFAGDNKQETFLNI--SQCNFSFHEDLFGHISSQAKDFIQSCLV 250
WSVGV Y +L +PF D+ T+ I + + +F +D IS +AK+ I + L
Sbjct: 262 WSVGVFLYEMLVGDTPFYADSLVGTYSKIMNHKNSLTFPDD--NDISKEAKNLICAFLT 318
>pdb|3V8S|A Chain A, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|B Chain B, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|C Chain C, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|D Chain D, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3TV7|A Chain A, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|B Chain B, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|C Chain C, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|D Chain D, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TWJ|A Chain A, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|B Chain B, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|C Chain C, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|D Chain D, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
Length = 410
Score = 108 bits (270), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 74/239 (30%), Positives = 114/239 (47%), Gaps = 11/239 (4%)
Query: 20 SRGKFASVRKCTHKITKVEYAAKFIRKRRRSMDQMQDILHEAAVLYLAQKSERIVGLHEI 79
RG F V+ HK T+ YA K + K E + S +V L
Sbjct: 78 GRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQLFYA 137
Query: 80 YETPHEMVLVLEMVPDGELQRLVDIQDGIPEQDTRSYMKQILEALAFLHDHNITHLDLKP 139
++ + +V+E +P G+L L+ D +PE+ R Y +++ AL +H H D+KP
Sbjct: 138 FQDDRYLYMVMEYMPGGDLVNLMSNYD-VPEKWARFYTAEVVLALDAIHSMGFIHRDVKP 196
Query: 140 QNILLTKDNNIKLCDFGISRVVND--VVEVKEIIGTPDYVAPEVLSYEP----ISLATDM 193
N+LL K ++KL DFG +N +V +GTPDY++PEVL + D
Sbjct: 197 DNMLLDKSGHLKLADFGTCMKMNKEGMVRCDTAVGTPDYISPEVLKSQGGDGYYGRECDW 256
Query: 194 WSVGVLAYVLLSSHSPFAGDNKQETFLNI--SQCNFSFHEDLFGHISSQAKDFIQSCLV 250
WSVGV Y +L +PF D+ T+ I + + +F +D IS +AK+ I + L
Sbjct: 257 WSVGVFLYEMLVGDTPFYADSLVGTYSKIMNHKNSLTFPDD--NDISKEAKNLICAFLT 313
>pdb|3QC4|A Chain A, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
pdb|3QC4|B Chain B, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
Length = 314
Score = 108 bits (269), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 69/244 (28%), Positives = 118/244 (48%), Gaps = 23/244 (9%)
Query: 20 SRGKFASVRKCTHKITKVEYAAKFIRKRRRSMDQMQDILHEAAVLYLAQKSERI------ 73
G F++V T EYA K + KR I+ E V Y+ ++ + +
Sbjct: 44 GEGSFSTVVLARELATSREYAIKILEKRH--------IIKENKVPYVTRERDVMSRLDHP 95
Query: 74 --VGLHEIYETPHEMVLVLEMVPDGELQRLVDIQDGIPEQDTRSYMKQILEALAFLHDHN 131
V L+ ++ ++ L +GEL + + E TR Y +I+ AL +LH
Sbjct: 96 FFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKG 155
Query: 132 ITHLDLKPQNILLTKDNNIKLCDFGISRVV---NDVVEVKEIIGTPDYVAPEVLSYEPIS 188
I H DLKP+NILL +D +I++ DFG ++V+ + +GT YV+PE+L+ +
Sbjct: 156 IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSAC 215
Query: 189 LATDMWSVGVLAYVLLSSHSPFAGDNKQETFLNISQCNFSFHEDLFGHISSQAKDFIQSC 248
++D+W++G + Y L++ PF N+ F I + + F F +A+D ++
Sbjct: 216 KSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFPAAFF----PKARDLVEKL 271
Query: 249 LVTD 252
LV D
Sbjct: 272 LVLD 275
>pdb|3A62|A Chain A, Crystal Structure Of Phosphorylated P70s6k1
Length = 327
Score = 107 bits (268), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 74/232 (31%), Positives = 123/232 (53%), Gaps = 10/232 (4%)
Query: 22 GKFASVRKCTHKITKVEYAAKFIRKRRRSMDQMQDILHEAAVLYLAQ--KSERIVGLHEI 79
GK VRK T T +A K ++K + +D H A + + K IV L
Sbjct: 31 GKVFQVRKVTGANTGKIFAMKVLKKAM-IVRNAKDTAHTKAERNILEEVKHPFIVDLIYA 89
Query: 80 YETPHEMVLVLEMVPDGELQRLVDIQDGIPEQDTRS-YMKQILEALAFLHDHNITHLDLK 138
++T ++ L+LE + GEL ++ ++GI +DT Y+ +I AL LH I + DLK
Sbjct: 90 FQTGGKLYLILEYLSGGELFMQLE-REGIFMEDTACFYLAEISMALGHLHQKGIIYRDLK 148
Query: 139 PQNILLTKDNNIKLCDFGISR-VVNDVVEVKEIIGTPDYVAPEVLSYEPISLATDMWSVG 197
P+NI+L ++KL DFG+ + ++D GT +Y+APE+L + A D WS+G
Sbjct: 149 PENIMLNHQGHVKLTDFGLCKESIHDGTVTHXFCGTIEYMAPEILMRSGHNRAVDWWSLG 208
Query: 198 VLAYVLLSSHSPFAGDNKQETFLNISQCNFSFHEDLFGHISSQAKDFIQSCL 249
L Y +L+ PF G+N+++T I +C +L +++ +A+D ++ L
Sbjct: 209 ALMYDMLTGAPPFTGENRKKTIDKILKCKL----NLPPYLTQEARDLLKKLL 256
>pdb|3ZH8|A Chain A, A Novel Small Molecule Apkc Inhibitor
pdb|3ZH8|B Chain B, A Novel Small Molecule Apkc Inhibitor
pdb|3ZH8|C Chain C, A Novel Small Molecule Apkc Inhibitor
Length = 349
Score = 107 bits (268), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 64/193 (33%), Positives = 100/193 (51%), Gaps = 2/193 (1%)
Query: 20 SRGKFASVRKCTHKITKVEYAAKFIRKRRRSMDQMQDILH-EAAVLYLAQKSERIVGLHE 78
RG +A V K T YA K ++K + D+ D + E V A +VGLH
Sbjct: 14 GRGSYAKVLLVRLKKTDRIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLHS 73
Query: 79 IYETPHEMVLVLEMVPDGELQRLVDIQDGIPEQDTRSYMKQILEALAFLHDHNITHLDLK 138
++T + V+E V G+L + Q +PE+ R Y +I AL +LH+ I + DLK
Sbjct: 74 CFQTESRLFFVIEYVNGGDLMFHMQRQRKLPEEHARFYSAEISLALNYLHERGIIYRDLK 133
Query: 139 PQNILLTKDNNIKLCDFGISR-VVNDVVEVKEIIGTPDYVAPEVLSYEPISLATDMWSVG 197
N+LL + +IKL D+G+ + + GTP+Y+APE+L E + D W++G
Sbjct: 134 LDNVLLDSEGHIKLTDYGMCKEGLRPGDTTSXFCGTPNYIAPEILRGEDYGFSVDWWALG 193
Query: 198 VLAYVLLSSHSPF 210
VL + +++ SPF
Sbjct: 194 VLMFEMMAGRSPF 206
>pdb|1ZRZ|A Chain A, Crystal Structure Of The Catalytic Domain Of Atypical
Protein Kinase C-Iota
Length = 364
Score = 107 bits (268), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 64/193 (33%), Positives = 100/193 (51%), Gaps = 2/193 (1%)
Query: 20 SRGKFASVRKCTHKITKVEYAAKFIRKRRRSMDQMQDILH-EAAVLYLAQKSERIVGLHE 78
RG +A V K T YA K ++K + D+ D + E V A +VGLH
Sbjct: 29 GRGSYAKVLLVRLKKTDRIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLHS 88
Query: 79 IYETPHEMVLVLEMVPDGELQRLVDIQDGIPEQDTRSYMKQILEALAFLHDHNITHLDLK 138
++T + V+E V G+L + Q +PE+ R Y +I AL +LH+ I + DLK
Sbjct: 89 CFQTESRLFFVIEYVNGGDLMFHMQRQRKLPEEHARFYSAEISLALNYLHERGIIYRDLK 148
Query: 139 PQNILLTKDNNIKLCDFGISR-VVNDVVEVKEIIGTPDYVAPEVLSYEPISLATDMWSVG 197
N+LL + +IKL D+G+ + + GTP+Y+APE+L E + D W++G
Sbjct: 149 LDNVLLDSEGHIKLTDYGMCKEGLRPGDTTSXFCGTPNYIAPEILRGEDYGFSVDWWALG 208
Query: 198 VLAYVLLSSHSPF 210
VL + +++ SPF
Sbjct: 209 VLMFEMMAGRSPF 221
>pdb|3A60|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A60|B Chain B, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A61|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form Ii)
Length = 327
Score = 107 bits (268), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 74/232 (31%), Positives = 123/232 (53%), Gaps = 10/232 (4%)
Query: 22 GKFASVRKCTHKITKVEYAAKFIRKRRRSMDQMQDILHEAAVLYLAQ--KSERIVGLHEI 79
GK VRK T T +A K ++K + +D H A + + K IV L
Sbjct: 31 GKVFQVRKVTGANTGKIFAMKVLKKAM-IVRNAKDTAHTKAERNILEEVKHPFIVDLIYA 89
Query: 80 YETPHEMVLVLEMVPDGELQRLVDIQDGIPEQDTRS-YMKQILEALAFLHDHNITHLDLK 138
++T ++ L+LE + GEL ++ ++GI +DT Y+ +I AL LH I + DLK
Sbjct: 90 FQTGGKLYLILEYLSGGELFMQLE-REGIFMEDTACFYLAEISMALGHLHQKGIIYRDLK 148
Query: 139 PQNILLTKDNNIKLCDFGISR-VVNDVVEVKEIIGTPDYVAPEVLSYEPISLATDMWSVG 197
P+NI+L ++KL DFG+ + ++D GT +Y+APE+L + A D WS+G
Sbjct: 149 PENIMLNHQGHVKLTDFGLCKESIHDGTVTHTFCGTIEYMAPEILMRSGHNRAVDWWSLG 208
Query: 198 VLAYVLLSSHSPFAGDNKQETFLNISQCNFSFHEDLFGHISSQAKDFIQSCL 249
L Y +L+ PF G+N+++T I +C +L +++ +A+D ++ L
Sbjct: 209 ALMYDMLTGAPPFTGENRKKTIDKILKCKL----NLPPYLTQEARDLLKKLL 256
>pdb|3A8W|A Chain A, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8W|B Chain B, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8X|A Chain A, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8X|B Chain B, Crystal Structure Of Pkciota Kinase Domain
Length = 345
Score = 107 bits (268), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 64/193 (33%), Positives = 100/193 (51%), Gaps = 2/193 (1%)
Query: 20 SRGKFASVRKCTHKITKVEYAAKFIRKRRRSMDQMQDILH-EAAVLYLAQKSERIVGLHE 78
RG +A V K T YA K ++K + D+ D + E V A +VGLH
Sbjct: 18 GRGSYAKVLLVRLKKTDRIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLHS 77
Query: 79 IYETPHEMVLVLEMVPDGELQRLVDIQDGIPEQDTRSYMKQILEALAFLHDHNITHLDLK 138
++T + V+E V G+L + Q +PE+ R Y +I AL +LH+ I + DLK
Sbjct: 78 CFQTESRLFFVIEYVNGGDLMFHMQRQRKLPEEHARFYSAEISLALNYLHERGIIYRDLK 137
Query: 139 PQNILLTKDNNIKLCDFGISR-VVNDVVEVKEIIGTPDYVAPEVLSYEPISLATDMWSVG 197
N+LL + +IKL D+G+ + + GTP+Y+APE+L E + D W++G
Sbjct: 138 LDNVLLDSEGHIKLTDYGMCKEGLRPGDTTSXFCGTPNYIAPEILRGEDYGFSVDWWALG 197
Query: 198 VLAYVLLSSHSPF 210
VL + +++ SPF
Sbjct: 198 VLMFEMMAGRSPF 210
>pdb|2JED|A Chain A, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution.
pdb|2JED|B Chain B, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution
Length = 352
Score = 107 bits (267), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 75/239 (31%), Positives = 117/239 (48%), Gaps = 8/239 (3%)
Query: 18 MPSRGKFASVRKCTHKITKVEYAAKFIRKRRRSMDQ-MQDILHEAAVLYLAQKSERIVGL 76
M +G F V K T +A K ++K MD ++ + E VL LA + + +
Sbjct: 25 MLGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWEHPFLTHM 84
Query: 77 HEIYETPHEMVLVLEMVPDGELQRLVDIQDGIPEQDTRSYMKQILEALAFLHDHNITHLD 136
++T + V+E + G+L + Y +I+ L FLH I + D
Sbjct: 85 FCTFQTKENLFFVMEYLNGGDLMYHIQSCHKFDLSRATFYAAEIILGLQFLHSKGIVYRD 144
Query: 137 LKPQNILLTKDNNIKLCDFGISR--VVNDVVEVKEIIGTPDYVAPEVLSYEPISLATDMW 194
LK NILL KD +IK+ DFG+ + ++ D + E GTPDY+APE+L + + + D W
Sbjct: 145 LKLDNILLDKDGHIKIADFGMCKENMLGDA-KTNEFCGTPDYIAPEILLGQKYNHSVDWW 203
Query: 195 SVGVLAYVLLSSHSPFAGDNKQETFLNISQCNFSFHEDLFGHISSQAKDFIQSCLVTDP 253
S GVL Y +L SPF G +++E F +I N F+ + +AKD + V +P
Sbjct: 204 SFGVLLYEMLIGQSPFHGQDEEELFHSIRMDN-PFYPRW---LEKEAKDLLVKLFVREP 258
>pdb|1Y8G|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
pdb|1Y8G|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
Length = 327
Score = 107 bits (266), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 65/199 (32%), Positives = 97/199 (48%), Gaps = 2/199 (1%)
Query: 20 SRGKFASVRKCTHKITKVEYAAKFIRKRRRSMDQMQDILHEAAVLYLAQKSERIVGLHEI 79
+G FA V+ H +T E A K I K + + +Q + E + + IV L E+
Sbjct: 23 GKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLFREVRIXKVLNHPN-IVKLFEV 81
Query: 80 YETPHEMVLVLEMVPDGELQRLVDIQDGIPEQDTRSYMKQILEALAFLHDHNITHLDLKP 139
ET + LV E GE+ + E++ R+ +QI+ A+ + H I H DLK
Sbjct: 82 IETEKTLYLVXEYASGGEVFDYLVAHGRXKEKEARAKFRQIVSAVQYCHQKFIVHRDLKA 141
Query: 140 QNILLTKDNNIKLCDFGISRVVNDVVEVKEIIGTPDYVAPEVLSYEPI-SLATDMWSVGV 198
+N+LL D NIK+ DFG S ++ G P Y APE+ + D+WS+GV
Sbjct: 142 ENLLLDADXNIKIADFGFSNEFTFGNKLDAFCGAPPYAAPELFQGKKYDGPEVDVWSLGV 201
Query: 199 LAYVLLSSHSPFAGDNKQE 217
+ Y L+S PF G N +E
Sbjct: 202 ILYTLVSGSLPFDGQNLKE 220
>pdb|4DC2|A Chain A, Structure Of Pkc In Complex With A Substrate Peptide From
Par-3
Length = 396
Score = 107 bits (266), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 63/193 (32%), Positives = 100/193 (51%), Gaps = 2/193 (1%)
Query: 20 SRGKFASVRKCTHKITKVEYAAKFIRKRRRSMDQMQDILH-EAAVLYLAQKSERIVGLHE 78
RG +A V K T YA + ++K + D+ D + E V A +VGLH
Sbjct: 61 GRGSYAKVLLVRLKKTDRIYAMRVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLHS 120
Query: 79 IYETPHEMVLVLEMVPDGELQRLVDIQDGIPEQDTRSYMKQILEALAFLHDHNITHLDLK 138
++T + V+E V G+L + Q +PE+ R Y +I AL +LH+ I + DLK
Sbjct: 121 CFQTESRLFFVIEYVNGGDLMFHMQRQRKLPEEHARFYSAEISLALNYLHERGIIYRDLK 180
Query: 139 PQNILLTKDNNIKLCDFGISR-VVNDVVEVKEIIGTPDYVAPEVLSYEPISLATDMWSVG 197
N+LL + +IKL D+G+ + + GTP+Y+APE+L E + D W++G
Sbjct: 181 LDNVLLDSEGHIKLTDYGMCKEGLRPGDTTSTFCGTPNYIAPEILRGEDYGFSVDWWALG 240
Query: 198 VLAYVLLSSHSPF 210
VL + +++ SPF
Sbjct: 241 VLMFEMMAGRSPF 253
>pdb|2YCF|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1531
Length = 322
Score = 106 bits (265), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 59/173 (34%), Positives = 101/173 (58%), Gaps = 7/173 (4%)
Query: 88 LVLEMVPDGELQRLVDIQDGIPEQDTRSYMKQILEALAFLHDHNITHLDLKPQNILLT-- 145
+VLE++ GEL V + E + Y Q+L A+ +LH++ I H DLKP+N+LL+
Sbjct: 91 IVLELMEGGELFDKVVGNKRLKEATCKLYFYQMLLAVQYLHENGIIHRDLKPENVLLSSQ 150
Query: 146 -KDNNIKLCDFGISRVVNDVVEVKEIIGTPDYVAPEVL---SYEPISLATDMWSVGVLAY 201
+D IK+ DFG S+++ + ++ + GTP Y+APEVL + A D WS+GV+ +
Sbjct: 151 EEDCLIKITDFGHSKILGETSLMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILF 210
Query: 202 VLLSSHSPFAGDNKQETFLN-ISQCNFSFHEDLFGHISSQAKDFIQSCLVTDP 253
+ LS + PF+ Q + + I+ ++F +++ +S +A D ++ LV DP
Sbjct: 211 ICLSGYPPFSEHRTQVSLKDQITSGKYNFIPEVWAEVSEKALDLVKKLLVVDP 263
>pdb|2W0J|A Chain A, Crystal Structure Of Chk2 In Complex With Nsc 109555, A
Specific Inhibitor
pdb|2W7X|A Chain A, Cellular Inhibition Of Checkpoint Kinase 2 And
Potentiation Of Cytotoxic Drugs By Novel Chk2 Inhibitor
Pv1019
pdb|2YIQ|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1322
pdb|2YIR|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1352
pdb|2YIT|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Pv1162, A Novel Inhibitor
pdb|2YCQ|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1115
pdb|2YCS|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Pv788
Length = 323
Score = 106 bits (265), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 59/173 (34%), Positives = 101/173 (58%), Gaps = 7/173 (4%)
Query: 88 LVLEMVPDGELQRLVDIQDGIPEQDTRSYMKQILEALAFLHDHNITHLDLKPQNILLT-- 145
+VLE++ GEL V + E + Y Q+L A+ +LH++ I H DLKP+N+LL+
Sbjct: 91 IVLELMEGGELFDKVVGNKRLKEATCKLYFYQMLLAVQYLHENGIIHRDLKPENVLLSSQ 150
Query: 146 -KDNNIKLCDFGISRVVNDVVEVKEIIGTPDYVAPEVL---SYEPISLATDMWSVGVLAY 201
+D IK+ DFG S+++ + ++ + GTP Y+APEVL + A D WS+GV+ +
Sbjct: 151 EEDCLIKITDFGHSKILGETSLMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILF 210
Query: 202 VLLSSHSPFAGDNKQETFLN-ISQCNFSFHEDLFGHISSQAKDFIQSCLVTDP 253
+ LS + PF+ Q + + I+ ++F +++ +S +A D ++ LV DP
Sbjct: 211 ICLSGYPPFSEHRTQVSLKDQITSGKYNFIPEVWAEVSEKALDLVKKLLVVDP 263
>pdb|2YCR|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv976
Length = 323
Score = 106 bits (265), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 59/173 (34%), Positives = 101/173 (58%), Gaps = 7/173 (4%)
Query: 88 LVLEMVPDGELQRLVDIQDGIPEQDTRSYMKQILEALAFLHDHNITHLDLKPQNILLT-- 145
+VLE++ GEL V + E + Y Q+L A+ +LH++ I H DLKP+N+LL+
Sbjct: 91 IVLELMEGGELFDKVVGNKRLKEATCKLYFYQMLLAVQYLHENGIIHRDLKPENVLLSSQ 150
Query: 146 -KDNNIKLCDFGISRVVNDVVEVKEIIGTPDYVAPEVL---SYEPISLATDMWSVGVLAY 201
+D IK+ DFG S+++ + ++ + GTP Y+APEVL + A D WS+GV+ +
Sbjct: 151 EEDCLIKITDFGHSKILGETSLMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILF 210
Query: 202 VLLSSHSPFAGDNKQETFLN-ISQCNFSFHEDLFGHISSQAKDFIQSCLVTDP 253
+ LS + PF+ Q + + I+ ++F +++ +S +A D ++ LV DP
Sbjct: 211 ICLSGYPPFSEHRTQVSLKDQITSGKYNFIPEVWAEVSEKALDLVKKLLVVDP 263
>pdb|2CN5|A Chain A, Crystal Structure Of Human Chk2 In Complex With Adp
pdb|2CN8|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Debromohymenialdisine
pdb|2WTC|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTD|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTI|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTJ|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2XBJ|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2XM8|A Chain A, Co-Crystal Structure Of A Small Molecule Inhibitor Bound
To The Kinase Domain Of Chk2
pdb|2XM9|A Chain A, Structure Of A Small Molecule Inhibitor With The Kinase
Domain Of Chk2
pdb|4A9R|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9S|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9T|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9U|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
Length = 329
Score = 106 bits (264), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 59/173 (34%), Positives = 101/173 (58%), Gaps = 7/173 (4%)
Query: 88 LVLEMVPDGELQRLVDIQDGIPEQDTRSYMKQILEALAFLHDHNITHLDLKPQNILLT-- 145
+VLE++ GEL V + E + Y Q+L A+ +LH++ I H DLKP+N+LL+
Sbjct: 97 IVLELMEGGELFDKVVGNKRLKEATCKLYFYQMLLAVQYLHENGIIHRDLKPENVLLSSQ 156
Query: 146 -KDNNIKLCDFGISRVVNDVVEVKEIIGTPDYVAPEVL---SYEPISLATDMWSVGVLAY 201
+D IK+ DFG S+++ + ++ + GTP Y+APEVL + A D WS+GV+ +
Sbjct: 157 EEDCLIKITDFGHSKILGETSLMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILF 216
Query: 202 VLLSSHSPFAGDNKQETFLN-ISQCNFSFHEDLFGHISSQAKDFIQSCLVTDP 253
+ LS + PF+ Q + + I+ ++F +++ +S +A D ++ LV DP
Sbjct: 217 ICLSGYPPFSEHRTQVSLKDQITSGKYNFIPEVWAEVSEKALDLVKKLLVVDP 269
>pdb|2XK9|A Chain A, Structural Analysis Of Checkpoint Kinase 2 (Chk2) In
Complex With Inhibitor Pv1533
Length = 322
Score = 106 bits (264), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 59/173 (34%), Positives = 101/173 (58%), Gaps = 7/173 (4%)
Query: 88 LVLEMVPDGELQRLVDIQDGIPEQDTRSYMKQILEALAFLHDHNITHLDLKPQNILLT-- 145
+VLE++ GEL V + E + Y Q+L A+ +LH++ I H DLKP+N+LL+
Sbjct: 90 IVLELMEGGELFDKVVGNKRLKEATCKLYFYQMLLAVQYLHENGIIHRDLKPENVLLSSQ 149
Query: 146 -KDNNIKLCDFGISRVVNDVVEVKEIIGTPDYVAPEVL---SYEPISLATDMWSVGVLAY 201
+D IK+ DFG S+++ + ++ + GTP Y+APEVL + A D WS+GV+ +
Sbjct: 150 EEDCLIKITDFGHSKILGETSLMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILF 209
Query: 202 VLLSSHSPFAGDNKQETFLN-ISQCNFSFHEDLFGHISSQAKDFIQSCLVTDP 253
+ LS + PF+ Q + + I+ ++F +++ +S +A D ++ LV DP
Sbjct: 210 ICLSGYPPFSEHRTQVSLKDQITSGKYNFIPEVWAEVSEKALDLVKKLLVVDP 262
>pdb|4APC|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4APC|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4B9D|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor.
pdb|4B9D|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor
Length = 350
Score = 105 bits (263), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 64/193 (33%), Positives = 103/193 (53%), Gaps = 4/193 (2%)
Query: 38 EYAAKFIRKRRRSMDQMQDILHEAAVLYLAQKSERIVGLHEIYETPHEMVLVLEMVPDGE 97
+Y K I R S + ++ E AVL K IV E +E + +V++ G+
Sbjct: 51 QYVIKEINISRMSSKEREESRREVAVL-ANMKHPNIVQYRESFEENGSLYIVMDYCEGGD 109
Query: 98 LQRLVDIQDGIPEQDTR--SYMKQILEALAFLHDHNITHLDLKPQNILLTKDNNIKLCDF 155
L + ++ Q G+ Q+ + + QI AL +HD I H D+K QNI LTKD ++L DF
Sbjct: 110 LFKRINAQKGVLFQEDQILDWFVQICLALKHVHDRKILHRDIKSQNIFLTKDGTVQLGDF 169
Query: 156 GISRVVNDVVEV-KEIIGTPDYVAPEVLSYEPISLATDMWSVGVLAYVLLSSHSPFAGDN 214
GI+RV+N VE+ + IGTP Y++PE+ +P + +D+W++G + Y L + F +
Sbjct: 170 GIARVLNSTVELARACIGTPYYLSPEICENKPYNNKSDIWALGCVLYELCTLKHAFEAGS 229
Query: 215 KQETFLNISQCNF 227
+ L I +F
Sbjct: 230 MKNLVLKIISGSF 242
>pdb|3I6W|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|B Chain B, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|C Chain C, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|D Chain D, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|E Chain E, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|F Chain F, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|G Chain G, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|H Chain H, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
Length = 443
Score = 105 bits (263), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 59/173 (34%), Positives = 101/173 (58%), Gaps = 7/173 (4%)
Query: 88 LVLEMVPDGELQRLVDIQDGIPEQDTRSYMKQILEALAFLHDHNITHLDLKPQNILLT-- 145
+VLE++ GEL V + E + Y Q+L A+ +LH++ I H DLKP+N+LL+
Sbjct: 230 IVLELMEGGELFDKVVGNKRLKEATCKLYFYQMLLAVQYLHENGIIHRDLKPENVLLSSQ 289
Query: 146 -KDNNIKLCDFGISRVVNDVVEVKEIIGTPDYVAPEVL---SYEPISLATDMWSVGVLAY 201
+D IK+ DFG S+++ + ++ + GTP Y+APEVL + A D WS+GV+ +
Sbjct: 290 EEDCLIKITDFGHSKILGETSLMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILF 349
Query: 202 VLLSSHSPFAGDNKQETFLN-ISQCNFSFHEDLFGHISSQAKDFIQSCLVTDP 253
+ LS + PF+ Q + + I+ ++F +++ +S +A D ++ LV DP
Sbjct: 350 ICLSGYPPFSEHRTQVSLKDQITSGKYNFIPEVWAEVSEKALDLVKKLLVVDP 402
>pdb|3I6U|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6U|B Chain B, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
Length = 419
Score = 105 bits (263), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 59/173 (34%), Positives = 101/173 (58%), Gaps = 7/173 (4%)
Query: 88 LVLEMVPDGELQRLVDIQDGIPEQDTRSYMKQILEALAFLHDHNITHLDLKPQNILLT-- 145
+VLE++ GEL V + E + Y Q+L A+ +LH++ I H DLKP+N+LL+
Sbjct: 216 IVLELMEGGELFDKVVGNKRLKEATCKLYFYQMLLAVQYLHENGIIHRDLKPENVLLSSQ 275
Query: 146 -KDNNIKLCDFGISRVVNDVVEVKEIIGTPDYVAPEVL---SYEPISLATDMWSVGVLAY 201
+D IK+ DFG S+++ + ++ + GTP Y+APEVL + A D WS+GV+ +
Sbjct: 276 EEDCLIKITDFGHSKILGETSLMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILF 335
Query: 202 VLLSSHSPFAGDNKQETFLN-ISQCNFSFHEDLFGHISSQAKDFIQSCLVTDP 253
+ LS + PF+ Q + + I+ ++F +++ +S +A D ++ LV DP
Sbjct: 336 ICLSGYPPFSEHRTQVSLKDQITSGKYNFIPEVWAEVSEKALDLVKKLLVVDP 388
>pdb|1XJD|A Chain A, Crystal Structure Of Pkc-Theta Complexed With
Staurosporine At 2a Resolution
Length = 345
Score = 105 bits (262), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 74/239 (30%), Positives = 116/239 (48%), Gaps = 8/239 (3%)
Query: 18 MPSRGKFASVRKCTHKITKVEYAAKFIRKRRRSMDQ-MQDILHEAAVLYLAQKSERIVGL 76
M +G F V K T +A K ++K MD ++ + E VL LA + + +
Sbjct: 24 MLGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWEHPFLTHM 83
Query: 77 HEIYETPHEMVLVLEMVPDGELQRLVDIQDGIPEQDTRSYMKQILEALAFLHDHNITHLD 136
++T + V+E + G+L + Y +I+ L FLH I + D
Sbjct: 84 FCTFQTKENLFFVMEYLNGGDLMYHIQSCHKFDLSRATFYAAEIILGLQFLHSKGIVYRD 143
Query: 137 LKPQNILLTKDNNIKLCDFGISR--VVNDVVEVKEIIGTPDYVAPEVLSYEPISLATDMW 194
LK NILL KD +IK+ DFG+ + ++ D + GTPDY+APE+L + + + D W
Sbjct: 144 LKLDNILLDKDGHIKIADFGMCKENMLGDA-KTNXFCGTPDYIAPEILLGQKYNHSVDWW 202
Query: 195 SVGVLAYVLLSSHSPFAGDNKQETFLNISQCNFSFHEDLFGHISSQAKDFIQSCLVTDP 253
S GVL Y +L SPF G +++E F +I N F+ + +AKD + V +P
Sbjct: 203 SFGVLLYEMLIGQSPFHGQDEEELFHSIRMDN-PFYPRW---LEKEAKDLLVKLFVREP 257
>pdb|2XRU|A Chain A, Aurora-A T288e Complexed With Pha-828300
Length = 280
Score = 105 bits (262), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 67/234 (28%), Positives = 110/234 (47%), Gaps = 5/234 (2%)
Query: 20 SRGKFASVRKCTHKITKVEYAAKFIRKRRRSMDQMQDILHEAAVLYLAQKSERIVGLHEI 79
+GKF +V K +K A K + K + ++ L + + I+ L+
Sbjct: 17 GKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGY 76
Query: 80 YETPHEMVLVLEMVPDGELQRLVDIQDGIPEQDTRSYMKQILEALAFLHDHNITHLDLKP 139
+ + L+LE P G + R + EQ T +Y+ ++ AL++ H + H D+KP
Sbjct: 77 FHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKRVIHRDIKP 136
Query: 140 QNILLTKDNNIKLCDFGISRVVNDVVEVKEIIGTPDYVAPEVLSYEPISLATDMWSVGVL 199
+N+LL +K+ DFG S V E+ GT DY+ PE++ D+WS+GVL
Sbjct: 137 ENLLLGSAGELKIADFGWS-VHAPSSRRTELCGTLDYLPPEMIEGRMHDEKVDLWSLGVL 195
Query: 200 AYVLLSSHSPFAGDNKQETFLNISQCNFSFHEDLFGHISSQAKDFIQSCLVTDP 253
Y L PF + QET+ IS+ F+F + ++ A+D I L +P
Sbjct: 196 CYEFLVGKPPFEANTYQETYKRISRVEFTFPD----FVTEGARDLISRLLKHNP 245
>pdb|3FHR|A Chain A, High Resolution Crystal Structure Of Mitogen-Activated
Protein Kinase-Activated Protein Kinase 3
(Mk3)-Inhibitor Complex
pdb|3FXW|A Chain A, High Resolution Crystal Structure Of Mitogen-Activated
Protein Kinase- Activated Protein Kinase 3INHIBITOR 2
COMPLEX
Length = 336
Score = 105 bits (261), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 76/245 (31%), Positives = 119/245 (48%), Gaps = 21/245 (8%)
Query: 22 GKFASVRKCTHKITKVEYAAKFIRKRRRSMDQMQDILHEAAVLYLAQKSERIVGLHEIYE 81
G V +C H+ T + A K + ++ Q++ H + A IV + ++YE
Sbjct: 40 GVNGKVLECFHRRTGQKCALKLLYDSPKAR---QEVDHH----WQASGGPHIVCILDVYE 92
Query: 82 TPHE----MVLVLEMVPDGEL-QRLVDIQD-GIPEQDTRSYMKQILEALAFLHDHNITHL 135
H +++++E + GEL R+ + D E++ M+ I A+ FLH HNI H
Sbjct: 93 NMHHGKRCLLIIMECMEGGELFSRIQERGDQAFTEREAAEIMRDIGTAIQFLHSHNIAHR 152
Query: 136 DLKPQNILLT---KDNNIKLCDFGISRVVNDVVEVKEIIGTPDYVAPEVLSYEPISLATD 192
D+KP+N+L T KD +KL DFG ++ ++ TP YVAPEVL E + D
Sbjct: 153 DVKPENLLYTSKEKDAVLKLTDFGFAKETTQNA-LQTPCYTPYYVAPEVLGPEKYDKSCD 211
Query: 193 MWSVGVLAYVLLSSHSPFAGDNKQETFLNISQ----CNFSFHEDLFGHISSQAKDFIQSC 248
MWS+GV+ Y+LL PF + Q + + + F + +S AK I+
Sbjct: 212 MWSLGVIMYILLCGFPPFYSNTGQAISPGMKRRIRLGQYGFPNPEWSEVSEDAKQLIRLL 271
Query: 249 LVTDP 253
L TDP
Sbjct: 272 LKTDP 276
>pdb|3R1N|A Chain A, Mk3 Kinase Bound To Compound 5b
pdb|3SHE|A Chain A, Novel Atp-Competitive Mk2 Inhibitors With Potent
Biochemical And Cell- Based Activity Throughout The
Series
Length = 317
Score = 104 bits (260), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 76/245 (31%), Positives = 119/245 (48%), Gaps = 21/245 (8%)
Query: 22 GKFASVRKCTHKITKVEYAAKFIRKRRRSMDQMQDILHEAAVLYLAQKSERIVGLHEIYE 81
G V +C H+ T + A K + ++ Q++ H + A IV + ++YE
Sbjct: 21 GVNGKVLECFHRRTGQKCALKLLYDSPKAR---QEVDHH----WQASGGPHIVCILDVYE 73
Query: 82 TPHE----MVLVLEMVPDGEL-QRLVDIQD-GIPEQDTRSYMKQILEALAFLHDHNITHL 135
H +++++E + GEL R+ + D E++ M+ I A+ FLH HNI H
Sbjct: 74 NMHHGKRCLLIIMECMEGGELFSRIQERGDQAFTEREAAEIMRDIGTAIQFLHSHNIAHR 133
Query: 136 DLKPQNILLT---KDNNIKLCDFGISRVVNDVVEVKEIIGTPDYVAPEVLSYEPISLATD 192
D+KP+N+L T KD +KL DFG ++ ++ TP YVAPEVL E + D
Sbjct: 134 DVKPENLLYTSKEKDAVLKLTDFGFAKETTQNA-LQTPCYTPYYVAPEVLGPEKYDKSCD 192
Query: 193 MWSVGVLAYVLLSSHSPFAGDNKQETFLNISQ----CNFSFHEDLFGHISSQAKDFIQSC 248
MWS+GV+ Y+LL PF + Q + + + F + +S AK I+
Sbjct: 193 MWSLGVIMYILLCGFPPFYSNTGQAISPGMKRRIRLGQYGFPNPEWSEVSEDAKQLIRLL 252
Query: 249 LVTDP 253
L TDP
Sbjct: 253 LKTDP 257
>pdb|2WTV|A Chain A, Aurora-A Inhibitor Structure
pdb|2WTV|B Chain B, Aurora-A Inhibitor Structure
pdb|2WTV|C Chain C, Aurora-A Inhibitor Structure
pdb|2WTV|D Chain D, Aurora-A Inhibitor Structure
Length = 285
Score = 104 bits (260), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 66/234 (28%), Positives = 110/234 (47%), Gaps = 5/234 (2%)
Query: 20 SRGKFASVRKCTHKITKVEYAAKFIRKRRRSMDQMQDILHEAAVLYLAQKSERIVGLHEI 79
+GKF +V K +K A K + K + ++ L + + I+ L+
Sbjct: 22 GKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGY 81
Query: 80 YETPHEMVLVLEMVPDGELQRLVDIQDGIPEQDTRSYMKQILEALAFLHDHNITHLDLKP 139
+ + L+LE P GE+ + + EQ T +Y+ ++ AL++ H + H D+KP
Sbjct: 82 FHDATRVYLILEYAPRGEVYKELQKLSKFDEQRTATYITELANALSYCHSKRVIHRDIKP 141
Query: 140 QNILLTKDNNIKLCDFGISRVVNDVVEVKEIIGTPDYVAPEVLSYEPISLATDMWSVGVL 199
+N+LL +K+ DFG S V + GT DY+ PE++ D+WS+GVL
Sbjct: 142 ENLLLGSAGELKIADFGWS-VHAPSSRRXXLXGTLDYLPPEMIEGRMHDEKVDLWSLGVL 200
Query: 200 AYVLLSSHSPFAGDNKQETFLNISQCNFSFHEDLFGHISSQAKDFIQSCLVTDP 253
Y L PF + QET+ IS+ F+F + ++ A+D I L +P
Sbjct: 201 CYEFLVGKPPFEANTYQETYKRISRVEFTFPD----FVTEGARDLISRLLKHNP 250
>pdb|2WTW|A Chain A, Aurora-A Inhibitor Structure (2nd Crystal Form)
Length = 285
Score = 104 bits (260), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 66/234 (28%), Positives = 110/234 (47%), Gaps = 5/234 (2%)
Query: 20 SRGKFASVRKCTHKITKVEYAAKFIRKRRRSMDQMQDILHEAAVLYLAQKSERIVGLHEI 79
+GKF +V K +K A K + K + ++ L + + I+ L+
Sbjct: 22 GKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGY 81
Query: 80 YETPHEMVLVLEMVPDGELQRLVDIQDGIPEQDTRSYMKQILEALAFLHDHNITHLDLKP 139
+ + L+LE P GE+ + + EQ T +Y+ ++ AL++ H + H D+KP
Sbjct: 82 FHDATRVYLILEYAPRGEVYKELQKLSKFDEQRTATYITELANALSYCHSKRVIHRDIKP 141
Query: 140 QNILLTKDNNIKLCDFGISRVVNDVVEVKEIIGTPDYVAPEVLSYEPISLATDMWSVGVL 199
+N+LL +K+ DFG S V + GT DY+ PE++ D+WS+GVL
Sbjct: 142 ENLLLGSAGELKIADFGWS-VHAPSSRRTTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVL 200
Query: 200 AYVLLSSHSPFAGDNKQETFLNISQCNFSFHEDLFGHISSQAKDFIQSCLVTDP 253
Y L PF + QET+ IS+ F+F + ++ A+D I L +P
Sbjct: 201 CYEFLVGKPPFEANTYQETYKRISRVEFTFPD----FVTEGARDLISRLLKHNP 250
>pdb|2Z7Q|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk-1 Bound To Amp-Pcp
pdb|2Z7R|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Staurosporine
pdb|2Z7S|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Purvalnol A
Length = 321
Score = 104 bits (260), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 71/246 (28%), Positives = 127/246 (51%), Gaps = 18/246 (7%)
Query: 15 IFCMPSRGKFASVRKCTHKITKVEYAAKFIRK-----RRRSMDQMQ-DILHEAAVLYLAQ 68
+ S GK VRK T + YA K ++K R R +M+ DIL + +
Sbjct: 35 VLGQGSFGKVFLVRKVTRPDSGHLYAMKVLKKATLKVRDRVRTKMERDILADVNHPF--- 91
Query: 69 KSERIVGLHEIYETPHEMVLVLEMVPDGELQRLVDIQDGIPEQDTRSYMKQILEALAFLH 128
+V LH ++T ++ L+L+ + G+L + + E+D + Y+ ++ L LH
Sbjct: 92 ----VVKLHYAFQTEGKLYLILDFLRGGDLFTRLSKEVMFTEEDVKFYLAELALGLDHLH 147
Query: 129 DHNITHLDLKPQNILLTKDNNIKLCDFGISR-VVNDVVEVKEIIGTPDYVAPEVLSYEPI 187
I + DLKP+NILL ++ +IKL DFG+S+ ++ + GT +Y+APEV++ +
Sbjct: 148 SLGIIYRDLKPENILLDEEGHIKLTDFGLSKEAIDHEKKAYSFCGTVEYMAPEVVNRQGH 207
Query: 188 SLATDMWSVGVLAYVLLSSHSPFAGDNKQETFLNISQCNFSFHEDLFGHISSQAKDFIQS 247
S + D WS GVL + +L+ PF G +++ET I + + +S++A+ +++
Sbjct: 208 SHSADWWSYGVLMFEMLTGSLPFQGKDRKETMTLILKAKLGMPQ----FLSTEAQSLLRA 263
Query: 248 CLVTDP 253
+P
Sbjct: 264 LFKRNP 269
>pdb|2C6D|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With
Adpnp
Length = 275
Score = 103 bits (258), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 66/234 (28%), Positives = 110/234 (47%), Gaps = 5/234 (2%)
Query: 20 SRGKFASVRKCTHKITKVEYAAKFIRKRRRSMDQMQDILHEAAVLYLAQKSERIVGLHEI 79
+GKF +V K +K A K + K + ++ L + + I+ L+
Sbjct: 17 GKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGY 76
Query: 80 YETPHEMVLVLEMVPDGELQRLVDIQDGIPEQDTRSYMKQILEALAFLHDHNITHLDLKP 139
+ + L+LE P G + R + EQ T +Y+ ++ AL++ H + H D+KP
Sbjct: 77 FHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKRVIHRDIKP 136
Query: 140 QNILLTKDNNIKLCDFGISRVVNDVVEVKEIIGTPDYVAPEVLSYEPISLATDMWSVGVL 199
+N+LL +K+ DFG S V ++ GT DY+ PE++ D+WS+GVL
Sbjct: 137 ENLLLGSAGELKIADFGWS-VHAPSSRRTDLCGTLDYLPPEMIEGRMHDEKVDLWSLGVL 195
Query: 200 AYVLLSSHSPFAGDNKQETFLNISQCNFSFHEDLFGHISSQAKDFIQSCLVTDP 253
Y L PF + QET+ IS+ F+F + ++ A+D I L +P
Sbjct: 196 CYEFLVGKPPFEANTYQETYKRISRVEFTFPD----FVTEGARDLISRLLKHNP 245
>pdb|3LAU|A Chain A, Crystal Structure Of Aurora2 Kinase In Complex With A
Gsk3beta Inhibitor
Length = 287
Score = 103 bits (258), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 66/234 (28%), Positives = 110/234 (47%), Gaps = 5/234 (2%)
Query: 20 SRGKFASVRKCTHKITKVEYAAKFIRKRRRSMDQMQDILHEAAVLYLAQKSERIVGLHEI 79
+GKF +V K +K A K + K + ++ L + + I+ L+
Sbjct: 17 GKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGY 76
Query: 80 YETPHEMVLVLEMVPDGELQRLVDIQDGIPEQDTRSYMKQILEALAFLHDHNITHLDLKP 139
+ + L+LE P G + R + EQ T +Y+ ++ AL++ H + H D+KP
Sbjct: 77 FHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKRVIHRDIKP 136
Query: 140 QNILLTKDNNIKLCDFGISRVVNDVVEVKEIIGTPDYVAPEVLSYEPISLATDMWSVGVL 199
+N+LL +K+ DFG S V ++ GT DY+ PE++ D+WS+GVL
Sbjct: 137 ENLLLGSAGELKIADFGWS-VHAPSSRRTDLCGTLDYLPPEMIEGRMHDEKVDLWSLGVL 195
Query: 200 AYVLLSSHSPFAGDNKQETFLNISQCNFSFHEDLFGHISSQAKDFIQSCLVTDP 253
Y L PF + QET+ IS+ F+F + ++ A+D I L +P
Sbjct: 196 CYEFLVGKPPFEANTYQETYKRISRVEFTFPD----FVTEGARDLISRLLKHNP 245
>pdb|3R21|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|3R22|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|4DHF|A Chain A, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
pdb|4DHF|B Chain B, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
Length = 271
Score = 103 bits (258), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 66/234 (28%), Positives = 110/234 (47%), Gaps = 5/234 (2%)
Query: 20 SRGKFASVRKCTHKITKVEYAAKFIRKRRRSMDQMQDILHEAAVLYLAQKSERIVGLHEI 79
+GKF +V K +K A K + K + ++ L + + I+ L+
Sbjct: 20 GKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGY 79
Query: 80 YETPHEMVLVLEMVPDGELQRLVDIQDGIPEQDTRSYMKQILEALAFLHDHNITHLDLKP 139
+ + L+LE P G + R + EQ T +Y+ ++ AL++ H + H D+KP
Sbjct: 80 FHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKRVIHRDIKP 139
Query: 140 QNILLTKDNNIKLCDFGISRVVNDVVEVKEIIGTPDYVAPEVLSYEPISLATDMWSVGVL 199
+N+LL +K+ DFG S V ++ GT DY+ PE++ D+WS+GVL
Sbjct: 140 ENLLLGSAGELKIADFGWS-VHAPSSRRDDLCGTLDYLPPEMIEGRMHDEKVDLWSLGVL 198
Query: 200 AYVLLSSHSPFAGDNKQETFLNISQCNFSFHEDLFGHISSQAKDFIQSCLVTDP 253
Y L PF + QET+ IS+ F+F + ++ A+D I L +P
Sbjct: 199 CYEFLVGKPPFEANTYQETYKRISRVEFTFPD----FVTEGARDLISRLLKHNP 248
>pdb|2C6E|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
pdb|2C6E|B Chain B, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
Length = 283
Score = 103 bits (257), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 66/234 (28%), Positives = 110/234 (47%), Gaps = 5/234 (2%)
Query: 20 SRGKFASVRKCTHKITKVEYAAKFIRKRRRSMDQMQDILHEAAVLYLAQKSERIVGLHEI 79
+GKF +V K +K A K + K + ++ L + + I+ L+
Sbjct: 22 GKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGY 81
Query: 80 YETPHEMVLVLEMVPDGELQRLVDIQDGIPEQDTRSYMKQILEALAFLHDHNITHLDLKP 139
+ + L+LE P G + R + EQ T +Y+ ++ AL++ H + H D+KP
Sbjct: 82 FHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKRVIHRDIKP 141
Query: 140 QNILLTKDNNIKLCDFGISRVVNDVVEVKEIIGTPDYVAPEVLSYEPISLATDMWSVGVL 199
+N+LL +K+ DFG S V ++ GT DY+ PE++ D+WS+GVL
Sbjct: 142 ENLLLGSAGELKIADFGWS-VHAPSSRRTDLCGTLDYLPPEMIEGRMHDEKVDLWSLGVL 200
Query: 200 AYVLLSSHSPFAGDNKQETFLNISQCNFSFHEDLFGHISSQAKDFIQSCLVTDP 253
Y L PF + QET+ IS+ F+F + ++ A+D I L +P
Sbjct: 201 CYEFLVGKPPFEANTYQETYKRISRVEFTFPD----FVTEGARDLISRLLKHNP 250
>pdb|3FDN|A Chain A, Structure-Based Drug Design Of Novel Aurora Kinase A
Inhibitors: Structure Basis For Potency And Specificity
pdb|3K5U|A Chain A, Identification, Sar Studies And X-Ray Cocrystal Analysis
Of A Novel Furano-Pyrimidine Aurora Kinase A Inhibitor
pdb|3M11|A Chain A, Crystal Structure Of Aurora A Kinase Complexed With
Inhibitor
Length = 279
Score = 103 bits (257), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 66/234 (28%), Positives = 110/234 (47%), Gaps = 5/234 (2%)
Query: 20 SRGKFASVRKCTHKITKVEYAAKFIRKRRRSMDQMQDILHEAAVLYLAQKSERIVGLHEI 79
+GKF +V K +K A K + K + ++ L + + I+ L+
Sbjct: 18 GKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGY 77
Query: 80 YETPHEMVLVLEMVPDGELQRLVDIQDGIPEQDTRSYMKQILEALAFLHDHNITHLDLKP 139
+ + L+LE P G + R + EQ T +Y+ ++ AL++ H + H D+KP
Sbjct: 78 FHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKRVIHRDIKP 137
Query: 140 QNILLTKDNNIKLCDFGISRVVNDVVEVKEIIGTPDYVAPEVLSYEPISLATDMWSVGVL 199
+N+LL +K+ DFG S V ++ GT DY+ PE++ D+WS+GVL
Sbjct: 138 ENLLLGSAGELKIADFGWS-VHAPSSRRTDLCGTLDYLPPEMIEGRMHDEKVDLWSLGVL 196
Query: 200 AYVLLSSHSPFAGDNKQETFLNISQCNFSFHEDLFGHISSQAKDFIQSCLVTDP 253
Y L PF + QET+ IS+ F+F + ++ A+D I L +P
Sbjct: 197 CYEFLVGKPPFEANTYQETYKRISRVEFTFPD----FVTEGARDLISRLLKHNP 246
>pdb|3HA6|A Chain A, Crystal Structure Of Aurora A In Complex With Tpx2 And
Compound 10
Length = 268
Score = 103 bits (256), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 66/234 (28%), Positives = 109/234 (46%), Gaps = 5/234 (2%)
Query: 20 SRGKFASVRKCTHKITKVEYAAKFIRKRRRSMDQMQDILHEAAVLYLAQKSERIVGLHEI 79
+GKF +V K +K A K + K + ++ L + + I+ L+
Sbjct: 17 GKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGY 76
Query: 80 YETPHEMVLVLEMVPDGELQRLVDIQDGIPEQDTRSYMKQILEALAFLHDHNITHLDLKP 139
+ + L+LE P G + R + EQ T +Y+ ++ AL++ H + H D+KP
Sbjct: 77 FHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKRVIHRDIKP 136
Query: 140 QNILLTKDNNIKLCDFGISRVVNDVVEVKEIIGTPDYVAPEVLSYEPISLATDMWSVGVL 199
+N+LL +K+ DFG S V + GT DY+ PE++ D+WS+GVL
Sbjct: 137 ENLLLGSAGELKIADFGWS-VHAPSSRRXXLCGTLDYLPPEMIEGRMHDEKVDLWSLGVL 195
Query: 200 AYVLLSSHSPFAGDNKQETFLNISQCNFSFHEDLFGHISSQAKDFIQSCLVTDP 253
Y L PF + QET+ IS+ F+F + ++ A+D I L +P
Sbjct: 196 CYEFLVGKPPFEANTYQETYKRISRVEFTFPD----FVTEGARDLISRLLKHNP 245
>pdb|2W1C|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1G|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 103 bits (256), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 66/234 (28%), Positives = 109/234 (46%), Gaps = 5/234 (2%)
Query: 20 SRGKFASVRKCTHKITKVEYAAKFIRKRRRSMDQMQDILHEAAVLYLAQKSERIVGLHEI 79
+GKF +V K +K A K + K + ++ L + + I+ L+
Sbjct: 20 GKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGY 79
Query: 80 YETPHEMVLVLEMVPDGELQRLVDIQDGIPEQDTRSYMKQILEALAFLHDHNITHLDLKP 139
+ + L+LE P G + R + EQ T +Y+ ++ AL++ H + H D+KP
Sbjct: 80 FHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKRVIHRDIKP 139
Query: 140 QNILLTKDNNIKLCDFGISRVVNDVVEVKEIIGTPDYVAPEVLSYEPISLATDMWSVGVL 199
+N+LL +K+ DFG S V + GT DY+ PE++ D+WS+GVL
Sbjct: 140 ENLLLGSAGELKIADFGWS-VHAPSSRRXXLCGTLDYLPPEMIEGRMHDEKVDLWSLGVL 198
Query: 200 AYVLLSSHSPFAGDNKQETFLNISQCNFSFHEDLFGHISSQAKDFIQSCLVTDP 253
Y L PF + QET+ IS+ F+F + ++ A+D I L +P
Sbjct: 199 CYEFLVGKPPFEANTYQETYKRISRVEFTFPD----FVTEGARDLISRLLKHNP 248
>pdb|3E5A|A Chain A, Crystal Structure Of Aurora A In Complex With Vx-680 And
Tpx2
Length = 268
Score = 103 bits (256), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 66/234 (28%), Positives = 109/234 (46%), Gaps = 5/234 (2%)
Query: 20 SRGKFASVRKCTHKITKVEYAAKFIRKRRRSMDQMQDILHEAAVLYLAQKSERIVGLHEI 79
+GKF +V K +K A K + K + ++ L + + I+ L+
Sbjct: 17 GKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGY 76
Query: 80 YETPHEMVLVLEMVPDGELQRLVDIQDGIPEQDTRSYMKQILEALAFLHDHNITHLDLKP 139
+ + L+LE P G + R + EQ T +Y+ ++ AL++ H + H D+KP
Sbjct: 77 FHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKRVIHRDIKP 136
Query: 140 QNILLTKDNNIKLCDFGISRVVNDVVEVKEIIGTPDYVAPEVLSYEPISLATDMWSVGVL 199
+N+LL +K+ DFG S V + GT DY+ PE++ D+WS+GVL
Sbjct: 137 ENLLLGSAGELKIADFGWS-VHAPSSRRTXLCGTLDYLPPEMIEGRMHDEKVDLWSLGVL 195
Query: 200 AYVLLSSHSPFAGDNKQETFLNISQCNFSFHEDLFGHISSQAKDFIQSCLVTDP 253
Y L PF + QET+ IS+ F+F + ++ A+D I L +P
Sbjct: 196 CYEFLVGKPPFEANTYQETYKRISRVEFTFPD----FVTEGARDLISRLLKHNP 245
>pdb|3NRM|A Chain A, Imidazo[1,2-A]pyrazine-Based Aurora Kinase Inhibitors
Length = 283
Score = 103 bits (256), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 66/234 (28%), Positives = 109/234 (46%), Gaps = 5/234 (2%)
Query: 20 SRGKFASVRKCTHKITKVEYAAKFIRKRRRSMDQMQDILHEAAVLYLAQKSERIVGLHEI 79
+GKF +V K +K A K + K + ++ L + + I+ L+
Sbjct: 20 GKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGY 79
Query: 80 YETPHEMVLVLEMVPDGELQRLVDIQDGIPEQDTRSYMKQILEALAFLHDHNITHLDLKP 139
+ + L+LE P G + R + EQ T +Y+ ++ AL++ H + H D+KP
Sbjct: 80 FHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKRVIHRDIKP 139
Query: 140 QNILLTKDNNIKLCDFGISRVVNDVVEVKEIIGTPDYVAPEVLSYEPISLATDMWSVGVL 199
+N+LL +K+ DFG S V + GT DY+ PE++ D+WS+GVL
Sbjct: 140 ENLLLGSAGELKIADFGWS-VHAPSSRRAALCGTLDYLPPEMIEGRMHDEKVDLWSLGVL 198
Query: 200 AYVLLSSHSPFAGDNKQETFLNISQCNFSFHEDLFGHISSQAKDFIQSCLVTDP 253
Y L PF + QET+ IS+ F+F + ++ A+D I L +P
Sbjct: 199 CYEFLVGKPPFEANTYQETYKRISRVEFTFPD----FVTEGARDLISRLLKHNP 248
>pdb|1MQ4|A Chain A, Crystal Structure Of Aurora-A Protein Kinase
pdb|2NP8|A Chain A, Structural Basis For The Inhibition Of Aurora A Kinase By
A Novel Class Of High Affinity Disubstituted Pyrimidine
Inhibitors
pdb|2X81|A Chain A, Structure Of Aurora A In Complex With Mln8054
pdb|3MYG|A Chain A, Aurora A Kinase Complexed With Sch 1473759
pdb|3VAP|A Chain A, Synthesis And Sar Studies Of Imidazo-[1,2-A]-Pyrazine
Aurora Kinase Inhibitors With Improved Off Target Kinase
Selectivity
Length = 272
Score = 103 bits (256), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 66/234 (28%), Positives = 109/234 (46%), Gaps = 5/234 (2%)
Query: 20 SRGKFASVRKCTHKITKVEYAAKFIRKRRRSMDQMQDILHEAAVLYLAQKSERIVGLHEI 79
+GKF +V K +K A K + K + ++ L + + I+ L+
Sbjct: 21 GKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGY 80
Query: 80 YETPHEMVLVLEMVPDGELQRLVDIQDGIPEQDTRSYMKQILEALAFLHDHNITHLDLKP 139
+ + L+LE P G + R + EQ T +Y+ ++ AL++ H + H D+KP
Sbjct: 81 FHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKRVIHRDIKP 140
Query: 140 QNILLTKDNNIKLCDFGISRVVNDVVEVKEIIGTPDYVAPEVLSYEPISLATDMWSVGVL 199
+N+LL +K+ DFG S V + GT DY+ PE++ D+WS+GVL
Sbjct: 141 ENLLLGSAGELKIADFGWS-VHAPSSRRTTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVL 199
Query: 200 AYVLLSSHSPFAGDNKQETFLNISQCNFSFHEDLFGHISSQAKDFIQSCLVTDP 253
Y L PF + QET+ IS+ F+F + ++ A+D I L +P
Sbjct: 200 CYEFLVGKPPFEANTYQETYKRISRVEFTFPD----FVTEGARDLISRLLKHNP 249
>pdb|3H0Y|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|B Chain B, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|C Chain C, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H10|A Chain A, Aurora A Inhibitor Complex
pdb|3H10|B Chain B, Aurora A Inhibitor Complex
pdb|3H10|D Chain D, Aurora A Inhibitor Complex
pdb|3P9J|A Chain A, Aurora A Kinase Domain With Phthalazinone Pyrazole
Inhibitor
Length = 268
Score = 103 bits (256), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 66/234 (28%), Positives = 109/234 (46%), Gaps = 5/234 (2%)
Query: 20 SRGKFASVRKCTHKITKVEYAAKFIRKRRRSMDQMQDILHEAAVLYLAQKSERIVGLHEI 79
+GKF +V K +K A K + K + ++ L + + I+ L+
Sbjct: 17 GKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGY 76
Query: 80 YETPHEMVLVLEMVPDGELQRLVDIQDGIPEQDTRSYMKQILEALAFLHDHNITHLDLKP 139
+ + L+LE P G + R + EQ T +Y+ ++ AL++ H + H D+KP
Sbjct: 77 FHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKRVIHRDIKP 136
Query: 140 QNILLTKDNNIKLCDFGISRVVNDVVEVKEIIGTPDYVAPEVLSYEPISLATDMWSVGVL 199
+N+LL +K+ DFG S V + GT DY+ PE++ D+WS+GVL
Sbjct: 137 ENLLLGSAGELKIADFGWS-VHAPSSRRAALCGTLDYLPPEMIEGRMHDEKVDLWSLGVL 195
Query: 200 AYVLLSSHSPFAGDNKQETFLNISQCNFSFHEDLFGHISSQAKDFIQSCLVTDP 253
Y L PF + QET+ IS+ F+F + ++ A+D I L +P
Sbjct: 196 CYEFLVGKPPFEANTYQETYKRISRVEFTFPD----FVTEGARDLISRLLKHNP 245
>pdb|1GZK|A Chain A, Molecular Mechanism For The Regulation Of Protein Kinase B
Akt By Hydrophobic Motif Phosphorylation
pdb|1GZO|A Chain A, Structure Of Protein Kinase B Unphosphorylated
Length = 315
Score = 102 bits (255), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 69/236 (29%), Positives = 112/236 (47%), Gaps = 7/236 (2%)
Query: 20 SRGKFASVRKCTHKITKVEYAAKFIRKRRR-SMDQMQDILHEAAVLYLAQKSERIVGLHE 78
+G F V K T YA K +RK + D++ + E+ VL + + L
Sbjct: 14 GKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQ-NTRHPFLTALKY 72
Query: 79 IYETPHEMVLVLEMVPDGELQRLVDIQDGIPEQDTRSYMKQILEALAFLHDHNITHLDLK 138
++T + V+E GEL + + E+ R Y +I+ AL +LH ++ + D+K
Sbjct: 73 AFQTHDRLCFVMEYANGGELFFHLSRERVFTEERARFYGAEIVSALEYLHSRDVVYRDIK 132
Query: 139 PQNILLTKDNNIKLCDFGISR-VVNDVVEVKEIIGTPDYVAPEVLSYEPISLATDMWSVG 197
+N++L KD +IK+ DFG+ + ++D +K GTP+Y+APEVL A D W +G
Sbjct: 133 LENLMLDKDGHIKITDFGLCKEGISDGATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLG 192
Query: 198 VLAYVLLSSHSPFAGDNKQETFLNISQCNFSFHEDLFGHISSQAKDFIQSCLVTDP 253
V+ Y ++ PF + + F I F L S +AK + L DP
Sbjct: 193 VVMYEMMCGRLPFYNQDHERLFELILMEEIRFPRTL----SPEAKSLLAGLLKKDP 244
>pdb|2HW6|A Chain A, Crystal Structure Of Mnk1 Catalytic Domain
pdb|2HW6|B Chain B, Crystal Structure Of Mnk1 Catalytic Domain
Length = 307
Score = 102 bits (255), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 76/264 (28%), Positives = 118/264 (44%), Gaps = 33/264 (12%)
Query: 20 SRGKFASVRKCTHKITKVEYAAKFIRKRRRSMDQMQDILHEAAVLYLAQKSERIVGLHEI 79
G +A V+ EYA K I K+ + + E LY Q ++ I+ L E
Sbjct: 22 GEGAYAKVQGAVSLQNGKEYAVKIIEKQ--AGHSRSRVFREVETLYQCQGNKNILELIEF 79
Query: 80 YETPHEMVLVLEMVPDGELQRLVDIQDGIPEQDTRSYMKQILEALAFLHDHNITHLDLKP 139
+E LV E + G + + Q E++ ++ + AL FLH I H DLKP
Sbjct: 80 FEDDTRFYLVFEKLQGGSILAHIQKQKHFNEREASRVVRDVAAALDFLHTKGIAHRDLKP 139
Query: 140 QNILL---TKDNNIKLCDF--GISRVVNDVV------EVKEIIGTPDYVAPEVLSYEPIS 188
+NIL K + +K+CDF G +N+ E+ G+ +Y+APEV+
Sbjct: 140 ENILCESPEKVSPVKICDFDLGSGMKLNNSCTPITTPELTTPCGSAEYMAPEVVEVFTDQ 199
Query: 189 LA-----TDMWSVGVLAYVLLSSHSPFAGD---------------NKQETFLNISQCNFS 228
D+WS+GV+ Y++LS + PF G + + F +I + +
Sbjct: 200 ATFYDKRCDLWSLGVVLYIMLSGYPPFVGHCGADCGWDRGEVCRVCQNKLFESIQEGKYE 259
Query: 229 FHEDLFGHISSQAKDFIQSCLVTD 252
F + + HISS+AKD I LV D
Sbjct: 260 FPDKDWAHISSEAKDLISKLLVRD 283
>pdb|3O50|A Chain A, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O50|B Chain B, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O51|A Chain A, Crystal Structure Of Anthranilamide 10 Bound To Auroraa
pdb|3EFW|A Chain A, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
pdb|3EFW|B Chain B, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
Length = 267
Score = 102 bits (255), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 66/234 (28%), Positives = 109/234 (46%), Gaps = 5/234 (2%)
Query: 20 SRGKFASVRKCTHKITKVEYAAKFIRKRRRSMDQMQDILHEAAVLYLAQKSERIVGLHEI 79
+GKF +V K +K A K + K + ++ L + + I+ L+
Sbjct: 16 GKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGY 75
Query: 80 YETPHEMVLVLEMVPDGELQRLVDIQDGIPEQDTRSYMKQILEALAFLHDHNITHLDLKP 139
+ + L+LE P G + R + EQ T +Y+ ++ AL++ H + H D+KP
Sbjct: 76 FHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKRVIHRDIKP 135
Query: 140 QNILLTKDNNIKLCDFGISRVVNDVVEVKEIIGTPDYVAPEVLSYEPISLATDMWSVGVL 199
+N+LL +K+ DFG S V + GT DY+ PE++ D+WS+GVL
Sbjct: 136 ENLLLGSAGELKIADFGWS-VHAPSSRRTTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVL 194
Query: 200 AYVLLSSHSPFAGDNKQETFLNISQCNFSFHEDLFGHISSQAKDFIQSCLVTDP 253
Y L PF + QET+ IS+ F+F + ++ A+D I L +P
Sbjct: 195 CYEFLVGKPPFEANTYQETYKRISRVEFTFPD----FVTEGARDLISRLLKHNP 244
>pdb|1OL5|A Chain A, Structure Of Aurora-A 122-403, Phosphorylated On Thr287,
Thr288 And Bound To Tpx2 1-43
pdb|1OL7|A Chain A, Structure Of Human Aurora-A 122-403 Phosphorylated On
Thr287, Thr288
Length = 282
Score = 102 bits (255), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 66/234 (28%), Positives = 109/234 (46%), Gaps = 5/234 (2%)
Query: 20 SRGKFASVRKCTHKITKVEYAAKFIRKRRRSMDQMQDILHEAAVLYLAQKSERIVGLHEI 79
+GKF +V K +K A K + K + ++ L + + I+ L+
Sbjct: 19 GKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGY 78
Query: 80 YETPHEMVLVLEMVPDGELQRLVDIQDGIPEQDTRSYMKQILEALAFLHDHNITHLDLKP 139
+ + L+LE P G + R + EQ T +Y+ ++ AL++ H + H D+KP
Sbjct: 79 FHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKRVIHRDIKP 138
Query: 140 QNILLTKDNNIKLCDFGISRVVNDVVEVKEIIGTPDYVAPEVLSYEPISLATDMWSVGVL 199
+N+LL +K+ DFG S V + GT DY+ PE++ D+WS+GVL
Sbjct: 139 ENLLLGSAGELKIADFGWS-VHAPSSRRXXLCGTLDYLPPEMIEGRMHDEKVDLWSLGVL 197
Query: 200 AYVLLSSHSPFAGDNKQETFLNISQCNFSFHEDLFGHISSQAKDFIQSCLVTDP 253
Y L PF + QET+ IS+ F+F + ++ A+D I L +P
Sbjct: 198 CYEFLVGKPPFEANTYQETYKRISRVEFTFPD----FVTEGARDLISRLLKHNP 247
>pdb|2J50|A Chain A, Structure Of Aurora-2 In Complex With Pha-739358
pdb|2J50|B Chain B, Structure Of Aurora-2 In Complex With Pha-739358
Length = 280
Score = 102 bits (255), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 66/234 (28%), Positives = 109/234 (46%), Gaps = 5/234 (2%)
Query: 20 SRGKFASVRKCTHKITKVEYAAKFIRKRRRSMDQMQDILHEAAVLYLAQKSERIVGLHEI 79
+GKF +V K +K A K + K + ++ L + + I+ L+
Sbjct: 17 GKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGY 76
Query: 80 YETPHEMVLVLEMVPDGELQRLVDIQDGIPEQDTRSYMKQILEALAFLHDHNITHLDLKP 139
+ + L+LE P G + R + EQ T +Y+ ++ AL++ H + H D+KP
Sbjct: 77 FHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKRVIHRDIKP 136
Query: 140 QNILLTKDNNIKLCDFGISRVVNDVVEVKEIIGTPDYVAPEVLSYEPISLATDMWSVGVL 199
+N+LL +K+ DFG S V + GT DY+ PE++ D+WS+GVL
Sbjct: 137 ENLLLGSAGELKIADFGWS-VHAPSSRRTTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVL 195
Query: 200 AYVLLSSHSPFAGDNKQETFLNISQCNFSFHEDLFGHISSQAKDFIQSCLVTDP 253
Y L PF + QET+ IS+ F+F + ++ A+D I L +P
Sbjct: 196 CYEFLVGKPPFEANTYQETYKRISRVEFTFPD----FVTEGARDLISRLLKHNP 245
>pdb|2W1D|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1E|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1F|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 102 bits (255), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 66/234 (28%), Positives = 109/234 (46%), Gaps = 5/234 (2%)
Query: 20 SRGKFASVRKCTHKITKVEYAAKFIRKRRRSMDQMQDILHEAAVLYLAQKSERIVGLHEI 79
+GKF +V K +K A K + K + ++ L + + I+ L+
Sbjct: 20 GKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGY 79
Query: 80 YETPHEMVLVLEMVPDGELQRLVDIQDGIPEQDTRSYMKQILEALAFLHDHNITHLDLKP 139
+ + L+LE P G + R + EQ T +Y+ ++ AL++ H + H D+KP
Sbjct: 80 FHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKRVIHRDIKP 139
Query: 140 QNILLTKDNNIKLCDFGISRVVNDVVEVKEIIGTPDYVAPEVLSYEPISLATDMWSVGVL 199
+N+LL +K+ DFG S V + GT DY+ PE++ D+WS+GVL
Sbjct: 140 ENLLLGSAGELKIADFGWS-VHAPSSRRTTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVL 198
Query: 200 AYVLLSSHSPFAGDNKQETFLNISQCNFSFHEDLFGHISSQAKDFIQSCLVTDP 253
Y L PF + QET+ IS+ F+F + ++ A+D I L +P
Sbjct: 199 CYEFLVGKPPFEANTYQETYKRISRVEFTFPD----FVTEGARDLISRLLKHNP 248
>pdb|1GZN|A Chain A, Structure Of Pkb Kinase Domain
Length = 335
Score = 102 bits (255), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 69/236 (29%), Positives = 112/236 (47%), Gaps = 7/236 (2%)
Query: 20 SRGKFASVRKCTHKITKVEYAAKFIRKRRR-SMDQMQDILHEAAVLYLAQKSERIVGLHE 78
+G F V K T YA K +RK + D++ + E+ VL + + L
Sbjct: 14 GKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQ-NTRHPFLTALKY 72
Query: 79 IYETPHEMVLVLEMVPDGELQRLVDIQDGIPEQDTRSYMKQILEALAFLHDHNITHLDLK 138
++T + V+E GEL + + E+ R Y +I+ AL +LH ++ + D+K
Sbjct: 73 AFQTHDRLCFVMEYANGGELFFHLSRERVFTEERARFYGAEIVSALEYLHSRDVVYRDIK 132
Query: 139 PQNILLTKDNNIKLCDFGISR-VVNDVVEVKEIIGTPDYVAPEVLSYEPISLATDMWSVG 197
+N++L KD +IK+ DFG+ + ++D +K GTP+Y+APEVL A D W +G
Sbjct: 133 LENLMLDKDGHIKITDFGLCKEGISDGATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLG 192
Query: 198 VLAYVLLSSHSPFAGDNKQETFLNISQCNFSFHEDLFGHISSQAKDFIQSCLVTDP 253
V+ Y ++ PF + + F I F L S +AK + L DP
Sbjct: 193 VVMYEMMCGRLPFYNQDHERLFELILMEEIRFPRTL----SPEAKSLLAGLLKKDP 244
>pdb|3E87|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E87|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3D0E|A Chain A, Crystal Structure Of Human Akt2 In Complex With Gsk690693
pdb|3D0E|B Chain B, Crystal Structure Of Human Akt2 In Complex With Gsk690693
Length = 335
Score = 102 bits (255), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 69/236 (29%), Positives = 112/236 (47%), Gaps = 7/236 (2%)
Query: 20 SRGKFASVRKCTHKITKVEYAAKFIRKRRR-SMDQMQDILHEAAVLYLAQKSERIVGLHE 78
+G F V K T YA K +RK + D++ + E+ VL + + L
Sbjct: 14 GKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQ-NTRHPFLTALKY 72
Query: 79 IYETPHEMVLVLEMVPDGELQRLVDIQDGIPEQDTRSYMKQILEALAFLHDHNITHLDLK 138
++T + V+E GEL + + E+ R Y +I+ AL +LH ++ + D+K
Sbjct: 73 AFQTHDRLCFVMEYANGGELFFHLSRERVFTEERARFYGAEIVSALEYLHSRDVVYRDIK 132
Query: 139 PQNILLTKDNNIKLCDFGISR-VVNDVVEVKEIIGTPDYVAPEVLSYEPISLATDMWSVG 197
+N++L KD +IK+ DFG+ + ++D +K GTP+Y+APEVL A D W +G
Sbjct: 133 LENLMLDKDGHIKITDFGLCKEGISDGATMKXFCGTPEYLAPEVLEDNDYGRAVDWWGLG 192
Query: 198 VLAYVLLSSHSPFAGDNKQETFLNISQCNFSFHEDLFGHISSQAKDFIQSCLVTDP 253
V+ Y ++ PF + + F I F L S +AK + L DP
Sbjct: 193 VVMYEMMCGRLPFYNQDHERLFELILMEEIRFPRTL----SPEAKSLLAGLLKKDP 244
>pdb|1MRV|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
pdb|1MRY|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
Length = 339
Score = 102 bits (255), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 69/236 (29%), Positives = 112/236 (47%), Gaps = 7/236 (2%)
Query: 20 SRGKFASVRKCTHKITKVEYAAKFIRKRRR-SMDQMQDILHEAAVLYLAQKSERIVGLHE 78
+G F V K T YA K +RK + D++ + E+ VL + + L
Sbjct: 17 GKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQ-NTRHPFLTALKY 75
Query: 79 IYETPHEMVLVLEMVPDGELQRLVDIQDGIPEQDTRSYMKQILEALAFLHDHNITHLDLK 138
++T + V+E GEL + + E+ R Y +I+ AL +LH ++ + D+K
Sbjct: 76 AFQTHDRLCFVMEYANGGELFFHLSRERVFTEERARFYGAEIVSALEYLHSRDVVYRDIK 135
Query: 139 PQNILLTKDNNIKLCDFGISR-VVNDVVEVKEIIGTPDYVAPEVLSYEPISLATDMWSVG 197
+N++L KD +IK+ DFG+ + ++D +K GTP+Y+APEVL A D W +G
Sbjct: 136 LENLMLDKDGHIKITDFGLCKEGISDGATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLG 195
Query: 198 VLAYVLLSSHSPFAGDNKQETFLNISQCNFSFHEDLFGHISSQAKDFIQSCLVTDP 253
V+ Y ++ PF + + F I F L S +AK + L DP
Sbjct: 196 VVMYEMMCGRLPFYNQDHERLFELILMEEIRFPRTL----SPEAKSLLAGLLKKDP 247
>pdb|1O6K|A Chain A, Structure Of Activated Form Of Pkb Kinase Domain S474d
With Gsk3 Peptide And Amp-Pnp
Length = 336
Score = 102 bits (255), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 69/236 (29%), Positives = 112/236 (47%), Gaps = 7/236 (2%)
Query: 20 SRGKFASVRKCTHKITKVEYAAKFIRKRRR-SMDQMQDILHEAAVLYLAQKSERIVGLHE 78
+G F V K T YA K +RK + D++ + E+ VL + + L
Sbjct: 14 GKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQ-NTRHPFLTALKY 72
Query: 79 IYETPHEMVLVLEMVPDGELQRLVDIQDGIPEQDTRSYMKQILEALAFLHDHNITHLDLK 138
++T + V+E GEL + + E+ R Y +I+ AL +LH ++ + D+K
Sbjct: 73 AFQTHDRLCFVMEYANGGELFFHLSRERVFTEERARFYGAEIVSALEYLHSRDVVYRDIK 132
Query: 139 PQNILLTKDNNIKLCDFGISRV-VNDVVEVKEIIGTPDYVAPEVLSYEPISLATDMWSVG 197
+N++L KD +IK+ DFG+ + ++D +K GTP+Y+APEVL A D W +G
Sbjct: 133 LENLMLDKDGHIKITDFGLCKEGISDGATMKXFCGTPEYLAPEVLEDNDYGRAVDWWGLG 192
Query: 198 VLAYVLLSSHSPFAGDNKQETFLNISQCNFSFHEDLFGHISSQAKDFIQSCLVTDP 253
V+ Y ++ PF + + F I F L S +AK + L DP
Sbjct: 193 VVMYEMMCGRLPFYNQDHERLFELILMEEIRFPRTL----SPEAKSLLAGLLKKDP 244
>pdb|4AE6|A Chain A, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit Calpha 2
pdb|4AE6|B Chain B, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit Calpha 2
Length = 343
Score = 102 bits (255), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 67/232 (28%), Positives = 113/232 (48%), Gaps = 8/232 (3%)
Query: 22 GKFASVRKCTHKITKVEYAAKFIRKRRR-SMDQMQDILHEAAVLYLAQKSERIVGLHEIY 80
G F V HK T YA K + K++ + Q++ L+E +L A +V L +
Sbjct: 45 GSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQ-AVNFPFLVKLEFSF 103
Query: 81 ETPHEMVLVLEMVPDGELQRLVDIQDGIPEQDTRSYMKQILEALAFLHDHNITHLDLKPQ 140
+ + +V+E VP GE+ + E R Y QI+ +LH ++ + DLKP+
Sbjct: 104 KDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPE 163
Query: 141 NILLTKDNNIKLCDFGISRVVNDVVEVKEIIGTPDYVAPEVLSYEPISLATDMWSVGVLA 200
N+L+ + I++ DFG ++ V + GTP+Y+APE++ + + A D W++GVL
Sbjct: 164 NLLIDQQGYIQVTDFGFAKRVKG--RTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLI 221
Query: 201 YVLLSSHSPFAGDNKQETFLNISQCNFSFHEDLFGHISSQAKDFIQSCLVTD 252
Y + + + PF D + + I F H SS KD +++ L D
Sbjct: 222 YEMAAGYPPFFADQPIQIYEKIVSGKVRFP----SHFSSDLKDLLRNLLQVD 269
>pdb|2DWB|A Chain A, Aurora-A Kinase Complexed With Amppnp
Length = 285
Score = 102 bits (255), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 66/234 (28%), Positives = 108/234 (46%), Gaps = 5/234 (2%)
Query: 20 SRGKFASVRKCTHKITKVEYAAKFIRKRRRSMDQMQDILHEAAVLYLAQKSERIVGLHEI 79
+GKF +V K +K A K + K + ++ L + + I+ L+
Sbjct: 22 GKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGY 81
Query: 80 YETPHEMVLVLEMVPDGELQRLVDIQDGIPEQDTRSYMKQILEALAFLHDHNITHLDLKP 139
+ + L+LE P G + R + EQ T +Y+ ++ AL++ H + H D+KP
Sbjct: 82 FHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKRVIHRDIKP 141
Query: 140 QNILLTKDNNIKLCDFGISRVVNDVVEVKEIIGTPDYVAPEVLSYEPISLATDMWSVGVL 199
+N+LL +K+ DFG S V + GT DY+ PE + D+WS+GVL
Sbjct: 142 ENLLLGSAGELKIADFGWS-VHAPSSRRTTLCGTLDYLPPEXIEGRXHDEKVDLWSLGVL 200
Query: 200 AYVLLSSHSPFAGDNKQETFLNISQCNFSFHEDLFGHISSQAKDFIQSCLVTDP 253
Y L PF + QET+ IS+ F+F + ++ A+D I L +P
Sbjct: 201 CYEFLVGKPPFEANTYQETYKRISRVEFTFPD----FVTEGARDLISRLLKHNP 250
>pdb|1O6L|A Chain A, Crystal Structure Of An Activated Akt/protein Kinase B
(pkb-pif Chimera) Ternary Complex With Amp-pnp And Gsk3
Peptide
Length = 337
Score = 102 bits (255), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 69/236 (29%), Positives = 112/236 (47%), Gaps = 7/236 (2%)
Query: 20 SRGKFASVRKCTHKITKVEYAAKFIRKRRR-SMDQMQDILHEAAVLYLAQKSERIVGLHE 78
+G F V K T YA K +RK + D++ + E+ VL + + L
Sbjct: 14 GKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQ-NTRHPFLTALKY 72
Query: 79 IYETPHEMVLVLEMVPDGELQRLVDIQDGIPEQDTRSYMKQILEALAFLHDHNITHLDLK 138
++T + V+E GEL + + E+ R Y +I+ AL +LH ++ + D+K
Sbjct: 73 AFQTHDRLCFVMEYANGGELFFHLSRERVFTEERARFYGAEIVSALEYLHSRDVVYRDIK 132
Query: 139 PQNILLTKDNNIKLCDFGISRV-VNDVVEVKEIIGTPDYVAPEVLSYEPISLATDMWSVG 197
+N++L KD +IK+ DFG+ + ++D +K GTP+Y+APEVL A D W +G
Sbjct: 133 LENLMLDKDGHIKITDFGLCKEGISDGATMKXFCGTPEYLAPEVLEDNDYGRAVDWWGLG 192
Query: 198 VLAYVLLSSHSPFAGDNKQETFLNISQCNFSFHEDLFGHISSQAKDFIQSCLVTDP 253
V+ Y ++ PF + + F I F L S +AK + L DP
Sbjct: 193 VVMYEMMCGRLPFYNQDHERLFELILMEEIRFPRTL----SPEAKSLLAGLLKKDP 244
>pdb|3AGL|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1039
pdb|3AGL|B Chain B, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1039
pdb|3VQH|A Chain A, Bromine Sad Partially Resolves Multiple Binding Modes For
Pka Inhibitor H-89
Length = 351
Score = 102 bits (255), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 67/232 (28%), Positives = 113/232 (48%), Gaps = 8/232 (3%)
Query: 22 GKFASVRKCTHKITKVEYAAKFIRKRRR-SMDQMQDILHEAAVLYLAQKSERIVGLHEIY 80
G F V HK T YA K + K++ + Q++ L+E +L A +V L +
Sbjct: 53 GSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQ-AVNFPFLVKLEFSF 111
Query: 81 ETPHEMVLVLEMVPDGELQRLVDIQDGIPEQDTRSYMKQILEALAFLHDHNITHLDLKPQ 140
+ + +V+E VP GE+ + E R Y QI+ +LH ++ + DLKP+
Sbjct: 112 KDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPE 171
Query: 141 NILLTKDNNIKLCDFGISRVVNDVVEVKEIIGTPDYVAPEVLSYEPISLATDMWSVGVLA 200
N+L+ + I++ DFG ++ V + GTP+Y+APE++ + + A D W++GVL
Sbjct: 172 NLLIDQQGYIQVTDFGFAKRVKG--RTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLI 229
Query: 201 YVLLSSHSPFAGDNKQETFLNISQCNFSFHEDLFGHISSQAKDFIQSCLVTD 252
Y + + + PF D + + I F H SS KD +++ L D
Sbjct: 230 YEMAAGYPPFFADQPIQIYEKIVSGKVRFP----SHFSSDLKDLLRNLLQVD 277
>pdb|2XNG|A Chain A, Structure Of Aurora-A Bound To A Selective Imidazopyrazine
Inhibitor
Length = 283
Score = 102 bits (255), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 66/234 (28%), Positives = 109/234 (46%), Gaps = 5/234 (2%)
Query: 20 SRGKFASVRKCTHKITKVEYAAKFIRKRRRSMDQMQDILHEAAVLYLAQKSERIVGLHEI 79
+GKF +V K +K A K + K + ++ L + + I+ L+
Sbjct: 20 GKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGY 79
Query: 80 YETPHEMVLVLEMVPDGELQRLVDIQDGIPEQDTRSYMKQILEALAFLHDHNITHLDLKP 139
+ + L+LE P G + R + EQ T +Y+ ++ AL++ H + H D+KP
Sbjct: 80 FHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKRVIHRDIKP 139
Query: 140 QNILLTKDNNIKLCDFGISRVVNDVVEVKEIIGTPDYVAPEVLSYEPISLATDMWSVGVL 199
+N+LL +K+ DFG S V + GT DY+ PE++ D+WS+GVL
Sbjct: 140 ENLLLGSAGELKIADFGWS-VHAPSSRRTTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVL 198
Query: 200 AYVLLSSHSPFAGDNKQETFLNISQCNFSFHEDLFGHISSQAKDFIQSCLVTDP 253
Y L PF + QET+ IS+ F+F + ++ A+D I L +P
Sbjct: 199 CYEFLVGKPPFEANTYQETYKRISRVEFTFPD----FVTEGARDLISRLLKHNP 248
>pdb|2X6D|A Chain A, Aurora-A Bound To An Inhibitor
pdb|2X6E|A Chain A, Aurora-A Bound To An Inhibitor
Length = 285
Score = 102 bits (255), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 66/234 (28%), Positives = 109/234 (46%), Gaps = 5/234 (2%)
Query: 20 SRGKFASVRKCTHKITKVEYAAKFIRKRRRSMDQMQDILHEAAVLYLAQKSERIVGLHEI 79
+GKF +V K +K A K + K + ++ L + + I+ L+
Sbjct: 22 GKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGY 81
Query: 80 YETPHEMVLVLEMVPDGELQRLVDIQDGIPEQDTRSYMKQILEALAFLHDHNITHLDLKP 139
+ + L+LE P G + R + EQ T +Y+ ++ AL++ H + H D+KP
Sbjct: 82 FHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKRVIHRDIKP 141
Query: 140 QNILLTKDNNIKLCDFGISRVVNDVVEVKEIIGTPDYVAPEVLSYEPISLATDMWSVGVL 199
+N+LL +K+ DFG S V + GT DY+ PE++ D+WS+GVL
Sbjct: 142 ENLLLGSAGELKIADFGWS-VHAPSSRRTTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVL 200
Query: 200 AYVLLSSHSPFAGDNKQETFLNISQCNFSFHEDLFGHISSQAKDFIQSCLVTDP 253
Y L PF + QET+ IS+ F+F + ++ A+D I L +P
Sbjct: 201 CYEFLVGKPPFEANTYQETYKRISRVEFTFPD----FVTEGARDLISRLLKHNP 250
>pdb|3MVJ|A Chain A, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
pdb|3MVJ|B Chain B, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
pdb|3MVJ|E Chain E, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
Length = 371
Score = 102 bits (255), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 67/232 (28%), Positives = 113/232 (48%), Gaps = 8/232 (3%)
Query: 22 GKFASVRKCTHKITKVEYAAKFIRKRRR-SMDQMQDILHEAAVLYLAQKSERIVGLHEIY 80
G F V HK T YA K + K++ + Q++ L+E +L A +V L +
Sbjct: 73 GSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQ-AVNFPFLVKLEFSF 131
Query: 81 ETPHEMVLVLEMVPDGELQRLVDIQDGIPEQDTRSYMKQILEALAFLHDHNITHLDLKPQ 140
+ + +V+E VP GE+ + E R Y QI+ +LH ++ + DLKP+
Sbjct: 132 KDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPE 191
Query: 141 NILLTKDNNIKLCDFGISRVVNDVVEVKEIIGTPDYVAPEVLSYEPISLATDMWSVGVLA 200
N+L+ + I++ DFG ++ V + GTP+Y+APE++ + + A D W++GVL
Sbjct: 192 NLLIDQQGYIQVTDFGFAKRVKG--RTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLI 249
Query: 201 YVLLSSHSPFAGDNKQETFLNISQCNFSFHEDLFGHISSQAKDFIQSCLVTD 252
Y + + + PF D + + I F H SS KD +++ L D
Sbjct: 250 YEMAAGYPPFFADQPIQIYEKIVSGKVRFPS----HFSSDLKDLLRNLLQVD 297
>pdb|2JDO|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With
Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl) Amide
pdb|2JDR|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With The Inhibitor
A- 443654
pdb|2UW9|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With 4-(4-Chloro-
Phenyl)-4-(4-(1h-Pyrazol-4-Yl)-Phenyl)-Piperidine
pdb|2X39|A Chain A, Structure Of
4-Amino-N-(4-Chlorobenzyl)-1-(7h-Pyrrolo(2,3-D)
Pyrimidin-4-Yl)piperidine-4-Carboxamide Bound To Pkb
pdb|2XH5|A Chain A, Structure Of 4-(4-Tert-Butylbenzyl)-1-(7h-Pyrrolo(2,3-D)
Pyrimidin-4-Yl)piperidin-4-Amine Bound To Pkb
Length = 342
Score = 102 bits (255), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 69/236 (29%), Positives = 112/236 (47%), Gaps = 7/236 (2%)
Query: 20 SRGKFASVRKCTHKITKVEYAAKFIRKRRR-SMDQMQDILHEAAVLYLAQKSERIVGLHE 78
+G F V K T YA K +RK + D++ + E+ VL + + L
Sbjct: 19 GKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQ-NTRHPFLTALKY 77
Query: 79 IYETPHEMVLVLEMVPDGELQRLVDIQDGIPEQDTRSYMKQILEALAFLHDHNITHLDLK 138
++T + V+E GEL + + E+ R Y +I+ AL +LH ++ + D+K
Sbjct: 78 AFQTHDRLCFVMEYANGGELFFHLSRERVFTEERARFYGAEIVSALEYLHSRDVVYRDIK 137
Query: 139 PQNILLTKDNNIKLCDFGISR-VVNDVVEVKEIIGTPDYVAPEVLSYEPISLATDMWSVG 197
+N++L KD +IK+ DFG+ + ++D +K GTP+Y+APEVL A D W +G
Sbjct: 138 LENLMLDKDGHIKITDFGLCKEGISDGATMKXFCGTPEYLAPEVLEDNDYGRAVDWWGLG 197
Query: 198 VLAYVLLSSHSPFAGDNKQETFLNISQCNFSFHEDLFGHISSQAKDFIQSCLVTDP 253
V+ Y ++ PF + + F I F L S +AK + L DP
Sbjct: 198 VVMYEMMCGRLPFYNQDHERLFELILMEEIRFPRTL----SPEAKSLLAGLLKKDP 249
>pdb|3AGM|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-670
pdb|3L9L|A Chain A, Crystal Structure Of Pka With Compound 36
pdb|3L9L|B Chain B, Crystal Structure Of Pka With Compound 36
pdb|3OOG|A Chain A, Human Camp-Dependent Protein Kinase In Complex With A
Small Fragment
pdb|3OVV|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3OWP|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3OXT|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3P0M|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3POO|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
Length = 351
Score = 102 bits (255), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 67/232 (28%), Positives = 113/232 (48%), Gaps = 8/232 (3%)
Query: 22 GKFASVRKCTHKITKVEYAAKFIRKRRR-SMDQMQDILHEAAVLYLAQKSERIVGLHEIY 80
G F V HK T YA K + K++ + Q++ L+E +L A +V L +
Sbjct: 53 GSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQ-AVNFPFLVKLEFSF 111
Query: 81 ETPHEMVLVLEMVPDGELQRLVDIQDGIPEQDTRSYMKQILEALAFLHDHNITHLDLKPQ 140
+ + +V+E VP GE+ + E R Y QI+ +LH ++ + DLKP+
Sbjct: 112 KDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPE 171
Query: 141 NILLTKDNNIKLCDFGISRVVNDVVEVKEIIGTPDYVAPEVLSYEPISLATDMWSVGVLA 200
N+L+ + I++ DFG ++ V + GTP+Y+APE++ + + A D W++GVL
Sbjct: 172 NLLIDQQGYIQVTDFGFAKRVKG--RTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLI 229
Query: 201 YVLLSSHSPFAGDNKQETFLNISQCNFSFHEDLFGHISSQAKDFIQSCLVTD 252
Y + + + PF D + + I F H SS KD +++ L D
Sbjct: 230 YEMAAGYPPFFADQPIQIYEKIVSGKVRFP----SHFSSDLKDLLRNLLQVD 277
>pdb|4AE9|A Chain A, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2
pdb|4AE9|B Chain B, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2
Length = 343
Score = 102 bits (254), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 67/232 (28%), Positives = 113/232 (48%), Gaps = 8/232 (3%)
Query: 22 GKFASVRKCTHKITKVEYAAKFIRKRRR-SMDQMQDILHEAAVLYLAQKSERIVGLHEIY 80
G F V HK T YA K + K++ + Q++ L+E +L A +V L +
Sbjct: 45 GSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQ-AVNFPFLVKLEFSF 103
Query: 81 ETPHEMVLVLEMVPDGELQRLVDIQDGIPEQDTRSYMKQILEALAFLHDHNITHLDLKPQ 140
+ + +V+E VP GE+ + E R Y QI+ +LH ++ + DLKP+
Sbjct: 104 KDNSNLYMVMEYVPGGEMFSHLRRIGRFXEPHARFYAAQIVLTFEYLHSLDLIYRDLKPE 163
Query: 141 NILLTKDNNIKLCDFGISRVVNDVVEVKEIIGTPDYVAPEVLSYEPISLATDMWSVGVLA 200
N+L+ + I++ DFG ++ V + GTP+Y+APE++ + + A D W++GVL
Sbjct: 164 NLLIDQQGYIQVTDFGFAKRVKG--RTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLI 221
Query: 201 YVLLSSHSPFAGDNKQETFLNISQCNFSFHEDLFGHISSQAKDFIQSCLVTD 252
Y + + + PF D + + I F H SS KD +++ L D
Sbjct: 222 YEMAAGYPPFFADQPIQIYEKIVSGKVRFP----SHFSSDLKDLLRNLLQVD 269
>pdb|3UNZ|A Chain A, Aurora A In Complex With Rpm1679
pdb|3UNZ|B Chain B, Aurora A In Complex With Rpm1679
pdb|3UO4|A Chain A, Aurora A In Complex With Rpm1680
pdb|3UO5|A Chain A, Aurora A In Complex With Yl1-038-31
pdb|3UO6|A Chain A, Aurora A In Complex With Yl5-083
pdb|3UO6|B Chain B, Aurora A In Complex With Yl5-083
pdb|3UOD|A Chain A, Aurora A In Complex With Rpm1693
pdb|3UOH|A Chain A, Aurora A In Complex With Rpm1722
pdb|3UOH|B Chain B, Aurora A In Complex With Rpm1722
pdb|3UOJ|A Chain A, Aurora A In Complex With Rpm1715
pdb|3UOJ|B Chain B, Aurora A In Complex With Rpm1715
pdb|3UOK|A Chain A, Aurora A In Complex With Yl5-81-1
pdb|3UOK|B Chain B, Aurora A In Complex With Yl5-81-1
pdb|3UOL|A Chain A, Aurora A In Complex With So2-162
pdb|3UOL|B Chain B, Aurora A In Complex With So2-162
pdb|3UP2|A Chain A, Aurora A In Complex With Rpm1686
pdb|3UP7|A Chain A, Aurora A In Complex With Yl1-038-09
pdb|4DEA|A Chain A, Aurora A In Complex With Yl1-038-18
pdb|4DEB|A Chain A, Aurora A In Complex With Rk2-17-01
pdb|4DED|A Chain A, Aurora A In Complex With Yl1-038-21
pdb|4DEE|A Chain A, Aurora A In Complex With Adp
Length = 279
Score = 102 bits (254), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 66/234 (28%), Positives = 109/234 (46%), Gaps = 5/234 (2%)
Query: 20 SRGKFASVRKCTHKITKVEYAAKFIRKRRRSMDQMQDILHEAAVLYLAQKSERIVGLHEI 79
+GKF +V K +K A K + K + ++ L + + I+ L+
Sbjct: 18 GKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGY 77
Query: 80 YETPHEMVLVLEMVPDGELQRLVDIQDGIPEQDTRSYMKQILEALAFLHDHNITHLDLKP 139
+ + L+LE P G + R + EQ T +Y+ ++ AL++ H + H D+KP
Sbjct: 78 FHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKRVIHRDIKP 137
Query: 140 QNILLTKDNNIKLCDFGISRVVNDVVEVKEIIGTPDYVAPEVLSYEPISLATDMWSVGVL 199
+N+LL +K+ DFG S V + GT DY+ PE++ D+WS+GVL
Sbjct: 138 ENLLLGSAGELKIADFGWS-VHAPSSRRDTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVL 196
Query: 200 AYVLLSSHSPFAGDNKQETFLNISQCNFSFHEDLFGHISSQAKDFIQSCLVTDP 253
Y L PF + QET+ IS+ F+F + ++ A+D I L +P
Sbjct: 197 CYEFLVGKPPFEANTYQETYKRISRVEFTFPD----FVTEGARDLISRLLKHNP 246
>pdb|3NX8|A Chain A, Human Camp Dependent Protein Kinase In Complex With Phenol
Length = 351
Score = 102 bits (254), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 67/232 (28%), Positives = 113/232 (48%), Gaps = 8/232 (3%)
Query: 22 GKFASVRKCTHKITKVEYAAKFIRKRRR-SMDQMQDILHEAAVLYLAQKSERIVGLHEIY 80
G F V HK T YA K + K++ + Q++ L+E +L A +V L +
Sbjct: 53 GSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQ-AVNFPFLVKLEFSF 111
Query: 81 ETPHEMVLVLEMVPDGELQRLVDIQDGIPEQDTRSYMKQILEALAFLHDHNITHLDLKPQ 140
+ + +V+E VP GE+ + E R Y QI+ +LH ++ + DLKP+
Sbjct: 112 KDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPE 171
Query: 141 NILLTKDNNIKLCDFGISRVVNDVVEVKEIIGTPDYVAPEVLSYEPISLATDMWSVGVLA 200
N+L+ + I++ DFG ++ V + GTP+Y+APE++ + + A D W++GVL
Sbjct: 172 NLLIDQQGYIQVTDFGFAKRVKG--RTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLI 229
Query: 201 YVLLSSHSPFAGDNKQETFLNISQCNFSFHEDLFGHISSQAKDFIQSCLVTD 252
Y + + + PF D + + I F H SS KD +++ L D
Sbjct: 230 YEMAAGYPPFFADQPIQIYEKIVSGKVRFP----SHFSSDLKDLLRNLLQVD 277
>pdb|2F2U|A Chain A, Crystal Structure Of The Rho-Kinase Kinase Domain
pdb|2F2U|B Chain B, Crystal Structure Of The Rho-Kinase Kinase Domain
pdb|2H9V|A Chain A, Structural Basis For Induced-Fit Binding Of Rho-Kinase To
The Inhibitor Y27632
Length = 402
Score = 102 bits (254), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 71/239 (29%), Positives = 114/239 (47%), Gaps = 11/239 (4%)
Query: 20 SRGKFASVRKCTHKITKVEYAAKFIRKRRRSMDQMQDILHEAAVLYLAQKSERIVGLHEI 79
RG F V+ HK ++ YA K + K E + S +V L
Sbjct: 84 GRGAFGEVQLVRHKASQKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQLFCA 143
Query: 80 YETPHEMVLVLEMVPDGELQRLVDIQDGIPEQDTRSYMKQILEALAFLHDHNITHLDLKP 139
++ + +V+E +P G+L L+ D +PE+ + Y +++ AL +H + H D+KP
Sbjct: 144 FQDDKYLYMVMEYMPGGDLVNLMSNYD-VPEKWAKFYTAEVVLALDAIHSMGLIHRDVKP 202
Query: 140 QNILLTKDNNIKLCDFGISRVVND--VVEVKEIIGTPDYVAPEVLSYEP----ISLATDM 193
N+LL K ++KL DFG +++ +V +GTPDY++PEVL + D
Sbjct: 203 DNMLLDKHGHLKLADFGTCMKMDETGMVHCDTAVGTPDYISPEVLKSQGGDGYYGRECDW 262
Query: 194 WSVGVLAYVLLSSHSPFAGDNKQETFLNI--SQCNFSFHEDLFGHISSQAKDFIQSCLV 250
WSVGV + +L +PF D+ T+ I + + F ED IS AK+ I + L
Sbjct: 263 WSVGVFLFEMLVGDTPFYADSLVGTYSKIMDHKNSLCFPED--AEISKHAKNLICAFLT 319
>pdb|2BMC|A Chain A, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|B Chain B, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|C Chain C, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|D Chain D, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|E Chain E, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|F Chain F, Aurora-2 T287d T288d Complexed With Pha-680632
Length = 306
Score = 102 bits (254), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 66/234 (28%), Positives = 110/234 (47%), Gaps = 5/234 (2%)
Query: 20 SRGKFASVRKCTHKITKVEYAAKFIRKRRRSMDQMQDILHEAAVLYLAQKSERIVGLHEI 79
+GKF +V K +K A K + K + ++ L + + I+ L+
Sbjct: 43 GKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGY 102
Query: 80 YETPHEMVLVLEMVPDGELQRLVDIQDGIPEQDTRSYMKQILEALAFLHDHNITHLDLKP 139
+ + L+LE P G + R + EQ T +Y+ ++ AL++ H + H D+KP
Sbjct: 103 FHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKRVIHRDIKP 162
Query: 140 QNILLTKDNNIKLCDFGISRVVNDVVEVKEIIGTPDYVAPEVLSYEPISLATDMWSVGVL 199
+N+LL +K+ DFG S V ++ GT DY+ PE++ D+WS+GVL
Sbjct: 163 ENLLLGSAGELKIADFGWS-VHAPSSRRDDLCGTLDYLPPEMIEGRMHDEKVDLWSLGVL 221
Query: 200 AYVLLSSHSPFAGDNKQETFLNISQCNFSFHEDLFGHISSQAKDFIQSCLVTDP 253
Y L PF + QET+ IS+ F+F + ++ A+D I L +P
Sbjct: 222 CYEFLVGKPPFEANTYQETYKRISRVEFTFPD----FVTEGARDLISRLLKHNP 271
>pdb|2WQE|A Chain A, Structure Of S155r Aurora-A Somatic Mutant
Length = 262
Score = 102 bits (253), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 66/234 (28%), Positives = 108/234 (46%), Gaps = 5/234 (2%)
Query: 20 SRGKFASVRKCTHKITKVEYAAKFIRKRRRSMDQMQDILHEAAVLYLAQKSERIVGLHEI 79
+GKF +V K K A K + K + ++ L + + I+ L+
Sbjct: 14 GKGKFGNVYLAREKQRKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGY 73
Query: 80 YETPHEMVLVLEMVPDGELQRLVDIQDGIPEQDTRSYMKQILEALAFLHDHNITHLDLKP 139
+ + L+LE P G + R + EQ T +Y+ ++ AL++ H + H D+KP
Sbjct: 74 FHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKRVIHRDIKP 133
Query: 140 QNILLTKDNNIKLCDFGISRVVNDVVEVKEIIGTPDYVAPEVLSYEPISLATDMWSVGVL 199
+N+LL +K+ DFG S V + GT DY+ PE++ D+WS+GVL
Sbjct: 134 ENLLLGSAGELKIADFGWS-VHAPSSRRTTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVL 192
Query: 200 AYVLLSSHSPFAGDNKQETFLNISQCNFSFHEDLFGHISSQAKDFIQSCLVTDP 253
Y L PF + QET+ IS+ F+F + ++ A+D I L +P
Sbjct: 193 CYEFLVGKPPFEANTYQETYKRISRVEFTFPD----FVTEGARDLISRLLKHNP 242
>pdb|1MUO|A Chain A, Crystal Structure Of Aurora-2, An Oncogenic Serine-
Threonine Kinase
Length = 297
Score = 102 bits (253), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 66/234 (28%), Positives = 109/234 (46%), Gaps = 5/234 (2%)
Query: 20 SRGKFASVRKCTHKITKVEYAAKFIRKRRRSMDQMQDILHEAAVLYLAQKSERIVGLHEI 79
+GKF +V K +K A K + K + ++ L + + I+ L+
Sbjct: 34 GKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGY 93
Query: 80 YETPHEMVLVLEMVPDGELQRLVDIQDGIPEQDTRSYMKQILEALAFLHDHNITHLDLKP 139
+ + L+LE P G + R + EQ T +Y+ ++ AL++ H + H D+KP
Sbjct: 94 FHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKRVIHRDIKP 153
Query: 140 QNILLTKDNNIKLCDFGISRVVNDVVEVKEIIGTPDYVAPEVLSYEPISLATDMWSVGVL 199
+N+LL +K+ DFG S V + GT DY+ PE++ D+WS+GVL
Sbjct: 154 ENLLLGSAGELKIADFGWS-VHAPSSRRTTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVL 212
Query: 200 AYVLLSSHSPFAGDNKQETFLNISQCNFSFHEDLFGHISSQAKDFIQSCLVTDP 253
Y L PF + QET+ IS+ F+F + ++ A+D I L +P
Sbjct: 213 CYEFLVGKPPFEANTYQETYKRISRVEFTFPD----FVTEGARDLISRLLKHNP 262
>pdb|3UBD|A Chain A, Structure Of N-Terminal Domain Of Rsk2 Kinase In Complex
With Flavonoid Glycoside Sl0101
Length = 304
Score = 102 bits (253), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 72/246 (29%), Positives = 125/246 (50%), Gaps = 18/246 (7%)
Query: 15 IFCMPSRGKFASVRKCTHKITKVEYAAKFIRK-----RRRSMDQMQ-DILHEAAVLYLAQ 68
+ S GK V+K + + YA K ++K R R +M+ DIL E +
Sbjct: 31 VLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRVRTKMERDILVEVNHPF--- 87
Query: 69 KSERIVGLHEIYETPHEMVLVLEMVPDGELQRLVDIQDGIPEQDTRSYMKQILEALAFLH 128
IV LH ++T ++ L+L+ + G+L + + E+D + Y+ ++ AL LH
Sbjct: 88 ----IVKLHYAFQTEGKLYLILDFLRGGDLFTRLSKEVMFTEEDVKFYLAELALALDHLH 143
Query: 129 DHNITHLDLKPQNILLTKDNNIKLCDFGISR-VVNDVVEVKEIIGTPDYVAPEVLSYEPI 187
I + DLKP+NILL ++ +IKL DFG+S+ ++ + GT +Y+APEV++
Sbjct: 144 SLGIIYRDLKPENILLDEEGHIKLTDFGLSKESIDHEKKAYSFCGTVEYMAPEVVNRRGH 203
Query: 188 SLATDMWSVGVLAYVLLSSHSPFAGDNKQETFLNISQCNFSFHEDLFGHISSQAKDFIQS 247
+ + D WS GVL + +L+ PF G +++ET I + + L S +A+ ++
Sbjct: 204 TQSADWWSFGVLMFEMLTGTLPFQGKDRKETMTMILKAKLGMPQFL----SPEAQSLLRM 259
Query: 248 CLVTDP 253
+P
Sbjct: 260 LFKRNP 265
>pdb|3L9M|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 18
pdb|3L9M|B Chain B, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 18
pdb|3L9N|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 27
Length = 351
Score = 101 bits (252), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 66/232 (28%), Positives = 112/232 (48%), Gaps = 8/232 (3%)
Query: 22 GKFASVRKCTHKITKVEYAAKFIRKRRR-SMDQMQDILHEAAVLYLAQKSERIVGLHEIY 80
G F V HK T YA K + K++ + Q++ L+E +L A +V L +
Sbjct: 53 GSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQ-AVNFPFLVKLEFSF 111
Query: 81 ETPHEMVLVLEMVPDGELQRLVDIQDGIPEQDTRSYMKQILEALAFLHDHNITHLDLKPQ 140
+ + +V+E P GE+ + E R Y QI+ +LH ++ + DLKP+
Sbjct: 112 KDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPE 171
Query: 141 NILLTKDNNIKLCDFGISRVVNDVVEVKEIIGTPDYVAPEVLSYEPISLATDMWSVGVLA 200
N+++ + IK+ DFG ++ V + GTP+Y+APE++ + + A D W++GVL
Sbjct: 172 NLMIDQQGYIKVTDFGFAKRVKG--RTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLI 229
Query: 201 YVLLSSHSPFAGDNKQETFLNISQCNFSFHEDLFGHISSQAKDFIQSCLVTD 252
Y + + + PF D + + I F H SS KD +++ L D
Sbjct: 230 YEMAAGYPPFFADQPIQIYEKIVSGKVRFP----SHFSSDLKDLLRNLLQVD 277
>pdb|4EL9|A Chain A, Structure Of N-Terminal Kinase Domain Of Rsk2 With Afzelin
pdb|4GUE|A Chain A, Structure Of N-terminal Kinase Domain Of Rsk2 With
Flavonoid Glycoside Quercitrin
Length = 305
Score = 101 bits (252), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 72/246 (29%), Positives = 125/246 (50%), Gaps = 18/246 (7%)
Query: 15 IFCMPSRGKFASVRKCTHKITKVEYAAKFIRK-----RRRSMDQMQ-DILHEAAVLYLAQ 68
+ S GK V+K + + YA K ++K R R +M+ DIL E +
Sbjct: 32 VLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRVRTKMERDILVEVNHPF--- 88
Query: 69 KSERIVGLHEIYETPHEMVLVLEMVPDGELQRLVDIQDGIPEQDTRSYMKQILEALAFLH 128
IV LH ++T ++ L+L+ + G+L + + E+D + Y+ ++ AL LH
Sbjct: 89 ----IVKLHYAFQTEGKLYLILDFLRGGDLFTRLSKEVMFTEEDVKFYLAELALALDHLH 144
Query: 129 DHNITHLDLKPQNILLTKDNNIKLCDFGISR-VVNDVVEVKEIIGTPDYVAPEVLSYEPI 187
I + DLKP+NILL ++ +IKL DFG+S+ ++ + GT +Y+APEV++
Sbjct: 145 SLGIIYRDLKPENILLDEEGHIKLTDFGLSKESIDHEKKAYSFCGTVEYMAPEVVNRRGH 204
Query: 188 SLATDMWSVGVLAYVLLSSHSPFAGDNKQETFLNISQCNFSFHEDLFGHISSQAKDFIQS 247
+ + D WS GVL + +L+ PF G +++ET I + + L S +A+ ++
Sbjct: 205 TQSADWWSFGVLMFEMLTGTLPFQGKDRKETMTMILKAKLGMPQFL----SPEAQSLLRM 260
Query: 248 CLVTDP 253
+P
Sbjct: 261 LFKRNP 266
>pdb|3ZGW|A Chain A, Crystal Structure Of Maternal Embryonic Leucine Zipper
Kinase (melk) In Complex With Amp-pnp
Length = 347
Score = 101 bits (252), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 71/235 (30%), Positives = 116/235 (49%), Gaps = 9/235 (3%)
Query: 22 GKFASVRKCTHKITKVEYAAKFIRKRRRSMDQMQDILHEAAVLYLAQKSERIVGLHEIYE 81
G FA V+ H +T A K + K D + I E L + + I L+ + E
Sbjct: 21 GGFAKVKLACHILTGEMVAIKIMDKNTLGSD-LPRIKTEIEALK-NLRHQHICQLYHVLE 78
Query: 82 TPHEMVLVLEMVPDGELQRLVDIQDGIPEQDTRSYMKQILEALAFLHDHNITHLDLKPQN 141
T +++ +VLE P GEL + QD + E++TR +QI+ A+A++H H DLKP+N
Sbjct: 79 TANKIFMVLEYCPGGELFDYIISQDRLSEEETRVVFRQIVSAVAYVHSQGYAHRDLKPEN 138
Query: 142 ILLTKDNNIKLCDFGISRVV--NDVVEVKEIIGTPDYVAPEVLSYEP-ISLATDMWSVGV 198
+L + + +KL DFG+ N ++ G+ Y APE++ + + D+WS+G+
Sbjct: 139 LLFDEYHKLKLIDFGLCAKPKGNKDYHLQTCCGSLAYAAPELIQGKSYLGSEADVWSMGI 198
Query: 199 LAYVLLSSHSPFAGDNKQETFLNISQCNFSFHEDLFGHISSQAKDFIQSCLVTDP 253
L YVL+ PF DN + I + + D+ +S + +Q L DP
Sbjct: 199 LLYVLMCGFLPFDDDNVMALYKKIMRGKY----DVPKWLSPSSILLLQQMLQVDP 249
>pdb|2GNJ|A Chain A, Pka Three Fold Mutant Model Of Rho-Kinase With Y-27632
pdb|2GNL|A Chain A, Pka Threefold Mutant Model Of Rho-Kinase With Inhibitor H-
1152p
Length = 350
Score = 101 bits (252), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 67/232 (28%), Positives = 112/232 (48%), Gaps = 8/232 (3%)
Query: 22 GKFASVRKCTHKITKVEYAAKFIRKRRR-SMDQMQDILHEAAVLYLAQKSERIVGLHEIY 80
G F V H T YA K + K++ + Q++ L+E +L A +V L +
Sbjct: 52 GSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQ-AVNFPFLVKLEFSF 110
Query: 81 ETPHEMVLVLEMVPDGELQRLVDIQDGIPEQDTRSYMKQILEALAFLHDHNITHLDLKPQ 140
+ + +V+E VP GE+ + E R Y QI+ +LH ++ + DLKP+
Sbjct: 111 KDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPE 170
Query: 141 NILLTKDNNIKLCDFGISRVVNDVVEVKEIIGTPDYVAPEVLSYEPISLATDMWSVGVLA 200
N+L+ + IK+ DFG ++ V + GTP+Y+APE++ + + A D W++GVL
Sbjct: 171 NLLIDQQGYIKVADFGFAKRVKG--RTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLI 228
Query: 201 YVLLSSHSPFAGDNKQETFLNISQCNFSFHEDLFGHISSQAKDFIQSCLVTD 252
Y + + + PF D + + I F H SS KD +++ L D
Sbjct: 229 YEMAAGYPPFFADQPIQIYEKIVSGKVRFP----SHFSSDLKDLLRNLLQVD 276
>pdb|2J4Z|A Chain A, Structure Of Aurora-2 In Complex With Pha-680626
pdb|2J4Z|B Chain B, Structure Of Aurora-2 In Complex With Pha-680626
Length = 306
Score = 101 bits (252), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 66/234 (28%), Positives = 109/234 (46%), Gaps = 5/234 (2%)
Query: 20 SRGKFASVRKCTHKITKVEYAAKFIRKRRRSMDQMQDILHEAAVLYLAQKSERIVGLHEI 79
+GKF +V K +K A K + K + ++ L + + I+ L+
Sbjct: 43 GKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGY 102
Query: 80 YETPHEMVLVLEMVPDGELQRLVDIQDGIPEQDTRSYMKQILEALAFLHDHNITHLDLKP 139
+ + L+LE P G + R + EQ T +Y+ ++ AL++ H + H D+KP
Sbjct: 103 FHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKRVIHRDIKP 162
Query: 140 QNILLTKDNNIKLCDFGISRVVNDVVEVKEIIGTPDYVAPEVLSYEPISLATDMWSVGVL 199
+N+LL +K+ DFG S V + GT DY+ PE++ D+WS+GVL
Sbjct: 163 ENLLLGSAGELKIADFGWS-VHAPSSRRTTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVL 221
Query: 200 AYVLLSSHSPFAGDNKQETFLNISQCNFSFHEDLFGHISSQAKDFIQSCLVTDP 253
Y L PF + QET+ IS+ F+F + ++ A+D I L +P
Sbjct: 222 CYEFLVGKPPFEANTYQETYKRISRVEFTFPD----FVTEGARDLISRLLKHNP 271
>pdb|1CTP|E Chain E, Structure Of The Mammalian Catalytic Subunit Of
Camp-Dependent Protein Kinase And An Inhibitor Peptide
Displays An Open Conformation
Length = 350
Score = 101 bits (252), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 66/232 (28%), Positives = 113/232 (48%), Gaps = 8/232 (3%)
Query: 22 GKFASVRKCTHKITKVEYAAKFIRKRRR-SMDQMQDILHEAAVLYLAQKSERIVGLHEIY 80
G F V HK T +A K + K++ + Q++ L+E +L A +V L +
Sbjct: 52 GSFGRVMLVKHKETGNHFAMKILDKQKVVKLKQIEHTLNEKRILQ-AVNFPFLVKLEYSF 110
Query: 81 ETPHEMVLVLEMVPDGELQRLVDIQDGIPEQDTRSYMKQILEALAFLHDHNITHLDLKPQ 140
+ + +V+E VP GE+ + E R Y QI+ +LH ++ + DLKP+
Sbjct: 111 KDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPE 170
Query: 141 NILLTKDNNIKLCDFGISRVVNDVVEVKEIIGTPDYVAPEVLSYEPISLATDMWSVGVLA 200
N+L+ + I++ DFG ++ V + GTP+Y+APE++ + + A D W++GVL
Sbjct: 171 NLLIDQQGYIQVTDFGFAKRVKG--RTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLI 228
Query: 201 YVLLSSHSPFAGDNKQETFLNISQCNFSFHEDLFGHISSQAKDFIQSCLVTD 252
Y + + + PF D + + I F H SS KD +++ L D
Sbjct: 229 YEMAAGYPPFFADQPIQIYEKIVSGKVRFP----SHFSSDLKDLLRNLLQVD 276
>pdb|3COH|A Chain A, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
pdb|3COH|B Chain B, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
Length = 268
Score = 101 bits (251), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 65/234 (27%), Positives = 109/234 (46%), Gaps = 5/234 (2%)
Query: 20 SRGKFASVRKCTHKITKVEYAAKFIRKRRRSMDQMQDILHEAAVLYLAQKSERIVGLHEI 79
+GKF +V K +K A K + K + ++ L + + I+ L+
Sbjct: 17 GKGKFGNVYLAREKNSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGY 76
Query: 80 YETPHEMVLVLEMVPDGELQRLVDIQDGIPEQDTRSYMKQILEALAFLHDHNITHLDLKP 139
+ + L+LE P G + R + EQ T +Y+ ++ AL++ H + H D+KP
Sbjct: 77 FHDSTRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKKVIHRDIKP 136
Query: 140 QNILLTKDNNIKLCDFGISRVVNDVVEVKEIIGTPDYVAPEVLSYEPISLATDMWSVGVL 199
+N+LL +K+ DFG S V + GT DY+ PE++ D+WS+GVL
Sbjct: 137 ENLLLGSAGELKIADFGWS-VHAPSSRRAALCGTLDYLPPEMIEGRMHDEKVDLWSLGVL 195
Query: 200 AYVLLSSHSPFAGDNKQETFLNISQCNFSFHEDLFGHISSQAKDFIQSCLVTDP 253
Y L PF + Q+T+ IS+ F+F + ++ A+D I L +P
Sbjct: 196 CYEFLVGKPPFEANTYQDTYKRISRVEFTFPD----FVTEGARDLISRLLKHNP 245
>pdb|1CDK|A Chain A, Camp-Dependent Protein Kinase Catalytic Subunit
(E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein
Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24)
Isoelectric Variant Ca) And Mn2+ Adenylyl
Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c
pdb|1CDK|B Chain B, Camp-Dependent Protein Kinase Catalytic Subunit
(E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein
Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24)
Isoelectric Variant Ca) And Mn2+ Adenylyl
Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c
Length = 350
Score = 101 bits (251), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 66/232 (28%), Positives = 113/232 (48%), Gaps = 8/232 (3%)
Query: 22 GKFASVRKCTHKITKVEYAAKFIRKRRR-SMDQMQDILHEAAVLYLAQKSERIVGLHEIY 80
G F V HK T +A K + K++ + Q++ L+E +L A +V L +
Sbjct: 52 GSFGRVMLVKHKETGNHFAMKILDKQKVVKLKQIEHTLNEKRILQ-AVNFPFLVKLEYSF 110
Query: 81 ETPHEMVLVLEMVPDGELQRLVDIQDGIPEQDTRSYMKQILEALAFLHDHNITHLDLKPQ 140
+ + +V+E VP GE+ + E R Y QI+ +LH ++ + DLKP+
Sbjct: 111 KDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPE 170
Query: 141 NILLTKDNNIKLCDFGISRVVNDVVEVKEIIGTPDYVAPEVLSYEPISLATDMWSVGVLA 200
N+L+ + I++ DFG ++ V + GTP+Y+APE++ + + A D W++GVL
Sbjct: 171 NLLIDQQGYIQVTDFGFAKRVKG--RTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLI 228
Query: 201 YVLLSSHSPFAGDNKQETFLNISQCNFSFHEDLFGHISSQAKDFIQSCLVTD 252
Y + + + PF D + + I F H SS KD +++ L D
Sbjct: 229 YEMAAGYPPFFADQPIQIYEKIVSGKVRFP----SHFSSDLKDLLRNLLQVD 276
>pdb|3G51|A Chain A, Structural Diversity Of The Active Conformation Of The N-
Terminal Kinase Domain Of P90 Ribosomal S6 Kinase 2
Length = 325
Score = 101 bits (251), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 71/241 (29%), Positives = 124/241 (51%), Gaps = 18/241 (7%)
Query: 20 SRGKFASVRKCTHKITKVEYAAKFIRK-----RRRSMDQMQ-DILHEAAVLYLAQKSERI 73
S GK V+K + + YA K ++K R R +M+ DIL E + I
Sbjct: 36 SFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRVRTKMERDILVEVNHPF-------I 88
Query: 74 VGLHEIYETPHEMVLVLEMVPDGELQRLVDIQDGIPEQDTRSYMKQILEALAFLHDHNIT 133
V LH ++T ++ L+L+ + G+L + + E+D + Y+ ++ AL LH I
Sbjct: 89 VKLHYAFQTEGKLYLILDFLRGGDLFTRLSKEVMFTEEDVKFYLAELALALDHLHSLGII 148
Query: 134 HLDLKPQNILLTKDNNIKLCDFGISR-VVNDVVEVKEIIGTPDYVAPEVLSYEPISLATD 192
+ DLKP+NILL ++ +IKL DFG+S+ ++ + GT +Y+APEV++ + + D
Sbjct: 149 YRDLKPENILLDEEGHIKLTDFGLSKESIDHEKKAYSFCGTVEYMAPEVVNRRGHTQSAD 208
Query: 193 MWSVGVLAYVLLSSHSPFAGDNKQETFLNISQCNFSFHEDLFGHISSQAKDFIQSCLVTD 252
WS GVL + +L+ PF G +++ET I + + +S +A+ ++ +
Sbjct: 209 WWSFGVLMFEMLTGTLPFQGKDRKETMTMILKAKLGMPQ----FLSPEAQSLLRMLFKRN 264
Query: 253 P 253
P
Sbjct: 265 P 265
>pdb|3QFV|A Chain A, Mrck Beta In Complex With Tpca-1
pdb|3QFV|B Chain B, Mrck Beta In Complex With Tpca-1
Length = 415
Score = 101 bits (251), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 72/249 (28%), Positives = 116/249 (46%), Gaps = 25/249 (10%)
Query: 20 SRGKFASVRKCTHKITKVEYAAKFIRKRRRSMDQMQDILHEAAVLYLAQKSERIVGLHEI 79
RG F V K T+ YA K + K E + + + I LH
Sbjct: 83 GRGAFGEVAVVKMKNTERIYAMKILNKWEMLKRAETACFREERDVLVNGDCQWITALHYA 142
Query: 80 YETPHEMVLVLEMVPDGELQRLVD-IQDGIPEQDTRSYMKQILEALAFLHDHNITHLDLK 138
++ + + LV++ G+L L+ +D +PE R Y+ +++ A+ +H + H D+K
Sbjct: 143 FQDENHLYLVMDYYVGGDLLTLLSKFEDKLPEDMARFYIGEMVLAIDSIHQLHYVHRDIK 202
Query: 139 PQNILLTKDNNIKLCDFGISRVVND--VVEVKEIIGTPDYVAPEVL--------SYEPIS 188
P N+LL + +I+L DFG +ND V+ +GTPDY++PE+L Y P
Sbjct: 203 PDNVLLDVNGHIRLADFGSCLKMNDDGTVQSSVAVGTPDYISPEILQAMEDGMGKYGP-- 260
Query: 189 LATDMWSVGVLAYVLLSSHSPFAGDNKQETFLNISQCNFSFHEDLF------GHISSQAK 242
D WS+GV Y +L +PF ++ ET+ I HE+ F +S +AK
Sbjct: 261 -ECDWWSLGVCMYEMLYGETPFYAESLVETYGKIMN-----HEERFQFPSHVTDVSEEAK 314
Query: 243 DFIQSCLVT 251
D IQ + +
Sbjct: 315 DLIQRLICS 323
>pdb|1CMK|E Chain E, Crystal Structures Of The Myristylated Catalytic Subunit
Of Camp- Dependent Protein Kinase Reveal Open And Closed
Conformations
Length = 350
Score = 101 bits (251), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 66/232 (28%), Positives = 113/232 (48%), Gaps = 8/232 (3%)
Query: 22 GKFASVRKCTHKITKVEYAAKFIRKRRR-SMDQMQDILHEAAVLYLAQKSERIVGLHEIY 80
G F V HK T +A K + K++ + Q++ L+E +L A +V L +
Sbjct: 52 GSFGRVMLVKHKETGNHFAMKILDKQKVVKLKQIEHTLNEKRILQ-AVNFPFLVKLEYSF 110
Query: 81 ETPHEMVLVLEMVPDGELQRLVDIQDGIPEQDTRSYMKQILEALAFLHDHNITHLDLKPQ 140
+ + +V+E VP GE+ + E R Y QI+ +LH ++ + DLKP+
Sbjct: 111 KDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPE 170
Query: 141 NILLTKDNNIKLCDFGISRVVNDVVEVKEIIGTPDYVAPEVLSYEPISLATDMWSVGVLA 200
N+L+ + I++ DFG ++ V + GTP+Y+APE++ + + A D W++GVL
Sbjct: 171 NLLIDQQGYIQVTDFGFAKRVKG--RTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLI 228
Query: 201 YVLLSSHSPFAGDNKQETFLNISQCNFSFHEDLFGHISSQAKDFIQSCLVTD 252
Y + + + PF D + + I F H SS KD +++ L D
Sbjct: 229 YEMAAGYPPFFADQPIQIYEKIVSGKVRFP----SHFSSDLKDLLRNLLQVD 276
>pdb|3TKU|A Chain A, Mrck Beta In Complex With Fasudil
pdb|3TKU|B Chain B, Mrck Beta In Complex With Fasudil
Length = 433
Score = 101 bits (251), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 72/249 (28%), Positives = 116/249 (46%), Gaps = 25/249 (10%)
Query: 20 SRGKFASVRKCTHKITKVEYAAKFIRKRRRSMDQMQDILHEAAVLYLAQKSERIVGLHEI 79
RG F V K T+ YA K + K E + + + I LH
Sbjct: 99 GRGAFGEVAVVKMKNTERIYAMKILNKWEMLKRAETACFREERDVLVNGDCQWITALHYA 158
Query: 80 YETPHEMVLVLEMVPDGELQRLVD-IQDGIPEQDTRSYMKQILEALAFLHDHNITHLDLK 138
++ + + LV++ G+L L+ +D +PE R Y+ +++ A+ +H + H D+K
Sbjct: 159 FQDENHLYLVMDYYVGGDLLTLLSKFEDKLPEDMARFYIGEMVLAIDSIHQLHYVHRDIK 218
Query: 139 PQNILLTKDNNIKLCDFGISRVVND--VVEVKEIIGTPDYVAPEVL--------SYEPIS 188
P N+LL + +I+L DFG +ND V+ +GTPDY++PE+L Y P
Sbjct: 219 PDNVLLDVNGHIRLADFGSCLKMNDDGTVQSSVAVGTPDYISPEILQAMEDGMGKYGP-- 276
Query: 189 LATDMWSVGVLAYVLLSSHSPFAGDNKQETFLNISQCNFSFHEDLF------GHISSQAK 242
D WS+GV Y +L +PF ++ ET+ I HE+ F +S +AK
Sbjct: 277 -ECDWWSLGVCMYEMLYGETPFYAESLVETYGKIMN-----HEERFQFPSHVTDVSEEAK 330
Query: 243 DFIQSCLVT 251
D IQ + +
Sbjct: 331 DLIQRLICS 339
>pdb|1VZO|A Chain A, The Structure Of The N-Terminal Kinase Domain Of Msk1
Reveals A Novel Autoinhibitory Conformation For A Dual
Kinase Protein
Length = 355
Score = 101 bits (251), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 73/245 (29%), Positives = 123/245 (50%), Gaps = 6/245 (2%)
Query: 15 IFCMPSRGKFASVRKCTHKITKVEYAAKFIRKRR--RSMDQMQDILHEAAVLYLAQKSER 72
+ + GK VRK + T YA K ++K + + E VL ++S
Sbjct: 61 VLGTGAYGKVFLVRKISGHDTGKLYAMKVLKKATIVQKAKTTEHTRTERQVLEHIRQSPF 120
Query: 73 IVGLHEIYETPHEMVLVLEMVPDGELQRLVDIQDGIPEQDTRSYMKQILEALAFLHDHNI 132
+V LH ++T ++ L+L+ + GEL + ++ E + + Y+ +I+ AL LH I
Sbjct: 121 LVTLHYAFQTETKLHLILDYINGGELFTHLSQRERFTEHEVQIYVGEIVLALEHLHKLGI 180
Query: 133 THLDLKPQNILLTKDNNIKLCDFGISR--VVNDVVEVKEIIGTPDYVAPEVLSYEPIS-- 188
+ D+K +NILL + ++ L DFG+S+ V ++ + GT +Y+AP+++
Sbjct: 181 IYRDIKLENILLDSNGHVVLTDFGLSKEFVADETERAYDFCGTIEYMAPDIVRGGDSGHD 240
Query: 189 LATDMWSVGVLAYVLLSSHSPFAGDNKQETFLNISQCNFSFHEDLFGHISSQAKDFIQSC 248
A D WS+GVL Y LL+ SPF D ++ + IS+ +S+ AKD IQ
Sbjct: 241 KAVDWWSLGVLMYELLTGASPFTVDGEKNSQAEISRRILKSEPPYPQEMSALAKDLIQRL 300
Query: 249 LVTDP 253
L+ DP
Sbjct: 301 LMKDP 305
>pdb|3IS5|A Chain A, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|B Chain B, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|C Chain C, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|D Chain D, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|E Chain E, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|F Chain F, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
Length = 285
Score = 101 bits (251), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 75/243 (30%), Positives = 117/243 (48%), Gaps = 19/243 (7%)
Query: 22 GKFASVRKCTHKITKVEYAAKFIRKRRRSMDQMQDILHEAAVLYLAQKSERIVGLHEIYE 81
G F V + + +E K I K R S M+ I E VL + I+ + E++E
Sbjct: 33 GAFGDVHLVEERSSGLERVIKTINKDR-SQVPMEQIEAEIEVLK-SLDHPNIIKIFEVFE 90
Query: 82 TPHEMVLVLEMVPDGEL-QRLVDIQ---DGIPEQDTRSYMKQILEALAFLHDHNITHLDL 137
H M +V+E GEL +R+V Q + E MKQ++ ALA+ H ++ H DL
Sbjct: 91 DYHNMYIVMETCEGGELLERIVSAQARGKALSEGYVAELMKQMMNALAYFHSQHVVHKDL 150
Query: 138 KPQNILL---TKDNNIKLCDFGISRVVNDVVEVKEIIGTPDYVAPEVLSYEPISLATDMW 194
KP+NIL + + IK+ DFG++ + GT Y+APEV + ++ D+W
Sbjct: 151 KPENILFQDTSPHSPIKIIDFGLAELFKSDEHSTNAAGTALYMAPEVFKRD-VTFKCDIW 209
Query: 195 SVGVLAYVLLSSHSPFAGDNKQETFLNISQCNFSFHEDLFG----HISSQAKDFIQSCLV 250
S GV+ Y LL+ PF G + +E Q ++ E + ++ QA D ++ L
Sbjct: 210 SAGVVMYFLLTGCLPFTGTSLEEV-----QQKATYKEPNYAVECRPLTPQAVDLLKQMLT 264
Query: 251 TDP 253
DP
Sbjct: 265 KDP 267
>pdb|2XNE|A Chain A, Structure Of Aurora-A Bound To An Imidazopyrazine
Inhibitor
Length = 272
Score = 101 bits (251), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 65/234 (27%), Positives = 109/234 (46%), Gaps = 5/234 (2%)
Query: 20 SRGKFASVRKCTHKITKVEYAAKFIRKRRRSMDQMQDILHEAAVLYLAQKSERIVGLHEI 79
+GKF +V K +K A K + K + ++ L + + I+ L+
Sbjct: 20 GKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGY 79
Query: 80 YETPHEMVLVLEMVPDGELQRLVDIQDGIPEQDTRSYMKQILEALAFLHDHNITHLDLKP 139
+ + L+LE P G + R + EQ T +Y+ ++ AL++ H + H D+KP
Sbjct: 80 FHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKRVIHRDIKP 139
Query: 140 QNILLTKDNNIKLCDFGISRVVNDVVEVKEIIGTPDYVAPEVLSYEPISLATDMWSVGVL 199
+N+LL +K+ +FG S V + GT DY+ PE++ D+WS+GVL
Sbjct: 140 ENLLLGSAGELKIANFGWS-VHAPSSRRTTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVL 198
Query: 200 AYVLLSSHSPFAGDNKQETFLNISQCNFSFHEDLFGHISSQAKDFIQSCLVTDP 253
Y L PF + QET+ IS+ F+F + ++ A+D I L +P
Sbjct: 199 CYEFLVGKPPFEANTYQETYKRISRVEFTFPD----FVTEGARDLISRLLKHNP 248
>pdb|2AC5|A Chain A, Structure Of Human Mnk2 Kinase Domain Mutant D228g
pdb|2HW7|A Chain A, Crystal Structure Of Mnk2-D228g In Complex With
Staurosporine
Length = 316
Score = 101 bits (251), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 78/264 (29%), Positives = 118/264 (44%), Gaps = 33/264 (12%)
Query: 20 SRGKFASVRKCTHKITKVEYAAKFIRKRRRSMDQMQDILHEAAVLYLAQKSERIVGLHEI 79
G A V+ C + IT EYA K I K+ + + E +LY Q ++ L E
Sbjct: 22 GEGAHARVQTCINLITSQEYAVKIIEKQPGHIRSR--VFREVEMLYQCQGHRNVLELIEF 79
Query: 80 YETPHEMVLVLEMVPDGELQRLVDIQDGIPEQDTRSYMKQILEALAFLHDHNITHLDLKP 139
+E LV E + G + + + E + ++ + AL FLH+ I H DLKP
Sbjct: 80 FEEEDRFYLVFEKMRGGSILSHIHKRRHFNELEASVVVQDVASALDFLHNKGIAHRDLKP 139
Query: 140 QNILLTKDNN---IKLCDFGISRVVN--------DVVEVKEIIGTPDYVAPEVLSY--EP 186
+NIL N +K+CDFG+ + E+ G+ +Y+APEV+ E
Sbjct: 140 ENILCEHPNQVSPVKICDFGLGSGIKLNGDCSPISTPELLTPCGSAEYMAPEVVEAFSEE 199
Query: 187 ISL---ATDMWSVGVLAYVLLSSHSPFAGDNKQET---------------FLNISQCNFS 228
S+ D+WS+GV+ Y+LLS + PF G + F +I + +
Sbjct: 200 ASIYDKRCDLWSLGVILYILLSGYPPFVGRCGSDCGWDRGEACPACQNMLFESIQEGKYE 259
Query: 229 FHEDLFGHISSQAKDFIQSCLVTD 252
F + + HIS AKD I LV D
Sbjct: 260 FPDKDWAHISCAAKDLISKLLVRD 283
>pdb|3AMA|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With
Inhibitor Jnj- 7706621
pdb|3AMB|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With
Inhibitor Vx- 680
Length = 351
Score = 100 bits (250), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 67/232 (28%), Positives = 111/232 (47%), Gaps = 8/232 (3%)
Query: 22 GKFASVRKCTHKITKVEYAAKFIRKRRR-SMDQMQDILHEAAVLYLAQKSERIVGLHEIY 80
G F V HK T YA K + K++ + Q++ L+E + A +V L +
Sbjct: 53 GSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRIQQ-AVNFPFLVKLEFSF 111
Query: 81 ETPHEMVLVLEMVPDGELQRLVDIQDGIPEQDTRSYMKQILEALAFLHDHNITHLDLKPQ 140
+ + +VLE P GE+ + E R Y QI+ +LH ++ + DLKP+
Sbjct: 112 KDNSNLYMVLEYAPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPE 171
Query: 141 NILLTKDNNIKLCDFGISRVVNDVVEVKEIIGTPDYVAPEVLSYEPISLATDMWSVGVLA 200
N+L+ + IK+ DFG ++ V + GTP+Y+APE++ + + A D W++GVL
Sbjct: 172 NLLIDQQGYIKVADFGFAKRVKG--RTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLI 229
Query: 201 YVLLSSHSPFAGDNKQETFLNISQCNFSFHEDLFGHISSQAKDFIQSCLVTD 252
Y + + + PF D + + I F H SS KD +++ L D
Sbjct: 230 YEMAAGYPPFFADQPIQIYEKIVSGKVRFP----SHFSSDLKDLLRNLLQVD 277
>pdb|1OL6|A Chain A, Structure Of Unphosphorylated D274n Mutant Of Aurora-a
Length = 282
Score = 100 bits (250), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 65/234 (27%), Positives = 109/234 (46%), Gaps = 5/234 (2%)
Query: 20 SRGKFASVRKCTHKITKVEYAAKFIRKRRRSMDQMQDILHEAAVLYLAQKSERIVGLHEI 79
+GKF +V K +K A K + K + ++ L + + I+ L+
Sbjct: 19 GKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGY 78
Query: 80 YETPHEMVLVLEMVPDGELQRLVDIQDGIPEQDTRSYMKQILEALAFLHDHNITHLDLKP 139
+ + L+LE P G + R + EQ T +Y+ ++ AL++ H + H D+KP
Sbjct: 79 FHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKRVIHRDIKP 138
Query: 140 QNILLTKDNNIKLCDFGISRVVNDVVEVKEIIGTPDYVAPEVLSYEPISLATDMWSVGVL 199
+N+LL +K+ +FG S V + GT DY+ PE++ D+WS+GVL
Sbjct: 139 ENLLLGSAGELKIANFGWS-VHAPSSRRTTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVL 197
Query: 200 AYVLLSSHSPFAGDNKQETFLNISQCNFSFHEDLFGHISSQAKDFIQSCLVTDP 253
Y L PF + QET+ IS+ F+F + ++ A+D I L +P
Sbjct: 198 CYEFLVGKPPFEANTYQETYKRISRVEFTFPD----FVTEGARDLISRLLKHNP 247
>pdb|3QBN|A Chain A, Structure Of Human Aurora A In Complex With A
Diaminopyrimidine
Length = 281
Score = 100 bits (249), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 65/234 (27%), Positives = 108/234 (46%), Gaps = 5/234 (2%)
Query: 20 SRGKFASVRKCTHKITKVEYAAKFIRKRRRSMDQMQDILHEAAVLYLAQKSERIVGLHEI 79
+GKF +V K +K A K + K + ++ L + + I+ L+
Sbjct: 18 GKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGY 77
Query: 80 YETPHEMVLVLEMVPDGELQRLVDIQDGIPEQDTRSYMKQILEALAFLHDHNITHLDLKP 139
+ + L+LE P G + R + EQ T +Y+ ++ AL++ H + H D+KP
Sbjct: 78 FHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKRVIHRDIKP 137
Query: 140 QNILLTKDNNIKLCDFGISRVVNDVVEVKEIIGTPDYVAPEVLSYEPISLATDMWSVGVL 199
+N+LL +K+ DFG S + GT DY+ PE++ D+WS+GVL
Sbjct: 138 ENLLLGSAGELKIADFGWSCHAPSSRRTT-LSGTLDYLPPEMIEGRMHDEKVDLWSLGVL 196
Query: 200 AYVLLSSHSPFAGDNKQETFLNISQCNFSFHEDLFGHISSQAKDFIQSCLVTDP 253
Y L PF + QET+ IS+ F+F + ++ A+D I L +P
Sbjct: 197 CYEFLVGKPPFEANTYQETYKRISRVEFTFPD----FVTEGARDLISRLLKHNP 246
>pdb|2UZT|A Chain A, Pka Structures Of Akt, Indazole-Pyridine Inhibitors
pdb|2UZU|E Chain E, Pka Structures Of Indazole-Pyridine Series Of Akt
Inhibitors
pdb|2UZV|A Chain A, Pka Structures Of Indazole-pyridine Series Of Akt
Inhibitors
pdb|2UZW|E Chain E, Pka Structures Of Indazole-Pyridine Series Of Akt
Inhibitors
Length = 336
Score = 100 bits (249), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 66/232 (28%), Positives = 112/232 (48%), Gaps = 8/232 (3%)
Query: 22 GKFASVRKCTHKITKVEYAAKFIRKRRR-SMDQMQDILHEAAVLYLAQKSERIVGLHEIY 80
G F V H T YA K + K++ + Q++ L+E +L A +V L +
Sbjct: 38 GSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQ-AVNFPFLVKLEFSF 96
Query: 81 ETPHEMVLVLEMVPDGELQRLVDIQDGIPEQDTRSYMKQILEALAFLHDHNITHLDLKPQ 140
+ + +V+E VP GE+ + E R Y QI+ +LH ++ + DLKP+
Sbjct: 97 KDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPE 156
Query: 141 NILLTKDNNIKLCDFGISRVVNDVVEVKEIIGTPDYVAPEVLSYEPISLATDMWSVGVLA 200
N+L+ + I++ DFG ++ V + GTP+Y+APE++ + + A D W++GVL
Sbjct: 157 NLLIDQQGYIQVTDFGFAKRVKG--RTWTLCGTPEYLAPEIILSKGYNKAVDWWALGVLI 214
Query: 201 YVLLSSHSPFAGDNKQETFLNISQCNFSFHEDLFGHISSQAKDFIQSCLVTD 252
Y + + + PF D + + I F H SS KD +++ L D
Sbjct: 215 YEMAAGYPPFFADQPIQIYEKIVSGKVRFP----SHFSSDLKDLLRNLLQVD 262
>pdb|3KA0|A Chain A, Mk2 Complex With Inhibitor
6-(5-(2-Aminopyrimidin-4-Ylamino)-2-
Hydroxyphenyl)-N-Methylbenzo[b]thiophene-2-Carboxamide
Length = 320
Score = 100 bits (248), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 78/240 (32%), Positives = 125/240 (52%), Gaps = 30/240 (12%)
Query: 32 HKITKVEYAAKFIR---KRRRSMDQMQDILHEAAVLYLAQKSERIVGLHEIYETPHE--- 85
+K T+ ++A K ++ K RR ++ LH + A + IV + ++YE +
Sbjct: 37 NKRTQEKFALKMLQDCPKARREVE-----LH-----WRASQCPHIVRIVDVYENLYAGRK 86
Query: 86 -MVLVLEMVPDGEL-QRLVDIQD-GIPEQDTRSYMKQILEALAFLHDHNITHLDLKPQNI 142
+++V+E + GEL R+ D D E++ MK I EA+ +LH NI H D+KP+N+
Sbjct: 87 CLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSINIAHRDVKPENL 146
Query: 143 LLT--KDNNI-KLCDFGISRVVNDVVEVKEIIGTPDYVAPEVLSYEPISLATDMWSVGVL 199
L T + N I KL DFG ++ + E TP YVAPEVL E + DMWS+GV+
Sbjct: 147 LYTSKRPNAILKLTDFGFAKETTSHNSLTEPCYTPYYVAPEVLGPEKYDKSCDMWSLGVI 206
Query: 200 AYVLLSSHSPFAGDN------KQETFLNISQCNFSFHEDLFGHISSQAKDFIQSCLVTDP 253
Y+LL + PF ++ +T + + Q F E + +S + K I++ L T+P
Sbjct: 207 MYILLCGYPPFYSNHGLAISPGMKTRIRMGQYEFPNPE--WSEVSEEVKMLIRNLLKTEP 264
>pdb|2C1A|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
Isoquinoline-5-Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl)amide
pdb|2C1B|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
(4r,2s)-5'-(4-(4-Chlorobenzyloxy)pyrrolidin-2-
Ylmethanesulfonyl)isoquinoline
pdb|2VO7|A Chain A, Structure Of Pka Complexed With 4-(4-Chlorobenzyl)-1-(7h-
Pyrrolo(2,3-D)pyrimidin-4-Yl)piperidin-4-Ylamine
pdb|3AG9|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1012
pdb|3AG9|B Chain B, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1012
Length = 351
Score = 100 bits (248), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 66/232 (28%), Positives = 112/232 (48%), Gaps = 8/232 (3%)
Query: 22 GKFASVRKCTHKITKVEYAAKFIRKRRR-SMDQMQDILHEAAVLYLAQKSERIVGLHEIY 80
G F V H T YA K + K++ + Q++ L+E +L A +V L +
Sbjct: 53 GSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQ-AVNFPFLVKLEFSF 111
Query: 81 ETPHEMVLVLEMVPDGELQRLVDIQDGIPEQDTRSYMKQILEALAFLHDHNITHLDLKPQ 140
+ + +V+E VP GE+ + E R Y QI+ +LH ++ + DLKP+
Sbjct: 112 KDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPE 171
Query: 141 NILLTKDNNIKLCDFGISRVVNDVVEVKEIIGTPDYVAPEVLSYEPISLATDMWSVGVLA 200
N+L+ + I++ DFG ++ V + GTP+Y+APE++ + + A D W++GVL
Sbjct: 172 NLLIDQQGYIQVTDFGFAKRVKG--RTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLI 229
Query: 201 YVLLSSHSPFAGDNKQETFLNISQCNFSFHEDLFGHISSQAKDFIQSCLVTD 252
Y + + + PF D + + I F H SS KD +++ L D
Sbjct: 230 YEMAAGYPPFFADQPIQIYEKIVSGKVRFP----SHFSSDLKDLLRNLLQVD 277
>pdb|1STC|E Chain E, Camp-Dependent Protein Kinase, Alpha-Catalytic Subunit In
Complex With Staurosporine
pdb|1Q8T|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase
(Pka) In Complex With Rho-Kinase Inhibitor Y-27632
pdb|1Q8U|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In
Complex With Rho-Kinase Inhibitor H-1152p
pdb|1SVE|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 1
pdb|1SVG|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 4
pdb|1VEB|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 5
pdb|3E8C|A Chain A, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|B Chain B, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|C Chain C, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|D Chain D, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|E Chain E, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|F Chain F, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8E|A Chain A, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|B Chain B, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|E Chain E, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|I Chain I, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|L Chain L, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|P Chain P, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
Length = 350
Score = 100 bits (248), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 66/232 (28%), Positives = 112/232 (48%), Gaps = 8/232 (3%)
Query: 22 GKFASVRKCTHKITKVEYAAKFIRKRRR-SMDQMQDILHEAAVLYLAQKSERIVGLHEIY 80
G F V H T YA K + K++ + Q++ L+E +L A +V L +
Sbjct: 52 GSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQ-AVNFPFLVKLEFSF 110
Query: 81 ETPHEMVLVLEMVPDGELQRLVDIQDGIPEQDTRSYMKQILEALAFLHDHNITHLDLKPQ 140
+ + +V+E VP GE+ + E R Y QI+ +LH ++ + DLKP+
Sbjct: 111 KDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPE 170
Query: 141 NILLTKDNNIKLCDFGISRVVNDVVEVKEIIGTPDYVAPEVLSYEPISLATDMWSVGVLA 200
N+L+ + I++ DFG ++ V + GTP+Y+APE++ + + A D W++GVL
Sbjct: 171 NLLIDQQGYIQVTDFGFAKRVKG--RTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLI 228
Query: 201 YVLLSSHSPFAGDNKQETFLNISQCNFSFHEDLFGHISSQAKDFIQSCLVTD 252
Y + + + PF D + + I F H SS KD +++ L D
Sbjct: 229 YEMAAGYPPFFADQPIQIYEKIVSGKVRFP----SHFSSDLKDLLRNLLQVD 276
>pdb|3D14|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly,
Lys240->arg, Met302- >leu) In Complex With
1-{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)- Ethyl]-
Thiazol-2-Yl}-3-(3-Trifluoromethyl-Phenyl)-Urea
pdb|3DJ5|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 290.
pdb|3DJ6|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 823.
pdb|3DJ7|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 130.
pdb|3D15|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
1-(3-Chloro-Phenyl)-3-
{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)-
Ethyl]-Thiazol-2- Yl}-Urea [sns-314]
pdb|3D2I|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With 1-{5-[2-(1-Methyl-1h-
Pyrazolo[4,
3-D]pyrimidin-7-Ylamino)-Ethyl]-Thiazol-2-Yl}-3-
(3-Trifluoromethyl-Phenyl)-Urea
pdb|3D2K|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
[7-(2-{2-[3-(3-Chloro-
Phenyl)-Ureido]-Thiazol-5-Yl}-Ethylamino)-Pyrazolo[4,3-
D]pyrimidin-1-Yl]-Acetic Acid
Length = 272
Score = 100 bits (248), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 64/230 (27%), Positives = 107/230 (46%), Gaps = 5/230 (2%)
Query: 20 SRGKFASVRKCTHKITKVEYAAKFIRKRRRSMDQMQDILHEAAVLYLAQKSERIVGLHEI 79
+GKF +V + +K A K + K + ++ L + + I+ L+
Sbjct: 21 GKGKFGNVYLARERQSKFILALKVLFKTQLEKAGVEHQLRREVEIQSHLRHPNILRLYGY 80
Query: 80 YETPHEMVLVLEMVPDGELQRLVDIQDGIPEQDTRSYMKQILEALAFLHDHNITHLDLKP 139
+ + L+LE P G + R + EQ T +Y+ ++ AL++ H + H D+KP
Sbjct: 81 FHDATRVYLILEYAPLGTVYRELQKLSRFDEQRTATYITELANALSYCHSKRVIHRDIKP 140
Query: 140 QNILLTKDNNIKLCDFGISRVVNDVVEVKEIIGTPDYVAPEVLSYEPISLATDMWSVGVL 199
+N+LL + +K+ DFG S V + GT DY+ PE++ D+WS+GVL
Sbjct: 141 ENLLLGSNGELKIADFGWS-VHAPSSRRTTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVL 199
Query: 200 AYVLLSSHSPFAGDNKQETFLNISQCNFSFHEDLFGHISSQAKDFIQSCL 249
Y L PF QET+ IS+ F+F + ++ A+D I L
Sbjct: 200 CYEFLVGMPPFEAHTYQETYRRISRVEFTFPD----FVTEGARDLISRLL 245
>pdb|1SVH|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 8
pdb|1XH5|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|1XH6|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|1XH8|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|2GFC|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
Length = 350
Score = 100 bits (248), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 66/232 (28%), Positives = 112/232 (48%), Gaps = 8/232 (3%)
Query: 22 GKFASVRKCTHKITKVEYAAKFIRKRRR-SMDQMQDILHEAAVLYLAQKSERIVGLHEIY 80
G F V H T YA K + K++ + Q++ L+E +L A +V L +
Sbjct: 52 GSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQ-AVNFPFLVKLEFSF 110
Query: 81 ETPHEMVLVLEMVPDGELQRLVDIQDGIPEQDTRSYMKQILEALAFLHDHNITHLDLKPQ 140
+ + +V+E VP GE+ + E R Y QI+ +LH ++ + DLKP+
Sbjct: 111 KDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPE 170
Query: 141 NILLTKDNNIKLCDFGISRVVNDVVEVKEIIGTPDYVAPEVLSYEPISLATDMWSVGVLA 200
N+L+ + I++ DFG ++ V + GTP+Y+APE++ + + A D W++GVL
Sbjct: 171 NLLIDQQGYIQVTDFGFAKRVKG--RTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLI 228
Query: 201 YVLLSSHSPFAGDNKQETFLNISQCNFSFHEDLFGHISSQAKDFIQSCLVTD 252
Y + + + PF D + + I F H SS KD +++ L D
Sbjct: 229 YEMAAGYPPFFADQPIQIYEKIVSGKVRFP----SHFSSDLKDLLRNLLQVD 276
>pdb|3DND|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
pdb|3DNE|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
Length = 350
Score = 100 bits (248), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 66/232 (28%), Positives = 112/232 (48%), Gaps = 8/232 (3%)
Query: 22 GKFASVRKCTHKITKVEYAAKFIRKRRR-SMDQMQDILHEAAVLYLAQKSERIVGLHEIY 80
G F V H T YA K + K++ + Q++ L+E +L A +V L +
Sbjct: 52 GSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQ-AVNFPFLVKLEFSF 110
Query: 81 ETPHEMVLVLEMVPDGELQRLVDIQDGIPEQDTRSYMKQILEALAFLHDHNITHLDLKPQ 140
+ + +V+E VP GE+ + E R Y QI+ +LH ++ + DLKP+
Sbjct: 111 KDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPE 170
Query: 141 NILLTKDNNIKLCDFGISRVVNDVVEVKEIIGTPDYVAPEVLSYEPISLATDMWSVGVLA 200
N+L+ + I++ DFG ++ V + GTP+Y+APE++ + + A D W++GVL
Sbjct: 171 NLLIDQQGYIQVTDFGFAKRVKG--RTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLI 228
Query: 201 YVLLSSHSPFAGDNKQETFLNISQCNFSFHEDLFGHISSQAKDFIQSCLVTD 252
Y + + + PF D + + I F H SS KD +++ L D
Sbjct: 229 YEMAAGYPPFFADQPIQIYEKIVSGKVRFP----SHFSSDLKDLLRNLLQVD 276
>pdb|2F7E|E Chain E, Pka Complexed With
(S)-2-(1h-Indol-3-Yl)-1-(5-Isoquinolin-6-
Yl-Pyridin-3-Yloxymethyl-Etylamine
pdb|2F7X|E Chain E, Protein Kinase A Bound To
(s)-2-(1h-indol-3-yl)-1-[5-((e)-2-
Pyridin-4-yl-vinyl)-pyridin-3-yloxymethyl]-ethylamine
pdb|2F7Z|E Chain E, Protein Kinase A Bound To
(R)-1-(1h-Indol-3-Ylmethyl)-2-(2-
Pyridin-4-Yl-[1,7]naphtyridin-5-Yloxy)-Ehylamine
pdb|2OH0|E Chain E, Crystal Structure Of Protein Kinase A In Complex With
Pyridine-Pyrazolopyridine Based Inhibitors
pdb|2OJF|E Chain E, Crystal Structure Of Protein Kinase A In Complex With
Pyridine-Pyrazolopyridine Based Inhibitors
Length = 351
Score = 100 bits (248), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 66/232 (28%), Positives = 112/232 (48%), Gaps = 8/232 (3%)
Query: 22 GKFASVRKCTHKITKVEYAAKFIRKRRR-SMDQMQDILHEAAVLYLAQKSERIVGLHEIY 80
G F V H T YA K + K++ + Q++ L+E +L A +V L +
Sbjct: 53 GSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQ-AVNFPFLVKLEFSF 111
Query: 81 ETPHEMVLVLEMVPDGELQRLVDIQDGIPEQDTRSYMKQILEALAFLHDHNITHLDLKPQ 140
+ + +V+E VP GE+ + E R Y QI+ +LH ++ + DLKP+
Sbjct: 112 KDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPE 171
Query: 141 NILLTKDNNIKLCDFGISRVVNDVVEVKEIIGTPDYVAPEVLSYEPISLATDMWSVGVLA 200
N+L+ + I++ DFG ++ V + GTP+Y+APE++ + + A D W++GVL
Sbjct: 172 NLLIDQQGYIQVTDFGFAKRVKGRTWT--LCGTPEYLAPEIILSKGYNKAVDWWALGVLI 229
Query: 201 YVLLSSHSPFAGDNKQETFLNISQCNFSFHEDLFGHISSQAKDFIQSCLVTD 252
Y + + + PF D + + I F H SS KD +++ L D
Sbjct: 230 YEMAAGYPPFFADQPIQIYEKIVSGKVRFP----SHFSSDLKDLLRNLLQVD 277
>pdb|3DAJ|A Chain A, Crystal Structure Of Aurora A Complexed With An Inhibitor
Discovered Through Site-Directed Dynamic Tethering
Length = 272
Score = 100 bits (248), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 64/230 (27%), Positives = 107/230 (46%), Gaps = 5/230 (2%)
Query: 20 SRGKFASVRKCTHKITKVEYAAKFIRKRRRSMDQMQDILHEAAVLYLAQKSERIVGLHEI 79
+GKF +V + +K A K + K + ++ L + + I+ L+
Sbjct: 21 GKGKFGNVYLARERQSKFILALKVLFKTQLEKAGVEHQLRREVEIQSHLRHPNILRLYGY 80
Query: 80 YETPHEMVLVLEMVPDGELQRLVDIQDGIPEQDTRSYMKQILEALAFLHDHNITHLDLKP 139
+ + L+LE P G + R + EQ T +Y+ ++ AL++ H + H D+KP
Sbjct: 81 FHDATRVYLILEYAPLGTVYRELQKLSRFDEQRTATYITELANALSYCHSKRVIHRDIKP 140
Query: 140 QNILLTKDNNIKLCDFGISRVVNDVVEVKEIIGTPDYVAPEVLSYEPISLATDMWSVGVL 199
+N+LL + +K+ DFG S V + GT DY+ PE++ D+WS+GVL
Sbjct: 141 ENLLLGSNGELKIADFGWS-VHAPSSRRDTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVL 199
Query: 200 AYVLLSSHSPFAGDNKQETFLNISQCNFSFHEDLFGHISSQAKDFIQSCL 249
Y L PF QET+ IS+ F+F + ++ A+D I L
Sbjct: 200 CYEFLVGMPPFEAHTYQETYRRISRVEFTFPD----FVTEGARDLISRLL 245
>pdb|1Q8W|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In
Complex With Rho-Kinase Inhibitor Fasudil (Ha-1077)
pdb|1XH4|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|3BWJ|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Lead Compound Arc-1034
pdb|3KKV|A Chain A, Structure Of Pka With A Protein Kinase B-Selective
Inhibitor
Length = 350
Score = 99.8 bits (247), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 66/232 (28%), Positives = 112/232 (48%), Gaps = 8/232 (3%)
Query: 22 GKFASVRKCTHKITKVEYAAKFIRKRRR-SMDQMQDILHEAAVLYLAQKSERIVGLHEIY 80
G F V H T YA K + K++ + Q++ L+E +L A +V L +
Sbjct: 52 GSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQ-AVNFPFLVKLEFSF 110
Query: 81 ETPHEMVLVLEMVPDGELQRLVDIQDGIPEQDTRSYMKQILEALAFLHDHNITHLDLKPQ 140
+ + +V+E VP GE+ + E R Y QI+ +LH ++ + DLKP+
Sbjct: 111 KDNSNLYMVMEYVPGGEMFSHLRRIGRFXEPHARFYAAQIVLTFEYLHSLDLIYRDLKPE 170
Query: 141 NILLTKDNNIKLCDFGISRVVNDVVEVKEIIGTPDYVAPEVLSYEPISLATDMWSVGVLA 200
N+L+ + I++ DFG ++ V + GTP+Y+APE++ + + A D W++GVL
Sbjct: 171 NLLIDQQGYIQVTDFGFAKRVKG--RTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLI 228
Query: 201 YVLLSSHSPFAGDNKQETFLNISQCNFSFHEDLFGHISSQAKDFIQSCLVTD 252
Y + + + PF D + + I F H SS KD +++ L D
Sbjct: 229 YEMAAGYPPFFADQPIQIYEKIVSGKVRFP----SHFSSDLKDLLRNLLQVD 276
>pdb|1XH7|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 99.8 bits (247), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 66/232 (28%), Positives = 112/232 (48%), Gaps = 8/232 (3%)
Query: 22 GKFASVRKCTHKITKVEYAAKFIRKRRR-SMDQMQDILHEAAVLYLAQKSERIVGLHEIY 80
G F V H T YA K + K++ + Q++ L+E +L A +V L +
Sbjct: 52 GSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQ-AVNFPFLVKLEFSF 110
Query: 81 ETPHEMVLVLEMVPDGELQRLVDIQDGIPEQDTRSYMKQILEALAFLHDHNITHLDLKPQ 140
+ + +V+E VP GE+ + E R Y QI+ +LH ++ + DLKP+
Sbjct: 111 KDNSNLYMVMEYVPGGEMFSHLRRIGRFXEPHARFYAAQIVLTFEYLHSLDLIYRDLKPE 170
Query: 141 NILLTKDNNIKLCDFGISRVVNDVVEVKEIIGTPDYVAPEVLSYEPISLATDMWSVGVLA 200
N+L+ + I++ DFG ++ V + GTP+Y+APE++ + + A D W++GVL
Sbjct: 171 NLLIDQQGYIQVTDFGFAKRVKG--RTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLI 228
Query: 201 YVLLSSHSPFAGDNKQETFLNISQCNFSFHEDLFGHISSQAKDFIQSCLVTD 252
Y + + + PF D + + I F H SS KD +++ L D
Sbjct: 229 YEMAAGYPPFFADQPIQIYEKIVSGKVRFP----SHFSSDLKDLLRNLLQVD 276
>pdb|2JDS|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
A- 443654
Length = 351
Score = 99.8 bits (247), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 66/232 (28%), Positives = 112/232 (48%), Gaps = 8/232 (3%)
Query: 22 GKFASVRKCTHKITKVEYAAKFIRKRRR-SMDQMQDILHEAAVLYLAQKSERIVGLHEIY 80
G F V H T YA K + K++ + Q++ L+E +L A +V L +
Sbjct: 53 GSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQ-AVNFPFLVKLEFSF 111
Query: 81 ETPHEMVLVLEMVPDGELQRLVDIQDGIPEQDTRSYMKQILEALAFLHDHNITHLDLKPQ 140
+ + +V+E VP GE+ + E R Y QI+ +LH ++ + DLKP+
Sbjct: 112 KDNSNLYMVMEYVPGGEMFSHLRRIGRFXEPHARFYAAQIVLTFEYLHSLDLIYRDLKPE 171
Query: 141 NILLTKDNNIKLCDFGISRVVNDVVEVKEIIGTPDYVAPEVLSYEPISLATDMWSVGVLA 200
N+L+ + I++ DFG ++ V + GTP+Y+APE++ + + A D W++GVL
Sbjct: 172 NLLIDQQGYIQVTDFGFAKRVKG--RTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLI 229
Query: 201 YVLLSSHSPFAGDNKQETFLNISQCNFSFHEDLFGHISSQAKDFIQSCLVTD 252
Y + + + PF D + + I F H SS KD +++ L D
Sbjct: 230 YEMAAGYPPFFADQPIQIYEKIVSGKVRFP----SHFSSDLKDLLRNLLQVD 277
>pdb|1Q61|A Chain A, Pka Triple Mutant Model Of Pkb
Length = 350
Score = 99.0 bits (245), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 65/232 (28%), Positives = 111/232 (47%), Gaps = 8/232 (3%)
Query: 22 GKFASVRKCTHKITKVEYAAKFIRKRRR-SMDQMQDILHEAAVLYLAQKSERIVGLHEIY 80
G F V H T YA K + K++ + Q++ L+E +L A +V L +
Sbjct: 52 GSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQ-AVNFPFLVKLEFSF 110
Query: 81 ETPHEMVLVLEMVPDGELQRLVDIQDGIPEQDTRSYMKQILEALAFLHDHNITHLDLKPQ 140
+ + +V+E P GE+ + E R Y QI+ +LH ++ + DLKP+
Sbjct: 111 KDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPE 170
Query: 141 NILLTKDNNIKLCDFGISRVVNDVVEVKEIIGTPDYVAPEVLSYEPISLATDMWSVGVLA 200
N+++ + IK+ DFG ++ V + GTP+Y+APE++ + + A D W++GVL
Sbjct: 171 NLMIDQQGYIKVTDFGFAKRVKG--RTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLI 228
Query: 201 YVLLSSHSPFAGDNKQETFLNISQCNFSFHEDLFGHISSQAKDFIQSCLVTD 252
Y + + + PF D + + I F H SS KD +++ L D
Sbjct: 229 YEMAAGYPPFFADQPIQIYEKIVSGKVRFP----SHFSSDLKDLLRNLLQVD 276
>pdb|2GNF|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase With
Y- 27632
Length = 350
Score = 99.0 bits (245), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 65/232 (28%), Positives = 112/232 (48%), Gaps = 8/232 (3%)
Query: 22 GKFASVRKCTHKITKVEYAAKFIRKRRR-SMDQMQDILHEAAVLYLAQKSERIVGLHEIY 80
G F V H T YA K + K++ + Q++ L+E +L A +V L +
Sbjct: 52 GSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQ-AVNFPFLVKLEFSF 110
Query: 81 ETPHEMVLVLEMVPDGELQRLVDIQDGIPEQDTRSYMKQILEALAFLHDHNITHLDLKPQ 140
+ + +V+E +P G++ + E R Y QI+ +LH ++ + DLKP+
Sbjct: 111 KDNSNLYMVMEYMPGGDMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPE 170
Query: 141 NILLTKDNNIKLCDFGISRVVNDVVEVKEIIGTPDYVAPEVLSYEPISLATDMWSVGVLA 200
N+L+ + IK+ DFG ++ V + GTP+Y+APE++ + + A D W++GVL
Sbjct: 171 NLLIDQQGYIKVADFGFAKRVKG--RTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLI 228
Query: 201 YVLLSSHSPFAGDNKQETFLNISQCNFSFHEDLFGHISSQAKDFIQSCLVTD 252
Y + + + PF D + + I F H SS KD +++ L D
Sbjct: 229 YEMAAGYPPFFADQPIQIYEKIVSGKVRFP----SHFSSDLKDLLRNLLQVD 276
>pdb|2GNG|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase
pdb|2GNH|A Chain A, Pka Five Fold Mutant Model Of Rho-Kinase With H1152p
pdb|2GNI|A Chain A, Pka Fivefold Mutant Model Of Rho-Kinase With Inhibitor
Fasudil (Ha1077)
Length = 350
Score = 99.0 bits (245), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 65/232 (28%), Positives = 112/232 (48%), Gaps = 8/232 (3%)
Query: 22 GKFASVRKCTHKITKVEYAAKFIRKRRR-SMDQMQDILHEAAVLYLAQKSERIVGLHEIY 80
G F V H T YA K + K++ + Q++ L+E +L A +V L +
Sbjct: 52 GSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQ-AVNFPFLVKLEFSF 110
Query: 81 ETPHEMVLVLEMVPDGELQRLVDIQDGIPEQDTRSYMKQILEALAFLHDHNITHLDLKPQ 140
+ + +V+E +P G++ + E R Y QI+ +LH ++ + DLKP+
Sbjct: 111 KDNSNLYMVMEYMPGGDMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPE 170
Query: 141 NILLTKDNNIKLCDFGISRVVNDVVEVKEIIGTPDYVAPEVLSYEPISLATDMWSVGVLA 200
N+L+ + IK+ DFG ++ V + GTP+Y+APE++ + + A D W++GVL
Sbjct: 171 NLLIDQQGYIKVADFGFAKRVKG--RTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLI 228
Query: 201 YVLLSSHSPFAGDNKQETFLNISQCNFSFHEDLFGHISSQAKDFIQSCLVTD 252
Y + + + PF D + + I F H SS KD +++ L D
Sbjct: 229 YEMAAGYPPFFADQPIQIYEKIVSGKVRFP----SHFSSDLKDLLRNLLQVD 276
>pdb|1SZM|A Chain A, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein
Kinase A (Pka)
pdb|1SZM|B Chain B, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein
Kinase A (Pka)
Length = 350
Score = 99.0 bits (245), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 65/232 (28%), Positives = 111/232 (47%), Gaps = 8/232 (3%)
Query: 22 GKFASVRKCTHKITKVEYAAKFIRKRRR-SMDQMQDILHEAAVLYLAQKSERIVGLHEIY 80
G F V H T YA K + K++ + Q++ L+E +L A +V L +
Sbjct: 52 GSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQ-AVNFPFLVKLEFSF 110
Query: 81 ETPHEMVLVLEMVPDGELQRLVDIQDGIPEQDTRSYMKQILEALAFLHDHNITHLDLKPQ 140
+ + +V+E P GE+ + E R Y QI+ +LH ++ + DLKP+
Sbjct: 111 KDNSNLYMVMEYAPGGEMFSHLRRIGRFXEPHARFYAAQIVLTFEYLHSLDLIYRDLKPE 170
Query: 141 NILLTKDNNIKLCDFGISRVVNDVVEVKEIIGTPDYVAPEVLSYEPISLATDMWSVGVLA 200
N+++ + IK+ DFG ++ V + GTP+Y+APE++ + + A D W++GVL
Sbjct: 171 NLMIDQQGYIKVTDFGFAKRVKG--RTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLI 228
Query: 201 YVLLSSHSPFAGDNKQETFLNISQCNFSFHEDLFGHISSQAKDFIQSCLVTD 252
Y + + + PF D + + I F H SS KD +++ L D
Sbjct: 229 YEMAAGYPPFFADQPIQIYEKIVSGKVRFP----SHFSSDLKDLLRNLLQVD 276
>pdb|4DFY|A Chain A, Crystal Structure Of R194a Mutant Of Camp-Dependent
Protein Kinase With Unphosphorylated Activation Loop
pdb|4DFY|E Chain E, Crystal Structure Of R194a Mutant Of Camp-Dependent
Protein Kinase With Unphosphorylated Activation Loop
Length = 371
Score = 98.6 bits (244), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 65/232 (28%), Positives = 112/232 (48%), Gaps = 8/232 (3%)
Query: 22 GKFASVRKCTHKITKVEYAAKFIRKRRR-SMDQMQDILHEAAVLYLAQKSERIVGLHEIY 80
G F V HK + YA K + K++ + Q++ L+E +L A +V L +
Sbjct: 73 GSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQ-AVNFPFLVKLEFSF 131
Query: 81 ETPHEMVLVLEMVPDGELQRLVDIQDGIPEQDTRSYMKQILEALAFLHDHNITHLDLKPQ 140
+ + +V+E V GE+ + E R Y QI+ +LH ++ + DLKP+
Sbjct: 132 KDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPE 191
Query: 141 NILLTKDNNIKLCDFGISRVVNDVVEVKEIIGTPDYVAPEVLSYEPISLATDMWSVGVLA 200
N+L+ + I++ DFG ++ V + GTP+Y+APE++ + + A D W++GVL
Sbjct: 192 NLLIDQQGYIQVTDFGFAKRVKGATWT--LCGTPEYLAPEIILSKGYNKAVDWWALGVLI 249
Query: 201 YVLLSSHSPFAGDNKQETFLNISQCNFSFHEDLFGHISSQAKDFIQSCLVTD 252
Y + + + PF D + + I F H SS KD +++ L D
Sbjct: 250 YEMAAGYPPFFADQPIQIYEKIVSGKVRFPS----HFSSDLKDLLRNLLQVD 297
>pdb|1XH9|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 98.2 bits (243), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 64/232 (27%), Positives = 112/232 (48%), Gaps = 8/232 (3%)
Query: 22 GKFASVRKCTHKITKVEYAAKFIRKRRR-SMDQMQDILHEAAVLYLAQKSERIVGLHEIY 80
G F V H T YA K + K++ + +++ L+E +L A +V L +
Sbjct: 52 GSFGRVMLVKHMETGNHYAMKILDKQKVVKLKEIEHTLNEKRILQ-AVNFPFLVKLEFSF 110
Query: 81 ETPHEMVLVLEMVPDGELQRLVDIQDGIPEQDTRSYMKQILEALAFLHDHNITHLDLKPQ 140
+ + +V+E P GE+ + E R Y QI+ +LH ++ + DLKP+
Sbjct: 111 KDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPE 170
Query: 141 NILLTKDNNIKLCDFGISRVVNDVVEVKEIIGTPDYVAPEVLSYEPISLATDMWSVGVLA 200
N+++ + IK+ DFG+++ V + GTP+Y+APE++ + + A D W++GVL
Sbjct: 171 NLMIDQQGYIKVTDFGLAKRVKG--RTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLI 228
Query: 201 YVLLSSHSPFAGDNKQETFLNISQCNFSFHEDLFGHISSQAKDFIQSCLVTD 252
Y + + + PF D + + I F H SS KD +++ L D
Sbjct: 229 YEMAAGYPPFFADQPIQIYEKIVSGKVRFP----SHFSSDLKDLLRNLLQVD 276
>pdb|4GV1|A Chain A, Pkb Alpha In Complex With Azd5363
Length = 340
Score = 98.2 bits (243), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 72/239 (30%), Positives = 111/239 (46%), Gaps = 12/239 (5%)
Query: 20 SRGKFASVRKCTHKITKVEYAAKFIRKRR-RSMDQMQDILHEAAVLYLAQKSER--IVGL 76
+G F V K T YA K ++K + D++ L E VL Q S + L
Sbjct: 17 GKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVL---QNSRHPFLTAL 73
Query: 77 HEIYETPHEMVLVLEMVPDGELQRLVDIQDGIPEQDTRSYMKQILEALAFLH-DHNITHL 135
++T + V+E GEL + + E R Y +I+ AL +LH + N+ +
Sbjct: 74 KYSFQTHDRLCFVMEYANGGELFFHLSRERVFSEDRARFYGAEIVSALDYLHSEKNVVYR 133
Query: 136 DLKPQNILLTKDNNIKLCDFGISR-VVNDVVEVKEIIGTPDYVAPEVLSYEPISLATDMW 194
DLK +N++L KD +IK+ DFG+ + + D +K GTP+Y+APEVL A D W
Sbjct: 134 DLKLENLMLDKDGHIKITDFGLCKEGIKDGATMKXFCGTPEYLAPEVLEDNDYGRAVDWW 193
Query: 195 SVGVLAYVLLSSHSPFAGDNKQETFLNISQCNFSFHEDLFGHISSQAKDFIQSCLVTDP 253
+GV+ Y ++ PF + ++ F I F L +AK + L DP
Sbjct: 194 GLGVVMYEMMCGRLPFYNQDHEKLFELILMEEIRFPRTL----GPEAKSLLSGLLKKDP 248
>pdb|3OCB|A Chain A, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor
pdb|3OCB|B Chain B, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor
pdb|3OW4|A Chain A, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|3OW4|B Chain B, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|3QKK|A Chain A, Spirochromane Akt Inhibitors
pdb|3QKL|A Chain A, Spirochromane Akt Inhibitors
pdb|3QKM|A Chain A, Spirocyclic Sulfonamides As Akt Inhibitors
pdb|4EKK|A Chain A, Akt1 With Amp-Pnp
pdb|4EKK|B Chain B, Akt1 With Amp-Pnp
pdb|4EKL|A Chain A, Akt1 With Gdc0068
Length = 341
Score = 98.2 bits (243), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 72/239 (30%), Positives = 111/239 (46%), Gaps = 12/239 (5%)
Query: 20 SRGKFASVRKCTHKITKVEYAAKFIRKRR-RSMDQMQDILHEAAVLYLAQKSER--IVGL 76
+G F V K T YA K ++K + D++ L E VL Q S + L
Sbjct: 18 GKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVL---QNSRHPFLTAL 74
Query: 77 HEIYETPHEMVLVLEMVPDGELQRLVDIQDGIPEQDTRSYMKQILEALAFLH-DHNITHL 135
++T + V+E GEL + + E R Y +I+ AL +LH + N+ +
Sbjct: 75 KYSFQTHDRLCFVMEYANGGELFFHLSRERVFSEDRARFYGAEIVSALDYLHSEKNVVYR 134
Query: 136 DLKPQNILLTKDNNIKLCDFGISR-VVNDVVEVKEIIGTPDYVAPEVLSYEPISLATDMW 194
DLK +N++L KD +IK+ DFG+ + + D +K GTP+Y+APEVL A D W
Sbjct: 135 DLKLENLMLDKDGHIKITDFGLCKEGIKDGATMKXFCGTPEYLAPEVLEDNDYGRAVDWW 194
Query: 195 SVGVLAYVLLSSHSPFAGDNKQETFLNISQCNFSFHEDLFGHISSQAKDFIQSCLVTDP 253
+GV+ Y ++ PF + ++ F I F L +AK + L DP
Sbjct: 195 GLGVVMYEMMCGRLPFYNQDHEKLFELILMEEIRFPRTL----GPEAKSLLSGLLKKDP 249
>pdb|3GOK|A Chain A, Binding Site Mapping Of Protein Ligands
pdb|3GOK|B Chain B, Binding Site Mapping Of Protein Ligands
pdb|3GOK|C Chain C, Binding Site Mapping Of Protein Ligands
pdb|3GOK|D Chain D, Binding Site Mapping Of Protein Ligands
pdb|3GOK|E Chain E, Binding Site Mapping Of Protein Ligands
pdb|3GOK|F Chain F, Binding Site Mapping Of Protein Ligands
pdb|3GOK|G Chain G, Binding Site Mapping Of Protein Ligands
pdb|3GOK|H Chain H, Binding Site Mapping Of Protein Ligands
pdb|3GOK|I Chain I, Binding Site Mapping Of Protein Ligands
pdb|3GOK|J Chain J, Binding Site Mapping Of Protein Ligands
pdb|3GOK|K Chain K, Binding Site Mapping Of Protein Ligands
pdb|3GOK|L Chain L, Binding Site Mapping Of Protein Ligands
Length = 334
Score = 98.2 bits (243), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 77/240 (32%), Positives = 124/240 (51%), Gaps = 30/240 (12%)
Query: 32 HKITKVEYAAKFIR---KRRRSMDQMQDILHEAAVLYLAQKSERIVGLHEIYETPHE--- 85
+K T+ ++A K ++ K RR ++ LH + A + IV + ++YE +
Sbjct: 53 NKRTQEKFALKMLQDCPKARREVE-----LH-----WRASQCPHIVRIVDVYENLYAGRK 102
Query: 86 -MVLVLEMVPDGEL-QRLVDIQD-GIPEQDTRSYMKQILEALAFLHDHNITHLDLKPQNI 142
+++V+E + GEL R+ D D E++ MK I EA+ +LH NI H D+KP+N+
Sbjct: 103 CLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSINIAHRDVKPENL 162
Query: 143 LLT--KDNNI-KLCDFGISRVVNDVVEVKEIIGTPDYVAPEVLSYEPISLATDMWSVGVL 199
L T + N I KL DFG ++ + TP YVAPEVL E + DMWS+GV+
Sbjct: 163 LYTSKRPNAILKLTDFGFAKETTSHNSLTTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVI 222
Query: 200 AYVLLSSHSPFAGDN------KQETFLNISQCNFSFHEDLFGHISSQAKDFIQSCLVTDP 253
Y+LL + PF ++ +T + + Q F E + +S + K I++ L T+P
Sbjct: 223 MYILLCGYPPFYSNHGLAISPGMKTRIRMGQYEFPNPE--WSEVSEEVKMLIRNLLKTEP 280
>pdb|2JBO|A Chain A, Protein Kinase Mk2 In Complex With An Inhibitor (Crystal
Form-1, Soaking)
pdb|2JBP|A Chain A, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|B Chain B, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|C Chain C, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|D Chain D, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|E Chain E, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|F Chain F, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|G Chain G, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|H Chain H, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|I Chain I, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|J Chain J, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|K Chain K, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|L Chain L, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
Length = 326
Score = 98.2 bits (243), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 77/240 (32%), Positives = 124/240 (51%), Gaps = 30/240 (12%)
Query: 32 HKITKVEYAAKFIR---KRRRSMDQMQDILHEAAVLYLAQKSERIVGLHEIYETPHE--- 85
+K T+ ++A K ++ K RR ++ LH + A + IV + ++YE +
Sbjct: 45 NKRTQEKFALKMLQDCPKARREVE-----LH-----WRASQCPHIVRIVDVYENLYAGRK 94
Query: 86 -MVLVLEMVPDGEL-QRLVDIQD-GIPEQDTRSYMKQILEALAFLHDHNITHLDLKPQNI 142
+++V+E + GEL R+ D D E++ MK I EA+ +LH NI H D+KP+N+
Sbjct: 95 CLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSINIAHRDVKPENL 154
Query: 143 LLT--KDNNI-KLCDFGISRVVNDVVEVKEIIGTPDYVAPEVLSYEPISLATDMWSVGVL 199
L T + N I KL DFG ++ + TP YVAPEVL E + DMWS+GV+
Sbjct: 155 LYTSKRPNAILKLTDFGFAKETTSHNSLTTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVI 214
Query: 200 AYVLLSSHSPFAGDN------KQETFLNISQCNFSFHEDLFGHISSQAKDFIQSCLVTDP 253
Y+LL + PF ++ +T + + Q F E + +S + K I++ L T+P
Sbjct: 215 MYILLCGYPPFYSNHGLAISPGMKTRIRMGQYEFPNPE--WSEVSEEVKMLIRNLLKTEP 272
>pdb|1KWP|A Chain A, Crystal Structure Of Mapkap2
pdb|1KWP|B Chain B, Crystal Structure Of Mapkap2
pdb|1NY3|A Chain A, Crystal Structure Of Adp Bound To Map Kap Kinase 2
Length = 400
Score = 98.2 bits (243), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 68/194 (35%), Positives = 104/194 (53%), Gaps = 14/194 (7%)
Query: 72 RIVGLHE-IYETPHEMVLVLEMVPDGEL-QRLVDIQD-GIPEQDTRSYMKQILEALAFLH 128
RIV ++E +Y +++V+E + GEL R+ D D E++ MK I EA+ +LH
Sbjct: 119 RIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLH 178
Query: 129 DHNITHLDLKPQNILLT--KDNNI-KLCDFGISRVVNDVVEVKEIIGTPDYVAPEVLSYE 185
NI H D+KP+N+L T + N I KL DFG ++ + TP YVAPEVL E
Sbjct: 179 SINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTPCYTPYYVAPEVLGPE 238
Query: 186 PISLATDMWSVGVLAYVLLSSHSPFAGDN------KQETFLNISQCNFSFHEDLFGHISS 239
+ DMWS+GV+ Y+LL + PF ++ +T + + Q F E + +S
Sbjct: 239 KYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQYEFPNPE--WSEVSE 296
Query: 240 QAKDFIQSCLVTDP 253
+ K I++ L T+P
Sbjct: 297 EVKMLIRNLLKTEP 310
>pdb|2GU8|A Chain A, Discovery Of 2-pyrimidyl-5-amidothiophenes As Novel And
Potent Inhibitors For Akt: Synthesis And Sar Studies
Length = 337
Score = 98.2 bits (243), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 65/232 (28%), Positives = 112/232 (48%), Gaps = 8/232 (3%)
Query: 22 GKFASVRKCTHKITKVEYAAKFIRKRRR-SMDQMQDILHEAAVLYLAQKSERIVGLHEIY 80
G F V HK + YA K + K++ + Q++ L+E +L A +V L +
Sbjct: 39 GSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQ-AVNFPFLVKLEFSF 97
Query: 81 ETPHEMVLVLEMVPDGELQRLVDIQDGIPEQDTRSYMKQILEALAFLHDHNITHLDLKPQ 140
+ + +V+E V GE+ + E R Y QI+ +LH ++ + DLKP+
Sbjct: 98 KDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPE 157
Query: 141 NILLTKDNNIKLCDFGISRVVNDVVEVKEIIGTPDYVAPEVLSYEPISLATDMWSVGVLA 200
N+L+ + I++ DFG ++ V + GTP+Y+APE++ + + A D W++GVL
Sbjct: 158 NLLIDEQGYIQVTDFGFAKRVKG--RTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLI 215
Query: 201 YVLLSSHSPFAGDNKQETFLNISQCNFSFHEDLFGHISSQAKDFIQSCLVTD 252
Y + + + PF D + + I F H SS KD +++ L D
Sbjct: 216 YEMAAGYPPFFADQPIQIYEKIVSGKVRFP----SHFSSDLKDLLRNLLQVD 263
>pdb|3R2B|A Chain A, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|B Chain B, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|C Chain C, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|D Chain D, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|E Chain E, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|F Chain F, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|G Chain G, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|H Chain H, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|I Chain I, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|J Chain J, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|K Chain K, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|L Chain L, Mk2 Kinase Bound To Compound 5b
Length = 318
Score = 98.2 bits (243), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 68/194 (35%), Positives = 104/194 (53%), Gaps = 14/194 (7%)
Query: 72 RIVGLHE-IYETPHEMVLVLEMVPDGEL-QRLVDIQD-GIPEQDTRSYMKQILEALAFLH 128
RIV ++E +Y +++V+E + GEL R+ D D E++ MK I EA+ +LH
Sbjct: 73 RIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLH 132
Query: 129 DHNITHLDLKPQNILLT--KDNNI-KLCDFGISRVVNDVVEVKEIIGTPDYVAPEVLSYE 185
NI H D+KP+N+L T + N I KL DFG ++ + TP YVAPEVL E
Sbjct: 133 SINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTPCYTPYYVAPEVLGPE 192
Query: 186 PISLATDMWSVGVLAYVLLSSHSPFAGDN------KQETFLNISQCNFSFHEDLFGHISS 239
+ DMWS+GV+ Y+LL + PF ++ +T + + Q F E + +S
Sbjct: 193 KYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQYEFPNPE--WSEVSE 250
Query: 240 QAKDFIQSCLVTDP 253
+ K I++ L T+P
Sbjct: 251 EVKMLIRNLLKTEP 264
>pdb|2PZY|A Chain A, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|B Chain B, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|C Chain C, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|D Chain D, Structure Of Mk2 Complexed With Compound 76
pdb|3KC3|A Chain A, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|B Chain B, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|C Chain C, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|D Chain D, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|E Chain E, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|F Chain F, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|G Chain G, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|H Chain H, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|I Chain I, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|J Chain J, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|K Chain K, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|L Chain L, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3A2C|A Chain A, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|B Chain B, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|C Chain C, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|D Chain D, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|E Chain E, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|F Chain F, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|G Chain G, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|H Chain H, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|I Chain I, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|J Chain J, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|K Chain K, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|L Chain L, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
Length = 324
Score = 98.2 bits (243), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 77/240 (32%), Positives = 124/240 (51%), Gaps = 30/240 (12%)
Query: 32 HKITKVEYAAKFIR---KRRRSMDQMQDILHEAAVLYLAQKSERIVGLHEIYETPHE--- 85
+K T+ ++A K ++ K RR ++ LH + A + IV + ++YE +
Sbjct: 43 NKRTQEKFALKMLQDCPKARREVE-----LH-----WRASQCPHIVRIVDVYENLYAGRK 92
Query: 86 -MVLVLEMVPDGEL-QRLVDIQD-GIPEQDTRSYMKQILEALAFLHDHNITHLDLKPQNI 142
+++V+E + GEL R+ D D E++ MK I EA+ +LH NI H D+KP+N+
Sbjct: 93 CLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSINIAHRDVKPENL 152
Query: 143 LLT--KDNNI-KLCDFGISRVVNDVVEVKEIIGTPDYVAPEVLSYEPISLATDMWSVGVL 199
L T + N I KL DFG ++ + TP YVAPEVL E + DMWS+GV+
Sbjct: 153 LYTSKRPNAILKLTDFGFAKETTSHNSLTTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVI 212
Query: 200 AYVLLSSHSPFAGDN------KQETFLNISQCNFSFHEDLFGHISSQAKDFIQSCLVTDP 253
Y+LL + PF ++ +T + + Q F E + +S + K I++ L T+P
Sbjct: 213 MYILLCGYPPFYSNHGLAISPGMKTRIRMGQYEFPNPE--WSEVSEEVKMLIRNLLKTEP 270
>pdb|2OZA|A Chain A, Structure Of P38alpha Complex
Length = 356
Score = 98.2 bits (243), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 68/194 (35%), Positives = 104/194 (53%), Gaps = 14/194 (7%)
Query: 72 RIVGLHE-IYETPHEMVLVLEMVPDGEL-QRLVDIQD-GIPEQDTRSYMKQILEALAFLH 128
RIV ++E +Y +++V+E + GEL R+ D D E++ MK I EA+ +LH
Sbjct: 75 RIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLH 134
Query: 129 DHNITHLDLKPQNILLT--KDNNI-KLCDFGISRVVNDVVEVKEIIGTPDYVAPEVLSYE 185
NI H D+KP+N+L T + N I KL DFG ++ + TP YVAPEVL E
Sbjct: 135 SINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTPCYTPYYVAPEVLGPE 194
Query: 186 PISLATDMWSVGVLAYVLLSSHSPFAGDN------KQETFLNISQCNFSFHEDLFGHISS 239
+ DMWS+GV+ Y+LL + PF ++ +T + + Q F E + +S
Sbjct: 195 KYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQYEFPNPE--WSEVSE 252
Query: 240 QAKDFIQSCLVTDP 253
+ K I++ L T+P
Sbjct: 253 EVKMLIRNLLKTEP 266
>pdb|1J3H|A Chain A, Crystal Structure Of Apoenzyme Camp-Dependent Protein
Kinase Catalytic Subunit
pdb|1J3H|B Chain B, Crystal Structure Of Apoenzyme Camp-Dependent Protein
Kinase Catalytic Subunit
Length = 350
Score = 98.2 bits (243), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 65/232 (28%), Positives = 112/232 (48%), Gaps = 8/232 (3%)
Query: 22 GKFASVRKCTHKITKVEYAAKFIRKRRR-SMDQMQDILHEAAVLYLAQKSERIVGLHEIY 80
G F V HK + YA K + K++ + Q++ L+E +L A +V L +
Sbjct: 52 GSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQ-AVNFPFLVKLEFSF 110
Query: 81 ETPHEMVLVLEMVPDGELQRLVDIQDGIPEQDTRSYMKQILEALAFLHDHNITHLDLKPQ 140
+ + +V+E V GE+ + E R Y QI+ +LH ++ + DLKP+
Sbjct: 111 KDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPE 170
Query: 141 NILLTKDNNIKLCDFGISRVVNDVVEVKEIIGTPDYVAPEVLSYEPISLATDMWSVGVLA 200
N+L+ + I++ DFG ++ V + GTP+Y+APE++ + + A D W++GVL
Sbjct: 171 NLLIDQQGYIQVTDFGFAKRVKG--RTWXLXGTPEYLAPEIILSKGYNKAVDWWALGVLI 228
Query: 201 YVLLSSHSPFAGDNKQETFLNISQCNFSFHEDLFGHISSQAKDFIQSCLVTD 252
Y + + + PF D + + I F H SS KD +++ L D
Sbjct: 229 YEMAAGYPPFFADQPIQIYEKIVSGKVRFP----SHFSSDLKDLLRNLLQVD 276
>pdb|3FPM|A Chain A, Crystal Structure Of A Squarate Inhibitor Bound To Mapkap
Kinase-2
Length = 325
Score = 98.2 bits (243), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 77/240 (32%), Positives = 124/240 (51%), Gaps = 30/240 (12%)
Query: 32 HKITKVEYAAKFIR---KRRRSMDQMQDILHEAAVLYLAQKSERIVGLHEIYETPHE--- 85
+K T+ ++A K ++ K RR ++ LH + A + IV + ++YE +
Sbjct: 44 NKRTQEKFALKMLQDCPKARREVE-----LH-----WRASQCPHIVRIVDVYENLYAGRK 93
Query: 86 -MVLVLEMVPDGEL-QRLVDIQD-GIPEQDTRSYMKQILEALAFLHDHNITHLDLKPQNI 142
+++V+E + GEL R+ D D E++ MK I EA+ +LH NI H D+KP+N+
Sbjct: 94 CLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSINIAHRDVKPENL 153
Query: 143 LLT--KDNNI-KLCDFGISRVVNDVVEVKEIIGTPDYVAPEVLSYEPISLATDMWSVGVL 199
L T + N I KL DFG ++ + TP YVAPEVL E + DMWS+GV+
Sbjct: 154 LYTSKRPNAILKLTDFGFAKETTSHNSLTTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVI 213
Query: 200 AYVLLSSHSPFAGDN------KQETFLNISQCNFSFHEDLFGHISSQAKDFIQSCLVTDP 253
Y+LL + PF ++ +T + + Q F E + +S + K I++ L T+P
Sbjct: 214 MYILLCGYPPFYSNHGLAISPGMKTRIRMGQYEFPNPE--WSEVSEEVKMLIRNLLKTEP 271
>pdb|3FHI|A Chain A, Crystal Structure Of A Complex Between The Catalytic And
Regulatory (Ri{alpha}) Subunits Of Pka
Length = 350
Score = 98.2 bits (243), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 65/232 (28%), Positives = 112/232 (48%), Gaps = 8/232 (3%)
Query: 22 GKFASVRKCTHKITKVEYAAKFIRKRRR-SMDQMQDILHEAAVLYLAQKSERIVGLHEIY 80
G F V HK + YA K + K++ + Q++ L+E +L A +V L +
Sbjct: 52 GSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQ-AVNFPFLVKLEFSF 110
Query: 81 ETPHEMVLVLEMVPDGELQRLVDIQDGIPEQDTRSYMKQILEALAFLHDHNITHLDLKPQ 140
+ + +V+E V GE+ + E R Y QI+ +LH ++ + DLKP+
Sbjct: 111 KDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPE 170
Query: 141 NILLTKDNNIKLCDFGISRVVNDVVEVKEIIGTPDYVAPEVLSYEPISLATDMWSVGVLA 200
N+L+ + I++ DFG ++ V + GTP+Y+APE++ + + A D W++GVL
Sbjct: 171 NLLIDQQGYIQVTDFGFAKRVKG--RTWXLAGTPEYLAPEIILSKGYNKAVDWWALGVLI 228
Query: 201 YVLLSSHSPFAGDNKQETFLNISQCNFSFHEDLFGHISSQAKDFIQSCLVTD 252
Y + + + PF D + + I F H SS KD +++ L D
Sbjct: 229 YEMAAGYPPFFADQPIQIYEKIVSGKVRFP----SHFSSDLKDLLRNLLQVD 276
>pdb|3R2Y|A Chain A, Mk2 Kinase Bound To Compound 1
pdb|3R30|A Chain A, Mk2 Kinase Bound To Compound 2
Length = 319
Score = 98.2 bits (243), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 68/194 (35%), Positives = 104/194 (53%), Gaps = 14/194 (7%)
Query: 72 RIVGLHE-IYETPHEMVLVLEMVPDGEL-QRLVDIQD-GIPEQDTRSYMKQILEALAFLH 128
RIV ++E +Y +++V+E + GEL R+ D D E++ MK I EA+ +LH
Sbjct: 74 RIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLH 133
Query: 129 DHNITHLDLKPQNILLT--KDNNI-KLCDFGISRVVNDVVEVKEIIGTPDYVAPEVLSYE 185
NI H D+KP+N+L T + N I KL DFG ++ + TP YVAPEVL E
Sbjct: 134 SINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTPCYTPYYVAPEVLGPE 193
Query: 186 PISLATDMWSVGVLAYVLLSSHSPFAGDN------KQETFLNISQCNFSFHEDLFGHISS 239
+ DMWS+GV+ Y+LL + PF ++ +T + + Q F E + +S
Sbjct: 194 KYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQYEFPNPE--WSEVSE 251
Query: 240 QAKDFIQSCLVTDP 253
+ K I++ L T+P
Sbjct: 252 EVKMLIRNLLKTEP 265
>pdb|1APM|E Chain E, 2.0 Angstrom Refined Crystal Structure Of The Catalytic
Subunit Of Camp-Dependent Protein Kinase Complexed With
A Peptide Inhibitor And Detergent
Length = 350
Score = 98.2 bits (243), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 65/232 (28%), Positives = 112/232 (48%), Gaps = 8/232 (3%)
Query: 22 GKFASVRKCTHKITKVEYAAKFIRKRRR-SMDQMQDILHEAAVLYLAQKSERIVGLHEIY 80
G F V HK + YA K + K++ + Q++ L+E +L A +V L +
Sbjct: 52 GSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQ-AVNFPFLVKLEFSF 110
Query: 81 ETPHEMVLVLEMVPDGELQRLVDIQDGIPEQDTRSYMKQILEALAFLHDHNITHLDLKPQ 140
+ + +V+E V GE+ + E R Y QI+ +LH ++ + DLKP+
Sbjct: 111 KDNSNLYMVMEYVAGGEMFSHLRRIGRFAEPHARFYAAQIVLTFEYLHSLDLIYRDLKPE 170
Query: 141 NILLTKDNNIKLCDFGISRVVNDVVEVKEIIGTPDYVAPEVLSYEPISLATDMWSVGVLA 200
N+L+ + I++ DFG ++ V + GTP+Y+APE++ + + A D W++GVL
Sbjct: 171 NLLIDQQGYIQVTDFGFAKRVKG--RTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLI 228
Query: 201 YVLLSSHSPFAGDNKQETFLNISQCNFSFHEDLFGHISSQAKDFIQSCLVTD 252
Y + + + PF D + + I F H SS KD +++ L D
Sbjct: 229 YEMAAGYPPFFADQPIQIYEKIVSGKVRFP----SHFSSDLKDLLRNLLQVD 276
>pdb|3CQU|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate
Peptide And Inhibitor
pdb|3CQW|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate
Peptide And Inhibitor
pdb|3MV5|A Chain A, Crystal Structure Of Akt-1-Inhibitor Complexes
pdb|3MVH|A Chain A, Crystal Structure Of Akt-1-Inhibitor Complexes
Length = 342
Score = 97.8 bits (242), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 72/239 (30%), Positives = 111/239 (46%), Gaps = 12/239 (5%)
Query: 20 SRGKFASVRKCTHKITKVEYAAKFIRKRR-RSMDQMQDILHEAAVLYLAQKSER--IVGL 76
+G F V K T YA K ++K + D++ L E VL Q S + L
Sbjct: 19 GKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVL---QNSRHPFLTAL 75
Query: 77 HEIYETPHEMVLVLEMVPDGELQRLVDIQDGIPEQDTRSYMKQILEALAFLH-DHNITHL 135
++T + V+E GEL + + E R Y +I+ AL +LH + N+ +
Sbjct: 76 KYSFQTHDRLCFVMEYANGGELFFHLSRERVFSEDRARFYGAEIVSALDYLHSEKNVVYR 135
Query: 136 DLKPQNILLTKDNNIKLCDFGISR-VVNDVVEVKEIIGTPDYVAPEVLSYEPISLATDMW 194
DLK +N++L KD +IK+ DFG+ + + D +K GTP+Y+APEVL A D W
Sbjct: 136 DLKLENLMLDKDGHIKITDFGLCKEGIKDGATMKXFCGTPEYLAPEVLEDNDYGRAVDWW 195
Query: 195 SVGVLAYVLLSSHSPFAGDNKQETFLNISQCNFSFHEDLFGHISSQAKDFIQSCLVTDP 253
+GV+ Y ++ PF + ++ F I F L +AK + L DP
Sbjct: 196 GLGVVMYEMMCGRLPFYNQDHEKLFELILMEEIRFPRTL----GPEAKSLLSGLLKKDP 250
>pdb|2ONL|C Chain C, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|D Chain D, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
Length = 406
Score = 97.8 bits (242), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 68/194 (35%), Positives = 104/194 (53%), Gaps = 14/194 (7%)
Query: 72 RIVGLHE-IYETPHEMVLVLEMVPDGEL-QRLVDIQD-GIPEQDTRSYMKQILEALAFLH 128
RIV ++E +Y +++V+E + GEL R+ D D E++ MK I EA+ +LH
Sbjct: 125 RIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLH 184
Query: 129 DHNITHLDLKPQNILLT--KDNNI-KLCDFGISRVVNDVVEVKEIIGTPDYVAPEVLSYE 185
NI H D+KP+N+L T + N I KL DFG ++ + TP YVAPEVL E
Sbjct: 185 SINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTPCYTPYYVAPEVLGPE 244
Query: 186 PISLATDMWSVGVLAYVLLSSHSPFAGDN------KQETFLNISQCNFSFHEDLFGHISS 239
+ DMWS+GV+ Y+LL + PF ++ +T + + Q F E + +S
Sbjct: 245 KYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQYEFPNPE--WSEVSE 302
Query: 240 QAKDFIQSCLVTDP 253
+ K I++ L T+P
Sbjct: 303 EVKMLIRNLLKTEP 316
>pdb|2ERZ|E Chain E, Crystal Structure Of C-amp Dependent Kinase (pka) Bound To
Hydroxyfasudil
Length = 351
Score = 97.8 bits (242), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 65/232 (28%), Positives = 112/232 (48%), Gaps = 8/232 (3%)
Query: 22 GKFASVRKCTHKITKVEYAAKFIRKRRR-SMDQMQDILHEAAVLYLAQKSERIVGLHEIY 80
G F V HK + YA K + K++ + Q++ L+E +L A +V L +
Sbjct: 53 GSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQ-AVNFPFLVKLEFSF 111
Query: 81 ETPHEMVLVLEMVPDGELQRLVDIQDGIPEQDTRSYMKQILEALAFLHDHNITHLDLKPQ 140
+ + +V+E V GE+ + E R Y QI+ +LH ++ + DLKP+
Sbjct: 112 KDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPE 171
Query: 141 NILLTKDNNIKLCDFGISRVVNDVVEVKEIIGTPDYVAPEVLSYEPISLATDMWSVGVLA 200
N+L+ + I++ DFG ++ V + GTP+Y+APE++ + + A D W++GVL
Sbjct: 172 NLLIDQQGYIQVTDFGFAKRVKG--RTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLI 229
Query: 201 YVLLSSHSPFAGDNKQETFLNISQCNFSFHEDLFGHISSQAKDFIQSCLVTD 252
Y + + + PF D + + I F H SS KD +++ L D
Sbjct: 230 YEMAAGYPPFFADQPIQIYEKIVSGKVRFP----SHFSSDLKDLLRNLLQVD 277
>pdb|3QAL|E Chain E, Crystal Structure Of Arg280ala Mutant Of Catalytic Subunit
Of Camp- Dependent Protein Kinase
Length = 350
Score = 97.8 bits (242), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 65/232 (28%), Positives = 112/232 (48%), Gaps = 8/232 (3%)
Query: 22 GKFASVRKCTHKITKVEYAAKFIRKRRR-SMDQMQDILHEAAVLYLAQKSERIVGLHEIY 80
G F V HK + YA K + K++ + Q++ L+E +L A +V L +
Sbjct: 52 GSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQ-AVNFPFLVKLEFSF 110
Query: 81 ETPHEMVLVLEMVPDGELQRLVDIQDGIPEQDTRSYMKQILEALAFLHDHNITHLDLKPQ 140
+ + +V+E V GE+ + E R Y QI+ +LH ++ + DLKP+
Sbjct: 111 KDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPE 170
Query: 141 NILLTKDNNIKLCDFGISRVVNDVVEVKEIIGTPDYVAPEVLSYEPISLATDMWSVGVLA 200
N+L+ + I++ DFG ++ V + GTP+Y+APE++ + + A D W++GVL
Sbjct: 171 NLLIDQQGYIQVTDFGFAKRVKG--RTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLI 228
Query: 201 YVLLSSHSPFAGDNKQETFLNISQCNFSFHEDLFGHISSQAKDFIQSCLVTD 252
Y + + + PF D + + I F H SS KD +++ L D
Sbjct: 229 YEMAAGYPPFFADQPIQIYEKIVSGKVRFP----SHFSSDLKDLLRNLLQVD 276
>pdb|2AC3|A Chain A, Structure Of Human Mnk2 Kinase Domain
Length = 316
Score = 97.8 bits (242), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 77/264 (29%), Positives = 117/264 (44%), Gaps = 33/264 (12%)
Query: 20 SRGKFASVRKCTHKITKVEYAAKFIRKRRRSMDQMQDILHEAAVLYLAQKSERIVGLHEI 79
G A V+ C + IT EYA K I K+ + + E +LY Q ++ L E
Sbjct: 22 GEGAHARVQTCINLITSQEYAVKIIEKQPGHIRSR--VFREVEMLYQCQGHRNVLELIEF 79
Query: 80 YETPHEMVLVLEMVPDGELQRLVDIQDGIPEQDTRSYMKQILEALAFLHDHNITHLDLKP 139
+E LV E + G + + + E + ++ + AL FLH+ I H DLKP
Sbjct: 80 FEEEDRFYLVFEKMRGGSILSHIHKRRHFNELEASVVVQDVASALDFLHNKGIAHRDLKP 139
Query: 140 QNILLTKDNN---IKLCDFGISRVVN--------DVVEVKEIIGTPDYVAPEVLSY--EP 186
+NIL N +K+CDF + + E+ G+ +Y+APEV+ E
Sbjct: 140 ENILCEHPNQVSPVKICDFDLGSGIKLNGDCSPISTPELLTPCGSAEYMAPEVVEAFSEE 199
Query: 187 ISL---ATDMWSVGVLAYVLLSSHSPFAGDNKQET---------------FLNISQCNFS 228
S+ D+WS+GV+ Y+LLS + PF G + F +I + +
Sbjct: 200 ASIYDKRCDLWSLGVILYILLSGYPPFVGRCGSDCGWDRGEACPACQNMLFESIQEGKYE 259
Query: 229 FHEDLFGHISSQAKDFIQSCLVTD 252
F + + HIS AKD I LV D
Sbjct: 260 FPDKDWAHISCAAKDLISKLLVRD 283
>pdb|1SYK|A Chain A, Crystal Structure Of E230q Mutant Of Camp-Dependent
Protein Kinase Reveals Unexpected Apoenzyme Conformation
pdb|1SYK|B Chain B, Crystal Structure Of E230q Mutant Of Camp-Dependent
Protein Kinase Reveals Unexpected Apoenzyme Conformation
Length = 350
Score = 97.8 bits (242), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 65/232 (28%), Positives = 112/232 (48%), Gaps = 8/232 (3%)
Query: 22 GKFASVRKCTHKITKVEYAAKFIRKRRR-SMDQMQDILHEAAVLYLAQKSERIVGLHEIY 80
G F V HK + YA K + K++ + Q++ L+E +L A +V L +
Sbjct: 52 GSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQ-AVNFPFLVKLEFSF 110
Query: 81 ETPHEMVLVLEMVPDGELQRLVDIQDGIPEQDTRSYMKQILEALAFLHDHNITHLDLKPQ 140
+ + +V+E V GE+ + E R Y QI+ +LH ++ + DLKP+
Sbjct: 111 KDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPE 170
Query: 141 NILLTKDNNIKLCDFGISRVVNDVVEVKEIIGTPDYVAPEVLSYEPISLATDMWSVGVLA 200
N+L+ + I++ DFG ++ V + GTP+Y+APE++ + + A D W++GVL
Sbjct: 171 NLLIDQQGYIQVTDFGFAKRVKG--RTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLI 228
Query: 201 YVLLSSHSPFAGDNKQETFLNISQCNFSFHEDLFGHISSQAKDFIQSCLVTD 252
Y + + + PF D + + I F H SS KD +++ L D
Sbjct: 229 YQMAAGYPPFFADQPIQIYEKIVSGKVRFP----SHFSSDLKDLLRNLLQVD 276
>pdb|1FMO|E Chain E, Crystal Structure Of A Polyhistidine-Tagged Recombinant
Catalytic Subunit Of Camp-Dependent Protein Kinase
Complexed With The Peptide Inhibitor Pki(5-24) And
Adenosine
pdb|1JLU|E Chain E, Crystal Structure Of The Catalytic Subunit Of
Camp-dependent Protein Kinase Complexed With A
Phosphorylated Substrate Peptide And Detergent
pdb|1RE8|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 2
pdb|1REJ|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 1
pdb|1REK|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 8
pdb|2QVS|E Chain E, Crystal Structure Of Type Iia Holoenzyme Of Camp-Dependent
Protein Kinase
pdb|3FJQ|E Chain E, Crystal Structure Of Camp-Dependent Protein Kinase
Catalytic Subunit Alpha In Complex With Peptide
Inhibitor Pki Alpha (6-25)
pdb|3IDB|A Chain A, Crystal Structure Of (108-268)riib:c Holoenzyme Of Camp-
Dependent Protein Kinase
pdb|3IDC|A Chain A, Crystal Structure Of (102-265)riib:c Holoenzyme Of Camp-
Dependent Protein Kinase
pdb|3O7L|D Chain D, Crystal Structure Of Phospholamban (1-19):pka
C-Subunit:amp-Pnp:mg2+ Complex
pdb|3OW3|A Chain A, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|1ATP|E Chain E, 2.2 Angstrom Refined Crystal Structure Of The Catalytic
Subunit Of Camp-Dependent Protein Kinase Complexed With
Mnatp And A Peptide Inhibitor
pdb|4DIN|A Chain A, Novel Localization And Quaternary Structure Of The Pka Ri
Beta Holoenzyme
Length = 350
Score = 97.8 bits (242), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 65/232 (28%), Positives = 112/232 (48%), Gaps = 8/232 (3%)
Query: 22 GKFASVRKCTHKITKVEYAAKFIRKRRR-SMDQMQDILHEAAVLYLAQKSERIVGLHEIY 80
G F V HK + YA K + K++ + Q++ L+E +L A +V L +
Sbjct: 52 GSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQ-AVNFPFLVKLEFSF 110
Query: 81 ETPHEMVLVLEMVPDGELQRLVDIQDGIPEQDTRSYMKQILEALAFLHDHNITHLDLKPQ 140
+ + +V+E V GE+ + E R Y QI+ +LH ++ + DLKP+
Sbjct: 111 KDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPE 170
Query: 141 NILLTKDNNIKLCDFGISRVVNDVVEVKEIIGTPDYVAPEVLSYEPISLATDMWSVGVLA 200
N+L+ + I++ DFG ++ V + GTP+Y+APE++ + + A D W++GVL
Sbjct: 171 NLLIDQQGYIQVTDFGFAKRVKG--RTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLI 228
Query: 201 YVLLSSHSPFAGDNKQETFLNISQCNFSFHEDLFGHISSQAKDFIQSCLVTD 252
Y + + + PF D + + I F H SS KD +++ L D
Sbjct: 229 YEMAAGYPPFFADQPIQIYEKIVSGKVRFP----SHFSSDLKDLLRNLLQVD 276
>pdb|1BKX|A Chain A, A Binary Complex Of The Catalytic Subunit Of
Camp-Dependent Protein Kinase And Adenosine Further
Defines Conformational Flexibility
pdb|1BX6|A Chain A, Crystal Structure Of The Potent Natural Product Inhibitor
Balanol In Complex With The Catalytic Subunit Of Camp-
Dependent Protein Kinase
Length = 350
Score = 97.8 bits (242), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 65/232 (28%), Positives = 112/232 (48%), Gaps = 8/232 (3%)
Query: 22 GKFASVRKCTHKITKVEYAAKFIRKRRR-SMDQMQDILHEAAVLYLAQKSERIVGLHEIY 80
G F V HK + YA K + K++ + Q++ L+E +L A +V L +
Sbjct: 52 GSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQ-AVNFPFLVKLEFSF 110
Query: 81 ETPHEMVLVLEMVPDGELQRLVDIQDGIPEQDTRSYMKQILEALAFLHDHNITHLDLKPQ 140
+ + +V+E V GE+ + E R Y QI+ +LH ++ + DLKP+
Sbjct: 111 KDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPE 170
Query: 141 NILLTKDNNIKLCDFGISRVVNDVVEVKEIIGTPDYVAPEVLSYEPISLATDMWSVGVLA 200
N+L+ + I++ DFG ++ V + GTP+Y+APE++ + + A D W++GVL
Sbjct: 171 NLLIDQQGYIQVTDFGFAKRVKG--RTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLI 228
Query: 201 YVLLSSHSPFAGDNKQETFLNISQCNFSFHEDLFGHISSQAKDFIQSCLVTD 252
Y + + + PF D + + I F H SS KD +++ L D
Sbjct: 229 YEMAAGYPPFFADQPIQIYEKIVSGKVRFP----SHFSSDLKDLLRNLLQVD 276
>pdb|2P3G|X Chain X, Crystal Structure Of A Pyrrolopyridine Inhibitor Bound To
Mapkap Kinase-2
pdb|3FYJ|X Chain X, Crystal Structure Of An Optimzied Benzothiophene Inhibitor
Bound To Mapkap Kinase-2 (Mk-2)
pdb|3FYK|X Chain X, Crystal Structure Of A Benzthiophene Lead Bound To Mapkap
Kinase-2 (Mk-2)
Length = 327
Score = 97.8 bits (242), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 68/194 (35%), Positives = 104/194 (53%), Gaps = 14/194 (7%)
Query: 72 RIVGLHE-IYETPHEMVLVLEMVPDGEL-QRLVDIQD-GIPEQDTRSYMKQILEALAFLH 128
RIV ++E +Y +++V+E + GEL R+ D D E++ MK I EA+ +LH
Sbjct: 75 RIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLH 134
Query: 129 DHNITHLDLKPQNILLT--KDNNI-KLCDFGISRVVNDVVEVKEIIGTPDYVAPEVLSYE 185
NI H D+KP+N+L T + N I KL DFG ++ + TP YVAPEVL E
Sbjct: 135 SINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTPCYTPYYVAPEVLGPE 194
Query: 186 PISLATDMWSVGVLAYVLLSSHSPFAGDN------KQETFLNISQCNFSFHEDLFGHISS 239
+ DMWS+GV+ Y+LL + PF ++ +T + + Q F E + +S
Sbjct: 195 KYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQYEFPNPE--WSEVSE 252
Query: 240 QAKDFIQSCLVTDP 253
+ K I++ L T+P
Sbjct: 253 EVKMLIRNLLKTEP 266
>pdb|2JDT|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl) Amide
pdb|2JDV|A Chain A, Structure Of Pka-Pkb Chimera Complexed With A-443654
pdb|2UVX|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 7-Azaindole
pdb|2UW4|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
2-(4-(5-Methyl- 1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW7|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 4-(4-Chloro-
Phenyl)-4-(4-(1h-Pyrazol-4-Yl)-Phenyl)-Piperidine
pdb|4AXA|A Chain A, Structure Of Pka-pkb Chimera Complexed With
(1s)-2-amino-1-(
4-chlorophenyl)-1-(4-(1h-pyrazol-4-yl)phenyl)ethan-1-ol
Length = 351
Score = 97.8 bits (242), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 64/232 (27%), Positives = 110/232 (47%), Gaps = 8/232 (3%)
Query: 22 GKFASVRKCTHKITKVEYAAKFIRKRRR-SMDQMQDILHEAAVLYLAQKSERIVGLHEIY 80
G F V H T YA K + K++ + Q++ L+E +L A + L +
Sbjct: 53 GSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQ-AVNFPFLTKLEFSF 111
Query: 81 ETPHEMVLVLEMVPDGELQRLVDIQDGIPEQDTRSYMKQILEALAFLHDHNITHLDLKPQ 140
+ + +V+E P GE+ + E R Y QI+ +LH ++ + DLKP+
Sbjct: 112 KDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPE 171
Query: 141 NILLTKDNNIKLCDFGISRVVNDVVEVKEIIGTPDYVAPEVLSYEPISLATDMWSVGVLA 200
N+++ + IK+ DFG ++ V + GTP+Y+APE++ + + A D W++GVL
Sbjct: 172 NLMIDQQGYIKVTDFGFAKRVKG--RTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLI 229
Query: 201 YVLLSSHSPFAGDNKQETFLNISQCNFSFHEDLFGHISSQAKDFIQSCLVTD 252
Y + + + PF D + + I F H SS KD +++ L D
Sbjct: 230 YEMAAGYPPFFADQPIQIYEKIVSGKVRFP----SHFSSDLKDLLRNLLQVD 277
>pdb|2QUR|A Chain A, Crystal Structure Of F327aK285P MUTANT OF CAMP-Dependent
Protein Kinase
Length = 350
Score = 97.8 bits (242), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 65/232 (28%), Positives = 112/232 (48%), Gaps = 8/232 (3%)
Query: 22 GKFASVRKCTHKITKVEYAAKFIRKRRR-SMDQMQDILHEAAVLYLAQKSERIVGLHEIY 80
G F V HK + YA K + K++ + Q++ L+E +L A +V L +
Sbjct: 52 GSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQ-AVNFPFLVKLEFSF 110
Query: 81 ETPHEMVLVLEMVPDGELQRLVDIQDGIPEQDTRSYMKQILEALAFLHDHNITHLDLKPQ 140
+ + +V+E V GE+ + E R Y QI+ +LH ++ + DLKP+
Sbjct: 111 KDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPE 170
Query: 141 NILLTKDNNIKLCDFGISRVVNDVVEVKEIIGTPDYVAPEVLSYEPISLATDMWSVGVLA 200
N+L+ + I++ DFG ++ V + GTP+Y+APE++ + + A D W++GVL
Sbjct: 171 NLLIDQQGYIQVTDFGFAKRVKG--RTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLI 228
Query: 201 YVLLSSHSPFAGDNKQETFLNISQCNFSFHEDLFGHISSQAKDFIQSCLVTD 252
Y + + + PF D + + I F H SS KD +++ L D
Sbjct: 229 YEMAAGYPPFFADQPIQIYEKIVSGKVRFP----SHFSSDLKDLLRNLLQVD 276
>pdb|3PVB|A Chain A, Crystal Structure Of (73-244)ria:c Holoenzyme Of
Camp-Dependent Protein Kinase
Length = 345
Score = 97.8 bits (242), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 65/232 (28%), Positives = 112/232 (48%), Gaps = 8/232 (3%)
Query: 22 GKFASVRKCTHKITKVEYAAKFIRKRRR-SMDQMQDILHEAAVLYLAQKSERIVGLHEIY 80
G F V HK + YA K + K++ + Q++ L+E +L A +V L +
Sbjct: 47 GSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQ-AVNFPFLVKLEFSF 105
Query: 81 ETPHEMVLVLEMVPDGELQRLVDIQDGIPEQDTRSYMKQILEALAFLHDHNITHLDLKPQ 140
+ + +V+E V GE+ + E R Y QI+ +LH ++ + DLKP+
Sbjct: 106 KDNSNLYMVMEYVAGGEMFSHLRRIGRFXEPHARFYAAQIVLTFEYLHSLDLIYRDLKPE 165
Query: 141 NILLTKDNNIKLCDFGISRVVNDVVEVKEIIGTPDYVAPEVLSYEPISLATDMWSVGVLA 200
N+L+ + I++ DFG ++ V + GTP+Y+APE++ + + A D W++GVL
Sbjct: 166 NLLIDQQGYIQVTDFGFAKRVKG--RTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLI 223
Query: 201 YVLLSSHSPFAGDNKQETFLNISQCNFSFHEDLFGHISSQAKDFIQSCLVTD 252
Y + + + PF D + + I F H SS KD +++ L D
Sbjct: 224 YEMAAGYPPFFADQPIQIYEKIVSGKVRFP----SHFSSDLKDLLRNLLQVD 271
>pdb|4EJN|A Chain A, Crystal Structure Of Autoinhibited Form Of Akt1 In Complex
With N-(4-
(5-(3-Acetamidophenyl)-2-(2-Aminopyridin-3-Yl)-3h-
Imidazo[4,5- B]pyridin-3-Yl)benzyl)-3-Fluorobenzamide
Length = 446
Score = 97.8 bits (242), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 72/239 (30%), Positives = 111/239 (46%), Gaps = 12/239 (5%)
Query: 20 SRGKFASVRKCTHKITKVEYAAKFIRKRR-RSMDQMQDILHEAAVLYLAQKSER--IVGL 76
+G F V K T YA K ++K + D++ L E VL Q S + L
Sbjct: 157 GKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVL---QNSRHPFLTAL 213
Query: 77 HEIYETPHEMVLVLEMVPDGELQRLVDIQDGIPEQDTRSYMKQILEALAFLH-DHNITHL 135
++T + V+E GEL + + E R Y +I+ AL +LH + N+ +
Sbjct: 214 KYSFQTHDRLCFVMEYANGGELFFHLSRERVFSEDRARFYGAEIVSALDYLHSEKNVVYR 273
Query: 136 DLKPQNILLTKDNNIKLCDFGISRV-VNDVVEVKEIIGTPDYVAPEVLSYEPISLATDMW 194
DLK +N++L KD +IK+ DFG+ + + D +K GTP+Y+APEVL A D W
Sbjct: 274 DLKLENLMLDKDGHIKITDFGLCKEGIKDGATMKTFCGTPEYLAPEVLEDNDYGRAVDWW 333
Query: 195 SVGVLAYVLLSSHSPFAGDNKQETFLNISQCNFSFHEDLFGHISSQAKDFIQSCLVTDP 253
+GV+ Y ++ PF + ++ F I F L +AK + L DP
Sbjct: 334 GLGVVMYEMMCGRLPFYNQDHEKLFELILMEEIRFPRTL----GPEAKSLLSGLLKKDP 388
>pdb|1JBP|E Chain E, Crystal Structure Of The Catalytic Subunit Of Camp-
Dependent Protein Kinase Complexed With A Substrate
Peptide, Adp And Detergent
Length = 350
Score = 97.8 bits (242), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 65/232 (28%), Positives = 112/232 (48%), Gaps = 8/232 (3%)
Query: 22 GKFASVRKCTHKITKVEYAAKFIRKRRR-SMDQMQDILHEAAVLYLAQKSERIVGLHEIY 80
G F V HK + YA K + K++ + Q++ L+E +L A +V L +
Sbjct: 52 GSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQ-AVNFPFLVKLEFSF 110
Query: 81 ETPHEMVLVLEMVPDGELQRLVDIQDGIPEQDTRSYMKQILEALAFLHDHNITHLDLKPQ 140
+ + +V+E V GE+ + E R Y QI+ +LH ++ + DLKP+
Sbjct: 111 KDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPE 170
Query: 141 NILLTKDNNIKLCDFGISRVVNDVVEVKEIIGTPDYVAPEVLSYEPISLATDMWSVGVLA 200
N+L+ + I++ DFG ++ V + GTP+Y+APE++ + + A D W++GVL
Sbjct: 171 NLLIDQQGYIQVTDFGFAKRVKG--RTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLI 228
Query: 201 YVLLSSHSPFAGDNKQETFLNISQCNFSFHEDLFGHISSQAKDFIQSCLVTD 252
Y + + + PF D + + I F H SS KD +++ L D
Sbjct: 229 YEMAAGYPPFFADEPIQIYEKIVSGKVRFP----SHFSSDLKDLLRNLLQVD 276
>pdb|4DG3|E Chain E, Crystal Structure Of R336a Mutant Of Camp-dependent
Protein Kinase With Unphosphorylated Turn Motif
Length = 371
Score = 97.8 bits (242), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 65/232 (28%), Positives = 112/232 (48%), Gaps = 8/232 (3%)
Query: 22 GKFASVRKCTHKITKVEYAAKFIRKRRR-SMDQMQDILHEAAVLYLAQKSERIVGLHEIY 80
G F V HK + YA K + K++ + Q++ L+E +L A +V L +
Sbjct: 73 GSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQ-AVNFPFLVKLEFSF 131
Query: 81 ETPHEMVLVLEMVPDGELQRLVDIQDGIPEQDTRSYMKQILEALAFLHDHNITHLDLKPQ 140
+ + +V+E V GE+ + E R Y QI+ +LH ++ + DLKP+
Sbjct: 132 KDNSNLYMVMEYVAGGEMFSHLRRIGRFXEPHARFYAAQIVLTFEYLHSLDLIYRDLKPE 191
Query: 141 NILLTKDNNIKLCDFGISRVVNDVVEVKEIIGTPDYVAPEVLSYEPISLATDMWSVGVLA 200
N+L+ + I++ DFG ++ V + GTP+Y+APE++ + + A D W++GVL
Sbjct: 192 NLLIDQQGYIQVTDFGFAKRVKG--RTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLI 249
Query: 201 YVLLSSHSPFAGDNKQETFLNISQCNFSFHEDLFGHISSQAKDFIQSCLVTD 252
Y + + + PF D + + I F H SS KD +++ L D
Sbjct: 250 YEMAAGYPPFFADQPIQIYEKIVSGKVRFPS----HFSSDLKDLLRNLLQVD 297
>pdb|2VO0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4-
Chlorophenyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine
Length = 351
Score = 97.8 bits (242), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 64/232 (27%), Positives = 110/232 (47%), Gaps = 8/232 (3%)
Query: 22 GKFASVRKCTHKITKVEYAAKFIRKRRR-SMDQMQDILHEAAVLYLAQKSERIVGLHEIY 80
G F V H T YA K + K++ + Q++ L+E +L A + L +
Sbjct: 53 GSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQ-AVNFPFLTKLEFSF 111
Query: 81 ETPHEMVLVLEMVPDGELQRLVDIQDGIPEQDTRSYMKQILEALAFLHDHNITHLDLKPQ 140
+ + +V+E P GE+ + E R Y QI+ +LH ++ + DLKP+
Sbjct: 112 KDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPE 171
Query: 141 NILLTKDNNIKLCDFGISRVVNDVVEVKEIIGTPDYVAPEVLSYEPISLATDMWSVGVLA 200
N+++ + IK+ DFG ++ V + GTP+Y+APE++ + + A D W++GVL
Sbjct: 172 NLMIDQQGYIKVTDFGFAKRVKG--RTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLI 229
Query: 201 YVLLSSHSPFAGDNKQETFLNISQCNFSFHEDLFGHISSQAKDFIQSCLVTD 252
Y + + + PF D + + I F H SS KD +++ L D
Sbjct: 230 YEMAAGYPPFFADQPIQIYEKIVSGKVRFP----SHFSSDLKDLLRNLLQVD 277
>pdb|1Q24|A Chain A, Pka Double Mutant Model Of Pkb In Complex With Mgatp
pdb|1Q62|A Chain A, Pka Double Mutant Model Of Pkb
Length = 350
Score = 97.8 bits (242), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 64/232 (27%), Positives = 111/232 (47%), Gaps = 8/232 (3%)
Query: 22 GKFASVRKCTHKITKVEYAAKFIRKRRR-SMDQMQDILHEAAVLYLAQKSERIVGLHEIY 80
G F V H T YA K + K++ + Q++ L+E +L A +V L +
Sbjct: 52 GSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQ-AVNFPFLVKLEFSF 110
Query: 81 ETPHEMVLVLEMVPDGELQRLVDIQDGIPEQDTRSYMKQILEALAFLHDHNITHLDLKPQ 140
+ + +V+E P GE+ + E R Y QI+ +LH ++ + DLKP+
Sbjct: 111 KDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPE 170
Query: 141 NILLTKDNNIKLCDFGISRVVNDVVEVKEIIGTPDYVAPEVLSYEPISLATDMWSVGVLA 200
N+++ + I++ DFG ++ V + GTP+Y+APE++ + + A D W++GVL
Sbjct: 171 NLMIDQQGYIQVTDFGFAKRVKG--RTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLI 228
Query: 201 YVLLSSHSPFAGDNKQETFLNISQCNFSFHEDLFGHISSQAKDFIQSCLVTD 252
Y + + + PF D + + I F H SS KD +++ L D
Sbjct: 229 YEMAAGYPPFFADQPIQIYEKIVSGKVRFP----SHFSSDLKDLLRNLLQVD 276
>pdb|4DFX|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit
Of Camp- Dependent Protein Kinase In Complex With Sp20
And Amp-Pnp
pdb|4DFZ|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit
Of Camp- Dependent Protein Kinase In Complex With Sp20
Length = 350
Score = 97.8 bits (242), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 65/232 (28%), Positives = 112/232 (48%), Gaps = 8/232 (3%)
Query: 22 GKFASVRKCTHKITKVEYAAKFIRKRRR-SMDQMQDILHEAAVLYLAQKSERIVGLHEIY 80
G F V HK + YA K + K++ + Q++ L+E +L A +V L +
Sbjct: 52 GSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQ-AVNFPFLVKLEFSF 110
Query: 81 ETPHEMVLVLEMVPDGELQRLVDIQDGIPEQDTRSYMKQILEALAFLHDHNITHLDLKPQ 140
+ + +V+E V GE+ + E R Y QI+ +LH ++ + DLKP+
Sbjct: 111 KDNSNLYMVMEYVAGGEMFSHLRRIGRFXEPHARFYAAQIVLTFEYLHSLDLIYRDLKPE 170
Query: 141 NILLTKDNNIKLCDFGISRVVNDVVEVKEIIGTPDYVAPEVLSYEPISLATDMWSVGVLA 200
N+L+ + I++ DFG ++ V + GTP+Y+APE++ + + A D W++GVL
Sbjct: 171 NLLIDQQGYIQVTDFGFAKRVKG--RTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLI 228
Query: 201 YVLLSSHSPFAGDNKQETFLNISQCNFSFHEDLFGHISSQAKDFIQSCLVTD 252
Y + + + PF D + + I F H SS KD +++ L D
Sbjct: 229 YEMAAGYPPFFADQPIQIYEKIVSGKVRFP----SHFSSDLKDLLRNLLQVD 276
>pdb|2QCS|A Chain A, A Complex Structure Between The Catalytic And Regulatory
Subunit Of Protein Kinase A That Represents The
Inhibited State
pdb|2CPK|E Chain E, Crystal Structure Of The Catalytic Subunit Of Cyclic
Adenosine Monophosphate-Dependent Protein Kinase
pdb|4DG0|E Chain E, Crystal Structure Of Myristoylated Wt Catalytic Subunit Of
Camp- Dependent Protein Kinase In Complex With Sp20 And
Amp-Pnp
pdb|4DG2|E Chain E, Crystal Structure Of Myristoylated Wt Catalytic Subunit Of
Camp- Dependent Protein Kinase In Complex With Sp20
pdb|4DH1|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With Low Mg2+, Atp And Ip20
pdb|4DH3|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Atp And Ip20
pdb|4DH5|A Chain A, Room Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Adp,
Phosphate, And Ip20
pdb|4DH7|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Amp-pnp And
Ip20'
pdb|4DH8|A Chain A, Room Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Amp-pnp And
Ip20
Length = 350
Score = 97.4 bits (241), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 65/232 (28%), Positives = 112/232 (48%), Gaps = 8/232 (3%)
Query: 22 GKFASVRKCTHKITKVEYAAKFIRKRRR-SMDQMQDILHEAAVLYLAQKSERIVGLHEIY 80
G F V HK + YA K + K++ + Q++ L+E +L A +V L +
Sbjct: 52 GSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQ-AVNFPFLVKLEFSF 110
Query: 81 ETPHEMVLVLEMVPDGELQRLVDIQDGIPEQDTRSYMKQILEALAFLHDHNITHLDLKPQ 140
+ + +V+E V GE+ + E R Y QI+ +LH ++ + DLKP+
Sbjct: 111 KDNSNLYMVMEYVAGGEMFSHLRRIGRFXEPHARFYAAQIVLTFEYLHSLDLIYRDLKPE 170
Query: 141 NILLTKDNNIKLCDFGISRVVNDVVEVKEIIGTPDYVAPEVLSYEPISLATDMWSVGVLA 200
N+L+ + I++ DFG ++ V + GTP+Y+APE++ + + A D W++GVL
Sbjct: 171 NLLIDQQGYIQVTDFGFAKRVKG--RTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLI 228
Query: 201 YVLLSSHSPFAGDNKQETFLNISQCNFSFHEDLFGHISSQAKDFIQSCLVTD 252
Y + + + PF D + + I F H SS KD +++ L D
Sbjct: 229 YEMAAGYPPFFADQPIQIYEKIVSGKVRFP----SHFSSDLKDLLRNLLQVD 276
>pdb|1L3R|E Chain E, Crystal Structure Of A Transition State Mimic Of The
Catalytic Subunit Of Camp-Dependent Protein Kinase
pdb|3TNP|C Chain C, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
pdb|3TNP|F Chain F, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
pdb|3TNQ|B Chain B, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
Length = 350
Score = 97.4 bits (241), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 65/232 (28%), Positives = 112/232 (48%), Gaps = 8/232 (3%)
Query: 22 GKFASVRKCTHKITKVEYAAKFIRKRRR-SMDQMQDILHEAAVLYLAQKSERIVGLHEIY 80
G F V HK + YA K + K++ + Q++ L+E +L A +V L +
Sbjct: 52 GSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQ-AVNFPFLVKLEFSF 110
Query: 81 ETPHEMVLVLEMVPDGELQRLVDIQDGIPEQDTRSYMKQILEALAFLHDHNITHLDLKPQ 140
+ + +V+E V GE+ + E R Y QI+ +LH ++ + DLKP+
Sbjct: 111 KDNSNLYMVMEYVAGGEMFSHLRRIGRFXEPHARFYAAQIVLTFEYLHSLDLIYRDLKPE 170
Query: 141 NILLTKDNNIKLCDFGISRVVNDVVEVKEIIGTPDYVAPEVLSYEPISLATDMWSVGVLA 200
N+L+ + I++ DFG ++ V + GTP+Y+APE++ + + A D W++GVL
Sbjct: 171 NLLIDQQGYIQVTDFGFAKRVKG--RTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLI 228
Query: 201 YVLLSSHSPFAGDNKQETFLNISQCNFSFHEDLFGHISSQAKDFIQSCLVTD 252
Y + + + PF D + + I F H SS KD +++ L D
Sbjct: 229 YEMAAGYPPFFADQPIQIYEKIVSGKVRFP----SHFSSDLKDLLRNLLQVD 276
>pdb|3O96|A Chain A, Crystal Structure Of Human Akt1 With An Allosteric
Inhibitor
Length = 446
Score = 97.4 bits (241), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 72/239 (30%), Positives = 111/239 (46%), Gaps = 12/239 (5%)
Query: 20 SRGKFASVRKCTHKITKVEYAAKFIRKRR-RSMDQMQDILHEAAVLYLAQKSER--IVGL 76
+G F V K T YA K ++K + D++ L E VL Q S + L
Sbjct: 160 GKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVL---QNSRHPFLTAL 216
Query: 77 HEIYETPHEMVLVLEMVPDGELQRLVDIQDGIPEQDTRSYMKQILEALAFLH-DHNITHL 135
++T + V+E GEL + + E R Y +I+ AL +LH + N+ +
Sbjct: 217 KYSFQTHDRLCFVMEYANGGELFFHLSRERVFSEDRARFYGAEIVSALDYLHSEKNVVYR 276
Query: 136 DLKPQNILLTKDNNIKLCDFGISRV-VNDVVEVKEIIGTPDYVAPEVLSYEPISLATDMW 194
DLK +N++L KD +IK+ DFG+ + + D +K GTP+Y+APEVL A D W
Sbjct: 277 DLKLENLMLDKDGHIKITDFGLCKEGIKDGATMKTFCGTPEYLAPEVLEDNDYGRAVDWW 336
Query: 195 SVGVLAYVLLSSHSPFAGDNKQETFLNISQCNFSFHEDLFGHISSQAKDFIQSCLVTDP 253
+GV+ Y ++ PF + ++ F I F L +AK + L DP
Sbjct: 337 GLGVVMYEMMCGRLPFYNQDHEKLFELILMEEIRFPRTL----GPEAKSLLSGLLKKDP 391
>pdb|2UVY|A Chain A, Structure Of Pka-pkb Chimera Complexed With Methyl-(4-(9h-
Purin-6-yl)-benzyl)-amine
pdb|2UVZ|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
C-Phenyl-C-(4-( 9h-Purin-6-Yl)-Phenyl)-Methylamine
pdb|2UW0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 6-(4-(4-(4-
Chloro-Phenyl)-Piperidin-4-Yl)-Phenyl)-9h-Purine
pdb|2UW3|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 5-Methyl-4-
Phenyl-1h-Pyrazole
pdb|2UW5|A Chain A, Structure Of Pka-Pkb Chimera Complexed With (R)-2-(4-
Chloro-Phenyl)-2-(4-1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW6|A Chain A, Structure Of Pka-Pkb Chimera Complexed With (S)-2-(4-
Chloro-Phenyl)-2-(4-1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW8|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 2-(4-Chloro-
Phenyl)-2-Phenyl-Ethylamine
pdb|2VNW|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
(1-(9h-Purin-6- Yl)piperidin-4-Yl)methanamine
pdb|2VNY|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
(1-(9h-Purin-6- Yl)piperidin-4-Yl)amine
pdb|2VO3|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4-
Chlorophenyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine
pdb|2VO6|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 4-(4-
Chlorobenzyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Ylamine
Length = 351
Score = 97.4 bits (241), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 64/232 (27%), Positives = 110/232 (47%), Gaps = 8/232 (3%)
Query: 22 GKFASVRKCTHKITKVEYAAKFIRKRRR-SMDQMQDILHEAAVLYLAQKSERIVGLHEIY 80
G F V H T YA K + K++ + Q++ L+E +L A + L +
Sbjct: 53 GSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQ-AVNFPFLTKLEFSF 111
Query: 81 ETPHEMVLVLEMVPDGELQRLVDIQDGIPEQDTRSYMKQILEALAFLHDHNITHLDLKPQ 140
+ + +V+E P GE+ + E R Y QI+ +LH ++ + DLKP+
Sbjct: 112 KDNSNLYMVMEYAPGGEMFSHLRRIGRFXEPHARFYAAQIVLTFEYLHSLDLIYRDLKPE 171
Query: 141 NILLTKDNNIKLCDFGISRVVNDVVEVKEIIGTPDYVAPEVLSYEPISLATDMWSVGVLA 200
N+++ + IK+ DFG ++ V + GTP+Y+APE++ + + A D W++GVL
Sbjct: 172 NLMIDQQGYIKVTDFGFAKRVKG--RTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLI 229
Query: 201 YVLLSSHSPFAGDNKQETFLNISQCNFSFHEDLFGHISSQAKDFIQSCLVTD 252
Y + + + PF D + + I F H SS KD +++ L D
Sbjct: 230 YEMAAGYPPFFADQPIQIYEKIVSGKVRFP----SHFSSDLKDLLRNLLQVD 277
>pdb|3O7L|B Chain B, Crystal Structure Of Phospholamban (1-19):pka
C-Subunit:amp-Pnp:mg2+ Complex
Length = 350
Score = 97.1 bits (240), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 64/232 (27%), Positives = 112/232 (48%), Gaps = 8/232 (3%)
Query: 22 GKFASVRKCTHKITKVEYAAKFIRKRRR-SMDQMQDILHEAAVLYLAQKSERIVGLHEIY 80
G F V HK + YA K + K++ + Q++ L+E +L A +V L +
Sbjct: 52 GSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQ-AVNFPFLVKLEFSF 110
Query: 81 ETPHEMVLVLEMVPDGELQRLVDIQDGIPEQDTRSYMKQILEALAFLHDHNITHLDLKPQ 140
+ + +V+E V GE+ + E R Y QI+ +LH ++ + DLKP+
Sbjct: 111 KDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPE 170
Query: 141 NILLTKDNNIKLCDFGISRVVNDVVEVKEIIGTPDYVAPEVLSYEPISLATDMWSVGVLA 200
N+++ + I++ DFG ++ V + GTP+Y+APE++ + + A D W++GVL
Sbjct: 171 NLIIDQQGYIQVTDFGFAKRVKG--RTWXLCGTPEYLAPEIIISKGYNKAVDWWALGVLI 228
Query: 201 YVLLSSHSPFAGDNKQETFLNISQCNFSFHEDLFGHISSQAKDFIQSCLVTD 252
Y + + + PF D + + I F H SS KD +++ L D
Sbjct: 229 YEMAAGYPPFFADQPIQIYEKIVSGKVRFP----SHFSSDLKDLLRNLLQVD 276
>pdb|1SMH|A Chain A, Protein Kinase A Variant Complex With Completely Ordered
N- Terminal Helix
pdb|1XHA|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 96.7 bits (239), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 63/232 (27%), Positives = 112/232 (48%), Gaps = 8/232 (3%)
Query: 22 GKFASVRKCTHKITKVEYAAKFIRKRRR-SMDQMQDILHEAAVLYLAQKSERIVGLHEIY 80
G F V H T YA K + K++ + +++ L+E +L A +V L +
Sbjct: 52 GSFGRVMLVKHMETGNHYAMKILDKQKVVKLKEIEHTLNEKRILQ-AVNFPFLVKLEFSF 110
Query: 81 ETPHEMVLVLEMVPDGELQRLVDIQDGIPEQDTRSYMKQILEALAFLHDHNITHLDLKPQ 140
+ + +V+E P GE+ + E R Y QI+ +LH ++ + DLKP+
Sbjct: 111 KDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPE 170
Query: 141 NILLTKDNNIKLCDFGISRVVNDVVEVKEIIGTPDYVAPEVLSYEPISLATDMWSVGVLA 200
N+++ + I++ DFG+++ V + GTP+Y+APE++ + + A D W++GVL
Sbjct: 171 NLMIDQQGYIQVTDFGLAKRVKG--RTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLI 228
Query: 201 YVLLSSHSPFAGDNKQETFLNISQCNFSFHEDLFGHISSQAKDFIQSCLVTD 252
Y + + + PF D + + I F H SS KD +++ L D
Sbjct: 229 YEMAAGYPPFFADQPIQIYEKIVSGKVRFP----SHFSSDLKDLLRNLLQVD 276
>pdb|1YDT|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H89 Protein
Kinase Inhibitor N-[2-
(4-Bromocinnamylamino)ethyl]-5-Isoquinoline
pdb|1YDR|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H7 Protein
Kinase Inhibitor 1-(5-
Isoquinolinesulfonyl)-2-Methylpiperazine
pdb|1YDS|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H8 Protein
Kinase Inhibitor [n-(2-Methylamino)ethyl]-5-
Isoquinolinesulfonamide
Length = 350
Score = 96.7 bits (239), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 65/232 (28%), Positives = 111/232 (47%), Gaps = 8/232 (3%)
Query: 22 GKFASVRKCTHKITKVEYAAKFIRKRRR-SMDQMQDILHEAAVLYLAQKSERIVGLHEIY 80
G F V H T YA K + K++ + Q++ L+E +L A +V L +
Sbjct: 52 GSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQ-AVNFPFLVKLEFSF 110
Query: 81 ETPHEMVLVLEMVPDGELQRLVDIQDGIPEQDTRSYMKQILEALAFLHDHNITHLDLKPQ 140
+ + +V+E V GE+ + E R Y QI+ +LH ++ + DLKP+
Sbjct: 111 KDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPE 170
Query: 141 NILLTKDNNIKLCDFGISRVVNDVVEVKEIIGTPDYVAPEVLSYEPISLATDMWSVGVLA 200
N+L+ + I++ DFG ++ V + GTP+Y+APE++ + + A D W++GVL
Sbjct: 171 NLLIDQQGYIQVTDFGFAKRVKG--RTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLI 228
Query: 201 YVLLSSHSPFAGDNKQETFLNISQCNFSFHEDLFGHISSQAKDFIQSCLVTD 252
Y + + + PF D + + I F H SS KD +++ L D
Sbjct: 229 YEMAAGYPPFFADQPIQIYEKIVSGKVRFP----SHFSSDLKDLLRNLLQVD 276
>pdb|3QAM|E Chain E, Crystal Structure Of Glu208ala Mutant Of Catalytic Subunit
Of Camp- Dependent Protein Kinase
Length = 350
Score = 95.5 bits (236), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 64/232 (27%), Positives = 111/232 (47%), Gaps = 8/232 (3%)
Query: 22 GKFASVRKCTHKITKVEYAAKFIRKRRR-SMDQMQDILHEAAVLYLAQKSERIVGLHEIY 80
G F V HK + YA K + K++ + Q++ L+E +L A +V L +
Sbjct: 52 GSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQ-AVNFPFLVKLEFSF 110
Query: 81 ETPHEMVLVLEMVPDGELQRLVDIQDGIPEQDTRSYMKQILEALAFLHDHNITHLDLKPQ 140
+ + +V+E V GE+ + E R Y QI+ +LH ++ + DLKP+
Sbjct: 111 KDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPE 170
Query: 141 NILLTKDNNIKLCDFGISRVVNDVVEVKEIIGTPDYVAPEVLSYEPISLATDMWSVGVLA 200
N+L+ + I++ DFG ++ V + GTP+Y+AP ++ + + A D W++GVL
Sbjct: 171 NLLIDQQGYIQVTDFGFAKRVKG--RTWXLCGTPEYLAPAIILSKGYNKAVDWWALGVLI 228
Query: 201 YVLLSSHSPFAGDNKQETFLNISQCNFSFHEDLFGHISSQAKDFIQSCLVTD 252
Y + + + PF D + + I F H SS KD +++ L D
Sbjct: 229 YEMAAGYPPFFADQPIQIYEKIVSGKVRFP----SHFSSDLKDLLRNLLQVD 276
>pdb|3NYN|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYN|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYO|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
pdb|3NYO|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
Length = 576
Score = 95.1 bits (235), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 71/237 (29%), Positives = 112/237 (47%), Gaps = 4/237 (1%)
Query: 20 SRGKFASVRKCTHKITKVEYAAKFIRKRRRSMDQMQDI-LHEAAVLYLAQKSERIVGLHE 78
+G F V C + T YA K + K+R + + + L+E +L S +V L
Sbjct: 193 GKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKQILEKVN-SRFVVSLAY 251
Query: 79 IYETPHEMVLVLEMVPDGELQRLVD--IQDGIPEQDTRSYMKQILEALAFLHDHNITHLD 136
YET + LVL ++ G+L+ + Q G PE Y +I L LH I + D
Sbjct: 252 AYETKDALCLVLTLMNGGDLKFHIYHMGQAGFPEARAVFYAAEICCGLEDLHRERIVYRD 311
Query: 137 LKPQNILLTKDNNIKLCDFGISRVVNDVVEVKEIIGTPDYVAPEVLSYEPISLATDMWSV 196
LKP+NILL +I++ D G++ V + +K +GT Y+APEV+ E + + D W++
Sbjct: 312 LKPENILLDDHGHIRISDLGLAVHVPEGQTIKGRVGTVGYMAPEVVKNERYTFSPDWWAL 371
Query: 197 GVLAYVLLSSHSPFAGDNKQETFLNISQCNFSFHEDLFGHISSQAKDFIQSCLVTDP 253
G L Y +++ SPF K+ + + E+ S QA+ L DP
Sbjct: 372 GCLLYEMIAGQSPFQQRKKKIKREEVERLVKEVPEEYSERFSPQARSLCSQLLCKDP 428
>pdb|2BFX|A Chain A, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2BFX|B Chain B, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2VGP|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGP|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGO|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|2VGO|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|3ZTX|A Chain A, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen.
pdb|3ZTX|B Chain B, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen
Length = 284
Score = 94.7 bits (234), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 62/234 (26%), Positives = 106/234 (45%), Gaps = 5/234 (2%)
Query: 20 SRGKFASVRKCTHKITKVEYAAKFIRKRRRSMDQMQDILHEAAVLYLAQKSERIVGLHEI 79
+GKF +V K K A K + K + + ++ L + + I+ ++
Sbjct: 23 GKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHLRHPNILRMYNY 82
Query: 80 YETPHEMVLVLEMVPDGELQRLVDIQDGIPEQDTRSYMKQILEALAFLHDHNITHLDLKP 139
+ + L+LE P GEL + + EQ + ++M+++ +AL + H+ + H D+KP
Sbjct: 83 FHDRKRIYLMLEFAPRGELYKELQKHGRFDEQRSATFMEELADALHYCHERKVIHRDIKP 142
Query: 140 QNILLTKDNNIKLCDFGISRVVNDVVEVKEIIGTPDYVAPEVLSYEPISLATDMWSVGVL 199
+N+L+ +K+ DFG S V + + + GT DY+ PE++ + D+W GVL
Sbjct: 143 ENLLMGYKGELKIADFGWS-VHAPSLRRRXMCGTLDYLPPEMIEGKTHDEKVDLWCAGVL 201
Query: 200 AYVLLSSHSPFAGDNKQETFLNISQCNFSFHEDLFGHISSQAKDFIQSCLVTDP 253
Y L PF + ET I + F L S +KD I L P
Sbjct: 202 CYEFLVGMPPFDSPSHTETHRRIVNVDLKFPPFL----SDGSKDLISKLLRYHP 251
>pdb|2VRX|A Chain A, Structure Of Aurora B Kinase In Complex With Zm447439
pdb|2VRX|B Chain B, Structure Of Aurora B Kinase In Complex With Zm447439
Length = 285
Score = 94.7 bits (234), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 62/234 (26%), Positives = 106/234 (45%), Gaps = 5/234 (2%)
Query: 20 SRGKFASVRKCTHKITKVEYAAKFIRKRRRSMDQMQDILHEAAVLYLAQKSERIVGLHEI 79
+GKF +V K K A K + K + + ++ L + + I+ ++
Sbjct: 24 GKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHLRHPNILRMYNY 83
Query: 80 YETPHEMVLVLEMVPDGELQRLVDIQDGIPEQDTRSYMKQILEALAFLHDHNITHLDLKP 139
+ + L+LE P GEL + + EQ + ++M+++ +AL + H+ + H D+KP
Sbjct: 84 FHDRKRIYLMLEFAPRGELYKELQKHGRFDEQRSATFMEELADALHYCHERKVIHRDIKP 143
Query: 140 QNILLTKDNNIKLCDFGISRVVNDVVEVKEIIGTPDYVAPEVLSYEPISLATDMWSVGVL 199
+N+L+ +K+ DFG S V + + + GT DY+ PE++ + D+W GVL
Sbjct: 144 ENLLMGYKGELKIADFGWS-VHAPSLRRRXMCGTLDYLPPEMIEGKTHDEKVDLWCAGVL 202
Query: 200 AYVLLSSHSPFAGDNKQETFLNISQCNFSFHEDLFGHISSQAKDFIQSCLVTDP 253
Y L PF + ET I + F L S +KD I L P
Sbjct: 203 CYEFLVGMPPFDSPSHTETHRRIVNVDLKFPPFL----SDGSKDLISKLLRYHP 252
>pdb|2F57|A Chain A, Crystal Structure Of The Human P21-activated Kinase 5
pdb|2F57|B Chain B, Crystal Structure Of The Human P21-activated Kinase 5
Length = 317
Score = 94.7 bits (234), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 63/225 (28%), Positives = 113/225 (50%), Gaps = 6/225 (2%)
Query: 30 CTHKITKVEYAAKFIRKRRRSMDQMQDILHEAAVLYLAQKSERIVGLHEIYETPHEMVLV 89
T K T + A K + R++ Q +++L V+ + +V ++ Y E+ +V
Sbjct: 64 ATEKHTGKQVAVKKMDLRKQ---QRRELLFNEVVIMRDYHHDNVVDMYSSYLVGDELWVV 120
Query: 90 LEMVPDGELQRLVDIQDGIPEQDTRSYMKQILEALAFLHDHNITHLDLKPQNILLTKDNN 149
+E + G L +V + E+ + +L AL++LH+ + H D+K +ILLT D
Sbjct: 121 MEFLEGGALTDIV-THTRMNEEQIATVCLSVLRALSYLHNQGVIHRDIKSDSILLTSDGR 179
Query: 150 IKLCDFGI-SRVVNDVVEVKEIIGTPDYVAPEVLSYEPISLATDMWSVGVLAYVLLSSHS 208
IKL DFG ++V +V + K ++GTP ++APEV+S P D+WS+G++ ++
Sbjct: 180 IKLSDFGFCAQVSKEVPKRKXLVGTPYWMAPEVISRLPYGTEVDIWSLGIMVIEMIDGEP 239
Query: 209 PFAGDNKQETFLNISQCNFSFHEDLFGHISSQAKDFIQSCLVTDP 253
P+ + + I +DL +SS + F+ LV +P
Sbjct: 240 PYFNEPPLQAMRRIRDSLPPRVKDLH-KVSSVLRGFLDLMLVREP 283
>pdb|3UC3|A Chain A, The Crystal Structure Of Snf1-Related Kinase 2.3
Length = 361
Score = 94.7 bits (234), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 70/239 (29%), Positives = 111/239 (46%), Gaps = 13/239 (5%)
Query: 22 GKFASVRKCTHKITKVEYAAKFIRKRRRSMDQMQDILHEAAVLYLAQKSERIVGLHEIYE 81
G F R K+TK A K+I +R ++D+ + + + + + IV E+
Sbjct: 31 GNFGVARLMRDKLTKELVAVKYI-ERGAAIDEN---VQREIINHRSLRHPNIVRFKEVIL 86
Query: 82 TPHEMVLVLEMVPDGELQRLVDIQDGIPEQDTRSYMKQILEALAFLHDHNITHLDLKPQN 141
TP + +++E GEL + E + R + +Q+L +++ H I H DLK +N
Sbjct: 87 TPTHLAIIMEYASGGELYERICNAGRFSEDEARFFFQQLLSGVSYCHSMQICHRDLKLEN 146
Query: 142 ILL--TKDNNIKLCDFGISRVVNDVVEVKEIIGTPDYVAPEV-LSYEPISLATDMWSVGV 198
LL + +K+CDFG S+ + K +GTP Y+APEV L E D+WS GV
Sbjct: 147 TLLDGSPAPRLKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLLRQEYDGKIADVWSCGV 206
Query: 199 LAYVLLSSHSPFAGDNK----QETFLNISQCNFSFHEDLFGHISSQAKDFIQSCLVTDP 253
YV+L PF + ++T I +S +D+ IS + I V DP
Sbjct: 207 TLYVMLVGAYPFEDPEEPRDYRKTIQRILSVKYSIPDDI--RISPECCHLISRIFVADP 263
>pdb|2BFY|A Chain A, Complex Of Aurora-B With Incenp And Hesperidin.
pdb|2BFY|B Chain B, Complex Of Aurora-B With Incenp And Hesperidin
Length = 284
Score = 94.7 bits (234), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 62/234 (26%), Positives = 106/234 (45%), Gaps = 5/234 (2%)
Query: 20 SRGKFASVRKCTHKITKVEYAAKFIRKRRRSMDQMQDILHEAAVLYLAQKSERIVGLHEI 79
+GKF +V K K A K + K + + ++ L + + I+ ++
Sbjct: 23 GKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHLRHPNILRMYNY 82
Query: 80 YETPHEMVLVLEMVPDGELQRLVDIQDGIPEQDTRSYMKQILEALAFLHDHNITHLDLKP 139
+ + L+LE P GEL + + EQ + ++M+++ +AL + H+ + H D+KP
Sbjct: 83 FHDRKRIYLMLEFAPRGELYKELQKHGRFDEQRSATFMEELADALHYCHERKVIHRDIKP 142
Query: 140 QNILLTKDNNIKLCDFGISRVVNDVVEVKEIIGTPDYVAPEVLSYEPISLATDMWSVGVL 199
+N+L+ +K+ DFG S V + + + GT DY+ PE++ + D+W GVL
Sbjct: 143 ENLLMGYKGELKIADFGWS-VHAPSLRRRXMCGTLDYLPPEMIEGKTHDEKVDLWCAGVL 201
Query: 200 AYVLLSSHSPFAGDNKQETFLNISQCNFSFHEDLFGHISSQAKDFIQSCLVTDP 253
Y L PF + ET I + F L S +KD I L P
Sbjct: 202 CYEFLVGMPPFDSPSHTETHRRIVNVDLKFPPFL----SDGSKDLISKLLRYHP 251
>pdb|2ACX|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
pdb|2ACX|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
Length = 576
Score = 94.7 bits (234), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 71/237 (29%), Positives = 112/237 (47%), Gaps = 4/237 (1%)
Query: 20 SRGKFASVRKCTHKITKVEYAAKFIRKRRRSMDQMQDI-LHEAAVLYLAQKSERIVGLHE 78
+G F V C + T YA K + K+R + + + L+E +L S +V L
Sbjct: 193 GKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKQILEKVN-SRFVVSLAY 251
Query: 79 IYETPHEMVLVLEMVPDGELQRLVD--IQDGIPEQDTRSYMKQILEALAFLHDHNITHLD 136
YET + LVL ++ G+L+ + Q G PE Y +I L LH I + D
Sbjct: 252 AYETKDALCLVLTLMNGGDLKFHIYHMGQAGFPEARAVFYAAEICCGLEDLHRERIVYRD 311
Query: 137 LKPQNILLTKDNNIKLCDFGISRVVNDVVEVKEIIGTPDYVAPEVLSYEPISLATDMWSV 196
LKP+NILL +I++ D G++ V + +K +GT Y+APEV+ E + + D W++
Sbjct: 312 LKPENILLDDHGHIRISDLGLAVHVPEGQTIKGRVGTVGYMAPEVVKNERYTFSPDWWAL 371
Query: 197 GVLAYVLLSSHSPFAGDNKQETFLNISQCNFSFHEDLFGHISSQAKDFIQSCLVTDP 253
G L Y +++ SPF K+ + + E+ S QA+ L DP
Sbjct: 372 GCLLYEMIAGQSPFQQRKKKIKREEVERLVKEVPEEYSERFSPQARSLCSQLLCKDP 428
>pdb|1RDQ|E Chain E, Hydrolysis Of Atp In The Crystal Of Y204a Mutant Of
Camp-Dependent Protein Kinase
Length = 350
Score = 94.4 bits (233), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 64/232 (27%), Positives = 111/232 (47%), Gaps = 8/232 (3%)
Query: 22 GKFASVRKCTHKITKVEYAAKFIRKRRR-SMDQMQDILHEAAVLYLAQKSERIVGLHEIY 80
G F V HK + YA K + K++ + Q++ L+E +L A +V L +
Sbjct: 52 GSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQ-AVNFPFLVKLEFSF 110
Query: 81 ETPHEMVLVLEMVPDGELQRLVDIQDGIPEQDTRSYMKQILEALAFLHDHNITHLDLKPQ 140
+ + +V+E V GE+ + E R Y QI+ +LH ++ + DLKP+
Sbjct: 111 KDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPE 170
Query: 141 NILLTKDNNIKLCDFGISRVVNDVVEVKEIIGTPDYVAPEVLSYEPISLATDMWSVGVLA 200
N+L+ + I++ DFG ++ V + GTP+ +APE++ + + A D W++GVL
Sbjct: 171 NLLIDQQGYIQVTDFGFAKRVKG--RTWXLCGTPEALAPEIILSKGYNKAVDWWALGVLI 228
Query: 201 YVLLSSHSPFAGDNKQETFLNISQCNFSFHEDLFGHISSQAKDFIQSCLVTD 252
Y + + + PF D + + I F H SS KD +++ L D
Sbjct: 229 YEMAAGYPPFFADQPIQIYEKIVSGKVRFP----SHFSSDLKDLLRNLLQVD 276
>pdb|4AAA|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain
pdb|4BBM|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
pdb|4BBM|B Chain B, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
Length = 331
Score = 94.0 bits (232), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 66/221 (29%), Positives = 105/221 (47%), Gaps = 8/221 (3%)
Query: 20 SRGKFASVRKCTHKIT-KVEYAAKFIRKRRRSMDQMQDILHEAAVLYLAQKSERIVGLHE 78
G + V KC +K T ++ KF+ M ++ I L + E +V L E
Sbjct: 34 GEGSYGMVMKCRNKDTGRIVAIKKFLESDDDKM--VKKIAMREIKLLKQLRHENLVNLLE 91
Query: 79 IYETPHEMVLVLEMVPDGELQRLVDIQDGIPEQDTRSYMKQILEALAFLHDHNITHLDLK 138
+ + LV E V L L +G+ Q + Y+ QI+ + F H HNI H D+K
Sbjct: 92 VCKKKKRWYLVFEFVDHTILDDLELFPNGLDYQVVQKYLFQIINGIGFCHSHNIIHRDIK 151
Query: 139 PQNILLTKDNNIKLCDFGISRVVNDVVEV-KEIIGTPDYVAPEVLSYE-PISLATDMWSV 196
P+NIL+++ +KLCDFG +R + EV + + T Y APE+L + A D+W++
Sbjct: 152 PENILVSQSGVVKLCDFGFARTLAAPGEVYDDEVATRWYRAPELLVGDVKYGKAVDVWAI 211
Query: 197 GVLAYVLLSSHSPFAGDNKQETFLNISQCNFSF---HEDLF 234
G L + F GD+ + +I C + H++LF
Sbjct: 212 GCLVTEMFMGEPLFPGDSDIDQLYHIMMCLGNLIPRHQELF 252
>pdb|2J51|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To 5-
Amino-3-((4-(Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2,4-Triazole-1-Carbothioamide
Length = 325
Score = 93.6 bits (231), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 71/235 (30%), Positives = 114/235 (48%), Gaps = 11/235 (4%)
Query: 22 GKFASVRKCTHKITKVEYAAKFIRKRRRSMDQMQDILHEAAVLYLAQKSERIVGLHEIYE 81
G F V K +K T V AAK I + S ++++D + E +L IV L + +
Sbjct: 48 GAFGKVYKAQNKETSVLAAAKVIDTK--SEEELEDYMVEIDILASCDHP-NIVKLLDAFY 104
Query: 82 TPHEMVLVLEMVPDGELQR-LVDIQDGIPEQDTRSYMKQILEALAFLHDHNITHLDLKPQ 140
+ + +++E G + +++++ + E + KQ L+AL +LHD+ I H DLK
Sbjct: 105 YENNLWILIEFCAGGAVDAVMLELERPLTESQIQVVCKQTLDALNYLHDNKIIHRDLKAG 164
Query: 141 NILLTKDNNIKLCDFGISRVVNDVVEVKE-IIGTPDYVAPEVLSYE-----PISLATDMW 194
NIL T D +IKL DFG+S ++ ++ IGTP ++APEV+ E P D+W
Sbjct: 165 NILFTLDGDIKLADFGVSAKNTRTIQRRDSFIGTPYWMAPEVVMCETSKDRPYDYKADVW 224
Query: 195 SVGVLAYVLLSSHSPFAGDNKQETFLNISQCNFSFHEDLFGHISSQAKDFIQSCL 249
S+G+ + P N L I++ SS KDF++ CL
Sbjct: 225 SLGITLIEMAEIEPPHHELNPMRVLLKIAKSEPPTLAQP-SRWSSNFKDFLKKCL 278
>pdb|2WQM|A Chain A, Structure Of Apo Human Nek7
pdb|2WQN|A Chain A, Structure Of Adp-Bound Human Nek7
Length = 310
Score = 93.6 bits (231), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 72/267 (26%), Positives = 119/267 (44%), Gaps = 37/267 (13%)
Query: 10 GYQTL----IFCMPSRGKFASVRKCTHKITKVEYAAKFIR-------KRR----RSMDQM 54
GY TL I RG+F+ V + + V A K ++ K R + +D +
Sbjct: 27 GYNTLANFRIEKKIGRGQFSEVYRAACLLDGVPVALKKVQIFDLMDAKARADCIKEIDLL 86
Query: 55 QDILHEAAVLYLAQKSERIVGLHEIYETPHEMVLVLEMVPDGELQRLVD----IQDGIPE 110
+ + H + Y A E +E+ +VLE+ G+L R++ + IPE
Sbjct: 87 KQLNHPNVIKYYASFIED-----------NELNIVLELADAGDLSRMIKHFKKQKRLIPE 135
Query: 111 QDTRSYMKQILEALAFLHDHNITHLDLKPQNILLTKDNNIKLCDFGISRVVND-VVEVKE 169
+ Y Q+ AL +H + H D+KP N+ +T +KL D G+ R +
Sbjct: 136 RTVWKYFVQLCSALEHMHSRRVMHRDIKPANVFITATGVVKLGDLGLGRFFSSKTTAAHS 195
Query: 170 IIGTPDYVAPEVLSYEPISLATDMWSVGVLAYVLLSSHSPFAGD--NKQETFLNISQCNF 227
++GTP Y++PE + + +D+WS+G L Y + + SPF GD N I QC++
Sbjct: 196 LVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPFYGDKMNLYSLCKKIEQCDY 255
Query: 228 -SFHEDLFGHISSQAKDFIQSCLVTDP 253
D H S + + + C+ DP
Sbjct: 256 PPLPSD---HYSEELRQLVNMCINPDP 279
>pdb|2JFL|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (
Diphosphorylated Form) Bound To 5- Amino-3-((4-(
Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2, 4-Triazole-1-Carbothioamide
Length = 325
Score = 93.2 bits (230), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 71/235 (30%), Positives = 114/235 (48%), Gaps = 11/235 (4%)
Query: 22 GKFASVRKCTHKITKVEYAAKFIRKRRRSMDQMQDILHEAAVLYLAQKSERIVGLHEIYE 81
G F V K +K T V AAK I + S ++++D + E +L IV L + +
Sbjct: 48 GAFGKVYKAQNKETSVLAAAKVIDTK--SEEELEDYMVEIDILASCDHP-NIVKLLDAFY 104
Query: 82 TPHEMVLVLEMVPDGELQR-LVDIQDGIPEQDTRSYMKQILEALAFLHDHNITHLDLKPQ 140
+ + +++E G + +++++ + E + KQ L+AL +LHD+ I H DLK
Sbjct: 105 YENNLWILIEFCAGGAVDAVMLELERPLTESQIQVVCKQTLDALNYLHDNKIIHRDLKAG 164
Query: 141 NILLTKDNNIKLCDFGISRVVNDVVEVKE-IIGTPDYVAPEVLSYE-----PISLATDMW 194
NIL T D +IKL DFG+S ++ ++ IGTP ++APEV+ E P D+W
Sbjct: 165 NILFTLDGDIKLADFGVSAKNTRXIQRRDXFIGTPYWMAPEVVMCETSKDRPYDYKADVW 224
Query: 195 SVGVLAYVLLSSHSPFAGDNKQETFLNISQCNFSFHEDLFGHISSQAKDFIQSCL 249
S+G+ + P N L I++ SS KDF++ CL
Sbjct: 225 SLGITLIEMAEIEPPHHELNPMRVLLKIAKSEPPTLAQP-SRWSSNFKDFLKKCL 278
>pdb|2JFM|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (Unliganded
Form)
Length = 325
Score = 93.2 bits (230), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 71/235 (30%), Positives = 114/235 (48%), Gaps = 11/235 (4%)
Query: 22 GKFASVRKCTHKITKVEYAAKFIRKRRRSMDQMQDILHEAAVLYLAQKSERIVGLHEIYE 81
G F V K +K T V AAK I + S ++++D + E +L IV L + +
Sbjct: 48 GAFGKVYKAQNKETSVLAAAKVIDTK--SEEELEDYMVEIDILASCDHP-NIVKLLDAFY 104
Query: 82 TPHEMVLVLEMVPDGELQR-LVDIQDGIPEQDTRSYMKQILEALAFLHDHNITHLDLKPQ 140
+ + +++E G + +++++ + E + KQ L+AL +LHD+ I H DLK
Sbjct: 105 YENNLWILIEFCAGGAVDAVMLELERPLTESQIQVVCKQTLDALNYLHDNKIIHRDLKAG 164
Query: 141 NILLTKDNNIKLCDFGISRVVNDVVEVKE-IIGTPDYVAPEVLSYE-----PISLATDMW 194
NIL T D +IKL DFG+S ++ ++ IGTP ++APEV+ E P D+W
Sbjct: 165 NILFTLDGDIKLADFGVSAKNTRXIQRRDSFIGTPYWMAPEVVMCETSKDRPYDYKADVW 224
Query: 195 SVGVLAYVLLSSHSPFAGDNKQETFLNISQCNFSFHEDLFGHISSQAKDFIQSCL 249
S+G+ + P N L I++ SS KDF++ CL
Sbjct: 225 SLGITLIEMAEIEPPHHELNPMRVLLKIAKSEPPTLAQP-SRWSSNFKDFLKKCL 278
>pdb|2C30|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 6
Length = 321
Score = 92.8 bits (229), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 58/217 (26%), Positives = 114/217 (52%), Gaps = 6/217 (2%)
Query: 38 EYAAKFIRKRRRSMDQMQDILHEAAVLYLAQKSERIVGLHEIYETPHEMVLVLEMVPDGE 97
+ A K + R++ Q +++L V+ + +V +++ Y E+ +++E + G
Sbjct: 72 QVAVKMMDLRKQ---QRRELLFNEVVIMRDYQHFNVVEMYKSYLVGEELWVLMEFLQGGA 128
Query: 98 LQRLVDIQDGIPEQDTRSYMKQILEALAFLHDHNITHLDLKPQNILLTKDNNIKLCDFGI 157
L +V Q + E+ + + +L+ALA+LH + H D+K +ILLT D +KL DFG
Sbjct: 129 LTDIVS-QVRLNEEQIATVCEAVLQALAYLHAQGVIHRDIKSDSILLTLDGRVKLSDFGF 187
Query: 158 -SRVVNDVVEVKEIIGTPDYVAPEVLSYEPISLATDMWSVGVLAYVLLSSHSPFAGDNKQ 216
+++ DV + K ++GTP ++APEV+S + D+WS+G++ ++ P+ D+
Sbjct: 188 CAQISKDVPKRKXLVGTPYWMAPEVISRSLYATEVDIWSLGIMVIEMVDGEPPYFSDSPV 247
Query: 217 ETFLNISQCNFSFHEDLFGHISSQAKDFIQSCLVTDP 253
+ + ++ +S +DF++ LV DP
Sbjct: 248 QAMKRLRDSPPPKLKNSH-KVSPVLRDFLERMLVRDP 283
>pdb|4AW2|A Chain A, Crystal Structure Of Cdc42 Binding Protein Kinase Alpha
(Mrck Alpha)
Length = 437
Score = 92.4 bits (228), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 67/245 (27%), Positives = 115/245 (46%), Gaps = 17/245 (6%)
Query: 20 SRGKFASVRKCTHKITKVEYAAKFIRKRRRSMDQMQDILHEAAVLYLAQKSERIVGLHEI 79
RG F V K +A K + K E + + S+ I LH
Sbjct: 83 GRGAFGEVAVVKLKNADKVFAMKILNKWEMLKRAETACFREERDVLVNGDSKWITTLHYA 142
Query: 80 YETPHEMVLVLEMVPDGELQRLVD-IQDGIPEQDTRSYMKQILEALAFLHDHNITHLDLK 138
++ + + LV++ G+L L+ +D +PE+ R Y+ +++ A+ +H + H D+K
Sbjct: 143 FQDDNNLYLVMDYYVGGDLLTLLSKFEDRLPEEMARFYLAEMVIAIDSVHQLHYVHRDIK 202
Query: 139 PQNILLTKDNNIKLCDFG--ISRVVNDVVEVKEIIGTPDYVAPEVLS--------YEPIS 188
P NIL+ + +I+L DFG + + + V+ +GTPDY++PE+L Y P
Sbjct: 203 PDNILMDMNGHIRLADFGSCLKLMEDGTVQSSVAVGTPDYISPEILQAMEGGKGRYGP-- 260
Query: 189 LATDMWSVGVLAYVLLSSHSPFAGDNKQETFLNI--SQCNFSFHEDLFGHISSQAKDFIQ 246
D WS+GV Y +L +PF ++ ET+ I + F F + +S AKD I+
Sbjct: 261 -ECDWWSLGVCMYEMLYGETPFYAESLVETYGKIMNHKERFQFPTQV-TDVSENAKDLIR 318
Query: 247 SCLVT 251
+ +
Sbjct: 319 RLICS 323
>pdb|2IW8|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
pdb|2IW8|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
Length = 302
Score = 92.4 bits (228), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 67/206 (32%), Positives = 107/206 (51%), Gaps = 8/206 (3%)
Query: 22 GKFASVRKCTHKITKVEYAAKFIRKRRRSMDQMQDILHEAAVLYLAQKSERIVGLHEIYE 81
G + V K +K+T A K IR + + E ++L IV L ++
Sbjct: 17 GTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLK-ELNHPNIVKLLDVIH 75
Query: 82 TPHEMVLVLEMVPDGELQRLVDIQ--DGIPEQDTRSYMKQILEALAFLHDHNITHLDLKP 139
T +++ LV E V D +L++ +D GIP +SY+ Q+L+ LAF H H + H DLKP
Sbjct: 76 TENKLYLVFEHV-DQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDLKP 134
Query: 140 QNILLTKDNNIKLCDFGISRVVNDVVEV--KEIIGTPDYVAPEV-LSYEPISLATDMWSV 196
QN+L+ + IKL DFG++R V E++ T Y APE+ L + S A D+WS+
Sbjct: 135 QNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV-TLWYRAPEILLGCKYYSTAVDIWSL 193
Query: 197 GVLAYVLLSSHSPFAGDNKQETFLNI 222
G + +++ + F GD++ + I
Sbjct: 194 GCIFAEMVTRRALFPGDSEIDQLFRI 219
>pdb|1NXK|A Chain A, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
pdb|1NXK|B Chain B, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
pdb|1NXK|C Chain C, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
pdb|1NXK|D Chain D, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
Length = 400
Score = 92.0 bits (227), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 64/192 (33%), Positives = 97/192 (50%), Gaps = 10/192 (5%)
Query: 72 RIVGLHE-IYETPHEMVLVLEMVPDGEL-QRLVDIQD-GIPEQDTRSYMKQILEALAFLH 128
RIV ++E +Y +++V E + GEL R+ D D E++ K I EA+ +LH
Sbjct: 119 RIVDVYENLYAGRKCLLIVXECLDGGELFSRIQDRGDQAFTEREASEIXKSIGEAIQYLH 178
Query: 129 DHNITHLDLKPQNILLT--KDNNI-KLCDFGISRVVNDVVEVKEIIGTPDYVAPEVLSYE 185
NI H D+KP+N+L T + N I KL DFG ++ + TP YVAPEVL E
Sbjct: 179 SINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTPCYTPYYVAPEVLGPE 238
Query: 186 PISLATDMWSVGVLAYVLLSSHSPFAGDN----KQETFLNISQCNFSFHEDLFGHISSQA 241
+ D WS+GV+ Y+LL + PF ++ I + F + +S +
Sbjct: 239 KYDKSCDXWSLGVIXYILLCGYPPFYSNHGLAISPGXKTRIRXGQYEFPNPEWSEVSEEV 298
Query: 242 KDFIQSCLVTDP 253
K I++ L T+P
Sbjct: 299 KXLIRNLLKTEP 310
>pdb|2UV2|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To
4-(4-(
5-Cyclopropyl-1h-Pyrazol-3-Ylamino)-Quinazolin-2-
Ylamino)- Phenyl)-Acetonitrile
Length = 287
Score = 91.7 bits (226), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 71/236 (30%), Positives = 111/236 (47%), Gaps = 12/236 (5%)
Query: 22 GKFASVRKCTHKITKVEYAAKFIRKRRRSMDQMQDILHEAAVLYLAQKSERIVGLHEIYE 81
G F V K +K T V AAK I + S ++++D + E +L IV L + +
Sbjct: 21 GDFGKVYKAQNKETSVLAAAKVIDTK--SEEELEDYMVEIDILASCDHP-NIVKLLDAFY 77
Query: 82 TPHEMVLVLEMVPDGELQR-LVDIQDGIPEQDTRSYMKQILEALAFLHDHNITHLDLKPQ 140
+ + +++E G + +++++ + E + KQ L+AL +LHD+ I H DLK
Sbjct: 78 YENNLWILIEFCAGGAVDAVMLELERPLTESQIQVVCKQTLDALNYLHDNKIIHRDLKAG 137
Query: 141 NILLTKDNNIKLCDFGIS--RVVNDVVEVKEIIGTPDYVAPEVLSYE-----PISLATDM 193
NIL T D +IKL DFG+S + IGTP ++APEV+ E P D+
Sbjct: 138 NILFTLDGDIKLADFGVSAKNTRTXIQRRDSFIGTPYWMAPEVVMCETSKDRPYDYKADV 197
Query: 194 WSVGVLAYVLLSSHSPFAGDNKQETFLNISQCNFSFHEDLFGHISSQAKDFIQSCL 249
WS+G+ + P N L I++ SS KDF++ CL
Sbjct: 198 WSLGITLIEMAEIEPPHHELNPMRVLLKIAKSEPPTLAQP-SRWSSNFKDFLKKCL 252
>pdb|2VD5|A Chain A, Structure Of Human Myotonic Dystrophy Protein Kinase In
Complex With The Bisindoylmaleide Inhibitor Bim Viii
pdb|2VD5|B Chain B, Structure Of Human Myotonic Dystrophy Protein Kinase In
Complex With The Bisindoylmaleide Inhibitor Bim Viii
Length = 412
Score = 91.7 bits (226), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 69/241 (28%), Positives = 106/241 (43%), Gaps = 11/241 (4%)
Query: 20 SRGKFASVRKCTHKITKVEYAAKFIRKRRRSMDQMQDILHEAAVLYLAQKSERIVGLHEI 79
RG F+ V K T YA K + K E + + I LH
Sbjct: 70 GRGAFSEVAVVKMKQTGQVYAMKIMNKWDMLKRGEVSCFREERDVLVNGDRRWITQLHFA 129
Query: 80 YETPHEMVLVLEMVPDGELQRLVD-IQDGIPEQDTRSYMKQILEALAFLHDHNITHLDLK 138
++ + + LV+E G+L L+ + IP + R Y+ +I+ A+ +H H D+K
Sbjct: 130 FQDENYLYLVMEYYVGGDLLTLLSKFGERIPAEMARFYLAEIVMAIDSVHRLGYVHRDIK 189
Query: 139 PQNILLTKDNNIKLCDFG--ISRVVNDVVEVKEIIGTPDYVAPEVLSYEPISLAT----- 191
P NILL + +I+L DFG + + V +GTPDY++PE+L T
Sbjct: 190 PDNILLDRCGHIRLADFGSCLKLRADGTVRSLVAVGTPDYLSPEILQAVGGGPGTGSYGP 249
Query: 192 --DMWSVGVLAYVLLSSHSPFAGDNKQETFLNISQCNFSFHEDLFGH-ISSQAKDFIQSC 248
D W++GV AY + +PF D+ ET+ I L + +A+DFIQ
Sbjct: 250 ECDWWALGVFAYEMFYGQTPFYADSTAETYGKIVHYKEHLSLPLVDEGVPEEARDFIQRL 309
Query: 249 L 249
L
Sbjct: 310 L 310
>pdb|2BVA|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
pdb|2BVA|B Chain B, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 292
Score = 91.3 bits (225), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 67/255 (26%), Positives = 120/255 (47%), Gaps = 23/255 (9%)
Query: 3 NKFFVNGGYQTLIFCMP---SRGKFASVRKCTHKITKVEYAAKFIRKRRRSMDQMQDILH 59
+ F G T I C+ S GK +V+K +RK++R +++L
Sbjct: 23 DNFIKIGEGSTGIVCIATVRSSGKLVAVKKMD------------LRKQQR-----RELLF 65
Query: 60 EAAVLYLAQKSERIVGLHEIYETPHEMVLVLEMVPDGELQRLVDIQDGIPEQDTRSYMKQ 119
V+ + E +V ++ Y E+ +V+E + G L +V + E+ +
Sbjct: 66 NEVVIMRDYQHENVVEMYNSYLVGDELWVVMEFLEGGALTDIV-THTRMNEEQIAAVCLA 124
Query: 120 ILEALAFLHDHNITHLDLKPQNILLTKDNNIKLCDFGI-SRVVNDVVEVKEIIGTPDYVA 178
+L+AL+ LH + H D+K +ILLT D +KL DFG ++V +V K ++GTP ++A
Sbjct: 125 VLQALSVLHAQGVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRRKXLVGTPYWMA 184
Query: 179 PEVLSYEPISLATDMWSVGVLAYVLLSSHSPFAGDNKQETFLNISQCNFSFHEDLFGHIS 238
PE++S P D+WS+G++ ++ P+ + + + + + N +S
Sbjct: 185 PELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPPLKA-MKMIRDNLPPRLKNLHKVS 243
Query: 239 SQAKDFIQSCLVTDP 253
K F+ LV DP
Sbjct: 244 PSLKGFLDRLLVRDP 258
>pdb|2X4Z|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Pf-03758309
pdb|4APP|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With (S)-N-(5-(3-Benzyl-1-Methylpiperazine-4-
Carbonyl)-6,6-Dimethyl-1,4,5,6-Tetrahydropyrrolo(3,4-C)
Pyrazol-3-Yl)-3-Phenoxybenzamide
Length = 296
Score = 91.3 bits (225), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 67/255 (26%), Positives = 120/255 (47%), Gaps = 23/255 (9%)
Query: 3 NKFFVNGGYQTLIFCMP---SRGKFASVRKCTHKITKVEYAAKFIRKRRRSMDQMQDILH 59
+ F G T I C+ S GK +V+K +RK++R +++L
Sbjct: 27 DNFIKIGEGSTGIVCIATVRSSGKLVAVKKMD------------LRKQQR-----RELLF 69
Query: 60 EAAVLYLAQKSERIVGLHEIYETPHEMVLVLEMVPDGELQRLVDIQDGIPEQDTRSYMKQ 119
V+ + E +V ++ Y E+ +V+E + G L +V + E+ +
Sbjct: 70 NEVVIMRDYQHENVVEMYNSYLVGDELWVVMEFLEGGALTDIV-THTRMNEEQIAAVCLA 128
Query: 120 ILEALAFLHDHNITHLDLKPQNILLTKDNNIKLCDFGI-SRVVNDVVEVKEIIGTPDYVA 178
+L+AL+ LH + H D+K +ILLT D +KL DFG ++V +V K ++GTP ++A
Sbjct: 129 VLQALSVLHAQGVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRRKXLVGTPYWMA 188
Query: 179 PEVLSYEPISLATDMWSVGVLAYVLLSSHSPFAGDNKQETFLNISQCNFSFHEDLFGHIS 238
PE++S P D+WS+G++ ++ P+ + + + + + N +S
Sbjct: 189 PELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPPLKA-MKMIRDNLPPRLKNLHKVS 247
Query: 239 SQAKDFIQSCLVTDP 253
K F+ LV DP
Sbjct: 248 PSLKGFLDRLLVRDP 262
>pdb|2CDZ|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Cgp74514a
pdb|2J0I|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 303
Score = 91.3 bits (225), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 67/255 (26%), Positives = 120/255 (47%), Gaps = 23/255 (9%)
Query: 3 NKFFVNGGYQTLIFCMP---SRGKFASVRKCTHKITKVEYAAKFIRKRRRSMDQMQDILH 59
+ F G T I C+ S GK +V+K +RK++R +++L
Sbjct: 34 DNFIKIGEGSTGIVCIATVRSSGKLVAVKKMD------------LRKQQR-----RELLF 76
Query: 60 EAAVLYLAQKSERIVGLHEIYETPHEMVLVLEMVPDGELQRLVDIQDGIPEQDTRSYMKQ 119
V+ + E +V ++ Y E+ +V+E + G L +V + E+ +
Sbjct: 77 NEVVIMRDYQHENVVEMYNSYLVGDELWVVMEFLEGGALTDIV-THTRMNEEQIAAVCLA 135
Query: 120 ILEALAFLHDHNITHLDLKPQNILLTKDNNIKLCDFGI-SRVVNDVVEVKEIIGTPDYVA 178
+L+AL+ LH + H D+K +ILLT D +KL DFG ++V +V K ++GTP ++A
Sbjct: 136 VLQALSVLHAQGVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRRKXLVGTPYWMA 195
Query: 179 PEVLSYEPISLATDMWSVGVLAYVLLSSHSPFAGDNKQETFLNISQCNFSFHEDLFGHIS 238
PE++S P D+WS+G++ ++ P+ + + + + + N +S
Sbjct: 196 PELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPPLKA-MKMIRDNLPPRLKNLHKVS 254
Query: 239 SQAKDFIQSCLVTDP 253
K F+ LV DP
Sbjct: 255 PSLKGFLDRLLVRDP 269
>pdb|2Q0N|A Chain A, Structure Of Human P21 Activating Kinase 4 (Pak4) In
Complex With A Consensus Peptide
Length = 301
Score = 91.3 bits (225), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 67/255 (26%), Positives = 120/255 (47%), Gaps = 23/255 (9%)
Query: 3 NKFFVNGGYQTLIFCMP---SRGKFASVRKCTHKITKVEYAAKFIRKRRRSMDQMQDILH 59
+ F G T I C+ S GK +V+K +RK++R +++L
Sbjct: 32 DNFIKIGEGSTGIVCIATVRSSGKLVAVKKMD------------LRKQQR-----RELLF 74
Query: 60 EAAVLYLAQKSERIVGLHEIYETPHEMVLVLEMVPDGELQRLVDIQDGIPEQDTRSYMKQ 119
V+ + E +V ++ Y E+ +V+E + G L +V + E+ +
Sbjct: 75 NEVVIMRDYQHENVVEMYNSYLVGDELWVVMEFLEGGALTDIV-THTRMNEEQIAAVCLA 133
Query: 120 ILEALAFLHDHNITHLDLKPQNILLTKDNNIKLCDFGI-SRVVNDVVEVKEIIGTPDYVA 178
+L+AL+ LH + H D+K +ILLT D +KL DFG ++V +V K ++GTP ++A
Sbjct: 134 VLQALSVLHAQGVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRRKXLVGTPYWMA 193
Query: 179 PEVLSYEPISLATDMWSVGVLAYVLLSSHSPFAGDNKQETFLNISQCNFSFHEDLFGHIS 238
PE++S P D+WS+G++ ++ P+ + + + + + N +S
Sbjct: 194 PELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPPLKA-MKMIRDNLPPRLKNLHKVS 252
Query: 239 SQAKDFIQSCLVTDP 253
K F+ LV DP
Sbjct: 253 PSLKGFLDRLLVRDP 267
>pdb|3UJG|A Chain A, Crystal Structure Of Snrk2.6 In Complex With Hab1
Length = 361
Score = 90.9 bits (224), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 64/237 (27%), Positives = 106/237 (44%), Gaps = 9/237 (3%)
Query: 22 GKFASVRKCTHKITKVEYAAKFIRKRRRSMDQMQDILHEAAVLYLAQKSERIVGLHEIYE 81
G F R K + A K+I + +++ + + + + + + IV E+
Sbjct: 29 GNFGVARLMRDKQSNELVAVKYIERG----EKIDENVKREIINHRSLRHPNIVRFKEVIL 84
Query: 82 TPHEMVLVLEMVPDGELQRLVDIQDGIPEQDTRSYMKQILEALAFLHDHNITHLDLKPQN 141
TP + +V+E GEL + E + R + +Q++ +++ H + H DLK +N
Sbjct: 85 TPTHLAIVMEYASGGELFERICNAGRFSEDEARFFFQQLISGVSYCHAMQVCHRDLKLEN 144
Query: 142 ILL--TKDNNIKLCDFGISRVVNDVVEVKEIIGTPDYVAPEV-LSYEPISLATDMWSVGV 198
LL + +K+CDFG S+ + K +GTP Y+APEV L E D+WS GV
Sbjct: 145 TLLDGSPAPRLKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLLKKEYDGKVADVWSCGV 204
Query: 199 LAYVLLSSHSPFAGDNKQETFLNISQ--CNFSFHEDLFGHISSQAKDFIQSCLVTDP 253
YV+L PF + + F N + + HIS + + I V DP
Sbjct: 205 TLYVMLVGAYPFEDPEEPKNFRKTIHRILNVQYAIPDYVHISPECRHLISRIFVADP 261
>pdb|3UC4|A Chain A, The Crystal Structure Of Snf1-Related Kinase 2.6
pdb|3UC4|B Chain B, The Crystal Structure Of Snf1-Related Kinase 2.6
Length = 362
Score = 90.9 bits (224), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 66/238 (27%), Positives = 108/238 (45%), Gaps = 11/238 (4%)
Query: 22 GKFASVRKCTHKITKVEYAAKFI-RKRRRSMDQMQDILHEAAVLYLAQKSERIVGLHEIY 80
G F R K + A K+I R + + + ++I++ ++ + IV E+
Sbjct: 30 GNFGVARLMRDKQSNELVAVKYIERGEKIAANVKREIINHRSL-----RHPNIVRFKEVI 84
Query: 81 ETPHEMVLVLEMVPDGELQRLVDIQDGIPEQDTRSYMKQILEALAFLHDHNITHLDLKPQ 140
TP + +V+E GEL + E + R + +Q++ +++ H + H DLK +
Sbjct: 85 LTPTHLAIVMEYASGGELFERICNAGRFSEDEARFFFQQLISGVSYCHAMQVCHRDLKLE 144
Query: 141 NILL--TKDNNIKLCDFGISRVVNDVVEVKEIIGTPDYVAPEV-LSYEPISLATDMWSVG 197
N LL + +K+CDFG S+ + K +GTP Y+APEV L E D+WS G
Sbjct: 145 NTLLDGSPAPRLKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLLKKEYDGKVADVWSCG 204
Query: 198 VLAYVLLSSHSPFAGDNKQETFLNISQ--CNFSFHEDLFGHISSQAKDFIQSCLVTDP 253
V YV+L PF + + F N + + HIS + + I V DP
Sbjct: 205 VTLYVMLVGAYPFEDPEEPKNFRKTIHRILNVQYAIPDYVHISPECRHLISRIFVADP 262
>pdb|3C4X|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4X|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4Y|A Chain A, Crystal Structure Of Apo Form Of G Protein Coupled
Receptor Kinase 1 At 7.51a
pdb|3C4Y|B Chain B, Crystal Structure Of Apo Form Of G Protein Coupled
Receptor Kinase 1 At 7.51a
pdb|3C4Z|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 1.84a
pdb|3C50|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C50|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C51|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
pdb|3C51|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
Length = 543
Score = 90.9 bits (224), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 71/246 (28%), Positives = 120/246 (48%), Gaps = 7/246 (2%)
Query: 14 LIFCMPSRGKFASVRKCTHKITKVEYAAKFIRKRRRSMDQ-MQDILHEAAVLYLAQKSER 72
L F + RG F V C K T YA K + K+R + Q + E +L S
Sbjct: 188 LDFRVLGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILAKVH-SRF 246
Query: 73 IVGLHEIYETPHEMVLVLEMVPDGELQ-RLVDIQDGIPE-QDTRS--YMKQILEALAFLH 128
IV L +ET ++ LV+ ++ G+++ + ++ + P Q+ R+ Y QI+ L LH
Sbjct: 247 IVSLAYAFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQIVSGLEHLH 306
Query: 129 DHNITHLDLKPQNILLTKDNNIKLCDFGIS-RVVNDVVEVKEIIGTPDYVAPEVLSYEPI 187
NI + DLKP+N+LL D N+++ D G++ + + K GTP ++APE+L E
Sbjct: 307 QRNIIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQTKTKGYAGTPGFMAPELLLGEEY 366
Query: 188 SLATDMWSVGVLAYVLLSSHSPFAGDNKQETFLNISQCNFSFHEDLFGHISSQAKDFIQS 247
+ D +++GV Y ++++ PF ++ + Q S +KDF ++
Sbjct: 367 DFSVDYFALGVTLYEMIAARGPFRARGEKVENKELKQRVLEQAVTYPDKFSPASKDFCEA 426
Query: 248 CLVTDP 253
L DP
Sbjct: 427 LLQKDP 432
>pdb|4FIF|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIF|B Chain B, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIG|A Chain A, Catalytic Domain Of Human Pak4
pdb|4FIG|B Chain B, Catalytic Domain Of Human Pak4
pdb|4FIH|A Chain A, Catalytic Domain Of Human Pak4 With Qkftglprqw Peptide
pdb|4FII|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIJ|A Chain A, Catalytic Domain Of Human Pak4
Length = 346
Score = 90.5 bits (223), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 67/255 (26%), Positives = 120/255 (47%), Gaps = 23/255 (9%)
Query: 3 NKFFVNGGYQTLIFCMP---SRGKFASVRKCTHKITKVEYAAKFIRKRRRSMDQMQDILH 59
+ F G T I C+ S GK +V+K +RK++R +++L
Sbjct: 77 DNFIKIGEGSTGIVCIATVRSSGKLVAVKKMD------------LRKQQR-----RELLF 119
Query: 60 EAAVLYLAQKSERIVGLHEIYETPHEMVLVLEMVPDGELQRLVDIQDGIPEQDTRSYMKQ 119
V+ + E +V ++ Y E+ +V+E + G L +V + E+ +
Sbjct: 120 NEVVIMRDYQHENVVEMYNSYLVGDELWVVMEFLEGGALTDIV-THTRMNEEQIAAVCLA 178
Query: 120 ILEALAFLHDHNITHLDLKPQNILLTKDNNIKLCDFGI-SRVVNDVVEVKEIIGTPDYVA 178
+L+AL+ LH + H D+K +ILLT D +KL DFG ++V +V K ++GTP ++A
Sbjct: 179 VLQALSVLHAQGVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRRKXLVGTPYWMA 238
Query: 179 PEVLSYEPISLATDMWSVGVLAYVLLSSHSPFAGDNKQETFLNISQCNFSFHEDLFGHIS 238
PE++S P D+WS+G++ ++ P+ + + + + + N +S
Sbjct: 239 PELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPPLKA-MKMIRDNLPPRLKNLHKVS 297
Query: 239 SQAKDFIQSCLVTDP 253
K F+ LV DP
Sbjct: 298 PSLKGFLDRLLVRDP 312
>pdb|3T8O|A Chain A, Rhodopsin Kinase (grk1) L166k Mutant At 2.5a Resolution
Length = 543
Score = 90.5 bits (223), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 71/246 (28%), Positives = 120/246 (48%), Gaps = 7/246 (2%)
Query: 14 LIFCMPSRGKFASVRKCTHKITKVEYAAKFIRKRRRSMDQ-MQDILHEAAVLYLAQKSER 72
L F + RG F V C K T YA K + K+R + Q + E +L S
Sbjct: 188 LDFRVLGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILAKVH-SRF 246
Query: 73 IVGLHEIYETPHEMVLVLEMVPDGELQ-RLVDIQDGIPE-QDTRS--YMKQILEALAFLH 128
IV L +ET ++ LV+ ++ G+++ + ++ + P Q+ R+ Y QI+ L LH
Sbjct: 247 IVSLAYAFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQIVSGLEHLH 306
Query: 129 DHNITHLDLKPQNILLTKDNNIKLCDFGIS-RVVNDVVEVKEIIGTPDYVAPEVLSYEPI 187
NI + DLKP+N+LL D N+++ D G++ + + K GTP ++APE+L E
Sbjct: 307 QRNIIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQTKTKGYAGTPGFMAPELLLGEEY 366
Query: 188 SLATDMWSVGVLAYVLLSSHSPFAGDNKQETFLNISQCNFSFHEDLFGHISSQAKDFIQS 247
+ D +++GV Y ++++ PF ++ + Q S +KDF ++
Sbjct: 367 DFSVDYFALGVTLYEMIAARGPFRARGEKVENKELKQRVLEQAVTYPDKFSPASKDFCEA 426
Query: 248 CLVTDP 253
L DP
Sbjct: 427 LLQKDP 432
>pdb|3C4W|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
pdb|3C4W|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
Length = 543
Score = 90.5 bits (223), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 71/246 (28%), Positives = 120/246 (48%), Gaps = 7/246 (2%)
Query: 14 LIFCMPSRGKFASVRKCTHKITKVEYAAKFIRKRRRSMDQ-MQDILHEAAVLYLAQKSER 72
L F + RG F V C K T YA K + K+R + Q + E +L S
Sbjct: 188 LDFRVLGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILAKVH-SRF 246
Query: 73 IVGLHEIYETPHEMVLVLEMVPDGELQ-RLVDIQDGIPE-QDTRS--YMKQILEALAFLH 128
IV L +ET ++ LV+ ++ G+++ + ++ + P Q+ R+ Y QI+ L LH
Sbjct: 247 IVSLAYAFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQIVSGLEHLH 306
Query: 129 DHNITHLDLKPQNILLTKDNNIKLCDFGIS-RVVNDVVEVKEIIGTPDYVAPEVLSYEPI 187
NI + DLKP+N+LL D N+++ D G++ + + K GTP ++APE+L E
Sbjct: 307 QRNIIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQTKTKGYAGTPGFMAPELLLGEEY 366
Query: 188 SLATDMWSVGVLAYVLLSSHSPFAGDNKQETFLNISQCNFSFHEDLFGHISSQAKDFIQS 247
+ D +++GV Y ++++ PF ++ + Q S +KDF ++
Sbjct: 367 DFSVDYFALGVTLYEMIAARGPFRARGEKVENKELKQRVLEQAVTYPDKFSPASKDFCEA 426
Query: 248 CLVTDP 253
L DP
Sbjct: 427 LLQKDP 432
>pdb|3QC9|A Chain A, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|B Chain B, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|C Chain C, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|D Chain D, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
Length = 543
Score = 90.5 bits (223), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 71/246 (28%), Positives = 120/246 (48%), Gaps = 7/246 (2%)
Query: 14 LIFCMPSRGKFASVRKCTHKITKVEYAAKFIRKRRRSMDQ-MQDILHEAAVLYLAQKSER 72
L F + RG F V C K T YA K + K+R + Q + E +L S
Sbjct: 188 LDFRVLGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILAKVH-SRF 246
Query: 73 IVGLHEIYETPHEMVLVLEMVPDGELQ-RLVDIQDGIPE-QDTRS--YMKQILEALAFLH 128
IV L +ET ++ LV+ ++ G+++ + ++ + P Q+ R+ Y QI+ L LH
Sbjct: 247 IVSLAYAFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQIVSGLEHLH 306
Query: 129 DHNITHLDLKPQNILLTKDNNIKLCDFGIS-RVVNDVVEVKEIIGTPDYVAPEVLSYEPI 187
NI + DLKP+N+LL D N+++ D G++ + + K GTP ++APE+L E
Sbjct: 307 QRNIIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQTKTKGYAGTPGFMAPELLLGEEY 366
Query: 188 SLATDMWSVGVLAYVLLSSHSPFAGDNKQETFLNISQCNFSFHEDLFGHISSQAKDFIQS 247
+ D +++GV Y ++++ PF ++ + Q S +KDF ++
Sbjct: 367 DFSVDYFALGVTLYEMIAARGPFRARGEKVENKELKQRVLEQAVTYPDKFSPASKDFCEA 426
Query: 248 CLVTDP 253
L DP
Sbjct: 427 LLQKDP 432
>pdb|4ERW|A Chain A, Cdk2 In Complex With Staurosporine
Length = 306
Score = 89.7 bits (221), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 65/206 (31%), Positives = 106/206 (51%), Gaps = 8/206 (3%)
Query: 22 GKFASVRKCTHKITKVEYAAKFIRKRRRSMDQMQDILHEAAVLYLAQKSERIVGLHEIYE 81
G + V K +K+T A K IR + + E ++L IV L ++
Sbjct: 21 GTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLK-ELNHPNIVKLLDVIH 79
Query: 82 TPHEMVLVLEMVPDGELQRLVDIQ--DGIPEQDTRSYMKQILEALAFLHDHNITHLDLKP 139
T +++ LV E + +L++ +D GIP +SY+ Q+L+ LAF H H + H DLKP
Sbjct: 80 TENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDLKP 138
Query: 140 QNILLTKDNNIKLCDFGISRVVNDVVE--VKEIIGTPDYVAPEV-LSYEPISLATDMWSV 196
QN+L+ + IKL DFG++R V E++ T Y APE+ L + S A D+WS+
Sbjct: 139 QNLLINTEGAIKLADFGLARAFGVPVRTYTHEVV-TLWYRAPEILLGXKYYSTAVDIWSL 197
Query: 197 GVLAYVLLSSHSPFAGDNKQETFLNI 222
G + +++ + F GD++ + I
Sbjct: 198 GCIFAEMVTRRALFPGDSEIDQLFRI 223
>pdb|4FIE|A Chain A, Full-Length Human Pak4
pdb|4FIE|B Chain B, Full-Length Human Pak4
Length = 423
Score = 89.7 bits (221), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 67/255 (26%), Positives = 120/255 (47%), Gaps = 23/255 (9%)
Query: 3 NKFFVNGGYQTLIFCMP---SRGKFASVRKCTHKITKVEYAAKFIRKRRRSMDQMQDILH 59
+ F G T I C+ S GK +V+K +RK++R +++L
Sbjct: 154 DNFIKIGEGSTGIVCIATVRSSGKLVAVKKMD------------LRKQQR-----RELLF 196
Query: 60 EAAVLYLAQKSERIVGLHEIYETPHEMVLVLEMVPDGELQRLVDIQDGIPEQDTRSYMKQ 119
V+ + E +V ++ Y E+ +V+E + G L +V + E+ +
Sbjct: 197 NEVVIMRDYQHENVVEMYNSYLVGDELWVVMEFLEGGALTDIV-THTRMNEEQIAAVCLA 255
Query: 120 ILEALAFLHDHNITHLDLKPQNILLTKDNNIKLCDFGI-SRVVNDVVEVKEIIGTPDYVA 178
+L+AL+ LH + H D+K +ILLT D +KL DFG ++V +V K ++GTP ++A
Sbjct: 256 VLQALSVLHAQGVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRRKXLVGTPYWMA 315
Query: 179 PEVLSYEPISLATDMWSVGVLAYVLLSSHSPFAGDNKQETFLNISQCNFSFHEDLFGHIS 238
PE++S P D+WS+G++ ++ P+ + + + + + N +S
Sbjct: 316 PELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPPLKA-MKMIRDNLPPRLKNLHKVS 374
Query: 239 SQAKDFIQSCLVTDP 253
K F+ LV DP
Sbjct: 375 PSLKGFLDRLLVRDP 389
>pdb|2JGZ|A Chain A, Crystal Structure Of Phospho-Cdk2 In Complex With Cyclin B
Length = 289
Score = 89.4 bits (220), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 65/206 (31%), Positives = 106/206 (51%), Gaps = 8/206 (3%)
Query: 22 GKFASVRKCTHKITKVEYAAKFIRKRRRSMDQMQDILHEAAVLYLAQKSERIVGLHEIYE 81
G + V K +K+T A K IR + + E ++L IV L ++
Sbjct: 14 GTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLK-ELNHPNIVKLLDVIH 72
Query: 82 TPHEMVLVLEMVPDGELQRLVDIQ--DGIPEQDTRSYMKQILEALAFLHDHNITHLDLKP 139
T +++ LV E + +L++ +D GIP +SY+ Q+L+ LAF H H + H DLKP
Sbjct: 73 TENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDLKP 131
Query: 140 QNILLTKDNNIKLCDFGISRVVNDVVEV--KEIIGTPDYVAPEV-LSYEPISLATDMWSV 196
QN+L+ + IKL DFG++R V E++ T Y APE+ L + S A D+WS+
Sbjct: 132 QNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV-TLWYRAPEILLGCKYYSTAVDIWSL 190
Query: 197 GVLAYVLLSSHSPFAGDNKQETFLNI 222
G + +++ + F GD++ + I
Sbjct: 191 GCIFAEMVTRRALFPGDSEIDQLFRI 216
>pdb|1GZ8|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 2-Amino-6-(3'-Methyl-2'-Oxo)butoxypurine
pdb|2R3Q|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3M|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3I|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3N|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3O|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3P|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3K|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3J|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3L|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|1W8C|A Chain A, Co-crystal Structure Of
6-cyclohexylmethoxy-8-isopropyl-9h- Purin-2-ylamine And
Monomeric Cdk2
Length = 299
Score = 89.4 bits (220), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 65/206 (31%), Positives = 106/206 (51%), Gaps = 8/206 (3%)
Query: 22 GKFASVRKCTHKITKVEYAAKFIRKRRRSMDQMQDILHEAAVLYLAQKSERIVGLHEIYE 81
G + V K +K+T A K IR + + E ++L IV L ++
Sbjct: 14 GTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLK-ELNHPNIVKLLDVIH 72
Query: 82 TPHEMVLVLEMVPDGELQRLVDIQ--DGIPEQDTRSYMKQILEALAFLHDHNITHLDLKP 139
T +++ LV E + +L++ +D GIP +SY+ Q+L+ LAF H H + H DLKP
Sbjct: 73 TENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDLKP 131
Query: 140 QNILLTKDNNIKLCDFGISRVVNDVVE--VKEIIGTPDYVAPEV-LSYEPISLATDMWSV 196
QN+L+ + IKL DFG++R V E++ T Y APE+ L + S A D+WS+
Sbjct: 132 QNLLINTEGAIKLADFGLARAFGVPVRTYTHEVV-TLWYRAPEILLGXKYYSTAVDIWSL 190
Query: 197 GVLAYVLLSSHSPFAGDNKQETFLNI 222
G + +++ + F GD++ + I
Sbjct: 191 GCIFAEMVTRRALFPGDSEIDQLFRI 216
>pdb|3QHR|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHR|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
Length = 298
Score = 89.4 bits (220), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 65/208 (31%), Positives = 106/208 (50%), Gaps = 8/208 (3%)
Query: 20 SRGKFASVRKCTHKITKVEYAAKFIRKRRRSMDQMQDILHEAAVLYLAQKSERIVGLHEI 79
G + V K +K+T A K IR + + E ++L IV L ++
Sbjct: 13 GEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLK-ELNHPNIVKLLDV 71
Query: 80 YETPHEMVLVLEMVPDGELQRLVDIQ--DGIPEQDTRSYMKQILEALAFLHDHNITHLDL 137
T +++ LV E + +L++ +D GIP +SY+ Q+L+ LAF H H + H DL
Sbjct: 72 IHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDL 130
Query: 138 KPQNILLTKDNNIKLCDFGISRVVNDVVEV--KEIIGTPDYVAPEV-LSYEPISLATDMW 194
KPQN+L+ + IKL DFG++R V E++ T Y APE+ L + S A D+W
Sbjct: 131 KPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV-TLWYRAPEILLGCKYYSTAVDIW 189
Query: 195 SVGVLAYVLLSSHSPFAGDNKQETFLNI 222
S+G + +++ + F GD++ + I
Sbjct: 190 SLGCIFAEMVTRRALFPGDSEIDQLFRI 217
>pdb|1E9H|A Chain A, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1E9H|C Chain C, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1PKD|A Chain A, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
pdb|1PKD|C Chain C, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
Length = 297
Score = 89.4 bits (220), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 65/206 (31%), Positives = 106/206 (51%), Gaps = 8/206 (3%)
Query: 22 GKFASVRKCTHKITKVEYAAKFIRKRRRSMDQMQDILHEAAVLYLAQKSERIVGLHEIYE 81
G + V K +K+T A K IR + + E ++L IV L ++
Sbjct: 14 GTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLK-ELNHPNIVKLLDVIH 72
Query: 82 TPHEMVLVLEMVPDGELQRLVDIQ--DGIPEQDTRSYMKQILEALAFLHDHNITHLDLKP 139
T +++ LV E + +L++ +D GIP +SY+ Q+L+ LAF H H + H DLKP
Sbjct: 73 TENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDLKP 131
Query: 140 QNILLTKDNNIKLCDFGISRVVNDVVEV--KEIIGTPDYVAPEV-LSYEPISLATDMWSV 196
QN+L+ + IKL DFG++R V E++ T Y APE+ L + S A D+WS+
Sbjct: 132 QNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV-TLWYRAPEILLGCKYYSTAVDIWSL 190
Query: 197 GVLAYVLLSSHSPFAGDNKQETFLNI 222
G + +++ + F GD++ + I
Sbjct: 191 GCIFAEMVTRRALFPGDSEIDQLFRI 216
>pdb|3PXF|A Chain A, Cdk2 In Complex With Two Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXQ|A Chain A, Cdk2 In Complex With 3 Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXR|A Chain A, Apo Cdk2 Crystallized From Jeffamine
pdb|3PXY|A Chain A, Cdk2 In Complex With Inhibitor Jws648
pdb|3PXZ|A Chain A, Cdk2 Ternary Complex With Jws648 And Ans
pdb|3PY0|A Chain A, Cdk2 In Complex With Inhibitor Su9516
pdb|3PY1|A Chain A, Cdk2 Ternary Complex With Su9516 And Ans
pdb|3QL8|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-260
pdb|3QQF|A Chain A, Cdk2 In Complex With Inhibitor L1
pdb|3QQG|A Chain A, Cdk2 In Complex With Inhibitor L2-5
pdb|3QQH|A Chain A, Cdk2 In Complex With Inhibitor L2-2
pdb|3QQJ|A Chain A, Cdk2 In Complex With Inhibitor L2
pdb|3QQL|A Chain A, Cdk2 In Complex With Inhibitor L3
pdb|3QRT|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc2-55
pdb|3QRU|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-12
pdb|3QWJ|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-142
pdb|3QWK|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-150
pdb|3QX2|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-190
pdb|3QX4|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-78
pdb|3QXO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-84
pdb|3QZF|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-52
pdb|3QZG|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-76
pdb|3QZH|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-124
pdb|3QZI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-126
pdb|3R1Q|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-102
pdb|3R1S|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-127
pdb|3R1Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-134
pdb|3R28|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-140
pdb|3R6X|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-158
pdb|3R71|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-162
pdb|3R73|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-164
pdb|3R7E|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-67
pdb|3R7I|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-74
pdb|3R7U|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-75
pdb|3R7V|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-9
pdb|3R7Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-88
pdb|3R83|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-92
pdb|3R8L|A Chain A, Cdk2 In Complex With Inhibitor L3-4
pdb|3R8M|A Chain A, Cdk2 In Complex With Inhibitor L3-3
pdb|3R8P|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-6
pdb|3RAI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-160
pdb|3RM6|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-80
pdb|3RM7|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-91
pdb|3ROY|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-154
pdb|3RPO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-156
pdb|4EZ3|A Chain A, Cdk2 In Complex With Nsc 134199
pdb|4EZ7|A Chain A, Cdk2 In Complex With Staurosporine And 2 Molecules Of
8-Anilino-1- Naphthalene Sulfonic Acid
pdb|3QQK|A Chain A, Cdk2 In Complex With Inhibitor L4
pdb|3QTQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-137
pdb|3QTR|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-148
pdb|3QTS|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-12
pdb|3QTU|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-132
pdb|3QTW|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-13
pdb|3QTX|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-35
pdb|3QTZ|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-36
pdb|3QU0|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-38
pdb|3QXP|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
pdb|3R8U|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-132
pdb|3R8V|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-135
pdb|3R8Z|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-136
pdb|3R9D|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-135
pdb|3R9H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-142
pdb|3R9N|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-21
pdb|3R9O|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-143
pdb|3RAH|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-22
pdb|3RAK|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-32
pdb|3RAL|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-34
pdb|3RJC|A Chain A, Cdk2 In Complex With Inhibitor L4-12
pdb|3RK5|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-72
pdb|3RK7|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-71
pdb|3RK9|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-74
pdb|3RKB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-73
pdb|3RMF|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-33
pdb|3RNI|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-86
pdb|3RPR|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-49
pdb|3RPV|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-88
pdb|3RPY|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-40
pdb|3RZB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-23
pdb|3S00|A Chain A, Cdk2 In Complex With Inhibitor L4-14
pdb|3S0O|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-138
pdb|3S1H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-39
pdb|3SQQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-96
pdb|4GCJ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
Length = 306
Score = 89.4 bits (220), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 65/206 (31%), Positives = 106/206 (51%), Gaps = 8/206 (3%)
Query: 22 GKFASVRKCTHKITKVEYAAKFIRKRRRSMDQMQDILHEAAVLYLAQKSERIVGLHEIYE 81
G + V K +K+T A K IR + + E ++L IV L ++
Sbjct: 21 GTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLK-ELNHPNIVKLLDVIH 79
Query: 82 TPHEMVLVLEMVPDGELQRLVDIQ--DGIPEQDTRSYMKQILEALAFLHDHNITHLDLKP 139
T +++ LV E + +L++ +D GIP +SY+ Q+L+ LAF H H + H DLKP
Sbjct: 80 TENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDLKP 138
Query: 140 QNILLTKDNNIKLCDFGISRVVNDVVE--VKEIIGTPDYVAPEV-LSYEPISLATDMWSV 196
QN+L+ + IKL DFG++R V E++ T Y APE+ L + S A D+WS+
Sbjct: 139 QNLLINTEGAIKLADFGLARAFGVPVRTYTHEVV-TLWYRAPEILLGCKYYSTAVDIWSL 197
Query: 197 GVLAYVLLSSHSPFAGDNKQETFLNI 222
G + +++ + F GD++ + I
Sbjct: 198 GCIFAEMVTRRALFPGDSEIDQLFRI 223
>pdb|1H1P|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1P|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1Q|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1Q|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1R|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1R|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1S|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H1S|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H24|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H24|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H25|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H25|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H26|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H26|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H27|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H27|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H28|A Chain A, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|1H28|C Chain C, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|2WMA|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMA|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
Length = 303
Score = 89.4 bits (220), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 65/206 (31%), Positives = 106/206 (51%), Gaps = 8/206 (3%)
Query: 22 GKFASVRKCTHKITKVEYAAKFIRKRRRSMDQMQDILHEAAVLYLAQKSERIVGLHEIYE 81
G + V K +K+T A K IR + + E ++L IV L ++
Sbjct: 18 GTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLK-ELNHPNIVKLLDVIH 76
Query: 82 TPHEMVLVLEMVPDGELQRLVDIQ--DGIPEQDTRSYMKQILEALAFLHDHNITHLDLKP 139
T +++ LV E + +L++ +D GIP +SY+ Q+L+ LAF H H + H DLKP
Sbjct: 77 TENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDLKP 135
Query: 140 QNILLTKDNNIKLCDFGISRVVNDVVEV--KEIIGTPDYVAPEV-LSYEPISLATDMWSV 196
QN+L+ + IKL DFG++R V E++ T Y APE+ L + S A D+WS+
Sbjct: 136 QNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV-TLWYRAPEILLGCKYYSTAVDIWSL 194
Query: 197 GVLAYVLLSSHSPFAGDNKQETFLNI 222
G + +++ + F GD++ + I
Sbjct: 195 GCIFAEMVTRRALFPGDSEIDQLFRI 220
>pdb|1OGU|A Chain A, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OGU|C Chain C, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OI9|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OI9|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
Length = 302
Score = 89.4 bits (220), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 65/206 (31%), Positives = 106/206 (51%), Gaps = 8/206 (3%)
Query: 22 GKFASVRKCTHKITKVEYAAKFIRKRRRSMDQMQDILHEAAVLYLAQKSERIVGLHEIYE 81
G + V K +K+T A K IR + + E ++L IV L ++
Sbjct: 17 GTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLK-ELNHPNIVKLLDVIH 75
Query: 82 TPHEMVLVLEMVPDGELQRLVDIQ--DGIPEQDTRSYMKQILEALAFLHDHNITHLDLKP 139
T +++ LV E + +L++ +D GIP +SY+ Q+L+ LAF H H + H DLKP
Sbjct: 76 TENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDLKP 134
Query: 140 QNILLTKDNNIKLCDFGISRVVNDVVEV--KEIIGTPDYVAPEV-LSYEPISLATDMWSV 196
QN+L+ + IKL DFG++R V E++ T Y APE+ L + S A D+WS+
Sbjct: 135 QNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV-TLWYRAPEILLGCKYYSTAVDIWSL 193
Query: 197 GVLAYVLLSSHSPFAGDNKQETFLNI 222
G + +++ + F GD++ + I
Sbjct: 194 GCIFAEMVTRRALFPGDSEIDQLFRI 219
>pdb|4I3Z|A Chain A, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
pdb|4I3Z|C Chain C, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
Length = 296
Score = 89.4 bits (220), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 65/206 (31%), Positives = 106/206 (51%), Gaps = 8/206 (3%)
Query: 22 GKFASVRKCTHKITKVEYAAKFIRKRRRSMDQMQDILHEAAVLYLAQKSERIVGLHEIYE 81
G + V K +K+T A K IR + + E ++L IV L ++
Sbjct: 13 GTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLK-ELNHPNIVKLLDVIH 71
Query: 82 TPHEMVLVLEMVPDGELQRLVDIQ--DGIPEQDTRSYMKQILEALAFLHDHNITHLDLKP 139
T +++ LV E + +L++ +D GIP +SY+ Q+L+ LAF H H + H DLKP
Sbjct: 72 TENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDLKP 130
Query: 140 QNILLTKDNNIKLCDFGISRVVNDVVEV--KEIIGTPDYVAPEV-LSYEPISLATDMWSV 196
QN+L+ + IKL DFG++R V E++ T Y APE+ L + S A D+WS+
Sbjct: 131 QNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV-TLWYRAPEILLGCKYYSTAVDIWSL 189
Query: 197 GVLAYVLLSSHSPFAGDNKQETFLNI 222
G + +++ + F GD++ + I
Sbjct: 190 GCIFAEMVTRRALFPGDSEIDQLFRI 215
>pdb|1W98|A Chain A, The Structural Basis Of Cdk2 Activation By Cyclin E
pdb|4EOR|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
pdb|4EOR|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
Length = 298
Score = 89.4 bits (220), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 65/206 (31%), Positives = 106/206 (51%), Gaps = 8/206 (3%)
Query: 22 GKFASVRKCTHKITKVEYAAKFIRKRRRSMDQMQDILHEAAVLYLAQKSERIVGLHEIYE 81
G + V K +K+T A K IR + + E ++L IV L ++
Sbjct: 14 GTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLK-ELNHPNIVKLLDVIH 72
Query: 82 TPHEMVLVLEMVPDGELQRLVDIQ--DGIPEQDTRSYMKQILEALAFLHDHNITHLDLKP 139
T +++ LV E + +L++ +D GIP +SY+ Q+L+ LAF H H + H DLKP
Sbjct: 73 TENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDLKP 131
Query: 140 QNILLTKDNNIKLCDFGISRVVNDVVEV--KEIIGTPDYVAPEV-LSYEPISLATDMWSV 196
QN+L+ + IKL DFG++R V E++ T Y APE+ L + S A D+WS+
Sbjct: 132 QNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV-TLWYRAPEILLGCKYYSTAVDIWSL 190
Query: 197 GVLAYVLLSSHSPFAGDNKQETFLNI 222
G + +++ + F GD++ + I
Sbjct: 191 GCIFAEMVTRRALFPGDSEIDQLFRI 216
>pdb|1PF8|A Chain A, Crystal Structure Of Human Cyclin-dependent Kinase 2
Complexed With A Nucleoside Inhibitor
Length = 298
Score = 89.4 bits (220), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 65/206 (31%), Positives = 106/206 (51%), Gaps = 8/206 (3%)
Query: 22 GKFASVRKCTHKITKVEYAAKFIRKRRRSMDQMQDILHEAAVLYLAQKSERIVGLHEIYE 81
G + V K +K+T A K IR + + E ++L IV L ++
Sbjct: 13 GTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLK-ELNHPNIVKLLDVIH 71
Query: 82 TPHEMVLVLEMVPDGELQRLVDIQ--DGIPEQDTRSYMKQILEALAFLHDHNITHLDLKP 139
T +++ LV E + +L++ +D GIP +SY+ Q+L+ LAF H H + H DLKP
Sbjct: 72 TENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDLKP 130
Query: 140 QNILLTKDNNIKLCDFGISRVVNDVVE--VKEIIGTPDYVAPEV-LSYEPISLATDMWSV 196
QN+L+ + IKL DFG++R V E++ T Y APE+ L + S A D+WS+
Sbjct: 131 QNLLINTEGAIKLADFGLARAFGVPVRTYTHEVV-TLWYRAPEILLGCKYYSTAVDIWSL 189
Query: 197 GVLAYVLLSSHSPFAGDNKQETFLNI 222
G + +++ + F GD++ + I
Sbjct: 190 GCIFAEMVTRRALFPGDSEIDQLFRI 215
>pdb|3BHT|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHT|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHU|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHU|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHV|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3BHV|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3MY5|A Chain A, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3MY5|C Chain C, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3TNW|A Chain A, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|3TNW|C Chain C, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|4BCO|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCO|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 300
Score = 89.4 bits (220), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 65/206 (31%), Positives = 106/206 (51%), Gaps = 8/206 (3%)
Query: 22 GKFASVRKCTHKITKVEYAAKFIRKRRRSMDQMQDILHEAAVLYLAQKSERIVGLHEIYE 81
G + V K +K+T A K IR + + E ++L IV L ++
Sbjct: 15 GTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLK-ELNHPNIVKLLDVIH 73
Query: 82 TPHEMVLVLEMVPDGELQRLVDIQ--DGIPEQDTRSYMKQILEALAFLHDHNITHLDLKP 139
T +++ LV E + +L++ +D GIP +SY+ Q+L+ LAF H H + H DLKP
Sbjct: 74 TENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDLKP 132
Query: 140 QNILLTKDNNIKLCDFGISRVVNDVVEV--KEIIGTPDYVAPEV-LSYEPISLATDMWSV 196
QN+L+ + IKL DFG++R V E++ T Y APE+ L + S A D+WS+
Sbjct: 133 QNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV-TLWYRAPEILLGCKYYSTAVDIWSL 191
Query: 197 GVLAYVLLSSHSPFAGDNKQETFLNI 222
G + +++ + F GD++ + I
Sbjct: 192 GCIFAEMVTRRALFPGDSEIDQLFRI 217
>pdb|2W17|A Chain A, Cdk2 In Complex With The Imidazole Pyrimidine Amide,
Compound (S)-8b
pdb|3IG7|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efp With Cdk-2
pdb|3IGG|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efq With Cdk-2
pdb|1B38|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1B39|A Chain A, Human Cyclin-Dependent Kinase 2 Phosphorylated On Thr 160
pdb|1E1V|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu2058
pdb|1E1X|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu6027
pdb|1H00|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H07|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H08|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|2R3R|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|4ACM|A Chain A, Cdk2 In Complex With
3-Amino-6-(4-{[2-(Dimethylamino)ethyl]
Sulfamoyl}-Phenyl)-N-Pyridin-3-Ylpyrazine-2-Carboxamide
pdb|3SW4|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|3SW7|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|1OIQ|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
pdb|1V1K|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1URW|A Chain A, Cdk2 In Complex With An Imidazo[1,2-B]pyridazine
pdb|2VV9|A Chain A, Cdk2 In Complex With An Imidazole Piperazine
pdb|2W06|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5c
pdb|2R3G|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3H|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3F|A Chain A, Crystal Structure Of Cyclin-dependent Kinase 2 With
Inhibitor
Length = 299
Score = 89.4 bits (220), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 65/206 (31%), Positives = 106/206 (51%), Gaps = 8/206 (3%)
Query: 22 GKFASVRKCTHKITKVEYAAKFIRKRRRSMDQMQDILHEAAVLYLAQKSERIVGLHEIYE 81
G + V K +K+T A K IR + + E ++L IV L ++
Sbjct: 14 GTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLK-ELNHPNIVKLLDVIH 72
Query: 82 TPHEMVLVLEMVPDGELQRLVDIQ--DGIPEQDTRSYMKQILEALAFLHDHNITHLDLKP 139
T +++ LV E + +L++ +D GIP +SY+ Q+L+ LAF H H + H DLKP
Sbjct: 73 TENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDLKP 131
Query: 140 QNILLTKDNNIKLCDFGISRVVNDVVE--VKEIIGTPDYVAPEV-LSYEPISLATDMWSV 196
QN+L+ + IKL DFG++R V E++ T Y APE+ L + S A D+WS+
Sbjct: 132 QNLLINTEGAIKLADFGLARAFGVPVRTYTHEVV-TLWYRAPEILLGCKYYSTAVDIWSL 190
Query: 197 GVLAYVLLSSHSPFAGDNKQETFLNI 222
G + +++ + F GD++ + I
Sbjct: 191 GCIFAEMVTRRALFPGDSEIDQLFRI 216
>pdb|1FIN|A Chain A, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1FIN|C Chain C, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1CKP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Purvalanol B
pdb|1BUH|A Chain A, Crystal Structure Of The Human Cdk2 Kinase Complex With
Cell Cycle-Regulatory Protein Ckshs1
pdb|1DM2|A Chain A, Human Cyclin-Dependent Kinase 2 Complexed With The
Inhibitor Hymenialdisine
pdb|1DI8|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With
4-[3-Hydroxyanilino]-6,7-Dimethoxyquinazoline
pdb|1F5Q|A Chain A, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1F5Q|C Chain C, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1FVT|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With An Oxindole Inhibitor
pdb|1FVV|A Chain A, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1FVV|C Chain C, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1JSV|A Chain A, The Structure Of Cyclin-dependent Kinase 2 (cdk2) In
Complex With 4-[(6-amino-4-pyrimidinyl)
Amino]benzenesulfonamide
pdb|1G5S|A Chain A, Crystal Structure Of Human Cyclin Dependent Kinase 2
(Cdk2) In Complex With The Inhibitor H717
pdb|1JVP|P Chain P, Crystal Structure Of Human Cdk2 (Unphosphorylated) In
Complex With Pkf049-365
pdb|1GIH|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1KE5|A Chain A, Cdk2 Complexed With N-methyl-4-{[(2-oxo-1,2-dihydro-3h-
Indol-3-ylidene)methyl]amino}benzenesulfonamide
pdb|1KE6|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
N-Methyl-{4-
[2-(7-Oxo-6,7-Dihydro-8h-[1,3]thiazolo[5,4-E]indol-8-
Ylidene)hydrazino]phenyl}methanesulfonamide
pdb|1KE7|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[(2,2-
Dioxido-1,
3-Dihydro-2-Benzothien-5-Yl)amino]methylene}-5-
(1,3-Oxazol-5-Yl)-1,3-Dihydro-2h-Indol-2-One
pdb|1KE8|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
4-{[(2-Oxo-
1,2-Dihydro-3h-Indol-3-Ylidene)methyl]amino}-N-(1,3-
Thiazol-2-Yl)benzenesulfonamide
pdb|1KE9|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[4-
({[amino(Imino)methyl]aminosulfonyl)anilino]methylene}-
2- Oxo-2,3-Dihydro-1h-Indole
pdb|1H0V|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor
2-Amino-6-[(R)-Pyrrolidino-5'-Yl]methoxypurine
pdb|1H0W|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 2-Amino-6-[cyclohex-3-Enyl]methoxypurine
pdb|1P2A|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Trisubstituted Naphthostyril Inhibitor
pdb|1OKV|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKV|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKW|A Chain A, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OKW|C Chain C, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OL1|A Chain A, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL1|C Chain C, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL2|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1OL2|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1PW2|A Chain A, Apo Structure Of Human Cyclin-Dependent Kinase 2
pdb|1PXI|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-(2,5-dichloro-thiophen-3-yl)-pyrimidin-2-
Ylamine
pdb|1PXJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Ylamine
pdb|1PXK|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-dimethyl-thiazol-5-yl)pyrimidin-2-yl]-
N'-hydroxyiminoformamide
pdb|1PXL|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2,4-dimethyl-thiazol-5-yl)-pyrimidin-2-yl]-
(4-trifluoromethyl-phenyl)-amine
pdb|1R78|A Chain A, Cdk2 Complex With A 4-alkynyl Oxindole Inhibitor
pdb|1PXM|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 3-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-
Ylamino]-Phenol
pdb|1PXN|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-[4-(4-Methyl-2-Methylamino-Thiazol-5-Yl)-
Pyrimidin-2-Ylamino]-Phenol
pdb|1PXO|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2-Amino-4-Methyl-Thiazol-5-Yl)-Pyrimidin-2-
Yl]-(3-Nitro-Phenyl)-Amine
pdb|1PXP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Yl]-
N',N'-Dimethyl-Benzene-1,4-Diamine
pdb|1VYZ|A Chain A, Structure Of Cdk2 Complexed With Pnu-181227
pdb|1PYE|A Chain A, Crystal Structure Of Cdk2 With Inhibitor
pdb|1URC|A Chain A, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1URC|C Chain C, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1W0X|C Chain C, Crystals Structure Of Human Cdk2 In Complex With The
Inhibitor Olomoucine.
pdb|1WCC|A Chain A, Screening For Fragment Binding By X-Ray Crystallography
pdb|1Y8Y|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|1Y91|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|2BHE|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 5-Bromo-Indirubine
pdb|2BHH|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 4-Hydroxypiperindinesulfonyl-Indirubine
pdb|2B52|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Dph-
042562
pdb|2B53|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Din-
234325
pdb|2B54|A Chain A, Human Cyclin Dependent Kinase 2 (Ckd2)complexed With Din-
232305
pdb|2B55|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With
Indenopyraxole Din-101312
pdb|2BTR|A Chain A, Structure Of Cdk2 Complexed With Pnu-198873
pdb|2BTS|A Chain A, Structure Of Cdk2 Complexed With Pnu-230032
pdb|2C68|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C69|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6I|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6K|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6L|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6M|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6O|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2EXM|A Chain A, Human Cdk2 In Complex With Isopentenyladenine
pdb|1YKR|A Chain A, Crystal Structure Of Cdk2 With An Aminoimidazo Pyridine
Inhibitor
pdb|2A0C|X Chain X, Human Cdk2 In Complex With Olomoucine Ii, A Novel 2,6,9-
Trisubstituted Purine Cyclin-Dependent Kinase Inhibitor
pdb|2C5N|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5N|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5Y|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2A4L|A Chain A, Human Cyclin-Dependent Kinase 2 In Complex With
Roscovitine
pdb|2FVD|A Chain A, Cyclin Dependent Kinase 2 (Cdk2) With Diaminopyrimidine
Inhibitor
pdb|2I40|A Chain A, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2I40|C Chain C, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2CLX|A Chain A, 4-Arylazo-3,5-Diamino-1h-Pyrazole Cdk Inhibitors: Sar
Study, Crystal Structure In Complex With Cdk2,
Selectivity, And Cellular Effects
pdb|2DUV|A Chain A, Structure Of Cdk2 With A 3-Hydroxychromones
pdb|2UUE|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UUE|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UZN|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZO|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2V0D|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|1AQ1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Staurosporine
pdb|1HCK|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1HCL|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|2J9M|A Chain A, Crystal Structure Of Cdk2 In Complex With Macrocyclic
Aminopyrimidine
pdb|2V22|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2V22|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2VTA|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTH|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design
pdb|2VTI|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTJ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTL|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTM|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTN|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTO|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTP|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTQ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTR|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTS|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTT|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VU3|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2R64|A Chain A, Crystal Structure Of A 3-Aminoindazole Compound With Cdk2
pdb|2W05|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5b
pdb|3EID|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EID|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EOC|A Chain A, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|3EOC|C Chain C, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|2W1H|A Chain A, Fragment-Based Discovery Of The Pyrazol-4-Yl Urea
(At9283), A Multi-Targeted Kinase Inhibitor With Potent
Aurora Kinase Activity
pdb|3F5X|A Chain A, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3F5X|C Chain C, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3FZ1|A Chain A, Crystal Structure Of A Benzthiophene Inhibitor Bound To
Human Cyclin-Dependent Kinase-2 (Cdk-2)
pdb|2WEV|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WEV|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|3LFN|A Chain A, Crystal Structure Of Cdk2 With Sar57, An Aminoindazole
Type Inhibitor
pdb|3LFQ|A Chain A, Crystal Structure Of Cdk2 With Sar60, An Aminoindazole
Type Inhibitor
pdb|3LFS|A Chain A, Crystal Structure Of Cdk2 With Sar37, An Aminoindazole
Type Inhibitor
pdb|2XMY|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|2XNB|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|3LE6|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Pyrazolobenzodiazepine Inhibitor
pdb|3NS9|A Chain A, Crystal Structure Of Cdk2 In Complex With Inhibitor Bs-194
pdb|3S2P|A Chain A, Crystal Structure Of Cdk2 With A 2-Aminopyrimidine
Compound
pdb|3UNJ|A Chain A, Cdk2 In Complex With Inhibitor Yl1-038-31
pdb|3UNK|A Chain A, Cdk2 In Complex With Inhibitor Yl5-083
pdb|3TI1|A Chain A, Cdk2 In Complex With Sunitinib
pdb|3TIY|A Chain A, Cdk2 In Complex With Nsc 35676
pdb|3TIZ|A Chain A, Cdk2 In Complex With Nsc 111848
Length = 298
Score = 89.4 bits (220), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 65/206 (31%), Positives = 106/206 (51%), Gaps = 8/206 (3%)
Query: 22 GKFASVRKCTHKITKVEYAAKFIRKRRRSMDQMQDILHEAAVLYLAQKSERIVGLHEIYE 81
G + V K +K+T A K IR + + E ++L IV L ++
Sbjct: 13 GTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLK-ELNHPNIVKLLDVIH 71
Query: 82 TPHEMVLVLEMVPDGELQRLVDIQ--DGIPEQDTRSYMKQILEALAFLHDHNITHLDLKP 139
T +++ LV E + +L++ +D GIP +SY+ Q+L+ LAF H H + H DLKP
Sbjct: 72 TENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDLKP 130
Query: 140 QNILLTKDNNIKLCDFGISRVVNDVVE--VKEIIGTPDYVAPEV-LSYEPISLATDMWSV 196
QN+L+ + IKL DFG++R V E++ T Y APE+ L + S A D+WS+
Sbjct: 131 QNLLINTEGAIKLADFGLARAFGVPVRTYTHEVV-TLWYRAPEILLGCKYYSTAVDIWSL 189
Query: 197 GVLAYVLLSSHSPFAGDNKQETFLNI 222
G + +++ + F GD++ + I
Sbjct: 190 GCIFAEMVTRRALFPGDSEIDQLFRI 215
>pdb|4EOS|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
pdb|4EOS|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
Length = 300
Score = 89.0 bits (219), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 65/206 (31%), Positives = 106/206 (51%), Gaps = 8/206 (3%)
Query: 22 GKFASVRKCTHKITKVEYAAKFIRKRRRSMDQMQDILHEAAVLYLAQKSERIVGLHEIYE 81
G + V K +K+T A K IR + + E ++L IV L ++
Sbjct: 16 GTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLK-ELNHPNIVKLLDVIH 74
Query: 82 TPHEMVLVLEMVPDGELQRLVDIQ--DGIPEQDTRSYMKQILEALAFLHDHNITHLDLKP 139
T +++ LV E + +L++ +D GIP +SY+ Q+L+ LAF H H + H DLKP
Sbjct: 75 TENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDLKP 133
Query: 140 QNILLTKDNNIKLCDFGISRVVNDVVEV--KEIIGTPDYVAPEV-LSYEPISLATDMWSV 196
QN+L+ + IKL DFG++R V E++ T Y APE+ L + S A D+WS+
Sbjct: 134 QNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV-TLWYRAPEILLGCKYYSTAVDIWSL 192
Query: 197 GVLAYVLLSSHSPFAGDNKQETFLNI 222
G + +++ + F GD++ + I
Sbjct: 193 GCIFAEMVTRRALFPGDSEIDQLFRI 218
>pdb|3PJ8|A Chain A, Structure Of Cdk2 In Complex With A
Pyrazolo[4,3-D]pyrimidine Bioisostere Of Roscovitine
Length = 299
Score = 89.0 bits (219), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 65/206 (31%), Positives = 106/206 (51%), Gaps = 8/206 (3%)
Query: 22 GKFASVRKCTHKITKVEYAAKFIRKRRRSMDQMQDILHEAAVLYLAQKSERIVGLHEIYE 81
G + V K +K+T A K IR + + E ++L IV L ++
Sbjct: 14 GTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLK-ELNHPNIVKLLDVIH 72
Query: 82 TPHEMVLVLEMVPDGELQRLVDIQ--DGIPEQDTRSYMKQILEALAFLHDHNITHLDLKP 139
T +++ LV E + +L++ +D GIP +SY+ Q+L+ LAF H H + H DLKP
Sbjct: 73 TENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDLKP 131
Query: 140 QNILLTKDNNIKLCDFGISRVVNDVVE--VKEIIGTPDYVAPEV-LSYEPISLATDMWSV 196
QN+L+ + IKL DFG++R V E++ T Y APE+ L + S A D+WS+
Sbjct: 132 QNLLINTEGAIKLADFGLARAFGVPVRTYTHEVV-TLWYRAPEILLGCKYYSTAVDIWSL 190
Query: 197 GVLAYVLLSSHSPFAGDNKQETFLNI 222
G + +++ + F GD++ + I
Sbjct: 191 GCIFAEMVTRRALFPGDSEIDQLFRI 216
>pdb|3EZR|A Chain A, Cdk-2 With Indazole Inhibitor 17 Bound At Its Active Site
pdb|3EZV|A Chain A, Cdk-2 With Indazole Inhibitor 9 Bound At Its Active Site
Length = 300
Score = 89.0 bits (219), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 65/206 (31%), Positives = 106/206 (51%), Gaps = 8/206 (3%)
Query: 22 GKFASVRKCTHKITKVEYAAKFIRKRRRSMDQMQDILHEAAVLYLAQKSERIVGLHEIYE 81
G + V K +K+T A K IR + + E ++L IV L ++
Sbjct: 15 GTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLK-ELNHPNIVKLLDVIH 73
Query: 82 TPHEMVLVLEMVPDGELQRLVDIQ--DGIPEQDTRSYMKQILEALAFLHDHNITHLDLKP 139
T +++ LV E + +L++ +D GIP +SY+ Q+L+ LAF H H + H DLKP
Sbjct: 74 TENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDLKP 132
Query: 140 QNILLTKDNNIKLCDFGISRVVNDVVE--VKEIIGTPDYVAPEV-LSYEPISLATDMWSV 196
QN+L+ + IKL DFG++R V E++ T Y APE+ L + S A D+WS+
Sbjct: 133 QNLLINTEGAIKLADFGLARAFGVPVRTYTHEVV-TLWYRAPEILLGCKYYSTAVDIWSL 191
Query: 197 GVLAYVLLSSHSPFAGDNKQETFLNI 222
G + +++ + F GD++ + I
Sbjct: 192 GCIFAEMVTRRALFPGDSEIDQLFRI 217
>pdb|1QMZ|A Chain A, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1QMZ|C Chain C, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1GY3|A Chain A, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1GY3|C Chain C, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1P5E|A Chain A, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|1P5E|C Chain C, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|2CCH|A Chain A, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCH|C Chain C, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCI|A Chain A, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2CCI|C Chain C, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2G9X|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|2G9X|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|3DDP|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDP|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDQ|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DDQ|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DOG|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
pdb|3DOG|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
Length = 299
Score = 89.0 bits (219), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 65/206 (31%), Positives = 106/206 (51%), Gaps = 8/206 (3%)
Query: 22 GKFASVRKCTHKITKVEYAAKFIRKRRRSMDQMQDILHEAAVLYLAQKSERIVGLHEIYE 81
G + V K +K+T A K IR + + E ++L IV L ++
Sbjct: 14 GTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLK-ELNHPNIVKLLDVIH 72
Query: 82 TPHEMVLVLEMVPDGELQRLVDIQ--DGIPEQDTRSYMKQILEALAFLHDHNITHLDLKP 139
T +++ LV E + +L++ +D GIP +SY+ Q+L+ LAF H H + H DLKP
Sbjct: 73 TENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDLKP 131
Query: 140 QNILLTKDNNIKLCDFGISRVVNDVVEV--KEIIGTPDYVAPEV-LSYEPISLATDMWSV 196
QN+L+ + IKL DFG++R V E++ T Y APE+ L + S A D+WS+
Sbjct: 132 QNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV-TLWYRAPEILLGCKYYSTAVDIWSL 190
Query: 197 GVLAYVLLSSHSPFAGDNKQETFLNI 222
G + +++ + F GD++ + I
Sbjct: 191 GCIFAEMVTRRALFPGDSEIDQLFRI 216
>pdb|3VW6|A Chain A, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
pdb|3VW6|B Chain B, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
Length = 269
Score = 89.0 bits (219), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 72/242 (29%), Positives = 107/242 (44%), Gaps = 13/242 (5%)
Query: 20 SRGKFASVRKCTHKITKVEYAAKFIRKRRRSMDQMQDILHEAAVLYLAQKSERIVGLHEI 79
+G + V +V A K I +R Q LHE L+ K + IV
Sbjct: 17 GKGTYGIVYAGRDLSNQVRIAIKEIPERDSRYSQP---LHEEIALHKHLKHKNIVQYLGS 73
Query: 80 YETPHEMVLVLEMVPDGELQRLVDIQDGI---PEQDTRSYMKQILEALAFLHDHNITHLD 136
+ + + +E VP G L L+ + G EQ Y KQILE L +LHD+ I H D
Sbjct: 74 FSENGFIKIFMEQVPGGSLSALLRSKWGPLKDNEQTIGFYTKQILEGLKYLHDNQIVHRD 133
Query: 137 LKPQNILL-TKDNNIKLCDFGISRVVNDVVEVKE-IIGTPDYVAPEVLSYEP--ISLATD 192
+K N+L+ T +K+ DFG S+ + + E GT Y+APE++ P A D
Sbjct: 134 IKGDNVLINTYSGVLKISDFGTSKRLAGINPCTETFTGTLQYMAPEIIDKGPRGYGKAAD 193
Query: 193 MWSVGVLAYVLLSSHSPFAG-DNKQETFLNISQCNFSFHEDLFGHISSQAKDFIQSCLVT 251
+WS+G + + PF Q + F H ++ +S++AK FI C
Sbjct: 194 IWSLGCTIIEMATGKPPFYELGEPQAAMFKVGM--FKVHPEIPESMSAEAKAFILKCFEP 251
Query: 252 DP 253
DP
Sbjct: 252 DP 253
>pdb|4EOQ|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
pdb|4EOQ|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
Length = 301
Score = 89.0 bits (219), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 65/206 (31%), Positives = 106/206 (51%), Gaps = 8/206 (3%)
Query: 22 GKFASVRKCTHKITKVEYAAKFIRKRRRSMDQMQDILHEAAVLYLAQKSERIVGLHEIYE 81
G + V K +K+T A K IR + + E ++L IV L ++
Sbjct: 17 GTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLK-ELNHPNIVKLLDVIH 75
Query: 82 TPHEMVLVLEMVPDGELQRLVDIQ--DGIPEQDTRSYMKQILEALAFLHDHNITHLDLKP 139
T +++ LV E + +L++ +D GIP +SY+ Q+L+ LAF H H + H DLKP
Sbjct: 76 TENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDLKP 134
Query: 140 QNILLTKDNNIKLCDFGISRVVNDVVEV--KEIIGTPDYVAPEV-LSYEPISLATDMWSV 196
QN+L+ + IKL DFG++R V E++ T Y APE+ L + S A D+WS+
Sbjct: 135 QNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV-TLWYRAPEILLGCKYYSTAVDIWSL 193
Query: 197 GVLAYVLLSSHSPFAGDNKQETFLNI 222
G + +++ + F GD++ + I
Sbjct: 194 GCIFAEMVTRRALFPGDSEIDQLFRI 219
>pdb|4BCQ|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCQ|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 301
Score = 89.0 bits (219), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 65/206 (31%), Positives = 106/206 (51%), Gaps = 8/206 (3%)
Query: 22 GKFASVRKCTHKITKVEYAAKFIRKRRRSMDQMQDILHEAAVLYLAQKSERIVGLHEIYE 81
G + V K +K+T A K IR + + E ++L IV L ++
Sbjct: 16 GTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLK-ELNHPNIVKLLDVIH 74
Query: 82 TPHEMVLVLEMVPDGELQRLVDIQ--DGIPEQDTRSYMKQILEALAFLHDHNITHLDLKP 139
T +++ LV E + +L++ +D GIP +SY+ Q+L+ LAF H H + H DLKP
Sbjct: 75 TENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDLKP 133
Query: 140 QNILLTKDNNIKLCDFGISRVVNDVVEV--KEIIGTPDYVAPEV-LSYEPISLATDMWSV 196
QN+L+ + IKL DFG++R V E++ T Y APE+ L + S A D+WS+
Sbjct: 134 QNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV-TLWYRAPEILLGCKYYSTAVDIWSL 192
Query: 197 GVLAYVLLSSHSPFAGDNKQETFLNI 222
G + +++ + F GD++ + I
Sbjct: 193 GCIFAEMVTRRALFPGDSEIDQLFRI 218
>pdb|1JST|A Chain A, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JST|C Chain C, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JSU|A Chain A, P27(Kip1)CYCLIN ACDK2 COMPLEX
pdb|1FQ1|B Chain B, Crystal Structure Of Kinase Associated Phosphatase (Kap)
In Complex With Phospho-Cdk2
pdb|2C6T|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6T|C Chain C, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2CJM|A Chain A, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2CJM|C Chain C, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2UZB|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZB|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|4II5|A Chain A, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
pdb|4II5|C Chain C, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
Length = 298
Score = 89.0 bits (219), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 65/206 (31%), Positives = 106/206 (51%), Gaps = 8/206 (3%)
Query: 22 GKFASVRKCTHKITKVEYAAKFIRKRRRSMDQMQDILHEAAVLYLAQKSERIVGLHEIYE 81
G + V K +K+T A K IR + + E ++L IV L ++
Sbjct: 13 GTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLK-ELNHPNIVKLLDVIH 71
Query: 82 TPHEMVLVLEMVPDGELQRLVDIQ--DGIPEQDTRSYMKQILEALAFLHDHNITHLDLKP 139
T +++ LV E + +L++ +D GIP +SY+ Q+L+ LAF H H + H DLKP
Sbjct: 72 TENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDLKP 130
Query: 140 QNILLTKDNNIKLCDFGISRVVNDVVEV--KEIIGTPDYVAPEV-LSYEPISLATDMWSV 196
QN+L+ + IKL DFG++R V E++ T Y APE+ L + S A D+WS+
Sbjct: 131 QNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV-TLWYRAPEILLGCKYYSTAVDIWSL 189
Query: 197 GVLAYVLLSSHSPFAGDNKQETFLNI 222
G + +++ + F GD++ + I
Sbjct: 190 GCIFAEMVTRRALFPGDSEIDQLFRI 215
>pdb|4BC6|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Novel Bosutinib Isoform 1, Previously Thought
To Be Bosutinib
Length = 293
Score = 89.0 bits (219), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 63/212 (29%), Positives = 105/212 (49%), Gaps = 10/212 (4%)
Query: 22 GKFASVRKCTHKITKVEYAAKFIRKRRRSMDQMQDILHEAAVLYLAQKSERIVGLHEIYE 81
G F V K +K T AAK I + S ++++D + E +L IV L Y
Sbjct: 22 GAFGKVYKAKNKETGALAAAKVIETK--SEEELEDYIVEIEILATCDHP-YIVKLLGAYY 78
Query: 82 TPHEMVLVLEMVPDGELQR-LVDIQDGIPEQDTRSYMKQILEALAFLHDHNITHLDLKPQ 140
++ +++E P G + ++++ G+ E + +Q+LEAL FLH I H DLK
Sbjct: 79 HDGKLWIMIEFCPGGAVDAIMLELDRGLTEPQIQVVCRQMLEALNFLHSKRIIHRDLKAG 138
Query: 141 NILLTKDNNIKLCDFGIS-RVVNDVVEVKEIIGTPDYVAPEVLSYE-----PISLATDMW 194
N+L+T + +I+L DFG+S + + + + IGTP ++APEV+ E P D+W
Sbjct: 139 NVLMTLEGDIRLADFGVSAKNLKTLQKRDSFIGTPYWMAPEVVMCETMKDTPYDYKADIW 198
Query: 195 SVGVLAYVLLSSHSPFAGDNKQETFLNISQCN 226
S+G+ + P N L I++ +
Sbjct: 199 SLGITLIEMAQIEPPHHELNPMRVLLKIAKSD 230
>pdb|2J7T|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Su11274
pdb|4AOT|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4AOT|B Chain B, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4EQU|A Chain A, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
pdb|4EQU|B Chain B, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
Length = 302
Score = 89.0 bits (219), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 63/212 (29%), Positives = 105/212 (49%), Gaps = 10/212 (4%)
Query: 22 GKFASVRKCTHKITKVEYAAKFIRKRRRSMDQMQDILHEAAVLYLAQKSERIVGLHEIYE 81
G F V K +K T AAK I + S ++++D + E +L IV L Y
Sbjct: 30 GAFGKVYKAKNKETGALAAAKVIETK--SEEELEDYIVEIEILATCDHP-YIVKLLGAYY 86
Query: 82 TPHEMVLVLEMVPDGELQR-LVDIQDGIPEQDTRSYMKQILEALAFLHDHNITHLDLKPQ 140
++ +++E P G + ++++ G+ E + +Q+LEAL FLH I H DLK
Sbjct: 87 HDGKLWIMIEFCPGGAVDAIMLELDRGLTEPQIQVVCRQMLEALNFLHSKRIIHRDLKAG 146
Query: 141 NILLTKDNNIKLCDFGIS-RVVNDVVEVKEIIGTPDYVAPEVLSYE-----PISLATDMW 194
N+L+T + +I+L DFG+S + + + + IGTP ++APEV+ E P D+W
Sbjct: 147 NVLMTLEGDIRLADFGVSAKNLKTLQKRDSFIGTPYWMAPEVVMCETMKDTPYDYKADIW 206
Query: 195 SVGVLAYVLLSSHSPFAGDNKQETFLNISQCN 226
S+G+ + P N L I++ +
Sbjct: 207 SLGITLIEMAQIEPPHHELNPMRVLLKIAKSD 238
>pdb|1VYW|A Chain A, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|1VYW|C Chain C, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|2C4G|A Chain A, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2C4G|C Chain C, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2BPM|A Chain A, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BPM|C Chain C, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BKZ|A Chain A, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2BKZ|C Chain C, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2WIH|A Chain A, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIH|C Chain C, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIP|A Chain A, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WIP|C Chain C, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WPA|A Chain A, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WPA|C Chain C, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WXV|A Chain A, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
pdb|2WXV|C Chain C, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
Length = 309
Score = 89.0 bits (219), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 65/206 (31%), Positives = 106/206 (51%), Gaps = 8/206 (3%)
Query: 22 GKFASVRKCTHKITKVEYAAKFIRKRRRSMDQMQDILHEAAVLYLAQKSERIVGLHEIYE 81
G + V K +K+T A K IR + + E ++L IV L ++
Sbjct: 18 GTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLK-ELNHPNIVKLLDVIH 76
Query: 82 TPHEMVLVLEMVPDGELQRLVDIQ--DGIPEQDTRSYMKQILEALAFLHDHNITHLDLKP 139
T +++ LV E + +L++ +D GIP +SY+ Q+L+ LAF H H + H DLKP
Sbjct: 77 TENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDLKP 135
Query: 140 QNILLTKDNNIKLCDFGISRVVNDVVE--VKEIIGTPDYVAPEV-LSYEPISLATDMWSV 196
QN+L+ + IKL DFG++R V E++ T Y APE+ L + S A D+WS+
Sbjct: 136 QNLLINTEGAIKLADFGLARAFGVPVRTYTHEVV-TLWYRAPEILLGCKYYSTAVDIWSL 194
Query: 197 GVLAYVLLSSHSPFAGDNKQETFLNI 222
G + +++ + F GD++ + I
Sbjct: 195 GCIFAEMVTRRALFPGDSEIDQLFRI 220
>pdb|4AF3|A Chain A, Human Aurora B Kinase In Complex With Incenp And Vx-680
Length = 292
Score = 88.6 bits (218), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 64/234 (27%), Positives = 109/234 (46%), Gaps = 5/234 (2%)
Query: 20 SRGKFASVRKCTHKITKVEYAAKFIRKRRRSMDQMQDILHEAAVLYLAQKSERIVGLHEI 79
+GKF +V K + A K + K + + ++ L + I+ L+
Sbjct: 32 GKGKFGNVYLAREKKSHFIVALKVLFKSQIEKEGVEHQLRREIEIQAHLHHPNILRLYNY 91
Query: 80 YETPHEMVLVLEMVPDGELQRLVDIQDGIPEQDTRSYMKQILEALAFLHDHNITHLDLKP 139
+ + L+LE P GEL + + EQ T + M+++ +AL + H + H D+KP
Sbjct: 92 FYDRRRIYLILEYAPRGELYKELQKSCTFDEQRTATIMEELADALMYCHGKKVIHRDIKP 151
Query: 140 QNILLTKDNNIKLCDFGISRVVNDVVEVKEIIGTPDYVAPEVLSYEPISLATDMWSVGVL 199
+N+LL +K+ DFG S V + K + GT DY+ PE++ + D+W +GVL
Sbjct: 152 ENLLLGLKGELKIADFGWS-VHAPSLRRKTMCGTLDYLPPEMIEGRMHNEKVDLWCIGVL 210
Query: 200 AYVLLSSHSPFAGDNKQETFLNISQCNFSFHEDLFGHISSQAKDFIQSCLVTDP 253
Y LL + PF + ET+ I + + F + + A+D I L +P
Sbjct: 211 CYELLVGNPPFESASHNETYRRIVKVDLKFP----ASVPTGAQDLISKLLRHNP 260
>pdb|2CLQ|A Chain A, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
pdb|2CLQ|B Chain B, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
Length = 295
Score = 88.6 bits (218), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 72/242 (29%), Positives = 107/242 (44%), Gaps = 13/242 (5%)
Query: 20 SRGKFASVRKCTHKITKVEYAAKFIRKRRRSMDQMQDILHEAAVLYLAQKSERIVGLHEI 79
+G + V +V A K I +R Q LHE L+ K + IV
Sbjct: 31 GKGTYGIVYAGRDLSNQVRIAIKEIPERDSRYSQP---LHEEIALHKHLKHKNIVQYLGS 87
Query: 80 YETPHEMVLVLEMVPDGELQRLVDIQDGI---PEQDTRSYMKQILEALAFLHDHNITHLD 136
+ + + +E VP G L L+ + G EQ Y KQILE L +LHD+ I H D
Sbjct: 88 FSENGFIKIFMEQVPGGSLSALLRSKWGPLKDNEQTIGFYTKQILEGLKYLHDNQIVHRD 147
Query: 137 LKPQNILL-TKDNNIKLCDFGISRVVNDVVEVKE-IIGTPDYVAPEVLSYEP--ISLATD 192
+K N+L+ T +K+ DFG S+ + + E GT Y+APE++ P A D
Sbjct: 148 IKGDNVLINTYSGVLKISDFGTSKRLAGINPCTETFTGTLQYMAPEIIDKGPRGYGKAAD 207
Query: 193 MWSVGVLAYVLLSSHSPFAG-DNKQETFLNISQCNFSFHEDLFGHISSQAKDFIQSCLVT 251
+WS+G + + PF Q + F H ++ +S++AK FI C
Sbjct: 208 IWSLGCTIIEMATGKPPFYELGEPQAAMFKVGM--FKVHPEIPESMSAEAKAFILKCFEP 265
Query: 252 DP 253
DP
Sbjct: 266 DP 267
>pdb|1GII|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1GIJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|2DS1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
Length = 298
Score = 88.2 bits (217), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 66/206 (32%), Positives = 105/206 (50%), Gaps = 8/206 (3%)
Query: 22 GKFASVRKCTHKITKVEYAAKFIRKRRRSMDQMQDILHEAAVLYLAQKSERIVGLHEIYE 81
G + V K +K+T A K IR + + E ++L IV L ++
Sbjct: 13 GTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLK-ELNHPNIVKLLDVIH 71
Query: 82 TPHEMVLVLEMVPDGELQRLVDIQ--DGIPEQDTRSYMKQILEALAFLHDHNITHLDLKP 139
T +++ LV E V +L+ +D GIP +SY+ Q+L+ LAF H H + H DLKP
Sbjct: 72 TENKLYLVFEHV-HQDLKTFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDLKP 130
Query: 140 QNILLTKDNNIKLCDFGISRVVNDVVE--VKEIIGTPDYVAPEV-LSYEPISLATDMWSV 196
QN+L+ + IKL DFG++R V E++ T Y APE+ L + S A D+WS+
Sbjct: 131 QNLLINTEGAIKLADFGLARAFGVPVRTYTHEVV-TLWYRAPEILLGCKYYSTAVDIWSL 189
Query: 197 GVLAYVLLSSHSPFAGDNKQETFLNI 222
G + +++ + F GD++ + I
Sbjct: 190 GCIFAEMVTRRALFPGDSEIDQLFRI 215
>pdb|4EON|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EON|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 88.2 bits (217), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 64/206 (31%), Positives = 106/206 (51%), Gaps = 8/206 (3%)
Query: 22 GKFASVRKCTHKITKVEYAAKFIRKRRRSMDQMQDILHEAAVLYLAQKSERIVGLHEIYE 81
G + V K +K+T A K IR + + E ++L IV L ++
Sbjct: 15 GTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLK-ELNHPNIVKLLDVIH 73
Query: 82 TPHEMVLVLEMVPDGELQRLVDIQ--DGIPEQDTRSYMKQILEALAFLHDHNITHLDLKP 139
T +++ LV E + +L++ +D GIP +SY+ Q+L+ LAF H H + H DLKP
Sbjct: 74 TENKLYLVFEFL-SMDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDLKP 132
Query: 140 QNILLTKDNNIKLCDFGISRVVNDVVEV--KEIIGTPDYVAPEV-LSYEPISLATDMWSV 196
+N+L+ + IKL DFG++R V E++ T Y APE+ L + S A D+WS+
Sbjct: 133 ENLLINTEGAIKLADFGLARAFGVPVRTYXHEVV-TLWYRAPEILLGCKYYSTAVDIWSL 191
Query: 197 GVLAYVLLSSHSPFAGDNKQETFLNI 222
G + +++ + F GD++ + I
Sbjct: 192 GCIFAEMVTRRALFPGDSEIDQLFRI 217
>pdb|3ZUU|A Chain A, The Structure Of Ost1 (D160a, S175d) Kinase In Complex
With Gold
pdb|3ZUU|B Chain B, The Structure Of Ost1 (D160a, S175d) Kinase In Complex
With Gold
Length = 362
Score = 88.2 bits (217), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 63/237 (26%), Positives = 106/237 (44%), Gaps = 9/237 (3%)
Query: 22 GKFASVRKCTHKITKVEYAAKFIRKRRRSMDQMQDILHEAAVLYLAQKSERIVGLHEIYE 81
G F R K + A K+I + +++ + + + + + + IV E+
Sbjct: 30 GNFGVARLMRDKQSNELVAVKYIERG----EKIDENVKREIINHRSLRHPNIVRFKEVIL 85
Query: 82 TPHEMVLVLEMVPDGELQRLVDIQDGIPEQDTRSYMKQILEALAFLHDHNITHLDLKPQN 141
TP + +V+E GEL + E + R + +Q++ +++ H + H DLK +N
Sbjct: 86 TPTHLAIVMEYASGGELFERICNAGRFSEDEARFFFQQLISGVSYCHAMQVCHRDLKLEN 145
Query: 142 ILL--TKDNNIKLCDFGISRVVNDVVEVKEIIGTPDYVAPEV-LSYEPISLATDMWSVGV 198
LL + +K+C FG S+ + K+ +GTP Y+APEV L E D+WS GV
Sbjct: 146 TLLDGSPAPRLKICAFGYSKSSVLHSQPKDTVGTPAYIAPEVLLKKEYDGKVADVWSCGV 205
Query: 199 LAYVLLSSHSPFAGDNKQETFLNISQ--CNFSFHEDLFGHISSQAKDFIQSCLVTDP 253
YV+L PF + + F N + + HIS + + I V DP
Sbjct: 206 TLYVMLVGAYPFEDPEEPKNFRKTIHRILNVQYAIPDYVHISPECRHLISRIFVADP 262
>pdb|4EOM|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
pdb|4EOM|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
Length = 301
Score = 88.2 bits (217), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 64/206 (31%), Positives = 106/206 (51%), Gaps = 8/206 (3%)
Query: 22 GKFASVRKCTHKITKVEYAAKFIRKRRRSMDQMQDILHEAAVLYLAQKSERIVGLHEIYE 81
G + V K +K+T A K IR + + E ++L IV L ++
Sbjct: 17 GTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLK-ELNHPNIVKLLDVIH 75
Query: 82 TPHEMVLVLEMVPDGELQRLVDIQ--DGIPEQDTRSYMKQILEALAFLHDHNITHLDLKP 139
T +++ LV E + +L++ +D GIP +SY+ Q+L+ LAF H H + H DLKP
Sbjct: 76 TENKLYLVFEFL-SMDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDLKP 134
Query: 140 QNILLTKDNNIKLCDFGISRVVNDVVEV--KEIIGTPDYVAPEV-LSYEPISLATDMWSV 196
+N+L+ + IKL DFG++R V E++ T Y APE+ L + S A D+WS+
Sbjct: 135 ENLLINTEGAIKLADFGLARAFGVPVRTYXHEVV-TLWYRAPEILLGCKYYSTAVDIWSL 193
Query: 197 GVLAYVLLSSHSPFAGDNKQETFLNI 222
G + +++ + F GD++ + I
Sbjct: 194 GCIFAEMVTRRALFPGDSEIDQLFRI 219
>pdb|1OIT|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-dependent Kinase Inhibitors Identified Through
Structure-based Hybridisation
Length = 299
Score = 87.8 bits (216), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 64/206 (31%), Positives = 106/206 (51%), Gaps = 8/206 (3%)
Query: 22 GKFASVRKCTHKITKVEYAAKFIRKRRRSMDQMQDILHEAAVLYLAQKSERIVGLHEIYE 81
G + V K +K+T A K IR + + E ++L IV L ++
Sbjct: 14 GTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLK-ELNHPNIVKLLDVIH 72
Query: 82 TPHEMVLVLEMVPDGELQRLVDIQ--DGIPEQDTRSYMKQILEALAFLHDHNITHLDLKP 139
T +++ LV E + +L++ +D GIP +SY+ Q+L+ L+F H H + H DLKP
Sbjct: 73 TENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQLLQGLSFCHSHRVLHRDLKP 131
Query: 140 QNILLTKDNNIKLCDFGISRVVNDVVE--VKEIIGTPDYVAPEV-LSYEPISLATDMWSV 196
QN+L+ + IKL DFG++R V E++ T Y APE+ L + S A D+WS+
Sbjct: 132 QNLLINTEGAIKLADFGLARAFGVPVRTYTHEVV-TLWYRAPEILLGCKYYSTAVDIWSL 190
Query: 197 GVLAYVLLSSHSPFAGDNKQETFLNI 222
G + +++ + F GD++ + I
Sbjct: 191 GCIFAEMVTRRALFPGDSEIDQLFRI 216
>pdb|4EOK|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOK|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOL|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EOL|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 87.8 bits (216), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 65/206 (31%), Positives = 105/206 (50%), Gaps = 8/206 (3%)
Query: 22 GKFASVRKCTHKITKVEYAAKFIRKRRRSMDQMQDILHEAAVLYLAQKSERIVGLHEIYE 81
G + V K +K+T A K IR + + E ++L IV L ++
Sbjct: 16 GTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLK-ELNHPNIVKLLDVIH 74
Query: 82 TPHEMVLVLEMVPDGELQRLVDIQ--DGIPEQDTRSYMKQILEALAFLHDHNITHLDLKP 139
T +++ LV E + +L+ +D GIP +SY+ Q+L+ LAF H H + H DLKP
Sbjct: 75 TENKLYLVFEFL-SMDLKDFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDLKP 133
Query: 140 QNILLTKDNNIKLCDFGISRVVNDVVEV--KEIIGTPDYVAPEV-LSYEPISLATDMWSV 196
QN+L+ + IKL DFG++R V E++ T Y APE+ L + S A D+WS+
Sbjct: 134 QNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV-TLWYRAPEILLGCKYYSTAVDIWSL 192
Query: 197 GVLAYVLLSSHSPFAGDNKQETFLNI 222
G + +++ + F GD++ + I
Sbjct: 193 GCIFAEMVTRRALFPGDSEIDQLFRI 218
>pdb|2IW6|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW6|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
Length = 302
Score = 87.8 bits (216), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 65/206 (31%), Positives = 105/206 (50%), Gaps = 8/206 (3%)
Query: 22 GKFASVRKCTHKITKVEYAAKFIRKRRRSMDQMQDILHEAAVLYLAQKSERIVGLHEIYE 81
G + V K +K+T A K IR + + E ++L IV L ++
Sbjct: 17 GTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLK-ELNHPNIVKLLDVIH 75
Query: 82 TPHEMVLVLEMVPDGELQRLVDIQ--DGIPEQDTRSYMKQILEALAFLHDHNITHLDLKP 139
T +++ LV E + +L+ +D GIP +SY+ Q+L+ LAF H H + H DLKP
Sbjct: 76 TENKLYLVFEFL-HQDLKTFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDLKP 134
Query: 140 QNILLTKDNNIKLCDFGISRVVNDVVEV--KEIIGTPDYVAPEV-LSYEPISLATDMWSV 196
QN+L+ + IKL DFG++R V E++ T Y APE+ L + S A D+WS+
Sbjct: 135 QNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV-TLWYRAPEILLGCKYYSTAVDIWSL 193
Query: 197 GVLAYVLLSSHSPFAGDNKQETFLNI 222
G + +++ + F GD++ + I
Sbjct: 194 GCIFAEMVTRRALFPGDSEIDQLFRI 219
>pdb|4EOJ|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
pdb|4EOJ|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
Length = 302
Score = 87.8 bits (216), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 65/206 (31%), Positives = 105/206 (50%), Gaps = 8/206 (3%)
Query: 22 GKFASVRKCTHKITKVEYAAKFIRKRRRSMDQMQDILHEAAVLYLAQKSERIVGLHEIYE 81
G + V K +K+T A K IR + + E ++L IV L ++
Sbjct: 17 GTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLK-ELNHPNIVKLLDVIH 75
Query: 82 TPHEMVLVLEMVPDGELQRLVDIQ--DGIPEQDTRSYMKQILEALAFLHDHNITHLDLKP 139
T +++ LV E + +L+ +D GIP +SY+ Q+L+ LAF H H + H DLKP
Sbjct: 76 TENKLYLVFEFL-SMDLKDFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDLKP 134
Query: 140 QNILLTKDNNIKLCDFGISRVVNDVVEV--KEIIGTPDYVAPEV-LSYEPISLATDMWSV 196
QN+L+ + IKL DFG++R V E++ T Y APE+ L + S A D+WS+
Sbjct: 135 QNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV-TLWYRAPEILLGCKYYSTAVDIWSL 193
Query: 197 GVLAYVLLSSHSPFAGDNKQETFLNI 222
G + +++ + F GD++ + I
Sbjct: 194 GCIFAEMVTRRALFPGDSEIDQLFRI 219
>pdb|4EOO|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
pdb|4EOO|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
Length = 299
Score = 87.8 bits (216), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 64/206 (31%), Positives = 106/206 (51%), Gaps = 8/206 (3%)
Query: 22 GKFASVRKCTHKITKVEYAAKFIRKRRRSMDQMQDILHEAAVLYLAQKSERIVGLHEIYE 81
G + V K +K+T A K IR + + E ++L IV L ++
Sbjct: 15 GTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLK-ELNHPNIVKLLDVIH 73
Query: 82 TPHEMVLVLEMVPDGELQRLVDIQ--DGIPEQDTRSYMKQILEALAFLHDHNITHLDLKP 139
T +++ LV E + +L++ +D GIP +SY+ Q+L+ LAF H H + H DLKP
Sbjct: 74 TENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDLKP 132
Query: 140 QNILLTKDNNIKLCDFGISRVVNDVVEV--KEIIGTPDYVAPEV-LSYEPISLATDMWSV 196
+N+L+ + IKL DFG++R V E++ T Y APE+ L + S A D+WS+
Sbjct: 133 ENLLINTEGAIKLADFGLARAFGVPVRTYXHEVV-TLWYRAPEILLGCKYYSTAVDIWSL 191
Query: 197 GVLAYVLLSSHSPFAGDNKQETFLNI 222
G + +++ + F GD++ + I
Sbjct: 192 GCIFAEMVTRRALFPGDSEIDQLFRI 217
>pdb|4EOP|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOP|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 300
Score = 87.8 bits (216), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 64/206 (31%), Positives = 106/206 (51%), Gaps = 8/206 (3%)
Query: 22 GKFASVRKCTHKITKVEYAAKFIRKRRRSMDQMQDILHEAAVLYLAQKSERIVGLHEIYE 81
G + V K +K+T A K IR + + E ++L IV L ++
Sbjct: 16 GTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLK-ELNHPNIVKLLDVIH 74
Query: 82 TPHEMVLVLEMVPDGELQRLVDIQ--DGIPEQDTRSYMKQILEALAFLHDHNITHLDLKP 139
T +++ LV E + +L++ +D GIP +SY+ Q+L+ LAF H H + H DLKP
Sbjct: 75 TENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDLKP 133
Query: 140 QNILLTKDNNIKLCDFGISRVVNDVVEV--KEIIGTPDYVAPEV-LSYEPISLATDMWSV 196
+N+L+ + IKL DFG++R V E++ T Y APE+ L + S A D+WS+
Sbjct: 134 ENLLINTEGAIKLADFGLARAFGVPVRTYXHEVV-TLWYRAPEILLGCKYYSTAVDIWSL 192
Query: 197 GVLAYVLLSSHSPFAGDNKQETFLNI 222
G + +++ + F GD++ + I
Sbjct: 193 GCIFAEMVTRRALFPGDSEIDQLFRI 218
>pdb|3ZUT|A Chain A, The Structure Of Ost1 (D160a) Kinase
pdb|3ZUT|B Chain B, The Structure Of Ost1 (D160a) Kinase
Length = 362
Score = 87.8 bits (216), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 63/237 (26%), Positives = 105/237 (44%), Gaps = 9/237 (3%)
Query: 22 GKFASVRKCTHKITKVEYAAKFIRKRRRSMDQMQDILHEAAVLYLAQKSERIVGLHEIYE 81
G F R K + A K+I + +++ + + + + + + IV E+
Sbjct: 30 GNFGVARLMRDKQSNELVAVKYIERG----EKIDENVKREIINHRSLRHPNIVRFKEVIL 85
Query: 82 TPHEMVLVLEMVPDGELQRLVDIQDGIPEQDTRSYMKQILEALAFLHDHNITHLDLKPQN 141
TP + +V+E GEL + E + R + +Q++ +++ H + H DLK +N
Sbjct: 86 TPTHLAIVMEYASGGELFERICNAGRFSEDEARFFFQQLISGVSYCHAMQVCHRDLKLEN 145
Query: 142 ILL--TKDNNIKLCDFGISRVVNDVVEVKEIIGTPDYVAPEV-LSYEPISLATDMWSVGV 198
LL + +K+C FG S+ + K +GTP Y+APEV L E D+WS GV
Sbjct: 146 TLLDGSPAPRLKICAFGYSKSSVLHSQPKSTVGTPAYIAPEVLLKKEYDGKVADVWSCGV 205
Query: 199 LAYVLLSSHSPFAGDNKQETFLNISQ--CNFSFHEDLFGHISSQAKDFIQSCLVTDP 253
YV+L PF + + F N + + HIS + + I V DP
Sbjct: 206 TLYVMLVGAYPFEDPEEPKNFRKTIHRILNVQYAIPDYVHISPECRHLISRIFVADP 262
>pdb|1YHV|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Two Point
Mutations (K299r, T423e)
pdb|2HY8|1 Chain 1, Pak1 Complex With St2001
Length = 297
Score = 87.4 bits (215), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 53/185 (28%), Positives = 97/185 (52%), Gaps = 3/185 (1%)
Query: 69 KSERIVGLHEIYETPHEMVLVLEMVPDGELQRLVDIQDGIPEQDTRSYMKQILEALAFLH 128
K+ IV + Y E+ +V+E + G L +V + + E + ++ L+AL FLH
Sbjct: 75 KNPNIVNYLDSYLVGDELWVVMEYLAGGSLTDVV-TETCMDEGQIAAVCRECLQALEFLH 133
Query: 129 DHNITHLDLKPQNILLTKDNNIKLCDFGI-SRVVNDVVEVKEIIGTPDYVAPEVLSYEPI 187
+ + H D+K NILL D ++KL DFG +++ + + E++GTP ++APEV++ +
Sbjct: 134 SNQVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRSEMVGTPYWMAPEVVTRKAY 193
Query: 188 SLATDMWSVGVLAYVLLSSHSPFAGDNKQETFLNISQCNFSFHEDLFGHISSQAKDFIQS 247
D+WS+G++A ++ P+ +N I+ N + +S+ +DF+
Sbjct: 194 GPKVDIWSLGIMAIEMIEGEPPYLNENPLRALYLIA-TNGTPELQNPEKLSAIFRDFLNR 252
Query: 248 CLVTD 252
CL D
Sbjct: 253 CLDMD 257
>pdb|3PPZ|A Chain A, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
pdb|3PPZ|B Chain B, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
Length = 309
Score = 87.4 bits (215), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 60/239 (25%), Positives = 118/239 (49%), Gaps = 13/239 (5%)
Query: 22 GKFASVRKCTHKITKVEYAAKFIRKRRRSMDQMQDILHEAAVLYLAQKSERIVGLHEIYE 81
G F +V + + V A K + ++ +++ + L E A++ + ++ + + +
Sbjct: 48 GSFGTVHRAEWHGSDV--AVKILMEQDFHAERVNEFLREVAIMKRLRHPNIVLFMGAVTQ 105
Query: 82 TPHEMVLVLEMVPDGELQRLVDIQDGIPEQDTR---SYMKQILEALAFLHDHN--ITHLD 136
P+ + +V E + G L RL+ + D R S + + + +LH+ N I H D
Sbjct: 106 PPN-LSIVTEYLSRGSLYRLLHKSGAREQLDERRRLSMAYDVAKGMNYLHNRNPPIVHRD 164
Query: 137 LKPQNILLTKDNNIKLCDFGISRV-VNDVVEVKEIIGTPDYVAPEVLSYEPISLATDMWS 195
LK N+L+ K +K+CDFG+SR+ + + K GTP+++APEVL EP + +D++S
Sbjct: 165 LKSPNLLVDKKYTVKVCDFGLSRLKASXFLXSKXAAGTPEWMAPEVLRDEPSNEKSDVYS 224
Query: 196 VGVLAYVLLSSHSPFAGDNKQETFLNIS-QCNFSFHEDLFGHISSQAKDFIQSCLVTDP 253
GV+ + L + P+ N + + +C ++ +++ Q I+ C +P
Sbjct: 225 FGVILWELATLQQPWGNLNPAQVVAAVGFKCK---RLEIPRNLNPQVAAIIEGCWTNEP 280
>pdb|3SLS|A Chain A, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
pdb|3SLS|B Chain B, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
Length = 304
Score = 87.4 bits (215), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 65/237 (27%), Positives = 111/237 (46%), Gaps = 10/237 (4%)
Query: 22 GKFASVRKCTHKITKVEYAAKFIRKRRRSMDQMQDILHEAAVLYLAQKSERIVGLHEIYE 81
G V K +HK + + A K I + + Q I+ E VL+ S IVG + +
Sbjct: 36 GNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQ-IIRELQVLHECN-SPYIVGFYGAFY 93
Query: 82 TPHEMVLVLEMVPDGELQRLVDIQDGIPEQDTRSYMKQILEALAFLHD-HNITHLDLKPQ 140
+ E+ + +E + G L +++ IPEQ +++ L +L + H I H D+KP
Sbjct: 94 SDGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAVIKGLTYLREKHKIMHRDVKPS 153
Query: 141 NILLTKDNNIKLCDFGISRVVNDVVEVKEIIGTPDYVAPEVLSYEPISLATDMWSVGVLA 200
NIL+ IKLCDFG+S + D + +GT Y++PE L S+ +D+WS+G+
Sbjct: 154 NILVNSRGEIKLCDFGVSGQLIDSM-ANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSL 212
Query: 201 YVLLSSHSPFAGDNKQETFLNISQCNFSFHED----LFGHISSQAKDFIQSCLVTDP 253
+ P + + ++ +E G S + +DF+ CL+ +P
Sbjct: 213 VEMAVGRYPIGSGSGSMAIFEL--LDYIVNEPPPKLPSGVFSLEFQDFVNKCLIKNP 267
>pdb|3UDB|A Chain A, Crystal Structure Of Snrk2.6
pdb|3UDB|B Chain B, Crystal Structure Of Snrk2.6
pdb|3UDB|C Chain C, Crystal Structure Of Snrk2.6
pdb|3UDB|D Chain D, Crystal Structure Of Snrk2.6
pdb|3UDB|E Chain E, Crystal Structure Of Snrk2.6
pdb|3UDB|F Chain F, Crystal Structure Of Snrk2.6
Length = 317
Score = 87.4 bits (215), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 63/237 (26%), Positives = 104/237 (43%), Gaps = 9/237 (3%)
Query: 22 GKFASVRKCTHKITKVEYAAKFIRKRRRSMDQMQDILHEAAVLYLAQKSERIVGLHEIYE 81
G F R K A K+I + +++ + + + + + + IV E+
Sbjct: 30 GNFGVARLMRDKQANELVAVKYIERG----EKIDENVKREIINHRSLRHPNIVRFKEVIL 85
Query: 82 TPHEMVLVLEMVPDGELQRLVDIQDGIPEQDTRSYMKQILEALAFLHDHNITHLDLKPQN 141
TP + +V+E GEL + E + R + +Q++ +++ H + H DLK +N
Sbjct: 86 TPTHLAIVMEYASGGELFERICNAGRFSEDEARFFFQQLISGVSYAHAMQVAHRDLKLEN 145
Query: 142 ILL--TKDNNIKLCDFGISRVVNDVVEVKEIIGTPDYVAPEV-LSYEPISLATDMWSVGV 198
LL + +K+ DFG S+ + K +GTP Y+APEV L E D+WS GV
Sbjct: 146 TLLDGSPAPRLKIADFGYSKASVLHSQPKSAVGTPAYIAPEVLLKKEYDGKVADVWSCGV 205
Query: 199 LAYVLLSSHSPFAGDNKQETFLNISQ--CNFSFHEDLFGHISSQAKDFIQSCLVTDP 253
YV+L PF + + F N + + HIS + + I V DP
Sbjct: 206 TLYVMLVGAYPFEDPEEPKNFRKTIHRILNVQYAIPDYVHISPECRHLISRIFVADP 262
>pdb|3NUP|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor
pdb|3NUX|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor
pdb|4AUA|A Chain A, Liganded X-ray Crystal Structure Of Cyclin Dependent
Kinase 6 (cdk6)
pdb|4EZ5|A Chain A, Cdk6 (monomeric) In Complex With Inhibitor
Length = 307
Score = 87.0 bits (214), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 48/132 (36%), Positives = 72/132 (54%), Gaps = 3/132 (2%)
Query: 85 EMVLVLEMVPDGELQRLVD--IQDGIPEQDTRSYMKQILEALAFLHDHNITHLDLKPQNI 142
++ LV E V D +L +D + G+P + + M Q+L L FLH H + H DLKPQNI
Sbjct: 93 KLTLVFEHV-DQDLTTYLDKVPEPGVPTETIKDMMFQLLRGLDFLHSHRVVHRDLKPQNI 151
Query: 143 LLTKDNNIKLCDFGISRVVNDVVEVKEIIGTPDYVAPEVLSYEPISLATDMWSVGVLAYV 202
L+T IKL DFG++R+ + + + ++ T Y APEVL + D+WSVG +
Sbjct: 152 LVTSSGQIKLADFGLARIYSFQMALTSVVVTLWYRAPEVLLQSSYATPVDLWSVGCIFAE 211
Query: 203 LLSSHSPFAGDN 214
+ F G +
Sbjct: 212 MFRRKPLFRGSS 223
>pdb|1OIR|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
Length = 299
Score = 87.0 bits (214), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 64/206 (31%), Positives = 105/206 (50%), Gaps = 8/206 (3%)
Query: 22 GKFASVRKCTHKITKVEYAAKFIRKRRRSMDQMQDILHEAAVLYLAQKSERIVGLHEIYE 81
G + V K +K+T A IR + + E ++L IV L ++
Sbjct: 14 GTYGVVYKARNKLTGEVVALXKIRLDTETEGVPSTAIREISLLK-ELNHPNIVKLLDVIH 72
Query: 82 TPHEMVLVLEMVPDGELQRLVDIQ--DGIPEQDTRSYMKQILEALAFLHDHNITHLDLKP 139
T +++ LV E + +L++ +D GIP +SY+ Q+L+ LAF H H + H DLKP
Sbjct: 73 TENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDLKP 131
Query: 140 QNILLTKDNNIKLCDFGISRVVNDVVE--VKEIIGTPDYVAPEV-LSYEPISLATDMWSV 196
QN+L+ + IKL DFG++R V E++ T Y APE+ L + S A D+WS+
Sbjct: 132 QNLLINTEGAIKLADFGLARAFGVPVRTYTHEVV-TLWYRAPEILLGCKYYSTAVDIWSL 190
Query: 197 GVLAYVLLSSHSPFAGDNKQETFLNI 222
G + +++ + F GD++ + I
Sbjct: 191 GCIFAEMVTRRALFPGDSEIDQLFRI 216
>pdb|1H01|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
Length = 298
Score = 87.0 bits (214), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 64/206 (31%), Positives = 105/206 (50%), Gaps = 8/206 (3%)
Query: 22 GKFASVRKCTHKITKVEYAAKFIRKRRRSMDQMQDILHEAAVLYLAQKSERIVGLHEIYE 81
G + V K +K+T A IR + + E ++L IV L ++
Sbjct: 13 GTYGVVYKARNKLTGEVVALXKIRLDTETEGVPSTAIREISLLK-ELNHPNIVKLLDVIH 71
Query: 82 TPHEMVLVLEMVPDGELQRLVDIQ--DGIPEQDTRSYMKQILEALAFLHDHNITHLDLKP 139
T +++ LV E + +L++ +D GIP +SY+ Q+L+ LAF H H + H DLKP
Sbjct: 72 TENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDLKP 130
Query: 140 QNILLTKDNNIKLCDFGISRVVNDVVE--VKEIIGTPDYVAPEV-LSYEPISLATDMWSV 196
QN+L+ + IKL DFG++R V E++ T Y APE+ L + S A D+WS+
Sbjct: 131 QNLLINTEGAIKLADFGLARAFGVPVRTYTHEVV-TLWYRAPEILLGCKYYSTAVDIWSL 189
Query: 197 GVLAYVLLSSHSPFAGDNKQETFLNI 222
G + +++ + F GD++ + I
Sbjct: 190 GCIFAEMVTRRALFPGDSEIDQLFRI 215
>pdb|1JOW|B Chain B, Crystal Structure Of A Complex Of Human Cdk6 And A Viral
Cyclin
pdb|1XO2|B Chain B, Crystal Structure Of A Human Cyclin-Dependent Kinase 6
Complex With A Flavonol Inhibitor, Fisetin
pdb|2EUF|B Chain B, X-Ray Structure Of Human Cdk6-Vcyclin In Complex With The
Inhibitor Pd0332991
pdb|2F2C|B Chain B, X-Ray Structure Of Human Cdk6-Vcyclinwith The Inhibitor
Aminopurvalanol
Length = 308
Score = 87.0 bits (214), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 48/132 (36%), Positives = 72/132 (54%), Gaps = 3/132 (2%)
Query: 85 EMVLVLEMVPDGELQRLVD--IQDGIPEQDTRSYMKQILEALAFLHDHNITHLDLKPQNI 142
++ LV E V D +L +D + G+P + + M Q+L L FLH H + H DLKPQNI
Sbjct: 93 KLTLVFEHV-DQDLTTYLDKVPEPGVPTETIKDMMFQLLRGLDFLHSHRVVHRDLKPQNI 151
Query: 143 LLTKDNNIKLCDFGISRVVNDVVEVKEIIGTPDYVAPEVLSYEPISLATDMWSVGVLAYV 202
L+T IKL DFG++R+ + + + ++ T Y APEVL + D+WSVG +
Sbjct: 152 LVTSSGQIKLADFGLARIYSFQMALTSVVVTLWYRAPEVLLQSSYATPVDLWSVGCIFAE 211
Query: 203 LLSSHSPFAGDN 214
+ F G +
Sbjct: 212 MFRRKPLFRGSS 223
>pdb|1BI8|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI8|C Chain C, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI7|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structure Of The Cdk6-P16ink4a Tumor Suppressor
Complex
pdb|1BLX|A Chain A, P19ink4dCDK6 COMPLEX
pdb|1G3N|A Chain A, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
pdb|1G3N|E Chain E, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
Length = 326
Score = 86.7 bits (213), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 48/132 (36%), Positives = 72/132 (54%), Gaps = 3/132 (2%)
Query: 85 EMVLVLEMVPDGELQRLVD--IQDGIPEQDTRSYMKQILEALAFLHDHNITHLDLKPQNI 142
++ LV E V D +L +D + G+P + + M Q+L L FLH H + H DLKPQNI
Sbjct: 93 KLTLVFEHV-DQDLTTYLDKVPEPGVPTETIKDMMFQLLRGLDFLHSHRVVHRDLKPQNI 151
Query: 143 LLTKDNNIKLCDFGISRVVNDVVEVKEIIGTPDYVAPEVLSYEPISLATDMWSVGVLAYV 202
L+T IKL DFG++R+ + + + ++ T Y APEVL + D+WSVG +
Sbjct: 152 LVTSSGQIKLADFGLARIYSFQMALTSVVVTLWYRAPEVLLQSSYATPVDLWSVGCIFAE 211
Query: 203 LLSSHSPFAGDN 214
+ F G +
Sbjct: 212 MFRRKPLFRGSS 223
>pdb|2R0U|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 54
pdb|2QHM|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2a
pdb|2QHN|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1a
pdb|3TKH|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S01
pdb|3TKI|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S25
Length = 323
Score = 86.7 bits (213), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 56/197 (28%), Positives = 102/197 (51%), Gaps = 14/197 (7%)
Query: 22 GKFASVRKCTHKITKVEYAAKFIRKRRRSMDQMQDILHEAAVLYLAQKSERIVGLHEIYE 81
G + V+ +++T+ A K + +R++D ++I E + + E +V +
Sbjct: 18 GAYGEVQLAVNRVTEEAVAVKIV-DMKRAVDCPENIKKEICINKMLN-HENVVKFYGHRR 75
Query: 82 TPHEMVLVLEMVPDGELQRLVDIQDGIPEQDTRSYMKQILEALAFLHDHNITHLDLKPQN 141
+ L LE GEL ++ G+PE D + + Q++ + +LH ITH D+KP+N
Sbjct: 76 EGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIGITHRDIKPEN 135
Query: 142 ILLTKDNNIKLCDFGIS---RVVNDVVEVKEIIGTPDYVAPEVLSY-----EPISLATDM 193
+LL + +N+K+ DFG++ R N + ++ GT YVAPE+L EP+ D+
Sbjct: 136 LLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPV----DV 191
Query: 194 WSVGVLAYVLLSSHSPF 210
WS G++ +L+ P+
Sbjct: 192 WSCGIVLTAMLAGELPW 208
>pdb|2HOG|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 20
pdb|2HXL|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1
pdb|2HXQ|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2
pdb|2HY0|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 22
pdb|3F9N|A Chain A, Crystal Structure Of Chk1 Kinase In Complex With Inhibitor
38
Length = 322
Score = 86.3 bits (212), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 56/197 (28%), Positives = 102/197 (51%), Gaps = 14/197 (7%)
Query: 22 GKFASVRKCTHKITKVEYAAKFIRKRRRSMDQMQDILHEAAVLYLAQKSERIVGLHEIYE 81
G + V+ +++T+ A K + +R++D ++I E + + E +V +
Sbjct: 17 GAYGEVQLAVNRVTEEAVAVKIV-DMKRAVDCPENIKKEICINKMLN-HENVVKFYGHRR 74
Query: 82 TPHEMVLVLEMVPDGELQRLVDIQDGIPEQDTRSYMKQILEALAFLHDHNITHLDLKPQN 141
+ L LE GEL ++ G+PE D + + Q++ + +LH ITH D+KP+N
Sbjct: 75 EGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIGITHRDIKPEN 134
Query: 142 ILLTKDNNIKLCDFGIS---RVVNDVVEVKEIIGTPDYVAPEVLSY-----EPISLATDM 193
+LL + +N+K+ DFG++ R N + ++ GT YVAPE+L EP+ D+
Sbjct: 135 LLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPV----DV 190
Query: 194 WSVGVLAYVLLSSHSPF 210
WS G++ +L+ P+
Sbjct: 191 WSCGIVLTAMLAGELPW 207
>pdb|4EOI|A Chain A, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOI|C Chain C, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 299
Score = 86.3 bits (212), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 66/209 (31%), Positives = 104/209 (49%), Gaps = 14/209 (6%)
Query: 22 GKFASVRKCTHKITKVEYAAKFIRKRRRSMDQMQDILHEAAVLYLAQKSERIVGLHEIYE 81
G + V K +K+T A K IR + + E ++L IV L ++
Sbjct: 14 GTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLK-ELNHPNIVKLLDVIH 72
Query: 82 TPHEMVLVLEMVPDGELQRLVDIQD-----GIPEQDTRSYMKQILEALAFLHDHNITHLD 136
T +++ LV E + Q L D D GIP +SY+ Q+L+ LAF H H + H D
Sbjct: 73 TENKLYLVFEFL----HQDLKDFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHRD 128
Query: 137 LKPQNILLTKDNNIKLCDFGISRVVNDVVEV--KEIIGTPDYVAPEV-LSYEPISLATDM 193
LKP+N+L+ + IKL DFG++R V E++ T Y APE+ L + S A D+
Sbjct: 129 LKPENLLINTEGAIKLADFGLARAFGVPVRTYXHEVV-TLWYRAPEILLGCKYYSTAVDI 187
Query: 194 WSVGVLAYVLLSSHSPFAGDNKQETFLNI 222
WS+G + +++ + F GD++ + I
Sbjct: 188 WSLGCIFAEMVTRRALFPGDSEIDQLFRI 216
>pdb|2E9V|A Chain A, Structure Of H-Chk1 Complexed With A859017
pdb|2E9V|B Chain B, Structure Of H-Chk1 Complexed With A859017
Length = 268
Score = 86.3 bits (212), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 54/195 (27%), Positives = 100/195 (51%), Gaps = 6/195 (3%)
Query: 20 SRGKFASVRKCTHKITKVEYAAKFIRKRRRSMDQMQDILHEAAVLYLAQKSERIVGLHEI 79
G + V+ +++T+ A K + +R++D ++I E + + E +V +
Sbjct: 15 GEGAYGEVQLAVNRVTEEAVAVKIV-DMKRAVDCPENIKKEICINKMLN-HENVVKFYGH 72
Query: 80 YETPHEMVLVLEMVPDGELQRLVDIQDGIPEQDTRSYMKQILEALAFLHDHNITHLDLKP 139
+ L LE GEL ++ G+PE D + + Q++ + +LH ITH D+KP
Sbjct: 73 RREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIGITHRDIKP 132
Query: 140 QNILLTKDNNIKLCDFGIS---RVVNDVVEVKEIIGTPDYVAPEVLSYEPI-SLATDMWS 195
+N+LL + +N+K+ DFG++ R N + ++ GT YVAPE+L + D+WS
Sbjct: 133 ENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWS 192
Query: 196 VGVLAYVLLSSHSPF 210
G++ +L+ P+
Sbjct: 193 CGIVLTAMLAGELPW 207
>pdb|1ZYS|A Chain A, Co-Crystal Structure Of Checkpoint Kinase Chk1 With A
Pyrrolo-Pyridine Inhibitor
Length = 273
Score = 86.3 bits (212), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 54/195 (27%), Positives = 100/195 (51%), Gaps = 6/195 (3%)
Query: 20 SRGKFASVRKCTHKITKVEYAAKFIRKRRRSMDQMQDILHEAAVLYLAQKSERIVGLHEI 79
G + V+ +++T+ A K + +R++D ++I E + + E +V +
Sbjct: 16 GEGAYGEVQLAVNRVTEEAVAVKIV-DMKRAVDCPENIKKEICINAMLN-HENVVKFYGH 73
Query: 80 YETPHEMVLVLEMVPDGELQRLVDIQDGIPEQDTRSYMKQILEALAFLHDHNITHLDLKP 139
+ L LE GEL ++ G+PE D + + Q++ + +LH ITH D+KP
Sbjct: 74 RREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIGITHRDIKP 133
Query: 140 QNILLTKDNNIKLCDFGIS---RVVNDVVEVKEIIGTPDYVAPEVLSYEPI-SLATDMWS 195
+N+LL + +N+K+ DFG++ R N + ++ GT YVAPE+L + D+WS
Sbjct: 134 ENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWS 193
Query: 196 VGVLAYVLLSSHSPF 210
G++ +L+ P+
Sbjct: 194 CGIVLTAMLAGELPW 208
>pdb|2BR1|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRB|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRG|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRH|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRM|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRN|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRO|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2C3J|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3K|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3L|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2CGU|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGV|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGW|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGX|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|3NLB|A Chain A, Novel Kinase Profile Highlights The Temporal Basis Of
Context Dependent Checkpoint Pathways To Cell Death
Length = 297
Score = 86.3 bits (212), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 56/199 (28%), Positives = 102/199 (51%), Gaps = 14/199 (7%)
Query: 20 SRGKFASVRKCTHKITKVEYAAKFIRKRRRSMDQMQDILHEAAVLYLAQKSERIVGLHEI 79
G + V+ +++T+ A K + +R++D ++I E + + E +V +
Sbjct: 16 GEGAYGEVQLAVNRVTEEAVAVKIV-DMKRAVDCPENIKKEICINKMLN-HENVVKFYGH 73
Query: 80 YETPHEMVLVLEMVPDGELQRLVDIQDGIPEQDTRSYMKQILEALAFLHDHNITHLDLKP 139
+ L LE GEL ++ G+PE D + + Q++ + +LH ITH D+KP
Sbjct: 74 RREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIGITHRDIKP 133
Query: 140 QNILLTKDNNIKLCDFGIS---RVVNDVVEVKEIIGTPDYVAPEVLSY-----EPISLAT 191
+N+LL + +N+K+ DFG++ R N + ++ GT YVAPE+L EP+
Sbjct: 134 ENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPV---- 189
Query: 192 DMWSVGVLAYVLLSSHSPF 210
D+WS G++ +L+ P+
Sbjct: 190 DVWSCGIVLTAMLAGELPW 208
>pdb|1IA8|A Chain A, The 1.7 A Crystal Structure Of Human Cell Cycle Checkpoint
Kinase Chk1
pdb|1NVQ|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1UCN-01
pdb|1NVR|A Chain A, The Complex Structure Of Checkpoint Kinase
Chk1STAUROSPORINE
pdb|1NVS|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1SB218078
pdb|2WMQ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMR|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMS|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMT|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMU|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMV|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMX|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMW|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEY|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XF0|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEZ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2X8D|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2X8I|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YM3|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM4|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM5|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM6|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM7|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM8|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YDI|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 289
Score = 86.3 bits (212), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 56/199 (28%), Positives = 102/199 (51%), Gaps = 14/199 (7%)
Query: 20 SRGKFASVRKCTHKITKVEYAAKFIRKRRRSMDQMQDILHEAAVLYLAQKSERIVGLHEI 79
G + V+ +++T+ A K + +R++D ++I E + + E +V +
Sbjct: 16 GEGAYGEVQLAVNRVTEEAVAVKIV-DMKRAVDCPENIKKEICINKMLN-HENVVKFYGH 73
Query: 80 YETPHEMVLVLEMVPDGELQRLVDIQDGIPEQDTRSYMKQILEALAFLHDHNITHLDLKP 139
+ L LE GEL ++ G+PE D + + Q++ + +LH ITH D+KP
Sbjct: 74 RREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIGITHRDIKP 133
Query: 140 QNILLTKDNNIKLCDFGIS---RVVNDVVEVKEIIGTPDYVAPEVLSY-----EPISLAT 191
+N+LL + +N+K+ DFG++ R N + ++ GT YVAPE+L EP+
Sbjct: 134 ENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPV---- 189
Query: 192 DMWSVGVLAYVLLSSHSPF 210
D+WS G++ +L+ P+
Sbjct: 190 DVWSCGIVLTAMLAGELPW 208
>pdb|3JVR|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
pdb|3JVS|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
Length = 271
Score = 86.3 bits (212), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 54/195 (27%), Positives = 100/195 (51%), Gaps = 6/195 (3%)
Query: 20 SRGKFASVRKCTHKITKVEYAAKFIRKRRRSMDQMQDILHEAAVLYLAQKSERIVGLHEI 79
G + V+ +++T+ A K + +R++D ++I E + + E +V +
Sbjct: 15 GEGAYGEVQLAVNRVTEEAVAVKIV-DMKRAVDCPENIKKEICINKMLN-HENVVKFYGH 72
Query: 80 YETPHEMVLVLEMVPDGELQRLVDIQDGIPEQDTRSYMKQILEALAFLHDHNITHLDLKP 139
+ L LE GEL ++ G+PE D + + Q++ + +LH ITH D+KP
Sbjct: 73 RREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIGITHRDIKP 132
Query: 140 QNILLTKDNNIKLCDFGIS---RVVNDVVEVKEIIGTPDYVAPEVLSYEPI-SLATDMWS 195
+N+LL + +N+K+ DFG++ R N + ++ GT YVAPE+L + D+WS
Sbjct: 133 ENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWS 192
Query: 196 VGVLAYVLLSSHSPF 210
G++ +L+ P+
Sbjct: 193 CGIVLTAMLAGELPW 207
>pdb|1ZLT|A Chain A, Crystal Structure Of Chk1 Complexed With A Hymenaldisine
Analog
pdb|2GDO|A Chain A, 4-(aminoalkylamino)-3-benzimidazole-quinolinones As Potent
Chk1 Inhibitors
Length = 295
Score = 86.3 bits (212), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 56/199 (28%), Positives = 102/199 (51%), Gaps = 14/199 (7%)
Query: 20 SRGKFASVRKCTHKITKVEYAAKFIRKRRRSMDQMQDILHEAAVLYLAQKSERIVGLHEI 79
G + V+ +++T+ A K + +R++D ++I E + + E +V +
Sbjct: 16 GEGAYGEVQLAVNRVTEEAVAVKIV-DMKRAVDCPENIKKEICINKMLN-HENVVKFYGH 73
Query: 80 YETPHEMVLVLEMVPDGELQRLVDIQDGIPEQDTRSYMKQILEALAFLHDHNITHLDLKP 139
+ L LE GEL ++ G+PE D + + Q++ + +LH ITH D+KP
Sbjct: 74 RREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIGITHRDIKP 133
Query: 140 QNILLTKDNNIKLCDFGIS---RVVNDVVEVKEIIGTPDYVAPEVLSY-----EPISLAT 191
+N+LL + +N+K+ DFG++ R N + ++ GT YVAPE+L EP+
Sbjct: 134 ENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPV---- 189
Query: 192 DMWSVGVLAYVLLSSHSPF 210
D+WS G++ +L+ P+
Sbjct: 190 DVWSCGIVLTAMLAGELPW 208
>pdb|3P86|A Chain A, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
pdb|3P86|B Chain B, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
Length = 309
Score = 86.3 bits (212), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 59/239 (24%), Positives = 118/239 (49%), Gaps = 13/239 (5%)
Query: 22 GKFASVRKCTHKITKVEYAAKFIRKRRRSMDQMQDILHEAAVLYLAQKSERIVGLHEIYE 81
G F +V + + V A K + ++ +++ + L E A++ + ++ + + +
Sbjct: 48 GSFGTVHRAEWHGSDV--AVKILMEQDFHAERVNEFLREVAIMKRLRHPNIVLFMGAVTQ 105
Query: 82 TPHEMVLVLEMVPDGELQRLVDIQDGIPEQDTR---SYMKQILEALAFLHDHN--ITHLD 136
P+ + +V E + G L RL+ + D R S + + + +LH+ N I H +
Sbjct: 106 PPN-LSIVTEYLSRGSLYRLLHKSGAREQLDERRRLSMAYDVAKGMNYLHNRNPPIVHRN 164
Query: 137 LKPQNILLTKDNNIKLCDFGISRV-VNDVVEVKEIIGTPDYVAPEVLSYEPISLATDMWS 195
LK N+L+ K +K+CDFG+SR+ + + K GTP+++APEVL EP + +D++S
Sbjct: 165 LKSPNLLVDKKYTVKVCDFGLSRLKASTFLSSKSAAGTPEWMAPEVLRDEPSNEKSDVYS 224
Query: 196 VGVLAYVLLSSHSPFAGDNKQETFLNIS-QCNFSFHEDLFGHISSQAKDFIQSCLVTDP 253
GV+ + L + P+ N + + +C ++ +++ Q I+ C +P
Sbjct: 225 FGVILWELATLQQPWGNLNPAQVVAAVGFKCK---RLEIPRNLNPQVAAIIEGCWTNEP 280
>pdb|3OT3|A Chain A, X-Ray Crystal Structure Of Compound 22k Bound To Human
Chk1 Kinase Domain
pdb|3OT8|A Chain A, X-Ray Crystal Structure Of Compound 17r Bound To Human
Chk1 Kinase Domain
pdb|3PA3|A Chain A, X-Ray Crystal Structure Of Compound 70 Bound To Human Chk1
Kinase Domain
pdb|3PA4|A Chain A, X-Ray Crystal Structure Of Compound 2a Bound To Human Chk1
Kinase Domain
pdb|3PA5|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
pdb|3U9N|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
Length = 273
Score = 86.3 bits (212), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 54/195 (27%), Positives = 100/195 (51%), Gaps = 6/195 (3%)
Query: 20 SRGKFASVRKCTHKITKVEYAAKFIRKRRRSMDQMQDILHEAAVLYLAQKSERIVGLHEI 79
G + V+ +++T+ A K + +R++D ++I E + + E +V +
Sbjct: 15 GEGAYGEVQLAVNRVTEEAVAVKIV-DMKRAVDCPENIKKEICINKMLN-HENVVKFYGH 72
Query: 80 YETPHEMVLVLEMVPDGELQRLVDIQDGIPEQDTRSYMKQILEALAFLHDHNITHLDLKP 139
+ L LE GEL ++ G+PE D + + Q++ + +LH ITH D+KP
Sbjct: 73 RREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIGITHRDIKP 132
Query: 140 QNILLTKDNNIKLCDFGIS---RVVNDVVEVKEIIGTPDYVAPEVLSYEPI-SLATDMWS 195
+N+LL + +N+K+ DFG++ R N + ++ GT YVAPE+L + D+WS
Sbjct: 133 ENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWS 192
Query: 196 VGVLAYVLLSSHSPF 210
G++ +L+ P+
Sbjct: 193 CGIVLTAMLAGELPW 207
>pdb|4FT3|A Chain A, Crystal Structure Of The Chk1
pdb|4GH2|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 86.3 bits (212), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 59/208 (28%), Positives = 106/208 (50%), Gaps = 16/208 (7%)
Query: 20 SRGKFASVRKCTHKITKVEYAAKFIRKRRRSMDQMQDILHEAAVLYLAQKSERIVGLHEI 79
G + V+ +++T+ A K + +R++D ++I E + + E +V +
Sbjct: 15 GEGAYGEVQLAVNRVTEEAVAVKIV-DMKRAVDCPENIKKEICINKMLN-HENVVKFYGH 72
Query: 80 YETPHEMVLVLEMVPDGELQRLVDIQDGIPEQDTRSYMKQILEALAFLHDHNITHLDLKP 139
+ L LE GEL ++ G+PE D + + Q++ + +LH ITH D+KP
Sbjct: 73 RREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIGITHRDIKP 132
Query: 140 QNILLTKDNNIKLCDFGIS---RVVNDVVEVKEIIGTPDYVAPEVLSY-----EPISLAT 191
+N+LL + +N+K+ DFG++ R N + ++ GT YVAPE+L EP+
Sbjct: 133 ENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPELLKRREFHAEPV---- 188
Query: 192 DMWSVGVLAYVLLSSHSPF--AGDNKQE 217
D+WS G++ +L+ P+ D+ QE
Sbjct: 189 DVWSCGIVLTAMLAGELPWDQPSDSXQE 216
>pdb|2GHG|A Chain A, H-Chk1 Complexed With A431994
pdb|2YWP|A Chain A, Crystal Structure Of Chk1 With A Urea Inhibitor
pdb|2E9N|A Chain A, Structure Of H-chk1 Complexed With A767085
pdb|2E9O|A Chain A, Structure Of H-Chk1 Complexed With Aa582939
pdb|2E9P|A Chain A, Structure Of H-Chk1 Complexed With A771129
pdb|2E9U|A Chain A, Structure Of H-Chk1 Complexed With A780125
Length = 269
Score = 86.3 bits (212), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 54/195 (27%), Positives = 100/195 (51%), Gaps = 6/195 (3%)
Query: 20 SRGKFASVRKCTHKITKVEYAAKFIRKRRRSMDQMQDILHEAAVLYLAQKSERIVGLHEI 79
G + V+ +++T+ A K + +R++D ++I E + + E +V +
Sbjct: 15 GEGAYGEVQLAVNRVTEEAVAVKIV-DMKRAVDCPENIKKEICINKMLN-HENVVKFYGH 72
Query: 80 YETPHEMVLVLEMVPDGELQRLVDIQDGIPEQDTRSYMKQILEALAFLHDHNITHLDLKP 139
+ L LE GEL ++ G+PE D + + Q++ + +LH ITH D+KP
Sbjct: 73 RREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIGITHRDIKP 132
Query: 140 QNILLTKDNNIKLCDFGIS---RVVNDVVEVKEIIGTPDYVAPEVLSYEPI-SLATDMWS 195
+N+LL + +N+K+ DFG++ R N + ++ GT YVAPE+L + D+WS
Sbjct: 133 ENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWS 192
Query: 196 VGVLAYVLLSSHSPF 210
G++ +L+ P+
Sbjct: 193 CGIVLTAMLAGELPW 207
>pdb|2X8E|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YER|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YEX|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YDK|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 86.3 bits (212), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 54/195 (27%), Positives = 100/195 (51%), Gaps = 6/195 (3%)
Query: 20 SRGKFASVRKCTHKITKVEYAAKFIRKRRRSMDQMQDILHEAAVLYLAQKSERIVGLHEI 79
G + V+ +++T+ A K + +R++D ++I E + + E +V +
Sbjct: 16 GEGAYGEVQLAVNRVTEEAVAVKIV-DMKRAVDCPENIKKEICINKMLN-HENVVKFYGH 73
Query: 80 YETPHEMVLVLEMVPDGELQRLVDIQDGIPEQDTRSYMKQILEALAFLHDHNITHLDLKP 139
+ L LE GEL ++ G+PE D + + Q++ + +LH ITH D+KP
Sbjct: 74 RREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIGITHRDIKP 133
Query: 140 QNILLTKDNNIKLCDFGIS---RVVNDVVEVKEIIGTPDYVAPEVLSYEPI-SLATDMWS 195
+N+LL + +N+K+ DFG++ R N + ++ GT YVAPE+L + D+WS
Sbjct: 134 ENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWS 193
Query: 196 VGVLAYVLLSSHSPF 210
G++ +L+ P+
Sbjct: 194 CGIVLTAMLAGELPW 208
>pdb|2AYP|A Chain A, Crystal Structure Of Chk1 With An Indol Inhibitor
Length = 269
Score = 86.3 bits (212), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 54/195 (27%), Positives = 100/195 (51%), Gaps = 6/195 (3%)
Query: 20 SRGKFASVRKCTHKITKVEYAAKFIRKRRRSMDQMQDILHEAAVLYLAQKSERIVGLHEI 79
G + V+ +++T+ A K + +R++D ++I E + + E +V +
Sbjct: 16 GEGAYGEVQLAVNRVTEEAVAVKIV-DMKRAVDCPENIKKEICINKMLN-HENVVKFYGH 73
Query: 80 YETPHEMVLVLEMVPDGELQRLVDIQDGIPEQDTRSYMKQILEALAFLHDHNITHLDLKP 139
+ L LE GEL ++ G+PE D + + Q++ + +LH ITH D+KP
Sbjct: 74 RREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIGITHRDIKP 133
Query: 140 QNILLTKDNNIKLCDFGIS---RVVNDVVEVKEIIGTPDYVAPEVLSYEPI-SLATDMWS 195
+N+LL + +N+K+ DFG++ R N + ++ GT YVAPE+L + D+WS
Sbjct: 134 ENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWS 193
Query: 196 VGVLAYVLLSSHSPF 210
G++ +L+ P+
Sbjct: 194 CGIVLTAMLAGELPW 208
>pdb|4FST|A Chain A, Crystal Structure Of The Chk1
Length = 269
Score = 86.3 bits (212), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 54/195 (27%), Positives = 100/195 (51%), Gaps = 6/195 (3%)
Query: 20 SRGKFASVRKCTHKITKVEYAAKFIRKRRRSMDQMQDILHEAAVLYLAQKSERIVGLHEI 79
G + V+ +++T+ A K + +R++D ++I E + + E +V +
Sbjct: 15 GEGAYGEVQLAVNRVTEEAVAVKIV-DMKRAVDCPENIKKEICINKMLN-HENVVKFYGH 72
Query: 80 YETPHEMVLVLEMVPDGELQRLVDIQDGIPEQDTRSYMKQILEALAFLHDHNITHLDLKP 139
+ L LE GEL ++ G+PE D + + Q++ + +LH ITH D+KP
Sbjct: 73 RREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIGITHRDIKP 132
Query: 140 QNILLTKDNNIKLCDFGIS---RVVNDVVEVKEIIGTPDYVAPEVLSYEPI-SLATDMWS 195
+N+LL + +N+K+ DFG++ R N + ++ GT YVAPE+L + D+WS
Sbjct: 133 ENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPELLKRREFHAEPVDVWS 192
Query: 196 VGVLAYVLLSSHSPF 210
G++ +L+ P+
Sbjct: 193 CGIVLTAMLAGELPW 207
>pdb|4FSN|A Chain A, Crystal Structure Of The Chk1
Length = 278
Score = 86.3 bits (212), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 54/195 (27%), Positives = 100/195 (51%), Gaps = 6/195 (3%)
Query: 20 SRGKFASVRKCTHKITKVEYAAKFIRKRRRSMDQMQDILHEAAVLYLAQKSERIVGLHEI 79
G + V+ +++T+ A K + +R++D ++I E + + E +V +
Sbjct: 14 GEGAYGEVQLAVNRVTEEAVAVKIV-DMKRAVDCPENIKKEICINKMLN-HENVVKFYGH 71
Query: 80 YETPHEMVLVLEMVPDGELQRLVDIQDGIPEQDTRSYMKQILEALAFLHDHNITHLDLKP 139
+ L LE GEL ++ G+PE D + + Q++ + +LH ITH D+KP
Sbjct: 72 RREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIGITHRDIKP 131
Query: 140 QNILLTKDNNIKLCDFGIS---RVVNDVVEVKEIIGTPDYVAPEVLSYEPI-SLATDMWS 195
+N+LL + +N+K+ DFG++ R N + ++ GT YVAPE+L + D+WS
Sbjct: 132 ENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWS 191
Query: 196 VGVLAYVLLSSHSPF 210
G++ +L+ P+
Sbjct: 192 CGIVLTAMLAGELPW 206
>pdb|4FSM|A Chain A, Crystal Structure Of The Chk1
pdb|4FSQ|A Chain A, Crystal Structure Of The Chk1
pdb|4FSR|A Chain A, Crystal Structure Of The Chk1
pdb|4FT0|A Chain A, Crystal Structure Of The Chk1
pdb|4FT5|A Chain A, Crystal Structure Of The Chk1
pdb|4FT7|A Chain A, Crystal Structure Of The Chk1
pdb|4FT9|A Chain A, Crystal Structure Of The Chk1
pdb|4FTI|A Chain A, Crystal Structure Of The Chk1
pdb|4FTJ|A Chain A, Crystal Structure Of The Chk1
pdb|4FTK|A Chain A, Crystal Structure Of The Chk1
pdb|4FTL|A Chain A, Crystal Structure Of The Chk1
pdb|4FTM|A Chain A, Crystal Structure Of The Chk1
pdb|4FTO|A Chain A, Crystal Structure Of The Chk1
pdb|4FTR|A Chain A, Crystal Structure Of The Chk1
pdb|4FTT|A Chain A, Crystal Structure Of The Chk1
pdb|4FTU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 86.3 bits (212), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 54/195 (27%), Positives = 100/195 (51%), Gaps = 6/195 (3%)
Query: 20 SRGKFASVRKCTHKITKVEYAAKFIRKRRRSMDQMQDILHEAAVLYLAQKSERIVGLHEI 79
G + V+ +++T+ A K + +R++D ++I E + + E +V +
Sbjct: 15 GEGAYGEVQLAVNRVTEEAVAVKIV-DMKRAVDCPENIKKEICINKMLN-HENVVKFYGH 72
Query: 80 YETPHEMVLVLEMVPDGELQRLVDIQDGIPEQDTRSYMKQILEALAFLHDHNITHLDLKP 139
+ L LE GEL ++ G+PE D + + Q++ + +LH ITH D+KP
Sbjct: 73 RREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIGITHRDIKP 132
Query: 140 QNILLTKDNNIKLCDFGIS---RVVNDVVEVKEIIGTPDYVAPEVLSYEPI-SLATDMWS 195
+N+LL + +N+K+ DFG++ R N + ++ GT YVAPE+L + D+WS
Sbjct: 133 ENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWS 192
Query: 196 VGVLAYVLLSSHSPF 210
G++ +L+ P+
Sbjct: 193 CGIVLTAMLAGELPW 207
>pdb|4FSW|A Chain A, Crystal Structure Of The Chk1
pdb|4FTA|A Chain A, Crystal Structure Of The Chk1
pdb|4FTC|A Chain A, Crystal Structure Of The Chk1
pdb|4FTN|A Chain A, Crystal Structure Of The Chk1
pdb|4FTQ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 85.9 bits (211), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 54/195 (27%), Positives = 100/195 (51%), Gaps = 6/195 (3%)
Query: 20 SRGKFASVRKCTHKITKVEYAAKFIRKRRRSMDQMQDILHEAAVLYLAQKSERIVGLHEI 79
G + V+ +++T+ A K + +R++D ++I E + + E +V +
Sbjct: 15 GEGAYGEVQLAVNRVTEEAVAVKIV-DMKRAVDCPENIKKEICINKMLN-HENVVKFYGH 72
Query: 80 YETPHEMVLVLEMVPDGELQRLVDIQDGIPEQDTRSYMKQILEALAFLHDHNITHLDLKP 139
+ L LE GEL ++ G+PE D + + Q++ + +LH ITH D+KP
Sbjct: 73 RREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIGITHRDIKP 132
Query: 140 QNILLTKDNNIKLCDFGIS---RVVNDVVEVKEIIGTPDYVAPEVLSYEPI-SLATDMWS 195
+N+LL + +N+K+ DFG++ R N + ++ GT YVAPE+L + D+WS
Sbjct: 133 ENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPELLKRREFHAEPVDVWS 192
Query: 196 VGVLAYVLLSSHSPF 210
G++ +L+ P+
Sbjct: 193 CGIVLTAMLAGELPW 207
>pdb|1OB3|A Chain A, Structure Of P. Falciparum Pfpk5
pdb|1OB3|B Chain B, Structure Of P. Falciparum Pfpk5
pdb|1V0P|A Chain A, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
pdb|1V0P|B Chain B, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
Length = 288
Score = 85.9 bits (211), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 62/207 (29%), Positives = 108/207 (52%), Gaps = 8/207 (3%)
Query: 20 SRGKFASVRKCTHKITKVEYAAKFIRKRRRSMDQMQDILHEAAVLYLAQKSERIVGLHEI 79
G + V K + + +A K IR + + E ++L K IV L+++
Sbjct: 11 GEGTYGVVYKAQNNYGET-FALKKIRLEKEDEGIPSTTIREISILK-ELKHSNIVKLYDV 68
Query: 80 YETPHEMVLVLEMVPDGELQRLVDIQDGIPEQDT-RSYMKQILEALAFLHDHNITHLDLK 138
T +VLV E + D +L++L+D+ +G E T +S++ Q+L +A+ HD + H DLK
Sbjct: 69 IHTKKRLVLVFEHL-DQDLKKLLDVCEGGLESVTAKSFLLQLLNGIAYCHDRRVLHRDLK 127
Query: 139 PQNILLTKDNNIKLCDFGISRVVNDVVE--VKEIIGTPDYVAPEVL-SYEPISLATDMWS 195
PQN+L+ ++ +K+ DFG++R V EI+ T Y AP+VL + S D+WS
Sbjct: 128 PQNLLINREGELKIADFGLARAFGIPVRKYTHEIV-TLWYRAPDVLMGSKKYSTTIDIWS 186
Query: 196 VGVLAYVLLSSHSPFAGDNKQETFLNI 222
VG + +++ F G ++ + + I
Sbjct: 187 VGCIFAEMVNGTPLFPGVSEADQLMRI 213
>pdb|4FSY|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 85.9 bits (211), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 54/195 (27%), Positives = 100/195 (51%), Gaps = 6/195 (3%)
Query: 20 SRGKFASVRKCTHKITKVEYAAKFIRKRRRSMDQMQDILHEAAVLYLAQKSERIVGLHEI 79
G + V+ +++T+ A K + +R++D ++I E + + E +V +
Sbjct: 15 GEGAYGEVQLAVNRVTEEAVAVKIV-DMKRAVDCPENIKKEIXINKMLN-HENVVKFYGH 72
Query: 80 YETPHEMVLVLEMVPDGELQRLVDIQDGIPEQDTRSYMKQILEALAFLHDHNITHLDLKP 139
+ L LE GEL ++ G+PE D + + Q++ + +LH ITH D+KP
Sbjct: 73 RREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIGITHRDIKP 132
Query: 140 QNILLTKDNNIKLCDFGIS---RVVNDVVEVKEIIGTPDYVAPEVLSYEPI-SLATDMWS 195
+N+LL + +N+K+ DFG++ R N + ++ GT YVAPE+L + D+WS
Sbjct: 133 ENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWS 192
Query: 196 VGVLAYVLLSSHSPF 210
G++ +L+ P+
Sbjct: 193 CGIVLTAMLAGELPW 207
>pdb|2YDJ|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
pdb|2YDJ|B Chain B, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 85.5 bits (210), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 54/195 (27%), Positives = 100/195 (51%), Gaps = 6/195 (3%)
Query: 20 SRGKFASVRKCTHKITKVEYAAKFIRKRRRSMDQMQDILHEAAVLYLAQKSERIVGLHEI 79
G + V+ +++T+ A K + +R++D ++I E + + E +V +
Sbjct: 16 GEGAYGEVQLAVNRVTEEAVAVKIV-DMKRAVDCPENIKKEIXINKMLN-HENVVKFYGH 73
Query: 80 YETPHEMVLVLEMVPDGELQRLVDIQDGIPEQDTRSYMKQILEALAFLHDHNITHLDLKP 139
+ L LE GEL ++ G+PE D + + Q++ + +LH ITH D+KP
Sbjct: 74 RREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIGITHRDIKP 133
Query: 140 QNILLTKDNNIKLCDFGIS---RVVNDVVEVKEIIGTPDYVAPEVLSYEPI-SLATDMWS 195
+N+LL + +N+K+ DFG++ R N + ++ GT YVAPE+L + D+WS
Sbjct: 134 ENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPELLKRREFHAEPVDVWS 193
Query: 196 VGVLAYVLLSSHSPF 210
G++ +L+ P+
Sbjct: 194 CGIVLTAMLAGELPW 208
>pdb|3ORN|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4987655 And Mgamp-Pnp
pdb|3OS3|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4858061 And Mgatp
Length = 307
Score = 85.5 bits (210), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 68/245 (27%), Positives = 113/245 (46%), Gaps = 20/245 (8%)
Query: 22 GKFASVRKCTHKITKVEYAAKFIRKRRRSMDQMQDILHEAAVLYLAQKSERIVGLHEIYE 81
G V K +HK + + A K I + + Q I+ E VL+ S IVG + +
Sbjct: 17 GNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQ-IIRELQVLHECN-SPYIVGFYGAFY 74
Query: 82 TPHEMVLVLEMVPDGELQRLVDIQDGIPEQDTRSYMKQILEALAFLHD-HNITHLDLKPQ 140
+ E+ + +E + G L +++ IPEQ +++ L +L + H I H D+KP
Sbjct: 75 SDGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAVIKGLTYLREKHKIMHRDVKPS 134
Query: 141 NILLTKDNNIKLCDFGISRVVNDVVEVKEIIGTPDYVAPEVLSYEPISLATDMWSVGVLA 200
NIL+ IKLCDFG+S + D + +GT Y++PE L S+ +D+WS+G+
Sbjct: 135 NILVNSRGEIKLCDFGVSGQLIDSM-ANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSL 193
Query: 201 YVLLSSHSPFAGDNKQETFLNISQCNFSFHEDL------------FGHISSQAKDFIQSC 248
+ P + +E S+ + E L G S + +DF+ C
Sbjct: 194 VEMAVGRYPIPPPDAKED----SRPPMAIFELLDYIVNEPPPKLPSGVFSLEFQDFVNKC 249
Query: 249 LVTDP 253
L+ +P
Sbjct: 250 LIKNP 254
>pdb|4FSZ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 85.5 bits (210), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 56/199 (28%), Positives = 102/199 (51%), Gaps = 14/199 (7%)
Query: 20 SRGKFASVRKCTHKITKVEYAAKFIRKRRRSMDQMQDILHEAAVLYLAQKSERIVGLHEI 79
G + V+ +++T+ A K + +R++D ++I E + + E +V +
Sbjct: 15 GEGAYGEVQLAVNRVTEEAVAVKIV-DMKRAVDCPENIKKEIXINKMLN-HENVVKFYGH 72
Query: 80 YETPHEMVLVLEMVPDGELQRLVDIQDGIPEQDTRSYMKQILEALAFLHDHNITHLDLKP 139
+ L LE GEL ++ G+PE D + + Q++ + +LH ITH D+KP
Sbjct: 73 RREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIGITHRDIKP 132
Query: 140 QNILLTKDNNIKLCDFGIS---RVVNDVVEVKEIIGTPDYVAPEVLSY-----EPISLAT 191
+N+LL + +N+K+ DFG++ R N + ++ GT YVAPE+L EP+
Sbjct: 133 ENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPELLKRREFHAEPV---- 188
Query: 192 DMWSVGVLAYVLLSSHSPF 210
D+WS G++ +L+ P+
Sbjct: 189 DVWSCGIVLTAMLAGELPW 207
>pdb|3Q52|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain
pdb|3Q53|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain In Complex
With Atp
Length = 306
Score = 85.5 bits (210), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 52/185 (28%), Positives = 96/185 (51%), Gaps = 3/185 (1%)
Query: 69 KSERIVGLHEIYETPHEMVLVLEMVPDGELQRLVDIQDGIPEQDTRSYMKQILEALAFLH 128
K+ IV + Y E+ +V+E + G L +V + + E + ++ L+AL FLH
Sbjct: 76 KNPNIVNYLDSYLVGDELWVVMEYLAGGSLTDVV-TETCMDEGQIAAVCRECLQALEFLH 134
Query: 129 DHNITHLDLKPQNILLTKDNNIKLCDFGI-SRVVNDVVEVKEIIGTPDYVAPEVLSYEPI 187
+ + H D+K NILL D ++KL DFG +++ + + ++GTP ++APEV++ +
Sbjct: 135 SNQVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRSXMVGTPYWMAPEVVTRKAY 194
Query: 188 SLATDMWSVGVLAYVLLSSHSPFAGDNKQETFLNISQCNFSFHEDLFGHISSQAKDFIQS 247
D+WS+G++A ++ P+ +N I+ N + +S+ +DF+
Sbjct: 195 GPKVDIWSLGIMAIEMIEGEPPYLNENPLRALYLIA-TNGTPELQNPEKLSAIFRDFLNR 253
Query: 248 CLVTD 252
CL D
Sbjct: 254 CLEMD 258
>pdb|3FXZ|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Lambda-Fl172
pdb|3FY0|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Dw1
pdb|4DAW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With The Ruthenium
Phthalimide Complex
Length = 297
Score = 85.5 bits (210), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 52/185 (28%), Positives = 96/185 (51%), Gaps = 3/185 (1%)
Query: 69 KSERIVGLHEIYETPHEMVLVLEMVPDGELQRLVDIQDGIPEQDTRSYMKQILEALAFLH 128
K+ IV + Y E+ +V+E + G L +V + + E + ++ L+AL FLH
Sbjct: 75 KNPNIVNYLDSYLVGDELWVVMEYLAGGSLTDVV-TETCMDEGQIAAVCRECLQALEFLH 133
Query: 129 DHNITHLDLKPQNILLTKDNNIKLCDFGI-SRVVNDVVEVKEIIGTPDYVAPEVLSYEPI 187
+ + H D+K NILL D ++KL DFG +++ + + ++GTP ++APEV++ +
Sbjct: 134 SNQVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRSXMVGTPYWMAPEVVTRKAY 193
Query: 188 SLATDMWSVGVLAYVLLSSHSPFAGDNKQETFLNISQCNFSFHEDLFGHISSQAKDFIQS 247
D+WS+G++A ++ P+ +N I+ N + +S+ +DF+
Sbjct: 194 GPKVDIWSLGIMAIEMIEGEPPYLNENPLRALYLIA-TNGTPELQNPEKLSAIFRDFLNR 252
Query: 248 CLVTD 252
CL D
Sbjct: 253 CLEMD 257
>pdb|3CIK|A Chain A, Human Grk2 In Complex With Gbetagamma Subunits
pdb|3V5W|A Chain A, Human G Protein-Coupled Receptor Kinase 2 In Complex With
Soluble Gbetagamma Subunits And Paroxetine
Length = 689
Score = 85.5 bits (210), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 61/200 (30%), Positives = 101/200 (50%), Gaps = 15/200 (7%)
Query: 20 SRGKFASVRKCTHKITKVEYAAKFIRKRRRSMDQMQDI-LHEAAVLYLAQKSE--RIVGL 76
RG F V C T YA K + K+R M Q + + L+E +L L + IV +
Sbjct: 198 GRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCM 257
Query: 77 HEIYETPHEMVLVLEMVPDGELQRLVDIQDGIPEQDTRSYMKQILEALAFLHDHNITHLD 136
+ TP ++ +L+++ G+L + E D R Y +I+ L +H+ + + D
Sbjct: 258 SYAFHTPDKLSFILDLMNGGDLHYHLSQHGVFSEADMRFYAAEIILGLEHMHNRFVVYRD 317
Query: 137 LKPQNILLTKDNNIKLCDFGISRVVNDVVEVK--EIIGTPDYVAPEVL----SYEPISLA 190
LKP NILL + ++++ D G++ D + K +GT Y+APEVL +Y+ +
Sbjct: 318 LKPANILLDEHGHVRISDLGLA---CDFSKKKPHASVGTHGYMAPEVLQKGVAYDS---S 371
Query: 191 TDMWSVGVLAYVLLSSHSPF 210
D +S+G + + LL HSPF
Sbjct: 372 ADWFSLGCMLFKLLRGHSPF 391
>pdb|3KRW|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol
(Soak)
pdb|3KRX|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol
(Co-Crystal)
Length = 688
Score = 85.5 bits (210), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 61/200 (30%), Positives = 101/200 (50%), Gaps = 15/200 (7%)
Query: 20 SRGKFASVRKCTHKITKVEYAAKFIRKRRRSMDQMQDI-LHEAAVLYLAQKSE--RIVGL 76
RG F V C T YA K + K+R M Q + + L+E +L L + IV +
Sbjct: 197 GRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCM 256
Query: 77 HEIYETPHEMVLVLEMVPDGELQRLVDIQDGIPEQDTRSYMKQILEALAFLHDHNITHLD 136
+ TP ++ +L+++ G+L + E D R Y +I+ L +H+ + + D
Sbjct: 257 SYAFHTPDKLSFILDLMNGGDLHYHLSQHGVFSEADMRFYAAEIILGLEHMHNRFVVYRD 316
Query: 137 LKPQNILLTKDNNIKLCDFGISRVVNDVVEVK--EIIGTPDYVAPEVL----SYEPISLA 190
LKP NILL + ++++ D G++ D + K +GT Y+APEVL +Y+ +
Sbjct: 317 LKPANILLDEHGHVRISDLGLA---CDFSKKKPHASVGTHGYMAPEVLQKGVAYDS---S 370
Query: 191 TDMWSVGVLAYVLLSSHSPF 210
D +S+G + + LL HSPF
Sbjct: 371 ADWFSLGCMLFKLLRGHSPF 390
>pdb|1V0B|A Chain A, Crystal Structure Of The T198a Mutant Of Pfpk5
pdb|1V0B|B Chain B, Crystal Structure Of The T198a Mutant Of Pfpk5
Length = 288
Score = 85.5 bits (210), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 61/207 (29%), Positives = 108/207 (52%), Gaps = 8/207 (3%)
Query: 20 SRGKFASVRKCTHKITKVEYAAKFIRKRRRSMDQMQDILHEAAVLYLAQKSERIVGLHEI 79
G + V K + + +A K IR + + E ++L K IV L+++
Sbjct: 11 GEGTYGVVYKAQNNYGET-FALKKIRLEKEDEGIPSTTIREISILK-ELKHSNIVKLYDV 68
Query: 80 YETPHEMVLVLEMVPDGELQRLVDIQDGIPEQDT-RSYMKQILEALAFLHDHNITHLDLK 138
T +VLV E + D +L++L+D+ +G E T +S++ Q+L +A+ HD + H DLK
Sbjct: 69 IHTKKRLVLVFEHL-DQDLKKLLDVCEGGLESVTAKSFLLQLLNGIAYCHDRRVLHRDLK 127
Query: 139 PQNILLTKDNNIKLCDFGISRVVNDVVE--VKEIIGTPDYVAPEVL-SYEPISLATDMWS 195
PQN+L+ ++ +K+ DFG++R V E++ T Y AP+VL + S D+WS
Sbjct: 128 PQNLLINREGELKIADFGLARAFGIPVRKYTHEVV-TLWYRAPDVLMGSKKYSTTIDIWS 186
Query: 196 VGVLAYVLLSSHSPFAGDNKQETFLNI 222
VG + +++ F G ++ + + I
Sbjct: 187 VGCIFAEMVNGAPLFPGVSEADQLMRI 213
>pdb|1OMW|A Chain A, Crystal Structure Of The Complex Between G Protein-Coupled
Receptor Kinase 2 And Heterotrimeric G Protein Beta 1
And Gamma 2 Subunits
pdb|1YM7|A Chain A, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|B Chain B, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|C Chain C, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|D Chain D, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|2BCJ|A Chain A, Crystal Structure Of G Protein-coupled Receptor Kinase 2
In Complex With Galpha-q And Gbetagamma Subunits
pdb|3UZS|A Chain A, Structure Of The C13.28 Rna Aptamer Bound To The G
Protein-Coupled Receptor Kinase 2-Heterotrimeric G
Protein Beta 1 And Gamma 2 Subunit Complex
pdb|3UZT|A Chain A, Structure Of The C13.18 Rna Aptamer In Complex With G
Protein-Coupled Receptor Kinase 2
Length = 689
Score = 85.1 bits (209), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 61/200 (30%), Positives = 101/200 (50%), Gaps = 15/200 (7%)
Query: 20 SRGKFASVRKCTHKITKVEYAAKFIRKRRRSMDQMQDI-LHEAAVLYLAQKSE--RIVGL 76
RG F V C T YA K + K+R M Q + + L+E +L L + IV +
Sbjct: 198 GRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCM 257
Query: 77 HEIYETPHEMVLVLEMVPDGELQRLVDIQDGIPEQDTRSYMKQILEALAFLHDHNITHLD 136
+ TP ++ +L+++ G+L + E D R Y +I+ L +H+ + + D
Sbjct: 258 SYAFHTPDKLSFILDLMNGGDLHYHLSQHGVFSEADMRFYAAEIILGLEHMHNRFVVYRD 317
Query: 137 LKPQNILLTKDNNIKLCDFGISRVVNDVVEVK--EIIGTPDYVAPEVL----SYEPISLA 190
LKP NILL + ++++ D G++ D + K +GT Y+APEVL +Y+ +
Sbjct: 318 LKPANILLDEHGHVRISDLGLA---CDFSKKKPHASVGTHGYMAPEVLQKGVAYDS---S 371
Query: 191 TDMWSVGVLAYVLLSSHSPF 210
D +S+G + + LL HSPF
Sbjct: 372 ADWFSLGCMLFKLLRGHSPF 391
>pdb|3PSC|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits
pdb|3PVU|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits And A
Selective Kinase Inhibitor (Cmpd101)
pdb|3PVW|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits And A
Selective Kinase Inhibitor (Cmpd103a)
Length = 695
Score = 85.1 bits (209), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 61/200 (30%), Positives = 101/200 (50%), Gaps = 15/200 (7%)
Query: 20 SRGKFASVRKCTHKITKVEYAAKFIRKRRRSMDQMQDI-LHEAAVLYLAQKSE--RIVGL 76
RG F V C T YA K + K+R M Q + + L+E +L L + IV +
Sbjct: 198 GRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCM 257
Query: 77 HEIYETPHEMVLVLEMVPDGELQRLVDIQDGIPEQDTRSYMKQILEALAFLHDHNITHLD 136
+ TP ++ +L+++ G+L + E D R Y +I+ L +H+ + + D
Sbjct: 258 SYAFHTPDKLSFILDLMNGGDLHYHLSQHGVFSEADMRFYAAEIILGLEHMHNRFVVYRD 317
Query: 137 LKPQNILLTKDNNIKLCDFGISRVVNDVVEVK--EIIGTPDYVAPEVL----SYEPISLA 190
LKP NILL + ++++ D G++ D + K +GT Y+APEVL +Y+ +
Sbjct: 318 LKPANILLDEHGHVRISDLGLA---CDFSKKKPHASVGTHGYMAPEVLQKGVAYDS---S 371
Query: 191 TDMWSVGVLAYVLLSSHSPF 210
D +S+G + + LL HSPF
Sbjct: 372 ADWFSLGCMLFKLLRGHSPF 391
>pdb|1V0O|A Chain A, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
pdb|1V0O|B Chain B, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
Length = 288
Score = 85.1 bits (209), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 61/207 (29%), Positives = 108/207 (52%), Gaps = 8/207 (3%)
Query: 20 SRGKFASVRKCTHKITKVEYAAKFIRKRRRSMDQMQDILHEAAVLYLAQKSERIVGLHEI 79
G + V K + + +A K IR + + E ++L K IV L+++
Sbjct: 11 GEGTYGVVYKAQNNYGET-FALKKIRLEKEDEGIPSTTIREISILK-ELKHSNIVKLYDV 68
Query: 80 YETPHEMVLVLEMVPDGELQRLVDIQDGIPEQDT-RSYMKQILEALAFLHDHNITHLDLK 138
T +VLV E + D +L++L+D+ +G E T +S++ Q+L +A+ HD + H DLK
Sbjct: 69 IHTKKRLVLVFEHL-DQDLKKLLDVCEGGLESVTAKSFLLQLLNGIAYCHDRRVLHRDLK 127
Query: 139 PQNILLTKDNNIKLCDFGISRVVNDVVE--VKEIIGTPDYVAPEVL-SYEPISLATDMWS 195
PQN+L+ ++ +K+ DFG++R V E++ T Y AP+VL + S D+WS
Sbjct: 128 PQNLLINREGELKIADFGLARAFGIPVRKYTHEVV-TLWYRAPDVLMGSKKYSTTIDIWS 186
Query: 196 VGVLAYVLLSSHSPFAGDNKQETFLNI 222
VG + +++ F G ++ + + I
Sbjct: 187 VGCIFAEMVNGTPLFPGVSEADQLMRI 213
>pdb|1F3M|C Chain C, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1F3M|D Chain D, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1YHW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With One Point
Mutations (K299r)
Length = 297
Score = 85.1 bits (209), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 52/185 (28%), Positives = 96/185 (51%), Gaps = 3/185 (1%)
Query: 69 KSERIVGLHEIYETPHEMVLVLEMVPDGELQRLVDIQDGIPEQDTRSYMKQILEALAFLH 128
K+ IV + Y E+ +V+E + G L +V + + E + ++ L+AL FLH
Sbjct: 75 KNPNIVNYLDSYLVGDELWVVMEYLAGGSLTDVV-TETCMDEGQIAAVCRECLQALEFLH 133
Query: 129 DHNITHLDLKPQNILLTKDNNIKLCDFGI-SRVVNDVVEVKEIIGTPDYVAPEVLSYEPI 187
+ + H D+K NILL D ++KL DFG +++ + + ++GTP ++APEV++ +
Sbjct: 134 SNQVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRSTMVGTPYWMAPEVVTRKAY 193
Query: 188 SLATDMWSVGVLAYVLLSSHSPFAGDNKQETFLNISQCNFSFHEDLFGHISSQAKDFIQS 247
D+WS+G++A ++ P+ +N I+ N + +S+ +DF+
Sbjct: 194 GPKVDIWSLGIMAIEMIEGEPPYLNENPLRALYLIA-TNGTPELQNPEKLSAIFRDFLNR 252
Query: 248 CLVTD 252
CL D
Sbjct: 253 CLDMD 257
>pdb|4FR4|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|C Chain C, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|D Chain D, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|E Chain E, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|F Chain F, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
Length = 384
Score = 85.1 bits (209), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 51/195 (26%), Positives = 101/195 (51%), Gaps = 5/195 (2%)
Query: 20 SRGKFASVRKCTHKITKVEYAAKFIRKRR-RSMDQMQDILHEAAVLYLAQKSERIVGLHE 78
+G F V TK YA K++ K++ ++++++ E ++ + +V L
Sbjct: 24 GKGSFGKVCIVQKNDTKKMYAMKYMNKQKCVERNEVRNVFKELQIMQ-GLEHPFLVNLWY 82
Query: 79 IYETPHEMVLVLEMVPDGELQRLVDIQDGIPEQDTRSYMKQILEALAFLHDHNITHLDLK 138
++ +M +V++++ G+L+ + E+ + ++ +++ AL +L + I H D+K
Sbjct: 83 SFQDEEDMFMVVDLLLGGDLRYHLQQNVHFKEETVKLFICELVMALDYLQNQRIIHRDMK 142
Query: 139 PQNILLTKDNNIKLCDFGISRVVNDVVEVKEIIGTPDYVAPEVLSYEP---ISLATDMWS 195
P NILL + ++ + DF I+ ++ ++ + GT Y+APE+ S S A D WS
Sbjct: 143 PDNILLDEHGHVHITDFNIAAMLPRETQITTMAGTKPYMAPEMFSSRKGAGYSFAVDWWS 202
Query: 196 VGVLAYVLLSSHSPF 210
+GV AY LL P+
Sbjct: 203 LGVTAYELLRGRRPY 217
>pdb|2PK9|A Chain A, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PK9|C Chain C, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PMI|A Chain A, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
pdb|2PMI|C Chain C, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
Length = 317
Score = 84.7 bits (208), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 67/230 (29%), Positives = 113/230 (49%), Gaps = 13/230 (5%)
Query: 22 GKFASVRKCTHKITKVEYAAKFIRKRRRSMDQMQDILHEAAVLYLAQKSERIVGLHEIYE 81
G +A+V K +K T V A K ++ I + + L K E IV L+++
Sbjct: 16 GTYATVYKGLNKTTGVYVALKEVKLDSEEGTPSTAIREISLMKEL--KHENIVRLYDVIH 73
Query: 82 TPHEMVLVLEMVPDGELQRLVDIQD------GIPEQDTRSYMKQILEALAFLHDHNITHL 135
T +++ LV E + D +L++ +D + G+ + + Q+L+ LAF H++ I H
Sbjct: 74 TENKLTLVFEFM-DNDLKKYMDSRTVGNTPRGLELNLVKYFQWQLLQGLAFCHENKILHR 132
Query: 136 DLKPQNILLTKDNNIKLCDFGISRVVNDVVEV--KEIIGTPDYVAPEVL-SYEPISLATD 192
DLKPQN+L+ K +KL DFG++R V E++ T Y AP+VL S + D
Sbjct: 133 DLKPQNLLINKRGQLKLGDFGLARAFGIPVNTFSSEVV-TLWYRAPDVLMGSRTYSTSID 191
Query: 193 MWSVGVLAYVLLSSHSPFAGDNKQETFLNISQCNFSFHEDLFGHISSQAK 242
+WS G + +++ F G N +E I + +E L+ ++ K
Sbjct: 192 IWSCGCILAEMITGKPLFPGTNDEEQLKLIFDIMGTPNESLWPSVTKLPK 241
>pdb|4AN2|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN3|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN9|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4ANB|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs
Length = 301
Score = 84.3 bits (207), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 57/178 (32%), Positives = 92/178 (51%), Gaps = 4/178 (2%)
Query: 22 GKFASVRKCTHKITKVEYAAKFIRKRRRSMDQMQDILHEAAVLYLAQKSERIVGLHEIYE 81
G V K +HK + + A K I + + Q I+ E VL+ S IVG + +
Sbjct: 20 GNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQ-IIRELQVLHECN-SPYIVGFYGAFY 77
Query: 82 TPHEMVLVLEMVPDGELQRLVDIQDGIPEQDTRSYMKQILEALAFLHD-HNITHLDLKPQ 140
+ E+ + +E + G L +++ IPEQ +++ L +L + H I H D+KP
Sbjct: 78 SDGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAVIKGLTYLREKHKIMHRDVKPS 137
Query: 141 NILLTKDNNIKLCDFGISRVVNDVVEVKEIIGTPDYVAPEVLSYEPISLATDMWSVGV 198
NIL+ IKLCDFG+S + D + E +GT Y++PE L S+ +D+WS+G+
Sbjct: 138 NILVNSRGEIKLCDFGVSGQLIDEM-ANEFVGTRSYMSPERLQGTHYSVQSDIWSMGL 194
>pdb|4FSU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 84.3 bits (207), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 56/199 (28%), Positives = 101/199 (50%), Gaps = 14/199 (7%)
Query: 20 SRGKFASVRKCTHKITKVEYAAKFIRKRRRSMDQMQDILHEAAVLYLAQKSERIVGLHEI 79
G V+ +++T+ A K + +R++D ++I E + + E +V +
Sbjct: 15 GEGAAGEVQLAVNRVTEEAVAVKIV-DMKRAVDCPENIKKEICINKMLN-HENVVKFYGH 72
Query: 80 YETPHEMVLVLEMVPDGELQRLVDIQDGIPEQDTRSYMKQILEALAFLHDHNITHLDLKP 139
+ L LE GEL ++ G+PE D + + Q++ + +LH ITH D+KP
Sbjct: 73 RREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIGITHRDIKP 132
Query: 140 QNILLTKDNNIKLCDFGIS---RVVNDVVEVKEIIGTPDYVAPEVLSY-----EPISLAT 191
+N+LL + +N+K+ DFG++ R N + ++ GT YVAPE+L EP+
Sbjct: 133 ENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPV---- 188
Query: 192 DMWSVGVLAYVLLSSHSPF 210
D+WS G++ +L+ P+
Sbjct: 189 DVWSCGIVLTAMLAGELPW 207
>pdb|2W99|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
pdb|2W9Z|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 84.3 bits (207), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 48/140 (34%), Positives = 76/140 (54%), Gaps = 3/140 (2%)
Query: 85 EMVLVLEMVPDGELQRLVD--IQDGIPEQDTRSYMKQILEALAFLHDHNITHLDLKPQNI 142
++ LV E V D +L+ +D G+P + + M+Q L L FLH + I H DLKP+NI
Sbjct: 85 KVTLVFEHV-DQDLRTYLDKAPPPGLPAETIKDLMRQFLRGLDFLHANCIVHRDLKPENI 143
Query: 143 LLTKDNNIKLCDFGISRVVNDVVEVKEIIGTPDYVAPEVLSYEPISLATDMWSVGVLAYV 202
L+T +KL DFG++R+ + + + ++ T Y APEVL + DMWSVG +
Sbjct: 144 LVTSGGTVKLADFGLARIYSYQMALAPVVVTLWYRAPEVLLQSTYATPVDMWSVGCIFAE 203
Query: 203 LLSSHSPFAGDNKQETFLNI 222
+ F G+++ + I
Sbjct: 204 MFRRKPLFCGNSEADQLGKI 223
>pdb|3G33|A Chain A, Crystal Structure Of Cdk4CYCLIN D3
pdb|3G33|C Chain C, Crystal Structure Of Cdk4CYCLIN D3
Length = 308
Score = 84.0 bits (206), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 48/140 (34%), Positives = 76/140 (54%), Gaps = 3/140 (2%)
Query: 85 EMVLVLEMVPDGELQRLVD--IQDGIPEQDTRSYMKQILEALAFLHDHNITHLDLKPQNI 142
++ LV E V D +L+ +D G+P + + M+Q L L FLH + I H DLKP+NI
Sbjct: 93 KVTLVFEHV-DQDLRTYLDKAPPPGLPAETIKDLMRQFLRGLDFLHANCIVHRDLKPENI 151
Query: 143 LLTKDNNIKLCDFGISRVVNDVVEVKEIIGTPDYVAPEVLSYEPISLATDMWSVGVLAYV 202
L+T +KL DFG++R+ + + + ++ T Y APEVL + DMWSVG +
Sbjct: 152 LVTSGGTVKLADFGLARIYSYQMALTPVVVTLWYRAPEVLLQSTYATPVDMWSVGCIFAE 211
Query: 203 LLSSHSPFAGDNKQETFLNI 222
+ F G+++ + I
Sbjct: 212 MFRRKPLFCGNSEADQLGKI 231
>pdb|2W96|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 84.0 bits (206), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 48/140 (34%), Positives = 76/140 (54%), Gaps = 3/140 (2%)
Query: 85 EMVLVLEMVPDGELQRLVD--IQDGIPEQDTRSYMKQILEALAFLHDHNITHLDLKPQNI 142
++ LV E V D +L+ +D G+P + + M+Q L L FLH + I H DLKP+NI
Sbjct: 85 KVTLVFEHV-DQDLRTYLDKAPPPGLPAETIKDLMRQFLRGLDFLHANCIVHRDLKPENI 143
Query: 143 LLTKDNNIKLCDFGISRVVNDVVEVKEIIGTPDYVAPEVLSYEPISLATDMWSVGVLAYV 202
L+T +KL DFG++R+ + + + ++ T Y APEVL + DMWSVG +
Sbjct: 144 LVTSGGTVKLADFGLARIYSYQMALDPVVVTLWYRAPEVLLQSTYATPVDMWSVGCIFAE 203
Query: 203 LLSSHSPFAGDNKQETFLNI 222
+ F G+++ + I
Sbjct: 204 MFRRKPLFCGNSEADQLGKI 223
>pdb|3Q4Z|A Chain A, Structure Of Unphosphorylated Pak1 Kinase Domain
pdb|3Q4Z|B Chain B, Structure Of Unphosphorylated Pak1 Kinase Domain
Length = 306
Score = 84.0 bits (206), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 51/185 (27%), Positives = 96/185 (51%), Gaps = 3/185 (1%)
Query: 69 KSERIVGLHEIYETPHEMVLVLEMVPDGELQRLVDIQDGIPEQDTRSYMKQILEALAFLH 128
K+ IV + Y E+ +V+E + G L +V + + E + ++ L+AL FLH
Sbjct: 76 KNPNIVNYLDSYLVGDELWVVMEYLAGGSLTDVV-TETCMDEGQIAAVCRECLQALEFLH 134
Query: 129 DHNITHLDLKPQNILLTKDNNIKLCDFGI-SRVVNDVVEVKEIIGTPDYVAPEVLSYEPI 187
+ + H ++K NILL D ++KL DFG +++ + + ++GTP ++APEV++ +
Sbjct: 135 SNQVIHRNIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRSTMVGTPYWMAPEVVTRKAY 194
Query: 188 SLATDMWSVGVLAYVLLSSHSPFAGDNKQETFLNISQCNFSFHEDLFGHISSQAKDFIQS 247
D+WS+G++A ++ P+ +N I+ N + +S+ +DF+
Sbjct: 195 GPKVDIWSLGIMAIEMIEGEPPYLNENPLRALYLIA-TNGTPELQNPEKLSAIFRDFLNR 253
Query: 248 CLVTD 252
CL D
Sbjct: 254 CLEMD 258
>pdb|4AGU|A Chain A, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|B Chain B, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|C Chain C, Crystal Structure Of The Human Cdkl1 Kinase Domain
Length = 311
Score = 83.6 bits (205), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 63/200 (31%), Positives = 95/200 (47%), Gaps = 13/200 (6%)
Query: 20 SRGKFASVRKCTHKITKVEYAAKFIRKRRRSMDQ--MQDILHEAAVLYLAQKSERIVGLH 77
G + V KC ++ T A I+K S D ++ I + K +V L
Sbjct: 12 GEGSYGVVFKCRNRDTGQIVA---IKKFLESEDDPVIKKIALREIRMLKQLKHPNLVNLL 68
Query: 78 EIYETPHEMVLVLEMVPDGELQRLVDIQDGIPEQDTRSYMKQILEALAFLHDHNITHLDL 137
E++ + LV E L L Q G+PE +S Q L+A+ F H HN H D+
Sbjct: 69 EVFRRKRRLHLVFEYCDHTVLHELDRYQRGVPEHLVKSITWQTLQAVNFCHKHNCIHRDV 128
Query: 138 KPQNILLTKDNNIKLCDFGISRVVNDVVE-VKEIIGTPDYVAPEVL----SYEPISLATD 192
KP+NIL+TK + IKLCDFG +R++ + + + T Y +PE+L Y P D
Sbjct: 129 KPENILITKHSVIKLCDFGFARLLTGPSDYYDDEVATRWYRSPELLVGDTQYGP---PVD 185
Query: 193 MWSVGVLAYVLLSSHSPFAG 212
+W++G + LLS + G
Sbjct: 186 VWAIGCVFAELLSGVPLWPG 205
>pdb|2W9F|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 83.2 bits (204), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 48/140 (34%), Positives = 76/140 (54%), Gaps = 3/140 (2%)
Query: 85 EMVLVLEMVPDGELQRLVD--IQDGIPEQDTRSYMKQILEALAFLHDHNITHLDLKPQNI 142
++ LV E V D +L+ +D G+P + + M+Q L L FLH + I H DLKP+NI
Sbjct: 85 KVTLVFEHV-DQDLRTYLDKAPPPGLPAETIKDLMRQFLRGLDFLHANCIVHRDLKPENI 143
Query: 143 LLTKDNNIKLCDFGISRVVNDVVEVKEIIGTPDYVAPEVLSYEPISLATDMWSVGVLAYV 202
L+T +KL DFG++R+ + + + ++ T Y APEVL + DMWSVG +
Sbjct: 144 LVTSGGTVKLADFGLARIYSYQMALFPVVVTLWYRAPEVLLQSTYATPVDMWSVGCIFAE 203
Query: 203 LLSSHSPFAGDNKQETFLNI 222
+ F G+++ + I
Sbjct: 204 MFRRKPLFCGNSEADQLGKI 223
>pdb|1S9I|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
pdb|1S9I|B Chain B, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
Length = 354
Score = 82.8 bits (203), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 60/197 (30%), Positives = 95/197 (48%), Gaps = 4/197 (2%)
Query: 22 GKFASVRKCTHKITKVEYAAKFIRKRRRSMDQMQDILHEAAVLYLAQKSERIVGLHEIYE 81
G V K H+ + + A K I + + Q I+ E VL+ S IVG + +
Sbjct: 27 GNGGVVTKVQHRPSGLIMARKLIHLEIKPAIRNQ-IIRELQVLHECN-SPYIVGFYGAFY 84
Query: 82 TPHEMVLVLEMVPDGELQRLVDIQDGIPEQDTRSYMKQILEALAFLHD-HNITHLDLKPQ 140
+ E+ + +E + G L +++ IPE+ +L LA+L + H I H D+KP
Sbjct: 85 SDGEISICMEHMDGGSLDQVLKEAKRIPEEILGKVSIAVLRGLAYLREKHQIMHRDVKPS 144
Query: 141 NILLTKDNNIKLCDFGISRVVNDVVEVKEIIGTPDYVAPEVLSYEPISLATDMWSVGVLA 200
NIL+ IKLCDFG+S + D + +GT Y+APE L S+ +D+WS+G+
Sbjct: 145 NILVNSRGEIKLCDFGVSGQLIDSM-ANSFVGTRSYMAPERLQGTHYSVQSDIWSMGLSL 203
Query: 201 YVLLSSHSPFAGDNKQE 217
L P + +E
Sbjct: 204 VELAVGRYPIPPPDAKE 220
>pdb|3HKO|A Chain A, Crystal Structure Of A Cdpk Kinase Domain From
Cryptosporidium Parvum, Cgd7_40
Length = 345
Score = 82.8 bits (203), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 75/284 (26%), Positives = 115/284 (40%), Gaps = 57/284 (20%)
Query: 20 SRGKFASVRKCTHKITKVEYAAKFIRKRRRSMDQMQDILHEAAVLYLAQK--SERIVGLH 77
+G + VR T+ A K + K + +D+ + L +K I L+
Sbjct: 35 GQGSYGVVRVAIENQTRAIRAIKIMNKNKIRQINPKDVERIKTEVRLMKKLHHPNIARLY 94
Query: 78 EIYETPHEMVLVLEMVPDG----ELQRLVDIQDG-------------IPEQDTRSY---- 116
E+YE + LV+E+ G +L +D G PE + +
Sbjct: 95 EVYEDEQYICLVMELCHGGHLLDKLNVFIDDSTGKCAMDVVKTQICPCPECNEEAINGSI 154
Query: 117 -------------------MKQILEALAFLHDHNITHLDLKPQNILLTKDNN--IKLCDF 155
M+QI AL +LH+ I H D+KP+N L + + + IKL DF
Sbjct: 155 HGFRESLDFVQREKLISNIMRQIFSALHYLHNQGICHRDIKPENFLFSTNKSFEIKLVDF 214
Query: 156 GISRVV-----NDVVEVKEIIGTPDYVAPEVL-----SYEPISLATDMWSVGVLAYVLLS 205
G+S+ + + GTP +VAPEVL SY P D WS GVL ++LL
Sbjct: 215 GLSKEFYKLNNGEYYGMTTKAGTPYFVAPEVLNTTNESYGP---KCDAWSAGVLLHLLLM 271
Query: 206 SHSPFAGDNKQETFLNISQCNFSFHEDLFGHISSQAKDFIQSCL 249
PF G N +T + F + +S A+D + + L
Sbjct: 272 GAVPFPGVNDADTISQVLNKKLCFENPNYNVLSPLARDLLSNLL 315
>pdb|3MBL|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgadp
pdb|3PP1|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgatp
Length = 328
Score = 82.8 bits (203), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 56/178 (31%), Positives = 91/178 (51%), Gaps = 4/178 (2%)
Query: 22 GKFASVRKCTHKITKVEYAAKFIRKRRRSMDQMQDILHEAAVLYLAQKSERIVGLHEIYE 81
G V K +HK + + A K I + + Q I+ E VL+ S IVG + +
Sbjct: 17 GNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQ-IIRELQVLHECN-SPYIVGFYGAFY 74
Query: 82 TPHEMVLVLEMVPDGELQRLVDIQDGIPEQDTRSYMKQILEALAFLHD-HNITHLDLKPQ 140
+ E+ + +E + G L +++ IPEQ +++ L +L + H I H D+KP
Sbjct: 75 SDGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAVIKGLTYLREKHKIMHRDVKPS 134
Query: 141 NILLTKDNNIKLCDFGISRVVNDVVEVKEIIGTPDYVAPEVLSYEPISLATDMWSVGV 198
NIL+ IKLCDFG+S + D + +GT Y++PE L S+ +D+WS+G+
Sbjct: 135 NILVNSRGEIKLCDFGVSGQLIDSM-ANSFVGTRSYMSPERLQGTHYSVQSDIWSMGL 191
>pdb|3DV3|A Chain A, Mek1 With Pf-04622664 Bound
Length = 322
Score = 82.8 bits (203), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 56/178 (31%), Positives = 91/178 (51%), Gaps = 4/178 (2%)
Query: 22 GKFASVRKCTHKITKVEYAAKFIRKRRRSMDQMQDILHEAAVLYLAQKSERIVGLHEIYE 81
G V K +HK + + A K I + + Q I+ E VL+ S IVG + +
Sbjct: 17 GNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQ-IIRELQVLHECN-SPYIVGFYGAFY 74
Query: 82 TPHEMVLVLEMVPDGELQRLVDIQDGIPEQDTRSYMKQILEALAFLHD-HNITHLDLKPQ 140
+ E+ + +E + G L +++ IPEQ +++ L +L + H I H D+KP
Sbjct: 75 SDGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAVIKGLTYLREKHKIMHRDVKPS 134
Query: 141 NILLTKDNNIKLCDFGISRVVNDVVEVKEIIGTPDYVAPEVLSYEPISLATDMWSVGV 198
NIL+ IKLCDFG+S + D + +GT Y++PE L S+ +D+WS+G+
Sbjct: 135 NILVNSRGEIKLCDFGVSGQLIDSM-ANSFVGTRSYMSPERLQGTHYSVQSDIWSMGL 191
>pdb|1S9J|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3DY7|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3E8N|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) Complexed With A Potent Inhibitor
Rdea119 And Mgatp
pdb|3V01|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions.
pdb|3V04|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions
Length = 341
Score = 82.8 bits (203), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 56/178 (31%), Positives = 91/178 (51%), Gaps = 4/178 (2%)
Query: 22 GKFASVRKCTHKITKVEYAAKFIRKRRRSMDQMQDILHEAAVLYLAQKSERIVGLHEIYE 81
G V K +HK + + A K I + + Q I+ E VL+ S IVG + +
Sbjct: 17 GNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQ-IIRELQVLHECN-SPYIVGFYGAFY 74
Query: 82 TPHEMVLVLEMVPDGELQRLVDIQDGIPEQDTRSYMKQILEALAFLHD-HNITHLDLKPQ 140
+ E+ + +E + G L +++ IPEQ +++ L +L + H I H D+KP
Sbjct: 75 SDGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAVIKGLTYLREKHKIMHRDVKPS 134
Query: 141 NILLTKDNNIKLCDFGISRVVNDVVEVKEIIGTPDYVAPEVLSYEPISLATDMWSVGV 198
NIL+ IKLCDFG+S + D + +GT Y++PE L S+ +D+WS+G+
Sbjct: 135 NILVNSRGEIKLCDFGVSGQLIDSM-ANSFVGTRSYMSPERLQGTHYSVQSDIWSMGL 191
>pdb|2P55|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3EQB|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
Length = 333
Score = 82.8 bits (203), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 56/178 (31%), Positives = 91/178 (51%), Gaps = 4/178 (2%)
Query: 22 GKFASVRKCTHKITKVEYAAKFIRKRRRSMDQMQDILHEAAVLYLAQKSERIVGLHEIYE 81
G V K +HK + + A K I + + Q I+ E VL+ S IVG + +
Sbjct: 17 GNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQ-IIRELQVLHECN-SPYIVGFYGAFY 74
Query: 82 TPHEMVLVLEMVPDGELQRLVDIQDGIPEQDTRSYMKQILEALAFLHD-HNITHLDLKPQ 140
+ E+ + +E + G L +++ IPEQ +++ L +L + H I H D+KP
Sbjct: 75 SDGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAVIKGLTYLREKHKIMHRDVKPS 134
Query: 141 NILLTKDNNIKLCDFGISRVVNDVVEVKEIIGTPDYVAPEVLSYEPISLATDMWSVGV 198
NIL+ IKLCDFG+S + D + +GT Y++PE L S+ +D+WS+G+
Sbjct: 135 NILVNSRGEIKLCDFGVSGQLIDSM-ANSFVGTRSYMSPERLQGTHYSVQSDIWSMGL 191
>pdb|3EQC|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With
Compound 1, Atp-Gs And Mg2p
pdb|3EQD|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Atp-Gs
And Mg2p
pdb|3EQF|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With K252a
And Mg2p
pdb|3EQG|A Chain A, X-ray Structure Of The Human Mitogen-activated Protein
Kinase Kinase 1 (mek1) In A Ternary Complex With Pd, Adp
And Mg2p
pdb|3EQH|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With U0126,
Adp And Mg2p
pdb|3EQI|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Adp And
Mg2p
Length = 360
Score = 82.0 bits (201), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 56/178 (31%), Positives = 91/178 (51%), Gaps = 4/178 (2%)
Query: 22 GKFASVRKCTHKITKVEYAAKFIRKRRRSMDQMQDILHEAAVLYLAQKSERIVGLHEIYE 81
G V K +HK + + A K I + + Q I+ E VL+ S IVG + +
Sbjct: 44 GNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQ-IIRELQVLHECN-SPYIVGFYGAFY 101
Query: 82 TPHEMVLVLEMVPDGELQRLVDIQDGIPEQDTRSYMKQILEALAFLHD-HNITHLDLKPQ 140
+ E+ + +E + G L +++ IPEQ +++ L +L + H I H D+KP
Sbjct: 102 SDGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAVIKGLTYLREKHKIMHRDVKPS 161
Query: 141 NILLTKDNNIKLCDFGISRVVNDVVEVKEIIGTPDYVAPEVLSYEPISLATDMWSVGV 198
NIL+ IKLCDFG+S + D + +GT Y++PE L S+ +D+WS+G+
Sbjct: 162 NILVNSRGEIKLCDFGVSGQLIDSM-ANSFVGTRSYMSPERLQGTHYSVQSDIWSMGL 218
>pdb|4H3Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 82.0 bits (201), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 71/253 (28%), Positives = 124/253 (49%), Gaps = 15/253 (5%)
Query: 5 FFVNGGYQTLIFCMPSRGKFASVRKCTHKITKVEYAAKFIRKRRRSMDQMQDILHEAAVL 64
F V Y L + G + V + KV A K I Q L E +L
Sbjct: 21 FDVGPRYTNLSYI--GEGAYGMVCSAYDNVNKVRVAIKKISPFEHQT-YCQRTLREIKIL 77
Query: 65 YLAQKSERIVGLHEIYETP--HEM--VLVLEMVPDGELQRLVDIQDGIPEQDTRSYMKQI 120
LA + E I+G+++I P +M V +++ + + +L +L+ Q + ++ QI
Sbjct: 78 -LAFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQH-LSNDHICYFLYQI 135
Query: 121 LEALAFLHDHNITHLDLKPQNILLTKDNNIKLCDFGISRVVNDVVE----VKEIIGTPDY 176
L L ++H N+ H DLKP N+LL +++K+CDFG++RV + + + E + T Y
Sbjct: 136 LRGLKYIHSANVLHRDLKPSNLLLNTTSDLKICDFGLARVADPDHDHTGFLTEYVATRWY 195
Query: 177 VAPEV-LSYEPISLATDMWSVGVLAYVLLSSHSPFAGDNKQETFLNI-SQCNFSFHEDLF 234
APE+ L+ + + + D+WSVG + +LS+ F G + + +I EDL
Sbjct: 196 RAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLN 255
Query: 235 GHISSQAKDFIQS 247
I+ +A++++ S
Sbjct: 256 CGINLKARNYLLS 268
>pdb|2Y4I|C Chain C, Ksr2-Mek1 Heterodimer
Length = 395
Score = 82.0 bits (201), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 56/178 (31%), Positives = 91/178 (51%), Gaps = 4/178 (2%)
Query: 22 GKFASVRKCTHKITKVEYAAKFIRKRRRSMDQMQDILHEAAVLYLAQKSERIVGLHEIYE 81
G V K +HK + + A K I + + Q I+ E VL+ S IVG + +
Sbjct: 79 GNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQ-IIRELQVLHECN-SPYIVGFYGAFY 136
Query: 82 TPHEMVLVLEMVPDGELQRLVDIQDGIPEQDTRSYMKQILEALAFLHD-HNITHLDLKPQ 140
+ E+ + +E + G L +++ IPEQ +++ L +L + H I H D+KP
Sbjct: 137 SDGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAVIKGLTYLREKHKIMHRDVKPS 196
Query: 141 NILLTKDNNIKLCDFGISRVVNDVVEVKEIIGTPDYVAPEVLSYEPISLATDMWSVGV 198
NIL+ IKLCDFG+S + D + +GT Y++PE L S+ +D+WS+G+
Sbjct: 197 NILVNSRGEIKLCDFGVSGQLIDSM-ANSFVGTRSYMSPERLQGTHYSVQSDIWSMGL 253
>pdb|3GGF|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
pdb|3GGF|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
Length = 301
Score = 81.6 bits (200), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 43/140 (30%), Positives = 72/140 (51%), Gaps = 4/140 (2%)
Query: 115 SYMKQILEALAFLHDHNITHLDLKPQNILLTKDNNIKLCDFGISRVVNDV-VEVKEIIGT 173
+ +K+IL+ L +LH H D+K N+LL++ ++KL DFG++ + D ++ +GT
Sbjct: 124 TMLKEILKGLDYLHSEKKIHRDIKAANVLLSEQGDVKLADFGVAGQLTDTQIKRNTFVGT 183
Query: 174 PDYVAPEVLSYEPISLATDMWSVGVLAYVLLSSHSPFAGDNKQETFLNISQCNFSFHEDL 233
P ++APEV+ D+WS+G+ A L P + + I + N L
Sbjct: 184 PFWMAPEVIQQSAYDSKADIWSLGITAIELAKGEPPNSDMHPMRVLFLIPKNN---PPTL 240
Query: 234 FGHISSQAKDFIQSCLVTDP 253
G + K+FI +CL DP
Sbjct: 241 VGDFTKSFKEFIDACLNKDP 260
>pdb|4EQM|A Chain A, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|B Chain B, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|C Chain C, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|D Chain D, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|E Chain E, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|F Chain F, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
Length = 294
Score = 81.3 bits (199), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 50/198 (25%), Positives = 98/198 (49%), Gaps = 10/198 (5%)
Query: 22 GKFASVRKCTHKITKVEYAAKFI----RKRRRSMDQMQDILHEAAVLYLAQKSERIVGLH 77
G ++V I ++ A K I R++ ++ + + +H ++ L + IV +
Sbjct: 22 GGMSTVYLAEDTILNIKVAIKAIFIPPREKEETLKRFEREVHNSSQL----SHQNIVSMI 77
Query: 78 EIYETPHEMVLVLEMVPDGELQRLVDIQDGIPEQDTRSYMKQILEALAFLHDHNITHLDL 137
++ E LV+E + L ++ + ++ QIL+ + HD I H D+
Sbjct: 78 DVDEEDDCYYLVMEYIEGPTLSEYIESHGPLSVDTAINFTNQILDGIKHAHDMRIVHRDI 137
Query: 138 KPQNILLTKDNNIKLCDFGISRVVND--VVEVKEIIGTPDYVAPEVLSYEPISLATDMWS 195
KPQNIL+ + +K+ DFGI++ +++ + + ++GT Y +PE E TD++S
Sbjct: 138 KPQNILIDSNKTLKIFDFGIAKALSETSLTQTNHVLGTVQYFSPEQAKGEATDECTDIYS 197
Query: 196 VGVLAYVLLSSHSPFAGD 213
+G++ Y +L PF G+
Sbjct: 198 IGIVLYEMLVGEPPFNGE 215
>pdb|1H4L|A Chain A, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex
pdb|1H4L|B Chain B, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex
Length = 292
Score = 80.5 bits (197), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 60/198 (30%), Positives = 101/198 (51%), Gaps = 8/198 (4%)
Query: 22 GKFASVRKCTHKITKVEYAAKFIRKRRRSMDQMQDILHEAAVLYLAQKSERIVGLHEIYE 81
G + +V K ++ T A K +R L E +L K + IV LH++
Sbjct: 13 GTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLK-ELKHKNIVRLHDVLH 71
Query: 82 TPHEMVLVLEMVPDGELQRLVDIQDG-IPEQDTRSYMKQILEALAFLHDHNITHLDLKPQ 140
+ ++ LV E D +L++ D +G + + +S++ Q+L+ L F H N+ H DLKPQ
Sbjct: 72 SDKKLTLVFEFC-DQDLKKYFDSCNGDLDPEIVKSFLFQLLKGLGFCHSRNVLHRDLKPQ 130
Query: 141 NILLTKDNNIKLCDFGISRVVNDVVEV--KEIIGTPDYVAPEVL-SYEPISLATDMWSVG 197
N+L+ ++ +KL DFG++R V E++ T Y P+VL + S + DMWS G
Sbjct: 131 NLLINRNGELKLADFGLARAFGIPVRCYSAEVV-TLWYRPPDVLFGAKLYSTSIDMWSAG 189
Query: 198 VLAYVLLSSHSP-FAGDN 214
+ L ++ P F G++
Sbjct: 190 CIFAELANAARPLFPGND 207
>pdb|3TEI|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4H3P|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4H3P|D Chain D, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 80.1 bits (196), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 71/253 (28%), Positives = 123/253 (48%), Gaps = 15/253 (5%)
Query: 5 FFVNGGYQTLIFCMPSRGKFASVRKCTHKITKVEYAAKFIRKRRRSMDQMQDILHEAAVL 64
F V Y L + G + V + KV A K I Q L E +L
Sbjct: 21 FDVGPRYTNLSYI--GEGAYGMVCSAYDNVNKVRVAIKKISPFEHQT-YCQRTLREIKIL 77
Query: 65 YLAQKSERIVGLHEIYETP--HEM--VLVLEMVPDGELQRLVDIQDGIPEQDTRSYMKQI 120
LA + E I+G+++I P +M V +++ + + +L +L+ Q + ++ QI
Sbjct: 78 -LAFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQH-LSNDHICYFLYQI 135
Query: 121 LEALAFLHDHNITHLDLKPQNILLTKDNNIKLCDFGISRVVNDVVE----VKEIIGTPDY 176
L L ++H N+ H DLKP N+LL ++K+CDFG++RV + + + E + T Y
Sbjct: 136 LRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWY 195
Query: 177 VAPEV-LSYEPISLATDMWSVGVLAYVLLSSHSPFAGDNKQETFLNI-SQCNFSFHEDLF 234
APE+ L+ + + + D+WSVG + +LS+ F G + + +I EDL
Sbjct: 196 RAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLN 255
Query: 235 GHISSQAKDFIQS 247
I+ +A++++ S
Sbjct: 256 CIINLKARNYLLS 268
>pdb|3COM|A Chain A, Crystal Structure Of Mst1 Kinase
pdb|3COM|B Chain B, Crystal Structure Of Mst1 Kinase
Length = 314
Score = 80.1 bits (196), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 61/238 (25%), Positives = 115/238 (48%), Gaps = 12/238 (5%)
Query: 20 SRGKFASVRKCTHKITKVEYAAKFIRKRRRSMDQMQDILHEAAVLYLAQKSERIVGLHEI 79
G + SV K HK T A K + +Q+I+ E +++ S +V +
Sbjct: 38 GEGSYGSVYKAIHKETGQIVAIKQVPVE----SDLQEIIKEISIMQQCD-SPHVVKYYGS 92
Query: 80 YETPHEMVLVLEMVPDGELQRLVDIQDG-IPEQDTRSYMKQILEALAFLHDHNITHLDLK 138
Y ++ +V+E G + ++ +++ + E + + ++ L+ L +LH H D+K
Sbjct: 93 YFKNTDLWIVMEYCGAGSVSDIIRLRNKTLTEDEIATILQSTLKGLEYLHFMRKIHRDIK 152
Query: 139 PQNILLTKDNNIKLCDFGISRVVNDVVEVKE-IIGTPDYVAPEVLSYEPISLATDMWSVG 197
NILL + + KL DFG++ + D + + +IGTP ++APEV+ + D+WS+G
Sbjct: 153 AGNILLNTEGHAKLADFGVAGQLTDXMAKRNXVIGTPFWMAPEVIQEIGYNCVADIWSLG 212
Query: 198 VLAYVLLSSHSPFAGDNKQET-FLNISQCNFSFHE-DLFGHISSQAKDFIQSCLVTDP 253
+ A + P+A + F+ + +F + +L+ S DF++ CLV P
Sbjct: 213 ITAIEMAEGKPPYADIHPMRAIFMIPTNPPPTFRKPELW---SDNFTDFVKQCLVKSP 267
>pdb|3F69|A Chain A, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
pdb|3F69|B Chain B, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
Length = 311
Score = 79.7 bits (195), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 41/131 (31%), Positives = 72/131 (54%), Gaps = 4/131 (3%)
Query: 88 LVLEMVPDGELQRLVDIQDGIPEQDTRSYMKQILEALAFLHDHNITHLDLKPQNILLTKD 147
+V+E V L+ +V + + + + +AL F H + I H D+KP NIL++
Sbjct: 93 IVMEYVDGVTLRDIVHTEGPMTPKRAIEVIADACQALNFSHQNGIIHRDVKPANILISAT 152
Query: 148 NNIKLCDFGISRVV----NDVVEVKEIIGTPDYVAPEVLSYEPISLATDMWSVGVLAYVL 203
N +K+ DFGI+R + N V + +IGT Y++PE + + +D++S+G + Y +
Sbjct: 153 NAVKVVDFGIARAIADSGNSVXQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEV 212
Query: 204 LSSHSPFAGDN 214
L+ PF GD+
Sbjct: 213 LTGEPPFTGDS 223
>pdb|3CKX|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24) In Complex With Staurosporine
Length = 304
Score = 79.7 bits (195), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 42/145 (28%), Positives = 75/145 (51%), Gaps = 4/145 (2%)
Query: 110 EQDTRSYMKQILEALAFLHDHNITHLDLKPQNILLTKDNNIKLCDFGISRVVNDV-VEVK 168
E + +++IL+ L +LH H D+K N+LL++ +KL DFG++ + D ++
Sbjct: 103 ETQIATILREILKGLDYLHSEKKIHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQIKRN 162
Query: 169 EIIGTPDYVAPEVLSYEPISLATDMWSVGVLAYVLLSSHSPFAGDNKQETFLNISQCNFS 228
+GTP ++APEV+ D+WS+G+ A L P + + + I + N
Sbjct: 163 XFVGTPFWMAPEVIKQSAYDSKADIWSLGITAIELARGEPPHSELHPMKVLFLIPKNN-- 220
Query: 229 FHEDLFGHISSQAKDFIQSCLVTDP 253
L G+ S K+F+++CL +P
Sbjct: 221 -PPTLEGNYSKPLKEFVEACLNKEP 244
>pdb|3CKW|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24)
Length = 304
Score = 79.3 bits (194), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 42/145 (28%), Positives = 75/145 (51%), Gaps = 4/145 (2%)
Query: 110 EQDTRSYMKQILEALAFLHDHNITHLDLKPQNILLTKDNNIKLCDFGISRVVNDV-VEVK 168
E + +++IL+ L +LH H D+K N+LL++ +KL DFG++ + D ++
Sbjct: 103 ETQIATILREILKGLDYLHSEKKIHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQIKRN 162
Query: 169 EIIGTPDYVAPEVLSYEPISLATDMWSVGVLAYVLLSSHSPFAGDNKQETFLNISQCNFS 228
+GTP ++APEV+ D+WS+G+ A L P + + + I + N
Sbjct: 163 TFVGTPFWMAPEVIKQSAYDSKADIWSLGITAIELARGEPPHSELHPMKVLFLIPKNN-- 220
Query: 229 FHEDLFGHISSQAKDFIQSCLVTDP 253
L G+ S K+F+++CL +P
Sbjct: 221 -PPTLEGNYSKPLKEFVEACLNKEP 244
>pdb|1O6Y|A Chain A, Catalytic Domain Of Pknb Kinase From Mycobacterium
Tuberculosis
pdb|2FUM|A Chain A, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|B Chain B, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|C Chain C, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|D Chain D, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
Length = 299
Score = 79.3 bits (194), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 40/131 (30%), Positives = 72/131 (54%), Gaps = 4/131 (3%)
Query: 88 LVLEMVPDGELQRLVDIQDGIPEQDTRSYMKQILEALAFLHDHNITHLDLKPQNILLTKD 147
+V+E V L+ +V + + + + +AL F H + I H D+KP NI+++
Sbjct: 110 IVMEYVDGVTLRDIVHTEGPMTPKRAIEVIADACQALNFSHQNGIIHRDVKPANIMISAT 169
Query: 148 NNIKLCDFGISRVV----NDVVEVKEIIGTPDYVAPEVLSYEPISLATDMWSVGVLAYVL 203
N +K+ DFGI+R + N V + +IGT Y++PE + + +D++S+G + Y +
Sbjct: 170 NAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEV 229
Query: 204 LSSHSPFAGDN 214
L+ PF GD+
Sbjct: 230 LTGEPPFTGDS 240
>pdb|3A7F|A Chain A, Human Mst3 Kinase
pdb|3A7G|A Chain A, Human Mst3 Kinase
pdb|3A7G|B Chain B, Human Mst3 Kinase
pdb|3A7H|A Chain A, Human Mst3 Kinase In Complex With Atp
pdb|3A7H|B Chain B, Human Mst3 Kinase In Complex With Atp
pdb|3A7I|A Chain A, Human Mst3 Kinase In Complex With Adenine
pdb|3A7J|A Chain A, Human Mst3 Kinase In Complex With Mnadp
Length = 303
Score = 79.3 bits (194), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 42/145 (28%), Positives = 75/145 (51%), Gaps = 4/145 (2%)
Query: 110 EQDTRSYMKQILEALAFLHDHNITHLDLKPQNILLTKDNNIKLCDFGISRVVNDV-VEVK 168
E + +++IL+ L +LH H D+K N+LL++ +KL DFG++ + D ++
Sbjct: 118 ETQIATILREILKGLDYLHSEKKIHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQIKRN 177
Query: 169 EIIGTPDYVAPEVLSYEPISLATDMWSVGVLAYVLLSSHSPFAGDNKQETFLNISQCNFS 228
+GTP ++APEV+ D+WS+G+ A L P + + + I + N
Sbjct: 178 XFVGTPFWMAPEVIKQSAYDSKADIWSLGITAIELARGEPPHSELHPMKVLFLIPKNN-- 235
Query: 229 FHEDLFGHISSQAKDFIQSCLVTDP 253
L G+ S K+F+++CL +P
Sbjct: 236 -PPTLEGNYSKPLKEFVEACLNKEP 259
>pdb|2XIK|A Chain A, Structure Of Human Ysk1 (Yeast Sps1-Ste20-Related Kinase
1)
Length = 294
Score = 79.3 bits (194), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 41/138 (29%), Positives = 72/138 (52%), Gaps = 4/138 (2%)
Query: 117 MKQILEALAFLHDHNITHLDLKPQNILLTKDNNIKLCDFGISRVVNDV-VEVKEIIGTPD 175
+++IL+ L +LH H D+K N+LL++ ++KL DFG++ + D ++ +GTP
Sbjct: 122 LREILKGLDYLHSERKIHRDIKAANVLLSEQGDVKLADFGVAGQLTDTQIKRNXFVGTPF 181
Query: 176 YVAPEVLSYEPISLATDMWSVGVLAYVLLSSHSPFAGDNKQETFLNISQCNFSFHEDLFG 235
++APEV+ D+WS+G+ A L P + + I + + L G
Sbjct: 182 WMAPEVIKQSAYDFKADIWSLGITAIELAKGEPPNSDLHPMRVLFLIPKNS---PPTLEG 238
Query: 236 HISSQAKDFIQSCLVTDP 253
S K+F+++CL DP
Sbjct: 239 QHSKPFKEFVEACLNKDP 256
>pdb|3ORM|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain D76a Mutant
Length = 311
Score = 79.3 bits (194), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 53/194 (27%), Positives = 94/194 (48%), Gaps = 15/194 (7%)
Query: 28 RKCTHKITKVEYA--AKFIRKRRRSMDQMQDILHEAAV-LYLAQKSERIVGLHEIYETPH 84
R K+ + + A F + RR + H A V +Y ++E G P+
Sbjct: 38 RDVAVKVLRADLARDPSFYLRFRREAQNAAALNHPAIVAVYATGEAETPAG-----PLPY 92
Query: 85 EMVLVLEMVPDGELQRLVDIQDGIPEQDTRSYMKQILEALAFLHDHNITHLDLKPQNILL 144
+V+E V L+ +V + + + + +AL F H + I H D+KP NI++
Sbjct: 93 ---IVMEYVDGVTLRDIVHTEGPMTPKRAIEVIADACQALNFSHQNGIIHRDVKPANIMI 149
Query: 145 TKDNNIKLCDFGISRVV----NDVVEVKEIIGTPDYVAPEVLSYEPISLATDMWSVGVLA 200
+ N +K+ DFGI+R + N V + +IGT Y++PE + + +D++S+G +
Sbjct: 150 SATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVL 209
Query: 201 YVLLSSHSPFAGDN 214
Y +L+ PF GD+
Sbjct: 210 YEVLTGEPPFTGDS 223
>pdb|3ZHP|C Chain C, Human Mst3 (stk24) In Complex With Mo25beta
pdb|3ZHP|D Chain D, Human Mst3 (stk24) In Complex With Mo25beta
Length = 294
Score = 79.3 bits (194), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 42/145 (28%), Positives = 75/145 (51%), Gaps = 4/145 (2%)
Query: 110 EQDTRSYMKQILEALAFLHDHNITHLDLKPQNILLTKDNNIKLCDFGISRVVNDV-VEVK 168
E + +++IL+ L +LH H D+K N+LL++ +KL DFG++ + D ++
Sbjct: 123 ETQIATILREILKGLDYLHSEKKIHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQIKRN 182
Query: 169 EIIGTPDYVAPEVLSYEPISLATDMWSVGVLAYVLLSSHSPFAGDNKQETFLNISQCNFS 228
+GTP ++APEV+ D+WS+G+ A L P + + + I + N
Sbjct: 183 TFVGTPFWMAPEVIKQSAYDSKADIWSLGITAIELARGEPPHSELHPMKVLFLIPKNN-- 240
Query: 229 FHEDLFGHISSQAKDFIQSCLVTDP 253
L G+ S K+F+++CL +P
Sbjct: 241 -PPTLEGNYSKPLKEFVEACLNKEP 264
>pdb|1MRU|A Chain A, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb.
pdb|1MRU|B Chain B, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb
Length = 311
Score = 79.0 bits (193), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 40/131 (30%), Positives = 72/131 (54%), Gaps = 4/131 (3%)
Query: 88 LVLEMVPDGELQRLVDIQDGIPEQDTRSYMKQILEALAFLHDHNITHLDLKPQNILLTKD 147
+V+E V L+ +V + + + + +AL F H + I H D+KP NI+++
Sbjct: 93 IVMEYVDGVTLRDIVHTEGPMTPKRAIEVIADACQALNFSHQNGIIHRDVKPANIMISAT 152
Query: 148 NNIKLCDFGISRVV----NDVVEVKEIIGTPDYVAPEVLSYEPISLATDMWSVGVLAYVL 203
N +K+ DFGI+R + N V + +IGT Y++PE + + +D++S+G + Y +
Sbjct: 153 NAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEV 212
Query: 204 LSSHSPFAGDN 214
L+ PF GD+
Sbjct: 213 LTGEPPFTGDS 223
>pdb|3ORI|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|B Chain B, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|C Chain C, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|D Chain D, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORK|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 2)
pdb|3ORL|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 3)
pdb|3ORO|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 4)
pdb|3ORP|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 5)
pdb|3ORT|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 6)
Length = 311
Score = 79.0 bits (193), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 40/131 (30%), Positives = 72/131 (54%), Gaps = 4/131 (3%)
Query: 88 LVLEMVPDGELQRLVDIQDGIPEQDTRSYMKQILEALAFLHDHNITHLDLKPQNILLTKD 147
+V+E V L+ +V + + + + +AL F H + I H D+KP NI+++
Sbjct: 93 IVMEYVDGVTLRDIVHTEGPMTPKRAIEVIADACQALNFSHQNGIIHRDVKPANIMISAT 152
Query: 148 NNIKLCDFGISRVV----NDVVEVKEIIGTPDYVAPEVLSYEPISLATDMWSVGVLAYVL 203
N +K+ DFGI+R + N V + +IGT Y++PE + + +D++S+G + Y +
Sbjct: 153 NAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEV 212
Query: 204 LSSHSPFAGDN 214
L+ PF GD+
Sbjct: 213 LTGEPPFTGDS 223
>pdb|1UNG|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNG|B Chain B, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNH|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNH|B Chain B, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNL|A Chain A, Structural Mechanism For The Inhibition Of Cd5-P25 From
The Roscovitine, Aloisine And Indirubin.
pdb|1UNL|B Chain B, Structural Mechanism For The Inhibition Of Cd5-P25 From
The Roscovitine, Aloisine And Indirubin.
pdb|3O0G|A Chain A, Crystal Structure Of Cdk5:p25 In Complex With An Atp
Analogue
pdb|3O0G|B Chain B, Crystal Structure Of Cdk5:p25 In Complex With An Atp
Analogue
Length = 292
Score = 79.0 bits (193), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 59/198 (29%), Positives = 101/198 (51%), Gaps = 8/198 (4%)
Query: 22 GKFASVRKCTHKITKVEYAAKFIRKRRRSMDQMQDILHEAAVLYLAQKSERIVGLHEIYE 81
G + +V K ++ T A K +R L E +L K + IV LH++
Sbjct: 13 GTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLK-ELKHKNIVRLHDVLH 71
Query: 82 TPHEMVLVLEMVPDGELQRLVDIQDG-IPEQDTRSYMKQILEALAFLHDHNITHLDLKPQ 140
+ ++ LV E D +L++ D +G + + +S++ Q+L+ L F H N+ H DLKPQ
Sbjct: 72 SDKKLTLVFEFC-DQDLKKYFDSCNGDLDPEIVKSFLFQLLKGLGFCHSRNVLHRDLKPQ 130
Query: 141 NILLTKDNNIKLCDFGISRVVNDVVEV--KEIIGTPDYVAPEVL-SYEPISLATDMWSVG 197
N+L+ ++ +KL +FG++R V E++ T Y P+VL + S + DMWS G
Sbjct: 131 NLLINRNGELKLANFGLARAFGIPVRCYSAEVV-TLWYRPPDVLFGAKLYSTSIDMWSAG 189
Query: 198 VLAYVLLSSHSP-FAGDN 214
+ L ++ P F G++
Sbjct: 190 CIFAELANAGRPLFPGND 207
>pdb|3F61|A Chain A, Crystal Structure Of M. Tuberculosis Pknb
Leu33aspVAL222ASP DOUBLE MUTANT IN COMPLEX WITH ADP
Length = 311
Score = 79.0 bits (193), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 40/131 (30%), Positives = 72/131 (54%), Gaps = 4/131 (3%)
Query: 88 LVLEMVPDGELQRLVDIQDGIPEQDTRSYMKQILEALAFLHDHNITHLDLKPQNILLTKD 147
+V+E V L+ +V + + + + +AL F H + I H D+KP NI+++
Sbjct: 93 IVMEYVDGVTLRDIVHTEGPMTPKRAIEVIADACQALNFSHQNGIIHRDVKPANIMISAT 152
Query: 148 NNIKLCDFGISRVV----NDVVEVKEIIGTPDYVAPEVLSYEPISLATDMWSVGVLAYVL 203
N +K+ DFGI+R + N V + +IGT Y++PE + + +D++S+G + Y +
Sbjct: 153 NAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEV 212
Query: 204 LSSHSPFAGDN 214
L+ PF GD+
Sbjct: 213 LTGEPPFTGDS 223
>pdb|4FUX|A Chain A, Crystal Structure Of The Erk2 Complexed With E75
pdb|4FV1|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek4
pdb|4FV2|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek5
pdb|4FV3|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek6
pdb|4FV4|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek7
pdb|4FV5|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek9
pdb|4FV8|A Chain A, Crystal Structure Of The Erk2 Complexed With E63
pdb|4FV9|A Chain A, Crystal Structure Of The Erk2 Complexed With E71
pdb|4G6N|A Chain A, Crystal Structure Of The Erk2
Length = 360
Score = 78.6 bits (192), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 70/253 (27%), Positives = 122/253 (48%), Gaps = 15/253 (5%)
Query: 5 FFVNGGYQTLIFCMPSRGKFASVRKCTHKITKVEYAAKFIRKRRRSMDQMQDILHEAAVL 64
F V Y L + G + V + KV A K I Q L E +L
Sbjct: 19 FDVGPRYTNLSYI--GEGAYGMVCSAYDNVNKVRVAIKKISPFEHQT-YCQRTLREIKIL 75
Query: 65 YLAQKSERIVGLHEIYETP--HEM--VLVLEMVPDGELQRLVDIQDGIPEQDTRSYMKQI 120
L + E I+G+++I P +M V +++ + + +L +L+ Q + ++ QI
Sbjct: 76 -LRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQH-LSNDHICYFLYQI 133
Query: 121 LEALAFLHDHNITHLDLKPQNILLTKDNNIKLCDFGISRVVNDVVE----VKEIIGTPDY 176
L L ++H N+ H DLKP N+LL ++K+CDFG++RV + + + E + T Y
Sbjct: 134 LRGLKYIHSANVLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVATRWY 193
Query: 177 VAPEV-LSYEPISLATDMWSVGVLAYVLLSSHSPFAGDNKQETFLNI-SQCNFSFHEDLF 234
APE+ L+ + + + D+WSVG + +LS+ F G + + +I EDL
Sbjct: 194 RAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLN 253
Query: 235 GHISSQAKDFIQS 247
I+ +A++++ S
Sbjct: 254 CIINLKARNYLLS 266
>pdb|4FV7|A Chain A, Crystal Structure Of The Erk2 Complexed With E94
pdb|4G6O|A Chain A, Crystal Structure Of The Erk2
Length = 360
Score = 78.6 bits (192), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 70/253 (27%), Positives = 122/253 (48%), Gaps = 15/253 (5%)
Query: 5 FFVNGGYQTLIFCMPSRGKFASVRKCTHKITKVEYAAKFIRKRRRSMDQMQDILHEAAVL 64
F V Y L + G + V + KV A K I Q L E +L
Sbjct: 19 FDVGPRYTNLSYI--GEGAYGMVCSAYDNVNKVRVAIKKISPFEHQT-YCQRTLREIKIL 75
Query: 65 YLAQKSERIVGLHEIYETP--HEM--VLVLEMVPDGELQRLVDIQDGIPEQDTRSYMKQI 120
L + E I+G+++I P +M V +++ + + +L +L+ Q + ++ QI
Sbjct: 76 -LRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQH-LSNDHICYFLYQI 133
Query: 121 LEALAFLHDHNITHLDLKPQNILLTKDNNIKLCDFGISRVVNDVVE----VKEIIGTPDY 176
L L ++H N+ H DLKP N+LL ++K+CDFG++RV + + + E + T Y
Sbjct: 134 LRGLKYIHSANVLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVATRWY 193
Query: 177 VAPEV-LSYEPISLATDMWSVGVLAYVLLSSHSPFAGDNKQETFLNI-SQCNFSFHEDLF 234
APE+ L+ + + + D+WSVG + +LS+ F G + + +I EDL
Sbjct: 194 RAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLN 253
Query: 235 GHISSQAKDFIQS 247
I+ +A++++ S
Sbjct: 254 XIINLKARNYLLS 266
>pdb|4GSB|A Chain A, Monoclinic Crystal Form Of The Apo-Erk2
Length = 364
Score = 78.2 bits (191), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 70/253 (27%), Positives = 122/253 (48%), Gaps = 15/253 (5%)
Query: 5 FFVNGGYQTLIFCMPSRGKFASVRKCTHKITKVEYAAKFIRKRRRSMDQMQDILHEAAVL 64
F V Y L + G + V + KV A K I Q L E +L
Sbjct: 23 FDVGPRYTNLSYI--GEGAYGMVCSAYDNLNKVRVAIKKISPFEHQT-YXQRTLREIKIL 79
Query: 65 YLAQKSERIVGLHEIYETP--HEM--VLVLEMVPDGELQRLVDIQDGIPEQDTRSYMKQI 120
L + E I+G+++I P +M V +++ + + +L +L+ Q + ++ QI
Sbjct: 80 -LRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQH-LSNDHICYFLYQI 137
Query: 121 LEALAFLHDHNITHLDLKPQNILLTKDNNIKLCDFGISRVVNDVVE----VKEIIGTPDY 176
L L ++H N+ H DLKP N+LL ++K+CDFG++RV + + + E + T Y
Sbjct: 138 LRGLKYIHSANVLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVATRWY 197
Query: 177 VAPEV-LSYEPISLATDMWSVGVLAYVLLSSHSPFAGDNKQETFLNI-SQCNFSFHEDLF 234
APE+ L+ + + + D+WSVG + +LS+ F G + + +I EDL
Sbjct: 198 RAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLN 257
Query: 235 GHISSQAKDFIQS 247
I+ +A++++ S
Sbjct: 258 CIINLKARNYLLS 270
>pdb|2OJG|A Chain A, Crystal Structure Of Erk2 In Complex With
N,n-dimethyl-4-(4-
Phenyl-1h-pyrazol-3-yl)-1h-pyrrole-2-carboxamide
pdb|2OJI|A Chain A, Crystal Structure Of Erk2 In Complex With
N-Benzyl-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|2OJJ|A Chain A, Crystal Structure Of Erk2 In Complex With (S)-N-(1-(3-
Chloro-4-Fluorophenyl)-2-Hydroxyethyl)-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|3I5Z|A Chain A, Crystal Structure Of Erk2 Bound To
(S)-N-(2-Hydroxy-1-Phenylethyl)-4-
(5-Methyl-2-(Phenylamino)pyrimidin-4-Yl)-1h-Pyrrole-2-
Carboxamide
pdb|3I60|A Chain A, Crystal Structure Of Erk2 Bound To
(s)-4-(2-(2-chlorophenylamino)-5-
Methylpyrimidin-4-yl)-n-(2-hydroxy-1-phenylethyl)-1h-
pyrrole-2- Carboxamide
Length = 380
Score = 77.8 bits (190), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 70/253 (27%), Positives = 122/253 (48%), Gaps = 15/253 (5%)
Query: 5 FFVNGGYQTLIFCMPSRGKFASVRKCTHKITKVEYAAKFIRKRRRSMDQMQDILHEAAVL 64
F V Y L + G + V + KV A K I Q L E +L
Sbjct: 39 FDVGPRYTNLSYI--GEGAYGMVCSAYDNVNKVRVAIKKISPFEHQT-YCQRTLREIKIL 95
Query: 65 YLAQKSERIVGLHEIYETP--HEM--VLVLEMVPDGELQRLVDIQDGIPEQDTRSYMKQI 120
L + E I+G+++I P +M V +++ + + +L +L+ Q + ++ QI
Sbjct: 96 -LRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQH-LSNDHICYFLYQI 153
Query: 121 LEALAFLHDHNITHLDLKPQNILLTKDNNIKLCDFGISRVVNDVVE----VKEIIGTPDY 176
L L ++H N+ H DLKP N+LL ++K+CDFG++RV + + + E + T Y
Sbjct: 154 LRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWY 213
Query: 177 VAPEV-LSYEPISLATDMWSVGVLAYVLLSSHSPFAGDNKQETFLNI-SQCNFSFHEDLF 234
APE+ L+ + + + D+WSVG + +LS+ F G + + +I EDL
Sbjct: 214 RAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLN 273
Query: 235 GHISSQAKDFIQS 247
I+ +A++++ S
Sbjct: 274 CIINLKARNYLLS 286
>pdb|1WZY|A Chain A, Crystal Structure Of Human Erk2 Complexed With A
Pyrazolopyridazine Derivative
pdb|3W55|A Chain A, The Structure Of Erk2 In Complex With Fr148083
Length = 368
Score = 77.8 bits (190), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 70/253 (27%), Positives = 122/253 (48%), Gaps = 15/253 (5%)
Query: 5 FFVNGGYQTLIFCMPSRGKFASVRKCTHKITKVEYAAKFIRKRRRSMDQMQDILHEAAVL 64
F V Y L + G + V + KV A K I Q L E +L
Sbjct: 27 FDVGPRYTNLSYI--GEGAYGMVCSAYDNVNKVRVAIKKISPFEHQT-YCQRTLREIKIL 83
Query: 65 YLAQKSERIVGLHEIYETP--HEM--VLVLEMVPDGELQRLVDIQDGIPEQDTRSYMKQI 120
L + E I+G+++I P +M V +++ + + +L +L+ Q + ++ QI
Sbjct: 84 -LRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQH-LSNDHICYFLYQI 141
Query: 121 LEALAFLHDHNITHLDLKPQNILLTKDNNIKLCDFGISRVVNDVVE----VKEIIGTPDY 176
L L ++H N+ H DLKP N+LL ++K+CDFG++RV + + + E + T Y
Sbjct: 142 LRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWY 201
Query: 177 VAPEV-LSYEPISLATDMWSVGVLAYVLLSSHSPFAGDNKQETFLNI-SQCNFSFHEDLF 234
APE+ L+ + + + D+WSVG + +LS+ F G + + +I EDL
Sbjct: 202 RAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLN 261
Query: 235 GHISSQAKDFIQS 247
I+ +A++++ S
Sbjct: 262 CIINLKARNYLLS 274
>pdb|1TVO|A Chain A, The Structure Of Erk2 In Complex With A Small Molecule
Inhibitor
Length = 368
Score = 77.8 bits (190), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 70/253 (27%), Positives = 122/253 (48%), Gaps = 15/253 (5%)
Query: 5 FFVNGGYQTLIFCMPSRGKFASVRKCTHKITKVEYAAKFIRKRRRSMDQMQDILHEAAVL 64
F V Y L + G + V + KV A K I Q L E +L
Sbjct: 19 FDVGPRYTNLSYI--GEGAYGMVCSAYDNVNKVRVAIKKISPFEHQT-YCQRTLREIKIL 75
Query: 65 YLAQKSERIVGLHEIYETP--HEM--VLVLEMVPDGELQRLVDIQDGIPEQDTRSYMKQI 120
L + E I+G+++I P +M V +++ + + +L +L+ Q + ++ QI
Sbjct: 76 -LRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQH-LSNDHICYFLYQI 133
Query: 121 LEALAFLHDHNITHLDLKPQNILLTKDNNIKLCDFGISRVVNDVVE----VKEIIGTPDY 176
L L ++H N+ H DLKP N+LL ++K+CDFG++RV + + + E + T Y
Sbjct: 134 LRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWY 193
Query: 177 VAPEV-LSYEPISLATDMWSVGVLAYVLLSSHSPFAGDNKQETFLNI-SQCNFSFHEDLF 234
APE+ L+ + + + D+WSVG + +LS+ F G + + +I EDL
Sbjct: 194 RAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLN 253
Query: 235 GHISSQAKDFIQS 247
I+ +A++++ S
Sbjct: 254 CIINLKARNYLLS 266
>pdb|2Y9Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4FMQ|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 77.8 bits (190), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 70/253 (27%), Positives = 122/253 (48%), Gaps = 15/253 (5%)
Query: 5 FFVNGGYQTLIFCMPSRGKFASVRKCTHKITKVEYAAKFIRKRRRSMDQMQDILHEAAVL 64
F V Y L + G + V + KV A K I Q L E +L
Sbjct: 21 FDVGPRYTNLSYI--GEGAYGMVCSAYDNVNKVRVAIKKISPFEHQT-YCQRTLREIKIL 77
Query: 65 YLAQKSERIVGLHEIYETP--HEM--VLVLEMVPDGELQRLVDIQDGIPEQDTRSYMKQI 120
L + E I+G+++I P +M V +++ + + +L +L+ Q + ++ QI
Sbjct: 78 -LRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQH-LSNDHICYFLYQI 135
Query: 121 LEALAFLHDHNITHLDLKPQNILLTKDNNIKLCDFGISRVVNDVVE----VKEIIGTPDY 176
L L ++H N+ H DLKP N+LL ++K+CDFG++RV + + + E + T Y
Sbjct: 136 LRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWY 195
Query: 177 VAPEV-LSYEPISLATDMWSVGVLAYVLLSSHSPFAGDNKQETFLNI-SQCNFSFHEDLF 234
APE+ L+ + + + D+WSVG + +LS+ F G + + +I EDL
Sbjct: 196 RAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLN 255
Query: 235 GHISSQAKDFIQS 247
I+ +A++++ S
Sbjct: 256 CIINLKARNYLLS 268
>pdb|3QYW|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor
pdb|3QYZ|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor
pdb|4GT3|A Chain A, Atp-Bound Form Of The Erk2 Kinase
pdb|4GVA|A Chain A, Adp-Bound Form Of The Erk2 Kinase
Length = 364
Score = 77.8 bits (190), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 70/253 (27%), Positives = 122/253 (48%), Gaps = 15/253 (5%)
Query: 5 FFVNGGYQTLIFCMPSRGKFASVRKCTHKITKVEYAAKFIRKRRRSMDQMQDILHEAAVL 64
F V Y L + G + V + KV A K I Q L E +L
Sbjct: 23 FDVGPRYTNLSYI--GEGAYGMVCSAYDNLNKVRVAIKKISPFEHQT-YCQRTLREIKIL 79
Query: 65 YLAQKSERIVGLHEIYETP--HEM--VLVLEMVPDGELQRLVDIQDGIPEQDTRSYMKQI 120
L + E I+G+++I P +M V +++ + + +L +L+ Q + ++ QI
Sbjct: 80 -LRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQH-LSNDHICYFLYQI 137
Query: 121 LEALAFLHDHNITHLDLKPQNILLTKDNNIKLCDFGISRVVNDVVE----VKEIIGTPDY 176
L L ++H N+ H DLKP N+LL ++K+CDFG++RV + + + E + T Y
Sbjct: 138 LRGLKYIHSANVLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVATRWY 197
Query: 177 VAPEV-LSYEPISLATDMWSVGVLAYVLLSSHSPFAGDNKQETFLNI-SQCNFSFHEDLF 234
APE+ L+ + + + D+WSVG + +LS+ F G + + +I EDL
Sbjct: 198 RAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLN 257
Query: 235 GHISSQAKDFIQS 247
I+ +A++++ S
Sbjct: 258 CIINLKARNYLLS 270
>pdb|4FV6|A Chain A, Crystal Structure Of The Erk2 Complexed With E57
Length = 360
Score = 77.8 bits (190), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 70/253 (27%), Positives = 122/253 (48%), Gaps = 15/253 (5%)
Query: 5 FFVNGGYQTLIFCMPSRGKFASVRKCTHKITKVEYAAKFIRKRRRSMDQMQDILHEAAVL 64
F V Y L + G + V + KV A K I Q L E +L
Sbjct: 19 FDVGPRYTNLSYI--GEGAYGMVCSAYDNVNKVRVAIKKISPFEHQT-YCQRTLREIKIL 75
Query: 65 YLAQKSERIVGLHEIYETP--HEM--VLVLEMVPDGELQRLVDIQDGIPEQDTRSYMKQI 120
L + E I+G+++I P +M V +++ + + +L +L+ Q + ++ QI
Sbjct: 76 -LRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQH-LSNDHICYFLYQI 133
Query: 121 LEALAFLHDHNITHLDLKPQNILLTKDNNIKLCDFGISRVVNDVVE----VKEIIGTPDY 176
L L ++H N+ H DLKP N+LL ++K+CDFG++RV + + + E + T Y
Sbjct: 134 LRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWY 193
Query: 177 VAPEV-LSYEPISLATDMWSVGVLAYVLLSSHSPFAGDNKQETFLNI-SQCNFSFHEDLF 234
APE+ L+ + + + D+WSVG + +LS+ F G + + +I EDL
Sbjct: 194 RAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLN 253
Query: 235 GHISSQAKDFIQS 247
I+ +A++++ S
Sbjct: 254 CIINLKARNYLLS 266
>pdb|1PME|A Chain A, Structure Of Penta Mutant Human Erk2 Map Kinase Complexed
With A Specific Inhibitor Of Human P38 Map Kinase
Length = 380
Score = 77.8 bits (190), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 70/254 (27%), Positives = 120/254 (47%), Gaps = 17/254 (6%)
Query: 5 FFVNGGYQTLIFCMPSRGKFASVRKCTHKITKVEYAAKFIRKRRRSMDQMQDILHEAAVL 64
F V Y L + G + V + KV A K I Q L E +L
Sbjct: 39 FDVGPRYTNLSYI--GEGAYGMVCSAYDNVNKVRVAIKKISPFEHQT-YCQRTLREIKIL 95
Query: 65 YLAQKSERIVGLHEIYETP-----HEMVLVLEMVPDGELQRLVDIQDGIPEQDTRSYMKQ 119
L + E I+G+++I P ++ LV ++ +L +L+ Q + ++ Q
Sbjct: 96 -LRFRHENIIGINDIIRAPTIEQMKDVYLVTHLM-GADLYKLLKTQH-LSNDHICYFLYQ 152
Query: 120 ILEALAFLHDHNITHLDLKPQNILLTKDNNIKLCDFGISRVVNDVVE----VKEIIGTPD 175
IL L ++H N+ H DLKP N+LL ++K+CDFG++RV + + + E + T
Sbjct: 153 ILRGLKYIHSANVLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVATRW 212
Query: 176 YVAPEV-LSYEPISLATDMWSVGVLAYVLLSSHSPFAGDNKQETFLNI-SQCNFSFHEDL 233
Y APE+ L+ + + + D+WSVG + +LS+ F G + + +I EDL
Sbjct: 213 YRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDL 272
Query: 234 FGHISSQAKDFIQS 247
I+ +A++++ S
Sbjct: 273 NCIINLKARNYLLS 286
>pdb|3ZUV|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Phosphorylated Map Kinase
Erk2
pdb|3ZUV|C Chain C, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Phosphorylated Map Kinase
Erk2
Length = 364
Score = 77.8 bits (190), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 70/253 (27%), Positives = 122/253 (48%), Gaps = 15/253 (5%)
Query: 5 FFVNGGYQTLIFCMPSRGKFASVRKCTHKITKVEYAAKFIRKRRRSMDQMQDILHEAAVL 64
F V Y L + G + V + KV A K I Q L E +L
Sbjct: 23 FDVGPRYTNLSYI--GEGAYGMVCSAYDNLNKVRVAIKKISPFEHQT-YCQRTLREIKIL 79
Query: 65 YLAQKSERIVGLHEIYETP--HEM--VLVLEMVPDGELQRLVDIQDGIPEQDTRSYMKQI 120
L + E I+G+++I P +M V +++ + + +L +L+ Q + ++ QI
Sbjct: 80 -LRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQH-LSNDHICYFLYQI 137
Query: 121 LEALAFLHDHNITHLDLKPQNILLTKDNNIKLCDFGISRVVNDVVE----VKEIIGTPDY 176
L L ++H N+ H DLKP N+LL ++K+CDFG++RV + + + E + T Y
Sbjct: 138 LRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLXEXVATRWY 197
Query: 177 VAPEV-LSYEPISLATDMWSVGVLAYVLLSSHSPFAGDNKQETFLNI-SQCNFSFHEDLF 234
APE+ L+ + + + D+WSVG + +LS+ F G + + +I EDL
Sbjct: 198 RAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLN 257
Query: 235 GHISSQAKDFIQS 247
I+ +A++++ S
Sbjct: 258 CIINLKARNYLLS 270
>pdb|2ERK|A Chain A, Phosphorylated Map Kinase Erk2
Length = 365
Score = 77.8 bits (190), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 70/253 (27%), Positives = 122/253 (48%), Gaps = 15/253 (5%)
Query: 5 FFVNGGYQTLIFCMPSRGKFASVRKCTHKITKVEYAAKFIRKRRRSMDQMQDILHEAAVL 64
F V Y L + G + V + KV A K I Q L E +L
Sbjct: 24 FDVGPRYTNLSYI--GEGAYGMVCSAYDNLNKVRVAIKKISPFEHQT-YCQRTLREIKIL 80
Query: 65 YLAQKSERIVGLHEIYETP--HEM--VLVLEMVPDGELQRLVDIQDGIPEQDTRSYMKQI 120
L + E I+G+++I P +M V +++ + + +L +L+ Q + ++ QI
Sbjct: 81 -LRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQH-LSNDHICYFLYQI 138
Query: 121 LEALAFLHDHNITHLDLKPQNILLTKDNNIKLCDFGISRVVNDVVE----VKEIIGTPDY 176
L L ++H N+ H DLKP N+LL ++K+CDFG++RV + + + E + T Y
Sbjct: 139 LRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLXEXVATRWY 198
Query: 177 VAPEV-LSYEPISLATDMWSVGVLAYVLLSSHSPFAGDNKQETFLNI-SQCNFSFHEDLF 234
APE+ L+ + + + D+WSVG + +LS+ F G + + +I EDL
Sbjct: 199 RAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLN 258
Query: 235 GHISSQAKDFIQS 247
I+ +A++++ S
Sbjct: 259 CIINLKARNYLLS 271
>pdb|3MTL|A Chain A, Crystal Structure Of The Pctaire1 Kinase In Complex With
Ind E804
Length = 324
Score = 77.4 bits (189), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 61/199 (30%), Positives = 93/199 (46%), Gaps = 6/199 (3%)
Query: 22 GKFASVRKCTHKITKVEYAAKFIRKRRRSMDQMQDILHEAAVLYLAQKSERIVGLHEIYE 81
G +A+V K K+T A K IR I E ++L K IV LH+I
Sbjct: 13 GTYATVYKGKSKLTDNLVALKEIRLEHEEGAPCTAI-REVSLLK-DLKHANIVTLHDIIH 70
Query: 82 TPHEMVLVLEMVPDGELQRLVDIQDGIPEQDTRSYMKQILEALAFLHDHNITHLDLKPQN 141
T + LV E + Q L D + I + + ++ Q+L LA+ H + H DLKPQN
Sbjct: 71 TEKSLTLVFEYLDKDLKQYLDDCGNIINMHNVKLFLFQLLRGLAYCHRQKVLHRDLKPQN 130
Query: 142 ILLTKDNNIKLCDFGISRVVNDVVEV--KEIIGTPDYVAPEV-LSYEPISLATDMWSVGV 198
+L+ + +KL DFG++R + + E++ T Y P++ L S DMW VG
Sbjct: 131 LLINERGELKLADFGLARAKSIPTKTYDNEVV-TLWYRPPDILLGSTDYSTQIDMWGVGC 189
Query: 199 LAYVLLSSHSPFAGDNKQE 217
+ Y + + F G +E
Sbjct: 190 IFYEMATGRPLFPGSTVEE 208
>pdb|2GPH|A Chain A, Docking Motif Interactions In The Map Kinase Erk2
Length = 364
Score = 77.4 bits (189), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 70/253 (27%), Positives = 122/253 (48%), Gaps = 15/253 (5%)
Query: 5 FFVNGGYQTLIFCMPSRGKFASVRKCTHKITKVEYAAKFIRKRRRSMDQMQDILHEAAVL 64
F V Y L + G + V + KV A K I Q L E +L
Sbjct: 23 FDVGPRYTNLSYI--GEGAYGMVCSAYDNLNKVRVAIKKISPFEHQT-YCQRTLREIKIL 79
Query: 65 YLAQKSERIVGLHEIYETP--HEM--VLVLEMVPDGELQRLVDIQDGIPEQDTRSYMKQI 120
L + E I+G+++I P +M V +++ + + +L +L+ Q + ++ QI
Sbjct: 80 -LRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKCQH-LSNDHICYFLYQI 137
Query: 121 LEALAFLHDHNITHLDLKPQNILLTKDNNIKLCDFGISRVVNDVVE----VKEIIGTPDY 176
L L ++H N+ H DLKP N+LL ++K+CDFG++RV + + + E + T Y
Sbjct: 138 LRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWY 197
Query: 177 VAPEV-LSYEPISLATDMWSVGVLAYVLLSSHSPFAGDNKQETFLNI-SQCNFSFHEDLF 234
APE+ L+ + + + D+WSVG + +LS+ F G + + +I EDL
Sbjct: 198 RAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLN 257
Query: 235 GHISSQAKDFIQS 247
I+ +A++++ S
Sbjct: 258 CIINLKARNYLLS 270
>pdb|4A4X|A Chain A, Nek2-Ede Bound To Cct248662
Length = 279
Score = 77.4 bits (189), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 42/117 (35%), Positives = 64/117 (54%), Gaps = 6/117 (5%)
Query: 117 MKQILEALAFLH-----DHNITHLDLKPQNILLTKDNNIKLCDFGISRVVN-DVVEVKEI 170
M Q+ AL H H + H DLKP N+ L N+KL DFG++R++N D KE
Sbjct: 117 MTQLTLALKECHRRSDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLARILNHDEDFAKEF 176
Query: 171 IGTPDYVAPEVLSYEPISLATDMWSVGVLAYVLLSSHSPFAGDNKQETFLNISQCNF 227
+GTP Y++PE ++ + +D+WS+G L Y L + PF +++E I + F
Sbjct: 177 VGTPYYMSPEQMNRMSYNEKSDIWSLGCLLYELCALMPPFTAFSQKELAGKIREGKF 233
>pdb|3ZU7|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Map Kinase Erk2
Length = 365
Score = 77.4 bits (189), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 70/253 (27%), Positives = 122/253 (48%), Gaps = 15/253 (5%)
Query: 5 FFVNGGYQTLIFCMPSRGKFASVRKCTHKITKVEYAAKFIRKRRRSMDQMQDILHEAAVL 64
F V Y L + G + V + KV A K I Q L E +L
Sbjct: 24 FDVGPRYTNLSYI--GEGAYGMVCSAYDNLNKVRVAIKKISPFEHQT-YCQRTLREIKIL 80
Query: 65 YLAQKSERIVGLHEIYETP--HEM--VLVLEMVPDGELQRLVDIQDGIPEQDTRSYMKQI 120
L + E I+G+++I P +M V +++ + + +L +L+ Q + ++ QI
Sbjct: 81 -LRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQH-LSNDHICYFLYQI 138
Query: 121 LEALAFLHDHNITHLDLKPQNILLTKDNNIKLCDFGISRVVNDVVE----VKEIIGTPDY 176
L L ++H N+ H DLKP N+LL ++K+CDFG++RV + + + E + T Y
Sbjct: 139 LRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWY 198
Query: 177 VAPEV-LSYEPISLATDMWSVGVLAYVLLSSHSPFAGDNKQETFLNI-SQCNFSFHEDLF 234
APE+ L+ + + + D+WSVG + +LS+ F G + + +I EDL
Sbjct: 199 RAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLN 258
Query: 235 GHISSQAKDFIQS 247
I+ +A++++ S
Sbjct: 259 CIINLKARNYLLS 271
>pdb|2Z7L|A Chain A, Unphosphorylated Mitogen Activated Protein Kinase Erk2 In
Complex With
(4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin
2-Yl]amino}phenyl)acetic Acid
Length = 366
Score = 77.4 bits (189), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 70/253 (27%), Positives = 122/253 (48%), Gaps = 15/253 (5%)
Query: 5 FFVNGGYQTLIFCMPSRGKFASVRKCTHKITKVEYAAKFIRKRRRSMDQMQDILHEAAVL 64
F V Y L + G + V + KV A K I Q L E +L
Sbjct: 25 FDVGPRYTNLSYI--GEGAYGMVCSAYDNLNKVRVAIKKISPFEHQT-YCQRTLREIKIL 81
Query: 65 YLAQKSERIVGLHEIYETP--HEM--VLVLEMVPDGELQRLVDIQDGIPEQDTRSYMKQI 120
L + E I+G+++I P +M V +++ + + +L +L+ Q + ++ QI
Sbjct: 82 -LRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQH-LSNDHICYFLYQI 139
Query: 121 LEALAFLHDHNITHLDLKPQNILLTKDNNIKLCDFGISRVVNDVVE----VKEIIGTPDY 176
L L ++H N+ H DLKP N+LL ++K+CDFG++RV + + + E + T Y
Sbjct: 140 LRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWY 199
Query: 177 VAPEV-LSYEPISLATDMWSVGVLAYVLLSSHSPFAGDNKQETFLNI-SQCNFSFHEDLF 234
APE+ L+ + + + D+WSVG + +LS+ F G + + +I EDL
Sbjct: 200 RAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLN 259
Query: 235 GHISSQAKDFIQS 247
I+ +A++++ S
Sbjct: 260 CIINLKARNYLLS 272
>pdb|3C9W|A Chain A, Crystal Structure Of Erk-2 With Hypothemycin Covalently
Bound
pdb|3C9W|B Chain B, Crystal Structure Of Erk-2 With Hypothemycin Covalently
Bound
Length = 357
Score = 77.4 bits (189), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 70/253 (27%), Positives = 122/253 (48%), Gaps = 15/253 (5%)
Query: 5 FFVNGGYQTLIFCMPSRGKFASVRKCTHKITKVEYAAKFIRKRRRSMDQMQDILHEAAVL 64
F V Y L + G + V + KV A K I Q L E +L
Sbjct: 16 FDVGPRYTNLSYI--GEGAYGMVCSAYDNLNKVRVAIKKISPFEHQT-YCQRTLREIKIL 72
Query: 65 YLAQKSERIVGLHEIYETP--HEM--VLVLEMVPDGELQRLVDIQDGIPEQDTRSYMKQI 120
L + E I+G+++I P +M V +++ + + +L +L+ Q + ++ QI
Sbjct: 73 -LRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQH-LSNDHICYFLYQI 130
Query: 121 LEALAFLHDHNITHLDLKPQNILLTKDNNIKLCDFGISRVVNDVVE----VKEIIGTPDY 176
L L ++H N+ H DLKP N+LL ++K+CDFG++RV + + + E + T Y
Sbjct: 131 LRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWY 190
Query: 177 VAPEV-LSYEPISLATDMWSVGVLAYVLLSSHSPFAGDNKQETFLNI-SQCNFSFHEDLF 234
APE+ L+ + + + D+WSVG + +LS+ F G + + +I EDL
Sbjct: 191 RAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLN 250
Query: 235 GHISSQAKDFIQS 247
I+ +A++++ S
Sbjct: 251 CIINLKARNYLLS 263
>pdb|2FYS|B Chain B, Crystal Structure Of Erk2 Complex With Kim Peptide Derived
From Mkp3
pdb|2FYS|A Chain A, Crystal Structure Of Erk2 Complex With Kim Peptide Derived
From Mkp3
pdb|1ERK|A Chain A, Structure Of Signal-Regulated Kinase
pdb|3ERK|A Chain A, The Complex Structure Of The Map Kinase Erk2SB220025
pdb|4ERK|A Chain A, The Complex Structure Of The Map Kinase Erk2OLOMOUCINE
pdb|3QYI|A Chain A, Map Kinase Erk2 Complexed With
1,1-Dioxo-2,3-Dihydrothiophen-3-Yl Benzenesulfonate
Length = 364
Score = 77.4 bits (189), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 70/253 (27%), Positives = 122/253 (48%), Gaps = 15/253 (5%)
Query: 5 FFVNGGYQTLIFCMPSRGKFASVRKCTHKITKVEYAAKFIRKRRRSMDQMQDILHEAAVL 64
F V Y L + G + V + KV A K I Q L E +L
Sbjct: 23 FDVGPRYTNLSYI--GEGAYGMVCSAYDNLNKVRVAIKKISPFEHQT-YCQRTLREIKIL 79
Query: 65 YLAQKSERIVGLHEIYETP--HEM--VLVLEMVPDGELQRLVDIQDGIPEQDTRSYMKQI 120
L + E I+G+++I P +M V +++ + + +L +L+ Q + ++ QI
Sbjct: 80 -LRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQH-LSNDHICYFLYQI 137
Query: 121 LEALAFLHDHNITHLDLKPQNILLTKDNNIKLCDFGISRVVNDVVE----VKEIIGTPDY 176
L L ++H N+ H DLKP N+LL ++K+CDFG++RV + + + E + T Y
Sbjct: 138 LRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWY 197
Query: 177 VAPEV-LSYEPISLATDMWSVGVLAYVLLSSHSPFAGDNKQETFLNI-SQCNFSFHEDLF 234
APE+ L+ + + + D+WSVG + +LS+ F G + + +I EDL
Sbjct: 198 RAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLN 257
Query: 235 GHISSQAKDFIQS 247
I+ +A++++ S
Sbjct: 258 CIINLKARNYLLS 270
>pdb|3O71|A Chain A, Crystal Structure Of Erk2DCC PEPTIDE COMPLEX
Length = 358
Score = 77.4 bits (189), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 70/253 (27%), Positives = 122/253 (48%), Gaps = 15/253 (5%)
Query: 5 FFVNGGYQTLIFCMPSRGKFASVRKCTHKITKVEYAAKFIRKRRRSMDQMQDILHEAAVL 64
F V Y L + G + V + KV A K I Q L E +L
Sbjct: 17 FDVGPRYTNLSYI--GEGAYGMVCSAYDNLNKVRVAIKKISPFEHQT-YCQRTLREIKIL 73
Query: 65 YLAQKSERIVGLHEIYETP--HEM--VLVLEMVPDGELQRLVDIQDGIPEQDTRSYMKQI 120
L + E I+G+++I P +M V +++ + + +L +L+ Q + ++ QI
Sbjct: 74 -LRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQH-LSNDHICYFLYQI 131
Query: 121 LEALAFLHDHNITHLDLKPQNILLTKDNNIKLCDFGISRVVNDVVE----VKEIIGTPDY 176
L L ++H N+ H DLKP N+LL ++K+CDFG++RV + + + E + T Y
Sbjct: 132 LRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWY 191
Query: 177 VAPEV-LSYEPISLATDMWSVGVLAYVLLSSHSPFAGDNKQETFLNI-SQCNFSFHEDLF 234
APE+ L+ + + + D+WSVG + +LS+ F G + + +I EDL
Sbjct: 192 RAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLN 251
Query: 235 GHISSQAKDFIQS 247
I+ +A++++ S
Sbjct: 252 CIINLKARNYLLS 264
>pdb|2X7F|A Chain A, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|B Chain B, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|C Chain C, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|D Chain D, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|E Chain E, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
Length = 326
Score = 77.4 bits (189), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 52/176 (29%), Positives = 88/176 (50%), Gaps = 10/176 (5%)
Query: 85 EMVLVLEMVPDGELQRLVDIQDG--IPEQDTRSYMKQILEALAFLHDHNITHLDLKPQNI 142
++ LV+E G + L+ G + E+ ++IL L+ LH H + H D+K QN+
Sbjct: 101 QLWLVMEFCGAGSVTDLIKNTKGNTLKEEWIAYICREILRGLSHLHQHKVIHRDIKGQNV 160
Query: 143 LLTKDNNIKLCDFGISRVVNDVVEVKE-IIGTPDYVAPEVLSYEPISLAT-----DMWSV 196
LLT++ +KL DFG+S ++ V + IGTP ++APEV++ + AT D+WS+
Sbjct: 161 LLTENAEVKLVDFGVSAQLDRTVGRRNTFIGTPYWMAPEVIACDENPDATYDFKSDLWSL 220
Query: 197 GVLAYVLLSSHSPFAGDNKQETFLNISQCNFSFHEDLFGHISSQAKDFIQSCLVTD 252
G+ A + P + I + + S + + FI+SCLV +
Sbjct: 221 GITAIEMAEGAPPLCDMHPMRALFLIPRNPAPRLKS--KKWSKKFQSFIESCLVKN 274
>pdb|3R63|A Chain A, Structure Of Erk2 (Spe) Mutant (S246e)
Length = 358
Score = 77.0 bits (188), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 63/217 (29%), Positives = 106/217 (48%), Gaps = 14/217 (6%)
Query: 5 FFVNGGYQTLIFCMPSRGKFASVRKCTHKITKVEYAAKFIRKRRRSMDQMQDILHEAAVL 64
F V Y L + G + V + KV A K I Q L E +L
Sbjct: 17 FDVGPRYTNLSYI--GEGAYGMVCSAYDNLNKVRVAIKKISPFEHQT-YCQRTLREIKIL 73
Query: 65 YLAQKSERIVGLHEIYETP--HEM--VLVLEMVPDGELQRLVDIQDGIPEQDTRSYMKQI 120
L + E I+G+++I P +M V +++ + + +L +L+ Q + ++ QI
Sbjct: 74 -LRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQH-LSNDHICYFLYQI 131
Query: 121 LEALAFLHDHNITHLDLKPQNILLTKDNNIKLCDFGISRVVNDVVE----VKEIIGTPDY 176
L L ++H N+ H DLKP N+LL ++K+CDFG++RV + + + E + T Y
Sbjct: 132 LRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWY 191
Query: 177 VAPEV-LSYEPISLATDMWSVGVLAYVLLSSHSPFAG 212
APE+ L+ + + + D+WSVG + +LS+ F G
Sbjct: 192 RAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPG 228
>pdb|2JAV|A Chain A, Human Kinase With Pyrrole-Indolinone Ligand
pdb|2W5B|A Chain A, Human Nek2 Kinase Atpgammas-bound
pdb|2W5H|A Chain A, Human Nek2 Kinase Apo
Length = 279
Score = 76.6 bits (187), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 41/117 (35%), Positives = 63/117 (53%), Gaps = 6/117 (5%)
Query: 117 MKQILEALAFLH-----DHNITHLDLKPQNILLTKDNNIKLCDFGISRVVN-DVVEVKEI 170
M Q+ AL H H + H DLKP N+ L N+KL DFG++R++N D K
Sbjct: 117 MTQLTLALKECHRRSDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLARILNHDTSFAKAF 176
Query: 171 IGTPDYVAPEVLSYEPISLATDMWSVGVLAYVLLSSHSPFAGDNKQETFLNISQCNF 227
+GTP Y++PE ++ + +D+WS+G L Y L + PF +++E I + F
Sbjct: 177 VGTPYYMSPEQMNRMSYNEKSDIWSLGCLLYELCALMPPFTAFSQKELAGKIREGKF 233
>pdb|4G3G|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) V408l Bound To A 2-(aminothiazolyl)phenol (cmp3)
Length = 350
Score = 76.6 bits (187), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 55/198 (27%), Positives = 88/198 (44%), Gaps = 15/198 (7%)
Query: 20 SRGKFASVRKCTHKITKVEYAAKFIRKRRRSMDQMQDILHEAAVLYLAQKSERIVGLHEI 79
RG F V + K T + A K +R ++ E V S RIV L+
Sbjct: 81 GRGSFGEVHRMKDKQTGFQCAVKKVR--------LEVFRVEELVACAGLSSPRIVPLYGA 132
Query: 80 YETPHEMVLVLEMVPDGELQRLVDIQDGIPEQDTRSYMKQILEALAFLHDHNITHLDLKP 139
+ + +E++ G L +L+ +PE Y+ Q LE L +LH I H D+K
Sbjct: 133 VREGPWVNIFMELLEGGSLGQLIKQMGCLPEDRALYYLGQALEGLEYLHTRRILHGDVKA 192
Query: 140 QNILLTKDNN-IKLCDFGISRVV------NDVVEVKEIIGTPDYVAPEVLSYEPISLATD 192
N+LL+ D + LCDFG + + ++ I GT ++APEV+ +P D
Sbjct: 193 DNVLLSSDGSRAALCDFGHALCLQPDGLGKSLLTGDYIPGTETHMAPEVVMGKPCDAKVD 252
Query: 193 MWSVGVLAYVLLSSHSPF 210
+WS + +L+ P+
Sbjct: 253 IWSSCCMMLHMLNGCHPW 270
>pdb|2W5A|A Chain A, Human Nek2 Kinase Adp-Bound
pdb|2WQO|A Chain A, Structure Of Nek2 Bound To The Aminopyridine Cct241950
pdb|2XK3|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 35
pdb|2XK4|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 17
pdb|2XK6|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 36
pdb|2XK7|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 23
pdb|2XK8|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 15
pdb|2XKC|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 14
pdb|2XKD|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 12
pdb|2XKF|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 2
pdb|2XKE|A Chain A, Structure Of Nek2 Bound To Aminipyrazine Compound 5
pdb|2XNM|A Chain A, Structure Of Nek2 Bound To Cct
pdb|2XNN|A Chain A, Structure Of Nek2 Bound To Cct242430
pdb|2XNO|A Chain A, Structure Of Nek2 Bound To Cct243779
pdb|2XNP|A Chain A, Structure Of Nek2 Bound To Cct244858
pdb|4AFE|A Chain A, Nek2 Bound To Hybrid Compound 21
Length = 279
Score = 76.6 bits (187), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 41/117 (35%), Positives = 63/117 (53%), Gaps = 6/117 (5%)
Query: 117 MKQILEALAFLH-----DHNITHLDLKPQNILLTKDNNIKLCDFGISRVVN-DVVEVKEI 170
M Q+ AL H H + H DLKP N+ L N+KL DFG++R++N D K
Sbjct: 117 MTQLTLALKECHRRSDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLARILNHDTSFAKTF 176
Query: 171 IGTPDYVAPEVLSYEPISLATDMWSVGVLAYVLLSSHSPFAGDNKQETFLNISQCNF 227
+GTP Y++PE ++ + +D+WS+G L Y L + PF +++E I + F
Sbjct: 177 VGTPYYMSPEQMNRMSYNEKSDIWSLGCLLYELCALMPPFTAFSQKELAGKIREGKF 233
>pdb|4G3F|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 2-(aminothiazoly)phenol (cmp2)
Length = 336
Score = 76.6 bits (187), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 55/198 (27%), Positives = 88/198 (44%), Gaps = 15/198 (7%)
Query: 20 SRGKFASVRKCTHKITKVEYAAKFIRKRRRSMDQMQDILHEAAVLYLAQKSERIVGLHEI 79
RG F V + K T + A K +R ++ E V S RIV L+
Sbjct: 67 GRGSFGEVHRMKDKQTGFQCAVKKVR--------LEVFRVEELVACAGLSSPRIVPLYGA 118
Query: 80 YETPHEMVLVLEMVPDGELQRLVDIQDGIPEQDTRSYMKQILEALAFLHDHNITHLDLKP 139
+ + +E++ G L +L+ +PE Y+ Q LE L +LH I H D+K
Sbjct: 119 VREGPWVNIFMELLEGGSLGQLIKQMGCLPEDRALYYLGQALEGLEYLHTRRILHGDVKA 178
Query: 140 QNILLTKDNN-IKLCDFGISRVV------NDVVEVKEIIGTPDYVAPEVLSYEPISLATD 192
N+LL+ D + LCDFG + + ++ I GT ++APEV+ +P D
Sbjct: 179 DNVLLSSDGSRAALCDFGHALCLQPDGLGKSLLTGDYIPGTETHMAPEVVMGKPCDAKVD 238
Query: 193 MWSVGVLAYVLLSSHSPF 210
+WS + +L+ P+
Sbjct: 239 IWSSCCMMLHMLNGCHPW 256
>pdb|3KGA|A Chain A, Crystal Structure Of Mapkap Kinase 2 (Mk2) Complexed With
A Potent 3-Aminopyrazole Atp Site Inhibitor
pdb|3M2W|A Chain A, Crystal Structure Of Mapkak Kinase 2 (Mk2) Complexed With
A Spiroazetidine-Tetracyclic Atp Site Inhibitor
pdb|3M42|A Chain A, Crystal Structure Of Mapkap Kinase 2 (Mk2) Complexed With
A Tetracyclic Atp Site Inhibitor
Length = 299
Score = 76.6 bits (187), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 62/194 (31%), Positives = 96/194 (49%), Gaps = 35/194 (18%)
Query: 72 RIVGLHE-IYETPHEMVLVLEMVPDGEL-QRLVDIQD-GIPEQDTRSYMKQILEALAFLH 128
RIV ++E +Y +++V+E + GEL R+ D D E++ MK I EA+ +LH
Sbjct: 75 RIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLH 134
Query: 129 DHNITHLDLKPQNILLT--KDNNI-KLCDFGISRVVNDVVEVKEIIGTPDYVAPEVLSYE 185
NI H D+KP+N+L T + N I KL DFG + KE G E
Sbjct: 135 SINIAHRDVKPENLLYTSKRPNAILKLTDFGFA---------KETTG------------E 173
Query: 186 PISLATDMWSVGVLAYVLLSSHSPFAGDN------KQETFLNISQCNFSFHEDLFGHISS 239
+ DMWS+GV+ Y+LL + PF ++ +T + + Q F E + +S
Sbjct: 174 KYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQYEFPNPE--WSEVSE 231
Query: 240 QAKDFIQSCLVTDP 253
+ K I++ L T+P
Sbjct: 232 EVKMLIRNLLKTEP 245
>pdb|1GOL|A Chain A, Coordinates Of Rat Map Kinase Erk2 With An Arginine
Mutation At Position 52
Length = 364
Score = 76.6 bits (187), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 69/253 (27%), Positives = 122/253 (48%), Gaps = 15/253 (5%)
Query: 5 FFVNGGYQTLIFCMPSRGKFASVRKCTHKITKVEYAAKFIRKRRRSMDQMQDILHEAAVL 64
F V Y L + G + V + KV A + I Q L E +L
Sbjct: 23 FDVGPRYTNLSYI--GEGAYGMVCSAYDNLNKVRVAIRKISPFEHQT-YCQRTLREIKIL 79
Query: 65 YLAQKSERIVGLHEIYETP--HEM--VLVLEMVPDGELQRLVDIQDGIPEQDTRSYMKQI 120
L + E I+G+++I P +M V +++ + + +L +L+ Q + ++ QI
Sbjct: 80 -LRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQH-LSNDHICYFLYQI 137
Query: 121 LEALAFLHDHNITHLDLKPQNILLTKDNNIKLCDFGISRVVNDVVE----VKEIIGTPDY 176
L L ++H N+ H DLKP N+LL ++K+CDFG++RV + + + E + T Y
Sbjct: 138 LRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWY 197
Query: 177 VAPEV-LSYEPISLATDMWSVGVLAYVLLSSHSPFAGDNKQETFLNI-SQCNFSFHEDLF 234
APE+ L+ + + + D+WSVG + +LS+ F G + + +I EDL
Sbjct: 198 RAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLN 257
Query: 235 GHISSQAKDFIQS 247
I+ +A++++ S
Sbjct: 258 CIINLKARNYLLS 270
>pdb|2ZV2|A Chain A, Crystal Structure Of Human CalciumCALMODULIN-Dependent
Protein Kinase Kinase 2, Beta, Camkk2 Kinase Domain In
Complex With Sto-609
Length = 298
Score = 76.3 bits (186), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 45/145 (31%), Positives = 80/145 (55%), Gaps = 9/145 (6%)
Query: 73 IVGLHEIYETPHE--MVLVLEMVPDGELQRLVDIQDGIPEQDTRSYMKQILEALAFLHDH 130
+V L E+ + P+E + +V E+V G + + ++ + E R Y + +++ + +LH
Sbjct: 98 VVKLVEVLDDPNEDHLYMVFELVNQGPVMEVPTLKP-LSEDQARFYFQDLIKGIEYLHYQ 156
Query: 131 NITHLDLKPQNILLTKDNNIKLCDFGISRVV--NDVVEVKEIIGTPDYVAPEVLSYEP-- 186
I H D+KP N+L+ +D +IK+ DFG+S +D + + +GTP ++APE LS
Sbjct: 157 KIIHRDIKPSNLLVGEDGHIKIADFGVSNEFKGSDAL-LSNTVGTPAFMAPESLSETRKI 215
Query: 187 -ISLATDMWSVGVLAYVLLSSHSPF 210
A D+W++GV Y + PF
Sbjct: 216 FSGKALDVWAMGVTLYCFVFGQCPF 240
>pdb|4G3C|A Chain A, Crystal Structure Of Apo Murine Nf-kappab Inducing Kinase
(nik)
pdb|4G3C|B Chain B, Crystal Structure Of Apo Murine Nf-kappab Inducing Kinase
(nik)
pdb|4G3E|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 6-alkynylindoline (cmp1)
pdb|4G3E|B Chain B, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 6-alkynylindoline (cmp1)
Length = 352
Score = 75.9 bits (185), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 55/198 (27%), Positives = 88/198 (44%), Gaps = 15/198 (7%)
Query: 20 SRGKFASVRKCTHKITKVEYAAKFIRKRRRSMDQMQDILHEAAVLYLAQKSERIVGLHEI 79
RG F V + K T + A K +R ++ E V S RIV L+
Sbjct: 83 GRGSFGEVHRMKDKQTGFQCAVKKVR--------LEVFRVEELVACAGLSSPRIVPLYGA 134
Query: 80 YETPHEMVLVLEMVPDGELQRLVDIQDGIPEQDTRSYMKQILEALAFLHDHNITHLDLKP 139
+ + +E++ G L +L+ +PE Y+ Q LE L +LH I H D+K
Sbjct: 135 VREGPWVNIFMELLEGGSLGQLIKQMGCLPEDRALYYLGQALEGLEYLHTRRILHGDVKA 194
Query: 140 QNILLTKDNN-IKLCDFGISRVV------NDVVEVKEIIGTPDYVAPEVLSYEPISLATD 192
N+LL+ D + LCDFG + + ++ I GT ++APEV+ +P D
Sbjct: 195 DNVLLSSDGSRAALCDFGHALCLQPDGLGKSLLTGDYIPGTETHMAPEVVMGKPCDAKVD 254
Query: 193 MWSVGVLAYVLLSSHSPF 210
+WS + +L+ P+
Sbjct: 255 IWSSCCMMLHMLNGCHPW 272
>pdb|2Y8O|A Chain A, Crystal Structure Of Human P38alpha Complexed With A Mapk
Docking Peptide
Length = 362
Score = 75.9 bits (185), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 61/233 (26%), Positives = 115/233 (49%), Gaps = 11/233 (4%)
Query: 22 GKFASVRKCTHKITKVEYAAKFIRKRRRSMDQMQDILHEAAVLYLAQKSERIVGLHEIYE 81
G + SV T + A K + + +S+ + E +L K E ++GL +++
Sbjct: 35 GAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLK-HMKHENVIGLLDVFT 93
Query: 82 TPHEM-----VLVLEMVPDGELQRLVDIQDGIPEQDTRSYMKQILEALAFLHDHNITHLD 136
+ V ++ + +L +V Q + + + + QIL L ++H +I H D
Sbjct: 94 PARSLEEFNDVYLVTHLMGADLNNIVKCQK-LTDDHVQFLIYQILRGLKYIHSADIIHRD 152
Query: 137 LKPQNILLTKDNNIKLCDFGISRVVNDVVEVKEIIGTPDYVAPEV-LSYEPISLATDMWS 195
LKP N+ + +D+ +K+ DFG++R +D E+ + T Y APE+ L++ + D+WS
Sbjct: 153 LKPSNLAVNEDSELKILDFGLARHTDD--EMTGYVATRWYRAPEIMLNWMHYNQTVDIWS 210
Query: 196 VGVLAYVLLSSHSPFAGDNKQETFLNISQCNFSFHEDLFGHISSQ-AKDFIQS 247
VG + LL+ + F G + + I + + +L ISS+ A+++IQS
Sbjct: 211 VGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQS 263
>pdb|1OVE|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydroquinolinone
pdb|1R3C|A Chain A, The Structure Of P38alpha C162s Mutant
pdb|2I0H|A Chain A, The Structure Of P38alpha In Complex With An
Arylpyridazinone
pdb|3GC7|A Chain A, The Structure Of P38alpha In Complex With A
Dihydroquinazolinone
pdb|3NEW|A Chain A, P38-Alpha Complexed With Compound 10
Length = 366
Score = 75.9 bits (185), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 61/233 (26%), Positives = 115/233 (49%), Gaps = 11/233 (4%)
Query: 22 GKFASVRKCTHKITKVEYAAKFIRKRRRSMDQMQDILHEAAVLYLAQKSERIVGLHEIYE 81
G + SV T + A K + + +S+ + E +L K E ++GL +++
Sbjct: 39 GAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLK-HMKHENVIGLLDVFT 97
Query: 82 TPHEM-----VLVLEMVPDGELQRLVDIQDGIPEQDTRSYMKQILEALAFLHDHNITHLD 136
+ V ++ + +L +V Q + + + + QIL L ++H +I H D
Sbjct: 98 PARSLEEFNDVYLVTHLMGADLNNIVKCQK-LTDDHVQFLIYQILRGLKYIHSADIIHRD 156
Query: 137 LKPQNILLTKDNNIKLCDFGISRVVNDVVEVKEIIGTPDYVAPEV-LSYEPISLATDMWS 195
LKP N+ + +D+ +K+ DFG++R +D E+ + T Y APE+ L++ + D+WS
Sbjct: 157 LKPSNLAVNEDSELKILDFGLARHTDD--EMTGYVATRWYRAPEIMLNWMHYNQTVDIWS 214
Query: 196 VGVLAYVLLSSHSPFAGDNKQETFLNISQCNFSFHEDLFGHISSQ-AKDFIQS 247
VG + LL+ + F G + + I + + +L ISS+ A+++IQS
Sbjct: 215 VGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQS 267
>pdb|3FI4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro4499
pdb|3FKO|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3668
pdb|3FLN|C Chain C, P38 Kinase Crystal Structure In Complex With R1487
Length = 372
Score = 75.9 bits (185), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 62/233 (26%), Positives = 114/233 (48%), Gaps = 11/233 (4%)
Query: 22 GKFASVRKCTHKITKVEYAAKFIRKRRRSMDQMQDILHEAAVLYLAQKSERIVGLHEIYE 81
G + SV T + A K + K +S+ + E +L K E ++GL +++
Sbjct: 45 GAYGSVCAAFDTKTGLRVAVKKLSKPFQSIIHAKRTYRELRLLK-HMKHENVIGLLDVFT 103
Query: 82 TPHEM-----VLVLEMVPDGELQRLVDIQDGIPEQDTRSYMKQILEALAFLHDHNITHLD 136
+ V ++ + +L +V Q + + + + QIL L ++H +I H D
Sbjct: 104 PARSLEEFNDVYLVTHLMGADLNNIVKCQK-LTDDHVQFLIYQILRGLKYIHSADIIHRD 162
Query: 137 LKPQNILLTKDNNIKLCDFGISRVVNDVVEVKEIIGTPDYVAPEV-LSYEPISLATDMWS 195
LKP N+ + +D +K+ DFG++R +D E+ + T Y APE+ L++ + D+WS
Sbjct: 163 LKPSNLAVNEDCELKILDFGLARHTDD--EMTGYVATRWYRAPEIMLNWMHYNQTVDIWS 220
Query: 196 VGVLAYVLLSSHSPFAGDNKQETFLNISQCNFSFHEDLFGHISSQ-AKDFIQS 247
VG + LL+ + F G + + I + + +L ISS+ A+++IQS
Sbjct: 221 VGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQS 273
>pdb|4DN5|A Chain A, Crystal Structure Of Nf-kb-inducing Kinase (nik)
pdb|4DN5|B Chain B, Crystal Structure Of Nf-kb-inducing Kinase (nik)
Length = 356
Score = 75.9 bits (185), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 56/198 (28%), Positives = 88/198 (44%), Gaps = 15/198 (7%)
Query: 20 SRGKFASVRKCTHKITKVEYAAKFIRKRRRSMDQMQDILHEAAVLYLAQKSERIVGLHEI 79
RG F V + K T + A K +R ++ E + S RIV L+
Sbjct: 83 GRGSFGEVHRMEDKQTGFQCAVKKVR--------LEVFRAEELMACAGLTSPRIVPLYGA 134
Query: 80 YETPHEMVLVLEMVPDGELQRLVDIQDGIPEQDTRSYMKQILEALAFLHDHNITHLDLKP 139
+ + +E++ G L +LV Q +PE Y+ Q LE L +LH I H D+K
Sbjct: 135 VREGPWVNIFMELLEGGSLGQLVKEQGCLPEDRALYYLGQALEGLEYLHSRRILHGDVKA 194
Query: 140 QNILLTKDNN-IKLCDFGISRVV------NDVVEVKEIIGTPDYVAPEVLSYEPISLATD 192
N+LL+ D + LCDFG + + D++ I GT ++APEV+ D
Sbjct: 195 DNVLLSSDGSHAALCDFGHAVCLQPDGLGKDLLTGDYIPGTETHMAPEVVLGRSCDAKVD 254
Query: 193 MWSVGVLAYVLLSSHSPF 210
+WS + +L+ P+
Sbjct: 255 VWSSCCMMLHMLNGCHPW 272
>pdb|1U5Q|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5Q|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
Length = 348
Score = 75.5 bits (184), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 62/225 (27%), Positives = 103/225 (45%), Gaps = 19/225 (8%)
Query: 34 ITKVEYAAKFIRKRRRSMDQMQDILHEAAVLYLAQ-KSERIVGLHEIYETPHEMVLVLEM 92
I K+ Y+ K +S ++ QDI+ E V +L + + + Y H LV+E
Sbjct: 84 IKKMSYSGK------QSNEKWQDIIKE--VRFLQKLRHPNTIQYRGCYLREHTAWLVMEY 135
Query: 93 VPDGELQRLVDI-QDGIPEQDTRSYMKQILEALAFLHDHNITHLDLKPQNILLTKDNNIK 151
G L+++ + + E + + L+ LA+LH HN+ H D+K NILL++ +K
Sbjct: 136 CL-GSASDLLEVHKKPLQEVEIAAVTHGALQGLAYLHSHNMIHRDVKAGNILLSEPGLVK 194
Query: 152 LCDFGISRVVNDVVEVKEIIGTPDYVAPEV---LSYEPISLATDMWSVGVLAYVLLSSHS 208
L DFG + + + +GTP ++APEV + D+WS+G+ L
Sbjct: 195 LGDFGSASI---MAPANXFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKP 251
Query: 209 PFAGDNKQETFLNISQCNFSFHEDLFGHISSQAKDFIQSCLVTDP 253
P N +I+Q + GH S ++F+ SCL P
Sbjct: 252 PLFNMNAMSALYHIAQNESPALQS--GHWSEYFRNFVDSCLQKIP 294
>pdb|2GCD|A Chain A, Tao2 Kinase Domain-Staurosporine Structure
pdb|2GCD|B Chain B, Tao2 Kinase Domain-Staurosporine Structure
Length = 309
Score = 75.5 bits (184), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 61/224 (27%), Positives = 100/224 (44%), Gaps = 17/224 (7%)
Query: 34 ITKVEYAAKFIRKRRRSMDQMQDILHEAAVLYLAQKSERIVGLHEIYETPHEMVLVLEMV 93
I K+ Y+ K +S ++ QDI+ E L + + Y H LV+E
Sbjct: 45 IKKMSYSGK------QSNEKWQDIIKEVRFLQ-KLRHPNTIQYRGCYLREHTAWLVMEYC 97
Query: 94 PDGELQRLVDI-QDGIPEQDTRSYMKQILEALAFLHDHNITHLDLKPQNILLTKDNNIKL 152
G L+++ + + E + + L+ LA+LH HN+ H D+K NILL++ +KL
Sbjct: 98 L-GSASDLLEVHKKPLQEVEIAAVTHGALQGLAYLHSHNMIHRDVKAGNILLSEPGLVKL 156
Query: 153 CDFGISRVVNDVVEVKEIIGTPDYVAPEV---LSYEPISLATDMWSVGVLAYVLLSSHSP 209
DFG + + + +GTP ++APEV + D+WS+G+ L P
Sbjct: 157 GDFGSASI---MAPANXFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPP 213
Query: 210 FAGDNKQETFLNISQCNFSFHEDLFGHISSQAKDFIQSCLVTDP 253
N +I+Q + GH S ++F+ SCL P
Sbjct: 214 LFNMNAMSALYHIAQNESPALQS--GHWSEYFRNFVDSCLQKIP 255
>pdb|3E92|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
pdb|3E93|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
Length = 371
Score = 75.5 bits (184), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 61/233 (26%), Positives = 114/233 (48%), Gaps = 11/233 (4%)
Query: 22 GKFASVRKCTHKITKVEYAAKFIRKRRRSMDQMQDILHEAAVLYLAQKSERIVGLHEIYE 81
G + SV T + A K + + +S+ + E +L K E ++GL +++
Sbjct: 44 GAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLK-HMKHENVIGLLDVFT 102
Query: 82 TPHEM-----VLVLEMVPDGELQRLVDIQDGIPEQDTRSYMKQILEALAFLHDHNITHLD 136
+ V ++ + +L +V Q + + + + QIL L ++H +I H D
Sbjct: 103 PARSLEEFNDVYLVTHLMGADLNNIVKCQK-LTDDHVQFLIYQILRGLKYIHSADIIHRD 161
Query: 137 LKPQNILLTKDNNIKLCDFGISRVVNDVVEVKEIIGTPDYVAPEV-LSYEPISLATDMWS 195
LKP N+ + +D +K+ DFG++R +D E+ + T Y APE+ L++ + D+WS
Sbjct: 162 LKPSNLAVNEDXELKILDFGLARHTDD--EMTGYVATRWYRAPEIMLNWMHYNQTVDIWS 219
Query: 196 VGVLAYVLLSSHSPFAGDNKQETFLNISQCNFSFHEDLFGHISSQ-AKDFIQS 247
VG + LL+ + F G + + I + + +L ISS+ A+++IQS
Sbjct: 220 VGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQS 272
>pdb|3K3I|A Chain A, P38alpha Bound To Novel Dgf-Out Compound Pf-00215955
Length = 350
Score = 75.5 bits (184), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 61/233 (26%), Positives = 114/233 (48%), Gaps = 11/233 (4%)
Query: 22 GKFASVRKCTHKITKVEYAAKFIRKRRRSMDQMQDILHEAAVLYLAQKSERIVGLHEIYE 81
G + SV T + A K + + +S+ + E +L K E ++GL +++
Sbjct: 31 GAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLK-HMKHENVIGLLDVFT 89
Query: 82 TPHEM-----VLVLEMVPDGELQRLVDIQDGIPEQDTRSYMKQILEALAFLHDHNITHLD 136
+ V ++ + +L +V Q + + + + QIL L ++H +I H D
Sbjct: 90 PARSLEEFNDVYLVTHLMGADLNNIVKCQK-LTDDHVQFLIYQILRGLKYIHSADIIHRD 148
Query: 137 LKPQNILLTKDNNIKLCDFGISRVVNDVVEVKEIIGTPDYVAPEV-LSYEPISLATDMWS 195
LKP N+ + +D +K+ DFG++R +D E+ + T Y APE+ L++ + D+WS
Sbjct: 149 LKPSNLAVNEDCELKILDFGLARHTDD--EMTGYVATRWYRAPEIMLNWMHYNQTVDIWS 206
Query: 196 VGVLAYVLLSSHSPFAGDNKQETFLNISQCNFSFHEDLFGHISSQ-AKDFIQS 247
VG + LL+ + F G + + I + + +L ISS+ A+++IQS
Sbjct: 207 VGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQS 259
>pdb|3D83|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
pdb|3IPH|A Chain A, Crystal Structure Of P38 In Complex With A Biphenylamide
Inhibitor
Length = 360
Score = 75.5 bits (184), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 61/234 (26%), Positives = 114/234 (48%), Gaps = 11/234 (4%)
Query: 22 GKFASVRKCTHKITKVEYAAKFIRKRRRSMDQMQDILHEAAVLYLAQKSERIVGLHEIYE 81
G + SV T + A K + + +S+ + E +L K E ++GL +++
Sbjct: 33 GAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLK-HMKHENVIGLLDVFT 91
Query: 82 TPHEM-----VLVLEMVPDGELQRLVDIQDGIPEQDTRSYMKQILEALAFLHDHNITHLD 136
+ V ++ + +L +V Q + + + + QIL L ++H +I H D
Sbjct: 92 PARSLEEFNDVYLVTHLMGADLNNIVKXQK-LTDDHVQFLIYQILRGLKYIHSADIIHRD 150
Query: 137 LKPQNILLTKDNNIKLCDFGISRVVNDVVEVKEIIGTPDYVAPEV-LSYEPISLATDMWS 195
LKP N+ + +D +K+ DFG++R +D E+ + T Y APE+ L++ + D+WS
Sbjct: 151 LKPSNLAVNEDXELKILDFGLARHTDD--EMTGYVATRWYRAPEIMLNWMHYNQTVDIWS 208
Query: 196 VGVLAYVLLSSHSPFAGDNKQETFLNISQCNFSFHEDLFGHISSQ-AKDFIQSC 248
VG + LL+ + F G + + I + + +L ISS+ A+++IQS
Sbjct: 209 VGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSL 262
>pdb|2BAQ|A Chain A, P38alpha Bound To Ro3201195
Length = 365
Score = 75.5 bits (184), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 61/233 (26%), Positives = 114/233 (48%), Gaps = 11/233 (4%)
Query: 22 GKFASVRKCTHKITKVEYAAKFIRKRRRSMDQMQDILHEAAVLYLAQKSERIVGLHEIYE 81
G + SV T + A K + + +S+ + E +L K E ++GL +++
Sbjct: 38 GAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLK-HMKHENVIGLLDVFT 96
Query: 82 TPHEM-----VLVLEMVPDGELQRLVDIQDGIPEQDTRSYMKQILEALAFLHDHNITHLD 136
+ V ++ + +L +V Q + + + + QIL L ++H +I H D
Sbjct: 97 PARSLEEFNDVYLVTHLMGADLNNIVKCQK-LTDDHVQFLIYQILRGLKYIHSADIIHRD 155
Query: 137 LKPQNILLTKDNNIKLCDFGISRVVNDVVEVKEIIGTPDYVAPEV-LSYEPISLATDMWS 195
LKP N+ + +D +K+ DFG++R +D E+ + T Y APE+ L++ + D+WS
Sbjct: 156 LKPSNLAVNEDXELKILDFGLARHTDD--EMTGYVATRWYRAPEIMLNWMHYNQTVDIWS 213
Query: 196 VGVLAYVLLSSHSPFAGDNKQETFLNISQCNFSFHEDLFGHISSQ-AKDFIQS 247
VG + LL+ + F G + + I + + +L ISS+ A+++IQS
Sbjct: 214 VGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQS 266
>pdb|2BAL|A Chain A, P38alpha Map Kinase Bound To Pyrazoloamine
pdb|4AA5|A Chain A, P38alpha Map Kinase Bound To Cmpd 33
Length = 365
Score = 75.1 bits (183), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 61/233 (26%), Positives = 114/233 (48%), Gaps = 11/233 (4%)
Query: 22 GKFASVRKCTHKITKVEYAAKFIRKRRRSMDQMQDILHEAAVLYLAQKSERIVGLHEIYE 81
G + SV T + A K + + +S+ + E +L K E ++GL +++
Sbjct: 38 GAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLK-HMKHENVIGLLDVFT 96
Query: 82 TPHEM-----VLVLEMVPDGELQRLVDIQDGIPEQDTRSYMKQILEALAFLHDHNITHLD 136
+ V ++ + +L +V Q + + + + QIL L ++H +I H D
Sbjct: 97 PARSLEEFNDVYLVTHLMGADLNNIVKCQK-LTDDHVQFLIYQILRGLKYIHSADIIHRD 155
Query: 137 LKPQNILLTKDNNIKLCDFGISRVVNDVVEVKEIIGTPDYVAPEV-LSYEPISLATDMWS 195
LKP N+ + +D +K+ DFG++R +D E+ + T Y APE+ L++ + D+WS
Sbjct: 156 LKPSNLAVNEDXELKILDFGLARHTDD--EMTGYVATRWYRAPEIMLNWMHYNQTVDIWS 213
Query: 196 VGVLAYVLLSSHSPFAGDNKQETFLNISQCNFSFHEDLFGHISSQ-AKDFIQS 247
VG + LL+ + F G + + I + + +L ISS+ A+++IQS
Sbjct: 214 VGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQS 266
>pdb|1ZZL|A Chain A, Crystal Structure Of P38 With Triazolopyridine
pdb|2YIX|A Chain A, Triazolopyridine Inhibitors Of P38
Length = 351
Score = 75.1 bits (183), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 61/233 (26%), Positives = 114/233 (48%), Gaps = 11/233 (4%)
Query: 22 GKFASVRKCTHKITKVEYAAKFIRKRRRSMDQMQDILHEAAVLYLAQKSERIVGLHEIYE 81
G + SV T + A K + + +S+ + E +L K E ++GL +++
Sbjct: 30 GAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLK-HMKHENVIGLLDVFT 88
Query: 82 TPHEM-----VLVLEMVPDGELQRLVDIQDGIPEQDTRSYMKQILEALAFLHDHNITHLD 136
+ V ++ + +L +V Q + + + + QIL L ++H +I H D
Sbjct: 89 PARSLEEFNDVYLVTHLMGADLNNIVKCQK-LTDDHVQFLIYQILRGLKYIHSADIIHRD 147
Query: 137 LKPQNILLTKDNNIKLCDFGISRVVNDVVEVKEIIGTPDYVAPEV-LSYEPISLATDMWS 195
LKP N+ + +D +K+ DFG++R +D E+ + T Y APE+ L++ + D+WS
Sbjct: 148 LKPSNLAVNEDCELKILDFGLARHTDD--EMTGYVATRWYRAPEIMLNWMHYNQTVDIWS 205
Query: 196 VGVLAYVLLSSHSPFAGDNKQETFLNISQCNFSFHEDLFGHISSQ-AKDFIQS 247
VG + LL+ + F G + + I + + +L ISS+ A+++IQS
Sbjct: 206 VGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQS 258
>pdb|3HEC|A Chain A, P38 In Complex With Imatinib
pdb|3HEG|A Chain A, P38 In Complex With Sorafenib
Length = 348
Score = 75.1 bits (183), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 61/233 (26%), Positives = 114/233 (48%), Gaps = 11/233 (4%)
Query: 22 GKFASVRKCTHKITKVEYAAKFIRKRRRSMDQMQDILHEAAVLYLAQKSERIVGLHEIYE 81
G + SV T + A K + + +S+ + E +L K E ++GL +++
Sbjct: 29 GAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLK-HMKHENVIGLLDVFT 87
Query: 82 TPHEM-----VLVLEMVPDGELQRLVDIQDGIPEQDTRSYMKQILEALAFLHDHNITHLD 136
+ V ++ + +L +V Q + + + + QIL L ++H +I H D
Sbjct: 88 PARSLEEFNDVYLVTHLMGADLNNIVKCQK-LTDDHVQFLIYQILRGLKYIHSADIIHRD 146
Query: 137 LKPQNILLTKDNNIKLCDFGISRVVNDVVEVKEIIGTPDYVAPEV-LSYEPISLATDMWS 195
LKP N+ + +D +K+ DFG++R +D E+ + T Y APE+ L++ + D+WS
Sbjct: 147 LKPSNLAVNEDCELKILDFGLARHTDD--EMTGYVATRWYRAPEIMLNWMHYNQTVDIWS 204
Query: 196 VGVLAYVLLSSHSPFAGDNKQETFLNISQCNFSFHEDLFGHISSQ-AKDFIQS 247
VG + LL+ + F G + + I + + +L ISS+ A+++IQS
Sbjct: 205 VGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQS 257
>pdb|3NNX|A Chain A, Crystal Structure Of Phosphorylated P38 Alpha In Complex
With Dp802
Length = 354
Score = 75.1 bits (183), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 61/233 (26%), Positives = 114/233 (48%), Gaps = 11/233 (4%)
Query: 22 GKFASVRKCTHKITKVEYAAKFIRKRRRSMDQMQDILHEAAVLYLAQKSERIVGLHEIYE 81
G + SV T + A K + + +S+ + E +L K E ++GL +++
Sbjct: 33 GAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLK-HMKHENVIGLLDVFT 91
Query: 82 TPHEM-----VLVLEMVPDGELQRLVDIQDGIPEQDTRSYMKQILEALAFLHDHNITHLD 136
+ V ++ + +L +V Q + + + + QIL L ++H +I H D
Sbjct: 92 PARSLEEFNDVYLVTHLMGADLNNIVKCQK-LTDDHVQFLIYQILRGLKYIHSADIIHRD 150
Query: 137 LKPQNILLTKDNNIKLCDFGISRVVNDVVEVKEIIGTPDYVAPEV-LSYEPISLATDMWS 195
LKP N+ + +D +K+ DFG++R +D E+ + T Y APE+ L++ + D+WS
Sbjct: 151 LKPSNLAVNEDCELKILDFGLARHTDD--EMTGXVATRWYRAPEIMLNWMHYNQTVDIWS 208
Query: 196 VGVLAYVLLSSHSPFAGDNKQETFLNISQCNFSFHEDLFGHISSQ-AKDFIQS 247
VG + LL+ + F G + + I + + +L ISS+ A+++IQS
Sbjct: 209 VGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQS 261
>pdb|3S3I|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
Length = 349
Score = 75.1 bits (183), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 61/233 (26%), Positives = 114/233 (48%), Gaps = 11/233 (4%)
Query: 22 GKFASVRKCTHKITKVEYAAKFIRKRRRSMDQMQDILHEAAVLYLAQKSERIVGLHEIYE 81
G + SV T + A K + + +S+ + E +L K E ++GL +++
Sbjct: 30 GAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLK-HMKHENVIGLLDVFT 88
Query: 82 TPHEM-----VLVLEMVPDGELQRLVDIQDGIPEQDTRSYMKQILEALAFLHDHNITHLD 136
+ V ++ + +L +V Q + + + + QIL L ++H +I H D
Sbjct: 89 PARSLEEFNDVYLVTHLMGADLNNIVKCQK-LTDDHVQFLIYQILRGLKYIHSADIIHRD 147
Query: 137 LKPQNILLTKDNNIKLCDFGISRVVNDVVEVKEIIGTPDYVAPEV-LSYEPISLATDMWS 195
LKP N+ + +D +K+ DFG++R +D E+ + T Y APE+ L++ + D+WS
Sbjct: 148 LKPSNLAVNEDCELKILDFGLARHTDD--EMTGYVATRWYRAPEIMLNWMHYNQTVDIWS 205
Query: 196 VGVLAYVLLSSHSPFAGDNKQETFLNISQCNFSFHEDLFGHISSQ-AKDFIQS 247
VG + LL+ + F G + + I + + +L ISS+ A+++IQS
Sbjct: 206 VGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQS 258
>pdb|3NNU|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp1376
pdb|3NNV|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp437
pdb|3NNW|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp802
Length = 354
Score = 75.1 bits (183), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 61/233 (26%), Positives = 114/233 (48%), Gaps = 11/233 (4%)
Query: 22 GKFASVRKCTHKITKVEYAAKFIRKRRRSMDQMQDILHEAAVLYLAQKSERIVGLHEIYE 81
G + SV T + A K + + +S+ + E +L K E ++GL +++
Sbjct: 33 GAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLK-HMKHENVIGLLDVFT 91
Query: 82 TPHEM-----VLVLEMVPDGELQRLVDIQDGIPEQDTRSYMKQILEALAFLHDHNITHLD 136
+ V ++ + +L +V Q + + + + QIL L ++H +I H D
Sbjct: 92 PARSLEEFNDVYLVTHLMGADLNNIVKCQK-LTDDHVQFLIYQILRGLKYIHSADIIHRD 150
Query: 137 LKPQNILLTKDNNIKLCDFGISRVVNDVVEVKEIIGTPDYVAPEV-LSYEPISLATDMWS 195
LKP N+ + +D +K+ DFG++R +D E+ + T Y APE+ L++ + D+WS
Sbjct: 151 LKPSNLAVNEDCELKILDFGLARHTDD--EMTGYVATRWYRAPEIMLNWMHYNQTVDIWS 208
Query: 196 VGVLAYVLLSSHSPFAGDNKQETFLNISQCNFSFHEDLFGHISSQ-AKDFIQS 247
VG + LL+ + F G + + I + + +L ISS+ A+++IQS
Sbjct: 209 VGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQS 261
>pdb|2LGC|A Chain A, Joint Nmr And X-Ray Refinement Reveals The Structure Of A
Novel Dibenzo[a,D]cycloheptenone InhibitorP38 MAP KINASE
COMPLEX IN Solution
Length = 359
Score = 75.1 bits (183), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 61/233 (26%), Positives = 114/233 (48%), Gaps = 11/233 (4%)
Query: 22 GKFASVRKCTHKITKVEYAAKFIRKRRRSMDQMQDILHEAAVLYLAQKSERIVGLHEIYE 81
G + SV T + A K + + +S+ + E +L K E ++GL +++
Sbjct: 38 GAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLK-HMKHENVIGLLDVFT 96
Query: 82 TPHEM-----VLVLEMVPDGELQRLVDIQDGIPEQDTRSYMKQILEALAFLHDHNITHLD 136
+ V ++ + +L +V Q + + + + QIL L ++H +I H D
Sbjct: 97 PARSLEEFNDVYLVTHLMGADLNNIVKCQK-LTDDHVQFLIYQILRGLKYIHSADIIHRD 155
Query: 137 LKPQNILLTKDNNIKLCDFGISRVVNDVVEVKEIIGTPDYVAPEV-LSYEPISLATDMWS 195
LKP N+ + +D +K+ DFG++R +D E+ + T Y APE+ L++ + D+WS
Sbjct: 156 LKPSNLAVNEDCELKILDFGLARHTDD--EMTGYVATRWYRAPEIMLNWMHYNQTVDIWS 213
Query: 196 VGVLAYVLLSSHSPFAGDNKQETFLNISQCNFSFHEDLFGHISSQ-AKDFIQS 247
VG + LL+ + F G + + I + + +L ISS+ A+++IQS
Sbjct: 214 VGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQS 266
>pdb|3GCU|A Chain A, Human P38 Map Kinase In Complex With Rl48
pdb|3GCU|B Chain B, Human P38 Map Kinase In Complex With Rl48
pdb|3HV4|A Chain A, Human P38 Map Kinase In Complex With Rl51
pdb|3HV4|B Chain B, Human P38 Map Kinase In Complex With Rl51
pdb|3HV5|A Chain A, Human P38 Map Kinase In Complex With Rl24
pdb|3HV5|B Chain B, Human P38 Map Kinase In Complex With Rl24
pdb|3HV6|A Chain A, Human P38 Map Kinase In Complex With Rl39
pdb|3HV7|A Chain A, Human P38 Map Kinase In Complex With Rl38
pdb|3HUC|A Chain A, Human P38 Map Kinase In Complex With Rl40
pdb|3LFA|A Chain A, Human P38 Map Kinase In Complex With Dasatinib
pdb|3QUE|A Chain A, Human P38 Map Kinase In Complex With Skepinone-L
pdb|3QUD|A Chain A, Human P38 Map Kinase In Complex With
2-Amino-Phenylamino-Benzophenone
pdb|3UVP|A Chain A, Human P38 Map Kinase In Complex With A Benzamide
Substituted Benzosuberone
pdb|3UVQ|A Chain A, Human P38 Map Kinase In Complex With A Dibenzosuberone
Derivative
pdb|4EH2|A Chain A, Human P38 Map Kinase In Complex With Np-F1 And Rl87
pdb|4EH3|A Chain A, Human P38 Map Kinase In Complex With Np-F2 And Rl87
pdb|4EH4|A Chain A, Human P38 Map Kinase In Complex With Np-F3 And Rl87
pdb|4EH5|A Chain A, Human P38 Map Kinase In Complex With Np-F4 And Rl87
pdb|4EH6|A Chain A, Human P38 Map Kinase In Complex With Np-F5 And Rl87
pdb|4EH7|A Chain A, Human P38 Map Kinase In Complex With Np-F6 And Rl87
pdb|4EH8|A Chain A, Human P38 Map Kinase In Complex With Np-F7 And Rl87
pdb|4EH9|A Chain A, Human P38 Map Kinase In Complex With Np-F11 And Rl87
pdb|4EHV|A Chain A, Human P38 Map Kinase In Complex With Np-F10 And Rl87
pdb|3UVR|A Chain A, Human P38 Map Kinase In Complex With Km064
pdb|4DLI|A Chain A, Human P38 Map Kinase In Complex With Rl87
pdb|4DLJ|A Chain A, Human P38 Map Kinase In Complex With Rl163
Length = 360
Score = 75.1 bits (183), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 61/233 (26%), Positives = 114/233 (48%), Gaps = 11/233 (4%)
Query: 22 GKFASVRKCTHKITKVEYAAKFIRKRRRSMDQMQDILHEAAVLYLAQKSERIVGLHEIYE 81
G + SV T + A K + + +S+ + E +L K E ++GL +++
Sbjct: 33 GAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLK-HMKHENVIGLLDVFT 91
Query: 82 TPHEM-----VLVLEMVPDGELQRLVDIQDGIPEQDTRSYMKQILEALAFLHDHNITHLD 136
+ V ++ + +L +V Q + + + + QIL L ++H +I H D
Sbjct: 92 PARSLEEFNDVYLVTHLMGADLNNIVKCQK-LTDDHVQFLIYQILRGLKYIHSADIIHRD 150
Query: 137 LKPQNILLTKDNNIKLCDFGISRVVNDVVEVKEIIGTPDYVAPEV-LSYEPISLATDMWS 195
LKP N+ + +D +K+ DFG++R +D E+ + T Y APE+ L++ + D+WS
Sbjct: 151 LKPSNLAVNEDCELKILDFGLARHTDD--EMTGYVATRWYRAPEIMLNWMHYNQTVDIWS 208
Query: 196 VGVLAYVLLSSHSPFAGDNKQETFLNISQCNFSFHEDLFGHISSQ-AKDFIQS 247
VG + LL+ + F G + + I + + +L ISS+ A+++IQS
Sbjct: 209 VGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQS 261
>pdb|3K3J|A Chain A, P38alpha Bound To Novel Dfg-Out Compound Pf-00416121
Length = 362
Score = 75.1 bits (183), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 61/233 (26%), Positives = 114/233 (48%), Gaps = 11/233 (4%)
Query: 22 GKFASVRKCTHKITKVEYAAKFIRKRRRSMDQMQDILHEAAVLYLAQKSERIVGLHEIYE 81
G + SV T + A K + + +S+ + E +L K E ++GL +++
Sbjct: 35 GAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLK-HMKHENVIGLLDVFT 93
Query: 82 TPHEM-----VLVLEMVPDGELQRLVDIQDGIPEQDTRSYMKQILEALAFLHDHNITHLD 136
+ V ++ + +L +V Q + + + + QIL L ++H +I H D
Sbjct: 94 PARSLEEFNDVYLVTHLMGADLNNIVKCQK-LTDDHVQFLIYQILRGLKYIHSADIIHRD 152
Query: 137 LKPQNILLTKDNNIKLCDFGISRVVNDVVEVKEIIGTPDYVAPEV-LSYEPISLATDMWS 195
LKP N+ + +D +K+ DFG++R +D E+ + T Y APE+ L++ + D+WS
Sbjct: 153 LKPSNLAVNEDCELKILDFGLARHTDD--EMTGYVATRWYRAPEIMLNWMHYNQTVDIWS 210
Query: 196 VGVLAYVLLSSHSPFAGDNKQETFLNISQCNFSFHEDLFGHISSQ-AKDFIQS 247
VG + LL+ + F G + + I + + +L ISS+ A+++IQS
Sbjct: 211 VGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQS 263
>pdb|3DT1|A Chain A, P38 Complexed With A Quinazoline Inhibitor
Length = 383
Score = 75.1 bits (183), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 61/233 (26%), Positives = 114/233 (48%), Gaps = 11/233 (4%)
Query: 22 GKFASVRKCTHKITKVEYAAKFIRKRRRSMDQMQDILHEAAVLYLAQKSERIVGLHEIYE 81
G + SV T + A K + + +S+ + E +L K E ++GL +++
Sbjct: 56 GAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLK-HMKHENVIGLLDVFT 114
Query: 82 TPHEM-----VLVLEMVPDGELQRLVDIQDGIPEQDTRSYMKQILEALAFLHDHNITHLD 136
+ V ++ + +L +V Q + + + + QIL L ++H +I H D
Sbjct: 115 PARSLEEFNDVYLVTHLMGADLNNIVKCQK-LTDDHVQFLIYQILRGLKYIHSADIIHRD 173
Query: 137 LKPQNILLTKDNNIKLCDFGISRVVNDVVEVKEIIGTPDYVAPEV-LSYEPISLATDMWS 195
LKP N+ + +D +K+ DFG++R +D E+ + T Y APE+ L++ + D+WS
Sbjct: 174 LKPSNLAVNEDCELKILDFGLARHTDD--EMTGYVATRWYRAPEIMLNWMHYNQTVDIWS 231
Query: 196 VGVLAYVLLSSHSPFAGDNKQETFLNISQCNFSFHEDLFGHISSQ-AKDFIQS 247
VG + LL+ + F G + + I + + +L ISS+ A+++IQS
Sbjct: 232 VGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQS 284
>pdb|3HVC|A Chain A, Crystal Structure Of Human P38alpha Map Kinase
Length = 362
Score = 75.1 bits (183), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 61/233 (26%), Positives = 114/233 (48%), Gaps = 11/233 (4%)
Query: 22 GKFASVRKCTHKITKVEYAAKFIRKRRRSMDQMQDILHEAAVLYLAQKSERIVGLHEIYE 81
G + SV T + A K + + +S+ + E +L K E ++GL +++
Sbjct: 35 GAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLK-HMKHENVIGLLDVFT 93
Query: 82 TPHEM-----VLVLEMVPDGELQRLVDIQDGIPEQDTRSYMKQILEALAFLHDHNITHLD 136
+ V ++ + +L +V Q + + + + QIL L ++H +I H D
Sbjct: 94 PARSLEEFNDVYLVTHLMGADLNNIVKCQK-LTDDHVQFLIYQILRGLKYIHSADIIHRD 152
Query: 137 LKPQNILLTKDNNIKLCDFGISRVVNDVVEVKEIIGTPDYVAPEV-LSYEPISLATDMWS 195
LKP N+ + +D +K+ DFG++R +D E+ + T Y APE+ L++ + D+WS
Sbjct: 153 LKPSNLAVNEDCELKILDFGLARHTDD--EMTGYVATRWYRAPEIMLNWMHYNQTVDIWS 210
Query: 196 VGVLAYVLLSSHSPFAGDNKQETFLNISQCNFSFHEDLFGHISSQ-AKDFIQS 247
VG + LL+ + F G + + I + + +L ISS+ A+++IQS
Sbjct: 211 VGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQS 263
>pdb|3KQ7|A Chain A, Structure Of Human P38alpha With N-[4-Methyl-3-(6-{[2-(1-
Methylpyrrolidin-2-Yl)ethyl]amino}pyridine-3-
Amido)phenyl]- 2-(Morpholin-4-Yl)pyridine-4-Carboxamide
Length = 380
Score = 74.7 bits (182), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 61/233 (26%), Positives = 114/233 (48%), Gaps = 11/233 (4%)
Query: 22 GKFASVRKCTHKITKVEYAAKFIRKRRRSMDQMQDILHEAAVLYLAQKSERIVGLHEIYE 81
G + SV T + A K + + +S+ + E +L K E ++GL +++
Sbjct: 53 GAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLK-HMKHENVIGLLDVFT 111
Query: 82 TPHEM-----VLVLEMVPDGELQRLVDIQDGIPEQDTRSYMKQILEALAFLHDHNITHLD 136
+ V ++ + +L +V Q + + + + QIL L ++H +I H D
Sbjct: 112 PARSLEEFNDVYLVTHLMGADLNNIVKCQK-LTDDHVQFLIYQILRGLKYIHSADIIHRD 170
Query: 137 LKPQNILLTKDNNIKLCDFGISRVVNDVVEVKEIIGTPDYVAPEV-LSYEPISLATDMWS 195
LKP N+ + +D +K+ DFG++R +D E+ + T Y APE+ L++ + D+WS
Sbjct: 171 LKPSNLAVNEDCELKILDFGLARHTDD--EMTGYVATRWYRAPEIMLNWMHYNQTVDIWS 228
Query: 196 VGVLAYVLLSSHSPFAGDNKQETFLNISQCNFSFHEDLFGHISSQ-AKDFIQS 247
VG + LL+ + F G + + I + + +L ISS+ A+++IQS
Sbjct: 229 VGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQS 281
>pdb|1BL6|A Chain A, The Complex Structure Of The Map Kinase P38SB216995
pdb|1BL7|A Chain A, The Complex Structure Of The Map Kinase P38SB220025
pdb|2EWA|A Chain A, Dual Binding Mode Of Pyridinylimidazole To Map Kinase P38
pdb|1A9U|A Chain A, The Complex Structure Of The Map Kinase P38SB203580
pdb|3HA8|A Chain A, The Complex Structure Of The Map Kinase P38COMPOUND 14B
Length = 379
Score = 74.7 bits (182), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 61/233 (26%), Positives = 114/233 (48%), Gaps = 11/233 (4%)
Query: 22 GKFASVRKCTHKITKVEYAAKFIRKRRRSMDQMQDILHEAAVLYLAQKSERIVGLHEIYE 81
G + SV T + A K + + +S+ + E +L K E ++GL +++
Sbjct: 52 GAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLK-HMKHENVIGLLDVFT 110
Query: 82 TPHEM-----VLVLEMVPDGELQRLVDIQDGIPEQDTRSYMKQILEALAFLHDHNITHLD 136
+ V ++ + +L +V Q + + + + QIL L ++H +I H D
Sbjct: 111 PARSLEEFNDVYLVTHLMGADLNNIVKCQK-LTDDHVQFLIYQILRGLKYIHSADIIHRD 169
Query: 137 LKPQNILLTKDNNIKLCDFGISRVVNDVVEVKEIIGTPDYVAPEV-LSYEPISLATDMWS 195
LKP N+ + +D +K+ DFG++R +D E+ + T Y APE+ L++ + D+WS
Sbjct: 170 LKPSNLAVNEDCELKILDFGLARHTDD--EMTGYVATRWYRAPEIMLNWMHYNQTVDIWS 227
Query: 196 VGVLAYVLLSSHSPFAGDNKQETFLNISQCNFSFHEDLFGHISSQ-AKDFIQS 247
VG + LL+ + F G + + I + + +L ISS+ A+++IQS
Sbjct: 228 VGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQS 280
>pdb|1OZ1|A Chain A, P38 Mitogen-Activated Kinase In Complex With 4-Azaindole
Inhibitor
Length = 372
Score = 74.7 bits (182), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 61/233 (26%), Positives = 114/233 (48%), Gaps = 11/233 (4%)
Query: 22 GKFASVRKCTHKITKVEYAAKFIRKRRRSMDQMQDILHEAAVLYLAQKSERIVGLHEIYE 81
G + SV T + A K + + +S+ + E +L K E ++GL +++
Sbjct: 45 GAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLK-HMKHENVIGLLDVFT 103
Query: 82 TPHEM-----VLVLEMVPDGELQRLVDIQDGIPEQDTRSYMKQILEALAFLHDHNITHLD 136
+ V ++ + +L +V Q + + + + QIL L ++H +I H D
Sbjct: 104 PARSLEEFNDVYLVTHLMGADLNNIVKCQK-LTDDHVQFLIYQILRGLKYIHSADIIHRD 162
Query: 137 LKPQNILLTKDNNIKLCDFGISRVVNDVVEVKEIIGTPDYVAPEV-LSYEPISLATDMWS 195
LKP N+ + +D +K+ DFG++R +D E+ + T Y APE+ L++ + D+WS
Sbjct: 163 LKPSNLAVNEDCELKILDFGLARHTDD--EMTGYVATRWYRAPEIMLNWMHYNQTVDIWS 220
Query: 196 VGVLAYVLLSSHSPFAGDNKQETFLNISQCNFSFHEDLFGHISSQ-AKDFIQS 247
VG + LL+ + F G + + I + + +L ISS+ A+++IQS
Sbjct: 221 VGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQS 273
>pdb|3ZSG|A Chain A, X-Ray Structure Of P38alpha Bound To Tak-715
pdb|3ZSH|A Chain A, X-Ray Structure Of P38alpha Bound To Scio-469
pdb|3ZSI|A Chain A, X-Ray Structure Of P38alpha Bound To Vx-745
pdb|3ZS5|A Chain A, Structural Basis For Kinase Selectivity Of Three Clinical
P38alpha Inhibitors
Length = 362
Score = 74.7 bits (182), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 61/233 (26%), Positives = 114/233 (48%), Gaps = 11/233 (4%)
Query: 22 GKFASVRKCTHKITKVEYAAKFIRKRRRSMDQMQDILHEAAVLYLAQKSERIVGLHEIYE 81
G + SV T + A K + + +S+ + E +L K E ++GL +++
Sbjct: 35 GAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLK-HMKHENVIGLLDVFT 93
Query: 82 TPHEM-----VLVLEMVPDGELQRLVDIQDGIPEQDTRSYMKQILEALAFLHDHNITHLD 136
+ V ++ + +L +V Q + + + + QIL L ++H +I H D
Sbjct: 94 PARSLEEFNDVYLVTHLMGADLNNIVKCQK-LTDDHVQFLIYQILRGLKYIHSADIIHRD 152
Query: 137 LKPQNILLTKDNNIKLCDFGISRVVNDVVEVKEIIGTPDYVAPEV-LSYEPISLATDMWS 195
LKP N+ + +D +K+ DFG++R +D E+ + T Y APE+ L++ + D+WS
Sbjct: 153 LKPSNLAVNEDCELKILDFGLARHTDD--EMTGYVATRWYRAPEIMLNWMHYNQTVDIWS 210
Query: 196 VGVLAYVLLSSHSPFAGDNKQETFLNISQCNFSFHEDLFGHISSQ-AKDFIQS 247
VG + LL+ + F G + + I + + +L ISS+ A+++IQS
Sbjct: 211 VGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQS 263
>pdb|3MPT|A Chain A, Crystal Structure Of P38 Kinase In Complex With A
Pyrrole-2- Carboxamide Inhibitor
Length = 371
Score = 74.7 bits (182), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 61/233 (26%), Positives = 114/233 (48%), Gaps = 11/233 (4%)
Query: 22 GKFASVRKCTHKITKVEYAAKFIRKRRRSMDQMQDILHEAAVLYLAQKSERIVGLHEIYE 81
G + SV T + A K + + +S+ + E +L K E ++GL +++
Sbjct: 44 GAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLK-HMKHENVIGLLDVFT 102
Query: 82 TPHEM-----VLVLEMVPDGELQRLVDIQDGIPEQDTRSYMKQILEALAFLHDHNITHLD 136
+ V ++ + +L +V Q + + + + QIL L ++H +I H D
Sbjct: 103 PARSLEEFNDVYLVTHLMGADLNNIVKCQK-LTDDHVQFLIYQILRGLKYIHSADIIHRD 161
Query: 137 LKPQNILLTKDNNIKLCDFGISRVVNDVVEVKEIIGTPDYVAPEV-LSYEPISLATDMWS 195
LKP N+ + +D +K+ DFG++R +D E+ + T Y APE+ L++ + D+WS
Sbjct: 162 LKPSNLAVNEDCELKILDFGLARHTDD--EMTGYVATRWYRAPEIMLNWMHYNQTVDIWS 219
Query: 196 VGVLAYVLLSSHSPFAGDNKQETFLNISQCNFSFHEDLFGHISSQ-AKDFIQS 247
VG + LL+ + F G + + I + + +L ISS+ A+++IQS
Sbjct: 220 VGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQS 272
>pdb|2GFS|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3201195
pdb|3FKL|A Chain A, P38 Kinase Crystal Structure In Complex With Ro9552
pdb|3FKN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro7125
pdb|3FL4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro5634
pdb|3FLQ|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((S)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin
pdb|3FLS|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((R)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin-7-One
pdb|3FLW|A Chain A, P38 Kinase Crystal Structure In Complex With Pamapimod
pdb|3FLY|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-Isopropylamino-8-Methyl-8h-Pyrido[2,
3- D]pyrimidin-7-One
pdb|3FLZ|A Chain A, P38 Kinase Crystal Structure In Complex With
8-Methyl-6-Phenoxy-2-
(Tetrahydro-Pyran-4-Ylamino)-8h-Pyrido[2,
3-D]pyrimidin-7-One
pdb|3FMH|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((R)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FMJ|A Chain A, P38 Kinase Crystal Structure In Complex With
4-(5-Methyl-3-Phenyl- Isoxazol-4-Yl)-Pyrimidin-2-Ylamine
pdb|3FMK|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((S)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FML|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6224
pdb|3FMM|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6226
pdb|3FMN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro2530
pdb|3FSF|A Chain A, P38 Kinase Crystal Structure In Complex With 3-(2,6-
Dichloro-Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-
Phenylamino]-
1-Methyl-3,4-Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3FSK|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6257
Length = 372
Score = 74.7 bits (182), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 61/233 (26%), Positives = 114/233 (48%), Gaps = 11/233 (4%)
Query: 22 GKFASVRKCTHKITKVEYAAKFIRKRRRSMDQMQDILHEAAVLYLAQKSERIVGLHEIYE 81
G + SV T + A K + + +S+ + E +L K E ++GL +++
Sbjct: 45 GAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLK-HMKHENVIGLLDVFT 103
Query: 82 TPHEM-----VLVLEMVPDGELQRLVDIQDGIPEQDTRSYMKQILEALAFLHDHNITHLD 136
+ V ++ + +L +V Q + + + + QIL L ++H +I H D
Sbjct: 104 PARSLEEFNDVYLVTHLMGADLNNIVKCQK-LTDDHVQFLIYQILRGLKYIHSADIIHRD 162
Query: 137 LKPQNILLTKDNNIKLCDFGISRVVNDVVEVKEIIGTPDYVAPEV-LSYEPISLATDMWS 195
LKP N+ + +D +K+ DFG++R +D E+ + T Y APE+ L++ + D+WS
Sbjct: 163 LKPSNLAVNEDCELKILDFGLARHTDD--EMTGYVATRWYRAPEIMLNWMHYNQTVDIWS 220
Query: 196 VGVLAYVLLSSHSPFAGDNKQETFLNISQCNFSFHEDLFGHISSQ-AKDFIQS 247
VG + LL+ + F G + + I + + +L ISS+ A+++IQS
Sbjct: 221 VGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQS 273
>pdb|4EWQ|A Chain A, Human P38 Alpha Mapk In Complex With A Pyridazine Based
Inhibitor
Length = 383
Score = 74.7 bits (182), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 61/233 (26%), Positives = 114/233 (48%), Gaps = 11/233 (4%)
Query: 22 GKFASVRKCTHKITKVEYAAKFIRKRRRSMDQMQDILHEAAVLYLAQKSERIVGLHEIYE 81
G + SV T + A K + + +S+ + E +L K E ++GL +++
Sbjct: 56 GAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLK-HMKHENVIGLLDVFT 114
Query: 82 TPHEM-----VLVLEMVPDGELQRLVDIQDGIPEQDTRSYMKQILEALAFLHDHNITHLD 136
+ V ++ + +L +V Q + + + + QIL L ++H +I H D
Sbjct: 115 PARSLEEFNDVYLVTHLMGADLNNIVKCQK-LTDDHVQFLIYQILRGLKYIHSADIIHRD 173
Query: 137 LKPQNILLTKDNNIKLCDFGISRVVNDVVEVKEIIGTPDYVAPEV-LSYEPISLATDMWS 195
LKP N+ + +D +K+ DFG++R +D E+ + T Y APE+ L++ + D+WS
Sbjct: 174 LKPSNLAVNEDCELKILDFGLARHTDD--EMXGYVATRWYRAPEIMLNWMHYNQTVDIWS 231
Query: 196 VGVLAYVLLSSHSPFAGDNKQETFLNISQCNFSFHEDLFGHISSQ-AKDFIQS 247
VG + LL+ + F G + + I + + +L ISS+ A+++IQS
Sbjct: 232 VGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQS 284
>pdb|2GHL|A Chain A, Mutant Mus Musculus P38 Kinase Domain In Complex With
Inhibitor Pg-874743
pdb|2GHM|A Chain A, Mutated Map Kinase P38 (Mus Musculus) In Complex With
Inhbitor Pg-895449
Length = 348
Score = 74.7 bits (182), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 61/248 (24%), Positives = 118/248 (47%), Gaps = 26/248 (10%)
Query: 8 NGGYQTLIFCMPSR-GKFASVRKCTHKITKVEYAAKFIRKRRRSMDQMQDILHEAAVLYL 66
+G Y ++ ++ G +V+K + + +A + R+ R L
Sbjct: 28 SGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELR---------------LLK 72
Query: 67 AQKSERIVGLHEIYETPHEM-----VLVLEMVPDGELQRLVDIQDGIPEQDTRSYMKQIL 121
K E ++GL +++ + V ++ + +L +V Q + + + + QIL
Sbjct: 73 HMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK-LTDDHVQFLIYQIL 131
Query: 122 EALAFLHDHNITHLDLKPQNILLTKDNNIKLCDFGISRVVNDVVEVKEIIGTPDYVAPEV 181
L ++H +I H DLKP N+ + +D +K+ DFG++R +D E+ + T Y APE+
Sbjct: 132 RGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDD--EMAGFVATRWYRAPEI 189
Query: 182 -LSYEPISLATDMWSVGVLAYVLLSSHSPFAGDNKQETFLNISQCNFSFHEDLFGHISSQ 240
L++ + D+WSVG + LL+ + F G + + I + + +L ISS+
Sbjct: 190 MLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSE 249
Query: 241 -AKDFIQS 247
A+++IQS
Sbjct: 250 SARNYIQS 257
>pdb|3OEF|X Chain X, Crystal Structure Of Y323f Inactive Mutant Of P38alpha Map
Kinase
Length = 360
Score = 74.7 bits (182), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 61/233 (26%), Positives = 114/233 (48%), Gaps = 11/233 (4%)
Query: 22 GKFASVRKCTHKITKVEYAAKFIRKRRRSMDQMQDILHEAAVLYLAQKSERIVGLHEIYE 81
G + SV T + A K + + +S+ + E +L K E ++GL +++
Sbjct: 33 GAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLK-HMKHENVIGLLDVFT 91
Query: 82 TPHEM-----VLVLEMVPDGELQRLVDIQDGIPEQDTRSYMKQILEALAFLHDHNITHLD 136
+ V ++ + +L +V Q + + + + QIL L ++H +I H D
Sbjct: 92 PARSLEEFNDVYLVTHLMGADLNNIVKCQK-LTDDHVQFLIYQILRGLKYIHSADIIHRD 150
Query: 137 LKPQNILLTKDNNIKLCDFGISRVVNDVVEVKEIIGTPDYVAPEV-LSYEPISLATDMWS 195
LKP N+ + +D +K+ DFG++R +D E+ + T Y APE+ L++ + D+WS
Sbjct: 151 LKPSNLAVNEDCELKILDFGLARHTDD--EMTGYVATRWYRAPEIMLNWMHYNQTVDIWS 208
Query: 196 VGVLAYVLLSSHSPFAGDNKQETFLNISQCNFSFHEDLFGHISSQ-AKDFIQS 247
VG + LL+ + F G + + I + + +L ISS+ A+++IQS
Sbjct: 209 VGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQS 261
>pdb|2NPQ|A Chain A, A Novel Lipid Binding Site In The P38 Alpha Map Kinase
Length = 367
Score = 74.7 bits (182), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 61/233 (26%), Positives = 114/233 (48%), Gaps = 11/233 (4%)
Query: 22 GKFASVRKCTHKITKVEYAAKFIRKRRRSMDQMQDILHEAAVLYLAQKSERIVGLHEIYE 81
G + SV T + A K + + +S+ + E +L K E ++GL +++
Sbjct: 40 GAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLK-HMKHENVIGLLDVFT 98
Query: 82 TPHEM-----VLVLEMVPDGELQRLVDIQDGIPEQDTRSYMKQILEALAFLHDHNITHLD 136
+ V ++ + +L +V Q + + + + QIL L ++H +I H D
Sbjct: 99 PARSLEEFNDVYLVTHLMGADLNNIVKCQK-LTDDHVQFLIYQILRGLKYIHSADIIHRD 157
Query: 137 LKPQNILLTKDNNIKLCDFGISRVVNDVVEVKEIIGTPDYVAPEV-LSYEPISLATDMWS 195
LKP N+ + +D +K+ DFG++R +D E+ + T Y APE+ L++ + D+WS
Sbjct: 158 LKPSNLAVNEDCELKILDFGLARHTDD--EMTGYVATRWYRAPEIMLNWMHYNQTVDIWS 215
Query: 196 VGVLAYVLLSSHSPFAGDNKQETFLNISQCNFSFHEDLFGHISSQ-AKDFIQS 247
VG + LL+ + F G + + I + + +L ISS+ A+++IQS
Sbjct: 216 VGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQS 268
>pdb|1M7Q|A Chain A, Crystal Structure Of P38 Map Kinase In Complex With A
Dihydroquinazolinone Inhibitor
pdb|1OUK|A Chain A, The Structure Of P38 Alpha In Complex With A
Pyridinylimidazole Inhibitor
pdb|1OUY|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydropyrido- Pyrimidine Inhibitor
pdb|1R39|A Chain A, The Structure Of P38alpha
pdb|1YQJ|A Chain A, Crystal Structure Of P38 Alpha In Complex With A Selective
Pyridazine Inhibitor
pdb|2OKR|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2OKR|D Chain D, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|B Chain B, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|1WFC|A Chain A, Structure Of Apo, Unphosphorylated, P38 Mitogen Activated
Protein Kinase P38 (P38 Map Kinase) The Mammalian
Homologue Of The Yeast Hog1 Protein
pdb|3DS6|A Chain A, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|B Chain B, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|C Chain C, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|D Chain D, P38 Complex With A Phthalazine Inhibitor
pdb|3FC1|X Chain X, Crystal Structure Of P38 Kinase Bound To
Pyrimido-Pyridazinone Inhibitor
pdb|3GFE|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor
pdb|3ITZ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridazine Inhibitor
pdb|3LHJ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor.
pdb|3ZYA|A Chain A, Human P38 Map Kinase In Complex With 2-Amino-Phenylamino-
Dibenzosuberone
pdb|3U8W|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Triazolopyridazinone Inhibitor
Length = 366
Score = 74.7 bits (182), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 61/233 (26%), Positives = 114/233 (48%), Gaps = 11/233 (4%)
Query: 22 GKFASVRKCTHKITKVEYAAKFIRKRRRSMDQMQDILHEAAVLYLAQKSERIVGLHEIYE 81
G + SV T + A K + + +S+ + E +L K E ++GL +++
Sbjct: 39 GAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLK-HMKHENVIGLLDVFT 97
Query: 82 TPHEM-----VLVLEMVPDGELQRLVDIQDGIPEQDTRSYMKQILEALAFLHDHNITHLD 136
+ V ++ + +L +V Q + + + + QIL L ++H +I H D
Sbjct: 98 PARSLEEFNDVYLVTHLMGADLNNIVKCQK-LTDDHVQFLIYQILRGLKYIHSADIIHRD 156
Query: 137 LKPQNILLTKDNNIKLCDFGISRVVNDVVEVKEIIGTPDYVAPEV-LSYEPISLATDMWS 195
LKP N+ + +D +K+ DFG++R +D E+ + T Y APE+ L++ + D+WS
Sbjct: 157 LKPSNLAVNEDCELKILDFGLARHTDD--EMTGYVATRWYRAPEIMLNWMHYNQTVDIWS 214
Query: 196 VGVLAYVLLSSHSPFAGDNKQETFLNISQCNFSFHEDLFGHISSQ-AKDFIQS 247
VG + LL+ + F G + + I + + +L ISS+ A+++IQS
Sbjct: 215 VGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQS 267
>pdb|2BAJ|A Chain A, P38alpha Bound To Pyrazolourea
pdb|2BAK|A Chain A, P38alpha Map Kinase Bound To Mpaq
pdb|4A9Y|A Chain A, P38alpha Map Kinase Bound To Cmpd 8
pdb|4AA0|A Chain A, P38alpha Map Kinase Bound To Cmpd 2
pdb|4AA4|A Chain A, P38alpha Map Kinase Bound To Cmpd 22
pdb|4AAC|A Chain A, P38alpha Map Kinase Bound To Cmpd 29
Length = 365
Score = 74.7 bits (182), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 61/233 (26%), Positives = 114/233 (48%), Gaps = 11/233 (4%)
Query: 22 GKFASVRKCTHKITKVEYAAKFIRKRRRSMDQMQDILHEAAVLYLAQKSERIVGLHEIYE 81
G + SV T + A K + + +S+ + E +L K E ++GL +++
Sbjct: 38 GAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLK-HMKHENVIGLLDVFT 96
Query: 82 TPHEM-----VLVLEMVPDGELQRLVDIQDGIPEQDTRSYMKQILEALAFLHDHNITHLD 136
+ V ++ + +L +V Q + + + + QIL L ++H +I H D
Sbjct: 97 PARSLEEFNDVYLVTHLMGADLNNIVKCQK-LTDDHVQFLIYQILRGLKYIHSADIIHRD 155
Query: 137 LKPQNILLTKDNNIKLCDFGISRVVNDVVEVKEIIGTPDYVAPEV-LSYEPISLATDMWS 195
LKP N+ + +D +K+ DFG++R +D E+ + T Y APE+ L++ + D+WS
Sbjct: 156 LKPSNLAVNEDCELKILDFGLARHTDD--EMTGYVATRWYRAPEIMLNWMHYNQTVDIWS 213
Query: 196 VGVLAYVLLSSHSPFAGDNKQETFLNISQCNFSFHEDLFGHISSQ-AKDFIQS 247
VG + LL+ + F G + + I + + +L ISS+ A+++IQS
Sbjct: 214 VGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQS 266
>pdb|3HRB|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|3MW1|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|2YIS|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase.
pdb|2YIW|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase
Length = 359
Score = 74.7 bits (182), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 61/233 (26%), Positives = 114/233 (48%), Gaps = 11/233 (4%)
Query: 22 GKFASVRKCTHKITKVEYAAKFIRKRRRSMDQMQDILHEAAVLYLAQKSERIVGLHEIYE 81
G + SV T + A K + + +S+ + E +L K E ++GL +++
Sbjct: 32 GAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLK-HMKHENVIGLLDVFT 90
Query: 82 TPHEM-----VLVLEMVPDGELQRLVDIQDGIPEQDTRSYMKQILEALAFLHDHNITHLD 136
+ V ++ + +L +V Q + + + + QIL L ++H +I H D
Sbjct: 91 PARSLEEFNDVYLVTHLMGADLNNIVKCQK-LTDDHVQFLIYQILRGLKYIHSADIIHRD 149
Query: 137 LKPQNILLTKDNNIKLCDFGISRVVNDVVEVKEIIGTPDYVAPEV-LSYEPISLATDMWS 195
LKP N+ + +D +K+ DFG++R +D E+ + T Y APE+ L++ + D+WS
Sbjct: 150 LKPSNLAVNEDCELKILDFGLARHTDD--EMTGYVATRWYRAPEIMLNWMHYNQTVDIWS 207
Query: 196 VGVLAYVLLSSHSPFAGDNKQETFLNISQCNFSFHEDLFGHISSQ-AKDFIQS 247
VG + LL+ + F G + + I + + +L ISS+ A+++IQS
Sbjct: 208 VGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQS 260
>pdb|1YWR|A Chain A, Crystal Structure Analysis Of Inactive P38 Kinase Domain
In Complex With A Monocyclic Pyrazolone Inhibitor
Length = 360
Score = 74.7 bits (182), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 61/248 (24%), Positives = 118/248 (47%), Gaps = 26/248 (10%)
Query: 8 NGGYQTLIFCMPSR-GKFASVRKCTHKITKVEYAAKFIRKRRRSMDQMQDILHEAAVLYL 66
+G Y ++ ++ G +V+K + + +A + R+ R L
Sbjct: 32 SGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELR---------------LLK 76
Query: 67 AQKSERIVGLHEIYETPHEM-----VLVLEMVPDGELQRLVDIQDGIPEQDTRSYMKQIL 121
K E ++GL +++ + V ++ + +L +V Q + + + + QIL
Sbjct: 77 HMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK-LTDDHVQFLIYQIL 135
Query: 122 EALAFLHDHNITHLDLKPQNILLTKDNNIKLCDFGISRVVNDVVEVKEIIGTPDYVAPEV 181
L ++H +I H DLKP N+ + +D +K+ DFG++R +D E+ + T Y APE+
Sbjct: 136 RGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDD--EMAGFVATRWYRAPEI 193
Query: 182 -LSYEPISLATDMWSVGVLAYVLLSSHSPFAGDNKQETFLNISQCNFSFHEDLFGHISSQ 240
L++ + D+WSVG + LL+ + F G + + I + + +L ISS+
Sbjct: 194 MLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSE 253
Query: 241 -AKDFIQS 247
A+++IQS
Sbjct: 254 SARNYIQS 261
>pdb|3OD6|X Chain X, Crystal Structure Of P38alpha Y323t Active Mutant
Length = 360
Score = 74.7 bits (182), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 61/233 (26%), Positives = 114/233 (48%), Gaps = 11/233 (4%)
Query: 22 GKFASVRKCTHKITKVEYAAKFIRKRRRSMDQMQDILHEAAVLYLAQKSERIVGLHEIYE 81
G + SV T + A K + + +S+ + E +L K E ++GL +++
Sbjct: 33 GAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLK-HMKHENVIGLLDVFT 91
Query: 82 TPHEM-----VLVLEMVPDGELQRLVDIQDGIPEQDTRSYMKQILEALAFLHDHNITHLD 136
+ V ++ + +L +V Q + + + + QIL L ++H +I H D
Sbjct: 92 PARSLEEFNDVYLVTHLMGADLNNIVKCQK-LTDDHVQFLIYQILRGLKYIHSADIIHRD 150
Query: 137 LKPQNILLTKDNNIKLCDFGISRVVNDVVEVKEIIGTPDYVAPEV-LSYEPISLATDMWS 195
LKP N+ + +D +K+ DFG++R +D E+ + T Y APE+ L++ + D+WS
Sbjct: 151 LKPSNLAVNEDCELKILDFGLARHTDD--EMTGYVATRWYRAPEIMLNWMHYNQTVDIWS 208
Query: 196 VGVLAYVLLSSHSPFAGDNKQETFLNISQCNFSFHEDLFGHISSQ-AKDFIQS 247
VG + LL+ + F G + + I + + +L ISS+ A+++IQS
Sbjct: 209 VGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQS 261
>pdb|3ODZ|X Chain X, Crystal Structure Of P38alpha Y323r Active Mutant
Length = 360
Score = 74.7 bits (182), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 61/233 (26%), Positives = 114/233 (48%), Gaps = 11/233 (4%)
Query: 22 GKFASVRKCTHKITKVEYAAKFIRKRRRSMDQMQDILHEAAVLYLAQKSERIVGLHEIYE 81
G + SV T + A K + + +S+ + E +L K E ++GL +++
Sbjct: 33 GAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLK-HMKHENVIGLLDVFT 91
Query: 82 TPHEM-----VLVLEMVPDGELQRLVDIQDGIPEQDTRSYMKQILEALAFLHDHNITHLD 136
+ V ++ + +L +V Q + + + + QIL L ++H +I H D
Sbjct: 92 PARSLEEFNDVYLVTHLMGADLNNIVKCQK-LTDDHVQFLIYQILRGLKYIHSADIIHRD 150
Query: 137 LKPQNILLTKDNNIKLCDFGISRVVNDVVEVKEIIGTPDYVAPEV-LSYEPISLATDMWS 195
LKP N+ + +D +K+ DFG++R +D E+ + T Y APE+ L++ + D+WS
Sbjct: 151 LKPSNLAVNEDCELKILDFGLARHTDD--EMTGYVATRWYRAPEIMLNWMHYNQTVDIWS 208
Query: 196 VGVLAYVLLSSHSPFAGDNKQETFLNISQCNFSFHEDLFGHISSQ-AKDFIQS 247
VG + LL+ + F G + + I + + +L ISS+ A+++IQS
Sbjct: 209 VGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQS 261
>pdb|1DI9|A Chain A, The Structure Of P38 Mitogen-Activated Protein Kinase In
Complex With 4-[3-Methylsulfanylanilino]-6,7-
Dimethoxyquinazoline
pdb|1KV1|A Chain A, P38 Map Kinase In Complex With Inhibitor 1
pdb|1KV2|A Chain A, Human P38 Map Kinase In Complex With Birb 796
pdb|1WBO|A Chain A, Fragment Based P38 Inhibitors
pdb|1W7H|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W82|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W83|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W84|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1ZZ2|A Chain A, Two Classes Of P38alpha Map Kinase Inhibitors Having A
Common Diphenylether Core But Exhibiting Divergent
Binding Modes
pdb|1WBN|A Chain A, Fragment Based P38 Inhibitors
pdb|1WBS|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBT|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-based Lead Generation.
pdb|1WBV|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBW|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1ZYJ|A Chain A, Human P38 Map Kinase In Complex With Inhibitor 1a
pdb|2ZAZ|A Chain A, Crystal Structure Of P38 In Complex With 4-Anilino
Quinoline Inhibitor
pdb|2ZB0|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|2ZB1|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|3HL7|A Chain A, Crystal Structure Of Human P38alpha Complexed With Sd-0006
pdb|3HLL|A Chain A, Crystal Structure Of Human P38alpha Complexed With
Ph-797804
pdb|3HP2|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyridinone Compound
pdb|3HP5|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyrimidopyridazinone Compound
pdb|3KF7|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Triazolopyrimidine Compound
pdb|3MGY|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3ROC|A Chain A, Crystal Structure Of Human P38 Alpha Complexed With A
Pyrimidinone Compound
pdb|3RIN|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|4E5B|A Chain A, Structure Of P38a Map Kinase Without Bog
pdb|4E6A|A Chain A, P38a-Pia23 Complex
pdb|4E6C|A Chain A, P38a-perifosine Complex
pdb|4E8A|A Chain A, The Crystal Structure Of P38a Map Kinase In Complex With
Pia24
Length = 360
Score = 74.7 bits (182), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 61/233 (26%), Positives = 114/233 (48%), Gaps = 11/233 (4%)
Query: 22 GKFASVRKCTHKITKVEYAAKFIRKRRRSMDQMQDILHEAAVLYLAQKSERIVGLHEIYE 81
G + SV T + A K + + +S+ + E +L K E ++GL +++
Sbjct: 33 GAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLK-HMKHENVIGLLDVFT 91
Query: 82 TPHEM-----VLVLEMVPDGELQRLVDIQDGIPEQDTRSYMKQILEALAFLHDHNITHLD 136
+ V ++ + +L +V Q + + + + QIL L ++H +I H D
Sbjct: 92 PARSLEEFNDVYLVTHLMGADLNNIVKCQK-LTDDHVQFLIYQILRGLKYIHSADIIHRD 150
Query: 137 LKPQNILLTKDNNIKLCDFGISRVVNDVVEVKEIIGTPDYVAPEV-LSYEPISLATDMWS 195
LKP N+ + +D +K+ DFG++R +D E+ + T Y APE+ L++ + D+WS
Sbjct: 151 LKPSNLAVNEDCELKILDFGLARHTDD--EMTGYVATRWYRAPEIMLNWMHYNQTVDIWS 208
Query: 196 VGVLAYVLLSSHSPFAGDNKQETFLNISQCNFSFHEDLFGHISSQ-AKDFIQS 247
VG + LL+ + F G + + I + + +L ISS+ A+++IQS
Sbjct: 209 VGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQS 261
>pdb|1YW2|A Chain A, Mutated Mus Musculus P38 Kinase (Mp38)
Length = 360
Score = 74.7 bits (182), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 61/248 (24%), Positives = 118/248 (47%), Gaps = 26/248 (10%)
Query: 8 NGGYQTLIFCMPSR-GKFASVRKCTHKITKVEYAAKFIRKRRRSMDQMQDILHEAAVLYL 66
+G Y ++ ++ G +V+K + + +A + R+ R L
Sbjct: 32 SGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELR---------------LLK 76
Query: 67 AQKSERIVGLHEIYETPHEM-----VLVLEMVPDGELQRLVDIQDGIPEQDTRSYMKQIL 121
K E ++GL +++ + V ++ + +L +V Q + + + + QIL
Sbjct: 77 HMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK-LTDDHVQFLIYQIL 135
Query: 122 EALAFLHDHNITHLDLKPQNILLTKDNNIKLCDFGISRVVNDVVEVKEIIGTPDYVAPEV 181
L ++H +I H DLKP N+ + +D +K+ DFG++R +D E+ + T Y APE+
Sbjct: 136 RGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDD--EMAGFVATRWYRAPEI 193
Query: 182 -LSYEPISLATDMWSVGVLAYVLLSSHSPFAGDNKQETFLNISQCNFSFHEDLFGHISSQ 240
L++ + D+WSVG + LL+ + F G + + I + + +L ISS+
Sbjct: 194 MLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSE 253
Query: 241 -AKDFIQS 247
A+++IQS
Sbjct: 254 SARNYIQS 261
>pdb|3D7Z|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
Length = 360
Score = 74.7 bits (182), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 61/233 (26%), Positives = 114/233 (48%), Gaps = 11/233 (4%)
Query: 22 GKFASVRKCTHKITKVEYAAKFIRKRRRSMDQMQDILHEAAVLYLAQKSERIVGLHEIYE 81
G + SV T + A K + + +S+ + E +L K E ++GL +++
Sbjct: 33 GAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLK-HMKHENVIGLLDVFT 91
Query: 82 TPHEM-----VLVLEMVPDGELQRLVDIQDGIPEQDTRSYMKQILEALAFLHDHNITHLD 136
+ V ++ + +L +V Q + + + + QIL L ++H +I H D
Sbjct: 92 PARSLEEFNDVYLVTHLMGADLNNIVKXQK-LTDDHVQFLIYQILRGLKYIHSADIIHRD 150
Query: 137 LKPQNILLTKDNNIKLCDFGISRVVNDVVEVKEIIGTPDYVAPEV-LSYEPISLATDMWS 195
LKP N+ + +D +K+ DFG++R +D E+ + T Y APE+ L++ + D+WS
Sbjct: 151 LKPSNLAVNEDCELKILDFGLARHTDD--EMTGYVATRWYRAPEIMLNWMHYNQTVDIWS 208
Query: 196 VGVLAYVLLSSHSPFAGDNKQETFLNISQCNFSFHEDLFGHISSQ-AKDFIQS 247
VG + LL+ + F G + + I + + +L ISS+ A+++IQS
Sbjct: 209 VGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQS 261
>pdb|3ODY|X Chain X, Crystal Structure Of P38alpha Y323q Active Mutant
Length = 360
Score = 74.7 bits (182), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 61/233 (26%), Positives = 114/233 (48%), Gaps = 11/233 (4%)
Query: 22 GKFASVRKCTHKITKVEYAAKFIRKRRRSMDQMQDILHEAAVLYLAQKSERIVGLHEIYE 81
G + SV T + A K + + +S+ + E +L K E ++GL +++
Sbjct: 33 GAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLK-HMKHENVIGLLDVFT 91
Query: 82 TPHEM-----VLVLEMVPDGELQRLVDIQDGIPEQDTRSYMKQILEALAFLHDHNITHLD 136
+ V ++ + +L +V Q + + + + QIL L ++H +I H D
Sbjct: 92 PARSLEEFNDVYLVTHLMGADLNNIVKCQK-LTDDHVQFLIYQILRGLKYIHSADIIHRD 150
Query: 137 LKPQNILLTKDNNIKLCDFGISRVVNDVVEVKEIIGTPDYVAPEV-LSYEPISLATDMWS 195
LKP N+ + +D +K+ DFG++R +D E+ + T Y APE+ L++ + D+WS
Sbjct: 151 LKPSNLAVNEDCELKILDFGLARHTDD--EMTGYVATRWYRAPEIMLNWMHYNQTVDIWS 208
Query: 196 VGVLAYVLLSSHSPFAGDNKQETFLNISQCNFSFHEDLFGHISSQ-AKDFIQS 247
VG + LL+ + F G + + I + + +L ISS+ A+++IQS
Sbjct: 209 VGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQS 261
>pdb|1IAN|A Chain A, Human P38 Map Kinase Inhibitor Complex
pdb|2QD9|A Chain A, P38 Alpha Map Kinase Inhibitor Based On Heterobicyclic
Scaffolds
pdb|2RG5|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase
Inhibitor Compound 11b
pdb|2RG6|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase
Inhibitor Compound 11j
pdb|3C5U|A Chain A, P38 Alpha Map Kinase Complexed With A Benzothiazole Based
Inhibitor
pdb|3BV2|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 30
pdb|3BV3|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 2
pdb|3BX5|A Chain A, P38 Alpha Map Kinase Complexed With Bms-640994
pdb|3L8X|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Pyrimidine
Based Inhibitor
pdb|3NWW|A Chain A, P38 Alpha Kinase Complexed With A
2-Aminothiazol-5-Yl-Pyrimidine Based Inhibitor
pdb|3MVL|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVL|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVM|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3MVM|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3OCG|A Chain A, P38 Alpha Kinase Complexed With A 5-Amino-Pyrazole Based
Inhibitor
pdb|3S4Q|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Triazine Based
Inhibitor
Length = 366
Score = 74.7 bits (182), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 61/233 (26%), Positives = 114/233 (48%), Gaps = 11/233 (4%)
Query: 22 GKFASVRKCTHKITKVEYAAKFIRKRRRSMDQMQDILHEAAVLYLAQKSERIVGLHEIYE 81
G + SV T + A K + + +S+ + E +L K E ++GL +++
Sbjct: 39 GAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLK-HMKHENVIGLLDVFT 97
Query: 82 TPHEM-----VLVLEMVPDGELQRLVDIQDGIPEQDTRSYMKQILEALAFLHDHNITHLD 136
+ V ++ + +L +V Q + + + + QIL L ++H +I H D
Sbjct: 98 PARSLEEFNDVYLVTHLMGADLNNIVKCQK-LTDDHVQFLIYQILRGLKYIHSADIIHRD 156
Query: 137 LKPQNILLTKDNNIKLCDFGISRVVNDVVEVKEIIGTPDYVAPEV-LSYEPISLATDMWS 195
LKP N+ + +D +K+ DFG++R +D E+ + T Y APE+ L++ + D+WS
Sbjct: 157 LKPSNLAVNEDCELKILDFGLARHTDD--EMTGYVATRWYRAPEIMLNWMHYNQTVDIWS 214
Query: 196 VGVLAYVLLSSHSPFAGDNKQETFLNISQCNFSFHEDLFGHISSQ-AKDFIQS 247
VG + LL+ + F G + + I + + +L ISS+ A+++IQS
Sbjct: 215 VGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQS 267
>pdb|3GCP|A Chain A, Human P38 Map Kinase In Complex With Sb203580
pdb|3GCQ|A Chain A, Human P38 Map Kinase In Complex With Rl45
pdb|3GCS|A Chain A, Human P38 Map Kinase In Complex With Sorafenib
pdb|3GCV|A Chain A, Human P38 Map Kinase In Complex With Rl62
pdb|3HV3|A Chain A, Human P38 Map Kinase In Complex With Rl49
pdb|3IW5|A Chain A, Human P38 Map Kinase In Complex With An Indole Derivative
pdb|3IW6|A Chain A, Human P38 Map Kinase In Complex With A Benzylpiperazin-
Pyrrol
pdb|3IW7|A Chain A, Human P38 Map Kinase In Complex With An Imidazo-Pyridine
pdb|3IW8|A Chain A, Structure Of Inactive Human P38 Map Kinase In Complex With
A Thiazole-Urea
pdb|3HUB|A Chain A, Human P38 Map Kinase In Complex With Scios-469
pdb|3L8S|A Chain A, Human P38 Map Kinase In Complex With Cp-547632
pdb|3LFB|A Chain A, Human P38 Map Kinase In Complex With Rl98
pdb|3LFC|A Chain A, Human P38 Map Kinase In Complex With Rl99
pdb|3LFD|A Chain A, Human P38 Map Kinase In Complex With Rl113
pdb|3LFE|A Chain A, Human P38 Map Kinase In Complex With Rl116
pdb|3LFF|A Chain A, Human P38 Map Kinase In Complex With Rl166
pdb|3PG3|A Chain A, Human P38 Map Kinase In Complex With Rl182
Length = 360
Score = 74.7 bits (182), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 61/233 (26%), Positives = 114/233 (48%), Gaps = 11/233 (4%)
Query: 22 GKFASVRKCTHKITKVEYAAKFIRKRRRSMDQMQDILHEAAVLYLAQKSERIVGLHEIYE 81
G + SV T + A K + + +S+ + E +L K E ++GL +++
Sbjct: 33 GAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLK-HMKHENVIGLLDVFT 91
Query: 82 TPHEM-----VLVLEMVPDGELQRLVDIQDGIPEQDTRSYMKQILEALAFLHDHNITHLD 136
+ V ++ + +L +V Q + + + + QIL L ++H +I H D
Sbjct: 92 PARSLEEFNDVYLVTHLMGADLNNIVKSQK-LTDDHVQFLIYQILRGLKYIHSADIIHRD 150
Query: 137 LKPQNILLTKDNNIKLCDFGISRVVNDVVEVKEIIGTPDYVAPEV-LSYEPISLATDMWS 195
LKP N+ + +D+ +K+ DFG+ R +D E+ + T Y APE+ L++ + D+WS
Sbjct: 151 LKPSNLAVNEDSELKILDFGLCRHTDD--EMTGYVATRWYRAPEIMLNWMHYNQTVDIWS 208
Query: 196 VGVLAYVLLSSHSPFAGDNKQETFLNISQCNFSFHEDLFGHISSQ-AKDFIQS 247
VG + LL+ + F G + + I + + +L ISS+ A+++IQS
Sbjct: 209 VGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQS 261
>pdb|2ZOQ|A Chain A, Structural Dissection Of Human Mitogen-Activated Kinase
Erk1
pdb|2ZOQ|B Chain B, Structural Dissection Of Human Mitogen-Activated Kinase
Erk1
Length = 382
Score = 74.3 bits (181), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 43/138 (31%), Positives = 78/138 (56%), Gaps = 6/138 (4%)
Query: 116 YMKQILEALAFLHDHNITHLDLKPQNILLTKDNNIKLCDFGISRVVNDVVE----VKEII 171
++ QIL L ++H N+ H DLKP N+L+ ++K+CDFG++R+ + + + E +
Sbjct: 149 FLYQILRGLKYIHSANVLHRDLKPSNLLINTTCDLKICDFGLARIADPEHDHTGFLTEXV 208
Query: 172 GTPDYVAPEV-LSYEPISLATDMWSVGVLAYVLLSSHSPFAGDNKQETFLNI-SQCNFSF 229
T Y APE+ L+ + + + D+WSVG + +LS+ F G + + +I
Sbjct: 209 ATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPS 268
Query: 230 HEDLFGHISSQAKDFIQS 247
EDL I+ +A++++QS
Sbjct: 269 QEDLNCIINMKARNYLQS 286
>pdb|2GTM|A Chain A, Mutated Mouse P38 Map Kinase Domain In Complex With
Inhibitor Pg-892579
pdb|2GTN|A Chain A, Mutated Map Kinase P38 (mus Musculus) In Complex With
Inhbitor Pg-951717
Length = 348
Score = 74.3 bits (181), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 61/248 (24%), Positives = 118/248 (47%), Gaps = 26/248 (10%)
Query: 8 NGGYQTLIFCMPSR-GKFASVRKCTHKITKVEYAAKFIRKRRRSMDQMQDILHEAAVLYL 66
+G Y ++ ++ G +V+K + + +A + R+ R L
Sbjct: 28 SGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELR---------------LLK 72
Query: 67 AQKSERIVGLHEIYETPHEM-----VLVLEMVPDGELQRLVDIQDGIPEQDTRSYMKQIL 121
K E ++GL +++ + V ++ + +L +V Q + + + + QIL
Sbjct: 73 HMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK-LTDDHVQFLIYQIL 131
Query: 122 EALAFLHDHNITHLDLKPQNILLTKDNNIKLCDFGISRVVNDVVEVKEIIGTPDYVAPEV 181
L ++H +I H DLKP N+ + +D +K+ DFG++R +D E+ + T Y APE+
Sbjct: 132 RGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDD--EMTGYVATRWYRAPEI 189
Query: 182 -LSYEPISLATDMWSVGVLAYVLLSSHSPFAGDNKQETFLNISQCNFSFHEDLFGHISSQ 240
L++ + D+WSVG + LL+ + F G + + I + + +L ISS+
Sbjct: 190 MLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSE 249
Query: 241 -AKDFIQS 247
A+++IQS
Sbjct: 250 SARNYIQS 257
>pdb|3PY3|A Chain A, Crystal Structure Of Phosphorylated P38alpha Map Kinase
Length = 380
Score = 74.3 bits (181), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 61/248 (24%), Positives = 118/248 (47%), Gaps = 26/248 (10%)
Query: 8 NGGYQTLIFCMPSR-GKFASVRKCTHKITKVEYAAKFIRKRRRSMDQMQDILHEAAVLYL 66
+G Y ++ ++ G +V+K + + +A + R+ R L
Sbjct: 52 SGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELR---------------LLK 96
Query: 67 AQKSERIVGLHEIYETPHEM-----VLVLEMVPDGELQRLVDIQDGIPEQDTRSYMKQIL 121
K E ++GL +++ + V ++ + +L +V Q + + + + QIL
Sbjct: 97 HMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK-LTDDHVQFLIYQIL 155
Query: 122 EALAFLHDHNITHLDLKPQNILLTKDNNIKLCDFGISRVVNDVVEVKEIIGTPDYVAPEV 181
L ++H +I H DLKP N+ + +D +K+ DFG++R +D E+ + T Y APE+
Sbjct: 156 RGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDD--EMXGXVATRWYRAPEI 213
Query: 182 -LSYEPISLATDMWSVGVLAYVLLSSHSPFAGDNKQETFLNISQCNFSFHEDLFGHISSQ 240
L++ + D+WSVG + LL+ + F G + + I + + +L ISS+
Sbjct: 214 MLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSE 273
Query: 241 -AKDFIQS 247
A+++IQS
Sbjct: 274 SARNYIQS 281
>pdb|3ALN|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALN|B Chain B, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALN|C Chain C, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALO|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Ternary Complex With Amp-Pnp And P38 Peptide
pdb|3VUT|A Chain A, Crystal Structures Of Non-Phosphorylated Map2k4
pdb|3VUT|B Chain B, Crystal Structures Of Non-Phosphorylated Map2k4
Length = 327
Score = 74.3 bits (181), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 60/204 (29%), Positives = 95/204 (46%), Gaps = 10/204 (4%)
Query: 20 SRGKFASVRKCTHKITKVEYAAKFIRKRRRSMDQMQDILHEAAVLYLAQKSERIVGLHEI 79
RG + SV K HK + A K IR +Q Q +L + V+ + IV +
Sbjct: 31 GRGAYGSVNKMVHKPSGQIMAVKRIRSTVDEKEQKQ-LLMDLDVVMRSSDCPYIVQFYGA 89
Query: 80 YETPHEMVLVLEMVPDG--ELQRLVD--IQDGIPEQDTRSYMKQILEALAFLHDH-NITH 134
+ + +E++ + + V + D IPE+ ++AL L ++ I H
Sbjct: 90 LFREGDCWICMELMSTSFDKFYKYVYSVLDDVIPEEILGKITLATVKALNHLKENLKIIH 149
Query: 135 LDLKPQNILLTKDNNIKLCDFGISRVVNDVVEVKEIIGTPDYVAPEVL----SYEPISLA 190
D+KP NILL + NIKLCDFGIS + D + G Y+APE + S + +
Sbjct: 150 RDIKPSNILLDRSGNIKLCDFGISGQLVDSIAKTRDAGCRPYMAPERIDPSASRQGYDVR 209
Query: 191 TDMWSVGVLAYVLLSSHSPFAGDN 214
+D+WS+G+ Y L + P+ N
Sbjct: 210 SDVWSLGITLYELATGRFPYPKWN 233
>pdb|1LEW|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Nuclear Substrate Mef2a
pdb|1LEZ|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Activator Mkk3b
Length = 360
Score = 74.3 bits (181), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 61/248 (24%), Positives = 118/248 (47%), Gaps = 26/248 (10%)
Query: 8 NGGYQTLIFCMPSR-GKFASVRKCTHKITKVEYAAKFIRKRRRSMDQMQDILHEAAVLYL 66
+G Y ++ ++ G +V+K + + +A + R+ R L
Sbjct: 32 SGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELR---------------LLK 76
Query: 67 AQKSERIVGLHEIYETPHEM-----VLVLEMVPDGELQRLVDIQDGIPEQDTRSYMKQIL 121
K E ++GL +++ + V ++ + +L +V Q + + + + QIL
Sbjct: 77 HMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK-LTDDHVQFLIYQIL 135
Query: 122 EALAFLHDHNITHLDLKPQNILLTKDNNIKLCDFGISRVVNDVVEVKEIIGTPDYVAPEV 181
L ++H +I H DLKP N+ + +D +K+ DFG++R +D E+ + T Y APE+
Sbjct: 136 RGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDD--EMTGYVATRWYRAPEI 193
Query: 182 -LSYEPISLATDMWSVGVLAYVLLSSHSPFAGDNKQETFLNISQCNFSFHEDLFGHISSQ 240
L++ + D+WSVG + LL+ + F G + + I + + +L ISS+
Sbjct: 194 MLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSE 253
Query: 241 -AKDFIQS 247
A+++IQS
Sbjct: 254 SARNYIQS 261
>pdb|3TG1|A Chain A, Crystal Structure Of P38alpha In Complex With A Mapk
Docking Partner
Length = 380
Score = 73.9 bits (180), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 61/248 (24%), Positives = 118/248 (47%), Gaps = 26/248 (10%)
Query: 8 NGGYQTLIFCMPSR-GKFASVRKCTHKITKVEYAAKFIRKRRRSMDQMQDILHEAAVLYL 66
+G Y ++ ++ G +V+K + + +A + R+ R L
Sbjct: 52 SGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELR---------------LLK 96
Query: 67 AQKSERIVGLHEIYETPHEM-----VLVLEMVPDGELQRLVDIQDGIPEQDTRSYMKQIL 121
K E ++GL +++ + V ++ + +L +V Q + + + + QIL
Sbjct: 97 HMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK-LTDDHVQFLIYQIL 155
Query: 122 EALAFLHDHNITHLDLKPQNILLTKDNNIKLCDFGISRVVNDVVEVKEIIGTPDYVAPEV 181
L ++H +I H DLKP N+ + +D +K+ DFG++R +D E+ + T Y APE+
Sbjct: 156 RGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDD--EMTGYVATRWYRAPEI 213
Query: 182 -LSYEPISLATDMWSVGVLAYVLLSSHSPFAGDNKQETFLNISQCNFSFHEDLFGHISSQ 240
L++ + D+WSVG + LL+ + F G + + I + + +L ISS+
Sbjct: 214 MLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSE 273
Query: 241 -AKDFIQS 247
A+++IQS
Sbjct: 274 SARNYIQS 281
>pdb|3SA0|A Chain A, Complex Of Erk2 With Norathyriol
pdb|4FUY|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek2
pdb|4FV0|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek3
Length = 360
Score = 73.9 bits (180), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 69/253 (27%), Positives = 121/253 (47%), Gaps = 15/253 (5%)
Query: 5 FFVNGGYQTLIFCMPSRGKFASVRKCTHKITKVEYAAKFIRKRRRSMDQMQDILHEAAVL 64
F V Y L + G + V + KV A K I Q L E +L
Sbjct: 19 FDVGPRYTNLSYI--GEGAYGMVCSAYDNVNKVRVAIKKISPFEHQT-YCQRTLREIKIL 75
Query: 65 YLAQKSERIVGLHEIYETP--HEM--VLVLEMVPDGELQRLVDIQDGIPEQDTRSYMKQI 120
L + E I+G+++I P +M V +++ + + +L +L+ Q + ++ QI
Sbjct: 76 -LRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQH-LSNDHICYFLYQI 133
Query: 121 LEALAFLHDHNITHLDLKPQNILLTKDNNIKLCDFGISRVVNDVVE----VKEIIGTPDY 176
L L ++H N+ H DLKP N+LL ++K+ DFG++RV + + + E + T Y
Sbjct: 134 LRGLKYIHSANVLHRDLKPSNLLLNTTXDLKIXDFGLARVADPDHDHTGFLTEYVATRWY 193
Query: 177 VAPEV-LSYEPISLATDMWSVGVLAYVLLSSHSPFAGDNKQETFLNI-SQCNFSFHEDLF 234
APE+ L+ + + + D+WSVG + +LS+ F G + + +I EDL
Sbjct: 194 RAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLN 253
Query: 235 GHISSQAKDFIQS 247
I+ +A++++ S
Sbjct: 254 XIINLKARNYLLS 266
>pdb|1BMK|A Chain A, The Complex Structure Of The Map Kinase P38SB218655
pdb|1P38|A Chain A, The Structure Of The Map Kinase P38 At 2.1 Angstoms
Resolution
Length = 379
Score = 73.9 bits (180), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 61/248 (24%), Positives = 118/248 (47%), Gaps = 26/248 (10%)
Query: 8 NGGYQTLIFCMPSR-GKFASVRKCTHKITKVEYAAKFIRKRRRSMDQMQDILHEAAVLYL 66
+G Y ++ ++ G +V+K + + +A + R+ R L
Sbjct: 51 SGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELR---------------LLK 95
Query: 67 AQKSERIVGLHEIYETPHEM-----VLVLEMVPDGELQRLVDIQDGIPEQDTRSYMKQIL 121
K E ++GL +++ + V ++ + +L +V Q + + + + QIL
Sbjct: 96 HMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK-LTDDHVQFLIYQIL 154
Query: 122 EALAFLHDHNITHLDLKPQNILLTKDNNIKLCDFGISRVVNDVVEVKEIIGTPDYVAPEV 181
L ++H +I H DLKP N+ + +D +K+ DFG++R +D E+ + T Y APE+
Sbjct: 155 RGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDD--EMTGYVATRWYRAPEI 212
Query: 182 -LSYEPISLATDMWSVGVLAYVLLSSHSPFAGDNKQETFLNISQCNFSFHEDLFGHISSQ 240
L++ + D+WSVG + LL+ + F G + + I + + +L ISS+
Sbjct: 213 MLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSE 272
Query: 241 -AKDFIQS 247
A+++IQS
Sbjct: 273 SARNYIQS 280
>pdb|3P4K|A Chain A, The Third Conformation Of P38a Map Kinase Observed In
Phosphorylated P38a And In Solution
Length = 370
Score = 73.9 bits (180), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 61/248 (24%), Positives = 118/248 (47%), Gaps = 26/248 (10%)
Query: 8 NGGYQTLIFCMPSR-GKFASVRKCTHKITKVEYAAKFIRKRRRSMDQMQDILHEAAVLYL 66
+G Y ++ ++ G +V+K + + +A + R+ R L
Sbjct: 42 SGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELR---------------LLK 86
Query: 67 AQKSERIVGLHEIYETPHEM-----VLVLEMVPDGELQRLVDIQDGIPEQDTRSYMKQIL 121
K E ++GL +++ + V ++ + +L +V Q + + + + QIL
Sbjct: 87 HMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK-LTDDHVQFLIYQIL 145
Query: 122 EALAFLHDHNITHLDLKPQNILLTKDNNIKLCDFGISRVVNDVVEVKEIIGTPDYVAPEV 181
L ++H +I H DLKP N+ + +D +K+ DFG++R +D E+ + T Y APE+
Sbjct: 146 RGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDD--EMTGYVATRWYRAPEI 203
Query: 182 -LSYEPISLATDMWSVGVLAYVLLSSHSPFAGDNKQETFLNISQCNFSFHEDLFGHISSQ 240
L++ + D+WSVG + LL+ + F G + + I + + +L ISS+
Sbjct: 204 MLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSE 263
Query: 241 -AKDFIQS 247
A+++IQS
Sbjct: 264 SARNYIQS 271
>pdb|2F9G|A Chain A, Crystal Structure Of Fus3 Phosphorylated On Tyr182
Length = 353
Score = 73.9 bits (180), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 64/250 (25%), Positives = 116/250 (46%), Gaps = 33/250 (13%)
Query: 22 GKFASVRKCTHK-------ITKVEYAAK--FIRKRRRSMDQMQDILHEAAV-LYLAQKSE 71
G + V THK I K+E K F + R + ++ HE + ++ Q+ +
Sbjct: 22 GAYGVVCSATHKPTGEIVAIKKIEPFDKPLFALRTLREIKILKHFKHENIITIFNIQRPD 81
Query: 72 RIVGLHEIYETPHEMVLVLEMVPDGELQRLVDIQDGIPEQDTRSYMKQILEALAFLHDHN 131
+E+Y +++ + +L R++ Q + + + ++ Q L A+ LH N
Sbjct: 82 SFENFNEVY--------IIQELMQTDLHRVISTQ-MLSDDHIQYFIYQTLRAVKVLHGSN 132
Query: 132 ITHLDLKPQNILLTKDNNIKLCDFGISRVVNDVVE-----------VKEIIGTPDYVAPE 180
+ H DLKP N+L+ + ++K+CDFG++R++++ + E + T Y APE
Sbjct: 133 VIHRDLKPSNLLINSNCDLKVCDFGLARIIDESAADNSEPTGQQSGMTEXVATRWYRAPE 192
Query: 181 V-LSYEPISLATDMWSVGVLAYVLLSSHSPFAGDNKQETFLNISQCNFSFHE--DLFGHI 237
V L+ S A D+WS G + L F G + + L I + H DL
Sbjct: 193 VMLTSAKYSRAMDVWSCGCILAELFLRRPIFPGRDYRHQLLLIFGIIGTPHSDNDLRCIE 252
Query: 238 SSQAKDFIQS 247
S +A+++I+S
Sbjct: 253 SPRAREYIKS 262
>pdb|2OZA|B Chain B, Structure Of P38alpha Complex
pdb|3P78|A Chain A, P38 Inhibitor-Bound
pdb|3P79|A Chain A, P38 Inhibitor-Bound
pdb|3P7A|A Chain A, P38 Inhibitor-Bound
pdb|3P7B|A Chain A, P38 Inhibitor-Bound
pdb|3P7C|A Chain A, P38 Inhibitor-Bound
pdb|3P5K|A Chain A, P38 Inhibitor-Bound
Length = 366
Score = 73.9 bits (180), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 61/248 (24%), Positives = 118/248 (47%), Gaps = 26/248 (10%)
Query: 8 NGGYQTLIFCMPSR-GKFASVRKCTHKITKVEYAAKFIRKRRRSMDQMQDILHEAAVLYL 66
+G Y ++ ++ G +V+K + + +A + R+ R L
Sbjct: 38 SGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELR---------------LLK 82
Query: 67 AQKSERIVGLHEIYETPHEM-----VLVLEMVPDGELQRLVDIQDGIPEQDTRSYMKQIL 121
K E ++GL +++ + V ++ + +L +V Q + + + + QIL
Sbjct: 83 HMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK-LTDDHVQFLIYQIL 141
Query: 122 EALAFLHDHNITHLDLKPQNILLTKDNNIKLCDFGISRVVNDVVEVKEIIGTPDYVAPEV 181
L ++H +I H DLKP N+ + +D +K+ DFG++R +D E+ + T Y APE+
Sbjct: 142 RGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDD--EMTGYVATRWYRAPEI 199
Query: 182 -LSYEPISLATDMWSVGVLAYVLLSSHSPFAGDNKQETFLNISQCNFSFHEDLFGHISSQ 240
L++ + D+WSVG + LL+ + F G + + I + + +L ISS+
Sbjct: 200 MLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSE 259
Query: 241 -AKDFIQS 247
A+++IQS
Sbjct: 260 SARNYIQS 267
>pdb|3DBQ|A Chain A, Crystal Structure Of Ttk Kinase Domain
Length = 343
Score = 73.9 bits (180), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 65/234 (27%), Positives = 108/234 (46%), Gaps = 26/234 (11%)
Query: 39 YAAKFIRKRRRSMDQMQDILHEAAVL-YLAQKSERIVGLHEIYETPHEMVLVLEMVPDGE 97
YA K++ + +E A L L Q S++I+ L++ YE + + ++ + +
Sbjct: 36 YAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYD-YEITDQYIYMVMECGNID 94
Query: 98 LQRLVDIQDGIPEQDTRSYMKQILEALAFLHDHNITHLDLKPQNILLTKDNNIKLCDFGI 157
L + + I + +SY K +LEA+ +H H I H DLKP N L+ D +KL DFGI
Sbjct: 95 LNSWLKKKKSIDPWERKSYWKNMLEAVHTIHQHGIVHSDLKPANFLIV-DGMLKLIDFGI 153
Query: 158 SRVVN-DVVEV--KEIIGTPDYVAPEVLSYEPIS-----------LATDMWSVGVLAYVL 203
+ + D V +GT +Y+ PE + S +D+WS+G + Y +
Sbjct: 154 ANQMQPDTTSVVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYM 213
Query: 204 LSSHSPFAGDNKQETFLNISQCNFSF---HEDLFGHISSQ-AKDFIQSCLVTDP 253
+PF Q+ IS+ + HE F I + +D ++ CL DP
Sbjct: 214 TYGKTPF-----QQIINQISKLHAIIDPNHEIEFPDIPEKDLQDVLKCCLKRDP 262
>pdb|2B9F|A Chain A, Crystal Structure Of Non-Phosphorylated Fus3
Length = 353
Score = 73.9 bits (180), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 64/250 (25%), Positives = 116/250 (46%), Gaps = 33/250 (13%)
Query: 22 GKFASVRKCTHK-------ITKVEYAAK--FIRKRRRSMDQMQDILHEAAV-LYLAQKSE 71
G + V THK I K+E K F + R + ++ HE + ++ Q+ +
Sbjct: 22 GAYGVVCSATHKPTGEIVAIKKIEPFDKPLFALRTLREIKILKHFKHENIITIFNIQRPD 81
Query: 72 RIVGLHEIYETPHEMVLVLEMVPDGELQRLVDIQDGIPEQDTRSYMKQILEALAFLHDHN 131
+E+Y +++ + +L R++ Q + + + ++ Q L A+ LH N
Sbjct: 82 SFENFNEVY--------IIQELMQTDLHRVISTQ-MLSDDHIQYFIYQTLRAVKVLHGSN 132
Query: 132 ITHLDLKPQNILLTKDNNIKLCDFGISRVVNDVVE-----------VKEIIGTPDYVAPE 180
+ H DLKP N+L+ + ++K+CDFG++R++++ + E + T Y APE
Sbjct: 133 VIHRDLKPSNLLINSNCDLKVCDFGLARIIDESAADNSEPTGQQSGMTEYVATRWYRAPE 192
Query: 181 V-LSYEPISLATDMWSVGVLAYVLLSSHSPFAGDNKQETFLNISQCNFSFHE--DLFGHI 237
V L+ S A D+WS G + L F G + + L I + H DL
Sbjct: 193 VMLTSAKYSRAMDVWSCGCILAELFLRRPIFPGRDYRHQLLLIFGIIGTPHSDNDLRCIE 252
Query: 238 SSQAKDFIQS 247
S +A+++I+S
Sbjct: 253 SPRAREYIKS 262
>pdb|2QKR|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Indirubin 3'-Monoxime Bound
Length = 313
Score = 73.9 bits (180), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 56/203 (27%), Positives = 100/203 (49%), Gaps = 15/203 (7%)
Query: 23 KFASVRKCTHKITKVEYAAK-----FIRKRRRSMDQMQDILHEAAVLYLAQKSE----RI 73
K+ + K V Y AK + +R +D + + A+ ++ E I
Sbjct: 22 KYQKLEKVGEGTYGVVYKAKDSQGRIVALKRIRLDAEDEGIPSTAIREISLLKELHHPNI 81
Query: 74 VGLHEIYETPHEMVLVLEMVPDGELQRLVD-IQDGIPEQDTRSYMKQILEALAFLHDHNI 132
V L ++ + + LV E + + +L++++D + G+ + + Y+ Q+L +A H H I
Sbjct: 82 VSLIDVIHSERCLTLVFEFM-EKDLKKVLDENKTGLQDSQIKIYLYQLLRGVAHCHQHRI 140
Query: 133 THLDLKPQNILLTKDNNIKLCDFGISRVVNDVVE--VKEIIGTPDYVAPEVL-SYEPISL 189
H DLKPQN+L+ D +KL DFG++R V E++ T Y AP+VL + S
Sbjct: 141 LHRDLKPQNLLINSDGALKLADFGLARAFGIPVRSYTHEVV-TLWYRAPDVLMGSKKYST 199
Query: 190 ATDMWSVGVLAYVLLSSHSPFAG 212
+ D+WS+G + +++ F G
Sbjct: 200 SVDIWSIGCIFAEMITGKPLFPG 222
>pdb|2FSO|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a)
Activating Mutant
Length = 367
Score = 73.9 bits (180), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 61/233 (26%), Positives = 113/233 (48%), Gaps = 11/233 (4%)
Query: 22 GKFASVRKCTHKITKVEYAAKFIRKRRRSMDQMQDILHEAAVLYLAQKSERIVGLHEIYE 81
G + SV T + A K + + +S+ + E +L K E ++GL +++
Sbjct: 40 GAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLK-HMKHENVIGLLDVFT 98
Query: 82 TPHEM-----VLVLEMVPDGELQRLVDIQDGIPEQDTRSYMKQILEALAFLHDHNITHLD 136
+ V ++ + +L +V Q + + + + QIL L ++H +I H D
Sbjct: 99 PARSLEEFNDVYLVTHLMGADLNNIVKCQK-LTDDHVQFLIYQILRGLKYIHSADIIHRD 157
Query: 137 LKPQNILLTKDNNIKLCDFGISRVVNDVVEVKEIIGTPDYVAPEV-LSYEPISLATDMWS 195
LKP N+ + +D +K+ DFG++R D E+ + T Y APE+ L++ + D+WS
Sbjct: 158 LKPSNLAVNEDCELKILDFGLARHTAD--EMTGYVATRWYRAPEIMLNWMHYNQTVDIWS 215
Query: 196 VGVLAYVLLSSHSPFAGDNKQETFLNISQCNFSFHEDLFGHISSQ-AKDFIQS 247
VG + LL+ + F G + + I + + +L ISS+ A+++IQS
Sbjct: 216 VGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQS 268
>pdb|2FST|X Chain X, Mitogen Activated Protein Kinase P38alpha (d176a+f327l)
Activating Mutant
Length = 367
Score = 73.6 bits (179), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 61/233 (26%), Positives = 113/233 (48%), Gaps = 11/233 (4%)
Query: 22 GKFASVRKCTHKITKVEYAAKFIRKRRRSMDQMQDILHEAAVLYLAQKSERIVGLHEIYE 81
G + SV T + A K + + +S+ + E +L K E ++GL +++
Sbjct: 40 GAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLK-HMKHENVIGLLDVFT 98
Query: 82 TPHEM-----VLVLEMVPDGELQRLVDIQDGIPEQDTRSYMKQILEALAFLHDHNITHLD 136
+ V ++ + +L +V Q + + + + QIL L ++H +I H D
Sbjct: 99 PARSLEEFNDVYLVTHLMGADLNNIVKCQK-LTDDHVQFLIYQILRGLKYIHSADIIHRD 157
Query: 137 LKPQNILLTKDNNIKLCDFGISRVVNDVVEVKEIIGTPDYVAPEV-LSYEPISLATDMWS 195
LKP N+ + +D +K+ DFG++R D E+ + T Y APE+ L++ + D+WS
Sbjct: 158 LKPSNLAVNEDCELKILDFGLARHTAD--EMTGYVATRWYRAPEIMLNWMHYNQTVDIWS 215
Query: 196 VGVLAYVLLSSHSPFAGDNKQETFLNISQCNFSFHEDLFGHISSQ-AKDFIQS 247
VG + LL+ + F G + + I + + +L ISS+ A+++IQS
Sbjct: 216 VGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQS 268
>pdb|3VQU|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With 4- [(4-Amino-5-Cyano-6-Ethoxypyridin-2-
Yl)amino]benzamide
Length = 320
Score = 73.6 bits (179), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 65/234 (27%), Positives = 108/234 (46%), Gaps = 26/234 (11%)
Query: 39 YAAKFIRKRRRSMDQMQDILHEAAVL-YLAQKSERIVGLHEIYETPHEMVLVLEMVPDGE 97
YA K++ + +E A L L Q S++I+ L++ YE + + ++ + +
Sbjct: 35 YAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYD-YEITDQYIYMVMECGNID 93
Query: 98 LQRLVDIQDGIPEQDTRSYMKQILEALAFLHDHNITHLDLKPQNILLTKDNNIKLCDFGI 157
L + + I + +SY K +LEA+ +H H I H DLKP N L+ D +KL DFGI
Sbjct: 94 LNSWLKKKKSIDPWERKSYWKNMLEAVHTIHQHGIVHSDLKPANFLIV-DGMLKLIDFGI 152
Query: 158 SRVVN-DVVEV--KEIIGTPDYVAPEVLSYEPIS-----------LATDMWSVGVLAYVL 203
+ + D V +GT +Y+ PE + S +D+WS+G + Y +
Sbjct: 153 ANQMQPDTTSVVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYM 212
Query: 204 LSSHSPFAGDNKQETFLNISQCNFSF---HEDLFGHISSQ-AKDFIQSCLVTDP 253
+PF Q+ IS+ + HE F I + +D ++ CL DP
Sbjct: 213 TYGKTPF-----QQIINQISKLHAIIDPNHEIEFPDIPEKDLQDVLKCCLKRDP 261
>pdb|2X9E|A Chain A, Human Mps1 In Complex With Nms-P715
Length = 317
Score = 73.6 bits (179), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 65/234 (27%), Positives = 108/234 (46%), Gaps = 26/234 (11%)
Query: 39 YAAKFIRKRRRSMDQMQDILHEAAVL-YLAQKSERIVGLHEIYETPHEMVLVLEMVPDGE 97
YA K++ + +E A L L Q S++I+ L++ YE + + ++ + +
Sbjct: 39 YAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYD-YEITDQYIYMVMECGNID 97
Query: 98 LQRLVDIQDGIPEQDTRSYMKQILEALAFLHDHNITHLDLKPQNILLTKDNNIKLCDFGI 157
L + + I + +SY K +LEA+ +H H I H DLKP N L+ D +KL DFGI
Sbjct: 98 LNSWLKKKKSIDPWERKSYWKNMLEAVHTIHQHGIVHSDLKPANFLIV-DGMLKLIDFGI 156
Query: 158 SRVVN-DVVEV--KEIIGTPDYVAPEVLSYEPIS-----------LATDMWSVGVLAYVL 203
+ + D V +GT +Y+ PE + S +D+WS+G + Y +
Sbjct: 157 ANQMQPDTTSVVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYM 216
Query: 204 LSSHSPFAGDNKQETFLNISQCNFSF---HEDLFGHISSQ-AKDFIQSCLVTDP 253
+PF Q+ IS+ + HE F I + +D ++ CL DP
Sbjct: 217 TYGKTPF-----QQIINQISKLHAIIDPNHEIEFPDIPEKDLQDVLKCCLKRDP 265
>pdb|2FSL|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-A
pdb|2FSM|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-B
Length = 367
Score = 73.6 bits (179), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 61/233 (26%), Positives = 113/233 (48%), Gaps = 11/233 (4%)
Query: 22 GKFASVRKCTHKITKVEYAAKFIRKRRRSMDQMQDILHEAAVLYLAQKSERIVGLHEIYE 81
G + SV T + A K + + +S+ + E +L K E ++GL +++
Sbjct: 40 GAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLK-HMKHENVIGLLDVFT 98
Query: 82 TPHEM-----VLVLEMVPDGELQRLVDIQDGIPEQDTRSYMKQILEALAFLHDHNITHLD 136
+ V ++ + +L +V Q + + + + QIL L ++H +I H D
Sbjct: 99 PARSLEEFNDVYLVTHLMGADLNNIVKCQK-LTDDHVQFLIYQILRGLKYIHSADIIHRD 157
Query: 137 LKPQNILLTKDNNIKLCDFGISRVVNDVVEVKEIIGTPDYVAPEV-LSYEPISLATDMWS 195
LKP N+ + +D +K+ DFG++R D E+ + T Y APE+ L++ + D+WS
Sbjct: 158 LKPSNLAVNEDCELKILDFGLARHTAD--EMTGYVATRWYRAPEIMLNWMHYNQTVDIWS 215
Query: 196 VGVLAYVLLSSHSPFAGDNKQETFLNISQCNFSFHEDLFGHISSQ-AKDFIQS 247
VG + LL+ + F G + + I + + +L ISS+ A+++IQS
Sbjct: 216 VGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQS 268
>pdb|3NIZ|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Adp Bound
Length = 311
Score = 73.6 bits (179), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 56/203 (27%), Positives = 100/203 (49%), Gaps = 15/203 (7%)
Query: 23 KFASVRKCTHKITKVEYAAK-----FIRKRRRSMDQMQDILHEAAVLYLAQKSE----RI 73
K+ + K V Y AK + +R +D + + A+ ++ E I
Sbjct: 22 KYQKLEKVGEGTYGVVYKAKDSQGRIVALKRIRLDAEDEGIPSTAIREISLLKELHHPNI 81
Query: 74 VGLHEIYETPHEMVLVLEMVPDGELQRLVD-IQDGIPEQDTRSYMKQILEALAFLHDHNI 132
V L ++ + + LV E + + +L++++D + G+ + + Y+ Q+L +A H H I
Sbjct: 82 VSLIDVIHSERCLTLVFEFM-EKDLKKVLDENKTGLQDSQIKIYLYQLLRGVAHCHQHRI 140
Query: 133 THLDLKPQNILLTKDNNIKLCDFGISRVVNDVVE--VKEIIGTPDYVAPEVL-SYEPISL 189
H DLKPQN+L+ D +KL DFG++R V E++ T Y AP+VL + S
Sbjct: 141 LHRDLKPQNLLINSDGALKLADFGLARAFGIPVRSYTHEVV-TLWYRAPDVLMGSKKYST 199
Query: 190 ATDMWSVGVLAYVLLSSHSPFAG 212
+ D+WS+G + +++ F G
Sbjct: 200 SVDIWSIGCIFAEMITGKPLFPG 222
>pdb|2B9H|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Ste7
pdb|2B9I|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Msg5
pdb|2B9J|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Far1
pdb|2F49|A Chain A, Crystal Structure Of Fus3 In Complex With A Ste5 Peptide
pdb|2F49|B Chain B, Crystal Structure Of Fus3 In Complex With A Ste5 Peptide
pdb|2FA2|A Chain A, Crystal Structure Of Fus3 Without A Peptide From Ste5
pdb|2FA2|B Chain B, Crystal Structure Of Fus3 Without A Peptide From Ste5
Length = 353
Score = 73.6 bits (179), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 64/250 (25%), Positives = 116/250 (46%), Gaps = 33/250 (13%)
Query: 22 GKFASVRKCTHK-------ITKVEYAAK--FIRKRRRSMDQMQDILHEAAV-LYLAQKSE 71
G + V THK I K+E K F + R + ++ HE + ++ Q+ +
Sbjct: 22 GAYGVVCSATHKPTGEIVAIKKIEPFDKPLFALRTLREIKILKHFKHENIITIFNIQRPD 81
Query: 72 RIVGLHEIYETPHEMVLVLEMVPDGELQRLVDIQDGIPEQDTRSYMKQILEALAFLHDHN 131
+E+Y +++ + +L R++ Q + + + ++ Q L A+ LH N
Sbjct: 82 SFENFNEVY--------IIQELMQTDLHRVISTQ-MLSDDHIQYFIYQTLRAVKVLHGSN 132
Query: 132 ITHLDLKPQNILLTKDNNIKLCDFGISRVVNDVVE-----------VKEIIGTPDYVAPE 180
+ H DLKP N+L+ + ++K+CDFG++R++++ + E + T Y APE
Sbjct: 133 VIHRDLKPSNLLINSNCDLKVCDFGLARIIDESAADNSEPTGQQSGMVEFVATRWYRAPE 192
Query: 181 V-LSYEPISLATDMWSVGVLAYVLLSSHSPFAGDNKQETFLNISQCNFSFHE--DLFGHI 237
V L+ S A D+WS G + L F G + + L I + H DL
Sbjct: 193 VMLTSAKYSRAMDVWSCGCILAELFLRRPIFPGRDYRHQLLLIFGIIGTPHSDNDLRCIE 252
Query: 238 SSQAKDFIQS 247
S +A+++I+S
Sbjct: 253 SPRAREYIKS 262
>pdb|3MH2|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3O8U|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 73.6 bits (179), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 60/233 (25%), Positives = 114/233 (48%), Gaps = 11/233 (4%)
Query: 22 GKFASVRKCTHKITKVEYAAKFIRKRRRSMDQMQDILHEAAVLYLAQKSERIVGLHEIYE 81
G + SV T + A K + + +S+ + E +L K E ++GL +++
Sbjct: 33 GAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLK-HMKHENVIGLLDVFT 91
Query: 82 TPHEM-----VLVLEMVPDGELQRLVDIQDGIPEQDTRSYMKQILEALAFLHDHNITHLD 136
+ V ++ + +L +V Q + + + + QIL L ++H +I H D
Sbjct: 92 PARSLEEFNDVYLVTHLMGADLNNIVKCQK-LTDDHVQFLIYQILRGLKYIHSADIIHRD 150
Query: 137 LKPQNILLTKDNNIKLCDFGISRVVNDVVEVKEIIGTPDYVAPEV-LSYEPISLATDMWS 195
LKP N+ + +D +K+ D+G++R +D E+ + T Y APE+ L++ + D+WS
Sbjct: 151 LKPSNLAVNEDCELKILDYGLARHTDD--EMTGYVATRWYRAPEIMLNWMHYNQTVDIWS 208
Query: 196 VGVLAYVLLSSHSPFAGDNKQETFLNISQCNFSFHEDLFGHISSQ-AKDFIQS 247
VG + LL+ + F G + + I + + +L ISS+ A+++IQS
Sbjct: 209 VGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQS 261
>pdb|3CEK|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(ttk)
pdb|3GFW|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(Ttk) In Complex With A Pyrolo-Pyridin Ligand
Length = 313
Score = 73.6 bits (179), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 65/234 (27%), Positives = 108/234 (46%), Gaps = 26/234 (11%)
Query: 39 YAAKFIRKRRRSMDQMQDILHEAAVL-YLAQKSERIVGLHEIYETPHEMVLVLEMVPDGE 97
YA K++ + +E A L L Q S++I+ L++ YE + + ++ + +
Sbjct: 55 YAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYD-YEITDQYIYMVMECGNID 113
Query: 98 LQRLVDIQDGIPEQDTRSYMKQILEALAFLHDHNITHLDLKPQNILLTKDNNIKLCDFGI 157
L + + I + +SY K +LEA+ +H H I H DLKP N L+ D +KL DFGI
Sbjct: 114 LNSWLKKKKSIDPWERKSYWKNMLEAVHTIHQHGIVHSDLKPANFLIV-DGMLKLIDFGI 172
Query: 158 SRVVN-DVVEV--KEIIGTPDYVAPEVLSYEPIS-----------LATDMWSVGVLAYVL 203
+ + D V +GT +Y+ PE + S +D+WS+G + Y +
Sbjct: 173 ANQMQPDTTSVVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYM 232
Query: 204 LSSHSPFAGDNKQETFLNISQCNFSF---HEDLFGHISSQ-AKDFIQSCLVTDP 253
+PF Q+ IS+ + HE F I + +D ++ CL DP
Sbjct: 233 TYGKTPF-----QQIINQISKLHAIIDPNHEIEFPDIPEKDLQDVLKCCLKRDP 281
>pdb|3GC8|A Chain A, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
pdb|3GC8|B Chain B, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
Length = 370
Score = 73.6 bits (179), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 52/188 (27%), Positives = 99/188 (52%), Gaps = 14/188 (7%)
Query: 69 KSERIVGLHEIYETP-------HEMVLVLEMVPDGELQRLVDIQDGIPEQDTRSYMKQIL 121
K E ++GL +++ TP E+ LV ++ +L +V Q + ++ + + Q+L
Sbjct: 85 KHENVIGLLDVF-TPATSIEDFSEVYLVTTLM-GADLNNIVKCQ-ALSDEHVQFLVYQLL 141
Query: 122 EALAFLHDHNITHLDLKPQNILLTKDNNIKLCDFGISRVVNDVVEVKEIIGTPDYVAPEV 181
L ++H I H DLKP N+ + +D+ +++ DFG++R ++ E+ + T Y APE+
Sbjct: 142 RGLKYIHSAGIIHRDLKPSNVAVNEDSELRILDFGLARQADE--EMTGYVATRWYRAPEI 199
Query: 182 -LSYEPISLATDMWSVGVLAYVLLSSHSPFAGDNKQETFLNISQCNFSFHEDLFGHISSQ 240
L++ + D+WSVG + LL + F G + + I + + ++ ISS+
Sbjct: 200 MLNWMHYNQTVDIWSVGCIMAELLQGKALFPGSDYIDQLKRIMEVVGTPSPEVLAKISSE 259
Query: 241 -AKDFIQS 247
A+ +IQS
Sbjct: 260 HARTYIQS 267
>pdb|2ZMC|A Chain A, Crystal Structure Of Human Mitotic Checkpoint Kinase Mps1
Catalytic Domain Apo Form
Length = 390
Score = 73.6 bits (179), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 65/234 (27%), Positives = 108/234 (46%), Gaps = 26/234 (11%)
Query: 39 YAAKFIRKRRRSMDQMQDILHEAAVL-YLAQKSERIVGLHEIYETPHEMVLVLEMVPDGE 97
YA K++ + +E A L L Q S++I+ L++ YE + + ++ + +
Sbjct: 83 YAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYD-YEITDQYIYMVMECGNID 141
Query: 98 LQRLVDIQDGIPEQDTRSYMKQILEALAFLHDHNITHLDLKPQNILLTKDNNIKLCDFGI 157
L + + I + +SY K +LEA+ +H H I H DLKP N L+ D +KL DFGI
Sbjct: 142 LNSWLKKKKSIDPWERKSYWKNMLEAVHTIHQHGIVHSDLKPANFLIV-DGMLKLIDFGI 200
Query: 158 SRVVN-DVVEV--KEIIGTPDYVAPEVLSYEPIS-----------LATDMWSVGVLAYVL 203
+ + D V +GT +Y+ PE + S +D+WS+G + Y +
Sbjct: 201 ANQMQPDTTSVVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYM 260
Query: 204 LSSHSPFAGDNKQETFLNISQCNFSF---HEDLFGHISSQ-AKDFIQSCLVTDP 253
+PF Q+ IS+ + HE F I + +D ++ CL DP
Sbjct: 261 TYGKTPF-----QQIINQISKLHAIIDPNHEIEFPDIPEKDLQDVLKCCLKRDP 309
>pdb|4G3D|A Chain A, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|B Chain B, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|D Chain D, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|E Chain E, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
Length = 371
Score = 73.2 bits (178), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 55/198 (27%), Positives = 87/198 (43%), Gaps = 15/198 (7%)
Query: 20 SRGKFASVRKCTHKITKVEYAAKFIRKRRRSMDQMQDILHEAAVLYLAQKSERIVGLHEI 79
RG F V + K T + A K +R ++ E + S RIV L+
Sbjct: 102 GRGSFGEVHRMEDKQTGFQCAVKKVR--------LEVFRAEELMACAGLTSPRIVPLYGA 153
Query: 80 YETPHEMVLVLEMVPDGELQRLVDIQDGIPEQDTRSYMKQILEALAFLHDHNITHLDLKP 139
+ + +E++ G L +LV Q +PE Y+ Q LE L +LH I H D+K
Sbjct: 154 VREGPWVNIFMELLEGGSLGQLVKEQGCLPEDRALYYLGQALEGLEYLHSRRILHGDVKA 213
Query: 140 QNILLTKDNN-IKLCDFGISRVV------NDVVEVKEIIGTPDYVAPEVLSYEPISLATD 192
N+LL+ D + LCDFG + + ++ I GT ++APEV+ D
Sbjct: 214 DNVLLSSDGSHAALCDFGHAVCLQPDGLGKSLLTGDYIPGTETHMAPEVVLGRSCDAKVD 273
Query: 193 MWSVGVLAYVLLSSHSPF 210
+WS + +L+ P+
Sbjct: 274 VWSSCCMMLHMLNGCHPW 291
>pdb|3HMN|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With Atp
pdb|3HMO|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With The Inhibitor Staurosporine
pdb|3HMP|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With A Quinazolin Ligand Compound 4
Length = 342
Score = 73.2 bits (178), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 65/234 (27%), Positives = 108/234 (46%), Gaps = 26/234 (11%)
Query: 39 YAAKFIRKRRRSMDQMQDILHEAAVL-YLAQKSERIVGLHEIYETPHEMVLVLEMVPDGE 97
YA K++ + +E A L L Q S++I+ L++ YE + + ++ + +
Sbjct: 83 YAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYD-YEITDQYIYMVMECGNID 141
Query: 98 LQRLVDIQDGIPEQDTRSYMKQILEALAFLHDHNITHLDLKPQNILLTKDNNIKLCDFGI 157
L + + I + +SY K +LEA+ +H H I H DLKP N L+ D +KL DFGI
Sbjct: 142 LNSWLKKKKSIDPWERKSYWKNMLEAVHTIHQHGIVHSDLKPANFLIV-DGMLKLIDFGI 200
Query: 158 SRVVN-DVVEV--KEIIGTPDYVAPEVLSYEPIS-----------LATDMWSVGVLAYVL 203
+ + D V +GT +Y+ PE + S +D+WS+G + Y +
Sbjct: 201 ANQMQPDTTSVVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYM 260
Query: 204 LSSHSPFAGDNKQETFLNISQCNFSF---HEDLFGHISSQ-AKDFIQSCLVTDP 253
+PF Q+ IS+ + HE F I + +D ++ CL DP
Sbjct: 261 TYGKTPF-----QQIINQISKLHAIIDPNHEIEFPDIPEKDLQDVLKCCLKRDP 309
>pdb|3GC9|A Chain A, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
pdb|3GC9|B Chain B, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
Length = 370
Score = 73.2 bits (178), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 52/188 (27%), Positives = 99/188 (52%), Gaps = 14/188 (7%)
Query: 69 KSERIVGLHEIYETP-------HEMVLVLEMVPDGELQRLVDIQDGIPEQDTRSYMKQIL 121
K E ++GL +++ TP E+ LV ++ +L +V Q + ++ + + Q+L
Sbjct: 85 KHENVIGLLDVF-TPATSIEDFSEVYLVTTLM-GADLNNIVKSQ-ALSDEHVQFLVYQLL 141
Query: 122 EALAFLHDHNITHLDLKPQNILLTKDNNIKLCDFGISRVVNDVVEVKEIIGTPDYVAPEV 181
L ++H I H DLKP N+ + +D+ +++ DFG++R ++ E+ + T Y APE+
Sbjct: 142 RGLKYIHSAGIIHRDLKPSNVAVNEDSELRILDFGLARQADE--EMTGYVATRWYRAPEI 199
Query: 182 -LSYEPISLATDMWSVGVLAYVLLSSHSPFAGDNKQETFLNISQCNFSFHEDLFGHISSQ 240
L++ + D+WSVG + LL + F G + + I + + ++ ISS+
Sbjct: 200 MLNWMHYNQTVDIWSVGCIMAELLQGKALFPGSDYIDQLKRIMEVVGTPSPEVLAKISSE 259
Query: 241 -AKDFIQS 247
A+ +IQS
Sbjct: 260 HARTYIQS 267
>pdb|1U59|A Chain A, Crystal Structure Of The Zap-70 Kinase Domain In Complex
With Staurosporine
Length = 287
Score = 73.2 bits (178), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 54/213 (25%), Positives = 102/213 (47%), Gaps = 15/213 (7%)
Query: 22 GKFASVRKCTHKITK--VEYAAKFIRKRRRSMDQMQDILHEAAVLYLAQKSE--RIVGLH 77
G F SVR+ +++ K ++ A K +++ D ++++ EA +++ R++G+
Sbjct: 21 GNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADT-EEMMREAQIMHQLDNPYIVRLIGVC 79
Query: 78 EIYETPHEMVLVLEMVPDGELQR-LVDIQDGIPEQDTRSYMKQILEALAFLHDHNITHLD 136
+ ++LV+EM G L + LV ++ IP + + Q+ + +L + N H D
Sbjct: 80 QA----EALMLVMEMAGGGPLHKFLVGKREEIPVSNVAELLHQVSMGMKYLEEKNFVHRD 135
Query: 137 LKPQNILLTKDNNIKLCDFGISRVV--NDVVEVKEIIGTP--DYVAPEVLSYEPISLATD 192
L +N+LL + K+ DFG+S+ + +D G + APE +++ S +D
Sbjct: 136 LAARNVLLVNRHYAKISDFGLSKALGADDSYYTARSAGKWPLKWYAPECINFRKFSSRSD 195
Query: 193 MWSVGVLAYVLLS-SHSPFAGDNKQETFLNISQ 224
+WS GV + LS P+ E I Q
Sbjct: 196 VWSYGVTMWEALSYGQKPYKKMKGPEVMAFIEQ 228
>pdb|3QA8|A Chain A, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|B Chain B, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|C Chain C, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|D Chain D, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|E Chain E, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|F Chain F, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|G Chain G, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|H Chain H, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
Length = 676
Score = 72.8 bits (177), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 56/202 (27%), Positives = 100/202 (49%), Gaps = 16/202 (7%)
Query: 22 GKFASVRKCTHKITKVEYAAKFIRK------RRRSMDQMQDILHEAAVLYLAQKSERIVG 75
G F V + H+ T + A K R+ R R ++Q I+ + + E G
Sbjct: 25 GGFGYVLRWIHQDTGEQVAIKQCRQELSPKNRERWCLEIQ-IMKKLNHPNVVSAREVPDG 83
Query: 76 LHEIYETPHEM-VLVLEMVPDGELQRLVDIQD---GIPEQDTRSYMKQILEALAFLHDHN 131
L ++ P+++ +L +E G+L++ ++ + G+ E R+ + I AL +LH++
Sbjct: 84 LQKL--APNDLPLLAMEYCEGGDLRKYLNQFENCCGLKEGPIRTLLSDISSALRYLHENR 141
Query: 132 ITHLDLKPQNILLTKDNNI---KLCDFGISRVVNDVVEVKEIIGTPDYVAPEVLSYEPIS 188
I H DLKP+NI+L K+ D G ++ ++ E +GT Y+APE+L + +
Sbjct: 142 IIHRDLKPENIVLQPGPQRLIHKIIDLGYAKELDQGELCTEFVGTLQYLAPELLEQKKYT 201
Query: 189 LATDMWSVGVLAYVLLSSHSPF 210
+ D WS G LA+ ++ PF
Sbjct: 202 VTVDYWSFGTLAFECITGFRPF 223
>pdb|3RZF|A Chain A, Crystal Structure Of Inhibitor Of Kappab Kinase Beta
(I4122)
Length = 677
Score = 72.8 bits (177), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 56/202 (27%), Positives = 100/202 (49%), Gaps = 16/202 (7%)
Query: 22 GKFASVRKCTHKITKVEYAAKFIRK------RRRSMDQMQDILHEAAVLYLAQKSERIVG 75
G F V + H+ T + A K R+ R R ++Q I+ + + E G
Sbjct: 26 GGFGYVLRWIHQDTGEQVAIKQCRQELSPKNRERWCLEIQ-IMKKLNHPNVVSAREVPDG 84
Query: 76 LHEIYETPHEM-VLVLEMVPDGELQRLVDIQD---GIPEQDTRSYMKQILEALAFLHDHN 131
L ++ P+++ +L +E G+L++ ++ + G+ E R+ + I AL +LH++
Sbjct: 85 LQKL--APNDLPLLAMEYCEGGDLRKYLNQFENCCGLKEGPIRTLLSDISSALRYLHENR 142
Query: 132 ITHLDLKPQNILLTKDNNI---KLCDFGISRVVNDVVEVKEIIGTPDYVAPEVLSYEPIS 188
I H DLKP+NI+L K+ D G ++ ++ E +GT Y+APE+L + +
Sbjct: 143 IIHRDLKPENIVLQPGPQRLIHKIIDLGYAKELDQGELCTEFVGTLQYLAPELLEQKKYT 202
Query: 189 LATDMWSVGVLAYVLLSSHSPF 210
+ D WS G LA+ ++ PF
Sbjct: 203 VTVDYWSFGTLAFECITGFRPF 224
>pdb|3H9F|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(Ttk) In Complex With A Pyrimido-Diazepin Ligand
Length = 313
Score = 72.8 bits (177), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 65/235 (27%), Positives = 110/235 (46%), Gaps = 28/235 (11%)
Query: 39 YAAKFIRKRRRSMDQMQDILHEAAVL-YLAQKSERIVGLHEIYETPHEMVLVLEMVPDGE 97
YA K++ + +E A L L Q S++I+ L++ YE + + ++ + +
Sbjct: 55 YAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYD-YEITDQYIYMVMECGNID 113
Query: 98 LQRLVDIQDGIPEQDTRSYMKQILEALAFLHDHNITHLDLKPQNILLTKDNNIKLCDFGI 157
L + + I + +SY K +LEA+ +H H I H DLKP N L+ D +KL DFGI
Sbjct: 114 LNSWLKKKKSIDPWERKSYWKNMLEAVHTIHQHGIVHSDLKPANFLIV-DGMLKLIDFGI 172
Query: 158 SRVVN----DVVEVKEIIGTPDYVAPEVLSYEPIS-----------LATDMWSVGVLAYV 202
+ + VV+ + +GT +Y+ PE + S +D+WS+G + Y
Sbjct: 173 ANQMQPDXXXVVKDSQ-VGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYY 231
Query: 203 LLSSHSPFAGDNKQETFLNISQCNFSF---HEDLFGHISSQ-AKDFIQSCLVTDP 253
+ +PF Q+ IS+ + HE F I + +D ++ CL DP
Sbjct: 232 MTYGKTPF-----QQIINQISKLHAIIDPNHEIEFPDIPEKDLQDVLKCCLKRDP 281
>pdb|4E5A|X Chain X, The W197a Mutant Of P38a Map Kinase
Length = 360
Score = 72.8 bits (177), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 61/233 (26%), Positives = 113/233 (48%), Gaps = 11/233 (4%)
Query: 22 GKFASVRKCTHKITKVEYAAKFIRKRRRSMDQMQDILHEAAVLYLAQKSERIVGLHEIYE 81
G + SV T + A K + + +S+ + E +L K E ++GL +++
Sbjct: 33 GAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLK-HMKHENVIGLLDVFT 91
Query: 82 TPHEM-----VLVLEMVPDGELQRLVDIQDGIPEQDTRSYMKQILEALAFLHDHNITHLD 136
+ V ++ + +L +V Q + + + + QIL L ++H +I H D
Sbjct: 92 PARSLEEFNDVYLVTHLMGADLNNIVKCQK-LTDDHVQFLIYQILRGLKYIHSADIIHRD 150
Query: 137 LKPQNILLTKDNNIKLCDFGISRVVNDVVEVKEIIGTPDYVAPEV-LSYEPISLATDMWS 195
LKP N+ + +D +K+ DFG++R +D E+ + T Y APE+ L+ + D+WS
Sbjct: 151 LKPSNLAVNEDCELKILDFGLARHTDD--EMTGYVATRWYRAPEIMLNAMHYNQTVDIWS 208
Query: 196 VGVLAYVLLSSHSPFAGDNKQETFLNISQCNFSFHEDLFGHISSQ-AKDFIQS 247
VG + LL+ + F G + + I + + +L ISS+ A+++IQS
Sbjct: 209 VGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQS 261
>pdb|3GP0|A Chain A, Crystal Structure Of Human Mitogen Activated Protein
Kinase 11 (p38 Beta) In Complex With Nilotinib
Length = 348
Score = 72.4 bits (176), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 52/188 (27%), Positives = 98/188 (52%), Gaps = 14/188 (7%)
Query: 69 KSERIVGLHEIYETP-------HEMVLVLEMVPDGELQRLVDIQDGIPEQDTRSYMKQIL 121
K E ++GL +++ TP E+ LV ++ +L +V Q + ++ + + Q+L
Sbjct: 77 KHENVIGLLDVF-TPATSIEDFSEVYLVTTLM-GADLNNIVKCQ-ALSDEHVQFLVYQLL 133
Query: 122 EALAFLHDHNITHLDLKPQNILLTKDNNIKLCDFGISRVVNDVVEVKEIIGTPDYVAPEV 181
L ++H I H DLKP N+ + +D +++ DFG++R ++ E+ + T Y APE+
Sbjct: 134 RGLKYIHSAGIIHRDLKPSNVAVNEDCELRILDFGLARQADE--EMTGYVATRWYRAPEI 191
Query: 182 -LSYEPISLATDMWSVGVLAYVLLSSHSPFAGDNKQETFLNISQCNFSFHEDLFGHISSQ 240
L++ + D+WSVG + LL + F G + + I + + ++ ISS+
Sbjct: 192 MLNWMHYNQTVDIWSVGCIMAELLQGKALFPGSDYIDQLKRIMEVVGTPSPEVLAKISSE 251
Query: 241 -AKDFIQS 247
A+ +IQS
Sbjct: 252 HARTYIQS 259
>pdb|2WTK|C Chain C, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
pdb|2WTK|F Chain F, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
Length = 305
Score = 72.4 bits (176), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 45/176 (25%), Positives = 81/176 (46%), Gaps = 14/176 (7%)
Query: 81 ETPHEMVLVLEMVPDGELQRLVDIQDGIPEQ-----DTRSYMKQILEALAFLHDHNITHL 135
E +M +V+E G + ++ D +PE+ Y Q+++ L +LH I H
Sbjct: 78 EEKQKMYMVMEYCVCG----MQEMLDSVPEKRFPVCQAHGYFCQLIDGLEYLHSQGIVHK 133
Query: 136 DLKPQNILLTKDNNIKLCDFGISRVVNDVVE---VKEIIGTPDYVAPEVLSYEPI--SLA 190
D+KP N+LLT +K+ G++ ++ + G+P + PE+ +
Sbjct: 134 DIKPGNLLLTTGGTLKISALGVAEALHPFAADDTCRTSQGSPAFQPPEIANGLDTFSGFK 193
Query: 191 TDMWSVGVLAYVLLSSHSPFAGDNKQETFLNISQCNFSFHEDLFGHISSQAKDFIQ 246
D+WS GV Y + + PF GDN + F NI + +++ D +S K ++
Sbjct: 194 VDIWSAGVTLYNITTGLYPFEGDNIYKLFENIGKGSYAIPGDCGPPLSDLLKGMLE 249
>pdb|2VX3|A Chain A, Crystal Structure Of The Human Dual Specificity Tyrosine-
Phosphorylation-Regulated Kinase 1a
pdb|2VX3|B Chain B, Crystal Structure Of The Human Dual Specificity Tyrosine-
Phosphorylation-Regulated Kinase 1a
pdb|2VX3|C Chain C, Crystal Structure Of The Human Dual Specificity Tyrosine-
Phosphorylation-Regulated Kinase 1a
pdb|2VX3|D Chain D, Crystal Structure Of The Human Dual Specificity Tyrosine-
Phosphorylation-Regulated Kinase 1a
pdb|2WO6|A Chain A, Human Dual-Specificity Tyrosine-Phosphorylation-Regulated
Kinase 1a In Complex With A Consensus Substrate Peptide
pdb|2WO6|B Chain B, Human Dual-Specificity Tyrosine-Phosphorylation-Regulated
Kinase 1a In Complex With A Consensus Substrate Peptide
Length = 382
Score = 72.4 bits (176), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 64/207 (30%), Positives = 102/207 (49%), Gaps = 17/207 (8%)
Query: 20 SRGKFASVRKCTHKITKVEYAAKFIRKRRRSMDQMQDILHEAAVLYLAQKSER-----IV 74
+G F V K ++ + A K I+ ++ ++Q Q E +L L K + IV
Sbjct: 63 GKGSFGQVVKAYDRVEQEWVAIKIIKNKKAFLNQAQI---EVRLLELMNKHDTEMKYYIV 119
Query: 75 GLHEIYETPHEMVLVLEMVPDG--ELQRLVDIQDGIPEQDTRSYMKQILEALAFLH--DH 130
L + + + LV EM+ +L R + + G+ TR + +Q+ AL FL +
Sbjct: 120 HLKRHFMFRNHLCLVFEMLSYNLYDLLRNTNFR-GVSLNLTRKFAQQMCTALLFLATPEL 178
Query: 131 NITHLDLKPQNILL--TKDNNIKLCDFGISRVVNDVVEVKEIIGTPDYVAPEVLSYEPIS 188
+I H DLKP+NILL K + IK+ DFG S + + + I + Y +PEVL P
Sbjct: 179 SIIHCDLKPENILLCNPKRSAIKIVDFGSSCQLGQ--RIYQXIQSRFYRSPEVLLGMPYD 236
Query: 189 LATDMWSVGVLAYVLLSSHSPFAGDNK 215
LA DMWS+G + + + F+G N+
Sbjct: 237 LAIDMWSLGCILVEMHTGEPLFSGANE 263
>pdb|3DLS|A Chain A, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|B Chain B, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|C Chain C, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|D Chain D, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|E Chain E, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|F Chain F, Crystal Structure Of Human Pas Kinase Bound To Adp
Length = 335
Score = 72.4 bits (176), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 57/197 (28%), Positives = 91/197 (46%), Gaps = 9/197 (4%)
Query: 22 GKFASVRKCTHKITKVEYAAKFIRKRRRSMD------QMQDILHEAAVLYLAQKSERIVG 75
G F V K E KFI+K + D ++ + E A+L + + I+
Sbjct: 35 GAFGFVWTAVDKEKNKEVVVKFIKKEKVLEDCWIEDPKLGKVTLEIAILSRVEHA-NIIK 93
Query: 76 LHEIYETPHEMVLVLEMVPDG-ELQRLVDIQDGIPEQDTRSYMKQILEALAFLHDHNITH 134
+ +I+E LV+E G +L +D + E +Q++ A+ +L +I H
Sbjct: 94 VLDIFENQGFFQLVMEKHGSGLDLFAFIDRHPRLDEPLASYIFRQLVSAVGYLRLKDIIH 153
Query: 135 LDLKPQNILLTKDNNIKLCDFGISRVVNDVVEVKEIIGTPDYVAPEVLSYEPI-SLATDM 193
D+K +NI++ +D IKL DFG + + GT +Y APEVL P +M
Sbjct: 154 RDIKDENIVIAEDFTIKLIDFGSAAYLERGKLFYTFCGTIEYCAPEVLMGNPYRGPELEM 213
Query: 194 WSVGVLAYVLLSSHSPF 210
WS+GV Y L+ +PF
Sbjct: 214 WSLGVTLYTLVFEENPF 230
>pdb|3UIB|A Chain A, Map Kinase Lmampk10 From Leishmania Major In Complex With
Sb203580
Length = 362
Score = 72.4 bits (176), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 56/192 (29%), Positives = 90/192 (46%), Gaps = 15/192 (7%)
Query: 73 IVGLHEIY---ETP--HEMVLVLEMVPDGELQRLVDIQDGIPEQDTRSYMKQILEALAFL 127
I+GL +I+ E P H++ LV E++ Q + D + I Q + +M IL L L
Sbjct: 91 ILGLRDIFVHFEEPAMHKLYLVTELMRTDLAQVIHDQRIVISPQHIQYFMYHILLGLHVL 150
Query: 128 HDHNITHLDLKPQNILLTKDNNIKLCDFGISRVVNDVVEVKEIIGTPDYVAPE-VLSYEP 186
H+ + H DL P NILL +N+I +CDF ++R + Y APE V+ ++
Sbjct: 151 HEAGVVHRDLHPGNILLADNNDITICDFNLAREDTADANKTHYVTHRWYRAPELVMQFKG 210
Query: 187 ISLATDMWSVGVLAYVLLSSHSPFAGDNKQETFLN-----ISQCNFSFHEDLFGHISSQA 241
+ DMWS G + + + + F G TF N + ED+ S A
Sbjct: 211 FTKLVDMWSAGCVMAEMFNRKALFRG----STFYNQLNKIVEVVGTPKIEDVVMFSSPSA 266
Query: 242 KDFIQSCLVTDP 253
+D++++ L P
Sbjct: 267 RDYLRNSLSNVP 278
>pdb|3PG1|A Chain A, Map Kinase Lmampk10 From Leishmania Major (1.95 Angs
Resolution)
Length = 362
Score = 72.4 bits (176), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 56/192 (29%), Positives = 90/192 (46%), Gaps = 15/192 (7%)
Query: 73 IVGLHEIY---ETP--HEMVLVLEMVPDGELQRLVDIQDGIPEQDTRSYMKQILEALAFL 127
I+GL +I+ E P H++ LV E++ Q + D + I Q + +M IL L L
Sbjct: 91 ILGLRDIFVHFEEPAMHKLYLVTELMRTDLAQVIHDQRIVISPQHIQYFMYHILLGLHVL 150
Query: 128 HDHNITHLDLKPQNILLTKDNNIKLCDFGISRVVNDVVEVKEIIGTPDYVAPE-VLSYEP 186
H+ + H DL P NILL +N+I +CDF ++R + Y APE V+ ++
Sbjct: 151 HEAGVVHRDLHPGNILLADNNDITICDFNLAREDTADANKTHYVTHRWYRAPELVMQFKG 210
Query: 187 ISLATDMWSVGVLAYVLLSSHSPFAGDNKQETFLN-----ISQCNFSFHEDLFGHISSQA 241
+ DMWS G + + + + F G TF N + ED+ S A
Sbjct: 211 FTKLVDMWSAGCVMAEMFNRKALFRG----STFYNQLNKIVEVVGTPKIEDVVMFSSPSA 266
Query: 242 KDFIQSCLVTDP 253
+D++++ L P
Sbjct: 267 RDYLRNSLSNVP 278
>pdb|3O8P|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
pdb|3MPA|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 72.0 bits (175), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 60/233 (25%), Positives = 113/233 (48%), Gaps = 11/233 (4%)
Query: 22 GKFASVRKCTHKITKVEYAAKFIRKRRRSMDQMQDILHEAAVLYLAQKSERIVGLHEIYE 81
G + SV T + A K + + +S+ + E +L K E ++GL +++
Sbjct: 33 GAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLK-HMKHENVIGLLDVFT 91
Query: 82 TPHEM-----VLVLEMVPDGELQRLVDIQDGIPEQDTRSYMKQILEALAFLHDHNITHLD 136
+ V ++ + +L +V Q + + + + QIL L ++H +I H D
Sbjct: 92 PARSLEEFNDVYLVTHLMGADLNNIVKCQK-LTDDHVQFLIYQILRGLKYIHSADIIHRD 150
Query: 137 LKPQNILLTKDNNIKLCDFGISRVVNDVVEVKEIIGTPDYVAPEV-LSYEPISLATDMWS 195
LKP N+ + +D +K+ FG++R +D E+ + T Y APE+ L++ + D+WS
Sbjct: 151 LKPSNLAVNEDCELKILGFGLARHTDD--EMTGYVATRWYRAPEIMLNWMHYNQTVDIWS 208
Query: 196 VGVLAYVLLSSHSPFAGDNKQETFLNISQCNFSFHEDLFGHISSQ-AKDFIQS 247
VG + LL+ + F G + + I + + +L ISS+ A+++IQS
Sbjct: 209 VGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQS 261
>pdb|2PUU|A Chain A, Crystal Structure Of P38 Complex With 1-(5-Tert-Butyl-2-P-
Tolyl-2h-Pyrazol-3-Yl)-3-[4-(6-Morpholin-4-Ylmethyl-
Pyridin-3-Yl)naphthalen-1-Yl]urea
pdb|3CTQ|A Chain A, Structure Of Map Kinase P38 In Complex With A
1-O-Tolyl-1,2, 3-Triazole-4-Carboxamide
Length = 348
Score = 72.0 bits (175), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 44/131 (33%), Positives = 74/131 (56%), Gaps = 4/131 (3%)
Query: 119 QILEALAFLHDHNITHLDLKPQNILLTKDNNIKLCDFGISRVVNDVVEVKEIIGTPDYVA 178
QIL L ++H +I H DLKP N+ + +D +K+ DFG++R +D E+ + T Y A
Sbjct: 129 QILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDD--EMTGYVATRWYRA 186
Query: 179 PEV-LSYEPISLATDMWSVGVLAYVLLSSHSPFAGDNKQETFLNISQCNFSFHEDLFGHI 237
PE+ L++ + D+WSVG + LL+ + F G + + I + + +L I
Sbjct: 187 PEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKI 246
Query: 238 SSQ-AKDFIQS 247
SS+ A+++IQS
Sbjct: 247 SSESARNYIQS 257
>pdb|3ANQ|A Chain A, Human Dyrk1aINHIBITOR COMPLEX
pdb|3ANQ|B Chain B, Human Dyrk1aINHIBITOR COMPLEX
pdb|3ANQ|C Chain C, Human Dyrk1aINHIBITOR COMPLEX
pdb|3ANQ|D Chain D, Human Dyrk1aINHIBITOR COMPLEX
pdb|3ANR|A Chain A, Human Dyrk1aHARMINE COMPLEX
pdb|3ANR|B Chain B, Human Dyrk1aHARMINE COMPLEX
pdb|3ANR|C Chain C, Human Dyrk1aHARMINE COMPLEX
pdb|3ANR|D Chain D, Human Dyrk1aHARMINE COMPLEX
Length = 368
Score = 72.0 bits (175), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 64/207 (30%), Positives = 102/207 (49%), Gaps = 17/207 (8%)
Query: 20 SRGKFASVRKCTHKITKVEYAAKFIRKRRRSMDQMQDILHEAAVLYLAQKSER-----IV 74
+G F V K ++ + A K I+ ++ ++Q Q E +L L K + IV
Sbjct: 44 GKGSFGQVVKAYDRVEQEWVAIKIIKNKKAFLNQAQI---EVRLLELMNKHDTEMKYYIV 100
Query: 75 GLHEIYETPHEMVLVLEMVPDG--ELQRLVDIQDGIPEQDTRSYMKQILEALAFLH--DH 130
L + + + LV EM+ +L R + + G+ TR + +Q+ AL FL +
Sbjct: 101 HLKRHFMFRNHLCLVFEMLSYNLYDLLRNTNFR-GVSLNLTRKFAQQMCTALLFLATPEL 159
Query: 131 NITHLDLKPQNILL--TKDNNIKLCDFGISRVVNDVVEVKEIIGTPDYVAPEVLSYEPIS 188
+I H DLKP+NILL K + IK+ DFG S + + + I + Y +PEVL P
Sbjct: 160 SIIHCDLKPENILLCNPKRSAIKIVDFGSSCQLGQ--RIYQXIQSRFYRSPEVLLGMPYD 217
Query: 189 LATDMWSVGVLAYVLLSSHSPFAGDNK 215
LA DMWS+G + + + F+G N+
Sbjct: 218 LAIDMWSLGCILVEMHTGEPLFSGANE 244
>pdb|4AZE|A Chain A, Human Dyrk1a In Complex With Leucettine L41
pdb|4AZE|B Chain B, Human Dyrk1a In Complex With Leucettine L41
pdb|4AZE|C Chain C, Human Dyrk1a In Complex With Leucettine L41
Length = 382
Score = 71.6 bits (174), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 64/207 (30%), Positives = 101/207 (48%), Gaps = 17/207 (8%)
Query: 20 SRGKFASVRKCTHKITKVEYAAKFIRKRRRSMDQMQDILHEAAVLYLAQKSER-----IV 74
+G F V K ++ + A K I+ ++ ++Q Q E +L L K + IV
Sbjct: 63 GKGSFGQVVKAYDRVEQEWVAIKIIKNKKAFLNQAQI---EVRLLELMNKHDTEMKYYIV 119
Query: 75 GLHEIYETPHEMVLVLEMVPDG--ELQRLVDIQDGIPEQDTRSYMKQILEALAFLH--DH 130
L + + + LV EM+ +L R + + G+ TR + +Q+ AL FL +
Sbjct: 120 HLKRHFMFRNHLCLVFEMLSYNLYDLLRNTNFR-GVSLNLTRKFAQQMCTALLFLATPEL 178
Query: 131 NITHLDLKPQNILL--TKDNNIKLCDFGISRVVNDVVEVKEIIGTPDYVAPEVLSYEPIS 188
+I H DLKP+NILL K IK+ DFG S + + + I + Y +PEVL P
Sbjct: 179 SIIHCDLKPENILLCNPKRXAIKIVDFGSSCQLGQ--RIYQXIQSRFYRSPEVLLGMPYD 236
Query: 189 LATDMWSVGVLAYVLLSSHSPFAGDNK 215
LA DMWS+G + + + F+G N+
Sbjct: 237 LAIDMWSLGCILVEMHTGEPLFSGANE 263
>pdb|3MH0|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3O8T|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg-Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 71.6 bits (174), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 60/233 (25%), Positives = 113/233 (48%), Gaps = 11/233 (4%)
Query: 22 GKFASVRKCTHKITKVEYAAKFIRKRRRSMDQMQDILHEAAVLYLAQKSERIVGLHEIYE 81
G + SV T + A K + + +S+ + E +L K E ++GL +++
Sbjct: 33 GAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLK-HMKHENVIGLLDVFT 91
Query: 82 TPHEM-----VLVLEMVPDGELQRLVDIQDGIPEQDTRSYMKQILEALAFLHDHNITHLD 136
+ V ++ + +L +V Q + + + + QIL L ++H +I H D
Sbjct: 92 PARSLEEFNDVYLVTHLMGADLNNIVKCQK-LTDDHVQFLIYQILRGLKYIHSADIIHRD 150
Query: 137 LKPQNILLTKDNNIKLCDFGISRVVNDVVEVKEIIGTPDYVAPEV-LSYEPISLATDMWS 195
LKP N+ + +D +K+ D G++R +D E+ + T Y APE+ L++ + D+WS
Sbjct: 151 LKPSNLAVNEDCELKILDAGLARHTDD--EMTGYVATRWYRAPEIMLNWMHYNQTVDIWS 208
Query: 196 VGVLAYVLLSSHSPFAGDNKQETFLNISQCNFSFHEDLFGHISSQ-AKDFIQS 247
VG + LL+ + F G + + I + + +L ISS+ A+++IQS
Sbjct: 209 VGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQS 261
>pdb|2ZMD|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain T686a
Mutant In Complex With Sp600125 Inhibitor
Length = 390
Score = 71.6 bits (174), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 64/234 (27%), Positives = 107/234 (45%), Gaps = 26/234 (11%)
Query: 39 YAAKFIRKRRRSMDQMQDILHEAAVL-YLAQKSERIVGLHEIYETPHEMVLVLEMVPDGE 97
YA K++ + +E A L L Q S++I+ L++ YE + + ++ + +
Sbjct: 83 YAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYD-YEITDQYIYMVMECGNID 141
Query: 98 LQRLVDIQDGIPEQDTRSYMKQILEALAFLHDHNITHLDLKPQNILLTKDNNIKLCDFGI 157
L + + I + +SY K +LEA+ +H H I H DLKP N L+ D +KL DFGI
Sbjct: 142 LNSWLKKKKSIDPWERKSYWKNMLEAVHTIHQHGIVHSDLKPANFLIV-DGMLKLIDFGI 200
Query: 158 SRVVN-DVVEV--KEIIGTPDYVAPEVLSYEPIS-----------LATDMWSVGVLAYVL 203
+ + D V +G +Y+ PE + S +D+WS+G + Y +
Sbjct: 201 ANQMQPDTTSVVKDSQVGAVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYM 260
Query: 204 LSSHSPFAGDNKQETFLNISQCNFSF---HEDLFGHISSQ-AKDFIQSCLVTDP 253
+PF Q+ IS+ + HE F I + +D ++ CL DP
Sbjct: 261 TYGKTPF-----QQIINQISKLHAIIDPNHEIEFPDIPEKDLQDVLKCCLKRDP 309
>pdb|1YXS|A Chain A, Crystal Structure Of Kinase Pim1 With P123m Mutation
Length = 293
Score = 71.2 bits (173), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 53/184 (28%), Positives = 90/184 (48%), Gaps = 14/184 (7%)
Query: 73 IVGLHEIYETPHEMVLVLE-MVPDGELQRLVDIQDGIPEQDTRSYMKQILEALAFLHDHN 131
++ L + +E P VL+LE M P +L + + + E+ RS+ Q+LEA+ H+
Sbjct: 75 VIRLLDWFERPDSFVLILERMEPVQDLFDFITERGALQEELARSFFWQVLEAVRHCHNCG 134
Query: 132 ITHLDLKPQNILLTKDNN-IKLCDFGISRVVNDVVEVKEIIGTPDYVAPEVLSYEPI-SL 189
+ H D+K +NIL+ + +KL DFG ++ D V + GT Y PE + Y
Sbjct: 135 VLHRDIKDENILIDLNRGELKLIDFGSGALLKDTV-YTDFDGTRVYSPPEWIRYHRYHGR 193
Query: 190 ATDMWSVGVLAYVLLSSHSPFAGDNKQETFLNISQCNFSFHEDLFGHISSQAKDFIQSCL 249
+ +WS+G+L Y ++ PF D + I + F + +SS+ + I+ CL
Sbjct: 194 SAAVWSLGILLYDMVCGDIPFEHDEE------IIRGQVFFRQ----RVSSECQHLIRWCL 243
Query: 250 VTDP 253
P
Sbjct: 244 ALRP 247
>pdb|3MH1|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3OBG|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Mutants In
Response To Inhibitor Binding
pdb|3OC1|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 71.2 bits (173), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 60/233 (25%), Positives = 113/233 (48%), Gaps = 11/233 (4%)
Query: 22 GKFASVRKCTHKITKVEYAAKFIRKRRRSMDQMQDILHEAAVLYLAQKSERIVGLHEIYE 81
G + SV T + A K + + +S+ + E +L K E ++GL +++
Sbjct: 33 GAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLK-HMKHENVIGLLDVFT 91
Query: 82 TPHEM-----VLVLEMVPDGELQRLVDIQDGIPEQDTRSYMKQILEALAFLHDHNITHLD 136
+ V ++ + +L +V Q + + + + QIL L ++H +I H D
Sbjct: 92 PARSLEEFNDVYLVTHLMGADLNNIVKCQK-LTDDHVQFLIYQILRGLKYIHSADIIHRD 150
Query: 137 LKPQNILLTKDNNIKLCDFGISRVVNDVVEVKEIIGTPDYVAPEV-LSYEPISLATDMWS 195
LKP N+ + +D +K+ D G++R +D E+ + T Y APE+ L++ + D+WS
Sbjct: 151 LKPSNLAVNEDCELKILDGGLARHTDD--EMTGYVATRWYRAPEIMLNWMHYNQTVDIWS 208
Query: 196 VGVLAYVLLSSHSPFAGDNKQETFLNISQCNFSFHEDLFGHISSQ-AKDFIQS 247
VG + LL+ + F G + + I + + +L ISS+ A+++IQS
Sbjct: 209 VGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQS 261
>pdb|3MH3|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3OBJ|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Mutants In
Response To Inhibitor Binding
Length = 360
Score = 71.2 bits (173), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 60/233 (25%), Positives = 113/233 (48%), Gaps = 11/233 (4%)
Query: 22 GKFASVRKCTHKITKVEYAAKFIRKRRRSMDQMQDILHEAAVLYLAQKSERIVGLHEIYE 81
G + SV T + A K + + +S+ + E +L K E ++GL +++
Sbjct: 33 GAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLK-HMKHENVIGLLDVFT 91
Query: 82 TPHEM-----VLVLEMVPDGELQRLVDIQDGIPEQDTRSYMKQILEALAFLHDHNITHLD 136
+ V ++ + +L +V Q + + + + QIL L ++H +I H D
Sbjct: 92 PARSLEEFNDVYLVTHLMGADLNNIVKCQK-LTDDHVQFLIYQILRGLKYIHSADIIHRD 150
Query: 137 LKPQNILLTKDNNIKLCDFGISRVVNDVVEVKEIIGTPDYVAPEV-LSYEPISLATDMWS 195
LKP N+ + +D +K+ D G++R +D E+ + T Y APE+ L++ + D+WS
Sbjct: 151 LKPSNLAVNEDCELKILDRGLARHTDD--EMTGYVATRWYRAPEIMLNWMHYNQTVDIWS 208
Query: 196 VGVLAYVLLSSHSPFAGDNKQETFLNISQCNFSFHEDLFGHISSQ-AKDFIQS 247
VG + LL+ + F G + + I + + +L ISS+ A+++IQS
Sbjct: 209 VGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQS 261
>pdb|2OZO|A Chain A, Autoinhibited Intact Human Zap-70
Length = 613
Score = 70.9 bits (172), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 53/213 (24%), Positives = 102/213 (47%), Gaps = 15/213 (7%)
Query: 22 GKFASVRKCTHKITK--VEYAAKFIRKRRRSMDQMQDILHEAAVLYLAQKSE--RIVGLH 77
G F SVR+ +++ K ++ A K +++ D ++++ EA +++ R++G+
Sbjct: 347 GNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKAD-TEEMMREAQIMHQLDNPYIVRLIGVC 405
Query: 78 EIYETPHEMVLVLEMVPDGELQR-LVDIQDGIPEQDTRSYMKQILEALAFLHDHNITHLD 136
+ ++LV+EM G L + LV ++ IP + + Q+ + +L + N H +
Sbjct: 406 QA----EALMLVMEMAGGGPLHKFLVGKREEIPVSNVAELLHQVSMGMKYLEEKNFVHRN 461
Query: 137 LKPQNILLTKDNNIKLCDFGISRVV--NDVVEVKEIIGTP--DYVAPEVLSYEPISLATD 192
L +N+LL + K+ DFG+S+ + +D G + APE +++ S +D
Sbjct: 462 LAARNVLLVNRHYAKISDFGLSKALGADDSYYTARSAGKWPLKWYAPECINFRKFSSRSD 521
Query: 193 MWSVGVLAYVLLS-SHSPFAGDNKQETFLNISQ 224
+WS GV + LS P+ E I Q
Sbjct: 522 VWSYGVTMWEALSYGQKPYKKMKGPEVMAFIEQ 554
>pdb|2DYL|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein
Kinase Kinase 7 Activated Mutant (S287d, T291d)
Length = 318
Score = 70.5 bits (171), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 60/220 (27%), Positives = 108/220 (49%), Gaps = 14/220 (6%)
Query: 44 IRKRRRSMDQMQD--ILHEAAVLYLAQKSERIVGLHEIYETPHEMVLVLEMVPDGELQRL 101
+++ RRS ++ ++ IL + V+ + IV + T ++ + +E++ +
Sbjct: 55 VKQMRRSGNKEENKRILMDLDVVLKSHDCPYIVQCFGTFITNTDVFIAMELMGTCAEKLK 114
Query: 102 VDIQDGIPEQDTRSYMKQILEALAFLHD-HNITHLDLKPQNILLTKDNNIKLCDFGIS-R 159
+Q IPE+ I++AL +L + H + H D+KP NILL + IKLCDFGIS R
Sbjct: 115 KRMQGPIPERILGKMTVAIVKALYYLKEKHGVIHRDVKPSNILLDERGQIKLCDFGISGR 174
Query: 160 VVNDVVEVKEIIGTPDYVAPEVL-----SYEPISLATDMWSVGVLAYVLLSSHSPFAGDN 214
+V+D + + G Y+APE + + + D+WS+G+ L + P+ N
Sbjct: 175 LVDDKAKDRS-AGCAAYMAPERIDPPDPTKPDYDIRADVWSLGISLVELATGQFPYK--N 231
Query: 215 KQETFLNISQCNFSFHEDLFGHI--SSQAKDFIQSCLVTD 252
+ F +++ L GH+ S + F++ CL D
Sbjct: 232 CKTDFEVLTKVLQEEPPLLPGHMGFSGDFQSFVKDCLTKD 271
>pdb|3GI3|A Chain A, Crystal Structure Of A N-Phenyl-N'-Naphthylurea Analog In
Complex With P38 Map Kinase
Length = 360
Score = 70.5 bits (171), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 60/248 (24%), Positives = 117/248 (47%), Gaps = 26/248 (10%)
Query: 8 NGGYQTLIFCMPSR-GKFASVRKCTHKITKVEYAAKFIRKRRRSMDQMQDILHEAAVLYL 66
+G Y ++ ++ G +V+K + + +A + R+ R L
Sbjct: 32 SGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELR---------------LLK 76
Query: 67 AQKSERIVGLHEIYETPHEM-----VLVLEMVPDGELQRLVDIQDGIPEQDTRSYMKQIL 121
K E ++GL +++ + V ++ + +L +V Q + + + + QIL
Sbjct: 77 HMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQ-KLTDDHVQFLIYQIL 135
Query: 122 EALAFLHDHNITHLDLKPQNILLTKDNNIKLCDFGISRVVNDVVEVKEIIGTPDYVAPEV 181
L ++H +I H DLKP N+ + +D +K+ DF ++R +D E+ + T Y APE+
Sbjct: 136 RGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFYLARHTDD--EMTGYVATRWYRAPEI 193
Query: 182 -LSYEPISLATDMWSVGVLAYVLLSSHSPFAGDNKQETFLNISQCNFSFHEDLFGHISSQ 240
L++ + D+WSVG + LL+ + F G + + I + + +L ISS+
Sbjct: 194 MLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSE 253
Query: 241 -AKDFIQS 247
A+++IQS
Sbjct: 254 SARNYIQS 261
>pdb|3OHT|A Chain A, Crystal Structure Of Salmo Salar P38alpha
pdb|3OHT|B Chain B, Crystal Structure Of Salmo Salar P38alpha
Length = 389
Score = 70.5 bits (171), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 63/246 (25%), Positives = 120/246 (48%), Gaps = 17/246 (6%)
Query: 11 YQTLIFCMPSRGKFASVRKCTHKITKVEYAAKFIRKRRRSMDQMQDILHEAAVLYLAQKS 70
YQTL G + SV + ++ A K + + +S+ + E +L K
Sbjct: 53 YQTLSPV--GSGAYGSVCSSYDVKSGLKIAVKKLSRPFQSIIHAKRTYRELRLLK-HMKH 109
Query: 71 ERIVGLHEIYETP-------HEMVLVLEMVPDGELQRLVDIQDGIPEQDTRSYMKQILEA 123
E ++GL +++ TP +++ LV ++ +L +V Q + + + + QIL
Sbjct: 110 ENVIGLLDVF-TPATSLEEFNDVYLVTHLM-GADLNNIVKCQK-LTDDHVQFLIYQILRG 166
Query: 124 LAFLHDHNITHLDLKPQNILLTKDNNIKLCDFGISRVVNDVVEVKEIIGTPDYVAPEV-L 182
L ++H +I H DLKP N+ + +D +K+ DFG++R +D E+ + T Y APE+ L
Sbjct: 167 LKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDD--EMTGYVATRWYRAPEIML 224
Query: 183 SYEPISLATDMWSVGVLAYVLLSSHSPFAGDNKQETFLNISQCNFSFHEDLFGHISS-QA 241
++ ++ D+WSVG + LL+ + F G + I + + + + S +A
Sbjct: 225 NWMHYNMTVDIWSVGCIMAELLTGRTLFPGTDHINQLQQIMRLTGTPPASVISRMPSHEA 284
Query: 242 KDFIQS 247
+++I S
Sbjct: 285 RNYINS 290
>pdb|3DAK|A Chain A, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|B Chain B, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|C Chain C, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|D Chain D, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
Length = 290
Score = 70.5 bits (171), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 50/196 (25%), Positives = 96/196 (48%), Gaps = 19/196 (9%)
Query: 30 CTHKITKVEYAAKFIRKRRRSMDQMQDILHEAAVLYLAQKSERIVGLHEIYETPHEMVLV 89
C K KV + K + SMD++ L E + IV + + E+ LV
Sbjct: 31 CAPKKEKVAIKRINLEKCQTSMDEL---LKEIQAMSQCHHP-NIVSYYTSFVVKDELWLV 86
Query: 90 LEMVPDGELQRLV-------DIQDGIPEQDT-RSYMKQILEALAFLHDHNITHLDLKPQN 141
++++ G + ++ + + G+ ++ T + ++++LE L +LH + H D+K N
Sbjct: 87 MKLLSGGSVLDIIKHIVAKGEHKSGVLDESTIATILREVLEGLEYLHKNGQIHRDVKAGN 146
Query: 142 ILLTKDNNIKLCDFGISRVVNDVVEV------KEIIGTPDYVAPEVLS-YEPISLATDMW 194
ILL +D ++++ DFG+S + ++ K +GTP ++APEV+ D+W
Sbjct: 147 ILLGEDGSVQIADFGVSAFLATGGDITRNKVRKTFVGTPCWMAPEVMEQVRGYDFKADIW 206
Query: 195 SVGVLAYVLLSSHSPF 210
S G+ A L + +P+
Sbjct: 207 SFGITAIELATGAAPY 222
>pdb|2VWI|A Chain A, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|B Chain B, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|C Chain C, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|D Chain D, Structure Of The Osr1 Kinase, A Hypertension Drug Target
Length = 303
Score = 70.5 bits (171), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 50/196 (25%), Positives = 96/196 (48%), Gaps = 19/196 (9%)
Query: 30 CTHKITKVEYAAKFIRKRRRSMDQMQDILHEAAVLYLAQKSERIVGLHEIYETPHEMVLV 89
C K KV + K + SMD++ L E + IV + + E+ LV
Sbjct: 36 CAPKKEKVAIKRINLEKCQTSMDEL---LKEIQAMSQCHHP-NIVSYYTSFVVKDELWLV 91
Query: 90 LEMVPDGELQRLV-------DIQDGIPEQDT-RSYMKQILEALAFLHDHNITHLDLKPQN 141
++++ G + ++ + + G+ ++ T + ++++LE L +LH + H D+K N
Sbjct: 92 MKLLSGGSVLDIIKHIVAKGEHKSGVLDESTIATILREVLEGLEYLHKNGQIHRDVKAGN 151
Query: 142 ILLTKDNNIKLCDFGISRVVNDVVEV------KEIIGTPDYVAPEVLS-YEPISLATDMW 194
ILL +D ++++ DFG+S + ++ K +GTP ++APEV+ D+W
Sbjct: 152 ILLGEDGSVQIADFGVSAFLATGGDITRNKVRKTFVGTPCWMAPEVMEQVRGYDFKADIW 211
Query: 195 SVGVLAYVLLSSHSPF 210
S G+ A L + +P+
Sbjct: 212 SFGITAIELATGAAPY 227
>pdb|3C4E|A Chain A, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|B Chain B, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|C Chain C, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|D Chain D, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
Length = 273
Score = 69.3 bits (168), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 52/184 (28%), Positives = 89/184 (48%), Gaps = 14/184 (7%)
Query: 73 IVGLHEIYETPHEMVLVLEMV-PDGELQRLVDIQDGIPEQDTRSYMKQILEALAFLHDHN 131
++ L + +E P VL+LE P +L + + + E+ RS+ Q+LEA+ H+
Sbjct: 71 VIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHCHNCG 130
Query: 132 ITHLDLKPQNILLTKDNN-IKLCDFGISRVVNDVVEVKEIIGTPDYVAPEVLSYEPI-SL 189
+ H D+K +NIL+ + +KL DFG ++ D V + GT Y PE + Y
Sbjct: 131 VLHRDIKDENILIDLNRGELKLIDFGSGALLKDTV-YTDFDGTRVYSPPEWIRYHRYHGR 189
Query: 190 ATDMWSVGVLAYVLLSSHSPFAGDNKQETFLNISQCNFSFHEDLFGHISSQAKDFIQSCL 249
+ +WS+G+L Y ++ PF D + I + F + +SS+ + I+ CL
Sbjct: 190 SAAVWSLGILLYDMVCGDIPFEHDEE------IIRGQVFFRQ----RVSSECQHLIRWCL 239
Query: 250 VTDP 253
P
Sbjct: 240 ALRP 243
>pdb|4DTK|A Chain A, Novel And Selective Pan-Pim Kinase Inhibitor
Length = 276
Score = 69.3 bits (168), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 52/184 (28%), Positives = 89/184 (48%), Gaps = 14/184 (7%)
Query: 73 IVGLHEIYETPHEMVLVLEMV-PDGELQRLVDIQDGIPEQDTRSYMKQILEALAFLHDHN 131
++ L + +E P VL+LE P +L + + + E+ RS+ Q+LEA+ H+
Sbjct: 74 VIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHCHNCG 133
Query: 132 ITHLDLKPQNILLTKDNN-IKLCDFGISRVVNDVVEVKEIIGTPDYVAPEVLSYEPI-SL 189
+ H D+K +NIL+ + +KL DFG ++ D V + GT Y PE + Y
Sbjct: 134 VLHRDIKDENILIDLNRGELKLIDFGSGALLKDTV-YTDFDGTRVYSPPEWIRYHRYHGR 192
Query: 190 ATDMWSVGVLAYVLLSSHSPFAGDNKQETFLNISQCNFSFHEDLFGHISSQAKDFIQSCL 249
+ +WS+G+L Y ++ PF D + I + F + +SS+ + I+ CL
Sbjct: 193 SAAVWSLGILLYDMVCGDIPFEHDEE------IIRGQVFFRQ----RVSSECQHLIRWCL 242
Query: 250 VTDP 253
P
Sbjct: 243 ALRP 246
>pdb|1UA2|A Chain A, Crystal Structure Of Human Cdk7
pdb|1UA2|B Chain B, Crystal Structure Of Human Cdk7
pdb|1UA2|C Chain C, Crystal Structure Of Human Cdk7
pdb|1UA2|D Chain D, Crystal Structure Of Human Cdk7
Length = 346
Score = 69.3 bits (168), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 63/204 (30%), Positives = 98/204 (48%), Gaps = 17/204 (8%)
Query: 11 YQTLIFCMPSRGKFASVRKCTHKITKVEYAAKFIRKRRRSMDQMQDILHEAAVLYLAQKS 70
Y+ L F G+FA+V K K T A K I+ RS + +D ++ A+ +
Sbjct: 12 YEKLDFL--GEGQFATVYKARDKNTNQIVAIKKIKLGHRS--EAKDGINRTALREIKLLQ 67
Query: 71 E----RIVGLHEIYETPHEMVLVLEMVPDGELQRLVDIQDG---IPEQDTRSYMKQILEA 123
E I+GL + + + LV + + E V I+D + ++YM L+
Sbjct: 68 ELSHPNIIGLLDAFGHKSNISLVFDFM---ETDLEVIIKDNSLVLTPSHIKAYMLMTLQG 124
Query: 124 LAFLHDHNITHLDLKPQNILLTKDNNIKLCDFGISRVVNDVVEV-KEIIGTPDYVAPEVL 182
L +LH H I H DLKP N+LL ++ +KL DFG+++ + T Y APE+L
Sbjct: 125 LEYLHQHWILHRDLKPNNLLLDENGVLKLADFGLAKSFGSPNRAYXHQVVTRWYRAPELL 184
Query: 183 -SYEPISLATDMWSVG-VLAYVLL 204
+ DMW+VG +LA +LL
Sbjct: 185 FGARMYGVGVDMWAVGCILAELLL 208
>pdb|2PML|X Chain X, Crystal Structure Of Pfpk7 In Complex With An Atp Analogue
pdb|2PMN|X Chain X, Crystal Structure Of Pfpk7 In Complex With An Atp-Site
Inhibitor
pdb|2PMO|X Chain X, Crystal Structure Of Pfpk7 In Complex With Hymenialdisine
Length = 348
Score = 69.3 bits (168), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 38/107 (35%), Positives = 62/107 (57%), Gaps = 4/107 (3%)
Query: 108 IPEQDTRSYMKQILEALAFLHDH-NITHLDLKPQNILLTKDNNIKLCDFGISRVVNDVVE 166
IP Q + +K +L + +++H+ NI H D+KP NIL+ K+ +KL DFG S + D +
Sbjct: 148 IPIQVIKCIIKSVLNSFSYIHNEKNICHRDVKPSNILMDKNGRVKLSDFGESEYMVD-KK 206
Query: 167 VKEIIGTPDYVAPEVLSYEPI--SLATDMWSVGVLAYVLLSSHSPFA 211
+K GT +++ PE S E D+WS+G+ YV+ + PF+
Sbjct: 207 IKGSRGTYEFMPPEFFSNESSYNGAKVDIWSLGICLYVMFYNVVPFS 253
>pdb|3R00|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R01|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R02|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R04|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3VBQ|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBT|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBV|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBW|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBX|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBY|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VC4|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
Length = 299
Score = 68.9 bits (167), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 52/184 (28%), Positives = 89/184 (48%), Gaps = 14/184 (7%)
Query: 73 IVGLHEIYETPHEMVLVLEMV-PDGELQRLVDIQDGIPEQDTRSYMKQILEALAFLHDHN 131
++ L + +E P VL+LE P +L + + + E+ RS+ Q+LEA+ H+
Sbjct: 76 VIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHCHNCG 135
Query: 132 ITHLDLKPQNILLTKDNN-IKLCDFGISRVVNDVVEVKEIIGTPDYVAPEVLSYEPI-SL 189
+ H D+K +NIL+ + +KL DFG ++ D V + GT Y PE + Y
Sbjct: 136 VLHRDIKDENILIDLNRGELKLIDFGSGALLKDTV-YTDFDGTRVYSPPEWIRYHRYHGR 194
Query: 190 ATDMWSVGVLAYVLLSSHSPFAGDNKQETFLNISQCNFSFHEDLFGHISSQAKDFIQSCL 249
+ +WS+G+L Y ++ PF D + I + F + +SS+ + I+ CL
Sbjct: 195 SAAVWSLGILLYDMVCGDIPFEHDEE------IIRGQVFFRQ----RVSSECQHLIRWCL 244
Query: 250 VTDP 253
P
Sbjct: 245 ALRP 248
>pdb|1YWV|A Chain A, Crystal Structures Of Proto-Oncogene Kinase Pim1: A Target
Of Aberrant Somatic Hypermutations In Diffuse Large Cell
Lymphoma
pdb|1YXT|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With Amppnp
pdb|1YXU|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|B Chain B, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|C Chain C, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|D Chain D, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXV|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With
3,4-Dihydroxy-1- Methylquinolin-2(1h)-One
pdb|1YXX|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With
(3e)-3-[(4- Hydroxyphenyl)imino]-1h-Indol-2(3h)-One
pdb|2O3P|A Chain A, Crystal Structure Of Pim1 With Quercetin
pdb|2O63|A Chain A, Crystal Structure Of Pim1 With Myricetin
pdb|2O64|A Chain A, Crystal Structure Of Pim1 With Quercetagetin
pdb|2O65|A Chain A, Crystal Structure Of Pim1 With Pentahydroxyflavone
Length = 293
Score = 68.9 bits (167), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 52/184 (28%), Positives = 89/184 (48%), Gaps = 14/184 (7%)
Query: 73 IVGLHEIYETPHEMVLVLEMV-PDGELQRLVDIQDGIPEQDTRSYMKQILEALAFLHDHN 131
++ L + +E P VL+LE P +L + + + E+ RS+ Q+LEA+ H+
Sbjct: 75 VIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHCHNCG 134
Query: 132 ITHLDLKPQNILLTKDNN-IKLCDFGISRVVNDVVEVKEIIGTPDYVAPEVLSYEPI-SL 189
+ H D+K +NIL+ + +KL DFG ++ D V + GT Y PE + Y
Sbjct: 135 VLHRDIKDENILIDLNRGELKLIDFGSGALLKDTV-YTDFDGTRVYSPPEWIRYHRYHGR 193
Query: 190 ATDMWSVGVLAYVLLSSHSPFAGDNKQETFLNISQCNFSFHEDLFGHISSQAKDFIQSCL 249
+ +WS+G+L Y ++ PF D + I + F + +SS+ + I+ CL
Sbjct: 194 SAAVWSLGILLYDMVCGDIPFEHDEE------IIRGQVFFRQ----RVSSECQHLIRWCL 243
Query: 250 VTDP 253
P
Sbjct: 244 ALRP 247
>pdb|3UIX|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Small
Molecule Inhibitor
pdb|3UMX|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Inhibitor
(Z)-2-[(1h-
Indol-3-Yl)methylene]-7-(Azepan-1-Ylmethyl)-6-
Hydroxybenzofuran- 3(2h)-One
pdb|4ENX|A Chain A, Crystal Structure Of Pim-1 Kinase In Complex With
Inhibitor (2e,5z)-2-
(2-Chlorophenylimino)-5-(4-Hydroxy-3-
Nitrobenzylidene)thiazolidin-4- One
pdb|4ENY|A Chain A, Crystal Structure Of Pim-1 Kinase In Complex With
(2e,5z)-2-(2-
Chlorophenylimino)-5-(4-Hydroxy-3-
Methoxybenzylidene)thiazolidin-4- One
pdb|3UMW|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Inhibitor
(Z)-2-[(1h-
Indazol-3-Yl)methylene]-6-Methoxy-7-(Piperazin-1-
Ylmethyl)benzofuran- 3(2h)-One
Length = 298
Score = 68.9 bits (167), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 52/184 (28%), Positives = 89/184 (48%), Gaps = 14/184 (7%)
Query: 73 IVGLHEIYETPHEMVLVLEMV-PDGELQRLVDIQDGIPEQDTRSYMKQILEALAFLHDHN 131
++ L + +E P VL+LE P +L + + + E+ RS+ Q+LEA+ H+
Sbjct: 76 VIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHCHNCG 135
Query: 132 ITHLDLKPQNILLTKDNN-IKLCDFGISRVVNDVVEVKEIIGTPDYVAPEVLSYEPI-SL 189
+ H D+K +NIL+ + +KL DFG ++ D V + GT Y PE + Y
Sbjct: 136 VLHRDIKDENILIDLNRGELKLIDFGSGALLKDTV-YTDFDGTRVYSPPEWIRYHRYHGR 194
Query: 190 ATDMWSVGVLAYVLLSSHSPFAGDNKQETFLNISQCNFSFHEDLFGHISSQAKDFIQSCL 249
+ +WS+G+L Y ++ PF D + I + F + +SS+ + I+ CL
Sbjct: 195 SAAVWSLGILLYDMVCGDIPFEHDEE------IIRGQVFFRQ----RVSSECQHLIRWCL 244
Query: 250 VTDP 253
P
Sbjct: 245 ALRP 248
>pdb|1XWS|A Chain A, Crystal Structure Of The Human Pim1 Kinase Domain
Length = 313
Score = 68.9 bits (167), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 52/184 (28%), Positives = 89/184 (48%), Gaps = 14/184 (7%)
Query: 73 IVGLHEIYETPHEMVLVLEMV-PDGELQRLVDIQDGIPEQDTRSYMKQILEALAFLHDHN 131
++ L + +E P VL+LE P +L + + + E+ RS+ Q+LEA+ H+
Sbjct: 103 VIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHCHNCG 162
Query: 132 ITHLDLKPQNILLTKDNN-IKLCDFGISRVVNDVVEVKEIIGTPDYVAPEVLSYEPI-SL 189
+ H D+K +NIL+ + +KL DFG ++ D V + GT Y PE + Y
Sbjct: 163 VLHRDIKDENILIDLNRGELKLIDFGSGALLKDTV-YTDFDGTRVYSPPEWIRYHRYHGR 221
Query: 190 ATDMWSVGVLAYVLLSSHSPFAGDNKQETFLNISQCNFSFHEDLFGHISSQAKDFIQSCL 249
+ +WS+G+L Y ++ PF D + I + F + +SS+ + I+ CL
Sbjct: 222 SAAVWSLGILLYDMVCGDIPFEHDEE------IIRGQVFFRQ----RVSSECQHLIRWCL 271
Query: 250 VTDP 253
P
Sbjct: 272 ALRP 275
>pdb|3JXW|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
pdb|3JY0|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
pdb|3JYA|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
Length = 294
Score = 68.9 bits (167), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 52/184 (28%), Positives = 89/184 (48%), Gaps = 14/184 (7%)
Query: 73 IVGLHEIYETPHEMVLVLEMV-PDGELQRLVDIQDGIPEQDTRSYMKQILEALAFLHDHN 131
++ L + +E P VL+LE P +L + + + E+ RS+ Q+LEA+ H+
Sbjct: 76 VIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHCHNCG 135
Query: 132 ITHLDLKPQNILLTKDNN-IKLCDFGISRVVNDVVEVKEIIGTPDYVAPEVLSYEPI-SL 189
+ H D+K +NIL+ + +KL DFG ++ D V + GT Y PE + Y
Sbjct: 136 VLHRDIKDENILIDLNRGELKLIDFGSGALLKDTV-YTDFDGTRVYSPPEWIRYHRYHGR 194
Query: 190 ATDMWSVGVLAYVLLSSHSPFAGDNKQETFLNISQCNFSFHEDLFGHISSQAKDFIQSCL 249
+ +WS+G+L Y ++ PF D + I + F + +SS+ + I+ CL
Sbjct: 195 SAAVWSLGILLYDMVCGDIPFEHDEE------IIRGQVFFRQ----RVSSECQHLIRWCL 244
Query: 250 VTDP 253
P
Sbjct: 245 ALRP 248
>pdb|4ALU|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1
Length = 328
Score = 68.9 bits (167), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 52/184 (28%), Positives = 89/184 (48%), Gaps = 14/184 (7%)
Query: 73 IVGLHEIYETPHEMVLVLEMV-PDGELQRLVDIQDGIPEQDTRSYMKQILEALAFLHDHN 131
++ L + +E P VL+LE P +L + + + E+ RS+ Q+LEA+ H+
Sbjct: 118 VIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHCHNCG 177
Query: 132 ITHLDLKPQNILLTKDNN-IKLCDFGISRVVNDVVEVKEIIGTPDYVAPEVLSYEPI-SL 189
+ H D+K +NIL+ + +KL DFG ++ D V + GT Y PE + Y
Sbjct: 178 VLHRDIKDENILIDLNRGELKLIDFGSGALLKDTV-YTDFDGTRVYSPPEWIRYHRYHGR 236
Query: 190 ATDMWSVGVLAYVLLSSHSPFAGDNKQETFLNISQCNFSFHEDLFGHISSQAKDFIQSCL 249
+ +WS+G+L Y ++ PF D + I + F + +SS+ + I+ CL
Sbjct: 237 SAAVWSLGILLYDMVCGDIPFEHDEE------IIRGQVFFRQ----RVSSECQHLIRWCL 286
Query: 250 VTDP 253
P
Sbjct: 287 ALRP 290
>pdb|4ALV|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1
pdb|4ALW|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1
Length = 328
Score = 68.9 bits (167), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 52/184 (28%), Positives = 89/184 (48%), Gaps = 14/184 (7%)
Query: 73 IVGLHEIYETPHEMVLVLEMV-PDGELQRLVDIQDGIPEQDTRSYMKQILEALAFLHDHN 131
++ L + +E P VL+LE P +L + + + E+ RS+ Q+LEA+ H+
Sbjct: 118 VIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHCHNCG 177
Query: 132 ITHLDLKPQNILLTKDNN-IKLCDFGISRVVNDVVEVKEIIGTPDYVAPEVLSYEPI-SL 189
+ H D+K +NIL+ + +KL DFG ++ D V + GT Y PE + Y
Sbjct: 178 VLHRDIKDENILIDLNRGELKLIDFGSGALLKDTV-YTDFDGTRVYSPPEWIRYHRYHGR 236
Query: 190 ATDMWSVGVLAYVLLSSHSPFAGDNKQETFLNISQCNFSFHEDLFGHISSQAKDFIQSCL 249
+ +WS+G+L Y ++ PF D + I + F + +SS+ + I+ CL
Sbjct: 237 SAAVWSLGILLYDMVCGDIPFEHDEE------IIRGQVFFRQ----RVSSECQHLIRWCL 286
Query: 250 VTDP 253
P
Sbjct: 287 ALRP 290
>pdb|2XJ0|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-4 From
Crystallographic Fragment Screen
Length = 301
Score = 68.9 bits (167), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 52/184 (28%), Positives = 89/184 (48%), Gaps = 14/184 (7%)
Query: 73 IVGLHEIYETPHEMVLVLEMV-PDGELQRLVDIQDGIPEQDTRSYMKQILEALAFLHDHN 131
++ L + +E P VL+LE P +L + + + E+ RS+ Q+LEA+ H+
Sbjct: 91 VIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHCHNCG 150
Query: 132 ITHLDLKPQNILLTKDNN-IKLCDFGISRVVNDVVEVKEIIGTPDYVAPEVLSYEPI-SL 189
+ H D+K +NIL+ + +KL DFG ++ D V + GT Y PE + Y
Sbjct: 151 VLHRDIKDENILIDLNRGELKLIDFGSGALLKDTV-YTDFDGTRVYSPPEWIRYHRYHGR 209
Query: 190 ATDMWSVGVLAYVLLSSHSPFAGDNKQETFLNISQCNFSFHEDLFGHISSQAKDFIQSCL 249
+ +WS+G+L Y ++ PF D + I + F + +SS+ + I+ CL
Sbjct: 210 SAAVWSLGILLYDMVCGDIPFEHDEE------IIRGQVFFRQ----RVSSECQHLIRWCL 259
Query: 250 VTDP 253
P
Sbjct: 260 ALRP 263
>pdb|3N9X|A Chain A, Crystal Structure Of Map Kinase From Plasmodium Berghei,
Pb000659.00.0
pdb|3N9X|B Chain B, Crystal Structure Of Map Kinase From Plasmodium Berghei,
Pb000659.00.0
Length = 432
Score = 68.9 bits (167), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 61/216 (28%), Positives = 103/216 (47%), Gaps = 33/216 (15%)
Query: 20 SRGKFASVRKCTHKITKVEYAAKFIRKRRRSMDQMQDILHEAAVLYLAQKSERIVGLHEI 79
RG + V K T+ A K + + + + IL E +L KS+ I+ L+++
Sbjct: 35 GRGSYGYVYLAYDKNTEKNVAIKKVNRMFEDLIDCKRILREITILN-RLKSDYIIRLYDL 93
Query: 80 YETPH------EMVLVLEMVPDGELQRLVDIQDGIPEQDTRSYMKQILEALAFLHDHNIT 133
P E+ +VLE + D +L++L + E+ ++ + +L F+H+ I
Sbjct: 94 I-IPDDLLKFDELYIVLE-IADSDLKKLFKTPIFLTEEHIKTILYNLLLGENFIHESGII 151
Query: 134 HLDLKPQNILLTKDNNIKLCDFGISR---------VVNDVVEVKEI-------------- 170
H DLKP N LL +D ++K+CDFG++R +VND+ E +E
Sbjct: 152 HRDLKPANCLLNQDCSVKVCDFGLARTINSEKDTNIVNDLEENEEPGPHNKNLKKQLTSH 211
Query: 171 IGTPDYVAPE-VLSYEPISLATDMWSVGVLAYVLLS 205
+ T Y APE +L E + + D+WS G + LL+
Sbjct: 212 VVTRWYRAPELILLQENYTKSIDIWSTGCIFAELLN 247
>pdb|1XQZ|A Chain A, Crystal Structure Of Hpim-1 Kinase At 2.1 A Resolution
pdb|1XR1|A Chain A, Crystal Structure Of Hpim-1 Kinase In Complex With Amp-Pnp
At 2.1 A Resolution
Length = 300
Score = 68.9 bits (167), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 52/184 (28%), Positives = 89/184 (48%), Gaps = 14/184 (7%)
Query: 73 IVGLHEIYETPHEMVLVLEMV-PDGELQRLVDIQDGIPEQDTRSYMKQILEALAFLHDHN 131
++ L + +E P VL+LE P +L + + + E+ RS+ Q+LEA+ H+
Sbjct: 90 VIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHCHNCG 149
Query: 132 ITHLDLKPQNILLTKDNN-IKLCDFGISRVVNDVVEVKEIIGTPDYVAPEVLSYEPI-SL 189
+ H D+K +NIL+ + +KL DFG ++ D V + GT Y PE + Y
Sbjct: 150 VLHRDIKDENILIDLNRGELKLIDFGSGALLKDTV-YTDFDGTRVYSPPEWIRYHRYHGR 208
Query: 190 ATDMWSVGVLAYVLLSSHSPFAGDNKQETFLNISQCNFSFHEDLFGHISSQAKDFIQSCL 249
+ +WS+G+L Y ++ PF D + I + F + +SS+ + I+ CL
Sbjct: 209 SAAVWSLGILLYDMVCGDIPFEHDEE------IIRGQVFFRQ----RVSSECQHLIRWCL 258
Query: 250 VTDP 253
P
Sbjct: 259 ALRP 262
>pdb|3NIE|A Chain A, Crystal Structure Of Pf11_0147
pdb|3NIE|B Chain B, Crystal Structure Of Pf11_0147
Length = 429
Score = 68.6 bits (166), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 60/219 (27%), Positives = 100/219 (45%), Gaps = 36/219 (16%)
Query: 20 SRGKFASVRKCTHKITKVEYAAKFIRKRRRSMDQMQDILHEAAVLYLAQKSERIVGLHEI 79
RG + V K A K + + + + IL E +L KS+ I+ LH++
Sbjct: 37 GRGSYGYVYLAYDKNANKNVAIKKVNRMFEDLIDCKRILREITILN-RLKSDYIIRLHDL 95
Query: 80 YETPH------EMVLVLEMVPDGELQRLVDIQDGIPEQDTRSYMKQILEALAFLHDHNIT 133
P E+ +VLE + D +L++L + EQ ++ + +L F+H+ I
Sbjct: 96 I-IPEDLLKFDELYIVLE-IADSDLKKLFKTPIFLTEQHVKTILYNLLLGEKFIHESGII 153
Query: 134 HLDLKPQNILLTKDNNIKLCDFGISRVVN---DVVEVKEI-------------------- 170
H DLKP N LL +D ++K+CDFG++R +N D+ V ++
Sbjct: 154 HRDLKPANCLLNQDCSVKICDFGLARTINSDKDIHIVNDLEEKEENEEPGPHNKNLKKQL 213
Query: 171 ---IGTPDYVAPE-VLSYEPISLATDMWSVGVLAYVLLS 205
+ T Y APE +L E + + D+WS G + LL+
Sbjct: 214 TSHVVTRWYRAPELILLQENYTNSIDIWSTGCIFAELLN 252
>pdb|4F99|A Chain A, Human Cdc7 Kinase In Complex With Dbf4 And Nucleotide
pdb|4F9A|A Chain A, Human Cdc7 Kinase In Complex With Dbf4 And Nucleotide
pdb|4F9A|C Chain C, Human Cdc7 Kinase In Complex With Dbf4 And Nucleotide
pdb|4F9B|A Chain A, Human Cdc7 Kinase In Complex With Dbf4 And Pha767491
pdb|4F9B|C Chain C, Human Cdc7 Kinase In Complex With Dbf4 And Pha767491
pdb|4F9C|A Chain A, Human Cdc7 Kinase In Complex With Dbf4 And Xl413
Length = 361
Score = 68.6 bits (166), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 51/185 (27%), Positives = 79/185 (42%), Gaps = 34/185 (18%)
Query: 57 ILHEAAVLYLAQKSERIVGLHEIYETPHEMVLVLEMVPDGELQRLVDIQDGIPEQDTRSY 116
I E L +A + ++G+ + +V+ + P E + +DI + + Q+ R Y
Sbjct: 66 IAAELQCLTVAGGQDNVMGVKYCFRKNDHVVIAM---PYLEHESFLDILNSLSFQEVREY 122
Query: 117 MKQILEALAFLHDHNITHLDLKPQNILLTKD-NNIKLCDFGISRVVNDVV---------- 165
M + +AL +H I H D+KP N L + L DFG+++ +D
Sbjct: 123 MLNLFKALKRIHQFGIVHRDVKPSNFLYNRRLKKYALVDFGLAQGTHDTKIELLKFVQSE 182
Query: 166 -------------------EVKEIIGTPDYVAPEVLSYEP-ISLATDMWSVGVLAYVLLS 205
+V GTP + APEVL+ P + A DMWS GV+ LLS
Sbjct: 183 AQQERCSQNKCSICLSRRQQVAPRAGTPGFRAPEVLTKCPNQTTAIDMWSAGVIFLSLLS 242
Query: 206 SHSPF 210
PF
Sbjct: 243 GRYPF 247
>pdb|2HK5|A Chain A, Hck Kinase In Complex With Lck Targetted Inhibitor Pg-
1009247
Length = 270
Score = 68.6 bits (166), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 57/202 (28%), Positives = 99/202 (49%), Gaps = 13/202 (6%)
Query: 22 GKFASVRKCTH-KITKVEYAAKFIRKRRRSMDQMQDILHEAAVLYLAQKSERIVGLHEIY 80
G+F V T+ K TKV A K ++ S++ L EA V+ Q +++V LH +
Sbjct: 26 GQFGEVWMATYNKHTKV--AVKTMKPGSMSVEA---FLAEANVMKTLQ-HDKLVKLHAVV 79
Query: 81 ETPHEMVLVLEMVPDGELQRLVDIQDGI--PEQDTRSYMKQILEALAFLHDHNITHLDLK 138
T + ++ E + G L + +G P + QI E +AF+ N H DL+
Sbjct: 80 -TKEPIYIITEFMAKGSLLDFLKSDEGSKQPLPKLIDFSAQIAEGMAFIEQRNYIHRDLR 138
Query: 139 PQNILLTKDNNIKLCDFGISRVVND-VVEVKEIIGTP-DYVAPEVLSYEPISLATDMWSV 196
NIL++ K+ DFG++RV+ D +E P + APE +++ ++ +D+WS
Sbjct: 139 AANILVSASLVCKIADFGLARVIEDNEYTAREGAKFPIKWTAPEAINFGSFTIKSDVWSF 198
Query: 197 GVLAYVLLS-SHSPFAGDNKQE 217
G+L +++ P+ G + E
Sbjct: 199 GILLMEIVTYGRIPYPGMSNPE 220
>pdb|3A99|A Chain A, Structure Of Pim-1 Kinase Crystallized In The Presence Of
P27kip1 Carboxy-Terminal Peptide
Length = 320
Score = 68.6 bits (166), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 52/184 (28%), Positives = 89/184 (48%), Gaps = 14/184 (7%)
Query: 73 IVGLHEIYETPHEMVLVLEMV-PDGELQRLVDIQDGIPEQDTRSYMKQILEALAFLHDHN 131
++ L + +E P VL+LE P +L + + + E+ RS+ Q+LEA+ H+
Sbjct: 110 VIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHCHNCG 169
Query: 132 ITHLDLKPQNILLTKDNN-IKLCDFGISRVVNDVVEVKEIIGTPDYVAPEVLSYEPI-SL 189
+ H D+K +NIL+ + +KL DFG ++ D V + GT Y PE + Y
Sbjct: 170 VLHRDIKDENILIDLNRGELKLIDFGSGALLKDTV-YTDFDGTRVYSPPEWIRYHRYHGR 228
Query: 190 ATDMWSVGVLAYVLLSSHSPFAGDNKQETFLNISQCNFSFHEDLFGHISSQAKDFIQSCL 249
+ +WS+G+L Y ++ PF D + I + F + +SS+ + I+ CL
Sbjct: 229 SAAVWSLGILLYDMVCGDIPFEHDEE------IIRGQVFFRQ----RVSSECQHLIRWCL 278
Query: 250 VTDP 253
P
Sbjct: 279 ALRP 282
>pdb|1QCF|A Chain A, Crystal Structure Of Hck In Complex With A Src Family-
Selective Tyrosine Kinase Inhibitor
pdb|2C0I|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0I|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0O|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0O|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0T|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-641359
pdb|2C0T|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-641359
Length = 454
Score = 68.6 bits (166), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 57/202 (28%), Positives = 99/202 (49%), Gaps = 13/202 (6%)
Query: 22 GKFASVRKCTH-KITKVEYAAKFIRKRRRSMDQMQDILHEAAVLYLAQKSERIVGLHEIY 80
G+F V T+ K TKV A K ++ S++ L EA V+ Q +++V LH +
Sbjct: 199 GQFGEVWMATYNKHTKV--AVKTMKPGSMSVEA---FLAEANVMKTLQH-DKLVKLHAVV 252
Query: 81 ETPHEMVLVLEMVPDGELQRLVDIQDGI--PEQDTRSYMKQILEALAFLHDHNITHLDLK 138
T + ++ E + G L + +G P + QI E +AF+ N H DL+
Sbjct: 253 -TKEPIYIITEFMAKGSLLDFLKSDEGSKQPLPKLIDFSAQIAEGMAFIEQRNYIHRDLR 311
Query: 139 PQNILLTKDNNIKLCDFGISRVVND-VVEVKEIIGTP-DYVAPEVLSYEPISLATDMWSV 196
NIL++ K+ DFG++RV+ D +E P + APE +++ ++ +D+WS
Sbjct: 312 AANILVSASLVCKIADFGLARVIEDNEYTAREGAKFPIKWTAPEAINFGSFTIKSDVWSF 371
Query: 197 GVLAYVLLS-SHSPFAGDNKQE 217
G+L +++ P+ G + E
Sbjct: 372 GILLMEIVTYGRIPYPGMSNPE 393
>pdb|4AS0|A Chain A, Cyclometalated Phthalimides As Protein Kinase Inhibitors
Length = 273
Score = 68.6 bits (166), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 52/184 (28%), Positives = 88/184 (47%), Gaps = 14/184 (7%)
Query: 73 IVGLHEIYETPHEMVLVLEMV-PDGELQRLVDIQDGIPEQDTRSYMKQILEALAFLHDHN 131
++ L + +E P VL+LE P +L + + + E+ RS+ Q+LEA+ H+
Sbjct: 71 VIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHCHNCG 130
Query: 132 ITHLDLKPQNILLTKDNN-IKLCDFGISRVVNDVVEVKEIIGTPDYVAPEVLSYEPI-SL 189
+ H D+K +NIL+ + +KL DFG ++ D V + GT Y PE + Y
Sbjct: 131 VLHRDIKDENILIDLNRGELKLIDFGSGALLKDTV-YTDFDGTRVYSPPEWIRYHRYHGR 189
Query: 190 ATDMWSVGVLAYVLLSSHSPFAGDNKQETFLNISQCNFSFHEDLFGHISSQAKDFIQSCL 249
+ +WS+G+L Y ++ PF D + I F + +SS+ + I+ CL
Sbjct: 190 SAAVWSLGILLYDMVCGDIPFEHDEE------IIGGQVFFRQ----RVSSECQHLIRWCL 239
Query: 250 VTDP 253
P
Sbjct: 240 ALRP 243
>pdb|3DTC|A Chain A, Crystal Structure Of Mixed-Lineage Kinase Mlk1 Complexed
With Compound 16
Length = 271
Score = 68.2 bits (165), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 52/173 (30%), Positives = 82/173 (47%), Gaps = 13/173 (7%)
Query: 51 MDQMQDILHEAAVLYLAQKSERIVGLHEIYETPHEMVLVLEMVPDGELQRLVDIQDGIPE 110
+ Q + + + A L+ K I+ L + + LV+E G L R++ + IP
Sbjct: 46 ISQTIENVRQEAKLFAMLKHPNIIALRGVCLKEPNLCLVMEFARGGPLNRVLSGKR-IPP 104
Query: 111 QDTRSYMKQILEALAFLHDHNIT---HLDLKPQNIL-LTKDNN-------IKLCDFGISR 159
++ QI + +LHD I H DLK NIL L K N +K+ DFG++R
Sbjct: 105 DILVNWAVQIARGMNYLHDEAIVPIIHRDLKSSNILILQKVENGDLSNKILKITDFGLAR 164
Query: 160 VVNDVVEVKEIIGTPDYVAPEVLSYEPISLATDMWSVGVLAYVLLSSHSPFAG 212
+ ++ G ++APEV+ S +D+WS GVL + LL+ PF G
Sbjct: 165 EWHRTTKMSAA-GAYAWMAPEVIRASMFSKGSDVWSYGVLLWELLTGEVPFRG 216
>pdb|3EB0|A Chain A, Crystal Structure Of Cgd4_240 From Cryptosporidium Parvum
In Complex With Indirubin E804
pdb|3EB0|C Chain C, Crystal Structure Of Cgd4_240 From Cryptosporidium Parvum
In Complex With Indirubin E804
Length = 383
Score = 68.2 bits (165), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 45/145 (31%), Positives = 74/145 (51%), Gaps = 11/145 (7%)
Query: 88 LVLEMVPD---GELQRLVDIQDGIPEQDTRSYMKQILEALAFLHDHNITHLDLKPQNILL 144
+++E VPD L+ + IP Y+ Q+ A+ F+H I H D+KPQN+L+
Sbjct: 115 VIMEYVPDTLHKVLKSFIRSGRSIPMNLISIYIYQLFRAVGFIHSLGICHRDIKPQNLLV 174
Query: 145 -TKDNNIKLCDFGISRVVNDVVEVKEIIGTPDYVAPEVL----SYEPISLATDMWSVGVL 199
+KDN +KLCDFG ++ + I + Y APE++ Y P + D+WS+G +
Sbjct: 175 NSKDNTLKLCDFGSAKKLIPSEPSVAXICSRFYRAPELMLGATEYTP---SIDLWSIGCV 231
Query: 200 AYVLLSSHSPFAGDNKQETFLNISQ 224
L+ F+G+ + + I Q
Sbjct: 232 FGELILGKPLFSGETSIDQLVRIIQ 256
>pdb|1YHS|A Chain A, Crystal Structure Of Pim-1 Bound To Staurosporine
pdb|1YI3|A Chain A, Crystal Structure Of Pim-1 Bound To Ly294002
pdb|1YI4|A Chain A, Structure Of Pim-1 Bound To Adenosine
Length = 273
Score = 68.2 bits (165), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 51/184 (27%), Positives = 88/184 (47%), Gaps = 14/184 (7%)
Query: 73 IVGLHEIYETPHEMVLVLEMV-PDGELQRLVDIQDGIPEQDTRSYMKQILEALAFLHDHN 131
++ L + +E P VL+LE P +L + + + E+ RS+ Q+LEA+ H+
Sbjct: 71 VIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHCHNXG 130
Query: 132 ITHLDLKPQNILLTKDNN-IKLCDFGISRVVNDVVEVKEIIGTPDYVAPEVLSYEPI-SL 189
+ H D+K +NIL+ + +KL DFG ++ D V + GT Y PE + Y
Sbjct: 131 VLHRDIKDENILIDLNRGELKLIDFGSGALLKDTV-YTDFDGTRVYSPPEWIRYHRYHGR 189
Query: 190 ATDMWSVGVLAYVLLSSHSPFAGDNKQETFLNISQCNFSFHEDLFGHISSQAKDFIQSCL 249
+ +WS+G+L Y ++ PF D + I + F + +S + + I+ CL
Sbjct: 190 SAAVWSLGILLYDMVCGDIPFEHDEE------IIRGQVFFRQ----RVSXECQHLIRWCL 239
Query: 250 VTDP 253
P
Sbjct: 240 ALRP 243
>pdb|1ZY4|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY4|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY5|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp.
pdb|1ZY5|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp
Length = 303
Score = 67.8 bits (164), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 59/221 (26%), Positives = 106/221 (47%), Gaps = 35/221 (15%)
Query: 20 SRGKFASVRKCTHKITKVEYAAKFIRKRRRSMDQMQDIL----------HEAAVLYLAQK 69
+G F V K + + YA I+K R + +++ IL H+ V Y A
Sbjct: 15 GQGAFGQVVKARNALDSRYYA---IKKIRHTEEKLSTILSEVMLLASLNHQYVVRYYAAW 71
Query: 70 SERIVGLHEIYETPHEMVLVLEM--VPDGELQRLVDIQDGIPEQDTRSYM-KQILEALAF 126
ER + + + L ++M +G L L+ ++ ++D + +QILEAL++
Sbjct: 72 LERRNFVKPMTAVKKKSTLFIQMEYCENGTLYDLIHSENLNQQRDEYWRLFRQILEALSY 131
Query: 127 LHDHNITHLDLKPQNILLTKDNNIKLCDFGISRVVNDVVEVKEI---------------I 171
+H I H DLKP NI + + N+K+ DFG+++ V+ +++ ++ I
Sbjct: 132 IHSQGIIHRDLKPMNIFIDESRNVKIGDFGLAKNVHRSLDILKLDSQNLPGSSDNLTSAI 191
Query: 172 GTPDYVAPEVLSYEP-ISLATDMWSVGVLAYVLLSSHSPFA 211
GT YVA EVL + DM+S+G++ + ++ PF+
Sbjct: 192 GTAMYVATEVLDGTGHYNEKIDMYSLGIIFFEMI---YPFS 229
>pdb|2BIL|B Chain B, The Human Protein Kinase Pim1 In Complex With Its
Consensus Peptide Pimtide
pdb|2BZJ|A Chain A, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru3
pdb|2BZK|B Chain B, Crystal Structure Of The Human Pim1 In Complex With Amppnp
And Pimtide
pdb|2C3I|B Chain B, Crystal Structure Of Human Pim1 In Complex With
Imidazopyridazin I
pdb|2BZH|B Chain B, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru1
pdb|2OI4|X Chain X, Crystal Structure Of Human Pim1 In Complex With
Fluorinated Ruthenium Pyridocarbazole
pdb|3BWF|A Chain A, Crystal Structure Of The Human Pim1 In Complex With An
Osmium Compound
Length = 313
Score = 67.8 bits (164), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 52/184 (28%), Positives = 88/184 (47%), Gaps = 14/184 (7%)
Query: 73 IVGLHEIYETPHEMVLVLEMV-PDGELQRLVDIQDGIPEQDTRSYMKQILEALAFLHDHN 131
++ L + +E P VL+LE P +L + + + E+ RS+ Q+LEA+ H+
Sbjct: 103 VIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHCHNCG 162
Query: 132 ITHLDLKPQNILLTKDNN-IKLCDFGISRVVNDVVEVKEIIGTPDYVAPEVLSYEPI-SL 189
+ H D+K +NIL+ + +KL DFG ++ D V + GT Y PE + Y
Sbjct: 163 VLHRDIKDENILIDLNRGELKLIDFGSGALLKDTV-YTDFDGTRVYSPPEWIRYHRYHGR 221
Query: 190 ATDMWSVGVLAYVLLSSHSPFAGDNKQETFLNISQCNFSFHEDLFGHISSQAKDFIQSCL 249
+ +WS+G+L Y ++ PF D + I F + +SS+ + I+ CL
Sbjct: 222 SAAVWSLGILLYDMVCGDIPFEHDEE------IIGGQVFFRQ----RVSSECQHLIRWCL 271
Query: 250 VTDP 253
P
Sbjct: 272 ALRP 275
>pdb|4E6D|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6D|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6Q|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
pdb|4E6Q|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
Length = 298
Score = 67.8 bits (164), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 47/146 (32%), Positives = 78/146 (53%), Gaps = 15/146 (10%)
Query: 86 MVLVLEMVPDGELQR-LVDIQDGIPEQDTRSYMKQILEALAFLHDHNITHLDLKPQNILL 144
+ L++E +P G L+ L ++ I Y QI + + +L H DL +NIL+
Sbjct: 91 LKLIMEFLPYGSLREYLQKHKERIDHIKLLQYTSQICKGMEYLGTKRYIHRDLATRNILV 150
Query: 145 TKDNNIKLCDFGISRVV---NDVVEVKEIIGTPD-YVAPEVLSYEPISLATDMWSVGVLA 200
+N +K+ DFG+++V+ + +VKE +P + APE L+ S+A+D+WS GV+
Sbjct: 151 ENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVL 210
Query: 201 YVLLS----SHSPFA------GDNKQ 216
Y L + S SP A G++KQ
Sbjct: 211 YELFTYIEKSKSPPAEFMRMIGNDKQ 236
>pdb|3JPV|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Pyrrolo[2,3- A]carbazole Ligand
pdb|3QF9|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Furan- Thiazolidinedione Ligand
pdb|4GW8|A Chain A, Human Proto-Oncogene Serine Threonine Kinase (Pim1) In
Complex With A Consensus Peptide And Leucettine L41
Length = 313
Score = 67.8 bits (164), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 52/184 (28%), Positives = 88/184 (47%), Gaps = 14/184 (7%)
Query: 73 IVGLHEIYETPHEMVLVLEMV-PDGELQRLVDIQDGIPEQDTRSYMKQILEALAFLHDHN 131
++ L + +E P VL+LE P +L + + + E+ RS+ Q+LEA+ H+
Sbjct: 104 VIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHCHNCG 163
Query: 132 ITHLDLKPQNILLTKDNN-IKLCDFGISRVVNDVVEVKEIIGTPDYVAPEVLSYEPI-SL 189
+ H D+K +NIL+ + +KL DFG ++ D V + GT Y PE + Y
Sbjct: 164 VLHRDIKDENILIDLNRGELKLIDFGSGALLKDTV-YTDFDGTRVYSPPEWIRYHRYHGR 222
Query: 190 ATDMWSVGVLAYVLLSSHSPFAGDNKQETFLNISQCNFSFHEDLFGHISSQAKDFIQSCL 249
+ +WS+G+L Y ++ PF D + I F + +SS+ + I+ CL
Sbjct: 223 SAAVWSLGILLYDMVCGDIPFEHDEE------IIGGQVFFRQ----RVSSECQHLIRWCL 272
Query: 250 VTDP 253
P
Sbjct: 273 ALRP 276
>pdb|3CXW|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Beta Carboline Ligand I
pdb|3CY2|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Beta Carboline Ligand Ii
Length = 314
Score = 67.8 bits (164), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 52/184 (28%), Positives = 88/184 (47%), Gaps = 14/184 (7%)
Query: 73 IVGLHEIYETPHEMVLVLEMV-PDGELQRLVDIQDGIPEQDTRSYMKQILEALAFLHDHN 131
++ L + +E P VL+LE P +L + + + E+ RS+ Q+LEA+ H+
Sbjct: 104 VIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHCHNCG 163
Query: 132 ITHLDLKPQNILLTKDNN-IKLCDFGISRVVNDVVEVKEIIGTPDYVAPEVLSYEPI-SL 189
+ H D+K +NIL+ + +KL DFG ++ D V + GT Y PE + Y
Sbjct: 164 VLHRDIKDENILIDLNRGELKLIDFGSGALLKDTV-YTDFDGTRVYSPPEWIRYHRYHGR 222
Query: 190 ATDMWSVGVLAYVLLSSHSPFAGDNKQETFLNISQCNFSFHEDLFGHISSQAKDFIQSCL 249
+ +WS+G+L Y ++ PF D + I F + +SS+ + I+ CL
Sbjct: 223 SAAVWSLGILLYDMVCGDIPFEHDEE------IIGGQVFFRQ----RVSSECQHLIRWCL 272
Query: 250 VTDP 253
P
Sbjct: 273 ALRP 276
>pdb|2J2I|B Chain B, Crystal Structure Of The Humab Pim1 In Complex With
Ly333531
Length = 312
Score = 67.8 bits (164), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 52/184 (28%), Positives = 88/184 (47%), Gaps = 14/184 (7%)
Query: 73 IVGLHEIYETPHEMVLVLEMV-PDGELQRLVDIQDGIPEQDTRSYMKQILEALAFLHDHN 131
++ L + +E P VL+LE P +L + + + E+ RS+ Q+LEA+ H+
Sbjct: 103 VIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHCHNCG 162
Query: 132 ITHLDLKPQNILLTKDNN-IKLCDFGISRVVNDVVEVKEIIGTPDYVAPEVLSYEPI-SL 189
+ H D+K +NIL+ + +KL DFG ++ D V + GT Y PE + Y
Sbjct: 163 VLHRDIKDENILIDLNRGELKLIDFGSGALLKDTV-YTDFDGTRVYSPPEWIRYHRYHGR 221
Query: 190 ATDMWSVGVLAYVLLSSHSPFAGDNKQETFLNISQCNFSFHEDLFGHISSQAKDFIQSCL 249
+ +WS+G+L Y ++ PF D + I F + +SS+ + I+ CL
Sbjct: 222 SAAVWSLGILLYDMVCGDIPFEHDEE------IIGGQVFFRQ----RVSSECQHLIRWCL 271
Query: 250 VTDP 253
P
Sbjct: 272 ALRP 275
>pdb|3MIY|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MIY|B Chain B, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MJ1|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Ro5191614
pdb|3MJ2|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Bms-509744
Length = 266
Score = 67.8 bits (164), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 58/207 (28%), Positives = 100/207 (48%), Gaps = 11/207 (5%)
Query: 22 GKFASVRKCTHKITKVEYAAKFIRKRRRSMDQMQDILHEAAVLYLAQKSERIVGLHEIYE 81
G+F V + + K + A K IR+ S +D + EA V+ + ++V L+ +
Sbjct: 18 GQFGLVH-LGYWLNKDKVAIKTIREGAMSE---EDFIEEAEVM-MKLSHPKLVQLYGVCL 72
Query: 82 TPHEMVLVLEMVPDGELQRLVDIQDGIPEQDTRSYM-KQILEALAFLHDHNITHLDLKPQ 140
+ LV E + G L + Q G+ +T M + E +A+L + ++ H DL +
Sbjct: 73 EQAPICLVFEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLEEASVIHRDLAAR 132
Query: 141 NILLTKDNNIKLCDFGISRVVNDVVEVKEIIGTP---DYVAPEVLSYEPISLATDMWSVG 197
N L+ ++ IK+ DFG++R V D + GT + +PEV S+ S +D+WS G
Sbjct: 133 NCLVGENQVIKVSDFGMTRFVLD-DQYTSSTGTKFPVKWASPEVFSFSRYSSKSDVWSFG 191
Query: 198 VLAYVLLSSHS-PFAGDNKQETFLNIS 223
VL + + S P+ + E +IS
Sbjct: 192 VLMWEVFSEGKIPYENRSNSEVVEDIS 218
>pdb|3LXN|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXP|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 318
Score = 67.8 bits (164), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 46/130 (35%), Positives = 69/130 (53%), Gaps = 9/130 (6%)
Query: 88 LVLEMVPDGELQRLVDIQDGIPEQDTRSYMKQILEALAFLHDHNITHLDLKPQNILLTKD 147
LV+E VP G L+ + + I + +QI E +A+LH + H DL +N+LL D
Sbjct: 112 LVMEYVPLGSLRDYLP-RHSIGLAQLLLFAQQICEGMAYLHAQHYIHRDLAARNVLLDND 170
Query: 148 NNIKLCDFGISRVV---NDVVEVKEIIGTPD-YVAPEVLSYEPISLATDMWSVGVLAYVL 203
+K+ DFG+++ V ++ V+E +P + APE L A+D+WS GV Y L
Sbjct: 171 RLVKIGDFGLAKAVPEGHEXYRVREDGDSPVFWYAPECLKEYKFYYASDVWSFGVTLYEL 230
Query: 204 L----SSHSP 209
L SS SP
Sbjct: 231 LTHCDSSQSP 240
>pdb|1QPD|A Chain A, Structural Analysis Of The Lymphocyte-specific Kinase Lck
In Complex With Non-selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 67.0 bits (162), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 42/159 (26%), Positives = 79/159 (49%), Gaps = 6/159 (3%)
Query: 71 ERIVGLHEIYETPHEMVLVLEMVPDGELQRLVDIQDGIPEQDTR--SYMKQILEALAFLH 128
+R+V L+ + T + ++ E + +G L + GI + QI E +AF+
Sbjct: 68 QRLVRLYAVV-TQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIE 126
Query: 129 DHNITHLDLKPQNILLTKDNNIKLCDFGISRVVNDV-VEVKEIIGTP-DYVAPEVLSYEP 186
+ N H DL+ NIL++ + K+ DFG++R++ D +E P + APE ++Y
Sbjct: 127 ERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDAEXTAREGAKFPIKWTAPEAINYGT 186
Query: 187 ISLATDMWSVGV-LAYVLLSSHSPFAGDNKQETFLNISQ 224
++ +D+WS G+ L ++ P+ G E N+ +
Sbjct: 187 FTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLER 225
>pdb|4A7C|A Chain A, Crystal Structure Of Pim1 Kinase With Etp46546
Length = 308
Score = 67.0 bits (162), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 51/184 (27%), Positives = 88/184 (47%), Gaps = 14/184 (7%)
Query: 73 IVGLHEIYETPHEMVLVLEMV-PDGELQRLVDIQDGIPEQDTRSYMKQILEALAFLHDHN 131
++ L + +E P VL+LE P +L + + + E+ RS+ Q+LEA+ H+
Sbjct: 98 VIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHCHNCG 157
Query: 132 ITHLDLKPQNILLTKDNN-IKLCDFGISRVVNDVVEVKEIIGTPDYVAPEVLSYEPI-SL 189
+ H D+K +NIL+ + +KL DFG ++ D V + GT Y PE + Y
Sbjct: 158 VLHRDIKDENILIDLNRGELKLIDFGSGALLKDTV-YTDFDGTRVYSPPEWIRYHRYHGR 216
Query: 190 ATDMWSVGVLAYVLLSSHSPFAGDNKQETFLNISQCNFSFHEDLFGHISSQAKDFIQSCL 249
+ +WS+G+L Y ++ PF D + I + F + +S + + I+ CL
Sbjct: 217 SAAVWSLGILLYDMVCGDIPFEHDEE------IIRGQVFFRQ----RVSXECQHLIRWCL 266
Query: 250 VTDP 253
P
Sbjct: 267 ALRP 270
>pdb|3UGC|A Chain A, Structural Basis Of Jak2 Inhibition By The Type Ii
Inhibtor Nvp-Bbt594
Length = 295
Score = 67.0 bits (162), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 59/226 (26%), Positives = 107/226 (47%), Gaps = 40/226 (17%)
Query: 20 SRGKFASVRKCTH-----------KITKVEYAAK-FIRKRRRSMDQMQDILHEAAVLY-- 65
+G F SV C + + K++++ + +R R ++ ++ + H+ V Y
Sbjct: 19 GKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKG 78
Query: 66 LAQKSERIVGLHEIYETPHEMVLVLEMVPDGELQ-RLVDIQDGIPEQDTRSYMKQILEAL 124
+ + R + L++E +P G L+ L ++ I Y QI + +
Sbjct: 79 VCYSAGR-----------RNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGM 127
Query: 125 AFLHDHNITHLDLKPQNILLTKDNNIKLCDFGISRVV---NDVVEVKEIIGTPD-YVAPE 180
+L H DL +NIL+ +N +K+ DFG+++V+ + +VKE +P + APE
Sbjct: 128 EYLGTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEFFKVKEPGESPIFWYAPE 187
Query: 181 VLSYEPISLATDMWSVGVLAYVLLS----SHSPFA------GDNKQ 216
L+ S+A+D+WS GV+ Y L + S SP A G++KQ
Sbjct: 188 SLTESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQ 233
>pdb|2XIY|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-2 From
Crystallographic Fragment Screen
pdb|2XIZ|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-3 From
Crystallographic Fragment Screen
pdb|2XJ1|A Chain A, Protein Kinase Pim-1 In Complex With Small Molecule
Inibitor
pdb|2XJ2|A Chain A, Protein Kinase Pim-1 In Complex With Small Molecule
Inhibitor
Length = 301
Score = 67.0 bits (162), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 51/184 (27%), Positives = 88/184 (47%), Gaps = 14/184 (7%)
Query: 73 IVGLHEIYETPHEMVLVLEMV-PDGELQRLVDIQDGIPEQDTRSYMKQILEALAFLHDHN 131
++ L + +E P VL+LE P +L + + + E+ RS+ Q+LEA+ H+
Sbjct: 91 VIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHCHNCG 150
Query: 132 ITHLDLKPQNILLTKDNN-IKLCDFGISRVVNDVVEVKEIIGTPDYVAPEVLSYEPI-SL 189
+ H D+K +NIL+ + +KL DFG ++ D V + GT Y PE + Y
Sbjct: 151 VLHRDIKDENILIDLNRGELKLIDFGSGALLKDTV-YTDFDGTRVYSPPEWIRYHRYHGR 209
Query: 190 ATDMWSVGVLAYVLLSSHSPFAGDNKQETFLNISQCNFSFHEDLFGHISSQAKDFIQSCL 249
+ +WS+G+L Y ++ PF D + I + F + +S + + I+ CL
Sbjct: 210 SAAVWSLGILLYDMVCGDIPFEHDEE------IIRGQVFFRQ----RVSXECQHLIRWCL 259
Query: 250 VTDP 253
P
Sbjct: 260 ALRP 263
>pdb|3F2A|A Chain A, Crystal Structure Of Human Pim-1 In Complex With Dappa
Length = 300
Score = 67.0 bits (162), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 51/184 (27%), Positives = 88/184 (47%), Gaps = 14/184 (7%)
Query: 73 IVGLHEIYETPHEMVLVLEMV-PDGELQRLVDIQDGIPEQDTRSYMKQILEALAFLHDHN 131
++ L + +E P VL+LE P +L + + + E+ RS+ Q+LEA+ H+
Sbjct: 90 VIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHCHNCG 149
Query: 132 ITHLDLKPQNILLTKDNN-IKLCDFGISRVVNDVVEVKEIIGTPDYVAPEVLSYEPI-SL 189
+ H D+K +NIL+ + +KL DFG ++ D V + GT Y PE + Y
Sbjct: 150 VLHRDIKDENILIDLNRGELKLIDFGSGALLKDTV-YTDFDGTRVYSPPEWIRYHRYHGR 208
Query: 190 ATDMWSVGVLAYVLLSSHSPFAGDNKQETFLNISQCNFSFHEDLFGHISSQAKDFIQSCL 249
+ +WS+G+L Y ++ PF D + I + F + +S + + I+ CL
Sbjct: 209 SAAVWSLGILLYDMVCGDIPFEHDEE------IIRGQVFFRQ----RVSXECQHLIRWCL 258
Query: 250 VTDP 253
P
Sbjct: 259 ALRP 262
>pdb|3QGW|A Chain A, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGW|B Chain B, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGY|A Chain A, Crystal Structure Of Itk Inhibitor Complex
pdb|3QGY|B Chain B, Crystal Structure Of Itk Inhibitor Complex
Length = 286
Score = 67.0 bits (162), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 58/207 (28%), Positives = 99/207 (47%), Gaps = 11/207 (5%)
Query: 22 GKFASVRKCTHKITKVEYAAKFIRKRRRSMDQMQDILHEAAVLYLAQKSERIVGLHEIYE 81
G+F V + + K + A K I++ S D D + EA V+ + ++V L+ +
Sbjct: 38 GQFGLVH-LGYWLNKDKVAIKTIKEGSMSED---DFIEEAEVM-MKLSHPKLVQLYGVCL 92
Query: 82 TPHEMVLVLEMVPDGELQRLVDIQDGIPEQDTRSYM-KQILEALAFLHDHNITHLDLKPQ 140
+ LV E + G L + Q G+ +T M + E +A+L + + H DL +
Sbjct: 93 EQAPICLVFEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLEEACVIHRDLAAR 152
Query: 141 NILLTKDNNIKLCDFGISRVVNDVVEVKEIIGTP---DYVAPEVLSYEPISLATDMWSVG 197
N L+ ++ IK+ DFG++R V D + GT + +PEV S+ S +D+WS G
Sbjct: 153 NCLVGENQVIKVSDFGMTRFVLD-DQYTSSTGTKFPVKWASPEVFSFSRYSSKSDVWSFG 211
Query: 198 VLAYVLLSSHS-PFAGDNKQETFLNIS 223
VL + + S P+ + E +IS
Sbjct: 212 VLMWEVFSEGKIPYENRSNSEVVEDIS 238
>pdb|2XIX|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-1 From
Crystallographic Fragment Screen
Length = 301
Score = 67.0 bits (162), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 51/184 (27%), Positives = 88/184 (47%), Gaps = 14/184 (7%)
Query: 73 IVGLHEIYETPHEMVLVLEMV-PDGELQRLVDIQDGIPEQDTRSYMKQILEALAFLHDHN 131
++ L + +E P VL+LE P +L + + + E+ RS+ Q+LEA+ H+
Sbjct: 91 VIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHCHNCG 150
Query: 132 ITHLDLKPQNILLTKDNN-IKLCDFGISRVVNDVVEVKEIIGTPDYVAPEVLSYEPI-SL 189
+ H D+K +NIL+ + +KL DFG ++ D V + GT Y PE + Y
Sbjct: 151 VLHRDIKDENILIDLNRGELKLIDFGSGALLKDTV-YTDFDGTRVYSPPEWIRYHRYHGR 209
Query: 190 ATDMWSVGVLAYVLLSSHSPFAGDNKQETFLNISQCNFSFHEDLFGHISSQAKDFIQSCL 249
+ +WS+G+L Y ++ PF D + I + F + +S + + I+ CL
Sbjct: 210 SAAVWSLGILLYDMVCGDIPFEHDEE------IIRGQVFFRQ----RVSXECQHLIRWCL 259
Query: 250 VTDP 253
P
Sbjct: 260 ALRP 263
>pdb|3DCV|A Chain A, Crystal Structure Of Human Pim1 Kinase Complexed With
4-(4-
Hydroxy-3-Methyl-Phenyl)-6-Phenylpyrimidin-2(1h)-One
pdb|3T9I|A Chain A, Pim1 Complexed With A Novel 3,6-Disubstituted Indole At
2.6 Ang Resolution
Length = 328
Score = 67.0 bits (162), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 51/184 (27%), Positives = 88/184 (47%), Gaps = 14/184 (7%)
Query: 73 IVGLHEIYETPHEMVLVLEMV-PDGELQRLVDIQDGIPEQDTRSYMKQILEALAFLHDHN 131
++ L + +E P VL+LE P +L + + + E+ RS+ Q+LEA+ H+
Sbjct: 118 VIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHCHNCG 177
Query: 132 ITHLDLKPQNILLTKDNN-IKLCDFGISRVVNDVVEVKEIIGTPDYVAPEVLSYEPI-SL 189
+ H D+K +NIL+ + +KL DFG ++ D V + GT Y PE + Y
Sbjct: 178 VLHRDIKDENILIDLNRGELKLIDFGSGALLKDTV-YTDFDGTRVYSPPEWIRYHRYHGR 236
Query: 190 ATDMWSVGVLAYVLLSSHSPFAGDNKQETFLNISQCNFSFHEDLFGHISSQAKDFIQSCL 249
+ +WS+G+L Y ++ PF D + I + F + +S + + I+ CL
Sbjct: 237 SAAVWSLGILLYDMVCGDIPFEHDEE------IIRGQVFFRQ----RVSXECQHLIRWCL 286
Query: 250 VTDP 253
P
Sbjct: 287 ALRP 290
>pdb|2OBJ|A Chain A, Crystal Structure Of Human Pim-1 Kinase In Complex With
Inhibitor
pdb|3BGP|A Chain A, Human Pim-1 Complexed With A Benzoisoxazole Inhibitor Vx1
pdb|3BGQ|A Chain A, Human Pim-1 Kinase In Complex With An Triazolo Pyridazine
Inhibitor Vx2
pdb|3BGZ|A Chain A, Human Pim-1 Kinase In Complex With Diphenyl Indole
Inhibitor Vx3
Length = 333
Score = 67.0 bits (162), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 51/184 (27%), Positives = 88/184 (47%), Gaps = 14/184 (7%)
Query: 73 IVGLHEIYETPHEMVLVLEMV-PDGELQRLVDIQDGIPEQDTRSYMKQILEALAFLHDHN 131
++ L + +E P VL+LE P +L + + + E+ RS+ Q+LEA+ H+
Sbjct: 123 VIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHCHNCG 182
Query: 132 ITHLDLKPQNILLTKDNN-IKLCDFGISRVVNDVVEVKEIIGTPDYVAPEVLSYEPI-SL 189
+ H D+K +NIL+ + +KL DFG ++ D V + GT Y PE + Y
Sbjct: 183 VLHRDIKDENILIDLNRGELKLIDFGSGALLKDTV-YTDFDGTRVYSPPEWIRYHRYHGR 241
Query: 190 ATDMWSVGVLAYVLLSSHSPFAGDNKQETFLNISQCNFSFHEDLFGHISSQAKDFIQSCL 249
+ +WS+G+L Y ++ PF D + I + F + +S + + I+ CL
Sbjct: 242 SAAVWSLGILLYDMVCGDIPFEHDEE------IIRGQVFFRQ----RVSXECQHLIRWCL 291
Query: 250 VTDP 253
P
Sbjct: 292 ALRP 295
>pdb|4EXU|A Chain A, Mapk13, Inactive Form
pdb|4EYJ|A Chain A, Mapk13 Complex With Inhibitor
pdb|4EYM|A Chain A, Mapk13 Complex With Inhibitor
Length = 371
Score = 67.0 bits (162), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 49/186 (26%), Positives = 97/186 (52%), Gaps = 15/186 (8%)
Query: 71 ERIVGLHEIYETP-------HEMVLVLEMVPDGELQRLVDIQDGIPEQDTRSYMKQILEA 123
E ++GL +++ TP ++ LV+ + +LQ+++ ++ E+ + + Q+L+
Sbjct: 101 ENVIGLLDVF-TPASSLRNFYDFYLVMPFM-QTDLQKIMGME--FSEEKIQYLVYQMLKG 156
Query: 124 LAFLHDHNITHLDLKPQNILLTKDNNIKLCDFGISRVVNDVVEVKEIIGTPDYVAPEV-L 182
L ++H + H DLKP N+ + +D +K+ DFG++R + E+ + T Y APEV L
Sbjct: 157 LKYIHSAGVVHRDLKPGNLAVNEDCELKILDFGLARHAD--AEMTGYVVTRWYRAPEVIL 214
Query: 183 SYEPISLATDMWSVGVLAYVLLSSHSPFAGDNKQETFLNISQCNFSFHEDLFGHISSQ-A 241
S+ + D+WSVG + +L+ + F G + + I + + ++ + A
Sbjct: 215 SWMHYNQTVDIWSVGCIMAEMLTGKTLFKGKDYLDQLTQILKVTGVPGTEFVQKLNDKAA 274
Query: 242 KDFIQS 247
K +IQS
Sbjct: 275 KSYIQS 280
>pdb|3A4O|X Chain X, Lyn Kinase Domain
Length = 286
Score = 67.0 bits (162), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 44/178 (24%), Positives = 89/178 (50%), Gaps = 10/178 (5%)
Query: 54 MQDILHEAAVLYLAQKSERIVGLHEIYETPHEMVLVLEMVPDGELQRLVDIQDG----IP 109
+Q L EA ++ Q +++V L+ + + ++ E + G L + +G +P
Sbjct: 52 VQAFLEEANLMKTLQ-HDKLVRLYAVVTREEPIYIITEYMAKGSLLDFLKSDEGGKVLLP 110
Query: 110 EQDTRSYMKQILEALAFLHDHNITHLDLKPQNILLTKDNNIKLCDFGISRVVND-VVEVK 168
+ + QI E +A++ N H DL+ N+L+++ K+ DFG++RV+ D +
Sbjct: 111 K--LIDFSAQIAEGMAYIERKNYIHRDLRAANVLVSESLMCKIADFGLARVIEDNEYTAR 168
Query: 169 EIIGTP-DYVAPEVLSYEPISLATDMWSVGVLAYVLLS-SHSPFAGDNKQETFLNISQ 224
E P + APE +++ ++ +D+WS G+L Y +++ P+ G + +SQ
Sbjct: 169 EGAKFPIKWTAPEAINFGCFTIKSDVWSFGILLYEIVTYGKIPYPGRTNADVMTALSQ 226
>pdb|3NYX|A Chain A, Non-Phosphorylated Tyk2 Jh1 Domain With
Quinoline-Thiadiazole- Thiophene Inhibitor
Length = 302
Score = 66.6 bits (161), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 45/132 (34%), Positives = 70/132 (53%), Gaps = 9/132 (6%)
Query: 86 MVLVLEMVPDGELQRLVDIQDGIPEQDTRSYMKQILEALAFLHDHNITHLDLKPQNILLT 145
+ LV+E VP G L+ + + I + +QI E +A+LH + H +L +N+LL
Sbjct: 93 LQLVMEYVPLGSLRDYLP-RHSIGLAQLLLFAQQICEGMAYLHSQHYIHRNLAARNVLLD 151
Query: 146 KDNNIKLCDFGISRVV---NDVVEVKEIIGTPD-YVAPEVLSYEPISLATDMWSVGVLAY 201
D +K+ DFG+++ V ++ V+E +P + APE L A+D+WS GV Y
Sbjct: 152 NDRLVKIGDFGLAKAVPEGHEYYRVREDGDSPVFWYAPECLKEYKFYYASDVWSFGVTLY 211
Query: 202 VLL----SSHSP 209
LL SS SP
Sbjct: 212 ELLTHCDSSQSP 223
>pdb|3HNG|A Chain A, Crystal Structure Of Vegfr1 In Complex With
N-(4-chlorophenyl)-2-
((pyridin-4-ylmethyl)amino)benzamide
Length = 360
Score = 66.6 bits (161), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 42/128 (32%), Positives = 63/128 (49%), Gaps = 22/128 (17%)
Query: 105 QDGIPEQDTRSYMKQILEALAFLHDHNITHLDLKPQNILLTKDNNIKLCDFGISRVVNDV 164
++ I +D SY Q+ + FL H DL +NILL+++N +K+CDFG++R
Sbjct: 193 KEPITMEDLISYSFQVARGMEFLSSRKCIHRDLAARNILLSENNVVKICDFGLAR----- 247
Query: 165 VEVKEIIGTPDYV------------APEVLSYEPISLATDMWSVGVLAYVLLS-SHSPFA 211
+I PDYV APE + + S +D+WS GVL + + S SP+
Sbjct: 248 ----DIYKNPDYVRKGDTRLPLKWMAPESIFDKIYSTKSDVWSYGVLLWEIFSLGGSPYP 303
Query: 212 GDNKQETF 219
G E F
Sbjct: 304 GVQMDEDF 311
>pdb|3COI|A Chain A, Crystal Structure Of P38delta Kinase
Length = 353
Score = 66.6 bits (161), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 49/186 (26%), Positives = 97/186 (52%), Gaps = 15/186 (8%)
Query: 71 ERIVGLHEIYETP-------HEMVLVLEMVPDGELQRLVDIQDGIPEQDTRSYMKQILEA 123
E ++GL +++ TP ++ LV+ + +LQ+++ ++ E+ + + Q+L+
Sbjct: 83 ENVIGLLDVF-TPASSLRNFYDFYLVMPFM-QTDLQKIMGLK--FSEEKIQYLVYQMLKG 138
Query: 124 LAFLHDHNITHLDLKPQNILLTKDNNIKLCDFGISRVVNDVVEVKEIIGTPDYVAPEV-L 182
L ++H + H DLKP N+ + +D +K+ DFG++R + E+ + T Y APEV L
Sbjct: 139 LKYIHSAGVVHRDLKPGNLAVNEDCELKILDFGLARHAD--AEMTGYVVTRWYRAPEVIL 196
Query: 183 SYEPISLATDMWSVGVLAYVLLSSHSPFAGDNKQETFLNISQCNFSFHEDLFGHISSQ-A 241
S+ + D+WSVG + +L+ + F G + + I + + ++ + A
Sbjct: 197 SWMHYNQTVDIWSVGCIMAEMLTGKTLFKGKDYLDQLTQILKVTGVPGTEFVQKLNDKAA 256
Query: 242 KDFIQS 247
K +IQS
Sbjct: 257 KSYIQS 262
>pdb|3FPQ|A Chain A, Crystal Structure Of The Kinase Domain Of Wnk1
pdb|3FPQ|B Chain B, Crystal Structure Of The Kinase Domain Of Wnk1
Length = 290
Score = 66.6 bits (161), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 57/199 (28%), Positives = 93/199 (46%), Gaps = 10/199 (5%)
Query: 20 SRGKFASVRKCTHKITKVEYAAKFIRKRRRSMDQMQDILHEAAVLYLAQKSERIVGLHEI 79
RG F +V K T VE A ++ R+ + + Q EA L Q IV ++
Sbjct: 35 GRGSFKTVYKGLDTETTVEVAWCELQDRKLTKSERQRFKEEAEXLKGLQHP-NIVRFYDS 93
Query: 80 YETPHE----MVLVLEMVPDGELQRLVDIQDGIPEQDTRSYMKQILEALAFLHDHN--IT 133
+E+ + +VLV E+ G L+ + + RS+ +QIL+ L FLH I
Sbjct: 94 WESTVKGKKCIVLVTELXTSGTLKTYLKRFKVXKIKVLRSWCRQILKGLQFLHTRTPPII 153
Query: 134 HLDLKPQNILLTK-DNNIKLCDFGISRVVNDVVEVKEIIGTPDYVAPEVLSYEPISLATD 192
H DLK NI +T ++K+ D G++ + K +IGTP++ APE E + D
Sbjct: 154 HRDLKCDNIFITGPTGSVKIGDLGLA-TLKRASFAKAVIGTPEFXAPEXYE-EKYDESVD 211
Query: 193 MWSVGVLAYVLLSSHSPFA 211
+++ G +S P++
Sbjct: 212 VYAFGXCXLEXATSEYPYS 230
>pdb|4E4M|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|D Chain D, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|E Chain E, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4F08|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F08|B Chain B, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F09|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
Length = 302
Score = 66.6 bits (161), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 59/226 (26%), Positives = 107/226 (47%), Gaps = 40/226 (17%)
Query: 20 SRGKFASVRKCTH-----------KITKVEYAAK-FIRKRRRSMDQMQDILHEAAVLY-- 65
+G F SV C + + K++++ + +R R ++ ++ + H+ V Y
Sbjct: 26 GKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKG 85
Query: 66 LAQKSERIVGLHEIYETPHEMVLVLEMVPDGELQR-LVDIQDGIPEQDTRSYMKQILEAL 124
+ + R + L++E +P G L+ L ++ I Y QI + +
Sbjct: 86 VCYSAGR-----------RNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGM 134
Query: 125 AFLHDHNITHLDLKPQNILLTKDNNIKLCDFGISRVV---NDVVEVKEIIGTPD-YVAPE 180
+L H DL +NIL+ +N +K+ DFG+++V+ + +VKE +P + APE
Sbjct: 135 EYLGTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPE 194
Query: 181 VLSYEPISLATDMWSVGVLAYVLLS----SHSPFA------GDNKQ 216
L+ S+A+D+WS GV+ Y L + S SP A G++KQ
Sbjct: 195 SLTESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQ 240
>pdb|2W1I|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1I|B Chain B, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 326
Score = 66.6 bits (161), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 59/226 (26%), Positives = 107/226 (47%), Gaps = 40/226 (17%)
Query: 20 SRGKFASVRKCTH-----------KITKVEYAAK-FIRKRRRSMDQMQDILHEAAVLY-- 65
+G F SV C + + K++++ + +R R ++ ++ + H+ V Y
Sbjct: 50 GKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKG 109
Query: 66 LAQKSERIVGLHEIYETPHEMVLVLEMVPDGELQ-RLVDIQDGIPEQDTRSYMKQILEAL 124
+ + R + L++E +P G L+ L ++ I Y QI + +
Sbjct: 110 VCYSAGR-----------RNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGM 158
Query: 125 AFLHDHNITHLDLKPQNILLTKDNNIKLCDFGISRVV---NDVVEVKEIIGTPD-YVAPE 180
+L H DL +NIL+ +N +K+ DFG+++V+ + +VKE +P + APE
Sbjct: 159 EYLGTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPE 218
Query: 181 VLSYEPISLATDMWSVGVLAYVLLS----SHSPFA------GDNKQ 216
L+ S+A+D+WS GV+ Y L + S SP A G++KQ
Sbjct: 219 SLTESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQ 264
>pdb|3IO7|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3IOK|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3KCK|A Chain A, A Novel Chemotype Of Kinase Inhibitors
Length = 313
Score = 66.6 bits (161), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 59/226 (26%), Positives = 107/226 (47%), Gaps = 40/226 (17%)
Query: 20 SRGKFASVRKCTH-----------KITKVEYAAK-FIRKRRRSMDQMQDILHEAAVLY-- 65
+G F SV C + + K++++ + +R R ++ ++ + H+ V Y
Sbjct: 37 GKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKG 96
Query: 66 LAQKSERIVGLHEIYETPHEMVLVLEMVPDGELQ-RLVDIQDGIPEQDTRSYMKQILEAL 124
+ + R + L++E +P G L+ L ++ I Y QI + +
Sbjct: 97 VCYSAGR-----------RNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGM 145
Query: 125 AFLHDHNITHLDLKPQNILLTKDNNIKLCDFGISRVV---NDVVEVKEIIGTPD-YVAPE 180
+L H DL +NIL+ +N +K+ DFG+++V+ + +VKE +P + APE
Sbjct: 146 EYLGTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPE 205
Query: 181 VLSYEPISLATDMWSVGVLAYVLLS----SHSPFA------GDNKQ 216
L+ S+A+D+WS GV+ Y L + S SP A G++KQ
Sbjct: 206 SLTESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQ 251
>pdb|1NA7|A Chain A, Crystal Structure Of The Catalytic Subunit Of Human
Protein Kinase Ck2
Length = 329
Score = 66.6 bits (161), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 54/225 (24%), Positives = 108/225 (48%), Gaps = 15/225 (6%)
Query: 20 SRGKFASVRKCTHKITKVEYAAKFIRKRRRSMDQMQDILHEAAVLYLAQKSERIVGLHEI 79
RGK++ V + + + K ++ +++ I E +L + I+ L +I
Sbjct: 46 GRGKYSEVFEAINITNNEKVVVKILKPVKKN-----KIKREIKILENLRGGPNIITLADI 100
Query: 80 YETP--HEMVLVLEMVPDGELQRLVDIQDGIPEQDTRSYMKQILEALAFLHDHNITHLDL 137
+ P LV E V + + ++L + + D R YM +IL+AL + H I H D+
Sbjct: 101 VKDPVSRTPALVFEHVNNTDFKQLYQT---LTDYDIRFYMYEILKALDYCHSMGIMHRDV 157
Query: 138 KPQNILLTKDN-NIKLCDFGISRVVNDVVEVKEIIGTPDYVAPEVL-SYEPISLATDMWS 195
KP N+++ ++ ++L D+G++ + E + + + PE+L Y+ + DMWS
Sbjct: 158 KPHNVMIDHEHRKLRLIDWGLAEFYHPGQEYNVRVASRYFKGPELLVDYQMYDYSLDMWS 217
Query: 196 VG-VLAYVLLSSHSPFAGDNKQETFLNISQCNFSFHEDLFGHISS 239
+G +LA ++ F G + + + I++ + EDL+ +I
Sbjct: 218 LGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGT--EDLYDYIDK 260
>pdb|4AQC|A Chain A, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
pdb|4AQC|B Chain B, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
Length = 301
Score = 66.6 bits (161), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 47/146 (32%), Positives = 78/146 (53%), Gaps = 15/146 (10%)
Query: 86 MVLVLEMVPDGELQR-LVDIQDGIPEQDTRSYMKQILEALAFLHDHNITHLDLKPQNILL 144
+ L++E +P G L+ L ++ I Y QI + + +L H DL +NIL+
Sbjct: 94 LKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLGTKRYIHRDLATRNILV 153
Query: 145 TKDNNIKLCDFGISRVV---NDVVEVKEIIGTPD-YVAPEVLSYEPISLATDMWSVGVLA 200
+N +K+ DFG+++V+ + +VKE +P + APE L+ S+A+D+WS GV+
Sbjct: 154 ENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVL 213
Query: 201 YVLLS----SHSPFA------GDNKQ 216
Y L + S SP A G++KQ
Sbjct: 214 YELFTYIEKSKSPPAEFMRMIGNDKQ 239
>pdb|3JY9|A Chain A, Janus Kinase 2 Inhibitors
Length = 311
Score = 66.6 bits (161), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 59/226 (26%), Positives = 107/226 (47%), Gaps = 40/226 (17%)
Query: 20 SRGKFASVRKCTH-----------KITKVEYAAK-FIRKRRRSMDQMQDILHEAAVLY-- 65
+G F SV C + + K++++ + +R R ++ ++ + H+ V Y
Sbjct: 37 GKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKG 96
Query: 66 LAQKSERIVGLHEIYETPHEMVLVLEMVPDGELQ-RLVDIQDGIPEQDTRSYMKQILEAL 124
+ + R + L++E +P G L+ L ++ I Y QI + +
Sbjct: 97 VCYSAGR-----------RNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGM 145
Query: 125 AFLHDHNITHLDLKPQNILLTKDNNIKLCDFGISRVV---NDVVEVKEIIGTPD-YVAPE 180
+L H DL +NIL+ +N +K+ DFG+++V+ + +VKE +P + APE
Sbjct: 146 EYLGTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPE 205
Query: 181 VLSYEPISLATDMWSVGVLAYVLLS----SHSPFA------GDNKQ 216
L+ S+A+D+WS GV+ Y L + S SP A G++KQ
Sbjct: 206 SLTESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQ 251
>pdb|3LLT|A Chain A, Crystal Structure Of Pf14_0431, Kinase Domain
Length = 360
Score = 66.6 bits (161), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 68/211 (32%), Positives = 92/211 (43%), Gaps = 38/211 (18%)
Query: 22 GKFASVRKCTHKITKVEYAAKFIR---KRRRSMDQMQDILHEAAVLYLAQKSERIVGLHE 78
G F V C H K YA K +R K RS DIL + + + IV H
Sbjct: 46 GTFGRVLLCQHIDNKKYYAVKVVRNIKKYTRSAKIEADILKK--IQNDDINNNNIVKYHG 103
Query: 79 IYETPHEMVLVLEMVPDG-ELQRLV--DIQDGIPEQDTRSYMKQILEALAFLHDHNITHL 135
+ M L+ E P G L ++ + +G +D + Y +IL+AL +L ++TH
Sbjct: 104 KFMYYDHMCLIFE--PLGPSLYEIITRNNYNGFHIEDIKLYCIEILKALNYLRKMSLTHT 161
Query: 136 DLKPQNILL-------------------------TKDNNIKLCDFGISRVVNDVVEVKEI 170
DLKP+NILL TK IKL DFG + +D I
Sbjct: 162 DLKPENILLDDPYFEKSLITVRRVTDGKKIQIYRTKSTGIKLIDFGCATFKSDY--HGSI 219
Query: 171 IGTPDYVAPEVLSYEPISLATDMWSVG-VLA 200
I T Y APEV+ +++DMWS G VLA
Sbjct: 220 INTRQYRAPEVILNLGWDVSSDMWSFGCVLA 250
>pdb|4HGE|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
pdb|4HGE|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
Length = 300
Score = 66.6 bits (161), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 59/226 (26%), Positives = 107/226 (47%), Gaps = 40/226 (17%)
Query: 20 SRGKFASVRKCTH-----------KITKVEYAAK-FIRKRRRSMDQMQDILHEAAVLY-- 65
+G F SV C + + K++++ + +R R ++ ++ + H+ V Y
Sbjct: 24 GKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKG 83
Query: 66 LAQKSERIVGLHEIYETPHEMVLVLEMVPDGELQR-LVDIQDGIPEQDTRSYMKQILEAL 124
+ + R + L++E +P G L+ L ++ I Y QI + +
Sbjct: 84 VCYSAGR-----------RNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGM 132
Query: 125 AFLHDHNITHLDLKPQNILLTKDNNIKLCDFGISRVV---NDVVEVKEIIGTPD-YVAPE 180
+L H DL +NIL+ +N +K+ DFG+++V+ + +VKE +P + APE
Sbjct: 133 EYLGTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPE 192
Query: 181 VLSYEPISLATDMWSVGVLAYVLLS----SHSPFA------GDNKQ 216
L+ S+A+D+WS GV+ Y L + S SP A G++KQ
Sbjct: 193 SLTESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQ 238
>pdb|4HCT|A Chain A, Crystal Structure Of Itk In Complex With Compound 52
pdb|4HCU|A Chain A, Crystal Structure Of Itk In Complext With Compound 40
pdb|4HCV|A Chain A, Crystal Structure Of Itk In Complex With Compound 53
Length = 269
Score = 66.6 bits (161), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 58/207 (28%), Positives = 99/207 (47%), Gaps = 11/207 (5%)
Query: 22 GKFASVRKCTHKITKVEYAAKFIRKRRRSMDQMQDILHEAAVLYLAQKSERIVGLHEIYE 81
G+F V + + K + A K IR+ S +D + EA V+ + ++V L+ +
Sbjct: 21 GQFGLVH-LGYWLNKDKVAIKTIREGAMSE---EDFIEEAEVM-MKLSHPKLVQLYGVCL 75
Query: 82 TPHEMVLVLEMVPDGELQRLVDIQDGIPEQDTRSYM-KQILEALAFLHDHNITHLDLKPQ 140
+ LV E + G L + Q G+ +T M + E +A+L + + H DL +
Sbjct: 76 EQAPICLVFEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLEEACVIHRDLAAR 135
Query: 141 NILLTKDNNIKLCDFGISRVVNDVVEVKEIIGTP---DYVAPEVLSYEPISLATDMWSVG 197
N L+ ++ IK+ DFG++R V D + GT + +PEV S+ S +D+WS G
Sbjct: 136 NCLVGENQVIKVSDFGMTRFVLD-DQYTSSTGTKFPVKWASPEVFSFSRYSSKSDVWSFG 194
Query: 198 VLAYVLLSSHS-PFAGDNKQETFLNIS 223
VL + + S P+ + E +IS
Sbjct: 195 VLMWEVFSEGKIPYENRSNSEVVEDIS 221
>pdb|3TJC|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJC|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJD|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 19
pdb|3TJD|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 19
Length = 298
Score = 66.6 bits (161), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 59/226 (26%), Positives = 107/226 (47%), Gaps = 40/226 (17%)
Query: 20 SRGKFASVRKCTH-----------KITKVEYAAK-FIRKRRRSMDQMQDILHEAAVLY-- 65
+G F SV C + + K++++ + +R R ++ ++ + H+ V Y
Sbjct: 22 GKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKG 81
Query: 66 LAQKSERIVGLHEIYETPHEMVLVLEMVPDGELQR-LVDIQDGIPEQDTRSYMKQILEAL 124
+ + R + L++E +P G L+ L ++ I Y QI + +
Sbjct: 82 VCYSAGR-----------RNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGM 130
Query: 125 AFLHDHNITHLDLKPQNILLTKDNNIKLCDFGISRVV---NDVVEVKEIIGTPD-YVAPE 180
+L H DL +NIL+ +N +K+ DFG+++V+ + +VKE +P + APE
Sbjct: 131 EYLGTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPE 190
Query: 181 VLSYEPISLATDMWSVGVLAYVLLS----SHSPFA------GDNKQ 216
L+ S+A+D+WS GV+ Y L + S SP A G++KQ
Sbjct: 191 SLTESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQ 236
>pdb|1SM2|A Chain A, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SM2|B Chain B, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|A Chain A, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|B Chain B, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNX|A Chain A, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
pdb|1SNX|B Chain B, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
Length = 264
Score = 66.6 bits (161), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 58/207 (28%), Positives = 99/207 (47%), Gaps = 11/207 (5%)
Query: 22 GKFASVRKCTHKITKVEYAAKFIRKRRRSMDQMQDILHEAAVLYLAQKSERIVGLHEIYE 81
G+F V + + K + A K IR+ S +D + EA V+ + ++V L+ +
Sbjct: 16 GQFGLVH-LGYWLNKDKVAIKTIREGAMSE---EDFIEEAEVM-MKLSHPKLVQLYGVCL 70
Query: 82 TPHEMVLVLEMVPDGELQRLVDIQDGIPEQDTRSYM-KQILEALAFLHDHNITHLDLKPQ 140
+ LV E + G L + Q G+ +T M + E +A+L + + H DL +
Sbjct: 71 EQAPICLVFEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLEEACVIHRDLAAR 130
Query: 141 NILLTKDNNIKLCDFGISRVVNDVVEVKEIIGTP---DYVAPEVLSYEPISLATDMWSVG 197
N L+ ++ IK+ DFG++R V D + GT + +PEV S+ S +D+WS G
Sbjct: 131 NCLVGENQVIKVSDFGMTRFVLD-DQYTSSTGTKFPVKWASPEVFSFSRYSSKSDVWSFG 189
Query: 198 VLAYVLLSSHS-PFAGDNKQETFLNIS 223
VL + + S P+ + E +IS
Sbjct: 190 VLMWEVFSEGKIPYENRSNSEVVEDIS 216
>pdb|3V5J|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5J|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5L|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|C Chain C, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|D Chain D, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V8T|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8T|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8W|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
pdb|3V8W|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
Length = 266
Score = 66.6 bits (161), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 58/207 (28%), Positives = 99/207 (47%), Gaps = 11/207 (5%)
Query: 22 GKFASVRKCTHKITKVEYAAKFIRKRRRSMDQMQDILHEAAVLYLAQKSERIVGLHEIYE 81
G+F V + + K + A K IR+ S +D + EA V+ + ++V L+ +
Sbjct: 18 GQFGLVH-LGYWLNKDKVAIKTIREGAMSE---EDFIEEAEVM-MKLSHPKLVQLYGVCL 72
Query: 82 TPHEMVLVLEMVPDGELQRLVDIQDGIPEQDTRSYM-KQILEALAFLHDHNITHLDLKPQ 140
+ LV E + G L + Q G+ +T M + E +A+L + + H DL +
Sbjct: 73 EQAPICLVFEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLEEACVIHRDLAAR 132
Query: 141 NILLTKDNNIKLCDFGISRVVNDVVEVKEIIGTP---DYVAPEVLSYEPISLATDMWSVG 197
N L+ ++ IK+ DFG++R V D + GT + +PEV S+ S +D+WS G
Sbjct: 133 NCLVGENQVIKVSDFGMTRFVLD-DQYTSSTGTKFPVKWASPEVFSFSRYSSKSDVWSFG 191
Query: 198 VLAYVLLSSHS-PFAGDNKQETFLNIS 223
VL + + S P+ + E +IS
Sbjct: 192 VLMWEVFSEGKIPYENRSNSEVVEDIS 218
>pdb|3Q32|A Chain A, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
pdb|3Q32|B Chain B, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
Length = 301
Score = 66.6 bits (161), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 59/226 (26%), Positives = 107/226 (47%), Gaps = 40/226 (17%)
Query: 20 SRGKFASVRKCTH-----------KITKVEYAAK-FIRKRRRSMDQMQDILHEAAVLY-- 65
+G F SV C + + K++++ + +R R ++ ++ + H+ V Y
Sbjct: 19 GKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKG 78
Query: 66 LAQKSERIVGLHEIYETPHEMVLVLEMVPDGELQ-RLVDIQDGIPEQDTRSYMKQILEAL 124
+ + R + L++E +P G L+ L ++ I Y QI + +
Sbjct: 79 VCYSAGR-----------RNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGM 127
Query: 125 AFLHDHNITHLDLKPQNILLTKDNNIKLCDFGISRVV---NDVVEVKEIIGTPD-YVAPE 180
+L H DL +NIL+ +N +K+ DFG+++V+ + +VKE +P + APE
Sbjct: 128 EYLGTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPE 187
Query: 181 VLSYEPISLATDMWSVGVLAYVLLS----SHSPFA------GDNKQ 216
L+ S+A+D+WS GV+ Y L + S SP A G++KQ
Sbjct: 188 SLTESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQ 233
>pdb|3LPB|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3LPB|B Chain B, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3KRR|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
Quinoxaline Atp Site Inhibitor
Length = 295
Score = 66.6 bits (161), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 59/226 (26%), Positives = 107/226 (47%), Gaps = 40/226 (17%)
Query: 20 SRGKFASVRKCTH-----------KITKVEYAAK-FIRKRRRSMDQMQDILHEAAVLY-- 65
+G F SV C + + K++++ + +R R ++ ++ + H+ V Y
Sbjct: 19 GKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKG 78
Query: 66 LAQKSERIVGLHEIYETPHEMVLVLEMVPDGELQ-RLVDIQDGIPEQDTRSYMKQILEAL 124
+ + R + L++E +P G L+ L ++ I Y QI + +
Sbjct: 79 VCYSAGR-----------RNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGM 127
Query: 125 AFLHDHNITHLDLKPQNILLTKDNNIKLCDFGISRVV---NDVVEVKEIIGTPD-YVAPE 180
+L H DL +NIL+ +N +K+ DFG+++V+ + +VKE +P + APE
Sbjct: 128 EYLGTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPE 187
Query: 181 VLSYEPISLATDMWSVGVLAYVLLS----SHSPFA------GDNKQ 216
L+ S+A+D+WS GV+ Y L + S SP A G++KQ
Sbjct: 188 SLTESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQ 233
>pdb|3E62|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E63|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E64|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
Length = 293
Score = 66.6 bits (161), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 47/146 (32%), Positives = 78/146 (53%), Gaps = 15/146 (10%)
Query: 86 MVLVLEMVPDGELQ-RLVDIQDGIPEQDTRSYMKQILEALAFLHDHNITHLDLKPQNILL 144
+ L++E +P G L+ L ++ I Y QI + + +L H DL +NIL+
Sbjct: 87 LKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLGTKRYIHRDLATRNILV 146
Query: 145 TKDNNIKLCDFGISRVV---NDVVEVKEIIGTPD-YVAPEVLSYEPISLATDMWSVGVLA 200
+N +K+ DFG+++V+ + +VKE +P + APE L+ S+A+D+WS GV+
Sbjct: 147 ENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVL 206
Query: 201 YVLLS----SHSPFA------GDNKQ 216
Y L + S SP A G++KQ
Sbjct: 207 YELFTYIEKSKSPPAEFMRMIGNDKQ 232
>pdb|3RVG|A Chain A, Crystals Structure Of Jak2 With A
1-Amino-5h-Pyrido[4,3-B]indol-4- Carboxamide Inhibitor
Length = 303
Score = 66.2 bits (160), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 47/146 (32%), Positives = 78/146 (53%), Gaps = 15/146 (10%)
Query: 86 MVLVLEMVPDGELQ-RLVDIQDGIPEQDTRSYMKQILEALAFLHDHNITHLDLKPQNILL 144
+ L++E +P G L+ L ++ I Y QI + + +L H DL +NIL+
Sbjct: 92 LKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLGTKRYIHRDLATRNILV 151
Query: 145 TKDNNIKLCDFGISRVV---NDVVEVKEIIGTPD-YVAPEVLSYEPISLATDMWSVGVLA 200
+N +K+ DFG+++V+ + +VKE +P + APE L+ S+A+D+WS GV+
Sbjct: 152 ENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVL 211
Query: 201 YVLLS----SHSPFA------GDNKQ 216
Y L + S SP A G++KQ
Sbjct: 212 YELFTYIEKSKSPPAEFMRMIGNDKQ 237
>pdb|2B7A|A Chain A, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|2B7A|B Chain B, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|3FUP|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3FUP|B Chain B, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 293
Score = 66.2 bits (160), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 59/226 (26%), Positives = 107/226 (47%), Gaps = 40/226 (17%)
Query: 20 SRGKFASVRKCTH-----------KITKVEYAAK-FIRKRRRSMDQMQDILHEAAVLY-- 65
+G F SV C + + K++++ + +R R ++ ++ + H+ V Y
Sbjct: 17 GKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKG 76
Query: 66 LAQKSERIVGLHEIYETPHEMVLVLEMVPDGELQ-RLVDIQDGIPEQDTRSYMKQILEAL 124
+ + R + L++E +P G L+ L ++ I Y QI + +
Sbjct: 77 VCYSAGR-----------RNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGM 125
Query: 125 AFLHDHNITHLDLKPQNILLTKDNNIKLCDFGISRVV---NDVVEVKEIIGTPD-YVAPE 180
+L H DL +NIL+ +N +K+ DFG+++V+ + +VKE +P + APE
Sbjct: 126 EYLGTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPE 185
Query: 181 VLSYEPISLATDMWSVGVLAYVLLS----SHSPFA------GDNKQ 216
L+ S+A+D+WS GV+ Y L + S SP A G++KQ
Sbjct: 186 SLTESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQ 231
>pdb|3SXR|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXR|B Chain B, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXS|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complexed With Pp2
Length = 268
Score = 66.2 bits (160), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 55/208 (26%), Positives = 93/208 (44%), Gaps = 11/208 (5%)
Query: 22 GKFASVRKCTHKITKVEYAAKFIRKRRRSMDQMQDILHEAAVLYLAQKSERIVGLHEIYE 81
G+F V+ K + + A K I++ S D + EA + + ++V + +
Sbjct: 19 GQFGVVKLGKWK-GQYDVAVKMIKEGSMSED---EFFQEAQTM-MKLSHPKLVKFYGVCS 73
Query: 82 TPHEMVLVLEMVPDG-ELQRLVDIQDGIPEQDTRSYMKQILEALAFLHDHNITHLDLKPQ 140
+ + +V E + +G L L G+ + E +AFL H H DL +
Sbjct: 74 KEYPIYIVTEYISNGCLLNYLRSHGKGLEPSQLLEMCYDVCEGMAFLESHQFIHRDLAAR 133
Query: 141 NILLTKDNNIKLCDFGISRVVNDVVEVKEIIGTP---DYVAPEVLSYEPISLATDMWSVG 197
N L+ +D +K+ DFG++R V D V +GT + APEV Y S +D+W+ G
Sbjct: 134 NCLVDRDLCVKVSDFGMTRYVLDDQYVSS-VGTKFPVKWSAPEVFHYFKYSSKSDVWAFG 192
Query: 198 VLAYVLLS-SHSPFAGDNKQETFLNISQ 224
+L + + S P+ E L +SQ
Sbjct: 193 ILMWEVFSLGKMPYDLYTNSEVVLKVSQ 220
>pdb|3LCK|A Chain A, The Kinase Domain Of Human Lymphocyte Kinase (Lck),
Activated Form (Auto-Phosphorylated On Tyr394)
pdb|3BYO|A Chain A, X-Ray Co-Crystal Structure Of 2-Amino-6-Phenylpyrimido[5',
4':5,6]pyrimido[1,2-A]benzimidazol-5(6h)-One 25 Bound To
Lck
Length = 271
Score = 66.2 bits (160), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 42/159 (26%), Positives = 79/159 (49%), Gaps = 6/159 (3%)
Query: 71 ERIVGLHEIYETPHEMVLVLEMVPDGELQRLVDIQDGIPEQDTR--SYMKQILEALAFLH 128
+R+V L+ + T + ++ E + +G L + GI + QI E +AF+
Sbjct: 68 QRLVRLYAVV-TQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIE 126
Query: 129 DHNITHLDLKPQNILLTKDNNIKLCDFGISRVVND-VVEVKEIIGTP-DYVAPEVLSYEP 186
+ N H DL+ NIL++ + K+ DFG++R++ D +E P + APE ++Y
Sbjct: 127 ERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIKWTAPEAINYGT 186
Query: 187 ISLATDMWSVGV-LAYVLLSSHSPFAGDNKQETFLNISQ 224
++ +D+WS G+ L ++ P+ G E N+ +
Sbjct: 187 FTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLER 225
>pdb|3BYM|A Chain A, X-Ray Co-Crystal Structure Aminobenzimidazole Triazine 1
Bound To Lck
Length = 272
Score = 66.2 bits (160), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 42/159 (26%), Positives = 79/159 (49%), Gaps = 6/159 (3%)
Query: 71 ERIVGLHEIYETPHEMVLVLEMVPDGELQRLVDIQDGIPEQDTR--SYMKQILEALAFLH 128
+R+V L+ + T + ++ E + +G L + GI + QI E +AF+
Sbjct: 69 QRLVRLYAVV-TQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIE 127
Query: 129 DHNITHLDLKPQNILLTKDNNIKLCDFGISRVVND-VVEVKEIIGTP-DYVAPEVLSYEP 186
+ N H DL+ NIL++ + K+ DFG++R++ D +E P + APE ++Y
Sbjct: 128 ERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIKWTAPEAINYGT 187
Query: 187 ISLATDMWSVGV-LAYVLLSSHSPFAGDNKQETFLNISQ 224
++ +D+WS G+ L ++ P+ G E N+ +
Sbjct: 188 FTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLER 226
>pdb|2OG8|A Chain A, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
pdb|2OG8|B Chain B, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
Length = 265
Score = 66.2 bits (160), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 42/159 (26%), Positives = 79/159 (49%), Gaps = 6/159 (3%)
Query: 71 ERIVGLHEIYETPHEMVLVLEMVPDGELQRLVDIQDGIPEQDTR--SYMKQILEALAFLH 128
+R+V L+ + T + ++ E + +G L + GI + QI E +AF+
Sbjct: 63 QRLVRLYAVV-TQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIE 121
Query: 129 DHNITHLDLKPQNILLTKDNNIKLCDFGISRVVND-VVEVKEIIGTP-DYVAPEVLSYEP 186
+ N H DL+ NIL++ + K+ DFG++R++ D +E P + APE ++Y
Sbjct: 122 ERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFPIKWTAPEAINYGT 181
Query: 187 ISLATDMWSVGV-LAYVLLSSHSPFAGDNKQETFLNISQ 224
++ +D+WS G+ L ++ P+ G E N+ +
Sbjct: 182 FTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLER 220
>pdb|3BYS|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Amide 10b
pdb|3BYU|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Reverse
Amide 23
Length = 277
Score = 66.2 bits (160), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 42/159 (26%), Positives = 79/159 (49%), Gaps = 6/159 (3%)
Query: 71 ERIVGLHEIYETPHEMVLVLEMVPDGELQRLVDIQDGIPEQDTR--SYMKQILEALAFLH 128
+R+V L+ + T + ++ E + +G L + GI + QI E +AF+
Sbjct: 74 QRLVRLYAVV-TQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIE 132
Query: 129 DHNITHLDLKPQNILLTKDNNIKLCDFGISRVVND-VVEVKEIIGTP-DYVAPEVLSYEP 186
+ N H DL+ NIL++ + K+ DFG++R++ D +E P + APE ++Y
Sbjct: 133 ERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFPIKWTAPEAINYGT 192
Query: 187 ISLATDMWSVGV-LAYVLLSSHSPFAGDNKQETFLNISQ 224
++ +D+WS G+ L ++ P+ G E N+ +
Sbjct: 193 FTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLER 231
>pdb|2XA4|A Chain A, Inhibitors Of Jak2 Kinase Domain
pdb|2XA4|B Chain B, Inhibitors Of Jak2 Kinase Domain
Length = 298
Score = 66.2 bits (160), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 58/226 (25%), Positives = 106/226 (46%), Gaps = 40/226 (17%)
Query: 20 SRGKFASVRKCTH-----------KITKVEYAAK-FIRKRRRSMDQMQDILHEAAVLY-- 65
+G F SV C + + K++++ + +R R ++ ++ + H+ V Y
Sbjct: 22 GKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKG 81
Query: 66 LAQKSERIVGLHEIYETPHEMVLVLEMVPDGELQRLVDIQ-DGIPEQDTRSYMKQILEAL 124
+ + R + L++E +P G L+ + + I Y QI + +
Sbjct: 82 VCYSAGR-----------RNLKLIMEYLPYGSLRDYLQAHAERIDHIKLLQYTSQICKGM 130
Query: 125 AFLHDHNITHLDLKPQNILLTKDNNIKLCDFGISRVV---NDVVEVKEIIGTPD-YVAPE 180
+L H DL +NIL+ +N +K+ DFG+++V+ + +VKE +P + APE
Sbjct: 131 EYLGTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPE 190
Query: 181 VLSYEPISLATDMWSVGVLAYVLLS----SHSPFA------GDNKQ 216
L+ S+A+D+WS GV+ Y L + S SP A G++KQ
Sbjct: 191 SLTESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQ 236
>pdb|2OFU|A Chain A, X-Ray Crystal Structure Of 2-Aminopyrimidine Carbamate 43
Bound To Lck
Length = 273
Score = 66.2 bits (160), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 42/159 (26%), Positives = 79/159 (49%), Gaps = 6/159 (3%)
Query: 71 ERIVGLHEIYETPHEMVLVLEMVPDGELQRLVDIQDGIPEQDTR--SYMKQILEALAFLH 128
+R+V L+ + T + ++ E + +G L + GI + QI E +AF+
Sbjct: 70 QRLVRLYAVV-TQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIE 128
Query: 129 DHNITHLDLKPQNILLTKDNNIKLCDFGISRVVND-VVEVKEIIGTP-DYVAPEVLSYEP 186
+ N H DL+ NIL++ + K+ DFG++R++ D +E P + APE ++Y
Sbjct: 129 ERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIKWTAPEAINYGT 188
Query: 187 ISLATDMWSVGV-LAYVLLSSHSPFAGDNKQETFLNISQ 224
++ +D+WS G+ L ++ P+ G E N+ +
Sbjct: 189 FTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLER 227
>pdb|2OFV|A Chain A, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|2OFV|B Chain B, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|3B2W|A Chain A, Crystal Structure Of Pyrimidine Amide 11 Bound To Lck
Length = 277
Score = 66.2 bits (160), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 42/159 (26%), Positives = 79/159 (49%), Gaps = 6/159 (3%)
Query: 71 ERIVGLHEIYETPHEMVLVLEMVPDGELQRLVDIQDGIPEQDTR--SYMKQILEALAFLH 128
+R+V L+ + T + ++ E + +G L + GI + QI E +AF+
Sbjct: 73 QRLVRLYAVV-TQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIE 131
Query: 129 DHNITHLDLKPQNILLTKDNNIKLCDFGISRVVND-VVEVKEIIGTP-DYVAPEVLSYEP 186
+ N H DL+ NIL++ + K+ DFG++R++ D +E P + APE ++Y
Sbjct: 132 ERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFPIKWTAPEAINYGT 191
Query: 187 ISLATDMWSVGV-LAYVLLSSHSPFAGDNKQETFLNISQ 224
++ +D+WS G+ L ++ P+ G E N+ +
Sbjct: 192 FTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLER 230
>pdb|3NZ0|A Chain A, Non-Phosphorylated Tyk2 Kinase With Cmp6
Length = 302
Score = 66.2 bits (160), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 45/132 (34%), Positives = 70/132 (53%), Gaps = 9/132 (6%)
Query: 86 MVLVLEMVPDGELQRLVDIQDGIPEQDTRSYMKQILEALAFLHDHNITHLDLKPQNILLT 145
+ LV+E VP G L+ + + I + +QI E +A+LH + H +L +N+LL
Sbjct: 93 LQLVMEYVPLGSLRDYLP-RHSIGLAQLLLFAQQICEGMAYLHAQHYIHRNLAARNVLLD 151
Query: 146 KDNNIKLCDFGISRVV---NDVVEVKEIIGTPD-YVAPEVLSYEPISLATDMWSVGVLAY 201
D +K+ DFG+++ V ++ V+E +P + APE L A+D+WS GV Y
Sbjct: 152 NDRLVKIGDFGLAKAVPEGHEYYRVREDGDSPVFWYAPECLKEYKFYYASDVWSFGVTLY 211
Query: 202 VLL----SSHSP 209
LL SS SP
Sbjct: 212 ELLTHCDSSQSP 223
>pdb|2OF2|A Chain A, Crystal Structure Of Furanopyrimidine 8 Bound To Lck
pdb|2OF4|A Chain A, Crystal Structure Of Furanopyrimidine 1 Bound To Lck
Length = 271
Score = 66.2 bits (160), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 42/159 (26%), Positives = 79/159 (49%), Gaps = 6/159 (3%)
Query: 71 ERIVGLHEIYETPHEMVLVLEMVPDGELQRLVDIQDGIPEQDTR--SYMKQILEALAFLH 128
+R+V L+ + T + ++ E + +G L + GI + QI E +AF+
Sbjct: 68 QRLVRLYAVV-TQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIE 126
Query: 129 DHNITHLDLKPQNILLTKDNNIKLCDFGISRVVND-VVEVKEIIGTP-DYVAPEVLSYEP 186
+ N H DL+ NIL++ + K+ DFG++R++ D +E P + APE ++Y
Sbjct: 127 ERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFPIKWTAPEAINYGT 186
Query: 187 ISLATDMWSVGV-LAYVLLSSHSPFAGDNKQETFLNISQ 224
++ +D+WS G+ L ++ P+ G E N+ +
Sbjct: 187 FTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLER 225
>pdb|3E3P|A Chain A, Glycogen Synthase Kinase From Leishmania Major
pdb|3E3P|B Chain B, Glycogen Synthase Kinase From Leishmania Major
Length = 360
Score = 66.2 bits (160), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 62/215 (28%), Positives = 100/215 (46%), Gaps = 26/215 (12%)
Query: 18 MPSRGKFASVRKCTHKITKVEYAAKFI----RKRRRSMDQMQD--ILHEAAVL----YLA 67
M +G F +V+ K T + A K + R R R + MQD +LH ++ Y
Sbjct: 30 MAGQGTFGTVQLGKEKSTGMSVAIKKVIQDPRFRNRELQIMQDLAVLHHPNIVQLQSYFY 89
Query: 68 QKSERIVGLHEIYETPHEMVLVLEMVPDGELQRLVD----IQDGIPEQDTRSYMKQILEA 123
ER +IY + +V+E VPD L R Q P + ++ Q++ +
Sbjct: 90 TLGER--DRRDIY-----LNVVMEYVPD-TLHRCCRNYYRRQVAPPPILIKVFLFQLIRS 141
Query: 124 LAFLH--DHNITHLDLKPQNILLTK-DNNIKLCDFGISRVVNDVVEVKEIIGTPDYVAPE 180
+ LH N+ H D+KP N+L+ + D +KLCDFG ++ ++ I + Y APE
Sbjct: 142 IGCLHLPSVNVCHRDIKPHNVLVNEADGTLKLCDFGSAKKLSPSEPNVAYICSRYYRAPE 201
Query: 181 -VLSYEPISLATDMWSVGVLAYVLLSSHSPFAGDN 214
+ + + A D+WSVG + ++ F GDN
Sbjct: 202 LIFGNQHYTTAVDIWSVGCIFAEMMLGEPIFRGDN 236
>pdb|3CY3|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And
The Jnk Inhibitor V
Length = 314
Score = 66.2 bits (160), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 51/184 (27%), Positives = 87/184 (47%), Gaps = 14/184 (7%)
Query: 73 IVGLHEIYETPHEMVLVLEMV-PDGELQRLVDIQDGIPEQDTRSYMKQILEALAFLHDHN 131
++ L + +E P VL+LE P +L + + + E+ RS+ Q+LEA+ H+
Sbjct: 104 VIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHCHNCG 163
Query: 132 ITHLDLKPQNILLTKDNN-IKLCDFGISRVVNDVVEVKEIIGTPDYVAPEVLSYEPI-SL 189
+ H D+K +NIL+ + +KL DFG ++ D V + GT Y PE + Y
Sbjct: 164 VLHRDIKDENILIDLNRGELKLIDFGSGALLKDTV-YTDFDGTRVYSPPEWIRYHRYHGR 222
Query: 190 ATDMWSVGVLAYVLLSSHSPFAGDNKQETFLNISQCNFSFHEDLFGHISSQAKDFIQSCL 249
+ +WS+G+L Y ++ PF D + I F + +S + + I+ CL
Sbjct: 223 SAAVWSLGILLYDMVCGDIPFEHDEE------IIGGQVFFRQ----RVSXECQHLIRWCL 272
Query: 250 VTDP 253
P
Sbjct: 273 ALRP 276
>pdb|3KXZ|A Chain A, The Complex Crystal Structure Of Lck With A Probe Molecule
W259
Length = 287
Score = 65.9 bits (159), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 42/159 (26%), Positives = 79/159 (49%), Gaps = 6/159 (3%)
Query: 71 ERIVGLHEIYETPHEMVLVLEMVPDGELQRLVDIQDGIPEQDTR--SYMKQILEALAFLH 128
+R+V L+ + T + ++ E + +G L + GI + QI E +AF+
Sbjct: 76 QRLVRLYAVV-TQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIE 134
Query: 129 DHNITHLDLKPQNILLTKDNNIKLCDFGISRVVND-VVEVKEIIGTP-DYVAPEVLSYEP 186
+ N H DL+ NIL++ + K+ DFG++R++ D +E P + APE ++Y
Sbjct: 135 ERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIKWTAPEAINYGT 194
Query: 187 ISLATDMWSVGV-LAYVLLSSHSPFAGDNKQETFLNISQ 224
++ +D+WS G+ L ++ P+ G E N+ +
Sbjct: 195 FTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLER 233
>pdb|1QPE|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
pdb|1QPJ|A Chain A, Crystal Structure Of The Lymphocyte-Specific Kinase Lck In
Complex With Staurosporine.
pdb|1QPC|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 65.9 bits (159), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 42/159 (26%), Positives = 79/159 (49%), Gaps = 6/159 (3%)
Query: 71 ERIVGLHEIYETPHEMVLVLEMVPDGELQRLVDIQDGIPEQDTR--SYMKQILEALAFLH 128
+R+V L+ + T + ++ E + +G L + GI + QI E +AF+
Sbjct: 68 QRLVRLYAVV-TQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIE 126
Query: 129 DHNITHLDLKPQNILLTKDNNIKLCDFGISRVVND-VVEVKEIIGTP-DYVAPEVLSYEP 186
+ N H DL+ NIL++ + K+ DFG++R++ D +E P + APE ++Y
Sbjct: 127 ERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIKWTAPEAINYGT 186
Query: 187 ISLATDMWSVGV-LAYVLLSSHSPFAGDNKQETFLNISQ 224
++ +D+WS G+ L ++ P+ G E N+ +
Sbjct: 187 FTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLER 225
>pdb|3KMM|A Chain A, Structure Of Human Lck Kinase With A Small Molecule
Inhibitor
Length = 288
Score = 65.9 bits (159), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 42/159 (26%), Positives = 79/159 (49%), Gaps = 6/159 (3%)
Query: 71 ERIVGLHEIYETPHEMVLVLEMVPDGELQRLVDIQDGIPEQDTR--SYMKQILEALAFLH 128
+R+V L+ + T + ++ E + +G L + GI + QI E +AF+
Sbjct: 77 QRLVRLYAVV-TQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIE 135
Query: 129 DHNITHLDLKPQNILLTKDNNIKLCDFGISRVVND-VVEVKEIIGTP-DYVAPEVLSYEP 186
+ N H DL+ NIL++ + K+ DFG++R++ D +E P + APE ++Y
Sbjct: 136 ERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIKWTAPEAINYGT 195
Query: 187 ISLATDMWSVGV-LAYVLLSSHSPFAGDNKQETFLNISQ 224
++ +D+WS G+ L ++ P+ G E N+ +
Sbjct: 196 FTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLER 234
>pdb|2ZM1|A Chain A, Crystal Structure Of Imidazo Pyrazin 1 Bound To The Kinase
Domain Of Human Lck, (Auto-Phosphorylated On Tyr394)
pdb|2ZM4|A Chain A, Crystal Structure Of Imidazo Quinoxaline 1 Bound To The
Kinase Domain Of Human Lck, Activated Form (Auto-
Phosphorylated On Tyr394)
pdb|2ZYB|A Chain A, Crystal Structure Of Phenylimidazo Pyrazin 2 Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC1|A Chain A, Crystal Structure Of Pyrazin Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC2|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC3|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC4|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC5|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC8|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACJ|A Chain A, Crystal Structure Of Imidazo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACK|A Chain A, Crystal Structure Of Pyrrolo Pyrazine Derivative Bound To
The Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD4|A Chain A, Crystal Structure Of Methoxy Benzofuran Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AD5|A Chain A, Crystal Structure Of Triazolone Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD6|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
Length = 285
Score = 65.9 bits (159), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 42/159 (26%), Positives = 79/159 (49%), Gaps = 6/159 (3%)
Query: 71 ERIVGLHEIYETPHEMVLVLEMVPDGELQRLVDIQDGIPEQDTR--SYMKQILEALAFLH 128
+R+V L+ + T + ++ E + +G L + GI + QI E +AF+
Sbjct: 74 QRLVRLYAVV-TQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIE 132
Query: 129 DHNITHLDLKPQNILLTKDNNIKLCDFGISRVVND-VVEVKEIIGTP-DYVAPEVLSYEP 186
+ N H DL+ NIL++ + K+ DFG++R++ D +E P + APE ++Y
Sbjct: 133 ERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIKWTAPEAINYGT 192
Query: 187 ISLATDMWSVGV-LAYVLLSSHSPFAGDNKQETFLNISQ 224
++ +D+WS G+ L ++ P+ G E N+ +
Sbjct: 193 FTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLER 231
>pdb|2PL0|A Chain A, Lck Bound To Imatinib
Length = 289
Score = 65.9 bits (159), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 42/159 (26%), Positives = 79/159 (49%), Gaps = 6/159 (3%)
Query: 71 ERIVGLHEIYETPHEMVLVLEMVPDGELQRLVDIQDGIPEQDTR--SYMKQILEALAFLH 128
+R+V L+ + T + ++ E + +G L + GI + QI E +AF+
Sbjct: 78 QRLVRLYAVV-TQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIE 136
Query: 129 DHNITHLDLKPQNILLTKDNNIKLCDFGISRVVND-VVEVKEIIGTP-DYVAPEVLSYEP 186
+ N H DL+ NIL++ + K+ DFG++R++ D +E P + APE ++Y
Sbjct: 137 ERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFPIKWTAPEAINYGT 196
Query: 187 ISLATDMWSVGV-LAYVLLSSHSPFAGDNKQETFLNISQ 224
++ +D+WS G+ L ++ P+ G E N+ +
Sbjct: 197 FTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLER 235
>pdb|2BIK|B Chain B, Human Pim1 Phosphorylated On Ser261
pdb|2BZI|B Chain B, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru2
Length = 313
Score = 65.9 bits (159), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 51/184 (27%), Positives = 87/184 (47%), Gaps = 14/184 (7%)
Query: 73 IVGLHEIYETPHEMVLVLEMV-PDGELQRLVDIQDGIPEQDTRSYMKQILEALAFLHDHN 131
++ L + +E P VL+LE P +L + + + E+ RS+ Q+LEA+ H+
Sbjct: 103 VIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHCHNCG 162
Query: 132 ITHLDLKPQNILLTKDNN-IKLCDFGISRVVNDVVEVKEIIGTPDYVAPEVLSYEPI-SL 189
+ H D+K +NIL+ + +KL DFG ++ D V + GT Y PE + Y
Sbjct: 163 VLHRDIKDENILIDLNRGELKLIDFGSGALLKDTV-YTDFDGTRVYSPPEWIRYHRYHGR 221
Query: 190 ATDMWSVGVLAYVLLSSHSPFAGDNKQETFLNISQCNFSFHEDLFGHISSQAKDFIQSCL 249
+ +WS+G+L Y ++ PF D + I F + +S + + I+ CL
Sbjct: 222 SAAVWSLGILLYDMVCGDIPFEHDEE------IIGGQVFFRQ----RVSXECQHLIRWCL 271
Query: 250 VTDP 253
P
Sbjct: 272 ALRP 275
>pdb|3MA3|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Naphtho-Difuran Ligand
Length = 313
Score = 65.9 bits (159), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 51/184 (27%), Positives = 87/184 (47%), Gaps = 14/184 (7%)
Query: 73 IVGLHEIYETPHEMVLVLEMV-PDGELQRLVDIQDGIPEQDTRSYMKQILEALAFLHDHN 131
++ L + +E P VL+LE P +L + + + E+ RS+ Q+LEA+ H+
Sbjct: 104 VIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHCHNCG 163
Query: 132 ITHLDLKPQNILLTKDNN-IKLCDFGISRVVNDVVEVKEIIGTPDYVAPEVLSYEPI-SL 189
+ H D+K +NIL+ + +KL DFG ++ D V + GT Y PE + Y
Sbjct: 164 VLHRDIKDENILIDLNRGELKLIDFGSGALLKDTV-YTDFDGTRVYSPPEWIRYHRYHGR 222
Query: 190 ATDMWSVGVLAYVLLSSHSPFAGDNKQETFLNISQCNFSFHEDLFGHISSQAKDFIQSCL 249
+ +WS+G+L Y ++ PF D + I F + +S + + I+ CL
Sbjct: 223 SAAVWSLGILLYDMVCGDIPFEHDEE------IIGGQVFFRQ----RVSXECQHLIRWCL 272
Query: 250 VTDP 253
P
Sbjct: 273 ALRP 276
>pdb|3T9T|A Chain A, Crystal Structure Of Btk Mutant (F435t,K596r) Complexed
With Imidazo[1,5-A]quinoxaline
Length = 267
Score = 65.9 bits (159), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 58/207 (28%), Positives = 99/207 (47%), Gaps = 11/207 (5%)
Query: 22 GKFASVRKCTHKITKVEYAAKFIRKRRRSMDQMQDILHEAAVLYLAQKSERIVGLHEIYE 81
G+F V + + K + A K IR+ S +D + EA V+ + ++V L+ +
Sbjct: 19 GQFGLVH-LGYWLNKDKVAIKTIREGAMSE---EDFIEEAEVM-MKLSHPKLVQLYGVCL 73
Query: 82 TPHEMVLVLEMVPDGELQRLVDIQDGIPEQDTRSYM-KQILEALAFLHDHNITHLDLKPQ 140
+ LV E + G L + Q G+ +T M + E +A+L + + H DL +
Sbjct: 74 EQAPICLVTEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLEEACVIHRDLAAR 133
Query: 141 NILLTKDNNIKLCDFGISRVVNDVVEVKEIIGTP---DYVAPEVLSYEPISLATDMWSVG 197
N L+ ++ IK+ DFG++R V D + GT + +PEV S+ S +D+WS G
Sbjct: 134 NCLVGENQVIKVSDFGMTRFVLD-DQYTSSTGTKFPVKWASPEVFSFSRYSSKSDVWSFG 192
Query: 198 VLAYVLLSSHS-PFAGDNKQETFLNIS 223
VL + + S P+ + E +IS
Sbjct: 193 VLMWEVFSEGKIPYENRSNSEVVEDIS 219
>pdb|3C4C|A Chain A, B-Raf Kinase In Complex With Plx4720
pdb|3C4C|B Chain B, B-Raf Kinase In Complex With Plx4720
Length = 280
Score = 65.5 bits (158), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 35/132 (26%), Positives = 72/132 (54%), Gaps = 18/132 (13%)
Query: 97 ELQRLVDIQDGIPEQDTRSYMKQILEALAFLHDHNITHLDLKPQNILLTKDNNIKLCDFG 156
E+++L+DI +Q + +LH +I H DLK NI L +DN +K+ DFG
Sbjct: 106 EMKKLIDI------------ARQTARGMDYLHAKSIIHRDLKSNNIFLHEDNTVKIGDFG 153
Query: 157 ISRVVNDVV---EVKEIIGTPDYVAPEVLSYE---PISLATDMWSVGVLAYVLLSSHSPF 210
++ V + + +++ G+ ++APEV+ + P S +D+++ G++ Y L++ P+
Sbjct: 154 LATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDSNPYSFQSDVYAFGIVLYELMTGQLPY 213
Query: 211 AGDNKQETFLNI 222
+ N ++ + +
Sbjct: 214 SNINNRDQIIEM 225
>pdb|1MQB|A Chain A, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
pdb|1MQB|B Chain B, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
Length = 333
Score = 65.5 bits (158), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 54/200 (27%), Positives = 92/200 (46%), Gaps = 14/200 (7%)
Query: 22 GKFASVRKCTHKIT----KVEYAAKFIRKRRRSMDQMQDILHEAAVLYLAQKSE-RIVGL 76
G+F V K K + +V A K + K + Q D L EA ++ Q S I+ L
Sbjct: 55 GEFGEVYKGMLKTSSGKKEVPVAIKTL-KAGYTEKQRVDFLGEAGIM--GQFSHHNIIRL 111
Query: 77 HEIYETPHEMVLVLEMVPDGELQRLVDIQDG-IPEQDTRSYMKQILEALAFLHDHNITHL 135
+ M+++ E + +G L + + +DG ++ I + +L + N H
Sbjct: 112 EGVISKYKPMMIITEYMENGALDKFLREKDGEFSVLQLVGMLRGIAAGMKYLANMNYVHR 171
Query: 136 DLKPQNILLTKDNNIKLCDFGISRVVNDVVEVKEIIGTPD----YVAPEVLSYEPISLAT 191
DL +NIL+ + K+ DFG+SRV+ D E + APE +SY + A+
Sbjct: 172 DLAARNILVNSNLVCKVSDFGLSRVLEDDPEATYTTSGGKIPIRWTAPEAISYRKFTSAS 231
Query: 192 DMWSVGVLAY-VLLSSHSPF 210
D+WS G++ + V+ P+
Sbjct: 232 DVWSFGIVMWEVMTYGERPY 251
>pdb|4B99|A Chain A, Crystal Structure Of Mapk7 (Erk5) With Inhibitor
Length = 398
Score = 65.5 bits (158), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 52/205 (25%), Positives = 98/205 (47%), Gaps = 14/205 (6%)
Query: 22 GKFASVRKCTHKITKVEYAAKFIRKRRRSMDQMQDILHEAAVLYLAQKSERIVGLHEI-- 79
G + V ++T + A K I + + L E +L K + I+ + +I
Sbjct: 65 GAYGVVSSARRRLTGQQVAIKKIPNAFDVVTNAKRTLRELKILKHF-KHDNIIAIKDILR 123
Query: 80 ----YETPHEMVLVLEMVPDGELQRLVDIQDGIPEQDTRSYMKQILEALAFLHDHNITHL 135
Y + +VL+++ + +L +++ + + R ++ Q+L L ++H + H
Sbjct: 124 PTVPYGEFKSVYVVLDLM-ESDLHQIIHSSQPLTLEHVRYFLYQLLRGLKYMHSAQVIHR 182
Query: 136 DLKPQNILLTKDNNIKLCDFGISR-VVNDVVE----VKEIIGTPDYVAPEV-LSYEPISL 189
DLKP N+L+ ++ +K+ DFG++R + E + E + T Y APE+ LS +
Sbjct: 183 DLKPSNLLVNENCELKIGDFGMARGLCTSPAEHQYFMTEYVATRWYRAPELMLSLHEYTQ 242
Query: 190 ATDMWSVGVLAYVLLSSHSPFAGDN 214
A D+WSVG + +L+ F G N
Sbjct: 243 AIDLWSVGCIFGEMLARRQLFPGKN 267
>pdb|2J0L|A Chain A, Crystal Structure Of A The Active Conformation Of The
Kinase Domain Of Focal Adhesion Kinase With A
Phosphorylated Activation Loop
Length = 276
Score = 65.5 bits (158), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 38/135 (28%), Positives = 72/135 (53%), Gaps = 4/135 (2%)
Query: 82 TPHEMVLVLEMVPDGELQRLVDIQD-GIPEQDTRSYMKQILEALAFLHDHNITHLDLKPQ 140
T + + +++E+ GEL+ + ++ + Y Q+ ALA+L H D+ +
Sbjct: 81 TENPVWIIMELCTLGELRSFLQVRKFSLDLASLILYAYQLSTALAYLESKRFVHRDIAAR 140
Query: 141 NILLTKDNNIKLCDFGISRVVNDVVEVKEIIGT-P-DYVAPEVLSYEPISLATDMWSVGV 198
N+L++ ++ +KL DFG+SR + D K G P ++APE +++ + A+D+W GV
Sbjct: 141 NVLVSSNDCVKLGDFGLSRYMEDSTXXKASKGKLPIKWMAPESINFRRFTSASDVWMFGV 200
Query: 199 LAY-VLLSSHSPFAG 212
+ +L+ PF G
Sbjct: 201 CMWEILMHGVKPFQG 215
>pdb|4IC7|A Chain A, Crystal Structure Of The Erk5 Kinase Domain In Complex
With An Mkk5 Binding Fragment
pdb|4IC7|D Chain D, Crystal Structure Of The Erk5 Kinase Domain In Complex
With An Mkk5 Binding Fragment
pdb|4IC8|A Chain A, Crystal Structure Of The Apo Erk5 Kinase Domain
pdb|4IC8|B Chain B, Crystal Structure Of The Apo Erk5 Kinase Domain
Length = 442
Score = 65.1 bits (157), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 52/205 (25%), Positives = 98/205 (47%), Gaps = 14/205 (6%)
Query: 22 GKFASVRKCTHKITKVEYAAKFIRKRRRSMDQMQDILHEAAVLYLAQKSERIVGLHEI-- 79
G + V ++T + A K I + + L E +L K + I+ + +I
Sbjct: 66 GAYGVVSSARRRLTGQQVAIKKIPNAFDVVTNAKRTLRELKILKHF-KHDNIIAIKDILR 124
Query: 80 ----YETPHEMVLVLEMVPDGELQRLVDIQDGIPEQDTRSYMKQILEALAFLHDHNITHL 135
Y + +VL+++ + +L +++ + + R ++ Q+L L ++H + H
Sbjct: 125 PTVPYGEFKSVYVVLDLM-ESDLHQIIHSSQPLTLEHVRYFLYQLLRGLKYMHSAQVIHR 183
Query: 136 DLKPQNILLTKDNNIKLCDFGISR-VVNDVVE----VKEIIGTPDYVAPEV-LSYEPISL 189
DLKP N+L+ ++ +K+ DFG++R + E + E + T Y APE+ LS +
Sbjct: 184 DLKPSNLLVNENCELKIGDFGMARGLCTSPAEHQYFMTEYVATRWYRAPELMLSLHEYTQ 243
Query: 190 ATDMWSVGVLAYVLLSSHSPFAGDN 214
A D+WSVG + +L+ F G N
Sbjct: 244 AIDLWSVGCIFGEMLARRQLFPGKN 268
>pdb|4BBE|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
Length = 298
Score = 65.1 bits (157), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 58/226 (25%), Positives = 107/226 (47%), Gaps = 40/226 (17%)
Query: 20 SRGKFASVRKCTH-----------KITKVEYAAK-FIRKRRRSMDQMQDILHEAAVLY-- 65
+G F SV C + + K++++ + +R R ++ ++ + H+ V Y
Sbjct: 20 GKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKG 79
Query: 66 LAQKSERIVGLHEIYETPHEMVLVLEMVPDGELQ-RLVDIQDGIPEQDTRSYMKQILEAL 124
+ + R + L++E +P G L+ L ++ I Y QI + +
Sbjct: 80 VCYSAGR-----------RNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGM 128
Query: 125 AFLHDHNITHLDLKPQNILLTKDNNIKLCDFGISRVV---NDVVEVKEIIGTPD-YVAPE 180
+L H +L +NIL+ +N +K+ DFG+++V+ + +VKE +P + APE
Sbjct: 129 EYLGTKRYIHRNLATRNILVENENRVKIGDFGLTKVLPQDKEYYKVKEPGESPIFWYAPE 188
Query: 181 VLSYEPISLATDMWSVGVLAYVLLS----SHSPFA------GDNKQ 216
L+ S+A+D+WS GV+ Y L + S SP A G++KQ
Sbjct: 189 SLTESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQ 234
>pdb|3E3B|X Chain X, Crystal Structure Of Catalytic Subunit Of Human Protein
Kinase Ck2alpha Prime With A Potent Indazole-Derivative
Inhibitor
Length = 339
Score = 65.1 bits (157), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 40/154 (25%), Positives = 82/154 (53%), Gaps = 8/154 (5%)
Query: 87 VLVLEMVPDGELQRLVDIQDGIPEQDTRSYMKQILEALAFLHDHNITHLDLKPQNILLT- 145
LV E + + + ++L I + + D R YM ++L+AL + H I H D+KP N+++
Sbjct: 116 ALVFEYINNTDFKQLYQI---LTDFDIRFYMYELLKALDYCHSKGIMHRDVKPHNVMIDH 172
Query: 146 KDNNIKLCDFGISRVVNDVVEVKEIIGTPDYVAPEVL-SYEPISLATDMWSVG-VLAYVL 203
+ ++L D+G++ + E + + + PE+L Y+ + DMWS+G +LA ++
Sbjct: 173 QQKKLRLIDWGLAEFYHPAQEYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMI 232
Query: 204 LSSHSPFAGDNKQETFLNISQCNFSFHEDLFGHI 237
F G + + + I++ + E+L+G++
Sbjct: 233 FRREPFFHGQDNYDQLVRIAKVLGT--EELYGYL 264
>pdb|3K54|A Chain A, Structures Of Human Bruton's Tyrosine Kinase In Active And
Inactive Conformations Suggests A Mechanism Of
Activation For Tec Family Kinases
Length = 283
Score = 65.1 bits (157), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 55/208 (26%), Positives = 97/208 (46%), Gaps = 11/208 (5%)
Query: 22 GKFASVRKCTHKITKVEYAAKFIRKRRRSMDQMQDILHEAAVLYLAQKSERIVGLHEIYE 81
G+F V+ + + + A K I++ S D+ + EA V+ + E++V L+ +
Sbjct: 35 GQFGVVKYGKWR-GQYDVAIKMIKEGSMSEDE---FIEEAKVM-MNLSHEKLVQLYGVCT 89
Query: 82 TPHEMVLVLEMVPDG-ELQRLVDIQDGIPEQDTRSYMKQILEALAFLHDHNITHLDLKPQ 140
+ ++ E + +G L L +++ Q K + EA+ +L H DL +
Sbjct: 90 KQRPIFIITEYMANGCLLNYLREMRHRFQTQQLLEMCKDVCEAMEYLESKQFLHRDLAAR 149
Query: 141 NILLTKDNNIKLCDFGISRVVNDVVEVKEIIGTP---DYVAPEVLSYEPISLATDMWSVG 197
N L+ +K+ DFG+SR V D E +G+ + PEVL Y S +D+W+ G
Sbjct: 150 NCLVNDQGVVKVSDFGLSRYVLDDEETSS-VGSKFPVRWSPPEVLMYSKFSSKSDIWAFG 208
Query: 198 VLAYVLLS-SHSPFAGDNKQETFLNISQ 224
VL + + S P+ ET +I+Q
Sbjct: 209 VLMWEIYSLGKMPYERFTNSETAEHIAQ 236
>pdb|3OFM|A Chain A, Structure Of A Human Ck2alpha Prime, The Paralog Isoform
Of The Catalytic Subunit Of Protein Kinase Ck2 From Homo
Sapiens
Length = 350
Score = 65.1 bits (157), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 40/154 (25%), Positives = 82/154 (53%), Gaps = 8/154 (5%)
Query: 87 VLVLEMVPDGELQRLVDIQDGIPEQDTRSYMKQILEALAFLHDHNITHLDLKPQNILLT- 145
LV E + + + ++L I + + D R YM ++L+AL + H I H D+KP N+++
Sbjct: 111 ALVFEYINNTDFKQLYQI---LTDFDIRFYMYELLKALDYCHSKGIMHRDVKPHNVMIDH 167
Query: 146 KDNNIKLCDFGISRVVNDVVEVKEIIGTPDYVAPEVL-SYEPISLATDMWSVG-VLAYVL 203
+ ++L D+G++ + E + + + PE+L Y+ + DMWS+G +LA ++
Sbjct: 168 QQKKLRLIDWGLAEFYHPAQEYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMI 227
Query: 204 LSSHSPFAGDNKQETFLNISQCNFSFHEDLFGHI 237
F G + + + I++ + E+L+G++
Sbjct: 228 FRREPFFHGQDNYDQLVRIAKVLGT--EELYGYL 259
>pdb|3OCS|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase In Complex
With Inhibitor Cgi1746
Length = 271
Score = 65.1 bits (157), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 55/208 (26%), Positives = 97/208 (46%), Gaps = 11/208 (5%)
Query: 22 GKFASVRKCTHKITKVEYAAKFIRKRRRSMDQMQDILHEAAVLYLAQKSERIVGLHEIYE 81
G+F V+ + + + A K I++ S D+ + EA V+ + E++V L+ +
Sbjct: 20 GQFGVVKYGKWR-GQYDVAIKMIKEGSMSEDE---FIEEAKVM-MNLSHEKLVQLYGVCT 74
Query: 82 TPHEMVLVLEMVPDG-ELQRLVDIQDGIPEQDTRSYMKQILEALAFLHDHNITHLDLKPQ 140
+ ++ E + +G L L +++ Q K + EA+ +L H DL +
Sbjct: 75 KQRPIFIITEYMANGCLLNYLREMRHRFQTQQLLEMCKDVCEAMEYLESKQFLHRDLAAR 134
Query: 141 NILLTKDNNIKLCDFGISRVVNDVVEVKEIIGTP---DYVAPEVLSYEPISLATDMWSVG 197
N L+ +K+ DFG+SR V D E +G+ + PEVL Y S +D+W+ G
Sbjct: 135 NCLVNDQGVVKVSDFGLSRYVLD-DEYTSSVGSKFPVRWSPPEVLMYSKFSSKSDIWAFG 193
Query: 198 VLAYVLLS-SHSPFAGDNKQETFLNISQ 224
VL + + S P+ ET +I+Q
Sbjct: 194 VLMWEIYSLGKMPYERFTNSETAEHIAQ 221
>pdb|1MP8|A Chain A, Crystal Structure Of Focal Adhesion Kinase (Fak)
pdb|4I4F|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With An Allosteric Binding Pyrazolobenzothiazine
Compound
Length = 281
Score = 65.1 bits (157), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 38/135 (28%), Positives = 72/135 (53%), Gaps = 4/135 (2%)
Query: 82 TPHEMVLVLEMVPDGELQRLVDIQD-GIPEQDTRSYMKQILEALAFLHDHNITHLDLKPQ 140
T + + +++E+ GEL+ + ++ + Y Q+ ALA+L H D+ +
Sbjct: 86 TENPVWIIMELCTLGELRSFLQVRKYSLDLASLILYAYQLSTALAYLESKRFVHRDIAAR 145
Query: 141 NILLTKDNNIKLCDFGISRVVNDVVEVKEIIGT-P-DYVAPEVLSYEPISLATDMWSVGV 198
N+L++ ++ +KL DFG+SR + D K G P ++APE +++ + A+D+W GV
Sbjct: 146 NVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPESINFRRFTSASDVWMFGV 205
Query: 199 LAY-VLLSSHSPFAG 212
+ +L+ PF G
Sbjct: 206 CMWEILMHGVKPFQG 220
>pdb|3PIX|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Isopropyl-7-
(4-Methyl-Piperazin-1-Yl)-4-(5-Methyl-2h-Pyrazol-3-
Ylamino)-2h- Phthalazin-1-One
pdb|3PIY|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With R406
pdb|3PIZ|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
(5-Amino-1-O-
Tolyl-1h-Pyrazol-4-Yl)-[3-(1-Methanesulfonyl-Piperidin-
4-Yl)-Phenyl]- Methanone
pdb|3PJ1|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
3-(2,6-Dichloro-
Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-Phenylamino]-1-
Methyl-3,4- Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3PJ2|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-[4-(2-
Diethylamino-Ethoxy)-Phenylamino]-6-(4-Fluoro-Phenoxy)-
8-Methyl-8h- Pyrido[2,3-D]pyrimidin-7-One
pdb|3PJ3|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Methyl-5-[(E)-
(3-Phenyl-Acryloyl)amino]-N-(2-Phenyl-3h-Imidazo[4,
5-B]pyridin-6-Yl)- Benzamide
Length = 274
Score = 65.1 bits (157), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 55/208 (26%), Positives = 97/208 (46%), Gaps = 11/208 (5%)
Query: 22 GKFASVRKCTHKITKVEYAAKFIRKRRRSMDQMQDILHEAAVLYLAQKSERIVGLHEIYE 81
G+F V+ + + + A K I++ S D+ + EA V+ + E++V L+ +
Sbjct: 26 GQFGVVKYGKWR-GQYDVAIKMIKEGSMSEDE---FIEEAKVM-MNLSHEKLVQLYGVCT 80
Query: 82 TPHEMVLVLEMVPDG-ELQRLVDIQDGIPEQDTRSYMKQILEALAFLHDHNITHLDLKPQ 140
+ ++ E + +G L L +++ Q K + EA+ +L H DL +
Sbjct: 81 KQRPIFIITEYMANGCLLNYLREMRHRFQTQQLLEMCKDVCEAMEYLESKQFLHRDLAAR 140
Query: 141 NILLTKDNNIKLCDFGISRVVNDVVEVKEIIGTP---DYVAPEVLSYEPISLATDMWSVG 197
N L+ +K+ DFG+SR V D E +G+ + PEVL Y S +D+W+ G
Sbjct: 141 NCLVNDQGVVKVSDFGLSRYVLD-DEYTSSVGSKFPVRWSPPEVLMYSKFSSKSDIWAFG 199
Query: 198 VLAYVLLS-SHSPFAGDNKQETFLNISQ 224
VL + + S P+ ET +I+Q
Sbjct: 200 VLMWEIYSLGKMPYERFTNSETAEHIAQ 227
>pdb|2ZV7|A Chain A, Lyn Tyrosine Kinase Domain, Apo Form
pdb|2ZV8|A Chain A, Lyn Tyrosine Kinase Domain-Amp-Pnp Complex
pdb|2ZV9|A Chain A, Lyn Tyrosine Kinase Domain-Pp2 Complex
pdb|2ZVA|A Chain A, Lyn Tyrosine Kinase Domain-dasatinib Complex
Length = 279
Score = 65.1 bits (157), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 43/178 (24%), Positives = 89/178 (50%), Gaps = 10/178 (5%)
Query: 54 MQDILHEAAVLYLAQKSERIVGLHEIYETPHEMVLVLEMVPDGELQRLVDIQDG----IP 109
+Q L EA ++ Q +++V L+ + + ++ E + G L + +G +P
Sbjct: 51 VQAFLEEANLMKTLQ-HDKLVRLYAVVTKEEPIYIITEFMAKGSLLDFLKSDEGGKVLLP 109
Query: 110 EQDTRSYMKQILEALAFLHDHNITHLDLKPQNILLTKDNNIKLCDFGISRVVND-VVEVK 168
+ + QI E +A++ N H DL+ N+L+++ K+ DFG++RV+ D +
Sbjct: 110 K--LIDFSAQIAEGMAYIERKNYIHRDLRAANVLVSESLMCKIADFGLARVIEDNEYTAR 167
Query: 169 EIIGTP-DYVAPEVLSYEPISLATDMWSVGVLAYVLLS-SHSPFAGDNKQETFLNISQ 224
E P + APE +++ ++ +++WS G+L Y +++ P+ G + +SQ
Sbjct: 168 EGAKFPIKWTAPEAINFGCFTIKSNVWSFGILLYEIVTYGKIPYPGRTNADVMSALSQ 225
>pdb|1K2P|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Domain
pdb|1K2P|B Chain B, Crystal Structure Of Bruton's Tyrosine Kinase Domain
Length = 263
Score = 65.1 bits (157), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 55/208 (26%), Positives = 97/208 (46%), Gaps = 11/208 (5%)
Query: 22 GKFASVRKCTHKITKVEYAAKFIRKRRRSMDQMQDILHEAAVLYLAQKSERIVGLHEIYE 81
G+F V+ + + + A K I++ S D+ + EA V+ + E++V L+ +
Sbjct: 15 GQFGVVKYGKWR-GQYDVAIKMIKEGSMSEDE---FIEEAKVM-MNLSHEKLVQLYGVCT 69
Query: 82 TPHEMVLVLEMVPDG-ELQRLVDIQDGIPEQDTRSYMKQILEALAFLHDHNITHLDLKPQ 140
+ ++ E + +G L L +++ Q K + EA+ +L H DL +
Sbjct: 70 KQRPIFIITEYMANGCLLNYLREMRHRFQTQQLLEMCKDVCEAMEYLESKQFLHRDLAAR 129
Query: 141 NILLTKDNNIKLCDFGISRVVNDVVEVKEIIGTP---DYVAPEVLSYEPISLATDMWSVG 197
N L+ +K+ DFG+SR V D E +G+ + PEVL Y S +D+W+ G
Sbjct: 130 NCLVNDQGVVKVSDFGLSRYVLD-DEYTSSVGSKFPVRWSPPEVLMYSKFSSKSDIWAFG 188
Query: 198 VLAYVLLS-SHSPFAGDNKQETFLNISQ 224
VL + + S P+ ET +I+Q
Sbjct: 189 VLMWEIYSLGKMPYERFTNSETAEHIAQ 216
>pdb|2JKM|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 65.1 bits (157), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 38/135 (28%), Positives = 72/135 (53%), Gaps = 4/135 (2%)
Query: 82 TPHEMVLVLEMVPDGELQRLVDIQD-GIPEQDTRSYMKQILEALAFLHDHNITHLDLKPQ 140
T + + +++E+ GEL+ + ++ + Y Q+ ALA+L H D+ +
Sbjct: 81 TENPVWIIMELCTLGELRSFLQVRKYSLDLASLILYAYQLSTALAYLESKRFVHRDIAAR 140
Query: 141 NILLTKDNNIKLCDFGISRVVNDVVEVKEIIGT-P-DYVAPEVLSYEPISLATDMWSVGV 198
N+L++ ++ +KL DFG+SR + D K G P ++APE +++ + A+D+W GV
Sbjct: 141 NVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPESINFRRFTSASDVWMFGV 200
Query: 199 LAY-VLLSSHSPFAG 212
+ +L+ PF G
Sbjct: 201 CMWEILMHGVKPFQG 215
>pdb|2J0M|B Chain B, Crystal Structure A Two-Chain Complex Between The Ferm And
Kinase Domains Of Focal Adhesion Kinase.
pdb|2JKQ|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 65.1 bits (157), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 38/135 (28%), Positives = 72/135 (53%), Gaps = 4/135 (2%)
Query: 82 TPHEMVLVLEMVPDGELQRLVDIQD-GIPEQDTRSYMKQILEALAFLHDHNITHLDLKPQ 140
T + + +++E+ GEL+ + ++ + Y Q+ ALA+L H D+ +
Sbjct: 81 TENPVWIIMELCTLGELRSFLQVRKYSLDLASLILYAYQLSTALAYLESKRFVHRDIAAR 140
Query: 141 NILLTKDNNIKLCDFGISRVVNDVVEVKEIIGT-P-DYVAPEVLSYEPISLATDMWSVGV 198
N+L++ ++ +KL DFG+SR + D K G P ++APE +++ + A+D+W GV
Sbjct: 141 NVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPESINFRRFTSASDVWMFGV 200
Query: 199 LAY-VLLSSHSPFAG 212
+ +L+ PF G
Sbjct: 201 CMWEILMHGVKPFQG 215
>pdb|4EBW|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
pdb|4EBV|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
Length = 304
Score = 64.7 bits (156), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 38/135 (28%), Positives = 72/135 (53%), Gaps = 4/135 (2%)
Query: 82 TPHEMVLVLEMVPDGELQRLVDIQD-GIPEQDTRSYMKQILEALAFLHDHNITHLDLKPQ 140
T + + +++E+ GEL+ + ++ + Y Q+ ALA+L H D+ +
Sbjct: 109 TENPVWIIMELCTLGELRSFLQVRKYSLDLASLILYAYQLSTALAYLESKRFVHRDIAAR 168
Query: 141 NILLTKDNNIKLCDFGISRVVNDVVEVKEIIGT-P-DYVAPEVLSYEPISLATDMWSVGV 198
N+L++ ++ +KL DFG+SR + D K G P ++APE +++ + A+D+W GV
Sbjct: 169 NVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPESINFRRFTSASDVWMFGV 228
Query: 199 LAY-VLLSSHSPFAG 212
+ +L+ PF G
Sbjct: 229 CMWEILMHGVKPFQG 243
>pdb|3P08|A Chain A, Crystal Structure Of The Human Btk Kinase Domain
pdb|3P08|B Chain B, Crystal Structure Of The Human Btk Kinase Domain
Length = 267
Score = 64.7 bits (156), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 55/208 (26%), Positives = 97/208 (46%), Gaps = 11/208 (5%)
Query: 22 GKFASVRKCTHKITKVEYAAKFIRKRRRSMDQMQDILHEAAVLYLAQKSERIVGLHEIYE 81
G+F V+ + + + A K I++ S D+ + EA V+ + E++V L+ +
Sbjct: 19 GQFGVVKYGKWR-GQYDVAIKMIKEGSMSEDE---FIEEAKVM-MNLSHEKLVQLYGVCT 73
Query: 82 TPHEMVLVLEMVPDG-ELQRLVDIQDGIPEQDTRSYMKQILEALAFLHDHNITHLDLKPQ 140
+ ++ E + +G L L +++ Q K + EA+ +L H DL +
Sbjct: 74 KQRPIFIITEYMANGCLLNYLREMRHRFQTQQLLEMCKDVCEAMEYLESKQFLHRDLAAR 133
Query: 141 NILLTKDNNIKLCDFGISRVVNDVVEVKEIIGTP---DYVAPEVLSYEPISLATDMWSVG 197
N L+ +K+ DFG+SR V D E +G+ + PEVL Y S +D+W+ G
Sbjct: 134 NCLVNDQGVVKVSDFGLSRYVLD-DEYTSSVGSKFPVRWSPPEVLMYSKFSSKSDIWAFG 192
Query: 198 VLAYVLLS-SHSPFAGDNKQETFLNISQ 224
VL + + S P+ ET +I+Q
Sbjct: 193 VLMWEIYSLGKMPYERFTNSETAEHIAQ 220
>pdb|2ETM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain
Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2ETM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain
Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2IJM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
pdb|2IJM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
Length = 281
Score = 64.7 bits (156), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 38/135 (28%), Positives = 72/135 (53%), Gaps = 4/135 (2%)
Query: 82 TPHEMVLVLEMVPDGELQRLVDIQD-GIPEQDTRSYMKQILEALAFLHDHNITHLDLKPQ 140
T + + +++E+ GEL+ + ++ + Y Q+ ALA+L H D+ +
Sbjct: 83 TENPVWIIMELCTLGELRSFLQVRKYSLDLASLILYAYQLSTALAYLESKRFVHRDIAAR 142
Query: 141 NILLTKDNNIKLCDFGISRVVNDVVEVKEIIGT-P-DYVAPEVLSYEPISLATDMWSVGV 198
N+L++ ++ +KL DFG+SR + D K G P ++APE +++ + A+D+W GV
Sbjct: 143 NVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPESINFRRFTSASDVWMFGV 202
Query: 199 LAY-VLLSSHSPFAG 212
+ +L+ PF G
Sbjct: 203 CMWEILMHGVKPFQG 217
>pdb|3PXK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
pdb|3PXK|B Chain B, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
Length = 282
Score = 64.7 bits (156), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 38/135 (28%), Positives = 72/135 (53%), Gaps = 4/135 (2%)
Query: 82 TPHEMVLVLEMVPDGELQRLVDIQD-GIPEQDTRSYMKQILEALAFLHDHNITHLDLKPQ 140
T + + +++E+ GEL+ + ++ + Y Q+ ALA+L H D+ +
Sbjct: 84 TENPVWIIMELCTLGELRSFLQVRKYSLDLASLILYAYQLSTALAYLESKRFVHRDIAAR 143
Query: 141 NILLTKDNNIKLCDFGISRVVNDVVEVKEIIGT-P-DYVAPEVLSYEPISLATDMWSVGV 198
N+L++ ++ +KL DFG+SR + D K G P ++APE +++ + A+D+W GV
Sbjct: 144 NVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPESINFRRFTSASDVWMFGV 203
Query: 199 LAY-VLLSSHSPFAG 212
+ +L+ PF G
Sbjct: 204 CMWEILMHGVKPFQG 218
>pdb|3BZ3|A Chain A, Crystal Structure Analysis Of Focal Adhesion Kinase With A
Methanesulfonamide Diaminopyrimidine Inhibitor
Length = 276
Score = 64.7 bits (156), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 38/135 (28%), Positives = 72/135 (53%), Gaps = 4/135 (2%)
Query: 82 TPHEMVLVLEMVPDGELQRLVDIQD-GIPEQDTRSYMKQILEALAFLHDHNITHLDLKPQ 140
T + + +++E+ GEL+ + ++ + Y Q+ ALA+L H D+ +
Sbjct: 78 TENPVWIIMELCTLGELRSFLQVRKYSLDLASLILYAYQLSTALAYLESKRFVHRDIAAR 137
Query: 141 NILLTKDNNIKLCDFGISRVVNDVVEVKEIIGT-P-DYVAPEVLSYEPISLATDMWSVGV 198
N+L++ ++ +KL DFG+SR + D K G P ++APE +++ + A+D+W GV
Sbjct: 138 NVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPESINFRRFTSASDVWMFGV 197
Query: 199 LAY-VLLSSHSPFAG 212
+ +L+ PF G
Sbjct: 198 CMWEILMHGVKPFQG 212
>pdb|3GEN|A Chain A, The 1.6 A Crystal Structure Of Human Bruton's Tyrosine
Kinase Bound To A Pyrrolopyrimidine-Containing Compound
Length = 283
Score = 64.7 bits (156), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 55/208 (26%), Positives = 97/208 (46%), Gaps = 11/208 (5%)
Query: 22 GKFASVRKCTHKITKVEYAAKFIRKRRRSMDQMQDILHEAAVLYLAQKSERIVGLHEIYE 81
G+F V+ + + + A K I++ S D+ + EA V+ + E++V L+ +
Sbjct: 35 GQFGVVKYGKWR-GQYDVAIKMIKEGSMSEDE---FIEEAKVM-MNLSHEKLVQLYGVCT 89
Query: 82 TPHEMVLVLEMVPDG-ELQRLVDIQDGIPEQDTRSYMKQILEALAFLHDHNITHLDLKPQ 140
+ ++ E + +G L L +++ Q K + EA+ +L H DL +
Sbjct: 90 KQRPIFIITEYMANGCLLNYLREMRHRFQTQQLLEMCKDVCEAMEYLESKQFLHRDLAAR 149
Query: 141 NILLTKDNNIKLCDFGISRVVNDVVEVKEIIGTP---DYVAPEVLSYEPISLATDMWSVG 197
N L+ +K+ DFG+SR V D E +G+ + PEVL Y S +D+W+ G
Sbjct: 150 NCLVNDQGVVKVSDFGLSRYVLD-DEYTSSVGSKFPVRWSPPEVLMYSKFSSKSDIWAFG 208
Query: 198 VLAYVLLS-SHSPFAGDNKQETFLNISQ 224
VL + + S P+ ET +I+Q
Sbjct: 209 VLMWEIYSLGKMPYERFTNSETAEHIAQ 236
>pdb|1T45|A Chain A, Structural Basis For The Autoinhibition And Sti-571
Inhibition Of C- Kit Tyrosine Kinase
Length = 331
Score = 64.7 bits (156), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 44/143 (30%), Positives = 69/143 (48%), Gaps = 6/143 (4%)
Query: 115 SYMKQILEALAFLHDHNITHLDLKPQNILLTKDNNIKLCDFGISR-VVNDV-VEVKEIIG 172
S+ Q+ + +AFL N H DL +NILLT K+CDFG++R + ND VK
Sbjct: 167 SFSYQVAKGMAFLASKNCIHRDLAARNILLTHGRITKICDFGLARDIKNDSNYVVKGNAR 226
Query: 173 TP-DYVAPEVLSYEPISLATDMWSVGVLAYVLLS-SHSPFAGDNKQETFLNISQCNFSFH 230
P ++APE + + +D+WS G+ + L S SP+ G F + + F
Sbjct: 227 LPVKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSPYPGMPVDSKFYKMIKEGFRML 286
Query: 231 EDLFGHISSQAKDFIQSCLVTDP 253
H ++ D +++C DP
Sbjct: 287 SP--EHAPAEMYDIMKTCWDADP 307
>pdb|3G0E|A Chain A, Kit Kinase Domain In Complex With Sunitinib
Length = 336
Score = 64.7 bits (156), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 44/143 (30%), Positives = 69/143 (48%), Gaps = 6/143 (4%)
Query: 115 SYMKQILEALAFLHDHNITHLDLKPQNILLTKDNNIKLCDFGISR-VVNDV-VEVKEIIG 172
S+ Q+ + +AFL N H DL +NILLT K+CDFG++R + ND VK
Sbjct: 172 SFSYQVAKGMAFLASKNCIHRDLAARNILLTHGRITKICDFGLARDIKNDSNYVVKGNAR 231
Query: 173 TP-DYVAPEVLSYEPISLATDMWSVGVLAYVLLS-SHSPFAGDNKQETFLNISQCNFSFH 230
P ++APE + + +D+WS G+ + L S SP+ G F + + F
Sbjct: 232 LPVKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSPYPGMPVDSKFYKMIKEGFRML 291
Query: 231 EDLFGHISSQAKDFIQSCLVTDP 253
H ++ D +++C DP
Sbjct: 292 SP--EHAPAEMYDIMKTCWDADP 312
>pdb|3G0F|A Chain A, Kit Kinase Domain Mutant D816h In Complex With Sunitinib
pdb|3G0F|B Chain B, Kit Kinase Domain Mutant D816h In Complex With Sunitinib
Length = 336
Score = 64.7 bits (156), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 44/143 (30%), Positives = 69/143 (48%), Gaps = 6/143 (4%)
Query: 115 SYMKQILEALAFLHDHNITHLDLKPQNILLTKDNNIKLCDFGISR-VVNDV-VEVKEIIG 172
S+ Q+ + +AFL N H DL +NILLT K+CDFG++R + ND VK
Sbjct: 172 SFSYQVAKGMAFLASKNCIHRDLAARNILLTHGRITKICDFGLARHIKNDSNYVVKGNAR 231
Query: 173 TP-DYVAPEVLSYEPISLATDMWSVGVLAYVLLS-SHSPFAGDNKQETFLNISQCNFSFH 230
P ++APE + + +D+WS G+ + L S SP+ G F + + F
Sbjct: 232 LPVKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSPYPGMPVDSKFYKMIKEGFRML 291
Query: 231 EDLFGHISSQAKDFIQSCLVTDP 253
H ++ D +++C DP
Sbjct: 292 SP--EHAPAEMYDIMKTCWDADP 312
>pdb|3MPM|A Chain A, Lck Complexed With A Pyrazolopyrimidine
Length = 267
Score = 64.7 bits (156), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 41/159 (25%), Positives = 79/159 (49%), Gaps = 6/159 (3%)
Query: 71 ERIVGLHEIYETPHEMVLVLEMVPDGELQRLVDIQDGIPEQDTR--SYMKQILEALAFLH 128
+R+V L+ + T + ++ E + +G L + GI + QI E +AF+
Sbjct: 64 QRLVRLYAVV-TQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIE 122
Query: 129 DHNITHLDLKPQNILLTKDNNIKLCDFGISRVVND-VVEVKEIIGTP-DYVAPEVLSYEP 186
+ N H +L+ NIL++ + K+ DFG++R++ D +E P + APE ++Y
Sbjct: 123 ERNYIHRNLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFPIKWTAPEAINYGT 182
Query: 187 ISLATDMWSVGV-LAYVLLSSHSPFAGDNKQETFLNISQ 224
++ +D+WS G+ L ++ P+ G E N+ +
Sbjct: 183 FTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLER 221
>pdb|1YVJ|A Chain A, Crystal Structure Of The Jak3 Kinase Domain In Complex
With A Staurosporine Analogue
Length = 290
Score = 64.7 bits (156), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 55/195 (28%), Positives = 89/195 (45%), Gaps = 10/195 (5%)
Query: 20 SRGKFASVRKCTHKITKVEYAAKFIRKR--RRSMDQMQDILHEAAVLYLAQKSERIVGLH 77
+G F SV C + A K+ DQ +D E +L A S+ IV
Sbjct: 16 GKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQREIQILK-ALHSDFIVKYR 74
Query: 78 EIYETPH--EMVLVLEMVPDGELQRLVDIQDG-IPEQDTRSYMKQILEALAFLHDHNITH 134
+ P E+ LV+E +P G L+ + + Y QI + + +L H
Sbjct: 75 GVSYGPGRPELRLVMEYLPSGCLRDFLQRHRARLDASRLLLYSSQICKGMEYLGSRRCVH 134
Query: 135 LDLKPQNILLTKDNNIKLCDFGISRVV---NDVVEVKEIIGTPD-YVAPEVLSYEPISLA 190
DL +NIL+ + ++K+ DFG+++++ D V+E +P + APE LS S
Sbjct: 135 RDLAARNILVESEAHVKIADFGLAKLLPLDKDXXVVREPGQSPIFWYAPESLSDNIFSRQ 194
Query: 191 TDMWSVGVLAYVLLS 205
+D+WS GV+ Y L +
Sbjct: 195 SDVWSFGVVLYELFT 209
>pdb|2J0J|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains
Length = 656
Score = 64.7 bits (156), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 41/145 (28%), Positives = 78/145 (53%), Gaps = 8/145 (5%)
Query: 72 RIVGLHEIYETPHEMVLVLEMVPDGELQRLVDIQD-GIPEQDTRSYMKQILEALAFLHDH 130
+++G+ I E P + +++E+ GEL+ + ++ + Y Q+ ALA+L
Sbjct: 455 KLIGV--ITENP--VWIIMELCTLGELRSFLQVRKFSLDLASLILYAYQLSTALAYLESK 510
Query: 131 NITHLDLKPQNILLTKDNNIKLCDFGISRVVNDVVEVKEIIGT-P-DYVAPEVLSYEPIS 188
H D+ +N+L++ ++ +KL DFG+SR + D K G P ++APE +++ +
Sbjct: 511 RFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPESINFRRFT 570
Query: 189 LATDMWSVGVLAY-VLLSSHSPFAG 212
A+D+W GV + +L+ PF G
Sbjct: 571 SASDVWMFGVCMWEILMHGVKPFQG 595
>pdb|1PKG|A Chain A, Structure Of A C-kit Kinase Product Complex
pdb|1PKG|B Chain B, Structure Of A C-kit Kinase Product Complex
Length = 329
Score = 64.3 bits (155), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 44/143 (30%), Positives = 69/143 (48%), Gaps = 6/143 (4%)
Query: 115 SYMKQILEALAFLHDHNITHLDLKPQNILLTKDNNIKLCDFGISR-VVNDV-VEVKEIIG 172
S+ Q+ + +AFL N H DL +NILLT K+CDFG++R + ND VK
Sbjct: 165 SFSYQVAKGMAFLASKNCIHRDLAARNILLTHGRITKICDFGLARDIKNDSNYVVKGNAR 224
Query: 173 TP-DYVAPEVLSYEPISLATDMWSVGVLAYVLLS-SHSPFAGDNKQETFLNISQCNFSFH 230
P ++APE + + +D+WS G+ + L S SP+ G F + + F
Sbjct: 225 LPVKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSPYPGMPVDSKFYKMIKEGFRML 284
Query: 231 EDLFGHISSQAKDFIQSCLVTDP 253
H ++ D +++C DP
Sbjct: 285 SP--EHAPAEMYDIMKTCWDADP 305
>pdb|1T46|A Chain A, Structural Basis For The Autoinhibition And Sti-571
Inhibition Of C-kit Tyrosine Kinase
Length = 313
Score = 64.3 bits (155), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 44/143 (30%), Positives = 69/143 (48%), Gaps = 6/143 (4%)
Query: 115 SYMKQILEALAFLHDHNITHLDLKPQNILLTKDNNIKLCDFGISR-VVNDV-VEVKEIIG 172
S+ Q+ + +AFL N H DL +NILLT K+CDFG++R + ND VK
Sbjct: 149 SFSYQVAKGMAFLASKNCIHRDLAARNILLTHGRITKICDFGLARDIKNDSNYVVKGNAR 208
Query: 173 TP-DYVAPEVLSYEPISLATDMWSVGVLAYVLLS-SHSPFAGDNKQETFLNISQCNFSFH 230
P ++APE + + +D+WS G+ + L S SP+ G F + + F
Sbjct: 209 LPVKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSPYPGMPVDSKFYKMIKEGFRML 268
Query: 231 EDLFGHISSQAKDFIQSCLVTDP 253
H ++ D +++C DP
Sbjct: 269 SP--EHAPAEMYDIMKTCWDADP 289
>pdb|1ZYC|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|C Chain C, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|D Chain D, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYD|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp.
pdb|1ZYD|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp
Length = 303
Score = 64.3 bits (155), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 58/221 (26%), Positives = 105/221 (47%), Gaps = 35/221 (15%)
Query: 20 SRGKFASVRKCTHKITKVEYAAKFIRKRRRSMDQMQDIL----------HEAAVLYLAQK 69
+G F V K + + YA I+K R + +++ IL H+ V Y A
Sbjct: 15 GQGAFGQVVKARNALDSRYYA---IKKIRHTEEKLSTILSEVMLLASLNHQYVVRYYAAW 71
Query: 70 SERIVGLHEIYETPHEMVLVLEM--VPDGELQRLVDIQDGIPEQDTRSYM-KQILEALAF 126
ER + + + L ++M + L L+ ++ ++D + +QILEAL++
Sbjct: 72 LERRNFVKPMTAVKKKSTLFIQMEYCENRTLYDLIHSENLNQQRDEYWRLFRQILEALSY 131
Query: 127 LHDHNITHLDLKPQNILLTKDNNIKLCDFGISRVVNDVVEVKEI---------------I 171
+H I H DLKP NI + + N+K+ DFG+++ V+ +++ ++ I
Sbjct: 132 IHSQGIIHRDLKPMNIFIDESRNVKIGDFGLAKNVHRSLDILKLDSQNLPGSSDNLTSAI 191
Query: 172 GTPDYVAPEVLSYEP-ISLATDMWSVGVLAYVLLSSHSPFA 211
GT YVA EVL + DM+S+G++ + ++ PF+
Sbjct: 192 GTAMYVATEVLDGTGHYNEKIDMYSLGIIFFEMI---YPFS 229
>pdb|3P1A|A Chain A, Structure Of Human Membrane-Associated Tyrosine- And
Threonine- Specific Cdc2-Inhibitory Kinase Myt1 (Pkmyt1)
Length = 311
Score = 64.3 bits (155), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 61/207 (29%), Positives = 86/207 (41%), Gaps = 22/207 (10%)
Query: 22 GKFASVRKCTHKITKVEYAAKFIRKRRRSMDQMQDILHEAAVLYLAQKSERI------VG 75
G + V K K YA K RSM + A L E++ V
Sbjct: 68 GSYGEVFKVRSKEDGRLYAVK------RSMSPFRGPKDRARKLAEVGSHEKVGQHPCCVR 121
Query: 76 LHEIYETPHEMVLVLEMVPDGELQRLVDIQDGIPEQDTRSYMKQILEALAFLHDHNITHL 135
L + +E + L E+ Q +PE Y++ L ALA LH + HL
Sbjct: 122 LEQAWEEGGILYLQTELCGPSLQQHCEAWGASLPEAQVWGYLRDTLLALAHLHSQGLVHL 181
Query: 136 DLKPQNILLTKDNNIKLCDFG--ISRVVNDVVEVKEIIGTPDYVAPEVL--SYEPISLAT 191
D+KP NI L KL DFG + EV+E G P Y+APE+L SY A
Sbjct: 182 DVKPANIFLGPRGRCKLGDFGLLVELGTAGAGEVQE--GDPRYMAPELLQGSY---GTAA 236
Query: 192 DMWSVGV-LAYVLLSSHSPFAGDNKQE 217
D++S+G+ + V + P G+ Q+
Sbjct: 237 DVFSLGLTILEVACNMELPHGGEGWQQ 263
>pdb|3JUH|A Chain A, Crystal Structure Of A Mutant Of Human Protein Kinase
Ck2alpha With Altered Cosubstrate Specificity
pdb|3JUH|B Chain B, Crystal Structure Of A Mutant Of Human Protein Kinase
Ck2alpha With Altered Cosubstrate Specificity
Length = 335
Score = 64.3 bits (155), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 47/170 (27%), Positives = 88/170 (51%), Gaps = 10/170 (5%)
Query: 73 IVGLHEIYETP--HEMVLVLEMVPDGELQRLVDIQDGIPEQDTRSYMKQILEALAFLHDH 130
I+ L +I + P LV E V + + ++L + + D R YM +IL+AL + H
Sbjct: 94 IITLADIVKDPVSRTPALVFEHVNNTDFKQLYQT---LTDYDIRFYMYEILKALDYCHSM 150
Query: 131 NITHLDLKPQNILLTKDN-NIKLCDFGISRVVNDVVEVKEIIGTPDYVAPEVL-SYEPIS 188
I H D+KP N+L+ ++ ++L D+G++ + E + + + PE+L Y+
Sbjct: 151 GIMHRDVKPHNVLIDHEHRKLRLIDWGLAEFYHPGQEYNVRVASRYFKGPELLVDYQMYD 210
Query: 189 LATDMWSVG-VLAYVLLSSHSPFAGDNKQETFLNISQCNFSFHEDLFGHI 237
+ DMWS+G +LA ++ F G + + + I++ + EDL+ +I
Sbjct: 211 YSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGT--EDLYDYI 258
>pdb|2IWI|A Chain A, Crystal Structure Of The Human Pim2 In Complex With A
Ruthenium Organometallic Ligand Ru1
pdb|2IWI|B Chain B, Crystal Structure Of The Human Pim2 In Complex With A
Ruthenium Organometallic Ligand Ru1
Length = 312
Score = 63.9 bits (154), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 63/245 (25%), Positives = 111/245 (45%), Gaps = 23/245 (9%)
Query: 20 SRGKFASVRKCTHKIT-KVEYAAKFI-RKRRRSMDQMQDILH---EAAVLY---LAQKSE 71
+G F +V H++T +++ A K I R R + D + E A+L+
Sbjct: 40 GKGGFGTVFA-GHRLTDRLQVAIKVIPRNRVLGWSPLSDSVTCPLEVALLWKVGAGGGHP 98
Query: 72 RIVGLHEIYETPHEMVLVLEM-VPDGELQRLVDIQDGIPEQDTRSYMKQILEALAFLHDH 130
++ L + +ET +LVLE +P +L + + + E +R + Q++ A+ H
Sbjct: 99 GVIRLLDWFETQEGFMLVLERPLPAQDLFDYITEKGPLGEGPSRCFFGQVVAAIQHCHSR 158
Query: 131 NITHLDLKPQNILL-TKDNNIKLCDFGISRVVNDVVEVKEIIGTPDYVAPEVLS-YEPIS 188
+ H D+K +NIL+ + KL DFG +++D + GT Y PE +S ++ +
Sbjct: 159 GVVHRDIKDENILIDLRRGCAKLIDFGSGALLHD-EPYTDFDGTRVYSPPEWISRHQYHA 217
Query: 189 LATDMWSVGVLAYVLLSSHSPFAGDNKQETFLNISQCNFSFHEDLFGHISSQAKDFIQSC 248
L +WS+G+L Y ++ PF D + I + F H+S I+ C
Sbjct: 218 LPATVWSLGILLYDMVCGDIPFERDQE------ILEAELHFP----AHVSPDCCALIRRC 267
Query: 249 LVTDP 253
L P
Sbjct: 268 LAPKP 272
>pdb|4DGL|C Chain C, Crystal Structure Of The Ck2 Tetrameric Holoenzyme
pdb|4DGL|D Chain D, Crystal Structure Of The Ck2 Tetrameric Holoenzyme
Length = 335
Score = 63.9 bits (154), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 46/170 (27%), Positives = 89/170 (52%), Gaps = 10/170 (5%)
Query: 73 IVGLHEIYETP--HEMVLVLEMVPDGELQRLVDIQDGIPEQDTRSYMKQILEALAFLHDH 130
I+ L +I + P LV E V + + ++L + + + D R YM +IL+AL + H
Sbjct: 94 IITLADIVKDPVSRTPALVFEHVNNTDFKQL---RQTLTDYDIRFYMYEILKALDYCHSM 150
Query: 131 NITHLDLKPQNILLTKDN-NIKLCDFGISRVVNDVVEVKEIIGTPDYVAPEVL-SYEPIS 188
I H D+KP N+++ ++ ++L D+G++ + E + + + PE+L Y+
Sbjct: 151 GIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQEYNVRVASRYFKGPELLVDYQMYD 210
Query: 189 LATDMWSVG-VLAYVLLSSHSPFAGDNKQETFLNISQCNFSFHEDLFGHI 237
+ DMWS+G +LA ++ F G + + + I++ + EDL+ +I
Sbjct: 211 YSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGT--EDLYDYI 258
>pdb|3LXK|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXL|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 327
Score = 63.9 bits (154), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 54/195 (27%), Positives = 88/195 (45%), Gaps = 10/195 (5%)
Query: 20 SRGKFASVRKCTHKITKVEYAAKFIRKR--RRSMDQMQDILHEAAVLYLAQKSERIVGLH 77
+G F SV C + A K+ DQ +D E +L A S+ IV
Sbjct: 32 GKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQREIQILK-ALHSDFIVKYR 90
Query: 78 EIYETP--HEMVLVLEMVPDGELQRLVDIQDG-IPEQDTRSYMKQILEALAFLHDHNITH 134
+ P + LV+E +P G L+ + + Y QI + + +L H
Sbjct: 91 GVSYGPGRQSLRLVMEYLPSGCLRDFLQRHRARLDASRLLLYSSQICKGMEYLGSRRCVH 150
Query: 135 LDLKPQNILLTKDNNIKLCDFGISRVV---NDVVEVKEIIGTPD-YVAPEVLSYEPISLA 190
DL +NIL+ + ++K+ DFG+++++ D V+E +P + APE LS S
Sbjct: 151 RDLAARNILVESEAHVKIADFGLAKLLPLDKDYYVVREPGQSPIFWYAPESLSDNIFSRQ 210
Query: 191 TDMWSVGVLAYVLLS 205
+D+WS GV+ Y L +
Sbjct: 211 SDVWSFGVVLYELFT 225
>pdb|4HVD|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-1,2,2-trimethyl-propyl)-amide
pdb|4HVG|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-2-hydroxy-1,2-dimethyl-propyl)- Amide
pdb|4HVH|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-2-hydroxy-1,2-dimethyl-propyl
pdb|4HVI|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-1-methyl-2-oxo-2-piperidin-1-yl- Ethyl)-amide
Length = 314
Score = 63.9 bits (154), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 54/195 (27%), Positives = 88/195 (45%), Gaps = 10/195 (5%)
Query: 20 SRGKFASVRKCTHKITKVEYAAKFIRKR--RRSMDQMQDILHEAAVLYLAQKSERIVGLH 77
+G F SV C + A K+ DQ +D E +L A S+ IV
Sbjct: 19 GKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQREIQILK-ALHSDFIVKYR 77
Query: 78 EIYETP--HEMVLVLEMVPDGELQRLVDIQDG-IPEQDTRSYMKQILEALAFLHDHNITH 134
+ P + LV+E +P G L+ + + Y QI + + +L H
Sbjct: 78 GVSYGPGRQSLRLVMEYLPSGCLRDFLQRHRARLDASRLLLYSSQICKGMEYLGSRRCVH 137
Query: 135 LDLKPQNILLTKDNNIKLCDFGISRVV---NDVVEVKEIIGTPD-YVAPEVLSYEPISLA 190
DL +NIL+ + ++K+ DFG+++++ D V+E +P + APE LS S
Sbjct: 138 RDLAARNILVESEAHVKIADFGLAKLLPLDKDYYVVREPGQSPIFWYAPESLSDNIFSRQ 197
Query: 191 TDMWSVGVLAYVLLS 205
+D+WS GV+ Y L +
Sbjct: 198 SDVWSFGVVLYELFT 212
>pdb|3PJC|A Chain A, Crystal Structure Of Jak3 Complexed With A Potent Atp Site
Inhibitor Showing High Selectivity Within The Janus
Kinase Family
Length = 315
Score = 63.9 bits (154), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 54/195 (27%), Positives = 88/195 (45%), Gaps = 10/195 (5%)
Query: 20 SRGKFASVRKCTHKITKVEYAAKFIRKR--RRSMDQMQDILHEAAVLYLAQKSERIVGLH 77
+G F SV C + A K+ DQ +D E +L A S+ IV
Sbjct: 20 GKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQREIQILK-ALHSDFIVKYR 78
Query: 78 EIYETP--HEMVLVLEMVPDGELQRLVDIQDG-IPEQDTRSYMKQILEALAFLHDHNITH 134
+ P + LV+E +P G L+ + + Y QI + + +L H
Sbjct: 79 GVSYGPGRQSLRLVMEYLPSGCLRDFLQRHRARLDASRLLLYSSQICKGMEYLGSRRCVH 138
Query: 135 LDLKPQNILLTKDNNIKLCDFGISRVV---NDVVEVKEIIGTPD-YVAPEVLSYEPISLA 190
DL +NIL+ + ++K+ DFG+++++ D V+E +P + APE LS S
Sbjct: 139 RDLAARNILVESEAHVKIADFGLAKLLPLDKDYYVVREPGQSPIFWYAPESLSDNIFSRQ 198
Query: 191 TDMWSVGVLAYVLLS 205
+D+WS GV+ Y L +
Sbjct: 199 SDVWSFGVVLYELFT 213
>pdb|2JKK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
pdb|2JKO|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 63.9 bits (154), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 38/135 (28%), Positives = 71/135 (52%), Gaps = 4/135 (2%)
Query: 82 TPHEMVLVLEMVPDGELQRLVDIQD-GIPEQDTRSYMKQILEALAFLHDHNITHLDLKPQ 140
T + + +++E+ GEL+ + ++ + Y Q+ ALA+L H D+ +
Sbjct: 81 TENPVWIIMELCTLGELRSFLQVRKFSLDLASLILYAYQLSTALAYLESKRFVHRDIAAR 140
Query: 141 NILLTKDNNIKLCDFGISRVVNDVVEVKEIIGT-P-DYVAPEVLSYEPISLATDMWSVGV 198
N+L++ + +KL DFG+SR + D K G P ++APE +++ + A+D+W GV
Sbjct: 141 NVLVSATDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPESINFRRFTSASDVWMFGV 200
Query: 199 LAY-VLLSSHSPFAG 212
+ +L+ PF G
Sbjct: 201 CMWEILMHGVKPFQG 215
>pdb|3BQC|A Chain A, High Ph-Value Crystal Structure Of Emodin In Complex With
The Catalytic Subunit Of Protein Kinase Ck2
pdb|3C13|A Chain A, Low Ph-Value Crystal Structure Of Emodin In Complex With
The Catalytic Subunit Of Protein Kinase Ck2
pdb|3FWQ|A Chain A, Inactive Conformation Of Human Protein Kinase Ck2
Catalytic Subunit
pdb|3FWQ|B Chain B, Inactive Conformation Of Human Protein Kinase Ck2
Catalytic Subunit
pdb|3RPS|A Chain A, Structure Of Human Ck2alpha In Complex With The
Atp-Competitive Inhibitor
3-(4,5,6,7-Tetrabromo-1h-Benzotriazol-1-Yl)propan-1-Ol
pdb|3RPS|B Chain B, Structure Of Human Ck2alpha In Complex With The
Atp-Competitive Inhibitor
3-(4,5,6,7-Tetrabromo-1h-Benzotriazol-1-Yl)propan-1-Ol
pdb|3U9C|A Chain A, Structure Of A C-terminal Deletion Mutant Of Human Protein
Kinase Ck2 Catalytic Subunit With The Atp-competitive
Inhibitor Resorufin
pdb|3U9C|B Chain B, Structure Of A C-terminal Deletion Mutant Of Human Protein
Kinase Ck2 Catalytic Subunit With The Atp-competitive
Inhibitor Resorufin
pdb|4FBX|A Chain A, Complex Structure Of Human Protein Kinase Ck2 Catalytic
Subunit Crystallized In The Presence Of A Bisubstrate
Inhibitor
Length = 335
Score = 63.9 bits (154), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 46/170 (27%), Positives = 88/170 (51%), Gaps = 10/170 (5%)
Query: 73 IVGLHEIYETP--HEMVLVLEMVPDGELQRLVDIQDGIPEQDTRSYMKQILEALAFLHDH 130
I+ L +I + P LV E V + + ++L + + D R YM +IL+AL + H
Sbjct: 94 IITLADIVKDPVSRTPALVFEHVNNTDFKQLYQT---LTDYDIRFYMYEILKALDYCHSM 150
Query: 131 NITHLDLKPQNILLTKDN-NIKLCDFGISRVVNDVVEVKEIIGTPDYVAPEVL-SYEPIS 188
I H D+KP N+++ ++ ++L D+G++ + E + + + PE+L Y+
Sbjct: 151 GIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQEYNVRVASRYFKGPELLVDYQMYD 210
Query: 189 LATDMWSVG-VLAYVLLSSHSPFAGDNKQETFLNISQCNFSFHEDLFGHI 237
+ DMWS+G +LA ++ F G + + + I++ + EDL+ +I
Sbjct: 211 YSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGT--EDLYDYI 258
>pdb|2I6L|A Chain A, Crystal Structure Of Human Mitogen Activated Protein
Kinase 6 (Mapk6)
pdb|2I6L|B Chain B, Crystal Structure Of Human Mitogen Activated Protein
Kinase 6 (Mapk6)
Length = 320
Score = 63.5 bits (153), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 42/134 (31%), Positives = 72/134 (53%), Gaps = 6/134 (4%)
Query: 105 QDGIPEQDTRSYMKQILEALAFLHDHNITHLDLKPQNILL-TKDNNIKLCDFGISRVVND 163
Q + E+ R +M Q+L L ++H N+ H DLKP N+ + T+D +K+ DFG++R+++
Sbjct: 114 QGPLLEEHARLFMYQLLRGLKYIHSANVLHRDLKPANLFINTEDLVLKIGDFGLARIMDP 173
Query: 164 VVEVK----EIIGTPDYVAPE-VLSYEPISLATDMWSVGVLAYVLLSSHSPFAGDNKQET 218
K E + T Y +P +LS + A DMW+ G + +L+ + FAG ++ E
Sbjct: 174 HYSHKGHLSEGLVTKWYRSPRLLLSPNNYTKAIDMWAAGCIFAEMLTGKTLFAGAHELEQ 233
Query: 219 FLNISQCNFSFHED 232
I + HE+
Sbjct: 234 MQLILESIPVVHEE 247
>pdb|3H30|A Chain A, Crystal Structure Of The Catalytic Subunit Of Human
Protein Kinase Ck2 With 5,6-Dichloro-1-Beta-D-
Ribofuranosylbenzimidazole
pdb|3H30|B Chain B, Crystal Structure Of The Catalytic Subunit Of Human
Protein Kinase Ck2 With 5,6-Dichloro-1-Beta-D-
Ribofuranosylbenzimidazole
Length = 334
Score = 63.5 bits (153), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 46/170 (27%), Positives = 88/170 (51%), Gaps = 10/170 (5%)
Query: 73 IVGLHEIYETP--HEMVLVLEMVPDGELQRLVDIQDGIPEQDTRSYMKQILEALAFLHDH 130
I+ L +I + P LV E V + + ++L + + D R YM +IL+AL + H
Sbjct: 94 IITLADIVKDPVSRTPALVFEHVNNTDFKQLYQT---LTDYDIRFYMYEILKALDYCHSM 150
Query: 131 NITHLDLKPQNILLTKDN-NIKLCDFGISRVVNDVVEVKEIIGTPDYVAPEVL-SYEPIS 188
I H D+KP N+++ ++ ++L D+G++ + E + + + PE+L Y+
Sbjct: 151 GIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQEYNVRVASRYFKGPELLVDYQMYD 210
Query: 189 LATDMWSVG-VLAYVLLSSHSPFAGDNKQETFLNISQCNFSFHEDLFGHI 237
+ DMWS+G +LA ++ F G + + + I++ + EDL+ +I
Sbjct: 211 YSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGT--EDLYDYI 258
>pdb|2R7I|A Chain A, Crystal Structure Of Catalytic Subunit Of Protein Kinase
Ck2
pdb|2R7I|B Chain B, Crystal Structure Of Catalytic Subunit Of Protein Kinase
Ck2
pdb|2R7I|C Chain C, Crystal Structure Of Catalytic Subunit Of Protein Kinase
Ck2
pdb|2R7I|D Chain D, Crystal Structure Of Catalytic Subunit Of Protein Kinase
Ck2
Length = 335
Score = 63.5 bits (153), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 46/170 (27%), Positives = 88/170 (51%), Gaps = 10/170 (5%)
Query: 73 IVGLHEIYETP--HEMVLVLEMVPDGELQRLVDIQDGIPEQDTRSYMKQILEALAFLHDH 130
I+ L +I + P LV E V + + ++L + + D R YM +IL+AL + H
Sbjct: 94 IITLADIVKDPVSRTPALVFEHVNNTDFKQLYQT---LTDYDIRFYMYEILKALDYCHSM 150
Query: 131 NITHLDLKPQNILLTKDN-NIKLCDFGISRVVNDVVEVKEIIGTPDYVAPEVL-SYEPIS 188
I H D+KP N+++ ++ ++L D+G++ + E + + + PE+L Y+
Sbjct: 151 GIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQEYNVRVASRYFKGPELLVDYQMYD 210
Query: 189 LATDMWSVG-VLAYVLLSSHSPFAGDNKQETFLNISQCNFSFHEDLFGHI 237
+ DMWS+G +LA ++ F G + + + I++ + EDL+ +I
Sbjct: 211 YSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGT--EDLYDYI 258
>pdb|1PJK|A Chain A, Crystal Structure Of A C-terminal Deletion Mutant Of Human
Protein Kinase Ck2 Catalytic Subunit
pdb|2PVR|A Chain A, Crystal Structure Of The Catalytic Subunit Of Protein
Kinase Ck2 (c- Terminal Deletion Mutant 1-335) In
Complex With Two Sulfate Ions
Length = 334
Score = 63.5 bits (153), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 46/170 (27%), Positives = 88/170 (51%), Gaps = 10/170 (5%)
Query: 73 IVGLHEIYETP--HEMVLVLEMVPDGELQRLVDIQDGIPEQDTRSYMKQILEALAFLHDH 130
I+ L +I + P LV E V + + ++L + + D R YM +IL+AL + H
Sbjct: 93 IITLADIVKDPVSRTPALVFEHVNNTDFKQLYQT---LTDYDIRFYMYEILKALDYCHSM 149
Query: 131 NITHLDLKPQNILLTKDN-NIKLCDFGISRVVNDVVEVKEIIGTPDYVAPEVL-SYEPIS 188
I H D+KP N+++ ++ ++L D+G++ + E + + + PE+L Y+
Sbjct: 150 GIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQEYNVRVASRYFKGPELLVDYQMYD 209
Query: 189 LATDMWSVG-VLAYVLLSSHSPFAGDNKQETFLNISQCNFSFHEDLFGHI 237
+ DMWS+G +LA ++ F G + + + I++ + EDL+ +I
Sbjct: 210 YSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGT--EDLYDYI 257
>pdb|3NGA|A Chain A, Human Ck2 Catalytic Domain In Complex With Cx-4945
pdb|3NGA|B Chain B, Human Ck2 Catalytic Domain In Complex With Cx-4945
pdb|3U4U|A Chain A, Casein Kinase 2 In Complex With Az-Inhibitor
Length = 333
Score = 63.5 bits (153), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 46/170 (27%), Positives = 88/170 (51%), Gaps = 10/170 (5%)
Query: 73 IVGLHEIYETP--HEMVLVLEMVPDGELQRLVDIQDGIPEQDTRSYMKQILEALAFLHDH 130
I+ L +I + P LV E V + + ++L + + D R YM +IL+AL + H
Sbjct: 94 IITLADIVKDPVSRTPALVFEHVNNTDFKQLYQT---LTDYDIRFYMYEILKALDYCHSM 150
Query: 131 NITHLDLKPQNILLTKDN-NIKLCDFGISRVVNDVVEVKEIIGTPDYVAPEVL-SYEPIS 188
I H D+KP N+++ ++ ++L D+G++ + E + + + PE+L Y+
Sbjct: 151 GIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQEYNVRVASRYFKGPELLVDYQMYD 210
Query: 189 LATDMWSVG-VLAYVLLSSHSPFAGDNKQETFLNISQCNFSFHEDLFGHI 237
+ DMWS+G +LA ++ F G + + + I++ + EDL+ +I
Sbjct: 211 YSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGT--EDLYDYI 258
>pdb|3Q9W|A Chain A, Crystal Structure Of Human Ck2 Alpha In Complex With
Emodin At Ph 8.5
pdb|3Q9X|A Chain A, Crystal Structure Of Human Ck2 Alpha In Complex With
Emodin At Ph 6.5
pdb|3Q9X|B Chain B, Crystal Structure Of Human Ck2 Alpha In Complex With
Emodin At Ph 6.5
pdb|3Q9Y|A Chain A, Crystal Structure Of Human Ck2 Alpha In Complex With
Quinalizarin At Ph 8.5
pdb|3Q9Z|A Chain A, Crystal Structure Of Human Ck2 Alpha In Complex With
Quinalizarin At Ph 6.5
pdb|3Q9Z|B Chain B, Crystal Structure Of Human Ck2 Alpha In Complex With
Quinalizarin At Ph 6.5
pdb|3QA0|A Chain A, Crystal Structure Of The Apo-Form Of Human Ck2 Alpha At Ph
6.5
pdb|3QA0|B Chain B, Crystal Structure Of The Apo-Form Of Human Ck2 Alpha At Ph
6.5
Length = 336
Score = 63.5 bits (153), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 46/170 (27%), Positives = 88/170 (51%), Gaps = 10/170 (5%)
Query: 73 IVGLHEIYETP--HEMVLVLEMVPDGELQRLVDIQDGIPEQDTRSYMKQILEALAFLHDH 130
I+ L +I + P LV E V + + ++L + + D R YM +IL+AL + H
Sbjct: 94 IITLADIVKDPVSRTPALVFEHVNNTDFKQLYQT---LTDYDIRFYMYEILKALDYCHSM 150
Query: 131 NITHLDLKPQNILLTKDN-NIKLCDFGISRVVNDVVEVKEIIGTPDYVAPEVL-SYEPIS 188
I H D+KP N+++ ++ ++L D+G++ + E + + + PE+L Y+
Sbjct: 151 GIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQEYNVRVASRYFKGPELLVDYQMYD 210
Query: 189 LATDMWSVG-VLAYVLLSSHSPFAGDNKQETFLNISQCNFSFHEDLFGHI 237
+ DMWS+G +LA ++ F G + + + I++ + EDL+ +I
Sbjct: 211 YSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGT--EDLYDYI 258
>pdb|4E1Z|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole
Inhibitor
Length = 291
Score = 63.5 bits (153), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 48/162 (29%), Positives = 75/162 (46%), Gaps = 28/162 (17%)
Query: 88 LVLEMVPDGELQRLVDIQDGIPEQ-----DTRSYMKQILEALAFLHDHNITHLDLKPQNI 142
LV+E VP G L+ D +P + +QI E +A+LH + H L +N+
Sbjct: 90 LVMEYVPLGSLR------DYLPRHCVGLAQLLLFAQQICEGMAYLHAQHYIHRALAARNV 143
Query: 143 LLTKDNNIKLCDFGISRVV---NDVVEVKEIIGTPD-YVAPEVLSYEPISLATDMWSVGV 198
LL D +K+ DFG+++ V ++ V+E +P + APE L A+D+WS GV
Sbjct: 144 LLDNDRLVKIGDFGLAKAVPEGHEYYRVREDGDSPVFWYAPECLKECKFYYASDVWSFGV 203
Query: 199 LAYVLLSSHSPFAGDNKQETFLNISQCNFSFHEDLFGHISSQ 240
Y LL T+ + +Q + +L GH Q
Sbjct: 204 TLYELL-------------TYCDSNQSPHTKFTELIGHTQGQ 232
>pdb|1JWH|A Chain A, Crystal Structure Of Human Protein Kinase Ck2 Holoenzyme
pdb|1JWH|B Chain B, Crystal Structure Of Human Protein Kinase Ck2 Holoenzyme
pdb|3PE1|A Chain A, Crystal Structure Of Human Protein Kinase Ck2 Alpha
Subunit In Complex With The Inhibitor Cx-4945
pdb|3PE2|A Chain A, Crystal Structure Of Human Protein Kinase Ck2 In Complex
With The Inhibitor Cx-5011
pdb|3R0T|A Chain A, Crystal Structure Of Human Protein Kinase Ck2 Alpha
Subunit In Complex With The Inhibitor Cx-5279
Length = 337
Score = 63.5 bits (153), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 46/170 (27%), Positives = 88/170 (51%), Gaps = 10/170 (5%)
Query: 73 IVGLHEIYETP--HEMVLVLEMVPDGELQRLVDIQDGIPEQDTRSYMKQILEALAFLHDH 130
I+ L +I + P LV E V + + ++L + + D R YM +IL+AL + H
Sbjct: 94 IITLADIVKDPVSRTPALVFEHVNNTDFKQLYQT---LTDYDIRFYMYEILKALDYCHSM 150
Query: 131 NITHLDLKPQNILLTKDN-NIKLCDFGISRVVNDVVEVKEIIGTPDYVAPEVL-SYEPIS 188
I H D+KP N+++ ++ ++L D+G++ + E + + + PE+L Y+
Sbjct: 151 GIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQEYNVRVASRYFKGPELLVDYQMYD 210
Query: 189 LATDMWSVG-VLAYVLLSSHSPFAGDNKQETFLNISQCNFSFHEDLFGHI 237
+ DMWS+G +LA ++ F G + + + I++ + EDL+ +I
Sbjct: 211 YSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGT--EDLYDYI 258
>pdb|3MB6|A Chain A, Human Ck2 Catalytic Domain In Complex With A Difurane
Derivative Inhibitor (Cpa)
pdb|3MB7|A Chain A, Human Ck2 Catalytic Domain In Complex With A Difurane
Derivative Inhibitor (Amr)
pdb|3OWJ|A Chain A, Human Ck2 Catalytic Domain In Complex With A
Pyridocarbazole Derivative Inhibitor
pdb|3OWK|A Chain A, Human Ck2 Catalytic Domain In Complex With A
Benzopyridoindole Derivative Inhibitor
pdb|3OWL|A Chain A, Human Ck2 Catalytic Domain In Complex With A
Benzopyridoindole Derivative Inhibitor
Length = 331
Score = 63.5 bits (153), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 46/170 (27%), Positives = 88/170 (51%), Gaps = 10/170 (5%)
Query: 73 IVGLHEIYETP--HEMVLVLEMVPDGELQRLVDIQDGIPEQDTRSYMKQILEALAFLHDH 130
I+ L +I + P LV E V + + ++L + + D R YM +IL+AL + H
Sbjct: 94 IITLADIVKDPVSRTPALVFEHVNNTDFKQLYQT---LTDYDIRFYMYEILKALDYCHSM 150
Query: 131 NITHLDLKPQNILLTKDN-NIKLCDFGISRVVNDVVEVKEIIGTPDYVAPEVL-SYEPIS 188
I H D+KP N+++ ++ ++L D+G++ + E + + + PE+L Y+
Sbjct: 151 GIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQEYNVRVASRYFKGPELLVDYQMYD 210
Query: 189 LATDMWSVG-VLAYVLLSSHSPFAGDNKQETFLNISQCNFSFHEDLFGHI 237
+ DMWS+G +LA ++ F G + + + I++ + EDL+ +I
Sbjct: 211 YSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGT--EDLYDYI 258
>pdb|4E20|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole
Inhibitor
Length = 290
Score = 63.5 bits (153), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 48/162 (29%), Positives = 75/162 (46%), Gaps = 28/162 (17%)
Query: 88 LVLEMVPDGELQRLVDIQDGIPEQ-----DTRSYMKQILEALAFLHDHNITHLDLKPQNI 142
LV+E VP G L+ D +P + +QI E +A+LH + H L +N+
Sbjct: 89 LVMEYVPLGSLR------DYLPRHCVGLAQLLLFAQQICEGMAYLHAQHYIHRALAARNV 142
Query: 143 LLTKDNNIKLCDFGISRVV---NDVVEVKEIIGTPD-YVAPEVLSYEPISLATDMWSVGV 198
LL D +K+ DFG+++ V ++ V+E +P + APE L A+D+WS GV
Sbjct: 143 LLDNDRLVKIGDFGLAKAVPEGHEYYRVREDGDSPVFWYAPECLKECKFYYASDVWSFGV 202
Query: 199 LAYVLLSSHSPFAGDNKQETFLNISQCNFSFHEDLFGHISSQ 240
Y LL T+ + +Q + +L GH Q
Sbjct: 203 TLYELL-------------TYCDSNQSPHTKFTELIGHTQGQ 231
>pdb|3NSZ|A Chain A, Human Ck2 Catalytic Domain In Complex With Amppn
Length = 330
Score = 63.5 bits (153), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 46/170 (27%), Positives = 88/170 (51%), Gaps = 10/170 (5%)
Query: 73 IVGLHEIYETP--HEMVLVLEMVPDGELQRLVDIQDGIPEQDTRSYMKQILEALAFLHDH 130
I+ L +I + P LV E V + + ++L + + D R YM +IL+AL + H
Sbjct: 93 IITLADIVKDPVSRTPALVFEHVNNTDFKQLYQT---LTDYDIRFYMYEILKALDYCHSM 149
Query: 131 NITHLDLKPQNILLTKDN-NIKLCDFGISRVVNDVVEVKEIIGTPDYVAPEVL-SYEPIS 188
I H D+KP N+++ ++ ++L D+G++ + E + + + PE+L Y+
Sbjct: 150 GIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQEYNVRVASRYFKGPELLVDYQMYD 209
Query: 189 LATDMWSVG-VLAYVLLSSHSPFAGDNKQETFLNISQCNFSFHEDLFGHI 237
+ DMWS+G +LA ++ F G + + + I++ + EDL+ +I
Sbjct: 210 YSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGT--EDLYDYI 257
>pdb|2J0K|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains.
pdb|2J0K|B Chain B, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains
Length = 656
Score = 63.5 bits (153), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 41/145 (28%), Positives = 77/145 (53%), Gaps = 8/145 (5%)
Query: 72 RIVGLHEIYETPHEMVLVLEMVPDGELQRLVDIQD-GIPEQDTRSYMKQILEALAFLHDH 130
+++G+ I E P + +++E+ GEL+ + ++ + Y Q+ ALA+L
Sbjct: 455 KLIGV--ITENP--VWIIMELCTLGELRSFLQVRKFSLDLASLILYAYQLSTALAYLESK 510
Query: 131 NITHLDLKPQNILLTKDNNIKLCDFGISRVVNDVVEVKEIIGT-P-DYVAPEVLSYEPIS 188
H D+ +N+L++ + +KL DFG+SR + D K G P ++APE +++ +
Sbjct: 511 RFVHRDIAARNVLVSATDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPESINFRRFT 570
Query: 189 LATDMWSVGVLAY-VLLSSHSPFAG 212
A+D+W GV + +L+ PF G
Sbjct: 571 SASDVWMFGVCMWEILMHGVKPFQG 595
>pdb|3Q04|A Chain A, Crystal Structure Of The Apo-Form Of Human Ck2 Alpha At Ph
8.5
Length = 328
Score = 63.5 bits (153), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 46/172 (26%), Positives = 88/172 (51%), Gaps = 10/172 (5%)
Query: 73 IVGLHEIYETP--HEMVLVLEMVPDGELQRLVDIQDGIPEQDTRSYMKQILEALAFLHDH 130
I+ L +I + P LV E V + + ++L + + D R YM +IL+AL + H
Sbjct: 92 IITLADIVKDPVSRTPALVFEHVNNTDFKQLYQT---LTDYDIRFYMYEILKALDYCHSM 148
Query: 131 NITHLDLKPQNILLTKDN-NIKLCDFGISRVVNDVVEVKEIIGTPDYVAPEVL-SYEPIS 188
I H D+KP N+++ ++ ++L D+G++ + E + + + PE+L Y+
Sbjct: 149 GIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQEYNVRVASRYFKGPELLVDYQMYD 208
Query: 189 LATDMWSVG-VLAYVLLSSHSPFAGDNKQETFLNISQCNFSFHEDLFGHISS 239
+ DMWS+G +LA ++ F G + + + I++ + EDL+ +I
Sbjct: 209 YSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGT--EDLYDYIDK 258
>pdb|3U87|A Chain A, Structure Of A Chimeric Construct Of Human Ck2alpha And
Human Ck2alpha' In Complex With A Non-hydrolysable
Atp-analogue
pdb|3U87|B Chain B, Structure Of A Chimeric Construct Of Human Ck2alpha And
Human Ck2alpha' In Complex With A Non-hydrolysable
Atp-analogue
Length = 349
Score = 63.5 bits (153), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 46/170 (27%), Positives = 88/170 (51%), Gaps = 10/170 (5%)
Query: 73 IVGLHEIYETP--HEMVLVLEMVPDGELQRLVDIQDGIPEQDTRSYMKQILEALAFLHDH 130
I+ L +I + P LV E V + + ++L + + D R YM +IL+AL + H
Sbjct: 94 IITLADIVKDPVSRTPALVFEHVNNTDFKQLYQT---LTDYDIRFYMYEILKALDYCHSM 150
Query: 131 NITHLDLKPQNILLTKDN-NIKLCDFGISRVVNDVVEVKEIIGTPDYVAPEVL-SYEPIS 188
I H D+KP N+++ ++ ++L D+G++ + E + + + PE+L Y+
Sbjct: 151 GIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQEYNVRVASRYFKGPELLVDYQMYD 210
Query: 189 LATDMWSVG-VLAYVLLSSHSPFAGDNKQETFLNISQCNFSFHEDLFGHI 237
+ DMWS+G +LA ++ F G + + + I++ + EDL+ +I
Sbjct: 211 YSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGT--EDLYDYI 258
>pdb|3EYG|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3EYH|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 290
Score = 63.5 bits (153), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 47/188 (25%), Positives = 86/188 (45%), Gaps = 18/188 (9%)
Query: 33 KITKVEYAAKFIRKRRRSMDQMQDILHEAAVLYLAQKSERIVGLHEIYETPHEMVLVLEM 92
K K E I ++ ++ ++++ HE V Y +E + + + L++E
Sbjct: 44 KSLKPESGGNHIADLKKEIEILRNLYHENIVKYKGICTE---------DGGNGIKLIMEF 94
Query: 93 VPDGELQR-LVDIQDGIPEQDTRSYMKQILEALAFLHDHNITHLDLKPQNILLTKDNNIK 151
+P G L+ L ++ I + Y QI + + +L H DL +N+L+ ++ +K
Sbjct: 95 LPSGSLKEYLPKNKNKINLKQQLKYAVQICKGMDYLGSRQYVHRDLAARNVLVESEHQVK 154
Query: 152 LCDFGISRVVNDVVEVKEIIGTPD----YVAPEVLSYEPISLATDMWSVGVLAYVLL--- 204
+ DFG+++ + E + D + APE L +A+D+WS GV + LL
Sbjct: 155 IGDFGLTKAIETDKEXXTVKDDRDSPVFWYAPECLMQSKFYIASDVWSFGVTLHELLTYC 214
Query: 205 -SSHSPFA 211
S SP A
Sbjct: 215 DSDSSPMA 222
>pdb|3SAY|A Chain A, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta
(Gsk3b) In Complex With Inhibitor 142
pdb|3SAY|B Chain B, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta
(Gsk3b) In Complex With Inhibitor 142
Length = 430
Score = 63.2 bits (152), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 37/109 (33%), Positives = 56/109 (51%), Gaps = 2/109 (1%)
Query: 116 YMKQILEALAFLHDHNITHLDLKPQNILLTKDNNI-KLCDFGISRVVNDVVEVKEIIGTP 174
YM Q+ +LA++H I H D+KPQN+LL D + KLCDFG ++ + I +
Sbjct: 161 YMYQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSR 220
Query: 175 DYVAPE-VLSYEPISLATDMWSVGVLAYVLLSSHSPFAGDNKQETFLNI 222
Y APE + + + D+WS G + LL F GD+ + + I
Sbjct: 221 YYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEI 269
>pdb|2ZJW|A Chain A, Crystal Structure Of Human Ck2 Alpha Complexed With
Ellagic Acid
pdb|3AMY|A Chain A, Crystal Structure Of Human Ck2 Alpha Complexed With
Apigenin
pdb|3AT2|A Chain A, Crystal Structure Of Ck2alpha
pdb|3AT3|A Chain A, Crystal Structure Of Ck2alpha With Pyradine Derivative
pdb|3AT4|A Chain A, Crystal Structure Of Ck2alpha With Pyradine Derivertive
pdb|3AXW|A Chain A, Crystal Structure Of Human Ck2alpha Complexed With A
Potent Inhibitor
Length = 340
Score = 63.2 bits (152), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 46/170 (27%), Positives = 88/170 (51%), Gaps = 10/170 (5%)
Query: 73 IVGLHEIYETP--HEMVLVLEMVPDGELQRLVDIQDGIPEQDTRSYMKQILEALAFLHDH 130
I+ L +I + P LV E V + + ++L + + D R YM +IL+AL + H
Sbjct: 99 IITLADIVKDPVSRTPALVFEHVNNTDFKQLYQT---LTDYDIRFYMYEILKALDYCHSM 155
Query: 131 NITHLDLKPQNILLTKDN-NIKLCDFGISRVVNDVVEVKEIIGTPDYVAPEVL-SYEPIS 188
I H D+KP N+++ ++ ++L D+G++ + E + + + PE+L Y+
Sbjct: 156 GIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQEYNVRVASRYFKGPELLVDYQMYD 215
Query: 189 LATDMWSVG-VLAYVLLSSHSPFAGDNKQETFLNISQCNFSFHEDLFGHI 237
+ DMWS+G +LA ++ F G + + + I++ + EDL+ +I
Sbjct: 216 YSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGT--EDLYDYI 263
>pdb|1PYX|A Chain A, Gsk-3 Beta Complexed With Amp-Pnp
pdb|1PYX|B Chain B, Gsk-3 Beta Complexed With Amp-Pnp
pdb|3DU8|A Chain A, Crystal Structure Of Gsk-3 Beta In Complex With
Nms-869553a
pdb|3DU8|B Chain B, Crystal Structure Of Gsk-3 Beta In Complex With
Nms-869553a
Length = 422
Score = 63.2 bits (152), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 37/109 (33%), Positives = 56/109 (51%), Gaps = 2/109 (1%)
Query: 116 YMKQILEALAFLHDHNITHLDLKPQNILLTKDNNI-KLCDFGISRVVNDVVEVKEIIGTP 174
YM Q+ +LA++H I H D+KPQN+LL D + KLCDFG ++ + I +
Sbjct: 163 YMYQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSR 222
Query: 175 DYVAPE-VLSYEPISLATDMWSVGVLAYVLLSSHSPFAGDNKQETFLNI 222
Y APE + + + D+WS G + LL F GD+ + + I
Sbjct: 223 YYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEI 271
>pdb|4ACC|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACC|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACD|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACD|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACG|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACG|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACH|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACH|B Chain B, Gsk3b In Complex With Inhibitor
Length = 465
Score = 63.2 bits (152), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 37/109 (33%), Positives = 56/109 (51%), Gaps = 2/109 (1%)
Query: 116 YMKQILEALAFLHDHNITHLDLKPQNILLTKDNNI-KLCDFGISRVVNDVVEVKEIIGTP 174
YM Q+ +LA++H I H D+KPQN+LL D + KLCDFG ++ + I +
Sbjct: 206 YMYQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSR 265
Query: 175 DYVAPE-VLSYEPISLATDMWSVGVLAYVLLSSHSPFAGDNKQETFLNI 222
Y APE + + + D+WS G + LL F GD+ + + I
Sbjct: 266 YYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEI 314
>pdb|1I09|A Chain A, Structure Of Glycogen Synthase Kinase-3 (Gsk3b)
pdb|1I09|B Chain B, Structure Of Glycogen Synthase Kinase-3 (Gsk3b)
pdb|1J1B|A Chain A, Binary Complex Structure Of Human Tau Protein Kinase I
With Amppnp
pdb|1J1B|B Chain B, Binary Complex Structure Of Human Tau Protein Kinase I
With Amppnp
pdb|1J1C|A Chain A, Binary Complex Structure Of Human Tau Protein Kinase I
With Adp
pdb|1J1C|B Chain B, Binary Complex Structure Of Human Tau Protein Kinase I
With Adp
pdb|2JLD|A Chain A, Extremely Tight Binding Of Ruthenium Complex To Glycogen
Synthase Kinase 3
pdb|2JLD|B Chain B, Extremely Tight Binding Of Ruthenium Complex To Glycogen
Synthase Kinase 3
pdb|3M1S|A Chain A, Structure Of Ruthenium Half-Sandwich Complex Bound To
Glycogen Synthase Kinase 3
pdb|3M1S|B Chain B, Structure Of Ruthenium Half-Sandwich Complex Bound To
Glycogen Synthase Kinase 3
pdb|3PUP|A Chain A, Structure Of Glycogen Synthase Kinase 3 Beta (Gsk3b) In
Complex With A Ruthenium Octasporine Ligand (Os1)
pdb|3PUP|B Chain B, Structure Of Glycogen Synthase Kinase 3 Beta (Gsk3b) In
Complex With A Ruthenium Octasporine Ligand (Os1)
Length = 420
Score = 63.2 bits (152), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 37/109 (33%), Positives = 56/109 (51%), Gaps = 2/109 (1%)
Query: 116 YMKQILEALAFLHDHNITHLDLKPQNILLTKDNNI-KLCDFGISRVVNDVVEVKEIIGTP 174
YM Q+ +LA++H I H D+KPQN+LL D + KLCDFG ++ + I +
Sbjct: 161 YMYQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSR 220
Query: 175 DYVAPE-VLSYEPISLATDMWSVGVLAYVLLSSHSPFAGDNKQETFLNI 222
Y APE + + + D+WS G + LL F GD+ + + I
Sbjct: 221 YYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEI 269
>pdb|4FK3|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
pdb|4FK3|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
Length = 292
Score = 63.2 bits (152), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 34/132 (25%), Positives = 71/132 (53%), Gaps = 18/132 (13%)
Query: 97 ELQRLVDIQDGIPEQDTRSYMKQILEALAFLHDHNITHLDLKPQNILLTKDNNIKLCDFG 156
E+++L+DI +Q + +LH +I H DLK NI L +DN +K+ DFG
Sbjct: 118 EMKKLIDI------------ARQTARGMDYLHAKSIIHRDLKSNNIFLHEDNTVKIGDFG 165
Query: 157 IS---RVVNDVVEVKEIIGTPDYVAPEVLSYE---PISLATDMWSVGVLAYVLLSSHSPF 210
++ + + +++ G+ ++APEV+ + P S +D+++ G++ Y L++ P+
Sbjct: 166 LATEKSRWSGSHQFEQLSGSILWMAPEVIRMQDSNPYSFQSDVYAFGIVLYELMTGQLPY 225
Query: 211 AGDNKQETFLNI 222
+ N ++ + +
Sbjct: 226 SNINNRDQIIEM 237
>pdb|1Q3D|A Chain A, Gsk-3 Beta Complexed With Staurosporine
pdb|1Q3D|B Chain B, Gsk-3 Beta Complexed With Staurosporine
pdb|1Q3W|A Chain A, Gsk-3 Beta Complexed With Alsterpaullone
pdb|1Q3W|B Chain B, Gsk-3 Beta Complexed With Alsterpaullone
pdb|1Q41|A Chain A, Gsk-3 Beta Complexed With Indirubin-3'-Monoxime
pdb|1Q41|B Chain B, Gsk-3 Beta Complexed With Indirubin-3'-Monoxime
pdb|1Q4L|A Chain A, Gsk-3 Beta Complexed With Inhibitor I-5
pdb|1Q4L|B Chain B, Gsk-3 Beta Complexed With Inhibitor I-5
pdb|3Q3B|A Chain A, 6-Amino-4-(Pyrimidin-4-Yl)pyridones: Novel Glycogen
Synthase Kinase-3 Inhibitors
pdb|3Q3B|B Chain B, 6-Amino-4-(Pyrimidin-4-Yl)pyridones: Novel Glycogen
Synthase Kinase-3 Inhibitors
Length = 424
Score = 63.2 bits (152), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 37/109 (33%), Positives = 56/109 (51%), Gaps = 2/109 (1%)
Query: 116 YMKQILEALAFLHDHNITHLDLKPQNILLTKDNNI-KLCDFGISRVVNDVVEVKEIIGTP 174
YM Q+ +LA++H I H D+KPQN+LL D + KLCDFG ++ + I +
Sbjct: 165 YMYQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSR 224
Query: 175 DYVAPE-VLSYEPISLATDMWSVGVLAYVLLSSHSPFAGDNKQETFLNI 222
Y APE + + + D+WS G + LL F GD+ + + I
Sbjct: 225 YYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEI 273
>pdb|4DIT|A Chain A, Crystal Structure Of Gsk3beta In Complex With A
Imidazopyridine Inhibitor
Length = 382
Score = 63.2 bits (152), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 37/109 (33%), Positives = 56/109 (51%), Gaps = 2/109 (1%)
Query: 116 YMKQILEALAFLHDHNITHLDLKPQNILLTKDNNI-KLCDFGISRVVNDVVEVKEIIGTP 174
YM Q+ +LA++H I H D+KPQN+LL D + KLCDFG ++ + I +
Sbjct: 139 YMYQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSR 198
Query: 175 DYVAPE-VLSYEPISLATDMWSVGVLAYVLLSSHSPFAGDNKQETFLNI 222
Y APE + + + D+WS G + LL F GD+ + + I
Sbjct: 199 YYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEI 247
>pdb|1Q5K|A Chain A, Crystal Structure Of Glycogen Synthase Kinase 3 In
Complexed With Inhibitor
pdb|1Q5K|B Chain B, Crystal Structure Of Glycogen Synthase Kinase 3 In
Complexed With Inhibitor
pdb|3I4B|A Chain A, Crystal Structure Of Gsk3b In Complex With A
Pyrimidylpyrrole Inhibitor
pdb|3I4B|B Chain B, Crystal Structure Of Gsk3b In Complex With A
Pyrimidylpyrrole Inhibitor
pdb|3L1S|A Chain A, 3-Aryl-4-(Arylhydrazono)-1h-Pyrazol-5-Ones: Highly Ligand
Efficient And Potent Inhibitors Of Gsk3
pdb|3L1S|B Chain B, 3-Aryl-4-(Arylhydrazono)-1h-Pyrazol-5-Ones: Highly Ligand
Efficient And Potent Inhibitors Of Gsk3
Length = 414
Score = 63.2 bits (152), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 37/109 (33%), Positives = 56/109 (51%), Gaps = 2/109 (1%)
Query: 116 YMKQILEALAFLHDHNITHLDLKPQNILLTKDNNI-KLCDFGISRVVNDVVEVKEIIGTP 174
YM Q+ +LA++H I H D+KPQN+LL D + KLCDFG ++ + I +
Sbjct: 155 YMYQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSR 214
Query: 175 DYVAPE-VLSYEPISLATDMWSVGVLAYVLLSSHSPFAGDNKQETFLNI 222
Y APE + + + D+WS G + LL F GD+ + + I
Sbjct: 215 YYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEI 263
>pdb|4E4L|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|E Chain E, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|D Chain D, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4N|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E4N|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E5W|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4E5W|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4EHZ|A Chain A, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|B Chain B, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|C Chain C, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|D Chain D, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EI4|A Chain A, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4EI4|B Chain B, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4FK6|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
pdb|4FK6|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
Length = 302
Score = 63.2 bits (152), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 47/188 (25%), Positives = 86/188 (45%), Gaps = 18/188 (9%)
Query: 33 KITKVEYAAKFIRKRRRSMDQMQDILHEAAVLYLAQKSERIVGLHEIYETPHEMVLVLEM 92
K K E I ++ ++ ++++ HE V Y +E + + + L++E
Sbjct: 56 KSLKPESGGNHIADLKKEIEILRNLYHENIVKYKGICTE---------DGGNGIKLIMEF 106
Query: 93 VPDGELQR-LVDIQDGIPEQDTRSYMKQILEALAFLHDHNITHLDLKPQNILLTKDNNIK 151
+P G L+ L ++ I + Y QI + + +L H DL +N+L+ ++ +K
Sbjct: 107 LPSGSLKEYLPKNKNKINLKQQLKYAVQICKGMDYLGSRQYVHRDLAARNVLVESEHQVK 166
Query: 152 LCDFGISRVVNDVVEVKEIIGTPD----YVAPEVLSYEPISLATDMWSVGVLAYVLL--- 204
+ DFG+++ + E + D + APE L +A+D+WS GV + LL
Sbjct: 167 IGDFGLTKAIETDKEXXTVKDDRDSPVFWYAPECLMQSKFYIASDVWSFGVTLHELLTYC 226
Query: 205 -SSHSPFA 211
S SP A
Sbjct: 227 DSDSSPMA 234
>pdb|3OG7|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
pdb|3OG7|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
Length = 289
Score = 63.2 bits (152), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 34/132 (25%), Positives = 71/132 (53%), Gaps = 18/132 (13%)
Query: 97 ELQRLVDIQDGIPEQDTRSYMKQILEALAFLHDHNITHLDLKPQNILLTKDNNIKLCDFG 156
E+++L+DI +Q + +LH +I H DLK NI L +DN +K+ DFG
Sbjct: 118 EMKKLIDI------------ARQTARGMDYLHAKSIIHRDLKSNNIFLHEDNTVKIGDFG 165
Query: 157 IS---RVVNDVVEVKEIIGTPDYVAPEVLSYE---PISLATDMWSVGVLAYVLLSSHSPF 210
++ + + +++ G+ ++APEV+ + P S +D+++ G++ Y L++ P+
Sbjct: 166 LATEKSRWSGSHQFEQLSGSILWMAPEVIRMQDSNPYSFQSDVYAFGIVLYELMTGQLPY 225
Query: 211 AGDNKQETFLNI 222
+ N ++ + +
Sbjct: 226 SNINNRDQIIEM 237
>pdb|3ZRK|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRK|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRL|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRL|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRM|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-
3beta Inhibitors
pdb|3ZRM|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-
3beta Inhibitors
Length = 371
Score = 63.2 bits (152), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 37/109 (33%), Positives = 56/109 (51%), Gaps = 2/109 (1%)
Query: 116 YMKQILEALAFLHDHNITHLDLKPQNILLTKDNNI-KLCDFGISRVVNDVVEVKEIIGTP 174
YM Q+ +LA++H I H D+KPQN+LL D + KLCDFG ++ + I +
Sbjct: 139 YMYQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSR 198
Query: 175 DYVAPE-VLSYEPISLATDMWSVGVLAYVLLSSHSPFAGDNKQETFLNI 222
Y APE + + + D+WS G + LL F GD+ + + I
Sbjct: 199 YYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEI 247
>pdb|1H8F|A Chain A, Glycogen Synthase Kinase 3 Beta.
pdb|1H8F|B Chain B, Glycogen Synthase Kinase 3 Beta
Length = 352
Score = 63.2 bits (152), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 43/140 (30%), Positives = 68/140 (48%), Gaps = 5/140 (3%)
Query: 88 LVLEMVPDGELQ---RLVDIQDGIPEQDTRSYMKQILEALAFLHDHNITHLDLKPQNILL 144
LVL+ VP+ + + +P + YM Q+ +LA++H I H D+KPQN+LL
Sbjct: 96 LVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFGICHRDIKPQNLLL 155
Query: 145 TKDNNI-KLCDFGISRVVNDVVEVKEIIGTPDYVAPE-VLSYEPISLATDMWSVGVLAYV 202
D + KLCDFG ++ + I + Y APE + + + D+WS G +
Sbjct: 156 DPDTAVLKLCDFGSAKQLVRGEPNVSYICSRYYRAPELIFGATDYTSSIDVWSAGCVLAE 215
Query: 203 LLSSHSPFAGDNKQETFLNI 222
LL F GD+ + + I
Sbjct: 216 LLLGQPIFPGDSGVDQLVEI 235
>pdb|3OCT|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Mutant V555r
In Complex With Dasatinib
Length = 265
Score = 63.2 bits (152), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 55/208 (26%), Positives = 96/208 (46%), Gaps = 11/208 (5%)
Query: 22 GKFASVRKCTHKITKVEYAAKFIRKRRRSMDQMQDILHEAAVLYLAQKSERIVGLHEIYE 81
G+F V+ + + + A K I++ S D+ + EA V+ + E++V L+ +
Sbjct: 20 GQFGVVKYGKWR-GQYDVAIKMIKEGSMSEDE---FIEEAKVM-MNLSHEKLVQLYGVCT 74
Query: 82 TPHEMVLVLEMVPDG-ELQRLVDIQDGIPEQDTRSYMKQILEALAFLHDHNITHLDLKPQ 140
+ ++ E + +G L L +++ Q K + EA+ +L H DL +
Sbjct: 75 KQRPIFIITEYMANGCLLNYLREMRHRFQTQQLLEMCKDVCEAMEYLESKQFLHRDLAAR 134
Query: 141 NILLTKDNNIKLCDFGISRVVNDVVEVKEIIGTP---DYVAPEVLSYEPISLATDMWSVG 197
N L+ +K+ DFG+SR V D E G+ + PEVL Y S +D+W+ G
Sbjct: 135 NCLVNDQGVVKVSDFGLSRYVLD-DEYTSSRGSKFPVRWSPPEVLMYSKFSSKSDIWAFG 193
Query: 198 VLAYVLLS-SHSPFAGDNKQETFLNISQ 224
VL + + S P+ ET +I+Q
Sbjct: 194 VLMWEIYSLGKMPYERFTNSETAEHIAQ 221
>pdb|1O9U|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide
Length = 350
Score = 63.2 bits (152), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 37/109 (33%), Positives = 56/109 (51%), Gaps = 2/109 (1%)
Query: 116 YMKQILEALAFLHDHNITHLDLKPQNILLTKDNNI-KLCDFGISRVVNDVVEVKEIIGTP 174
YM Q+ +LA++H I H D+KPQN+LL D + KLCDFG ++ + I +
Sbjct: 127 YMYQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSR 186
Query: 175 DYVAPE-VLSYEPISLATDMWSVGVLAYVLLSSHSPFAGDNKQETFLNI 222
Y APE + + + D+WS G + LL F GD+ + + I
Sbjct: 187 YYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEI 235
>pdb|3GB2|A Chain A, Gsk3beta Inhibitor Complex
Length = 353
Score = 63.2 bits (152), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 37/109 (33%), Positives = 56/109 (51%), Gaps = 2/109 (1%)
Query: 116 YMKQILEALAFLHDHNITHLDLKPQNILLTKDNNI-KLCDFGISRVVNDVVEVKEIIGTP 174
YM Q+ +LA++H I H D+KPQN+LL D + KLCDFG ++ + I +
Sbjct: 131 YMYQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSR 190
Query: 175 DYVAPE-VLSYEPISLATDMWSVGVLAYVLLSSHSPFAGDNKQETFLNI 222
Y APE + + + D+WS G + LL F GD+ + + I
Sbjct: 191 YYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEI 239
>pdb|3ZDI|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide And Inhibitor 7d
Length = 350
Score = 63.2 bits (152), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 37/109 (33%), Positives = 56/109 (51%), Gaps = 2/109 (1%)
Query: 116 YMKQILEALAFLHDHNITHLDLKPQNILLTKDNNI-KLCDFGISRVVNDVVEVKEIIGTP 174
YM Q+ +LA++H I H D+KPQN+LL D + KLCDFG ++ + I +
Sbjct: 127 YMYQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSR 186
Query: 175 DYVAPE-VLSYEPISLATDMWSVGVLAYVLLSSHSPFAGDNKQETFLNI 222
Y APE + + + D+WS G + LL F GD+ + + I
Sbjct: 187 YYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEI 235
>pdb|1UV5|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With
6-Bromoindirubin-3'-Oxime
Length = 350
Score = 63.2 bits (152), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 43/140 (30%), Positives = 68/140 (48%), Gaps = 5/140 (3%)
Query: 88 LVLEMVPDGELQ---RLVDIQDGIPEQDTRSYMKQILEALAFLHDHNITHLDLKPQNILL 144
LVL+ VP+ + + +P + YM Q+ +LA++H I H D+KPQN+LL
Sbjct: 96 LVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFGICHRDIKPQNLLL 155
Query: 145 TKDNNI-KLCDFGISRVVNDVVEVKEIIGTPDYVAPE-VLSYEPISLATDMWSVGVLAYV 202
D + KLCDFG ++ + I + Y APE + + + D+WS G +
Sbjct: 156 DPDTAVLKLCDFGSAKQLVRGEPNVSYICSRYYRAPELIFGATDYTSSIDVWSAGCVLAE 215
Query: 203 LLSSHSPFAGDNKQETFLNI 222
LL F GD+ + + I
Sbjct: 216 LLLGQPIFPGDSGVDQLVEI 235
>pdb|2OW3|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With Bis-
(Indole)maleimide Pyridinophane Inhibitor
pdb|2OW3|B Chain B, Glycogen Synthase Kinase-3 Beta In Complex With Bis-
(Indole)maleimide Pyridinophane Inhibitor
Length = 352
Score = 63.2 bits (152), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 37/109 (33%), Positives = 56/109 (51%), Gaps = 2/109 (1%)
Query: 116 YMKQILEALAFLHDHNITHLDLKPQNILLTKDNNI-KLCDFGISRVVNDVVEVKEIIGTP 174
YM Q+ +LA++H I H D+KPQN+LL D + KLCDFG ++ + I +
Sbjct: 127 YMYQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSR 186
Query: 175 DYVAPE-VLSYEPISLATDMWSVGVLAYVLLSSHSPFAGDNKQETFLNI 222
Y APE + + + D+WS G + LL F GD+ + + I
Sbjct: 187 YYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEI 235
>pdb|4AFJ|A Chain A, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective
Gsk-3 Inhibitors
pdb|4AFJ|B Chain B, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective
Gsk-3 Inhibitors
Length = 367
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 37/109 (33%), Positives = 56/109 (51%), Gaps = 2/109 (1%)
Query: 116 YMKQILEALAFLHDHNITHLDLKPQNILLTKDNNI-KLCDFGISRVVNDVVEVKEIIGTP 174
YM Q+ +LA++H I H D+KPQN+LL D + KLCDFG ++ + I +
Sbjct: 135 YMYQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSR 194
Query: 175 DYVAPE-VLSYEPISLATDMWSVGVLAYVLLSSHSPFAGDNKQETFLNI 222
Y APE + + + D+WS G + LL F GD+ + + I
Sbjct: 195 YYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEI 243
>pdb|3F7Z|A Chain A, X-ray Co-crystal Structure Of Glycogen Synthase Kinase
3beta In Complex With An Inhibitor
pdb|3F7Z|B Chain B, X-ray Co-crystal Structure Of Glycogen Synthase Kinase
3beta In Complex With An Inhibitor
Length = 350
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 37/109 (33%), Positives = 56/109 (51%), Gaps = 2/109 (1%)
Query: 116 YMKQILEALAFLHDHNITHLDLKPQNILLTKDNNI-KLCDFGISRVVNDVVEVKEIIGTP 174
YM Q+ +LA++H I H D+KPQN+LL D + KLCDFG ++ + I +
Sbjct: 128 YMYQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSR 187
Query: 175 DYVAPE-VLSYEPISLATDMWSVGVLAYVLLSSHSPFAGDNKQETFLNI 222
Y APE + + + D+WS G + LL F GD+ + + I
Sbjct: 188 YYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEI 236
>pdb|1GNG|A Chain A, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With
Frattide Peptide
pdb|1GNG|B Chain B, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With
Frattide Peptide
Length = 378
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 37/109 (33%), Positives = 56/109 (51%), Gaps = 2/109 (1%)
Query: 116 YMKQILEALAFLHDHNITHLDLKPQNILLTKDNNI-KLCDFGISRVVNDVVEVKEIIGTP 174
YM Q+ +LA++H I H D+KPQN+LL D + KLCDFG ++ + I +
Sbjct: 146 YMYQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSR 205
Query: 175 DYVAPE-VLSYEPISLATDMWSVGVLAYVLLSSHSPFAGDNKQETFLNI 222
Y APE + + + D+WS G + LL F GD+ + + I
Sbjct: 206 YYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEI 254
>pdb|3F88|A Chain A, Glycogen Synthase Kinase 3beta Inhibitor Complex
pdb|3F88|B Chain B, Glycogen Synthase Kinase 3beta Inhibitor Complex
Length = 349
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 37/109 (33%), Positives = 56/109 (51%), Gaps = 2/109 (1%)
Query: 116 YMKQILEALAFLHDHNITHLDLKPQNILLTKDNNI-KLCDFGISRVVNDVVEVKEIIGTP 174
YM Q+ +LA++H I H D+KPQN+LL D + KLCDFG ++ + I +
Sbjct: 127 YMYQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSR 186
Query: 175 DYVAPE-VLSYEPISLATDMWSVGVLAYVLLSSHSPFAGDNKQETFLNI 222
Y APE + + + D+WS G + LL F GD+ + + I
Sbjct: 187 YYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEI 235
>pdb|1R0E|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With
3-Indolyl-4- Arylmaleimide Inhibitor
pdb|1R0E|B Chain B, Glycogen Synthase Kinase-3 Beta In Complex With
3-Indolyl-4- Arylmaleimide Inhibitor
Length = 391
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 37/109 (33%), Positives = 56/109 (51%), Gaps = 2/109 (1%)
Query: 116 YMKQILEALAFLHDHNITHLDLKPQNILLTKDNNI-KLCDFGISRVVNDVVEVKEIIGTP 174
YM Q+ +LA++H I H D+KPQN+LL D + KLCDFG ++ + I +
Sbjct: 132 YMYQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSR 191
Query: 175 DYVAPE-VLSYEPISLATDMWSVGVLAYVLLSSHSPFAGDNKQETFLNI 222
Y APE + + + D+WS G + LL F GD+ + + I
Sbjct: 192 YYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEI 240
>pdb|3SD0|A Chain A, Identification Of A Glycogen Synthase Kinase-3b Inhibitor
That Attenuates Hyperactivity In Clock Mutant Mice
pdb|3SD0|B Chain B, Identification Of A Glycogen Synthase Kinase-3b Inhibitor
That Attenuates Hyperactivity In Clock Mutant Mice
pdb|4B7T|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide And Leucettine L4
Length = 350
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 43/140 (30%), Positives = 68/140 (48%), Gaps = 5/140 (3%)
Query: 88 LVLEMVPDGELQ---RLVDIQDGIPEQDTRSYMKQILEALAFLHDHNITHLDLKPQNILL 144
LVL+ VP+ + + +P + YM Q+ +LA++H I H D+KPQN+LL
Sbjct: 96 LVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFGICHRDIKPQNLLL 155
Query: 145 TKDNNI-KLCDFGISRVVNDVVEVKEIIGTPDYVAPE-VLSYEPISLATDMWSVGVLAYV 202
D + KLCDFG ++ + I + Y APE + + + D+WS G +
Sbjct: 156 DPDTAVLKLCDFGSAKQLVRGEPNVSYICSRYYRAPELIFGATDYTSSIDVWSAGCVLAE 215
Query: 203 LLSSHSPFAGDNKQETFLNI 222
LL F GD+ + + I
Sbjct: 216 LLLGQPIFPGDSGVDQLVEI 235
>pdb|2P2H|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridinyl-Triazine Inhibitor
pdb|2QU5|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzimidazole Inhibitor
pdb|2QU6|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzoxazole Inhibitor
pdb|2QU6|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzoxazole Inhibitor
pdb|3B8Q|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8Q|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8R|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8R|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|2RL5|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A 2,3-Dihydro-1,4-Benzoxazine Inhibitor
pdb|3BE2|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzamide Inhibitor
pdb|3CP9|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CP9|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CPB|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Bisamide Inhibitor
pdb|3CPB|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Bisamide Inhibitor
pdb|3CPC|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CPC|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3DTW|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzisoxazole Inhibitor
pdb|3DTW|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzisoxazole Inhibitor
Length = 314
Score = 62.8 bits (151), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 35/108 (32%), Positives = 57/108 (52%), Gaps = 4/108 (3%)
Query: 116 YMKQILEALAFLHDHNITHLDLKPQNILLTKDNNIKLCDFGISRVVN---DVVEVKEIIG 172
Y Q+ + + FL H DL +NILL++ N +K+CDFG++R + D V +
Sbjct: 144 YSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIXKDPDXVRKGDARL 203
Query: 173 TPDYVAPEVLSYEPISLATDMWSVGVLAYVLLS-SHSPFAGDNKQETF 219
++APE + ++ +D+WS GVL + + S SP+ G E F
Sbjct: 204 PLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEF 251
>pdb|2P2I|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Nicotinamide Inhibitor
pdb|2P2I|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Nicotinamide Inhibitor
pdb|3EFL|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Motesanib
pdb|3EFL|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Motesanib
Length = 314
Score = 62.8 bits (151), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 35/108 (32%), Positives = 57/108 (52%), Gaps = 4/108 (3%)
Query: 116 YMKQILEALAFLHDHNITHLDLKPQNILLTKDNNIKLCDFGISRVVN---DVVEVKEIIG 172
Y Q+ + + FL H DL +NILL++ N +K+CDFG++R + D V +
Sbjct: 144 YSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIXKDPDXVRKGDARL 203
Query: 173 TPDYVAPEVLSYEPISLATDMWSVGVLAYVLLS-SHSPFAGDNKQETF 219
++APE + ++ +D+WS GVL + + S SP+ G E F
Sbjct: 204 PLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEF 251
>pdb|2O5K|A Chain A, Crystal Structure Of Gsk3beta In Complex With A
Benzoimidazol Inhibitor
Length = 372
Score = 62.8 bits (151), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 37/109 (33%), Positives = 56/109 (51%), Gaps = 2/109 (1%)
Query: 116 YMKQILEALAFLHDHNITHLDLKPQNILLTKDNNI-KLCDFGISRVVNDVVEVKEIIGTP 174
YM Q+ +LA++H I H D+KPQN+LL D + KLCDFG ++ + I +
Sbjct: 140 YMYQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSR 199
Query: 175 DYVAPE-VLSYEPISLATDMWSVGVLAYVLLSSHSPFAGDNKQETFLNI 222
Y APE + + + D+WS G + LL F GD+ + + I
Sbjct: 200 YYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEI 248
>pdb|1AD5|A Chain A, Src Family Kinase Hck-Amp-Pnp Complex
pdb|1AD5|B Chain B, Src Family Kinase Hck-Amp-Pnp Complex
pdb|2HCK|A Chain A, Src Family Kinase Hck-Quercetin Complex
pdb|2HCK|B Chain B, Src Family Kinase Hck-Quercetin Complex
Length = 438
Score = 62.8 bits (151), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 55/200 (27%), Positives = 96/200 (48%), Gaps = 19/200 (9%)
Query: 22 GKFASVRKCTH-KITKVEYAAKFIRKRRRSMDQMQDILHEAAVLYLAQKSERIVGLHEIY 80
G+F V T+ K TKV A K ++ S++ L EA V+ Q +++V LH +
Sbjct: 193 GQFGEVWMATYNKHTKV--AVKTMKPGSMSVEA---FLAEANVMKTLQ-HDKLVKLHAVV 246
Query: 81 ETPHEMVLVLEMVPDGELQRLVDIQDGI--PEQDTRSYMKQILEALAFLHDHNITHLDLK 138
T + ++ E + G L + +G P + QI E +AF+ N H DL+
Sbjct: 247 -TKEPIYIITEFMAKGSLLDFLKSDEGSKQPLPKLIDFSAQIAEGMAFIEQRNYIHRDLR 305
Query: 139 PQNILLTKDNNIKLCDFGISRVVNDVVEVKEIIGTPDYVAPEVLSYEPISLATDMWSVGV 198
NIL++ K+ DFG++R V +K + APE +++ ++ +D+WS G+
Sbjct: 306 AANILVSASLVCKIADFGLAR-VGAKFPIK-------WTAPEAINFGSFTIKSDVWSFGI 357
Query: 199 LAYVLLS-SHSPFAGDNKQE 217
L +++ P+ G + E
Sbjct: 358 LLMEIVTYGRIPYPGMSNPE 377
>pdb|3VID|A Chain A, Crystal Structure Of Human Vegfr2 Kinase Domain With
Compound A
Length = 356
Score = 62.8 bits (151), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 38/117 (32%), Positives = 57/117 (48%), Gaps = 22/117 (18%)
Query: 116 YMKQILEALAFLHDHNITHLDLKPQNILLTKDNNIKLCDFGISRVVNDVVEVKEIIGTPD 175
Y Q+ + + FL H DL +NILL++ N +K+CDFG++R +I PD
Sbjct: 196 YSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLAR---------DIYKDPD 246
Query: 176 YV------------APEVLSYEPISLATDMWSVGVLAYVLLS-SHSPFAGDNKQETF 219
YV APE + ++ +D+WS GVL + + S SP+ G E F
Sbjct: 247 YVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEF 303
>pdb|3GBZ|A Chain A, Structure Of The Cmgc Cdk Kinase From Giardia Lamblia
pdb|3GC0|A Chain A, Structure Of The Cmgc Cdk Kinase From Giardia Lamblia In
Complex With Amp
Length = 329
Score = 62.8 bits (151), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 53/209 (25%), Positives = 92/209 (44%), Gaps = 11/209 (5%)
Query: 22 GKFASVRKCTHKITKVEYAAKFIRKRRRSMDQMQDILHEAAVLYLAQKSERIVGLHEIYE 81
G + V K +T A K IR + E ++L Q I+ L +
Sbjct: 45 GTYGEVYKAIDTVTNETVAIKRIRLEHEEEGVPGTAIREVSLLKELQH-RNIIELKSVIH 103
Query: 82 TPHEMVLVLEMVPDGELQRLVDIQDGIPEQDTRSYMKQILEALAFLHDHNITHLDLKPQN 141
H + L+ E + +L++ +D + + +S++ Q++ + F H H DLKPQN
Sbjct: 104 HNHRLHLIFEYA-ENDLKKYMDKNPDVSMRVIKSFLYQLINGVNFCHSRRCLHRDLKPQN 162
Query: 142 ILLTKDNN-----IKLCDFGISRVVNDVVE--VKEIIGTPDYVAPEV-LSYEPISLATDM 193
+LL+ + +K+ DFG++R + EII T Y PE+ L S + D+
Sbjct: 163 LLLSVSDASETPVLKIGDFGLARAFGIPIRQFTHEII-TLWYRPPEILLGSRHYSTSVDI 221
Query: 194 WSVGVLAYVLLSSHSPFAGDNKQETFLNI 222
WS+ + +L F GD++ + I
Sbjct: 222 WSIACIWAEMLMKTPLFPGDSEIDQLFKI 250
>pdb|3VHE|A Chain A, Crystal Structure Of Human Vegfr2 Kinase Domain With A
Novel Pyrrolopyrimidine Inhibitor
Length = 359
Score = 62.8 bits (151), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 38/117 (32%), Positives = 57/117 (48%), Gaps = 22/117 (18%)
Query: 116 YMKQILEALAFLHDHNITHLDLKPQNILLTKDNNIKLCDFGISRVVNDVVEVKEIIGTPD 175
Y Q+ + + FL H DL +NILL++ N +K+CDFG++R +I PD
Sbjct: 198 YSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLAR---------DIYKDPD 248
Query: 176 YV------------APEVLSYEPISLATDMWSVGVLAYVLLS-SHSPFAGDNKQETF 219
YV APE + ++ +D+WS GVL + + S SP+ G E F
Sbjct: 249 YVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEF 305
>pdb|3VHK|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Back Pocket Binder
Length = 368
Score = 62.8 bits (151), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 38/117 (32%), Positives = 57/117 (48%), Gaps = 22/117 (18%)
Query: 116 YMKQILEALAFLHDHNITHLDLKPQNILLTKDNNIKLCDFGISRVVNDVVEVKEIIGTPD 175
Y Q+ + + FL H DL +NILL++ N +K+CDFG++R +I PD
Sbjct: 205 YSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLAR---------DIYKDPD 255
Query: 176 YV------------APEVLSYEPISLATDMWSVGVLAYVLLS-SHSPFAGDNKQETF 219
YV APE + ++ +D+WS GVL + + S SP+ G E F
Sbjct: 256 YVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEF 312
>pdb|1YWN|A Chain A, Vegfr2 In Complex With A Novel
4-amino-furo[2,3-d]pyrimidine
Length = 316
Score = 62.8 bits (151), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 35/108 (32%), Positives = 57/108 (52%), Gaps = 4/108 (3%)
Query: 116 YMKQILEALAFLHDHNITHLDLKPQNILLTKDNNIKLCDFGISRVVN---DVVEVKEIIG 172
Y Q+ + + FL H DL +NILL++ N +K+CDFG++R + D V +
Sbjct: 153 YSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIXKDPDXVRKGDARL 212
Query: 173 TPDYVAPEVLSYEPISLATDMWSVGVLAYVLLS-SHSPFAGDNKQETF 219
++APE + ++ +D+WS GVL + + S SP+ G E F
Sbjct: 213 PLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEF 260
>pdb|3U6J|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyrazolone Inhibitor
Length = 314
Score = 62.8 bits (151), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 35/108 (32%), Positives = 57/108 (52%), Gaps = 4/108 (3%)
Query: 116 YMKQILEALAFLHDHNITHLDLKPQNILLTKDNNIKLCDFGISRVV---NDVVEVKEIIG 172
Y Q+ + + FL H DL +NILL++ N +K+CDFG++R + D V +
Sbjct: 144 YSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARL 203
Query: 173 TPDYVAPEVLSYEPISLATDMWSVGVLAYVLLS-SHSPFAGDNKQETF 219
++APE + ++ +D+WS GVL + + S SP+ G E F
Sbjct: 204 PLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEF 251
>pdb|3EWH|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridyl-Pyrimidine Benzimidazole Inhibitor
Length = 314
Score = 62.8 bits (151), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 35/108 (32%), Positives = 57/108 (52%), Gaps = 4/108 (3%)
Query: 116 YMKQILEALAFLHDHNITHLDLKPQNILLTKDNNIKLCDFGISRVV---NDVVEVKEIIG 172
Y Q+ + + FL H DL +NILL++ N +K+CDFG++R + D V +
Sbjct: 144 YSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARL 203
Query: 173 TPDYVAPEVLSYEPISLATDMWSVGVLAYVLLS-SHSPFAGDNKQETF 219
++APE + ++ +D+WS GVL + + S SP+ G E F
Sbjct: 204 PLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEF 251
>pdb|1Y6A|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
2-Anilino-5-Aryl-Oxazole Inhibitor
pdb|1Y6B|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
2-Anilino-5-Aryl-Oxazole Inhibitor
Length = 366
Score = 62.4 bits (150), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 38/117 (32%), Positives = 57/117 (48%), Gaps = 22/117 (18%)
Query: 116 YMKQILEALAFLHDHNITHLDLKPQNILLTKDNNIKLCDFGISRVVNDVVEVKEIIGTPD 175
Y Q+ + + FL H DL +NILL++ N +K+CDFG++R +I PD
Sbjct: 203 YSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLAR---------DIYKDPD 253
Query: 176 YV------------APEVLSYEPISLATDMWSVGVLAYVLLS-SHSPFAGDNKQETF 219
YV APE + ++ +D+WS GVL + + S SP+ G E F
Sbjct: 254 YVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEF 310
>pdb|2OH4|A Chain A, Crystal Structure Of Vegfr2 With A Benzimidazole-Urea
Inhibitor
Length = 316
Score = 62.4 bits (150), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 35/108 (32%), Positives = 57/108 (52%), Gaps = 4/108 (3%)
Query: 116 YMKQILEALAFLHDHNITHLDLKPQNILLTKDNNIKLCDFGISRVVN---DVVEVKEIIG 172
Y Q+ + + FL H DL +NILL++ N +K+CDFG++R + D V +
Sbjct: 153 YSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIXKDPDXVRKGDARL 212
Query: 173 TPDYVAPEVLSYEPISLATDMWSVGVLAYVLLS-SHSPFAGDNKQETF 219
++APE + ++ +D+WS GVL + + S SP+ G E F
Sbjct: 213 PLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEF 260
>pdb|3C7Q|A Chain A, Structure Of Vegfr2 Kinase Domain In Complex With Bibf1120
Length = 316
Score = 62.4 bits (150), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 35/108 (32%), Positives = 57/108 (52%), Gaps = 4/108 (3%)
Query: 116 YMKQILEALAFLHDHNITHLDLKPQNILLTKDNNIKLCDFGISRVVN---DVVEVKEIIG 172
Y Q+ + + FL H DL +NILL++ N +K+CDFG++R + D V +
Sbjct: 153 YSFQVAKGMEFLASRKXIHRDLAARNILLSEKNVVKICDFGLARDIXKDPDXVRKGDARL 212
Query: 173 TPDYVAPEVLSYEPISLATDMWSVGVLAYVLLS-SHSPFAGDNKQETF 219
++APE + ++ +D+WS GVL + + S SP+ G E F
Sbjct: 213 PLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEF 260
>pdb|1VR2|A Chain A, Human Vascular Endothelial Growth Factor Receptor 2 (Kdr)
Kinase Domain
Length = 316
Score = 62.4 bits (150), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 35/108 (32%), Positives = 57/108 (52%), Gaps = 4/108 (3%)
Query: 116 YMKQILEALAFLHDHNITHLDLKPQNILLTKDNNIKLCDFGISRVV---NDVVEVKEIIG 172
Y Q+ + + FL H DL +NILL++ N +K+CDFG++R + D V +
Sbjct: 153 YSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDXVRKGDARL 212
Query: 173 TPDYVAPEVLSYEPISLATDMWSVGVLAYVLLS-SHSPFAGDNKQETF 219
++APE + ++ +D+WS GVL + + S SP+ G E F
Sbjct: 213 PLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEF 260
>pdb|4AGC|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Axitinib (Ag-013736)
(N-Methyl-2-(
3-((E)-2-Pyridin-2-Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)-
Benzamide)
pdb|4AGD|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Sunitinib (Su11248) (N-2-
Diethylaminoethyl)-5-((Z)-(5-Fluoro-2-Oxo-1h-Indol-3-
Ylidene)methyl)-2,4-Dimethyl-1h-Pyrrole-3-Carboxamide)
pdb|4ASD|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Sorafenib (Bay 43-9006)
pdb|4ASE|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Tivozanib (Av-951)
Length = 353
Score = 62.4 bits (150), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 38/117 (32%), Positives = 57/117 (48%), Gaps = 22/117 (18%)
Query: 116 YMKQILEALAFLHDHNITHLDLKPQNILLTKDNNIKLCDFGISRVVNDVVEVKEIIGTPD 175
Y Q+ + + FL H DL +NILL++ N +K+CDFG++R +I PD
Sbjct: 190 YSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLAR---------DIYKDPD 240
Query: 176 YV------------APEVLSYEPISLATDMWSVGVLAYVLLS-SHSPFAGDNKQETF 219
YV APE + ++ +D+WS GVL + + S SP+ G E F
Sbjct: 241 YVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEF 297
>pdb|2XIR|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Pf-00337210 (N,2-Dimethyl-6-(7-(2-Morpholinoethoxy)
Quinolin-4-Yloxy)benzofuran-3-Carboxamide)
pdb|4AG8|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Axitinib (Ag-013736)
(N-Methyl-2-(3-((E)-2-Pyridin-2-
Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)-Benzamide)
Length = 316
Score = 62.4 bits (150), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 35/108 (32%), Positives = 57/108 (52%), Gaps = 4/108 (3%)
Query: 116 YMKQILEALAFLHDHNITHLDLKPQNILLTKDNNIKLCDFGISRVV---NDVVEVKEIIG 172
Y Q+ + + FL H DL +NILL++ N +K+CDFG++R + D V +
Sbjct: 153 YSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARL 212
Query: 173 TPDYVAPEVLSYEPISLATDMWSVGVLAYVLLS-SHSPFAGDNKQETF 219
++APE + ++ +D+WS GVL + + S SP+ G E F
Sbjct: 213 PLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEF 260
>pdb|3VNT|A Chain A, Crystal Structure Of The Kinase Domain Of Human Vegfr2
With A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 318
Score = 62.4 bits (150), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 35/108 (32%), Positives = 57/108 (52%), Gaps = 4/108 (3%)
Query: 116 YMKQILEALAFLHDHNITHLDLKPQNILLTKDNNIKLCDFGISRVV---NDVVEVKEIIG 172
Y Q+ + + FL H DL +NILL++ N +K+CDFG++R + D V +
Sbjct: 155 YSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARL 214
Query: 173 TPDYVAPEVLSYEPISLATDMWSVGVLAYVLLS-SHSPFAGDNKQETF 219
++APE + ++ +D+WS GVL + + S SP+ G E F
Sbjct: 215 PLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEF 262
>pdb|1CM8|A Chain A, Phosphorylated Map Kinase P38-Gamma
pdb|1CM8|B Chain B, Phosphorylated Map Kinase P38-Gamma
Length = 367
Score = 62.4 bits (150), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 36/131 (27%), Positives = 70/131 (53%), Gaps = 4/131 (3%)
Query: 119 QILEALAFLHDHNITHLDLKPQNILLTKDNNIKLCDFGISRVVNDVVEVKEIIGTPDYVA 178
Q+L+ L ++H I H DLKP N+ + +D +K+ DFG++R + E+ + T Y A
Sbjct: 136 QMLKGLRYIHAAGIIHRDLKPGNLAVNEDCELKILDFGLARQADS--EMXGXVVTRWYRA 193
Query: 179 PEV-LSYEPISLATDMWSVGVLAYVLLSSHSPFAGDNKQETFLNISQCNFSFHEDLFGHI 237
PEV L++ + D+WSVG + +++ + F G + + I + + + +
Sbjct: 194 PEVILNWMRYTQTVDIWSVGCIMAEMITGKTLFKGSDHLDQLKEIMKVTGTPPAEFVQRL 253
Query: 238 SS-QAKDFIQS 247
S +AK++++
Sbjct: 254 QSDEAKNYMKG 264
>pdb|3CJG|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
3,4,5-Trimethoxy Aniline Containing Pyrimidine
Length = 309
Score = 62.0 bits (149), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 38/117 (32%), Positives = 57/117 (48%), Gaps = 22/117 (18%)
Query: 116 YMKQILEALAFLHDHNITHLDLKPQNILLTKDNNIKLCDFGISRVVNDVVEVKEIIGTPD 175
Y Q+ + + FL H DL +NILL++ N +K+CDFG++R +I PD
Sbjct: 149 YSFQVAKGMEFLASRKXIHRDLAARNILLSEKNVVKICDFGLAR---------DIYKDPD 199
Query: 176 YV------------APEVLSYEPISLATDMWSVGVLAYVLLS-SHSPFAGDNKQETF 219
YV APE + ++ +D+WS GVL + + S SP+ G E F
Sbjct: 200 YVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEF 256
>pdb|3CC6|A Chain A, Crystal Structure Of Kinase Domain Of Protein Tyrosine
Kinase 2 Beta (ptk2b)
Length = 281
Score = 62.0 bits (149), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 49/184 (26%), Positives = 89/184 (48%), Gaps = 7/184 (3%)
Query: 31 THKITKVEYAAKFIRKRRRSMDQMQDILHEAAVLYLAQKSERIVGLHEIYETPHEMVLVL 90
HK K+ A K +K ++D + + EA ++ + + I E P +++
Sbjct: 35 NHKGEKINVAVKTCKKDC-TLDNKEKFMSEAVIMKNLDHPHIVKLIGIIEEEP--TWIIM 91
Query: 91 EMVPDGELQRLVDI-QDGIPEQDTRSYMKQILEALAFLHDHNITHLDLKPQNILLTKDNN 149
E+ P GEL ++ ++ + Y QI +A+A+L N H D+ +NIL+
Sbjct: 92 ELYPYGELGHYLERNKNSLKVLTLVLYSLQICKAMAYLESINCVHRDIAVRNILVASPEC 151
Query: 150 IKLCDFGISRVVNDVVEVK-EIIGTP-DYVAPEVLSYEPISLATDMWSVGVLAYVLLS-S 206
+KL DFG+SR + D K + P +++PE +++ + A+D+W V + +LS
Sbjct: 152 VKLGDFGLSRYIEDEDYYKASVTRLPIKWMSPESINFRRFTTASDVWMFAVCMWEILSFG 211
Query: 207 HSPF 210
PF
Sbjct: 212 KQPF 215
>pdb|2PZI|A Chain A, Crystal Structure Of Protein Kinase Pkng From
Mycobacterium Tuberculosis In Complex With
Tetrahydrobenzothiophene Ax20017
pdb|2PZI|B Chain B, Crystal Structure Of Protein Kinase Pkng From
Mycobacterium Tuberculosis In Complex With
Tetrahydrobenzothiophene Ax20017
Length = 681
Score = 62.0 bits (149), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 38/110 (34%), Positives = 66/110 (60%), Gaps = 7/110 (6%)
Query: 88 LVLEMVPDGELQRLVDIQDGIPEQDTRSYMKQILEALAFLHDHNITHLDLKPQNILLTKD 147
+V+E V L+R +P + +Y+ +IL AL++LH + + DLKP+NI+LT++
Sbjct: 161 IVMEYVGGQSLKR--SKGQKLPVAEAIAYLLEILPALSYLHSIGLVYNDLKPENIMLTEE 218
Query: 148 NNIKLCDFGISRVVNDVVEVKEIIGTPDYVAPEVLSYEPISLATDMWSVG 197
+KL D G V+ + + GTP + APE++ P ++ATD+++VG
Sbjct: 219 -QLKLIDLG---AVSRINSFGYLYGTPGFQAPEIVRTGP-TVATDIYTVG 263
>pdb|2REI|A Chain A, Kinase Domain Of Human Ephrin Type-a Receptor 7 (epha7)
pdb|3DKO|A Chain A, Complex Between The Kinase Domain Of Human Ephrin Type-A
Receptor 7 (Epha7) And Inhibitor Alw-Ii-49-7
Length = 318
Score = 62.0 bits (149), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 46/178 (25%), Positives = 83/178 (46%), Gaps = 7/178 (3%)
Query: 53 QMQDILHEAAVLYLAQKSERIVGLHEIYETPHEMVLVLEMVPDGELQRLVDIQDG-IPEQ 111
Q +D L EA+++ +V L + +++V+E + +G L + DG
Sbjct: 87 QRRDFLCEASIMGQFDHPN-VVHLEGVVTRGKPVMIVIEFMENGALDAFLRKHDGQFTVI 145
Query: 112 DTRSYMKQILEALAFLHDHNITHLDLKPQNILLTKDNNIKLCDFGISRVVNDVVE-VKEI 170
++ I + +L D H DL +NIL+ + K+ DFG+SRV+ D E V
Sbjct: 146 QLVGMLRGIAAGMRYLADMGYVHRDLAARNILVNSNLVCKVSDFGLSRVIEDDPEAVYTT 205
Query: 171 IGTP---DYVAPEVLSYEPISLATDMWSVGVLAYVLLS-SHSPFAGDNKQETFLNISQ 224
G + APE + Y + A+D+WS G++ + ++S P+ + Q+ I +
Sbjct: 206 TGGKIPVRWTAPEAIQYRKFTSASDVWSYGIVMWEVMSYGERPYWDMSNQDVIKAIEE 263
>pdb|3FZO|A Chain A, Crystal Structure Of Pyk2-Apo, Proline-Rich Tyrosine
Kinase
pdb|3FZP|A Chain A, Crystal Structure Of Pyk2 Complexed With Atpgs
pdb|3FZR|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-431396
pdb|3FZS|A Chain A, Crystal Structure Of Pyk2 Complexed With Birb796
pdb|3FZT|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-4618433
pdb|3H3C|A Chain A, Crystal Structure Of Pyk2 In Complex With Sulfoximine-
Substituted Trifluoromethylpyrimidine Analog
pdb|3ET7|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-2318841
Length = 277
Score = 62.0 bits (149), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 49/184 (26%), Positives = 89/184 (48%), Gaps = 7/184 (3%)
Query: 31 THKITKVEYAAKFIRKRRRSMDQMQDILHEAAVLYLAQKSERIVGLHEIYETPHEMVLVL 90
HK K+ A K +K ++D + + EA ++ + + I E P +++
Sbjct: 31 NHKGEKINVAVKTCKKDC-TLDNKEKFMSEAVIMKNLDHPHIVKLIGIIEEEP--TWIIM 87
Query: 91 EMVPDGELQRLVDI-QDGIPEQDTRSYMKQILEALAFLHDHNITHLDLKPQNILLTKDNN 149
E+ P GEL ++ ++ + Y QI +A+A+L N H D+ +NIL+
Sbjct: 88 ELYPYGELGHYLERNKNSLKVLTLVLYSLQICKAMAYLESINCVHRDIAVRNILVASPEC 147
Query: 150 IKLCDFGISRVVNDVVEVK-EIIGTP-DYVAPEVLSYEPISLATDMWSVGVLAYVLLS-S 206
+KL DFG+SR + D K + P +++PE +++ + A+D+W V + +LS
Sbjct: 148 VKLGDFGLSRYIEDEDYYKASVTRLPIKWMSPESINFRRFTTASDVWMFAVCMWEILSFG 207
Query: 207 HSPF 210
PF
Sbjct: 208 KQPF 211
>pdb|4H1J|A Chain A, Crystal Structure Of Pyk2 With The Pyrazole 13a
pdb|4H1M|A Chain A, Crystal Structure Of Pyk2 With The Indole 10c
Length = 293
Score = 61.6 bits (148), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 49/184 (26%), Positives = 89/184 (48%), Gaps = 7/184 (3%)
Query: 31 THKITKVEYAAKFIRKRRRSMDQMQDILHEAAVLYLAQKSERIVGLHEIYETPHEMVLVL 90
HK K+ A K +K ++D + + EA ++ + + I E P +++
Sbjct: 47 NHKGEKINVAVKTCKKDC-TLDNKEKFMSEAVIMKNLDHPHIVKLIGIIEEEP--TWIIM 103
Query: 91 EMVPDGELQRLVDI-QDGIPEQDTRSYMKQILEALAFLHDHNITHLDLKPQNILLTKDNN 149
E+ P GEL ++ ++ + Y QI +A+A+L N H D+ +NIL+
Sbjct: 104 ELYPYGELGHYLERNKNSLKVLTLVLYSLQICKAMAYLESINCVHRDIAVRNILVASPEC 163
Query: 150 IKLCDFGISRVVNDVVEVK-EIIGTP-DYVAPEVLSYEPISLATDMWSVGVLAYVLLS-S 206
+KL DFG+SR + D K + P +++PE +++ + A+D+W V + +LS
Sbjct: 164 VKLGDFGLSRYIEDEDYYKASVTRLPIKWMSPESINFRRFTTASDVWMFAVCMWEILSFG 223
Query: 207 HSPF 210
PF
Sbjct: 224 KQPF 227
>pdb|4F4P|A Chain A, Syk In Complex With Ligand Lasw836
Length = 273
Score = 61.6 bits (148), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 38/146 (26%), Positives = 71/146 (48%), Gaps = 9/146 (6%)
Query: 72 RIVGLHEIYETPHEMVLVLEMVPDGELQRLVDIQDGIPEQDTRSYMKQILEALAFLHDHN 131
R++G+ E +LV+EM G L + + + +++ + Q+ + +L + N
Sbjct: 70 RMIGICE----AESWMLVMEMAELGPLNKYLQQNRHVKDKNIIELVHQVSMGMKYLEESN 125
Query: 132 ITHLDLKPQNILLTKDNNIKLCDFGISRVVN---DVVEVKEIIGTP-DYVAPEVLSYEPI 187
H DL +N+LL + K+ DFG+S+ + + + + P + APE ++Y
Sbjct: 126 FVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECINYYKF 185
Query: 188 SLATDMWSVGVLAYVLLS-SHSPFAG 212
S +D+WS GVL + S P+ G
Sbjct: 186 SSKSDVWSFGVLMWEAFSYGQKPYRG 211
>pdb|4DFL|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A Sulfonamidopyrazine Piperidine Inhibitor
pdb|4DFN|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
An Adamantylpyrazine Inhibitor
Length = 274
Score = 61.6 bits (148), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 38/146 (26%), Positives = 71/146 (48%), Gaps = 9/146 (6%)
Query: 72 RIVGLHEIYETPHEMVLVLEMVPDGELQRLVDIQDGIPEQDTRSYMKQILEALAFLHDHN 131
R++G+ E +LV+EM G L + + + +++ + Q+ + +L + N
Sbjct: 72 RMIGICE----AESWMLVMEMAELGPLNKYLQQNRHVKDKNIIELVHQVSMGMKYLEESN 127
Query: 132 ITHLDLKPQNILLTKDNNIKLCDFGISRVVN---DVVEVKEIIGTP-DYVAPEVLSYEPI 187
H DL +N+LL + K+ DFG+S+ + + + + P + APE ++Y
Sbjct: 128 FVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECINYYKF 187
Query: 188 SLATDMWSVGVLAYVLLS-SHSPFAG 212
S +D+WS GVL + S P+ G
Sbjct: 188 SSKSDVWSFGVLMWEAFSYGQKPYRG 213
>pdb|3SRV|B Chain B, Crystal Structure Of Spleen Tyrosine Kinase (Syk) In
Complex With A Diaminopyrimidine Carboxamide Inhibitor
Length = 277
Score = 61.6 bits (148), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 38/146 (26%), Positives = 71/146 (48%), Gaps = 9/146 (6%)
Query: 72 RIVGLHEIYETPHEMVLVLEMVPDGELQRLVDIQDGIPEQDTRSYMKQILEALAFLHDHN 131
R++G+ E +LV+EM G L + + + +++ + Q+ + +L + N
Sbjct: 76 RMIGICE----AESWMLVMEMAELGPLNKYLQQNRHVKDKNIIELVHQVSMGMKYLEESN 131
Query: 132 ITHLDLKPQNILLTKDNNIKLCDFGISRVVN---DVVEVKEIIGTP-DYVAPEVLSYEPI 187
H DL +N+LL + K+ DFG+S+ + + + + P + APE ++Y
Sbjct: 132 FVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECINYYKF 191
Query: 188 SLATDMWSVGVLAYVLLS-SHSPFAG 212
S +D+WS GVL + S P+ G
Sbjct: 192 SSKSDVWSFGVLMWEAFSYGQKPYRG 217
>pdb|3SRV|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase (Syk) In
Complex With A Diaminopyrimidine Carboxamide Inhibitor
Length = 277
Score = 61.6 bits (148), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 38/146 (26%), Positives = 71/146 (48%), Gaps = 9/146 (6%)
Query: 72 RIVGLHEIYETPHEMVLVLEMVPDGELQRLVDIQDGIPEQDTRSYMKQILEALAFLHDHN 131
R++G+ E +LV+EM G L + + + +++ + Q+ + +L + N
Sbjct: 76 RMIGICE----AESWMLVMEMAELGPLNKYLQQNRHVKDKNIIELVHQVSMGMKYLEESN 131
Query: 132 ITHLDLKPQNILLTKDNNIKLCDFGISRVVN---DVVEVKEIIGTP-DYVAPEVLSYEPI 187
H DL +N+LL + K+ DFG+S+ + + + + P + APE ++Y
Sbjct: 132 FVHRDLAARNVLLVTQHYAKISDFGLSKALRADENXYKAQTHGKWPVKWYAPECINYYKF 191
Query: 188 SLATDMWSVGVLAYVLLS-SHSPFAG 212
S +D+WS GVL + S P+ G
Sbjct: 192 SSKSDVWSFGVLMWEAFSYGQKPYRG 217
>pdb|1XBA|A Chain A, Crystal Structure Of Apo Syk Tyrosine Kinase Domain
pdb|1XBB|A Chain A, Crystal Structure Of The Syk Tyrosine Kinase Domain With
Gleevec
pdb|1XBC|A Chain A, Crystal Structure Of The Syk Tyrosine Kinase Domain With
Staurosporin
pdb|3FQE|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
Ym193306
pdb|3FQH|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A 2-Substituted 7-Azaindole
pdb|3FQH|B Chain B, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A 2-Substituted 7-Azaindole
pdb|3FQS|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
R406
pdb|4FL1|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
pdb|4FYN|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
3-(8-{4-
[ethyl-(2-hydroxy-ethyl)-amino]-phenylamino}-imidazo[1,
2-a]pyrazin-5- Yl)-phenol
pdb|4FYO|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
N-{(s)-1-
[7-(3,4-dimethoxy-phenylamino)-thiazolo[5,
4-d]pyrimidin-5-yl]- Pyrrolidin-3-yl}-terephthalamic
Acid
pdb|4FZ6|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
[6-((s)-2-
Methyl-pyrrolidin-1-yl)-pyridin-2-yl]-(6-phenyl-
imidazo[1,2- B]pyridazin-8-yl)-amine
Length = 291
Score = 61.2 bits (147), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 38/146 (26%), Positives = 71/146 (48%), Gaps = 9/146 (6%)
Query: 72 RIVGLHEIYETPHEMVLVLEMVPDGELQRLVDIQDGIPEQDTRSYMKQILEALAFLHDHN 131
R++G+ E +LV+EM G L + + + +++ + Q+ + +L + N
Sbjct: 82 RMIGICE----AESWMLVMEMAELGPLNKYLQQNRHVKDKNIIELVHQVSMGMKYLEESN 137
Query: 132 ITHLDLKPQNILLTKDNNIKLCDFGISRVVN---DVVEVKEIIGTP-DYVAPEVLSYEPI 187
H DL +N+LL + K+ DFG+S+ + + + + P + APE ++Y
Sbjct: 138 FVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECINYYKF 197
Query: 188 SLATDMWSVGVLAYVLLS-SHSPFAG 212
S +D+WS GVL + S P+ G
Sbjct: 198 SSKSDVWSFGVLMWEAFSYGQKPYRG 223
>pdb|3EMG|A Chain A, Discovery And Sar Of Novel 4-Thiazolyl-2-
Phenylaminopyrimidines As Potent Inhibitors Of Spleen
Tyrosine Kinase (Syk)
Length = 291
Score = 61.2 bits (147), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 38/146 (26%), Positives = 71/146 (48%), Gaps = 9/146 (6%)
Query: 72 RIVGLHEIYETPHEMVLVLEMVPDGELQRLVDIQDGIPEQDTRSYMKQILEALAFLHDHN 131
R++G+ E +LV+EM G L + + + +++ + Q+ + +L + N
Sbjct: 90 RMIGICEA----ESWMLVMEMAELGPLNKYLQQNRHVKDKNIIELVHQVSMGMKYLEESN 145
Query: 132 ITHLDLKPQNILLTKDNNIKLCDFGISRVVN---DVVEVKEIIGTP-DYVAPEVLSYEPI 187
H DL +N+LL + K+ DFG+S+ + + + + P + APE ++Y
Sbjct: 146 FVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECINYYKF 205
Query: 188 SLATDMWSVGVLAYVLLS-SHSPFAG 212
S +D+WS GVL + S P+ G
Sbjct: 206 SSKSDVWSFGVLMWEAFSYGQKPYRG 231
>pdb|3TUB|A Chain A, Crystal Structure Of Syk Kinase Domain With 1-(5-(6,7-
Dimethoxyquinolin-4-Yloxy)pyridin-2-Yl)-3-((1r,2s)-2-
Phenylcyclopropyl)urea
Length = 293
Score = 61.2 bits (147), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 38/146 (26%), Positives = 71/146 (48%), Gaps = 9/146 (6%)
Query: 72 RIVGLHEIYETPHEMVLVLEMVPDGELQRLVDIQDGIPEQDTRSYMKQILEALAFLHDHN 131
R++G+ E +LV+EM G L + + + +++ + Q+ + +L + N
Sbjct: 92 RMIGICEA----ESWMLVMEMAELGPLNKYLQQNRHVKDKNIIELVHQVSMGMKYLEESN 147
Query: 132 ITHLDLKPQNILLTKDNNIKLCDFGISRVVN---DVVEVKEIIGTP-DYVAPEVLSYEPI 187
H DL +N+LL + K+ DFG+S+ + + + + P + APE ++Y
Sbjct: 148 FVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECINYYKF 207
Query: 188 SLATDMWSVGVLAYVLLS-SHSPFAG 212
S +D+WS GVL + S P+ G
Sbjct: 208 SSKSDVWSFGVLMWEAFSYGQKPYRG 233
>pdb|3VF8|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Syk Catalytic
Domain With Pyrazolylbenzimidazole Inhibitor 416
pdb|3VF9|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Syk Catalytic
Domain With Thienopyrazolylindole Inhibitor 027
pdb|3TUC|A Chain A, Crystal Structure Of Syk Kinase Domain With
1-Benzyl-N-(5-(6,7-
Dimethoxyquinolin-4-Yloxy)pyridin-2-Yl)-2-Oxo-1,
2-Dihydropyridine-3- Carboxamide
pdb|3TUD|A Chain A, Crystal Structure Of Syk Kinase Domain With
N-(4-Methyl-3-(8-Methyl-7-
Oxo-2-(Phenylamino)-7,8-Dihydropyrido[2,
3-D]pyrimidin-6-Yl)phenyl)-3- (Trifluoromethyl)benzamide
Length = 299
Score = 61.2 bits (147), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 38/146 (26%), Positives = 71/146 (48%), Gaps = 9/146 (6%)
Query: 72 RIVGLHEIYETPHEMVLVLEMVPDGELQRLVDIQDGIPEQDTRSYMKQILEALAFLHDHN 131
R++G+ E +LV+EM G L + + + +++ + Q+ + +L + N
Sbjct: 92 RMIGICEA----ESWMLVMEMAELGPLNKYLQQNRHVKDKNIIELVHQVSMGMKYLEESN 147
Query: 132 ITHLDLKPQNILLTKDNNIKLCDFGISRVVN---DVVEVKEIIGTP-DYVAPEVLSYEPI 187
H DL +N+LL + K+ DFG+S+ + + + + P + APE ++Y
Sbjct: 148 FVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECINYYKF 207
Query: 188 SLATDMWSVGVLAYVLLS-SHSPFAG 212
S +D+WS GVL + S P+ G
Sbjct: 208 SSKSDVWSFGVLMWEAFSYGQKPYRG 233
>pdb|4FL3|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
Length = 635
Score = 61.2 bits (147), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 38/146 (26%), Positives = 71/146 (48%), Gaps = 9/146 (6%)
Query: 72 RIVGLHEIYETPHEMVLVLEMVPDGELQRLVDIQDGIPEQDTRSYMKQILEALAFLHDHN 131
R++G+ E +LV+EM G L + + + +++ + Q+ + +L + N
Sbjct: 434 RMIGICEA----ESWMLVMEMAELGPLNKYLQQNRHVKDKNIIELVHQVSMGMKYLEESN 489
Query: 132 ITHLDLKPQNILLTKDNNIKLCDFGISRVVN---DVVEVKEIIGTP-DYVAPEVLSYEPI 187
H DL +N+LL + K+ DFG+S+ + + + + P + APE ++Y
Sbjct: 490 FVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECINYYKF 549
Query: 188 SLATDMWSVGVLAYVLLS-SHSPFAG 212
S +D+WS GVL + S P+ G
Sbjct: 550 SSKSDVWSFGVLMWEAFSYGQKPYRG 575
>pdb|3OMV|A Chain A, Crystal Structure Of C-Raf (Raf-1)
pdb|3OMV|B Chain B, Crystal Structure Of C-Raf (Raf-1)
Length = 307
Score = 61.2 bits (147), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 31/109 (28%), Positives = 62/109 (56%), Gaps = 6/109 (5%)
Query: 118 KQILEALAFLHDHNITHLDLKPQNILLTKDNNIKLCDFGISRV---VNDVVEVKEIIGTP 174
+Q + + +LH NI H D+K NI L + +K+ DFG++ V + +V++ G+
Sbjct: 139 RQTAQGMDYLHAKNIIHRDMKSNNIFLHEGLTVKIGDFGLATVKSRWSGSQQVEQPTGSV 198
Query: 175 DYVAPEVLSYE---PISLATDMWSVGVLAYVLLSSHSPFAGDNKQETFL 220
++APEV+ + P S +D++S G++ Y L++ P++ N ++ +
Sbjct: 199 LWMAPEVIRMQDNNPFSFQSDVYSYGIVLYELMTGELPYSHINNRDQII 247
>pdb|3VN9|A Chain A, Rifined Crystal Structure Of Non-Phosphorylated Map2k6 In
A Putative Auto-Inhibition State
Length = 340
Score = 61.2 bits (147), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 61/240 (25%), Positives = 104/240 (43%), Gaps = 14/240 (5%)
Query: 20 SRGKFASVRKCTHKITKVEYAAKFIRKRRRSMDQMQDILHEAAVLYLAQKSERIVGLHEI 79
RG + V K H + A K IR S +Q + +L + + V +
Sbjct: 60 GRGAYGVVEKMRHVPSGQIMAVKRIRATVNSQEQKR-LLMDLDISMRTVDCPFTVTFYGA 118
Query: 80 YETPHEMVLVLEMVP---DGELQRLVDIQDGIPEQDTRSYMKQILEALAFLHDH-NITHL 135
++ + +E++ D ++++D IPE I++AL LH ++ H
Sbjct: 119 LFREGDVWICMELMDTSLDKFYKQVIDKGQTIPEDILGKIAVSIVKALEHLHSKLSVIHR 178
Query: 136 DLKPQNILLTKDNNIKLCDFGISRVVNDVVEVKEIIGTPDYVAPEVLSYE----PISLAT 191
D+KP N+L+ +K+CDFGIS + D V G Y+APE ++ E S+ +
Sbjct: 179 DVKPSNVLINALGQVKMCDFGISGYLVDSVAKTIDAGCKPYMAPERINPELNQKGYSVKS 238
Query: 192 DMWSVGVLAYVLLSSHSPF--AGDNKQETFLNISQCNFSFHEDLFGHISSQAKDFIQSCL 249
D+WS+G+ L P+ G Q+ + + + D F S++ DF CL
Sbjct: 239 DIWSLGITMIELAILRFPYDSWGTPFQQLKQVVEEPSPQLPADKF---SAEFVDFTSQCL 295
>pdb|4FL2|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
Length = 636
Score = 61.2 bits (147), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 38/146 (26%), Positives = 71/146 (48%), Gaps = 9/146 (6%)
Query: 72 RIVGLHEIYETPHEMVLVLEMVPDGELQRLVDIQDGIPEQDTRSYMKQILEALAFLHDHN 131
R++G+ E +LV+EM G L + + + +++ + Q+ + +L + N
Sbjct: 435 RMIGICEA----ESWMLVMEMAELGPLNKYLQQNRHVKDKNIIELVHQVSMGMKYLEESN 490
Query: 132 ITHLDLKPQNILLTKDNNIKLCDFGISRVVN---DVVEVKEIIGTP-DYVAPEVLSYEPI 187
H DL +N+LL + K+ DFG+S+ + + + + P + APE ++Y
Sbjct: 491 FVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECINYYKF 550
Query: 188 SLATDMWSVGVLAYVLLS-SHSPFAG 212
S +D+WS GVL + S P+ G
Sbjct: 551 SSKSDVWSFGVLMWEAFSYGQKPYRG 576
>pdb|4G31|A Chain A, Crystal Structure Of Gsk6414 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.28 A Resolution
pdb|4G34|A Chain A, Crystal Structure Of Gsk6924 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.70 A Resolution
Length = 299
Score = 60.8 bits (146), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 59/225 (26%), Positives = 100/225 (44%), Gaps = 37/225 (16%)
Query: 15 IFCMPSRGKFASVRKCTHKITKVEYAAKFIR---------KRRRSMDQMQDILHEAAVLY 65
I C+ RG F V + +K+ YA K IR K R + + + H V Y
Sbjct: 10 IQCL-GRGGFGVVFEAKNKVDDCNYAIKRIRLPNRELAREKVMREVKALAKLEHPGIVRY 68
Query: 66 LAQKSERIVGLHEIYETPHEMVLVLEMVPDGELQRLVDIQDGIP-----EQDTRSY---- 116
E+ ++ + ++ L ++M +L R +++D + E+ RS
Sbjct: 69 FNAWLEKNT-TEKLQPSSPKVYLYIQM----QLCRKENLKDWMNGRCTIEERERSVCLHI 123
Query: 117 MKQILEALAFLHDHNITHLDLKPQNILLTKDNNIKLCDFGISRVVNDVVEVKEI------ 170
QI EA+ FLH + H DLKP NI T D+ +K+ DFG+ ++ E + +
Sbjct: 124 FLQIAEAVEFLHSKGLMHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQDEEEQTVLTPMPA 183
Query: 171 -------IGTPDYVAPEVLSYEPISLATDMWSVGVLAYVLLSSHS 208
+GT Y++PE + S D++S+G++ + LL S
Sbjct: 184 YARHTGQVGTKLYMSPEQIHGNSYSHKVDIFSLGLILFELLYPFS 228
>pdb|2HEL|A Chain A, Crystal Structure Of A Mutant Epha4 Kinase Domain (Y742a)
Length = 306
Score = 60.8 bits (146), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 43/178 (24%), Positives = 82/178 (46%), Gaps = 7/178 (3%)
Query: 53 QMQDILHEAAVLYLAQKSERIVGLHEIYETPHEMVLVLEMVPDGELQRLVDIQDG-IPEQ 111
Q +D L EA+++ I+ L + ++++ E + +G L + DG
Sbjct: 73 QRRDFLSEASIMGQFDHPN-IIHLEGVVTKCKPVMIITEYMENGSLDAFLRKNDGRFTVI 131
Query: 112 DTRSYMKQILEALAFLHDHNITHLDLKPQNILLTKDNNIKLCDFGISRVVNDVVEVKEII 171
++ I + +L D + H DL +NIL+ + K+ DFG+SRV+ D E
Sbjct: 132 QLVGMLRGIGSGMKYLSDMSAVHRDLAARNILVNSNLVCKVSDFGMSRVLEDDPEAAYTT 191
Query: 172 GTPD----YVAPEVLSYEPISLATDMWSVGVLAYVLLS-SHSPFAGDNKQETFLNISQ 224
+ APE ++Y + A+D+WS G++ + ++S P+ + Q+ I +
Sbjct: 192 RGGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGERPYWDMSNQDVIKAIEE 249
>pdb|2XYU|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Vuf 12058
Length = 285
Score = 60.8 bits (146), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 43/178 (24%), Positives = 82/178 (46%), Gaps = 7/178 (3%)
Query: 53 QMQDILHEAAVLYLAQKSERIVGLHEIYETPHEMVLVLEMVPDGELQRLVDIQDG-IPEQ 111
Q +D L EA+++ I+ L + ++++ E + +G L + DG
Sbjct: 52 QRRDFLSEASIMGQFDHPN-IIHLEGVVTKCKPVMIITEYMENGSLDAFLRKNDGRFTVI 110
Query: 112 DTRSYMKQILEALAFLHDHNITHLDLKPQNILLTKDNNIKLCDFGISRVVNDVVEVKEII 171
++ I + +L D + H DL +NIL+ + K+ DFG+SRV+ D E
Sbjct: 111 QLVGMLRGIGSGMKYLSDMSYVHRDLAARNILVNSNLVCKVSDFGMSRVLEDDPEAAYTT 170
Query: 172 GTPD----YVAPEVLSYEPISLATDMWSVGVLAYVLLS-SHSPFAGDNKQETFLNISQ 224
+ APE ++Y + A+D+WS G++ + ++S P+ + Q+ I +
Sbjct: 171 RGGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGERPYWDMSNQDVIKAIEE 228
>pdb|3DK3|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK3|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 60.8 bits (146), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 32/104 (30%), Positives = 57/104 (54%), Gaps = 3/104 (2%)
Query: 119 QILEALAFLHDHNITHLDLKPQNILLTKDNNIKLCDFGISRVV-NDVVEVKEIIGTP-DY 176
QI A+ +L N H DL +N L+ +++ +K+ DFG+SR++ D P +
Sbjct: 117 QISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTFTAHAGAKFPIKW 176
Query: 177 VAPEVLSYEPISLATDMWSVGVLAYVLLS-SHSPFAGDNKQETF 219
APE L+Y S+ +D+W+ GVL + + + SP+ G + + +
Sbjct: 177 TAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDPSQVY 220
>pdb|3VUL|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map
Kinase Jnk1
Length = 370
Score = 60.8 bits (146), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 43/152 (28%), Positives = 77/152 (50%), Gaps = 13/152 (8%)
Query: 71 ERIVGLHEIYETPH-------EMVLVLEMVPDGELQRLVDIQDGIPEQDTRSYM-KQILE 122
+ I+GL ++ TP ++ +V+E++ D L +++ ++ + + SY+ Q+L
Sbjct: 83 KNIIGLLNVF-TPQKSLEEFQDVYIVMELM-DANLSQVIQME---LDHERMSYLLYQMLV 137
Query: 123 ALAFLHDHNITHLDLKPQNILLTKDNNIKLCDFGISRVVNDVVEVKEIIGTPDYVAPEVL 182
+ LH I H DLKP NI++ D +K+ DFG++R + + T Y APEV+
Sbjct: 138 GIKHLHSAGIIHRDLKPSNIVVKSDATLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVI 197
Query: 183 SYEPISLATDMWSVGVLAYVLLSSHSPFAGDN 214
D+WSVGV+ ++ F G +
Sbjct: 198 LGMGYKENVDIWSVGVIMGEMIKGGVLFPGTD 229
>pdb|3DK6|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK6|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 60.8 bits (146), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 32/104 (30%), Positives = 57/104 (54%), Gaps = 3/104 (2%)
Query: 119 QILEALAFLHDHNITHLDLKPQNILLTKDNNIKLCDFGISRVV-NDVVEVKEIIGTP-DY 176
QI A+ +L N H DL +N L+ +++ +K+ DFG+SR++ D P +
Sbjct: 117 QISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTXTAHAGAKFPIKW 176
Query: 177 VAPEVLSYEPISLATDMWSVGVLAYVLLS-SHSPFAGDNKQETF 219
APE L+Y S+ +D+W+ GVL + + + SP+ G + + +
Sbjct: 177 TAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDPSQVY 220
>pdb|2Y6M|A Chain A, Crystal Structure Of Epha4 Kinase Domain
pdb|2Y6O|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Dasatinib
Length = 291
Score = 60.8 bits (146), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 43/178 (24%), Positives = 82/178 (46%), Gaps = 7/178 (3%)
Query: 53 QMQDILHEAAVLYLAQKSERIVGLHEIYETPHEMVLVLEMVPDGELQRLVDIQDG-IPEQ 111
Q +D L EA+++ I+ L + ++++ E + +G L + DG
Sbjct: 58 QRRDFLSEASIMGQFDHPN-IIHLEGVVTKCKPVMIITEYMENGSLDAFLRKNDGRFTVI 116
Query: 112 DTRSYMKQILEALAFLHDHNITHLDLKPQNILLTKDNNIKLCDFGISRVVNDVVEVKEII 171
++ I + +L D + H DL +NIL+ + K+ DFG+SRV+ D E
Sbjct: 117 QLVGMLRGIGSGMKYLSDMSYVHRDLAARNILVNSNLVCKVSDFGMSRVLEDDPEAAYTT 176
Query: 172 GTPD----YVAPEVLSYEPISLATDMWSVGVLAYVLLS-SHSPFAGDNKQETFLNISQ 224
+ APE ++Y + A+D+WS G++ + ++S P+ + Q+ I +
Sbjct: 177 RGGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGERPYWDMSNQDVIKAIEE 234
>pdb|3VUM|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M7 In Map
Kinase Jnk1
Length = 370
Score = 60.8 bits (146), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 43/150 (28%), Positives = 76/150 (50%), Gaps = 13/150 (8%)
Query: 71 ERIVGLHEIYETPH-------EMVLVLEMVPDGELQRLVDIQDGIPEQDTRSYM-KQILE 122
+ I+GL ++ TP ++ +V+E++ D L +++ ++ + + SY+ Q+L
Sbjct: 83 KNIIGLLNVF-TPQKSLEEFQDVYIVMELM-DANLSQVIQME---LDHERMSYLLYQMLV 137
Query: 123 ALAFLHDHNITHLDLKPQNILLTKDNNIKLCDFGISRVVNDVVEVKEIIGTPDYVAPEVL 182
+ LH I H DLKP NI++ D +K+ DFG++R + + T Y APEV+
Sbjct: 138 GIKHLHSAGIIHRDLKPSNIVVKSDATLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVI 197
Query: 183 SYEPISLATDMWSVGVLAYVLLSSHSPFAG 212
D+WSVGV+ ++ F G
Sbjct: 198 LGMGYKENVDIWSVGVIMGEMIKGGVLFPG 227
>pdb|3FME|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein
Kinase Kinase 6 (Mek6) Activated Mutant (S207d, T211d)
Length = 290
Score = 60.8 bits (146), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 61/240 (25%), Positives = 104/240 (43%), Gaps = 14/240 (5%)
Query: 20 SRGKFASVRKCTHKITKVEYAAKFIRKRRRSMDQMQDILHEAAVLYLAQKSERIVGLHEI 79
RG + V K H + A K IR S +Q + +L + + V +
Sbjct: 16 GRGAYGVVEKMRHVPSGQIMAVKRIRATVNSQEQKR-LLMDLDISMRTVDCPFTVTFYGA 74
Query: 80 YETPHEMVLVLEMVP---DGELQRLVDIQDGIPEQDTRSYMKQILEALAFLHDH-NITHL 135
++ + +E++ D ++++D IPE I++AL LH ++ H
Sbjct: 75 LFREGDVWICMELMDTSLDKFYKQVIDKGQTIPEDILGKIAVSIVKALEHLHSKLSVIHR 134
Query: 136 DLKPQNILLTKDNNIKLCDFGISRVVNDVVEVKEIIGTPDYVAPEVLSYE----PISLAT 191
D+KP N+L+ +K+CDFGIS + D V G Y+APE ++ E S+ +
Sbjct: 135 DVKPSNVLINALGQVKMCDFGISGYLVDDVAKDIDAGCKPYMAPERINPELNQKGYSVKS 194
Query: 192 DMWSVGVLAYVLLSSHSPF--AGDNKQETFLNISQCNFSFHEDLFGHISSQAKDFIQSCL 249
D+WS+G+ L P+ G Q+ + + + D F S++ DF CL
Sbjct: 195 DIWSLGITMIELAILRFPYDSWGTPFQQLKQVVEEPSPQLPADKF---SAEFVDFTSQCL 251
>pdb|3II5|A Chain A, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
pdb|3II5|B Chain B, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
Length = 306
Score = 60.5 bits (145), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 30/109 (27%), Positives = 63/109 (57%), Gaps = 6/109 (5%)
Query: 118 KQILEALAFLHDHNITHLDLKPQNILLTKDNNIKLCDFGISRVVNDVV---EVKEIIGTP 174
+Q + + +LH +I H DLK NI L +D +K+ DFG++ V + + +++ G+
Sbjct: 138 RQTAQGMDYLHAKSIIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSI 197
Query: 175 DYVAPEVLSYE---PISLATDMWSVGVLAYVLLSSHSPFAGDNKQETFL 220
++APEV+ + P S +D+++ G++ Y L++ P++ N ++ +
Sbjct: 198 LWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQII 246
>pdb|3D4Q|A Chain A, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3D4Q|B Chain B, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3PSB|A Chain A, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PSB|B Chain B, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PPJ|A Chain A, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPJ|B Chain B, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPK|A Chain A, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PPK|B Chain B, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PRF|A Chain A, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRF|B Chain B, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRI|A Chain A, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3PRI|B Chain B, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3Q4C|A Chain A, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3Q4C|B Chain B, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3PSD|A Chain A, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3PSD|B Chain B, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3SKC|A Chain A, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3SKC|B Chain B, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3TV4|A Chain A, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV4|B Chain B, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV6|A Chain A, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|3TV6|B Chain B, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|4E26|A Chain A, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E26|B Chain B, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E4X|A Chain A, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4E4X|B Chain B, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4G9C|A Chain A, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
pdb|4G9C|B Chain B, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
Length = 307
Score = 60.5 bits (145), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 30/109 (27%), Positives = 63/109 (57%), Gaps = 6/109 (5%)
Query: 118 KQILEALAFLHDHNITHLDLKPQNILLTKDNNIKLCDFGISRVVNDVV---EVKEIIGTP 174
+Q + + +LH +I H DLK NI L +D +K+ DFG++ V + + +++ G+
Sbjct: 139 RQTAQGMDYLHAKSIIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSI 198
Query: 175 DYVAPEVLSYE---PISLATDMWSVGVLAYVLLSSHSPFAGDNKQETFL 220
++APEV+ + P S +D+++ G++ Y L++ P++ N ++ +
Sbjct: 199 LWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQII 247
>pdb|3DK7|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK7|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 277
Score = 60.5 bits (145), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 32/104 (30%), Positives = 57/104 (54%), Gaps = 3/104 (2%)
Query: 119 QILEALAFLHDHNITHLDLKPQNILLTKDNNIKLCDFGISRVV-NDVVEVKEIIGTP-DY 176
QI A+ +L N H DL +N L+ +++ +K+ DFG+SR++ D P +
Sbjct: 117 QISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTXTAHAGAKFPIKW 176
Query: 177 VAPEVLSYEPISLATDMWSVGVLAYVLLS-SHSPFAGDNKQETF 219
APE L+Y S+ +D+W+ GVL + + + SP+ G + + +
Sbjct: 177 TAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDPSQVY 220
>pdb|2QOH|A Chain A, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|2QOH|B Chain B, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|3KF4|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KF4|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
Length = 288
Score = 60.5 bits (145), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 32/97 (32%), Positives = 54/97 (55%), Gaps = 3/97 (3%)
Query: 119 QILEALAFLHDHNITHLDLKPQNILLTKDNNIKLCDFGISRVV-NDVVEVKEIIGTP-DY 176
QI A+ +L N H DL +N L+ +++ +K+ DFG+SR++ D P +
Sbjct: 119 QISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKW 178
Query: 177 VAPEVLSYEPISLATDMWSVGVLAYVLLS-SHSPFAG 212
APE L+Y S+ +D+W+ GVL + + + SP+ G
Sbjct: 179 TAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPG 215
>pdb|1FPU|A Chain A, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1FPU|B Chain B, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1IEP|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1IEP|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1M52|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1M52|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1OPJ|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPJ|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|2HZN|A Chain A, Abl Kinase Domain In Complex With Nvp-Afg210
pdb|3K5V|A Chain A, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3K5V|B Chain B, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3MS9|A Chain A, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MS9|B Chain B, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MSS|A Chain A, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|B Chain B, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|C Chain C, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|D Chain D, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
Length = 293
Score = 60.5 bits (145), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 32/97 (32%), Positives = 54/97 (55%), Gaps = 3/97 (3%)
Query: 119 QILEALAFLHDHNITHLDLKPQNILLTKDNNIKLCDFGISRVV-NDVVEVKEIIGTP-DY 176
QI A+ +L N H DL +N L+ +++ +K+ DFG+SR++ D P +
Sbjct: 124 QISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKW 183
Query: 177 VAPEVLSYEPISLATDMWSVGVLAYVLLS-SHSPFAG 212
APE L+Y S+ +D+W+ GVL + + + SP+ G
Sbjct: 184 TAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPG 220
>pdb|2Z60|A Chain A, Crystal Structure Of The T315i Mutant Of Abl Kinase Bound
With Ppy-A
pdb|3IK3|A Chain A, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
pdb|3IK3|B Chain B, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
Length = 288
Score = 60.5 bits (145), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 32/97 (32%), Positives = 54/97 (55%), Gaps = 3/97 (3%)
Query: 119 QILEALAFLHDHNITHLDLKPQNILLTKDNNIKLCDFGISRVV-NDVVEVKEIIGTP-DY 176
QI A+ +L N H DL +N L+ +++ +K+ DFG+SR++ D P +
Sbjct: 119 QISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKW 178
Query: 177 VAPEVLSYEPISLATDMWSVGVLAYVLLS-SHSPFAG 212
APE L+Y S+ +D+W+ GVL + + + SP+ G
Sbjct: 179 TAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPG 215
>pdb|2F4J|A Chain A, Structure Of The Kinase Domain Of An Imatinib-Resistant
Abl Mutant In Complex With The Aurora Kinase Inhibitor
Vx-680
Length = 287
Score = 60.5 bits (145), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 32/97 (32%), Positives = 54/97 (55%), Gaps = 3/97 (3%)
Query: 119 QILEALAFLHDHNITHLDLKPQNILLTKDNNIKLCDFGISRVV-NDVVEVKEIIGTP-DY 176
QI A+ +L N H DL +N L+ +++ +K+ DFG+SR++ D P +
Sbjct: 120 QISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAPAGAKFPIKW 179
Query: 177 VAPEVLSYEPISLATDMWSVGVLAYVLLS-SHSPFAG 212
APE L+Y S+ +D+W+ GVL + + + SP+ G
Sbjct: 180 TAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPG 216
>pdb|2G2F|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2F|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
Length = 287
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 32/97 (32%), Positives = 54/97 (55%), Gaps = 3/97 (3%)
Query: 119 QILEALAFLHDHNITHLDLKPQNILLTKDNNIKLCDFGISRVV-NDVVEVKEIIGTP-DY 176
QI A+ +L N H DL +N L+ +++ +K+ DFG+SR++ D P +
Sbjct: 121 QISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAPAGAKFPIKW 180
Query: 177 VAPEVLSYEPISLATDMWSVGVLAYVLLS-SHSPFAG 212
APE L+Y S+ +D+W+ GVL + + + SP+ G
Sbjct: 181 TAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPG 217
>pdb|3PYY|A Chain A, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
pdb|3PYY|B Chain B, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
Length = 298
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 32/97 (32%), Positives = 54/97 (55%), Gaps = 3/97 (3%)
Query: 119 QILEALAFLHDHNITHLDLKPQNILLTKDNNIKLCDFGISRVV-NDVVEVKEIIGTP-DY 176
QI A+ +L N H DL +N L+ +++ +K+ DFG+SR++ D P +
Sbjct: 132 QISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKW 191
Query: 177 VAPEVLSYEPISLATDMWSVGVLAYVLLS-SHSPFAG 212
APE L+Y S+ +D+W+ GVL + + + SP+ G
Sbjct: 192 TAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPG 228
>pdb|3OXZ|A Chain A, Crystal Structure Of Abl Kinase Domain Bound With A
Dfg-Out Inhibitor Ap24534
Length = 284
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 32/97 (32%), Positives = 54/97 (55%), Gaps = 3/97 (3%)
Query: 119 QILEALAFLHDHNITHLDLKPQNILLTKDNNIKLCDFGISRVV-NDVVEVKEIIGTP-DY 176
QI A+ +L N H DL +N L+ +++ +K+ DFG+SR++ D P +
Sbjct: 119 QISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKW 178
Query: 177 VAPEVLSYEPISLATDMWSVGVLAYVLLS-SHSPFAG 212
APE L+Y S+ +D+W+ GVL + + + SP+ G
Sbjct: 179 TAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPG 215
>pdb|2HIW|A Chain A, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
pdb|2HIW|B Chain B, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
Length = 287
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 32/97 (32%), Positives = 54/97 (55%), Gaps = 3/97 (3%)
Query: 119 QILEALAFLHDHNITHLDLKPQNILLTKDNNIKLCDFGISRVV-NDVVEVKEIIGTP-DY 176
QI A+ +L N H DL +N L+ +++ +K+ DFG+SR++ D P +
Sbjct: 121 QISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKW 180
Query: 177 VAPEVLSYEPISLATDMWSVGVLAYVLLS-SHSPFAG 212
APE L+Y S+ +D+W+ GVL + + + SP+ G
Sbjct: 181 TAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPG 217
>pdb|4DBN|A Chain A, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
pdb|4DBN|B Chain B, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 284
Score = 60.1 bits (144), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 30/109 (27%), Positives = 63/109 (57%), Gaps = 6/109 (5%)
Query: 118 KQILEALAFLHDHNITHLDLKPQNILLTKDNNIKLCDFGISRVVNDVV---EVKEIIGTP 174
+Q + + +LH +I H DLK NI L +D +K+ DFG++ V + + +++ G+
Sbjct: 116 RQTAQGMDYLHAKSIIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSI 175
Query: 175 DYVAPEVLSYE---PISLATDMWSVGVLAYVLLSSHSPFAGDNKQETFL 220
++APEV+ + P S +D+++ G++ Y L++ P++ N ++ +
Sbjct: 176 LWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQII 224
>pdb|3Q96|A Chain A, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
pdb|3Q96|B Chain B, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
Length = 282
Score = 60.1 bits (144), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 30/109 (27%), Positives = 63/109 (57%), Gaps = 6/109 (5%)
Query: 118 KQILEALAFLHDHNITHLDLKPQNILLTKDNNIKLCDFGISRVVNDVV---EVKEIIGTP 174
+Q + + +LH +I H DLK NI L +D +K+ DFG++ V + + +++ G+
Sbjct: 113 RQTAQGMDYLHAKSIIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSI 172
Query: 175 DYVAPEVLSYE---PISLATDMWSVGVLAYVLLSSHSPFAGDNKQETFL 220
++APEV+ + P S +D+++ G++ Y L++ P++ N ++ +
Sbjct: 173 LWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQII 221
>pdb|2FB8|A Chain A, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
pdb|2FB8|B Chain B, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
Length = 281
Score = 60.1 bits (144), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 30/109 (27%), Positives = 63/109 (57%), Gaps = 6/109 (5%)
Query: 118 KQILEALAFLHDHNITHLDLKPQNILLTKDNNIKLCDFGISRVVNDVV---EVKEIIGTP 174
+Q + + +LH +I H DLK NI L +D +K+ DFG++ V + + +++ G+
Sbjct: 116 RQTAQGMDYLHAKSIIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSI 175
Query: 175 DYVAPEVLSYE---PISLATDMWSVGVLAYVLLSSHSPFAGDNKQETFL 220
++APEV+ + P S +D+++ G++ Y L++ P++ N ++ +
Sbjct: 176 LWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQII 224
>pdb|2G1T|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|C Chain C, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|D Chain D, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|3UE4|A Chain A, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
pdb|3UE4|B Chain B, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
Length = 287
Score = 60.1 bits (144), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 32/97 (32%), Positives = 54/97 (55%), Gaps = 3/97 (3%)
Query: 119 QILEALAFLHDHNITHLDLKPQNILLTKDNNIKLCDFGISRVV-NDVVEVKEIIGTP-DY 176
QI A+ +L N H DL +N L+ +++ +K+ DFG+SR++ D P +
Sbjct: 121 QISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKW 180
Query: 177 VAPEVLSYEPISLATDMWSVGVLAYVLLS-SHSPFAG 212
APE L+Y S+ +D+W+ GVL + + + SP+ G
Sbjct: 181 TAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPG 217
>pdb|1BYG|A Chain A, Kinase Domain Of Human C-Terminal Src Kinase (Csk) In
Complex With Inhibitor Staurosporine
Length = 278
Score = 60.1 bits (144), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 49/188 (26%), Positives = 88/188 (46%), Gaps = 10/188 (5%)
Query: 20 SRGKFASVRKCTHKITKVEYAAKFIRKRRRSMDQMQDILHEAAVLYLAQKSERIVGLHEI 79
+G+F V ++ KV A K I+ + Q L EA+V+ + S + L I
Sbjct: 30 GKGEFGDVMLGDYRGNKV--AVKCIKNDATA----QAFLAEASVMTQLRHSNLVQLLGVI 83
Query: 80 YETPHEMVLVLEMVPDGEL-QRLVDIQDGIPEQDTR-SYMKQILEALAFLHDHNITHLDL 137
E + +V E + G L L + D + + EA+ +L +N H DL
Sbjct: 84 VEEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEGNNFVHRDL 143
Query: 138 KPQNILLTKDNNIKLCDFGISRVVNDVVEVKEIIGTPDYVAPEVLSYEPISLATDMWSVG 197
+N+L+++DN K+ DFG+++ + + ++ + APE L + S +D+WS G
Sbjct: 144 AARNVLVSEDNVAKVSDFGLTKEASSTQDTGKL--PVKWTAPEALREKKFSTKSDVWSFG 201
Query: 198 VLAYVLLS 205
+L + + S
Sbjct: 202 ILLWEIYS 209
>pdb|2V7A|A Chain A, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
pdb|2V7A|B Chain B, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
Length = 286
Score = 60.1 bits (144), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 32/97 (32%), Positives = 54/97 (55%), Gaps = 3/97 (3%)
Query: 119 QILEALAFLHDHNITHLDLKPQNILLTKDNNIKLCDFGISRVV-NDVVEVKEIIGTP-DY 176
QI A+ +L N H DL +N L+ +++ +K+ DFG+SR++ D P +
Sbjct: 120 QISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTXTAHAGAKFPIKW 179
Query: 177 VAPEVLSYEPISLATDMWSVGVLAYVLLS-SHSPFAG 212
APE L+Y S+ +D+W+ GVL + + + SP+ G
Sbjct: 180 TAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPG 216
>pdb|2E2B|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
pdb|2E2B|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
Length = 293
Score = 60.1 bits (144), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 32/97 (32%), Positives = 54/97 (55%), Gaps = 3/97 (3%)
Query: 119 QILEALAFLHDHNITHLDLKPQNILLTKDNNIKLCDFGISRVV-NDVVEVKEIIGTP-DY 176
QI A+ +L N H DL +N L+ +++ +K+ DFG+SR++ D P +
Sbjct: 124 QISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKW 183
Query: 177 VAPEVLSYEPISLATDMWSVGVLAYVLLS-SHSPFAG 212
APE L+Y S+ +D+W+ GVL + + + SP+ G
Sbjct: 184 TAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPG 220
>pdb|2GQG|A Chain A, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
pdb|2GQG|B Chain B, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
Length = 278
Score = 60.1 bits (144), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 32/97 (32%), Positives = 54/97 (55%), Gaps = 3/97 (3%)
Query: 119 QILEALAFLHDHNITHLDLKPQNILLTKDNNIKLCDFGISRVV-NDVVEVKEIIGTP-DY 176
QI A+ +L N H DL +N L+ +++ +K+ DFG+SR++ D P +
Sbjct: 124 QISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTXTAHAGAKFPIKW 183
Query: 177 VAPEVLSYEPISLATDMWSVGVLAYVLLS-SHSPFAG 212
APE L+Y S+ +D+W+ GVL + + + SP+ G
Sbjct: 184 TAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPG 220
>pdb|2HYY|A Chain A, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|B Chain B, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|C Chain C, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|D Chain D, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HZ4|A Chain A, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|B Chain B, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|C Chain C, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
Length = 273
Score = 60.1 bits (144), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 32/97 (32%), Positives = 54/97 (55%), Gaps = 3/97 (3%)
Query: 119 QILEALAFLHDHNITHLDLKPQNILLTKDNNIKLCDFGISRVV-NDVVEVKEIIGTP-DY 176
QI A+ +L N H DL +N L+ +++ +K+ DFG+SR++ D P +
Sbjct: 119 QISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKW 178
Query: 177 VAPEVLSYEPISLATDMWSVGVLAYVLLS-SHSPFAG 212
APE L+Y S+ +D+W+ GVL + + + SP+ G
Sbjct: 179 TAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPG 215
>pdb|3QRI|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRI|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRK|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dp- 987
Length = 277
Score = 60.1 bits (144), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 32/97 (32%), Positives = 54/97 (55%), Gaps = 3/97 (3%)
Query: 119 QILEALAFLHDHNITHLDLKPQNILLTKDNNIKLCDFGISRVV-NDVVEVKEIIGTP-DY 176
QI A+ +L N H DL +N L+ +++ +K+ DFG+SR++ D P +
Sbjct: 124 QISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKW 183
Query: 177 VAPEVLSYEPISLATDMWSVGVLAYVLLS-SHSPFAG 212
APE L+Y S+ +D+W+ GVL + + + SP+ G
Sbjct: 184 TAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPG 220
>pdb|3OY3|A Chain A, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
pdb|3OY3|B Chain B, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
Length = 284
Score = 60.1 bits (144), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 32/97 (32%), Positives = 54/97 (55%), Gaps = 3/97 (3%)
Query: 119 QILEALAFLHDHNITHLDLKPQNILLTKDNNIKLCDFGISRVV-NDVVEVKEIIGTP-DY 176
QI A+ +L N H DL +N L+ +++ +K+ DFG+SR++ D P +
Sbjct: 119 QISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKW 178
Query: 177 VAPEVLSYEPISLATDMWSVGVLAYVLLS-SHSPFAG 212
APE L+Y S+ +D+W+ GVL + + + SP+ G
Sbjct: 179 TAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPG 215
>pdb|4H58|A Chain A, Braf In Complex With Compound 3
pdb|4H58|B Chain B, Braf In Complex With Compound 3
pdb|4H58|C Chain C, Braf In Complex With Compound 3
Length = 275
Score = 60.1 bits (144), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 30/109 (27%), Positives = 63/109 (57%), Gaps = 6/109 (5%)
Query: 118 KQILEALAFLHDHNITHLDLKPQNILLTKDNNIKLCDFGISRVVNDVV---EVKEIIGTP 174
+Q + + +LH +I H DLK NI L +D +K+ DFG++ V + + +++ G+
Sbjct: 111 RQTAQGMDYLHAKSIIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSI 170
Query: 175 DYVAPEVLSYE---PISLATDMWSVGVLAYVLLSSHSPFAGDNKQETFL 220
++APEV+ + P S +D+++ G++ Y L++ P++ N ++ +
Sbjct: 171 LWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQII 219
>pdb|2HZI|A Chain A, Abl Kinase Domain In Complex With Pd180970
pdb|2HZI|B Chain B, Abl Kinase Domain In Complex With Pd180970
pdb|3CS9|A Chain A, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|B Chain B, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|C Chain C, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|D Chain D, Human Abl Kinase In Complex With Nilotinib
Length = 277
Score = 60.1 bits (144), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 32/97 (32%), Positives = 54/97 (55%), Gaps = 3/97 (3%)
Query: 119 QILEALAFLHDHNITHLDLKPQNILLTKDNNIKLCDFGISRVV-NDVVEVKEIIGTP-DY 176
QI A+ +L N H DL +N L+ +++ +K+ DFG+SR++ D P +
Sbjct: 123 QISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKW 182
Query: 177 VAPEVLSYEPISLATDMWSVGVLAYVLLS-SHSPFAG 212
APE L+Y S+ +D+W+ GVL + + + SP+ G
Sbjct: 183 TAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPG 219
>pdb|1UWH|A Chain A, The Complex Of Wild Type B-Raf And Bay439006
pdb|1UWH|B Chain B, The Complex Of Wild Type B-Raf And Bay439006
Length = 276
Score = 60.1 bits (144), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 30/109 (27%), Positives = 63/109 (57%), Gaps = 6/109 (5%)
Query: 118 KQILEALAFLHDHNITHLDLKPQNILLTKDNNIKLCDFGISRVVNDVV---EVKEIIGTP 174
+Q + + +LH +I H DLK NI L +D +K+ DFG++ V + + +++ G+
Sbjct: 111 RQTAQGMDYLHAKSIIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSI 170
Query: 175 DYVAPEVLSYE---PISLATDMWSVGVLAYVLLSSHSPFAGDNKQETFL 220
++APEV+ + P S +D+++ G++ Y L++ P++ N ++ +
Sbjct: 171 LWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQII 219
>pdb|3GVU|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
Gleevec
pdb|3HMI|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
5-Amino-3-{[4-
(Aminosulfonyl)phenyl]amino}-N-(2,
6-Difluorophenyl)-1h-1,2,4- Triazole-1-Carbothioamide
pdb|2XYN|A Chain A, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|B Chain B, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|C Chain C, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
Length = 292
Score = 60.1 bits (144), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 50/176 (28%), Positives = 88/176 (50%), Gaps = 10/176 (5%)
Query: 44 IRKRRRSMDQMQDILHEAAVLYLAQKSERIVGLHEIYETPHEMVLVLEMVPDGELQRLVD 103
++ + ++++ L EAAV+ K +V L + +V E +P G L L
Sbjct: 62 VKTLKEDTMEVEEFLKEAAVM-KEIKHPNLVQLLGVCTLEPPFYIVTEYMPYGNL--LDY 118
Query: 104 IQDGIPEQDTRS---YMK-QILEALAFLHDHNITHLDLKPQNILLTKDNNIKLCDFGISR 159
+++ E+ T YM QI A+ +L N H DL +N L+ +++ +K+ DFG+SR
Sbjct: 119 LRECNREEVTAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHVVKVADFGLSR 178
Query: 160 VV-NDVVEVKEIIGTP-DYVAPEVLSYEPISLATDMWSVGVLAYVLLS-SHSPFAG 212
++ D P + APE L+Y S+ +D+W+ GVL + + + SP+ G
Sbjct: 179 LMTGDTYTAHAGAKFPIKWTAPESLAYNTFSIKSDVWAFGVLLWEIATYGMSPYPG 234
>pdb|2HZ0|A Chain A, Abl Kinase Domain In Complex With Nvp-Aeg082
pdb|2HZ0|B Chain B, Abl Kinase Domain In Complex With Nvp-Aeg082
Length = 270
Score = 60.1 bits (144), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 32/97 (32%), Positives = 54/97 (55%), Gaps = 3/97 (3%)
Query: 119 QILEALAFLHDHNITHLDLKPQNILLTKDNNIKLCDFGISRVV-NDVVEVKEIIGTP-DY 176
QI A+ +L N H DL +N L+ +++ +K+ DFG+SR++ D P +
Sbjct: 119 QISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKW 178
Query: 177 VAPEVLSYEPISLATDMWSVGVLAYVLLS-SHSPFAG 212
APE L+Y S+ +D+W+ GVL + + + SP+ G
Sbjct: 179 TAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPG 215
>pdb|1GJO|A Chain A, The Fgfr2 Tyrosine Kinase Domain
pdb|1OEC|A Chain A, Fgfr2 Kinase Domain
Length = 316
Score = 60.1 bits (144), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 47/203 (23%), Positives = 93/203 (45%), Gaps = 21/203 (10%)
Query: 37 VEYAAKFIRKRRRSMDQMQDILHEAAVLYLAQKSERIVGLHEIYETPHEMVLVLEMVPDG 96
V A K ++ D + D++ E ++ + K + I+ L + +++E G
Sbjct: 60 VTVAVKMLKDDATEKD-LSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKG 118
Query: 97 ELQRLVDIQ-----------DGIPEQ-----DTRSYMKQILEALAFLHDHNITHLDLKPQ 140
L+ + + + +PE+ D S Q+ + +L H DL +
Sbjct: 119 NLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQKCIHRDLAAR 178
Query: 141 NILLTKDNNIKLCDFGISRVVNDVVEVKEIIGTP---DYVAPEVLSYEPISLATDMWSVG 197
N+L+T++N +K+ DFG++R +N++ K+ ++APE L + +D+WS G
Sbjct: 179 NVLVTENNVMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFG 238
Query: 198 VLAYVLLS-SHSPFAGDNKQETF 219
VL + + + SP+ G +E F
Sbjct: 239 VLMWEIFTLGGSPYPGIPVEELF 261
>pdb|3RI1|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase
In Complex With Arq 069
pdb|3RI1|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase
In Complex With Arq 069
Length = 313
Score = 60.1 bits (144), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 47/203 (23%), Positives = 93/203 (45%), Gaps = 21/203 (10%)
Query: 37 VEYAAKFIRKRRRSMDQMQDILHEAAVLYLAQKSERIVGLHEIYETPHEMVLVLEMVPDG 96
V A K ++ D + D++ E ++ + K + I+ L + +++E G
Sbjct: 57 VTVAVKMLKDDATEKD-LSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKG 115
Query: 97 ELQRLVDIQ-----------DGIPEQ-----DTRSYMKQILEALAFLHDHNITHLDLKPQ 140
L+ + + + +PE+ D S Q+ + +L H DL +
Sbjct: 116 NLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQKCIHRDLAAR 175
Query: 141 NILLTKDNNIKLCDFGISRVVNDVVEVKEIIGTP---DYVAPEVLSYEPISLATDMWSVG 197
N+L+T++N +K+ DFG++R +N++ K+ ++APE L + +D+WS G
Sbjct: 176 NVLVTENNVMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFG 235
Query: 198 VLAYVLLS-SHSPFAGDNKQETF 219
VL + + + SP+ G +E F
Sbjct: 236 VLMWEIFTLGGSPYPGIPVEELF 258
>pdb|3QRJ|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
pdb|3QRJ|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
Length = 277
Score = 60.1 bits (144), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 32/97 (32%), Positives = 54/97 (55%), Gaps = 3/97 (3%)
Query: 119 QILEALAFLHDHNITHLDLKPQNILLTKDNNIKLCDFGISRVV-NDVVEVKEIIGTP-DY 176
QI A+ +L N H DL +N L+ +++ +K+ DFG+SR++ D P +
Sbjct: 124 QISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKW 183
Query: 177 VAPEVLSYEPISLATDMWSVGVLAYVLLS-SHSPFAG 212
APE L+Y S+ +D+W+ GVL + + + SP+ G
Sbjct: 184 TAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPG 220
>pdb|1K9A|A Chain A, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|B Chain B, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|C Chain C, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|D Chain D, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|E Chain E, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|F Chain F, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
Length = 450
Score = 60.1 bits (144), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 49/191 (25%), Positives = 88/191 (46%), Gaps = 16/191 (8%)
Query: 20 SRGKFASVRKCTHKITKVEYAAKFIRKRRRSMDQMQDILHEAAVLYLAQKSERIVGLHEI 79
+G+F V ++ KV A K I+ + Q L EA+V+ + S + L I
Sbjct: 202 GKGEFGDVMLGDYRGNKV--AVKCIKNDATA----QAFLAEASVMTQLRHSNLVQLLGVI 255
Query: 80 YETPHEMVLVLEMVPDGEL-----QRLVDIQDGIPEQDTRSYMKQILEALAFLHDHNITH 134
E + +V E + G L R + G + + EA+ +L +N H
Sbjct: 256 VEEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGG---DCLLKFSLDVCEAMEYLEGNNFVH 312
Query: 135 LDLKPQNILLTKDNNIKLCDFGISRVVNDVVEVKEIIGTPDYVAPEVLSYEPISLATDMW 194
DL +N+L+++DN K+ DFG+++ + + ++ + APE L + S +D+W
Sbjct: 313 RDLAARNVLVSEDNVAKVSDFGLTKEASSTQDTGKL--PVKWTAPEALREKKFSTKSDVW 370
Query: 195 SVGVLAYVLLS 205
S G+L + + S
Sbjct: 371 SFGILLWEIYS 381
>pdb|3B2T|A Chain A, Structure Of Phosphotransferase
pdb|3B2T|B Chain B, Structure Of Phosphotransferase
Length = 311
Score = 60.1 bits (144), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 47/203 (23%), Positives = 93/203 (45%), Gaps = 21/203 (10%)
Query: 37 VEYAAKFIRKRRRSMDQMQDILHEAAVLYLAQKSERIVGLHEIYETPHEMVLVLEMVPDG 96
V A K ++ D + D++ E ++ + K + I+ L + +++E G
Sbjct: 55 VTVAVKMLKDDATEKD-LSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKG 113
Query: 97 ELQRLVDIQ-----------DGIPEQ-----DTRSYMKQILEALAFLHDHNITHLDLKPQ 140
L+ + + + +PE+ D S Q+ + +L H DL +
Sbjct: 114 NLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQKCIHRDLTAR 173
Query: 141 NILLTKDNNIKLCDFGISRVVNDVVEVKEIIGTP---DYVAPEVLSYEPISLATDMWSVG 197
N+L+T++N +K+ DFG++R +N++ K+ ++APE L + +D+WS G
Sbjct: 174 NVLVTENNVMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFG 233
Query: 198 VLAYVLLS-SHSPFAGDNKQETF 219
VL + + + SP+ G +E F
Sbjct: 234 VLMWEIFTLGGSPYPGIPVEELF 256
>pdb|4EUU|A Chain A, Structure Of Bx-795 Complexed With Human Tbk1 Kinase
Domain Phosphorylated On Ser172
pdb|4EUU|B Chain B, Structure Of Bx-795 Complexed With Human Tbk1 Kinase
Domain Phosphorylated On Ser172
Length = 319
Score = 60.1 bits (144), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 55/217 (25%), Positives = 97/217 (44%), Gaps = 37/217 (17%)
Query: 20 SRGKFASVRKCTHKITKVEYAAK------FIRK---RRRSMDQMQDILHEAAVLYLAQKS 70
+G A+V + HK T +A K F+R + R + ++ + H+ V A +
Sbjct: 18 GQGATANVFRGRHKKTGDLFAIKVFNNISFLRPVDVQMREFEVLKKLNHKNIVKLFAIEE 77
Query: 71 ERIVGLHEIYETPHEMVLVLEMVPDGELQRLVDIQD---GIPEQDTRSYMKQILEALAFL 127
E T VL++E P G L +++ G+PE + ++ ++ + L
Sbjct: 78 E---------TTTRHKVLIMEFCPCGSLYTVLEEPSNAYGLPESEFLIVLRDVVGGMNHL 128
Query: 128 HDHNITHLDLKPQNIL--LTKDNN--IKLCDFGISRVVNDVVEVKEIIGTPDYVAPEVLS 183
++ I H ++KP NI+ + +D KL DFG +R + D + + GT +Y+ P++
Sbjct: 129 RENGIVHRNIKPGNIMRVIGEDGQSVYKLTDFGAARELEDDEQFVXLYGTEEYLHPDM-- 186
Query: 184 YEPISL----------ATDMWSVGVLAYVLLSSHSPF 210
YE L D+WS+GV Y + PF
Sbjct: 187 YERAVLRKDHQKKYGATVDLWSIGVTFYHAATGSLPF 223
>pdb|1ZXE|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|C Chain C, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|D Chain D, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|E Chain E, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|F Chain F, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
Length = 303
Score = 60.1 bits (144), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 63/264 (23%), Positives = 114/264 (43%), Gaps = 36/264 (13%)
Query: 20 SRGKFASVRKCTHKITKVEYAAKFIRKRRRSMDQMQDIL----------HEAAVLYLAQK 69
+G F V K + + YA I+K R + +++ IL H+ V Y A
Sbjct: 15 GQGAFGQVVKARNALDSRYYA---IKKIRHTEEKLSTILSEVXLLASLNHQYVVRYYAAW 71
Query: 70 SER--IVGLHEIYETPHEMVLVLEMVPDGELQRLVDIQDGIPEQDTRSYM-KQILEALAF 126
ER V + + + E + L L+ ++ ++D + +QILEAL++
Sbjct: 72 LERRNFVKPXTAVKKKSTLFIQXEYCENRTLYDLIHSENLNQQRDEYWRLFRQILEALSY 131
Query: 127 LHDHNITHLDLKPQNILLTKDNNIKLCDFGISRVVNDVVEVKEI---------------I 171
+H I H +LKP NI + + N+K+ DFG+++ V+ +++ ++ I
Sbjct: 132 IHSQGIIHRNLKPXNIFIDESRNVKIGDFGLAKNVHRSLDILKLDSQNLPGSSDNLTSAI 191
Query: 172 GTPDYVAPEVLSYEP-ISLATDMWSVGVLAYVLLSSHSPFA-GDNKQETFLNISQCNFSF 229
GT YVA EVL + D +S+G++ + + PF+ G + + + F
Sbjct: 192 GTAXYVATEVLDGTGHYNEKIDXYSLGIIFFEXI---YPFSTGXERVNILKKLRSVSIEF 248
Query: 230 HEDLFGHISSQAKDFIQSCLVTDP 253
D + K I+ + DP
Sbjct: 249 PPDFDDNKXKVEKKIIRLLIDHDP 272
>pdb|4EUT|A Chain A, Structure Of Bx-795 Complexed With Unphosphorylated Human
Tbk1 Kinase- Uld Domain
pdb|4EUT|B Chain B, Structure Of Bx-795 Complexed With Unphosphorylated Human
Tbk1 Kinase- Uld Domain
Length = 396
Score = 59.7 bits (143), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 55/217 (25%), Positives = 97/217 (44%), Gaps = 37/217 (17%)
Query: 20 SRGKFASVRKCTHKITKVEYAAK------FIRK---RRRSMDQMQDILHEAAVLYLAQKS 70
+G A+V + HK T +A K F+R + R + ++ + H+ V A +
Sbjct: 18 GQGATANVFRGRHKKTGDLFAIKVFNNISFLRPVDVQMREFEVLKKLNHKNIVKLFAIEE 77
Query: 71 ERIVGLHEIYETPHEMVLVLEMVPDGELQRLVDIQD---GIPEQDTRSYMKQILEALAFL 127
E T VL++E P G L +++ G+PE + ++ ++ + L
Sbjct: 78 E---------TTTRHKVLIMEFCPCGSLYTVLEEPSNAYGLPESEFLIVLRDVVGGMNHL 128
Query: 128 HDHNITHLDLKPQNIL--LTKDNN--IKLCDFGISRVVNDVVEVKEIIGTPDYVAPEVLS 183
++ I H ++KP NI+ + +D KL DFG +R + D + + GT +Y+ P++
Sbjct: 129 RENGIVHRNIKPGNIMRVIGEDGQSVYKLTDFGAARELEDDEQFVSLYGTEEYLHPDM-- 186
Query: 184 YEPISL----------ATDMWSVGVLAYVLLSSHSPF 210
YE L D+WS+GV Y + PF
Sbjct: 187 YERAVLRKDHQKKYGATVDLWSIGVTFYHAATGSLPF 223
>pdb|2PVF|A Chain A, Crystal Structure Of Tyrosine Phosphorylated Activated Fgf
Receptor 2 (Fgfr2) Kinase Domain In Complex With Atp
Analog And Substrate Peptide
Length = 334
Score = 59.7 bits (143), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 47/203 (23%), Positives = 93/203 (45%), Gaps = 21/203 (10%)
Query: 37 VEYAAKFIRKRRRSMDQMQDILHEAAVLYLAQKSERIVGLHEIYETPHEMVLVLEMVPDG 96
V A K ++ D + D++ E ++ + K + I+ L + +++E G
Sbjct: 68 VTVAVKMLKDDATEKD-LSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKG 126
Query: 97 ELQRLVDIQ-----------DGIPEQ-----DTRSYMKQILEALAFLHDHNITHLDLKPQ 140
L+ + + + +PE+ D S Q+ + +L H DL +
Sbjct: 127 NLREYLRARRPPGMEXSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQKCIHRDLAAR 186
Query: 141 NILLTKDNNIKLCDFGISRVVNDVVEVKEIIGTP---DYVAPEVLSYEPISLATDMWSVG 197
N+L+T++N +K+ DFG++R +N++ K+ ++APE L + +D+WS G
Sbjct: 187 NVLVTENNVMKIADFGLARDINNIDXXKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFG 246
Query: 198 VLAYVLLS-SHSPFAGDNKQETF 219
VL + + + SP+ G +E F
Sbjct: 247 VLMWEIFTLGGSPYPGIPVEELF 269
>pdb|3CLY|A Chain A, Crystal Structure Of Fgf Receptor 2 (Fgfr2) Kinase Domains
Trapped In Trans-Phosphorylation Reaction
Length = 334
Score = 59.7 bits (143), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 47/203 (23%), Positives = 93/203 (45%), Gaps = 21/203 (10%)
Query: 37 VEYAAKFIRKRRRSMDQMQDILHEAAVLYLAQKSERIVGLHEIYETPHEMVLVLEMVPDG 96
V A K ++ D + D++ E ++ + K + I+ L + +++E G
Sbjct: 68 VTVAVKMLKDDATEKD-LSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKG 126
Query: 97 ELQRLVDIQ-----------DGIPEQ-----DTRSYMKQILEALAFLHDHNITHLDLKPQ 140
L+ + + + +PE+ D S Q+ + +L H DL +
Sbjct: 127 NLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQKCIHRDLAAR 186
Query: 141 NILLTKDNNIKLCDFGISRVVNDVVEVKEIIGTP---DYVAPEVLSYEPISLATDMWSVG 197
N+L+T++N +K+ DFG++R +N++ K+ ++APE L + +D+WS G
Sbjct: 187 NVLVTENNVMKIADFGLARDINNIDXXKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFG 246
Query: 198 VLAYVLLS-SHSPFAGDNKQETF 219
VL + + + SP+ G +E F
Sbjct: 247 VLMWEIFTLGGSPYPGIPVEELF 269
>pdb|3D7U|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|C Chain C, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 263
Score = 59.7 bits (143), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 49/188 (26%), Positives = 88/188 (46%), Gaps = 10/188 (5%)
Query: 20 SRGKFASVRKCTHKITKVEYAAKFIRKRRRSMDQMQDILHEAAVLYLAQKSERIVGLHEI 79
+G+F V ++ KV A K I+ + Q L EA+V+ + S + L I
Sbjct: 15 GKGEFGDVMLGDYRGNKV--AVKCIKNDATA----QAFLAEASVMTQLRHSNLVQLLGVI 68
Query: 80 YETPHEMVLVLEMVPDGEL-QRLVDIQDGIPEQDTR-SYMKQILEALAFLHDHNITHLDL 137
E + +V E + G L L + D + + EA+ +L +N H DL
Sbjct: 69 VEEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEGNNFVHRDL 128
Query: 138 KPQNILLTKDNNIKLCDFGISRVVNDVVEVKEIIGTPDYVAPEVLSYEPISLATDMWSVG 197
+N+L+++DN K+ DFG+++ + + ++ + APE L + S +D+WS G
Sbjct: 129 AARNVLVSEDNVAKVSDFGLTKEASSTQDTGKL--PVKWTAPEALREKKFSTKSDVWSFG 186
Query: 198 VLAYVLLS 205
+L + + S
Sbjct: 187 ILLWEIYS 194
>pdb|3D7T|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 269
Score = 59.7 bits (143), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 49/191 (25%), Positives = 87/191 (45%), Gaps = 16/191 (8%)
Query: 20 SRGKFASVRKCTHKITKVEYAAKFIRKRRRSMDQMQDILHEAAVLYLAQKSERIVGLHEI 79
+G+F V ++ KV A K I+ + Q L EA+V+ + S + L I
Sbjct: 21 GKGEFGDVMLGDYRGNKV--AVKCIKNDATA----QAFLAEASVMTQLRHSNLVQLLGVI 74
Query: 80 YETPHEMVLVLEMVPDGEL-----QRLVDIQDGIPEQDTRSYMKQILEALAFLHDHNITH 134
E + +V E + G L R + G + + EA+ +L +N H
Sbjct: 75 VEEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGG---DCLLKFSLDVCEAMEYLEGNNFVH 131
Query: 135 LDLKPQNILLTKDNNIKLCDFGISRVVNDVVEVKEIIGTPDYVAPEVLSYEPISLATDMW 194
DL +N+L+++DN K+ DFG+++ + + ++ + APE L S +D+W
Sbjct: 132 RDLAARNVLVSEDNVAKVSDFGLTKEASSTQDTGKL--PVKWTAPEALREAAFSTKSDVW 189
Query: 195 SVGVLAYVLLS 205
S G+L + + S
Sbjct: 190 SFGILLWEIYS 200
>pdb|4E7W|A Chain A, Structure Of Gsk3 From Ustilago Maydis
Length = 394
Score = 59.7 bits (143), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 43/148 (29%), Positives = 71/148 (47%), Gaps = 21/148 (14%)
Query: 88 LVLEMVPDG---ELQRLVDIQDGIPEQDTRSYMKQILEALAFLHDHNITHLDLKPQNILL 144
LVLE VP+ + ++ +P + YM Q+L +LA++H I H D+KPQN+LL
Sbjct: 115 LVLEYVPETVYRASRHYAKLKQTMPMLLIKLYMYQLLRSLAYIHSIGICHRDIKPQNLLL 174
Query: 145 TKDNNI-KLCDFGISRVVNDVVEVKEIIGTPD--------YVAPE-VLSYEPISLATDMW 194
+ + KL DFG ++++ I G P+ Y APE + + D+W
Sbjct: 175 DPPSGVLKLIDFGSAKIL--------IAGEPNVSXICSRYYRAPELIFGATNYTTNIDIW 226
Query: 195 SVGVLAYVLLSSHSPFAGDNKQETFLNI 222
S G + L+ F G++ + + I
Sbjct: 227 STGCVMAELMQGQPLFPGESGIDQLVEI 254
>pdb|3GQI|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 47/208 (22%), Positives = 96/208 (46%), Gaps = 23/208 (11%)
Query: 32 HKITKVEYAAKFIRKRRRSMDQMQDILHEAAVLYLAQKSERIVGLHEIYETPHEMVLVLE 91
+++TKV A K ++ D + D++ E ++ + K + I+ L + +++E
Sbjct: 58 NRVTKV--AVKMLKSDATEKD-LSDLISEMEMMKMIGKHKNIINLLGACTQDGPLYVIVE 114
Query: 92 MVPDGELQRLV----------------DIQDGIPEQDTRSYMKQILEALAFLHDHNITHL 135
G L+ + + ++ + +D S Q+ + +L H
Sbjct: 115 YASKGNLREYLQARRPPGLEFSFNPSHNPEEQLSSKDLVSCAYQVARGMEYLASKKCIHR 174
Query: 136 DLKPQNILLTKDNNIKLCDFGISRVVNDVVEVKEIIGTP---DYVAPEVLSYEPISLATD 192
DL +N+L+T+DN +K+ DFG++R ++ + K+ ++APE L + +D
Sbjct: 175 DLAARNVLVTEDNVMKIADFGLARDIHHIDXXKKTTNGRLPVKWMAPEALFDRIYTHQSD 234
Query: 193 MWSVGVLAYVLLS-SHSPFAGDNKQETF 219
+WS GVL + + + SP+ G +E F
Sbjct: 235 VWSFGVLLWEIFTLGGSPYPGVPVEELF 262
>pdb|2PZP|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
pdb|2PZP|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 43/188 (22%), Positives = 88/188 (46%), Gaps = 20/188 (10%)
Query: 52 DQMQDILHEAAVLYLAQKSERIVGLHEIYETPHEMVLVLEMVPDGELQRLVDIQ------ 105
+ + D++ E ++ + K + I+ L + +++E G L+ + +
Sbjct: 82 EDLSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGME 141
Query: 106 -----DGIPEQ-----DTRSYMKQILEALAFLHDHNITHLDLKPQNILLTKDNNIKLCDF 155
+ +PE+ D S Q+ + +L H DL +N+L+T++N +K+ DF
Sbjct: 142 YSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADF 201
Query: 156 GISRVVNDVVEVKEIIGTP---DYVAPEVLSYEPISLATDMWSVGVLAYVLLS-SHSPFA 211
G++R +N++ K+ ++APE L + +D+WS GVL + + + SP+
Sbjct: 202 GLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYP 261
Query: 212 GDNKQETF 219
G +E F
Sbjct: 262 GIPVEELF 269
>pdb|3TT0|A Chain A, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
pdb|3TT0|B Chain B, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
Length = 382
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 47/208 (22%), Positives = 96/208 (46%), Gaps = 23/208 (11%)
Query: 32 HKITKVEYAAKFIRKRRRSMDQMQDILHEAAVLYLAQKSERIVGLHEIYETPHEMVLVLE 91
+++TKV A K ++ D + D++ E ++ + K + I+ L + +++E
Sbjct: 99 NRVTKV--AVKMLKSDATEKD-LSDLISEMEMMKMIGKHKNIINLLGACTQDGPLYVIVE 155
Query: 92 MVPDGELQRLV----------------DIQDGIPEQDTRSYMKQILEALAFLHDHNITHL 135
G L+ + + ++ + +D S Q+ + +L H
Sbjct: 156 YASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYLASKKCIHR 215
Query: 136 DLKPQNILLTKDNNIKLCDFGISRVVNDVVEVKEIIGTP---DYVAPEVLSYEPISLATD 192
DL +N+L+T+DN +K+ DFG++R ++ + K+ ++APE L + +D
Sbjct: 216 DLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSD 275
Query: 193 MWSVGVLAYVLLS-SHSPFAGDNKQETF 219
+WS GVL + + + SP+ G +E F
Sbjct: 276 VWSFGVLLWEIFTLGGSPYPGVPVEELF 303
>pdb|2PSQ|A Chain A, Crystal Structure Of Unphosphorylated Unactivated Wild
Type Fgf Receptor 2 (Fgfr2) Kinase Domain
pdb|2PSQ|B Chain B, Crystal Structure Of Unphosphorylated Unactivated Wild
Type Fgf Receptor 2 (Fgfr2) Kinase Domain
Length = 370
Score = 59.3 bits (142), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 47/203 (23%), Positives = 93/203 (45%), Gaps = 21/203 (10%)
Query: 37 VEYAAKFIRKRRRSMDQMQDILHEAAVLYLAQKSERIVGLHEIYETPHEMVLVLEMVPDG 96
V A K ++ D + D++ E ++ + K + I+ L + +++E G
Sbjct: 114 VTVAVKMLKDDATEKD-LSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKG 172
Query: 97 ELQRLVDIQ-----------DGIPEQ-----DTRSYMKQILEALAFLHDHNITHLDLKPQ 140
L+ + + + +PE+ D S Q+ + +L H DL +
Sbjct: 173 NLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQKCIHRDLAAR 232
Query: 141 NILLTKDNNIKLCDFGISRVVNDVVEVKEIIGTP---DYVAPEVLSYEPISLATDMWSVG 197
N+L+T++N +K+ DFG++R +N++ K+ ++APE L + +D+WS G
Sbjct: 233 NVLVTENNVMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFG 292
Query: 198 VLAYVLLS-SHSPFAGDNKQETF 219
VL + + + SP+ G +E F
Sbjct: 293 VLMWEIFTLGGSPYPGIPVEELF 315
>pdb|3KVW|A Chain A, Crystal Structure Of Dual-Specificity Tyrosine
Phosphorylation Regulated Kinase 2 (Dyrk2) In Complex
With An Indirubin Ligand
Length = 429
Score = 59.3 bits (142), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 37/104 (35%), Positives = 55/104 (52%), Gaps = 4/104 (3%)
Query: 114 RSYMKQILEALAFLHDHNITHLDLKPQNILLTKD--NNIKLCDFGISRVVNDVVEVKEII 171
R + IL+ L LH + I H DLKP+NILL + + IK+ DFG S + V I
Sbjct: 203 RKFAHSILQCLDALHKNRIIHCDLKPENILLKQQGRSGIKVIDFGSS--CYEHQRVYTXI 260
Query: 172 GTPDYVAPEVLSYEPISLATDMWSVGVLAYVLLSSHSPFAGDNK 215
+ Y APEV+ + DMWS+G + LL+ + G+++
Sbjct: 261 QSRFYRAPEVILGARYGMPIDMWSLGCILAELLTGYPLLPGEDE 304
>pdb|3K2L|A Chain A, Crystal Structure Of Dual-Specificity Tyrosine
Phosphorylation Regulated Kinase 2 (Dyrk2)
Length = 429
Score = 59.3 bits (142), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 37/104 (35%), Positives = 55/104 (52%), Gaps = 4/104 (3%)
Query: 114 RSYMKQILEALAFLHDHNITHLDLKPQNILLTKD--NNIKLCDFGISRVVNDVVEVKEII 171
R + IL+ L LH + I H DLKP+NILL + + IK+ DFG S + V I
Sbjct: 203 RKFAHSILQCLDALHKNRIIHCDLKPENILLKQQGRSGIKVIDFGSS--CYEHQRVYXXI 260
Query: 172 GTPDYVAPEVLSYEPISLATDMWSVGVLAYVLLSSHSPFAGDNK 215
+ Y APEV+ + DMWS+G + LL+ + G+++
Sbjct: 261 QSRFYRAPEVILGARYGMPIDMWSLGCILAELLTGYPLLPGEDE 304
>pdb|4AZF|A Chain A, Human Dyrk2 In Complex With Leucettine L41
Length = 417
Score = 59.3 bits (142), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 37/104 (35%), Positives = 55/104 (52%), Gaps = 4/104 (3%)
Query: 114 RSYMKQILEALAFLHDHNITHLDLKPQNILLTKD--NNIKLCDFGISRVVNDVVEVKEII 171
R + IL+ L LH + I H DLKP+NILL + + IK+ DFG S + V I
Sbjct: 203 RKFAHSILQCLDALHKNRIIHCDLKPENILLKQQGRSGIKVIDFGSS--CYEHQRVYTXI 260
Query: 172 GTPDYVAPEVLSYEPISLATDMWSVGVLAYVLLSSHSPFAGDNK 215
+ Y APEV+ + DMWS+G + LL+ + G+++
Sbjct: 261 QSRFYRAPEVILGARYGMPIDMWSLGCILAELLTGYPLLPGEDE 304
>pdb|2PVY|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|C Chain C, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|D Chain D, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome
Length = 324
Score = 59.3 bits (142), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 47/203 (23%), Positives = 92/203 (45%), Gaps = 21/203 (10%)
Query: 37 VEYAAKFIRKRRRSMDQMQDILHEAAVLYLAQKSERIVGLHEIYETPHEMVLVLEMVPDG 96
V A K ++ D + D++ E ++ + K + I+ L + +++E G
Sbjct: 68 VTVAVKMLKDDATEKD-LSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKG 126
Query: 97 ELQRLVDIQ-----------DGIPEQ-----DTRSYMKQILEALAFLHDHNITHLDLKPQ 140
L+ + + + +PE+ D S Q+ + +L H DL +
Sbjct: 127 NLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQKCIHRDLAAR 186
Query: 141 NILLTKDNNIKLCDFGISRVVNDVVEVKEIIGTP---DYVAPEVLSYEPISLATDMWSVG 197
N+L+T++N +K+ DFG++R +N++ K ++APE L + +D+WS G
Sbjct: 187 NVLVTENNVMKIADFGLARDINNIDYYKNTTNGRLPVKWMAPEALFDRVYTHQSDVWSFG 246
Query: 198 VLAYVLLS-SHSPFAGDNKQETF 219
VL + + + SP+ G +E F
Sbjct: 247 VLMWEIFTLGGSPYPGIPVEELF 269
>pdb|3C4F|A Chain A, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
pdb|3C4F|B Chain B, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
Length = 302
Score = 59.3 bits (142), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 47/208 (22%), Positives = 96/208 (46%), Gaps = 23/208 (11%)
Query: 32 HKITKVEYAAKFIRKRRRSMDQMQDILHEAAVLYLAQKSERIVGLHEIYETPHEMVLVLE 91
+++TKV A K ++ D + D++ E ++ + K + I+ L + +++E
Sbjct: 43 NRVTKV--AVKMLKSDATEKD-LSDLISEMEMMKMIGKHKNIINLLGACTQDGPLYVIVE 99
Query: 92 MVPDGELQRLV----------------DIQDGIPEQDTRSYMKQILEALAFLHDHNITHL 135
G L+ + + ++ + +D S Q+ + +L H
Sbjct: 100 YASKGNLREYLQARRPPGLEYCYNPSHNPEEQLSSKDLVSCAYQVARGMEYLASKKCIHR 159
Query: 136 DLKPQNILLTKDNNIKLCDFGISRVVNDVVEVKEIIGTP---DYVAPEVLSYEPISLATD 192
DL +N+L+T+DN +K+ DFG++R ++ + K+ ++APE L + +D
Sbjct: 160 DLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSD 219
Query: 193 MWSVGVLAYVLLS-SHSPFAGDNKQETF 219
+WS GVL + + + SP+ G +E F
Sbjct: 220 VWSFGVLLWEIFTLGGSPYPGVPVEELF 247
>pdb|3KXX|A Chain A, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|B Chain B, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|C Chain C, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|D Chain D, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
Length = 317
Score = 59.3 bits (142), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 50/208 (24%), Positives = 98/208 (47%), Gaps = 23/208 (11%)
Query: 32 HKITKVEYAAKFIRKRRRSMDQMQDILHEAAVLYLAQKSERIVGLHEIYETPHEMVLVLE 91
+++TKV A K ++ D + D++ E ++ + K + I+ L + +++E
Sbjct: 58 NRVTKV--AVKMLKSDATEKD-LSDLISEMEMMKMIGKHKNIINLLGACTQDGPLYVIVE 114
Query: 92 MVPDGELQRLVDIQD--GI---------PEQ-----DTRSYMKQILEALAFLHDHNITHL 135
G L+ + ++ G+ PE+ D S Q+ + +L H
Sbjct: 115 YASKGNLREYLQAREPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYLASKKCIHR 174
Query: 136 DLKPQNILLTKDNNIKLCDFGISRVVNDVVEVKEIIGTP---DYVAPEVLSYEPISLATD 192
DL +N+L+T+DN +K+ DFG++R ++ + K+ ++APE L + +D
Sbjct: 175 DLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSD 234
Query: 193 MWSVGVLAYVLLS-SHSPFAGDNKQETF 219
+WS GVL + + + SP+ G +E F
Sbjct: 235 VWSFGVLLWEIFTLGGSPYPGVPVEELF 262
>pdb|2PZ5|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZ5|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 59.3 bits (142), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 47/203 (23%), Positives = 93/203 (45%), Gaps = 21/203 (10%)
Query: 37 VEYAAKFIRKRRRSMDQMQDILHEAAVLYLAQKSERIVGLHEIYETPHEMVLVLEMVPDG 96
V A K ++ D + D++ E ++ + K + I+ L + +++E G
Sbjct: 68 VTVAVKMLKDDATEKD-LSDLVSEMEMMKMIGKHKNIITLLGACTQDGPLYVIVEYASKG 126
Query: 97 ELQRLVDIQ-----------DGIPEQ-----DTRSYMKQILEALAFLHDHNITHLDLKPQ 140
L+ + + + +PE+ D S Q+ + +L H DL +
Sbjct: 127 NLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQKCIHRDLAAR 186
Query: 141 NILLTKDNNIKLCDFGISRVVNDVVEVKEIIGTP---DYVAPEVLSYEPISLATDMWSVG 197
N+L+T++N +K+ DFG++R +N++ K+ ++APE L + +D+WS G
Sbjct: 187 NVLVTENNVMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFG 246
Query: 198 VLAYVLLS-SHSPFAGDNKQETF 219
VL + + + SP+ G +E F
Sbjct: 247 VLMWEIFTLGGSPYPGIPVEELF 269
>pdb|3GQL|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|B Chain B, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|C Chain C, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 58.9 bits (141), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 47/208 (22%), Positives = 96/208 (46%), Gaps = 23/208 (11%)
Query: 32 HKITKVEYAAKFIRKRRRSMDQMQDILHEAAVLYLAQKSERIVGLHEIYETPHEMVLVLE 91
+++TKV A K ++ D + D++ E ++ + K + I+ L + +++E
Sbjct: 58 NRVTKV--AVKMLKSDATEKD-LSDLISEMEMMKMIGKHKNIINLLGACTQDGPLYVIVE 114
Query: 92 MVPDGELQRLV----------------DIQDGIPEQDTRSYMKQILEALAFLHDHNITHL 135
G L+ + + ++ + +D S Q+ + +L H
Sbjct: 115 YASKGNLREYLQARRPPGLEYCYNPSHNPEEQLSSKDLVSCAYQVARGMEYLASKKCIHR 174
Query: 136 DLKPQNILLTKDNNIKLCDFGISRVVNDVVEVKEIIGTP---DYVAPEVLSYEPISLATD 192
DL +N+L+T+DN +K+ DFG++R ++ + K+ ++APE L + +D
Sbjct: 175 DLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSD 234
Query: 193 MWSVGVLAYVLLS-SHSPFAGDNKQETF 219
+WS GVL + + + SP+ G +E F
Sbjct: 235 VWSFGVLLWEIFTLGGSPYPGVPVEELF 262
>pdb|4F63|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F63|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F64|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F64|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F65|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
pdb|4F65|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
Length = 309
Score = 58.9 bits (141), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 47/208 (22%), Positives = 96/208 (46%), Gaps = 23/208 (11%)
Query: 32 HKITKVEYAAKFIRKRRRSMDQMQDILHEAAVLYLAQKSERIVGLHEIYETPHEMVLVLE 91
+++TKV A K ++ D + D++ E ++ + K + I+ L + +++E
Sbjct: 50 NRVTKV--AVKMLKSDATEKD-LSDLISEMEMMKMIGKHKNIINLLGACTQDGPLYVIVE 106
Query: 92 MVPDGELQRLV----------------DIQDGIPEQDTRSYMKQILEALAFLHDHNITHL 135
G L+ + + ++ + +D S Q+ + +L H
Sbjct: 107 YASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYLASKKCIHR 166
Query: 136 DLKPQNILLTKDNNIKLCDFGISRVVNDVVEVKEIIGTP---DYVAPEVLSYEPISLATD 192
DL +N+L+T+DN +K+ DFG++R ++ + K+ ++APE L + +D
Sbjct: 167 DLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSD 226
Query: 193 MWSVGVLAYVLLS-SHSPFAGDNKQETF 219
+WS GVL + + + SP+ G +E F
Sbjct: 227 VWSFGVLLWEIFTLGGSPYPGVPVEELF 254
>pdb|3JS2|A Chain A, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3JS2|B Chain B, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3KY2|A Chain A, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
pdb|3KY2|B Chain B, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
Length = 317
Score = 58.9 bits (141), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 47/208 (22%), Positives = 96/208 (46%), Gaps = 23/208 (11%)
Query: 32 HKITKVEYAAKFIRKRRRSMDQMQDILHEAAVLYLAQKSERIVGLHEIYETPHEMVLVLE 91
+++TKV A K ++ D + D++ E ++ + K + I+ L + +++E
Sbjct: 58 NRVTKV--AVKMLKSDATEKD-LSDLISEMEMMKMIGKHKNIINLLGACTQDGPLYVIVE 114
Query: 92 MVPDGELQRLV----------------DIQDGIPEQDTRSYMKQILEALAFLHDHNITHL 135
G L+ + + ++ + +D S Q+ + +L H
Sbjct: 115 YASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYLASKKCIHR 174
Query: 136 DLKPQNILLTKDNNIKLCDFGISRVVNDVVEVKEIIGTP---DYVAPEVLSYEPISLATD 192
DL +N+L+T+DN +K+ DFG++R ++ + K+ ++APE L + +D
Sbjct: 175 DLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSD 234
Query: 193 MWSVGVLAYVLLS-SHSPFAGDNKQETF 219
+WS GVL + + + SP+ G +E F
Sbjct: 235 VWSFGVLLWEIFTLGGSPYPGVPVEELF 262
>pdb|2QOO|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742f Triple Mutant
Length = 373
Score = 58.9 bits (141), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 39/158 (24%), Positives = 73/158 (46%), Gaps = 6/158 (3%)
Query: 53 QMQDILHEAAVLYLAQKSERIVGLHEIYETPHEMVLVLEMVPDGELQRLVDIQDG-IPEQ 111
Q +D L EA+++ I+ L + +++V E + +G L + D
Sbjct: 89 QRRDFLGEASIMGQFDHPN-IIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVI 147
Query: 112 DTRSYMKQILEALAFLHDHNITHLDLKPQNILLTKDNNIKLCDFGISRVVNDVVEVKEII 171
++ I + +L D H DL +NIL+ + K+ DFG+SRV+ D E
Sbjct: 148 QLVGMLRGIASGMKYLSDMGFVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTT 207
Query: 172 GTPD----YVAPEVLSYEPISLATDMWSVGVLAYVLLS 205
+ +PE ++Y + A+D+WS G++ + ++S
Sbjct: 208 RGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMS 245
>pdb|1FGK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGK|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1AGW|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|1AGW|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|2FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
pdb|2FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
Length = 310
Score = 58.9 bits (141), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 47/208 (22%), Positives = 96/208 (46%), Gaps = 23/208 (11%)
Query: 32 HKITKVEYAAKFIRKRRRSMDQMQDILHEAAVLYLAQKSERIVGLHEIYETPHEMVLVLE 91
+++TKV A K ++ D + D++ E ++ + K + I+ L + +++E
Sbjct: 51 NRVTKV--AVKMLKSDATEKD-LSDLISEMEMMKMIGKHKNIINLLGACTQDGPLYVIVE 107
Query: 92 MVPDGELQRLV----------------DIQDGIPEQDTRSYMKQILEALAFLHDHNITHL 135
G L+ + + ++ + +D S Q+ + +L H
Sbjct: 108 YASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYLASKKCIHR 167
Query: 136 DLKPQNILLTKDNNIKLCDFGISRVVNDVVEVKEIIGTP---DYVAPEVLSYEPISLATD 192
DL +N+L+T+DN +K+ DFG++R ++ + K+ ++APE L + +D
Sbjct: 168 DLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSD 227
Query: 193 MWSVGVLAYVLLS-SHSPFAGDNKQETF 219
+WS GVL + + + SP+ G +E F
Sbjct: 228 VWSFGVLLWEIFTLGGSPYPGVPVEELF 255
>pdb|3RHX|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
pdb|3RHX|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
Length = 306
Score = 58.9 bits (141), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 47/208 (22%), Positives = 96/208 (46%), Gaps = 23/208 (11%)
Query: 32 HKITKVEYAAKFIRKRRRSMDQMQDILHEAAVLYLAQKSERIVGLHEIYETPHEMVLVLE 91
+++TKV A K ++ D + D++ E ++ + K + I+ L + +++E
Sbjct: 47 NRVTKV--AVKMLKSDATEKD-LSDLISEMEMMKMIGKHKNIINLLGACTQDGPLYVIVE 103
Query: 92 MVPDGELQRLV----------------DIQDGIPEQDTRSYMKQILEALAFLHDHNITHL 135
G L+ + + ++ + +D S Q+ + +L H
Sbjct: 104 YASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYLASKKCIHR 163
Query: 136 DLKPQNILLTKDNNIKLCDFGISRVVNDVVEVKEIIGTP---DYVAPEVLSYEPISLATD 192
DL +N+L+T+DN +K+ DFG++R ++ + K+ ++APE L + +D
Sbjct: 164 DLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSD 223
Query: 193 MWSVGVLAYVLLS-SHSPFAGDNKQETF 219
+WS GVL + + + SP+ G +E F
Sbjct: 224 VWSFGVLLWEIFTLGGSPYPGVPVEELF 251
>pdb|3VUK|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M5 In Map
Kinase Jnk1
Length = 370
Score = 58.9 bits (141), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 42/152 (27%), Positives = 76/152 (50%), Gaps = 13/152 (8%)
Query: 71 ERIVGLHEIYETPH-------EMVLVLEMVPDGELQRLVDIQDGIPEQDTRSYM-KQILE 122
+ I+GL ++ TP ++ +V+E++ D L +++ ++ + + SY+ Q+L
Sbjct: 83 KNIIGLLNVF-TPQKSLEEFQDVYIVMELM-DANLSQVIQME---LDHERMSYLLYQMLV 137
Query: 123 ALAFLHDHNITHLDLKPQNILLTKDNNIKLCDFGISRVVNDVVEVKEIIGTPDYVAPEVL 182
+ LH I H DLKP NI++ D +K+ DFG++R + + T Y APEV+
Sbjct: 138 GIKHLHSAGIIHRDLKPSNIVVKSDATLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVI 197
Query: 183 SYEPISLATDMWSVGVLAYVLLSSHSPFAGDN 214
D+WSVG + ++ F G +
Sbjct: 198 LGMGYKENVDIWSVGCIMGEMIKGGVLFPGTD 229
>pdb|1JPA|A Chain A, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
pdb|1JPA|B Chain B, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
Length = 312
Score = 58.9 bits (141), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 43/180 (23%), Positives = 80/180 (44%), Gaps = 9/180 (5%)
Query: 53 QMQDILHEAAVLYLAQKSERIVGLHEIYETPHEMVLVLEMVPDGELQRLVDIQDG-IPEQ 111
Q +D L EA+++ ++ L + ++++ E + +G L + DG
Sbjct: 77 QRRDFLSEASIMGQFDHPN-VIHLEGVVTKSTPVMIITEFMENGSLDSFLRQNDGQFTVI 135
Query: 112 DTRSYMKQILEALAFLHDHNITHLDLKPQNILLTKDNNIKLCDFGISRVVNDVVE---VK 168
++ I + +L D N H DL +NIL+ + K+ DFG+SR + D
Sbjct: 136 QLVGMLRGIAAGMKYLADMNYVHRDLAARNILVNSNLVCKVSDFGLSRFLEDDTSDPTYT 195
Query: 169 EIIGTP---DYVAPEVLSYEPISLATDMWSVGVLAYVLLS-SHSPFAGDNKQETFLNISQ 224
+G + APE + Y + A+D+WS G++ + ++S P+ Q+ I Q
Sbjct: 196 SALGGKIPIRWTAPEAIQYRKFTSASDVWSYGIVMWEVMSYGERPYWDMTNQDVINAIEQ 255
>pdb|3LCO|A Chain A, Inhibitor Bound To A Dfg-Out Structure Of The Kinase
Domain Of Csf-1r
Length = 324
Score = 58.9 bits (141), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 46/175 (26%), Positives = 84/175 (48%), Gaps = 9/175 (5%)
Query: 85 EMVLVLEMVPDGELQRLVDIQDGIPEQ--DTRSYMKQILEALAFLHDHNITHLDLKPQNI 142
E +L + P G+ +D +DG P + D + Q+ + +AFL N H D+ +N+
Sbjct: 131 EAMLGPSLAP-GQDPEGLDKEDGRPLELRDLLHFSSQVAQGMAFLASKNCIHRDVAARNV 189
Query: 143 LLTKDNNIKLCDFGISR-VVNDV-VEVKEIIGTP-DYVAPEVLSYEPISLATDMWSVGVL 199
LLT + K+ DFG++R ++ND VK P ++APE + ++ +D+WS G+L
Sbjct: 190 LLTNGHVAKIGDFGLARDIMNDSNYIVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGIL 249
Query: 200 AYVLLS-SHSPFAGDNKQETFLNISQCNFSFHEDLFGHISSQAKDFIQSCLVTDP 253
+ + S +P+ G F + + + + F +Q+C +P
Sbjct: 250 LWEIFSLGLNPYPGILVNSKFYKLVKDGYQMAQPAFA--PKNIYSIMQACWALEP 302
>pdb|2R2P|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 5 (Epha5)
Length = 295
Score = 58.9 bits (141), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 40/158 (25%), Positives = 74/158 (46%), Gaps = 6/158 (3%)
Query: 53 QMQDILHEAAVLYLAQKSERIVGLHEIYETPHEMVLVLEMVPDGELQRLVDIQDG-IPEQ 111
Q +D L EA+++ I+ L + +++V E + +G L + DG
Sbjct: 66 QRRDFLGEASIMGQFDHPN-IIHLEGVVTKSKPVMIVTEYMENGSLDTFLKKNDGQFTVI 124
Query: 112 DTRSYMKQILEALAFLHDHNITHLDLKPQNILLTKDNNIKLCDFGISRVVNDVVEVKEII 171
++ I + +L D H DL +NIL+ + K+ DFG+SRV+ D E
Sbjct: 125 QLVGMLRGISAGMKYLSDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTT 184
Query: 172 GTPD----YVAPEVLSYEPISLATDMWSVGVLAYVLLS 205
+ APE +++ + A+D+WS G++ + ++S
Sbjct: 185 RGGKIPIRWTAPEAIAFRKFTSASDVWSYGIVMWEVVS 222
>pdb|2PZR|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZR|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 58.9 bits (141), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 46/203 (22%), Positives = 93/203 (45%), Gaps = 21/203 (10%)
Query: 37 VEYAAKFIRKRRRSMDQMQDILHEAAVLYLAQKSERIVGLHEIYETPHEMVLVLEMVPDG 96
V A K ++ D + D++ E ++ + K + I+ L + +++E G
Sbjct: 68 VTVAVKMLKDDATEKD-LSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKG 126
Query: 97 ELQRLVDIQ-----------DGIPEQ-----DTRSYMKQILEALAFLHDHNITHLDLKPQ 140
L+ + + + +PE+ D S Q+ + +L H DL +
Sbjct: 127 NLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQKCIHRDLAAR 186
Query: 141 NILLTKDNNIKLCDFGISRVVNDVVEVKEIIGTP---DYVAPEVLSYEPISLATDMWSVG 197
N+L+T++N +++ DFG++R +N++ K+ ++APE L + +D+WS G
Sbjct: 187 NVLVTENNVMRIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFG 246
Query: 198 VLAYVLLS-SHSPFAGDNKQETF 219
VL + + + SP+ G +E F
Sbjct: 247 VLMWEIFTLGGSPYPGIPVEELF 269
>pdb|2R9S|A Chain A, C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Quinoline
Inhibitor
pdb|2R9S|B Chain B, C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Quinoline
Inhibitor
Length = 356
Score = 58.9 bits (141), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 38/130 (29%), Positives = 66/130 (50%), Gaps = 5/130 (3%)
Query: 84 HEMVLVLEMVPDGELQRLVDIQDGIPEQDTRSYM-KQILEALAFLHDHNITHLDLKPQNI 142
++ LV+E++ D L +++ ++ + + SY+ Q+L + LH I H DLKP NI
Sbjct: 95 QDVYLVMELM-DANLXQVIQME---LDHERMSYLLYQMLXGIKHLHSAGIIHRDLKPSNI 150
Query: 143 LLTKDNNIKLCDFGISRVVNDVVEVKEIIGTPDYVAPEVLSYEPISLATDMWSVGVLAYV 202
++ D +K+ DFG++R + + T Y APEV+ D+WSVG +
Sbjct: 151 VVKSDXTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGE 210
Query: 203 LLSSHSPFAG 212
++ F G
Sbjct: 211 MVRHKILFPG 220
>pdb|2QON|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742a Triple Mutant
Length = 373
Score = 58.5 bits (140), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 39/158 (24%), Positives = 73/158 (46%), Gaps = 6/158 (3%)
Query: 53 QMQDILHEAAVLYLAQKSERIVGLHEIYETPHEMVLVLEMVPDGELQRLVDIQDG-IPEQ 111
Q +D L EA+++ I+ L + +++V E + +G L + D
Sbjct: 89 QRRDFLGEASIMGQFDHPN-IIRLEGVVTKSKPVMIVTEXMENGSLDSFLRKHDAQFTVI 147
Query: 112 DTRSYMKQILEALAFLHDHNITHLDLKPQNILLTKDNNIKLCDFGISRVVNDVVEVKEII 171
++ I + +L D H DL +NIL+ + K+ DFG+SRV+ D E
Sbjct: 148 QLVGMLRGIASGMKYLSDMGAVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTT 207
Query: 172 GTPD----YVAPEVLSYEPISLATDMWSVGVLAYVLLS 205
+ +PE ++Y + A+D+WS G++ + ++S
Sbjct: 208 RGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMS 245
>pdb|3VUH|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M3 In Map
Kinase Jnk1
Length = 370
Score = 58.5 bits (140), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 42/152 (27%), Positives = 76/152 (50%), Gaps = 13/152 (8%)
Query: 71 ERIVGLHEIYETPH-------EMVLVLEMVPDGELQRLVDIQDGIPEQDTRSYM-KQILE 122
+ I+GL ++ TP ++ +V+E++ D L +++ ++ + + SY+ Q+L
Sbjct: 83 KNIIGLLNVF-TPQKSLEEFQDVYIVMELM-DANLSQVIQME---LDHERMSYLLYQMLC 137
Query: 123 ALAFLHDHNITHLDLKPQNILLTKDNNIKLCDFGISRVVNDVVEVKEIIGTPDYVAPEVL 182
+ LH I H DLKP NI++ D +K+ DFG++R + + T Y APEV+
Sbjct: 138 GIKHLHSAGIIHRDLKPSNIVVKSDATLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVI 197
Query: 183 SYEPISLATDMWSVGVLAYVLLSSHSPFAGDN 214
D+WSVG + ++ F G +
Sbjct: 198 LGMGYKENVDIWSVGCIMGEMIKGGVLFPGTD 229
>pdb|3P23|A Chain A, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|B Chain B, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|C Chain C, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|D Chain D, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
Length = 432
Score = 58.5 bits (140), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 45/157 (28%), Positives = 76/157 (48%), Gaps = 24/157 (15%)
Query: 115 SYMKQILEALAFLHDHNITHLDLKPQNILLTKDN---NIK--LCDFGISRVV----NDVV 165
+ ++Q LA LH NI H DLKP NIL++ N IK + DFG+ + + +
Sbjct: 122 TLLQQTTSGLAHLHSLNIVHRDLKPHNILISMPNAHGKIKAMISDFGLCKKLAVGRHSFS 181
Query: 166 EVKEIIGTPDYVAPEVLS---YEPISLATDMWSVGVLAYVLLSSHS-PFAGDNKQETFLN 221
+ GT ++APE+LS E + D++S G + Y ++S S PF +++ +
Sbjct: 182 RRSGVPGTEGWIAPEMLSEDCKENPTYTVDIFSAGCVFYYVISEGSHPFGKSLQRQANIL 241
Query: 222 ISQCNFSF-----HEDLFGHISSQAKDFIQSCLVTDP 253
+ C+ HED+ A++ I+ + DP
Sbjct: 242 LGACSLDCLHPEKHEDVI------ARELIEKMIAMDP 272
>pdb|2PWL|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549h Mutation Responsible For
Crouzon Syndrome.
pdb|2PWL|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549h Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 58.5 bits (140), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 47/203 (23%), Positives = 93/203 (45%), Gaps = 21/203 (10%)
Query: 37 VEYAAKFIRKRRRSMDQMQDILHEAAVLYLAQKSERIVGLHEIYETPHEMVLVLEMVPDG 96
V A K ++ D + D++ E ++ + K + I+ L + +++E G
Sbjct: 68 VTVAVKMLKDDATEKD-LSDLVSEMEMMKMIGKHKNIIHLLGACTQDGPLYVIVEYASKG 126
Query: 97 ELQRLVDIQ-----------DGIPEQ-----DTRSYMKQILEALAFLHDHNITHLDLKPQ 140
L+ + + + +PE+ D S Q+ + +L H DL +
Sbjct: 127 NLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQKCIHRDLAAR 186
Query: 141 NILLTKDNNIKLCDFGISRVVNDVVEVKEIIGTP---DYVAPEVLSYEPISLATDMWSVG 197
N+L+T++N +K+ DFG++R +N++ K+ ++APE L + +D+WS G
Sbjct: 187 NVLVTENNVMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFG 246
Query: 198 VLAYVLLS-SHSPFAGDNKQETF 219
VL + + + SP+ G +E F
Sbjct: 247 VLMWEIFTLGGSPYPGIPVEELF 269
>pdb|1RJB|A Chain A, Crystal Structure Of Flt3
Length = 344
Score = 58.5 bits (140), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 38/147 (25%), Positives = 70/147 (47%), Gaps = 8/147 (5%)
Query: 111 QDTRSYMKQILEALAFLHDHNITHLDLKPQNILLTKDNNIKLCDFGISRVV----NDVVE 166
+D + Q+ + + FL + H DL +N+L+T +K+CDFG++R + N VV
Sbjct: 172 EDLLCFAYQVAKGMEFLEFKSCVHRDLAARNVLVTHGKVVKICDFGLARDIMSDSNYVVR 231
Query: 167 VKEIIGTPDYVAPEVLSYEPISLATDMWSVGVLAYVLLS-SHSPFAGDNKQETFLNISQC 225
+ ++APE L ++ +D+WS G+L + + S +P+ G F + Q
Sbjct: 232 GNARLPVK-WMAPESLFEGIYTIKSDVWSYGILLWEIFSLGVNPYPGIPVDANFYKLIQN 290
Query: 226 NFSFHEDLFGHISSQAKDFIQSCLVTD 252
F + + + + +QSC D
Sbjct: 291 GFKMDQPFYA--TEEIYIIMQSCWAFD 315
>pdb|3KVX|A Chain A, Jnk3 Bound To Aminopyrimidine Inhibitor, Sr-3562
Length = 364
Score = 58.5 bits (140), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 38/130 (29%), Positives = 66/130 (50%), Gaps = 5/130 (3%)
Query: 84 HEMVLVLEMVPDGELQRLVDIQDGIPEQDTRSYM-KQILEALAFLHDHNITHLDLKPQNI 142
++ LV+E++ D L +++ ++ + + SY+ Q+L + LH I H DLKP NI
Sbjct: 102 QDVYLVMELM-DANLXQVIQME---LDHERMSYLLYQMLXGIKHLHSAGIIHRDLKPSNI 157
Query: 143 LLTKDNNIKLCDFGISRVVNDVVEVKEIIGTPDYVAPEVLSYEPISLATDMWSVGVLAYV 202
++ D +K+ DFG++R + + T Y APEV+ D+WSVG +
Sbjct: 158 VVKSDXTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGE 217
Query: 203 LLSSHSPFAG 212
++ F G
Sbjct: 218 MVRHKILFPG 227
>pdb|3S95|A Chain A, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
pdb|3S95|B Chain B, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
Length = 310
Score = 58.5 bits (140), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 46/197 (23%), Positives = 87/197 (44%), Gaps = 21/197 (10%)
Query: 20 SRGKFASVRKCTHKIT-KVEYAAKFIRKRRRSMDQMQDILHEAAVLYLAQKSERIVGLHE 78
+G F K TH+ T +V + IR + + L E V+ + + +
Sbjct: 19 GKGCFGQAIKVTHRETGEVMVMKELIRF---DEETQRTFLKEVKVMRCLEHPNVLKFIGV 75
Query: 79 IYETPHEMVLVLEMVPDGELQRLVDIQDG-IPEQDTRSYMKQILEALAFLHDHNITHLDL 137
+Y+ + + E + G L+ ++ D P S+ K I +A+LH NI H DL
Sbjct: 76 LYKD-KRLNFITEYIKGGTLRGIIKSMDSQYPWSQRVSFAKDIASGMAYLHSMNIIHRDL 134
Query: 138 KPQNILLTKDNNIKLCDFGISRVVNDVVEVKE---------------IIGTPDYVAPEVL 182
N L+ ++ N+ + DFG++R++ D E ++G P ++APE++
Sbjct: 135 NSHNCLVRENKNVVVADFGLARLMVDEKTQPEGLRSLKKPDRKKRYTVVGNPYWMAPEMI 194
Query: 183 SYEPISLATDMWSVGVL 199
+ D++S G++
Sbjct: 195 NGRSYDEKVDVFSFGIV 211
>pdb|2PY3|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565g Mutation Responsible For
Pfeiffer Syndrome
pdb|2PY3|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565g Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 58.5 bits (140), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 33/113 (29%), Positives = 60/113 (53%), Gaps = 4/113 (3%)
Query: 111 QDTRSYMKQILEALAFLHDHNITHLDLKPQNILLTKDNNIKLCDFGISRVVNDVVEVKEI 170
+D S Q+ + +L H DL +N+L+T++N +K+ DFG++R +N++ K+
Sbjct: 157 KDLVSCTYQLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKT 216
Query: 171 IGTP---DYVAPEVLSYEPISLATDMWSVGVLAYVLLS-SHSPFAGDNKQETF 219
++APE L + +D+WS GVL + + + SP+ G +E F
Sbjct: 217 TNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEELF 269
>pdb|3LCD|A Chain A, Inhibitor Bound To A Dfg-In Structure Of The Kinase Domain
Of Csf-1r
Length = 329
Score = 58.5 bits (140), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 51/216 (23%), Positives = 98/216 (45%), Gaps = 16/216 (7%)
Query: 52 DQMQDILHEAAVLYLAQKSERIVGLHEIYETPHEMVLVLEMVPDGELQRLV--------D 103
D+ + ++ E ++ + E IV L ++++ E G+L + D
Sbjct: 91 DEKEALMSELKIMSHLGQHENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKAEADLD 150
Query: 104 IQDGIPEQ--DTRSYMKQILEALAFLHDHNITHLDLKPQNILLTKDNNIKLCDFGISR-V 160
+DG P + D + Q+ + +AFL N H D+ +N+LLT + K+ DFG++R +
Sbjct: 151 KEDGRPLELRDLLHFSSQVAQGMAFLASKNCIHRDVAARNVLLTNGHVAKIGDFGLARDI 210
Query: 161 VNDV-VEVKEIIGTP-DYVAPEVLSYEPISLATDMWSVGVLAYVLLS-SHSPFAGDNKQE 217
+ND VK P ++APE + ++ +D+WS G+L + + S +P+ G
Sbjct: 211 MNDSNYIVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFSLGLNPYPGILVNS 270
Query: 218 TFLNISQCNFSFHEDLFGHISSQAKDFIQSCLVTDP 253
F + + + + F +Q+C +P
Sbjct: 271 KFYKLVKDGYQMAQPAFA--PKNIYSIMQACWALEP 304
>pdb|2QOI|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f:y602f
Double Mutant
Length = 373
Score = 58.5 bits (140), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 39/158 (24%), Positives = 73/158 (46%), Gaps = 6/158 (3%)
Query: 53 QMQDILHEAAVLYLAQKSERIVGLHEIYETPHEMVLVLEMVPDGELQRLVDIQDG-IPEQ 111
Q +D L EA+++ I+ L + +++V E + +G L + D
Sbjct: 89 QRRDFLGEASIMGQFDHPN-IIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVI 147
Query: 112 DTRSYMKQILEALAFLHDHNITHLDLKPQNILLTKDNNIKLCDFGISRVVNDVVEVKEII 171
++ I + +L D H DL +NIL+ + K+ DFG+SRV+ D E
Sbjct: 148 QLVGMLRGIASGMKYLSDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTT 207
Query: 172 GTPD----YVAPEVLSYEPISLATDMWSVGVLAYVLLS 205
+ +PE ++Y + A+D+WS G++ + ++S
Sbjct: 208 RGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMS 245
>pdb|2QOB|A Chain A, Human Epha3 Kinase Domain, Base Structure
Length = 344
Score = 58.5 bits (140), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 39/158 (24%), Positives = 73/158 (46%), Gaps = 6/158 (3%)
Query: 53 QMQDILHEAAVLYLAQKSERIVGLHEIYETPHEMVLVLEMVPDGELQRLVDIQDG-IPEQ 111
Q +D L EA+++ I+ L + +++V E + +G L + D
Sbjct: 60 QRRDFLGEASIMGQFDHPN-IIRLEGVVTKSKPVMIVTEXMENGSLDSFLRKHDAQFTVI 118
Query: 112 DTRSYMKQILEALAFLHDHNITHLDLKPQNILLTKDNNIKLCDFGISRVVNDVVEVKEII 171
++ I + +L D H DL +NIL+ + K+ DFG+SRV+ D E
Sbjct: 119 QLVGMLRGIASGMKYLSDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTT 178
Query: 172 GTPD----YVAPEVLSYEPISLATDMWSVGVLAYVLLS 205
+ +PE ++Y + A+D+WS G++ + ++S
Sbjct: 179 RGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMS 216
>pdb|4ID7|A Chain A, Ack1 Kinase In Complex With The Inhibitor
Cis-3-[8-amino-1-(4-
Phenoxyphenyl)imidazo[1,5-a]pyrazin-3-yl]cyclobutanol
Length = 273
Score = 58.5 bits (140), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 47/179 (26%), Positives = 79/179 (44%), Gaps = 8/179 (4%)
Query: 52 DQMQDILHEAAVLYLAQKSERIVGLHEIYETPHEMVLVLEMVPDGEL-QRLVDIQDGIPE 110
+ M D + E ++ + ++ L+ + TP M +V E+ P G L RL Q
Sbjct: 53 EAMDDFIREVNAMH-SLDHRNLIRLYGVVLTP-PMKMVTELAPLGSLLDRLRKHQGHFLL 110
Query: 111 QDTRSYMKQILEALAFLHDHNITHLDLKPQNILLTKDNNIKLCDFGISRVV---NDVVEV 167
Y Q+ E + +L H DL +N+LL + +K+ DFG+ R + +D +
Sbjct: 111 GTLSRYAVQVAEGMGYLESKRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVM 170
Query: 168 KEIIGTP-DYVAPEVLSYEPISLATDMWSVGVLAYVLLS-SHSPFAGDNKQETFLNISQ 224
+E P + APE L S A+D W GV + + + P+ G N + I +
Sbjct: 171 QEHRKVPFAWCAPESLKTRTFSHASDTWMFGVTLWEMFTYGQEPWIGLNGSQILHKIDK 229
>pdb|3FI3|A Chain A, Crystal Structure Of Jnk3 With Indazole Inhibitor, Sr-3737
Length = 364
Score = 58.5 bits (140), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 38/130 (29%), Positives = 66/130 (50%), Gaps = 5/130 (3%)
Query: 84 HEMVLVLEMVPDGELQRLVDIQDGIPEQDTRSYM-KQILEALAFLHDHNITHLDLKPQNI 142
++ LV+E++ D L +++ ++ + + SY+ Q+L + LH I H DLKP NI
Sbjct: 102 QDVYLVMELM-DANLXQVIQME---LDHERMSYLLYQMLXGIKHLHSAGIIHRDLKPSNI 157
Query: 143 LLTKDNNIKLCDFGISRVVNDVVEVKEIIGTPDYVAPEVLSYEPISLATDMWSVGVLAYV 202
++ D +K+ DFG++R + + T Y APEV+ D+WSVG +
Sbjct: 158 VVKSDXTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGE 217
Query: 203 LLSSHSPFAG 212
++ F G
Sbjct: 218 MVRHKILFPG 227
>pdb|4HZR|A Chain A, Crystal Structure Of Ack1 Kinase Domain
pdb|4HZR|B Chain B, Crystal Structure Of Ack1 Kinase Domain
Length = 277
Score = 58.5 bits (140), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 47/179 (26%), Positives = 79/179 (44%), Gaps = 8/179 (4%)
Query: 52 DQMQDILHEAAVLYLAQKSERIVGLHEIYETPHEMVLVLEMVPDGEL-QRLVDIQDGIPE 110
+ M D + E ++ + ++ L+ + TP M +V E+ P G L RL Q
Sbjct: 57 EAMDDFIREVNAMH-SLDHRNLIRLYGVVLTP-PMKMVTELAPLGSLLDRLRKHQGHFLL 114
Query: 111 QDTRSYMKQILEALAFLHDHNITHLDLKPQNILLTKDNNIKLCDFGISRVV---NDVVEV 167
Y Q+ E + +L H DL +N+LL + +K+ DFG+ R + +D +
Sbjct: 115 GTLSRYAVQVAEGMGYLESKRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVM 174
Query: 168 KEIIGTP-DYVAPEVLSYEPISLATDMWSVGVLAYVLLS-SHSPFAGDNKQETFLNISQ 224
+E P + APE L S A+D W GV + + + P+ G N + I +
Sbjct: 175 QEHRKVPFAWCAPESLKTRTFSHASDTWMFGVTLWEMFTYGQEPWIGLNGSQILHKIDK 233
>pdb|2Q0B|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565a Mutation Responsible For
Pfeiffer Syndrome
pdb|2Q0B|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565a Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 58.5 bits (140), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 33/113 (29%), Positives = 60/113 (53%), Gaps = 4/113 (3%)
Query: 111 QDTRSYMKQILEALAFLHDHNITHLDLKPQNILLTKDNNIKLCDFGISRVVNDVVEVKEI 170
+D S Q+ + +L H DL +N+L+T++N +K+ DFG++R +N++ K+
Sbjct: 157 KDLVSCTYQLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKT 216
Query: 171 IGTP---DYVAPEVLSYEPISLATDMWSVGVLAYVLLS-SHSPFAGDNKQETF 219
++APE L + +D+WS GVL + + + SP+ G +E F
Sbjct: 217 TNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEELF 269
>pdb|3VUI|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map
Kinase Jnk1
Length = 370
Score = 58.5 bits (140), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 42/152 (27%), Positives = 76/152 (50%), Gaps = 13/152 (8%)
Query: 71 ERIVGLHEIYETPH-------EMVLVLEMVPDGELQRLVDIQDGIPEQDTRSYM-KQILE 122
+ I+GL ++ TP ++ +V+E++ D L +++ ++ + + SY+ Q+L
Sbjct: 83 KNIIGLLNVF-TPQKSLEEFQDVYIVMELM-DANLSQVIQME---LDHERMSYLLYQMLC 137
Query: 123 ALAFLHDHNITHLDLKPQNILLTKDNNIKLCDFGISRVVNDVVEVKEIIGTPDYVAPEVL 182
+ LH I H DLKP NI++ D +K+ DFG++R + + T Y APEV+
Sbjct: 138 GIKHLHSAGIIHRDLKPSNIVVKSDATLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVI 197
Query: 183 SYEPISLATDMWSVGVLAYVLLSSHSPFAGDN 214
D+WSVG + ++ F G +
Sbjct: 198 LGMGYKENVDIWSVGCIMGEMIKGGVLFPGTD 229
>pdb|2OGV|A Chain A, Crystal Structure Of The Autoinhibited Human C-Fms Kinase
Domain
Length = 317
Score = 58.5 bits (140), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 51/216 (23%), Positives = 98/216 (45%), Gaps = 16/216 (7%)
Query: 52 DQMQDILHEAAVLYLAQKSERIVGLHEIYETPHEMVLVLEMVPDGELQRLV--------D 103
D+ + ++ E ++ + E IV L ++++ E G+L + D
Sbjct: 83 DEKEALMSELKIMSHLGQHENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKAEADLD 142
Query: 104 IQDGIPEQ--DTRSYMKQILEALAFLHDHNITHLDLKPQNILLTKDNNIKLCDFGISR-V 160
+DG P + D + Q+ + +AFL N H D+ +N+LLT + K+ DFG++R +
Sbjct: 143 KEDGRPLELRDLLHFSSQVAQGMAFLASKNCIHRDVAARNVLLTNGHVAKIGDFGLARDI 202
Query: 161 VNDV-VEVKEIIGTP-DYVAPEVLSYEPISLATDMWSVGVLAYVLLS-SHSPFAGDNKQE 217
+ND VK P ++APE + ++ +D+WS G+L + + S +P+ G
Sbjct: 203 MNDSNYIVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFSLGLNPYPGILVNS 262
Query: 218 TFLNISQCNFSFHEDLFGHISSQAKDFIQSCLVTDP 253
F + + + + F +Q+C +P
Sbjct: 263 KFYKLVKDGYQMAQPAFA--PKNIYSIMQACWALEP 296
>pdb|1OPL|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPL|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 537
Score = 58.5 bits (140), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 31/97 (31%), Positives = 54/97 (55%), Gaps = 3/97 (3%)
Query: 119 QILEALAFLHDHNITHLDLKPQNILLTKDNNIKLCDFGISRVV-NDVVEVKEIIGTP-DY 176
QI A+ +L N H +L +N L+ +++ +K+ DFG+SR++ D P +
Sbjct: 365 QISSAMEYLEKKNFIHRNLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKW 424
Query: 177 VAPEVLSYEPISLATDMWSVGVLAYVLLS-SHSPFAG 212
APE L+Y S+ +D+W+ GVL + + + SP+ G
Sbjct: 425 TAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPG 461
>pdb|2FO0|A Chain A, Organization Of The Sh3-Sh2 Unit In Active And Inactive
Forms Of The C-Abl Tyrosine Kinase
Length = 495
Score = 58.5 bits (140), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 31/97 (31%), Positives = 54/97 (55%), Gaps = 3/97 (3%)
Query: 119 QILEALAFLHDHNITHLDLKPQNILLTKDNNIKLCDFGISRVV-NDVVEVKEIIGTP-DY 176
QI A+ +L N H +L +N L+ +++ +K+ DFG+SR++ D P +
Sbjct: 323 QISSAMEYLEKKNFIHRNLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKW 382
Query: 177 VAPEVLSYEPISLATDMWSVGVLAYVLLS-SHSPFAG 212
APE L+Y S+ +D+W+ GVL + + + SP+ G
Sbjct: 383 TAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPG 419
>pdb|3KUL|B Chain B, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 58.5 bits (140), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 39/158 (24%), Positives = 73/158 (46%), Gaps = 6/158 (3%)
Query: 53 QMQDILHEAAVLYLAQKSERIVGLHEIYETPHEMVLVLEMVPDGELQRLVDIQDG-IPEQ 111
Q +D L EA+++ I+ L + ++V E + +G L + DG
Sbjct: 93 QRRDFLSEASIMGQFDHPN-IIRLEGVVTRGRLAMIVTEYMENGSLDTFLRTHDGQFTIM 151
Query: 112 DTRSYMKQILEALAFLHDHNITHLDLKPQNILLTKDNNIKLCDFGISRVVNDVVEVKEII 171
++ + + +L D H DL +N+L+ + K+ DFG+SRV+ D +
Sbjct: 152 QLVGMLRGVGAGMRYLSDLGYVHRDLAARNVLVDSNLVCKVSDFGLSRVLEDDPDAAXTT 211
Query: 172 GTPD----YVAPEVLSYEPISLATDMWSVGVLAYVLLS 205
+ APE +++ S A+D+WS GV+ + +L+
Sbjct: 212 TGGKIPIRWTAPEAIAFRTFSSASDVWSFGVVMWEVLA 249
>pdb|2QOF|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f Mutant
Length = 373
Score = 58.5 bits (140), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 39/158 (24%), Positives = 73/158 (46%), Gaps = 6/158 (3%)
Query: 53 QMQDILHEAAVLYLAQKSERIVGLHEIYETPHEMVLVLEMVPDGELQRLVDIQDG-IPEQ 111
Q +D L EA+++ I+ L + +++V E + +G L + D
Sbjct: 89 QRRDFLGEASIMGQFDHPN-IIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVI 147
Query: 112 DTRSYMKQILEALAFLHDHNITHLDLKPQNILLTKDNNIKLCDFGISRVVNDVVEVKEII 171
++ I + +L D H DL +NIL+ + K+ DFG+SRV+ D E
Sbjct: 148 QLVGMLRGIASGMKYLSDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTT 207
Query: 172 GTPD----YVAPEVLSYEPISLATDMWSVGVLAYVLLS 205
+ +PE ++Y + A+D+WS G++ + ++S
Sbjct: 208 RGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMS 245
>pdb|2QOD|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y602f Mutant
Length = 373
Score = 58.5 bits (140), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 39/158 (24%), Positives = 73/158 (46%), Gaps = 6/158 (3%)
Query: 53 QMQDILHEAAVLYLAQKSERIVGLHEIYETPHEMVLVLEMVPDGELQRLVDIQDG-IPEQ 111
Q +D L EA+++ I+ L + +++V E + +G L + D
Sbjct: 89 QRRDFLGEASIMGQFDHPN-IIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVI 147
Query: 112 DTRSYMKQILEALAFLHDHNITHLDLKPQNILLTKDNNIKLCDFGISRVVNDVVEVKEII 171
++ I + +L D H DL +NIL+ + K+ DFG+SRV+ D E
Sbjct: 148 QLVGMLRGIASGMKYLSDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTT 207
Query: 172 GTPD----YVAPEVLSYEPISLATDMWSVGVLAYVLLS 205
+ +PE ++Y + A+D+WS G++ + ++S
Sbjct: 208 RGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMS 245
>pdb|2QO7|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Amp-Pnp Bound
pdb|2QOQ|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Base, Amp-Pnp
Bound Structure
Length = 373
Score = 58.5 bits (140), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 39/158 (24%), Positives = 73/158 (46%), Gaps = 6/158 (3%)
Query: 53 QMQDILHEAAVLYLAQKSERIVGLHEIYETPHEMVLVLEMVPDGELQRLVDIQDG-IPEQ 111
Q +D L EA+++ I+ L + +++V E + +G L + D
Sbjct: 89 QRRDFLGEASIMGQFDHPN-IIRLEGVVTKSKPVMIVTEXMENGSLDSFLRKHDAQFTVI 147
Query: 112 DTRSYMKQILEALAFLHDHNITHLDLKPQNILLTKDNNIKLCDFGISRVVNDVVEVKEII 171
++ I + +L D H DL +NIL+ + K+ DFG+SRV+ D E
Sbjct: 148 QLVGMLRGIASGMKYLSDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTT 207
Query: 172 GTPD----YVAPEVLSYEPISLATDMWSVGVLAYVLLS 205
+ +PE ++Y + A+D+WS G++ + ++S
Sbjct: 208 RGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMS 245
>pdb|4EWH|B Chain B, Co-Crystal Structure Of Ack1 With Inhibitor
pdb|4EWH|A Chain A, Co-Crystal Structure Of Ack1 With Inhibitor
Length = 275
Score = 58.5 bits (140), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 47/179 (26%), Positives = 79/179 (44%), Gaps = 8/179 (4%)
Query: 52 DQMQDILHEAAVLYLAQKSERIVGLHEIYETPHEMVLVLEMVPDGEL-QRLVDIQDGIPE 110
+ M D + E ++ + ++ L+ + TP M +V E+ P G L RL Q
Sbjct: 53 EAMDDFIREVNAMH-SLDHRNLIRLYGVVLTP-PMKMVTELAPLGSLLDRLRKHQGHFLL 110
Query: 111 QDTRSYMKQILEALAFLHDHNITHLDLKPQNILLTKDNNIKLCDFGISRVV---NDVVEV 167
Y Q+ E + +L H DL +N+LL + +K+ DFG+ R + +D +
Sbjct: 111 GTLSRYAVQVAEGMGYLESKRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHXVM 170
Query: 168 KEIIGTP-DYVAPEVLSYEPISLATDMWSVGVLAYVLLS-SHSPFAGDNKQETFLNISQ 224
+E P + APE L S A+D W GV + + + P+ G N + I +
Sbjct: 171 QEHRKVPFAWCAPESLKTRTFSHASDTWMFGVTLWEMFTYGQEPWIGLNGSQILHKIDK 229
>pdb|2QOC|A Chain A, Human Epha3 Kinase Domain, Phosphorylated, Amp-Pnp Bound
Structure
Length = 344
Score = 58.2 bits (139), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 39/158 (24%), Positives = 73/158 (46%), Gaps = 6/158 (3%)
Query: 53 QMQDILHEAAVLYLAQKSERIVGLHEIYETPHEMVLVLEMVPDGELQRLVDIQDG-IPEQ 111
Q +D L EA+++ I+ L + +++V E + +G L + D
Sbjct: 60 QRRDFLGEASIMGQFDHPN-IIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVI 118
Query: 112 DTRSYMKQILEALAFLHDHNITHLDLKPQNILLTKDNNIKLCDFGISRVVNDVVEVKEII 171
++ I + +L D H DL +NIL+ + K+ DFG+SRV+ D E
Sbjct: 119 QLVGMLRGIASGMKYLSDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTT 178
Query: 172 GTPD----YVAPEVLSYEPISLATDMWSVGVLAYVLLS 205
+ +PE ++Y + A+D+WS G++ + ++S
Sbjct: 179 RGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMS 216
>pdb|3DZQ|A Chain A, Human Epha3 Kinase Domain In Complex With Inhibitor
Awl-Ii- 38.3
pdb|4G2F|A Chain A, Human Epha3 Kinase Domain In Complex With Compound 7
pdb|4GK2|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 66
pdb|4GK3|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 87
pdb|4GK4|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 90
Length = 361
Score = 58.2 bits (139), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 39/158 (24%), Positives = 73/158 (46%), Gaps = 6/158 (3%)
Query: 53 QMQDILHEAAVLYLAQKSERIVGLHEIYETPHEMVLVLEMVPDGELQRLVDIQDG-IPEQ 111
Q +D L EA+++ I+ L + +++V E + +G L + D
Sbjct: 77 QRRDFLGEASIMGQFDHPN-IIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVI 135
Query: 112 DTRSYMKQILEALAFLHDHNITHLDLKPQNILLTKDNNIKLCDFGISRVVNDVVEVKEII 171
++ I + +L D H DL +NIL+ + K+ DFG+SRV+ D E
Sbjct: 136 QLVGMLRGIASGMKYLSDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTT 195
Query: 172 GTPD----YVAPEVLSYEPISLATDMWSVGVLAYVLLS 205
+ +PE ++Y + A+D+WS G++ + ++S
Sbjct: 196 RGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMS 233
>pdb|1U54|A Chain A, Crystal Structures Of The Phosphorylated And
Unphosphorylated Kinase Domains Of The Cdc42-Associated
Tyrosine Kinase Ack1 Bound To Amp-Pcp
Length = 291
Score = 58.2 bits (139), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 47/179 (26%), Positives = 79/179 (44%), Gaps = 8/179 (4%)
Query: 52 DQMQDILHEAAVLYLAQKSERIVGLHEIYETPHEMVLVLEMVPDGEL-QRLVDIQDGIPE 110
+ M D + E ++ + ++ L+ + TP M +V E+ P G L RL Q
Sbjct: 63 EAMDDFIREVNAMH-SLDHRNLIRLYGVVLTP-PMKMVTELAPLGSLLDRLRKHQGHFLL 120
Query: 111 QDTRSYMKQILEALAFLHDHNITHLDLKPQNILLTKDNNIKLCDFGISRVV---NDVVEV 167
Y Q+ E + +L H DL +N+LL + +K+ DFG+ R + +D +
Sbjct: 121 GTLSRYAVQVAEGMGYLESKRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHXVM 180
Query: 168 KEIIGTP-DYVAPEVLSYEPISLATDMWSVGVLAYVLLS-SHSPFAGDNKQETFLNISQ 224
+E P + APE L S A+D W GV + + + P+ G N + I +
Sbjct: 181 QEHRKVPFAWCAPESLKTRTFSHASDTWMFGVTLWEMFTYGQEPWIGLNGSQILHKIDK 239
>pdb|2GSF|A Chain A, The Human Epha3 Receptor Tyrosine Kinase And Juxtamembrane
Region
pdb|2QO2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Apo Structure
pdb|2QO9|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Phosphorylated, Amp-pnp Bound
Length = 373
Score = 58.2 bits (139), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 39/158 (24%), Positives = 73/158 (46%), Gaps = 6/158 (3%)
Query: 53 QMQDILHEAAVLYLAQKSERIVGLHEIYETPHEMVLVLEMVPDGELQRLVDIQDG-IPEQ 111
Q +D L EA+++ I+ L + +++V E + +G L + D
Sbjct: 89 QRRDFLGEASIMGQFDHPN-IIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVI 147
Query: 112 DTRSYMKQILEALAFLHDHNITHLDLKPQNILLTKDNNIKLCDFGISRVVNDVVEVKEII 171
++ I + +L D H DL +NIL+ + K+ DFG+SRV+ D E
Sbjct: 148 QLVGMLRGIASGMKYLSDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTT 207
Query: 172 GTPD----YVAPEVLSYEPISLATDMWSVGVLAYVLLS 205
+ +PE ++Y + A+D+WS G++ + ++S
Sbjct: 208 RGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMS 245
>pdb|1OPK|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 495
Score = 58.2 bits (139), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 31/97 (31%), Positives = 54/97 (55%), Gaps = 3/97 (3%)
Query: 119 QILEALAFLHDHNITHLDLKPQNILLTKDNNIKLCDFGISRVV-NDVVEVKEIIGTP-DY 176
QI A+ +L N H +L +N L+ +++ +K+ DFG+SR++ D P +
Sbjct: 326 QISSAMEYLEKKNFIHRNLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKW 385
Query: 177 VAPEVLSYEPISLATDMWSVGVLAYVLLS-SHSPFAG 212
APE L+Y S+ +D+W+ GVL + + + SP+ G
Sbjct: 386 TAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPG 422
>pdb|3FXX|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnye[ptyr]iw
pdb|3FY2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnyefiw
Length = 371
Score = 58.2 bits (139), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 39/158 (24%), Positives = 73/158 (46%), Gaps = 6/158 (3%)
Query: 53 QMQDILHEAAVLYLAQKSERIVGLHEIYETPHEMVLVLEMVPDGELQRLVDIQDG-IPEQ 111
Q +D L EA+++ I+ L + +++V E + +G L + D
Sbjct: 87 QRRDFLGEASIMGQFDHPN-IIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVI 145
Query: 112 DTRSYMKQILEALAFLHDHNITHLDLKPQNILLTKDNNIKLCDFGISRVVNDVVEVKEII 171
++ I + +L D H DL +NIL+ + K+ DFG+SRV+ D E
Sbjct: 146 QLVGMLRGIASGMKYLSDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTT 205
Query: 172 GTPD----YVAPEVLSYEPISLATDMWSVGVLAYVLLS 205
+ +PE ++Y + A+D+WS G++ + ++S
Sbjct: 206 RGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMS 243
>pdb|3VUG|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map
Kinase Jnk1
Length = 370
Score = 58.2 bits (139), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 42/152 (27%), Positives = 76/152 (50%), Gaps = 13/152 (8%)
Query: 71 ERIVGLHEIYETPH-------EMVLVLEMVPDGELQRLVDIQDGIPEQDTRSYM-KQILE 122
+ I+GL ++ TP ++ +V+E++ D L +++ ++ + + SY+ Q+L
Sbjct: 83 KNIIGLLNVF-TPQKSLEEFQDVYIVMELM-DANLSQVIQME---LDHERMSYLLYQMLC 137
Query: 123 ALAFLHDHNITHLDLKPQNILLTKDNNIKLCDFGISRVVNDVVEVKEIIGTPDYVAPEVL 182
+ LH I H DLKP NI++ D +K+ DFG++R + + T Y APEV+
Sbjct: 138 GIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVI 197
Query: 183 SYEPISLATDMWSVGVLAYVLLSSHSPFAGDN 214
D+WSVG + ++ F G +
Sbjct: 198 LGMGYKENVDIWSVGCIMGEMIKGGVLFPGTD 229
>pdb|4G9R|A Chain A, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
pdb|4G9R|B Chain B, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
Length = 307
Score = 58.2 bits (139), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 29/109 (26%), Positives = 62/109 (56%), Gaps = 6/109 (5%)
Query: 118 KQILEALAFLHDHNITHLDLKPQNILLTKDNNIKLCDFGIS---RVVNDVVEVKEIIGTP 174
+Q + + +LH +I H DLK NI L +D +K+ DFG++ + + +++ G+
Sbjct: 139 RQTAQGMDYLHAKSIIHRDLKSNNIFLHEDLTVKIGDFGLATEKSRWSGSHQFEQLSGSI 198
Query: 175 DYVAPEVLSYE---PISLATDMWSVGVLAYVLLSSHSPFAGDNKQETFL 220
++APEV+ + P S +D+++ G++ Y L++ P++ N ++ +
Sbjct: 199 LWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQII 247
>pdb|1U46|A Chain A, Crystal Structure Of The Unphosphorylated Kinase Domain Of
The Tyrosine Kinase Ack1
pdb|1U46|B Chain B, Crystal Structure Of The Unphosphorylated Kinase Domain Of
The Tyrosine Kinase Ack1
pdb|1U4D|A Chain A, Structure Of The Ack1 Kinase Domain Bound To
Debromohymenialdisine
pdb|1U4D|B Chain B, Structure Of The Ack1 Kinase Domain Bound To
Debromohymenialdisine
pdb|1U54|B Chain B, Crystal Structures Of The Phosphorylated And
Unphosphorylated Kinase Domains Of The Cdc42-Associated
Tyrosine Kinase Ack1 Bound To Amp-Pcp
Length = 291
Score = 58.2 bits (139), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 47/179 (26%), Positives = 79/179 (44%), Gaps = 8/179 (4%)
Query: 52 DQMQDILHEAAVLYLAQKSERIVGLHEIYETPHEMVLVLEMVPDGEL-QRLVDIQDGIPE 110
+ M D + E ++ + ++ L+ + TP M +V E+ P G L RL Q
Sbjct: 63 EAMDDFIREVNAMH-SLDHRNLIRLYGVVLTP-PMKMVTELAPLGSLLDRLRKHQGHFLL 120
Query: 111 QDTRSYMKQILEALAFLHDHNITHLDLKPQNILLTKDNNIKLCDFGISRVV---NDVVEV 167
Y Q+ E + +L H DL +N+LL + +K+ DFG+ R + +D +
Sbjct: 121 GTLSRYAVQVAEGMGYLESKRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVM 180
Query: 168 KEIIGTP-DYVAPEVLSYEPISLATDMWSVGVLAYVLLS-SHSPFAGDNKQETFLNISQ 224
+E P + APE L S A+D W GV + + + P+ G N + I +
Sbjct: 181 QEHRKVPFAWCAPESLKTRTFSHASDTWMFGVTLWEMFTYGQEPWIGLNGSQILHKIDK 239
>pdb|3EQP|B Chain B, Crystal Structure Of Ack1 With Compound T95
pdb|3EQP|A Chain A, Crystal Structure Of Ack1 With Compound T95
pdb|3EQR|A Chain A, Crystal Structure Of Ack1 With Compound T74
pdb|3EQR|B Chain B, Crystal Structure Of Ack1 With Compound T74
Length = 276
Score = 58.2 bits (139), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 47/179 (26%), Positives = 79/179 (44%), Gaps = 8/179 (4%)
Query: 52 DQMQDILHEAAVLYLAQKSERIVGLHEIYETPHEMVLVLEMVPDGEL-QRLVDIQDGIPE 110
+ M D + E ++ + ++ L+ + TP M +V E+ P G L RL Q
Sbjct: 53 EAMDDFIREVNAMH-SLDHRNLIRLYGVVLTP-PMKMVTELAPLGSLLDRLRKHQGHFLL 110
Query: 111 QDTRSYMKQILEALAFLHDHNITHLDLKPQNILLTKDNNIKLCDFGISRVV---NDVVEV 167
Y Q+ E + +L H DL +N+LL + +K+ DFG+ R + +D +
Sbjct: 111 GTLSRYAVQVAEGMGYLESKRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVM 170
Query: 168 KEIIGTP-DYVAPEVLSYEPISLATDMWSVGVLAYVLLS-SHSPFAGDNKQETFLNISQ 224
+E P + APE L S A+D W GV + + + P+ G N + I +
Sbjct: 171 QEHRKVPFAWCAPESLKTRTFSHASDTWMFGVTLWEMFTYGQEPWIGLNGSQILHKIDK 229
>pdb|2NRY|A Chain A, Crystal Structure Of Irak-4
pdb|2NRY|B Chain B, Crystal Structure Of Irak-4
pdb|2NRY|C Chain C, Crystal Structure Of Irak-4
pdb|2NRY|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 58.2 bits (139), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 42/135 (31%), Positives = 66/135 (48%), Gaps = 7/135 (5%)
Query: 71 ERIVGLHEIYETPHEMVLVLEMVPDGELQRLVDIQDGIP--EQDTRSYMKQ-ILEALAFL 127
E +V L ++ LV +P+G L + DG P R + Q + FL
Sbjct: 90 ENLVELLGFSSDGDDLCLVYVYMPNGSLLDRLSCLDGTPPLSWHMRCKIAQGAANGINFL 149
Query: 128 HDHNITHLDLKPQNILLTKDNNIKLCDFGISRVVNDVVEV---KEIIGTPDYVAPEVLSY 184
H+++ H D+K NILL + K+ DFG++R + I+GT Y+APE L
Sbjct: 150 HENHHIHRDIKSANILLDEAFTAKISDFGLARASEKFAQTVMXSRIVGTTAYMAPEALRG 209
Query: 185 EPISLATDMWSVGVL 199
E I+ +D++S GV+
Sbjct: 210 E-ITPKSDIYSFGVV 223
>pdb|4HZS|A Chain A, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|B Chain B, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|C Chain C, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|D Chain D, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
Length = 341
Score = 58.2 bits (139), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 47/179 (26%), Positives = 79/179 (44%), Gaps = 8/179 (4%)
Query: 52 DQMQDILHEAAVLYLAQKSERIVGLHEIYETPHEMVLVLEMVPDGEL-QRLVDIQDGIPE 110
+ M D + E ++ + ++ L+ + TP M +V E+ P G L RL Q
Sbjct: 57 EAMDDFIREVNAMH-SLDHRNLIRLYGVVLTP-PMKMVTELAPLGSLLDRLRKHQGHFLL 114
Query: 111 QDTRSYMKQILEALAFLHDHNITHLDLKPQNILLTKDNNIKLCDFGISRVV---NDVVEV 167
Y Q+ E + +L H DL +N+LL + +K+ DFG+ R + +D +
Sbjct: 115 GTLSRYAVQVAEGMGYLESKRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVM 174
Query: 168 KEIIGTP-DYVAPEVLSYEPISLATDMWSVGVLAYVLLS-SHSPFAGDNKQETFLNISQ 224
+E P + APE L S A+D W GV + + + P+ G N + I +
Sbjct: 175 QEHRKVPFAWCAPESLKTRTFSHASDTWMFGVTLWEMFTYGQEPWIGLNGSQILHKIDK 233
>pdb|3IDP|A Chain A, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
pdb|3IDP|B Chain B, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
Length = 300
Score = 57.8 bits (138), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 29/109 (26%), Positives = 62/109 (56%), Gaps = 6/109 (5%)
Query: 118 KQILEALAFLHDHNITHLDLKPQNILLTKDNNIKLCDFGIS---RVVNDVVEVKEIIGTP 174
+Q + + +LH +I H DLK NI L +D +K+ DFG++ + + +++ G+
Sbjct: 131 RQTAQGMDYLHAKSIIHRDLKSNNIFLHEDLTVKIGDFGLATEKSRWSGSHQFEQLSGSI 190
Query: 175 DYVAPEVLSYE---PISLATDMWSVGVLAYVLLSSHSPFAGDNKQETFL 220
++APEV+ + P S +D+++ G++ Y L++ P++ N ++ +
Sbjct: 191 LWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQII 239
>pdb|3ENM|A Chain A, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|B Chain B, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|C Chain C, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|D Chain D, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
Length = 316
Score = 57.8 bits (138), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 46/158 (29%), Positives = 73/158 (46%), Gaps = 10/158 (6%)
Query: 99 QRLVDIQDGIPEQDTRSYMKQILEALAFLHDH-NITHLDLKPQNILLTKDNNIKLCDFGI 157
++++D IPE I++AL LH ++ H D+KP N+L+ +K CDFGI
Sbjct: 124 KQVIDKGQTIPEDILGKIAVSIVKALEHLHSKLSVIHRDVKPSNVLINALGQVKXCDFGI 183
Query: 158 SRVVNDVVEVKEIIGTPDYVAPEVLSYE----PISLATDMWSVGVLAYVLLSSHSPF--A 211
S + D V G Y APE ++ E S+ +D+WS+G+ L P+
Sbjct: 184 SGYLVDDVAKDIDAGCKPYXAPERINPELNQKGYSVKSDIWSLGITXIELAILRFPYDSW 243
Query: 212 GDNKQETFLNISQCNFSFHEDLFGHISSQAKDFIQSCL 249
G Q+ + + + D F S++ DF CL
Sbjct: 244 GTPFQQLKQVVEEPSPQLPADKF---SAEFVDFTSQCL 278
>pdb|3CJF|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
3,4,5-Trimethoxy Aniline Containing Pyrimidine
Length = 309
Score = 57.8 bits (138), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 37/117 (31%), Positives = 56/117 (47%), Gaps = 22/117 (18%)
Query: 116 YMKQILEALAFLHDHNITHLDLKPQNILLTKDNNIKLCDFGISRVVNDVVEVKEIIGTPD 175
Y Q+ + + FL H DL +NILL++ N +K+ DFG++R +I PD
Sbjct: 149 YSFQVAKGMEFLASRKXIHRDLAARNILLSEKNVVKIXDFGLAR---------DIYKDPD 199
Query: 176 YV------------APEVLSYEPISLATDMWSVGVLAYVLLS-SHSPFAGDNKQETF 219
YV APE + ++ +D+WS GVL + + S SP+ G E F
Sbjct: 200 YVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEF 256
>pdb|2NRU|A Chain A, Crystal Structure Of Irak-4
pdb|2NRU|B Chain B, Crystal Structure Of Irak-4
pdb|2NRU|C Chain C, Crystal Structure Of Irak-4
pdb|2NRU|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 57.8 bits (138), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 42/135 (31%), Positives = 66/135 (48%), Gaps = 7/135 (5%)
Query: 71 ERIVGLHEIYETPHEMVLVLEMVPDGELQRLVDIQDGIP--EQDTRSYMKQ-ILEALAFL 127
E +V L ++ LV +P+G L + DG P R + Q + FL
Sbjct: 90 ENLVELLGFSSDGDDLCLVYVYMPNGSLLDRLSCLDGTPPLSWHMRCKIAQGAANGINFL 149
Query: 128 HDHNITHLDLKPQNILLTKDNNIKLCDFGISRVVNDVVEV---KEIIGTPDYVAPEVLSY 184
H+++ H D+K NILL + K+ DFG++R + I+GT Y+APE L
Sbjct: 150 HENHHIHRDIKSANILLDEAFTAKISDFGLARASEKFAQTVMXXRIVGTTAYMAPEALRG 209
Query: 185 EPISLATDMWSVGVL 199
E I+ +D++S GV+
Sbjct: 210 E-ITPKSDIYSFGVV 223
>pdb|3KUL|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 57.8 bits (138), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 39/158 (24%), Positives = 73/158 (46%), Gaps = 6/158 (3%)
Query: 53 QMQDILHEAAVLYLAQKSERIVGLHEIYETPHEMVLVLEMVPDGELQRLVDIQDG-IPEQ 111
Q +D L EA+++ I+ L + ++V E + +G L + DG
Sbjct: 93 QRRDFLSEASIMGQFDHPN-IIRLEGVVTRGRLAMIVTEYMENGSLDTFLRTHDGQFTIM 151
Query: 112 DTRSYMKQILEALAFLHDHNITHLDLKPQNILLTKDNNIKLCDFGISRVVNDVVEVKEII 171
++ + + +L D H DL +N+L+ + K+ DFG+SRV+ D +
Sbjct: 152 QLVGMLRGVGAGMRYLSDLGYVHRDLAARNVLVDSNLVCKVSDFGLSRVLEDDPDAAYTT 211
Query: 172 GTPD----YVAPEVLSYEPISLATDMWSVGVLAYVLLS 205
+ APE +++ S A+D+WS GV+ + +L+
Sbjct: 212 TGGKIPIRWTAPEAIAFRTFSSASDVWSFGVVMWEVLA 249
>pdb|3QD2|B Chain B, Crsytal Structure Of Mouse Perk Kinase Domain
Length = 332
Score = 57.8 bits (138), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 34/103 (33%), Positives = 54/103 (52%), Gaps = 13/103 (12%)
Query: 119 QILEALAFLHDHNITHLDLKPQNILLTKDNNIKLCDFGISRVVNDVVEVKEI-------- 170
QI EA+ FLH + H DLKP NI T D+ +K+ DFG+ ++ E + +
Sbjct: 172 QIAEAVEFLHSKGLMHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQDEEEQTVLTPMPAYA 231
Query: 171 -----IGTPDYVAPEVLSYEPISLATDMWSVGVLAYVLLSSHS 208
+GT Y++PE + S D++S+G++ + LL S S
Sbjct: 232 THXGQVGTKLYMSPEQIHGNNYSHKVDIFSLGLILFELLYSFS 274
>pdb|3FV8|A Chain A, Jnk3 Bound To Piperazine Amide Inhibitor, Sr2774
Length = 355
Score = 57.8 bits (138), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 38/130 (29%), Positives = 66/130 (50%), Gaps = 5/130 (3%)
Query: 84 HEMVLVLEMVPDGELQRLVDIQDGIPEQDTRSYM-KQILEALAFLHDHNITHLDLKPQNI 142
++ LV+E++ D L +++ ++ + + SY+ Q+L + LH I H DLKP NI
Sbjct: 102 QDVYLVMELM-DANLXQVIQME---LDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNI 157
Query: 143 LLTKDNNIKLCDFGISRVVNDVVEVKEIIGTPDYVAPEVLSYEPISLATDMWSVGVLAYV 202
++ D +K+ DFG++R + + T Y APEV+ D+WSVG +
Sbjct: 158 VVKSDXTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGE 217
Query: 203 LLSSHSPFAG 212
++ F G
Sbjct: 218 MVRHKILFPG 227
>pdb|2O8Y|A Chain A, Apo Irak4 Kinase Domain
pdb|2O8Y|B Chain B, Apo Irak4 Kinase Domain
Length = 298
Score = 57.8 bits (138), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 43/135 (31%), Positives = 64/135 (47%), Gaps = 7/135 (5%)
Query: 71 ERIVGLHEIYETPHEMVLVLEMVPDGELQRLVDIQDGIP--EQDTRSYMKQ-ILEALAFL 127
E +V L ++ LV P+G L + DG P R + Q + FL
Sbjct: 81 ENLVELLGFSSDGDDLCLVYVYXPNGSLLDRLSCLDGTPPLSWHXRCKIAQGAANGINFL 140
Query: 128 HDHNITHLDLKPQNILLTKDNNIKLCDFGISRVVN---DVVEVKEIIGTPDYVAPEVLSY 184
H+++ H D+K NILL + K+ DFG++R V I+GT Y APE L
Sbjct: 141 HENHHIHRDIKSANILLDEAFTAKISDFGLARASEKFAQXVXXSRIVGTTAYXAPEALRG 200
Query: 185 EPISLATDMWSVGVL 199
E I+ +D++S GV+
Sbjct: 201 E-ITPKSDIYSFGVV 214
>pdb|1UWJ|A Chain A, The Complex Of Mutant V599e B-raf And Bay439006
pdb|1UWJ|B Chain B, The Complex Of Mutant V599e B-raf And Bay439006
Length = 276
Score = 57.8 bits (138), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 29/109 (26%), Positives = 62/109 (56%), Gaps = 6/109 (5%)
Query: 118 KQILEALAFLHDHNITHLDLKPQNILLTKDNNIKLCDFGIS---RVVNDVVEVKEIIGTP 174
+Q + + +LH +I H DLK NI L +D +K+ DFG++ + + +++ G+
Sbjct: 111 RQTAQGMDYLHAKSIIHRDLKSNNIFLHEDLTVKIGDFGLATEKSRWSGSHQFEQLSGSI 170
Query: 175 DYVAPEVLSYE---PISLATDMWSVGVLAYVLLSSHSPFAGDNKQETFL 220
++APEV+ + P S +D+++ G++ Y L++ P++ N ++ +
Sbjct: 171 LWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQII 219
>pdb|3BLH|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1
pdb|3BLQ|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 IN COMPLEX WITH
ATP
pdb|3BLR|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 IN COMPLEX WITH
Flavopiridol
pdb|3MY1|A Chain A, Structure Of Cdk9CYCLINT1 IN COMPLEX WITH DRB
pdb|3LQ5|A Chain A, Structure Of Cdk9CYCLINT IN COMPLEX WITH S-Cr8
pdb|3TN8|A Chain A, Cdk9CYCLIN T IN COMPLEX WITH CAN508
pdb|3TNH|A Chain A, Cdk9CYCLIN T IN COMPLEX WITH CAN508
pdb|3TNI|A Chain A, Structure Of Cdk9CYCLIN T F241L
pdb|4BCH|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCI|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCJ|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 331
Score = 57.4 bits (137), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 57/237 (24%), Positives = 98/237 (41%), Gaps = 21/237 (8%)
Query: 20 SRGKFASVRKCTHKITKVEYAAKFIRKRRRSMDQMQDILHEAAVLYLAQKSERIVGLHEI 79
+G F V K H+ T + A K + L E +L L K E +V L EI
Sbjct: 27 GQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLL-KHENVVNLIEI 85
Query: 80 YET---PH-----EMVLVLEMVPDGELQRLVDIQDGIPEQDTRSYMKQILEALAFLHDHN 131
T P+ + LV + L ++ + + M+ +L L ++H +
Sbjct: 86 CRTKASPYNRCKGSIYLVFDFCEHDLAGLLSNVLVKFTLSEIKRVMQMLLNGLYYIHRNK 145
Query: 132 ITHLDLKPQNILLTKDNNIKLCDFGISRVVNDVVEVK-----EIIGTPDYVAPEVL---- 182
I H D+K N+L+T+D +KL DFG++R + + + T Y PE+L
Sbjct: 146 ILHRDMKAANVLITRDGVLKLADFGLARAFSLAKNSQPNRYXNRVVTLWYRPPELLLGER 205
Query: 183 SYEPISLATDMWSVGVLAYVLLSSHSPFAGDNKQETFLNISQCNFSFHEDLFGHISS 239
Y P D+W G + + + G+ +Q ISQ S +++ ++ +
Sbjct: 206 DYGP---PIDLWGAGCIMAEMWTRSPIMQGNTEQHQLALISQLCGSITPEVWPNVDN 259
>pdb|4BCF|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 331
Score = 57.4 bits (137), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 57/237 (24%), Positives = 98/237 (41%), Gaps = 21/237 (8%)
Query: 20 SRGKFASVRKCTHKITKVEYAAKFIRKRRRSMDQMQDILHEAAVLYLAQKSERIVGLHEI 79
+G F V K H+ T + A K + L E +L L K E +V L EI
Sbjct: 27 GQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLL-KHENVVNLIEI 85
Query: 80 YET---PH-----EMVLVLEMVPDGELQRLVDIQDGIPEQDTRSYMKQILEALAFLHDHN 131
T P+ + LV + L ++ + + M+ +L L ++H +
Sbjct: 86 CRTKASPYNRCKASIYLVFDFCEHDLAGLLSNVLVKFTLSEIKRVMQMLLNGLYYIHRNK 145
Query: 132 ITHLDLKPQNILLTKDNNIKLCDFGISRVVNDVVEVK-----EIIGTPDYVAPEVL---- 182
I H D+K N+L+T+D +KL DFG++R + + + T Y PE+L
Sbjct: 146 ILHRDMKAANVLITRDGVLKLADFGLARAFSLAKNSQPNRYXNRVVTLWYRPPELLLGER 205
Query: 183 SYEPISLATDMWSVGVLAYVLLSSHSPFAGDNKQETFLNISQCNFSFHEDLFGHISS 239
Y P D+W G + + + G+ +Q ISQ S +++ ++ +
Sbjct: 206 DYGP---PIDLWGAGCIMAEMWTRSPIMQGNTEQHQLALISQLCGSITPEVWPNVDN 259
>pdb|1UKH|A Chain A, Structural Basis For The Selective Inhibition Of Jnk1 By
The Scaffolding Protein Jip1 And Sp600125
pdb|1UKI|A Chain A, Structural Basis For The Selective Inhibition Of Jnk1 By
The Scaffolding Protein Jip1 And Sp600125
Length = 369
Score = 57.4 bits (137), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 42/152 (27%), Positives = 76/152 (50%), Gaps = 13/152 (8%)
Query: 71 ERIVGLHEIYETPH-------EMVLVLEMVPDGELQRLVDIQDGIPEQDTRSYM-KQILE 122
+ I+GL ++ TP ++ +V+E++ D L +++ ++ + + SY+ Q+L
Sbjct: 83 KNIIGLLNVF-TPQKSLEEFQDVYIVMELM-DANLCQVIQME---LDHERMSYLLYQMLC 137
Query: 123 ALAFLHDHNITHLDLKPQNILLTKDNNIKLCDFGISRVVNDVVEVKEIIGTPDYVAPEVL 182
+ LH I H DLKP NI++ D +K+ DFG++R + + T Y APEV+
Sbjct: 138 GIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVI 197
Query: 183 SYEPISLATDMWSVGVLAYVLLSSHSPFAGDN 214
D+WSVG + ++ F G +
Sbjct: 198 LGMGYKENVDIWSVGCIMGEMIKGGVLFPGTD 229
>pdb|3MI9|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Human P-Tefb
pdb|3MIA|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Atp-Bound
Human P-Tefb
Length = 351
Score = 57.4 bits (137), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 57/237 (24%), Positives = 98/237 (41%), Gaps = 21/237 (8%)
Query: 20 SRGKFASVRKCTHKITKVEYAAKFIRKRRRSMDQMQDILHEAAVLYLAQKSERIVGLHEI 79
+G F V K H+ T + A K + L E +L L K E +V L EI
Sbjct: 26 GQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLL-KHENVVNLIEI 84
Query: 80 YET---PH-----EMVLVLEMVPDGELQRLVDIQDGIPEQDTRSYMKQILEALAFLHDHN 131
T P+ + LV + L ++ + + M+ +L L ++H +
Sbjct: 85 CRTKASPYNRCKGSIYLVFDFCEHDLAGLLSNVLVKFTLSEIKRVMQMLLNGLYYIHRNK 144
Query: 132 ITHLDLKPQNILLTKDNNIKLCDFGISRVVNDVVEVK-----EIIGTPDYVAPEVL---- 182
I H D+K N+L+T+D +KL DFG++R + + + T Y PE+L
Sbjct: 145 ILHRDMKAANVLITRDGVLKLADFGLARAFSLAKNSQPNRYXNRVVTLWYRPPELLLGER 204
Query: 183 SYEPISLATDMWSVGVLAYVLLSSHSPFAGDNKQETFLNISQCNFSFHEDLFGHISS 239
Y P D+W G + + + G+ +Q ISQ S +++ ++ +
Sbjct: 205 DYGP---PIDLWGAGCIMAEMWTRSPIMQGNTEQHQLALISQLCGSITPEVWPNVDN 258
>pdb|2OIB|A Chain A, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|B Chain B, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|C Chain C, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|D Chain D, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIC|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OID|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
Length = 301
Score = 57.4 bits (137), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 43/135 (31%), Positives = 66/135 (48%), Gaps = 7/135 (5%)
Query: 71 ERIVGLHEIYETPHEMVLVLEMVPDGELQRLVDIQDGIP--EQDTRSYMKQ-ILEALAFL 127
E +V L ++ LV +P+G L + DG P R + Q + FL
Sbjct: 84 ENLVELLGFSSDGDDLCLVYVYMPNGSLLDRLSCLDGTPPLSWHMRCKIAQGAANGINFL 143
Query: 128 HDHNITHLDLKPQNILLTKDNNIKLCDFGISRVVN---DVVEVKEIIGTPDYVAPEVLSY 184
H+++ H D+K NILL + K+ DFG++R V I+GT Y+APE L
Sbjct: 144 HENHHIHRDIKSANILLDEAFTAKISDFGLARASEKFAQXVMXXRIVGTTAYMAPEALRG 203
Query: 185 EPISLATDMWSVGVL 199
E I+ +D++S GV+
Sbjct: 204 E-ITPKSDIYSFGVV 217
>pdb|2XRW|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin
Antagonistically Control The Nuclear Shuttling Of Nfat4
Length = 371
Score = 57.4 bits (137), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 42/152 (27%), Positives = 76/152 (50%), Gaps = 13/152 (8%)
Query: 71 ERIVGLHEIYETPH-------EMVLVLEMVPDGELQRLVDIQDGIPEQDTRSYM-KQILE 122
+ I+GL ++ TP ++ +V+E++ D L +++ ++ + + SY+ Q+L
Sbjct: 84 KNIIGLLNVF-TPQKSLEEFQDVYIVMELM-DANLCQVIQME---LDHERMSYLLYQMLC 138
Query: 123 ALAFLHDHNITHLDLKPQNILLTKDNNIKLCDFGISRVVNDVVEVKEIIGTPDYVAPEVL 182
+ LH I H DLKP NI++ D +K+ DFG++R + + T Y APEV+
Sbjct: 139 GIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVI 198
Query: 183 SYEPISLATDMWSVGVLAYVLLSSHSPFAGDN 214
D+WSVG + ++ F G +
Sbjct: 199 LGMGYKENVDIWSVGCIMGEMIKGGVLFPGTD 230
>pdb|2QOK|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:s768a Triple Mutant
Length = 373
Score = 57.4 bits (137), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 38/158 (24%), Positives = 73/158 (46%), Gaps = 6/158 (3%)
Query: 53 QMQDILHEAAVLYLAQKSERIVGLHEIYETPHEMVLVLEMVPDGELQRLVDIQDG-IPEQ 111
Q +D L EA+++ I+ L + +++V E + +G L + D
Sbjct: 89 QRRDFLGEASIMGQFDHPN-IIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVI 147
Query: 112 DTRSYMKQILEALAFLHDHNITHLDLKPQNILLTKDNNIKLCDFGISRVVNDVVEVKEII 171
++ I + +L D H DL +NIL+ + K+ DFG++RV+ D E
Sbjct: 148 QLVGMLRGIASGMKYLSDMGYVHRDLAARNILINSNLVCKVSDFGLARVLEDDPEAAYTT 207
Query: 172 GTPD----YVAPEVLSYEPISLATDMWSVGVLAYVLLS 205
+ +PE ++Y + A+D+WS G++ + ++S
Sbjct: 208 RGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMS 245
>pdb|2VWU|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWV|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWW|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWX|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWY|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWZ|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX0|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX1|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2X9F|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2XVD|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|4BB4|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
Length = 302
Score = 57.4 bits (137), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 42/180 (23%), Positives = 86/180 (47%), Gaps = 9/180 (5%)
Query: 53 QMQDILHEAAVLYLAQKSERIVGLHEIYETPHEMVLVLEMVPDGELQRLVDIQDG-IPEQ 111
Q ++ L EA+++ + I+ L + ++++ E + +G L + + DG
Sbjct: 60 QRREFLSEASIMGQFEHPN-IIRLEGVVTNSMPVMILTEFMENGALDSFLRLNDGQFTVI 118
Query: 112 DTRSYMKQILEALAFLHDHNITHLDLKPQNILLTKDNNIKLCDFGISRVV----NDVVEV 167
++ I + +L + + H DL +NIL+ + K+ DFG+SR + +D E
Sbjct: 119 QLVGMLRGIASGMRYLAEMSYVHRDLAARNILVNSNLVCKVSDFGLSRFLEENSSDPTET 178
Query: 168 KEIIGT-P-DYVAPEVLSYEPISLATDMWSVGVLAYVLLS-SHSPFAGDNKQETFLNISQ 224
+ G P + APE +++ + A+D WS G++ + ++S P+ + Q+ I Q
Sbjct: 179 SSLGGKIPIRWTAPEAIAFRKFTSASDAWSYGIVMWEVMSFGERPYWDMSNQDVINAIEQ 238
>pdb|4EC8|A Chain A, Structure Of Full Length Cdk9 In Complex With Cyclint And
Drb
pdb|4EC9|A Chain A, Crystal Structure Of Full-Length Cdk9 In Complex With
Cyclin T
Length = 373
Score = 57.4 bits (137), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 57/237 (24%), Positives = 98/237 (41%), Gaps = 21/237 (8%)
Query: 20 SRGKFASVRKCTHKITKVEYAAKFIRKRRRSMDQMQDILHEAAVLYLAQKSERIVGLHEI 79
+G F V K H+ T + A K + L E +L L K E +V L EI
Sbjct: 27 GQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLL-KHENVVNLIEI 85
Query: 80 YET---PHE-----MVLVLEMVPDGELQRLVDIQDGIPEQDTRSYMKQILEALAFLHDHN 131
T P+ + LV + L ++ + + M+ +L L ++H +
Sbjct: 86 CRTKASPYNRCKGSIYLVFDFCEHDLAGLLSNVLVKFTLSEIKRVMQMLLNGLYYIHRNK 145
Query: 132 ITHLDLKPQNILLTKDNNIKLCDFGISRVVNDVVEVK-----EIIGTPDYVAPEVL---- 182
I H D+K N+L+T+D +KL DFG++R + + + T Y PE+L
Sbjct: 146 ILHRDMKAANVLITRDGVLKLADFGLARAFSLAKNSQPNRYXNRVVTLWYRPPELLLGER 205
Query: 183 SYEPISLATDMWSVGVLAYVLLSSHSPFAGDNKQETFLNISQCNFSFHEDLFGHISS 239
Y P D+W G + + + G+ +Q ISQ S +++ ++ +
Sbjct: 206 DYGP---PIDLWGAGCIMAEMWTRSPIMQGNTEQHQLALISQLCGSITPEVWPNVDN 259
>pdb|3VUD|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map
Kinase Jnk1
Length = 370
Score = 57.0 bits (136), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 42/152 (27%), Positives = 76/152 (50%), Gaps = 13/152 (8%)
Query: 71 ERIVGLHEIYETPH-------EMVLVLEMVPDGELQRLVDIQDGIPEQDTRSYM-KQILE 122
+ I+GL ++ TP ++ +V+E++ D L +++ ++ + + SY+ Q+L
Sbjct: 83 KNIIGLLNVF-TPQKSLEEFQDVYIVMELM-DANLCQVIQME---LDHERMSYLLYQMLC 137
Query: 123 ALAFLHDHNITHLDLKPQNILLTKDNNIKLCDFGISRVVNDVVEVKEIIGTPDYVAPEVL 182
+ LH I H DLKP NI++ D +K+ DFG++R + + T Y APEV+
Sbjct: 138 GIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVI 197
Query: 183 SYEPISLATDMWSVGVLAYVLLSSHSPFAGDN 214
D+WSVG + ++ F G +
Sbjct: 198 LGMGYKENVDIWSVGCIMGEMIKGGVLFPGTD 229
>pdb|3E7O|A Chain A, Crystal Structure Of Jnk2
pdb|3E7O|B Chain B, Crystal Structure Of Jnk2
Length = 360
Score = 57.0 bits (136), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 32/98 (32%), Positives = 49/98 (50%)
Query: 117 MKQILEALAFLHDHNITHLDLKPQNILLTKDNNIKLCDFGISRVVNDVVEVKEIIGTPDY 176
+ Q+L + LH I H DLKP NI++ D +K+ DFG++R + + + T Y
Sbjct: 130 LYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTASTNFMMTPYVVTRYY 189
Query: 177 VAPEVLSYEPISLATDMWSVGVLAYVLLSSHSPFAGDN 214
APEV+ D+WSVG + L+ F G +
Sbjct: 190 RAPEVILGMGYKENVDIWSVGCIMGELVKGSVIFQGTD 227
>pdb|2QOL|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596:y602:s768g Triple Mutant
Length = 373
Score = 57.0 bits (136), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 38/158 (24%), Positives = 72/158 (45%), Gaps = 6/158 (3%)
Query: 53 QMQDILHEAAVLYLAQKSERIVGLHEIYETPHEMVLVLEMVPDGELQRLVDIQDG-IPEQ 111
Q +D L EA+++ I+ L + +++V E + +G L + D
Sbjct: 89 QRRDFLGEASIMGQFDHPN-IIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVI 147
Query: 112 DTRSYMKQILEALAFLHDHNITHLDLKPQNILLTKDNNIKLCDFGISRVVNDVVEVKEII 171
++ I + +L D H DL +NIL+ + K+ DFG+ RV+ D E
Sbjct: 148 QLVGMLRGIASGMKYLSDMGYVHRDLAARNILINSNLVCKVSDFGLGRVLEDDPEAAYTT 207
Query: 172 GTPD----YVAPEVLSYEPISLATDMWSVGVLAYVLLS 205
+ +PE ++Y + A+D+WS G++ + ++S
Sbjct: 208 RGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMS 245
>pdb|2XS0|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin
Antagonistically Control The Nuclear Shuttling Of Nfat4
Length = 386
Score = 57.0 bits (136), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 42/152 (27%), Positives = 76/152 (50%), Gaps = 13/152 (8%)
Query: 71 ERIVGLHEIYETPH-------EMVLVLEMVPDGELQRLVDIQDGIPEQDTRSYM-KQILE 122
+ I+GL ++ TP ++ +V+E++ D L +++ ++ + + SY+ Q+L
Sbjct: 85 KNIIGLLNVF-TPQKSLEEFQDVYIVMELM-DANLCQVIQME---LDHERMSYLLYQMLC 139
Query: 123 ALAFLHDHNITHLDLKPQNILLTKDNNIKLCDFGISRVVNDVVEVKEIIGTPDYVAPEVL 182
+ LH I H DLKP NI++ D +K+ DFG++R + + T Y APEV+
Sbjct: 140 GIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMVPFVVTRYYRAPEVI 199
Query: 183 SYEPISLATDMWSVGVLAYVLLSSHSPFAGDN 214
D+WSVG + ++ F G +
Sbjct: 200 LGMGYKENVDIWSVGCIMGEMIKGGVLFPGTD 231
>pdb|3FI2|A Chain A, Crystal Structure Of Jnk3 With Amino-Pyrazole Inhibitor,
Sr- 3451
Length = 353
Score = 57.0 bits (136), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 38/130 (29%), Positives = 66/130 (50%), Gaps = 5/130 (3%)
Query: 84 HEMVLVLEMVPDGELQRLVDIQDGIPEQDTRSYM-KQILEALAFLHDHNITHLDLKPQNI 142
++ LV+E++ D L +++ ++ + + SY+ Q+L + LH I H DLKP NI
Sbjct: 102 QDVYLVMELM-DANLCQVIQME---LDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNI 157
Query: 143 LLTKDNNIKLCDFGISRVVNDVVEVKEIIGTPDYVAPEVLSYEPISLATDMWSVGVLAYV 202
++ D +K+ DFG++R + + T Y APEV+ D+WSVG +
Sbjct: 158 VVKSDXTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGE 217
Query: 203 LLSSHSPFAG 212
++ F G
Sbjct: 218 MVRHKILFPG 227
>pdb|2H34|A Chain A, Apoenzyme Crystal Structure Of The Tuberculosis
SerineTHREONINE Kinase, Pkne
pdb|2H34|B Chain B, Apoenzyme Crystal Structure Of The Tuberculosis
SerineTHREONINE Kinase, Pkne
Length = 309
Score = 57.0 bits (136), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 40/155 (25%), Positives = 74/155 (47%), Gaps = 2/155 (1%)
Query: 73 IVGLHEIYETPHEMVLVLEMVPDGELQRLVDIQDGIPEQDTRSYMKQILEALAFLHDHNI 132
+V +H+ E ++ + ++ +L + Q + + ++QI AL H
Sbjct: 96 VVPIHDFGEIDGQLYVDXRLINGVDLAAXLRRQGPLAPPRAVAIVRQIGSALDAAHAAGA 155
Query: 133 THLDLKPQNILLTKDNNIKLCDFGISRVVND--VVEVKEIIGTPDYVAPEVLSYEPISLA 190
TH D+KP+NIL++ D+ L DFGI+ D + ++ +GT Y APE S +
Sbjct: 156 THRDVKPENILVSADDFAYLVDFGIASATTDEKLTQLGNTVGTLYYXAPERFSESHATYR 215
Query: 191 TDMWSVGVLAYVLLSSHSPFAGDNKQETFLNISQC 225
D++++ + Y L+ P+ GD +I+Q
Sbjct: 216 ADIYALTCVLYECLTGSPPYQGDQLSVXGAHINQA 250
>pdb|2DQ7|X Chain X, Crystal Structure Of Fyn Kinase Domain Complexed With
Staurosporine
Length = 283
Score = 56.6 bits (135), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 34/125 (27%), Positives = 59/125 (47%), Gaps = 12/125 (9%)
Query: 119 QILEALAFLHDHNITHLDLKPQNILLTKDNNIKLCDFGISRVVND-VVEVKEIIGTP-DY 176
Q+ +A++ N H DL+ NIL+ K+ DFG++R++ D ++ P +
Sbjct: 113 QVAAGMAYIERMNYIHRDLRSANILVGNGLICKIADFGLARLIEDNEXTARQGAKFPIKW 172
Query: 177 VAPEVLSYEPISLATDMWSVGVLAYVLLS-SHSPFAGDNKQETFLNISQ---------CN 226
APE Y ++ +D+WS G+L L++ P+ G N +E + + C
Sbjct: 173 TAPEAALYGRFTIKSDVWSFGILLTELVTKGRVPYPGMNNREVLEQVERGYRMPCPQDCP 232
Query: 227 FSFHE 231
S HE
Sbjct: 233 ISLHE 237
>pdb|3ELJ|A Chain A, Jnk1 Complexed With A Bis-Anilino-Pyrrolopyrimidine
Inhibitor
Length = 369
Score = 56.6 bits (135), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 42/150 (28%), Positives = 75/150 (50%), Gaps = 13/150 (8%)
Query: 71 ERIVGLHEIYETPH-------EMVLVLEMVPDGELQRLVDIQDGIPEQDTRSYM-KQILE 122
+ I+GL ++ TP ++ +V+E++ D L +++ ++ + + SY+ Q+L
Sbjct: 88 KNIIGLLNVF-TPQKSLEEFQDVYIVMELM-DANLCQVIQME---LDHERMSYLLYQMLC 142
Query: 123 ALAFLHDHNITHLDLKPQNILLTKDNNIKLCDFGISRVVNDVVEVKEIIGTPDYVAPEVL 182
+ LH I H DLKP NI++ D +K+ DFG++R + + T Y APEV+
Sbjct: 143 GIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVI 202
Query: 183 SYEPISLATDMWSVGVLAYVLLSSHSPFAG 212
D+WSVG + ++ F G
Sbjct: 203 LGMGYKENVDLWSVGCIMGEMVCHKILFPG 232
>pdb|3PZE|A Chain A, Jnk1 In Complex With Inhibitor
Length = 358
Score = 56.6 bits (135), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 42/150 (28%), Positives = 75/150 (50%), Gaps = 13/150 (8%)
Query: 71 ERIVGLHEIYETPH-------EMVLVLEMVPDGELQRLVDIQDGIPEQDTRSYM-KQILE 122
+ I+GL ++ TP ++ +V+E++ D L +++ ++ + + SY+ Q+L
Sbjct: 77 KNIIGLLNVF-TPQKSLEEFQDVYIVMELM-DANLCQVIQME---LDHERMSYLLYQMLC 131
Query: 123 ALAFLHDHNITHLDLKPQNILLTKDNNIKLCDFGISRVVNDVVEVKEIIGTPDYVAPEVL 182
+ LH I H DLKP NI++ D +K+ DFG++R + + T Y APEV+
Sbjct: 132 GIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVI 191
Query: 183 SYEPISLATDMWSVGVLAYVLLSSHSPFAG 212
D+WSVG + ++ F G
Sbjct: 192 LGMGYKENVDLWSVGCIMGEMVCHKILFPG 221
>pdb|3TTJ|A Chain A, Crystal Structure Of Jnk3 Complexed With Cc-359, A Jnk
Inhibitor For The Prevention Of Ischemia-Reperfusion
Injury
pdb|3TTI|A Chain A, Crystal Structure Of Jnk3 Complexed With Cc-930, An Orally
Active Anti-Fibrotic Jnk Inhibitor
Length = 464
Score = 56.6 bits (135), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 36/117 (30%), Positives = 62/117 (52%), Gaps = 5/117 (4%)
Query: 84 HEMVLVLEMVPDGELQRLVDIQDGIPEQDTRSYM-KQILEALAFLHDHNITHLDLKPQNI 142
++ LV+E++ D L +++ ++ + + SY+ Q+L + LH I H DLKP NI
Sbjct: 140 QDVYLVMELM-DANLCQVIQME---LDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNI 195
Query: 143 LLTKDNNIKLCDFGISRVVNDVVEVKEIIGTPDYVAPEVLSYEPISLATDMWSVGVL 199
++ D +K+ DFG++R + + T Y APEV+ D+WSVG +
Sbjct: 196 VVKSDCTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCI 252
>pdb|1JNK|A Chain A, The C-Jun N-Terminal Kinase (Jnk3s) Complexed With
Mgamp-Pnp
Length = 423
Score = 56.6 bits (135), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 38/130 (29%), Positives = 66/130 (50%), Gaps = 5/130 (3%)
Query: 84 HEMVLVLEMVPDGELQRLVDIQDGIPEQDTRSYM-KQILEALAFLHDHNITHLDLKPQNI 142
++ LV+E++ D L +++ ++ + + SY+ Q+L + LH I H DLKP NI
Sbjct: 140 QDVYLVMELM-DANLCQVIQME---LDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNI 195
Query: 143 LLTKDNNIKLCDFGISRVVNDVVEVKEIIGTPDYVAPEVLSYEPISLATDMWSVGVLAYV 202
++ D +K+ DFG++R + + T Y APEV+ D+WSVG +
Sbjct: 196 VVKSDCTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGE 255
Query: 203 LLSSHSPFAG 212
++ F G
Sbjct: 256 MVRHKILFPG 265
>pdb|3NPC|A Chain A, Crystal Structure Of Jnk2 Complexed With Birb796
pdb|3NPC|B Chain B, Crystal Structure Of Jnk2 Complexed With Birb796
Length = 364
Score = 56.6 bits (135), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 39/132 (29%), Positives = 68/132 (51%), Gaps = 5/132 (3%)
Query: 84 HEMVLVLEMVPDGELQRLVDIQDGIPEQDTRSYM-KQILEALAFLHDHNITHLDLKPQNI 142
++ LV+E++ D L +++ ++ + + SY+ Q+L + LH I H DLKP NI
Sbjct: 102 QDVYLVMELM-DANLCQVIHME---LDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNI 157
Query: 143 LLTKDNNIKLCDFGISRVVNDVVEVKEIIGTPDYVAPEVLSYEPISLATDMWSVGVLAYV 202
++ D +K+ DFG++R + + T Y APEV+ + D+WSVG +
Sbjct: 158 VVKSDCTLKILDFGLARTACTNFMMTPYVVTRYYRAPEVILGMGYAANVDIWSVGCIMGE 217
Query: 203 LLSSHSPFAGDN 214
L+ F G +
Sbjct: 218 LVKGCVIFQGTD 229
>pdb|3V3V|A Chain A, Structural And Functional Analysis Of Quercetagetin, A
Natural Jnk1 Inhibitor
Length = 379
Score = 56.2 bits (134), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 42/152 (27%), Positives = 76/152 (50%), Gaps = 13/152 (8%)
Query: 71 ERIVGLHEIYETPH-------EMVLVLEMVPDGELQRLVDIQDGIPEQDTRSYM-KQILE 122
+ I+GL ++ TP ++ +V+E++ D L +++ ++ + + SY+ Q+L
Sbjct: 83 KNIIGLLNVF-TPQKSLEEFQDVYIVMELM-DANLCQVIQME---LDHERMSYLLYQMLC 137
Query: 123 ALAFLHDHNITHLDLKPQNILLTKDNNIKLCDFGISRVVNDVVEVKEIIGTPDYVAPEVL 182
+ LH I H DLKP NI++ D +K+ DFG++R + + T Y APEV+
Sbjct: 138 GIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPEVVTRYYRAPEVI 197
Query: 183 SYEPISLATDMWSVGVLAYVLLSSHSPFAGDN 214
D+WSVG + ++ F G +
Sbjct: 198 LGMGYKENVDIWSVGCIMGEMIKGGVLFPGTD 229
>pdb|2G01|A Chain A, Pyrazoloquinolones As Novel, Selective Jnk1 Inhibitors
pdb|2G01|B Chain B, Pyrazoloquinolones As Novel, Selective Jnk1 Inhibitors
pdb|2GMX|A Chain A, Selective Aminopyridine-Based C-Jun N-Terminal Kinase
Inhibitors With Cellular Activity
pdb|2GMX|B Chain B, Selective Aminopyridine-Based C-Jun N-Terminal Kinase
Inhibitors With Cellular Activity
pdb|2H96|A Chain A, Discovery Of Potent, Highly Selective, And Orally
Bioavailable Pyridine Carboxamide C-Jun Nh2-Terminal
Kinase Inhibitors
pdb|2H96|B Chain B, Discovery Of Potent, Highly Selective, And Orally
Bioavailable Pyridine Carboxamide C-Jun Nh2-Terminal
Kinase Inhibitors
pdb|2NO3|A Chain A, Novel 4-Anilinopyrimidines As Potent Jnk1 Inhibitors
pdb|2NO3|B Chain B, Novel 4-Anilinopyrimidines As Potent Jnk1 Inhibitors
Length = 370
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 42/150 (28%), Positives = 76/150 (50%), Gaps = 13/150 (8%)
Query: 71 ERIVGLHEIYETPH-------EMVLVLEMVPDGELQRLVDIQDGIPEQDTRSYM-KQILE 122
+ I+GL ++ TP ++ +V+E++ D L +++ ++ + + SY+ Q+L
Sbjct: 83 KNIIGLLNVF-TPQKSLEEFQDVYIVMELM-DANLCQVIQME---LDHERMSYLLYQMLC 137
Query: 123 ALAFLHDHNITHLDLKPQNILLTKDNNIKLCDFGISRVVNDVVEVKEIIGTPDYVAPEVL 182
+ LH I H DLKP NI++ D +K+ DFG++R ++ + T Y APEV+
Sbjct: 138 GIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMEPEVVTRYYRAPEVI 197
Query: 183 SYEPISLATDMWSVGVLAYVLLSSHSPFAG 212
D+WSVG + ++ F G
Sbjct: 198 LGMGYKENVDLWSVGCIMGEMVCHKILFPG 227
>pdb|3PTG|A Chain A, Design And Synthesis Of A Novel, Orally Efficacious
Tri-Substituted Thiophene Based Jnk Inhibitor
Length = 363
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 38/130 (29%), Positives = 66/130 (50%), Gaps = 5/130 (3%)
Query: 84 HEMVLVLEMVPDGELQRLVDIQDGIPEQDTRSYM-KQILEALAFLHDHNITHLDLKPQNI 142
++ LV+E++ D L +++ ++ + + SY+ Q+L + LH I H DLKP NI
Sbjct: 102 QDVYLVMELM-DANLCQVIQME---LDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNI 157
Query: 143 LLTKDNNIKLCDFGISRVVNDVVEVKEIIGTPDYVAPEVLSYEPISLATDMWSVGVLAYV 202
++ D +K+ DFG++R + + T Y APEV+ D+WSVG +
Sbjct: 158 VVKSDCTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGE 217
Query: 203 LLSSHSPFAG 212
++ F G
Sbjct: 218 MVRHKILFPG 227
>pdb|3OXI|A Chain A, Design And Synthesis Of Disubstituted Thiophene And
Thiazole Based Inhibitors Of Jnk For The Treatment Of
Neurodegenerative Diseases
pdb|3OY1|A Chain A, Highly Selective C-Jun N-Terminal Kinase (Jnk) 2 And 3
Inhibitors With In Vitro Cns-Like Pharmacokinetic
Properties
Length = 362
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 38/130 (29%), Positives = 66/130 (50%), Gaps = 5/130 (3%)
Query: 84 HEMVLVLEMVPDGELQRLVDIQDGIPEQDTRSYM-KQILEALAFLHDHNITHLDLKPQNI 142
++ LV+E++ D L +++ ++ + + SY+ Q+L + LH I H DLKP NI
Sbjct: 101 QDVYLVMELM-DANLCQVIQME---LDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNI 156
Query: 143 LLTKDNNIKLCDFGISRVVNDVVEVKEIIGTPDYVAPEVLSYEPISLATDMWSVGVLAYV 202
++ D +K+ DFG++R + + T Y APEV+ D+WSVG +
Sbjct: 157 VVKSDCTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGE 216
Query: 203 LLSSHSPFAG 212
++ F G
Sbjct: 217 MVRHKILFPG 226
>pdb|2OK1|A Chain A, Crystal Structure Of Jnk3 Bound To N-Benzyl-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|2P33|A Chain A, Synthesis And Sar Of Aminopyrimidines As Novel C-Jun N-
Terminal Kinase (Jnk) Inhibitors
pdb|3CGF|A Chain A, Irak-4 Inhibitors (Part Ii)- A Structure Based Assessment
Of Imidazo[1,2 A]pyridine Binding
pdb|3CGO|A Chain A, Irak-4 Inhibitors (Part Ii)- A Structure Based Assessment
Of Imidazo[1,2 A]pyridine Binding
pdb|3G90|X Chain X, Jnk-3 Bound To
(Z)-5-Fluoro-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)
Methyl)-3-(Hydroxyimino)indolin-2-One
pdb|3G9N|A Chain A, Jnk3 Bound To
(Z)-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)methyl)-3-
(Hydroxyimino)-4-Phenylindolin-2-One
pdb|3G9L|X Chain X, Jnk3 Bound To
(Z)-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)methyl)-3-
(Hydroxyimino)-4-Styrylindolin-2-One
Length = 365
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 38/130 (29%), Positives = 66/130 (50%), Gaps = 5/130 (3%)
Query: 84 HEMVLVLEMVPDGELQRLVDIQDGIPEQDTRSYM-KQILEALAFLHDHNITHLDLKPQNI 142
++ LV+E++ D L +++ ++ + + SY+ Q+L + LH I H DLKP NI
Sbjct: 103 QDVYLVMELM-DANLCQVIQME---LDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNI 158
Query: 143 LLTKDNNIKLCDFGISRVVNDVVEVKEIIGTPDYVAPEVLSYEPISLATDMWSVGVLAYV 202
++ D +K+ DFG++R + + T Y APEV+ D+WSVG +
Sbjct: 159 VVKSDCTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGE 218
Query: 203 LLSSHSPFAG 212
++ F G
Sbjct: 219 MVRHKILFPG 228
>pdb|4H36|A Chain A, Crystal Structure Of Jnk3 In Complex With Atf2 Peptide
pdb|4H39|A Chain A, Crystal Structure Of Jnk3 In Complex With Jip1 Peptide
pdb|4H3B|A Chain A, Crystal Structure Of Jnk3 In Complex With Sab Peptide
pdb|4H3B|C Chain C, Crystal Structure Of Jnk3 In Complex With Sab Peptide
Length = 356
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 38/130 (29%), Positives = 66/130 (50%), Gaps = 5/130 (3%)
Query: 84 HEMVLVLEMVPDGELQRLVDIQDGIPEQDTRSYM-KQILEALAFLHDHNITHLDLKPQNI 142
++ LV+E++ D L +++ ++ + + SY+ Q+L + LH I H DLKP NI
Sbjct: 96 QDVYLVMELM-DANLCQVIQME---LDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNI 151
Query: 143 LLTKDNNIKLCDFGISRVVNDVVEVKEIIGTPDYVAPEVLSYEPISLATDMWSVGVLAYV 202
++ D +K+ DFG++R + + T Y APEV+ D+WSVG +
Sbjct: 152 VVKSDCTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGE 211
Query: 203 LLSSHSPFAG 212
++ F G
Sbjct: 212 MVRHKILFPG 221
>pdb|1PMN|A Chain A, Crystal Structure Of Jnk3 In Complex With An Imidazole-
Pyrimidine Inhibitor
pdb|1PMQ|A Chain A, The Structure Of Jnk3 In Complex With An Imidazole-
Pyrimidine Inhibitor
pdb|1PMU|A Chain A, The Crystal Structure Of Jnk3 In Complex With A
Phenantroline Inhibitor
pdb|1PMV|A Chain A, The Structure Of Jnk3 In Complex With A
Dihydroanthrapyrazole Inhibitor
Length = 364
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 38/130 (29%), Positives = 66/130 (50%), Gaps = 5/130 (3%)
Query: 84 HEMVLVLEMVPDGELQRLVDIQDGIPEQDTRSYM-KQILEALAFLHDHNITHLDLKPQNI 142
++ LV+E++ D L +++ ++ + + SY+ Q+L + LH I H DLKP NI
Sbjct: 103 QDVYLVMELM-DANLCQVIQME---LDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNI 158
Query: 143 LLTKDNNIKLCDFGISRVVNDVVEVKEIIGTPDYVAPEVLSYEPISLATDMWSVGVLAYV 202
++ D +K+ DFG++R + + T Y APEV+ D+WSVG +
Sbjct: 159 VVKSDCTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGE 218
Query: 203 LLSSHSPFAG 212
++ F G
Sbjct: 219 MVRHKILFPG 228
>pdb|2B1P|A Chain A, Inhibitor Complex Of Jnk3
Length = 355
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 38/130 (29%), Positives = 66/130 (50%), Gaps = 5/130 (3%)
Query: 84 HEMVLVLEMVPDGELQRLVDIQDGIPEQDTRSYM-KQILEALAFLHDHNITHLDLKPQNI 142
++ LV+E++ D L +++ ++ + + SY+ Q+L + LH I H DLKP NI
Sbjct: 95 QDVYLVMELM-DANLCQVIQME---LDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNI 150
Query: 143 LLTKDNNIKLCDFGISRVVNDVVEVKEIIGTPDYVAPEVLSYEPISLATDMWSVGVLAYV 202
++ D +K+ DFG++R + + T Y APEV+ D+WSVG +
Sbjct: 151 VVKSDCTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGE 210
Query: 203 LLSSHSPFAG 212
++ F G
Sbjct: 211 MVRHKILFPG 220
>pdb|2O0U|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-{3-Cyano-6-[3-(1-
Piperidinyl)propanoyl]-4,5,6,7-Tetrahydrothieno[2,
3-C]pyridin-2-Yl}- 1-Naphthalenecarboxamide
pdb|2O2U|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-(3-Cyano-4,5,6,7-
Tetrahydro-1-Benzothien-2-Yl)-2-Fluorobenzamide
pdb|2ZDT|A Chain A, Crystal Structure Of Human Jnk3 Complexed With An
Isoquinolone Inhibitor
pdb|2ZDU|A Chain A, Crystal Structure Of Human Jnk3 Complexed With An
Isoquinolone Inhibitor
pdb|3DA6|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-(3-Methyl-
4-(3-(2-(Methylamino)pyrimidin-4-Yl)pyridin-2-Yloxy)
Naphthalen-1-Yl)-1h-Benzo[d]imidazol-2-Amine
pdb|2WAJ|A Chain A, Crystal Structure Of Human Jnk3 Complexed With A
1-Aryl-3,4- Dihydroisoquinoline Inhibitor
pdb|3V6R|A Chain A, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6R|B Chain B, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6S|A Chain A, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6S|B Chain B, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
Length = 364
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 38/130 (29%), Positives = 66/130 (50%), Gaps = 5/130 (3%)
Query: 84 HEMVLVLEMVPDGELQRLVDIQDGIPEQDTRSYM-KQILEALAFLHDHNITHLDLKPQNI 142
++ LV+E++ D L +++ ++ + + SY+ Q+L + LH I H DLKP NI
Sbjct: 102 QDVYLVMELM-DANLCQVIQME---LDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNI 157
Query: 143 LLTKDNNIKLCDFGISRVVNDVVEVKEIIGTPDYVAPEVLSYEPISLATDMWSVGVLAYV 202
++ D +K+ DFG++R + + T Y APEV+ D+WSVG +
Sbjct: 158 VVKSDCTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGE 217
Query: 203 LLSSHSPFAG 212
++ F G
Sbjct: 218 MVRHKILFPG 227
>pdb|2EXC|X Chain X, Inhibitor Complex Of Jnk3
Length = 356
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 38/130 (29%), Positives = 66/130 (50%), Gaps = 5/130 (3%)
Query: 84 HEMVLVLEMVPDGELQRLVDIQDGIPEQDTRSYM-KQILEALAFLHDHNITHLDLKPQNI 142
++ LV+E++ D L +++ ++ + + SY+ Q+L + LH I H DLKP NI
Sbjct: 96 QDVYLVMELM-DANLCQVIQME---LDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNI 151
Query: 143 LLTKDNNIKLCDFGISRVVNDVVEVKEIIGTPDYVAPEVLSYEPISLATDMWSVGVLAYV 202
++ D +K+ DFG++R + + T Y APEV+ D+WSVG +
Sbjct: 152 VVKSDCTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGE 211
Query: 203 LLSSHSPFAG 212
++ F G
Sbjct: 212 MVRHKILFPG 221
>pdb|3O17|A Chain A, Crystal Structure Of Jnk1-Alpha1 Isoform
pdb|3O17|B Chain B, Crystal Structure Of Jnk1-Alpha1 Isoform
pdb|3O2M|A Chain A, Crystal Structure Of Jnk1-Alpha1 Isoform Complex With A
Biaryl Tetrazol (A-82118)
pdb|3O2M|B Chain B, Crystal Structure Of Jnk1-Alpha1 Isoform Complex With A
Biaryl Tetrazol (A-82118)
Length = 370
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 42/150 (28%), Positives = 76/150 (50%), Gaps = 13/150 (8%)
Query: 71 ERIVGLHEIYETPH-------EMVLVLEMVPDGELQRLVDIQDGIPEQDTRSYM-KQILE 122
+ I+GL ++ TP ++ +V+E++ D L +++ ++ + + SY+ Q+L
Sbjct: 83 KNIIGLLNVF-TPQKSLEEFQDVYIVMELM-DANLCQVIQME---LDHERMSYLLYQMLC 137
Query: 123 ALAFLHDHNITHLDLKPQNILLTKDNNIKLCDFGISRVVNDVVEVKEIIGTPDYVAPEVL 182
+ LH I H DLKP NI++ D +K+ DFG++R ++ + T Y APEV+
Sbjct: 138 GIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMEPEVVTRYYRAPEVI 197
Query: 183 SYEPISLATDMWSVGVLAYVLLSSHSPFAG 212
D+WSVG + ++ F G
Sbjct: 198 LGMGYKENVDIWSVGCIMGEMVCHKILFPG 227
>pdb|1FVR|A Chain A, Tie2 Kinase Domain
pdb|1FVR|B Chain B, Tie2 Kinase Domain
Length = 327
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 60/252 (23%), Positives = 100/252 (39%), Gaps = 25/252 (9%)
Query: 22 GKFASVRKCTHKITKVEYAAKFIR-KRRRSMDQMQDILHEAAVLYLAQKSERIVGLHEIY 80
G F V K K + A R K S D +D E VL I+ L
Sbjct: 36 GNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINLLGAC 95
Query: 81 ETPHEMVLVLEMVPDGEL------QRLVDIQDG----------IPEQDTRSYMKQILEAL 124
E + L +E P G L R+++ + Q + + +
Sbjct: 96 EHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGM 155
Query: 125 AFLHDHNITHLDLKPQNILLTKDNNIKLCDFGISRVVNDVVEVKEIIGT--PDYVAPEVL 182
+L H DL +NIL+ ++ K+ DFG+SR V VK+ +G ++A E L
Sbjct: 156 DYLSQKQFIHRDLAARNILVGENYVAKIADFGLSR--GQEVYVKKTMGRLPVRWMAIESL 213
Query: 183 SYEPISLATDMWSVGVLAYVLLS-SHSPFAGDNKQETFLNISQCNFSFHEDLFGHISSQA 241
+Y + +D+WS GVL + ++S +P+ G E + + Q + + L + +
Sbjct: 214 NYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGMTCAELYEKLPQ-GYRLEKPL--NCDDEV 270
Query: 242 KDFIQSCLVTDP 253
D ++ C P
Sbjct: 271 YDLMRQCWREKP 282
>pdb|3RGF|A Chain A, Crystal Structure Of Human Cdk8CYCC
Length = 405
Score = 55.8 bits (133), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 34/112 (30%), Positives = 60/112 (53%), Gaps = 9/112 (8%)
Query: 108 IPEQDTRSYMKQILEALAFLHDHNITHLDLKPQNILLTKD----NNIKLCDFGISRVVND 163
+P +S + QIL+ + +LH + + H DLKP NIL+ + +K+ D G +R+ N
Sbjct: 125 LPRGMVKSLLYQILDGIHYLHANWVLHRDLKPANILVMGEGPERGRVKIADMGFARLFNS 184
Query: 164 ----VVEVKEIIGTPDYVAPE-VLSYEPISLATDMWSVGVLAYVLLSSHSPF 210
+ ++ ++ T Y APE +L + A D+W++G + LL+S F
Sbjct: 185 PLKPLADLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIF 236
>pdb|2OO8|X Chain X, Synthesis, Structural Analysis, And Sar Studies Of
Triazine Derivatives As Potent, Selective Tie-2
Inhibitors
pdb|2OSC|A Chain A, Synthesis, Structural Analysis, And Sar Studies Of
Triazine Derivatives As Potent, Selective Tie-2
Inhibitors
pdb|2P4I|A Chain A, Evolution Of A Highly Selective And Potent
2-(Pyridin-2-Yl)- 1,3,5-Triazine Tie-2 Kinase Inhibitor
pdb|2P4I|B Chain B, Evolution Of A Highly Selective And Potent
2-(Pyridin-2-Yl)- 1,3,5-Triazine Tie-2 Kinase Inhibitor
pdb|3L8P|A Chain A, Crystal Structure Of Cytoplasmic Kinase Domain Of Tie2
Complexed With Inhibitor Cep11207
Length = 317
Score = 55.8 bits (133), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 60/252 (23%), Positives = 100/252 (39%), Gaps = 25/252 (9%)
Query: 22 GKFASVRKCTHKITKVEYAAKFIR-KRRRSMDQMQDILHEAAVLYLAQKSERIVGLHEIY 80
G F V K K + A R K S D +D E VL I+ L
Sbjct: 26 GNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINLLGAC 85
Query: 81 ETPHEMVLVLEMVPDGEL------QRLVDIQDG----------IPEQDTRSYMKQILEAL 124
E + L +E P G L R+++ + Q + + +
Sbjct: 86 EHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGM 145
Query: 125 AFLHDHNITHLDLKPQNILLTKDNNIKLCDFGISRVVNDVVEVKEIIGT--PDYVAPEVL 182
+L H DL +NIL+ ++ K+ DFG+SR V VK+ +G ++A E L
Sbjct: 146 DYLSQKQFIHRDLAARNILVGENYVAKIADFGLSR--GQEVYVKKTMGRLPVRWMAIESL 203
Query: 183 SYEPISLATDMWSVGVLAYVLLS-SHSPFAGDNKQETFLNISQCNFSFHEDLFGHISSQA 241
+Y + +D+WS GVL + ++S +P+ G E + + Q + + L + +
Sbjct: 204 NYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGMTCAELYEKLPQ-GYRLEKPL--NCDDEV 260
Query: 242 KDFIQSCLVTDP 253
D ++ C P
Sbjct: 261 YDLMRQCWREKP 272
>pdb|2HEN|A Chain A, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|B Chain B, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|C Chain C, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|D Chain D, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
Length = 286
Score = 55.8 bits (133), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 42/180 (23%), Positives = 79/180 (43%), Gaps = 9/180 (5%)
Query: 53 QMQDILHEAAVLYLAQKSERIVGLHEIYETPHEMVLVLEMVPDGELQRLVDIQDG-IPEQ 111
Q +D L EA+++ ++ L + ++++ E + +G L + DG
Sbjct: 51 QRRDFLSEASIMGQFDHPN-VIHLEGVVTKSTPVMIITEFMENGSLDSFLRQNDGQFTVI 109
Query: 112 DTRSYMKQILEALAFLHDHNITHLDLKPQNILLTKDNNIKLCDFGISRVVNDVVE---VK 168
++ I + +L D N H L +NIL+ + K+ DFG+SR + D
Sbjct: 110 QLVGMLRGIAAGMKYLADMNYVHRALAARNILVNSNLVCKVSDFGLSRFLEDDTSDPTYT 169
Query: 169 EIIGTP---DYVAPEVLSYEPISLATDMWSVGVLAYVLLS-SHSPFAGDNKQETFLNISQ 224
+G + APE + Y + A+D+WS G++ + ++S P+ Q+ I Q
Sbjct: 170 SALGGKIPIRWTAPEAIQYRKFTSASDVWSYGIVMWEVMSYGERPYWDMTNQDVINAIEQ 229
>pdb|3OZ6|A Chain A, Crystal Structure Of Mapk From Cryptosporidium Parvum,
Cgd2_1960
pdb|3OZ6|B Chain B, Crystal Structure Of Mapk From Cryptosporidium Parvum,
Cgd2_1960
Length = 388
Score = 55.8 bits (133), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 64/257 (24%), Positives = 111/257 (43%), Gaps = 34/257 (13%)
Query: 20 SRGKFASVRKCTHKITKVEYAAKFIRKRRRSMDQMQDILHEAAVLYLAQKSERIVGLHEI 79
+G + V K + T A K I ++ Q E +L E IV L +
Sbjct: 18 GKGAYGIVWKSIDRRTGEVVAVKKIFDAFQNSTDAQRTFREIMILTELSGHENIVNLLNV 77
Query: 80 Y--ETPHEMVLVLEMVPDGELQRLVDIQDGIPEQDTRSYM-KQILEALAFLHDHNITHLD 136
+ ++ LV + + + +L + I+ I E + Y+ Q+++ + +LH + H D
Sbjct: 78 LRADNDRDVYLVFDYM-ETDLHAV--IRANILEPVHKQYVVYQLIKVIKYLHSGGLLHRD 134
Query: 137 LKPQNILLTKDNNIKLCDFGISR--------------VVNDVVE--------VKEIIGTP 174
+KP NILL + ++K+ DFG+SR +N+ E + + + T
Sbjct: 135 MKPSNILLNAECHVKVADFGLSRSFVNIRRVTNNIPLSINENTENFDDDQPILTDYVATR 194
Query: 175 DYVAPEV-LSYEPISLATDMWSVGVLAYVLLSSHSPFAGD---NKQETFLNISQCNFSFH 230
Y APE+ L + DMWS+G + +L F G N+ E + + +F +
Sbjct: 195 WYRAPEILLGSTKYTKGIDMWSLGCILGEILCGKPIFPGSSTMNQLERIIGV--IDFPSN 252
Query: 231 EDLFGHISSQAKDFIQS 247
ED+ S AK I+S
Sbjct: 253 EDVESIQSPFAKTMIES 269
>pdb|3CD3|A Chain A, Crystal Structure Of Phosphorylated Human Feline Sarcoma
Viral Oncogene Homologue (V-Fes) In Complex With
Staurosporine And A Consensus Peptide
Length = 377
Score = 55.8 bits (133), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 54/208 (25%), Positives = 90/208 (43%), Gaps = 15/208 (7%)
Query: 20 SRGKFASVRKCTHKITKVEYAAKFIRKRRRSMDQMQDILHEAAVL--YLAQKSERIVGLH 77
RG F V + A K R+ D L EA +L Y R++G
Sbjct: 123 GRGNFGEVFSGRLRADNTLVAVKSCRETL-PPDLKAKFLQEARILKQYSHPNIVRLIG-- 179
Query: 78 EIYETPHEMVLVLEMVPDGELQRLVDIQDGIPEQDTRSYMKQILEALA---FLHDHNITH 134
+ + +V+E+V G+ + + ++ ++ + +A A +L H
Sbjct: 180 -VCTQKQPIYIVMELVQGGDFLTFLRTEGA--RLRVKTLLQMVGDAAAGMEYLESKCCIH 236
Query: 135 LDLKPQNILLTKDNNIKLCDFGISRVVNDVVEVKE--IIGTP-DYVAPEVLSYEPISLAT 191
DL +N L+T+ N +K+ DFG+SR D V + P + APE L+Y S +
Sbjct: 237 RDLAARNCLVTEKNVLKISDFGMSREEADGVXAASGGLRQVPVKWTAPEALNYGRYSSES 296
Query: 192 DMWSVGVLAYVLLS-SHSPFAGDNKQET 218
D+WS G+L + S SP+ + Q+T
Sbjct: 297 DVWSFGILLWETFSLGASPYPNLSNQQT 324
>pdb|2R4B|A Chain A, Erbb4 Kinase Domain Complexed With A Thienopyrimidine
Inhibitor
pdb|2R4B|B Chain B, Erbb4 Kinase Domain Complexed With A Thienopyrimidine
Inhibitor
Length = 321
Score = 55.8 bits (133), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 39/135 (28%), Positives = 72/135 (53%), Gaps = 5/135 (3%)
Query: 88 LVLEMVPDGELQRLV-DIQDGIPEQDTRSYMKQILEALAFLHDHNITHLDLKPQNILLTK 146
LV +++P G L V + +D I Q ++ QI + + +L + + H DL +N+L+
Sbjct: 116 LVTQLMPHGCLLEYVHEHKDNIGSQLLLNWCVQIAKGMMYLEERRLVHRDLAARNVLVKS 175
Query: 147 DNNIKLCDFGISRVV-NDVVEVKEIIGT-P-DYVAPEVLSYEPISLATDMWSVGVLAYVL 203
N++K+ DFG++R++ D E G P ++A E + Y + +D+WS GV + L
Sbjct: 176 PNHVKITDFGLARLLEGDEKEYNADGGKMPIKWMALECIHYRKFTHQSDVWSYGVTIWEL 235
Query: 204 LS-SHSPFAGDNKQE 217
++ P+ G +E
Sbjct: 236 MTFGGKPYDGIPTRE 250
>pdb|3ZZW|A Chain A, Crystal Structure Of The Kinase Domain Of Ror2
pdb|3ZZW|B Chain B, Crystal Structure Of The Kinase Domain Of Ror2
Length = 289
Score = 55.8 bits (133), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 31/120 (25%), Positives = 61/120 (50%), Gaps = 6/120 (5%)
Query: 104 IQDGIPEQDTRSYMKQILEALAFLHDHNITHLDLKPQNILLTKDNNIKLCDFGISRVVND 163
++ + D + QI + +L H++ H DL +N+L+ N+K+ D G+ R V
Sbjct: 121 VKSALEPPDFVHLVAQIAAGMEYLSSHHVVHKDLATRNVLVYDKLNVKISDLGLFREVY- 179
Query: 164 VVEVKEIIGTP----DYVAPEVLSYEPISLATDMWSVGVLAYVLLS-SHSPFAGDNKQET 218
+ +++G ++APE + Y S+ +D+WS GV+ + + S P+ G + Q+
Sbjct: 180 AADYYKLLGNSLLPIRWMAPEAIMYGKFSIDSDIWSYGVVLWEVFSYGLQPYCGYSNQDV 239
>pdb|3BBT|B Chain B, Crystal Structure Of The Erbb4 Kinase In Complex With
Lapatinib
pdb|3BBT|D Chain D, Crystal Structure Of The Erbb4 Kinase In Complex With
Lapatinib
pdb|3BBW|B Chain B, Crystal Structure Of The Erbb4 Kinase In Its Inactive
Conformation
pdb|3BBW|A Chain A, Crystal Structure Of The Erbb4 Kinase In Its Inactive
Conformation
pdb|3BCE|A Chain A, Crystal Structure Of The Erbb4 Kinase
pdb|3BCE|B Chain B, Crystal Structure Of The Erbb4 Kinase
pdb|3BCE|C Chain C, Crystal Structure Of The Erbb4 Kinase
Length = 328
Score = 55.8 bits (133), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 37/130 (28%), Positives = 69/130 (53%), Gaps = 5/130 (3%)
Query: 88 LVLEMVPDGELQRLV-DIQDGIPEQDTRSYMKQILEALAFLHDHNITHLDLKPQNILLTK 146
LV +++P G L V + +D I Q ++ QI + + +L + + H DL +N+L+
Sbjct: 93 LVTQLMPHGCLLEYVHEHKDNIGSQLLLNWCVQIAKGMMYLEERRLVHRDLAARNVLVKS 152
Query: 147 DNNIKLCDFGISRVV-NDVVEVKEIIGTP--DYVAPEVLSYEPISLATDMWSVGVLAYVL 203
N++K+ DFG++R++ D E G ++A E + Y + +D+WS GV + L
Sbjct: 153 PNHVKITDFGLARLLEGDEKEYNADGGKMPIKWMALECIHYRKFTHQSDVWSYGVTIWEL 212
Query: 204 LS-SHSPFAG 212
++ P+ G
Sbjct: 213 MTFGGKPYDG 222
>pdb|4GT4|A Chain A, Structure Of Unliganded, Inactive Ror2 Kinase Domain
pdb|4GT4|B Chain B, Structure Of Unliganded, Inactive Ror2 Kinase Domain
Length = 308
Score = 55.5 bits (132), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 31/120 (25%), Positives = 61/120 (50%), Gaps = 6/120 (5%)
Query: 104 IQDGIPEQDTRSYMKQILEALAFLHDHNITHLDLKPQNILLTKDNNIKLCDFGISRVVND 163
++ + D + QI + +L H++ H DL +N+L+ N+K+ D G+ R V
Sbjct: 138 VKSALEPPDFVHLVAQIAAGMEYLSSHHVVHKDLATRNVLVYDKLNVKISDLGLFREVY- 196
Query: 164 VVEVKEIIGTP----DYVAPEVLSYEPISLATDMWSVGVLAYVLLS-SHSPFAGDNKQET 218
+ +++G ++APE + Y S+ +D+WS GV+ + + S P+ G + Q+
Sbjct: 197 AADYYKLLGNSLLPIRWMAPEAIMYGKFSIDSDIWSYGVVLWEVFSYGLQPYCGYSNQDV 256
>pdb|2I0V|A Chain A, C-Fms Tyrosine Kinase In Complex With A Quinolone
Inhibitor
pdb|2I0Y|A Chain A, Cfms Tyrosine Kinase (Fgf Kid) In Complex With An
Arylamide Inhibitor
pdb|3DPK|A Chain A, Cfms Tyrosine Kinase In Complex With A Pyridopyrimidinone
Inhibitor
pdb|3KRJ|A Chain A, Cfms Tyrosine Kinase In Complex With
4-Cyano-1h-Imidazole-2-Carboxylic Acid
(2-Cyclohex-1-Enyl-4-Piperidin-4-Yl-Phenyl)-Amide
pdb|3KRL|A Chain A, Cfms Tyrosine Kinase In Complex With
5-Cyano-Furan-2-Carboxylic Acid
[4-(4-Methyl-Piperazin-1-Yl)-2-Piperidin-1-Yl-Phenyl]-
Amide
Length = 335
Score = 55.5 bits (132), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 38/153 (24%), Positives = 74/153 (48%), Gaps = 6/153 (3%)
Query: 105 QDGIPEQDTRSYMKQILEALAFLHDHNITHLDLKPQNILLTKDNNIKLCDFGISR-VVND 163
++ + +D + Q+ + +AFL N H D+ +N+LLT + K+ DFG++R ++ND
Sbjct: 160 EEQLSSRDLLHFSSQVAQGMAFLASKNCIHRDVAARNVLLTNGHVAKIGDFGLARDIMND 219
Query: 164 V-VEVKEIIGTP-DYVAPEVLSYEPISLATDMWSVGVLAYVLLS-SHSPFAGDNKQETFL 220
VK P ++APE + ++ +D+WS G+L + + S +P+ G F
Sbjct: 220 SNYIVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFSLGLNPYPGILVNSKFY 279
Query: 221 NISQCNFSFHEDLFGHISSQAKDFIQSCLVTDP 253
+ + + + F +Q+C +P
Sbjct: 280 KLVKDGYQMAQPAFA--PKNIYSIMQACWALEP 310
>pdb|2P0C|A Chain A, Catalytic Domain Of The Proto-Oncogene Tyrosine-Protein
Kina
pdb|2P0C|B Chain B, Catalytic Domain Of The Proto-Oncogene Tyrosine-Protein
Kina
pdb|3BRB|A Chain A, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Tyrosine- Protein Kinase Mer In Complex
With Adp
pdb|3BRB|B Chain B, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Tyrosine- Protein Kinase Mer In Complex
With Adp
pdb|3BPR|A Chain A, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|B Chain B, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|C Chain C, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|D Chain D, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3TCP|A Chain A, Crystal Structure Of The Catalytic Domain Of The
Proto-Oncogene Tyrosine-Protein Kinase Mer In Complex
With Inhibitor Unc569
pdb|3TCP|B Chain B, Crystal Structure Of The Catalytic Domain Of The
Proto-Oncogene Tyrosine-Protein Kinase Mer In Complex
With Inhibitor Unc569
Length = 313
Score = 55.5 bits (132), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 63/259 (24%), Positives = 108/259 (41%), Gaps = 36/259 (13%)
Query: 20 SRGKFASVRKCTHKI---TKVEYAAKFIRKRRRSMDQMQDILHEAAVL--YLAQKSERIV 74
G+F SV + K T ++ A K ++ S ++++ L EAA + + R++
Sbjct: 43 GEGEFGSVMEGNLKQEDGTSLKVAVKTMKLDNSSQREIEEFLSEAACMKDFSHPNVIRLL 102
Query: 75 GL---HEIYETPHEMVLVLEMVPDGELQ------RLVDIQDGIPEQDTRSYMKQILEALA 125
G+ P MV +L + G+L RL IP Q +M I +
Sbjct: 103 GVCIEMSSQGIPKPMV-ILPFMKYGDLHTYLLYSRLETGPKHIPLQTLLKFMVDIALGME 161
Query: 126 FLHDHNITHLDLKPQNILLTKDNNIKLCDFGISRVV--NDVVEVKEIIGTP-DYVAPEVL 182
+L + N H DL +N +L D + + DFG+S+ + D I P ++A E L
Sbjct: 162 YLSNRNFLHRDLAARNCMLRDDMTVCVADFGLSKKIYSGDYYRQGRIAKMPVKWIAIESL 221
Query: 183 SYEPISLATDMWSVGVLAY-VLLSSHSPFAGDNKQETFLNISQCNFSFHEDLFGHISSQA 241
+ + +D+W+ GV + + +P+ G E + ++ H GH Q
Sbjct: 222 ADRVYTSKSDVWAFGVTMWEIATRGMTPYPGVQNHEMY------DYLLH----GHRLKQP 271
Query: 242 KD-------FIQSCLVTDP 253
+D + SC TDP
Sbjct: 272 EDCLDELYEIMYSCWRTDP 290
>pdb|3BEA|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With A
Pyrimidinopyridone Inhibitor
Length = 333
Score = 55.5 bits (132), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 38/147 (25%), Positives = 71/147 (48%), Gaps = 6/147 (4%)
Query: 111 QDTRSYMKQILEALAFLHDHNITHLDLKPQNILLTKDNNIKLCDFGISR-VVNDV-VEVK 168
+D + Q+ + +AFL N H D+ +N+LLT + K+ DFG++R ++ND VK
Sbjct: 164 RDLLHFSSQVAQGMAFLASKNCIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNYIVK 223
Query: 169 EIIGTP-DYVAPEVLSYEPISLATDMWSVGVLAYVLLS-SHSPFAGDNKQETFLNISQCN 226
P ++APE + ++ +D+WS G+L + + S +P+ G F + +
Sbjct: 224 GNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFSLGLNPYPGILVNSKFYKLVKDG 283
Query: 227 FSFHEDLFGHISSQAKDFIQSCLVTDP 253
+ + F +Q+C +P
Sbjct: 284 YQMAQPAFA--PKNIYSIMQACWALEP 308
>pdb|2I1M|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With An
Arylamide Inhibitor
Length = 333
Score = 55.1 bits (131), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 38/147 (25%), Positives = 71/147 (48%), Gaps = 6/147 (4%)
Query: 111 QDTRSYMKQILEALAFLHDHNITHLDLKPQNILLTKDNNIKLCDFGISR-VVNDV-VEVK 168
+D + Q+ + +AFL N H D+ +N+LLT + K+ DFG++R ++ND VK
Sbjct: 164 RDLLHFSSQVAQGMAFLASKNCIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNYIVK 223
Query: 169 EIIGTP-DYVAPEVLSYEPISLATDMWSVGVLAYVLLS-SHSPFAGDNKQETFLNISQCN 226
P ++APE + ++ +D+WS G+L + + S +P+ G F + +
Sbjct: 224 GNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFSLGLNPYPGILVNSKFYKLVKDG 283
Query: 227 FSFHEDLFGHISSQAKDFIQSCLVTDP 253
+ + F +Q+C +P
Sbjct: 284 YQMAQPAFA--PKNIYSIMQACWALEP 308
>pdb|3BKB|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)
pdb|3CBL|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (v- Fes) In Complex With Staurosporine And A
Consensus Peptide
pdb|4E93|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)in Complex With Tae684
Length = 377
Score = 55.1 bits (131), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 54/208 (25%), Positives = 90/208 (43%), Gaps = 15/208 (7%)
Query: 20 SRGKFASVRKCTHKITKVEYAAKFIRKRRRSMDQMQDILHEAAVL--YLAQKSERIVGLH 77
RG F V + A K R+ D L EA +L Y R++G
Sbjct: 123 GRGNFGEVFSGRLRADNTLVAVKSCRETL-PPDLKAKFLQEARILKQYSHPNIVRLIG-- 179
Query: 78 EIYETPHEMVLVLEMVPDGELQRLVDIQDGIPEQDTRSYMKQILEALA---FLHDHNITH 134
+ + +V+E+V G+ + + ++ ++ + +A A +L H
Sbjct: 180 -VCTQKQPIYIVMELVQGGDFLTFLRTEGA--RLRVKTLLQMVGDAAAGMEYLESKCCIH 236
Query: 135 LDLKPQNILLTKDNNIKLCDFGISRVVNDVVEVKE--IIGTP-DYVAPEVLSYEPISLAT 191
DL +N L+T+ N +K+ DFG+SR D V + P + APE L+Y S +
Sbjct: 237 RDLAARNCLVTEKNVLKISDFGMSREEADGVYAASGGLRQVPVKWTAPEALNYGRYSSES 296
Query: 192 DMWSVGVLAYVLLS-SHSPFAGDNKQET 218
D+WS G+L + S SP+ + Q+T
Sbjct: 297 DVWSFGILLWETFSLGASPYPNLSNQQT 324
>pdb|4ANM|A Chain A, Complex Of Ck2 With A Cdc7 Inhibitor
Length = 335
Score = 55.1 bits (131), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 38/157 (24%), Positives = 76/157 (48%), Gaps = 8/157 (5%)
Query: 73 IVGLHEIYETPHEMV--LVLEMVPDGELQRLVDIQDGIPEQDTRSYMKQILEALAFLHDH 130
IV L +I H L+ E V + + + L + + D R Y+ ++L+AL + H
Sbjct: 90 IVKLLDIVRDQHSKTPSLIFEYVNNTDFKVLYPT---LTDYDIRYYIYELLKALDYCHSQ 146
Query: 131 NITHLDLKPQNILLTKD-NNIKLCDFGISRVVNDVVEVKEIIGTPDYVAPEVL-SYEPIS 188
I H D+KP N+++ + ++L D+G++ + E + + + PE+L +
Sbjct: 147 GIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEYNVRVASRYFKGPELLVDLQDYD 206
Query: 189 LATDMWSVGVLAYVLLSSHSP-FAGDNKQETFLNISQ 224
+ DMWS+G + ++ P F G + + + I++
Sbjct: 207 YSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAK 243
>pdb|4AW5|A Chain A, Complex Of The Ephb4 Kinase Domain With An Oxindole
Inhibitor
Length = 291
Score = 55.1 bits (131), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 41/180 (22%), Positives = 85/180 (47%), Gaps = 9/180 (5%)
Query: 53 QMQDILHEAAVLYLAQKSERIVGLHEIYETPHEMVLVLEMVPDGELQRLVDIQDG-IPEQ 111
Q ++ L EA+++ + I+ L + ++++ E + +G L + + DG
Sbjct: 58 QRREFLSEASIMGQFEHPN-IIRLEGVVTNSMPVMILTEFMENGALDSFLRLNDGQFTVI 116
Query: 112 DTRSYMKQILEALAFLHDHNITHLDLKPQNILLTKDNNIKLCDFGISRVV----NDVVEV 167
++ I + +L + + H DL +NIL+ + K+ DFG+SR + +D
Sbjct: 117 QLVGMLRGIASGMRYLAEMSYVHRDLAARNILVNSNLVCKVSDFGLSRFLEENSSDPTYT 176
Query: 168 KEIIGT-P-DYVAPEVLSYEPISLATDMWSVGVLAYVLLS-SHSPFAGDNKQETFLNISQ 224
+ G P + APE +++ + A+D WS G++ + ++S P+ + Q+ I Q
Sbjct: 177 SSLGGKIPIRWTAPEAIAFRKFTSASDAWSYGIVMWEVMSFGERPYWDMSNQDVINAIEQ 236
>pdb|1M2P|A Chain A, Crystal Structure Of 1,8-Di-Hydroxy-4-Nitro-
AnthraquinoneCK2 KINASE COMPLEX
pdb|4DGO|A Chain A, Crystal Structure Of Maize Ck2 In Complex With Tyrphostin
Ag99
Length = 325
Score = 55.1 bits (131), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 38/157 (24%), Positives = 76/157 (48%), Gaps = 8/157 (5%)
Query: 73 IVGLHEIYETPHEMV--LVLEMVPDGELQRLVDIQDGIPEQDTRSYMKQILEALAFLHDH 130
IV L +I H L+ E V + + + L + + D R Y+ ++L+AL + H
Sbjct: 88 IVKLLDIVRDQHSKTPSLIFEYVNNTDFKVLYPT---LTDYDIRYYIYELLKALDYCHSQ 144
Query: 131 NITHLDLKPQNILLTKD-NNIKLCDFGISRVVNDVVEVKEIIGTPDYVAPEVL-SYEPIS 188
I H D+KP N+++ + ++L D+G++ + E + + + PE+L +
Sbjct: 145 GIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEYNVRVASRYFKGPELLVDLQDYD 204
Query: 189 LATDMWSVGVLAYVLLSSHSP-FAGDNKQETFLNISQ 224
+ DMWS+G + ++ P F G + + + I++
Sbjct: 205 YSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAK 241
>pdb|1DS5|A Chain A, Dimeric Crystal Structure Of The Alpha Subunit In Complex
With Two Beta Peptides Mimicking The Architecture Of The
Tetrameric Protein Kinase Ck2 Holoenzyme.
pdb|1DS5|B Chain B, Dimeric Crystal Structure Of The Alpha Subunit In Complex
With Two Beta Peptides Mimicking The Architecture Of The
Tetrameric Protein Kinase Ck2 Holoenzyme.
pdb|1DS5|C Chain C, Dimeric Crystal Structure Of The Alpha Subunit In Complex
With Two Beta Peptides Mimicking The Architecture Of The
Tetrameric Protein Kinase Ck2 Holoenzyme.
pdb|1DS5|D Chain D, Dimeric Crystal Structure Of The Alpha Subunit In Complex
With Two Beta Peptides Mimicking The Architecture Of The
Tetrameric Protein Kinase Ck2 Holoenzyme.
pdb|1F0Q|A Chain A, Crystal Structure Of The Alpha Subunit Of Protein Kinase
Ck2 In Complex With The Nucleotide Competitive Inhibitor
Emodin
pdb|1J91|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Atp-Competitive Inhibitor 4,5,6,7-
Tetrabromobenzotriazole
pdb|1J91|B Chain B, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Atp-Competitive Inhibitor 4,5,6,7-
Tetrabromobenzotriazole
pdb|1JAM|A Chain A, Crystal Structure Of Apo-Form Of Z. Mays Ck2 Protein
Kinase Alpha Subunit
pdb|1LP4|A Chain A, Crystal Structure Of A Binary Complex Of The Catalytic
Subunit Of Protein Kinase Ck2 With Mg-Amppnp
pdb|1LPU|A Chain A, Low Temperature Crystal Structure Of The Apo-Form Of The
Catalytic Subunit Of Protein Kinase Ck2 From Zea Mays
pdb|1LR4|A Chain A, Room Temperature Crystal Structure Of The Apo-Form Of The
Catalytic Subunit Of Protein Kinase Ck2 From Zea Mays
pdb|1OM1|A Chain A, Crystal Structure Of Maize Ck2 Alpha In Complex With Iqa
pdb|1ZOE|A Chain A, Crystal Structure Of Protein Kinase Ck2 In Complex With
Tbb- Derivatives Inhibitors
pdb|1ZOG|A Chain A, Crystal Structure Of Protein Kinase Ck2 In Complex With
Tbb- Derivatives
pdb|1ZOH|A Chain A, Crystal Structure Of Protein Kinase Ck2 In Complex With
Tbb- Derivatives Inhibitors
pdb|2OXD|A Chain A, Protein Kinase Ck2 In Complex With
Tetrabromobenzoimidazole K17, K22 And K32 Inhibitors
pdb|2OXX|A Chain A, Protein Kinase Ck2 In Complex With
Tetrabromobenzoimidazole Derivatives K17, K22 And K32
pdb|2OXY|A Chain A, Protein Kinase Ck2 In Complex With
Tetrabromobenzoimidazole Derivatives K17, K22 And K32
pdb|2OXY|B Chain B, Protein Kinase Ck2 In Complex With
Tetrabromobenzoimidazole Derivatives K17, K22 And K32
pdb|3PWD|A Chain A, Crystal Structure Of Maize Ck2 In Complex With Nbc (Z1)
Length = 332
Score = 54.7 bits (130), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 38/157 (24%), Positives = 76/157 (48%), Gaps = 8/157 (5%)
Query: 73 IVGLHEIYETPHEMV--LVLEMVPDGELQRLVDIQDGIPEQDTRSYMKQILEALAFLHDH 130
IV L +I H L+ E V + + + L + + D R Y+ ++L+AL + H
Sbjct: 89 IVKLLDIVRDQHSKTPSLIFEYVNNTDFKVLYPT---LTDYDIRYYIYELLKALDYCHSQ 145
Query: 131 NITHLDLKPQNILLTKD-NNIKLCDFGISRVVNDVVEVKEIIGTPDYVAPEVL-SYEPIS 188
I H D+KP N+++ + ++L D+G++ + E + + + PE+L +
Sbjct: 146 GIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEYNVRVASRYFKGPELLVDLQDYD 205
Query: 189 LATDMWSVGVLAYVLLSSHSP-FAGDNKQETFLNISQ 224
+ DMWS+G + ++ P F G + + + I++
Sbjct: 206 YSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAK 242
>pdb|4ASZ|A Chain A, Crystal Structure Of Apo Trkb Kinase Domain
pdb|4AT3|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Cpd5n
pdb|4AT4|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Ex429
pdb|4AT5|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Gw2580
Length = 299
Score = 54.7 bits (130), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 47/198 (23%), Positives = 90/198 (45%), Gaps = 17/198 (8%)
Query: 44 IRKRRRSMDQMQDILHEAAVLYLAQKSERIVGLHEIYETPHEMVLVLEMVPDGELQRL-- 101
++ + + D + H A L + E IV + + +++V E + G+L +
Sbjct: 48 VKTLKDASDNARKDFHREAELLTNLQHEHIVKFYGVCVEGDPLIMVFEYMKHGDLNKFLR 107
Query: 102 ------VDIQDGIPEQD-TRSYM----KQILEALAFLHDHNITHLDLKPQNILLTKDNNI 150
V + +G P + T+S M +QI + +L + H DL +N L+ ++ +
Sbjct: 108 AHGPDAVLMAEGNPPTELTQSQMLHIAQQIAAGMVYLASQHFVHRDLATRNCLVGENLLV 167
Query: 151 KLCDFGISRVV--NDVVEVKEIIGTP-DYVAPEVLSYEPISLATDMWSVGVLAYVLLS-S 206
K+ DFG+SR V D V P ++ PE + Y + +D+WS+GV+ + + +
Sbjct: 168 KIGDFGMSRDVYSTDYYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSLGVVLWEIFTYG 227
Query: 207 HSPFAGDNKQETFLNISQ 224
P+ + E I+Q
Sbjct: 228 KQPWYQLSNNEVIECITQ 245
>pdb|2QC6|A Chain A, Protein Kinase Ck2 In Complex With Dbc
pdb|3FL5|A Chain A, Protein Kinase Ck2 In Complex With The Inhibitor
Quinalizarin
pdb|3PZH|A Chain A, Crystal Structure Of Maize Ck2 Alpha In Complex With
Emodin At 1.92 A Resolution
Length = 332
Score = 54.7 bits (130), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 38/158 (24%), Positives = 76/158 (48%), Gaps = 8/158 (5%)
Query: 73 IVGLHEIYETPHEMV--LVLEMVPDGELQRLVDIQDGIPEQDTRSYMKQILEALAFLHDH 130
IV L +I H L+ E V + + + L + + D R Y+ ++L+AL + H
Sbjct: 89 IVKLLDIVRDQHSKTPSLIFEYVNNTDFKVLYPT---LTDYDIRYYIYELLKALDYCHSQ 145
Query: 131 NITHLDLKPQNILLTKD-NNIKLCDFGISRVVNDVVEVKEIIGTPDYVAPEVL-SYEPIS 188
I H D+KP N+++ + ++L D+G++ + E + + + PE+L +
Sbjct: 146 GIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEYNVRVASRYFKGPELLVDLQDYD 205
Query: 189 LATDMWSVGVLAYVLLSSHSP-FAGDNKQETFLNISQC 225
+ DMWS+G + ++ P F G + + + I++
Sbjct: 206 YSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKV 243
>pdb|3PVG|A Chain A, Crystal Structure Of Z. Mays Ck2 Alpha Subunit In Complex
With The Inhibitor
4,5,6,7-Tetrabromo-1-Carboxymethylbenzimidazole (K68)
Length = 331
Score = 54.7 bits (130), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 38/158 (24%), Positives = 76/158 (48%), Gaps = 8/158 (5%)
Query: 73 IVGLHEIYETPHEMV--LVLEMVPDGELQRLVDIQDGIPEQDTRSYMKQILEALAFLHDH 130
IV L +I H L+ E V + + + L + + D R Y+ ++L+AL + H
Sbjct: 88 IVKLLDIVRDQHSKTPSLIFEYVNNTDFKVLYPT---LTDYDIRYYIYELLKALDYCHSQ 144
Query: 131 NITHLDLKPQNILLTKD-NNIKLCDFGISRVVNDVVEVKEIIGTPDYVAPEVL-SYEPIS 188
I H D+KP N+++ + ++L D+G++ + E + + + PE+L +
Sbjct: 145 GIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEYNVRVASRYFKGPELLVDLQDYD 204
Query: 189 LATDMWSVGVLAYVLLSSHSP-FAGDNKQETFLNISQC 225
+ DMWS+G + ++ P F G + + + I++
Sbjct: 205 YSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKV 242
>pdb|1DAW|A Chain A, Crystal Structure Of A Binary Complex Of Protein Kinase
Ck2 (Alpha-Subunit) And Mg-Amppnp
pdb|1DAY|A Chain A, Crystal Structure Of A Binary Complex Of Protein Kinase
Ck2 (Alpha-Subunit) And Mg-Gmppnp
pdb|1M2Q|A Chain A, Crystal Structure Of 1,8-Di-Hydroxy-4-Nitro-Xanten-9-
OneCK2 KINASE COMPLEX
pdb|1M2R|A Chain A, Crystal Structure Of 5,8-Di-Amino-1,4-Di-Hydroxy-
AnthraquinoneCK2 KINASE COMPLEX
pdb|3KXM|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Inhibitor K74
pdb|3KXN|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Inhibitor Tetraiodobenzimidazole (K88)
Length = 327
Score = 54.7 bits (130), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 38/157 (24%), Positives = 76/157 (48%), Gaps = 8/157 (5%)
Query: 73 IVGLHEIYETPHEMV--LVLEMVPDGELQRLVDIQDGIPEQDTRSYMKQILEALAFLHDH 130
IV L +I H L+ E V + + + L + + D R Y+ ++L+AL + H
Sbjct: 88 IVKLLDIVRDQHSKTPSLIFEYVNNTDFKVLYPT---LTDYDIRYYIYELLKALDYCHSQ 144
Query: 131 NITHLDLKPQNILLTKD-NNIKLCDFGISRVVNDVVEVKEIIGTPDYVAPEVL-SYEPIS 188
I H D+KP N+++ + ++L D+G++ + E + + + PE+L +
Sbjct: 145 GIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEYNVRVASRYFKGPELLVDLQDYD 204
Query: 189 LATDMWSVGVLAYVLLSSHSP-FAGDNKQETFLNISQ 224
+ DMWS+G + ++ P F G + + + I++
Sbjct: 205 YSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAK 241
>pdb|2PVH|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|2PVJ|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|2PVK|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|2PVL|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|2PVM|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|2PVN|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|3BE9|A Chain A, Structure-Based Design And Synthesis Of Novel Macrocyclic
Pyrazolo[1,5-A] [1,3,5]triazine Compounds As Potent
Inhibitors Of Protein Kinase Ck2 And Their Anticancer
Activities
Length = 352
Score = 54.7 bits (130), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 38/158 (24%), Positives = 76/158 (48%), Gaps = 8/158 (5%)
Query: 73 IVGLHEIYETPHEMV--LVLEMVPDGELQRLVDIQDGIPEQDTRSYMKQILEALAFLHDH 130
IV L +I H L+ E V + + + L + + D R Y+ ++L+AL + H
Sbjct: 109 IVKLLDIVRDQHSKTPSLIFEYVNNTDFKVLYPT---LTDYDIRYYIYELLKALDYCHSQ 165
Query: 131 NITHLDLKPQNILLTKD-NNIKLCDFGISRVVNDVVEVKEIIGTPDYVAPEVL-SYEPIS 188
I H D+KP N+++ + ++L D+G++ + E + + + PE+L +
Sbjct: 166 GIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEYNVRVASRYFKGPELLVDLQDYD 225
Query: 189 LATDMWSVGVLAYVLLSSHSP-FAGDNKQETFLNISQC 225
+ DMWS+G + ++ P F G + + + I++
Sbjct: 226 YSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKV 263
>pdb|3KXG|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Inhibitor
3,4,5,6,7-Pentabromo-1h-Indazole (K64)
pdb|3KXH|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Inhibitor
(2-Dymethylammino-4,5,6,7-Tetrabromobenzoimidazol-1yl-
Acetic Acid (K66)
Length = 327
Score = 54.7 bits (130), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 38/158 (24%), Positives = 76/158 (48%), Gaps = 8/158 (5%)
Query: 73 IVGLHEIYETPHEMV--LVLEMVPDGELQRLVDIQDGIPEQDTRSYMKQILEALAFLHDH 130
IV L +I H L+ E V + + + L + + D R Y+ ++L+AL + H
Sbjct: 88 IVKLLDIVRDQHSKTPSLIFEYVNNTDFKVLYPT---LTDYDIRYYIYELLKALDYCHSQ 144
Query: 131 NITHLDLKPQNILLTKD-NNIKLCDFGISRVVNDVVEVKEIIGTPDYVAPEVL-SYEPIS 188
I H D+KP N+++ + ++L D+G++ + E + + + PE+L +
Sbjct: 145 GIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEYNVRVASRYFKGPELLVDLQDYD 204
Query: 189 LATDMWSVGVLAYVLLSSHSP-FAGDNKQETFLNISQC 225
+ DMWS+G + ++ P F G + + + I++
Sbjct: 205 YSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKV 242
>pdb|4DGN|A Chain A, Crystal Structure Of Maize Ck2 In Complex With The
Inhibitor Luteolin
Length = 326
Score = 54.7 bits (130), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 38/158 (24%), Positives = 76/158 (48%), Gaps = 8/158 (5%)
Query: 73 IVGLHEIYETPHEMV--LVLEMVPDGELQRLVDIQDGIPEQDTRSYMKQILEALAFLHDH 130
IV L +I H L+ E V + + + L + + D R Y+ ++L+AL + H
Sbjct: 88 IVKLLDIVRDQHSKTPSLIFEYVNNTDFKVLYPT---LTDYDIRYYIYELLKALDYCHSQ 144
Query: 131 NITHLDLKPQNILLTKD-NNIKLCDFGISRVVNDVVEVKEIIGTPDYVAPEVL-SYEPIS 188
I H D+KP N+++ + ++L D+G++ + E + + + PE+L +
Sbjct: 145 GIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEYNVRVASRYFKGPELLVDLQDYD 204
Query: 189 LATDMWSVGVLAYVLLSSHSP-FAGDNKQETFLNISQC 225
+ DMWS+G + ++ P F G + + + I++
Sbjct: 205 YSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKV 242
>pdb|4DGM|A Chain A, Crystal Structure Of Maize Ck2 In Complex With The
Inhibitor Apigenin
Length = 326
Score = 54.7 bits (130), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 38/158 (24%), Positives = 76/158 (48%), Gaps = 8/158 (5%)
Query: 73 IVGLHEIYETPHEMV--LVLEMVPDGELQRLVDIQDGIPEQDTRSYMKQILEALAFLHDH 130
IV L +I H L+ E V + + + L + + D R Y+ ++L+AL + H
Sbjct: 88 IVKLLDIVRDQHSKTPSLIFEYVNNTDFKVLYPT---LTDYDIRYYIYELLKALDYCHSQ 144
Query: 131 NITHLDLKPQNILLTKD-NNIKLCDFGISRVVNDVVEVKEIIGTPDYVAPEVL-SYEPIS 188
I H D+KP N+++ + ++L D+G++ + E + + + PE+L +
Sbjct: 145 GIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEYNVRVASRYFKGPELLVDLQDYD 204
Query: 189 LATDMWSVGVLAYVLLSSHSP-FAGDNKQETFLNISQC 225
+ DMWS+G + ++ P F G + + + I++
Sbjct: 205 YSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKV 242
>pdb|3RP9|A Chain A, Crystal Structure Of The Apo Mapk From Toxoplasma Gondii,
25.M01780 Or Tgme49_007820
Length = 458
Score = 54.3 bits (129), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 41/150 (27%), Positives = 73/150 (48%), Gaps = 30/150 (20%)
Query: 85 EMVLVLEMVPDGELQRLVDIQDGIPEQDTRSYMKQILEALAFLHDHNITHLDLKPQNILL 144
E+ +VLE+ D + ++L + E ++ + +L + ++H I H DLKP N L+
Sbjct: 131 ELYVVLEIA-DSDFKKLFRTPVYLTELHIKTLLYNLLVGVKYVHSAGILHRDLKPANCLV 189
Query: 145 TKDNNIKLCDFGISRVV------NDVVEV-------------------KEIIG---TPDY 176
+D ++K+CDFG++R V N + + +++ G T Y
Sbjct: 190 NQDCSVKVCDFGLARTVDYPENGNSQLPISPREDDMNLVTFPHTKNLKRQLTGHVVTRWY 249
Query: 177 VAPE-VLSYEPISLATDMWSVGVLAYVLLS 205
APE +L E + A D+WS+G + LL+
Sbjct: 250 RAPELILLQENYTEAIDVWSIGCIFAELLN 279
>pdb|2WQB|A Chain A, Structure Of The Tie2 Kinase Domain In Complex With A
Thiazolopyrimidine Inhibitor
Length = 324
Score = 54.3 bits (129), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 59/252 (23%), Positives = 100/252 (39%), Gaps = 25/252 (9%)
Query: 22 GKFASVRKCTHKITKVEYAAKFIR-KRRRSMDQMQDILHEAAVLYLAQKSERIVGLHEIY 80
G F V K K + A R K S D +D E VL I+ L
Sbjct: 33 GNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINLLGAC 92
Query: 81 ETPHEMVLVLEMVPDGEL------QRLVDIQDG----------IPEQDTRSYMKQILEAL 124
E + L +E P G L R+++ + Q + + +
Sbjct: 93 EHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGM 152
Query: 125 AFLHDHNITHLDLKPQNILLTKDNNIKLCDFGISRVVNDVVEVKEIIGT--PDYVAPEVL 182
+L H +L +NIL+ ++ K+ DFG+SR V VK+ +G ++A E L
Sbjct: 153 DYLSQKQFIHRNLAARNILVGENYVAKIADFGLSR--GQEVYVKKTMGRLPVRWMAIESL 210
Query: 183 SYEPISLATDMWSVGVLAYVLLS-SHSPFAGDNKQETFLNISQCNFSFHEDLFGHISSQA 241
+Y + +D+WS GVL + ++S +P+ G E + + Q + + L + +
Sbjct: 211 NYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGMTCAELYEKLPQ-GYRLEKPL--NCDDEV 267
Query: 242 KDFIQSCLVTDP 253
D ++ C P
Sbjct: 268 YDLMRQCWREKP 279
>pdb|3QUP|A Chain A, Inhibitor Bound Structure Of The Kinase Domain Of The
Murine Receptor Tyrosine Kinase Tyro3 (Sky)
Length = 323
Score = 53.9 bits (128), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 51/221 (23%), Positives = 100/221 (45%), Gaps = 20/221 (9%)
Query: 18 MPSRGKFASVRKCTHKI---TKVEYAAKFIRKRRRSMDQMQDILHEAAVL--YLAQKSER 72
M +G+F SVR+ K + V+ A K ++ + +++ L EAA + + +
Sbjct: 30 MLGKGEFGSVREAQLKQEDGSFVKVAVKMLKADIIASSDIEEFLREAACMKEFDHPHVAK 89
Query: 73 IVGL----HEIYETPHEMVLVLEMVPDGELQ------RLVDIQDGIPEQDTRSYMKQILE 122
+VG+ P MV +L + G+L R+ + +P Q +M I
Sbjct: 90 LVGVSLRSRAKGRLPIPMV-ILPFMKHGDLHAFLLASRIGENPFNLPLQTLVRFMVDIAC 148
Query: 123 ALAFLHDHNITHLDLKPQNILLTKDNNIKLCDFGISRVVNDVVEVKEIIGTP---DYVAP 179
+ +L N H DL +N +L +D + + DFG+SR + ++ + ++A
Sbjct: 149 GMEYLSSRNFIHRDLAARNCMLAEDMTVCVADFGLSRKIYSGDYYRQGCASKLPVKWLAL 208
Query: 180 EVLSYEPISLATDMWSVGVLAY-VLLSSHSPFAGDNKQETF 219
E L+ ++ +D+W+ GV + ++ +P+AG E +
Sbjct: 209 ESLADNLYTVHSDVWAFGVTMWEIMTRGQTPYAGIENAEIY 249
>pdb|3SVV|A Chain A, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
pdb|3SVV|B Chain B, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
Length = 286
Score = 53.9 bits (128), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 35/138 (25%), Positives = 61/138 (44%), Gaps = 6/138 (4%)
Query: 119 QILEALAFLHDHNITHLDLKPQNILLTKDNNIKLCDFGISRVVND-VVEVKEIIGTP-DY 176
QI +A++ N H DL+ NIL+ ++ K+ DFG++R++ D ++ P +
Sbjct: 122 QIASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKW 181
Query: 177 VAPEVLSYEPISLATDMWSVGVLAYVLLS-SHSPFAGDNKQETFLNISQCNFSFHEDLFG 235
APE Y ++ +D+WS G+L L + P+ G +E + Q +
Sbjct: 182 TAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREV---LDQVERGYRMPCPP 238
Query: 236 HISSQAKDFIQSCLVTDP 253
D + C DP
Sbjct: 239 ECPESLHDLMCQCWRKDP 256
>pdb|2HWO|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWO|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWP|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2HWP|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2QLQ|A Chain A, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|2QLQ|B Chain B, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|3F3T|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3T|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3U|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3U|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3V|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3F3V|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3G5D|A Chain A, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3G5D|B Chain B, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3TZ7|A Chain A, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ7|B Chain B, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ8|A Chain A, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ8|B Chain B, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ9|A Chain A, Kinase Domain Of Csrc In Complex With Rl130
pdb|3TZ9|B Chain B, Kinase Domain Of Csrc In Complex With Rl130
Length = 286
Score = 53.9 bits (128), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 35/138 (25%), Positives = 61/138 (44%), Gaps = 6/138 (4%)
Query: 119 QILEALAFLHDHNITHLDLKPQNILLTKDNNIKLCDFGISRVVND-VVEVKEIIGTP-DY 176
QI +A++ N H DL+ NIL+ ++ K+ DFG++R++ D ++ P +
Sbjct: 122 QIASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKW 181
Query: 177 VAPEVLSYEPISLATDMWSVGVLAYVLLS-SHSPFAGDNKQETFLNISQCNFSFHEDLFG 235
APE Y ++ +D+WS G+L L + P+ G +E + Q +
Sbjct: 182 TAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREV---LDQVERGYRMPCPP 238
Query: 236 HISSQAKDFIQSCLVTDP 253
D + C DP
Sbjct: 239 ECPESLHDLMCQCWRKDP 256
>pdb|2QQ7|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QQ7|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QI8|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|2QI8|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|3F3W|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3F3W|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3LOK|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
pdb|3LOK|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
Length = 286
Score = 53.9 bits (128), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 35/138 (25%), Positives = 61/138 (44%), Gaps = 6/138 (4%)
Query: 119 QILEALAFLHDHNITHLDLKPQNILLTKDNNIKLCDFGISRVVND-VVEVKEIIGTP-DY 176
QI +A++ N H DL+ NIL+ ++ K+ DFG++R++ D ++ P +
Sbjct: 122 QIASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKW 181
Query: 177 VAPEVLSYEPISLATDMWSVGVLAYVLLS-SHSPFAGDNKQETFLNISQCNFSFHEDLFG 235
APE Y ++ +D+WS G+L L + P+ G +E + Q +
Sbjct: 182 TAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREV---LDQVERGYRMPCPP 238
Query: 236 HISSQAKDFIQSCLVTDP 253
D + C DP
Sbjct: 239 ECPESLHDLMCQCWRKDP 256
>pdb|3TL8|A Chain A, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|D Chain D, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|G Chain G, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|H Chain H, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
Length = 349
Score = 53.9 bits (128), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 42/138 (30%), Positives = 68/138 (49%), Gaps = 9/138 (6%)
Query: 82 TPHEMVLVLEMVPDGELQR-LVDIQDGIPEQDTRSYMKQIL---EALAFLHDH---NITH 134
TP E +LV + +G + L + + P D + L LA+LHDH I H
Sbjct: 106 TPTERLLVYPYMANGSVASCLRERPESQPPLDWPKRQRIALGSARGLAYLHDHCDPKIIH 165
Query: 135 LDLKPQNILLTKDNNIKLCDFGISRVVN--DVVEVKEIIGTPDYVAPEVLSYEPISLATD 192
D+K NILL ++ + DFG++++++ D + GT ++APE LS S TD
Sbjct: 166 RDVKAANILLDEEFEAVVGDFGLAKLMDYKDXHVXXAVRGTIGHIAPEYLSTGKSSEKTD 225
Query: 193 MWSVGVLAYVLLSSHSPF 210
++ GV+ L++ F
Sbjct: 226 VFGYGVMLLELITGQRAF 243
>pdb|3DQW|A Chain A, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|B Chain B, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|C Chain C, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|D Chain D, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
Length = 286
Score = 53.9 bits (128), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 35/138 (25%), Positives = 61/138 (44%), Gaps = 6/138 (4%)
Query: 119 QILEALAFLHDHNITHLDLKPQNILLTKDNNIKLCDFGISRVVND-VVEVKEIIGTP-DY 176
QI +A++ N H DL+ NIL+ ++ K+ DFG++R++ D ++ P +
Sbjct: 122 QIASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEXTARQGAKFPIKW 181
Query: 177 VAPEVLSYEPISLATDMWSVGVLAYVLLS-SHSPFAGDNKQETFLNISQCNFSFHEDLFG 235
APE Y ++ +D+WS G+L L + P+ G +E + Q +
Sbjct: 182 TAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREV---LDQVERGYRMPCPP 238
Query: 236 HISSQAKDFIQSCLVTDP 253
D + C DP
Sbjct: 239 ECPESLHDLMCQCWRKDP 256
>pdb|2OIQ|A Chain A, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|2OIQ|B Chain B, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|3D7T|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3DQX|A Chain A, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3DQX|B Chain B, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3EN4|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN4|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN5|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN5|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN6|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN6|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN7|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EN7|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EL7|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 3
pdb|3EL8|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3EL8|B Chain B, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3F6X|A Chain A, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|B Chain B, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|C Chain C, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|D Chain D, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3G6G|A Chain A, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|3G6G|B Chain B, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|4AGW|A Chain A, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|4AGW|B Chain B, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|3UQF|A Chain A, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQF|B Chain B, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQG|A Chain A, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|3UQG|B Chain B, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|4DGG|A Chain A, C-Src Kinase Domain In Complex With Rm-1-176
pdb|4DGG|B Chain B, C-Src Kinase Domain In Complex With Rm-1-176
Length = 286
Score = 53.9 bits (128), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 35/138 (25%), Positives = 61/138 (44%), Gaps = 6/138 (4%)
Query: 119 QILEALAFLHDHNITHLDLKPQNILLTKDNNIKLCDFGISRVVND-VVEVKEIIGTP-DY 176
QI +A++ N H DL+ NIL+ ++ K+ DFG++R++ D ++ P +
Sbjct: 122 QIASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKW 181
Query: 177 VAPEVLSYEPISLATDMWSVGVLAYVLLS-SHSPFAGDNKQETFLNISQCNFSFHEDLFG 235
APE Y ++ +D+WS G+L L + P+ G +E + Q +
Sbjct: 182 TAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREV---LDQVERGYRMPCPP 238
Query: 236 HISSQAKDFIQSCLVTDP 253
D + C DP
Sbjct: 239 ECPESLHDLMCQCWRKDP 256
>pdb|3G6H|A Chain A, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
pdb|3G6H|B Chain B, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
Length = 286
Score = 53.9 bits (128), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 35/138 (25%), Positives = 61/138 (44%), Gaps = 6/138 (4%)
Query: 119 QILEALAFLHDHNITHLDLKPQNILLTKDNNIKLCDFGISRVVND-VVEVKEIIGTP-DY 176
QI +A++ N H DL+ NIL+ ++ K+ DFG++R++ D ++ P +
Sbjct: 122 QIASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKW 181
Query: 177 VAPEVLSYEPISLATDMWSVGVLAYVLLS-SHSPFAGDNKQETFLNISQCNFSFHEDLFG 235
APE Y ++ +D+WS G+L L + P+ G +E + Q +
Sbjct: 182 TAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREV---LDQVERGYRMPCPP 238
Query: 236 HISSQAKDFIQSCLVTDP 253
D + C DP
Sbjct: 239 ECPESLHDLMCQCWRKDP 256
>pdb|3OEZ|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OEZ|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OF0|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3OF0|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3QLF|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLF|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLG|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
pdb|3QLG|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
Length = 286
Score = 53.5 bits (127), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 35/138 (25%), Positives = 61/138 (44%), Gaps = 6/138 (4%)
Query: 119 QILEALAFLHDHNITHLDLKPQNILLTKDNNIKLCDFGISRVVND-VVEVKEIIGTP-DY 176
QI +A++ N H DL+ NIL+ ++ K+ DFG++R++ D ++ P +
Sbjct: 122 QIASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKW 181
Query: 177 VAPEVLSYEPISLATDMWSVGVLAYVLLS-SHSPFAGDNKQETFLNISQCNFSFHEDLFG 235
APE Y ++ +D+WS G+L L + P+ G +E + Q +
Sbjct: 182 TAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREV---LDQVERGYRMPCPP 238
Query: 236 HISSQAKDFIQSCLVTDP 253
D + C DP
Sbjct: 239 ECPESLHDLMCQCWRKDP 256
>pdb|3LL6|A Chain A, Crystal Structure Of The Human Cyclin G Associated Kinase
(gak)
pdb|3LL6|B Chain B, Crystal Structure Of The Human Cyclin G Associated Kinase
(gak)
Length = 337
Score = 53.5 bits (127), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 37/115 (32%), Positives = 54/115 (46%), Gaps = 18/115 (15%)
Query: 119 QILEALAFLHDHN--ITHLDLKPQNILLTKDNNIKLCDFGISRVVNDVVE---------- 166
Q A+ +H I H DLK +N+LL+ IKLCDFG + ++ +
Sbjct: 144 QTCRAVQHMHRQKPPIIHRDLKVENLLLSNQGTIKLCDFGSATTISHYPDYSWSAQRRAL 203
Query: 167 VKEII---GTPDYVAPEVL---SYEPISLATDMWSVGVLAYVLLSSHSPFAGDNK 215
V+E I TP Y PE++ S PI D+W++G + Y+L PF K
Sbjct: 204 VEEEITRNTTPMYRTPEIIDLYSNFPIGEKQDIWALGCILYLLCFRQHPFEDGAK 258
>pdb|3U4W|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc4b
pdb|3U51|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
pdb|3U51|B Chain B, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
Length = 275
Score = 53.5 bits (127), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 35/138 (25%), Positives = 61/138 (44%), Gaps = 6/138 (4%)
Query: 119 QILEALAFLHDHNITHLDLKPQNILLTKDNNIKLCDFGISRVVND-VVEVKEIIGTP-DY 176
QI +A++ N H DL+ NIL+ ++ K+ DFG++R++ D ++ P +
Sbjct: 111 QIASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKW 170
Query: 177 VAPEVLSYEPISLATDMWSVGVLAYVLLS-SHSPFAGDNKQETFLNISQCNFSFHEDLFG 235
APE Y ++ +D+WS G+L L + P+ G +E + Q +
Sbjct: 171 TAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREV---LDQVERGYRMPCPP 227
Query: 236 HISSQAKDFIQSCLVTDP 253
D + C DP
Sbjct: 228 ECPESLHDLMCQCWRKDP 245
>pdb|3D7U|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|D Chain D, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 277
Score = 53.5 bits (127), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 35/138 (25%), Positives = 61/138 (44%), Gaps = 6/138 (4%)
Query: 119 QILEALAFLHDHNITHLDLKPQNILLTKDNNIKLCDFGISRVVND-VVEVKEIIGTP-DY 176
QI +A++ N H DL+ NIL+ ++ K+ DFG++R++ D ++ P +
Sbjct: 113 QIASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKW 172
Query: 177 VAPEVLSYEPISLATDMWSVGVLAYVLLS-SHSPFAGDNKQETFLNISQCNFSFHEDLFG 235
APE Y ++ +D+WS G+L L + P+ G +E + Q +
Sbjct: 173 TAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREV---LDQVERGYRMPCPP 229
Query: 236 HISSQAKDFIQSCLVTDP 253
D + C DP
Sbjct: 230 ECPESLHDLMCQCWRKDP 247
>pdb|1FMK|A Chain A, Crystal Structure Of Human Tyrosine-Protein Kinase C-Src
pdb|2SRC|A Chain A, Crystal Structure Of Human Tyrosine-protein Kinase C-src,
In Complex With Amp-pnp
Length = 452
Score = 53.5 bits (127), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 44/170 (25%), Positives = 81/170 (47%), Gaps = 21/170 (12%)
Query: 55 QDILHEAAVLYLAQKSERIVGLHEIYETPHEMVLVLEMVPDGELQRLVDIQDGIPEQDTR 114
+ L EA V+ + E++V L+ + + + +V E + G L +D G +T
Sbjct: 224 EAFLQEAQVMK-KLRHEKLVQLYAVV-SEEPIYIVTEYMSKGSL---LDFLKG----ETG 274
Query: 115 SYMK---------QILEALAFLHDHNITHLDLKPQNILLTKDNNIKLCDFGISRVVND-V 164
Y++ QI +A++ N H DL+ NIL+ ++ K+ DFG++R++ D
Sbjct: 275 KYLRLPQLVDMAAQIASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNE 334
Query: 165 VEVKEIIGTP-DYVAPEVLSYEPISLATDMWSVGVLAYVLLS-SHSPFAG 212
++ P + APE Y ++ +D+WS G+L L + P+ G
Sbjct: 335 YTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPG 384
>pdb|1Y57|A Chain A, Structure Of Unphosphorylated C-Src In Complex With An
Inhibitor
Length = 452
Score = 53.5 bits (127), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 44/170 (25%), Positives = 81/170 (47%), Gaps = 21/170 (12%)
Query: 55 QDILHEAAVLYLAQKSERIVGLHEIYETPHEMVLVLEMVPDGELQRLVDIQDGIPEQDTR 114
+ L EA V+ + E++V L+ + + + +V E + G L +D G +T
Sbjct: 224 EAFLQEAQVMK-KLRHEKLVQLYAVV-SEEPIYIVTEYMSKGSL---LDFLKG----ETG 274
Query: 115 SYMK---------QILEALAFLHDHNITHLDLKPQNILLTKDNNIKLCDFGISRVVND-V 164
Y++ QI +A++ N H DL+ NIL+ ++ K+ DFG++R++ D
Sbjct: 275 KYLRLPQLVDMAAQIASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNE 334
Query: 165 VEVKEIIGTP-DYVAPEVLSYEPISLATDMWSVGVLAYVLLS-SHSPFAG 212
++ P + APE Y ++ +D+WS G+L L + P+ G
Sbjct: 335 YTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPG 384
>pdb|3PP0|A Chain A, Crystal Structure Of The Kinase Domain Of Human Her2
(Erbb2).
pdb|3PP0|B Chain B, Crystal Structure Of The Kinase Domain Of Human Her2
(Erbb2).
pdb|3RCD|A Chain A, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|B Chain B, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|C Chain C, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|D Chain D, Her2 Kinase Domain Complexed With Tak-285
Length = 338
Score = 53.5 bits (127), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 55/207 (26%), Positives = 100/207 (48%), Gaps = 16/207 (7%)
Query: 22 GKFASVRKCTH----KITKVEYAAKFIRKRRRSMDQMQDILHEAAVLYLAQKS--ERIVG 75
G F +V K + K+ A K +R+ S ++IL EA V+ R++G
Sbjct: 28 GAFGTVYKGIWIPDGENVKIPVAIKVLRENT-SPKANKEILDEAYVMAGVGSPYVSRLLG 86
Query: 76 LHEIYETPHEMVLVLEMVPDGELQRLVDIQDG-IPEQDTRSYMKQILEALAFLHDHNITH 134
+ + LV +++P G L V G + QD ++ QI + +++L D + H
Sbjct: 87 IC----LTSTVQLVTQLMPYGCLLDHVRENRGRLGSQDLLNWCMQIAKGMSYLEDVRLVH 142
Query: 135 LDLKPQNILLTKDNNIKLCDFGISRVVN-DVVEVKEIIG-TP-DYVAPEVLSYEPISLAT 191
DL +N+L+ N++K+ DFG++R+++ D E G P ++A E + + +
Sbjct: 143 RDLAARNVLVKSPNHVKITDFGLARLLDIDETEYHADGGKVPIKWMALESILRRRFTHQS 202
Query: 192 DMWSVGVLAYVLLS-SHSPFAGDNKQE 217
D+WS GV + L++ P+ G +E
Sbjct: 203 DVWSYGVTVWELMTFGAKPYDGIPARE 229
>pdb|3NR9|A Chain A, Structure Of Human Cdc2-Like Kinase 2 (Clk2)
pdb|3NR9|B Chain B, Structure Of Human Cdc2-Like Kinase 2 (Clk2)
pdb|3NR9|C Chain C, Structure Of Human Cdc2-Like Kinase 2 (Clk2)
Length = 368
Score = 53.1 bits (126), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 36/128 (28%), Positives = 55/128 (42%), Gaps = 21/128 (16%)
Query: 109 PEQDTRSYMKQILEALAFLHDHNITHLDLKPQNILL-------------------TKDNN 149
P R Q+ +A+ FLHD+ +TH DLKP+NIL K
Sbjct: 135 PIHQVRHMAFQLCQAVKFLHDNKLTHTDLKPENILFVNSDYELTYNLEKKRDERSVKSTA 194
Query: 150 IKLCDFGISRVVNDVVEVKEIIGTPDYVAPEVLSYEPISLATDMWSVGVLAYVLLSSHSP 209
+++ DFG + D I+ T Y APEV+ S D+WS+G + + +
Sbjct: 195 VRVVDFGSATF--DHEHHSTIVSTRHYRAPEVILELGWSQPCDVWSIGCIIFEYYVGFTL 252
Query: 210 FAGDNKQE 217
F + +E
Sbjct: 253 FQTHDNRE 260
>pdb|1KSW|A Chain A, Structure Of Human C-Src Tyrosine Kinase (Thr338gly
Mutant) In Complex With N6-Benzyl Adp
Length = 452
Score = 53.1 bits (126), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 29/97 (29%), Positives = 51/97 (52%), Gaps = 3/97 (3%)
Query: 119 QILEALAFLHDHNITHLDLKPQNILLTKDNNIKLCDFGISRVVND-VVEVKEIIGTP-DY 176
QI +A++ N H DL+ NIL+ ++ K+ DFG++R++ D ++ P +
Sbjct: 288 QIASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKW 347
Query: 177 VAPEVLSYEPISLATDMWSVGVLAYVLLS-SHSPFAG 212
APE Y ++ +D+WS G+L L + P+ G
Sbjct: 348 TAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPG 384
>pdb|3UIU|A Chain A, Crystal Structure Of Apo-Pkr Kinase Domain
pdb|3UIU|B Chain B, Crystal Structure Of Apo-Pkr Kinase Domain
Length = 306
Score = 53.1 bits (126), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 25/88 (28%), Positives = 47/88 (53%)
Query: 117 MKQILEALAFLHDHNITHLDLKPQNILLTKDNNIKLCDFGISRVVNDVVEVKEIIGTPDY 176
+QI + + ++H + H DLKP NI L +K+ DFG+ + + + GT Y
Sbjct: 142 FEQITKGVDYIHSKKLIHRDLKPSNIFLVDTKQVKIGDFGLVTSLKNDGKRTRSKGTLRY 201
Query: 177 VAPEVLSYEPISLATDMWSVGVLAYVLL 204
++PE +S + D++++G++ LL
Sbjct: 202 MSPEQISSQDYGKEVDLYALGLILAELL 229
>pdb|1YOL|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
pdb|1YOL|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
Length = 283
Score = 53.1 bits (126), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 29/97 (29%), Positives = 51/97 (52%), Gaps = 3/97 (3%)
Query: 119 QILEALAFLHDHNITHLDLKPQNILLTKDNNIKLCDFGISRVVND-VVEVKEIIGTP-DY 176
QI +A++ N H DL+ NIL+ ++ K+ DFG++R++ D ++ P +
Sbjct: 119 QIASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKW 178
Query: 177 VAPEVLSYEPISLATDMWSVGVLAYVLLS-SHSPFAG 212
APE Y ++ +D+WS G+L L + P+ G
Sbjct: 179 TAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPG 215
>pdb|2H8H|A Chain A, Src Kinase In Complex With A Quinazoline Inhibitor
Length = 535
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 29/97 (29%), Positives = 51/97 (52%), Gaps = 3/97 (3%)
Query: 119 QILEALAFLHDHNITHLDLKPQNILLTKDNNIKLCDFGISRVVND-VVEVKEIIGTP-DY 176
QI +A++ N H DL+ NIL+ ++ K+ DFG++R++ D ++ P +
Sbjct: 371 QIASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKW 430
Query: 177 VAPEVLSYEPISLATDMWSVGVLAYVLLS-SHSPFAG 212
APE Y ++ +D+WS G+L L + P+ G
Sbjct: 431 TAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPG 467
>pdb|2BDF|A Chain A, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDF|B Chain B, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDJ|A Chain A, Src Kinase In Complex With Inhibitor Ap23464
Length = 279
Score = 52.8 bits (125), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 29/97 (29%), Positives = 51/97 (52%), Gaps = 3/97 (3%)
Query: 119 QILEALAFLHDHNITHLDLKPQNILLTKDNNIKLCDFGISRVVND-VVEVKEIIGTP-DY 176
QI +A++ N H DL+ NIL+ ++ K+ DFG++R++ D ++ P +
Sbjct: 115 QIASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKW 174
Query: 177 VAPEVLSYEPISLATDMWSVGVLAYVLLS-SHSPFAG 212
APE Y ++ +D+WS G+L L + P+ G
Sbjct: 175 TAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPG 211
>pdb|1YOJ|A Chain A, Crystal Structure Of Src Kinase Domain
pdb|1YOJ|B Chain B, Crystal Structure Of Src Kinase Domain
pdb|1YOM|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
pdb|1YOM|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
Length = 283
Score = 52.8 bits (125), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 29/97 (29%), Positives = 51/97 (52%), Gaps = 3/97 (3%)
Query: 119 QILEALAFLHDHNITHLDLKPQNILLTKDNNIKLCDFGISRVVND-VVEVKEIIGTP-DY 176
QI +A++ N H DL+ NIL+ ++ K+ DFG++R++ D ++ P +
Sbjct: 119 QIASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEWTARQGAKFPIKW 178
Query: 177 VAPEVLSYEPISLATDMWSVGVLAYVLLS-SHSPFAG 212
APE Y ++ +D+WS G+L L + P+ G
Sbjct: 179 TAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPG 215
>pdb|1YI6|A Chain A, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
pdb|1YI6|B Chain B, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
Length = 276
Score = 52.8 bits (125), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 29/97 (29%), Positives = 51/97 (52%), Gaps = 3/97 (3%)
Query: 119 QILEALAFLHDHNITHLDLKPQNILLTKDNNIKLCDFGISRVVND-VVEVKEIIGTP-DY 176
QI +A++ N H DL+ NIL+ ++ K+ DFG++R++ D ++ P +
Sbjct: 112 QIASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEXTARQGAKFPIKW 171
Query: 177 VAPEVLSYEPISLATDMWSVGVLAYVLLS-SHSPFAG 212
APE Y ++ +D+WS G+L L + P+ G
Sbjct: 172 TAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPG 208
>pdb|2PTK|A Chain A, Chicken Src Tyrosine Kinase
Length = 453
Score = 52.8 bits (125), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 29/97 (29%), Positives = 50/97 (51%), Gaps = 3/97 (3%)
Query: 119 QILEALAFLHDHNITHLDLKPQNILLTKDNNIKLCDFGISRVVND-VVEVKEIIGTP-DY 176
QI +A++ N H DL+ NIL+ ++ K+ DFG+ R++ D ++ P +
Sbjct: 289 QIASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLGRLIEDNEYTARQGAKFPIKW 348
Query: 177 VAPEVLSYEPISLATDMWSVGVLAYVLLS-SHSPFAG 212
APE Y ++ +D+WS G+L L + P+ G
Sbjct: 349 TAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPG 385
>pdb|2JIV|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Compex With Hki-272
pdb|2JIV|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Compex With Hki-272
Length = 328
Score = 52.8 bits (125), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 36/132 (27%), Positives = 70/132 (53%), Gaps = 9/132 (6%)
Query: 88 LVLEMVPDGELQRLV-DIQDGIPEQDTRSYMKQILEALAFLHDHNITHLDLKPQNILLTK 146
L+++++P G L V + +D I Q ++ QI + + +L D + H DL +N+L+
Sbjct: 94 LIMQLMPFGXLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRRLVHRDLAARNVLVKT 153
Query: 147 DNNIKLCDFGISRVVNDVVEVKEIIGTPDYVAPEVLSYEPI-----SLATDMWSVGVLAY 201
++K+ DFG+++++ E KE V + ++ E I + +D+WS GV +
Sbjct: 154 PQHVKITDFGLAKLLG--AEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVW 211
Query: 202 VLLSSHS-PFAG 212
L++ S P+ G
Sbjct: 212 ELMTFGSKPYDG 223
>pdb|2EVA|A Chain A, Structural Basis For The Interaction Of Tak1 Kinase With
Its Activating Protein Tab1
pdb|2YIY|A Chain A, Crystal Structure Of Compound 8 Bound To Tak1-Tab
Length = 307
Score = 52.4 bits (124), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 35/132 (26%), Positives = 63/132 (47%), Gaps = 9/132 (6%)
Query: 86 MVLVLEMVPDGELQRLVDIQDGIP---EQDTRSYMKQILEALAFLHDHN---ITHLDLKP 139
+ LV+E G L ++ + +P S+ Q + +A+LH + H DLKP
Sbjct: 74 VCLVMEYAEGGSLYNVLHGAEPLPYYTAAHAMSWCLQCSQGVAYLHSMQPKALIHRDLKP 133
Query: 140 QNILLTKDNNI-KLCDFGISRVVNDVVEVKEIIGTPDYVAPEVLSYEPISLATDMWSVGV 198
N+LL + K+CDFG + + + G+ ++APEV S D++S G+
Sbjct: 134 PNLLLVAGGTVLKICDFGTACDIQ--THMTNNKGSAAWMAPEVFEGSNYSEKCDVFSWGI 191
Query: 199 LAYVLLSSHSPF 210
+ + +++ PF
Sbjct: 192 ILWEVITRRKPF 203
>pdb|3GEQ|A Chain A, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
pdb|3GEQ|B Chain B, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
Length = 286
Score = 52.4 bits (124), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 35/138 (25%), Positives = 60/138 (43%), Gaps = 6/138 (4%)
Query: 119 QILEALAFLHDHNITHLDLKPQNILLTKDNNIKLCDFGISRVVND-VVEVKEIIGTP-DY 176
QI +A++ N H DL NIL+ ++ K+ DFG++R++ D ++ P +
Sbjct: 122 QIASGMAYVERMNYVHRDLAAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKW 181
Query: 177 VAPEVLSYEPISLATDMWSVGVLAYVLLS-SHSPFAGDNKQETFLNISQCNFSFHEDLFG 235
APE Y ++ +D+WS G+L L + P+ G +E + Q +
Sbjct: 182 TAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREV---LDQVERGYRMPCPP 238
Query: 236 HISSQAKDFIQSCLVTDP 253
D + C DP
Sbjct: 239 ECPESLHDLMCQCWRKDP 256
>pdb|4GS6|A Chain A, Irreversible Inhibition Of Tak1 Kinase By 5z-7-oxozeaenol
Length = 315
Score = 52.4 bits (124), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 35/132 (26%), Positives = 63/132 (47%), Gaps = 9/132 (6%)
Query: 86 MVLVLEMVPDGELQRLVDIQDGIP---EQDTRSYMKQILEALAFLHDHN---ITHLDLKP 139
+ LV+E G L ++ + +P S+ Q + +A+LH + H DLKP
Sbjct: 75 VCLVMEYAEGGSLYNVLHGAEPLPYYTAAHAMSWCLQCSQGVAYLHSMQPKALIHRDLKP 134
Query: 140 QNILLTKDNNI-KLCDFGISRVVNDVVEVKEIIGTPDYVAPEVLSYEPISLATDMWSVGV 198
N+LL + K+CDFG + + + G+ ++APEV S D++S G+
Sbjct: 135 PNLLLVAGGTVLKICDFGTACDIQ--THMTNNKGSAAWMAPEVFEGSNYSEKCDVFSWGI 192
Query: 199 LAYVLLSSHSPF 210
+ + +++ PF
Sbjct: 193 ILWEVITRRKPF 204
>pdb|2RFD|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFD|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|C Chain C, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|D Chain D, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
Length = 324
Score = 52.0 bits (123), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 37/132 (28%), Positives = 69/132 (52%), Gaps = 9/132 (6%)
Query: 88 LVLEMVPDGELQRLV-DIQDGIPEQDTRSYMKQILEALAFLHDHNITHLDLKPQNILLTK 146
L+ +++P G L V + +D I Q ++ QI E + +L D + H DL +N+L+
Sbjct: 90 LITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAEGMNYLEDRRLVHRDLAARNVLVKT 149
Query: 147 DNNIKLCDFGISRVVNDVVEVKEIIGTPDYVAPEVLSYEPI-----SLATDMWSVGVLAY 201
++K+ DFG+++++ E KE V + ++ E I + +D+WS GV +
Sbjct: 150 PQHVKITDFGLAKLLG--AEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVW 207
Query: 202 VLLSSHS-PFAG 212
L++ S P+ G
Sbjct: 208 ELMTFGSKPYDG 219
>pdb|1I44|A Chain A, Crystallographic Studies Of An Activation Loop Mutant Of
The Insulin Receptor Tyrosine Kinase
Length = 306
Score = 52.0 bits (123), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 44/218 (20%), Positives = 99/218 (45%), Gaps = 18/218 (8%)
Query: 50 SMDQMQDILHEAAVLYLAQKSERIVGLHEIYETPHEMVLVLEMVPDGELQRLV------- 102
S+ + + L+EA+V+ +V L + ++V+E++ G+L+ +
Sbjct: 60 SLRERIEFLNEASVMK-GFTCHHVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEA 118
Query: 103 DIQDGIPE---QDTRSYMKQILEALAFLHDHNITHLDLKPQNILLTKDNNIKLCDFGISR 159
+ G P Q+ +I + +A+L+ H DL +N ++ D +K+ DFG++R
Sbjct: 119 ENNPGRPPPTLQEMIQMAAEIADGMAYLNAKKFVHRDLAARNCMVAHDFTVKIGDFGMTR 178
Query: 160 VVNDVVEVK---EIIGTPDYVAPEVLSYEPISLATDMWSVGVLAYVLLS-SHSPFAGDNK 215
+ + + + + ++APE L + ++DMWS GV+ + + S + P+ G +
Sbjct: 179 DIYETAYYRKGGKGLLPVRWMAPESLKDGVFTTSSDMWSFGVVLWEITSLAEQPYQGLSN 238
Query: 216 QETFLNISQCNFSFHEDLFGHISSQAKDFIQSCLVTDP 253
++ + + D + + D ++ C +P
Sbjct: 239 EQVLKFVMDGGYLDQPD---NCPERVTDLMRMCWQFNP 273
>pdb|2EXE|A Chain A, Crystal Structure Of The Phosphorylated Clk3
Length = 357
Score = 52.0 bits (123), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 35/128 (27%), Positives = 54/128 (42%), Gaps = 21/128 (16%)
Query: 109 PEQDTRSYMKQILEALAFLHDHNITHLDLKPQNILL-------------------TKDNN 149
P R Q+ AL FLH++ +TH DLKP+NIL K+ +
Sbjct: 130 PLPHVRHMAYQLCHALRFLHENQLTHTDLKPENILFVNSEFETLYNEHKSCEEKSVKNTS 189
Query: 150 IKLCDFGISRVVNDVVEVKEIIGTPDYVAPEVLSYEPISLATDMWSVGVLAYVLLSSHSP 209
I++ DFG + D I+ T Y PEV+ + D+WS+G + + +
Sbjct: 190 IRVADFGSATF--DHEHHTTIVATRHYRPPEVILELGWAQPCDVWSIGCILFEYYRGFTL 247
Query: 210 FAGDNKQE 217
F +E
Sbjct: 248 FQTHENRE 255
>pdb|2EU9|A Chain A, Crystal Structure Of Clk3
Length = 355
Score = 52.0 bits (123), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 41/163 (25%), Positives = 67/163 (41%), Gaps = 22/163 (13%)
Query: 109 PEQDTRSYMKQILEALAFLHDHNITHLDLKPQNILL-------------------TKDNN 149
P R Q+ AL FLH++ +TH DLKP+NIL K+ +
Sbjct: 121 PLPHVRHMAYQLCHALRFLHENQLTHTDLKPENILFVNSEFETLYNEHKSCEEKSVKNTS 180
Query: 150 IKLCDFGISRVVNDVVEVKEIIGTPDYVAPEVLSYEPISLATDMWSVGVLAYVLLSSHSP 209
I++ DFG + D I+ T Y PEV+ + D+WS+G + + +
Sbjct: 181 IRVADFGSATF--DHEHHTTIVATRHYRPPEVILELGWAQPCDVWSIGCILFEYYRGFTL 238
Query: 210 FAGDNKQETFLNISQCNFSFHEDLFGHISSQAKDFIQSCLVTD 252
F +E + + + + H + + K F + LV D
Sbjct: 239 FQTHENREHLVMMEKILGPIPSHMI-HRTRKQKYFYKGGLVWD 280
>pdb|3DKC|A Chain A, Sgx Clone 5698a65kfg1h1
pdb|3DKF|A Chain A, Sgx Clone 5698a65kfg1h1
Length = 317
Score = 52.0 bits (123), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 47/202 (23%), Positives = 89/202 (44%), Gaps = 16/202 (7%)
Query: 20 SRGKFASVRKCTHKITKVEYAAKFIRKRRRSMDQMQDI------LHEAAVLYLAQKSERI 73
RG F C + T ++ K I +S++++ DI L E ++ +
Sbjct: 40 GRGHFG----CVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVL 95
Query: 74 VGLHEIYETPHEMVLVLEMVPDGELQRLVDIQDGIPE-QDTRSYMKQILEALAFLHDHNI 132
L + ++VL + G+L+ + + P +D + Q+ + + FL
Sbjct: 96 SLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKFLASKKF 155
Query: 133 THLDLKPQNILLTKDNNIKLCDFGISRVVN----DVVEVKEIIGTP-DYVAPEVLSYEPI 187
H DL +N +L + +K+ DFG++R + D V K P ++A E L +
Sbjct: 156 VHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALESLQTQKF 215
Query: 188 SLATDMWSVGVLAYVLLSSHSP 209
+ +D+WS GVL + L++ +P
Sbjct: 216 TTKSDVWSFGVLLWELMTRGAP 237
>pdb|3CTH|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Aminopyridine Based Inhibitor
pdb|3CTJ|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Aminopyridine Based Inhibitor
pdb|3CE3|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Pyrrolopyridinepyridone Based Inhibitor
pdb|3F82|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
N-
(4-(2-Amino-3-Chloropyridin-4-Yloxy)-3-Fluorophenyl)-4-
Ethoxy-1-(4-Fluorophenyl)-2-Oxo-1,2-Dihydropyridine-3-
Carboxamide
pdb|3L8V|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepat Growth Factor Receptor C-Met In Complex With A
Biarylamine Inhibitor
Length = 314
Score = 52.0 bits (123), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 47/202 (23%), Positives = 89/202 (44%), Gaps = 16/202 (7%)
Query: 20 SRGKFASVRKCTHKITKVEYAAKFIRKRRRSMDQMQDI------LHEAAVLYLAQKSERI 73
RG F C + T ++ K I +S++++ DI L E ++ +
Sbjct: 39 GRGHFG----CVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVL 94
Query: 74 VGLHEIYETPHEMVLVLEMVPDGELQRLVDIQDGIPE-QDTRSYMKQILEALAFLHDHNI 132
L + ++VL + G+L+ + + P +D + Q+ + + FL
Sbjct: 95 SLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKFLASKKF 154
Query: 133 THLDLKPQNILLTKDNNIKLCDFGISRVVN----DVVEVKEIIGTP-DYVAPEVLSYEPI 187
H DL +N +L + +K+ DFG++R + D V K P ++A E L +
Sbjct: 155 VHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALESLQTQKF 214
Query: 188 SLATDMWSVGVLAYVLLSSHSP 209
+ +D+WS GVL + L++ +P
Sbjct: 215 TTKSDVWSFGVLLWELMTRGAP 236
>pdb|3QTI|A Chain A, C-Met Kinase In Complex With Nvp-Bvu972
pdb|3QTI|B Chain B, C-Met Kinase In Complex With Nvp-Bvu972
Length = 314
Score = 52.0 bits (123), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 47/202 (23%), Positives = 89/202 (44%), Gaps = 16/202 (7%)
Query: 20 SRGKFASVRKCTHKITKVEYAAKFIRKRRRSMDQMQDI------LHEAAVLYLAQKSERI 73
RG F C + T ++ K I +S++++ DI L E ++ +
Sbjct: 39 GRGHFG----CVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVL 94
Query: 74 VGLHEIYETPHEMVLVLEMVPDGELQRLVDIQDGIPE-QDTRSYMKQILEALAFLHDHNI 132
L + ++VL + G+L+ + + P +D + Q+ + + FL
Sbjct: 95 SLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKFLASKKF 154
Query: 133 THLDLKPQNILLTKDNNIKLCDFGISRVVN----DVVEVKEIIGTP-DYVAPEVLSYEPI 187
H DL +N +L + +K+ DFG++R + D V K P ++A E L +
Sbjct: 155 VHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALESLQTQKF 214
Query: 188 SLATDMWSVGVLAYVLLSSHSP 209
+ +D+WS GVL + L++ +P
Sbjct: 215 TTKSDVWSFGVLLWELMTRGAP 236
>pdb|1R0P|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
The Microbial Alkaloid K-252a
pdb|1R1W|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met
Length = 312
Score = 52.0 bits (123), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 47/202 (23%), Positives = 89/202 (44%), Gaps = 16/202 (7%)
Query: 20 SRGKFASVRKCTHKITKVEYAAKFIRKRRRSMDQMQDI------LHEAAVLYLAQKSERI 73
RG F C + T ++ K I +S++++ DI L E ++ +
Sbjct: 37 GRGHFG----CVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVL 92
Query: 74 VGLHEIYETPHEMVLVLEMVPDGELQRLVDIQDGIPE-QDTRSYMKQILEALAFLHDHNI 132
L + ++VL + G+L+ + + P +D + Q+ + + FL
Sbjct: 93 SLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKFLASKKF 152
Query: 133 THLDLKPQNILLTKDNNIKLCDFGISRVVN----DVVEVKEIIGTP-DYVAPEVLSYEPI 187
H DL +N +L + +K+ DFG++R + D V K P ++A E L +
Sbjct: 153 VHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALESLQTQKF 212
Query: 188 SLATDMWSVGVLAYVLLSSHSP 209
+ +D+WS GVL + L++ +P
Sbjct: 213 TTKSDVWSFGVLLWELMTRGAP 234
>pdb|3A4P|A Chain A, Human C-Met Kinase Domain Complexed With
6-Benzyloxyquinoline Inhibitor
Length = 319
Score = 52.0 bits (123), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 47/202 (23%), Positives = 89/202 (44%), Gaps = 16/202 (7%)
Query: 20 SRGKFASVRKCTHKITKVEYAAKFIRKRRRSMDQMQDI------LHEAAVLYLAQKSERI 73
RG F C + T ++ K I +S++++ DI L E ++ +
Sbjct: 44 GRGHFG----CVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVL 99
Query: 74 VGLHEIYETPHEMVLVLEMVPDGELQRLVDIQDGIPE-QDTRSYMKQILEALAFLHDHNI 132
L + ++VL + G+L+ + + P +D + Q+ + + FL
Sbjct: 100 SLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKFLASKKF 159
Query: 133 THLDLKPQNILLTKDNNIKLCDFGISRVVN----DVVEVKEIIGTP-DYVAPEVLSYEPI 187
H DL +N +L + +K+ DFG++R + D V K P ++A E L +
Sbjct: 160 VHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALESLQTQKF 219
Query: 188 SLATDMWSVGVLAYVLLSSHSP 209
+ +D+WS GVL + L++ +P
Sbjct: 220 TTKSDVWSFGVLLWELMTRGAP 241
>pdb|2WU6|A Chain A, Crystal Structure Of The Human Clk3 In Complex With Dki
pdb|2WU7|A Chain A, Crystal Structure Of The Human Clk3 In Complex With V25
pdb|3RAW|A Chain A, Crystal Structure Of Human Cdc-Like Kinase 3 Isoform In
Complex With Leucettine L41
pdb|3RAW|B Chain B, Crystal Structure Of Human Cdc-Like Kinase 3 Isoform In
Complex With Leucettine L41
Length = 381
Score = 52.0 bits (123), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 35/128 (27%), Positives = 54/128 (42%), Gaps = 21/128 (16%)
Query: 109 PEQDTRSYMKQILEALAFLHDHNITHLDLKPQNILL-------------------TKDNN 149
P R Q+ AL FLH++ +TH DLKP+NIL K+ +
Sbjct: 153 PLPHVRHMAYQLCHALRFLHENQLTHTDLKPENILFVNSEFETLYNEHKSCEEKSVKNTS 212
Query: 150 IKLCDFGISRVVNDVVEVKEIIGTPDYVAPEVLSYEPISLATDMWSVGVLAYVLLSSHSP 209
I++ DFG + D I+ T Y PEV+ + D+WS+G + + +
Sbjct: 213 IRVADFGSATF--DHEHHTTIVATRHYRPPEVILELGWAQPCDVWSIGCILFEYYRGFTL 270
Query: 210 FAGDNKQE 217
F +E
Sbjct: 271 FQTHENRE 278
>pdb|3UIM|A Chain A, Structural Basis For The Impact Of Phosphorylation On
Plant Receptor- Like Kinase Bak1 Activation
pdb|3ULZ|A Chain A, Crystal Structure Of Apo Bak1
Length = 326
Score = 51.6 bits (122), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 41/138 (29%), Positives = 67/138 (48%), Gaps = 9/138 (6%)
Query: 82 TPHEMVLVLEMVPDGELQR-LVDIQDGIPEQDTRSYMKQIL---EALAFLHDH---NITH 134
TP E +LV + +G + L + + P D + L LA+LHDH I H
Sbjct: 98 TPTERLLVYPYMANGSVASCLRERPESQPPLDWPKRQRIALGSARGLAYLHDHCDPKIIH 157
Query: 135 LDLKPQNILLTKDNNIKLCDFGISRVVN--DVVEVKEIIGTPDYVAPEVLSYEPISLATD 192
D+K NILL ++ + DFG++++++ D + G ++APE LS S TD
Sbjct: 158 RDVKAANILLDEEFEAVVGDFGLAKLMDYKDXHVXXAVRGXIGHIAPEYLSTGKSSEKTD 217
Query: 193 MWSVGVLAYVLLSSHSPF 210
++ GV+ L++ F
Sbjct: 218 VFGYGVMLLELITGQRAF 235
>pdb|3FBV|A Chain A, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|B Chain B, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|C Chain C, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|D Chain D, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|E Chain E, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|F Chain F, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|G Chain G, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|H Chain H, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|I Chain I, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|J Chain J, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|K Chain K, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|L Chain L, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|M Chain M, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|N Chain N, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3SDM|A Chain A, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|B Chain B, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|C Chain C, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|D Chain D, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|E Chain E, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|F Chain F, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|G Chain G, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
Length = 448
Score = 51.6 bits (122), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 47/164 (28%), Positives = 74/164 (45%), Gaps = 27/164 (16%)
Query: 115 SYMKQILEALAFLHDHNITHLDLKPQNILLTKDN-------------NIKLCDFGISRVV 161
S ++QI +A LH I H DLKPQNIL++ + I + DFG+ + +
Sbjct: 137 SLLRQIASGVAHLHSLKIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLCKKL 196
Query: 162 ND-----VVEVKEIIGTPDYVAPEVL---SYEPISLATDMWSVG-VLAYVLLSSHSPFAG 212
+ + GT + APE+L + ++ + D++S+G V Y+L PF
Sbjct: 197 DSGQXXFRXNLNNPSGTSGWRAPELLEESTKRRLTRSIDIFSMGCVFYYILSKGKHPFGD 256
Query: 213 DNKQETFLNISQCNFSFHEDLFGHISS---QAKDFIQSCLVTDP 253
+E+ NI + FS E H S +A D I + DP
Sbjct: 257 KYSRES--NIIRGIFSLDEMKCLHDRSLIAEATDLISQMIDHDP 298
>pdb|3C1X|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Pyrrolotriazine Based Inhibitor
Length = 373
Score = 51.6 bits (122), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 47/202 (23%), Positives = 89/202 (44%), Gaps = 16/202 (7%)
Query: 20 SRGKFASVRKCTHKITKVEYAAKFIRKRRRSMDQMQDI------LHEAAVLYLAQKSERI 73
RG F C + T ++ K I +S++++ DI L E ++ +
Sbjct: 98 GRGHFG----CVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVL 153
Query: 74 VGLHEIYETPHEMVLVLEMVPDGELQRLVDIQDGIPE-QDTRSYMKQILEALAFLHDHNI 132
L + ++VL + G+L+ + + P +D + Q+ + + FL
Sbjct: 154 SLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKFLASKKF 213
Query: 133 THLDLKPQNILLTKDNNIKLCDFGISRVVN----DVVEVKEIIGTP-DYVAPEVLSYEPI 187
H DL +N +L + +K+ DFG++R + D V K P ++A E L +
Sbjct: 214 VHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALESLQTQKF 273
Query: 188 SLATDMWSVGVLAYVLLSSHSP 209
+ +D+WS GVL + L++ +P
Sbjct: 274 TTKSDVWSFGVLLWELMTRGAP 295
>pdb|3SDJ|A Chain A, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|B Chain B, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|C Chain C, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|D Chain D, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|E Chain E, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|F Chain F, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|G Chain G, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|H Chain H, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|I Chain I, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|J Chain J, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|K Chain K, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|L Chain L, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|M Chain M, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|N Chain N, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
Length = 448
Score = 51.6 bits (122), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 47/164 (28%), Positives = 74/164 (45%), Gaps = 27/164 (16%)
Query: 115 SYMKQILEALAFLHDHNITHLDLKPQNILLTKDN-------------NIKLCDFGISRVV 161
S ++QI +A LH I H DLKPQNIL++ + I + DFG+ + +
Sbjct: 137 SLLRQIASGVAHLHSLKIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLCKKL 196
Query: 162 ND-----VVEVKEIIGTPDYVAPEVL---SYEPISLATDMWSVG-VLAYVLLSSHSPFAG 212
+ + GT + APE+L + ++ + D++S+G V Y+L PF
Sbjct: 197 DSGQXXFRXNLNNPSGTSGWRAPELLEESTKRRLTRSIDIFSMGCVFYYILSKGKHPFGD 256
Query: 213 DNKQETFLNISQCNFSFHEDLFGHISS---QAKDFIQSCLVTDP 253
+E+ NI + FS E H S +A D I + DP
Sbjct: 257 KYSRES--NIIRGIFSLDEMKCLHDRSLIAEATDLISQMIDHDP 298
>pdb|1IR3|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex
With Peptide Substrate And Atp Analog
pdb|1GAG|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With A Bisubstrate Inhibitor
Length = 306
Score = 51.6 bits (122), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 44/218 (20%), Positives = 99/218 (45%), Gaps = 18/218 (8%)
Query: 50 SMDQMQDILHEAAVLYLAQKSERIVGLHEIYETPHEMVLVLEMVPDGELQRLV------- 102
S+ + + L+EA+V+ +V L + ++V+E++ G+L+ +
Sbjct: 60 SLRERIEFLNEASVMK-GFTCHHVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEA 118
Query: 103 DIQDGIPE---QDTRSYMKQILEALAFLHDHNITHLDLKPQNILLTKDNNIKLCDFGISR 159
+ G P Q+ +I + +A+L+ H DL +N ++ D +K+ DFG++R
Sbjct: 119 ENNPGRPPPTLQEMIQMAAEIADGMAYLNAKKFVHRDLAARNCMVAHDFTVKIGDFGMTR 178
Query: 160 VVNDVVEVK---EIIGTPDYVAPEVLSYEPISLATDMWSVGVLAYVLLS-SHSPFAGDNK 215
+ + + + + ++APE L + ++DMWS GV+ + + S + P+ G +
Sbjct: 179 DIXETDXXRKGGKGLLPVRWMAPESLKDGVFTTSSDMWSFGVVLWEITSLAEQPYQGLSN 238
Query: 216 QETFLNISQCNFSFHEDLFGHISSQAKDFIQSCLVTDP 253
++ + + D + + D ++ C +P
Sbjct: 239 EQVLKFVMDGGYLDQPD---NCPERVTDLMRMCWQFNP 273
>pdb|3UG1|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN The Apo Form
pdb|3UG2|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN Complex With Gefitinib
pdb|3VJN|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN Complex With Amppnp
Length = 334
Score = 51.6 bits (122), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 36/132 (27%), Positives = 70/132 (53%), Gaps = 9/132 (6%)
Query: 88 LVLEMVPDGELQRLV-DIQDGIPEQDTRSYMKQILEALAFLHDHNITHLDLKPQNILLTK 146
L+++++P G L V + +D I Q ++ QI + + +L D + H DL +N+L+
Sbjct: 100 LIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRRLVHRDLAARNVLVKT 159
Query: 147 DNNIKLCDFGISRVVNDVVEVKEIIGTPDYVAPEVLSYEPI-----SLATDMWSVGVLAY 201
++K+ DFG+++++ E KE V + ++ E I + +D+WS GV +
Sbjct: 160 PQHVKITDFGLAKLLG--AEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVW 217
Query: 202 VLLSSHS-PFAG 212
L++ S P+ G
Sbjct: 218 ELMTFGSKPYDG 229
>pdb|4I24|A Chain A, Structure Of T790m Egfr Kinase Domain Co-crystallized With
Dacomitinib
pdb|4I24|B Chain B, Structure Of T790m Egfr Kinase Domain Co-crystallized With
Dacomitinib
Length = 329
Score = 51.6 bits (122), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 36/132 (27%), Positives = 70/132 (53%), Gaps = 9/132 (6%)
Query: 88 LVLEMVPDGELQRLV-DIQDGIPEQDTRSYMKQILEALAFLHDHNITHLDLKPQNILLTK 146
L+++++P G L V + +D I Q ++ QI + + +L D + H DL +N+L+
Sbjct: 95 LIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRRLVHRDLAARNVLVKT 154
Query: 147 DNNIKLCDFGISRVVNDVVEVKEIIGTPDYVAPEVLSYEPI-----SLATDMWSVGVLAY 201
++K+ DFG+++++ E KE V + ++ E I + +D+WS GV +
Sbjct: 155 PQHVKITDFGLAKLLG--AEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVW 212
Query: 202 VLLSSHS-PFAG 212
L++ S P+ G
Sbjct: 213 ELMTFGSKPYDG 224
>pdb|1RQQ|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With The Sh2 Domain Of Aps
pdb|1RQQ|B Chain B, Crystal Structure Of The Insulin Receptor Kinase In
Complex With The Sh2 Domain Of Aps
pdb|2AUH|A Chain A, Crystal Structure Of The Grb14 Bps Region In Complex With
The Insulin Receptor Tyrosine Kinase
pdb|2B4S|B Chain B, Crystal Structure Of A Complex Between Ptp1b And The
Insulin Receptor Tyrosine Kinase
pdb|2B4S|D Chain D, Crystal Structure Of A Complex Between Ptp1b And The
Insulin Receptor Tyrosine Kinase
pdb|3BU3|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Peptide
pdb|3BU5|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Peptide And Atp
pdb|3BU6|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Phosphopeptide
Length = 306
Score = 51.6 bits (122), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 44/218 (20%), Positives = 99/218 (45%), Gaps = 18/218 (8%)
Query: 50 SMDQMQDILHEAAVLYLAQKSERIVGLHEIYETPHEMVLVLEMVPDGELQRLV------- 102
S+ + + L+EA+V+ +V L + ++V+E++ G+L+ +
Sbjct: 60 SLRERIEFLNEASVMK-GFTCHHVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEA 118
Query: 103 DIQDGIPE---QDTRSYMKQILEALAFLHDHNITHLDLKPQNILLTKDNNIKLCDFGISR 159
+ G P Q+ +I + +A+L+ H DL +N ++ D +K+ DFG++R
Sbjct: 119 ENNPGRPPPTLQEMIQMAAEIADGMAYLNAKKFVHRDLAARNCMVAHDFTVKIGDFGMTR 178
Query: 160 VVNDVVEVK---EIIGTPDYVAPEVLSYEPISLATDMWSVGVLAYVLLS-SHSPFAGDNK 215
+ + + + + ++APE L + ++DMWS GV+ + + S + P+ G +
Sbjct: 179 DIXETDXXRKGGKGLLPVRWMAPESLKDGVFTTSSDMWSFGVVLWEITSLAEQPYQGLSN 238
Query: 216 QETFLNISQCNFSFHEDLFGHISSQAKDFIQSCLVTDP 253
++ + + D + + D ++ C +P
Sbjct: 239 EQVLKFVMDGGYLDQPD---NCPERVTDLMRMCWQFNP 273
>pdb|4G5P|A Chain A, Crystal Structure Of Egfr Kinase T790m In Complex With
Bibw2992
pdb|4G5P|B Chain B, Crystal Structure Of Egfr Kinase T790m In Complex With
Bibw2992
Length = 330
Score = 51.6 bits (122), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 36/132 (27%), Positives = 70/132 (53%), Gaps = 9/132 (6%)
Query: 88 LVLEMVPDGELQRLV-DIQDGIPEQDTRSYMKQILEALAFLHDHNITHLDLKPQNILLTK 146
L+++++P G L V + +D I Q ++ QI + + +L D + H DL +N+L+
Sbjct: 96 LIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRRLVHRDLAARNVLVKT 155
Query: 147 DNNIKLCDFGISRVVNDVVEVKEIIGTPDYVAPEVLSYEPI-----SLATDMWSVGVLAY 201
++K+ DFG+++++ E KE V + ++ E I + +D+WS GV +
Sbjct: 156 PQHVKITDFGLAKLLG--AEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVW 213
Query: 202 VLLSSHS-PFAG 212
L++ S P+ G
Sbjct: 214 ELMTFGSKPYDG 225
>pdb|2Z8C|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex
With (4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin-2-
Yl]amino}phenyl)acetic Acid
Length = 303
Score = 51.6 bits (122), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 44/218 (20%), Positives = 99/218 (45%), Gaps = 18/218 (8%)
Query: 50 SMDQMQDILHEAAVLYLAQKSERIVGLHEIYETPHEMVLVLEMVPDGELQRLV------- 102
S+ + + L+EA+V+ +V L + ++V+E++ G+L+ +
Sbjct: 57 SLRERIEFLNEASVMK-GFTCHHVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEA 115
Query: 103 DIQDGIPE---QDTRSYMKQILEALAFLHDHNITHLDLKPQNILLTKDNNIKLCDFGISR 159
+ G P Q+ +I + +A+L+ H DL +N ++ D +K+ DFG++R
Sbjct: 116 ENNPGRPPPTLQEMIQMAAEIADGMAYLNAKKFVHRDLAARNCMVAHDFTVKIGDFGMTR 175
Query: 160 VVNDVVEVK---EIIGTPDYVAPEVLSYEPISLATDMWSVGVLAYVLLS-SHSPFAGDNK 215
+ + + + + ++APE L + ++DMWS GV+ + + S + P+ G +
Sbjct: 176 DIXETDXXRKGGKGLLPVRWMAPESLKDGVFTTSSDMWSFGVVLWEITSLAEQPYQGLSN 235
Query: 216 QETFLNISQCNFSFHEDLFGHISSQAKDFIQSCLVTDP 253
++ + + D + + D ++ C +P
Sbjct: 236 EQVLKFVMDGGYLDQPD---NCPERVTDLMRMCWQFNP 270
>pdb|2JIT|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation
pdb|2JIT|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation
Length = 327
Score = 51.6 bits (122), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 36/132 (27%), Positives = 70/132 (53%), Gaps = 9/132 (6%)
Query: 88 LVLEMVPDGELQRLV-DIQDGIPEQDTRSYMKQILEALAFLHDHNITHLDLKPQNILLTK 146
L+++++P G L V + +D I Q ++ QI + + +L D + H DL +N+L+
Sbjct: 93 LIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRRLVHRDLAARNVLVKT 152
Query: 147 DNNIKLCDFGISRVVNDVVEVKEIIGTPDYVAPEVLSYEPI-----SLATDMWSVGVLAY 201
++K+ DFG+++++ E KE V + ++ E I + +D+WS GV +
Sbjct: 153 PQHVKITDFGLAKLLG--AEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVW 210
Query: 202 VLLSSHS-PFAG 212
L++ S P+ G
Sbjct: 211 ELMTFGSKPYDG 222
>pdb|2JIU|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Complex With Aee788
pdb|2JIU|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Complex With Aee788
Length = 328
Score = 51.6 bits (122), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 36/132 (27%), Positives = 70/132 (53%), Gaps = 9/132 (6%)
Query: 88 LVLEMVPDGELQRLV-DIQDGIPEQDTRSYMKQILEALAFLHDHNITHLDLKPQNILLTK 146
L+++++P G L V + +D I Q ++ QI + + +L D + H DL +N+L+
Sbjct: 94 LIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRRLVHRDLAARNVLVKT 153
Query: 147 DNNIKLCDFGISRVVNDVVEVKEIIGTPDYVAPEVLSYEPI-----SLATDMWSVGVLAY 201
++K+ DFG+++++ E KE V + ++ E I + +D+WS GV +
Sbjct: 154 PQHVKITDFGLAKLLG--AEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVW 211
Query: 202 VLLSSHS-PFAG 212
L++ S P+ G
Sbjct: 212 ELMTFGSKPYDG 223
>pdb|3DKG|A Chain A, Sgx Clone 5698a109kfg1h1
Length = 317
Score = 51.6 bits (122), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 47/202 (23%), Positives = 89/202 (44%), Gaps = 16/202 (7%)
Query: 20 SRGKFASVRKCTHKITKVEYAAKFIRKRRRSMDQMQDI------LHEAAVLYLAQKSERI 73
RG F C + T ++ K I +S++++ DI L E ++ +
Sbjct: 40 GRGHFG----CVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVL 95
Query: 74 VGLHEIYETPHEMVLVLEMVPDGELQRLVDIQDGIPE-QDTRSYMKQILEALAFLHDHNI 132
L + ++VL + G+L+ + + P +D + Q+ + + FL
Sbjct: 96 SLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKFLASKKF 155
Query: 133 THLDLKPQNILLTKDNNIKLCDFGISRVV----NDVVEVKEIIGTP-DYVAPEVLSYEPI 187
H DL +N +L + +K+ DFG++R + D V K P ++A E L +
Sbjct: 156 VHRDLAARNCMLDEKFTVKVADFGLARDMLDKEFDSVHNKTGAKLPVKWMALESLQTQKF 215
Query: 188 SLATDMWSVGVLAYVLLSSHSP 209
+ +D+WS GVL + L++ +P
Sbjct: 216 TTKSDVWSFGVLLWELMTRGAP 237
>pdb|3ETA|A Chain A, Kinase Domain Of Insulin Receptor Complexed With A Pyrrolo
Pyridine Inhibitor
pdb|3ETA|B Chain B, Kinase Domain Of Insulin Receptor Complexed With A Pyrrolo
Pyridine Inhibitor
Length = 317
Score = 51.6 bits (122), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 47/222 (21%), Positives = 100/222 (45%), Gaps = 26/222 (11%)
Query: 50 SMDQMQDILHEAAVLYLAQKSERIVGLHEIYETPHEMVLVLEMVPDGELQRLV------- 102
S+ + + L+EA+V+ +V L + ++V+E++ G+L+ +
Sbjct: 59 SLRERIEFLNEASVMK-GFTCHHVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEA 117
Query: 103 DIQDGIPE---QDTRSYMKQILEALAFLHDHNITHLDLKPQNILLTKDNNIKLCDFGISR 159
+ G P Q+ +I + +A+L+ H DL +N ++ D +K+ DFG++R
Sbjct: 118 ENNPGRPPPTLQEMIQMAAEIADGMAYLNAKKFVHRDLAARNCMVAHDFTVKIGDFGMTR 177
Query: 160 VVNDVVEV-------KEIIGTPDYVAPEVLSYEPISLATDMWSVGVLAYVLLS-SHSPFA 211
D+ E K ++ ++APE L + ++DMWS GV+ + + S + P+
Sbjct: 178 ---DIYETDYYRKGGKGLLPV-RWMAPESLKDGVFTTSSDMWSFGVVLWEITSLAEQPYQ 233
Query: 212 GDNKQETFLNISQCNFSFHEDLFGHISSQAKDFIQSCLVTDP 253
G + ++ + + D + + D ++ C +P
Sbjct: 234 GLSNEQVLKFVMDGGYLDQPD---NCPERVTDLMRMCWQFNP 272
>pdb|3IKA|A Chain A, Crystal Structure Of Egfr 696-1022 T790m Mutant Covalently
Binding To Wz4002
pdb|3IKA|B Chain B, Crystal Structure Of Egfr 696-1022 T790m Mutant Covalently
Binding To Wz4002
Length = 331
Score = 51.6 bits (122), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 36/132 (27%), Positives = 70/132 (53%), Gaps = 9/132 (6%)
Query: 88 LVLEMVPDGELQRLV-DIQDGIPEQDTRSYMKQILEALAFLHDHNITHLDLKPQNILLTK 146
L+++++P G L V + +D I Q ++ QI + + +L D + H DL +N+L+
Sbjct: 97 LIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRRLVHRDLAARNVLVKT 156
Query: 147 DNNIKLCDFGISRVVNDVVEVKEIIGTPDYVAPEVLSYEPI-----SLATDMWSVGVLAY 201
++K+ DFG+++++ E KE V + ++ E I + +D+WS GV +
Sbjct: 157 PQHVKITDFGLAKLLG--AEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVW 214
Query: 202 VLLSSHS-PFAG 212
L++ S P+ G
Sbjct: 215 ELMTFGSKPYDG 226
>pdb|1IRK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Human Insulin Receptor
Length = 306
Score = 51.2 bits (121), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 47/222 (21%), Positives = 100/222 (45%), Gaps = 26/222 (11%)
Query: 50 SMDQMQDILHEAAVLYLAQKSERIVGLHEIYETPHEMVLVLEMVPDGELQRLV------- 102
S+ + + L+EA+V+ +V L + ++V+E++ G+L+ +
Sbjct: 60 SLRERIEFLNEASVMK-GFTCHHVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEA 118
Query: 103 DIQDGIPE---QDTRSYMKQILEALAFLHDHNITHLDLKPQNILLTKDNNIKLCDFGISR 159
+ G P Q+ +I + +A+L+ H DL +N ++ D +K+ DFG++R
Sbjct: 119 ENNPGRPPPTLQEMIQMAAEIADGMAYLNAKKFVHRDLAARNCMVAHDFTVKIGDFGMTR 178
Query: 160 VVNDVVEV-------KEIIGTPDYVAPEVLSYEPISLATDMWSVGVLAYVLLS-SHSPFA 211
D+ E K ++ ++APE L + ++DMWS GV+ + + S + P+
Sbjct: 179 ---DIYETDYYRKGGKGLLPV-RWMAPESLKDGVFTTSSDMWSFGVVLWEITSLAEQPYQ 234
Query: 212 GDNKQETFLNISQCNFSFHEDLFGHISSQAKDFIQSCLVTDP 253
G + ++ + + D + + D ++ C +P
Sbjct: 235 GLSNEQVLKFVMDGGYLDQPD---NCPERVTDLMRMCWQFNP 273
>pdb|2J5E|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An
Irreversible Inhibitor 13-Jab
Length = 327
Score = 51.2 bits (121), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 36/132 (27%), Positives = 69/132 (52%), Gaps = 9/132 (6%)
Query: 88 LVLEMVPDGELQRLV-DIQDGIPEQDTRSYMKQILEALAFLHDHNITHLDLKPQNILLTK 146
L+ +++P G L V + +D I Q ++ QI + + +L D + H DL +N+L+
Sbjct: 93 LITQLMPFGXLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRRLVHRDLAARNVLVKT 152
Query: 147 DNNIKLCDFGISRVVNDVVEVKEIIGTPDYVAPEVLSYEPI-----SLATDMWSVGVLAY 201
++K+ DFG+++++ E KE V + ++ E I + +D+WS GV +
Sbjct: 153 PQHVKITDFGLAKLLG--AEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVW 210
Query: 202 VLLSSHS-PFAG 212
L++ S P+ G
Sbjct: 211 ELMTFGSKPYDG 222
>pdb|2A19|B Chain B, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A19|C Chain C, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A1A|B Chain B, Pkr Kinase Domain-Eif2alpha Complex
Length = 284
Score = 50.8 bits (120), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 28/121 (23%), Positives = 61/121 (50%), Gaps = 2/121 (1%)
Query: 86 MVLVLEMVPDGELQRLVDIQDG--IPEQDTRSYMKQILEALAFLHDHNITHLDLKPQNIL 143
+ + +E G L++ ++ + G + + +QI + + ++H + + DLKP NI
Sbjct: 95 LFIQMEFCDKGTLEQWIEKRRGEKLDKVLALELFEQITKGVDYIHSKKLINRDLKPSNIF 154
Query: 144 LTKDNNIKLCDFGISRVVNDVVEVKEIIGTPDYVAPEVLSYEPISLATDMWSVGVLAYVL 203
L +K+ DFG+ + + + GT Y++PE +S + D++++G++ L
Sbjct: 155 LVDTKQVKIGDFGLVTSLKNDGKRXRSKGTLRYMSPEQISSQDYGKEVDLYALGLILAEL 214
Query: 204 L 204
L
Sbjct: 215 L 215
>pdb|1LUF|A Chain A, Crystal Structure Of The Musk Tyrosine Kinase: Insights
Into Receptor Autoregulation
Length = 343
Score = 50.8 bits (120), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 28/120 (23%), Positives = 57/120 (47%), Gaps = 18/120 (15%)
Query: 118 KQILEALAFLHDHNITHLDLKPQNILLTKDNNIKLCDFGISRVV----------NDVVEV 167
+Q+ +A+L + H DL +N L+ ++ +K+ DFG+SR + ND + +
Sbjct: 181 RQVAAGMAYLSERKFVHRDLATRNCLVGENMVVKIADFGLSRNIYSADYYKADGNDAIPI 240
Query: 168 KEIIGTPDYVAPEVLSYEPISLATDMWSVGVLAYVLLS-SHSPFAGDNKQETFLNISQCN 226
+ ++ PE + Y + +D+W+ GV+ + + S P+ G +E + N
Sbjct: 241 R-------WMPPESIFYNRYTTESDVWAYGVVLWEIFSYGLQPYYGMAHEEVIYYVRDGN 293
>pdb|3LQ8|A Chain A, Structure Of The Kinase Domain Of C-Met Bound To Xl880
(Gsk1
Length = 302
Score = 50.8 bits (120), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 46/202 (22%), Positives = 89/202 (44%), Gaps = 16/202 (7%)
Query: 20 SRGKFASVRKCTHKITKVEYAAKFIRKRRRSMDQMQDI------LHEAAVLYLAQKSERI 73
RG F C + T ++ K I +S++++ DI L E ++ +
Sbjct: 37 GRGHFG----CVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVL 92
Query: 74 VGLHEIYETPHEMVLVLEMVPDGELQRLVDIQDGIPE-QDTRSYMKQILEALAFLHDHNI 132
L + ++VL + G+L+ + + P +D + Q+ + + +L
Sbjct: 93 SLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYLASKKF 152
Query: 133 THLDLKPQNILLTKDNNIKLCDFGISRVVND----VVEVKEIIGTP-DYVAPEVLSYEPI 187
H DL +N +L + +K+ DFG++R + D V K P ++A E L +
Sbjct: 153 VHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQTQKF 212
Query: 188 SLATDMWSVGVLAYVLLSSHSP 209
+ +D+WS GVL + L++ +P
Sbjct: 213 TTKSDVWSFGVLLWELMTRGAP 234
>pdb|2WD1|A Chain A, Human C-Met Kinase In Complex With Azaindole Inhibitor
Length = 292
Score = 50.4 bits (119), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 46/202 (22%), Positives = 89/202 (44%), Gaps = 16/202 (7%)
Query: 20 SRGKFASVRKCTHKITKVEYAAKFIRKRRRSMDQMQDI------LHEAAVLYLAQKSERI 73
RG F C + T ++ K I +S++++ DI L E ++ +
Sbjct: 31 GRGHFG----CVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVL 86
Query: 74 VGLHEIYETPHEMVLVLEMVPDGELQRLVDIQDGIPE-QDTRSYMKQILEALAFLHDHNI 132
L + ++VL + G+L+ + + P +D + Q+ + + +L
Sbjct: 87 SLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYLASKKF 146
Query: 133 THLDLKPQNILLTKDNNIKLCDFGISRVVND----VVEVKEIIGTP-DYVAPEVLSYEPI 187
H DL +N +L + +K+ DFG++R + D V K P ++A E L +
Sbjct: 147 VHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQTQKF 206
Query: 188 SLATDMWSVGVLAYVLLSSHSP 209
+ +D+WS GVL + L++ +P
Sbjct: 207 TTKSDVWSFGVLLWELMTRGAP 228
>pdb|2G15|A Chain A, Structural Characterization Of Autoinhibited C-Met Kinase
pdb|3RHK|A Chain A, Crystal Structure Of The Catalytic Domain Of C-Met Kinase
In Complex With Arq 197
pdb|3RHK|B Chain B, Crystal Structure Of The Catalytic Domain Of C-Met Kinase
In Complex With Arq 197
Length = 318
Score = 50.4 bits (119), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 46/202 (22%), Positives = 89/202 (44%), Gaps = 16/202 (7%)
Query: 20 SRGKFASVRKCTHKITKVEYAAKFIRKRRRSMDQMQDI------LHEAAVLYLAQKSERI 73
RG F C + T ++ K I +S++++ DI L E ++ +
Sbjct: 57 GRGHFG----CVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVL 112
Query: 74 VGLHEIYETPHEMVLVLEMVPDGELQRLVDIQDGIPE-QDTRSYMKQILEALAFLHDHNI 132
L + ++VL + G+L+ + + P +D + Q+ + + +L
Sbjct: 113 SLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYLASKKF 172
Query: 133 THLDLKPQNILLTKDNNIKLCDFGISRVVND----VVEVKEIIGTP-DYVAPEVLSYEPI 187
H DL +N +L + +K+ DFG++R + D V K P ++A E L +
Sbjct: 173 VHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQTQKF 232
Query: 188 SLATDMWSVGVLAYVLLSSHSP 209
+ +D+WS GVL + L++ +P
Sbjct: 233 TTKSDVWSFGVLLWELMTRGAP 254
>pdb|3LZB|A Chain A, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|B Chain B, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|C Chain C, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|D Chain D, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|E Chain E, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|F Chain F, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|G Chain G, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|H Chain H, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
Length = 327
Score = 50.4 bits (119), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 36/132 (27%), Positives = 69/132 (52%), Gaps = 9/132 (6%)
Query: 88 LVLEMVPDGELQRLV-DIQDGIPEQDTRSYMKQILEALAFLHDHNITHLDLKPQNILLTK 146
L+ +++P G L V + +D I Q ++ QI + + +L D + H DL +N+L+
Sbjct: 93 LITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRRLVHRDLAARNVLVKT 152
Query: 147 DNNIKLCDFGISRVVNDVVEVKEIIGTPDYVAPEVLSYEPI-----SLATDMWSVGVLAY 201
++K+ DFG+++++ E KE V + ++ E I + +D+WS GV +
Sbjct: 153 PQHVKITDFGLAKLLG--AEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVW 210
Query: 202 VLLSSHS-PFAG 212
L++ S P+ G
Sbjct: 211 ELMTFGSKPYDG 222
>pdb|3BEL|A Chain A, X-Ray Structure Of Egfr In Complex With Oxime Inhibitor
pdb|2RGP|A Chain A, Structure Of Egfr In Complex With Hydrazone, A Potent Dual
Inhibitor
Length = 315
Score = 50.4 bits (119), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 36/132 (27%), Positives = 69/132 (52%), Gaps = 9/132 (6%)
Query: 88 LVLEMVPDGELQRLV-DIQDGIPEQDTRSYMKQILEALAFLHDHNITHLDLKPQNILLTK 146
L+ +++P G L V + +D I Q ++ QI + + +L D + H DL +N+L+
Sbjct: 87 LITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRRLVHRDLAARNVLVKT 146
Query: 147 DNNIKLCDFGISRVVNDVVEVKEIIGTPDYVAPEVLSYEPI-----SLATDMWSVGVLAY 201
++K+ DFG+++++ E KE V + ++ E I + +D+WS GV +
Sbjct: 147 PQHVKITDFGLAKLLG--AEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVW 204
Query: 202 VLLSSHS-PFAG 212
L++ S P+ G
Sbjct: 205 ELMTFGSKPYDG 216
>pdb|4HJO|A Chain A, Crystal Structure Of The Inactive Egfr Tyrosine Kinase
Domain With Erlotinib
Length = 337
Score = 50.4 bits (119), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 36/132 (27%), Positives = 69/132 (52%), Gaps = 9/132 (6%)
Query: 88 LVLEMVPDGELQRLV-DIQDGIPEQDTRSYMKQILEALAFLHDHNITHLDLKPQNILLTK 146
L+ +++P G L V + +D I Q ++ QI + + +L D + H DL +N+L+
Sbjct: 103 LITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRRLVHRDLAARNVLVKT 162
Query: 147 DNNIKLCDFGISRVVNDVVEVKEIIGTPDYVAPEVLSYEPI-----SLATDMWSVGVLAY 201
++K+ DFG+++++ E KE V + ++ E I + +D+WS GV +
Sbjct: 163 PQHVKITDFGLAKLLG--AEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVW 220
Query: 202 VLLSSHS-PFAG 212
L++ S P+ G
Sbjct: 221 ELMTFGSKPYDG 232
>pdb|2GS7|A Chain A, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|2GS7|B Chain B, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|A Chain A, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|B Chain B, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|C Chain C, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|D Chain D, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
Length = 330
Score = 50.4 bits (119), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 36/132 (27%), Positives = 69/132 (52%), Gaps = 9/132 (6%)
Query: 88 LVLEMVPDGELQRLV-DIQDGIPEQDTRSYMKQILEALAFLHDHNITHLDLKPQNILLTK 146
L+ +++P G L V + +D I Q ++ QI + + +L D + H DL +N+L+
Sbjct: 96 LITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRRLVHRDLAARNVLVKT 155
Query: 147 DNNIKLCDFGISRVVNDVVEVKEIIGTPDYVAPEVLSYEPI-----SLATDMWSVGVLAY 201
++K+ DFG+++++ E KE V + ++ E I + +D+WS GV +
Sbjct: 156 PQHVKITDFGLAKLLG--AEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVW 213
Query: 202 VLLSSHS-PFAG 212
L++ S P+ G
Sbjct: 214 ELMTFGSKPYDG 225
>pdb|1XKK|A Chain A, Egfr Kinase Domain Complexed With A Quinazoline Inhibitor-
Gw572016
Length = 352
Score = 50.4 bits (119), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 36/132 (27%), Positives = 69/132 (52%), Gaps = 9/132 (6%)
Query: 88 LVLEMVPDGELQRLV-DIQDGIPEQDTRSYMKQILEALAFLHDHNITHLDLKPQNILLTK 146
L+ +++P G L V + +D I Q ++ QI + + +L D + H DL +N+L+
Sbjct: 118 LITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRRLVHRDLAARNVLVKT 177
Query: 147 DNNIKLCDFGISRVVNDVVEVKEIIGTPDYVAPEVLSYEPI-----SLATDMWSVGVLAY 201
++K+ DFG+++++ E KE V + ++ E I + +D+WS GV +
Sbjct: 178 PQHVKITDFGLAKLLG--AEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVW 235
Query: 202 VLLSSHS-PFAG 212
L++ S P+ G
Sbjct: 236 ELMTFGSKPYDG 247
>pdb|2EB2|A Chain A, Crystal Structure Of Mutated Egfr Kinase Domain (G719s)
Length = 334
Score = 50.4 bits (119), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 36/132 (27%), Positives = 69/132 (52%), Gaps = 9/132 (6%)
Query: 88 LVLEMVPDGELQRLV-DIQDGIPEQDTRSYMKQILEALAFLHDHNITHLDLKPQNILLTK 146
L+ +++P G L V + +D I Q ++ QI + + +L D + H DL +N+L+
Sbjct: 100 LITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRRLVHRDLAARNVLVKT 159
Query: 147 DNNIKLCDFGISRVVNDVVEVKEIIGTPDYVAPEVLSYEPI-----SLATDMWSVGVLAY 201
++K+ DFG+++++ E KE V + ++ E I + +D+WS GV +
Sbjct: 160 PQHVKITDFGLAKLLG--AEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVW 217
Query: 202 VLLSSHS-PFAG 212
L++ S P+ G
Sbjct: 218 ELMTFGSKPYDG 229
>pdb|2BUJ|A Chain A, Crystal Structure Of The Human Serine-Threonine Kinase 16
In Complex With Staurosporine
pdb|2BUJ|B Chain B, Crystal Structure Of The Human Serine-Threonine Kinase 16
In Complex With Staurosporine
Length = 317
Score = 50.4 bits (119), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 41/144 (28%), Positives = 59/144 (40%), Gaps = 17/144 (11%)
Query: 84 HEMVLVLEMVPDG----ELQRLVDIQDGIPEQDTRSYMKQILEALAFLHDHNITHLDLKP 139
HE L+L G E++RL D + + E + I L +H H DLKP
Sbjct: 103 HEAWLLLPFFKRGTLWNEIERLKDKGNFLTEDQILWLLLGICRGLEAIHAKGYAHRDLKP 162
Query: 140 QNILLTKDNNIKLCDFGI----------SRVVNDVVEVKEIIGTPDYVAPEVLSYEP--- 186
NILL + L D G SR + + T Y APE+ S +
Sbjct: 163 TNILLGDEGQPVLMDLGSMNQACIHVEGSRQALTLQDWAAQRCTISYRAPELFSVQSHCV 222
Query: 187 ISLATDMWSVGVLAYVLLSSHSPF 210
I TD+WS+G + Y ++ P+
Sbjct: 223 IDERTDVWSLGCVLYAMMFGEGPY 246
>pdb|4G5J|A Chain A, Crystal Structure Of Egfr Kinase In Complex With Bibw2992
Length = 330
Score = 50.4 bits (119), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 36/132 (27%), Positives = 69/132 (52%), Gaps = 9/132 (6%)
Query: 88 LVLEMVPDGELQRLV-DIQDGIPEQDTRSYMKQILEALAFLHDHNITHLDLKPQNILLTK 146
L+ +++P G L V + +D I Q ++ QI + + +L D + H DL +N+L+
Sbjct: 96 LITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRRLVHRDLAARNVLVKT 155
Query: 147 DNNIKLCDFGISRVVNDVVEVKEIIGTPDYVAPEVLSYEPI-----SLATDMWSVGVLAY 201
++K+ DFG+++++ E KE V + ++ E I + +D+WS GV +
Sbjct: 156 PQHVKITDFGLAKLLG--AEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVW 213
Query: 202 VLLSSHS-PFAG 212
L++ S P+ G
Sbjct: 214 ELMTFGSKPYDG 225
>pdb|3VJO|A Chain A, Crystal Structure Of The Wild-Type Egfr Kinase Domain In
Complex With Amppnp
Length = 334
Score = 50.4 bits (119), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 36/132 (27%), Positives = 69/132 (52%), Gaps = 9/132 (6%)
Query: 88 LVLEMVPDGELQRLV-DIQDGIPEQDTRSYMKQILEALAFLHDHNITHLDLKPQNILLTK 146
L+ +++P G L V + +D I Q ++ QI + + +L D + H DL +N+L+
Sbjct: 100 LITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRRLVHRDLAARNVLVKT 159
Query: 147 DNNIKLCDFGISRVVNDVVEVKEIIGTPDYVAPEVLSYEPI-----SLATDMWSVGVLAY 201
++K+ DFG+++++ E KE V + ++ E I + +D+WS GV +
Sbjct: 160 PQHVKITDFGLAKLLG--AEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVW 217
Query: 202 VLLSSHS-PFAG 212
L++ S P+ G
Sbjct: 218 ELMTFGSKPYDG 229
>pdb|4I23|A Chain A, Crystal Structure Of The Wild-type Egfr Kinase Domain In
Complex With Dacomitinib (soaked)
Length = 329
Score = 50.4 bits (119), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 36/132 (27%), Positives = 69/132 (52%), Gaps = 9/132 (6%)
Query: 88 LVLEMVPDGELQRLV-DIQDGIPEQDTRSYMKQILEALAFLHDHNITHLDLKPQNILLTK 146
L+ +++P G L V + +D I Q ++ QI + + +L D + H DL +N+L+
Sbjct: 95 LITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRRLVHRDLAARNVLVKT 154
Query: 147 DNNIKLCDFGISRVVNDVVEVKEIIGTPDYVAPEVLSYEPI-----SLATDMWSVGVLAY 201
++K+ DFG+++++ E KE V + ++ E I + +D+WS GV +
Sbjct: 155 PQHVKITDFGLAKLLG--AEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVW 212
Query: 202 VLLSSHS-PFAG 212
L++ S P+ G
Sbjct: 213 ELMTFGSKPYDG 224
>pdb|1M14|A Chain A, Tyrosine Kinase Domain From Epidermal Growth Factor
Receptor
pdb|1M17|A Chain A, Epidermal Growth Factor Receptor Tyrosine Kinase Domain
With 4-Anilinoquinazoline Inhibitor Erlotinib
Length = 333
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 36/132 (27%), Positives = 69/132 (52%), Gaps = 9/132 (6%)
Query: 88 LVLEMVPDGELQRLV-DIQDGIPEQDTRSYMKQILEALAFLHDHNITHLDLKPQNILLTK 146
L+ +++P G L V + +D I Q ++ QI + + +L D + H DL +N+L+
Sbjct: 99 LITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRRLVHRDLAARNVLVKT 158
Query: 147 DNNIKLCDFGISRVVNDVVEVKEIIGTPDYVAPEVLSYEPI-----SLATDMWSVGVLAY 201
++K+ DFG+++++ E KE V + ++ E I + +D+WS GV +
Sbjct: 159 PQHVKITDFGLAKLLG--AEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVW 216
Query: 202 VLLSSHS-PFAG 212
L++ S P+ G
Sbjct: 217 ELMTFGSKPYDG 228
>pdb|3Q6W|A Chain A, Structure Of Dually-phosphorylated Met Receptor Kinase In
Complex With An Mk-2461 Analog With Specificity For The
Activated Receptor
pdb|3R7O|A Chain A, Structure Of Dually Phosphorylated C-Met Receptor Kinase
In Complex With An Mk-2461 Analog
Length = 307
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 46/202 (22%), Positives = 89/202 (44%), Gaps = 16/202 (7%)
Query: 20 SRGKFASVRKCTHKITKVEYAAKFIRKRRRSMDQMQDI------LHEAAVLYLAQKSERI 73
RG F C + T ++ K I +S++++ DI L E ++ +
Sbjct: 38 GRGHFG----CVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVL 93
Query: 74 VGLHEIYETPHEMVLVLEMVPDGELQRLVDIQDGIPE-QDTRSYMKQILEALAFLHDHNI 132
L + ++VL + G+L+ + + P +D + Q+ + + +L
Sbjct: 94 SLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYLASKKF 153
Query: 133 THLDLKPQNILLTKDNNIKLCDFGISRVVND----VVEVKEIIGTP-DYVAPEVLSYEPI 187
H DL +N +L + +K+ DFG++R + D V K P ++A E L +
Sbjct: 154 VHRDLAARNCMLDEKFTVKVADFGLARDMYDKEXXSVHNKTGAKLPVKWMALESLQTQKF 213
Query: 188 SLATDMWSVGVLAYVLLSSHSP 209
+ +D+WS GVL + L++ +P
Sbjct: 214 TTKSDVWSFGVLLWELMTRGAP 235
>pdb|2RFN|A Chain A, X-ray Structure Of C-met With Inhibitor.
pdb|2RFN|B Chain B, X-ray Structure Of C-met With Inhibitor.
pdb|2RFS|A Chain A, X-Ray Structure Of Su11274 Bound To C-Met
pdb|3CCN|A Chain A, X-Ray Structure Of C-Met With Triazolopyridazine
Inhibitor.
pdb|3CD8|A Chain A, X-Ray Structure Of C-Met With Triazolopyridazine
Inhibitor.
pdb|3EFJ|A Chain A, Structure Of C-Met With Pyrimidone Inhibitor 7
pdb|3EFJ|B Chain B, Structure Of C-Met With Pyrimidone Inhibitor 7
pdb|3EFK|A Chain A, Structure Of C-Met With Pyrimidone Inhibitor 50
pdb|3EFK|B Chain B, Structure Of C-Met With Pyrimidone Inhibitor 50
Length = 310
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 46/202 (22%), Positives = 89/202 (44%), Gaps = 16/202 (7%)
Query: 20 SRGKFASVRKCTHKITKVEYAAKFIRKRRRSMDQMQDI------LHEAAVLYLAQKSERI 73
RG F C + T ++ K I +S++++ DI L E ++ +
Sbjct: 39 GRGHFG----CVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVL 94
Query: 74 VGLHEIYETPHEMVLVLEMVPDGELQRLVDIQDGIPE-QDTRSYMKQILEALAFLHDHNI 132
L + ++VL + G+L+ + + P +D + Q+ + + +L
Sbjct: 95 SLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYLASKKF 154
Query: 133 THLDLKPQNILLTKDNNIKLCDFGISRVVND----VVEVKEIIGTP-DYVAPEVLSYEPI 187
H DL +N +L + +K+ DFG++R + D V K P ++A E L +
Sbjct: 155 VHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQTQKF 214
Query: 188 SLATDMWSVGVLAYVLLSSHSP 209
+ +D+WS GVL + L++ +P
Sbjct: 215 TTKSDVWSFGVLLWELMTRGAP 236
>pdb|3Q6U|A Chain A, Structure Of The Apo Met Receptor Kinase In The
Dually-Phosphorylated, Activated State
Length = 308
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 46/202 (22%), Positives = 89/202 (44%), Gaps = 16/202 (7%)
Query: 20 SRGKFASVRKCTHKITKVEYAAKFIRKRRRSMDQMQDI------LHEAAVLYLAQKSERI 73
RG F C + T ++ K I +S++++ DI L E ++ +
Sbjct: 39 GRGHFG----CVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVL 94
Query: 74 VGLHEIYETPHEMVLVLEMVPDGELQRLVDIQDGIPE-QDTRSYMKQILEALAFLHDHNI 132
L + ++VL + G+L+ + + P +D + Q+ + + +L
Sbjct: 95 SLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYLASKKF 154
Query: 133 THLDLKPQNILLTKDNNIKLCDFGISRVVND----VVEVKEIIGTP-DYVAPEVLSYEPI 187
H DL +N +L + +K+ DFG++R + D V K P ++A E L +
Sbjct: 155 VHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQTQKF 214
Query: 188 SLATDMWSVGVLAYVLLSSHSP 209
+ +D+WS GVL + L++ +P
Sbjct: 215 TTKSDVWSFGVLLWELMTRGAP 236
>pdb|2WGJ|A Chain A, X-Ray Structure Of Pf-02341066 Bound To The Kinase Domain
Of C-Met
pdb|2WKM|A Chain A, X-Ray Structure Of Pha-00665752 Bound To The Kinase Domain
Of C-Met
pdb|3ZXZ|A Chain A, X-Ray Structure Of Pf-04217903 Bound To The Kinase Domain
Of C-Met
pdb|3ZZE|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
N'-
((3z)-4-Chloro-7-Methyl-2-Oxo-1,2-Dihydro-3h-Indol-3-
Ylidene)-2-(4-Hydroxyphenyl)propanohydrazide
pdb|4AOI|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
4-( 3-((1h-
Pyrrolo(2,3-B)pyridin-3-Yl)methyl)-(1,2,4)triazolo(
4,3-B)(1,2,4) Triazin-6-Yl)benzonitrile
pdb|4AP7|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
4-( (6-(4-
Fluorophenyl)-(1,2,4)triazolo(4,3-B)(1,2,
4)triazin-3-Yl)methyl) Phenol
Length = 306
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 46/202 (22%), Positives = 89/202 (44%), Gaps = 16/202 (7%)
Query: 20 SRGKFASVRKCTHKITKVEYAAKFIRKRRRSMDQMQDI------LHEAAVLYLAQKSERI 73
RG F C + T ++ K I +S++++ DI L E ++ +
Sbjct: 36 GRGHFG----CVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVL 91
Query: 74 VGLHEIYETPHEMVLVLEMVPDGELQRLVDIQDGIPE-QDTRSYMKQILEALAFLHDHNI 132
L + ++VL + G+L+ + + P +D + Q+ + + +L
Sbjct: 92 SLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYLASKKF 151
Query: 133 THLDLKPQNILLTKDNNIKLCDFGISRVVND----VVEVKEIIGTP-DYVAPEVLSYEPI 187
H DL +N +L + +K+ DFG++R + D V K P ++A E L +
Sbjct: 152 VHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQTQKF 211
Query: 188 SLATDMWSVGVLAYVLLSSHSP 209
+ +D+WS GVL + L++ +P
Sbjct: 212 TTKSDVWSFGVLLWELMTRGAP 233
>pdb|3I5N|A Chain A, Crystal Structure Of C-Met With Triazolopyridazine
Inhibitor 13
pdb|3U6H|A Chain A, Crystal Structure Of C-Met In Complex With Pyrazolone
Inhibitor 26
pdb|3U6I|A Chain A, Crystal Structure Of C-Met In Complex With Pyrazolone
Inhibitor 58a
pdb|4DEG|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridazine Inhibitor 2
pdb|4DEH|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridinone Inhibitor 3
pdb|4DEI|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridinone Inhibitor 24
Length = 309
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 46/202 (22%), Positives = 89/202 (44%), Gaps = 16/202 (7%)
Query: 20 SRGKFASVRKCTHKITKVEYAAKFIRKRRRSMDQMQDI------LHEAAVLYLAQKSERI 73
RG F C + T ++ K I +S++++ DI L E ++ +
Sbjct: 38 GRGHFG----CVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVL 93
Query: 74 VGLHEIYETPHEMVLVLEMVPDGELQRLVDIQDGIPE-QDTRSYMKQILEALAFLHDHNI 132
L + ++VL + G+L+ + + P +D + Q+ + + +L
Sbjct: 94 SLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYLASKKF 153
Query: 133 THLDLKPQNILLTKDNNIKLCDFGISRVVND----VVEVKEIIGTP-DYVAPEVLSYEPI 187
H DL +N +L + +K+ DFG++R + D V K P ++A E L +
Sbjct: 154 VHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQTQKF 213
Query: 188 SLATDMWSVGVLAYVLLSSHSP 209
+ +D+WS GVL + L++ +P
Sbjct: 214 TTKSDVWSFGVLLWELMTRGAP 235
>pdb|2J5F|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An
Irreversible Inhibitor 34-Jab
pdb|2ITW|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Afn941
pdb|2ITX|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Amp- Pnp
pdb|2ITY|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Iressa
pdb|2J6M|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Aee788
pdb|3POZ|A Chain A, Egfr Kinase Domain Complexed With Tak-285
Length = 327
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 36/132 (27%), Positives = 69/132 (52%), Gaps = 9/132 (6%)
Query: 88 LVLEMVPDGELQRLV-DIQDGIPEQDTRSYMKQILEALAFLHDHNITHLDLKPQNILLTK 146
L+ +++P G L V + +D I Q ++ QI + + +L D + H DL +N+L+
Sbjct: 93 LITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRRLVHRDLAARNVLVKT 152
Query: 147 DNNIKLCDFGISRVVNDVVEVKEIIGTPDYVAPEVLSYEPI-----SLATDMWSVGVLAY 201
++K+ DFG+++++ E KE V + ++ E I + +D+WS GV +
Sbjct: 153 PQHVKITDFGLAKLLG--AEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVW 210
Query: 202 VLLSSHS-PFAG 212
L++ S P+ G
Sbjct: 211 ELMTFGSKPYDG 222
>pdb|3V5Q|A Chain A, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
pdb|3V5Q|B Chain B, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
Length = 297
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 42/170 (24%), Positives = 73/170 (42%), Gaps = 20/170 (11%)
Query: 55 QDILHEAAVLYLAQKSERIVGLHEIYETPHEMVLVLEMVPDGELQRLVD--------IQD 106
+D EA +L Q E IV + + +++V E + G+L + + + D
Sbjct: 62 KDFQREAELLTNLQ-HEHIVKFYGVCGDGDPLIMVFEYMKHGDLNKFLRAHGPDAMILVD 120
Query: 107 GIPEQDTRSY--------MKQILEALAFLHDHNITHLDLKPQNILLTKDNNIKLCDFGIS 158
G P Q QI + +L + H DL +N L+ + +K+ DFG+S
Sbjct: 121 GQPRQAKGELGLSQMLHIASQIASGMVYLASQHFVHRDLATRNCLVGANLLVKIGDFGMS 180
Query: 159 RVV--NDVVEVKEIIGTP-DYVAPEVLSYEPISLATDMWSVGVLAYVLLS 205
R V D V P ++ PE + Y + +D+WS GV+ + + +
Sbjct: 181 RDVYSTDYYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSFGVILWEIFT 230
>pdb|3F66|A Chain A, Human C-Met Kinase In Complex With Quinoxaline Inhibitor
pdb|3F66|B Chain B, Human C-Met Kinase In Complex With Quinoxaline Inhibitor
Length = 298
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 46/202 (22%), Positives = 89/202 (44%), Gaps = 16/202 (7%)
Query: 20 SRGKFASVRKCTHKITKVEYAAKFIRKRRRSMDQMQDI------LHEAAVLYLAQKSERI 73
RG F C + T ++ K I +S++++ DI L E ++ +
Sbjct: 34 GRGHFG----CVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVL 89
Query: 74 VGLHEIYETPHEMVLVLEMVPDGELQRLVDIQDGIPE-QDTRSYMKQILEALAFLHDHNI 132
L + ++VL + G+L+ + + P +D + Q+ + + +L
Sbjct: 90 SLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYLASKKF 149
Query: 133 THLDLKPQNILLTKDNNIKLCDFGISRVVND----VVEVKEIIGTP-DYVAPEVLSYEPI 187
H DL +N +L + +K+ DFG++R + D V K P ++A E L +
Sbjct: 150 VHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQTQKF 209
Query: 188 SLATDMWSVGVLAYVLLSSHSP 209
+ +D+WS GVL + L++ +P
Sbjct: 210 TTKSDVWSFGVLLWELMTRGAP 231
>pdb|2GS2|A Chain A, Crystal Structure Of The Active Egfr Kinase Domain
pdb|2GS6|A Chain A, Crystal Structure Of The Active Egfr Kinase Domain In
Complex With An Atp Analog-Peptide Conjugate
pdb|2RF9|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RF9|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|3W2S|A Chain A, Egfr Kinase Domain With Compound4
Length = 330
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 36/132 (27%), Positives = 69/132 (52%), Gaps = 9/132 (6%)
Query: 88 LVLEMVPDGELQRLV-DIQDGIPEQDTRSYMKQILEALAFLHDHNITHLDLKPQNILLTK 146
L+ +++P G L V + +D I Q ++ QI + + +L D + H DL +N+L+
Sbjct: 96 LITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRRLVHRDLAARNVLVKT 155
Query: 147 DNNIKLCDFGISRVVNDVVEVKEIIGTPDYVAPEVLSYEPI-----SLATDMWSVGVLAY 201
++K+ DFG+++++ E KE V + ++ E I + +D+WS GV +
Sbjct: 156 PQHVKITDFGLAKLLG--AEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVW 213
Query: 202 VLLSSHS-PFAG 212
L++ S P+ G
Sbjct: 214 ELMTFGSKPYDG 225
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.323 0.138 0.406
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 7,318,645
Number of Sequences: 62578
Number of extensions: 286458
Number of successful extensions: 3023
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 1069
Number of HSP's successfully gapped in prelim test: 53
Number of HSP's that attempted gapping in prelim test: 740
Number of HSP's gapped (non-prelim): 1153
length of query: 253
length of database: 14,973,337
effective HSP length: 97
effective length of query: 156
effective length of database: 8,903,271
effective search space: 1388910276
effective search space used: 1388910276
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 50 (23.9 bits)