BLASTP 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.


Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= psy12713
         (551 letters)

Database: nr 
           23,463,169 sequences; 8,064,228,071 total letters

Searching..................................................done



>gi|291240441|ref|XP_002740127.1| PREDICTED: super sex combs-like [Saccoglossus kowalevskii]
          Length = 575

 Score =  268 bits (686), Expect = 4e-69,   Method: Compositional matrix adjust.
 Identities = 145/373 (38%), Positives = 226/373 (60%), Gaps = 6/373 (1%)

Query: 4   DRGAQHAKEEISKRSFFKPSKQFIKTYLKSFPNDPILQP--DGLSNGVELTNGDTNESHE 61
           D G + AK++ S R+   PSKQFIK+Y  SF  D   QP   G ++  +    ++ E+ +
Sbjct: 202 DMGKEKAKKKYSTRTPSMPSKQFIKSYFSSFAQDITTQPLEKGDNDDEDKDKDESVETPK 261

Query: 62  LDLLSKAKRAFEHEDYLTAIRHCTEEIESTSSNHTKALARLLRATVYIFTSQSTKAIEDL 121
                KA+  F++EDY   I  CT+EI+S       A+  L+RAT Y+   Q+      L
Sbjct: 262 SSGYRKAREYFDNEDYDKIIDECTKEIDSEGPCMAHAV--LMRATFYMLKGQANLGKPGL 319

Query: 122 TQLVEDTSVDPKIKVNAHIKRAVVHLHAASDFTKAFADLDEAEKVDPNVADSYYQRGQIY 181
             +++  S D  ++VNA IKR  +++   +  T+A  D  +A ++DP  AD Y+ RGQ+ 
Sbjct: 320 DDVIDMESADKMLRVNALIKRGSMYMQQGNS-TEALNDFAQAVRIDPENADIYHHRGQLN 378

Query: 182 CLFGQYEEALRNLDKTIALNPNFHVARAQRHFVVHKM-IVPGDRERVEQSLKEFRNFVDT 240
            L  + +EAL++ +K ++LNP F +A+AQ  + +++         +++ ++  F   +  
Sbjct: 379 VLLDRVDEALKDFEKCVSLNPGFALAQAQHCYAMYRAAFAQRSPMQLQAAMNAFEKVIKD 438

Query: 241 HSNVVEACTLFAQVLVDQEDFDGAEEYFNRSIRVDPENASLYVHRAMLMLQARGNVDEAI 300
             N  E   LFAQ L DQ+ +  A+E F ++++++PEN + YVHR +LMLQ + +VD A+
Sbjct: 439 FPNCAEGYALFAQALNDQQQYSQADEMFLKAMKLEPENPTTYVHRGLLMLQWKQDVDTAV 498

Query: 301 KLIEKAISIDKSCMFAYETLGTIEVQRGRLEEAVKCFNKALPLARDEAELSHIYSLRDAA 360
           KL++K++ ID  C FAYETLGTIEVQRG LE A++ F KA+ LAR E E++H+YSL DAA
Sbjct: 499 KLMKKSLEIDDKCDFAYETLGTIEVQRGNLEHAIQLFEKAIDLARTEMEMAHLYSLLDAA 558

Query: 361 IAQMKVCERYNIK 373
           IAQ +V   YNI+
Sbjct: 559 IAQTRVATMYNIR 571



 Score = 55.8 bits (133), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 24/61 (39%), Positives = 40/61 (65%)

Query: 466 TKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQRHF 525
           T+A  D  +A ++DP  AD Y+ RGQ+  L  + +EAL++ +K ++LNP F +A+AQ  +
Sbjct: 351 TEALNDFAQAVRIDPENADIYHHRGQLNVLLDRVDEALKDFEKCVSLNPGFALAQAQHCY 410

Query: 526 V 526
            
Sbjct: 411 A 411


>gi|270005628|gb|EFA02076.1| hypothetical protein TcasGA2_TC007711 [Tribolium castaneum]
          Length = 557

 Score =  266 bits (681), Expect = 2e-68,   Method: Compositional matrix adjust.
 Identities = 158/371 (42%), Positives = 224/371 (60%), Gaps = 15/371 (4%)

Query: 6   GAQHAKEEISKRSFFKPSKQFIKTYLKSFPNDPILQPDGLSNGVELTN-GDTNESHELDL 64
           G +HA+E +  R    PSK FIKTY  SF  D + Q        +LT  GD     EL  
Sbjct: 190 GKKHAQEAMLNRKPIIPSKTFIKTYFSSFSEDVVYQ--------KLTEVGDPLGQGELSG 241

Query: 65  LSKAKRAFEHEDYLTAIRHCTEEIESTSSNHT-KALARLLRATVYIFTSQSTKAIEDLTQ 123
             KAK AF  E Y   I  CTEEI S+ S    K  A  LRA+ Y  T    KA+EDLT 
Sbjct: 242 FLKAKLAFATEKYEEIIPSCTEEINSSESESPFKIEALSLRASFYFLTGNLDKALEDLTT 301

Query: 124 LVEDTSVDPKIKVNAHIKRAVVHLHAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCL 183
           ++ +T  D KIKVN+ IKRA +++      T+   D D+A +V P ++D ++ RGQ+  L
Sbjct: 302 II-NTDCDVKIKVNSLIKRASIYMQN-EKLTECLEDFDKAAEVGPEISDVFHHRGQVKLL 359

Query: 184 FGQYEEALRNLDKTIALNPNFHVARAQRHF--VVHKMIVPGDRERVEQSLKEFRNFVDTH 241
             +  EA+ +  K + LNPNF VA  Q+ +    H M V  D + + QSL  F+  ++  
Sbjct: 360 MEKTNEAILDFQKAVDLNPNFSVAFVQKCYSDYRHAMQVQ-DVQLLMQSLANFKKGIEKF 418

Query: 242 SNVVEACTLFAQVLVDQEDFDGAEEYFNRSIRVDPENASLYVHRAMLMLQARGNVDEAIK 301
              VE   L+AQVL +++D++ A++ + +++ +D ENAS+YVHR +LMLQ +G +++A++
Sbjct: 419 PTCVETYVLYAQVLTEKQDYEEADKLYGKALEIDSENASIYVHRGLLMLQWKGEIEQAVE 478

Query: 302 LIEKAISIDKSCMFAYETLGTIEVQRGRLEEAVKCFNKALPLARDEAELSHIYSLRDAAI 361
           L+++ I ID  C FAYETLGT+EVQRG L  A+  FNKA+ LAR E EL+H++SLRDAA 
Sbjct: 479 LMKEGIKIDDKCEFAYETLGTVEVQRGNLVVAIDLFNKAIALARSEMELTHLFSLRDAAT 538

Query: 362 AQMKVCERYNI 372
           +Q+KV  R  I
Sbjct: 539 SQLKVTTRLGI 549



 Score = 52.0 bits (123), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 22/61 (36%), Positives = 36/61 (59%)

Query: 465 FTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQRH 524
            T+   D D+A +V P ++D ++ RGQ+  L  +  EA+ +  K + LNPNF VA  Q+ 
Sbjct: 329 LTECLEDFDKAAEVGPEISDVFHHRGQVKLLMEKTNEAILDFQKAVDLNPNFSVAFVQKC 388

Query: 525 F 525
           +
Sbjct: 389 Y 389


>gi|189236082|ref|XP_972621.2| PREDICTED: similar to rCG36659 [Tribolium castaneum]
          Length = 1440

 Score =  264 bits (674), Expect = 9e-68,   Method: Compositional matrix adjust.
 Identities = 158/371 (42%), Positives = 224/371 (60%), Gaps = 15/371 (4%)

Query: 6   GAQHAKEEISKRSFFKPSKQFIKTYLKSFPNDPILQPDGLSNGVELTN-GDTNESHELDL 64
           G +HA+E +  R    PSK FIKTY  SF  D + Q        +LT  GD     EL  
Sbjct: 247 GKKHAQEAMLNRKPIIPSKTFIKTYFSSFSEDVVYQ--------KLTEVGDPLGQGELSG 298

Query: 65  LSKAKRAFEHEDYLTAIRHCTEEIESTSSNHT-KALARLLRATVYIFTSQSTKAIEDLTQ 123
             KAK AF  E Y   I  CTEEI S+ S    K  A  LRA+ Y  T    KA+EDLT 
Sbjct: 299 FLKAKLAFATEKYEEIIPSCTEEINSSESESPFKIEALSLRASFYFLTGNLDKALEDLTT 358

Query: 124 LVEDTSVDPKIKVNAHIKRAVVHLHAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCL 183
           ++ +T  D KIKVN+ IKRA +++      T+   D D+A +V P ++D ++ RGQ+  L
Sbjct: 359 II-NTDCDVKIKVNSLIKRASIYMQN-EKLTECLEDFDKAAEVGPEISDVFHHRGQVKLL 416

Query: 184 FGQYEEALRNLDKTIALNPNFHVARAQRHF--VVHKMIVPGDRERVEQSLKEFRNFVDTH 241
             +  EA+ +  K + LNPNF VA  Q+ +    H M V  D + + QSL  F+  ++  
Sbjct: 417 MEKTNEAILDFQKAVDLNPNFSVAFVQKCYSDYRHAMQVQ-DVQLLMQSLANFKKGIEKF 475

Query: 242 SNVVEACTLFAQVLVDQEDFDGAEEYFNRSIRVDPENASLYVHRAMLMLQARGNVDEAIK 301
              VE   L+AQVL +++D++ A++ + +++ +D ENAS+YVHR +LMLQ +G +++A++
Sbjct: 476 PTCVETYVLYAQVLTEKQDYEEADKLYGKALEIDSENASIYVHRGLLMLQWKGEIEQAVE 535

Query: 302 LIEKAISIDKSCMFAYETLGTIEVQRGRLEEAVKCFNKALPLARDEAELSHIYSLRDAAI 361
           L+++ I ID  C FAYETLGT+EVQRG L  A+  FNKA+ LAR E EL+H++SLRDAA 
Sbjct: 536 LMKEGIKIDDKCEFAYETLGTVEVQRGNLVVAIDLFNKAIALARSEMELTHLFSLRDAAT 595

Query: 362 AQMKVCERYNI 372
           +Q+KV  R  I
Sbjct: 596 SQLKVTTRLGI 606



 Score = 52.0 bits (123), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 22/61 (36%), Positives = 36/61 (59%)

Query: 465 FTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQRH 524
            T+   D D+A +V P ++D ++ RGQ+  L  +  EA+ +  K + LNPNF VA  Q+ 
Sbjct: 386 LTECLEDFDKAAEVGPEISDVFHHRGQVKLLMEKTNEAILDFQKAVDLNPNFSVAFVQKC 445

Query: 525 F 525
           +
Sbjct: 446 Y 446


>gi|357604397|gb|EHJ64169.1| putative heat shock protein 70-interacting protein [Danaus
           plexippus]
          Length = 547

 Score =  263 bits (671), Expect = 2e-67,   Method: Compositional matrix adjust.
 Identities = 152/378 (40%), Positives = 218/378 (57%), Gaps = 28/378 (7%)

Query: 6   GAQHAKEEISKRSFFKPSKQFIKTYLKSFPNDPILQPDGLSNGVELTNGDTNESHELDLL 65
           G QHA+E ++KR    PSK FIKTY  +F  DPI++       VEL    TN        
Sbjct: 192 GRQHAREALAKRRPVMPSKHFIKTYFSAFSEDPIVK-------VELEENATNG------F 238

Query: 66  SKAKRAFEHEDYLTAIRHCTEEIESTSSNHTKALARLLRATVYIFTSQSTKAIEDLTQLV 125
           +KAK A +  DY + +  CTEE++S      +AL  LLRAT Y+   +  +A+ DL  ++
Sbjct: 239 AKAKHALDSLDYESVVDACTEELDSNGKYKFEAL--LLRATFYLLLGRHDEALTDLAAVI 296

Query: 126 EDTSVDPKIKVNAHIKRAVVHLHAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFG 185
            D+    K++VNA IKRA +      +  +   D   A K+DPN +D Y+ RGQ+Y L  
Sbjct: 297 -DSDAPVKVRVNALIKRASLFTQL-ENTDRCLEDFATAAKLDPNNSDIYHHRGQVYLLLE 354

Query: 186 QYEEALRNLDKTIALNPNFHVARAQ------RHFVVHKMIVPGDRERVEQSLKEFRNFVD 239
           + +EA     K + LNP+F +A  Q      RH  +HK +       + Q   +F   ++
Sbjct: 355 RMDEATAEFAKAVELNPDFSIAYIQKCYADYRHAQLHKNVTA-----LTQVRADFERALE 409

Query: 240 THSNVVEACTLFAQVLVDQEDFDGAEEYFNRSIRVDPENASLYVHRAMLMLQARGNVDEA 299
                 E   L+AQVL DQ+++  AE  F  ++ VDP NA+LYVH+ ++ LQ   + D+A
Sbjct: 410 RFPRCAEVYILYAQVLSDQQEWGHAEALFESALAVDPSNATLYVHKGLVQLQKSTDFDKA 469

Query: 300 IKLIEKAISIDKSCMFAYETLGTIEVQRGRLEEAVKCFNKALPLARDEAELSHIYSLRDA 359
           +KLI KAI ID  C FAYETLGTIEVQRG L  +++ F KA+ LA+ E E++H++SL+DA
Sbjct: 470 VKLINKAIEIDDKCDFAYETLGTIEVQRGNLRRSLELFEKAIALAKTEQEMTHLFSLKDA 529

Query: 360 AIAQMKVCERYNIKKKVS 377
           A AQ+KV ER+ +   VS
Sbjct: 530 AAAQLKVSERWGLDWTVS 547



 Score = 50.4 bits (119), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 22/59 (37%), Positives = 34/59 (57%)

Query: 467 KAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQRHF 525
           +   D   A K+DPN +D Y+ RGQ+Y L  + +EA     K + LNP+F +A  Q+ +
Sbjct: 324 RCLEDFATAAKLDPNNSDIYHHRGQVYLLLERMDEATAEFAKAVELNPDFSIAYIQKCY 382


>gi|344294611|ref|XP_003419010.1| PREDICTED: mitochondrial import receptor subunit TOM70 [Loxodonta
           africana]
          Length = 610

 Score =  258 bits (659), Expect = 5e-66,   Method: Compositional matrix adjust.
 Identities = 142/372 (38%), Positives = 218/372 (58%), Gaps = 6/372 (1%)

Query: 6   GAQHAKEEISKRSFFKPSKQFIKTYLKSFPNDPILQP---DGLSNGVELTNGDTNESHEL 62
           G + AKE+   R    PS QFIK+Y  SF +D I QP      S+  +   G+  E  E 
Sbjct: 237 GKEKAKEKYKNREPLMPSPQFIKSYFSSFTDDIISQPTLKGEKSDEDKDKEGEALEVKEN 296

Query: 63  DLLSKAKRAFEHEDYLTAIRHCTEEIESTSSNHTKALARLLRATVYIFTSQSTKAIEDLT 122
               KAK+  E E+Y   I  C++EI++    H +A A LLRAT Y+    ++ A  DL 
Sbjct: 297 SGYLKAKQYMEEENYDKIISECSKEIDAEGGRH-RAEALLLRATFYLLVGNASAAKPDLD 355

Query: 123 QLVEDTSVDPKIKVNAHIKRAVVHLHAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYC 182
           Q++     D K++ NA IKR  +++        +  D + A  +DP  AD Y+ RGQ+  
Sbjct: 356 QVISLKGADVKLRANALIKRGSMYMQQQEPLL-STQDFNMAADIDPQNADVYHHRGQLKI 414

Query: 183 LFGQYEEALRNLDKTIALNPNFHVARAQRHFVVHKMIVPGDRE-RVEQSLKEFRNFVDTH 241
           L  Q EEA+ + D+ I L P   +A+AQ+ F +++    G+   +++ ++K F   +   
Sbjct: 415 LLDQVEEAVADFDECIRLRPESALAQAQKCFALYRQAYTGNNSSQIQAAMKGFEEVIKKF 474

Query: 242 SNVVEACTLFAQVLVDQEDFDGAEEYFNRSIRVDPENASLYVHRAMLMLQARGNVDEAIK 301
               E   L+AQ L DQ+ F  A+E +++ I ++P+NA+ YVH+ +L LQ + ++D+ ++
Sbjct: 475 PRCAEGYALYAQALTDQQQFGKADEMYDKCIDLEPDNATTYVHKGLLQLQWKQDLDKGLE 534

Query: 302 LIEKAISIDKSCMFAYETLGTIEVQRGRLEEAVKCFNKALPLARDEAELSHIYSLRDAAI 361
           LI KAI ID  C FAYET+GTIEVQRG +E+A+  FNKA+ LA+ E E++H+YSL DAA 
Sbjct: 535 LISKAIEIDNKCDFAYETMGTIEVQRGNMEKAIDMFNKAINLAKSEMEMAHLYSLCDAAH 594

Query: 362 AQMKVCERYNIK 373
           AQ +V ++Y +K
Sbjct: 595 AQTEVAKKYGLK 606



 Score = 48.1 bits (113), Expect = 0.011,   Method: Compositional matrix adjust.
 Identities = 23/56 (41%), Positives = 33/56 (58%)

Query: 471 DLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQRHFV 526
           D + A  +DP  AD Y+ RGQ+  L  Q EEA+ + D+ I L P   +A+AQ+ F 
Sbjct: 391 DFNMAADIDPQNADVYHHRGQLKILLDQVEEAVADFDECIRLRPESALAQAQKCFA 446


>gi|327268894|ref|XP_003219230.1| PREDICTED: mitochondrial import receptor subunit TOM70-like [Anolis
           carolinensis]
          Length = 548

 Score =  258 bits (658), Expect = 7e-66,   Method: Compositional matrix adjust.
 Identities = 143/375 (38%), Positives = 222/375 (59%), Gaps = 13/375 (3%)

Query: 6   GAQHAKEEISKRSFFKPSKQFIKTYLKSFPNDPILQPDGLSNGVELTNGDTNESHELDLL 65
           G + AKE+   R    PS QFIK+Y  SF +D I QP  L  G E ++ D ++  E  ++
Sbjct: 176 GKEKAKEKYKNREPLMPSPQFIKSYFSSFTDDIISQP--LLKG-EKSDEDKDKEGEASVV 232

Query: 66  S------KAKRAFEHEDYLTAIRHCTEEIESTSSNHTKALARLLRATVYIFTSQSTKAIE 119
                  KAK+  + E+Y   I  CT+EIE+      +AL  LLRAT Y+    +  A  
Sbjct: 233 KENCGYLKAKKYMDEENYDKIISECTKEIEAKGKYMAEAL--LLRATFYLLIGNANAAKP 290

Query: 120 DLTQLVEDTSVDPKIKVNAHIKRAVVHLHAASDFTKAFADLDEAEKVDPNVADSYYQRGQ 179
           DL Q++     + K++ NA IKR  +++        +  D + A  +DP  AD Y+ RGQ
Sbjct: 291 DLNQVISMEDANVKLRANALIKRGSMYMQQQQPML-STQDFNMAADIDPQNADVYHHRGQ 349

Query: 180 IYCLFGQYEEALRNLDKTIALNPNFHVARAQRHFVVHKMIVPGDRE-RVEQSLKEFRNFV 238
           +  L  Q EEA+ + D+ I L P+  +A+AQ+ F +++    G    +V+ ++K F + +
Sbjct: 350 LKILLDQVEEAVEDFDECIRLRPDSALAQAQKCFALYRQAYTGSNSLQVQAAMKGFEDVI 409

Query: 239 DTHSNVVEACTLFAQVLVDQEDFDGAEEYFNRSIRVDPENASLYVHRAMLMLQARGNVDE 298
                  E   L+AQ L DQ+ F  A+E +++ I ++P+NA+ YVH+ +L LQ + ++D+
Sbjct: 410 KKFPRCAEGYALYAQALTDQQQFGKADEMYDKCIDLEPDNATTYVHKGLLQLQWKQDLDK 469

Query: 299 AIKLIEKAISIDKSCMFAYETLGTIEVQRGRLEEAVKCFNKALPLARDEAELSHIYSLRD 358
            ++LI KAI ID  C FAYET+GTIEVQRG L++A++ FNKA+ LA+ E E++H+YSL D
Sbjct: 470 GLELISKAIEIDNKCDFAYETMGTIEVQRGNLDKAIEMFNKAINLAKSETEMAHLYSLCD 529

Query: 359 AAIAQMKVCERYNIK 373
           AA AQ +V ++Y +K
Sbjct: 530 AAYAQTEVAKKYGLK 544



 Score = 49.3 bits (116), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 23/56 (41%), Positives = 34/56 (60%)

Query: 471 DLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQRHFV 526
           D + A  +DP  AD Y+ RGQ+  L  Q EEA+ + D+ I L P+  +A+AQ+ F 
Sbjct: 329 DFNMAADIDPQNADVYHHRGQLKILLDQVEEAVEDFDECIRLRPDSALAQAQKCFA 384


>gi|449277464|gb|EMC85620.1| Mitochondrial import receptor subunit TOM70, partial [Columba
           livia]
          Length = 501

 Score =  257 bits (657), Expect = 1e-65,   Method: Compositional matrix adjust.
 Identities = 142/372 (38%), Positives = 219/372 (58%), Gaps = 7/372 (1%)

Query: 6   GAQHAKEEISKRSFFKPSKQFIKTYLKSFPNDPILQP---DGLSNGVELTNGDTNESHEL 62
           G + AKE+   R    PS QFIK+Y  SF +D I QP      S+  +   G+ +E  E 
Sbjct: 129 GKEKAKEKYKNREPLMPSPQFIKSYFSSFTDDIISQPLLKGEKSDEDKDKEGEASEVKEN 188

Query: 63  DLLSKAKRAFEHEDYLTAIRHCTEEIESTSSNHTKALARLLRATVYIFTSQSTKAIEDLT 122
               +AK+  E E+Y   I  CT+EIE+      +AL  LLRAT Y+    +  A  DL 
Sbjct: 189 SGYLRAKQYMEEENYDKIISECTKEIEAKGKYMAEAL--LLRATFYLLIGNANAAKPDLD 246

Query: 123 QLVEDTSVDPKIKVNAHIKRAVVHLHAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYC 182
           Q++     + K++ NA IKR  +++        +  D + A  +DP  AD Y+ RGQ+  
Sbjct: 247 QVISMEDANVKLRANALIKRGSMYMQQQQPVL-STQDFNMAADIDPQNADVYHHRGQLKI 305

Query: 183 LFGQYEEALRNLDKTIALNPNFHVARAQRHFVVHKMIVPGDRE-RVEQSLKEFRNFVDTH 241
           L  Q EEA+ + D+ I L P+  +A+AQ+ F +++    G+    V+ ++K F + +   
Sbjct: 306 LLDQIEEAVEDFDECIRLRPDSALAQAQKCFALYRQAYTGNNPLPVQVAMKGFEDVIKKF 365

Query: 242 SNVVEACTLFAQVLVDQEDFDGAEEYFNRSIRVDPENASLYVHRAMLMLQARGNVDEAIK 301
               E   L+AQ L DQ+ F  A+E +++ I ++P+NA+ YVH+ +L LQ + ++D+ ++
Sbjct: 366 PKCAEGYALYAQALTDQQQFGKADEMYDKCIELEPDNATTYVHKGLLQLQWKQDLDKGLE 425

Query: 302 LIEKAISIDKSCMFAYETLGTIEVQRGRLEEAVKCFNKALPLARDEAELSHIYSLRDAAI 361
           LI KAI ID  C FAYET+GTIEVQRG L++A++ FNKA+ LA+ E E++H+YSL DAA 
Sbjct: 426 LISKAIEIDNKCDFAYETMGTIEVQRGNLDKAIEMFNKAINLAKSEMEMAHLYSLCDAAY 485

Query: 362 AQMKVCERYNIK 373
           AQ +V ++Y +K
Sbjct: 486 AQTEVAKKYGLK 497



 Score = 49.3 bits (116), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 23/56 (41%), Positives = 34/56 (60%)

Query: 471 DLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQRHFV 526
           D + A  +DP  AD Y+ RGQ+  L  Q EEA+ + D+ I L P+  +A+AQ+ F 
Sbjct: 282 DFNMAADIDPQNADVYHHRGQLKILLDQIEEAVEDFDECIRLRPDSALAQAQKCFA 337


>gi|126325626|ref|XP_001363876.1| PREDICTED: mitochondrial import receptor subunit TOM70 [Monodelphis
           domestica]
          Length = 612

 Score =  257 bits (656), Expect = 1e-65,   Method: Compositional matrix adjust.
 Identities = 142/372 (38%), Positives = 219/372 (58%), Gaps = 7/372 (1%)

Query: 6   GAQHAKEEISKRSFFKPSKQFIKTYLKSFPNDPILQP---DGLSNGVELTNGDTNESHEL 62
           G + AKE+   R    PS QFIK+Y  SF +D I QP      S+  +   G+  E  E 
Sbjct: 240 GKEKAKEKYKNREPLMPSPQFIKSYFSSFTDDIISQPMLKGEKSDEDKDKEGEALEVKEN 299

Query: 63  DLLSKAKRAFEHEDYLTAIRHCTEEIESTSSNHTKALARLLRATVYIFTSQSTKAIEDLT 122
               KAK+  E E+Y   I  CT+EI++      +AL  LLRAT Y+    +  A  DL 
Sbjct: 300 SGYLKAKQYMEEENYDKIISECTKEIDAQGKYTAEAL--LLRATFYLLIGNANAAKPDLD 357

Query: 123 QLVEDTSVDPKIKVNAHIKRAVVHLHAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYC 182
           Q++     + K++ NA IKR  +++        +  D + A  +DP  AD Y+ RGQ+  
Sbjct: 358 QVISMEEANVKLRANALIKRGSMYMQQQQPLL-STQDFNMAADIDPQNADVYHHRGQLKI 416

Query: 183 LFGQYEEALRNLDKTIALNPNFHVARAQRHFVVHKMIVPGDRE-RVEQSLKEFRNFVDTH 241
           L  Q EEA+ + D+ I L P+  +A+AQ+ F +++    G+   +V+ ++K F + +   
Sbjct: 417 LLDQVEEAVADFDECIRLRPDSALAQAQKCFALYRQAYTGNNSTQVQAAMKGFEDVIKKF 476

Query: 242 SNVVEACTLFAQVLVDQEDFDGAEEYFNRSIRVDPENASLYVHRAMLMLQARGNVDEAIK 301
           S   E   L+AQ L DQ+ F  A+E +++ I ++P+NA+ YVH+ +L LQ + ++D+ ++
Sbjct: 477 SRCAEGYALYAQALTDQQQFGKADEMYDKCIDLEPDNATTYVHKGLLQLQWKQDLDKGLE 536

Query: 302 LIEKAISIDKSCMFAYETLGTIEVQRGRLEEAVKCFNKALPLARDEAELSHIYSLRDAAI 361
           LI KAI ID  C FAYET+GTIEVQRG +++A+  FNKA+ LA+ E E++H+YSL DAA 
Sbjct: 537 LISKAIEIDNKCDFAYETMGTIEVQRGNMDKAIDMFNKAINLAKSEMEMAHLYSLCDAAY 596

Query: 362 AQMKVCERYNIK 373
           AQ +V ++Y +K
Sbjct: 597 AQTEVAKKYGLK 608



 Score = 48.9 bits (115), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 23/56 (41%), Positives = 34/56 (60%)

Query: 471 DLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQRHFV 526
           D + A  +DP  AD Y+ RGQ+  L  Q EEA+ + D+ I L P+  +A+AQ+ F 
Sbjct: 393 DFNMAADIDPQNADVYHHRGQLKILLDQVEEAVADFDECIRLRPDSALAQAQKCFA 448


>gi|326912988|ref|XP_003202825.1| PREDICTED: mitochondrial import receptor subunit TOM70-like
           [Meleagris gallopavo]
          Length = 515

 Score =  256 bits (654), Expect = 2e-65,   Method: Compositional matrix adjust.
 Identities = 143/372 (38%), Positives = 219/372 (58%), Gaps = 7/372 (1%)

Query: 6   GAQHAKEEISKRSFFKPSKQFIKTYLKSFPNDPILQP---DGLSNGVELTNGDTNESHEL 62
           G + AKE+   R    PS QFIK+Y  SF +D I QP      S+  +   G+ +E  E 
Sbjct: 143 GKEKAKEKYKNREPLMPSPQFIKSYFSSFTDDIISQPLLKGEKSDEDKDKEGEASEVKEN 202

Query: 63  DLLSKAKRAFEHEDYLTAIRHCTEEIESTSSNHTKALARLLRATVYIFTSQSTKAIEDLT 122
               +AK+  E E+Y   I  CT+EIE+      +AL  LLRAT Y+    +  A  DL 
Sbjct: 203 SGYLRAKQYMEEENYDKIISECTKEIEAKGKYMAEAL--LLRATFYLLIGNANAAKPDLD 260

Query: 123 QLVEDTSVDPKIKVNAHIKRAVVHLHAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYC 182
           Q++     + K++ NA IKR  +++        +  D + A  +DP  AD Y+ RGQ+  
Sbjct: 261 QVISMEDANVKLRANALIKRGSMYMQQQQPAL-STQDFNMAADIDPQNADVYHHRGQLKI 319

Query: 183 LFGQYEEALRNLDKTIALNPNFHVARAQRHFVVHKMIVPGDRE-RVEQSLKEFRNFVDTH 241
           L  Q EEA+ + D+ I L P+  +A+AQ+ F +++    G+    V+ ++K F + V   
Sbjct: 320 LLDQIEEAVEDFDECIRLRPDSALAQAQKCFALYRQAYTGNNPLPVQVAMKGFEDVVKKF 379

Query: 242 SNVVEACTLFAQVLVDQEDFDGAEEYFNRSIRVDPENASLYVHRAMLMLQARGNVDEAIK 301
               E   L+AQ L DQ+ F  A+E +++ I ++P+NA+ YVH+ +L LQ + ++D+ ++
Sbjct: 380 PKCAEGYALYAQALTDQQQFGKADEMYDKCIDLEPDNATTYVHKGLLQLQWKQDLDKGLE 439

Query: 302 LIEKAISIDKSCMFAYETLGTIEVQRGRLEEAVKCFNKALPLARDEAELSHIYSLRDAAI 361
           LI KAI ID  C FAYET+GTIEVQRG L++A++ FNKA+ LA+ E E++H+YSL DAA 
Sbjct: 440 LISKAIEIDNKCDFAYETMGTIEVQRGNLDKAIEMFNKAINLAKSEMEMAHLYSLCDAAY 499

Query: 362 AQMKVCERYNIK 373
           AQ +V ++Y +K
Sbjct: 500 AQTEVAKKYGLK 511



 Score = 49.3 bits (116), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 23/56 (41%), Positives = 34/56 (60%)

Query: 471 DLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQRHFV 526
           D + A  +DP  AD Y+ RGQ+  L  Q EEA+ + D+ I L P+  +A+AQ+ F 
Sbjct: 296 DFNMAADIDPQNADVYHHRGQLKILLDQIEEAVEDFDECIRLRPDSALAQAQKCFA 351


>gi|156550027|ref|XP_001604755.1| PREDICTED: mitochondrial import receptor subunit TOM70-like
           [Nasonia vitripennis]
          Length = 575

 Score =  256 bits (654), Expect = 2e-65,   Method: Compositional matrix adjust.
 Identities = 144/368 (39%), Positives = 220/368 (59%), Gaps = 15/368 (4%)

Query: 6   GAQHAKEEISKRSFFKPSKQFIKTYLKSFPNDPILQPDGLSNGVELTNGDTNESHELDLL 65
           G QHA+E ++ +    PSK FI TY  +F NDPIL         +L   +T E +     
Sbjct: 206 GKQHAQEYMATKKPIMPSKHFIGTYFLAFHNDPIL--------AKLDGSETVEDN--TPF 255

Query: 66  SKAKRAFEHEDYLTAIRHCTEEIESTSSNHT---KALARLLRATVYIFTSQSTKAIEDLT 122
           +KA  A + ++Y   I  CTEE+++ +++     K    +LR T Y+   Q   A+EDL+
Sbjct: 256 NKALTALKKQEYDDVIPLCTEELKNLATDEDSLHKMEVLVLRGTFYLLLGQHENALEDLS 315

Query: 123 QLVEDTSVDPKIKVNAHIKRAVVHLHAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYC 182
            ++   +   ++KVNA IKRA +++   S   K+F D ++AEK+D N  D Y+ RGQ++ 
Sbjct: 316 AVIGSDASSKELKVNALIKRASMYIQLESA-EKSFNDFEDAEKLDRNCGDVYHNRGQVHL 374

Query: 183 LFGQYEEALRNLDKTIALNPNFHVARAQRHFVVHKMIVPG-DRERVEQSLKEFRNFVDTH 241
           L  + +EA  + +K + LNP F VA  Q+ F  ++  V   D   +  S+  F    +  
Sbjct: 375 LMERVDEAKADFEKAVELNPGFGVAYVQKCFADYRFAVSKRDMNLMNTSMTNFNKAFEKF 434

Query: 242 SNVVEACTLFAQVLVDQEDFDGAEEYFNRSIRVDPENASLYVHRAMLMLQARGNVDEAIK 301
            +  E  TL+AQ+LVD +DF  A+ YF ++ + DP+NA++ V+R +L LQ + N+++A++
Sbjct: 435 PDCSECYTLYAQMLVDSQDFARADSYFLKAAKRDPKNATILVYRGLLQLQWQNNIEKAVE 494

Query: 302 LIEKAISIDKSCMFAYETLGTIEVQRGRLEEAVKCFNKALPLARDEAELSHIYSLRDAAI 361
            I KAI +D  C FAYETLGTIEVQRG L++A+  F+KAL L R   EL+HI+SLRDAA 
Sbjct: 495 YIRKAIELDDKCEFAYETLGTIEVQRGNLKDAISLFDKALALGRTSMELTHIFSLRDAAQ 554

Query: 362 AQMKVCER 369
           AQ+ V +R
Sbjct: 555 AQLTVSDR 562



 Score = 56.6 bits (135), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 25/59 (42%), Positives = 38/59 (64%)

Query: 467 KAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQRHF 525
           K+F D ++AEK+D N  D Y+ RGQ++ L  + +EA  + +K + LNP F VA  Q+ F
Sbjct: 347 KSFNDFEDAEKLDRNCGDVYHNRGQVHLLMERVDEAKADFEKAVELNPGFGVAYVQKCF 405


>gi|170032363|ref|XP_001844051.1| mitochondrial precursor protein import receptor [Culex
           quinquefasciatus]
 gi|167872337|gb|EDS35720.1| mitochondrial precursor protein import receptor [Culex
           quinquefasciatus]
          Length = 575

 Score =  256 bits (654), Expect = 2e-65,   Method: Compositional matrix adjust.
 Identities = 143/370 (38%), Positives = 221/370 (59%), Gaps = 16/370 (4%)

Query: 6   GAQHAKEEISKRSFFKPSKQFIKTYLKSFPNDPILQPDGLSNGVELTNGDTNESHELDLL 65
           G QHA E + +++  KPSK F+K Y  SF +DPI +         L    T    E    
Sbjct: 205 GQQHATEAMKEKTDLKPSKFFVKNYFASFADDPIRK---------LVIAST----EPKGF 251

Query: 66  SKAKRAFEHEDYLTAIRHCTEEIESTSSN-HTKALARLLRATVYIFTSQSTKAIEDLTQL 124
            KAK   +   Y   +  CTEEIES+ ++   K  A LLRAT Y+ T++  +A  DL  +
Sbjct: 252 VKAKLLLDQGIYDGIVAACTEEIESSEADAEYKVEATLLRATFYLLTARYPEATVDLDSV 311

Query: 125 VEDTSVDPKIKVNAHIKRAVVHLHAASDFTK-AFADLDEAEKVDPNVADSYYQRGQIYCL 183
           +     D K++ NA IKRA + +    +  +  F    +AE+VDP+ +D Y+ RGQ+Y L
Sbjct: 312 IGMELADKKLRANALIKRASLAMQTVPNIPEECFKYFAQAEQVDPDNSDIYHHRGQVYIL 371

Query: 184 FGQYEEALRNLDKTIALNPNFHVARAQRHFVVHKM-IVPGDRERVEQSLKEFRNFVDTHS 242
             +  EA+ + +K  AL P+  +    R +  ++  ++  D   + + ++ FR  +D   
Sbjct: 372 IERLSEAISDFEKASALCPDSGIIEIHRCYASYRQALINKDEGALMKVMRAFREAIDRFP 431

Query: 243 NVVEACTLFAQVLVDQEDFDGAEEYFNRSIRVDPENASLYVHRAMLMLQARGNVDEAIKL 302
           + VE  +L AQVL DQ+++  A+ +F ++ +++PENA + VH+A+L LQ +G+V+ A++L
Sbjct: 432 DCVECYSLMAQVLSDQQEYHEADNFFEKATKIEPENAQILVHKALLQLQWKGDVESAVQL 491

Query: 303 IEKAISIDKSCMFAYETLGTIEVQRGRLEEAVKCFNKALPLARDEAELSHIYSLRDAAIA 362
           IEKAI+ID  C FAYETLGTI+VQRG+L+EA+K F  A+ LA+ E EL H+YSL+DAAIA
Sbjct: 492 IEKAIAIDDKCEFAYETLGTIQVQRGKLQEAIKLFESAIQLAKTEMELVHLYSLKDAAIA 551

Query: 363 QMKVCERYNI 372
           Q+ V +   +
Sbjct: 552 QVNVTKSMGL 561



 Score = 43.9 bits (102), Expect = 0.20,   Method: Compositional matrix adjust.
 Identities = 20/59 (33%), Positives = 34/59 (57%)

Query: 467 KAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQRHF 525
           + F    +AE+VDP+ +D Y+ RGQ+Y L  +  EA+ + +K  AL P+  +    R +
Sbjct: 343 ECFKYFAQAEQVDPDNSDIYHHRGQVYILIERLSEAISDFEKASALCPDSGIIEIHRCY 401


>gi|50729660|ref|XP_416605.1| PREDICTED: mitochondrial import receptor subunit TOM70 [Gallus
           gallus]
          Length = 583

 Score =  256 bits (653), Expect = 3e-65,   Method: Compositional matrix adjust.
 Identities = 142/372 (38%), Positives = 219/372 (58%), Gaps = 7/372 (1%)

Query: 6   GAQHAKEEISKRSFFKPSKQFIKTYLKSFPNDPILQP---DGLSNGVELTNGDTNESHEL 62
           G + AKE+   R    PS QFIK+Y  SF +D I QP      S+  +   G+ +E  E 
Sbjct: 211 GKEKAKEKYKNREPLMPSPQFIKSYFSSFTDDIISQPLLKGEKSDEDKDKEGEASEVKEN 270

Query: 63  DLLSKAKRAFEHEDYLTAIRHCTEEIESTSSNHTKALARLLRATVYIFTSQSTKAIEDLT 122
               +AK+  E E+Y   I  CT+EIE+      +AL  LLRAT Y+    +  A  DL 
Sbjct: 271 SGYLRAKQYMEEENYDKIISECTKEIEAKGKYMAEAL--LLRATFYLLIGNANAAKPDLD 328

Query: 123 QLVEDTSVDPKIKVNAHIKRAVVHLHAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYC 182
           Q++     + K++ NA IKR  +++        +  D + A  +DP  AD Y+ RGQ+  
Sbjct: 329 QVISMEDANVKLRANALIKRGSMYMQQQQPAL-STQDFNMAADIDPQNADVYHHRGQLKI 387

Query: 183 LFGQYEEALRNLDKTIALNPNFHVARAQRHFVVHKMIVPGDRE-RVEQSLKEFRNFVDTH 241
           L  Q EEA+ + D+ I L P+  +A+AQ+ F +++    G+    V+ ++K F + +   
Sbjct: 388 LLDQIEEAVEDFDECIRLRPDSALAQAQKCFALYRQAYTGNNPLPVQVAMKGFEDVIKKF 447

Query: 242 SNVVEACTLFAQVLVDQEDFDGAEEYFNRSIRVDPENASLYVHRAMLMLQARGNVDEAIK 301
               E   L+AQ L DQ+ F  A+E +++ I ++P+NA+ YVH+ +L LQ + ++D+ ++
Sbjct: 448 PKCAEGYALYAQALTDQQQFGKADEMYDKCIDLEPDNATTYVHKGLLQLQWKQDLDKGLE 507

Query: 302 LIEKAISIDKSCMFAYETLGTIEVQRGRLEEAVKCFNKALPLARDEAELSHIYSLRDAAI 361
           LI KAI ID  C FAYET+GTIEVQRG L++A++ FNKA+ LA+ E E++H+YSL DAA 
Sbjct: 508 LISKAIEIDNKCDFAYETMGTIEVQRGNLDKAIEMFNKAINLAKSEMEMAHLYSLCDAAY 567

Query: 362 AQMKVCERYNIK 373
           AQ +V ++Y +K
Sbjct: 568 AQTEVAKKYGLK 579



 Score = 48.9 bits (115), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 23/56 (41%), Positives = 34/56 (60%)

Query: 471 DLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQRHFV 526
           D + A  +DP  AD Y+ RGQ+  L  Q EEA+ + D+ I L P+  +A+AQ+ F 
Sbjct: 364 DFNMAADIDPQNADVYHHRGQLKILLDQIEEAVEDFDECIRLRPDSALAQAQKCFA 419


>gi|395518911|ref|XP_003763599.1| PREDICTED: mitochondrial import receptor subunit TOM70 [Sarcophilus
           harrisii]
          Length = 554

 Score =  254 bits (650), Expect = 6e-65,   Method: Compositional matrix adjust.
 Identities = 141/372 (37%), Positives = 218/372 (58%), Gaps = 7/372 (1%)

Query: 6   GAQHAKEEISKRSFFKPSKQFIKTYLKSFPNDPILQP---DGLSNGVELTNGDTNESHEL 62
           G + AKE+   R    PS QFIK+Y  SF +D I QP      S+  +   G+  E  E 
Sbjct: 182 GKEKAKEKYKNREPLMPSPQFIKSYFSSFTDDIISQPMLKGEKSDEDKDKEGEALEVREN 241

Query: 63  DLLSKAKRAFEHEDYLTAIRHCTEEIESTSSNHTKALARLLRATVYIFTSQSTKAIEDLT 122
               KAK+  E E+Y   I  CT+EI++      +AL  LLRAT Y+    +  A  DL 
Sbjct: 242 SGYLKAKQYMEEENYDKIISECTKEIDARGKYTAEAL--LLRATFYLLIGNANAAKPDLD 299

Query: 123 QLVEDTSVDPKIKVNAHIKRAVVHLHAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYC 182
           Q++     + K++ NA IKR  +++        +  D + A  +DP  AD Y+ RGQ+  
Sbjct: 300 QVISMEDANVKLRANALIKRGSMYMQQQQPLL-STQDFNMAADIDPQNADVYHHRGQLKI 358

Query: 183 LFGQYEEALRNLDKTIALNPNFHVARAQRHFVVHKMIVPGDRE-RVEQSLKEFRNFVDTH 241
           L  Q EEA+ + D+ I L P+  +A+AQ+ F +++    G+   +V+ ++K F + +   
Sbjct: 359 LLDQVEEAVADFDECIRLRPDSALAQAQKCFALYRQAYTGNNSTQVQAAMKGFEDVIKKF 418

Query: 242 SNVVEACTLFAQVLVDQEDFDGAEEYFNRSIRVDPENASLYVHRAMLMLQARGNVDEAIK 301
               E   L+AQ L DQ+ F  A+E +++ I ++P+NA+ YVH+ +L LQ + ++D+ ++
Sbjct: 419 PRCAEGYALYAQALTDQQQFGKADEMYDKCIDLEPDNATTYVHKGLLQLQWKQDLDKGLE 478

Query: 302 LIEKAISIDKSCMFAYETLGTIEVQRGRLEEAVKCFNKALPLARDEAELSHIYSLRDAAI 361
           LI KAI ID  C FAYET+GTIEVQRG +++A+  FNKA+ LA+ E E++H+YSL DAA 
Sbjct: 479 LISKAIEIDNKCDFAYETMGTIEVQRGNMDKAIDMFNKAINLAKSEMEMAHLYSLCDAAY 538

Query: 362 AQMKVCERYNIK 373
           AQ +V ++Y +K
Sbjct: 539 AQTEVAKKYGLK 550



 Score = 48.9 bits (115), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 23/56 (41%), Positives = 34/56 (60%)

Query: 471 DLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQRHFV 526
           D + A  +DP  AD Y+ RGQ+  L  Q EEA+ + D+ I L P+  +A+AQ+ F 
Sbjct: 335 DFNMAADIDPQNADVYHHRGQLKILLDQVEEAVADFDECIRLRPDSALAQAQKCFA 390


>gi|224044433|ref|XP_002194182.1| PREDICTED: mitochondrial import receptor subunit TOM70 [Taeniopygia
           guttata]
          Length = 584

 Score =  254 bits (650), Expect = 6e-65,   Method: Compositional matrix adjust.
 Identities = 142/372 (38%), Positives = 218/372 (58%), Gaps = 7/372 (1%)

Query: 6   GAQHAKEEISKRSFFKPSKQFIKTYLKSFPNDPILQP---DGLSNGVELTNGDTNESHEL 62
           G + AKE+   R    PS QFIK+Y  SF +D I QP      S+  +   G+ +E  E 
Sbjct: 212 GKEKAKEKYKNREPLMPSPQFIKSYFSSFTDDIISQPLLKGEKSDEDKDKEGEASEVKEN 271

Query: 63  DLLSKAKRAFEHEDYLTAIRHCTEEIESTSSNHTKALARLLRATVYIFTSQSTKAIEDLT 122
               +AK+  E E+Y   I   T+EIE+      +AL  LLRAT Y+    ++ A  DL 
Sbjct: 272 SGYLRAKQYMEEENYDKIISESTKEIEAKGKYMAEAL--LLRATFYLLIGNASAAKPDLD 329

Query: 123 QLVEDTSVDPKIKVNAHIKRAVVHLHAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYC 182
           Q++     + K++ NA IKR  +++        +  D + A  +DP  AD Y+ RGQ+  
Sbjct: 330 QVISMEDANVKLRANALIKRGSMYMQQQQPGL-STQDFNTAADIDPQNADVYHHRGQLKI 388

Query: 183 LFGQYEEALRNLDKTIALNPNFHVARAQRHFVVHKMIVPGDRE-RVEQSLKEFRNFVDTH 241
           L  Q EEA+ + D+ I L PN  +A+AQ+ F +++    G     V+ ++K F + +   
Sbjct: 389 LLDQIEEAVEDFDECIRLRPNSALAQAQKCFALYRQAYTGSNALTVQAAMKGFEDVIKKF 448

Query: 242 SNVVEACTLFAQVLVDQEDFDGAEEYFNRSIRVDPENASLYVHRAMLMLQARGNVDEAIK 301
               E   L+AQ L DQ+ F  A+E +++ I ++P+NA+ YVH+ +L LQ + ++D+ ++
Sbjct: 449 PKCAEGYALYAQALTDQQQFGKADEMYDKCIDLEPDNATTYVHKGLLQLQWKQDLDKGLE 508

Query: 302 LIEKAISIDKSCMFAYETLGTIEVQRGRLEEAVKCFNKALPLARDEAELSHIYSLRDAAI 361
           LI KAI ID  C FAYET+GTIEVQRG L++A++ FNKA+ LA+ E E++H+YSL DAA 
Sbjct: 509 LISKAIEIDNKCDFAYETMGTIEVQRGNLDKAIEMFNKAINLAKSEMEMAHLYSLCDAAY 568

Query: 362 AQMKVCERYNIK 373
           AQ +V ++Y +K
Sbjct: 569 AQTEVAKKYGLK 580



 Score = 51.6 bits (122), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 24/56 (42%), Positives = 34/56 (60%)

Query: 471 DLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQRHFV 526
           D + A  +DP  AD Y+ RGQ+  L  Q EEA+ + D+ I L PN  +A+AQ+ F 
Sbjct: 365 DFNTAADIDPQNADVYHHRGQLKILLDQIEEAVEDFDECIRLRPNSALAQAQKCFA 420


>gi|383855568|ref|XP_003703282.1| PREDICTED: mitochondrial import receptor subunit TOM70-like
           [Megachile rotundata]
          Length = 579

 Score =  253 bits (647), Expect = 2e-64,   Method: Compositional matrix adjust.
 Identities = 148/376 (39%), Positives = 211/376 (56%), Gaps = 20/376 (5%)

Query: 6   GAQHAKEEISKRSFFKPSKQFIKTYLKSFPNDPILQPDGLSNGVELTNGDTNESHELDLL 65
           G QHA E ++ +    PSK FIKTY+ +F  DP+           L N  T++S+     
Sbjct: 211 GRQHAMEHLANKKLIMPSKYFIKTYISTFHKDPVF--------ARLQN--TDDSNISKGF 260

Query: 66  SKAKRAFEHEDYLTAIRHCTEEIESTSSNHT--KALARLLRATVYIFTSQSTKAIEDLTQ 123
            K     + + Y   I  C EEI ++ SN    K    LLRAT Y+   Q   AIED   
Sbjct: 261 VKILECVKEQKYDDVIPLCNEEINNSESNTLPHKMEILLLRATFYLLLGQHDAAIEDFGT 320

Query: 124 LVEDTSVDPKIKVNAHIKRAVVHLHAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCL 183
           ++   SV   +KVNA IKRA + +   S   K+F+D   A ++DP   D Y+ RGQ+  L
Sbjct: 321 IINSDSVPNDVKVNALIKRATLFMQLESQ-DKSFSDFKMAAELDPECGDIYHHRGQVNLL 379

Query: 184 FGQYEEALRNLDKTIALNPNFHVARAQRHFVVHKM-IVPGDRERVEQSLKEFRNFVDTHS 242
             + +EA  +  K + LNP F VA  Q+ F  ++  IV  D E + +++K F   ++   
Sbjct: 380 MEKIDEARDDFKKAVDLNPTFGVAFVQKCFADYRYGIVKRDMEVIAKAMKGFEEAIEKFP 439

Query: 243 NVVEACTLFAQVLVDQEDFDGAEEYFNRSIRVDPENASLYVHRAMLMLQARGNVDEAIKL 302
           +  E  TL+AQ+L + ++F  A+ YF ++I  DP NA++YVHR +L LQ   +VD+A++ 
Sbjct: 440 DCSECYTLYAQMLSETQEFQKADMYFAKAIEKDPTNATIYVHRGLLQLQWNADVDKAVEY 499

Query: 303 IEKAISIDKSCMFAYETLGTIEVQRGRLEEAVKCFNKALPLARDEAELSHIYSLRDAAIA 362
           I KA+ +D  C + YETLGTIEVQRG L EA+K F+KAL L R   EL+HI+SLRDAA  
Sbjct: 500 INKALLLDDKCEYGYETLGTIEVQRGNLTEAIKLFDKALALGRTAMELTHIFSLRDAAKT 559

Query: 363 QMKVCERYNIKKKVSP 378
           Q+       IK K+ P
Sbjct: 560 QL------TIKDKLGP 569



 Score = 49.7 bits (117), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 23/59 (38%), Positives = 34/59 (57%)

Query: 467 KAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQRHF 525
           K+F+D   A ++DP   D Y+ RGQ+  L  + +EA  +  K + LNP F VA  Q+ F
Sbjct: 351 KSFSDFKMAAELDPECGDIYHHRGQVNLLMEKIDEARDDFKKAVDLNPTFGVAFVQKCF 409


>gi|426217373|ref|XP_004002928.1| PREDICTED: mitochondrial import receptor subunit TOM70 [Ovis aries]
          Length = 609

 Score =  253 bits (645), Expect = 2e-64,   Method: Compositional matrix adjust.
 Identities = 140/372 (37%), Positives = 216/372 (58%), Gaps = 7/372 (1%)

Query: 6   GAQHAKEEISKRSFFKPSKQFIKTYLKSFPNDPILQP---DGLSNGVELTNGDTNESHEL 62
           G + AKE+   R    PS QFIK+Y  SF +D I QP      S+  +   G+  E  E 
Sbjct: 237 GKEKAKEKYKNREPLMPSPQFIKSYFSSFTDDIISQPMLKGEKSDEDKDKEGEALEVKEN 296

Query: 63  DLLSKAKRAFEHEDYLTAIRHCTEEIESTSSNHTKALARLLRATVYIFTSQSTKAIEDLT 122
               KAK+  E E+Y   I  C++EI++      +AL  LLRAT Y+    +  A  DL 
Sbjct: 297 SGYLKAKQYMEEENYDKIISECSKEIDAQGKYMAEAL--LLRATFYLLIGNANAAKPDLD 354

Query: 123 QLVEDTSVDPKIKVNAHIKRAVVHLHAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYC 182
           Q++     + K++ NA IKR  +++        +  D + A  +DP  AD Y+ RGQ+  
Sbjct: 355 QVISLQEANVKLRANALIKRGSMYMQQQQPLL-STQDFNMAADIDPQNADVYHHRGQLKI 413

Query: 183 LFGQYEEALRNLDKTIALNPNFHVARAQRHFVVHKMIVPGDRE-RVEQSLKEFRNFVDTH 241
           L  Q EEA+ + D+ I L P   +A+AQ+ F +++    G+   +++ ++K F   +   
Sbjct: 414 LLDQVEEAVADFDECIRLRPESALAQAQKCFALYRQAYTGNNSSQIQAAMKGFEEVIKKF 473

Query: 242 SNVVEACTLFAQVLVDQEDFDGAEEYFNRSIRVDPENASLYVHRAMLMLQARGNVDEAIK 301
               E   L+AQ L DQ+ F  A+E +++ I ++P+NA+ YVH+ +L LQ + ++D+ ++
Sbjct: 474 PRCAEGYALYAQALTDQQQFGKADEMYDKCINLEPDNATTYVHKGLLQLQWKQDLDKGLE 533

Query: 302 LIEKAISIDKSCMFAYETLGTIEVQRGRLEEAVKCFNKALPLARDEAELSHIYSLRDAAI 361
           LI KAI ID  C FAYET+GTIEVQRG +E+A+  FNKA+ LA+ E E++H+YSL DAA 
Sbjct: 534 LISKAIEIDNKCDFAYETMGTIEVQRGNMEKAIDMFNKAINLAKSEMEMAHLYSLCDAAH 593

Query: 362 AQMKVCERYNIK 373
           AQ +V ++Y +K
Sbjct: 594 AQTEVAKKYGLK 605



 Score = 48.1 bits (113), Expect = 0.011,   Method: Compositional matrix adjust.
 Identities = 23/56 (41%), Positives = 33/56 (58%)

Query: 471 DLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQRHFV 526
           D + A  +DP  AD Y+ RGQ+  L  Q EEA+ + D+ I L P   +A+AQ+ F 
Sbjct: 390 DFNMAADIDPQNADVYHHRGQLKILLDQVEEAVADFDECIRLRPESALAQAQKCFA 445


>gi|242016404|ref|XP_002428811.1| mitochondrial protein import receptor, putative [Pediculus humanus
           corporis]
 gi|212513508|gb|EEB16073.1| mitochondrial protein import receptor, putative [Pediculus humanus
           corporis]
          Length = 568

 Score =  253 bits (645), Expect = 2e-64,   Method: Compositional matrix adjust.
 Identities = 144/360 (40%), Positives = 219/360 (60%), Gaps = 14/360 (3%)

Query: 6   GAQHAKEEISKRSFFKPSKQFIKTYLKSFPNDPILQPDGLSNGVELTNGDTNESHELDLL 65
           G QHAKE ++KR    PS+  IKTY  +F NDPI      ++ +  T+GD ++ +     
Sbjct: 202 GRQHAKEAMAKRVPVMPSEIVIKTYFSTFANDPI------NSFLSKTDGDNSKGY----- 250

Query: 66  SKAKRAFEHEDYLTAIRHCTEEIESTSSNHT-KALARLLRATVYIFTSQSTKAIEDLTQL 124
            KA   F++ +Y   I  CTEEI  T +    K  A +LRAT Y+FT ++  A+ DL  +
Sbjct: 251 LKAVECFKNRNYELVIPACTEEINFTEAEALFKNEALVLRATFYLFTGENHLALSDLDMV 310

Query: 125 VEDTSVDPKIKVNAHIKRAVVHLHAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLF 184
           + +     +IK NA IKRA +H+    DFT    D + A   D   +D Y+ RGQI  L 
Sbjct: 311 INNKEACARIKSNALIKRASIHMQL-EDFTACTNDFNFAVATDEENSDIYHHRGQINLLL 369

Query: 185 GQYEEALRNLDKTIALNPNFHVARAQRHFVVHKM-IVPGDRERVEQSLKEFRNFVDTHSN 243
            + +EA  + + ++ALNP   V+  Q+ F  ++M ++  D   +   +K+F + ++ + +
Sbjct: 370 EKVKEASEDFNLSVALNPKNPVSVVQKCFTDYRMALLNKDINSINNMMKKFDDILNEYPD 429

Query: 244 VVEACTLFAQVLVDQEDFDGAEEYFNRSIRVDPENASLYVHRAMLMLQARGNVDEAIKLI 303
             E   ++AQVL DQ++F  A+E   ++I+VDP NA+L V RAML+LQ   +++ A+K I
Sbjct: 430 CTECYAVYAQVLTDQQEFAKADELLQKAIKVDPNNAALLVRRAMLVLQWTADIETAVKYI 489

Query: 304 EKAISIDKSCMFAYETLGTIEVQRGRLEEAVKCFNKALPLARDEAELSHIYSLRDAAIAQ 363
           ++A+ ID+ C FAYETLGTIEVQRG L +A+K F+KA+ L + E E+SHI+SL+DAA AQ
Sbjct: 490 KEALEIDEKCEFAYETLGTIEVQRGNLVKAIKMFDKAIALTKTELEMSHIFSLKDAAKAQ 549



 Score = 40.4 bits (93), Expect = 2.4,   Method: Compositional matrix adjust.
 Identities = 22/62 (35%), Positives = 33/62 (53%)

Query: 464 DFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQR 523
           DFT    D + A   D   +D Y+ RGQI  L  + +EA  + + ++ALNP   V+  Q+
Sbjct: 337 DFTACTNDFNFAVATDEENSDIYHHRGQINLLLEKVKEASEDFNLSVALNPKNPVSVVQK 396

Query: 524 HF 525
            F
Sbjct: 397 CF 398


>gi|350397523|ref|XP_003484904.1| PREDICTED: mitochondrial import receptor subunit TOM70-like [Bombus
           impatiens]
          Length = 576

 Score =  253 bits (645), Expect = 3e-64,   Method: Compositional matrix adjust.
 Identities = 144/377 (38%), Positives = 213/377 (56%), Gaps = 19/377 (5%)

Query: 1   MFMDR-----GAQHAKEEISKRSFFKPSKQFIKTYLKSFPNDPILQPDGLSNGVELTNGD 55
           M  DR     G QHA E ++K+    PSK FIKTY+ +F  DP+               D
Sbjct: 199 MMADRVLKQLGRQHATEYLAKKKLIMPSKYFIKTYIITFHKDPVFS----------MLQD 248

Query: 56  TNESHELDLLSKAKRAFEHEDYLTAIRHCTEEIESTSSNHT--KALARLLRATVYIFTSQ 113
           T+ S      +KA +  + + Y   I  CTEEI S+  N    K    LLRAT Y+   Q
Sbjct: 249 TDYSDISPGFAKALQYIKEQKYEDIIPICTEEINSSDPNTLPHKMKVLLLRATFYMLLGQ 308

Query: 114 STKAIEDLTQLVEDTSVDPKIKVNAHIKRAVVHLHAASDFTKAFADLDEAEKVDPNVADS 173
              +IED   ++ + SV   IKVNA IKRA + +   +   K+F D + A  +DP   D 
Sbjct: 309 HDASIEDFGTIINNESVSKDIKVNALIKRATLFMQLENP-DKSFCDFETAAGLDPECGDV 367

Query: 174 YYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQRHFVVHKM-IVPGDRERVEQSLK 232
           Y+ RG +  +  + +EA  +  K +  NP+F V   Q+ +  ++  IV   +E +E+++K
Sbjct: 368 YHHRGHVNLIMEKIDEAREDFRKAVEFNPDFGVGYVQKCYADYRYGIVERSKEVIEEAMK 427

Query: 233 EFRNFVDTHSNVVEACTLFAQVLVDQEDFDGAEEYFNRSIRVDPENASLYVHRAMLMLQA 292
            F    +   N  E  TL+AQ+L + +++  A+ YF ++I  DP NA++YVHR +L LQ 
Sbjct: 428 NFEAAFEKFPNCSECYTLYAQMLTELQEYQKADTYFAKAIEKDPINATVYVHRGLLQLQW 487

Query: 293 RGNVDEAIKLIEKAISIDKSCMFAYETLGTIEVQRGRLEEAVKCFNKALPLARDEAELSH 352
            GNV++AI+ I KA+ +D  C + YETLGTIEVQRG +EEA+K F+KAL L R   EL+H
Sbjct: 488 HGNVEKAIEYINKALEMDDKCEYGYETLGTIEVQRGNVEEAIKLFDKALTLGRTAMELTH 547

Query: 353 IYSLRDAAIAQMKVCER 369
           I+SL++AA  ++ + ER
Sbjct: 548 IFSLKNAAKTRLTIKER 564



 Score = 44.7 bits (104), Expect = 0.13,   Method: Compositional matrix adjust.
 Identities = 18/59 (30%), Positives = 31/59 (52%)

Query: 467 KAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQRHF 525
           K+F D + A  +DP   D Y+ RG +  +  + +EA  +  K +  NP+F V   Q+ +
Sbjct: 349 KSFCDFETAAGLDPECGDVYHHRGHVNLIMEKIDEAREDFRKAVEFNPDFGVGYVQKCY 407


>gi|148235969|ref|NP_001083124.1| translocase of outer mitochondrial membrane 70 homolog A [Xenopus
           laevis]
 gi|37805291|gb|AAH59994.1| MGC68780 protein [Xenopus laevis]
          Length = 576

 Score =  252 bits (644), Expect = 3e-64,   Method: Compositional matrix adjust.
 Identities = 140/375 (37%), Positives = 221/375 (58%), Gaps = 13/375 (3%)

Query: 6   GAQHAKEEISKRSFFKPSKQFIKTYLKSFPNDPILQPDGLSNGVELTNGDTNESHELDLL 65
           G + AK++   R    PS QFIK+Y  SF +D I QP  L  G E ++ D ++  E  ++
Sbjct: 204 GKEKAKDKYKNREPLMPSPQFIKSYFSSFTDDIISQP--LQKG-EKSDEDKDKEGEAAVV 260

Query: 66  S------KAKRAFEHEDYLTAIRHCTEEIESTSSNHTKALARLLRATVYIFTSQSTKAIE 119
                  KAK+  E E+Y   I  CT+E+ES      +AL  LLRAT Y+    +  A  
Sbjct: 261 KEKSGYLKAKKYMEEENYDKIISECTKEVESEGKYMAEAL--LLRATFYLLIGNAAAAKP 318

Query: 120 DLTQLVEDTSVDPKIKVNAHIKRAVVHLHAASDFTKAFADLDEAEKVDPNVADSYYQRGQ 179
           DL Q++     + K++ NA IKR  +++        +  D + A  +DP  AD Y+ RGQ
Sbjct: 319 DLDQVISMEECNVKLRANALIKRGSMYMQQQQPVL-STQDFNMAADIDPQNADVYHHRGQ 377

Query: 180 IYCLFGQYEEALRNLDKTIALNPNFHVARAQRHFVVHKMIVPGDRE-RVEQSLKEFRNFV 238
           +  L  Q EEA+ + D+ I L P+  +A+AQ+ F +++    G    +++++++ F + +
Sbjct: 378 LKILLDQVEEAVEDFDECIRLRPDSALAQAQKCFALYRKAYTGSNPIQIKEAMQGFEDVI 437

Query: 239 DTHSNVVEACTLFAQVLVDQEDFDGAEEYFNRSIRVDPENASLYVHRAMLMLQARGNVDE 298
                  E   L+AQ L DQ+ F  A+E +++ I ++P+NA+ YVH+ +L LQ + ++++
Sbjct: 438 IKFPKCAEGYALYAQALTDQQQFGKADEMYDKCIDLEPDNATTYVHKGLLQLQWKQDLEK 497

Query: 299 AIKLIEKAISIDKSCMFAYETLGTIEVQRGRLEEAVKCFNKALPLARDEAELSHIYSLRD 358
            + LI KAI ID  C FAYET+GTIEVQRG L++A++ FNKA+ LA+ E E++H+YSL D
Sbjct: 498 GLDLISKAIEIDNKCDFAYETMGTIEVQRGNLDKAIEMFNKAINLAKSEMEMAHLYSLCD 557

Query: 359 AAIAQMKVCERYNIK 373
           AA AQ +V  +Y +K
Sbjct: 558 AAYAQTEVARKYGLK 572



 Score = 49.3 bits (116), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 23/56 (41%), Positives = 34/56 (60%)

Query: 471 DLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQRHFV 526
           D + A  +DP  AD Y+ RGQ+  L  Q EEA+ + D+ I L P+  +A+AQ+ F 
Sbjct: 357 DFNMAADIDPQNADVYHHRGQLKILLDQVEEAVEDFDECIRLRPDSALAQAQKCFA 412


>gi|403306109|ref|XP_003943587.1| PREDICTED: mitochondrial import receptor subunit TOM70 [Saimiri
           boliviensis boliviensis]
          Length = 608

 Score =  252 bits (644), Expect = 3e-64,   Method: Compositional matrix adjust.
 Identities = 140/372 (37%), Positives = 216/372 (58%), Gaps = 7/372 (1%)

Query: 6   GAQHAKEEISKRSFFKPSKQFIKTYLKSFPNDPILQP---DGLSNGVELTNGDTNESHEL 62
           G + AKE+   R    PS QFIK+Y  SF +D I QP      S+  +   G+  E  E 
Sbjct: 236 GKEKAKEKYKNREPLMPSPQFIKSYFSSFTDDIISQPMLKGEKSDEDKDKEGEALEVKEN 295

Query: 63  DLLSKAKRAFEHEDYLTAIRHCTEEIESTSSNHTKALARLLRATVYIFTSQSTKAIEDLT 122
               KAK+  E E+Y   I  C++EI+S      +AL  LLRAT Y+    +  A  DL 
Sbjct: 296 SGYLKAKQYMEEENYDKIISECSKEIDSEGKYMAEAL--LLRATFYLLIGNANAAKPDLD 353

Query: 123 QLVEDTSVDPKIKVNAHIKRAVVHLHAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYC 182
           +++     + K++ NA IKR  +++        +  D + A  +DP  AD Y+ RGQ+  
Sbjct: 354 KVISLKEANVKLRANALIKRGSMYMQQQQPLL-STQDFNMAADIDPQNADVYHHRGQLKI 412

Query: 183 LFGQYEEALRNLDKTIALNPNFHVARAQRHFVVHKMIVPGDRE-RVEQSLKEFRNFVDTH 241
           L  Q EEA+ + D+ I L P   +A+AQ+ F +++    G+   +++ ++K F   +   
Sbjct: 413 LLDQVEEAVADFDECIRLRPESALAQAQKCFALYRQAYTGNNSSQIQAAMKGFEEVIKKF 472

Query: 242 SNVVEACTLFAQVLVDQEDFDGAEEYFNRSIRVDPENASLYVHRAMLMLQARGNVDEAIK 301
               E   L+AQ L DQ+ F  A+E +++ I ++P+NA+ YVH+ +L LQ + ++D  ++
Sbjct: 473 PRCAEGYALYAQALTDQQQFGKADEMYDKCIDLEPDNATTYVHKGLLQLQWKQDLDRGLE 532

Query: 302 LIEKAISIDKSCMFAYETLGTIEVQRGRLEEAVKCFNKALPLARDEAELSHIYSLRDAAI 361
           LI KAI ID  C FAYET+GTIEVQRG +E+A+  FNKA+ LA+ E E++H+YSL DAA 
Sbjct: 533 LISKAIEIDNKCDFAYETMGTIEVQRGNMEKAIDMFNKAINLAKSEMEMAHLYSLCDAAH 592

Query: 362 AQMKVCERYNIK 373
           AQ++V ++Y +K
Sbjct: 593 AQIEVAKKYGLK 604



 Score = 48.1 bits (113), Expect = 0.011,   Method: Compositional matrix adjust.
 Identities = 23/56 (41%), Positives = 33/56 (58%)

Query: 471 DLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQRHFV 526
           D + A  +DP  AD Y+ RGQ+  L  Q EEA+ + D+ I L P   +A+AQ+ F 
Sbjct: 389 DFNMAADIDPQNADVYHHRGQLKILLDQVEEAVADFDECIRLRPESALAQAQKCFA 444


>gi|291400784|ref|XP_002716658.1| PREDICTED: translocase of outer mitochondrial membrane 70 homolog
           A, partial [Oryctolagus cuniculus]
          Length = 623

 Score =  252 bits (644), Expect = 3e-64,   Method: Compositional matrix adjust.
 Identities = 140/372 (37%), Positives = 218/372 (58%), Gaps = 7/372 (1%)

Query: 6   GAQHAKEEISKRSFFKPSKQFIKTYLKSFPNDPILQP---DGLSNGVELTNGDTNESHEL 62
           G + AKE+   R    PS QFIK+Y  SF +D I QP      S+  +   G+  E  E 
Sbjct: 251 GKEKAKEKYKNREPLMPSPQFIKSYFSSFTDDIISQPMLKGEKSDEDKDKEGEALEVKEN 310

Query: 63  DLLSKAKRAFEHEDYLTAIRHCTEEIESTSSNHTKALARLLRATVYIFTSQSTKAIEDLT 122
               KAK+  E E+Y   I  C++EI++      +AL  LLRAT Y+    ++ A  DL 
Sbjct: 311 SGYLKAKQYMEEENYDKIISECSKEIDAEGRFAAEAL--LLRATFYLLIGNASAAKPDLD 368

Query: 123 QLVEDTSVDPKIKVNAHIKRAVVHLHAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYC 182
           +++     + K++ NA IKR  +++        +  D + A  +DP  AD Y+ RGQ+  
Sbjct: 369 KVIGLKEANVKLRANALIKRGSMYMQQQQPLL-STQDFNMAADIDPQNADVYHHRGQLKI 427

Query: 183 LFGQYEEALRNLDKTIALNPNFHVARAQRHFVVHKMIVPGDRE-RVEQSLKEFRNFVDTH 241
           L  Q EEA+ + D+ I L P   +A+AQ+ F +++    G+   +++ ++K F   +   
Sbjct: 428 LLDQVEEAVADFDECIRLRPESALAQAQKCFALYRQAYTGNNSSQIQAAMKGFEEVIKKF 487

Query: 242 SNVVEACTLFAQVLVDQEDFDGAEEYFNRSIRVDPENASLYVHRAMLMLQARGNVDEAIK 301
           S   E   L+AQ L DQ+ F  A+E +++ I ++P+NA+ YVH+ +L LQ + ++D+ ++
Sbjct: 488 SRCAEGYALYAQALTDQQQFGKADEMYDKCIELEPDNATTYVHKGLLQLQWKQDLDKGLE 547

Query: 302 LIEKAISIDKSCMFAYETLGTIEVQRGRLEEAVKCFNKALPLARDEAELSHIYSLRDAAI 361
           LI KAI ID  C FAYET+GTIEVQRG +E+A+  FNKA+ LA+ E E++H+YSL DAA 
Sbjct: 548 LISKAIEIDNKCDFAYETMGTIEVQRGNMEKAIDMFNKAINLAKSEMEMAHLYSLCDAAH 607

Query: 362 AQMKVCERYNIK 373
           AQ +V ++Y +K
Sbjct: 608 AQTEVAKKYGLK 619



 Score = 48.1 bits (113), Expect = 0.010,   Method: Compositional matrix adjust.
 Identities = 23/56 (41%), Positives = 33/56 (58%)

Query: 471 DLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQRHFV 526
           D + A  +DP  AD Y+ RGQ+  L  Q EEA+ + D+ I L P   +A+AQ+ F 
Sbjct: 404 DFNMAADIDPQNADVYHHRGQLKILLDQVEEAVADFDECIRLRPESALAQAQKCFA 459


>gi|340715323|ref|XP_003396165.1| PREDICTED: mitochondrial import receptor subunit TOM70-like [Bombus
           terrestris]
          Length = 576

 Score =  252 bits (643), Expect = 4e-64,   Method: Compositional matrix adjust.
 Identities = 145/377 (38%), Positives = 210/377 (55%), Gaps = 19/377 (5%)

Query: 1   MFMDR-----GAQHAKEEISKRSFFKPSKQFIKTYLKSFPNDPILQPDGLSNGVELTNGD 55
           M  DR     G QHA E ++ +    PSK FIKTY+ +F  DP+               D
Sbjct: 199 MMADRVLKQLGRQHATEYLANKKLVMPSKYFIKTYIITFHKDPVFS----------MLQD 248

Query: 56  TNESHELDLLSKAKRAFEHEDYLTAIRHCTEEIESTSSNHT--KALARLLRATVYIFTSQ 113
           T+ S      +KA +  + + Y   I  CTEEI S+  N    K    LLRAT Y+   Q
Sbjct: 249 TDYSDISPGFAKALQCVKEQKYEDIIPICTEEINSSDPNTLPHKIKVLLLRATFYMLLGQ 308

Query: 114 STKAIEDLTQLVEDTSVDPKIKVNAHIKRAVVHLHAASDFTKAFADLDEAEKVDPNVADS 173
              +IED   ++ D SV   IKVN  IKRA + +   +   K F D + A  +DP   D 
Sbjct: 309 HDASIEDFETIINDESVSKDIKVNVLIKRATLFMQLENP-DKCFCDFETAAGLDPECGDV 367

Query: 174 YYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQRHFVVHKM-IVPGDRERVEQSLK 232
           Y+ RG +  +  +  EA  +  K +  NP+F V  AQ+ +  ++  IV   +E VE++++
Sbjct: 368 YHHRGHVNLIMEKIHEAREDFTKAVEFNPDFGVGYAQKCYADYRYGIVERSKEMVEEAMR 427

Query: 233 EFRNFVDTHSNVVEACTLFAQVLVDQEDFDGAEEYFNRSIRVDPENASLYVHRAMLMLQA 292
            F    +   N  E  TL+AQ+L + +++  A+ YF ++I  DP NA++YVHR +L LQ 
Sbjct: 428 NFEAAFEKFPNCSECYTLYAQMLTELQEYQKADTYFAKAIEKDPINATVYVHRGLLQLQW 487

Query: 293 RGNVDEAIKLIEKAISIDKSCMFAYETLGTIEVQRGRLEEAVKCFNKALPLARDEAELSH 352
            GNV++AI+ I KA+ +D  C + YETLGTIEVQRG +EEA+K F+KAL L R   EL+H
Sbjct: 488 HGNVEKAIEYINKALEMDDKCEYGYETLGTIEVQRGNVEEAIKLFDKALTLGRTAMELTH 547

Query: 353 IYSLRDAAIAQMKVCER 369
           I+SLR+AA  ++ + ER
Sbjct: 548 IFSLRNAAKTRLTLKER 564



 Score = 45.8 bits (107), Expect = 0.058,   Method: Compositional matrix adjust.
 Identities = 19/59 (32%), Positives = 30/59 (50%)

Query: 467 KAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQRHF 525
           K F D + A  +DP   D Y+ RG +  +  +  EA  +  K +  NP+F V  AQ+ +
Sbjct: 349 KCFCDFETAAGLDPECGDVYHHRGHVNLIMEKIHEAREDFTKAVEFNPDFGVGYAQKCY 407


>gi|296226401|ref|XP_002758910.1| PREDICTED: mitochondrial import receptor subunit TOM70 [Callithrix
           jacchus]
          Length = 608

 Score =  252 bits (643), Expect = 4e-64,   Method: Compositional matrix adjust.
 Identities = 140/372 (37%), Positives = 216/372 (58%), Gaps = 7/372 (1%)

Query: 6   GAQHAKEEISKRSFFKPSKQFIKTYLKSFPNDPILQP---DGLSNGVELTNGDTNESHEL 62
           G + AKE+   R    PS QFIK+Y  SF +D I QP      S+  +   G+  E  E 
Sbjct: 236 GKEKAKEKYKNREPLMPSPQFIKSYFSSFTDDIISQPMLKGEKSDEDKDKEGEALEVKEN 295

Query: 63  DLLSKAKRAFEHEDYLTAIRHCTEEIESTSSNHTKALARLLRATVYIFTSQSTKAIEDLT 122
               KAK+  E E+Y   I  C++EI+S      +AL  LLRAT Y+    +  A  DL 
Sbjct: 296 SGYLKAKQYMEEENYDKIISECSKEIDSEGKYMAEAL--LLRATFYLLIGNANAAKPDLD 353

Query: 123 QLVEDTSVDPKIKVNAHIKRAVVHLHAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYC 182
           +++     + K++ NA IKR  +++        +  D + A  +DP  AD Y+ RGQ+  
Sbjct: 354 KVISLKEANVKLRANALIKRGSMYMQQQQPLL-STQDFNMAADIDPQNADVYHHRGQLKI 412

Query: 183 LFGQYEEALRNLDKTIALNPNFHVARAQRHFVVHKMIVPGDRE-RVEQSLKEFRNFVDTH 241
           L  Q EEA+ + D+ I L P   +A+AQ+ F +++    G+   +++ ++K F   +   
Sbjct: 413 LLDQVEEAVADFDECIRLRPESALAQAQKCFALYRQAYTGNNSSQIQAAMKGFEEVIKKF 472

Query: 242 SNVVEACTLFAQVLVDQEDFDGAEEYFNRSIRVDPENASLYVHRAMLMLQARGNVDEAIK 301
               E   L+AQ L DQ+ F  A+E +++ I ++P+NA+ YVH+ +L LQ + ++D  ++
Sbjct: 473 PRCAEGYALYAQALTDQQQFGKADEMYDKCIDLEPDNATTYVHKGLLQLQWKQDLDRGLE 532

Query: 302 LIEKAISIDKSCMFAYETLGTIEVQRGRLEEAVKCFNKALPLARDEAELSHIYSLRDAAI 361
           LI KAI ID  C FAYET+GTIEVQRG +E+A+  FNKA+ LA+ E E++H+YSL DAA 
Sbjct: 533 LISKAIEIDNKCDFAYETMGTIEVQRGNMEKAIDMFNKAINLAKSEMEMAHLYSLCDAAH 592

Query: 362 AQMKVCERYNIK 373
           AQ++V ++Y +K
Sbjct: 593 AQIEVAKKYGLK 604



 Score = 48.1 bits (113), Expect = 0.012,   Method: Compositional matrix adjust.
 Identities = 23/56 (41%), Positives = 33/56 (58%)

Query: 471 DLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQRHFV 526
           D + A  +DP  AD Y+ RGQ+  L  Q EEA+ + D+ I L P   +A+AQ+ F 
Sbjct: 389 DFNMAADIDPQNADVYHHRGQLKILLDQVEEAVADFDECIRLRPESALAQAQKCFA 444


>gi|335775041|gb|AEH58439.1| mitochondrial import receptor subunit TOM7-like protein, partial
           [Equus caballus]
          Length = 416

 Score =  251 bits (642), Expect = 5e-64,   Method: Compositional matrix adjust.
 Identities = 139/372 (37%), Positives = 216/372 (58%), Gaps = 7/372 (1%)

Query: 6   GAQHAKEEISKRSFFKPSKQFIKTYLKSFPNDPILQP---DGLSNGVELTNGDTNESHEL 62
           G + AKE+   R    PS QFIK+Y  SF +D I QP      S+  +   G+  E  E 
Sbjct: 44  GKEKAKEKYKNREPLMPSPQFIKSYFSSFTDDIISQPMLKGEKSDEDKDKEGEALEVKEN 103

Query: 63  DLLSKAKRAFEHEDYLTAIRHCTEEIESTSSNHTKALARLLRATVYIFTSQSTKAIEDLT 122
               KAK+  E E+Y   I  C++E+++      +AL  LLRAT Y+    +T A  DL 
Sbjct: 104 SGYLKAKQYMEEENYDKIISECSKEVDAQGKYMAEAL--LLRATFYLLIGNATAAKPDLD 161

Query: 123 QLVEDTSVDPKIKVNAHIKRAVVHLHAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYC 182
           +++     + K++ NA IKR  +++        +  D + A  +DP  AD Y+ RGQ+  
Sbjct: 162 KVISLKDANVKLRANALIKRGSMYMQQQQPLL-STQDFNMAADIDPQNADVYHHRGQLKI 220

Query: 183 LFGQYEEALRNLDKTIALNPNFHVARAQRHFVVHKMIVPGDRE-RVEQSLKEFRNFVDTH 241
           L  Q EEA+ + D+ I L P   +A+AQ+ F +++    G+   +++ ++K F   +   
Sbjct: 221 LLDQVEEAVADFDECIRLRPESALAQAQKCFALYRQAYTGNNSSQIQAAMKGFEEVIKKF 280

Query: 242 SNVVEACTLFAQVLVDQEDFDGAEEYFNRSIRVDPENASLYVHRAMLMLQARGNVDEAIK 301
               E   L+AQ L DQ+ F  A+E +++ I ++P+NA+ YVH+ +L LQ + ++D  ++
Sbjct: 281 PRCAEGYALYAQALTDQQQFGKADEMYDKCIDLEPDNATTYVHKGLLQLQWKQDLDRGLE 340

Query: 302 LIEKAISIDKSCMFAYETLGTIEVQRGRLEEAVKCFNKALPLARDEAELSHIYSLRDAAI 361
           LI KAI ID  C FAYET+GTIEVQRG +E+A+  FNKA+ LA+ E E++H+YSL DAA 
Sbjct: 341 LISKAIEIDNKCDFAYETMGTIEVQRGNMEKAIDMFNKAINLAKSEMEMAHLYSLCDAAH 400

Query: 362 AQMKVCERYNIK 373
           AQ +V ++Y +K
Sbjct: 401 AQTEVAKKYGLK 412



 Score = 48.5 bits (114), Expect = 0.009,   Method: Compositional matrix adjust.
 Identities = 23/56 (41%), Positives = 33/56 (58%)

Query: 471 DLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQRHFV 526
           D + A  +DP  AD Y+ RGQ+  L  Q EEA+ + D+ I L P   +A+AQ+ F 
Sbjct: 197 DFNMAADIDPQNADVYHHRGQLKILLDQVEEAVADFDECIRLRPESALAQAQKCFA 252


>gi|115496634|ref|NP_001068796.1| mitochondrial import receptor subunit TOM70 [Bos taurus]
 gi|115305042|gb|AAI23445.1| Translocase of outer mitochondrial membrane 70 homolog A (S.
           cerevisiae) [Bos taurus]
 gi|296491553|tpg|DAA33596.1| TPA: translocase of outer mitochondrial membrane 70 homolog A [Bos
           taurus]
 gi|300675571|gb|ADK26451.1| translocase of outer mitochondrial membrane 70 [Bos taurus]
          Length = 609

 Score =  251 bits (642), Expect = 6e-64,   Method: Compositional matrix adjust.
 Identities = 139/372 (37%), Positives = 216/372 (58%), Gaps = 7/372 (1%)

Query: 6   GAQHAKEEISKRSFFKPSKQFIKTYLKSFPNDPILQP---DGLSNGVELTNGDTNESHEL 62
           G + AKE+   R    PS QFIK+Y  SF +D I QP      S+  +   G+  E  E 
Sbjct: 237 GKEKAKEKYKNREPLMPSPQFIKSYFSSFTDDIISQPMLKGEKSDEDKDKEGEALEVKEN 296

Query: 63  DLLSKAKRAFEHEDYLTAIRHCTEEIESTSSNHTKALARLLRATVYIFTSQSTKAIEDLT 122
               KAK+  E E+Y   I  C++EI++      +AL  LLRAT Y+    +  A  DL 
Sbjct: 297 SGYLKAKQYMEEENYDKIISECSKEIDAQGKYMAEAL--LLRATFYLLIGNANAAKPDLD 354

Query: 123 QLVEDTSVDPKIKVNAHIKRAVVHLHAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYC 182
           +++     + K++ NA IKR  +++        +  D + A  +DP  AD Y+ RGQ+  
Sbjct: 355 KVISLQEANVKLRANALIKRGSMYMQQQQPLL-STQDFNMAADIDPQNADVYHHRGQLKI 413

Query: 183 LFGQYEEALRNLDKTIALNPNFHVARAQRHFVVHKMIVPGDRE-RVEQSLKEFRNFVDTH 241
           L  Q EEA+ + D+ I L P   +A+AQ+ F +++    G+   +++ ++K F   +   
Sbjct: 414 LLDQVEEAVADFDECIRLRPESALAQAQKCFALYRQAYTGNNSSQIQAAMKGFEEVIKKF 473

Query: 242 SNVVEACTLFAQVLVDQEDFDGAEEYFNRSIRVDPENASLYVHRAMLMLQARGNVDEAIK 301
               E   L+AQ L DQ+ F  A+E +++ I ++P+NA+ YVH+ +L LQ + ++D+ ++
Sbjct: 474 PRCAEGYALYAQALTDQQQFGKADEMYDKCINLEPDNATTYVHKGLLQLQWKQDLDKGLE 533

Query: 302 LIEKAISIDKSCMFAYETLGTIEVQRGRLEEAVKCFNKALPLARDEAELSHIYSLRDAAI 361
           LI KAI ID  C FAYET+GTIEVQRG +E+A+  FNKA+ LA+ E E++H+YSL DAA 
Sbjct: 534 LISKAIEIDNKCDFAYETMGTIEVQRGNMEKAIDMFNKAINLAKSEMEMAHLYSLCDAAH 593

Query: 362 AQMKVCERYNIK 373
           AQ +V ++Y +K
Sbjct: 594 AQTEVAKKYGLK 605



 Score = 48.1 bits (113), Expect = 0.010,   Method: Compositional matrix adjust.
 Identities = 23/56 (41%), Positives = 33/56 (58%)

Query: 471 DLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQRHFV 526
           D + A  +DP  AD Y+ RGQ+  L  Q EEA+ + D+ I L P   +A+AQ+ F 
Sbjct: 390 DFNMAADIDPQNADVYHHRGQLKILLDQVEEAVADFDECIRLRPESALAQAQKCFA 445


>gi|440910700|gb|ELR60464.1| Mitochondrial import receptor subunit TOM70 [Bos grunniens mutus]
          Length = 609

 Score =  251 bits (641), Expect = 7e-64,   Method: Compositional matrix adjust.
 Identities = 139/372 (37%), Positives = 216/372 (58%), Gaps = 7/372 (1%)

Query: 6   GAQHAKEEISKRSFFKPSKQFIKTYLKSFPNDPILQP---DGLSNGVELTNGDTNESHEL 62
           G + AKE+   R    PS QFIK+Y  SF +D I QP      S+  +   G+  E  E 
Sbjct: 237 GKEKAKEKYKNREPLMPSPQFIKSYFSSFTDDIISQPMLKGEKSDEDKDKEGEALEVKEN 296

Query: 63  DLLSKAKRAFEHEDYLTAIRHCTEEIESTSSNHTKALARLLRATVYIFTSQSTKAIEDLT 122
               KAK+  E E+Y   I  C++EI++      +AL  LLRAT Y+    +  A  DL 
Sbjct: 297 SGYLKAKQYMEEENYDKIISECSKEIDAQGKYMAEAL--LLRATFYLLIGNANAAKPDLD 354

Query: 123 QLVEDTSVDPKIKVNAHIKRAVVHLHAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYC 182
           +++     + K++ NA IKR  +++        +  D + A  +DP  AD Y+ RGQ+  
Sbjct: 355 KVISLQEANVKLRANALIKRGSMYMQQQQPLL-STQDFNMAADIDPQNADVYHHRGQLKI 413

Query: 183 LFGQYEEALRNLDKTIALNPNFHVARAQRHFVVHKMIVPGDRE-RVEQSLKEFRNFVDTH 241
           L  Q EEA+ + D+ I L P   +A+AQ+ F +++    G+   +++ ++K F   +   
Sbjct: 414 LLDQVEEAVADFDECIRLRPESALAQAQKCFALYRQAYTGNNSSQIQAAMKGFEEVIKKF 473

Query: 242 SNVVEACTLFAQVLVDQEDFDGAEEYFNRSIRVDPENASLYVHRAMLMLQARGNVDEAIK 301
               E   L+AQ L DQ+ F  A+E +++ I ++P+NA+ YVH+ +L LQ + ++D+ ++
Sbjct: 474 PRCAEGYALYAQALTDQQQFGKADEMYDKCINLEPDNATTYVHKGLLQLQWKQDLDKGLE 533

Query: 302 LIEKAISIDKSCMFAYETLGTIEVQRGRLEEAVKCFNKALPLARDEAELSHIYSLRDAAI 361
           LI KAI ID  C FAYET+GTIEVQRG +E+A+  FNKA+ LA+ E E++H+YSL DAA 
Sbjct: 534 LISKAIEIDNKCDFAYETMGTIEVQRGNMEKAIDMFNKAINLAKSEMEMAHLYSLCDAAH 593

Query: 362 AQMKVCERYNIK 373
           AQ +V ++Y +K
Sbjct: 594 AQTEVAKKYGLK 605



 Score = 48.1 bits (113), Expect = 0.011,   Method: Compositional matrix adjust.
 Identities = 23/56 (41%), Positives = 33/56 (58%)

Query: 471 DLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQRHFV 526
           D + A  +DP  AD Y+ RGQ+  L  Q EEA+ + D+ I L P   +A+AQ+ F 
Sbjct: 390 DFNMAADIDPQNADVYHHRGQLKILLDQVEEAVADFDECIRLRPESALAQAQKCFA 445


>gi|338716112|ref|XP_001917360.2| PREDICTED: LOW QUALITY PROTEIN: mitochondrial import receptor
           subunit TOM70-like [Equus caballus]
          Length = 662

 Score =  251 bits (640), Expect = 8e-64,   Method: Compositional matrix adjust.
 Identities = 139/372 (37%), Positives = 216/372 (58%), Gaps = 7/372 (1%)

Query: 6   GAQHAKEEISKRSFFKPSKQFIKTYLKSFPNDPILQP---DGLSNGVELTNGDTNESHEL 62
           G + AKE+   R    PS QFIK+Y  SF +D I QP      S+  +   G+  E  E 
Sbjct: 290 GKEKAKEKYKNREPLMPSPQFIKSYFSSFTDDIISQPMLKGEKSDEDKDKEGEALEVKEN 349

Query: 63  DLLSKAKRAFEHEDYLTAIRHCTEEIESTSSNHTKALARLLRATVYIFTSQSTKAIEDLT 122
               KAK+  E E+Y   I  C++E+++      +AL  LLRAT Y+    +T A  DL 
Sbjct: 350 SGYLKAKQYMEEENYDKIISECSKEVDAQGKYMAEAL--LLRATFYLLIGNATAAKPDLD 407

Query: 123 QLVEDTSVDPKIKVNAHIKRAVVHLHAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYC 182
           +++     + K++ NA IKR  +++        +  D + A  +DP  AD Y+ RGQ+  
Sbjct: 408 KVISLKDANVKLRANALIKRGSMYMQQQQPLL-STQDFNMAADIDPQNADVYHHRGQLKI 466

Query: 183 LFGQYEEALRNLDKTIALNPNFHVARAQRHFVVHKMIVPGDRE-RVEQSLKEFRNFVDTH 241
           L  Q EEA+ + D+ I L P   +A+AQ+ F +++    G+   +++ ++K F   +   
Sbjct: 467 LLDQVEEAVADFDECIRLRPESALAQAQKCFALYRQAYTGNNSSQIQAAMKGFEEVIKKF 526

Query: 242 SNVVEACTLFAQVLVDQEDFDGAEEYFNRSIRVDPENASLYVHRAMLMLQARGNVDEAIK 301
               E   L+AQ L DQ+ F  A+E +++ I ++P+NA+ YVH+ +L LQ + ++D  ++
Sbjct: 527 PRCAEGYALYAQALTDQQQFGKADEMYDKCIDLEPDNATTYVHKGLLQLQWKQDLDRGLE 586

Query: 302 LIEKAISIDKSCMFAYETLGTIEVQRGRLEEAVKCFNKALPLARDEAELSHIYSLRDAAI 361
           LI KAI ID  C FAYET+GTIEVQRG +E+A+  FNKA+ LA+ E E++H+YSL DAA 
Sbjct: 587 LISKAIEIDNKCDFAYETMGTIEVQRGNMEKAIDMFNKAINLAKSEMEMAHLYSLCDAAH 646

Query: 362 AQMKVCERYNIK 373
           AQ +V ++Y +K
Sbjct: 647 AQTEVAKKYGLK 658



 Score = 48.5 bits (114), Expect = 0.010,   Method: Compositional matrix adjust.
 Identities = 23/56 (41%), Positives = 33/56 (58%)

Query: 471 DLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQRHFV 526
           D + A  +DP  AD Y+ RGQ+  L  Q EEA+ + D+ I L P   +A+AQ+ F 
Sbjct: 443 DFNMAADIDPQNADVYHHRGQLKILLDQVEEAVADFDECIRLRPESALAQAQKCFA 498


>gi|224587408|gb|ACN58659.1| Mitochondrial precursor proteins import receptor [Salmo salar]
          Length = 563

 Score =  251 bits (640), Expect = 9e-64,   Method: Compositional matrix adjust.
 Identities = 142/374 (37%), Positives = 215/374 (57%), Gaps = 11/374 (2%)

Query: 6   GAQHAKEEISKRSFFKPSKQFIKTYLKSFPNDPILQPDGLSNGVELTNGDTNESHELDLL 65
           G + AK++   R    PS QFIK+Y  SF +D I QP  L  G +      NE    ++ 
Sbjct: 191 GKEKAKDQYKNRDLLMPSPQFIKSYFSSFTDDIISQP--LQKGEKKDEDKDNEGEAAEVT 248

Query: 66  S-----KAKRAFEHEDYLTAIRHCTEEIESTSSNHTKALARLLRATVYIFTSQSTKAIED 120
                 KAK+  E E+Y   I  CT+E+ES      +AL  LLRAT Y+    +T A  D
Sbjct: 249 ESSGYLKAKQYMEEENYDKIISECTKEVESEGRYTAEAL--LLRATFYLLIGNATGAQPD 306

Query: 121 LTQLVEDTSVDPKIKVNAHIKRAVVHLHAASDFTKAFADLDEAEKVDPNVADSYYQRGQI 180
           L +++     + K++ NA IKR  +++        +  D + A ++D   AD Y+ RGQ+
Sbjct: 307 LDRVINMEDANVKLRANALIKRGSMYMQQQQ-PMMSTQDFNMAAEIDTRNADVYHHRGQL 365

Query: 181 YCLFGQYEEALRNLDKTIALNPNFHVARAQRHFVVHKMIVPGDRE-RVEQSLKEFRNFVD 239
             L  Q EEA+ + D+ I L P+  +A+AQ+ F +++    G+ + +V+ ++  F +   
Sbjct: 366 KILLDQVEEAVGDFDECILLRPDSALAQAQKCFALYRQAYTGNSQSQVQTAMDGFEDITR 425

Query: 240 THSNVVEACTLFAQVLVDQEDFDGAEEYFNRSIRVDPENASLYVHRAMLMLQARGNVDEA 299
                 E   L+AQ L DQ+ F  A+E +N+ I ++P+NA+ YVH+ +L LQ + ++D  
Sbjct: 426 RFPKCAEGYALYAQALTDQQQFGKADEMYNKCIDLEPDNATTYVHKGLLQLQWKQDLDLG 485

Query: 300 IKLIEKAISIDKSCMFAYETLGTIEVQRGRLEEAVKCFNKALPLARDEAELSHIYSLRDA 359
           + LI KAI ID  C FAYET+GTIEVQRG LE+A+  FNKA+ LA+ E E++H+YSL DA
Sbjct: 486 LDLISKAIEIDNKCDFAYETMGTIEVQRGNLEKAIDMFNKAINLAKSEMEMAHLYSLCDA 545

Query: 360 AIAQMKVCERYNIK 373
           A AQ +V  +Y +K
Sbjct: 546 AYAQTEVARKYGLK 559



 Score = 45.4 bits (106), Expect = 0.078,   Method: Compositional matrix adjust.
 Identities = 22/56 (39%), Positives = 34/56 (60%)

Query: 471 DLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQRHFV 526
           D + A ++D   AD Y+ RGQ+  L  Q EEA+ + D+ I L P+  +A+AQ+ F 
Sbjct: 344 DFNMAAEIDTRNADVYHHRGQLKILLDQVEEAVGDFDECILLRPDSALAQAQKCFA 399


>gi|321470550|gb|EFX81526.1| hypothetical protein DAPPUDRAFT_303463 [Daphnia pulex]
          Length = 611

 Score =  251 bits (640), Expect = 1e-63,   Method: Compositional matrix adjust.
 Identities = 144/384 (37%), Positives = 215/384 (55%), Gaps = 19/384 (4%)

Query: 1   MFMDRGAQHAKEEISKRSFFKPSKQFIKTYLKSFPNDPILQPDGLSNGV----------- 49
           +  D G +HAKE +  R    PSK  + T++ SF  DP+       N +           
Sbjct: 216 VLKDLGKEHAKEAMLNRQSVIPSKHSVNTFMCSFAEDPVFNLLKQDNTMVKANRIIHLVS 275

Query: 50  -----ELTNGDTNESHELDLLSKAKRAFEHEDYLTAIRHCTEEIESTSSNHT-KALARLL 103
                 L +       E    +KA      +++   I  CT E+ES + + T K LARLL
Sbjct: 276 FPLICNLISQQAETDEEKSYFAKALDKLREKEFDPIIELCTNELESEAGDITIKRLARLL 335

Query: 104 RATVYIFTSQSTKAIEDLTQLVEDTSVDPKIKVNAHIKRAVVHLHAASDFTKAFADLDEA 163
           R T      +  KA++D + +  D   DPK++VNA +KRA + +   S   ++  DL  A
Sbjct: 336 RGTFLSLLGEHEKALDDFSAVFNDPETDPKVRVNALVKRATLRMQLGSP-EESLHDLLMA 394

Query: 164 EKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQRHFVVHKMIVP-G 222
            ++ P  AD ++ RGQ+Y L  Q  EA+ +  K ++LN +F +A  Q+ +  ++  V   
Sbjct: 395 AELGPENADVFHHRGQVYMLLDQASEAMSDFAKAVSLNGDFPIALVQKLYTDYRAAVAMS 454

Query: 223 DRERVEQSLKEFRNFVDTHSNVVEACTLFAQVLVDQEDFDGAEEYFNRSIRVDPENASLY 282
           +   V  SL  F + +       E   L+AQVL DQ++F  A+E F +++ VDP NA+ Y
Sbjct: 455 NAGEVVASLAAFEDAIRRFPTCPECFLLYAQVLSDQQEFVKADELFMKALEVDPHNATAY 514

Query: 283 VHRAMLMLQARGNVDEAIKLIEKAISIDKSCMFAYETLGTIEVQRGRLEEAVKCFNKALP 342
           VHR +L LQ+ GNV+ A K IE+AI +D  C FAYETLGTIEVQRG L  A++ F+KA+P
Sbjct: 515 VHRGLLQLQSTGNVELATKHIEEAIRMDDKCEFAYETLGTIEVQRGNLRRAIELFDKAIP 574

Query: 343 LARDEAELSHIYSLRDAAIAQMKV 366
           L++ EAE+SH++SL+DAA+AQ+KV
Sbjct: 575 LSKTEAEVSHLFSLKDAALAQLKV 598



 Score = 45.1 bits (105), Expect = 0.099,   Method: Compositional matrix adjust.
 Identities = 20/55 (36%), Positives = 33/55 (60%)

Query: 471 DLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQRHF 525
           DL  A ++ P  AD ++ RGQ+Y L  Q  EA+ +  K ++LN +F +A  Q+ +
Sbjct: 390 DLLMAAELGPENADVFHHRGQVYMLLDQASEAMSDFAKAVSLNGDFPIALVQKLY 444


>gi|387019333|gb|AFJ51784.1| Mitochondrial import receptor subunit TOM70 [Crotalus adamanteus]
          Length = 588

 Score =  250 bits (639), Expect = 1e-63,   Method: Compositional matrix adjust.
 Identities = 139/375 (37%), Positives = 220/375 (58%), Gaps = 13/375 (3%)

Query: 6   GAQHAKEEISKRSFFKPSKQFIKTYLKSFPNDPILQPDGLSNGVELTNGDTNESHELDLL 65
           G + AKE+   R    PS QFIK+Y  SF +D I QP       E ++ D ++  E  ++
Sbjct: 216 GKEKAKEKYKNREPLMPSPQFIKSYFSSFTDDIISQPLLRE---EKSDEDKDKEGEASII 272

Query: 66  S------KAKRAFEHEDYLTAIRHCTEEIESTSSNHTKALARLLRATVYIFTSQSTKAIE 119
                  KAK+  E E+Y   I  CT+EIE+      +AL  LLRAT Y+    +  A  
Sbjct: 273 KENCGYLKAKKYMEEENYDKIISECTKEIEAKGKYMAEAL--LLRATFYLLIGNANAAKP 330

Query: 120 DLTQLVEDTSVDPKIKVNAHIKRAVVHLHAASDFTKAFADLDEAEKVDPNVADSYYQRGQ 179
           DL Q++     + K++ NA IKR  +++        +  D + A   DP  +D Y+ RGQ
Sbjct: 331 DLNQVIVMEDANVKLRANALIKRGSMYMQQQQPLL-STQDFNMAADNDPQNSDVYHHRGQ 389

Query: 180 IYCLFGQYEEALRNLDKTIALNPNFHVARAQRHFVVHKMIVPGDR-ERVEQSLKEFRNFV 238
           +  L  + EEA+ + D+ I L P+  +A+AQ+ F +++    G+   +V+ ++K F + +
Sbjct: 390 LKILLDRVEEAVEDFDECIRLRPDSALAQAQKCFALYRQAYTGNNTSQVQAAMKGFEDVI 449

Query: 239 DTHSNVVEACTLFAQVLVDQEDFDGAEEYFNRSIRVDPENASLYVHRAMLMLQARGNVDE 298
                  E   L+AQ L DQ+ F  A++ +++ I ++P+NA+ YVH+ +L LQ + ++D+
Sbjct: 450 KKFPKCAEGYALYAQALTDQQQFGKADDMYDKCIDLEPDNATTYVHKGLLQLQWKQDLDK 509

Query: 299 AIKLIEKAISIDKSCMFAYETLGTIEVQRGRLEEAVKCFNKALPLARDEAELSHIYSLRD 358
            ++LI KAI ID  C FAYET+GTIEVQRG L++A++ FNKA+ LA+ E E++H+YSL D
Sbjct: 510 GLELISKAIEIDNKCDFAYETMGTIEVQRGNLDKAIEMFNKAINLAKSEMEMAHLYSLCD 569

Query: 359 AAIAQMKVCERYNIK 373
           AA AQ +V ++Y +K
Sbjct: 570 AAYAQTEVAKKYGLK 584



 Score = 43.9 bits (102), Expect = 0.23,   Method: Compositional matrix adjust.
 Identities = 21/56 (37%), Positives = 33/56 (58%)

Query: 471 DLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQRHFV 526
           D + A   DP  +D Y+ RGQ+  L  + EEA+ + D+ I L P+  +A+AQ+ F 
Sbjct: 369 DFNMAADNDPQNSDVYHHRGQLKILLDRVEEAVEDFDECIRLRPDSALAQAQKCFA 424


>gi|431901666|gb|ELK08543.1| Mitochondrial import receptor subunit TOM70 [Pteropus alecto]
          Length = 609

 Score =  250 bits (639), Expect = 1e-63,   Method: Compositional matrix adjust.
 Identities = 139/372 (37%), Positives = 215/372 (57%), Gaps = 7/372 (1%)

Query: 6   GAQHAKEEISKRSFFKPSKQFIKTYLKSFPNDPILQP---DGLSNGVELTNGDTNESHEL 62
           G + AKE+   R    PS QFIK+Y  SF +D I QP      S+  +   G+  E  E 
Sbjct: 237 GKEKAKEKYKNREPLMPSPQFIKSYFSSFTDDIISQPMLKGEKSDEDKDKEGEALEVKEN 296

Query: 63  DLLSKAKRAFEHEDYLTAIRHCTEEIESTSSNHTKALARLLRATVYIFTSQSTKAIEDLT 122
               KAK+  E E+Y   I  C++EI++      +AL  LLRAT Y+    +  A  DL 
Sbjct: 297 SGYLKAKQYMEEENYDKIISECSKEIDAQGKYMAEAL--LLRATFYLLIGNANAAKPDLD 354

Query: 123 QLVEDTSVDPKIKVNAHIKRAVVHLHAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYC 182
           +++     + K++ NA IKR  +++        +  D + A  +DP  AD Y+ RGQ+  
Sbjct: 355 KVISLKDANVKLRANALIKRGSMYMQQQQPLL-STQDFNMAADIDPQNADVYHHRGQLKI 413

Query: 183 LFGQYEEALRNLDKTIALNPNFHVARAQRHFVVHKMIVPGDRE-RVEQSLKEFRNFVDTH 241
           L  Q EEA+ + D+ I L P   +A+AQ+ F +++    G+   +++ ++K F   +   
Sbjct: 414 LLDQVEEAVADFDECIRLRPESALAQAQKCFALYRQAYTGNNSSQIQAAMKGFEEVIKKF 473

Query: 242 SNVVEACTLFAQVLVDQEDFDGAEEYFNRSIRVDPENASLYVHRAMLMLQARGNVDEAIK 301
               E   L+AQ L DQ+ F  A+E +++ I ++P+NA+ YVH+ +L LQ + ++D  ++
Sbjct: 474 PKCAEGYALYAQALTDQQQFGKADEMYDKCIDLEPDNATTYVHKGLLQLQWKQDLDRGLE 533

Query: 302 LIEKAISIDKSCMFAYETLGTIEVQRGRLEEAVKCFNKALPLARDEAELSHIYSLRDAAI 361
           LI KAI ID  C FAYET+GTIEVQRG +E+A+  FNKA+ LA+ E E++H+YSL DAA 
Sbjct: 534 LISKAIEIDNKCDFAYETMGTIEVQRGNMEKAIDMFNKAINLAKSEMEMAHLYSLCDAAH 593

Query: 362 AQMKVCERYNIK 373
           AQ +V ++Y +K
Sbjct: 594 AQTEVAKKYGLK 605



 Score = 48.1 bits (113), Expect = 0.010,   Method: Compositional matrix adjust.
 Identities = 23/56 (41%), Positives = 33/56 (58%)

Query: 471 DLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQRHFV 526
           D + A  +DP  AD Y+ RGQ+  L  Q EEA+ + D+ I L P   +A+AQ+ F 
Sbjct: 390 DFNMAADIDPQNADVYHHRGQLKILLDQVEEAVADFDECIRLRPESALAQAQKCFA 445


>gi|410920818|ref|XP_003973880.1| PREDICTED: mitochondrial import receptor subunit TOM70-like
           [Takifugu rubripes]
          Length = 610

 Score =  250 bits (639), Expect = 1e-63,   Method: Compositional matrix adjust.
 Identities = 139/374 (37%), Positives = 218/374 (58%), Gaps = 11/374 (2%)

Query: 6   GAQHAKEEISKRSFFKPSKQFIKTYLKSFPNDPILQPDGLSNGVELTNGDTNESHELDLL 65
           G + AKE+   R    PS QFIK+Y  SF +D I +P  L  G +      NE    ++ 
Sbjct: 238 GKEKAKEKYKNREPMMPSPQFIKSYFSSFTDDIISKP--LQKGEKKDEDKDNEGEAAEVT 295

Query: 66  S-----KAKRAFEHEDYLTAIRHCTEEIESTSSNHTKALARLLRATVYIFTSQSTKAIED 120
                 KAK+  E E+Y   I  CT+EI+S      ++L  LLRAT Y+    +T A  D
Sbjct: 296 ERSGYLKAKQYMEEENYDKIISECTKEIDSAGRYMGESL--LLRATFYLLIGNATAAQPD 353

Query: 121 LTQLVEDTSVDPKIKVNAHIKRAVVHLHAASDFTKAFADLDEAEKVDPNVADSYYQRGQI 180
           L +++     + K++ NA IKR  +++        +  D + A ++DP   D ++ RGQ+
Sbjct: 354 LDRVINMPHANVKLRANALIKRGSMYMQQQQPML-STQDFNMAAEIDPGNPDVFHHRGQL 412

Query: 181 YCLFGQYEEALRNLDKTIALNPNFHVARAQRHFVVHKMIVPGDRE-RVEQSLKEFRNFVD 239
             L  Q +EA+ + D+ I L P+  +A+AQ+ F +++    G+ + +V+ ++  F++ + 
Sbjct: 413 KILLDQVDEAVGDFDECIRLRPDSALAQAQKCFALYRQAYTGNNQSQVQIAIDGFQDVIR 472

Query: 240 THSNVVEACTLFAQVLVDQEDFDGAEEYFNRSIRVDPENASLYVHRAMLMLQARGNVDEA 299
                 E   L+AQ L DQ+ F  A+E ++R I ++P+NA+ YVH+ +L LQ R ++D  
Sbjct: 473 RFPQCAEGYALYAQALTDQQQFGKADEMYDRCIELEPDNATTYVHKGLLQLQWRQDLDVG 532

Query: 300 IKLIEKAISIDKSCMFAYETLGTIEVQRGRLEEAVKCFNKALPLARDEAELSHIYSLRDA 359
           + LI KAI ID  C FAYET+GTIEVQRG L++A++ FNKA+ LA+ E E++H+YSL DA
Sbjct: 533 LDLINKAIEIDNKCDFAYETMGTIEVQRGNLDKAIEMFNKAINLAKSEMEMAHLYSLCDA 592

Query: 360 AIAQMKVCERYNIK 373
           A AQ +V  +Y +K
Sbjct: 593 AYAQTEVARKYGLK 606



 Score = 44.7 bits (104), Expect = 0.13,   Method: Compositional matrix adjust.
 Identities = 20/56 (35%), Positives = 34/56 (60%)

Query: 471 DLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQRHFV 526
           D + A ++DP   D ++ RGQ+  L  Q +EA+ + D+ I L P+  +A+AQ+ F 
Sbjct: 391 DFNMAAEIDPGNPDVFHHRGQLKILLDQVDEAVGDFDECIRLRPDSALAQAQKCFA 446


>gi|348567011|ref|XP_003469295.1| PREDICTED: mitochondrial import receptor subunit TOM70-like [Cavia
           porcellus]
          Length = 609

 Score =  250 bits (639), Expect = 1e-63,   Method: Compositional matrix adjust.
 Identities = 139/372 (37%), Positives = 215/372 (57%), Gaps = 7/372 (1%)

Query: 6   GAQHAKEEISKRSFFKPSKQFIKTYLKSFPNDPILQP---DGLSNGVELTNGDTNESHEL 62
           G + AKE+   R    PS QFIK+Y  SF +D I QP      S+  +   G+  E  E 
Sbjct: 237 GKEKAKEKYKNREPLMPSPQFIKSYFSSFTDDIISQPMLKGEKSDEDKDKEGEALEVKEN 296

Query: 63  DLLSKAKRAFEHEDYLTAIRHCTEEIESTSSNHTKALARLLRATVYIFTSQSTKAIEDLT 122
               KAK+  E E+Y   I  C++EI++      +AL  LLRAT Y+    +  A  DL 
Sbjct: 297 SGYLKAKQYMEEENYDKIISECSKEIDAQGKYMAEAL--LLRATFYLLIGNANAAKPDLD 354

Query: 123 QLVEDTSVDPKIKVNAHIKRAVVHLHAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYC 182
           +++     + K++ NA IKR  +++        +  D + A  +DP  AD Y+ RGQ+  
Sbjct: 355 KVISLKEANVKLRANALIKRGSMYMQQQQPLL-STQDFNMAADIDPQNADVYHHRGQLKI 413

Query: 183 LFGQYEEALRNLDKTIALNPNFHVARAQRHFVVHKMIVPGDRE-RVEQSLKEFRNFVDTH 241
           L  Q EEA+ + D+ I L P   +A+AQ+ F +++    G+   +++ ++K F   +   
Sbjct: 414 LLDQVEEAVTDFDECIRLRPESALAQAQKCFALYRQAYTGNNSSQIQAAMKGFEEVIKKF 473

Query: 242 SNVVEACTLFAQVLVDQEDFDGAEEYFNRSIRVDPENASLYVHRAMLMLQARGNVDEAIK 301
               E   L+AQ L DQ+ F  A+E +++ I ++P+NA+ YVH+ +L LQ + ++D  ++
Sbjct: 474 PRCAEGYALYAQALTDQQQFGKADEMYDKCIDLEPDNATTYVHKGLLQLQWKQDLDRGLE 533

Query: 302 LIEKAISIDKSCMFAYETLGTIEVQRGRLEEAVKCFNKALPLARDEAELSHIYSLRDAAI 361
           LI KAI ID  C FAYET+GTIEVQRG +E+A+  FNKA+ LA+ E E++H+YSL DAA 
Sbjct: 534 LISKAIEIDNKCDFAYETMGTIEVQRGNMEKAIDMFNKAINLAKSEMEMAHLYSLCDAAH 593

Query: 362 AQMKVCERYNIK 373
           AQ +V ++Y +K
Sbjct: 594 AQTEVAKKYGLK 605



 Score = 48.5 bits (114), Expect = 0.010,   Method: Compositional matrix adjust.
 Identities = 23/56 (41%), Positives = 33/56 (58%)

Query: 471 DLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQRHFV 526
           D + A  +DP  AD Y+ RGQ+  L  Q EEA+ + D+ I L P   +A+AQ+ F 
Sbjct: 390 DFNMAADIDPQNADVYHHRGQLKILLDQVEEAVTDFDECIRLRPESALAQAQKCFA 445


>gi|402858878|ref|XP_003893908.1| PREDICTED: mitochondrial import receptor subunit TOM70 [Papio
           anubis]
          Length = 608

 Score =  250 bits (638), Expect = 1e-63,   Method: Compositional matrix adjust.
 Identities = 139/372 (37%), Positives = 215/372 (57%), Gaps = 7/372 (1%)

Query: 6   GAQHAKEEISKRSFFKPSKQFIKTYLKSFPNDPILQP---DGLSNGVELTNGDTNESHEL 62
           G + AKE+   R    PS QFIK+Y  SF +D I QP      S+  +   G+  E  E 
Sbjct: 236 GKEKAKEKYKNREPLMPSPQFIKSYFSSFTDDIISQPMLKGEKSDEDKDKEGEALEVKEN 295

Query: 63  DLLSKAKRAFEHEDYLTAIRHCTEEIESTSSNHTKALARLLRATVYIFTSQSTKAIEDLT 122
               KAK+  E E+Y   I  C++EI++      +AL  LLRAT Y+    +  A  DL 
Sbjct: 296 SGYLKAKQYMEEENYDKIISECSKEIDAEGKYMAEAL--LLRATFYLLIGNANAAKPDLD 353

Query: 123 QLVEDTSVDPKIKVNAHIKRAVVHLHAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYC 182
           +++     + K++ NA IKR  +++        +  D + A  +DP  AD Y+ RGQ+  
Sbjct: 354 KVISLKEANVKLRANALIKRGSMYMQQQQPLL-STQDFNMAADIDPQNADVYHHRGQLKI 412

Query: 183 LFGQYEEALRNLDKTIALNPNFHVARAQRHFVVHKMIVPGDRE-RVEQSLKEFRNFVDTH 241
           L  Q EEA+ + D+ I L P   +A+AQ+ F +++    G+   +++ ++K F   +   
Sbjct: 413 LLDQVEEAVADFDECIRLRPESALAQAQKCFALYRQAYTGNNSSQIQAAMKGFEEVIKKF 472

Query: 242 SNVVEACTLFAQVLVDQEDFDGAEEYFNRSIRVDPENASLYVHRAMLMLQARGNVDEAIK 301
               E   L+AQ L DQ+ F  A+E +++ I ++P+NA+ YVH+ +L LQ + ++D  ++
Sbjct: 473 PRCAEGYALYAQALTDQQQFGKADEMYDKCIDLEPDNATTYVHKGLLQLQWKQDLDRGLE 532

Query: 302 LIEKAISIDKSCMFAYETLGTIEVQRGRLEEAVKCFNKALPLARDEAELSHIYSLRDAAI 361
           LI KAI ID  C FAYET+GTIEVQRG +E+A+  FNKA+ LA+ E E++H+YSL DAA 
Sbjct: 533 LISKAIEIDNKCDFAYETMGTIEVQRGNMEKAIDMFNKAINLAKSEMEMAHLYSLCDAAH 592

Query: 362 AQMKVCERYNIK 373
           AQ +V ++Y +K
Sbjct: 593 AQTEVAKKYGLK 604



 Score = 48.5 bits (114), Expect = 0.010,   Method: Compositional matrix adjust.
 Identities = 23/56 (41%), Positives = 33/56 (58%)

Query: 471 DLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQRHFV 526
           D + A  +DP  AD Y+ RGQ+  L  Q EEA+ + D+ I L P   +A+AQ+ F 
Sbjct: 389 DFNMAADIDPQNADVYHHRGQLKILLDQVEEAVADFDECIRLRPESALAQAQKCFA 444


>gi|194380862|dbj|BAG63999.1| unnamed protein product [Homo sapiens]
          Length = 501

 Score =  250 bits (638), Expect = 1e-63,   Method: Compositional matrix adjust.
 Identities = 139/372 (37%), Positives = 215/372 (57%), Gaps = 7/372 (1%)

Query: 6   GAQHAKEEISKRSFFKPSKQFIKTYLKSFPNDPILQP---DGLSNGVELTNGDTNESHEL 62
           G + AKE+   R    PS QFIK+Y  SF +D I QP      S+  +   G+  E  E 
Sbjct: 129 GKEKAKEKYKNREPLMPSPQFIKSYFSSFTDDIISQPMLKGEKSDEDKDKEGEALEVKEN 188

Query: 63  DLLSKAKRAFEHEDYLTAIRHCTEEIESTSSNHTKALARLLRATVYIFTSQSTKAIEDLT 122
               KAK+  E E+Y   I  C++EI++      +AL  LLRAT Y+    +  A  DL 
Sbjct: 189 SGYLKAKQYMEEENYDKIISECSKEIDAEGKYMAEAL--LLRATFYLLIGNANAAKPDLD 246

Query: 123 QLVEDTSVDPKIKVNAHIKRAVVHLHAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYC 182
           +++     + K++ NA IKR  +++        +  D + A  +DP  AD Y+ RGQ+  
Sbjct: 247 KVISLKEANVKLRANALIKRGSMYMQQQQPLL-STQDFNMAADIDPQNADVYHHRGQLKI 305

Query: 183 LFGQYEEALRNLDKTIALNPNFHVARAQRHFVVHKMIVPGDRE-RVEQSLKEFRNFVDTH 241
           L  Q EEA+ + D+ I L P   +A+AQ+ F +++    G+   +++ ++K F   +   
Sbjct: 306 LLDQVEEAVADFDECIRLRPESALAQAQKCFALYRQAYTGNNSSQIQAAMKGFEEVIKKF 365

Query: 242 SNVVEACTLFAQVLVDQEDFDGAEEYFNRSIRVDPENASLYVHRAMLMLQARGNVDEAIK 301
               E   L+AQ L DQ+ F  A+E +++ I ++P+NA+ YVH+ +L LQ + ++D  ++
Sbjct: 366 PRCAEGYALYAQALTDQQQFGKADEMYDKCIDLEPDNATTYVHKGLLQLQWKQDLDRGLE 425

Query: 302 LIEKAISIDKSCMFAYETLGTIEVQRGRLEEAVKCFNKALPLARDEAELSHIYSLRDAAI 361
           LI KAI ID  C FAYET+GTIEVQRG +E+A+  FNKA+ LA+ E E++H+YSL DAA 
Sbjct: 426 LISKAIEIDNKCDFAYETMGTIEVQRGNMEKAIDMFNKAINLAKSEMEMAHLYSLCDAAH 485

Query: 362 AQMKVCERYNIK 373
           AQ +V ++Y +K
Sbjct: 486 AQTEVAKKYGLK 497



 Score = 48.1 bits (113), Expect = 0.011,   Method: Compositional matrix adjust.
 Identities = 23/56 (41%), Positives = 33/56 (58%)

Query: 471 DLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQRHFV 526
           D + A  +DP  AD Y+ RGQ+  L  Q EEA+ + D+ I L P   +A+AQ+ F 
Sbjct: 282 DFNMAADIDPQNADVYHHRGQLKILLDQVEEAVADFDECIRLRPESALAQAQKCFA 337


>gi|395821344|ref|XP_003784004.1| PREDICTED: mitochondrial import receptor subunit TOM70 [Otolemur
           garnettii]
          Length = 609

 Score =  250 bits (638), Expect = 1e-63,   Method: Compositional matrix adjust.
 Identities = 139/372 (37%), Positives = 216/372 (58%), Gaps = 7/372 (1%)

Query: 6   GAQHAKEEISKRSFFKPSKQFIKTYLKSFPNDPILQP---DGLSNGVELTNGDTNESHEL 62
           G + AKE+   R    PS QFIK+Y  SF +D I QP      S+  +   G+  E  E 
Sbjct: 237 GKEKAKEKYKNREPLMPSPQFIKSYFSSFTDDIISQPMLKGEKSDEDKDKEGEALEVKEN 296

Query: 63  DLLSKAKRAFEHEDYLTAIRHCTEEIESTSSNHTKALARLLRATVYIFTSQSTKAIEDLT 122
               KAK+  E E+Y   I  C++EI++      +AL  LLRAT Y+    +  A  DL 
Sbjct: 297 SGYLKAKQYMEEENYDKIISECSKEIDAQGKYMAEAL--LLRATFYLLIGNANAAKPDLD 354

Query: 123 QLVEDTSVDPKIKVNAHIKRAVVHLHAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYC 182
           +++     + K++ NA IKR  +++        +  D + A  +DP  AD Y+ RGQ+  
Sbjct: 355 KVIGLKEANVKLRANALIKRGSMYMQQQQPLL-STQDFNMAADIDPQNADVYHHRGQLKI 413

Query: 183 LFGQYEEALRNLDKTIALNPNFHVARAQRHFVVHKMIVPGDRE-RVEQSLKEFRNFVDTH 241
           L  Q EEA+ + D+ I L P   +A+AQ+ F +++    G+   +++ ++K F   +   
Sbjct: 414 LLDQVEEAVADFDECIRLRPESALAQAQKCFALYRQAYTGNNSSQIQSAIKGFEEVIKKF 473

Query: 242 SNVVEACTLFAQVLVDQEDFDGAEEYFNRSIRVDPENASLYVHRAMLMLQARGNVDEAIK 301
               E   L+AQ L DQ+ F  A+E +++ I ++P+NA+ YVH+ +L LQ + ++D+ ++
Sbjct: 474 PRCAEGYALYAQALTDQQQFGKADEMYDKCIDLEPDNATTYVHKGLLQLQWKQDLDKGLE 533

Query: 302 LIEKAISIDKSCMFAYETLGTIEVQRGRLEEAVKCFNKALPLARDEAELSHIYSLRDAAI 361
           LI KAI ID  C FAYET+GTIEVQRG +E+A+  FNKA+ LA+ E E++H+YSL DAA 
Sbjct: 534 LISKAIEIDNKCDFAYETMGTIEVQRGNMEKAIDMFNKAINLAKSEMEMAHLYSLCDAAH 593

Query: 362 AQMKVCERYNIK 373
           AQ +V ++Y +K
Sbjct: 594 AQTEVAKKYGLK 605



 Score = 48.1 bits (113), Expect = 0.010,   Method: Compositional matrix adjust.
 Identities = 23/56 (41%), Positives = 33/56 (58%)

Query: 471 DLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQRHFV 526
           D + A  +DP  AD Y+ RGQ+  L  Q EEA+ + D+ I L P   +A+AQ+ F 
Sbjct: 390 DFNMAADIDPQNADVYHHRGQLKILLDQVEEAVADFDECIRLRPESALAQAQKCFA 445


>gi|54607135|ref|NP_055635.3| mitochondrial import receptor subunit TOM70 [Homo sapiens]
 gi|426341399|ref|XP_004036025.1| PREDICTED: mitochondrial import receptor subunit TOM70 [Gorilla
           gorilla gorilla]
 gi|14285643|sp|O94826.1|TOM70_HUMAN RecName: Full=Mitochondrial import receptor subunit TOM70; AltName:
           Full=Mitochondrial precursor proteins import receptor;
           AltName: Full=Translocase of outer membrane 70 kDa
           subunit
 gi|13177706|gb|AAH03633.1| Translocase of outer mitochondrial membrane 70 homolog A (S.
           cerevisiae) [Homo sapiens]
 gi|31419793|gb|AAH52994.1| Translocase of outer mitochondrial membrane 70 homolog A (S.
           cerevisiae) [Homo sapiens]
 gi|119600228|gb|EAW79822.1| translocase of outer mitochondrial membrane 70 homolog A (yeast),
           isoform CRA_a [Homo sapiens]
 gi|119600229|gb|EAW79823.1| translocase of outer mitochondrial membrane 70 homolog A (yeast),
           isoform CRA_a [Homo sapiens]
 gi|123999829|gb|ABM87423.1| translocase of outer mitochondrial membrane 70 homolog A (S.
           cerevisiae) [synthetic construct]
 gi|168267528|dbj|BAG09820.1| translocase of outer mitochondrial membrane 70 homolog A [synthetic
           construct]
          Length = 608

 Score =  250 bits (638), Expect = 1e-63,   Method: Compositional matrix adjust.
 Identities = 139/372 (37%), Positives = 215/372 (57%), Gaps = 7/372 (1%)

Query: 6   GAQHAKEEISKRSFFKPSKQFIKTYLKSFPNDPILQP---DGLSNGVELTNGDTNESHEL 62
           G + AKE+   R    PS QFIK+Y  SF +D I QP      S+  +   G+  E  E 
Sbjct: 236 GKEKAKEKYKNREPLMPSPQFIKSYFSSFTDDIISQPMLKGEKSDEDKDKEGEALEVKEN 295

Query: 63  DLLSKAKRAFEHEDYLTAIRHCTEEIESTSSNHTKALARLLRATVYIFTSQSTKAIEDLT 122
               KAK+  E E+Y   I  C++EI++      +AL  LLRAT Y+    +  A  DL 
Sbjct: 296 SGYLKAKQYMEEENYDKIISECSKEIDAEGKYMAEAL--LLRATFYLLIGNANAAKPDLD 353

Query: 123 QLVEDTSVDPKIKVNAHIKRAVVHLHAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYC 182
           +++     + K++ NA IKR  +++        +  D + A  +DP  AD Y+ RGQ+  
Sbjct: 354 KVISLKEANVKLRANALIKRGSMYMQQQQPLL-STQDFNMAADIDPQNADVYHHRGQLKI 412

Query: 183 LFGQYEEALRNLDKTIALNPNFHVARAQRHFVVHKMIVPGDRE-RVEQSLKEFRNFVDTH 241
           L  Q EEA+ + D+ I L P   +A+AQ+ F +++    G+   +++ ++K F   +   
Sbjct: 413 LLDQVEEAVADFDECIRLRPESALAQAQKCFALYRQAYTGNNSSQIQAAMKGFEEVIKKF 472

Query: 242 SNVVEACTLFAQVLVDQEDFDGAEEYFNRSIRVDPENASLYVHRAMLMLQARGNVDEAIK 301
               E   L+AQ L DQ+ F  A+E +++ I ++P+NA+ YVH+ +L LQ + ++D  ++
Sbjct: 473 PRCAEGYALYAQALTDQQQFGKADEMYDKCIDLEPDNATTYVHKGLLQLQWKQDLDRGLE 532

Query: 302 LIEKAISIDKSCMFAYETLGTIEVQRGRLEEAVKCFNKALPLARDEAELSHIYSLRDAAI 361
           LI KAI ID  C FAYET+GTIEVQRG +E+A+  FNKA+ LA+ E E++H+YSL DAA 
Sbjct: 533 LISKAIEIDNKCDFAYETMGTIEVQRGNMEKAIDMFNKAINLAKSEMEMAHLYSLCDAAH 592

Query: 362 AQMKVCERYNIK 373
           AQ +V ++Y +K
Sbjct: 593 AQTEVAKKYGLK 604



 Score = 48.1 bits (113), Expect = 0.011,   Method: Compositional matrix adjust.
 Identities = 23/56 (41%), Positives = 33/56 (58%)

Query: 471 DLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQRHFV 526
           D + A  +DP  AD Y+ RGQ+  L  Q EEA+ + D+ I L P   +A+AQ+ F 
Sbjct: 389 DFNMAADIDPQNADVYHHRGQLKILLDQVEEAVADFDECIRLRPESALAQAQKCFA 444


>gi|332225229|ref|XP_003261782.1| PREDICTED: mitochondrial import receptor subunit TOM70 [Nomascus
           leucogenys]
          Length = 608

 Score =  250 bits (638), Expect = 1e-63,   Method: Compositional matrix adjust.
 Identities = 139/372 (37%), Positives = 215/372 (57%), Gaps = 7/372 (1%)

Query: 6   GAQHAKEEISKRSFFKPSKQFIKTYLKSFPNDPILQP---DGLSNGVELTNGDTNESHEL 62
           G + AKE+   R    PS QFIK+Y  SF +D I QP      S+  +   G+  E  E 
Sbjct: 236 GKEKAKEKYKNREPLMPSPQFIKSYFSSFTDDIISQPMLKGEKSDEDKDKEGEALEVKEN 295

Query: 63  DLLSKAKRAFEHEDYLTAIRHCTEEIESTSSNHTKALARLLRATVYIFTSQSTKAIEDLT 122
               KAK+  E E+Y   I  C++EI++      +AL  LLRAT Y+    +  A  DL 
Sbjct: 296 SGYIKAKQYMEEENYDKIISECSKEIDTEGKYMAEAL--LLRATFYLLIGNANAAKPDLD 353

Query: 123 QLVEDTSVDPKIKVNAHIKRAVVHLHAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYC 182
           +++     + K++ NA IKR  +++        +  D + A  +DP  AD Y+ RGQ+  
Sbjct: 354 KVISLKEANVKLRANALIKRGSMYMQQQQPLL-STQDFNMAADIDPQNADVYHHRGQLKI 412

Query: 183 LFGQYEEALRNLDKTIALNPNFHVARAQRHFVVHKMIVPGDRE-RVEQSLKEFRNFVDTH 241
           L  Q EEA+ + D+ I L P   +A+AQ+ F +++    G+   +++ ++K F   +   
Sbjct: 413 LLDQVEEAVADFDECIRLRPESALAQAQKCFALYRQAYTGNNSSQIQAAMKGFEEVIKKF 472

Query: 242 SNVVEACTLFAQVLVDQEDFDGAEEYFNRSIRVDPENASLYVHRAMLMLQARGNVDEAIK 301
               E   L+AQ L DQ+ F  A+E +++ I ++P+NA+ YVH+ +L LQ + ++D  ++
Sbjct: 473 PRCAEGYALYAQALTDQQQFGKADEMYDKCIDLEPDNATTYVHKGLLQLQWKQDLDRGLE 532

Query: 302 LIEKAISIDKSCMFAYETLGTIEVQRGRLEEAVKCFNKALPLARDEAELSHIYSLRDAAI 361
           LI KAI ID  C FAYET+GTIEVQRG +E+A+  FNKA+ LA+ E E++H+YSL DAA 
Sbjct: 533 LISKAIEIDNKCDFAYETMGTIEVQRGNMEKAIDMFNKAINLAKSEMEMAHLYSLCDAAH 592

Query: 362 AQMKVCERYNIK 373
           AQ +V ++Y +K
Sbjct: 593 AQTEVAKKYGLK 604



 Score = 48.1 bits (113), Expect = 0.011,   Method: Compositional matrix adjust.
 Identities = 23/56 (41%), Positives = 33/56 (58%)

Query: 471 DLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQRHFV 526
           D + A  +DP  AD Y+ RGQ+  L  Q EEA+ + D+ I L P   +A+AQ+ F 
Sbjct: 389 DFNMAADIDPQNADVYHHRGQLKILLDQVEEAVADFDECIRLRPESALAQAQKCFA 444


>gi|40788338|dbj|BAA34439.2| KIAA0719 protein [Homo sapiens]
          Length = 624

 Score =  250 bits (638), Expect = 2e-63,   Method: Compositional matrix adjust.
 Identities = 139/372 (37%), Positives = 215/372 (57%), Gaps = 7/372 (1%)

Query: 6   GAQHAKEEISKRSFFKPSKQFIKTYLKSFPNDPILQP---DGLSNGVELTNGDTNESHEL 62
           G + AKE+   R    PS QFIK+Y  SF +D I QP      S+  +   G+  E  E 
Sbjct: 252 GKEKAKEKYKNREPLMPSPQFIKSYFSSFTDDIISQPMLKGEKSDEDKDKEGEALEVKEN 311

Query: 63  DLLSKAKRAFEHEDYLTAIRHCTEEIESTSSNHTKALARLLRATVYIFTSQSTKAIEDLT 122
               KAK+  E E+Y   I  C++EI++      +AL  LLRAT Y+    +  A  DL 
Sbjct: 312 SGYLKAKQYMEEENYDKIISECSKEIDAEGKYMAEAL--LLRATFYLLIGNANAAKPDLD 369

Query: 123 QLVEDTSVDPKIKVNAHIKRAVVHLHAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYC 182
           +++     + K++ NA IKR  +++        +  D + A  +DP  AD Y+ RGQ+  
Sbjct: 370 KVISLKEANVKLRANALIKRGSMYMQQQQPLL-STQDFNMAADIDPQNADVYHHRGQLKI 428

Query: 183 LFGQYEEALRNLDKTIALNPNFHVARAQRHFVVHKMIVPGDRE-RVEQSLKEFRNFVDTH 241
           L  Q EEA+ + D+ I L P   +A+AQ+ F +++    G+   +++ ++K F   +   
Sbjct: 429 LLDQVEEAVADFDECIRLRPESALAQAQKCFALYRQAYTGNNSSQIQAAMKGFEEVIKKF 488

Query: 242 SNVVEACTLFAQVLVDQEDFDGAEEYFNRSIRVDPENASLYVHRAMLMLQARGNVDEAIK 301
               E   L+AQ L DQ+ F  A+E +++ I ++P+NA+ YVH+ +L LQ + ++D  ++
Sbjct: 489 PRCAEGYALYAQALTDQQQFGKADEMYDKCIDLEPDNATTYVHKGLLQLQWKQDLDRGLE 548

Query: 302 LIEKAISIDKSCMFAYETLGTIEVQRGRLEEAVKCFNKALPLARDEAELSHIYSLRDAAI 361
           LI KAI ID  C FAYET+GTIEVQRG +E+A+  FNKA+ LA+ E E++H+YSL DAA 
Sbjct: 549 LISKAIEIDNKCDFAYETMGTIEVQRGNMEKAIDMFNKAINLAKSEMEMAHLYSLCDAAH 608

Query: 362 AQMKVCERYNIK 373
           AQ +V ++Y +K
Sbjct: 609 AQTEVAKKYGLK 620



 Score = 48.1 bits (113), Expect = 0.012,   Method: Compositional matrix adjust.
 Identities = 23/56 (41%), Positives = 33/56 (58%)

Query: 471 DLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQRHFV 526
           D + A  +DP  AD Y+ RGQ+  L  Q EEA+ + D+ I L P   +A+AQ+ F 
Sbjct: 405 DFNMAADIDPQNADVYHHRGQLKILLDQVEEAVADFDECIRLRPESALAQAQKCFA 460


>gi|297670504|ref|XP_002813404.1| PREDICTED: mitochondrial import receptor subunit TOM70 [Pongo
           abelii]
          Length = 608

 Score =  250 bits (638), Expect = 2e-63,   Method: Compositional matrix adjust.
 Identities = 139/372 (37%), Positives = 215/372 (57%), Gaps = 7/372 (1%)

Query: 6   GAQHAKEEISKRSFFKPSKQFIKTYLKSFPNDPILQP---DGLSNGVELTNGDTNESHEL 62
           G + AKE+   R    PS QFIK+Y  SF +D I QP      S+  +   G+  E  E 
Sbjct: 236 GKEKAKEKYKNREPLMPSPQFIKSYFSSFTDDIISQPMLKGEKSDEDKDKEGEALEVKEN 295

Query: 63  DLLSKAKRAFEHEDYLTAIRHCTEEIESTSSNHTKALARLLRATVYIFTSQSTKAIEDLT 122
               KAK+  E E+Y   I  C++EI++      +AL  LLRAT Y+    +  A  DL 
Sbjct: 296 SGYLKAKQYMEEENYDKIISECSKEIDAEGKYMAEAL--LLRATFYLLIGNANAAKPDLD 353

Query: 123 QLVEDTSVDPKIKVNAHIKRAVVHLHAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYC 182
           +++     + K++ NA IKR  +++        +  D + A  +DP  AD Y+ RGQ+  
Sbjct: 354 KVISLKEANVKLRANALIKRGSMYMQQQQPLL-STQDFNMAADIDPQNADVYHHRGQLKI 412

Query: 183 LFGQYEEALRNLDKTIALNPNFHVARAQRHFVVHKMIVPGDRE-RVEQSLKEFRNFVDTH 241
           L  Q EEA+ + D+ I L P   +A+AQ+ F +++    G+   +++ ++K F   +   
Sbjct: 413 LLDQVEEAVADFDECIRLRPESALAQAQKCFALYRQAYTGNNSSQIQAAMKGFEEVIKKF 472

Query: 242 SNVVEACTLFAQVLVDQEDFDGAEEYFNRSIRVDPENASLYVHRAMLMLQARGNVDEAIK 301
               E   L+AQ L DQ+ F  A+E +++ I ++P+NA+ YVH+ +L LQ + ++D  ++
Sbjct: 473 PRCAEGYALYAQALTDQQQFGKADEMYDKCIDLEPDNATTYVHKGLLQLQWKQDLDRGLE 532

Query: 302 LIEKAISIDKSCMFAYETLGTIEVQRGRLEEAVKCFNKALPLARDEAELSHIYSLRDAAI 361
           LI KAI ID  C FAYET+GTIEVQRG +E+A+  FNKA+ LA+ E E++H+YSL DAA 
Sbjct: 533 LISKAIEIDNKCDFAYETMGTIEVQRGNMEKAIDMFNKAINLAKSEMEMAHLYSLCDAAH 592

Query: 362 AQMKVCERYNIK 373
           AQ +V ++Y +K
Sbjct: 593 AQTEVAKKYGLK 604



 Score = 48.1 bits (113), Expect = 0.011,   Method: Compositional matrix adjust.
 Identities = 23/56 (41%), Positives = 33/56 (58%)

Query: 471 DLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQRHFV 526
           D + A  +DP  AD Y+ RGQ+  L  Q EEA+ + D+ I L P   +A+AQ+ F 
Sbjct: 389 DFNMAADIDPQNADVYHHRGQLKILLDQVEEAVADFDECIRLRPESALAQAQKCFA 444


>gi|67972314|dbj|BAE02499.1| unnamed protein product [Macaca fascicularis]
          Length = 590

 Score =  250 bits (638), Expect = 2e-63,   Method: Compositional matrix adjust.
 Identities = 139/372 (37%), Positives = 215/372 (57%), Gaps = 7/372 (1%)

Query: 6   GAQHAKEEISKRSFFKPSKQFIKTYLKSFPNDPILQP---DGLSNGVELTNGDTNESHEL 62
           G + AKE+   R    PS QFIK+Y  SF +D I QP      S+  +   G+  E  E 
Sbjct: 218 GKEKAKEKYKNREPLMPSPQFIKSYFSSFTDDIISQPMLKGEKSDEDKDKEGEALEVKEN 277

Query: 63  DLLSKAKRAFEHEDYLTAIRHCTEEIESTSSNHTKALARLLRATVYIFTSQSTKAIEDLT 122
               KAK+  E E+Y   I  C++EI++      +AL  LLRAT Y+    +  A  DL 
Sbjct: 278 SGYLKAKQYMEEENYDKIISECSKEIDAEGKYMAEAL--LLRATFYLLIGSANAAKPDLD 335

Query: 123 QLVEDTSVDPKIKVNAHIKRAVVHLHAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYC 182
           +++     + K++ NA IKR  +++        +  D + A  +DP  AD Y+ RGQ+  
Sbjct: 336 KVISLKEANVKLRANALIKRGSMYMQQQQPLL-STQDFNMAADIDPQNADVYHHRGQLKI 394

Query: 183 LFGQYEEALRNLDKTIALNPNFHVARAQRHFVVHKMIVPGDRE-RVEQSLKEFRNFVDTH 241
           L  Q EEA+ + D+ I L P   +A+AQ+ F +++    G+   +++ ++K F   +   
Sbjct: 395 LLDQVEEAVADFDECIRLRPESALAQAQKCFALYRQAYTGNNSSQIQAAMKGFEEVIKKF 454

Query: 242 SNVVEACTLFAQVLVDQEDFDGAEEYFNRSIRVDPENASLYVHRAMLMLQARGNVDEAIK 301
               E   L+AQ L DQ+ F  A+E +++ I ++P+NA+ YVH+ +L LQ + ++D  ++
Sbjct: 455 PRCAEGYALYAQALTDQQQFGKADEMYDKCIDLEPDNATTYVHKGLLQLQWKQDLDRGLE 514

Query: 302 LIEKAISIDKSCMFAYETLGTIEVQRGRLEEAVKCFNKALPLARDEAELSHIYSLRDAAI 361
           LI KAI ID  C FAYET+GTIEVQRG +E+A+  FNKA+ LA+ E E++H+YSL DAA 
Sbjct: 515 LISKAIEIDNKCDFAYETMGTIEVQRGNMEKAIDMFNKAINLAKSEMEMAHLYSLCDAAH 574

Query: 362 AQMKVCERYNIK 373
           AQ +V ++Y +K
Sbjct: 575 AQTEVAKKYGLK 586



 Score = 48.1 bits (113), Expect = 0.011,   Method: Compositional matrix adjust.
 Identities = 23/56 (41%), Positives = 33/56 (58%)

Query: 471 DLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQRHFV 526
           D + A  +DP  AD Y+ RGQ+  L  Q EEA+ + D+ I L P   +A+AQ+ F 
Sbjct: 371 DFNMAADIDPQNADVYHHRGQLKILLDQVEEAVADFDECIRLRPESALAQAQKCFA 426


>gi|388454166|ref|NP_001253082.1| mitochondrial import receptor subunit TOM70 [Macaca mulatta]
 gi|355559283|gb|EHH16011.1| hypothetical protein EGK_11235 [Macaca mulatta]
 gi|380787847|gb|AFE65799.1| mitochondrial import receptor subunit TOM70 [Macaca mulatta]
 gi|383408917|gb|AFH27672.1| mitochondrial import receptor subunit TOM70 [Macaca mulatta]
          Length = 608

 Score =  250 bits (638), Expect = 2e-63,   Method: Compositional matrix adjust.
 Identities = 139/372 (37%), Positives = 215/372 (57%), Gaps = 7/372 (1%)

Query: 6   GAQHAKEEISKRSFFKPSKQFIKTYLKSFPNDPILQP---DGLSNGVELTNGDTNESHEL 62
           G + AKE+   R    PS QFIK+Y  SF +D I QP      S+  +   G+  E  E 
Sbjct: 236 GKEKAKEKYKNREPLMPSPQFIKSYFSSFTDDIISQPMLKGEKSDEDKDKEGEALEVKEN 295

Query: 63  DLLSKAKRAFEHEDYLTAIRHCTEEIESTSSNHTKALARLLRATVYIFTSQSTKAIEDLT 122
               KAK+  E E+Y   I  C++EI++      +AL  LLRAT Y+    +  A  DL 
Sbjct: 296 SGYLKAKQYMEEENYDKIISECSKEIDAEGKYMAEAL--LLRATFYLLIGSANAAKPDLD 353

Query: 123 QLVEDTSVDPKIKVNAHIKRAVVHLHAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYC 182
           +++     + K++ NA IKR  +++        +  D + A  +DP  AD Y+ RGQ+  
Sbjct: 354 KVISLKEANVKLRANALIKRGSMYMQQQQPLL-STQDFNMAADIDPQNADVYHHRGQLKI 412

Query: 183 LFGQYEEALRNLDKTIALNPNFHVARAQRHFVVHKMIVPGDRE-RVEQSLKEFRNFVDTH 241
           L  Q EEA+ + D+ I L P   +A+AQ+ F +++    G+   +++ ++K F   +   
Sbjct: 413 LLDQVEEAVADFDECIRLRPESALAQAQKCFALYRQAYTGNNSSQIQAAMKGFEEVIKKF 472

Query: 242 SNVVEACTLFAQVLVDQEDFDGAEEYFNRSIRVDPENASLYVHRAMLMLQARGNVDEAIK 301
               E   L+AQ L DQ+ F  A+E +++ I ++P+NA+ YVH+ +L LQ + ++D  ++
Sbjct: 473 PRCAEGYALYAQALTDQQQFGKADEMYDKCIDLEPDNATTYVHKGLLQLQWKQDLDRGLE 532

Query: 302 LIEKAISIDKSCMFAYETLGTIEVQRGRLEEAVKCFNKALPLARDEAELSHIYSLRDAAI 361
           LI KAI ID  C FAYET+GTIEVQRG +E+A+  FNKA+ LA+ E E++H+YSL DAA 
Sbjct: 533 LISKAIEIDNKCDFAYETMGTIEVQRGNMEKAIDMFNKAINLAKSEMEMAHLYSLCDAAH 592

Query: 362 AQMKVCERYNIK 373
           AQ +V ++Y +K
Sbjct: 593 AQTEVAKKYGLK 604



 Score = 48.1 bits (113), Expect = 0.011,   Method: Compositional matrix adjust.
 Identities = 23/56 (41%), Positives = 33/56 (58%)

Query: 471 DLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQRHFV 526
           D + A  +DP  AD Y+ RGQ+  L  Q EEA+ + D+ I L P   +A+AQ+ F 
Sbjct: 389 DFNMAADIDPQNADVYHHRGQLKILLDQVEEAVADFDECIRLRPESALAQAQKCFA 444


>gi|355746369|gb|EHH50983.1| hypothetical protein EGM_10294, partial [Macaca fascicularis]
          Length = 600

 Score =  250 bits (638), Expect = 2e-63,   Method: Compositional matrix adjust.
 Identities = 139/372 (37%), Positives = 215/372 (57%), Gaps = 7/372 (1%)

Query: 6   GAQHAKEEISKRSFFKPSKQFIKTYLKSFPNDPILQP---DGLSNGVELTNGDTNESHEL 62
           G + AKE+   R    PS QFIK+Y  SF +D I QP      S+  +   G+  E  E 
Sbjct: 228 GKEKAKEKYKNREPLMPSPQFIKSYFSSFTDDIISQPMLKGEKSDEDKDKEGEALEVKEN 287

Query: 63  DLLSKAKRAFEHEDYLTAIRHCTEEIESTSSNHTKALARLLRATVYIFTSQSTKAIEDLT 122
               KAK+  E E+Y   I  C++EI++      +AL  LLRAT Y+    +  A  DL 
Sbjct: 288 SGYLKAKQYMEEENYDKIISECSKEIDAEGKYMAEAL--LLRATFYLLIGSANAAKPDLD 345

Query: 123 QLVEDTSVDPKIKVNAHIKRAVVHLHAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYC 182
           +++     + K++ NA IKR  +++        +  D + A  +DP  AD Y+ RGQ+  
Sbjct: 346 KVISLKEANVKLRANALIKRGSMYMQQQQPLL-STQDFNMAADIDPQNADVYHHRGQLKI 404

Query: 183 LFGQYEEALRNLDKTIALNPNFHVARAQRHFVVHKMIVPGDRE-RVEQSLKEFRNFVDTH 241
           L  Q EEA+ + D+ I L P   +A+AQ+ F +++    G+   +++ ++K F   +   
Sbjct: 405 LLDQVEEAVADFDECIRLRPESALAQAQKCFALYRQAYTGNNSSQIQAAMKGFEEVIKKF 464

Query: 242 SNVVEACTLFAQVLVDQEDFDGAEEYFNRSIRVDPENASLYVHRAMLMLQARGNVDEAIK 301
               E   L+AQ L DQ+ F  A+E +++ I ++P+NA+ YVH+ +L LQ + ++D  ++
Sbjct: 465 PRCAEGYALYAQALTDQQQFGKADEMYDKCIDLEPDNATTYVHKGLLQLQWKQDLDRGLE 524

Query: 302 LIEKAISIDKSCMFAYETLGTIEVQRGRLEEAVKCFNKALPLARDEAELSHIYSLRDAAI 361
           LI KAI ID  C FAYET+GTIEVQRG +E+A+  FNKA+ LA+ E E++H+YSL DAA 
Sbjct: 525 LISKAIEIDNKCDFAYETMGTIEVQRGNMEKAIDMFNKAINLAKSEMEMAHLYSLCDAAH 584

Query: 362 AQMKVCERYNIK 373
           AQ +V ++Y +K
Sbjct: 585 AQTEVAKKYGLK 596



 Score = 48.1 bits (113), Expect = 0.011,   Method: Compositional matrix adjust.
 Identities = 23/56 (41%), Positives = 33/56 (58%)

Query: 471 DLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQRHFV 526
           D + A  +DP  AD Y+ RGQ+  L  Q EEA+ + D+ I L P   +A+AQ+ F 
Sbjct: 381 DFNMAADIDPQNADVYHHRGQLKILLDQVEEAVADFDECIRLRPESALAQAQKCFA 436


>gi|156717970|ref|NP_001096527.1| translocase of outer mitochondrial membrane 70 homolog A [Xenopus
           (Silurana) tropicalis]
 gi|138519663|gb|AAI35772.1| LOC100125169 protein [Xenopus (Silurana) tropicalis]
          Length = 577

 Score =  250 bits (638), Expect = 2e-63,   Method: Compositional matrix adjust.
 Identities = 139/375 (37%), Positives = 221/375 (58%), Gaps = 13/375 (3%)

Query: 6   GAQHAKEEISKRSFFKPSKQFIKTYLKSFPNDPILQPDGLSNGVELTNGDTNESHELDLL 65
           G + AK++   R    PS QFIK+Y  SF +D I QP  L  G E ++ D ++  E  ++
Sbjct: 205 GKEKAKDKYKNREPLMPSPQFIKSYFSSFTDDIISQP--LQKG-EKSDEDKDKEGEAAVV 261

Query: 66  S------KAKRAFEHEDYLTAIRHCTEEIESTSSNHTKALARLLRATVYIFTSQSTKAIE 119
                  KAK+  E E+Y   I  CT+E+ES      +AL  LLRAT Y+    +  A  
Sbjct: 262 KEKSGYLKAKKYMEEENYDKIISECTKEVESVGKYVAEAL--LLRATFYLLIGNAAAAKP 319

Query: 120 DLTQLVEDTSVDPKIKVNAHIKRAVVHLHAASDFTKAFADLDEAEKVDPNVADSYYQRGQ 179
           DL Q++     + K++ NA IKR  +++        +  D + A  +DP  AD Y+ RGQ
Sbjct: 320 DLDQVISMEECNVKLRANALIKRGSMYMQQQLPAL-STQDFNMAADIDPQNADVYHHRGQ 378

Query: 180 IYCLFGQYEEALRNLDKTIALNPNFHVARAQRHFVVHKMIVPGDRE-RVEQSLKEFRNFV 238
           +  L  Q E+A+ + D+ I L P+  +A+AQ+ F +++    G    +++++++ F + +
Sbjct: 379 LKILLDQVEDAVEDFDECIRLRPDSALAQAQKCFALYRKAYTGSNPLQIKEAMQGFEDVI 438

Query: 239 DTHSNVVEACTLFAQVLVDQEDFDGAEEYFNRSIRVDPENASLYVHRAMLMLQARGNVDE 298
                  E   L+AQ L DQ+ F  A+E +++ I ++P+NA+ YVH+ +L LQ + ++++
Sbjct: 439 TKFPKCAEGYALYAQALTDQQQFGKADEMYDKCIDLEPDNATTYVHKGLLQLQWKQDLEK 498

Query: 299 AIKLIEKAISIDKSCMFAYETLGTIEVQRGRLEEAVKCFNKALPLARDEAELSHIYSLRD 358
            + LI KAI ID  C FAYET+GTIEVQRG L++A++ FNKA+ LA+ E E++H+YSL D
Sbjct: 499 GLDLISKAIEIDNKCDFAYETMGTIEVQRGNLDKAIEMFNKAINLAKSEMEMAHLYSLCD 558

Query: 359 AAIAQMKVCERYNIK 373
           AA AQ +V  +Y +K
Sbjct: 559 AAYAQTEVARKYGLK 573



 Score = 47.8 bits (112), Expect = 0.014,   Method: Compositional matrix adjust.
 Identities = 22/56 (39%), Positives = 34/56 (60%)

Query: 471 DLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQRHFV 526
           D + A  +DP  AD Y+ RGQ+  L  Q E+A+ + D+ I L P+  +A+AQ+ F 
Sbjct: 358 DFNMAADIDPQNADVYHHRGQLKILLDQVEDAVEDFDECIRLRPDSALAQAQKCFA 413


>gi|345795927|ref|XP_535719.3| PREDICTED: mitochondrial import receptor subunit TOM70 [Canis lupus
           familiaris]
          Length = 609

 Score =  249 bits (637), Expect = 2e-63,   Method: Compositional matrix adjust.
 Identities = 137/372 (36%), Positives = 216/372 (58%), Gaps = 7/372 (1%)

Query: 6   GAQHAKEEISKRSFFKPSKQFIKTYLKSFPNDPILQP---DGLSNGVELTNGDTNESHEL 62
           G + AKE+   R    PS QFIK+Y  SF +D I QP      S+  +   G+ +E  E 
Sbjct: 237 GKEKAKEKYKNREPLMPSPQFIKSYFSSFTDDIISQPMLKGEKSDEDKDKEGEASEVKEN 296

Query: 63  DLLSKAKRAFEHEDYLTAIRHCTEEIESTSSNHTKALARLLRATVYIFTSQSTKAIEDLT 122
               +AK+  E E+Y   I  C++EI++      +AL  LLRAT Y+    +  A  DL 
Sbjct: 297 SGYLRAKQYMEEENYDKIISECSKEIDAQGKYMAEAL--LLRATFYLLIGNANAAKPDLD 354

Query: 123 QLVEDTSVDPKIKVNAHIKRAVVHLHAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYC 182
           +++     + K++ NA IKR  +++        +  D + A  +DP  AD Y+ RGQ+  
Sbjct: 355 KVISLKEANVKLRANALIKRGSMYMQQQQPLL-STQDFNMAADIDPQNADVYHHRGQLKI 413

Query: 183 LFGQYEEALRNLDKTIALNPNFHVARAQRHFVVHKMIVPGDRE-RVEQSLKEFRNFVDTH 241
           L  Q EEA+ + D+ I L P   +A+AQ+ F +++    G+   +++ ++K F   +   
Sbjct: 414 LLDQVEEAVADFDECIRLRPESALAQAQKCFALYRQAYTGNNSSQIQAAMKGFEEVIKKF 473

Query: 242 SNVVEACTLFAQVLVDQEDFDGAEEYFNRSIRVDPENASLYVHRAMLMLQARGNVDEAIK 301
               E   L+AQ L DQ+ F  A++ +++ I ++P+NA+ YVH+ +L LQ + ++D  ++
Sbjct: 474 PRCAEGYALYAQALTDQQQFGKADDMYDKCIDLEPDNATTYVHKGLLQLQWKQDLDRGLE 533

Query: 302 LIEKAISIDKSCMFAYETLGTIEVQRGRLEEAVKCFNKALPLARDEAELSHIYSLRDAAI 361
           LI KAI ID  C FAYET+GTIEVQRG +E+A+  FNKA+ LA+ E E++H+YSL DAA 
Sbjct: 534 LISKAIEIDNKCDFAYETMGTIEVQRGNMEKAIDMFNKAINLAKSEMEMAHLYSLCDAAH 593

Query: 362 AQMKVCERYNIK 373
           AQ +V ++Y +K
Sbjct: 594 AQTEVAKKYGLK 605



 Score = 48.1 bits (113), Expect = 0.011,   Method: Compositional matrix adjust.
 Identities = 23/56 (41%), Positives = 33/56 (58%)

Query: 471 DLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQRHFV 526
           D + A  +DP  AD Y+ RGQ+  L  Q EEA+ + D+ I L P   +A+AQ+ F 
Sbjct: 390 DFNMAADIDPQNADVYHHRGQLKILLDQVEEAVADFDECIRLRPESALAQAQKCFA 445


>gi|410970316|ref|XP_003991631.1| PREDICTED: mitochondrial import receptor subunit TOM70 [Felis
           catus]
          Length = 609

 Score =  249 bits (636), Expect = 2e-63,   Method: Compositional matrix adjust.
 Identities = 137/372 (36%), Positives = 216/372 (58%), Gaps = 7/372 (1%)

Query: 6   GAQHAKEEISKRSFFKPSKQFIKTYLKSFPNDPILQP---DGLSNGVELTNGDTNESHEL 62
           G + AKE+   R    PS QFIK+Y  SF +D I QP      S+  +   G+ +E  E 
Sbjct: 237 GKEKAKEKYKNREPLMPSPQFIKSYFSSFTDDIISQPMLKGEKSDEDKDKEGEASEVKEN 296

Query: 63  DLLSKAKRAFEHEDYLTAIRHCTEEIESTSSNHTKALARLLRATVYIFTSQSTKAIEDLT 122
               +AK+  E E+Y   I  C++EI++      +AL  LLRAT Y+    +  A  DL 
Sbjct: 297 SGYLRAKQYMEEENYDKIISECSKEIDAQGKYMAEAL--LLRATFYLLIGNANAAKPDLD 354

Query: 123 QLVEDTSVDPKIKVNAHIKRAVVHLHAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYC 182
           +++     + K++ NA IKR  +++        +  D + A  +DP  AD Y+ RGQ+  
Sbjct: 355 KVISLKEANVKLRANALIKRGSMYMQQQQPLL-STQDFNMAADIDPQNADVYHHRGQLKI 413

Query: 183 LFGQYEEALRNLDKTIALNPNFHVARAQRHFVVHKMIVPGDRE-RVEQSLKEFRNFVDTH 241
           L  Q EEA+ + D+ I L P   +A+AQ+ F +++    G+   +++ ++K F   +   
Sbjct: 414 LLDQVEEAVADFDECIRLRPESALAQAQKCFALYRQAYTGNNSSQIQAAMKGFEEVIKKF 473

Query: 242 SNVVEACTLFAQVLVDQEDFDGAEEYFNRSIRVDPENASLYVHRAMLMLQARGNVDEAIK 301
               E   L+AQ L DQ+ F  A++ +++ I ++P+NA+ YVH+ +L LQ + ++D  ++
Sbjct: 474 PRCAEGYALYAQALTDQQQFGKADDMYDKCIDLEPDNATTYVHKGLLQLQWKQDLDRGLE 533

Query: 302 LIEKAISIDKSCMFAYETLGTIEVQRGRLEEAVKCFNKALPLARDEAELSHIYSLRDAAI 361
           LI KAI ID  C FAYET+GTIEVQRG +E+A+  FNKA+ LA+ E E++H+YSL DAA 
Sbjct: 534 LISKAIEIDNKCDFAYETMGTIEVQRGNMEKAIDMFNKAINLAKSEMEMAHLYSLCDAAH 593

Query: 362 AQMKVCERYNIK 373
           AQ +V ++Y +K
Sbjct: 594 AQTEVAKKYGLK 605



 Score = 48.1 bits (113), Expect = 0.011,   Method: Compositional matrix adjust.
 Identities = 23/56 (41%), Positives = 33/56 (58%)

Query: 471 DLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQRHFV 526
           D + A  +DP  AD Y+ RGQ+  L  Q EEA+ + D+ I L P   +A+AQ+ F 
Sbjct: 390 DFNMAADIDPQNADVYHHRGQLKILLDQVEEAVADFDECIRLRPESALAQAQKCFA 445


>gi|351710135|gb|EHB13054.1| Mitochondrial import receptor subunit TOM70 [Heterocephalus glaber]
          Length = 609

 Score =  249 bits (636), Expect = 3e-63,   Method: Compositional matrix adjust.
 Identities = 138/372 (37%), Positives = 214/372 (57%), Gaps = 7/372 (1%)

Query: 6   GAQHAKEEISKRSFFKPSKQFIKTYLKSFPNDPILQP---DGLSNGVELTNGDTNESHEL 62
           G + AKE+   R    PS QFIK+Y  SF +D I QP      S+  +   G+  E  E 
Sbjct: 237 GKEKAKEKYKNREPLMPSPQFIKSYFSSFTDDIISQPMLKGEKSDEDKDKEGEALEVKEN 296

Query: 63  DLLSKAKRAFEHEDYLTAIRHCTEEIESTSSNHTKALARLLRATVYIFTSQSTKAIEDLT 122
               KAK+  E E+Y   I  C++E+++      +AL  LLRAT Y+    +  A  DL 
Sbjct: 297 SGYLKAKQYMEEENYDKIISECSKEVDAQGKYMAEAL--LLRATFYLLIGNANAAKPDLD 354

Query: 123 QLVEDTSVDPKIKVNAHIKRAVVHLHAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYC 182
           +++     + K++ NA IKR  +++        +  D + A  +DP  AD Y+ RGQ+  
Sbjct: 355 KVINLKEANVKLRANALIKRGSMYMQQQQPLL-STQDFNMAADIDPQNADVYHHRGQLKI 413

Query: 183 LFGQYEEALRNLDKTIALNPNFHVARAQRHFVVHKMIVPGDRE-RVEQSLKEFRNFVDTH 241
           L  Q EEA+ + D+ I L P   +A+AQ+ F +++    G+   +++ ++K F   +   
Sbjct: 414 LLDQVEEAVTDFDECIRLRPESALAQAQKCFALYRQAYTGNNSSQIQAAMKGFEEVIKKF 473

Query: 242 SNVVEACTLFAQVLVDQEDFDGAEEYFNRSIRVDPENASLYVHRAMLMLQARGNVDEAIK 301
               E   L+AQ L DQ+ F  A+E +++ I ++P+NA+ YVH+ +L LQ + ++D  ++
Sbjct: 474 PRCAEGYALYAQALTDQQQFGKADEMYDKCIDLEPDNATTYVHKGLLQLQWKQDLDRGLE 533

Query: 302 LIEKAISIDKSCMFAYETLGTIEVQRGRLEEAVKCFNKALPLARDEAELSHIYSLRDAAI 361
           LI KAI ID  C FAYET+GTIEVQRG +E A+  FNKA+ LA+ E E++H+YSL DAA 
Sbjct: 534 LISKAIEIDNKCDFAYETMGTIEVQRGNMERAIDMFNKAINLAKSEMEMAHLYSLCDAAH 593

Query: 362 AQMKVCERYNIK 373
           AQ +V ++Y +K
Sbjct: 594 AQTEVAKKYGLK 605



 Score = 48.5 bits (114), Expect = 0.010,   Method: Compositional matrix adjust.
 Identities = 23/56 (41%), Positives = 33/56 (58%)

Query: 471 DLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQRHFV 526
           D + A  +DP  AD Y+ RGQ+  L  Q EEA+ + D+ I L P   +A+AQ+ F 
Sbjct: 390 DFNMAADIDPQNADVYHHRGQLKILLDQVEEAVTDFDECIRLRPESALAQAQKCFA 445


>gi|328782218|ref|XP_001121853.2| PREDICTED: mitochondrial import receptor subunit TOM70 [Apis
           mellifera]
          Length = 576

 Score =  249 bits (636), Expect = 3e-63,   Method: Compositional matrix adjust.
 Identities = 145/382 (37%), Positives = 219/382 (57%), Gaps = 16/382 (4%)

Query: 6   GAQHAKEEISKRSFFKPSKQFIKTYLKSFPNDPILQPDGLSNGVELTNGDTNESHELDLL 65
           G QHA E ++ +    PSK FIKTY+ +F  DP+L      N   L  G           
Sbjct: 208 GRQHAMEYLANKKLVMPSKYFIKTYIITFHKDPVLSNLQDINYNNLPMG----------F 257

Query: 66  SKAKRAFEHEDYLTAIRHCTEEIESTSSN--HTKALARLLRATVYIFTSQSTKAIEDLTQ 123
           +KA +  + ++Y   I  CTE I S+  +    K    LLRAT Y+   Q   A+ED   
Sbjct: 258 AKALKCVKEQEYDDVIPLCTEVINSSEPDILPHKMKVVLLRATFYLLLGQHDAALEDFGT 317

Query: 124 LVEDTSVDPKIKVNAHIKRAVVHLHAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCL 183
           ++ +++V   IKV+A IKRA + +   +   K+F D + A  +DP   D Y+ RG +  L
Sbjct: 318 IINNSTVSKDIKVHALIKRAALFMQLENP-DKSFCDFETAIDLDPECGDIYHHRGHVNLL 376

Query: 184 FGQYEEALRNLDKTIALNPNFHVARAQRHFVVHKM-IVPGDRERVEQSLKEFRNFVDTHS 242
             + +EA  +  K + LNPNF VA  Q+ +  ++  ++   +E VE++++ F N  +   
Sbjct: 377 MEKIDEAREDFKKAVELNPNFGVAYVQKCYADYRYGMMERSKELVEEAMRNFENAFEKFP 436

Query: 243 NVVEACTLFAQVLVDQEDFDGAEEYFNRSIRVDPENASLYVHRAMLMLQARGNVDEAIKL 302
           +  E  TL+AQ+L + +++  A+ YF ++I  DP NA++YVHR +L LQ  G+VD+AI+ 
Sbjct: 437 DCPECYTLYAQMLTELQEYRKADIYFAKAIEKDPCNATVYVHRGLLHLQWNGDVDKAIEY 496

Query: 303 IEKAISIDKSCMFAYETLGTIEVQRGRLEEAVKCFNKALPLARDEAELSHIYSLRDAAIA 362
           I KA+ +D  C + YETLGTIEVQRG +EEA+  F+KAL L R   EL+HI+SLRDAA  
Sbjct: 497 INKALEMDDKCEYGYETLGTIEVQRGNVEEAMNLFDKALALGRTTMELTHIFSLRDAAKT 556

Query: 363 QMKVCERYNIKKKVSPRSQNIT 384
           ++K+ ER  +   V    QNI+
Sbjct: 557 RLKIKER--LGSDVMLNFQNIS 576



 Score = 49.7 bits (117), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 22/59 (37%), Positives = 33/59 (55%)

Query: 467 KAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQRHF 525
           K+F D + A  +DP   D Y+ RG +  L  + +EA  +  K + LNPNF VA  Q+ +
Sbjct: 348 KSFCDFETAIDLDPECGDIYHHRGHVNLLMEKIDEAREDFKKAVELNPNFGVAYVQKCY 406


>gi|281354728|gb|EFB30312.1| hypothetical protein PANDA_005313 [Ailuropoda melanoleuca]
          Length = 573

 Score =  249 bits (635), Expect = 4e-63,   Method: Compositional matrix adjust.
 Identities = 137/372 (36%), Positives = 216/372 (58%), Gaps = 7/372 (1%)

Query: 6   GAQHAKEEISKRSFFKPSKQFIKTYLKSFPNDPILQP---DGLSNGVELTNGDTNESHEL 62
           G + AKE+   R    PS QFIK+Y  SF +D I QP      S+  +   G+ +E  E 
Sbjct: 201 GKEKAKEKYKNREPLMPSPQFIKSYFSSFTDDIISQPMLKGEKSDEDKDKEGEASEVKEN 260

Query: 63  DLLSKAKRAFEHEDYLTAIRHCTEEIESTSSNHTKALARLLRATVYIFTSQSTKAIEDLT 122
               +AK+  E E+Y   I  C++EI++      +AL  LLRAT Y+    +  A  DL 
Sbjct: 261 SGYLRAKQYMEEENYDKIISECSKEIDAQGKYMAEAL--LLRATFYLLIGNANAAKPDLD 318

Query: 123 QLVEDTSVDPKIKVNAHIKRAVVHLHAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYC 182
           +++     + K++ NA IKR  +++        +  D + A  +DP  AD Y+ RGQ+  
Sbjct: 319 KVISLKEANVKLRANALIKRGSMYMQQQQPVL-STQDFNMAADIDPQNADVYHHRGQLKI 377

Query: 183 LFGQYEEALRNLDKTIALNPNFHVARAQRHFVVHKMIVPGDRE-RVEQSLKEFRNFVDTH 241
           L  Q EEA+ + D+ I L P   +A+AQ+ F +++    G+   +++ ++K F   +   
Sbjct: 378 LLDQVEEAVADFDECIRLRPESALAQAQKCFALYRQAYTGNNSSQIQAAMKGFEEVIKKF 437

Query: 242 SNVVEACTLFAQVLVDQEDFDGAEEYFNRSIRVDPENASLYVHRAMLMLQARGNVDEAIK 301
               E   L+AQ L DQ+ F  A++ +++ I ++P+NA+ YVH+ +L LQ + ++D  ++
Sbjct: 438 PKCAEGYALYAQALTDQQQFGKADDMYDKCIDLEPDNATTYVHKGLLQLQWKQDLDRGLE 497

Query: 302 LIEKAISIDKSCMFAYETLGTIEVQRGRLEEAVKCFNKALPLARDEAELSHIYSLRDAAI 361
           LI KAI ID  C FAYET+GTIEVQRG +E+A+  FNKA+ LA+ E E++H+YSL DAA 
Sbjct: 498 LISKAIEIDNKCDFAYETMGTIEVQRGNMEKAIDMFNKAINLAKSEMEMAHLYSLCDAAH 557

Query: 362 AQMKVCERYNIK 373
           AQ +V ++Y +K
Sbjct: 558 AQTEVAKKYGLK 569



 Score = 48.1 bits (113), Expect = 0.012,   Method: Compositional matrix adjust.
 Identities = 23/56 (41%), Positives = 33/56 (58%)

Query: 471 DLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQRHFV 526
           D + A  +DP  AD Y+ RGQ+  L  Q EEA+ + D+ I L P   +A+AQ+ F 
Sbjct: 354 DFNMAADIDPQNADVYHHRGQLKILLDQVEEAVADFDECIRLRPESALAQAQKCFA 409


>gi|114588180|ref|XP_526255.2| PREDICTED: mitochondrial import receptor subunit TOM70 isoform 3
           [Pan troglodytes]
 gi|397502644|ref|XP_003821960.1| PREDICTED: mitochondrial import receptor subunit TOM70 [Pan
           paniscus]
 gi|410227150|gb|JAA10794.1| translocase of outer mitochondrial membrane 70 homolog A [Pan
           troglodytes]
 gi|410262170|gb|JAA19051.1| translocase of outer mitochondrial membrane 70 homolog A [Pan
           troglodytes]
 gi|410297936|gb|JAA27568.1| translocase of outer mitochondrial membrane 70 homolog A [Pan
           troglodytes]
 gi|410349763|gb|JAA41485.1| translocase of outer mitochondrial membrane 70 homolog A [Pan
           troglodytes]
          Length = 608

 Score =  249 bits (635), Expect = 4e-63,   Method: Compositional matrix adjust.
 Identities = 139/372 (37%), Positives = 214/372 (57%), Gaps = 7/372 (1%)

Query: 6   GAQHAKEEISKRSFFKPSKQFIKTYLKSFPNDPILQP---DGLSNGVELTNGDTNESHEL 62
           G + AKE+   R    PS QFIK+Y  SF +D I QP      S+  +   G+  E  E 
Sbjct: 236 GKEKAKEKYKNREPLMPSPQFIKSYFSSFTDDIISQPMLKGEKSDEDKDKEGEALEVKEN 295

Query: 63  DLLSKAKRAFEHEDYLTAIRHCTEEIESTSSNHTKALARLLRATVYIFTSQSTKAIEDLT 122
               KAK+  E E+Y   I  C++EI++      +AL  LLRAT Y+    +  A  DL 
Sbjct: 296 SGYLKAKQYMEEENYDKIISECSKEIDAEGKYMAEAL--LLRATFYLLIGNANAAKPDLD 353

Query: 123 QLVEDTSVDPKIKVNAHIKRAVVHLHAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYC 182
           +++     + K++ NA IKR  + +        +  D + A  +DP  AD Y+ RGQ+  
Sbjct: 354 KVISLKEANVKLRANALIKRGSMFMQQQQPLL-STQDFNMAADIDPQNADVYHHRGQLKI 412

Query: 183 LFGQYEEALRNLDKTIALNPNFHVARAQRHFVVHKMIVPGDRE-RVEQSLKEFRNFVDTH 241
           L  Q EEA+ + D+ I L P   +A+AQ+ F +++    G+   +++ ++K F   +   
Sbjct: 413 LLDQVEEAVADFDECIRLRPESALAQAQKCFALYRQAYTGNNSSQIQAAMKGFEEVIKKF 472

Query: 242 SNVVEACTLFAQVLVDQEDFDGAEEYFNRSIRVDPENASLYVHRAMLMLQARGNVDEAIK 301
               E   L+AQ L DQ+ F  A+E +++ I ++P+NA+ YVH+ +L LQ + ++D  ++
Sbjct: 473 PRCAEGYALYAQALTDQQQFGKADEMYDKCIDLEPDNATTYVHKGLLQLQWKQDLDRGLE 532

Query: 302 LIEKAISIDKSCMFAYETLGTIEVQRGRLEEAVKCFNKALPLARDEAELSHIYSLRDAAI 361
           LI KAI ID  C FAYET+GTIEVQRG +E+A+  FNKA+ LA+ E E++H+YSL DAA 
Sbjct: 533 LISKAIEIDNKCDFAYETMGTIEVQRGNMEKAIDMFNKAINLAKSEMEMAHLYSLCDAAH 592

Query: 362 AQMKVCERYNIK 373
           AQ +V ++Y +K
Sbjct: 593 AQTEVAKKYGLK 604



 Score = 48.1 bits (113), Expect = 0.011,   Method: Compositional matrix adjust.
 Identities = 23/56 (41%), Positives = 33/56 (58%)

Query: 471 DLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQRHFV 526
           D + A  +DP  AD Y+ RGQ+  L  Q EEA+ + D+ I L P   +A+AQ+ F 
Sbjct: 389 DFNMAADIDPQNADVYHHRGQLKILLDQVEEAVADFDECIRLRPESALAQAQKCFA 444


>gi|380019892|ref|XP_003693835.1| PREDICTED: mitochondrial import receptor subunit TOM70-like [Apis
           florea]
          Length = 576

 Score =  249 bits (635), Expect = 4e-63,   Method: Compositional matrix adjust.
 Identities = 145/382 (37%), Positives = 219/382 (57%), Gaps = 16/382 (4%)

Query: 6   GAQHAKEEISKRSFFKPSKQFIKTYLKSFPNDPILQPDGLSNGVELTNGDTNESHELDLL 65
           G QHA E ++ +    PSK FIKTY+ +F  DP+       N   L  G           
Sbjct: 208 GRQHAMEYLANKKLVMPSKYFIKTYIITFHKDPVFSMVQDINYNNLPMG----------F 257

Query: 66  SKAKRAFEHEDYLTAIRHCTEEIESTSSN--HTKALARLLRATVYIFTSQSTKAIEDLTQ 123
           +KA +  + ++Y   I  CTE I S+  +    K    LLRAT Y+   Q   A+ED   
Sbjct: 258 AKALKCVKEQEYDDVIPLCTEIINSSEPDILPYKMKVVLLRATFYLLLGQHDAALEDFGT 317

Query: 124 LVEDTSVDPKIKVNAHIKRAVVHLHAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCL 183
           ++ +++V   IKV+A IKRA + +   +   K+F D D A ++DP   D Y+ RG +  L
Sbjct: 318 IINNSTVLKDIKVHALIKRAALFMQLENP-DKSFCDFDTAIELDPECGDIYHHRGHVNLL 376

Query: 184 FGQYEEALRNLDKTIALNPNFHVARAQRHFVVHKM-IVPGDRERVEQSLKEFRNFVDTHS 242
             + +EA  +  K + LNPNF VA  Q+ +  ++  ++   +E VE++++ F N  +   
Sbjct: 377 MEKIDEAREDFKKAVELNPNFGVAYVQKCYADYRYGMMERSKELVEEAMRNFENAFEKFP 436

Query: 243 NVVEACTLFAQVLVDQEDFDGAEEYFNRSIRVDPENASLYVHRAMLMLQARGNVDEAIKL 302
           +  E  TL+AQ+L + +++  A+ YF ++I  DP NA++YVHR +L LQ  G+VD+AI+ 
Sbjct: 437 DCPECYTLYAQMLTELQEYRKADIYFAKAIEKDPCNATVYVHRGLLHLQWNGDVDKAIEY 496

Query: 303 IEKAISIDKSCMFAYETLGTIEVQRGRLEEAVKCFNKALPLARDEAELSHIYSLRDAAIA 362
           I KA+ +D  C + YETLGTIEVQRG +EEA+  F+KAL L R   EL+HI+SLRDAA  
Sbjct: 497 INKALEMDDKCEYGYETLGTIEVQRGNVEEAMNLFDKALALGRTTMELTHIFSLRDAAKT 556

Query: 363 QMKVCERYNIKKKVSPRSQNIT 384
           ++K+ ER  +   V    QNI+
Sbjct: 557 RLKIKER--LGSDVMLNFQNIS 576



 Score = 52.0 bits (123), Expect = 9e-04,   Method: Compositional matrix adjust.
 Identities = 23/59 (38%), Positives = 34/59 (57%)

Query: 467 KAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQRHF 525
           K+F D D A ++DP   D Y+ RG +  L  + +EA  +  K + LNPNF VA  Q+ +
Sbjct: 348 KSFCDFDTAIELDPECGDIYHHRGHVNLLMEKIDEAREDFKKAVELNPNFGVAYVQKCY 406


>gi|432115603|gb|ELK36875.1| Mitochondrial import receptor subunit TOM70 [Myotis davidii]
          Length = 649

 Score =  248 bits (634), Expect = 4e-63,   Method: Compositional matrix adjust.
 Identities = 139/372 (37%), Positives = 215/372 (57%), Gaps = 7/372 (1%)

Query: 6   GAQHAKEEISKRSFFKPSKQFIKTYLKSFPNDPILQP---DGLSNGVELTNGDTNESHEL 62
           G + AKE+   R    PS QFIK+Y  SF +D I QP      S+  +   G+  E  E 
Sbjct: 277 GKEKAKEKYKNREPLMPSPQFIKSYFSSFTDDIISQPMLKGEKSDEDKDKEGEVLEVKEN 336

Query: 63  DLLSKAKRAFEHEDYLTAIRHCTEEIESTSSNHTKALARLLRATVYIFTSQSTKAIEDLT 122
               KAK+  E E+Y   I  C++EI++      +AL  LLRAT Y+    +  A  DL 
Sbjct: 337 SGYLKAKQYMEEENYDKIISECSKEIDAQGKYMAEAL--LLRATFYLLIGNANAAKPDLD 394

Query: 123 QLVEDTSVDPKIKVNAHIKRAVVHLHAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYC 182
           +++     + K++ NA IKR  +++        +  D + A  +DP  AD Y+ RGQ+  
Sbjct: 395 KVISLKDANVKLRANALIKRGSMYMQQQQPLL-STQDFNMAADIDPQNADVYHHRGQLKI 453

Query: 183 LFGQYEEALRNLDKTIALNPNFHVARAQRHFVVHKMIVPGDRE-RVEQSLKEFRNFVDTH 241
           L  Q EEA+ + D+ I L P   +A+AQ+ F +++    G+   +++ ++K F   +   
Sbjct: 454 LLDQVEEAVADFDECIRLRPESALAQAQKCFALYRQAYTGNNSSQIQAAMKGFEEVIKKF 513

Query: 242 SNVVEACTLFAQVLVDQEDFDGAEEYFNRSIRVDPENASLYVHRAMLMLQARGNVDEAIK 301
               E   L+AQ L DQ+ F  A+E +++ I ++P+NA+ YVH+ +L LQ + ++D  ++
Sbjct: 514 PRCAEGYALYAQALTDQQQFGKADEMYDKCIDLEPDNATTYVHKGLLQLQWKQDLDRGLE 573

Query: 302 LIEKAISIDKSCMFAYETLGTIEVQRGRLEEAVKCFNKALPLARDEAELSHIYSLRDAAI 361
           LI KAI ID  C FAYET+GTIEVQRG +E+A+  FNKA+ LA+ E E++H+YSL DAA 
Sbjct: 574 LISKAIEIDSKCDFAYETMGTIEVQRGNMEKAIDMFNKAINLAKSEMEMAHLYSLCDAAH 633

Query: 362 AQMKVCERYNIK 373
           AQ +V ++Y +K
Sbjct: 634 AQTEVAKKYGLK 645



 Score = 48.1 bits (113), Expect = 0.012,   Method: Compositional matrix adjust.
 Identities = 23/56 (41%), Positives = 33/56 (58%)

Query: 471 DLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQRHFV 526
           D + A  +DP  AD Y+ RGQ+  L  Q EEA+ + D+ I L P   +A+AQ+ F 
Sbjct: 430 DFNMAADIDPQNADVYHHRGQLKILLDQVEEAVADFDECIRLRPESALAQAQKCFA 485


>gi|301763419|ref|XP_002917136.1| PREDICTED: mitochondrial import receptor subunit TOM70-like
           [Ailuropoda melanoleuca]
          Length = 725

 Score =  248 bits (634), Expect = 5e-63,   Method: Compositional matrix adjust.
 Identities = 137/372 (36%), Positives = 216/372 (58%), Gaps = 7/372 (1%)

Query: 6   GAQHAKEEISKRSFFKPSKQFIKTYLKSFPNDPILQP---DGLSNGVELTNGDTNESHEL 62
           G + AKE+   R    PS QFIK+Y  SF +D I QP      S+  +   G+ +E  E 
Sbjct: 353 GKEKAKEKYKNREPLMPSPQFIKSYFSSFTDDIISQPMLKGEKSDEDKDKEGEASEVKEN 412

Query: 63  DLLSKAKRAFEHEDYLTAIRHCTEEIESTSSNHTKALARLLRATVYIFTSQSTKAIEDLT 122
               +AK+  E E+Y   I  C++EI++      +AL  LLRAT Y+    +  A  DL 
Sbjct: 413 SGYLRAKQYMEEENYDKIISECSKEIDAQGKYMAEAL--LLRATFYLLIGNANAAKPDLD 470

Query: 123 QLVEDTSVDPKIKVNAHIKRAVVHLHAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYC 182
           +++     + K++ NA IKR  +++        +  D + A  +DP  AD Y+ RGQ+  
Sbjct: 471 KVISLKEANVKLRANALIKRGSMYMQQQQPVL-STQDFNMAADIDPQNADVYHHRGQLKI 529

Query: 183 LFGQYEEALRNLDKTIALNPNFHVARAQRHFVVHKMIVPGDRE-RVEQSLKEFRNFVDTH 241
           L  Q EEA+ + D+ I L P   +A+AQ+ F +++    G+   +++ ++K F   +   
Sbjct: 530 LLDQVEEAVADFDECIRLRPESALAQAQKCFALYRQAYTGNNSSQIQAAMKGFEEVIKKF 589

Query: 242 SNVVEACTLFAQVLVDQEDFDGAEEYFNRSIRVDPENASLYVHRAMLMLQARGNVDEAIK 301
               E   L+AQ L DQ+ F  A++ +++ I ++P+NA+ YVH+ +L LQ + ++D  ++
Sbjct: 590 PKCAEGYALYAQALTDQQQFGKADDMYDKCIDLEPDNATTYVHKGLLQLQWKQDLDRGLE 649

Query: 302 LIEKAISIDKSCMFAYETLGTIEVQRGRLEEAVKCFNKALPLARDEAELSHIYSLRDAAI 361
           LI KAI ID  C FAYET+GTIEVQRG +E+A+  FNKA+ LA+ E E++H+YSL DAA 
Sbjct: 650 LISKAIEIDNKCDFAYETMGTIEVQRGNMEKAIDMFNKAINLAKSEMEMAHLYSLCDAAH 709

Query: 362 AQMKVCERYNIK 373
           AQ +V ++Y +K
Sbjct: 710 AQTEVAKKYGLK 721



 Score = 48.1 bits (113), Expect = 0.010,   Method: Compositional matrix adjust.
 Identities = 23/56 (41%), Positives = 33/56 (58%)

Query: 471 DLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQRHFV 526
           D + A  +DP  AD Y+ RGQ+  L  Q EEA+ + D+ I L P   +A+AQ+ F 
Sbjct: 506 DFNMAADIDPQNADVYHHRGQLKILLDQVEEAVADFDECIRLRPESALAQAQKCFA 561


>gi|417411224|gb|JAA52057.1| Putative translocase of outer mitochondrial membrane complex
           subunit, partial [Desmodus rotundus]
          Length = 500

 Score =  248 bits (633), Expect = 6e-63,   Method: Compositional matrix adjust.
 Identities = 138/372 (37%), Positives = 214/372 (57%), Gaps = 7/372 (1%)

Query: 6   GAQHAKEEISKRSFFKPSKQFIKTYLKSFPNDPILQP---DGLSNGVELTNGDTNESHEL 62
           G + AKE+   R    PS QFIK+Y  SF +D I QP      S+  +   G+  E  E 
Sbjct: 128 GKEKAKEKYKNREPLMPSPQFIKSYFSSFTDDIISQPTLKGEKSDEDKDKEGEALEVKEN 187

Query: 63  DLLSKAKRAFEHEDYLTAIRHCTEEIESTSSNHTKALARLLRATVYIFTSQSTKAIEDLT 122
               KAK+  E E+Y   I  C++EI++      +AL  LLRAT Y+    +  A  DL 
Sbjct: 188 SGYLKAKQYMEEENYDKIISECSKEIDAQGKYMAEAL--LLRATFYLLIGNANAAKPDLD 245

Query: 123 QLVEDTSVDPKIKVNAHIKRAVVHLHAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYC 182
           +++     + K++ NA IKR  +++        +  D + A  +DP  AD Y+ RGQ+  
Sbjct: 246 KVISLKEANVKLRANALIKRGSMYMQQQQPLL-STQDFNMAADIDPQNADVYHHRGQLKI 304

Query: 183 LFGQYEEALRNLDKTIALNPNFHVARAQRHFVVHKMIVPGDRE-RVEQSLKEFRNFVDTH 241
           L    EEA+ + D+ I L P   +A+AQ+ F +++    G+   +++ ++K F   +   
Sbjct: 305 LLDHVEEAVADFDECIRLRPESALAQAQKCFALYRQAYTGNNSSQIQAAMKGFEEVIKKF 364

Query: 242 SNVVEACTLFAQVLVDQEDFDGAEEYFNRSIRVDPENASLYVHRAMLMLQARGNVDEAIK 301
               E   L+AQ L DQ+ F  A+E +++ I ++P+NA+ YVH+ +L LQ + ++D  ++
Sbjct: 365 PKCAEGYALYAQALTDQQQFGKADEMYDKCIDLEPDNATTYVHKGLLQLQWKQDLDRGLE 424

Query: 302 LIEKAISIDKSCMFAYETLGTIEVQRGRLEEAVKCFNKALPLARDEAELSHIYSLRDAAI 361
           LI KAI ID  C FAYET+GTIEVQRG +E+A+  FNKA+ LA+ E E++H+YSL DAA 
Sbjct: 425 LISKAIEIDSKCDFAYETMGTIEVQRGNMEKAIDMFNKAINLAKSEMEMAHLYSLCDAAH 484

Query: 362 AQMKVCERYNIK 373
           AQ +V ++Y +K
Sbjct: 485 AQTEVAKKYGLK 496



 Score = 46.2 bits (108), Expect = 0.049,   Method: Compositional matrix adjust.
 Identities = 22/56 (39%), Positives = 32/56 (57%)

Query: 471 DLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQRHFV 526
           D + A  +DP  AD Y+ RGQ+  L    EEA+ + D+ I L P   +A+AQ+ F 
Sbjct: 281 DFNMAADIDPQNADVYHHRGQLKILLDHVEEAVADFDECIRLRPESALAQAQKCFA 336


>gi|354485509|ref|XP_003504926.1| PREDICTED: mitochondrial import receptor subunit TOM70-like
           [Cricetulus griseus]
          Length = 506

 Score =  248 bits (633), Expect = 6e-63,   Method: Compositional matrix adjust.
 Identities = 138/372 (37%), Positives = 215/372 (57%), Gaps = 7/372 (1%)

Query: 6   GAQHAKEEISKRSFFKPSKQFIKTYLKSFPNDPILQP---DGLSNGVELTNGDTNESHEL 62
           G ++AKE+   R    PS QFIK+Y  SF +D I QP      S+  +   G+  E  E 
Sbjct: 134 GKENAKEKYKNREPLMPSPQFIKSYFSSFTDDIISQPMLKGEKSDEDKDKEGEALEVKEN 193

Query: 63  DLLSKAKRAFEHEDYLTAIRHCTEEIESTSSNHTKALARLLRATVYIFTSQSTKAIEDLT 122
               KAK+  E E+Y   I  C++EI++      +AL  LLRAT Y+    +  A  DL 
Sbjct: 194 SGYLKAKQYMEEENYDKIISECSKEIDAQGKYMAEAL--LLRATFYLLIGSANSAKPDLD 251

Query: 123 QLVEDTSVDPKIKVNAHIKRAVVHLHAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYC 182
           +++     + K++ NA IKR  + +        +  D + A ++DP  +D Y+ RGQ+  
Sbjct: 252 KVISLKDANVKLRANALIKRGTMCMQQQQPML-STQDFNMAAEIDPQNSDVYHHRGQLKI 310

Query: 183 LFGQYEEALRNLDKTIALNPNFHVARAQRHFVVHKMI-VPGDRERVEQSLKEFRNFVDTH 241
           L    EEA+ + D  I L P F +A+AQ+ F +++      +  +V+ ++K F   +   
Sbjct: 311 LLDLVEEAVADFDACIRLRPKFALAQAQKCFALYRQAYTANNSSQVQAAMKGFEEVIKKF 370

Query: 242 SNVVEACTLFAQVLVDQEDFDGAEEYFNRSIRVDPENASLYVHRAMLMLQARGNVDEAIK 301
               E   L+AQ L DQ+ F  A+E +++ I ++P+NA+ YVH+ +L LQ + ++D+ ++
Sbjct: 371 PRCAEGYALYAQALTDQQQFGKADEMYDKCIDLEPDNATTYVHKGLLQLQWKQDLDKGLE 430

Query: 302 LIEKAISIDKSCMFAYETLGTIEVQRGRLEEAVKCFNKALPLARDEAELSHIYSLRDAAI 361
           LI KAI ID  C FAYET+GTIEVQRG +E+A+  FNKA+ LA+ E E++H+YSL DAA 
Sbjct: 431 LISKAIEIDNKCDFAYETMGTIEVQRGNMEKAIDMFNKAINLAKSEMEMAHLYSLCDAAH 490

Query: 362 AQMKVCERYNIK 373
           AQ +V ++Y +K
Sbjct: 491 AQTEVAKKYGLK 502



 Score = 47.8 bits (112), Expect = 0.013,   Method: Compositional matrix adjust.
 Identities = 22/56 (39%), Positives = 33/56 (58%)

Query: 471 DLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQRHFV 526
           D + A ++DP  +D Y+ RGQ+  L    EEA+ + D  I L P F +A+AQ+ F 
Sbjct: 287 DFNMAAEIDPQNSDVYHHRGQLKILLDLVEEAVADFDACIRLRPKFALAQAQKCFA 342


>gi|344249785|gb|EGW05889.1| Mitochondrial import receptor subunit TOM70 [Cricetulus griseus]
          Length = 384

 Score =  248 bits (633), Expect = 7e-63,   Method: Compositional matrix adjust.
 Identities = 138/372 (37%), Positives = 214/372 (57%), Gaps = 7/372 (1%)

Query: 6   GAQHAKEEISKRSFFKPSKQFIKTYLKSFPNDPILQP---DGLSNGVELTNGDTNESHEL 62
           G ++AKE+   R    PS QFIK+Y  SF +D I QP      S+  +   G+  E  E 
Sbjct: 12  GKENAKEKYKNREPLMPSPQFIKSYFSSFTDDIISQPMLKGEKSDEDKDKEGEALEVKEN 71

Query: 63  DLLSKAKRAFEHEDYLTAIRHCTEEIESTSSNHTKALARLLRATVYIFTSQSTKAIEDLT 122
               KAK+  E E+Y   I  C++EI++      +AL  LLRAT Y+    +  A  DL 
Sbjct: 72  SGYLKAKQYMEEENYDKIISECSKEIDAQGKYMAEAL--LLRATFYLLIGSANSAKPDLD 129

Query: 123 QLVEDTSVDPKIKVNAHIKRAVVHLHAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYC 182
           +++     + K++ NA IKR  + +           D + A ++DP  +D Y+ RGQ+  
Sbjct: 130 KVISLKDANVKLRANALIKRGTMCMQQQQPMLST-QDFNMAAEIDPQNSDVYHHRGQLKI 188

Query: 183 LFGQYEEALRNLDKTIALNPNFHVARAQRHFVVHKMI-VPGDRERVEQSLKEFRNFVDTH 241
           L    EEA+ + D  I L P F +A+AQ+ F +++      +  +V+ ++K F   +   
Sbjct: 189 LLDLVEEAVADFDACIRLRPKFALAQAQKCFALYRQAYTANNSSQVQAAMKGFEEVIKKF 248

Query: 242 SNVVEACTLFAQVLVDQEDFDGAEEYFNRSIRVDPENASLYVHRAMLMLQARGNVDEAIK 301
               E   L+AQ L DQ+ F  A+E +++ I ++P+NA+ YVH+ +L LQ + ++D+ ++
Sbjct: 249 PRCAEGYALYAQALTDQQQFGKADEMYDKCIDLEPDNATTYVHKGLLQLQWKQDLDKGLE 308

Query: 302 LIEKAISIDKSCMFAYETLGTIEVQRGRLEEAVKCFNKALPLARDEAELSHIYSLRDAAI 361
           LI KAI ID  C FAYET+GTIEVQRG +E+A+  FNKA+ LA+ E E++H+YSL DAA 
Sbjct: 309 LISKAIEIDNKCDFAYETMGTIEVQRGNMEKAIDMFNKAINLAKSEMEMAHLYSLCDAAH 368

Query: 362 AQMKVCERYNIK 373
           AQ +V ++Y +K
Sbjct: 369 AQTEVAKKYGLK 380



 Score = 48.1 bits (113), Expect = 0.012,   Method: Compositional matrix adjust.
 Identities = 22/56 (39%), Positives = 33/56 (58%)

Query: 471 DLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQRHFV 526
           D + A ++DP  +D Y+ RGQ+  L    EEA+ + D  I L P F +A+AQ+ F 
Sbjct: 165 DFNMAAEIDPQNSDVYHHRGQLKILLDLVEEAVADFDACIRLRPKFALAQAQKCFA 220


>gi|157113578|ref|XP_001652005.1| heat shock protein 70 (hsp70)-interacting protein [Aedes aegypti]
 gi|157113580|ref|XP_001652006.1| heat shock protein 70 (hsp70)-interacting protein [Aedes aegypti]
 gi|108877651|gb|EAT41876.1| AAEL006531-PA [Aedes aegypti]
 gi|108877652|gb|EAT41877.1| AAEL006531-PB [Aedes aegypti]
          Length = 576

 Score =  248 bits (632), Expect = 8e-63,   Method: Compositional matrix adjust.
 Identities = 139/364 (38%), Positives = 214/364 (58%), Gaps = 16/364 (4%)

Query: 6   GAQHAKEEISKRSFFKPSKQFIKTYLKSFPNDPILQPDGLSNGVELTNGDTNESHELDLL 65
           G QHA+E + ++   +PSK F+K Y  S+ +DPI +                 S E    
Sbjct: 209 GKQHAQEALKEKHNVQPSKFFVKNYFSSYSDDPIKKM-------------VFASTEPKGF 255

Query: 66  SKAKRAFEHEDYLTAIRHCTEEIESTSSN-HTKALARLLRATVYIFTSQSTKAIEDLTQL 124
            KAK   +   Y   I  CTEEIE++ ++   K  A LLRAT Y+ T+   +A  DL  +
Sbjct: 256 VKAKLLLDQGQYEGIIAACTEEIETSEADAEYKIEALLLRATFYLLTASYPEATADLEAV 315

Query: 125 VEDTSVDPKIKVNAHIKRAVVHLHAASDFTK-AFADLDEAEKVDPNVADSYYQRGQIYCL 183
           +     D KI+ NA IKRA + +    +  +  F     AE +DP  +D Y+ RGQ+Y L
Sbjct: 316 IGSELADKKIRSNALIKRASLAMQTQPNTPEECFRYFSMAEDLDPKNSDIYHHRGQVYIL 375

Query: 184 FGQYEEALRNLDKTIALNPNFHVARAQRHFVVHKMIVPG-DRERVEQSLKEFRNFVDTHS 242
             + EEA+ + +K  +L P+  +    R +  +++ +   D   + + +  FRN ++   
Sbjct: 376 IERLEEAIADFEKACSLCPSSGIIEIHRCYASYRLALNNKDEFALRKVMDGFRNAIERFP 435

Query: 243 NVVEACTLFAQVLVDQEDFDGAEEYFNRSIRVDPENASLYVHRAMLMLQARGNVDEAIKL 302
           + VE  +L AQVL DQ++F  A+ ++N++ +++PENA ++VH+A+L LQ   ++  A++L
Sbjct: 436 DCVECYSLMAQVLSDQQEFQEADNFYNKATKIEPENAQIFVHKALLQLQWNADIQAAVEL 495

Query: 303 IEKAISIDKSCMFAYETLGTIEVQRGRLEEAVKCFNKALPLARDEAELSHIYSLRDAAIA 362
           IEKAI ID  C FAYETLGTI+VQRG+L+EA+K F+ A+ LA+ E EL H+YSL+DAAIA
Sbjct: 496 IEKAIQIDDKCEFAYETLGTIQVQRGQLQEAIKLFDSAIKLAKTEMELIHLYSLKDAAIA 555

Query: 363 QMKV 366
           Q+ V
Sbjct: 556 QVNV 559



 Score = 42.0 bits (97), Expect = 0.80,   Method: Compositional matrix adjust.
 Identities = 24/72 (33%), Positives = 40/72 (55%), Gaps = 3/72 (4%)

Query: 475 AEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQRHFVWTSTLAEL 534
           AE +DP  +D Y+ RGQ+Y L  + EEA+ + +K  +L P+  +    R +  +  LA  
Sbjct: 355 AEDLDPKNSDIYHHRGQVYILIERLEEAIADFEKACSLCPSSGIIEIHRCYA-SYRLA-- 411

Query: 535 MAFSDEFMIPKI 546
           +   DEF + K+
Sbjct: 412 LNNKDEFALRKV 423


>gi|41152392|ref|NP_956296.1| mitochondrial import receptor subunit TOM70 [Danio rerio]
 gi|37748059|gb|AAH59538.1| Translocase of outer mitochondrial membrane 70 homolog A (yeast)
           [Danio rerio]
 gi|213627633|gb|AAI71712.1| Translocase of outer mitochondrial membrane 70 homolog A (yeast)
           [Danio rerio]
 gi|213627848|gb|AAI71716.1| Translocase of outer mitochondrial membrane 70 homolog A (yeast)
           [Danio rerio]
          Length = 578

 Score =  247 bits (631), Expect = 9e-63,   Method: Compositional matrix adjust.
 Identities = 140/372 (37%), Positives = 216/372 (58%), Gaps = 7/372 (1%)

Query: 6   GAQHAKEEISKRSFFKPSKQFIKTYLKSFPNDPILQPDGLSNGVELTNGDTNESHELDLL 65
           G + AKE+   R    PS QFIK+Y  SF +D I QP       +       E+ E+   
Sbjct: 206 GKEKAKEKYKNREPLMPSPQFIKSYFSSFTDDIISQPLQKGEKKDEDKDKEGEASEVKGS 265

Query: 66  S---KAKRAFEHEDYLTAIRHCTEEIESTSSNHTKALARLLRATVYIFTSQSTKAIEDLT 122
           S   KAK+  E E+Y   I  CT+EIES      +AL  LLRAT Y+    +T A  DL 
Sbjct: 266 SGYLKAKQYMEEENYDKIISECTKEIESGGRYSAEAL--LLRATFYLLIGNATAAQPDLD 323

Query: 123 QLVEDTSVDPKIKVNAHIKRAVVHLHAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYC 182
           +++       K++ NA IKR  +++        +  D + A ++D   AD Y+ RGQ+  
Sbjct: 324 RVINMNDASVKLRANALIKRGSMYMQQQQPQL-STQDFNMAAEIDHRNADVYHHRGQLKI 382

Query: 183 LFGQYEEALRNLDKTIALNPNFHVARAQRHFVVHKMIVPGDR-ERVEQSLKEFRNFVDTH 241
           L  Q EEA+ + D+ I L P+  +A+AQ+ F +++    G+   +V++++  F + +   
Sbjct: 383 LLDQVEEAVGDFDECIKLRPDSALAQAQKCFALYRQAYTGNNPSQVQKAMDGFEDVIRRF 442

Query: 242 SNVVEACTLFAQVLVDQEDFDGAEEYFNRSIRVDPENASLYVHRAMLMLQARGNVDEAIK 301
               E   L+AQ L DQ+ F  A+E +++ I ++P+NA+ YVH+ +L LQ + +++  ++
Sbjct: 443 PKCAEGYALYAQALTDQQQFGKADEMYDKCIELEPDNATTYVHKGLLQLQWKQDLEMGLE 502

Query: 302 LIEKAISIDKSCMFAYETLGTIEVQRGRLEEAVKCFNKALPLARDEAELSHIYSLRDAAI 361
           LI KAI ID  C FAYET+GTIEVQRG L++A+  FNKA+ LA+ E E++H+YSL DAA 
Sbjct: 503 LISKAIEIDNKCDFAYETMGTIEVQRGNLDKAIDMFNKAINLAKSEMEMAHLYSLCDAAY 562

Query: 362 AQMKVCERYNIK 373
           AQ +V ++Y +K
Sbjct: 563 AQTEVAKKYGLK 574



 Score = 45.1 bits (105), Expect = 0.098,   Method: Compositional matrix adjust.
 Identities = 22/56 (39%), Positives = 34/56 (60%)

Query: 471 DLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQRHFV 526
           D + A ++D   AD Y+ RGQ+  L  Q EEA+ + D+ I L P+  +A+AQ+ F 
Sbjct: 359 DFNMAAEIDHRNADVYHHRGQLKILLDQVEEAVGDFDECIKLRPDSALAQAQKCFA 414


>gi|27552760|ref|NP_613065.2| mitochondrial import receptor subunit TOM70 [Mus musculus]
 gi|342187059|sp|Q9CZW5.2|TOM70_MOUSE RecName: Full=Mitochondrial import receptor subunit TOM70; AltName:
           Full=Mitochondrial precursor proteins import receptor;
           AltName: Full=Translocase of outer membrane 70 kDa
           subunit
 gi|26350647|dbj|BAC38960.1| unnamed protein product [Mus musculus]
 gi|34785646|gb|AAH57096.1| Translocase of outer mitochondrial membrane 70 homolog A (yeast)
           [Mus musculus]
 gi|74211396|dbj|BAE26448.1| unnamed protein product [Mus musculus]
 gi|74219563|dbj|BAE29552.1| unnamed protein product [Mus musculus]
 gi|187951439|gb|AAI39421.1| Translocase of outer mitochondrial membrane 70 homolog A (yeast)
           [Mus musculus]
 gi|187957596|gb|AAI39422.1| Translocase of outer mitochondrial membrane 70 homolog A (yeast)
           [Mus musculus]
          Length = 611

 Score =  247 bits (631), Expect = 1e-62,   Method: Compositional matrix adjust.
 Identities = 138/372 (37%), Positives = 215/372 (57%), Gaps = 7/372 (1%)

Query: 6   GAQHAKEEISKRSFFKPSKQFIKTYLKSFPNDPILQP---DGLSNGVELTNGDTNESHEL 62
           G ++AKE+   R    PS QFIK+Y  SF +D I QP      S+  +   G+  E  E 
Sbjct: 239 GKENAKEKYKNREPLMPSPQFIKSYFSSFTDDIISQPMLKGEKSDEDKDKEGEALEVKEN 298

Query: 63  DLLSKAKRAFEHEDYLTAIRHCTEEIESTSSNHTKALARLLRATVYIFTSQSTKAIEDLT 122
               KAK+  E E+Y   I  C++EI++      +AL  LLRAT Y+    +  A  DL 
Sbjct: 299 SGYLKAKQYMEEENYDKIISECSKEIDAQGKYMAEAL--LLRATFYLLIGSANAAKPDLD 356

Query: 123 QLVEDTSVDPKIKVNAHIKRAVVHLHAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYC 182
           +++     + K++ NA IKR  + +        +  D + A ++DP  +D Y+ RGQ+  
Sbjct: 357 KVISLKEANVKLRANALIKRGTMCMQQQQPML-STQDFNMAAEIDPMNSDVYHHRGQLKI 415

Query: 183 LFGQYEEALRNLDKTIALNPNFHVARAQRHFVVHKMI-VPGDRERVEQSLKEFRNFVDTH 241
           L    EEA+ + D  I L P F +A+AQ+ F +++      +  +V+ ++K F   +   
Sbjct: 416 LLDLVEEAVADFDACIRLRPKFALAQAQKCFALYRQAYTANNSSQVQAAMKGFEEIIKKF 475

Query: 242 SNVVEACTLFAQVLVDQEDFDGAEEYFNRSIRVDPENASLYVHRAMLMLQARGNVDEAIK 301
               E   L+AQ L DQ+ F  A+E +++ I ++P+NA+ YVH+ +L LQ + ++D+ ++
Sbjct: 476 PRCAEGYALYAQALTDQQQFGKADEMYDKCIDLEPDNATTYVHKGLLQLQWKQDLDKGLE 535

Query: 302 LIEKAISIDKSCMFAYETLGTIEVQRGRLEEAVKCFNKALPLARDEAELSHIYSLRDAAI 361
           LI KAI ID  C FAYET+GTIEVQRG +E+A+  FNKA+ LA+ E E++H+YSL DAA 
Sbjct: 536 LISKAIEIDNKCDFAYETMGTIEVQRGNMEKAIDMFNKAINLAKSEMEMAHLYSLCDAAH 595

Query: 362 AQMKVCERYNIK 373
           AQ +V ++Y +K
Sbjct: 596 AQTEVAKKYGLK 607



 Score = 47.4 bits (111), Expect = 0.020,   Method: Compositional matrix adjust.
 Identities = 22/56 (39%), Positives = 33/56 (58%)

Query: 471 DLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQRHFV 526
           D + A ++DP  +D Y+ RGQ+  L    EEA+ + D  I L P F +A+AQ+ F 
Sbjct: 392 DFNMAAEIDPMNSDVYHHRGQLKILLDLVEEAVADFDACIRLRPKFALAQAQKCFA 447


>gi|12848607|dbj|BAB28018.1| unnamed protein product [Mus musculus]
          Length = 611

 Score =  247 bits (631), Expect = 1e-62,   Method: Compositional matrix adjust.
 Identities = 138/372 (37%), Positives = 215/372 (57%), Gaps = 7/372 (1%)

Query: 6   GAQHAKEEISKRSFFKPSKQFIKTYLKSFPNDPILQP---DGLSNGVELTNGDTNESHEL 62
           G ++AKE+   R    PS QFIK+Y  SF +D I QP      S+  +   G+  E  E 
Sbjct: 239 GKENAKEKYKNREPLMPSPQFIKSYFSSFTDDIISQPMLKGEKSDEDKDKEGEALEVKEN 298

Query: 63  DLLSKAKRAFEHEDYLTAIRHCTEEIESTSSNHTKALARLLRATVYIFTSQSTKAIEDLT 122
               KAK+  E E+Y   I  C++EI++      +AL  LLRAT Y+    +  A  DL 
Sbjct: 299 SGYLKAKQYMEEENYDKIISECSKEIDAQGKYMAEAL--LLRATFYLLIGSANAAKPDLD 356

Query: 123 QLVEDTSVDPKIKVNAHIKRAVVHLHAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYC 182
           +++     + K++ NA IKR  + +        +  D + A ++DP  +D Y+ RGQ+  
Sbjct: 357 KVISLKEANVKLRANALIKRGTMCMQQQQPML-STQDFNMAAEIDPMNSDVYHHRGQLKI 415

Query: 183 LFGQYEEALRNLDKTIALNPNFHVARAQRHFVVHKMI-VPGDRERVEQSLKEFRNFVDTH 241
           L    EEA+ + D  I L P F +A+AQ+ F +++      +  +V+ ++K F   +   
Sbjct: 416 LLDLVEEAVADFDACIRLRPKFALAQAQKCFALYRQAYTANNSSQVQAAMKGFEEIIKKF 475

Query: 242 SNVVEACTLFAQVLVDQEDFDGAEEYFNRSIRVDPENASLYVHRAMLMLQARGNVDEAIK 301
               E   L+AQ L DQ+ F  A+E +++ I ++P+NA+ YVH+ +L LQ + ++D+ ++
Sbjct: 476 PRCAEGYALYAQALTDQQQFGKADEMYDKCIDLEPDNATTYVHKGLLQLQWKQDLDKGLE 535

Query: 302 LIEKAISIDKSCMFAYETLGTIEVQRGRLEEAVKCFNKALPLARDEAELSHIYSLRDAAI 361
           LI KAI ID  C FAYET+GTIEVQRG +E+A+  FNKA+ LA+ E E++H+YSL DAA 
Sbjct: 536 LISKAIEIDNKCDFAYETMGTIEVQRGNMEKAIDMFNKAINLAKSEMEMAHLYSLCDAAH 595

Query: 362 AQMKVCERYNIK 373
           AQ +V ++Y +K
Sbjct: 596 AQTEVAKKYGLK 607



 Score = 47.4 bits (111), Expect = 0.020,   Method: Compositional matrix adjust.
 Identities = 22/56 (39%), Positives = 33/56 (58%)

Query: 471 DLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQRHFV 526
           D + A ++DP  +D Y+ RGQ+  L    EEA+ + D  I L P F +A+AQ+ F 
Sbjct: 392 DFNMAAEIDPMNSDVYHHRGQLKILLDLVEEAVADFDACIRLRPKFALAQAQKCFA 447


>gi|47058988|ref|NP_997684.1| mitochondrial import receptor subunit TOM70 [Rattus norvegicus]
 gi|81911805|sp|Q75Q39.1|TOM70_RAT RecName: Full=Mitochondrial import receptor subunit TOM70; AltName:
           Full=Mitochondrial precursor proteins import receptor;
           AltName: Full=Translocase of outer membrane 70 kDa
           subunit
 gi|42733539|dbj|BAD11366.1| TOM70 [Rattus norvegicus]
 gi|68534716|gb|AAH98640.1| Translocase of outer mitochondrial membrane 70 homolog A (S.
           cerevisiae) [Rattus norvegicus]
          Length = 610

 Score =  247 bits (631), Expect = 1e-62,   Method: Compositional matrix adjust.
 Identities = 138/372 (37%), Positives = 215/372 (57%), Gaps = 7/372 (1%)

Query: 6   GAQHAKEEISKRSFFKPSKQFIKTYLKSFPNDPILQP---DGLSNGVELTNGDTNESHEL 62
           G ++AKE+   R    PS QFIK+Y  SF +D I QP      S+  +   G+  E  E 
Sbjct: 238 GKENAKEKYKNREPLMPSPQFIKSYFSSFTDDIISQPMLKGEKSDEDKDKEGEALEVKEN 297

Query: 63  DLLSKAKRAFEHEDYLTAIRHCTEEIESTSSNHTKALARLLRATVYIFTSQSTKAIEDLT 122
               KAK+  E E+Y   I  C++EI++      +AL  LLRAT Y+    +  A  DL 
Sbjct: 298 SGYLKAKQYMEEENYDKIISECSKEIDAQGKYMAEAL--LLRATFYLLIGSANAAKPDLD 355

Query: 123 QLVEDTSVDPKIKVNAHIKRAVVHLHAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYC 182
           +++     + K++ NA IKR  + +        +  D + A ++DP  +D Y+ RGQ+  
Sbjct: 356 KVISLKEANVKLRANALIKRGTMCMQQQQPML-STQDFNMAAEIDPMNSDVYHHRGQLKI 414

Query: 183 LFGQYEEALRNLDKTIALNPNFHVARAQRHFVVHKMI-VPGDRERVEQSLKEFRNFVDTH 241
           L    EEA+ + D  I L P F +A+AQ+ F +++      +  +V+ ++K F   +   
Sbjct: 415 LLDLVEEAVADFDACIRLRPKFALAQAQKCFALYRQAYTANNSSQVQAAMKGFEEVIKKF 474

Query: 242 SNVVEACTLFAQVLVDQEDFDGAEEYFNRSIRVDPENASLYVHRAMLMLQARGNVDEAIK 301
               E   L+AQ L DQ+ F  A+E +++ I ++P+NA+ YVH+ +L LQ + ++D+ ++
Sbjct: 475 PRCAEGYALYAQALTDQQQFGKADEMYDKCIDLEPDNATTYVHKGLLQLQWKQDLDKGLE 534

Query: 302 LIEKAISIDKSCMFAYETLGTIEVQRGRLEEAVKCFNKALPLARDEAELSHIYSLRDAAI 361
           LI KAI ID  C FAYET+GTIEVQRG +E+A+  FNKA+ LA+ E E++H+YSL DAA 
Sbjct: 535 LISKAIEIDNKCDFAYETMGTIEVQRGNMEKAIDMFNKAINLAKSEMEMAHLYSLCDAAH 594

Query: 362 AQMKVCERYNIK 373
           AQ +V ++Y +K
Sbjct: 595 AQTEVAKKYGLK 606



 Score = 47.4 bits (111), Expect = 0.021,   Method: Compositional matrix adjust.
 Identities = 22/56 (39%), Positives = 33/56 (58%)

Query: 471 DLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQRHFV 526
           D + A ++DP  +D Y+ RGQ+  L    EEA+ + D  I L P F +A+AQ+ F 
Sbjct: 391 DFNMAAEIDPMNSDVYHHRGQLKILLDLVEEAVADFDACIRLRPKFALAQAQKCFA 446


>gi|74180003|dbj|BAE36547.1| unnamed protein product [Mus musculus]
          Length = 611

 Score =  247 bits (630), Expect = 1e-62,   Method: Compositional matrix adjust.
 Identities = 138/372 (37%), Positives = 215/372 (57%), Gaps = 7/372 (1%)

Query: 6   GAQHAKEEISKRSFFKPSKQFIKTYLKSFPNDPILQP---DGLSNGVELTNGDTNESHEL 62
           G ++AKE+   R    PS QFIK+Y  SF +D I QP      S+  +   G+  E  E 
Sbjct: 239 GKENAKEKYKNREPLMPSPQFIKSYFSSFTDDIISQPMLKGEKSDEDKDKEGEALEVKEN 298

Query: 63  DLLSKAKRAFEHEDYLTAIRHCTEEIESTSSNHTKALARLLRATVYIFTSQSTKAIEDLT 122
               KAK+  E E+Y   I  C++EI++      +AL  LLRAT Y+    +  A  DL 
Sbjct: 299 SGYLKAKQYMEEENYDKIISECSKEIDAQGKYMAEAL--LLRATFYLLIGSANAAKPDLD 356

Query: 123 QLVEDTSVDPKIKVNAHIKRAVVHLHAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYC 182
           +++     + K++ NA IKR  + +        +  D + A ++DP  +D Y+ RGQ+  
Sbjct: 357 KVISLKEANVKLRANALIKRGTMCMQQQQPIL-STQDFNMAAEIDPMNSDVYHHRGQLKI 415

Query: 183 LFGQYEEALRNLDKTIALNPNFHVARAQRHFVVHKMI-VPGDRERVEQSLKEFRNFVDTH 241
           L    EEA+ + D  I L P F +A+AQ+ F +++      +  +V+ ++K F   +   
Sbjct: 416 LLDLVEEAVADFDACIRLRPKFALAQAQKCFALYRQAYTANNSSQVQAAMKGFEEIIKKF 475

Query: 242 SNVVEACTLFAQVLVDQEDFDGAEEYFNRSIRVDPENASLYVHRAMLMLQARGNVDEAIK 301
               E   L+AQ L DQ+ F  A+E +++ I ++P+NA+ YVH+ +L LQ + ++D+ ++
Sbjct: 476 PRCAEGYALYAQALTDQQQFGKADEMYDKCIDLEPDNATTYVHKGLLQLQWKQDLDKGLE 535

Query: 302 LIEKAISIDKSCMFAYETLGTIEVQRGRLEEAVKCFNKALPLARDEAELSHIYSLRDAAI 361
           LI KAI ID  C FAYET+GTIEVQRG +E+A+  FNKA+ LA+ E E++H+YSL DAA 
Sbjct: 536 LISKAIEIDNKCDFAYETMGTIEVQRGNMEKAIDMFNKAINLAKSEMEMAHLYSLCDAAH 595

Query: 362 AQMKVCERYNIK 373
           AQ +V ++Y +K
Sbjct: 596 AQTEVAKKYGLK 607



 Score = 47.4 bits (111), Expect = 0.020,   Method: Compositional matrix adjust.
 Identities = 22/56 (39%), Positives = 33/56 (58%)

Query: 471 DLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQRHFV 526
           D + A ++DP  +D Y+ RGQ+  L    EEA+ + D  I L P F +A+AQ+ F 
Sbjct: 392 DFNMAAEIDPMNSDVYHHRGQLKILLDLVEEAVADFDACIRLRPKFALAQAQKCFA 447


>gi|28972369|dbj|BAC65638.1| mKIAA0719 protein [Mus musculus]
          Length = 626

 Score =  247 bits (630), Expect = 1e-62,   Method: Compositional matrix adjust.
 Identities = 138/372 (37%), Positives = 215/372 (57%), Gaps = 7/372 (1%)

Query: 6   GAQHAKEEISKRSFFKPSKQFIKTYLKSFPNDPILQP---DGLSNGVELTNGDTNESHEL 62
           G ++AKE+   R    PS QFIK+Y  SF +D I QP      S+  +   G+  E  E 
Sbjct: 254 GKENAKEKYKNREPLMPSPQFIKSYFSSFTDDIISQPMLKGEKSDEDKDKEGEALEVKEN 313

Query: 63  DLLSKAKRAFEHEDYLTAIRHCTEEIESTSSNHTKALARLLRATVYIFTSQSTKAIEDLT 122
               KAK+  E E+Y   I  C++EI++      +AL  LLRAT Y+    +  A  DL 
Sbjct: 314 SGYLKAKQYMEEENYDKIISECSKEIDAQGKYMAEAL--LLRATFYLLIGSANAAKPDLD 371

Query: 123 QLVEDTSVDPKIKVNAHIKRAVVHLHAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYC 182
           +++     + K++ NA IKR  + +        +  D + A ++DP  +D Y+ RGQ+  
Sbjct: 372 KVISLKEANVKLRANALIKRGTMCMQQQQPML-STQDFNMAAEIDPMNSDVYHHRGQLKI 430

Query: 183 LFGQYEEALRNLDKTIALNPNFHVARAQRHFVVHKMI-VPGDRERVEQSLKEFRNFVDTH 241
           L    EEA+ + D  I L P F +A+AQ+ F +++      +  +V+ ++K F   +   
Sbjct: 431 LLDLVEEAVADFDACIRLRPKFALAQAQKCFALYRQAYTANNSSQVQAAMKGFEEIIKKF 490

Query: 242 SNVVEACTLFAQVLVDQEDFDGAEEYFNRSIRVDPENASLYVHRAMLMLQARGNVDEAIK 301
               E   L+AQ L DQ+ F  A+E +++ I ++P+NA+ YVH+ +L LQ + ++D+ ++
Sbjct: 491 PRCAEGYALYAQALTDQQQFGKADEMYDKCIDLEPDNATTYVHKGLLQLQWKQDLDKGLE 550

Query: 302 LIEKAISIDKSCMFAYETLGTIEVQRGRLEEAVKCFNKALPLARDEAELSHIYSLRDAAI 361
           LI KAI ID  C FAYET+GTIEVQRG +E+A+  FNKA+ LA+ E E++H+YSL DAA 
Sbjct: 551 LISKAIEIDNKCDFAYETMGTIEVQRGNMEKAIDMFNKAINLAKSEMEMAHLYSLCDAAH 610

Query: 362 AQMKVCERYNIK 373
           AQ +V ++Y +K
Sbjct: 611 AQTEVAKKYGLK 622



 Score = 47.4 bits (111), Expect = 0.020,   Method: Compositional matrix adjust.
 Identities = 22/56 (39%), Positives = 33/56 (58%)

Query: 471 DLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQRHFV 526
           D + A ++DP  +D Y+ RGQ+  L    EEA+ + D  I L P F +A+AQ+ F 
Sbjct: 407 DFNMAAEIDPMNSDVYHHRGQLKILLDLVEEAVADFDACIRLRPKFALAQAQKCFA 462


>gi|345310581|ref|XP_001518993.2| PREDICTED: mitochondrial import receptor subunit TOM70-like
           [Ornithorhynchus anatinus]
          Length = 626

 Score =  246 bits (629), Expect = 2e-62,   Method: Compositional matrix adjust.
 Identities = 139/374 (37%), Positives = 214/374 (57%), Gaps = 11/374 (2%)

Query: 6   GAQHAKEEISKRSFFKPSKQFIKTYLKSFPNDPILQPDGLSNGVELTNGDTNESHELDL- 64
           G + AK++   R    PS QFIK+Y  SF +D I QP  L  G +       E   L++ 
Sbjct: 254 GKEKAKDKYKNREPLMPSPQFIKSYFSSFTDDIISQP--LLKGEKSDEDKDKEGEALEVK 311

Query: 65  ----LSKAKRAFEHEDYLTAIRHCTEEIESTSSNHTKALARLLRATVYIFTSQSTKAIED 120
                 KAK+  E E+Y   I  CT+EI+       +AL  LLRAT Y+    +  A  D
Sbjct: 312 ENSGYLKAKQYMEEENYDKIISECTKEIDMHGKYMAEAL--LLRATFYLLIGNANAAKPD 369

Query: 121 LTQLVEDTSVDPKIKVNAHIKRAVVHLHAASDFTKAFADLDEAEKVDPNVADSYYQRGQI 180
           L  ++     + K++ NA IKR  +++           D + A   DP  AD Y+ RGQ+
Sbjct: 370 LDHVISLQDANVKLRANALIKRGSMYMQQQQPLLST-QDFNMAADTDPQNADVYHHRGQL 428

Query: 181 YCLFGQYEEALRNLDKTIALNPNFHVARAQRHFVVHKMIVPGDRE-RVEQSLKEFRNFVD 239
             L  Q EEA+ + D+ I L P+  +A+AQ+ F +++    G+   +V+ +++ F   ++
Sbjct: 429 KILLDQVEEAVADFDECIRLRPDSALAQAQKCFALYRQAYTGNNSSQVQAAMQGFEEVIN 488

Query: 240 THSNVVEACTLFAQVLVDQEDFDGAEEYFNRSIRVDPENASLYVHRAMLMLQARGNVDEA 299
                 E   LFAQ L DQ+ F  A+E +++ I ++P+NA+ YVH+ +L LQ + ++D+ 
Sbjct: 489 RFPRCAEGYALFAQALTDQQQFGKADEMYDKCIVLEPDNATTYVHKGLLQLQWKQDLDKG 548

Query: 300 IKLIEKAISIDKSCMFAYETLGTIEVQRGRLEEAVKCFNKALPLARDEAELSHIYSLRDA 359
           ++LI KAI ID  C FAYET+GTIEVQRG +++A+  FNKA+ LA+ E E++H+YSL DA
Sbjct: 549 LELISKAIEIDNKCDFAYETMGTIEVQRGNMDKAIDMFNKAINLAKSEMEMAHLYSLCDA 608

Query: 360 AIAQMKVCERYNIK 373
           A AQ +V ++Y +K
Sbjct: 609 AYAQTEVAKKYGLK 622



 Score = 47.4 bits (111), Expect = 0.018,   Method: Compositional matrix adjust.
 Identities = 23/55 (41%), Positives = 33/55 (60%)

Query: 471 DLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQRHF 525
           D + A   DP  AD Y+ RGQ+  L  Q EEA+ + D+ I L P+  +A+AQ+ F
Sbjct: 407 DFNMAADTDPQNADVYHHRGQLKILLDQVEEAVADFDECIRLRPDSALAQAQKCF 461


>gi|348530244|ref|XP_003452621.1| PREDICTED: mitochondrial import receptor subunit TOM70-like
           [Oreochromis niloticus]
 gi|348543483|ref|XP_003459213.1| PREDICTED: mitochondrial import receptor subunit TOM70-like
           [Oreochromis niloticus]
          Length = 578

 Score =  245 bits (626), Expect = 4e-62,   Method: Compositional matrix adjust.
 Identities = 139/372 (37%), Positives = 213/372 (57%), Gaps = 7/372 (1%)

Query: 6   GAQHAKEEISKRSFFKPSKQFIKTYLKSFPNDPILQPDGLSNGVELTNGDTNESHELDLL 65
           G + AKE+   R    PS QFIK+Y  SF +D I QP       +       E+ E+   
Sbjct: 206 GKEKAKEKYKNREPMMPSPQFIKSYFSSFTDDIISQPLQKGEKKDEDKDKEGEAAEVSES 265

Query: 66  S---KAKRAFEHEDYLTAIRHCTEEIESTSSNHTKALARLLRATVYIFTSQSTKAIEDLT 122
           S   KAK+  E E+Y   I  CT+EIES      +AL  LLRAT Y+    ST A  DL 
Sbjct: 266 SGYLKAKQYMEEENYDKIISECTKEIESGGRYTAEAL--LLRATFYLLIGNSTAAQPDLD 323

Query: 123 QLVEDTSVDPKIKVNAHIKRAVVHLHAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYC 182
           +++     + K++ NA IKR  +++        +  D + A ++D    D Y+ RGQ+  
Sbjct: 324 RVINMQDANVKLRANALIKRGSMYMQQQQPVL-STQDFNMAAEIDTRNPDVYHHRGQLKI 382

Query: 183 LFGQYEEALRNLDKTIALNPNFHVARAQRHFVVHKMIVPGDR-ERVEQSLKEFRNFVDTH 241
           L  Q +EA+ + D+ I L P+  +A+AQ+ F +++    G    +++ ++  F + +   
Sbjct: 383 LLDQVDEAVVDFDQCILLRPDSALAQAQKCFALYRQAYTGSNISQIQTAMDGFEDVIRRF 442

Query: 242 SNVVEACTLFAQVLVDQEDFDGAEEYFNRSIRVDPENASLYVHRAMLMLQARGNVDEAIK 301
               E   L+AQ L DQ+ F  A+E +++ I ++P+NA+ YVH+ +L LQ + ++D  + 
Sbjct: 443 PKCAEGYALYAQALTDQQQFGKADEMYDKCIELEPDNATTYVHKGLLQLQWKQDLDLGLD 502

Query: 302 LIEKAISIDKSCMFAYETLGTIEVQRGRLEEAVKCFNKALPLARDEAELSHIYSLRDAAI 361
           LI KAI ID  C FAYET+GTIEVQRG L++A++ FNKA+ LA+ E E++H+YSL DAA 
Sbjct: 503 LISKAIEIDNKCDFAYETMGTIEVQRGNLDKAIEMFNKAINLAKSEMEMAHLYSLCDAAY 562

Query: 362 AQMKVCERYNIK 373
           AQ +V  +Y +K
Sbjct: 563 AQTEVARKYGLK 574



 Score = 42.4 bits (98), Expect = 0.68,   Method: Compositional matrix adjust.
 Identities = 20/56 (35%), Positives = 33/56 (58%)

Query: 471 DLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQRHFV 526
           D + A ++D    D Y+ RGQ+  L  Q +EA+ + D+ I L P+  +A+AQ+ F 
Sbjct: 359 DFNMAAEIDTRNPDVYHHRGQLKILLDQVDEAVVDFDQCILLRPDSALAQAQKCFA 414


>gi|195435350|ref|XP_002065657.1| GK14555 [Drosophila willistoni]
 gi|194161742|gb|EDW76643.1| GK14555 [Drosophila willistoni]
          Length = 598

 Score =  241 bits (615), Expect = 7e-61,   Method: Compositional matrix adjust.
 Identities = 139/380 (36%), Positives = 222/380 (58%), Gaps = 20/380 (5%)

Query: 1   MFMDR-----GAQHAKEEISKRSFFKPSKQFIKTYLKSFPNDPILQPD-GLSNGVELTNG 54
           MF DR     G   A+  +  R    PS  F+ TY++SF  DP+ + D   S+G  L   
Sbjct: 212 MFADRILKETGRVDAQASMKNRKPIVPSTSFVNTYMRSFIADPLQRTDLPKSDGAPLRG- 270

Query: 55  DTNESHELDLLSKAKRAFEHEDYLTAIRHCTEEIESTSSN-HTKALARLLRATVYIFTSQ 113
                       KA++AF+ E +   I  CTEEIES+ +    K  A LLR T ++    
Sbjct: 271 ----------FLKARQAFDDEKFDEIIPACTEEIESSEAESQYKVEALLLRGTFHLLCGS 320

Query: 114 STKAIEDLTQLVEDTSVDPKIKVNAHIKRAVVHLHAASDFTKAFADLDEAEKVDPNVADS 173
             +  +D   ++E+   D  ++  A++KRA + +    D  +  AD D+AEK++P  AD 
Sbjct: 321 YEECKQDFNAIIENDDADANLRAYAYMKRAALFIQL-EDREQGLADFDKAEKLNPKNADL 379

Query: 174 YYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQRHFVVHKM-IVPGDRERVEQSLK 232
           Y+QR QI  L    E AL   DK ++L P+  +A  QR +  +++ ++ GD++R+E  ++
Sbjct: 380 YHQRAQILLLLEHIEPALAEFDKAVSLAPDHAIALVQRCYAEYRLALLSGDQKRLESVMR 439

Query: 233 EFRNFVDTHSNVVEACTLFAQVLVDQEDFDGAEEYFNRSIRVDPENASLYVHRAMLMLQA 292
            F   ++   + VE  +L AQVL DQ+ F  A +Y+++++++ P N +L VH+A++MLQ 
Sbjct: 440 SFEQAIEKFPDCVECYSLMAQVLADQQQFPQAHQYYDKAMKLAPTNPALIVHQAIMMLQW 499

Query: 293 RGNVDEAIKLIEKAISIDKSCMFAYETLGTIEVQRGRLEEAVKCFNKALPLARDEAELSH 352
           RG++++A++L+E AI +D  C  AYETLGT+EVQR  L  AV+ F KAL  ++ +AEL H
Sbjct: 500 RGDIEKAVQLLEHAIEVDPKCELAYETLGTVEVQRAHLTRAVELFEKALIYSKSQAELVH 559

Query: 353 IYSLRDAAIAQMKVCERYNI 372
           +YSLR+AA+AQ+ V ++  I
Sbjct: 560 VYSLRNAALAQINVTKKLGI 579



 Score = 56.6 bits (135), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 37/105 (35%), Positives = 49/105 (46%), Gaps = 5/105 (4%)

Query: 427 LNSNDYEIIPGDPTKTIEESEKYGNLENESGQKHAA-----SDFTKAFADLDEAEKVDPN 481
           L    YE    D    IE  +   NL   +  K AA      D  +  AD D+AEK++P 
Sbjct: 316 LLCGSYEECKQDFNAIIENDDADANLRAYAYMKRAALFIQLEDREQGLADFDKAEKLNPK 375

Query: 482 VADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQRHFV 526
            AD Y+QR QI  L    E AL   DK ++L P+  +A  QR + 
Sbjct: 376 NADLYHQRAQILLLLEHIEPALAEFDKAVSLAPDHAIALVQRCYA 420


>gi|307167322|gb|EFN60967.1| Mitochondrial import receptor subunit TOM70 [Camponotus floridanus]
          Length = 591

 Score =  240 bits (613), Expect = 1e-60,   Method: Compositional matrix adjust.
 Identities = 136/381 (35%), Positives = 213/381 (55%), Gaps = 25/381 (6%)

Query: 6   GAQHAKEEISKRSFFKPSKQFIKTYLKSFPNDPILQPDGLSNGVELTNGDTNESHELDL- 64
           G QHA+E ++ + F  PSK FIKTY+ SFPNDP+                T   H  D+ 
Sbjct: 219 GKQHAQENLANKKFIMPSKHFIKTYIMSFPNDPVF---------------TRLQHSEDIP 263

Query: 65  --LSKAKRAFEHEDYLTAIRHCTEEIESTSSN---HTKALARLLRATVYIFTSQSTKAIE 119
               K  +A + E+Y   I  CTE I+S+  N    +K    LLRAT ++   +   AI+
Sbjct: 264 QFFKKPLQALKDEEYDDIIPLCTEVIKSSEFNILPSSKMEVLLLRATFHLLLGEYDAAIQ 323

Query: 120 DLTQLVEDTSVDPKIKVNAHIKRAVVHLHAAS-DFTKAFADLDEAEKVDPNVADSYYQRG 178
           D   ++        +KVNA IKRA +++   + D T  F D + A  ++P   D Y+ RG
Sbjct: 324 DFESILNSEETSKDVKVNALIKRATLYMQLENPDMT--FKDFELAISINPKYGDIYHHRG 381

Query: 179 QIYCLFGQYEEALRNLDKTIALNPNFHVARAQRHFVVHKM-IVPGDRERVEQSLKEFRNF 237
           Q+  L  + +EA  + +K I  NP+F +A  Q+ +  ++  I   D    E+++K+F   
Sbjct: 382 QLNLLMHKMDEAKSDYEKAIHYNPDFGIAYVQKCYTDYRFAIFNRDVRLAEEAMKDFEKA 441

Query: 238 VDTHSNVVEACTLFAQVLVDQEDFDGAEEYFNRSIRVDPENASLYVHRAMLMLQARGNVD 297
                +  E   L+AQ++ + + +D A+ YF ++I  DP+NA++YVH+ +L LQ  GN+D
Sbjct: 442 FIKFPDRSECYMLYAQMMAETQQYDKADMYFAKAIEKDPKNATIYVHKGLLQLQWNGNID 501

Query: 298 EAIKLIEKAISIDKSCMFAYETLGTIEVQRGRLEEAVKCFNKALPLARDEAELSHIYSLR 357
           +A++   KA+  D+ C  AYE+LG+IEVQRG + EA++ F+KAL L R   EL+H+YSLR
Sbjct: 502 KAVEYFRKALETDEKCEHAYESLGSIEVQRGNIREAIRLFDKALELCRTSMELAHLYSLR 561

Query: 358 DAAIAQMKVCERYNIKKKVSP 378
           DAA  Q+ +  R  ++   +P
Sbjct: 562 DAAQTQLNLQNRLGMEGIRTP 582



 Score = 42.4 bits (98), Expect = 0.62,   Method: Compositional matrix adjust.
 Identities = 19/58 (32%), Positives = 32/58 (55%)

Query: 469 FADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQRHFV 526
           F D + A  ++P   D Y+ RGQ+  L  + +EA  + +K I  NP+F +A  Q+ + 
Sbjct: 360 FKDFELAISINPKYGDIYHHRGQLNLLMHKMDEAKSDYEKAIHYNPDFGIAYVQKCYT 417


>gi|21392176|gb|AAM48442.1| RE66761p [Drosophila melanogaster]
          Length = 589

 Score =  240 bits (613), Expect = 1e-60,   Method: Compositional matrix adjust.
 Identities = 138/379 (36%), Positives = 216/379 (56%), Gaps = 17/379 (4%)

Query: 1   MFMDR-----GAQHAKEEISKRSFFKPSKQFIKTYLKSFPNDPILQPDGLSNGVELTNGD 55
           MF DR     G   A++ +  R    PS  F+ TY +SF  DP+      +  V     D
Sbjct: 202 MFADRVLKETGRLDAEKGMRNRVPVVPSACFVNTYTRSFIADPLQ-----TMKVPAPKSD 256

Query: 56  TNESHELDLLSKAKRAFEHEDYLTAIRHCTEEIESTSSN-HTKALARLLRATVYIFTSQS 114
                 L    +A  AF  E Y   I  CTEEIES+ +    K  A L+R T ++     
Sbjct: 257 APPKGFL----RAHLAFLEEKYEEIIPACTEEIESSEAEVQYKVEALLMRGTFHLLCGSY 312

Query: 115 TKAIEDLTQLVEDTSVDPKIKVNAHIKRAVVHLHAASDFTKAFADLDEAEKVDPNVADSY 174
            ++ +D   ++ +   DP ++  A+IKRA +++       K  AD  EAE+++P   D Y
Sbjct: 313 VESQQDFDAIIANDYADPNLRAYAYIKRAALYIQL-DQREKGIADFAEAERLNPENPDVY 371

Query: 175 YQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQRHFVVHKM-IVPGDRERVEQSLKE 233
           +QR QI  L  Q E AL   +K +++ PN  +A  Q+ +  +++ ++ GD+ R+E  +  
Sbjct: 372 HQRAQILLLLEQIEPALAEFEKAVSIAPNHAIAFVQKCYAEYRLSLLAGDQRRLESVMHT 431

Query: 234 FRNFVDTHSNVVEACTLFAQVLVDQEDFDGAEEYFNRSIRVDPENASLYVHRAMLMLQAR 293
           F+N ++   + VE  +L AQVL DQ+ F  AEEY+ +++ + P N +L VH+A+++LQ R
Sbjct: 432 FQNAIERFPSCVECYSLTAQVLADQQQFTQAEEYYKKAMVLAPTNPALIVHQAIMVLQWR 491

Query: 294 GNVDEAIKLIEKAISIDKSCMFAYETLGTIEVQRGRLEEAVKCFNKALPLARDEAELSHI 353
           G+++ A++L+ KAI +D  C  AYETLGT+EVQR +L  AV+ F KAL  A+ +AEL H+
Sbjct: 492 GDINLAVQLLNKAIEVDPKCELAYETLGTVEVQRAQLTRAVELFEKALLYAKSQAELVHV 551

Query: 354 YSLRDAAIAQMKVCERYNI 372
           YSLR+AA+AQ+ V ++  I
Sbjct: 552 YSLRNAAVAQINVTKKLGI 570



 Score = 49.7 bits (117), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 23/59 (38%), Positives = 34/59 (57%)

Query: 467 KAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQRHF 525
           K  AD  EAE+++P   D Y+QR QI  L  Q E AL   +K +++ PN  +A  Q+ +
Sbjct: 352 KGIADFAEAERLNPENPDVYHQRAQILLLLEQIEPALAEFEKAVSIAPNHAIAFVQKCY 410


>gi|332016397|gb|EGI57310.1| Mitochondrial import receptor subunit TOM70 [Acromyrmex echinatior]
          Length = 588

 Score =  239 bits (611), Expect = 2e-60,   Method: Compositional matrix adjust.
 Identities = 137/381 (35%), Positives = 220/381 (57%), Gaps = 34/381 (8%)

Query: 6   GAQHAKEEISKRSFFKPSKQFIKTYLKSFPNDPIL----QPDGLSNGVELTNGDTNESHE 61
           G QHA+E ++ + F  PSK FIKTY+ SFP DP+      P+ +                
Sbjct: 213 GRQHAQENLANKKFVMPSKHFIKTYIISFPKDPVFSRLEHPENIP--------------- 257

Query: 62  LDLLSKAKRAFEHEDYLTAIRHCTE-----EIESTSSNHTKALARLLRATVYIFTSQSTK 116
            + L K  +A ++ +Y   I  CTE     E +  SS+  + L  LLRAT Y+   +   
Sbjct: 258 -EFLKKPLQAVKNMEYDDIIPLCTEIIKNPEFDMLSSSRLEVL--LLRATFYLLLGEHDA 314

Query: 117 AIEDLTQLVEDTSVDPKIKVNAHIKRAVVHLHAAS-DFTKAFADLDEAEKVDPNVADSYY 175
            I+D   ++        +++NA IKRA +++   + D T  F D + A  ++P+ +D Y+
Sbjct: 315 TIKDFENILNSKDASDDVRINALIKRAALYMQLDNPDMT--FKDFELAISMNPSYSDIYH 372

Query: 176 QRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQRHFVVHKMIVPG-DRERVEQSLKEF 234
            RGQ+  L G+ +EA R+ +K +  NPNF +A AQ+ +  ++  V   D    E ++K+F
Sbjct: 373 HRGQVNLLMGRIDEAKRDFEKAVEYNPNFGIAYAQKCYTDYRFAVFNRDIGLAEVAVKDF 432

Query: 235 RNFVDTHSNVVEA--CTL-FAQVLVDQEDFDGAEEYFNRSIRVDPENASLYVHRAMLMLQ 291
              ++ + N  E   C + +AQ++ + + F+ A+ Y+ +++  DP+NA++YVHR +L LQ
Sbjct: 433 ERALEKYPNPPECIYCYISYAQMMSETQQFEKADTYYAKALEQDPDNATVYVHRGLLQLQ 492

Query: 292 ARGNVDEAIKLIEKAISIDKSCMFAYETLGTIEVQRGRLEEAVKCFNKALPLARDEAELS 351
             GNVD+ ++ I KA+ +D+ C  AYE+LG+IEVQRG +EEA++ F+KAL L R   EL+
Sbjct: 493 WNGNVDKTVEYIHKALELDEKCELAYESLGSIEVQRGNIEEAIRLFDKALVLCRTFMELT 552

Query: 352 HIYSLRDAAIAQMKVCERYNI 372
           HIYSLRDAA AQ+ +  R  +
Sbjct: 553 HIYSLRDAAKAQLNIKNRLGM 573



 Score = 52.0 bits (123), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 22/58 (37%), Positives = 37/58 (63%)

Query: 469 FADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQRHFV 526
           F D + A  ++P+ +D Y+ RGQ+  L G+ +EA R+ +K +  NPNF +A AQ+ + 
Sbjct: 354 FKDFELAISMNPSYSDIYHHRGQVNLLMGRIDEAKRDFEKAVEYNPNFGIAYAQKCYT 411


>gi|195472283|ref|XP_002088430.1| GE12522 [Drosophila yakuba]
 gi|194174531|gb|EDW88142.1| GE12522 [Drosophila yakuba]
          Length = 590

 Score =  237 bits (604), Expect = 1e-59,   Method: Compositional matrix adjust.
 Identities = 139/379 (36%), Positives = 221/379 (58%), Gaps = 16/379 (4%)

Query: 1   MFMDR-----GAQHAKEEISKRSFFKPSKQFIKTYLKSFPNDPILQPDGLSNGVELTNGD 55
           MF DR     G   A++ +  R    PS  F+ TY +SF  DP+         +E+    
Sbjct: 202 MFADRVLKETGRVDAEKGMRNRVAIVPSACFVNTYTRSFIADPL-------QTMEVPVPS 254

Query: 56  TNESHELDLLSKAKRAFEHEDYLTAIRHCTEEIESTSSN-HTKALARLLRATVYIFTSQS 114
            +++     L +A RAF  E Y   I  CTEEIES+ +    K  A LLR T ++     
Sbjct: 255 ESDAPTKGFL-RAHRAFLKEKYEEIIPACTEEIESSEAEAQYKVEALLLRGTFHLLCGSY 313

Query: 115 TKAIEDLTQLVEDTSVDPKIKVNAHIKRAVVHLHAASDFTKAFADLDEAEKVDPNVADSY 174
            ++ +D   ++ +   DP ++  A+IKRA + +       K  AD DEAE+++P   D Y
Sbjct: 314 AESQQDFDAILANADADPNLRAYAYIKRAALFIQL-DQREKGLADFDEAERLNPENPDVY 372

Query: 175 YQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQRHFVVHKM-IVPGDRERVEQSLKE 233
           +QR QI  L  Q E AL   +K + + P+  +A  Q+ +  +++ ++ GD+ R+E  +  
Sbjct: 373 HQRAQILLLLEQIEPALAEFEKAVRIAPDHAIAFVQKCYAEYRLSLLAGDQRRLESVMHT 432

Query: 234 FRNFVDTHSNVVEACTLFAQVLVDQEDFDGAEEYFNRSIRVDPENASLYVHRAMLMLQAR 293
           F+N +D   + VE  +L AQVL DQ+ F  A+EY+ +++++ P N +L VH+A+++LQ R
Sbjct: 433 FQNAIDRFPSCVECYSLMAQVLADQQQFPQAQEYYEKAMKLAPTNPALIVHQAIMVLQWR 492

Query: 294 GNVDEAIKLIEKAISIDKSCMFAYETLGTIEVQRGRLEEAVKCFNKALPLARDEAELSHI 353
           G+++ A++L+ KAI +D  C  AYETLGT+EVQR +L+ AV+ F KAL  A+ +AEL H+
Sbjct: 493 GDIEMAVQLLNKAIEVDPKCELAYETLGTVEVQRAQLKRAVELFEKALLYAKSQAELVHV 552

Query: 354 YSLRDAAIAQMKVCERYNI 372
           YSLR+AA+AQ+ V ++  I
Sbjct: 553 YSLRNAAVAQINVTKKLGI 571



 Score = 49.7 bits (117), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 23/59 (38%), Positives = 34/59 (57%)

Query: 467 KAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQRHF 525
           K  AD DEAE+++P   D Y+QR QI  L  Q E AL   +K + + P+  +A  Q+ +
Sbjct: 353 KGLADFDEAERLNPENPDVYHQRAQILLLLEQIEPALAEFEKAVRIAPDHAIAFVQKCY 411


>gi|194861421|ref|XP_001969780.1| GG10284 [Drosophila erecta]
 gi|190661647|gb|EDV58839.1| GG10284 [Drosophila erecta]
          Length = 590

 Score =  236 bits (601), Expect = 3e-59,   Method: Compositional matrix adjust.
 Identities = 138/379 (36%), Positives = 220/379 (58%), Gaps = 16/379 (4%)

Query: 1   MFMDR-----GAQHAKEEISKRSFFKPSKQFIKTYLKSFPNDPILQPDGLSNGVELTNGD 55
           MF DR     G   A++ +  R    PS  F+ TY +SF  DP+         +E+    
Sbjct: 202 MFADRVLKETGRVDAEKGMRDRVPVVPSACFVNTYTRSFIADPL-------QTMEVPVSS 254

Query: 56  TNESHELDLLSKAKRAFEHEDYLTAIRHCTEEIESTSSN-HTKALARLLRATVYIFTSQS 114
            +++     L +A RAF  E Y   I  CTEEIES+ +    K  A LLR T ++     
Sbjct: 255 KSDAPPKGFL-RAHRAFLEEKYEEIIPACTEEIESSEAEAQYKVEALLLRGTFHLLCGSY 313

Query: 115 TKAIEDLTQLVEDTSVDPKIKVNAHIKRAVVHLHAASDFTKAFADLDEAEKVDPNVADSY 174
           T++ +D   ++ +   DP ++  A+IKRA + +       K  AD DEAE+++P   D Y
Sbjct: 314 TESQQDFDAILANADADPNLRAYAYIKRAALFIQL-DQRDKCLADFDEAERLNPENPDVY 372

Query: 175 YQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQRHFVVHKM-IVPGDRERVEQSLKE 233
           +QR QI  L  Q   AL   +K + + PN  +A  Q+ +  +++ ++ GD  R+E  +  
Sbjct: 373 HQRAQILLLLEQIGPALAEFEKAVRIAPNHAIALVQKCYAEYRLSLLAGDERRLESVMHN 432

Query: 234 FRNFVDTHSNVVEACTLFAQVLVDQEDFDGAEEYFNRSIRVDPENASLYVHRAMLMLQAR 293
           F+N ++   + VE  +L AQ+L DQ+ F  A+EY+ +++++ P N +L VH+A+++LQ R
Sbjct: 433 FQNAIERFPSCVECYSLMAQMLADQQQFSQAQEYYTKAMKLAPTNPALIVHQAIMVLQWR 492

Query: 294 GNVDEAIKLIEKAISIDKSCMFAYETLGTIEVQRGRLEEAVKCFNKALPLARDEAELSHI 353
           G+++ A++L+ KAI +D  C  AYETLGT+EVQR +L+ AV+ F KAL  A+ +AEL H+
Sbjct: 493 GDIEVAVQLLNKAIEVDPKCELAYETLGTVEVQRAQLQRAVELFEKALLYAKSQAELVHV 552

Query: 354 YSLRDAAIAQMKVCERYNI 372
           YSLR+AA+AQ+ V ++  I
Sbjct: 553 YSLRNAAVAQINVTKKLGI 571



 Score = 49.3 bits (116), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 23/59 (38%), Positives = 33/59 (55%)

Query: 467 KAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQRHF 525
           K  AD DEAE+++P   D Y+QR QI  L  Q   AL   +K + + PN  +A  Q+ +
Sbjct: 353 KCLADFDEAERLNPENPDVYHQRAQILLLLEQIGPALAEFEKAVRIAPNHAIALVQKCY 411


>gi|158288319|ref|XP_310198.4| AGAP009497-PA [Anopheles gambiae str. PEST]
 gi|157019193|gb|EAA05912.5| AGAP009497-PA [Anopheles gambiae str. PEST]
          Length = 571

 Score =  229 bits (584), Expect = 3e-57,   Method: Compositional matrix adjust.
 Identities = 135/370 (36%), Positives = 208/370 (56%), Gaps = 16/370 (4%)

Query: 6   GAQHAKEEISKRSFFKPSKQFIKTYLKSFPNDPILQPDGLSNGVELTNGDTNESHELDLL 65
           G QH +E +  +    PSKQF+K+Y  SF NDPI          +L    T +   +   
Sbjct: 206 GQQHGREAMKSKKPTYPSKQFLKSYFSSFNNDPI---------GKLVVASTEQKGFI--- 253

Query: 66  SKAKRAFEHEDYLTAIRHCTEEIESTSSNHTKAL-ARLLRATVYIFTSQSTKAIEDLTQL 124
            KAK  F+  +Y   +  CTEE+E + S     L A LLR T Y   +   +A +DL  +
Sbjct: 254 -KAKALFDSAEYEGIVAACTEELEKSESESEYKLEALLLRGTFYNLIACYEEAKQDLDAV 312

Query: 125 VEDTSVDPKIKVNAHIKRAVVHLHAASDF-TKAFADLDEAEKVDPNVADSYYQRGQIYCL 183
           +E  + D +++ NA IKRA + +    D   + F     AE +D    D ++ RGQ+Y L
Sbjct: 313 IELETADKRLRSNALIKRASLAMQTEPDSPGECFKYFARAETIDSTNGDIFHHRGQVYIL 372

Query: 184 FGQYEEALRNLDKTIALNPNFHVARAQRHFVVHKMIVPG-DRERVEQSLKEFRNFVDTHS 242
             + ++A+ + ++   L P   +      +  ++      D   + +  K F   +D ++
Sbjct: 373 TDRMDDAIADFERAYQLCPTSGIIATHLCYASYRQAAQNRDESAIGRIRKRFNEILDQYA 432

Query: 243 NVVEACTLFAQVLVDQEDFDGAEEYFNRSIRVDPENASLYVHRAMLMLQARGNVDEAIKL 302
           + VE  ++ AQVL +++ FD A+  F R+++V+P+NA +YVHR +L LQ +G++DE +KL
Sbjct: 433 DCVECYSILAQVLTEEQKFDEADSCFARALKVEPDNAQIYVHRGLLQLQWKGDIDEGVKL 492

Query: 303 IEKAISIDKSCMFAYETLGTIEVQRGRLEEAVKCFNKALPLARDEAELSHIYSLRDAAIA 362
           I+KAI ID  C FAYETLGTIEVQRG L EA+K F +A+ LAR E  L H+YSL+DAA+A
Sbjct: 493 IKKAIQIDGKCEFAYETLGTIEVQRGNLVEAIKLFERAIELARTEMSLVHLYSLKDAAVA 552

Query: 363 QMKVCERYNI 372
           Q+ V +   +
Sbjct: 553 QVDVAKNMGL 562


>gi|47214138|emb|CAG01396.1| unnamed protein product [Tetraodon nigroviridis]
          Length = 617

 Score =  229 bits (583), Expect = 4e-57,   Method: Compositional matrix adjust.
 Identities = 137/402 (34%), Positives = 214/402 (53%), Gaps = 37/402 (9%)

Query: 6   GAQHAKEEISKRSFFKPSKQFIKTYLKSFPNDPILQPDGLSNGVELTNGDTNESHELDLL 65
           G + AK++   R    PS QFIK+Y  SF +D I +P       +       E+ E+   
Sbjct: 215 GKEKAKDKYKSREPMMPSPQFIKSYFSSFTDDVISKPLQKGEKKDEDKDKEGEAAEVTGS 274

Query: 66  S---KAKRAFEHEDYLTAIRHCTEEIESTSSNHTKALARLLRATVYIFTSQSTKAIEDLT 122
           S   KAK+  E E+Y   I  CT+EIES      +AL  LLRAT Y+    +T A  DL 
Sbjct: 275 SGYLKAKQYMEEENYDKIISECTKEIESGGRYTAEAL--LLRATFYLLIGNATAAQPDLD 332

Query: 123 QLVEDTSVDPKIKVNAHIKRAVVHLHAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYC 182
           +++     + K++ NA IKR  +++           D + A ++DP   D Y+ RGQ++ 
Sbjct: 333 RVINMPDANVKLRANALIKRGSMYMQQQQPMLST-QDFNMAAEIDPRNPDVYHHRGQVHT 391

Query: 183 ------------------------------LFGQYEEALRNLDKTIALNPNFHVARAQRH 212
                                         L  Q +EA+ + D+ I L P+  +A+AQ+ 
Sbjct: 392 HDRAIRIGRTERALVMALPSSLFLFSQLKILLDQVDEAVEDFDECIRLRPDSALAQAQKC 451

Query: 213 FVVHKMIVPGDR-ERVEQSLKEFRNFVDTHSNVVEACTLFAQVLVDQEDFDGAEEYFNRS 271
           F +++    G+   +V+ ++  F + +       E   L+AQ L DQ+ F  A+E +++ 
Sbjct: 452 FALYRQAYSGNNPSQVQTAIDGFEDVIRRFPKCAEGYALYAQALTDQQQFGKADEMYDKC 511

Query: 272 IRVDPENASLYVHRAMLMLQARGNVDEAIKLIEKAISIDKSCMFAYETLGTIEVQRGRLE 331
             ++P+NA+ YVH+ +L LQ + ++D  + LI KAI ID  C FAYET+GTIEVQRG L+
Sbjct: 512 SVLEPDNATTYVHKGLLQLQWKQDLDVGLDLINKAIEIDNKCDFAYETMGTIEVQRGNLD 571

Query: 332 EAVKCFNKALPLARDEAELSHIYSLRDAAIAQMKVCERYNIK 373
           +A++ FNKA+ LA+ E E++H+YSL DAA AQ +V  +Y +K
Sbjct: 572 KAIEMFNKAINLAKSEMEMAHLYSLCDAAYAQTEVARKYGLK 613


>gi|24583793|ref|NP_609536.1| translocase of outer membrane 70, isoform A [Drosophila
           melanogaster]
 gi|24583795|ref|NP_723711.1| translocase of outer membrane 70, isoform B [Drosophila
           melanogaster]
 gi|24583797|ref|NP_723712.1| translocase of outer membrane 70, isoform C [Drosophila
           melanogaster]
 gi|22946290|gb|AAF53148.2| translocase of outer membrane 70, isoform A [Drosophila
           melanogaster]
 gi|22946291|gb|AAN10797.1| translocase of outer membrane 70, isoform B [Drosophila
           melanogaster]
 gi|22946292|gb|AAN10798.1| translocase of outer membrane 70, isoform C [Drosophila
           melanogaster]
 gi|253314551|gb|ACT22579.1| FI03495p [Drosophila melanogaster]
          Length = 589

 Score =  228 bits (581), Expect = 6e-57,   Method: Compositional matrix adjust.
 Identities = 138/379 (36%), Positives = 216/379 (56%), Gaps = 17/379 (4%)

Query: 1   MFMDR-----GAQHAKEEISKRSFFKPSKQFIKTYLKSFPNDPILQPDGLSNGVELTNGD 55
           MF DR     G   A++ +  R    PS  F+ TY +SF  DP+      +  V     D
Sbjct: 202 MFADRVLKETGRLDAEKGMRNRVPVVPSACFVNTYTRSFIADPLQ-----TMKVPAPKSD 256

Query: 56  TNESHELDLLSKAKRAFEHEDYLTAIRHCTEEIESTSSN-HTKALARLLRATVYIFTSQS 114
                 L    +A  AF  E Y   I  CTEEIES+ +    K  A L+R T ++     
Sbjct: 257 APPKGFL----RAHLAFLEEKYEEIIPACTEEIESSEAEAQYKVEALLMRGTFHLLCGSY 312

Query: 115 TKAIEDLTQLVEDTSVDPKIKVNAHIKRAVVHLHAASDFTKAFADLDEAEKVDPNVADSY 174
            ++ +D   ++ +   DP ++  A+IKRA +++       K  AD  EAE+++P   D Y
Sbjct: 313 VESQQDFDAIIANDYADPNLRAYAYIKRAALYIQL-DQREKGIADFAEAERLNPENPDVY 371

Query: 175 YQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQRHFVVHKM-IVPGDRERVEQSLKE 233
           +QR QI  L  Q E AL   +K +++ PN  +A  Q+ +  +++ ++ GD+ R+E  +  
Sbjct: 372 HQRAQILLLLEQIEPALAEFEKAVSIAPNHAIAFVQKCYAEYRLSLLAGDQRRLESVMHT 431

Query: 234 FRNFVDTHSNVVEACTLFAQVLVDQEDFDGAEEYFNRSIRVDPENASLYVHRAMLMLQAR 293
           F+N ++   + VE  +L AQVL DQ+ F  AEEY+ +++ + P N +L VH+A+++LQ R
Sbjct: 432 FQNAIERFPSCVECYSLTAQVLADQQQFTQAEEYYKKAMVLAPTNPALIVHQAIMVLQWR 491

Query: 294 GNVDEAIKLIEKAISIDKSCMFAYETLGTIEVQRGRLEEAVKCFNKALPLARDEAELSHI 353
           G+++ A++L+ KAI +D  C  AYETLGT+EVQR +L  AV+ F KAL  A+ +AEL H+
Sbjct: 492 GDINLAVQLLNKAIEVDPKCELAYETLGTVEVQRAQLTRAVELFEKALLYAKSQAELVHV 551

Query: 354 YSLRDAAIAQMKVCERYNI 372
           YSLR+AA+AQ+ V ++  I
Sbjct: 552 YSLRNAAVAQINVTKKLGI 570



 Score = 49.3 bits (116), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 23/59 (38%), Positives = 34/59 (57%)

Query: 467 KAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQRHF 525
           K  AD  EAE+++P   D Y+QR QI  L  Q E AL   +K +++ PN  +A  Q+ +
Sbjct: 352 KGIADFAEAERLNPENPDVYHQRAQILLLLEQIEPALAEFEKAVSIAPNHAIAFVQKCY 410


>gi|195578649|ref|XP_002079176.1| GD22142 [Drosophila simulans]
 gi|194191185|gb|EDX04761.1| GD22142 [Drosophila simulans]
          Length = 589

 Score =  228 bits (580), Expect = 8e-57,   Method: Compositional matrix adjust.
 Identities = 139/379 (36%), Positives = 215/379 (56%), Gaps = 17/379 (4%)

Query: 1   MFMDR-----GAQHAKEEISKRSFFKPSKQFIKTYLKSFPNDPILQPDGLSNGVELTNGD 55
           MF DR     G   A++ I  R    PS  F+ TY +SF  DP+      +  V     D
Sbjct: 202 MFADRVLKETGRLDAEKGIRNRVPVVPSACFVNTYTRSFIADPLQ-----TMKVPAPKSD 256

Query: 56  TNESHELDLLSKAKRAFEHEDYLTAIRHCTEEIESTSSN-HTKALARLLRATVYIFTSQS 114
                 L    +A  AF  E Y   I  CTEEIES+ +    K  A L+R T ++     
Sbjct: 257 APPKGFL----RAHLAFLEEKYDEIIPACTEEIESSEAEAQYKVEALLMRGTFHLLCGSY 312

Query: 115 TKAIEDLTQLVEDTSVDPKIKVNAHIKRAVVHLHAASDFTKAFADLDEAEKVDPNVADSY 174
            ++ +D   ++ +   DP ++  A+IKRA + +       K  AD  EAE+++P   D Y
Sbjct: 313 VESQQDFDAIIANDYADPNLRAYAYIKRAALFIQL-DQREKGIADFAEAERLNPENPDVY 371

Query: 175 YQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQRHFVVHKM-IVPGDRERVEQSLKE 233
           +QR QI  L  Q E AL   +K +++ PN  +A  Q+ +  +++ ++ GD+ R+E  +  
Sbjct: 372 HQRAQILLLLEQIEPALAEFEKAVSIAPNHAIAFVQKCYAEYRLSLLAGDQRRLESVMHT 431

Query: 234 FRNFVDTHSNVVEACTLFAQVLVDQEDFDGAEEYFNRSIRVDPENASLYVHRAMLMLQAR 293
           F+N ++   + VE  +L AQVL DQ+ F  AEEY+ +++ + P N +L VH+A+++LQ R
Sbjct: 432 FQNAIERFPDCVECYSLTAQVLADQQQFAQAEEYYKKAMVLAPTNPALIVHQAIMVLQWR 491

Query: 294 GNVDEAIKLIEKAISIDKSCMFAYETLGTIEVQRGRLEEAVKCFNKALPLARDEAELSHI 353
           G+++ A++L+ KAI +D  C  AYETLGT+EVQR +L  AV+ F KAL  A+ +AEL H+
Sbjct: 492 GDINLAVQLLNKAIEVDPKCELAYETLGTVEVQRAQLTRAVELFEKALLYAKSQAELVHV 551

Query: 354 YSLRDAAIAQMKVCERYNI 372
           YSLR+AA+AQ+ V ++  I
Sbjct: 552 YSLRNAAVAQINVTKKLGI 570



 Score = 49.3 bits (116), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 23/59 (38%), Positives = 34/59 (57%)

Query: 467 KAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQRHF 525
           K  AD  EAE+++P   D Y+QR QI  L  Q E AL   +K +++ PN  +A  Q+ +
Sbjct: 352 KGIADFAEAERLNPENPDVYHQRAQILLLLEQIEPALAEFEKAVSIAPNHAIAFVQKCY 410


>gi|307193737|gb|EFN76419.1| Mitochondrial import receptor subunit TOM70 [Harpegnathos saltator]
          Length = 579

 Score =  227 bits (578), Expect = 1e-56,   Method: Compositional matrix adjust.
 Identities = 135/380 (35%), Positives = 210/380 (55%), Gaps = 19/380 (5%)

Query: 6   GAQHAKEEISKRSFFKPSKQFIKTYLKSFPNDPILQPDGLSNGVELTNGDTNESHELDLL 65
           G QH  E +  + F  PSK FIKTY+ SFPNDP+     L + +E    D  E ++ +LL
Sbjct: 209 GKQHVHENLQNKKFIMPSKHFIKTYMVSFPNDPVFS--RLQHPLE----DIPELYK-NLL 261

Query: 66  SKAKRAFEHEDYLTAIRHCTEEIESTSSN--HTKALARLLRATVYIFTSQSTKAIEDLTQ 123
               +  + E Y   I  CT+ I S   +    K    LLR T Y+   Q T A EDL  
Sbjct: 262 ----QTLKDEKYDDVIPLCTDIIASAEFDTLSCKMEILLLRTTFYLLLGQHTSAFEDLDV 317

Query: 124 LVEDTSVDPKIKVNAHIKRAVVHLHAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCL 183
           ++ D +V   + +NA IK+A +++   +    A    + A  +D    D Y+  GQ++ L
Sbjct: 318 IINDKNVPKNVILNALIKKATLYMQLENP-DMAVKGFEAAINLDETYGDIYHHSGQMHLL 376

Query: 184 FGQYEEALRNLDKTIALNPNFHVARAQRHFVVHKM-IVPGDRERVEQSLKEFRNFVDTHS 242
               +EA R+ +K    NP+F     Q+ +  ++  I   D   ++++ K+F   ++ + 
Sbjct: 377 LNNVDEAKRDFEKAARYNPSFGPGHVQKCYTDYRYAIFYRDINALQKAEKDFMEALEKYP 436

Query: 243 NVVEACTLFAQVLVDQEDFDGAEEYFNRSIRVDPENASLYVHRAMLMLQARGN----VDE 298
           +  E   L  Q++ + +D++ A+ YF +++ +DPENA++YVHR +L LQ  GN    +D+
Sbjct: 437 DRPEGYMLCGQMMAESQDYEKADTYFAKALEIDPENANVYVHRGLLQLQWHGNTSSGIDK 496

Query: 299 AIKLIEKAISIDKSCMFAYETLGTIEVQRGRLEEAVKCFNKALPLARDEAELSHIYSLRD 358
           A++ I KA+ ID+ C   YETLGTIEVQRG LEEA+K F+KAL L R   EL+H+YSLRD
Sbjct: 497 AVEYIHKALEIDEKCELGYETLGTIEVQRGNLEEAIKLFDKALELCRTSMELTHLYSLRD 556

Query: 359 AAIAQMKVCERYNIKKKVSP 378
           A   Q+ +  +  +  K +P
Sbjct: 557 ATKTQLTLKNKLGLDIKDAP 576


>gi|195350967|ref|XP_002042008.1| GM26429 [Drosophila sechellia]
 gi|194123832|gb|EDW45875.1| GM26429 [Drosophila sechellia]
          Length = 589

 Score =  227 bits (578), Expect = 1e-56,   Method: Compositional matrix adjust.
 Identities = 139/379 (36%), Positives = 215/379 (56%), Gaps = 17/379 (4%)

Query: 1   MFMDR-----GAQHAKEEISKRSFFKPSKQFIKTYLKSFPNDPILQPDGLSNGVELTNGD 55
           MF DR     G   A++ I  R    PS  F+ TY +SF  DP+      +  V     D
Sbjct: 202 MFADRVLKETGRLDAEKGIRNRVPVVPSACFVNTYTRSFIADPLQ-----TMKVPAPKSD 256

Query: 56  TNESHELDLLSKAKRAFEHEDYLTAIRHCTEEIESTSSN-HTKALARLLRATVYIFTSQS 114
                 L    +A  AF  E Y   I  CTEEIES+ +    K  A L+R T ++     
Sbjct: 257 APPKGFL----RAHLAFLEEKYDEIIPACTEEIESSEAEAQYKVEALLMRGTFHLLCGSY 312

Query: 115 TKAIEDLTQLVEDTSVDPKIKVNAHIKRAVVHLHAASDFTKAFADLDEAEKVDPNVADSY 174
            ++ +D   ++ +   DP ++  A+IKRA + +       K  AD  EAE+++P   D Y
Sbjct: 313 VESQQDFDAILANDYADPNLRAYAYIKRAALFIQL-DQREKGIADFAEAERLNPENPDVY 371

Query: 175 YQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQRHFVVHKM-IVPGDRERVEQSLKE 233
           +QR QI  L  Q E AL   +K +++ PN  +A  Q+ +  +++ ++ GD+ R+E  +  
Sbjct: 372 HQRAQILLLLEQIEPALAEFEKAVSIAPNHAIAFVQKCYAEYRLSLLAGDQRRLESVMHT 431

Query: 234 FRNFVDTHSNVVEACTLFAQVLVDQEDFDGAEEYFNRSIRVDPENASLYVHRAMLMLQAR 293
           F+N ++   + VE  +L AQVL DQ+ F  AEEY+ +++ + P N +L VH+A+++LQ R
Sbjct: 432 FQNAIERFPDCVECYSLTAQVLADQQQFAQAEEYYKKAMVLAPTNPALIVHQAIMVLQWR 491

Query: 294 GNVDEAIKLIEKAISIDKSCMFAYETLGTIEVQRGRLEEAVKCFNKALPLARDEAELSHI 353
           G+++ A++L+ KAI +D  C  AYETLGT+EVQR +L  AV+ F KAL  A+ +AEL H+
Sbjct: 492 GDINLAVQLLNKAIEVDPKCELAYETLGTVEVQRAQLTRAVELFEKALLYAKSQAELVHV 551

Query: 354 YSLRDAAIAQMKVCERYNI 372
           YSLR+AA+AQ+ V ++  I
Sbjct: 552 YSLRNAAVAQINVTKKLGI 570



 Score = 49.3 bits (116), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 23/59 (38%), Positives = 34/59 (57%)

Query: 467 KAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQRHF 525
           K  AD  EAE+++P   D Y+QR QI  L  Q E AL   +K +++ PN  +A  Q+ +
Sbjct: 352 KGIADFAEAERLNPENPDVYHQRAQILLLLEQIEPALAEFEKAVSIAPNHAIAFVQKCY 410


>gi|241613489|ref|XP_002407411.1| heat shock protein 70 (HSP70)-interacting protein, putative [Ixodes
           scapularis]
 gi|215502791|gb|EEC12285.1| heat shock protein 70 (HSP70)-interacting protein, putative [Ixodes
           scapularis]
          Length = 589

 Score =  226 bits (576), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 136/388 (35%), Positives = 212/388 (54%), Gaps = 25/388 (6%)

Query: 1   MFMDR-----GAQHAKEEISKRSFFKPSKQFIKTYLKSFPNDPILQP-DGLSNGVELTNG 54
           M  DR     G   AKE +  R    PSK FI+ Y  SF  DPI++       G      
Sbjct: 204 MVTDRVLKKLGKASAKEIVKTRKPTMPSKHFIRNYFVSFCEDPIIEATQAFRQGKAPQPE 263

Query: 55  DTNE---------SHELDLLSKAKRAFEHEDYLTAIRHCTEEIESTSSNHTKALARLLRA 105
           D+ E         SH L      K     E+Y   + HC  E++       +AL  LLR 
Sbjct: 264 DSEEQKRWVYGRDSHCL------KVCLAREEYEKVVAHCNAEVDGGGKCAAEAL--LLRG 315

Query: 106 TVYIFTSQSTKAIEDLTQLVEDTSVDPKIKVNAHIKRAVVHLHAASDFTKAFADLDEAEK 165
           T ++   +S   ++DL QL+   ++  K++VNA IK   + +H+     +A  D + A +
Sbjct: 316 TFHLLQGRSQATLDDLNQLLSMDNISSKVRVNALIKLGTLKVHS-EHLDEALQDFERAAE 374

Query: 166 VDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQRHFVVHKM-IVPGDR 224
           +DP  AD +  RGQ+  L  + E+ L+++++T  L P+F  A AQR +V ++  +   D 
Sbjct: 375 LDPANADIFLHRGQVLMLLDRLEDTLQDMERTCTLRPDFPSAAAQRCYVQYRCGMRATDP 434

Query: 225 ERVEQSLKEFRNFVDTHSNVVEACTLFAQVLVDQEDFDGAEEYFNRSIRVDPENASLYVH 284
           E+ +++L  F        N  E+  L AQ+L + ++FD AEEYF ++ + DP + ++YVH
Sbjct: 435 EQRQKALDGFAEVQQRFPNCPESYFLHAQLLTETQEFDKAEEYFRKAEKADPTDPNVYVH 494

Query: 285 RAMLMLQARGNVDEAIKLIEKAISIDKSCMFAYETLGTIEVQRGRLEEAVKCFNKALPLA 344
             +L LQ + + D+A++ ++KAI +D+ C FAYET G+I+VQRG L+E ++ F KA+ LA
Sbjct: 495 LGILQLQWKQDFDKAVQYLQKAIDMDEKCQFAYETFGSIQVQRGFLKEGLELFEKAIALA 554

Query: 345 RDEAELSHIYSLRDAAIAQMKVCERYNI 372
           + E EL+H+ SLRDAA AQ  V +R  I
Sbjct: 555 QTETELAHLLSLRDAAEAQGLVAQRLGI 582



 Score = 49.3 bits (116), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 22/60 (36%), Positives = 37/60 (61%)

Query: 467 KAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQRHFV 526
           +A  D + A ++DP  AD +  RGQ+  L  + E+ L+++++T  L P+F  A AQR +V
Sbjct: 364 EALQDFERAAELDPANADIFLHRGQVLMLLDRLEDTLQDMERTCTLRPDFPSAAAQRCYV 423


>gi|405973194|gb|EKC37920.1| Mitochondrial import receptor subunit TOM70 [Crassostrea gigas]
          Length = 587

 Score =  224 bits (571), Expect = 9e-56,   Method: Compositional matrix adjust.
 Identities = 135/373 (36%), Positives = 207/373 (55%), Gaps = 14/373 (3%)

Query: 6   GAQHAKEEISKRSFFKPSKQFIKTYLKSFPNDPILQPDGLSNGVELTNGDTNESHELDLL 65
           G   AKEE  KR    PSK FI+TYL SF NDP++     +    L +     S E    
Sbjct: 213 GQAKAKEEFKKRKPTMPSKHFIRTYLNSFLNDPVI-----NESKALMSQQNGHSDETGAY 267

Query: 66  SKAKRAFEHEDYLTAIRHCTEEIESTSSNHTKALARLLRATVYIFTSQSTKAIEDLTQLV 125
            +A +    E++   I  CT+EI   +   T+A  RLLR T Y   +Q  +A+ED  Q++
Sbjct: 268 QQALQKLGAEEFEGIIDLCTKEISENTQKATEA--RLLRGTFYFLCNQQKEALEDFNQVL 325

Query: 126 EDTSVDPKIKVNAHIKRAVVHLHAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFG 185
               +D ++KVNA IKR  + +    + T    D   A ++DP+  D Y+ RG       
Sbjct: 326 AAELLDKRMKVNALIKRGSLSIQQEKN-TAGLDDFATAIRIDPDNVDVYHHRGHHNIQMD 384

Query: 186 QYEEALRNLDKTIALNPNFHVARAQRHFVVHKMIVP---GDRERVEQS-LKEFRNFVDTH 241
           + E+A+R+L+  I+    F  +  Q+ F  HK       G    + QS L+ ++N VD  
Sbjct: 385 RIEDAIRDLENAISKCTTFAPSHVQKSFADHKKAASQLMGMNLPLPQSVLQSYKNCVDMF 444

Query: 242 SNVVEACTLFAQVLVDQEDFDGAEEYFNRSIRVDPENASLYVHRAMLMLQARGNVDEAIK 301
            +  +A  L+AQ L D   F+ A+  F+++I ++P+NA+  VHR +L LQ + N+ EA  
Sbjct: 445 PDYGDARALYAQALGDAGKFEEADREFSKAIELEPDNATALVHRGLLQLQWKQNMKEATA 504

Query: 302 LIEKAISIDKSCMFAYETLGTIEVQR--GRLEEAVKCFNKALPLARDEAELSHIYSLRDA 359
           +I KAI +D  C +AYE LGT+EVQ+  G +E+AV+ F KA+ L+R E+E++H++SL DA
Sbjct: 505 IINKAIELDPKCEYAYEVLGTLEVQKGPGSMEKAVELFQKAISLSRTESEMAHLFSLSDA 564

Query: 360 AIAQMKVCERYNI 372
           A AQ+ V ++  I
Sbjct: 565 AKAQLNVAKKLRI 577


>gi|195115032|ref|XP_002002071.1| GI17182 [Drosophila mojavensis]
 gi|193912646|gb|EDW11513.1| GI17182 [Drosophila mojavensis]
          Length = 598

 Score =  223 bits (568), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 138/379 (36%), Positives = 214/379 (56%), Gaps = 16/379 (4%)

Query: 1   MFMDR-----GAQHAKEEISKRSFFKPSKQFIKTYLKSFPNDPILQPDGLSNGVELTNGD 55
           MF DR     G   A++ +  R    PS  FI TY++SF  DP LQ   L    E     
Sbjct: 210 MFADRVLKETGRIDAEKGLRDRVPVVPSSSFIDTYMRSFIADP-LQTMVLPEPTE----- 263

Query: 56  TNESHELDLLSKAKRAFEHEDYLTAIRHCTEEIESTSSN-HTKALARLLRATVYIFTSQS 114
            N++     + +A+RAF+ + Y   I  CTEEIES+ +    K  A L+R T ++     
Sbjct: 264 -NDAPPRGFI-RARRAFDEQKYDEIIAACTEEIESSEAESQYKVEALLMRGTFHLLCGSF 321

Query: 115 TKAIEDLTQLVEDTSVDPKIKVNAHIKRAVVHLHAASDFTKAFADLDEAEKVDPNVADSY 174
             +  D   ++ +   D  ++  A+I+RA + +    +  K  AD  EAEK+ P+  D Y
Sbjct: 322 ADSKLDFDAILANADADITLRTYAYIRRAALFIQM-EEREKGLADFAEAEKLKPDNPDVY 380

Query: 175 YQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQRHFVVHKM-IVPGDRERVEQSLKE 233
           +QR QI  L  Q + AL   DK + L PN  +A  Q+ +  +++ ++ GD+  +E+ +K+
Sbjct: 381 HQRAQILLLLEQIDAALVEFDKAVRLAPNHAIANVQKCYAEYRLALMSGDQNSLERVIKD 440

Query: 234 FRNFVDTHSNVVEACTLFAQVLVDQEDFDGAEEYFNRSIRVDPENASLYVHRAMLMLQAR 293
           F   +    + VE  +L AQVL DQ+ F  A+ +++ +++  P N +L VH+A++MLQ R
Sbjct: 441 FELAIKKFPDCVECYSLMAQVLADQQQFPQAQNFYDMAMKRAPTNPALLVHQAIMMLQWR 500

Query: 294 GNVDEAIKLIEKAISIDKSCMFAYETLGTIEVQRGRLEEAVKCFNKALPLARDEAELSHI 353
           G++D A+ L+ +AI +D  C  AYETLGT+EVQR +L  AV+ F KAL  A+  AEL H+
Sbjct: 501 GDIDAAVSLLNRAIEVDPKCELAYETLGTVEVQRAQLRRAVELFEKALLYAKSHAELVHV 560

Query: 354 YSLRDAAIAQMKVCERYNI 372
           YSLR+AA+AQ+ V  +  I
Sbjct: 561 YSLRNAALAQINVTRKLGI 579



 Score = 51.2 bits (121), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 25/59 (42%), Positives = 33/59 (55%)

Query: 467 KAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQRHF 525
           K  AD  EAEK+ P+  D Y+QR QI  L  Q + AL   DK + L PN  +A  Q+ +
Sbjct: 361 KGLADFAEAEKLKPDNPDVYHQRAQILLLLEQIDAALVEFDKAVRLAPNHAIANVQKCY 419


>gi|312381683|gb|EFR27373.1| hypothetical protein AND_05952 [Anopheles darlingi]
          Length = 570

 Score =  221 bits (562), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 136/364 (37%), Positives = 206/364 (56%), Gaps = 16/364 (4%)

Query: 6   GAQHAKEEISKRSFFKPSKQFIKTYLKSFPNDPILQPDGLSNGVELTNGDTNESHELDLL 65
           G QHA+E +  +    PSK F+K Y  SF NDP+ +                 S E    
Sbjct: 203 GRQHAQEAMKDKKEVIPSKLFMKNYFTSFANDPVRKM-------------VIASSEPKGF 249

Query: 66  SKAKRAFEHEDYLTAIRHCTEEIESTSSNHTKAL-ARLLRATVYIFTSQSTKAIEDLTQL 124
            KAK  F+  +Y   +  CTEEIES+ +     L A LLR T Y   +   +A +DL  +
Sbjct: 250 VKAKMLFDKGEYDGIVAACTEEIESSEAEAEYKLEALLLRGTFYNLMANYAEAKQDLDAV 309

Query: 125 VEDTSVDPKIKVNAHIKRAVVHLHAASDFTK-AFADLDEAEKVDPNVADSYYQRGQIYCL 183
            E  + D +++ NA IKRA + +   S+  +  F    +AE +D    D Y  RGQ++ L
Sbjct: 310 AELETADKRLRSNALIKRASLTVQTDSETPEECFKFFAKAEDIDSTNCDIYQHRGQVFIL 369

Query: 184 FGQYEEALRNLDKTIALNPNFHVARAQRHFVVHKM-IVPGDRERVEQSLKEFRNFVDTHS 242
             +  EA+ + ++   L P+  +      +  ++M ++  D      ++K F   ++ + 
Sbjct: 370 MDRMNEAVMDFERAHNLCPDSAIIATHLCYSRYRMALMTKDDTAHRNAMKRFHEIIEQYP 429

Query: 243 NVVEACTLFAQVLVDQEDFDGAEEYFNRSIRVDPENASLYVHRAMLMLQARGNVDEAIKL 302
           N +E  ++ AQVL +Q++F  A+ YF ++++++P NA + VHRA+L LQ +GNV+EA KL
Sbjct: 430 NCLECYSIMAQVLTEQQEFQEADSYFQKALKLEPGNAQILVHRALLQLQWQGNVEEATKL 489

Query: 303 IEKAISIDKSCMFAYETLGTIEVQRGRLEEAVKCFNKALPLARDEAELSHIYSLRDAAIA 362
           I++AI ID  C FAYETLGTIEVQRG L EA+K F+ A+ LA+ E  L H+YSL+DAAIA
Sbjct: 490 IKQAIEIDDKCEFAYETLGTIEVQRGNLVEAIKLFDGAIALAKAERSLVHLYSLKDAAIA 549

Query: 363 QMKV 366
           Q+ V
Sbjct: 550 QINV 553


>gi|390332486|ref|XP_001199474.2| PREDICTED: mitochondrial import receptor subunit TOM70
           [Strongylocentrotus purpuratus]
          Length = 502

 Score =  219 bits (558), Expect = 3e-54,   Method: Compositional matrix adjust.
 Identities = 133/373 (35%), Positives = 210/373 (56%), Gaps = 11/373 (2%)

Query: 1   MFMDRGAQHAKEEISKRSFFKPSKQFIKTYLKSFPNDPILQPDGLSNGVELTNGDTNESH 60
           M  + G + A E+ ++R    PS QFI++Y  SF ND      G+S   +      N+  
Sbjct: 132 MLKEIGKEKAAEKYTERVPSLPSGQFIQSYFSSFSND------GISATADEDYCSPNDFS 185

Query: 61  ELDLLSKAKRAFEHEDYLTAIRHCTEEIESTSSNHTKALARLLRATVYIFTSQSTKAIED 120
                +KAK  F+   Y + I  CT+EI+S  S   +AL  L+RAT  +     + A  D
Sbjct: 186 STGY-AKAKYCFKEGRYDSIIDACTDEIDSEGSKLPEAL--LMRATFRLLKGLGSLARPD 242

Query: 121 LTQLVEDTSVDPKIKVNAHIKRAVVHLHAASDFTKAFADLDEAEKVDPNVADSYYQRGQI 180
           L  +++    D K+K NA IKR  +H+       +A AD + A  +DPN AD ++ RGQ+
Sbjct: 243 LDSVIKLPEADKKLKANALIKRGSMHMQEGLQ-KEAMADFELAVTIDPNNADVFHHRGQL 301

Query: 181 YCLFGQYEEALRNLDKTIALNPNFHVARAQRHFVVHKMIVPGDRE-RVEQSLKEFRNFVD 239
             L  + ++A+ +  K   L+P+F +A AQ  +  ++M V      +++ ++K   +   
Sbjct: 302 LLLLERVDKAVEDFQKCSQLSPDFALAHAQHCYANYRMAVMMQSPMQMQAAVKGLEDCCK 361

Query: 240 THSNVVEACTLFAQVLVDQEDFDGAEEYFNRSIRVDPENASLYVHRAMLMLQARGNVDEA 299
             S+  EA  L+AQ L DQ  F  A+E F +++ ++P+N + YVHR +L L  + + D+A
Sbjct: 362 KFSSCAEAFALYAQSLNDQGQFHQADENFLKAVALEPDNPTAYVHRGLLYLAWKKDPDQA 421

Query: 300 IKLIEKAISIDKSCMFAYETLGTIEVQRGRLEEAVKCFNKALPLARDEAELSHIYSLRDA 359
           I++I+KA+ ID  C FAYETLGTIEVQRG +  A + FN+A+ L R E E++H++SL  A
Sbjct: 422 IRMIQKALEIDSRCDFAYETLGTIEVQRGNMAAAQEYFNQAIELTRTEMEMAHLFSLSVA 481

Query: 360 AIAQMKVCERYNI 372
           A+AQ  V  ++ I
Sbjct: 482 ALAQSNVTTKFGI 494



 Score = 45.8 bits (107), Expect = 0.051,   Method: Compositional matrix adjust.
 Identities = 24/71 (33%), Positives = 38/71 (53%), Gaps = 1/71 (1%)

Query: 457 GQKHAASDFTK-AFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPN 515
           G  H      K A AD + A  +DPN AD ++ RGQ+  L  + ++A+ +  K   L+P+
Sbjct: 265 GSMHMQEGLQKEAMADFELAVTIDPNNADVFHHRGQLLLLLERVDKAVEDFQKCSQLSPD 324

Query: 516 FHVARAQRHFV 526
           F +A AQ  + 
Sbjct: 325 FALAHAQHCYA 335


>gi|427789173|gb|JAA60038.1| Putative translocase of outer mitochondrial membrane complex
           subunit [Rhipicephalus pulchellus]
          Length = 571

 Score =  218 bits (556), Expect = 5e-54,   Method: Compositional matrix adjust.
 Identities = 129/369 (34%), Positives = 207/369 (56%), Gaps = 9/369 (2%)

Query: 6   GAQHAKEEISKRSFFKPSKQFIKTYLKSFPNDPILQP-DGLSNGVELTNGDTNESHELDL 64
           G   AKE I+ R    PSK FI+ Y  SF  DP+++       G      D+        
Sbjct: 203 GKASAKELITNREPVLPSKHFIRNYFVSFCEDPVIKAVQAHREGKPFPKSDSPGG----A 258

Query: 65  LSKAKRAFEHEDYLTAIRHCTEEIESTSSNHTKALARLLRATVYIFTSQSTKAIEDLTQL 124
            ++A      E Y   I HCT+EI++      +AL  LLR T+ +    S   I+DL ++
Sbjct: 259 YAQAVECLADEKYEDVIEHCTKEIQNEGEALAEAL--LLRGTLRMLQGLSQSTIDDLNRV 316

Query: 125 VEDTSVDPKIKVNAHIKRAVVHLHAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLF 184
           ++  S   K++VNA IK   + +HA     +A  D ++A   DP+ AD +  RGQ+  L 
Sbjct: 317 LQMDSASLKVRVNALIKLGTLKVHA-EKLEEALEDFEQAATQDPSNADVFLHRGQVLLLL 375

Query: 185 GQYEEALRNLDKTIALNPNFHVARAQRHFVVHKM-IVPGDRERVEQSLKEFRNFVDTHSN 243
            + E+ LR+++++++L P+F  A AQR +V ++      D  +  ++L++F        N
Sbjct: 376 DRLEDTLRDMERSVSLRPDFPSAAAQRCYVQYRYGAATKDASKQMEALQDFEEVQQRFPN 435

Query: 244 VVEACTLFAQVLVDQEDFDGAEEYFNRSIRVDPENASLYVHRAMLMLQARGNVDEAIKLI 303
             E   L AQ+L + ++F+ AEE F ++ + DP + ++ VH  +L LQ   + D+A++ +
Sbjct: 436 CPECYFLHAQILSENKEFERAEENFLKAQKADPTDPNVPVHLGILHLQWTQDFDKAVEFM 495

Query: 304 EKAISIDKSCMFAYETLGTIEVQRGRLEEAVKCFNKALPLARDEAELSHIYSLRDAAIAQ 363
            KAI +D  C FA+ETLG+++VQRG+L+E +  F KA+ LA+ EAEL+H+ SLRDAA AQ
Sbjct: 496 NKAIEMDDKCQFAHETLGSVQVQRGQLDEGLAHFEKAISLAQTEAELAHLLSLRDAAEAQ 555

Query: 364 MKVCERYNI 372
            KV +R  +
Sbjct: 556 GKVAKRLGM 564



 Score = 52.4 bits (124), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 23/65 (35%), Positives = 40/65 (61%)

Query: 462 ASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARA 521
           A    +A  D ++A   DP+ AD +  RGQ+  L  + E+ LR+++++++L P+F  A A
Sbjct: 341 AEKLEEALEDFEQAATQDPSNADVFLHRGQVLLLLDRLEDTLRDMERSVSLRPDFPSAAA 400

Query: 522 QRHFV 526
           QR +V
Sbjct: 401 QRCYV 405


>gi|194760541|ref|XP_001962498.1| GF15495 [Drosophila ananassae]
 gi|190616195|gb|EDV31719.1| GF15495 [Drosophila ananassae]
          Length = 596

 Score =  216 bits (549), Expect = 3e-53,   Method: Compositional matrix adjust.
 Identities = 134/379 (35%), Positives = 223/379 (58%), Gaps = 16/379 (4%)

Query: 1   MFMDR-----GAQHAKEEISKRSFFKPSKQFIKTYLKSFPNDPILQPDGLSNGVELTNGD 55
           MF DR     G   A++ +  R    PS  F+ TY++SF  DP+         ++L +  
Sbjct: 209 MFADRVLKETGRVAAEKGMRTRVPVVPSACFVNTYMRSFIADPL-------QSIQLPSKS 261

Query: 56  TNESHELDLLSKAKRAFEHEDYLTAIRHCTEEIESTSSN-HTKALARLLRATVYIFTSQS 114
            +++  L    +A++ F +E +   I  CTEEIES+ +    K  A L+R T ++     
Sbjct: 262 ESDA-PLKGFLRARQCFINEQFDDIIPACTEEIESSEAEAQYKVEALLMRGTFHLLCGSY 320

Query: 115 TKAIEDLTQLVEDTSVDPKIKVNAHIKRAVVHLHAASDFTKAFADLDEAEKVDPNVADSY 174
           T++ +D   ++ +   DP ++  A++KRA + +    +  K  AD +EAE++ P+ AD Y
Sbjct: 321 TESKQDFDAILSNADADPTLRAYAYMKRAALFIQL-DEREKGLADFEEAERLKPDNADVY 379

Query: 175 YQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQRHFVVHKM-IVPGDRERVEQSLKE 233
           +QR QI  L  Q E AL    K + L PN  +A  Q+ +  +++ ++ GD+ R+E  +  
Sbjct: 380 HQRAQILLLLEQIEPALVEFSKAVRLAPNHAIALVQQCYAEYRLSLLVGDQRRLEAVMHA 439

Query: 234 FRNFVDTHSNVVEACTLFAQVLVDQEDFDGAEEYFNRSIRVDPENASLYVHRAMLMLQAR 293
           F   ++   + VE  +L AQVL DQ+ F  A++Y+ +++++ P N +L VH+A++MLQ R
Sbjct: 440 FEQAIERFPDCVECYSLMAQVLADQQQFPQAQQYYQKAMKLAPNNPALIVHQAIMMLQWR 499

Query: 294 GNVDEAIKLIEKAISIDKSCMFAYETLGTIEVQRGRLEEAVKCFNKALPLARDEAELSHI 353
           G+++ A+KL+ +AI +D  C  AYETLGT+EVQR  L++AV+ F KAL  A+ +AEL H+
Sbjct: 500 GDIEVAVKLLNQAIEVDPKCELAYETLGTVEVQRANLKKAVELFEKALLYAKSQAELVHV 559

Query: 354 YSLRDAAIAQMKVCERYNI 372
           YSL +AA+AQ+ V ++  I
Sbjct: 560 YSLHNAAVAQINVTKKLGI 578



 Score = 51.6 bits (122), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 25/59 (42%), Positives = 34/59 (57%)

Query: 467 KAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQRHF 525
           K  AD +EAE++ P+ AD Y+QR QI  L  Q E AL    K + L PN  +A  Q+ +
Sbjct: 360 KGLADFEEAERLKPDNADVYHQRAQILLLLEQIEPALVEFSKAVRLAPNHAIALVQQCY 418


>gi|195052845|ref|XP_001993381.1| GH13778 [Drosophila grimshawi]
 gi|193900440|gb|EDV99306.1| GH13778 [Drosophila grimshawi]
          Length = 599

 Score =  214 bits (545), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 136/379 (35%), Positives = 218/379 (57%), Gaps = 16/379 (4%)

Query: 1   MFMDR-----GAQHAKEEISKRSFFKPSKQFIKTYLKSFPNDPILQPDGLSNGVELTNGD 55
           MF DR     G   A++ +  R    PS  FI TY++SF  DP+         +E+    
Sbjct: 214 MFADRVLKETGRIDAEKGLRDRVPVVPSASFINTYMRSFIADPL-------QTMEVPPSL 266

Query: 56  TNESHELDLLSKAKRAFEHEDYLTAIRHCTEEIESTSSN-HTKALARLLRATVYIFTSQS 114
             ++     L +AKRAFE + Y   I  CTEEIES+ +    K  A L+R T ++     
Sbjct: 267 VADTPPRGFL-RAKRAFEEQKYDEIIAACTEEIESSEAESQFKVEALLMRGTFHLLCGSF 325

Query: 115 TKAIEDLTQLVEDTSVDPKIKVNAHIKRAVVHLHAASDFTKAFADLDEAEKVDPNVADSY 174
            ++  D   ++ +   D  ++  A+IKRA + +    +     AD  EAEK+ PN  D Y
Sbjct: 326 AESKPDFDAILANEDADVTLRSYAYIKRAALFIQT-QEPDWGLADFVEAEKLTPNNPDVY 384

Query: 175 YQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQRHFVVHKM-IVPGDRERVEQSLKE 233
           +QR QI  L  Q + AL   +K + L PN  +A  Q+ +  +++ ++ GD++R+E+ +K+
Sbjct: 385 HQRAQILLLLEQIDMALLEFEKAVRLAPNHAIATVQKCYAEYRLALMTGDQKRLERVIKD 444

Query: 234 FRNFVDTHSNVVEACTLFAQVLVDQEDFDGAEEYFNRSIRVDPENASLYVHRAMLMLQAR 293
           F + ++   + VE  +L AQVL DQ+ F  A+ ++  +++  P N +L VH++++MLQ R
Sbjct: 445 FEDAIEKFPDCVECYSLMAQVLADQQQFAQAQHFYEMAVKRAPTNPALLVHQSIMMLQWR 504

Query: 294 GNVDEAIKLIEKAISIDKSCMFAYETLGTIEVQRGRLEEAVKCFNKALPLARDEAELSHI 353
           G+++ A+ L+ +AI++D  C  AYETLGT+EVQR +L+ AV  F KAL  A+ +AEL H+
Sbjct: 505 GDIEAAVALLNRAIAVDPKCELAYETLGTVEVQRAQLQRAVDLFEKALLYAKSKAELVHV 564

Query: 354 YSLRDAAIAQMKVCERYNI 372
           YSLR+AA+AQ+ V  +  I
Sbjct: 565 YSLRNAALAQINVTRKLGI 583



 Score = 48.9 bits (115), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 24/58 (41%), Positives = 32/58 (55%)

Query: 468 AFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQRHF 525
             AD  EAEK+ PN  D Y+QR QI  L  Q + AL   +K + L PN  +A  Q+ +
Sbjct: 366 GLADFVEAEKLTPNNPDVYHQRAQILLLLEQIDMALLEFEKAVRLAPNHAIATVQKCY 423


>gi|195387345|ref|XP_002052356.1| GJ22149 [Drosophila virilis]
 gi|194148813|gb|EDW64511.1| GJ22149 [Drosophila virilis]
          Length = 597

 Score =  214 bits (544), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 137/379 (36%), Positives = 215/379 (56%), Gaps = 16/379 (4%)

Query: 1   MFMDR-----GAQHAKEEISKRSFFKPSKQFIKTYLKSFPNDPILQPDGLSNGVELTNGD 55
           MF DR     G   A++ +  R    PS  FI TY++SF  DP+   +   + V     D
Sbjct: 209 MFADRVLKETGRLDAEKGLRDRVPVVPSASFINTYMRSFIADPLQTMNVPPSAV----AD 264

Query: 56  TNESHELDLLSKAKRAFEHEDYLTAIRHCTEEIESTSSN-HTKALARLLRATVYIFTSQS 114
           T     L    +A++AFE + Y   I  CTEEIES+ +    K  A L+R T ++     
Sbjct: 265 TPPRGFL----RARQAFEEQKYDEIIAACTEEIESSEAESQYKVEALLMRGTFHLLCGSF 320

Query: 115 TKAIEDLTQLVEDTSVDPKIKVNAHIKRAVVHLHAASDFTKAFADLDEAEKVDPNVADSY 174
             +  D   ++ +   D  ++  A IKRA + +    +  K  AD  EAEK+ P+  D Y
Sbjct: 321 ADSKLDFDAILANDDADTTLRAYAFIKRAALFIQT-EEREKGLADFAEAEKLKPDNPDVY 379

Query: 175 YQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQRHFVVHKM-IVPGDRERVEQSLKE 233
           +QR QI  L  Q E AL   DK + L P   +A  Q+ +  +++ ++ GD++R+E+ +++
Sbjct: 380 HQRAQILLLLEQIEAALLEFDKAVRLAPQHAIANVQKCYAEYRLSLMSGDQKRLERVIQD 439

Query: 234 FRNFVDTHSNVVEACTLFAQVLVDQEDFDGAEEYFNRSIRVDPENASLYVHRAMLMLQAR 293
           F   ++   + VE  +L AQVL DQ+ F  A++++  +++  P N +L VH+A++MLQ R
Sbjct: 440 FEKAIEKFPDCVECYSLMAQVLADQQQFPQAQQFYEMAMKRAPTNPALLVHQAIMMLQWR 499

Query: 294 GNVDEAIKLIEKAISIDKSCMFAYETLGTIEVQRGRLEEAVKCFNKALPLARDEAELSHI 353
           G+++ A+ L+ +AI +D  C  AYETLGT+EVQR +L+ AV  F KAL  A+ +AEL H+
Sbjct: 500 GDIEAAVTLLNRAIDVDPKCELAYETLGTVEVQRAQLQRAVDLFEKALLYAKSQAELVHV 559

Query: 354 YSLRDAAIAQMKVCERYNI 372
           YSLR+AA+AQ+ V  +  I
Sbjct: 560 YSLRNAALAQINVTRKLGI 578



 Score = 50.4 bits (119), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 25/59 (42%), Positives = 32/59 (54%)

Query: 467 KAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQRHF 525
           K  AD  EAEK+ P+  D Y+QR QI  L  Q E AL   DK + L P   +A  Q+ +
Sbjct: 360 KGLADFAEAEKLKPDNPDVYHQRAQILLLLEQIEAALLEFDKAVRLAPQHAIANVQKCY 418


>gi|193624768|ref|XP_001943918.1| PREDICTED: mitochondrial import receptor subunit TOM70-like
           [Acyrthosiphon pisum]
          Length = 571

 Score =  213 bits (543), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 129/391 (32%), Positives = 209/391 (53%), Gaps = 33/391 (8%)

Query: 1   MFMDR-----GAQHAKEEISKRSFFKPSKQFIKTYLKSFPNDPI-------LQPDGLSNG 48
           MF D      G Q+ +E     +F  P+K FI+ YLKSF  DP        L    ++ G
Sbjct: 199 MFADSVIKSLGKQNLEEYTKHNAFNLPTKIFIENYLKSFSEDPFNDEFPQTLMKSEVNTG 258

Query: 49  VELTNGDTNESHELDLLSKAKRAFEHEDYLTAIRHCTEEIESTSSNHTK-ALARLLRATV 107
           +EL                A +    ++Y      C EE+  T ++  +  LA  L AT 
Sbjct: 259 LEL----------------ALKCINDKNYEQIEDACKEELNKTDNSLIRRTLALNLLATF 302

Query: 108 YIFTSQSTKAIEDLTQLVEDTSVDPKIKVNAHIKRAVVHLHAASDFTKAFADLDEAEKVD 167
            I        +E LT ++E + V  K+ +N+ IKRA V+ H      K+F DL  AE +D
Sbjct: 303 SILRGNYATGVEHLTTVIESSGVPNKLVINSLIKRASVY-HQQEQVEKSFEDLKRAENID 361

Query: 168 PNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQRHFV--VHKMIVPGDRE 225
           PN ++ ++ R QIY L    E+A+    + + LNP F ++  Q  +   +H      + +
Sbjct: 362 PNSSEVFHHRAQIYLLEMNSEKAVEEFKRAVELNPKFILSNVQCCYAQYLHAKHTSNELD 421

Query: 226 RVEQSLKEFRNFVDTHSNVVEACTLFAQVLVDQEDFDGAEEYFNRSIRVDPENASLYVHR 285
             E+ L + + F+  + +  E+ TL+AQ L ++  ++ A+  F +   + PENA+L VHR
Sbjct: 422 -TEKFLNKLKGFIIKYPDYAESYTLYAQALTEKGAYEEADSLFKKVYEIYPENATLLVHR 480

Query: 286 AMLMLQARGNVDEAIKLIEKAISIDKSCMFAYETLGTIEVQRGRLEEAVKCFNKALPLAR 345
           A+++L  + ++ EA   +++AI +D  C +AYETLGT+ +Q G+LEEAV+C  KA+PL++
Sbjct: 481 ALVVLSWKSSISEAFTFLQQAIKVDPKCDYAYETLGTLYIQTGKLEEAVECLEKAVPLSK 540

Query: 346 DEAELSHIYSLRDAAIAQMKVCERYNIKKKV 376
            E EL HI+SLRD+A AQ+ V +R  +  ++
Sbjct: 541 SEKELLHIFSLRDSARAQLAVVKRLGLTPQL 571



 Score = 48.5 bits (114), Expect = 0.009,   Method: Compositional matrix adjust.
 Identities = 22/63 (34%), Positives = 34/63 (53%)

Query: 460 HAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVA 519
           H      K+F DL  AE +DPN ++ ++ R QIY L    E+A+    + + LNP F ++
Sbjct: 342 HQQEQVEKSFEDLKRAENIDPNSSEVFHHRAQIYLLEMNSEKAVEEFKRAVELNPKFILS 401

Query: 520 RAQ 522
             Q
Sbjct: 402 NVQ 404


>gi|195160004|ref|XP_002020866.1| GL14152 [Drosophila persimilis]
 gi|194117816|gb|EDW39859.1| GL14152 [Drosophila persimilis]
          Length = 586

 Score =  213 bits (542), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 132/369 (35%), Positives = 211/369 (57%), Gaps = 11/369 (2%)

Query: 6   GAQHAKEEISKRSFFKPSKQFIKTYLKSFPNDPILQPDGLSNGVELTNGDTNESHELDLL 65
           G   A++ +  R    PS  FI+TYL+SF  DP LQ   L    E    DT     L   
Sbjct: 211 GRTDAEKHMLNRVPVVPSTSFIRTYLQSFVADP-LQTINLPPSTE---ADTPARGFL--- 263

Query: 66  SKAKRAFEHEDYLTAIRHCTEEIESTSSN-HTKALARLLRATVYIFTSQSTKAIEDLTQL 124
            +A  AF  E +   I  CTEEIES+ S    K  A LLR TV++     T++  D   +
Sbjct: 264 -RAHSAFRKEKFEDIIPACTEEIESSESESQYKVEALLLRGTVHLLCGTYTESKLDFDAI 322

Query: 125 VEDTSVDPKIKVNAHIKRAVVHLHAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLF 184
           + +   D  I+  A++KRA +++   +   +A AD D AEK+ P+  D Y+QR QI  L 
Sbjct: 323 IGNVDADDTIRAYAYMKRASLYMQV-NKRDEALADFDAAEKLKPDSPDVYHQRAQILLLL 381

Query: 185 GQYEEALRNLDKTIALNPNFHVARAQRHFVVHKM-IVPGDRERVEQSLKEFRNFVDTHSN 243
                AL   +K + L PN  +A  Q+ +  +++ ++  +++ +E  +++    +D    
Sbjct: 382 DSINPALEQFEKAVRLAPNHAIAYVQKCYTKYRLALMTNNQQGLESVVRQLEQAIDQFPK 441

Query: 244 VVEACTLFAQVLVDQEDFDGAEEYFNRSIRVDPENASLYVHRAMLMLQARGNVDEAIKLI 303
            VE  ++ AQV+ DQ++FD A++Y+++++++ P NA+L+VH+A++ LQ RG+V+ A+  +
Sbjct: 442 CVECYSMLAQVMADQQNFDQAQQYYDKAMKLAPTNAALFVHQAVMTLQWRGDVESAVDTL 501

Query: 304 EKAISIDKSCMFAYETLGTIEVQRGRLEEAVKCFNKALPLARDEAELSHIYSLRDAAIAQ 363
            KAI +D  C  AYETLGT+EVQR  L+ AV+ F +A+  ++   E+ H YSLR+AAIAQ
Sbjct: 502 NKAIELDPRCEQAYETLGTVEVQRANLKRAVELFEQAIRYSKSFEEVVHAYSLRNAAIAQ 561

Query: 364 MKVCERYNI 372
           + V +   I
Sbjct: 562 INVTKNLGI 570



 Score = 48.1 bits (113), Expect = 0.011,   Method: Compositional matrix adjust.
 Identities = 23/60 (38%), Positives = 32/60 (53%)

Query: 467 KAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQRHFV 526
           +A AD D AEK+ P+  D Y+QR QI  L      AL   +K + L PN  +A  Q+ + 
Sbjct: 352 EALADFDAAEKLKPDSPDVYHQRAQILLLLDSINPALEQFEKAVRLAPNHAIAYVQKCYT 411


>gi|198475784|ref|XP_001357159.2| GA19838 [Drosophila pseudoobscura pseudoobscura]
 gi|198137958|gb|EAL34226.2| GA19838 [Drosophila pseudoobscura pseudoobscura]
          Length = 586

 Score =  213 bits (542), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 132/369 (35%), Positives = 211/369 (57%), Gaps = 11/369 (2%)

Query: 6   GAQHAKEEISKRSFFKPSKQFIKTYLKSFPNDPILQPDGLSNGVELTNGDTNESHELDLL 65
           G   A++ +  R    PS  FI+TYL+SF  DP LQ   L    E    DT     L   
Sbjct: 211 GRTDAEKHMLNRVPVVPSTSFIRTYLQSFVADP-LQTINLPPSTE---ADTPARGFL--- 263

Query: 66  SKAKRAFEHEDYLTAIRHCTEEIESTSSN-HTKALARLLRATVYIFTSQSTKAIEDLTQL 124
            +A  AF  E +   I  CTEEIES+ S    K  A LLR TV++     T++  D   +
Sbjct: 264 -RAHSAFRKEKFEDIIPACTEEIESSESESQYKVEALLLRGTVHLLCGTYTESKLDFDAI 322

Query: 125 VEDTSVDPKIKVNAHIKRAVVHLHAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLF 184
           + +   D  I+  A++KRA +++   +   +A AD D AEK+ P+  D Y+QR QI  L 
Sbjct: 323 IGNVDADDTIRAYAYMKRASLYMQV-NKRDEALADFDAAEKLKPDSPDVYHQRAQILLLL 381

Query: 185 GQYEEALRNLDKTIALNPNFHVARAQRHFVVHKM-IVPGDRERVEQSLKEFRNFVDTHSN 243
                AL   +K + L PN  +A  Q+ +  +++ ++  +++ +E  +++    +D    
Sbjct: 382 DSINPALEQFEKAVRLAPNHAIAYVQKCYTKYRLALMTNNQQGLESVVRQLEQAIDQFPK 441

Query: 244 VVEACTLFAQVLVDQEDFDGAEEYFNRSIRVDPENASLYVHRAMLMLQARGNVDEAIKLI 303
            VE  ++ AQV+ DQ++FD A++Y+++++++ P NA+L+VH+A++ LQ RG+V+ A+  +
Sbjct: 442 CVECYSMLAQVMADQQNFDQAQQYYDKAMKLAPTNAALFVHQAVMTLQWRGDVESAVDTL 501

Query: 304 EKAISIDKSCMFAYETLGTIEVQRGRLEEAVKCFNKALPLARDEAELSHIYSLRDAAIAQ 363
            KAI +D  C  AYETLGT+EVQR  L+ AV+ F +A+  ++   E+ H YSLR+AAIAQ
Sbjct: 502 NKAIELDPRCEQAYETLGTVEVQRANLKRAVELFEQAIRYSKSFEEVVHAYSLRNAAIAQ 561

Query: 364 MKVCERYNI 372
           + V +   I
Sbjct: 562 INVTKNLGI 570



 Score = 48.1 bits (113), Expect = 0.011,   Method: Compositional matrix adjust.
 Identities = 23/60 (38%), Positives = 32/60 (53%)

Query: 467 KAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQRHFV 526
           +A AD D AEK+ P+  D Y+QR QI  L      AL   +K + L PN  +A  Q+ + 
Sbjct: 352 EALADFDAAEKLKPDSPDVYHQRAQILLLLDSINPALEQFEKAVRLAPNHAIAYVQKCYT 411


>gi|355725598|gb|AES08607.1| translocase of outer mitochondrial membrane 70-like protein A
           [Mustela putorius furo]
          Length = 581

 Score =  212 bits (540), Expect = 3e-52,   Method: Compositional matrix adjust.
 Identities = 118/333 (35%), Positives = 187/333 (56%), Gaps = 7/333 (2%)

Query: 6   GAQHAKEEISKRSFFKPSKQFIKTYLKSFPNDPILQP---DGLSNGVELTNGDTNESHEL 62
           G + AKE+   R    PS QFIK+Y  SF +D I QP      S+  +   G+ +E  E 
Sbjct: 252 GKEKAKEKYKNREPLMPSPQFIKSYFSSFTDDIISQPMLKGEKSDEDKDKEGEASEVKEN 311

Query: 63  DLLSKAKRAFEHEDYLTAIRHCTEEIESTSSNHTKALARLLRATVYIFTSQSTKAIEDLT 122
               +AK+  E E+Y   I  C++EI++      +AL  LLRAT Y+    +  A  DL 
Sbjct: 312 SGYLRAKQYMEEENYDKIISECSKEIDAQGKYMAEAL--LLRATFYLLIGNANAAKPDLD 369

Query: 123 QLVEDTSVDPKIKVNAHIKRAVVHLHAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYC 182
           Q++     + K++ NA IKR  +++        +  D + A  +DP  AD Y+ RGQ+  
Sbjct: 370 QVISLKEANVKLRANALIKRGSMYMQQQQPLL-STQDFNMAADIDPQNADVYHHRGQLKI 428

Query: 183 LFGQYEEALRNLDKTIALNPNFHVARAQRHFVVHKMIVPGDRE-RVEQSLKEFRNFVDTH 241
           L  Q EEA+ + D+ I L P   +A+AQ+ F +++    G+   +++ ++K F   +   
Sbjct: 429 LLDQVEEAVADFDECIRLRPESALAQAQKCFALYRQAYTGNNSSQIQAAMKGFEEVIKKF 488

Query: 242 SNVVEACTLFAQVLVDQEDFDGAEEYFNRSIRVDPENASLYVHRAMLMLQARGNVDEAIK 301
               E   L+AQ L DQ+ F  A++ +++ I ++P+NA+ YVH+ +L LQ + ++D  ++
Sbjct: 489 PRCAEGYALYAQALTDQQQFGKADDMYDKCIDLEPDNATTYVHKGLLQLQWKQDLDRGLE 548

Query: 302 LIEKAISIDKSCMFAYETLGTIEVQRGRLEEAV 334
           LI KAI ID  C FAYET+GTIEVQRG +E+A+
Sbjct: 549 LISKAIEIDNKCDFAYETMGTIEVQRGNMEKAI 581



 Score = 48.1 bits (113), Expect = 0.011,   Method: Compositional matrix adjust.
 Identities = 23/56 (41%), Positives = 33/56 (58%)

Query: 471 DLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQRHFV 526
           D + A  +DP  AD Y+ RGQ+  L  Q EEA+ + D+ I L P   +A+AQ+ F 
Sbjct: 405 DFNMAADIDPQNADVYHHRGQLKILLDQVEEAVADFDECIRLRPESALAQAQKCFA 460


>gi|193786744|dbj|BAG52067.1| unnamed protein product [Homo sapiens]
          Length = 281

 Score =  210 bits (534), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 107/277 (38%), Positives = 168/277 (60%), Gaps = 2/277 (0%)

Query: 98  ALARLLRATVYIFTSQSTKAIEDLTQLVEDTSVDPKIKVNAHIKRAVVHLHAASDFTKAF 157
           A A LLRAT Y+    +  A  DL +++     + K++ NA IKR  +++          
Sbjct: 2   AEALLLRATFYLLIGNANAAKPDLDKVISLKEANVKLRANALIKRGSMYMQQQQPLLST- 60

Query: 158 ADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQRHFVVHK 217
            D + A  +DP  AD Y+ RGQ+  L  Q EEA+ + D+ I L P   +A+AQ+ F +++
Sbjct: 61  QDFNMAADIDPQNADVYHHRGQLKILLDQVEEAVADFDECIRLRPESALAQAQKCFALYR 120

Query: 218 MIVPGDRE-RVEQSLKEFRNFVDTHSNVVEACTLFAQVLVDQEDFDGAEEYFNRSIRVDP 276
               G+   +++ ++K F   +       E   L+AQ L DQ+ F  A+E +++ I ++P
Sbjct: 121 QAYTGNNSSQIQAAMKGFEEVIKKFPRCAEGYALYAQALTDQQQFGKADEMYDKCIDLEP 180

Query: 277 ENASLYVHRAMLMLQARGNVDEAIKLIEKAISIDKSCMFAYETLGTIEVQRGRLEEAVKC 336
           +NA+ YVH+ +L LQ + ++D  ++LI KAI ID  C FAYET+GTIEVQRG +E+A+  
Sbjct: 181 DNATTYVHKGLLQLQWKQDLDRGLELISKAIEIDNKCDFAYETMGTIEVQRGNMEKAIDM 240

Query: 337 FNKALPLARDEAELSHIYSLRDAAIAQMKVCERYNIK 373
           FNKA+ LA+ E E++H+YSL DAA AQ +V ++Y +K
Sbjct: 241 FNKAINLAKSEMEMAHLYSLCDAAHAQTEVAKKYGLK 277



 Score = 48.1 bits (113), Expect = 0.012,   Method: Compositional matrix adjust.
 Identities = 23/56 (41%), Positives = 33/56 (58%)

Query: 471 DLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQRHFV 526
           D + A  +DP  AD Y+ RGQ+  L  Q EEA+ + D+ I L P   +A+AQ+ F 
Sbjct: 62  DFNMAADIDPQNADVYHHRGQLKILLDQVEEAVADFDECIRLRPESALAQAQKCFA 117


>gi|196004626|ref|XP_002112180.1| hypothetical protein TRIADDRAFT_24576 [Trichoplax adhaerens]
 gi|190586079|gb|EDV26147.1| hypothetical protein TRIADDRAFT_24576 [Trichoplax adhaerens]
          Length = 567

 Score =  209 bits (531), Expect = 4e-51,   Method: Compositional matrix adjust.
 Identities = 135/362 (37%), Positives = 200/362 (55%), Gaps = 10/362 (2%)

Query: 6   GAQHAKEEISKRSFFKPSKQFIKTYLKSFPNDPILQPDGLSNGVELTNGDTNESHELDLL 65
           G   AK+  ++R +F PS  FI+TYL+SF N       G  N   +    T    E D  
Sbjct: 203 GKIEAKQRFAERQYFLPSTAFIQTYLESFAN-------GKKNNDIILFNFTTAFEEDDYF 255

Query: 66  SKAKRAFEHEDYLTAIRHCTEEIESTSSNHTKALARLLRATVYIFTSQSTKAIEDLTQLV 125
             A+      +Y   I +CT+EI+   S + +A A  LR T+ +  + S  A+ED  +++
Sbjct: 256 LIARYNLSQCNYENIIDYCTKEIDKDFSPY-RAEAYALRGTLRLLMTDSDSALEDFDKVL 314

Query: 126 EDTSVDPKIKVNAHIKRAVVHLHAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFG 185
           E     P++KVNA IKRA   L       +A AD   A ++DP   D YY RGQ Y L  
Sbjct: 315 EFDDGSPRVKVNALIKRASYKLQQEKT-NEAIADFSSALELDPENCDIYYHRGQAYFLLE 373

Query: 186 QYEEALRNLDKTIALNPNFHVARAQRHFVVHKMIVPGDRER-VEQSLKEFRNFVDTHSNV 244
           +  +A+ +  K+  LN NF  A     +  +K  V       VE+S+K F + ++ + N 
Sbjct: 374 RLSDAMLDFQKSYELNENFSQAYVHLGYARYKSAVTQQSPSLVEKSIKTFEDALEKYPNS 433

Query: 245 VEACTLFAQVLVDQEDFDGAEEYFNRSIRVDPENASLYVHRAMLMLQARGNVDEAIKLIE 304
            +A +L+AQ+L DQ+    A+E F+++I + P   S YVH+ +L +Q + +++  IKLIE
Sbjct: 434 ADAVSLYAQILQDQQQLQKADELFDKAISIRPNFPSYYVHKGVLQVQLKQDIEAGIKLIE 493

Query: 305 KAISIDKSCMFAYETLGTIEVQRGRLEEAVKCFNKALPLARDEAELSHIYSLRDAAIAQM 364
           KAI +D  C FAYETL T+EVQRG ++  ++ F KAL LAR E++LSH  SL  AA  Q+
Sbjct: 494 KAIELDNKCDFAYETLATVEVQRGNIDRGIELFEKALNLARAESDLSHTLSLLIAAQTQI 553

Query: 365 KV 366
           KV
Sbjct: 554 KV 555



 Score = 42.4 bits (98), Expect = 0.70,   Method: Compositional matrix adjust.
 Identities = 21/53 (39%), Positives = 29/53 (54%)

Query: 467 KAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVA 519
           +A AD   A ++DP   D YY RGQ Y L  +  +A+ +  K+  LN NF  A
Sbjct: 343 EAIADFSSALELDPENCDIYYHRGQAYFLLERLSDAMLDFQKSYELNENFSQA 395


>gi|432856476|ref|XP_004068440.1| PREDICTED: mitochondrial import receptor subunit TOM70-like
           [Oryzias latipes]
          Length = 536

 Score =  207 bits (526), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 124/374 (33%), Positives = 190/374 (50%), Gaps = 52/374 (13%)

Query: 6   GAQHAKEEISKRSFFKPSKQFIKTYLKSFPNDPILQPDGLSNGVELTNGDTNESHELDLL 65
           G + AKE+   R    PS QFIK+Y  SF +D I QP  L  G +      NE     + 
Sbjct: 205 GKEKAKEKYKNREPMMPSPQFIKSYFSSFTDDIISQP--LQKGEKKDEDKDNEGEAAQVT 262

Query: 66  S-----KAKRAFEHEDYLTAIRHCTEEIESTSSNHTKALARLLRATVYIFTSQSTKAIED 120
                 KAK+  E E+Y   I  CT+E                                 
Sbjct: 263 ESSGYLKAKQYMEEENYDKIISECTKEXXX------------------------------ 292

Query: 121 LTQLVEDTSVDPKIKVNAHIKRAVVHLHAASDFTKAFADLDEAEKVDPNVADSYYQRGQI 180
                        ++ NA IKR  +++        +  D + A ++D    D Y+ RGQ+
Sbjct: 293 -------------LQANALIKRGSMYMQQQQPVL-STQDFNTAAEIDKRNPDVYHHRGQL 338

Query: 181 YCLFGQYEEALRNLDKTIALNPNFHVARAQRHFVVHKMIVPGDRE-RVEQSLKEFRNFVD 239
             L  Q ++A+ + D+ I L P+  +A+AQ+ F +++    G+   RV+ ++  F + + 
Sbjct: 339 KILLDQVDDAVADFDECILLRPDSALAQAQKCFALYRQAYTGNNPTRVQTAMDGFEDVIR 398

Query: 240 THSNVVEACTLFAQVLVDQEDFDGAEEYFNRSIRVDPENASLYVHRAMLMLQARGNVDEA 299
                 E   L+AQ L DQ+ F  A+E +++ I ++P+NA+ YVH+ +L LQ + ++D  
Sbjct: 399 RFPKCAEGYALYAQALTDQQQFGKADEMYDKCIELEPDNATTYVHKGLLQLQWKQDLDLG 458

Query: 300 IKLIEKAISIDKSCMFAYETLGTIEVQRGRLEEAVKCFNKALPLARDEAELSHIYSLRDA 359
           + LI KAI ID  C FAYET+GTIEVQRG L+ A++ FNKA+ LA+ E E++H+YSL DA
Sbjct: 459 LDLISKAIEIDNKCDFAYETMGTIEVQRGNLDRAIEMFNKAINLAKSEMEMAHLYSLCDA 518

Query: 360 AIAQMKVCERYNIK 373
           A AQ +V  +Y +K
Sbjct: 519 AYAQTEVARKYGLK 532



 Score = 41.2 bits (95), Expect = 1.5,   Method: Compositional matrix adjust.
 Identities = 19/56 (33%), Positives = 33/56 (58%)

Query: 471 DLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQRHFV 526
           D + A ++D    D Y+ RGQ+  L  Q ++A+ + D+ I L P+  +A+AQ+ F 
Sbjct: 317 DFNTAAEIDKRNPDVYHHRGQLKILLDQVDDAVADFDECILLRPDSALAQAQKCFA 372


>gi|149060322|gb|EDM11036.1| translocase of outer mitochondrial membrane 70 homolog A (yeast),
           isoform CRA_b [Rattus norvegicus]
          Length = 561

 Score =  206 bits (524), Expect = 3e-50,   Method: Compositional matrix adjust.
 Identities = 124/352 (35%), Positives = 189/352 (53%), Gaps = 44/352 (12%)

Query: 25  QFIKTYLKSFPNDPILQP---DGLSNGVELTNGDTNESHELDLLSKAKRAFEHEDYLTAI 81
           +FIK+Y  SF +D I QP      S+  +   G+  E  E     KAK+  E E+Y   I
Sbjct: 247 KFIKSYFSSFTDDIISQPMLKGEKSDEDKDKEGEALEVKENSGYLKAKQYMEEENYDKII 306

Query: 82  RHCTEEIESTSSNHTKALARLLRATVYIFTSQSTKAIEDLTQLVEDTSVDPKIKVNAHIK 141
             C++EI++      +AL  LLRAT Y+    +  A  DL +++     + K++ NA IK
Sbjct: 307 SECSKEIDAQGKYMAEAL--LLRATFYLLIGSANAAKPDLDKVISLKEANVKLRANALIK 364

Query: 142 RAVVHLHAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALN 201
           R  + +        +  D + A ++DP  +D Y+ RGQ+  L    EEA+ + D  I L 
Sbjct: 365 RGTMCMQQQQPML-STQDFNMAAEIDPMNSDVYHHRGQLKILLDLVEEAVADFDACIRLR 423

Query: 202 PNFHVARAQRHFVVHKMIVPGDRERVEQSLKEFRNFVDTHSNVVEACTLFAQVLVDQEDF 261
           P F +A+AQ+                                       FA  L DQ+ F
Sbjct: 424 PKFALAQAQK--------------------------------------CFALALTDQQQF 445

Query: 262 DGAEEYFNRSIRVDPENASLYVHRAMLMLQARGNVDEAIKLIEKAISIDKSCMFAYETLG 321
             A+E +++ I ++P+NA+ YVH+ +L LQ + ++D+ ++LI KAI ID  C FAYET+G
Sbjct: 446 GKADEMYDKCIDLEPDNATTYVHKGLLQLQWKQDLDKGLELISKAIEIDNKCDFAYETMG 505

Query: 322 TIEVQRGRLEEAVKCFNKALPLARDEAELSHIYSLRDAAIAQMKVCERYNIK 373
           TIEVQRG +E+A+  FNKA+ LA+ E E++H+YSL DAA AQ +V ++Y +K
Sbjct: 506 TIEVQRGNMEKAIDMFNKAINLAKSEMEMAHLYSLCDAAHAQTEVAKKYGLK 557



 Score = 48.9 bits (115), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 25/71 (35%), Positives = 38/71 (53%)

Query: 471 DLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQRHFVWTST 530
           D + A ++DP  +D Y+ RGQ+  L    EEA+ + D  I L P F +A+AQ+ F    T
Sbjct: 381 DFNMAAEIDPMNSDVYHHRGQLKILLDLVEEAVADFDACIRLRPKFALAQAQKCFALALT 440

Query: 531 LAELMAFSDEF 541
             +    +DE 
Sbjct: 441 DQQQFGKADEM 451


>gi|148665751|gb|EDK98167.1| translocase of outer mitochondrial membrane 70 homolog A (yeast)
           [Mus musculus]
          Length = 562

 Score =  206 bits (523), Expect = 4e-50,   Method: Compositional matrix adjust.
 Identities = 124/352 (35%), Positives = 189/352 (53%), Gaps = 44/352 (12%)

Query: 25  QFIKTYLKSFPNDPILQP---DGLSNGVELTNGDTNESHELDLLSKAKRAFEHEDYLTAI 81
           +FIK+Y  SF +D I QP      S+  +   G+  E  E     KAK+  E E+Y   I
Sbjct: 248 KFIKSYFSSFTDDIISQPMLKGEKSDEDKDKEGEALEVKENSGYLKAKQYMEEENYDKII 307

Query: 82  RHCTEEIESTSSNHTKALARLLRATVYIFTSQSTKAIEDLTQLVEDTSVDPKIKVNAHIK 141
             C++EI++      +AL  LLRAT Y+    +  A  DL +++     + K++ NA IK
Sbjct: 308 SECSKEIDAQGKYMAEAL--LLRATFYLLIGSANAAKPDLDKVISLKEANVKLRANALIK 365

Query: 142 RAVVHLHAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALN 201
           R  + +        +  D + A ++DP  +D Y+ RGQ+  L    EEA+ + D  I L 
Sbjct: 366 RGTMCMQQQQPML-STQDFNMAAEIDPMNSDVYHHRGQLKILLDLVEEAVADFDACIRLR 424

Query: 202 PNFHVARAQRHFVVHKMIVPGDRERVEQSLKEFRNFVDTHSNVVEACTLFAQVLVDQEDF 261
           P F +A+AQ+                                       FA  L DQ+ F
Sbjct: 425 PKFALAQAQK--------------------------------------CFALALTDQQQF 446

Query: 262 DGAEEYFNRSIRVDPENASLYVHRAMLMLQARGNVDEAIKLIEKAISIDKSCMFAYETLG 321
             A+E +++ I ++P+NA+ YVH+ +L LQ + ++D+ ++LI KAI ID  C FAYET+G
Sbjct: 447 GKADEMYDKCIDLEPDNATTYVHKGLLQLQWKQDLDKGLELISKAIEIDNKCDFAYETMG 506

Query: 322 TIEVQRGRLEEAVKCFNKALPLARDEAELSHIYSLRDAAIAQMKVCERYNIK 373
           TIEVQRG +E+A+  FNKA+ LA+ E E++H+YSL DAA AQ +V ++Y +K
Sbjct: 507 TIEVQRGNMEKAIDMFNKAINLAKSEMEMAHLYSLCDAAHAQTEVAKKYGLK 558



 Score = 48.9 bits (115), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 25/71 (35%), Positives = 38/71 (53%)

Query: 471 DLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQRHFVWTST 530
           D + A ++DP  +D Y+ RGQ+  L    EEA+ + D  I L P F +A+AQ+ F    T
Sbjct: 382 DFNMAAEIDPMNSDVYHHRGQLKILLDLVEEAVADFDACIRLRPKFALAQAQKCFALALT 441

Query: 531 LAELMAFSDEF 541
             +    +DE 
Sbjct: 442 DQQQFGKADEM 452


>gi|198429123|ref|XP_002127856.1| PREDICTED: hypothetical protein isoform 1 [Ciona intestinalis]
          Length = 595

 Score =  205 bits (521), Expect = 6e-50,   Method: Compositional matrix adjust.
 Identities = 126/373 (33%), Positives = 213/373 (57%), Gaps = 6/373 (1%)

Query: 6   GAQHAKEEISKRSFFKPSKQFIKTYLKSFPND---PILQPDGLSNGVELTNGDTNESHEL 62
           G + A+++   R    PS  FIK Y  SF +D    +L  +  S+      G + +  + 
Sbjct: 217 GKEKAEKKYKNRKPMMPSPIFIKQYFASFNDDLISAVLTEEQRSSADNRWVGLSVKVSQH 276

Query: 63  DLLSKAKRAFEHEDYLTAIRHCTEEIESTSSNHTKAL-ARLLRATVYIFTSQSTKAIEDL 121
               +AK A E  +Y T I+ C+ EI S  +  +    A LLR T Y+ +  S +A  DL
Sbjct: 277 SGYIRAKIALEDGNYSTVIQECSAEINSKDAAPSYLPDALLLRGTFYLLSGNSDEAKPDL 336

Query: 122 TQLVEDTSVDPKIKVNAHIKRAVVHLHAASDFTKAFADLDEAEKVDPNVADSYYQRGQIY 181
            ++++     PK++ NA IKR  + +        A  D + A ++D    D ++ RGQ+ 
Sbjct: 337 DRVIDMKQAHPKLRANALIKRGSMSMQLQKP-EDAETDFELAVQIDQENCDVFHHRGQLN 395

Query: 182 CLFGQYEEALRNLDKTIALNPNFHVARAQRHFVVHKMI-VPGDRERVEQSLKEFRNFVDT 240
            L  + + AL + DK IALNPNF +A AQR + +++      D  + E+++ +F + +  
Sbjct: 396 ILLDKVDLALADFDKCIALNPNFAMAHAQRCYTMYRQSHSKKDVVKTEEAMNKFNDIISQ 455

Query: 241 HSNVVEACTLFAQVLVDQEDFDGAEEYFNRSIRVDPENASLYVHRAMLMLQARGNVDEAI 300
           + +  E   L+AQ   D  +F+ A+  F  +I+++P+NA+L+VHR +L LQ + +V++A+
Sbjct: 456 YPHCSETYGLYAQAQTDCGNFEKADSLFQDAIKIEPDNATLFVHRGLLALQWKQDVEKAV 515

Query: 301 KLIEKAISIDKSCMFAYETLGTIEVQRGRLEEAVKCFNKALPLARDEAELSHIYSLRDAA 360
            LI KA+ ID+ C FA+ET+GTIEVQRG LE+A K F  ++  A+ E E++H+Y+L+ AA
Sbjct: 516 SLISKALEIDEKCDFAHETMGTIEVQRGNLEKACKHFAVSIDFAKSELEMAHLYALQAAA 575

Query: 361 IAQMKVCERYNIK 373
           +AQ  + ++Y ++
Sbjct: 576 LAQGNIAKKYGLR 588



 Score = 48.9 bits (115), Expect = 0.008,   Method: Compositional matrix adjust.
 Identities = 24/59 (40%), Positives = 35/59 (59%)

Query: 468 AFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQRHFV 526
           A  D + A ++D    D ++ RGQ+  L  + + AL + DK IALNPNF +A AQR + 
Sbjct: 370 AETDFELAVQIDQENCDVFHHRGQLNILLDKVDLALADFDKCIALNPNFAMAHAQRCYT 428


>gi|156395802|ref|XP_001637299.1| predicted protein [Nematostella vectensis]
 gi|156224410|gb|EDO45236.1| predicted protein [Nematostella vectensis]
          Length = 565

 Score =  204 bits (520), Expect = 7e-50,   Method: Compositional matrix adjust.
 Identities = 134/376 (35%), Positives = 213/376 (56%), Gaps = 16/376 (4%)

Query: 1   MFMDRGAQHAKEEISKRSFFKPSKQFIKTYLKSFPNDPILQPDGLSNGVELTNGDTNESH 60
           +  D G Q AKE    R    PS  +IK YL+SF  D I      S+ ++  +   N+S 
Sbjct: 196 VLKDIGRQKAKEHFKNRKPTIPSPTYIKAYLESFSQDEIF-----SDDLQGQDDVPNDSP 250

Query: 61  ELDLLSKAKRAFEHEDYLTAIRHCTEEI-ESTSSNHTKALARLLRATVYIFTSQSTKAIE 119
            L  L + K     + +   I  C +EI    S  + +A+A  LR T++   SQ  +AI+
Sbjct: 251 FLAALEEIK----EKRFDKVIDLCDDEINRGPSPCYARAMA--LRGTMHTLMSQVKEAID 304

Query: 120 DLTQLVE--DTSVDPKIKVNAHIKRAVVHLHAASDFTKAFADLDEAEKVDPNVADSYYQR 177
           DLTQ+++  D     K+K+N  IKR  +H+    +  +A  D  +A  +DPN +D Y+ R
Sbjct: 305 DLTQVIDMDDDKASTKLKINCLIKRGSLHIQETRE-AEADQDFKKAILLDPNNSDIYHHR 363

Query: 178 GQIYCLFGQYEEALRNLDKTIALNPNFHVARAQRHFVVHKMIVPGDRERVEQ-SLKEFRN 236
            QI+ L  +  EA  + +K+I LNP+F  AR Q  + ++K  V      + + +L+ F  
Sbjct: 364 AQIHFLTEKIAEAKEDFEKSIKLNPDFIPARIQLAYCIYKTAVFQQNAVLARGALELFEE 423

Query: 237 FVDTHSNVVEACTLFAQVLVDQEDFDGAEEYFNRSIRVDPENASLYVHRAMLMLQARGNV 296
               + +  +A +L AQVL +Q  F+ A E F+ +I++ PEN    V++ +LM+Q + + 
Sbjct: 424 ISTNNPDNPDALSLHAQVLQEQGQFEEACEKFDTAIKLQPENPVHKVYKGLLMVQWKQDF 483

Query: 297 DEAIKLIEKAISIDKSCMFAYETLGTIEVQRGRLEEAVKCFNKALPLARDEAELSHIYSL 356
            ++++L+ +AISID  C FAYETL T+EVQRG LE++V+ F+KA+ L R E E++  +SL
Sbjct: 484 GKSVELVNEAISIDSKCDFAYETLATLEVQRGNLEKSVELFDKAIDLVRTEGEMAQTFSL 543

Query: 357 RDAAIAQMKVCERYNI 372
           R+AAIAQ  V ++  I
Sbjct: 544 REAAIAQHHVTKKMGI 559



 Score = 45.1 bits (105), Expect = 0.10,   Method: Compositional matrix adjust.
 Identities = 29/76 (38%), Positives = 41/76 (53%), Gaps = 8/76 (10%)

Query: 448 KYGNLE-NESGQKHAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNL 506
           K G+L   E+ +  A  DF KA         +DPN +D Y+ R QI+ L  +  EA  + 
Sbjct: 328 KRGSLHIQETREAEADQDFKKAIL-------LDPNNSDIYHHRAQIHFLTEKIAEAKEDF 380

Query: 507 DKTIALNPNFHVARAQ 522
           +K+I LNP+F  AR Q
Sbjct: 381 EKSIKLNPDFIPARIQ 396


>gi|443696254|gb|ELT97004.1| hypothetical protein CAPTEDRAFT_174469 [Capitella teleta]
          Length = 622

 Score =  202 bits (515), Expect = 3e-49,   Method: Compositional matrix adjust.
 Identities = 124/402 (30%), Positives = 209/402 (51%), Gaps = 36/402 (8%)

Query: 6   GAQHAKEEISKRSFFKPSKQFIKTYLKSFPNDPILQ-----------------PD----- 43
           G Q A+E    R    PS QFI+TY  +F NDPIL+                 P+     
Sbjct: 212 GKQRAQEAYKDRQPVAPSSQFIRTYFSAFANDPILENLKEKLAAVESAYKPAAPEPKEAE 271

Query: 44  --GLSNGVELTNGDTNES--HELDLLSKAK--------RAFEHEDYLTAIRHCTEEIEST 91
                  V+ +  D   S   ELD   +A         R+   E+Y   I  C   I++ 
Sbjct: 272 ASQAEEEVKESGDDAGASSAEELDQEEQACTEKYLILLRSLAQENYTGVIEKCRAVIDAG 331

Query: 92  SSNHTKALARLLRATVYIFTSQSTKAIEDLTQLVEDTSVDPKIKVNAHIKRAVVHLHAAS 151
           S       A LL AT  +   +  KA  +LT+L+  T + P+I+ NA IK+  +H+    
Sbjct: 332 SKCRYVPEALLLHATFLLLHGEGEKAATELTELLARTDLTPRIRSNALIKKGSLHMQNGL 391

Query: 152 DFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQR 211
                        KVDP  +D Y+ RGQ++ L  + E A+ + + +++L P F +A  Q+
Sbjct: 392 QAEALEEFAAAV-KVDPKNSDIYHHRGQLHLLIDKVEAAVSDFEHSVSLRPEFAIAYVQK 450

Query: 212 HFVVHKMIVPGDRE-RVEQSLKEFRNFVDTHSNVVEACTLFAQVLVDQEDFDGAEEYFNR 270
            +  +++        +++ +LK F   +    +  E   L+ Q L DQ+ ++ A E F +
Sbjct: 451 CYTEYRLAFTNRSPLQMQNALKSFEETIAKFPDCSEGYALYGQALNDQQMYEKANETFQK 510

Query: 271 SIRVDPENASLYVHRAMLMLQARGNVDEAIKLIEKAISIDKSCMFAYETLGTIEVQRGRL 330
           +I ++P+N ++YVH+ +L LQ + +++EA +L+ KA+ +D+ C FAYETLGTIE+QRG +
Sbjct: 511 AISLEPDNGNIYVHKGLLQLQWKQDIEEAARLMNKALEVDRGCEFAYETLGTIEIQRGNI 570

Query: 331 EEAVKCFNKALPLARDEAELSHIYSLRDAAIAQMKVCERYNI 372
           + A+  F++A+ LA+ + E++H++SL++AA+ Q KV  R  +
Sbjct: 571 DTAISLFDQAIKLAKTQVEMAHLFSLKEAALTQNKVARRLGM 612



 Score = 42.7 bits (99), Expect = 0.54,   Method: Compositional matrix adjust.
 Identities = 17/50 (34%), Positives = 31/50 (62%)

Query: 477 KVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQRHFV 526
           KVDP  +D Y+ RGQ++ L  + E A+ + + +++L P F +A  Q+ + 
Sbjct: 404 KVDPKNSDIYHHRGQLHLLIDKVEAAVSDFEHSVSLRPEFAIAYVQKCYT 453


>gi|198429121|ref|XP_002127891.1| PREDICTED: hypothetical protein isoform 2 [Ciona intestinalis]
          Length = 600

 Score =  202 bits (514), Expect = 4e-49,   Method: Compositional matrix adjust.
 Identities = 127/387 (32%), Positives = 212/387 (54%), Gaps = 29/387 (7%)

Query: 6   GAQHAKEEISKRSFFKPSKQFIKTYLKSFPNDPILQPDGLSNGVELTNGDTNESHELDLL 65
           G + A+++   R    PS  FIK Y  SF +D I           LT    + +     +
Sbjct: 217 GKEKAEKKYKNRKPMMPSPIFIKQYFASFNDDLI--------SAVLTEEQRSSADNSGYI 268

Query: 66  SKAKRAFEHEDYLTAIRHCTEEIESTSSNHTKALAR------------------LLRATV 107
            +AK A E  +Y T I+ C+ EI S+ ++ T   A                   LLR T 
Sbjct: 269 -RAKIALEDGNYSTVIQECSAEINSSGNDDTPHEAEFTQEKTEDAAPSYLPDALLLRGTF 327

Query: 108 YIFTSQSTKAIEDLTQLVEDTSVDPKIKVNAHIKRAVVHLHAASDFTKAFADLDEAEKVD 167
           Y+ +  S +A  DL ++++     PK++ NA IKR  + +        A  D + A ++D
Sbjct: 328 YLLSGNSDEAKPDLDRVIDMKQAHPKLRANALIKRGSMSMQLQKP-EDAETDFELAVQID 386

Query: 168 PNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQRHFVVHKMI-VPGDRER 226
               D ++ RGQ+  L  + + AL + DK IALNPNF +A AQR + +++      D  +
Sbjct: 387 QENCDVFHHRGQLNILLDKVDLALADFDKCIALNPNFAMAHAQRCYTMYRQSHSKKDVVK 446

Query: 227 VEQSLKEFRNFVDTHSNVVEACTLFAQVLVDQEDFDGAEEYFNRSIRVDPENASLYVHRA 286
            E+++ +F + +  + +  E   L+AQ   D  +F+ A+  F  +I+++P+NA+L+VHR 
Sbjct: 447 TEEAMNKFNDIISQYPHCSETYGLYAQAQTDCGNFEKADSLFQDAIKIEPDNATLFVHRG 506

Query: 287 MLMLQARGNVDEAIKLIEKAISIDKSCMFAYETLGTIEVQRGRLEEAVKCFNKALPLARD 346
           +L LQ + +V++A+ LI KA+ ID+ C FA+ET+GTIEVQRG LE+A K F  ++  A+ 
Sbjct: 507 LLALQWKQDVEKAVSLISKALEIDEKCDFAHETMGTIEVQRGNLEKACKHFAVSIDFAKS 566

Query: 347 EAELSHIYSLRDAAIAQMKVCERYNIK 373
           E E++H+Y+L+ AA+AQ  + ++Y ++
Sbjct: 567 ELEMAHLYALQAAALAQGNIAKKYGLR 593



 Score = 48.5 bits (114), Expect = 0.008,   Method: Compositional matrix adjust.
 Identities = 24/59 (40%), Positives = 35/59 (59%)

Query: 468 AFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQRHFV 526
           A  D + A ++D    D ++ RGQ+  L  + + AL + DK IALNPNF +A AQR + 
Sbjct: 375 AETDFELAVQIDQENCDVFHHRGQLNILLDKVDLALADFDKCIALNPNFAMAHAQRCYT 433


>gi|427794331|gb|JAA62617.1| Putative translocase of outer mitochondrial membrane complex
           subunit, partial [Rhipicephalus pulchellus]
          Length = 590

 Score =  199 bits (506), Expect = 3e-48,   Method: Compositional matrix adjust.
 Identities = 131/409 (32%), Positives = 208/409 (50%), Gaps = 49/409 (11%)

Query: 6   GAQHAKEEISKRSFFKPSKQFIKTYLKSFPNDPILQP-DGLSNGVELTNGDTNESHELDL 64
           G   AKE I+ R    PSK FI+ Y  SF  DP+++       G      D+        
Sbjct: 182 GKASAKELITNREPVLPSKHFIRNYFVSFCEDPVIKAVQAHREGKPFPKSDSPGG----A 237

Query: 65  LSKAKRAFEHEDYLTAIRHCTEEIESTSSNHTKALARLLRATVYIFTSQSTKAIEDLTQL 124
            ++A      E Y   I HCT+EI++      +AL  LLR T+ +    S   I+DL ++
Sbjct: 238 YAQAVECLADEKYEDVIEHCTKEIQNEGEALAEAL--LLRGTLRMLQGLSQSTIDDLNRV 295

Query: 125 VEDTSVDPKIKVNAHIKRAVVHLHAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLF 184
           ++  S   K++VNA IK   + +HA     +A  D ++A   DP+ AD +  RGQ+  L 
Sbjct: 296 LQMDSASLKVRVNALIKLGTLKVHA-EKLEEALEDFEQAATQDPSNADVFLHRGQVLLLL 354

Query: 185 ---------------------------------GQ-------YEEALRNLDKTIALNPNF 204
                                            GQ        E+ LR+++++++L P+F
Sbjct: 355 DRLEDTLKDMERSVSLRPDFPSAAAXXXXXLHRGQVLLLLDRLEDTLRDMERSVSLRPDF 414

Query: 205 HVARAQRHFVVHKM-IVPGDRERVEQSLKEFRNFVDTHSNVVEACTLFAQVLVDQEDFDG 263
             A AQR +V ++      D  +  ++L++F        N  E   L AQ+L + ++F+ 
Sbjct: 415 PSAAAQRCYVQYRYGAATKDASKQMEALQDFEEVQQRFPNCPECYFLHAQILSENKEFER 474

Query: 264 AEEYFNRSIRVDPENASLYVHRAMLMLQARGNVDEAIKLIEKAISIDKSCMFAYETLGTI 323
           AEE F ++ + DP + ++ VH  +L LQ   + D+A++ + KAI +D  C FA+ETLG++
Sbjct: 475 AEENFLKAQKADPTDPNVPVHLGILHLQWTQDFDKAVEFMNKAIEMDDKCQFAHETLGSV 534

Query: 324 EVQRGRLEEAVKCFNKALPLARDEAELSHIYSLRDAAIAQMKVCERYNI 372
           +VQRG+L+E +  F KA+ LA+ EAEL+H+ SLRDAA AQ KV +R  +
Sbjct: 535 QVQRGQLDEGLAHFEKAISLAQTEAELAHLLSLRDAAEAQGKVAKRLGM 583



 Score = 44.7 bits (104), Expect = 0.12,   Method: Compositional matrix adjust.
 Identities = 19/60 (31%), Positives = 36/60 (60%)

Query: 462 ASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARA 521
           A    +A  D ++A   DP+ AD +  RGQ+  L  + E+ L++++++++L P+F  A A
Sbjct: 320 AEKLEEALEDFEQAATQDPSNADVFLHRGQVLLLLDRLEDTLKDMERSVSLRPDFPSAAA 379


>gi|289739377|gb|ADD18436.1| translocase of outer membrane 70 [Glossina morsitans morsitans]
          Length = 526

 Score =  198 bits (504), Expect = 5e-48,   Method: Compositional matrix adjust.
 Identities = 128/335 (38%), Positives = 198/335 (59%), Gaps = 11/335 (3%)

Query: 1   MFMDR-----GAQHAKEEISKRSFFKPSKQFIKTYLKSFPNDPILQPDGLSNGVELTNGD 55
           M+ DR     G + A++ +  R    PSK FI TYL+SF  DP LQ +   +  E+T+  
Sbjct: 196 MYADRVLKQTGREDAEKGMKDRVPMLPSKNFINTYLRSFVADP-LQAN--LSATEVTDLL 252

Query: 56  TNESHELDLLSKAKRAFEHEDYLTAIRHCTEEIESTSSNHTKAL-ARLLRATVYIFTSQS 114
             +   L   ++AK A + + Y   I  CTEEIES+ S       A LLR T ++ +   
Sbjct: 253 NTKDDRLYGFARAKHAMDKQRYDEIIPACTEEIESSESESQYKSEALLLRGTFHLLSGSF 312

Query: 115 TKAIEDLTQLVEDTSVDPKIKVNAHIKRAVVHLHAASDFTKAFADLDEAEKVDPNVADSY 174
           T+A +DL  ++ +   D K++  A IKRA +H+    +  +  AD D+ +K+ P+  D Y
Sbjct: 313 TEAKQDLDAVINNADADVKLRAYALIKRASLHIQL-EEKDQGLADFDQVQKLQPDNPDLY 371

Query: 175 YQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQRHFVVHKM-IVPGDRERVEQSLKE 233
           +QR QIY L  Q  EAL+  +K I + PN  +A  Q+ +  +++ ++ GD+ R+   + E
Sbjct: 372 HQRAQIYILLDQLNEALQEYEKAIKIAPNNAMAYVQKCYAEYRLGLLSGDQMRLLMIMNE 431

Query: 234 FRNFVDTHSNVVEACTLFAQVLVDQEDFDGAEEYFNRSIRVDPENASLYVHRAMLMLQAR 293
           FRN ++     VE  +L AQVL DQ+ F  A++++ ++I++ PENASL VHR ++MLQ +
Sbjct: 432 FRNAIEKFPGCVECYSLMAQVLSDQQQFQQADQFYEKAIKMAPENASLLVHRGIMMLQWK 491

Query: 294 GNVDEAIKLIEKAISIDKSCMFAYETLGTIEVQRG 328
           G++DEAI L++ AI +D  C  AYETLGT+EVQR 
Sbjct: 492 GDIDEAINLMQHAIDVDDKCELAYETLGTVEVQRA 526



 Score = 50.4 bits (119), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 23/60 (38%), Positives = 35/60 (58%)

Query: 467 KAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQRHFV 526
           +  AD D+ +K+ P+  D Y+QR QIY L  Q  EAL+  +K I + PN  +A  Q+ + 
Sbjct: 352 QGLADFDQVQKLQPDNPDLYHQRAQIYILLDQLNEALQEYEKAIKIAPNNAMAYVQKCYA 411


>gi|193786739|dbj|BAG52062.1| unnamed protein product [Homo sapiens]
          Length = 233

 Score =  187 bits (476), Expect = 9e-45,   Method: Compositional matrix adjust.
 Identities = 90/216 (41%), Positives = 140/216 (64%), Gaps = 1/216 (0%)

Query: 159 DLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQRHFVVHKM 218
           D + A  +DP  AD Y+ RGQ+  L  Q EEA+ + D+ I L P   +A+AQ+ F +++ 
Sbjct: 14  DFNMAADIDPQNADVYHHRGQLKILLDQVEEAVADFDECIRLRPESALAQAQKCFALYRQ 73

Query: 219 IVPGDRE-RVEQSLKEFRNFVDTHSNVVEACTLFAQVLVDQEDFDGAEEYFNRSIRVDPE 277
              G+   +++ ++K F   +       E   L+AQ L DQ+ F  A+E +++ I ++P+
Sbjct: 74  AYTGNNSSQIQAAMKGFEEVIKKFPRCAEGYALYAQALTDQQQFGKADEMYDKCIDLEPD 133

Query: 278 NASLYVHRAMLMLQARGNVDEAIKLIEKAISIDKSCMFAYETLGTIEVQRGRLEEAVKCF 337
           NA+ YVH+ +L LQ + ++D  ++LI KAI ID  C FAYET+GTIEVQRG +E+A+  F
Sbjct: 134 NATTYVHKGLLQLQWKQDLDRGLELISKAIEIDNKCDFAYETMGTIEVQRGNMEKAIDMF 193

Query: 338 NKALPLARDEAELSHIYSLRDAAIAQMKVCERYNIK 373
           NKA+ LA+ E E++H+YSL DAA AQ +V ++Y +K
Sbjct: 194 NKAINLAKSEMEMAHLYSLCDAAHAQTEVAKKYGLK 229



 Score = 47.8 bits (112), Expect = 0.014,   Method: Compositional matrix adjust.
 Identities = 23/56 (41%), Positives = 33/56 (58%)

Query: 471 DLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQRHFV 526
           D + A  +DP  AD Y+ RGQ+  L  Q EEA+ + D+ I L P   +A+AQ+ F 
Sbjct: 14  DFNMAADIDPQNADVYHHRGQLKILLDQVEEAVADFDECIRLRPESALAQAQKCFA 69


>gi|449670413|ref|XP_002157451.2| PREDICTED: mitochondrial import receptor subunit TOM70-like [Hydra
           magnipapillata]
          Length = 553

 Score =  187 bits (476), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 123/370 (33%), Positives = 193/370 (52%), Gaps = 18/370 (4%)

Query: 6   GAQHAKEEISKRSFFKPSKQFIKTYLKSFPNDPILQPDGLSNGVELTNGDTNESHELDLL 65
           G + A +    R    PS  F+K+YL SF +D           VE+      +  E    
Sbjct: 192 GKELAAKHFESRPRVLPSSFFVKSYLDSFNSDIFY--------VEIPE----DIQEFTSY 239

Query: 66  SKAKRAFEHEDYLTAIRHCTEEIESTSSNHTKALARLLRATVYIFTSQSTKAIEDLTQLV 125
            K   A + ++Y   +  CTEEIE       +A   LLR T+Y        A+ DL +++
Sbjct: 240 HKIIEAMKKKEYTKIVEKCTEEIEKDGKYKNRAY--LLRGTMYTLMCNIPNALADLNKVI 297

Query: 126 EDTSVDPKI--KVNAHIKRAVVHLHAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCL 183
           E    +     K+NA IKR  + +  A D ++ + D D A K+    A+ ++ RGQ+Y L
Sbjct: 298 ELEENETNNELKINALIKRGSLKMQEAKD-SECYDDFDLALKISNKNANIFHHRGQLYFL 356

Query: 184 FGQYEEALRNLDKTIALNPNFHVARAQRHFVVHKMIVPGDRERV-EQSLKEFRNFVDTHS 242
             + +EA +  +  I+L+P F   R Q  + V K+ +      +  ++ K          
Sbjct: 357 TERLDEAKKEFETAISLDPKFVAPRLQLGYCVCKLAMQAMSMSMMNEANKILEETTKLFP 416

Query: 243 NVVEACTLFAQVLVDQEDFDGAEEYFNRSIRVDPENASLYVHRAMLMLQARGNVDEAIKL 302
              EA +L+ Q+L DQ+  D A E   ++I + P+N + Y+++ +LMLQ + +VDEA +L
Sbjct: 417 QCAEAWSLYGQLLQDQQRLDEALEKLEKAISIAPDNPTTYIYKGLLMLQWKQDVDEANRL 476

Query: 303 IEKAISIDKSCMFAYETLGTIEVQRGRLEEAVKCFNKALPLARDEAELSHIYSLRDAAIA 362
           I KAI ID  C FAYETL T+EVQ+G  EEAV+ F +A+ L R E+E+++ +SL +AA A
Sbjct: 477 IRKAIEIDDKCDFAYETLATLEVQKGNNEEAVRLFERAITLVRSESEMANTFSLLEAAKA 536

Query: 363 QMKVCERYNI 372
           Q KV + Y +
Sbjct: 537 QAKVTKEYGV 546


>gi|391336778|ref|XP_003742755.1| PREDICTED: mitochondrial import receptor subunit TOM70-like
           [Metaseiulus occidentalis]
          Length = 565

 Score =  180 bits (456), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 119/356 (33%), Positives = 187/356 (52%), Gaps = 13/356 (3%)

Query: 6   GAQHAKEEISKRSFFKPSKQFIKTYLKSFPNDPILQPDGLSNGVELTNGDTNESHELDLL 65
            +Q AKE  S R    P+  FI+ +LKSF  DP++  D  +      +  +      DL 
Sbjct: 204 ASQRAKEIFSTRKPDLPASSFIRNFLKSFCEDPVIH-DLEAKRRNEPSAASGPPSGYDL- 261

Query: 66  SKAKRAFEHEDYLTAIRHCTEEIESTSSNHTKALARLLRATVYIFTSQSTKAIEDLTQLV 125
             A +    E +     HCTEEI           A LLRA + + + +   A  D+  L+
Sbjct: 262 --ALQDLLEEKWDQVEGHCTEEIRQEHDKEKLEKALLLRAGLCVLSGRIDDAERDVDTLL 319

Query: 126 EDTSVDPKIKVNAHIKRAVVHLHAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFG 185
              +V+ K++VNA IK+A   +H    + +A A  ++A  +DPN AD Y  RGQIY L  
Sbjct: 320 SRENVNVKVRVNALIKKATAEVHR-EQYEQALATFEKAVGLDPNNADIYLHRGQIYLLLD 378

Query: 186 QYEEALRNLDKTIALNPNFHVARAQRHFVVHKMIVPGDRERVEQSLKE----FRNFVDTH 241
           Q ++ LRNL+ + +L P+F  A AQ  +  +     G R    Q+ KE    F+  ++  
Sbjct: 379 QVDQTLRNLELSASLRPDFVSANAQLAYSKYNF---GKRFNDAQAEKEARAMFKTCMEKF 435

Query: 242 SNVVEACTLFAQVLVDQEDFDGAEEYFNRSIRVDPENASLYVHRAMLMLQARGNVDEAIK 301
            N  E   L+AQ+  +Q+    AE+YF + I ++P +A  +VH  ++ +Q+ G  D+ ++
Sbjct: 436 PNAAEVYFLYAQLFNEQQQLGEAEKYFKKFIELEPRDALGWVHLGIVTVQS-GQRDKGVE 494

Query: 302 LIEKAISIDKSCMFAYETLGTIEVQRGRLEEAVKCFNKALPLARDEAELSHIYSLR 357
           ++ KAI I+  C FAYETL T  +Q  R EEAVK   K + LA+ E E++H+ +L+
Sbjct: 495 MMMKAIEIEPKCQFAYETLSTFLMQIERSEEAVKMIEKGIELAQSEGEIAHLIALK 550



 Score = 55.1 bits (131), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 26/58 (44%), Positives = 37/58 (63%)

Query: 465 FTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQ 522
           + +A A  ++A  +DPN AD Y  RGQIY L  Q ++ LRNL+ + +L P+F  A AQ
Sbjct: 346 YEQALATFEKAVGLDPNNADIYLHRGQIYLLLDQVDQTLRNLELSASLRPDFVSANAQ 403


>gi|198471340|ref|XP_002133717.1| GA23045 [Drosophila pseudoobscura pseudoobscura]
 gi|198145874|gb|EDY72344.1| GA23045 [Drosophila pseudoobscura pseudoobscura]
          Length = 554

 Score =  175 bits (443), Expect = 6e-41,   Method: Compositional matrix adjust.
 Identities = 128/385 (33%), Positives = 205/385 (53%), Gaps = 24/385 (6%)

Query: 1   MFMDR-----GAQHAKEEISKRSFFKPSKQFIKTYLKSFPNDPILQPDGLS--NGVELTN 53
           +F DR     G   A EE++ R+   PS     +Y+  F  DP LQ   L   + V+  N
Sbjct: 170 VFADRILQLTGRADAVEELASRAPLVPSLFCFNSYMLPFFADP-LQTTNLPARSLVKTPN 228

Query: 54  GDTNESHELDLLSKAKRAFEHEDYLTAIRHCTEEIESTSSNHTKALARLLRATVYIFTSQ 113
                        +A RA     +   I  CTEEIES  S + +  A L+R T Y+ ++ 
Sbjct: 229 A----------FMRAHRALRARHFKEIIPACTEEIESPDSGY-RFDALLMRGTFYLLSNA 277

Query: 114 STKAIEDLTQLVEDTSVDPKIKVNAHIKRAVVHLHAASDFTKAFADLDEAEKVDPNVADS 173
             ++  D   +V + + D  +   A+++RA V+ +  +D   A AD D AEK+ P+  D 
Sbjct: 278 FKESKHDFGAIVNNPNADTTLSAYAYMRRATVNYYM-NDKAAAVADFDAAEKMQPSNPDV 336

Query: 174 YYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQRHFVVHKM-IVPG--DRERVEQS 230
           Y+QR  +  L     EAL    K++   P   VA    H+  ++  I+ G    +R+E  
Sbjct: 337 YFQRA-LTLLPLDPAEALTQFKKSVTKAPRHAVAVINMHYADYRASIISGALSEKRMEGV 395

Query: 231 LKEFRNFVDTHSNVVEACTLFAQVLVDQEDFDGAEEYFNRSIRVDPENASLYVHRAMLML 290
           ++ F   +      VE   L AQ+LVD++DF  A+EYF +++ ++P N+S+ V  A++++
Sbjct: 396 MRNFEETIMEFPKCVECYNLMAQMLVDRQDFPKAQEYFEKALELEPSNSSVLVQHALMVM 455

Query: 291 QARGNVDEAIKLIEKAISIDKSCMFAYETLGTIEVQRGRLEEAVKCFNKALPLARDEAEL 350
           Q RG+ + A K++ KAI+ D  C  AYETLGTIEVQR  L+EAV+ F++A+   +   +L
Sbjct: 456 QWRGDKEMASKMLNKAIADDPHCQLAYETLGTIEVQRAHLKEAVELFDQAISCCKSYDDL 515

Query: 351 SHIYSLRDAAIAQMKVCERYNIKKK 375
           +H ++LR+A+ AQ+ V E+  I  K
Sbjct: 516 THAFALRNASQAQINVTEKLGIDIK 540


>gi|260836945|ref|XP_002613466.1| hypothetical protein BRAFLDRAFT_119859 [Branchiostoma floridae]
 gi|229298851|gb|EEN69475.1| hypothetical protein BRAFLDRAFT_119859 [Branchiostoma floridae]
          Length = 516

 Score =  174 bits (442), Expect = 9e-41,   Method: Compositional matrix adjust.
 Identities = 114/375 (30%), Positives = 192/375 (51%), Gaps = 57/375 (15%)

Query: 1   MFMDRGAQHAKEEISKRSFFKPSKQFIKTYLKSFPNDPILQP-DGLSNGVELTNGDTNES 59
           +  D G + AKE+   R    PS  FIK Y  SF  D I QP D ++N         +E 
Sbjct: 192 ILKDMGWEKAKEKYKNREPVLPSTHFIKAYFSSFTEDIISQPLDKMAN---------DED 242

Query: 60  HELDLLSKAKRAFEHEDYLTAIRHCTEEIESTSSNHTKALARLLRATVYIFTSQSTKAIE 119
            + +  +         DYL A R+  EE      N+ K +             + +K I+
Sbjct: 243 KDQEGEAVEAEEAPPGDYLKAKRYFQEE------NYDKIIG------------ECSKEID 284

Query: 120 DLTQLVEDTSVDPKIKVNAHIKRAVVHLHAASDFTKAFADLDEAEKVDPNVADSYYQRGQ 179
              + +           +A + RA  H+            + +A    P++        +
Sbjct: 285 SQGEYL----------AHALLMRATFHML-----------MGQAPLARPDLDMLNLLLDR 323

Query: 180 IYCLFGQYEEALRNLDKTIALNPNFHVARAQRHFVVHKM-IVPGDRERVEQSLKEFRNFV 238
           +        EALR+ +K  +L P+F +A  Q ++  ++  ++     +V+ ++K+F   +
Sbjct: 324 V-------PEALRDFEKCCSLKPDFALATVQYNYTQYRAAMLQRSAMQVQDAMKQFEESI 376

Query: 239 DTHSNVVEACTLFAQVLVDQEDFDGAEEYFNRSIRVDPENASLYVHRAMLMLQARGNVDE 298
               +  E   L+AQ L DQ+ FD A++ + ++I ++P+NA+ YVHR +L LQ + ++D 
Sbjct: 377 SKFPDCAEGYVLYAQALGDQQMFDKADDNYKKAISLEPQNATTYVHRGLLHLQWKQDIDA 436

Query: 299 AIKLIEKAISIDKSCMFAYETLGTIEVQRGRLEEAVKCFNKALPLARDEAELSHIYSLRD 358
            + LI+KA+ ID  C FAYET+GTIEVQRG LE+A++ FNKA+ +A+ E E++H+YSL D
Sbjct: 437 GLSLIQKALDIDDRCDFAYETMGTIEVQRGNLEKAIELFNKAISIAKTEMEIAHLYSLCD 496

Query: 359 AAIAQMKVCERYNIK 373
           AA+AQ +V ++Y ++
Sbjct: 497 AAVAQSEVAKKYGLR 511


>gi|256072451|ref|XP_002572549.1| heat shock protein 70 [Schistosoma mansoni]
 gi|353233600|emb|CCD80954.1| putative heat shock protein 70 (hsp70)-interacting protein
           [Schistosoma mansoni]
          Length = 700

 Score =  168 bits (426), Expect = 6e-39,   Method: Compositional matrix adjust.
 Identities = 92/273 (33%), Positives = 150/273 (54%), Gaps = 2/273 (0%)

Query: 102 LLRATVYIFTSQSTKAIEDLTQL-VEDTSVDPKIKVNAHIKRAVVHLHAASDFTKAFADL 160
           LL AT      +S +A E    + + D+     ++VNA IK A + +    D      D 
Sbjct: 404 LLHATYQALAGRSEEAKERFQNIGMVDSGASLVVRVNALIKSACLSMSVDQDVAACLYDF 463

Query: 161 DEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQRHFVVHKM-I 219
             A+ V P   D Y  RGQI  L  Q +EAL +L+  + L P F VA+AQR + +++  +
Sbjct: 464 QRAQNVWPECPDVYLHRGQINLLADQLDEALHDLNTAVKLKPEFSVAQAQRLYTLYRCAL 523

Query: 220 VPGDRERVEQSLKEFRNFVDTHSNVVEACTLFAQVLVDQEDFDGAEEYFNRSIRVDPENA 279
             GD  +V+  ++EFR  V  + N +E  +LFAQ+L ++ DF  +++ F   I + P++ 
Sbjct: 524 TAGDISKVDSRIEEFRRLVKKYPNCLETHSLFAQILSERGDFKESDKIFADLITLAPDSG 583

Query: 280 SLYVHRAMLMLQARGNVDEAIKLIEKAISIDKSCMFAYETLGTIEVQRGRLEEAVKCFNK 339
             Y HR +L L+ + + D A+    + I  D  C   +E LG + V++G+  EA+K F+ 
Sbjct: 584 LAYAHRGLLQLKWKQDRDAALCFFIEGIQKDPKCELIHELLGQLSVEKGQFNEALKHFDM 643

Query: 340 ALPLARDEAELSHIYSLRDAAIAQMKVCERYNI 372
           A+  A+ + +LSH+ +LR+   AQ+KVCE+Y I
Sbjct: 644 AIKQAKTQNDLSHLIALREGVNAQLKVCEQYKI 676



 Score = 50.4 bits (119), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 25/63 (39%), Positives = 32/63 (50%)

Query: 464 DFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQR 523
           D      D   A+ V P   D Y  RGQI  L  Q +EAL +L+  + L P F VA+AQR
Sbjct: 455 DVAACLYDFQRAQNVWPECPDVYLHRGQINLLADQLDEALHDLNTAVKLKPEFSVAQAQR 514

Query: 524 HFV 526
            + 
Sbjct: 515 LYT 517


>gi|332020413|gb|EGI60833.1| Alpha-1,3-mannosyl-glycoprotein
           4-beta-N-acetylglucosaminyltransferase B [Acromyrmex
           echinatior]
          Length = 1048

 Score =  165 bits (417), Expect = 6e-38,   Method: Compositional matrix adjust.
 Identities = 107/369 (28%), Positives = 188/369 (50%), Gaps = 23/369 (6%)

Query: 8   QHAKEEISKRSFFKPSKQFIKTYLKSFPNDPILQPDGLSNGVELTNGDTNESHELDLLSK 67
           QHA E  + +  F P+K  I+ Y+ S+  DP+         +             +   K
Sbjct: 112 QHAYENWASKKLFMPNKPSIECYITSYSTDPVFSKLRCPENIP------------EFFKK 159

Query: 68  AKRAFEHEDYLTAIRHCTEEIESTSSNH---TKALARLLRATVYIFTSQSTKAIEDLTQL 124
             +A +   Y   I  CTE IES   N    TK    LLRAT Y    +   A +DL  +
Sbjct: 160 PLQALKDTKYDDVIPLCTEIIESPEFNSLPSTKLEVLLLRATFYTLLGKYEPAFKDLECI 219

Query: 125 VEDTSVDPKIKVNAHIKRAVVHLHAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLF 184
           +        +K+NA +K A +HL    +   AF + + A  ++P+ +D YY+RG++Y   
Sbjct: 220 LNIEYAPDDVKINALLKTADIHLEFM-NLDMAFMNFELAISINPHYSDIYYRRGRVYMHM 278

Query: 185 GQYEEALRNLDKTIALNPNFHVARAQRHFVVHKM-IVPGDRERVEQSLKEFRNFVDTHSN 243
           G+  +A  + +K +  +PNF +A  Q+ +  + + ++  D   VE +++ F   ++ ++N
Sbjct: 279 GELNKAKYDFEKALEYDPNFSMACIQKCYTDYCIAMLNKDVRLVEAAVRAFEKVLEKYTN 338

Query: 244 VVEA--CTLFAQVLVDQ-EDFDGAEEYFNRSIRVDPENASL---YVHRAMLMLQARGNVD 297
           + E   C  + + ++ + + +  A  YF + I+   ++ S+   Y+ RA L        D
Sbjct: 339 LPECICCYQYYRTMMSETQQYQKAHNYFIKIIKKHSDDTSMSLVYLQRAFLQFDWNDYSD 398

Query: 298 EAIKLIEKAISIDKSCMFAYETLGTIEVQRGRLEEAVKCFNKALPLARDEAELSHIYSLR 357
           +A++ ++KAI +D+ C  AYE LG +E++RG +EEA++ F+KAL   R   EL ++Y LR
Sbjct: 399 KAVEYLKKAIELDEKCRSAYEALGFVEIKRGNIEEAIRLFDKALVYCRTFKELLNLYYLR 458

Query: 358 DAAIAQMKV 366
           DAA  ++ V
Sbjct: 459 DAAKVELNV 467



 Score = 44.3 bits (103), Expect = 0.16,   Method: Compositional matrix adjust.
 Identities = 18/58 (31%), Positives = 36/58 (62%)

Query: 468 AFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQRHF 525
           AF + + A  ++P+ +D YY+RG++Y   G+  +A  + +K +  +PNF +A  Q+ +
Sbjct: 250 AFMNFELAISINPHYSDIYYRRGRVYMHMGELNKAKYDFEKALEYDPNFSMACIQKCY 307


>gi|56755980|gb|AAW26168.1| SJCHGC02873 protein [Schistosoma japonicum]
          Length = 708

 Score =  161 bits (407), Expect = 9e-37,   Method: Compositional matrix adjust.
 Identities = 89/275 (32%), Positives = 147/275 (53%), Gaps = 2/275 (0%)

Query: 100 ARLLRATVYIFTSQSTKAIEDLTQL-VEDTSVDPKIKVNAHIKRAVVHLHAASDFTKAFA 158
           A LL AT      +S +A E    +   D+     ++VNA IK A + +    D      
Sbjct: 410 ASLLHATYQALAGRSEEAKERFQNIGAPDSGASLVVRVNALIKSACLSMSVDQDVASCLY 469

Query: 159 DLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQRHFVVHKM 218
           D   A+       D Y  RGQI  L  Q +EAL +L+  + L P F VA+AQR + +++ 
Sbjct: 470 DFQRAQSAWSECPDIYLHRGQINLLADQLDEALHDLNTAVKLKPEFSVAQAQRLYTLYRC 529

Query: 219 -IVPGDRERVEQSLKEFRNFVDTHSNVVEACTLFAQVLVDQEDFDGAEEYFNRSIRVDPE 277
            +  GD  +V+  ++EFR  V  + N +E  +LFAQ+L ++ DF  +++ F   I + P+
Sbjct: 530 ALTSGDISKVDSRIEEFRRLVKKYPNCLETYSLFAQILSERGDFQESDKIFADLINLSPD 589

Query: 278 NASLYVHRAMLMLQARGNVDEAIKLIEKAISIDKSCMFAYETLGTIEVQRGRLEEAVKCF 337
           +   Y HR +L L+ + + D A+    + I  D  C   +E LG + V++G+  +A+K F
Sbjct: 590 SGLAYAHRGLLQLKWKQDRDAALSYFIEGIKKDPKCELIHELLGQLSVEKGQFIDALKHF 649

Query: 338 NKALPLARDEAELSHIYSLRDAAIAQMKVCERYNI 372
           N A+  A+ + +L+H+ +LR+   AQ+ VCE+Y I
Sbjct: 650 NLAIKQAKTQNDLAHLIALREGVNAQLIVCEKYKI 684



 Score = 45.4 bits (106), Expect = 0.084,   Method: Compositional matrix adjust.
 Identities = 23/63 (36%), Positives = 30/63 (47%)

Query: 464 DFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQR 523
           D      D   A+       D Y  RGQI  L  Q +EAL +L+  + L P F VA+AQR
Sbjct: 463 DVASCLYDFQRAQSAWSECPDIYLHRGQINLLADQLDEALHDLNTAVKLKPEFSVAQAQR 522

Query: 524 HFV 526
            + 
Sbjct: 523 LYT 525


>gi|195168576|ref|XP_002025107.1| GL26762 [Drosophila persimilis]
 gi|194108552|gb|EDW30595.1| GL26762 [Drosophila persimilis]
          Length = 534

 Score =  160 bits (404), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 120/383 (31%), Positives = 203/383 (53%), Gaps = 40/383 (10%)

Query: 1   MFMDR-----GAQHAKEEISKRSFFKPSKQFIKTYLKSFPNDPILQPDGLSNGVELTNGD 55
           +F DR     G   A EE++ R+   PS     +Y++ F  DP+          +  N  
Sbjct: 170 VFADRILQLTGRADAVEELASRAPIVPSLFCFDSYMRPFFADPL----------QTINVP 219

Query: 56  TNESHELDLLSKAKRAFEHEDYLTAIRHCTEEIESTSSNHTKALARLLRATVYIFTSQST 115
                    L K   AFE              IES  S+  +  A L+R T Y+ ++   
Sbjct: 220 PRS------LVKTPNAFE--------------IESPESSGYRLEALLMRGTFYLLSNAFK 259

Query: 116 KAIEDLTQLVEDTSVDPKIKVNAHIKRAVVHLHAASDFTKAFADLDEAEKVDPNVADSYY 175
           ++  D   ++++ +    +   A+++RA V+ +  +D   A AD D AEK+ P+  D Y+
Sbjct: 260 ESKHDFGAIIDNPNAGATLCAYAYMRRATVNYYM-NDKAAAVADFDAAEKIQPSNPDVYF 318

Query: 176 QRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQRHFVVHKM-IVPG--DRERVEQSLK 232
           QR  +  L     EAL  L KT+AL P   VA    ++  ++  I+ G   ++R+E  ++
Sbjct: 319 QRA-LTQLPLDPAEALTQLKKTVALAPRHAVAVINMYYADYRASIIAGALSKKRMEVVMR 377

Query: 233 EFRNFVDTHSNVVEACTLFAQVLVDQEDFDGAEEYFNRSIRVDPENASLYVHRAMLMLQA 292
            F   +    + VE   L AQ+LVD++DF  A+EYF +++ ++P N+S+ V  A+++LQ 
Sbjct: 378 SFEETIMEFPHCVECYNLMAQMLVDRQDFPKAQEYFVKALELEPSNSSVIVQHALMVLQW 437

Query: 293 RGNVDEAIKLIEKAISIDKSCMFAYETLGTIEVQRGRLEEAVKCFNKALPLARDEAELSH 352
           RG+ + A +++++AI+ +  C  AYETLGTIEVQR  L+EAV+ F++A+   +   +L+H
Sbjct: 438 RGDKEMASEMLKQAIAANPHCQQAYETLGTIEVQRAHLKEAVELFDQAIRCCKSYDDLTH 497

Query: 353 IYSLRDAAIAQMKVCERYNIKKK 375
            ++LR+A+ AQ+ V E+  I  K
Sbjct: 498 AFALRNASQAQINVTEKLGIDIK 520


>gi|332020414|gb|EGI60834.1| Mitochondrial import receptor subunit TOM70 [Acromyrmex echinatior]
          Length = 584

 Score =  159 bits (402), Expect = 4e-36,   Method: Compositional matrix adjust.
 Identities = 105/369 (28%), Positives = 184/369 (49%), Gaps = 23/369 (6%)

Query: 8   QHAKEEISKRSFFKPSKQFIKTYLKSFPNDPILQPDGLSNGVELTNGDTNESHELDLLSK 67
           QHA E  + +  F P+K  I+ Y+ S+  DP+         +             +   K
Sbjct: 221 QHAYENWASKKLFMPNKPSIECYITSYSTDPVFSKLRCPENIP------------EFFKK 268

Query: 68  AKRAFEHEDYLTAIRHCTEEIESTSSNH---TKALARLLRATVYIFTSQSTKAIEDLTQL 124
             +A +   Y   I  CTE IES   N    TK    LLRAT Y    +   A +DL  +
Sbjct: 269 PLQALKDTKYDDVIPLCTEIIESPEFNSLPSTKLEVLLLRATFYTLLGKYEPAFKDLECI 328

Query: 125 VEDTSVDPKIKVNAHIKRAVVHLHAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLF 184
           +        +K+NA +K A +HL    +   AF + + A  ++P+ +D YY+RG++Y   
Sbjct: 329 LNIEYAPDDVKINALLKTADIHLEFM-NLDMAFMNFELAISINPHYSDIYYRRGRVYMHM 387

Query: 185 GQYEEALRNLDKTIALNPNFHVARAQRHFVVHKM-IVPGDRERVEQSLKEFRNFVDTHSN 243
           G+  +A  + +K +  +PNF +A  Q+ +  + + ++  D   VE +++ F   ++ ++N
Sbjct: 388 GELNKAKYDFEKALEYDPNFSMACIQKCYTDYCIAMLNKDVRLVEAAVRAFEKVLEKYTN 447

Query: 244 VVEA--CTLFAQVLVDQ-EDFDGAEEYFNRSIRVDPENASL---YVHRAMLMLQARGNVD 297
           + E   C  + + ++ + + +  A  YF + I+   ++ S+   Y+ RA L        D
Sbjct: 448 LPECICCYQYYRTMMSETQQYQKAHNYFIKIIKKHSDDTSMSLVYLQRAFLQFDWNDYSD 507

Query: 298 EAIKLIEKAISIDKSCMFAYETLGTIEVQRGRLEEAVKCFNKALPLARDEAELSHIYSLR 357
           +A++ ++KAI +D+ C  AYE LG +E++RG +EEA++ F+K L   R   EL  +Y  R
Sbjct: 508 KAVEYLKKAIELDEKCRSAYEALGFVEIKRGNIEEAIRLFDKVLVYCRTLKELLSLYYSR 567

Query: 358 DAAIAQMKV 366
           DAA   + V
Sbjct: 568 DAAKVILNV 576



 Score = 44.3 bits (103), Expect = 0.18,   Method: Compositional matrix adjust.
 Identities = 18/58 (31%), Positives = 36/58 (62%)

Query: 468 AFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQRHF 525
           AF + + A  ++P+ +D YY+RG++Y   G+  +A  + +K +  +PNF +A  Q+ +
Sbjct: 359 AFMNFELAISINPHYSDIYYRRGRVYMHMGELNKAKYDFEKALEYDPNFSMACIQKCY 416


>gi|358336465|dbj|GAA31333.2| mitochondrial import receptor subunit TOM70 [Clonorchis sinensis]
          Length = 634

 Score =  156 bits (394), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 85/273 (31%), Positives = 141/273 (51%), Gaps = 2/273 (0%)

Query: 102 LLRATVYIFTSQSTKAIEDLTQL-VEDTSVDPKIKVNAHIKRAVVHLHAASDFTKAFADL 160
           LL AT    + ++ +A +    +  E +  D  ++VNA IK A + +    D      D 
Sbjct: 340 LLHATYLALSGRAAEAKQQFQSVFAEGSGADTVVRVNALIKSACLSMSVDQDLAACLYDF 399

Query: 161 DEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQRHFVVH-KMI 219
             A+   P   D Y  RGQI  L  Q +EAL +L+  + L P F +A+AQR + ++ K +
Sbjct: 400 QTAQSACPECPDVYLHRGQINLLADQLDEALHDLNTAVKLKPEFSIAQAQRLYTLYRKAL 459

Query: 220 VPGDRERVEQSLKEFRNFVDTHSNVVEACTLFAQVLVDQEDFDGAEEYFNRSIRVDPENA 279
              + ER    ++EFR     + N +E  +LFAQVL ++ +F  ++E F + I + P++ 
Sbjct: 460 SDSNSERALSRVQEFRRLSQKYPNCLETHSLFAQVLTERGEFSASDEEFAKVIELAPDSG 519

Query: 280 SLYVHRAMLMLQARGNVDEAIKLIEKAISIDKSCMFAYETLGTIEVQRGRLEEAVKCFNK 339
             Y HR +L L+   + D A K        D  C   +E LG + V++G  + A+  FN 
Sbjct: 520 LAYAHRGLLQLRWNQDRDAAYKWFSMGAKADPKCELIHELLGQLAVEQGEFQTALDHFNM 579

Query: 340 ALPLARDEAELSHIYSLRDAAIAQMKVCERYNI 372
           A+  A+ + +L+H+ +LR+   AQ  VC++Y I
Sbjct: 580 AIREAKTQNDLAHLIALREGVSAQNSVCQKYGI 612



 Score = 48.5 bits (114), Expect = 0.008,   Method: Compositional matrix adjust.
 Identities = 23/63 (36%), Positives = 31/63 (49%)

Query: 464 DFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQR 523
           D      D   A+   P   D Y  RGQI  L  Q +EAL +L+  + L P F +A+AQR
Sbjct: 391 DLAACLYDFQTAQSACPECPDVYLHRGQINLLADQLDEALHDLNTAVKLKPEFSIAQAQR 450

Query: 524 HFV 526
            + 
Sbjct: 451 LYT 453


>gi|332026753|gb|EGI66862.1| Mitochondrial import receptor subunit TOM70 [Acromyrmex echinatior]
          Length = 494

 Score =  155 bits (392), Expect = 5e-35,   Method: Compositional matrix adjust.
 Identities = 95/310 (30%), Positives = 171/310 (55%), Gaps = 9/310 (2%)

Query: 64  LLSKAKRAFEHEDYLTAIRHCTEEIEST---SSNHTKALARLLRATVYIFTSQSTKAIED 120
              K  +A + ++Y   I  CTE I+S    + + TK    LLRAT Y+     + AI+D
Sbjct: 155 FFKKPLKALKDKEYDDIIPLCTEIIKSPEFDTLSSTKLEVLLLRATFYVLLGDYSAAIQD 214

Query: 121 LTQLVEDTSVDPKIKVNAHIKRAVVHLHAASDFTKAFADLDEAEKVDPNVADSYYQRGQI 180
              L+ +  V   +++NA IKRA +++    D   +F D + A  ++   +D YY RG+ 
Sbjct: 215 FENLLNNEDVSDDLRINALIKRAELYMRL-KDSEMSFKDFELAISINSTCSDIYYHRGRA 273

Query: 181 YCLFGQYEEALRNLDKTIALNPNFHVARAQRHFVVHKMIVPGDRER-VEQSLKEFRNFVD 239
                +  EA    +K I  NPNF  A  Q++++ + + +  D  R +  ++K F     
Sbjct: 274 LVFMDKENEAKLEFEKAIKYNPNFSNAYIQKYYLDYSIAISNDNTRLIRAAIKTFEKTFV 333

Query: 240 THSNVVE---ACTLFAQVLVDQEDFDGAEEYFNRSIRVDPENASLYVHRAMLMLQARGNV 296
            + N+ E    C ++A+++ + + +  A+ Y  +++  +P+ AS+Y +R++L L+   N+
Sbjct: 334 KYPNLPEHTMCCIMYAEMMTEIKQYQKADSYLIKAMEKNPKCASVYANRSLLYLRI-DNI 392

Query: 297 DEAIKLIEKAISIDKSCMFAYETLGTIEVQRGRLEEAVKCFNKALPLARDEAELSHIYSL 356
           D+A++ I KAI ID+    AY TLGT EV+RG +EEA++ F+K++  ++   E   IY+L
Sbjct: 393 DKAVEYINKAIEIDEKFGRAYGTLGTFEVKRGNIEEAIRLFDKSVIYSKIFKEQLEIYNL 452

Query: 357 RDAAIAQMKV 366
           R+AA  ++ +
Sbjct: 453 REAAKIELYI 462



 Score = 39.3 bits (90), Expect = 5.2,   Method: Compositional matrix adjust.
 Identities = 28/119 (23%), Positives = 51/119 (42%), Gaps = 12/119 (10%)

Query: 420 TQKMTSILNSNDYEIIPGDPTKTIEESEKYGNLENESGQKHAASDFTKA----------- 468
           + K+  +L    + ++ GD +  I++ E   N E+ S      +   +A           
Sbjct: 189 STKLEVLLLRATFYVLLGDYSAAIQDFENLLNNEDVSDDLRINALIKRAELYMRLKDSEM 248

Query: 469 -FADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQRHFV 526
            F D + A  ++   +D YY RG+      +  EA    +K I  NPNF  A  Q++++
Sbjct: 249 SFKDFELAISINSTCSDIYYHRGRALVFMDKENEAKLEFEKAIKYNPNFSNAYIQKYYL 307


>gi|401883832|gb|EJT48016.1| ADP/ATP carrier receptor [Trichosporon asahii var. asahii CBS 2479]
          Length = 621

 Score =  153 bits (386), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 111/363 (30%), Positives = 181/363 (49%), Gaps = 28/363 (7%)

Query: 6   GAQHAKEEISKRSFFKPSKQFIKTYLKSFPNDPILQPDGLSNGVELTNGDTNESHELDLL 65
            ++ AK+ ++ R    PS  FI +YL +F + P  +P    N    + GD       D L
Sbjct: 261 ASRRAKDMLATREPKLPSPTFISSYLAAFRDHP--KPSLPENP---SQGDQTLMLAFDAL 315

Query: 66  SKAKRAFEHEDYLTAIRHCTEEIE-STSSNHTKALARLLRATVYIFTSQSTKAIEDLTQL 124
           S A       DY  A+    E IE   S+ H +A A  +R T       S  A EDL + 
Sbjct: 316 SSA-------DYPHAVSFTNEAIEQGISTKHLQAEAYNVRGTFKFLIGDSAGAKEDLEKS 368

Query: 125 VEDTSVDPKIKVNAHIKRAVVHLHAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLF 184
           +E   ++P   V + +K A VH+    D   AF D + A K +PN  D YY RGQ++ + 
Sbjct: 369 LE---LEPTF-VQSWVKIASVHMELG-DAVSAFGDFETAIKHNPNDPDIYYHRGQVFFIM 423

Query: 185 GQYEEALRNLDKTIALNPNFHVARAQRHFVVHKMIVPGDRERVEQSLKEFRNFVDTHSNV 244
           G++++A+ +  K+I L+  F     Q     +KM        V +S+  FR  +    + 
Sbjct: 424 GEHQKAIDDYQKSIDLDDKFIFTHVQAAVAQYKM------GEVAKSMAAFRRILKQFPDR 477

Query: 245 VEACTLFAQVLVDQEDFDGAEEYFNRSIRVD----PENASLYVHRAMLMLQARGNVDEAI 300
            E    + ++L+DQ+ FD + + F+RSI +D    P N   +V++A+ + Q + ++  A 
Sbjct: 478 GEPSNYYGEILLDQQKFDESVQRFDRSIELDKDRKPRNVLPFVNKALALFQWKQDIQAAE 537

Query: 301 KLIEKAISIDKSCMFAYETLGTIEVQRGRLEEAVKCFNKALPLARDEAELSHIYSLRDAA 360
            L ++A+ ID  C  A  TL  + +Q+G+++EA+K F K+  LAR E EL +  +   A+
Sbjct: 538 SLCKEALEIDPDCDVAVATLAQLSLQQGKIDEAIKWFEKSGKLARTEGELVNAITYEHAS 597

Query: 361 IAQ 363
            AQ
Sbjct: 598 RAQ 600



 Score = 51.2 bits (121), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 81/330 (24%), Positives = 141/330 (42%), Gaps = 60/330 (18%)

Query: 255 LVDQEDFDGAEEYFNRSIRVD-PENASLYVHRAMLMLQ-ARGNVDEAIKLIEKAISIDKS 312
           L  ++DF  A E ++++I V   ++A  Y +RA      +    D  +K  ++A+ +D++
Sbjct: 151 LYAKKDFKKAVECYSKAIEVSVKKDAVFYSNRAACYTNYSPPEYDLCVKDCDEALKLDRT 210

Query: 313 CMFAYETLGTIEVQRGRLEEAVKCFNKALPLARDEAELSHIYSLRDAAIAQMKVCERYNI 372
            + A +   T   +  R EEAV+ F     + R + E         AA A ++ C    +
Sbjct: 211 YVKALKRRATALERLDRDEEAVRDFTACTIIERFQDE---------AAAAAVERC----L 257

Query: 373 KKKVSPRSQNI--TKNEKLAIKQLRENNDIIIR----PA-----DKGGKTVVM-----DK 416
           KK  S R++++  T+  KL       +     R    P+      +G +T+++       
Sbjct: 258 KKLASRRAKDMLATREPKLPSPTFISSYLAAFRDHPKPSLPENPSQGDQTLMLAFDALSS 317

Query: 417 ADYTQKM------------TSILNSNDYEI------IPGDPTKTIEESEKYGNLEN---E 455
           ADY   +            T  L +  Y +      + GD     E+ EK   LE    +
Sbjct: 318 ADYPHAVSFTNEAIEQGISTKHLQAEAYNVRGTFKFLIGDSAGAKEDLEKSLELEPTFVQ 377

Query: 456 SGQKHAA-----SDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTI 510
           S  K A+      D   AF D + A K +PN  D YY RGQ++ + G++++A+ +  K+I
Sbjct: 378 SWVKIASVHMELGDAVSAFGDFETAIKHNPNDPDIYYHRGQVFFIMGEHQKAIDDYQKSI 437

Query: 511 ALNPNF---HVARAQRHFVWTSTLAELMAF 537
            L+  F   HV  A   +        + AF
Sbjct: 438 DLDDKFIFTHVQAAVAQYKMGEVAKSMAAF 467


>gi|406696182|gb|EKC99477.1| ADP/ATP carrier receptor [Trichosporon asahii var. asahii CBS 8904]
          Length = 621

 Score =  153 bits (386), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 111/363 (30%), Positives = 181/363 (49%), Gaps = 28/363 (7%)

Query: 6   GAQHAKEEISKRSFFKPSKQFIKTYLKSFPNDPILQPDGLSNGVELTNGDTNESHELDLL 65
            ++ AK+ ++ R    PS  FI +YL +F + P  +P    N    + GD       D L
Sbjct: 261 ASRRAKDMLATREPKLPSPTFISSYLAAFRDHP--KPSLPENP---SQGDQTLMLAFDAL 315

Query: 66  SKAKRAFEHEDYLTAIRHCTEEIE-STSSNHTKALARLLRATVYIFTSQSTKAIEDLTQL 124
           S A       DY  A+    E IE   S+ H +A A  +R T       S  A EDL + 
Sbjct: 316 SSA-------DYPHAVSFTNEAIEQGISTKHLQAEAYNVRGTFKFLIGDSAGAKEDLGKS 368

Query: 125 VEDTSVDPKIKVNAHIKRAVVHLHAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLF 184
           +E   ++P   V + +K A VH+    D   AF D + A K +PN  D YY RGQ++ + 
Sbjct: 369 LE---LEPTF-VQSWVKIASVHMELG-DAVSAFGDFETAIKHNPNDPDIYYHRGQVFFIM 423

Query: 185 GQYEEALRNLDKTIALNPNFHVARAQRHFVVHKMIVPGDRERVEQSLKEFRNFVDTHSNV 244
           G++++A+ +  K+I L+  F     Q     +KM        V +S+  FR  +    + 
Sbjct: 424 GEHQKAIDDYQKSIDLDDKFIFTHVQAAVAQYKM------GEVAKSMAAFRRILKQFPDR 477

Query: 245 VEACTLFAQVLVDQEDFDGAEEYFNRSIRVD----PENASLYVHRAMLMLQARGNVDEAI 300
            E    + ++L+DQ+ FD + + F+RSI +D    P N   +V++A+ + Q + ++  A 
Sbjct: 478 GEPSNYYGEILLDQQKFDESVQRFDRSIELDKDRKPRNVLPFVNKALALFQWKQDIQAAE 537

Query: 301 KLIEKAISIDKSCMFAYETLGTIEVQRGRLEEAVKCFNKALPLARDEAELSHIYSLRDAA 360
            L ++A+ ID  C  A  TL  + +Q+G+++EA+K F K+  LAR E EL +  +   A+
Sbjct: 538 SLCKEALEIDPDCDVAVATLAQLSLQQGKIDEAIKWFEKSGKLARTEGELVNAITYEHAS 597

Query: 361 IAQ 363
            AQ
Sbjct: 598 RAQ 600



 Score = 48.5 bits (114), Expect = 0.008,   Method: Compositional matrix adjust.
 Identities = 80/330 (24%), Positives = 140/330 (42%), Gaps = 60/330 (18%)

Query: 255 LVDQEDFDGAEEYFNRSIRVD-PENASLYVHRAMLMLQ-ARGNVDEAIKLIEKAISIDKS 312
           L  ++DF  A E ++++I V   ++A  Y +RA      +    D  +K  ++A+ +D++
Sbjct: 151 LYAKKDFKKAVECYSKAIEVSVKKDAVFYSNRAACYTNYSPPEYDLCVKDCDEALKLDRT 210

Query: 313 CMFAYETLGTIEVQRGRLEEAVKCFNKALPLARDEAELSHIYSLRDAAIAQMKVCERYNI 372
            + A +   T   +  R EEAV+ F     + R + E         AA A ++ C    +
Sbjct: 211 YVKALKRRATALERLDRDEEAVRDFTACTIIERFQDE---------AAAAAVERC----L 257

Query: 373 KKKVSPRSQNI--TKNEKLAIKQLRENNDIIIR----PA-----DKGGKTVVM-----DK 416
           KK  S R++++  T+  KL       +     R    P+      +G +T+++       
Sbjct: 258 KKLASRRAKDMLATREPKLPSPTFISSYLAAFRDHPKPSLPENPSQGDQTLMLAFDALSS 317

Query: 417 ADYTQKM------------TSILNSNDYEI------IPGDPTKTIEESEKYGNLEN---E 455
           ADY   +            T  L +  Y +      + GD     E+  K   LE    +
Sbjct: 318 ADYPHAVSFTNEAIEQGISTKHLQAEAYNVRGTFKFLIGDSAGAKEDLGKSLELEPTFVQ 377

Query: 456 SGQKHAA-----SDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTI 510
           S  K A+      D   AF D + A K +PN  D YY RGQ++ + G++++A+ +  K+I
Sbjct: 378 SWVKIASVHMELGDAVSAFGDFETAIKHNPNDPDIYYHRGQVFFIMGEHQKAIDDYQKSI 437

Query: 511 ALNPNF---HVARAQRHFVWTSTLAELMAF 537
            L+  F   HV  A   +        + AF
Sbjct: 438 DLDDKFIFTHVQAAVAQYKMGEVAKSMAAF 467


>gi|328909371|gb|AEB61353.1| mitochondrial import receptor subunit TOM70-like protein, partial
           [Equus caballus]
          Length = 319

 Score =  149 bits (376), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 93/289 (32%), Positives = 150/289 (51%), Gaps = 8/289 (2%)

Query: 6   GAQHAKEEISKRSFFKPSKQFIKTYLKSFPNDPILQP---DGLSNGVELTNGDTNESHEL 62
           G + AKE+   R    PS QFIK+Y  SF +D I QP      S+  +   G+  E  E 
Sbjct: 35  GKEKAKEKYKNREPLMPSPQFIKSYFSSFTDDIISQPMLKGEKSDEDKDKEGEALEVKEN 94

Query: 63  DLLSKAKRAFEHEDYLTAIRHCTEEIESTSSNHTKALARLLRATVYIFTSQSTKAIEDLT 122
               KAK+  E E+Y   I  C++E+++      +AL  LLRAT Y+    +T A  DL 
Sbjct: 95  SGYLKAKQYMEEENYDKIISECSKEVDAQGKYMAEAL--LLRATFYLLIGNATAAKPDLD 152

Query: 123 QLVEDTSVDPKIKVNAHIKRAVVHLHAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYC 182
           +++     + K++ NA IKR  +++        +  D + A  +DP  AD Y+ RGQ+  
Sbjct: 153 KVISLKDANVKLRANALIKRGSMYMQQQQPLL-STQDFNMAADIDPQNADVYHHRGQLKI 211

Query: 183 LFGQYEEALRNLDKTIALNPNFHVARAQRHFVVHKMIVPGDR-ERVEQSLKEFRNFVDTH 241
           L  Q EEA+ + D+ I L P   +A+AQ+ F +++    G+   +++ ++K F   +   
Sbjct: 212 LLDQVEEAVADFDECIRLRPESALAQAQKCFALYRQAYTGNNSSQIQAAMKGFEEVIKKF 271

Query: 242 SNVVEACTLFAQVLVDQEDFDGAEEYFNRSIRVDPENASLYVHRAMLML 290
               E   L AQ L DQ+ F  A+E +++ I ++P + S YVH+ +L L
Sbjct: 272 PRCAEGYALCAQALTDQQQFGKADEMYDKCIDLEP-DMSTYVHKGLLQL 319



 Score = 48.5 bits (114), Expect = 0.010,   Method: Compositional matrix adjust.
 Identities = 23/57 (40%), Positives = 33/57 (57%)

Query: 471 DLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQRHFVW 527
           D + A  +DP  AD Y+ RGQ+  L  Q EEA+ + D+ I L P   +A+AQ+ F  
Sbjct: 188 DFNMAADIDPQNADVYHHRGQLKILLDQVEEAVADFDECIRLRPESALAQAQKCFAL 244


>gi|198469691|ref|XP_002134388.1| GA23692 [Drosophila pseudoobscura pseudoobscura]
 gi|198146990|gb|EDY73015.1| GA23692 [Drosophila pseudoobscura pseudoobscura]
          Length = 542

 Score =  149 bits (375), Expect = 5e-33,   Method: Compositional matrix adjust.
 Identities = 100/369 (27%), Positives = 187/369 (50%), Gaps = 9/369 (2%)

Query: 9   HAKEEISKRSFFKPSKQFIKTYLKSFPNDPILQPDGLSNGVELTNGDTNESHELDLLSKA 68
           +AKE++ +     PSK++I++YL +F  DP+L     S+  +    D  E       ++A
Sbjct: 169 NAKEKMIREGTSLPSKRYIRSYLATFIADPMLTMTLPSS--DAAGADAPERG----FARA 222

Query: 69  KRAFEHEDYLTAIRHCTEEIESTSSN-HTKALARLLRATVYIFTSQSTKAIEDLTQLVED 127
            RAF  E +   I  CTEEI+S+++    +  A  LRAT+++ +  + +  +DL  L+ +
Sbjct: 223 HRAFLEERFEDVISACTEEIDSSAAGGQYRMHALFLRATLHLLSGSAQECEQDLQTLLGN 282

Query: 128 TSVDPKIKVNAHIKRAVVHLHAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQY 187
              D ++++ A I+ A +   A  D  +    L +AE + P   D Y QR  +     ++
Sbjct: 283 DETDDELRIYAQIRYATLIFQANQD-GQFLGALSQAEMLGPKNPDIYNQRAMLLSHMERF 341

Query: 188 EEALRNLDKTIALNPNFHVARAQRHFVVHKMIVP-GDRERVEQSLKEFRNFVDTHSNVVE 246
           EEAL + +    L P   +    +H   +++ V  GD+ER+E S++  +       +  E
Sbjct: 342 EEALDDFEIAARLAPTHALTVLNKHLTDYRIAVKEGDQERLEMSVQRLQLTTGRFPDCEE 401

Query: 247 ACTLFAQVLVDQEDFDGAEEYFNRSIRVDPENASLYVHRAMLMLQARGNVDEAIKLIEKA 306
              + +QV  +Q+++  A +   R++++ P NA L  H+A+L  +   +++     +E+A
Sbjct: 402 GLVMLSQVHTEQKNYLQASKCLERAVKLSPTNAELLCHQAVLEFEWHDDIELFFAKLEQA 461

Query: 307 ISIDKSCMFAYETLGTIEVQRGRLEEAVKCFNKALPLARDEAELSHIYSLRDAAIAQMKV 366
           I +D  C   YE LG  E++   L  AV  F  A+  +R   E+ + YSL +A +A++  
Sbjct: 462 ILLDSQCRLIYENLGRAELRLKNLPLAVNYFFWAISHSRGLEEMYNSYSLHNATVAEVTA 521

Query: 367 CERYNIKKK 375
            E   + ++
Sbjct: 522 LENLGMAQE 530


>gi|195164249|ref|XP_002022961.1| GL16436 [Drosophila persimilis]
 gi|194105023|gb|EDW27066.1| GL16436 [Drosophila persimilis]
          Length = 585

 Score =  149 bits (375), Expect = 5e-33,   Method: Compositional matrix adjust.
 Identities = 94/349 (26%), Positives = 176/349 (50%), Gaps = 16/349 (4%)

Query: 27  IKTYLKSFPNDPILQPDGLSNGVELTNGDTNESHELDLLSKAKRAFEHEDYLTAIRHCTE 86
           I ++ +SF  D            E+ NG ++         +A  AF  E +   I  CTE
Sbjct: 232 ILSFTRSFATD------------EMMNGSSDAPPPRGF-HRALSAFHKEQFADVIPSCTE 278

Query: 87  EIESTSSNHTKALARLLRATVYIFTSQSTKAIEDLTQLVEDTSVDPKIKVNAHIKRAVVH 146
           EI+S+ +++ K  A L+R T  +F     +  +D+  +++    + +++++ ++  AV+ 
Sbjct: 279 EIDSSEADY-KMEALLMRGTFQLFRGACEEGKQDVDAVLQKIHANVQLRISTYLWSAVLQ 337

Query: 147 LHAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHV 206
           +       +    L++AEK  PN AD +YQR  + C   ++ EA  +  +   L P    
Sbjct: 338 VLLGKK-EEGLEILEQAEKWHPNNADLFYQRALLLCDMERFHEAFWDFSQASQLAPRNAT 396

Query: 207 ARAQRHFVVHKMIVPGDRE-RVEQSLKEFRNFVDTHSNVVEACTLFAQVLVDQEDFDGAE 265
              Q+HF  +++ V  + +  ++ ++KE +  + +     +  ++ AQV VDQ+DF  A 
Sbjct: 397 TELQKHFTEYRIAVREENQLGIQIAIKELQESIASFPPCADGYSMMAQVRVDQKDFAEAM 456

Query: 266 EYFNRSIRVDPENASLYVHRAMLMLQARGNVDEAIKLIEKAISIDKSCMFAYETLGTIEV 325
           +   ++++++P NA+L V +AML     G++ +   +++ AIS+D  C  A+  LG + +
Sbjct: 457 KCLQKAVKLNPSNATLLVQKAMLEEHWHGDLKKVAMMLKAAISVDPQCYLAHWKLGLVHL 516

Query: 326 QRGRLEEAVKCFNKALPLARDEAELSHIYSLRDAAIAQMKVCERYNIKK 374
               L +AV  F KA  LA+D  EL   Y  R+A +A+M   +R  I K
Sbjct: 517 MLRNLTKAVGNFEKACFLAKDNDELMQSYKFRNATVAKMGAFQRLRIVK 565



 Score = 40.8 bits (94), Expect = 1.8,   Method: Compositional matrix adjust.
 Identities = 19/55 (34%), Positives = 28/55 (50%)

Query: 472 LDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQRHFV 526
           L++AEK  PN AD +YQR  + C   ++ EA  +  +   L P       Q+HF 
Sbjct: 350 LEQAEKWHPNNADLFYQRALLLCDMERFHEAFWDFSQASQLAPRNATTELQKHFT 404


>gi|321253255|ref|XP_003192679.1| ADP/ATP carrier receptor [Cryptococcus gattii WM276]
 gi|317459148|gb|ADV20892.1| Mitochondrial import receptor subunit tom40 (Translocase of outer
           membrane 40 kDa subunit), putative [Cryptococcus gattii
           WM276]
          Length = 622

 Score =  148 bits (373), Expect = 9e-33,   Method: Compositional matrix adjust.
 Identities = 112/371 (30%), Positives = 180/371 (48%), Gaps = 30/371 (8%)

Query: 6   GAQHAKEEISKRSFFKPSKQFIKTYLKSF-PNDPILQPDGLSNGVELTNGDTNESHELDL 64
            +  A E +SKR    PS  FI  YL +F P+     P+  S G +              
Sbjct: 262 ASSRAAEILSKREANLPSPTFISAYLAAFRPHPKPALPESPSQGDQT------------- 308

Query: 65  LSKAKRAFEHEDYLTAIRHCTEEIE-STSSNHTKALARLLRATVYIFTSQSTKAIEDLTQ 123
           LS A  A E  DY  A  +  E IE   SS   +A A  LR T       +  A +DL +
Sbjct: 309 LSLAFDALEAADYPHAFTYAAESIEQGISSKKGQAEAYNLRGTFKFLMGNAEGARDDLQK 368

Query: 124 LVEDTSVDPKIKVNAHIKRAVVHLHAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCL 183
            ++   +DP   V + +K A VH+    D   AF D + A + D +  D YY RGQ+Y +
Sbjct: 369 SLD---IDPGF-VQSWVKIASVHMELG-DPATAFGDFEAAIRHDADNPDIYYHRGQVYFI 423

Query: 184 FGQYEEALRNLDKTIALNPNFHVARAQRHFVVHKMIVPGDRERVEQSLKEFRNFVDTHSN 243
             ++++AL +  K++ L+ +F     Q     +KM        V  S+  FR  +    +
Sbjct: 424 TQEFDKALADYTKSVQLDSSFIFPHIQTAVCQYKM------GNVGSSMASFRRILREFPD 477

Query: 244 VVEACTLFAQVLVDQEDFDGAEEYFNRSIRVD----PENASLYVHRAMLMLQARGNVDEA 299
             EA   + ++L+DQ+ F  + E F+RSI +D    P N   +V++A+ + Q + +++ A
Sbjct: 478 RGEASNYYGEILLDQQKFSESLERFDRSIELDKERKPRNVLPFVNKALALFQWKQDINGA 537

Query: 300 IKLIEKAISIDKSCMFAYETLGTIEVQRGRLEEAVKCFNKALPLARDEAELSHIYSLRDA 359
             L ++A+ ID  C  A  TL  + +Q+G+++EA+K F K+  LAR E EL +  +   A
Sbjct: 538 EALCKEALEIDPDCDVAVATLAQLSLQQGKIDEAIKWFEKSAQLARTEGELVNAITYEHA 597

Query: 360 AIAQMKVCERY 370
           + AQ+   + Y
Sbjct: 598 SKAQVHFLKTY 608



 Score = 39.3 bits (90), Expect = 5.1,   Method: Compositional matrix adjust.
 Identities = 18/54 (33%), Positives = 32/54 (59%)

Query: 463 SDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNF 516
            D   AF D + A + D +  D YY RGQ+Y +  ++++AL +  K++ L+ +F
Sbjct: 391 GDPATAFGDFEAAIRHDADNPDIYYHRGQVYFITQEFDKALADYTKSVQLDSSF 444


>gi|198471750|ref|XP_002133832.1| GA22574 [Drosophila pseudoobscura pseudoobscura]
 gi|198146061|gb|EDY72459.1| GA22574 [Drosophila pseudoobscura pseudoobscura]
          Length = 583

 Score =  147 bits (370), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 94/354 (26%), Positives = 181/354 (51%), Gaps = 17/354 (4%)

Query: 23  SKQF-IKTYLKSFPNDPILQPDGLSNGVELTNGDTNESHELDLLSKAKRAFEHEDYLTAI 81
           +K+F I ++ +SF  D            E+ NG ++         +A  AF  E +   I
Sbjct: 225 AKKFDILSFTRSFATD------------EMMNGSSDAPPPRGF-HRALSAFHKEQFADVI 271

Query: 82  RHCTEEIESTSSNHTKALARLLRATVYIFTSQSTKAIEDLTQLVEDTSVDPKIKVNAHIK 141
             CTEEI+S+ +++ K  A L+R T  +F     +  +D+  +++    + +++++ ++ 
Sbjct: 272 PSCTEEIDSSEADY-KMEALLMRGTFQLFRGACEEGKQDVDAVLQSIHANVQLRISTYLW 330

Query: 142 RAVVHLHAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALN 201
            AV+ +       +    L++AEK  PN AD +YQR  + C   ++ EA  +  +   L 
Sbjct: 331 SAVLQVLLGKK-QEGLEILEQAEKWHPNNADLFYQRALLLCDMERFHEAFWDFSQASQLA 389

Query: 202 PNFHVARAQRHFVVHKMIVPGDRE-RVEQSLKEFRNFVDTHSNVVEACTLFAQVLVDQED 260
           P       Q++F  +++ V  + +  ++ ++K+ +  + +     +  ++ AQV VDQ+D
Sbjct: 390 PLNATTELQKYFTEYRIAVREENQLGIQMAIKDLQESIASFPPCADGYSMMAQVRVDQKD 449

Query: 261 FDGAEEYFNRSIRVDPENASLYVHRAMLMLQARGNVDEAIKLIEKAISIDKSCMFAYETL 320
           F  A +   ++++++P NA+L V +AML     G++ +   +++ AIS+D  C  A+  L
Sbjct: 450 FAEAMKCLQKAVKLNPTNAALLVQKAMLEEHWHGDLKKVAMMLKAAISVDPQCYLAHWKL 509

Query: 321 GTIEVQRGRLEEAVKCFNKALPLARDEAELSHIYSLRDAAIAQMKVCERYNIKK 374
           G + +  G L +AV  F KA  LA+D  EL   Y  R+A +A++   +R  I K
Sbjct: 510 GLVHLMLGNLTKAVGNFEKACFLAKDNDELIQSYKFRNATVAKIGAFQRLRIVK 563


>gi|149060321|gb|EDM11035.1| translocase of outer mitochondrial membrane 70 homolog A (yeast),
           isoform CRA_a [Rattus norvegicus]
          Length = 147

 Score =  145 bits (365), Expect = 8e-32,   Method: Compositional matrix adjust.
 Identities = 66/143 (46%), Positives = 99/143 (69%)

Query: 231 LKEFRNFVDTHSNVVEACTLFAQVLVDQEDFDGAEEYFNRSIRVDPENASLYVHRAMLML 290
           +K F   +       E   L+AQ L DQ+ F  A+E +++ I ++P+NA+ YVH+ +L L
Sbjct: 1   MKGFEEVIKKFPRCAEGYALYAQALTDQQQFGKADEMYDKCIDLEPDNATTYVHKGLLQL 60

Query: 291 QARGNVDEAIKLIEKAISIDKSCMFAYETLGTIEVQRGRLEEAVKCFNKALPLARDEAEL 350
           Q + ++D+ ++LI KAI ID  C FAYET+GTIEVQRG +E+A+  FNKA+ LA+ E E+
Sbjct: 61  QWKQDLDKGLELISKAIEIDNKCDFAYETMGTIEVQRGNMEKAIDMFNKAINLAKSEMEM 120

Query: 351 SHIYSLRDAAIAQMKVCERYNIK 373
           +H+YSL DAA AQ +V ++Y +K
Sbjct: 121 AHLYSLCDAAHAQTEVAKKYGLK 143


>gi|58264572|ref|XP_569442.1| hypothetical protein [Cryptococcus neoformans var. neoformans
           JEC21]
 gi|57225674|gb|AAW42135.1| conserved hypothetical protein [Cryptococcus neoformans var.
           neoformans JEC21]
          Length = 625

 Score =  141 bits (356), Expect = 8e-31,   Method: Compositional matrix adjust.
 Identities = 111/371 (29%), Positives = 181/371 (48%), Gaps = 30/371 (8%)

Query: 6   GAQHAKEEISKRSFFKPSKQFIKTYLKSF-PNDPILQPDGLSNGVELTNGDTNESHELDL 64
            +  A E +SKR    PS  FI  YL +F P+     P+  S G +LT            
Sbjct: 265 ASSRAAEILSKREANLPSPTFISAYLAAFRPHPKPALPENPSQG-DLT------------ 311

Query: 65  LSKAKRAFEHEDYLTAIRHCTEEIE-STSSNHTKALARLLRATVYIFTSQSTKAIEDLTQ 123
           LS A  A E  DY  A+ +  E IE   SS   +A A  LR T       +  A +DL +
Sbjct: 312 LSLAFDALEAADYPHALTYAAESIEQGISSKKGEAEAYNLRGTFKFLMGNAEGARDDLQK 371

Query: 124 LVEDTSVDPKIKVNAHIKRAVVHLHAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCL 183
            ++   +D    V + +K A VH+    D   AF D + A + D +  D YY RGQ+Y +
Sbjct: 372 SLD---IDSGF-VQSWVKIASVHMELG-DPATAFGDFEAAIRHDADNPDIYYHRGQVYFI 426

Query: 184 FGQYEEALRNLDKTIALNPNFHVARAQRHFVVHKMIVPGDRERVEQSLKEFRNFVDTHSN 243
             ++++AL +  K++ L+ +F     Q     +KM        V  S+  FR  +    +
Sbjct: 427 TQEFDKALADYTKSVQLDSSFIFPHIQTAVCQYKM------GNVGSSMASFRRILREFPD 480

Query: 244 VVEACTLFAQVLVDQEDFDGAEEYFNRSIRVD----PENASLYVHRAMLMLQARGNVDEA 299
             EA   + ++L+DQ+ F  + + F++SI +D    P N   +V++A+ + Q + ++  A
Sbjct: 481 RGEASNYYGEILLDQQKFSESLDRFDKSIELDKERKPRNVLPFVNKALALFQWKQDIAGA 540

Query: 300 IKLIEKAISIDKSCMFAYETLGTIEVQRGRLEEAVKCFNKALPLARDEAELSHIYSLRDA 359
             L ++A+ ID  C  A  TL  + +Q+G+++EA+K F K+  LAR E EL +  +   A
Sbjct: 541 EALCKEALEIDPDCDVAVATLAQLSLQQGKIDEAIKWFEKSAQLARTEGELINAITYEHA 600

Query: 360 AIAQMKVCERY 370
           + AQ+   + Y
Sbjct: 601 SKAQVHFLKTY 611



 Score = 39.3 bits (90), Expect = 4.9,   Method: Compositional matrix adjust.
 Identities = 18/54 (33%), Positives = 32/54 (59%)

Query: 463 SDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNF 516
            D   AF D + A + D +  D YY RGQ+Y +  ++++AL +  K++ L+ +F
Sbjct: 394 GDPATAFGDFEAAIRHDADNPDIYYHRGQVYFITQEFDKALADYTKSVQLDSSF 447


>gi|405123121|gb|AFR97886.1| mitochondrial outer membrane 72K protein [Cryptococcus neoformans
           var. grubii H99]
          Length = 625

 Score =  141 bits (355), Expect = 9e-31,   Method: Compositional matrix adjust.
 Identities = 111/371 (29%), Positives = 181/371 (48%), Gaps = 30/371 (8%)

Query: 6   GAQHAKEEISKRSFFKPSKQFIKTYLKSF-PNDPILQPDGLSNGVELTNGDTNESHELDL 64
            +  A E +SKR    PS  FI  YL +F P+     P+  S G +LT            
Sbjct: 265 ASSRAAEILSKREANLPSPTFISAYLAAFRPHPKPALPENPSQG-DLT------------ 311

Query: 65  LSKAKRAFEHEDYLTAIRHCTEEIE-STSSNHTKALARLLRATVYIFTSQSTKAIEDLTQ 123
           LS A  A E  DY  A+ +  E IE   SS   +A A  LR T       +  A +DL +
Sbjct: 312 LSLAFDALEAADYPHALTYAAESIEQGISSKKGEAEAYNLRGTFKFLMGNAEGARDDLQK 371

Query: 124 LVEDTSVDPKIKVNAHIKRAVVHLHAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCL 183
            ++   +D    V + +K A VH+    D   AF D + A + D +  D YY RGQ+Y +
Sbjct: 372 SLD---IDSGF-VQSWVKIASVHMELG-DPATAFGDFEAAIRHDADNPDIYYHRGQVYFI 426

Query: 184 FGQYEEALRNLDKTIALNPNFHVARAQRHFVVHKMIVPGDRERVEQSLKEFRNFVDTHSN 243
             ++++AL +  K++ L+ +F     Q     +KM        V  S+  FR  +    +
Sbjct: 427 TQEFDKALADYTKSVQLDSSFIFPHIQTAVCQYKM------GNVGSSMASFRRILREFPD 480

Query: 244 VVEACTLFAQVLVDQEDFDGAEEYFNRSIRVD----PENASLYVHRAMLMLQARGNVDEA 299
             EA   + ++L+DQ+ F  + + F++SI +D    P N   +V++A+ + Q + ++  A
Sbjct: 481 RGEASNYYGEILLDQQKFSESLDRFDKSIELDKERKPRNVLPFVNKALALFQWKQDIAGA 540

Query: 300 IKLIEKAISIDKSCMFAYETLGTIEVQRGRLEEAVKCFNKALPLARDEAELSHIYSLRDA 359
             L ++A+ ID  C  A  TL  + +Q+G+++EA+K F K+  LAR E EL +  +   A
Sbjct: 541 EALCKEALEIDPDCDVAVATLAQLSLQQGKIDEAIKWFEKSAQLARTEGELINAITYEHA 600

Query: 360 AIAQMKVCERY 370
           + AQ+   + Y
Sbjct: 601 SKAQVHFLKTY 611



 Score = 39.3 bits (90), Expect = 4.9,   Method: Compositional matrix adjust.
 Identities = 18/54 (33%), Positives = 32/54 (59%)

Query: 463 SDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNF 516
            D   AF D + A + D +  D YY RGQ+Y +  ++++AL +  K++ L+ +F
Sbjct: 394 GDPATAFGDFEAAIRHDADNPDIYYHRGQVYFITQEFDKALADYTKSVQLDSSF 447


>gi|134109857|ref|XP_776478.1| hypothetical protein CNBC5320 [Cryptococcus neoformans var.
           neoformans B-3501A]
 gi|50259154|gb|EAL21831.1| hypothetical protein CNBC5320 [Cryptococcus neoformans var.
           neoformans B-3501A]
          Length = 625

 Score =  141 bits (355), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 111/371 (29%), Positives = 181/371 (48%), Gaps = 30/371 (8%)

Query: 6   GAQHAKEEISKRSFFKPSKQFIKTYLKSF-PNDPILQPDGLSNGVELTNGDTNESHELDL 64
            +  A E +SKR    PS  FI  YL +F P+     P+  S G +LT            
Sbjct: 265 ASSRAAEILSKREANLPSPTFISAYLAAFRPHPKPALPENPSQG-DLT------------ 311

Query: 65  LSKAKRAFEHEDYLTAIRHCTEEIE-STSSNHTKALARLLRATVYIFTSQSTKAIEDLTQ 123
           LS A  A E  DY  A+ +  E IE   SS   +A A  LR T       +  A +DL +
Sbjct: 312 LSLAFDALEAADYPHALTYAAESIEQGISSKKGEAEAYNLRGTFKFLMGNAEGARDDLQK 371

Query: 124 LVEDTSVDPKIKVNAHIKRAVVHLHAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCL 183
            ++   +D    V + +K A VH+    D   AF D + A + D +  D YY RGQ+Y +
Sbjct: 372 SLD---IDSGF-VQSWVKIASVHMELG-DPATAFGDFEAAIRHDADNPDIYYHRGQVYFI 426

Query: 184 FGQYEEALRNLDKTIALNPNFHVARAQRHFVVHKMIVPGDRERVEQSLKEFRNFVDTHSN 243
             ++++AL +  K++ L+ +F     Q     +KM        V  S+  FR  +    +
Sbjct: 427 TQEFDKALADYTKSVQLDSSFIFPHIQTAVCQYKM------GNVGSSMASFRRILREFPD 480

Query: 244 VVEACTLFAQVLVDQEDFDGAEEYFNRSIRVD----PENASLYVHRAMLMLQARGNVDEA 299
             EA   + ++L+DQ+ F  + + F++SI +D    P N   +V++A+ + Q + ++  A
Sbjct: 481 RGEASNYYGEILLDQQKFSESLDRFDKSIELDKERKPRNVLPFVNKALALFQWKQDIAGA 540

Query: 300 IKLIEKAISIDKSCMFAYETLGTIEVQRGRLEEAVKCFNKALPLARDEAELSHIYSLRDA 359
             L ++A+ ID  C  A  TL  + +Q+G+++EA+K F K+  LAR E EL +  +   A
Sbjct: 541 EALCKEALEIDPDCDVAVATLAQLSLQQGKIDEAIKWFEKSAQLARTEGELINAITYEHA 600

Query: 360 AIAQMKVCERY 370
           + AQ+   + Y
Sbjct: 601 SKAQVHFLKTY 611



 Score = 39.3 bits (90), Expect = 5.2,   Method: Compositional matrix adjust.
 Identities = 18/54 (33%), Positives = 32/54 (59%)

Query: 463 SDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNF 516
            D   AF D + A + D +  D YY RGQ+Y +  ++++AL +  K++ L+ +F
Sbjct: 394 GDPATAFGDFEAAIRHDADNPDIYYHRGQVYFITQEFDKALADYTKSVQLDSSF 447


>gi|239614518|gb|EEQ91505.1| import receptor [Ajellomyces dermatitidis ER-3]
 gi|327351535|gb|EGE80392.1| import receptor [Ajellomyces dermatitidis ATCC 18188]
          Length = 635

 Score =  140 bits (354), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 111/382 (29%), Positives = 188/382 (49%), Gaps = 36/382 (9%)

Query: 22  PSKQFIKTYLKSFPNDPILQPDGLSNGVELTNGDTNESHELDLLSKAKRAFEHEDYLTAI 81
           P   F+  YL+SF   P+  P+GL   VEL             L+ ++     + Y  A 
Sbjct: 275 PGATFVSNYLQSFRPRPL--PEGLGEDVELDEDSGKGQLRKGFLALSEST--GDGYEEAA 330

Query: 82  RHCTEEIESTSSNHTKALARLLRATVYIFTSQSTKAIEDLTQLVEDTSVDPKIKVNAHIK 141
           R   + +E  +  + +ALA  +RAT    T     A++DL + VE   +DP + V ++IK
Sbjct: 331 RAFEKSLELGNLGNFEALALNMRATFTYLTGDVQAALQDLNKSVE---LDPSL-VQSYIK 386

Query: 142 RAVVHLH------AASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLD 195
           RA +HL       AA DF  A A      K DP++   YY R Q++ + G+  EA ++  
Sbjct: 387 RASLHLELGNREAAADDFDLAVAQ----NKDDPDI---YYHRAQLHFILGELPEAAKDYQ 439

Query: 196 KTIALNPNFHVARAQRHFVVHKMIVPGDRERVEQSLKEFRNFVDTHSNVVEACTLFAQVL 255
           K+I ++ +F  +  Q     +KM        V  ++  FR  V    NV +    + ++L
Sbjct: 440 KSIDVDRDFIYSHIQLGVTQYKM------GSVASAMATFRRSVKNFENVSDVYNYYGELL 493

Query: 256 VDQEDFDGAEEYFNRSIRVDPENASL------YVHRAMLMLQARGNVDEAIKLIEKAISI 309
           +DQ+    A E F++++ ++ +N          +++A+ + Q + +  EA  L +KA+ I
Sbjct: 494 LDQQKHAEAIEKFDKAVELEKKNKPWGINVLPLINKALALFQWKHDFAEAESLCQKALII 553

Query: 310 DKSCMFAYETLGTIEVQRGRLEEAVKCFNKALPLARDEAELSHIYSLRDAAIAQMKVCER 369
           D  C  A  TL  + +Q+G++ EA+K F +A  LAR EAE+ +  S  +A  AQ++V ER
Sbjct: 554 DPECDVAVATLAQLLLQQGKVSEALKYFERAGELARTEAEVINAVSYAEATRAQLEVQER 613

Query: 370 YNIKKKVSPRSQNITKNEKLAI 391
           Y    K++ R Q +     + +
Sbjct: 614 Y---PKLAARLQQVAGAGGMGV 632



 Score = 43.1 bits (100), Expect = 0.36,   Method: Compositional matrix adjust.
 Identities = 27/98 (27%), Positives = 47/98 (47%), Gaps = 11/98 (11%)

Query: 440 TKTIEESEKYGNLEN--------ESGQKHAASDFTKAFADLDEAEKVDPNVADSYYQRGQ 491
            +  E+S + GNL N         +   +   D   A  DL+++ ++DP++  SY +R  
Sbjct: 330 ARAFEKSLELGNLGNFEALALNMRATFTYLTGDVQAALQDLNKSVELDPSLVQSYIKRAS 389

Query: 492 IYCLFGQYEEALRNLDKTIALN---PNFHVARAQRHFV 526
           ++   G  E A  + D  +A N   P+ +  RAQ HF+
Sbjct: 390 LHLELGNREAAADDFDLAVAQNKDDPDIYYHRAQLHFI 427


>gi|261196061|ref|XP_002624434.1| import receptor [Ajellomyces dermatitidis SLH14081]
 gi|239587567|gb|EEQ70210.1| import receptor [Ajellomyces dermatitidis SLH14081]
          Length = 635

 Score =  140 bits (353), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 111/382 (29%), Positives = 188/382 (49%), Gaps = 36/382 (9%)

Query: 22  PSKQFIKTYLKSFPNDPILQPDGLSNGVELTNGDTNESHELDLLSKAKRAFEHEDYLTAI 81
           P   F+  YL+SF   P+  P+GL   VEL             L+ ++     + Y  A 
Sbjct: 275 PGATFVSNYLQSFRPRPL--PEGLGEDVELDEDSGKGQLRKGFLALSEST--GDGYEEAA 330

Query: 82  RHCTEEIESTSSNHTKALARLLRATVYIFTSQSTKAIEDLTQLVEDTSVDPKIKVNAHIK 141
           R   + +E  +  + +ALA  +RAT    T     A++DL + VE   +DP + V ++IK
Sbjct: 331 RAFEKSLELGNLGNFEALALNMRATFTYLTGDVQAALQDLNKSVE---LDPSL-VQSYIK 386

Query: 142 RAVVHLH------AASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLD 195
           RA +HL       AA DF  A A      K DP++   YY R Q++ + G+  EA ++  
Sbjct: 387 RASLHLELGNREAAADDFDLAVAQ----NKDDPDI---YYHRAQLHFILGELPEAAKDYQ 439

Query: 196 KTIALNPNFHVARAQRHFVVHKMIVPGDRERVEQSLKEFRNFVDTHSNVVEACTLFAQVL 255
           K+I ++ +F  +  Q     +KM        V  ++  FR  V    NV +    + ++L
Sbjct: 440 KSIDVDRDFIYSHIQLGVTQYKM------GSVASAMATFRRSVKNFENVSDVYNYYGELL 493

Query: 256 VDQEDFDGAEEYFNRSIRVDPENASL------YVHRAMLMLQARGNVDEAIKLIEKAISI 309
           +DQ+    A E F++++ ++ +N          +++A+ + Q + +  EA  L +KA+ I
Sbjct: 494 LDQQKHAEAIEKFDKAVELEKKNKPWGINVLPLINKALALFQWKHDFAEAESLCQKALII 553

Query: 310 DKSCMFAYETLGTIEVQRGRLEEAVKCFNKALPLARDEAELSHIYSLRDAAIAQMKVCER 369
           D  C  A  TL  + +Q+G++ EA+K F +A  LAR EAE+ +  S  +A  AQ++V ER
Sbjct: 554 DPECDVAVATLAQLLLQQGKVSEALKYFERAGELARTEAEVINAVSYAEATRAQLEVQER 613

Query: 370 YNIKKKVSPRSQNITKNEKLAI 391
           Y    K++ R Q +     + +
Sbjct: 614 Y---PKLAARLQQVAGAGGMGV 632



 Score = 43.1 bits (100), Expect = 0.39,   Method: Compositional matrix adjust.
 Identities = 27/98 (27%), Positives = 47/98 (47%), Gaps = 11/98 (11%)

Query: 440 TKTIEESEKYGNLEN--------ESGQKHAASDFTKAFADLDEAEKVDPNVADSYYQRGQ 491
            +  E+S + GNL N         +   +   D   A  DL+++ ++DP++  SY +R  
Sbjct: 330 ARAFEKSLELGNLGNFEALALNMRATFTYLTGDVQAALQDLNKSVELDPSLVQSYIKRAS 389

Query: 492 IYCLFGQYEEALRNLDKTIALN---PNFHVARAQRHFV 526
           ++   G  E A  + D  +A N   P+ +  RAQ HF+
Sbjct: 390 LHLELGNREAAADDFDLAVAQNKDDPDIYYHRAQLHFI 427


>gi|389640675|ref|XP_003717970.1| mitochondrial import receptor subunit tom-70 [Magnaporthe oryzae
           70-15]
 gi|351640523|gb|EHA48386.1| mitochondrial import receptor subunit tom-70 [Magnaporthe oryzae
           70-15]
 gi|440471034|gb|ELQ40071.1| mitochondrial precursor proteins import receptor [Magnaporthe
           oryzae Y34]
 gi|440490265|gb|ELQ69840.1| mitochondrial precursor proteins import receptor [Magnaporthe
           oryzae P131]
          Length = 622

 Score =  140 bits (352), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 108/368 (29%), Positives = 178/368 (48%), Gaps = 24/368 (6%)

Query: 22  PSKQFIKTYLKSFPNDPILQPDGLSNGVELTNGDTNESHELDLLSKAKRAFEHEDYLTAI 81
           PS  FI  YL+SF   P  +P GL + V+L         +  L    K+  +   Y  A 
Sbjct: 265 PSPTFIGNYLQSFRAKP--RPAGLEDTVDLPEDSGKGQLQRGLAELEKKTGDR--YEAAA 320

Query: 82  RHCTEEIESTSSNHTKALARLLRATVYIFTSQSTKAIEDLTQLVEDTSVDPKIKVNAHIK 141
               + ++       +ALA  +R T      +  +A++DLT+ VE   +DP +    +IK
Sbjct: 321 EAFDKALQLGDLGEYEALAYNMRGTFKCLRGKHEEALQDLTKCVE---LDPSM-TQGYIK 376

Query: 142 RAVVHLHAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALN 201
           RA ++L       +A AD + A   +P   D YY R Q++ + G++ EA ++  K+I L+
Sbjct: 377 RASMYLELGKT-QEAQADFETASTQNPEDPDIYYHRAQLHFIQGEFPEAAKDYQKSIDLD 435

Query: 202 PNFHVARAQRHFVVHKMIVPGDRERVEQSLKEFRNFVDTHSNVVEACTLFAQVLVDQEDF 261
            +F  +  Q     +KM        +  S+  FR  V     V E    F ++L+DQ  F
Sbjct: 436 RDFIFSHIQLGVTQYKM------GSIASSMATFRRCVKNFEKVPEVYNYFGELLMDQNRF 489

Query: 262 DGAEEYFNRSIRVDPE------NASLYVHRAMLMLQARGNVDEAIKLIEKAISIDKSCMF 315
             A E F+ +I ++        N    +++A+ + Q + +  EA KL EKA+ ID  C  
Sbjct: 490 PDAVEKFDTAIELEKSARPTDMNVLPLINKALALFQWKQDFGEAEKLCEKALIIDPECDI 549

Query: 316 AYETLGTIEVQRGRLEEAVKCFNKALPLARDEAELSHIYSLRDAAIAQMKVCERYNIKKK 375
           A  T+  +++Q+G++ EA+K F +A  LAR E EL +  S  +A   Q+ V E+Y    K
Sbjct: 550 AVATMAQLQLQQGKVTEALKQFERAAELARTEGELVNALSYAEATRTQITVQEKY---PK 606

Query: 376 VSPRSQNI 383
           ++ R Q +
Sbjct: 607 LAARLQGM 614



 Score = 41.2 bits (95), Expect = 1.6,   Method: Compositional matrix adjust.
 Identities = 28/81 (34%), Positives = 44/81 (54%), Gaps = 13/81 (16%)

Query: 452 LENESGQKH--AASDFTKAF--ADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLD 507
           LE ++G ++  AA  F KA    DL E E +      +Y  RG   CL G++EEAL++L 
Sbjct: 308 LEKKTGDRYEAAAEAFDKALQLGDLGEYEAL------AYNMRGTFKCLRGKHEEALQDLT 361

Query: 508 KTIALNPNF---HVARAQRHF 525
           K + L+P+    ++ RA  + 
Sbjct: 362 KCVELDPSMTQGYIKRASMYL 382


>gi|258564825|ref|XP_002583157.1| mitochondrial protein import receptor [Uncinocarpus reesii 1704]
 gi|237906858|gb|EEP81259.1| mitochondrial protein import receptor [Uncinocarpus reesii 1704]
          Length = 632

 Score =  139 bits (349), Expect = 5e-30,   Method: Compositional matrix adjust.
 Identities = 108/363 (29%), Positives = 182/363 (50%), Gaps = 37/363 (10%)

Query: 22  PSKQFIKTYLKSFPNDPILQPDGLSNGVELTNGDTNESHELDLLSKAKRAFEH--EDYLT 79
           PS  F+  YL+SF   P+  P+GL++  EL      ES +  L    +   +H  + Y  
Sbjct: 273 PSATFVSNYLQSFRPKPV--PEGLNDDAELQE----ESGKGQLRKGLQGIGKHTGDGYEE 326

Query: 80  AIRHCTEEIESTSSNHTKALARLLRATVYIFTSQSTKAIEDLTQLVEDTSVDPKIKVNAH 139
           A R   + +E       +ALA  +RAT       +  A+ DL + +E   +DP + V ++
Sbjct: 327 AARSFEKALELGDLEAFEALALNMRATFTYLAGDADSALNDLNKSIE---LDPSL-VQSY 382

Query: 140 IKRAVVHLH------AASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRN 193
           IKRA +HL       AA +F  A A      K DP++   YY R Q++ + G+  EA ++
Sbjct: 383 IKRASLHLEMGNREAAADNFDLALAQ----NKDDPDI---YYHRAQLHFILGELAEAAKD 435

Query: 194 LDKTIALNPNFHVARAQRHFVVHKMIVPGDRERVEQSLKEFRNFVDTHSNVVEACTLFAQ 253
             K+I L+ +F  +  Q     +KM        V  ++  FR  +    +V +    + +
Sbjct: 436 YQKSIDLDRDFIYSHIQLGVAQYKM------GSVASAMATFRRTLKNFEDVADVYNYYGE 489

Query: 254 VLVDQEDFDGAEEYFNRSIRVDPE------NASLYVHRAMLMLQARGNVDEAIKLIEKAI 307
           +L+DQ+ F+ A E F+R++ ++        N    +++A+ + Q + +  EA  L +KA+
Sbjct: 490 LLLDQQKFEEAIEKFDRAVELEKSHKPWGINVLPLINKALALFQWKHDFQEAENLCQKAL 549

Query: 308 SIDKSCMFAYETLGTIEVQRGRLEEAVKCFNKALPLARDEAELSHIYSLRDAAIAQMKVC 367
            ID  C  A  TL  + +Q+G++ EA+K F +A  LAR EAE+ +  S  +A  AQ+ V 
Sbjct: 550 IIDPECDIAVATLAQLLLQQGKVSEALKYFERAAELARTEAEVVNAISYAEATRAQLDVQ 609

Query: 368 ERY 370
           +RY
Sbjct: 610 DRY 612



 Score = 43.5 bits (101), Expect = 0.26,   Method: Compositional matrix adjust.
 Identities = 23/70 (32%), Positives = 38/70 (54%), Gaps = 3/70 (4%)

Query: 460 HAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALN---PNF 516
           + A D   A  DL+++ ++DP++  SY +R  ++   G  E A  N D  +A N   P+ 
Sbjct: 356 YLAGDADSALNDLNKSIELDPSLVQSYIKRASLHLEMGNREAAADNFDLALAQNKDDPDI 415

Query: 517 HVARAQRHFV 526
           +  RAQ HF+
Sbjct: 416 YYHRAQLHFI 425


>gi|225554981|gb|EEH03275.1| s import receptor [Ajellomyces capsulatus G186AR]
          Length = 631

 Score =  138 bits (348), Expect = 6e-30,   Method: Compositional matrix adjust.
 Identities = 111/384 (28%), Positives = 188/384 (48%), Gaps = 40/384 (10%)

Query: 22  PSKQFIKTYLKSFPNDPILQPDGLSNGVEL--TNGDTNESHELDLLSKAKRAFEHEDYLT 79
           PS  F+  YL+SF   P+  PDGL   VEL   NG          LSK       + Y  
Sbjct: 271 PSATFVSNYLQSFRPRPL--PDGLGEDVELDEENGKGQLRKGFLALSKPT----GDGYEE 324

Query: 80  AIRHCTEEIESTSSNHTKALARLLRATVYIFTSQSTKAIEDLTQLVEDTSVDPKIKVNAH 139
           A +   + +E  +    +ALA  +RAT       +  A++DL + VE   +DP + V ++
Sbjct: 325 AAKAFEKSLELGNLGSFEALALNMRATFTYLAGDAQAALQDLNKSVE---LDPSL-VQSY 380

Query: 140 IKRAVVHLH------AASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRN 193
           IKRA +HL       AA DF  A A      K DP++   YY R Q++ + G+  EA ++
Sbjct: 381 IKRASLHLELGNREAAADDFDLAVAQ----NKDDPDI---YYHRAQLHFILGELPEAAKD 433

Query: 194 LDKTIALNPNFHVARAQRHFVVHKMIVPGDRERVEQSLKEFRNFVDTHSNVVEACTLFAQ 253
             K+I ++ +F  +  Q     +KM        V  ++  FR  V    N+ +    + +
Sbjct: 434 YQKSIDIDRDFIYSHIQLGVTQYKM------GSVASAMATFRRSVKNFENISDVYNYYGE 487

Query: 254 VLVDQEDFDGAEEYFNRSIRVDPENASL------YVHRAMLMLQARGNVDEAIKLIEKAI 307
           +L+DQ+    A E F++++ ++ +N          +++A+ + Q + +  EA  L + A+
Sbjct: 488 LLLDQQKHAEAIEKFDKAVELEKKNKPWGVNVLPLINKALALFQWKHDFAEAENLCQAAL 547

Query: 308 SIDKSCMFAYETLGTIEVQRGRLEEAVKCFNKALPLARDEAELSHIYSLRDAAIAQMKVC 367
            ID  C  A  TL  + +Q+G++ +A++ F +A  LAR EAE+ +  S  +A  AQ++V 
Sbjct: 548 IIDPECDIAVATLAQLLLQQGKVSQALEYFERAGELARTEAEVVNAVSYAEATRAQLEVQ 607

Query: 368 ERYNIKKKVSPRSQNITKNEKLAI 391
           ERY    K++ R Q +     + +
Sbjct: 608 ERY---PKLAARLQQVAGAGAMGV 628



 Score = 43.1 bits (100), Expect = 0.36,   Method: Compositional matrix adjust.
 Identities = 28/98 (28%), Positives = 48/98 (48%), Gaps = 11/98 (11%)

Query: 440 TKTIEESEKYGNLEN--------ESGQKHAASDFTKAFADLDEAEKVDPNVADSYYQRGQ 491
            K  E+S + GNL +         +   + A D   A  DL+++ ++DP++  SY +R  
Sbjct: 326 AKAFEKSLELGNLGSFEALALNMRATFTYLAGDAQAALQDLNKSVELDPSLVQSYIKRAS 385

Query: 492 IYCLFGQYEEALRNLDKTIALN---PNFHVARAQRHFV 526
           ++   G  E A  + D  +A N   P+ +  RAQ HF+
Sbjct: 386 LHLELGNREAAADDFDLAVAQNKDDPDIYYHRAQLHFI 423


>gi|198471770|ref|XP_002133837.1| GA23101 [Drosophila pseudoobscura pseudoobscura]
 gi|198146071|gb|EDY72464.1| GA23101 [Drosophila pseudoobscura pseudoobscura]
          Length = 571

 Score =  138 bits (347), Expect = 8e-30,   Method: Compositional matrix adjust.
 Identities = 100/365 (27%), Positives = 173/365 (47%), Gaps = 11/365 (3%)

Query: 10  AKEEISKRSFFKPSKQFIKTYLKSFPNDPILQPDGLSNGVELTNGDTNESHELDLLSKAK 69
           AK+ I +R    PSK  I +Y+++F  DP+L+      G         E+  L    +A 
Sbjct: 207 AKKIIRQRGPLFPSKVRINSYMQAFIADPLLKLSFPRPG--------KENEVLRGFPRAL 258

Query: 70  RAFEHEDYLTAIRHCTEEIESTS-SNHTKALARLLRATVYIFTSQSTKAIEDLTQLVEDT 128
            AF  E +   I  CTEEI++    +  K  ARL+R T ++ +    +  +D   ++ D 
Sbjct: 259 WAFREERFEDVIPACTEEIDTLEYWSQYKTEARLMRGTFHLLSGSFYECHQDFEAVIGDA 318

Query: 129 SVDPKIKVNAHIKRAVVHLHAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYE 188
               +++  A I+ A +         KA    ++AE++  +  D Y+QRG I      YE
Sbjct: 319 KASNELRAYALIRSAALCFQLRRQ-NKAMDAFEQAERLVRDNPDVYHQRGLILSKLQHYE 377

Query: 189 EALRNLDKTIALNPNFHVARAQRHFV-VHKMIVPGDRERVEQSLKEFRNFVDTHSNVVEA 247
            AL + +    L P        +HF   H   +  D +R+E +LK+       H N ++A
Sbjct: 378 VALMDFEMAARLAPGHVSPLVLKHFTEYHLSSLENDPQRMETALKKLGEVPLAHPNSIDA 437

Query: 248 CTLFAQVLVDQEDFDGAEEYFNRSIRVDPENASLYVHRAMLMLQARGNVDEAIKLIEKAI 307
             +   +L  ++DF  A   F R+  + P+N  L VHRA+L L+  GN +  + ++ +AI
Sbjct: 438 YMMRGSLLARRKDFVEALLCFERATELAPKNPVLMVHRAILELKRHGNAELVLPMLYEAI 497

Query: 308 SIDKSCMFAYETLGTIEVQRGRLEEAVKCFNKALPLARDEAELSHIYSLRDAAIAQMKVC 367
            +D  C   Y  L T+E++R   E+A++  N++        E+ H  S+R+A +A+    
Sbjct: 498 ELDPRCHMTYPILVTLEIKRNNPEKAIELLNQSCLHTGTYNEVLHACSMRNALMARTAAR 557

Query: 368 ERYNI 372
           ++  I
Sbjct: 558 KKLGI 562


>gi|154270772|ref|XP_001536240.1| mitochondrial precursor proteins import receptor [Ajellomyces
           capsulatus NAm1]
 gi|150409814|gb|EDN05254.1| mitochondrial precursor proteins import receptor [Ajellomyces
           capsulatus NAm1]
          Length = 631

 Score =  137 bits (345), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 108/382 (28%), Positives = 186/382 (48%), Gaps = 36/382 (9%)

Query: 22  PSKQFIKTYLKSFPNDPILQPDGLSNGVELTNGDTNESHELDLLSKAKRAFEHEDYLTAI 81
           PS  F+  YL+SF   P+  PDGL   VEL             L+ +K     + Y  A 
Sbjct: 271 PSATFVSNYLQSFRPRPL--PDGLGEDVELDEESGKGQLRKGFLALSKPT--GDGYEEAA 326

Query: 82  RHCTEEIESTSSNHTKALARLLRATVYIFTSQSTKAIEDLTQLVEDTSVDPKIKVNAHIK 141
           +   + +E       +ALA  +RAT       +  A++DL + VE   +DP + V ++IK
Sbjct: 327 KAFEKSLELGDLGSFEALALNMRATFTYLAGDAQAALQDLNKSVE---LDPSL-VQSYIK 382

Query: 142 RAVVHLH------AASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLD 195
           RA +HL       AA DF  A A      K DP++   YY R Q++ + G+  EA ++  
Sbjct: 383 RASLHLELGNREAAADDFDLAVAQ----NKDDPDI---YYHRAQLHFILGELPEAAKDYQ 435

Query: 196 KTIALNPNFHVARAQRHFVVHKMIVPGDRERVEQSLKEFRNFVDTHSNVVEACTLFAQVL 255
           K+I ++ +F  +  Q     +KM        V  ++  FR  V    N+ +    + ++L
Sbjct: 436 KSIDIDRDFIYSHIQLGVTQYKM------GSVASAMSTFRRSVKNFENISDVYNYYGELL 489

Query: 256 VDQEDFDGAEEYFNRSIRVDPENASL------YVHRAMLMLQARGNVDEAIKLIEKAISI 309
           +DQ+    A E F++++ ++ +N          +++A+ + Q + +  EA  L + A+ I
Sbjct: 490 LDQQKHAEAIEKFDKAVELEKKNKPWGVNVLPLINKALALFQWKHDFAEAENLCQAALII 549

Query: 310 DKSCMFAYETLGTIEVQRGRLEEAVKCFNKALPLARDEAELSHIYSLRDAAIAQMKVCER 369
           D  C  A  TL  + +Q+G++ +A++ F +A  LAR EAE+ +  S  +A  AQ++V ER
Sbjct: 550 DPECDIAVATLAQLLLQQGKVSQALEYFERAGELARTEAEVVNAVSYAEATRAQLEVQER 609

Query: 370 YNIKKKVSPRSQNITKNEKLAI 391
           Y    K++ R Q +     + +
Sbjct: 610 Y---PKLAARLQQVAGAGAMGV 628



 Score = 42.7 bits (99), Expect = 0.44,   Method: Compositional matrix adjust.
 Identities = 22/70 (31%), Positives = 38/70 (54%), Gaps = 3/70 (4%)

Query: 460 HAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALN---PNF 516
           + A D   A  DL+++ ++DP++  SY +R  ++   G  E A  + D  +A N   P+ 
Sbjct: 354 YLAGDAQAALQDLNKSVELDPSLVQSYIKRASLHLELGNREAAADDFDLAVAQNKDDPDI 413

Query: 517 HVARAQRHFV 526
           +  RAQ HF+
Sbjct: 414 YYHRAQLHFI 423


>gi|240274355|gb|EER37872.1| conserved hypothetical protein [Ajellomyces capsulatus H143]
 gi|325091908|gb|EGC45218.1| s import receptor [Ajellomyces capsulatus H88]
          Length = 631

 Score =  137 bits (344), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 108/382 (28%), Positives = 187/382 (48%), Gaps = 36/382 (9%)

Query: 22  PSKQFIKTYLKSFPNDPILQPDGLSNGVELTNGDTNESHELDLLSKAKRAFEHEDYLTAI 81
           PS  F+  YL+SF   P+  PDGL   VEL             L+ +K     + Y  A 
Sbjct: 271 PSATFVSNYLQSFRPRPL--PDGLGEDVELDEESGKGQLRKGFLALSKPT--GDGYEEAA 326

Query: 82  RHCTEEIESTSSNHTKALARLLRATVYIFTSQSTKAIEDLTQLVEDTSVDPKIKVNAHIK 141
           +   + +E  +    +ALA  +RAT       +  A++DL + VE   +DP + V ++IK
Sbjct: 327 KAFEKSLELGNLGSFEALALNMRATFTYLAGDAQAALQDLNKSVE---LDPSL-VQSYIK 382

Query: 142 RAVVHLH------AASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLD 195
           RA +HL       AA DF  A A      K DP++   YY R Q++ + G+  EA ++  
Sbjct: 383 RASLHLELGNREAAADDFDLAVAQ----NKDDPDI---YYHRAQLHFILGELPEAAKDYQ 435

Query: 196 KTIALNPNFHVARAQRHFVVHKMIVPGDRERVEQSLKEFRNFVDTHSNVVEACTLFAQVL 255
           K+I ++ +F  +  Q     +KM        V  ++  FR  V    N+ +    + ++L
Sbjct: 436 KSIDIDRDFIYSHIQLGVTQYKM------GSVASAMATFRRSVKNFENISDVYNYYGELL 489

Query: 256 VDQEDFDGAEEYFNRSIRVDPENASL------YVHRAMLMLQARGNVDEAIKLIEKAISI 309
           +DQ+    A E F++++ ++ +N          +++A+ + Q + +  EA  L + A+ I
Sbjct: 490 LDQQKHAEAIEKFDKAVELEKKNKPWGVNVLPLINKALALFQWKHDFAEAENLCQAALII 549

Query: 310 DKSCMFAYETLGTIEVQRGRLEEAVKCFNKALPLARDEAELSHIYSLRDAAIAQMKVCER 369
           D  C  A  TL  + +Q+G++ +A++ F +A  LAR EAE+ +  S  +A  AQ++V ER
Sbjct: 550 DPECDIAVATLAQLLLQQGKVSQALEYFERAGELARTEAEVVNAVSYAEATRAQLEVQER 609

Query: 370 YNIKKKVSPRSQNITKNEKLAI 391
           Y    K++ R Q +     + +
Sbjct: 610 Y---PKLAARLQQVAGAGAMGV 628



 Score = 43.1 bits (100), Expect = 0.37,   Method: Compositional matrix adjust.
 Identities = 28/98 (28%), Positives = 48/98 (48%), Gaps = 11/98 (11%)

Query: 440 TKTIEESEKYGNLEN--------ESGQKHAASDFTKAFADLDEAEKVDPNVADSYYQRGQ 491
            K  E+S + GNL +         +   + A D   A  DL+++ ++DP++  SY +R  
Sbjct: 326 AKAFEKSLELGNLGSFEALALNMRATFTYLAGDAQAALQDLNKSVELDPSLVQSYIKRAS 385

Query: 492 IYCLFGQYEEALRNLDKTIALN---PNFHVARAQRHFV 526
           ++   G  E A  + D  +A N   P+ +  RAQ HF+
Sbjct: 386 LHLELGNREAAADDFDLAVAQNKDDPDIYYHRAQLHFI 423


>gi|295668649|ref|XP_002794873.1| mitochondrial precursor proteins import receptor [Paracoccidioides
           sp. 'lutzii' Pb01]
 gi|226285566|gb|EEH41132.1| mitochondrial precursor proteins import receptor [Paracoccidioides
           sp. 'lutzii' Pb01]
          Length = 1571

 Score =  137 bits (344), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 112/382 (29%), Positives = 187/382 (48%), Gaps = 36/382 (9%)

Query: 22  PSKQFIKTYLKSFPNDPILQPDGLSNGVELTNGDTNESHELDLLSKAKRAFEHEDYLTAI 81
           PS  F+  YL+SF   P+  PDGL   VEL    +       LL+ +K     + Y  A 
Sbjct: 173 PSATFVSNYLQSFRQRPL--PDGLGEDVELDEESSKGQLRKGLLAMSKPT--SDGYEEAA 228

Query: 82  RHCTEEIESTSSNHTKALARLLRATVYIFTSQSTKAIEDLTQLVEDTSVDPKIKVNAHIK 141
           R   + +E    +  +ALA  +RAT       +  A++DL + VE   + P + V ++IK
Sbjct: 229 RAFEKALELGDLDEFEALALNMRATFTYLAGDAQAALQDLNKSVE---LSPSL-VQSYIK 284

Query: 142 RAVVHLH------AASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLD 195
           RA +HL       AA DF  A A      K DP++   YY R Q++ + G+  EA ++  
Sbjct: 285 RASLHLELGNREAAADDFDLAVAQ----NKDDPDI---YYHRAQLHFILGELPEAAKDYQ 337

Query: 196 KTIALNPNFHVARAQRHFVVHKMIVPGDRERVEQSLKEFRNFVDTHSNVVEACTLFAQVL 255
           K+I L+ +F  +  Q     +KM        V  ++  FR  V     V +    + ++L
Sbjct: 338 KSIDLDRDFIYSHIQLGVTQYKM------GSVVSAMATFRRSVKNFEKVSDVYNYYGELL 391

Query: 256 VDQEDFDGAEEYFNRSIRVDPENASL------YVHRAMLMLQARGNVDEAIKLIEKAISI 309
           +DQ+    A E F++++ ++  N          +++A+ + Q + +  EA  L +KA+ I
Sbjct: 392 LDQQKHAEAIEKFDKAVELEKTNKPWGINVLPLINKALALFQWKHDFTEAENLCQKALII 451

Query: 310 DKSCMFAYETLGTIEVQRGRLEEAVKCFNKALPLARDEAELSHIYSLRDAAIAQMKVCER 369
           D  C  A  TL  + +Q+G++ +A+K F +A  LAR EAE+ +  S  +A  AQ++V ER
Sbjct: 452 DPECDIAVATLAQLLLQQGKVSQALKYFERAGELARTEAEVINAVSYAEATRAQLEVQER 511

Query: 370 YNIKKKVSPRSQNITKNEKLAI 391
           Y    K++ R Q +     + +
Sbjct: 512 Y---PKLAARLQQVAGAAAMGV 530



 Score = 40.8 bits (94), Expect = 2.0,   Method: Compositional matrix adjust.
 Identities = 21/68 (30%), Positives = 36/68 (52%), Gaps = 3/68 (4%)

Query: 462 ASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALN---PNFHV 518
           A D   A  DL+++ ++ P++  SY +R  ++   G  E A  + D  +A N   P+ + 
Sbjct: 258 AGDAQAALQDLNKSVELSPSLVQSYIKRASLHLELGNREAAADDFDLAVAQNKDDPDIYY 317

Query: 519 ARAQRHFV 526
            RAQ HF+
Sbjct: 318 HRAQLHFI 325


>gi|195164283|ref|XP_002022978.1| GL16562 [Drosophila persimilis]
 gi|194105040|gb|EDW27083.1| GL16562 [Drosophila persimilis]
          Length = 569

 Score =  136 bits (343), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 102/375 (27%), Positives = 180/375 (48%), Gaps = 13/375 (3%)

Query: 10  AKEEISKRSFFKPSKQFIKTYLKSFPNDPILQPDGLSNGVELTNGDTNESHELDLLSKAK 69
           AK+ + +R    PSK  I +Y+++F  DP+++   LS    +T     E+  L    +A 
Sbjct: 207 AKKIMRQRGPLFPSKVRINSYMQAFIADPLMK---LSFPRPVT-----ENEVLRGFPRAL 258

Query: 70  RAFEHEDYLTAIRHCTEEIESTSSNHTKALARLLRATVYIFTSQSTKAIEDLTQLVEDTS 129
            AF  E +   I  CTEEI++  S + K  ARL+R T ++ +    +  +D   ++ D  
Sbjct: 259 WAFREERFEDVIPACTEEIDTLESQY-KTEARLMRGTFHLLSGSFYECHQDFEAVIGDAK 317

Query: 130 VDPKIKVNAHIKRAVVHLHAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEE 189
            + +++  A I+ A +         KA    ++AE++  +  D Y+QRG I      YE 
Sbjct: 318 ANNELRAYALIRSAALCFQLRRQ-NKAMDAFEQAERLVRDNPDVYHQRGLILSKLQHYEV 376

Query: 190 ALRNLDKTIALNPNFHVARAQRHFV-VHKMIVPGDRERVEQSLKEFRNFVDTHSNVVEAC 248
           AL + +    L P        +HF   H   +  D +R+E +LK+       H N ++A 
Sbjct: 377 ALMDFEMAARLAPGHVSPLVLKHFTEYHLSSLENDPQRMETALKKLGEVPLAHPNSIDAY 436

Query: 249 TLFAQVLVDQEDFDGAEEYFNRSIRVDPENASLYVHRAMLMLQARGNVDEAIKLIEKAIS 308
            +   +L  ++DF  A   F R+  + P+N  L V+RA+L L+  GN +  + ++ +AI 
Sbjct: 437 MMRGSLLARRKDFVEALLCFERATELAPKNPVLMVNRAILELKRHGNAELVLPMLYEAIE 496

Query: 309 IDKSCMFAYETLGTIEVQRGRLEEAVKCFNKALPLARDEAELSHIYSLRDAAIAQMKVCE 368
           +D  C   Y  L T+E++R   E+A++  N++        E+ H  S+R+A +A  +   
Sbjct: 497 LDPRCHMTYPILVTLEIKRNNPEKAIELLNQSCLHTGTYNEVLHACSMRNALMA--RTVA 554

Query: 369 RYNIKKKVSPRSQNI 383
           R N+     P    +
Sbjct: 555 RKNLGIDCDPSKTTV 569


>gi|119191157|ref|XP_001246185.1| hypothetical protein CIMG_05626 [Coccidioides immitis RS]
 gi|392869035|gb|EAS30394.2| protein import receptor [Coccidioides immitis RS]
          Length = 632

 Score =  136 bits (342), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 113/371 (30%), Positives = 181/371 (48%), Gaps = 53/371 (14%)

Query: 22  PSKQFIKTYLKSFPNDPILQPDGLSNGVEL---------TNGDTN-ESHELDLLSKAKRA 71
           PS  F+  YL+SF   P   P+GLS   EL          NG      H  D   +A RA
Sbjct: 273 PSATFVSNYLQSF--RPKATPEGLSEEAELDEESGKGQLRNGFQGIAKHTSDGYEEAARA 330

Query: 72  FEHEDYLTAIRHCTEEIESTSSNHTKALARLLRATVYIFTSQSTKAIEDLTQLVEDTSVD 131
           FE    L A+    E+ E        ALA  +RAT       +  A++DL + +E   +D
Sbjct: 331 FEKALELGAL----EDFE--------ALALNMRATFTYLAGDADSAMKDLNKSIE---LD 375

Query: 132 PKIKVNAHIKRAVVHLH------AASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFG 185
           P + V ++IKRA +HL       AA +F  A     +  K DP++   YY R Q++ + G
Sbjct: 376 PSL-VQSYIKRASLHLEMGNREAAADNFDLAL----QQNKDDPDI---YYHRAQLHFILG 427

Query: 186 QYEEALRNLDKTIALNPNFHVARAQRHFVVHKMIVPGDRERVEQSLKEFRNFVDTHSNVV 245
           +  EA ++  K+I L+ +F  +  Q     +KM        V  ++  FR  +    +V 
Sbjct: 428 ELAEAAKDYQKSIDLDRDFIYSHIQLGVAQYKM------GSVASAMATFRRTLKNFEDVA 481

Query: 246 EACTLFAQVLVDQEDFDGAEEYFNRSIRVDPE------NASLYVHRAMLMLQARGNVDEA 299
           +    + ++L+DQ+ F  A E F+R++ ++        N    +++A+ + Q + +  EA
Sbjct: 482 DVYNYYGELLLDQQKFSEAIEKFDRAVELEKSHKPWGINVLPLINKALALFQWKHDFQEA 541

Query: 300 IKLIEKAISIDKSCMFAYETLGTIEVQRGRLEEAVKCFNKALPLARDEAELSHIYSLRDA 359
             L +KA+ ID  C  A  TL  + +Q+G++ +A+K F +A  LAR EAE+ +  S  +A
Sbjct: 542 ENLCQKALIIDPECDIAVATLAQLLLQQGKVSQALKYFERAAELARTEAEVVNAISYAEA 601

Query: 360 AIAQMKVCERY 370
             AQ+ V ERY
Sbjct: 602 TRAQLDVQERY 612



 Score = 41.6 bits (96), Expect = 1.1,   Method: Compositional matrix adjust.
 Identities = 22/70 (31%), Positives = 37/70 (52%), Gaps = 3/70 (4%)

Query: 460 HAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALN---PNF 516
           + A D   A  DL+++ ++DP++  SY +R  ++   G  E A  N D  +  N   P+ 
Sbjct: 356 YLAGDADSAMKDLNKSIELDPSLVQSYIKRASLHLEMGNREAAADNFDLALQQNKDDPDI 415

Query: 517 HVARAQRHFV 526
           +  RAQ HF+
Sbjct: 416 YYHRAQLHFI 425


>gi|303315563|ref|XP_003067789.1| TPR Domain containing protein [Coccidioides posadasii C735 delta
           SOWgp]
 gi|240107459|gb|EER25644.1| TPR Domain containing protein [Coccidioides posadasii C735 delta
           SOWgp]
 gi|320035356|gb|EFW17297.1| import receptor [Coccidioides posadasii str. Silveira]
          Length = 632

 Score =  136 bits (342), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 113/371 (30%), Positives = 181/371 (48%), Gaps = 53/371 (14%)

Query: 22  PSKQFIKTYLKSFPNDPILQPDGLSNGVEL---------TNGDTN-ESHELDLLSKAKRA 71
           PS  F+  YL+SF   P   P+GLS   EL          NG      H  D   +A RA
Sbjct: 273 PSATFVSNYLQSF--RPKATPEGLSEEAELDEESGKGQLRNGFQGIAKHTSDGYEEAARA 330

Query: 72  FEHEDYLTAIRHCTEEIESTSSNHTKALARLLRATVYIFTSQSTKAIEDLTQLVEDTSVD 131
           FE    L A+    E+ E        ALA  +RAT       +  A++DL + +E   +D
Sbjct: 331 FEKALELGAL----EDFE--------ALALNMRATFTYLAGDADSAMKDLNKSIE---LD 375

Query: 132 PKIKVNAHIKRAVVHLH------AASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFG 185
           P + V ++IKRA +HL       AA +F  A     +  K DP++   YY R Q++ + G
Sbjct: 376 PSL-VQSYIKRASLHLEMGNREAAADNFDLAL----QQNKDDPDI---YYHRAQLHFILG 427

Query: 186 QYEEALRNLDKTIALNPNFHVARAQRHFVVHKMIVPGDRERVEQSLKEFRNFVDTHSNVV 245
           +  EA ++  K+I L+ +F  +  Q     +KM        V  ++  FR  +    +V 
Sbjct: 428 ELAEAAKDYQKSIDLDRDFIYSHIQLGVAQYKM------GSVASAMATFRRTLKNFEDVA 481

Query: 246 EACTLFAQVLVDQEDFDGAEEYFNRSIRVDPE------NASLYVHRAMLMLQARGNVDEA 299
           +    + ++L+DQ+ F  A E F+R++ ++        N    +++A+ + Q + +  EA
Sbjct: 482 DVYNYYGELLLDQQKFSEAIEKFDRAVELEKSHKPWGINVLPLINKALALFQWKHDFQEA 541

Query: 300 IKLIEKAISIDKSCMFAYETLGTIEVQRGRLEEAVKCFNKALPLARDEAELSHIYSLRDA 359
             L +KA+ ID  C  A  TL  + +Q+G++ +A+K F +A  LAR EAE+ +  S  +A
Sbjct: 542 ENLCQKALIIDPECDIAVATLAQLLLQQGKVSQALKYFERAAELARTEAEVVNAISYAEA 601

Query: 360 AIAQMKVCERY 370
             AQ+ V ERY
Sbjct: 602 TRAQLDVQERY 612



 Score = 41.6 bits (96), Expect = 1.1,   Method: Compositional matrix adjust.
 Identities = 22/70 (31%), Positives = 37/70 (52%), Gaps = 3/70 (4%)

Query: 460 HAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALN---PNF 516
           + A D   A  DL+++ ++DP++  SY +R  ++   G  E A  N D  +  N   P+ 
Sbjct: 356 YLAGDADSAMKDLNKSIELDPSLVQSYIKRASLHLEMGNREAAADNFDLALQQNKDDPDI 415

Query: 517 HVARAQRHFV 526
           +  RAQ HF+
Sbjct: 416 YYHRAQLHFI 425


>gi|328851899|gb|EGG01049.1| hypothetical protein MELLADRAFT_75686 [Melampsora larici-populina
           98AG31]
          Length = 615

 Score =  135 bits (340), Expect = 5e-29,   Method: Compositional matrix adjust.
 Identities = 102/371 (27%), Positives = 178/371 (47%), Gaps = 29/371 (7%)

Query: 6   GAQHAKEEISKRSFFKPSKQFIKTYLKSFPNDPILQPDGLSNGVELTNGDTNESHELDLL 65
            ++ AK+ I +R    PS   I+ YL +F   P  +P       EL          LDL 
Sbjct: 259 ASERAKQLIKERGPRLPSAMIIRAYLNAFRPKP--KP-------ELPEEPNQGDRTLDLA 309

Query: 66  SKAKRAFEHEDYLTAIRHCTEEIESTSSNHTKALARLLRATVYIFTSQSTKAIEDLTQ-L 124
             A  A+++E   +      E++ ST   H +A A +++AT      QS  A+E   + L
Sbjct: 310 YDALEAYKYEHACSLFMEAVEQVPST--EHLRANAYMMKATFLFLMGQSALALETFNEAL 367

Query: 125 VEDTSVDPKIKVNAHIKRAVVHLHAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLF 184
           V +  +     + A +++A V +   S   +A  D   A  ++ + AD YY R Q+Y + 
Sbjct: 368 VHEPGL-----IQAWVRKASVDVELGS-LERAMEDFQVALSINESEADIYYHRAQVYNVT 421

Query: 185 GQYEEALRNLDKTIALNPNFHVARAQRHFVVHKMIVPGDRERVEQSLKEFRNFVDTHSNV 244
            Q+  A+ + +K+I L+P F  +  Q    ++K    GD   V++S++ F  ++ +H NV
Sbjct: 422 EQHHLAISDYEKSIELDPTFIFSHVQLAVAIYKT---GD---VKRSMEMFEGYLKSHENV 475

Query: 245 VEACTLFAQVLVDQEDFDGAEEYFNRSIRVD-----PENASLYVHRAMLMLQARGNVDEA 299
            E    F ++L  +  FD A + F+ SI +D     P N    V++AM+   +  N+++A
Sbjct: 476 PEVHNYFGELLFAERRFDEAMKQFDLSIELDQQRPGPRNVHPLVNKAMVYATSSSNIEKA 535

Query: 300 IKLIEKAISIDKSCMFAYETLGTIEVQRGRLEEAVKCFNKALPLARDEAELSHIYSLRDA 359
           I+L ++A+ ID  C  A + +   ++Q  +++EA + F K + +A  E  L+       A
Sbjct: 536 IELCQEALKIDSRCDAAIQQIAQFKLQTSQMKEAAEWFGKGVEVAMTEMGLNQFLQFEAA 595

Query: 360 AIAQMKVCERY 370
           A AQ      Y
Sbjct: 596 AKAQQAFVSEY 606


>gi|169778217|ref|XP_001823574.1| import receptor subunit tom-70 [Aspergillus oryzae RIB40]
 gi|83772311|dbj|BAE62441.1| unnamed protein product [Aspergillus oryzae RIB40]
 gi|391872273|gb|EIT81407.1| translocase of outer membrane complex, subunit TOM70/TOM72
           [Aspergillus oryzae 3.042]
          Length = 632

 Score =  135 bits (339), Expect = 7e-29,   Method: Compositional matrix adjust.
 Identities = 102/361 (28%), Positives = 180/361 (49%), Gaps = 33/361 (9%)

Query: 22  PSKQFIKTYLKSFPNDPILQPDGLSNGVELTNGDTNESHELDLLSKAKRAFEHEDYLTAI 81
           PS  F+  YL+SF   P+  P+GL+  V+L+           LL+ A +    + Y  A 
Sbjct: 273 PSPTFVSNYLQSFRPKPL--PEGLAESVDLSEDSGKGQLRKGLLAMALKT--GDGYDEAA 328

Query: 82  RHCTEEIESTSSNHTKALARLLRATVYIFTSQSTKAIEDLTQLVEDTSVDPKIKVNAHIK 141
               + +E       +ALA  LRAT       +  A+ DL + VE   + P + V ++IK
Sbjct: 329 TAFEKALELGDLGEFEALALNLRATFTYLEGNAQAALADLNKSVE---LQPSL-VQSYIK 384

Query: 142 RAVVHLH------AASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLD 195
           RA +HL       AA DF  A +        + + AD YY R Q++ + G++ EA ++  
Sbjct: 385 RASLHLELGNKDAAADDFELAISH-------NKDDADIYYHRAQLHFILGEFAEAAKDYQ 437

Query: 196 KTIALNPNFHVARAQRHFVVHKMIVPGDRERVEQSLKEFRNFVDTHSNVVEACTLFAQVL 255
           K+I L+  F  +  Q     +KM        V  ++  FR  V    +V +    + ++L
Sbjct: 438 KSIDLDRTFIYSHIQLGVTQYKM------GSVASAMATFRRSVKNFEDVPDVYNYYGELL 491

Query: 256 VDQEDFDGAEEYFNRSIRVDPENASL------YVHRAMLMLQARGNVDEAIKLIEKAISI 309
           +DQ++F  A E F++++ ++ ++  +       +++A+ + Q + +  EA  L +KA+ I
Sbjct: 492 LDQQNFSEAIEKFDKAVEMEKQSKPMGINVLPLINKALALFQWKHDFQEAENLCQKALII 551

Query: 310 DKSCMFAYETLGTIEVQRGRLEEAVKCFNKALPLARDEAELSHIYSLRDAAIAQMKVCER 369
           D  C  A  T+  + +Q+G++ +A+K F +A  LAR EAE+ +  S  +A   Q++V E+
Sbjct: 552 DPECDIAVGTMAQLLLQQGKVSQALKYFERAAELARTEAEIINAISYAEATRTQLEVQEK 611

Query: 370 Y 370
           Y
Sbjct: 612 Y 612


>gi|238495490|ref|XP_002378981.1| mitochondrial outer membrane translocase receptor (TOM70), putative
           [Aspergillus flavus NRRL3357]
 gi|220695631|gb|EED51974.1| mitochondrial outer membrane translocase receptor (TOM70), putative
           [Aspergillus flavus NRRL3357]
          Length = 638

 Score =  135 bits (339), Expect = 7e-29,   Method: Compositional matrix adjust.
 Identities = 102/361 (28%), Positives = 180/361 (49%), Gaps = 33/361 (9%)

Query: 22  PSKQFIKTYLKSFPNDPILQPDGLSNGVELTNGDTNESHELDLLSKAKRAFEHEDYLTAI 81
           PS  F+  YL+SF   P+  P+GL+  V+L+           LL+ A +    + Y  A 
Sbjct: 279 PSPTFVSNYLQSFRPKPL--PEGLAESVDLSEDSGKGQLRKGLLAMALKT--GDGYDEAA 334

Query: 82  RHCTEEIESTSSNHTKALARLLRATVYIFTSQSTKAIEDLTQLVEDTSVDPKIKVNAHIK 141
               + +E       +ALA  LRAT       +  A+ DL + VE   + P + V ++IK
Sbjct: 335 TAFEKALELGDLGEFEALALNLRATFTYLEGNAQAALADLNKSVE---LQPSL-VQSYIK 390

Query: 142 RAVVHLH------AASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLD 195
           RA +HL       AA DF  A +        + + AD YY R Q++ + G++ EA ++  
Sbjct: 391 RASLHLELGNKDAAADDFELAISH-------NKDDADIYYHRAQLHFILGEFAEAAKDYQ 443

Query: 196 KTIALNPNFHVARAQRHFVVHKMIVPGDRERVEQSLKEFRNFVDTHSNVVEACTLFAQVL 255
           K+I L+  F  +  Q     +KM        V  ++  FR  V    +V +    + ++L
Sbjct: 444 KSIDLDRTFIYSHIQLGVTQYKM------GSVASAMATFRRSVKNFEDVPDVYNYYGELL 497

Query: 256 VDQEDFDGAEEYFNRSIRVDPENASL------YVHRAMLMLQARGNVDEAIKLIEKAISI 309
           +DQ++F  A E F++++ ++ ++  +       +++A+ + Q + +  EA  L +KA+ I
Sbjct: 498 LDQQNFSEAIEKFDKAVEMEKQSKPMGINVLPLINKALALFQWKHDFQEAENLCQKALII 557

Query: 310 DKSCMFAYETLGTIEVQRGRLEEAVKCFNKALPLARDEAELSHIYSLRDAAIAQMKVCER 369
           D  C  A  T+  + +Q+G++ +A+K F +A  LAR EAE+ +  S  +A   Q++V E+
Sbjct: 558 DPECDIAVGTMAQLLLQQGKVSQALKYFERAAELARTEAEIINAISYAEATRTQLEVQEK 617

Query: 370 Y 370
           Y
Sbjct: 618 Y 618


>gi|430811218|emb|CCJ31312.1| unnamed protein product, partial [Pneumocystis jirovecii]
          Length = 616

 Score =  134 bits (338), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 96/355 (27%), Positives = 181/355 (50%), Gaps = 28/355 (7%)

Query: 22  PSKQFIKTYLKSFPNDPILQPDGLSNGVELTNGDTNESHELDLLSKAKRAFEHEDYLTAI 81
           PS  FI  YL +F   P   P      +E  +  T + H    L +  +A   ++Y +A 
Sbjct: 276 PSPTFITAYLDAFRPKP--NPK-----IESKDESTGDYH----LKQGFKALSAKNYDSAS 324

Query: 82  RHCTEEIESTSSNHTKALARLLRATVYIFTSQSTKAIEDLTQLVEDTSVDPKIKVNAHIK 141
           +  ++ IE   S   +++A  +  T       +  A+ED  + +E   +DP    N +IK
Sbjct: 325 KSFSKAIELGCSESLQSVAYNMSGTFKFIQGNTHDALEDFNKAIE---IDPNDTQN-YIK 380

Query: 142 RAVVHLHAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALN 201
           RA V++    D +  ++D + A+ V+PN  D YY RGQ++ + G++ EA +N  K+I L+
Sbjct: 381 RASVYMELG-DRSATWSDFETAQSVNPNDPDIYYHRGQMHFITGEFSEAAKNYQKSIDLD 439

Query: 202 PNFHVARAQRHFVVHKMIVPGDRERVEQSLKEFRNFVDTHSNVVEACTLFAQVLVDQEDF 261
            +F  +  Q   V +K+        +  S+  FR  +       +    + ++L+DQ+ F
Sbjct: 440 KDFIFSHIQYGVVQYKL------GNIALSMSIFRKCLKMFQKSSDVYNYYGELLLDQKRF 493

Query: 262 DGAEEYFNRSIRVDPE------NASLYVHRAMLMLQARGNVDEAIKLIEKAISIDKSCMF 315
             A E F+ +I+++        N    +++A+ + Q + ++ EA  L +KA++ID  C  
Sbjct: 494 QDAIEKFDIAIQLEKSSKFTIMNVLPLINKALAVFQWKKDIVEAEALCKKALAIDPGCDV 553

Query: 316 AYETLGTIEVQRGRLEEAVKCFNKALPLARDEAELSHIYSLRDAAIAQMKVCERY 370
           A  T+  + +Q+G++ +A++ F+K+  LAR E+EL +  S  +A   Q++V ++Y
Sbjct: 554 AVATIAQLLLQQGKIVDAIEYFDKSAQLARTESELVNALSYCEATKIQLQVTQKY 608



 Score = 50.4 bits (119), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 29/94 (30%), Positives = 47/94 (50%), Gaps = 10/94 (10%)

Query: 433 EIIPGDPTKTIEESEKYGNLENESGQKHAASDFTKAFADLDEAEKVDPNVADSYYQRGQI 492
           EI P D    I+ +  Y  L + S            ++D + A+ V+PN  D YY RGQ+
Sbjct: 369 EIDPNDTQNYIKRASVYMELGDRSA----------TWSDFETAQSVNPNDPDIYYHRGQM 418

Query: 493 YCLFGQYEEALRNLDKTIALNPNFHVARAQRHFV 526
           + + G++ EA +N  K+I L+ +F  +  Q   V
Sbjct: 419 HFITGEFSEAAKNYQKSIDLDKDFIFSHIQYGVV 452


>gi|302652325|ref|XP_003018016.1| hypothetical protein TRV_07979 [Trichophyton verrucosum HKI 0517]
 gi|291181614|gb|EFE37371.1| hypothetical protein TRV_07979 [Trichophyton verrucosum HKI 0517]
          Length = 632

 Score =  134 bits (337), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 102/355 (28%), Positives = 175/355 (49%), Gaps = 21/355 (5%)

Query: 22  PSKQFIKTYLKSFPNDPILQPDGLSNGVELTNGDTNESHELDLLSKAKRAFEHEDYLTAI 81
           PS  F+  YL+SF   P+  P+ L   VEL            LL+ AK     + Y  A 
Sbjct: 271 PSATFVSNYLQSFRPKPV--PEELDESVELKEDSGLGQLRKGLLAVAKST--GDGYDEAA 326

Query: 82  RHCTEEIESTSSNHTKALARLLRATVYIFTSQSTKAIEDLTQLVEDTSVDPKIKVNAHIK 141
           R   + +E       +ALA  +RAT      ++  A+ DL + +E   +DP + V ++IK
Sbjct: 327 RAFEKALELGELGKLEALALNMRATFTYLAGEAAAALTDLNKSIE---LDPSL-VQSYIK 382

Query: 142 RAVVHLHAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALN 201
           RA ++L    +   A  D D A   + +  D YY R Q++ + G+  EA ++  K+I L+
Sbjct: 383 RASLYLETG-NRESAQDDFDLAVTQNKDDPDIYYHRAQLHFILGELGEAAKDYQKSIDLD 441

Query: 202 PNFHVARAQRHFVVHKMIVPGDRERVEQSLKEFRNFVDTHSNVVEACTLFAQVLVDQEDF 261
            +F  +  Q     +K+        V  ++  F+  +    NV E    + ++L+D + F
Sbjct: 442 RDFIYSHIQLGVTQYKL------GSVASAMATFKRTLKNFENVAEVYNYYGELLLDMQKF 495

Query: 262 DGAEEYFNRSIRVDPENASL------YVHRAMLMLQARGNVDEAIKLIEKAISIDKSCMF 315
             A E F+R++ ++  N          +++A+ + Q + +  EA  L +KA+ ID  C  
Sbjct: 496 SEAIEKFDRAVELEKSNKPWSINVLPLINKALAIFQWKQDFQEAENLCQKALIIDPDCDI 555

Query: 316 AYETLGTIEVQRGRLEEAVKCFNKALPLARDEAELSHIYSLRDAAIAQMKVCERY 370
           A  TL  + +Q+G++ +A+K F +A  LAR EAE+ +  S  +A  AQ++V E+Y
Sbjct: 556 AIATLAQLLLQQGKVSQALKYFERAAELARTEAEVINAVSYAEATRAQLEVQEKY 610



 Score = 41.2 bits (95), Expect = 1.6,   Method: Compositional matrix adjust.
 Identities = 21/70 (30%), Positives = 37/70 (52%), Gaps = 3/70 (4%)

Query: 460 HAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALN---PNF 516
           + A +   A  DL+++ ++DP++  SY +R  +Y   G  E A  + D  +  N   P+ 
Sbjct: 354 YLAGEAAAALTDLNKSIELDPSLVQSYIKRASLYLETGNRESAQDDFDLAVTQNKDDPDI 413

Query: 517 HVARAQRHFV 526
           +  RAQ HF+
Sbjct: 414 YYHRAQLHFI 423


>gi|440631942|gb|ELR01861.1| hypothetical protein GMDG_05048 [Geomyces destructans 20631-21]
          Length = 631

 Score =  134 bits (337), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 97/361 (26%), Positives = 184/361 (50%), Gaps = 33/361 (9%)

Query: 22  PSKQFIKTYLKSFPNDPILQPDGLSNGVELTNGDTNESHELDLLSKAKRAFEHEDYLTAI 81
           PS  F+  Y++SF   P   P+GL  GVE+         +L L++  K+    + Y  A 
Sbjct: 272 PSPTFVTNYMQSFRAKPA--PEGLEIGVEIPEDTGKGQLQLGLIAMDKKT--SDGYEEAS 327

Query: 82  RHCTEEIESTSSNHTKALARLLRATVYIFTSQSTKAIEDLTQLVEDTSVDPKIKVNAHIK 141
           +H +  +E    +  +A A  +R T      ++ +A+ DLT+ +E   ++P +   + IK
Sbjct: 328 KHFSSALELGDIDEHEAFAYNMRGTFKYLRGENLEALADLTKSIE---LNPSL-TQSFIK 383

Query: 142 RAVVHLH------AASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLD 195
           RA +HL       AA+DF KA A  D     DP++   +Y R Q++ + G++ +A ++  
Sbjct: 384 RASMHLELGDKEAAAADFEKARAQNDS----DPDI---FYHRAQLHFILGEFGDAAKDYQ 436

Query: 196 KTIALNPNFHVARAQRHFVVHKMIVPGDRERVEQSLKEFRNFVDTHSNVVEACTLFAQVL 255
           K+I L+ +F  +  Q     +KM        +  S+  F+  +   + V +    + ++L
Sbjct: 437 KSIDLDRDFIFSHIQLGVTQYKM------GSIASSMATFKRTMKAFNQVPDVYNYYGELL 490

Query: 256 VDQEDFDGAEEYFNRSIRVDPENASL------YVHRAMLMLQARGNVDEAIKLIEKAISI 309
           +DQ+ +  A   F+ ++ ++  +  L       +++A+ ++Q + +  EA KL EKA+ I
Sbjct: 491 LDQQKYQDAITKFDTAVEMEKISKPLGMNVLPLINKALALVQWKQDFAEAEKLCEKALII 550

Query: 310 DKSCMFAYETLGTIEVQRGRLEEAVKCFNKALPLARDEAELSHIYSLRDAAIAQMKVCER 369
           D  C  A  T+  + +Q+G++ +A+K F +A  L+R E E+ +  S  +A   Q++V E+
Sbjct: 551 DPECDIAVATMAQLLLQQGKVNDALKYFERAAELSRTEGEIINALSYAEATRTQLEVQEK 610

Query: 370 Y 370
           Y
Sbjct: 611 Y 611


>gi|402085802|gb|EJT80700.1| mitochondrial import receptor subunit tom-70 [Gaeumannomyces
           graminis var. tritici R3-111a-1]
          Length = 634

 Score =  134 bits (337), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 112/380 (29%), Positives = 184/380 (48%), Gaps = 24/380 (6%)

Query: 10  AKEEISKRSFFKPSKQFIKTYLKSFPNDPILQPDGLSNGVELTNGDTNESHELDLLSKAK 69
           AKE ++ +    PS  FI  YL+SF   P  +P GL + V+L         +  L    K
Sbjct: 263 AKEIMATKEPKLPSPTFIGNYLQSFRAKP--RPAGLEDTVDLAEDTGKGQLQRGLAELDK 320

Query: 70  RAFEHEDYLTAIRHCTEEIESTSSNHTKALARLLRATVYIFTSQSTKAIEDLTQLVEDTS 129
           +  +   Y  A     + +E       +ALA  +R T      +  +A+ DLT+ VE   
Sbjct: 321 KTGDR--YEAASAAFDKALELGDLGEYEALAYNMRGTFKCLRGKHEEALADLTKCVE--- 375

Query: 130 VDPKIKVNAHIKRAVVHLHAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEE 189
           +DP +   A+IKRA ++L       +A AD + A + D +  D +Y R Q + + G+  E
Sbjct: 376 LDPTM-TQAYIKRASMYLELGRT-GEAEADFETALEHDESDPDIFYHRAQTHFIKGELPE 433

Query: 190 ALRNLDKTIALNPNFHVARAQRHFVVHKMIVPGDRERVEQSLKEFRNFVDTHSNVVEACT 249
           A ++  K+I L+ +F  +  Q     +KM        +  S+  FR  V     V E   
Sbjct: 434 AAKDYQKSIDLDRDFIFSHIQLGVTQYKM------GSIASSMATFRRCVKNFEKVPEVYN 487

Query: 250 LFAQVLVDQEDFDGAEEYFNRSIRVDPE------NASLYVHRAMLMLQARGNVDEAIKLI 303
            F ++L+DQ  F  A E F+ +I ++        N    +++A+ + Q + + +EA KL 
Sbjct: 488 YFGELLMDQNRFQDAVEKFDTAIELEKSARPTDMNVLPLINKALTLFQWKQDFNEAEKLC 547

Query: 304 EKAISIDKSCMFAYETLGTIEVQRGRLEEAVKCFNKALPLARDEAELSHIYSLRDAAIAQ 363
           EKA+ ID  C  A  T+  +++Q+G++ EA+K F +A  LAR E EL +  S  +A   Q
Sbjct: 548 EKALIIDPECDIAVATMAQLQLQQGKVVEALKQFERAAELARTEGELVNALSYAEATRTQ 607

Query: 364 MKVCERYNIKKKVSPRSQNI 383
           + V E+Y    K++ R Q +
Sbjct: 608 ITVQEKY---PKLAARLQGM 624


>gi|327304168|ref|XP_003236776.1| import receptor [Trichophyton rubrum CBS 118892]
 gi|326462118|gb|EGD87571.1| import receptor [Trichophyton rubrum CBS 118892]
          Length = 632

 Score =  134 bits (336), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 102/355 (28%), Positives = 175/355 (49%), Gaps = 21/355 (5%)

Query: 22  PSKQFIKTYLKSFPNDPILQPDGLSNGVELTNGDTNESHELDLLSKAKRAFEHEDYLTAI 81
           PS  F+  YL+SF   P+  P+ L   VEL            LL+ AK     + Y  A 
Sbjct: 271 PSATFVSNYLQSFRPKPV--PEELDESVELKEDSGLGQLRKGLLAVAKST--GDGYDEAA 326

Query: 82  RHCTEEIESTSSNHTKALARLLRATVYIFTSQSTKAIEDLTQLVEDTSVDPKIKVNAHIK 141
           R   + +E       +ALA  +RAT      ++  A+ DL + +E   +DP + V ++IK
Sbjct: 327 RAFEKALELGELGKLEALALNMRATFTYLAGEAAAALTDLNKSIE---LDPSL-VQSYIK 382

Query: 142 RAVVHLHAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALN 201
           RA ++L    +   A  D D A   + +  D YY R Q++ + G+  EA ++  K+I L+
Sbjct: 383 RASLYLEMG-NRESAQDDFDLAVTQNKDDPDIYYHRAQLHFILGELGEAAKDYQKSIDLD 441

Query: 202 PNFHVARAQRHFVVHKMIVPGDRERVEQSLKEFRNFVDTHSNVVEACTLFAQVLVDQEDF 261
            +F  +  Q     +K+        V  ++  F+  +    NV E    + ++L+D + F
Sbjct: 442 RDFIYSHIQLGVTQYKL------GSVASAMATFKRTLKNFENVAEVYNYYGELLLDMQKF 495

Query: 262 DGAEEYFNRSIRVDPENASL------YVHRAMLMLQARGNVDEAIKLIEKAISIDKSCMF 315
             A E F+R++ ++  N          +++A+ + Q + +  EA  L +KA+ ID  C  
Sbjct: 496 SEAIEKFDRAVELEKSNKPWSINVLPLINKALAIFQWKQDFQEAENLCQKALIIDPDCDI 555

Query: 316 AYETLGTIEVQRGRLEEAVKCFNKALPLARDEAELSHIYSLRDAAIAQMKVCERY 370
           A  TL  + +Q+G++ +A+K F +A  LAR EAE+ +  S  +A  AQ++V E+Y
Sbjct: 556 AIATLAQLLLQQGKVSQALKYFERAAELARTEAEVINAVSYAEATRAQLEVQEKY 610



 Score = 42.0 bits (97), Expect = 0.74,   Method: Compositional matrix adjust.
 Identities = 21/70 (30%), Positives = 37/70 (52%), Gaps = 3/70 (4%)

Query: 460 HAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALN---PNF 516
           + A +   A  DL+++ ++DP++  SY +R  +Y   G  E A  + D  +  N   P+ 
Sbjct: 354 YLAGEAAAALTDLNKSIELDPSLVQSYIKRASLYLEMGNRESAQDDFDLAVTQNKDDPDI 413

Query: 517 HVARAQRHFV 526
           +  RAQ HF+
Sbjct: 414 YYHRAQLHFI 423


>gi|302502336|ref|XP_003013159.1| hypothetical protein ARB_00704 [Arthroderma benhamiae CBS 112371]
 gi|291176721|gb|EFE32519.1| hypothetical protein ARB_00704 [Arthroderma benhamiae CBS 112371]
          Length = 632

 Score =  134 bits (336), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 102/355 (28%), Positives = 175/355 (49%), Gaps = 21/355 (5%)

Query: 22  PSKQFIKTYLKSFPNDPILQPDGLSNGVELTNGDTNESHELDLLSKAKRAFEHEDYLTAI 81
           PS  F+  YL+SF   P+  P+ L   VEL            LL+ AK     + Y  A 
Sbjct: 271 PSATFVSNYLQSFRPKPV--PEELDESVELKEDSGLGQLRKGLLAVAKST--GDGYDEAA 326

Query: 82  RHCTEEIESTSSNHTKALARLLRATVYIFTSQSTKAIEDLTQLVEDTSVDPKIKVNAHIK 141
           R   + +E       +ALA  +RAT      ++  A+ DL + +E   +DP + V ++IK
Sbjct: 327 RAFEKALELGELGKLEALALNMRATFTYLAGEAAAALTDLNKSIE---LDPSL-VQSYIK 382

Query: 142 RAVVHLHAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALN 201
           RA ++L    +   A  D D A   + +  D YY R Q++ + G+  EA ++  K+I L+
Sbjct: 383 RASLYLEMG-NRESAQDDFDLAVTQNKDDPDIYYHRAQLHFILGELGEAAKDYQKSIDLD 441

Query: 202 PNFHVARAQRHFVVHKMIVPGDRERVEQSLKEFRNFVDTHSNVVEACTLFAQVLVDQEDF 261
            +F  +  Q     +K+        V  ++  F+  +    NV E    + ++L+D + F
Sbjct: 442 RDFIYSHIQLGVTQYKL------GSVASAMATFKRTLKNFENVAEVYNYYGELLLDMQKF 495

Query: 262 DGAEEYFNRSIRVDPENASL------YVHRAMLMLQARGNVDEAIKLIEKAISIDKSCMF 315
             A E F+R++ ++  N          +++A+ + Q + +  EA  L +KA+ ID  C  
Sbjct: 496 SEAIEKFDRAVELEKSNKPWSINVLPLINKALAIFQWKQDFQEAENLCQKALIIDPDCDI 555

Query: 316 AYETLGTIEVQRGRLEEAVKCFNKALPLARDEAELSHIYSLRDAAIAQMKVCERY 370
           A  TL  + +Q+G++ +A+K F +A  LAR EAE+ +  S  +A  AQ++V E+Y
Sbjct: 556 AIATLAQLLLQQGKVSQALKYFERAAELARTEAEVINAVSYAEATRAQLEVQEKY 610



 Score = 42.0 bits (97), Expect = 0.84,   Method: Compositional matrix adjust.
 Identities = 21/70 (30%), Positives = 37/70 (52%), Gaps = 3/70 (4%)

Query: 460 HAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALN---PNF 516
           + A +   A  DL+++ ++DP++  SY +R  +Y   G  E A  + D  +  N   P+ 
Sbjct: 354 YLAGEAAAALTDLNKSIELDPSLVQSYIKRASLYLEMGNRESAQDDFDLAVTQNKDDPDI 413

Query: 517 HVARAQRHFV 526
           +  RAQ HF+
Sbjct: 414 YYHRAQLHFI 423


>gi|326471830|gb|EGD95839.1| import receptor [Trichophyton tonsurans CBS 112818]
          Length = 632

 Score =  134 bits (336), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 101/355 (28%), Positives = 177/355 (49%), Gaps = 21/355 (5%)

Query: 22  PSKQFIKTYLKSFPNDPILQPDGLSNGVELTNGDTNESHELDLLSKAKRAFEHEDYLTAI 81
           PS  F+  YL+SF   P+  P+ L+  VEL            LL+ +K     + Y  A 
Sbjct: 271 PSATFVSNYLQSFRPKPV--PEELNESVELKEDSGLGQLRKGLLAVSKST--GDGYDEAA 326

Query: 82  RHCTEEIESTSSNHTKALARLLRATVYIFTSQSTKAIEDLTQLVEDTSVDPKIKVNAHIK 141
           R   + +E     + +ALA  +RAT      ++  A+ DL + +E   +DP + V ++IK
Sbjct: 327 RAFEKALELGELGNLEALALNMRATFTYLAGEAAAALTDLNKSIE---LDPSL-VQSYIK 382

Query: 142 RAVVHLHAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALN 201
           RA ++L    +   A  D D A   + +  D YY R Q++ + G+  EA ++  K+I L+
Sbjct: 383 RASLYLEMG-NRESAQDDFDLAVTQNKDDPDIYYHRAQLHFILGELGEAAKDYQKSIDLD 441

Query: 202 PNFHVARAQRHFVVHKMIVPGDRERVEQSLKEFRNFVDTHSNVVEACTLFAQVLVDQEDF 261
            +F  +  Q     +K+        V  ++  F+  +    NV E    + ++L+D + F
Sbjct: 442 RDFIYSHIQLGVTQYKL------GSVASAMATFKRTLKNFENVAEVYNYYGELLLDMQKF 495

Query: 262 DGAEEYFNRSIRVDPENASL------YVHRAMLMLQARGNVDEAIKLIEKAISIDKSCMF 315
             A E F+R++ ++  N          +++A+ + Q + +  EA  L +KA+ ID  C  
Sbjct: 496 SEAIEKFDRAVELEKSNKPWSINVLPLINKALAIFQWKQDFQEAENLCQKALIIDPDCDI 555

Query: 316 AYETLGTIEVQRGRLEEAVKCFNKALPLARDEAELSHIYSLRDAAIAQMKVCERY 370
           A  TL  + +Q+G++ +A+K F +A  LAR EAE+ +  S  +A  AQ++V E+Y
Sbjct: 556 AIATLAQLLLQQGKVSQALKYFERAAELARTEAEVINAVSYAEATRAQLEVQEKY 610



 Score = 42.0 bits (97), Expect = 0.76,   Method: Compositional matrix adjust.
 Identities = 21/70 (30%), Positives = 37/70 (52%), Gaps = 3/70 (4%)

Query: 460 HAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALN---PNF 516
           + A +   A  DL+++ ++DP++  SY +R  +Y   G  E A  + D  +  N   P+ 
Sbjct: 354 YLAGEAAAALTDLNKSIELDPSLVQSYIKRASLYLEMGNRESAQDDFDLAVTQNKDDPDI 413

Query: 517 HVARAQRHFV 526
           +  RAQ HF+
Sbjct: 414 YYHRAQLHFI 423


>gi|388854739|emb|CCF51632.1| probable mitochondrial precursor protein import receptor tom70
           [Ustilago hordei]
          Length = 670

 Score =  133 bits (335), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 98/356 (27%), Positives = 177/356 (49%), Gaps = 31/356 (8%)

Query: 22  PSKQFIKTYLKSFPNDP-ILQPDGLSNGVELTNGDTNESHELDLLSKAKRAFEHEDYLTA 80
           PS  F+  YL++F + P    P+  S G E              L KA  A E + Y  A
Sbjct: 325 PSPTFVTAYLEAFRSKPKPTLPENPSQGDET-------------LLKAYGALEAKSYPHA 371

Query: 81  IRHCTEEIESTSSNH-TKALARLLRATVYIFTSQSTKAIEDLTQLVEDTSVDPKIKVNAH 139
           +    E IE   SN   +A A  +R T       + +A+ DL +    TS+ P   V + 
Sbjct: 372 LTLFNEAIEQGLSNEDLEANAYNMRGTFKFVIGNAKEALADLER---STSLQPNY-VQSW 427

Query: 140 IKRAVVHLHAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIA 199
           +K+A VH+   SD  +AF D D A + +P   D YY RGQ+  + G+++ A+++ +K+ +
Sbjct: 428 VKKASVHMEL-SDKEEAFKDFDRAIEANPEDPDIYYHRGQVNFILGEFDSAIKDYEKSTS 486

Query: 200 LNPNFHVARAQRHFVVHKMIVPGDRERVEQSLKEFRNFVDTHSNVVEACTLFAQVLVDQE 259
           L+  F  ++ Q     +K         +  S   FR  +       EA   + ++L+DQ+
Sbjct: 487 LDDTFIFSQVQYAVAHYK------NGNIGHSTAAFRKLLRNFDTSSEAYNYYGELLLDQQ 540

Query: 260 DFDGAEEYFNRSIRVD-----PENASLYVHRAMLMLQARGNVDEAIKLIEKAISIDKSCM 314
            F+ A E F+++I ++       N    +++A+ + Q + ++  A +L  KA+  D+ C 
Sbjct: 541 KFEEAMEKFDKAIEIEGAKSRSTNVLPMINKALALFQWKQDITAAEELCRKALDKDEDCD 600

Query: 315 FAYETLGTIEVQRGRLEEAVKCFNKALPLARDEAELSHIYSLRDAAIAQMKVCERY 370
            A  TL  + +Q+G++++A++ F ++  +AR E EL +  +  +A+ AQ+K  ++Y
Sbjct: 601 VAVATLAQLSLQQGKIQDAIEYFERSAKIARTEPELINALTYENASRAQLKFIQQY 656



 Score = 45.8 bits (107), Expect = 0.065,   Method: Compositional matrix adjust.
 Identities = 20/60 (33%), Positives = 37/60 (61%)

Query: 463 SDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQ 522
           SD  +AF D D A + +P   D YY RGQ+  + G+++ A+++ +K+ +L+  F  ++ Q
Sbjct: 438 SDKEEAFKDFDRAIEANPEDPDIYYHRGQVNFILGEFDSAIKDYEKSTSLDDTFIFSQVQ 497


>gi|326483708|gb|EGE07718.1| import receptor [Trichophyton equinum CBS 127.97]
          Length = 632

 Score =  133 bits (335), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 101/355 (28%), Positives = 176/355 (49%), Gaps = 21/355 (5%)

Query: 22  PSKQFIKTYLKSFPNDPILQPDGLSNGVELTNGDTNESHELDLLSKAKRAFEHEDYLTAI 81
           PS  F+  YL+SF   P+  P+ L+  VEL            LL+ +K     + Y  A 
Sbjct: 271 PSATFVSNYLQSFRPKPV--PEELNESVELKEDSGLGQLRKGLLAVSKST--GDGYDEAA 326

Query: 82  RHCTEEIESTSSNHTKALARLLRATVYIFTSQSTKAIEDLTQLVEDTSVDPKIKVNAHIK 141
           R   + +E       +ALA  +RAT      ++  A+ DL + +E   +DP + V ++IK
Sbjct: 327 RAFEKALELGELGKLEALALNMRATFTYLAGEAAAALTDLNKSIE---LDPSL-VQSYIK 382

Query: 142 RAVVHLHAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALN 201
           RA ++L    +   A  D D A   + +  D YY R Q++ + G+  EA ++  K+I L+
Sbjct: 383 RASLYLEMG-NRESAQDDFDLAVTQNKDDPDIYYHRAQLHFILGELGEAAKDYQKSIDLD 441

Query: 202 PNFHVARAQRHFVVHKMIVPGDRERVEQSLKEFRNFVDTHSNVVEACTLFAQVLVDQEDF 261
            +F  +  Q     +K+        V  ++  F+  +    NV E    + ++L+D + F
Sbjct: 442 RDFIYSHIQLGVTQYKL------GSVASAMATFKRTLKNFENVAEVYNYYGELLLDMQKF 495

Query: 262 DGAEEYFNRSIRVDPENASL------YVHRAMLMLQARGNVDEAIKLIEKAISIDKSCMF 315
             A E F+R++ ++  N          +++A+ + Q + +  EA  L +KA+ ID  C  
Sbjct: 496 SEAIEKFDRAVELEKSNKPWSINVLPLINKALAIFQWKQDFQEAENLCQKALIIDPDCDI 555

Query: 316 AYETLGTIEVQRGRLEEAVKCFNKALPLARDEAELSHIYSLRDAAIAQMKVCERY 370
           A  TL  + +Q+G++ +A+K F +A  LAR EAE+ +  S  +A  AQ++V E+Y
Sbjct: 556 AIATLAQLLLQQGKVSQALKYFERAAELARTEAEVINAVSYAEATRAQLEVQEKY 610



 Score = 42.0 bits (97), Expect = 0.74,   Method: Compositional matrix adjust.
 Identities = 21/70 (30%), Positives = 37/70 (52%), Gaps = 3/70 (4%)

Query: 460 HAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALN---PNF 516
           + A +   A  DL+++ ++DP++  SY +R  +Y   G  E A  + D  +  N   P+ 
Sbjct: 354 YLAGEAAAALTDLNKSIELDPSLVQSYIKRASLYLEMGNRESAQDDFDLAVTQNKDDPDI 413

Query: 517 HVARAQRHFV 526
           +  RAQ HF+
Sbjct: 414 YYHRAQLHFI 423


>gi|315051340|ref|XP_003175044.1| import receptor [Arthroderma gypseum CBS 118893]
 gi|311340359|gb|EFQ99561.1| import receptor [Arthroderma gypseum CBS 118893]
          Length = 632

 Score =  132 bits (333), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 102/355 (28%), Positives = 174/355 (49%), Gaps = 21/355 (5%)

Query: 22  PSKQFIKTYLKSFPNDPILQPDGLSNGVELTNGDTNESHELDLLSKAKRAFEHEDYLTAI 81
           PS  F+  YL+SF   P   P+ L   VEL            LL+ AK     + Y  A 
Sbjct: 271 PSATFVSNYLQSFRPKPT--PEELDESVELKEDSGLGQLRKGLLAVAKST--GDGYDEAA 326

Query: 82  RHCTEEIESTSSNHTKALARLLRATVYIFTSQSTKAIEDLTQLVEDTSVDPKIKVNAHIK 141
           R   + +E       +ALA  +RAT      ++  A+ DL + +E   +DP + V ++IK
Sbjct: 327 RAFEKALELGELGKLEALALNMRATFTYLAGEAAAALTDLNKSIE---LDPSL-VQSYIK 382

Query: 142 RAVVHLHAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALN 201
           RA ++L    +   A  D D A   + +  D YY R Q++ + G+  EA ++  K+I L+
Sbjct: 383 RASLYLEMG-NRESAQDDFDLAVTQNKDDPDIYYHRAQLHFILGELGEAAKDYQKSIDLD 441

Query: 202 PNFHVARAQRHFVVHKMIVPGDRERVEQSLKEFRNFVDTHSNVVEACTLFAQVLVDQEDF 261
            +F  +  Q     +K+        V  ++  F+  +    NV E    + ++L+D + F
Sbjct: 442 RDFIYSHIQLGVTQYKL------GSVASAMATFKRTLKNFENVAEVYNYYGELLLDMQKF 495

Query: 262 DGAEEYFNRSIRVDPENASL------YVHRAMLMLQARGNVDEAIKLIEKAISIDKSCMF 315
             A E F+R++ ++  N          +++A+ + Q + +  EA  L +KA+ ID  C  
Sbjct: 496 SEAIEKFDRAVELEKSNKPWSINVLPLINKALAIFQWKQDFQEAENLCQKALIIDPDCDI 555

Query: 316 AYETLGTIEVQRGRLEEAVKCFNKALPLARDEAELSHIYSLRDAAIAQMKVCERY 370
           A  TL  + +Q+G++ +A+K F +A  LAR EAE+ +  S  +A  AQ++V E+Y
Sbjct: 556 AIATLAQLLLQQGKVSQALKYFERAAELARTEAEVINAVSYAEATRAQLEVQEKY 610



 Score = 42.0 bits (97), Expect = 0.76,   Method: Compositional matrix adjust.
 Identities = 21/70 (30%), Positives = 37/70 (52%), Gaps = 3/70 (4%)

Query: 460 HAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALN---PNF 516
           + A +   A  DL+++ ++DP++  SY +R  +Y   G  E A  + D  +  N   P+ 
Sbjct: 354 YLAGEAAAALTDLNKSIELDPSLVQSYIKRASLYLEMGNRESAQDDFDLAVTQNKDDPDI 413

Query: 517 HVARAQRHFV 526
           +  RAQ HF+
Sbjct: 414 YYHRAQLHFI 423


>gi|380483300|emb|CCF40708.1| mitochondrial import receptor subunit tom-70 [Colletotrichum
           higginsianum]
          Length = 625

 Score =  132 bits (331), Expect = 7e-28,   Method: Compositional matrix adjust.
 Identities = 107/388 (27%), Positives = 190/388 (48%), Gaps = 36/388 (9%)

Query: 8   QHAKEEISKRSFFKPSKQFIKTYLKSFPNDPILQPDGLSNGVELTNGDTNESHELDLLSK 67
           Q A+E ++ R    PS  F+  YL+SF   P+  P GL + V L+        +L L + 
Sbjct: 255 QKAQEMMASRPNKLPSHTFVGNYLQSFRVKPL--PAGLEDSVVLSEETGKGQLQLGLRAL 312

Query: 68  AKRAFEHEDYLTAIRHCTEEIESTSSNHTKALARLLRATVYIFTSQSTKAIEDLTQLVED 127
            K+    + Y  A     + +E       +ALA  LR T      +   A+ DLT+ +E 
Sbjct: 313 EKKT--GDGYEEARAAFEKALELGDLGEFEALAYNLRGTFSCLLGKHDDAMTDLTKSIE- 369

Query: 128 TSVDPKIKVNAHIKRAVVHLH------AASDFTKAFADLDEAEKVDPNVADSYYQRGQIY 181
             +DP +   ++IKRA ++L       A+ DF KA     E    DP++   YY R Q++
Sbjct: 370 --LDPSM-TQSYIKRASMNLELGAPEKASMDFEKAM----EQNSEDPDI---YYHRAQLH 419

Query: 182 CLFGQYEEALRNLDKTIALNPNFHVARAQRHFVVHKMIVPGDRERVEQSLKEFRNFVDTH 241
            + G++ +A ++  K+I L+ +F  +  Q     +KM        +  S+  FR  +   
Sbjct: 420 FIKGEFSDAAKDYQKSIDLDRDFIFSHIQLGVTQYKM------GSIASSMSTFRRCIKNF 473

Query: 242 SNVVEACTLFAQVLVDQEDFDGAEEYFNRSIRVDPENASL------YVHRAMLMLQARGN 295
             V +    + ++L+DQ +F  A E F+ +I ++ +   +       +++A+ + Q + +
Sbjct: 474 KEVPDVYNYYGELLLDQGNFQEAIEKFDSAIDMESKTKPMAMNVLPLINKALTLFQWKQD 533

Query: 296 VDEAIKLIEKAISIDKSCMFAYETLGTIEVQRGRLEEAVKCFNKALPLARDEAELSHIYS 355
             EA KL +KA+ ID  C  A  T+  + +Q+G++ +A+K F +A  LAR E E+ +  S
Sbjct: 534 FGEAEKLCQKALIIDPECDIAVATMAQLLLQQGKVTDALKYFERAAELARTEGEIVNALS 593

Query: 356 LRDAAIAQMKVCERYNIKKKVSPRSQNI 383
             +A   Q++V E+Y    K++ + Q I
Sbjct: 594 YAEATRTQLQVQEKY---PKLAAKLQGI 618


>gi|119497941|ref|XP_001265728.1| mitochondrial outer membrane translocase receptor (TOM70), putative
           [Neosartorya fischeri NRRL 181]
 gi|119413892|gb|EAW23831.1| mitochondrial outer membrane translocase receptor (TOM70), putative
           [Neosartorya fischeri NRRL 181]
          Length = 630

 Score =  131 bits (330), Expect = 7e-28,   Method: Compositional matrix adjust.
 Identities = 100/361 (27%), Positives = 178/361 (49%), Gaps = 33/361 (9%)

Query: 22  PSKQFIKTYLKSFPNDPILQPDGLSNGVELTNGDTNESHELDLLSKAKRAFEHEDYLTAI 81
           PS  F+  YL+SF   P   P+GL    +L+           L++ +K+    + Y  A 
Sbjct: 271 PSPTFVSNYLQSF--RPQSLPEGLDESADLSEESGKGQLRKGLVAMSKKT--GDGYEEAA 326

Query: 82  RHCTEEIESTSSNHTKALARLLRATVYIFTSQSTKAIEDLTQLVEDTSVDPKIKVNAHIK 141
               + +E       +ALA  +RAT       +  A+ DL + +E   + P + V ++IK
Sbjct: 327 GAFEKALELGDLGEYEALALNMRATFTYLEGNAQSALADLNKSIE---LQPSL-VQSYIK 382

Query: 142 RAVVHLH------AASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLD 195
           RA +HL       AA DF  A        K DP++   YY R Q++ + G++ EA ++  
Sbjct: 383 RASLHLELGNKDAAADDFELAITH----NKDDPDI---YYHRAQLHFILGEFAEAAKDYQ 435

Query: 196 KTIALNPNFHVARAQRHFVVHKMIVPGDRERVEQSLKEFRNFVDTHSNVVEACTLFAQVL 255
           K+I L+  F  +  Q     +KM        V  ++  FR  V    +V +    + ++L
Sbjct: 436 KSIDLDRTFIFSHIQLGVTQYKM------GSVASAMATFRRSVKNFEDVPDVYNYYGELL 489

Query: 256 VDQEDFDGAEEYFNRSIRVDPENASL------YVHRAMLMLQARGNVDEAIKLIEKAISI 309
           +DQ++F  A E F++++ ++ ++  +       +++A+ + Q + +  EA  L +KA+ I
Sbjct: 490 LDQQNFSEAIEKFDKAVEMEKQSKPMGINVLPLINKALALFQWKHDFQEAENLCQKALII 549

Query: 310 DKSCMFAYETLGTIEVQRGRLEEAVKCFNKALPLARDEAELSHIYSLRDAAIAQMKVCER 369
           D  C  A  T+  + +Q+G++ +A+K F +A  LAR EAE+ +  S  +A   Q++V ER
Sbjct: 550 DPECDIAVGTMAQLLLQQGKVSQALKYFERAAELARTEAEIVNAISYAEATRTQLEVQER 609

Query: 370 Y 370
           Y
Sbjct: 610 Y 610


>gi|171693707|ref|XP_001911778.1| hypothetical protein [Podospora anserina S mat+]
 gi|170946802|emb|CAP73606.1| unnamed protein product [Podospora anserina S mat+]
          Length = 614

 Score =  131 bits (330), Expect = 8e-28,   Method: Compositional matrix adjust.
 Identities = 105/386 (27%), Positives = 185/386 (47%), Gaps = 28/386 (7%)

Query: 10  AKEEISKRSFFKPSKQFIKTYLKSFPNDPILQPDGLSNGVELTNGDTNESHELDLLSKAK 69
           AKE +  +    PS  F+  YL+SF   P  +P GL +  EL     +E      L K  
Sbjct: 247 AKEILETKPARLPSATFVGNYLQSFRAKP--RPAGLEDDAEL-----DEETGKGQLQKGL 299

Query: 70  RAFEHE---DYLTAIRHCTEEIESTSSNHTKALARLLRATVYIFTSQSTKAIEDLTQLVE 126
           +A E +    Y  A     + +        +A A  LR T      +  +A+ DL++ +E
Sbjct: 300 KAMESKIAPSYEEAAEAFEKALTLGDLGEYEAYAHNLRGTFQCLKGKHQEALADLSKSIE 359

Query: 127 DTSVDPKIKVNAHIKRAVVHLHAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQ 186
              +DP +   ++IKRA ++L   +   KA  D + A   +P   D YY R Q++ + G+
Sbjct: 360 ---LDPGL-TQSYIKRASMNLELGAP-DKAEEDFEAALAKNPEDPDIYYHRAQLHFIKGE 414

Query: 187 YEEALRNLDKTIALNPNFHVARAQRHFVVHKMIVPGDRERVEQSLKEFRNFVDTHSNVVE 246
           + +A ++  K+I L+P+F  +  Q     +K+        +  S+  FR  +     + +
Sbjct: 415 FADAQKDYQKSIDLDPDFIFSHIQLGVTQYKL------GSIASSMATFRRCIKNFPKIPD 468

Query: 247 ACTLFAQVLVDQEDFDGAEEYFNRSIRVDPENASL------YVHRAMLMLQARGNVDEAI 300
               + ++L+DQ  F  A E F+ +I ++ E   +       +++++ + Q + +  EA 
Sbjct: 469 VYNYYGELLLDQTKFSEAIEKFDTAIELEKETKPMSMNVLPLINKSLALFQWKQDFSEAE 528

Query: 301 KLIEKAISIDKSCMFAYETLGTIEVQRGRLEEAVKCFNKALPLARDEAELSHIYSLRDAA 360
           KL EKA+ ID  C  A  T+  + +Q+GR+ EA+K F +A  LAR E EL    S  +A 
Sbjct: 529 KLCEKALIIDPECDIAVATMAQLLLQQGRVTEALKYFERAAELARTEGELVSAISYAEAT 588

Query: 361 IAQMKVCERY-NIKKKVSPRSQNITK 385
             Q++V E+Y ++  K+S     + +
Sbjct: 589 RTQIQVQEKYPDLASKLSGMGGGVVR 614


>gi|145235423|ref|XP_001390360.1| import receptor subunit tom-70 [Aspergillus niger CBS 513.88]
 gi|134058042|emb|CAK38271.1| unnamed protein product [Aspergillus niger]
 gi|350632881|gb|EHA21248.1| hypothetical protein ASPNIDRAFT_213531 [Aspergillus niger ATCC
           1015]
          Length = 629

 Score =  131 bits (330), Expect = 9e-28,   Method: Compositional matrix adjust.
 Identities = 103/361 (28%), Positives = 177/361 (49%), Gaps = 33/361 (9%)

Query: 22  PSKQFIKTYLKSFPNDPILQPDGLSNGVELTNGDTNESHELDLLSKAKRAFEHEDYLTAI 81
           PS  F+  YL+SF   P   P+GL   V+L+           LL+ A +    + Y  A 
Sbjct: 270 PSPTFVSNYLQSF--RPQALPEGLDESVDLSEESGKGQLRKGLLAMALKT--GDGYEEAA 325

Query: 82  RHCTEEIESTSSNHTKALARLLRATVYIFTSQSTKAIEDLTQLVEDTSVDPKIKVNAHIK 141
               + +E       +ALA  LRAT       +  A+ DL + VE   + P + V ++IK
Sbjct: 326 SAFEKALELGDLGEYEALALNLRATFTYLEGNAQAALLDLNKSVE---LQPSL-VQSYIK 381

Query: 142 RAVVHLH------AASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLD 195
           RA +HL       AA DF  A        K DP++   YY R Q++ + G++ EA ++  
Sbjct: 382 RASLHLELGNKDAAADDFELAITH----NKDDPDI---YYHRAQLHFILGEFAEAAKDYQ 434

Query: 196 KTIALNPNFHVARAQRHFVVHKMIVPGDRERVEQSLKEFRNFVDTHSNVVEACTLFAQVL 255
           K+I L+  F  +  Q     +KM        V  ++  FR  V     V +    + ++L
Sbjct: 435 KSIDLDRTFIYSHIQLGVTQYKM------GSVASAMATFRRSVKNFEEVPDVYNYYGELL 488

Query: 256 VDQEDFDGAEEYFNRSIRVDPENASL------YVHRAMLMLQARGNVDEAIKLIEKAISI 309
           +DQ++F  A E F++++ ++ ++  +       +++A+ + Q + +  EA  L +KA+ I
Sbjct: 489 LDQQNFSEAIEKFDKAVEMEKQSKPMGINVLPLINKALALFQWKHDFQEAENLCQKALII 548

Query: 310 DKSCMFAYETLGTIEVQRGRLEEAVKCFNKALPLARDEAELSHIYSLRDAAIAQMKVCER 369
           D  C  A  T+  + +Q+G++ +A+K F +A  LAR EAE+ +  S  +A   Q++V E+
Sbjct: 549 DPECDIAVGTMAQLLLQQGKVSQALKYFERAAELARTEAEIINAISYAEATRTQLEVQEK 608

Query: 370 Y 370
           Y
Sbjct: 609 Y 609


>gi|242822337|ref|XP_002487866.1| mitochondrial outer membrane translocase receptor (TOM70), putative
           [Talaromyces stipitatus ATCC 10500]
 gi|218712787|gb|EED12212.1| mitochondrial outer membrane translocase receptor (TOM70), putative
           [Talaromyces stipitatus ATCC 10500]
          Length = 623

 Score =  131 bits (329), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 103/364 (28%), Positives = 176/364 (48%), Gaps = 40/364 (10%)

Query: 22  PSKQFIKTYLKSFPNDPILQPDGLSNGVELTNGDTNESHELDLLSKAKRAFEH---EDYL 78
           P   F+  YL+SF   PI  P GL +       D +E      L K   A E    E Y 
Sbjct: 265 PGATFVGNYLQSFRPKPI--PAGLDSE------DLDEETGKGQLRKGYLALEKKTAEGYD 316

Query: 79  TAIRHCTEEIESTSSNHTKALARLLRATVYIFTSQSTKAIEDLTQLVEDTSVDPKIKVNA 138
            A +   + +E       +  A  +RAT       +  A+EDL + ++   V P +   +
Sbjct: 317 EASQAFGKALELGDLGEYEGDALNMRATFTYLQGNAQGALEDLNKSIQ---VQPAL-TQS 372

Query: 139 HIKRAVVHLH------AASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALR 192
           +IKRA +HL       A  DF  A A      K DP++   YY R Q++ + G++ EA +
Sbjct: 373 YIKRASLHLELGNKEGAVDDFELAIAH----NKDDPDI---YYHRAQLHFILGEFAEAAK 425

Query: 193 NLDKTIALNPNFHVARAQRHFVVHKMIVPGDRERVEQSLKEFRNFVDTHSNVVEACTLFA 252
           +  K+I L+P+F  +  Q     +K+        V  ++  F+  V    NV +    + 
Sbjct: 426 DYQKSIDLDPSFIYSHIQLGVTQYKL------GSVASAMATFKRSVKKFENVPDVYNYYG 479

Query: 253 QVLVDQEDFDGAEEYFNRSIRVDPE------NASLYVHRAMLMLQARGNVDEAIKLIEKA 306
           ++L+DQ+D+ GA E F++++ ++ +      N    +++A+ + Q + +  EA  L +KA
Sbjct: 480 ELLLDQQDYQGAIEKFDKAVEMESKIKPTAINVLPLINKALGIFQWKQDFKEAESLCQKA 539

Query: 307 ISIDKSCMFAYETLGTIEVQRGRLEEAVKCFNKALPLARDEAELSHIYSLRDAAIAQMKV 366
           + ID  C  A  T+  + +Q+G++ EA+K F +A  LAR E E+ +  S  +A   Q++V
Sbjct: 540 LIIDPECDIAVGTMAQLLLQQGKVAEALKYFTRAAELARTEGEVINAISYAEATRTQLEV 599

Query: 367 CERY 370
            E+Y
Sbjct: 600 QEKY 603



 Score = 38.5 bits (88), Expect = 8.7,   Method: Compositional matrix adjust.
 Identities = 28/94 (29%), Positives = 45/94 (47%), Gaps = 11/94 (11%)

Query: 448 KYGNLENESGQKHAA-SDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNL 506
           K  +L  E G K  A  DF  A A      K DP++   YY R Q++ + G++ EA ++ 
Sbjct: 375 KRASLHLELGNKEGAVDDFELAIAH----NKDDPDI---YYHRAQLHFILGEFAEAAKDY 427

Query: 507 DKTIALNPNF---HVARAQRHFVWTSTLAELMAF 537
            K+I L+P+F   H+      +   S  + +  F
Sbjct: 428 QKSIDLDPSFIYSHIQLGVTQYKLGSVASAMATF 461


>gi|358374670|dbj|GAA91260.1| mitochondrial precursor proteins import receptor [Aspergillus
           kawachii IFO 4308]
          Length = 629

 Score =  130 bits (328), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 102/361 (28%), Positives = 177/361 (49%), Gaps = 33/361 (9%)

Query: 22  PSKQFIKTYLKSFPNDPILQPDGLSNGVELTNGDTNESHELDLLSKAKRAFEHEDYLTAI 81
           PS  F+  YL+SF   P   P+GL    +L++          LL+ A +    + Y  A 
Sbjct: 270 PSPTFVSNYLQSF--RPQALPEGLDESADLSDDSGKGQLRKGLLAMALKT--GDGYEEAA 325

Query: 82  RHCTEEIESTSSNHTKALARLLRATVYIFTSQSTKAIEDLTQLVEDTSVDPKIKVNAHIK 141
               + +E       +ALA  LRAT       +  A+ DL + VE   + P + V ++IK
Sbjct: 326 SAFEKALELGDLGEYEALALNLRATFTYLEGNAQAALLDLNKSVE---LQPSL-VQSYIK 381

Query: 142 RAVVHLH------AASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLD 195
           RA +HL       AA DF  A        K DP++   YY R Q++ + G++ EA ++  
Sbjct: 382 RASLHLELGNKDAAADDFELAITH----NKDDPDI---YYHRAQLHFILGEFAEAAKDYQ 434

Query: 196 KTIALNPNFHVARAQRHFVVHKMIVPGDRERVEQSLKEFRNFVDTHSNVVEACTLFAQVL 255
           K+I L+  F  +  Q     +KM        V  ++  FR  V     V +    + ++L
Sbjct: 435 KSIDLDRTFIYSHIQLGVTQYKM------GSVASAMATFRRSVKNFEEVPDVYNYYGELL 488

Query: 256 VDQEDFDGAEEYFNRSIRVDPENASL------YVHRAMLMLQARGNVDEAIKLIEKAISI 309
           +DQ++F  A E F++++ ++ ++  +       +++A+ + Q + +  EA  L +KA+ I
Sbjct: 489 LDQQNFSEAIEKFDKAVEMEKQSKPMGINVLPLINKALALFQWKHDFQEAENLCQKALII 548

Query: 310 DKSCMFAYETLGTIEVQRGRLEEAVKCFNKALPLARDEAELSHIYSLRDAAIAQMKVCER 369
           D  C  A  T+  + +Q+G++ +A+K F +A  LAR EAE+ +  S  +A   Q++V E+
Sbjct: 549 DPECDIAVGTMAQLLLQQGKVSQALKYFERAAELARTEAEIINAISYAEATRTQLEVQEK 608

Query: 370 Y 370
           Y
Sbjct: 609 Y 609


>gi|343427381|emb|CBQ70908.1| probable mitochondrial precursor protein import receptor tom70
           [Sporisorium reilianum SRZ2]
          Length = 666

 Score =  130 bits (328), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 99/357 (27%), Positives = 177/357 (49%), Gaps = 33/357 (9%)

Query: 22  PSKQFIKTYLKSF--PNDPILQPDGLSNGVELTNGDTNESHELDLLSKAKRAFEHEDYLT 79
           PS  F+  YL++F   + P L P+  S G E              L KA  A E + Y  
Sbjct: 321 PSPTFVTAYLEAFRAKSKPTL-PEQPSQGDET-------------LLKAYGALEAKSYPH 366

Query: 80  AIRHCTEEIESTSSNH-TKALARLLRATVYIFTSQSTKAIEDLTQLVEDTSVDPKIKVNA 138
           A     E IE   SN   +A A  +R T       + +A+ DL +    TS+ PK  V +
Sbjct: 367 AFTLFNEAIEQGLSNEDLEANAYNMRGTFKFVIGNAKEALSDLER---STSLRPKY-VQS 422

Query: 139 HIKRAVVHLHAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTI 198
            +K+A VH+   SD   AF D D+A + D   AD YY RGQ+  + G+++ A+++ +K+ 
Sbjct: 423 WVKKASVHMEL-SDKDAAFQDFDKAIEADAQDADIYYHRGQVNFILGEFDAAIKDYEKST 481

Query: 199 ALNPNFHVARAQRHFVVHKMIVPGDRERVEQSLKEFRNFVDTHSNVVEACTLFAQVLVDQ 258
           +L+  F  ++ Q     +K         +  S   FR  +       EA   + ++L+DQ
Sbjct: 482 SLDDTFIFSQVQYAVAHYK------NGNIGHSTAAFRKLLSNFDTSSEAYNYYGELLLDQ 535

Query: 259 EDFDGAEEYFNRSIRVD-----PENASLYVHRAMLMLQARGNVDEAIKLIEKAISIDKSC 313
           + F+ A + F+++I ++       N    +++A+ + Q + ++  A +L  +A++ D+ C
Sbjct: 536 QKFEEAMDKFDKAIEIENAKSGSTNVLPMINKALALFQWKQDIGAAEELCRQALTKDEDC 595

Query: 314 MFAYETLGTIEVQRGRLEEAVKCFNKALPLARDEAELSHIYSLRDAAIAQMKVCERY 370
             A  TL  + +Q+G++++A+  F ++  +AR E EL +  +  +A+ AQ+K  + Y
Sbjct: 596 DVAVATLAQLSLQQGKIQDAIDYFERSAKIARTEPELINALTYENASRAQLKFIQEY 652



 Score = 45.4 bits (106), Expect = 0.070,   Method: Compositional matrix adjust.
 Identities = 21/60 (35%), Positives = 37/60 (61%)

Query: 463 SDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQ 522
           SD   AF D D+A + D   AD YY RGQ+  + G+++ A+++ +K+ +L+  F  ++ Q
Sbjct: 434 SDKDAAFQDFDKAIEADAQDADIYYHRGQVNFILGEFDAAIKDYEKSTSLDDTFIFSQVQ 493


>gi|2407970|emb|CAA75047.1| TOM70 [Podospora anserina]
          Length = 614

 Score =  130 bits (328), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 105/386 (27%), Positives = 185/386 (47%), Gaps = 28/386 (7%)

Query: 10  AKEEISKRSFFKPSKQFIKTYLKSFPNDPILQPDGLSNGVELTNGDTNESHELDLLSKAK 69
           AKE +  +    PS  F+  YL+SF   P  +P GL +  EL     +E      L K  
Sbjct: 247 AKEILETKPARLPSATFVGNYLQSFRAKP--RPAGLEDDAEL-----DEETGKGQLQKGL 299

Query: 70  RAFEHE---DYLTAIRHCTEEIESTSSNHTKALARLLRATVYIFTSQSTKAIEDLTQLVE 126
           +A E +    Y  A     + +        +A A  LR T      +  +A+ DL++ +E
Sbjct: 300 KAMESKIAPWYEEAAEAFEKALTLGDLGEYEAYAHNLRGTFQCLKGKHQEALADLSKSIE 359

Query: 127 DTSVDPKIKVNAHIKRAVVHLHAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQ 186
              +DP +   ++IKRA ++L   +   KA  D + A   +P   D YY R Q++ + G+
Sbjct: 360 ---LDPGL-TQSYIKRASMNLELGAP-DKAEEDFEAALAKNPEDPDIYYHRAQLHFIKGE 414

Query: 187 YEEALRNLDKTIALNPNFHVARAQRHFVVHKMIVPGDRERVEQSLKEFRNFVDTHSNVVE 246
           + +A ++  K+I L+P+F  +  Q     +K+        +  S+  FR  +     + +
Sbjct: 415 FADAQKDYQKSIDLDPDFIFSHIQLGVTQYKL------GSIASSMATFRRCIKNFPKIPD 468

Query: 247 ACTLFAQVLVDQEDFDGAEEYFNRSIRVDPENASL------YVHRAMLMLQARGNVDEAI 300
               + ++L+DQ  F  A E F+ +I ++ E   +       +++++ + Q + +  EA 
Sbjct: 469 VYNYYGELLLDQTKFSEAIEKFDTAIELEKETKPMSMNVLPLINKSLALFQWKQDFSEAE 528

Query: 301 KLIEKAISIDKSCMFAYETLGTIEVQRGRLEEAVKCFNKALPLARDEAELSHIYSLRDAA 360
           KL EKA+ ID  C  A  T+  + +Q+GR+ EA+K F +A  LAR E EL    S  +A 
Sbjct: 529 KLCEKALIIDPECDIAVATMAQLLLQQGRVTEALKYFERAAELARTEGELVSAISYAEAT 588

Query: 361 IAQMKVCERY-NIKKKVSPRSQNITK 385
             Q++V E+Y ++  K+S     + +
Sbjct: 589 RTQIQVQEKYPDLASKLSGMGGGVVR 614


>gi|310800154|gb|EFQ35047.1| import receptor [Glomerella graminicola M1.001]
          Length = 624

 Score =  130 bits (327), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 109/388 (28%), Positives = 191/388 (49%), Gaps = 36/388 (9%)

Query: 8   QHAKEEISKRSFFKPSKQFIKTYLKSFPNDPILQPDGLSNGVELTNGDTNESHELDLLSK 67
           Q A+E ++ R    PS  F+  YL+SF   P  +P GL +   L+  DT +  +L L  +
Sbjct: 254 QKAQEMMADRPSKLPSHTFVGNYLQSFRVKP--RPAGLEDSAILSE-DTGKG-QLQLGLR 309

Query: 68  AKRAFEHEDYLTAIRHCTEEIESTSSNHTKALARLLRATVYIFTSQSTKAIEDLTQLVED 127
           A      + Y  A     + +E       +ALA  LR T      +   A+ DL++ +E 
Sbjct: 310 ALEKKTGDGYEEARAAFEKALELGELGEFEALAYNLRGTFSCLLGKHDDAMADLSKSIE- 368

Query: 128 TSVDPKIKVNAHIKRAVVHLH------AASDFTKAFADLDEAEKVDPNVADSYYQRGQIY 181
             +DP +   ++IKRA ++L       AA DF KA     E    DP++   YY R Q++
Sbjct: 369 --LDPSM-TQSYIKRASMNLELGAPEKAAEDFEKAM----EHNSEDPDI---YYHRAQLH 418

Query: 182 CLFGQYEEALRNLDKTIALNPNFHVARAQRHFVVHKMIVPGDRERVEQSLKEFRNFVDTH 241
            + G++ +A ++  K+I L+ +F  +  Q     +KM        +  S+  FR  +   
Sbjct: 419 FIKGEFSDAAKDYQKSIDLDRDFIFSHIQLGVTQYKM------GSIASSMSTFRRCIKNF 472

Query: 242 SNVVEACTLFAQVLVDQEDFDGAEEYFNRSIRVDPENASL------YVHRAMLMLQARGN 295
             V +    + ++L+DQ +F  A E F+ +I ++ +   +       +++A+ + Q + +
Sbjct: 473 KEVPDVYNYYGELLLDQGNFQEAIEKFDSAIDMESKTKPMAMNVLPLINKALTLFQWKQD 532

Query: 296 VDEAIKLIEKAISIDKSCMFAYETLGTIEVQRGRLEEAVKCFNKALPLARDEAELSHIYS 355
             EA KL +KA+ ID  C  A  T+  + +Q+G++ EA+K F +A  LAR E E+ +  S
Sbjct: 533 FGEAEKLCQKALIIDPECDIAVATMAQLLLQQGKVTEALKYFERAAELARTEGEIVNALS 592

Query: 356 LRDAAIAQMKVCERYNIKKKVSPRSQNI 383
             +A   Q++V E+Y    K++ + Q I
Sbjct: 593 YAEATRTQLQVQEKY---PKLAAKLQGI 617



 Score = 38.9 bits (89), Expect = 8.0,   Method: Compositional matrix adjust.
 Identities = 20/62 (32%), Positives = 35/62 (56%), Gaps = 3/62 (4%)

Query: 468 AFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALN---PNFHVARAQRH 524
           A ADL ++ ++DP++  SY +R  +    G  E+A  + +K +  N   P+ +  RAQ H
Sbjct: 359 AMADLSKSIELDPSMTQSYIKRASMNLELGAPEKAAEDFEKAMEHNSEDPDIYYHRAQLH 418

Query: 525 FV 526
           F+
Sbjct: 419 FI 420


>gi|71023563|ref|XP_762011.1| hypothetical protein UM05864.1 [Ustilago maydis 521]
 gi|46101576|gb|EAK86809.1| hypothetical protein UM05864.1 [Ustilago maydis 521]
          Length = 706

 Score =  130 bits (327), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 99/356 (27%), Positives = 174/356 (48%), Gaps = 31/356 (8%)

Query: 22  PSKQFIKTYLKSFPNDPILQ-PDGLSNGVELTNGDTNESHELDLLSKAKRAFEHEDYLTA 80
           PS  F+  YL++F   P    P+  S G E              L KA  A E + Y  A
Sbjct: 361 PSPTFVTAYLEAFRAKPKPSLPEKPSQGDET-------------LLKAYDALEAKSYPHA 407

Query: 81  IRHCTEEIESTSSNH-TKALARLLRATVYIFTSQSTKAIEDLTQLVEDTSVDPKIKVNAH 139
               +E IE   SN   +A A  +R T       + +A+ DL +    TS+ PK  V + 
Sbjct: 408 FTLFSEAIEQGLSNQDLEANAYNMRGTFKFVIGNAKEALADLER---STSLRPKY-VQSW 463

Query: 140 IKRAVVHLHAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIA 199
           +K+A VH+   SD   AF D D+A + D    D YY RGQ+  + G++E A+++ +K+ +
Sbjct: 464 VKKASVHMEL-SDKEAAFKDFDKAIEADAEDPDIYYHRGQVNFILGEFEAAIKDYEKSTS 522

Query: 200 LNPNFHVARAQRHFVVHKMIVPGDRERVEQSLKEFRNFVDTHSNVVEACTLFAQVLVDQE 259
           L+  F  ++ Q     +K         +  S   FR  +       EA   + ++L+DQ+
Sbjct: 523 LDDTFIFSQVQYAVAHYK------NNNIGHSTAAFRKLLRNFDTSSEAYNYYGELLLDQQ 576

Query: 260 DFDGAEEYFNRSIRVDPE-----NASLYVHRAMLMLQARGNVDEAIKLIEKAISIDKSCM 314
            F+ A + F+++I ++       N    +++A+ + Q + ++  A +L  KA+  D  C 
Sbjct: 577 KFEEAMDKFDKAIEIEASKSGSTNVLPMINKALALFQWKQDIGAAEELCRKALEKDADCD 636

Query: 315 FAYETLGTIEVQRGRLEEAVKCFNKALPLARDEAELSHIYSLRDAAIAQMKVCERY 370
            A  TL  + +Q+G++++A++ F ++  +AR E EL +  +  +A+ AQ+K  + Y
Sbjct: 637 VAVATLAQLSLQQGKIQDAIQYFERSAKIARTEPELINALTYENASRAQLKFIQEY 692



 Score = 45.1 bits (105), Expect = 0.11,   Method: Compositional matrix adjust.
 Identities = 21/60 (35%), Positives = 36/60 (60%)

Query: 463 SDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQ 522
           SD   AF D D+A + D    D YY RGQ+  + G++E A+++ +K+ +L+  F  ++ Q
Sbjct: 474 SDKEAAFKDFDKAIEADAEDPDIYYHRGQVNFILGEFEAAIKDYEKSTSLDDTFIFSQVQ 533


>gi|302422306|ref|XP_003008983.1| mitochondrial precursor proteins import receptor [Verticillium
           albo-atrum VaMs.102]
 gi|261352129|gb|EEY14557.1| mitochondrial precursor proteins import receptor [Verticillium
           albo-atrum VaMs.102]
          Length = 622

 Score =  130 bits (326), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 108/388 (27%), Positives = 188/388 (48%), Gaps = 36/388 (9%)

Query: 8   QHAKEEISKRSFFKPSKQFIKTYLKSFPNDPILQPDGLSNGVELTNGDTNESHELDLLSK 67
           Q A E ++ R    PS  F+  YL+SF      +P GL + +EL   +   + +L L  K
Sbjct: 253 QKASEMMANRPVKLPSHTFVGNYLQSFRVKS--RPAGLEDSIELP--EETGAGQLQLGLK 308

Query: 68  AKRAFEHEDYLTAIRHCTEEIESTSSNHTKALARLLRATVYIFTSQSTKAIEDLTQLVED 127
           A      + Y  A     + +E       +ALA  +R T      +   A+ DLT+ +E 
Sbjct: 309 AMEKKTGDGYEEARAAFDKALELGDLGDHEALAYNMRGTFRCLLGKHDDAMADLTKSIE- 367

Query: 128 TSVDPKIKVNAHIKRAVVHLH------AASDFTKAFADLDEAEKVDPNVADSYYQRGQIY 181
             +DP +   ++IKRA ++L       AA DF KA     E    DP++   YY R Q++
Sbjct: 368 --LDPSL-TQSYIKRASMNLELGAPEKAAEDFEKAL----EQNADDPDI---YYHRAQLH 417

Query: 182 CLFGQYEEALRNLDKTIALNPNFHVARAQRHFVVHKMIVPGDRERVEQSLKEFRNFVDTH 241
            + G++ +A ++  K+I L+ +F  +  Q     +KM        +  S+  FR  +   
Sbjct: 418 FIKGEFSDAAKDYQKSIDLDRDFIFSHIQLGVTQYKM------GSIASSMSIFRRCIKNF 471

Query: 242 SNVVEACTLFAQVLVDQEDFDGAEEYFNRSIRVDPENASL------YVHRAMLMLQARGN 295
             V +    + ++L+DQ +F  A E F+ +I ++ +   +       +++A+ + Q + +
Sbjct: 472 KEVPDVYNYYGELLLDQGNFQEAVEKFDTAIEMEKKTKPMAMNVLPLINKALCLFQQKQD 531

Query: 296 VDEAIKLIEKAISIDKSCMFAYETLGTIEVQRGRLEEAVKCFNKALPLARDEAELSHIYS 355
             EA KL +KA+ ID  C  A  T+  + +Q+G++ EA+K F +A  LAR E E  +  S
Sbjct: 532 FTEAEKLCQKALIIDPECDIAVATMAQLLLQQGKVTEALKYFERAAELARTEGETVNALS 591

Query: 356 LRDAAIAQMKVCERYNIKKKVSPRSQNI 383
             +A   Q++V E+Y    K++ R Q +
Sbjct: 592 YAEATRTQLQVQEKY---PKLAARLQGM 616



 Score = 38.9 bits (89), Expect = 7.2,   Method: Compositional matrix adjust.
 Identities = 20/62 (32%), Positives = 35/62 (56%), Gaps = 3/62 (4%)

Query: 468 AFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALN---PNFHVARAQRH 524
           A ADL ++ ++DP++  SY +R  +    G  E+A  + +K +  N   P+ +  RAQ H
Sbjct: 358 AMADLTKSIELDPSLTQSYIKRASMNLELGAPEKAAEDFEKALEQNADDPDIYYHRAQLH 417

Query: 525 FV 526
           F+
Sbjct: 418 FI 419


>gi|346970145|gb|EGY13597.1| import receptor [Verticillium dahliae VdLs.17]
          Length = 622

 Score =  130 bits (326), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 108/388 (27%), Positives = 188/388 (48%), Gaps = 36/388 (9%)

Query: 8   QHAKEEISKRSFFKPSKQFIKTYLKSFPNDPILQPDGLSNGVELTNGDTNESHELDLLSK 67
           Q A E ++ R    PS  F+  YL+SF      +P GL + +EL+  +     +L L  K
Sbjct: 253 QKASEMMANRPVKLPSHTFVGNYLQSFRVKS--RPAGLEDSIELS--EETGVGQLQLGLK 308

Query: 68  AKRAFEHEDYLTAIRHCTEEIESTSSNHTKALARLLRATVYIFTSQSTKAIEDLTQLVED 127
           A      + Y  A     + +E       +ALA  +R T      +   A+ DLT+ +E 
Sbjct: 309 AMEKKTGDGYEEARAAFDKALELGDLGDHEALAYNMRGTFRCLLGKHDDAMADLTKSIE- 367

Query: 128 TSVDPKIKVNAHIKRAVVHLH------AASDFTKAFADLDEAEKVDPNVADSYYQRGQIY 181
             +DP +   ++IKRA ++L       AA DF KA     E    DP++   YY R Q++
Sbjct: 368 --LDPSL-TQSYIKRASMNLELGAPEKAAEDFEKAL----EQNADDPDI---YYHRAQLH 417

Query: 182 CLFGQYEEALRNLDKTIALNPNFHVARAQRHFVVHKMIVPGDRERVEQSLKEFRNFVDTH 241
            + G++ +A ++  K+I L+ +F  +  Q     +KM        +  S+  FR  +   
Sbjct: 418 FIKGEFSDAAKDYQKSIDLDRDFIFSHIQLGVTQYKM------GSIASSMSIFRRCIKNF 471

Query: 242 SNVVEACTLFAQVLVDQEDFDGAEEYFNRSIRVDPENASL------YVHRAMLMLQARGN 295
             V +    + ++L+DQ +F  A E F+ +I ++ +   +       +++A+ + Q + +
Sbjct: 472 KEVPDVYNYYGELLLDQGNFQEAVEKFDTAIEMEKKTKPMAMNVLPLINKALCLFQQKQD 531

Query: 296 VDEAIKLIEKAISIDKSCMFAYETLGTIEVQRGRLEEAVKCFNKALPLARDEAELSHIYS 355
             EA KL +KA+ ID  C  A  T+  + +Q+G++ EA+K F +A  LAR E E  +  S
Sbjct: 532 FTEAEKLCQKALIIDPECDIAVATMAQLLLQQGKVTEALKYFERAAELARTEGETVNALS 591

Query: 356 LRDAAIAQMKVCERYNIKKKVSPRSQNI 383
             +A   Q++V E+Y    K++ R Q +
Sbjct: 592 YAEATRTQLQVQEKY---PKLAARLQGM 616



 Score = 38.9 bits (89), Expect = 6.4,   Method: Compositional matrix adjust.
 Identities = 20/62 (32%), Positives = 35/62 (56%), Gaps = 3/62 (4%)

Query: 468 AFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALN---PNFHVARAQRH 524
           A ADL ++ ++DP++  SY +R  +    G  E+A  + +K +  N   P+ +  RAQ H
Sbjct: 358 AMADLTKSIELDPSLTQSYIKRASMNLELGAPEKAAEDFEKALEQNADDPDIYYHRAQLH 417

Query: 525 FV 526
           F+
Sbjct: 418 FI 419


>gi|336263132|ref|XP_003346347.1| hypothetical protein SMAC_07824 [Sordaria macrospora k-hell]
 gi|380091675|emb|CCC10807.1| unnamed protein product [Sordaria macrospora k-hell]
          Length = 624

 Score =  129 bits (325), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 106/374 (28%), Positives = 185/374 (49%), Gaps = 35/374 (9%)

Query: 10  AKEEISKRSFFKPSKQFIKTYLKSFPNDPILQPDGLSNGVELTNGDTNESHELDLLS-KA 68
           AKE +  +    PS  F+  YL+SF + P  +P+GL + VEL+        +L L   ++
Sbjct: 256 AKEILETKPPKLPSSTFVGNYLQSFRSKP--RPEGLEDSVELSEETGLGQMQLGLKHLES 313

Query: 69  KRAFEHEDYLTAIRHCTEEIESTSSNHTKALARLLRATVYIFTSQSTKAIEDLTQLVEDT 128
           K    +E+   A +   +  E  +    +ALA  LR T +    +  +A+ DL++ +E  
Sbjct: 314 KTGTGYEEASAAFKKALDLGELGAH---EALAYNLRGTFHCLMGKHEEALADLSKSIE-- 368

Query: 129 SVDPKIKVNAHIKRAVVHLH------AASDFTKAFADLDEAEKVDPNVADSYYQRGQIYC 182
            +DP +   ++IKRA ++L       A  DF KA     E    DP++   YY R Q++ 
Sbjct: 369 -LDPAM-TQSYIKRASMNLELGHPDKAEEDFNKAI----EQNAEDPDI---YYHRAQLHF 419

Query: 183 LFGQYEEALRNLDKTIALNPNFHVARAQRHFVVHKMIVPGDRERVEQSLKEFRNFVDTHS 242
           + G++ EA ++  K+I L+ +F  +  Q     +KM        +  S+  FR  +    
Sbjct: 420 IKGEFAEAAKDYQKSIDLDSDFIFSHIQLGVTQYKM------GSIASSMATFRRCMKNFD 473

Query: 243 NVVEACTLFAQVLVDQEDFDGAEEYFNRSIRVDPENASL------YVHRAMLMLQARGNV 296
              +    + ++L+DQ  F  A E F+ +I ++ E   +       +++A+ + Q + + 
Sbjct: 474 QTPDVYNYYGELLLDQNKFQEAIEKFDTAIALEKETKPMCMNVLPLINKALALFQWKQDY 533

Query: 297 DEAIKLIEKAISIDKSCMFAYETLGTIEVQRGRLEEAVKCFNKALPLARDEAELSHIYSL 356
            EA +L EKA+ ID  C  A  T+  + +Q+G++ EA+K F +A  LAR E EL +  S 
Sbjct: 534 AEAEQLCEKALIIDPECDIAVATMAQLLLQQGKVVEALKFFERAAELARTEGELVNALSY 593

Query: 357 RDAAIAQMKVCERY 370
            +A   Q++V E Y
Sbjct: 594 AEATRTQIQVQENY 607



 Score = 42.0 bits (97), Expect = 0.92,   Method: Compositional matrix adjust.
 Identities = 24/59 (40%), Positives = 37/59 (62%), Gaps = 4/59 (6%)

Query: 456 SGQKHAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNP 514
           +G + A++ F KA  DL E   +  + A +Y  RG  +CL G++EEAL +L K+I L+P
Sbjct: 317 TGYEEASAAFKKAL-DLGE---LGAHEALAYNLRGTFHCLMGKHEEALADLSKSIELDP 371


>gi|400597181|gb|EJP64916.1| import receptor [Beauveria bassiana ARSEF 2860]
          Length = 621

 Score =  129 bits (324), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 107/369 (28%), Positives = 173/369 (46%), Gaps = 25/369 (6%)

Query: 10  AKEEISKRSFFKPSKQFIKTYLKSFPNDPILQPDGLSNGVELT--NGDTNESHELDLLSK 67
           AKE +S RS   PS  F+  YL+SF   P  +P GL +  EL+   G     H L  L K
Sbjct: 250 AKEMMSSRSPKLPSPIFVGNYLQSFRPKP--RPAGLEDSAELSLDTGLGQLQHGLQGLEK 307

Query: 68  AKRAFEHEDYLTAIRHCTEEIESTSSNHTKALARLLRATVYIFTSQSTKAIEDLTQLVED 127
                  E Y  A     + IE       +ALA   R T+       + A ED  + +E 
Sbjct: 308 RT----SEGYEEARLAFEKAIELGDLGDNEALAYNCRGTMRTLLGDHSAATEDFDKSIE- 362

Query: 128 TSVDPKIKVNAHIKRAVVHLHAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQY 187
             +DP +   ++IK A + L    +  +A  +  EA K DPN  D YY R Q   + G  
Sbjct: 363 --LDPTM-TQSYIKHASISLELG-ETAEADREFAEALKQDPNDPDVYYHRAQANFIRGDL 418

Query: 188 EEALRNLDKTIALNPNFHVARAQRHFVVHKMIVPGDRERVEQSLKEFRNFVDTHSNVVEA 247
            EA ++  K+I L+ +F  +  Q     +KM        +  S+  FR  +     V + 
Sbjct: 419 SEAQKDYQKSIDLDKDFIFSHIQLGVTQYKM------GSIASSMATFRRCIKNFPKVPDV 472

Query: 248 CTLFAQVLVDQEDFDGAEEYFNRSIRVDPENASL------YVHRAMLMLQARGNVDEAIK 301
              + ++L+DQ +F  A E F+ ++ ++ +   +       +++A+ + Q + +  EA  
Sbjct: 473 YNYYGELLLDQGNFSEAVEKFDTAVEMEKQTKPMSMNVLPLINKALALFQWKQDFKEAEN 532

Query: 302 LIEKAISIDKSCMFAYETLGTIEVQRGRLEEAVKCFNKALPLARDEAELSHIYSLRDAAI 361
           L EKA+ ID  C  A  T+  + +Q+ ++ +A+K F +A  LAR E E+ +  S  +A  
Sbjct: 533 LCEKALIIDPECDIAVATMAQLLLQQNQVAKALKYFERAAELARTEGEIVNALSYAEATR 592

Query: 362 AQMKVCERY 370
            Q+KV E+Y
Sbjct: 593 TQVKVTEKY 601


>gi|115433392|ref|XP_001216833.1| mitochondrial precursor proteins import receptor [Aspergillus
           terreus NIH2624]
 gi|114189685|gb|EAU31385.1| mitochondrial precursor proteins import receptor [Aspergillus
           terreus NIH2624]
          Length = 630

 Score =  129 bits (324), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 99/361 (27%), Positives = 177/361 (49%), Gaps = 33/361 (9%)

Query: 22  PSKQFIKTYLKSFPNDPILQPDGLSNGVELTNGDTNESHELDLLSKAKRAFEHEDYLTAI 81
           PS  F+  YL+SF   P   P+GL    +++           L+  AK+    + Y  A 
Sbjct: 271 PSPTFVSNYLQSF--RPQALPEGLEESADISEESGKGQLRKGLIEMAKKT--GDGYEAAA 326

Query: 82  RHCTEEIESTSSNHTKALARLLRATVYIFTSQSTKAIEDLTQLVEDTSVDPKIKVNAHIK 141
               + +E       +ALA  +RAT       +  A+ DL + VE   + P + V ++IK
Sbjct: 327 AAFEKSLELGDLGDFEALALNMRATFTYLEGNAQAALADLNKSVE---LQPSL-VQSYIK 382

Query: 142 RAVVHLH------AASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLD 195
           RA +HL       A  DF  A +      K DP++   YY R Q++ + G++ EA ++  
Sbjct: 383 RASLHLELGNKDAAGDDFELAISH----NKDDPDI---YYHRAQLHFILGEFAEAAKDYQ 435

Query: 196 KTIALNPNFHVARAQRHFVVHKMIVPGDRERVEQSLKEFRNFVDTHSNVVEACTLFAQVL 255
           K+I L+ +F  +  Q     +KM        V  ++  FR  V    +V +    + ++L
Sbjct: 436 KSIDLDRSFIFSHIQLGVTQYKM------GSVASAMATFRRSVKNFEDVPDVYNYYGELL 489

Query: 256 VDQEDFDGAEEYFNRSIRVDPENASL------YVHRAMLMLQARGNVDEAIKLIEKAISI 309
           +DQ +F  A E F++++ ++ ++  +       +++A+ + Q + +  EA  L +KA+ I
Sbjct: 490 LDQSNFAEAIEKFDKAVEMEKQSKPMGINVLPLINKALALFQWKHDFQEAENLCQKALII 549

Query: 310 DKSCMFAYETLGTIEVQRGRLEEAVKCFNKALPLARDEAELSHIYSLRDAAIAQMKVCER 369
           D  C  A  T+  + +Q+G++ +A+K F +A  LAR EAE+ +  S  +A   Q++V E+
Sbjct: 550 DPECDIAVGTMAQLLLQQGKVSQALKYFERAAELARTEAEIVNAISYAEATRTQLEVQEK 609

Query: 370 Y 370
           Y
Sbjct: 610 Y 610


>gi|85101921|ref|XP_961236.1| mitochondrial precursor protein import receptor tom70 [Neurospora
           crassa OR74A]
 gi|11595524|emb|CAC18318.1| mitochondrial precursor protein import receptor tom70 [Neurospora
           crassa]
 gi|28922778|gb|EAA32000.1| mitochondrial precursor protein import receptor tom70 [Neurospora
           crassa OR74A]
          Length = 624

 Score =  129 bits (323), Expect = 6e-27,   Method: Compositional matrix adjust.
 Identities = 105/374 (28%), Positives = 184/374 (49%), Gaps = 35/374 (9%)

Query: 10  AKEEISKRSFFKPSKQFIKTYLKSFPNDPILQPDGLSNGVELTNGDTNESHELDLLS-KA 68
           AKE +  +    PS  F+  YL+SF + P  +P+GL + VEL+        +L L   ++
Sbjct: 256 AKEILETKPPKLPSSTFVGNYLQSFRSKP--RPEGLEDSVELSEETGLGQLQLGLKHLES 313

Query: 69  KRAFEHEDYLTAIRHCTEEIESTSSNHTKALARLLRATVYIFTSQSTKAIEDLTQLVEDT 128
           K    +E+   A +     ++       +ALA  LR T +    +  +A+ DL++ +E  
Sbjct: 314 KTGTGYEEGSAAFKKA---LDLGELGPHEALAYNLRGTFHCLMGKHEEALADLSKSIE-- 368

Query: 129 SVDPKIKVNAHIKRAVVHLH------AASDFTKAFADLDEAEKVDPNVADSYYQRGQIYC 182
            +DP +   ++IKRA ++L       A  DF KA     E    DP++   YY R Q++ 
Sbjct: 369 -LDPAM-TQSYIKRASMNLELGHPDKAEEDFNKAI----EQNAEDPDI---YYHRAQLHF 419

Query: 183 LFGQYEEALRNLDKTIALNPNFHVARAQRHFVVHKMIVPGDRERVEQSLKEFRNFVDTHS 242
           + G++ EA ++  K+I L+ +F  +  Q     +KM        +  S+  FR  +    
Sbjct: 420 IKGEFAEAAKDYQKSIDLDSDFIFSHIQLGVTQYKM------GSIASSMATFRRCMKNFD 473

Query: 243 NVVEACTLFAQVLVDQEDFDGAEEYFNRSIRVDPENASL------YVHRAMLMLQARGNV 296
              +    + ++L+DQ  F  A E F+ +I ++ E   +       +++A+ + Q + + 
Sbjct: 474 QTPDVYNYYGELLLDQNKFQEAIEKFDTAIALEKETKPMCMNVLPLINKALALFQWKQDY 533

Query: 297 DEAIKLIEKAISIDKSCMFAYETLGTIEVQRGRLEEAVKCFNKALPLARDEAELSHIYSL 356
            EA +L EKA+ ID  C  A  T+  + +Q+G++ EA+K F +A  LAR E EL +  S 
Sbjct: 534 AEAEQLCEKALIIDPECDIAVATMAQLLLQQGKVVEALKFFERAAELARTEGELVNALSY 593

Query: 357 RDAAIAQMKVCERY 370
            +A   Q++V E Y
Sbjct: 594 AEATRTQIQVQENY 607



 Score = 43.9 bits (102), Expect = 0.19,   Method: Compositional matrix adjust.
 Identities = 24/59 (40%), Positives = 37/59 (62%), Gaps = 4/59 (6%)

Query: 456 SGQKHAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNP 514
           +G +  ++ F KA  DL E   + P+ A +Y  RG  +CL G++EEAL +L K+I L+P
Sbjct: 317 TGYEEGSAAFKKAL-DLGE---LGPHEALAYNLRGTFHCLMGKHEEALADLSKSIELDP 371


>gi|336472152|gb|EGO60312.1| mitochondrial outer membrane 72K protein [Neurospora tetrasperma
           FGSC 2508]
 gi|350294634|gb|EGZ75719.1| mitochondrial outer membrane 72K protein [Neurospora tetrasperma
           FGSC 2509]
          Length = 624

 Score =  128 bits (322), Expect = 6e-27,   Method: Compositional matrix adjust.
 Identities = 105/374 (28%), Positives = 184/374 (49%), Gaps = 35/374 (9%)

Query: 10  AKEEISKRSFFKPSKQFIKTYLKSFPNDPILQPDGLSNGVELTNGDTNESHELDLLS-KA 68
           AKE +  +    PS  F+  YL+SF + P  +P+GL + VEL+        +L L   ++
Sbjct: 256 AKEILETKPPKLPSSTFVGNYLQSFRSKP--RPEGLEDSVELSEETGLGQLQLGLKHLES 313

Query: 69  KRAFEHEDYLTAIRHCTEEIESTSSNHTKALARLLRATVYIFTSQSTKAIEDLTQLVEDT 128
           K    +E+   A +     ++       +ALA  LR T +    +  +A+ DL++ +E  
Sbjct: 314 KTGTGYEEGSAAFKKA---LDLGELGPHEALAYNLRGTFHCLMGKHEEALADLSKSIE-- 368

Query: 129 SVDPKIKVNAHIKRAVVHLH------AASDFTKAFADLDEAEKVDPNVADSYYQRGQIYC 182
            +DP +   ++IKRA ++L       A  DF KA     E    DP++   YY R Q++ 
Sbjct: 369 -LDPAM-TQSYIKRASMNLELGHPDKAEEDFNKAI----EQNAEDPDI---YYHRAQLHF 419

Query: 183 LFGQYEEALRNLDKTIALNPNFHVARAQRHFVVHKMIVPGDRERVEQSLKEFRNFVDTHS 242
           + G++ EA ++  K+I L+ +F  +  Q     +KM        +  S+  FR  +    
Sbjct: 420 IKGEFAEAAKDYQKSIDLDSDFIFSHIQLGVTQYKM------GSIASSMATFRRCMKNFD 473

Query: 243 NVVEACTLFAQVLVDQEDFDGAEEYFNRSIRVDPENASL------YVHRAMLMLQARGNV 296
              +    + ++L+DQ  F  A E F+ +I ++ E   +       +++A+ + Q + + 
Sbjct: 474 QTPDVYNYYGELLLDQNKFQEAIEKFDTAIALEKETKPMCMNVLPLINKALALFQWKQDY 533

Query: 297 DEAIKLIEKAISIDKSCMFAYETLGTIEVQRGRLEEAVKCFNKALPLARDEAELSHIYSL 356
            EA +L EKA+ ID  C  A  T+  + +Q+G++ EA+K F +A  LAR E EL +  S 
Sbjct: 534 AEAEQLCEKALIIDPECDIAVATMAQLLLQQGKVVEALKFFERAAELARTEGELVNALSY 593

Query: 357 RDAAIAQMKVCERY 370
            +A   Q++V E Y
Sbjct: 594 AEATRTQIQVQENY 607



 Score = 44.3 bits (103), Expect = 0.19,   Method: Compositional matrix adjust.
 Identities = 24/59 (40%), Positives = 37/59 (62%), Gaps = 4/59 (6%)

Query: 456 SGQKHAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNP 514
           +G +  ++ F KA  DL E   + P+ A +Y  RG  +CL G++EEAL +L K+I L+P
Sbjct: 317 TGYEEGSAAFKKAL-DLGE---LGPHEALAYNLRGTFHCLMGKHEEALADLSKSIELDP 371


>gi|67477439|sp|P23231.2|TOM70_NEUCR RecName: Full=Mitochondrial import receptor subunit tom-70;
           AltName: Full=72 kDa mitochondrial outer membrane
           protein; AltName: Full=Mitochondrial import receptor for
           the ADP/ATP carrier; AltName: Full=Mitochondrial
           precursor proteins import receptor; AltName:
           Full=Translocase of outer membrane tom-70
 gi|4530327|gb|AAD21979.1| mitochondrial precursor protein import receptor tom70 [Neurospora
           crassa]
          Length = 624

 Score =  128 bits (322), Expect = 6e-27,   Method: Compositional matrix adjust.
 Identities = 105/374 (28%), Positives = 184/374 (49%), Gaps = 35/374 (9%)

Query: 10  AKEEISKRSFFKPSKQFIKTYLKSFPNDPILQPDGLSNGVELTNGDTNESHELDLLS-KA 68
           AKE +  +    PS  F+  YL+SF + P  +P+GL + VEL+        +L L   ++
Sbjct: 256 AKEILETKPPKLPSSTFVGNYLQSFRSKP--RPEGLEDSVELSEETGLGQLQLGLKHLES 313

Query: 69  KRAFEHEDYLTAIRHCTEEIESTSSNHTKALARLLRATVYIFTSQSTKAIEDLTQLVEDT 128
           K    +E+   A +     ++       +ALA  LR T +    +  +A+ DL++ +E  
Sbjct: 314 KTGTGYEEGSAAFKKA---LDLGELGPHEALAYNLRGTFHCLMGKHEEALADLSKSIE-- 368

Query: 129 SVDPKIKVNAHIKRAVVHLH------AASDFTKAFADLDEAEKVDPNVADSYYQRGQIYC 182
            +DP +   ++IKRA ++L       A  DF KA     E    DP++   YY R Q++ 
Sbjct: 369 -LDPAM-TQSYIKRASMNLELGHPDKAEEDFNKAI----EQNAEDPDI---YYHRAQLHF 419

Query: 183 LFGQYEEALRNLDKTIALNPNFHVARAQRHFVVHKMIVPGDRERVEQSLKEFRNFVDTHS 242
           + G++ EA ++  K+I L+ +F  +  Q     +KM        +  S+  FR  +    
Sbjct: 420 IKGEFAEAAKDYQKSIDLDSDFIFSHIQLGVTQYKM------GSIASSMATFRRCMKNFD 473

Query: 243 NVVEACTLFAQVLVDQEDFDGAEEYFNRSIRVDPENASL------YVHRAMLMLQARGNV 296
              +    + ++L+DQ  F  A E F+ +I ++ E   +       +++A+ + Q + + 
Sbjct: 474 QTPDVYNYYGELLLDQNKFQEAIEKFDTAIALEKETKPMCMNVLPLINKALALFQWKQDY 533

Query: 297 DEAIKLIEKAISIDKSCMFAYETLGTIEVQRGRLEEAVKCFNKALPLARDEAELSHIYSL 356
            EA +L EKA+ ID  C  A  T+  + +Q+G++ EA+K F +A  LAR E EL +  S 
Sbjct: 534 AEAEQLCEKALIIDPECDIAVATMAQLLLQQGKVVEALKFFERAAELARTEGELVNALSY 593

Query: 357 RDAAIAQMKVCERY 370
            +A   Q++V E Y
Sbjct: 594 AEATRTQIQVQENY 607



 Score = 44.3 bits (103), Expect = 0.18,   Method: Compositional matrix adjust.
 Identities = 24/59 (40%), Positives = 37/59 (62%), Gaps = 4/59 (6%)

Query: 456 SGQKHAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNP 514
           +G +  ++ F KA  DL E   + P+ A +Y  RG  +CL G++EEAL +L K+I L+P
Sbjct: 317 TGYEEGSAAFKKAL-DLGE---LGPHEALAYNLRGTFHCLMGKHEEALADLSKSIELDP 371


>gi|367038933|ref|XP_003649847.1| hypothetical protein THITE_2108888 [Thielavia terrestris NRRL 8126]
 gi|346997108|gb|AEO63511.1| hypothetical protein THITE_2108888 [Thielavia terrestris NRRL 8126]
          Length = 631

 Score =  128 bits (322), Expect = 6e-27,   Method: Compositional matrix adjust.
 Identities = 109/376 (28%), Positives = 179/376 (47%), Gaps = 39/376 (10%)

Query: 10  AKEEISKRSFFKPSKQFIKTYLKSFPNDPILQPDGLSNGVELTNGDTNESHELDLLSKAK 69
           AKE +  +    PS  F+  YL+SF   P  +P GL + VEL      E      L K  
Sbjct: 264 AKEILRTKPPKLPSSTFVGNYLQSFRAKP--RPAGLEDSVELP-----EESGKGQLQKGL 316

Query: 70  RAFEHE---DYLTAIRHCTEEIESTSSNHTKALARLLRATVYIFTSQSTKAIEDLTQLVE 126
           +A E +    Y  A     + +E       +A A  LR T      Q   A+ DLT+ +E
Sbjct: 317 KALESKTGPGYEEASEAFDKALELGDLGEYEAYALNLRGTFRCLKGQHELALADLTKSIE 376

Query: 127 DTSVDPKIKVNAHIKRAVVHLH------AASDFTKAFADLDEAEKVDPNVADSYYQRGQI 180
              +DP++   ++IKRA ++L       A  DF  A A   E    DP++   YY R Q+
Sbjct: 377 ---LDPEM-TQSYIKRASMNLELGAPEKAEEDFAAALAKNAE----DPDI---YYHRAQL 425

Query: 181 YCLFGQYEEALRNLDKTIALNPNFHVARAQRHFVVHKMIVPGDRERVEQSLKEFRNFVDT 240
           + + G++ +A ++  K+I L+ +F  +  Q     +KM        +  S+  FR  +  
Sbjct: 426 HFIKGEFADAQKDYQKSIDLDRDFIFSHIQLGVTQYKM------GSIASSMATFRRCIKN 479

Query: 241 HSNVVEACTLFAQVLVDQEDFDGAEEYFNRSIRVDPE------NASLYVHRAMLMLQARG 294
                +    + ++L+DQ  F  A E F+ +I ++ E      N    +++++ + Q + 
Sbjct: 480 FDKTPDVYNYYGELLLDQSKFAEAIEKFDTAIELEKETKPTCMNVLPLINKSLALFQWKN 539

Query: 295 NVDEAIKLIEKAISIDKSCMFAYETLGTIEVQRGRLEEAVKCFNKALPLARDEAELSHIY 354
           +  EA KL EKA+ ID  C  A  T+  + +Q+G++ EA+K F +A  LAR E EL +  
Sbjct: 540 DFAEAEKLCEKALIIDPECDIAVATMAQLLLQQGKVTEALKYFERAAELARTEGELVNAL 599

Query: 355 SLRDAAIAQMKVCERY 370
           S  +A   Q++V E+Y
Sbjct: 600 SYAEATRTQIQVQEKY 615


>gi|3028|emb|CAA37767.1| mitochondrial outer membrane 72K protein [Neurospora crassa]
 gi|227471|prf||1704253A ADP/ATP carrier receptor
          Length = 619

 Score =  128 bits (321), Expect = 8e-27,   Method: Compositional matrix adjust.
 Identities = 105/374 (28%), Positives = 184/374 (49%), Gaps = 35/374 (9%)

Query: 10  AKEEISKRSFFKPSKQFIKTYLKSFPNDPILQPDGLSNGVELTNGDTNESHELDLLS-KA 68
           AKE +  +    PS  F+  YL+SF + P  +P+GL + VEL+        +L L   ++
Sbjct: 251 AKEILETKPPKLPSSTFVGNYLQSFRSKP--RPEGLEDSVELSEETGLGQLQLGLKHLES 308

Query: 69  KRAFEHEDYLTAIRHCTEEIESTSSNHTKALARLLRATVYIFTSQSTKAIEDLTQLVEDT 128
           K    +E+   A +     ++       +ALA  LR T +    +  +A+ DL++ +E  
Sbjct: 309 KTGTGYEEGSAAFKKA---LDLGELGPHEALAYNLRGTFHCLMGKHEEALADLSKSIE-- 363

Query: 129 SVDPKIKVNAHIKRAVVHLH------AASDFTKAFADLDEAEKVDPNVADSYYQRGQIYC 182
            +DP +   ++IKRA ++L       A  DF KA     E    DP++   YY R Q++ 
Sbjct: 364 -LDPAM-TQSYIKRASMNLELGHPDKAEEDFNKAI----EQNAEDPDI---YYHRAQLHF 414

Query: 183 LFGQYEEALRNLDKTIALNPNFHVARAQRHFVVHKMIVPGDRERVEQSLKEFRNFVDTHS 242
           + G++ EA ++  K+I L+ +F  +  Q     +KM        +  S+  FR  +    
Sbjct: 415 IKGEFAEAAKDYQKSIDLDSDFIFSHIQLGVTQYKM------GSIASSMATFRRCMKNFD 468

Query: 243 NVVEACTLFAQVLVDQEDFDGAEEYFNRSIRVDPENASL------YVHRAMLMLQARGNV 296
              +    + ++L+DQ  F  A E F+ +I ++ E   +       +++A+ + Q + + 
Sbjct: 469 QTPDVYNYYGELLLDQNKFQEAIEKFDTAIALEKETKPMCMNVLPLINKALALFQWKQDY 528

Query: 297 DEAIKLIEKAISIDKSCMFAYETLGTIEVQRGRLEEAVKCFNKALPLARDEAELSHIYSL 356
            EA +L EKA+ ID  C  A  T+  + +Q+G++ EA+K F +A  LAR E EL +  S 
Sbjct: 529 AEAEQLCEKALIIDPECDIAVATMAQLLLQQGKVVEALKFFERAAELARTEGELVNALSY 588

Query: 357 RDAAIAQMKVCERY 370
            +A   Q++V E Y
Sbjct: 589 AEATRTQIQVQENY 602



 Score = 44.3 bits (103), Expect = 0.19,   Method: Compositional matrix adjust.
 Identities = 24/59 (40%), Positives = 37/59 (62%), Gaps = 4/59 (6%)

Query: 456 SGQKHAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNP 514
           +G +  ++ F KA  DL E   + P+ A +Y  RG  +CL G++EEAL +L K+I L+P
Sbjct: 312 TGYEEGSAAFKKAL-DLGE---LGPHEALAYNLRGTFHCLMGKHEEALADLSKSIELDP 366


>gi|70988899|ref|XP_749301.1| mitochondrial outer membrane translocase receptor (TOM70), putative
           [Aspergillus fumigatus Af293]
 gi|66846932|gb|EAL87263.1| mitochondrial outer membrane translocase receptor (TOM70), putative
           [Aspergillus fumigatus Af293]
 gi|159128715|gb|EDP53829.1| mitochondrial outer membrane translocase receptor (TOM70), putative
           [Aspergillus fumigatus A1163]
          Length = 630

 Score =  128 bits (321), Expect = 8e-27,   Method: Compositional matrix adjust.
 Identities = 100/361 (27%), Positives = 178/361 (49%), Gaps = 33/361 (9%)

Query: 22  PSKQFIKTYLKSFPNDPILQPDGLSNGVELTNGDTNESHELDLLSKAKRAFEHEDYLTAI 81
           PS  F+  YL+SF   P   P+GL    +L+           L++ +K+    + Y  A 
Sbjct: 271 PSPTFVSNYLQSF--RPQSLPEGLEESADLSEESGKGQLRKGLVAMSKKT--GDGYEEAA 326

Query: 82  RHCTEEIESTSSNHTKALARLLRATVYIFTSQSTKAIEDLTQLVEDTSVDPKIKVNAHIK 141
               + +E       +ALA  +RAT       +  A+ DL + +E   + P + V ++IK
Sbjct: 327 AAFEKALELGDLGEYEALALNMRATFTYLEGNAQSALADLNKSIE---LQPSL-VQSYIK 382

Query: 142 RAVVHLH------AASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLD 195
           RA +HL       AA DF  A        K DP++   YY R Q++ + G++ EA ++  
Sbjct: 383 RASLHLELGNKDAAADDFELAITH----NKDDPDI---YYHRAQLHFILGEFAEAAKDYQ 435

Query: 196 KTIALNPNFHVARAQRHFVVHKMIVPGDRERVEQSLKEFRNFVDTHSNVVEACTLFAQVL 255
           K+I L+  F  +  Q     +KM        V  ++  FR  V    +V +    + ++L
Sbjct: 436 KSIDLDRTFIFSHIQLGVTQYKM------GSVASAMATFRRSVKNFEDVPDVYNYYGELL 489

Query: 256 VDQEDFDGAEEYFNRSIRVDPENASL------YVHRAMLMLQARGNVDEAIKLIEKAISI 309
           +DQ++F  A E F++++ ++ ++  +       +++A+ + Q + +  EA  L +KA+ I
Sbjct: 490 LDQQNFSEAIEKFDKAVEMEKQSKPMGINVLPLINKALALFQWKHDFQEAENLCQKALII 549

Query: 310 DKSCMFAYETLGTIEVQRGRLEEAVKCFNKALPLARDEAELSHIYSLRDAAIAQMKVCER 369
           D  C  A  T+  + +Q+G++ +A+K F +A  LAR EAE+ +  S  +A   Q++V ER
Sbjct: 550 DPECDIAVGTMAQLLLQQGKVSQALKYFERAAELARTEAEIVNAISYAEATRTQLEVQER 609

Query: 370 Y 370
           Y
Sbjct: 610 Y 610


>gi|367025913|ref|XP_003662241.1| hypothetical protein MYCTH_2302646 [Myceliophthora thermophila ATCC
           42464]
 gi|347009509|gb|AEO56996.1| hypothetical protein MYCTH_2302646 [Myceliophthora thermophila ATCC
           42464]
          Length = 621

 Score =  127 bits (320), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 107/376 (28%), Positives = 182/376 (48%), Gaps = 39/376 (10%)

Query: 10  AKEEISKRSFFKPSKQFIKTYLKSFPNDPILQPDGLSNGVELTNGDTNESHELDLLSKAK 69
           AKE +  +    PS  F+  YL+SF   P  +P GL + VEL     +E   L  L K  
Sbjct: 254 AKEILKTKPAKLPSSTFVGNYLQSFRTKP--RPVGLEDSVEL-----DEESGLGQLQKGL 306

Query: 70  RAFEHE---DYLTAIRHCTEEIESTSSNHTKALARLLRATVYIFTSQSTKAIEDLTQLVE 126
           +A E +    Y  A     + +E       +A A  LR T      +  +A+ DL++ +E
Sbjct: 307 KALESKTGPGYEEAAEAFDKALELGDLGPHEAYAYNLRGTFRCLKGKHEEALADLSKSIE 366

Query: 127 DTSVDPKIKVNAHIKRAVVHLH------AASDFTKAFADLDEAEKVDPNVADSYYQRGQI 180
              +DP++   ++IKRA ++L       A  DF  A +   E    DP++   YY R Q+
Sbjct: 367 ---LDPEL-TQSYIKRASMNLELGAPEKAEEDFAAALSKNAE----DPDI---YYHRAQL 415

Query: 181 YCLFGQYEEALRNLDKTIALNPNFHVARAQRHFVVHKMIVPGDRERVEQSLKEFRNFVDT 240
           + + G++ EA ++  K+I L+ +F  +  Q     +KM        +  S+  FR  +  
Sbjct: 416 HFIKGEFAEAQKDYQKSIDLDRDFIFSHIQLGVTQYKM------GSIASSMATFRRCMKN 469

Query: 241 HSNVVEACTLFAQVLVDQEDFDGAEEYFNRSIRVDPE------NASLYVHRAMLMLQARG 294
                +    + ++L+DQ  +  A E F+ +I ++ E      N    +++++ + Q + 
Sbjct: 470 FEKTPDVYNYYGELLLDQGKYHEAIEKFDTAIELERETKPTCMNVLPLINKSLALFQWKQ 529

Query: 295 NVDEAIKLIEKAISIDKSCMFAYETLGTIEVQRGRLEEAVKCFNKALPLARDEAELSHIY 354
           +  EA KL EKA+ ID  C  A  T+  + +Q+G++ EA+K F +A  LAR E EL +  
Sbjct: 530 DFSEAEKLCEKALIIDPECDIAVATMAQLLLQQGKVTEALKYFERAAELARTEGELVNAL 589

Query: 355 SLRDAAIAQMKVCERY 370
           S  +A   Q++V E+Y
Sbjct: 590 SYAEATRTQIQVQEKY 605



 Score = 40.8 bits (94), Expect = 1.8,   Method: Compositional matrix adjust.
 Identities = 26/67 (38%), Positives = 38/67 (56%), Gaps = 6/67 (8%)

Query: 452 LENESGQKH--AASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKT 509
           LE+++G  +  AA  F KA     E   + P+ A +Y  RG   CL G++EEAL +L K+
Sbjct: 309 LESKTGPGYEEAAEAFDKAL----ELGDLGPHEAYAYNLRGTFRCLKGKHEEALADLSKS 364

Query: 510 IALNPNF 516
           I L+P  
Sbjct: 365 IELDPEL 371


>gi|358395791|gb|EHK45178.1| hypothetical protein TRIATDRAFT_151618 [Trichoderma atroviride IMI
           206040]
          Length = 609

 Score =  127 bits (320), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 106/371 (28%), Positives = 182/371 (49%), Gaps = 22/371 (5%)

Query: 7   AQH-AKEEISKRSFFKPSKQFIKTYLKSFPNDPILQPDGLSNGVELTNGDTNESHELDLL 65
           A+H AKE ++ R    PS  F+  YL+SF   P  +P  L + +EL+  DT    +L L 
Sbjct: 234 AEHKAKEVMASRPAKLPSPIFVGNYLQSFRQKP--RPAALDDSIELSL-DTGLG-QLQLG 289

Query: 66  SKAKRAFEHEDYLTAIRHCTEEIESTSSNHTKALARLLRATVYIFTSQSTKAIEDLTQLV 125
            +       E Y  A +   + IE       +ALA  LR T+         A ED  + +
Sbjct: 290 FQGLEQKTAEGYEEARQAFEKAIELGDLGEHEALAYNLRGTIRTLLGNHAAATEDFDRSI 349

Query: 126 EDTSVDPKIKVNAHIKRAVVHLHAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFG 185
           E   +DPK+   ++IKRA + L    +  KA A+ D+A + D +  D YY R Q + + G
Sbjct: 350 E---LDPKM-TQSYIKRASISLELG-EPDKADAEFDKALEQDNDDPDVYYHRAQAHFIKG 404

Query: 186 QYEEALRNLDKTIALNPNFHVARAQRHFVVHKMIVPGDRERVEQSLKEFRNFVDTHSNVV 245
               A ++  K+I L+ +F  +  Q     +KM        +  S+  FR  +     V 
Sbjct: 405 DLASAQKDYQKSIDLDKDFIFSHIQLGVTQYKM------GSIASSMATFRRCIKNFPKVP 458

Query: 246 EACTLFAQVLVDQEDFDGAEEYFNRSIRVDPENASL------YVHRAMLMLQARGNVDEA 299
           +    + ++L+DQ ++  A E F+ ++ ++ ++  +       +++A+ + Q+  +  EA
Sbjct: 459 DVYNYYGELLLDQGNYPEAIEKFDTAMEMEKQSKPMSMNVLPLINKALALFQSSSDFKEA 518

Query: 300 IKLIEKAISIDKSCMFAYETLGTIEVQRGRLEEAVKCFNKALPLARDEAELSHIYSLRDA 359
            KL +KA+ ID  C  A  T+  + +Q+ ++ EA+K F +A  LAR E E+ +  S  +A
Sbjct: 519 EKLCQKALIIDPECDIAVATMAQLLLQQNKVTEALKYFERAAELARTEGEIVNALSYAEA 578

Query: 360 AIAQMKVCERY 370
              Q+KV E+Y
Sbjct: 579 TRTQVKVTEKY 589


>gi|429862440|gb|ELA37090.1| mitochondrial precursor proteins import receptor [Colletotrichum
           gloeosporioides Nara gc5]
          Length = 600

 Score =  127 bits (319), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 107/389 (27%), Positives = 191/389 (49%), Gaps = 36/389 (9%)

Query: 8   QHAKEEISKRSFFKPSKQFIKTYLKSFPNDPILQPDGLSNGVELTNGDTNESHELDLLSK 67
           Q A+E ++ R    PS  F+  YL+SF   P  +P GL + + L         +L L + 
Sbjct: 231 QKAQEMMANRPNKLPSHTFVGNYLQSFRVKP--RPAGLEDSIALDEETGKGQLQLGLAAL 288

Query: 68  AKRAFEHEDYLTAIRHCTEEIESTSSNHTKALARLLRATVYIFTSQSTKAIEDLTQLVED 127
            K+    + Y  A     + +E       +ALA  LR T      +   A+ DL++ +E 
Sbjct: 289 EKKT--GDGYEEARAAFEKALELNELEEFEALAYNLRGTFSCLLGKHDDAMSDLSKSIE- 345

Query: 128 TSVDPKIKVNAHIKRAVVHLH------AASDFTKAFADLDEAEKVDPNVADSYYQRGQIY 181
             +DP +   ++IKRA ++L       AA DF KA     E    DP++   YY R Q++
Sbjct: 346 --LDPSM-TQSYIKRASMNLELGAPEKAADDFDKAM----EQNAEDPDI---YYHRAQLH 395

Query: 182 CLFGQYEEALRNLDKTIALNPNFHVARAQRHFVVHKMIVPGDRERVEQSLKEFRNFVDTH 241
            + G++ +A ++  K+I L+ +F  +  Q     +KM        +  S+  FR  +   
Sbjct: 396 FIKGEFSDAAKDYQKSIDLDRDFIFSHIQLGVTQYKM------GSIASSMSTFRRCIKNF 449

Query: 242 SNVVEACTLFAQVLVDQEDFDGAEEYFNRSIRVDPENASL------YVHRAMLMLQARGN 295
            +V +    + ++L+DQ +F  A E F+ +I ++ +   +       +++A+ + Q + +
Sbjct: 450 KDVPDVYNYYGELLLDQGNFQEAIEKFDAAIDMESKTKPMAMNVLPLINKALTLFQWKQD 509

Query: 296 VDEAIKLIEKAISIDKSCMFAYETLGTIEVQRGRLEEAVKCFNKALPLARDEAELSHIYS 355
             EA KL +KA+ ID  C  A  T+  + +Q+G++ EA+K F +A  LAR E E+ +  S
Sbjct: 510 FGEAEKLCQKALIIDPECDIAVATMAQLLLQQGKVTEALKYFERAAELARTEGEIVNALS 569

Query: 356 LRDAAIAQMKVCERYNIKKKVSPRSQNIT 384
             +A   Q++V E+Y    K++ + Q I+
Sbjct: 570 YAEATRTQLQVQEKY---PKLAAKLQGIS 595



 Score = 38.9 bits (89), Expect = 8.0,   Method: Compositional matrix adjust.
 Identities = 20/62 (32%), Positives = 35/62 (56%), Gaps = 3/62 (4%)

Query: 468 AFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALN---PNFHVARAQRH 524
           A +DL ++ ++DP++  SY +R  +    G  E+A  + DK +  N   P+ +  RAQ H
Sbjct: 336 AMSDLSKSIELDPSMTQSYIKRASMNLELGAPEKAADDFDKAMEQNAEDPDIYYHRAQLH 395

Query: 525 FV 526
           F+
Sbjct: 396 FI 397


>gi|121710870|ref|XP_001273051.1| mitochondrial outer membrane translocase receptor (TOM70), putative
           [Aspergillus clavatus NRRL 1]
 gi|119401201|gb|EAW11625.1| mitochondrial outer membrane translocase receptor (TOM70), putative
           [Aspergillus clavatus NRRL 1]
          Length = 630

 Score =  127 bits (318), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 98/361 (27%), Positives = 178/361 (49%), Gaps = 33/361 (9%)

Query: 22  PSKQFIKTYLKSFPNDPILQPDGLSNGVELTNGDTNESHELDLLSKAKRAFEHEDYLTAI 81
           PS  F+  YL+SF   P   P+GL    +L++          L++ +K+    + Y  A 
Sbjct: 271 PSATFVSNYLQSF--RPQSLPEGLEESADLSDESGKGQLRKGLIAMSKKT--GDGYEEAA 326

Query: 82  RHCTEEIESTSSNHTKALARLLRATVYIFTSQSTKAIEDLTQLVEDTSVDPKIKVNAHIK 141
               + +E       +ALA  +RAT       +  A+ DL + +E   + P + V ++IK
Sbjct: 327 AAFEKALELGDLGEYEALALNMRATFTYLAGNAQSALADLNKSIE---LQPSL-VQSYIK 382

Query: 142 RAVVHLH------AASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLD 195
           RA +HL       AA DF  A        K DP++   YY R Q++ + G++ EA ++  
Sbjct: 383 RASLHLELGNKDAAADDFELAITH----NKDDPDI---YYHRAQLHFILGEFAEAAKDYQ 435

Query: 196 KTIALNPNFHVARAQRHFVVHKMIVPGDRERVEQSLKEFRNFVDTHSNVVEACTLFAQVL 255
           K+I L+  F  +  Q     +KM        V  ++  FR  V    +V +    + ++L
Sbjct: 436 KSIDLDRTFIFSHIQLGVTQYKM------GSVASAMATFRRSVKNFEDVPDVYNYYGELL 489

Query: 256 VDQEDFDGAEEYFNRSIRVDPENASL------YVHRAMLMLQARGNVDEAIKLIEKAISI 309
           +DQ++F  A E F++++ ++ ++  +       +++A+ + Q + +  EA  L +KA+ I
Sbjct: 490 LDQQNFSEAIEKFDKAVEMEKQSKPMGINVLPLINKALALFQWKHDFQEAENLCQKALII 549

Query: 310 DKSCMFAYETLGTIEVQRGRLEEAVKCFNKALPLARDEAELSHIYSLRDAAIAQMKVCER 369
           D  C  A  T+  + +Q+G++ +A+K F +A  LAR E E+ +  S  +A   Q++V E+
Sbjct: 550 DPECDIAVGTMAQLLLQQGKVSQALKYFERAAELARTEGEIVNAISYAEATRTQLEVQEK 609

Query: 370 Y 370
           Y
Sbjct: 610 Y 610


>gi|406860680|gb|EKD13737.1| hypothetical protein MBM_07938 [Marssonina brunnea f. sp.
           'multigermtubi' MB_m1]
          Length = 625

 Score =  127 bits (318), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 98/361 (27%), Positives = 174/361 (48%), Gaps = 33/361 (9%)

Query: 22  PSKQFIKTYLKSFPNDPILQPDGLSNGVELTNGDTNESHELDLLSKAKRAFEHEDYLTAI 81
           PS  F+  YL+SF   P   P GL    E+  G      ++ L +  K+    + Y  A 
Sbjct: 266 PSPTFVTNYLQSFRARP--PPAGLELDAEIEEGTGKAQLQIGLRAMEKKT--GDGYEEAA 321

Query: 82  RHCTEEIESTSSNHTKALARLLRATVYIFTSQSTKAIEDLTQLVEDTSVDPKIKVNAHIK 141
               + ++       +A A  +R T      ++ +A+ DLT+ V+   + P +   + IK
Sbjct: 322 AAFDKALDFDDLAEHEAFAYNMRGTFRYLRGENLEALSDLTKSVD---LQPGL-TQSFIK 377

Query: 142 RAVVHLH------AASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLD 195
           RA +HL       AA DF KA     E    DP++   YY R Q++ + G++ EA ++  
Sbjct: 378 RASMHLELGEKDLAAEDFAKAM----EQNNDDPDI---YYHRAQLHFILGEFAEAAKDYQ 430

Query: 196 KTIALNPNFHVARAQRHFVVHKMIVPGDRERVEQSLKEFRNFVDTHSNVVEACTLFAQVL 255
           K+I L+ +F  +  Q     +KM        V  S+  FR  +     V +    + ++L
Sbjct: 431 KSIDLDRDFIFSHIQLGVTQYKM------GSVASSMATFRRCIKNFDQVPDVYNYYGELL 484

Query: 256 VDQEDFDGAEEYFNRSIRVDPENASL------YVHRAMLMLQARGNVDEAIKLIEKAISI 309
           +DQ+ +  A E F+ ++ ++ +   L       +++A+ + Q + +  EA KL +KA+ I
Sbjct: 485 LDQQKYQEAIEKFDTAVEMEKQTKPLGMNVLPLINKALALFQWKQDFAEAEKLCQKALII 544

Query: 310 DKSCMFAYETLGTIEVQRGRLEEAVKCFNKALPLARDEAELSHIYSLRDAAIAQMKVCER 369
           D  C  A  T+  + +Q+G++ EA+K F +A  L+R E E+ +  S  +A   Q++V E+
Sbjct: 545 DPECDIAVATMAQLLLQQGKVTEALKYFERAADLSRTEGEIVNALSYAEATRTQLEVQEK 604

Query: 370 Y 370
           Y
Sbjct: 605 Y 605


>gi|346326268|gb|EGX95864.1| mitochondrial precursor protein import receptor tom70 [Cordyceps
           militaris CM01]
          Length = 621

 Score =  126 bits (317), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 105/369 (28%), Positives = 171/369 (46%), Gaps = 25/369 (6%)

Query: 10  AKEEISKRSFFKPSKQFIKTYLKSFPNDPILQPDGLSNGVELT--NGDTNESHELDLLSK 67
           AKE +S R+   PS  F+  YL+SF   P  +P GL +  EL+   G     H L  L K
Sbjct: 248 AKEMMSSRTAKLPSPIFVGNYLQSFRPKP--RPAGLEDSAELSLDTGLGQLQHGLQGLDK 305

Query: 68  AKRAFEHEDYLTAIRHCTEEIESTSSNHTKALARLLRATVYIFTSQSTKAIEDLTQLVED 127
              A     Y  A     + IE       +ALA   R T+         A ED  + +E 
Sbjct: 306 RTSA----GYEQARLAFEKAIELGELGDNEALAHNCRGTMRTLLGDHAAATEDFNKSIE- 360

Query: 128 TSVDPKIKVNAHIKRAVVHLHAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQY 187
             +DP +   ++IK A + L       +A  + D A K DPN  D YY R Q   + G  
Sbjct: 361 --LDPTM-TQSYIKHASISLELGETL-EADREFDLALKQDPNDPDVYYHRAQANFIRGDL 416

Query: 188 EEALRNLDKTIALNPNFHVARAQRHFVVHKMIVPGDRERVEQSLKEFRNFVDTHSNVVEA 247
            EA ++  K+I L+ +F  +  Q     +KM        +  S+  FR  +     V + 
Sbjct: 417 SEAQKDYQKSIDLDKDFIFSHIQLGVTQYKM------GSIASSMATFRRCIKNFPKVPDV 470

Query: 248 CTLFAQVLVDQEDFDGAEEYFNRSIRVDPENASL------YVHRAMLMLQARGNVDEAIK 301
              + ++L+DQ ++  A E F+ ++ ++ +   +       +++A+ + Q + +  EA  
Sbjct: 471 YNYYGELLLDQGNYAEAVEKFDTAVEMEKQTKPMSMNVLPLINKALALFQWKQDFKEAEN 530

Query: 302 LIEKAISIDKSCMFAYETLGTIEVQRGRLEEAVKCFNKALPLARDEAELSHIYSLRDAAI 361
           L EKA+ ID  C  A  T+  + +Q+ ++ +A+K F +A  LAR E E+ +  S  +A  
Sbjct: 531 LCEKALIIDPECDIAVATMAQLLLQQNQVAKALKYFERAAELARTEGEIVNALSYAEATR 590

Query: 362 AQMKVCERY 370
            Q+KV E+Y
Sbjct: 591 TQVKVTEKY 599


>gi|156056176|ref|XP_001594012.1| hypothetical protein SS1G_05440 [Sclerotinia sclerotiorum 1980]
 gi|154703224|gb|EDO02963.1| hypothetical protein SS1G_05440 [Sclerotinia sclerotiorum 1980
           UF-70]
          Length = 615

 Score =  126 bits (317), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 95/355 (26%), Positives = 171/355 (48%), Gaps = 21/355 (5%)

Query: 22  PSKQFIKTYLKSFPNDPILQPDGLSNGVELTNGDTNESHELDLLSKAKRAFEHEDYLTAI 81
           PS  F+  YL+SF + P   P GL + VE++        +L L + AK+   +E Y  A 
Sbjct: 258 PSPTFVTNYLQSFRSKPA--PPGLEDSVEISEETGKGQLQLGLRAMAKKT--NEGYEDAS 313

Query: 82  RHCTEEIESTSSNHTKALARLLRATVYIFTSQSTKAIEDLTQLVEDTSVDPKIKVNAHIK 141
               + ++       +A A  +R T          A+ DL++ +E   ++P     ++IK
Sbjct: 314 AAFEKALDLGDLGEHEAFAYNMRGTFRYLRGVQLDALSDLSKSIE---LEPDY-TQSYIK 369

Query: 142 RAVVHLHAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALN 201
           RA +HL        A       E+ D +  D YY R Q+  + G+  +A ++  K+I L+
Sbjct: 370 RASMHLELGDKDAAAADFDKAMEQHDDD-PDIYYHRAQLNFILGELSQAAKDYQKSIDLD 428

Query: 202 PNFHVARAQRHFVVHKMIVPGDRERVEQSLKEFRNFVDTHSNVVEACTLFAQVLVDQEDF 261
            +F  +  Q     +KM           S+  FR  +    +V +A   + ++L+DQ+ +
Sbjct: 429 RDFIFSHIQLGVTQYKM------GSTASSMGTFRRTIKAFEDVPDAYNYYGELLLDQQKY 482

Query: 262 DGAEEYFNRSIRVDPENASL------YVHRAMLMLQARGNVDEAIKLIEKAISIDKSCMF 315
           D A   F +++ ++ +   L       +++A+ + Q + +  EA KL EKA+ ID  C  
Sbjct: 483 DEAISQFEKAVELEKQTKPLGMSVLPLINKALALFQWKQDFGEAEKLCEKALIIDPECDI 542

Query: 316 AYETLGTIEVQRGRLEEAVKCFNKALPLARDEAELSHIYSLRDAAIAQMKVCERY 370
           A  T+  + +Q+G++ EA+K F +A  L+R E E+ +  S  +A   Q++V E+Y
Sbjct: 543 AVATMAQLLLQQGKVTEALKYFERAAELSRTEGEIVNALSYAEATRTQLEVQEKY 597


>gi|340517554|gb|EGR47798.1| predicted protein [Trichoderma reesei QM6a]
          Length = 606

 Score =  126 bits (317), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 109/377 (28%), Positives = 184/377 (48%), Gaps = 34/377 (9%)

Query: 7   AQH-AKEEISKRSFFKPSKQFIKTYLKSFPNDPILQPDGLSNGVELTNGDTNESHELDLL 65
           A+H AKE ++ R    PS  F+  YL+SF   P  +P  L + VEL+  DT    +L L 
Sbjct: 231 AEHKAKEVMASRPAKLPSPIFVGNYLQSFRQKP--RPAALDDSVELS-PDTGLG-QLQLG 286

Query: 66  SKAKRAFEHEDYLTAIRHCTEEIESTSSNHTKALARLLRATVYIFTSQSTKAIEDLTQLV 125
            +       E Y  A +   + IE       +ALA  LR T+       T+A +D  + +
Sbjct: 287 FQGLEQKTAEGYEEARQAFEKAIELGDLGEHEALAYNLRGTMRTLLGNHTEATQDFDRSI 346

Query: 126 EDTSVDPKIKVNAHIKRAVVHLH------AASDFTKAFADLDEAEKVDPNVADSYYQRGQ 179
           E   +DPK+   ++IKRA + L       A ++F KA     E +  DP+V   YY R Q
Sbjct: 347 E---LDPKM-TQSYIKRASIFLELGEPDKADAEFAKAL----EQDSEDPDV---YYHRAQ 395

Query: 180 IYCLFGQYEEALRNLDKTIALNPNFHVARAQRHFVVHKMIVPGDRERVEQSLKEFRNFVD 239
            + + G    A ++  K+I L+ +F  +  Q     +KM        +  S+  FR  + 
Sbjct: 396 AHFIKGDLASAQKDYQKSIDLDKDFIFSHIQLGVTQYKM------GSIASSMATFRRCIK 449

Query: 240 THSNVVEACTLFAQVLVDQEDFDGAEEYFNRSIRVDPENASL------YVHRAMLMLQAR 293
               V +    + ++L+DQ +F  A E F+ ++ ++ ++  +       +++A+ + Q+ 
Sbjct: 450 NFPKVPDVYNYYGELLLDQGNFAEAIEKFDTAMEMEKQSKPMSMNVLPLINKALALFQSS 509

Query: 294 GNVDEAIKLIEKAISIDKSCMFAYETLGTIEVQRGRLEEAVKCFNKALPLARDEAELSHI 353
            +  EA KL +KA+ ID  C  A  T+  + +Q+ ++ EA+K F +A  LAR E E+ + 
Sbjct: 510 QDFKEAEKLCQKALIIDPECDIAVATMAQLLLQQNKVTEALKYFERAAELARTEGEIVNA 569

Query: 354 YSLRDAAIAQMKVCERY 370
            S  +A   Q+KV E+Y
Sbjct: 570 LSYAEATRTQVKVTEKY 586


>gi|164660382|ref|XP_001731314.1| hypothetical protein MGL_1497 [Malassezia globosa CBS 7966]
 gi|159105214|gb|EDP44100.1| hypothetical protein MGL_1497 [Malassezia globosa CBS 7966]
          Length = 613

 Score =  126 bits (316), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 100/368 (27%), Positives = 177/368 (48%), Gaps = 31/368 (8%)

Query: 10  AKEEISKRSFFKPSKQFIKTYLKSF-PNDPILQPDGLSNGVELTNGDTNESHELDLLSKA 68
           AK  +S R    PS  F+K YL +F P DP    DG   G +              L +A
Sbjct: 255 AKLILSHREPRLPSPTFVKAYLDAFRPKDPPSIADGAPQGDKT-------------LQRA 301

Query: 69  KRAFEHEDYLTAIRHCTEEI-ESTSSNHTKALARLLRATVYIFTSQSTKAIEDLTQLVED 127
             A + +DY  A+    E I +  SS   +A A  +RAT       + +A+EDL      
Sbjct: 302 YEALQAQDYAHALTLFEEAIKQGLSSKELEANAYNMRATFMFVIGLAKRALEDLDH---S 358

Query: 128 TSVDPKIKVNAHIKRAVVHLHAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQY 187
           T + P   + + +K+A VH+    D   AFAD D A  ++ +  D YY RGQ++ + G++
Sbjct: 359 TDLCPDY-LQSWVKKASVHVELG-DKDAAFADFDRAMAINADDPDIYYHRGQVHFILGEF 416

Query: 188 EEALRNLDKTIALNPNFHVARAQRHFVVHKMIVPGDRERVEQSLKEFRNFVDTHSNVVEA 247
           + AL + +K+ +L+  F  ++ Q     +K+        + +S   F   +    N  E+
Sbjct: 417 DAALSDYEKSTSLDDTFIFSQVQHAVASYKL------GNIARSTAAFCRILKKFENSSES 470

Query: 248 CTLFAQVLVDQEDFDGAEEYFNRSIRVDPE-----NASLYVHRAMLMLQARGNVDEAIKL 302
              F ++++DQ+  + A   FN+SI ++ +     N    +++A+++ Q + ++  A  L
Sbjct: 471 YNYFGELMLDQQRHEDAVANFNKSIELERKKSKGTNVLPMINKALVLFQWKHDLAGAEAL 530

Query: 303 IEKAISIDKSCMFAYETLGTIEVQRGRLEEAVKCFNKALPLARDEAELSHIYSLRDAAIA 362
              A+ ID  C  A  TL  + +Q+ ++ EA++ F ++  +AR E EL +  +   A+ A
Sbjct: 531 CRDALEIDPDCDVAIATLAQLSLQQSKIPEAIEYFRRSADIARTEPELVNAITYEYASRA 590

Query: 363 QMKVCERY 370
           Q++    Y
Sbjct: 591 QLQFIRDY 598



 Score = 45.4 bits (106), Expect = 0.082,   Method: Compositional matrix adjust.
 Identities = 23/72 (31%), Positives = 41/72 (56%), Gaps = 1/72 (1%)

Query: 463 SDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQ 522
            D   AFAD D A  ++ +  D YY RGQ++ + G+++ AL + +K+ +L+  F  ++ Q
Sbjct: 380 GDKDAAFADFDRAMAINADDPDIYYHRGQVHFILGEFDAALSDYEKSTSLDDTFIFSQVQ 439

Query: 523 RHFVWTSTLAEL 534
            H V +  L  +
Sbjct: 440 -HAVASYKLGNI 450


>gi|340914924|gb|EGS18265.1| mitochondrial import receptor subunit-like protein [Chaetomium
           thermophilum var. thermophilum DSM 1495]
          Length = 617

 Score =  126 bits (316), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 105/370 (28%), Positives = 178/370 (48%), Gaps = 27/370 (7%)

Query: 10  AKEEISKRSFFKPSKQFIKTYLKSFPNDPILQPDGLSNGVELTNGDTNESHELDLLSKAK 69
           AKE +  +    PS  F+  YL+SF   P  +P+GL +  E+      E      L +  
Sbjct: 251 AKEILKTKPAKLPSSTFVGNYLQSFRAKP--RPEGLEDDAEI-----EEESGKGQLRRGL 303

Query: 70  RAFEHE---DYLTAIRHCTEEIESTSSNHTKALARLLRATVYIFTSQSTKAIEDLTQLVE 126
           +A E +    Y  A     + +E       +ALA  +R T      +  +A+ DLT+ +E
Sbjct: 304 KALESKTGPGYEEAAEAFEKALELGDLGEYEALAYNMRGTFRNLMGKHEEALADLTKSIE 363

Query: 127 DTSVDPKIKVNAHIKRAVVHLHAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQ 186
              +DP +   ++IKRA ++L   S   KA  D   A   +P   D YY R Q++ + G+
Sbjct: 364 ---LDPSL-TQSYIKRASMNLEQGSP-EKAEEDFAAALAKNPQDPDIYYHRAQLHFIKGE 418

Query: 187 YEEALRNLDKTIALNPNFHVARAQRHFVVHKMIVPGDRERVEQSLKEFRNFVDTHSNVVE 246
           + EA ++  K+I L+ +F  +  Q     +KM        +  S+  FR  +       +
Sbjct: 419 FAEAQKDYQKSIDLDSDFIFSHIQLGVTQYKM------GSIASSMATFRRCIKNFERTPD 472

Query: 247 ACTLFAQVLVDQEDFDGAEEYFNRSIRVDPE------NASLYVHRAMLMLQARGNVDEAI 300
               + ++L+DQ  F  A E F ++I ++ E      N    +++++ + Q + +  EA 
Sbjct: 473 VYNYYGELLLDQGKFTEAIEKFEKAIELEKETKPTCMNVLPLINKSLAVFQWKQDFAEAE 532

Query: 301 KLIEKAISIDKSCMFAYETLGTIEVQRGRLEEAVKCFNKALPLARDEAELSHIYSLRDAA 360
           KL EKA+ ID  C  A  T+  + +Q+G++ EA+K F +A  LAR E EL +  S  +A 
Sbjct: 533 KLCEKALIIDPECDIAVATMAQLLLQQGKVTEALKYFERAAELARTEGELVNALSYAEAT 592

Query: 361 IAQMKVCERY 370
             Q++V E+Y
Sbjct: 593 RTQIQVQEKY 602


>gi|212546809|ref|XP_002153558.1| mitochondrial outer membrane translocase receptor (TOM70), putative
           [Talaromyces marneffei ATCC 18224]
 gi|210065078|gb|EEA19173.1| mitochondrial outer membrane translocase receptor (TOM70), putative
           [Talaromyces marneffei ATCC 18224]
          Length = 624

 Score =  125 bits (314), Expect = 5e-26,   Method: Compositional matrix adjust.
 Identities = 102/367 (27%), Positives = 174/367 (47%), Gaps = 43/367 (11%)

Query: 22  PSKQFIKTYLKSFPNDPILQPDGLSNGVELTNGDTNESHELDLLSKAKRAFEH---EDYL 78
           P   F+  YL+SF   P   P GL +       D +E      L K   A E    E Y 
Sbjct: 262 PGATFVGNYLQSF--RPKTIPAGLDSE------DLDEETGKGQLRKGYLAMEQKTGEGYD 313

Query: 79  TAIRHCTEEIESTSSNHTKALARLLRATVYIFTSQSTKAIEDLTQLVEDTSVDPKIKVNA 138
            A +   + +E       +  A   RAT       +  A+EDL + +E   + P +   +
Sbjct: 314 EAAQAFEKALELGELGEFEGDALNQRATFTYLRGDAQSALEDLNKSIE---IQPSL-TQS 369

Query: 139 HIKRAVVHLH---------AASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEE 189
           +IKRA +HL          A  DF  A A      K DP++   YY R Q++ + G++ E
Sbjct: 370 YIKRASLHLELGKFILCDGAVDDFEAAIAH----NKDDPDI---YYHRAQLHFILGEFAE 422

Query: 190 ALRNLDKTIALNPNFHVARAQRHFVVHKMIVPGDRERVEQSLKEFRNFVDTHSNVVEACT 249
           A ++  K+I L+P+F  +  Q     +K+        V  ++  F+  V    NV +   
Sbjct: 423 AAKDYQKSIDLDPSFIYSHIQLGVTQYKL------GSVASAMATFKRSVKKFENVPDVYN 476

Query: 250 LFAQVLVDQEDFDGAEEYFNRSIRVDPE------NASLYVHRAMLMLQARGNVDEAIKLI 303
            + ++L+DQ+D+ GA E F++++ ++ +      N    +++A+ + Q + +  EA  L 
Sbjct: 477 YYGELLLDQQDYQGAIEKFDKAVEMESKTKPTAINVLPLINKALGIFQWKQDFKEAESLC 536

Query: 304 EKAISIDKSCMFAYETLGTIEVQRGRLEEAVKCFNKALPLARDEAELSHIYSLRDAAIAQ 363
           +KA+ ID  C  A  T+  + +Q+G++ EA+K F +A  LAR E E+ +  S  +A   Q
Sbjct: 537 QKALIIDPECDIAVGTMAQLLLQQGKVAEALKYFTRAAELARTEGEVINAISYAEATRTQ 596

Query: 364 MKVCERY 370
           ++V E+Y
Sbjct: 597 LEVQEKY 603


>gi|154310443|ref|XP_001554553.1| hypothetical protein BC1G_07142 [Botryotinia fuckeliana B05.10]
          Length = 616

 Score =  125 bits (314), Expect = 6e-26,   Method: Compositional matrix adjust.
 Identities = 95/355 (26%), Positives = 169/355 (47%), Gaps = 21/355 (5%)

Query: 22  PSKQFIKTYLKSFPNDPILQPDGLSNGVELTNGDTNESHELDLLSKAKRAFEHEDYLTAI 81
           PS  F+  YL+SF + P   P GL +  EL+        +L L + AK+   +E Y  A 
Sbjct: 258 PSPTFVTNYLQSFRSKPA--PAGLEDSAELSEETGKGQLQLGLRAMAKKT--NEGYEDAS 313

Query: 82  RHCTEEIESTSSNHTKALARLLRATVYIFTSQSTKAIEDLTQLVEDTSVDPKIKVNAHIK 141
               + ++       +A A  +R T          A+ DL++ +E   + P     ++IK
Sbjct: 314 AAFEKALDLGDLGEHEAFAYNMRGTFRYLRGVQIDALSDLSKSIE---LSPDY-TQSYIK 369

Query: 142 RAVVHLHAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALN 201
           RA +HL        A       E+ D +  D YY R Q+  + G+  +A ++  K+I L+
Sbjct: 370 RASMHLELGDKDAAAADFDKAMEQHDDD-PDIYYHRAQLNFILGELSQAAKDYQKSIDLD 428

Query: 202 PNFHVARAQRHFVVHKMIVPGDRERVEQSLKEFRNFVDTHSNVVEACTLFAQVLVDQEDF 261
            +F  +  Q     +KM           S+  FR  +    +V +A   + ++L+DQ+ +
Sbjct: 429 RDFIFSHIQLGVTQYKM------GSTASSMGTFRRTIKAFEDVPDAYNYYGELLLDQQKY 482

Query: 262 DGAEEYFNRSIRVDPENASL------YVHRAMLMLQARGNVDEAIKLIEKAISIDKSCMF 315
           D A   F +++ ++ +   L       +++A+ + Q + +  EA KL EKA+ ID  C  
Sbjct: 483 DEAISQFEKAVELEKQTKPLGMSVLPLINKALALFQWKQDFSEAEKLCEKALIIDPECDI 542

Query: 316 AYETLGTIEVQRGRLEEAVKCFNKALPLARDEAELSHIYSLRDAAIAQMKVCERY 370
           A  T+  + +Q+G++ EA+K F +A  L+R E E+ +  S  +A   Q++V E+Y
Sbjct: 543 AVATMAQLLLQQGKVTEALKYFERAAELSRTEGEIVNALSYAEATRTQLEVQEKY 597


>gi|402218082|gb|EJT98160.1| mitochondrial outer membrane translocase receptor TOM70
           [Dacryopinax sp. DJM-731 SS1]
          Length = 623

 Score =  125 bits (313), Expect = 7e-26,   Method: Compositional matrix adjust.
 Identities = 105/367 (28%), Positives = 170/367 (46%), Gaps = 32/367 (8%)

Query: 12  EEISKRSFFKPSKQFIKTYLKSF-PNDPILQPDGLSNGVELTNGDTNESHELDLLSKAKR 70
           E +S R    PS  FI +YL +F P+     P+  S G             LDL   A  
Sbjct: 265 EILSSREPRLPSMTFISSYLAAFRPHPKPALPENPSQG----------DKTLDL---AFD 311

Query: 71  AFEHEDYLTAIRHCTEEIEST-SSNHTKALARLLRATVYIFTSQSTKAIEDLTQLVEDTS 129
           A E  DY  A    +E IE   S+ H KA A  LR T      +++ A  D+   +E   
Sbjct: 312 ALEAADYQHAFTLASEAIEQVPSTAHAKAEALNLRGTFKFILGEASGARADMLASIE--- 368

Query: 130 VDPKIKVNAHIKRAVVHLHAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEE 189
            DP +     +K A VH+   +D   AFA  ++A + + +  D YY RGQ++ + G Y+ 
Sbjct: 369 ADPTL-TQTWVKIASVHMEL-NDSDAAFAAFEKALEYNKDDPDIYYHRGQVHFIMGNYDA 426

Query: 190 ALRNLDKTIALNPNFHVARAQRHFVVHKMIVPGDRERVEQSLKEFRNFVDTHSNVVEACT 249
           A  + +K++AL+PNF     Q     +K      +  + QS+ +FR  +       E   
Sbjct: 427 ASEDYEKSVALDPNFVFTHIQLAVAKYK------QGNIPQSMAKFRAAMRQFPQNSEPQN 480

Query: 250 LFAQVLVDQEDFDGAEEYFNRSIRVDPE------NASLYVHRAMLMLQARGNVDEAIKLI 303
            + ++L+DQ+ F  A E F+R+I ++ +      N    V++A+ + Q + +      L 
Sbjct: 481 YYGELLLDQQRFQDAVEKFDRAIELERQKPRQRMNVLPLVNKALTIYQWKQDTSAPEALC 540

Query: 304 EKAISIDKSCMFAYETLGTIEVQRGRLEEAVKCFNKALPLARDEAELSHIYSLRDAAIAQ 363
            +A+ ID  C  A  TL    +Q G+L+ A++ F K   +AR   +L +  + + A  AQ
Sbjct: 541 REALEIDPECDAAVGTLAQFSLQTGKLDNAIEMFKKGAEIARTAPDLENALTYQYATQAQ 600

Query: 364 MKVCERY 370
           M+    Y
Sbjct: 601 MQFVREY 607



 Score = 45.8 bits (107), Expect = 0.063,   Method: Compositional matrix adjust.
 Identities = 20/54 (37%), Positives = 35/54 (64%)

Query: 463 SDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNF 516
           +D   AFA  ++A + + +  D YY RGQ++ + G Y+ A  + +K++AL+PNF
Sbjct: 388 NDSDAAFAAFEKALEYNKDDPDIYYHRGQVHFIMGNYDAASEDYEKSVALDPNF 441


>gi|347828761|emb|CCD44458.1| similar to mitochondrial precursor protein import receptor tom70
           [Botryotinia fuckeliana]
          Length = 616

 Score =  125 bits (313), Expect = 7e-26,   Method: Compositional matrix adjust.
 Identities = 95/355 (26%), Positives = 169/355 (47%), Gaps = 21/355 (5%)

Query: 22  PSKQFIKTYLKSFPNDPILQPDGLSNGVELTNGDTNESHELDLLSKAKRAFEHEDYLTAI 81
           PS  F+  YL+SF + P   P GL +  EL+        +L L + AK+   +E Y  A 
Sbjct: 258 PSPTFVTNYLQSFRSKPA--PAGLEDSAELSEETGKGQLQLGLRAMAKKT--NEGYEDAS 313

Query: 82  RHCTEEIESTSSNHTKALARLLRATVYIFTSQSTKAIEDLTQLVEDTSVDPKIKVNAHIK 141
               + ++       +A A  +R T          A+ DL++ +E   + P     ++IK
Sbjct: 314 AAFEKALDLGDLGEHEAFAYNMRGTFRYLRGVQIDALSDLSKSIE---LSPDY-TQSYIK 369

Query: 142 RAVVHLHAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALN 201
           RA +HL        A       E+ D +  D YY R Q+  + G+  +A ++  K+I L+
Sbjct: 370 RASMHLELGDKDAAAADFDKAMEQHDDD-PDIYYHRAQLNFILGELSQAAKDYQKSIDLD 428

Query: 202 PNFHVARAQRHFVVHKMIVPGDRERVEQSLKEFRNFVDTHSNVVEACTLFAQVLVDQEDF 261
            +F  +  Q     +KM           S+  FR  +    +V +A   + ++L+DQ+ +
Sbjct: 429 RDFIFSHIQLGVTQYKM------GSTASSMGTFRRTIKAFEDVPDAYNYYGELLLDQQKY 482

Query: 262 DGAEEYFNRSIRVDPENASL------YVHRAMLMLQARGNVDEAIKLIEKAISIDKSCMF 315
           D A   F +++ ++ +   L       +++A+ + Q + +  EA KL EKA+ ID  C  
Sbjct: 483 DEAISQFEKAVELEKQTKPLGMSVLPLINKALALFQWKQDFSEAEKLCEKALIIDPECDI 542

Query: 316 AYETLGTIEVQRGRLEEAVKCFNKALPLARDEAELSHIYSLRDAAIAQMKVCERY 370
           A  T+  + +Q+G++ EA+K F +A  L+R E E+ +  S  +A   Q++V E+Y
Sbjct: 543 AVATMAQLLLQQGKVTEALKYFERAAELSRTEGEIVNALSYAEATRTQLEVQEKY 597


>gi|403176115|ref|XP_003334827.2| hypothetical protein PGTG_16168 [Puccinia graminis f. sp. tritici
           CRL 75-36-700-3]
 gi|375172109|gb|EFP90408.2| hypothetical protein PGTG_16168 [Puccinia graminis f. sp. tritici
           CRL 75-36-700-3]
          Length = 654

 Score =  124 bits (312), Expect = 9e-26,   Method: Compositional matrix adjust.
 Identities = 103/371 (27%), Positives = 176/371 (47%), Gaps = 26/371 (7%)

Query: 6   GAQHAKEEISKRSFFKPSKQFIKTYLKSFPNDPILQPDGLSNGVELTNGDTNESHELDLL 65
             + AK  I +R    PS   I+ YL +F   P  +P   S   E    D       D L
Sbjct: 294 AGEKAKSIIKERGPRLPSNMIIRAYLDAFRQKP--KP---SLPPEPNQADNTLMMAYDAL 348

Query: 66  SKAKRAFEHEDYLTAIRHCTEEIESTSSNHTKALARLLRATVYIFTSQSTKAIEDLTQLV 125
           +     F++    +      E++ ST+    +A   L++AT     SQ   A+ED  + +
Sbjct: 349 AN----FDYNHACSLFHEAVEQVPSTT--ELRAHGYLMKATFLFLMSQPQAALEDFNRAL 402

Query: 126 EDTSVDPKIKVNAHIKRAVVHLHAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFG 185
           E+    P + + A I++A V++   S    A  D  EA K+D N  D YY RGQ+Y +  
Sbjct: 403 EE---KPDL-IQAWIRKASVNMELGS-LETAMNDFAEALKIDVNDPDVYYHRGQVYNVTE 457

Query: 186 QYEEALRNLDKTIALNPNFHVARAQRHFVVHKMIVPGDRERVEQSLKEFRNFVDTH-SNV 244
           Q+  ++ +  ++I L+P+F  +  Q     +K    GD  +  Q  KE+   VD H ++ 
Sbjct: 458 QHHLSIEDYRRSIDLDPSFIFSHVQLAVATYKN---GDVPKAMQMFKEYM-VVDGHETSS 513

Query: 245 VEACTLFAQVLVDQEDFDGAEEYFNRSI-----RVDPENASLYVHRAMLMLQARGNVDEA 299
            E    + ++L  ++ FD A + F+ +I     R  P+N   +V++A++   A+ +V +A
Sbjct: 514 PEVHNYYGELLFAEQKFDEALKRFDSAIQLEENRTGPKNVLPWVNKALVYATAQSDVAKA 573

Query: 300 IKLIEKAISIDKSCMFAYETLGTIEVQRGRLEEAVKCFNKALPLARDEAELSHIYSLRDA 359
            +   KA+ ID +C  A + L   ++Q   ++EA+K + K + +A  E  LS       A
Sbjct: 574 TESCMKALEIDSNCEVAIQHLAQFKLQSNEIKEALKWYEKGIEVAMTELGLSQFIQFHVA 633

Query: 360 AIAQMKVCERY 370
           A+AQ+   E Y
Sbjct: 634 AMAQLVFMENY 644



 Score = 41.2 bits (95), Expect = 1.3,   Method: Compositional matrix adjust.
 Identities = 20/55 (36%), Positives = 32/55 (58%)

Query: 468 AFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQ 522
           A  D  EA K+D N  D YY RGQ+Y +  Q+  ++ +  ++I L+P+F  +  Q
Sbjct: 428 AMNDFAEALKIDVNDPDVYYHRGQVYNVTEQHHLSIEDYRRSIDLDPSFIFSHVQ 482


>gi|331248908|ref|XP_003337075.1| hypothetical protein PGTG_18834 [Puccinia graminis f. sp. tritici
           CRL 75-36-700-3]
 gi|309316065|gb|EFP92656.1| hypothetical protein PGTG_18834 [Puccinia graminis f. sp. tritici
           CRL 75-36-700-3]
          Length = 616

 Score =  124 bits (312), Expect = 9e-26,   Method: Compositional matrix adjust.
 Identities = 103/371 (27%), Positives = 176/371 (47%), Gaps = 26/371 (7%)

Query: 6   GAQHAKEEISKRSFFKPSKQFIKTYLKSFPNDPILQPDGLSNGVELTNGDTNESHELDLL 65
             + AK  I +R    PS   I+ YL +F   P  +P   S   E    D       D L
Sbjct: 256 AGEKAKSIIKERGPRLPSNMIIRAYLDAFRQKP--KP---SLPPEPNQADNTLMMAYDAL 310

Query: 66  SKAKRAFEHEDYLTAIRHCTEEIESTSSNHTKALARLLRATVYIFTSQSTKAIEDLTQLV 125
           +     F++    +      E++ ST+    +A   L++AT     SQ   A+ED  + +
Sbjct: 311 AN----FDYNHACSLFHEAVEQVPSTT--ELRAHGYLMKATFLFLMSQPQAALEDFNRAL 364

Query: 126 EDTSVDPKIKVNAHIKRAVVHLHAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFG 185
           E+    P + + A I++A V++   S    A  D  EA K+D N  D YY RGQ+Y +  
Sbjct: 365 EEK---PDL-IQAWIRKASVNMELGS-LETAMNDFAEALKIDVNDPDVYYHRGQVYNVTE 419

Query: 186 QYEEALRNLDKTIALNPNFHVARAQRHFVVHKMIVPGDRERVEQSLKEFRNFVDTH-SNV 244
           Q+  ++ +  ++I L+P+F  +  Q     +K    GD  +  Q  KE+   VD H ++ 
Sbjct: 420 QHHLSIEDYRRSIDLDPSFIFSHVQLAVATYKN---GDVPKAMQMFKEYM-VVDGHETSS 475

Query: 245 VEACTLFAQVLVDQEDFDGAEEYFNRSI-----RVDPENASLYVHRAMLMLQARGNVDEA 299
            E    + ++L  ++ FD A + F+ +I     R  P+N   +V++A++   A+ +V +A
Sbjct: 476 PEVHNYYGELLFAEQKFDEALKRFDSAIQLEENRTGPKNVLPWVNKALVYATAQSDVAKA 535

Query: 300 IKLIEKAISIDKSCMFAYETLGTIEVQRGRLEEAVKCFNKALPLARDEAELSHIYSLRDA 359
            +   KA+ ID +C  A + L   ++Q   ++EA+K + K + +A  E  LS       A
Sbjct: 536 TESCMKALEIDSNCEVAIQHLAQFKLQSNEIKEALKWYEKGIEVAMTELGLSQFIQFHVA 595

Query: 360 AIAQMKVCERY 370
           A+AQ+   E Y
Sbjct: 596 AMAQLVFMENY 606



 Score = 41.2 bits (95), Expect = 1.5,   Method: Compositional matrix adjust.
 Identities = 20/55 (36%), Positives = 32/55 (58%)

Query: 468 AFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQ 522
           A  D  EA K+D N  D YY RGQ+Y +  Q+  ++ +  ++I L+P+F  +  Q
Sbjct: 390 AMNDFAEALKIDVNDPDVYYHRGQVYNVTEQHHLSIEDYRRSIDLDPSFIFSHVQ 444


>gi|322706857|gb|EFY98436.1| mitochondrial outer membrane 72K protein [Metarhizium anisopliae
           ARSEF 23]
          Length = 622

 Score =  124 bits (312), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 105/377 (27%), Positives = 181/377 (48%), Gaps = 34/377 (9%)

Query: 7   AQH-AKEEISKRSFFKPSKQFIKTYLKSFPNDPILQPDGLSNGVELTNGDTNESHELDLL 65
           A+H AKE ++ R    PS  F+  YL+SF      +P GL + VEL         ++ L 
Sbjct: 247 AEHRAKEMMASRPPKLPSPIFVGNYLQSFRQKG--RPAGLEDSVELDAETGKGQLQIGLQ 304

Query: 66  SKAKRAFEHEDYLTAIRHCTEEIESTSSNHTKALARLLRATVYIFTSQSTKAIEDLTQLV 125
              K+    E Y  A +   + +E       +ALA  LR T+        +A ED  + +
Sbjct: 305 GLEKKT--GEGYEEARQAFEKALELGDLGEYEALAYNLRGTMRTLLGNHAEATEDFDKSI 362

Query: 126 EDTSVDPKIKVNAHIKRAVVHLH------AASDFTKAFADLDEAEKVDPNVADSYYQRGQ 179
           E   +DP + + ++IKRA + L       A ++F KA     E +K DP+V   YY R Q
Sbjct: 363 E---LDPGM-IQSYIKRASISLELGEPDKADAEFAKAL----EQDKDDPDV---YYHRAQ 411

Query: 180 IYCLFGQYEEALRNLDKTIALNPNFHVARAQRHFVVHKMIVPGDRERVEQSLKEFRNFVD 239
              + G   EA ++  K+I L+ +F  +  Q     +KM        +  S+  FR  + 
Sbjct: 412 ASFIKGDLAEAQKDYQKSIDLDKDFIFSHIQLGVTQYKM------GSIASSMATFRRCIK 465

Query: 240 THSNVVEACTLFAQVLVDQEDFDGAEEYFNRSIRVDPENASL------YVHRAMLMLQAR 293
               V +    + ++L+DQ +F  A E F+ ++ ++ +   +       +++A+ + Q +
Sbjct: 466 NFPKVPDVYNYYGELLLDQSNFSEAVEKFDTAMEMEKQTKPMSMNVLPLINKALALFQWK 525

Query: 294 GNVDEAIKLIEKAISIDKSCMFAYETLGTIEVQRGRLEEAVKCFNKALPLARDEAELSHI 353
            +  EA +L +KA+ ID  C  A  T+  + +Q+ ++ EA+K F +A  LAR E E+ + 
Sbjct: 526 QDFKEAEQLCQKALIIDPECDIAVATMAQLLLQQNKVTEALKYFERAAELARTEGEIVNA 585

Query: 354 YSLRDAAIAQMKVCERY 370
            S  +A   Q++V E+Y
Sbjct: 586 LSYAEATRTQVQVTEKY 602


>gi|378732314|gb|EHY58773.1| mitochondrial import receptor subunit tom-70 [Exophiala
           dermatitidis NIH/UT8656]
          Length = 623

 Score =  124 bits (312), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 97/363 (26%), Positives = 173/363 (47%), Gaps = 36/363 (9%)

Query: 22  PSKQFIKTYLKSF-PNDPILQPDGLSNGVELTNGDTNESHELDLLSKAKRAFEHEDYLTA 80
           PS  F+  YL+SF P  P   P GL    EL         +  L++  K+    + Y  A
Sbjct: 261 PSATFVSNYLQSFRPRPP---PAGLEESAELDENTGKGQLQRGLIAMKKKT--AQGYEEA 315

Query: 81  IRHCTEEIESTSSNHTKALARLLRATVYIFTSQSTKAIEDLTQLVEDTSVDPKIKVNAHI 140
                + +E       +A    +RAT       + KA+EDLT+ +E   + P +   A+I
Sbjct: 316 AEAFKKAVELNELGEHEAFGLNMRATFLYLEGDTAKALEDLTKAIE---LQPSL-TQAYI 371

Query: 141 KRAVVHLH------AASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNL 194
           KRA + L       A+ DF KA A      K DP++   YY R Q++ + G++ +A ++ 
Sbjct: 372 KRASMQLELGNKDLASEDFEKAVAQ----NKDDPDI---YYHRAQLHFILGEFADAAKDY 424

Query: 195 DKTIALNPNFHVARAQRHFVVHKMIVPGDRERVEQSLKEFRNFVDTHSNVVEACTLFAQV 254
            K+I L+ +F  +  Q     +KM        +  S+  FR  +     V +    + ++
Sbjct: 425 QKSIDLDRDFIYSHIQLGVTQYKM------GSIASSMATFRRCIKNFDKVPDVYNYYGEL 478

Query: 255 LVDQEDFDGAEEYFNRSIRVDPE-------NASLYVHRAMLMLQARGNVDEAIKLIEKAI 307
           L+DQ+ +  A E F+ SI ++ +       N    +++A+ + Q + +   A +L EKA+
Sbjct: 479 LLDQQKYQEAIERFDTSIEMERQTKPTGAINVLPLINKALALYQWKQDFKAAEELCEKAL 538

Query: 308 SIDKSCMFAYETLGTIEVQRGRLEEAVKCFNKALPLARDEAELSHIYSLRDAAIAQMKVC 367
            +D  C  A  T+  + +Q+G++  A++ F +A  L+R E E+ +  S  +A   Q++V 
Sbjct: 539 ILDPECDIAVATMAQLLLQQGKVVRALEYFERAAELSRTEGEIVNALSYAEATRTQLEVS 598

Query: 368 ERY 370
           ++Y
Sbjct: 599 QKY 601


>gi|425765509|gb|EKV04186.1| Mitochondrial outer membrane translocase receptor (TOM70), putative
           [Penicillium digitatum PHI26]
 gi|425783465|gb|EKV21313.1| Mitochondrial outer membrane translocase receptor (TOM70), putative
           [Penicillium digitatum Pd1]
          Length = 622

 Score =  124 bits (312), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 101/361 (27%), Positives = 176/361 (48%), Gaps = 33/361 (9%)

Query: 22  PSKQFIKTYLKSFPNDPILQPDGLSNGVELTNGDTNESHELDLLSKAKRAFEHEDYLTAI 81
           PS  F+  YL+SF   P   P+GL   VEL++          LL+  K+    + Y  A 
Sbjct: 263 PSATFVSNYLQSF--RPQALPEGLEESVELSDESGLGQLRKGLLAMGKKT--ADGYEEAA 318

Query: 82  RHCTEEIESTSSNHTKALARLLRATVYIFTSQSTKAIEDLTQLVEDTSVDPKIKVNAHIK 141
                 +E       + LA  +RAT       +T A+ DL + VE   + P + V ++IK
Sbjct: 319 AAFEMALELGELGEFEGLALNMRATFTYLGGNATDALADLDKSVE---LSPSL-VQSYIK 374

Query: 142 RAVVHLH------AASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLD 195
           RA +HL       AA DF  A        K DP++   YY R Q++ +  +  EA ++  
Sbjct: 375 RASLHLELGNKDAAADDFELAITH----NKDDPDI---YYHRAQLHFILTELAEAAKDYQ 427

Query: 196 KTIALNPNFHVARAQRHFVVHKMIVPGDRERVEQSLKEFRNFVDTHSNVVEACTLFAQVL 255
           K+I L+ +F  +  Q     +KM        V  ++  FR  V     V +    + ++L
Sbjct: 428 KSIDLDRSFIYSHIQLGVTQYKM------GSVASAMATFRRTVKNFEEVPDVYNYYGELL 481

Query: 256 VDQEDFDGAEEYFNRSIRVDPENASL------YVHRAMLMLQARGNVDEAIKLIEKAISI 309
           +DQ+++  A E F++++ ++ ++  +       +++A+ + Q + +  EA  L +KA+ I
Sbjct: 482 LDQQNYSEAIEKFDKAVEMEKQSKPMGINVLPLINKALALFQWKHDFQEAENLCQKALII 541

Query: 310 DKSCMFAYETLGTIEVQRGRLEEAVKCFNKALPLARDEAELSHIYSLRDAAIAQMKVCER 369
           D  C  A  T+  + +Q+G++ +A+K F +A  LAR EAE+ +  S  +A   Q++V E+
Sbjct: 542 DPECDIAVGTMAQLLLQQGKVSKALKYFERAAELARTEAEIINAISYAEATRTQLEVQEK 601

Query: 370 Y 370
           Y
Sbjct: 602 Y 602



 Score = 40.8 bits (94), Expect = 2.1,   Method: Compositional matrix adjust.
 Identities = 24/77 (31%), Positives = 41/77 (53%), Gaps = 4/77 (5%)

Query: 460 HAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALN---PNF 516
           +   + T A ADLD++ ++ P++  SY +R  ++   G  + A  + +  I  N   P+ 
Sbjct: 346 YLGGNATDALADLDKSVELSPSLVQSYIKRASLHLELGNKDAAADDFELAITHNKDDPDI 405

Query: 517 HVARAQRHFVWTSTLAE 533
           +  RAQ HF+ T  LAE
Sbjct: 406 YYHRAQLHFILTE-LAE 421


>gi|443894954|dbj|GAC72300.1| translocase of outer mitochondrial membrane complex, subunit
           TOM70/TOM72 [Pseudozyma antarctica T-34]
          Length = 654

 Score =  124 bits (311), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 97/357 (27%), Positives = 175/357 (49%), Gaps = 33/357 (9%)

Query: 22  PSKQFIKTYLKSF--PNDPILQPDGLSNGVELTNGDTNESHELDLLSKAKRAFEHEDYLT 79
           PS  F+  YL++F   + P L P+  S G E              L KA  A E + Y  
Sbjct: 309 PSPTFVTAYLEAFRAKSKPEL-PEQPSQGDET-------------LLKAYGALEAKSYPH 354

Query: 80  AIRHCTEEIESTSSNH-TKALARLLRATVYIFTSQSTKAIEDLTQLVEDTSVDPKIKVNA 138
           A     E IE   SN   +A A  +R T       + +A+ DL +    T++ PK  V +
Sbjct: 355 AFTLFNEAIEQGLSNEDLEANAYNMRGTFKFVIGNAKEALADLER---STTLRPKY-VQS 410

Query: 139 HIKRAVVHLHAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTI 198
            +K+A VH+   SD   AF D D A + D    D YY RGQ+  + G+++ A+++ +K+ 
Sbjct: 411 WVKKASVHMEL-SDKEAAFKDFDRAIEADAEDPDIYYHRGQVNFILGEFDAAIKDYEKST 469

Query: 199 ALNPNFHVARAQRHFVVHKMIVPGDRERVEQSLKEFRNFVDTHSNVVEACTLFAQVLVDQ 258
           +L+  F  ++ Q     +K         +  S   FR  +       EA   + ++L+DQ
Sbjct: 470 SLDDTFIFSQVQYAVAHYK------NGNIGHSTAAFRKLLRNFDTSSEAYNYYGELLLDQ 523

Query: 259 EDFDGAEEYFNRSIRVD-----PENASLYVHRAMLMLQARGNVDEAIKLIEKAISIDKSC 313
           + F+ A E F+++I ++       N    +++A+ + Q + ++  A +L  +A+  D+ C
Sbjct: 524 QKFEEAMEKFDKAIEIEGAKQGSTNVLPMINKALALFQWKQDITAAEELCRQALDKDEDC 583

Query: 314 MFAYETLGTIEVQRGRLEEAVKCFNKALPLARDEAELSHIYSLRDAAIAQMKVCERY 370
             A  TL  + +Q+G++++A++ F ++  +AR E EL +  +  +A+ AQ+K  + +
Sbjct: 584 DVAVATLAQLSLQQGKIQDAIEYFERSAKIARTEPELINALTYENASRAQLKFIQEF 640



 Score = 43.1 bits (100), Expect = 0.39,   Method: Compositional matrix adjust.
 Identities = 20/60 (33%), Positives = 35/60 (58%)

Query: 463 SDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQ 522
           SD   AF D D A + D    D YY RGQ+  + G+++ A+++ +K+ +L+  F  ++ Q
Sbjct: 422 SDKEAAFKDFDRAIEADAEDPDIYYHRGQVNFILGEFDAAIKDYEKSTSLDDTFIFSQVQ 481


>gi|345562082|gb|EGX45154.1| hypothetical protein AOL_s00173g255 [Arthrobotrys oligospora ATCC
           24927]
          Length = 634

 Score =  123 bits (308), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 101/355 (28%), Positives = 170/355 (47%), Gaps = 23/355 (6%)

Query: 22  PSKQFIKTYLKSFPNDPILQPDGLSNGVELTNGDTNESHELDLLSKAKRAFEHEDYLTAI 81
           PS  F+  YL+SF   P   P+GL +  +   GD   +  L  + K K A  +ED   A 
Sbjct: 276 PSPTFVTNYLQSFREKPA--PEGLEDATDENTGDYWLNKGLQDI-KIKTAQSYED---AA 329

Query: 82  RHCTEEIESTSSNHTKALARLLRATVYIFTSQSTKAIEDLTQLVEDTSVDPKIKVNAHIK 141
           +   + +E   S   +A A  +R T       S  A+ D+TQ +E    DPK+   ++IK
Sbjct: 330 QAFDKALELGVSEKYQAFAYNMRGTFKYLKGDSADALADITQSIE---FDPKL-TQSYIK 385

Query: 142 RAVVHLHAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALN 201
           RA + L    D   A  D   A   +P+  D YY R Q++ +  +Y EA R+  K+I L+
Sbjct: 386 RASMILETG-DKQGAEEDFQRAISQNPDDPDIYYHRAQLHFITLEYSEAARDYQKSIDLD 444

Query: 202 PNFHVARAQRHFVVHKMIVPGDRERVEQSLKEFRNFVDTHSNVVEACTLFAQVLVDQEDF 261
            +F  +  Q     +K      +  +  S+  FR          +    + ++L+DQ  +
Sbjct: 445 RDFIYSHIQLGVTQYK------QGSIASSMATFRRCEKKFEKNPDVYNYYGELLLDQSKY 498

Query: 262 DGAEEYFNRSIRVDPE------NASLYVHRAMLMLQARGNVDEAIKLIEKAISIDKSCMF 315
           + A   F+++I ++ E      N    +++A+   Q + N +EA K  + A+ +D  C  
Sbjct: 499 EEAIGKFDQAINMEKEARPMGMNVLPLINKALATFQWKQNYEEAEKYCKTALILDPDCDI 558

Query: 316 AYETLGTIEVQRGRLEEAVKCFNKALPLARDEAELSHIYSLRDAAIAQMKVCERY 370
           A  TL  + +Q+GR+ EA++ F +A  LAR E E+ +  S  +A   Q++V E+Y
Sbjct: 559 AIATLAQLLLQQGRVAEALEYFERAADLARTEGEIVNALSYAEATRTQLEVQEKY 613


>gi|67901400|ref|XP_680956.1| hypothetical protein AN7687.2 [Aspergillus nidulans FGSC A4]
 gi|40742683|gb|EAA61873.1| hypothetical protein AN7687.2 [Aspergillus nidulans FGSC A4]
 gi|259484029|tpe|CBF79904.1| TPA: mitochondrial outer membrane translocase receptor (TOM70),
           putative (AFU_orthologue; AFUA_2G01660) [Aspergillus
           nidulans FGSC A4]
          Length = 636

 Score =  122 bits (307), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 99/362 (27%), Positives = 175/362 (48%), Gaps = 34/362 (9%)

Query: 22  PSKQFIKTYLKSFPNDPILQPDGLSNGVELTNGDTNESHELDLLSKAKRAFEHEDYLTAI 81
           PS  F+  YL+SF   P   P+GL    ++            LL+ AK+    + Y  A 
Sbjct: 276 PSPTFVSNYLQSF--RPKSLPEGLDESADIPEESGKGQLRKGLLAMAKKT--GDGYEEAA 331

Query: 82  RHCTEEIESTSSNHTKALARLLRATVYIFTSQSTKAIEDLTQLVEDTSVDPKIKVNAHIK 141
               + +E       + LA   RAT       +  A+ DL + VE   +DP + V ++IK
Sbjct: 332 AAFVKALELGDLGEFEGLALNQRATFTYLQGNAHNALADLNKSVE---LDPSL-VQSYIK 387

Query: 142 RAVVHLH------AASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLD 195
           RA +HL       A  DF  A        K DP++   YY R Q++ + G++ EA ++  
Sbjct: 388 RASLHLELGNKDAAQDDFELAITH----NKDDPDI---YYHRAQLHFILGEFAEAAKDYQ 440

Query: 196 KTIALNPNFHVARAQRHFVVHKMIVPGDRERVEQSLKEFRNFVDTHSNVVEACTLFAQVL 255
           K+I L+  F  +  Q     +KM        V  ++  FR  V    +V +    + ++L
Sbjct: 441 KSIDLDRTFIYSHIQLGVTQYKM------GSVASAMATFRRSVKNFEDVPDVYNYYGELL 494

Query: 256 VDQEDFDGAEEYFNRSIRVDPENASL------YVHRAMLMLQARGNVDEAIKLIEKA-IS 308
           +DQ++F  A E F++++ ++ ++  +       +++A+ + Q + +  EA +L +KA I 
Sbjct: 495 LDQQNFSEAIEKFDKAVEMEKQSKPMSINVLPLINKALALFQWKHDFAEAEQLCQKALII 554

Query: 309 IDKSCMFAYETLGTIEVQRGRLEEAVKCFNKALPLARDEAELSHIYSLRDAAIAQMKVCE 368
           +D  C  A  T+  + +Q+G++ +A+K F +A  LAR E E+ +  S  +A   Q++V E
Sbjct: 555 VDPECDIAVGTMAQLLLQQGKVSQALKYFERAAELARTEPEIVNAISYAEATRTQLEVQE 614

Query: 369 RY 370
           +Y
Sbjct: 615 KY 616


>gi|358388729|gb|EHK26322.1| hypothetical protein TRIVIDRAFT_86350 [Trichoderma virens Gv29-8]
          Length = 605

 Score =  122 bits (306), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 107/377 (28%), Positives = 182/377 (48%), Gaps = 34/377 (9%)

Query: 7   AQH-AKEEISKRSFFKPSKQFIKTYLKSFPNDPILQPDGLSNGVELTNGDTNESHELDLL 65
           A+H AKE ++ R    PS  F+  YL+SF   P  +P  L + VEL   DT    +L L 
Sbjct: 230 AEHKAKEVMASRPAKLPSPIFVGNYLQSFRQKP--RPAALDDSVELPL-DTGLG-QLQLG 285

Query: 66  SKAKRAFEHEDYLTAIRHCTEEIESTSSNHTKALARLLRATVYIFTSQSTKAIEDLTQLV 125
            +       E Y  A +   + IE  +    +ALA  LR T+        +A +D  + +
Sbjct: 286 FQGLEQKTAEGYEEARQAFEKAIELGNLGEHEALAYNLRGTMRTLLGNHAEATQDFDRSI 345

Query: 126 EDTSVDPKIKVNAHIKRAVVHLH------AASDFTKAFADLDEAEKVDPNVADSYYQRGQ 179
           E   +DP +   ++IKRA + L       A ++F KA     E +  DP+V   YY R Q
Sbjct: 346 E---LDPTM-TQSYIKRASISLELGEPDKADAEFAKAL----EQDNDDPDV---YYHRAQ 394

Query: 180 IYCLFGQYEEALRNLDKTIALNPNFHVARAQRHFVVHKMIVPGDRERVEQSLKEFRNFVD 239
            + + G    A ++  K+I L+ +F  +  Q     +KM        +  S+  FR  + 
Sbjct: 395 AHFIKGDLASAQKDYQKSIDLDKDFIFSHIQLGVTQYKM------GSIASSMATFRRCIK 448

Query: 240 THSNVVEACTLFAQVLVDQEDFDGAEEYFNRSIRVDPENASL------YVHRAMLMLQAR 293
               V +    + ++L+DQ +F  A E F+ ++ ++ ++  +       +++A+ + Q+ 
Sbjct: 449 NFPKVPDVYNYYGELLLDQGNFPEAIEKFDTAMEMEKQSKPMSMNVLPLINKALALFQSS 508

Query: 294 GNVDEAIKLIEKAISIDKSCMFAYETLGTIEVQRGRLEEAVKCFNKALPLARDEAELSHI 353
            +  EA KL +KA+ ID  C  A  T+  + +Q+ ++ EA+K F +A  LAR E E+ + 
Sbjct: 509 SDFKEAEKLCQKALIIDPECDIAVATMAQLLLQQNKVTEALKYFERAAELARTEGEIVNA 568

Query: 354 YSLRDAAIAQMKVCERY 370
            S  +A   Q+KV E+Y
Sbjct: 569 LSYAEATRTQVKVTEKY 585


>gi|145506301|ref|XP_001439116.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
 gi|124406290|emb|CAK71719.1| unnamed protein product [Paramecium tetraurelia]
          Length = 815

 Score =  122 bits (305), Expect = 6e-25,   Method: Compositional matrix adjust.
 Identities = 115/459 (25%), Positives = 206/459 (44%), Gaps = 59/459 (12%)

Query: 75  EDYLTAIRHCTEEIESTSSNHTKALARLLRATVYIFTSQSTKAIEDLTQLVEDTSVDPKI 134
           ED+  AI+  +  I+          A + R  ++    +  KA++D          +  I
Sbjct: 265 EDFNMAIKFDSNYID----------AYINRGVLFKQQGEKEKALKD---------YNTAI 305

Query: 135 KVN-----AHIKRAVVHLHAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEE 189
           K+N     A+I R V+      +  KA  D ++A +++P  A  YY RG ++C  G+ ++
Sbjct: 306 KLNRNYADAYINRGVL-FKQLGETKKALQDYNQAIRLNPQYAIGYYNRGVLFCELGEKQK 364

Query: 190 ALRNLDKTIALNPNFHVARAQRHFVVHKMIVPGDRERVEQSLKEFRNFVDTHSNVVEACT 249
           AL++    I LNPN+  A   R       ++ G++  +E +LK+F   +  + N   A  
Sbjct: 365 ALQDFKNVIRLNPNYATAYQNRG------VLYGEQGEIENALKDFDMAIKLNPNYATAYQ 418

Query: 250 LFAQVLVDQEDFDGAEEYFNRSIRVDPENASLYVHRAMLMLQARGNVDEAIKLIEKAISI 309
               +  +Q   + A   F+ +I+++P  AS Y +R  L    +G  D+A++    AI +
Sbjct: 419 NRGVLFGEQGQIENALTDFDIAIKLNPTYASAYQNRGNL-FDKKGEKDKALQDYNMAIKL 477

Query: 310 DKSCMFAYETLGTIEVQRGRLEEAVKCFNKALPLARDEAELSHIYSLRDAAIAQM-KVCE 368
           + +   AY T G I  Q+G   +A++ F+KA+ L  + A   +   +      ++ K  +
Sbjct: 478 NPNYDIAYYTRGLIFKQQGEKVQALQDFDKAIQLNLNYATAYYNRGVLYGEQGEIEKALQ 537

Query: 369 RYNIKKKVSPRSQNITKNEKLAIKQLRENNDIIIRPADKGGKTVVMDKADYTQKMTSILN 428
            +N+  K++P      +N  +  KQ  E                  +KA     M   LN
Sbjct: 538 DFNMAIKLNPNYDTAYQNRGVLYKQQGE-----------------KEKAFQDYNMAIKLN 580

Query: 429 SNDYEIIPGDPTKTIEESEKYGNLENESGQKHAASDFTKAFADLDEAEKVDPNVADSYYQ 488
            N          +  + S + G L  + G+K       KA  D   A K++PN A +YY 
Sbjct: 581 PN---YATAYQNRGKQSSSRKGVLYKQQGEKE------KALQDYHTAIKLNPNFATAYYN 631

Query: 489 RGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQRHFVW 527
           RG ++   G+ E+AL++ ++ I LNPN+  A   R  ++
Sbjct: 632 RGVLFGEQGEKEKALQDYNEAIQLNPNYATAYMNRGVIY 670



 Score =  103 bits (256), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 114/463 (24%), Positives = 209/463 (45%), Gaps = 63/463 (13%)

Query: 94  NHTKALARLLRATVYIFTSQSTKAIEDLTQLVE-DTSVDPKIKVNAHIKRAVVHLHAASD 152
           N   A A   R  V+    +  KA+ED    ++ D++      ++A+I R V+      +
Sbjct: 172 NPNDATAYYNRGVVFKQKGEKEKALEDFNMAIKFDSNY-----IDAYINRGVL-FKQQGE 225

Query: 153 FTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQRH 212
             KA  D + A K++PN A +YY RG ++   G+ ++AL + +  I  + N+  A   R 
Sbjct: 226 KEKALHDYNLAIKLNPNYATAYYNRGVVFKQKGEKQKALEDFNMAIKFDSNYIDAYINRG 285

Query: 213 FVVHKMIVPGDRERV----EQSLKEFRNFVDTHSNVVEACTLFAQVLVDQEDFDGAEEYF 268
            +  +    G++E+       ++K  RN+ D +   +    LF Q+   ++    A + +
Sbjct: 286 VLFKQQ---GEKEKALKDYNTAIKLNRNYADAY---INRGVLFKQLGETKK----ALQDY 335

Query: 269 NRSIRVDPENASLYVHRAMLMLQARGNVDEAIKLIEKAISIDKSCMFAYETLGTIEVQRG 328
           N++IR++P+ A  Y +R +L  +  G   +A++  +  I ++ +   AY+  G +  ++G
Sbjct: 336 NQAIRLNPQYAIGYYNRGVLFCEL-GEKQKALQDFKNVIRLNPNYATAYQNRGVLYGEQG 394

Query: 329 RLEEAVKCFNKALPLARDEAELSHIYSLRDAAIAQMKVCER----YNIKKKVSPRSQNIT 384
            +E A+K F+ A+ L  + A     Y  R     +    E     ++I  K++P   +  
Sbjct: 395 EIENALKDFDMAIKLNPNYAT---AYQNRGVLFGEQGQIENALTDFDIAIKLNPTYASAY 451

Query: 385 KNEKLAIKQLRENNDIIIRPADKGGKTVVMDKADYTQKMTSILNSNDYEIIPGDPTKTIE 444
           +N                   DK G+    DKA     M   LN N Y+I     T+ + 
Sbjct: 452 QNRGNLF--------------DKKGEK---DKALQDYNMAIKLNPN-YDIAY--YTRGL- 490

Query: 445 ESEKYGNLENESGQKHAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALR 504
                  +  + G+K       +A  D D+A +++ N A +YY RG +Y   G+ E+AL+
Sbjct: 491 -------IFKQQGEK------VQALQDFDKAIQLNLNYATAYYNRGVLYGEQGEIEKALQ 537

Query: 505 NLDKTIALNPNFHVARAQRHFVWTSTLAELMAFSDEFMIPKIT 547
           + +  I LNPN+  A   R  ++     +  AF D  M  K+ 
Sbjct: 538 DFNMAIKLNPNYDTAYQNRGVLYKQQGEKEKAFQDYNMAIKLN 580



 Score =  101 bits (252), Expect = 8e-19,   Method: Compositional matrix adjust.
 Identities = 99/420 (23%), Positives = 179/420 (42%), Gaps = 71/420 (16%)

Query: 140 IKRAVVHLHAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIA 199
           + R V+      +  KA  D ++A  ++P  A +YY RG ++C  G+ E+AL++ +  I 
Sbjct: 10  LNRGVLFKQQGEN-EKALQDYNKAIILNPKSAIAYYNRGILFCEKGEKEKALKDYNMAIK 68

Query: 200 LNPNFHVARAQRHFV----------------------------VHKMIVPGDRERVEQSL 231
           LNPN+ +A   R  +                            +++ I+       E++L
Sbjct: 69  LNPNYDIAYYNRGVLFGEQGEKDKAIQDYNTVIKLNENNTNAYINRGILFKQLGEHEKAL 128

Query: 232 KEFRNFVDTHSNVVEACTLFAQVLVDQEDFDGAEEYFNRSIRVDPENASLYVHRAMLMLQ 291
           +++   +  + N  +A      +L DQ   D A + FN +I+++P +A+ Y +R ++  Q
Sbjct: 129 QDYNMAIKLNPNDADAFNNLGNLLDDQGQKDKALQNFNTAIKLNPNDATAYYNRGVVFKQ 188

Query: 292 ARGNVDEAIKLIEKAISIDKSCMFAYETLGTIEVQRGRLEEAVKCFNKALPLARDEAELS 351
            +G  ++A++    AI  D + + AY   G +  Q+G  E+A+  +N A+ L  + A   
Sbjct: 189 -KGEKEKALEDFNMAIKFDSNYIDAYINRGVLFKQQGEKEKALHDYNLAIKLNPNYAT-- 245

Query: 352 HIYSLRDAAIAQ----MKVCERYNIKKKVSPRSQNITKNEKLAIKQLRENNDIIIRPADK 407
             Y  R     Q     K  E +N+  K      +   N  +  KQ             +
Sbjct: 246 -AYYNRGVVFKQKGEKQKALEDFNMAIKFDSNYIDAYINRGVLFKQ-------------Q 291

Query: 408 GGKTVVMDKADYTQKMTSILNSNDYEIIPGDPTKTIEESEKYGNLENESGQKHAASDFTK 467
           G K   +   DY   +    N  D  I  G   K + E++                   K
Sbjct: 292 GEKEKAL--KDYNTAIKLNRNYADAYINRGVLFKQLGETK-------------------K 330

Query: 468 AFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQRHFVW 527
           A  D ++A +++P  A  YY RG ++C  G+ ++AL++    I LNPN+  A   R  ++
Sbjct: 331 ALQDYNQAIRLNPQYAIGYYNRGVLFCELGEKQKALQDFKNVIRLNPNYATAYQNRGVLY 390



 Score = 90.1 bits (222), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 120/511 (23%), Positives = 216/511 (42%), Gaps = 85/511 (16%)

Query: 65  LSKAKRAFEHEDYLTAIRHCTEEIESTSSNHTKALARLLRATVYIFTSQSTKAIEDLTQL 124
           L + K+A +  DY  AIR           N   A+    R  ++    +  KA++D   +
Sbjct: 325 LGETKKALQ--DYNQAIR----------LNPQYAIGYYNRGVLFCELGEKQKALQDFKNV 372

Query: 125 VEDTSVDPKIKVNAHIKRAVVHLHAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLF 184
           +    ++P     A+  R V++     +   A  D D A K++PN A +Y  RG ++   
Sbjct: 373 IR---LNPNYAT-AYQNRGVLY-GEQGEIENALKDFDMAIKLNPNYATAYQNRGVLFGEQ 427

Query: 185 GQYEEALRNLDKTIALNPNFHVARAQRHFVVHKMIVPGDRERVEQSLKEFRNFVDTHSNV 244
           GQ E AL + D  I LNP +  A   R  +  K    G++++   +L+++   +  + N 
Sbjct: 428 GQIENALTDFDIAIKLNPTYASAYQNRGNLFDK---KGEKDK---ALQDYNMAIKLNPNY 481

Query: 245 VEACTLFAQVLVDQEDFDGAEEYFNRSIRVDPENASLYVHRAMLMLQARGNVDEAIKLIE 304
             A      +   Q +   A + F+++I+++   A+ Y +R +L  + +G +++A++   
Sbjct: 482 DIAYYTRGLIFKQQGEKVQALQDFDKAIQLNLNYATAYYNRGVLYGE-QGEIEKALQDFN 540

Query: 305 KAISIDKSCMFAYETLGTIEVQRGRLEEAVKCFNKALPLA---------RDEAELSHIYS 355
            AI ++ +   AY+  G +  Q+G  E+A + +N A+ L          R +   S    
Sbjct: 541 MAIKLNPNYDTAYQNRGVLYKQQGEKEKAFQDYNMAIKLNPNYATAYQNRGKQSSSRKGV 600

Query: 356 LRDAAIAQMKVCERYNIKKKVSPRSQNITKNEKLAI-------KQLRENNDII-IRPADK 407
           L      + K  + Y+   K++P       N  +         K L++ N+ I + P   
Sbjct: 601 LYKQQGEKEKALQDYHTAIKLNPNFATAYYNRGVLFGEQGEKEKALQDYNEAIQLNP--- 657

Query: 408 GGKTVVMDKADYTQKMTSILNSNDYEIIPGDPTKTIEESEKY-------GNLENESGQKH 460
              T  M++     +   I      E    D  K I+++ KY       GNL +E G+K 
Sbjct: 658 NYATAYMNRGVIYGEQGEI------EKALQDYNKAIKQNPKYAAAYYNRGNLFDERGEKE 711

Query: 461 -AASDFT---------------------------KAFADLDEAEKVDPNVADSYYQRGQI 492
            A  D+                            KA  D ++A K++PN A +YY RG +
Sbjct: 712 DALKDYNIVIFLNPNDADAYINRGALFGEIGEKEKALQDFNQAIKLNPNYATAYYNRGVL 771

Query: 493 YCLFGQYEEALRNLDKTIALNPNFHVARAQR 523
               G+ E+AL++ +  I LN N+  A   R
Sbjct: 772 IRENGEKEKALQDYNMAIQLNRNYSTAYYNR 802



 Score = 71.6 bits (174), Expect = 9e-10,   Method: Compositional matrix adjust.
 Identities = 90/384 (23%), Positives = 168/384 (43%), Gaps = 36/384 (9%)

Query: 171 ADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQRHFVVHKMIVPGDRERVEQS 230
           AD    RG ++   G+ E+AL++ +K I LNP   +A   R       I+  ++   E++
Sbjct: 6   ADECLNRGVLFKQQGENEKALQDYNKAIILNPKSAIAYYNRG------ILFCEKGEKEKA 59

Query: 231 LKEFRNFVDTHSNVVEACTLFAQVLVDQEDFDGAEEYFNRSIRVDPENASLYVHRAMLML 290
           LK++   +  + N   A      +  +Q + D A + +N  I+++  N + Y++R +L  
Sbjct: 60  LKDYNMAIKLNPNYDIAYYNRGVLFGEQGEKDKAIQDYNTVIKLNENNTNAYINRGILFK 119

Query: 291 QARGNVDEAIKLIEKAISIDKSCMFAYETLGTIEVQRGRLEEAVKCFNKALPLARDEAEL 350
           Q  G  ++A++    AI ++ +   A+  LG +   +G+ ++A++ FN A+ L  ++A  
Sbjct: 120 QL-GEHEKALQDYNMAIKLNPNDADAFNNLGNLLDDQGQKDKALQNFNTAIKLNPNDAT- 177

Query: 351 SHIYSLRDAAIAQM----KVCERYNIKKKVSPRSQNITKNEKLAIKQLRE--------NN 398
              Y  R     Q     K  E +N+  K      +   N  +  KQ  E        N 
Sbjct: 178 --AYYNRGVVFKQKGEKEKALEDFNMAIKFDSNYIDAYINRGVLFKQQGEKEKALHDYNL 235

Query: 399 DIIIRP---ADKGGKTVVMDKADYTQKMTSILNSNDYEIIPGDPTKTIEESEKYGNLENE 455
            I + P        + VV  +    QK        D+ +     +  I+     G L  +
Sbjct: 236 AIKLNPNYATAYYNRGVVFKQKGEKQKALE-----DFNMAIKFDSNYIDAYINRGVLFKQ 290

Query: 456 SGQKHAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPN 515
            G+K       KA  D + A K++ N AD+Y  RG ++   G+ ++AL++ ++ I LNP 
Sbjct: 291 QGEKE------KALKDYNTAIKLNRNYADAYINRGVLFKQLGETKKALQDYNQAIRLNPQ 344

Query: 516 FHVARAQRHFVWTSTLAELMAFSD 539
           + +    R  ++     +  A  D
Sbjct: 345 YAIGYYNRGVLFCELGEKQKALQD 368



 Score = 65.9 bits (159), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 58/247 (23%), Positives = 119/247 (48%), Gaps = 14/247 (5%)

Query: 75  EDYLTAIRHCTEEIESTSSNHTKALARLLRATVYIFTSQSTKAIEDLTQLVEDTSVDPKI 134
           +DY  AI+       +  +   ++ +R  +  +Y    +  KA++D    ++   ++P  
Sbjct: 571 QDYNMAIKLNPNYATAYQNRGKQSSSR--KGVLYKQQGEKEKALQDYHTAIK---LNPNF 625

Query: 135 KVNAHIKRAVVHLHAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNL 194
              A+  R V+      +  KA  D +EA +++PN A +Y  RG IY   G+ E+AL++ 
Sbjct: 626 AT-AYYNRGVL-FGEQGEKEKALQDYNEAIQLNPNYATAYMNRGVIYGEQGEIEKALQDY 683

Query: 195 DKTIALNPNFHVARAQRHFVVHKMIVPGDRERVEQSLKEFRNFVDTHSNVVEACTLFAQV 254
           +K I  NP +  A   R  +        +R   E +LK++   +  + N  +A      +
Sbjct: 684 NKAIKQNPKYAAAYYNRGNLFD------ERGEKEDALKDYNIVIFLNPNDADAYINRGAL 737

Query: 255 LVDQEDFDGAEEYFNRSIRVDPENASLYVHRAMLMLQARGNVDEAIKLIEKAISIDKSCM 314
             +  + + A + FN++I+++P  A+ Y +R +L ++  G  ++A++    AI ++++  
Sbjct: 738 FGEIGEKEKALQDFNQAIKLNPNYATAYYNRGVL-IRENGEKEKALQDYNMAIQLNRNYS 796

Query: 315 FAYETLG 321
            AY   G
Sbjct: 797 TAYYNRG 803



 Score = 61.2 bits (147), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 70/283 (24%), Positives = 124/283 (43%), Gaps = 42/283 (14%)

Query: 268 FNRSIRVDPENASLYVHRAMLMLQARGNVDEAIKLIEKAISIDKSCMFAYETLGTIEVQR 327
           +N++I ++P++A  Y +R +L  + +G  ++A+K    AI ++ +   AY   G +  ++
Sbjct: 29  YNKAIILNPKSAIAYYNRGILFCE-KGEKEKALKDYNMAIKLNPNYDIAYYNRGVLFGEQ 87

Query: 328 GRLEEAVKCFNKALPLARDEAELSHIYSLRDAAIAQM----KVCERYNIKKKVSPRSQNI 383
           G  ++A++ +N  + L  +    ++ Y  R     Q+    K  + YN+  K++P   + 
Sbjct: 88  GEKDKAIQDYNTVIKLNENN---TNAYINRGILFKQLGEHEKALQDYNMAIKLNPNDADA 144

Query: 384 TKNEKLAIKQLRENNDIIIRPADKGGKTVVMDKADYTQKMTSILNSNDYEIIPGDPTKTI 443
             N    +  L +         D+G K    DKA   Q   + +  N     P D T   
Sbjct: 145 FNN----LGNLLD---------DQGQK----DKA--LQNFNTAIKLN-----PNDATAYY 180

Query: 444 EESEKYGNLENESGQKHAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEAL 503
                 G +  + G+K       KA  D + A K D N  D+Y  RG ++   G+ E+AL
Sbjct: 181 NR----GVVFKQKGEKE------KALEDFNMAIKFDSNYIDAYINRGVLFKQQGEKEKAL 230

Query: 504 RNLDKTIALNPNFHVARAQRHFVWTSTLAELMAFSDEFMIPKI 546
            + +  I LNPN+  A   R  V+     +  A  D  M  K 
Sbjct: 231 HDYNLAIKLNPNYATAYYNRGVVFKQKGEKQKALEDFNMAIKF 273


>gi|322701171|gb|EFY92922.1| mitochondrial outer membrane 72Kda protein [Metarhizium acridum
           CQMa 102]
          Length = 622

 Score =  121 bits (304), Expect = 8e-25,   Method: Compositional matrix adjust.
 Identities = 104/377 (27%), Positives = 180/377 (47%), Gaps = 34/377 (9%)

Query: 7   AQH-AKEEISKRSFFKPSKQFIKTYLKSFPNDPILQPDGLSNGVELTNGDTNESHELDLL 65
           A+H AKE ++ R    PS  F+  YL+SF      +P GL + VEL         ++ L 
Sbjct: 247 AEHRAKEMMASRPPKLPSPIFVGNYLQSFRQKG--RPAGLEDSVELDAETGKGQLQIGLQ 304

Query: 66  SKAKRAFEHEDYLTAIRHCTEEIESTSSNHTKALARLLRATVYIFTSQSTKAIEDLTQLV 125
              K+    E Y  A +   + IE       +ALA  LR T+        +A +D  + +
Sbjct: 305 GLDKKT--GEGYEQARQAFEKAIELGDLGEYEALAYNLRGTMRTLLGNHAEATKDFDKSI 362

Query: 126 EDTSVDPKIKVNAHIKRAVVHLH------AASDFTKAFADLDEAEKVDPNVADSYYQRGQ 179
           E   +DP + + ++IKRA + L       A ++F KA     E +K DP+V   YY R Q
Sbjct: 363 E---LDPGM-IQSYIKRASISLELGEPVKADAEFAKAL----EQDKDDPDV---YYHRAQ 411

Query: 180 IYCLFGQYEEALRNLDKTIALNPNFHVARAQRHFVVHKMIVPGDRERVEQSLKEFRNFVD 239
              + G   EA ++  K+I L+ +F  +  Q     +KM        +  S+  FR  + 
Sbjct: 412 ASFIKGDLAEAQKDYQKSIDLDKDFIFSHIQLGVTQYKM------GSIASSMATFRRCIK 465

Query: 240 THSNVVEACTLFAQVLVDQEDFDGAEEYFNRSIRVDPENASL------YVHRAMLMLQAR 293
               V +    + ++L+DQ +F  A E F+ ++ ++ +   +       +++A+ + Q +
Sbjct: 466 NFPKVPDVYNYYGELLLDQSNFSEAVEKFDTAMEMEKQTKPMSMNVLPLINKALALFQWK 525

Query: 294 GNVDEAIKLIEKAISIDKSCMFAYETLGTIEVQRGRLEEAVKCFNKALPLARDEAELSHI 353
            +  EA +L +KA+ ID  C  A  T+  + +Q+ ++ EA+  F +A  LAR E E+ + 
Sbjct: 526 QDFKEAEQLCQKALIIDPECDIAVATMAQLLLQQNKVTEALTYFERAAELARTEGEIVNA 585

Query: 354 YSLRDAAIAQMKVCERY 370
            S  +A   Q++V E+Y
Sbjct: 586 LSYAEATRTQVQVTEKY 602


>gi|342321232|gb|EGU13166.1| ADP/ATP carrier receptor [Rhodotorula glutinis ATCC 204091]
          Length = 837

 Score =  121 bits (303), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 100/371 (26%), Positives = 169/371 (45%), Gaps = 28/371 (7%)

Query: 8   QHAKEEISKRSFFKPSKQFIKTYLKSFPNDPILQPDGLSNGVELTNGDTNESHELDLLSK 67
           Q A++ +S R    PS  FI  YL +F   P   P  L           N S     L  
Sbjct: 238 QKAQDILSTREPRLPSPTFITAYLTAFRTRP---PPSLP---------ANPSQGDRTLQL 285

Query: 68  AKRAFEHEDYLTAIRHCTEEI-ESTSSNHTKALARLLRATVYIFTSQSTKAIEDLTQLVE 126
           A  A + +D+  A     E I +  S+   KA A  +RAT     S +  A+ DL    E
Sbjct: 286 AYDALDAKDFTHAFTFFNESIKQGISTPAGKAEALNMRATFKFIMSDAEGALVDLD---E 342

Query: 127 DTSVDPKIKVNAHIKRAVVHLHAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQ 186
            T+V P     + +K+A VH+        A  D D A ++DPN AD +Y RGQ++ + G+
Sbjct: 343 ATTVQPD-SAQSWVKKASVHMELGRP-EDAMKDFDRALEIDPNNADVFYHRGQVFFITGE 400

Query: 187 YEEALRNLDKTIALNPNFHVARAQRHFVVHKMIVPGDRERVEQSLKEFRNFVDTHSNVVE 246
           ++ A+    ++  L+P F  +  Q     +K          E++L +FR  ++ +    E
Sbjct: 401 FDRAIAEYRRSSELDPAFIFSHIQLAVAQYK------SGSTEKALHQFRRLIEKNPESAE 454

Query: 247 ACTLFAQVLVDQEDFDGAEEYFNRSIRVDP----ENASLYVHRAMLMLQARGNVDEAIKL 302
               + ++L+DQ+ F  A   F++SI +       N    V++A+ + Q R +   A  +
Sbjct: 455 VYNYYGELLLDQQKFPEAVNAFDKSIELAKNKHLRNVLPMVNKALAIFQHRQDFATAESI 514

Query: 303 IEKAISIDKSCMFAYETLGTIEVQRGRLEEAVKCFNKALPLARDEAELSHIYSLRDAAIA 362
             +A+ ID  C     TL  + +Q+ ++ +A   F K+  +AR E EL +  +  +A  A
Sbjct: 515 CREAVDIDPQCDVGVATLAQLLLQQNKVHDAADMFAKSAEMARTEPELVNALTYENATRA 574

Query: 363 QMKVCERYNIK 373
           Q+   + Y ++
Sbjct: 575 QIAFLKNYPLQ 585



 Score = 46.2 bits (108), Expect = 0.042,   Method: Compositional matrix adjust.
 Identities = 24/73 (32%), Positives = 39/73 (53%), Gaps = 3/73 (4%)

Query: 468 AFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNF---HVARAQRH 524
           A  D D A ++DPN AD +Y RGQ++ + G+++ A+    ++  L+P F   H+  A   
Sbjct: 370 AMKDFDRALEIDPNNADVFYHRGQVFFITGEFDRAIAEYRRSSELDPAFIFSHIQLAVAQ 429

Query: 525 FVWTSTLAELMAF 537
           +   ST   L  F
Sbjct: 430 YKSGSTEKALHQF 442



 Score = 44.7 bits (104), Expect = 0.14,   Method: Compositional matrix adjust.
 Identities = 18/53 (33%), Positives = 33/53 (62%)

Query: 463 SDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPN 515
           SD   A  DLDEA  V P+ A S+ ++  ++   G+ E+A+++ D+ + ++PN
Sbjct: 331 SDAEGALVDLDEATTVQPDSAQSWVKKASVHMELGRPEDAMKDFDRALEIDPN 383


>gi|453086375|gb|EMF14417.1| mitochondrial outer membrane translocase receptor [Mycosphaerella
           populorum SO2202]
          Length = 626

 Score =  120 bits (302), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 92/360 (25%), Positives = 176/360 (48%), Gaps = 29/360 (8%)

Query: 22  PSKQFIKTYLKSFPNDPILQPDGLSNGVELTNGDTNESHELDLLSKAKRAFEH---EDYL 78
           PS  F+  YL+SF   P+  P+GL    +L  G + + H    L K  +A  H   E Y 
Sbjct: 269 PSPTFVSNYLQSFRAKPL--PEGLEETADLAEG-SGKWH----LRKGLQAIRHRNSEGYK 321

Query: 79  TAIRHCTEEIESTSSNHTKALARLLRATVYIFTSQSTKAIEDLTQLVEDTSVDPKIKVNA 138
            A     + +E    ++  A A  +R T +     +  A+ DL + +E   +DP + V +
Sbjct: 322 EAAEAFDKAVELGDLDNHAAEAYNMRGTFHYLRGDNDSALNDLNKSIE---LDPTL-VQS 377

Query: 139 HIKRAVVHLHAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTI 198
           ++KRA +HL  ++   +A  D + A + +PN  D YY R Q++ +  ++  A  +  K+I
Sbjct: 378 YVKRASMHLEQSAR-EEAANDFETAAQHNPNDPDIYYHRAQLHFVLSEFSLAATDYQKSI 436

Query: 199 ALNPNFHVARAQRHFVVHKMIVPGDRERVEQSLKEFRNFVDTHSNVVEACTLFAQVLVDQ 258
            L+ +F  +  Q     +KM        +  S+  FR  +    +  +    + ++L+DQ
Sbjct: 437 DLDKDFIFSHIQLGVTQYKM------GSIASSMATFRRCIKNFGDKSDVYNYYGELLLDQ 490

Query: 259 EDFDGAEEYFNRSIRVDPE--------NASLYVHRAMLMLQARGNVDEAIKLIEKAISID 310
           + +  A E F  ++ ++ +        N    +++A+ + Q + +   A +L EKA+ ID
Sbjct: 491 QKYQEAVEKFETAVEMEKKAVGETGGMNVLPLINKALALFQWKQDFVAAEQLCEKALLID 550

Query: 311 KSCMFAYETLGTIEVQRGRLEEAVKCFNKALPLARDEAELSHIYSLRDAAIAQMKVCERY 370
             C  A  T+  + +Q+G++ +A++ F +A  L+R E E+ +  S  +A   Q++V ++Y
Sbjct: 551 PECDIAVATMAQLLLQQGKVTDALEYFERAAKLSRTEGEIVNALSYAEATRTQLEVQQKY 610



 Score = 40.4 bits (93), Expect = 2.2,   Method: Compositional matrix adjust.
 Identities = 27/75 (36%), Positives = 38/75 (50%), Gaps = 7/75 (9%)

Query: 454 NESGQKHAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALN 513
           N  G K AA  F KA     E   +D + A++Y  RG  + L G  + AL +L+K+I L+
Sbjct: 316 NSEGYKEAAEAFDKAV----ELGDLDNHAAEAYNMRGTFHYLRGDNDSALNDLNKSIELD 371

Query: 514 PNF---HVARAQRHF 525
           P     +V RA  H 
Sbjct: 372 PTLVQSYVKRASMHL 386


>gi|393214785|gb|EJD00277.1| TPR-like protein [Fomitiporia mediterranea MF3/22]
          Length = 614

 Score =  120 bits (302), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 101/367 (27%), Positives = 170/367 (46%), Gaps = 29/367 (7%)

Query: 10  AKEEISKRSFFKPSKQFIKTYLKSFPNDPILQPDGLSNGVELTNGDTNESHELDLLSKAK 69
           A++ +SKR    P   F+  Y  +F + PI  PD   N    + GD      L+ L+   
Sbjct: 244 ARDIMSKRESHLPPHTFVDAYFGAFRSRPI--PDLPENP---STGDNTLKLSLEALAA-- 296

Query: 70  RAFEHEDYLTAIRHCTEEIE-STSSNHTKALARLLRATVYIFTSQSTKAIEDLTQLVEDT 128
                 DY  A+    E IE   S +  +A A  LR +       S  A +DL   +   
Sbjct: 297 -----HDYTHALTLVNEAIEQGISFDAGRAHALNLRGSFRFLMGDSQGAKDDLEAAI--- 348

Query: 129 SVDPKIKVNAHIKRAVVHLHAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYE 188
           +  P+    + +K A VH+   S     FA  ++A K DP   D YY RGQ+  +  ++ 
Sbjct: 349 AAQPEF-TQSLVKIASVHMEQ-SKPEDTFAAFEQAIKHDPKDPDIYYHRGQVLFIMQEFT 406

Query: 189 EALRNLDKTIALNPNFHVARAQRHFVVHKMIVPGDRERVEQSLKEFRNFVDTHSNVVEAC 248
           +A  N  K+  L+P F  +  Q     +K       +++ +++  FR  +       E  
Sbjct: 407 QAAENYRKSFELDPTFVFSHIQLAVAQYKA------DQLSEAMVTFRKALKAFPQRSEPY 460

Query: 249 TLFAQVLVDQEDFDGAEEYFNRSIRVD-----PENASLYVHRAMLMLQARGNVDEAIKLI 303
             + ++L+DQ+ F+ A E F+R+I ++     P N    V++ + + Q + ++  A K+I
Sbjct: 461 NYYGELLLDQKRFEDAIEKFDRAIEIEKAKNPPINVLAMVNKGLALFQWKNDLAGAEKII 520

Query: 304 EKAISIDKSCMFAYETLGTIEVQRGRLEEAVKCFNKALPLARDEAELSHIYSLRDAAIAQ 363
           ++A+  D  C  A  TL  I +QRG +E+A+K F + + LAR EA++ +      AA AQ
Sbjct: 521 KEALEADPECEAAVATLAQISLQRGEVEQAMKYFERQVDLARTEADVMNALQFMHAAKAQ 580

Query: 364 MKVCERY 370
            +    Y
Sbjct: 581 NEFSRNY 587



 Score = 40.4 bits (93), Expect = 2.7,   Method: Compositional matrix adjust.
 Identities = 18/48 (37%), Positives = 27/48 (56%)

Query: 469 FADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNF 516
           FA  ++A K DP   D YY RGQ+  +  ++ +A  N  K+  L+P F
Sbjct: 375 FAAFEQAIKHDPKDPDIYYHRGQVLFIMQEFTQAAENYRKSFELDPTF 422


>gi|342879014|gb|EGU80291.1| hypothetical protein FOXB_09218 [Fusarium oxysporum Fo5176]
          Length = 620

 Score =  119 bits (299), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 99/370 (26%), Positives = 179/370 (48%), Gaps = 23/370 (6%)

Query: 8   QHAKEEISKRSFFKPSKQFIKTYLKSFPNDPILQPDGLSNGVELTNGDTNESH-ELDLLS 66
           Q AKE ++ R    PS  F+  YL+SF   P  +P+GL +  EL + DT +   ++ L +
Sbjct: 246 QKAKEMMASRPPKLPSPIFVGNYLQSFRPKP--RPEGLEDSEEL-DPDTGKGQVQIGLQA 302

Query: 67  KAKRAFEHEDYLTAIRHCTEEIESTSSNHTKALARLLRATVYIFTSQSTKAIEDLTQLVE 126
             K+    + Y  A +   + +E       +ALA  +R T         +A +D  + +E
Sbjct: 303 LEKKT--GDGYEEARQAFEKALELGDLGEHEALAYNMRGTFRTLLGNHAEATQDFDKSIE 360

Query: 127 DTSVDPKIKVNAHIKRAVVHLHAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQ 186
              +DP +   ++IKRA + L    +  KA A+  +A + D N  D YY R Q + + G 
Sbjct: 361 ---LDPSM-TQSYIKRASISLELG-EPDKAEAEFAKALEQDKNDPDVYYHRAQAHFIKGD 415

Query: 187 YEEALRNLDKTIALNPNFHVARAQRHFVVHKMIVPGDRERVEQSLKEFRNFVDTHSNVVE 246
             +A ++  K+I L+ +F  +  Q     +KM        +  S+  FR  +     V +
Sbjct: 416 LADAQKDYQKSIDLDKDFIFSHIQLGVTQYKM------GSIASSMATFRRCIKNFPKVPD 469

Query: 247 ACTLFAQVLVDQEDFDGAEEYFNRSIRVDPENASL------YVHRAMLMLQARGNVDEAI 300
               + ++L+DQ +F  A E F+ ++ ++ +   +       +++A+ + Q + +  EA 
Sbjct: 470 VYNYYGELLLDQGNFSEAVEKFDTAMEMEKQTKPMSMNVLPLINKALALFQWKQDFKEAE 529

Query: 301 KLIEKAISIDKSCMFAYETLGTIEVQRGRLEEAVKCFNKALPLARDEAELSHIYSLRDAA 360
            L +KA+ ID  C  A  T+  + +Q+  +  A+K F +A  LAR E E+ +  S  +A 
Sbjct: 530 ALCQKALIIDPECDIAVATMAQLLLQQNNVPAALKYFERAAELARTEGEIVNALSYAEAT 589

Query: 361 IAQMKVCERY 370
             Q++V E+Y
Sbjct: 590 RTQVQVTEKY 599


>gi|46136823|ref|XP_390103.1| hypothetical protein FG09927.1 [Gibberella zeae PH-1]
          Length = 613

 Score =  119 bits (299), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 99/370 (26%), Positives = 179/370 (48%), Gaps = 23/370 (6%)

Query: 8   QHAKEEISKRSFFKPSKQFIKTYLKSFPNDPILQPDGLSNGVELTNGDTNESH-ELDLLS 66
           Q AKE ++ R    PS  F+  YL+SF   P  +P+GL +  EL + DT +   ++ L +
Sbjct: 239 QKAKEMMASRPPKLPSPIFVGNYLQSFRPKP--RPEGLEDSEEL-DPDTGKGQVQIGLQA 295

Query: 67  KAKRAFEHEDYLTAIRHCTEEIESTSSNHTKALARLLRATVYIFTSQSTKAIEDLTQLVE 126
             K+    + Y  A +   + +E       +ALA  +R T         +A +D  + +E
Sbjct: 296 LEKKT--GDGYEEARQAFEKALELGDLGEYEALAYNMRGTFRTLLGNHAEATQDFDKSIE 353

Query: 127 DTSVDPKIKVNAHIKRAVVHLHAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQ 186
              +DP +   ++IKRA + L    +  KA A+  +A + D N  D YY R Q + + G 
Sbjct: 354 ---LDPSM-TQSYIKRASISLELG-EPEKAEAEFAKALEQDKNDPDVYYHRAQAHFIKGD 408

Query: 187 YEEALRNLDKTIALNPNFHVARAQRHFVVHKMIVPGDRERVEQSLKEFRNFVDTHSNVVE 246
             +A ++  K+I L+ +F  +  Q     +KM        +  S+  FR  +     V +
Sbjct: 409 LADAQKDYQKSIDLDKDFIFSHIQLGVTQYKM------GSIASSMATFRRCIKNFPKVPD 462

Query: 247 ACTLFAQVLVDQEDFDGAEEYFNRSIRVDPENASL------YVHRAMLMLQARGNVDEAI 300
               + ++L+DQ +F  A E F+ ++ ++ +   +       +++A+ + Q + +  EA 
Sbjct: 463 VYNYYGELLLDQGNFSEAVEKFDTAMEMEKQTKPMSMNVLPLINKALALFQWKQDFKEAE 522

Query: 301 KLIEKAISIDKSCMFAYETLGTIEVQRGRLEEAVKCFNKALPLARDEAELSHIYSLRDAA 360
            L +KA+ ID  C  A  T+  + +Q+  +  A+K F +A  LAR E E+ +  S  +A 
Sbjct: 523 ALCKKALIIDPECDIAVATMAQLLLQQNNVPAALKYFERAAELARTEGEIVNALSYAEAT 582

Query: 361 IAQMKVCERY 370
             Q++V E+Y
Sbjct: 583 RTQVQVTEKY 592


>gi|408397552|gb|EKJ76693.1| hypothetical protein FPSE_03104 [Fusarium pseudograminearum CS3096]
          Length = 620

 Score =  119 bits (299), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 99/370 (26%), Positives = 179/370 (48%), Gaps = 23/370 (6%)

Query: 8   QHAKEEISKRSFFKPSKQFIKTYLKSFPNDPILQPDGLSNGVELTNGDTNESH-ELDLLS 66
           Q AKE ++ R    PS  F+  YL+SF   P  +P+GL +  EL + DT +   ++ L +
Sbjct: 246 QKAKEMMASRPPKLPSPIFVGNYLQSFRPKP--RPEGLEDSEEL-DPDTGKGQVQIGLQA 302

Query: 67  KAKRAFEHEDYLTAIRHCTEEIESTSSNHTKALARLLRATVYIFTSQSTKAIEDLTQLVE 126
             K+    + Y  A +   + +E       +ALA  +R T         +A +D  + +E
Sbjct: 303 LEKKT--GDGYEEARQAFEKALELGDLGEYEALAYNMRGTFRTLLGNHAEATQDFDKSIE 360

Query: 127 DTSVDPKIKVNAHIKRAVVHLHAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQ 186
              +DP +   ++IKRA + L    +  KA A+  +A + D N  D YY R Q + + G 
Sbjct: 361 ---LDPSM-TQSYIKRASISLELG-EPEKAEAEFAKALEQDKNDPDVYYHRAQAHFIKGD 415

Query: 187 YEEALRNLDKTIALNPNFHVARAQRHFVVHKMIVPGDRERVEQSLKEFRNFVDTHSNVVE 246
             +A ++  K+I L+ +F  +  Q     +KM        +  S+  FR  +     V +
Sbjct: 416 LADAQKDYQKSIDLDKDFIFSHIQLGVTQYKM------GSIASSMATFRRCIKNFPKVPD 469

Query: 247 ACTLFAQVLVDQEDFDGAEEYFNRSIRVDPENASL------YVHRAMLMLQARGNVDEAI 300
               + ++L+DQ +F  A E F+ ++ ++ +   +       +++A+ + Q + +  EA 
Sbjct: 470 VYNYYGELLLDQGNFSEAVEKFDTAMEMEKQTKPMSMNVLPLINKALALFQWKQDFKEAE 529

Query: 301 KLIEKAISIDKSCMFAYETLGTIEVQRGRLEEAVKCFNKALPLARDEAELSHIYSLRDAA 360
            L +KA+ ID  C  A  T+  + +Q+  +  A+K F +A  LAR E E+ +  S  +A 
Sbjct: 530 ALCKKALIIDPECDIAVATMAQLLLQQNNVPAALKYFERAAELARTEGEIVNALSYAEAT 589

Query: 361 IAQMKVCERY 370
             Q++V E+Y
Sbjct: 590 RTQVQVTEKY 599


>gi|358058963|dbj|GAA95361.1| hypothetical protein E5Q_02018 [Mixia osmundae IAM 14324]
          Length = 647

 Score =  119 bits (298), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 99/356 (27%), Positives = 173/356 (48%), Gaps = 30/356 (8%)

Query: 22  PSKQFIKTYLKSFPNDPILQPDGLSNGVELTNGDTNESHELDLLSKAKRAFEHEDYLTAI 81
           PS  FI+ Y+++F   P  +PD      E   G       +  LS A  A + +DY  A 
Sbjct: 302 PSPTFIRAYMEAF--RPRARPD---MPAEAEQG-------VQTLSLACDALDAKDYTHAY 349

Query: 82  RHCTEEI-ESTSSNHTKALARLLRATVYIFTSQSTKAIEDLTQLVEDTSVDPKIKVNAHI 140
           +   E + +  SS   +A A  +R T+     ++ +A+ DL +    T + P +     +
Sbjct: 350 QLFDESLGQGISSPELEAYALNMRGTMRFIMGKAKEALPDLDR---STDLAPSV-AQTWV 405

Query: 141 KRAVVHLHAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIAL 200
           K+A VH+        AFAD D+A  V+P+  D YY RGQ++ + G Y +A+    K++ L
Sbjct: 406 KKASVHMELGQT-QDAFADFDQAVSVNPDDPDIYYHRGQVHFIMGDYTKAIEEYKKSVTL 464

Query: 201 NPNFHVARAQRHFVVHKMIVPGDRERVEQSL-KEFRNFVDTHSNVVEACTLFAQVLVDQE 259
           +  F  +  Q     +K    G + R  ++  K  R F  T   +      + +VL+D +
Sbjct: 465 DRAFIYSHIQLAVAYYKA---GSQARALKAFEKGLREFGTTSGEI---HNYYGEVLLDLK 518

Query: 260 DFDGAEEYFNRSIRVD-----PENASLYVHRAMLMLQARGNVDEAIKLIEKAISIDKSCM 314
            F+ A   F +++ ++     P N    V++A+ +     +  +A +L ++AI+ID++C 
Sbjct: 519 KFEEAYAAFAKAVEMNLAGPKPVNVLPLVNQALCVFTWNQDFAQAEQLCQRAITIDENCD 578

Query: 315 FAYETLGTIEVQRGRLEEAVKCFNKALPLARDEAELSHIYSLRDAAIAQMKVCERY 370
            A  T   +++Q+ ++  A K FN+A+ LAR E EL +  S   AA AQ+   + Y
Sbjct: 579 VAVATCAQLKLQQNQIPAAAKLFNRAVELARTEVELVNAISYVAAAEAQLDFVKHY 634



 Score = 48.5 bits (114), Expect = 0.010,   Method: Compositional matrix adjust.
 Identities = 26/73 (35%), Positives = 40/73 (54%), Gaps = 3/73 (4%)

Query: 468 AFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNF---HVARAQRH 524
           AFAD D+A  V+P+  D YY RGQ++ + G Y +A+    K++ L+  F   H+  A  +
Sbjct: 420 AFADFDQAVSVNPDDPDIYYHRGQVHFIMGDYTKAIEEYKKSVTLDRAFIYSHIQLAVAY 479

Query: 525 FVWTSTLAELMAF 537
           +   S    L AF
Sbjct: 480 YKAGSQARALKAF 492



 Score = 41.6 bits (96), Expect = 1.0,   Method: Compositional matrix adjust.
 Identities = 17/63 (26%), Positives = 37/63 (58%), Gaps = 3/63 (4%)

Query: 467 KAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALN---PNFHVARAQR 523
           +A  DLD +  + P+VA ++ ++  ++   GQ ++A  + D+ +++N   P+ +  R Q 
Sbjct: 385 EALPDLDRSTDLAPSVAQTWVKKASVHMELGQTQDAFADFDQAVSVNPDDPDIYYHRGQV 444

Query: 524 HFV 526
           HF+
Sbjct: 445 HFI 447


>gi|452844414|gb|EME46348.1| hypothetical protein DOTSEDRAFT_70370 [Dothistroma septosporum
           NZE10]
          Length = 626

 Score =  119 bits (297), Expect = 6e-24,   Method: Compositional matrix adjust.
 Identities = 95/360 (26%), Positives = 173/360 (48%), Gaps = 28/360 (7%)

Query: 22  PSKQFIKTYLKSFPNDPILQPDGLSNGVELTNGDTNESHELDLLSKAKRAFEHEDYLTAI 81
           PS  F+  YL+SF    +  P+GL    +L  G         LL+  +R    E Y  A 
Sbjct: 264 PSPTFVSNYLQSFRAKDL--PEGLEETADLEEGSGRWHLRKGLLAIRRRT--GEGYNEAA 319

Query: 82  RHCTEEIESTSSNHTKALARLLRATVYIFTSQSTKAIEDLTQLVE-DTSVDPKIKVNAHI 140
               +  E  + +  +A A  +R T      ++  A+EDL + +E D S+     V +++
Sbjct: 320 ESFDKATEQGNLDKHEANAYNMRGTFRYLRGENDAALEDLNKSIELDESL-----VQSYV 374

Query: 141 KRAVVHL-HAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIA 199
           KRA +HL  +A D   A  D + A+K +P+  D YY R Q++ +  ++  A  +  K+I 
Sbjct: 375 KRASMHLEQSARD--AAANDFELAQKYNPDDPDIYYHRAQLHFILSEFSLAATDYQKSID 432

Query: 200 LNPNFHVARAQRHFVVHKMIVPGDRERVEQSLKEFRNFVDTHSNVVEACTLFAQVLVDQE 259
           L+ +F  +  Q     +KM        V  S+  FR  +    +  +    + ++L+DQ+
Sbjct: 433 LDKDFIFSHIQLGVTQYKM------GSVASSMATFRRCIKNFGDKSDVYNYYGELLLDQQ 486

Query: 260 DFDGAEEYFNRSIRVDPE---------NASLYVHRAMLMLQARGNVDEAIKLIEKAISID 310
            +  A E F  ++ ++ +         N    +++A+ + Q + +   A +L +KA+ ID
Sbjct: 487 KYQEAVEKFETAVEMEKKAVGERGGGMNVLPLINKALALFQWKQDFSAAEELCDKALIID 546

Query: 311 KSCMFAYETLGTIEVQRGRLEEAVKCFNKALPLARDEAELSHIYSLRDAAIAQMKVCERY 370
             C  A  T+  + +Q+G++ EA+K F +A  L+R E E+ +  S  +A   Q++V E+Y
Sbjct: 547 PECDIAVATMAQLLLQQGKVTEALKYFERAAELSRTEGEIVNALSYAEATRTQLEVQEKY 606


>gi|213410593|ref|XP_002176066.1| mitochondrial TOM complex subunit Tom70 [Schizosaccharomyces
           japonicus yFS275]
 gi|212004113|gb|EEB09773.1| mitochondrial TOM complex subunit Tom70 [Schizosaccharomyces
           japonicus yFS275]
          Length = 638

 Score =  118 bits (296), Expect = 8e-24,   Method: Compositional matrix adjust.
 Identities = 95/356 (26%), Positives = 172/356 (48%), Gaps = 30/356 (8%)

Query: 22  PSKQFIKTYLKSFPNDPILQPDGLSNGVELTNGDTNESHELDLLSKAKRAFEHEDYLTAI 81
           PS  FI+TYL SF   P L+     NG E   GD   +  ++ L + K A   E      
Sbjct: 295 PSATFIRTYLDSFRAQPALE---YENGNE---GDAALAASIEALEQGKFAESQE---LVN 345

Query: 82  RHCTEEIESTSSNHTKALARLLRATVYIFTSQSTKAIEDLTQLVEDTSVDPKIKVNAHIK 141
           + C       SS+   A A  L  T    +  S ++I D  + +E   +DP   +  +++
Sbjct: 346 KACAT---GCSSDKLSARAYNLVGTYKFVSGDSKESIADFEKAIE---LDPTF-IQPYVR 398

Query: 142 RAVVHLHAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALN 201
               +L   ++  K +   ++AE V     D YY R Q++ + G + +A+++  K+  L+
Sbjct: 399 LGAAYLDE-NERDKMWKTFEKAESVSTTDPDLYYHRAQVHFISGDFAKAIKDYRKSNELD 457

Query: 202 PNFHVARAQRHFVVHKMIVPGDRERVEQSLKEFRNFVDTHSNVVEACTLFAQVLVDQEDF 261
             F     Q     +K         VE+++K F    +   +  E    + ++L+DQ+ F
Sbjct: 458 DTFIYGYIQLAVAQYK------SNEVEEAVKTFEMCKERFPDSGEVYNYYGEILLDQQKF 511

Query: 262 DGAEEYFNRSIRVDPE-------NASLYVHRAMLMLQARGNVDEAIKLIEKAISIDKSCM 314
           D A ++F+R+I +  +       NA   +++A+ + QA+ +VD+A KL ++A+  D  C 
Sbjct: 512 DEALDHFDRAIELGKKKSAQNVMNAMPLINKALTVFQAKRDVDQAEKLCQQALDADPECD 571

Query: 315 FAYETLGTIEVQRGRLEEAVKCFNKALPLARDEAELSHIYSLRDAAIAQMKVCERY 370
            A  ++    +Q+G+  EA+K F K+  LAR E+E+ + +S  +A   Q+ + +RY
Sbjct: 572 IAVASMAQFLLQQGKPVEALKYFEKSADLARTESEMVNAFSYSEATRTQIALTDRY 627


>gi|296811925|ref|XP_002846300.1| s import receptor [Arthroderma otae CBS 113480]
 gi|238841556|gb|EEQ31218.1| s import receptor [Arthroderma otae CBS 113480]
          Length = 623

 Score =  118 bits (295), Expect = 8e-24,   Method: Compositional matrix adjust.
 Identities = 102/355 (28%), Positives = 172/355 (48%), Gaps = 29/355 (8%)

Query: 22  PSKQFIKTYLKSFPNDPILQPDGLSNGVELTNGDTNESHELDLLSKAKRAFEHEDYLTAI 81
           PS  F+  YL+SF   PI  P+ L   VEL            LL+ AK     + Y  + 
Sbjct: 270 PSATFVSNYLQSFRPKPI--PEELDESVELKEDSGLGQLRKGLLAVAKST--GDGYDESA 325

Query: 82  RHCTEEIESTSSNHTKALARLLRATVYIFTSQSTKAIEDLTQLVEDTSVDPKIKVNAHIK 141
           R   + +E       +ALA  +RAT   FT  + +A   L  L +   +DP + V ++IK
Sbjct: 326 RSFEKALELGDLGKFEALALNMRAT---FTYLAGEAAAALADLNKSIELDPSL-VQSYIK 381

Query: 142 RAVVHLHAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALN 201
           R   +  +A D      D D A   + +  D YY R Q++ + G+  EA ++  K+I L+
Sbjct: 382 R---NRESAQD------DFDLAVTQNKDDPDIYYHRAQLHFILGELGEAAKDYQKSIDLD 432

Query: 202 PNFHVARAQRHFVVHKMIVPGDRERVEQSLKEFRNFVDTHSNVVEACTLFAQVLVDQEDF 261
            +F  +  Q     +K+        V  ++  F+  +    NV E    + ++L+D + F
Sbjct: 433 RDFIYSHIQLGVTQYKL------GSVASAMATFKRTLKNFENVAEVYNYYGELLLDMQKF 486

Query: 262 DGAEEYFNRSIRVDPENASL------YVHRAMLMLQARGNVDEAIKLIEKAISIDKSCMF 315
             A E F+R++ ++  N          +++A+ + Q + +  EA  L +KA+ ID  C  
Sbjct: 487 SEAIEKFDRAVELEKSNKPWSINVLPLINKALAIFQWKQDFQEAENLCQKALIIDPDCDI 546

Query: 316 AYETLGTIEVQRGRLEEAVKCFNKALPLARDEAELSHIYSLRDAAIAQMKVCERY 370
           A  TL  + +Q+G++ +A+K F +A  LAR EAE+ +  S  +A  AQ++V E+Y
Sbjct: 547 AIATLAQLLLQQGKVSQALKYFERAAELARTEAEVINAVSYAEATRAQLEVQEKY 601


>gi|449296447|gb|EMC92467.1| hypothetical protein BAUCODRAFT_77733 [Baudoinia compniacensis UAMH
           10762]
          Length = 637

 Score =  118 bits (295), Expect = 9e-24,   Method: Compositional matrix adjust.
 Identities = 92/363 (25%), Positives = 171/363 (47%), Gaps = 35/363 (9%)

Query: 22  PSKQFIKTYLKSFPNDPILQPDGLSNGVELTNGDTNESHELDLLSKAKRAFEHEDYLTAI 81
           PS  F+  YL+SF   P+  P+GL    +L+           LL+  +R    E Y  A 
Sbjct: 276 PSPTFVSNYLQSFRARPL--PEGLEESADLSEDSGKWFLRKGLLAIQQRT--AEGYAEAA 331

Query: 82  RHCTEEIESTSSNHTKALARLLRATVYIFTSQSTKAIEDLTQLVEDTSVDPKIKVNAHIK 141
           +     +E       +A A  +R T      ++  A+EDL + +E   +DP + V +++K
Sbjct: 332 QCFDSAVEKNELESHEAYAYNMRGTFRYLKGENDAALEDLNKSIE---LDPAL-VQSYVK 387

Query: 142 RAVVHLH------AASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLD 195
           RA +HL       AA+DF +A          DP++   +Y R Q++ +  ++  A  +  
Sbjct: 388 RASMHLEQSKRDEAANDFEQAMTH----NASDPDI---FYHRAQLHFILSEFSAAASDYQ 440

Query: 196 KTIALNPNFHVARAQRHFVVHKMIVPGDRERVEQSLKEFRNFVDTHSNVVEACTLFAQVL 255
           K+I L+  F  +  Q     +KM        +  S+  FR  +    +  +    + ++L
Sbjct: 441 KSIDLDSKFIFSHIQLGVTQYKM------GSIASSMATFRRCIKNFGDKSDVYNYYGELL 494

Query: 256 VDQEDFDGAEEYFNRSIRVDPE--------NASLYVHRAMLMLQARGNVDEAIKLIEKAI 307
           +DQ+ +  A E F  ++ ++ +        N    +++A+ + Q + +   A +L +KA+
Sbjct: 495 LDQQKYQEAVEKFETAVEMERKSVGEKGGMNVLPLINKALALFQWKQDYSAAEELCQKAL 554

Query: 308 SIDKSCMFAYETLGTIEVQRGRLEEAVKCFNKALPLARDEAELSHIYSLRDAAIAQMKVC 367
            ID  C  A  T+  + +Q+G++ EA+K F +A  L+R E E+ +  S  +A   Q++V 
Sbjct: 555 IIDPECDIAVATMAQLLLQQGKVTEALKYFERAAELSRTEGEVVNALSYAEATRTQLEVQ 614

Query: 368 ERY 370
           E+Y
Sbjct: 615 EKY 617


>gi|336369260|gb|EGN97602.1| hypothetical protein SERLA73DRAFT_92775 [Serpula lacrymans var.
           lacrymans S7.3]
 gi|336382043|gb|EGO23194.1| hypothetical protein SERLADRAFT_472030 [Serpula lacrymans var.
           lacrymans S7.9]
          Length = 596

 Score =  118 bits (295), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 106/368 (28%), Positives = 167/368 (45%), Gaps = 31/368 (8%)

Query: 10  AKEEISKRSFFKPSKQFIKTYLKSFPNDPILQPDGLSNGVE-LTNGDTNESHELDLLSKA 68
           A E IS R    PS  FI  Y  +F      +P  L    E  T GD       + L  A
Sbjct: 237 ANEIISSREPRLPSFTFISAYFAAF------RPRSLPTLPENPTTGD-------NTLILA 283

Query: 69  KRAFEHEDYLTAIRHCTEEI-ESTSSNHTKALARLLRATVYIFTSQSTKAIEDLTQLVED 127
            +A E  DY  ++    E + +  S    +A A  LR T          A  DL Q +  
Sbjct: 284 LQALEAGDYSHSVVLVNEAVDQGISWGAGEAEALNLRGTFKFLMGDVLGAKADLLQSI-- 341

Query: 128 TSVDPKIKVNAHIKRAVVHLHAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQY 187
            S+ P     + +K A VH+    D  KAF   +EA + DPN AD YY RGQ+  +  ++
Sbjct: 342 -SLLPSF-TQSLVKVASVHMEQG-DREKAFECFEEAIRQDPNDADVYYHRGQVLFITNEF 398

Query: 188 EEALRNLDKTIALNPNFHVARAQRHFVVHKMIVPGDRERVEQSLKEFRNFVDTHSNVVEA 247
           E+A  N  +++ L+  F  +  Q     +KM   G+   V  S+  FR  +       E 
Sbjct: 399 EKAAENYQQSMNLDDTFVFSHIQLAVAQYKM---GN---VANSMATFRRTLTAFPQRSEP 452

Query: 248 CTLFAQVLVDQEDFDGAEEYFNRSIRVD-----PENASLYVHRAMLMLQARGNVDEAIKL 302
              + ++L+DQ+ F  A E F R+I ++     P N    V++ + + Q + ++  A + 
Sbjct: 453 PNYYGELLLDQQRFQDAVEKFERAIEIERAKAPPMNVLSLVNKGLALYQWKQDIGAAERC 512

Query: 303 IEKAISIDKSCMFAYETLGTIEVQRGRLEEAVKCFNKALPLARDEAELSHIYSLRDAAIA 362
             +A+ ID  C  A  T+  + +Q+  +E A++ F++   LAR E EL +  + R A+ A
Sbjct: 513 CNEALRIDPECEAAVATIAQLSLQQSNIERAIEMFDRQAELARSEPELINALTYRYASAA 572

Query: 363 QMKVCERY 370
           QM   + Y
Sbjct: 573 QMDFMKNY 580



 Score = 43.5 bits (101), Expect = 0.30,   Method: Compositional matrix adjust.
 Identities = 21/54 (38%), Positives = 32/54 (59%)

Query: 463 SDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNF 516
            D  KAF   +EA + DPN AD YY RGQ+  +  ++E+A  N  +++ L+  F
Sbjct: 362 GDREKAFECFEEAIRQDPNDADVYYHRGQVLFITNEFEKAAENYQQSMNLDDTF 415


>gi|451856934|gb|EMD70225.1| hypothetical protein COCSADRAFT_132904 [Cochliobolus sativus
           ND90Pr]
          Length = 626

 Score =  117 bits (294), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 93/355 (26%), Positives = 168/355 (47%), Gaps = 21/355 (5%)

Query: 22  PSKQFIKTYLKSFPNDPILQPDGLSNGVELTNGDTNESHELDLLSKAKRAFEHEDYLTAI 81
           PS  F+  YL+SF   P   P+GL +  EL   + +   +L    KA      + Y  A 
Sbjct: 267 PSPTFVTNYLQSFRPKPT--PEGLEDDAELD--EESGKSQLRKGLKAMATKTGDGYTEAA 322

Query: 82  RHCTEEIESTSSNHTKALARLLRATVYIFTSQSTKAIEDLTQLVEDTSVDPKIKVNAHIK 141
                 +E       +A A  +R T       +  A++D+ + +E   + P +   + IK
Sbjct: 323 AAFDRALELGDLGEHEAFAYNMRGTFSYLKGDNEDALKDMDKSIE---LQPTL-TQSFIK 378

Query: 142 RAVVHLHAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALN 201
           RA +HL  A+            E+ + N  D +Y R Q++ +  ++ EA ++  K+I L+
Sbjct: 379 RASMHLELANPEAAEADFAAALEQ-NANDPDIFYHRAQLHFIKSEFGEAAKDYQKSIDLD 437

Query: 202 PNFHVARAQRHFVVHKMIVPGDRERVEQSLKEFRNFVDTHSNVVEACTLFAQVLVDQEDF 261
            +F  +  Q     +KM        +  S+  FR  +   S V +    + ++L+DQ+ +
Sbjct: 438 KDFIFSHIQLGVTQYKM------GSIASSMATFRRCMKNFSQVPDVYNYYGELLLDQQKY 491

Query: 262 DGAEEYFNRSIRVDPENASL------YVHRAMLMLQARGNVDEAIKLIEKAISIDKSCMF 315
             A E F+ ++ ++     L       +++A+ + Q + + DEA KL EKA+ ID  C  
Sbjct: 492 QEAIEKFDTAVEMEKTTKPLGMNVLPLINKALALFQWKNDFDEAEKLCEKALIIDPECDI 551

Query: 316 AYETLGTIEVQRGRLEEAVKCFNKALPLARDEAELSHIYSLRDAAIAQMKVCERY 370
           A  T+  + +Q+G++ EA+K F +A  L+R E E+ +  S  +A   Q++V E+Y
Sbjct: 552 AVATMAQLLLQQGKVTEALKYFERAAELSRTEGEIVNALSYAEATRTQLEVQEKY 606


>gi|451994049|gb|EMD86521.1| hypothetical protein COCHEDRAFT_1207460 [Cochliobolus
           heterostrophus C5]
          Length = 626

 Score =  117 bits (294), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 93/355 (26%), Positives = 168/355 (47%), Gaps = 21/355 (5%)

Query: 22  PSKQFIKTYLKSFPNDPILQPDGLSNGVELTNGDTNESHELDLLSKAKRAFEHEDYLTAI 81
           PS  F+  YL+SF   P   P+GL +  EL   + +   +L    KA      + Y  A 
Sbjct: 267 PSPTFVTNYLQSFRPKPT--PEGLEDDAELD--EESGKGQLRKGLKAMATKTGDGYTEAA 322

Query: 82  RHCTEEIESTSSNHTKALARLLRATVYIFTSQSTKAIEDLTQLVEDTSVDPKIKVNAHIK 141
                 +E       +A A  +R T       +  A++D+ + +E   + P +   + IK
Sbjct: 323 AAFDRALELGDLGEHEAFAYNMRGTFSYLKGDNEDALKDMDKSIE---LQPTL-TQSFIK 378

Query: 142 RAVVHLHAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALN 201
           RA +HL  A+            E+ + N  D +Y R Q++ +  ++ EA ++  K+I L+
Sbjct: 379 RASMHLELANPEAAEADFAAALEQ-NANDPDIFYHRAQLHFIKSEFGEAAKDYQKSIDLD 437

Query: 202 PNFHVARAQRHFVVHKMIVPGDRERVEQSLKEFRNFVDTHSNVVEACTLFAQVLVDQEDF 261
            +F  +  Q     +KM        +  S+  FR  +   S V +    + ++L+DQ+ +
Sbjct: 438 KDFIFSHIQLGVTQYKM------GSIASSMATFRRCMKNFSQVPDVYNYYGELLLDQQKY 491

Query: 262 DGAEEYFNRSIRVDPENASL------YVHRAMLMLQARGNVDEAIKLIEKAISIDKSCMF 315
             A E F+ ++ ++     L       +++A+ + Q + + DEA KL EKA+ ID  C  
Sbjct: 492 QEAIEKFDTAVEMEKTTKPLGMNVLPLINKALALFQWKNDFDEAEKLCEKALIIDPECDI 551

Query: 316 AYETLGTIEVQRGRLEEAVKCFNKALPLARDEAELSHIYSLRDAAIAQMKVCERY 370
           A  T+  + +Q+G++ EA+K F +A  L+R E E+ +  S  +A   Q++V E+Y
Sbjct: 552 AVATMAQLLLQQGKVTEALKYFERAAELSRTEGEIVNALSYAEATRTQLEVQEKY 606


>gi|255944631|ref|XP_002563083.1| Pc20g05490 [Penicillium chrysogenum Wisconsin 54-1255]
 gi|211587818|emb|CAP85878.1| Pc20g05490 [Penicillium chrysogenum Wisconsin 54-1255]
          Length = 622

 Score =  117 bits (294), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 101/362 (27%), Positives = 178/362 (49%), Gaps = 35/362 (9%)

Query: 22  PSKQFIKTYLKSFPNDPILQPDGLSNGVELTNGDTNESHELDLLSKAKRAFE-HEDYLTA 80
           PS  F+  YL+SF   P   P+GL   VEL+           L++  K+  + +E+  TA
Sbjct: 263 PSATFVSNYLQSF--RPQALPEGLEESVELSEESGKGQLRKGLIAMGKKTADGYEEAATA 320

Query: 81  IRHCTEEIESTSSNHTKALARLLRATVYIFTSQSTKAIEDLTQLVEDTSVDPKIKVNAHI 140
                  +E       + LA  +RAT       +T A+ DL + VE   + P + V ++I
Sbjct: 321 FGKA---LELGELGEFEGLALNMRATFTYLGGNATGALVDLDKSVE---LSPSL-VQSYI 373

Query: 141 KRAVVHLH------AASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNL 194
           KRA +HL       AA DF  A        K DP++   YY R Q++ +  +  EA ++ 
Sbjct: 374 KRASLHLELGNKDAAADDFELAITH----NKDDPDI---YYHRAQLHFILTELAEAAKDY 426

Query: 195 DKTIALNPNFHVARAQRHFVVHKMIVPGDRERVEQSLKEFRNFVDTHSNVVEACTLFAQV 254
            K+I L+ +F  +  Q     +KM        V  ++  FR  V     V +    + ++
Sbjct: 427 QKSIDLDRSFIYSHIQLGVTQYKM------GSVASAMATFRRTVKNFEEVPDVYNYYGEL 480

Query: 255 LVDQEDFDGAEEYFNRSIRVDPENASL------YVHRAMLMLQARGNVDEAIKLIEKAIS 308
           L+DQ+++  A E F++++ ++ ++  +       +++A+ + Q + +  EA  L +KA+ 
Sbjct: 481 LLDQQNYSEAIEKFDKAVEMEKQSKPMGINVLPLINKALALFQWKHDFQEAENLCQKALI 540

Query: 309 IDKSCMFAYETLGTIEVQRGRLEEAVKCFNKALPLARDEAELSHIYSLRDAAIAQMKVCE 368
           ID  C  A  T+  + +Q+G++ +A+K F +A  LAR EAE+ +  S  +A   Q++V E
Sbjct: 541 IDPECDIAVGTMAQLLLQQGKVSQALKYFERAAELARTEAEIINAISYAEATRTQLEVQE 600

Query: 369 RY 370
           +Y
Sbjct: 601 KY 602



 Score = 38.9 bits (89), Expect = 7.4,   Method: Compositional matrix adjust.
 Identities = 23/77 (29%), Positives = 40/77 (51%), Gaps = 4/77 (5%)

Query: 460 HAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALN---PNF 516
           +   + T A  DLD++ ++ P++  SY +R  ++   G  + A  + +  I  N   P+ 
Sbjct: 346 YLGGNATGALVDLDKSVELSPSLVQSYIKRASLHLELGNKDAAADDFELAITHNKDDPDI 405

Query: 517 HVARAQRHFVWTSTLAE 533
           +  RAQ HF+ T  LAE
Sbjct: 406 YYHRAQLHFILTE-LAE 421


>gi|320591726|gb|EFX04165.1| mitochondrial outer membrane translocase receptor [Grosmannia
           clavigera kw1407]
          Length = 618

 Score =  117 bits (293), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 102/373 (27%), Positives = 173/373 (46%), Gaps = 33/373 (8%)

Query: 10  AKEEISKRSFFKPSKQFIKTYLKSFPNDPILQPDGLSNGVELTNGDTNESHELDLLSKAK 69
           AKE +  R    PS  F+  YL+SF   P  +P+GL +  +L          L L S  K
Sbjct: 251 AKELMETRPAKLPSPTFVGNYLQSFRAKP--RPEGLDDAADLDESTGKGQLRLGLQSLEK 308

Query: 70  RAFEHEDYLTAIRHCTEEIESTSSNHTKALARLLRATVYIFTSQSTKAIEDLTQLVEDTS 129
           +    + Y  A     + +E       +ALA  LR T      +   A+  LT  +E   
Sbjct: 309 KT--ADGYEEASAAFEKALELGDLGEYEALAYNLRGTFLCLLGKHEAALAALTTSIE--- 363

Query: 130 VDPKIKVNAHIKRAVVHLH------AASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCL 183
           +D  +   ++IKRA ++L       A  DF KA    D     DP++   YY R Q++ +
Sbjct: 364 LDETM-TQSYIKRASMNLELGAPAKAEEDFAKALTQNDS----DPDI---YYHRAQLHFI 415

Query: 184 FGQYEEALRNLDKTIALNPNFHVARAQRHFVVHKMIVPGDRERVEQSLKEFRNFVDTHSN 243
             ++ EA ++  K+I L+ +F  +  Q     +K+        +  S+  FR      + 
Sbjct: 416 KAEFGEAAKDYQKSIDLDRDFIFSHIQLGVTQYKL------GSIASSMATFRRCEKNFAK 469

Query: 244 VVEACTLFAQVLVDQEDFDGAEEYFNRSIRVDPENASL------YVHRAMLMLQARGNVD 297
           V +      ++L+DQ  +  A E F+++I ++ E   +       +++++ + Q + +  
Sbjct: 470 VPDVYNYHGELLLDQTRYQDAIEKFDKAIEMEKETKPMNMNVLPLINKSLALFQWKQDFS 529

Query: 298 EAIKLIEKAISIDKSCMFAYETLGTIEVQRGRLEEAVKCFNKALPLARDEAELSHIYSLR 357
           EA KL  KA+ ID  C  A  T+  + +Q+G++ EA+K F +A  LAR E EL +  S  
Sbjct: 530 EAEKLCSKALIIDPECDIAVATMAQLLLQQGKVTEALKYFERASDLARTEGELVNALSYA 589

Query: 358 DAAIAQMKVCERY 370
           +A   Q+ V E+Y
Sbjct: 590 EATRTQIHVQEKY 602


>gi|409076810|gb|EKM77179.1| hypothetical protein AGABI1DRAFT_108307 [Agaricus bisporus var.
           burnettii JB137-S8]
          Length = 597

 Score =  117 bits (293), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 100/372 (26%), Positives = 169/372 (45%), Gaps = 33/372 (8%)

Query: 8   QHAKEEISKRSFFKPSKQFIKTYLKSFPNDPILQ-PDGLSNGVELTNGDTNESHELDLLS 66
           + A E I  R    PS  FI  Y  +F   P+   P+  S G +              L 
Sbjct: 235 EKAAEIIKSRESRLPSYTFISAYFAAFRERPLPTLPENPSQGDQT-------------LI 281

Query: 67  KAKRAFEHEDYLTAIRHCTEE-IESTSSNHTKALARLLRATVYIFTSQSTKAIEDLTQLV 125
            A  A +  DY  A+    E  +++ S+   +A A  LR T          A  DL    
Sbjct: 282 LALEALQAADYAHALSFVNEAFVQNLSTTQGEAEALNLRGTFKFLMGDVDGAKADLE--- 338

Query: 126 EDTSVDPKIKVNAHIKRAVVHLHAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFG 185
           E   + P     + +K A VH+    D  KAF   ++A K +PN AD YY RGQ+  +  
Sbjct: 339 ESIKLAPGF-TQSLVKIASVHMEQG-DPQKAFQCFEDAIKSNPNDADIYYHRGQVLFIMN 396

Query: 186 QYEEALRNLDKTIALNPNFHVARAQRHFVVHKMIVPGDRERVEQSLKEFRNFVDTHSNVV 245
           +Y++A  N  K+  L+  F  +  Q     +K        ++  S+  FR  + +  N  
Sbjct: 397 EYDDAAENYTKSSELDDTFVFSHIQLAVAQYKA------GKIANSMATFRRTIKSFPNRS 450

Query: 246 EACTLFAQVLVDQEDFDGAEEYFNRSIRVD-------PENASLYVHRAMLMLQARGNVDE 298
           E    + ++L+DQ  F+ A E F+++I ++       P N    V++ +   Q + ++  
Sbjct: 451 EPHNYYGELLLDQGRFEDAIEKFDKAIELEKSKAPPHPPNVLSLVNKGLATYQWKQDISA 510

Query: 299 AIKLIEKAISIDKSCMFAYETLGTIEVQRGRLEEAVKCFNKALPLARDEAELSHIYSLRD 358
           A K  ++A+ ID  C  A  TL  + +Q+ R+E+AV+ F + + LAR E EL +  + + 
Sbjct: 511 AEKCCDEALKIDPECEAAVATLAQLNLQQSRIEKAVEMFERQVDLARSEPELVNALTYQY 570

Query: 359 AAIAQMKVCERY 370
           A+ +Q++  ++Y
Sbjct: 571 ASKSQLEFLQKY 582



 Score = 42.4 bits (98), Expect = 0.68,   Method: Compositional matrix adjust.
 Identities = 21/54 (38%), Positives = 31/54 (57%)

Query: 463 SDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNF 516
            D  KAF   ++A K +PN AD YY RGQ+  +  +Y++A  N  K+  L+  F
Sbjct: 362 GDPQKAFQCFEDAIKSNPNDADIYYHRGQVLFIMNEYDDAAENYTKSSELDDTF 415


>gi|189192661|ref|XP_001932669.1| mitochondrial precursor proteins import receptor [Pyrenophora
           tritici-repentis Pt-1C-BFP]
 gi|187978233|gb|EDU44859.1| mitochondrial precursor proteins import receptor [Pyrenophora
           tritici-repentis Pt-1C-BFP]
          Length = 628

 Score =  117 bits (293), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 94/360 (26%), Positives = 170/360 (47%), Gaps = 31/360 (8%)

Query: 22  PSKQFIKTYLKSFPNDPILQPDGLSNGVELTNGDTNESHELDLLSKAKRAFEHE---DYL 78
           PS  F+  YL+SF   P   P+GL +  EL     +E      L K  +A   +    Y 
Sbjct: 267 PSPTFVTNYLQSFRPKPT--PEGLEDDAEL-----DEESGKGQLRKGLKAMATKTGHGYT 319

Query: 79  TAIRHCTEEIESTSSNHTKALARLLRATVYIFTSQSTKAIEDLTQLVEDTSVDPKIKVNA 138
            A       +E       +A A  +R T       +  A++D+ + +E   + P +   +
Sbjct: 320 EAAAAFDRAVELGDLGEHEAFAYNMRGTFSYLKGDNEDALKDMDKSIE---LQPTL-TQS 375

Query: 139 HIKRAVVHLHAASDFTKAFADLDEAEK--VDPNVADSYYQRGQIYCLFGQYEEALRNLDK 196
            IKRA +HL  A+            E+   DP++   +Y R Q++ +  ++ EA ++  K
Sbjct: 376 FIKRASMHLELANPEAAEADFAAALEQNSTDPDI---FYHRAQLHFIKSEFGEAAKDYQK 432

Query: 197 TIALNPNFHVARAQRHFVVHKMIVPGDRERVEQSLKEFRNFVDTHSNVVEACTLFAQVLV 256
           +I L+ +F  +  Q     +KM        +  S+  FR  +   S V +    + ++L+
Sbjct: 433 SIDLDKDFIFSHIQLGVTQYKM------GSIASSMATFRRCMKNFSQVPDVYNYYGELLL 486

Query: 257 DQEDFDGAEEYFNRSIRVDPENASL------YVHRAMLMLQARGNVDEAIKLIEKAISID 310
           DQ+ +  A E F+ ++ ++  +  L       +++A+ + Q + + DEA KL EKA+ ID
Sbjct: 487 DQQKYQEAIEKFDTAVEMEKTSKPLGMNVLPLINKALALFQWKNDFDEAEKLCEKALIID 546

Query: 311 KSCMFAYETLGTIEVQRGRLEEAVKCFNKALPLARDEAELSHIYSLRDAAIAQMKVCERY 370
             C  A  T+  + +Q+G++ EA+K F +A  L+R E E+ +  S  +A   Q++V E+Y
Sbjct: 547 PECDIAVATMAQLLLQQGKVTEALKYFERAAELSRTEGEIVNALSYAEATRTQLEVQEKY 606


>gi|296417464|ref|XP_002838377.1| hypothetical protein [Tuber melanosporum Mel28]
 gi|295634307|emb|CAZ82568.1| unnamed protein product [Tuber melanosporum]
          Length = 604

 Score =  117 bits (293), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 103/389 (26%), Positives = 185/389 (47%), Gaps = 38/389 (9%)

Query: 8   QHAKEEISKRSFFKPSKQFIKTYLKSFPNDPILQPDGLSNGVELTNGDTNESHELDLLSK 67
           +  K  +++R    PS  F+  YL+SF + P   P GL     +  G  +    L L + 
Sbjct: 238 EKGKRMLAERPKKLPSSTFVSNYLQSFRSRP--PPPGLEEDANIPEGTGDYHLRLGLEAV 295

Query: 68  AKRAFEHEDYLTAIRHCTEEIESTSSNHTKALARLLRATVYIFTSQSTKAIEDLTQLVED 127
            ++  E   Y  A R     +E   +NH +A A   R T       + +A++DL   +E 
Sbjct: 296 ERKTVE--GYEEAGREFELAVE-LETNH-EAYALNWRGTFKYLRGDAAEALKDLNGSIE- 350

Query: 128 TSVDPKIKVNAHIKRAVVHLH------AASDFTKAFADLDEAEKVDPNVADSYYQRGQIY 181
             +DP +   ++IKRA + L       AA+DF  A     E    DP++   YY R Q++
Sbjct: 351 --LDPTM-TQSYIKRASMLLEIGNREGAAADFATAL----EHNADDPDI---YYHRAQLH 400

Query: 182 CLFGQYEEALRNLDKTIALNPNFHVARAQRHFVVHKMIVPGDRERVEQSLKEFRNFVDTH 241
            +  ++ EA ++  K+I L+ +F  +  Q     +KM        V  S+  FR  +   
Sbjct: 401 FILSEFAEAAKDYQKSIDLDHSFIFSHIQLGVTQYKM------GSVASSMATFRKCIKNF 454

Query: 242 SNVVEACTLFAQVLVDQEDFDGAEEYFNRSIRVD------PENASLYVHRAMLMLQARGN 295
               +    + ++L+DQ+ +  A E F+ ++ ++        N    +++A+ + Q + +
Sbjct: 455 ETTPDVYNYYGELLLDQQKYLEAIEKFDTAVEMERTAKPMAMNVLPLINKALALFQWKQD 514

Query: 296 VDEAIKLIEKAISIDKSCMFAYETLGTIEVQRGRLEEAVKCFNKALPLARDEAELSHIYS 355
             EA KL E+A+ ID  C  A  T+  + +Q+G++ +A+K F KA  L+R E E+ +  S
Sbjct: 515 FTEAEKLCERALIIDPDCDIAVATMAQLLLQQGKVTDALKYFEKAATLSRTEGEIINALS 574

Query: 356 LRDAAIAQMKVCERYNIKKKVSPRSQNIT 384
             +A   Q++V E+Y    +++ R Q +T
Sbjct: 575 YAEATRTQLEVQEKY---PQLANRLQGMT 600


>gi|426192258|gb|EKV42195.1| hypothetical protein AGABI2DRAFT_212302 [Agaricus bisporus var.
           bisporus H97]
          Length = 597

 Score =  117 bits (292), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 100/372 (26%), Positives = 169/372 (45%), Gaps = 33/372 (8%)

Query: 8   QHAKEEISKRSFFKPSKQFIKTYLKSFPNDPILQ-PDGLSNGVELTNGDTNESHELDLLS 66
           + A E I  R    PS  FI  Y  +F   P+   P+  S G +              L 
Sbjct: 235 EKAAEIIKSREPRLPSYTFISAYFAAFRERPLPTLPENPSQGDQT-------------LI 281

Query: 67  KAKRAFEHEDYLTAIRHCTEE-IESTSSNHTKALARLLRATVYIFTSQSTKAIEDLTQLV 125
            A  A +  DY  A+    E  +++ S+   +A A  LR T          A  DL    
Sbjct: 282 LALEALQAADYAHALSFVNEAFVQNLSTTQGEAEALNLRGTFKFLMGDVDGAKADLE--- 338

Query: 126 EDTSVDPKIKVNAHIKRAVVHLHAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFG 185
           E   + P     + +K A VH+    D  KAF   ++A K +PN AD YY RGQ+  +  
Sbjct: 339 ESIKLAPGF-TQSLVKIASVHMEQG-DPQKAFQCFEDAIKSNPNDADIYYHRGQVLFIMN 396

Query: 186 QYEEALRNLDKTIALNPNFHVARAQRHFVVHKMIVPGDRERVEQSLKEFRNFVDTHSNVV 245
           +Y++A  N  K+  L+  F  +  Q     +K        ++  S+  FR  + +  N  
Sbjct: 397 EYDDAAENYTKSSELDDTFVFSHIQLAVAQYKA------GKIANSMATFRRTIKSFPNRS 450

Query: 246 EACTLFAQVLVDQEDFDGAEEYFNRSIRVD-------PENASLYVHRAMLMLQARGNVDE 298
           E    + ++L+DQ  F+ A E F+++I ++       P N    V++ +   Q + ++  
Sbjct: 451 EPHNYYGELLLDQGRFEDAIEKFDKAIELEKSKAPPHPPNVLSLVNKGLATYQWKQDISA 510

Query: 299 AIKLIEKAISIDKSCMFAYETLGTIEVQRGRLEEAVKCFNKALPLARDEAELSHIYSLRD 358
           A K  ++A+ ID  C  A  TL  + +Q+ R+E+AV+ F + + LAR E EL +  + + 
Sbjct: 511 AEKCCDEALKIDPECEAAVATLAQLNLQQSRIEKAVEMFERQVDLARSEPELVNALTYQY 570

Query: 359 AAIAQMKVCERY 370
           A+ +Q++  ++Y
Sbjct: 571 ASKSQLEFLQKY 582



 Score = 42.4 bits (98), Expect = 0.69,   Method: Compositional matrix adjust.
 Identities = 21/54 (38%), Positives = 31/54 (57%)

Query: 463 SDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNF 516
            D  KAF   ++A K +PN AD YY RGQ+  +  +Y++A  N  K+  L+  F
Sbjct: 362 GDPQKAFQCFEDAIKSNPNDADIYYHRGQVLFIMNEYDDAAENYTKSSELDDTF 415


>gi|330907183|ref|XP_003295736.1| hypothetical protein PTT_02579 [Pyrenophora teres f. teres 0-1]
 gi|311332728|gb|EFQ96166.1| hypothetical protein PTT_02579 [Pyrenophora teres f. teres 0-1]
          Length = 630

 Score =  115 bits (289), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 93/360 (25%), Positives = 170/360 (47%), Gaps = 31/360 (8%)

Query: 22  PSKQFIKTYLKSFPNDPILQPDGLSNGVELTNGDTNESHELDLLSKAKRAFEHE---DYL 78
           PS  F+  YL+SF   P   P+GL +  EL     +E      L K  +A   +    Y 
Sbjct: 269 PSPTFVTNYLQSFRPKPT--PEGLEDDAEL-----DEESGKGQLRKGLKAMATKTGHGYT 321

Query: 79  TAIRHCTEEIESTSSNHTKALARLLRATVYIFTSQSTKAIEDLTQLVEDTSVDPKIKVNA 138
            A       +E       +A A  +R T       +  A++D+ + +E   + P +   +
Sbjct: 322 EAAAAFDRAVELGDLGEHEAFAYNMRGTFSYLKGDNEDALKDMDKSIE---LQPTL-TQS 377

Query: 139 HIKRAVVHLHAASDFTKAFADLDEAEK--VDPNVADSYYQRGQIYCLFGQYEEALRNLDK 196
            IKRA +HL  A+            E+   DP++   +Y R Q++ +  ++ EA ++  K
Sbjct: 378 FIKRASMHLELANPEAAEADFAAALEQNSTDPDI---FYHRAQLHFIKSEFGEAAKDYQK 434

Query: 197 TIALNPNFHVARAQRHFVVHKMIVPGDRERVEQSLKEFRNFVDTHSNVVEACTLFAQVLV 256
           +I L+ +F  +  Q     +KM        +  S+  FR  +   S V +    + ++L+
Sbjct: 435 SIDLDKDFIFSHIQLGVTQYKM------GSIASSMATFRRCMKNFSQVPDVYNYYGELLL 488

Query: 257 DQEDFDGAEEYFNRSIRVDPENASL------YVHRAMLMLQARGNVDEAIKLIEKAISID 310
           DQ+ +  A E F+ ++ ++  +  L       +++A+ + Q + + D+A KL EKA+ ID
Sbjct: 489 DQQKYQEAIEKFDTAVEMEKTSKPLGMNVLPLINKALALFQWKNDFDDAEKLCEKALIID 548

Query: 311 KSCMFAYETLGTIEVQRGRLEEAVKCFNKALPLARDEAELSHIYSLRDAAIAQMKVCERY 370
             C  A  T+  + +Q+G++ EA+K F +A  L+R E E+ +  S  +A   Q++V E+Y
Sbjct: 549 PECDIAVATMAQLLLQQGKVTEALKYFERAAELSRTEGEIVNALSYAEATRTQLEVQEKY 608


>gi|302912770|ref|XP_003050773.1| predicted protein [Nectria haematococca mpVI 77-13-4]
 gi|256731711|gb|EEU45060.1| predicted protein [Nectria haematococca mpVI 77-13-4]
          Length = 613

 Score =  115 bits (288), Expect = 6e-23,   Method: Compositional matrix adjust.
 Identities = 97/369 (26%), Positives = 171/369 (46%), Gaps = 21/369 (5%)

Query: 8   QHAKEEISKRSFFKPSKQFIKTYLKSFPNDPILQPDGLSNGVELTNGDTNESHELDLLSK 67
           Q AKE ++ R    PS  F+  YL+SF   P  +P GL    EL         ++ L + 
Sbjct: 240 QKAKEMMASRPPKLPSPIFVGNYLQSFRPKP--RPAGLEESEELDPETGKGQMQIGLEAL 297

Query: 68  AKRAFEHEDYLTAIRHCTEEIESTSSNHTKALARLLRATVYIFTSQSTKAIEDLTQLVED 127
            K+    + Y  A +   + +E       +ALA  +R T          A  D  + +E 
Sbjct: 298 EKKT--GDGYEEARQAFEKALELGDLGEYEALAYNMRGTFRTLLGNHADATNDFDKSIE- 354

Query: 128 TSVDPKIKVNAHIKRAVVHLHAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQY 187
             +DP +   ++IKRA + L    +  KA A+  +A + D N  D YY R Q + + G  
Sbjct: 355 --LDPTM-TQSYIKRASISLELG-EPDKAEAEFAKALEQDNNDPDVYYHRAQAHFIKGDL 410

Query: 188 EEALRNLDKTIALNPNFHVARAQRHFVVHKMIVPGDRERVEQSLKEFRNFVDTHSNVVEA 247
            +A ++  K+I L+ +F  +  Q     +KM        +  S+  FR  +     V + 
Sbjct: 411 ADAQKDYQKSIDLDKDFIFSHIQLGVTQYKM------GSIASSMATFRRCIKNFPKVPDV 464

Query: 248 CTLFAQVLVDQEDFDGAEEYFNRSIRVDPENASL------YVHRAMLMLQARGNVDEAIK 301
              + ++L+DQ +F  A E F+ ++ ++ +   +       +++A+ + Q + +  EA  
Sbjct: 465 YNYYGELLLDQGNFSEAVEKFDTAMEMEKQTKPMSMNVLPLINKALALFQWKQDFKEAEA 524

Query: 302 LIEKAISIDKSCMFAYETLGTIEVQRGRLEEAVKCFNKALPLARDEAELSHIYSLRDAAI 361
           L +KA+ ID  C  A  T+  + +Q+  +  A+K F +A  LAR E E+ +  S  +A  
Sbjct: 525 LCQKALIIDPECDIAVATMAQLLLQQNNVPAALKYFERAAELARTEGEIVNALSYAEATR 584

Query: 362 AQMKVCERY 370
            Q++V E+Y
Sbjct: 585 TQVQVTEKY 593


>gi|393230766|gb|EJD38367.1| mitochondrial outer membrane translocase receptor TOM70, partial
           [Auricularia delicata TFB-10046 SS5]
          Length = 490

 Score =  115 bits (287), Expect = 8e-23,   Method: Compositional matrix adjust.
 Identities = 96/354 (27%), Positives = 160/354 (45%), Gaps = 25/354 (7%)

Query: 22  PSKQFIKTYLKSFPNDPILQPDGLSNGVELTNGDTNESHELDLLSKAKRAFEHEDYLTAI 81
           P+  FI  +  SF   P  QP   +   + T GD      LD L+       H   L AI
Sbjct: 142 PTPTFIAAFFASF--RPRTQPKP-ALPEDPTQGDKTFDLALDALAAGDYTHCHTLTLEAI 198

Query: 82  RHCTEEIESTSSNHTKALARLLRATVYIFTSQSTKAIEDLTQLVEDTSVDPKIKVNAHIK 141
                  +  S+   KA A  L+ T +     +  A        E     P    N+H+K
Sbjct: 199 E------QGISTALAKAYALNLKGTFFFLMGDTPSAK---VAFEESIKALPSF-TNSHVK 248

Query: 142 RAVVHLHAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALN 201
            A VH+    D     A  + A   +P  AD YYQRGQ+Y + G + +A  N  ++I L+
Sbjct: 249 LASVHMDLG-DVAGTMAQYEAALAANPKDADVYYQRGQVYFIMGDFNKAAENYHESIKLD 307

Query: 202 PNFHVARAQRHFVVHKMIVPGDRERVEQSLKEFRNFVDTHSNVVEACTLFAQVLVDQEDF 261
            +F  +  Q     +K+   G+   V  S+ EFR  +     + E    + ++L+DQ  F
Sbjct: 308 DSFVFSHIQLAVAHYKL---GN---VGPSMAEFRRTMRNFPKMSEPFNYYGELLLDQGKF 361

Query: 262 DGAEEYFNRSIRVDP-----ENASLYVHRAMLMLQARGNVDEAIKLIEKAISIDKSCMFA 316
           D A + F+ +I ++      +N    V++ + + Q + + + A +L ++A+ ID  C  A
Sbjct: 362 DEAVKKFDEAIELEKAKPTHQNVLPLVNKGLTLFQWKNDFEAAERLCKEALEIDPECEAA 421

Query: 317 YETLGTIEVQRGRLEEAVKCFNKALPLARDEAELSHIYSLRDAAIAQMKVCERY 370
             TLG + +Q  RL+EA + F + + ++R E EL +  + + A  AQ+   + Y
Sbjct: 422 VATLGQLLLQHARLQEACEMFARHVSISRSEQELQNTLNYKLATEAQLAFVKNY 475



 Score = 43.1 bits (100), Expect = 0.40,   Method: Compositional matrix adjust.
 Identities = 22/66 (33%), Positives = 34/66 (51%), Gaps = 3/66 (4%)

Query: 463 SDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNF---HVA 519
            D     A  + A   +P  AD YYQRGQ+Y + G + +A  N  ++I L+ +F   H+ 
Sbjct: 257 GDVAGTMAQYEAALAANPKDADVYYQRGQVYFIMGDFNKAAENYHESIKLDDSFVFSHIQ 316

Query: 520 RAQRHF 525
            A  H+
Sbjct: 317 LAVAHY 322


>gi|396496548|ref|XP_003844770.1| hypothetical protein LEMA_P000780.1 [Leptosphaeria maculans JN3]
 gi|312221351|emb|CBY01291.1| hypothetical protein LEMA_P000780.1 [Leptosphaeria maculans JN3]
          Length = 746

 Score =  114 bits (285), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 93/358 (25%), Positives = 166/358 (46%), Gaps = 27/358 (7%)

Query: 22  PSKQFIKTYLKSFPNDPILQPDGLSNGVELTNGDTNESHELDLLSKAKRAFE---HEDYL 78
           PS  F+  YL+SF   P   P GL++  EL     +E      L K  RA      E Y 
Sbjct: 384 PSPTFVTNYLQSFRPKP--SPAGLTDEDEL-----DEETGKGQLRKGLRAMATKTGEGYN 436

Query: 79  TAIRHCTEEIESTSSNHTKALARLLRATVYIFTSQSTKAIEDLTQLVEDTSVDPKIKVNA 138
            A       +E       +A A  +R T       +  A+ D+ + +E   + P +   +
Sbjct: 437 DAAAAFVRAVELGDLGEHEAFAYNMRGTFSYLKGDNEDALRDMDKSIE---LQPTL-TQS 492

Query: 139 HIKRAVVHLHAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTI 198
            IKRA +HL  A+            E+ + N  D YY R Q++ +  ++ EA ++  K+I
Sbjct: 493 FIKRASMHLELANPDAAEADFAAALEQ-NANDPDIYYHRAQLHFIKSEFGEAAKDYQKSI 551

Query: 199 ALNPNFHVARAQRHFVVHKMIVPGDRERVEQSLKEFRNFVDTHSNVVEACTLFAQVLVDQ 258
            L+ +F  +  Q     +KM        +  S+  FR  +   S V +    + ++L+DQ
Sbjct: 552 DLDKDFIFSHIQLGVTQYKM------GSIASSMATFRRCMKNFSTVPDVYNYYGELLLDQ 605

Query: 259 EDFDGAEEYFNRSIRVDPENASL------YVHRAMLMLQARGNVDEAIKLIEKAISIDKS 312
           + +  A E F+ ++ ++  +  +       +++A+ + Q + +  EA KL E A+ ID  
Sbjct: 606 QKYQEAVEKFDTAVEMEKTSKPMGMNVLPLINKALALFQWKNDFSEAEKLCEMALIIDPE 665

Query: 313 CMFAYETLGTIEVQRGRLEEAVKCFNKALPLARDEAELSHIYSLRDAAIAQMKVCERY 370
           C  A  T+  + +Q+G++ +A+K F +A  L+R E E+ +  S  +A   Q++V E+Y
Sbjct: 666 CDIAVATMAQLLLQQGKVTDALKYFERAAELSRTEGEIVNALSYAEATRTQLEVQEKY 723


>gi|434402457|ref|YP_007145342.1| Tfp pilus assembly protein PilF [Cylindrospermum stagnale PCC 7417]
 gi|428256712|gb|AFZ22662.1| Tfp pilus assembly protein PilF [Cylindrospermum stagnale PCC 7417]
          Length = 496

 Score =  114 bits (285), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 102/417 (24%), Positives = 175/417 (41%), Gaps = 46/417 (11%)

Query: 128 TSVDPKIKVNAHIKRAVVHLHAA----SDFTKAFADLDEAEKVDPNVADSYYQRGQIYCL 183
           T  D  IK N +  +A  +   A     D   A  D D+A  ++PN AD+YY RG     
Sbjct: 84  TDYDQAIKTNPNDAQAYYNRGNARAELGDMPGAITDYDQAININPNFADAYYNRGNARAE 143

Query: 184 FGQYEEALRNLDKTIALNPNFHVARAQRHFVVHKMIVPGDRERVEQSLKEFRNFVDTHSN 243
            G    A+ + D+ I +NPNF VA   R     K+   GD   ++ ++ +F   ++ + N
Sbjct: 144 LGDMPGAITDYDQAIKINPNFAVAYYNRGNARAKL---GD---MQGAITDFNQAININPN 197

Query: 244 VVEACTLFAQVLVDQEDFDGAEEYFNRSIRVDPENASLYVHRAMLMLQARGNVDEAIKLI 303
             EA T    +  +  D  GA    N++I+++P  A  Y +R  L  +  G++  AI  +
Sbjct: 198 YAEAYTNRGTLRAELGDMQGAITDLNQAIKINPNFAKAYYNRGTLRGKL-GDMQGAITDL 256

Query: 304 EKAISIDKSCMFAYETLGTIEVQRGRLEEAVKCFNKALPLARDEAELSHIYSLRDAAIAQ 363
            +AI I+ +   AY   G    + G ++ A+  FN+A+    ++    +  +   A +  
Sbjct: 257 NQAIKINPNYTEAYGNRGNARAELGDMQTAITDFNQAIKTNPNDPLPYNNRANARAKLGD 316

Query: 364 MK-VCERYNIKKKVSPRSQNITKNEKLAIKQLRENNDIIIRPADKGGKTVVMDKADYTQK 422
           M+     +N    ++P   N  KN      +L +    I                DY Q 
Sbjct: 317 MQGAITDFNQAININPNYANAYKNRGFVRAKLGDMQGAIT---------------DYNQA 361

Query: 423 MTSILNSNDYEIIPGDPTKTIEESEKYGNLENESGQKHAASDFTKAFADLDEAEKVDPNV 482
           +   +N N               ++ Y N  N    ++   D   A  D ++A  ++PN 
Sbjct: 362 IN--INPN--------------YADAYFNRGNA---RYKLGDMQGAITDYNQAININPNF 402

Query: 483 ADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQRHFVWTSTLAELMAFSD 539
           AD+Y+ RG      G  + A+ + ++ I +NPNF  A   R     +   +  A +D
Sbjct: 403 ADAYFNRGNARYKLGDMQGAITDYNQAININPNFADAYLNRGIASLALGDKQGAIAD 459



 Score = 72.0 bits (175), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 79/350 (22%), Positives = 143/350 (40%), Gaps = 12/350 (3%)

Query: 170 VADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQRHFVVHKMI-VPGDRERVE 228
           + D+   RG      G  +  + + D+ I  NPN   A   R     ++  +PG     +
Sbjct: 62  LTDTLLNRGNARDKLGNKQAQITDYDQAIKTNPNDAQAYYNRGNARAELGDMPGAITDYD 121

Query: 229 QSLKEFRNFVDTHSNVVEACTLFAQVLVDQEDFDGAEEYFNRSIRVDPENASLYVHRAML 288
           Q++    NF D + N   A            D  GA   ++++I+++P  A  Y +R   
Sbjct: 122 QAININPNFADAYYNRGNARAELG-------DMPGAITDYDQAIKINPNFAVAYYNRGNA 174

Query: 289 MLQARGNVDEAIKLIEKAISIDKSCMFAYETLGTIEVQRGRLEEAVKCFNKALPLARDEA 348
             +  G++  AI    +AI+I+ +   AY   GT+  + G ++ A+   N+A+ +  + A
Sbjct: 175 RAKL-GDMQGAITDFNQAININPNYAEAYTNRGTLRAELGDMQGAITDLNQAIKINPNFA 233

Query: 349 ELSHIYSLRDAAIAQMK-VCERYNIKKKVSPRSQNITKNEKLAIKQLRENNDIIIRPADK 407
           +  +        +  M+      N   K++P       N   A  +L +     I   ++
Sbjct: 234 KAYYNRGTLRGKLGDMQGAITDLNQAIKINPNYTEAYGNRGNARAELGD-MQTAITDFNQ 292

Query: 408 GGKTVVMDKADYTQKMTSILNSNDYEIIPGDPTKTIEESEKYGNLENESGQKHAA-SDFT 466
             KT   D   Y  +  +     D +    D  + I  +  Y N     G   A   D  
Sbjct: 293 AIKTNPNDPLPYNNRANARAKLGDMQGAITDFNQAININPNYANAYKNRGFVRAKLGDMQ 352

Query: 467 KAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNF 516
            A  D ++A  ++PN AD+Y+ RG      G  + A+ + ++ I +NPNF
Sbjct: 353 GAITDYNQAININPNYADAYFNRGNARYKLGDMQGAITDYNQAININPNF 402


>gi|452983251|gb|EME83009.1| hypothetical protein MYCFIDRAFT_203480 [Pseudocercospora fijiensis
           CIRAD86]
          Length = 611

 Score =  114 bits (284), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 91/360 (25%), Positives = 169/360 (46%), Gaps = 29/360 (8%)

Query: 22  PSKQFIKTYLKSFPNDPILQPDGLSNGVELTNGDTNESHELDLLSKAKRAFEHEDYLTAI 81
           PS  F+  YL+SF   P+  P GL    +L  G + + H    L K  +A          
Sbjct: 252 PSPTFVSNYLQSFRAKPL--PAGLEETADLEEG-SGKWH----LRKGLQAIRLRTAEGYA 304

Query: 82  RHCTEEIESTSSNHTK---ALARLLRATVYIFTSQSTKAIEDLTQLVEDTSVDPKIKVNA 138
                  ++    + +   A A  +R T       + +A+EDL + +E   +DP + V +
Sbjct: 305 EAAEAFEKAIEQGNLEKFEAEAYNMRGTFRYLRGDNDRALEDLNKSIE---LDPSL-VQS 360

Query: 139 HIKRAVVHLHAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTI 198
           ++KRA +HL  ++    A  D + A K +P   D YY R Q++ +  ++ +A  +  K+I
Sbjct: 361 YVKRASMHLEQSAR-EAAANDFETATKHNPEDPDIYYHRAQLHFILSEFSDAANDYQKSI 419

Query: 199 ALNPNFHVARAQRHFVVHKMIVPGDRERVEQSLKEFRNFVDTHSNVVEACTLFAQVLVDQ 258
            L+ +F  +  Q     +KM        V  S+  FR  +    +  +    + ++L+DQ
Sbjct: 420 ELDKDFIFSHIQLGVTQYKM------GSVASSMATFRRCIKNFGDKSDVYNYYGELLLDQ 473

Query: 259 EDFDGAEEYFNRSIRVDPE--------NASLYVHRAMLMLQARGNVDEAIKLIEKAISID 310
           + +  A E F  ++ ++ +        N    +++A+ + Q + +   A +L  KA+ ID
Sbjct: 474 QKYQEAVEKFETAVEMEKKAVGEKGGMNVLPLINKALALFQWKQDFSAAEELCSKALIID 533

Query: 311 KSCMFAYETLGTIEVQRGRLEEAVKCFNKALPLARDEAELSHIYSLRDAAIAQMKVCERY 370
             C  A  T+  + +Q+G++ EA+K F +A  L+R E E+ +  S  +A   Q++V E+Y
Sbjct: 534 PECDIAVATMAQLLLQQGKVTEALKYFERAAELSRTEGEIVNALSYAEATRTQLEVQEKY 593


>gi|398409146|ref|XP_003856038.1| hypothetical protein MYCGRDRAFT_65354 [Zymoseptoria tritici IPO323]
 gi|339475923|gb|EGP91014.1| hypothetical protein MYCGRDRAFT_65354 [Zymoseptoria tritici IPO323]
          Length = 624

 Score =  114 bits (284), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 94/370 (25%), Positives = 170/370 (45%), Gaps = 24/370 (6%)

Query: 10  AKEEISKRSFFKPSKQFIKTYLKSFPNDPILQPDGLSNGVELTNGDTNESHELDLLSKAK 69
           AK  + K+    PS  F+  YL+SF    +  P GL     L            LL+   
Sbjct: 251 AKTILEKKEKKLPSPTFVSNYLQSFRTKEL--PAGLEESANLQEEGGKWYLRKGLLAMKL 308

Query: 70  RAFEHEDYLTAIRHCTEEIESTSSNHTKALARLLRATVYIFTSQSTKAIEDLTQLVEDTS 129
           R    E Y  A     E +        +ALA  +R T      ++  A+EDL + +E   
Sbjct: 309 RT--GEGYAEASESFDEAVARNELQSYEALAYNMRGTFRYLRGENVTALEDLNKSIE--- 363

Query: 130 VDPKIKVNAHIKRAVVHLHAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEE 189
           +DP + V +++KRA +HL   S    A  D + A   +P+  D YY R Q++ +  ++  
Sbjct: 364 LDPTL-VQSYVKRASMHLEQ-SLRDAAATDFETAATHNPDDPDIYYHRAQLHFILSEFSL 421

Query: 190 ALRNLDKTIALNPNFHVARAQRHFVVHKMIVPGDRERVEQSLKEFRNFVDTHSNVVEACT 249
           A  +  K+I L+ +F  +  Q     +KM        V  S+  FR  +    +  +   
Sbjct: 422 AATDYQKSIELDKDFIFSHIQLGVTQYKM------GSVASSMATFRRCIKNFGDKSDVYN 475

Query: 250 LFAQVLVDQEDFDGAEEYFNRSIRVDPE---------NASLYVHRAMLMLQARGNVDEAI 300
            + ++L+DQ+ +  A E F+ ++ ++ +         N    +++A+ + Q + +   A 
Sbjct: 476 YYGELLLDQQKYQEAVEKFDTAVEMERKTIGERGGGMNVLPLINKALALFQWKQDYSSAE 535

Query: 301 KLIEKAISIDKSCMFAYETLGTIEVQRGRLEEAVKCFNKALPLARDEAELSHIYSLRDAA 360
           +L +KA+ ID  C  A  T+  + +Q+G++ +A+  F +A  L+R E E+ +  S  +A 
Sbjct: 536 ELCQKALIIDPECDIAVATMAQLLLQQGKVTDALTYFERAAELSRTEGEIVNALSYAEAT 595

Query: 361 IAQMKVCERY 370
             Q++V E+Y
Sbjct: 596 RTQLEVQEKY 605


>gi|169604955|ref|XP_001795898.1| hypothetical protein SNOG_05494 [Phaeosphaeria nodorum SN15]
 gi|160706673|gb|EAT86558.2| hypothetical protein SNOG_05494 [Phaeosphaeria nodorum SN15]
          Length = 623

 Score =  113 bits (283), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 92/357 (25%), Positives = 165/357 (46%), Gaps = 35/357 (9%)

Query: 22  PSKQFIKTYLKSF-PNDPILQPDGLSNGVELTNGDTNESHELDLLSKAKRAFEHEDYLTA 80
           PS  F+  YL+SF P  P   P+GL +  EL            L + A +    + Y  A
Sbjct: 271 PSPTFVTNYLQSFRPKPP---PEGLEDDAELDEESGKGQLRKGLQAMATKT--GDGYTEA 325

Query: 81  IRHCTEEIESTSSNHTKALARLLRATVYIFTSQSTKAIEDLTQLVEDTSVDPKIKVNAHI 140
                  +E       +A A  +R T       +  A++D+ + +   S+ P +   + I
Sbjct: 326 AAAFDRALELGDLGEHEAFAYNMRGTFSYLKGDNEDALQDMDKSI---SLQPTL-TQSFI 381

Query: 141 KRAVVHLH------AASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNL 194
           KRA +HL       A SDF  A     E    DP++   +Y R Q++ +  ++ EA ++ 
Sbjct: 382 KRASMHLELANPDAAESDFAAAL----EQNASDPDI---FYHRAQLHFIKSEFGEAAKDY 434

Query: 195 DKTIALNPNFHVARAQRHFVVHKMIVPGDRERVEQSLKEFRNFVDTHSNVVEACTLFAQV 254
            K+I L+ +F  +  Q     +KM        +  S+  FR  +    NV +    + ++
Sbjct: 435 QKSIDLDKDFIFSHIQLGVTQYKM------GSIASSMATFRRCMKNFQNVPDVYNYYGEL 488

Query: 255 LVDQEDFDGAEEYFNRSIRVDPENASL------YVHRAMLMLQARGNVDEAIKLIEKAIS 308
           L+DQ+ +  A E F+ ++ ++     L       +++A+ + Q + +  +A KL EKA+ 
Sbjct: 489 LLDQQKYQEAIEKFDTAVEMEKSTKPLGMNVLPLINKALALFQWKNDFSDAEKLCEKALI 548

Query: 309 IDKSCMFAYETLGTIEVQRGRLEEAVKCFNKALPLARDEAELSHIYSLRDAAIAQMK 365
           ID  C  A  T+  + +Q+G++ EA+K F +A  L+R E E+ +  S  +A   Q++
Sbjct: 549 IDPECDIAVATMAQLLLQQGKVTEALKYFERAAELSRTEGEIVNALSYAEATRTQLE 605


>gi|388581571|gb|EIM21879.1| mitochondrial outer membrane translocase receptor TOM70 [Wallemia
           sebi CBS 633.66]
          Length = 567

 Score =  113 bits (282), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 96/369 (26%), Positives = 181/369 (49%), Gaps = 31/369 (8%)

Query: 22  PSKQFIKTYLKSF-PNDPILQPDGLSNGVELTNGDTNESHELDLLSKAKRAFEHEDYLTA 80
           P   FI+ YL +F    P   PD    G            +LDL  +A  A E +D+  +
Sbjct: 221 PQISFIQAYLNAFRERTPTAIPDDSPAG------------DLDL-KEAFNASEAKDFKLS 267

Query: 81  IRHCTEEI-ESTSSNHTKALARLLRATVYIFTSQSTKAIEDLTQLVEDTSVDPKIKVNAH 139
                E + +  SS   +A A  LR T Y   +   KAI DL + VE   + P+    + 
Sbjct: 268 RTKVEESLSKGLSSTQLEAEALNLRGTFYFLLNNPVKAIADLEKSVE---LWPEFS-QSW 323

Query: 140 IKRAVVHLHAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIA 199
           +K A V++  A+    AF   D A + +P  AD++Y RGQ+Y +   + +A+ N +K++ 
Sbjct: 324 VKAASVYMELANP-QAAFKAFDTAIEKNPVDADAFYHRGQVYFILSDFNKAIENYEKSVE 382

Query: 200 LNPNFHVARAQRHFVVHKMIVPGDRERVEQSLKEFRNFVDTHSNVVEACTLFAQVLVDQE 259
           ++ +F +A+ Q     +K         + +++  FR+ +       +  T + ++L+DQ 
Sbjct: 383 IDDSFPLAQIQLAVAQYK------NGNIAKAMVIFRSSIKKFPAKSDVYTYYGELLMDQG 436

Query: 260 DFDGAEEYFNRSIRVD----PENASLYVHRAMLMLQARGNVDEAIKLIEKAISIDKSCMF 315
            F+ A E F+++I +D    P N    +++A+ + Q + +   A  L+ +A++ D     
Sbjct: 437 KFEEAVEKFDKAIELDGDKYPVNVLPKINKALAIFQWKQDFAGAESLVREAVASDPENDV 496

Query: 316 AYETLGTIEVQRGRLEEAVKCFNKALPLARDEAELSHIYSLRDAAIAQMKVCERY-NIKK 374
           A  TL  + +Q+G+++EA++ F K+  ++R E EL +  +  +A  AQ    + + +   
Sbjct: 497 AIGTLAQLCLQQGKIDEAIEAFEKSAQVSRTEPELVNAITYENATRAQAHFIKNHPSAAA 556

Query: 375 KVSPRSQNI 383
           K+ P +Q++
Sbjct: 557 KLGPLAQSM 565



 Score = 44.7 bits (104), Expect = 0.12,   Method: Compositional matrix adjust.
 Identities = 29/93 (31%), Positives = 50/93 (53%), Gaps = 8/93 (8%)

Query: 438 DPTKTIEESEKYGNLENESGQKH--AASDFTK------AFADLDEAEKVDPNVADSYYQR 489
           +P K I + EK   L  E  Q    AAS + +      AF   D A + +P  AD++Y R
Sbjct: 301 NPVKAIADLEKSVELWPEFSQSWVKAASVYMELANPQAAFKAFDTAIEKNPVDADAFYHR 360

Query: 490 GQIYCLFGQYEEALRNLDKTIALNPNFHVARAQ 522
           GQ+Y +   + +A+ N +K++ ++ +F +A+ Q
Sbjct: 361 GQVYFILSDFNKAIENYEKSVEIDDSFPLAQIQ 393


>gi|403412187|emb|CCL98887.1| predicted protein [Fibroporia radiculosa]
          Length = 602

 Score =  112 bits (279), Expect = 6e-22,   Method: Compositional matrix adjust.
 Identities = 98/373 (26%), Positives = 169/373 (45%), Gaps = 31/373 (8%)

Query: 6   GAQHAKEEISKRSFFKPSKQFIKTYLKSFPNDPILQ-PDGLSNGVELTNGDTNESHELDL 64
            +Q  +E +S R    PS+ F+  Y  +F   P+ Q P+  S G           H L L
Sbjct: 238 ASQKVQEILSSRDRHLPSQTFVSAYFGAFRPRPLPQLPENPSQG----------DHTLIL 287

Query: 65  LSKAKRAFEHEDYLTAIRHCTEEIESTSSNHTKALARLLRATVYIFTSQSTKAIEDLTQL 124
             +A  A ++   LT +    E+    S +  KA A  LR T     +  T A ED    
Sbjct: 288 SLEALAASDYTHSLTLVNEAVEQ--GISWDAGKAEALNLRGTYKFLMTDVTGAKEDFLAS 345

Query: 125 VEDTSVDPKIKVNAHIKRAVVHLHAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLF 184
           +E   + P +     +K A V++    D  KAF   +EA K + +  D YY RGQ+  + 
Sbjct: 346 IE---LQPSL-TQTWVKIASVYMEQG-DPKKAFECFEEAIKHNADDPDIYYHRGQVLFIM 400

Query: 185 GQYEEALRNLDKTIALNPNFHVARAQRHFVVHKMIVPGDRERVEQSLKEFRNFVDTHSNV 244
            ++ +A  N  K+  L+  F  +  Q     +K         +  S+  FR  +      
Sbjct: 401 NEFADAAENYTKSTELDDQFVFSHIQLAVAQYK------SGNLANSMATFRRTLKGFPQR 454

Query: 245 VEACTLFAQVLVDQEDFDGAEEYFNRSIRVD-------PENASLYVHRAMLMLQARGNVD 297
            E    + ++L+DQ+ F+ A + F+R+I ++       P NA   V++ + + Q + ++ 
Sbjct: 455 SEPQNYYGELLLDQQRFEDAVDKFDRAIEIELSRPKPPPVNALPQVNKGLALYQWKQDIG 514

Query: 298 EAIKLIEKAISIDKSCMFAYETLGTIEVQRGRLEEAVKCFNKALPLARDEAELSHIYSLR 357
            A    ++A+ ID  C  A  TL  + +Q+G+++ A++ F K   LAR E EL +  + +
Sbjct: 515 AAEHCCQEALKIDPECEAAVATLAQLSLQQGKIDVAMEMFEKQASLARSEPELMNALTYQ 574

Query: 358 DAAIAQMKVCERY 370
            A  AQ++   R+
Sbjct: 575 FATKAQVEFMTRF 587


>gi|392559548|gb|EIW52732.1| ADP/ATP carrier receptor, partial [Trametes versicolor FP-101664
           SS1]
          Length = 594

 Score =  111 bits (277), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 100/355 (28%), Positives = 157/355 (44%), Gaps = 29/355 (8%)

Query: 22  PSKQFIKTYLKSFPNDPILQPDGLSNGVELTNGDTNESHELDLLSKAKRAFEHEDYLTAI 81
           PS  F   Y  +F   P+L  D   N    T GD+     L+ L  A       DY  A 
Sbjct: 249 PSHMFTSAYFGAFRPRPVL--DLPENH---TTGDSTLRMALEALRAA-------DYAHAF 296

Query: 82  RHCTEEIE-STSSNHTKALARLLRATVYIFTSQSTKAIEDLTQLVEDTSVDPKIKVNAHI 140
               E IE   S +  KA A  LR T     +    A  D  Q +E   + P       +
Sbjct: 297 TLVNESIEQGISWDAGKAEALNLRGTFKFLMTDIEGAKADFLQSIE---LAPSF-TQTWV 352

Query: 141 KRAVVHLHAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIAL 200
           K A V++    D  KAF   ++A K +PN  D YY RGQ+  +  ++ EA  N  K+  L
Sbjct: 353 KIASVYMEQG-DPKKAFECFEDAIKHNPNDPDIYYHRGQVLFIMNEFAEAAENYTKSTEL 411

Query: 201 NPNFHVARAQRHFVVHKMIVPGDRERVEQSLKEFRNFVDTHSNVVEACTLFAQVLVDQED 260
           +  F  +  Q     +K         +  S+  FR  +       E    + ++L+DQ+ 
Sbjct: 412 DNQFVFSHIQLAVAQYK------SGNLANSMATFRRTLQAFPTRSEPHNYYGELLLDQQR 465

Query: 261 FDGAEEYFNRSIRVD-----PENASLYVHRAMLMLQARGNVDEAIKLIEKAISIDKSCMF 315
           +  A + F+ +I ++     P N    V++ + + Q+  NV+ A K  ++A+ ID  C  
Sbjct: 466 YPEAIQKFDNAIEIERAKAPPMNVLPMVNKGLAIFQSEQNVEAAEKCCQEALEIDPECEA 525

Query: 316 AYETLGTIEVQRGRLEEAVKCFNKALPLARDEAELSHIYSLRDAAIAQMKVCERY 370
           A  TL  + +Q+G+++ A+K F++   LAR E EL    + + A  AQ+K  E Y
Sbjct: 526 AVATLAQLSLQQGKIDVALKMFDRQANLARSEPELISALTYQFATQAQVKFMESY 580



 Score = 39.3 bits (90), Expect = 6.1,   Method: Compositional matrix adjust.
 Identities = 20/54 (37%), Positives = 29/54 (53%)

Query: 463 SDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNF 516
            D  KAF   ++A K +PN  D YY RGQ+  +  ++ EA  N  K+  L+  F
Sbjct: 362 GDPKKAFECFEDAIKHNPNDPDIYYHRGQVLFIMNEFAEAAENYTKSTELDNQF 415


>gi|254417224|ref|ZP_05030969.1| tetratricopeptide repeat domain protein [Coleofasciculus
           chthonoplastes PCC 7420]
 gi|196176030|gb|EDX71049.1| tetratricopeptide repeat domain protein [Coleofasciculus
           chthonoplastes PCC 7420]
          Length = 600

 Score =  110 bits (276), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 115/463 (24%), Positives = 194/463 (41%), Gaps = 36/463 (7%)

Query: 76  DYLTAIRHCTEEIESTSSNHTKALARLLRATVYIFTSQSTKAIEDLTQLVEDTSVDPKIK 135
           DY  AI   T+ I+    N   A+A   R           +AI D  Q ++    D    
Sbjct: 122 DYQGAIADYTQAIQL---NPDDAIAYNNRGLARSNLGDYEEAIADFAQAIQLNPDDATAY 178

Query: 136 VNAHIKRAVVHLHAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLD 195
            N  + R+ +      D+  A AD  +A K++P+ AD+Y  RG        Y+ A+ +  
Sbjct: 179 YNRGLARSDL-----GDYQGAIADYTQAIKINPDYADAYNNRGNARSNLEDYQGAIADYT 233

Query: 196 KTIALNPNFHVARAQRHFVVHKMIVPGDRERVEQSLKEFRNFVDTHSNVVEACTLFAQVL 255
           + I LNP+   A + R           D E  + ++ +F   +  + +   A        
Sbjct: 234 QAIQLNPDDAKAYSNRGAARS------DLEDYQGAIADFNQAIQINPDFAYAYNNRGVAR 287

Query: 256 VDQEDFDGAEEYFNRSIRVDPENASLYVHRAMLMLQAR---GNVDEAIKLIEKAISIDKS 312
            D ED+ GA   FN++I+++P+ A+ Y +R      AR   G+   AI    +AI ++  
Sbjct: 288 SDLEDYQGAIADFNQAIQINPDYANAYYNRG----NARSDLGDDQGAIADFNQAIQLNPD 343

Query: 313 CMFAYETLGTIEVQRGRLEEAVKCFNKALPLARDEAELSHIYSL--RDAAIAQMKVCERY 370
             +AY   G      G  EEA+  F +A+ L  D+A   +   L   D    Q  + + Y
Sbjct: 344 FAYAYYNRGNARSNLGDYEEAIADFAQAIQLNPDDATAYYNRGLARSDLGDDQGAIAD-Y 402

Query: 371 NIKKKVSPRSQNITKNEKLAIKQLRENNDIIIRPADKGGKTVVMD--KADYTQKMTSILN 428
           N   +++P       N  LA   L ++   +   AD      +     A Y  +  +  +
Sbjct: 403 NQAIQINPDLAAAYNNRGLARSNLGDDQGAL---ADYNQAIQINPDLAAAYNNRGLARSD 459

Query: 429 SNDYEIIPGDPTKTI----EESEKYGNLENESGQKHAASDFTKAFADLDEAEKVDPNVAD 484
             DY+    D  + I    ++++ Y N  N    +    D+  A AD  +A K++P  AD
Sbjct: 460 LGDYQEAIADFNQAIKINPDDADAYYNRGNA---RSNLGDYQGAIADFTQAIKINPGDAD 516

Query: 485 SYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQRHFVW 527
           +YY RG      G Y+ A+ + ++ I LNP++  A   R   +
Sbjct: 517 AYYNRGNARSDLGDYQGAIADYNQAIKLNPDYAAAYGNRGLAY 559



 Score = 80.9 bits (198), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 86/390 (22%), Positives = 162/390 (41%), Gaps = 42/390 (10%)

Query: 151 SDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQ 210
            D+  A AD ++A ++ PN A+ YY R   Y     Y+ A+ + ++ I +NP++ +A   
Sbjct: 53  GDYQGAIADYNQALQLSPNNAEVYYLRANAYYQLENYQGAIADFNQAIKINPDYAIAYYN 112

Query: 211 RHFVVHKMIVPGDRERVEQSLKEFRNFVDTHSNVVEACTLFAQVLVDQEDFDGAEEYFNR 270
           R      +   GD    + ++ ++   +  + +   A         +  D++ A   F +
Sbjct: 113 RGLARSNL---GD---YQGAIADYTQAIQLNPDDAIAYNNRGLARSNLGDYEEAIADFAQ 166

Query: 271 SIRVDPENASLYVHRAMLMLQARGNVDEAIKLIEKAISIDKSCMFAYETLGTIEVQRGRL 330
           +I+++P++A+ Y +R  L     G+   AI    +AI I+     AY   G         
Sbjct: 167 AIQLNPDDATAYYNRG-LARSDLGDYQGAIADYTQAIKINPDYADAYNNRGNARSNLEDY 225

Query: 331 EEAVKCFNKALPLARDEAELSHIYSLRDAAIAQMKVCERYNIKKKVSPRSQNITKNEKLA 390
           + A+  + +A+ L  D+A+    YS R AA + ++     + +  ++  +Q I  N   A
Sbjct: 226 QGAIADYTQAIQLNPDDAK---AYSNRGAARSDLE-----DYQGAIADFNQAIQINPDFA 277

Query: 391 IKQLRENNDIIIRPADKGGKTVVMDKADYTQKMTSILNSNDYEIIPGDPTKTIEESEKYG 450
                                       Y  +  +  +  DY+    D  + I+ +  Y 
Sbjct: 278 YA--------------------------YNNRGVARSDLEDYQGAIADFNQAIQINPDYA 311

Query: 451 N-LENESGQKHAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKT 509
           N   N    +    D   A AD ++A +++P+ A +YY RG      G YEEA+ +  + 
Sbjct: 312 NAYYNRGNARSDLGDDQGAIADFNQAIQLNPDFAYAYYNRGNARSNLGDYEEAIADFAQA 371

Query: 510 IALNPNFHVARAQRHFVWTSTLAELMAFSD 539
           I LNP+   A   R    +    +  A +D
Sbjct: 372 IQLNPDDATAYYNRGLARSDLGDDQGAIAD 401



 Score = 71.6 bits (174), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 73/319 (22%), Positives = 140/319 (43%), Gaps = 18/319 (5%)

Query: 214 VVHKMIVPGDRERVEQSLKEFRNFVDTHSNVVEACTLFAQVLVDQEDFDGAEEYFNRSIR 273
           +++   +  ++   + ++ ++   +    N  E   L A      E++ GA   FN++I+
Sbjct: 42  LINSARIKAEKGDYQGAIADYNQALQLSPNNAEVYYLRANAYYQLENYQGAIADFNQAIK 101

Query: 274 VDPENASLYVHRAMLMLQARGNVDE---AIKLIEKAISIDKSCMFAYETLGTIEVQRGRL 330
           ++P+ A  Y +R +    AR N+ +   AI    +AI ++     AY   G      G  
Sbjct: 102 INPDYAIAYYNRGL----ARSNLGDYQGAIADYTQAIQLNPDDAIAYNNRGLARSNLGDY 157

Query: 331 EEAVKCFNKALPLARDEAELSHIYSL--RDAAIAQMKVCERYNIKKKVSPRSQNITKNEK 388
           EEA+  F +A+ L  D+A   +   L   D    Q  + + Y    K++P   +   N  
Sbjct: 158 EEAIADFAQAIQLNPDDATAYYNRGLARSDLGDYQGAIAD-YTQAIKINPDYADAYNNRG 216

Query: 389 LAIKQLRENNDIIIRPADKGGKTVVMDKAD---YTQKMTSILNSNDYEIIPGDPTKTIEE 445
            A   L +    I   AD   + + ++  D   Y+ +  +  +  DY+    D  + I+ 
Sbjct: 217 NARSNLEDYQGAI---ADY-TQAIQLNPDDAKAYSNRGAARSDLEDYQGAIADFNQAIQI 272

Query: 446 SEKYGNLENESG-QKHAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALR 504
           +  +    N  G  +    D+  A AD ++A +++P+ A++YY RG      G  + A+ 
Sbjct: 273 NPDFAYAYNNRGVARSDLEDYQGAIADFNQAIQINPDYANAYYNRGNARSDLGDDQGAIA 332

Query: 505 NLDKTIALNPNFHVARAQR 523
           + ++ I LNP+F  A   R
Sbjct: 333 DFNQAIQLNPDFAYAYYNR 351



 Score = 43.5 bits (101), Expect = 0.31,   Method: Compositional matrix adjust.
 Identities = 23/79 (29%), Positives = 41/79 (51%)

Query: 451 NLENESGQKHAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTI 510
           NL N +  K    D+  A AD ++A ++ PN A+ YY R   Y     Y+ A+ + ++ I
Sbjct: 41  NLINSARIKAEKGDYQGAIADYNQALQLSPNNAEVYYLRANAYYQLENYQGAIADFNQAI 100

Query: 511 ALNPNFHVARAQRHFVWTS 529
            +NP++ +A   R    ++
Sbjct: 101 KINPDYAIAYYNRGLARSN 119


>gi|218438344|ref|YP_002376673.1| hypothetical protein PCC7424_1361 [Cyanothece sp. PCC 7424]
 gi|218171072|gb|ACK69805.1| TPR repeat-containing protein [Cyanothece sp. PCC 7424]
          Length = 1276

 Score =  110 bits (276), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 103/422 (24%), Positives = 198/422 (46%), Gaps = 26/422 (6%)

Query: 110 FTSQSTKAIEDLTQLVEDTSVDPKIKVNAHIKRAVVHLHAASDFTKAFADLDEAEKVDPN 169
           F +Q+ +A  D  + V   +++P  KV A   + VV L       +A    ++A +++ N
Sbjct: 29  FNAQNYQAALDALEQV--LTLEPN-KVEAWNGQGVV-LFNLGKHQEALQSFNKALELNSN 84

Query: 170 VADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQRHFVVHKMIVPGDRERVEQ 229
            A+++  RG      G+YEEAL   DK + LNPN+  A + R FV+ K+      ER ++
Sbjct: 85  EANAWNYRGVALLHLGKYEEALSTFDKALELNPNYAEALSNRGFVLGKL------ERYQE 138

Query: 230 SLKEFRNFVDTHSNVVEACTLFAQVLVDQEDFDGAEEYFNRSIRVDPENASLYVHRAMLM 289
           +L  F   ++ + N  EA       L   E +  A + +++++ ++P NA  + +R +  
Sbjct: 139 ALPTFDKALELNPNYAEALFNRGVALERLERYQEAFQSYDKALELNPNNAVAWNYRGV-- 196

Query: 290 LQARGNVD---EAIKLIEKAISIDKSCMFAYETLGTIEVQRGRLEEAVKCFNKALPLARD 346
             A G ++   EA+   +KA+ ++ +    +   G   V   R +EA++ + KAL L  +
Sbjct: 197 --ALGKLERYQEALPTFDKALELNPNNAEVWFNRGVALVNLERYQEALQSYEKALKLNPN 254

Query: 347 EAELSHIYSLRDAAIAQM----KVCERYNIKKKVSPRSQNITKNEKLAIKQLRENNDIII 402
             E    ++ R  A+  +    +  E ++  ++++P +     N  +A+++L E      
Sbjct: 255 YGE---AWNYRGVALESLERYQEALEAFDKARELNPNNAESWNNRGVALEKL-ERYQEAF 310

Query: 403 RPADKGGKTVVMDKADYTQKMTSILNSNDYEIIPGDPTKTIEESEKYGNLENESGQKHAA 462
           +  D+  +  + D   +  +   +     YE       + I+ +  Y    N  G     
Sbjct: 311 QSYDQAIQLNLNDAQAWYNRGFPLGKLERYEEAFQSFDQAIKLNPNYAEAWNYRGLALGN 370

Query: 463 SD-FTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARA 521
            + + +AF   D+A K++PN A+++Y +G    +  +YEEA +  D+ I LNPN   A  
Sbjct: 371 LERYEEAFQSYDQAIKLNPNYAEAWYNQGVALGMLERYEEAFQFYDQAIKLNPNHAQAWN 430

Query: 522 QR 523
            R
Sbjct: 431 NR 432



 Score = 99.0 bits (245), Expect = 6e-18,   Method: Compositional matrix adjust.
 Identities = 88/387 (22%), Positives = 181/387 (46%), Gaps = 22/387 (5%)

Query: 145 VHLHAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNF 204
           V L     + +AF   D+A +++ N A ++Y RG       +YEEA ++ D+ I LNPN+
Sbjct: 298 VALEKLERYQEAFQSYDQAIQLNLNDAQAWYNRGFPLGKLERYEEAFQSFDQAIKLNPNY 357

Query: 205 HVARAQRHFVVHKMIVPGDRERVEQSLKEFRNFVDTHSNVVEACTLFAQVLVDQEDFDGA 264
             A   R   +      G+ ER E++ + +   +  + N  EA       L   E ++ A
Sbjct: 358 AEAWNYRGLAL------GNLERYEEAFQSYDQAIKLNPNYAEAWYNQGVALGMLERYEEA 411

Query: 265 EEYFNRSIRVDPENASLYVHRAMLMLQARGNVD---EAIKLIEKAISIDKSCMFAYETLG 321
            ++++++I+++P +A  + +R +    A GN++   EA +  +KAI ++ +   A+   G
Sbjct: 412 FQFYDQAIKLNPNHAQAWNNRGV----ALGNLERYEEAFQSFDKAIKLNPNHAEAWYNQG 467

Query: 322 TIEVQRGRLEEAVKCFNKALPLARDEAELSHIYSLRDAAIAQMK----VCERYNIKKKVS 377
               +  R +EA++ +++A+ L  + AE    +  +  A+ +++      + Y+   K++
Sbjct: 468 VALGKLERYQEALQSYDQAIKLNPNYAE---AWYNQGVALGKLERYQEALQSYDQAIKLN 524

Query: 378 PRSQNITKNEKLAIKQLRENNDIIIRPADKGGKTVVMDKADYTQKMTSILNSNDYEIIPG 437
           P       N   A+  L E      +  DK  +    D   +  +  S+ N   Y+    
Sbjct: 525 PNYAEAWYNRGFALGNL-ECYQEAFQSFDKAIQLNPNDAEAWNNRGFSLRNLERYQEALQ 583

Query: 438 DPTKTIEESEKYGN-LENESGQKHAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLF 496
              K I+ +  Y   L N          + +AF   D+A +++PN  +++Y RG +    
Sbjct: 584 SYDKAIQLNPNYAEALFNRGVALERLERYEEAFQSFDKAIQLNPNNTEAWYNRGVVLGKL 643

Query: 497 GQYEEALRNLDKTIALNPNFHVARAQR 523
            +++EA+ + D+ + +  +F++A   R
Sbjct: 644 ERHQEAIASYDQALVIKRDFYLAWINR 670



 Score = 97.1 bits (240), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 100/422 (23%), Positives = 191/422 (45%), Gaps = 24/422 (5%)

Query: 129 SVDPKIKVNAHIKRAV----VHLHAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLF 184
           + D  +++N +   A+    V L     + +AF   D+A +++PN A ++  RG      
Sbjct: 142 TFDKALELNPNYAEALFNRGVALERLERYQEAFQSYDKALELNPNNAVAWNYRGVALGKL 201

Query: 185 GQYEEALRNLDKTIALNPNFHVARAQRHFVVHKMIVPGDRERVEQSLKEFRNFVDTHSNV 244
            +Y+EAL   DK + LNPN     A+  F  ++ +   + ER +++L+ +   +  + N 
Sbjct: 202 ERYQEALPTFDKALELNPN----NAEVWF--NRGVALVNLERYQEALQSYEKALKLNPNY 255

Query: 245 VEACTLFAQVLVDQEDFDGAEEYFNRSIRVDPENASLYVHRAMLMLQARGNVDEAIKLIE 304
            EA       L   E +  A E F+++  ++P NA  + +R +  L+      EA +  +
Sbjct: 256 GEAWNYRGVALESLERYQEALEAFDKARELNPNNAESWNNRGV-ALEKLERYQEAFQSYD 314

Query: 305 KAISIDKSCMFAYETLGTIEVQRGRLEEAVKCFNKALPLARDEAELSHIYSLRDAAIAQM 364
           +AI ++ +   A+   G    +  R EEA + F++A+ L  + AE    ++ R  A+  +
Sbjct: 315 QAIQLNLNDAQAWYNRGFPLGKLERYEEAFQSFDQAIKLNPNYAE---AWNYRGLALGNL 371

Query: 365 KVCER----YNIKKKVSPRSQNITKNEKLAIKQLRENNDIIIRPADKGGKTVVMDKADYT 420
           +  E     Y+   K++P       N+ +A+  L E  +   +  D+  K        + 
Sbjct: 372 ERYEEAFQSYDQAIKLNPNYAEAWYNQGVALGML-ERYEEAFQFYDQAIKLNPNHAQAWN 430

Query: 421 QKMTSILNSNDYEIIPGDPTKTIEESEKYGNLENESGQKHAASD-FTKAFADLDEAEKVD 479
            +  ++ N   YE       K I+ +  +       G      + + +A    D+A K++
Sbjct: 431 NRGVALGNLERYEEAFQSFDKAIKLNPNHAEAWYNQGVALGKLERYQEALQSYDQAIKLN 490

Query: 480 PNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQRHFVWTSTLAELMAFSD 539
           PN A+++Y +G       +Y+EAL++ D+ I LNPN+  A   R F     L  L  + +
Sbjct: 491 PNYAEAWYNQGVALGKLERYQEALQSYDQAIKLNPNYAEAWYNRGFA----LGNLECYQE 546

Query: 540 EF 541
            F
Sbjct: 547 AF 548



 Score = 95.1 bits (235), Expect = 8e-17,   Method: Compositional matrix adjust.
 Identities = 97/409 (23%), Positives = 186/409 (45%), Gaps = 24/409 (5%)

Query: 129 SVDPKIKVNAHIKRAV----VHLHAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLF 184
           S +  +K+N +   A     V L +   + +A    D+A +++PN A+S+  RG      
Sbjct: 244 SYEKALKLNPNYGEAWNYRGVALESLERYQEALEAFDKARELNPNNAESWNNRGVALEKL 303

Query: 185 GQYEEALRNLDKTIALNPNFHVARAQRHFVVHKMIVPGDRERVEQSLKEFRNFVDTHSNV 244
            +Y+EA ++ D+ I LN N   A   R F + K+      ER E++ + F   +  + N 
Sbjct: 304 ERYQEAFQSYDQAIQLNLNDAQAWYNRGFPLGKL------ERYEEAFQSFDQAIKLNPNY 357

Query: 245 VEACTLFAQVLVDQEDFDGAEEYFNRSIRVDPENASLYVHR--AMLMLQARGNVDEAIKL 302
            EA       L + E ++ A + ++++I+++P  A  + ++  A+ ML+     +EA + 
Sbjct: 358 AEAWNYRGLALGNLERYEEAFQSYDQAIKLNPNYAEAWYNQGVALGMLE---RYEEAFQF 414

Query: 303 IEKAISIDKSCMFAYETLGTIEVQRGRLEEAVKCFNKALPLARDEAELSHIYSLRDAAIA 362
            ++AI ++ +   A+   G       R EEA + F+KA+ L  + AE    +  +  A+ 
Sbjct: 415 YDQAIKLNPNHAQAWNNRGVALGNLERYEEAFQSFDKAIKLNPNHAE---AWYNQGVALG 471

Query: 363 QMK----VCERYNIKKKVSPRSQNITKNEKLAIKQLRENNDIIIRPADKGGKTVVMDKAD 418
           +++      + Y+   K++P       N+ +A+ +L E     ++  D+  K        
Sbjct: 472 KLERYQEALQSYDQAIKLNPNYAEAWYNQGVALGKL-ERYQEALQSYDQAIKLNPNYAEA 530

Query: 419 YTQKMTSILNSNDYEIIPGDPTKTIEESEKYGNLENESG-QKHAASDFTKAFADLDEAEK 477
           +  +  ++ N   Y+       K I+ +       N  G        + +A    D+A +
Sbjct: 531 WYNRGFALGNLECYQEAFQSFDKAIQLNPNDAEAWNNRGFSLRNLERYQEALQSYDKAIQ 590

Query: 478 VDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQRHFV 526
           ++PN A++ + RG       +YEEA ++ DK I LNPN   A   R  V
Sbjct: 591 LNPNYAEALFNRGVALERLERYEEAFQSFDKAIQLNPNNTEAWYNRGVV 639



 Score = 80.5 bits (197), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 58/222 (26%), Positives = 111/222 (50%), Gaps = 11/222 (4%)

Query: 129 SVDPKIKVNAHIKRAV----VHLHAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLF 184
           S D  IK+N +   A     V L     + +A    D+A K++PN A+++Y +G      
Sbjct: 448 SFDKAIKLNPNHAEAWYNQGVALGKLERYQEALQSYDQAIKLNPNYAEAWYNQGVALGKL 507

Query: 185 GQYEEALRNLDKTIALNPNFHVARAQRHFVVHKMIVPGDRERVEQSLKEFRNFVDTHSNV 244
            +Y+EAL++ D+ I LNPN+  A   R F +      G+ E  +++ + F   +  + N 
Sbjct: 508 ERYQEALQSYDQAIKLNPNYAEAWYNRGFAL------GNLECYQEAFQSFDKAIQLNPND 561

Query: 245 VEACTLFAQVLVDQEDFDGAEEYFNRSIRVDPENASLYVHRAMLMLQARGNVDEAIKLIE 304
            EA       L + E +  A + ++++I+++P  A    +R +  L+     +EA +  +
Sbjct: 562 AEAWNNRGFSLRNLERYQEALQSYDKAIQLNPNYAEALFNRGV-ALERLERYEEAFQSFD 620

Query: 305 KAISIDKSCMFAYETLGTIEVQRGRLEEAVKCFNKALPLARD 346
           KAI ++ +   A+   G +  +  R +EA+  +++AL + RD
Sbjct: 621 KAIQLNPNNTEAWYNRGVVLGKLERHQEAIASYDQALVIKRD 662



 Score = 44.7 bits (104), Expect = 0.12,   Method: Compositional matrix adjust.
 Identities = 22/60 (36%), Positives = 35/60 (58%)

Query: 467 KAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQRHFV 526
           +A    ++A +++ N A+++  RG      G+YEEAL   DK + LNPN+  A + R FV
Sbjct: 70  EALQSFNKALELNSNEANAWNYRGVALLHLGKYEEALSTFDKALELNPNYAEALSNRGFV 129



 Score = 43.1 bits (100), Expect = 0.34,   Method: Compositional matrix adjust.
 Identities = 22/94 (23%), Positives = 51/94 (54%), Gaps = 4/94 (4%)

Query: 129 SVDPKIKVNAHIKRAV----VHLHAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLF 184
           S D  I++N +   A+    V L     + +AF   D+A +++PN  +++Y RG +    
Sbjct: 584 SYDKAIQLNPNYAEALFNRGVALERLERYEEAFQSFDKAIQLNPNNTEAWYNRGVVLGKL 643

Query: 185 GQYEEALRNLDKTIALNPNFHVARAQRHFVVHKM 218
            +++EA+ + D+ + +  +F++A   R  +++ +
Sbjct: 644 ERHQEAIASYDQALVIKRDFYLAWINRGNLIYSL 677


>gi|390595071|gb|EIN04478.1| ADP/ATP carrier receptor [Punctularia strigosozonata HHB-11173 SS5]
          Length = 588

 Score =  110 bits (274), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 102/371 (27%), Positives = 169/371 (45%), Gaps = 33/371 (8%)

Query: 8   QHAKEEISKRSFFKPSKQFIKTYLKSFPNDPILQPDGLSNGVELTNGDTNESHELDLLSK 67
           + A+E +  R    PS  F+  Y  +F + P+  P    N      GD+     L+ L  
Sbjct: 228 KKAEEILQHREKRLPSFTFVSAYFAAFRSRPL--PTLPENP---QTGDSTLILALEALGA 282

Query: 68  AKRAFEHEDYLTAIRHCTEEIE-STSSNHTKALARLLRATVYIFTSQSTKAIEDLTQLVE 126
           A       DY  ++    E +E   S +  KA A  LR T          A +DL     
Sbjct: 283 A-------DYTHSLSLVNEALEQGISWDAGKAEALNLRGTFKFLVGDVLGAKDDL----- 330

Query: 127 DTSVD--PKIKVNAHIKRAVVHLHAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLF 184
             S+D  P     + +K A V++    D  KAF   +EA K +PN  D YY RGQ+  + 
Sbjct: 331 QASIDLVPAF-TQSWVKIASVYMEQG-DPRKAFECFEEAIKHNPNDPDIYYHRGQVLFIM 388

Query: 185 GQYEEALRNLDKTIALNPNFHVARAQRHFVVHKMIVPGDRERVEQSLKEFRNFVDTHSNV 244
            ++ +A  N  K+ +L+  F  +  Q     +K    GD   + +S+  FR  +      
Sbjct: 389 NEFAQAAENYTKSTSLDDQFVFSHIQLAVAQYKS---GD---LAKSMATFRKTLRAFPQR 442

Query: 245 VEACTLFAQVLVDQEDFDGAEEYFNRSIRVD-----PENASLYVHRAMLMLQARGNVDEA 299
            E    + ++L+DQ  F+ A E F+++I ++     P N    V++ + + Q + ++  A
Sbjct: 443 SEPQNYYGELLLDQGRFEDAVEKFDKAIELEKAKPPPMNVLPLVNKGLALYQWKQDIGAA 502

Query: 300 IKLIEKAISIDKSCMFAYETLGTIEVQRGRLEEAVKCFNKALPLARDEAELSHIYSLRDA 359
            +  E+A+ ID  C  A  TL  + +Q+G++ +AV+ F +   LAR E EL +  + + A
Sbjct: 503 ERCCEEALKIDAECEAAVATLAQLSLQQGKIGDAVELFRRQSELARSEPELVNALTYQYA 562

Query: 360 AIAQMKVCERY 370
           + AQM   E Y
Sbjct: 563 SAAQMVFVENY 573



 Score = 40.0 bits (92), Expect = 3.3,   Method: Compositional matrix adjust.
 Identities = 20/54 (37%), Positives = 30/54 (55%)

Query: 463 SDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNF 516
            D  KAF   +EA K +PN  D YY RGQ+  +  ++ +A  N  K+ +L+  F
Sbjct: 355 GDPRKAFECFEEAIKHNPNDPDIYYHRGQVLFIMNEFAQAAENYTKSTSLDDQF 408


>gi|19114679|ref|NP_593767.1| mitochondrial TOM complex subunit Tom70 (predicted)
           [Schizosaccharomyces pombe 972h-]
 gi|60390861|sp|O14217.1|TOM70_SCHPO RecName: Full=Probable mitochondrial import receptor subunit tom70;
           AltName: Full=Translocase of outer membrane 40 kDa
           subunit
 gi|2330842|emb|CAB11072.1| mitochondrial TOM complex subunit Tom70 (predicted)
           [Schizosaccharomyces pombe]
          Length = 625

 Score =  108 bits (271), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 92/355 (25%), Positives = 168/355 (47%), Gaps = 29/355 (8%)

Query: 22  PSKQFIKTYLKSFPNDPILQPDGLSNGVELTNGDTNESHELDLLSKAKRAFEHEDYLTAI 81
           P+  FI+TYL SF      QP  L +     +GD   +   + L K +       Y  A 
Sbjct: 283 PAASFIQTYLDSFH----AQPKPLFDNK--FDGDAALAEAYEYLEKGEYQL---SYDKAK 333

Query: 82  RHCTEEIESTSSNHTKALARLLRATVYIFTSQSTKAIEDLTQLVEDTSVDPKIKVNAHIK 141
             C     S S N   A    L  T    +  S  ++E+    ++   +D K  +  +I+
Sbjct: 334 ESCLGSFSSPSVN---ARTHNLVGTFKFVSGDSKGSMENFNAAIK---LDRKF-IQPYIR 386

Query: 142 RAVVHLHAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALN 201
            +  +L   +D  K +  L++AE VD   +D YY R Q+  + G++ EA+ +  K+IAL+
Sbjct: 387 LSAAYLDE-NDNEKMWKVLNDAESVDKTDSDLYYHRAQVRFVSGEFAEAISDYQKSIALD 445

Query: 202 PNFHVARAQRHFVVHKMIVPGDRERVEQSLKEFRNFVDTHSNVVEACTLFAQVLVDQEDF 261
            +F  +  Q     +K         + +S+K F +      N  E    F ++L+DQ+ F
Sbjct: 446 DSFIYSHIQLGVAQYKT------HAIAESMKTFEDCKKRFPNSSEVYNYFGEILLDQQKF 499

Query: 262 DGAEEYFNRSIRVDPE------NASLYVHRAMLMLQARGNVDEAIKLIEKAISIDKSCMF 315
           D A + F+ +I ++        +A   +++A+ + Q + ++ +A  L  +A+S D  C  
Sbjct: 500 DDAVKNFDHAIELEKREHLTIMSAMPLINKALAVFQWKKDISQAENLCRQALSADPECDI 559

Query: 316 AYETLGTIEVQRGRLEEAVKCFNKALPLARDEAELSHIYSLRDAAIAQMKVCERY 370
           A  ++    +Q+G+  EA++ F K+  LAR E+E+ + +S  +A   Q+ + E+Y
Sbjct: 560 AIASMAQFLLQQGKAREALEYFEKSAQLARTESEMVNAFSYAEATRTQIALTEKY 614



 Score = 41.2 bits (95), Expect = 1.5,   Method: Compositional matrix adjust.
 Identities = 20/53 (37%), Positives = 33/53 (62%)

Query: 464 DFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNF 516
           D  K +  L++AE VD   +D YY R Q+  + G++ EA+ +  K+IAL+ +F
Sbjct: 396 DNEKMWKVLNDAESVDKTDSDLYYHRAQVRFVSGEFAEAISDYQKSIALDDSF 448


>gi|392588651|gb|EIW77983.1| ADP ATP carrier receptor [Coniophora puteana RWD-64-598 SS2]
          Length = 590

 Score =  108 bits (269), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 100/363 (27%), Positives = 164/363 (45%), Gaps = 45/363 (12%)

Query: 22  PSKQFIKTYLKSF--------PNDPILQPDGLSNGVELTNGDTNESHELDLLSKAKRAFE 73
           PS  F+  Y  +F        P DP             T GD       + L  A +A E
Sbjct: 244 PSFTFVSAYFAAFRPRPLPTLPEDP-------------TTGD-------NTLIMALQALE 283

Query: 74  HEDYLTAIRHCTEEIE-STSSNHTKALARLLRATVYIFTSQSTKAIEDLTQLVEDTSVDP 132
             +Y  ++    E IE   S +  +A A  LR T          A EDL+   E   + P
Sbjct: 284 ASNYPHSVTLVNEAIEQGISFDAGRAEALNLRGTFKFLMGDVDGAKEDLS---ESIKLVP 340

Query: 133 KIKVNAHIKRAVVHLHAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALR 192
                + +K A VH+    + T AF   +EA K +P+ AD YY RGQ+  +  ++E+A  
Sbjct: 341 SY-TQSWVKIASVHMEQGDNKT-AFDCFEEAIKHNPDDADIYYHRGQVLFITNEFEQAAE 398

Query: 193 NLDKTIALNPNFHVARAQRHFVVHKMIVPGDRERVEQSLKEFRNFVDTHSNVVEACTLFA 252
           N  K+ +L  NF  +  Q     +KM   G+   V +++  FR+ +       E    + 
Sbjct: 399 NYTKSTSLESNFVFSHIQLAVAQYKM---GN---VGKAMATFRSTLTAFPQRSEPQNYYG 452

Query: 253 QVLVDQEDFDGAEEYFNRSIRVD-----PENASLYVHRAMLMLQARGNVDEAIKLIEKAI 307
           ++L+DQ+ F  A E F+R+I ++     P N    V++ + + Q+  ++  A     +A+
Sbjct: 453 ELLLDQQRFKEAIEKFDRAIELERAKPPPMNVLALVNKGLAVFQSTQDIAAAEACCVEAL 512

Query: 308 SIDKSCMFAYETLGTIEVQRGRLEEAVKCFNKALPLARDEAELSHIYSLRDAAIAQMKVC 367
            ID  C  A  TL  + +Q+ R++ A++ F +   LAR E EL +  + + A+ AQ+   
Sbjct: 513 EIDPECEPAVATLAQLSLQQSRIDRAIEMFARQTELARSEIELVNAITYQYASRAQLDFV 572

Query: 368 ERY 370
           E Y
Sbjct: 573 ENY 575



 Score = 41.2 bits (95), Expect = 1.3,   Method: Compositional matrix adjust.
 Identities = 21/53 (39%), Positives = 31/53 (58%)

Query: 464 DFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNF 516
           D   AF   +EA K +P+ AD YY RGQ+  +  ++E+A  N  K+ +L  NF
Sbjct: 358 DNKTAFDCFEEAIKHNPDDADIYYHRGQVLFITNEFEQAAENYTKSTSLESNF 410


>gi|268325019|emb|CBH38607.1| conserved hypothetical protein, containing tetratricopeptide
           repeats [uncultured archaeon]
          Length = 425

 Score =  107 bits (268), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 99/380 (26%), Positives = 163/380 (42%), Gaps = 22/380 (5%)

Query: 144 VVHLHAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPN 203
            +    + ++ KA    D+  +++PN A SYY RG +Y +  QYE A+ + +KTI L P 
Sbjct: 38  AIGFAMSGEYKKAIECFDKVIELNPNSAGSYYNRGLVYKILKQYERAIEDFNKTIELIPT 97

Query: 204 FHVARAQRHFVVHKMIVPGDRERVEQSLKEFRNFVDTHSNVVEACTLFAQVLVDQEDFDG 263
           F  A   R      +      ++ E+++++F   ++   N   A         D + ++ 
Sbjct: 98  FAGAYINRGDAYKNL------KQYERAIEDFNKTIELDPNYALAYNNRGTAYSDLKQYER 151

Query: 264 AEEYFNRSIRVDPENASLYVHRAMLMLQARGNVDEAIKLIEKAISIDKSCMFAYETLGTI 323
           A E FN++I +DP  A  Y +R       +   + AI+   K I +     FAY   G  
Sbjct: 152 AIEDFNKTIELDPNYALAYNNRGTAYSDLK-QYERAIEDFNKTIELIPDYPFAYSNRGLT 210

Query: 324 EVQRGRLEEAVKCFNKALPLARDEAELSHIYSLRDAAIAQMKVCER----YNIKKKVSPR 379
                + E A++ FNK + L  + A     Y+ R      +K  ER    +N   ++ P 
Sbjct: 211 YDNLKQYERAIEDFNKTIELDPNSA---AAYNNRGLTYDNLKQYERAIEDFNKTIELIPN 267

Query: 380 SQNITKNEKLAIKQLRENNDIIIRPADKGGKTVVMD---KADYTQKMTSILNSNDYEIIP 436
                 N  L    L++      R  +   KT+ +D    A Y  +  +     +YE   
Sbjct: 268 HTFAYNNRGLTYNNLKQ----YERAIEDFNKTIELDPNSAAAYNNRGNAYRKLEEYERAI 323

Query: 437 GDPTKTIEESEKY-GNLENESGQKHAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCL 495
            D  KTIE    Y G+  N          + +A  D ++  ++DPN A  Y  RG  +  
Sbjct: 324 EDFNKTIELDSNYAGSYYNRGLTYDDLKQYERAIEDFNKTIELDPNSAVIYTNRGNAFKD 383

Query: 496 FGQYEEALRNLDKTIALNPN 515
            GQYE A+ + +K I L+PN
Sbjct: 384 LGQYERAIEDYNKAIELDPN 403



 Score = 97.4 bits (241), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 102/394 (25%), Positives = 167/394 (42%), Gaps = 35/394 (8%)

Query: 142 RAVVHLHAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALN 201
           +AV+ + AA      FA +  AE      A  ++ +   + + G+Y++A+   DK I LN
Sbjct: 7   KAVLIVMAALIVIGIFAPIVSAE-----TAGEWHNKAIGFAMSGEYKKAIECFDKVIELN 61

Query: 202 PNFHVARAQRHFVVHKMIVPGDRERVEQSLKEFRNFVDTHSNVVEACTLFAQVLVDQED- 260
           PN   +   R  +V+K+            LK++   ++  +  +E    FA   +++ D 
Sbjct: 62  PNSAGSYYNRG-LVYKI------------LKQYERAIEDFNKTIELIPTFAGAYINRGDA 108

Query: 261 ------FDGAEEYFNRSIRVDPENASLYVHRAMLMLQARGNVDEAIKLIEKAISIDKSCM 314
                 ++ A E FN++I +DP  A  Y +R       +   + AI+   K I +D +  
Sbjct: 109 YKNLKQYERAIEDFNKTIELDPNYALAYNNRGTAYSDLK-QYERAIEDFNKTIELDPNYA 167

Query: 315 FAYETLGTIEVQRGRLEEAVKCFNKALPLARDEAELSHIYSLRDAAIAQMKVCER----Y 370
            AY   GT      + E A++ FNK + L  D       YS R      +K  ER    +
Sbjct: 168 LAYNNRGTAYSDLKQYERAIEDFNKTIELIPD---YPFAYSNRGLTYDNLKQYERAIEDF 224

Query: 371 NIKKKVSPRSQNITKNEKLAIKQLRENNDIIIRPADKGGKTVVMDKADYTQKMTSILNSN 430
           N   ++ P S     N  L    L++  +  I   +K  + +      Y  +  +  N  
Sbjct: 225 NKTIELDPNSAAAYNNRGLTYDNLKQY-ERAIEDFNKTIELIPNHTFAYNNRGLTYNNLK 283

Query: 431 DYEIIPGDPTKTIEESEKYGNLENESGQKH-AASDFTKAFADLDEAEKVDPNVADSYYQR 489
            YE    D  KTIE         N  G  +    ++ +A  D ++  ++D N A SYY R
Sbjct: 284 QYERAIEDFNKTIELDPNSAAAYNNRGNAYRKLEEYERAIEDFNKTIELDSNYAGSYYNR 343

Query: 490 GQIYCLFGQYEEALRNLDKTIALNPNFHVARAQR 523
           G  Y    QYE A+ + +KTI L+PN  V    R
Sbjct: 344 GLTYDDLKQYERAIEDFNKTIELDPNSAVIYTNR 377



 Score = 83.2 bits (204), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 94/409 (22%), Positives = 171/409 (41%), Gaps = 34/409 (8%)

Query: 89  ESTSSNHTKALARLLRATVYIFTSQSTKAIEDLTQLVEDTSVDPKIKVNAHIKRAVVHLH 148
           E+    H KA+        +  + +  KAIE   +++E   ++P     ++  R +V+  
Sbjct: 29  ETAGEWHNKAIG-------FAMSGEYKKAIECFDKVIE---LNPN-SAGSYYNRGLVY-K 76

Query: 149 AASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVAR 208
               + +A  D ++  ++ P  A +Y  RG  Y    QYE A+ + +KTI L+PN+ +A 
Sbjct: 77  ILKQYERAIEDFNKTIELIPTFAGAYINRGDAYKNLKQYERAIEDFNKTIELDPNYALAY 136

Query: 209 AQRHFVVHKMIVPGDRERVEQSLKEFRNFVDTHSNVVEACTLFAQVLVDQEDFDGAEEYF 268
             R           D ++ E+++++F   ++   N   A         D + ++ A E F
Sbjct: 137 NNRGTAY------SDLKQYERAIEDFNKTIELDPNYALAYNNRGTAYSDLKQYERAIEDF 190

Query: 269 NRSIRVDPENASLYVHRAMLMLQARGNVDEAIKLIEKAISIDKSCMFAYETLGTIEVQRG 328
           N++I + P+    Y +R +     +   + AI+   K I +D +   AY   G       
Sbjct: 191 NKTIELIPDYPFAYSNRGLTYDNLK-QYERAIEDFNKTIELDPNSAAAYNNRGLTYDNLK 249

Query: 329 RLEEAVKCFNKALPLARDEAELSHIYSLRDAAIAQMKVCER----YNIKKKVSPRSQNIT 384
           + E A++ FNK + L  +    +  Y+ R      +K  ER    +N   ++ P S    
Sbjct: 250 QYERAIEDFNKTIELIPNH---TFAYNNRGLTYNNLKQYERAIEDFNKTIELDPNSAAAY 306

Query: 385 KNEKLAIKQLRENNDIIIRPADKGGKTVVMDK---ADYTQKMTSILNSNDYEIIPGDPTK 441
            N   A ++L E      R  +   KT+ +D      Y  +  +  +   YE    D  K
Sbjct: 307 NNRGNAYRKLEE----YERAIEDFNKTIELDSNYAGSYYNRGLTYDDLKQYERAIEDFNK 362

Query: 442 TIEESEKYGNLENESGQKHA-ASDFTKAFADLDEAEKVDPNVADSYYQR 489
           TIE       +    G        + +A  D ++A ++DPN  D+Y  R
Sbjct: 363 TIELDPNSAVIYTNRGNAFKDLGQYERAIEDYNKAIELDPNDTDAYENR 411



 Score = 82.4 bits (202), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 77/303 (25%), Positives = 137/303 (45%), Gaps = 19/303 (6%)

Query: 98  ALARLLRATVYIFTSQSTKAIEDLTQLVEDTSVDPKIKVNAHIKRAVVHLHAASDFTKAF 157
           ALA   R T Y    Q  +AIED  + +E   +DP   + A+  R   +      + +A 
Sbjct: 133 ALAYNNRGTAYSDLKQYERAIEDFNKTIE---LDPNYAL-AYNNRGTAY-SDLKQYERAI 187

Query: 158 ADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQRHFVVHK 217
            D ++  ++ P+   +Y  RG  Y    QYE A+ + +KTI L+PN   A   R      
Sbjct: 188 EDFNKTIELIPDYPFAYSNRGLTYDNLKQYERAIEDFNKTIELDPNSAAAYNNRGLTYDN 247

Query: 218 MIVPGDRERVEQSLKEFRNFVDTHSNVVEACTLFAQVLVDQEDFDGAEEYFNRSIRVDPE 277
           +      ++ E+++++F   ++   N   A         + + ++ A E FN++I +DP 
Sbjct: 248 L------KQYERAIEDFNKTIELIPNHTFAYNNRGLTYNNLKQYERAIEDFNKTIELDPN 301

Query: 278 NASLYVHRAMLMLQARGNVDEAIKLIEKAISIDKSCMFAYETLGTIEVQRGRLEEAVKCF 337
           +A+ Y +R     +     + AI+   K I +D +   +Y   G       + E A++ F
Sbjct: 302 SAAAYNNRGNAYRKLE-EYERAIEDFNKTIELDSNYAGSYYNRGLTYDDLKQYERAIEDF 360

Query: 338 NKALPLARDEAELSHIYSLRDAAIAQMKVCER----YNIKKKVSPRSQNITKNEKLAIKQ 393
           NK + L  + A    IY+ R  A   +   ER    YN   ++ P   +  +N +LA+ +
Sbjct: 361 NKTIELDPNSA---VIYTNRGNAFKDLGQYERAIEDYNKAIELDPNDTDAYENRELALSK 417

Query: 394 LRE 396
           L+E
Sbjct: 418 LKE 420


>gi|328772217|gb|EGF82256.1| hypothetical protein BATDEDRAFT_19105 [Batrachochytrium
           dendrobatidis JAM81]
          Length = 645

 Score =  107 bits (267), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 92/346 (26%), Positives = 164/346 (47%), Gaps = 22/346 (6%)

Query: 22  PSKQFIKTYLKSFPNDPILQPDGLSNGVELTNG-DTNESHELDLLSKAKRAFEHEDYLTA 80
           PS  F++ Y+ SF   P       S+   + N  DT+ES  +  L     A +   +  A
Sbjct: 301 PSGAFVRAYMDSFRATP-------SHATLVDNCQDTSES--IQALKLVFSAIKEHRWTEA 351

Query: 81  IRHCTEEIESTSSNHTK--ALARLLRATVYIFTSQSTKAIEDLTQLVEDTSVDPKIKVNA 138
             H  + I     N+TK  A+A  +R T +        +I DL + +E   +DP + VN+
Sbjct: 352 YEHAVKAIVLNDFNNTKMEAIAHNIRGTFFFLIGHIDLSIADLDKALE---LDP-VDVNS 407

Query: 139 HIKRAVVHLHAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTI 198
            IKR  + +   S+  K     + AEK++P   D +Y RGQ+  L   Y+ A+ +   +I
Sbjct: 408 IIKRGTLFMER-SEVEKTVEMFERAEKLEPTNVDLFYHRGQVRFLTADYQGAVDDYSASI 466

Query: 199 A-LNPNFHVARAQRHFVVHKMIVPGDRERVEQSLKEFRNFVDTHSNVVEACTLFAQVLVD 257
              +P            V K  + G+    E+  KE +       N  E    + ++ +D
Sbjct: 467 KNESPEESSVYVHIQMAVAKYKL-GNYAESEKKFKECKRLF---PNSAEVFNYYGEIHMD 522

Query: 258 QEDFDGAEEYFNRSIRVDPENASLYVHRAMLMLQARGNVDEAIKLIEKAISIDKSCMFAY 317
           ++    A + FN+SI +DP +   Y+++A+L L  + ++  A     KA+ +D  C  AY
Sbjct: 523 RQAHTEALKAFNKSIEMDPTSPLPYINKAILYLNWKQDLATAEAECRKALEVDPLCDIAY 582

Query: 318 ETLGTIEVQRGRLEEAVKCFNKALPLARDEAELSHIYSLRDAAIAQ 363
             L  +   + +L+EA++ ++KA+ + R + E+ ++ + R+AA AQ
Sbjct: 583 SQLAQLLCHQHKLDEAIQVYDKAITVTRTDIEVLNVVTYREAARAQ 628


>gi|409041647|gb|EKM51132.1| hypothetical protein PHACADRAFT_263126 [Phanerochaete carnosa
           HHB-10118-sp]
          Length = 597

 Score =  107 bits (266), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 100/368 (27%), Positives = 169/368 (45%), Gaps = 30/368 (8%)

Query: 10  AKEEISKRSFFK-PSKQFIKTYLKSFPNDPILQPDGLSNGVELTNGDTNESHELDLLSKA 68
           AKE ++ R   + P + FI  Y  +F   P L P    N    T+GD      LD L   
Sbjct: 235 AKEILTARPEARLPGQTFISAYFGAF--RPRLLPTLPENS---TSGDW---RLLDSL--- 283

Query: 69  KRAFEHEDYLTAIRHCTEEIE-STSSNHTKALARLLRATVYIFTSQSTKAIEDLTQLVED 127
            +A E +DY+ A+    E +E   S +  KA A  LR T    T+    A  DL   +  
Sbjct: 284 -KALEAQDYIHALTLANEALEQGISWDAGKAEALNLRGTFKFLTADVAGAKADLEASI-- 340

Query: 128 TSVDPKIKVNAHIKRAVVHLHAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQY 187
            ++ P     + +K A V +    D  K F   +EA K + N  D +Y RGQ+  + G++
Sbjct: 341 -ALVPSY-TQSWVKVASVFMEQG-DPKKTFECFEEALKHNKNDPDIFYHRGQVLFIMGKF 397

Query: 188 EEALRNLDKTIALNPNFHVARAQRHFVVHKMIVPGDRERVEQSLKEFRNFVDTHSNVVEA 247
           EEA  +  K+  L+ NF  +  Q    ++K       + + +++  FR  +       E 
Sbjct: 398 EEAANDYIKSTELDDNFVFSHIQLAVALYKT------QNLSKAMDTFRQTLQRFPQRSEP 451

Query: 248 CTLFAQVLVDQEDFDGAEEYFNRSIRVD-----PENASLYVHRAMLMLQARGNVDEAIKL 302
              + ++L+DQ  F  A E F ++I ++     P N    V++ + + Q + ++  A + 
Sbjct: 452 YNYYGELLLDQGRFQDAVEKFEKAIEIENAKPPPMNVLALVNKGLALFQWKNDIRAAEQC 511

Query: 303 IEKAISIDKSCMFAYETLGTIEVQRGRLEEAVKCFNKALPLARDEAELSHIYSLRDAAIA 362
            E+A+ ID     A  TL  + +Q+ +++ AVK F +   LAR E EL    + + A+ +
Sbjct: 512 CEEALRIDPESEAAVATLAQLSLQQNKIDVAVKLFERQADLARSEPELVSALTYKYASAS 571

Query: 363 QMKVCERY 370
           Q++    Y
Sbjct: 572 QLQFIRDY 579


>gi|389743634|gb|EIM84818.1| mitochondrial outer membrane translocase receptor TOM70 [Stereum
           hirsutum FP-91666 SS1]
          Length = 599

 Score =  106 bits (264), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 96/355 (27%), Positives = 162/355 (45%), Gaps = 30/355 (8%)

Query: 22  PSKQFIKTYLKSFPNDPILQPDGLSNGVEL-TNGDTNESHELDLLSKAKRAFEHEDYLTA 80
           PS  F+  Y  +F      +P  L    E+ T GD       + L  A +A E  DY  A
Sbjct: 254 PSYTFVSAYFAAF------RPRPLPTLPEVPTTGD-------NTLILALQALEATDYAHA 300

Query: 81  IRHCTEEI-ESTSSNHTKALARLLRATVYIFTSQSTKAIEDLTQLVEDTSVDPKIKVNAH 139
           +    E + +  S +  KA A  LR T     S    A +DL   ++   + P     + 
Sbjct: 301 LSFVNEALDQGISWDVGKAEALNLRGTFKFLMSDIEGAEQDLKASID---IVPSF-TQSW 356

Query: 140 IKRAVVHLHAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIA 199
           +K A V++   S+  K F   +EA K +    D YY RGQ+  +  Q+ EA  N  K+  
Sbjct: 357 VKIASVYMEQ-SNPQKTFECFEEAIKHNAEDPDIYYHRGQVLFIMNQFPEAAENYTKSTT 415

Query: 200 LNPNFHVARAQRHFVVHKMIVPGDRERVEQSLKEFRNFVDTHSNVVEACTLFAQVLVDQE 259
           L+  F  ++ Q     +K         +  S+  FR  +       E    + ++L+DQ+
Sbjct: 416 LDDTFVFSQIQLAVAQYK------SGNLANSMATFRRTLKAFPQRSEPQNYYGELLLDQQ 469

Query: 260 DFDGAEEYFNRSIRVD----PENASLYVHRAMLMLQARGNVDEAIKLIEKAISIDKSCMF 315
            F  A E F+R+I ++     +N    V++ + + Q + +V  A +   +A+ ID  C  
Sbjct: 470 RFSDAVEKFDRAIELEKAKPTQNVLPLVNKGLALYQWKQDVAAAERCCNEALRIDPECEA 529

Query: 316 AYETLGTIEVQRGRLEEAVKCFNKALPLARDEAELSHIYSLRDAAIAQMKVCERY 370
           A  TL  + +Q+G++++AVK F +   LAR E EL +  + + A+ AQ++  + Y
Sbjct: 530 AVATLAQLSLQQGKIDQAVKMFERHTELARSEPELINALTYQHASYAQLEFMKHY 584


>gi|395329686|gb|EJF62072.1| ADP/ATP carrier receptor [Dichomitus squalens LYAD-421 SS1]
          Length = 593

 Score =  105 bits (263), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 100/367 (27%), Positives = 160/367 (43%), Gaps = 29/367 (7%)

Query: 10  AKEEISKRSFFKPSKQFIKTYLKSFPNDPILQPDGLSNGVELTNGDTNESHELDLLSKAK 69
           A+  +S R    PS  F   Y  +F   P+  P    N    T GD      L+ L  + 
Sbjct: 236 AQSILSTREKRLPSHMFTSAYFGAFRPRPL--PALPENP---TTGDNTLILGLEALGAS- 289

Query: 70  RAFEHEDYLTAIRHCTEEIE-STSSNHTKALARLLRATVYIFTSQSTKAIEDLTQLVEDT 128
                 DY  A     E IE   S +  KA A  LR T     +    A  D    +E  
Sbjct: 290 ------DYAHAYTLVNEAIEQGISWDGGKAEALNLRGTFKFLMTDVESAKADFQASLEH- 342

Query: 129 SVDPKIKVNAHIKRAVVHLHAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYE 188
             +P +     +K A V +    D  KAF   +EA K +PN  D YY RGQ+  +  ++ 
Sbjct: 343 --EPSL-TQTWVKIASVWMEQG-DPKKAFECFEEAIKHNPNDPDIYYHRGQVLFIMNEFG 398

Query: 189 EALRNLDKTIALNPNFHVARAQRHFVVHKMIVPGDRERVEQSLKEFRNFVDTHSNVVEAC 248
           EA  N  K+  L+  F  +  Q     +K         +  S+  FR  +    +  E  
Sbjct: 399 EAAENYTKSTELDDKFVFSHIQLAVAQYK------SGNLANSMATFRRTLKAFPDRSEPQ 452

Query: 249 TLFAQVLVDQEDFDGAEEYFNRSIRVD-----PENASLYVHRAMLMLQARGNVDEAIKLI 303
             + ++L+DQ+ +  A E F+R+I ++     P N    V++ + + Q + +++ A K  
Sbjct: 453 NYYGELLLDQQRYPDAIEKFDRAIEIERAKPPPMNVLPMVNKGLALFQWKQDIEAAEKCC 512

Query: 304 EKAISIDKSCMFAYETLGTIEVQRGRLEEAVKCFNKALPLARDEAELSHIYSLRDAAIAQ 363
           ++A+ ID  C  A  TL  + +Q+G+++ A+K F+K   LAR E EL    + + A  AQ
Sbjct: 513 QEALEIDPECEAAVATLAQLSLQQGKIDVAIKMFDKQSQLARSEPELISALTYQYATDAQ 572

Query: 364 MKVCERY 370
           ++    Y
Sbjct: 573 VQFMHAY 579



 Score = 40.4 bits (93), Expect = 2.3,   Method: Compositional matrix adjust.
 Identities = 21/54 (38%), Positives = 29/54 (53%)

Query: 463 SDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNF 516
            D  KAF   +EA K +PN  D YY RGQ+  +  ++ EA  N  K+  L+  F
Sbjct: 361 GDPKKAFECFEEAIKHNPNDPDIYYHRGQVLFIMNEFGEAAENYTKSTELDDKF 414


>gi|225678726|gb|EEH17010.1| mitochondrial precursor proteins import receptor [Paracoccidioides
           brasiliensis Pb03]
          Length = 586

 Score =  105 bits (262), Expect = 7e-20,   Method: Compositional matrix adjust.
 Identities = 88/320 (27%), Positives = 148/320 (46%), Gaps = 33/320 (10%)

Query: 22  PSKQFIKTYLKSFPNDPILQPDGLSNGVELTNGDTNESHELDLLSKAKRAFEHEDYLTAI 81
           PS  F+  YL+SF   P+  PDGL   VEL    +       LL+ +K     + Y  A 
Sbjct: 284 PSATFVSNYLQSFRLRPL--PDGLGEDVELDEESSKGQLRKGLLAMSKPT--SDGYEEAA 339

Query: 82  RHCTEEIESTSSNHTKALARLLRATVYIFTSQSTKAIEDLTQLVEDTSVDPKIKVNAHIK 141
           R   + +E       +ALA  +RAT       +  A++DL + VE   + P + V ++IK
Sbjct: 340 RAFEKALELGDLGEFEALALNMRATFTYLAGDAQAALQDLNKSVE---LSPSL-VQSYIK 395

Query: 142 RAVVHLH------AASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLD 195
           RA +HL       AA DF  A A      K DP++   YY R Q++ + G+  EA ++  
Sbjct: 396 RASLHLELGNREAAADDFDLAVAQ----NKDDPDI---YYHRAQLHFILGELPEAAKDYQ 448

Query: 196 KTIALNPNFHVARAQRHFVVHKMIVPGDRERVEQSLKEFRNFVDTHSNVVEACTLFAQVL 255
           K+I L+ +F  +  Q     +KM        +  ++  FR  V     V +    + ++L
Sbjct: 449 KSIDLDRDFIYSHIQLGVTQYKM------GSIASAMATFRRSVKNFEKVSDVYNYYGELL 502

Query: 256 VDQEDFDGAEEYFNRSIRVDPENASL------YVHRAMLMLQARGNVDEAIKLIEKAISI 309
           +DQ+    A E F++++ ++  N          +++A+ + Q + +  EA  L +KA+ I
Sbjct: 503 LDQQKHAEAIEKFDKAVELEKTNKPWGINVLPLINKALALFQWKHDFTEAENLCQKALII 562

Query: 310 DKSCMFAYETLGTIEVQRGR 329
           D  C  A  TL  +   + +
Sbjct: 563 DPECDIAVATLAQLFCSKAK 582



 Score = 40.4 bits (93), Expect = 2.1,   Method: Compositional matrix adjust.
 Identities = 21/70 (30%), Positives = 37/70 (52%), Gaps = 3/70 (4%)

Query: 460 HAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALN---PNF 516
           + A D   A  DL+++ ++ P++  SY +R  ++   G  E A  + D  +A N   P+ 
Sbjct: 367 YLAGDAQAALQDLNKSVELSPSLVQSYIKRASLHLELGNREAAADDFDLAVAQNKDDPDI 426

Query: 517 HVARAQRHFV 526
           +  RAQ HF+
Sbjct: 427 YYHRAQLHFI 436


>gi|220922402|ref|YP_002497704.1| peptidase C14 caspase catalytic subunit p20 [Methylobacterium
           nodulans ORS 2060]
 gi|219947009|gb|ACL57401.1| peptidase C14 caspase catalytic subunit p20 [Methylobacterium
           nodulans ORS 2060]
          Length = 818

 Score =  105 bits (261), Expect = 7e-20,   Method: Compositional matrix adjust.
 Identities = 98/447 (21%), Positives = 195/447 (43%), Gaps = 21/447 (4%)

Query: 98  ALARLLRATVYIFTSQSTKAIEDLTQLVEDTSVDPKIKVNAHIKRAVVHLHAASDFTKAF 157
           A+A   R   +    +  +AI D  Q +    +DPK   N +I R +   +   ++ +A 
Sbjct: 94  AVAYTHRGLAFYRKGEYDRAIADYDQALR---LDPKY-ANIYINRGLA-FYRKGEYDRAI 148

Query: 158 ADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQRHFVVHK 217
           AD D+A ++D   A  Y  RG  +   G+Y+ A+ + D+ +  NP +  A   R      
Sbjct: 149 ADYDQALRLDLRDAVVYTNRGDAFRSKGEYDRAIADYDQALRFNPKYPYAYRNRGDTFQS 208

Query: 218 MIVPGDRERVEQSLKEFRNFVDTHSNVVEACTLFAQVLVDQEDFDGAEEYFNRSIRVDPE 277
                 +   ++++ ++   +  +     A T        + ++D A   +++++R+DP+
Sbjct: 209 ------KGEYDRAIADYDQALRLNPEDAAAYTHRGLAFQSKSEYDRAIADYDQALRLDPK 262

Query: 278 NASLYVHRAMLMLQARGNVDEAIKLIEKAISIDKSCMFAYETLGTIEVQRGRLEEAVKCF 337
            A++Y++R     +++G  + AI   ++A+ +D   + AY   G     +G  + A+  +
Sbjct: 263 YANIYINRGY-AFRSKGEYNRAIADFDQALRLDPKSVIAYTGRGDAFRSKGENDRAIADY 321

Query: 338 NKALPLARDEAELSHIYSLRDAAIAQMKVCER----YNIKKKVSPRSQNITKNEKLAIKQ 393
           ++AL   R   + ++ Y  R  A       +R    Y    ++ P+S     N  LA  Q
Sbjct: 322 DQAL---RFNPKYAYAYRNRGDAFRNKGEYDRAIADYTQALRLDPQSATAYNNRGLAF-Q 377

Query: 394 LRENNDIIIRPADKGGKTVVMDKADYTQKMTSILNSNDYEIIPGDPTKTIEESEKYGNLE 453
            +   D  I   D+  +    D A YT +  +     +++    D  + +    K     
Sbjct: 378 DKGEYDRAIADYDQALRLDPKDAAAYTNRGAAFYRKGEHDRAIADYEEALRLDPKSAAAY 437

Query: 454 NESGQK-HAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIAL 512
           N  G   +   D+ +A ADLD+A ++ P   + +Y RG  +   G  + AL +L++ + L
Sbjct: 438 NGRGAALNKKGDYDRAIADLDQALRLKPGFTNPHYHRGMAFRHKGDLDRALADLNEAVRL 497

Query: 513 NPNFHVARAQRHFVWTSTLAELMAFSD 539
           NP +  A  +R   + +      A +D
Sbjct: 498 NPKYADAYQERGVTFQARGESDRALAD 524



 Score = 87.4 bits (215), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 83/377 (22%), Positives = 166/377 (44%), Gaps = 32/377 (8%)

Query: 151 SDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQ 210
            ++ +A AD D+A ++DP  A +Y  RG  +   G+Y+ A+ + D+ + L+P   VA   
Sbjct: 40  GEYDRAIADYDQALRLDPKSAVAYTHRGLAFYRKGEYDRAIADYDQALRLDPKSAVAYTH 99

Query: 211 RHFVVHKMIVPGDRERVEQSLKEFRNFVDTHSNVVEACTLFAQVLVDQEDFDGAEEYFNR 270
           R    ++    G+ +R      +       ++N+     L       + ++D A   +++
Sbjct: 100 RGLAFYRK---GEYDRAIADYDQALRLDPKYANIYINRGL---AFYRKGEYDRAIADYDQ 153

Query: 271 SIRVDPENASLYVHRAMLMLQARGNVDEAIKLIEKAISIDKSCMFAYETLGTIEVQRGRL 330
           ++R+D  +A +Y +R     +++G  D AI   ++A+  +    +AY   G     +G  
Sbjct: 154 ALRLDLRDAVVYTNRGD-AFRSKGEYDRAIADYDQALRFNPKYPYAYRNRGDTFQSKGEY 212

Query: 331 EEAVKCFNKALPLARDEAELSHIYSLRDAAIAQMKVCER----YNIKKKVSPRSQNITKN 386
           + A+  +++AL L     E +  Y+ R  A       +R    Y+   ++ P+  NI  N
Sbjct: 213 DRAIADYDQALRL---NPEDAAAYTHRGLAFQSKSEYDRAIADYDQALRLDPKYANIYIN 269

Query: 387 EKLAIKQLRENNDII--------IRPADKGGKTVVMDKADYTQKMTSILNSNDYEIIPGD 438
              A +   E N  I        + P     K+V+     YT +  +  +  + +    D
Sbjct: 270 RGYAFRSKGEYNRAIADFDQALRLDP-----KSVIA----YTGRGDAFRSKGENDRAIAD 320

Query: 439 PTKTIEESEKYGNLENESGQK-HAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFG 497
             + +  + KY       G       ++ +A AD  +A ++DP  A +Y  RG  +   G
Sbjct: 321 YDQALRFNPKYAYAYRNRGDAFRNKGEYDRAIADYTQALRLDPQSATAYNNRGLAFQDKG 380

Query: 498 QYEEALRNLDKTIALNP 514
           +Y+ A+ + D+ + L+P
Sbjct: 381 EYDRAIADYDQALRLDP 397



 Score = 81.3 bits (199), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 79/358 (22%), Positives = 154/358 (43%), Gaps = 50/358 (13%)

Query: 171 ADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQRHFVVHKMIVPGDRERV--- 227
           A  YY RG  +   G+Y+ A+ + D+ + L+P   VA   R    ++    G+ +R    
Sbjct: 26  ATDYYNRGDAFRSKGEYDRAIADYDQALRLDPKSAVAYTHRGLAFYRK---GEYDRAIAD 82

Query: 228 -EQSLKEFRNFVDTHSNVVEACTLFAQVLVDQEDFDGAEEYFNRSIRVDPENASLYVHRA 286
            +Q+L+     +D  S V  A T        + ++D A   +++++R+DP+ A++Y++R 
Sbjct: 83  YDQALR-----LDPKSAV--AYTHRGLAFYRKGEYDRAIADYDQALRLDPKYANIYINRG 135

Query: 287 MLMLQARGNVDEAIKLIEKAISIDKSCMFAYETLGTIEVQRGRLEEAVKCFNKALPLARD 346
           +   + +G  D AI   ++A+ +D      Y   G     +G  + A+  +++AL     
Sbjct: 136 LAFYR-KGEYDRAIADYDQALRLDLRDAVVYTNRGDAFRSKGEYDRAIADYDQAL----- 189

Query: 347 EAELSHIYSLRDAAIAQMKVCERYNIKKKVSPRSQNITKNEKLAIKQLRENNDIIIRPAD 406
                                 R+N K   + R++  T        Q +   D  I   D
Sbjct: 190 ----------------------RFNPKYPYAYRNRGDT-------FQSKGEYDRAIADYD 220

Query: 407 KGGKTVVMDKADYTQKMTSILNSNDYEIIPGDPTKTIEESEKYGNLENESGQK-HAASDF 465
           +  +    D A YT +  +  + ++Y+    D  + +    KY N+    G    +  ++
Sbjct: 221 QALRLNPEDAAAYTHRGLAFQSKSEYDRAIADYDQALRLDPKYANIYINRGYAFRSKGEY 280

Query: 466 TKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQR 523
            +A AD D+A ++DP    +Y  RG  +   G+ + A+ + D+ +  NP +  A   R
Sbjct: 281 NRAIADFDQALRLDPKSVIAYTGRGDAFRSKGENDRAIADYDQALRFNPKYAYAYRNR 338



 Score = 67.0 bits (162), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 57/271 (21%), Positives = 116/271 (42%), Gaps = 36/271 (13%)

Query: 260 DFDGAEEYFNRSIRVDPENASLYVHRAMLMLQARGNVDEAIKLIEKAISIDKSCMFAYET 319
           ++D A   +++++R+DP++A  Y HR +   + +G  D AI   ++A+ +D     AY  
Sbjct: 41  EYDRAIADYDQALRLDPKSAVAYTHRGLAFYR-KGEYDRAIADYDQALRLDPKSAVAYTH 99

Query: 320 LGTIEVQRGRLEEAVKCFNKALPLARDEAELSHIYSLRDAAIAQMKVCERYNIKKKVSPR 379
            G    ++G  + A+  +++AL                                 ++ P+
Sbjct: 100 RGLAFYRKGEYDRAIADYDQAL---------------------------------RLDPK 126

Query: 380 SQNITKNEKLAIKQLRENNDIIIRPADKGGKTVVMDKADYTQKMTSILNSNDYEIIPGDP 439
             NI  N  LA  +  E  D  I   D+  +  + D   YT +  +  +  +Y+    D 
Sbjct: 127 YANIYINRGLAFYRKGEY-DRAIADYDQALRLDLRDAVVYTNRGDAFRSKGEYDRAIADY 185

Query: 440 TKTIEESEKYGNLENESGQK-HAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQ 498
            + +  + KY       G    +  ++ +A AD D+A +++P  A +Y  RG  +    +
Sbjct: 186 DQALRFNPKYPYAYRNRGDTFQSKGEYDRAIADYDQALRLNPEDAAAYTHRGLAFQSKSE 245

Query: 499 YEEALRNLDKTIALNPNFHVARAQRHFVWTS 529
           Y+ A+ + D+ + L+P +      R + + S
Sbjct: 246 YDRAIADYDQALRLDPKYANIYINRGYAFRS 276



 Score = 47.4 bits (111), Expect = 0.019,   Method: Compositional matrix adjust.
 Identities = 29/87 (33%), Positives = 46/87 (52%), Gaps = 5/87 (5%)

Query: 116 KAIEDLTQLVEDTSVDPKIKVNAHIKRAVVHLHAASDFTKAFADLDEAEKVDPNVADSYY 175
           +AI DL Q +    + P    N H  R +   H   D  +A ADL+EA +++P  AD+Y 
Sbjct: 452 RAIADLDQALR---LKPGF-TNPHYHRGMAFRHK-GDLDRALADLNEAVRLNPKYADAYQ 506

Query: 176 QRGQIYCLFGQYEEALRNLDKTIALNP 202
           +RG  +   G+ + AL +L + + L P
Sbjct: 507 ERGVTFQARGESDRALADLAEAVRLKP 533


>gi|169863459|ref|XP_001838351.1| ADP/ATP carrier receptor [Coprinopsis cinerea okayama7#130]
 gi|116500644|gb|EAU83539.1| ADP/ATP carrier receptor [Coprinopsis cinerea okayama7#130]
          Length = 606

 Score =  104 bits (260), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 95/367 (25%), Positives = 170/367 (46%), Gaps = 30/367 (8%)

Query: 10  AKEEISKRSFFKPSKQFIKTYLKSFPNDPILQ-PDGLSNGVELTNGDTNESHELDLLSKA 68
           A E +++R    PS  F+  Y  +F   P L+ P+  S G        +++ +L L    
Sbjct: 249 AAEILAQREPRLPSYTFVSAYFAAFRPRPALELPENPSQG--------DQTLQLSL---- 296

Query: 69  KRAFEHEDYLTAIRHCTEEI-ESTSSNHTKALARLLRATVYIFTSQSTKAIEDLTQLVED 127
            +A E  DY  A+    E I +  S +  KA A  LR T          +  DL   +  
Sbjct: 297 -QALEAADYAHALSFVNEAIDQGISWDAGKAEAFNLRGTFKFLIGDIEGSKGDLQTAI-- 353

Query: 128 TSVDPKIKVNAHIKRAVVHLHAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQY 187
            ++ P     + +K A VH+   +   KAF   +EA K +PN  D YY RGQ+  +   +
Sbjct: 354 -NLYPS-STQSLVKIASVHMEQGNP-VKAFECFEEAIKHNPNDPDIYYHRGQVLFIMSDF 410

Query: 188 EEALRNLDKTIALNPNFHVARAQRHFVVHKMIVPGDRERVEQSLKEFRNFVDTHSNVVEA 247
           ++A  +  K+  L+  F  +  Q     +K    G+   +  S+ +FR  +       E 
Sbjct: 411 DKAAEDYTKSTELDDQFVFSHIQLAVAQYKA---GN---IANSMAQFRRTMKAFPQRSEP 464

Query: 248 CTLFAQVLVDQEDFDGAEEYFNRSIRVDP----ENASLYVHRAMLMLQARGNVDEAIKLI 303
              + ++L+DQ+ +  A E F+R+I ++      N    V++ + + Q + ++  A +  
Sbjct: 465 QNYYGELLLDQQRYQDAVEKFDRAIEIEKAKPRPNVLPLVNKGLALYQWKQDIAAAEECC 524

Query: 304 EKAISIDKSCMFAYETLGTIEVQRGRLEEAVKCFNKALPLARDEAELSHIYSLRDAAIAQ 363
            +A++ID  C  A  TL  + +Q+ ++E+A++ F K   LAR E EL +  + + A  AQ
Sbjct: 525 NEALTIDPDCDAAVATLAQLSLQQSKIEKAMEMFKKQTELARTEPELVNALTYQYATAAQ 584

Query: 364 MKVCERY 370
           ++  + Y
Sbjct: 585 LEFLKTY 591


>gi|291569283|dbj|BAI91555.1| TPR domain protein [Arthrospira platensis NIES-39]
          Length = 847

 Score =  104 bits (259), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 93/382 (24%), Positives = 168/382 (43%), Gaps = 20/382 (5%)

Query: 165 KVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQRHFVVHKMIVPGDR 224
           ++D N A  YY RG  +   G YE A+ + ++ I +NPN+ +A   R F   +      +
Sbjct: 417 EIDINDATVYYSRGLTHRRQGNYEAAIADYNRAIEINPNYALAYNNRGFAHRR------Q 470

Query: 225 ERVEQSLKEFRNFVDTHSNVVEACTLFAQVLVDQEDFDGAEEYFNRSIRVDPENASLYVH 284
              E ++ ++   ++ + N   A          Q +++ A   +NR+I ++P  A  Y  
Sbjct: 471 GNYEAAIADYNRAIEINPNYALAYNNRGFAHRRQGNYEAAIADYNRAIEINPNYALAYNG 530

Query: 285 RAMLMLQARGNVDEAIKLIEKAISIDKSCMFAYETLGTIEVQRGRLEEAVKCFNKAL--- 341
           R  L  + +GN + AI    +AI I+ +   AY   G    ++G  E A+  +N+A+   
Sbjct: 531 RG-LTHRRQGNYEAAIADYNRAIEINPNYALAYNNRGFAHRRQGNYEAAIADYNRAIEIN 589

Query: 342 ---PLARDEAELSHIYSLRDAAIAQMKVCERYNIKKKVSPRSQNITKNEKLAIKQLRENN 398
               LA +    +H    R     +  + + YN   +++P   N   N   A +  + N 
Sbjct: 590 PNYALAYNNRGFAH----RSQGNYKAAIAD-YNRAIEINPNYHNAYNNRGFAHRS-QGNY 643

Query: 399 DIIIRPADKGGKTVVMDKADYTQKMTSILNSNDYEIIPGDPTKTIEESEKYGNLENESGQ 458
           +  I   ++  +        Y  +  +  +  +Y+    D  + IE +  Y N  N  G 
Sbjct: 644 EAAIADYNRAIEINPNYHNAYNNRGFAHRSQGNYKAAIADYNRAIEINPNYHNAYNNRGF 703

Query: 459 KH-AASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFH 517
            H +  ++  A AD + A +++PN A +Y  RG  +   G YE A+ + ++ I +NPN+H
Sbjct: 704 AHRSQGNYEAAIADYNRAIEINPNYALAYNGRGLTHRRQGNYEAAIADYNRAIEINPNYH 763

Query: 518 VARAQRHFVWTSTLAELMAFSD 539
            A   R F   S      A +D
Sbjct: 764 NAYNNRGFAHRSQGNYEAAIAD 785



 Score = 94.0 bits (232), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 90/389 (23%), Positives = 174/389 (44%), Gaps = 17/389 (4%)

Query: 117 AIEDLTQLVEDTSVDPKIKVNAHIKRAVVHLHAASDFTKAFADLDEAEKVDPNVADSYYQ 176
           AI D  + +E   ++P   + A+  R   H     ++  A AD + A +++PN A +Y  
Sbjct: 442 AIADYNRAIE---INPNYAL-AYNNRGFAHRRQG-NYEAAIADYNRAIEINPNYALAYNN 496

Query: 177 RGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQRHFVVHKMIVPGDRERVEQSLKEFRN 236
           RG  +   G YE A+ + ++ I +NPN+ +A   R  + H+      +   E ++ ++  
Sbjct: 497 RGFAHRRQGNYEAAIADYNRAIEINPNYALAYNGRG-LTHRR-----QGNYEAAIADYNR 550

Query: 237 FVDTHSNVVEACTLFAQVLVDQEDFDGAEEYFNRSIRVDPENASLYVHRAMLMLQARGNV 296
            ++ + N   A          Q +++ A   +NR+I ++P  A  Y +R     +++GN 
Sbjct: 551 AIEINPNYALAYNNRGFAHRRQGNYEAAIADYNRAIEINPNYALAYNNRGFAH-RSQGNY 609

Query: 297 DEAIKLIEKAISIDKSCMFAYETLGTIEVQRGRLEEAVKCFNKALPLARD--EAELSHIY 354
             AI    +AI I+ +   AY   G     +G  E A+  +N+A+ +  +   A  +  +
Sbjct: 610 KAAIADYNRAIEINPNYHNAYNNRGFAHRSQGNYEAAIADYNRAIEINPNYHNAYNNRGF 669

Query: 355 SLRDAAIAQMKVCERYNIKKKVSPRSQNITKNEKLAIKQLRENNDIIIRPADKGGKTVVM 414
           + R     +  + + YN   +++P   N   N   A +  + N +  I   ++  +    
Sbjct: 670 AHRSQGNYKAAIAD-YNRAIEINPNYHNAYNNRGFAHRS-QGNYEAAIADYNRAIEINPN 727

Query: 415 DKADYTQKMTSILNSNDYEIIPGDPTKTIEESEKYGNLENESGQKH-AASDFTKAFADLD 473
               Y  +  +     +YE    D  + IE +  Y N  N  G  H +  ++  A AD +
Sbjct: 728 YALAYNGRGLTHRRQGNYEAAIADYNRAIEINPNYHNAYNNRGFAHRSQGNYEAAIADYN 787

Query: 474 EAEKVDPNVADSYYQRGQIYCLFGQYEEA 502
            A +++PN A +Y  RG  Y + G+ ++A
Sbjct: 788 RAIEINPNYALAYKNRGDAYKVLGEKQKA 816



 Score = 77.4 bits (189), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 70/280 (25%), Positives = 123/280 (43%), Gaps = 18/280 (6%)

Query: 65  LSKAKRAFEHE---DYLTAIRHCTEEIESTSSNHTKALARLLRATVYIFTSQSTKAIEDL 121
           L+   R   H    +Y  AI      IE    N   ALA   R   +        AI D 
Sbjct: 526 LAYNGRGLTHRRQGNYEAAIADYNRAIEI---NPNYALAYNNRGFAHRRQGNYEAAIADY 582

Query: 122 TQLVEDTSVDPKIKVNAHIKRAVVHLHAASDFTKAFADLDEAEKVDPNVADSYYQRGQIY 181
            + +E   ++P   + A+  R   H  +  ++  A AD + A +++PN  ++Y  RG  +
Sbjct: 583 NRAIE---INPNYAL-AYNNRGFAH-RSQGNYKAAIADYNRAIEINPNYHNAYNNRGFAH 637

Query: 182 CLFGQYEEALRNLDKTIALNPNFHVARAQRHFVVHKMIVPGDRERVEQSLKEFRNFVDTH 241
              G YE A+ + ++ I +NPN+H A   R F  H+      +   + ++ ++   ++ +
Sbjct: 638 RSQGNYEAAIADYNRAIEINPNYHNAYNNRGF-AHR-----SQGNYKAAIADYNRAIEIN 691

Query: 242 SNVVEACTLFAQVLVDQEDFDGAEEYFNRSIRVDPENASLYVHRAMLMLQARGNVDEAIK 301
            N   A          Q +++ A   +NR+I ++P  A  Y  R  L  + +GN + AI 
Sbjct: 692 PNYHNAYNNRGFAHRSQGNYEAAIADYNRAIEINPNYALAYNGRG-LTHRRQGNYEAAIA 750

Query: 302 LIEKAISIDKSCMFAYETLGTIEVQRGRLEEAVKCFNKAL 341
              +AI I+ +   AY   G     +G  E A+  +N+A+
Sbjct: 751 DYNRAIEINPNYHNAYNNRGFAHRSQGNYEAAIADYNRAI 790



 Score = 74.7 bits (182), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 70/286 (24%), Positives = 125/286 (43%), Gaps = 18/286 (6%)

Query: 65  LSKAKRAFEHE---DYLTAIRHCTEEIESTSSNHTKALARLLRATVYIFTSQSTKAIEDL 121
           L+   R F H    +Y  AI      IE    N   ALA   R   +        AI D 
Sbjct: 560 LAYNNRGFAHRRQGNYEAAIADYNRAIEI---NPNYALAYNNRGFAHRSQGNYKAAIADY 616

Query: 122 TQLVEDTSVDPKIKVNAHIKRAVVHLHAASDFTKAFADLDEAEKVDPNVADSYYQRGQIY 181
            + +E   ++P    NA+  R   H  +  ++  A AD + A +++PN  ++Y  RG  +
Sbjct: 617 NRAIE---INPNYH-NAYNNRGFAH-RSQGNYEAAIADYNRAIEINPNYHNAYNNRGFAH 671

Query: 182 CLFGQYEEALRNLDKTIALNPNFHVARAQRHFVVHKMIVPGDRERVEQSLKEFRNFVDTH 241
              G Y+ A+ + ++ I +NPN+H A   R F  H+      +   E ++ ++   ++ +
Sbjct: 672 RSQGNYKAAIADYNRAIEINPNYHNAYNNRGFA-HR-----SQGNYEAAIADYNRAIEIN 725

Query: 242 SNVVEACTLFAQVLVDQEDFDGAEEYFNRSIRVDPENASLYVHRAMLMLQARGNVDEAIK 301
            N   A          Q +++ A   +NR+I ++P   + Y +R     +++GN + AI 
Sbjct: 726 PNYALAYNGRGLTHRRQGNYEAAIADYNRAIEINPNYHNAYNNRGFAH-RSQGNYEAAIA 784

Query: 302 LIEKAISIDKSCMFAYETLGTIEVQRGRLEEAVKCFNKALPLARDE 347
              +AI I+ +   AY+  G      G  ++A   +  A  L R +
Sbjct: 785 DYNRAIEINPNYALAYKNRGDAYKVLGEKQKAGSDWQTAANLYRKQ 830



 Score = 72.8 bits (177), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 69/280 (24%), Positives = 123/280 (43%), Gaps = 16/280 (5%)

Query: 268 FNRSIRVDPENASLYVHRAMLMLQARGNVDEAIKLIEKAISIDKSCMFAYETLGTIEVQR 327
           +NR + +D  +A++Y  R  L  + +GN + AI    +AI I+ +   AY   G    ++
Sbjct: 412 YNRPLEIDINDATVYYSRG-LTHRRQGNYEAAIADYNRAIEINPNYALAYNNRGFAHRRQ 470

Query: 328 GRLEEAVKCFNKAL------PLARDEAELSHIYSLR-DAAIAQMKVCERYNIKKKVSPRS 380
           G  E A+  +N+A+       LA +    +H      +AAIA       YN   +++P  
Sbjct: 471 GNYEAAIADYNRAIEINPNYALAYNNRGFAHRRQGNYEAAIAD------YNRAIEINPNY 524

Query: 381 QNITKNEKLAIKQLRENNDIIIRPADKGGKTVVMDKADYTQKMTSILNSNDYEIIPGDPT 440
             +  N +    + + N +  I   ++  +        Y  +  +     +YE    D  
Sbjct: 525 A-LAYNGRGLTHRRQGNYEAAIADYNRAIEINPNYALAYNNRGFAHRRQGNYEAAIADYN 583

Query: 441 KTIEESEKYGNLENESGQKH-AASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQY 499
           + IE +  Y    N  G  H +  ++  A AD + A +++PN  ++Y  RG  +   G Y
Sbjct: 584 RAIEINPNYALAYNNRGFAHRSQGNYKAAIADYNRAIEINPNYHNAYNNRGFAHRSQGNY 643

Query: 500 EEALRNLDKTIALNPNFHVARAQRHFVWTSTLAELMAFSD 539
           E A+ + ++ I +NPN+H A   R F   S      A +D
Sbjct: 644 EAAIADYNRAIEINPNYHNAYNNRGFAHRSQGNYKAAIAD 683


>gi|449544765|gb|EMD35737.1| hypothetical protein CERSUDRAFT_115692 [Ceriporiopsis subvermispora
           B]
          Length = 609

 Score =  103 bits (258), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 96/381 (25%), Positives = 169/381 (44%), Gaps = 40/381 (10%)

Query: 7   AQHAKEEISKRSFFKPSKQFIKTYLKSFPNDPILQ-PDGLSNGVELTNGDTNESHELDLL 65
           ++ A++ ++ R    PS  F+  Y  +F   P+   PD      E T GD      L+ L
Sbjct: 237 SKKAEQILATREPRLPSYTFVSAYFGAFRTRPLPALPD------EPTEGDRTLIMSLEAL 290

Query: 66  SKAKRAFEHEDYLTAIRHCTEEIESTSSNHTKALARLLRATVYIFTSQSTKAIEDLTQLV 125
                A E+   LT +    E+    S +  KA A  LR T     ++   A ED    +
Sbjct: 291 G----AGEYSQALTLVNEALEQ--GISWDIGKAEALNLRGTFKFLMTEVHGAKEDF---L 341

Query: 126 EDTSVDPKIKVNAHIKRAVVHLHAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFG 185
              ++ P +     +K A V++    D  KAF   +EA K +P+  D YY RGQ+  +  
Sbjct: 342 SSIALHPSL-TQTWVKLASVYMEQG-DPKKAFESFEEAIKHNPDDPDIYYHRGQVLFIMN 399

Query: 186 QYEEALRNLDKTIALNPNFHVARAQRHFVVHKMIVPGDRERVEQSLKEFRNFVDTHSNVV 245
           ++ +A  N  K+ +L+  F  +  Q     +K    GD   + +S+  FR  +       
Sbjct: 400 EFTDAAENYTKSTSLDDQFVFSHIQLAVAQYKS---GD---LAKSMATFRRTLKAFPQRS 453

Query: 246 EACTLFAQVLVDQEDFDGAEEYFNRSIRVDPENASLY----------------VHRAMLM 289
           E    + ++L+DQ+ F  A E F+R+I ++      Y                V++ + +
Sbjct: 454 EPQNYYGELLLDQQRFQDAVEKFDRAIELERAKPPPYSQISSDRGPHINVLPLVNKGLAL 513

Query: 290 LQARGNVDEAIKLIEKAISIDKSCMFAYETLGTIEVQRGRLEEAVKCFNKALPLARDEAE 349
            Q + ++  A +  ++A+ ID  C  A  TL  + +Q+G+++ A++ F +   LAR E E
Sbjct: 514 YQWKQDIGAAERCCQEALRIDPECEAAVATLAQLSLQQGKIDVAMQMFERQSELARSEPE 573

Query: 350 LSHIYSLRDAAIAQMKVCERY 370
           L    + + A  AQ++    Y
Sbjct: 574 LVAALTYQYATAAQVEFTRNY 594



 Score = 39.3 bits (90), Expect = 5.1,   Method: Compositional matrix adjust.
 Identities = 19/54 (35%), Positives = 30/54 (55%)

Query: 463 SDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNF 516
            D  KAF   +EA K +P+  D YY RGQ+  +  ++ +A  N  K+ +L+  F
Sbjct: 365 GDPKKAFESFEEAIKHNPDDPDIYYHRGQVLFIMNEFTDAAENYTKSTSLDDQF 418


>gi|170738881|ref|YP_001767536.1| peptidase C14 caspase catalytic subunit p20 [Methylobacterium sp.
           4-46]
 gi|168193155|gb|ACA15102.1| peptidase C14 caspase catalytic subunit p20 [Methylobacterium sp.
           4-46]
          Length = 1056

 Score =  103 bits (257), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 104/469 (22%), Positives = 204/469 (43%), Gaps = 29/469 (6%)

Query: 84  CTEEIESTSSNHTKAL--------ARLLRATVYIFTSQSTKAIEDLTQLVEDTSVDPKIK 135
             EE +   +++ +AL        A L R   +    +  +AI D  Q+++   +DP+  
Sbjct: 140 SKEEYDRAIADYNQALRLDPKYLSAALNRGDAFRSKGEYDRAIADYNQVLQ---IDPR-S 195

Query: 136 VNAHIKRAVVHLHAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLD 195
           V ++  R +       ++ +A AD ++A  +DP    +   RG ++ + GQY+ A+ N +
Sbjct: 196 VVSYNNRGLA-FQGKGEYDRAVADYNQALTLDPGYTIALINRGDVFRIKGQYDSAIENYN 254

Query: 196 KTIALNPNFHVARAQRHFVVHKMIVPGDRERVEQSLKEFRNFVDTHSNVVEACTLFAQVL 255
           + + LNP   +A   R FV +      ++   ++++ ++ + +      V A        
Sbjct: 255 QALQLNPKSKIAYNNRGFVFY------NKGEYDRAIADYNSALQIDPRYVVALVNRGDAF 308

Query: 256 VDQEDFDGAEEYFNRSIRVDPENASLYVHRAMLMLQARGNVDEAIKLIEKAISIDKSCMF 315
           V + D+D A   +  +++++P  A  Y  R +  LQ +G  D AI   ++A+ +D   +F
Sbjct: 309 VSKGDYDRAIGDYGHALQINPNYAFAYNGRGV-ALQNKGEYDRAIMDYDQALRLDPKYVF 367

Query: 316 AYETLGTIEVQRGRLEEAVKCFNKALPLARDEAELSHIYSLRDAAIAQM-KVCERYNIKK 374
           A+   G     +G  + A+  +N+AL L+ + A+  +   L     AQ  +  E Y    
Sbjct: 368 AFANRGDAFRSKGEHDVAIADYNQALRLSPNYAKAYNGRGLSFQNKAQYNRAIEDYEQVI 427

Query: 375 KVSPRSQNITKNEKLAIKQLRENNDIIIRPADKGGKTVVMDKAD---YTQKMTSILNSND 431
           ++ PR      N   A+    E   + I   D   K +++D      Y  +  +  +  +
Sbjct: 428 RLDPRFVAAYNNRGFALVSKGEPT-LAIADYD---KALLLDPKSATVYANRGRAFQDKGE 483

Query: 432 YEIIPGDPTKTIEESEKYG-NLENESGQKHAASDFTKAFADLDEAEKVDPNVADSYYQRG 490
           Y+    D  + +  + K    L N +       +  +A A  D+A +++P    +Y  RG
Sbjct: 484 YDRAIADYDQALRLNPKDAIALNNRADILRLRHEHDRAIASYDQALQLNPKYVGAYNSRG 543

Query: 491 QIYCLFGQYEEALRNLDKTIALNPNFHVARAQRHFVWTSTLAELMAFSD 539
             +   G+Y+ A+ N D+ + LNP +  A   R   +        A SD
Sbjct: 544 LAFQDKGEYDRAIANYDQALQLNPRYITAYINRGDAYRRKGEHARAISD 592



 Score = 85.1 bits (209), Expect = 9e-14,   Method: Compositional matrix adjust.
 Identities = 102/472 (21%), Positives = 197/472 (41%), Gaps = 63/472 (13%)

Query: 99  LARLLRATVYIFTSQSTKAIEDLTQLVEDTSVDPKIKVNAHIKRAVVHLHAASDFTKAFA 158
           +A + R  V+    Q   AIE+  Q ++   ++PK K+ A+  R  V  +   ++ +A A
Sbjct: 231 IALINRGDVFRIKGQYDSAIENYNQALQ---LNPKSKI-AYNNRGFV-FYNKGEYDRAIA 285

Query: 159 DLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQRHFVVHKM 218
           D + A ++DP    +   RG  +   G Y+ A+ +    + +NPN+  A   R   +   
Sbjct: 286 DYNSALQIDPRYVVALVNRGDAFVSKGDYDRAIGDYGHALQINPNYAFAYNGRGVALQN- 344

Query: 219 IVPGDRERV----EQSLKEFRNFVDTHSNVVEACTLFAQVLVDQEDFDGAEEYFNRSIRV 274
              G+ +R     +Q+L+    +V   +N  +A          + + D A   +N+++R+
Sbjct: 345 --KGEYDRAIMDYDQALRLDPKYVFAFANRGDA-------FRSKGEHDVAIADYNQALRL 395

Query: 275 DPENASLYVHRAMLMLQARGNVDEAIKLIEKAISIDKSCMFAYETLGTIEVQRGRLEEAV 334
            P  A  Y  R  L  Q +   + AI+  E+ I +D   + AY   G   V +G    A+
Sbjct: 396 SPNYAKAYNGRG-LSFQNKAQYNRAIEDYEQVIRLDPRFVAAYNNRGFALVSKGEPTLAI 454

Query: 335 KCFNKALPLARDEAELSHIYSLRDAAIAQMKVCER----YNIKKKVSPRSQNITKNEKLA 390
             ++KAL L   + + + +Y+ R  A       +R    Y+   +++P+   I  N +  
Sbjct: 455 ADYDKALLL---DPKSATVYANRGRAFQDKGEYDRAIADYDQALRLNPKDA-IALNNRAD 510

Query: 391 IKQLRENNDIIIRPADKGGKT-------------VVMDKADYTQKM-------------- 423
           I +LR  +D  I   D+  +                 DK +Y + +              
Sbjct: 511 ILRLRHEHDRAIASYDQALQLNPKYVGAYNSRGLAFQDKGEYDRAIANYDQALQLNPRYI 570

Query: 424 TSILNSNDYEIIPGDPTKTIEESEKYGNLE--------NESGQKHAASDFTKAFADLDEA 475
           T+ +N  D     G+  + I +  +   ++        N     H   ++ +A  D D A
Sbjct: 571 TAYINRGDAYRRKGEHARAISDYNQALQIDQNSVIAYNNRGLCFHEQGEYDRAIIDYDRA 630

Query: 476 EKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQRHFVW 527
            ++DP  +  +  RG  +   G+Y+ A+ + D+ + ++P    A   R F +
Sbjct: 631 LQIDPMYSTGFINRGFAFHKKGEYDRAIADYDRALQIDPRSATAYNNRGFTF 682



 Score = 83.6 bits (205), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 89/417 (21%), Positives = 173/417 (41%), Gaps = 22/417 (5%)

Query: 130 VDPKIKVNAHIKRAVVHLHAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEE 189
           ++PK+ V+A+I R         D+ +A AD D A ++DPN   ++  RG  +   G+Y+ 
Sbjct: 55  LNPKL-VSAYINRGFA-FRNKGDYDRAIADYDHALQIDPNSVVAFNNRGDAFYHKGEYDR 112

Query: 190 ALRNLDKTIALNPNFHVARAQRHFVVHKMIVPGDRERVEQSLKEFRNFVDTHSNVVEACT 249
           A+ + +++I L+ +       R            +E  ++++ ++   +      + A  
Sbjct: 113 AIADYNRSIKLSSDKAAVYNNRGLAFFS------KEEYDRAIADYNQALRLDPKYLSAAL 166

Query: 250 LFAQVLVDQEDFDGAEEYFNRSIRVDPENASLYVHRAMLMLQARGNVDEAIKLIEKAISI 309
                   + ++D A   +N+ +++DP +   Y +R  L  Q +G  D A+    +A+++
Sbjct: 167 NRGDAFRSKGEYDRAIADYNQVLQIDPRSVVSYNNRG-LAFQGKGEYDRAVADYNQALTL 225

Query: 310 DKSCMFAYETLGTIEVQRGRLEEAVKCFNKALPLARDEAELSHIYSLRDAAIAQMKVCER 369
           D     A    G +   +G+ + A++ +N+AL L     +    Y+ R          +R
Sbjct: 226 DPGYTIALINRGDVFRIKGQYDSAIENYNQALQL---NPKSKIAYNNRGFVFYNKGEYDR 282

Query: 370 ----YNIKKKVSPRSQNITKNEKLAIKQLRENNDIIIRPADKGGKTVVMDKA--DYTQKM 423
               YN   ++ PR      N   A     + +  I    D G    +       Y  + 
Sbjct: 283 AIADYNSALQIDPRYVVALVNRGDAFVSKGDYDRAI---GDYGHALQINPNYAFAYNGRG 339

Query: 424 TSILNSNDYEIIPGDPTKTIEESEKY-GNLENESGQKHAASDFTKAFADLDEAEKVDPNV 482
            ++ N  +Y+    D  + +    KY     N      +  +   A AD ++A ++ PN 
Sbjct: 340 VALQNKGEYDRAIMDYDQALRLDPKYVFAFANRGDAFRSKGEHDVAIADYNQALRLSPNY 399

Query: 483 ADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQRHFVWTSTLAELMAFSD 539
           A +Y  RG  +    QY  A+ + ++ I L+P F  A   R F   S     +A +D
Sbjct: 400 AKAYNGRGLSFQNKAQYNRAIEDYEQVIRLDPRFVAAYNNRGFALVSKGEPTLAIAD 456



 Score = 76.6 bits (187), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 78/378 (20%), Positives = 163/378 (43%), Gaps = 38/378 (10%)

Query: 155 KAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQRHFV 214
           KA A+ + A +++P +  +Y  RG  +   G Y+ A+ + D  + ++PN  VA   R   
Sbjct: 44  KAIAEFNLALRLNPKLVSAYINRGFAFRNKGDYDRAIADYDHALQIDPNSVVAFNNRGDA 103

Query: 215 VHKMIVPGDRERVEQSLKEFRNFVDTHSNVVEACTLFAQVLVDQEDFDGAEEYFNRSIRV 274
            +       +   ++++ ++   +   S+              +E++D A   +N+++R+
Sbjct: 104 FYH------KGEYDRAIADYNRSIKLSSDKAAVYNNRGLAFFSKEEYDRAIADYNQALRL 157

Query: 275 DPENASLYVHRAMLMLQARGNVDEAIKLIEKAISIDKSCMFAYETLGTIEVQRGRLEEAV 334
           DP+  S  ++R     +++G  D AI    + + ID   + +Y   G     +G  + AV
Sbjct: 158 DPKYLSAALNRGD-AFRSKGEYDRAIADYNQVLQIDPRSVVSYNNRGLAFQGKGEYDRAV 216

Query: 335 KCFNKALPLAR-------DEAELSHIYSLRDAAIAQMKVCERYNIKKKVSPRSQNITKNE 387
             +N+AL L         +  ++  I    D+AI      E YN   +++P+S+    N 
Sbjct: 217 ADYNQALTLDPGYTIALINRGDVFRIKGQYDSAI------ENYNQALQLNPKSKIAYNNR 270

Query: 388 KLAIKQLRE--------NNDIIIRPADKGGKTVVMDKADYTQKMTSILNSNDYEIIPGDP 439
                   E        N+ + I P     + VV        +  + ++  DY+   GD 
Sbjct: 271 GFVFYNKGEYDRAIADYNSALQIDP-----RYVVA----LVNRGDAFVSKGDYDRAIGDY 321

Query: 440 TKTIEESEKYGNLENESGQK-HAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQ 498
              ++ +  Y    N  G       ++ +A  D D+A ++DP    ++  RG  +   G+
Sbjct: 322 GHALQINPNYAFAYNGRGVALQNKGEYDRAIMDYDQALRLDPKYVFAFANRGDAFRSKGE 381

Query: 499 YEEALRNLDKTIALNPNF 516
           ++ A+ + ++ + L+PN+
Sbjct: 382 HDVAIADYNQALRLSPNY 399



 Score = 75.1 bits (183), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 97/421 (23%), Positives = 177/421 (42%), Gaps = 29/421 (6%)

Query: 116 KAIEDLTQLVEDTSVDPKIKVNAHIKRAVVHLHAASDFTKAFADLDEAEKVDPNVADSYY 175
           +AI D  Q +    +DPK  V A   R      +  +   A AD ++A ++ PN A +Y 
Sbjct: 350 RAIMDYDQALR---LDPKY-VFAFANRGDA-FRSKGEHDVAIADYNQALRLSPNYAKAYN 404

Query: 176 QRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQRHFVVHKMIVPGDRERVEQSLKEFR 235
            RG  +    QY  A+ + ++ I L+P F  A   R F +     P        ++ ++ 
Sbjct: 405 GRGLSFQNKAQYNRAIEDYEQVIRLDPRFVAAYNNRGFALVSKGEP------TLAIADYD 458

Query: 236 N--FVDTHSNVVEACTLFAQVLVDQEDFDGAEEYFNRSIRVDPENASLYVHRAMLMLQAR 293
               +D  S  V A     +   D+ ++D A   +++++R++P++A    +RA + L+ R
Sbjct: 459 KALLLDPKSATVYANR--GRAFQDKGEYDRAIADYDQALRLNPKDAIALNNRADI-LRLR 515

Query: 294 GNVDEAIKLIEKAISIDKSCMFAYETLGTIEVQRGRLEEAVKCFNKALPLARDEAELSHI 353
              D AI   ++A+ ++   + AY + G     +G  + A+  +++AL L          
Sbjct: 516 HEHDRAIASYDQALQLNPKYVGAYNSRGLAFQDKGEYDRAIANYDQALQL---NPRYITA 572

Query: 354 YSLRDAAIAQ----MKVCERYNIKKKVSPRSQNITKNEKLAIKQLRENNDIIIRPADKGG 409
           Y  R  A  +     +    YN   ++   S     N  L   +  E +  II   D+  
Sbjct: 573 YINRGDAYRRKGEHARAISDYNQALQIDQNSVIAYNNRGLCFHEQGEYDRAII-DYDRAL 631

Query: 410 KTVVMDKADYTQKMTSILNSNDYEIIPGDPTKTIEESEKYGNLENESG---QKHAASDFT 466
           +   M    +  +  +     +Y+    D  + ++   +     N  G   Q     D  
Sbjct: 632 QIDPMYSTGFINRGFAFHKKGEYDRAIADYDRALQIDPRSATAYNNRGFTFQNRGEYDL- 690

Query: 467 KAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQRHFV 526
            A  D D+A  + P++A+SYY RG +  L G  E ++ +L + I LNP +  A   R   
Sbjct: 691 -AIVDYDKAILIKPDLANSYYHRGTVLRLKGDLERSVADLTEAIRLNPRYAEAYQDRGLT 749

Query: 527 W 527
           +
Sbjct: 750 F 750



 Score = 74.7 bits (182), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 96/429 (22%), Positives = 182/429 (42%), Gaps = 55/429 (12%)

Query: 92  SSNHTKALARLLRATVYIFTSQSTKAIEDLTQLVEDTSVDPKIKVNAHIKRAVVHLHAAS 151
           S N+ KA     R   +   +Q  +AIED  Q++    +DP+  V A+  R    L +  
Sbjct: 396 SPNYAKAYNG--RGLSFQNKAQYNRAIEDYEQVIR---LDPRF-VAAYNNRGFA-LVSKG 448

Query: 152 DFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQR 211
           + T A AD D+A  +DP  A  Y  RG+ +   G+Y+ A+ + D+ + LNP   +A   R
Sbjct: 449 EPTLAIADYDKALLLDPKSATVYANRGRAFQDKGEYDRAIADYDQALRLNPKDAIALNNR 508

Query: 212 HFVVHKMIVPGDRERVEQSLKEFRNFVDTHSNVVEACTLFAQVLVDQEDFDGAEEYFNRS 271
             ++        R   ++++  +   +  +   V A         D+ ++D A   ++++
Sbjct: 509 ADILRL------RHEHDRAIASYDQALQLNPKYVGAYNSRGLAFQDKGEYDRAIANYDQA 562

Query: 272 IRVDPENASLYVHRAMLMLQARGNVDEAIKLIEKAISIDKSCMFAYETLGTIEVQRGRLE 331
           ++++P   + Y++R     + +G    AI    +A+ ID++ + AY   G    ++G  +
Sbjct: 563 LQLNPRYITAYINRGD-AYRRKGEHARAISDYNQALQIDQNSVIAYNNRGLCFHEQGEYD 621

Query: 332 EAVKCFNKALPLARDEAELSHIYSLRDAAIAQMKVCER----YNIKKKVSPRSQNITKNE 387
            A+  +++AL +   +   S  +  R  A  +    +R    Y+   ++ PRS     N 
Sbjct: 622 RAIIDYDRALQI---DPMYSTGFINRGFAFHKKGEYDRAIADYDRALQIDPRSATAYNNR 678

Query: 388 KLAIKQLRENNDIIIRPADKGGKTVVMDKADYTQKMTSILNSNDYEIIPGDPTKTIEESE 447
                Q R   D+ I   DK    +  D A+      ++L       + GD  +++    
Sbjct: 679 GFTF-QNRGEYDLAIVDYDKA-ILIKPDLANSYYHRGTVLR------LKGDLERSV---- 726

Query: 448 KYGNLENESGQKHAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLD 507
                                 ADL EA +++P  A++Y  RG  +   G+ + AL +  
Sbjct: 727 ----------------------ADLTEAIRLNPRYAEAYQDRGLTFHAKGEADRALADFA 764

Query: 508 KTIALNPNF 516
           +   L P F
Sbjct: 765 EAARLKPEF 773


>gi|220922903|ref|YP_002498205.1| peptidase C14 caspase catalytic subunit p20 [Methylobacterium
           nodulans ORS 2060]
 gi|219947510|gb|ACL57902.1| peptidase C14 caspase catalytic subunit p20 [Methylobacterium
           nodulans ORS 2060]
          Length = 784

 Score =  103 bits (256), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 98/447 (21%), Positives = 195/447 (43%), Gaps = 21/447 (4%)

Query: 98  ALARLLRATVYIFTSQSTKAIEDLTQLVEDTSVDPKIKVNAHIKRAVVHLHAASDFTKAF 157
           A+A   R   +    +  +AI D  Q +    +DPK   N +I R +   +   ++ +A 
Sbjct: 60  AVAYTHRGLAFYRKGEYDRAIADYDQALR---LDPKY-ANIYINRGLA-FYRKGEYDRAI 114

Query: 158 ADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQRHFVVHK 217
           AD D+A ++D   A  Y  RG  +   G+Y+ A+ + D+ +  NP +  A   R      
Sbjct: 115 ADYDQALRLDLRDAVVYTNRGDAFRSKGEYDRAIADYDQALRFNPKYAYAYRNRGDAFQS 174

Query: 218 MIVPGDRERVEQSLKEFRNFVDTHSNVVEACTLFAQVLVDQEDFDGAEEYFNRSIRVDPE 277
                 +   ++++ ++ + +  +     A T        + ++D A   +++++R DP+
Sbjct: 175 ------KGEYDRAIADYDHALRLNPEDAAAYTHRGLAFQSKSEYDRAIADYDQALRFDPK 228

Query: 278 NASLYVHRAMLMLQARGNVDEAIKLIEKAISIDKSCMFAYETLGTIEVQRGRLEEAVKCF 337
            A++Y++R     +++G  + AI   ++A+ +D   + AY   G     +G  + A+  +
Sbjct: 229 YANIYINRGY-AFRSKGEYNRAIADFDQALRLDPKSVIAYTGRGDAFRSKGENDRAIADY 287

Query: 338 NKALPLARDEAELSHIYSLRDAAIAQMKVCER----YNIKKKVSPRSQNITKNEKLAIKQ 393
           ++AL   R   + ++ Y  R  A       +R    Y+   ++ P+S     N  LA  Q
Sbjct: 288 DQAL---RFNPKYAYAYRNRGDAFRNKGEYDRAIADYDHALRLDPKSATAYNNRGLAF-Q 343

Query: 394 LRENNDIIIRPADKGGKTVVMDKADYTQKMTSILNSNDYEIIPGDPTKTIEESEKYGNLE 453
            +   D  I   D+  +    D A YT +  +     +++    D  + +    K     
Sbjct: 344 NKGEYDRAIADYDQALRLDPKDAAAYTNRGAAFYRKGEHDRAIADYDEALRLDPKSAAAY 403

Query: 454 NESGQK-HAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIAL 512
           N  G   +   ++ +A ADLD+A ++ P  A+ Y  RG  +   G  + AL  L++ + L
Sbjct: 404 NGRGAALNKKGEYDRAIADLDQALRLKPGFANPYCHRGTAFRHKGDLDRALAELNEAVRL 463

Query: 513 NPNFHVARAQRHFVWTSTLAELMAFSD 539
           NP +  A  +R   + +      A +D
Sbjct: 464 NPKYADAYQERGVTFQARGESDRALAD 490



 Score = 85.1 bits (209), Expect = 8e-14,   Method: Compositional matrix adjust.
 Identities = 93/417 (22%), Positives = 166/417 (39%), Gaps = 53/417 (12%)

Query: 151 SDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQ 210
            ++ +A AD D+A ++DP  A +Y  RG  +   G+Y+ A+ + D+ + L+P +      
Sbjct: 40  GEYDRAIADYDQALRLDPKSAVAYTHRGLAFYRKGEYDRAIADYDQALRLDPKYANIYIN 99

Query: 211 RHFVVHK---------------------MIVPGDRERVEQSLKEFRNFVDTHSNVVEACT 249
           R    ++                      +V  +R    +S  E+   +  +   +    
Sbjct: 100 RGLAFYRKGEYDRAIADYDQALRLDLRDAVVYTNRGDAFRSKGEYDRAIADYDQALRFNP 159

Query: 250 LFAQVLVDQED-FDGAEEY------FNRSIRVDPENASLYVHRAMLMLQARGNVDEAIKL 302
            +A    ++ D F    EY      ++ ++R++PE+A+ Y HR  L  Q++   D AI  
Sbjct: 160 KYAYAYRNRGDAFQSKGEYDRAIADYDHALRLNPEDAAAYTHRG-LAFQSKSEYDRAIAD 218

Query: 303 IEKAISIDKSCMFAYETLGTIEVQRGRLEEAVKCFNKALPL---------ARDEAELSHI 353
            ++A+  D      Y   G     +G    A+  F++AL L          R +A  S  
Sbjct: 219 YDQALRFDPKYANIYINRGYAFRSKGEYNRAIADFDQALRLDPKSVIAYTGRGDAFRSK- 277

Query: 354 YSLRDAAIAQMKVCERYNIKKKVSPRSQNITKNEKLAIKQLRENNDIIIRPADKGGKTVV 413
               D AIA      R+N K   + R++      K    +   + D  +R   K      
Sbjct: 278 -GENDRAIADYDQALRFNPKYAYAYRNRGDAFRNKGEYDRAIADYDHALRLDPKSATA-- 334

Query: 414 MDKADYTQKMTSILNSNDYEIIPGDPTKTIE-ESEKYGNLENESGQKHAASDFTKAFADL 472
                Y  +  +  N  +Y+    D  + +  + +      N     +   +  +A AD 
Sbjct: 335 -----YNNRGLAFQNKGEYDRAIADYDQALRLDPKDAAAYTNRGAAFYRKGEHDRAIADY 389

Query: 473 DEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNF-----HVARAQRH 524
           DEA ++DP  A +Y  RG      G+Y+ A+ +LD+ + L P F     H   A RH
Sbjct: 390 DEALRLDPKSAAAYNGRGAALNKKGEYDRAIADLDQALRLKPGFANPYCHRGTAFRH 446



 Score = 76.3 bits (186), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 78/357 (21%), Positives = 151/357 (42%), Gaps = 32/357 (8%)

Query: 171 ADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQRHFVVHKMIVPGDRERVEQS 230
           A  YY RG  +   G+Y+ A+ + D+ + L+P   VA   R    ++    G+ +R    
Sbjct: 26  ATDYYNRGDAFRSKGEYDRAIADYDQALRLDPKSAVAYTHRGLAFYRK---GEYDRAIAD 82

Query: 231 LKEFRNFVDTHSNVVEACTLFAQVLVDQEDFDGAEEYFNRSIRVDPENASLYVHRAMLML 290
             +       ++N+     L       + ++D A   +++++R+D  +A +Y +R     
Sbjct: 83  YDQALRLDPKYANIYINRGL---AFYRKGEYDRAIADYDQALRLDLRDAVVYTNRGD-AF 138

Query: 291 QARGNVDEAIKLIEKAISIDKSCMFAYETLGTIEVQRGRLEEAVKCFNKALPLARDEAEL 350
           +++G  D AI   ++A+  +    +AY   G     +G  + A+  ++ AL L     E 
Sbjct: 139 RSKGEYDRAIADYDQALRFNPKYAYAYRNRGDAFQSKGEYDRAIADYDHALRL---NPED 195

Query: 351 SHIYSLRDAAIAQMKVCER----YNIKKKVSPRSQNITKNEKLAIKQLRENNDII----- 401
           +  Y+ R  A       +R    Y+   +  P+  NI  N   A +   E N  I     
Sbjct: 196 AAAYTHRGLAFQSKSEYDRAIADYDQALRFDPKYANIYINRGYAFRSKGEYNRAIADFDQ 255

Query: 402 ---IRPADKGGKTVVMDKADYTQKMTSILNSNDYEIIPGDPTKTIEESEKYGNLENESGQ 458
              + P     K+V+     YT +  +  +  + +    D  + +  + KY       G 
Sbjct: 256 ALRLDP-----KSVIA----YTGRGDAFRSKGENDRAIADYDQALRFNPKYAYAYRNRGD 306

Query: 459 K-HAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNP 514
                 ++ +A AD D A ++DP  A +Y  RG  +   G+Y+ A+ + D+ + L+P
Sbjct: 307 AFRNKGEYDRAIADYDHALRLDPKSATAYNNRGLAFQNKGEYDRAIADYDQALRLDP 363



 Score = 57.4 bits (137), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 60/274 (21%), Positives = 114/274 (41%), Gaps = 42/274 (15%)

Query: 260 DFDGAEEYFNRSIRVDPENASLYVHRAMLMLQARGNVDEAIKLIEKAISIDKSCMFAYET 319
           ++D A   +++++R+DP++A  Y HR +   + +G  D AI   ++A+ +D      Y  
Sbjct: 41  EYDRAIADYDQALRLDPKSAVAYTHRGLAFYR-KGEYDRAIADYDQALRLDPKYANIYIN 99

Query: 320 LGTIEVQRGRLEEAVKCFNKALPLARDEAELSHIYSLRDAAIAQMKVCER----YNIKKK 375
            G    ++G  + A+  +++AL L   +A    +Y+ R  A       +R    Y+   +
Sbjct: 100 RGLAFYRKGEYDRAIADYDQALRLDLRDAV---VYTNRGDAFRSKGEYDRAIADYDQALR 156

Query: 376 VSPRSQNITKNEKLAIKQLRENNDIIIRPADKGGKTVVMDKADYTQKMTSILNSNDYEII 435
            +P+     +N   A  Q +   D  I   D   +    D A YT +  +  + ++Y+  
Sbjct: 157 FNPKYAYAYRNRGDAF-QSKGEYDRAIADYDHALRLNPEDAAAYTHRGLAFQSKSEYD-- 213

Query: 436 PGDPTKTIEESEKYGNLENESGQKHAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCL 495
                                          +A AD D+A + DP  A+ Y  RG  +  
Sbjct: 214 -------------------------------RAIADYDQALRFDPKYANIYINRGYAFRS 242

Query: 496 FGQYEEALRNLDKTIALNPNFHVARAQRHFVWTS 529
            G+Y  A+ + D+ + L+P   +A   R   + S
Sbjct: 243 KGEYNRAIADFDQALRLDPKSVIAYTGRGDAFRS 276



 Score = 50.1 bits (118), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 47/241 (19%), Positives = 95/241 (39%), Gaps = 35/241 (14%)

Query: 290 LQARGNVDEAIKLIEKAISIDKSCMFAYETLGTIEVQRGRLEEAVKCFNKALPLARDEAE 349
            +++G  D AI   ++A+ +D     AY   G    ++G  + A+  +++AL        
Sbjct: 36  FRSKGEYDRAIADYDQALRLDPKSAVAYTHRGLAFYRKGEYDRAIADYDQAL-------- 87

Query: 350 LSHIYSLRDAAIAQMKVCERYNIKKKVSPRSQNITKNEKLAIKQLRENNDIIIRPADKGG 409
                                    ++ P+  NI  N  LA  +  E  D  I   D+  
Sbjct: 88  -------------------------RLDPKYANIYINRGLAFYRKGEY-DRAIADYDQAL 121

Query: 410 KTVVMDKADYTQKMTSILNSNDYEIIPGDPTKTIEESEKYGNLENESGQK-HAASDFTKA 468
           +  + D   YT +  +  +  +Y+    D  + +  + KY       G    +  ++ +A
Sbjct: 122 RLDLRDAVVYTNRGDAFRSKGEYDRAIADYDQALRFNPKYAYAYRNRGDAFQSKGEYDRA 181

Query: 469 FADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQRHFVWT 528
            AD D A +++P  A +Y  RG  +    +Y+ A+ + D+ +  +P +      R + + 
Sbjct: 182 IADYDHALRLNPEDAAAYTHRGLAFQSKSEYDRAIADYDQALRFDPKYANIYINRGYAFR 241

Query: 529 S 529
           S
Sbjct: 242 S 242



 Score = 42.7 bits (99), Expect = 0.49,   Method: Compositional matrix adjust.
 Identities = 27/87 (31%), Positives = 45/87 (51%), Gaps = 5/87 (5%)

Query: 116 KAIEDLTQLVEDTSVDPKIKVNAHIKRAVVHLHAASDFTKAFADLDEAEKVDPNVADSYY 175
           +AI DL Q +    + P    N +  R     H   D  +A A+L+EA +++P  AD+Y 
Sbjct: 418 RAIADLDQALR---LKPGF-ANPYCHRGTAFRHK-GDLDRALAELNEAVRLNPKYADAYQ 472

Query: 176 QRGQIYCLFGQYEEALRNLDKTIALNP 202
           +RG  +   G+ + AL +L + + L P
Sbjct: 473 ERGVTFQARGESDRALADLAEAVRLKP 499


>gi|116197827|ref|XP_001224725.1| hypothetical protein CHGG_07069 [Chaetomium globosum CBS 148.51]
 gi|88178348|gb|EAQ85816.1| hypothetical protein CHGG_07069 [Chaetomium globosum CBS 148.51]
          Length = 594

 Score =  103 bits (256), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 72/258 (27%), Positives = 131/258 (50%), Gaps = 16/258 (6%)

Query: 138 AHIKRAVVHLHAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKT 197
           ++IKRA ++L   S   KA  D   A   +P   D YY R Q++ + G++ EA ++  K+
Sbjct: 345 SYIKRASMNLELGSP-EKAEEDFAAALSKNPEDPDIYYHRAQLHFIKGEFSEAQKDYQKS 403

Query: 198 IALNPNFHVARAQRHFVVHKMIVPGDRERVEQSLKEFRNFVDTHSNVVEACTLFAQVLVD 257
           I L+P+F  +  Q     +K         +  S+  FR  +       +    + ++L+D
Sbjct: 404 IDLDPDFIFSHIQLGVTQYKT------GSIASSMATFRRCMKNFEKTPDVYNYYGELLLD 457

Query: 258 QEDFDGAEEYFNRSIRVDPE------NASLYVHRAMLMLQARGNVDEAIKLIEKAISIDK 311
           Q+    A E F+ +I ++ E      N    +++++ + Q + +  EA KL EKA+ ID 
Sbjct: 458 QDKHHEAIEKFDMAIELERETKPTCMNVLPLINKSLAVFQWKQDFSEAEKLCEKALIIDP 517

Query: 312 SCMFAYETLGTIEVQRGRLEEAVKCFNKALPLARDEAELSHIYSLRDAAIAQMKVCERYN 371
            C  A  T+  + +Q+G++ EA+K F +A  LAR E EL +  S  +A   Q++V E+Y 
Sbjct: 518 ECDIAVATMAQLLLQQGKVTEALKYFERAAELARTEGELVNALSYAEATRTQIQVQEKY- 576

Query: 372 IKKKVSPRSQNITKNEKL 389
              K++ + Q + + + +
Sbjct: 577 --PKLASKLQGMGQGQAM 592


>gi|386000858|ref|YP_005919157.1| hypothetical protein Mhar_0143 [Methanosaeta harundinacea 6Ac]
 gi|357208914|gb|AET63534.1| TPR repeat-containing protein [Methanosaeta harundinacea 6Ac]
          Length = 609

 Score =  101 bits (251), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 93/381 (24%), Positives = 166/381 (43%), Gaps = 38/381 (9%)

Query: 151 SDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQ 210
            ++T A    DEA ++DP  AD++Y +G      G Y EA++  D+ I L+P +  A   
Sbjct: 3   GNYTMAIEAFDEAIRLDPEYADAWYSKGLTLYYRGNYTEAVQAYDEAIRLDPEYASAWNN 62

Query: 211 RHFVVHKMIVPGDRERVEQSLKEFRNFVDTHSNVVEACTLFAQVLVDQEDFDGAEEYFNR 270
           +   +        +   ++S+K +   +        A       L +Q ++  A   F+ 
Sbjct: 63  KGLALDY------QGNYDESIKAYDEAIRLDPEFAAAWNNKGIALGNQGNYTEATRCFDE 116

Query: 271 SIRVDPENASLYVHRAMLMLQARGNVDEAIKLIEKAISIDKSCMFAYETLGTIEVQRGRL 330
           +IR+DPE A  + ++    L  RGN   AI   ++AI +D     A+   G    +RG  
Sbjct: 117 AIRLDPEYAGAWYNKGK-ALSERGNYTGAILAYDEAIRLDPELAAAWHKKGDALFERGNY 175

Query: 331 EEAVKCFNKALPLARDEAELSHIYSLRDAAIAQMKVCE---RYNIKKKVSPRSQNITKNE 387
            EA++ F++A+ L  D  + +  Y+   A   Q    E    Y+   ++ P   +   N 
Sbjct: 176 TEAIQAFDEAIRL--DPEDATTWYNKGVALGMQGNYAEAIPAYDEAIRLDPEDADAWNNR 233

Query: 388 KLAIKQLRENNDII-------------IRPADKGGKTVVMDKADYTQKMTSILNSNDYEI 434
             A+ +L + ++ I               P +  GK + M K +YT+ + +       E 
Sbjct: 234 GNALNELGKYDEAIHALDKAIELDPEDAAPWNNKGKPLWM-KGNYTEAIQAFD-----EA 287

Query: 435 IPGDPTKTIEESEKYGNLENESGQKHAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYC 494
           I  DP   +  S K G +  + G+      + +A    DEA ++ PN  D++  +G    
Sbjct: 288 IRLDPELAVAWSNK-GTVLADQGK------YDEAIQAYDEAIRLHPNYVDAWINKGSALY 340

Query: 495 LFGQYEEALRNLDKTIALNPN 515
             G Y EA++  D+ I L+P+
Sbjct: 341 EQGNYPEAIQAYDEAIRLDPD 361



 Score = 91.7 bits (226), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 101/444 (22%), Positives = 195/444 (43%), Gaps = 65/444 (14%)

Query: 115 TKAIEDLTQLVEDTSVDPKIKVNAHIKRAVVHLHAASDFTKAFADLDEAEKVDPNVADSY 174
           T AIE   + +    +DP+   +A   + +  L+   ++T+A    DEA ++DP  A ++
Sbjct: 6   TMAIEAFDEAIR---LDPEY-ADAWYSKGLT-LYYRGNYTEAVQAYDEAIRLDPEYASAW 60

Query: 175 YQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQRHFVVHKMIVPGDRERVEQSLKEF 234
             +G      G Y+E+++  D+ I L+P F  A        +K I  G++    ++ + F
Sbjct: 61  NNKGLALDYQGNYDESIKAYDEAIRLDPEFAAA------WNNKGIALGNQGNYTEATRCF 114

Query: 235 RNFVDTHSNVVEACTLFAQVLVDQEDFDGAEEYFNRSIRVDPENASLYVHRAMLMLQARG 294
              +        A     + L ++ ++ GA   ++ +IR+DPE A+ + H+    L  RG
Sbjct: 115 DEAIRLDPEYAGAWYNKGKALSERGNYTGAILAYDEAIRLDPELAAAW-HKKGDALFERG 173

Query: 295 NVDEAIKLIEKAISIDKSCMFAYETLGTIEVQRGRLEEAVKCFNKALPLARDEAELSH-- 352
           N  EAI+  ++AI +D      +   G     +G   EA+  +++A+ L  ++A+  +  
Sbjct: 174 NYTEAIQAFDEAIRLDPEDATTWYNKGVALGMQGNYAEAIPAYDEAIRLDPEDADAWNNR 233

Query: 353 -------------IYSLRDAAIAQMKVCERYNIKKKVSPRSQNITKNEKLAIKQLRENND 399
                        I++L  A     +    +N K K      N T+  +   + +R + +
Sbjct: 234 GNALNELGKYDEAIHALDKAIELDPEDAAPWNNKGKPLWMKGNYTEAIQAFDEAIRLDPE 293

Query: 400 IIIRPADKGGKTVVMDKADYTQ---------------------KMTSILNSNDY------ 432
           + +  ++KG  TV+ D+  Y +                     K +++    +Y      
Sbjct: 294 LAVAWSNKG--TVLADQGKYDEAIQAYDEAIRLHPNYVDAWINKGSALYEQGNYPEAIQA 351

Query: 433 --EIIPGDPTKTIEESEKYGNLENESGQKHAASDFTKAFADLDEAEKVDPNVADSYYQRG 490
             E I  DP   +    K GN  +E G      ++T+     DEA ++DP  AD +  +G
Sbjct: 352 YDEAIRLDPDNAMTWYNK-GNALSELG------NYTEGILAYDEAIRLDPEEADVWVSKG 404

Query: 491 QIYCLFGQYEEALRNLDKTIALNP 514
             + + G+Y+EA++  D+ I L+P
Sbjct: 405 NSFRMQGKYDEAIQAYDEAIRLDP 428



 Score = 90.9 bits (224), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 100/454 (22%), Positives = 202/454 (44%), Gaps = 56/454 (12%)

Query: 67  KAKRAFEHEDYLTAIRHCTEEI----ESTSSNHTKALARLLRATVYIFTSQSTKAIEDLT 122
           K    FE  +Y  AI+   E I    E  ++ + K +A  ++       +++  A ++  
Sbjct: 165 KGDALFERGNYTEAIQAFDEAIRLDPEDATTWYNKGVALGMQGNY----AEAIPAYDEAI 220

Query: 123 QLVEDTSVDPKIKVNAHIKRAVVHLHAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYC 182
           +L      DP+   +A   R    L+    + +A   LD+A ++DP  A  +  +G+   
Sbjct: 221 RL------DPE-DADAWNNRGNA-LNELGKYDEAIHALDKAIELDPEDAAPWNNKGKPLW 272

Query: 183 LFGQYEEALRNLDKTIALNPNFHVARAQRHFVVHKMIVPGDRERVEQSLKEFRNFVDTHS 242
           + G Y EA++  D+ I L+P   VA + +  V+       D+ + +++++ +   +  H 
Sbjct: 273 MKGNYTEAIQAFDEAIRLDPELAVAWSNKGTVL------ADQGKYDEAIQAYDEAIRLHP 326

Query: 243 NVVEACTLFAQVLVDQEDFDGAEEYFNRSIRVDPENASLYVHRAMLMLQARGNVDEAIKL 302
           N V+A       L +Q ++  A + ++ +IR+DP+NA  + ++    L   GN  E I  
Sbjct: 327 NYVDAWINKGSALYEQGNYPEAIQAYDEAIRLDPDNAMTWYNKGN-ALSELGNYTEGILA 385

Query: 303 IEKAISIDKSCMFAYETLGTIEVQRGRLEEAVKCFNKALPLARDEAELSHIYSLRDAAIA 362
            ++AI +D      + + G     +G+ +EA++ +++A+ L  +EA++            
Sbjct: 386 YDEAIRLDPEEADVWVSKGNSFRMQGKYDEAIQAYDEAIRLDPEEADV------------ 433

Query: 363 QMKVCERYNIKKKVSPRSQNITKNEKLAIKQLRENNDIIIRPADKGGKTVVMDKADYTQK 422
            +     + ++ K     Q   +    AI+   E  D+ +    KG    +  K D    
Sbjct: 434 WVSKGNSFRMQGKYDEAIQAYDE----AIRLDPEEADVWVS---KGNSFRMQGKYD---- 482

Query: 423 MTSILNSNDYEIIPGDPTKTIEESEKYGNLENESGQKHAASDFTKAFADLDEAEKVDPNV 482
               + + D E I  DP       E  G   N+    +    + +A    DEA +++P+ 
Sbjct: 483 --EAIQAYD-EAIRLDP-------EFAGAWYNKGNALYEQDKYDEAIQAYDEAIRLNPDY 532

Query: 483 ADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNF 516
            +++  +G    + G+Y+EA++  D+ I L+P F
Sbjct: 533 KEAWNNKGNALVMQGKYDEAIQAYDEAIRLDPEF 566



 Score = 85.9 bits (211), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 106/463 (22%), Positives = 195/463 (42%), Gaps = 62/463 (13%)

Query: 64  LLSKAKRAFEHEDYLTAIRHCTEEI----ESTSSNHTKALARLLRATVYIFTSQSTKAIE 119
             +K K   E  +Y  AI    E I    E  ++ H K  A   R          T+AI+
Sbjct: 128 WYNKGKALSERGNYTGAILAYDEAIRLDPELAAAWHKKGDALFERGNY-------TEAIQ 180

Query: 120 DLTQLVEDTSVDPKIKVNAHIKRAVVHLHAASDFTKAFADLDEAEKVDPNVADSYYQRGQ 179
              + +    +DP+     + K   V L    ++ +A    DEA ++DP  AD++  RG 
Sbjct: 181 AFDEAIR---LDPEDATTWYNKG--VALGMQGNYAEAIPAYDEAIRLDPEDADAWNNRGN 235

Query: 180 IYCLFGQYEEALRNLDKTIALNPNFHVARAQRHFVVHKMIVPGDRERVEQSLKEFRNFVD 239
                G+Y+EA+  LDK I L+P        +      + + G+     ++++ F   + 
Sbjct: 236 ALNELGKYDEAIHALDKAIELDPEDAAPWNNKG---KPLWMKGN---YTEAIQAFDEAIR 289

Query: 240 THSNVVEACTLFAQVLVDQEDFDGAEEYFNRSIRVDPENASLYVHRAMLMLQARGNVDEA 299
               +  A +    VL DQ  +D A + ++ +IR+ P     ++++   + + +GN  EA
Sbjct: 290 LDPELAVAWSNKGTVLADQGKYDEAIQAYDEAIRLHPNYVDAWINKGSALYE-QGNYPEA 348

Query: 300 IKLIEKAISIDKSCMFAYETLGTIEVQRGRLEEAVKCFNKALPLARDEAELSHIYSLRDA 359
           I+  ++AI +D      +   G    + G   E +  +++A+ L  +EA++         
Sbjct: 349 IQAYDEAIRLDPDNAMTWYNKGNALSELGNYTEGILAYDEAIRLDPEEADV--------- 399

Query: 360 AIAQMKVCERYNIKKKVSPRSQNITKNEKLAIKQLRENNDIIIRPADKGGKTVVMDKADY 419
               +     + ++ K     Q   +    AI+   E  D+ +    KG    +  K D 
Sbjct: 400 ---WVSKGNSFRMQGKYDEAIQAYDE----AIRLDPEEADVWVS---KGNSFRMQGKYD- 448

Query: 420 TQKMTSILNSNDYEIIPGDPTKTIEESEKY---GNLENESGQKHAASDFTKAFADLDEAE 476
                  + + D E I  DP    EE++ +   GN     G+      + +A    DEA 
Sbjct: 449 -----EAIQAYD-EAIRLDP----EEADVWVSKGNSFRMQGK------YDEAIQAYDEAI 492

Query: 477 KVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVA 519
           ++DP  A ++Y +G       +Y+EA++  D+ I LNP++  A
Sbjct: 493 RLDPEFAGAWYNKGNALYEQDKYDEAIQAYDEAIRLNPDYKEA 535



 Score = 82.0 bits (201), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 108/478 (22%), Positives = 208/478 (43%), Gaps = 68/478 (14%)

Query: 64  LLSKAKRAFEHEDYLTAIRHCTEEI----ESTSSNHTKALARLLRATVYIFTSQSTKAIE 119
             SK    +   +Y  A++   E I    E  S+ + K LA   +        +S KA +
Sbjct: 26  WYSKGLTLYYRGNYTEAVQAYDEAIRLDPEYASAWNNKGLALDYQGNY----DESIKAYD 81

Query: 120 DLTQLVEDTSVDPKIKVNAHIKRAVVHLHAASDFTKAFADLDEAEKVDPNVADSYYQRGQ 179
           +  +L      DP+     + K   + L    ++T+A    DEA ++DP  A ++Y +G+
Sbjct: 82  EAIRL------DPEFAAAWNNKG--IALGNQGNYTEATRCFDEAIRLDPEYAGAWYNKGK 133

Query: 180 IYCLFGQYEEALRNLDKTIALNPNFHVARAQRHFVVHKMIVPGDRERVEQSLKEFRNFVD 239
                G Y  A+   D+ I L+P    A  ++   + +      R    ++++ F   + 
Sbjct: 134 ALSERGNYTGAILAYDEAIRLDPELAAAWHKKGDALFE------RGNYTEAIQAFDEAI- 186

Query: 240 THSNVVEACTLFAQ--VLVDQEDFDGAEEYFNRSIRVDPENASLYVHRAMLMLQARGNVD 297
              +  +A T + +   L  Q ++  A   ++ +IR+DPE+A  + +R    L   G  D
Sbjct: 187 -RLDPEDATTWYNKGVALGMQGNYAEAIPAYDEAIRLDPEDADAWNNRGN-ALNELGKYD 244

Query: 298 EAIKLIEKAISIDKSCMFAYETLGTIEVQRGRLEEAVKCFNKALPLARDEAELSHIYSLR 357
           EAI  ++KAI +D      +   G     +G   EA++ F++A+ L   + EL+  +S +
Sbjct: 245 EAIHALDKAIELDPEDAAPWNNKGKPLWMKGNYTEAIQAFDEAIRL---DPELAVAWSNK 301

Query: 358 DAAIAQM----KVCERYNIKKKVSPRSQNITKNEKLAIKQ--------------LRENND 399
              +A      +  + Y+   ++ P   +   N+  A+ +              +R + D
Sbjct: 302 GTVLADQGKYDEAIQAYDEAIRLHPNYVDAWINKGSALYEQGNYPEAIQAYDEAIRLDPD 361

Query: 400 IIIRPADKGGKTVVMDKADYTQKMTSILNSNDYEIIPGDPTKTIEESEKY---GNLENES 456
             +   +KG    + +  +YT+ + +       E I  DP    EE++ +   GN     
Sbjct: 362 NAMTWYNKG--NALSELGNYTEGILAYD-----EAIRLDP----EEADVWVSKGNSFRMQ 410

Query: 457 GQKHAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNP 514
           G+      + +A    DEA ++DP  AD +  +G  + + G+Y+EA++  D+ I L+P
Sbjct: 411 GK------YDEAIQAYDEAIRLDPEEADVWVSKGNSFRMQGKYDEAIQAYDEAIRLDP 462



 Score = 73.6 bits (179), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 71/279 (25%), Positives = 125/279 (44%), Gaps = 40/279 (14%)

Query: 268 FNRSIRVDPENASLYVHRAMLMLQARGNVDEAIKLIEKAISIDKSCMFAYETLGTIEVQR 327
           ++ +IR+DPE AS + ++  L L  +GN DE+IK  ++AI +D     A+   G     +
Sbjct: 46  YDEAIRLDPEYASAWNNKG-LALDYQGNYDESIKAYDEAIRLDPEFAAAWNNKGIALGNQ 104

Query: 328 GRLEEAVKCFNKALPLARDEAELSHIYSLRDAAIAQMKVCERYNIKKKVSPRSQNITKNE 387
           G   EA +CF++A+ L   + E +  +  +  A+      ER N    +    + I  + 
Sbjct: 105 GNYTEATRCFDEAIRL---DPEYAGAWYNKGKAL-----SERGNYTGAILAYDEAIRLDP 156

Query: 388 KLAIKQLRENNDIIIRPADKGGKT---------VVMDKAD----YTQKMTSILNSNDYEI 434
           +LA    ++ + +  R    G  T         + +D  D    Y + +   +  N  E 
Sbjct: 157 ELAAAWHKKGDALFER----GNYTEAIQAFDEAIRLDPEDATTWYNKGVALGMQGNYAEA 212

Query: 435 IPG-------DPTKTIEESEKYGNLENESGQKHAASDFTKAFADLDEAEKVDPNVADSYY 487
           IP        DP      + + GN  NE G+      + +A   LD+A ++DP  A  + 
Sbjct: 213 IPAYDEAIRLDPEDADAWNNR-GNALNELGK------YDEAIHALDKAIELDPEDAAPWN 265

Query: 488 QRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQRHFV 526
            +G+   + G Y EA++  D+ I L+P   VA + +  V
Sbjct: 266 NKGKPLWMKGNYTEAIQAFDEAIRLDPELAVAWSNKGTV 304



 Score = 60.8 bits (146), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 42/195 (21%), Positives = 95/195 (48%), Gaps = 13/195 (6%)

Query: 153 FTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNP---NFHVARA 209
           + +A    DEA ++DP  AD +  +G  + + G+Y+EA++  D+ I L+P   +  V++ 
Sbjct: 413 YDEAIQAYDEAIRLDPEEADVWVSKGNSFRMQGKYDEAIQAYDEAIRLDPEEADVWVSKG 472

Query: 210 QRHFVVHKMIVPGDRERVEQSLKEFRNFVDTHSNVVEACTLFAQVLVDQEDFDGAEEYFN 269
               +  K          +++++ +   +        A       L +Q+ +D A + ++
Sbjct: 473 NSFRMQGKY---------DEAIQAYDEAIRLDPEFAGAWYNKGNALYEQDKYDEAIQAYD 523

Query: 270 RSIRVDPENASLYVHRAMLMLQARGNVDEAIKLIEKAISIDKSCMFAYETLGTIEVQRGR 329
            +IR++P+    + ++   ++  +G  DEAI+  ++AI +D    + + + G +    G+
Sbjct: 524 EAIRLNPDYKEAWNNKGNALVM-QGKYDEAIQAYDEAIRLDPEFAYPWFSKGVVLEYLGK 582

Query: 330 LEEAVKCFNKALPLA 344
           + EA + + KA  L 
Sbjct: 583 VAEANEAYAKAEELG 597



 Score = 58.9 bits (141), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 40/161 (24%), Positives = 83/161 (51%), Gaps = 7/161 (4%)

Query: 153 FTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQRH 212
           + +A    DEA ++DP  AD +  +G  + + G+Y+EA++  D+ I L+P F  A   + 
Sbjct: 447 YDEAIQAYDEAIRLDPEEADVWVSKGNSFRMQGKYDEAIQAYDEAIRLDPEFAGAWYNKG 506

Query: 213 FVVHKMIVPGDRERVEQSLKEFRNFVDTHSNVVEACTLFAQVLVDQEDFDGAEEYFNRSI 272
             +++      +++ +++++ +   +  + +  EA       LV Q  +D A + ++ +I
Sbjct: 507 NALYE------QDKYDEAIQAYDEAIRLNPDYKEAWNNKGNALVMQGKYDEAIQAYDEAI 560

Query: 273 RVDPENASLYVHRAMLMLQARGNVDEAIKLIEKAISIDKSC 313
           R+DPE A  +  +  ++L+  G V EA +   KA  +  S 
Sbjct: 561 RLDPEFAYPWFSKG-VVLEYLGKVAEANEAYAKAEELGYST 600


>gi|326438126|gb|EGD83696.1| hypothetical protein PTSG_04301 [Salpingoeca sp. ATCC 50818]
          Length = 615

 Score =  101 bits (251), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 71/239 (29%), Positives = 119/239 (49%), Gaps = 18/239 (7%)

Query: 133 KIKVNAHIKRAVVHLHAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALR 192
           K   N  I+ A   L      ++A  D   A+++D    D Y+ + Q +   G    A  
Sbjct: 375 KRNANTLIRLAACRLELGRT-SEALTDFTTAQRLDDKNPDVYFHKAQAHISMGAAVMAFS 433

Query: 193 NLDKTIALN-----PNFHVARAQRHFVVHKMIVPGDRERVEQSLKEFRNFVDTHSNVVEA 247
           +L + I L      P  H+A         K  +    + +++++ +F      HS + E 
Sbjct: 434 DLQRAIKLGTKVYGPYVHLALLHLQTQDAKSAI----DLMQEAVTKFPEVSTVHSYLGE- 488

Query: 248 CTLFAQVLVDQEDFDGAEEYFNRSIRVDPENASLYVHRAMLMLQARGNVDEAIKLIEKAI 307
             +++ V     D D A E F+++I +DP NA+ YVH+ ++ +Q +GN+++ I+LI KAI
Sbjct: 489 --IYSAV----GDNDKAVECFDKAISLDPHNANPYVHKGLVFVQ-QGNMEQGIELIHKAI 541

Query: 308 SIDKSCMFAYETLGTIEVQRGRLEEAVKCFNKALPLARDEAELSHIYSLRDAAIAQMKV 366
            +D +C  AY  L  I VQR   EEA+KC++KA+       EL   +S ++A +AQ  V
Sbjct: 542 EVDDACESAYARLAQIHVQREEYEEALKCYDKAIAATHAGQELVAFFSCKEACVAQQAV 600


>gi|427421749|ref|ZP_18911932.1| TPR repeat-containing protein [Leptolyngbya sp. PCC 7375]
 gi|425757626|gb|EKU98480.1| TPR repeat-containing protein [Leptolyngbya sp. PCC 7375]
          Length = 1303

 Score =  101 bits (251), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 91/395 (23%), Positives = 178/395 (45%), Gaps = 21/395 (5%)

Query: 153  FTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQRH 212
            + +A A  D+A +V+P+   ++Y RG      G+Y+EA+ + D+ + +NP+ H+A   R 
Sbjct: 786  YEEAIASYDKAVEVNPDNHSAWYSRGNSLANLGRYQEAIASYDQAVEVNPDDHLAWYNRG 845

Query: 213  FVVHKMIVPGDRERVEQSLKEFRNFVDTHSNVVEACTLFAQVLVDQEDFDGAEEYFNRSI 272
              +  +         ++++  +   V+   +   +       L +   ++ A   +++++
Sbjct: 846  ISLASL------GHYQEAIASYDKAVELKPDDHNSWNNRGNSLANLGRYEEAIASYDQAV 899

Query: 273  RVDPENASLYVHRAMLMLQARGNVDEAIKLIEKAISIDKSCMFAYETLGTIEVQRGRLEE 332
             V+P+N S + +R    L + G+  EAI   +KA+ +      A+   G+     GR +E
Sbjct: 900  EVNPDNHSAWYNRGN-SLASLGHYQEAIASYDKAVELKPDNHLAWNNRGSSLHNLGRYQE 958

Query: 333  AVKCFNKALPLARDEAELSHI-YSLRDAAIAQM----KVCERYNIKKKVSPRSQNITKNE 387
            A+  +NKA+ L  D    +H+ ++ R +++  +    +    YN   ++ P       N+
Sbjct: 959  AITSYNKAVELKPD----NHLAWNNRGSSLHNLGRYQEAITSYNKAVELKPDKHEAWNNQ 1014

Query: 388  KLAIKQLRENNDIIIRPADKGGKTVVMDKADYTQKMTSILNSNDYEIIPGDPTKTIE-ES 446
              ++  L    + I    DK  +    D   +  +  S+ N   YE       K ++ + 
Sbjct: 1015 GSSLANLGRYEEAIAS-YDKAVELKPDDHLAWNNRGNSLKNLGRYEEAIASYDKAVDIKP 1073

Query: 447  EKYGNLENESGQKHAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNL 506
            + +  L N            +A ADL+ A  + P+ A +   RGQ Y    QYE AL +L
Sbjct: 1074 DDHKALANRGDIHRRLGQHQQALADLNHAIDLKPDYAWAIATRGQTYAQLQQYETALEDL 1133

Query: 507  DKTIALNPNFHVARAQRH--FVWTSTL-AELMAFS 538
            D+TI ++P+   A   R   ++W     A L AF+
Sbjct: 1134 DRTIEIDPDDTWAIGYRGELYLWLHRYQAALTAFN 1168



 Score = 84.0 bits (206), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 82/374 (21%), Positives = 166/374 (44%), Gaps = 16/374 (4%)

Query: 155  KAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQRHFV 214
            +A A  D A  ++PN  +S+  RG      G+YEEA+ + DK + +NPN H A   R   
Sbjct: 720  EAIASYDNAVNINPNDHNSWNNRGNSLVNLGRYEEAIASYDKAVEVNPNDHNAWNNRGNS 779

Query: 215  VHKMIVPGDRERVEQSLKEFRNFVDTHSNVVEACTLFAQVLVDQEDFDGAEEYFNRSIRV 274
            +  +       R E+++  +   V+ + +   A       L +   +  A   +++++ V
Sbjct: 780  LTNL------GRYEEAIASYDKAVEVNPDNHSAWYSRGNSLANLGRYQEAIASYDQAVEV 833

Query: 275  DPENASLYVHRAMLMLQARGNVDEAIKLIEKAISIDKSCMFAYETLGTIEVQRGRLEEAV 334
            +P++   + +R  + L + G+  EAI   +KA+ +      ++   G      GR EEA+
Sbjct: 834  NPDDHLAWYNRG-ISLASLGHYQEAIASYDKAVELKPDDHNSWNNRGNSLANLGRYEEAI 892

Query: 335  KCFNKALPLARDEAELSHIYSLRDAAIAQM----KVCERYNIKKKVSPRSQNITKNEKLA 390
              +++A+ +  D    S  Y+ R  ++A +    +    Y+   ++ P +     N   +
Sbjct: 893  ASYDQAVEVNPDNH--SAWYN-RGNSLASLGHYQEAIASYDKAVELKPDNHLAWNNRGSS 949

Query: 391  IKQLRENNDIIIRPADKGGKTVVMDKADYTQKMTSILNSNDYEIIPGDPTKTIE-ESEKY 449
            +  L    + I    +K  +    +   +  + +S+ N   Y+       K +E + +K+
Sbjct: 950  LHNLGRYQEAITS-YNKAVELKPDNHLAWNNRGSSLHNLGRYQEAITSYNKAVELKPDKH 1008

Query: 450  GNLENESGQKHAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKT 509
                N+         + +A A  D+A ++ P+   ++  RG      G+YEEA+ + DK 
Sbjct: 1009 EAWNNQGSSLANLGRYEEAIASYDKAVELKPDDHLAWNNRGNSLKNLGRYEEAIASYDKA 1068

Query: 510  IALNPNFHVARAQR 523
            + + P+ H A A R
Sbjct: 1069 VDIKPDDHKALANR 1082



 Score = 75.1 bits (183), Expect = 9e-11,   Method: Compositional matrix adjust.
 Identities = 81/429 (18%), Positives = 179/429 (41%), Gaps = 38/429 (8%)

Query: 128  TSVDPKIKVNAHIKRAVVHLHAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQY 187
            T   P   V+ ++ +  + LH    + +A A  D+A  ++P+  +++  +G       +Y
Sbjct: 625  TVSSPDFVVDLYLWKLGLSLHNLGHYVEAIASYDKALNINPDDHNAWIGKGTALEKLRKY 684

Query: 188  EEALRNLDKTIALNPNFHVARAQRHFVVHKM---------------IVPGDRE------- 225
            +EAL + +K + + P+  +    +   + ++               I P D         
Sbjct: 685  KEALISHNKALEIKPDDALGWYNKGVQLGQLGRDEEAIASYDNAVNINPNDHNSWNNRGN 744

Query: 226  ------RVEQSLKEFRNFVDTHSNVVEACTLFAQVLVDQEDFDGAEEYFNRSIRVDPENA 279
                  R E+++  +   V+ + N   A       L +   ++ A   +++++ V+P+N 
Sbjct: 745  SLVNLGRYEEAIASYDKAVEVNPNDHNAWNNRGNSLTNLGRYEEAIASYDKAVEVNPDNH 804

Query: 280  SLYVHRAMLMLQARGNVDEAIKLIEKAISIDKSCMFAYETLGTIEVQRGRLEEAVKCFNK 339
            S +  R    L   G   EAI   ++A+ ++     A+   G      G  +EA+  ++K
Sbjct: 805  SAWYSRGN-SLANLGRYQEAIASYDQAVEVNPDDHLAWYNRGISLASLGHYQEAIASYDK 863

Query: 340  ALPLARDEAELSHIYSLRDAAIAQMKVCER----YNIKKKVSPRSQNITKNEKLAIKQLR 395
            A+ L  D+    + ++ R  ++A +   E     Y+   +V+P + +   N   ++  L 
Sbjct: 864  AVELKPDD---HNSWNNRGNSLANLGRYEEAIASYDQAVEVNPDNHSAWYNRGNSLASLG 920

Query: 396  ENNDIIIRPADKGGKTVVMDKADYTQKMTSILNSNDYEIIPGDPTKTIE-ESEKYGNLEN 454
               + I    DK  +    +   +  + +S+ N   Y+       K +E + + +    N
Sbjct: 921  HYQEAIAS-YDKAVELKPDNHLAWNNRGSSLHNLGRYQEAITSYNKAVELKPDNHLAWNN 979

Query: 455  ESGQKHAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNP 514
                 H    + +A    ++A ++ P+  +++  +G      G+YEEA+ + DK + L P
Sbjct: 980  RGSSLHNLGRYQEAITSYNKAVELKPDKHEAWNNQGSSLANLGRYEEAIASYDKAVELKP 1039

Query: 515  NFHVARAQR 523
            + H+A   R
Sbjct: 1040 DDHLAWNNR 1048



 Score = 65.5 bits (158), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 90/428 (21%), Positives = 167/428 (39%), Gaps = 50/428 (11%)

Query: 77   YLTAIRHCTEEIESTSSNHTKALARLLRATVYIFTSQSTKAIEDLTQLVEDTSVDPKIKV 136
            Y  AI    + +E    NH+   A   R        +  +AI    Q VE   V+P   +
Sbjct: 786  YEEAIASYDKAVEVNPDNHS---AWYSRGNSLANLGRYQEAIASYDQAVE---VNPDDHL 839

Query: 137  NAHIKRAVVHLHAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDK 196
             A   R +  L +   + +A A  D+A ++ P+  +S+  RG      G+YEEA+ + D+
Sbjct: 840  -AWYNRGIS-LASLGHYQEAIASYDKAVELKPDDHNSWNNRGNSLANLGRYEEAIASYDQ 897

Query: 197  TIALNPNFHVARAQRHFVVHKMIVPGDRERVEQSLKEFRNFVDTHSNVVEACTLFAQVLV 256
             + +NP+ H A   R   +  +         ++++  +   V+   +   A       L 
Sbjct: 898  AVEVNPDNHSAWYNRGNSLASL------GHYQEAIASYDKAVELKPDNHLAWNNRGSSLH 951

Query: 257  DQEDFDGAEEYFNRSIRVDPENASLYVHRAMLMLQARGNVDEAIKLIEKAISIDKSCMFA 316
            +   +  A   +N+++ + P+N   + +R    L   G   EAI    KA+ +      A
Sbjct: 952  NLGRYQEAITSYNKAVELKPDNHLAWNNRGS-SLHNLGRYQEAITSYNKAVELKPDKHEA 1010

Query: 317  YETLGTIEVQRGRLEEAVKCFNKALPLARDEAELSHIYSLRDAAIAQMKVCERYNIKKKV 376
            +   G+     GR EEA+  ++KA+ L  D+                +    R N  K +
Sbjct: 1011 WNNQGSSLANLGRYEEAIASYDKAVELKPDD---------------HLAWNNRGNSLKNL 1055

Query: 377  SPRSQNITKNEKLAIKQLRENNDIIIRPADKGGKTVVMDKADYTQKMTSILNSNDYEIIP 436
                + I   +K           + I+P D      + ++ D  +++        ++   
Sbjct: 1056 GRYEEAIASYDKA----------VDIKPDD---HKALANRGDIHRRL------GQHQQAL 1096

Query: 437  GDPTKTIEESEKYGNLENESGQKHAA-SDFTKAFADLDEAEKVDPNVADSYYQRGQIYCL 495
             D    I+    Y       GQ +A    +  A  DLD   ++DP+   +   RG++Y  
Sbjct: 1097 ADLNHAIDLKPDYAWAIATRGQTYAQLQQYETALEDLDRTIEIDPDDTWAIGYRGELYLW 1156

Query: 496  FGQYEEAL 503
              +Y+ AL
Sbjct: 1157 LHRYQAAL 1164



 Score = 48.1 bits (113), Expect = 0.012,   Method: Compositional matrix adjust.
 Identities = 42/195 (21%), Positives = 83/195 (42%), Gaps = 7/195 (3%)

Query: 147  LHAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHV 206
            LH    + +A    ++A ++ P+  +++  +G      G+YEEA+ + DK + L P+ H+
Sbjct: 984  LHNLGRYQEAITSYNKAVELKPDKHEAWNNQGSSLANLGRYEEAIASYDKAVELKPDDHL 1043

Query: 207  ARAQRHFVVHKMIVPGDRERVEQSLKEFRNFVDTHSNVVEACTLFAQVLVDQEDFDGAEE 266
            A   R   +  +       R E+++  +   VD   +  +A      +         A  
Sbjct: 1044 AWNNRGNSLKNL------GRYEEAIASYDKAVDIKPDDHKALANRGDIHRRLGQHQQALA 1097

Query: 267  YFNRSIRVDPENASLYVHRAMLMLQARGNVDEAIKLIEKAISIDKSCMFAYETLGTIEVQ 326
              N +I + P+ A     R     Q +   + A++ +++ I ID    +A    G + + 
Sbjct: 1098 DLNHAIDLKPDYAWAIATRGQTYAQLQ-QYETALEDLDRTIEIDPDDTWAIGYRGELYLW 1156

Query: 327  RGRLEEAVKCFNKAL 341
              R + A+  FN AL
Sbjct: 1157 LHRYQAALTAFNHAL 1171


>gi|220925996|ref|YP_002501298.1| peptidase C14 caspase catalytic subunit p20 [Methylobacterium
           nodulans ORS 2060]
 gi|219950603|gb|ACL60995.1| peptidase C14 caspase catalytic subunit p20 [Methylobacterium
           nodulans ORS 2060]
          Length = 1056

 Score =  100 bits (250), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 91/431 (21%), Positives = 195/431 (45%), Gaps = 21/431 (4%)

Query: 104 RATVYIFTSQSTKAIEDLTQLVEDTSVDPKIKVNAHIKRAVVHLHAASDFTKAFADLDEA 163
           R    +      +AI DL Q +    +DPK   + +  R +       ++ +A AD D+A
Sbjct: 32  RGLASLHNGAYDRAIADLNQALR---LDPK-SASTYNDRGIA-FKFKGEYDRAIADYDQA 86

Query: 164 EKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQRHFVVHKMIVPGD 223
            ++DP  A  Y  RG  +   G+++ A+ + ++ + LNP + +A   R  V     + G+
Sbjct: 87  LRLDPKDAVFYNNRGNAFGAKGEHDRAIADFNQALTLNPRYSIAYKNRGDVFR---IKGE 143

Query: 224 RERVEQSLKEFRNFVDTHSNVVEACTLFAQVLVDQEDFDGAEEYFNRSIRVDPENASLYV 283
            +R   ++ ++   +        A          + ++D A   F++++R+DP++A +Y 
Sbjct: 144 HDR---AIADYDQALQLDPKYKLAYNNRGLSFQRKSEYDRAIADFDQALRLDPKDAVIYR 200

Query: 284 HRAMLMLQARGNVDEAIKLIEKAISIDKSCMFAYETLGTIEVQRGRLEEAVKCFNKALPL 343
           +R     +++G  D AI   ++A+ +D      +   G     +G    A+  +++AL L
Sbjct: 201 NRGD-AFRSKGEYDRAIANYDQALQLDSKYAAVHNNRGLAFYGKGEYGRALADYDQALQL 259

Query: 344 ARDEAELSHIYSLRDAAIAQMKVCER----YNIKKKVSPRSQNITKNEKLAIKQLRENND 399
              + + + +Y+ R          ER    Y+   ++ P+ + +  N +  I Q +   D
Sbjct: 260 ---DPKQAIVYTNRGDVFRIKGEHERAIADYDQALRLDPKYK-LAYNNRGLIFQNKSEYD 315

Query: 400 IIIRPADKGGKTVVMDKADYTQKMTSILNSNDYEIIPGDPTKTIEESEKYGNLENESGQK 459
             I   D+  +    D   Y  +  +  +  +Y+    +  + ++   KY  + N  G  
Sbjct: 316 QAIADFDQALRLDPKDAVIYRNRGDAFRSKGEYDRAIANYDQALQLDSKYAAVHNNRGLA 375

Query: 460 -HAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHV 518
            +   ++ +A AD D+A ++DP  A  Y  RG ++ + G++E A+ + D+ + L+P + +
Sbjct: 376 FYGKGEYGRALADYDQALQLDPKQAIVYTNRGDVFRIKGEHERAIADYDQALRLDPKYKL 435

Query: 519 ARAQRHFVWTS 529
           A   R  ++ +
Sbjct: 436 AYNNRGLIFQN 446



 Score = 95.1 bits (235), Expect = 8e-17,   Method: Compositional matrix adjust.
 Identities = 96/459 (20%), Positives = 201/459 (43%), Gaps = 43/459 (9%)

Query: 104 RATVYIFTSQSTKAIEDLTQLVEDTSVDPKIKVNAHIKRAVVHLHAASDFTKAFADLDEA 163
           R  V+    +  +AI D  Q ++   +DPK K+ A+  R +      S++ +A AD D+A
Sbjct: 134 RGDVFRIKGEHDRAIADYDQALQ---LDPKYKL-AYNNRGL-SFQRKSEYDRAIADFDQA 188

Query: 164 EKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQRHFVVH------- 216
            ++DP  A  Y  RG  +   G+Y+ A+ N D+ + L+  +      R    +       
Sbjct: 189 LRLDPKDAVIYRNRGDAFRSKGEYDRAIANYDQALQLDSKYAAVHNNRGLAFYGKGEYGR 248

Query: 217 --------------KMIVPGDRERV-------EQSLKEFRNFVDTHSNVVEACTLFAQVL 255
                         + IV  +R  V       E+++ ++   +        A      + 
Sbjct: 249 ALADYDQALQLDPKQAIVYTNRGDVFRIKGEHERAIADYDQALRLDPKYKLAYNNRGLIF 308

Query: 256 VDQEDFDGAEEYFNRSIRVDPENASLYVHRAMLMLQARGNVDEAIKLIEKAISIDKSCMF 315
            ++ ++D A   F++++R+DP++A +Y +R     +++G  D AI   ++A+ +D     
Sbjct: 309 QNKSEYDQAIADFDQALRLDPKDAVIYRNRGD-AFRSKGEYDRAIANYDQALQLDSKYAA 367

Query: 316 AYETLGTIEVQRGRLEEAVKCFNKALPLARDEAELSHIYSLRDAAIAQMKVCER----YN 371
            +   G     +G    A+  +++AL L   + + + +Y+ R          ER    Y+
Sbjct: 368 VHNNRGLAFYGKGEYGRALADYDQALQL---DPKQAIVYTNRGDVFRIKGEHERAIADYD 424

Query: 372 IKKKVSPRSQNITKNEKLAIKQLRENNDIIIRPADKGGKTVVMDKADYTQKMTSILNSND 431
              ++ P+ + +  N +  I Q +   D  I   D+  +    D   Y  +  +  +  +
Sbjct: 425 QALRLDPKYK-LAYNNRGLIFQNKSEYDQAIADFDQALRLDPKDAVIYRNRGDAFRSKGE 483

Query: 432 YEIIPGDPTKTIEESEKYGNLENESGQK-HAASDFTKAFADLDEAEKVDPNVADSYYQRG 490
           Y+    +  + ++   KY  + N  G   +   ++ +A AD D+A ++DP  A  Y  RG
Sbjct: 484 YDRAIANYDQALQLDPKYAAVHNNRGLAFYRKGEYGRALADYDQALQLDPKQAVVYTNRG 543

Query: 491 QIYCLFGQYEEALRNLDKTIALNPNFHVARAQRHFVWTS 529
            ++ + G+++ A+ + D+ + L+P +  A   R  V+ +
Sbjct: 544 DVFRIKGEHDRAIADYDQALRLDPKYIFAYNNRGLVFQN 582



 Score = 88.6 bits (218), Expect = 7e-15,   Method: Compositional matrix adjust.
 Identities = 101/465 (21%), Positives = 199/465 (42%), Gaps = 60/465 (12%)

Query: 104 RATVYIFTSQSTKAIEDLTQLVEDTSVDPKIKVNAHIKRAVVHLHAASDFTKAFADLDEA 163
           R  V+    +  +AI D  Q +    +DPK K+ A+  R ++     S++ +A AD D+A
Sbjct: 270 RGDVFRIKGEHERAIADYDQALR---LDPKYKL-AYNNRGLI-FQNKSEYDQAIADFDQA 324

Query: 164 EKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQRHFVVH------- 216
            ++DP  A  Y  RG  +   G+Y+ A+ N D+ + L+  +      R    +       
Sbjct: 325 LRLDPKDAVIYRNRGDAFRSKGEYDRAIANYDQALQLDSKYAAVHNNRGLAFYGKGEYGR 384

Query: 217 --------------KMIVPGDRERV-------EQSLKEFRNFVDTHSNVVEACTLFAQVL 255
                         + IV  +R  V       E+++ ++   +        A      + 
Sbjct: 385 ALADYDQALQLDPKQAIVYTNRGDVFRIKGEHERAIADYDQALRLDPKYKLAYNNRGLIF 444

Query: 256 VDQEDFDGAEEYFNRSIRVDPENASLYVHRAMLMLQARGNVDEAIKLIEKAISIDKSCMF 315
            ++ ++D A   F++++R+DP++A +Y +R     +++G  D AI   ++A+ +D     
Sbjct: 445 QNKSEYDQAIADFDQALRLDPKDAVIYRNRGD-AFRSKGEYDRAIANYDQALQLDPKYAA 503

Query: 316 AYETLGTIEVQRGRLEEAVKCFNKALPLARDEA-------ELSHIYSLRDAAIAQMKVCE 368
            +   G    ++G    A+  +++AL L   +A       ++  I    D AIA      
Sbjct: 504 VHNNRGLAFYRKGEYGRALADYDQALQLDPKQAVVYTNRGDVFRIKGEHDRAIAD----- 558

Query: 369 RYNIKKKVSPRSQNITKNEKLAIKQLRENNDIIIRPADKGGKTVVMDKA---DYTQKMTS 425
            Y+   ++ P+      N  L  +   E +  I+       +T+ +D      Y  +  +
Sbjct: 559 -YDQALRLDPKYIFAYNNRGLVFQNKGEYDRAIV----DYDQTLRLDPKYAIAYANRGDT 613

Query: 426 ILNSNDYEIIPGDPTKTIEESEKYGNLENESGQK-HAASDFTKAFADLDEAEKVDPNVAD 484
             +  +Y+    D  + ++ + KY    N  G   +   +  +A AD +EA ++DP  A 
Sbjct: 614 FQSKGEYDRAIADYDQALQHNPKYVIAYNGRGLAFYRKGEHDRAIADYEEALRLDPKSAA 673

Query: 485 SYYQRGQIYCLFGQYEEALRNLDKTIAL-----NPNFHVARAQRH 524
           ++  RG      G+Y+ A+ +LD+ + L     NP++H   A RH
Sbjct: 674 AFNNRGAALNKKGEYDRAITDLDQALRLKPGFANPHYHRGTAFRH 718



 Score = 85.1 bits (209), Expect = 8e-14,   Method: Compositional matrix adjust.
 Identities = 93/437 (21%), Positives = 179/437 (40%), Gaps = 81/437 (18%)

Query: 104 RATVYIFTSQSTKAIEDLTQLVEDTSVDPKIKVNAHIKRAVVHLHAASDFTKAFADLDEA 163
           R  V+    +  +AI D  Q +    +DPK K+ A+  R ++     S++ +A AD D+A
Sbjct: 406 RGDVFRIKGEHERAIADYDQALR---LDPKYKL-AYNNRGLI-FQNKSEYDQAIADFDQA 460

Query: 164 EKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQRHFVVHKMIVPGD 223
            ++DP  A  Y  RG  +   G+Y+ A+ N D+ + L+P +      R    ++      
Sbjct: 461 LRLDPKDAVIYRNRGDAFRSKGEYDRAIANYDQALQLDPKYAAVHNNRGLAFYRK----- 515

Query: 224 RERVEQSLKEFRNFVDTHSNVVEACTLFAQVLVDQEDFDGAEEYFNRSIRVDPENASLYV 283
                                      + + L D          +++++++DP+ A +Y 
Sbjct: 516 -------------------------GEYGRALAD----------YDQALQLDPKQAVVYT 540

Query: 284 HRAMLMLQARGNVDEAIKLIEKAISIDKSCMFAYETLGTIEVQRGRLEEAVKCFNKALPL 343
           +R   + + +G  D AI   ++A+ +D   +FAY   G +   +G  + A+  +++ L L
Sbjct: 541 NRGD-VFRIKGEHDRAIADYDQALRLDPKYIFAYNNRGLVFQNKGEYDRAIVDYDQTLRL 599

Query: 344 ARDEAELSHIYSLRDAAIAQMKVCERYNIKKKVSPRSQNITKNEKLAIKQLRENNDIIIR 403
              + + +  Y+ R          +R      ++   Q +  N K  I            
Sbjct: 600 ---DPKYAIAYANRGDTFQSKGEYDR-----AIADYDQALQHNPKYVI------------ 639

Query: 404 PADKGGKTVVMDKADYTQKMTSILNSNDYE-IIPGDPTKTIEESEKYGNLENESGQKHAA 462
            A  G       K ++ + +       DYE  +  DP K+       G   N+ G+    
Sbjct: 640 -AYNGRGLAFYRKGEHDRAIA------DYEEALRLDP-KSAAAFNNRGAALNKKGE---- 687

Query: 463 SDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQ 522
             + +A  DLD+A ++ P  A+ +Y RG  +   G  + AL +L++ + LNP +  A  +
Sbjct: 688 --YDRAITDLDQALRLKPGFANPHYHRGTAFRHKGDLDRALADLNEAVRLNPKYADAYQE 745

Query: 523 RHFVWTSTLAELMAFSD 539
           R   + +      A +D
Sbjct: 746 RGVTFQARGEPDRALAD 762



 Score = 83.2 bits (204), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 89/435 (20%), Positives = 184/435 (42%), Gaps = 62/435 (14%)

Query: 141 KRAVVH------LHAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNL 194
           K A VH       +   ++ +A AD D+A ++DP  A  Y  RG ++ + G++E A+ + 
Sbjct: 228 KYAAVHNNRGLAFYGKGEYGRALADYDQALQLDPKQAIVYTNRGDVFRIKGEHERAIADY 287

Query: 195 DKTIALNPNFHVARAQRHFVVHK---------------------MIVPGDRERVEQSLKE 233
           D+ + L+P + +A   R  +                         ++  +R    +S  E
Sbjct: 288 DQALRLDPKYKLAYNNRGLIFQNKSEYDQAIADFDQALRLDPKDAVIYRNRGDAFRSKGE 347

Query: 234 FRNFVDTHSNVVEACTLFAQVLVDQE-DFDGAEEY------FNRSIRVDPENASLYVHRA 286
           +   +  +   ++  + +A V  ++   F G  EY      +++++++DP+ A +Y +R 
Sbjct: 348 YDRAIANYDQALQLDSKYAAVHNNRGLAFYGKGEYGRALADYDQALQLDPKQAIVYTNRG 407

Query: 287 MLMLQARGNVDEAIKLIEKAISIDKSCMFAYETLGTIEVQRGRLEEAVKCFNKALPLARD 346
             + + +G  + AI   ++A+ +D     AY   G I   +   ++A+  F++AL L   
Sbjct: 408 D-VFRIKGEHERAIADYDQALRLDPKYKLAYNNRGLIFQNKSEYDQAIADFDQALRLDPK 466

Query: 347 EAELSHIYSLRDAAIAQMKVCER----YNIKKKVSPRSQNITKNEKLAIKQLRENNDIII 402
           +A    IY  R  A       +R    Y+   ++ P+   +  N  LA            
Sbjct: 467 DAV---IYRNRGDAFRSKGEYDRAIANYDQALQLDPKYAAVHNNRGLAF----------Y 513

Query: 403 RPADKGGKTVVMDKADYTQKMTSILNSNDYEI--IPGDPTKTIEESEKYGNLE------- 453
           R  + G      D+A       +++ +N  ++  I G+  + I + ++   L+       
Sbjct: 514 RKGEYGRALADYDQALQLDPKQAVVYTNRGDVFRIKGEHDRAIADYDQALRLDPKYIFAY 573

Query: 454 -NESGQKHAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIAL 512
            N         ++ +A  D D+  ++DP  A +Y  RG  +   G+Y+ A+ + D+ +  
Sbjct: 574 NNRGLVFQNKGEYDRAIVDYDQTLRLDPKYAIAYANRGDTFQSKGEYDRAIADYDQALQH 633

Query: 513 NPNFHVARAQRHFVW 527
           NP + +A   R   +
Sbjct: 634 NPKYVIAYNGRGLAF 648


>gi|330507774|ref|YP_004384202.1| TPR-repeat-containing protein [Methanosaeta concilii GP6]
 gi|328928582|gb|AEB68384.1| TPR-repeat protein [Methanosaeta concilii GP6]
          Length = 432

 Score =  100 bits (248), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 88/429 (20%), Positives = 188/429 (43%), Gaps = 53/429 (12%)

Query: 102 LLRATVYIFTSQSTKAIEDLTQLVEDTSVDPKIKVNAHIKRAVVHLHAASDFTKAFADLD 161
           L +   ++  S   +AI+   Q +   S+DP+       K     L A   + +A    D
Sbjct: 33  LEKGNAFVMLSMYDEAIQAYDQAI---SIDPQDAYAWSNKGEA--LRALGRYDEAIQAYD 87

Query: 162 EAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQRHFVVHKMIVP 221
           +A  +DP  A ++  +G+     G+Y+EA+   D+ I++NP    A   +   ++     
Sbjct: 88  QAISIDPQYAYAWSNKGEALRALGKYDEAINACDQAISINPQDAFAWTIKGNALY----- 142

Query: 222 GDRERVEQSLKEFRNFVDTHSNVVEACTLFAQVLVDQEDFDGAEEYFNRSIRVDPENASL 281
            D  + ++++  +   +        A +     L     +D A +  +++I +DP+NA  
Sbjct: 143 -DLGKYDEAINAYDQAISIDPQYAYAWSNKGTALGHLGKYDEAIKACDQAISIDPQNAYA 201

Query: 282 YVHRAMLMLQARGNVDEAIKLIEKAISIDKSCMFAYETLGTIEVQRGRLEEAVKCFNKAL 341
           + ++  + L   G  DEAIK  ++AISID     A+   GT   + G+ +EA+K  ++A+
Sbjct: 202 WYNKGTV-LGILGKYDEAIKPFDQAISIDPQFAEAWYNKGTALGRLGKYDEAIKACDQAI 260

Query: 342 PLARDEAELSHIYSLRDAAIAQM----KVCERYNIKKKVSPRSQNITKNEKLAIKQLREN 397
            +   + +L+  ++++  A+  +    +  + Y+    ++P+      N+ +A+  L + 
Sbjct: 261 SI---DPQLAETWTIKGIALYDLGKYDEAIQAYDQAISINPQIAEAWYNKGVALTALGKY 317

Query: 398 NDIIIRPADKGGKTVVMDKADYTQKMTSILNSNDYEIIPGDPTKTIEESEKYGNLENESG 457
           ++  I+  D+       D   +T K  ++ +   Y+                        
Sbjct: 318 DE-AIKACDQAISINPQDAFAWTIKGIALYDLGKYD------------------------ 352

Query: 458 QKHAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFH 517
                    +A    D+A +++P  A+++Y +G      G+Y+EA++  D+ I++NP F 
Sbjct: 353 ---------EAIQAYDQANRINPQFAEAWYNKGVALTALGKYDEAIKACDQAISINPQFA 403

Query: 518 VARAQRHFV 526
            A   +  V
Sbjct: 404 EAWYNKGVV 412



 Score = 92.0 bits (227), Expect = 8e-16,   Method: Compositional matrix adjust.
 Identities = 75/330 (22%), Positives = 154/330 (46%), Gaps = 24/330 (7%)

Query: 77  YLTAIRHCTEEIESTSSNHTKALARLLRATVYIFTSQSTKAIEDLTQLVEDTSVDPKIKV 136
           Y  AI  C + I   S N   A A  ++        +  +AI    Q +   S+DP+   
Sbjct: 113 YDEAINACDQAI---SINPQDAFAWTIKGNALYDLGKYDEAINAYDQAI---SIDPQYAY 166

Query: 137 NAHIK-RAVVHLHAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLD 195
               K  A+ HL     + +A    D+A  +DP  A ++Y +G +  + G+Y+EA++  D
Sbjct: 167 AWSNKGTALGHL---GKYDEAIKACDQAISIDPQNAYAWYNKGTVLGILGKYDEAIKPFD 223

Query: 196 KTIALNPNFHVARAQRHFVVHKMIVPGDRERVEQSLKEFRNFVDTHSNVVEACTLFAQVL 255
           + I+++P F  A   +   + ++       + ++++K     +     + E  T+    L
Sbjct: 224 QAISIDPQFAEAWYNKGTALGRL------GKYDEAIKACDQAISIDPQLAETWTIKGIAL 277

Query: 256 VDQEDFDGAEEYFNRSIRVDPENASLYVHRAMLMLQARGNVDEAIKLIEKAISIDKSCMF 315
            D   +D A + ++++I ++P+ A  + ++  + L A G  DEAIK  ++AISI+    F
Sbjct: 278 YDLGKYDEAIQAYDQAISINPQIAEAWYNKG-VALTALGKYDEAIKACDQAISINPQDAF 336

Query: 316 AYETLGTIEVQRGRLEEAVKCFNKALPLARDEAELSHIYSLRDAAIAQ----MKVCERYN 371
           A+   G      G+ +EA++ +++A  +    AE  +   +   A+ +    +K C++  
Sbjct: 337 AWTIKGIALYDLGKYDEAIQAYDQANRINPQFAEAWYNKGVALTALGKYDEAIKACDQ-- 394

Query: 372 IKKKVSPRSQNITKNEKLAIKQLRENNDII 401
               ++P+      N+ + +K L + ++ I
Sbjct: 395 -AISINPQFAEAWYNKGVVLKALGKYDEAI 423



 Score = 79.0 bits (193), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 63/261 (24%), Positives = 121/261 (46%), Gaps = 15/261 (5%)

Query: 77  YLTAIRHCTEEIESTSSNHTKALARLLRATVYIFTSQSTKAIEDLTQLVEDTSVDPKIKV 136
           Y  AI+ C + I     N   A A   + TV     +  +AI+   Q +   S+DP+   
Sbjct: 181 YDEAIKACDQAISIDPQN---AYAWYNKGTVLGILGKYDEAIKPFDQAI---SIDPQFAE 234

Query: 137 NAHIKRAVVHLHAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDK 196
             + K     L     + +A    D+A  +DP +A+++  +G      G+Y+EA++  D+
Sbjct: 235 AWYNKGTA--LGRLGKYDEAIKACDQAISIDPQLAETWTIKGIALYDLGKYDEAIQAYDQ 292

Query: 197 TIALNPNFHVARAQRHFVVHKMIVPGDRERVEQSLKEFRNFVDTHSNVVEACTLFAQVLV 256
            I++NP    A   +   +  +       + ++++K     +  +     A T+    L 
Sbjct: 293 AISINPQIAEAWYNKGVALTAL------GKYDEAIKACDQAISINPQDAFAWTIKGIALY 346

Query: 257 DQEDFDGAEEYFNRSIRVDPENASLYVHRAMLMLQARGNVDEAIKLIEKAISIDKSCMFA 316
           D   +D A + ++++ R++P+ A  + ++  + L A G  DEAIK  ++AISI+     A
Sbjct: 347 DLGKYDEAIQAYDQANRINPQFAEAWYNKG-VALTALGKYDEAIKACDQAISINPQFAEA 405

Query: 317 YETLGTIEVQRGRLEEAVKCF 337
           +   G +    G+ +EA+K F
Sbjct: 406 WYNKGVVLKALGKYDEAIKAF 426



 Score = 72.8 bits (177), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 73/363 (20%), Positives = 156/363 (42%), Gaps = 55/363 (15%)

Query: 170 VADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQRHFVVHKMIVPGDRERVEQ 229
            A  + ++G  + +   Y+EA++  D+ I+++P    A + +   +  +       R ++
Sbjct: 28  TAAEWLEKGNAFVMLSMYDEAIQAYDQAISIDPQDAYAWSNKGEALRAL------GRYDE 81

Query: 230 SLKEFRNFVDTHSNVVEACTLFAQVLVDQEDFDGAEEYFNRSIRVDPENASLYVHRAMLM 289
           +++ +   +        A +   + L     +D A    +++I ++P++A  +  +   +
Sbjct: 82  AIQAYDQAISIDPQYAYAWSNKGEALRALGKYDEAINACDQAISINPQDAFAWTIKGNAL 141

Query: 290 LQARGNVDEAIKLIEKAISIDKSCMFAYETLGTIEVQRGRLEEAVKCFNKALPLARDEAE 349
               G  DEAI   ++AISID    +A+   GT     G+ +EA+K  ++A+ +     +
Sbjct: 142 YD-LGKYDEAINAYDQAISIDPQYAYAWSNKGTALGHLGKYDEAIKACDQAISI-----D 195

Query: 350 LSHIYSLRDAAIAQMKVCERYNIKKKVSPRSQNITKNEKLAIKQLRENNDIIIRPADKGG 409
             + Y+  +     + +  +Y+  + + P  Q I+ + + A               +KG 
Sbjct: 196 PQNAYAWYNKGTV-LGILGKYD--EAIKPFDQAISIDPQFAEAWY-----------NKGT 241

Query: 410 KTVVMDKADYTQKMTSILNSNDYEIIPGDP----TKTIEESEKYGNLENESGQKHAASDF 465
               + K D   K          + I  DP    T TI+    Y     + G+      +
Sbjct: 242 ALGRLGKYDEAIKACD-------QAISIDPQLAETWTIKGIALY-----DLGK------Y 283

Query: 466 TKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQRHF 525
            +A    D+A  ++P +A+++Y +G      G+Y+EA++  D+ I++NP       Q  F
Sbjct: 284 DEAIQAYDQAISINPQIAEAWYNKGVALTALGKYDEAIKACDQAISINP-------QDAF 336

Query: 526 VWT 528
            WT
Sbjct: 337 AWT 339


>gi|322780862|gb|EFZ10091.1| hypothetical protein SINV_15424 [Solenopsis invicta]
          Length = 172

 Score = 99.8 bits (247), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 64/190 (33%), Positives = 97/190 (51%), Gaps = 28/190 (14%)

Query: 6   GAQHAKEEISKRSFFKPSKQFIKTYLKSFPNDPIL----QPDGLSNGVELTNGDTNESHE 61
           G QHA+E ++ + F  PSK FIKTY+ SFPNDP+      P+ +                
Sbjct: 1   GKQHAQENLANKDFIMPSKHFIKTYIISFPNDPVFTRLQHPENIP--------------- 45

Query: 62  LDLLSKAKRAFEHEDYLTAIRHCTEEIESTSSN---HTKALARLLRATVYIFTSQSTKAI 118
            +   K  +A +  +Y   I  CTE I+    N    ++    LLRAT Y+   + T A+
Sbjct: 46  -EFFKKPLQALKDTEYDDIIPLCTEIIKRPEFNMLPSSRIEVLLLRATFYLLLGKHTVAL 104

Query: 119 EDLTQLV--EDTSVDPKIKVNAHIKRAVVHLHAASDFTKAFADLDEAEKVDPNVADSYYQ 176
           ED   ++  EDTS D  +K+N+ IKRA +H+    D    F D + A K++P+ +D Y+ 
Sbjct: 105 EDFESILNSEDTSDD--VKINSLIKRAALHMQ-LEDTEMTFKDFELAIKMNPSYSDIYHH 161

Query: 177 RGQIYCLFGQ 186
           RGQ+  L  +
Sbjct: 162 RGQVLYLLNE 171


>gi|73670079|ref|YP_306094.1| TPR repeat-containing protein [Methanosarcina barkeri str. Fusaro]
 gi|72397241|gb|AAZ71514.1| TPR repeat [Methanosarcina barkeri str. Fusaro]
          Length = 927

 Score = 99.4 bits (246), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 93/415 (22%), Positives = 192/415 (46%), Gaps = 33/415 (7%)

Query: 113 QSTKAIEDLTQLVEDT-SVDPKIKVNAHIKRAVVHLHAASDFTKAFADLDEAEKVDPNVA 171
           +STKA ++  +  E+   +DP+  +  + K +   L    ++ +A    ++A ++ P   
Sbjct: 163 ESTKAYKESLEASENAIELDPRNSLAWYNKGSA--LQELGNYQEAITAYNKAIEIYPEYK 220

Query: 172 DSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQRHFVVHKMIVPGDRERVEQSL 231
           +++Y++G  +   G YEEA++  +KTI L+P      A +   + K+         E+++
Sbjct: 221 EAWYKKGLAFYNSGNYEEAVKACNKTIELDPQNPRVWANKGNALSKL------NSYEEAI 274

Query: 232 KEFRNFVDTHSNVVEACTLFAQVLVDQEDFDGAEEYFNRSIRVDPENASLYVHRAMLMLQ 291
             +   ++       A       +    +++ A +++N++I +DP+N+    ++   +  
Sbjct: 275 TAYNESIELDPQNSVAWNGLGFAVASSGNYEEAIKFYNKAIEIDPQNSEALSNKGFALYN 334

Query: 292 ARGNVDEAIKLIEKAISIDKSCMFAYETLGTIEVQRGRLEEAVKCFNKALPLARDEAELS 351
             GN +EAIK ++KAI ++     A+   G+I    G  EEAV+ F+KA  L   + + S
Sbjct: 335 V-GNREEAIKALDKAIEVNPQNAVAWYDKGSILKNLGNYEEAVEAFDKATEL---DPKKS 390

Query: 352 HIYSLRDAAIAQM----KVCERYNIKKKVSPRSQNITKNEKLAIKQLRENNDIIIRPADK 407
             ++ +  A++ +    +  + Y+   ++ P+      N+ +A+  L    +  I+  DK
Sbjct: 391 SAWNNKGNALSSLGNYDEAIKAYDKAIEIDPQDPGPWNNKGIALSNLGSYEE-SIKAFDK 449

Query: 408 GGKTVVMDKADYTQK--MTSILNSNDYEI------IPGDPTKTIEESEKYGNLENESGQK 459
             +  +     +  K  + SIL + +  I      I  DP  +I    K GN    SG+ 
Sbjct: 450 AIEINLSSSVTWANKGLVLSILGNYEGAIKAFDKSIEIDPRNSIAWVNK-GNALYNSGE- 507

Query: 460 HAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNP 514
                +       D+A ++DP   D++  +G+     G YEEA++  DK + + P
Sbjct: 508 -----YEGVITACDKAIELDPKNLDAWTNKGKALSSLGDYEEAIKAYDKALEIEP 557



 Score = 93.6 bits (231), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 99/452 (21%), Positives = 196/452 (43%), Gaps = 52/452 (11%)

Query: 116 KAIEDLTQLVEDTSVDPKIKVNAHIKRAVVHLHAASDFTKAFADLDEAEKVDPNVADSYY 175
           +AI+ L + +E   V+P+  V  + K ++  L    ++ +A    D+A ++DP  + ++ 
Sbjct: 340 EAIKALDKAIE---VNPQNAVAWYDKGSI--LKNLGNYEEAVEAFDKATELDPKKSSAWN 394

Query: 176 QRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQRHFVVHKMIVPGDRERVEQSLKEFR 235
            +G      G Y+EA++  DK I ++P             +K I   +    E+S+K F 
Sbjct: 395 NKGNALSSLGNYDEAIKAYDKAIEIDPQ------DPGPWNNKGIALSNLGSYEESIKAFD 448

Query: 236 NFVDTHSNVVEACTLFAQVLVDQ--EDFDGAEEYFNRSIRVDPENASLYVHRAMLMLQAR 293
             ++   N+  + T   + LV     +++GA + F++SI +DP N+  +V++   +  + 
Sbjct: 449 KAIEI--NLSSSVTWANKGLVLSILGNYEGAIKAFDKSIEIDPRNSIAWVNKGNALYNS- 505

Query: 294 GNVDEAIKLIEKAISIDKSCMFAYETLGTIEVQRGRLEEAVKCFNKAL------PLARDE 347
           G  +  I   +KAI +D   + A+   G      G  EEA+K ++KAL      PL  + 
Sbjct: 506 GEYEGVITACDKAIELDPKNLDAWTNKGKALSSLGDYEEAIKAYDKALEIEPQDPLTWNN 565

Query: 348 AELS--HIYSLRDAAIAQ-------------------MKVCERYNIKKKVSPRSQNITKN 386
            E++  H+ +  +A  A                    + +    N ++ V    + I  +
Sbjct: 566 REIAFGHLNNYEEALRAHNREIVSDSEDPEVSWNDKGLALYYSGNYEESVKAYDKAIELD 625

Query: 387 EKLAIKQLRENNDII--------IRPADKGGKTVVMDKADYTQKMTSILNSNDYEIIPGD 438
            + A     + N           I+  DK  +    +   +  K  ++ NS+ Y      
Sbjct: 626 PEYADAWFNKGNSFFSLKNYEEAIKAYDKAIELKPQNSLAWNNKGLALNNSSYYAEALKS 685

Query: 439 PTKTIE-ESEKYGNLENESGQKHAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFG 497
             K IE  S+      N+     +  D+  A    ++A +++P  +D++Y +G   C  G
Sbjct: 686 YDKAIELNSQDSAAWNNKGNTLSSLYDYEGALNAYNKAVEINPQYSDAWYNKGNTLCSLG 745

Query: 498 QYEEALRNLDKTIALNPNFHVARAQRHFVWTS 529
           +YEEA+   +KT+ ++P+   A   +    +S
Sbjct: 746 RYEEAVTAFNKTLEIDPHNSFAWCNKGIALSS 777



 Score = 77.8 bits (190), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 56/255 (21%), Positives = 117/255 (45%), Gaps = 34/255 (13%)

Query: 123 QLVEDTSVDPKIKVNAHIKRAVVHLHAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYC 182
           ++V D S DP++  N       + L+ + ++ ++    D+A ++DP  AD+++ +G  + 
Sbjct: 586 EIVSD-SEDPEVSWN----DKGLALYYSGNYEESVKAYDKAIELDPEYADAWFNKGNSFF 640

Query: 183 LFGQYEEALRNLDKTIALNPNFHVARAQRHFVVH-------------KMI--------VP 221
               YEEA++  DK I L P   +A   +   ++             K I          
Sbjct: 641 SLKNYEEAIKAYDKAIELKPQNSLAWNNKGLALNNSSYYAEALKSYDKAIELNSQDSAAW 700

Query: 222 GDRERVEQSLKEFRNFVDTHSNVVEACTLFAQVLVDQED-------FDGAEEYFNRSIRV 274
            ++     SL ++   ++ ++  VE    ++    ++ +       ++ A   FN+++ +
Sbjct: 701 NNKGNTLSSLYDYEGALNAYNKAVEINPQYSDAWYNKGNTLCSLGRYEEAVTAFNKTLEI 760

Query: 275 DPENASLYVHRAMLMLQARGNVDEAIKLIEKAISIDKSCMFAYETLGTIEVQRGRLEEAV 334
           DP N+  + ++  + L + GN +EA+K  +KA+ ID      +   G    + G+ EEAV
Sbjct: 761 DPHNSFAWCNKG-IALSSLGNYEEAMKSFDKALEIDSQNSLIWSNKGLALFEFGKYEEAV 819

Query: 335 KCFNKALPLARDEAE 349
           K +NK + + +   E
Sbjct: 820 KAYNKTIEIDQSNTE 834



 Score = 76.3 bits (186), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 87/407 (21%), Positives = 175/407 (42%), Gaps = 33/407 (8%)

Query: 130 VDPKIKVNAHIKRAVVHLHAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEE 189
           +DP+  + A + +    L+ + ++       D+A ++DP   D++  +G+     G YEE
Sbjct: 487 IDPRNSI-AWVNKGNA-LYNSGEYEGVITACDKAIELDPKNLDAWTNKGKALSSLGDYEE 544

Query: 190 ALRNLDKTIALNPNFHVARAQRHFVVHKMIVPGDRERVEQSLKEF-RNFVDTHSNVVEAC 248
           A++  DK + + P   +    R       I  G     E++L+   R  V    +   + 
Sbjct: 545 AIKAYDKALEIEPQDPLTWNNRE------IAFGHLNNYEEALRAHNREIVSDSEDPEVSW 598

Query: 249 TLFAQVLVDQEDFDGAEEYFNRSIRVDPENASLYVHRAMLMLQARGNVDEAIKLIEKAIS 308
                 L    +++ + + ++++I +DPE A  + ++       + N +EAIK  +KAI 
Sbjct: 599 NDKGLALYYSGNYEESVKAYDKAIELDPEYADAWFNKGNSFFSLK-NYEEAIKAYDKAIE 657

Query: 309 IDKSCMFAYETLGTIEVQRGRLEEAVKCFNKALPL-ARDEAE-------LSHIYSLRDAA 360
           +      A+   G          EA+K ++KA+ L ++D A        LS +Y    A 
Sbjct: 658 LKPQNSLAWNNKGLALNNSSYYAEALKSYDKAIELNSQDSAAWNNKGNTLSSLYDYEGAL 717

Query: 361 IAQMKVCERYNIKKKVSPRSQNITKNEKLAIKQLRENNDIIIRPADKGGKTVVMDKAD-- 418
            A  K  E       ++P+  +   N+   +  L    + +        KT+ +D  +  
Sbjct: 718 NAYNKAVE-------INPQYSDAWYNKGNTLCSLGRYEEAVTA----FNKTLEIDPHNSF 766

Query: 419 -YTQKMTSILNSNDYEIIPGDPTKTIE-ESEKYGNLENESGQKHAASDFTKAFADLDEAE 476
            +  K  ++ +  +YE       K +E +S+      N+         + +A    ++  
Sbjct: 767 AWCNKGIALSSLGNYEEAMKSFDKALEIDSQNSLIWSNKGLALFEFGKYEEAVKAYNKTI 826

Query: 477 KVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQR 523
           ++D +  +++  RG  + L G YEEA++N +KTI L+P + +A   R
Sbjct: 827 EIDQSNTETWNNRGSAFFLIGNYEEAMKNYNKTIELDPEYSLAWYNR 873



 Score = 75.9 bits (185), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 80/392 (20%), Positives = 166/392 (42%), Gaps = 23/392 (5%)

Query: 147 LHAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHV 206
           L  + ++ +A    D+A ++DP   +++  +G        YEEA++  +K I L+P   +
Sbjct: 87  LANSGNYKEAINAYDKAIELDPQNPEAWNNKGVALSNLSNYEEAIKAYNKAIELDPQNSL 146

Query: 207 ARAQRHFVVHKMIVPGDRERVEQSLKEFRNFVDTHSNVVE-------ACTLFAQVLVDQE 259
               +   ++++       + E+S K ++  ++   N +E       A       L +  
Sbjct: 147 FWYNKGKTLYEL------GKQEESTKAYKESLEASENAIELDPRNSLAWYNKGSALQELG 200

Query: 260 DFDGAEEYFNRSIRVDPENASLYVHRAMLMLQARGNVDEAIKLIEKAISIDKSCMFAYET 319
           ++  A   +N++I + PE    +  + +    + GN +EA+K   K I +D      +  
Sbjct: 201 NYQEAITAYNKAIEIYPEYKEAWYKKGLAFYNS-GNYEEAVKACNKTIELDPQNPRVWAN 259

Query: 320 LGTIEVQRGRLEEAVKCFNKALPLARDEAELSHIYSLRDAAIAQMKVCER----YNIKKK 375
            G    +    EEA+  +N+++ L   + + S  ++    A+A     E     YN   +
Sbjct: 260 KGNALSKLNSYEEAITAYNESIEL---DPQNSVAWNGLGFAVASSGNYEEAIKFYNKAIE 316

Query: 376 VSPRSQNITKNEKLAIKQLRENNDIIIRPADKGGKTVVMDKADYTQKMTSILNSNDYEII 435
           + P++     N+  A+  +  N +  I+  DK  +    +   +  K + + N  +YE  
Sbjct: 317 IDPQNSEALSNKGFALYNVG-NREEAIKALDKAIEVNPQNAVAWYDKGSILKNLGNYEEA 375

Query: 436 PGDPTKTIEESEKYGNLENESGQKHAA-SDFTKAFADLDEAEKVDPNVADSYYQRGQIYC 494
                K  E   K  +  N  G   ++  ++ +A    D+A ++DP     +  +G    
Sbjct: 376 VEAFDKATELDPKKSSAWNNKGNALSSLGNYDEAIKAYDKAIEIDPQDPGPWNNKGIALS 435

Query: 495 LFGQYEEALRNLDKTIALNPNFHVARAQRHFV 526
             G YEE+++  DK I +N +  V  A +  V
Sbjct: 436 NLGSYEESIKAFDKAIEINLSSSVTWANKGLV 467


>gi|428304133|ref|YP_007140958.1| hypothetical protein Cri9333_0484 [Crinalium epipsammum PCC 9333]
 gi|428245668|gb|AFZ11448.1| Tetratricopeptide TPR_1 repeat-containing protein [Crinalium
            epipsammum PCC 9333]
          Length = 1192

 Score = 99.0 bits (245), Expect = 6e-18,   Method: Compositional matrix adjust.
 Identities = 93/402 (23%), Positives = 179/402 (44%), Gaps = 37/402 (9%)

Query: 153  FTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQRH 212
            + +A A + +   + P  A  Y+ RG +Y    Q+++A+ + +  I +NP +  A   R 
Sbjct: 665  YPEAIATIQKGIDISPRAA-LYWIRGNVYVNQKQWDKAINDYNTAIKINPQYANAYLMRG 723

Query: 213  FVVHKMIVPGDRERVEQSLKEFRNFVDTHSNVVEACTLFAQVLVDQEDFDGAEEYFNRSI 272
             V        D+++ ++++ ++   +  +     A  +   V  DQ+ +D A + +N +I
Sbjct: 724  GVYS------DQKQWDKAIDDYNTAIKINPQYANAYLMRGDVYSDQKQWDKAIDDYNTAI 777

Query: 273  RVDPENASLYVHRAMLMLQARGNVDEAIKLIEKAISIDKSCMFAYETLGTIEVQRGRLEE 332
            +++  NA  Y  R ++  + +   ++AI     AI I+    FAY   G +  ++ + ++
Sbjct: 778  KINSNNAWAYSARGLVYYKQK-QWNKAIDDYNTAIKINPGDAFAYSARGLVYKEQKQWDK 836

Query: 333  AVKCFNKALPLARDEAELSHIYSLRDAAIAQMKVCER----YNIKKKVSPRSQN------ 382
            A+  +  A+ +     + +  YSLR     Q K  ++    +    K++P + N      
Sbjct: 837  AIDDYTTAIKI---NPQYADAYSLRGRVHDQQKQWDKAIDDFTTAIKINPNNANDYSLRG 893

Query: 383  -ITKNEKLAIKQLRE-NNDIIIRPADKGGKTV---VMDKADYTQKMTSILNSNDYEIIPG 437
             +  N+K   K + +    I I P D G  +V   V  +     K      S   +I PG
Sbjct: 894  LVYVNQKQWDKAIDDFTTAIKINPHDAGAYSVRGLVYQEQKQWDKAIDDFKS-AIKINPG 952

Query: 438  DPTKTIEESEKYGNLENESGQKHAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFG 497
            D +  +   E Y      S QK     + KA  D   A K++PN A +YY RG +Y    
Sbjct: 953  DASAYLSRGEVY------SYQKQ----WDKAIDDFKSAIKINPNDALAYYNRGNVYVNQK 1002

Query: 498  QYEEALRNLDKTIALNPNFHVARAQRHFVWTSTLAELMAFSD 539
            Q++ A+ + +  I +NP +  A   R  V+++     +A +D
Sbjct: 1003 QWDLAINDYNSAIKINPQYAEAYYNRGIVYSNQKKWELALAD 1044



 Score = 95.9 bits (237), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 92/401 (22%), Positives = 176/401 (43%), Gaps = 34/401 (8%)

Query: 153  FTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQRH 212
            + KA  D + A K++P  A++Y  RG +Y    Q+++A+ + +  I +NP +  A   R 
Sbjct: 698  WDKAINDYNTAIKINPQYANAYLMRGGVYSDQKQWDKAIDDYNTAIKINPQYANAYLMRG 757

Query: 213  FVVHKMIVPGDRERVEQSLKEFRNFVDTHSNVVEACTLFAQVLVDQEDFDGAEEYFNRSI 272
             V        D+++ ++++ ++   +  +SN   A +    V   Q+ ++ A + +N +I
Sbjct: 758  DVYS------DQKQWDKAIDDYNTAIKINSNNAWAYSARGLVYYKQKQWNKAIDDYNTAI 811

Query: 273  RVDPENASLYVHRAMLMLQARGNVDEAIKLIEKAISIDKSCMFAYETLGTIEVQRGRLEE 332
            +++P +A  Y  R  L+ + +   D+AI     AI I+     AY   G +  Q+ + ++
Sbjct: 812  KINPGDAFAYSARG-LVYKEQKQWDKAIDDYTTAIKINPQYADAYSLRGRVHDQQKQWDK 870

Query: 333  AVKCFNKALPLARDEAELSHIYSLRDAAIAQMKVCER----YNIKKKVSPRSQNITKNEK 388
            A+  F  A+ +  + A   + YSLR       K  ++    +    K++P          
Sbjct: 871  AIDDFTTAIKINPNNA---NDYSLRGLVYVNQKQWDKAIDDFTTAIKINPHDAGAYSVRG 927

Query: 389  LAIKQLRENNDII--------IRPADKGGKTVVMDKADYTQKMTSILN--SNDYEIIPGD 438
            L  ++ ++ +  I        I P D        +   Y ++    ++   +  +I P D
Sbjct: 928  LVYQEQKQWDKAIDDFKSAIKINPGDASAYLSRGEVYSYQKQWDKAIDDFKSAIKINPND 987

Query: 439  PTKTIEESEKYGNLENESGQKHAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQ 498
                      Y N      QK     +  A  D + A K++P  A++YY RG +Y    +
Sbjct: 988  ALAYYNRGNVYVN------QKQ----WDLAINDYNSAIKINPQYAEAYYNRGIVYSNQKK 1037

Query: 499  YEEALRNLDKTIALNPNFHVARAQRHFVWTSTLAELMAFSD 539
            +E AL + ++ I +NP F  A   R FV+ +      A SD
Sbjct: 1038 WELALADWNQAIKINPKFAEAYFNRGFVYHTQENYSAALSD 1078



 Score = 95.5 bits (236), Expect = 6e-17,   Method: Compositional matrix adjust.
 Identities = 103/459 (22%), Positives = 195/459 (42%), Gaps = 69/459 (15%)

Query: 97   KALARLLRATVYIFTSQSTKAIEDLTQLVEDTSVDPKIKVNAHIKRAVVHLHAASDFTKA 156
            +A    +R  VY+   Q  KAI D    ++   ++P+   NA++ R  V+      + KA
Sbjct: 681  RAALYWIRGNVYVNQKQWDKAINDYNTAIK---INPQY-ANAYLMRGGVY-SDQKQWDKA 735

Query: 157  FADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQRHFVVH 216
              D + A K++P  A++Y  RG +Y    Q+++A+ + +  I +N N   A + R  V +
Sbjct: 736  IDDYNTAIKINPQYANAYLMRGDVYSDQKQWDKAIDDYNTAIKINSNNAWAYSARGLVYY 795

Query: 217  KM---------------IVPGD------RERVEQSLKEFRNFVDTHSNVV-------EAC 248
            K                I PGD      R  V +  K++   +D ++  +       +A 
Sbjct: 796  KQKQWNKAIDDYNTAIKINPGDAFAYSARGLVYKEQKQWDKAIDDYTTAIKINPQYADAY 855

Query: 249  TLFAQVLVDQEDFDGAEEYFNRSIRVDPENASLYVHRAMLMLQARGNVDEAIKLIEKAIS 308
            +L  +V   Q+ +D A + F  +I+++P NA+ Y  R ++ +  +   D+AI     AI 
Sbjct: 856  SLRGRVHDQQKQWDKAIDDFTTAIKINPNNANDYSLRGLVYVNQK-QWDKAIDDFTTAIK 914

Query: 309  IDKSCMFAYETLGTIEVQRGRLEEAVKCFNKALPLARDEAELSHIYSLRDAAIAQMKVCE 368
            I+     AY   G +  ++ + ++A+  F  A+ +   +A             A +   E
Sbjct: 915  INPHDAGAYSVRGLVYQEQKQWDKAIDDFKSAIKINPGDAS------------AYLSRGE 962

Query: 369  RYNIKKKVSPRSQNITKNEKLAIKQLRENNDIIIRPADKGGKTVVMDKADYTQKMTSILN 428
             Y+ +K+      +     K AIK         I P          D   Y  +    +N
Sbjct: 963  VYSYQKQWDKAIDDF----KSAIK---------INP---------NDALAYYNRGNVYVN 1000

Query: 429  SNDYEIIPGDPTKTIEESEKYGNLENESGQKHA-ASDFTKAFADLDEAEKVDPNVADSYY 487
               +++   D    I+ + +Y       G  ++    +  A AD ++A K++P  A++Y+
Sbjct: 1001 QKQWDLAINDYNSAIKINPQYAEAYYNRGIVYSNQKKWELALADWNQAIKINPKFAEAYF 1060

Query: 488  QRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQRHFV 526
             RG +Y     Y  AL +  + +++N N   A +   F+
Sbjct: 1061 NRGFVYHTQENYSAALSDYKQALSINENLIAAISNIGFI 1099



 Score = 79.3 bits (194), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 55/218 (25%), Positives = 108/218 (49%), Gaps = 12/218 (5%)

Query: 94   NHTKALARLLRATVYIFTSQSTKAIEDLTQLVEDTSVDPKIKVNAHIKRAVVHLHAASDF 153
            N   A A L R  VY +  Q  KAI+D    ++   ++P   + A+  R  V+++    +
Sbjct: 950  NPGDASAYLSRGEVYSYQKQWDKAIDDFKSAIK---INPNDAL-AYYNRGNVYVNQ-KQW 1004

Query: 154  TKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQRHF 213
              A  D + A K++P  A++YY RG +Y    ++E AL + ++ I +NP F  A   R F
Sbjct: 1005 DLAINDYNSAIKINPQYAEAYYNRGIVYSNQKKWELALADWNQAIKINPKFAEAYFNRGF 1064

Query: 214  VVHKMIVPGDRERVEQSLKEFRNFVDTHSNVVEACTLFAQVLVDQEDFDGAEEYFNRSIR 273
            V H       +E    +L +++  +  + N++ A +    +  +  + + A + + + ++
Sbjct: 1065 VYHT------QENYSAALSDYKQALSINENLIAAISNIGFINYEMGETEAAIQQWQKVVK 1118

Query: 274  VDPENASLYVHRAMLMLQARGNVDEAIKLIEKAISIDK 311
            VD + A   +  A+ M   +G  D+ ++L  +A+ +DK
Sbjct: 1119 VDSQQAEPQLALAVAMY-TKGESDKGVQLAAQALKLDK 1155



 Score = 78.2 bits (191), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 69/274 (25%), Positives = 131/274 (47%), Gaps = 22/274 (8%)

Query: 75  EDYLTAIRHCTEEIESTSSNHTKALARLLRATVYIFTSQSTKAIEDLTQLVEDTSVDPKI 134
           +DY TAI+           N   A A L+R  VY    Q  KAI+D    ++  S +   
Sbjct: 737 DDYNTAIK----------INPQYANAYLMRGDVYSDQKQWDKAIDDYNTAIKINSNNAW- 785

Query: 135 KVNAHIKRAVVHLHAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNL 194
              A+  R +V+ +    + KA  D + A K++P  A +Y  RG +Y    Q+++A+ + 
Sbjct: 786 ---AYSARGLVY-YKQKQWNKAIDDYNTAIKINPGDAFAYSARGLVYKEQKQWDKAIDDY 841

Query: 195 DKTIALNPNFHVARAQRHFVVHKMIVPGDRERVEQSLKEFRNFVDTHSNVVEACTLFAQV 254
              I +NP +  A + R  V  +      +++ ++++ +F   +  + N     +L   V
Sbjct: 842 TTAIKINPQYADAYSLRGRVHDQ------QKQWDKAIDDFTTAIKINPNNANDYSLRGLV 895

Query: 255 LVDQEDFDGAEEYFNRSIRVDPENASLYVHRAMLMLQARGNVDEAIKLIEKAISIDKSCM 314
            V+Q+ +D A + F  +I+++P +A  Y  R  L+ Q +   D+AI   + AI I+    
Sbjct: 896 YVNQKQWDKAIDDFTTAIKINPHDAGAYSVRG-LVYQEQKQWDKAIDDFKSAIKINPGDA 954

Query: 315 FAYETLGTIEVQRGRLEEAVKCFNKALPLARDEA 348
            AY + G +   + + ++A+  F  A+ +  ++A
Sbjct: 955 SAYLSRGEVYSYQKQWDKAIDDFKSAIKINPNDA 988



 Score = 69.7 bits (169), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 86/397 (21%), Positives = 162/397 (40%), Gaps = 52/397 (13%)

Query: 171 ADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNF-HVARAQRHFVVHKMIVPGDRERVEQ 229
           A  + QRG       +Y+EA+   D  I L P F H+A   R  V++       +++  +
Sbjct: 546 ASVWLQRGNQLWRLRRYDEAIAAFDAAIKLQPAFVHLAWYGRGLVLYA------QKKYSE 599

Query: 230 SLKEFRNFVDTHSNVVEACTLFAQVLVDQEDFDGAEEYFNRSIRVDPENASLYVHRAMLM 289
           +       +    +   A  L +QVL   +  D A     ++I + P++ +LY  +  ++
Sbjct: 600 ASVAISTAISKKPDYYPALKLQSQVLTQLKQLDEALVAIEKAIVIQPQDPNLYFIKTSIL 659

Query: 290 LQARGNVDEAIKLIEKAISIDKSCMFAYETLGTIEVQRGRLEEAVKCFNKALPLARDEAE 349
              +    EAI  I+K I I       Y   G + V + + ++A+  +N A+ +     +
Sbjct: 660 SDLK-RYPEAIATIQKGIDISPRAAL-YWIRGNVYVNQKQWDKAINDYNTAIKI---NPQ 714

Query: 350 LSHIYSLRDAAIAQMKVCER----YNIKKKVSPRSQN-------ITKNEKLAIKQLRENN 398
            ++ Y +R    +  K  ++    YN   K++P+  N       +  ++K   K + + N
Sbjct: 715 YANAYLMRGGVYSDQKQWDKAIDDYNTAIKINPQYANAYLMRGDVYSDQKQWDKAIDDYN 774

Query: 399 DIIIRPADKGGKTVVMDKADYTQKMTSILNSNDY----EIIPGDP--------------- 439
             I   ++            Y QK  +    +DY    +I PGD                
Sbjct: 775 TAIKINSNNAWAYSARGLVYYKQKQWNKA-IDDYNTAIKINPGDAFAYSARGLVYKEQKQ 833

Query: 440 --------TKTIEESEKYGNLENESGQKH-AASDFTKAFADLDEAEKVDPNVADSYYQRG 490
                   T  I+ + +Y +  +  G+ H     + KA  D   A K++PN A+ Y  RG
Sbjct: 834 WDKAIDDYTTAIKINPQYADAYSLRGRVHDQQKQWDKAIDDFTTAIKINPNNANDYSLRG 893

Query: 491 QIYCLFGQYEEALRNLDKTIALNPNFHVARAQRHFVW 527
            +Y    Q+++A+ +    I +NP+   A + R  V+
Sbjct: 894 LVYVNQKQWDKAIDDFTTAIKINPHDAGAYSVRGLVY 930


>gi|282896150|ref|ZP_06304175.1| hypothetical protein CRD_01036 [Raphidiopsis brookii D9]
 gi|281198950|gb|EFA73826.1| hypothetical protein CRD_01036 [Raphidiopsis brookii D9]
          Length = 706

 Score = 98.6 bits (244), Expect = 8e-18,   Method: Compositional matrix adjust.
 Identities = 94/393 (23%), Positives = 172/393 (43%), Gaps = 42/393 (10%)

Query: 148 HAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVA 207
           +   D   A A+ ++A K+DP+  D+Y  RG +    G  + A+ + ++ I L+PN+ +A
Sbjct: 325 YNGGDKQGAIANYNQAIKLDPDYTDAYINRGLVRSELGDRQGAIADYNQAIKLDPNYALA 384

Query: 208 RAQRHFVVHKMIVPGDRERVEQSLKEFRNFVDTHSNVVEACTLFAQVLVDQEDFDGAEEY 267
              R  +VH  +  GDR+    ++ ++   +   SN  +A      V  +  D  GA   
Sbjct: 385 YYNRG-IVHSEL--GDRQ---GAIADYNQAIKLDSNYTDAYYNRGIVRSELGDKQGAIVD 438

Query: 268 FNRSIRVDPENASLYVHRAMLMLQARGNVDEAIKLIEKAISIDKSCMFAYETLGTIEVQR 327
           +N++I+++P   + Y++R ++  +  G+   AI    +AI ++ +   AY   G +  + 
Sbjct: 439 YNQAIKLNPNYTNAYINRGLVRSEL-GDNQVAIADYNQAIKLNPNYALAYYNRGIVHSEL 497

Query: 328 GRLEEAVKCFNKALPLARDEAELSHIYS-LRDAAIAQMKVCERYNIKKKVSPRSQNITKN 386
           G    A+  +N+A+ L  +  +  +    LR     +      YN   K++P   N   N
Sbjct: 498 GDKRGAIADYNQAIRLDHNYTDAYYNRGILRSELGDKQGAIVDYNQAIKLNPNYTNAYIN 557

Query: 387 EKLAIKQLRENNDIIIRPADKGGKTVVMDKADYTQKMTSILNSNDYEIIPGDPTKTIEES 446
             L   +L +N   I               ADY Q +   LN          P   +   
Sbjct: 558 RGLVRSELGDNQVAI---------------ADYNQAIK--LN----------PNYALAYY 590

Query: 447 EKYGNLENESGQKHAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNL 506
            + G + +E G K  A       AD ++A ++DPN  D+YY RG +    G  + A+ + 
Sbjct: 591 NR-GTVHSELGDKRGA------IADYNQAIRLDPNYTDAYYNRGILRSELGDKQGAIDDY 643

Query: 507 DKTIALNPNFHVARAQRHFVWTSTLAELMAFSD 539
           ++ I L+PN+  A   R  + +       A +D
Sbjct: 644 NQAIKLDPNYANAYYNRGIIRSELGYNQGAIAD 676



 Score = 73.6 bits (179), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 74/291 (25%), Positives = 132/291 (45%), Gaps = 19/291 (6%)

Query: 55  DTNESHELDLLSKAKRAFEHEDYLTAIRHCTEEIESTSSNHTKALARLLRATVYIFTSQS 114
           D+ +S  +    KA   +   D   AI +  + I+    ++T A   + R  V       
Sbjct: 308 DSIKSQSIAYFDKAAEQYNGGDKQGAIANYNQAIK-LDPDYTDAY--INRGLVRSELGDR 364

Query: 115 TKAIEDLTQLVEDTSVDPKIKVNAHIKRAVVHLHAASDFTKAFADLDEAEKVDPNVADSY 174
             AI D  Q ++   +DP   + A+  R +VH     D   A AD ++A K+D N  D+Y
Sbjct: 365 QGAIADYNQAIK---LDPNYAL-AYYNRGIVHSELG-DRQGAIADYNQAIKLDSNYTDAY 419

Query: 175 YQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQRHFVVHKMIVPGDRERVEQSLKEF 234
           Y RG +    G  + A+ + ++ I LNPN+  A   R  V  ++   GD    + ++ ++
Sbjct: 420 YNRGIVRSELGDKQGAIVDYNQAIKLNPNYTNAYINRGLVRSEL---GDN---QVAIADY 473

Query: 235 RNFVDTHSNVVEACTLFAQVLVDQE--DFDGAEEYFNRSIRVDPENASLYVHRAMLMLQA 292
              +  + N   A   + + +V  E  D  GA   +N++IR+D      Y +R +L  + 
Sbjct: 474 NQAIKLNPNY--ALAYYNRGIVHSELGDKRGAIADYNQAIRLDHNYTDAYYNRGILRSEL 531

Query: 293 RGNVDEAIKLIEKAISIDKSCMFAYETLGTIEVQRGRLEEAVKCFNKALPL 343
            G+   AI    +AI ++ +   AY   G +  + G  + A+  +N+A+ L
Sbjct: 532 -GDKQGAIVDYNQAIKLNPNYTNAYINRGLVRSELGDNQVAIADYNQAIKL 581



 Score = 49.7 bits (117), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 30/98 (30%), Positives = 50/98 (51%), Gaps = 5/98 (5%)

Query: 117 AIEDLTQLVEDTSVDPKIKVNAHIKRAVVHLHAASDFTKAFADLDEAEKVDPNVADSYYQ 176
           AI D  Q ++   ++P   + A+  R  VH     D   A AD ++A ++DPN  D+YY 
Sbjct: 571 AIADYNQAIK---LNPNYAL-AYYNRGTVHSELG-DKRGAIADYNQAIRLDPNYTDAYYN 625

Query: 177 RGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQRHFV 214
           RG +    G  + A+ + ++ I L+PN+  A   R  +
Sbjct: 626 RGILRSELGDKQGAIDDYNQAIKLDPNYANAYYNRGII 663



 Score = 43.5 bits (101), Expect = 0.26,   Method: Compositional matrix adjust.
 Identities = 32/107 (29%), Positives = 49/107 (45%), Gaps = 5/107 (4%)

Query: 94  NHTKALARLLRATVYIFTSQSTKAIEDLTQLVEDTSVDPKIKVNAHIKRAVVHLHAASDF 153
           N   ALA   R TV+        AI D  Q +    +DP    +A+  R ++      D 
Sbjct: 582 NPNYALAYYNRGTVHSELGDKRGAIADYNQAIR---LDPNY-TDAYYNRGILRSELG-DK 636

Query: 154 TKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIAL 200
             A  D ++A K+DPN A++YY RG I    G  + A+ +  K + +
Sbjct: 637 QGAIDDYNQAIKLDPNYANAYYNRGIIRSELGYNQGAIADFQKAVNI 683



 Score = 43.5 bits (101), Expect = 0.31,   Method: Compositional matrix adjust.
 Identities = 20/72 (27%), Positives = 40/72 (55%)

Query: 455 ESGQKHAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNP 514
           ++ +++   D   A A+ ++A K+DP+  D+Y  RG +    G  + A+ + ++ I L+P
Sbjct: 320 KAAEQYNGGDKQGAIANYNQAIKLDPDYTDAYINRGLVRSELGDRQGAIADYNQAIKLDP 379

Query: 515 NFHVARAQRHFV 526
           N+ +A   R  V
Sbjct: 380 NYALAYYNRGIV 391


>gi|170111310|ref|XP_001886859.1| mitochondrial outer membrane translocase receptor TOM70 [Laccaria
           bicolor S238N-H82]
 gi|164638217|gb|EDR02496.1| mitochondrial outer membrane translocase receptor TOM70 [Laccaria
           bicolor S238N-H82]
          Length = 493

 Score = 97.4 bits (241), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 80/302 (26%), Positives = 136/302 (45%), Gaps = 18/302 (5%)

Query: 76  DYLTAIRHCTEEIE-STSSNHTKALARLLRATVYIFTSQSTKAIEDLTQLVEDTSVDPKI 134
           DY  A+    E +E   S +  KA A  LR T          A  DLT   E   + P  
Sbjct: 188 DYPHAVTLINESLEQGISWDEGKAEALNLRGTFKFLVGDVEGAKVDLT---ESIKLVPSF 244

Query: 135 KVNAHIKRAVVHLHAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNL 194
              + +K A VH+   +    AF   D+A K +PN  D YY RGQ+  +   +  A  N 
Sbjct: 245 -TQSIVKIASVHMEQGNP-KLAFECFDDAIKQNPNDPDIYYHRGQVLFIMNDFANAATNY 302

Query: 195 DKTIALNPNFHVARAQRHFVVHKMIVPGDRERVEQSLKEFRNFVDTHSNVVEACTLFAQV 254
            K+  L+  F  +  Q     +K       + +  S+  FR  +       E    + ++
Sbjct: 303 TKSTELDDQFVFSHIQLAVAQYK------SDHLSNSMATFRRTLVAFPQRSEPQNYYGEL 356

Query: 255 LVDQEDFDGAEEYFNRSIRVDPE------NASLYVHRAMLMLQARGNVDEAIKLIEKAIS 308
           L+DQ+ F+ A E F+++  ++ +      N    V++ + + Q + ++  A K  E+A+ 
Sbjct: 357 LMDQQRFEDAVEKFDKAFEMEKQKVGTIPNVLPLVNKGLALYQWKQDITAAEKCCEEALE 416

Query: 309 IDKSCMFAYETLGTIEVQRGRLEEAVKCFNKALPLARDEAELSHIYSLRDAAIAQMKVCE 368
           ID  C  A  T   + +Q+ ++ +AVK F++   LAR E EL    + + A ++QM+  +
Sbjct: 417 IDPECEAAVATFAQLSLQQSKVGDAVKMFSRQAELARSEPELVSALTFKYATLSQMEFLK 476

Query: 369 RY 370
            Y
Sbjct: 477 NY 478


>gi|254410536|ref|ZP_05024315.1| Tetratricopeptide repeat family [Coleofasciculus chthonoplastes PCC
            7420]
 gi|196182742|gb|EDX77727.1| Tetratricopeptide repeat family [Coleofasciculus chthonoplastes PCC
            7420]
          Length = 1491

 Score = 96.7 bits (239), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 97/426 (22%), Positives = 186/426 (43%), Gaps = 50/426 (11%)

Query: 119  EDLTQLVEDTSVDPKIKVNAHIKRAVVHLHAASDFTKAFADLDEAEKVDPNVADSYYQRG 178
            E LT   +  S+ P    +A   R VV L       +A A+ D+A  + P+   ++  RG
Sbjct: 636  EALTNFDQVISLQPD-DSSAWDNRGVV-LGELGRHEEALANFDQAISLQPDYYQTWDNRG 693

Query: 179  QIYCLFGQYEEALRNLDKTIALNPNFHVARAQRHFVVHKMIVPGDRERVEQSLKEFRNFV 238
                  G+YEEAL N D+ I+L P+++ A   R  V+      G+  R +++L  F   +
Sbjct: 694  AALFKLGRYEEALANFDQVISLQPDYYQAWDNRGVVL------GELGRHKEALANFDQVI 747

Query: 239  DTHSNVVEACTLFAQVLVDQEDFDGAEEYFNRSIRVDPENASLYVHRAMLMLQARGNVDE 298
                +   A      +L +   ++ A   +++ I + P+++S + +R +L+ +  G   E
Sbjct: 748  SLQPDDSSAWFNRGVLLGELGRYEEALTSYDQVISLQPDDSSAWFNRGVLLGEL-GRHKE 806

Query: 299  AIKLIEKAISIDKSCMFAYETLGTIEVQRGRLEEAVKCFNKALPLARDEAELSHIYSLRD 358
            A+   ++ IS+      A++  G +  + GR +EA+  F++ + L  D+    H +  R 
Sbjct: 807  ALTSYDQVISLQPDYYPAWDNRGVVLGELGRHKEALANFDQVISLQPDD---YHAWFKRG 863

Query: 359  AAIAQMKVCER--YNIKKKVS--PRSQNITKNEKLAIKQLRENNDIIIR----------- 403
             A+ ++   E    N  + +S  P       N  +A+ +L  + + +             
Sbjct: 864  VALGELGRYEEALANFDQAISLQPDFYPAWDNRGVALGELGRHEEALANFDQAISLQPDY 923

Query: 404  -PADKGGKTVVMDKADYTQKMTSI-----LNSNDYEIIPGDPTKTIEESEKYGNLENESG 457
             PA      +++    Y + + +      L  + Y+   G   K +  SE          
Sbjct: 924  YPAWDNRGVMLIKLGRYEEALANFDQAISLQPDFYQAWRG---KGVALSE---------- 970

Query: 458  QKHAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFH 517
                   + +A A+ D+A  + P+   ++  RG +    G+YEEAL NLD+ I+L P+++
Sbjct: 971  ----LGRYEEALANFDQAISLQPDYYQTWDNRGLVLIKLGRYEEALANLDQAISLQPDYY 1026

Query: 518  VARAQR 523
             A   R
Sbjct: 1027 QAWFNR 1032



 Score = 81.6 bits (200), Expect = 9e-13,   Method: Compositional matrix adjust.
 Identities = 84/378 (22%), Positives = 161/378 (42%), Gaps = 48/378 (12%)

Query: 153 FTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQRH 212
           + +A A+ D+   + P+   ++  RG      G+YEEAL N D+ I+L P+++ A   R 
Sbjct: 396 YEEALANFDQVISLQPDYYPAWDNRGAALFKLGRYEEALANFDQVISLQPDYYPAWDNRG 455

Query: 213 FVVHKMIVPGDRERVEQSLKEFRNFVDTHSNVVEACTLFAQVLVDQEDFDGAEEYFNRSI 272
             + K+       R E++L  F   +    +   A       L +    + A   F++ I
Sbjct: 456 AALFKL------GRNEEALASFDQVISLQPDDYHAWFKRGVALGELGRNEEALASFDQVI 509

Query: 273 RVDPENASLYVHRAMLMLQARGNVDEAIKLIEKAISIDKSCMFAYETLGTIEVQRGRLEE 332
            + P+    + +R +++ +  G  +EA+   ++AIS+      A+   G    + GR EE
Sbjct: 510 SLQPDYYPAWDNRGVVLFEL-GRNEEALANFDQAISLQPDYSSAWNNRGAALFKLGRHEE 568

Query: 333 AVKCFNKALPLARDEAELSHIYSLRDAAIAQMKVCER--YNIKKKVS--PRSQNITKNEK 388
           A+  F++A+ L  D+    H +  R  A+ ++   E    N  + +S  P   +      
Sbjct: 569 ALTNFDQAISLQPDD---YHAWFKRGVALFKLGRHEEALTNFDQVISLQPDDYHAWFKRG 625

Query: 389 LAIKQLRENNDIIIRPADKGGKTVVMDKADYTQKMTSILNSNDYEIIPGDPTKTIEESEK 448
           +A+ +L  + + +                           +N  ++I   P  +     +
Sbjct: 626 VALFKLGRHEEAL---------------------------TNFDQVISLQPDDSSAWDNR 658

Query: 449 YGNLENESGQKHAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDK 508
            G +  E G+        +A A+ D+A  + P+   ++  RG      G+YEEAL N D+
Sbjct: 659 -GVVLGELGRHE------EALANFDQAISLQPDYYQTWDNRGAALFKLGRYEEALANFDQ 711

Query: 509 TIALNPNFHVARAQRHFV 526
            I+L P+++ A   R  V
Sbjct: 712 VISLQPDYYQAWDNRGVV 729



 Score = 75.5 bits (184), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 83/388 (21%), Positives = 159/388 (40%), Gaps = 52/388 (13%)

Query: 145 VHLHAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNF 204
           V L+    + +A A  D+A  + P+    +  RG +    G+++EAL + D+ I+L P++
Sbjct: 184 VTLYELGRYEEALAKFDQAISLQPDYYHPWDNRGGVLIKLGRHKEALASFDRAISLQPDY 243

Query: 205 HVARAQRHFVVHKMIVPGDRERVEQSLKEFRNFVDTHSNVVEACTLFAQVLVDQEDFDGA 264
           + A   R  V+      G   R +++L      +    +  +        L +   ++ A
Sbjct: 244 YQAWRGRGVVL------GMLGRHKEALANLDQAISLQPDFYKTWDNRGAALGELGRYEEA 297

Query: 265 EEYFNRSIRVDPENASLYVHRAMLMLQARGNVDEAIKLIEKAISIDKSCMFAYETLGTIE 324
              F+++I + P+++S + +R +++ +  G  +EA+   ++ IS+      A+  LG   
Sbjct: 298 LANFDQAISLQPDDSSAWNNRGVVLFKL-GRNEEALASFDQVISLQPDDYHAWFKLGVAL 356

Query: 325 VQRGRLEEAVKCFNKALPLARDEAELSHIYSLRDAAIAQMKVCERYNIKKKVSPRSQNIT 384
            + GR EEA+  F++ + L  D       Y   D   A +    RY              
Sbjct: 357 GELGRNEEALASFDQVISLQPD------YYPAWDNRGAALFKLGRY-------------- 396

Query: 385 KNEKLAIKQLRENNDIIIR------PADKGGKTVVMDKADYTQKMTSILNSNDYEIIPGD 438
             E LA      N D +I       PA       +     Y + +     +N  ++I   
Sbjct: 397 -EEALA------NFDQVISLQPDYYPAWDNRGAALFKLGRYEEAL-----ANFDQVISLQ 444

Query: 439 PTKTIEESEKYGNLENESGQKHAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQ 498
           P       + Y   +N            +A A  D+   + P+   ++++RG      G+
Sbjct: 445 P-------DYYPAWDNRGAALFKLGRNEEALASFDQVISLQPDDYHAWFKRGVALGELGR 497

Query: 499 YEEALRNLDKTIALNPNFHVARAQRHFV 526
            EEAL + D+ I+L P+++ A   R  V
Sbjct: 498 NEEALASFDQVISLQPDYYPAWDNRGVV 525



 Score = 70.5 bits (171), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 66/295 (22%), Positives = 135/295 (45%), Gaps = 19/295 (6%)

Query: 104  RATVYIFTSQSTKAIEDLTQLVEDTSVDPKIKVNAHIKRAVVHLHAASDFTKAFADLDEA 163
            R  V     +  +A+ +  Q++   S+ P    +A  KR V  L     + +A A+ D+A
Sbjct: 828  RGVVLGELGRHKEALANFDQVI---SLQPD-DYHAWFKRGVA-LGELGRYEEALANFDQA 882

Query: 164  EKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQRHFVVHKMIVPGD 223
              + P+   ++  RG      G++EEAL N D+ I+L P+++ A   R  ++ K+     
Sbjct: 883  ISLQPDFYPAWDNRGVALGELGRHEEALANFDQAISLQPDYYPAWDNRGVMLIKL----- 937

Query: 224  RERVEQSLKEFRNFVDTHSNVVEACTLFAQVLVDQEDFDGAEEYFNRSIRVDPENASLYV 283
              R E++L  F   +    +  +A       L +   ++ A   F+++I + P+    + 
Sbjct: 938  -GRYEEALANFDQAISLQPDFYQAWRGKGVALSELGRYEEALANFDQAISLQPDYYQTWD 996

Query: 284  HRAMLMLQARGNVDEAIKLIEKAISIDKSCMFAYETLGTIEVQRGRLEEAVKCFNKALPL 343
            +R +++++  G  +EA+  +++AIS+      A+     +    GR  EA+   ++ + L
Sbjct: 997  NRGLVLIKL-GRYEEALANLDQAISLQPDYYQAWFNRSAMLSNLGRYREALTSDDQVISL 1055

Query: 344  ARDEAELSHIYSLRDAAIAQMKVCER--YNIKKKVSPRSQNITK--NEKLAIKQL 394
              D+ +  H    R AA+ ++   E    N  + +S R  +     N  +A+ +L
Sbjct: 1056 QPDDYQAWHN---RGAALGELGRYEEALANFDQAISLRPDDYQDWLNRGIALGEL 1107



 Score = 55.8 bits (133), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 41/178 (23%), Positives = 83/178 (46%), Gaps = 7/178 (3%)

Query: 145  VHLHAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNF 204
            V L     + +A A+ D+A  + P+   ++  RG +    G+YEEAL NLD+ I+L P++
Sbjct: 966  VALSELGRYEEALANFDQAISLQPDYYQTWDNRGLVLIKLGRYEEALANLDQAISLQPDY 1025

Query: 205  HVARAQRHFVVHKMIVPGDRERVEQSLKEFRNFVDTHSNVVEACTLFAQVLVDQEDFDGA 264
            + A   R  ++  +       R  ++L      +    +  +A       L +   ++ A
Sbjct: 1026 YQAWFNRSAMLSNL------GRYREALTSDDQVISLQPDDYQAWHNRGAALGELGRYEEA 1079

Query: 265  EEYFNRSIRVDPENASLYVHRAMLMLQARGNVDEAIKLIEKAISIDKSCMFAYETLGT 322
               F+++I + P++   +++R +  L   G  +EA+   ++AIS+      A+   G 
Sbjct: 1080 LANFDQAISLRPDDYQDWLNRGI-ALGELGRHEEALASCDQAISLQPDYYQAWSNRGV 1136


>gi|430741335|ref|YP_007200464.1| hypothetical protein Sinac_0326 [Singulisphaera acidiphila DSM
           18658]
 gi|430013055|gb|AGA24769.1| tetratricopeptide repeat protein [Singulisphaera acidiphila DSM
           18658]
          Length = 779

 Score = 95.5 bits (236), Expect = 6e-17,   Method: Compositional matrix adjust.
 Identities = 118/514 (22%), Positives = 217/514 (42%), Gaps = 62/514 (12%)

Query: 56  TNESHELDLLS-----KAKRAFEHEDYLTAIRHCTEEI-----ESTSSNHTKALARLLRA 105
           T E+H LD L+     K +  F    YL  +    EE      E+   N   A A   R 
Sbjct: 90  TPETHALDFLTNYFIIKKQLVFH---YLIGLVWLKEEDIAEYDEAIRLNPNDASAYFNRG 146

Query: 106 TVYIFTSQSTKAIEDLTQLVEDTSVDPKIKVNAHIKRAVVHLHAASDFTKAFADLDEAEK 165
             +    +  KAI D  + +    +DP++ +  H +         +D+ KA  D +EA +
Sbjct: 147 YAWSERQEYDKAIADYNEAIR---LDPQLTLAYHNRGYA--WSQKNDYDKAITDYNEAIR 201

Query: 166 VDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQRHFVVHKMIVPGDRE 225
           +DP+ A +Y+ RG  +     Y++ + + ++ I L+P+     A  +F  ++      +E
Sbjct: 202 LDPDDASAYFNRGYAWSKKKDYDKTIADYNEAIRLDPD----DAPTYF--NRAHAWSQKE 255

Query: 226 RVEQSLKEFRNFVDTHSNVVEACTLFAQVLVDQEDFDGAEEYFNRSIRVDPENASLYVHR 285
             ++++ ++   +    +   A          + D D A   +N +IR+DP N   Y +R
Sbjct: 256 DYDKTIADYNEAIRLDPDDASAYFNRGHAWSQKGDLDKAIADYNETIRLDPTNTPAYFNR 315

Query: 286 AMLMLQARGNVDEAIKLIEKAISIDKSCMFAYETLGTIEVQRGRLEEAVKCFNKALPL-- 343
                Q +G++D+AI   ++AI +D +   AY   G    ++G  ++A+  FN+A+ L  
Sbjct: 316 GYAWNQ-KGDLDKAIADFDEAIRLDPNDASAYVNQGCAWGEKGEHDKAIADFNEAIRLDP 374

Query: 344 ARDEAEL--SHIYS--------LRDA----------AIAQMKVCERYNIKK--------- 374
               A L  SH +S        + DA          A A  K    +  KK         
Sbjct: 375 TNTWAYLNRSHAWSEKEEYDKAIADANEIIRLDPQNAWAYFKRGYAWGKKKEHDKAIADD 434

Query: 375 ----KVSPRSQNITKNEKLAIKQLRENNDIIIRPADKGGKTVVMDKADYTQKMTSILNSN 430
               ++ P +     N   A  + +E +D  I   +K  +    +   Y  +  +     
Sbjct: 435 NEAIRLDPTNAWAYLNRGYAWDE-KEEHDKAITDFNKAIRLDPTNTWAYFNRGYAWGQKE 493

Query: 431 DYEIIPGDPTKTIEESEKYGNLENESGQKHA-ASDFTKAFADLDEAEKVDPNVADSYYQR 489
           DY+    D  + I+    Y +     G   +  +D+ KA AD ++A ++DP  A +Y+ R
Sbjct: 494 DYDKAIADFNEAIQLDPNYTSAYLNRGYAWSQKNDYDKAIADFNKAIRLDPINAPAYFNR 553

Query: 490 GQIYCLFGQYEEALRNLDKTIALNPNFHVARAQR 523
           G  +     Y++A+ + ++ I L+PN  +A   R
Sbjct: 554 GHAWSQKEGYDKAIADYNEAIRLDPNNALAYLNR 587



 Score = 91.3 bits (225), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 116/497 (23%), Positives = 201/497 (40%), Gaps = 38/497 (7%)

Query: 52  TNGDTNESHELD------LLSKAKRAFEHEDYLTAIRHCTEEIESTSSNHTKALARLLRA 105
           T  D NE+  LD        ++A    + EDY   I    E I     +   A A   R 
Sbjct: 226 TIADYNEAIRLDPDDAPTYFNRAHAWSQKEDYDKTIADYNEAIRLDPDD---ASAYFNRG 282

Query: 106 TVYIFTSQSTKAIEDLTQLVEDTSVDPKIKVNAHIKRAVVHLHAASDFTKAFADLDEAEK 165
             +       KAI D  + +    +DP     A+  R     +   D  KA AD DEA +
Sbjct: 283 HAWSQKGDLDKAIADYNETIR---LDP-TNTPAYFNRGYA-WNQKGDLDKAIADFDEAIR 337

Query: 166 VDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQRHFVVHKMIVPGDRE 225
           +DPN A +Y  +G  +   G++++A+ + ++ I L+P    A   R           ++E
Sbjct: 338 LDPNDASAYVNQGCAWGEKGEHDKAIADFNEAIRLDPTNTWAYLNRSHAW------SEKE 391

Query: 226 RVEQSLKEFRNFVDTHSNVVEACTLFAQVLVDQEDFDGAEEYFNRSIRVDPENASLYVHR 285
             ++++ +    +        A          +++ D A    N +IR+DP NA  Y++R
Sbjct: 392 EYDKAIADANEIIRLDPQNAWAYFKRGYAWGKKKEHDKAIADDNEAIRLDPTNAWAYLNR 451

Query: 286 AMLMLQARGNVDEAIKLIEKAISIDKSCMFAYETLGTIEVQRGRLEEAVKCFNKALPLAR 345
                + +   D+AI    KAI +D +  +AY   G    Q+   ++A+  FN+A+ L  
Sbjct: 452 GYAWDE-KEEHDKAITDFNKAIRLDPTNTWAYFNRGYAWGQKEDYDKAIADFNEAIQL-- 508

Query: 346 DEAELSHIYSLRDAAIAQM----KVCERYNIKKKVSPRSQNITKNEKLAIKQLRENNDII 401
            +   +  Y  R  A +Q     K    +N   ++ P +     N   A  Q +E  D  
Sbjct: 509 -DPNYTSAYLNRGYAWSQKNDYDKAIADFNKAIRLDPINAPAYFNRGHAWSQ-KEGYDKA 566

Query: 402 IRPADKGGKTVVMDKADYTQKMTSILNSNDYEIIPGDPTKTIEESEKYGNLE-----NES 456
           I   ++  +    +   Y  +  +   + +++    D  + I    K  N         S
Sbjct: 567 IADYNEAIRLDPNNALAYLNRGHARSKTQEHDKAIADYNEAIRIDPKAANAYIYRAITWS 626

Query: 457 GQKHAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNF 516
            +K    D+ KA  D  EA ++DP  A S+  RG  +     Y +A+ + ++ I LNP  
Sbjct: 627 RKK----DYDKAITDFTEAIRIDPKDASSHSNRGYAWSKKKDYAKAIADYNEAIQLNPKL 682

Query: 517 HVARAQRHFVWTSTLAE 533
             A   R ++W +   E
Sbjct: 683 ASAYNNRAWIWATCPGE 699



 Score = 86.3 bits (212), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 117/490 (23%), Positives = 206/490 (42%), Gaps = 38/490 (7%)

Query: 54  GDTNESHELD---LLSKAKRAF---EHEDYLTAIRHCTEEIESTSSNHTKALARLLRATV 107
            D NE+  LD    L+   R +   +  DY  AI    E I     +   A A   R   
Sbjct: 160 ADYNEAIRLDPQLTLAYHNRGYAWSQKNDYDKAITDYNEAIRLDPDD---ASAYFNRGYA 216

Query: 108 YIFTSQSTKAIEDLTQLVEDTSVDPKIKVNAHIKRAVVHLHAAS---DFTKAFADLDEAE 164
           +       K I D  + +    +DP      +  RA    HA S   D+ K  AD +EA 
Sbjct: 217 WSKKKDYDKTIADYNEAIR---LDPD-DAPTYFNRA----HAWSQKEDYDKTIADYNEAI 268

Query: 165 KVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQRHFVVHKMIVPGDR 224
           ++DP+ A +Y+ RG  +   G  ++A+ + ++TI L+P    A   R +  ++    GD 
Sbjct: 269 RLDPDDASAYFNRGHAWSQKGDLDKAIADYNETIRLDPTNTPAYFNRGYAWNQK---GD- 324

Query: 225 ERVEQSLKEFRNFVDTHSNVVEACTLFAQVLVDQEDFDGAEEYFNRSIRVDPENASLYVH 284
             +++++ +F   +    N   A         ++ + D A   FN +IR+DP N   Y++
Sbjct: 325 --LDKAIADFDEAIRLDPNDASAYVNQGCAWGEKGEHDKAIADFNEAIRLDPTNTWAYLN 382

Query: 285 RAMLMLQARGNVDEAIKLIEKAISIDKSCMFAYETLGTIEVQRGRLEEAVKCFNKALPL- 343
           R+    + +   D+AI    + I +D    +AY   G    ++   ++A+   N+A+ L 
Sbjct: 383 RSHAWSE-KEEYDKAIADANEIIRLDPQNAWAYFKRGYAWGKKKEHDKAIADDNEAIRLD 441

Query: 344 -ARDEAELSHIYSLRDAAIAQMKVCERYNIKKKVSPRSQNITKNEKLAIKQLRENNDIII 402
                A L+  Y+  D      K    +N   ++ P +     N   A  Q +E+ D  I
Sbjct: 442 PTNAWAYLNRGYAW-DEKEEHDKAITDFNKAIRLDPTNTWAYFNRGYAWGQ-KEDYDKAI 499

Query: 403 RPADKGGKTVVMDKADYTQKMTSILNSNDYEIIPGDPTKTIE----ESEKYGNLENESGQ 458
              ++  +      + Y  +  +    NDY+    D  K I      +  Y N  +   Q
Sbjct: 500 ADFNEAIQLDPNYTSAYLNRGYAWSQKNDYDKAIADFNKAIRLDPINAPAYFNRGHAWSQ 559

Query: 459 KHAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHV 518
           K     + KA AD +EA ++DPN A +Y  RG       ++++A+ + ++ I ++P    
Sbjct: 560 KEG---YDKAIADYNEAIRLDPNNALAYLNRGHARSKTQEHDKAIADYNEAIRIDPKAAN 616

Query: 519 ARAQRHFVWT 528
           A   R   W+
Sbjct: 617 AYIYRAITWS 626



 Score = 74.3 bits (181), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 77/291 (26%), Positives = 129/291 (44%), Gaps = 28/291 (9%)

Query: 250 LFAQVLVDQEDFDGAEEYFNRSIRVDPENASLYVHRAMLMLQARGNVDEAIKLIEKAISI 309
           L   V + +ED   AE  ++ +IR++P +AS Y +R     + R   D+AI    +AI +
Sbjct: 114 LIGLVWLKEEDI--AE--YDEAIRLNPNDASAYFNRGYAWSE-RQEYDKAIADYNEAIRL 168

Query: 310 DKSCMFAYETLGTIEVQRGRLEEAVKCFNKALPLARDEAELSHIYSLRDAAIAQMKVCER 369
           D     AY   G    Q+   ++A+  +N+A+ L  D+A     Y  R  A ++ K  ++
Sbjct: 169 DPQLTLAYHNRGYAWSQKNDYDKAITDYNEAIRLDPDDAS---AYFNRGYAWSKKKDYDK 225

Query: 370 ----YNIKKKVSPRSQNITKNEKLAIKQLRENNDIIIRPADKGGKTVVMDKADYTQKMTS 425
               YN   ++ P       N   A  Q +E+ D  I   ++  +    D + Y  +  +
Sbjct: 226 TIADYNEAIRLDPDDAPTYFNRAHAWSQ-KEDYDKTIADYNEAIRLDPDDASAYFNRGHA 284

Query: 426 ILNSNDY--------EIIPGDPTKTIEESEKYGNLENESGQKHAASDFTKAFADLDEAEK 477
                D         E I  DPT T     + G   N+ G      D  KA AD DEA +
Sbjct: 285 WSQKGDLDKAIADYNETIRLDPTNTPAYFNR-GYAWNQKG------DLDKAIADFDEAIR 337

Query: 478 VDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQRHFVWT 528
           +DPN A +Y  +G  +   G++++A+ + ++ I L+P    A   R   W+
Sbjct: 338 LDPNDASAYVNQGCAWGEKGEHDKAIADFNEAIRLDPTNTWAYLNRSHAWS 388



 Score = 69.7 bits (169), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 82/385 (21%), Positives = 154/385 (40%), Gaps = 78/385 (20%)

Query: 158 ADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQRHFVVHK 217
           A+ DEA +++PN A +Y+ RG  +    +Y++A+ + ++ I L+P   +A   R +   +
Sbjct: 126 AEYDEAIRLNPNDASAYFNRGYAWSERQEYDKAIADYNEAIRLDPQLTLAYHNRGYAWSQ 185

Query: 218 MIVPGDRERVEQSLKEFRNFVDTHSNVVEACTLFAQVLVDQEDFDGAEEYFNRSIRVDPE 277
                 +   ++++ ++   +    +   A          ++D+D     +N +IR+DP+
Sbjct: 186 ------KNDYDKAITDYNEAIRLDPDDASAYFNRGYAWSKKKDYDKTIADYNEAIRLDPD 239

Query: 278 NASLYVHRAMLMLQARGNVDEAIKLIEKAISIDKSCMFAYETLGTIEVQRGRLEEAVKCF 337
           +A  Y +RA    Q + + D+ I    +AI +D     AY   G    Q+G L       
Sbjct: 240 DAPTYFNRAHAWSQ-KEDYDKTIADYNEAIRLDPDDASAYFNRGHAWSQKGDL------- 291

Query: 338 NKALPLARDEAELSHIYSLRDAAIAQMKVCERYNIKKKVSPRSQNITKNEKLAIKQLREN 397
                               D AIA       YN   ++ P +     N   A  Q    
Sbjct: 292 --------------------DKAIAD------YNETIRLDPTNTPAYFNRGYAWNQ---- 321

Query: 398 NDIIIRPADKGGKTVVMDKA--DYTQKMTSILNSNDYEIIPGDPTKTIEESEKYGNLENE 455
                    KG     +DKA  D+ + +          + P D +  + +   +G    E
Sbjct: 322 ---------KGD----LDKAIADFDEAI---------RLDPNDASAYVNQGCAWG----E 355

Query: 456 SGQKHAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPN 515
            G+        KA AD +EA ++DP    +Y  R   +    +Y++A+ + ++ I L+P 
Sbjct: 356 KGE------HDKAIADFNEAIRLDPTNTWAYLNRSHAWSEKEEYDKAIADANEIIRLDPQ 409

Query: 516 FHVARAQRHFVWTSTLAELMAFSDE 540
              A  +R + W        A +D+
Sbjct: 410 NAWAYFKRGYAWGKKKEHDKAIADD 434



 Score = 59.7 bits (143), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 50/161 (31%), Positives = 72/161 (44%), Gaps = 10/161 (6%)

Query: 73  EHEDYLTAIRHCTEEIESTSSNHTKALARLLRATVYIFTSQSTKAIEDLTQLVEDTSVDP 132
           + E Y  AI    E I    +N   ALA L R      T +  KAI D  + +    +DP
Sbjct: 559 QKEGYDKAIADYNEAIRLDPNN---ALAYLNRGHARSKTQEHDKAIADYNEAIR---IDP 612

Query: 133 KIKVNAHIKRAVVHLHAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALR 192
           K   NA+I RA+       D+ KA  D  EA ++DP  A S+  RG  +     Y +A+ 
Sbjct: 613 KA-ANAYIYRAIT-WSRKKDYDKAITDFTEAIRIDPKDASSHSNRGYAWSKKKDYAKAIA 670

Query: 193 NLDKTIALNPNFHVARAQRHFVVHKMIVPGDRERVEQSLKE 233
           + ++ I LNP    A   R ++      PG++ R  Q   E
Sbjct: 671 DYNEAIQLNPKLASAYNNRAWIW--ATCPGEQYRDGQKAVE 709


>gi|355570991|ref|ZP_09042261.1| Tetratricopeptide TPR_1 repeat-containing protein [Methanolinea tarda
            NOBI-1]
 gi|354826273|gb|EHF10489.1| Tetratricopeptide TPR_1 repeat-containing protein [Methanolinea tarda
            NOBI-1]
          Length = 1104

 Score = 94.7 bits (234), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 110/470 (23%), Positives = 202/470 (42%), Gaps = 68/470 (14%)

Query: 75   EDYLTAIRHCTEEIESTSSNHTKALARLLRATVYIFTSQSTKAIEDLTQLVEDTSVDPKI 134
            EDY  AIR     +E+ ++          RAT Y    +   A+EDL++ +E    D   
Sbjct: 665  EDYSNAIRLNGRSVEALTA----------RATEYSRLGRYEDAVEDLSRALEQAPGD--- 711

Query: 135  KVNAHIKRAVVHLHAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNL 194
             V+  + R +++        +A AD  +  ++DP    +Y  RG +    G   EA+ + 
Sbjct: 712  -VSILLARGLLYERLGM-IDEAIADYSKVIEIDPGHEKAYINRGNLLAGKGLSSEAIADF 769

Query: 195  DKTIALNPNFHVARAQRHFVVHKMIVPGDRERVEQSLKEFRNFVDTHSNVVEACTLFAQV 254
             + I +NP   VA        ++ I  G+R  +++++ +    V    ++ EA       
Sbjct: 770  SRVIEINPGNAVA------FYNRGIEYGERGMLDEAIMDLGKAVMLRPDLAEAYYNRGVA 823

Query: 255  LVDQEDFDGAEEYFNRSIRVDPENASLYVHRAMLMLQARGNVDEAIKLIEKAISIDKSCM 314
               +   + A   +NR++ + P+N   Y +R      A G  DEAI+   +AI I+    
Sbjct: 824  YHKKGMLEEAIADYNRALELSPDNEKAYNNRGNAH-AALGMYDEAIEDFSRAIEINPDNP 882

Query: 315  FAYETLGTIEVQRGRLEEAVKCFNKALPLARDEAELSHIYSLRDAAIAQMKVCER----Y 370
             AY   G    ++G +E+A++ F++A+ +  D   L+  Y  R  A  +++  E     Y
Sbjct: 883  TAYYNRGIEYGKKGLIEKAMEDFSRAIAIKPD---LAEAYYNRGVAYQRVERYEEAIADY 939

Query: 371  NIKKKVSPRSQNITKNEKLAIKQLRENNDIIIRPADKGGKTVVMDKADYTQKMTSILNSN 430
            +   ++SP ++    N   A   L   N+ +               +D+++ +       
Sbjct: 940  SRAIQISPANEKAYNNRGNAHAALGMYNEAV---------------SDFSRAI------- 977

Query: 431  DYEIIPGDPTKTIEESEKYGNLENESGQKHAASDFTKAFADLDEAEKVDPNVADSYYQRG 490
              EI P +PT        Y N   E G+K     F +A AD  +A  + P++A++YY  G
Sbjct: 978  --EINPDNPTA-------YYNRGIEYGKK---GFFDEAIADFSKAVGLRPDLAEAYYNMG 1025

Query: 491  QIYCLFGQYEEALRNLDKTIALNPNFHVARAQRHFVWTSTLAELMAFSDE 540
             IY       EA+R  D+ + + P +      R F+  +   E ++ ++E
Sbjct: 1026 NIYYNRNMCREAIREFDRALGVKPGY-----ARAFLNKALAYEKLSMTEE 1070



 Score = 81.3 bits (199), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 97/435 (22%), Positives = 174/435 (40%), Gaps = 85/435 (19%)

Query: 120 DLTQLVEDTSVDPKIKVNAHIKRAVVHLHAASDFTK----AFADLDEAEKVDPNVADSYY 175
           D    +ED S    I++N H   A  +   A         A +D   A  +D +  ++YY
Sbjct: 52  DYPGAIEDYSA--AIRINPHFSEAFYNRGVAYSLLNRPENAISDFTSAVNLDTDFVEAYY 109

Query: 176 QRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQRHFVVHKMIVPGDRERVEQSLKEFR 235
            RG  Y   G+YE A+ +  K I+LNP++  A   R  V+H       R   E++++++ 
Sbjct: 110 NRGLEYARIGEYELAIADFSKAISLNPSYAAAYNNRG-VIHAR-----RGMHEKAIEDYT 163

Query: 236 NFVDTHSNVVEACTLFAQVLVDQEDFDGAEEYFNRSIRVDPENASLYVHRAML---MLQA 292
              +   +  EA             F+ A   + R++ + PE A +  +R +    + Q+
Sbjct: 164 RAFELDPSFSEALFNRGIEFSRLGHFEDAVADYTRALEITPEKADILYNRGLAYGKLGQS 223

Query: 293 RGNVDEAIKLIE------------------------------KAISIDKSCMFAYETLGT 322
              + + ++ +E                              KAI I+ S + AY   G 
Sbjct: 224 EAAIADYLQCLEKNPSYAEAHNNLGVEYSHLGLLETALDHYAKAIEINPSFVEAYNNRGV 283

Query: 323 IEVQRGRLEEAVKCFNKALPLARDEAELSHIYSLRDAAIAQMKVCERYNIKKKVSPRSQN 382
           +  + GR +EA+  F++AL +  +E +   +    +A+++ M          + +P  Q 
Sbjct: 284 LFNRMGRFDEAIAEFSRALEIISEETQAEAVTPQPEASLSGMAA--------ETAP-GQG 334

Query: 383 ITKNEKLAIKQLRENNDIIIRPADKGGKTVVMDKADYTQKMTSILNSNDYEIIPGDPTKT 442
               E        E  +  I P ++    +V D A   +++T  +N +     P DP   
Sbjct: 335 APGGE--------EKGETTIPPVEE----LVEDPA--IRQLTDEINRS-----PDDPELY 375

Query: 443 IEESEKYGNLENESGQKHAA-SDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEE 501
                +Y  L    GQ   A  DFT+A         +DP   ++Y+ RG  Y   G  +E
Sbjct: 376 NRRGVEYSRL----GQSEKAIEDFTRAI-------DIDPGYIEAYFNRGNEYDRLGMVDE 424

Query: 502 ALRNLDKTIALNPNF 516
           A+ +    + +NP F
Sbjct: 425 AIADYTHALKINPKF 439



 Score = 80.1 bits (196), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 96/402 (23%), Positives = 167/402 (41%), Gaps = 50/402 (12%)

Query: 154  TKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPN---FHVARAQ 210
            ++A AD   A ++DP + D+Y  RGQ     GQ E+A+ +    I LN        ARA 
Sbjct: 627  SEAIADFSRALEIDPRLFDAYIGRGQERSRCGQPEKAVEDYSNAIRLNGRSVEALTARAT 686

Query: 211  RHFVVHKM------------IVPGD------RERVEQSLKEFRNFVDTHSNVVEACTLFA 252
             +  + +               PGD      R  + + L      +  +S V+E      
Sbjct: 687  EYSRLGRYEDAVEDLSRALEQAPGDVSILLARGLLYERLGMIDEAIADYSKVIEIDPGHE 746

Query: 253  QVLVDQEDFDGAEEY-------FNRSIRVDPENASLYVHRAMLMLQARGNVDEAIKLIEK 305
            +  +++ +    +         F+R I ++P NA  + +R +   + RG +DEAI  + K
Sbjct: 747  KAYINRGNLLAGKGLSSEAIADFSRVIEINPGNAVAFYNRGIEYGE-RGMLDEAIMDLGK 805

Query: 306  AISIDKSCMFAYETLGTIEVQRGRLEEAVKCFNKALPLARDEAELSH-------IYSLRD 358
            A+ +      AY   G    ++G LEEA+  +N+AL L+ D  +  +          + D
Sbjct: 806  AVMLRPDLAEAYYNRGVAYHKKGMLEEAIADYNRALELSPDNEKAYNNRGNAHAALGMYD 865

Query: 359  AAIAQMKVCERYNIKKKVSPRSQNITKNEKLAIKQLREN--NDIIIRPADKGGKTVVMDK 416
             AI         N     +  ++ I   +K  I++  E+    I I+P          D 
Sbjct: 866  EAIEDFSRAIEINPDNPTAYYNRGIEYGKKGLIEKAMEDFSRAIAIKP----------DL 915

Query: 417  AD-YTQKMTSILNSNDYEIIPGDPTKTIEESEKYGNLENESGQKHAA-SDFTKAFADLDE 474
            A+ Y  +  +      YE    D ++ I+ S       N  G  HAA   + +A +D   
Sbjct: 916  AEAYYNRGVAYQRVERYEEAIADYSRAIQISPANEKAYNNRGNAHAALGMYNEAVSDFSR 975

Query: 475  AEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNF 516
            A +++P+   +YY RG  Y   G ++EA+ +  K + L P+ 
Sbjct: 976  AIEINPDNPTAYYNRGIEYGKKGFFDEAIADFSKAVGLRPDL 1017



 Score = 70.1 bits (170), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 112/493 (22%), Positives = 198/493 (40%), Gaps = 70/493 (14%)

Query: 80  AIRHCTEEIESTSSNHTKALARLLRATVYIFTSQSTKAIEDLTQLVEDTSVDPKIKVNAH 139
           AIR  T+EI + S +  +   R  R   Y    QS KAIED T+ ++   +DP   + A+
Sbjct: 357 AIRQLTDEI-NRSPDDPELYNR--RGVEYSRLGQSEKAIEDFTRAID---IDPGY-IEAY 409

Query: 140 IKRAVVHLHAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIA 199
             R   +        +A AD   A K++P  A++ + RG  Y      + A+    K + 
Sbjct: 410 FNRGNEYDRLGM-VDEAIADYTHALKINPKFAEACFARGIEYQKANLSDRAISEFTKALE 468

Query: 200 LNPNFHVARAQRHFVVHKMIVPGDRERVEQSLKEFRNFVDTHSNVVEACTLFAQVLVDQE 259
           + P +  A  QR     K+ +       + ++++F   ++      EA    A+    + 
Sbjct: 469 IRPAYPDALYQRGCEFAKIGLS------DMAVRDFSRALEIRGQFFEALVARAEQYSRKG 522

Query: 260 DFDGAEEYFNRSIRVDPENASLYVHRAMLMLQARGNVDEAIKLIEKAISIDKSCMFAYET 319
             + A E    ++ ++P +A LYV R +   ++ G ++EA+    KAI ++ S   AY  
Sbjct: 523 LSERATEDLTAALALEPTSAGLYVRRGIEQSRS-GKIEEALADFSKAIGMEPSNADAYFQ 581

Query: 320 LGTIEVQRGRLEEAVKCFNKALPL-----------ARDEAELSHIYS------------- 355
              I  ++GR EE+    ++ + L            R  +EL +                
Sbjct: 582 RALILQKQGRFEESASDISRVIELRPADAQAYLFRGRQNSELGNSSEAIADFSRALEIDP 641

Query: 356 -LRDAAIAQM----------KVCERYNIKKKVSPRSQNITKNEKLAIKQLRENNDII--- 401
            L DA I +           K  E Y+   +++ RS            +L    D +   
Sbjct: 642 RLFDAYIGRGQERSRCGQPEKAVEDYSNAIRLNGRSVEALTARATEYSRLGRYEDAVEDL 701

Query: 402 IRPADK--GGKTVVMDKADYTQKMTSILNS-NDY----EIIPGDPTKTIEESEKYGNLEN 454
            R  ++  G  ++++ +    +++  I  +  DY    EI PG     I      GNL  
Sbjct: 702 SRALEQAPGDVSILLARGLLYERLGMIDEAIADYSKVIEIDPGHEKAYINR----GNLLA 757

Query: 455 ESGQKHAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNP 514
             G        ++A AD     +++P  A ++Y RG  Y   G  +EA+ +L K + L P
Sbjct: 758 GKGLS------SEAIADFSRVIEINPGNAVAFYNRGIEYGERGMLDEAIMDLGKAVMLRP 811

Query: 515 NFHVARAQRHFVW 527
           +   A   R   +
Sbjct: 812 DLAEAYYNRGVAY 824



 Score = 59.7 bits (143), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 81/377 (21%), Positives = 148/377 (39%), Gaps = 92/377 (24%)

Query: 145 VHLHAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNF 204
           +  H    F +A AD   A +++P+ A++Y+ RG        Y  A+ +    I +NP+F
Sbjct: 11  IAYHKKGLFDEAIADYTRAIEINPDDAEAYHNRGVAKAGKHDYPGAIEDYSAAIRINPHF 70

Query: 205 HVARAQRHFVVHKMIVPGDRERVEQSLKEFRNFVDTHSNVVEACTLFAQVLVDQEDFDGA 264
             A   R  V + ++      R E ++ +F + V+  ++ VEA                 
Sbjct: 71  SEAFYNRG-VAYSLL-----NRPENAISDFTSAVNLDTDFVEA----------------- 107

Query: 265 EEYFNRSIRVDPENASLYVHRAMLMLQARGNVDEAIKLIEKAISIDKSCMFAYETLGTIE 324
             Y+NR +    E A +            G  + AI    KAIS++ S   AY   G I 
Sbjct: 108 --YYNRGL----EYARI------------GEYELAIADFSKAISLNPSYAAAYNNRGVIH 149

Query: 325 VQRGRLEEAVKCFNKALPL--ARDEA------ELSHIYSLRDAAIAQMKVCERYNIKKKV 376
            +RG  E+A++ + +A  L  +  EA      E S +    DA     +  E       +
Sbjct: 150 ARRGMHEKAIEDYTRAFELDPSFSEALFNRGIEFSRLGHFEDAVADYTRALE-------I 202

Query: 377 SPRSQNITKNEKLAIKQLRENNDIIIRPADKGGKTVVMDKADYTQKMTSILNSNDYEIIP 436
           +P   +I  N  LA  +L ++   I               ADY Q               
Sbjct: 203 TPEKADILYNRGLAYGKLGQSEAAI---------------ADYLQ--------------- 232

Query: 437 GDPTKTIEESEKYGNLENESGQKHAASDFTKAFAD-LDEAEKVDPNVADSYYQRGQIYCL 495
                 +E++  Y    N  G +++     +   D   +A +++P+  ++Y  RG ++  
Sbjct: 233 -----CLEKNPSYAEAHNNLGVEYSHLGLLETALDHYAKAIEINPSFVEAYNNRGVLFNR 287

Query: 496 FGQYEEALRNLDKTIAL 512
            G+++EA+    + + +
Sbjct: 288 MGRFDEAIAEFSRALEI 304



 Score = 43.5 bits (101), Expect = 0.29,   Method: Compositional matrix adjust.
 Identities = 23/68 (33%), Positives = 36/68 (52%), Gaps = 7/68 (10%)

Query: 459 KHAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHV 518
           ++A SDFT A         +D +  ++YY RG  Y   G+YE A+ +  K I+LNP++  
Sbjct: 88  ENAISDFTSAV-------NLDTDFVEAYYNRGLEYARIGEYELAIADFSKAISLNPSYAA 140

Query: 519 ARAQRHFV 526
           A   R  +
Sbjct: 141 AYNNRGVI 148


>gi|257059198|ref|YP_003137086.1| peptidase S1 and S6 chymotrypsin/Hap [Cyanothece sp. PCC 8802]
 gi|256589364|gb|ACV00251.1| peptidase S1 and S6 chymotrypsin/Hap [Cyanothece sp. PCC 8802]
          Length = 810

 Score = 94.7 bits (234), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 99/392 (25%), Positives = 176/392 (44%), Gaps = 44/392 (11%)

Query: 147 LHAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHV 206
           L+      +A A   +A +++PN AD+Y   G      G+ EEA+    K I LNPNF  
Sbjct: 73  LYYQGKLDEAIAAYQKAIQLNPNDADAYNNLGNALYYQGKLEEAIAAYQKAIQLNPNF-- 130

Query: 207 ARAQRHFVVHKMIVPGDRERVEQSLKEFRNFVDTHSNVVEACTLFAQVLVDQEDFDGAEE 266
             AQ +  +   +   D+ ++E+++  ++  +  + N  +A       L DQ   + A  
Sbjct: 131 --AQAYNNLGNAL--SDQGKLEEAIAAYQKAIQLNPNFTQAYYNLGIALSDQGKLEEAIA 186

Query: 267 YFNRSIRVDPENASLYVHRAMLMLQARGNVDEAIKLIEKAISIDKSCMFAYETLGTIEVQ 326
            + ++I+++P  A  Y +  + +   +G +DEAI   +KAI +D +   AY  LG    +
Sbjct: 187 AYQKAIQLNPNYADAYYNLGVALFD-QGKLDEAIAAYQKAIQLDPNDANAYNNLGAALYK 245

Query: 327 RGRLEEAVKCFNKALPLARDEAELSHIYSL-------RDAAIAQMKVCERYNIKKKVS-- 377
           +G+LEEA+  + KA+ L  + AE  +   +       RD AIA  +   + N    ++  
Sbjct: 246 QGKLEEAIAAYQKAIQLNPNLAEAYNNLGVALSDQGKRDEAIAAYQKAIQLNPNFALAYN 305

Query: 378 ----PRSQNITKNEKLAI--KQLRENNDIIIRPADKGGKTVVMDKADYTQKMTSILNSND 431
                 S    ++E +A   K ++ N +  +  A  G    + D+    + + +   +  
Sbjct: 306 GLGNALSDQGKRDEAIAAYQKAIQLNPNFAL--AYNGLGNALSDQGKRDEAIAAYQKA-- 361

Query: 432 YEIIPGDPTKTIEESEKYGN----LENESGQKHAASDFTKAFADLDEAEKVDPNVADSYY 487
              I  DP     ++  Y N    L N+  +  A + + KA        +++PN A +Y 
Sbjct: 362 ---IQLDPN----DANAYNNLGLALRNQGKRDEAITAYQKAI-------QLNPNFALAYN 407

Query: 488 QRGQIYCLFGQYEEALRNLDKTIALNPNFHVA 519
             G      G+ EEA+    K I LNPNF +A
Sbjct: 408 NLGNALYSQGKREEAIAAYQKAIQLNPNFALA 439



 Score = 81.6 bits (200), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 106/411 (25%), Positives = 179/411 (43%), Gaps = 51/411 (12%)

Query: 117 AIEDLTQLVEDTSVDPK-IKVNAHIKRAVVHLHAA-SDFTK---AFADLDEAEKVDPNVA 171
           A+ D  +L E  +   K I++N +  +A  +L  A SD  K   A A   +A +++PN A
Sbjct: 140 ALSDQGKLEEAIAAYQKAIQLNPNFTQAYYNLGIALSDQGKLEEAIAAYQKAIQLNPNYA 199

Query: 172 DSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQRHFVVHKMIVPGDRERVEQSL 231
           D+YY  G      G+ +EA+    K I L+PN   A       ++K      + ++E+++
Sbjct: 200 DAYYNLGVALFDQGKLDEAIAAYQKAIQLDPNDANAYNNLGAALYK------QGKLEEAI 253

Query: 232 KEFRNFVDTHSNVVEACTLFAQVLVDQEDFDGAEEYFNRSIRVDPENASLYVHRAMLMLQ 291
             ++  +  + N+ EA       L DQ   D A   + ++I+++P N +L  +     L 
Sbjct: 254 AAYQKAIQLNPNLAEAYNNLGVALSDQGKRDEAIAAYQKAIQLNP-NFALAYNGLGNALS 312

Query: 292 ARGNVDEAIKLIEKAISIDKSCMFAYETLGTIEVQRGRLEEAVKCFNKALPLARDEAELS 351
            +G  DEAI   +KAI ++ +   AY  LG     +G+ +EA+  + KA+ L  ++A   
Sbjct: 313 DQGKRDEAIAAYQKAIQLNPNFALAYNGLGNALSDQGKRDEAIAAYQKAIQLDPNDAN-- 370

Query: 352 HIYSLRDAAIAQMKVCERYNIKKKVSPRSQNITKNEKLAIKQLRENNDIIIRPADKGGKT 411
              +  +  +A     +R    + ++   + I  N   A   L  NN             
Sbjct: 371 ---AYNNLGLALRNQGKR---DEAITAYQKAIQLNPNFA---LAYNN------------- 408

Query: 412 VVMDKADYTQKMTSILNSNDYEIIPGDPTKTIEESEKYGNLENESGQKHAASDFTK---A 468
             +  A Y+Q       +   + I  +P   +     Y NL N      A SD  K   A
Sbjct: 409 --LGNALYSQGKREEAIAAYQKAIQLNPNFAL----AYNNLGN------ALSDQGKRDEA 456

Query: 469 FADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVA 519
            A   +A +++PN A +Y   G      G+  EA+    K I LNPNF +A
Sbjct: 457 IAAYQKAIQLNPNFALAYNNLGNALSDQGKLNEAIATYQKAIQLNPNFALA 507



 Score = 75.9 bits (185), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 63/217 (29%), Positives = 106/217 (48%), Gaps = 11/217 (5%)

Query: 134 IKVNAHIKRAVVHL-HAASDFTK---AFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEE 189
           I++N +   A   L +A SD  K   A A   +A ++DPN A++Y   G      G+ +E
Sbjct: 328 IQLNPNFALAYNGLGNALSDQGKRDEAIAAYQKAIQLDPNDANAYNNLGLALRNQGKRDE 387

Query: 190 ALRNLDKTIALNPNFHVARAQRHFVVHKMIVPGDRERVEQSLKEFRNFVDTHSNVVEACT 249
           A+    K I LNPNF +A    + + + +   G RE   +++  ++  +  + N   A  
Sbjct: 388 AITAYQKAIQLNPNFALAY---NNLGNALYSQGKRE---EAIAAYQKAIQLNPNFALAYN 441

Query: 250 LFAQVLVDQEDFDGAEEYFNRSIRVDPENASLYVHRAMLMLQARGNVDEAIKLIEKAISI 309
                L DQ   D A   + ++I+++P N +L  +     L  +G ++EAI   +KAI +
Sbjct: 442 NLGNALSDQGKRDEAIAAYQKAIQLNP-NFALAYNNLGNALSDQGKLNEAIATYQKAIQL 500

Query: 310 DKSCMFAYETLGTIEVQRGRLEEAVKCFNKALPLARD 346
           + +   AY  LG     +G+L EA+  + KAL L  D
Sbjct: 501 NPNFALAYNNLGNALKDQGKLNEAIAAYQKALSLPED 537



 Score = 66.6 bits (161), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 87/354 (24%), Positives = 148/354 (41%), Gaps = 52/354 (14%)

Query: 172 DSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQRHFVVHKMIVPGDRERVEQSL 231
           D  +Q+G+     G+Y EA     + I L+PN   A       ++       + ++++++
Sbjct: 30  DQLFQQGRTAGKMGKYTEAEAIFRRVIELDPNLADAYNNLGNALYY------QGKLDEAI 83

Query: 232 KEFRNFVDTHSNVVEACTLFAQVLVDQEDFDGAEEYFNRSIRVDPENASLYVHRAMLMLQ 291
             ++  +  + N  +A       L  Q   + A   + ++I+++P  A  Y +     L 
Sbjct: 84  AAYQKAIQLNPNDADAYNNLGNALYYQGKLEEAIAAYQKAIQLNPNFAQAYNNLGN-ALS 142

Query: 292 ARGNVDEAIKLIEKAISIDKSCMFAYETLGTIEVQRGRLEEAVKCFNKALPLARDEAELS 351
            +G ++EAI   +KAI ++ +   AY  LG     +G+LEEA+  + KA+ L  + A+  
Sbjct: 143 DQGKLEEAIAAYQKAIQLNPNFTQAYYNLGIALSDQGKLEEAIAAYQKAIQLNPNYAD-- 200

Query: 352 HIYSLRDAAIAQMKVCE---RYNIKKKVSPRSQNITKNEKLAIKQLRENNDIIIRPADKG 408
             Y+L  A   Q K+ E    Y    ++ P   N   N   A+               K 
Sbjct: 201 AYYNLGVALFDQGKLDEAIAAYQKAIQLDPNDANAYNNLGAALY--------------KQ 246

Query: 409 GKTVVMDKADYTQKMTSILNSNDYEIIPGDPTKTIEESEKYGNLENESGQKHAASDFTK- 467
           GK   +++A    +    LN N               +E Y NL        A SD  K 
Sbjct: 247 GK---LEEAIAAYQKAIQLNPN--------------LAEAYNNL------GVALSDQGKR 283

Query: 468 --AFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVA 519
             A A   +A +++PN A +Y   G      G+ +EA+    K I LNPNF +A
Sbjct: 284 DEAIAAYQKAIQLNPNFALAYNGLGNALSDQGKRDEAIAAYQKAIQLNPNFALA 337



 Score = 48.5 bits (114), Expect = 0.008,   Method: Compositional matrix adjust.
 Identities = 41/177 (23%), Positives = 77/177 (43%), Gaps = 13/177 (7%)

Query: 147 LHAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHV 206
           L++     +A A   +A +++PN A +Y   G      G+ +EA+    K I LNPNF +
Sbjct: 413 LYSQGKREEAIAAYQKAIQLNPNFALAYNNLGNALSDQGKRDEAIAAYQKAIQLNPNFAL 472

Query: 207 ARAQRHFVVHKMIVPGDRERVEQSLKEFRNFVDTHSNVVEACTLFAQVLVDQEDFDGAEE 266
           A       +       D+ ++ +++  ++  +  + N   A       L DQ   + A  
Sbjct: 473 AYNNLGNALS------DQGKLNEAIATYQKAIQLNPNFALAYNNLGNALKDQGKLNEAIA 526

Query: 267 YFNRSI------RVDPENASLYVHRAM-LMLQARGNVDEAIKLIEKAISIDKSCMFA 316
            + +++       V P  A    H  + L+ Q  G ++EA++  E A+ ID    +A
Sbjct: 527 AYQKALSLPEDTSVTPTTAHTLAHNNLGLVYQPEGKLEEALREYEAALKIDPKFEYA 583


>gi|218246150|ref|YP_002371521.1| hypothetical protein PCC8801_1300 [Cyanothece sp. PCC 8801]
 gi|218166628|gb|ACK65365.1| TPR repeat-containing protein [Cyanothece sp. PCC 8801]
          Length = 878

 Score = 94.4 bits (233), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 97/387 (25%), Positives = 177/387 (45%), Gaps = 50/387 (12%)

Query: 155 KAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQRHFV 214
           +A A   +A +++PN AD+YY  G      G+ EEA+    K I LNPNF     Q ++ 
Sbjct: 115 EAIAAYQKAIQLNPNYADAYYNLGIALSDQGKLEEAIAAYQKAIQLNPNF----TQAYYN 170

Query: 215 VHKMIVPGDRERVEQSLKEFRNFVDTHSNVVEACTLFAQVLVDQEDFDGAEEYFNRSIRV 274
           +   I   D+ ++E+++  ++  +  + N  +A       L DQ   D A   + ++I++
Sbjct: 171 LG--IALSDQGKLEEAIAAYQKAIQLNPNYADAYYNLGNALFDQGKLDEAIAAYQKAIQL 228

Query: 275 DPENASLYVHRAMLMLQARGNVDEAIKLIEKAISIDKSCMFAYETLGTIEVQRGRLEEAV 334
           DP +A+ Y +    + + +G ++EAI   +KAI ++ +   AY  LG     +G+ +EA+
Sbjct: 229 DPNDANAYNNLGAALYK-QGKLEEAIAAYQKAIQLNPNLAEAYNNLGVALSDQGKRDEAI 287

Query: 335 KCFNKALPLARDEAELSHIYSL-------RDAAIAQMKVCERYNIKKKVSPRSQNIT--- 384
             + KA+ L  + AE  +   +       RD AIA  +   + N    ++  +  +    
Sbjct: 288 AAYQKAIQLNPNLAEAYNNLGVALSDQGKRDEAIAAYQKAIQLNPNFALAYNNLGVALSD 347

Query: 385 ---KNEKLAIK----QLREN-----NDIIIRPADKGGKTVVMDKADYTQKMTSILNSNDY 432
              ++E +A      QL  N     N++ +  +D+G +   +  A Y QK   +      
Sbjct: 348 QGKRDEAIAAYQKAIQLNPNFALAYNNLGVALSDQGKRDEAI--AAY-QKAIQL------ 398

Query: 433 EIIPGDPTKTIEESEKYGNLENESGQKHAASDFTKAFADLDEAEKVDPNVADSYYQRGQI 492
                +P   +  +     L N+  +  A + + KA        ++DPN A++Y   G  
Sbjct: 399 -----NPNFALAYNNLGVALRNQGKRDEAIAAYQKAI-------QLDPNDANAYNNLGLA 446

Query: 493 YCLFGQYEEALRNLDKTIALNPNFHVA 519
               G+ +EA+    K I LNPNF +A
Sbjct: 447 LRNQGKRDEAITAYQKAIQLNPNFALA 473



 Score = 89.0 bits (219), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 97/376 (25%), Positives = 168/376 (44%), Gaps = 46/376 (12%)

Query: 147 LHAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHV 206
           L+      +A A   +A +++PN AD+Y   G      G+ EEA+    K I LNPN+  
Sbjct: 73  LYYQGKLDEAIAAYQKAIQLNPNDADAYNNLGNALSDQGKLEEAIAAYQKAIQLNPNY-- 130

Query: 207 ARAQRHFVVHKMIVPGDRERVEQSLKEFRNFVDTHSNVVEACTLFAQVLVDQEDFDGAEE 266
             A  ++ +   I   D+ ++E+++  ++  +  + N  +A       L DQ   + A  
Sbjct: 131 --ADAYYNLG--IALSDQGKLEEAIAAYQKAIQLNPNFTQAYYNLGIALSDQGKLEEAIA 186

Query: 267 YFNRSIRVDPENASLYVHRAMLMLQARGNVDEAIKLIEKAISIDKSCMFAYETLGTIEVQ 326
            + ++I+++P  A  Y +    +   +G +DEAI   +KAI +D +   AY  LG    +
Sbjct: 187 AYQKAIQLNPNYADAYYNLGNALFD-QGKLDEAIAAYQKAIQLDPNDANAYNNLGAALYK 245

Query: 327 RGRLEEAVKCFNKALPLARDEAELSHIYSLRDAAIAQMKVCERYNIKKKVSPRSQNITKN 386
           +G+LEEA+  + KA+ L  + AE     +  +  +A     +R    + ++   + I  N
Sbjct: 246 QGKLEEAIAAYQKAIQLNPNLAE-----AYNNLGVALSDQGKR---DEAIAAYQKAIQLN 297

Query: 387 EKLAIKQLRENNDIIIRPADKGGKTVVMDKADYTQKMTSILNSNDYEIIPGDPTKTIEES 446
             LA       N++ +  +D+G +    D+A    +    LN N               +
Sbjct: 298 PNLA----EAYNNLGVALSDQGKR----DEAIAAYQKAIQLNPN--------------FA 335

Query: 447 EKYGNLENESGQKHAASDFTK---AFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEAL 503
             Y NL        A SD  K   A A   +A +++PN A +Y   G      G+ +EA+
Sbjct: 336 LAYNNL------GVALSDQGKRDEAIAAYQKAIQLNPNFALAYNNLGVALSDQGKRDEAI 389

Query: 504 RNLDKTIALNPNFHVA 519
               K I LNPNF +A
Sbjct: 390 AAYQKAIQLNPNFALA 405



 Score = 84.7 bits (208), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 108/418 (25%), Positives = 180/418 (43%), Gaps = 31/418 (7%)

Query: 117 AIEDLTQLVEDTSVDPK-IKVNAHIKRAVVHLHAA----SDFTKAFADLDEAEKVDPNVA 171
           A+ D  +L E  +   K I++N +   A  +L  A        +A A   +A ++DPN A
Sbjct: 174 ALSDQGKLEEAIAAYQKAIQLNPNYADAYYNLGNALFDQGKLDEAIAAYQKAIQLDPNDA 233

Query: 172 DSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQRHFVVHKMIVPGDRERVEQSL 231
           ++Y   G      G+ EEA+    K I LNPN  +A A  +  V       D+ + ++++
Sbjct: 234 NAYNNLGAALYKQGKLEEAIAAYQKAIQLNPN--LAEAYNNLGV----ALSDQGKRDEAI 287

Query: 232 KEFRNFVDTHSNVVEACTLFAQVLVDQEDFDGAEEYFNRSIRVDPENASLYVHRAMLMLQ 291
             ++  +  + N+ EA       L DQ   D A   + ++I+++P N +L  +   + L 
Sbjct: 288 AAYQKAIQLNPNLAEAYNNLGVALSDQGKRDEAIAAYQKAIQLNP-NFALAYNNLGVALS 346

Query: 292 ARGNVDEAIKLIEKAISIDKSCMFAYETLGTIEVQRGRLEEAVKCFNKALPLARDEAELS 351
            +G  DEAI   +KAI ++ +   AY  LG     +G+ +EA+  + KA+ L  + A   
Sbjct: 347 DQGKRDEAIAAYQKAIQLNPNFALAYNNLGVALSDQGKRDEAIAAYQKAIQLNPNFALAY 406

Query: 352 HIYSL-------RDAAIAQMKVCERYNIKKKVSPRSQNITKNEKLAIKQLRENNDIIIRP 404
           +   +       RD AIA       Y    ++ P   N   N  LA++  +   D  I  
Sbjct: 407 NNLGVALRNQGKRDEAIA------AYQKAIQLDPNDANAYNNLGLALRN-QGKRDEAITA 459

Query: 405 ADKGGKTVVMDKADYTQKMTSILNSNDYEIIPGDPTKTIEESEKYGNLENESGQKHAASD 464
             K  +        Y     ++ +    E       K I+ +  +    N  G  +A SD
Sbjct: 460 YQKAIQLNPNFALAYNNLGNALYSQGKREEAIAAYQKAIQLNPNFALAYNNLG--NALSD 517

Query: 465 FTK---AFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVA 519
             K   A A   +A +++PN A +Y   G      G+  EA+    K I LNPNF +A
Sbjct: 518 QGKRDEAIAAYQKAIQLNPNFALAYNNLGNALSDQGKLNEAIATYQKAIQLNPNFALA 575



 Score = 83.6 bits (205), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 94/370 (25%), Positives = 165/370 (44%), Gaps = 46/370 (12%)

Query: 153 FTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQRH 212
           +T+A A      ++DPN+AD+Y   G      G+ +EA+    K I LNPN   A     
Sbjct: 45  YTEAEAIFRRVIELDPNLADAYNNLGNALYYQGKLDEAIAAYQKAIQLNPNDADAYNNLG 104

Query: 213 FVVHKMIVPGDRERVEQSLKEFRNFVDTHSNVVEACTLFAQVLVDQEDFDGAEEYFNRSI 272
             +       D+ ++E+++  ++  +  + N  +A       L DQ   + A   + ++I
Sbjct: 105 NALS------DQGKLEEAIAAYQKAIQLNPNYADAYYNLGIALSDQGKLEEAIAAYQKAI 158

Query: 273 RVDPENASLYVHRAMLMLQARGNVDEAIKLIEKAISIDKSCMFAYETLGTIEVQRGRLEE 332
           +++P     Y +   + L  +G ++EAI   +KAI ++ +   AY  LG     +G+L+E
Sbjct: 159 QLNPNFTQAYYNLG-IALSDQGKLEEAIAAYQKAIQLNPNYADAYYNLGNALFDQGKLDE 217

Query: 333 AVKCFNKALPLARDEAELSHIYSLRDAAIAQMKVCERYNIKKKVSPRSQNITKNEKLAIK 392
           A+  + KA+ L  ++A   + Y+   AA+ +    E     + ++   + I  N  LA  
Sbjct: 218 AIAAYQKAIQLDPNDA---NAYNNLGAALYKQGKLE-----EAIAAYQKAIQLNPNLA-- 267

Query: 393 QLRENNDIIIRPADKGGKTVVMDKADYTQKMTSILNSNDYEIIPGDPTKTIEESEKYGNL 452
                N++ +  +D+G +    D+A    +    LN N               +E Y NL
Sbjct: 268 --EAYNNLGVALSDQGKR----DEAIAAYQKAIQLNPN--------------LAEAYNNL 307

Query: 453 ENESGQKHAASDFTK---AFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKT 509
                   A SD  K   A A   +A +++PN A +Y   G      G+ +EA+    K 
Sbjct: 308 ------GVALSDQGKRDEAIAAYQKAIQLNPNFALAYNNLGVALSDQGKRDEAIAAYQKA 361

Query: 510 IALNPNFHVA 519
           I LNPNF +A
Sbjct: 362 IQLNPNFALA 371



 Score = 76.3 bits (186), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 88/354 (24%), Positives = 153/354 (43%), Gaps = 52/354 (14%)

Query: 172 DSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQRHFVVHKMIVPGDRERVEQSL 231
           D  +Q+G+     G+Y EA     + I L+PN   A       ++       + ++++++
Sbjct: 30  DQLFQQGRTAGKMGKYTEAEAIFRRVIELDPNLADAYNNLGNALYY------QGKLDEAI 83

Query: 232 KEFRNFVDTHSNVVEACTLFAQVLVDQEDFDGAEEYFNRSIRVDPENASLYVHRAMLMLQ 291
             ++  +  + N  +A       L DQ   + A   + ++I+++P  A  Y +   + L 
Sbjct: 84  AAYQKAIQLNPNDADAYNNLGNALSDQGKLEEAIAAYQKAIQLNPNYADAYYNLG-IALS 142

Query: 292 ARGNVDEAIKLIEKAISIDKSCMFAYETLGTIEVQRGRLEEAVKCFNKALPLARDEAELS 351
            +G ++EAI   +KAI ++ +   AY  LG     +G+LEEA+  + KA+ L  + A+  
Sbjct: 143 DQGKLEEAIAAYQKAIQLNPNFTQAYYNLGIALSDQGKLEEAIAAYQKAIQLNPNYAD-- 200

Query: 352 HIYSLRDAAIAQMKVCE---RYNIKKKVSPRSQNITKNEKLAIKQLRENNDIIIRPADKG 408
             Y+L +A   Q K+ E    Y    ++ P   N   N   A+               K 
Sbjct: 201 AYYNLGNALFDQGKLDEAIAAYQKAIQLDPNDANAYNNLGAALY--------------KQ 246

Query: 409 GKTVVMDKADYTQKMTSILNSNDYEIIPGDPTKTIEESEKYGNLENESGQKHAASDFTK- 467
           GK   +++A    +    LN N               +E Y NL        A SD  K 
Sbjct: 247 GK---LEEAIAAYQKAIQLNPN--------------LAEAYNNL------GVALSDQGKR 283

Query: 468 --AFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVA 519
             A A   +A +++PN+A++Y   G      G+ +EA+    K I LNPNF +A
Sbjct: 284 DEAIAAYQKAIQLNPNLAEAYNNLGVALSDQGKRDEAIAAYQKAIQLNPNFALA 337



 Score = 75.1 bits (183), Expect = 9e-11,   Method: Compositional matrix adjust.
 Identities = 55/192 (28%), Positives = 95/192 (49%), Gaps = 7/192 (3%)

Query: 155 KAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQRHFV 214
           +A A   +A ++DPN A++Y   G      G+ +EA+    K I LNPNF +A    + +
Sbjct: 421 EAIAAYQKAIQLDPNDANAYNNLGLALRNQGKRDEAITAYQKAIQLNPNFALAY---NNL 477

Query: 215 VHKMIVPGDRERVEQSLKEFRNFVDTHSNVVEACTLFAQVLVDQEDFDGAEEYFNRSIRV 274
            + +   G RE   +++  ++  +  + N   A       L DQ   D A   + ++I++
Sbjct: 478 GNALYSQGKRE---EAIAAYQKAIQLNPNFALAYNNLGNALSDQGKRDEAIAAYQKAIQL 534

Query: 275 DPENASLYVHRAMLMLQARGNVDEAIKLIEKAISIDKSCMFAYETLGTIEVQRGRLEEAV 334
           +P N +L  +     L  +G ++EAI   +KAI ++ +   AY  LG     +G+L EA+
Sbjct: 535 NP-NFALAYNNLGNALSDQGKLNEAIATYQKAIQLNPNFALAYNNLGNALKDQGKLNEAI 593

Query: 335 KCFNKALPLARD 346
             + KAL L  D
Sbjct: 594 AAYQKALSLPED 605



 Score = 48.9 bits (115), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 41/177 (23%), Positives = 78/177 (44%), Gaps = 13/177 (7%)

Query: 147 LHAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHV 206
           L++     +A A   +A +++PN A +Y   G      G+ +EA+    K I LNPNF +
Sbjct: 481 LYSQGKREEAIAAYQKAIQLNPNFALAYNNLGNALSDQGKRDEAIAAYQKAIQLNPNFAL 540

Query: 207 ARAQRHFVVHKMIVPGDRERVEQSLKEFRNFVDTHSNVVEACTLFAQVLVDQEDFDGAEE 266
           A       +       D+ ++ +++  ++  +  + N   A       L DQ   + A  
Sbjct: 541 AYNNLGNALS------DQGKLNEAIATYQKAIQLNPNFALAYNNLGNALKDQGKLNEAIA 594

Query: 267 YFNRSI------RVDPENASLYVHRAM-LMLQARGNVDEAIKLIEKAISIDKSCMFA 316
            + +++       V P  A    H  + L+ Q +G ++EA++  E A+ ID    +A
Sbjct: 595 AYQKALSLPEDTSVTPTTAHTLAHNNLGLVYQPQGKLEEALREYEAALKIDPKFEYA 651


>gi|440680211|ref|YP_007155006.1| Tetratricopeptide TPR_1 repeat-containing protein [Anabaena
           cylindrica PCC 7122]
 gi|428677330|gb|AFZ56096.1| Tetratricopeptide TPR_1 repeat-containing protein [Anabaena
           cylindrica PCC 7122]
          Length = 560

 Score = 94.4 bits (233), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 98/426 (23%), Positives = 181/426 (42%), Gaps = 60/426 (14%)

Query: 105 ATVYIFTSQSTKAIEDLTQLVED----TSVDPKIKVNAHIKRAVVHLHAASDFTKAFADL 160
           A  Y     +   + D+   +ED     S++P   V A++ R    L +  D      D 
Sbjct: 132 AEAYCNRGNARSKLGDMKGAMEDYNQALSINPN-SVEAYLSRGFARLQSG-DMNGGMEDY 189

Query: 161 DEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQRHFVVHKMIV 220
           ++A  ++PN+A++Y  RG   C  G  + A+ + ++ + +NP    A   R    +    
Sbjct: 190 NQAISINPNLAEAYCNRGNARCEAGDVQGAIEDCNQALRINPKLAEAYCNRS---NARCE 246

Query: 221 PGDRERVEQSLKEFRNFVDTHSNVVEACTLFAQVLVDQEDFDGAEEYFNRSIRVDPENAS 280
            GD   VE ++++    +  +  + EA         +  D   A E +N+ +R++P  A 
Sbjct: 247 SGD---VEGAIEDCNQALRINPKLAEAYLNRGNARRESGDIKRAIEDYNQGLRINPNLAQ 303

Query: 281 LYVHRAMLMLQARGNVDEAIKLIEKAISIDKSCMFAYETLGTIEVQRGRLEEAVKCFNKA 340
            Y +R     ++ G+   AI+   +AI I+ +   AY+  G    + G  + A++ FN+A
Sbjct: 304 AYRNRGFARCES-GDFKGAIEDFNQAIRINPNLAQAYQNRGFARCESGDFKGAIEDFNQA 362

Query: 341 LPLARDEAE------LSHIYSL-RDAAIAQMKVCERYNIKKKVSPRSQNITKNEKLAIKQ 393
           L +  + AE      L+H YS  R A I      E +N   +++P       N  +    
Sbjct: 363 LRINPNYAEAYYNRGLAHNYSGDRQAEI------EDFNQALRINPNLAEAYLNRGVT--- 413

Query: 394 LRENNDIIIRPADKGGKTVVMDKADYTQKMTSILNSNDYEIIPGDPTKTIEESEKYGNLE 453
            RE+ D+         K  +    DY Q +   +N N               +E Y   +
Sbjct: 414 RRESGDV---------KGAI---EDYNQALH--INPN--------------LAEAY---Q 442

Query: 454 NESGQKHAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALN 513
           N    +  + DF  A  D ++  +++PN A++Y  RG      G  + A+ + ++ + +N
Sbjct: 443 NRGFARCKSGDFKGAIEDCNQVLRINPNFAEAYLNRGNARLESGDMKGAIEDCNQALRIN 502

Query: 514 PNFHVA 519
           PN  +A
Sbjct: 503 PNLAIA 508



 Score = 88.6 bits (218), Expect = 8e-15,   Method: Compositional matrix adjust.
 Identities = 91/391 (23%), Positives = 170/391 (43%), Gaps = 40/391 (10%)

Query: 150 ASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARA 209
           + D   A     +A  ++PN A++Y  RG      G  + A+ + ++ +++NPN   A  
Sbjct: 111 SGDMKAAMEYYSQALSINPNFAEAYCNRGNARSKLGDMKGAMEDYNQALSINPNSVEAYL 170

Query: 210 QRHFVVHKMIVPGDRERVEQSLKEFRNFVDTHSNVVEACTLFAQVLVDQEDFDGAEEYFN 269
            R F     +  GD   +   ++++   +  + N+ EA         +  D  GA E  N
Sbjct: 171 SRGFA---RLQSGD---MNGGMEDYNQAISINPNLAEAYCNRGNARCEAGDVQGAIEDCN 224

Query: 270 RSIRVDPENASLYVHRAMLMLQARGNVDEAIKLIEKAISIDKSCMFAYETLGTIEVQRGR 329
           +++R++P+ A  Y +R+    ++ G+V+ AI+   +A+ I+     AY   G    + G 
Sbjct: 225 QALRINPKLAEAYCNRSNARCES-GDVEGAIEDCNQALRINPKLAEAYLNRGNARRESGD 283

Query: 330 LEEAVKCFNKALPLARDEAELSHIYSLRDAAIAQMKVCERYNIKKKVSPRSQNITKNEKL 389
           ++ A++ +N+ L   R    L+  Y  R  A      CE  + K  +   +Q I  N  L
Sbjct: 284 IKRAIEDYNQGL---RINPNLAQAYRNRGFA-----RCESGDFKGAIEDFNQAIRINPNL 335

Query: 390 AIKQLRENNDII-IRPADKGGKTVVMDKA-----DYTQKMTSILNSNDYEIIPGDPTKTI 443
           A  Q  +N         D  G     ++A     +Y +   +   +++Y    GD    I
Sbjct: 336 A--QAYQNRGFARCESGDFKGAIEDFNQALRINPNYAEAYYNRGLAHNYS---GDRQAEI 390

Query: 444 EE-----------SEKYGNLENESGQKHAASDFTKAFADLDEAEKVDPNVADSYYQRGQI 492
           E+           +E Y    N    +  + D   A  D ++A  ++PN+A++Y  RG  
Sbjct: 391 EDFNQALRINPNLAEAY---LNRGVTRRESGDVKGAIEDYNQALHINPNLAEAYQNRGFA 447

Query: 493 YCLFGQYEEALRNLDKTIALNPNFHVARAQR 523
            C  G ++ A+ + ++ + +NPNF  A   R
Sbjct: 448 RCKSGDFKGAIEDCNQVLRINPNFAEAYLNR 478



 Score = 78.2 bits (191), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 72/293 (24%), Positives = 131/293 (44%), Gaps = 18/293 (6%)

Query: 73  EHEDYLTAIRHCTEEIESTSSNHTKALARLLRATVYIFTSQSTKAIEDLTQLVEDTSVDP 132
           E  D   AI  C + +     N   A A L R      +    +AIED  Q +    ++P
Sbjct: 246 ESGDVEGAIEDCNQALRI---NPKLAEAYLNRGNARRESGDIKRAIEDYNQGLR---INP 299

Query: 133 KIKVNAHIKRAVVHLHAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALR 192
            +   A+  R      +  DF  A  D ++A +++PN+A +Y  RG   C  G ++ A+ 
Sbjct: 300 NL-AQAYRNRGFARCESG-DFKGAIEDFNQAIRINPNLAQAYQNRGFARCESGDFKGAIE 357

Query: 193 NLDKTIALNPNFHVARAQRHFVVHKMIVPGDRERVEQSLKEFRNFVDTHSNVVEACTLFA 252
           + ++ + +NPN+  A   R    +     GDR   +  +++F   +  + N+ EA     
Sbjct: 358 DFNQALRINPNYAEAYYNRGLAHN---YSGDR---QAEIEDFNQALRINPNLAEAYLNRG 411

Query: 253 QVLVDQEDFDGAEEYFNRSIRVDPENASLYVHRAMLMLQARGNVDEAIKLIEKAISIDKS 312
               +  D  GA E +N+++ ++P  A  Y +R     ++ G+   AI+   + + I+ +
Sbjct: 412 VTRRESGDVKGAIEDYNQALHINPNLAEAYQNRGFARCKS-GDFKGAIEDCNQVLRINPN 470

Query: 313 CMFAYETLGTIEVQRGRLEEAVKCFNKALPLARDEAELSHIYSLRDAAIAQMK 365
              AY   G   ++ G ++ A++  N+AL   R    L+  Y  R AA  Q +
Sbjct: 471 FAEAYLNRGNARLESGDMKGAIEDCNQAL---RINPNLAIAYFNRGAARLQSR 520


>gi|307591404|ref|YP_003900203.1| TPR repeat-containing protein [Cyanothece sp. PCC 7822]
 gi|306986258|gb|ADN18137.1| TPR repeat-containing protein [Cyanothece sp. PCC 7822]
          Length = 535

 Score = 94.4 bits (233), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 98/436 (22%), Positives = 193/436 (44%), Gaps = 37/436 (8%)

Query: 104 RATVYIFTSQSTKAIEDLTQLVEDTSVDPKIKVNAHIKRAVVHLHAASDFTKAFADLDEA 163
           R  ++ F  +  +A+ D  + ++    D     NA   RA V+      + ++ +DL + 
Sbjct: 84  RGMIHYFFKEYEQALSDFNKAIDIYPQDE----NAFYNRAFVYWEL-EQYDQSLSDLAKT 138

Query: 164 EKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQRHFVVHKMIVPGD 223
            +++P   ++Y QRG +Y    QY++AL +L+K I +NP F      R  V  K+     
Sbjct: 139 IEINPQSVNAYNQRGLLYWELEQYDQALSDLNKAIDINPLFAYPYGNRALVYWKL----- 193

Query: 224 RERVEQSLKEFRNFVDTHSNVVEACTLFAQVLVDQEDFDGAEEYFNRSIRVDPENASLYV 283
            ++ +Q+L  +   ++  S    A      +    E++D A   +++ I +DP+    Y 
Sbjct: 194 -KKYDQALFNYNKLIELDSQCTNAYHYRDDLYSKLEEYDKAISDYSKVIDLDPQCTEAYE 252

Query: 284 HRAMLMLQARGNVDEAIKLIEKAISIDKSCMFAYETLGTIEVQRGRLEEAVKCFNKALPL 343
            R +L  + +   D+ +    KAI ++      Y   G+   +    ++A+  + KA+  
Sbjct: 253 KRGLLYYKLQ-QYDKVLSDYSKAIELNPQDDAEYIARGSFYFELKEYDKALLDYYKAIEF 311

Query: 344 ARDEAELSHIYSLRDAAIAQMKVCER----YNIKKKVSP-------RSQNITKNEKLAIK 392
            + E+E+   Y +R     ++K  E+    YN   +++P       +  +I K  K   +
Sbjct: 312 -KPESEVG--YYIRGDLYLELKEYEKALFDYNRAIEINPLFIDPYCQRGHIYKALKKYTQ 368

Query: 393 QLRENNDII-IRPADKGGKTVVMDKADYTQKMTSILNSNDYEIIPGDPTKTIEESEKYGN 451
            L + N  I + PA         ++ D   ++       DY     D  K IE    + +
Sbjct: 369 ALSDYNKAIELYPA---SAEFYYNRGDLYFQLK------DYSKALSDYNKAIENDADFND 419

Query: 452 LENESGQKHA-ASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTI 510
             ++ G  +     + +A +D ++A +++P  AD YY RG IY    +YE+A+ +L + I
Sbjct: 420 AYSKRGNLYKDLKKYAQALSDYNKAIELNPQDADLYYNRGSIYLELKEYEKAVIDLSQAI 479

Query: 511 ALNPNFHVARAQRHFV 526
             N     A ++R  +
Sbjct: 480 KFNSESPEAYSKRGLL 495



 Score = 83.2 bits (204), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 96/438 (21%), Positives = 193/438 (44%), Gaps = 37/438 (8%)

Query: 115 TKAIEDLTQLVEDTSVDPKIKVNAHIKRAVVHLHAASDFTKAFADLDEAEKVDPNVADSY 174
           T AIEDL +++   S +P     +  K  +        +    ++L  A +++  +A++Y
Sbjct: 27  TGAIEDLPKVI---SFNPSYSEASQTKNTLDKDKDLKKYKNTLSNL--AIQINAKLAETY 81

Query: 175 YQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQRHFVVHKMIVPGDRERVEQSLKEF 234
            +RG I+  F +YE+AL + +K I + P    A   R FV  ++      E+ +QSL + 
Sbjct: 82  SKRGMIHYFFKEYEQALSDFNKAIDIYPQDENAFYNRAFVYWEL------EQYDQSLSDL 135

Query: 235 RNFVDTHSNVVEACTLFAQVLVDQEDFDGAEEYFNRSIRVDPENASLYVHRAMLMLQARG 294
              ++ +   V A      +  + E +D A    N++I ++P  A  Y +RA++  + + 
Sbjct: 136 AKTIEINPQSVNAYNQRGLLYWELEQYDQALSDLNKAIDINPLFAYPYGNRALVYWKLK- 194

Query: 295 NVDEAIKLIEKAISIDKSCMFAYETLGTIEVQRGRLEEAVKCFNKALPLARDEAELSHIY 354
             D+A+    K I +D  C  AY     +  +    ++A+  ++K + L   + + +  Y
Sbjct: 195 KYDQALFNYNKLIELDSQCTNAYHYRDDLYSKLEEYDKAISDYSKVIDL---DPQCTEAY 251

Query: 355 SLRDAAIAQM----KVCERYNIKKKVSPRSQNITKNEKLAIKQLRENNDIII-------- 402
             R     ++    KV   Y+   +++P+             +L+E +  ++        
Sbjct: 252 EKRGLLYYKLQQYDKVLSDYSKAIELNPQDDAEYIARGSFYFELKEYDKALLDYYKAIEF 311

Query: 403 RPADKGGKTVVMDKADYTQKMTSILNSNDYEIIPGDPTKTIEESEKYGNLENESGQKHAA 462
           +P  + G  +  D           L   +YE    D  + IE +  + +   + G  + A
Sbjct: 312 KPESEVGYYIRGD---------LYLELKEYEKALFDYNRAIEINPLFIDPYCQRGHIYKA 362

Query: 463 -SDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARA 521
              +T+A +D ++A ++ P  A+ YY RG +Y     Y +AL + +K I  + +F+ A +
Sbjct: 363 LKKYTQALSDYNKAIELYPASAEFYYNRGDLYFQLKDYSKALSDYNKAIENDADFNDAYS 422

Query: 522 QRHFVWTSTLAELMAFSD 539
           +R  ++        A SD
Sbjct: 423 KRGNLYKDLKKYAQALSD 440



 Score = 45.8 bits (107), Expect = 0.059,   Method: Compositional matrix adjust.
 Identities = 33/129 (25%), Positives = 64/129 (49%), Gaps = 8/129 (6%)

Query: 104 RATVYIFTSQSTKAIEDLTQLVEDTSVDPKIKVNAHIKRAVVHLHAASDFTKAFADLDEA 163
           R  +Y      +KA+ D  + +E+   D     +A+ KR  ++      + +A +D ++A
Sbjct: 390 RGDLYFQLKDYSKALSDYNKAIEN---DADFN-DAYSKRGNLY-KDLKKYAQALSDYNKA 444

Query: 164 EKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQRHFVVHKMIVPGD 223
            +++P  AD YY RG IY    +YE+A+ +L + I  N     A ++R  +  K    G+
Sbjct: 445 IELNPQDADLYYNRGSIYLELKEYEKAVIDLSQAIKFNSESPEAYSKRGLLCQK---AGN 501

Query: 224 RERVEQSLK 232
           +++    L+
Sbjct: 502 KQQARSDLQ 510


>gi|440682547|ref|YP_007157342.1| Tetratricopeptide TPR_1 repeat-containing protein [Anabaena
           cylindrica PCC 7122]
 gi|428679666|gb|AFZ58432.1| Tetratricopeptide TPR_1 repeat-containing protein [Anabaena
           cylindrica PCC 7122]
          Length = 1409

 Score = 94.0 bits (232), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 87/396 (21%), Positives = 165/396 (41%), Gaps = 25/396 (6%)

Query: 138 AHIKRAVVHLHAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYC-LFGQYEEALRNLDK 196
           A  KR V  +H   ++ KA A  D+A ++ PN  D++  RG + C  F QYE+A+ + DK
Sbjct: 384 AWCKRGVTLVHLG-EYQKAVASFDKALEIKPNDYDAWCNRGVVLCDHFRQYEQAVASYDK 442

Query: 197 TIALNPNFHVARAQRHFVVHKMIVPGDRERVEQSLKEFRNFVDTHSNVVEACTLFAQVLV 256
            + + P+ + A   R   +      G+    EQ++  +   +    +  +AC      L 
Sbjct: 443 ALQIKPDKYEAWNNRGVAL------GNLGEYEQAVASYDKALKIKPDDYQACFNRGVTLG 496

Query: 257 DQEDFDGAEEYFNRSIRVDPENASLYVHRAMLMLQARGNVDEAIKLIEKAISIDKSCMFA 316
              +++ A   +++ +   P+    + +R +L+    G  ++A+    KA+ I      A
Sbjct: 497 YLGEYEQAVASYDKVLEFKPDYYDAWYNRGILLCDNLGRYEQAVASFNKALEIKPDYYDA 556

Query: 317 YETLGTIEVQRGRLEEAVKCFNKALPLARDEAELSHIYSLRDAAIAQMKVCER----YNI 372
           +   G      G  E+AV  ++KAL +  D+ E    +  R   +  +   E+    Y+ 
Sbjct: 557 WCNRGVALDHLGEYEQAVASYDKALEIKPDDHE---TWCKRGVTLDHLGEYEQAVASYDK 613

Query: 373 KKKVSPRSQNITKNEKLAIKQLRENNDIIIRPADKGGKTVVMDKADYTQKMTS----ILN 428
             K  P          + +  L EN   +           +  K DY +   S    + N
Sbjct: 614 ALKFKPDYHKAWYGRGVTLDHLGENEQAVASY-----NKALEFKPDYHEVWNSRGNALNN 668

Query: 429 SNDYEIIPGDPTKTIE-ESEKYGNLENESGQKHAASDFTKAFADLDEAEKVDPNVADSYY 487
             +YE       K +E + + Y    N         ++ +A    D+A +  P+  +++ 
Sbjct: 669 LGEYEQAVASYDKALEIKPDYYDAWCNRGVALDHLGEYEQAVTSYDKALEFKPDKYEAWC 728

Query: 488 QRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQR 523
            RG + C  G+YE+A+ + DK + + P+ H     R
Sbjct: 729 NRGVVLCDLGEYEQAVASYDKALEIKPDLHEVWINR 764



 Score = 81.3 bits (199), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 74/385 (19%), Positives = 162/385 (42%), Gaps = 16/385 (4%)

Query: 145 VHLHAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNF 204
           V L+   ++ +A A  D+A +  P+  + +  RG      G+YE+A+ + DK + + P++
Sbjct: 186 VTLYHLGEYEQAVAFFDKALEFKPDYHEVWLIRGGALDYLGEYEQAVASYDKALEIKPDY 245

Query: 205 HVARAQRHFVVHKMIVPGDRERVEQSLKEFRNFVDTHSNVVEACTLFAQVLVDQEDFDGA 264
           H A  +R   +  +         EQ++  +   ++   +  E       +LV   ++  A
Sbjct: 246 HEAWCKRGVALANL------GEYEQAVASYDKALEIKPDYHEVGNNRGLLLVHLGEYQKA 299

Query: 265 EEYFNRSIRVDPENASLYVHRAMLMLQARGNVDEAIKLIEKAISIDKSCMFAYETLGTIE 324
              F++++ + P +   + +R +  L   G  ++A+    KA+ I      A    G   
Sbjct: 300 VASFDKALEIKPNDYDAWHYRGV-ALGYLGEYEQAVASYNKALEIKPEYHQALSNWGVTL 358

Query: 325 VQRGRLEEAVKCFNKALPLARDEAELSHIYSLRDAAIAQM----KVCERYNIKKKVSPRS 380
              G  ++AV  F+KAL +  D+ E    +  R   +  +    K    ++   ++ P  
Sbjct: 359 GNLGEYQKAVASFDKALEIKPDDHE---AWCKRGVTLVHLGEYQKAVASFDKALEIKPND 415

Query: 381 QNITKNEKLAIKQLRENNDIIIRPADKGGKTVVMDKADYTQKMTSILNSNDYEIIPGDPT 440
            +   N  + +       +  +   DK  +        +  +  ++ N  +YE       
Sbjct: 416 YDAWCNRGVVLCDHFRQYEQAVASYDKALQIKPDKYEAWNNRGVALGNLGEYEQAVASYD 475

Query: 441 KTIE-ESEKYGNLENESGQKHAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYC-LFGQ 498
           K ++ + + Y    N         ++ +A A  D+  +  P+  D++Y RG + C   G+
Sbjct: 476 KALKIKPDDYQACFNRGVTLGYLGEYEQAVASYDKVLEFKPDYYDAWYNRGILLCDNLGR 535

Query: 499 YEEALRNLDKTIALNPNFHVARAQR 523
           YE+A+ + +K + + P+++ A   R
Sbjct: 536 YEQAVASFNKALEIKPDYYDAWCNR 560



 Score = 77.8 bits (190), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 81/386 (20%), Positives = 157/386 (40%), Gaps = 53/386 (13%)

Query: 144 VVHLHAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPN 203
           +VHL    ++ KA A  D+A ++ PN  D+++ RG      G+YE+A+ + +K + + P 
Sbjct: 290 LVHL---GEYQKAVASFDKALEIKPNDYDAWHYRGVALGYLGEYEQAVASYNKALEIKPE 346

Query: 204 FHVARAQRHFVVHKMIVPGDRERVEQSLKEFRNFVDTHSNVVEACTLFAQVLVDQEDFDG 263
           +H A      + +  +  G+    ++++  F   ++   +  EA       LV   ++  
Sbjct: 347 YHQA------LSNWGVTLGNLGEYQKAVASFDKALEIKPDDHEAWCKRGVTLVHLGEYQK 400

Query: 264 AEEYFNRSIRVDPENASLYVHRAMLMLQARGNVDEAIKLIEKAISIDKSCMFAYETLGTI 323
           A   F++++ + P +   + +R +++       ++A+   +KA+ I      A+   G  
Sbjct: 401 AVASFDKALEIKPNDYDAWCNRGVVLCDHFRQYEQAVASYDKALQIKPDKYEAWNNRGVA 460

Query: 324 EVQRGRLEEAVKCFNKALPLARDEAELSHIYSLRDAAIAQMKVCERYNIKKKVSPRSQNI 383
               G  E+AV  ++KAL                                 K+ P     
Sbjct: 461 LGNLGEYEQAVASYDKAL---------------------------------KIKPDDYQA 487

Query: 384 TKNEKLAIKQLRENNDIIIRPADKGGKTVVMDKADYTQKM--TSIL---NSNDYEIIPGD 438
             N  + +  L E    +    DK    V+  K DY        IL   N   YE     
Sbjct: 488 CFNRGVTLGYLGEYEQAVAS-YDK----VLEFKPDYYDAWYNRGILLCDNLGRYEQAVAS 542

Query: 439 PTKTIE-ESEKYGNLENESGQKHAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFG 497
             K +E + + Y    N         ++ +A A  D+A ++ P+  +++ +RG      G
Sbjct: 543 FNKALEIKPDYYDAWCNRGVALDHLGEYEQAVASYDKALEIKPDDHETWCKRGVTLDHLG 602

Query: 498 QYEEALRNLDKTIALNPNFHVARAQR 523
           +YE+A+ + DK +   P++H A   R
Sbjct: 603 EYEQAVASYDKALKFKPDYHKAWYGR 628



 Score = 74.7 bits (182), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 77/396 (19%), Positives = 162/396 (40%), Gaps = 31/396 (7%)

Query: 150 ASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARA 209
           A DF  A A  D+A +  P+  + +  RG      G+YE+A+   DK +   P++H    
Sbjct: 157 AGDFAGAIASFDKALEFKPDYYEVWLIRGVTLYHLGEYEQAVAFFDKALEFKPDYHEVWL 216

Query: 210 QRHFVVHKMIVPGDRERVEQSLKEFRNFVDTHSNVVEACTLFAQVLVDQEDFDGAEEYFN 269
            R   +  +         EQ++  +   ++   +  EA       L +  +++ A   ++
Sbjct: 217 IRGGALDYL------GEYEQAVASYDKALEIKPDYHEAWCKRGVALANLGEYEQAVASYD 270

Query: 270 RSIRVDPENASLYVHRAMLMLQARGNVDEAIKLIEKAISIDKSCMFAYETLGTIEVQRGR 329
           +++ + P+   +  +R +L++   G   +A+   +KA+ I  +   A+   G      G 
Sbjct: 271 KALEIKPDYHEVGNNRGLLLVHL-GEYQKAVASFDKALEIKPNDYDAWHYRGVALGYLGE 329

Query: 330 LEEAVKCFNKALPLARDEAELSHIYSLRDAAIAQ-MKVCERYNIKKKVSPRSQNITKNEK 388
            E+AV  +NKAL +  +  +    + +    + +  K    ++   ++ P          
Sbjct: 330 YEQAVASYNKALEIKPEYHQALSNWGVTLGNLGEYQKAVASFDKALEIKPDDHEAWCKRG 389

Query: 389 LAIKQLRENNDII--------IRPADKGG---KTVVMDKADYTQKMTSILNSNDYEIIPG 437
           + +  L E    +        I+P D      + VV+   D+ ++    + S D      
Sbjct: 390 VTLVHLGEYQKAVASFDKALEIKPNDYDAWCNRGVVL--CDHFRQYEQAVASYD------ 441

Query: 438 DPTKTIE-ESEKYGNLENESGQKHAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLF 496
              K ++ + +KY    N         ++ +A A  D+A K+ P+   + + RG      
Sbjct: 442 ---KALQIKPDKYEAWNNRGVALGNLGEYEQAVASYDKALKIKPDDYQACFNRGVTLGYL 498

Query: 497 GQYEEALRNLDKTIALNPNFHVARAQRHFVWTSTLA 532
           G+YE+A+ + DK +   P+++ A   R  +    L 
Sbjct: 499 GEYEQAVASYDKVLEFKPDYYDAWYNRGILLCDNLG 534



 Score = 49.7 bits (117), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 45/213 (21%), Positives = 90/213 (42%), Gaps = 7/213 (3%)

Query: 137 NAHIKRAVVHLHAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDK 196
           +A   R ++       + +A A  ++A ++ P+  D++  RG      G+YE+A+ + DK
Sbjct: 520 DAWYNRGILLCDNLGRYEQAVASFNKALEIKPDYYDAWCNRGVALDHLGEYEQAVASYDK 579

Query: 197 TIALNPNFHVARAQRHFVVHKMIVPGDRERVEQSLKEFRNFVDTHSNVVEACTLFAQVLV 256
            + + P+ H    +R   +  +   G+ E+   S  +   F   +        +    L 
Sbjct: 580 ALEIKPDDHETWCKRGVTLDHL---GEYEQAVASYDKALKFKPDYHKAWYGRGVTLDHLG 636

Query: 257 DQEDFDGAEEYFNRSIRVDPENASLYVHRAMLMLQARGNVDEAIKLIEKAISIDKSCMFA 316
           + E    A   +N+++   P+   ++  R    L   G  ++A+   +KA+ I      A
Sbjct: 637 ENEQ---AVASYNKALEFKPDYHEVWNSRGN-ALNNLGEYEQAVASYDKALEIKPDYYDA 692

Query: 317 YETLGTIEVQRGRLEEAVKCFNKALPLARDEAE 349
           +   G      G  E+AV  ++KAL    D+ E
Sbjct: 693 WCNRGVALDHLGEYEQAVTSYDKALEFKPDKYE 725



 Score = 48.9 bits (115), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 30/120 (25%), Positives = 56/120 (46%), Gaps = 5/120 (4%)

Query: 419 YTQKMTSILNSNDYEIIPGDPTKTIEESEKYGNLENESGQKHA-ASDFTKAFADLDEAEK 477
           + ++  ++ N  +YE       K +E    Y  + N  G       ++ KA A  D+A +
Sbjct: 249 WCKRGVALANLGEYEQAVASYDKALEIKPDYHEVGNNRGLLLVHLGEYQKAVASFDKALE 308

Query: 478 VDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQRHFVWTSTLAELMAF 537
           + PN  D+++ RG      G+YE+A+ + +K + + P +H A +     W  TL  L  +
Sbjct: 309 IKPNDYDAWHYRGVALGYLGEYEQAVASYNKALEIKPEYHQALSN----WGVTLGNLGEY 364



 Score = 42.0 bits (97), Expect = 0.90,   Method: Compositional matrix adjust.
 Identities = 19/64 (29%), Positives = 34/64 (53%)

Query: 454 NESGQKHAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALN 513
           N+  +++ A DF  A A  D+A +  P+  + +  RG      G+YE+A+   DK +   
Sbjct: 149 NKGYEQYNAGDFAGAIASFDKALEFKPDYYEVWLIRGVTLYHLGEYEQAVAFFDKALEFK 208

Query: 514 PNFH 517
           P++H
Sbjct: 209 PDYH 212


>gi|338814927|ref|ZP_08626892.1| peptidase C14 caspase catalytic subunit p20 [Acetonema longum DSM
           6540]
 gi|337273094|gb|EGO61766.1| peptidase C14 caspase catalytic subunit p20 [Acetonema longum DSM
           6540]
          Length = 525

 Score = 94.0 bits (232), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 100/441 (22%), Positives = 190/441 (43%), Gaps = 51/441 (11%)

Query: 96  TKALARLLRATVYIFTSQSTKAIEDLTQLVEDTSVDPKIKVNAHIKRAVVHLHAASDFTK 155
           + A A L R  +Y    +  +AI D T+ ++  + +PK    A   R +    A   + +
Sbjct: 65  SHAGAYLQRGNIYYTRGKYVEAIADFTRSIQLDAANPK----AFYSRGLA-FRARKMYDQ 119

Query: 156 AFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQRHFVV 215
           A  D ++   ++    ++YYQ G +      YE+A+R+  KT+ LNP    +  +R  V 
Sbjct: 120 ALTDFNKVIALNRKYWEAYYQSGLVQASKENYEQAVRDYTKTLELNPRHVPSLFERGNVF 179

Query: 216 HKMIVPGDRERVEQSLKEFRNFVDTHSNVVEACTLFAQVLVDQEDFDGAEEYFNRSIRVD 275
             +      E+ +Q+L+++   ++     V+       V  +    + A   +N+++ +D
Sbjct: 180 FAL------EQWDQALRDYNRAIELDPRSVQVYNSRGLVYAETGKPEAALADYNKALEID 233

Query: 276 PENASLYVHRA-MLMLQARGNVDEAIKLIEKAISIDKSCMFAYETLGTIEVQRGRLEEAV 334
           P+    Y +R  +  LQ R    EAI    KA+ ++ S   AY+  G     +G  ++A+
Sbjct: 234 PDYVHAYNNRGDLYQLQKR--YGEAIADFNKALELNPSSAAAYDRRGRCYYAQGNYDQAI 291

Query: 335 KCFNKALPLARDEAELSHIY----------SLRDAAIAQMKVCERYNIKKKVSPRSQNIT 384
             ++KAL +   ++   H Y           LRD AIA       Y++  +++PR+    
Sbjct: 292 ADYSKALDI---DSRYIHAYNNRGNAYSNRGLRDQAIAD------YSLAIEINPRNAIAY 342

Query: 385 KNEKLAIKQLRENNDII--------IRPADKGGKTVVMDKADYTQKMTSILNSNDYEIIP 436
           +N  L       ++  I        +RP   G K   +++ D  +      +   Y++  
Sbjct: 343 RNRGLVYWTKGMHDQAIADFSQALELRP---GFKLAYINRGDVYR------DKGRYDLSL 393

Query: 437 GDPTKTIEESEKYGNLENESGQKH-AASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCL 495
            D  K +  +  Y       GQ + A  ++ +A  D ++A  + P VA+ +  R   Y  
Sbjct: 394 EDFNKVLTLNSDYVFAYQSRGQTYFAMGEYDRAIIDYNKALALKPQVAEVHKNRADAYRK 453

Query: 496 FGQYEEALRNLDKTIALNPNF 516
            G+  EA+ + D  + LNP  
Sbjct: 454 LGKATEAVADYDAALKLNPGL 474



 Score = 82.8 bits (203), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 79/324 (24%), Positives = 144/324 (44%), Gaps = 22/324 (6%)

Query: 75  EDYLTAIRHCTEEIESTSSNHTKALARLLRATVYIFTSQSTKAIEDLTQLVEDTSVDPKI 134
           E+Y  A+R  T+ +E  +  H  +L    R  V+    Q  +A+ D  + +E   +DP+ 
Sbjct: 149 ENYEQAVRDYTKTLE-LNPRHVPSL--FERGNVFFALEQWDQALRDYNRAIE---LDPR- 201

Query: 135 KVNAHIKRAVVHLHAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNL 194
            V  +  R +V+         A AD ++A ++DP+   +Y  RG +Y L  +Y EA+ + 
Sbjct: 202 SVQVYNSRGLVYAETGKP-EAALADYNKALEIDPDYVHAYNNRGDLYQLQKRYGEAIADF 260

Query: 195 DKTIALNPNFHVARAQRHFVVHKMIVPGDRERVEQSLKEFRNFVDTHSNVVEACTLFAQV 254
           +K + LNP+   A  +R    +       +   +Q++ ++   +D  S  + A       
Sbjct: 261 NKALELNPSSAAAYDRRGRCYYA------QGNYDQAIADYSKALDIDSRYIHAYNNRGNA 314

Query: 255 LVDQEDFDGAEEYFNRSIRVDPENASLYVHRAMLMLQARGNVDEAIKLIEKAISIDKSCM 314
             ++   D A   ++ +I ++P NA  Y +R  L+   +G  D+AI    +A+ +     
Sbjct: 315 YSNRGLRDQAIADYSLAIEINPRNAIAYRNRG-LVYWTKGMHDQAIADFSQALELRPGFK 373

Query: 315 FAYETLGTIEVQRGRLEEAVKCFNKALPLARDEAELSHIYSLRDAAIAQMKVCER----Y 370
            AY   G +   +GR + +++ FNK L L  D       Y  R      M   +R    Y
Sbjct: 374 LAYINRGDVYRDKGRYDLSLEDFNKVLTLNSD---YVFAYQSRGQTYFAMGEYDRAIIDY 430

Query: 371 NIKKKVSPRSQNITKNEKLAIKQL 394
           N    + P+   + KN   A ++L
Sbjct: 431 NKALALKPQVAEVHKNRADAYRKL 454



 Score = 81.6 bits (200), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 90/393 (22%), Positives = 166/393 (42%), Gaps = 69/393 (17%)

Query: 146 HLHAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIAL---NP 202
           H  A SDF++A         +D + A +Y QRG IY   G+Y EA+ +  ++I L   NP
Sbjct: 49  HEQAMSDFSRAIG-------LDSSHAGAYLQRGNIYYTRGKYVEAIADFTRSIQLDAANP 101

Query: 203 NFHVARAQRHFVVHKMIVPGDRERVEQSLKEFRNFVDTHSNVVEACTLFAQVLVDQEDFD 262
               +R    F   KM         +Q+L +F   +  +    EA      V   +E+++
Sbjct: 102 KAFYSRGL-AFRARKM--------YDQALTDFNKVIALNRKYWEAYYQSGLVQASKENYE 152

Query: 263 GAEEYFNRSIRVDPENASLYVHRAMLMLQARGNV-------DEAIKLIEKAISIDKSCMF 315
            A   + +++ ++P        R +  L  RGNV       D+A++   +AI +D   + 
Sbjct: 153 QAVRDYTKTLELNP--------RHVPSLFERGNVFFALEQWDQALRDYNRAIELDPRSVQ 204

Query: 316 AYETLGTIEVQRGRLEEAVKCFNKALPLARDEAELSHIYSLRDAAIAQMKVCERYNIKKK 375
            Y + G +  + G+ E A+  +NKAL +   + +  H Y+ R          + Y ++K+
Sbjct: 205 VYNSRGLVYAETGKPEAALADYNKALEI---DPDYVHAYNNR---------GDLYQLQKR 252

Query: 376 VSPRSQNITKNEKLAIKQLRENNDIIIRPADKGGKTVVMDKADYTQKMTSILNSNDYEII 435
                         AI     N  + + P+           A Y ++        +Y+  
Sbjct: 253 YGE-----------AIADF--NKALELNPS---------SAAAYDRRGRCYYAQGNYDQA 290

Query: 436 PGDPTKTIEESEKYGNLENESGQKHAASDFT-KAFADLDEAEKVDPNVADSYYQRGQIYC 494
             D +K ++   +Y +  N  G  ++      +A AD   A +++P  A +Y  RG +Y 
Sbjct: 291 IADYSKALDIDSRYIHAYNNRGNAYSNRGLRDQAIADYSLAIEINPRNAIAYRNRGLVYW 350

Query: 495 LFGQYEEALRNLDKTIALNPNFHVARAQRHFVW 527
             G +++A+ +  + + L P F +A   R  V+
Sbjct: 351 TKGMHDQAIADFSQALELRPGFKLAYINRGDVY 383


>gi|427739440|ref|YP_007058984.1| trypsin-like serine protease with C-terminal PDZ domain [Rivularia
            sp. PCC 7116]
 gi|427374481|gb|AFY58437.1| trypsin-like serine protease with C-terminal PDZ domain [Rivularia
            sp. PCC 7116]
          Length = 1173

 Score = 94.0 bits (232), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 94/392 (23%), Positives = 170/392 (43%), Gaps = 48/392 (12%)

Query: 161  DEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQRHFVVHKMIV 220
            +++ +++PN+A+SY +R +     G Y EA+++L+K + L P+  +A  QR  V +    
Sbjct: 668  NQSIQLNPNLAESYIRRSRTRSNLGDYSEAIKDLNKALKLQPDLAIAYVQRALVRYW--- 724

Query: 221  PGDRERVEQSLKEFRNFVDTHSNVVEACTLFAQVLVDQEDFDGAEEYFNRSIRVDPENAS 280
               ++  +++L + +  +    N V+A  +   V     + +G  + FN+++++ P+NA 
Sbjct: 725  ---QKDYQEALNDTKTAIRLQPNFVDAYWVSGLVHAQMNNREGFIKDFNKALQIQPDNAV 781

Query: 281  LYVHRA----MLMLQARGNVD--EAIKLIEK----------------------------A 306
            +Y  R     +L   A+G  D  +AI+L  K                            A
Sbjct: 782  IYAQRGYAHYLLGDTAKGIADYNDAIRLNSKLAYEFYTQRGDIRWIQKDYNGAVADYTQA 841

Query: 307  ISIDKSCMFAYETLGTIEVQRGRLEEAVKCFNKALPLARDEAELSHIYSLRDAAIAQMK- 365
            +S   S + AY   G    + G+ +++++ FNKAL L   + + S IYS R  +   +K 
Sbjct: 842  LSFRSSHVPAYIGRGKAYAKLGKRQQSLQDFNKALSL---QPKNSLIYSSRGYSRLLLKD 898

Query: 366  ---VCERYNIKKKVSPRSQNITKNEKLAIKQLRENNDIIIRPADKGGKTVVMDKADYTQK 422
                 E YN    ++P+   +  N +   +  +EN    I    K       D   Y  +
Sbjct: 899  YQAGVEDYNKAIGLTPQLAYLFYNNRGNAQYEQENYKGAIADYTKAISLKPKDAVFYWNR 958

Query: 423  MTSILNSNDYEIIPGDPTKTIEESEKYGNLENESG-QKHAASDFTKAFADLDEAEKVDPN 481
                L    Y+    D T  I  +  Y +  N+ G       D+  A AD  +A  ++PN
Sbjct: 959  GDVYLTQKQYQQAIADFTAAIRLNPDYASAYNKRGIALEHGKDYKGAIADYTKAISLEPN 1018

Query: 482  VADSYYQRGQIYCLFGQYEEALRNLDKTIALN 513
                Y  RG +Y    QY++A+ +    I LN
Sbjct: 1019 QGVFYSNRGGVYLTQKQYQQAIDDFTAAIRLN 1050



 Score = 78.2 bits (191), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 95/423 (22%), Positives = 168/423 (39%), Gaps = 74/423 (17%)

Query: 153 FTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQRH 212
           + +A      A K +P    +  Q G  Y   G+Y EAL+   +TI L P+         
Sbjct: 592 YPEAIKSFKLANKYNPESDRALRQLGDAYWYSGEYPEALQTFKQTIQLRPD--------D 643

Query: 213 FVVHKMIVPGDRE--RVEQSLKEFRNFVDTHSNVVEACTLFAQVLVDQEDFDGAEEYFNR 270
           F++H  +     +  R  ++L+     +  + N+ E+    ++   +  D+  A +  N+
Sbjct: 644 FILHNWLADAFNQLGRHPEALQAGNQSIQLNPNLAESYIRRSRTRSNLGDYSEAIKDLNK 703

Query: 271 SIRVDPENASLYVHRAMLMLQARGNVDEAIKLIEKAISIDKSCMFAYETLGTIEVQRGRL 330
           ++++ P+ A  YV RA++    + +  EA+   + AI +  + + AY   G +  Q    
Sbjct: 704 ALKLQPDLAIAYVQRALVRYWQK-DYQEALNDTKTAIRLQPNFVDAYWVSGLVHAQMNNR 762

Query: 331 EEAVKCFNKALPLARDEAELSHIYSLRDAAIAQMKVCERYNIKKKVSPRSQNITKNEKLA 390
           E  +K FNKAL +  D A    IY+ R  A   +      +  K ++  +  I  N KLA
Sbjct: 763 EGFIKDFNKALQIQPDNAV---IYAQRGYAHYLLG-----DTAKGIADYNDAIRLNSKLA 814

Query: 391 IKQLRENNDIIIRPADKGGKTVVMDKADYTQKMT-------------------------- 424
            +   +  DI     D  G       ADYTQ ++                          
Sbjct: 815 YEFYTQRGDIRWIQKDYNGAV-----ADYTQALSFRSSHVPAYIGRGKAYAKLGKRQQSL 869

Query: 425 -------------SILNSN---------DYEIIPGDPTKTIEESEKYGNL--ENESGQKH 460
                        S++ S+         DY+    D  K I  + +   L   N    ++
Sbjct: 870 QDFNKALSLQPKNSLIYSSRGYSRLLLKDYQAGVEDYNKAIGLTPQLAYLFYNNRGNAQY 929

Query: 461 AASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVAR 520
              ++  A AD  +A  + P  A  Y+ RG +Y    QY++A+ +    I LNP++  A 
Sbjct: 930 EQENYKGAIADYTKAISLKPKDAVFYWNRGDVYLTQKQYQQAIADFTAAIRLNPDYASAY 989

Query: 521 AQR 523
            +R
Sbjct: 990 NKR 992



 Score = 52.4 bits (124), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 69/278 (24%), Positives = 114/278 (41%), Gaps = 27/278 (9%)

Query: 48   GVELTNGDTNESHELDLL---SKAKRAFEHEDYLTAIRHCTEEIESTSSNHTKALARLLR 104
            GVE  N     + +L  L   ++    +E E+Y  AI   T+ I   S     A+    R
Sbjct: 902  GVEDYNKAIGLTPQLAYLFYNNRGNAQYEQENYKGAIADYTKAI---SLKPKDAVFYWNR 958

Query: 105  ATVYIFTSQSTKAIEDLTQLVEDTSVDPKIKVNAHIKRAVVHLHAASDFTKAFADLDEAE 164
              VY+   Q  +AI D T  +    ++P    +A+ KR +   H   D+  A AD  +A 
Sbjct: 959  GDVYLTQKQYQQAIADFTAAIR---LNPDY-ASAYNKRGIALEHG-KDYKGAIADYTKAI 1013

Query: 165  KVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQRHFVV-----HKMI 219
             ++PN    Y  RG +Y    QY++A+ +    I LN     A + R         +K  
Sbjct: 1014 SLEPNQGVFYSNRGGVYLTQKQYQQAIDDFTAAIRLNQENASAYSIRAIARDMQEDYKGA 1073

Query: 220  VPGDRERVEQSLKEFRNFVDTHSNVVEACTLFAQVLVDQE-----DFDGAEEYFNRSIRV 274
            +    E +    KE R + +   N       + + + D       D D  + Y  RS+  
Sbjct: 1074 IADHTEAIGIKPKEAR-YYNRRGNTYLKNKEYRKAIADYTTAISLDVDDGDAYGLRSLAY 1132

Query: 275  ----DPENASLYVHRAMLMLQARGNVDEAIKLIEKAIS 308
                D + A   + +A  + Q +GN+D   KL++  +S
Sbjct: 1133 AGLGDKQKAIQDLQKASQIFQKKGNMDN-YKLVQSMLS 1169



 Score = 43.9 bits (102), Expect = 0.22,   Method: Compositional matrix adjust.
 Identities = 18/54 (33%), Positives = 35/54 (64%)

Query: 473 DEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQRHFV 526
           +++ +++PN+A+SY +R +     G Y EA+++L+K + L P+  +A  QR  V
Sbjct: 668 NQSIQLNPNLAESYIRRSRTRSNLGDYSEAIKDLNKALKLQPDLAIAYVQRALV 721


>gi|291569240|dbj|BAI91512.1| TPR domain protein [Arthrospira platensis NIES-39]
          Length = 1337

 Score = 93.6 bits (231), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 98/457 (21%), Positives = 187/457 (40%), Gaps = 32/457 (7%)

Query: 76  DYLTAIRHCTEEIESTSSNHTKALARLLRATVYIFTSQSTKAIEDLTQLVEDTSVDPKIK 135
           +Y  AI  C + I+     H +A A   R     +  +  KAI         +S D  IK
Sbjct: 192 EYEKAISSCDQAIKFKPDYH-EAWAN--RGVALSYLGEYEKAI---------SSCDQAIK 239

Query: 136 VNAHIKRAVVHLHAA----SDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEAL 191
               +  A +   +A     ++ KA +  D+A K  P++ +++  RG      G+YE+A+
Sbjct: 240 FKPDLHEAWLVRGSALGNLGEYEKAISSYDQAIKFKPDLHEAWNNRGNALANLGEYEKAI 299

Query: 192 RNLDKTIALNPNFHVARAQRHFVVHKMIVPGDRERVEQSLKEFRNFVDTHSNVVEACTLF 251
            + D+ I   P++H A   R   +  +         E+++  +   +    ++ EA    
Sbjct: 300 SSCDQAIKFKPDYHEAWLVRGVALSYL------GEYEKAISSYDQAIKFKPDLHEAWNNR 353

Query: 252 AQVLVDQEDFDGAEEYFNRSIRVDPENASLYVHRAMLMLQARGNVDEAIKLIEKAISIDK 311
              L +  +++ A   ++++I+  P+    + +R  L L   G  ++AI   ++AI    
Sbjct: 354 GNALANLGEYEKAISSYDQAIKFKPDYHEAWYNRG-LALGNLGEYEKAISSYDQAIKFKP 412

Query: 312 SCMFAYETLGTIEVQRGRLEEAVKCFNKALPLARDEAELSHIYSLRDAAIAQM----KVC 367
               A+   G      G  E+A+  +++A+    D  E    + +R  A++ +    K  
Sbjct: 413 DYHEAWFNRGLALYDLGEYEKAISSYDQAIKFKPDYHE---AWFVRGVALSYLGEHEKAI 469

Query: 368 ERYNIKKKVSPRSQNITKNEKLAIKQLRENNDIIIRPADKGGKTVVMDKADYTQKMTSIL 427
             Y+   K+ P       N   A+  L E  +  I   D+  K    D   +  +  ++ 
Sbjct: 470 SSYDQAIKIKPDLHEAWSNRGSALSHLGEY-EKAISSYDQAIKFKPDDHEAWFNRGLALS 528

Query: 428 NSNDYEIIPGDPTKTIEESEKYGN-LENESGQKHAASDFTKAFADLDEAEKVDPNVADSY 486
              +YE       + I+    Y     N  G      ++ KA +  D+A K  P+   ++
Sbjct: 529 YLGEYEKAISSYDQAIKFKPDYHEAWSNRGGALSDLGEYEKAISSYDQAIKFKPDDHQAW 588

Query: 487 YQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQR 523
             RG      G+YE+A+ + D+ I   P+FH A + R
Sbjct: 589 SNRGVALSYLGEYEKAISSYDQAIKFKPDFHEAWSNR 625



 Score = 92.8 bits (229), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 87/403 (21%), Positives = 170/403 (42%), Gaps = 16/403 (3%)

Query: 128 TSVDPKIKVN-----AHIKRAVVHLHAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYC 182
           +S D  IK       A + R V  L    ++ KA +  D+A K  P++ +++  RG    
Sbjct: 300 SSCDQAIKFKPDYHEAWLVRGVA-LSYLGEYEKAISSYDQAIKFKPDLHEAWNNRGNALA 358

Query: 183 LFGQYEEALRNLDKTIALNPNFHVARAQRHFVVHKMIVPGDRERVEQSLKEFRNFVDTHS 242
             G+YE+A+ + D+ I   P++H A   R   +      G+    E+++  +   +    
Sbjct: 359 NLGEYEKAISSYDQAIKFKPDYHEAWYNRGLAL------GNLGEYEKAISSYDQAIKFKP 412

Query: 243 NVVEACTLFAQVLVDQEDFDGAEEYFNRSIRVDPENASLYVHRAMLMLQARGNVDEAIKL 302
           +  EA       L D  +++ A   ++++I+  P+    +  R +  L   G  ++AI  
Sbjct: 413 DYHEAWFNRGLALYDLGEYEKAISSYDQAIKFKPDYHEAWFVRGV-ALSYLGEHEKAISS 471

Query: 303 IEKAISIDKSCMFAYETLGTIEVQRGRLEEAVKCFNKALPLARDEAELSHIYSLRDAAIA 362
            ++AI I      A+   G+     G  E+A+  +++A+    D+ E      L  + + 
Sbjct: 472 YDQAIKIKPDLHEAWSNRGSALSHLGEYEKAISSYDQAIKFKPDDHEAWFNRGLALSYLG 531

Query: 363 QM-KVCERYNIKKKVSPRSQNITKNEKLAIKQLRENNDIIIRPADKGGKTVVMDKADYTQ 421
           +  K    Y+   K  P       N   A+  L E  +  I   D+  K    D   ++ 
Sbjct: 532 EYEKAISSYDQAIKFKPDYHEAWSNRGGALSDLGEY-EKAISSYDQAIKFKPDDHQAWSN 590

Query: 422 KMTSILNSNDYEIIPGDPTKTIEESEKYGNLENESGQKHA-ASDFTKAFADLDEAEKVDP 480
           +  ++    +YE       + I+    +    +  G   +   ++ KA +  D+A K  P
Sbjct: 591 RGVALSYLGEYEKAISSYDQAIKFKPDFHEAWSNRGLALSYLGEYEKAISSYDQAIKFKP 650

Query: 481 NVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQR 523
           +  +++  RG      G+YE+A+ + D+ I   P+FH A + R
Sbjct: 651 DYHEAWSNRGGALSHLGEYEKAISSYDQAIKFKPDFHQAWSNR 693



 Score = 79.0 bits (193), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 89/411 (21%), Positives = 166/411 (40%), Gaps = 50/411 (12%)

Query: 152 DFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQR 211
           D+  A   L++A +  P+  +++  RG      G+YE+A+ + D+ I   P++H A A R
Sbjct: 158 DWRGAIFSLEKAIEFKPDYHEAWLVRGSALGNLGEYEKAISSCDQAIKFKPDYHEAWANR 217

Query: 212 HFVVHKMIVPGDRERVEQSLKEFRNF-VDTHSNVVEACTLFAQVLVDQEDFDGAEEYFNR 270
              +  +   G+ E+   S  +   F  D H    EA  +    L +  +++ A   +++
Sbjct: 218 GVALSYL---GEYEKAISSCDQAIKFKPDLH----EAWLVRGSALGNLGEYEKAISSYDQ 270

Query: 271 SIRVDPENASLYVHRAMLMLQARGNVDEAIKLIEKAISIDKSCMFAYETLGTIEVQRGRL 330
           +I+  P+    + +R    L   G  ++AI   ++AI        A+   G      G  
Sbjct: 271 AIKFKPDLHEAWNNRGN-ALANLGEYEKAISSCDQAIKFKPDYHEAWLVRGVALSYLGEY 329

Query: 331 EEAVKCFNKALPLARDEAELSHIYSLRDAAIAQM----KVCERYNIKKKVSPRSQNITKN 386
           E+A+  +++A+    D   L   ++ R  A+A +    K    Y+   K  P       N
Sbjct: 330 EKAISSYDQAIKFKPD---LHEAWNNRGNALANLGEYEKAISSYDQAIKFKPDYHEAWYN 386

Query: 387 EKLAIKQLRE--------NNDIIIRP----ADKGGKTVVMDKADYTQKMTS----ILNSN 430
             LA+  L E        +  I  +P    A       + D  +Y + ++S    I    
Sbjct: 387 RGLALGNLGEYEKAISSYDQAIKFKPDYHEAWFNRGLALYDLGEYEKAISSYDQAIKFKP 446

Query: 431 DYE---IIPGDPTKTIEESEK---------------YGNLENESGQKHAASDFTKAFADL 472
           DY     + G     + E EK               +    N         ++ KA +  
Sbjct: 447 DYHEAWFVRGVALSYLGEHEKAISSYDQAIKIKPDLHEAWSNRGSALSHLGEYEKAISSY 506

Query: 473 DEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQR 523
           D+A K  P+  ++++ RG      G+YE+A+ + D+ I   P++H A + R
Sbjct: 507 DQAIKFKPDDHEAWFNRGLALSYLGEYEKAISSYDQAIKFKPDYHEAWSNR 557


>gi|414078029|ref|YP_006997347.1| hypothetical protein ANA_C12830 [Anabaena sp. 90]
 gi|413971445|gb|AFW95534.1| TPR repeat-containing protein [Anabaena sp. 90]
          Length = 442

 Score = 93.6 bits (231), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 84/382 (21%), Positives = 173/382 (45%), Gaps = 41/382 (10%)

Query: 138 AHIKRAVVHLHAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKT 197
           A+I R  +  H   ++ KA AD ++  K++PN  ++Y+ RG  Y    +Y+ A+ N +++
Sbjct: 52  AYINRGNI-FHILGNYQKAIADYNQCIKINPNFPEAYHNRGNSYYALQEYQSAISNYNRS 110

Query: 198 IALNPNFHVARAQRHFVVHKMIVPGDRERVEQSLKEFRNFVDTHSNVVEACTLFAQVLVD 257
           + +NP F  A   R  V  ++      +   Q++ +F   +    + ++A      V  +
Sbjct: 111 LEINPKFGAAYYNRGLVYARI------QDYYQAIADFNQALKIVPDDIQAYYERGLVHSN 164

Query: 258 QEDFDGAEEYFNRSIRVDPENASLYVHRAMLMLQARGNVDEAIKLIEKAISIDKSCMFAY 317
             D++ A + +N++++++P   S+Y  RA       GN + AI    +A+ ID     AY
Sbjct: 165 LGDYENAIKDYNQALQINPTLVSVYGFRANAH-HHLGNYENAIIDYNQALQIDPHLATAY 223

Query: 318 ETLGTIEVQRGRLEEAVKCFNKALPLARDEAELSHIYSLRDAAIAQMKVCERYNIKKKVS 377
              G +      L  AV  + +A+ ++    E +  Y  R  A   +      NI+  + 
Sbjct: 224 YGRGMVREAIQDLIGAVADYTQAIEVS---PEFASAYCKRGDAYKLLG-----NIQTAIQ 275

Query: 378 PRSQNITKNEKLAIKQLRENNDIIIRPADKGGKTVVMDKADYTQKMTSILNSNDYEIIPG 437
             +Q            L+ ++D +     +G    +    D+T  ++        E +  
Sbjct: 276 DYNQ-----------ALKIDSDSLAAYYHRGSSRYI--AKDFTGAISDFT-----EALRL 317

Query: 438 DPTKTIEESEKYGNLENESGQKHAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFG 497
           D    +  S++       +  ++A  ++ KA +D  +A  ++PN+A+ ++ RG+ + L G
Sbjct: 318 DSQSAVFYSDR-------ANARYALKEYQKAISDYTQAISINPNLAEDWFNRGRSHFLLG 370

Query: 498 QYEEALRNLDKTIALNPNFHVA 519
           +   AL +L++ I L P + +A
Sbjct: 371 ELNTALADLNQAIQLQPRYPLA 392



 Score = 76.3 bits (186), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 84/392 (21%), Positives = 172/392 (43%), Gaps = 42/392 (10%)

Query: 164 EKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQRHFVVHKMIVPGD 223
           + +D +V ++ +Q+G  +   G Y++AL N D  + L  NF +A   R  + H   + G+
Sbjct: 9   KNIDFDVVNALHQQGLDHYHDGNYQQALANFDAALELYANFSMAYINRGNIFH---ILGN 65

Query: 224 RERVEQSLKEFRNFVDTHSNVVEACTLFAQVLVDQEDFDGAEEYFNRSIRVDPENASLYV 283
            ++   ++ ++   +  + N  EA           +++  A   +NRS+ ++P+  + Y 
Sbjct: 66  YQK---AIADYNQCIKINPNFPEAYHNRGNSYYALQEYQSAISNYNRSLEINPKFGAAYY 122

Query: 284 HRAMLMLQARGNVDEAIKLIEKAISIDKSCMFAYETLGTIEVQRGRLEEAVKCFNKALPL 343
           +R ++  + + +  +AI    +A+ I    + AY   G +    G  E A+K +N+AL +
Sbjct: 123 NRGLVYARIQ-DYYQAIADFNQALKIVPDDIQAYYERGLVHSNLGDYENAIKDYNQALQI 181

Query: 344 ARDEAELSHIYSLRDAAIAQMKVCERYNIKKKVSPRSQNITKNEKLAIKQLRENNDIIIR 403
                 L  +Y  R  A   +      N +  +   +Q +  +  LA          ++R
Sbjct: 182 ---NPTLVSVYGFRANAHHHLG-----NYENAIIDYNQALQIDPHLATAYYGRG---MVR 230

Query: 404 PADKGGKTVVMDKADYTQKM-------TSILNSNDYEIIPGDPTKTIEESEKYGNLENES 456
            A    + ++   ADYTQ +       ++     D   + G+    I++  +   ++++S
Sbjct: 231 EAI---QDLIGAVADYTQAIEVSPEFASAYCKRGDAYKLLGNIQTAIQDYNQALKIDSDS 287

Query: 457 --------GQKHAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDK 508
                     ++ A DFT A +D  EA ++D   A  Y  R        +Y++A+ +  +
Sbjct: 288 LAAYYHRGSSRYIAKDFTGAISDFTEALRLDSQSAVFYSDRANARYALKEYQKAISDYTQ 347

Query: 509 TIALNPNF---HVARAQRHFV---WTSTLAEL 534
            I++NPN       R + HF+     + LA+L
Sbjct: 348 AISINPNLAEDWFNRGRSHFLLGELNTALADL 379



 Score = 52.0 bits (123), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 23/80 (28%), Positives = 42/80 (52%)

Query: 460 HAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVA 519
           H   ++ KA AD ++  K++PN  ++Y+ RG  Y    +Y+ A+ N ++++ +NP F  A
Sbjct: 61  HILGNYQKAIADYNQCIKINPNFPEAYHNRGNSYYALQEYQSAISNYNRSLEINPKFGAA 120

Query: 520 RAQRHFVWTSTLAELMAFSD 539
              R  V+        A +D
Sbjct: 121 YYNRGLVYARIQDYYQAIAD 140


>gi|50546495|ref|XP_500717.1| YALI0B10362p [Yarrowia lipolytica]
 gi|49646583|emb|CAG82962.1| YALI0B10362p [Yarrowia lipolytica CLIB122]
          Length = 616

 Score = 93.2 bits (230), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 101/376 (26%), Positives = 168/376 (44%), Gaps = 58/376 (15%)

Query: 6   GAQHAKEEISKRSFFKPSKQFIKTYLKSFPNDPILQPDGLSNGVELTNGDTNESHE---- 61
            AQ A+EE   R    PS+QF+KTYL SF   P   P  L         DT+   E    
Sbjct: 233 AAQVAQEEYKDRPKVLPSQQFVKTYLGSF--RPRKMPKDLKK-------DTDHEAEQELV 283

Query: 62  --LDLLSKAKRAFEHEDYLTAIRHCTEEIESTSSNHT----KALARLLRATVYIFTSQST 115
             LDL+ K      ++ Y  A+ H  + I  T   +     KALA   RA      ++  
Sbjct: 284 LALDLIEKGT----YDSYTKALEHLDKAIAGTDLQNLFPTLKALALEYRAIFNFLMNKID 339

Query: 116 KAIEDLTQLVEDTSVDPKIKVNAHIKRAVVHLHAASDFTKAFADLDEAEKVDPNVADSYY 175
           +A  D+     D S+     V A+I R+ +HL    D   +  D++ A  ++    D Y+
Sbjct: 340 EAKADI-----DLSLQLSATVQAYITRSSIHLDTG-DKAASQKDIELALALNAEDPDCYH 393

Query: 176 QRGQIYCLFGQYEEALRNLDKTIALNPNF---HVARAQRHFVVHKMIVPGDRERVEQSLK 232
            +GQ+Y L  ++++A+   +K++ L+  F    + +A  H            ERV QS  
Sbjct: 394 HQGQLYFLSEEFDKAIECYNKSLELDDTFVPSLIFKANSHL--------KKGERVGQSNP 445

Query: 233 -EFRNFVDTHSNVVEA-----------CTLFAQVLVDQEDFDGAEEYFNRSIRVD----P 276
            E R+ VD    V E               +A+ L+  + +  +  Y +++I ++    P
Sbjct: 446 IETRHLVDACFEVFEEGAKKFPKNADLWNYYAEALLSTQKYSESLRYLDKAIALEKEQNP 505

Query: 277 ENASLY--VHRAMLMLQARGNVDEAIKLIEKAISIDKSCMFAYETLGTIEVQRGRLEEAV 334
            + S+   V +A+++ Q + + D ++ L ++A+ ID     A  TL  + +  G+ +EA+
Sbjct: 506 TSMSVLPLVSKALVIFQTQKDFDTSVDLCKQALVIDDRSEVAIGTLAQLYLSAGKHDEAM 565

Query: 335 KCFNKALPLARDEAEL 350
           K F K    AR E EL
Sbjct: 566 KMFKKNAEYARSEEEL 581


>gi|166363102|ref|YP_001655375.1| hypothetical protein MAE_03610 [Microcystis aeruginosa NIES-843]
 gi|166085475|dbj|BAG00183.1| tetratricopeptide repeat protein [Microcystis aeruginosa NIES-843]
          Length = 1179

 Score = 93.2 bits (230), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 105/446 (23%), Positives = 198/446 (44%), Gaps = 55/446 (12%)

Query: 104  RATVYIFTSQSTKAIEDLTQLVEDTSVDPKIKVNAHIKRAVVHLH------AASDFTKAF 157
            R  +Y    +   A+ D ++ ++   ++PK    A++ R  ++ +      A SD+TKA 
Sbjct: 726  RGNLYKNLQKYELALSDYSKAID---INPKF-AEAYVNRGNLYKNLQKYELALSDYTKAI 781

Query: 158  ADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQRHFVVHK 217
                    ++PN A +Y  RG +Y    +Y+ AL +  K I +NPN+ +A   R      
Sbjct: 782  -------DINPNYAMAYNNRGNLYSDLQKYDLALSDYSKAIDINPNYAMAYNNRG----- 829

Query: 218  MIVPGDRERVEQSLKEFRNFVDTHSNVVEACTLFAQVLVDQEDFDGAEEYFNRSIRVDPE 277
             ++  D ++ + +L ++   +D + N  EA      +  D + +D A   ++++I ++P 
Sbjct: 830  -VLYSDLQKYDLALSDYTKAIDINPNYAEAYVNRGVLYSDLQKYDLALSDYSKAIDINPN 888

Query: 278  NASLYVHRAMLMLQARGNVDEAIKLIEKAISIDKSCMFAYETLGTIEVQRGRLEEAVKCF 337
             A  YV+R  L    +   + A+    KAI I+ +   AY   G +     + E A+  +
Sbjct: 889  YAEAYVNRGNLYKNLQ-KYELALSDYSKAIDINPNYAEAYVNRGNLYKNLQKYELALSDY 947

Query: 338  NKALPLARDEAELSHIYSLRDAAIAQMK---VCERYNIKKKVSPR-------SQNITKNE 387
            +KA+ +  ++A++   Y+  +    Q K       Y+   +++P          N+ KN 
Sbjct: 948  SKAIDINPNDAKV--YYNRGNLYYNQQKYDLALSDYSKAIEINPNYAKAYYNRGNLYKNL 1005

Query: 388  K---LAIKQLRENNDIIIRPADKGGKTVVMDKADYTQKMTSILNSNDYEIIPGDPTKTIE 444
            +   LA+    +  DI  + A+            Y  +     N   Y++   D +K I+
Sbjct: 1006 QKYELALSDYSKAIDINPKFAEA-----------YYNRGLLYYNQQKYDLALSDFSKAID 1054

Query: 445  ESEKYGNLENESGQKHAASDFTK---AFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEE 501
             +       N  G  +  SD  K   A +D  +A  ++PN A++YY RG +Y    +Y+ 
Sbjct: 1055 INPNDAGAYNNRGNLY--SDLQKYELALSDYSKAIDINPNYANAYYNRGLLYYNQQKYDL 1112

Query: 502  ALRNLDKTIALNPNFHVARAQRHFVW 527
            AL +  K I +NPN   A   R  ++
Sbjct: 1113 ALSDFSKAIDINPNDAGAYVSRSILY 1138



 Score = 93.2 bits (230), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 100/392 (25%), Positives = 171/392 (43%), Gaps = 56/392 (14%)

Query: 156  AFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQRHFVV 215
            A +D ++A +++PN AD+Y  RG +Y    +YE AL +  K I +NP F  A   R  + 
Sbjct: 705  ALSDWNKAIELNPNFADAYNNRGNLYKNLQKYELALSDYSKAIDINPKFAEAYVNRGNLY 764

Query: 216  HKMIVPGDRERVEQSLKEFRNFVDTHSNVVEACTLFAQVLVDQEDFDGAEEYFNRSIRVD 275
              +      ++ E +L ++   +D + N   A      +  D + +D A   ++++I ++
Sbjct: 765  KNL------QKYELALSDYTKAIDINPNYAMAYNNRGNLYSDLQKYDLALSDYSKAIDIN 818

Query: 276  PENASLYVHRAMLMLQARGNVDEAIKLIEKAISIDKSCMFAYETLGTIEVQRGRLEEAVK 335
            P  A  Y +R +L    +   D A+    KAI I+ +   AY   G +     + + A+ 
Sbjct: 819  PNYAMAYNNRGVLYSDLQ-KYDLALSDYTKAIDINPNYAEAYVNRGVLYSDLQKYDLALS 877

Query: 336  CFNKALPLARDEAELSHIYSLRDAAIAQMKVCERYNIKKKVSPRSQNITKNEKLAIKQLR 395
             ++KA+ +  + AE                   R N+ K       N+ K E LA+    
Sbjct: 878  DYSKAIDINPNYAE---------------AYVNRGNLYK-------NLQKYE-LALSDYS 914

Query: 396  ENNDIIIRPADKGGKTVVMDKADYTQKMTSILNSNDYEIIPGDPTKTIE----ESEKY-- 449
            +  DI    A+            Y  +     N   YE+   D +K I+    +++ Y  
Sbjct: 915  KAIDINPNYAEA-----------YVNRGNLYKNLQKYELALSDYSKAIDINPNDAKVYYN 963

Query: 450  -GNL-ENESGQKHAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLD 507
             GNL  N+     A SD++KA        +++PN A +YY RG +Y    +YE AL +  
Sbjct: 964  RGNLYYNQQKYDLALSDYSKAI-------EINPNYAKAYYNRGNLYKNLQKYELALSDYS 1016

Query: 508  KTIALNPNFHVARAQRHFVWTSTLAELMAFSD 539
            K I +NP F  A   R  ++ +     +A SD
Sbjct: 1017 KAIDINPKFAEAYYNRGLLYYNQQKYDLALSD 1048



 Score = 80.5 bits (197), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 101/430 (23%), Positives = 181/430 (42%), Gaps = 67/430 (15%)

Query: 94   NHTKALARLLRATVYIFTSQSTKAIEDLTQLVEDTSVDPKIKVNAHIKRAVVHLHAASDF 153
            N   A+A   R  +Y    +   A+ D ++ ++   ++P   + A+  R V++    SD 
Sbjct: 784  NPNYAMAYNNRGNLYSDLQKYDLALSDYSKAID---INPNYAM-AYNNRGVLY----SDL 835

Query: 154  TK---AFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQ 210
             K   A +D  +A  ++PN A++Y  RG +Y    +Y+ AL +  K I +NPN+  A   
Sbjct: 836  QKYDLALSDYTKAIDINPNYAEAYVNRGVLYSDLQKYDLALSDYSKAIDINPNYAEAYVN 895

Query: 211  RHFVVHKMIVPGDRERVEQSLKEFRNFVDTHSNVVEACTLFAQVLVDQEDFDGAEEYFNR 270
            R  +   +      ++ E +L ++   +D + N  EA      +  + + ++ A   +++
Sbjct: 896  RGNLYKNL------QKYELALSDYSKAIDINPNYAEAYVNRGNLYKNLQKYELALSDYSK 949

Query: 271  SIRVDPENASLYVHRAMLMLQARGNVDEAIKLIEKAISIDKSCMFAYETLGTIEVQRGRL 330
            +I ++P +A +Y +R  L    +   D A+    KAI I+ +   AY   G +     + 
Sbjct: 950  AIDINPNDAKVYYNRGNLYYNQQ-KYDLALSDYSKAIEINPNYAKAYYNRGNLYKNLQKY 1008

Query: 331  EEAVKCFNKALPLARDEAELSHIYSLRDAAIAQMKVCERYNIKKKVSPRSQNITKNEKLA 390
            E A+  ++KA+ +    AE  +   L             YN +K              LA
Sbjct: 1009 ELALSDYSKAIDINPKFAEAYYNRGLL-----------YYNQQKY------------DLA 1045

Query: 391  IKQLRENNDIIIRPADKGGKTVVMDKADYTQKMTSILNSNDYEIIPGDPTKTIEESEKYG 450
            +    +  DI   P D G          Y  +     +   YE+   D +K I+ +  Y 
Sbjct: 1046 LSDFSKAIDI--NPNDAGA---------YNNRGNLYSDLQKYELALSDYSKAIDINPNYA 1094

Query: 451  NLENESG------QKH--AASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEA 502
            N     G      QK+  A SDF+KA         ++PN A +Y  R  +Y + GQ E+ 
Sbjct: 1095 NAYYNRGLLYYNQQKYDLALSDFSKAI-------DINPNDAGAYVSRSILYAILGQPEKV 1147

Query: 503  LRNLDKTIAL 512
              +L +   L
Sbjct: 1148 KIDLQQAAIL 1157



 Score = 63.2 bits (152), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 90/397 (22%), Positives = 168/397 (42%), Gaps = 72/397 (18%)

Query: 170 VADSYYQRGQIYCLFGQYEEALRNLDKTIALN--PNFHVARAQRHFVVHKMIVPGDR--- 224
            AD + +RG       ++EEA++  D+ I  N   N ++A   +   +  +    D+   
Sbjct: 527 TADIWIERGGQLWRLARHEEAIKAFDEAIKQNDPKNVYLAWYGKGLALGAL----DKDQP 582

Query: 225 --ERVEQSL------KEFRNFVDTHSNVVEACTLFAQVLVD-----------QEDFDGAE 265
             E ++Q++      ++ +NF   HS++++  +   + L D           +E+++ A 
Sbjct: 583 AIEALQQAINTLPKGEDLKNF---HSSILQRQSGVYRSLGDFSTSAGREREARENYEQAL 639

Query: 266 EYFNRSIRVDPENASLYVHRAMLMLQARGNVDEAIKLIEKAISIDKSCMFAYETLGTIEV 325
              N++I + P N + Y  +  ++ + +   DE +  I +AI +     + Y   G + +
Sbjct: 640 TVINQAISLLPNNPNYYNEKWAVLDKLK-RYDEGLAAITQAIDLAPRAAW-YSNRGNLYI 697

Query: 326 QRGRLEEAVKCFNKALPLARDEAELSHIYSLRDAAIAQMKVCERYNIKKKVSPRSQNITK 385
              + E A+  +NKA+ L  + A+  +                R N+ K       N+ K
Sbjct: 698 DLQKYELALSDWNKAIELNPNFADAYN---------------NRGNLYK-------NLQK 735

Query: 386 NEKLAIKQLRENNDIIIRPADKGGKTVVMDKADYTQKMTSILNSNDYEIIPGDPTKTIEE 445
            E LA+    +  DI  + A+            Y  +     N   YE+   D TK I+ 
Sbjct: 736 YE-LALSDYSKAIDINPKFAEA-----------YVNRGNLYKNLQKYELALSDYTKAIDI 783

Query: 446 SEKYGNLENESGQKHAASDFTK---AFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEA 502
           +  Y    N  G  +  SD  K   A +D  +A  ++PN A +Y  RG +Y    +Y+ A
Sbjct: 784 NPNYAMAYNNRGNLY--SDLQKYDLALSDYSKAIDINPNYAMAYNNRGVLYSDLQKYDLA 841

Query: 503 LRNLDKTIALNPNFHVARAQRHFVWTSTLAELMAFSD 539
           L +  K I +NPN+  A   R  +++      +A SD
Sbjct: 842 LSDYTKAIDINPNYAEAYVNRGVLYSDLQKYDLALSD 878


>gi|422338995|ref|ZP_16419955.1| tetratricopeptide repeat family protein [Fusobacterium nucleatum
           subsp. polymorphum F0401]
 gi|355372122|gb|EHG19465.1| tetratricopeptide repeat family protein [Fusobacterium nucleatum
           subsp. polymorphum F0401]
          Length = 652

 Score = 92.0 bits (227), Expect = 7e-16,   Method: Compositional matrix adjust.
 Identities = 90/369 (24%), Positives = 165/369 (44%), Gaps = 24/369 (6%)

Query: 160 LDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPN----FHVARAQRHFVV 215
           +DE E+ + N    YY RG  +   G++E+A++N DK I L+ N    ++  R   +F +
Sbjct: 1   MDEKEREELNY---YYNRGDTFFDLGKFEDAIQNYDKAIELDSNVNSVYYYNRGNAYFSL 57

Query: 216 HKMIVPGDRERVEQSLKEFRNFVDTHSNVVEACTLFAQVLVDQEDFDGAEEYFNRSIRVD 275
            K          E++++++   +D + N   + +           F+ A + +N++I ++
Sbjct: 58  GKF---------EEAIQDYNKAIDLNPNDDLSYSNRGNAYFSLGKFEDAIQDYNKAIDLN 108

Query: 276 PENASLYVHRAMLMLQARGNVDEAIKLIEKAISIDKSCMFAYETLGTIEVQRGRLEEAVK 335
           P NAS Y +R           ++AI+   K I ++ +  +AY   G         E+A+ 
Sbjct: 109 PNNASYYNNRGTTFTNLEK-YEDAIQDYNKTIDLNPNDNYAYFNRGAAFTYLNEYEKAIN 167

Query: 336 CFNKALPLARDEAELSHIYSLRDAAIAQMKVCER--YNIKKKVSPRSQNITK-NEKLAIK 392
            FNKA+ L  ++      Y  R  A   +   E+   +  K +   S N +  N +  + 
Sbjct: 168 DFNKAIDLNPND---DSAYFNRGTAFTNLSNYEKAINDFNKAIDLNSNNASYYNYRGTLY 224

Query: 393 QLRENNDIIIRPADKGGKTVVMDKADYTQKMTSILNSNDYEIIPGDPTKTIEESEKYGNL 452
             + N D  ++   K  +   +    Y+   +   N NDYE    +  K I+    + + 
Sbjct: 225 INQGNYDEAVKDFSKAIELNPIFVFGYSNLGSLYNNLNDYEKAIENLNKAIDLDPNFSDA 284

Query: 453 ENESGQKHAASD-FTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIA 511
            N  G  +   + F +A  D  +A +++PN  + YY  G +Y     YE+A+  L+K I 
Sbjct: 285 YNIRGITYVNQEKFDEAVKDFSKAIELNPNDKEYYYNLGILYIDLNNYEKAIETLNKAID 344

Query: 512 LNPNFHVAR 520
           L+PNF  AR
Sbjct: 345 LDPNFSDAR 353



 Score = 82.4 bits (202), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 67/282 (23%), Positives = 123/282 (43%), Gaps = 36/282 (12%)

Query: 104 RATVYIFTSQSTKAIEDLTQLVEDTSVDPKIKVNAHIKRAVVHLHAASDFTKAFADLDEA 163
           R   +    +   AI++  + +E   +D  +    +  R   +      F +A  D ++A
Sbjct: 15  RGDTFFDLGKFEDAIQNYDKAIE---LDSNVNSVYYYNRGNAYFSLGK-FEEAIQDYNKA 70

Query: 164 EKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPN---FHVARAQRHFVVHKM-- 218
             ++PN   SY  RG  Y   G++E+A+++ +K I LNPN   ++  R      + K   
Sbjct: 71  IDLNPNDDLSYSNRGNAYFSLGKFEDAIQDYNKAIDLNPNNASYYNNRGTTFTNLEKYED 130

Query: 219 ----------IVPGDR-------------ERVEQSLKEFRNFVDTHSNVVEACTLFAQVL 255
                     + P D                 E+++ +F   +D + N   A        
Sbjct: 131 AIQDYNKTIDLNPNDNYAYFNRGAAFTYLNEYEKAINDFNKAIDLNPNDDSAYFNRGTAF 190

Query: 256 VDQEDFDGAEEYFNRSIRVDPENASLYVHRAMLMLQARGNVDEAIKLIEKAISIDKSCMF 315
            +  +++ A   FN++I ++  NAS Y +R  L +  +GN DEA+K   KAI ++   +F
Sbjct: 191 TNLSNYEKAINDFNKAIDLNSNNASYYNYRGTLYIN-QGNYDEAVKDFSKAIELNPIFVF 249

Query: 316 AYETLGTIEVQRGRLEEAVKCFNKALPLARDEAELSHIYSLR 357
            Y  LG++       E+A++  NKA+ L   +   S  Y++R
Sbjct: 250 GYSNLGSLYNNLNDYEKAIENLNKAIDL---DPNFSDAYNIR 288



 Score = 72.0 bits (175), Expect = 8e-10,   Method: Compositional matrix adjust.
 Identities = 62/289 (21%), Positives = 130/289 (44%), Gaps = 15/289 (5%)

Query: 55  DTNESHELDLLSKAKRAFEHEDYLTAIRHCTEEIESTSSNHTKALARLLRATVYIFTSQS 114
           D N + +L   ++    F    +  AI+   + I+   +N   A     R T +    + 
Sbjct: 72  DLNPNDDLSYSNRGNAYFSLGKFEDAIQDYNKAIDLNPNN---ASYYNNRGTTFTNLEKY 128

Query: 115 TKAIEDLTQLVEDTSVDPKIKVNAHIKRAVVHLHAASDFTKAFADLDEAEKVDPNVADSY 174
             AI+D  + ++   ++P     A+  R     +  +++ KA  D ++A  ++PN   +Y
Sbjct: 129 EDAIQDYNKTID---LNPNDNY-AYFNRGAAFTYL-NEYEKAINDFNKAIDLNPNDDSAY 183

Query: 175 YQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQRHFVVHKMIVPGDRERVEQSLKEF 234
           + RG  +     YE+A+ + +K I LN N         +  ++  +  ++   ++++K+F
Sbjct: 184 FNRGTAFTNLSNYEKAINDFNKAIDLNSN------NASYYNYRGTLYINQGNYDEAVKDF 237

Query: 235 RNFVDTHSNVVEACTLFAQVLVDQEDFDGAEEYFNRSIRVDPENASLYVHRAMLMLQARG 294
              ++ +   V   +    +  +  D++ A E  N++I +DP  +  Y  R +  +    
Sbjct: 238 SKAIELNPIFVFGYSNLGSLYNNLNDYEKAIENLNKAIDLDPNFSDAYNIRGITYVNQEK 297

Query: 295 NVDEAIKLIEKAISIDKSCMFAYETLGTIEVQRGRLEEAVKCFNKALPL 343
             DEA+K   KAI ++ +    Y  LG + +     E+A++  NKA+ L
Sbjct: 298 -FDEAVKDFSKAIELNPNDKEYYYNLGILYIDLNNYEKAIETLNKAIDL 345



 Score = 54.3 bits (129), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 36/122 (29%), Positives = 65/122 (53%), Gaps = 9/122 (7%)

Query: 116 KAIEDLTQLVEDTSVDPKIKVNAHIKRAVVHLHAASDFTKAFADLDEAEKVDPNVADSYY 175
           KAIE+L + ++   +DP    +A+  R + +++    F +A  D  +A +++PN  + YY
Sbjct: 266 KAIENLNKAID---LDPNFS-DAYNIRGITYVNQEK-FDEAVKDFSKAIELNPNDKEYYY 320

Query: 176 QRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQRHFVV----HKMIVPGDRERVEQSL 231
             G +Y     YE+A+  L+K I L+PNF  AR     +     +K ++   +   +QS+
Sbjct: 321 NLGILYIDLNNYEKAIETLNKAIDLDPNFSDARNVIEIISTTQNNKKVIKFGKNGSKQSI 380

Query: 232 KE 233
           KE
Sbjct: 381 KE 382



 Score = 53.9 bits (128), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 44/172 (25%), Positives = 85/172 (49%), Gaps = 14/172 (8%)

Query: 76  DYLTAIRHCTEEIESTSSNHTKALARLLRATVYIFTSQSTKAIEDLTQLVEDTSVDPKIK 135
           +Y  AI    + I+  S+N   A     R T+YI      +A++D ++ +E   ++P I 
Sbjct: 195 NYEKAINDFNKAIDLNSNN---ASYYNYRGTLYINQGNYDEAVKDFSKAIE---LNP-IF 247

Query: 136 VNAHIKRAVVHLHAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLD 195
           V  +     ++ +  +D+ KA  +L++A  +DPN +D+Y  RG  Y    +++EA+++  
Sbjct: 248 VFGYSNLGSLY-NNLNDYEKAIENLNKAIDLDPNFSDAYNIRGITYVNQEKFDEAVKDFS 306

Query: 196 KTIALNPNFHVARAQRHFVVHKMIVPGDRERVEQSLKEFRNFVDTHSNVVEA 247
           K I LNPN       + +  +  I+  D    E++++     +D   N  +A
Sbjct: 307 KAIELNPN------DKEYYYNLGILYIDLNNYEKAIETLNKAIDLDPNFSDA 352



 Score = 44.7 bits (104), Expect = 0.14,   Method: Compositional matrix adjust.
 Identities = 23/60 (38%), Positives = 36/60 (60%), Gaps = 1/60 (1%)

Query: 465 FTKAFADLDEAEKVDPNVAD-SYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQR 523
           F  A  + D+A ++D NV    YY RG  Y   G++EEA+++ +K I LNPN  ++ + R
Sbjct: 25  FEDAIQNYDKAIELDSNVNSVYYYNRGNAYFSLGKFEEAIQDYNKAIDLNPNDDLSYSNR 84



 Score = 43.5 bits (101), Expect = 0.28,   Method: Compositional matrix adjust.
 Identities = 23/64 (35%), Positives = 36/64 (56%)

Query: 465 FTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQRH 524
           F  A  D ++A  ++PN A  Y  RG  +    +YE+A+++ +KTI LNPN + A   R 
Sbjct: 94  FEDAIQDYNKAIDLNPNNASYYNNRGTTFTNLEKYEDAIQDYNKTIDLNPNDNYAYFNRG 153

Query: 525 FVWT 528
             +T
Sbjct: 154 AAFT 157



 Score = 38.9 bits (89), Expect = 6.4,   Method: Compositional matrix adjust.
 Identities = 19/65 (29%), Positives = 34/65 (52%)

Query: 465 FTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQRH 524
           +  A  D ++   ++PN   +Y+ RG  +    +YE+A+ + +K I LNPN   A   R 
Sbjct: 128 YEDAIQDYNKTIDLNPNDNYAYFNRGAAFTYLNEYEKAINDFNKAIDLNPNDDSAYFNRG 187

Query: 525 FVWTS 529
             +T+
Sbjct: 188 TAFTN 192


>gi|425447216|ref|ZP_18827207.1| exported hypothetical protein [Microcystis aeruginosa PCC 9443]
 gi|389732284|emb|CCI03758.1| exported hypothetical protein [Microcystis aeruginosa PCC 9443]
          Length = 605

 Score = 92.0 bits (227), Expect = 7e-16,   Method: Compositional matrix adjust.
 Identities = 73/312 (23%), Positives = 148/312 (47%), Gaps = 19/312 (6%)

Query: 89  ESTSSNHTKALARLLRATVYIFTSQSTKAIEDLTQLVEDTSVDPKIKVNAHIKRAVVHLH 148
           +S+  N T A     +   Y   +Q  KAI   T+ +E   ++P+    A+  R +V+L+
Sbjct: 274 QSSQPNSTTAETYFKQGEDYRNNNQYDKAIAAYTKAIE---INPQY-AEAYKNRGIVYLY 329

Query: 149 AASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVAR 208
              D+ KA AD ++A +++P  +++Y  RG +Y    +Y++A+ + +K I +NP    A 
Sbjct: 330 L-KDYEKAMADNNKAIEINPQYSNAYNNRGNVYYKLKEYDKAMADYNKAIEINPQLFQAY 388

Query: 209 AQRHFVVHKMIVPGDRERVEQSLKEFRNFVDTHSNVVEACTLFAQVLVDQEDFDGAEEYF 268
             R    + +      +  ++++ ++   ++ +    EA      V  D +D++ A + +
Sbjct: 389 DNRGSFYYNL------KEYDKAIADYNKVIEINPQDAEAYYKRGYVYYDLKDYEKAIKDY 442

Query: 269 NRSIRVDPENASLYVHRAMLMLQARGNVDEAIKLIEKAISIDKSCMFAYETLGTIEVQRG 328
           N++I ++P+NA  Y  R       +   D+AIK   KAI I+     AY   G +     
Sbjct: 443 NKAIEINPQNADSYYLRGSFYYILK-EYDKAIKDYNKAIEINPQNAIAYNNRGYVYHNLK 501

Query: 329 RLEEAVKCFNKALPLARDEAELSHIYSLRDAAIAQMKVCER----YNIKKKVSPRSQNIT 384
             ++A+K +NKAL +     + +  Y  R      +K  ++    YN   +++P+  +  
Sbjct: 502 EYDKAIKDYNKALEI---NPQYADAYYTRGNVYLHLKEYDKAIKDYNKAIEINPQYADAY 558

Query: 385 KNEKLAIKQLRE 396
            N  +  + L++
Sbjct: 559 NNRGVVYEILKD 570



 Score = 87.0 bits (214), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 54/213 (25%), Positives = 115/213 (53%), Gaps = 12/213 (5%)

Query: 104 RATVYIFTSQSTKAIEDLTQLVEDTSVDPKIKVNAHIKRAVVHLHAASDFTKAFADLDEA 163
           R + Y    +  KAI D  +++E   ++P+    A+ KR  V+ +   D+ KA  D ++A
Sbjct: 391 RGSFYYNLKEYDKAIADYNKVIE---INPQ-DAEAYYKRGYVY-YDLKDYEKAIKDYNKA 445

Query: 164 EKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQRHFVVHKMIVPGD 223
            +++P  ADSYY RG  Y +  +Y++A+++ +K I +NP   +A   R +V H +     
Sbjct: 446 IEINPQNADSYYLRGSFYYILKEYDKAIKDYNKAIEINPQNAIAYNNRGYVYHNL----- 500

Query: 224 RERVEQSLKEFRNFVDTHSNVVEACTLFAQVLVDQEDFDGAEEYFNRSIRVDPENASLYV 283
            +  ++++K++   ++ +    +A      V +  +++D A + +N++I ++P+ A  Y 
Sbjct: 501 -KEYDKAIKDYNKALEINPQYADAYYTRGNVYLHLKEYDKAIKDYNKAIEINPQYADAYN 559

Query: 284 HRAMLMLQARGNVDEAIKLIEKAISIDKSCMFA 316
           +R ++  +   + ++AIK   KA+ I+    +A
Sbjct: 560 NRGVVY-EILKDYEKAIKDYNKALEINPQHPYA 591



 Score = 72.0 bits (175), Expect = 8e-10,   Method: Compositional matrix adjust.
 Identities = 83/384 (21%), Positives = 159/384 (41%), Gaps = 88/384 (22%)

Query: 151 SDFTKAFADLDEAEKVDPN--VADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVAR 208
            DF+  F  +  A+   PN   A++Y+++G+ Y    QY++A+    K I +NP +  A 
Sbjct: 263 GDFS--FNPVTVAQSSQPNSTTAETYFKQGEDYRNNNQYDKAIAAYTKAIEINPQYAEAY 320

Query: 209 AQRHFVVHKMIVPGDRERVEQSLKEFRNFVDTHSNVVEACTLFAQVLVDQEDFDGAEEYF 268
             R  V   +                                        +D++ A    
Sbjct: 321 KNRGIVYLYL----------------------------------------KDYEKAMADN 340

Query: 269 NRSIRVDPENASLYVHRAMLMLQARGNVDEAIKLIEKAISIDKSCMFAYETLGTIEVQRG 328
           N++I ++P+ ++ Y +R  +  + +   D+A+    KAI I+     AY+  G+      
Sbjct: 341 NKAIEINPQYSNAYNNRGNVYYKLK-EYDKAMADYNKAIEINPQLFQAYDNRGSFYYNLK 399

Query: 329 RLEEAVKCFNKALPLARDEAELSH-----IYSLRDAAIAQMKVCERYNIKKKVSPRSQNI 383
             ++A+  +NK + +   +AE  +      Y L+D      K  + YN   +++P++ + 
Sbjct: 400 EYDKAIADYNKVIEINPQDAEAYYKRGYVYYDLKDYE----KAIKDYNKAIEINPQNADS 455

Query: 384 TKNEKLAIKQLRENNDIIIRPADKGGKTVVMDKADYTQKMTSILNSNDYEIIPGDPTKTI 443
                     LR +   I++  DK  K       DY + +         EI P +     
Sbjct: 456 Y--------YLRGSFYYILKEYDKAIK-------DYNKAI---------EINPQNAIAYN 491

Query: 444 EESEKYGNLENESGQKHAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEAL 503
                Y NL+          ++ KA  D ++A +++P  AD+YY RG +Y    +Y++A+
Sbjct: 492 NRGYVYHNLK----------EYDKAIKDYNKALEINPQYADAYYTRGNVYLHLKEYDKAI 541

Query: 504 RNLDKTIALNPNFHVARAQRHFVW 527
           ++ +K I +NP +  A   R  V+
Sbjct: 542 KDYNKAIEINPQYADAYNNRGVVY 565


>gi|75910689|ref|YP_324985.1| hypothetical protein Ava_4492 [Anabaena variabilis ATCC 29413]
 gi|75704414|gb|ABA24090.1| TPR repeat protein [Anabaena variabilis ATCC 29413]
          Length = 605

 Score = 92.0 bits (227), Expect = 8e-16,   Method: Compositional matrix adjust.
 Identities = 83/375 (22%), Positives = 169/375 (45%), Gaps = 18/375 (4%)

Query: 151 SDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQ 210
            ++ +A AD + A ++DPN+A++Y  RG  Y   G Y++A+ + ++T+ +NP+   A   
Sbjct: 195 GEYRQAIADHERAVQLDPNLAEAYQNRGNAYYALGAYQKAIADYNRTLEINPHQVGAYYN 254

Query: 211 RHFVVHKMIVPGDRERVEQSLKEFRNFVDTHSNVVEACTLFAQVLVDQEDFDGAEEYFNR 270
           R  +   +         +Q+  +F   +  +S   +A      +    +D+  A   +N+
Sbjct: 255 RGLISFYL------NEYQQAFADFNQVLSFNSKDAQAYYQRGLIYEAWQDYQSALADYNQ 308

Query: 271 SIRVDPENASLYVHRAMLMLQARGNVDEAIKLIEKAISIDKSCMFAYETLGTIEVQRGRL 330
           +++++PE A +Y  RA +     G+   A+    + + +  +    Y   GT     G  
Sbjct: 309 ALQLNPELAVVYGVRANIHRHL-GDYPSALADGNRLLQLQPNFAAGYCDRGTSRRCLGDY 367

Query: 331 EEAVKCFNKALPLARDEAELSHIYSLRDAAIAQM-KVCERYNIKKKVSPRSQNITKNEKL 389
             A+  +N+AL +  + AE  +  ++   A+  +      Y    ++SP       N   
Sbjct: 368 RGAITDYNQALQINPNIAEAYYGRAIAHEALQDLIGAIADYTHSIRISPDFAPAYCNRGN 427

Query: 390 AIKQLRENNDIIIRPADKGGKTVVMDKAD--YTQKMTSILNSNDYEIIPGDPTKTIE--- 444
           A +QL +    +   AD      +  +    Y  + +   +  +Y     D T+ +E   
Sbjct: 428 ARRQLGDTKGAL---ADYNQALTINTQLSEAYYNRGSLHYDQQNYRSAIADYTQALELQP 484

Query: 445 ESEKYGNLENESGQKHAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALR 504
           ES +Y    + +  ++A  D+  A AD  ++  ++P  A+ +Y RG+ Y L G  EEAL 
Sbjct: 485 ESARY--YSDRAHARYALQDYQGAVADYTQSIAINPGYAEDWYNRGRSYLLLGYLEEALA 542

Query: 505 NLDKTIALNPNFHVA 519
           +L++ +   P++  A
Sbjct: 543 DLNQALKFQPHWASA 557



 Score = 72.4 bits (176), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 87/408 (21%), Positives = 166/408 (40%), Gaps = 64/408 (15%)

Query: 134 IKVNAHIKRAVVHLHAA----SDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEE 189
           +++N +  +A  H   A    +DFT A AD D+A +++P  A+ YY RG  Y   G Y++
Sbjct: 64  VEINPNYAQAYYHRGNARYCLADFTAAIADYDQALQINPTFAEYYYCRGNAYLAQGDYDQ 123

Query: 190 ALRNLDKTIALNP------NFHVARAQRHFVVHKMIVPGDRERV---EQSLKEFRNFVDT 240
           A+ N   TI  +P      N  +A A  +  +H       +E +   +Q+L+    F   
Sbjct: 124 AIANYISTIEFDPLLASNINEDIANAYYYRGLHNSDHGNYQEAIIDLQQALQWHPYFAAA 183

Query: 241 HS---NVVEACTLFAQVLVDQEDFDGAEEYFNRSIRVDPENASLYVHRAMLMLQARGNVD 297
           +S   N+      + Q + D E          R++++DP  A  Y +R      A G   
Sbjct: 184 YSIRGNIYYKLGEYRQAIADHE----------RAVQLDPNLAEAYQNRGNAYY-ALGAYQ 232

Query: 298 EAIKLIEKAISIDKSCMFAYETLGTIEVQRGRLEEAVKCFNKALPLARDEAELSHIYSLR 357
           +AI    + + I+   + AY   G I       ++A   FN+ L     +A+  +   L 
Sbjct: 233 KAIADYNRTLEINPHQVGAYYNRGLISFYLNEYQQAFADFNQVLSFNSKDAQAYYQRGL- 291

Query: 358 DAAIAQMKVCERY-NIKKKVSPRSQNITKNEKLAIKQLRENNDIIIRPADKGGKTVVMDK 416
                   + E + + +  ++  +Q +  N +LA+                    V   +
Sbjct: 292 --------IYEAWQDYQSALADYNQALQLNPELAV--------------------VYGVR 323

Query: 417 ADYTQKMTSILNSNDYEIIPGDPTKTIEESEKYGNLENESG-QKHAASDFTKAFADLDEA 475
           A+  + +       DY     D  + ++    +     + G  +    D+  A  D ++A
Sbjct: 324 ANIHRHL------GDYPSALADGNRLLQLQPNFAAGYCDRGTSRRCLGDYRGAITDYNQA 377

Query: 476 EKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQR 523
            +++PN+A++YY R   +        A+ +   +I ++P+F  A   R
Sbjct: 378 LQINPNIAEAYYGRAIAHEALQDLIGAIADYTHSIRISPDFAPAYCNR 425



 Score = 62.8 bits (151), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 89/397 (22%), Positives = 150/397 (37%), Gaps = 78/397 (19%)

Query: 133 KIKVNAHIKRAVVHLHAASDFTKAFADLDEAEKVDPNVADSYYQRGQI-YCLFGQYEEAL 191
           K+    + KR +       D+  A A  + A +++PN A +YY RG   YCL   +  A+
Sbjct: 33  KVDAETYCKRGITFSRELKDYQGAIAFFNLAVEINPNYAQAYYHRGNARYCL-ADFTAAI 91

Query: 192 RNLDKTIALNPNFHVARAQRHFV-VHKMIVPGDRERVEQSLKEFRNFVDTHSNVVEACTL 250
            + D+ + +NP F    A+ ++   +  +  GD ++         N++ T    +E    
Sbjct: 92  ADYDQALQINPTF----AEYYYCRGNAYLAQGDYDQA------IANYIST----IE---- 133

Query: 251 FAQVLVDQEDFDGAEEYFNRSIRVDPENASLYVHRAMLMLQARGNVDEAIKLIEKAISID 310
           F  +L    + D A  Y+ R +                     GN  EAI  +++A+   
Sbjct: 134 FDPLLASNINEDIANAYYYRGLHNSDH----------------GNYQEAIIDLQQALQWH 177

Query: 311 KSCMFAYETLGTIEVQRGRLEEAVKCFNKALPLARDEAELSHIYSLRDAAI----AQMKV 366
                AY   G I  + G   +A+    +A+ L   +  L+  Y  R  A     A  K 
Sbjct: 178 PYFAAAYSIRGNIYYKLGEYRQAIADHERAVQL---DPNLAEAYQNRGNAYYALGAYQKA 234

Query: 367 CERYNIKKKVSPRSQNITKNEKLAIKQLRENNDIIIRPADKGGKTVVMDKADYTQKMTSI 426
              YN   +++P       N  L    L E                    AD+ Q ++  
Sbjct: 235 IADYNRTLEINPHQVGAYYNRGLISFYLNEYQQAF---------------ADFNQVLS-- 277

Query: 427 LNSNDYEIIPGDPTKTIEESEKYGNLENESGQKHAASDFTKAFADLDEAEKVDPNVADSY 486
            NS D             ++     L  E+ Q     D+  A AD ++A +++P +A  Y
Sbjct: 278 FNSKD------------AQAYYQRGLIYEAWQ-----DYQSALADYNQALQLNPELAVVY 320

Query: 487 YQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQR 523
             R  I+   G Y  AL + ++ + L PNF      R
Sbjct: 321 GVRANIHRHLGDYPSALADGNRLLQLQPNFAAGYCDR 357



 Score = 51.2 bits (121), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 53/237 (22%), Positives = 98/237 (41%), Gaps = 22/237 (9%)

Query: 117 AIEDLTQLVEDTSVDPKIKVNAHIKRAVVHLHAASDFTKAFADLDEAEKVDPNVADSYYQ 176
           AI D  Q ++   ++P I   A+  RA+ H  A  D   A AD   + ++ P+ A +Y  
Sbjct: 370 AITDYNQALQ---INPNI-AEAYYGRAIAH-EALQDLIGAIADYTHSIRISPDFAPAYCN 424

Query: 177 RGQIYCLFGQYEEALRNLDKTIALNPNFHVA---RAQRHFVVHKMIVPGDRERVEQSLKE 233
           RG      G  + AL + ++ + +N     A   R   H+         D++    ++ +
Sbjct: 425 RGNARRQLGDTKGALADYNQALTINTQLSEAYYNRGSLHY---------DQQNYRSAIAD 475

Query: 234 FRNFVDTHSNVVEACTLFAQVLVDQEDFDGAEEYFNRSIRVDPENASLYVHRA--MLMLQ 291
           +   ++         +  A      +D+ GA   + +SI ++P  A  + +R    L+L 
Sbjct: 476 YTQALELQPESARYYSDRAHARYALQDYQGAVADYTQSIAINPGYAEDWYNRGRSYLLL- 534

Query: 292 ARGNVDEAIKLIEKAISIDKSCMFAYETLGTIEVQRGRLEEAVKCFNKALPLARDEA 348
             G ++EA+  + +A+        AY     I   RG  + A+  F K+  L   E 
Sbjct: 535 --GYLEEALADLNQALKFQPHWASAYLLRADILRNRGDYQAAITDFQKSADLYSQEG 589



 Score = 46.6 bits (109), Expect = 0.033,   Method: Compositional matrix adjust.
 Identities = 34/140 (24%), Positives = 65/140 (46%), Gaps = 13/140 (9%)

Query: 104 RATVYIFTSQSTKAIEDLTQLVEDTSVDPKIKVN-AHIKRAVVHLHAASDFTKAFADLDE 162
           R +++        AI D TQ +E      +   + AH + A+       D+  A AD  +
Sbjct: 459 RGSLHYDQQNYRSAIADYTQALELQPESARYYSDRAHARYAL------QDYQGAVADYTQ 512

Query: 163 AEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQRHFVVHKMIVPG 222
           +  ++P  A+ +Y RG+ Y L G  EEAL +L++ +   P++  A   R  ++       
Sbjct: 513 SIAINPGYAEDWYNRGRSYLLLGYLEEALADLNQALKFQPHWASAYLLRADILR------ 566

Query: 223 DRERVEQSLKEFRNFVDTHS 242
           +R   + ++ +F+   D +S
Sbjct: 567 NRGDYQAAITDFQKSADLYS 586



 Score = 41.6 bits (96), Expect = 1.1,   Method: Compositional matrix adjust.
 Identities = 29/130 (22%), Positives = 61/130 (46%), Gaps = 6/130 (4%)

Query: 411 TVVMDKADYTQKMTSILNSNDYE-IIPGDPTKTIEESEKYGNLENESGQKHAASDFTKAF 469
              + + DY Q + + +++ +++ ++  +  + I  +  Y  L N         ++ +A 
Sbjct: 113 NAYLAQGDYDQAIANYISTIEFDPLLASNINEDIANAYYYRGLHNSD-----HGNYQEAI 167

Query: 470 ADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQRHFVWTS 529
            DL +A +  P  A +Y  RG IY   G+Y +A+ + ++ + L+PN   A   R   + +
Sbjct: 168 IDLQQALQWHPYFAAAYSIRGNIYYKLGEYRQAIADHERAVQLDPNLAEAYQNRGNAYYA 227

Query: 530 TLAELMAFSD 539
             A   A +D
Sbjct: 228 LGAYQKAIAD 237



 Score = 40.8 bits (94), Expect = 1.8,   Method: Compositional matrix adjust.
 Identities = 53/276 (19%), Positives = 111/276 (40%), Gaps = 40/276 (14%)

Query: 259 EDFDGAEEYFNRSIRVDPENASLYVHRAMLMLQARGNVDEAIKLIEKAISIDKSCMFAYE 318
           +D+ GA  +FN ++ ++P  A  Y HR         +   AI   ++A+ I+ +    Y 
Sbjct: 51  KDYQGAIAFFNLAVEINPNYAQAYYHRGNARY-CLADFTAAIADYDQALQINPTFAEYYY 109

Query: 319 TLGTIEVQRGRLEEAVKCFNKAL---PL--ARDEAELSHIYSLRDAAIAQMKVCERYNIK 373
             G   + +G  ++A+  +   +   PL  +    ++++ Y  R      +   +  N +
Sbjct: 110 CRGNAYLAQGDYDQAIANYISTIEFDPLLASNINEDIANAYYYRG-----LHNSDHGNYQ 164

Query: 374 KKVSPRSQNITKNEKLAIK-QLRENNDIIIRPADKGGKTVVMDKADYTQKMTSILNSNDY 432
           + +    Q +  +   A    +R N              +     +Y Q +       D+
Sbjct: 165 EAIIDLQQALQWHPYFAAAYSIRGN--------------IYYKLGEYRQAIA------DH 204

Query: 433 E-IIPGDPTKTIEESEKYGNLENESGQKHAASDFTKAFADLDEAEKVDPNVADSYYQRGQ 491
           E  +  DP      +E Y   +N     +A   + KA AD +   +++P+   +YY RG 
Sbjct: 205 ERAVQLDPNL----AEAY---QNRGNAYYALGAYQKAIADYNRTLEINPHQVGAYYNRGL 257

Query: 492 IYCLFGQYEEALRNLDKTIALNPNFHVARAQRHFVW 527
           I     +Y++A  + ++ ++ N     A  QR  ++
Sbjct: 258 ISFYLNEYQQAFADFNQVLSFNSKDAQAYYQRGLIY 293


>gi|427730483|ref|YP_007076720.1| Tfp pilus assembly protein PilF [Nostoc sp. PCC 7524]
 gi|427366402|gb|AFY49123.1| Tfp pilus assembly protein PilF [Nostoc sp. PCC 7524]
          Length = 604

 Score = 91.7 bits (226), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 94/396 (23%), Positives = 173/396 (43%), Gaps = 18/396 (4%)

Query: 133 KIKVNAHIKRAVVHLHAA----SDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYE 188
            +++N H   A  H   A    +D+++A AD  +A  ++P  A+SYY RG+ Y   G Y+
Sbjct: 63  SVEINPHFAEAYYHRGNARYCLADYSRAIADYHQALDINPTFAESYYCRGRAYFAVGDYD 122

Query: 189 EALRNLDKTIALNPNF--HVARAQRHFVVHKMIVPGDRERVEQSLKEFRNFVDTHSNVVE 246
           +A+ +   TI +NP    H+     +   H+ IV        +++ +F+  +  H  +  
Sbjct: 123 QAIADYINTIEVNPQLASHINLDIANAYYHRGIVHNGCGDYPEAIADFQQALQWHPYLAA 182

Query: 247 ACTLFAQVLVDQEDFDGAEEYFNRSIRVDPENASLYVHRAMLMLQARGNVDEAIKLIEKA 306
           A +    V  +  ++  A     R+I++DP  A  Y +R  +     G+   AI+    A
Sbjct: 183 AYSSRGVVYHNLGEYQQAIADHKRAIQLDPNLAEAYHNRGNVYY-VLGDYPAAIRDYNHA 241

Query: 307 ISIDKSCMFAYETLGTIEVQRGRLEEAVKCFNKALPLARDEAELSHIYSL-RDAAIAQMK 365
           I I+ +   AY   G I  ++     A++ FN+AL L  ++A+      L R+       
Sbjct: 242 IEINPNLATAYYNRGAIRSRQKEYHLALEDFNQALKLNPEDAQAYAERGLIREVRGDYQG 301

Query: 366 VCERYNIKKKVSPRSQNITKNEKLAIKQLRENNDIIIRPADKGGKTVVMDK--ADYTQKM 423
               YN   +++P    +        +QL +    +   AD      +  +  A Y  + 
Sbjct: 302 AIADYNQALQINPYLVLVYGFRANVRRQLGDYPGAL---ADSNQLLTLHPQLAAGYCDRA 358

Query: 424 TSILNSNDYEIIPGDPTKTIEESEKYGNLENESGQ---KHAASDFTKAFADLDEAEKVDP 480
           T+  +  DY+    D  + ++ +     +E   G+     A  DF  A AD  +A +  P
Sbjct: 359 TARRHLGDYQGAISDYNQALQINPNL--VEAYYGRAITHEALQDFLGAIADNTQAIRFAP 416

Query: 481 NVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNF 516
           + A +Y  RG +    G +  AL + ++ +A+NPN 
Sbjct: 417 DFAPAYCNRGNVRRQLGDHRGALADYNQALAINPNL 452



 Score = 87.8 bits (216), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 111/505 (21%), Positives = 201/505 (39%), Gaps = 103/505 (20%)

Query: 55  DTNESHELDLLSKAKRAFEHEDYLTAIRHCTEEIE-----STSSNHTKALARLLRATVYI 109
           D N +       + +  F   DY  AI      IE     ++  N   A A   R  V+ 
Sbjct: 99  DINPTFAESYYCRGRAYFAVGDYDQAIADYINTIEVNPQLASHINLDIANAYYHRGIVHN 158

Query: 110 FTSQSTKAIEDLTQLVEDTSVDPKIKVNAHIKRAVVHLHAASDFTKAFADLDEAEKVDPN 169
                 +AI D  Q ++     P +   A+  R VV+ H   ++ +A AD   A ++DPN
Sbjct: 159 GCGDYPEAIADFQQALQ---WHPYLAA-AYSSRGVVY-HNLGEYQQAIADHKRAIQLDPN 213

Query: 170 VADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQRHFVVHKMIVPGDRERVEQ 229
           +A++Y+ RG +Y + G Y  A+R+ +  I +NPN   A   R  +         R R   
Sbjct: 214 LAEAYHNRGNVYYVLGDYPAAIRDYNHAIEINPNLATAYYNRGAI---------RSR--- 261

Query: 230 SLKEFRNFVDTHSNVVEACTLFAQVLVDQEDFDGAEEYFNRSIRVDPENASLYVHRAMLM 289
                                       Q+++  A E FN++++++PE+A  Y  R  L+
Sbjct: 262 ----------------------------QKEYHLALEDFNQALKLNPEDAQAYAERG-LI 292

Query: 290 LQARGNVDEAIKLIEKAISIDKSCMFAYETLGTIEVQRGRLEEAVKCFNKALPLARDEAE 349
            + RG+   AI    +A+ I+   +  Y     +  Q G    A+   N+ L L     +
Sbjct: 293 REVRGDYQGAIADYNQALQINPYLVLVYGFRANVRRQLGDYPGALADSNQLLTL---HPQ 349

Query: 350 LSHIYSLRDAAIAQMKVCERYNIKKKVSPRSQNITK-NEKLAIKQLRENNDIIIRPADKG 408
           L+  Y            C+R   ++ +      I+  N+ L I     N +++       
Sbjct: 350 LAAGY------------CDRATARRHLGDYQGAISDYNQALQI-----NPNLV------- 385

Query: 409 GKTVVMDKADYTQKMTSILNSNDYEIIPGDPTKTIEESEKY-------GNLENESGQKHA 461
                  +A Y + +T      D+     D T+ I  +  +       GN+  + G    
Sbjct: 386 -------EAYYGRAITHEA-LQDFLGAIADNTQAIRFAPDFAPAYCNRGNVRRQLG---- 433

Query: 462 ASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPN---FHV 518
             D   A AD ++A  ++PN+ +SY+ RG ++     Y+EA+ +  + + +NP    F+ 
Sbjct: 434 --DHRGALADYNQALAINPNLVESYFNRGALHYAQQNYQEAIADYTQALEINPQSALFYS 491

Query: 519 ARAQRHFVWTSTLAELMAFSDEFMI 543
            RA  ++        +  ++   +I
Sbjct: 492 HRANSYYALNQYHQAIADYTQAILI 516



 Score = 47.8 bits (112), Expect = 0.015,   Method: Compositional matrix adjust.
 Identities = 24/72 (33%), Positives = 41/72 (56%), Gaps = 6/72 (8%)

Query: 459 KHAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNP---- 514
           ++  +D+++A AD  +A  ++P  A+SYY RG+ Y   G Y++A+ +   TI +NP    
Sbjct: 81  RYCLADYSRAIADYHQALDINPTFAESYYCRGRAYFAVGDYDQAIADYINTIEVNPQLAS 140

Query: 515 --NFHVARAQRH 524
             N  +A A  H
Sbjct: 141 HINLDIANAYYH 152


>gi|385305167|gb|EIF49158.1| tom70 [Dekkera bruxellensis AWRI1499]
          Length = 597

 Score = 91.7 bits (226), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 67/231 (29%), Positives = 110/231 (47%), Gaps = 11/231 (4%)

Query: 151 SDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQ 210
            D+T+A A+  +A K++P   D YY   QI+ L G   +A  N +K I LN     A  Q
Sbjct: 359 GDYTEANANFSKAIKLNPXDPDIYYHYAQIFYLVGDLAKAKTNFEKCINLNSKNIYAHIQ 418

Query: 211 RHFVVHKMIVPGDRERVEQSLKEFRNFVDTHSNVVEACTLFAQVLVDQEDFDGAEEYFNR 270
              + ++    GD  +      E R    T     E    + ++L D++DFDGA + F  
Sbjct: 419 LACLAYRQ---GDSNKCNSLFDEARKMFPTSP---EIPNYYGEILFDRQDFDGALKQFGI 472

Query: 271 SIRVDPENASLYVHRAML-----MLQARGNVDEAIKLIEKAISIDKSCMFAYETLGTIEV 325
           SI++        +    L     + Q +G  +++IKL++ A  +D     A  +LG   +
Sbjct: 473 SIKLQKAGKGYSIGALPLVNESAIYQRKGETEKSIKLLKDACELDPKSEVARLSLGQAFL 532

Query: 326 QRGRLEEAVKCFNKALPLARDEAELSHIYSLRDAAIAQMKVCERYNIKKKV 376
               ++EA+K F++A  LAR   E +   SL +A+  Q+K+ E   + KKV
Sbjct: 533 AEQNVDEAIKLFDEACTLARSSEERTQAISLMEASKMQLKIREDPVLSKKV 583



 Score = 38.5 bits (88), Expect = 8.4,   Method: Compositional matrix adjust.
 Identities = 20/51 (39%), Positives = 29/51 (56%)

Query: 463 SDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALN 513
            D+T+A A+  +A K++P   D YY   QI+ L G   +A  N +K I LN
Sbjct: 359 GDYTEANANFSKAIKLNPXDPDIYYHYAQIFYLVGDLAKAKTNFEKCINLN 409


>gi|354566722|ref|ZP_08985893.1| Tetratricopeptide TPR_1 repeat-containing protein [Fischerella sp.
           JSC-11]
 gi|353544381|gb|EHC13835.1| Tetratricopeptide TPR_1 repeat-containing protein [Fischerella sp.
           JSC-11]
          Length = 1272

 Score = 91.7 bits (226), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 71/289 (24%), Positives = 128/289 (44%), Gaps = 6/289 (2%)

Query: 239 DTHSNVVEACTLFAQVLVDQE--DFDGAEEYFNRSIRVDPENASLYVHRAMLMLQARGNV 296
           +++ N V+A   F + L   +  D  GA  Y+N+S+ + P+    + +R + +    GN 
Sbjct: 299 ESNGNSVQAEAWFYEGLQQAKIGDLAGALTYYNKSVELKPDAYEYWFNRGLTLFYL-GNF 357

Query: 297 DEAIKLIEKAISIDKSCMFAYETLGTIEVQRGRLEEAVKCFNKALPLARDEAELSHIYSL 356
            EAI   ++AI I       +   G    + G   EA+  F++AL L  D  E      L
Sbjct: 358 PEAIASYDRAIGIKPDFYKGWYNRGAALSELGNFTEAIASFDEALKLKHDYHEAWSGRGL 417

Query: 357 RDAAIAQM-KVCERYNIKKKVSPRSQNITKNEKLAIKQLRENNDIIIRPADKGGKTVVMD 415
               + Q+ +    ++   ++ P    I      A+ +  +N+D I   A         D
Sbjct: 418 VQLKLGQLSEAIASFDASLQLQPHDPEIWYFRGTALAEAGQNHDAIACYAQALEYHPEFD 477

Query: 416 KADYTQKMTSILNSNDYEIIPGDPTKTIE-ESEKYGNLENESGQKHAASDFTKAFADLDE 474
            A Y ++  ++ N  D+E    +  + I+   E Y      +G +    +  +A A  D 
Sbjct: 478 LAWY-KRGVALFNIGDWEEAIANYHQAIQINPECYQAWYGLAGVQEKLGNIQEAIAAYDR 536

Query: 475 AEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQR 523
           + ++ PN  +++  RG I    G +EEA+ + DK IA+NPNF++    R
Sbjct: 537 STQIQPNFHEAWIDRGVILASLGNWEEAIASWDKAIAINPNFYLTWFNR 585



 Score = 60.1 bits (144), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 48/209 (22%), Positives = 94/209 (44%), Gaps = 8/209 (3%)

Query: 138 AHIKRAVVHLHAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKT 197
           A   R +V L      ++A A  D + ++ P+  + +Y RG      GQ  +A+    + 
Sbjct: 411 AWSGRGLVQLKLG-QLSEAIASFDASLQLQPHDPEIWYFRGTALAEAGQNHDAIACYAQA 469

Query: 198 IALNPNFHVARAQRHFVVHKMIVPGDRERVEQSLKEFRNFVDTHSNVVEACTLFAQVLVD 257
           +  +P F +A  +R   +  +   GD E   +++  +   +  +    +A    A V   
Sbjct: 470 LEYHPEFDLAWYKRGVALFNI---GDWE---EAIANYHQAIQINPECYQAWYGLAGVQEK 523

Query: 258 QEDFDGAEEYFNRSIRVDPENASLYVHRAMLMLQARGNVDEAIKLIEKAISIDKSCMFAY 317
             +   A   ++RS ++ P     ++ R ++ L + GN +EAI   +KAI+I+ +    +
Sbjct: 524 LGNIQEAIAAYDRSTQIQPNFHEAWIDRGVI-LASLGNWEEAIASWDKAIAINPNFYLTW 582

Query: 318 ETLGTIEVQRGRLEEAVKCFNKALPLARD 346
              G      GR EEA+  ++KA+ +  D
Sbjct: 583 FNRGVALDNLGRREEAIASYDKAIEIESD 611



 Score = 57.4 bits (137), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 39/190 (20%), Positives = 83/190 (43%), Gaps = 7/190 (3%)

Query: 151 SDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQ 210
            +F +A A  D A  + P+    +Y RG      G + EA+ + D+ + L  ++H A + 
Sbjct: 355 GNFPEAIASYDRAIGIKPDFYKGWYNRGAALSELGNFTEAIASFDEALKLKHDYHEAWSG 414

Query: 211 RHFVVHKMIVPGDRERVEQSLKEFRNFVDTHSNVVEACTLFAQVLVDQEDFDGAEEYFNR 270
           R  V  K+       ++ +++  F   +    +  E        L +      A   + +
Sbjct: 415 RGLVQLKL------GQLSEAIASFDASLQLQPHDPEIWYFRGTALAEAGQNHDAIACYAQ 468

Query: 271 SIRVDPENASLYVHRAMLMLQARGNVDEAIKLIEKAISIDKSCMFAYETLGTIEVQRGRL 330
           ++   PE    +  R + +    G+ +EAI    +AI I+  C  A+  L  ++ + G +
Sbjct: 469 ALEYHPEFDLAWYKRGVALFNI-GDWEEAIANYHQAIQINPECYQAWYGLAGVQEKLGNI 527

Query: 331 EEAVKCFNKA 340
           +EA+  ++++
Sbjct: 528 QEAIAAYDRS 537



 Score = 53.9 bits (128), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 44/194 (22%), Positives = 85/194 (43%), Gaps = 7/194 (3%)

Query: 156 AFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQRHFVV 215
           A A   +A +  P    ++Y+RG      G +EEA+ N  + I +NP  + A      V 
Sbjct: 462 AIACYAQALEYHPEFDLAWYKRGVALFNIGDWEEAIANYHQAIQINPECYQAWYGLAGVQ 521

Query: 216 HKMIVPGDRERVEQSLKEFRNFVDTHSNVVEACTLFAQVLVDQEDFDGAEEYFNRSIRVD 275
            K+        +++++  +        N  EA      +L    +++ A   ++++I ++
Sbjct: 522 EKL------GNIQEAIAAYDRSTQIQPNFHEAWIDRGVILASLGNWEEAIASWDKAIAIN 575

Query: 276 PENASLYVHRAMLMLQARGNVDEAIKLIEKAISIDKSCMFAYETLGTIEVQRGRLEEAVK 335
           P     + +R +  L   G  +EAI   +KAI I+     A+   G  +   G+ EEA+ 
Sbjct: 576 PNFYLTWFNRGV-ALDNLGRREEAIASYDKAIEIESDFYLAWYNRGVAQFYLGQYEEAII 634

Query: 336 CFNKALPLARDEAE 349
            ++ +L +  D  E
Sbjct: 635 SYDGSLKIKPDYWE 648



 Score = 50.8 bits (120), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 78/427 (18%), Positives = 169/427 (39%), Gaps = 49/427 (11%)

Query: 99  LARLLRATVYIFTSQSTKAIEDLTQLVEDTSVDPKIKVNAHIKRAVVHLHAASDFTKAFA 158
           L + L   + I T+ +   IE L+      SV  +      +++A +      D   A  
Sbjct: 274 LVQQLAVGLGIQTTDTHAIIEALSDESNGNSVQAEAWFYEGLQQAKI-----GDLAGALT 328

Query: 159 DLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQRHFVVHKM 218
             +++ ++ P+  + ++ RG      G + EA+ + D+ I + P+F+     R   + ++
Sbjct: 329 YYNKSVELKPDAYEYWFNRGLTLFYLGNFPEAIASYDRAIGIKPDFYKGWYNRGAALSEL 388

Query: 219 IVPGDRERVEQSLKEFRNFVDTHSNVVEACTLFAQVLVDQEDFDGAEEYFNRSIRVDPEN 278
                     +++  F   +    +  EA +    V +       A   F+ S+++ P +
Sbjct: 389 ------GNFTEAIASFDEALKLKHDYHEAWSGRGLVQLKLGQLSEAIASFDASLQLQPHD 442

Query: 279 ASLYVHRAMLMLQARGNVDEAIKLIEKAISIDKSCMFAYETLGTIEVQRGRLEEAVKCFN 338
             ++  R   + +A  N D AI    +A+        A+   G      G  EEA+  ++
Sbjct: 443 PEIWYFRGTALAEAGQNHD-AIACYAQALEYHPEFDLAWYKRGVALFNIGDWEEAIANYH 501

Query: 339 KALPLARDEAELSHIYSLRDAAIAQMKVCERYNIKKKVSP--RSQNITKNEKLAIKQLRE 396
           +A+ +  +  +     +    A  Q K+    NI++ ++   RS  I  N   A      
Sbjct: 502 QAIQINPECYQ-----AWYGLAGVQEKLG---NIQEAIAAYDRSTQIQPNFHEAW----- 548

Query: 397 NNDIIIRPADKGGKTVVMDKADYTQKMTSILNSNDYEIIPGDPTKTIEESEKYGNLENES 456
                    D+G   ++    ++ + + S   +     I  +P   +    +   L+N  
Sbjct: 549 --------IDRG--VILASLGNWEEAIASWDKA-----IAINPNFYLTWFNRGVALDNLG 593

Query: 457 GQKHAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNF 516
            ++ A + + KA        +++ +   ++Y RG      GQYEEA+ + D ++ + P++
Sbjct: 594 RREEAIASYDKAI-------EIESDFYLAWYNRGVAQFYLGQYEEAIISYDGSLKIKPDY 646

Query: 517 HVARAQR 523
             A   R
Sbjct: 647 WEAWLGR 653


>gi|425440012|ref|ZP_18820323.1| exported hypothetical protein [Microcystis aeruginosa PCC 9717]
 gi|389719634|emb|CCH96553.1| exported hypothetical protein [Microcystis aeruginosa PCC 9717]
          Length = 434

 Score = 90.9 bits (224), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 98/394 (24%), Positives = 171/394 (43%), Gaps = 55/394 (13%)

Query: 129 SVDPKIKVNAHIKRAVVHLHAA----SDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLF 184
           S +  I++N +  +A  +   A      + KA AD ++  + +PN A +YY R  +Y   
Sbjct: 64  SFNEAIRLNPNYAQAYGNRGIAYSRLQQYDKALADYNQFIRFNPNSAVAYYNRATLYDKL 123

Query: 185 GQYEEALRNLDKTIALNPNFHVARAQRHFVVHKMIVPGDRERVEQSLKEFRNFVDTHSNV 244
           G  ++A+ +  + I LNPNF  A + R    +K+  P      +QS+          SN 
Sbjct: 124 GDSQKAIADYAQAIRLNPNFTQAISGREIAQNKLRTP------QQSISTTNALAQYFSNG 177

Query: 245 VEACTLFAQVL--VDQEDFDGAEEYFNRSIRVDPENASLYVHRAMLMLQARGNVDEAIKL 302
             A   F Q +   D+ DFDGA   F+++I++ P+ A  Y+ RAM   +  G+++  I  
Sbjct: 178 RNAKDFFVQAMDKYDKADFDGAIVDFSQAIQLKPDYAQAYMGRAM-AYKGLGDLENQITE 236

Query: 303 IEKAISI--DKSCMFAYE-TLGTIEVQRGRLEEAVKCFNKALPLARDEAELSHIYSLRDA 359
           + KA  +   +    AY+ T+  I+V +  ++      N  L      AEL   Y + + 
Sbjct: 237 LRKAAELLQKQGDTEAYQTTIDLIKVTQDLIDSIRSNPNSKLAF----AELFFNYGIEEW 292

Query: 360 AIAQ-MKVCERYNIKKKVSPRSQNITKNEKLAIKQLRENNDIIIRPADKGGKTVVMDKAD 418
                ++   ++N+  +++P           A  +L E    I               AD
Sbjct: 293 KKGNFVQSLAQFNLAIRLNPNDAIAYILRGDAYFELGEYQKAI---------------AD 337

Query: 419 YTQKMTSILNSNDYEIIPGDPTKTIEESEKYGNLENESGQKHAASDFTKAFADLDEAEKV 478
           YTQ +          + P D    +     YG L+          ++ K  AD  +A ++
Sbjct: 338 YTQAI---------RLNPNDARAYLFRGNAYGQLK----------EYQKVIADYTQAIRL 378

Query: 479 DPNVADSYYQRGQIYCLFGQYEEALRNLDKTIAL 512
           DPN AD+Y  RG +Y + G  ++A+ +L+K   L
Sbjct: 379 DPNYADAYNLRGLVYEMSGNRQKAITDLEKAANL 412



 Score = 50.8 bits (120), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 35/111 (31%), Positives = 55/111 (49%), Gaps = 13/111 (11%)

Query: 94  NHTKALARLLRATVYIFTSQSTKAIEDLTQLVEDTSVDPKIKVNAHIKRAVVHLHAA--- 150
           N   A+A +LR   Y    +  KAI D TQ          I++N +  RA +    A   
Sbjct: 311 NPNDAIAYILRGDAYFELGEYQKAIADYTQ---------AIRLNPNDARAYLFRGNAYGQ 361

Query: 151 -SDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIAL 200
             ++ K  AD  +A ++DPN AD+Y  RG +Y + G  ++A+ +L+K   L
Sbjct: 362 LKEYQKVIADYTQAIRLDPNYADAYNLRGLVYEMSGNRQKAITDLEKAANL 412



 Score = 42.0 bits (97), Expect = 0.93,   Method: Compositional matrix adjust.
 Identities = 21/60 (35%), Positives = 34/60 (56%)

Query: 465 FTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQRH 524
           + KA AD ++  + +PN A +YY R  +Y   G  ++A+ +  + I LNPNF  A + R 
Sbjct: 92  YDKALADYNQFIRFNPNSAVAYYNRATLYDKLGDSQKAIADYAQAIRLNPNFTQAISGRE 151


>gi|359460872|ref|ZP_09249435.1| TPR repeat-containing serine/threonine protein kinase
           [Acaryochloris sp. CCMEE 5410]
          Length = 810

 Score = 90.5 bits (223), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 98/404 (24%), Positives = 174/404 (43%), Gaps = 33/404 (8%)

Query: 127 DTSVDPKIKVNAHIKRAVVHLHAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQ 186
           DT ++ + K  A  +       A  ++  A +D +EA  +DP  A++Y  RG      G+
Sbjct: 399 DTLLEQQPKTAAAFRERGAIRFAIGEYQAAISDYNEALTLDPKDAETYNHRGDAQVELGK 458

Query: 187 YEEALRNLDKTIALNPNFHVARAQRHFVVHKM-IVPGDRERVEQSLKEFRNFVDTHSNVV 245
           YE+A+ +  K I L PN    +AQ +  +  +  V G   ++E ++KE    +   SN +
Sbjct: 459 YEKAIADYRKAIRLQPN----QAQGYLNLGSVFFVQG---KLEAAVKELDKAIQAESNHL 511

Query: 246 EACTLFAQVLVDQEDFDGAEEYFNRSIRVDPENASLYVHRAMLMLQARGNVD---EAIKL 302
            A            D DGAE+ + R++ +    A  Y  R      A+  +D   +AI  
Sbjct: 512 SAHVNRGSYRSALGDSDGAEQDWERALELPVRTAKEYTSRGY----AKSRLDRKQDAIAD 567

Query: 303 IEKAISIDKSCMFAYETLGTIEVQRGRLEEAVKCFNKALPLARDEAELSHIYSLRDAAIA 362
             +A++I+     A+  LG +  ++G +E+A K F++AL   +     +  Y LR    A
Sbjct: 568 YNQALTINPQLTRAHTNLGGVFYEQGEIEQARKSFDQAL---QSNPNSTSAYLLRGELRA 624

Query: 363 QM-------KVCERYNIKKKVSPRSQNITKNEKLAIKQLRENNDIIIRPADKGGKTVVMD 415
                       + Y+    ++P+   +  N   A+  L E    +    +KG +     
Sbjct: 625 YQGQQADFEGALQDYDRAIAINPKDPFVLNNRCGALFSLNELQRALA-DCNKGLEINPSS 683

Query: 416 KADYTQKMTSILNSNDYEIIPGDPTKTIE-------ESEKYGNLENESGQKHAASDFTKA 468
            A YT +    L    YE    D  +TI+       E        N +  +    D   A
Sbjct: 684 AALYTVRGNIYLRLKQYEKAIQDYGRTIQINDTRKSEVRSQAAYSNRASARIQLKDLDGA 743

Query: 469 FADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIAL 512
             DL++A ++ P+ A+ YY+RG +Y +  + ++A+ +L K   L
Sbjct: 744 LKDLNDALRIKPDAAEDYYKRGLLYSVQNKRQDAITDLKKAADL 787



 Score = 59.7 bits (143), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 73/365 (20%), Positives = 146/365 (40%), Gaps = 45/365 (12%)

Query: 153 FTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQRH 212
           +  A    D   +  P  A ++ +RG I    G+Y+ A+ + ++ + L+P          
Sbjct: 391 YPDAITQFDTLLEQQPKTAAAFRERGAIRFAIGEYQAAISDYNEALTLDPK------DAE 444

Query: 213 FVVHKMIVPGDRERVEQSLKEFRNFVDTHSNVVEACTLFAQVLVDQEDFDGAEEYFNRSI 272
              H+     +  + E+++ ++R  +    N  +       V   Q   + A +  +++I
Sbjct: 445 TYNHRGDAQVELGKYEKAIADYRKAIRLQPNQAQGYLNLGSVFFVQGKLEAAVKELDKAI 504

Query: 273 RVDPENASLYVHRAMLMLQARGNVDEAIKLIEKAISIDKSCMFAYETLGTIEVQRGRLEE 332
           + +  + S +V+R      A G+ D A +  E+A+ +       Y + G  + +  R ++
Sbjct: 505 QAESNHLSAHVNRGSYR-SALGDSDGAEQDWERALELPVRTAKEYTSRGYAKSRLDRKQD 563

Query: 333 AVKCFNKALP----LARDEAELSHIYSLRDAAIAQMKVCERYNIKKKVSPRSQNITKNEK 388
           A+  +N+AL     L R    L  ++      I Q +      ++   +  S  + + E 
Sbjct: 564 AIADYNQALTINPQLTRAHTNLGGVF-YEQGEIEQARKSFDQALQSNPNSTSAYLLRGEL 622

Query: 389 LAIKQLRENNDIIIRPADKGGKTVVMDKADYTQKMTSILNSNDYEIIPGDPTKTIEESEK 448
            A +          + AD  G     D+A                I P DP         
Sbjct: 623 RAYQG---------QQADFEGALQDYDRA--------------IAINPKDPFV------- 652

Query: 449 YGNLENESGQKHAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDK 508
              L N  G   + ++  +A AD ++  +++P+ A  Y  RG IY    QYE+A+++  +
Sbjct: 653 ---LNNRCGALFSLNELQRALADCNKGLEINPSSAALYTVRGNIYLRLKQYEKAIQDYGR 709

Query: 509 TIALN 513
           TI +N
Sbjct: 710 TIQIN 714



 Score = 47.0 bits (110), Expect = 0.024,   Method: Compositional matrix adjust.
 Identities = 33/123 (26%), Positives = 60/123 (48%), Gaps = 6/123 (4%)

Query: 80  AIRHCTEEIESTSSNHTKALARLLRATVYIFTSQSTKAIEDLTQLVE--DTSVDPKIKVN 137
           A+  C + +E    N + A    +R  +Y+   Q  KAI+D  + ++  DT         
Sbjct: 669 ALADCNKGLEI---NPSSAALYTVRGNIYLRLKQYEKAIQDYGRTIQINDTRKSEVRSQA 725

Query: 138 AHIKRAVVHLHAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKT 197
           A+  RA   +    D   A  DL++A ++ P+ A+ YY+RG +Y +  + ++A+ +L K 
Sbjct: 726 AYSNRASARIQ-LKDLDGALKDLNDALRIKPDAAEDYYKRGLLYSVQNKRQDAITDLKKA 784

Query: 198 IAL 200
             L
Sbjct: 785 ADL 787



 Score = 41.6 bits (96), Expect = 1.1,   Method: Compositional matrix adjust.
 Identities = 20/57 (35%), Positives = 32/57 (56%)

Query: 459 KHAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPN 515
           + A  ++  A +D +EA  +DP  A++Y  RG      G+YE+A+ +  K I L PN
Sbjct: 419 RFAIGEYQAAISDYNEALTLDPKDAETYNHRGDAQVELGKYEKAIADYRKAIRLQPN 475


>gi|113476015|ref|YP_722076.1| hypothetical protein Tery_2383 [Trichodesmium erythraeum IMS101]
 gi|110167063|gb|ABG51603.1| TPR repeat [Trichodesmium erythraeum IMS101]
          Length = 1421

 Score = 90.5 bits (223), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 102/452 (22%), Positives = 184/452 (40%), Gaps = 52/452 (11%)

Query: 105  ATVYIFTSQSTKAIEDLTQLVEDTSVDPKIKVNAHIKRAVVHLHAASDFTKAFADLDEAE 164
               Y+   +  +AIE  +Q ++  S D +I  N  + R       A D   A AD ++A 
Sbjct: 935  GAAYVELGEFNEAIELFSQALKVDSQDSQIYQNLGVVR-----FKAGDKQGAIADYNQAI 989

Query: 165  KVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQRHFVVHKM------ 218
            K++PN  ++YY RG  Y   G  ++A+ +  K + L+P    A  QR  V  ++      
Sbjct: 990  KLNPNKPEAYYNRGIAYRFLGHNQDAMNDFTKVLQLHPRVVDAYTQRGIVRFEVKDIEGA 1049

Query: 219  ---------IVPGDRERV-------------EQSLKEFRNFVDTHSNVVEACTLFAQVLV 256
                     + P   E +             + SL +    +  H   ++A    + V  
Sbjct: 1050 IADFNDAIKLNPKHPEAIYNRAIIRRLTKDNQGSLDDLNKVIQLHPKYIDAYIKRSIVRF 1109

Query: 257  DQEDFDGAEEYFNRSIRVDPENASLYVHRAMLMLQARGNVDEAIKLIEKAISIDKSCMFA 316
            D  D +GA +  + ++++ P NA  Y  RA    ++ G++  AI   E AI ++     A
Sbjct: 1110 DLGDHEGALKDLDSAVQLQPNNAEAYYQRANTK-RSMGDILSAIADFENAIRLNPKYHQA 1168

Query: 317  YETLGTIEVQRGRLEEAVKCFNKALPLARDEAELSH---IYSLRDAAIAQMKVCERYNIK 373
            Y  +G + ++RG +  A++ F  A+ +  + AE  +       R   I      + +   
Sbjct: 1169 YNDMGIVRLRRGDISGAMENFEAAIQINPNYAEGHNNRGFTKFRRGDIP--GAMKDFEAA 1226

Query: 374  KKVSP---RSQNITKNEKLAIKQLRENNDIIIRPADKGGKTVVMDK--ADYTQKMTSILN 428
             +++P    + N   N +       +  D      D G    +  K    Y  +  ++L 
Sbjct: 1227 IQINPNYAEAYNNLGNSRF------QTGDFQGAMRDFGETLRIHPKYVPAYNNRALALLK 1280

Query: 429  SNDYEIIPGDPTKTIEESEKYGNLENESGQKHA-ASDFTKAFADLDEAEKVDPNVADSYY 487
              D+     D  + ++ + KYG      G  H    D  +A  D +E  ++ P   D+Y 
Sbjct: 1281 LGDFSGATTDCYQALKINPKYGLAYYNLGLIHTEMGDLEQAILDYNEVLRIYPRKIDAYV 1340

Query: 488  QRGQIYCLFGQYEEALRNLDKTIALNPNF-HV 518
             RG IY     Y +A+++    + +NPN  HV
Sbjct: 1341 NRGLIYLKLKNYTQAIKDQTSALNINPNLPHV 1372



 Score = 70.1 bits (170), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 79/309 (25%), Positives = 138/309 (44%), Gaps = 38/309 (12%)

Query: 238  VDTHSNVVEAC------TLFAQVLV--DQEDFDGAEEYFNRSIRVDPENASLYVHRAMLM 289
            +   S  VE C       L  Q L+   + D  GA E +N++I ++  N  LY +RA+ +
Sbjct: 845  IAAMSEKVEKCRQEAVNVLHNQGLIKLQKRDHTGAIEDYNQAIFLEKNNYLLYHNRAIAI 904

Query: 290  LQARGNVDEAIKLIEKAISIDKSCMFAYETLGTIEVQRGRLEEAVKCFNKALPLARDEAE 349
             Q  GN+  AI+  +KA+ ++   +  Y  LG   V+ G   EA++ F++AL +   +++
Sbjct: 905  AQM-GNLKGAIENFKKALELEPKDLQTYNNLGAAYVELGEFNEAIELFSQALKV---DSQ 960

Query: 350  LSHIYSLRDAAIAQMKVCER------YNIKKKVSPRSQNITKNEKLAIKQLRENNDII-- 401
             S IY  ++  + + K  ++      YN   K++P       N  +A + L  N D +  
Sbjct: 961  DSQIY--QNLGVVRFKAGDKQGAIADYNQAIKLNPNKPEAYYNRGIAYRFLGHNQDAMND 1018

Query: 402  ------IRPADKGGKTVVMDKADYTQKMTSILNSNDYEIIPGDPTKTIEESEKYGN-LEN 454
                  + P        V+D   YTQ+        D E    D    I+ + K+   + N
Sbjct: 1019 FTKVLQLHPR-------VVDA--YTQRGIVRFEVKDIEGAIADFNDAIKLNPKHPEAIYN 1069

Query: 455  ESGQKHAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNP 514
             +  +    D   +  DL++  ++ P   D+Y +R  +    G +E AL++LD  + L P
Sbjct: 1070 RAIIRRLTKDNQGSLDDLNKVIQLHPKYIDAYIKRSIVRFDLGDHEGALKDLDSAVQLQP 1129

Query: 515  NFHVARAQR 523
            N   A  QR
Sbjct: 1130 NNAEAYYQR 1138


>gi|166363119|ref|YP_001655392.1| hypothetical protein MAE_03780 [Microcystis aeruginosa NIES-843]
 gi|166085492|dbj|BAG00200.1| tetratricopeptide repeat protein [Microcystis aeruginosa NIES-843]
          Length = 1379

 Score = 90.5 bits (223), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 107/438 (24%), Positives = 194/438 (44%), Gaps = 60/438 (13%)

Query: 112  SQSTKAIE--DLTQLVEDTSVDPKIKVNAHIKRAVVHLHAASDFTKAFADLDEAEKVDPN 169
            S  TKAI+   L+   +   ++P   V A+  R +++ +    +  A +D  +A  ++PN
Sbjct: 845  SDYTKAIDILALSDYTKAIDINPNYAV-AYNNRGLLYFNQ-KKYDLALSDYSKAIDINPN 902

Query: 170  VADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQRHFVVHKMIVPGDRERVEQ 229
             A++Y  RG +Y    +Y+ AL +  K I +NPN+ VA   R  +         +++ E 
Sbjct: 903  YAETYNNRGNLYKDLQKYDLALSDYSKAIDINPNYAVAYNNRGLLYLL------QQKYEL 956

Query: 230  SLKEFRNFVDTHSNVVEACTLFAQVLVDQEDFDGAEEYFNRSIRVDPENASLYVHRAMLM 289
            +L ++   ++ + N+  A      +   Q+ ++ A   +++++ ++P  A  Y+ R  + 
Sbjct: 957  ALADWNKAIELNRNLALAYLGRGGIYSLQQKYELALADYSKALEINPNLAEAYLGRGSIY 1016

Query: 290  -LQARGNVDEAIKLIEKAISIDKSCMFAYETLGTIEVQRGRLEEAVKCFNKALPLARDEA 348
             LQ +   + A+    KA+ I+ +   AY   G I + + + E A+  FNKAL       
Sbjct: 1017 SLQQK--YELALADYSKALEINPNLAEAYLGRGGIYLLQQKYELALADFNKAL------- 1067

Query: 349  ELSHIYSLRDAAIAQMKVCERYNIKKKVSPRSQNITKNEKLAIKQLRENNDIIIRPADKG 408
            E++  Y     A+A     E Y  +KK            +LA+    +  DI        
Sbjct: 1068 EINPNY-----AMAYFGRGELYYYQKKY-----------ELALADYNKAIDI-------- 1103

Query: 409  GKTVVMDKADYTQKMTSILNSNDYEIIPGDPTKTIEESEKY-------GNLENESGQKHA 461
                      Y  + +   N   YE+   D  K IE   K        GN+ N+  QK  
Sbjct: 1104 ---NPNYANAYNNRGSIYYNQQKYELALADWNKAIELDSKLAMAYSNRGNIYNDQ-QK-- 1157

Query: 462  ASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARA 521
               +  A AD ++A ++D  +A +Y  RG +Y L  +YE AL + +K + +NPN   A  
Sbjct: 1158 ---YELALADFNKAIELDSKLAMAYSNRGNLYYLQQKYELALADYNKALDINPNLAEAYL 1214

Query: 522  QRHFVWTSTLAELMAFSD 539
             R  ++     + +A +D
Sbjct: 1215 GRGGIYYYQQKDELALAD 1232



 Score = 84.0 bits (206), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 71/295 (24%), Positives = 140/295 (47%), Gaps = 15/295 (5%)

Query: 55   DTNESHELDLLSKAKRAFEHEDYLTAIRHCTEEIESTSSNHTKALARLLRATVYIFTSQS 114
            D N ++ +   ++       + Y  A+    + IE    N   ALA L R  +Y    + 
Sbjct: 932  DINPNYAVAYNNRGLLYLLQQKYELALADWNKAIEL---NRNLALAYLGRGGIYSLQQKY 988

Query: 115  TKAIEDLTQLVEDTSVDPKIKVNAHIKRAVVHLHAASDFTKAFADLDEAEKVDPNVADSY 174
              A+ D ++ +E   ++P +   A++ R  ++      +  A AD  +A +++PN+A++Y
Sbjct: 989  ELALADYSKALE---INPNL-AEAYLGRGSIY-SLQQKYELALADYSKALEINPNLAEAY 1043

Query: 175  YQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQRHFVVHKMIVPGDRERVEQSLKEF 234
              RG IY L  +YE AL + +K + +NPN+ +A   R  + +       +++ E +L ++
Sbjct: 1044 LGRGGIYLLQQKYELALADFNKALEINPNYAMAYFGRGELYYY------QKKYELALADY 1097

Query: 235  RNFVDTHSNVVEACTLFAQVLVDQEDFDGAEEYFNRSIRVDPENASLYVHRAMLMLQARG 294
               +D + N   A      +  +Q+ ++ A   +N++I +D + A  Y +R  +    + 
Sbjct: 1098 NKAIDINPNYANAYNNRGSIYYNQQKYELALADWNKAIELDSKLAMAYSNRGNIY-NDQQ 1156

Query: 295  NVDEAIKLIEKAISIDKSCMFAYETLGTIEVQRGRLEEAVKCFNKALPLARDEAE 349
              + A+    KAI +D     AY   G +   + + E A+  +NKAL +  + AE
Sbjct: 1157 KYELALADFNKAIELDSKLAMAYSNRGNLYYLQQKYELALADYNKALDINPNLAE 1211



 Score = 79.3 bits (194), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 101/443 (22%), Positives = 197/443 (44%), Gaps = 51/443 (11%)

Query: 108  YIFTSQSTKAIEDLTQLVEDTSVDPKIKVNAHIKRAVVHLHAASDFTKAFADLDEAEKVD 167
            Y+  SQ  +  E L  + +   + P+     +      +L     +  A +D ++A K++
Sbjct: 662  YVVLSQLKRYDEGLAAITQAIDLAPRAAWYGNRGNLYYNLQ---KYDLALSDWNKAIKIN 718

Query: 168  PNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQRHFVVHKMIVPGDRERV 227
            PN A++Y  RG +Y    +YE AL +  K I +NPN  VA   R  + + +      ++ 
Sbjct: 719  PNYANAYNNRGNLYSDQKKYELALADYSKAIDINPNDAVAYYNRGNLYYNL------QKY 772

Query: 228  EQSLKEFRNFVDTHSNVVEACTLFAQVLVDQEDFDGAEEYFNRSIRVDPENASLYVHRAM 287
            + +L ++   +D + N  +A      +  D + +D A   ++++I ++P  A  Y +R  
Sbjct: 773  DLALSDYSKAIDINPNDAKAYYNRGNLYSDLQKYDLALSDYSKAIDINPNYAETYNNRGN 832

Query: 288  LM--LQ----ARGNVDEAIKLI-----EKAISIDKSCMFAYETLGTIEVQRGRLEEAVKC 336
            L   LQ    A  +  +AI ++      KAI I+ +   AY   G +   + + + A+  
Sbjct: 833  LYKDLQKYDLALSDYTKAIDILALSDYTKAIDINPNYAVAYNNRGLLYFNQKKYDLALSD 892

Query: 337  FNKALPLARDEAEL----SHIYS-LRDAAIAQMKVCERYNIKKKVSPRSQN------ITK 385
            ++KA+ +  + AE      ++Y  L+   +A     +  +I    +    N      + +
Sbjct: 893  YSKAIDINPNYAETYNNRGNLYKDLQKYDLALSDYSKAIDINPNYAVAYNNRGLLYLLQQ 952

Query: 386  NEKLAI----KQLRENNDIIIRPADKGGKTVVMDKADYTQKMTSILNSNDYEIIPGDPTK 441
              +LA+    K +  N ++ +    +GG   +  K               YE+   D +K
Sbjct: 953  KYELALADWNKAIELNRNLALAYLGRGGIYSLQQK---------------YELALADYSK 997

Query: 442  TIEESEKYGNLENESGQKHAASD-FTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYE 500
             +E +          G  ++    +  A AD  +A +++PN+A++Y  RG IY L  +YE
Sbjct: 998  ALEINPNLAEAYLGRGSIYSLQQKYELALADYSKALEINPNLAEAYLGRGGIYLLQQKYE 1057

Query: 501  EALRNLDKTIALNPNFHVARAQR 523
             AL + +K + +NPN+ +A   R
Sbjct: 1058 LALADFNKALEINPNYAMAYFGR 1080



 Score = 75.5 bits (184), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 55/196 (28%), Positives = 101/196 (51%), Gaps = 9/196 (4%)

Query: 156  AFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQRHFVV 215
            A AD ++A ++D  +A +Y  RG IY    +YE AL + +K I L+    +A + R  + 
Sbjct: 1127 ALADWNKAIELDSKLAMAYSNRGNIYNDQQKYELALADFNKAIELDSKLAMAYSNRGNLY 1186

Query: 216  HKMIVPGDRERVEQSLKEFRNFVDTHSNVVEACTLFAQVLVDQEDFDGAEEYFNRSIRVD 275
            +       +++ E +L ++   +D + N+ EA      +   Q+  + A   FN++I ++
Sbjct: 1187 YL------QQKYELALADYNKALDINPNLAEAYLGRGGIYYYQQKDELALADFNKAIEIN 1240

Query: 276  PENASLYVHRAMLM-LQARGNVDEAIKLIEKAISIDKSCMFAYETLGTIEVQRGRLEEAV 334
            P     Y +R  L  LQ +   + A+    KAI I+K+  FA   +G ++ ++G + EA+
Sbjct: 1241 PNLVEAYNNRGNLYYLQQK--YELALSDYNKAIKINKNAWFAMMGIGLVKYEQGSISEAI 1298

Query: 335  KCFNKALPLARDEAEL 350
            K + KAL +    AE+
Sbjct: 1299 KQWEKALIINNQSAEI 1314



 Score = 71.2 bits (173), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 59/240 (24%), Positives = 119/240 (49%), Gaps = 12/240 (5%)

Query: 104  RATVYIFTSQSTKAIEDLTQLVEDTSVDPKIKVNAHIKRAVVHLHAASDFTKAFADLDEA 163
            R ++Y    +   A+ D  + +E   +D K+ + A+  R  ++ +    +  A AD ++A
Sbjct: 1114 RGSIYYNQQKYELALADWNKAIE---LDSKLAM-AYSNRGNIY-NDQQKYELALADFNKA 1168

Query: 164  EKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQRHFVVHKMIVPGD 223
             ++D  +A +Y  RG +Y L  +YE AL + +K + +NPN   A   R  + +       
Sbjct: 1169 IELDSKLAMAYSNRGNLYYLQQKYELALADYNKALDINPNLAEAYLGRGGIYYY------ 1222

Query: 224  RERVEQSLKEFRNFVDTHSNVVEACTLFAQVLVDQEDFDGAEEYFNRSIRVDPENASLYV 283
            +++ E +L +F   ++ + N+VEA      +   Q+ ++ A   +N++I+++ +NA   +
Sbjct: 1223 QQKDELALADFNKAIEINPNLVEAYNNRGNLYYLQQKYELALSDYNKAIKIN-KNAWFAM 1281

Query: 284  HRAMLMLQARGNVDEAIKLIEKAISIDKSCMFAYETLGTIEVQRGRLEEAVKCFNKALPL 343
                L+   +G++ EAIK  EKA+ I+         L      +G  ++A+K    AL +
Sbjct: 1282 MGIGLVKYEQGSISEAIKQWEKALIINNQSAEIQLALAVAFYHQGEKDKALKLAESALSI 1341



 Score = 59.3 bits (142), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 98/404 (24%), Positives = 168/404 (41%), Gaps = 44/404 (10%)

Query: 153 FTKAFADLDEAEKV-DP-NVADSYYQRGQIYCLFGQYEEALRNLDKTIALNP------NF 204
           + +A    DEA K  DP NV  ++Y +G      G+Y+ A+  L + I   P      NF
Sbjct: 560 YEEAIKAFDEAIKQNDPKNVYLAWYGKGLALGYLGKYQTAIEALQQAINTLPKREDLKNF 619

Query: 205 HVARAQRHFVVHKMIVPGDRERVEQSLKEFRNFVDTHSNVVEACTLFAQVLVDQEDFDGA 264
           H +  Q+  VV++ +     E  EQ+L      +    N          VL   + +D  
Sbjct: 620 HSSILQKQSVVYRYL-----ENYEQALTVINQAISLFPNNPNHYNEKYVVLSQLKRYDEG 674

Query: 265 EEYFNRSIRVDPENASLYVHRAMLMLQARGNVDEAIKLIEKAISIDKSCMFAYETLGTIE 324
                ++I + P  A+ Y +R  L    +   D A+    KAI I+ +   AY   G + 
Sbjct: 675 LAAITQAIDLAPR-AAWYGNRGNLYYNLQ-KYDLALSDWNKAIKINPNYANAYNNRGNLY 732

Query: 325 VQRGRLEEAVKCFNKALPLARDEAELSH-----IYSLRDAAIAQMKVCERYNIK----KK 375
             + + E A+  ++KA+ +  ++A   +      Y+L+   +A     +  +I     K 
Sbjct: 733 SDQKKYELALADYSKAIDINPNDAVAYYNRGNLYYNLQKYDLALSDYSKAIDINPNDAKA 792

Query: 376 VSPRSQNITKNEKLAIKQLRENNDIIIRPA------DKGGKTVVMDK-----ADYTQKMT 424
              R    +  +K  +     +  I I P       ++G     + K     +DYT K  
Sbjct: 793 YYNRGNLYSDLQKYDLALSDYSKAIDINPNYAETYNNRGNLYKDLQKYDLALSDYT-KAI 851

Query: 425 SILNSNDYEIIPGDPTKTIEESEKYGNLENESGQKH-AASDFTKAFADLDEAEKVDPNVA 483
            IL  +DY       TK I+ +  Y    N  G  +     +  A +D  +A  ++PN A
Sbjct: 852 DILALSDY-------TKAIDINPNYAVAYNNRGLLYFNQKKYDLALSDYSKAIDINPNYA 904

Query: 484 DSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQRHFVW 527
           ++Y  RG +Y    +Y+ AL +  K I +NPN+ VA   R  ++
Sbjct: 905 ETYNNRGNLYKDLQKYDLALSDYSKAIDINPNYAVAYNNRGLLY 948



 Score = 57.0 bits (136), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 90/404 (22%), Positives = 173/404 (42%), Gaps = 47/404 (11%)

Query: 168 PNV---ADSYYQRGQIYCLFGQYEEALRNLDKTIALN--PNFHVARAQRHFVVHKMIVPG 222
           PN    AD + QRG       +YEEA++  D+ I  N   N ++A   +   +  +   G
Sbjct: 538 PNTNAKADIWIQRGGQLWRLERYEEAIKAFDEAIKQNDPKNVYLAWYGKGLALGYL---G 594

Query: 223 DRERVEQSLKE----------FRNFVDTHSNVVEACTLFAQVLVDQEDFDGAEEYFNRSI 272
             +   ++L++           +NF   HS++++  ++  + L   E+++ A    N++I
Sbjct: 595 KYQTAIEALQQAINTLPKREDLKNF---HSSILQKQSVVYRYL---ENYEQALTVINQAI 648

Query: 273 RVDPENASLYVHRAMLMLQARGNVDEAIKLIEKAISIDKSCMFAYETLGTIEVQRGRLEE 332
            + P N + Y  + +++ Q +   DE +  I +AI +     + Y   G +     + + 
Sbjct: 649 SLFPNNPNHYNEKYVVLSQLK-RYDEGLAAITQAIDLAPRAAW-YGNRGNLYYNLQKYDL 706

Query: 333 AVKCFNKALPLARDEAEL----SHIYSLRDAAIAQMKVCERYNIKKKVSPRSQNITKNEK 388
           A+  +NKA+ +  + A       ++YS  D    ++ + + Y+    ++P       N  
Sbjct: 707 ALSDWNKAIKINPNYANAYNNRGNLYS--DQKKYELALAD-YSKAIDINPNDAVAYYNRG 763

Query: 389 LAIKQLRENNDIIIRPADKGGKTVVMDKADYTQKMTSILNSNDYEIIPGDPTKTIEESEK 448
                L++  D+ +    K       D   Y  +     +   Y++   D +K I+ +  
Sbjct: 764 NLYYNLQK-YDLALSDYSKAIDINPNDAKAYYNRGNLYSDLQKYDLALSDYSKAIDINPN 822

Query: 449 YGNLENESG------QKH--AASDFTK-----AFADLDEAEKVDPNVADSYYQRGQIYCL 495
           Y    N  G      QK+  A SD+TK     A +D  +A  ++PN A +Y  RG +Y  
Sbjct: 823 YAETYNNRGNLYKDLQKYDLALSDYTKAIDILALSDYTKAIDINPNYAVAYNNRGLLYFN 882

Query: 496 FGQYEEALRNLDKTIALNPNFHVARAQRHFVWTSTLAELMAFSD 539
             +Y+ AL +  K I +NPN+      R  ++       +A SD
Sbjct: 883 QKKYDLALSDYSKAIDINPNYAETYNNRGNLYKDLQKYDLALSD 926



 Score = 50.8 bits (120), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 45/166 (27%), Positives = 80/166 (48%), Gaps = 18/166 (10%)

Query: 50   ELTNGDTNESHELDLLSKAKRAF--------EHEDYLTAIRHCTEEIESTSSNHTKALAR 101
            EL   D N++ ELD  SK   A+        + + Y  A+    + IE  S     A+A 
Sbjct: 1125 ELALADWNKAIELD--SKLAMAYSNRGNIYNDQQKYELALADFNKAIELDSK---LAMAY 1179

Query: 102  LLRATVYIFTSQSTKAIEDLTQLVEDTSVDPKIKVNAHIKRAVVHLHAASDFTKAFADLD 161
              R  +Y    +   A+ D  + ++   ++P +   A++ R  ++ +   D   A AD +
Sbjct: 1180 SNRGNLYYLQQKYELALADYNKALD---INPNL-AEAYLGRGGIYYYQQKD-ELALADFN 1234

Query: 162  EAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVA 207
            +A +++PN+ ++Y  RG +Y L  +YE AL + +K I +N N   A
Sbjct: 1235 KAIEINPNLVEAYNNRGNLYYLQQKYELALSDYNKAIKINKNAWFA 1280


>gi|220927089|ref|YP_002502391.1| peptidase C14 caspase catalytic subunit p20 [Methylobacterium
           nodulans ORS 2060]
 gi|219951696|gb|ACL62088.1| peptidase C14 caspase catalytic subunit p20 [Methylobacterium
           nodulans ORS 2060]
          Length = 988

 Score = 90.5 bits (223), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 102/472 (21%), Positives = 202/472 (42%), Gaps = 69/472 (14%)

Query: 104 RATVYIFTSQSTKAIEDLTQLVEDTSVDPKIKVNAHIKRAVVHLHAASDFTKAFADLDEA 163
           R   Y    +  +AI D  Q++    ++PK  V A+  R   +  +  ++ +A AD D+A
Sbjct: 66  RGFAYQSKGEYDRAIADYDQVLR---LNPK-NVIAYNNRGFAY-QSKGEYDRAIADYDQA 120

Query: 164 EKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQRHFVVHKMIVPGD 223
            +++P  A +Y  RG ++   G+++ A+ +  + +  NP +  A   R  V         
Sbjct: 121 LQLNPKYAIAYRNRGDVFRSKGEHDRAIADYSQALRFNPKYIFAYNNRGLVFQS------ 174

Query: 224 RERVEQSLKEFRNFVDTHSNVVEACTLFAQVLVDQEDFDGAEEYFNRSIRVDPENASLYV 283
           +   ++++ +F   +      V A          + ++D A   F++++R+D +    Y 
Sbjct: 175 KGEYDRAIADFDQALRLDPKYVVAYNNRGLAFQSKREYDRAIADFDQALRLDSKYKFAYN 234

Query: 284 HRAMLMLQARGNVDEAIKLIEKAISIDKSCMFAYETLGTIEVQRGRLEEAVKCFNKALPL 343
           +R  L  Q++G  D AI   ++A+ +D    FAY   G     +G  + A+  +++AL L
Sbjct: 235 NRG-LTFQSKGEHDRAIADFDQALRLDPKYTFAYRNRGDAFRSKGEYDRAIADYDQALLL 293

Query: 344 ---------AR----------DEAELSHIYSLR----------------------DAAIA 362
                    AR          D A   +  +LR                      D AIA
Sbjct: 294 DPKYTFAYTARAFAFQSKRDYDRALADYDQALRLDPKSVAAYRNRGDFFRSKGDYDRAIA 353

Query: 363 QMKVCERYNIKKKVSPRSQNI---TKNE-KLAIKQLRENNDIIIRPADKGGKTVVMDKAD 418
                 R + K K++  ++ +   +KNE  LAI     +  ++I P D     V+     
Sbjct: 354 DYDEALRLDPKNKLAYNNRGLVFQSKNEYNLAIADF--DQALLIDPKD----AVI----- 402

Query: 419 YTQKMTSILNSNDYEIIPGDPTKTIEESEKYGNLENESGQK-HAASDFTKAFADLDEAEK 477
           Y  +     +  +Y+    +  + ++   KY  + N  G   +   ++ +A AD D++ +
Sbjct: 403 YRNRGDVFRSKGEYDRAIANYDQALQLDPKYAAVHNNRGLAFYRKGEYDRALADYDQSLQ 462

Query: 478 VDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQRHFVWTS 529
           +DP  A  Y  RG ++ + G+++ A+ + D+ + L+P +  A   R  V+ +
Sbjct: 463 LDPKQAVVYTNRGDVFRIKGEHDRAIADYDQALRLDPKYIFAYNNRGLVFQN 514



 Score = 87.0 bits (214), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 98/451 (21%), Positives = 190/451 (42%), Gaps = 57/451 (12%)

Query: 104 RATVYIFTSQSTKAIEDLTQLVEDTSVDPKIKVNAHIKRAVVHLHAASDFTKAFADLDEA 163
           R   +    +  +AI D  Q +    +DPK    A+  RA     +  D+ +A AD D+A
Sbjct: 270 RGDAFRSKGEYDRAIADYDQAL---LLDPKYTF-AYTARAFA-FQSKRDYDRALADYDQA 324

Query: 164 EKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQRHFVVHK------ 217
            ++DP    +Y  RG  +   G Y+ A+ + D+ + L+P   +A   R  V         
Sbjct: 325 LRLDPKSVAAYRNRGDFFRSKGDYDRAIADYDEALRLDPKNKLAYNNRGLVFQSKNEYNL 384

Query: 218 ---------MIVPGD------RERVEQSLKEFRNFVDTHSNVVEACTLFAQV-------L 255
                    +I P D      R  V +S  E+   +  +   ++    +A V        
Sbjct: 385 AIADFDQALLIDPKDAVIYRNRGDVFRSKGEYDRAIANYDQALQLDPKYAAVHNNRGLAF 444

Query: 256 VDQEDFDGAEEYFNRSIRVDPENASLYVHRAMLMLQARGNVDEAIKLIEKAISIDKSCMF 315
             + ++D A   +++S+++DP+ A +Y +R   + + +G  D AI   ++A+ +D   +F
Sbjct: 445 YRKGEYDRALADYDQSLQLDPKQAVVYTNRGD-VFRIKGEHDRAIADYDQALRLDPKYIF 503

Query: 316 AYETLGTIEVQRGRLEEAVKCFNKALPLARDEAELSHIYSLR----------DAAIAQMK 365
           AY   G +   +G    A+  +++ L L   + + +  Y+ R          D AIA   
Sbjct: 504 AYNNRGLVFQNKGEYNRAILDYDQTLRL---DPKYAIAYANRGDTFQSKGEYDRAIADYD 560

Query: 366 VCERYNIKKKVSPRSQNITKNEKLAIKQLRENNDIIIRPADKGGKTVVMDKADYTQKMTS 425
              ++N K  ++   + +    K         +D  I   ++  +      A +  +  +
Sbjct: 561 QALQHNPKYVIAYNGRGLAFYRK-------GEHDRAIADYEEALRLDPKSAAAFNNRGAA 613

Query: 426 ILNSNDYEIIPGDPTKTIEESEKYGNLENESGQ--KHAASDFTKAFADLDEAEKVDPNVA 483
           +    +Y+    D  + +     + N     G   +H   D  +A ADL+EA +++P  A
Sbjct: 614 LNKKGEYDRAIADLDQALRLKPGFTNPHYHRGMAFRHK-GDLDRALADLNEAVRLNPKYA 672

Query: 484 DSYYQRGQIYCLFGQYEEALRNLDKTIALNP 514
           D+Y +RG  +   G+ + AL +L + + L P
Sbjct: 673 DAYQERGVTFQARGESDRALADLAEAVRLKP 703



 Score = 85.1 bits (209), Expect = 9e-14,   Method: Compositional matrix adjust.
 Identities = 94/453 (20%), Positives = 194/453 (42%), Gaps = 60/453 (13%)

Query: 116 KAIEDLTQLVEDTSVDPKIKVNAHIKRAVVHLHAASDFTKAFADLDEAEKVDPNVADSYY 175
           +AI D  Q +    +D K K  A+  R +    +  +  +A AD D+A ++DP    +Y 
Sbjct: 214 RAIADFDQALR---LDSKYKF-AYNNRGLT-FQSKGEHDRAIADFDQALRLDPKYTFAYR 268

Query: 176 QRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQRHFVVHKMIVPGDRERVEQSLKEFR 235
            RG  +   G+Y+ A+ + D+ + L+P +  A   R F          +   +++L ++ 
Sbjct: 269 NRGDAFRSKGEYDRAIADYDQALLLDPKYTFAYTARAFAFQS------KRDYDRALADYD 322

Query: 236 NFVDTHSNVVEACTLFAQVLVDQEDFDGAEEYFNRSIRVDPENASLYVHRAMLMLQARGN 295
             +      V A          + D+D A   ++ ++R+DP+N   Y +R  L+ Q++  
Sbjct: 323 QALRLDPKSVAAYRNRGDFFRSKGDYDRAIADYDEALRLDPKNKLAYNNRG-LVFQSKNE 381

Query: 296 VDEAIKLIEKAISIDKSCMFAYETLGTIEVQRGRLEEAVKCFNKALPLARDEAELSHIYS 355
            + AI   ++A+ ID      Y   G +   +G  + A+  +++AL L   + + + +++
Sbjct: 382 YNLAIADFDQALLIDPKDAVIYRNRGDVFRSKGEYDRAIANYDQALQL---DPKYAAVHN 438

Query: 356 LRDAAIAQMKVCER----YNIKKKVSPRSQNITKNEKLAIKQLRENNDIIIRPADKGGKT 411
            R  A  +    +R    Y+   ++ P+ Q +    +  + +++  +D  I   D+  + 
Sbjct: 439 NRGLAFYRKGEYDRALADYDQSLQLDPK-QAVVYTNRGDVFRIKGEHDRAIADYDQALRL 497

Query: 412 -------------VVMDKADYTQKMT---------------------SILNSNDYEIIPG 437
                        V  +K +Y + +                      +  +  +Y+    
Sbjct: 498 DPKYIFAYNNRGLVFQNKGEYNRAILDYDQTLRLDPKYAIAYANRGDTFQSKGEYDRAIA 557

Query: 438 DPTKTIEESEKYGNLENESGQK-HAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLF 496
           D  + ++ + KY    N  G   +   +  +A AD +EA ++DP  A ++  RG      
Sbjct: 558 DYDQALQHNPKYVIAYNGRGLAFYRKGEHDRAIADYEEALRLDPKSAAAFNNRGAALNKK 617

Query: 497 GQYEEALRNLDKTIAL-----NPNFHVARAQRH 524
           G+Y+ A+ +LD+ + L     NP++H   A RH
Sbjct: 618 GEYDRAIADLDQALRLKPGFTNPHYHRGMAFRH 650



 Score = 82.4 bits (202), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 93/417 (22%), Positives = 172/417 (41%), Gaps = 44/417 (10%)

Query: 147 LHAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHV 206
             +  ++ +A AD D+A +++P    +Y  RG  Y   G+Y+ A+ + D+ + LNP   +
Sbjct: 36  FQSKGEYDRAIADYDQALRLNPKYVTAYSNRGFAYQSKGEYDRAIADYDQVLRLNPKNVI 95

Query: 207 ARAQRHFVVHKMIVPGDRERV----EQSLK-------EFRNFVDTHSNVVE---ACTLFA 252
           A   R F        G+ +R     +Q+L+        +RN  D   +  E   A   ++
Sbjct: 96  AYNNRGFAYQSK---GEYDRAIADYDQALQLNPKYAIAYRNRGDVFRSKGEHDRAIADYS 152

Query: 253 Q-----------------VLVDQEDFDGAEEYFNRSIRVDPENASLYVHRAMLMLQARGN 295
           Q                 V   + ++D A   F++++R+DP+    Y +R  L  Q++  
Sbjct: 153 QALRFNPKYIFAYNNRGLVFQSKGEYDRAIADFDQALRLDPKYVVAYNNRG-LAFQSKRE 211

Query: 296 VDEAIKLIEKAISIDKSCMFAYETLGTIEVQRGRLEEAVKCFNKALPLARDEAELSHIYS 355
            D AI   ++A+ +D    FAY   G     +G  + A+  F++AL L   + + +  Y 
Sbjct: 212 YDRAIADFDQALRLDSKYKFAYNNRGLTFQSKGEHDRAIADFDQALRL---DPKYTFAYR 268

Query: 356 LRDAAIAQMKVCER----YNIKKKVSPRSQNITKNEKLAIKQLRENNDIIIRPADKGGKT 411
            R  A       +R    Y+    + P+          A  Q + + D  +   D+  + 
Sbjct: 269 NRGDAFRSKGEYDRAIADYDQALLLDPKYTFAYTARAFAF-QSKRDYDRALADYDQALRL 327

Query: 412 VVMDKADYTQKMTSILNSNDYEIIPGDPTKTIEESEKYGNLENESGQK-HAASDFTKAFA 470
                A Y  +     +  DY+    D  + +    K     N  G    + +++  A A
Sbjct: 328 DPKSVAAYRNRGDFFRSKGDYDRAIADYDEALRLDPKNKLAYNNRGLVFQSKNEYNLAIA 387

Query: 471 DLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQRHFVW 527
           D D+A  +DP  A  Y  RG ++   G+Y+ A+ N D+ + L+P +      R   +
Sbjct: 388 DFDQALLIDPKDAVIYRNRGDVFRSKGEYDRAIANYDQALQLDPKYAAVHNNRGLAF 444



 Score = 44.3 bits (103), Expect = 0.17,   Method: Compositional matrix adjust.
 Identities = 21/67 (31%), Positives = 37/67 (55%)

Query: 463 SDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQ 522
            ++ +A AD D+A +++P    +Y  RG  Y   G+Y+ A+ + D+ + LNP   +A   
Sbjct: 40  GEYDRAIADYDQALRLNPKYVTAYSNRGFAYQSKGEYDRAIADYDQVLRLNPKNVIAYNN 99

Query: 523 RHFVWTS 529
           R F + S
Sbjct: 100 RGFAYQS 106


>gi|195174738|ref|XP_002028129.1| GL21360 [Drosophila persimilis]
 gi|194115869|gb|EDW37912.1| GL21360 [Drosophila persimilis]
          Length = 453

 Score = 90.1 bits (222), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 65/247 (26%), Positives = 119/247 (48%), Gaps = 11/247 (4%)

Query: 9   HAKEEISKRSFFKPSKQFIKTYLKSFPNDPILQPDGLSNGVELTNGDTNESHELDLLSKA 68
           +AKE + +     PSK++I++YL +F  DP+L+    S+ V            +    +A
Sbjct: 169 NAKEHMLREGTSLPSKRYIRSYLATFIADPMLKMTLPSSAVA--------DAPVRGFVRA 220

Query: 69  KRAFEHEDYLTAIRHCTEEIESTSSN-HTKALARLLRATVYIFTSQSTKAIEDLTQLVED 127
            RAF  E +   I  CTEEI+S+++    K  A  LRAT+++ +  + +  +DL  L+ +
Sbjct: 221 HRAFLEERFEDVISACTEEIDSSAAGGQYKMHALFLRATLHLLSGSAQECEQDLQTLLSN 280

Query: 128 TSVDPKIKVNAHIKRAVVHLHAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQY 187
              D ++++ A I+ A +   A  D       L +AE + P   D Y QR  +     ++
Sbjct: 281 DETDVELRIYAQIRYATLIFQANQDGL-FLGTLSQAEMLCPKNPDIYNQRAMLLSHMKRF 339

Query: 188 EEALRNLDKTIALNPNFHVARAQRHFVVHKMIVP-GDRERVEQSLKEFRNFVDTHSNVVE 246
           EEAL + +    L P+  +    +H   +++ V  GD+ R+E S++  +       +  E
Sbjct: 340 EEALEDFEIAARLAPSHALTVLNKHLADYRIAVKEGDQHRLEMSIQRLQLTTGRFPDCEE 399

Query: 247 ACTLFAQ 253
              + +Q
Sbjct: 400 GLVMLSQ 406


>gi|166368546|ref|YP_001660819.1| hypothetical protein MAE_58050 [Microcystis aeruginosa NIES-843]
 gi|166090919|dbj|BAG05627.1| tetratricopeptide TPR_2 [Microcystis aeruginosa NIES-843]
          Length = 741

 Score = 89.7 bits (221), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 90/386 (23%), Positives = 159/386 (41%), Gaps = 36/386 (9%)

Query: 153 FTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQRH 212
           F +A A  D A +  P+  D++  RG      G++EEA+ + DK +   P++H A   R 
Sbjct: 290 FEEAIASWDRALEFKPDDHDAWNYRGIALGNLGRFEEAIASYDKALEFKPDYHEAWYNRG 349

Query: 213 FVVHKMIVPGDRERVEQSLKEFRNFVDTHSNVVEACTLFAQVLVDQEDFDGAEEYFNRSI 272
             +  +       R+E+++  +   ++   +  EA       L +   F+ A   ++R++
Sbjct: 350 IALKNL------GRLEEAIASWDRALEIKPDKHEAWYNRGVALGNLGRFEEAIASYDRAL 403

Query: 273 RVDPENASLYVHRAMLMLQARGNVDEAIKLIEKAISIDKSCMFAYETLGTIEVQRGRLEE 332
            + P+    + +R +  L   G  +EAI   ++A+ I      A+   G      GR EE
Sbjct: 404 EIKPDKHEAWYNRGV-ALGNLGRFEEAIASYDRALEIKPDKHEAWYNRGVALGNLGRFEE 462

Query: 333 AVKCFNKALPLARDEAELSHIYSLRDAAIAQMKVCER----YNIKKKVSPRSQNITKNEK 388
           A+  +++AL +  D+ E    +  R  A+  +   E     Y+   +  P   +   N  
Sbjct: 463 AIASYDRALEIKPDKHE---AWYNRGVALGNLGRLEEAIASYDRALEFKPDDPDAWYNRG 519

Query: 389 LAIKQLRENNDII--------IRPADKGGKTVVMDKADYT-QKMTSILNSND--YEIIPG 437
           +A+  L    + I        I+P DK         A Y   ++   + S D   E  P 
Sbjct: 520 VALGNLGRFEEAIASYDRALEIKP-DKHEAWYNRGVALYNLGRLEEAIASYDRALEFKPD 578

Query: 438 DPTKTIEESEKYGNLENESGQKHAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFG 497
           DP          GNL            F +A A  D A +  P+  D++Y RG      G
Sbjct: 579 DPDAWNNRGVALGNL----------GRFEQAIASYDRALEFKPDDPDAWYNRGNALDDLG 628

Query: 498 QYEEALRNLDKTIALNPNFHVARAQR 523
           + EEA+ + D+ +   P++H A   R
Sbjct: 629 RLEEAIASYDRALEFKPDYHQAWYNR 654



 Score = 78.6 bits (192), Expect = 8e-12,   Method: Compositional matrix adjust.
 Identities = 89/431 (20%), Positives = 180/431 (41%), Gaps = 29/431 (6%)

Query: 102 LLRATVYIFTSQSTKAIEDLTQLVEDTSVDPKIKVNAHIKRAVVHLHAASDFTKAFADLD 161
             + T + +  Q  +AI    + +E   + P     A   R V  L     F +A A  D
Sbjct: 40  FYQGTTFDYLEQYQEAIASYDRALE---IKPDYH-EAWYNRGVA-LGNLGRFEQAIASYD 94

Query: 162 EAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQRHFVVHKMIVP 221
            A ++ P+  D++  RG      G++E+A+ + D+ + + P++H A   R   +      
Sbjct: 95  RALEIKPDDPDAWNNRGNALYNLGRFEQAIASYDRALEIKPDYHEAWYNRGVAL------ 148

Query: 222 GDRERVEQSLKEFRNFVDTHSNVVEACTLFAQVLVDQEDFDGAEEYFNRSIRVDPENASL 281
           G+  R EQ++  +   ++   +  +A       L +   F+ A   +++++   P+    
Sbjct: 149 GNLGRFEQAIASYDRALEFKPDDPDAWYNRGVALGNLGRFEQAIASYDKALEFKPDYHEA 208

Query: 282 YVHRAMLMLQARGNVDEAIKLIEKAISIDKSCMFAYETLGTIEVQRGRLEEAVKCFNKAL 341
           + +R  + L   G ++EAI   ++A+        A+   G      GR EEA+  +++AL
Sbjct: 209 WYNRG-IALGNLGRLEEAIASWDRALEFKPDDHDAWNYRGIALANLGRFEEAIASWDRAL 267

Query: 342 PLARDEAELSHIYSLRDAAIAQMKVCER----YNIKKKVSPRSQNITKNEKLAIKQLREN 397
               D+ +    ++ R  A+A +   E     ++   +  P   +      +A+  L   
Sbjct: 268 EFKPDDHD---AWNYRGIALANLGRFEEAIASWDRALEFKPDDHDAWNYRGIALGNLGRF 324

Query: 398 NDIIIRPADKGGKTVVMDKADYTQ----KMTSILNSNDYEIIPGDPTKTIE-ESEKYGNL 452
            + I    DK     +  K DY +    +  ++ N    E       + +E + +K+   
Sbjct: 325 EEAIA-SYDK----ALEFKPDYHEAWYNRGIALKNLGRLEEAIASWDRALEIKPDKHEAW 379

Query: 453 ENESGQKHAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIAL 512
            N          F +A A  D A ++ P+  +++Y RG      G++EEA+ + D+ + +
Sbjct: 380 YNRGVALGNLGRFEEAIASYDRALEIKPDKHEAWYNRGVALGNLGRFEEAIASYDRALEI 439

Query: 513 NPNFHVARAQR 523
            P+ H A   R
Sbjct: 440 KPDKHEAWYNR 450



 Score = 77.8 bits (190), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 78/382 (20%), Positives = 160/382 (41%), Gaps = 16/382 (4%)

Query: 147 LHAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHV 206
           L+    F +A A  D A ++ P+  +++Y RG      G++E+A+ + D+ +   P+   
Sbjct: 114 LYNLGRFEQAIASYDRALEIKPDYHEAWYNRGVALGNLGRFEQAIASYDRALEFKPDDPD 173

Query: 207 ARAQRHFVVHKMIVPGDRERVEQSLKEFRNFVDTHSNVVEACTLFAQVLVDQEDFDGAEE 266
           A   R   +      G+  R EQ++  +   ++   +  EA       L +    + A  
Sbjct: 174 AWYNRGVAL------GNLGRFEQAIASYDKALEFKPDYHEAWYNRGIALGNLGRLEEAIA 227

Query: 267 YFNRSIRVDPENASLYVHRAMLMLQARGNVDEAIKLIEKAISIDKSCMFAYETLGTIEVQ 326
            ++R++   P++   + +R  + L   G  +EAI   ++A+        A+   G     
Sbjct: 228 SWDRALEFKPDDHDAWNYRG-IALANLGRFEEAIASWDRALEFKPDDHDAWNYRGIALAN 286

Query: 327 RGRLEEAVKCFNKALPLARDEAELSHIYSLRDAAIAQMKVCER----YNIKKKVSPRSQN 382
            GR EEA+  +++AL    D+ +    ++ R  A+  +   E     Y+   +  P    
Sbjct: 287 LGRFEEAIASWDRALEFKPDDHD---AWNYRGIALGNLGRFEEAIASYDKALEFKPDYHE 343

Query: 383 ITKNEKLAIKQLRENNDIIIRPADKGGKTVVMDKADYTQKMTSILNSNDYEIIPGDPTKT 442
              N  +A+K L    + I    D+  +        +  +  ++ N   +E       + 
Sbjct: 344 AWYNRGIALKNLGRLEEAIA-SWDRALEIKPDKHEAWYNRGVALGNLGRFEEAIASYDRA 402

Query: 443 IE-ESEKYGNLENESGQKHAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEE 501
           +E + +K+    N          F +A A  D A ++ P+  +++Y RG      G++EE
Sbjct: 403 LEIKPDKHEAWYNRGVALGNLGRFEEAIASYDRALEIKPDKHEAWYNRGVALGNLGRFEE 462

Query: 502 ALRNLDKTIALNPNFHVARAQR 523
           A+ + D+ + + P+ H A   R
Sbjct: 463 AIASYDRALEIKPDKHEAWYNR 484



 Score = 69.3 bits (168), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 71/361 (19%), Positives = 147/361 (40%), Gaps = 16/361 (4%)

Query: 168 PNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQRHFVVHKMIVPGDRERV 227
           P   D ++ +G  +    QY+EA+ + D+ + + P++H A   R   +      G+  R 
Sbjct: 33  PQWEDGWFYQGTTFDYLEQYQEAIASYDRALEIKPDYHEAWYNRGVAL------GNLGRF 86

Query: 228 EQSLKEFRNFVDTHSNVVEACTLFAQVLVDQEDFDGAEEYFNRSIRVDPENASLYVHRAM 287
           EQ++  +   ++   +  +A       L +   F+ A   ++R++ + P+    + +R +
Sbjct: 87  EQAIASYDRALEIKPDDPDAWNNRGNALYNLGRFEQAIASYDRALEIKPDYHEAWYNRGV 146

Query: 288 LMLQARGNVDEAIKLIEKAISIDKSCMFAYETLGTIEVQRGRLEEAVKCFNKALPLARDE 347
             L   G  ++AI   ++A+        A+   G      GR E+A+  ++KAL    D 
Sbjct: 147 -ALGNLGRFEQAIASYDRALEFKPDDPDAWYNRGVALGNLGRFEQAIASYDKALEFKPDY 205

Query: 348 AELSHIYSLRDAAIAQMKVCER----YNIKKKVSPRSQNITKNEKLAIKQLRENNDIIIR 403
            E    +  R  A+  +   E     ++   +  P   +      +A+  L    + I  
Sbjct: 206 HE---AWYNRGIALGNLGRLEEAIASWDRALEFKPDDHDAWNYRGIALANLGRFEEAIA- 261

Query: 404 PADKGGKTVVMDKADYTQKMTSILNSNDYEIIPGDPTKTIEESEKYGNLENESGQKHA-A 462
             D+  +    D   +  +  ++ N   +E       + +E      +  N  G      
Sbjct: 262 SWDRALEFKPDDHDAWNYRGIALANLGRFEEAIASWDRALEFKPDDHDAWNYRGIALGNL 321

Query: 463 SDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQ 522
             F +A A  D+A +  P+  +++Y RG      G+ EEA+ + D+ + + P+ H A   
Sbjct: 322 GRFEEAIASYDKALEFKPDYHEAWYNRGIALKNLGRLEEAIASWDRALEIKPDKHEAWYN 381

Query: 523 R 523
           R
Sbjct: 382 R 382



 Score = 60.8 bits (146), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 44/199 (22%), Positives = 91/199 (45%), Gaps = 7/199 (3%)

Query: 145 VHLHAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNF 204
           V L       +A A  D A +  P+  D++Y RG      G++EEA+ + D+ + + P+ 
Sbjct: 486 VALGNLGRLEEAIASYDRALEFKPDDPDAWYNRGVALGNLGRFEEAIASYDRALEIKPDK 545

Query: 205 HVARAQRHFVVHKMIVPGDRERVEQSLKEFRNFVDTHSNVVEACTLFAQVLVDQEDFDGA 264
           H A   R   ++ +       R+E+++  +   ++   +  +A       L +   F+ A
Sbjct: 546 HEAWYNRGVALYNL------GRLEEAIASYDRALEFKPDDPDAWNNRGVALGNLGRFEQA 599

Query: 265 EEYFNRSIRVDPENASLYVHRAMLMLQARGNVDEAIKLIEKAISIDKSCMFAYETLGTIE 324
              ++R++   P++   + +R    L   G ++EAI   ++A+        A+   G   
Sbjct: 600 IASYDRALEFKPDDPDAWYNRGN-ALDDLGRLEEAIASYDRALEFKPDYHQAWYNRGNAL 658

Query: 325 VQRGRLEEAVKCFNKALPL 343
              GRLEEA+  +++A+ +
Sbjct: 659 DDLGRLEEAIASYDQAIKI 677



 Score = 44.7 bits (104), Expect = 0.12,   Method: Compositional matrix adjust.
 Identities = 35/133 (26%), Positives = 59/133 (44%), Gaps = 6/133 (4%)

Query: 145 VHLHAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNF 204
           V L     F +A A  D A +  P+  D++Y RG      G+ EEA+ + D+ +   P++
Sbjct: 588 VALGNLGRFEQAIASYDRALEFKPDDPDAWYNRGNALDDLGRLEEAIASYDRALEFKPDY 647

Query: 205 HVARAQRHFVVHKMIVPGDRERVEQSLKEFRNFVDTHSNVVEACTLFAQVLVDQEDFDGA 264
           H A   R   +       D  R+E+++  +   +  +SN   A    A     Q + + A
Sbjct: 648 HQAWYNRGNALD------DLGRLEEAIASYDQAIKINSNSANAYYNKACCYGLQNNVELA 701

Query: 265 EEYFNRSIRVDPE 277
            E   R+I +D E
Sbjct: 702 IENLQRAINLDVE 714



 Score = 40.0 bits (92), Expect = 3.2,   Method: Compositional matrix adjust.
 Identities = 35/166 (21%), Positives = 79/166 (47%), Gaps = 7/166 (4%)

Query: 145 VHLHAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNF 204
           V L+      +A A  D A +  P+  D++  RG      G++E+A+ + D+ +   P+ 
Sbjct: 554 VALYNLGRLEEAIASYDRALEFKPDDPDAWNNRGVALGNLGRFEQAIASYDRALEFKPDD 613

Query: 205 HVARAQRHFVVHKMIVPGDRERVEQSLKEFRNFVDTHSNVVEACTLFAQVLVDQEDFDGA 264
             A   R   +       D  R+E+++  +   ++   +  +A       L D    + A
Sbjct: 614 PDAWYNRGNALD------DLGRLEEAIASYDRALEFKPDYHQAWYNRGNALDDLGRLEEA 667

Query: 265 EEYFNRSIRVDPENASLYVHRAMLMLQARGNVDEAIKLIEKAISID 310
              ++++I+++  +A+ Y ++A      + NV+ AI+ +++AI++D
Sbjct: 668 IASYDQAIKINSNSANAYYNKACCY-GLQNNVELAIENLQRAINLD 712


>gi|386002705|ref|YP_005921004.1| Tetratricopeptide TPR_2 [Methanosaeta harundinacea 6Ac]
 gi|357210761|gb|AET65381.1| Tetratricopeptide TPR_2 [Methanosaeta harundinacea 6Ac]
          Length = 660

 Score = 89.7 bits (221), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 89/383 (23%), Positives = 163/383 (42%), Gaps = 24/383 (6%)

Query: 141 KRAVVHLHAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIAL 200
           K A   L A     +A A LD A   DP    ++  RG I  + G+YEEA+ + D  +  
Sbjct: 240 KGAAELLRALGRDEEALARLDGAVGADPGDKAAWNDRGLILGVLGRYEEAVESFDAALRA 299

Query: 201 NPNFHVARAQRHFVVHKMIVPGDRERVEQSLKEFRNFVDTHSNVVEACTLFAQVLVDQED 260
           +P + +A   R   +  +       R E++L+ +   +D   +   A     + L D E 
Sbjct: 300 DPGYLLAWNNRGLALANL------GRSEEALESYNRSIDIDPSFALAWYNRGRALFDLER 353

Query: 261 FDGAEEYFNRSIRVDPENASLYVHRAMLMLQARGNVDEAIKLIEKAISIDKSCMFAYETL 320
           +D A E ++ ++ V+P  A  + +R    L A G  +EA++  ++A+ ID     A+   
Sbjct: 354 YDEAVEAYDSALEVEPAFALAWNNRGA-ALAALGREEEALESYDRALEIDPGYEIAWYNR 412

Query: 321 GTIEVQRGRLEEAVKCFNKALPLARDEAELSH-----IYSLRDAAIAQMKVCERYNIKKK 375
           G++    GR  +A+K F++A+      A+  H     +Y +R     +  VC  Y    +
Sbjct: 413 GSVLYLEGRYFDAIKAFDEAIRFNPTSADAWHSKGHALYQMRRP--GEALVC--YEKALE 468

Query: 376 VSPRSQNITKNEKLAIKQLRENNDIIIRPADKGGKTVVMD---KADYTQKMTSILNSNDY 432
           + P       +  +A+  L    +     A+   + + +D   +  + +K     +S   
Sbjct: 469 LDPGRAETWHHRGVALADLNRAAEA----AEAFDRALELDPEYEPPWYRKGILAYSSGRP 524

Query: 433 EIIPGDPTKTIEESEKYGNLENESGQ-KHAASDFTKAFADLDEAEKVDPNVADSYYQRGQ 491
           E      T+  E    +    N  G       D  +A   +D A + D  +A+ +  RG 
Sbjct: 525 EEALAHFTRAAELDPGHAEAWNNRGWILFTLGDTDEALESIDRALEADTALAEGWNNRGV 584

Query: 492 IYCLFGQYEEALRNLDKTIALNP 514
           +    G+ EEAL   ++TI ++P
Sbjct: 585 VLTALGKNEEALEAYNRTIDIDP 607



 Score = 77.4 bits (189), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 90/383 (23%), Positives = 161/383 (42%), Gaps = 51/383 (13%)

Query: 167 DPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQRHFVVHKMIVPGDRER 226
           D   A+ + +  + Y   G  + AL +LD+++AL+P+   A   R  +    +   DRE 
Sbjct: 61  DEESAEGWLEEAERYRQEGAIDLALSSLDRSLALDPDLAEAWVLRGEIALYNLT--DREM 118

Query: 227 VEQSLKEFRNFVDTHSNVV-----EACTLFAQVLVDQEDFDGAEEYFNRSIRVDPENASL 281
             ++ +     +D    VV      A +   +V       D A + +NRS+ +DPEN   
Sbjct: 119 AVEAFERALG-IDPEDGVVWYELGNALSFLGRV-------DEALQAYNRSLTIDPENGKA 170

Query: 282 YVHRAMLMLQARGNVDEAIKLIEKAISIDKSCMFAYETLGTIEVQRGRLEEAVKCFNKAL 341
           + +R  L+L A G  +EA    E+AIS D     A++  G      GR EEA++C+  AL
Sbjct: 171 WNNRG-LILGALGRYEEAASSFERAISSDPDLAAAWQNRGNALRALGRPEEALECYASAL 229

Query: 342 PL-------ARDEAELSHIYSLRDAAIAQMKVCERYNIKKKVSPRSQNITKNEKLAIKQL 394
            +        +  AEL       + A+A++      +   K +   + +        ++ 
Sbjct: 230 AIDSGLVGSWKGAAELLRALGRDEEALARLDGAVGADPGDKAAWNDRGLILGVLGRYEEA 289

Query: 395 RENNDIIIRPADKGGKTVVMDKADYTQKMTSILNSNDYEIIPGDPTKTIEESEKYG-NLE 453
            E+ D  +R AD G                 +L  N+  +   +  ++ E  E Y  +++
Sbjct: 290 VESFDAALR-ADPG----------------YLLAWNNRGLALANLGRSEEALESYNRSID 332

Query: 454 NESGQKHAASDFTKAFADL----------DEAEKVDPNVADSYYQRGQIYCLFGQYEEAL 503
            +     A  +  +A  DL          D A +V+P  A ++  RG      G+ EEAL
Sbjct: 333 IDPSFALAWYNRGRALFDLERYDEAVEAYDSALEVEPAFALAWNNRGAALAALGREEEAL 392

Query: 504 RNLDKTIALNPNFHVARAQRHFV 526
            + D+ + ++P + +A   R  V
Sbjct: 393 ESYDRALEIDPGYEIAWYNRGSV 415



 Score = 68.6 bits (166), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 85/399 (21%), Positives = 155/399 (38%), Gaps = 51/399 (12%)

Query: 121 LTQLVEDTSVDPKIKVNAHIKRAVVHLHAASDFTKAFADLDEAEKVDPNVADSYYQRGQI 180
           L+ L    ++DP +   A + R  + L+  +D   A    + A  +DP     +Y+ G  
Sbjct: 85  LSSLDRSLALDPDL-AEAWVLRGEIALYNLTDREMAVEAFERALGIDPEDGVVWYELGNA 143

Query: 181 YCLFGQYEEALRNLDKTIALNPNFHVARAQRHFVVHKMIVPGDRERVEQSLKEFRNFVDT 240
               G+ +EAL+  ++++ ++P    A   R  ++  +       R E++   F   + +
Sbjct: 144 LSFLGRVDEALQAYNRSLTIDPENGKAWNNRGLILGAL------GRYEEAASSFERAISS 197

Query: 241 HSNVVEACTLFAQVLVDQEDFDGAEEYFNRSIRVDPENASLYVHRAMLMLQARGNVDEAI 300
             ++  A       L      + A E +  ++ +D      +   A L L+A G  +EA+
Sbjct: 198 DPDLAAAWQNRGNALRALGRPEEALECYASALAIDSGLVGSWKGAAEL-LRALGRDEEAL 256

Query: 301 KLIEKAISIDKSCMFAYETLGTIEVQRGRLEEAVKCFNKALPLARDEAELSHIYSLRDAA 360
             ++ A+  D     A+   G I    GR EEAV+ F+ AL   R +      ++ R  A
Sbjct: 257 ARLDGAVGADPGDKAAWNDRGLILGVLGRYEEAVESFDAAL---RADPGYLLAWNNRGLA 313

Query: 361 IAQM----KVCERYNIKKKVSPRSQNITKNEKLAIKQLRENNDIIIRPADKGGKTVVMDK 416
           +A +    +  E YN    + P       N   A+  L   ++ +               
Sbjct: 314 LANLGRSEEALESYNRSIDIDPSFALAWYNRGRALFDLERYDEAV--------------- 358

Query: 417 ADYTQKMTSILNSNDYEIIPGDPTKTIEESEKYGNLENESGQKHAA-SDFTKAFADLDEA 475
               +   S L     E+ P            +    N  G   AA     +A    D A
Sbjct: 359 ----EAYDSAL-----EVEP-----------AFALAWNNRGAALAALGREEEALESYDRA 398

Query: 476 EKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNP 514
            ++DP    ++Y RG +  L G+Y +A++  D+ I  NP
Sbjct: 399 LEIDPGYEIAWYNRGSVLYLEGRYFDAIKAFDEAIRFNP 437



 Score = 63.5 bits (153), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 71/323 (21%), Positives = 139/323 (43%), Gaps = 25/323 (7%)

Query: 55  DTNESHELDLLSKAKRAFEHEDYLTAIRHCTEEIESTSSNHTKALARLLRATVYIFTSQS 114
           D + S  L   ++ +  F+ E Y  A+      +E   +    ALA   R        + 
Sbjct: 332 DIDPSFALAWYNRGRALFDLERYDEAVEAYDSALEVEPA---FALAWNNRGAALAALGRE 388

Query: 115 TKAIEDLTQLVEDTSVDPKIKVNAHIKRAVVHLHAAS-DFTKAFADLDEAEKVDPNVADS 173
            +A+E   + +E   +DP  ++  + + +V++L     D  KAF   DEA + +P  AD+
Sbjct: 389 EEALESYDRALE---IDPGYEIAWYNRGSVLYLEGRYFDAIKAF---DEAIRFNPTSADA 442

Query: 174 YYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQRHFVVHKMIVPGDRERVEQSLKE 233
           ++ +G       +  EAL   +K + L+P     RA+     H+ +   D  R  ++ + 
Sbjct: 443 WHSKGHALYQMRRPGEALVCYEKALELDPG----RAETWH--HRGVALADLNRAAEAAEA 496

Query: 234 FRNFVDTHSNVVEACTLFAQVLVDQEDFDGAEEYFNRSIRVDPENASLYVHRAMLMLQAR 293
           F   ++              +       + A  +F R+  +DP +A  + +R  ++    
Sbjct: 497 FDRALELDPEYEPPWYRKGILAYSSGRPEEALAHFTRAAELDPGHAEAWNNRGWILFTL- 555

Query: 294 GNVDEAIKLIEKAISIDKSCMFAYETLGTIEVQRGRLEEAVKCFNKAL------PLARDE 347
           G+ DEA++ I++A+  D +    +   G +    G+ EEA++ +N+ +      P A + 
Sbjct: 556 GDTDEALESIDRALEADTALAEGWNNRGVVLTALGKNEEALEAYNRTIDIDPAHPRAWNN 615

Query: 348 --AELSHIYSLRDAAIAQMKVCE 368
             A L H+   R+AA    +  E
Sbjct: 616 KGASLYHLGRYREAADCYGRALE 638


>gi|33862569|ref|NP_894129.1| TPR repeat-containing protein [Prochlorococcus marinus str. MIT
           9313]
 gi|33640682|emb|CAE20471.1| TPR repeat [Prochlorococcus marinus str. MIT 9313]
          Length = 1057

 Score = 89.7 bits (221), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 119/522 (22%), Positives = 205/522 (39%), Gaps = 79/522 (15%)

Query: 72  FEHEDYLTAIRHCTEEIESTSSNHTKALARLLRATVYIFTSQSTKAIEDLTQLVEDTSVD 131
           F+ +DY  A+      +E    N   A    +R  V      +  AI D ++ +E   +D
Sbjct: 480 FQLDDYQGALEDFDYALEI---NPNDAETYFMRGNVKGEIGDTEGAISDYSKAIE---ID 533

Query: 132 PKIKVNAHIKRAVVHLHAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEAL 191
           PK   +A   R +   + + D+  A AD ++A ++DP +AD+Y  RG +    G ++ A+
Sbjct: 534 PK-DADAFTNRGLAK-YDSKDYQGAIADYNKAIEIDPQLADAYNNRGLVKDELGDHQGAI 591

Query: 192 RNLDKTIALNPNFHVARAQRHFV---------------------VHKMIVPGDRERVEQS 230
            + +K++ +NP    A   R                         H  +   +R   +  
Sbjct: 592 ADYNKSLDINPQLADAYNNRGLAKYDSKDYQGAIADYNKSLDINPHFALAYNNRGLAKDE 651

Query: 231 LKEFRNFVDTHSNVVEACTLFAQVLV-------DQEDFDGAEEYFNRSIRVDPENASLYV 283
           L   +  +  ++  +E    +A           D  D  GA   +++SI ++P+ A+ Y 
Sbjct: 652 LGNHQGAIADYNKAIEIKPQYANAYFNRGNAKSDLGDTQGAIAVYSKSIEINPQYAAAYY 711

Query: 284 HRAMLMLQARGNVDEAIKLIEKAISIDKSCMFAYETLGTIEVQRGRLEEAVKCFNKALPL 343
           +R     +  G+   AI    KAI I+     AY   G  +      + A+  + KA+ +
Sbjct: 712 NRGNAKRK-LGDNQGAIADCSKAIEINPHFALAYNNRGLAKYDSKDYQGAIADYTKAIEI 770

Query: 344 ARDEAELSHIYSLRDAAIAQMKVCER----YNIKKKVSPRSQNITKNEKLAIKQLRENND 399
              +A+    YS R  A + +   +     Y    ++ P+      N   A   L +   
Sbjct: 771 DPKDADA---YSNRGYAKSHLGDTQGAIADYTKAIEIDPKDAPTYYNRGYAKSHLGDTQG 827

Query: 400 II--------IRPAD------KG-GKTVVMDK----ADYTQKM-----TSILNSN----- 430
            I        I P D      +G  K+ + D     ADYT+ +      +   SN     
Sbjct: 828 AITDYTKAIEIDPKDSDAYSNRGYAKSHLGDTQGAIADYTKAIEIDPKDADAYSNRGLVK 887

Query: 431 -----DYEIIPGDPTKTIEESEKYGN-LENESGQKHAASDFTKAFADLDEAEKVDPNVAD 484
                D++    D TK IE + +Y N   N    K    D+ +A AD  +A ++DP  A 
Sbjct: 888 DEELGDHQGAIADYTKAIEINPQYSNAYYNRGNAKSELKDYQEAIADYTKAIEIDPKDAP 947

Query: 485 SYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQRHFV 526
           +YY RG        Y+EA+ +  K I +NP   +A   R   
Sbjct: 948 AYYNRGNAKSELKDYQEAIADYSKAIEINPQLALAYNNRGLA 989



 Score = 88.6 bits (218), Expect = 8e-15,   Method: Compositional matrix adjust.
 Identities = 94/424 (22%), Positives = 185/424 (43%), Gaps = 27/424 (6%)

Query: 111 TSQSTKAIEDLTQLVEDTSVDPKIKVNAHIKRAVVHLHAASDFTKAFADLDEAEKVDPNV 170
           T  +   I++LT+++E   ++P    +A+  R V       D+  A  D D A +++PN 
Sbjct: 448 TGDTNGKIKELTKVIE---LNPNY-ADAYSLRGVAKFQL-DDYQGALEDFDYALEINPND 502

Query: 171 ADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQRHFVVHKMIVPGDRERVEQS 230
           A++Y+ RG +    G  E A+ +  K I ++P    A   R    +      D +  + +
Sbjct: 503 AETYFMRGNVKGEIGDTEGAISDYSKAIEIDPKDADAFTNRGLAKY------DSKDYQGA 556

Query: 231 LKEFRNFVDTHSNVVEACTLFAQVLVDQEDFDGAEEYFNRSIRVDPENASLYVHRAMLML 290
           + ++   ++    + +A      V  +  D  GA   +N+S+ ++P+ A  Y +R +   
Sbjct: 557 IADYNKAIEIDPQLADAYNNRGLVKDELGDHQGAIADYNKSLDINPQLADAYNNRGLAKY 616

Query: 291 QARGNVDEAIKLIEKAISIDKSCMFAYETLGTIEVQRGRLEEAVKCFNKALPLARDEAEL 350
            ++ +   AI    K++ I+     AY   G  + + G  + A+  +NKA+ +   + + 
Sbjct: 617 DSK-DYQGAIADYNKSLDINPHFALAYNNRGLAKDELGNHQGAIADYNKAIEI---KPQY 672

Query: 351 SHIYSLRDAAIAQMKVCER----YNIKKKVSPRSQNITKNEKLAIKQLRENNDIIIRPAD 406
           ++ Y  R  A + +   +     Y+   +++P+      N   A ++L +N   I   + 
Sbjct: 673 ANAYFNRGNAKSDLGDTQGAIAVYSKSIEINPQYAAAYYNRGNAKRKLGDNQGAIADCS- 731

Query: 407 KGGKTVVMD---KADYTQKMTSILNSNDYEIIPGDPTKTIEESEKYGNLENESG-QKHAA 462
              K + ++      Y  +  +  +S DY+    D TK IE   K  +  +  G  K   
Sbjct: 732 ---KAIEINPHFALAYNNRGLAKYDSKDYQGAIADYTKAIEIDPKDADAYSNRGYAKSHL 788

Query: 463 SDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQ 522
            D   A AD  +A ++DP  A +YY RG      G  + A+ +  K I ++P    A + 
Sbjct: 789 GDTQGAIADYTKAIEIDPKDAPTYYNRGYAKSHLGDTQGAITDYTKAIEIDPKDSDAYSN 848

Query: 523 RHFV 526
           R + 
Sbjct: 849 RGYA 852



 Score = 74.7 bits (182), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 109/501 (21%), Positives = 193/501 (38%), Gaps = 76/501 (15%)

Query: 65  LSKAKRAFEHEDYLTAIRHCTEEIESTSSNHTKALARLLRATVYIFTSQSTKAIEDLTQL 124
           L   K   E +D+  AI    +EIE  S +     A   RA +         AI+D T+ 
Sbjct: 59  LESGKSKLEKKDFYGAIEDLNKEIEINSQD---VAAYSKRANLKEKLGDHKGAIDDFTKA 115

Query: 125 VEDTSVDPKIKVNAHIKRAVVHLHAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLF 184
           +E   +DP    + +  R         D   A AD + A  + P   D Y+ RG      
Sbjct: 116 IE---IDPN-HAHPYYNRGFSKWQLG-DIQGAIADYNHALAIYPLFKDVYFFRGMAKDQI 170

Query: 185 GQYEEALRNLDKTIALNPN------------FHVARAQRH----------FVVHKMIVP- 221
           G ++ A+ +  K I ++P+            FH  +A+            +     I P 
Sbjct: 171 GNFDGAIADYSKVIEIDPDQLYKYRDECSAYFHRGKAKHSSGNISGAIADYSKAIEIDPK 230

Query: 222 -----GDRERVEQSLKE--------------FRNFVDTHSNVVEACTLFAQVLVDQEDFD 262
                 +R  +E  L +              +   +D + +  +A        ++Q DFD
Sbjct: 231 NDSAYNNRGIIEDDLGQRKLDDFYYQLAIADYDKAIDINPSNADAYLNRGHTKLNQRDFD 290

Query: 263 GAEEYFNRSIRVDPENASLYVHRAMLMLQARGNVDEAIKLIEKAISIDKSCMFAYETLGT 322
           GA   FN ++ +DP+  ++Y+ R +   +  GN   AI    KAI ID     AY   G 
Sbjct: 291 GAIADFNHALNIDPQVDNIYLKRGVAKDEL-GNHQGAIADYTKAIEIDPQDALAYNNRGV 349

Query: 323 IEVQRGRLEEAVKCFNKALPLARDEAELSHIYSLRDAAIAQMK--VCERYNIKKKVSPRS 380
            + +    + ++    KA+ +   +++ +  Y  R  +  ++   +    + KK      
Sbjct: 350 AKSKSNDFQGSISDCTKAIEI---DSKYAFAYRNRGHSKKELGDLIGASEDWKKAAELGD 406

Query: 381 QN---ITKNEKLAIKQLRENN---DIIIRPADKGGKTVVMDKADYTQKMTSILNSNDYEI 434
           Q    + K E+L    L +      I  + +++     + D  D   K+  +        
Sbjct: 407 QGAAELLKEERLKTGSLIDQMFQVTIGKQSSNESDGLDLSDTGDTNGKIKEL-------- 458

Query: 435 IPGDPTKTIEESEKYGNLENESG-QKHAASDFTKAFADLDEAEKVDPNVADSYYQRGQIY 493
                TK IE +  Y +  +  G  K    D+  A  D D A +++PN A++Y+ RG + 
Sbjct: 459 -----TKVIELNPNYADAYSLRGVAKFQLDDYQGALEDFDYALEINPNDAETYFMRGNVK 513

Query: 494 CLFGQYEEALRNLDKTIALNP 514
              G  E A+ +  K I ++P
Sbjct: 514 GEIGDTEGAISDYSKAIEIDP 534



 Score = 73.9 bits (180), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 118/483 (24%), Positives = 206/483 (42%), Gaps = 65/483 (13%)

Query: 94  NHTKALARLLRATVYIFTSQSTKAIEDLTQLVEDTS----VDP------KIKVNAHIKRA 143
           NH  A+  L +  VY F   +   I +    + D S    +DP      + + +A+  R 
Sbjct: 147 NHALAIYPLFK-DVYFFRGMAKDQIGNFDGAIADYSKVIEIDPDQLYKYRDECSAYFHRG 205

Query: 144 VVHLHAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQ-------YEEALRNLDK 196
               H++ + + A AD  +A ++DP    +Y  RG I    GQ       Y+ A+ + DK
Sbjct: 206 KAK-HSSGNISGAIADYSKAIEIDPKNDSAYNNRGIIEDDLGQRKLDDFYYQLAIADYDK 264

Query: 197 TIALNPNFHVARAQRHFVVHKMIVPGDRERVEQSLKEFRNFVDTHSNVVEACTLFAQVLV 256
            I +NP+   A   R    H  +   ++   + ++ +F + ++     V+   L   V  
Sbjct: 265 AIDINPSNADAYLNRG---HTKL---NQRDFDGAIADFNHALNIDPQ-VDNIYLKRGVAK 317

Query: 257 DQ-EDFDGAEEYFNRSIRVDPENASLYVHRAMLMLQARGNVDEAIKLIEKAISIDKSCMF 315
           D+  +  GA   + ++I +DP++A  Y +R +   ++  +   +I    KAI ID    F
Sbjct: 318 DELGNHQGAIADYTKAIEIDPQDALAYNNRGVAKSKSN-DFQGSISDCTKAIEIDSKYAF 376

Query: 316 AYETLGTIEVQRGRLEEAVKCFNKALPLA-RDEAELSHIYSLRDAA-IAQMKVCERYNIK 373
           AY   G  + + G L  A + + KA  L  +  AEL     L+  + I QM    +  I 
Sbjct: 377 AYRNRGHSKKELGDLIGASEDWKKAAELGDQGAAELLKEERLKTGSLIDQM---FQVTIG 433

Query: 374 KKVSPRSQNI----TKNEKLAIKQLRENNDIIIRPAD----KGGKTVVMDKADYTQKMTS 425
           K+ S  S  +    T +    IK+L +  ++    AD    +G     +D  DY   +  
Sbjct: 434 KQSSNESDGLDLSDTGDTNGKIKELTKVIELNPNYADAYSLRGVAKFQLD--DYQGALED 491

Query: 426 I-----LNSNDYEI------IPG----------DPTKTIEESEKYGN-LENESGQKHAAS 463
                 +N ND E       + G          D +K IE   K  +   N    K+ + 
Sbjct: 492 FDYALEINPNDAETYFMRGNVKGEIGDTEGAISDYSKAIEIDPKDADAFTNRGLAKYDSK 551

Query: 464 DFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQR 523
           D+  A AD ++A ++DP +AD+Y  RG +    G ++ A+ + +K++ +NP    A   R
Sbjct: 552 DYQGAIADYNKAIEIDPQLADAYNNRGLVKDELGDHQGAIADYNKSLDINPQLADAYNNR 611

Query: 524 HFV 526
              
Sbjct: 612 GLA 614



 Score = 71.6 bits (174), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 100/450 (22%), Positives = 181/450 (40%), Gaps = 31/450 (6%)

Query: 72   FEHEDYLTAIRHCTEEIESTSSNHTKALARLLRATVYIFTSQSTKAIEDLTQLVEDTSVD 131
            ++ +DY  AI    + ++    N   ALA   R            AI D  + +E   + 
Sbjct: 616  YDSKDYQGAIADYNKSLDI---NPHFALAYNNRGLAKDELGNHQGAIADYNKAIE---IK 669

Query: 132  PKIKVNAHIKRAVVHLHAASDFT---KAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYE 188
            P+   NA+  R     +A SD      A A   ++ +++P  A +YY RG      G  +
Sbjct: 670  PQY-ANAYFNRG----NAKSDLGDTQGAIAVYSKSIEINPQYAAAYYNRGNAKRKLGDNQ 724

Query: 189  EALRNLDKTIALNPNFHVARAQRHFVVHKMIVPGDRERVEQSLKEFRNFVDTHSNVVEAC 248
             A+ +  K I +NP+F +A   R    +      D +  + ++ ++   ++      +A 
Sbjct: 725  GAIADCSKAIEINPHFALAYNNRGLAKY------DSKDYQGAIADYTKAIEIDPKDADAY 778

Query: 249  TLFAQVLVDQEDFDGAEEYFNRSIRVDPENASLYVHRAMLMLQARGNVDEAIKLIEKAIS 308
            +          D  GA   + ++I +DP++A  Y +R        G+   AI    KAI 
Sbjct: 779  SNRGYAKSHLGDTQGAIADYTKAIEIDPKDAPTYYNRGYAKSHL-GDTQGAITDYTKAIE 837

Query: 309  IDKSCMFAYETLGTIEVQRGRLEEAVKCFNKALPL-ARDEAELSHIYSLRDAAIA-QMKV 366
            ID     AY   G  +   G  + A+  + KA+ +  +D    S+   ++D  +      
Sbjct: 838  IDPKDSDAYSNRGYAKSHLGDTQGAIADYTKAIEIDPKDADAYSNRGLVKDEELGDHQGA 897

Query: 367  CERYNIKKKVSPRSQNITKNEKLAIKQLRENNDIIIRPADKGGKTVVMDKAD---YTQKM 423
               Y    +++P+  N   N   A  +L++  + I        K + +D  D   Y  + 
Sbjct: 898  IADYTKAIEINPQYSNAYYNRGNAKSELKDYQEAIADYT----KAIEIDPKDAPAYYNRG 953

Query: 424  TSILNSNDYEIIPGDPTKTIEESEKYGNLENESG-QKHAASDFTKAFADLDEAEKVDPNV 482
             +     DY+    D +K IE + +     N  G  K+ + D+    AD ++A ++DP  
Sbjct: 954  NAKSELKDYQEAIADYSKAIEINPQLALAYNNRGLAKYDSKDYQGTIADYNKAIEIDPQY 1013

Query: 483  ADSYYQRGQIYCLFGQYEEALRNLDKTIAL 512
            A++Y  RG      G  + A  +  K   L
Sbjct: 1014 ANAYKNRGNAKKELGVLKGACEDWKKAAEL 1043



 Score = 58.9 bits (141), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 59/242 (24%), Positives = 107/242 (44%), Gaps = 27/242 (11%)

Query: 117  AIEDLTQLVEDTSVDPKIKVNAHIKRAVVHLHAASDFTKAFADLDEAEKVDPNVADSYYQ 176
            AI D T+ +E   +DPK   +A+  R     H   D   A AD  +A ++DP  AD+Y  
Sbjct: 828  AITDYTKAIE---IDPK-DSDAYSNRGYAKSHLG-DTQGAIADYTKAIEIDPKDADAYSN 882

Query: 177  RGQIYCL-FGQYEEALRNLDKTIALNPNFHVARAQRHFVVHKMIVPGDRERVEQSLKEFR 235
            RG +     G ++ A+ +  K I +NP +  A   R                +  LK+++
Sbjct: 883  RGLVKDEELGDHQGAIADYTKAIEINPQYSNAYYNRG-------------NAKSELKDYQ 929

Query: 236  NFVDTHSNVVEACTLFAQVLVDQ-------EDFDGAEEYFNRSIRVDPENASLYVHRAML 288
              +  ++  +E     A    ++       +D+  A   ++++I ++P+ A  Y +R + 
Sbjct: 930  EAIADYTKAIEIDPKDAPAYYNRGNAKSELKDYQEAIADYSKAIEINPQLALAYNNRGLA 989

Query: 289  MLQARGNVDEAIKLIEKAISIDKSCMFAYETLGTIEVQRGRLEEAVKCFNKALPLARDEA 348
               ++ +    I    KAI ID     AY+  G  + + G L+ A + + KA  L  ++A
Sbjct: 990  KYDSK-DYQGTIADYNKAIEIDPQYANAYKNRGNAKKELGVLKGACEDWKKAAELGNEDA 1048

Query: 349  EL 350
             L
Sbjct: 1049 AL 1050



 Score = 48.1 bits (113), Expect = 0.011,   Method: Compositional matrix adjust.
 Identities = 78/300 (26%), Positives = 123/300 (41%), Gaps = 50/300 (16%)

Query: 256 VDQEDFDGAEEYFNRSIRVDPENASLYVHRAMLMLQARGNVDEAIKLIEKAISIDKSCMF 315
           ++++DF GA E  N+ I ++ ++ + Y  RA L  +  G+   AI    KAI ID +   
Sbjct: 66  LEKKDFYGAIEDLNKEIEINSQDVAAYSKRANLK-EKLGDHKGAIDDFTKAIEIDPNHAH 124

Query: 316 AYETLGTIEVQRGRLEEAVKCFNKAL---PLARDEAELSHIYSLR----------DAAIA 362
            Y   G  + Q G ++ A+  +N AL   PL +D      +Y  R          D AIA
Sbjct: 125 PYYNRGFSKWQLGDIQGAIADYNHALAIYPLFKD------VYFFRGMAKDQIGNFDGAIA 178

Query: 363 QM-KV--------------CERYNIKKKVSPRSQNITKNEKLAIKQLRENNDIIIRPADK 407
              KV              C  Y  + K    S NI+     AI    +   I I P + 
Sbjct: 179 DYSKVIEIDPDQLYKYRDECSAYFHRGKAKHSSGNISG----AIADYSKA--IEIDPKND 232

Query: 408 GG---KTVVMDKADYTQKMTSILNSNDYEIIPGDPTKTIEESEKYGNLE-NESGQKHAAS 463
                + ++ D  D  Q+    L+   Y++   D  K I+ +    +   N    K    
Sbjct: 233 SAYNNRGIIED--DLGQRK---LDDFYYQLAIADYDKAIDINPSNADAYLNRGHTKLNQR 287

Query: 464 DFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQR 523
           DF  A AD + A  +DP V + Y +RG      G ++ A+ +  K I ++P   +A   R
Sbjct: 288 DFDGAIADFNHALNIDPQVDNIYLKRGVAKDELGNHQGAIADYTKAIEIDPQDALAYNNR 347


>gi|13472041|ref|NP_103608.1| hypothetical protein mll2208 [Mesorhizobium loti MAFF303099]
 gi|14022786|dbj|BAB49394.1| mll2208 [Mesorhizobium loti MAFF303099]
          Length = 551

 Score = 89.7 bits (221), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 100/410 (24%), Positives = 184/410 (44%), Gaps = 43/410 (10%)

Query: 118 IEDLTQLVEDTSVDPKIKVNAHIKRAVVHLHAASDFTKAFADLDEAEKVDPNVADSYYQR 177
           I   T ++ED +     +  A+  RA   +    D   AFAD D+A  ++P ++ +YY  
Sbjct: 43  IAACTAIIEDKAEASDNRAAAYFNRAGALIRR-GDNDDAFADYDKAIGINPELSAAYYNN 101

Query: 178 GQIYCLFGQYEEALRNLDKTIALNPNFHVARAQRHFVVHKMIVPGDRERVEQSLKEFRNF 237
           G I  L G Y+ A+  LD+ I L+P+         F  ++ +    +   E+++ ++   
Sbjct: 102 GIILVLKGDYDRAITYLDQAIFLDPD------NAEFYYNRGVAWSYKGNDERAIADYDAA 155

Query: 238 VDTHSNVVEACTLFAQVLVDQEDFDGAEEYFNRSIRVDPENASLYVHRAMLMLQARGNVD 297
           +  +     A          + D + A   ++++I +DP+NAS Y +R      ++G+ D
Sbjct: 156 IKLNPGDARAYHNRGLNWARKGDKERAIADYSQAISLDPKNASSYNNRGD-AWDSKGDDD 214

Query: 298 EAIKLIEKAISIDKSCMFAYETLGTIEVQRGRLEEAVKCFNKALPLARDEAELSHIYSLR 357
            A+    + I +D     AY   G I  ++G    A+  +++ + L  D  + S  Y+  
Sbjct: 215 RAMADYNQVIILDTKNAHAYYRRGLIWSRKGDDSRAIADYSQVISL--DPTDPSIRYN-- 270

Query: 358 DAAIAQMKVCERYNIKKKVSPRSQNITKNEKLAIKQLRENNDIIIRPADKGGKTVVMDKA 417
              +A ++   + +  + ++   + I  + K+A               D+G  T  + K 
Sbjct: 271 -KGLAWLR---KGDGDRAIADFDEAIRLDPKMAAAYY-----------DRG--TEWLRKG 313

Query: 418 DYTQKMTSILNSNDY-EIIPGDPTKTIEESEKYGNLENESGQKHAASDFTKAFADLDEAE 476
           D  + +T      DY E+I  +PT  +  +++ G + NE G+      + +A ADL+ A 
Sbjct: 314 DRDRAIT------DYSEVITLEPTNAMALNDR-GFVLNELGE------YERALADLNRAI 360

Query: 477 KVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQRHFV 526
            +DP  A  Y  R       G +  AL + ++ IAL+PNF  A A R FV
Sbjct: 361 GLDPKQAKIYSNRAIARAAKGDFAPALADYNQAIALDPNFPNAYAGRGFV 410



 Score = 81.3 bits (199), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 66/248 (26%), Positives = 108/248 (43%), Gaps = 46/248 (18%)

Query: 104 RATVYIFTSQSTKAIEDLTQLVEDTSVDPKIKVNAHIKRAVVHLHAASDFTKAFADLDEA 163
           R  ++      ++AI D +Q++     DP I+ N    + +  L    D  +A AD DEA
Sbjct: 237 RGLIWSRKGDDSRAIADYSQVISLDPTDPSIRYN----KGLAWLRK-GDGDRAIADFDEA 291

Query: 164 EKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQRHFVVHKMIVPGD 223
            ++DP +A +YY RG  +   G  + A+ +  + I L P   +A   R FV++++   G+
Sbjct: 292 IRLDPKMAAAYYDRGTEWLRKGDRDRAITDYSEVITLEPTNAMALNDRGFVLNEL---GE 348

Query: 224 RERVEQSLKEFRNFVDTHSNVVEACTLFAQVLVDQEDFDGAEEYFNRSIRVDPENASLYV 283
            ER    L                                     NR+I +DP+ A +Y 
Sbjct: 349 YERALADL-------------------------------------NRAIGLDPKQAKIYS 371

Query: 284 HRAMLMLQARGNVDEAIKLIEKAISIDKSCMFAYETLGTIEVQRGRLEEAVKCFNKALPL 343
           +RA +   A+G+   A+    +AI++D +   AY   G +    G L +A   F KA  L
Sbjct: 372 NRA-IARAAKGDFAPALADYNQAIALDPNFPNAYAGRGFVNFYSGMLAKAEPDFAKAAAL 430

Query: 344 ARDEAELS 351
           A D A L+
Sbjct: 431 APDNAYLA 438



 Score = 51.2 bits (121), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 65/268 (24%), Positives = 107/268 (39%), Gaps = 38/268 (14%)

Query: 279 ASLYVHRAMLMLQARGNVDEAIKLIEKAISIDKSCMFAYETLGTIEVQRGRLEEAVKCFN 338
           A+ Y +RA  +++ RG+ D+A    +KAI I+     AY   G I V +G  + A+   +
Sbjct: 61  AAAYFNRAGALIR-RGDNDDAFADYDKAIGINPELSAAYYNNGIILVLKGDYDRAITYLD 119

Query: 339 KALPLARDEAELSHIYSLRDAAIAQMKVCER----YNIKKKVSPRSQNITKNEKLAIKQL 394
           +A+ L  D AE    Y  R  A +     ER    Y+   K++P       N  L     
Sbjct: 120 QAIFLDPDNAEF---YYNRGVAWSYKGNDERAIADYDAAIKLNPGDARAYHNRGLNW--- 173

Query: 395 RENNDIIIRPADKGGKTVVMDKADYTQKMT-------SILNSNDYEIIPGDPTKTIEESE 447
                     A KG K   +  ADY+Q ++       S  N  D     GD  + + +  
Sbjct: 174 ----------ARKGDKERAI--ADYSQAISLDPKNASSYNNRGDAWDSKGDDDRAMADYN 221

Query: 448 KYGNLENESGQKH--------AASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQY 499
           +   L+ ++   +           D ++A AD  +   +DP      Y +G  +   G  
Sbjct: 222 QVIILDTKNAHAYYRRGLIWSRKGDDSRAIADYSQVISLDPTDPSIRYNKGLAWLRKGDG 281

Query: 500 EEALRNLDKTIALNPNFHVARAQRHFVW 527
           + A+ + D+ I L+P    A   R   W
Sbjct: 282 DRAIADFDEAIRLDPKMAAAYYDRGTEW 309



 Score = 45.4 bits (106), Expect = 0.085,   Method: Compositional matrix adjust.
 Identities = 25/75 (33%), Positives = 38/75 (50%)

Query: 454 NESGQKHAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALN 513
           N +G      D   AFAD D+A  ++P ++ +YY  G I  L G Y+ A+  LD+ I L+
Sbjct: 66  NRAGALIRRGDNDDAFADYDKAIGINPELSAAYYNNGIILVLKGDYDRAITYLDQAIFLD 125

Query: 514 PNFHVARAQRHFVWT 528
           P+       R   W+
Sbjct: 126 PDNAEFYYNRGVAWS 140



 Score = 42.4 bits (98), Expect = 0.59,   Method: Compositional matrix adjust.
 Identities = 38/125 (30%), Positives = 56/125 (44%), Gaps = 11/125 (8%)

Query: 82  RHCTEEIESTSSNHTKALARLLRATVYIFTSQSTKAIEDLTQLVEDTSVDPK---IKVNA 138
           R  T+  E  +   T A+A   R  V     +  +A+ DL + +    +DPK   I  N 
Sbjct: 317 RAITDYSEVITLEPTNAMALNDRGFVLNELGEYERALADLNRAI---GLDPKQAKIYSNR 373

Query: 139 HIKRAVVHLHAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTI 198
            I RA     A  DF  A AD ++A  +DPN  ++Y  RG +    G   +A  +  K  
Sbjct: 374 AIARA-----AKGDFAPALADYNQAIALDPNFPNAYAGRGFVNFYSGMLAKAEPDFAKAA 428

Query: 199 ALNPN 203
           AL P+
Sbjct: 429 ALAPD 433


>gi|386002707|ref|YP_005921006.1| Tetratricopeptide TPR_2 [Methanosaeta harundinacea 6Ac]
 gi|357210763|gb|AET65383.1| Tetratricopeptide TPR_2 [Methanosaeta harundinacea 6Ac]
          Length = 949

 Score = 89.7 bits (221), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 78/369 (21%), Positives = 159/369 (43%), Gaps = 30/369 (8%)

Query: 161 DEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQRHFVVHKMIV 220
           D A  +DP++ D +Y +G      G++EEA +  D  + ++P +H A   +    + +  
Sbjct: 219 DRAIDIDPSLTDVWYNKGIALYALGRHEEAFKCYDAAVEIDPLYHPAWFNKGLAFYSL-- 276

Query: 221 PGDRERVEQSLKEFRNFVDTHSNVVEACTLFAQVLVDQEDFDGAEEYFNRSIRVDPENAS 280
                RVE+++  +   +D   ++V         L     FD A+E + R++ +DPE ++
Sbjct: 277 ----GRVEEAIDCYDRAIDIDPSLVAVWNNKGNALYALGRFDEAQECYRRAVEIDPEYSN 332

Query: 281 LYVHRAMLMLQARGNVDEAIKLIEKAISIDKSCMFAYETLGTIEVQRGRLEEAVKCFNKA 340
            + +  + +LQ  G  +EA++  ++ I ID +   A+   G      GR +EA  C+++ 
Sbjct: 333 PWYNLGV-VLQRLGRGEEALEAYDRLIEIDPNLSEAWYNRGLALYSLGRYDEAAGCYDRV 391

Query: 341 LPLARDEAELSHIYSLRDAAIAQMK-VCERYNIKKKVSPRSQNITKNEKLAIKQLRENND 399
           L +  +  ++ +  +L   ++ + +   + Y+   +  PR   +  N    +  L   N+
Sbjct: 392 LEIDPENGDVWYDKALALGSLGRYEEALDCYDEALEAGPRRPEVLNNRCNILYSLERYNE 451

Query: 400 IIIRPADKGGKTVVMDKADYTQKMTSILNSNDYEIIPGDPTKTIEESEKYGNLENESGQK 459
            +    D  G     + A Y + + ++     YE          E S  YG     +G +
Sbjct: 452 SVGCYGDVIGIDPGYENAWYNRGV-ALYTLGRYE----------EASASYGEAAALNGSR 500

Query: 460 -----------HAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDK 508
                       AA  + +A    D A  + P     +Y RG +     + EEA+ + D+
Sbjct: 501 VDAWVGMGDAFAAAGIYDRAVEAYDGAIALYPGDPAVWYNRGLLLYNASRLEEAVESFDE 560

Query: 509 TIALNPNFH 517
            I ++P++ 
Sbjct: 561 VIEIDPSYE 569



 Score = 70.9 bits (172), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 75/381 (19%), Positives = 155/381 (40%), Gaps = 30/381 (7%)

Query: 145 VHLHAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNF 204
           + L++   + +A    DEA   DP   D +YQ+G   C  G+YE+A+ + D  I ++ + 
Sbjct: 135 LALYSLGRYEEAVRSYDEAIVFDPAQGDLWYQKGLALCGLGRYEKAIESYDFAITIDGDD 194

Query: 205 HVARAQRHFVVHKMIVPGDRERVEQSLKEFRNFVDTHSNVVEACTLFAQVLVDQEDFDGA 264
             +   +   ++ +       R E+++  +   +D   ++ +        L      + A
Sbjct: 195 AASWHGKALALYSL------GRAEEAIDCYDRAIDIDPSLTDVWYNKGIALYALGRHEEA 248

Query: 265 EEYFNRSIRVDPENASLYVHRAMLMLQARGNVDEAIKLIEKAISIDKSCMFAYETLGTIE 324
            + ++ ++ +DP     + ++  L   + G V+EAI   ++AI ID S +  +   G   
Sbjct: 249 FKCYDAAVEIDPLYHPAWFNKG-LAFYSLGRVEEAIDCYDRAIDIDPSLVAVWNNKGNAL 307

Query: 325 VQRGRLEEAVKCFNKALPLARDEAELSHIYSLRDAAIAQM----KVCERYNIKKKVSPRS 380
              GR +EA +C+ +A+ +   + E S+ +      + ++    +  E Y+   ++ P  
Sbjct: 308 YALGRFDEAQECYRRAVEI---DPEYSNPWYNLGVVLQRLGRGEEALEAYDRLIEIDPNL 364

Query: 381 QNITKNEKLAIKQLRENNDII-----IRPADKGGKTVVMDKA---DYTQKMTSILNSNDY 432
                N  LA+  L   ++       +   D     V  DKA       +    L+  D 
Sbjct: 365 SEAWYNRGLALYSLGRYDEAAGCYDRVLEIDPENGDVWYDKALALGSLGRYEEALDCYDE 424

Query: 433 EIIPGDPTKTIEESEKYGNLENESGQKHAASDFTKAFADLDEAEKVDPNVADSYYQRGQI 492
            +  G     +        L N     ++   + ++     +   +DP   +++Y RG  
Sbjct: 425 ALEAGPRRPEV--------LNNRCNILYSLERYNESVGCYGDVIGIDPGYENAWYNRGVA 476

Query: 493 YCLFGQYEEALRNLDKTIALN 513
               G+YEEA  +  +  ALN
Sbjct: 477 LYTLGRYEEASASYGEAAALN 497



 Score = 64.7 bits (156), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 89/413 (21%), Positives = 179/413 (43%), Gaps = 55/413 (13%)

Query: 104 RATVYIFTSQSTKAIEDLTQLVEDTSVDPKIKVNAHIKRAVVHLHAASDFTKAFADLDEA 163
           R  +    S+  +A+E   +++E   +DP  +    +K   ++    SD  +A    DEA
Sbjct: 541 RGLLLYNASRLEEAVESFDEVIE---IDPSYEGVWRLKGLALYALGRSD--EAIDCYDEA 595

Query: 164 EKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQRHFVVHKMIVPGD 223
            ++ P+    +Y RG +    G+Y EA+ + D+ I L+      R ++   ++ +     
Sbjct: 596 LEISPSEVSLWYNRGVVLFSLGRYGEAIESYDRVIELD------RYEKGEALYSL----- 644

Query: 224 RERVEQSLKEFRNFVDTHSNVVEACTLFAQVLVDQ--EDFDGAEEYFNRSIRVDPENASL 281
             R +++++ +   ++     +EA   + + L  Q   D++ + E ++R + +DP    +
Sbjct: 645 -GRYDEAIECYEKVLEVSP--LEAKAWYQKGLAHQILGDYERSAECYDRVVEIDPGYEEV 701

Query: 282 YVHRAMLMLQARGNVDEAIKLIEKAISIDKSCMFAYETLGTIEVQRGRLEEAVKCFNKAL 341
            + R  ++L+  G+ D A+   + A+  D   + A    G   +  GR EEA   F++ L
Sbjct: 702 ILRRGFVLLRL-GDYDGALASYDLALQEDPDDLEAARGRGEALLALGRFEEASATFDRIL 760

Query: 342 PLARDEAELSHIYSLRDAAIAQMKVCERYNIKKKVSPRSQNITKNEKLAIKQLRENNDII 401
             A ++    H    R  A+A +    RY+       R+  I  ++ L          + 
Sbjct: 761 ANASEDGGAWHG---RGLALAGLL---RYDEAIDSYDRAIAINSSDNL----------LW 804

Query: 402 IRPADKGGKTVVMDKADYTQKMTSILNSNDYEIIPGDPTKTIEESEKYGNLENESGQKHA 461
           I      G+  V+++A    ++   + S D  I         E+ E + ++   +  K  
Sbjct: 805 I------GRGGVLEEA---GRLEDAVASFDRAI-----ALDQEDPEAW-SMRGRALMK-- 847

Query: 462 ASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNP 514
           A     A A  D A  +DP+  ++   RG ++   G+ EEA+   +  IAL+P
Sbjct: 848 AGRLEDAAASFDRAIALDPSSGEAQRGRGSVFEAQGRAEEAIGCYEAAIALDP 900



 Score = 64.3 bits (155), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 68/294 (23%), Positives = 129/294 (43%), Gaps = 19/294 (6%)

Query: 54  GDTNESH----ELDLLSKAKRAFEHEDYLTAIRHCTEEIESTSSNHTKALARLLRATVYI 109
           G+  ES+    ELD   K +  +    Y  AI  C E++   S    KA  +  +   + 
Sbjct: 620 GEAIESYDRVIELDRYEKGEALYSLGRYDEAI-ECYEKVLEVSPLEAKAWYQ--KGLAHQ 676

Query: 110 FTSQSTKAIEDLTQLVEDTSVDPKIKVNAHIKRAVVHLHAASDFTKAFADLDEAEKVDPN 169
                 ++ E   ++VE   +DP  +    ++R  V L    D+  A A  D A + DP+
Sbjct: 677 ILGDYERSAECYDRVVE---IDPGYE-EVILRRGFVLLRLG-DYDGALASYDLALQEDPD 731

Query: 170 VADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQRHFVVHKMIVPGDRERVEQ 229
             ++   RG+     G++EEA    D+ +A       A   R   +  ++      R ++
Sbjct: 732 DLEAARGRGEALLALGRFEEASATFDRILANASEDGGAWHGRGLALAGLL------RYDE 785

Query: 230 SLKEFRNFVDTHSNVVEACTLFAQVLVDQEDFDGAEEYFNRSIRVDPENASLYVHRAMLM 289
           ++  +   +  +S+          VL +    + A   F+R+I +D E+   +  R   +
Sbjct: 786 AIDSYDRAIAINSSDNLLWIGRGGVLEEAGRLEDAVASFDRAIALDQEDPEAWSMRGRAL 845

Query: 290 LQARGNVDEAIKLIEKAISIDKSCMFAYETLGTIEVQRGRLEEAVKCFNKALPL 343
           ++A G +++A    ++AI++D S   A    G++   +GR EEA+ C+  A+ L
Sbjct: 846 MKA-GRLEDAAASFDRAIALDPSSGEAQRGRGSVFEAQGRAEEAIGCYEAAIAL 898



 Score = 61.2 bits (147), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 68/359 (18%), Positives = 153/359 (42%), Gaps = 26/359 (7%)

Query: 166 VDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQRHFVVHKMIVPGDRE 225
           +DP   D++  +G I    G+ +EAL   ++++ ++P        + FV++ + +     
Sbjct: 54  IDPAYPDAWSLKGYILSDLGRLDEALSCFNRSLEIDPQDPHIWYSKGFVLYGLGI----- 108

Query: 226 RVEQSLKEFRNFVDTHSNVVEACTLFAQVLVDQEDFDGAEEYFNRSIRVDPENASLYVHR 285
             ++++  +   ++ +S   +        L     ++ A   ++ +I  DP    L+  +
Sbjct: 109 -YDEAIDCYDRAMEFNSTGPDLWRARGLALYSLGRYEEAVRSYDEAIVFDPAQGDLWYQK 167

Query: 286 AMLMLQARGNVDEAIKLIEKAISIDKSCMFAYETLGTIEVQRGRLEEAVKCFNKALPLAR 345
             L L   G  ++AI+  + AI+ID     ++          GR EEA+ C+++A+ +  
Sbjct: 168 G-LALCGLGRYEKAIESYDFAITIDGDDAASWHGKALALYSLGRAEEAIDCYDRAIDI-- 224

Query: 346 DEAELSHIYSLRDAAIAQMKVCER----YNIKKKVSPRSQNITKNEKLA---IKQLRENN 398
            +  L+ ++  +  A+  +   E     Y+   ++ P       N+ LA   + ++ E  
Sbjct: 225 -DPSLTDVWYNKGIALYALGRHEEAFKCYDAAVEIDPLYHPAWFNKGLAFYSLGRVEEAI 283

Query: 399 DIIIRPADKGGKTVVMDKADYTQKMTSILNSNDYEIIPGDPTKTIEESEKYGNLENESG- 457
           D   R  D     V +    +  K  ++     ++       + +E   +Y N     G 
Sbjct: 284 DCYDRAIDIDPSLVAV----WNNKGNALYALGRFDEAQECYRRAVEIDPEYSNPWYNLGV 339

Query: 458 --QKHAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNP 514
             Q+    +  +A    D   ++DPN+++++Y RG      G+Y+EA    D+ + ++P
Sbjct: 340 VLQRLGRGE--EALEAYDRLIEIDPNLSEAWYNRGLALYSLGRYDEAAGCYDRVLEIDP 396



 Score = 60.8 bits (146), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 86/410 (20%), Positives = 163/410 (39%), Gaps = 61/410 (14%)

Query: 118 IEDLTQLVEDTS-------VDPKIKVNAHI--KRAVVHLHAASDFTKAFADLDEAEKVDP 168
           + DL +L E  S       +DP+   + HI   +  V L+    + +A    D A + + 
Sbjct: 69  LSDLGRLDEALSCFNRSLEIDPQ---DPHIWYSKGFV-LYGLGIYDEAIDCYDRAMEFNS 124

Query: 169 NVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQRHFVVHKMIVPGDRERVE 228
              D +  RG      G+YEEA+R+ D+ I  +P      AQ      K +      R E
Sbjct: 125 TGPDLWRARGLALYSLGRYEEAVRSYDEAIVFDP------AQGDLWYQKGLALCGLGRYE 178

Query: 229 QSLKEFRNFVDTHSNVVEACTLFAQVLVDQEDFDGAEEYFNRSIRVDPENASLYVHRAML 288
           ++++ +   +    +   +    A  L      + A + ++R+I +DP    ++ ++  +
Sbjct: 179 KAIESYDFAITIDGDDAASWHGKALALYSLGRAEEAIDCYDRAIDIDPSLTDVWYNKG-I 237

Query: 289 MLQARGNVDEAIKLIEKAISIDKSCMFAYETLGTIEVQRGRLEEAVKCFNKALPLARDEA 348
            L A G  +EA K  + A+ ID     A+   G      GR+EEA+ C+++A+ +   + 
Sbjct: 238 ALYALGRHEEAFKCYDAAVEIDPLYHPAWFNKGLAFYSLGRVEEAIDCYDRAIDI---DP 294

Query: 349 ELSHIYSLRDAAIAQM----KVCERYNIKKKVSPRSQNITKNEKLAIKQLRENNDIIIRP 404
            L  +++ +  A+  +    +  E Y    ++ P   N   N  + +++L          
Sbjct: 295 SLVAVWNNKGNALYALGRFDEAQECYRRAVEIDPEYSNPWYNLGVVLQRL---------- 344

Query: 405 ADKGGKTVVMDKADYTQKMTSILNSNDYEIIPGDPTKTIEESEKYGNLENESGQKHAASD 464
                            +    L + D  +I  DP      SE +    N     ++   
Sbjct: 345 ----------------GRGEEALEAYD-RLIEIDPNL----SEAW---YNRGLALYSLGR 380

Query: 465 FTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNP 514
           + +A    D   ++DP   D +Y +       G+YEEAL   D+ +   P
Sbjct: 381 YDEAAGCYDRVLEIDPENGDVWYDKALALGSLGRYEEALDCYDEALEAGP 430



 Score = 58.5 bits (140), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 86/476 (18%), Positives = 177/476 (37%), Gaps = 101/476 (21%)

Query: 87  EIESTSSNHTKALARLLRATVYIFTSQSTKAIEDLTQLVEDTSVDPKIKVNAHIKRAVVH 146
           EI+   SN    L  +L+        +  +A+E   +L+E   +DP +   A   R +  
Sbjct: 325 EIDPEYSNPWYNLGVVLQRL-----GRGEEALEAYDRLIE---IDPNLS-EAWYNRGLA- 374

Query: 147 LHAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDK---------- 196
           L++   + +A    D   ++DP   D +Y +       G+YEEAL   D+          
Sbjct: 375 LYSLGRYDEAAGCYDRVLEIDPENGDVWYDKALALGSLGRYEEALDCYDEALEAGPRRPE 434

Query: 197 ------------------------TIALNPNFHVARAQRHFVVHKMIVPGDRERVEQSLK 232
                                    I ++P +  A   R   ++ +       R E++  
Sbjct: 435 VLNNRCNILYSLERYNESVGCYGDVIGIDPGYENAWYNRGVALYTL------GRYEEASA 488

Query: 233 EFRNFVDTHSNVVEACTLFAQVLVDQEDFDGAEEYFNRSIRVDPENASLYVHRAMLMLQA 292
            +      + + V+A             +D A E ++ +I + P + +++ +R +L+  A
Sbjct: 489 SYGEAAALNGSRVDAWVGMGDAFAAAGIYDRAVEAYDGAIALYPGDPAVWYNRGLLLYNA 548

Query: 293 RGNVDEAIKLIEKAISIDKSCMFAYETLGTIEVQRGRLEEAVKCFNKALPLARDEAELSH 352
              ++EA++  ++ I ID S    +   G      GR +EA+ C+++AL           
Sbjct: 549 S-RLEEAVESFDEVIEIDPSYEGVWRLKGLALYALGRSDEAIDCYDEAL----------- 596

Query: 353 IYSLRDAAIAQMKVCERYNIKKKVSPRSQNITKNEKLAIKQLRENNDIIIRPADKGGKTV 412
                                 ++SP   ++  N  + +  L    + I    +   + +
Sbjct: 597 ----------------------EISPSEVSLWYNRGVVLFSLGRYGEAI----ESYDRVI 630

Query: 413 VMDKADYTQKMTSILNSND----YEIIPGDPTKTIEESEKYGNLENESGQKHAA-SDFTK 467
            +D+ +  + + S+   ++    YE       K +E S        + G  H    D+ +
Sbjct: 631 ELDRYEKGEALYSLGRYDEAIECYE-------KVLEVSPLEAKAWYQKGLAHQILGDYER 683

Query: 468 AFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNP-NFHVARAQ 522
           +    D   ++DP   +   +RG +    G Y+ AL + D  +  +P +   AR +
Sbjct: 684 SAECYDRVVEIDPGYEEVILRRGFVLLRLGDYDGALASYDLALQEDPDDLEAARGR 739



 Score = 55.1 bits (131), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 57/242 (23%), Positives = 107/242 (44%), Gaps = 37/242 (15%)

Query: 297 DEAIKLIEKAISIDKSCMFAYETLGTIEVQRGRLEEAVKCFNKALPLARDEAELSHIYSL 356
           D A+  + K++ ID +   A+   G I    GRL+EA+ CFN++L +   + +  HI+  
Sbjct: 42  DLALLYVNKSLDIDPAYPDAWSLKGYILSDLGRLDEALSCFNRSLEI---DPQDPHIWYS 98

Query: 357 RDAAIAQMKVCER----YNIKKKVSPRSQNITKNEKLAIKQLRENNDIIIRPADKGGKTV 412
           +   +  + + +     Y+   + +    ++ +   LA+  L    + + R  D+    +
Sbjct: 99  KGFVLYGLGIYDEAIDCYDRAMEFNSTGPDLWRARGLALYSLGRYEEAV-RSYDE---AI 154

Query: 413 VMDKAD---YTQKMTSILNSNDYEIIPGDPTKTIEESEKYGNLENESGQKHAASDFTKAF 469
           V D A    + QK  ++     YE       K IE  +    ++ +     AAS   KA 
Sbjct: 155 VFDPAQGDLWYQKGLALCGLGRYE-------KAIESYDFAITIDGDD----AASWHGKAL 203

Query: 470 A--DLDEAEK----------VDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFH 517
           A   L  AE+          +DP++ D +Y +G      G++EEA +  D  + ++P +H
Sbjct: 204 ALYSLGRAEEAIDCYDRAIDIDPSLTDVWYNKGIALYALGRHEEAFKCYDAAVEIDPLYH 263

Query: 518 VA 519
            A
Sbjct: 264 PA 265


>gi|425456094|ref|ZP_18835805.1| Tetratricopeptide repeat protein (fragment) [Microcystis aeruginosa
           PCC 9807]
 gi|389802896|emb|CCI18115.1| Tetratricopeptide repeat protein (fragment) [Microcystis aeruginosa
           PCC 9807]
          Length = 492

 Score = 89.4 bits (220), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 105/433 (24%), Positives = 192/433 (44%), Gaps = 48/433 (11%)

Query: 97  KALARLLRATVYIFTSQSTKAIEDLTQLVEDTSVDPKIKVNAHIKRAVVHLHAASDFTKA 156
           +AL  LLRA+ Y    +   A++D  + +E   ++P   + A+  RA+ H  +   +  A
Sbjct: 99  RALWYLLRASYYSSQQKYDLALDDHNKAIE---LNPNYAM-AYSVRAL-HYSSQQKYDLA 153

Query: 157 FADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQRHFVVH 216
             D ++A +++PN    Y  RG  Y L  +YE AL + +K I +NPN   A   R  +  
Sbjct: 154 LDDYNKAIELNPNYGLYYRGRGLNYLLQQKYELALADFNKAIDINPNNADAYNNRGNLYS 213

Query: 217 KMIVPGDRERVEQSLKEFRNFVDTHSNVVEACTLFAQVLVDQEDFDGAEEYFNRSIRVDP 276
                  +++ + +L +F   +D + N  +A      +   Q+ ++ A   +N++I ++P
Sbjct: 214 Y------QQKYDLALSDFNKAIDLNRNFAKAYENRGNLYRRQQKYELALADYNKAIDINP 267

Query: 277 ENASLYVHRAMLMLQARGNVDEAIKLIEKAISIDKSCMF-AYETLGTIEVQRGRLEEAVK 335
            +A  Y  R  L    +   + A+    KAI I+   +F AY   G    ++ + + A+ 
Sbjct: 268 NDAGAYASRGNLYSDLQ-KYELALADYNKAIDINSDDVFSAYFYRGIFYHRQQKYDLALA 326

Query: 336 CFNKALPLARDEAELSHIYSLRDAAIAQMKVCERYNIKKKVSPRSQNITKNEKLAIKQLR 395
             NKA+ L    +  SH Y +R   + + K  E+Y +   ++  S+ I  +   A  Q  
Sbjct: 327 DLNKAIEL---NSNFSHFYFVR-GILHENK--EKYEL--ALADYSKAIELDSNYA--QAY 376

Query: 396 ENNDIIIRPADKGGKTVVMDKADYTQKMTSILNSNDYEIIPGDPTKTIEESEKYGNLENE 455
            N   + R   K                        Y++   D +K I+ +  Y N    
Sbjct: 377 YNRGELYRLQKK------------------------YDLALADYSKAIDINPNYANAYYN 412

Query: 456 SG-QKHAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNP 514
            G   +    +  A +D  +A  ++PN AD+Y  RG +Y    +Y+ AL + ++ I +NP
Sbjct: 413 RGLLYYNQQKYDLALSDYSKAIDINPNYADAYNNRGVVYYNLQKYDLALADYNQAIRINP 472

Query: 515 NFHVARAQRHFVW 527
           N+  A   R  ++
Sbjct: 473 NYAQAYYNRGLLY 485



 Score = 79.7 bits (195), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 100/429 (23%), Positives = 194/429 (45%), Gaps = 28/429 (6%)

Query: 121 LTQLVEDTSVDPKIKVNAHIKRAVVHLHAASDFTKAFADLDEAEKVDPNVADSYYQRGQI 180
           LT + +  S+ P    +  IK +V  L +   + +  A +++A K+ P  A  Y  R   
Sbjct: 53  LTVINQAISLFPNSPKSYIIKWSV--LDSLERYDEGLAAINQAIKLAPR-ALWYLLRASY 109

Query: 181 YCLFGQYEEALRNLDKTIALNPNFHVARAQRHFVVHKMIVPGDRERVEQSLKEFRNFVDT 240
           Y    +Y+ AL + +K I LNPN+ +A + R   +H       +++ + +L ++   ++ 
Sbjct: 110 YSSQQKYDLALDDHNKAIELNPNYAMAYSVR--ALHY----SSQQKYDLALDDYNKAIEL 163

Query: 241 HSNVVEACTLFAQVLVDQEDFDGAEEYFNRSIRVDPENASLYVHRAMLMLQARGNVDEAI 300
           + N            + Q+ ++ A   FN++I ++P NA  Y +R  L    +   D A+
Sbjct: 164 NPNYGLYYRGRGLNYLLQQKYELALADFNKAIDINPNNADAYNNRGNLY-SYQQKYDLAL 222

Query: 301 KLIEKAISIDKSCMFAYETLGTIEVQRGRLEEAVKCFNKALPLARDEAELSHIYSLRDAA 360
               KAI ++++   AYE  G +  ++ + E A+  +NKA+ +  ++A     Y+ R   
Sbjct: 223 SDFNKAIDLNRNFAKAYENRGNLYRRQQKYELALADYNKAIDINPNDAG---AYASRGNL 279

Query: 361 IAQMKVCERYNIKKKVSPRSQNITKNEKLAIKQLR-------ENNDIIIRPADKGGKTVV 413
            + +   ++Y +      ++ +I  ++  +    R       +  D+ +  AD      +
Sbjct: 280 YSDL---QKYELALADYNKAIDINSDDVFSAYFYRGIFYHRQQKYDLAL--ADLNKAIEL 334

Query: 414 MDKADYTQKMTSILNSND--YEIIPGDPTKTIEESEKYGNLENESGQKH-AASDFTKAFA 470
                +   +  IL+ N   YE+   D +K IE    Y       G+ +     +  A A
Sbjct: 335 NSNFSHFYFVRGILHENKEKYELALADYSKAIELDSNYAQAYYNRGELYRLQKKYDLALA 394

Query: 471 DLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQRHFVWTST 530
           D  +A  ++PN A++YY RG +Y    +Y+ AL +  K I +NPN+  A   R  V+ + 
Sbjct: 395 DYSKAIDINPNYANAYYNRGLLYYNQQKYDLALSDYSKAIDINPNYADAYNNRGVVYYNL 454

Query: 531 LAELMAFSD 539
               +A +D
Sbjct: 455 QKYDLALAD 463



 Score = 78.2 bits (191), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 93/423 (21%), Positives = 174/423 (41%), Gaps = 70/423 (16%)

Query: 149 AASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPN--FHV 206
           A  ++ +A   +++A  + PN   SY  +  +     +Y+E L  +++ I L P   +++
Sbjct: 45  ARENYEQALTVINQAISLFPNSPKSYIIKWSVLDSLERYDEGLAAINQAIKLAPRALWYL 104

Query: 207 ARAQRHFVVHKMIVPGDRERVEQSLKEFRNFVDTHSNVVEACTLFAQVLVDQEDFDGAEE 266
            RA  +           +++ + +L +    ++ + N   A ++ A     Q+ +D A +
Sbjct: 105 LRASYY---------SSQQKYDLALDDHNKAIELNPNYAMAYSVRALHYSSQQKYDLALD 155

Query: 267 YFNRSIRVDPENASLYVHRAM-LMLQARGNVDEAIKLIEKAISIDKSCMFAYETLGTIEV 325
            +N++I ++P     Y  R +  +LQ +   + A+    KAI I+ +   AY   G +  
Sbjct: 156 DYNKAIELNPNYGLYYRGRGLNYLLQQK--YELALADFNKAIDINPNNADAYNNRGNLYS 213

Query: 326 QRGRLEEAVKCFNKALPLARDEAELSHIYSLRDAAIAQMKVCERYNIKKKVSPRSQNITK 385
            + + + A+  FNKA+ L R                         N  K    R     +
Sbjct: 214 YQQKYDLALSDFNKAIDLNR-------------------------NFAKAYENRGNLYRR 248

Query: 386 NEKLAIKQLRENNDIIIRPADKGG-----------KTVVMDKADYTQKMTSILNSND--- 431
            +K  +     N  I I P D G            +   +  ADY + +   +NS+D   
Sbjct: 249 QQKYELALADYNKAIDINPNDAGAYASRGNLYSDLQKYELALADYNKAID--INSDDVFS 306

Query: 432 --------------YEIIPGDPTKTIEESEKYGNLENESGQKHAASD-FTKAFADLDEAE 476
                         Y++   D  K IE +  + +     G  H   + +  A AD  +A 
Sbjct: 307 AYFYRGIFYHRQQKYDLALADLNKAIELNSNFSHFYFVRGILHENKEKYELALADYSKAI 366

Query: 477 KVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQRHFVWTSTLAELMA 536
           ++D N A +YY RG++Y L  +Y+ AL +  K I +NPN+  A   R  ++ +     +A
Sbjct: 367 ELDSNYAQAYYNRGELYRLQKKYDLALADYSKAIDINPNYANAYYNRGLLYYNQQKYDLA 426

Query: 537 FSD 539
            SD
Sbjct: 427 LSD 429



 Score = 52.8 bits (125), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 42/178 (23%), Positives = 85/178 (47%), Gaps = 20/178 (11%)

Query: 50  ELTNGDTNESHELDLLSKAKRAFEHEDYLTAIRH-CTEEIESTSSNHTKAL--------A 100
           +L   D N++ EL+        F H  ++  I H   E+ E   ++++KA+        A
Sbjct: 322 DLALADLNKAIELN------SNFSHFYFVRGILHENKEKYELALADYSKAIELDSNYAQA 375

Query: 101 RLLRATVYIFTSQSTKAIEDLTQLVEDTSVDPKIKVNAHIKRAVVHLHAASDFTKAFADL 160
              R  +Y    +   A+ D ++ ++   ++P    NA+  R +++ +    +  A +D 
Sbjct: 376 YYNRGELYRLQKKYDLALADYSKAID---INPNY-ANAYYNRGLLY-YNQQKYDLALSDY 430

Query: 161 DEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQRHFVVHKM 218
            +A  ++PN AD+Y  RG +Y    +Y+ AL + ++ I +NPN+  A   R  + + +
Sbjct: 431 SKAIDINPNYADAYNNRGVVYYNLQKYDLALADYNQAIRINPNYAQAYYNRGLLYYNL 488


>gi|254410505|ref|ZP_05024284.1| tetratricopeptide repeat domain protein [Coleofasciculus
           chthonoplastes PCC 7420]
 gi|196182711|gb|EDX77696.1| tetratricopeptide repeat domain protein [Coleofasciculus
           chthonoplastes PCC 7420]
          Length = 323

 Score = 89.4 bits (220), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 67/240 (27%), Positives = 115/240 (47%), Gaps = 30/240 (12%)

Query: 140 IKRAVVHLHAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIA 199
           ++R V  L A  DF  A  D ++A K+D N A +Y  RG  Y L G++++A+ +L++ I 
Sbjct: 72  VQRGVEKL-ATGDFRGAIDDFNQAIKIDHNSASAYSIRGHTYTLQGEFKKAITDLNRAIE 130

Query: 200 LNPNFHVARAQRHFVVHKM---------------IVPG-------------DRERVEQSL 231
           + PNF  A   R F   +M               I P               +E +++++
Sbjct: 131 IAPNFDPAYNNRGFARLQMGDLEGAISDFTKAIDINPNLALAYNGRGFAHLQQENIQEAI 190

Query: 232 KEFRNFVDTHSNVVEACTLFAQVLVDQEDFDGAEEYFNRSIRVDPENASLYVHRAMLMLQ 291
            +F   ++ + N+V A    A   ++Q  F  A   FNR+I V+P  A  Y +R  + LQ
Sbjct: 191 TDFNQALEINPNLVLAYNNRANARLEQGKFKEAIADFNRAIAVNPNYAQGYSNRGFVHLQ 250

Query: 292 ARGNVDEAIKLIEKAISIDKSCMFAYETLGTIEVQRGRLEEAVKCFNKALPLARDEAELS 351
            + ++  A+  + +A+ I+ +   AY   G   VQ    EEA+  F KA  L+R + +++
Sbjct: 251 -QNDLQTALADLNQALEINPNYAQAYYHRGLTHVQLSNEEEAIADFQKAADLSRQQGDMT 309



 Score = 64.7 bits (156), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 66/255 (25%), Positives = 107/255 (41%), Gaps = 38/255 (14%)

Query: 260 DFDGAEEYFNRSIRVDPENASLYVHRA-MLMLQARGNVDEAIKLIEKAISIDKSCMFAYE 318
           DF GA + FN++I++D  +AS Y  R     LQ  G   +AI  + +AI I  +   AY 
Sbjct: 83  DFRGAIDDFNQAIKIDHNSASAYSIRGHTYTLQ--GEFKKAITDLNRAIEIAPNFDPAYN 140

Query: 319 TLGTIEVQRGRLEEAVKCFNKALPLARDEAELSHIYSLRDAAIAQMKVCERYNIKKKVSP 378
             G   +Q G LE A+  F KA+ +      L+  Y+ R  A  Q +     NI++ ++ 
Sbjct: 141 NRGFARLQMGDLEGAISDFTKAIDI---NPNLALAYNGRGFAHLQQE-----NIQEAITD 192

Query: 379 RSQNITKNEKLAIKQLRENNDIIIRPADKGGKTVVMDKADYTQKMTSILNSNDYEIIPGD 438
            +Q +  N  L +                           Y  +  + L    ++    D
Sbjct: 193 FNQALEINPNLVLA--------------------------YNNRANARLEQGKFKEAIAD 226

Query: 439 PTKTIEESEKYGNLENESGQKH-AASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFG 497
             + I  +  Y    +  G  H   +D   A ADL++A +++PN A +YY RG  +    
Sbjct: 227 FNRAIAVNPNYAQGYSNRGFVHLQQNDLQTALADLNQALEINPNYAQAYYHRGLTHVQLS 286

Query: 498 QYEEALRNLDKTIAL 512
             EEA+ +  K   L
Sbjct: 287 NEEEAIADFQKAADL 301



 Score = 52.4 bits (124), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 26/69 (37%), Positives = 40/69 (57%)

Query: 458 QKHAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFH 517
           +K A  DF  A  D ++A K+D N A +Y  RG  Y L G++++A+ +L++ I + PNF 
Sbjct: 77  EKLATGDFRGAIDDFNQAIKIDHNSASAYSIRGHTYTLQGEFKKAITDLNRAIEIAPNFD 136

Query: 518 VARAQRHFV 526
            A   R F 
Sbjct: 137 PAYNNRGFA 145



 Score = 47.8 bits (112), Expect = 0.016,   Method: Compositional matrix adjust.
 Identities = 59/258 (22%), Positives = 105/258 (40%), Gaps = 34/258 (13%)

Query: 282 YVHRAMLMLQARGNVDEAIKLIEKAISIDKSCMFAYETLGTIEVQRGRLEEAVKCFNKAL 341
           +V R +  L A G+   AI    +AI ID +   AY   G     +G  ++A+   N+A+
Sbjct: 71  FVQRGVEKL-ATGDFRGAIDDFNQAIKIDHNSASAYSIRGHTYTLQGEFKKAITDLNRAI 129

Query: 342 PLARDEAELSHIYSLRDAAIAQMKVCERYNIKKKVSPRSQNITKNEKLAIKQLRENNDII 401
            +A +       Y+ R  A  QM      +++  +S  ++ I  N  LA+          
Sbjct: 130 EIAPN---FDPAYNNRGFARLQMG-----DLEGAISDFTKAIDINPNLALA--------- 172

Query: 402 IRPADKGGKTVVMDKADYTQKMTSILNSNDYEIIPGDPTKTIEESEKYGNLENESGQKHA 461
                  G+     + +  Q+  +  N    + +  +P   +  + +  N   E G+   
Sbjct: 173 -----YNGRGFAHLQQENIQEAITDFN----QALEINPNLVLAYNNR-ANARLEQGK--- 219

Query: 462 ASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARA 521
              F +A AD + A  V+PN A  Y  RG ++      + AL +L++ + +NPN+  A  
Sbjct: 220 ---FKEAIADFNRAIAVNPNYAQGYSNRGFVHLQQNDLQTALADLNQALEINPNYAQAYY 276

Query: 522 QRHFVWTSTLAELMAFSD 539
            R         E  A +D
Sbjct: 277 HRGLTHVQLSNEEEAIAD 294



 Score = 45.8 bits (107), Expect = 0.052,   Method: Compositional matrix adjust.
 Identities = 40/139 (28%), Positives = 62/139 (44%), Gaps = 11/139 (7%)

Query: 65  LSKAKRAFEH---EDYLTAIRHCTEEIESTSSNHTKALARLLRATVYIFTSQSTKAIEDL 121
           L+   R F H   E+   AI    + +E    N    LA   RA   +   +  +AI D 
Sbjct: 171 LAYNGRGFAHLQQENIQEAITDFNQALEI---NPNLVLAYNNRANARLEQGKFKEAIADF 227

Query: 122 TQLVEDTSVDPKIKVNAHIKRAVVHLHAASDFTKAFADLDEAEKVDPNVADSYYQRGQIY 181
            + +   +V+P      +  R  VHL   +D   A ADL++A +++PN A +YY RG  +
Sbjct: 228 NRAI---AVNPNY-AQGYSNRGFVHLQQ-NDLQTALADLNQALEINPNYAQAYYHRGLTH 282

Query: 182 CLFGQYEEALRNLDKTIAL 200
                 EEA+ +  K   L
Sbjct: 283 VQLSNEEEAIADFQKAADL 301


>gi|296127340|ref|YP_003634592.1| hypothetical protein [Brachyspira murdochii DSM 12563]
 gi|296019156|gb|ADG72393.1| TPR repeat-containing protein [Brachyspira murdochii DSM 12563]
          Length = 617

 Score = 89.4 bits (220), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 103/407 (25%), Positives = 178/407 (43%), Gaps = 53/407 (13%)

Query: 117 AIEDLTQLVEDTSVDPKIKVNAHIKRAVVHLHAASDFTKAFADLDEAEKVDPNVADSYYQ 176
           AI+D  +++E   +DP     A+  R     H    + +A  D D+A K++PN AD YY 
Sbjct: 246 AIKDFNKILE---LDPN-NYYAYGNRGNSK-HDLGLYKEAIKDYDKAIKINPNYADCYYN 300

Query: 177 RGQIYCLFGQYEEALRNLDKTIALNP---NFHVARAQRHFVVHKMIVPGDRERVEQSLKE 233
           R       G ++EA+++ D  I   P   N ++ R    +         D E  E+++K+
Sbjct: 301 RANSKKELGLFKEAIKDYDNAIKWKPKDINVYINRGNAKY---------DLELYEEAIKD 351

Query: 234 FRNFVDTHSNVVEACTLFAQVLVDQEDFDGAEEYFNRSIRVDPENASLYVHRAMLMLQAR 293
           +   +   SN  +A    A    +   ++ A + ++++I ++P  +  Y +R  L     
Sbjct: 352 YDKIIKLDSNYTDAYYNRANAKRELGLYNEAIKDYDKAIYLNPNYSEAYNNRG-LAKSGL 410

Query: 294 GNVDEAIKLIEKAISIDKSCMFAYETLGTIEVQRGRLEEAVKCFNKALPLARDEAELSHI 353
           G   EAIK  E++I +      AY  +G+ +   G L+E++K ++KA+       EL   
Sbjct: 411 GMYKEAIKDYEESIDLCADNPEAYYNIGSAKYDLGLLKESIKYYDKAI-------ELRPT 463

Query: 354 YSLRDAAIAQMKVCERYNIKKKVSPRSQNITKNEKLAIKQLRENNDIIIRPADKGGKTVV 413
           YS            E YN        ++ ++KN+    K+        I+  DK  +   
Sbjct: 464 YS------------EAYN--------NRGLSKNDLELYKE-------AIKDYDKSIELNP 496

Query: 414 MDKADYTQKMTSILNSNDYEIIPGDPTKTIEESEKY-GNLENESGQKHAASDFTKAFADL 472
            D   Y  +  +  +   Y+    D +K IE S  Y     N    K    ++ +A  D 
Sbjct: 497 NDSNTYNNRGLTKSSLGLYKEAIKDYSKAIELSPNYVYAYSNRGSAKDELGEYKEAIKDY 556

Query: 473 DEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVA 519
           D+A ++ PN+A  Y  RG +    G Y+EAL++  K + L PN   A
Sbjct: 557 DKAIELKPNMAYLYNDRGWVKKNAGLYKEALKDYKKALELEPNNEYA 603



 Score = 73.9 bits (180), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 98/410 (23%), Positives = 169/410 (41%), Gaps = 85/410 (20%)

Query: 117 AIEDLTQLVEDTSVDPKIKVNAHIKRAVV--HLHAASDFTKAFADLDEAEKVDPNVADSY 174
           AIED ++++E   +D K  ++A+  R V   +LH    F +A  D ++  ++DPN   +Y
Sbjct: 212 AIEDYSKVIE---LDHK-NIDAYNNRGVSKNYLHL---FDEAIKDFNKILELDPNNYYAY 264

Query: 175 YQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQRHFVVHKMIVPGDRERVEQSLKEF 234
             RG      G Y+EA+++ DK I +NPN+      R                       
Sbjct: 265 GNRGNSKHDLGLYKEAIKDYDKAIKINPNYADCYYNR----------------------- 301

Query: 235 RNFVDTHSNVVEACTLFAQVLVDQEDFDGAEEYFNRSIRVDPENASLYVHRAMLMLQARG 294
                  +N  +   LF + + D          ++ +I+  P++ ++Y++R         
Sbjct: 302 -------ANSKKELGLFKEAIKD----------YDNAIKWKPKDINVYINRGNAKYDLEL 344

Query: 295 NVDEAIKLIEKAISIDKSCMFAYETLGTIEVQRGRLEEAVKCFNKALPLARDEAELSHIY 354
             +EAIK  +K I +D +   AY      + + G   EA+K ++KA+ L       S  Y
Sbjct: 345 -YEEAIKDYDKIIKLDSNYTDAYYNRANAKRELGLYNEAIKDYDKAIYL---NPNYSEAY 400

Query: 355 SLRDAAIAQMKVCERYNIKKKVSPRSQNITKNEKLAIKQLRENNDIIIRPADKGGKTVVM 414
           + R  A + + +                     K AIK   E+ D+    AD       +
Sbjct: 401 NNRGLAKSGLGMY--------------------KEAIKDYEESIDLC---ADNPEAYYNI 437

Query: 415 DKADYTQKMTSILNSNDYEIIPGDPTKTIEESEKYGNLENESG-QKHAASDFTKAFADLD 473
             A Y   +         E I     K IE    Y    N  G  K+    + +A  D D
Sbjct: 438 GSAKYDLGLLK-------ESIKY-YDKAIELRPTYSEAYNNRGLSKNDLELYKEAIKDYD 489

Query: 474 EAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQR 523
           ++ +++PN +++Y  RG      G Y+EA+++  K I L+PN+  A + R
Sbjct: 490 KSIELNPNDSNTYNNRGLTKSSLGLYKEAIKDYSKAIELSPNYVYAYSNR 539



 Score = 73.2 bits (178), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 70/287 (24%), Positives = 127/287 (44%), Gaps = 42/287 (14%)

Query: 105 ATVYIFTSQSTKAIEDLTQLVEDTSVDPKIK---VNAHIKRAVVHLHAASD---FTKAFA 158
           A  Y   + S K +    + ++D     K K   +N +I R     +A  D   + +A  
Sbjct: 295 ADCYYNRANSKKELGLFKEAIKDYDNAIKWKPKDINVYINRG----NAKYDLELYEEAIK 350

Query: 159 DLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQRHFV---- 214
           D D+  K+D N  D+YY R       G Y EA+++ DK I LNPN+  A   R       
Sbjct: 351 DYDKIIKLDSNYTDAYYNRANAKRELGLYNEAIKDYDKAIYLNPNYSEAYNNRGLAKSGL 410

Query: 215 -VHKMIVPGDRERVE-----------------------QSLKEFRNFVDTHSNVVEACTL 250
            ++K  +    E ++                       +S+K +   ++      EA   
Sbjct: 411 GMYKEAIKDYEESIDLCADNPEAYYNIGSAKYDLGLLKESIKYYDKAIELRPTYSEAYNN 470

Query: 251 FAQVLVDQEDFDGAEEYFNRSIRVDPENASLYVHRAMLMLQARGNVDEAIKLIEKAISID 310
                 D E +  A + +++SI ++P +++ Y +R  L   + G   EAIK   KAI + 
Sbjct: 471 RGLSKNDLELYKEAIKDYDKSIELNPNDSNTYNNRG-LTKSSLGLYKEAIKDYSKAIELS 529

Query: 311 KSCMFAYETLGTIEVQRGRLEEAVKCFNKALPLARDEAELSHIYSLR 357
            + ++AY   G+ + + G  +EA+K ++KA+ L   +  ++++Y+ R
Sbjct: 530 PNYVYAYSNRGSAKDELGEYKEAIKDYDKAIEL---KPNMAYLYNDR 573



 Score = 56.2 bits (134), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 85/372 (22%), Positives = 154/372 (41%), Gaps = 79/372 (21%)

Query: 143 AVVHLHAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNP 202
            VV  +  S + KA    ++A  + PN A +YY RG      G +++A+++ DK I L+ 
Sbjct: 132 GVVDNNTGS-YEKAIEYYNKAIDLIPNYALAYYNRGLARNNLGFFKKAIKDYDKAIELSK 190

Query: 203 NFHVARAQRHFVVHKMIVPGDRERVEQSLKEFRNFVDTHSNVVEACTLFAQVL-VDQEDF 261
           N+  A   R                       +N  + H   +E    +++V+ +D ++ 
Sbjct: 191 NYKDAYYNRGLA--------------------KNNANLHKEAIED---YSKVIELDHKNI 227

Query: 262 DGAEEYFNRSIRVDPENASLYVHRAMLMLQARGNVDEAIKLIEKAISIDKSCMFAYETLG 321
           D    Y NR +  +      Y+H            DEAIK   K + +D +  +AY   G
Sbjct: 228 DA---YNNRGVSKN------YLHL----------FDEAIKDFNKILELDPNNYYAYGNRG 268

Query: 322 TIEVQRGRLEEAVKCFNKALPLARDEAELSHIYSLRDAAIAQMKVCERYNIKKKVSPRSQ 381
             +   G  +EA+K ++KA+ +  + A+  +                R N KK++    +
Sbjct: 269 NSKHDLGLYKEAIKDYDKAIKINPNYADCYY---------------NRANSKKELGLFKE 313

Query: 382 NITKNEKLAIKQLRENNDIIIRPADKGGKTVVMDKADYTQKMTSILNSNDYEIIPGDPTK 441
                   AIK    +N I  +P D     V +++ +    +        YE    D  K
Sbjct: 314 --------AIKDY--DNAIKWKPKD---INVYINRGNAKYDLEL------YEEAIKDYDK 354

Query: 442 TIEESEKYGN-LENESGQKHAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYE 500
            I+    Y +   N +  K     + +A  D D+A  ++PN +++Y  RG      G Y+
Sbjct: 355 IIKLDSNYTDAYYNRANAKRELGLYNEAIKDYDKAIYLNPNYSEAYNNRGLAKSGLGMYK 414

Query: 501 EALRNLDKTIAL 512
           EA+++ +++I L
Sbjct: 415 EAIKDYEESIDL 426



 Score = 55.8 bits (133), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 85/373 (22%), Positives = 141/373 (37%), Gaps = 88/373 (23%)

Query: 161 DEAEKVDPN---VADSYYQ---RGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQRHFV 214
           DE +K+D N   + D Y+     G +    G YE+A+   +K I L PN+ +A   R   
Sbjct: 109 DENDKIDVNDLHILDEYFDYNTNGVVDNNTGSYEKAIEYYNKAIDLIPNYALAYYNRGLA 168

Query: 215 VHKMIVPGDRERVEQSLKEFRNFVDTHSNVVEACTLFAQVLVDQEDFDGAEEYFNRSIRV 274
            + +         ++++K++   ++   N  +A                   Y+NR +  
Sbjct: 169 RNNLGF------FKKAIKDYDKAIELSKNYKDA-------------------YYNRGLA- 202

Query: 275 DPENASLYVHRAMLMLQARGNVDEAIKLIEKAISIDKSCMFAYETLGTIEVQRGRLEEAV 334
              NA+L  H+            EAI+   K I +D   + AY   G  +      +EA+
Sbjct: 203 -KNNANL--HK------------EAIEDYSKVIELDHKNIDAYNNRGVSKNYLHLFDEAI 247

Query: 335 KCFNKALPLARDEAELSHIYSLRDAAIAQMKVCER----YNIKKKVSPRSQNITKNEKLA 390
           K FNK L L   +    + Y  R  +   + + +     Y+   K++P   +   N   +
Sbjct: 248 KDFNKILEL---DPNNYYAYGNRGNSKHDLGLYKEAIKDYDKAIKINPNYADCYYNRANS 304

Query: 391 IKQLRENNDIIIRPADKGGKTVVMDKADYTQKMTSILNSNDYEIIPGDPTKTIEESEKYG 450
            K+L      + + A K     +  K                   P D    I       
Sbjct: 305 KKELG-----LFKEAIKDYDNAIKWK-------------------PKDINVYI------- 333

Query: 451 NLENESGQKHAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTI 510
              N    K+    + +A  D D+  K+D N  D+YY R       G Y EA+++ DK I
Sbjct: 334 ---NRGNAKYDLELYEEAIKDYDKIIKLDSNYTDAYYNRANAKRELGLYNEAIKDYDKAI 390

Query: 511 ALNPNFHVARAQR 523
            LNPN+  A   R
Sbjct: 391 YLNPNYSEAYNNR 403



 Score = 48.1 bits (113), Expect = 0.013,   Method: Compositional matrix adjust.
 Identities = 52/219 (23%), Positives = 94/219 (42%), Gaps = 12/219 (5%)

Query: 315 FAYETLGTIEVQRGRLEEAVKCFNKALPLARDEAELSHIYSL-RDAAIAQMKVCERYNIK 373
           F Y T G ++   G  E+A++ +NKA+ L  + A   +   L R+      K  + Y+  
Sbjct: 126 FDYNTNGVVDNNTGSYEKAIEYYNKAIDLIPNYALAYYNRGLARNNLGFFKKAIKDYDKA 185

Query: 374 KKVSPRSQNITKNEKLAIKQLRENNDIIIRPADKGGKTVVMDKAD---YTQKMTSILNSN 430
            ++S   ++   N  LA    + N ++     +   K + +D  +   Y  +  S    +
Sbjct: 186 IELSKNYKDAYYNRGLA----KNNANLHKEAIEDYSKVIELDHKNIDAYNNRGVSKNYLH 241

Query: 431 DYEIIPGDPTKTIE-ESEKYGNLENESGQKHAASDFTKAFADLDEAEKVDPNVADSYYQR 489
            ++    D  K +E +   Y    N    KH    + +A  D D+A K++PN AD YY R
Sbjct: 242 LFDEAIKDFNKILELDPNNYYAYGNRGNSKHDLGLYKEAIKDYDKAIKINPNYADCYYNR 301

Query: 490 GQIYCLFGQYEEALRNLDKTIALNP---NFHVARAQRHF 525
                  G ++EA+++ D  I   P   N ++ R    +
Sbjct: 302 ANSKKELGLFKEAIKDYDNAIKWKPKDINVYINRGNAKY 340



 Score = 47.0 bits (110), Expect = 0.026,   Method: Compositional matrix adjust.
 Identities = 38/168 (22%), Positives = 82/168 (48%), Gaps = 7/168 (4%)

Query: 161 DEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQRHFVVHKMIV 220
           D+A ++ P  +++Y  RG        Y+EA+++ DK+I LNPN       R      + +
Sbjct: 455 DKAIELRPTYSEAYNNRGLSKNDLELYKEAIKDYDKSIELNPNDSNTYNNRGLTKSSLGL 514

Query: 221 PGDRERVEQSLKEFRNFVDTHSNVVEACTLFAQVLVDQEDFDGAEEYFNRSIRVDPENAS 280
                  ++++K++   ++   N V A +       +  ++  A + ++++I + P  A 
Sbjct: 515 ------YKEAIKDYSKAIELSPNYVYAYSNRGSAKDELGEYKEAIKDYDKAIELKPNMAY 568

Query: 281 LYVHRAMLMLQARGNVDEAIKLIEKAISIDKSCMFAYETLGTIEVQRG 328
           LY  R  +   A G   EA+K  +KA+ ++ +  +A E + +++ + G
Sbjct: 569 LYNDRGWVKKNA-GLYKEALKDYKKALELEPNNEYAIENMKSLKKEYG 615


>gi|268324093|emb|CBH37681.1| hypothetical protein, containing TPR repeats [uncultured archaeon]
 gi|268326410|emb|CBH39998.1| hypothetical membrane protein, containing TPR repeats [uncultured
           archaeon]
          Length = 739

 Score = 89.0 bits (219), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 96/421 (22%), Positives = 174/421 (41%), Gaps = 29/421 (6%)

Query: 105 ATVYIFTSQSTKAIEDLTQLVEDTSVDPKIKVNAHIKRAVVHLHAASDFTKAFADLDEAE 164
           A+ Y F S   K+++ L + VE   +DP+     + K  V+     ++  +A A  D+A 
Sbjct: 268 ASCYYFNSNLNKSLQYLDKAVE---IDPQYAQIWNNKGIVLGKLGRNE--EAIAAYDKAI 322

Query: 165 KVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQRHFVVHKMIVPGDR 224
           +++   A ++  +G      G+YEEA+   +K I + P    A   +   +       D 
Sbjct: 323 EINSQYAKAWNNKGATLGKLGKYEEAIAAFNKAIEIKPQCAEAWNNKGAALR------DL 376

Query: 225 ERVEQSLKEFRNFVDTHSNVVEACTLFAQVLVDQEDFDGAEEYFNRSIRVDPENASLYVH 284
            R E+++      ++ +S    A       L D    + A   ++++I ++P+ A  + +
Sbjct: 377 GRYEEAIAAHDKAIEINSQYARAWNNKGVALCDLGRNEEAIAAYDKAIEINPQFAGAWNN 436

Query: 285 RAMLMLQARGNVDEAIKLIEKAISIDKSCMFAYETLGTIEVQRGRLEEAVKCFNKALPLA 344
           +    L   G  +EAI   +KAI I+     A+   G    + GR EEA+   +KA+   
Sbjct: 437 KGA-ALGKLGRYEEAIAACDKAIEINPQFAEAWNNKGAALGKLGRYEEAIAACDKAIETN 495

Query: 345 RDEAE--------LSHIYSLRDAAIAQMKVCERYNIKKKVSPRSQNITKNEKLAIKQLRE 396
              AE        LS +    +A  A  K  E       ++ +      N+ +A+  L  
Sbjct: 496 PQYAEAWNNKGLALSGLGKYEEAIAAHDKAIE-------INSQYAGAWTNKGIALCHLGR 548

Query: 397 NNDIIIRPADKGGKTVVMDKADYTQKMTSILNSNDYEIIPGDPTKTIEESEKYGNLENES 456
             + I    D   +    D   +  K  ++     YE       K IE + +Y    N  
Sbjct: 549 YEEAI-AACDNAIEINPRDAEAWNNKGVALSGLGKYEEAIAAHDKAIEINSQYAGAWNNK 607

Query: 457 GQK-HAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPN 515
           G        + +A A  DEA +++P  A+++  +G   C  G+YE A+   D  I +NP 
Sbjct: 608 GVALRGLGRYEEAIAAYDEAVEINPQYAEAWNNKGIALCHLGKYEGAIAAYDNAIEINPQ 667

Query: 516 F 516
           +
Sbjct: 668 Y 668



 Score = 77.8 bits (190), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 91/421 (21%), Positives = 168/421 (39%), Gaps = 30/421 (7%)

Query: 128 TSVDPKIKVNAHIKRAV----VHLHAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCL 183
            + D  I++N+   +A       L     + +A A  ++A ++ P  A+++  +G     
Sbjct: 316 AAYDKAIEINSQYAKAWNNKGATLGKLGKYEEAIAAFNKAIEIKPQCAEAWNNKGAALRD 375

Query: 184 FGQYEEALRNLDKTIALNPNFHVARAQRHFVVHKMIVPGDRERVEQSLKEFRNFVDTHSN 243
            G+YEEA+   DK I +N  +  ARA  +    K +   D  R E+++  +   ++ +  
Sbjct: 376 LGRYEEAIAAHDKAIEINSQY--ARAWNN----KGVALCDLGRNEEAIAAYDKAIEINPQ 429

Query: 244 VVEACTLFAQVLVDQEDFDGAEEYFNRSIRVDPENASLYVHRAMLMLQARGNVDEAIKLI 303
              A       L     ++ A    +++I ++P+ A  + ++    L   G  +EAI   
Sbjct: 430 FAGAWNNKGAALGKLGRYEEAIAACDKAIEINPQFAEAWNNKGA-ALGKLGRYEEAIAAC 488

Query: 304 EKAISIDKSCMFAYETLGTIEVQRGRLEEAVKCFNKALPLARDEA--------ELSHIYS 355
           +KAI  +     A+   G      G+ EEA+   +KA+ +    A         L H+  
Sbjct: 489 DKAIETNPQYAEAWNNKGLALSGLGKYEEAIAAHDKAIEINSQYAGAWTNKGIALCHLGR 548

Query: 356 LRDAAIAQMKVCERYNIKKKVSPRSQNITKNEKLAIKQLRENNDIIIRPADKGGKTVVMD 415
             +A  A     E       ++PR      N+ +A+  L +  + I    DK  +     
Sbjct: 549 YEEAIAACDNAIE-------INPRDAEAWNNKGVALSGLGKYEEAI-AAHDKAIEINSQY 600

Query: 416 KADYTQKMTSILNSNDYEIIPGDPTKTIEESEKYGNLENESGQKHA-ASDFTKAFADLDE 474
              +  K  ++     YE       + +E + +Y    N  G        +  A A  D 
Sbjct: 601 AGAWNNKGVALRGLGRYEEAIAAYDEAVEINPQYAEAWNNKGIALCHLGKYEGAIAAYDN 660

Query: 475 AEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQRHFV--WTSTLA 532
           A +++P  AD++  +G      G+YEEA+   D  I +NP    A   +  V  W+    
Sbjct: 661 AIEINPQYADAWTNKGVALSDLGRYEEAIAAYDNAIEINPQLAEAWNNKGVVLGWSGRYE 720

Query: 533 E 533
           E
Sbjct: 721 E 721



 Score = 75.9 bits (185), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 83/377 (22%), Positives = 158/377 (41%), Gaps = 28/377 (7%)

Query: 153 FTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQRH 212
           + +A A  D+A +++   A ++  +G   C  G+ EEA+   DK I +NP F  A   + 
Sbjct: 379 YEEAIAAHDKAIEINSQYARAWNNKGVALCDLGRNEEAIAAYDKAIEINPQFAGAWNNKG 438

Query: 213 FVVHKMIVPGDRERVEQSLKEFRNFVDTHSNVVEACTLFAQVLVDQEDFDGAEEYFNRSI 272
             + K+       R E+++      ++ +    EA       L     ++ A    +++I
Sbjct: 439 AALGKL------GRYEEAIAACDKAIEINPQFAEAWNNKGAALGKLGRYEEAIAACDKAI 492

Query: 273 RVDPENASLYVHRAMLMLQARGNVDEAIKLIEKAISIDKSCMFAYETLGTIEVQRGRLEE 332
             +P+ A  + ++  L L   G  +EAI   +KAI I+     A+   G      GR EE
Sbjct: 493 ETNPQYAEAWNNKG-LALSGLGKYEEAIAAHDKAIEINSQYAGAWTNKGIALCHLGRYEE 551

Query: 333 AVKCFNKALPLARDEAE--------LSHIYSLRDAAIAQMKVCERYNIKKKVSPRSQNIT 384
           A+   + A+ +   +AE        LS +    +A  A  K  E       ++ +     
Sbjct: 552 AIAACDNAIEINPRDAEAWNNKGVALSGLGKYEEAIAAHDKAIE-------INSQYAGAW 604

Query: 385 KNEKLAIKQLRENNDIIIRPADKGGKTVVMDKADYTQKMTSILNSNDYEIIPGDPTKTIE 444
            N+ +A++ L    + I    D+  +        +  K  ++ +   YE         IE
Sbjct: 605 NNKGVALRGLGRYEEAI-AAYDEAVEINPQYAEAWNNKGIALCHLGKYEGAIAAYDNAIE 663

Query: 445 ESEKYGNLENESGQKHAASD---FTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEE 501
            + +Y +     G   A SD   + +A A  D A +++P +A+++  +G +    G+YEE
Sbjct: 664 INPQYADAWTNKGV--ALSDLGRYEEAIAAYDNAIEINPQLAEAWNNKGVVLGWSGRYEE 721

Query: 502 ALRNLDKTIALNPNFHV 518
           A    +K   ++P   +
Sbjct: 722 AKEAFEKAHEIDPTIEI 738



 Score = 59.3 bits (142), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 38/150 (25%), Positives = 70/150 (46%), Gaps = 10/150 (6%)

Query: 131 DPKIKVNAHIKRAV----VHLHAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQ 186
           D  I++N+    A     V L     + +A A  DEA +++P  A+++  +G   C  G+
Sbjct: 591 DKAIEINSQYAGAWNNKGVALRGLGRYEEAIAAYDEAVEINPQYAEAWNNKGIALCHLGK 650

Query: 187 YEEALRNLDKTIALNPNFHVARAQRHFVVHKMIVPGDRERVEQSLKEFRNFVDTHSNVVE 246
           YE A+   D  I +NP +  A        +K +   D  R E+++  + N ++ +  + E
Sbjct: 651 YEGAIAAYDNAIEINPQYADAW------TNKGVALSDLGRYEEAIAAYDNAIEINPQLAE 704

Query: 247 ACTLFAQVLVDQEDFDGAEEYFNRSIRVDP 276
           A      VL     ++ A+E F ++  +DP
Sbjct: 705 AWNNKGVVLGWSGRYEEAKEAFEKAHEIDP 734


>gi|113475191|ref|YP_721252.1| glycosyl transferase family protein [Trichodesmium erythraeum
           IMS101]
 gi|110166239|gb|ABG50779.1| glycosyl transferase, family 2 [Trichodesmium erythraeum IMS101]
          Length = 1737

 Score = 89.0 bits (219), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 80/367 (21%), Positives = 160/367 (43%), Gaps = 20/367 (5%)

Query: 155 KAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQRHFV 214
           +A A   +A K++PN ++ Y   G      G   EA+ N  K I+L P   +A       
Sbjct: 98  QAIASYSQAIKINPNFSELYISLGSALVQKGLLYEAIANFQKAISLEPESSIAHQNLGVA 157

Query: 215 VHKMIVPGDRERVEQSLKEFRNFVDTHSNVVEACTLFAQVLVDQEDFDGAEEYFNRSIRV 274
           + K      + ++E+ +  +R  ++      E        L  Q +F  A + + ++ ++
Sbjct: 158 LEK------QGQIEEGIICYRKAIEIDPGFWEGYQKLGIALTKQGEFHQAAKIYLKACQI 211

Query: 275 DPENASLYVHRAMLMLQARGNVDEAIKLIEKAISIDKSCMFAYETLGTIEVQRGRLEEAV 334
            P +A++Y H    + + R   DEAI    +AI ++ +    Y   G +  Q+ + EEA+
Sbjct: 212 IPNSATVYHHYGETLAKLR-RWDEAIAAYRQAIKLEANSPVIYHQFGYVLTQKQQWEEAI 270

Query: 335 KCFNKALPLARDEAELSHIYSLRDAAIAQMKVCERYNIKKKVS---PRSQNITKNEKLAI 391
             + +A+ +  +  ++ H   L DA   Q    E     +KV+   P S  +      A+
Sbjct: 271 SAYRQAIKIKPNSPDVYH--HLGDALTQQQNWEEAVGAYRKVTELQPNSPEVYHYFGYAL 328

Query: 392 KQLRENNDIIIRPADKGGKTVVMDKADYTQKMTSI---LNSNDYEIIPGDPTKTIEESEK 448
            QL++  + I+  A +    +  +  D   ++      L  ND+ ++  +  + +E +  
Sbjct: 329 SQLQQWEEAIV--AYRKASELQPNSPDVHHQLGHALIELKQNDWAVV--ELRQAVELNPN 384

Query: 449 YGNLENESGQKHA-ASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLD 507
                 + G+  +    + +A A    A +++PN+A+ Y   G+ Y    Q++EA+ N  
Sbjct: 385 LAEAYRDLGRALSNIKQWDEAIASFQGAIELNPNLAEVYGYLGKAYASQKQWDEAIVNYG 444

Query: 508 KTIALNP 514
             + LNP
Sbjct: 445 HALKLNP 451



 Score = 68.6 bits (166), Expect = 9e-09,   Method: Compositional matrix adjust.
 Identities = 83/360 (23%), Positives = 152/360 (42%), Gaps = 42/360 (11%)

Query: 174 YYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQRHFVVHKMIVPGDRERVEQSLKE 233
           Y+Q+GQ     GQ E+A+    KTI LNPN  + +     V+ K+       + E++   
Sbjct: 15  YFQQGQQAVAAGQLEKAVTLYKKTIELNPNLALYQQNLGDVLAKI------GKWEEAATV 68

Query: 234 FRNFVDTHSNVVEACTLFAQVLVDQEDFDGAEEYFNRSIRVDPENASLYVHRAMLMLQAR 293
           ++  ++       +      V   Q   + A   ++++I+++P  + LY+     ++Q +
Sbjct: 69  YQKAIELKPTSALSHYNLGNVQEKQGQLEQAIASYSQAIKINPNFSELYISLGSALVQ-K 127

Query: 294 GNVDEAIKLIEKAISIDKSCMFAYETLGTIEVQRGRLEEAVKCFNKALPLARDEAE---- 349
           G + EAI   +KAIS++     A++ LG    ++G++EE + C+ KA+ +     E    
Sbjct: 128 GLLYEAIANFQKAISLEPESSIAHQNLGVALEKQGQIEEGIICYRKAIEIDPGFWEGYQK 187

Query: 350 ----LSHIYSLRDAAIAQMKVCERYNIKKKVSPRSQNITKNEKLAIKQLRENNDII--IR 403
               L+       AA   +K C+       + P S  +  +    + +LR  ++ I   R
Sbjct: 188 LGIALTKQGEFHQAAKIYLKACQ-------IIPNSATVYHHYGETLAKLRRWDEAIAAYR 240

Query: 404 PADK--GGKTVVMDKADY--TQKMTSILNSNDY----EIIPGDPTKTIEESEKYGNLENE 455
            A K      V+  +  Y  TQK       + Y    +I P  P       + Y +L + 
Sbjct: 241 QAIKLEANSPVIYHQFGYVLTQKQQWEEAISAYRQAIKIKPNSP-------DVYHHLGDA 293

Query: 456 SGQKHAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPN 515
             Q+    +   A+  + E   + PN  + Y+  G       Q+EEA+    K   L PN
Sbjct: 294 LTQQQNWEEAVGAYRKVTE---LQPNSPEVYHYFGYALSQLQQWEEAIVAYRKASELQPN 350



 Score = 55.5 bits (132), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 54/260 (20%), Positives = 114/260 (43%), Gaps = 36/260 (13%)

Query: 113 QSTKAIEDLTQLVEDTSVDPKI-KVNAHIKRAVVHLHAASDFTKAFADLDEAEKVDPNVA 171
           Q+  A+ +L Q VE   ++P + +    + RA+ ++     + +A A    A +++PN+A
Sbjct: 367 QNDWAVVELRQAVE---LNPNLAEAYRDLGRALSNI---KQWDEAIASFQGAIELNPNLA 420

Query: 172 DSYYQRGQIYCLFGQYEEALRNLDKTIALNP-------NFHVARAQRHFVVHKMIVPGDR 224
           + Y   G+ Y    Q++EA+ N    + LNP       N  +   Q+      ++  G  
Sbjct: 421 EVYGYLGKAYASQKQWDEAIVNYGHALKLNPKLPEVHHNLALTLVQQQKFDDAIVSYGQA 480

Query: 225 ---------------------ERVEQSLKEFRNFVDTHSNVVEACTLFAQVLVDQEDFDG 263
                                +R ++++  +R   + + N      +  + L   E +D 
Sbjct: 481 IELGINTAEIHHQLGHTLSKLKRWDEAVISYRQAAEINPNSAAVYHVLGESLAQLEKWDE 540

Query: 264 AEEYFNRSIRVDPENASLYVHRAMLMLQARGNVDEAIKLIEKAISIDKSCMFAYETLGTI 323
           A   + ++ ++ P++A +  H   +M +  G  DEA++   KA+ +  S    +  LG  
Sbjct: 541 AVAAYTKASQLHPKSADVRYHIGEVMSRL-GRWDEAVEAYGKAVELRPSSAKFHFQLGEA 599

Query: 324 EVQRGRLEEAVKCFNKALPL 343
           + ++  L EA+ C+ +AL +
Sbjct: 600 KTKKNPLTEAISCYRRALEI 619



 Score = 54.3 bits (129), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 46/197 (23%), Positives = 92/197 (46%), Gaps = 7/197 (3%)

Query: 156 AFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQRHFVV 215
           A  +L +A +++PN+A++Y   G+      Q++EA+ +    I LNPN     A+ +  +
Sbjct: 371 AVVELRQAVELNPNLAEAYRDLGRALSNIKQWDEAIASFQGAIELNPNL----AEVYGYL 426

Query: 216 HKMIVPGDRERVEQSLKEFRNFVDTHSNVVEACTLFAQVLVDQEDFDGAEEYFNRSIRVD 275
            K      +++ ++++  + + +  +  + E     A  LV Q+ FD A   + ++I + 
Sbjct: 427 GKAY--ASQKQWDEAIVNYGHALKLNPKLPEVHHNLALTLVQQQKFDDAIVSYGQAIELG 484

Query: 276 PENASLYVHRAMLMLQARGNVDEAIKLIEKAISIDKSCMFAYETLGTIEVQRGRLEEAVK 335
              A ++ H+    L      DEA+    +A  I+ +    Y  LG    Q  + +EAV 
Sbjct: 485 INTAEIH-HQLGHTLSKLKRWDEAVISYRQAAEINPNSAAVYHVLGESLAQLEKWDEAVA 543

Query: 336 CFNKALPLARDEAELSH 352
            + KA  L    A++ +
Sbjct: 544 AYTKASQLHPKSADVRY 560



 Score = 49.3 bits (116), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 81/432 (18%), Positives = 167/432 (38%), Gaps = 78/432 (18%)

Query: 145 VHLHAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNF 204
           + L    +F +A     +A ++ PN A  Y+  G+      +++EA+    + I L  N 
Sbjct: 190 IALTKQGEFHQAAKIYLKACQIIPNSATVYHHYGETLAKLRRWDEAIAAYRQAIKLEANS 249

Query: 205 HVARAQRHFVVHK---------------MIVP---------GD----RERVEQSLKEFRN 236
            V   Q  +V+ +                I P         GD    ++  E+++  +R 
Sbjct: 250 PVIYHQFGYVLTQKQQWEEAISAYRQAIKIKPNSPDVYHHLGDALTQQQNWEEAVGAYRK 309

Query: 237 FVDTHSNVVEACTLFAQVLVDQEDFDGAEEYFNRSIRVDPENASLYVHRAMLMLQARGNV 296
             +   N  E    F   L   + ++ A   + ++  + P +  ++      +++ + N 
Sbjct: 310 VTELQPNSPEVYHYFGYALSQLQQWEEAIVAYRKASELQPNSPDVHHQLGHALIELKQN- 368

Query: 297 DEAIKLIEKAISIDKSCMFAYETLGTIEVQRGRLEEAVKCFNKALPLARDEAELSHIYSL 356
           D A+  + +A+ ++ +   AY  LG       + +EA+  F  A+ L  + AE   +Y  
Sbjct: 369 DWAVVELRQAVELNPNLAEAYRDLGRALSNIKQWDEAIASFQGAIELNPNLAE---VYGY 425

Query: 357 RDAAIAQMKVCER----YNIKKKVSPRSQNITKNEKLAIKQLRENNDIIIRPAD------ 406
              A A  K  +     Y    K++P+   +  N  L + Q ++ +D I+          
Sbjct: 426 LGKAYASQKQWDEAIVNYGHALKLNPKLPEVHHNLALTLVQQQKFDDAIVSYGQAIELGI 485

Query: 407 -------KGGKTVV----MDKADYTQKMTSILNSNDYEI--IPGDPTKTIEESEKYGNLE 453
                  + G T+      D+A  + +  + +N N   +  + G+    +E+        
Sbjct: 486 NTAEIHHQLGHTLSKLKRWDEAVISYRQAAEINPNSAAVYHVLGESLAQLEK-------- 537

Query: 454 NESGQKHAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALN 513
                      + +A A   +A ++ P  AD  Y  G++    G+++EA+    K + L 
Sbjct: 538 -----------WDEAVAAYTKASQLHPKSADVRYHIGEVMSRLGRWDEAVEAYGKAVELR 586

Query: 514 PNFHVARAQRHF 525
           P    + A+ HF
Sbjct: 587 P----SSAKFHF 594


>gi|282897129|ref|ZP_06305131.1| TPR repeat protein [Raphidiopsis brookii D9]
 gi|281197781|gb|EFA72675.1| TPR repeat protein [Raphidiopsis brookii D9]
          Length = 1279

 Score = 89.0 bits (219), Expect = 7e-15,   Method: Compositional matrix adjust.
 Identities = 102/467 (21%), Positives = 183/467 (39%), Gaps = 67/467 (14%)

Query: 94  NHTKALARLLRATVYIFTSQSTKAIEDLTQLVEDTSVDPKIKVNAHIKRAVVHLHAASDF 153
           N   ALA   R   +       KAIED  Q +   S       +A+ KR +   +   D 
Sbjct: 269 NPNLALAAYSRGVAHRDMGYLQKAIEDFNQTLHLNSA----FFDAYTKRGLAR-YDLGDK 323

Query: 154 TKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQRHF 213
             A  D ++   ++P+ AD Y  RG +YC    Y+EA+ + ++TI +NPN+  A   R  
Sbjct: 324 QGAIDDFNQVITINPHFADGYAARGLVYCDLRNYQEAINDFNQTIRINPNYAQAYHNRGV 383

Query: 214 VVHKMIVPGDRERVEQSLKEFRNFVDTHSNVVEACTLFAQVLVDQEDFDGAEEYFNRSIR 273
              ++   GD+   + ++ ++ + ++ +     A      +  D      A + + ++I+
Sbjct: 384 ARSQL---GDK---QGAIDDYTHSLNLNPKFASAYYNRGIIRSDLGSQKAAMDDYTQAIK 437

Query: 274 VDPENASLYVHRAMLMLQARGNVDEAIKLIEKAISIDKSCMFAYETLGTIEVQRGRLEEA 333
           +DP  A  Y +R  +     GN   AI    +A+ +D +    Y   GT  +     + A
Sbjct: 438 IDPNYAQAYNNRGAIRTYL-GNYQGAIDDYIQALRVDSNYAEVYHNWGTTRINLEDNQGA 496

Query: 334 VKCFNKALPLARDEAELSHIYSLRDAAIAQMKVCER------YNIKKKVSPRSQNITKNE 387
           +  + +AL +  + A+     +     IA+  + ++      Y     ++P       N 
Sbjct: 497 IDDYTQALNINPNYAQ-----AYYGRGIARFNLGDKQGAIDDYTQALNINPNYAQAYYNR 551

Query: 388 KLAIKQLRENNDII--------IRPA-DKGGKTVVM------DKADYTQKMTSILNSNDY 432
            +A   L +    +        I P  D+      M      DK       T  LN N  
Sbjct: 552 GIARTSLGDKQGAVDDYTQALNINPNYDQAYYAWGMVCSELGDKPGAVNNYTQALNIN-- 609

Query: 433 EIIPGDP-----------------------TKTIEESEKYGNLENESG-QKHAASDFTKA 468
              P DP                       T+ +  +  Y  + N  G  +   +D+ +A
Sbjct: 610 ---PDDPETYIARGLTRSELGDNQGAIDDYTQALNLNPDYAYIYNNRGVVRSDIADYQRA 666

Query: 469 FADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPN 515
             D  +A  + P+ AD+YY RG  Y   G Y+ A+ +  ++I + PN
Sbjct: 667 IDDYTQALNISPDYADAYYNRGIAYYDLGNYQSAIDDYTRSIEIKPN 713



 Score = 82.8 bits (203), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 88/398 (22%), Positives = 174/398 (43%), Gaps = 49/398 (12%)

Query: 117 AIEDLTQLVEDTSVDPKIKVNAHIKRAVVHLHAASDFTKAFADLDEAEKVDPNVADSYYQ 176
           AI+D TQ +   +++P      +  R VV    A D+ +A  D  +A  + P+ AD+YY 
Sbjct: 632 AIDDYTQAL---NLNPDYAY-IYNNRGVVRSDIA-DYQRAIDDYTQALNISPDYADAYYN 686

Query: 177 RGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQRHFVVHKMIVPGDRERVEQSLKEFRN 236
           RG  Y   G Y+ A+ +  ++I + PN       R   ++K+   GD    + ++ +F +
Sbjct: 687 RGIAYYDLGNYQSAIDDYTRSIEIKPNCADTYVGRGTALYKL---GDS---QGAINDFHH 740

Query: 237 FVDTHSNVVEACTLFAQVLVDQEDFDGAEEYFNRSIRVDPENASLYVHRAMLMLQARGNV 296
            +D  ++  +A      V  +  D+ GA   FN ++ ++P  A  Y +R ++  + R N 
Sbjct: 741 ALDIDASYADAYNNRGIVRYELGDYQGAINDFNHALNINPNYAQAYNNRGIVRYELRDN- 799

Query: 297 DEAIKLIEKAISIDKSCMFAYETLGTIEVQRGRLEEAVKCFNKALPLARD--EAELSHIY 354
             A++    A++I+ +   AY   G + +  G  + A++ F++A+ +A +  E+ ++  Y
Sbjct: 800 QGAMEDFNHAVNINSNYAQAYNNRGIVRICLGERQLAIEDFSQAIIIAYNYTESYINRGY 859

Query: 355 SLRDAAIAQMKVCERYNIKKKVSPRSQNITKNEKLAIKQLRENNDIIIRPADKGGKTVVM 414
           +  +    Q K  E +N    ++P       N  +A   L +                  
Sbjct: 860 ARYELGNRQ-KAIEDFNQALNINPNYAQAYNNRGVAYTDLGDRE---------------W 903

Query: 415 DKADYTQKMTSILNSNDYEIIPGDPTKTIEESEKYGNLENESGQKHAASDFTKAFADLDE 474
            K D++Q +         +I P         +E Y    N +   +   D   A  D ++
Sbjct: 904 AKDDFSQAI---------QINP-------YYAEAY---NNRAIVCYELGDHQGAIEDFNQ 944

Query: 475 AEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIAL 512
           A  ++ N  ++Y +RG I    G  + A+ + ++ + L
Sbjct: 945 ALNINSNYVEAYNKRGNIRYELGDRQGAIEDFNRALNL 982



 Score = 77.8 bits (190), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 106/457 (23%), Positives = 184/457 (40%), Gaps = 53/457 (11%)

Query: 78  LTAIRHCTEEIESTSSNHTKALARLLRATVYIFTSQSTKAIEDLTQLVEDTSVDPKIKVN 137
           L  ++H   E E   +  +  LA+L      I ++ S +  + +  L     ++  ++ N
Sbjct: 149 LETLQHVETEFEQALATFSLHLAQLQ----VISSTLSPRQTDTIISLGNQAVLEIDLEEN 204

Query: 138 AH--IKRAVVHLHAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLD 195
           AH  + R +       D   A  D  ++  ++ N+   Y +RG      G  + A+ + +
Sbjct: 205 AHTYLCRGIAR-SDLGDNRGAINDFTQSISINSNLPQPYMERGIARTNLGDGQGAIDDFN 263

Query: 196 KTIALNPNFHVARAQRHFVVHKMIVPGDRERVEQSLKEFRNFVDTHSNVVEACTLFAQVL 255
           + + +NPN  +A   R  V H+     D   +++++++F   +  +S   +A T      
Sbjct: 264 QALDINPNLALAAYSRG-VAHR-----DMGYLQKAIEDFNQTLHLNSAFFDAYTKRGLAR 317

Query: 256 VDQEDFDGAEEYFNRSIRVDPENASLYVHRAMLMLQARGNVDEAIKLIEKAISIDKSCMF 315
            D  D  GA + FN+ I ++P  A  Y  R ++    R N  EAI    + I I+ +   
Sbjct: 318 YDLGDKQGAIDDFNQVITINPHFADGYAARGLVYCDLR-NYQEAINDFNQTIRINPNYAQ 376

Query: 316 AYETLGTIEVQRGRLEEAVKCFNKALPLARDEAELSHIYS---LRDAAIAQMKVCERYNI 372
           AY   G    Q G  + A+  +  +L L    A  S  Y+   +R    +Q    + Y  
Sbjct: 377 AYHNRGVARSQLGDKQGAIDDYTHSLNLNPKFA--SAYYNRGIIRSDLGSQKAAMDDYTQ 434

Query: 373 KKKVSPRSQNITKNEKLAIKQLRENNDIIIRPADKGGKTVVMDKADYTQKMTSILNSNDY 432
             K+ P       N + AI+    N    I               DY Q +   ++SN  
Sbjct: 435 AIKIDPNYAQ-AYNNRGAIRTYLGNYQGAID--------------DYIQALR--VDSNYA 477

Query: 433 EIIPGDPTKTIEESEKYGNLENESGQKHAASDFTKAFADLDEAEKVDPNVADSYYQRGQI 492
           E+     T  I       NLE+  G   A  D+T+A         ++PN A +YY RG  
Sbjct: 478 EVYHNWGTTRI-------NLEDNQG---AIDDYTQAL-------NINPNYAQAYYGRGIA 520

Query: 493 YCLFGQYEEALRNLDKTIALNPNFHVARAQRHFVWTS 529
               G  + A+ +  + + +NPN+  A   R    TS
Sbjct: 521 RFNLGDKQGAIDDYTQALNINPNYAQAYYNRGIARTS 557



 Score = 72.4 bits (176), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 104/492 (21%), Positives = 187/492 (38%), Gaps = 67/492 (13%)

Query: 75  EDYLTAIRHCTEEIESTSSNHTKALARLLRATVYIFTSQSTKAIEDLTQLVEDTSVDPKI 134
           +DY+ A+R          SN+ +        T  I    +  AI+D TQ +   +++P  
Sbjct: 464 DDYIQALR--------VDSNYAEVYHNW--GTTRINLEDNQGAIDDYTQAL---NINPNY 510

Query: 135 KVNAHIKRAVVHLHAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNL 194
              A+  R +   +   D   A  D  +A  ++PN A +YY RG      G  + A+ + 
Sbjct: 511 -AQAYYGRGIARFNLG-DKQGAIDDYTQALNINPNYAQAYYNRGIARTSLGDKQGAVDDY 568

Query: 195 DKTIALNPNFHVARAQRHFVVHKM---------------IVPGD------RERVEQSLKE 233
            + + +NPN+  A      V  ++               I P D      R      L +
Sbjct: 569 TQALNINPNYDQAYYAWGMVCSELGDKPGAVNNYTQALNINPDDPETYIARGLTRSELGD 628

Query: 234 FRNFVDTHSNVVEACTLFAQVL-------VDQEDFDGAEEYFNRSIRVDPENASLYVHRA 286
            +  +D ++  +     +A +         D  D+  A + + +++ + P+ A  Y +R 
Sbjct: 629 NQGAIDDYTQALNLNPDYAYIYNNRGVVRSDIADYQRAIDDYTQALNISPDYADAYYNRG 688

Query: 287 MLMLQARGNVDEAIKLIEKAISIDKSCMFAYETLGTIEVQRGRLEEAVKCFNKALPLARD 346
           +      GN   AI    ++I I  +C   Y   GT   + G  + A+  F+ AL +   
Sbjct: 689 IAYYDL-GNYQSAIDDYTRSIEIKPNCADTYVGRGTALYKLGDSQGAINDFHHALDI--- 744

Query: 347 EAELSHIYSLRDAAIAQMK----VCERYNIKKKVSPRSQNITKNEKLAIKQLRENNDIII 402
           +A  +  Y+ R     ++         +N    ++P       N  +   +LR+N     
Sbjct: 745 DASYADAYNNRGIVRYELGDYQGAINDFNHALNINPNYAQAYNNRGIVRYELRDN----- 799

Query: 403 RPADKGGKTVVMDKADYTQKMTSILNSNDYEIIPGDPTKTIEESEK-----YGNLE---N 454
           + A +     V   ++Y Q      N     I  G+    IE+  +     Y   E   N
Sbjct: 800 QGAMEDFNHAVNINSNYAQAYN---NRGIVRICLGERQLAIEDFSQAIIIAYNYTESYIN 856

Query: 455 ESGQKHAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNP 514
               ++   +  KA  D ++A  ++PN A +Y  RG  Y   G  E A  +  + I +NP
Sbjct: 857 RGYARYELGNRQKAIEDFNQALNINPNYAQAYNNRGVAYTDLGDREWAKDDFSQAIQINP 916

Query: 515 NFHVARAQRHFV 526
            +  A   R  V
Sbjct: 917 YYAEAYNNRAIV 928



 Score = 60.5 bits (145), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 95/457 (20%), Positives = 179/457 (39%), Gaps = 77/457 (16%)

Query: 117 AIEDLTQLVEDTSVDPKIKVNAHIKRAVVHLHAASDFTKAFADLDEAEKVDPNVADSYYQ 176
           AI+D TQ +   +++P     A+  R +    +  D   A  D  +A  ++PN   +YY 
Sbjct: 530 AIDDYTQAL---NINPNY-AQAYYNRGIART-SLGDKQGAVDDYTQALNINPNYDQAYYA 584

Query: 177 RGQIYCLFGQYEEALRNLDKTIALNPN---FHVARA------------------------ 209
            G +    G    A+ N  + + +NP+    ++AR                         
Sbjct: 585 WGMVCSELGDKPGAVNNYTQALNINPDDPETYIARGLTRSELGDNQGAIDDYTQALNLNP 644

Query: 210 -QRHFVVHKMIVPGDRERVEQSLKEFRNFVDTHSNVVEACTLFAQVLVDQEDFDGAEEYF 268
              +   ++ +V  D    ++++ ++   ++   +  +A         D  ++  A + +
Sbjct: 645 DYAYIYNNRGVVRSDIADYQRAIDDYTQALNISPDYADAYYNRGIAYYDLGNYQSAIDDY 704

Query: 269 NRSIRVDPENASLYVHRAMLMLQARGNVDEAIKLIEKAISIDKSCMFAYETLGTIEVQRG 328
            RSI + P  A  YV R   + +  G+   AI     A+ ID S   AY   G +  + G
Sbjct: 705 TRSIEIKPNCADTYVGRGTALYKL-GDSQGAINDFHHALDIDASYADAYNNRGIVRYELG 763

Query: 329 RLEEAVKCFNKALPLARDEAELSHI-----YSLRDAAIAQMKVCERYNIKKKVSPRSQNI 383
             + A+  FN AL +  + A+  +      Y LRD         E +N        + NI
Sbjct: 764 DYQGAINDFNHALNINPNYAQAYNNRGIVRYELRD----NQGAMEDFN-------HAVNI 812

Query: 384 TKNEKLAIKQLRENNDIIIRPADKGGKTVVMDKADYTQKMTSILNSND---------YEI 434
             N   A      NN  I+R    G + + ++  D++Q +    N  +         YE+
Sbjct: 813 NSNYAQAY-----NNRGIVRIC-LGERQLAIE--DFSQAIIIAYNYTESYINRGYARYEL 864

Query: 435 IPGDPTKTIEE-------SEKYGNLENESGQKHA-ASDFTKAFADLDEAEKVDPNVADSY 486
             G+  K IE+       +  Y    N  G  +    D   A  D  +A +++P  A++Y
Sbjct: 865 --GNRQKAIEDFNQALNINPNYAQAYNNRGVAYTDLGDREWAKDDFSQAIQINPYYAEAY 922

Query: 487 YQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQR 523
             R  +    G ++ A+ + ++ + +N N+  A  +R
Sbjct: 923 NNRAIVCYELGDHQGAIEDFNQALNINSNYVEAYNKR 959


>gi|13472042|ref|NP_103609.1| hypothetical protein mll2209 [Mesorhizobium loti MAFF303099]
 gi|14022787|dbj|BAB49395.1| mll2209 [Mesorhizobium loti MAFF303099]
          Length = 658

 Score = 88.6 bits (218), Expect = 7e-15,   Method: Compositional matrix adjust.
 Identities = 94/414 (22%), Positives = 176/414 (42%), Gaps = 50/414 (12%)

Query: 104 RATVYIFTSQSTKAIEDLTQLVEDTSVDPKIKVNAHIKRAVVHLHAASDFTKAFADLDEA 163
           R  ++       +A+ D  + +E   ++P+I + A+  R ++      D+ KA AD D+A
Sbjct: 107 RGLIWGHKKDFDRALADYDKAIE---LNPQIAI-AYANRGLIWNDIKHDYVKAIADFDKA 162

Query: 164 EKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALN---PNFHVARAQRHFVVHKMIV 220
            ++DP     Y  RG  Y   G Y++A+ +  + I L+   PN       ++F +   + 
Sbjct: 163 IRLDPENNGLYNLRGNAYLRKGDYDQAITSYSQAIFLDSQDPN-------QYFNLG--LA 213

Query: 221 PGDRERVEQSLKEFRNFVDTHSNVVEACTLFAQVLVDQEDFDGAEEYFNRSIRVDPENAS 280
              +  +E+++ ++   +   +N  EA    A   V + D D A   +  +IR+DP +A 
Sbjct: 214 WTTKGNLERAIADYSQAISLDANHAEAYRWRADAWVKRGDTDQALSDYTEAIRLDPGDAE 273

Query: 281 LYVHRAMLMLQARGNVDEAIKLIEKAISIDKSCMFAYETLGTIEVQRGRLEEAVKCFNKA 340
            + +RA +  + R + D AI   ++AI+   +   AY   G +   +   + A+  + KA
Sbjct: 274 TFRNRARIWERKR-DYDRAIADYDQAIAFAPNDAVAYNGRGWMWSLKHETDRAIVDYVKA 332

Query: 341 LPLARDEAELSHIYSLRDAAIAQMKVCERYNIKKKVSPRSQNITKNEKLAIKQLRENNDI 400
                   + +++ +  +  +A     ++ ++ + +S   Q +  + K A          
Sbjct: 333 TAF-----DPNYVLAYDNLGLAWW---DKGDLDRAISAFDQAVIVDPKYA---------- 374

Query: 401 IIRPADKGGKTVVMDKADYTQKMTSILNSNDYEIIPGDPTKTIEESEKYGNLENESGQKH 460
              PA        MDK  Y   +       DY +        +      GN  N  GQ  
Sbjct: 375 ---PAYNDRGLARMDKNQYDLAIA------DYNMAILIDAGFVSAYRNRGNAWNRKGQ-- 423

Query: 461 AASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNP 514
               F  A AD D+A   DP+ AD+Y  RG+       Y +A+ +LD+ I + P
Sbjct: 424 ----FDYAIADFDQAIDHDPDDADAYVGRGRSRIYKADYTKAIADLDQAIRIGP 473



 Score = 85.9 bits (211), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 105/419 (25%), Positives = 168/419 (40%), Gaps = 64/419 (15%)

Query: 122 TQLVEDTSVDPKIKVNAHIKRAVVHLHAASDFTKAFADLDEAEKVDPNVADSYYQRGQIY 181
           T ++ED +     +  A+  RA   L    +F +A AD D+A   +P  A+++  RG I+
Sbjct: 53  TNVLEDKAASASDQAVAYFNRANA-LDRNGEFDRAIADYDKAIAFNPKDAEAFNNRGLIW 111

Query: 182 CLFGQYEEALRNLDKTIALNPNFHVARAQRHFVVHKMIVPGDRERVEQSLKEFRNFVDTH 241
                ++ AL + DK I LNP   +A A R  +                      + D  
Sbjct: 112 GHKKDFDRALADYDKAIELNPQIAIAYANRGLI----------------------WNDIK 149

Query: 242 SNVVEACTLFAQVLVDQEDFDGAEEYFNRSIRVDPENASLYVHRAMLMLQARGNVDEAIK 301
            + V+A            DFD       ++IR+DPEN  LY  R    L+ +G+ D+AI 
Sbjct: 150 HDYVKAIA----------DFD-------KAIRLDPENNGLYNLRGNAYLR-KGDYDQAIT 191

Query: 302 LIEKAISIDKSCMFAYETLGTIEVQRGRLEEAVKCFNKALPLARDEAELSHIYSLR-DAA 360
              +AI +D      Y  LG     +G LE A+  +++A+ L  + AE    Y  R DA 
Sbjct: 192 SYSQAIFLDSQDPNQYFNLGLAWTTKGNLERAIADYSQAISLDANHAE---AYRWRADAW 248

Query: 361 IAQM---KVCERYNIKKKVSPRSQNITKNEKLAIKQLRENNDIIIRPADKGGKTVVMDKA 417
           + +    +    Y    ++ P      +N +  I + + + D  I   D+       D  
Sbjct: 249 VKRGDTDQALSDYTEAIRLDPGDAETFRN-RARIWERKRDYDRAIADYDQAIAFAPNDAV 307

Query: 418 DYTQK--MTSILNSNDYEII------PGDPTKTIEESEKYGNLENESGQKHAASDFTKAF 469
            Y  +  M S+ +  D  I+        DP   +     Y NL      K    D  +A 
Sbjct: 308 AYNGRGWMWSLKHETDRAIVDYVKATAFDPNYVLA----YDNLGLAWWDK---GDLDRAI 360

Query: 470 ADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQRHFVWT 528
           +  D+A  VDP  A +Y  RG       QY+ A+ + +  I ++  F  A   R   W 
Sbjct: 361 SAFDQAVIVDPKYAPAYNDRGLARMDKNQYDLAIADYNMAILIDAGFVSAYRNRGNAWN 419



 Score = 45.8 bits (107), Expect = 0.056,   Method: Compositional matrix adjust.
 Identities = 40/135 (29%), Positives = 60/135 (44%), Gaps = 20/135 (14%)

Query: 104 RATVYIFTSQSTKAIEDLTQLVEDTSVDPKIKVNAHIKRAVVHLHAASDFTKAFADLDEA 163
           R   +    Q   AI D  Q ++    DP    +A++ R    ++ A D+TKA ADLD+A
Sbjct: 414 RGNAWNRKGQFDYAIADFDQAIDH---DPD-DADAYVGRGRSRIYKA-DYTKAIADLDQA 468

Query: 164 EKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNP------------NFHV---AR 208
            ++ P  A ++  RG        Y  AL + D+ I L+P            +F+    A+
Sbjct: 469 IRIGPKSARAHDTRGLAMVYKADYAGALADYDEAIRLSPKNASAYRNRGIASFYFGPPAK 528

Query: 209 AQRHFVVHKMIVPGD 223
           AQ  F     I PGD
Sbjct: 529 AQADFEQAAAIKPGD 543



 Score = 40.4 bits (93), Expect = 2.7,   Method: Compositional matrix adjust.
 Identities = 36/135 (26%), Positives = 55/135 (40%), Gaps = 40/135 (29%)

Query: 153 FTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQRH 212
           F  A AD D+A   DP+ AD+Y  RG+       Y +A+ +LD+ I + P    ARA   
Sbjct: 424 FDYAIADFDQAIDHDPDDADAYVGRGRSRIYKADYTKAIADLDQAIRIGP--KSARAH-- 479

Query: 213 FVVHKMIVPGDRERVEQSLKEFRNFVDTHSNVVEACTLFAQVLVDQEDFDGAEEYFNRSI 272
                                     DT              +V + D+ GA   ++ +I
Sbjct: 480 --------------------------DTRG----------LAMVYKADYAGALADYDEAI 503

Query: 273 RVDPENASLYVHRAM 287
           R+ P+NAS Y +R +
Sbjct: 504 RLSPKNASAYRNRGI 518


>gi|384485693|gb|EIE77873.1| hypothetical protein RO3G_02577 [Rhizopus delemar RA 99-880]
          Length = 451

 Score = 88.6 bits (218), Expect = 8e-15,   Method: Compositional matrix adjust.
 Identities = 72/264 (27%), Positives = 123/264 (46%), Gaps = 24/264 (9%)

Query: 8   QHAKEEISKRSFFKPSKQFIKTYLKSFPNDPILQPDGLSNGVELTNGDTNESHELDLLSK 67
           + AKE +  +    PS  F+  YL SF   P++Q     N   + + ++ +++     +K
Sbjct: 208 RKAKEIMKNKKPRLPSPAFVNAYLDSF--RPVVQ-----NLAGIPDDESGDAY----YAK 256

Query: 68  AKRAFEHEDYLTAIRHCTEEIESTSSNHTKALARLLRATVYIFTSQSTKAIEDLTQLVED 127
           A RA   +DY TA     + +E   S   +A A  L  T       +  A+    + VE 
Sbjct: 257 AYRAIAEKDYTTASESVEKAVELGCSRQYQAHALNLMGTFAFLKGDTASALNYFNKAVE- 315

Query: 128 TSVDPKIKVNAHIKRAVVHLHAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQY 187
              DPK  V ++IKR+ +++    D    +   DEA  ++P+  D YY RGQ+  + GQ+
Sbjct: 316 --ADPKF-VQSYIKRSSIYMEQG-DIESTYKQFDEAIAINPSDPDIYYHRGQVNYISGQF 371

Query: 188 EEALRNLDKTIALNPNFHVARAQRHFVVHKM-IVPGDRERVEQSLKEFRNFVDTHSNVVE 246
           + A ++  ++I L+ +F  A  Q   V +K+  V         +LK+F N  D H+    
Sbjct: 372 DAAAKDYSESIKLDDSFVYAHIQLGVVQYKLGSVSSSMSTFNNTLKKFANSTDVHN---- 427

Query: 247 ACTLFAQVLVDQEDFDGAEEYFNR 270
               + ++LVDQ+    A + F R
Sbjct: 428 ---YYGELLVDQQKLTEAIDMFRR 448



 Score = 51.6 bits (122), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 41/215 (19%), Positives = 93/215 (43%), Gaps = 14/215 (6%)

Query: 167 DPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQRHFVVHKMIVPGD--- 223
           D    D+YY +         Y  A  +++K + L          R +  H + + G    
Sbjct: 246 DDESGDAYYAKAYRAIAEKDYTTASESVEKAVELG-------CSRQYQAHALNLMGTFAF 298

Query: 224 -RERVEQSLKEFRNFVDTHSNVVEACTLFAQVLVDQEDFDGAEEYFNRSIRVDPENASLY 282
            +     +L  F   V+     V++    + + ++Q D +   + F+ +I ++P +  +Y
Sbjct: 299 LKGDTASALNYFNKAVEADPKFVQSYIKRSSIYMEQGDIESTYKQFDEAIAINPSDPDIY 358

Query: 283 VHRAMLMLQARGNVDEAIKLIEKAISIDKSCMFAYETLGTIEVQRGRLEEAVKCFNKALP 342
            HR  +   + G  D A K   ++I +D S ++A+  LG ++ + G +  ++  FN  L 
Sbjct: 359 YHRGQVNYIS-GQFDAAAKDYSESIKLDDSFVYAHIQLGVVQYKLGSVSSSMSTFNNTLK 417

Query: 343 LARDEAELSHIYSLRDAAIAQMKVCERYNIKKKVS 377
              +  ++ + Y   +  + Q K+ E  ++ +++ 
Sbjct: 418 KFANSTDVHNYYG--ELLVDQQKLTEAIDMFRRIG 450



 Score = 40.8 bits (94), Expect = 2.0,   Method: Compositional matrix adjust.
 Identities = 20/64 (31%), Positives = 34/64 (53%)

Query: 463 SDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQ 522
            D    +   DEA  ++P+  D YY RGQ+  + GQ++ A ++  ++I L+ +F  A  Q
Sbjct: 335 GDIESTYKQFDEAIAINPSDPDIYYHRGQVNYISGQFDAAAKDYSESIKLDDSFVYAHIQ 394

Query: 523 RHFV 526
              V
Sbjct: 395 LGVV 398


>gi|333987462|ref|YP_004520069.1| hypothetical protein MSWAN_1251 [Methanobacterium sp. SWAN-1]
 gi|333825606|gb|AEG18268.1| Tetratricopeptide TPR_2 repeat-containing protein [Methanobacterium
           sp. SWAN-1]
          Length = 1161

 Score = 88.6 bits (218), Expect = 8e-15,   Method: Compositional matrix adjust.
 Identities = 102/481 (21%), Positives = 207/481 (43%), Gaps = 36/481 (7%)

Query: 57  NESHELDLLSKAKRAFEHEDYLTAIRHCTEEIESTSSNHTKALARLLRATVYIFTSQSTK 116
           N+   L  L K   + E+ D L  +   +  I    SN   +L  L R           +
Sbjct: 199 NKGISLAHLEKYDESIEYFDKLIELNPNSPFIHIVYSNKGLSLGNLERYE---------E 249

Query: 117 AIEDLTQLVEDTSVDPKIKVNAHIKRAVVHLHAASDFTKAFADLDEAEKVDPNVADSYYQ 176
           AI+ L + +E  S + +    A   + V+       + +A    ++A ++ P++A SY++
Sbjct: 250 AIKYLDKSIELNSENAE----AWFNKGVI-FETLGKYDEAIEYYEKALEIAPDLALSYHR 304

Query: 177 RGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQRHFVVHKMIVPGDRERVEQSLKEFRN 236
             +I  + G+YEEA++  DK+IAL+           F   K +   D  R E+S+  F  
Sbjct: 305 ISEILRILGKYEEAIKYQDKSIALDS------KNAEFWFSKGLSLSDLGRFEESINPFDK 358

Query: 237 FVDTHSNVVEACTLFAQVLVDQEDFDGAEEYFNRSIRVDPENASLYVHRAMLMLQARGNV 296
            ++ + N  +A +     L +    + A    N +I  +P +  L+ ++ + ++  +   
Sbjct: 359 ALNINPNFSDAYSAKCASLRNLRKNEDALNCINTAIEFNPNSPELWFNKGLSLIDLK-RY 417

Query: 297 DEAIKLIEKAISIDKSCMFAYETLGTIEVQRGRLEEAVKCFNKALPL------ARDEAEL 350
           +E+I+   +A++++     AY + G       +  EA+KCFN+AL +      A +   +
Sbjct: 418 EESIRCFNEAVTLNHKFALAYNSKGFSLNHLDKFNEAIKCFNRALNIDSTLETAFNNKGI 477

Query: 351 SHIYSLRDAAIAQM-KVCERYNIKKKVSPRSQNITKNEKLAIKQLRENNDIIIRPADKGG 409
           SH+      A+ Q  K  E +N   +++P    +  N+  A+  + E N+ I    DK  
Sbjct: 478 SHL------ALGQYEKALECFNEALRINPYFTEVYVNKGSALGNMEEYNEEI-ECYDKAL 530

Query: 410 KTVVMDKADYTQKMTSILNSNDYEIIPGDPTKTIEESEKYGNLENESGQK-HAASDFTKA 468
           +        +  K +++ N   Y        ++IE +  YG + N  G        F  A
Sbjct: 531 ELNQYIFEAWYNKGSALSNLGKYNESINCFNQSIEINPNYGEVYNNKGVSFENLGKFNHA 590

Query: 469 FADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQRHFVWT 528
               D+A ++D  +  ++  +G +    G+YE  + + +  + +  +F  A   +  ++ 
Sbjct: 591 IKCFDKALELDSTLFITHVNKGLVLAKIGKYERGIESCNNALKIQSDFAEAYMGKGIIFL 650

Query: 529 S 529
           +
Sbjct: 651 T 651



 Score = 79.0 bits (193), Expect = 7e-12,   Method: Compositional matrix adjust.
 Identities = 95/441 (21%), Positives = 193/441 (43%), Gaps = 46/441 (10%)

Query: 117 AIEDLTQLVEDTSV-DPKIKVNAHIKRAVVH----LHAASDFTKAFADLDEAEKVDPNVA 171
           A+++L ++ E     D  IK + +  +A+ +    L   S++ KA    D+A K+DP+ A
Sbjct: 67  ALQNLKKIDEAIKCYDNAIKTDPNYSKALNNKGTLLTKISEYDKAIKCFDKALKIDPDYA 126

Query: 172 DSYYQRGQIYCLFGQYEEALRNLDKTIALNPN-----FHVARAQRHF------------- 213
           + +  +G      G+YEEA+++ +K I   P      ++     R+              
Sbjct: 127 EVHNNKGLALGYLGRYEEAIKSFNKAINYEPKNIIFLYNKGELLRNLKRYEEAIESYDRI 186

Query: 214 ----------VVHKMIVPGDRERVEQSLKEFRNFVDTHSNVVEACTLFAQ---VLVDQED 260
                     +++K I     E+ ++S++ F   ++ + N      +++     L + E 
Sbjct: 187 INIKNDFFDAILNKGISLAHLEKYDESIEYFDKLIELNPNSPFIHIVYSNKGLSLGNLER 246

Query: 261 FDGAEEYFNRSIRVDPENASLYVHRAMLMLQARGNVDEAIKLIEKAISIDKSCMFAYETL 320
           ++ A +Y ++SI ++ ENA  + ++ ++  +  G  DEAI+  EKA+ I      +Y  +
Sbjct: 247 YEEAIKYLDKSIELNSENAEAWFNKGVI-FETLGKYDEAIEYYEKALEIAPDLALSYHRI 305

Query: 321 GTIEVQRGRLEEAVKCFNKALPLARDEAE--LSHIYSLRDAAIAQMKVCERYNIKKKVSP 378
             I    G+ EEA+K  +K++ L    AE   S   SL D    +  +   ++    ++P
Sbjct: 306 SEILRILGKYEEAIKYQDKSIALDSKNAEFWFSKGLSLSDLGRFEESI-NPFDKALNINP 364

Query: 379 RSQNITKNEKLAIKQLRENNDII--IRPADKGGKTVVMDKADYTQKMTSILNSNDYEIIP 436
              +    +  +++ LR+N D +  I  A +           +  K  S+++   YE   
Sbjct: 365 NFSDAYSAKCASLRNLRKNEDALNCINTAIEFNPN---SPELWFNKGLSLIDLKRYEESI 421

Query: 437 GDPTKTIEESEKYGNLENESGQKHAASD-FTKAFADLDEAEKVDPNVADSYYQRGQIYCL 495
               + +  + K+    N  G      D F +A    + A  +D  +  ++  +G  +  
Sbjct: 422 RCFNEAVTLNHKFALAYNSKGFSLNHLDKFNEAIKCFNRALNIDSTLETAFNNKGISHLA 481

Query: 496 FGQYEEALRNLDKTIALNPNF 516
            GQYE+AL   ++ + +NP F
Sbjct: 482 LGQYEKALECFNEALRINPYF 502



 Score = 72.0 bits (175), Expect = 8e-10,   Method: Compositional matrix adjust.
 Identities = 85/377 (22%), Positives = 158/377 (41%), Gaps = 35/377 (9%)

Query: 153 FTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPN---FHVARA 209
           + +A    D    +  +  D+   +G       +Y+E++   DK I LNPN    H+  +
Sbjct: 176 YEEAIESYDRIINIKNDFFDAILNKGISLAHLEKYDESIEYFDKLIELNPNSPFIHIVYS 235

Query: 210 QRHFVVHKMIVPGDRERVEQSLKEFRNFVDTHSNVVEACTLFAQVLVDQEDFDGAEEYFN 269
                 +K +  G+ ER E+++K     ++ +S   EA      +      +D A EY+ 
Sbjct: 236 ------NKGLSLGNLERYEEAIKYLDKSIELNSENAEAWFNKGVIFETLGKYDEAIEYYE 289

Query: 270 RSIRVDPENASLYVHRAMLMLQARGNVDEAIKLIEKAISIDKSCMFAYETLGTIEVQRGR 329
           +++ + P+ A  Y HR   +L+  G  +EAIK  +K+I++D      + + G      GR
Sbjct: 290 KALEIAPDLALSY-HRISEILRILGKYEEAIKYQDKSIALDSKNAEFWFSKGLSLSDLGR 348

Query: 330 LEEAVKCFNKALPLARDEAELSHIYSLRDAAIAQMKVCER----YNIKKKVSPRSQNITK 385
            EE++  F+KAL +       S  YS + A++  ++  E      N   + +P S  +  
Sbjct: 349 FEESINPFDKALNI---NPNFSDAYSAKCASLRNLRKNEDALNCINTAIEFNPNSPELWF 405

Query: 386 NEKLAIKQLRENNDIIIRPADKGGKTVVMDKADYTQKMTSILNSNDYEIIPGDP-TKTIE 444
           N+ L++  L+   + I             +      K     NS  + +   D   + I+
Sbjct: 406 NKGLSLIDLKRYEESI---------RCFNEAVTLNHKFALAYNSKGFSLNHLDKFNEAIK 456

Query: 445 ESEKYGNLE-------NESGQKHAA-SDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLF 496
              +  N++       N  G  H A   + KA    +EA +++P   + Y  +G      
Sbjct: 457 CFNRALNIDSTLETAFNNKGISHLALGQYEKALECFNEALRINPYFTEVYVNKGSALGNM 516

Query: 497 GQYEEALRNLDKTIALN 513
            +Y E +   DK + LN
Sbjct: 517 EEYNEEIECYDKALELN 533



 Score = 64.7 bits (156), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 56/250 (22%), Positives = 112/250 (44%), Gaps = 14/250 (5%)

Query: 147 LHAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHV 206
           L+    F +A    + A  +D  +  ++  +G  +   GQYE+AL   ++ + +NP F  
Sbjct: 445 LNHLDKFNEAIKCFNRALNIDSTLETAFNNKGISHLALGQYEKALECFNEALRINPYF-- 502

Query: 207 ARAQRHFVVHKMIVPGDRERVEQSLKEFRNFVDTHSNVVEACTLFAQVLVDQEDFDGAEE 266
                   V+K    G+ E   + ++ +   ++ +  + EA       L +   ++ +  
Sbjct: 503 ----TEVYVNKGSALGNMEEYNEEIECYDKALELNQYIFEAWYNKGSALSNLGKYNESIN 558

Query: 267 YFNRSIRVDPENASLYVHRAMLMLQARGNVDEAIKLIEKAISIDKSCMFAYETLGTIEVQ 326
            FN+SI ++P    +Y ++ +   +  G  + AIK  +KA+ +D +    +   G +  +
Sbjct: 559 CFNQSIEINPNYGEVYNNKGV-SFENLGKFNHAIKCFDKALELDSTLFITHVNKGLVLAK 617

Query: 327 RGRLEEAVKCFNKALPLARDEAELSHIYSLRDAAIAQMKVCERYNIKKKVSPRSQNITKN 386
            G+ E  ++  N AL +  D AE     +     I  + +  +YN  K     ++NI  N
Sbjct: 618 IGKYERGIESCNNALKIQSDFAE-----AYMGKGIIFLTL-HKYNDAKYELKIAENIF-N 670

Query: 387 EKLAIKQLRE 396
           EK  +KQ +E
Sbjct: 671 EKNELKQAKE 680



 Score = 56.2 bits (134), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 84/331 (25%), Positives = 141/331 (42%), Gaps = 64/331 (19%)

Query: 257 DQEDFDGAEEYFNRSIRV--DPENASLYVHRAMLMLQARGNVDEAIKLIEKAISIDKSCM 314
           + +D+  A + F++ I++  DP+ A  Y     L LQ    +DEAIK  + AI  D +  
Sbjct: 37  ENKDYKRAIDVFDKIIQLTQDPK-AWFY---KGLALQNLKKIDEAIKCYDNAIKTDPNYS 92

Query: 315 FAYETLGTIEVQRGRLEEAVKCFNKALPLARDEAELSHIYSLRDAAIAQM-KVCERYNIK 373
            A    GT+  +    ++A+KCF+KAL +  D AE+ +   L    + +  +  + +N  
Sbjct: 93  KALNNKGTLLTKISEYDKAIKCFDKALKIDPDYAEVHNNKGLALGYLGRYEEAIKSFNKA 152

Query: 374 KKVSPRSQNITKNEKLAIKQLRE--------------NNDIIIRPADKGGKTVVMDKAD- 418
               P++     N+   ++ L+                ND      +KG     ++K D 
Sbjct: 153 INYEPKNIIFLYNKGELLRNLKRYEEAIESYDRIINIKNDFFDAILNKGISLAHLEKYDE 212

Query: 419 ---YTQKMTSILNSNDYEIIPGDPTKTIEESEK---YGNLEN------------ESGQKH 460
              Y  K+         E+ P  P   I  S K    GNLE             E   ++
Sbjct: 213 SIEYFDKLI--------ELNPNSPFIHIVYSNKGLSLGNLERYEEAIKYLDKSIELNSEN 264

Query: 461 AASDFTKA-----FADLDEA----EK---VDPNVADSYYQRGQIYCLFGQYEEALRNLDK 508
           A + F K          DEA    EK   + P++A SY++  +I  + G+YEEA++  DK
Sbjct: 265 AEAWFNKGVIFETLGKYDEAIEYYEKALEIAPDLALSYHRISEILRILGKYEEAIKYQDK 324

Query: 509 TIALNPNFHVARAQRHFVWTSTLAELMAFSD 539
           +IAL+       A+  F    +L++L  F +
Sbjct: 325 SIALDS----KNAEFWFSKGLSLSDLGRFEE 351


>gi|225621425|ref|YP_002722684.1| hypothetical protein BHWA1_02527 [Brachyspira hyodysenteriae WA1]
 gi|225216246|gb|ACN84980.1| hypothetical protein BHWA1_02527 [Brachyspira hyodysenteriae WA1]
          Length = 617

 Score = 88.6 bits (218), Expect = 9e-15,   Method: Compositional matrix adjust.
 Identities = 101/411 (24%), Positives = 184/411 (44%), Gaps = 21/411 (5%)

Query: 117 AIEDLTQLVEDTSVDPKIKVNAHIKRAVVHLHAASDFTKAFADLDEAEKVDPNVADSYYQ 176
           AIED  +++E   +D K  ++A+  R V   +    F +A  D ++  +++PN   +Y  
Sbjct: 212 AIEDYNKVIE---LDNK-NIDAYNNRGVSKNYLQL-FDEAMKDFNKILELEPNNYCAYSN 266

Query: 177 RGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQRHFVVHKMIVPGDRERVEQSLKEFRN 236
           RG      G Y+EA+ + +K I +NPN+  A   R     ++ +       +++++++ N
Sbjct: 267 RGNSKNDLGLYKEAIEDYNKAIEINPNYSDAYYNRGNSKKELGL------FKEAIEDYDN 320

Query: 237 FVDTHSNVVEACTLFAQVLVDQEDFDGAEEYFNRSIRVDPENASLYVHRAMLMLQARGNV 296
            +    N + A         D E ++ A + +++ I++D      Y +RA    +  G  
Sbjct: 321 AIKWKPNDINAYMSRGNAKYDLELYEEAMKDYDKIIKLDHNYVDAYYNRANAKREL-GLY 379

Query: 297 DEAIKLIEKAISIDKSCMFAYETLGTIEVQRGRLEEAVKCFNKALPLARDEAELSHIYSL 356
            E+IK  +KAI ++ +   AY   G  + + G  EEA+K + +++ L  D  E  +    
Sbjct: 380 KESIKDYDKAIYLNPNYSDAYNNRGLSKSELGMYEEAIKDYEESIDLCADNPEAYYNIGS 439

Query: 357 RDAAIAQMKVCERYNIKK-KVSPRSQNITKNEKLAIKQL---RENNDIIIRPADKGGKTV 412
               +  +K   +Y  K  ++ P       N  L+   L   +E     I+  DK  +  
Sbjct: 440 AKYDLDLLKDSIKYYDKAIELRPTYSEAYNNRGLSKNDLGLYKE----AIKDYDKSIELN 495

Query: 413 VMDKADYTQKMTSILNSNDYEIIPGDPTKTIEESEKYGN-LENESGQKHAASDFTKAFAD 471
             D   Y  +  +  +   Y+    D TK IE +  Y N   N    K     + +A  D
Sbjct: 496 PNDSNTYNNRGLTKYSLGLYKEAIKDYTKAIELTPNYTNAYGNRGSAKDELGQYKEAIKD 555

Query: 472 LDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQ 522
            D+A ++ PN A  Y  RG +    G Y+EAL++  K + L+PN   A++ 
Sbjct: 556 YDKAIELAPNTAYLYNDRGWVKKNAGLYKEALKDYKKALELDPNNEYAKSN 606



 Score = 73.2 bits (178), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 62/245 (25%), Positives = 112/245 (45%), Gaps = 17/245 (6%)

Query: 105 ATVYIFTSQSTKAIEDLTQLVEDTSVDPKIK---VNAHIKRAVVHLHAASD---FTKAFA 158
           +  Y     S K +    + +ED     K K   +NA++ R     +A  D   + +A  
Sbjct: 295 SDAYYNRGNSKKELGLFKEAIEDYDNAIKWKPNDINAYMSRG----NAKYDLELYEEAMK 350

Query: 159 DLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQRHFVVHKM 218
           D D+  K+D N  D+YY R       G Y+E++++ DK I LNPN+  A   R     ++
Sbjct: 351 DYDKIIKLDHNYVDAYYNRANAKRELGLYKESIKDYDKAIYLNPNYSDAYNNRGLSKSEL 410

Query: 219 IVPGDRERVEQSLKEFRNFVDTHSNVVEACTLFAQVLVDQEDFDGAEEYFNRSIRVDPEN 278
            +       E+++K++   +D  ++  EA         D +    + +Y++++I + P  
Sbjct: 411 GM------YEEAIKDYEESIDLCADNPEAYYNIGSAKYDLDLLKDSIKYYDKAIELRPTY 464

Query: 279 ASLYVHRAMLMLQARGNVDEAIKLIEKAISIDKSCMFAYETLGTIEVQRGRLEEAVKCFN 338
           +  Y +R  L     G   EAIK  +K+I ++ +    Y   G  +   G  +EA+K + 
Sbjct: 465 SEAYNNRG-LSKNDLGLYKEAIKDYDKSIELNPNDSNTYNNRGLTKYSLGLYKEAIKDYT 523

Query: 339 KALPL 343
           KA+ L
Sbjct: 524 KAIEL 528



 Score = 52.0 bits (123), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 52/215 (24%), Positives = 97/215 (45%), Gaps = 18/215 (8%)

Query: 117 AIEDLTQLVEDTSVDPKIKVNAHIKRAVVHLHAASDFTKAFADLDEAEKVDPNVADSYYQ 176
           AI+D  + ++  + +P+   N  I  A   L    D  K +   D+A ++ P  +++Y  
Sbjct: 416 AIKDYEESIDLCADNPEAYYN--IGSAKYDLDLLKDSIKYY---DKAIELRPTYSEAYNN 470

Query: 177 RGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQRHFVVHKMIVPGDRERVEQSLKEFR- 235
           RG      G Y+EA+++ DK+I LNPN       R    + + +   +E ++   K    
Sbjct: 471 RGLSKNDLGLYKEAIKDYDKSIELNPNDSNTYNNRGLTKYSLGLY--KEAIKDYTKAIEL 528

Query: 236 --NFVDTHSNVVEACTLFAQVLVDQEDFDGAEEYFNRSIRVDPENASLYVHRAMLMLQAR 293
             N+ + + N   A     Q     +D+D       ++I + P  A LY  R  +   A 
Sbjct: 529 TPNYTNAYGNRGSAKDELGQYKEAIKDYD-------KAIELAPNTAYLYNDRGWVKKNA- 580

Query: 294 GNVDEAIKLIEKAISIDKSCMFAYETLGTIEVQRG 328
           G   EA+K  +KA+ +D +  +A   + +++ + G
Sbjct: 581 GLYKEALKDYKKALELDPNNEYAKSNIESLKKEHG 615



 Score = 47.0 bits (110), Expect = 0.024,   Method: Compositional matrix adjust.
 Identities = 45/174 (25%), Positives = 81/174 (46%), Gaps = 17/174 (9%)

Query: 173 SYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVAR-----AQRHFVVHKMIVPGDRERV 227
           +YY RG      G +++A+++ DK I L+ N+  A      A+ H  +HK  +    + +
Sbjct: 161 AYYNRGLARNNLGFFKKAIKDYDKAIELSKNYKDAYYNRGVAKNHAGLHKEAIEDYNKVI 220

Query: 228 EQSLKEFRNFVDTHSNVVEACTLFAQVLVDQEDFDGAEEYFNRSIRVDPENASLYVHRAM 287
           E   K     +D ++N       + Q+      FD A + FN+ + ++P N   Y +R  
Sbjct: 221 ELDNKN----IDAYNNRG-VSKNYLQL------FDEAMKDFNKILELEPNNYCAYSNRGN 269

Query: 288 LMLQARGNVDEAIKLIEKAISIDKSCMFAYETLGTIEVQRGRLEEAVKCFNKAL 341
                 G   EAI+   KAI I+ +   AY   G  + + G  +EA++ ++ A+
Sbjct: 270 SK-NDLGLYKEAIEDYNKAIEINPNYSDAYYNRGNSKKELGLFKEAIEDYDNAI 322



 Score = 45.4 bits (106), Expect = 0.079,   Method: Compositional matrix adjust.
 Identities = 62/260 (23%), Positives = 101/260 (38%), Gaps = 42/260 (16%)

Query: 268 FNRSIRVDPENASLYVHRAMLMLQARGNVDEAIKLIEKAISIDKSCMFAYETLGTIEVQR 327
           ++++I +       Y +R +    A G   EAI+   K I +D   + AY   G  +   
Sbjct: 182 YDKAIELSKNYKDAYYNRGVAKNHA-GLHKEAIEDYNKVIELDNKNIDAYNNRGVSKNYL 240

Query: 328 GRLEEAVKCFNKALPLARDEAELSHIYSLRDAAIAQM----KVCERYNIKKKVSPRSQNI 383
              +EA+K FNK L L   E      YS R  +   +    +  E YN   +++P   + 
Sbjct: 241 QLFDEAMKDFNKILEL---EPNNYCAYSNRGNSKNDLGLYKEAIEDYNKAIEINPNYSDA 297

Query: 384 TKNEKLAIKQLRENNDIIIRPADKGGKTVVMDKADYTQKMTSILNSNDYEIIPGDPTKTI 443
             N   + K+L      + + A +     +  K                   P D    +
Sbjct: 298 YYNRGNSKKELG-----LFKEAIEDYDNAIKWK-------------------PNDINAYM 333

Query: 444 EESEKYGNLENESGQKHAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEAL 503
                 GN       K+    + +A  D D+  K+D N  D+YY R       G Y+E++
Sbjct: 334 SR----GN------AKYDLELYEEAMKDYDKIIKLDHNYVDAYYNRANAKRELGLYKESI 383

Query: 504 RNLDKTIALNPNFHVARAQR 523
           ++ DK I LNPN+  A   R
Sbjct: 384 KDYDKAIYLNPNYSDAYNNR 403



 Score = 42.0 bits (97), Expect = 0.78,   Method: Compositional matrix adjust.
 Identities = 61/273 (22%), Positives = 109/273 (39%), Gaps = 22/273 (8%)

Query: 256 VDQEDFDGAEEYFNRSIRVDPENASLYVHRAMLMLQARGNVDEAIKLIEKAISIDKSCMF 315
           +D  D D  +EYF+              +   + L   G+   AI    +AI +      
Sbjct: 114 IDINDLDTLDEYFD-------------CNTNGVALNNMGSYRYAIDKYSEAIDLIDYYAL 160

Query: 316 AYETLGTIEVQRGRLEEAVKCFNKALPLARDEAELSHIYSL-RDAAIAQMKVCERYNIKK 374
           AY   G      G  ++A+K ++KA+ L+++  +  +   + ++ A    +  E YN   
Sbjct: 161 AYYNRGLARNNLGFFKKAIKDYDKAIELSKNYKDAYYNRGVAKNHAGLHKEAIEDYNKVI 220

Query: 375 KVSPRSQNITKNEKLAIKQLRENNDIIIRPADKGGKTVVMDKADYTQKMTSILNSND--- 431
           ++  ++ +   N  ++   L+    +         K + ++  +Y        + ND   
Sbjct: 221 ELDNKNIDAYNNRGVSKNYLQ----LFDEAMKDFNKILELEPNNYCAYSNRGNSKNDLGL 276

Query: 432 YEIIPGDPTKTIEESEKYGN-LENESGQKHAASDFTKAFADLDEAEKVDPNVADSYYQRG 490
           Y+    D  K IE +  Y +   N    K     F +A  D D A K  PN  ++Y  RG
Sbjct: 277 YKEAIEDYNKAIEINPNYSDAYYNRGNSKKELGLFKEAIEDYDNAIKWKPNDINAYMSRG 336

Query: 491 QIYCLFGQYEEALRNLDKTIALNPNFHVARAQR 523
                   YEEA+++ DK I L+ N+  A   R
Sbjct: 337 NAKYDLELYEEAMKDYDKIIKLDHNYVDAYYNR 369


>gi|443915721|gb|ELU37069.1| ADP/ATP carrier receptor [Rhizoctonia solani AG-1 IA]
          Length = 1054

 Score = 88.2 bits (217), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 103/389 (26%), Positives = 165/389 (42%), Gaps = 54/389 (13%)

Query: 8    QHAKEEISKRSFFKPSKQFIKTYLKSF-PNDPILQPDGLSNGVELTNGDTNESHELDLLS 66
            + A+E +  R    PS  FI  Y  +F P   ++ PD        T GD        +L 
Sbjct: 676  KQAEEIMRAREPRLPSVTFIGAYFAAFRPRPNVILPD------YATKGD-------HMLL 722

Query: 67   KAKRAFEHEDYLTAIRHCTEEIEST-SSNHTKALARLL--RATVYIFTSQSTKAIEDLTQ 123
            +A+ A     +  A       I++  S N  + L   L  R T       +  A  D   
Sbjct: 723  EAQEALSESQFTKAHELVNAAIDAGLSENWNEGLGEALNLRGTFKFLMGDTVGAKADF-- 780

Query: 124  LVEDTSVDPKIKVNAHIKRAVVHLHAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCL 183
             V  T   P + V + +K A V++  +       A     EK DPN AD YY RGQ    
Sbjct: 781  -VASTQAHPDL-VQSWVKIASVYMELSEAEAAFAAFESAIEK-DPNCADIYYHRGQ---- 833

Query: 184  FGQYEEALRNLDKTIALN--------PNFHVA-RAQRHFVVHKMIVP-----GDRERVEQ 229
                 E+ R L + +           P    A +  R  + + +I P      +  R  Q
Sbjct: 834  -----ESGRGLPEVVQAGFQVCVLTYPTCGCAVQNGRSRLFNGLIPPMLAFLPEPRRTVQ 888

Query: 230  SLKEFRNFVDTHSNVVEACTLFAQVLVDQEDFDGAEEYFNRSIRVDPENASL-------- 281
             L   R      SN+        ++L+DQ+ F  A E F+RSI ++ +   L        
Sbjct: 889  LLVS-RGLRWGESNLRLITGESGELLLDQQRFQEAIEKFDRSIEIERQKWVLKILPNPLP 947

Query: 282  YVHRAMLMLQARGNVDEAIKLIEKAISIDKSCMFAYETLGTIEVQRGRLEEAVKCFNKAL 341
             V++A+ + Q + ++  A +L ++A+++D  C  A  TL  + +Q+GR+EEA+  F+K  
Sbjct: 948  LVNKALALYQWQQDLPSATQLCKEALTLDDECDAAVATLAQLSLQQGRVEEAIDMFSKHA 1007

Query: 342  PLARDEAELSHIYSLRDAAIAQMKVCERY 370
             +AR EAEL    S  +A+ AQ++  + Y
Sbjct: 1008 SIARTEAELVQALSYENASRAQLEFQKNY 1036


>gi|384210167|ref|YP_005595887.1| hypothetical protein Bint_2713 [Brachyspira intermedia PWS/A]
 gi|343387817|gb|AEM23307.1| TPR domain-containing protein [Brachyspira intermedia PWS/A]
          Length = 853

 Score = 87.8 bits (216), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 102/430 (23%), Positives = 193/430 (44%), Gaps = 69/430 (16%)

Query: 114 STKAIEDLTQLV----EDTSVDPKIKVNAHIKRAVVHLHAASDFTKAFADLDEAEKVDPN 169
           S+K IED  +LV    E+ + D  +  N     +++++     + +A  D ++A K++PN
Sbjct: 33  SSKKIEDAIKLVNRAIEEYNNDEDLYFNRGKLYSIINM-----YDEAIEDFNKAIKLNPN 87

Query: 170 VADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQRHFVVHKMIVPGDRERVEQ 229
              +Y+ RG       +YEEA+ + +K I LNP       + +F +         E+ E+
Sbjct: 88  NEKAYFNRGITKVKLEKYEEAIEDFNKIIKLNP----KNERGYFNIG--FAKASLEKYEE 141

Query: 230 SLKEFRNFVDTHSNVVEACTLFAQVLVDQEDFDGAEEYFNRSIRVDPENASLYVHRAMLM 289
           ++K+F   +  ++   EA        V  E    A E FN+SI+++ +N   Y +R +  
Sbjct: 142 AIKDFNEVIKLNTKNEEAYFFRGLAKVKLEKDKEAIEDFNKSIKLNSKNEEAYFNRGIAK 201

Query: 290 LQARGNVDEAIKLIEKAISIDKSCMFAYETLGTIEVQRGRLEEAVKCFNKALPL--ARDE 347
            +     +EAIK   + I ++ +   AY   G  +      EEA+K FN+ + L    ++
Sbjct: 202 TKLEI-YEEAIKDFNEVIKLNPNNEKAYLARGIAKSYLEEYEEAIKDFNEVIKLNPNNEK 260

Query: 348 AELSHIYSLRDAAIAQM------KVCERYNIKKKVSPRSQNITKNEKLAIKQLRENNDII 401
           A L+         IA++      +V E +N   +++P ++N   N  +A  +L +  + +
Sbjct: 261 AYLAR-------GIAKIESGKHEEVIEDFNKAIELNPNNENAYFNRGIAKAKLEKYEEAV 313

Query: 402 I--RPADKGGKTVVMDKADYTQKMTSILNSNDYEIIPGDPTKTIEESEKYGNLENESGQK 459
           +    A K  K    +K  +++ +T +                  + EKY         +
Sbjct: 314 VDFNKAIKLNKN--NEKTYFSRGITKV------------------KLEKY---------E 344

Query: 460 HAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVA 519
            A  DF KA         ++ +   +Y+ RG +   FG+Y+EA+ + +K I LN N++ A
Sbjct: 345 EAIEDFNKAIG-------LNKSYNKAYFNRGILKINFGKYKEAINDFNKAIGLNKNYNKA 397

Query: 520 RAQRHFVWTS 529
              R  + T+
Sbjct: 398 YFNRGILKTN 407



 Score = 83.2 bits (204), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 70/272 (25%), Positives = 125/272 (45%), Gaps = 15/272 (5%)

Query: 75  EDYLTAIRHCTEEIESTSSNHTKALARLLRATVYIFTSQSTKAIEDLTQLVEDTSVDPKI 134
           E Y  AI+   E I+  + N     A   R    +   +  +AIED  + ++  S + + 
Sbjct: 137 EKYEEAIKDFNEVIKLNTKNEE---AYFFRGLAKVKLEKDKEAIEDFNKSIKLNSKNEEA 193

Query: 135 KVNAHIKRAVVHLHAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNL 194
             N  I +  + +     + +A  D +E  K++PN   +Y  RG       +YEEA+++ 
Sbjct: 194 YFNRGIAKTKLEI-----YEEAIKDFNEVIKLNPNNEKAYLARGIAKSYLEEYEEAIKDF 248

Query: 195 DKTIALNPNFHVARAQRHFVVHKMIVPGDRERVEQSLKEFRNFVDTHSNVVEACTLFAQV 254
           ++ I LNPN   A   R       I  G  E V   +++F   ++ + N   A       
Sbjct: 249 NEVIKLNPNNEKAYLARGIA---KIESGKHEEV---IEDFNKAIELNPNNENAYFNRGIA 302

Query: 255 LVDQEDFDGAEEYFNRSIRVDPENASLYVHRAMLMLQARGNVDEAIKLIEKAISIDKSCM 314
               E ++ A   FN++I+++  N   Y  R +  ++     +EAI+   KAI ++KS  
Sbjct: 303 KAKLEKYEEAVVDFNKAIKLNKNNEKTYFSRGITKVKLEK-YEEAIEDFNKAIGLNKSYN 361

Query: 315 FAYETLGTIEVQRGRLEEAVKCFNKALPLARD 346
            AY   G +++  G+ +EA+  FNKA+ L ++
Sbjct: 362 KAYFNRGILKINFGKYKEAINDFNKAIGLNKN 393



 Score = 70.1 bits (170), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 58/223 (26%), Positives = 108/223 (48%), Gaps = 16/223 (7%)

Query: 117 AIEDLTQLVEDTSVDPKIKVNAHIKRAVVHLHAASDFTKAFADLDEAEKVDPNVADSYYQ 176
           AI+D  ++++    + K    A++ R +   +   ++ +A  D +E  K++PN   +Y  
Sbjct: 210 AIKDFNEVIKLNPNNEK----AYLARGIAKSYL-EEYEEAIKDFNEVIKLNPNNEKAYLA 264

Query: 177 RGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQRHFVVHKMIVPGDRERVEQSLKEFRN 236
           RG      G++EE + + +K I LNPN   A   R     K+      E+ E+++ +F  
Sbjct: 265 RGIAKIESGKHEEVIEDFNKAIELNPNNENAYFNRGIAKAKL------EKYEEAVVDFNK 318

Query: 237 FVDTHSNVVEACTLFAQVL--VDQEDFDGAEEYFNRSIRVDPENASLYVHRAMLMLQARG 294
            +  + N     T F++ +  V  E ++ A E FN++I ++      Y +R +L +   G
Sbjct: 319 AIKLNKN--NEKTYFSRGITKVKLEKYEEAIEDFNKAIGLNKSYNKAYFNRGILKINF-G 375

Query: 295 NVDEAIKLIEKAISIDKSCMFAYETLGTIEVQRGRLEEAVKCF 337
              EAI    KAI ++K+   AY   G ++   G+ +EA+  F
Sbjct: 376 KYKEAINDFNKAIGLNKNYNKAYFNRGILKTNFGKYKEAINDF 418


>gi|254417606|ref|ZP_05031343.1| Tetratricopeptide repeat family [Coleofasciculus chthonoplastes PCC
           7420]
 gi|196175628|gb|EDX70655.1| Tetratricopeptide repeat family [Coleofasciculus chthonoplastes PCC
           7420]
          Length = 909

 Score = 87.8 bits (216), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 82/365 (22%), Positives = 165/365 (45%), Gaps = 44/365 (12%)

Query: 153 FTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQRH 212
           + +A A  D+A  ++P+  +++  RG       +YEEA+ + DK +ALNP+ + A   R 
Sbjct: 410 YEEAIASYDKALALNPDNYEAWNNRGNTLRNLERYEEAIASYDKALALNPDNYEAWNNRG 469

Query: 213 FVVHKMIVPGDRERVEQSLKEFRNFVDTHSNVVEACTLFAQVLVDQEDFDGAEEYFNRSI 272
             +      G+ ER E+++  F   +D + +   A       L + E ++ A   +++++
Sbjct: 470 GAL------GNLERYEEAIASFDQAIDLNPDYSSAWNNRGNTLGNLERYEEAIASYDQAL 523

Query: 273 RVDPENASLYVHRAMLMLQARGNVDEAIKLIEKAISIDKSCMFAYETLGTIEVQRGRLEE 332
            ++P+++S + +R +  L      +EAI   ++A++++      +   G       R EE
Sbjct: 524 ALNPDDSSAWYNRGV-TLDDLERYEEAIVSYDQALALNPDDSSVWNNHGNTLGNLDRYEE 582

Query: 333 AVKCFNKALPLARDEAEL--SHIYSLRDAAIAQMKVCERYNIKKKVSPRSQNITKNEKLA 390
           A+  +++A+ L  D++ +  +H  +L D    +  +   Y+    ++P   N+  N  + 
Sbjct: 583 AIASYDQAIALNPDDSSVWNNHGVTLDDLERYEEAIAS-YDQAIALNPDDSNVWNNRGVT 641

Query: 391 IKQLRENNDIIIRPADKGGKTVVMDKADYTQKMTSILNSNDYEIIPGDPTKTIEESEKYG 450
           +  L++    I               A Y Q +T  LN       P D +          
Sbjct: 642 LGNLKKYEKAI---------------ASYDQAIT--LN-------PDDSSAWFMRGIALR 677

Query: 451 NLENESGQKHAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTI 510
           NLE           + +A A  D+A  ++P+   +++ RG       +YEEA+ + D+ I
Sbjct: 678 NLEK----------YEEAIASYDQAIALNPDFYQAWFNRGNTLRNLERYEEAIASYDQAI 727

Query: 511 ALNPN 515
           ALNP+
Sbjct: 728 ALNPD 732



 Score = 85.5 bits (210), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 115/543 (21%), Positives = 224/543 (41%), Gaps = 90/543 (16%)

Query: 50  ELTNGDTNESHELDLLSKAKRAFEHEDYLTAIRHCTEEIESTSSNHTKALARLLRATVYI 109
           +L+ GD  E  +L    +  +  E +D L          ES++S  T A        ++ 
Sbjct: 185 QLSIGDLQEYLKLTPEERVIKTLELDDLLD---------ESSNSPETTAKLYFEHGLLFF 235

Query: 110 FTSQSTKAIEDLTQLVEDTSVDPKIKVNAHIKRAVVHLHAASDFTKAFADLDEAEKVDPN 169
             +Q  KA+    Q +   +++P     A  +R +V L     + +A A  D+A  ++P+
Sbjct: 236 SGNQDEKALASFDQAI---ALNPD-DYQAWNRRGIV-LRRLERYEEAIASFDQAITLNPD 290

Query: 170 VADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQRHFVVHKM----------- 218
              ++  RG +     +YEEA+ + D+ IALNP+ + A   R   +  +           
Sbjct: 291 YYKAWNGRGIVLINLKRYEEAIASYDQAIALNPDDYQAWNNRGVALGNLERYEEAIASYD 350

Query: 219 -----------------IVPGDRERVEQSLKEFRNFVDTHSNVVEACTLFAQVLVDQEDF 261
                            +  G+ ER E+++  +   +  + +  EA       L + E +
Sbjct: 351 QAIALNPDDYQAWNNRGVALGNLERYEEAIASYDQAIALNPDNYEAWNNRGNTLRNLERY 410

Query: 262 DGAEEYFNRSIRVDPENASLYVHRAMLMLQARGNVDEAIKLIEKAISIDKSCMFAYETLG 321
           + A   +++++ ++P+N   + +R    L+     +EAI   +KA++++     A+   G
Sbjct: 411 EEAIASYDKALALNPDNYEAWNNRGN-TLRNLERYEEAIASYDKALALNPDNYEAWNNRG 469

Query: 322 TIEVQRGRLEEAVKCFNKALPLARDEAELSHIYSLRDAAIAQMKVCER----YNIKKKVS 377
                  R EEA+  F++A+ L  D    S  ++ R   +  ++  E     Y+    ++
Sbjct: 470 GALGNLERYEEAIASFDQAIDLNPD---YSSAWNNRGNTLGNLERYEEAIASYDQALALN 526

Query: 378 PRSQNITKNEKLAIKQLRENNDIII--------RPADKG-----GKTVV-MDK-----AD 418
           P   +   N  + +  L    + I+         P D       G T+  +D+     A 
Sbjct: 527 PDDSSAWYNRGVTLDDLERYEEAIVSYDQALALNPDDSSVWNNHGNTLGNLDRYEEAIAS 586

Query: 419 YTQKMTSILNSNDYEIIPGDPTKTIEESEKY-----------------GNLENESGQKHA 461
           Y Q +   LN +D  +   +   T+++ E+Y                  N+ N  G    
Sbjct: 587 YDQAIA--LNPDDSSVW-NNHGVTLDDLERYEEAIASYDQAIALNPDDSNVWNNRGVTLG 643

Query: 462 -ASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVAR 520
               + KA A  D+A  ++P+ + +++ RG       +YEEA+ + D+ IALNP+F+ A 
Sbjct: 644 NLKKYEKAIASYDQAITLNPDDSSAWFMRGIALRNLEKYEEAIASYDQAIALNPDFYQAW 703

Query: 521 AQR 523
             R
Sbjct: 704 FNR 706



 Score = 64.3 bits (155), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 49/220 (22%), Positives = 105/220 (47%), Gaps = 8/220 (3%)

Query: 145 VHLHAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNF 204
           V L     + KA A  D+A  ++P+ + +++ RG       +YEEA+ + D+ IALNP+F
Sbjct: 640 VTLGNLKKYEKAIASYDQAITLNPDDSSAWFMRGIALRNLEKYEEAIASYDQAIALNPDF 699

Query: 205 HVARAQRHFVVHKMIVPGDRERVEQSLKEFRNFVDTHSNVVEACTLFAQVLVDQEDFDGA 264
           + A   R   +  +      ER E+++  +   +  + +   A  +    L + E ++ A
Sbjct: 700 YQAWFNRGNTLRNL------ERYEEAIASYDQAIALNPDDSSAWFMRGIALGNLERYEEA 753

Query: 265 EEYFNRSIRVDPENASLYVHRAMLMLQARGNVDEAIKLIEKAISIDKSCMFAYETLGTIE 324
              FN++I + P++++ + +   L L  +    +A   + +++ I+ +  +    LG + 
Sbjct: 754 IASFNQAIALTPDDSTAWNNLGFLYLM-QNQPQKAKSSLNRSLQINANFFYPLFNLGLVH 812

Query: 325 VQRGRLEEAVKCFNKALPLARDEAELSHIY-SLRDAAIAQ 363
           V    ++EA +   K+L   + +     +Y +L   A+ Q
Sbjct: 813 VIDNNIKEAKRLIQKSLTCCQGDDTQEQLYIALSTIALGQ 852


>gi|425442756|ref|ZP_18822993.1| Tetratricopeptide repeat protein (fragment) [Microcystis aeruginosa
           PCC 9717]
 gi|389716117|emb|CCH99609.1| Tetratricopeptide repeat protein (fragment) [Microcystis aeruginosa
           PCC 9717]
          Length = 492

 Score = 87.8 bits (216), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 106/435 (24%), Positives = 193/435 (44%), Gaps = 52/435 (11%)

Query: 97  KALARLLRATVYIFTSQSTKAIEDLTQLVEDTSVDPKIKVNAHIKRAVVHLHAASDFTKA 156
           +AL  ++RA  Y    +   A++D  + +E   ++P   + A+  RA+ H  +   +  A
Sbjct: 99  RALWYVIRAKYYFLQQKYELALDDHNKAIE---LNPNYAM-AYSVRAL-HYSSQQKYDLA 153

Query: 157 FADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQRHFVVH 216
             D ++A +++PN    Y  RG  Y L  +Y+ AL + +K I +NPN   A   R  +  
Sbjct: 154 LDDYNKAIELNPNYGLYYRGRGLNYLLQQKYDLALADFNKAIDINPNDAGAYNNRGNLYS 213

Query: 217 KMIVPGDRERVEQSLKEFRNFVDTHSNVVEACTLFAQVLVDQEDFDGAEEYFNRSIRVDP 276
                  +++ + +L +F   +D + N  +A      +   Q+ ++ A   +N++I ++P
Sbjct: 214 Y------QQKYDLALSDFNKAIDLNRNFAKAYENRGNLYRRQQKYELALADYNKAIDINP 267

Query: 277 ENASLYVHRAMLMLQARGNVDEAIKLIEKAISIDKSCMF-AYETLGTIEVQRGRLEEAVK 335
            +A  Y  R  L    +   + A+    KAI I+   +F AY   G    ++ + + A+ 
Sbjct: 268 NDAGAYASRGNLYSDLQ-KYELALADYNKAIDINSDDVFSAYFYRGIFYHRQQKYDLALA 326

Query: 336 CFNKALPLARDEAELSHIYSLRDAAIAQMKVCERYNIKKKVSPRSQNITKNEKLAIKQLR 395
             NKA+ L    +  SH Y +R   + + K  E+Y +   ++  S+ I  +   A     
Sbjct: 327 DLNKAIEL---NSNFSHFYVVR-GILHENK--EKYEL--ALADYSKAIELDSNYA----- 373

Query: 396 ENNDIIIRPADKGGKTVVMDKADYTQKMTSILNSNDYEIIPGDPTKTIEESEKYGNLENE 455
             N    R     G+   + K               Y++   D +K IE +  Y      
Sbjct: 374 --NAYYNR-----GELYRLQKK--------------YDLALADYSKAIEINPNYAYAYYN 412

Query: 456 SGQKHAASDFTK---AFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIAL 512
            G  +  SD  K   A AD  +A  ++PN AD+Y  RG +Y    +Y+ AL + ++ I +
Sbjct: 413 RGNLY--SDLQKYELALADYSKAIDINPNYADAYNNRGVVYYNLQKYDLALADYNQAIRI 470

Query: 513 NPNFHVARAQRHFVW 527
           NPN+  A   R  ++
Sbjct: 471 NPNYAQAYYNRGLLY 485



 Score = 87.0 bits (214), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 96/423 (22%), Positives = 178/423 (42%), Gaps = 70/423 (16%)

Query: 149 AASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPN--FHV 206
           A  ++ +A   +++A  + PN   SY  +  +     +Y+E L  +++ I L P   ++V
Sbjct: 45  ARENYEQALTVINQAISLFPNSPKSYIMKESVLDSLERYDEGLAAINQAIDLAPRALWYV 104

Query: 207 ARAQRHFVVHKMIVPGDRERVEQSLKEFRNFVDTHSNVVEACTLFAQVLVDQEDFDGAEE 266
            RA+ +F+         +++ E +L +    ++ + N   A ++ A     Q+ +D A +
Sbjct: 105 IRAKYYFL---------QQKYELALDDHNKAIELNPNYAMAYSVRALHYSSQQKYDLALD 155

Query: 267 YFNRSIRVDPENASLYVHRAM-LMLQARGNVDEAIKLIEKAISIDKSCMFAYETLGTIEV 325
            +N++I ++P     Y  R +  +LQ +   D A+    KAI I+ +   AY   G +  
Sbjct: 156 DYNKAIELNPNYGLYYRGRGLNYLLQQK--YDLALADFNKAIDINPNDAGAYNNRGNLYS 213

Query: 326 QRGRLEEAVKCFNKALPLARDEAELSHIYSLRDAAIAQMKVCERYNIKKKVSPRSQNITK 385
            + + + A+  FNKA+ L R                         N  K    R     +
Sbjct: 214 YQQKYDLALSDFNKAIDLNR-------------------------NFAKAYENRGNLYRR 248

Query: 386 NEKLAIKQLRENNDIIIRPADKGG-----------KTVVMDKADYTQKMTSILNSND--- 431
            +K  +     N  I I P D G            +   +  ADY + +   +NS+D   
Sbjct: 249 QQKYELALADYNKAIDINPNDAGAYASRGNLYSDLQKYELALADYNKAID--INSDDVFS 306

Query: 432 --------------YEIIPGDPTKTIEESEKYGNLENESGQKHAASD-FTKAFADLDEAE 476
                         Y++   D  K IE +  + +     G  H   + +  A AD  +A 
Sbjct: 307 AYFYRGIFYHRQQKYDLALADLNKAIELNSNFSHFYVVRGILHENKEKYELALADYSKAI 366

Query: 477 KVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQRHFVWTSTLAELMA 536
           ++D N A++YY RG++Y L  +Y+ AL +  K I +NPN+  A   R  +++      +A
Sbjct: 367 ELDSNYANAYYNRGELYRLQKKYDLALADYSKAIEINPNYAYAYYNRGNLYSDLQKYELA 426

Query: 537 FSD 539
            +D
Sbjct: 427 LAD 429



 Score = 86.3 bits (212), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 102/429 (23%), Positives = 196/429 (45%), Gaps = 28/429 (6%)

Query: 121 LTQLVEDTSVDPKIKVNAHIKRAVVHLHAASDFTKAFADLDEAEKVDPNVADSYYQRGQI 180
           LT + +  S+ P    +  +K +V  L +   + +  A +++A  + P  A  Y  R + 
Sbjct: 53  LTVINQAISLFPNSPKSYIMKESV--LDSLERYDEGLAAINQAIDLAPR-ALWYVIRAKY 109

Query: 181 YCLFGQYEEALRNLDKTIALNPNFHVARAQRHFVVHKMIVPGDRERVEQSLKEFRNFVDT 240
           Y L  +YE AL + +K I LNPN+ +A + R   +H       +++ + +L ++   ++ 
Sbjct: 110 YFLQQKYELALDDHNKAIELNPNYAMAYSVR--ALHY----SSQQKYDLALDDYNKAIEL 163

Query: 241 HSNVVEACTLFAQVLVDQEDFDGAEEYFNRSIRVDPENASLYVHRAMLMLQARGNVDEAI 300
           + N            + Q+ +D A   FN++I ++P +A  Y +R  L    +   D A+
Sbjct: 164 NPNYGLYYRGRGLNYLLQQKYDLALADFNKAIDINPNDAGAYNNRGNLY-SYQQKYDLAL 222

Query: 301 KLIEKAISIDKSCMFAYETLGTIEVQRGRLEEAVKCFNKALPLARDEAELSHIYSLRDAA 360
               KAI ++++   AYE  G +  ++ + E A+  +NKA+ +  ++A     Y+ R   
Sbjct: 223 SDFNKAIDLNRNFAKAYENRGNLYRRQQKYELALADYNKAIDINPNDAG---AYASRGNL 279

Query: 361 IAQMKVCERYNIKKKVSPRSQNITKNEKLAIKQLR-------ENNDIIIRPADKGGKTVV 413
            + +   ++Y +      ++ +I  ++  +    R       +  D+ +  AD      +
Sbjct: 280 YSDL---QKYELALADYNKAIDINSDDVFSAYFYRGIFYHRQQKYDLAL--ADLNKAIEL 334

Query: 414 MDKADYTQKMTSILNSND--YEIIPGDPTKTIEESEKYGNLENESGQKH-AASDFTKAFA 470
                +   +  IL+ N   YE+   D +K IE    Y N     G+ +     +  A A
Sbjct: 335 NSNFSHFYVVRGILHENKEKYELALADYSKAIELDSNYANAYYNRGELYRLQKKYDLALA 394

Query: 471 DLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQRHFVWTST 530
           D  +A +++PN A +YY RG +Y    +YE AL +  K I +NPN+  A   R  V+ + 
Sbjct: 395 DYSKAIEINPNYAYAYYNRGNLYSDLQKYELALADYSKAIDINPNYADAYNNRGVVYYNL 454

Query: 531 LAELMAFSD 539
               +A +D
Sbjct: 455 QKYDLALAD 463



 Score = 50.1 bits (118), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 40/147 (27%), Positives = 70/147 (47%), Gaps = 14/147 (9%)

Query: 75  EDYLTAIRHCTEEIESTSSNHTKALARLLRATVYIFTSQSTKAIEDLTQLVEDTSVDPKI 134
           E Y  A+   ++ IE   SN+  A     R  +Y    +   A+ D ++ +E   ++P  
Sbjct: 353 EKYELALADYSKAIE-LDSNYANAYYN--RGELYRLQKKYDLALADYSKAIE---INPNY 406

Query: 135 KVNAHIKRAVVHLHAASDFTK---AFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEAL 191
              A+  R  ++    SD  K   A AD  +A  ++PN AD+Y  RG +Y    +Y+ AL
Sbjct: 407 AY-AYYNRGNLY----SDLQKYELALADYSKAIDINPNYADAYNNRGVVYYNLQKYDLAL 461

Query: 192 RNLDKTIALNPNFHVARAQRHFVVHKM 218
            + ++ I +NPN+  A   R  + + +
Sbjct: 462 ADYNQAIRINPNYAQAYYNRGLLYYNL 488


>gi|17228384|ref|NP_484932.1| hypothetical protein all0889 [Nostoc sp. PCC 7120]
 gi|17130234|dbj|BAB72846.1| all0889 [Nostoc sp. PCC 7120]
          Length = 605

 Score = 87.8 bits (216), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 119/527 (22%), Positives = 213/527 (40%), Gaps = 124/527 (23%)

Query: 25  QFIKTYLKSFPNDPILQPD---GLSNGV---ELTNGDTNESHE--LDLLSKAKRAFEHED 76
           Q I  Y+ +   DP+L  +    ++N      L N D     E  +DL    ++A +   
Sbjct: 123 QAIANYISTIEFDPLLASNINEDIANAYYYRGLNNNDQGNYQEAIIDL----QQALQWHP 178

Query: 77  YLTA-------IRHCTEEIESTSSNHTKAL--------ARLLRATVYIFTSQSTKAIEDL 121
           Y  A       I +   E     ++H +A+        A   R   +       KAI D 
Sbjct: 179 YFAAAYSIRGNIYYKLGEYRQAIADHERAVQLDPNLAEAYQNRGNAHYALGAYQKAIADY 238

Query: 122 TQLVEDTSVDPKIKVNAHIKRAVV--HLHAASDFTKAFADLDEAEKVDPNVADSYYQRGQ 179
            + +E   ++P  +V A+  R ++  +LH   ++ +AFAD ++    +PN A +YYQRG 
Sbjct: 239 NRTLE---INPH-QVGAYYNRGLISFYLH---EYQQAFADFNQVLNFNPNDAQAYYQRGL 291

Query: 180 IYCLFGQYEEALRNLDKTIALNPNFHVARAQRHFVVHKMIVPGDRERVEQSLKEFRNFVD 239
           IY  +  Y+ AL + ++++ LN                 +V G R  + + L ++ + + 
Sbjct: 292 IYEAWQDYQSALADYNQSLQLNSEL-------------AVVYGVRANIYRHLGDYPSALA 338

Query: 240 THSNVVEACTLFAQVLVDQE-------DFDGAEEYFNRSIRVDPENASLYVHRAMLMLQA 292
             + ++E    FA    D+        D+ GA   +N++++++P  A  Y  RA+     
Sbjct: 339 DGNRLLELQPNFAAGYCDRATSRRCLGDYRGAIADYNQALQINPNIAEAYYGRAIAHEAL 398

Query: 293 RGNVDEAIKLIEKAISIDKSCMFAYETLGTIEVQRGRLEEAVKCFNKALPLARDEAELSH 352
           R  +  AI    ++I I      AY   G    Q G  + AV  +N+AL +         
Sbjct: 399 RDFIG-AIADYTQSIRISPDFAPAYCNRGNARRQLGDTKGAVTDYNQALTI--------- 448

Query: 353 IYSLRDAAIAQMKVCERYNIKKKVSPRSQNITKNEKLAIKQLRENNDIIIRPADKGGKTV 412
                       ++ E Y  +  +    QN     + AI                     
Sbjct: 449 ----------NPQLSEAYYNRGSLHYDQQNY----RSAI--------------------- 473

Query: 413 VMDKADYTQKMTSILNSNDYEIIPGDPTKTIEESEKYGNLENESGQKHAASDFTKAFADL 472
               ADYTQ +         E+ P        ES +Y    + +  ++A  D+  A AD 
Sbjct: 474 ----ADYTQAL---------ELQP--------ESARY--YSDRAHARYALQDYQGAVADY 510

Query: 473 DEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVA 519
            ++  ++P  A+ +Y RG+ + L G  EEAL +L++ +  +P++  A
Sbjct: 511 TQSIAINPGYAEDWYNRGRSHLLLGYLEEALADLNQALKFHPHWASA 557



 Score = 76.6 bits (187), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 83/409 (20%), Positives = 169/409 (41%), Gaps = 66/409 (16%)

Query: 134 IKVNAHIKRAVVHL----HAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEE 189
           +++N +  +A  H     +  +DFT A AD D+A +++P  A+ YY RG  Y   G Y++
Sbjct: 64  VEINPNYAQAYYHRANARYCLADFTAAIADYDQALQINPTFAEYYYCRGNAYLAQGDYDQ 123

Query: 190 ALRNLDKTIALNP------NFHVARAQRHFVVHKMIVPGDRERVEQSLKEFRNFVDTHSN 243
           A+ N   TI  +P      N  +A A      ++ +   D+   ++++ + +  +  H  
Sbjct: 124 AIANYISTIEFDPLLASNINEDIANA----YYYRGLNNNDQGNYQEAIIDLQQALQWHPY 179

Query: 244 VVEACTLFAQVLVDQEDFDGAEEYFNRSIRVDPENASLYVHRAMLMLQARGNVDEAIKLI 303
              A ++   +     ++  A     R++++DP  A  Y        Q RGN   A+   
Sbjct: 180 FAAAYSIRGNIYYKLGEYRQAIADHERAVQLDPNLAEAY--------QNRGNAHYALGAY 231

Query: 304 EKAIS-------IDKSCMFAYETLGTIEVQRGRLEEAVKCFNKALPLARDEAELSHIYSL 356
           +KAI+       I+   + AY   G I       ++A   FN+ L    ++A+  +   L
Sbjct: 232 QKAIADYNRTLEINPHQVGAYYNRGLISFYLHEYQQAFADFNQVLNFNPNDAQAYYQRGL 291

Query: 357 RDAAIAQMKVCERY-NIKKKVSPRSQNITKNEKLAIKQLRENNDIIIRPADKGGKTVVMD 415
                    + E + + +  ++  +Q++  N +LA+                        
Sbjct: 292 ---------IYEAWQDYQSALADYNQSLQLNSELAVV----------------------- 319

Query: 416 KADYTQKMTSILNSNDYEIIPGDPTKTIEESEKY-GNLENESGQKHAASDFTKAFADLDE 474
              Y  +     +  DY     D  + +E    +     + +  +    D+  A AD ++
Sbjct: 320 ---YGVRANIYRHLGDYPSALADGNRLLELQPNFAAGYCDRATSRRCLGDYRGAIADYNQ 376

Query: 475 AEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQR 523
           A +++PN+A++YY R   +     +  A+ +  ++I ++P+F  A   R
Sbjct: 377 ALQINPNIAEAYYGRAIAHEALRDFIGAIADYTQSIRISPDFAPAYCNR 425



 Score = 62.0 bits (149), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 88/397 (22%), Positives = 148/397 (37%), Gaps = 78/397 (19%)

Query: 133 KIKVNAHIKRAVVHLHAASDFTKAFADLDEAEKVDPNVADSYYQRGQI-YCLFGQYEEAL 191
           +I    + KR +       D+  A A  + A +++PN A +YY R    YCL   +  A+
Sbjct: 33  RIDAETYCKRGITFSRELKDYQGAIAFFNLAVEINPNYAQAYYHRANARYCL-ADFTAAI 91

Query: 192 RNLDKTIALNPNFHVARAQRHFV-VHKMIVPGDRERVEQSLKEFRNFVDTHSNVVEACTL 250
            + D+ + +NP F    A+ ++   +  +  GD ++         N++ T    +E    
Sbjct: 92  ADYDQALQINPTF----AEYYYCRGNAYLAQGDYDQA------IANYIST----IE---- 133

Query: 251 FAQVLVDQEDFDGAEEYFNRSIRVDPENASLYVHRAMLMLQARGNVDEAIKLIEKAISID 310
           F  +L    + D A  Y+ R +  + +                GN  EAI  +++A+   
Sbjct: 134 FDPLLASNINEDIANAYYYRGLNNNDQ----------------GNYQEAIIDLQQALQWH 177

Query: 311 KSCMFAYETLGTIEVQRGRLEEAVKCFNKALPLARDEAELSHIYSLRD----AAIAQMKV 366
                AY   G I  + G   +A+    +A+ L   +  L+  Y  R     A  A  K 
Sbjct: 178 PYFAAAYSIRGNIYYKLGEYRQAIADHERAVQL---DPNLAEAYQNRGNAHYALGAYQKA 234

Query: 367 CERYNIKKKVSPRSQNITKNEKLAIKQLRENNDIIIRPADKGGKTVVMDKADYTQKMTSI 426
              YN   +++P       N  L    L E                    AD+ Q    +
Sbjct: 235 IADYNRTLEINPHQVGAYYNRGLISFYLHEYQQAF---------------ADFNQ----V 275

Query: 427 LNSNDYEIIPGDPTKTIEESEKYGNLENESGQKHAASDFTKAFADLDEAEKVDPNVADSY 486
           LN N     P D     +    Y           A  D+  A AD +++ +++  +A  Y
Sbjct: 276 LNFN-----PNDAQAYYQRGLIY----------EAWQDYQSALADYNQSLQLNSELAVVY 320

Query: 487 YQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQR 523
             R  IY   G Y  AL + ++ + L PNF      R
Sbjct: 321 GVRANIYRHLGDYPSALADGNRLLELQPNFAAGYCDR 357



 Score = 55.8 bits (133), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 54/237 (22%), Positives = 101/237 (42%), Gaps = 22/237 (9%)

Query: 117 AIEDLTQLVEDTSVDPKIKVNAHIKRAVVHLHAASDFTKAFADLDEAEKVDPNVADSYYQ 176
           AI D  Q ++   ++P I   A+  RA+ H  A  DF  A AD  ++ ++ P+ A +Y  
Sbjct: 370 AIADYNQALQ---INPNI-AEAYYGRAIAH-EALRDFIGAIADYTQSIRISPDFAPAYCN 424

Query: 177 RGQIYCLFGQYEEALRNLDKTIALNPNFHVA---RAQRHFVVHKMIVPGDRERVEQSLKE 233
           RG      G  + A+ + ++ + +NP    A   R   H+         D++    ++ +
Sbjct: 425 RGNARRQLGDTKGAVTDYNQALTINPQLSEAYYNRGSLHY---------DQQNYRSAIAD 475

Query: 234 FRNFVDTHSNVVEACTLFAQVLVDQEDFDGAEEYFNRSIRVDPENASLYVHRAM--LMLQ 291
           +   ++         +  A      +D+ GA   + +SI ++P  A  + +R    L+L 
Sbjct: 476 YTQALELQPESARYYSDRAHARYALQDYQGAVADYTQSIAINPGYAEDWYNRGRSHLLL- 534

Query: 292 ARGNVDEAIKLIEKAISIDKSCMFAYETLGTIEVQRGRLEEAVKCFNKALPLARDEA 348
             G ++EA+  + +A+        AY     I   RG  + A+  F K+  L   E 
Sbjct: 535 --GYLEEALADLNQALKFHPHWASAYLLRADILRNRGDYQAAIADFQKSADLYSQEG 589



 Score = 46.6 bits (109), Expect = 0.036,   Method: Compositional matrix adjust.
 Identities = 58/288 (20%), Positives = 118/288 (40%), Gaps = 40/288 (13%)

Query: 259 EDFDGAEEYFNRSIRVDPENASLYVHRAMLMLQARGNVDEAIKLIEKAISIDKSCMFAYE 318
           +D+ GA  +FN ++ ++P  A  Y HRA        +   AI   ++A+ I+ +    Y 
Sbjct: 51  KDYQGAIAFFNLAVEINPNYAQAYYHRANARY-CLADFTAAIADYDQALQINPTFAEYYY 109

Query: 319 TLGTIEVQRGRLEEAVKCFNKAL---PL--ARDEAELSHIYSLRDAAIAQMKVCERYNIK 373
             G   + +G  ++A+  +   +   PL  +    ++++ Y  R      +   ++ N +
Sbjct: 110 CRGNAYLAQGDYDQAIANYISTIEFDPLLASNINEDIANAYYYRG-----LNNNDQGNYQ 164

Query: 374 KKVSPRSQNITKNEKLAIK-QLRENNDIIIRPADKGGKTVVMDKADYTQKMTSILNSNDY 432
           + +    Q +  +   A    +R N              +     +Y Q +       D+
Sbjct: 165 EAIIDLQQALQWHPYFAAAYSIRGN--------------IYYKLGEYRQAIA------DH 204

Query: 433 E-IIPGDPTKTIEESEKYGNLENESGQKHAASDFTKAFADLDEAEKVDPNVADSYYQRGQ 491
           E  +  DP      +E Y   +N     +A   + KA AD +   +++P+   +YY RG 
Sbjct: 205 ERAVQLDPNL----AEAY---QNRGNAHYALGAYQKAIADYNRTLEINPHQVGAYYNRGL 257

Query: 492 IYCLFGQYEEALRNLDKTIALNPNFHVARAQRHFVWTSTLAELMAFSD 539
           I     +Y++A  + ++ +  NPN   A  QR  ++ +      A +D
Sbjct: 258 ISFYLHEYQQAFADFNQVLNFNPNDAQAYYQRGLIYEAWQDYQSALAD 305



 Score = 44.3 bits (103), Expect = 0.15,   Method: Compositional matrix adjust.
 Identities = 33/140 (23%), Positives = 66/140 (47%), Gaps = 13/140 (9%)

Query: 104 RATVYIFTSQSTKAIEDLTQLVEDTSVDPKIKVN-AHIKRAVVHLHAASDFTKAFADLDE 162
           R +++        AI D TQ +E      +   + AH + A+       D+  A AD  +
Sbjct: 459 RGSLHYDQQNYRSAIADYTQALELQPESARYYSDRAHARYAL------QDYQGAVADYTQ 512

Query: 163 AEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQRHFVVHKMIVPG 222
           +  ++P  A+ +Y RG+ + L G  EEAL +L++ +  +P++  A   R  ++       
Sbjct: 513 SIAINPGYAEDWYNRGRSHLLLGYLEEALADLNQALKFHPHWASAYLLRADILR------ 566

Query: 223 DRERVEQSLKEFRNFVDTHS 242
           +R   + ++ +F+   D +S
Sbjct: 567 NRGDYQAAIADFQKSADLYS 586


>gi|440703720|ref|ZP_20884640.1| tetratricopeptide repeat protein [Streptomyces turgidiscabies Car8]
 gi|440274727|gb|ELP63235.1| tetratricopeptide repeat protein [Streptomyces turgidiscabies Car8]
          Length = 747

 Score = 87.4 bits (215), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 101/433 (23%), Positives = 186/433 (42%), Gaps = 48/433 (11%)

Query: 97  KALARLLRATVYIFTSQSTKAIEDLTQLVEDTSVDPKIKVNAHIKRAVVHLHAASDFTKA 156
           +A+AR+LR      +    +A+ +  Q +   ++DP+++  A+  R V       D+  A
Sbjct: 188 QAVARMLRGRELRLSGAYERALGEYEQAL---ALDPELE-RAYYGRGVTRAEQ-RDYAAA 242

Query: 157 FADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQRHFVVH 216
             DLD A+++ P+ A   + RG  + + G +EEA+R+LD+ +AL P+   A A R    H
Sbjct: 243 ITDLDRADELAPDTARVLFVRGDYHRILGHHEEAVRDLDRAVALGPDLAGAWASRGVTRH 302

Query: 217 KMIVPGDRERVEQSLKEFRNFVDTHSNVVEACTLFAQVLVDQEDFDGAEEYFNRSIRVDP 276
                GD   +EQ+L +    ++     V A    A+V   +E+ D      +R++ + P
Sbjct: 303 GT---GD---IEQALADLDRALELDPEHVWALVRRARVHRSREEHDRQFADLDRAVALGP 356

Query: 277 ENASLYVHRAMLMLQARGNVDEAIKLIEKAISIDKSCMFAYETLGTIEVQRGRLEEAVKC 336
           E A +   R    L+  G   EA+   ++A+ +D +   AY + G    + GR E  +  
Sbjct: 357 ELAWVSCQRGD-ALRVAGRDTEALADYDRALELDPAYASAYASRGVSRSRLGRHEGGLAD 415

Query: 337 FNKALPLARDEAELSHIYSLRDAAIAQMKVCERYNIKKKVSPRSQNITKNEKLAIKQLRE 396
            ++AL L       ++ ++L   ++   K  E Y    + + R+  +      A+    E
Sbjct: 416 LDRALAL-----HPAYPWALVQRSVVHRKTDE-YEASYEDADRAVELEPESAWALWNRGE 469

Query: 397 NNDIIIRPADKGGKTVVMDKADYTQKMTSILNSNDYEIIPGDPTKTIEESEKYGNLENES 456
               + R  +     V +D+A       S+   + + +  G     + E   YG      
Sbjct: 470 ALRCLGRFEE---ARVDLDRA------LSLFPGSVWAV--GCRGAVLHELRLYG------ 512

Query: 457 GQKHAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNF 516
                     +A  DLD A  +DP+ A    +R       G+ E+A  +LD+ + +  + 
Sbjct: 513 ----------EALDDLDRAVTLDPDGAWHLMRRIMTLLAVGRPEDARTDLDRYLVIGDDL 562

Query: 517 ---HVARAQRHFV 526
              H   AQ H +
Sbjct: 563 AWAHHTLAQIHLL 575



 Score = 62.0 bits (149), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 75/290 (25%), Positives = 128/290 (44%), Gaps = 48/290 (16%)

Query: 82  RHCTEEIESTSSNHTKAL--------ARLLRATVYIFTSQSTKAIEDLTQLVEDTSVDPK 133
           RH T +IE   ++  +AL        A + RA V+    +  +   DL + V   ++ P+
Sbjct: 301 RHGTGDIEQALADLDRALELDPEHVWALVRRARVHRSREEHDRQFADLDRAV---ALGPE 357

Query: 134 IK-VNAHIKRAVVHLHAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALR 192
           +  V+     A   L  A   T+A AD D A ++DP  A +Y  RG      G++E  L 
Sbjct: 358 LAWVSCQRGDA---LRVAGRDTEALADYDRALELDPAYASAYASRGVSRSRLGRHEGGLA 414

Query: 193 NLDKTIALNPNFHVARAQRHFVVHKMI-------VPGDRERVE-------------QSLK 232
           +LD+ +AL+P +  A  QR  VVH+            DR  VE             ++L+
Sbjct: 415 DLDRALALHPAYPWALVQRS-VVHRKTDEYEASYEDADRA-VELEPESAWALWNRGEALR 472

Query: 233 EFRNFVDTHSNVVEACTLF----------AQVLVDQEDFDGAEEYFNRSIRVDPENASLY 282
               F +   ++  A +LF            VL +   +  A +  +R++ +DP+ A   
Sbjct: 473 CLGRFEEARVDLDRALSLFPGSVWAVGCRGAVLHELRLYGEALDDLDRAVTLDPDGAWHL 532

Query: 283 VHRAMLMLQARGNVDEAIKLIEKAISIDKSCMFAYETLGTIEVQRGRLEE 332
           + R M +L A G  ++A   +++ + I     +A+ TL  I +  GR E+
Sbjct: 533 MRRIMTLL-AVGRPEDARTDLDRYLVIGDDLAWAHHTLAQIHLLDGRTED 581


>gi|220922451|ref|YP_002497753.1| peptidase C14 caspase catalytic subunit p20 [Methylobacterium
           nodulans ORS 2060]
 gi|219947058|gb|ACL57450.1| peptidase C14 caspase catalytic subunit p20 [Methylobacterium
           nodulans ORS 2060]
          Length = 1022

 Score = 87.4 bits (215), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 91/436 (20%), Positives = 178/436 (40%), Gaps = 55/436 (12%)

Query: 116 KAIEDLTQLVEDTSVDPKIKVNAHIKRAVVHLHAASDFTKAFADLDEAEKVDPNVADSYY 175
           +AI D  Q +    +DPK+   A++ R      +  ++ +A AD ++A ++DP    +Y 
Sbjct: 44  RAIADYNQALR---LDPKLTA-AYVNRGFT-FRSKGEYDRAIADYNQALRLDPRSVIAYN 98

Query: 176 QRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQRHFVVHKMIVPGDRERVEQSLKEFR 235
            RG  +   G YE A+ + ++ + L+P   +    R F  H       +   ++++ ++ 
Sbjct: 99  NRGDAFYHKGDYERAIADYNRALQLDPKHPIVYNNRGFAFHG------KGEYDRAIADYN 152

Query: 236 NFVDTHSNVVEACTLFAQVLVDQEDFDGAEEYFNRSIRVDPENASLYVHRAMLMLQARGN 295
             +    N   A          + ++D A   +++++R+DP+ A  Y +R  +  +++G 
Sbjct: 153 QALQLDPNYTFAYNNRGFAFQGKGEYDRAIADYSQALRLDPKYAIAYTNRGDV-FRSKGE 211

Query: 296 VDEAIKLIEKAISIDKSCMFAYETLGTIEVQRGRLEEAVKCFNKALPL-------ARDEA 348
            + AI    +A+  D   + AY   G      G  + A+  + +AL L         + A
Sbjct: 212 YNRAIADYNQALQFDPKPIIAYNNRGLAFQNMGEYDRAISDYTEALRLEPKYVIAVVNRA 271

Query: 349 ELSHIYSLRDAAIAQMKVCERYNIKKKVSPRSQNITKNEKLAIKQLRENNDIIIRPADKG 408
           +   I    D AI        Y+    ++P       N  LA +   E +  I       
Sbjct: 272 DAFRIKGEYDRAIVD------YDQALHLNPNYAIAYNNRGLAFQNKGEYDRAI------- 318

Query: 409 GKTVVMDKADYTQKMT--------------SILNSNDYEIIPGDPTKTIEESEKYGNLEN 454
                   ADY+Q +               +  N  + ++   D  + +  +  Y    N
Sbjct: 319 --------ADYSQALRLDPKYVIAFVNRGDAFRNKGENDVAIADYNQALRLNPSYSTAYN 370

Query: 455 ESGQK-HAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALN 513
             G       ++ +A AD ++A ++DP  A +Y  RG      G+Y+ A+ + ++ + LN
Sbjct: 371 TRGLAFQNKGEYDRAIADYEQAIRLDPKSAIAYNNRGFALQSKGEYDRAITDYNQALQLN 430

Query: 514 PNFHVARAQRHFVWTS 529
           P   +    R FV+ S
Sbjct: 431 PKSAITYTNRGFVFQS 446



 Score = 87.4 bits (215), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 99/452 (21%), Positives = 182/452 (40%), Gaps = 75/452 (16%)

Query: 104 RATVYIFTSQSTKAIEDLTQLVEDTSVDPKIKVNAHIKRAVVHLHAASDFTKAFADLDEA 163
           R   +       +AI D  + ++   +DPK  +  +  R     H   ++ +A AD ++A
Sbjct: 100 RGDAFYHKGDYERAIADYNRALQ---LDPKHPI-VYNNRGFA-FHGKGEYDRAIADYNQA 154

Query: 164 EKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQR------------ 211
            ++DPN   +Y  RG  +   G+Y+ A+ +  + + L+P + +A   R            
Sbjct: 155 LQLDPNYTFAYNNRGFAFQGKGEYDRAIADYSQALRLDPKYAIAYTNRGDVFRSKGEYNR 214

Query: 212 ---------HFVVHKMIVPGDRERVEQSLKEFRNFVDTHSNVVEACTLFAQVLVDQED-- 260
                     F    +I   +R    Q++ E+   +  ++  +     +   +V++ D  
Sbjct: 215 AIADYNQALQFDPKPIIAYNNRGLAFQNMGEYDRAISDYTEALRLEPKYVIAVVNRADAF 274

Query: 261 -----FDGAEEYFNRSIRVDPENASLYVHRAMLMLQARGNVDEAIKLIEKAISIDKSCMF 315
                +D A   +++++ ++P  A  Y +R  L  Q +G  D AI    +A+ +D   + 
Sbjct: 275 RIKGEYDRAIVDYDQALHLNPNYAIAYNNRG-LAFQNKGEYDRAIADYSQALRLDPKYVI 333

Query: 316 AYETLGTIEVQRGRLEEAVKCFNKALPLARDEAELSHIYSLRDAAIAQMKVCER----YN 371
           A+   G     +G  + A+  +N+AL L       S  Y+ R  A       +R    Y 
Sbjct: 334 AFVNRGDAFRNKGENDVAIADYNQALRL---NPSYSTAYNTRGLAFQNKGEYDRAIADYE 390

Query: 372 IKKKVSPRSQNITKNEKLAIKQLRENNDIIIRPADKGGKTVVMDKADYTQKMTSILNSND 431
              ++ P+S     N   A++   E +  I                DY Q +   LN   
Sbjct: 391 QAIRLDPKSAIAYNNRGFALQSKGEYDRAIT---------------DYNQALQ--LN--- 430

Query: 432 YEIIPGDPTKTIEESEKYGNLENESGQKHAASDFTKAFADLDEAEKVDPNVADSYYQRGQ 491
                  P   I  + + G +    G+      + +A AD D A + DP  A +Y  RG 
Sbjct: 431 -------PKSAITYTNR-GFVFQSKGE------YDRAIADYDLALQFDPKYAIAYTNRGD 476

Query: 492 IYCLFGQYEEALRNLDKTIALNPNFHVARAQR 523
           ++   G+Y+ A+ N D+ I LNP + VA   R
Sbjct: 477 VFRSKGEYDRAIANYDQAIQLNPKYVVAYNNR 508



 Score = 82.8 bits (203), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 94/443 (21%), Positives = 186/443 (41%), Gaps = 25/443 (5%)

Query: 94  NHTKALARLLRATVYIFTSQSTKAIEDLTQLVEDTSVDPKIKVNAHIKRAVVHLHAASDF 153
           N   A+A   R   +    +  +AI D +Q +    +DPK  + A + R     +   + 
Sbjct: 294 NPNYAIAYNNRGLAFQNKGEYDRAIADYSQALR---LDPKYVI-AFVNRGDAFRNKGEN- 348

Query: 154 TKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQRHF 213
             A AD ++A +++P+ + +Y  RG  +   G+Y+ A+ + ++ I L+P   +A   R F
Sbjct: 349 DVAIADYNQALRLNPSYSTAYNTRGLAFQNKGEYDRAIADYEQAIRLDPKSAIAYNNRGF 408

Query: 214 VVHKMIVPGDRERVEQSLKEFRNFVDTHSNVVEACTLFAQVLVDQEDFDGAEEYFNRSIR 273
            +        +   ++++ ++   +  +       T    V   + ++D A   ++ +++
Sbjct: 409 ALQS------KGEYDRAITDYNQALQLNPKSAITYTNRGFVFQSKGEYDRAIADYDLALQ 462

Query: 274 VDPENASLYVHRAMLMLQARGNVDEAIKLIEKAISIDKSCMFAYETLGTIEVQRGRLEEA 333
            DP+ A  Y +R  +  +++G  D AI   ++AI ++   + AY   G     +G  + A
Sbjct: 463 FDPKYAIAYTNRGDV-FRSKGEYDRAIANYDQAIQLNPKYVVAYNNRGLALQNKGEPDRA 521

Query: 334 VKCFNKALPLARDEAELSHIYSLRDAAIAQMKVCER----YNIKKKVSPRSQNITKNEKL 389
           +  +++AL L          Y  R  A      C+R    YN   ++   +     N  L
Sbjct: 522 IANYDQALQL---NPRYIVAYINRGDAFRSKGECDRAVSDYNQGLELDHNNVLAYNNRGL 578

Query: 390 AIKQLRENNDIIIRPADKGGKTVVMDKADYTQKMTSILNSNDYEIIPGDPTKTIEESEKY 449
              Q R   D+ I   D   +        +  +  +    ++Y+    D  + ++   K 
Sbjct: 579 CF-QNRGEYDLAIADYDHALQIDPKYATAFVNRGFAFQKKSEYDRAIADYDRALQLDPKS 637

Query: 450 GNLENESG---QKHAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNL 506
               N  G   Q   A D   A AD D A  + P +A++YY RG ++   G  + ++ +L
Sbjct: 638 AVAYNNRGFAFQSKGAYDL--AIADYDHALLLKPGLANAYYHRGTVFSFKGNLDHSISDL 695

Query: 507 DKTIALNPNFHVARAQRHFVWTS 529
            + I LNP +  A   R   + +
Sbjct: 696 SEAIRLNPKYAEAYQDRGITYQA 718



 Score = 82.4 bits (202), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 100/459 (21%), Positives = 198/459 (43%), Gaps = 37/459 (8%)

Query: 87  EIESTSSNHTKAL--------ARLLRATVYIFTSQSTKAIEDLTQLVEDTSVDPKIKVNA 138
           E +   S++T+AL        A + RA  +    +  +AI D  Q +    ++P   + A
Sbjct: 245 EYDRAISDYTEALRLEPKYVIAVVNRADAFRIKGEYDRAIVDYDQALH---LNPNYAI-A 300

Query: 139 HIKRAVVHLHAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTI 198
           +  R +       ++ +A AD  +A ++DP    ++  RG  +   G+ + A+ + ++ +
Sbjct: 301 YNNRGLA-FQNKGEYDRAIADYSQALRLDPKYVIAFVNRGDAFRNKGENDVAIADYNQAL 359

Query: 199 ALNPNFHVARAQRHFVVHKMIVPGDRERV----EQSLKEFRNFVDTHSNVVEACTLFAQV 254
            LNP++  A   R          G+ +R     EQ+++     +D  S +      FA  
Sbjct: 360 RLNPSYSTAYNTRGLAFQNK---GEYDRAIADYEQAIR-----LDPKSAIAYNNRGFA-- 409

Query: 255 LVDQEDFDGAEEYFNRSIRVDPENASLYVHRAMLMLQARGNVDEAIKLIEKAISIDKSCM 314
           L  + ++D A   +N++++++P++A  Y +R   + Q++G  D AI   + A+  D    
Sbjct: 410 LQSKGEYDRAITDYNQALQLNPKSAITYTNRG-FVFQSKGEYDRAIADYDLALQFDPKYA 468

Query: 315 FAYETLGTIEVQRGRLEEAVKCFNKALPLARDEAELSHIYSLRDAAIAQMKVCER----Y 370
            AY   G +   +G  + A+  +++A+ L     +    Y+ R  A+      +R    Y
Sbjct: 469 IAYTNRGDVFRSKGEYDRAIANYDQAIQL---NPKYVVAYNNRGLALQNKGEPDRAIANY 525

Query: 371 NIKKKVSPRSQNITKNEKLAIKQLRENNDIIIRPADKGGKTVVMDKADYTQKMTSILNSN 430
           +   +++PR      N   A +   E  D  +   ++G +    +   Y  +     N  
Sbjct: 526 DQALQLNPRYIVAYINRGDAFRSKGEC-DRAVSDYNQGLELDHNNVLAYNNRGLCFQNRG 584

Query: 431 DYEIIPGDPTKTIEESEKYGN-LENESGQKHAASDFTKAFADLDEAEKVDPNVADSYYQR 489
           +Y++   D    ++   KY     N        S++ +A AD D A ++DP  A +Y  R
Sbjct: 585 EYDLAIADYDHALQIDPKYATAFVNRGFAFQKKSEYDRAIADYDRALQLDPKSAVAYNNR 644

Query: 490 GQIYCLFGQYEEALRNLDKTIALNPNFHVARAQRHFVWT 528
           G  +   G Y+ A+ + D  + L P    A   R  V++
Sbjct: 645 GFAFQSKGAYDLAIADYDHALLLKPGLANAYYHRGTVFS 683



 Score = 77.8 bits (190), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 97/449 (21%), Positives = 190/449 (42%), Gaps = 61/449 (13%)

Query: 116 KAIEDLTQLVEDTSVDPKIKVNAHIKRAVVHLHAASDFTKAFADLDEAEKVDPNVADSYY 175
           +AI D T+ +    ++PK  + A + RA        ++ +A  D D+A  ++PN A +Y 
Sbjct: 248 RAISDYTEALR---LEPKYVI-AVVNRADA-FRIKGEYDRAIVDYDQALHLNPNYAIAYN 302

Query: 176 QRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQRHFVVHKMIVPGD--RERVEQ--SL 231
            RG  +   G+Y+ A+ +  + + L+P + +A   R          GD  R + E   ++
Sbjct: 303 NRGLAFQNKGEYDRAIADYSQALRLDPKYVIAFVNR----------GDAFRNKGENDVAI 352

Query: 232 KEFRNFVDTHSNVVEACTLFAQVLVDQEDFDGAEEYFNRSIRVDPENASLYVHRAMLMLQ 291
            ++   +  + +   A         ++ ++D A   + ++IR+DP++A  Y +R    LQ
Sbjct: 353 ADYNQALRLNPSYSTAYNTRGLAFQNKGEYDRAIADYEQAIRLDPKSAIAYNNRG-FALQ 411

Query: 292 ARGNVDEAIKLIEKAISIDKSCMFAYETLGTIEVQRGRLEEAVKCFNKALPLARDEAELS 351
           ++G  D AI    +A+ ++      Y   G +   +G  + A+  ++ AL     + + +
Sbjct: 412 SKGEYDRAITDYNQALQLNPKSAITYTNRGFVFQSKGEYDRAIADYDLALQF---DPKYA 468

Query: 352 HIYSLRDAAIAQMKVCER----YNIKKKVSPRSQNITKNEKLAIKQLRENNDIIIRPADK 407
             Y+ R          +R    Y+   +++P+      N  LA++   E +  I      
Sbjct: 469 IAYTNRGDVFRSKGEYDRAIANYDQAIQLNPKYVVAYNNRGLALQNKGEPDRAI------ 522

Query: 408 GGKTVVMDKADYTQKM-------TSILNSNDYEIIPGDPTKTIEESEKYGNLE------- 453
                    A+Y Q +        + +N  D     G+  + + +  +   L+       
Sbjct: 523 ---------ANYDQALQLNPRYIVAYINRGDAFRSKGECDRAVSDYNQGLELDHNNVLAY 573

Query: 454 NESG---QKHAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTI 510
           N  G   Q     D   A AD D A ++DP  A ++  RG  +    +Y+ A+ + D+ +
Sbjct: 574 NNRGLCFQNRGEYDL--AIADYDHALQIDPKYATAFVNRGFAFQKKSEYDRAIADYDRAL 631

Query: 511 ALNPNFHVARAQRHFVWTSTLAELMAFSD 539
            L+P   VA   R F + S  A  +A +D
Sbjct: 632 QLDPKSAVAYNNRGFAFQSKGAYDLAIAD 660



 Score = 73.6 bits (179), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 87/395 (22%), Positives = 167/395 (42%), Gaps = 38/395 (9%)

Query: 151 SDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQ 210
            ++ +A AD ++A ++DP +  +Y  RG  +   G+Y+ A+ + ++ + L+P   +A   
Sbjct: 40  GEYDRAIADYNQALRLDPKLTAAYVNRGFTFRSKGEYDRAIADYNQALRLDPRSVIAYNN 99

Query: 211 RH-FVVHKMIVPGDRERV----EQSLKEFRNFVDTHSNVVEACTLFAQVLVDQEDFDGAE 265
           R     HK    GD ER      ++L+     +D    +V     FA     + ++D A 
Sbjct: 100 RGDAFYHK----GDYERAIADYNRALQ-----LDPKHPIVYNNRGFA--FHGKGEYDRAI 148

Query: 266 EYFNRSIRVDPENASLYVHRAMLMLQARGNVDEAIKLIEKAISIDKSCMFAYETLGTIEV 325
             +N+++++DP     Y +R     Q +G  D AI    +A+ +D     AY   G +  
Sbjct: 149 ADYNQALQLDPNYTFAYNNRG-FAFQGKGEYDRAIADYSQALRLDPKYAIAYTNRGDVFR 207

Query: 326 QRGRLEEAVKCFNKALPLARDEAELSHIYSLRDAAIAQMKVCER----YNIKKKVSPRSQ 381
            +G    A+  +N+AL     + +    Y+ R  A   M   +R    Y    ++ P+  
Sbjct: 208 SKGEYNRAIADYNQALQF---DPKPIIAYNNRGLAFQNMGEYDRAISDYTEALRLEPKYV 264

Query: 382 NITKNEKLAIKQLRENNDIIIRPADKGGKTVVMDKADYTQKMTSILNSNDYEIIPGDPTK 441
               N   A + ++   D  I   D+           Y  +  +  N  +Y+    D ++
Sbjct: 265 IAVVNRADAFR-IKGEYDRAIVDYDQALHLNPNYAIAYNNRGLAFQNKGEYDRAIADYSQ 323

Query: 442 TIEESEKY-------GNLENESGQKHAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYC 494
            +    KY       G+     G+         A AD ++A +++P+ + +Y  RG  + 
Sbjct: 324 ALRLDPKYVIAFVNRGDAFRNKGENDV------AIADYNQALRLNPSYSTAYNTRGLAFQ 377

Query: 495 LFGQYEEALRNLDKTIALNPNFHVARAQRHFVWTS 529
             G+Y+ A+ + ++ I L+P   +A   R F   S
Sbjct: 378 NKGEYDRAIADYEQAIRLDPKSAIAYNNRGFALQS 412



 Score = 67.8 bits (164), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 78/372 (20%), Positives = 154/372 (41%), Gaps = 22/372 (5%)

Query: 151 SDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQ 210
            ++ +A AD ++A ++DP  A +Y  RG      G+Y+ A+ + ++ + LNP   +    
Sbjct: 380 GEYDRAIADYEQAIRLDPKSAIAYNNRGFALQSKGEYDRAITDYNQALQLNPKSAITYTN 439

Query: 211 RHFVVHKMIVPGDRERVEQSLKEFRNFVDTHSNVVEACTLFAQVLVDQEDFDGAEEYFNR 270
           R FV         +   ++++ ++   +        A T    V   + ++D A   +++
Sbjct: 440 RGFVFQS------KGEYDRAIADYDLALQFDPKYAIAYTNRGDVFRSKGEYDRAIANYDQ 493

Query: 271 SIRVDPENASLYVHRAMLMLQARGNVDEAIKLIEKAISIDKSCMFAYETLGTIEVQRGRL 330
           +I+++P+    Y +R  L LQ +G  D AI   ++A+ ++   + AY   G     +G  
Sbjct: 494 AIQLNPKYVVAYNNRG-LALQNKGEPDRAIANYDQALQLNPRYIVAYINRGDAFRSKGEC 552

Query: 331 EEAVKCFNKALPLARDEAELSHIYSL-------RDAAIAQMKVCERYNIKKKVSPRSQNI 383
           + AV  +N+ L L  +     +   L        D AIA       Y+   ++ P+    
Sbjct: 553 DRAVSDYNQGLELDHNNVLAYNNRGLCFQNRGEYDLAIAD------YDHALQIDPKYATA 606

Query: 384 TKNEKLAIKQLRENNDIIIRPADKGGKTVVMDKADYTQKMTSILNSNDYEIIPGDPTKTI 443
             N   A ++  E  D  I   D+  +        Y  +  +  +   Y++   D    +
Sbjct: 607 FVNRGFAFQKKSEY-DRAIADYDRALQLDPKSAVAYNNRGFAFQSKGAYDLAIADYDHAL 665

Query: 444 EESEKYGNLENESGQKHA-ASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEA 502
                  N     G   +   +   + +DL EA +++P  A++Y  RG  Y   G+ + A
Sbjct: 666 LLKPGLANAYYHRGTVFSFKGNLDHSISDLSEAIRLNPKYAEAYQDRGITYQARGEPDRA 725

Query: 503 LRNLDKTIALNP 514
           L +  +   L P
Sbjct: 726 LADFAEAARLKP 737



 Score = 66.6 bits (161), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 74/376 (19%), Positives = 153/376 (40%), Gaps = 44/376 (11%)

Query: 171 ADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQRHFVVHKMIVPGDRERVEQS 230
           A  Y  RG  +   G+Y+ A+ + ++ + L+P    A   R F          +   +++
Sbjct: 26  AAGYNTRGYSFQNKGEYDRAIADYNQALRLDPKLTAAYVNRGFTFRS------KGEYDRA 79

Query: 231 LKEFRNFVDTHSNVVEACTLFAQVLVDQEDFDGAEEYFNRSIRVDPENASLYVHRAMLML 290
           + ++   +      V A          + D++ A   +NR++++DP++  +Y +R     
Sbjct: 80  IADYNQALRLDPRSVIAYNNRGDAFYHKGDYERAIADYNRALQLDPKHPIVYNNRG-FAF 138

Query: 291 QARGNVDEAIKLIEKAISIDKSCMFAYETLGTIEVQRGRLEEAVKCFNKALPLARDEAEL 350
             +G  D AI    +A+ +D +  FAY   G     +G  + A+  +++AL L   + + 
Sbjct: 139 HGKGEYDRAIADYNQALQLDPNYTFAYNNRGFAFQGKGEYDRAIADYSQALRL---DPKY 195

Query: 351 SHIYSLRDAAIAQMKVCER----YNIKKKVSPRSQNITKNEKLAIKQLRENNDIIIRPAD 406
           +  Y+ R           R    YN   +  P+      N  LA + + E +  I     
Sbjct: 196 AIAYTNRGDVFRSKGEYNRAIADYNQALQFDPKPIIAYNNRGLAFQNMGEYDRAI----- 250

Query: 407 KGGKTVVMDKADYTQKM-------TSILNSNDYEIIPGDPTKTIEESEK-------YGNL 452
                     +DYT+ +        +++N  D   I G+  + I + ++       Y   
Sbjct: 251 ----------SDYTEALRLEPKYVIAVVNRADAFRIKGEYDRAIVDYDQALHLNPNYAIA 300

Query: 453 ENESGQK-HAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIA 511
            N  G       ++ +A AD  +A ++DP    ++  RG  +   G+ + A+ + ++ + 
Sbjct: 301 YNNRGLAFQNKGEYDRAIADYSQALRLDPKYVIAFVNRGDAFRNKGENDVAIADYNQALR 360

Query: 512 LNPNFHVARAQRHFVW 527
           LNP++  A   R   +
Sbjct: 361 LNPSYSTAYNTRGLAF 376


>gi|428320482|ref|YP_007118364.1| Tetratricopeptide TPR_1 repeat-containing protein [Oscillatoria
           nigro-viridis PCC 7112]
 gi|428244162|gb|AFZ09948.1| Tetratricopeptide TPR_1 repeat-containing protein [Oscillatoria
           nigro-viridis PCC 7112]
          Length = 1011

 Score = 87.4 bits (215), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 112/467 (23%), Positives = 205/467 (43%), Gaps = 53/467 (11%)

Query: 81  IRHCTEEIESTSSNHTKAL--------ARLLRATVYIFTSQSTKAIEDLTQLVEDTSVDP 132
           ++H   + E   S++TKA+        A + R  V     +  +AI D T+ +E   ++P
Sbjct: 186 VKHELGKKEEALSDYTKAIDLDSKLDVAYVGRGLVKSELEEKAEAIADYTKAIE---LNP 242

Query: 133 KIKVNAHIKRAVVHLHAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALR 192
           K  V A+  R +          +A AD ++A  +DPN AD+Y  RG++    G+ EEA  
Sbjct: 243 K-DVGAYKNRGLAKFSLGR-IEEALADYNQAIDLDPNDADAYNNRGKVKYELGEKEEARA 300

Query: 193 NLDKTIALNPNFHVARAQRHFVVHKMIVPGDRERVEQSLKEFRNFVDTHSNVVEACTLFA 252
           +  K   LNP   VA   +    ++        ++E+++  +   +D + N  +A     
Sbjct: 301 DFVKANNLNPKLAVAYYTQGLAKYR------EGKIEEAIANYNQAIDLNPNYADAYHNRG 354

Query: 253 QVLVDQEDFDGAEEYFNRSIRVDPENASLYVHRAMLMLQARGNVDEAIKLIEKAISIDKS 312
               + E  + A   +N++I ++P+ A+ Y +R +   +  G ++EA+    +AI +D +
Sbjct: 355 LAKYNLEKREEAIADYNQAIDLNPKLAAGYNNRGLAKSR-LGRIEEALADYNQAIELDAN 413

Query: 313 CMFAYETLGTIEVQRGRLEEAVKCFNKALPLARDEAELSHIYSLRDAAIAQMKVCERYNI 372
              AY   G ++ + G  +EA   F KA  L     +L+ +Y  R    +++        
Sbjct: 414 DADAYNNRGNVKYELGAKQEARADFVKANDL---NPKLAFVYFKRGVGKSELAEK----- 465

Query: 373 KKKVSPRSQNITKNEKLAIKQLRENNDIIIRPADKGGKTVVMDKADYTQKMTSILNSNDY 432
            + ++  S  +  N KLA+  L   N   I+  + G +   +  ADY Q           
Sbjct: 466 AEALAAFSNAVNLNPKLAVAYLLRGN---IK-GEIGNQEEAL--ADYNQ----------- 508

Query: 433 EIIPGDPTKTIEESEKYGNLENESGQKHAASDFTKAFADLDEAEKVDPNVADSYYQRGQI 492
             I  DP  +     + G +++  G K       +A AD ++A  ++P  + +Y  RG +
Sbjct: 509 -AIHLDPKLSAAYVNR-GIVKSALGHK------AEALADYNQAIHLEPKFSAAYVNRGMV 560

Query: 493 YCLFGQYEEALRNLDKTIALNPNFHVARAQRHFVWTSTLAELMAFSD 539
               GQ  EA+ + ++ I LNP   +A   R    +    +  A SD
Sbjct: 561 KSDLGQKAEAISDYNQAIELNPKLALAYVNRGAAKSELGHKAEAISD 607



 Score = 83.6 bits (205), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 104/409 (25%), Positives = 189/409 (46%), Gaps = 47/409 (11%)

Query: 116 KAIEDLTQLVEDTSVDPKIKVNAHIKRAVVHLHAASDFTKAFADLDEAEKVDPNVADSYY 175
           +AI D  Q ++   ++PK+    +  R +          +A AD ++A ++D N AD+Y 
Sbjct: 365 EAIADYNQAID---LNPKLAA-GYNNRGLAKSRLGR-IEEALADYNQAIELDANDADAYN 419

Query: 176 QRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQRHFVVHKMIVP-GDRERVEQSLKEF 234
            RG +    G  +EA  +  K   LNP          FV  K  V   +     ++L  F
Sbjct: 420 NRGNVKYELGAKQEARADFVKANDLNPKLA-------FVYFKRGVGKSELAEKAEALAAF 472

Query: 235 RNFVDTHSNVVEACTLFAQVLVDQEDFDGAEEYFNRSIRVDPENASLYVHRAMLMLQARG 294
            N V+ +  +  A  L   +  +  + + A   +N++I +DP+ ++ YV+R ++   A G
Sbjct: 473 SNAVNLNPKLAVAYLLRGNIKGEIGNQEEALADYNQAIHLDPKLSAAYVNRGIVK-SALG 531

Query: 295 NVDEAIKLIEKAISIDKSCMFAYETLGTIEVQRGRLEEAVKCFNKALPLARDEAELSHIY 354
           +  EA+    +AI ++     AY   G ++   G+  EA+  +N+A+ L     +L+  Y
Sbjct: 532 HKAEALADYNQAIHLEPKFSAAYVNRGMVKSDLGQKAEAISDYNQAIEL---NPKLALAY 588

Query: 355 SLRDAAIAQMKVCERYNIKKKVSPRSQNITKNEKLAIKQLRENNDIIIRPADKGGKTVVM 414
             R AA +++      +  + +S  +Q +  + KLA+             A++G      
Sbjct: 589 VNRGAAKSELG-----HKAEAISDYNQALDLDPKLAVAY-----------ANRGSA---- 628

Query: 415 DKADYTQKMTSILNSNDYEIIPGDPTKTIEESEKYGNLENESGQKHAASDFTKAFADLDE 474
            K +  QK  +I + N  + I  DP   I   E+ G ++ + G+K       +A +D ++
Sbjct: 629 -KYELGQKAEAISDYN--QAIDLDPKLAIAYVER-GYVKYDLGEKE------EAISDYNQ 678

Query: 475 AEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQR 523
           A +++PN AD+YY RG      G+ E+ L +  + I LNPN+  A   R
Sbjct: 679 AIELNPNYADAYYTRGLANSALGKTEDPLADRTQAIELNPNYSDAYYTR 727



 Score = 78.2 bits (191), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 110/469 (23%), Positives = 183/469 (39%), Gaps = 45/469 (9%)

Query: 98  ALARLLRATVYIFTSQSTKAIEDLTQLVEDTSVDPKIKVNAHIKRAVVHLHAASDFTKAF 157
           A+A LLR  +        +A+ D  Q +    +DPK+   A++ R +V   A     +A 
Sbjct: 483 AVAYLLRGNIKGEIGNQEEALADYNQAIH---LDPKLSA-AYVNRGIVK-SALGHKAEAL 537

Query: 158 ADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQRHF---- 213
           AD ++A  ++P  + +Y  RG +    GQ  EA+ + ++ I LNP   +A   R      
Sbjct: 538 ADYNQAIHLEPKFSAAYVNRGMVKSDLGQKAEAISDYNQAIELNPKLALAYVNRGAAKSE 597

Query: 214 VVHKMIVPGDRERVEQSLKEFRNFVDTHSNVVEACTLFAQVLVDQEDFDGAEEYFNRSIR 273
           + HK     D     Q+L         ++N   A     Q      D+       N++I 
Sbjct: 598 LGHKAEAISD---YNQALDLDPKLAVAYANRGSAKYELGQKAEAISDY-------NQAID 647

Query: 274 VDPENASLYVHRAMLMLQARGNVDEAIKLIEKAISIDKSCMFAYETLGTIEVQRGRLEEA 333
           +DP+ A  YV R  +     G  +EAI    +AI ++ +   AY T G      G+ E+ 
Sbjct: 648 LDPKLAIAYVERGYVKYD-LGEKEEAISDYNQAIELNPNYADAYYTRGLANSALGKTEDP 706

Query: 334 VKCFNKALPLARDEAELSHIYSLRDAAIAQMKVCE------------RYNIKKKVSPRSQ 381
           +    +A+ L       S  Y  R  A + ++  E             YN       R  
Sbjct: 707 LADRTQAIEL---NPNYSDAYYTRSVANSALETAEEILVDYTQALDLNYNSANAYFRRGS 763

Query: 382 NITKNEKLAIKQLRENNDIIIRPADKGGKTVVMDKADYTQKMTSILNSNDYEIIPGDPTK 441
           + +  EK A      N  I + P          D   Y  +  +  N  + E    D  +
Sbjct: 764 SKSDVEKKAEAIADYNQAIELNP---------KDAVAYNNRGLAKYNLGENEEALADYNQ 814

Query: 442 TIEESEKYGNLENESG-QKHAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYE 500
            I  +  Y +  N  G  K       +A AD ++A  ++   AD+Y  RG      GQ  
Sbjct: 815 AIHLNSCYADAYNNRGLAKSFLGQTEEAIADYNQALDLNSCYADAYLNRGLAKSALGQKA 874

Query: 501 EALRNLDKTIALNPNFHVARAQRHFVWTSTLAELMAFSDEFMIPKITYY 549
           EA+ + ++ I ++P   VA   R    ++   +  A +D     ++ YY
Sbjct: 875 EAIADYNQAIDIDPKLAVAYNNRGNTKSALGEKTEAIADYTKAIELNYY 923



 Score = 77.4 bits (189), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 98/440 (22%), Positives = 192/440 (43%), Gaps = 76/440 (17%)

Query: 124 LVEDTSVDPKIKVNAHIKRAVVHLHAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCL 183
            V+  +++PK+ V A+  + +          +A A+ ++A  ++PN AD+Y+ RG     
Sbjct: 302 FVKANNLNPKLAV-AYYTQGLAKYREGK-IEEAIANYNQAIDLNPNYADAYHNRGLAKYN 359

Query: 184 FGQYEEALRNLDKTIALNPNFHVARAQRHFVVHKMIVPGDRERVEQSLKEFRNFVDTHSN 243
             + EEA+ + ++ I LNP        R     ++       R+E++L ++   ++  +N
Sbjct: 360 LEKREEAIADYNQAIDLNPKLAAGYNNRGLAKSRL------GRIEEALADYNQAIELDAN 413

Query: 244 VVEACTLFAQVLVD-------QEDFDGAEE--------YFNR------------------ 270
             +A      V  +       + DF  A +        YF R                  
Sbjct: 414 DADAYNNRGNVKYELGAKQEARADFVKANDLNPKLAFVYFKRGVGKSELAEKAEALAAFS 473

Query: 271 -SIRVDPENASLYVHRAMLMLQARGNVDEAIKLIEKAISIDKSCMFAYETLGTIEVQRGR 329
            ++ ++P+ A  Y+ R  +  +  GN +EA+    +AI +D     AY   G ++   G 
Sbjct: 474 NAVNLNPKLAVAYLLRGNIKGEI-GNQEEALADYNQAIHLDPKLSAAYVNRGIVKSALGH 532

Query: 330 LEEAVKCFNKALPLARDEAELSHIYSLRDAAIAQMKVCERYNIKKKVSPRSQNITKNEKL 389
             EA+  +N+A+ L   E + S  Y  R   + +  + ++    + +S  +Q I  N KL
Sbjct: 533 KAEALADYNQAIHL---EPKFSAAYVNR--GMVKSDLGQK---AEAISDYNQAIELNPKL 584

Query: 390 AIKQLRENNDIIIRPADKGGKTVVMDKADYTQKMTSILNSNDYEIIPGDPTKTIEESEKY 449
           A+  +           ++G       K++   K  +I + N  + +  DP   +  + + 
Sbjct: 585 ALAYV-----------NRGAA-----KSELGHKAEAISDYN--QALDLDPKLAVAYANR- 625

Query: 450 GNLENESGQKHAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKT 509
           G+ + E GQK       +A +D ++A  +DP +A +Y +RG +    G+ EEA+ + ++ 
Sbjct: 626 GSAKYELGQK------AEAISDYNQAIDLDPKLAIAYVERGYVKYDLGEKEEAISDYNQA 679

Query: 510 IALNPNFHVARAQRHFVWTS 529
           I LNPN+  A   R    ++
Sbjct: 680 IELNPNYADAYYTRGLANSA 699



 Score = 76.6 bits (187), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 98/415 (23%), Positives = 171/415 (41%), Gaps = 45/415 (10%)

Query: 98  ALARLLRATVYIFTSQSTKAIEDLTQLVEDTSVDPKIKVNAHIKRAVVHLHAASDFTKAF 157
           A+A   R +      Q  +AI D  Q ++   +DPK+ + A+++R  V  +   +  +A 
Sbjct: 619 AVAYANRGSAKYELGQKAEAISDYNQAID---LDPKLAI-AYVERGYVK-YDLGEKEEAI 673

Query: 158 ADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQRHFVVHK 217
           +D ++A +++PN AD+YY RG      G+ E+ L +  + I LNPN+  A   R      
Sbjct: 674 SDYNQAIELNPNYADAYYTRGLANSALGKTEDPLADRTQAIELNPNYSDAYYTRSVANSA 733

Query: 218 MIVPGDRERVEQSLKEFRNFVDTHSNVVEACTLFAQVLVDQEDFDGAEEYFNRSIRVDPE 277
           +      E  E+ L ++   +D + N   A         D E    A   +N++I ++P+
Sbjct: 734 L------ETAEEILVDYTQALDLNYNSANAYFRRGSSKSDVEKKAEAIADYNQAIELNPK 787

Query: 278 NASLYVHRAMLMLQARGNVDEAIKLIEKAISIDKSCMFAYETLGTIEVQRGRLEEAVKCF 337
           +A  Y +R +      G  +EA+    +AI ++     AY   G  +   G+ EEA+  +
Sbjct: 788 DAVAYNNRGLAKYN-LGENEEALADYNQAIHLNSCYADAYNNRGLAKSFLGQTEEAIADY 846

Query: 338 NKALPLARDEAELSHIYSLRDAAIAQMKVCERYNIKKKVSPRSQNITKNEKLAIKQLREN 397
           N+AL L    A+      L  +A+ Q          + ++  +Q I  + KLA+      
Sbjct: 847 NQALDLNSCYADAYLNRGLAKSALGQKA--------EAIADYNQAIDIDPKLAVAYNNRG 898

Query: 398 NDIIIRPADKGGKTVVMDKADYTQKMTSILNSNDYEIIPGDPTKTIEESEKYGNLENESG 457
           N           K+ + +K +     T  +  N Y   P                 N   
Sbjct: 899 NT----------KSALGEKTEAIADYTKAIELNYYNPHP---------------YYNRGL 933

Query: 458 QKHAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIAL 512
            K+   +   A AD  +  ++    A +YY RG      GQ  EA+ +  K   L
Sbjct: 934 TKYNLGEQEAAIADYSKVIELSYYNAHAYYNRGLAKSDLGQKAEAIADYQKAADL 988



 Score = 73.9 bits (180), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 89/363 (24%), Positives = 158/363 (43%), Gaps = 46/363 (12%)

Query: 155 KAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQRHFV 214
           +A +D ++A +++P +A +Y  RG      G+ EEAL + ++ I L+P    A   R  V
Sbjct: 127 EALSDYNQAIELNPKLASAYLNRGLTKSSLGKKEEALSDYNQAIDLDPKRAAAYVGRALV 186

Query: 215 VHKMIVPGDRERVEQSLKEFRNFVDTHSNVVEACTLFAQVLVDQEDFDGAEEYFNRSIRV 274
            H++       + E++L ++   +D  S +  A      V  + E+   A   + ++I +
Sbjct: 187 KHEL------GKKEEALSDYTKAIDLDSKLDVAYVGRGLVKSELEEKAEAIADYTKAIEL 240

Query: 275 DPENASLYVHRAMLMLQARGNVDEAIKLIEKAISIDKSCMFAYETLGTIEVQRGRLEEAV 334
           +P++   Y +R +    + G ++EA+    +AI +D +   AY   G ++ + G  EEA 
Sbjct: 241 NPKDVGAYKNRGLAKF-SLGRIEEALADYNQAIDLDPNDADAYNNRGKVKYELGEKEEAR 299

Query: 335 KCFNKALPLARDEAELSHIYSL---RDAAIAQMKVCERYNIKKKVSPRSQNITKNEKLAI 391
             F KA  L    A   +   L   R+  I +      YN    ++P   +   N  LA 
Sbjct: 300 ADFVKANNLNPKLAVAYYTQGLAKYREGKIEE--AIANYNQAIDLNPNYADAYHNRGLAK 357

Query: 392 KQLRENNDIIIRPADKGGKTVVMDKADYTQKMTSILNSNDYEIIPGDPTKTIEESEKYGN 451
             L +  + I               ADY Q +   LN    ++  G   + + +S + G 
Sbjct: 358 YNLEKREEAI---------------ADYNQAID--LNP---KLAAGYNNRGLAKS-RLGR 396

Query: 452 LENESGQKHAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIA 511
           +E             +A AD ++A ++D N AD+Y  RG +    G  +EA  +  K   
Sbjct: 397 IE-------------EALADYNQAIELDANDADAYNNRGNVKYELGAKQEARADFVKAND 443

Query: 512 LNP 514
           LNP
Sbjct: 444 LNP 446


>gi|67458702|ref|YP_246326.1| hypothetical protein RF_0310 [Rickettsia felis URRWXCal2]
 gi|67004235|gb|AAY61161.1| Tetratricopeptide repeat domain containing protein [Rickettsia
           felis URRWXCal2]
          Length = 706

 Score = 87.4 bits (215), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 115/482 (23%), Positives = 209/482 (43%), Gaps = 44/482 (9%)

Query: 56  TNESHELDL-LSKAKRAFEHEDYLTAIRHCTEEI------ESTSSNHTKALARLLRATVY 108
           +N +++LD    KA    E E Y TAI++  + +       S  SN   AL +L R    
Sbjct: 2   SNSNNKLDKNFDKALLCLEEEKYETAIKYFDKVLNQDPFLSSAYSNKAFALKQLCR---- 57

Query: 109 IFTSQSTKAIEDLTQLVEDTSVDPKIKVNAHIKRAVVHLHAASDFTKAFADLDEAEKVDP 168
                    IE+  +++ DT++    K++ +     + L     + +A    D+A K+D 
Sbjct: 58  ---------IEEALEVL-DTAIKINPKISGYYDNRGIVLSILGLYEEAIKSYDQALKLDS 107

Query: 169 NVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQRHFVVHKMIVPGDRERVE 228
               ++  +G     +G+Y +AL  LDK I L+P    A A +   + K+       + +
Sbjct: 108 LDVLTFINKGWTLNNWGKYRKALSVLDKAIELDPTDIKAYANKAISLEKL------GKFD 161

Query: 229 QSLKEFRNFVDTHSNVVEACTLFAQVLVDQEDFDGAEEYFNRSIRVDPENASLYVHRAML 288
           + +  +   ++ + N  E     A+ L+D  + + A    N++I ++P     Y H+   
Sbjct: 162 EMVHMYNKALEINPNYSELYFDRAKALIDIGEKEKALIDINKAIEINPNEIEFY-HKKGW 220

Query: 289 MLQARGNVDEAIKLIEKAISIDKSCMFAYETLGTIEVQRGRLEEAVKCFNKALPLARDEA 348
           +L      DEAI+  +K I ID    + Y   G++     + EEA++ FN A+ L   EA
Sbjct: 221 ILSELYKYDEAIECCDKIIEIDSLEPYGYFNKGSMLRLNKKYEEAIEAFNMAINLMPTEA 280

Query: 349 ELSHIYSLRDAAIAQMK----VCERYNIKKKVSPR-SQNITKNEKLAIKQLRENNDIIIR 403
           EL   Y L+   + ++K      + +N   K  P  S    K +  A+ +L+E    I  
Sbjct: 281 EL---YYLKGRCLYELKRYKEAVKEFNKAIKFEPDISSYYYKGQ--ALYRLKEYKKAI-E 334

Query: 404 PADKGGKTVVMDKADYTQKMTSILNSNDYEI---IPGDPTKTIEESEKYGNLENESGQKH 460
             +        D   Y  K  S+     YE    +  +  K   + E+   L  +    +
Sbjct: 335 AYNHALSYPQYDNYTYYFKALSLKKLERYEEAIEVFNEALKIDSKDER--TLSAKGQVLN 392

Query: 461 AASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVAR 520
               + +A    D+A ++DP   ++ Y +G+      +YEEA++  DKTI ++PN+    
Sbjct: 393 ELMRYEEAIKVFDKAIRIDPKNRNAIYAKGEALAKLMRYEEAIKAFDKTIRIDPNYWKPY 452

Query: 521 AQ 522
           A+
Sbjct: 453 AK 454



 Score = 66.2 bits (160), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 93/402 (23%), Positives = 162/402 (40%), Gaps = 76/402 (18%)

Query: 147 LHAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHV 206
           L+    + +A  + ++A K +P+++ SYY +GQ      +Y++A+       A N     
Sbjct: 290 LYELKRYKEAVKEFNKAIKFEPDIS-SYYYKGQALYRLKEYKKAIE------AYNHALSY 342

Query: 207 ARAQRHFVVHKMIVPGDRERVEQSLKEFRNFVDTHSNVVEACTLFAQVLVDQEDFDGAEE 266
            +   +    K +     ER E++++ F   +   S      +   QVL +   ++ A +
Sbjct: 343 PQYDNYTYYFKALSLKKLERYEEAIEVFNEALKIDSKDERTLSAKGQVLNELMRYEEAIK 402

Query: 267 YFNRSIRVDPENA-SLYVHRAMLMLQARGNVDEAIKLIEKAISIDKSCMFAYETLGTIEV 325
            F+++IR+DP+N  ++Y     L    R   +EAIK  +K I ID +    Y   G +  
Sbjct: 403 VFDKAIRIDPKNRNAIYAKGEALAKLMR--YEEAIKAFDKTIRIDPNYWKPYAK-GWVYN 459

Query: 326 QRGRLEEAVKCFNKALPLARDEAELSHIYSLRDAAIAQMKVCERYNIKKKVSPRSQNITK 385
           +  + + A+  FNK + L + EA     Y+  + A+A       YN+K     R +    
Sbjct: 460 RLAKYKNAINYFNKVIELGKAEA-----YTYYEIALAS------YNLK-----RYKTAII 503

Query: 386 NEKLAIKQLRENNDIIIRPADKGGKTVVMDKADYTQKMTSILNSNDYE--------IIPG 437
           N   AI              + G K + +  + Y+ K   + N  +YE        +I  
Sbjct: 504 NYDKAI--------------ELGIKALDLKVSTYSTKGDCLYNIKNYEAALESYNKVIEL 549

Query: 438 DPTKTIEESEKYGNLENESGQKHAASDFTKAF-------------ADLDEAEKVDPNVAD 484
           DP   +   +K   L+N    + A  ++ K               AD+    K  P   D
Sbjct: 550 DPANYVHYYDKAYTLDNLKRYEEALENYDKVILLNPSYSSAYINKADIFCKLKKYPKAID 609

Query: 485 --------------SYYQRGQIYCLFGQYEEALRNLDKTIAL 512
                         +YY +G       QYEE + NLDK+I L
Sbjct: 610 CSNQALAIVTDDDAAYYNKGLALIKLQQYEEGIENLDKSIKL 651



 Score = 57.0 bits (136), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 59/275 (21%), Positives = 118/275 (42%), Gaps = 38/275 (13%)

Query: 108 YIFTSQSTKAIEDLTQLVEDTSVDPKIKVNAHIKRAVVH----LHAASDFTKAFADLDEA 163
           Y F + S K +E   + +E    +  +K+++  +R +      L+    + +A    D+A
Sbjct: 350 YYFKALSLKKLERYEEAIE--VFNEALKIDSKDERTLSAKGQVLNELMRYEEAIKVFDKA 407

Query: 164 EKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQRHF---------- 213
            ++DP   ++ Y +G+      +YEEA++  DKTI ++PN+    A+             
Sbjct: 408 IRIDPKNRNAIYAKGEALAKLMRYEEAIKAFDKTIRIDPNYWKPYAKGWVYNRLAKYKNA 467

Query: 214 --VVHKMIVPGDRER--------VEQSLKEFRNFVDTHSNVVE-----------ACTLFA 252
               +K+I  G  E            +LK ++  +  +   +E             +   
Sbjct: 468 INYFNKVIELGKAEAYTYYEIALASYNLKRYKTAIINYDKAIELGIKALDLKVSTYSTKG 527

Query: 253 QVLVDQEDFDGAEEYFNRSIRVDPENASLYVHRAMLMLQARGNVDEAIKLIEKAISIDKS 312
             L + ++++ A E +N+ I +DP N   Y  +A   L      +EA++  +K I ++ S
Sbjct: 528 DCLYNIKNYEAALESYNKVIELDPANYVHYYDKAY-TLDNLKRYEEALENYDKVILLNPS 586

Query: 313 CMFAYETLGTIEVQRGRLEEAVKCFNKALPLARDE 347
              AY     I  +  +  +A+ C N+AL +  D+
Sbjct: 587 YSSAYINKADIFCKLKKYPKAIDCSNQALAIVTDD 621


>gi|428313677|ref|YP_007124654.1| hypothetical protein Mic7113_5616 [Microcoleus sp. PCC 7113]
 gi|428255289|gb|AFZ21248.1| hypothetical protein Mic7113_5616 [Microcoleus sp. PCC 7113]
          Length = 1041

 Score = 87.0 bits (214), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 89/413 (21%), Positives = 176/413 (42%), Gaps = 63/413 (15%)

Query: 150 ASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARA 209
           A D+  A +  DEA  ++PN   ++  RG       +YEEA+ +L+  I +NPN H A  
Sbjct: 17  AGDYQGAMSSFDEALAINPNNHHAWIYRGVALIQLKRYEEAIFSLESAIKINPNNHHAWC 76

Query: 210 QRH-----------------------------FVVHKMIVPGDRERVEQSLKEFRNFVDT 240
            R                              + +   I+       E++L  F  F+  
Sbjct: 77  NRSSALQSLGLYQEALTSSNRALELDPDCPTLWKIRGCILANAFGHYEEALNCFNCFLVF 136

Query: 241 HSNVVEACTLFAQVLVDQEDFDGAEEYFNRSIRVDPENASLYVHRAMLMLQARGNVDEAI 300
           ++N  E       VL   E  + A + ++R++ ++P     +  +  L LQ     +EAI
Sbjct: 137 NANDSEVWRNHGTVLSHLERHEEALDSYSRALAINPNEYKTWRDQGAL-LQELNFYEEAI 195

Query: 301 KLIEKAISIDKSCMFAYETLGTIEVQRGRLEEAVKCFNKALPLARDEAELSHIYSLRDAA 360
              + A++++      +   G + ++  R +EA+  ++ AL +      +S ++S R  A
Sbjct: 196 ASYDNALALNSDDYKLWNNQGFLLMRLERYKEAISSYDHALLI---NPNVSEVWSNRGFA 252

Query: 361 IAQMKVCER----YNIKKKVSPRSQNITKNEKLAIKQLRE--------NNDIIIRPADKG 408
           + ++   E     Y+    ++P    +  N   A+ +L          ++ ++I P D  
Sbjct: 253 LWKLGRYEEAISSYDYALSINPNVSEVWSNRGFALWKLGRYEEAVSSFDHALLINPND-- 310

Query: 409 GKTVVMDKADYTQKMTSILNSNDYE--IIPGDPTKTIEESEKYGNLENESGQKHAASD-- 464
             ++V     ++ + +++ + N YE  I   D   +++      N     G+ +A  D  
Sbjct: 311 --SLV-----WSNRGSALDDLNRYEEAISSWDRALSLDPE----NTSAWYGRGNALEDLE 359

Query: 465 -FTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNF 516
            + +A A  D A  ++PN+ + +  RG +    G+YEEA+ + D  ++ NPNF
Sbjct: 360 QYEEAIASWDRALTLNPNLPECWTNRGVLLRKLGRYEEAIASFDHALSQNPNF 412



 Score = 79.7 bits (195), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 57/235 (24%), Positives = 113/235 (48%), Gaps = 10/235 (4%)

Query: 153 FTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQRH 212
           + +A +  D A  ++PNV++ +  RG      G+YEEA+ + D  +++NPN     + R 
Sbjct: 225 YKEAISSYDHALLINPNVSEVWSNRGFALWKLGRYEEAISSYDYALSINPNVSEVWSNRG 284

Query: 213 FVVHKMIVPGDRERVEQSLKEFRNFVDTHSNVVEACTLFAQVLVDQEDFDGAEEYFNRSI 272
           F + K+       R E+++  F + +  + N     +     L D   ++ A   ++R++
Sbjct: 285 FALWKL------GRYEEAVSSFDHALLINPNDSLVWSNRGSALDDLNRYEEAISSWDRAL 338

Query: 273 RVDPENASLYVHRAMLMLQARGNVDEAIKLIEKAISIDKSCMFAYETLGTIEVQRGRLEE 332
            +DPEN S +  R    L+     +EAI   ++A++++ +    +   G +  + GR EE
Sbjct: 339 SLDPENTSAWYGRGN-ALEDLEQYEEAIASWDRALTLNPNLPECWTNRGVLLRKLGRYEE 397

Query: 333 AVKCFNKALPLARDEAELSHIYSLRDAAIAQMKVCERYNIKKKVSPRSQNITKNE 387
           A+  F+ AL    +  E  + ++ R  ++A +   ERY        R+  +T N+
Sbjct: 398 AIASFDHALSQNPNFPEAYNAWNSRGGSLADL---ERYEEAIPCLDRALCLTNNQ 449



 Score = 46.2 bits (108), Expect = 0.049,   Method: Compositional matrix adjust.
 Identities = 23/66 (34%), Positives = 35/66 (53%)

Query: 458 QKHAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFH 517
           Q+  A D+  A +  DEA  ++PN   ++  RG       +YEEA+ +L+  I +NPN H
Sbjct: 13  QQFQAGDYQGAMSSFDEALAINPNNHHAWIYRGVALIQLKRYEEAIFSLESAIKINPNNH 72

Query: 518 VARAQR 523
            A   R
Sbjct: 73  HAWCNR 78



 Score = 45.4 bits (106), Expect = 0.067,   Method: Compositional matrix adjust.
 Identities = 41/168 (24%), Positives = 67/168 (39%), Gaps = 21/168 (12%)

Query: 56  TNESHELDLLSKAKRAFEHEDYLTAIRHCTEEIESTSSNHTKALAR------------LL 103
           +N    L  L + + A    DY  +I     E+ S        L R            L+
Sbjct: 247 SNRGFALWKLGRYEEAISSYDYALSINPNVSEVWSNRGFALWKLGRYEEAVSSFDHALLI 306

Query: 104 RATVYIFTSQSTKAIEDLTQLVEDTS-------VDPKIKVNAHIKRAVVHLHAASDFTKA 156
                +  S    A++DL +  E  S       +DP+   +A   R    L     + +A
Sbjct: 307 NPNDSLVWSNRGSALDDLNRYEEAISSWDRALSLDPE-NTSAWYGRGNA-LEDLEQYEEA 364

Query: 157 FADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNF 204
            A  D A  ++PN+ + +  RG +    G+YEEA+ + D  ++ NPNF
Sbjct: 365 IASWDRALTLNPNLPECWTNRGVLLRKLGRYEEAIASFDHALSQNPNF 412


>gi|435850371|ref|YP_007311957.1| tetratricopeptide repeat protein [Methanomethylovorans hollandica
           DSM 15978]
 gi|433661001|gb|AGB48427.1| tetratricopeptide repeat protein [Methanomethylovorans hollandica
           DSM 15978]
          Length = 504

 Score = 87.0 bits (214), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 110/479 (22%), Positives = 204/479 (42%), Gaps = 38/479 (7%)

Query: 56  TNESHELDLLSKAKRAFEHEDYLTAIRHCTEEIESTSSNHTKALARLLRATVYIFTSQST 115
           T++S E     K    FE E Y  +I    + IE    N   A A   +      T ++ 
Sbjct: 25  TDDSKEF--TKKGNELFEEEKYSESIEAFDKAIELNPQN---ADAWAGKGMALSETGKNE 79

Query: 116 KAIEDLTQLVEDTSVDPKIKVNAHIKRAVVHLHAASDFTKAFADLDEAEKVDPNVADSYY 175
           +AI+       D ++  K           + L     + +A    D+A ++DP    ++Y
Sbjct: 80  EAIQ-----AYDKAIQLKPNNVKFWSEKGIALRKMGRYEEAIQAYDKAIELDPLDGFAWY 134

Query: 176 QRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQRHFVVHKMIVPGDRERVEQSLKEFR 235
            +G       +YEEA++  D+   L P F +A   + +V++        +R E++++ F 
Sbjct: 135 NKGIALFHIKKYEEAIQAYDEATELEPRFAMAWYNKGYVLYYT------KRYEEAIQAFD 188

Query: 236 NFVDTHSNVVEACTLFAQVLVDQEDFDGAEEYFNRSIRVDPENASLYVHRAMLMLQARGN 295
                +    +A        ++      A E  N +I +DP+ ++   ++  L+ Q R  
Sbjct: 189 KATGINKKDAKAWNYKGVSYIELGMNYEAMEALNNAIGLDPQYSTALSNKGYLLNQMR-R 247

Query: 296 VDEAIKLIEKAISIDKSCMFAYETLGTIEVQRGRLEEAVKCFNKALPLARDEAELSHIYS 355
            +EAI++ ++AI I+     A+   G    + G+ EEA++ F+KA+ L   +AE   I+ 
Sbjct: 248 YEEAIRVCDQAIEIEPQDAKAWNYKGYALNEMGKNEEAIQAFDKAIQLDPLDAE---IWY 304

Query: 356 LRDAAIAQMK----VCERYNIKKKVSPRSQNITKNEKLAIKQLRENNDIIIRPADKGGKT 411
            +  A+ +MK      E  N   +++P+      ++  A   + E  + I +  DK  + 
Sbjct: 305 YKGTALYEMKEYEKALENLNKATEINPQYAEAWNDKGRAHYNINEYENAI-QAFDKVIEL 363

Query: 412 VVMDKADYTQKMTSILNSNDYEIIPGDPTKTIEESEKYGNLENESGQKHAASDFTKAFAD 471
              + A +  K  S+    +Y+       K IE      N +N     H           
Sbjct: 364 EPQNDAAWDSKGNSLRRMAEYDEAIQAYDKAIEL-----NPQNSWTWMHKGYTLY-GMGK 417

Query: 472 LDEAEKV-------DPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQR 523
           L+EAE+V       +P  +D++Y +G      G+ +E+++  DK I LNP++ VA   R
Sbjct: 418 LEEAEQVFDKVIELNPENSDAWYSKGNTLRRMGKIDESIQAYDKAIELNPDYAVAWYNR 476



 Score = 62.4 bits (150), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 58/281 (20%), Positives = 125/281 (44%), Gaps = 21/281 (7%)

Query: 64  LLSKAKRAFEHEDYLTAIRHCTEEIESTSSNHTKALARLLRATVYIFTSQSTKAIEDLTQ 123
           LL++ +R      Y  AIR C + IE    +   A A   +        ++ +AI+   +
Sbjct: 241 LLNQMRR------YEEAIRVCDQAIEIEPQD---AKAWNYKGYALNEMGKNEEAIQAFDK 291

Query: 124 LVEDTSVDPKIKVNAHIKRAVVHLHAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCL 183
            ++   +D +I    + K     L+   ++ KA  +L++A +++P  A+++  +G+ +  
Sbjct: 292 AIQLDPLDAEI---WYYKGTA--LYEMKEYEKALENLNKATEINPQYAEAWNDKGRAHYN 346

Query: 184 FGQYEEALRNLDKTIALNPNFHVARAQRHFVVHKMIVPGDRERVEQSLKEFRNFVDTHSN 243
             +YE A++  DK I L P    A   +   + +M         +++++ +   ++ +  
Sbjct: 347 INEYENAIQAFDKVIELEPQNDAAWDSKGNSLRRMA------EYDEAIQAYDKAIELNPQ 400

Query: 244 VVEACTLFAQVLVDQEDFDGAEEYFNRSIRVDPENASLYVHRAMLMLQARGNVDEAIKLI 303
                      L      + AE+ F++ I ++PEN+  +  +    L+  G +DE+I+  
Sbjct: 401 NSWTWMHKGYTLYGMGKLEEAEQVFDKVIELNPENSDAWYSKGN-TLRRMGKIDESIQAY 459

Query: 304 EKAISIDKSCMFAYETLGTIEVQRGRLEEAVKCFNKALPLA 344
           +KAI ++     A+        Q G+  EA   +++A  L 
Sbjct: 460 DKAIELNPDYAVAWYNRAIALDQAGKGTEAAASYSRAKELG 500


>gi|300865616|ref|ZP_07110390.1| hypothetical protein OSCI_2080002 [Oscillatoria sp. PCC 6506]
 gi|300336371|emb|CBN55540.1| hypothetical protein OSCI_2080002 [Oscillatoria sp. PCC 6506]
          Length = 1330

 Score = 87.0 bits (214), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 54/203 (26%), Positives = 111/203 (54%), Gaps = 6/203 (2%)

Query: 141 KRAVVHLHAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIAL 200
           ++A ++L A     +A A  +EA K+ PN A +Y    +I+    + E A     + + L
Sbjct: 16  QQAEIYL-AQGKLNEAIAACEEALKLQPNFAGAYRNLARIWTQLKKAEAAADCWYQALTL 74

Query: 201 NPNFHVARAQRHFVVHKMIVPGDRERVEQSLKEFRNFVDTHSNVVEACTLFAQVLVDQED 260
           +PN+  A A+ H  +   +V  ++ ++E+++  +   +  +S +V+A     ++   +  
Sbjct: 75  DPNW--ATAEEHLTLGNTLV--EQGKLEEAIACYLRAIQANSTLVQAYHNLGEIFTSKNK 130

Query: 261 FDGAEEYFNRSIRVDPENASLYVHRAMLMLQARGNVDEAIKLIEKAISIDKSCMFAYETL 320
           F+ A  Y+ ++I++ P+    + H    +L A+GN+DEAI    K++ I+ + + AY +L
Sbjct: 131 FEEAIAYYRQAIKLKPDAFGSH-HSLGKLLAAKGNIDEAIACQYKSLEINPNYVRAYHSL 189

Query: 321 GTIEVQRGRLEEAVKCFNKALPL 343
           G + VQ+G L+ A+  ++KA+ L
Sbjct: 190 GNVLVQKGELDSAIAYYSKAIEL 212



 Score = 60.8 bits (146), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 50/200 (25%), Positives = 93/200 (46%), Gaps = 11/200 (5%)

Query: 155 KAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQRHFV 214
           +A A    A +++P+   SY   G I     ++EEA     + I +NP+F     +    
Sbjct: 753 RAIAVYRRAIELNPDFCWSYNNLGDILMQLSRWEEAAAAYRQGIKINPDFCWLYNKLGEA 812

Query: 215 VHKMIVPGDRERVEQSLKEFRNFVDTHSNVVEACTLFAQVLVDQEDFDGAEEYFNRSIRV 274
           + K+         E++   +R  +D + +   +     +VL +Q+ ++ A   + R++ +
Sbjct: 813 LVKI------SDWEEAADAYRRSIDLNPDFCWSYYSLGEVLEEQQYWEEAVSAYQRAVEL 866

Query: 275 DPENASLYVHRAMLM--LQARGNVDEAIKLIEKAISIDKSCMFAYETLGTIEVQRGRLEE 332
           + E+  +   R  L   L+  G  DEA+ + E+AI ID    FAYE LG   +++   E 
Sbjct: 867 EAEDTWM---RKKLGDGLRQLGLWDEAMAIYEQAIEIDPKAYFAYEGLGLCLLEKKDWEG 923

Query: 333 AVKCFNKALPLARDEAELSH 352
           A+  F +AL +     E+ H
Sbjct: 924 AIASFIEALQIKPGLLEVYH 943



 Score = 46.6 bits (109), Expect = 0.035,   Method: Compositional matrix adjust.
 Identities = 43/192 (22%), Positives = 84/192 (43%), Gaps = 7/192 (3%)

Query: 155 KAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQRHFV 214
           +A A    A + +  +  +Y+  G+I+    ++EEA+    + I L P+   A    H +
Sbjct: 99  EAIACYLRAIQANSTLVQAYHNLGEIFTSKNKFEEAIAYYRQAIKLKPD---AFGSHHSL 155

Query: 215 VHKMIVPGDRERVEQSLKEFRNFVDTHSNVVEACTLFAQVLVDQEDFDGAEEYFNRSIRV 274
              +   G+   +++++      ++ + N V A      VLV + + D A  Y++++I +
Sbjct: 156 GKLLAAKGN---IDEAIACQYKSLEINPNYVRAYHSLGNVLVQKGELDSAIAYYSKAIEL 212

Query: 275 DPENASLYVHRAMLMLQARGNVDEAIKLIEKAISIDKSCMFAYETLGTIEVQRGRLEEAV 334
           +P     Y     + L+     D+AI   +KAI +     + Y  L          +EA+
Sbjct: 213 NPNYCWSYNSLGDVFLKQE-RWDKAINSYQKAIEMKGDIPWFYYNLAVAMTNLKSWDEAL 271

Query: 335 KCFNKALPLARD 346
             +  AL L RD
Sbjct: 272 AGYLSALVLQRD 283



 Score = 46.2 bits (108), Expect = 0.043,   Method: Compositional matrix adjust.
 Identities = 31/109 (28%), Positives = 51/109 (46%), Gaps = 1/109 (0%)

Query: 232 KEFRNFVDTHSNVVEACTLFAQVLVDQEDFDGAEEYFNRSIRVDPENASLYVHRAMLMLQ 291
           K + N ++  ++  E     A  L  Q  F GA  ++  ++ ++PE+A +       +L 
Sbjct: 322 KTYYNLLNIITDDSEFYVDLANNLTKQHQFSGAIVFYQIALHINPEDAKV-ASELENVLA 380

Query: 292 ARGNVDEAIKLIEKAISIDKSCMFAYETLGTIEVQRGRLEEAVKCFNKA 340
            +  +D  I +    I ID +   AY  LG I  + G LEEA+ C  KA
Sbjct: 381 RKDELDRQISVYRSQIEIDPNSAVAYTDLGNILPKYGELEEAIVCHQKA 429


>gi|309791531|ref|ZP_07686033.1| TPR repeat-containing protein [Oscillochloris trichoides DG-6]
 gi|308226456|gb|EFO80182.1| TPR repeat-containing protein [Oscillochloris trichoides DG6]
          Length = 450

 Score = 86.7 bits (213), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 100/429 (23%), Positives = 180/429 (41%), Gaps = 51/429 (11%)

Query: 98  ALARLLRATVYIFTSQSTKAIEDLTQLVEDTSVDPKIKVNAHIKRAVVHLH--AASDFTK 155
           A AR  R  +Y    +   A+ED ++ +E    D            V+  +  A +DF++
Sbjct: 29  AWARYQRGQIYRDMGRHDDALEDFSRAIELAPDDAAFLAERGETYRVMRRYDEALTDFSQ 88

Query: 156 AFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQRHFVV 215
           A A       +D + A +   RGQ+Y    +Y+EAL +L + I L P+     A+R  ++
Sbjct: 89  AIA-------LDSDYAWALGSRGQVYRSLRRYDEALADLSRAIELRPSMSWVIAERGELL 141

Query: 216 HKMIVPGDRERVEQSLKEFRNFVDTHSNVVEACTLFAQVLVDQEDFDGAEEYFNRSIRVD 275
             +       R ++++ +F   V    + V A    A    +QE +  A      +I++D
Sbjct: 142 RTL------GRTDEAISDFTQAVTIQPDYVWALGHRAIAYREQERYTEALADLEAAIQLD 195

Query: 276 PENASLYVHRAMLMLQARGNVDEAIKLIEKAISIDKSCMFAYETLGTIEVQRGRLEEAVK 335
              A LY  R     +  GN+DEA++ + +AI +D +  +A  + G      G+ +EA++
Sbjct: 196 SSQAWLYAERGEAQ-RLSGNLDEALEDLSRAIDLDPNYAWALASRGAARRTMGQTDEALE 254

Query: 336 CFNKALPLARDEAELSHIYSLRDAAIAQMKVCERYNIKKKVSPRSQNITKNEKLAIKQLR 395
             ++A+ L     +  +I++L   A    +   RY+       R  ++  +   A+ +  
Sbjct: 255 DLSRAIDL-----DPGYIWALSQRATL-YRSLRRYDEALADFSRVIDLNPSHVSALAERG 308

Query: 396 ENNDIIIRPADKGGKTVVMDKADYTQKMTSILNSNDYEIIPGDPTKTIEESEKYGNLENE 455
           E + +  R                            YE    D ++ IE    Y      
Sbjct: 309 EIHRLHKR----------------------------YEEAIADFSRAIEAKSDYAWAIGS 340

Query: 456 SGQK-HAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNP 514
            GQ   A +  ++A  D   A ++ P+ A    +RG+   L  +YEEA+ +L K I LNP
Sbjct: 341 RGQALRALNRNSEALEDFTRAAELRPDEAWIVAERGETLRLLRRYEEAITDLSKAIELNP 400

Query: 515 NFHVARAQR 523
               A ++R
Sbjct: 401 QDSWAYSRR 409



 Score = 77.4 bits (189), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 104/449 (23%), Positives = 183/449 (40%), Gaps = 87/449 (19%)

Query: 146 HLHAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPN-- 203
           H  A SDF++A A       +DPN A + YQRGQIY   G++++AL +  + I L P+  
Sbjct: 11  HEAALSDFSRAIA-------IDPNYAWARYQRGQIYRDMGRHDDALEDFSRAIELAPDDA 63

Query: 204 -FHVARAQRHFVVHK------------------MIVPGDRERVEQSLKEFRNFVDTHSNV 244
            F   R + + V+ +                      G R +V +SL+ +   +   S  
Sbjct: 64  AFLAERGETYRVMRRYDEALTDFSQAIALDSDYAWALGSRGQVYRSLRRYDEALADLSRA 123

Query: 245 V------------------------EACTLFAQVLVDQEDFDGA-----------EEY-- 267
           +                        EA + F Q +  Q D+  A           E Y  
Sbjct: 124 IELRPSMSWVIAERGELLRTLGRTDEAISDFTQAVTIQPDYVWALGHRAIAYREQERYTE 183

Query: 268 ----FNRSIRVDPENASLYVHRAMLMLQARGNVDEAIKLIEKAISIDKSCMFAYETLGTI 323
                  +I++D   A LY  R     +  GN+DEA++ + +AI +D +  +A  + G  
Sbjct: 184 ALADLEAAIQLDSSQAWLYAERGEAQ-RLSGNLDEALEDLSRAIDLDPNYAWALASRGAA 242

Query: 324 EVQRGRLEEAVKCFNKALPLARDEAELSHIYSLRDAAIAQMKVCERYNIKKKVSPRSQNI 383
               G+ +EA++  ++A+ L     +  +I++L   A    +   RY+       R  ++
Sbjct: 243 RRTMGQTDEALEDLSRAIDL-----DPGYIWALSQRATL-YRSLRRYDEALADFSRVIDL 296

Query: 384 TKNEKLAIKQLRENNDIIIR--PADKGGKTVVMDKADYTQKMTS------ILNSNDYEII 435
             +   A+ +  E + +  R   A       +  K+DY   + S       LN N   + 
Sbjct: 297 NPSHVSALAERGEIHRLHKRYEEAIADFSRAIEAKSDYAWAIGSRGQALRALNRNSEAL- 355

Query: 436 PGDPTKTIEESEKYGNLENESGQK-HAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYC 494
             D T+  E       +  E G+       + +A  DL +A +++P  + +Y +RG  Y 
Sbjct: 356 -EDFTRAAELRPDEAWIVAERGETLRLLRRYEEAITDLSKAIELNPQDSWAYSRRGAAYQ 414

Query: 495 LFGQYEEALRNLDKTIALNPNFHVARAQR 523
               +EEA  +L + + ++PN   A AQR
Sbjct: 415 SLKIFEEAFIDLTRAVEIDPNNAWAWAQR 443



 Score = 41.2 bits (95), Expect = 1.3,   Method: Compositional matrix adjust.
 Identities = 41/164 (25%), Positives = 75/164 (45%), Gaps = 8/164 (4%)

Query: 55  DTNESHELDLLSKAKRAFEHEDYLTAIRHCTEEIESTSSNHTKALARLLRATVYIFTSQS 114
           D N SH   L  + +    H+ Y  AI   +  IE+  S++  A+    R       +++
Sbjct: 295 DLNPSHVSALAERGEIHRLHKRYEEAIADFSRAIEA-KSDYAWAIGS--RGQALRALNRN 351

Query: 115 TKAIEDLTQLVEDTSVDPKIKVNAHIKRAVVHLHAASDFTKAFADLDEAEKVDPNVADSY 174
           ++A+ED T+  E    +  I     +      L     + +A  DL +A +++P  + +Y
Sbjct: 352 SEALEDFTRAAELRPDEAWI-----VAERGETLRLLRRYEEAITDLSKAIELNPQDSWAY 406

Query: 175 YQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQRHFVVHKM 218
            +RG  Y     +EEA  +L + + ++PN   A AQR  +  +M
Sbjct: 407 SRRGAAYQSLKIFEEAFIDLTRAVEIDPNNAWAWAQRGSLFRQM 450


>gi|188994836|ref|YP_001929088.1| TPR domain protein [Porphyromonas gingivalis ATCC 33277]
 gi|188594516|dbj|BAG33491.1| TPR domain protein [Porphyromonas gingivalis ATCC 33277]
          Length = 818

 Score = 86.7 bits (213), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 74/291 (25%), Positives = 132/291 (45%), Gaps = 26/291 (8%)

Query: 104 RATVYIFTSQSTKAIEDLTQLVE-DTSVDPKI--KVNAHIKRAVVHLHAASDFTKAFADL 160
           R   Y       +AI+D +Q +E D    P    + NA+ K+          + KA  D 
Sbjct: 65  RGIAYFKKGSYEEAIKDYSQAIELDDKYAPAYHGRGNAYSKKGW--------YKKAIKDY 116

Query: 161 DEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQRHFVVHKMIV 220
            +A ++D   A +YY RG  YC  G YEEA+++  K I LN  +  A   R       I 
Sbjct: 117 SQAIELDDKFAHAYYDRGNAYCEKGSYEEAIKDFSKAIELNDKYTYAYHSR------GIA 170

Query: 221 PGDRERVEQSLKEFRNFVDTHSNVVEACTLFAQVLVDQEDFDGAEEYFNRSIRVDPENAS 280
             ++   ++++K++   ++     V A          +  ++ A + ++++I +D +   
Sbjct: 171 YCEKGSYKEAIKDYSQAIELDGKFVHAYHGRGIAYFKKGSYEEAIKDYSQAIELDGKFVH 230

Query: 281 LYVHRAMLMLQARGNVDEAIKLIEKAISIDKSCMFAYETLGTIEVQRGRLEEAVKCFNKA 340
            Y  R +   + +G  +EAIK   KAI +D     AY   G    ++G  EEA+K ++KA
Sbjct: 231 AYHGRGIAYFK-KGLYEEAIKDYSKAIELDGKFAHAYYDRGNAYCEKGSYEEAIKDYSKA 289

Query: 341 LPLARDEAELSHIYSLRDAAIAQMKVCERYNIKKKVSPRSQNITKNEKLAI 391
           + L   + + +H Y  R  A      CE+ + ++ +   SQ I  ++K  +
Sbjct: 290 IEL---DGKFAHAYHNRGNA-----YCEKGSYEEAIKDYSQAIELDDKYIL 332



 Score = 82.4 bits (202), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 84/360 (23%), Positives = 153/360 (42%), Gaps = 44/360 (12%)

Query: 167 DPNV--ADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQRHFVVHKMIVPGDR 224
           +PN   A +YY RG   C+ G YEEA+++  K I L+  F  A   R     K      +
Sbjct: 19  EPNRQEAIAYYNRGVGCCIVGSYEEAIKDYSKAIELDDKFVHAYHGRGIAYFK------K 72

Query: 225 ERVEQSLKEFRNFVDTHSNVVEACTLFAQVLVDQEDFDGAEEYFNRSIRVDPENASLYVH 284
              E+++K++   ++       A          +  +  A + ++++I +D + A  Y  
Sbjct: 73  GSYEEAIKDYSQAIELDDKYAPAYHGRGNAYSKKGWYKKAIKDYSQAIELDDKFAHAYYD 132

Query: 285 RAMLMLQARGNVDEAIKLIEKAISIDKSCMFAYETLGTIEVQRGRLEEAVKCFNKALPLA 344
           R     + +G+ +EAIK   KAI ++    +AY + G    ++G  +EA+K +++A+ L 
Sbjct: 133 RGNAYCE-KGSYEEAIKDFSKAIELNDKYTYAYHSRGIAYCEKGSYKEAIKDYSQAIEL- 190

Query: 345 RDEAELSHIYSLRDAAIAQMKVCERYNIKKKVSPRSQNITKNEKLAIKQLRENNDIIIRP 404
             + +  H Y  R   IA  K   + + ++ +   SQ I  + K                
Sbjct: 191 --DGKFVHAYHGR--GIAYFK---KGSYEEAIKDYSQAIELDGKFV-------------H 230

Query: 405 ADKGGKTVVMDKADYTQKMTSILNSNDYEIIPGDPTKTIEESEKYGNLENESGQKHA-AS 463
           A  G       K  Y + +              D +K IE   K+ +   + G  +    
Sbjct: 231 AYHGRGIAYFKKGLYEEAIK-------------DYSKAIELDGKFAHAYYDRGNAYCEKG 277

Query: 464 DFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQR 523
            + +A  D  +A ++D   A +Y+ RG  YC  G YEEA+++  + I L+  + +    R
Sbjct: 278 SYEEAIKDYSKAIELDGKFAHAYHNRGNAYCEKGSYEEAIKDYSQAIELDDKYILGYNGR 337



 Score = 59.7 bits (143), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 72/361 (19%), Positives = 145/361 (40%), Gaps = 42/361 (11%)

Query: 153 FTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQRH 212
           + +A  D  +A ++D     +Y+ RG  Y   G YEEA+++  + I L+  +  A   R 
Sbjct: 41  YEEAIKDYSKAIELDDKFVHAYHGRGIAYFKKGSYEEAIKDYSQAIELDDKYAPAYHGRG 100

Query: 213 FVVHKMIVPGDRERVEQSLKEFRNFVDTHSNVVEACTLFAQVLVDQEDFDGAEEYFNRSI 272
               K      +   ++++K++   ++       A         ++  ++ A + F+++I
Sbjct: 101 NAYSK------KGWYKKAIKDYSQAIELDDKFAHAYYDRGNAYCEKGSYEEAIKDFSKAI 154

Query: 273 RVDPENASLYVHRAMLMLQARGNVDEAIKLIEKAISIDKSCMFAYETLGTIEVQRGRLEE 332
            ++ +    Y  R +   + +G+  EAIK   +AI +D   + AY   G    ++G  EE
Sbjct: 155 ELNDKYTYAYHSRGIAYCE-KGSYKEAIKDYSQAIELDGKFVHAYHGRGIAYFKKGSYEE 213

Query: 333 AVKCFNKALPLARDEAELSHIYSLRDAAIAQMKVCERYNIKKKVSPRSQNITKNEKLAIK 392
           A+K +++A+ L   + +  H Y  R  A  +  + E     + +   S+ I  + K A  
Sbjct: 214 AIKDYSQAIEL---DGKFVHAYHGRGIAYFKKGLYE-----EAIKDYSKAIELDGKFA-- 263

Query: 393 QLRENNDIIIRPADKGGKTVVMDKADYTQKMTSILNSNDYEIIPGDPTKTIEESEKYGNL 452
                                     Y  +  +      YE    D +K IE   K+ + 
Sbjct: 264 ------------------------HAYYDRGNAYCEKGSYEEAIKDYSKAIELDGKFAHA 299

Query: 453 ENESGQKHA-ASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIA 511
            +  G  +     + +A  D  +A ++D      Y  RG  Y   G +E++  + +  + 
Sbjct: 300 YHNRGNAYCEKGSYEEAIKDYSQAIELDDKYILGYNGRGVAYYEIGDFEKSQADFNTVLY 359

Query: 512 L 512
           L
Sbjct: 360 L 360


>gi|300870119|ref|YP_003784990.1| hypothetical protein BP951000_0486 [Brachyspira pilosicoli 95/1000]
 gi|300687818|gb|ADK30489.1| hypothetical protein BP951000_0486 [Brachyspira pilosicoli 95/1000]
          Length = 616

 Score = 86.7 bits (213), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 98/412 (23%), Positives = 183/412 (44%), Gaps = 21/412 (5%)

Query: 116 KAIEDLTQLVEDTSVDPKIKVNAHIKRAVVHLHAASDFTKAFADLDEAEKVDPNVADSYY 175
           +AIED  +++E   +DP   ++A+  R V   +    F +A  D ++  +++PN   +Y 
Sbjct: 211 EAIEDYNKVIE---LDPN-NIDAYNNRGVSKNYLQL-FDEAIKDFNKILELEPNNYCAYS 265

Query: 176 QRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQRHFVVHKMIVPGDRERVEQSLKEFR 235
            RG      G Y+EA+ + +K I +NPN+  A   R     ++ +       +++++++ 
Sbjct: 266 NRGNSKNDLGLYKEAIEDYNKAIEINPNYSDAYYNRGNSKKELGL------FKEAIEDYD 319

Query: 236 NFVDTHSNVVEACTLFAQVLVDQEDFDGAEEYFNRSIRVDPENASLYVHRAMLMLQARGN 295
           N +    N +           D E ++ A + +++ I++D      Y +RA    +  G 
Sbjct: 320 NAIKWEPNNINTYLNRGNAKYDLELYEEAIKDYDKIIKLDTNYVDAYYNRANAKREL-GL 378

Query: 296 VDEAIKLIEKAISIDKSCMFAYETLGTIEVQRGRLEEAVKCFNKALPLARDEAELSHIYS 355
             E+IK  +KAI ++ +   AY   G  +   G  EEA+K + +++ L  D  E  +   
Sbjct: 379 YKESIKDYDKAIYLNPNYSDAYNNRGLAKSDLGMYEEAIKDYEESIDLCADNPEAYYNIG 438

Query: 356 LRDAAIAQMKVCERYNIKK-KVSPRSQNITKNEKLAIKQL---RENNDIIIRPADKGGKT 411
                +  +K   +Y  K  ++ P       N  L+   L   +E     ++  DK  + 
Sbjct: 439 SAKYDLDLLKESIKYYDKAIELRPTYSEAYNNRGLSKNDLGLYKE----ALKDYDKSIEL 494

Query: 412 VVMDKADYTQKMTSILNSNDYEIIPGDPTKTIEESEKYGN-LENESGQKHAASDFTKAFA 470
              D   Y  +  +  +   Y+    D TK IE +  Y N   N    K     + +A  
Sbjct: 495 NPNDSNTYNNRGLTKYSLGLYKEAIKDYTKAIELTPDYTNAYGNRGSAKDELGQYQEAIE 554

Query: 471 DLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQ 522
           D D+A +++PN A  Y  RG +    G Y+EA ++  K + L+PN   A++ 
Sbjct: 555 DYDKAIELEPNTAYLYNDRGWVKKNAGLYKEAFKDYKKALELDPNNEYAKSN 606



 Score = 70.1 bits (170), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 102/429 (23%), Positives = 177/429 (41%), Gaps = 56/429 (13%)

Query: 153 FTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQRH 212
           F KA  D D+A ++  N  D+YY RG      G ++EA+ + +K I L+PN   A   R 
Sbjct: 175 FKKAIKDYDKAIELSKNYKDAYYNRGFAKNNAGLHKEAIEDYNKVIELDPNNIDAYNNRG 234

Query: 213 FVVHKMIVPGDRERVEQSLKEFRNFVDTHSNVVEACTLFAQVLVDQEDFDGAEEYFNRSI 272
              + +      +  ++++K+F   ++   N   A +       D   +  A E +N++I
Sbjct: 235 VSKNYL------QLFDEAIKDFNKILELEPNNYCAYSNRGNSKNDLGLYKEAIEDYNKAI 288

Query: 273 RVDPENASLYVHRA------MLMLQA--------------------RGNV-------DEA 299
            ++P  +  Y +R        L  +A                    RGN        +EA
Sbjct: 289 EINPNYSDAYYNRGNSKKELGLFKEAIEDYDNAIKWEPNNINTYLNRGNAKYDLELYEEA 348

Query: 300 IKLIEKAISIDKSCMFAYETLGTIEVQRGRLEEAVKCFNKALPLARDEAELSHIYSLRDA 359
           IK  +K I +D + + AY      + + G  +E++K ++KA+ L       S  Y+ R  
Sbjct: 349 IKDYDKIIKLDTNYVDAYYNRANAKRELGLYKESIKDYDKAIYL---NPNYSDAYNNRGL 405

Query: 360 AIAQMKVCERYNIKK--------KVSPRSQNITKNEKLAIKQLRENNDIIIRPADKGGKT 411
           A + + + E   IK           +P +     + K  +  L+E+    I+  DK  + 
Sbjct: 406 AKSDLGMYEE-AIKDYEESIDLCADNPEAYYNIGSAKYDLDLLKES----IKYYDKAIEL 460

Query: 412 VVMDKADYTQKMTSILNSNDYEIIPGDPTKTIEESEKYGNLENESG-QKHAASDFTKAFA 470
                  Y  +  S  +   Y+    D  K+IE +    N  N  G  K++   + +A  
Sbjct: 461 RPTYSEAYNNRGLSKNDLGLYKEALKDYDKSIELNPNDSNTYNNRGLTKYSLGLYKEAIK 520

Query: 471 DLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQRHFVWTST 530
           D  +A ++ P+  ++Y  RG      GQY+EA+ + DK I L PN       R +V  + 
Sbjct: 521 DYTKAIELTPDYTNAYGNRGSAKDELGQYQEAIEDYDKAIELEPNTAYLYNDRGWVKKNA 580

Query: 531 LAELMAFSD 539
                AF D
Sbjct: 581 GLYKEAFKD 589



 Score = 54.7 bits (130), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 53/216 (24%), Positives = 98/216 (45%), Gaps = 18/216 (8%)

Query: 116 KAIEDLTQLVEDTSVDPKIKVNAHIKRAVVHLHAASDFTKAFADLDEAEKVDPNVADSYY 175
           +AI+D  + ++  + +P+   N  I  A   L    +  K +   D+A ++ P  +++Y 
Sbjct: 415 EAIKDYEESIDLCADNPEAYYN--IGSAKYDLDLLKESIKYY---DKAIELRPTYSEAYN 469

Query: 176 QRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQRHFVVHKMIVPGDRERVEQSLKEFR 235
            RG      G Y+EAL++ DK+I LNPN       R    + + +   +E ++   K   
Sbjct: 470 NRGLSKNDLGLYKEALKDYDKSIELNPNDSNTYNNRGLTKYSLGLY--KEAIKDYTKAIE 527

Query: 236 ---NFVDTHSNVVEACTLFAQVLVDQEDFDGAEEYFNRSIRVDPENASLYVHRAMLMLQA 292
              ++ + + N   A     Q     ED+D       ++I ++P  A LY  R  +   A
Sbjct: 528 LTPDYTNAYGNRGSAKDELGQYQEAIEDYD-------KAIELEPNTAYLYNDRGWVKKNA 580

Query: 293 RGNVDEAIKLIEKAISIDKSCMFAYETLGTIEVQRG 328
            G   EA K  +KA+ +D +  +A   +  ++ +RG
Sbjct: 581 -GLYKEAFKDYKKALELDPNNEYAKSNIANLKKERG 615



 Score = 50.4 bits (119), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 78/347 (22%), Positives = 128/347 (36%), Gaps = 88/347 (25%)

Query: 173 SYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQRHFVVHKMIVPGDRERVEQSLK 232
           +YY RG      G +++A+++ DK I L+ N+  A   R F                   
Sbjct: 161 AYYNRGLARSNLGFFKKAIKDYDKAIELSKNYKDAYYNRGFA------------------ 202

Query: 233 EFRNFVDTHSNVVEACTLFAQVLVDQEDFDGAEEYFNRSIRVDPENASLYVHRAML--ML 290
             +N    H   +E                     +N+ I +DP N   Y +R +    L
Sbjct: 203 --KNNAGLHKEAIED--------------------YNKVIELDPNNIDAYNNRGVSKNYL 240

Query: 291 QARGNVDEAIKLIEKAISIDKSCMFAYETLGTIEVQRGRLEEAVKCFNKALPLARDEAEL 350
           Q     DEAIK   K + ++ +   AY   G  +   G  +EA++ +NKA+ +       
Sbjct: 241 QL---FDEAIKDFNKILELEPNNYCAYSNRGNSKNDLGLYKEAIEDYNKAIEI---NPNY 294

Query: 351 SHIYSLRDAAIAQM----KVCERYNIKKKVSPRSQNITKNEKLAIKQLRENNDIIIRPAD 406
           S  Y  R  +  ++    +  E Y+   K  P + N   N   A   L      +   A 
Sbjct: 295 SDAYYNRGNSKKELGLFKEAIEDYDNAIKWEPNNINTYLNRGNAKYDLE-----LYEEAI 349

Query: 407 KGGKTVVMDKADYTQKMTSILNSNDYEIIPGDPTKTIEESEKYGNLENESG-QKHAASDF 465
           K                       DY+ I    T  ++      N + E G  K +  D+
Sbjct: 350 K-----------------------DYDKIIKLDTNYVDAYYNRANAKRELGLYKESIKDY 386

Query: 466 TKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIAL 512
            KA         ++PN +D+Y  RG      G YEEA+++ +++I L
Sbjct: 387 DKAIY-------LNPNYSDAYNNRGLAKSDLGMYEEAIKDYEESIDL 426



 Score = 48.5 bits (114), Expect = 0.009,   Method: Compositional matrix adjust.
 Identities = 63/274 (22%), Positives = 113/274 (41%), Gaps = 24/274 (8%)

Query: 256 VDQEDFDGAEEYFNRSIRVDPENASLYVHRAMLMLQARGNVDEAIKLIEKAISIDKSCMF 315
           +D  D D  +EYF+              +   + L   G+   AI    +AI +      
Sbjct: 114 IDINDLDTLDEYFD-------------CNTNGVALNNMGSYQYAIDKYSEAIDLIDYYAL 160

Query: 316 AYETLGTIEVQRGRLEEAVKCFNKALPLARD--EAELSHIYSLRDAAIAQMKVCERYNIK 373
           AY   G      G  ++A+K ++KA+ L+++  +A  +  ++  +A + + +  E YN  
Sbjct: 161 AYYNRGLARSNLGFFKKAIKDYDKAIELSKNYKDAYYNRGFAKNNAGLHK-EAIEDYNKV 219

Query: 374 KKVSPRSQNITKNEKLAIKQLRENNDIIIRPADKGGKTVVMDKADYTQKMTSILNSND-- 431
            ++ P + +   N  ++   L+    +         K + ++  +Y        + ND  
Sbjct: 220 IELDPNNIDAYNNRGVSKNYLQ----LFDEAIKDFNKILELEPNNYCAYSNRGNSKNDLG 275

Query: 432 -YEIIPGDPTKTIEESEKYGN-LENESGQKHAASDFTKAFADLDEAEKVDPNVADSYYQR 489
            Y+    D  K IE +  Y +   N    K     F +A  D D A K +PN  ++Y  R
Sbjct: 276 LYKEAIEDYNKAIEINPNYSDAYYNRGNSKKELGLFKEAIEDYDNAIKWEPNNINTYLNR 335

Query: 490 GQIYCLFGQYEEALRNLDKTIALNPNFHVARAQR 523
           G        YEEA+++ DK I L+ N+  A   R
Sbjct: 336 GNAKYDLELYEEAIKDYDKIIKLDTNYVDAYYNR 369


>gi|113475981|ref|YP_722042.1| hypothetical protein Tery_2349 [Trichodesmium erythraeum IMS101]
 gi|110167029|gb|ABG51569.1| TPR repeat [Trichodesmium erythraeum IMS101]
          Length = 649

 Score = 86.7 bits (213), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 88/354 (24%), Positives = 161/354 (45%), Gaps = 61/354 (17%)

Query: 148 HAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVA 207
           H   +F +A AD ++A +++P  AD+Y  RG +Y   G+Y+ AL +L++ I LNP +  A
Sbjct: 301 HDREEFEQALADYNQAIQLNPKYADAYNNRGIVYRKQGKYDLALADLNQAIQLNPKYADA 360

Query: 208 RAQRHFVVHKMIVPGDRERVEQSLKEFRNFVDTHSNVVEACTLFAQVLVDQEDFDGAEEY 267
              R  V +      ++ + + +L ++   +  +    EA      V  DQ  +D A   
Sbjct: 361 YKNRGNVYY------NQGKYDLALADYNQAIQLNPKYAEAYNNRGLVYDDQGKYDLAIAE 414

Query: 268 FNRSIRVDPENASLYVHRAMLMLQARGNVDEAIKLIEKAISIDKSCMFAYETLGTIEVQR 327
           FN++I+++P+ A  Y +R ++    +G  D A+    +AI ++     AY   G + +++
Sbjct: 415 FNQAIQLNPKYAYAYNNRGVVY-DDQGKYDLALADYNQAIQLNPKYAEAYNNRGGVYLEQ 473

Query: 328 GRLEEAVKCFNKALPLARDEAELSHIYSLRDAAIAQMKVCERYNIKKKVSPRSQNITKNE 387
           G+ + A+  +N+A+ L                     K+ E YN +  V  R Q      
Sbjct: 474 GKYDLAIADYNQAIQL-------------------NPKLAEAYNNRGAVY-RKQG---KY 510

Query: 388 KLAI----KQLRENNDIIIRPADKGGKTVVMDK-------ADYTQKMTSILNSNDYEIIP 436
            LA+    + +R NN  +  P +  G  V  D+       ADY+Q +         ++ P
Sbjct: 511 DLALADYNESIRLNNPQLWLPYNNRG-LVYNDQRKYDLALADYSQAI---------QLNP 560

Query: 437 GDPTKTIEESEKYGNLENESGQKHAASDFTKAFADLDEAEKVDPNVADSYYQRG 490
            D           GN+ ++ G+      +  A AD  +A +++P  A++YY RG
Sbjct: 561 KDAYAYYNR----GNVYDDQGK------YDLAIADYSQAIQLNPKYANAYYTRG 604



 Score = 51.6 bits (122), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 33/98 (33%), Positives = 54/98 (55%), Gaps = 5/98 (5%)

Query: 443 IEESEKYGNLENESGQKHA-ASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEE 501
           I+ +E Y     E G KH    +F +A AD ++A +++P  AD+Y  RG +Y   G+Y+ 
Sbjct: 287 IQNAESY----YEQGDKHHDREEFEQALADYNQAIQLNPKYADAYNNRGIVYRKQGKYDL 342

Query: 502 ALRNLDKTIALNPNFHVARAQRHFVWTSTLAELMAFSD 539
           AL +L++ I LNP +  A   R  V+ +     +A +D
Sbjct: 343 ALADLNQAIQLNPKYADAYKNRGNVYYNQGKYDLALAD 380



 Score = 50.8 bits (120), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 31/93 (33%), Positives = 50/93 (53%), Gaps = 5/93 (5%)

Query: 438 DPTKTIEESEKYGNLENESG---QKHAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYC 494
           D  + I+ + KY +  N  G   +K    D   A ADL++A +++P  AD+Y  RG +Y 
Sbjct: 312 DYNQAIQLNPKYADAYNNRGIVYRKQGKYDL--ALADLNQAIQLNPKYADAYKNRGNVYY 369

Query: 495 LFGQYEEALRNLDKTIALNPNFHVARAQRHFVW 527
             G+Y+ AL + ++ I LNP +  A   R  V+
Sbjct: 370 NQGKYDLALADYNQAIQLNPKYAEAYNNRGLVY 402



 Score = 44.7 bits (104), Expect = 0.11,   Method: Compositional matrix adjust.
 Identities = 28/109 (25%), Positives = 54/109 (49%), Gaps = 1/109 (0%)

Query: 432 YEIIPGDPTKTIEESEKYGN-LENESGQKHAASDFTKAFADLDEAEKVDPNVADSYYQRG 490
           Y++   D  + I+ + KY +  +N     +    +  A AD ++A +++P  A++Y  RG
Sbjct: 340 YDLALADLNQAIQLNPKYADAYKNRGNVYYNQGKYDLALADYNQAIQLNPKYAEAYNNRG 399

Query: 491 QIYCLFGQYEEALRNLDKTIALNPNFHVARAQRHFVWTSTLAELMAFSD 539
            +Y   G+Y+ A+   ++ I LNP +  A   R  V+       +A +D
Sbjct: 400 LVYDDQGKYDLAIAEFNQAIQLNPKYAYAYNNRGVVYDDQGKYDLALAD 448



 Score = 41.6 bits (96), Expect = 1.1,   Method: Compositional matrix adjust.
 Identities = 22/72 (30%), Positives = 39/72 (54%)

Query: 468 AFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQRHFVW 527
           A AD ++A +++P  A++Y  RG +Y   G+Y+ A+ + ++ I LNP    A   R  V+
Sbjct: 445 ALADYNQAIQLNPKYAEAYNNRGGVYLEQGKYDLAIADYNQAIQLNPKLAEAYNNRGAVY 504

Query: 528 TSTLAELMAFSD 539
                  +A +D
Sbjct: 505 RKQGKYDLALAD 516


>gi|225621426|ref|YP_002722685.1| TPR domain-containing protein [Brachyspira hyodysenteriae WA1]
 gi|225216247|gb|ACN84981.1| putative TPR domain-containing protein [Brachyspira hyodysenteriae
           WA1]
          Length = 817

 Score = 86.7 bits (213), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 108/461 (23%), Positives = 194/461 (42%), Gaps = 67/461 (14%)

Query: 119 EDLTQLVEDTSVDPKIKVNAHIKRAVVHLHAASDFTKAFADLDEAEKVDPNVADSYYQ-- 176
           E L  L +   ++P   ++A+   A   LH      +A   L++A ++ PN AD+Y++  
Sbjct: 297 ESLEYLKKALEINPNF-IDAYYDIAFA-LHKLDLNNEALEYLEKALQIYPNSADTYFKMF 354

Query: 177 ---------RGQIYCL-----------------------FGQYEEALRNLDKTIALNPNF 204
                     G + CL                          Y+EAL  L+K + ++ N 
Sbjct: 355 LVKRALRDYEGALSCLNKILEIDNTDVSIYNEIALIKIELELYDEALYYLNKALDIDTNN 414

Query: 205 HVARAQRHFVVHKMIVPGDRERVEQSLKEFRNFVDTHSNVVEACTLFAQVLVDQEDFDGA 264
                    V H       ++  E++++ F   ++ ++++  A         +  D++ +
Sbjct: 415 AEIYNSIGLVYHY------KKNYEEAIRNFNKAIELNTSMASAYYNIGLAYYEMHDYENS 468

Query: 265 EEYFNRSIRVDPENASLYVHRAMLMLQARGNVDEAIKLIEKAISIDKSCMFAYETLGTIE 324
            +Y+N+++ ++P+ AS Y++   L+    GN  EAI   +KA+ I+     AY  +   E
Sbjct: 469 IQYYNKALEINPQYASAYINLG-LIKHNLGNYKEAIDYYKKALEINPDYSLAYYNIALAE 527

Query: 325 VQRGRLEEAVKCFNKALPLARDEAE----LSHIYSLRDAAIAQMKVCERYNIKKKVSPRS 380
           +     + +++ FNKAL L  DEAE    +  IYS R A     K  E YN   +++P  
Sbjct: 528 MSLEDYKNSLEDFNKALELGYDEAEIYINIGLIYS-RQAVYD--KAIEYYNKVLEINPNK 584

Query: 381 QNITKNEKLAIKQLR------ENNDIIIRPADKGGKTVVMDKADYTQKMTSILNSNDYEI 434
            N   N   ++  +       E  D +IR    G   V  ++  YT+   S      YE 
Sbjct: 585 VNAYYNIAFSLSNMDKYEEALEIYDKVIRMY-PGNFDVYYERG-YTKYRAS-----KYEE 637

Query: 435 IPGDPTKTIEESEKYGNLENESG-QKHAASDFTKAFADLDEAEKVDPNVADSYYQRGQIY 493
              D    I  + K+ N     G  K    ++  A  D D+A + + N +D Y +R   Y
Sbjct: 638 AVRDFDIIINVNSKHYNAYYYRGCSKKYLKNYDGAIKDFDKAIEYNANNSDFYSERASCY 697

Query: 494 CLFGQYEEALRNLDKTIALNPN---FHVARAQRHFVWTSTL 531
               +Y E++ N DK I L  +    ++ RA+  F+ +  +
Sbjct: 698 DYLNKYRESVENYDKAIELKDDDWFLYILRAKEKFLLSKEI 738



 Score = 77.4 bits (189), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 121/489 (24%), Positives = 210/489 (42%), Gaps = 88/489 (17%)

Query: 63  DLLSKAKRAFEHEDYLTAIRHCTEEI----ESTSSNHTKALARL-LRA------------ 105
           +LL+KAK AFE+++Y  +I +  + I    +S    H + L++L LR             
Sbjct: 7   ELLNKAKDAFENKEYEKSIEYIDKVIFYNGDSYDLYHNRGLSKLNLRLYEEAIKDFERAI 66

Query: 106 -------TVY-------IFTSQSTKAIEDLTQLVEDTSVDPKIKVNAHIKRAVVHLHAAS 151
                  TVY       ++     +AIED  ++++  + D   +VN      + +L+   
Sbjct: 67  ELGDDSETVYYDRGLAKLYLGNYEEAIEDFKRVLKINNNDTDSRVNI----GLCYLYMKK 122

Query: 152 DFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQR 211
            + +A    DE     P+   SY  RG       Q+EEA+ + +K I L+ N   + A  
Sbjct: 123 -YKEAINIYDEVIANFPDNISSYNNRGLCKFYLSQFEEAINDFNKVIELDKNDTSSSAYN 181

Query: 212 HFVVHKMIVPGDRERVEQSLKEFRNFVDTHSNVVEACTLFA----QVLVDQEDFDGAEEY 267
              + K     +    +++LK +   ++ + N++ A    A     V +D E    A  Y
Sbjct: 182 TIGLCKY----NLNEFDEALKCYEKAIEINPNLISAYNNIALIKHSVGLDYE----ALSY 233

Query: 268 FNRSIRVDPENASLYVHRAMLMLQARGNVDEAIKLIEKAISIDKSCMFAYETLGTIEVQR 327
            N+++ +DP N   Y+    + L+  G  +EA + + K I +    ++ Y+ +G I++  
Sbjct: 234 LNKALEIDPNNIETYLKIYSIKLEL-GLENEANEYLNKIIEMHPDDIYVYDRIGNIKIDA 292

Query: 328 GRLEEAVKCFNKALPLARDEAELSHIYSLRDAAIAQMKVCERYNIKKKVSPRSQNITKNE 387
           G +EE+++   KAL     E   + I +  D A A  K+                   NE
Sbjct: 293 GYMEESLEYLKKAL-----EINPNFIDAYYDIAFALHKLD----------------LNNE 331

Query: 388 KLAIKQLRENNDIIIRPADKGGKTVVMDKA--DYTQKMTSILNSNDYEIIPGDPTKTIEE 445
             A++ L +   I    AD   K  ++ +A  DY   + S LN    +I+  D T     
Sbjct: 332 --ALEYLEKALQIYPNSADTYFKMFLVKRALRDYEGAL-SCLN----KILEIDNTDV--- 381

Query: 446 SEKYGNLENESGQ-KHAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALR 504
                ++ NE    K     + +A   L++A  +D N A+ Y   G +Y     YEEA+R
Sbjct: 382 -----SIYNEIALIKIELELYDEALYYLNKALDIDTNNAEIYNSIGLVYHYKKNYEEAIR 436

Query: 505 NLDKTIALN 513
           N +K I LN
Sbjct: 437 NFNKAIELN 445


>gi|384208241|ref|YP_005593961.1| hypothetical protein Bint_0752 [Brachyspira intermedia PWS/A]
 gi|343385891|gb|AEM21381.1| hypothetical protein Bint_0752 [Brachyspira intermedia PWS/A]
          Length = 617

 Score = 85.9 bits (211), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 96/381 (25%), Positives = 166/381 (43%), Gaps = 62/381 (16%)

Query: 153 FTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQRH 212
           + +A  D ++A K++PN AD+YY RG      G ++EA+ + +  I   PN   +   R 
Sbjct: 277 YKEAIEDYNKALKINPNFADAYYNRGNSKKELGLFKEAIEDYNNAIKWKPNDINSYMNRG 336

Query: 213 FVVHKMIVPGDRERVEQSLKEF-------RNFVDTHSNVVEA---CTLFAQVLVDQEDFD 262
            V +      D E  E+++K++        N+VD + N   A     L+ + + D     
Sbjct: 337 NVKY------DLELYEEAIKDYDKIIKLDHNYVDAYYNRANAKRELGLYKESIKD----- 385

Query: 263 GAEEYFNRSIRVDPENASLYVHRAMLMLQARGNVDEAIKLIEKAISIDKSCMFAYETLGT 322
                ++++I ++P  +  Y +R  L     G  +EAIK  E++I +      AY  +G+
Sbjct: 386 -----YDKAIYLNPNYSDAYNNRG-LAKSDLGMYEEAIKDYEESIDLCADNPEAYYNIGS 439

Query: 323 IEVQRGRLEEAVKCFNKALPLARDEAELSHIYSLRDAAIAQMKVCERYNIKKKVSPRSQN 382
            +     L+E++K ++KA+       EL   YS            E YN        ++ 
Sbjct: 440 AKYDLDLLKESIKYYDKAI-------ELRPTYS------------EAYN--------NRG 472

Query: 383 ITKNEKLAIKQLRENNDIIIRPADKGGKTVVMDKADYTQKMTSILNSNDYEIIPGDPTKT 442
           ++KN+    K+        I+  DK  +    D   Y  +  +      Y+    D TK 
Sbjct: 473 LSKNDLGLYKE-------AIKDYDKSIELNPNDSNTYNNRGLTKYTLGLYKEAIKDYTKA 525

Query: 443 IEESEKYGN-LENESGQKHAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEE 501
           IE +  Y N   N    K     + +A  D D+A +++PN A  Y  RG +    G Y+E
Sbjct: 526 IELTPNYTNAYGNRGSAKDELGQYKEAIKDYDKAIELEPNTAYLYNDRGWVKKNAGLYKE 585

Query: 502 ALRNLDKTIALNPNFHVARAQ 522
           AL++  K + L+PN   A + 
Sbjct: 586 ALKDYKKALELDPNNKYAMSN 606



 Score = 79.0 bits (193), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 98/411 (23%), Positives = 179/411 (43%), Gaps = 47/411 (11%)

Query: 117 AIEDLTQLVEDTSVDPKIKVNAHIKRAVVHLHAASDFTKAFADLDEAEKVDPNVADSYYQ 176
           AIED  +++E   +D K  ++A+  R     +    F +A  D ++  +++PN   +Y  
Sbjct: 212 AIEDYNKVIE---LDNK-NIDAYNNRGASKNYLQL-FDEAMKDFNKILELEPNNYCAYSN 266

Query: 177 RGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQRHFVVHKMIVPGDRERVEQSLKEFRN 236
           RG      G Y+EA+ + +K + +NPNF  A   R     ++ +       +++++++ N
Sbjct: 267 RGNSKNDLGLYKEAIEDYNKALKINPNFADAYYNRGNSKKELGL------FKEAIEDYNN 320

Query: 237 FVDTHSNVVEACTLFAQVLVDQEDFDGAEEYFNRSIRVDPENASLYVHRAMLMLQARGNV 296
            +    N + +      V  D E ++ A + +++ I++D      Y +RA    +  G  
Sbjct: 321 AIKWKPNDINSYMNRGNVKYDLELYEEAIKDYDKIIKLDHNYVDAYYNRANAKREL-GLY 379

Query: 297 DEAIKLIEKAISIDKSCMFAYETLGTIEVQRGRLEEAVKCFNKALPLARDEAELSHIYSL 356
            E+IK  +KAI ++ +   AY   G  +   G  EEA+K + +++ L  D  E  +    
Sbjct: 380 KESIKDYDKAIYLNPNYSDAYNNRGLAKSDLGMYEEAIKDYEESIDLCADNPEAYYNIGS 439

Query: 357 RDAAIAQMKVCERYNIKKKVSPRSQNITKNEKLAIKQLRENNDIIIRPADKGGKTVVMDK 416
               +  +K   +Y   K +  R    T +E    + L +N+  + + A K         
Sbjct: 440 AKYDLDLLKESIKY-YDKAIELRP---TYSEAYNNRGLSKNDLGLYKEAIK--------- 486

Query: 417 ADYTQKMTSILNSNDYEIIPGDPTKTIEESEKYGNLENESG-QKHAASDFTKAFADLDEA 475
            DY + +   LN ND                   N  N  G  K+    + +A  D  +A
Sbjct: 487 -DYDKSIE--LNPND------------------SNTYNNRGLTKYTLGLYKEAIKDYTKA 525

Query: 476 EKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQRHFV 526
            ++ PN  ++Y  RG      GQY+EA+++ DK I L PN       R +V
Sbjct: 526 IELTPNYTNAYGNRGSAKDELGQYKEAIKDYDKAIELEPNTAYLYNDRGWV 576



 Score = 75.5 bits (184), Expect = 8e-11,   Method: Compositional matrix adjust.
 Identities = 62/242 (25%), Positives = 111/242 (45%), Gaps = 11/242 (4%)

Query: 105 ATVYIFTSQSTKAIEDLTQLVEDTSVDPKIK---VNAHIKRAVVHLHAASDFTKAFADLD 161
           A  Y     S K +    + +ED +   K K   +N+++ R  V  +    + +A  D D
Sbjct: 295 ADAYYNRGNSKKELGLFKEAIEDYNNAIKWKPNDINSYMNRGNVK-YDLELYEEAIKDYD 353

Query: 162 EAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQRHFVVHKMIVP 221
           +  K+D N  D+YY R       G Y+E++++ DK I LNPN+  A   R       +  
Sbjct: 354 KIIKLDHNYVDAYYNRANAKRELGLYKESIKDYDKAIYLNPNYSDAYNNRG------LAK 407

Query: 222 GDRERVEQSLKEFRNFVDTHSNVVEACTLFAQVLVDQEDFDGAEEYFNRSIRVDPENASL 281
            D    E+++K++   +D  ++  EA         D +    + +Y++++I + P  +  
Sbjct: 408 SDLGMYEEAIKDYEESIDLCADNPEAYYNIGSAKYDLDLLKESIKYYDKAIELRPTYSEA 467

Query: 282 YVHRAMLMLQARGNVDEAIKLIEKAISIDKSCMFAYETLGTIEVQRGRLEEAVKCFNKAL 341
           Y +R  L     G   EAIK  +K+I ++ +    Y   G  +   G  +EA+K + KA+
Sbjct: 468 YNNRG-LSKNDLGLYKEAIKDYDKSIELNPNDSNTYNNRGLTKYTLGLYKEAIKDYTKAI 526

Query: 342 PL 343
            L
Sbjct: 527 EL 528



 Score = 51.2 bits (121), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 51/215 (23%), Positives = 97/215 (45%), Gaps = 18/215 (8%)

Query: 117 AIEDLTQLVEDTSVDPKIKVNAHIKRAVVHLHAASDFTKAFADLDEAEKVDPNVADSYYQ 176
           AI+D  + ++  + +P+   N  I  A   L    +  K +   D+A ++ P  +++Y  
Sbjct: 416 AIKDYEESIDLCADNPEAYYN--IGSAKYDLDLLKESIKYY---DKAIELRPTYSEAYNN 470

Query: 177 RGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQRHFVVHKMIVPGDRERVEQSLKEFR- 235
           RG      G Y+EA+++ DK+I LNPN       R    + + +   +E ++   K    
Sbjct: 471 RGLSKNDLGLYKEAIKDYDKSIELNPNDSNTYNNRGLTKYTLGLY--KEAIKDYTKAIEL 528

Query: 236 --NFVDTHSNVVEACTLFAQVLVDQEDFDGAEEYFNRSIRVDPENASLYVHRAMLMLQAR 293
             N+ + + N   A     Q     +D+D       ++I ++P  A LY  R  +   A 
Sbjct: 529 TPNYTNAYGNRGSAKDELGQYKEAIKDYD-------KAIELEPNTAYLYNDRGWVKKNA- 580

Query: 294 GNVDEAIKLIEKAISIDKSCMFAYETLGTIEVQRG 328
           G   EA+K  +KA+ +D +  +A   +  ++ + G
Sbjct: 581 GLYKEALKDYKKALELDPNNKYAMSNIENLKKEHG 615



 Score = 49.7 bits (117), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 46/174 (26%), Positives = 82/174 (47%), Gaps = 17/174 (9%)

Query: 173 SYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVAR-----AQRHFVVHKMIVPGDRERV 227
           +YY RG      G +++A+++ DK I L+ N+  A      A+ H  +HK  +    + +
Sbjct: 161 AYYNRGLARNNLGFFKKAIKDYDKAIELSKNYKDAYYNRGVAKNHAGLHKEAIEDYNKVI 220

Query: 228 EQSLKEFRNFVDTHSNVVEACTLFAQVLVDQEDFDGAEEYFNRSIRVDPENASLYVHRAM 287
           E   K     +D ++N   A   + Q+      FD A + FN+ + ++P N   Y +R  
Sbjct: 221 ELDNKN----IDAYNNRG-ASKNYLQL------FDEAMKDFNKILELEPNNYCAYSNRGN 269

Query: 288 LMLQARGNVDEAIKLIEKAISIDKSCMFAYETLGTIEVQRGRLEEAVKCFNKAL 341
                 G   EAI+   KA+ I+ +   AY   G  + + G  +EA++ +N A+
Sbjct: 270 SK-NDLGLYKEAIEDYNKALKINPNFADAYYNRGNSKKELGLFKEAIEDYNNAI 322



 Score = 39.7 bits (91), Expect = 4.6,   Method: Compositional matrix adjust.
 Identities = 56/239 (23%), Positives = 103/239 (43%), Gaps = 5/239 (2%)

Query: 288 LMLQARGNVDEAIKLIEKAISIDKSCMFAYETLGTIEVQRGRLEEAVKCFNKALPLARDE 347
           + L   G+   AI    +AI +      AY   G      G  ++A+K ++KA+ L+++ 
Sbjct: 133 VALNNMGSYQYAIDKYSEAIDLIDYYALAYYNRGLARNNLGFFKKAIKDYDKAIELSKNY 192

Query: 348 AELSHIYSL-RDAAIAQMKVCERYNIKKKVSPRSQNI-TKNEKLAIKQLRENNDIIIRPA 405
            +  +   + ++ A    +  E YN  K +   ++NI   N + A K   +  D  ++  
Sbjct: 193 KDAYYNRGVAKNHAGLHKEAIEDYN--KVIELDNKNIDAYNNRGASKNYLQLFDEAMKDF 250

Query: 406 DKGGKTVVMDKADYTQKMTSILNSNDYEIIPGDPTKTIEESEKYGN-LENESGQKHAASD 464
           +K  +    +   Y+ +  S  +   Y+    D  K ++ +  + +   N    K     
Sbjct: 251 NKILELEPNNYCAYSNRGNSKNDLGLYKEAIEDYNKALKINPNFADAYYNRGNSKKELGL 310

Query: 465 FTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQR 523
           F +A  D + A K  PN  +SY  RG +      YEEA+++ DK I L+ N+  A   R
Sbjct: 311 FKEAIEDYNNAIKWKPNDINSYMNRGNVKYDLELYEEAIKDYDKIIKLDHNYVDAYYNR 369


>gi|431806834|ref|YP_007233732.1| hypothetical protein BPP43_00585 [Brachyspira pilosicoli P43/6/78]
 gi|430780193|gb|AGA65477.1| hypothetical protein BPP43_00585 [Brachyspira pilosicoli P43/6/78]
          Length = 616

 Score = 85.9 bits (211), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 98/411 (23%), Positives = 183/411 (44%), Gaps = 21/411 (5%)

Query: 117 AIEDLTQLVEDTSVDPKIKVNAHIKRAVVHLHAASDFTKAFADLDEAEKVDPNVADSYYQ 176
           AIED  +++E   +DP   ++A+  R V   +    F +A  D ++  +++PN   +Y  
Sbjct: 212 AIEDYNKVIE---LDPN-NIDAYNNRGVSKNYLEL-FDEAIKDFNKILELEPNNYCAYSN 266

Query: 177 RGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQRHFVVHKMIVPGDRERVEQSLKEFRN 236
           RG      G Y+EA+ + +K I +NPN+  A   R     ++ +       +++++++ N
Sbjct: 267 RGNSKNDLGLYKEAIEDYNKAIEINPNYSDAYYNRGNSKKELGL------FKEAIEDYDN 320

Query: 237 FVDTHSNVVEACTLFAQVLVDQEDFDGAEEYFNRSIRVDPENASLYVHRAMLMLQARGNV 296
            +    N +           D E ++ A + +++ I++D      Y +RA    +  G  
Sbjct: 321 AIKWEPNNINTYLNRGNAKYDLELYEEAIKDYDKIIKLDTNYVDAYYNRANAKREL-GLY 379

Query: 297 DEAIKLIEKAISIDKSCMFAYETLGTIEVQRGRLEEAVKCFNKALPLARDEAELSHIYSL 356
            E+IK  +KAI ++ +   AY   G  +   G  EEA+K + +++ L  D  E  +    
Sbjct: 380 KESIKDYDKAIYLNPNYSDAYNNRGLAKSDLGMYEEAIKDYEESIDLCADNPEAYYNIGS 439

Query: 357 RDAAIAQMKVCERYNIKK-KVSPRSQNITKNEKLAIKQL---RENNDIIIRPADKGGKTV 412
               +  +K   +Y  K  ++ P       N  L+   L   +E     ++  DK  +  
Sbjct: 440 AKYDLDLLKESIKYYDKAIELRPTYSEAYNNRGLSKNDLGLYKE----ALKDYDKSIELN 495

Query: 413 VMDKADYTQKMTSILNSNDYEIIPGDPTKTIEESEKYGN-LENESGQKHAASDFTKAFAD 471
             D   Y  +  +  +   Y+    D TK I+ +  Y N   N    K     + +A  D
Sbjct: 496 PDDSNTYNNRGLTKYSLGLYKEAIKDYTKAIKLTPDYTNAYGNRGSAKDELGQYKEAIED 555

Query: 472 LDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQ 522
            D+A +++PN A  Y  RG +    G Y+EAL++  K + L+PN   A++ 
Sbjct: 556 YDKAIELEPNTAYLYNDRGWVKKNAGLYKEALKDYKKALELDPNNEYAKSN 606



 Score = 71.6 bits (174), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 101/416 (24%), Positives = 173/416 (41%), Gaps = 56/416 (13%)

Query: 153 FTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQRH 212
           F KA  D D+A ++  N  D+YY RG      G ++EA+ + +K I L+PN   A   R 
Sbjct: 175 FKKAIKDYDKAIELSKNYKDAYYNRGFAKNNAGLHKEAIEDYNKVIELDPNNIDAYNNRG 234

Query: 213 FVVHKMIVPGDRERVEQSLKEFRNFVDTHSNVVEACTLFAQVLVDQEDFDGAEEYFNRSI 272
              + +      E  ++++K+F   ++   N   A +       D   +  A E +N++I
Sbjct: 235 VSKNYL------ELFDEAIKDFNKILELEPNNYCAYSNRGNSKNDLGLYKEAIEDYNKAI 288

Query: 273 RVDPENASLYVHRA------MLMLQA--------------------RGNV-------DEA 299
            ++P  +  Y +R        L  +A                    RGN        +EA
Sbjct: 289 EINPNYSDAYYNRGNSKKELGLFKEAIEDYDNAIKWEPNNINTYLNRGNAKYDLELYEEA 348

Query: 300 IKLIEKAISIDKSCMFAYETLGTIEVQRGRLEEAVKCFNKALPLARDEAELSHIYSLRDA 359
           IK  +K I +D + + AY      + + G  +E++K ++KA+ L       S  Y+ R  
Sbjct: 349 IKDYDKIIKLDTNYVDAYYNRANAKRELGLYKESIKDYDKAIYL---NPNYSDAYNNRGL 405

Query: 360 AIAQMKVCERYNIKK--------KVSPRSQNITKNEKLAIKQLRENNDIIIRPADKGGKT 411
           A + + + E   IK           +P +     + K  +  L+E+    I+  DK  + 
Sbjct: 406 AKSDLGMYEE-AIKDYEESIDLCADNPEAYYNIGSAKYDLDLLKES----IKYYDKAIEL 460

Query: 412 VVMDKADYTQKMTSILNSNDYEIIPGDPTKTIEESEKYGNLENESG-QKHAASDFTKAFA 470
                  Y  +  S  +   Y+    D  K+IE +    N  N  G  K++   + +A  
Sbjct: 461 RPTYSEAYNNRGLSKNDLGLYKEALKDYDKSIELNPDDSNTYNNRGLTKYSLGLYKEAIK 520

Query: 471 DLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQRHFV 526
           D  +A K+ P+  ++Y  RG      GQY+EA+ + DK I L PN       R +V
Sbjct: 521 DYTKAIKLTPDYTNAYGNRGSAKDELGQYKEAIEDYDKAIELEPNTAYLYNDRGWV 576



 Score = 54.3 bits (129), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 52/215 (24%), Positives = 99/215 (46%), Gaps = 18/215 (8%)

Query: 117 AIEDLTQLVEDTSVDPKIKVNAHIKRAVVHLHAASDFTKAFADLDEAEKVDPNVADSYYQ 176
           AI+D  + ++  + +P+   N  I  A   L    +  K +   D+A ++ P  +++Y  
Sbjct: 416 AIKDYEESIDLCADNPEAYYN--IGSAKYDLDLLKESIKYY---DKAIELRPTYSEAYNN 470

Query: 177 RGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQRHFVVHKMIVPGDRERVEQSLKEFR- 235
           RG      G Y+EAL++ DK+I LNP+       R    + + +   +E ++   K  + 
Sbjct: 471 RGLSKNDLGLYKEALKDYDKSIELNPDDSNTYNNRGLTKYSLGLY--KEAIKDYTKAIKL 528

Query: 236 --NFVDTHSNVVEACTLFAQVLVDQEDFDGAEEYFNRSIRVDPENASLYVHRAMLMLQAR 293
             ++ + + N   A     Q     ED+D       ++I ++P  A LY  R  +   A 
Sbjct: 529 TPDYTNAYGNRGSAKDELGQYKEAIEDYD-------KAIELEPNTAYLYNDRGWVKKNA- 580

Query: 294 GNVDEAIKLIEKAISIDKSCMFAYETLGTIEVQRG 328
           G   EA+K  +KA+ +D +  +A   +  ++ +RG
Sbjct: 581 GLYKEALKDYKKALELDPNNEYAKSNIANLKKERG 615



 Score = 49.7 bits (117), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 41/169 (24%), Positives = 80/169 (47%), Gaps = 7/169 (4%)

Query: 173 SYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQRHFVVHKMIVPGDRERVEQSLK 232
           +YY RG      G +++A+++ DK I L+ N+  A   R F  +   +       +++++
Sbjct: 161 AYYNRGLARSNLGFFKKAIKDYDKAIELSKNYKDAYYNRGFAKNNAGLH------KEAIE 214

Query: 233 EFRNFVDTHSNVVEACTLFAQVLVDQEDFDGAEEYFNRSIRVDPENASLYVHRAMLMLQA 292
           ++   ++   N ++A           E FD A + FN+ + ++P N   Y +R       
Sbjct: 215 DYNKVIELDPNNIDAYNNRGVSKNYLELFDEAIKDFNKILELEPNNYCAYSNRGNSK-ND 273

Query: 293 RGNVDEAIKLIEKAISIDKSCMFAYETLGTIEVQRGRLEEAVKCFNKAL 341
            G   EAI+   KAI I+ +   AY   G  + + G  +EA++ ++ A+
Sbjct: 274 LGLYKEAIEDYNKAIEINPNYSDAYYNRGNSKKELGLFKEAIEDYDNAI 322



 Score = 48.5 bits (114), Expect = 0.009,   Method: Compositional matrix adjust.
 Identities = 58/229 (25%), Positives = 102/229 (44%), Gaps = 5/229 (2%)

Query: 298 EAIKLIEKAISIDKSCMFAYETLGTIEVQRGRLEEAVKCFNKALPLARD--EAELSHIYS 355
           +AI    KAI +      AY   G      G  ++A+K ++KA+ L+++  +A  +  ++
Sbjct: 143 DAIDYYSKAIDLIDYYALAYYNRGLARSNLGFFKKAIKDYDKAIELSKNYKDAYYNRGFA 202

Query: 356 LRDAAIAQMKVCERYNIKKKVSPRSQNITKNEKLAIKQLRENNDIIIRPADKGGKTVVMD 415
             +A + + +  E YN   ++ P + +   N  ++ K   E  D  I+  +K  +    +
Sbjct: 203 KNNAGLHK-EAIEDYNKVIELDPNNIDAYNNRGVS-KNYLELFDEAIKDFNKILELEPNN 260

Query: 416 KADYTQKMTSILNSNDYEIIPGDPTKTIEESEKYGN-LENESGQKHAASDFTKAFADLDE 474
              Y+ +  S  +   Y+    D  K IE +  Y +   N    K     F +A  D D 
Sbjct: 261 YCAYSNRGNSKNDLGLYKEAIEDYNKAIEINPNYSDAYYNRGNSKKELGLFKEAIEDYDN 320

Query: 475 AEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQR 523
           A K +PN  ++Y  RG        YEEA+++ DK I L+ N+  A   R
Sbjct: 321 AIKWEPNNINTYLNRGNAKYDLELYEEAIKDYDKIIKLDTNYVDAYYNR 369


>gi|422304790|ref|ZP_16392129.1| Tetratricopeptide repeat protein [Microcystis aeruginosa PCC 9806]
 gi|389789976|emb|CCI14068.1| Tetratricopeptide repeat protein [Microcystis aeruginosa PCC 9806]
          Length = 1305

 Score = 85.9 bits (211), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 108/441 (24%), Positives = 186/441 (42%), Gaps = 49/441 (11%)

Query: 89   ESTSSNHTKALARLLRATVYIFTSQSTKAIEDLTQLVEDTSVDPKIKVNAHIKRAVVHLH 148
            ++ + N   + A + R  VY    +   A+ D  Q +E  +  P     A+I R   +  
Sbjct: 696  QALTLNPNNSRAYMARPGVYEERKEWDLALADYNQAIEIDANFP----GAYISRGSFYTD 751

Query: 149  AASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVAR 208
                +  A AD ++A  +DPN   SY  RG  Y    + E A+ +L K I +NP   V  
Sbjct: 752  R-KQWDLALADFNKAITIDPNDPSSYGMRGIFYIFQSEEELAIADLTKEIEINPYSVVPY 810

Query: 209  AQRHFVVHKMIVPGDRERVEQSLKEFRNFVDTHSNVVEACTLFAQVLVDQEDFDGAEEYF 268
              R F   K       ++ + +L ++R  ++   N         +   +++++D A   F
Sbjct: 811  LMRGFAYEKW------QKWDLALADYRKGIELDPNSGLGYEGRGRFYTERQEWDLALADF 864

Query: 269  NRSIRVDPENASLYVHRAMLMLQARGNVDEAIKLIEKAISIDKSCMFAYETLGTIEVQRG 328
            N+++ +DP + + Y  R  L    +   D A+    KAI +      +Y   G +  Q+ 
Sbjct: 865  NKALELDPNSGNGYQLRGTLYTNQK-KWDLALADFNKAIEL--GHFSSYGNRGNVYFQQQ 921

Query: 329  RLEEAVKCFNKALPLARDEAELSHIYSLRDAAIAQMKVCERYNIKKKVSPRSQNITKNEK 388
            + E A+  FNKA+ L+    E ++       A   +   +R      ++  SQ I  N  
Sbjct: 922  KWELALADFNKAIELS-PYPEFAY-------AFRAILYWDRKEWDLALTDLSQAIRINPY 973

Query: 389  LAIKQLRENNDIIIRPADKGGKTVVMDKADYTQKMTSILNSNDYEIIPGDPTKTIEESEK 448
            L +      N  I R  ++    + +  ADY + +   LNSND E+              
Sbjct: 974  LELAYRYRGN--IYRDQNQ----LDLALADYNKAIE--LNSNDAEL-------------- 1011

Query: 449  YGNLENESGQKHAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDK 508
            Y N   E  ++   SD   A AD   A ++DP    +Y QR  IY    +++ A+ ++ K
Sbjct: 1012 YYN-RGEIYRQQQKSDI--ALADYSRAIELDPKYWSAYLQRYIIYDQQKKWDLAIADITK 1068

Query: 509  TIALN--PNFHVARAQRHFVW 527
             I +   PN +VAR  ++  W
Sbjct: 1069 VIEIKQFPNAYVARGLKYLEW 1089



 Score = 72.0 bits (175), Expect = 8e-10,   Method: Compositional matrix adjust.
 Identities = 104/484 (21%), Positives = 186/484 (38%), Gaps = 76/484 (15%)

Query: 104  RATVYIFTSQSTKAIEDLTQLVEDTSVDPKIKVNAHIKRAVVHLHAASDFTKAFADLDEA 163
            +   Y   +QS KAI+   Q ++ +  +P      +       L     + +A A ++ A
Sbjct: 610  QGVFYKQMNQSEKAIDSFEQAIKISPQNPN-----YYNSLSSALQNVKRYDRALAAINRA 664

Query: 164  EKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQRHFVVHKMIVPGD 223
             ++ P  +  Y  RG IY    +++ AL + ++ + LNPN   A   R  V        +
Sbjct: 665  IEIAPR-SSWYSNRGNIYKDLKKWDLALADYNQALTLNPNNSRAYMARPGVYE------E 717

Query: 224  RERVEQSLKEFRNFVDTHSNVVEACTLFAQVLVDQEDFDGAEEYFNRSIRVDPENASLYV 283
            R+  + +L ++   ++  +N   A         D++ +D A   FN++I +DP + S Y 
Sbjct: 718  RKEWDLALADYNQAIEIDANFPGAYISRGSFYTDRKQWDLALADFNKAITIDPNDPSSYG 777

Query: 284  HRAMLML--------------------------QARG-------NVDEAIKLIEKAISID 310
             R +  +                            RG         D A+    K I +D
Sbjct: 778  MRGIFYIFQSEEELAIADLTKEIEINPYSVVPYLMRGFAYEKWQKWDLALADYRKGIELD 837

Query: 311  KSCMFAYETLGTIEVQRGRLEEAVKCFNKALPLARDEAELSHIYSLR----------DAA 360
             +    YE  G    +R   + A+  FNKAL L   +    + Y LR          D A
Sbjct: 838  PNSGLGYEGRGRFYTERQEWDLALADFNKALEL---DPNSGNGYQLRGTLYTNQKKWDLA 894

Query: 361  IAQMKVCERYNIKKKVSPRSQNITKNEKLAIKQLRENNDIIIRP----ADKGGKTVVMDK 416
            +A                R     + +K  +     N  I + P    A      +  D+
Sbjct: 895  LADFNKAIELGHFSSYGNRGNVYFQQQKWELALADFNKAIELSPYPEFAYAFRAILYWDR 954

Query: 417  ADYTQKMTSILNSNDYEIIPGDPTKTIEESEKY-GNLENESGQKHAASDFTKAFADLDEA 475
             ++   +T +  S    I P      +E + +Y GN+  +  Q         A AD ++A
Sbjct: 955  KEWDLALTDL--SQAIRINP-----YLELAYRYRGNIYRDQNQ------LDLALADYNKA 1001

Query: 476  EKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQRHFVWTSTLAELM 535
             +++ N A+ YY RG+IY    + + AL +  + I L+P +  A  QR+ ++       +
Sbjct: 1002 IELNSNDAELYYNRGEIYRQQQKSDIALADYSRAIELDPKYWSAYLQRYIIYDQQKKWDL 1061

Query: 536  AFSD 539
            A +D
Sbjct: 1062 AIAD 1065



 Score = 66.2 bits (160), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 101/449 (22%), Positives = 188/449 (41%), Gaps = 56/449 (12%)

Query: 103  LRATVYIFTSQSTKAIEDLTQLVEDTSVDPKIKVNAHIKRAVVHLHAASDFTKAFADLDE 162
            +R   YIF S+   AI DLT+ +E   ++P   V  ++ R   +      +  A AD  +
Sbjct: 778  MRGIFYIFQSEEELAIADLTKEIE---INP-YSVVPYLMRGFAY-EKWQKWDLALADYRK 832

Query: 163  AEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPN------------------- 203
              ++DPN    Y  RG+ Y    +++ AL + +K + L+PN                   
Sbjct: 833  GIELDPNSGLGYEGRGRFYTERQEWDLALADFNKALELDPNSGNGYQLRGTLYTNQKKWD 892

Query: 204  -----FHVARAQRHFVVH--KMIVPGDRERVEQSLKEFRNFVDTHSNVVEACTLFAQVLV 256
                 F+ A    HF  +  +  V   +++ E +L +F   ++       A    A +  
Sbjct: 893  LALADFNKAIELGHFSSYGNRGNVYFQQQKWELALADFNKAIELSPYPEFAYAFRAILYW 952

Query: 257  DQEDFDGAEEYFNRSIRVDPENASLYVHRAMLMLQARGNVDEAIKLIEKAISIDKSCMFA 316
            D++++D A    +++IR++P     Y +R  +  + +  +D A+    KAI ++ +    
Sbjct: 953  DRKEWDLALTDLSQAIRINPYLELAYRYRGNIY-RDQNQLDLALADYNKAIELNSNDAEL 1011

Query: 317  YETLGTIEVQRGRLEEAVKCFNKALPLARDEAELSH------IYSLR---DAAIAQM-KV 366
            Y   G I  Q+ + + A+  +++A+ L  D    S       IY  +   D AIA + KV
Sbjct: 1012 YYNRGEIYRQQQKSDIALADYSRAIEL--DPKYWSAYLQRYIIYDQQKKWDLAIADITKV 1069

Query: 367  CERYNIKKKVSPRSQNITKNEKLAIKQLRENNDIIIRPADKGGKTVVMDKAD-YTQKMTS 425
             E          R     + +K  +     N  I ++P          D A  Y  +   
Sbjct: 1070 IEIKQFPNAYVARGLKYLEWQKWDLALADFNKAIELKP----------DNASFYFTRGML 1119

Query: 426  ILNSNDYEIIPGDPTKTIEESEKYGNLENESGQKHAASD-FTKAFADLDEAEKVDPNVAD 484
               +  +++   D  + I+      +  +  G  +  +  +  A AD ++A  +DP + D
Sbjct: 1120 YYQTQKWDLALADFNQAIKLKPDNASFYSTRGTLYYKTQKWDLALADFNQAIALDPKLKD 1179

Query: 485  SYYQRGQIYCLFGQYEEALRNLDKTIALN 513
            SY  RG+IY    +Y EAL++  K + L+
Sbjct: 1180 SYNFRGEIYKRQKRYPEALQDYQKVLELD 1208



 Score = 62.4 bits (150), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 53/239 (22%), Positives = 111/239 (46%), Gaps = 35/239 (14%)

Query: 100  ARLLRATVYIFTSQSTKAIEDLTQLVEDTSVDPKIKVNAHIKRAVVHLHAASDFTKAFAD 159
            A L R  +Y    +   AI D+T+++E          NA++ R + +L     +  A AD
Sbjct: 1045 AYLQRYIIYDQQKKWDLAIADITKVIEIKQFP-----NAYVARGLKYLEW-QKWDLALAD 1098

Query: 160  LDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPN---FHVARAQRHFVVH 216
             ++A ++ P+ A  Y+ RG +Y    +++ AL + ++ I L P+   F+  R   ++   
Sbjct: 1099 FNKAIELKPDNASFYFTRGMLYYQTQKWDLALADFNQAIKLKPDNASFYSTRGTLYYKTQ 1158

Query: 217  KM-IVPGD------------------------RERVEQSLKEFRNFVDTHSNVVEACTLF 251
            K  +   D                        ++R  ++L++++  ++     + A T  
Sbjct: 1159 KWDLALADFNQAIALDPKLKDSYNFRGEIYKRQKRYPEALQDYQKVLELDEKDLIAITNI 1218

Query: 252  AQVLVDQEDFDGAEEYFNRSIRVDPENASLYVHRAMLMLQARGNVDEAIKLIEKAISID 310
              +  +Q D + A   F +S+ ++P++A   +  A+ + + +GN ++AIKL + A+ ID
Sbjct: 1219 GLIYYEQGDLNLASSQFQKSLEINPQSAENQLALAVTLYR-QGNTEKAIKLAKSALKID 1276



 Score = 58.5 bits (140), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 75/338 (22%), Positives = 135/338 (39%), Gaps = 52/338 (15%)

Query: 50   ELTNGDTNESHELDL---LSKAKRAFEHEDYLTAIRHCTEEIESTSSNHTKALARLLRAT 106
            EL   D N++ EL      + A RA  + D        T+  ++   N    LA   R  
Sbjct: 924  ELALADFNKAIELSPYPEFAYAFRAILYWDRKEWDLALTDLSQAIRINPYLELAYRYRGN 983

Query: 107  VYIFTSQSTKAIEDLTQLVEDTSVDPKIKVNAHIKRAVVHLHAASDFTKAFADLDEAEKV 166
            +Y   +Q   A+ D  + +E  S D ++  N   +  +      SD   A AD   A ++
Sbjct: 984  IYRDQNQLDLALADYNKAIELNSNDAELYYN---RGEIYRQQQKSDI--ALADYSRAIEL 1038

Query: 167  DPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALN--PNFHVARAQRHFVVHKMIVPGDR 224
            DP    +Y QR  IY    +++ A+ ++ K I +   PN +VAR  ++          + 
Sbjct: 1039 DPKYWSAYLQRYIIYDQQKKWDLAIADITKVIEIKQFPNAYVARGLKYL---------EW 1089

Query: 225  ERVEQSLKEFRNFVDTHSNVVEACTLFAQVLVDQEDFDGAEEYFNRSIRVDPENASLYVH 284
            ++ + +L +F   ++   +          +    + +D A   FN++I++ P+NAS Y  
Sbjct: 1090 QKWDLALADFNKAIELKPDNASFYFTRGMLYYQTQKWDLALADFNQAIKLKPDNASFYST 1149

Query: 285  RAMLMLQA--------------------------RGNV-------DEAIKLIEKAISIDK 311
            R  L  +                           RG +        EA++  +K + +D+
Sbjct: 1150 RGTLYYKTQKWDLALADFNQAIALDPKLKDSYNFRGEIYKRQKRYPEALQDYQKVLELDE 1209

Query: 312  SCMFAYETLGTIEVQRGRLEEAVKCFNKALPLARDEAE 349
              + A   +G I  ++G L  A   F K+L +    AE
Sbjct: 1210 KDLIAITNIGLIYYEQGDLNLASSQFQKSLEINPQSAE 1247



 Score = 45.4 bits (106), Expect = 0.074,   Method: Compositional matrix adjust.
 Identities = 67/287 (23%), Positives = 121/287 (42%), Gaps = 56/287 (19%)

Query: 268 FNRSIRV-DPENASLYVHRAMLMLQARGNVDEAIKLIEKAISI----DKSCMFAYETL-- 320
           F+R+I++ DPE   L  +    +   +    E IK +++A++     +K   F  E L  
Sbjct: 550 FDRAIQLNDPEYTYLAWYGKARVYGRKYKAREGIKALDQALATLPAREKGSEFHAEILNY 609

Query: 321 -GTIEVQRGRLEEAVKCFNKALPLARDEAELSHIYSLRDAAIAQMKVCER----YNIKKK 375
            G    Q  + E+A+  F +A+ ++    +  + Y+   +A+  +K  +R     N   +
Sbjct: 610 QGVFYKQMNQSEKAIDSFEQAIKIS---PQNPNYYNSLSSALQNVKRYDRALAAINRAIE 666

Query: 376 VSPRSQNITKNEKLAIKQLRENNDIIIRPADKGGKTVVMDKADYTQKMTSILNSND---Y 432
           ++PRS +   N     K L++ +               +  ADY Q +T  LN N+   Y
Sbjct: 667 IAPRS-SWYSNRGNIYKDLKKWD---------------LALADYNQALT--LNPNNSRAY 708

Query: 433 EIIPGDPTKTIEESEKYGNLENESGQKHAASDFTKAFADLDEAEKVDPNVADSYYQRGQI 492
              PG     + E  K  +L               A AD ++A ++D N   +Y  RG  
Sbjct: 709 MARPG-----VYEERKEWDL---------------ALADYNQAIEIDANFPGAYISRGSF 748

Query: 493 YCLFGQYEEALRNLDKTIALNPNFHVARAQRHFVWTSTLAELMAFSD 539
           Y    Q++ AL + +K I ++PN   +   R   +     E +A +D
Sbjct: 749 YTDRKQWDLALADFNKAITIDPNDPSSYGMRGIFYIFQSEEELAIAD 795


>gi|384208242|ref|YP_005593962.1| TPR domain-containing protein [Brachyspira intermedia PWS/A]
 gi|343385892|gb|AEM21382.1| putative TPR domain-containing protein [Brachyspira intermedia
           PWS/A]
          Length = 817

 Score = 85.9 bits (211), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 109/458 (23%), Positives = 198/458 (43%), Gaps = 67/458 (14%)

Query: 119 EDLTQLVEDTSVDPKIKVNAHIKRAVVHLHAASDFTKAFADLDEAEKVDPNVADSYYQ-- 176
           E L  L +   ++P   ++A+   A   LH      +A   L++A ++ PN AD+Y++  
Sbjct: 297 ESLEYLKKALEINPNF-IDAYYDIAFA-LHKLDLNNEALEYLEKALQIYPNSADTYFKMF 354

Query: 177 ---------RGQIYCL-----------------------FGQYEEALRNLDKTIALNPNF 204
                     G + CL                          Y+EAL  L+K + ++ N 
Sbjct: 355 LVKRALRDYEGALSCLNKILEIDNTDVVIYNEIALIKVELELYDEALSYLNKALDIDTN- 413

Query: 205 HVARAQRHFVVHKMIVPGDRERVEQSLKEFRNFVDTHSNVVEACTLFAQVLVDQEDFDGA 264
               A+ +  +   +V   ++  E+++K F   ++ ++++  A         +  D++ +
Sbjct: 414 ---NAEIYNSIG--LVYYYKKDYEEAIKNFNKAIELNTSMASAYYNIGLAYYEMHDYENS 468

Query: 265 EEYFNRSIRVDPENASLYVHRAMLMLQARGNVDEAIKLIEKAISIDKSCMFAYETLGTIE 324
            +Y+N+++ ++P+ AS Y++   L+    GN  EAI   +KA+ I+     AY  +   E
Sbjct: 469 IQYYNKALEINPQYASAYINLG-LIKHNLGNYKEAIDYYKKALEINPDYSLAYYNIALAE 527

Query: 325 VQRGRLEEAVKCFNKALPLARDEAE----LSHIYSLRDAAIAQMKVCERYNIKKKVSPRS 380
           +     + +++ FNKAL L  DEAE    +  IYS +  AI   K  E YN   +++P  
Sbjct: 528 MSLEDYKNSLEDFNKALELGYDEAEIYINIGLIYSRQ--AIYD-KAIEYYNKVLEINPNK 584

Query: 381 QNITKNEKLAIKQLR------ENNDIIIRPADKGGKTVVMDKADYTQKMTSILNSNDYEI 434
            N   N    +  +       E  D +IR    G   V  ++  YT+   S      YE 
Sbjct: 585 VNAYYNIAFCLSNMDKYEETLEIYDKVIRMY-PGNFDVYYERG-YTKYRAS-----KYEE 637

Query: 435 IPGDPTKTIEESEKYGNLENESG-QKHAASDFTKAFADLDEAEKVDPNVADSYYQRGQIY 493
              D    I  + K+ N     G  K    ++ +A  D D+A + + N +D Y +R   Y
Sbjct: 638 AIRDFDIIINVNSKHYNAYYYRGCSKKYLKNYDEAIKDFDKAIEYNANNSDFYSERASCY 697

Query: 494 CLFGQYEEALRNLDKTIALNPN---FHVARAQRHFVWT 528
               +Y E++ N DK I L  +    ++ RA+  F+ +
Sbjct: 698 DYLNKYRESIENYDKAIELKDDDWFLYILRAKEKFLLS 735



 Score = 85.1 bits (209), Expect = 8e-14,   Method: Compositional matrix adjust.
 Identities = 120/485 (24%), Positives = 211/485 (43%), Gaps = 80/485 (16%)

Query: 63  DLLSKAKRAFEHEDYLTAIRHCTEEI----ESTSSNHTKALARL------------LRA- 105
           +LL KAK AFE+ +Y  +I +  + I    +S    H K L++L             RA 
Sbjct: 7   ELLDKAKEAFENREYEKSIEYIDKVIFYNGDSYDLYHNKGLSKLNLGLYEEAIKDFERAI 66

Query: 106 -------TVY-------IFTSQSTKAIEDLTQLVEDTSVDPKIKVNAHIKRAVVHLHAAS 151
                  TVY       ++ S   +AIED  ++++  + D   +VN      + +L+   
Sbjct: 67  ELGDDGETVYYDRGLAKLYLSFYGEAIEDFNRVLQINNNDIDSRVNV----GLCYLY-MK 121

Query: 152 DFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQR 211
           ++ +A    DE     P+  +SY  RG       Q+EEA+ + +K I L+ N   + A  
Sbjct: 122 NYKEAINIYDEVIADFPDNINSYNNRGLCKFYLSQFEEAINDFNKVIELDKNSTASMAYN 181

Query: 212 HFVVHKMIVPGDRERVEQSLKEFRNFVDTHSNVVEACTLFAQVLVDQEDFDGAEEYFNRS 271
           +  + K  +    + + ++LK +   ++ + N++ A    A +    E  D A  Y N++
Sbjct: 182 YIGLCKYHL----DEITEALKYYEKAIEINPNLINAYHNIALIKHSGEFDDEALSYLNKA 237

Query: 272 IRVDPENASLYVHRAMLMLQARGNVDEAIKLIEKAISIDKSCMFAYETLGTIEVQRGRLE 331
           + +DP N   Y+    + L      DEA + + K + +    ++ Y+ +G I++  G +E
Sbjct: 238 LEIDPGNLETYLKIYSIKLDLEL-YDEANEYLNKILEMYPDDLYVYDRIGNIKIDAGYME 296

Query: 332 EAVKCFNKALPLARDEAELSHIYSLRDAAIAQMKVCERYNIKKKVSPRSQNITKNEKLAI 391
           E+++   KAL     E   + I +  D A A  K+                   NE  A+
Sbjct: 297 ESLEYLKKAL-----EINPNFIDAYYDIAFALHKLD----------------LNNE--AL 333

Query: 392 KQLRENNDIIIRPADKGGKTVVMDKA--DYTQKMTSILNSNDYEIIPGDPTKTIEESEKY 449
           + L +   I    AD   K  ++ +A  DY   + S LN    +I+  D T  +      
Sbjct: 334 EYLEKALQIYPNSADTYFKMFLVKRALRDYEGAL-SCLN----KILEIDNTDVV------ 382

Query: 450 GNLENESGQ-KHAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDK 508
             + NE    K     + +A + L++A  +D N A+ Y   G +Y     YEEA++N +K
Sbjct: 383 --IYNEIALIKVELELYDEALSYLNKALDIDTNNAEIYNSIGLVYYYKKDYEEAIKNFNK 440

Query: 509 TIALN 513
            I LN
Sbjct: 441 AIELN 445


>gi|434402232|ref|YP_007145117.1| tetratricopeptide repeat protein [Cylindrospermum stagnale PCC
           7417]
 gi|428256487|gb|AFZ22437.1| tetratricopeptide repeat protein [Cylindrospermum stagnale PCC
           7417]
          Length = 537

 Score = 85.9 bits (211), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 95/429 (22%), Positives = 181/429 (42%), Gaps = 58/429 (13%)

Query: 104 RATVYIFTSQSTKAIEDLTQLVEDTSVDPKIKVNAHIKRAVVHLHAASDFTKAFADLDEA 163
           R  ++    + + AI D  Q +    ++P      H +    +  A  D+  A AD + +
Sbjct: 117 RGNIFYILGKYSDAIADYDQAIR---LNPNFAPAYHNRGNTRY--ALEDYPGAIADYNRS 171

Query: 164 EKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQRHFVVHKMIVPGD 223
            +++PN  ++YY RG  +    +YE+A+ + +  + LNP+   A  +R  V   +   GD
Sbjct: 172 LEINPNFGEAYYSRGLFFSHLKKYEKAIADFNAALKLNPDDVQAYYERGLVYSAL---GD 228

Query: 224 RERVEQSLKEFRNFVDTHSNVVEACTLFAQVLVDQEDFDGAEEYFNRSIRVDPENASLYV 283
            ++   ++ ++   +  +  +       A       D+ GA    NR ++++P  A  Y 
Sbjct: 229 DQK---AIADYNQALQENPTLALVYGFRANARHRLGDYQGAIADSNRLLQLNPNLAEGYC 285

Query: 284 HRAMLMLQARGNVDEAIKLIEKAISIDKSCMFAYETLGTIEVQRGRLEEAVKCFNKALPL 343
            RA    +A G+   AI+   +A+ I+ +  FAY         RG   EA+K F  A+  
Sbjct: 286 DRAAAR-RALGDYQGAIQDYNRALQINVNLAFAY-------YGRGIAREALKDFQGAIE- 336

Query: 344 ARDEAELSHIYSLRDAAIAQMKVCERYNIKKKVSPRSQNITKNEKLAIKQLRENNDIIIR 403
                   +  ++  A       C R N ++ +      I    +     L+ N D+I  
Sbjct: 337 -------DNTLAIEIAPEFAPAYCNRGNARRLLGDEQGAIADYSQ----ALQINPDLIEA 385

Query: 404 PADKGGKTVVMDK-----ADYTQKMTSILNSNDYEIIPGDPTKTIEESEKYGNLENESGQ 458
             ++G     +++     AD+TQ +         +I P       + +  Y  LE     
Sbjct: 386 YYNRGSTRYALEEYEGAIADFTQAL---------QINPDSAPFYSDRANAYYALE----- 431

Query: 459 KHAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNF-- 516
                D+  A AD ++A  +D + A+ ++ RG+   L G  E AL +L++ + L P++  
Sbjct: 432 -----DYPAAIADYNQAIVLDQSCAEDWFNRGRSRSLLGNLEGALTDLNQALQLQPDWAT 486

Query: 517 -HVARAQRH 524
            ++ RA  H
Sbjct: 487 AYILRADVH 495



 Score = 48.1 bits (113), Expect = 0.012,   Method: Compositional matrix adjust.
 Identities = 23/86 (26%), Positives = 47/86 (54%)

Query: 454 NESGQKHAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALN 513
           N    ++A  D+  A AD + + +++PN  ++YY RG  +    +YE+A+ + +  + LN
Sbjct: 150 NRGNTRYALEDYPGAIADYNRSLEINPNFGEAYYSRGLFFSHLKKYEKAIADFNAALKLN 209

Query: 514 PNFHVARAQRHFVWTSTLAELMAFSD 539
           P+   A  +R  V+++   +  A +D
Sbjct: 210 PDDVQAYYERGLVYSALGDDQKAIAD 235



 Score = 47.4 bits (111), Expect = 0.022,   Method: Compositional matrix adjust.
 Identities = 23/61 (37%), Positives = 33/61 (54%)

Query: 463 SDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQ 522
            D   A AD D + +  PN   +Y  RG I+ + G+Y +A+ + D+ I LNPNF  A   
Sbjct: 91  GDHQGAIADFDSSLEWYPNFVAAYSNRGNIFYILGKYSDAIADYDQAIRLNPNFAPAYHN 150

Query: 523 R 523
           R
Sbjct: 151 R 151



 Score = 43.1 bits (100), Expect = 0.36,   Method: Compositional matrix adjust.
 Identities = 81/393 (20%), Positives = 144/393 (36%), Gaps = 108/393 (27%)

Query: 151 SDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQ 210
            D+  A A  +EA +++P +A ++Y RGQ Y    +Y EA+ N                 
Sbjct: 17  GDYLGAIALYNEALRLNPCLALAFYHRGQAYFALSEYSEAIANY---------------- 60

Query: 211 RHFVVHKMIVPGDRERVEQSLKEFRNFVDTHSNVVEACTLFAQVLVDQEDFDGAEEYFNR 270
           R  + HK                                     L    +FD A+ Y +R
Sbjct: 61  RQAIEHK-------------------------------------LTQNINFDIAKAYHSR 83

Query: 271 SI-RVDPENASLYVHRAMLMLQARGNVDEAIKLIEKAISIDKSCMFAYETLGTIEVQRGR 329
            + R D                 RG+   AI   + ++    + + AY   G I    G+
Sbjct: 84  GLGRFD-----------------RGDHQGAIADFDSSLEWYPNFVAAYSNRGNIFYILGK 126

Query: 330 LEEAVKCFNKALPLARDEAELSH-----IYSLRD--AAIAQMKVCERYNIKKKVSPRSQN 382
             +A+  +++A+ L  + A   H      Y+L D   AIA       YN   +++P    
Sbjct: 127 YSDAIADYDQAIRLNPNFAPAYHNRGNTRYALEDYPGAIAD------YNRSLEINPNFGE 180

Query: 383 ITKNEKLAIKQLRE--------NNDIIIRPADKGGKTVVMDKADYTQKMTSILNSNDYEI 434
              +  L    L++        N  + + P D         +A Y + +      +D + 
Sbjct: 181 AYYSRGLFFSHLKKYEKAIADFNAALKLNPDDV--------QAYYERGLVYSALGDDQKA 232

Query: 435 IPGDPTKTIEESEK----YGNLENESGQKHAASDFTKAFADLDEAEKVDPNVADSYYQRG 490
           I  D  + ++E+      YG   N    +H   D+  A AD +   +++PN+A+ Y  R 
Sbjct: 233 I-ADYNQALQENPTLALVYGFRANA---RHRLGDYQGAIADSNRLLQLNPNLAEGYCDRA 288

Query: 491 QIYCLFGQYEEALRNLDKTIALNPNFHVARAQR 523
                 G Y+ A+++ ++ + +N N   A   R
Sbjct: 289 AARRALGDYQGAIQDYNRALQINVNLAFAYYGR 321



 Score = 40.8 bits (94), Expect = 1.7,   Method: Compositional matrix adjust.
 Identities = 25/75 (33%), Positives = 40/75 (53%), Gaps = 4/75 (5%)

Query: 451 NLENESGQKHAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTI 510
           +L N+   K    D+  A A  +EA +++P +A ++Y RGQ Y    +Y EA+ N  + I
Sbjct: 5   DLINQGLNKDLQGDYLGAIALYNEALRLNPCLALAFYHRGQAYFALSEYSEAIANYRQAI 64

Query: 511 ----ALNPNFHVARA 521
                 N NF +A+A
Sbjct: 65  EHKLTQNINFDIAKA 79


>gi|159906168|ref|YP_001549830.1| hypothetical protein MmarC6_1787 [Methanococcus maripaludis C6]
 gi|159887661|gb|ABX02598.1| TPR repeat-containing protein [Methanococcus maripaludis C6]
          Length = 543

 Score = 85.5 bits (210), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 101/505 (20%), Positives = 213/505 (42%), Gaps = 62/505 (12%)

Query: 63  DLLSKAKRAFEHEDYLTAIRHCTEEIESTSSNHTKALARLLRATVYIFTSQSTKAIEDLT 122
           D   +    +++E+Y  +I      +E    + T   A   +  +     +S +A+    
Sbjct: 35  DWFDEGLNYYDNENYEKSIECFNNALELDPYDKT---AWFNKGYILYGIYRSNEALVCFD 91

Query: 123 QLVEDTSVDPKIKVNAHIKRAVVHLHAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYC 182
           +++E   +DP+   +A + +   + +   ++ K    LD+A ++DP   D+YY  G  Y 
Sbjct: 92  KVLE---LDPE-AFDAWLYKGYTY-YDLDNYQKTIECLDKALELDPENLDAYYCEGDSYY 146

Query: 183 LFGQYEEALRNLDKTIALNPNFHVARAQRHFVVHKMIVPGDRERVEQSLKEFRNFVDTHS 242
              +YEE+L   ++ + LNP +      +   +HK+       R E+++  +   +    
Sbjct: 147 FLERYEESLECYNRALELNPTYTSLLVDKGTSLHKL------GRYEEAIICYDKALKIDP 200

Query: 243 NVVEACTLFAQVLVDQEDFDGAEEYFNRSIRVDPENASLYVHRAMLMLQARGNVDEAIKL 302
           N   A +     L D   ++ + E ++++++ +   + ++ ++  L L   G  +EAI  
Sbjct: 201 NYAYALSNKGLSLYDLGRYEESIECYDKALKSNSGYSYVWYNKG-LALYDMGRYEEAIGC 259

Query: 303 IEKAISIDKSCMFAYETLGTIEVQRGRLEEAVKCFNKALPLARDEAELSHIYSL------ 356
             +AI +D + + ++   G      GR EEA+ C+++AL L  + ++  +   L      
Sbjct: 260 YNRAIELDSNDIDSWNNKGLALYDLGRYEEAIVCYDRALELDSNYSDSQYNKGLALQYLE 319

Query: 357 -RDAAIAQMKVCERYNIKKKVSPRSQNITKNEKLAIKQLRENNDII--------IRPAD- 406
             D AI    VC  Y+   +++P   +   N+ +++ ++    + I        + P D 
Sbjct: 320 RYDEAI----VC--YDKTLELNPEDTDSWCNKGISLHEVGRYEEAIECYDKSLELNPEDV 373

Query: 407 -----KGGKTVVMDK-ADYTQKMTSILNSND------------------YEIIPGDPTKT 442
                KG     + +  +  Q   + LN N                   YE   G   + 
Sbjct: 374 DILYNKGNSLYDLGRYEEAVQFYNNALNINSSCSDAWHNKGLALHDLGKYEEAIGCYNRA 433

Query: 443 IEESEKYGNLENESGQK-HAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEE 501
           IE      +  N  G   +    + +A    D++ +++PN +D++Y +G   C  G+YEE
Sbjct: 434 IELGPNNSDSWNNKGNSLYDLGRYEEAIECYDKSLELNPNYSDTWYNKGLSLCKLGRYEE 493

Query: 502 ALRNLDKTIALNPNFHVARAQRHFV 526
           A+    + + LNP+   A   + + 
Sbjct: 494 AIEYYGRALELNPSDEEAELGKQYA 518



 Score = 63.9 bits (154), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 54/256 (21%), Positives = 116/256 (45%), Gaps = 8/256 (3%)

Query: 147 LHAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHV 206
           L+    + +A    D A ++D N +DS Y +G       +Y+EA+   DKT+ LNP    
Sbjct: 281 LYDLGRYEEAIVCYDRALELDSNYSDSQYNKGLALQYLERYDEAIVCYDKTLELNPEDTD 340

Query: 207 ARAQRHFVVHKMIVPGDRERVEQSLKEFRNFVDTHSNVVEACTLFAQVLVDQEDFDGAEE 266
           +   +   +H++       R E++++ +   ++ +   V+        L D   ++ A +
Sbjct: 341 SWCNKGISLHEV------GRYEEAIECYDKSLELNPEDVDILYNKGNSLYDLGRYEEAVQ 394

Query: 267 YFNRSIRVDPENASLYVHRAMLMLQARGNVDEAIKLIEKAISIDKSCMFAYETLGTIEVQ 326
           ++N ++ ++   +  + H   L L   G  +EAI    +AI +  +   ++   G     
Sbjct: 395 FYNNALNINSSCSDAW-HNKGLALHDLGKYEEAIGCYNRAIELGPNNSDSWNNKGNSLYD 453

Query: 327 RGRLEEAVKCFNKALPLARDEAELSHIYSLRDAAIAQM-KVCERYNIKKKVSPRSQNITK 385
            GR EEA++C++K+L L  + ++  +   L    + +  +  E Y    +++P  +    
Sbjct: 454 LGRYEEAIECYDKSLELNPNYSDTWYNKGLSLCKLGRYEEAIEYYGRALELNPSDEEAEL 513

Query: 386 NEKLAIKQLRENNDII 401
            ++ A  QL    +I+
Sbjct: 514 GKQYAENQLNSGLNIL 529



 Score = 58.5 bits (140), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 82/386 (21%), Positives = 154/386 (39%), Gaps = 74/386 (19%)

Query: 163 AEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPN------------FHVARAQ 210
           A  +D   ++ ++  G  Y     YE+++   +  + L+P             + + R+ 
Sbjct: 25  ANTIDGKTSEDWFDEGLNYYDNENYEKSIECFNNALELDPYDKTAWFNKGYILYGIYRSN 84

Query: 211 RHFVVHKMIVPGDRERVEQSLKEFRNF--VDTHSNVVEACTLFAQVLVDQEDFD-----G 263
              V    ++  D E  +  L +   +  +D +   +E   L   + +D E+ D     G
Sbjct: 85  EALVCFDKVLELDPEAFDAWLYKGYTYYDLDNYQKTIEC--LDKALELDPENLDAYYCEG 142

Query: 264 AEEYF-----------NRSIRVDPENASLYVHRAMLMLQARGNVDEAIKLIEKAISIDKS 312
              YF           NR++ ++P   SL V +    L   G  +EAI   +KA+ ID +
Sbjct: 143 DSYYFLERYEESLECYNRALELNPTYTSLLVDKGT-SLHKLGRYEEAIICYDKALKIDPN 201

Query: 313 CMFAYETLGTIEVQRGRLEEAVKCFNKALPLARDEAELSHIYSLRDAAIAQMKVCER--- 369
             +A    G      GR EE+++C++KAL   +  +  S+++  +  A+  M   E    
Sbjct: 202 YAYALSNKGLSLYDLGRYEESIECYDKAL---KSNSGYSYVWYNKGLALYDMGRYEEAIG 258

Query: 370 -YNIKKKVSPRSQNITKNEKLAIKQLRENNDIIIRPADKGGKTVVMDKADYTQKMTSILN 428
            YN   ++     +   N+ LA+  L    + I          V  D+A    ++ S  N
Sbjct: 259 CYNRAIELDSNDIDSWNNKGLALYDLGRYEEAI----------VCYDRA---LELDS--N 303

Query: 429 SNDYEIIPGDPTKTIEESEKYGNLENESGQKHAASDFTKAFADLDEAEKVDPNVADSYYQ 488
            +D +   G   + +E                    + +A    D+  +++P   DS+  
Sbjct: 304 YSDSQYNKGLALQYLER-------------------YDEAIVCYDKTLELNPEDTDSWCN 344

Query: 489 RGQIYCLFGQYEEALRNLDKTIALNP 514
           +G      G+YEEA+   DK++ LNP
Sbjct: 345 KGISLHEVGRYEEAIECYDKSLELNP 370


>gi|320168768|gb|EFW45667.1| predicted protein [Capsaspora owczarzaki ATCC 30864]
          Length = 756

 Score = 85.5 bits (210), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 98/422 (23%), Positives = 182/422 (43%), Gaps = 92/422 (21%)

Query: 6   GAQHAKEEISKRSFFKPSKQFIKTYLKSFPNDPILQPDGLSNGVELTNGDTNESHELDLL 65
           G+  AKE  + +    P  + IK YL +F      QPD                      
Sbjct: 366 GSSKAKESAAAKHGNFPPARIIKMYLGTFQ-----QPD--------------------RE 400

Query: 66  SKAKRAFEHEDYLTAIRHCTEEIESTSSNHTKALARLLRATVYIFTSQSTKAIEDLTQLV 125
            K  +  E +D  +     T EIE+  S   K+    LR  + +  +Q   A+ D T  V
Sbjct: 401 DKYAKELEGKDEAS----LTAEIEAAESGAAKSKIYTLRGELRLRAAQYPGALADFTSAV 456

Query: 126 EDTSVDPKIKVNAHIKRAVVHLHAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFG 185
            +   +    V A I++  + LH ++D   A   LD+A  +  N  D+  ++G +  L G
Sbjct: 457 TEDGTN----VWALIQQGTL-LHLSNDLKGAIVVLDKALSLSANNVDALVRKGNVQFLLG 511

Query: 186 QYEEALRNLD--------KTIALNPNFHVARAQRH----------FVVHKMIVPGDRERV 227
           +++ A++ L         +T+AL   +H A+A +H          +     + P D +  
Sbjct: 512 EHQAAIKTLGEAILADTTRTVAL---YHCAQAHQHTGNIESAMECYEALLKLNPKDYDAW 568

Query: 228 EQ---SLKEFRNFVDTHSNVVEACTLFAQVL------------VDQ-------------- 258
            Q   SL +F + +   +   +A  + AQ L            +DQ              
Sbjct: 569 NQRGLSLYQF-SLLLAQTGQQQAEAIMAQCLNGAIESFHSAIAIDQTKPEAHNSLGYVLQ 627

Query: 259 --EDFDGAEEYFNRSIRVDPENASLYVHRAMLMLQARGNVDEAIKLIEKAISIDKSCMFA 316
                + A + F+ +I +DP +   Y ++ +L++Q+ G+  +A  L  KAI +D SC+ A
Sbjct: 628 GINQVEPALQEFDAAISLDPTSPIGYTNKGLLIMQSSGDAVKAKALHLKAIEVDPSCIEA 687

Query: 317 YETLGTIEVQRGRLEEAVKCFNKALPLARDEAELSHIYSLRDAAIAQMKVCERYNIKKKV 376
              L  +  Q   ++EA++ +++A+ L   E +L+ I++ R+AA+++     + NI + +
Sbjct: 688 RCNLAMLLFQLQDIDEAIRHYDEAIELTFVEQDLATIFAFREAALSR-----KRNIARGI 742

Query: 377 SP 378
           +P
Sbjct: 743 AP 744



 Score = 39.3 bits (90), Expect = 5.3,   Method: Compositional matrix adjust.
 Identities = 63/293 (21%), Positives = 117/293 (39%), Gaps = 28/293 (9%)

Query: 255 LVDQEDFDGAEEYFNRSIRVDP----ENASLYVHRAMLMLQARGNVDEAIKLIEKAISID 310
           L +  ++  A   + ++I + P    E A  Y +RA    +   +    I+    A++ID
Sbjct: 256 LFNASNYTEAIAKYTQAIELCPATEKERAKFYCNRAACHAKQSAHA-LVIEDCNAALAID 314

Query: 311 KSCMFAYETLGTIEVQRGRLEEAVKCFNKALPLARDEAELSHIYSLRDAAIAQMKVCERY 370
            +   A +  G      G+L EA+   + A+ L  +EA L    S    +I   K  E  
Sbjct: 315 PAYGKALQRRGLAHESLGQLTEAIDDLSVAVHLMEEEASLQTALSRILESIGSSKAKESA 374

Query: 371 NIKKKVSPRS----------QNITKNEKLAIKQLRENNDIIIRPADKGGKTVVMDKADYT 420
             K    P +          Q   + +K A K+L   ++  +    +  ++       YT
Sbjct: 375 AAKHGNFPPARIIKMYLGTFQQPDREDKYA-KELEGKDEASLTAEIEAAESGAAKSKIYT 433

Query: 421 QKMTSILNSNDYEIIPGDPTKTI-EESEKYGNLENESGQKHAASDFTKAFADLDEAEKVD 479
            +    L +  Y     D T  + E+      L  +    H ++D   A   LD+A  + 
Sbjct: 434 LRGELRLRAAQYPGALADFTSAVTEDGTNVWALIQQGTLLHLSNDLKGAIVVLDKALSLS 493

Query: 480 PNVADSYYQRGQIYCLFGQYEEALRNLD--------KTIALNPNFHVARAQRH 524
            N  D+  ++G +  L G+++ A++ L         +T+AL   +H A+A +H
Sbjct: 494 ANNVDALVRKGNVQFLLGEHQAAIKTLGEAILADTTRTVAL---YHCAQAHQH 543


>gi|186684862|ref|YP_001868058.1| hypothetical protein Npun_F4764 [Nostoc punctiforme PCC 73102]
 gi|186467314|gb|ACC83115.1| Tetratricopeptide TPR_2 repeat protein [Nostoc punctiforme PCC
           73102]
          Length = 630

 Score = 85.5 bits (210), Expect = 7e-14,   Method: Compositional matrix adjust.
 Identities = 116/512 (22%), Positives = 211/512 (41%), Gaps = 78/512 (15%)

Query: 55  DTNESHELD------LLSKAKRAFEHEDYLTAIRHCTEEIESTSS-----NHTKALARLL 103
           D N++ E+D        S+    F  E Y  AI    + IE+++      N   A A   
Sbjct: 118 DYNQALEIDPNLAQFYHSRGNAYFALEKYDKAIADYIQTIETSTQLADNINIDIANAYHN 177

Query: 104 RATVYIFTSQSTKAIEDLTQLVEDTSVDPKIKVNAHIKRAVVHLHAASDFTKAFADLDEA 163
           R  V         AI D  Q ++     P     A+  R  +H H   +F +A AD D A
Sbjct: 178 RGVVCFEKGDRQGAIADFQQALQ---WYPNFAA-AYSNRGNIH-HILGNFKEAIADHDRA 232

Query: 164 EKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQRHFVVHKMIVPGD 223
            ++DP +A++Y+ RG  +     Y+ A+ + ++ + +NP F  A   R  V+  +     
Sbjct: 233 LQLDPKLAEAYHNRGNAHYSLENYQSAIADYNRALEINPRFAGAYYNRGLVLAHL----- 287

Query: 224 RERVEQSLKEFRNFVDTHSNVVEACTLFAQVLVDQEDFDGAEEYFNRSIRVDPENASLYV 283
            +   +++++F   +  + + V+A      V    ED++GA   ++R+++ +P  A +Y 
Sbjct: 288 -KEYHRAIEDFNQALKFNPDDVQAYCERGLVRSTLEDYEGAIADYDRALQENPTLALVYG 346

Query: 284 HRAMLMLQARGNVDEAIKLIEKAISIDKSCMFAYETLGTIEVQRGRLEEAVKCFNKALPL 343
            RA   L+  G+   AI+   + + ++ S    Y          G  + A+K +++AL +
Sbjct: 347 FRAN-ALRRLGDYQGAIEDSNRLLQLNPSLAEGYCDRAAARRSLGDHKGAIKDYDRALQI 405

Query: 344 ARDEAELSHIYSLRDAAIAQMK----------------------VCERYNIKKKVSPRSQ 381
                +L+  Y  R  A   +K                       C R N ++ +     
Sbjct: 406 ---NDQLAAAYYGRGIAREALKDLQGAIDDNTQAIELVPEFSQAYCNRGNTRRLLGDEQG 462

Query: 382 NITK-NEKLAIKQLRENNDIIIRPADKGGKTVVMDK-----ADYTQKMTSILNSNDYEII 435
            I   N+ L I     N D+I    ++G     ++      ADYTQ +         +I 
Sbjct: 463 AIADYNQALKI-----NPDLIEAYYNRGSTHYALEAYESAIADYTQAL---------QIN 508

Query: 436 PGDPTKTIEESEKYGNLENESGQKHAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCL 495
           P       + +  Y +  N    ++A  D+  A  D   A  +D + A+ +Y RG+   L
Sbjct: 509 P-------QSAAFYSDRANA---RYALEDYQGAIEDYSRAIAIDSSFAEDWYNRGRSRSL 558

Query: 496 FGQYEEALRNLDKTIALNPNFHVARAQRHFVW 527
            G  + AL +L++ + L P++  A   R  V+
Sbjct: 559 LGDLQGALTDLNQALQLQPHWASAYILRADVY 590



 Score = 73.2 bits (178), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 85/414 (20%), Positives = 172/414 (41%), Gaps = 41/414 (9%)

Query: 134 IKVN-----AHIKRAVVHLHAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYE 188
           IK+N     A+  R ++      D+  A AD + A +++PN A +YY RG  +   G Y+
Sbjct: 54  IKLNPNFAEAYHNRGIILTDQLKDYRGAIADFNRAIEINPNFATAYYHRGNAHYFLGDYQ 113

Query: 189 EALRNLDKTIALNPN---FHVARAQRHFVVHKMIVPGDRERVEQSLKEFRNFVDTHSNVV 245
            A+ + ++ + ++PN   F+ +R   +F +         E+ ++++ ++   ++T + + 
Sbjct: 114 GAIADYNQALEIDPNLAQFYHSRGNAYFAL---------EKYDKAIADYIQTIETSTQLA 164

Query: 246 EACTL--------FAQVLVDQEDFDGAEEYFNRSIRVDPENASLYVHRAMLMLQARGNVD 297
           +   +           V  ++ D  GA   F ++++  P  A+ Y +R  +     GN  
Sbjct: 165 DNINIDIANAYHNRGVVCFEKGDRQGAIADFQQALQWYPNFAAAYSNRGNIH-HILGNFK 223

Query: 298 EAIKLIEKAISIDKSCMFAYETLGTIEVQRGRLEEAVKCFNKALPLARDEAELSHIYSLR 357
           EAI   ++A+ +D     AY   G         + A+  +N+AL +       +  Y  R
Sbjct: 224 EAIADHDRALQLDPKLAEAYHNRGNAHYSLENYQSAIADYNRALEI---NPRFAGAYYNR 280

Query: 358 DAAIAQMK----VCERYNIKKKVSPRSQNITKNEKLAIKQLRENNDIIIRPADKGGKTVV 413
              +A +K      E +N   K +P        E+  ++   E+ +  I   D+  +   
Sbjct: 281 GLVLAHLKEYHRAIEDFNQALKFNPDDVQ-AYCERGLVRSTLEDYEGAIADYDRALQENP 339

Query: 414 MDKADYTQKMTSILNSNDYEIIPGDPTKTIE----ESEKYGNLENESGQKHAASDFTKAF 469
                Y  +  ++    DY+    D  + ++     +E Y    + +  + +  D   A 
Sbjct: 340 TLALVYGFRANALRRLGDYQGAIEDSNRLLQLNPSLAEGYC---DRAAARRSLGDHKGAI 396

Query: 470 ADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQR 523
            D D A +++  +A +YY RG         + A+ +  + I L P F  A   R
Sbjct: 397 KDYDRALQINDQLAAAYYGRGIAREALKDLQGAIDDNTQAIELVPEFSQAYCNR 450



 Score = 63.9 bits (154), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 64/269 (23%), Positives = 117/269 (43%), Gaps = 25/269 (9%)

Query: 258 QEDFDGAEEYFNRSIRVDPENASLYVHRAMLMLQARGNVDEAIKLIEKAISIDKSCMFAY 317
           Q D+  A   + ++I+++P  A  Y +R +++     +   AI    +AI I+ +   AY
Sbjct: 40  QGDYQEANAAYTQAIKLNPNFAEAYHNRGIILTDQLKDYRGAIADFNRAIEINPNFATAY 99

Query: 318 ETLGTIEVQRGRLEEAVKCFNKALPLARDEAELSHIYSLRDAAIAQMKVCERYNIKKKVS 377
              G      G  + A+  +N+AL +   +  L+  Y  R  A   +   E+Y+  K ++
Sbjct: 100 YHRGNAHYFLGDYQGAIADYNQALEI---DPNLAQFYHSRGNAYFAL---EKYD--KAIA 151

Query: 378 PRSQNITKNEKLAIKQLRENNDIIIRPADKGGKTVVMDKADYTQKMTSILNSNDYEIIPG 437
              Q I  + +LA     +N +I I  A      V  +K D    +         + +  
Sbjct: 152 DYIQTIETSTQLA-----DNINIDIANAYHNRGVVCFEKGDRQGAIADFQ-----QALQW 201

Query: 438 DPTKTIEESEKYGNLENESGQKHAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFG 497
            P      S + GN+       H   +F +A AD D A ++DP +A++Y+ RG  +    
Sbjct: 202 YPNFAAAYSNR-GNIH------HILGNFKEAIADHDRALQLDPKLAEAYHNRGNAHYSLE 254

Query: 498 QYEEALRNLDKTIALNPNFHVARAQRHFV 526
            Y+ A+ + ++ + +NP F  A   R  V
Sbjct: 255 NYQSAIADYNRALEINPRFAGAYYNRGLV 283



 Score = 62.8 bits (151), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 88/378 (23%), Positives = 147/378 (38%), Gaps = 55/378 (14%)

Query: 151 SDFTKAFADLDEAEKVDPNVADSYYQRGQIYC-LFGQYEEALRNLDKTIALNPNFHVARA 209
            D+ +A A   +A K++PN A++Y+ RG I       Y  A+ + ++ I +NPNF  A  
Sbjct: 41  GDYQEANAAYTQAIKLNPNFAEAYHNRGIILTDQLKDYRGAIADFNRAIEINPNFATAYY 100

Query: 210 QR----HFVVHKMIVPGDRERVEQSLKEFRNFVDTHSNVVEACTLFAQVLVDQEDFDGAE 265
            R    +F+        D  +  +       F  +  N   A   + + + D        
Sbjct: 101 HRGNAHYFLGDYQGAIADYNQALEIDPNLAQFYHSRGNAYFALEKYDKAIADYIQTIETS 160

Query: 266 EYFNRSIRVDPENASLYVHRAMLMLQARGNVDEAIKLIEKAISIDKSCMFAYETLGTIEV 325
                +I +D  NA  Y +R ++  + +G+   AI   ++A+    +   AY   G I  
Sbjct: 161 TQLADNINIDIANA--YHNRGVVCFE-KGDRQGAIADFQQALQWYPNFAAAYSNRGNIHH 217

Query: 326 QRGRLEEAVKCFNKALPLARDEAELSHI-----YSLRD--AAIAQMKVCERYNIKKKVSP 378
             G  +EA+   ++AL L    AE  H      YSL +  +AIA       YN   +++P
Sbjct: 218 ILGNFKEAIADHDRALQLDPKLAEAYHNRGNAHYSLENYQSAIAD------YNRALEINP 271

Query: 379 RSQNITKNEKLAIKQLRENNDIIIRPADKGGKTVVMDKADYTQKMTSILNSNDYEIIPGD 438
           R      N  L +  L+E +  I                D+ Q +         +  P D
Sbjct: 272 RFAGAYYNRGLVLAHLKEYHRAI---------------EDFNQAL---------KFNPDD 307

Query: 439 PTKTIEESEKYGNLENESGQKHAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQ 498
                E       LE          D+  A AD D A + +P +A  Y  R       G 
Sbjct: 308 VQAYCERGLVRSTLE----------DYEGAIADYDRALQENPTLALVYGFRANALRRLGD 357

Query: 499 YEEALRNLDKTIALNPNF 516
           Y+ A+ + ++ + LNP+ 
Sbjct: 358 YQGAIEDSNRLLQLNPSL 375



 Score = 48.9 bits (115), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 78/361 (21%), Positives = 139/361 (38%), Gaps = 65/361 (18%)

Query: 171 ADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQRHFVVHKMIVPGDRERVEQS 230
           A+ +  +G  + L G Y+EA     + I LNPNF  A   R  +            +   
Sbjct: 27  AEEFLNQGLNHSLQGDYQEANAAYTQAIKLNPNFAEAYHNRGII------------LTDQ 74

Query: 231 LKEFRNFVDTHSNVVEACTLFAQVLVDQ-------EDFDGAEEYFNRSIRVDPENASLYV 283
           LK++R  +   +  +E    FA     +        D+ GA   +N+++ +DP  A  Y 
Sbjct: 75  LKDYRGAIADFNRAIEINPNFATAYYHRGNAHYFLGDYQGAIADYNQALEIDPNLAQFY- 133

Query: 284 HRAMLMLQARGNVDEAIKLIEKAI-----SIDKSCMFAYETLGTIEVQRGRLEEAVKCFN 338
                   +RGN   A++  +KAI     +I+ S   A      I++        V CF 
Sbjct: 134 -------HSRGNAYFALEKYDKAIADYIQTIETSTQLADNI--NIDIANAYHNRGVVCFE 184

Query: 339 KALPLARDEAELSHIYSLRDAAIAQMKVCERY--NIKKKVSPRS--QNITKNEKLAIKQL 394
           K                 R  AIA  +   ++  N     S R    +I  N K AI   
Sbjct: 185 K---------------GDRQGAIADFQQALQWYPNFAAAYSNRGNIHHILGNFKEAIA-- 227

Query: 395 RENNDIIIRPADKGGKTVVMDKADYTQKMTSILNSNDYEIIPGDPTKTIEESEKYGNLEN 454
             ++D  ++   K  +        Y  +  +  +  +Y+    D  + +E + ++     
Sbjct: 228 --DHDRALQLDPKLAEA-------YHNRGNAHYSLENYQSAIADYNRALEINPRFAGAYY 278

Query: 455 ESGQKHA-ASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALN 513
             G   A   ++ +A  D ++A K +P+   +Y +RG +      YE A+ + D+ +  N
Sbjct: 279 NRGLVLAHLKEYHRAIEDFNQALKFNPDDVQAYCERGLVRSTLEDYEGAIADYDRALQEN 338

Query: 514 P 514
           P
Sbjct: 339 P 339


>gi|333996917|ref|YP_004529529.1| hypothetical protein TREPR_3648 [Treponema primitia ZAS-2]
 gi|333741255|gb|AEF86745.1| tetratricopeptide repeat protein [Treponema primitia ZAS-2]
          Length = 450

 Score = 85.5 bits (210), Expect = 7e-14,   Method: Compositional matrix adjust.
 Identities = 75/290 (25%), Positives = 134/290 (46%), Gaps = 23/290 (7%)

Query: 64  LLSKAKRAFEHEDYLTAIRHCTEEIESTSSNHTKALARLLRATVYIFTSQSTKAIEDLTQ 123
           L +  K  + H     AIR  T  I +   ++T+A   L R   Y +  +   AI D T 
Sbjct: 124 LANSGKGEYHH-----AIRDYTATI-NIDPDYTQAY--LNRGQAYCYKGKLDLAITDYTL 175

Query: 124 LVEDTSVDPKIKVNAHIKRAVVHLHAA----SDFTKAFADLDEAEKVDPNVADSYYQRGQ 179
            +     DP I  +A+I R + +   A    S   +A  D   A  +DPN  D+Y  RG 
Sbjct: 176 AIR---SDP-INTDAYIHRGLAYEVKAFIKKSKHGQAIEDFTIAINIDPNNVDAYTHRGN 231

Query: 180 IYCLFGQYEEALRNLDKTIALNPNFHVARAQRHFVVHKMIVPGDRERVEQSLKEFRNFVD 239
            Y   G Y+ A+ + D+ I +N N+ +A   R    +K    GD    + ++K+F   + 
Sbjct: 232 AYNYDGDYDRAITDFDQAIRINSNYAIAYINRGNSHYK---KGDD---DLAIKDFTMAIS 285

Query: 240 THSNVVEACTLFAQVLVDQEDFDGAEEYFNRSIRVDPENASLYVHRAMLMLQARGNVDEA 299
              N  +A T        + ++  A E + ++I ++P++ + Y  R  +  + +G+ + A
Sbjct: 286 IDPNDADAYTYRGDAYSRKREYRKAIEDYTQAININPDDINAYKTRGRIYYK-KGDYNRA 344

Query: 300 IKLIEKAISIDKSCMFAYETLGTIEVQRGRLEEAVKCFNKALPLARDEAE 349
           I+   + I I+     AY + G I  + G  ++A++ + +A+ +A D AE
Sbjct: 345 IEDYTQVIGINPDDAVAYNSRGIIYYKNGDYDQAIEDYTQAINIAPDYAE 394



 Score = 81.3 bits (199), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 107/477 (22%), Positives = 206/477 (43%), Gaps = 50/477 (10%)

Query: 49  VELTNGDTNESHELDLLSKAKRAFEHEDYLTAIRHCTEEIESTSSNHTKALARLLRATVY 108
           V+ ++ DT E+ +   +S  K+     +Y +AI   T+ I+    +   A +   R   Y
Sbjct: 6   VDSSSPDTAEAFKNRGVSFEKKG----EYDSAIADYTQAIKLDPCD---AFSLFFRGRTY 58

Query: 109 IFTSQSTKAIEDLTQLVEDTSVDPKIKVNAHIKRAVVHLHAASDFTKAFADLDEAEKVDP 168
           I    S +A  D TQ     ++DP + V    + +  +     D  +       A  ++P
Sbjct: 59  IKMGNSDQARADFTQA---NNIDPNLAVLLKNQSSAYYHKGNYDIARWLCTF--AIMLNP 113

Query: 169 NVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNF---HVARAQRHFVVHKMIVPGDRE 225
           N A +Y+  G      G+Y  A+R+   TI ++P++   ++ R Q +    K+    D  
Sbjct: 114 NDAAAYFLHGLANSGKGEYHHAIRDYTATINIDPDYTQAYLNRGQAYCYKGKL----DLA 169

Query: 226 RVEQSLKEFRNFVDTHSNVVEACTLFAQVLVDQEDFDGAEEYFNRSIRVDPENASLYVHR 285
             + +L    + ++T + +        +  + +     A E F  +I +DP N   Y HR
Sbjct: 170 ITDYTLAIRSDPINTDAYIHRGLAYEVKAFIKKSKHGQAIEDFTIAINIDPNNVDAYTHR 229

Query: 286 AMLMLQARGNVDEAIKLIEKAISIDKSCMFAYETLGTIEVQRGRLEEAVKCFNKALPLAR 345
                   G+ D AI   ++AI I+ +   AY   G    ++G  + A+K F  A+ +  
Sbjct: 230 GN-AYNYDGDYDRAITDFDQAIRINSNYAIAYINRGNSHYKKGDDDLAIKDFTMAISIDP 288

Query: 346 DEAELSHIYSLRDAAIAQMKVCERYNIKKKVSPRSQNITKNEKLAIKQLRENNDIIIRPA 405
           ++A+    Y+ R  A ++ +       +K +   +Q I  N           +DI    A
Sbjct: 289 NDADA---YTYRGDAYSRKR-----EYRKAIEDYTQAININP----------DDI---NA 327

Query: 406 DKGGKTVVMDKADYTQKMTSILNSNDY-EIIPGDPTKTIEESEKYGNLENESGQ-KHAAS 463
            K    +   K DY + +       DY ++I  +P   +  + + G +  ++G    A  
Sbjct: 328 YKTRGRIYYKKGDYNRAIE------DYTQVIGINPDDAVAYNSR-GIIYYKNGDYDQAIE 380

Query: 464 DFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVAR 520
           D+T+A     +  + + N+A ++  RG  Y     YE+AL + ++ I+++PN++ AR
Sbjct: 381 DYTQAINIAPDYAEANLNLAMAHNSRGIKYTKCHDYEQALDDFNQAISVDPNYYDAR 437



 Score = 51.2 bits (121), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 88/400 (22%), Positives = 152/400 (38%), Gaps = 59/400 (14%)

Query: 140 IKRAVVHLHAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIA 199
            K   V      ++  A AD  +A K+DP  A S + RG+ Y   G  ++A  +  +   
Sbjct: 17  FKNRGVSFEKKGEYDSAIADYTQAIKLDPCDAFSLFFRGRTYIKMGNSDQARADFTQANN 76

Query: 200 LNPNFHVA-RAQRHFVVHKMIVPGDRERVEQSLKEFRNFVDTHSNVVEACTLFAQVLVDQ 258
           ++PN  V  + Q     HK    G+ + + + L  F   +    N  +A   F   L + 
Sbjct: 77  IDPNLAVLLKNQSSAYYHK----GNYD-IARWLCTFAIML----NPNDAAAYFLHGLANS 127

Query: 259 EDFDGAEEY------FNRSIRVDPENASLYVHRAMLMLQARGNVDEAIKLIEKAISIDKS 312
               G  EY      +  +I +DP+    Y++R       +G +D AI     AI  D  
Sbjct: 128 ----GKGEYHHAIRDYTATINIDPDYTQAYLNRGQAYCY-KGKLDLAITDYTLAIRSDPI 182

Query: 313 CMFAYETLGTIE-----VQRGRLEEAVKCFNKALPLARDEAELSHIYSLRDAAIAQMKVC 367
              AY   G        +++ +  +A++ F  A+ +  +  +    Y+ R  A       
Sbjct: 183 NTDAYIHRGLAYEVKAFIKKSKHGQAIEDFTIAINIDPNNVDA---YTHRGNAYNYDGDY 239

Query: 368 ERYNIKKKVSPRSQNITKNEKLAIKQLRENNDIIIRPADKGGKTVVMDKADYTQKMTSIL 427
           +R      ++   Q I  N   AI  +   N        KG   + +   D+T  ++   
Sbjct: 240 DR-----AITDFDQAIRINSNYAIAYINRGN----SHYKKGDDDLAI--KDFTMAISIDP 288

Query: 428 NSNDYEIIPGDPTKTIEESEKYGNLENESGQKHAASDFTKAFADLDEAEKVDPNVADSYY 487
           N  D     GD      E                   + KA  D  +A  ++P+  ++Y 
Sbjct: 289 NDADAYTYRGDAYSRKRE-------------------YRKAIEDYTQAININPDDINAYK 329

Query: 488 QRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQRHFVW 527
            RG+IY   G Y  A+ +  + I +NP+  VA   R  ++
Sbjct: 330 TRGRIYYKKGDYNRAIEDYTQVIGINPDDAVAYNSRGIIY 369


>gi|425464999|ref|ZP_18844309.1| Tetratricopeptide repeat protein (fragment) [Microcystis aeruginosa
           PCC 9809]
 gi|389832848|emb|CCI23201.1| Tetratricopeptide repeat protein (fragment) [Microcystis aeruginosa
           PCC 9809]
          Length = 437

 Score = 85.5 bits (210), Expect = 7e-14,   Method: Compositional matrix adjust.
 Identities = 102/430 (23%), Positives = 194/430 (45%), Gaps = 53/430 (12%)

Query: 87  EIESTSSNHTKALARLLRATVYIFTSQSTKAIEDLTQLVEDTSVDPKIKVNAHIKRAVVH 146
           E      N+  A+    R   YI   +   A+ + T+ +   ++DP+    A+  R +++
Sbjct: 34  ETRIAQGNNQDAIGHYNRGVGYIQQKKYDLALAEFTKAI---NIDPRY-AEAYSNRGLLY 89

Query: 147 LHAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHV 206
           L        A +D ++A  ++P +A++Y  RG +Y + G+ + AL + ++ + +NP   +
Sbjct: 90  LQQEKP-DLALSDFNQALNINPRLAEAYNGRGFLYGVQGKPDLALSDYNQALNINPRLAL 148

Query: 207 ARAQRHFVVHKMIVPGDRERVEQSLKEFRNFVDTHSNVVEACTLFAQVLVDQEDFDGAEE 266
           A + R  +  +      +E+ + +L EF   ++ +  + EA      +  +Q   D A  
Sbjct: 149 AYSNRGNLYRQ------QEKPDLALAEFNKALNINPRLAEAYYNRGLLYYEQGKPDLALS 202

Query: 267 YFNRSIRVDPENASLYVHRAMLMLQARGNVDEAIKLIEKAISIDKSCMFAYETLGTIEVQ 326
            FN++I ++P  A  Y +R  L  Q +G  D A+    +AI+I+     AY   G +  +
Sbjct: 203 DFNQAININPRFAEAYNNRGFLYRQ-QGKPDLALSDYNQAININPRYATAYNNRGFLYAE 261

Query: 327 RGRLEEAVKCFNKALPLARDEAELSHIYSLRDAAIAQMKVCERYNIKKK----VSPRSQN 382
           +G+ + A+  FN+AL +      L   YS R            Y+I+ K    +S  +Q 
Sbjct: 262 QGKPDLALSDFNQALNI---NPRLDLAYSNRGLL---------YDIQGKPDLALSDYNQA 309

Query: 383 ITKNEKLAIKQLRENNDIIIRPADKGGKTVVMDKADYTQKMTSILNSNDYEIIPGDPTKT 442
           +  N + A   L  NN   +    K GK+ +   +DY Q +              +P   
Sbjct: 310 LNINPRFA---LAYNNRGTLY--YKQGKSDLA-LSDYNQALNI------------NPRLA 351

Query: 443 IEESEKYGNLENESGQKHAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEA 502
           +    + G L  E G+    +D   A +D ++A  ++P  A++Y  RG +Y    + E+A
Sbjct: 352 LAYYNR-GTLYYEQGK----ADL--ALSDFNQALNINPRFAEAYSNRGVLYYYRLEREKA 404

Query: 503 LRNLDKTIAL 512
           +R+L +   L
Sbjct: 405 IRDLRQAAEL 414



 Score = 80.1 bits (196), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 89/406 (21%), Positives = 174/406 (42%), Gaps = 49/406 (12%)

Query: 138 AHIKRAVVHLHAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKT 197
            H  R V ++     +  A A+  +A  +DP  A++Y  RG +Y    + + AL + ++ 
Sbjct: 47  GHYNRGVGYIQQ-KKYDLALAEFTKAINIDPRYAEAYSNRGLLYLQQEKPDLALSDFNQA 105

Query: 198 IALNPNFHVARAQRHFVVHKMIVPGDRERVEQSLKEFRNFVDTHSNVVEACTLFAQVLVD 257
           + +NP    A   R F+       G + + + +L ++   ++ +  +  A +    +   
Sbjct: 106 LNINPRLAEAYNGRGFLY------GVQGKPDLALSDYNQALNINPRLALAYSNRGNLYRQ 159

Query: 258 QEDFDGAEEYFNRSIRVDPENASLYVHRAMLMLQARGNVDEAIKLIEKAISIDKSCMFAY 317
           QE  D A   FN+++ ++P  A  Y +R +L  + +G  D A+    +AI+I+     AY
Sbjct: 160 QEKPDLALAEFNKALNINPRLAEAYYNRGLLYYE-QGKPDLALSDFNQAININPRFAEAY 218

Query: 318 ETLGTIEVQRGRLEEAVKCFNKALPLARDEAELSHIYSLRDAAIAQMK----VCERYNIK 373
              G +  Q+G+ + A+  +N+A+ +       +  Y+ R    A+          +N  
Sbjct: 219 NNRGFLYRQQGKPDLALSDYNQAINI---NPRYATAYNNRGFLYAEQGKPDLALSDFNQA 275

Query: 374 KKVSPRSQNITKNEKLAIKQLRENNDIIIRPADKGGKTVVMDKADYTQKMTSILNSNDYE 433
             ++PR      N  L         DI  +P         +  +DY Q +          
Sbjct: 276 LNINPRLDLAYSNRGLLY-------DIQGKPD--------LALSDYNQALNI-------- 312

Query: 434 IIPGDPTKTIEESEKYGNLENESGQKHAASDFTKAFADLDEAEKVDPNVADSYYQRGQIY 493
               +P   +  + + G L  + G+    SD   A +D ++A  ++P +A +YY RG +Y
Sbjct: 313 ----NPRFALAYNNR-GTLYYKQGK----SDL--ALSDYNQALNINPRLALAYYNRGTLY 361

Query: 494 CLFGQYEEALRNLDKTIALNPNFHVARAQRHFVWTSTLAELMAFSD 539
              G+ + AL + ++ + +NP F  A + R  ++   L    A  D
Sbjct: 362 YEQGKADLALSDFNQALNINPRFAEAYSNRGVLYYYRLEREKAIRD 407


>gi|296127341|ref|YP_003634593.1| hypothetical protein [Brachyspira murdochii DSM 12563]
 gi|296019157|gb|ADG72394.1| TPR repeat-containing protein [Brachyspira murdochii DSM 12563]
          Length = 750

 Score = 85.1 bits (209), Expect = 9e-14,   Method: Compositional matrix adjust.
 Identities = 108/458 (23%), Positives = 197/458 (43%), Gaps = 67/458 (14%)

Query: 119 EDLTQLVEDTSVDPKIKVNAHIKRAVVHLHAASDFTKAFADLDEAEKVDPNVADSYYQ-- 176
           E L  L +   ++P   ++A+   A   LH  +   +A + L++A ++ PN AD+Y++  
Sbjct: 230 ESLEYLKKALEINPNF-IDAYYDIAFA-LHKLNLNDEALSYLEKALQISPNNADTYFKIF 287

Query: 177 ---------RGQIYCL-----------------------FGQYEEALRNLDKTIALNPNF 204
                     G + CL                          YEEAL  L+K + ++ N 
Sbjct: 288 LIKRALGDYDGALSCLEKILEIDDTDVAIYNEIALIKIELELYEEALYYLNKALCIDNNN 347

Query: 205 HVARAQRHFVVHKMIVPGDRERVEQSLKEFRNFVDTHSNVVEACTLFAQVLVDQEDFDGA 264
                    V H       +   E+++K F   ++ ++++  A         +  D++ A
Sbjct: 348 AEIYNTIGLVYHY------KRNYEEAIKNFNKALELNTSMDMAYYNIGLSYYEMHDYEKA 401

Query: 265 EEYFNRSIRVDPENASLYVHRAMLMLQARGNVDEAIKLIEKAISIDKSCMFAYETLGTIE 324
            EY+N+++ ++ + ++ Y++   L+    GN  EAI   ++A+ I+ +   +Y  +   E
Sbjct: 402 IEYYNKALEINTQYSAAYINLG-LIEHNFGNYQEAINYYKRALEINPNYSLSYYNIALAE 460

Query: 325 VQRGRLEEAVKCFNKALPLARDEAEL----SHIYSLRDAAIAQMKVCERYNIKKKVSPRS 380
           +     ++A++ FN AL L  +EA++      IYS R+A     K  E YN   +++P  
Sbjct: 461 MSLEDYDKALEDFNHALELGYNEADIYTNIGLIYS-REAIYD--KAIEYYNKVLEINPNK 517

Query: 381 QNITKNEKLAI------KQLRENNDIIIRPADKGGKTVVMDKADYTQKMTSILNSNDYEI 434
            N   N    +      K+  E  D +IR    G   V  ++  YT+   S      YE 
Sbjct: 518 VNAYYNIAFCLSNMDKYKEALEIYDKVIRMY-PGNFDVYYERG-YTKYRVS-----KYEE 570

Query: 435 IPGDPTKTIEESEKYGNLENESG-QKHAASDFTKAFADLDEAEKVDPNVADSYYQRGQIY 493
              D    I  + K+ N     G  K    ++ +A  D D+A + +PN  D Y ++   Y
Sbjct: 571 AIRDFDIIINVNSKHYNAYYYRGCSKKYLKNYDEAIKDFDKAIEYNPNNPDYYSEKASCY 630

Query: 494 CLFGQYEEALRNLDKTIALNPN---FHVARAQRHFVWT 528
               +Y E++ N DK I LN N    ++ RA+  F+ +
Sbjct: 631 DYLNKYRESIENYDKAIELNDNDWFLYILRAKEKFLLS 668



 Score = 65.5 bits (158), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 84/355 (23%), Positives = 154/355 (43%), Gaps = 64/355 (18%)

Query: 54  GDTNESHELDLLSKAKRAFEHEDYLTAIRHCTEEI----ESTSSNHTKALARL------- 102
            ++N S E +LL+KAK +FE++DY  AI +  + I    +S    H + LA+L       
Sbjct: 2   NNSNNSIE-ELLNKAKESFENKDYEKAIEYIDKVIFYNGDSYDLYHNRGLAKLNLRLYEG 60

Query: 103 ------------------LRATVYIFTSQSTKAIEDLTQLVE-DTSVDPKIKVNAHIKRA 143
                              R     + +   +AIED  ++VE D S       N  I   
Sbjct: 61  AIKDFDRAIELGDYNSYYERGLAKFYMAFYKEAIEDFNKVVELDKSSAASFAYNT-IGLC 119

Query: 144 VVHLHAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPN 203
             +L   ++F +A    ++A + +PN+  +Y+    +    G  +EAL  L+K + ++ N
Sbjct: 120 KYNL---NEFDEALKYYNKAIETNPNLIIAYHNIALLKHSMGLDDEALSYLNKALEIDTN 176

Query: 204 --------------FHVARAQRHFVVHKM-IVPGD---RERV----------EQSLKEFR 235
                           + R    ++   M + P D    +R+          E+SL+  +
Sbjct: 177 NIETYLKIYSIKLGLGLEREANEYLDKIMEMYPDDLYIYDRIGNIKIDAGYMEESLEYLK 236

Query: 236 NFVDTHSNVVEACTLFAQVLVDQEDFDGAEEYFNRSIRVDPENASLYVHRAMLMLQARGN 295
             ++ + N ++A    A  L      D A  Y  +++++ P NA  Y  +  L+ +A G+
Sbjct: 237 KALEINPNFIDAYYDIAFALHKLNLNDEALSYLEKALQISPNNADTYF-KIFLIKRALGD 295

Query: 296 VDEAIKLIEKAISIDKSCMFAYETLGTIEVQRGRLEEAVKCFNKALPLARDEAEL 350
            D A+  +EK + ID + +  Y  +  I+++    EEA+   NKAL +  + AE+
Sbjct: 296 YDGALSCLEKILEIDDTDVAIYNEIALIKIELELYEEALYYLNKALCIDNNNAEI 350



 Score = 40.4 bits (93), Expect = 2.7,   Method: Compositional matrix adjust.
 Identities = 66/318 (20%), Positives = 126/318 (39%), Gaps = 80/318 (25%)

Query: 238 VDTHSNVVEACTLFAQVLVDQEDFDGAEEYFNRSIRVDPENASLYVHRAMLMLQAR---- 293
           ++  +N +E     A+   + +D++ A EY ++ I  + ++  LY +R +  L  R    
Sbjct: 1   MNNSNNSIEELLNKAKESFENKDYEKAIEYIDKVIFYNGDSYDLYHNRGLAKLNLRLYEG 60

Query: 294 -----------GNVD----------------EAIKLIEKAISIDKSCM--FAYETLGTIE 324
                      G+ +                EAI+   K + +DKS    FAY T+G  +
Sbjct: 61  AIKDFDRAIELGDYNSYYERGLAKFYMAFYKEAIEDFNKVVELDKSSAASFAYNTIGLCK 120

Query: 325 VQRGRLEEAVKCFNKALPL-------ARDEAELSHIYSLRDAAIAQMKVCERYNIKKKVS 377
                 +EA+K +NKA+           + A L H   L D A++ +         K + 
Sbjct: 121 YNLNEFDEALKYYNKAIETNPNLIIAYHNIALLKHSMGLDDEALSYL--------NKALE 172

Query: 378 PRSQNITKNEKLAIKQLRENNDIIIRPADKGGKTVVMDKADYTQKMTSILNSNDYEIIPG 437
             + NI    K+   +L              G  +  +  +Y  K+         E+ P 
Sbjct: 173 IDTNNIETYLKIYSIKL--------------GLGLEREANEYLDKIM--------EMYPD 210

Query: 438 DPTKTIEESEKYGNLENESGQKHAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFG 497
           D    +   ++ GN++ ++G    + ++ K      +A +++PN  D+YY          
Sbjct: 211 D----LYIYDRIGNIKIDAGYMEESLEYLK------KALEINPNFIDAYYDIAFALHKLN 260

Query: 498 QYEEALRNLDKTIALNPN 515
             +EAL  L+K + ++PN
Sbjct: 261 LNDEALSYLEKALQISPN 278


>gi|414078463|ref|YP_006997781.1| hypothetical protein ANA_C13292 [Anabaena sp. 90]
 gi|413971879|gb|AFW95968.1| TPR repeat-containing protein [Anabaena sp. 90]
          Length = 1150

 Score = 85.1 bits (209), Expect = 9e-14,   Method: Compositional matrix adjust.
 Identities = 105/430 (24%), Positives = 183/430 (42%), Gaps = 53/430 (12%)

Query: 117  AIEDLTQLVEDTSVDPKIKVNAHIKRAVVHLHAASDFTKAFADLDEAEKVDPNVADSYYQ 176
            AI+D TQ ++   ++P     A+  R +V  +   D   A  D ++A +++PN A +YY 
Sbjct: 714  AIDDYTQAIK---INPNY-AKAYNNRGIVR-NELGDKPGAIDDYNQAIRINPNYALAYYN 768

Query: 177  RGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQRHFVVHKMIVPGDRERVEQSLKEFRN 236
            RG +    G  + A+ +    I +NPN+  A   R  V +++   GD+     ++ ++  
Sbjct: 769  RGNVRYELGDKQGAIDDYTLAIKINPNYANAYYNRGIVRYEL---GDK---PGAIDDYNL 822

Query: 237  FVDTHSNVVEACTLFAQVLVDQEDFDGAEEYFNRSIRVDPENASLYVHRAMLMLQARGNV 296
             +  + N  +A      V  D  D  GA + +N++I+ +P +A  Y +R ++  +  G+ 
Sbjct: 823  AIKFNPNYAQAYYNRGIVRDDLGDKPGAIDDYNQAIKFNPNDAQAYYNRGIVRYEL-GDK 881

Query: 297  DEAIKLIEKAISIDKSCMFAYETLGTIEVQRGRLEEAVKCFNKALPLARDEAELSHIY-S 355
              AI    +AI  + +   AY   G++    G  + A+  + +A+    ++A   +   S
Sbjct: 882  PGAIDDYTQAIKFNPNDANAYYGRGSVRNDLGDKQGAIDDYTQAIKFNPNDANAYYGRGS 941

Query: 356  LRDAAIAQMKVCERYNIKKKVSPRSQNITKNEKLAIKQLRENNDIIIRPADKGGKTVVMD 415
            +R+    +    + Y    K +P   N   N      +L             G K   +D
Sbjct: 942  VRNDLGDKQGAIDDYTQAIKFNPNDANAYYNRGFVRNEL-------------GDKQGAID 988

Query: 416  KADYTQKMTSILNSNDY---EIIP---GDPTKTIEE---SEKY----------GNLENES 456
              DYT  +    N   Y    I+    GD    I++   + KY          G + NE 
Sbjct: 989  --DYTLAIKYNPNYAAYYNRGIVRNELGDKQGAIDDYTLAIKYNPNYAAYYNRGIVRNEL 1046

Query: 457  GQKHAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNF 516
            G K  A D      D   A K++PN AD+YY RG +    G  + A+ +    I  NPN+
Sbjct: 1047 GDKQGAID------DYTLAIKINPNYADAYYNRGFVRNELGDKQGAIDDYTLAIKYNPNY 1100

Query: 517  HVARAQRHFV 526
              A  +R  V
Sbjct: 1101 AQAYVRRGSV 1110



 Score = 76.3 bits (186), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 116/490 (23%), Positives = 196/490 (40%), Gaps = 75/490 (15%)

Query: 49  VELTNGDTNESHELDLLSKAKRAFEHEDYLTAIRHCTEEIES--TSSNHTKALARLLRAT 106
           V+++ G+T  S  L          E  + L  +R   E I++   + N       L    
Sbjct: 550 VDVSQGNTTASQWL----------ERGNQLWRLRRYPEAIQAFDAAINQKPKFIHLAYYG 599

Query: 107 VYIFTSQSTKAIEDLTQLVEDTSVDPKIKVNAHIKRAVVHLHAASDFTKAFADLDEAEKV 166
             +    S K  E +T L +     P   V A    + V+   ++   KA A +++A ++
Sbjct: 600 KGLALGSSGKYPEAITALQQAVKSQPDF-VPAWDYLSSVY-RESNQLDKALAAINQAIQL 657

Query: 167 DPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQRHFVVHKMIV------ 220
            PN  + Y Q+  +     +Y+EA   ++K I L+P       +  F  ++ IV      
Sbjct: 658 QPNNPNLYNQKRGVLSDLKKYKEAAAAINKAIELSP-------RAAFYYNQGIVRYELGD 710

Query: 221 -PGDRERVEQSLKEFRNFVDTHSNVVEACTLFAQVLVDQE--DFDGAEEYFNRSIRVDPE 277
            PG  +   Q++K   N+   ++N         + +V  E  D  GA + +N++IR++P 
Sbjct: 711 KPGAIDDYTQAIKINPNYAKAYNN---------RGIVRNELGDKPGAIDDYNQAIRINPN 761

Query: 278 NASLYVHRAMLMLQARGNVDEAIKLIEKAISIDKSCMFAYETLGTIEVQRGRLEEAVKCF 337
            A  Y +R  +  +  G+   AI     AI I+ +   AY   G +  + G    A+  +
Sbjct: 762 YALAYYNRGNVRYEL-GDKQGAIDDYTLAIKINPNYANAYYNRGIVRYELGDKPGAIDDY 820

Query: 338 NKALPLARDEAELSHIYSL-RDAAIAQMKVCERYNIKKKVSPRSQNITKNEKLAIKQLRE 396
           N A+    + A+  +   + RD    +    + YN   K +P       N  +   +L  
Sbjct: 821 NLAIKFNPNYAQAYYNRGIVRDDLGDKPGAIDDYNQAIKFNPNDAQAYYNRGIVRYEL-- 878

Query: 397 NNDIIIRPADKGGKTVVMDKADYTQKMTSILNSNDYEIIPGDPTKTIEESEKYGNLENES 456
                      G K   +D  DYTQ +    N ND     G            G++ N+ 
Sbjct: 879 -----------GDKPGAID--DYTQAIK--FNPNDANAYYGR-----------GSVRNDL 912

Query: 457 GQKHAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNF 516
           G K  A D      D  +A K +PN A++YY RG +    G  + A+ +  + I  NPN 
Sbjct: 913 GDKQGAID------DYTQAIKFNPNDANAYYGRGSVRNDLGDKQGAIDDYTQAIKFNPND 966

Query: 517 HVARAQRHFV 526
             A   R FV
Sbjct: 967 ANAYYNRGFV 976



 Score = 46.2 bits (108), Expect = 0.042,   Method: Compositional matrix adjust.
 Identities = 30/104 (28%), Positives = 54/104 (51%), Gaps = 2/104 (1%)

Query: 138  AHIKRAVVHLHAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKT 197
            A+  R +V  +   D   A  D   A K++PN AD+YY RG +    G  + A+ +    
Sbjct: 1035 AYYNRGIVR-NELGDKQGAIDDYTLAIKINPNYADAYYNRGFVRNELGDKQGAIDDYTLA 1093

Query: 198  IALNPNFHVARAQRHFVVHKMI-VPGDRERVEQSLKEFRNFVDT 240
            I  NPN+  A  +R  V +++   PG +E ++++ + F++  +T
Sbjct: 1094 IKYNPNYAQAYVRRGSVRYQLGDKPGAKEDLQRAAQLFKDQGNT 1137


>gi|118381868|ref|XP_001024094.1| TPR Domain containing protein [Tetrahymena thermophila]
 gi|89305861|gb|EAS03849.1| TPR Domain containing protein [Tetrahymena thermophila SB210]
          Length = 850

 Score = 85.1 bits (209), Expect = 9e-14,   Method: Compositional matrix adjust.
 Identities = 86/386 (22%), Positives = 163/386 (42%), Gaps = 64/386 (16%)

Query: 142 RAVVHLHAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALN 201
           +A +   +   F +A     +A ++DP   ++Y  RG       QY+EA++N +K + +N
Sbjct: 8   QAGLTQQSQGKFQEAVNSYSKAIELDPQYTEAYCNRGVALNSLNQYQEAIKNYNKALEIN 67

Query: 202 PNFHVARAQRHFVVHKMIVPGDRERVEQSLKEFRNFVDTHSNVVEACTLFAQVLVDQ--- 258
           PN+ +A   +   +             Q+LK+ +  +  ++ VVE    + Q  +++   
Sbjct: 68  PNYKLAYYNKGISL-------------QALKQLQEAISCYTKVVEIDPNYKQAHLNKGLC 114

Query: 259 ----EDFDGAEEYFNRSIRVDPENASLYVHRAMLMLQARGNVDEAIKLIEKAISIDKSCM 314
                 F  A   FN++++ DP+  SL  +   L  Q  G   +A+   +KAI++D +  
Sbjct: 115 FFNLNQFQEALNNFNKALQCDPK-YSLACYNIALSYQKLGQSQQALTYYDKAINLDPNYK 173

Query: 315 FAYETLGTIEVQRGRLEEAVKCFNKALPLARDEAELSHIYSLRDAAIAQMKVCERYNIKK 374
            AY   G + +  G+ ++A++ F + +                                 
Sbjct: 174 NAYLNRGLLYMNEGQKQQALQDFRQIIA-------------------------------- 201

Query: 375 KVSPRSQNITKNEKLAIKQLRENNDIIIRPADKGGKTVVMDK----ADYTQKMTSILNSN 430
            + P+  N   N  L ++QL +N + I        K + +DK    A Y + +       
Sbjct: 202 -IDPKFTNAYINVGLTLQQLGQNQEAI----QHYDKAIQIDKNAFLAYYNKAILCKQLGK 256

Query: 431 DYEIIPGDPTKTIEESEKYGNLENESGQKHAASD-FTKAFADLDEAEKVDPNVADSYYQR 489
           + E +  +  K IE +  Y N     G     S  + +A  + D+  ++DPN    YY +
Sbjct: 257 NQEAL-NNYNKVIEINPNYSNAYLNKGSLFLFSGKYEEAIKNYDKVIQLDPNHKQVYYNK 315

Query: 490 GQIYCLFGQYEEALRNLDKTIALNPN 515
           G      G+Y+E++ N +K I L+PN
Sbjct: 316 GISLKALGRYQESIENYNKAIQLDPN 341



 Score = 66.2 bits (160), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 54/232 (23%), Positives = 110/232 (47%), Gaps = 12/232 (5%)

Query: 112 SQSTKAIEDLTQLVEDTSVDPKIKVNAHIKRAVVHLHAASDFTKAFADLDEAEKVDPNVA 171
           +Q  +AI++  + +E   ++P  K+ A+  + +  L A     +A +   +  ++DPN  
Sbjct: 51  NQYQEAIKNYNKALE---INPNYKL-AYYNKGI-SLQALKQLQEAISCYTKVVEIDPNYK 105

Query: 172 DSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQRHFVVHKMIVPGDRERVEQSL 231
            ++  +G  +    Q++EAL N +K +  +P + +A         K+       + +Q+L
Sbjct: 106 QAHLNKGLCFFNLNQFQEALNNFNKALQCDPKYSLACYNIALSYQKL------GQSQQAL 159

Query: 232 KEFRNFVDTHSNVVEACTLFAQVLVDQEDFDGAEEYFNRSIRVDPENASLYVHRAMLMLQ 291
             +   ++   N   A      + +++     A + F + I +DP+  + Y++   L LQ
Sbjct: 160 TYYDKAINLDPNYKNAYLNRGLLYMNEGQKQQALQDFRQIIAIDPKFTNAYINVG-LTLQ 218

Query: 292 ARGNVDEAIKLIEKAISIDKSCMFAYETLGTIEVQRGRLEEAVKCFNKALPL 343
             G   EAI+  +KAI IDK+   AY     +  Q G+ +EA+  +NK + +
Sbjct: 219 QLGQNQEAIQHYDKAIQIDKNAFLAYYNKAILCKQLGKNQEALNNYNKVIEI 270



 Score = 65.9 bits (159), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 85/399 (21%), Positives = 174/399 (43%), Gaps = 46/399 (11%)

Query: 130 VDPKIKVNAHIKRAVVHLHAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEE 189
           +DP+    A+  R V  L++ + + +A  + ++A +++PN   +YY +G       Q +E
Sbjct: 32  LDPQY-TEAYCNRGVA-LNSLNQYQEAIKNYNKALEINPNYKLAYYNKGISLQALKQLQE 89

Query: 190 ALRNLDKTIALNPNFHVARAQRHFVVHKMIVPGDRERVEQSLKEFRNFVDTHSNVVEACT 249
           A+    K + ++PN+  A       ++K +   +  + +++L  F   +        AC 
Sbjct: 90  AISCYTKVVEIDPNYKQAH------LNKGLCFFNLNQFQEALNNFNKALQCDPKYSLACY 143

Query: 250 LFAQVLVDQEDFDGAEEYFNRSIRVDPENASLYVHRAMLMLQARGNVDEAIKLIEKAISI 309
             A           A  Y++++I +DP   + Y++R +L +   G   +A++   + I+I
Sbjct: 144 NIALSYQKLGQSQQALTYYDKAINLDPNYKNAYLNRGLLYMN-EGQKQQALQDFRQIIAI 202

Query: 310 DKSCMFAYETLGTIEVQRGRLEEAVKCFNKALPLARDEAELSHIYSLRDAAIAQMKVCER 369
           D     AY  +G    Q G+ +EA++ ++KA+ + ++ A L++     + AI    +C++
Sbjct: 203 DPKFTNAYINVGLTLQQLGQNQEAIQHYDKAIQIDKN-AFLAYY----NKAI----LCKQ 253

Query: 370 YNIKKKVSPRSQNITKNEKLAIKQLRENNDII-IRPADKGGKTVVMDKADYTQKMTSILN 428
                        + KN++     L   N +I I P              Y  K +  L 
Sbjct: 254 -------------LGKNQEA----LNNYNKVIEINPNYSNA---------YLNKGSLFLF 287

Query: 429 SNDYEIIPGDPTKTIEESEKYGNLENESG-QKHAASDFTKAFADLDEAEKVDPNVADSYY 487
           S  YE    +  K I+    +  +    G    A   + ++  + ++A ++DPN      
Sbjct: 288 SGKYEEAIKNYDKVIQLDPNHKQVYYNKGISLKALGRYQESIENYNKAIQLDPNNCKIQN 347

Query: 488 QRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQRHFV 526
            +G      G+ ++AL   +K I ++P F ++ A R  V
Sbjct: 348 NKGLALEALGKSQDALDCYNKAIQIDPFFTLSYANRALV 386



 Score = 64.7 bits (156), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 61/277 (22%), Positives = 111/277 (40%), Gaps = 78/277 (28%)

Query: 100 ARLLRATVYIFTSQSTKAIEDLTQLVEDTSVDPKIKVNAHI------------KRAVVHL 147
           A L R  +Y+   Q  +A++D  Q++   ++DPK   NA+I            + A+ H 
Sbjct: 175 AYLNRGLLYMNEGQKQQALQDFRQII---AIDPKF-TNAYINVGLTLQQLGQNQEAIQHY 230

Query: 148 HAASDFTK---------------------AFADLDEAEKVDPNVADSYYQRGQIYCLFGQ 186
             A    K                     A  + ++  +++PN +++Y  +G ++   G+
Sbjct: 231 DKAIQIDKNAFLAYYNKAILCKQLGKNQEALNNYNKVIEINPNYSNAYLNKGSLFLFSGK 290

Query: 187 YEEALRNLDKTIALNPNFHVARAQRHFVVHKMIVPGDRERVEQSLKEFRNFVDTHSNVVE 246
           YEEA++N DK I L+PN       +    +K I      R ++S+               
Sbjct: 291 YEEAIKNYDKVIQLDPN------HKQVYYNKGISLKALGRYQESI--------------- 329

Query: 247 ACTLFAQVLVDQEDFDGAEEYFNRSIRVDPENASLYVHRAMLMLQARGNVDEAIKLIEKA 306
                              E +N++I++DP N  +  ++  L L+A G   +A+    KA
Sbjct: 330 -------------------ENYNKAIQLDPNNCKIQNNKG-LALEALGKSQDALDCYNKA 369

Query: 307 ISIDKSCMFAYETLGTIEVQRGRLEEAVKCFNKALPL 343
           I ID     +Y     +    G  ++AV+   +A  L
Sbjct: 370 IQIDPFFTLSYANRALVNFNLGNKDQAVEDMKQASKL 406


>gi|425447925|ref|ZP_18827906.1| Tetratricopeptide repeat protein (fragment) [Microcystis aeruginosa
           PCC 9443]
 gi|389731403|emb|CCI04529.1| Tetratricopeptide repeat protein (fragment) [Microcystis aeruginosa
           PCC 9443]
          Length = 991

 Score = 84.7 bits (208), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 65/250 (26%), Positives = 123/250 (49%), Gaps = 18/250 (7%)

Query: 104 RATVYIFTSQSTKAIEDLTQLVEDTSVDPKIKVNAHIKRAVVHLHAASDFTK---AFADL 160
           R  +Y    +   AI D +Q ++   ++P +   A+  R +++    SD  K   A +D 
Sbjct: 692 RGVLYSDLQKYDLAISDYSQAID---INPNL-AEAYYNRGILY----SDLQKYDLALSDF 743

Query: 161 DEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQRHFVVHKMIV 220
            +A  ++PN+A++Y  RG  Y    +Y+ AL + DK I +N N  VA   R  +      
Sbjct: 744 SKAIDINPNLAEAYLNRGVFYYNQQKYDLALSDYDKAIDINRNDAVAYYNRGLLYF---- 799

Query: 221 PGDRERVEQSLKEFRNFVDTHSNVVEACTLFAQVLVDQEDFDGAEEYFNRSIRVDPENAS 280
             D ++ + +L ++   +D + ++ EA      +  + + +D A   +N++IR++P  A 
Sbjct: 800 --DLQKYDLALSDYDKAIDINHDLAEAYLGRGLLYYNLQKYDLALADYNQAIRINPNLAE 857

Query: 281 LYVHRAMLMLQARGNVDEAIKLIEKAISIDKSCMFAYETLGTIEVQRGRLEEAVKCFNKA 340
            Y +R +L    +   + A+    KAI ++K    A   +G I+ ++G + EA + F KA
Sbjct: 858 AYGNRGVLYYNQQ-KYELALSDYSKAIELNKDAFIAMTNIGLIKYEQGAINEAAEQFKKA 916

Query: 341 LPLARDEAEL 350
           L +    AE+
Sbjct: 917 LSINNQSAEI 926



 Score = 60.5 bits (145), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 60/273 (21%), Positives = 126/273 (46%), Gaps = 13/273 (4%)

Query: 80  AIRHCTEEIESTSSNHTKALARLLRATVYIFTSQSTKAIEDLTQLVEDTSVDPKIKVNAH 139
           AI+   E I+   S++   LA   +        +   AIE L Q +        +K N H
Sbjct: 561 AIKAFDEAIKQNESDNVY-LAWYGKGLALFALDKDQPAIEALQQAINTLPKREDLK-NFH 618

Query: 140 ---IKRAVVHLHAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDK 196
              ++R  V      ++ +A   +++A  + PN  +SY ++  +     +Y+E L  + +
Sbjct: 619 SSILQRQSVVYRYLENYEQALTVINQAISLFPNNPNSYNEKSSVLNQLNRYDEGLAAITQ 678

Query: 197 TIALNPNFHVARAQRHFVVHKMIVPGDRERVEQSLKEFRNFVDTHSNVVEACTLFAQVLV 256
            I L P     RA  ++  ++ ++  D ++ + ++ ++   +D + N+ EA      +  
Sbjct: 679 AINLAP-----RAAWYY--NRGVLYSDLQKYDLAISDYSQAIDINPNLAEAYYNRGILYS 731

Query: 257 DQEDFDGAEEYFNRSIRVDPENASLYVHRAMLMLQARGNVDEAIKLIEKAISIDKSCMFA 316
           D + +D A   F+++I ++P  A  Y++R +     +   D A+   +KAI I+++   A
Sbjct: 732 DLQKYDLALSDFSKAIDINPNLAEAYLNRGVFYYNQQ-KYDLALSDYDKAIDINRNDAVA 790

Query: 317 YETLGTIEVQRGRLEEAVKCFNKALPLARDEAE 349
           Y   G +     + + A+  ++KA+ +  D AE
Sbjct: 791 YYNRGLLYFDLQKYDLALSDYDKAIDINHDLAE 823



 Score = 59.7 bits (143), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 37/155 (23%), Positives = 83/155 (53%), Gaps = 7/155 (4%)

Query: 156 AFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQRHFVV 215
           A +D D+A  ++ ++A++Y  RG +Y    +Y+ AL + ++ I +NPN   A   R  + 
Sbjct: 807 ALSDYDKAIDINHDLAEAYLGRGLLYYNLQKYDLALADYNQAIRINPNLAEAYGNRGVLY 866

Query: 216 HKMIVPGDRERVEQSLKEFRNFVDTHSNVVEACTLFAQVLVDQEDFDGAEEYFNRSIRVD 275
           +      ++++ E +L ++   ++ + +   A T    +  +Q   + A E F +++ ++
Sbjct: 867 Y------NQQKYELALSDYSKAIELNKDAFIAMTNIGLIKYEQGAINEAAEQFKKALSIN 920

Query: 276 PENASLYVHRAMLMLQARGNVDEAIKLIEKAISID 310
            ++A + +  A++    +G  D+A+KL E A+ ID
Sbjct: 921 NQSAEIQLALAVVFYH-QGEKDKALKLAESALKID 954



 Score = 55.1 bits (131), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 80/366 (21%), Positives = 162/366 (44%), Gaps = 32/366 (8%)

Query: 171 ADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQRHFVVHKMIVPGDRERVE-- 228
           AD + QRG      G++EEA++  D+ I  N + +V  A     +    +  D+  +E  
Sbjct: 542 ADIWIQRGGQLWRLGRFEEAIKAFDEAIKQNESDNVYLAWYGKGLALFALDKDQPAIEAL 601

Query: 229 ----QSLKEFRNFVDTHSNVVEACTLFAQVLVDQEDFDGAEEYFNRSIRVDPENASLYVH 284
                +L +  +  + HS++++  ++  + L   E+++ A    N++I + P N + Y  
Sbjct: 602 QQAINTLPKREDLKNFHSSILQRQSVVYRYL---ENYEQALTVINQAISLFPNNPNSYNE 658

Query: 285 RAMLMLQARGNVDEAIKLIEKAISIDKSCMFAYETLGTIEVQRGRLEEAVKCFNKALPLA 344
           ++ ++ Q     DE +  I +AI++     + Y   G +     + + A+  +++A+ + 
Sbjct: 659 KSSVLNQLN-RYDEGLAAITQAINLAPRAAWYYNR-GVLYSDLQKYDLAISDYSQAIDI- 715

Query: 345 RDEAELSHIYSLRDAAIAQMKVCERYNIKKKVSPRSQNITKNEKLAIKQL--------RE 396
                L+  Y  R    + +   ++Y++   +S  S+ I  N  LA   L        ++
Sbjct: 716 --NPNLAEAYYNRGILYSDL---QKYDLA--LSDFSKAIDINPNLAEAYLNRGVFYYNQQ 768

Query: 397 NNDIIIRPADKGGKTVVMDKADYTQKMTSILNSNDYEIIPGDPTKTIEESEKYGNLENES 456
             D+ +   DK       D   Y  +     +   Y++   D  K I+ +      E   
Sbjct: 769 KYDLALSDYDKAIDINRNDAVAYYNRGLLYFDLQKYDLALSDYDKAIDINHDLA--EAYL 826

Query: 457 GQKHAASDFTK---AFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALN 513
           G+     +  K   A AD ++A +++PN+A++Y  RG +Y    +YE AL +  K I LN
Sbjct: 827 GRGLLYYNLQKYDLALADYNQAIRINPNLAEAYGNRGVLYYNQQKYELALSDYSKAIELN 886

Query: 514 PNFHVA 519
            +  +A
Sbjct: 887 KDAFIA 892



 Score = 47.8 bits (112), Expect = 0.016,   Method: Compositional matrix adjust.
 Identities = 27/80 (33%), Positives = 42/80 (52%), Gaps = 3/80 (3%)

Query: 463 SDFTK---AFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVA 519
           SD  K   A +D  +A  ++PN+A++YY RG +Y    +Y+ AL +  K I +NPN   A
Sbjct: 697 SDLQKYDLAISDYSQAIDINPNLAEAYYNRGILYSDLQKYDLALSDFSKAIDINPNLAEA 756

Query: 520 RAQRHFVWTSTLAELMAFSD 539
              R   + +     +A SD
Sbjct: 757 YLNRGVFYYNQQKYDLALSD 776



 Score = 46.2 bits (108), Expect = 0.048,   Method: Compositional matrix adjust.
 Identities = 31/144 (21%), Positives = 73/144 (50%), Gaps = 7/144 (4%)

Query: 138 AHIKRAVVHLHAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKT 197
           A++ R +++ +    +  A AD ++A +++PN+A++Y  RG +Y    +YE AL +  K 
Sbjct: 824 AYLGRGLLY-YNLQKYDLALADYNQAIRINPNLAEAYGNRGVLYYNQQKYELALSDYSKA 882

Query: 198 IALNPNFHVARAQRHFVVHKMIVPGDRERVEQSLKEFRNFVDTHSNVVEACTLFAQVLVD 257
           I LN +  +A      + +      ++  + ++ ++F+  +  ++   E     A V   
Sbjct: 883 IELNKDAFIAMTNIGLIKY------EQGAINEAAEQFKKALSINNQSAEIQLALAVVFYH 936

Query: 258 QEDFDGAEEYFNRSIRVDPENASL 281
           Q + D A +    ++++D + A++
Sbjct: 937 QGEKDKALKLAESALKIDSQFANI 960



 Score = 41.2 bits (95), Expect = 1.6,   Method: Compositional matrix adjust.
 Identities = 27/80 (33%), Positives = 41/80 (51%), Gaps = 3/80 (3%)

Query: 463 SDFTK---AFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVA 519
           SD  K   A +D  +A  ++PN+A++Y  RG  Y    +Y+ AL + DK I +N N  VA
Sbjct: 731 SDLQKYDLALSDFSKAIDINPNLAEAYLNRGVFYYNQQKYDLALSDYDKAIDINRNDAVA 790

Query: 520 RAQRHFVWTSTLAELMAFSD 539
              R  ++       +A SD
Sbjct: 791 YYNRGLLYFDLQKYDLALSD 810


>gi|298244298|ref|ZP_06968104.1| Tetratricopeptide TPR_2 repeat protein [Ktedonobacter racemifer DSM
           44963]
 gi|297551779|gb|EFH85644.1| Tetratricopeptide TPR_2 repeat protein [Ktedonobacter racemifer DSM
           44963]
          Length = 517

 Score = 84.7 bits (208), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 107/490 (21%), Positives = 203/490 (41%), Gaps = 74/490 (15%)

Query: 99  LARLLRATVYIFTSQSTKAIEDLTQLVEDTSVDPKIKVNAHIKRAVVHLHAASDFTKAFA 158
            A   RA  Y       +A+ +  + +E   +DP + +  H++  +       DF +AF+
Sbjct: 31  FAYFNRALSYDLLGDFQQALVNYDKAIE---LDPSLAMAYHLRGKIYAKR--KDFLQAFS 85

Query: 159 DLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQRHFVVHKM 218
           +  +A K+DP+ AD YY +G  Y L G   +A+RN +K I L+P+  +    R     ++
Sbjct: 86  NYSQAIKLDPSCADFYYYQGNAYALIGYPRQAVRNYNKAIELDPSDAIYYCNRGIAYFEL 145

Query: 219 IVPGDRERVEQSLKEFRNFVDTHSNVVEACTLFAQVLVDQEDFDGAEEYFNRSIRVDP-- 276
                   ++Q+L      ++   ++  A  L  ++     D       +N++I++DP  
Sbjct: 146 ------NELKQALTNCNKAIELDPSLAMAYHLRGKIYTKLGDSQQGLLNYNQAIKLDPSL 199

Query: 277 ------------------ENASL-YVHRAMLMLQARGNVDEAIKLIEKAISIDKSCMFAY 317
                             ++ S+ YV+  +   +A G++ +A+   +KAI +D S   AY
Sbjct: 200 EKTSSKPAETEGSDSFVEDSFSINYVNIGIDYAEA-GDIQKALSNFKKAIELDPSDSIAY 258

Query: 318 ETLGTIEVQRGRLEEAVKCFNKALPLARDEAELSHIYSLRDA--AIAQM-KVCERYNIKK 374
              G    + G L+ A+  + +++ L  + +    IY L DA   I    +    YN   
Sbjct: 259 YNCGLAYEKLGDLQLAIVNYGRSIEL--NPSYFWAIYKLADAYQEIGDYQQALISYNQAI 316

Query: 375 KVSPRSQNITKNEKLAIKQLRE--------NNDIIIRP----ADKGGKTVVMDKADYTQK 422
            + P    I  N  +A ++L +           I + P    A         +  D+ Q 
Sbjct: 317 NLKPLKAEIYNNRGVAYEKLGDWQLAIVNYRQSIELNPSYFRAIYNLAVAYQEIGDFEQA 376

Query: 423 MTS-------------ILNSND---------YEIIPGDPTKTIEESEKYGNLENESGQKH 460
           + S             I N+           Y+ I  D +++I+ +  +       G  H
Sbjct: 377 LISYNQAIKLEPLKADIYNNRGNVYHKLGIVYQAIV-DYSQSIKLNPSHPITYFNRGGSH 435

Query: 461 AA-SDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVA 519
           A   +  +A  D   A ++DP+ A++Y+ R QIY   G+ ++A+ + DK   L P+    
Sbjct: 436 AKLGNIEQAIEDYSRAIELDPSFANAYFSRAQIYDAIGELQQAIGDYDKAFKLKPSLVTT 495

Query: 520 RAQRHFVWTS 529
             + H  ++S
Sbjct: 496 YEKAHTSFSS 505



 Score = 63.2 bits (152), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 51/200 (25%), Positives = 91/200 (45%), Gaps = 21/200 (10%)

Query: 151 SDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQ 210
           S+F +A    D+A ++DP    +Y+ R   Y L G +++AL N DK I L+P+  +A   
Sbjct: 10  SNFEQAILYYDKAIELDPAHIFAYFNRALSYDLLGDFQQALVNYDKAIELDPSLAMA--- 66

Query: 211 RHFVVHKMIVPGDRERVEQSLKEFRNFVDTHSNVVE---ACTLFAQVLVDQEDFDG---- 263
            H           R ++    K+F      +S  ++   +C  F     +     G    
Sbjct: 67  YHL----------RGKIYAKRKDFLQAFSNYSQAIKLDPSCADFYYYQGNAYALIGYPRQ 116

Query: 264 AEEYFNRSIRVDPENASLYVHRAMLMLQARGNVDEAIKLIEKAISIDKSCMFAYETLGTI 323
           A   +N++I +DP +A  Y +R +   +    + +A+    KAI +D S   AY   G I
Sbjct: 117 AVRNYNKAIELDPSDAIYYCNRGIAYFELN-ELKQALTNCNKAIELDPSLAMAYHLRGKI 175

Query: 324 EVQRGRLEEAVKCFNKALPL 343
             + G  ++ +  +N+A+ L
Sbjct: 176 YTKLGDSQQGLLNYNQAIKL 195



 Score = 56.2 bits (134), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 78/351 (22%), Positives = 143/351 (40%), Gaps = 69/351 (19%)

Query: 177 RGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQRHFVVHKMIVPGDRERVEQSLKEFRN 236
           RG +      +E+A+   DK I L+P    A   R      +   GD    +Q+L  +  
Sbjct: 2   RGNVCIKLSNFEQAILYYDKAIELDPAHIFAYFNRALSYDLL---GD---FQQALVNYDK 55

Query: 237 FVDTHSNVVEACTLFAQVLVDQEDFDGAEEYFNRSIRVDPENASLYVHR--AMLMLQARG 294
            ++   ++  A  L  ++   ++DF  A   ++++I++DP  A  Y ++  A  ++   G
Sbjct: 56  AIELDPSLAMAYHLRGKIYAKRKDFLQAFSNYSQAIKLDPSCADFYYYQGNAYALI---G 112

Query: 295 NVDEAIKLIEKAISIDKSCMFAYETLGTIEVQRGRLEEAVKCFNKALPLARDEAELSHIY 354
              +A++   KAI +D S    Y   G    +   L++A+   NKA+ L   +  L+  Y
Sbjct: 113 YPRQAVRNYNKAIELDPSDAIYYCNRGIAYFELNELKQALTNCNKAIEL---DPSLAMAY 169

Query: 355 SLRDAAIAQMKVCER----YNIKKKVSPRSQNITKNEKLAIKQLRENNDIIIRPAD-KGG 409
            LR     ++   ++    YN   K+ P  +  +                  +PA+ +G 
Sbjct: 170 HLRGKIYTKLGDSQQGLLNYNQAIKLDPSLEKTSS-----------------KPAETEGS 212

Query: 410 KTVVMDKADYTQKMTSILNSNDYEIIPGDPTKTIEESEKYGNLENESGQKHA-ASDFTKA 468
            + V D                              S  Y N+    G  +A A D  KA
Sbjct: 213 DSFVEDSF----------------------------SINYVNI----GIDYAEAGDIQKA 240

Query: 469 FADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVA 519
            ++  +A ++DP+ + +YY  G  Y   G  + A+ N  ++I LNP++  A
Sbjct: 241 LSNFKKAIELDPSDSIAYYNCGLAYEKLGDLQLAIVNYGRSIELNPSYFWA 291



 Score = 44.3 bits (103), Expect = 0.15,   Method: Compositional matrix adjust.
 Identities = 26/77 (33%), Positives = 42/77 (54%)

Query: 463 SDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQ 522
           S+F +A    D+A ++DP    +Y+ R   Y L G +++AL N DK I L+P+  +A   
Sbjct: 10  SNFEQAILYYDKAIELDPAHIFAYFNRALSYDLLGDFQQALVNYDKAIELDPSLAMAYHL 69

Query: 523 RHFVWTSTLAELMAFSD 539
           R  ++      L AFS+
Sbjct: 70  RGKIYAKRKDFLQAFSN 86


>gi|254413092|ref|ZP_05026864.1| tetratricopeptide repeat domain protein [Coleofasciculus
           chthonoplastes PCC 7420]
 gi|196180256|gb|EDX75248.1| tetratricopeptide repeat domain protein [Coleofasciculus
           chthonoplastes PCC 7420]
          Length = 1179

 Score = 84.7 bits (208), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 84/405 (20%), Positives = 169/405 (41%), Gaps = 48/405 (11%)

Query: 128 TSVDPKIKVN-----AHIKRAVVHLHAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYC 182
            S D  I++N     + I R+   L     + +    LD+A K++ +   ++ +R     
Sbjct: 231 ASYDKAIEINPGEYGSWILRSFA-LDKLEKYEEVVTSLDQALKINSHEYYAWNRRAIGLD 289

Query: 183 LFGQYEEALRNLDKTIALNPNFHVARAQRHFVVHKMIVPGDRERVEQSLKEFRNFVDTHS 242
             G++EEA+ + DK I +NP+ + A   + FV+HK+       + E+++      +  + 
Sbjct: 290 KLGKHEEAIASYDKAIKINPDDYTAWRNKGFVLHKL------GKYEEAISSLDQALKINP 343

Query: 243 NVVEACTLFAQVLVDQEDFDGAEEYFNRSIRVDPENASLYVHRAMLMLQARGNVDEAIKL 302
           +    C L    L     +  A   +N++I+++P++ + +++R    L   G   EA+  
Sbjct: 344 DQYYFCILRGCALDKLGKYSEALASYNQAIQINPDDYTAWINRGS-ALDKLGKYSEALAS 402

Query: 303 IEKAISIDKSCMFAYETLGTIEVQRGRLEEAVKCFNKALPLARDEAELSHIYSLRDAAIA 362
             +A+ I+     A+   G      G+ EEA+  F+K + +  D+               
Sbjct: 403 YNQALEINSDEYSAWNLRGKTLNNLGKYEEAITSFDKVIEINSDDY-------------- 448

Query: 363 QMKVCERYNIKKKVSPRSQNITKNEKLAIKQLRENNDIIIRPADKGGKTVVMDKADYTQK 422
                                  N  LA+ +L +    +    DK  +    +   +  +
Sbjct: 449 -------------------TAWVNRGLALNELGKYEKALAS-YDKALEINPNEYYTWNNQ 488

Query: 423 MTSILNSNDYEIIPGDPTKTIE-ESEKYGNLENESGQKHAASDFTKAFADLDEAEKVDPN 481
             ++ N   YE       K +E   + Y  L N SG       +++     D+A +++P+
Sbjct: 489 GNALFNLGKYEKALASYDKALEINPDGYTVLNNRSGVLCNLGKYSEMITSCDQAIEINPD 548

Query: 482 VADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQRHFV 526
              ++  RG      GQYEEAL + +K I +NP++++A + R + 
Sbjct: 549 YYMAWSNRGFGLYNLGQYEEALASCNKAIEINPDYYMAWSNRGWA 593



 Score = 83.6 bits (205), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 91/441 (20%), Positives = 185/441 (41%), Gaps = 54/441 (12%)

Query: 128 TSVDPKIKVNAHIKRAV----VHLHAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCL 183
            S D  I++N+    A     + L     +  A A  D+A +++P+    +  RG     
Sbjct: 129 VSFDKAIEINSDYYYAWNGRGLALDELGKYENAIASYDKALEINPDDYKIWGNRGLALNN 188

Query: 184 FGQYEEALRNLDKTIALNPNFHVARAQRHFVVHKMIVPGDRERVEQSLKEFRNFVDTHSN 243
            G+YE+A+ + DK I +NPN + A  +R   ++ +       + E ++  +   ++ +  
Sbjct: 189 LGKYEDAIASYDKAIEINPNNYKAWGKRGLALNNL------GKYEDAIASYDKAIEINPG 242

Query: 244 VVEACTLFAQVLVDQEDFDGAEEYFNRSIRVDPENASLYVHRAMLMLQARGNVDEAIKLI 303
              +  L +  L   E ++      +++++++      +  RA + L   G  +EAI   
Sbjct: 243 EYGSWILRSFALDKLEKYEEVVTSLDQALKINSHEYYAWNRRA-IGLDKLGKHEEAIASY 301

Query: 304 EKAISIDKSCMFAYETLGTIEVQRGRLEEAVKCFNKALPLARDEAELSHIYSLRDAAIAQ 363
           +KAI I+     A+   G +  + G+ EEA+   ++AL +  D+    +   LR  A+ +
Sbjct: 302 DKAIKINPDDYTAWRNKGFVLHKLGKYEEAISSLDQALKINPDQ---YYFCILRGCALDK 358

Query: 364 M----KVCERYNIKKKVSPRSQNITKNEKLAIKQLRENNDII-------------IRPAD 406
           +    +    YN   +++P       N   A+ +L + ++ +                 +
Sbjct: 359 LGKYSEALASYNQAIQINPDDYTAWINRGSALDKLGKYSEALASYNQALEINSDEYSAWN 418

Query: 407 KGGKTVVMDKADYTQKMTSI-----LNSNDYEIIP---------GDPTKTIEESEK---- 448
             GKT + +   Y + +TS      +NS+DY             G   K +   +K    
Sbjct: 419 LRGKT-LNNLGKYEEAITSFDKVIEINSDDYTAWVNRGLALNELGKYEKALASYDKALEI 477

Query: 449 ----YGNLENESGQKHAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALR 504
               Y    N+         + KA A  D+A +++P+       R  + C  G+Y E + 
Sbjct: 478 NPNEYYTWNNQGNALFNLGKYEKALASYDKALEINPDGYTVLNNRSGVLCNLGKYSEMIT 537

Query: 505 NLDKTIALNPNFHVARAQRHF 525
           + D+ I +NP++++A + R F
Sbjct: 538 SCDQAIEINPDYYMAWSNRGF 558



 Score = 57.4 bits (137), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 73/313 (23%), Positives = 135/313 (43%), Gaps = 52/313 (16%)

Query: 268 FNRSIRVDPENASLYVHRAMLMLQARGNVDEAIKLIEKAISIDKSCMFAYETLGTIEVQR 327
           F + ++ +P     +  R + + + +   +EAI   +KAI I+    +A+   G    + 
Sbjct: 97  FYQVLQREPHTYQDWRGRGLALSELK-RYEEAIVSFDKAIEINSDYYYAWNGRGLALDEL 155

Query: 328 GRLEEAVKCFNKALPLARDEAELSHIYSLRDAAIAQMKVCE----RYNIKKKVSPRSQNI 383
           G+ E A+  ++KAL +  D+ +   I+  R  A+  +   E     Y+   +++P +   
Sbjct: 156 GKYENAIASYDKALEINPDDYK---IWGNRGLALNNLGKYEDAIASYDKAIEINPNNYKA 212

Query: 384 TKNEKLAIKQLRENNDII--------IRPADKGG---KTVVMDKAD-YTQKMTSI----- 426
                LA+  L +  D I        I P + G    ++  +DK + Y + +TS+     
Sbjct: 213 WGKRGLALNNLGKYEDAIASYDKAIEINPGEYGSWILRSFALDKLEKYEEVVTSLDQALK 272

Query: 427 LNSNDY-----EIIPGDPTKTIEES------------EKYGNLENESGQKHAASDFTKAF 469
           +NS++Y       I  D     EE+            + Y    N+    H    + +A 
Sbjct: 273 INSHEYYAWNRRAIGLDKLGKHEEAIASYDKAIKINPDDYTAWRNKGFVLHKLGKYEEAI 332

Query: 470 ADLDEAEKVDPNVADSYY---QRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQRHFV 526
           + LD+A K++P   D YY    RG      G+Y EAL + ++ I +NP+ + A   R   
Sbjct: 333 SSLDQALKINP---DQYYFCILRGCALDKLGKYSEALASYNQAIQINPDDYTAWINR--- 386

Query: 527 WTSTLAELMAFSD 539
             S L +L  +S+
Sbjct: 387 -GSALDKLGKYSE 398



 Score = 46.2 bits (108), Expect = 0.041,   Method: Compositional matrix adjust.
 Identities = 31/139 (22%), Positives = 68/139 (48%), Gaps = 27/139 (19%)

Query: 153 FTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQRH 212
           +++     D+A +++P+   ++  RG      GQYEEAL + +K I +NP++++A + R 
Sbjct: 532 YSEMITSCDQAIEINPDYYMAWSNRGFGLYNLGQYEEALASCNKAIEINPDYYMAWSNRG 591

Query: 213 FVVHKMIVPGDRERVEQSLKEFRNFVDTHSNV---------------VEACTLFAQVLVD 257
           + + K+      +R +   K F+N+ D   N+                     + Q+ + 
Sbjct: 592 WALFKL------KRYQ---KAFKNWKDGIKNLNLDTPEHREGRSKLYYSEAQAYYQLGLK 642

Query: 258 QEDFDG---AEEYFNRSIR 273
           + D D    A++Y+N++++
Sbjct: 643 EADLDNLLQAKKYYNKALK 661


>gi|239946448|ref|ZP_04698204.1| tetratricopeptide TPR_2 [Rickettsia endosymbiont of Ixodes
           scapularis]
 gi|239920724|gb|EER20751.1| tetratricopeptide TPR_2 [Rickettsia endosymbiont of Ixodes
           scapularis]
          Length = 375

 Score = 84.3 bits (207), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 90/379 (23%), Positives = 165/379 (43%), Gaps = 50/379 (13%)

Query: 153 FTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQRH 212
           + +A  + ++A K+ P+    YY++G      G+YEEA+   DK+I+LNP +  A   + 
Sbjct: 29  YEEAIKEYNKAIKLKPDEDVLYYKKGNSLAFLGRYEEAIECYDKSISLNPEYADAYNNKG 88

Query: 213 FVVHKMIVPGDRERVEQSLKEFRNFVDTHSNVVEACTLF--AQVLVDQEDFDGAEEYFNR 270
                     D E+ E++L E+   ++   N  +AC+ +           ++ A + +N+
Sbjct: 89  NSFF------DLEKYEEALVEYDKAIELKPN--DACSYYNKGNSFYKLGKYEEAIKEYNK 140

Query: 271 SIRVDPENASLYVHRAMLMLQARGNVDEAIKLIEKAISIDKSCMFAYETLGTIEVQRGRL 330
           +I++ P+    Y ++ + +    G  +E+I   EKAI +       Y   GT     G+ 
Sbjct: 141 AIKLKPDYVESYYNKGISLYNI-GEYEESIIAYEKAIELKPDDADIYNNKGTSLFNLGQY 199

Query: 331 EEAVKCFNKALPLARDEAELSHIYSLRDAAIAQMKVCERYNIKKKVSPRSQNITKNEKL- 389
           EEA+K +NKA+ L  ++A +                         ++ +  +++  EK  
Sbjct: 200 EEAIKAYNKAIELNPNDAVV-------------------------INNKGTSLSDLEKYE 234

Query: 390 -AIKQLRENNDIIIRPADKGGKTVVMDKADYTQKMTSILNSNDYEIIPGDPTKTIEESEK 448
            AIK    N  I + P          D   Y  K  S      YE    +  K I+    
Sbjct: 235 EAIKCY--NQAIELNP---------NDACSYYNKGNSFYKLGKYEEAIKEYNKAIKLKPD 283

Query: 449 Y-GNLENESGQKHAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLD 507
           Y  +  N+    +   ++ ++    ++A ++ P+ AD Y  +G      G+YEEA++  +
Sbjct: 284 YVESYYNKGISLYNIGEYEESIIAYEKAIELKPDDADIYNNKGTSLFNLGEYEEAIKAYN 343

Query: 508 KTIALNPNFHVARAQRHFV 526
           K+I L P+F VA   R  V
Sbjct: 344 KSIELKPDFAVAINNRTIV 362



 Score = 72.8 bits (177), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 52/204 (25%), Positives = 100/204 (49%), Gaps = 11/204 (5%)

Query: 145 VHLHAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNF 204
           + L+   ++ ++    ++A ++ P+ AD Y  +G      GQYEEA++  +K I LNPN 
Sbjct: 157 ISLYNIGEYEESIIAYEKAIELKPDDADIYNNKGTSLFNLGQYEEAIKAYNKAIELNPND 216

Query: 205 HVARAQRHFVVHKMIVPGDRERVEQSLKEFRNFVDTHSNVVEACTLF--AQVLVDQEDFD 262
            V       + +K     D E+ E+++K +   ++ + N  +AC+ +           ++
Sbjct: 217 AVV------INNKGTSLSDLEKYEEAIKCYNQAIELNPN--DACSYYNKGNSFYKLGKYE 268

Query: 263 GAEEYFNRSIRVDPENASLYVHRAMLMLQARGNVDEAIKLIEKAISIDKSCMFAYETLGT 322
            A + +N++I++ P+    Y ++ + +    G  +E+I   EKAI +       Y   GT
Sbjct: 269 EAIKEYNKAIKLKPDYVESYYNKGISLYNI-GEYEESIIAYEKAIELKPDDADIYNNKGT 327

Query: 323 IEVQRGRLEEAVKCFNKALPLARD 346
                G  EEA+K +NK++ L  D
Sbjct: 328 SLFNLGEYEEAIKAYNKSIELKPD 351



 Score = 68.6 bits (166), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 88/351 (25%), Positives = 142/351 (40%), Gaps = 82/351 (23%)

Query: 170 VADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQRHFVVHKMIVPGDRERVEQ 229
            A  YY  GQ   L G+YEEA++  +K I L P+  V   ++                  
Sbjct: 12  AAKKYYDAGQALALRGRYEEAIKEYNKAIKLKPDEDVLYYKKG----------------N 55

Query: 230 SLKEFRNFVDTHSNVVEACTLFAQVLVDQEDFDGAEEYFNRSIRVDPENASLYVHRAMLM 289
           SL     F+  +   +E C                   +++SI ++PE A  Y ++    
Sbjct: 56  SLA----FLGRYEEAIE-C-------------------YDKSISLNPEYADAYNNKGNSF 91

Query: 290 LQARGNVDEAIKLIEKAISIDKSCMFAYETLGTIEVQRGRLEEAVKCFNKALPLARDEAE 349
                  +EA+   +KAI +  +   +Y   G    + G+ EEA+K +NKA+ L  D   
Sbjct: 92  FDLE-KYEEALVEYDKAIELKPNDACSYYNKGNSFYKLGKYEEAIKEYNKAIKLKPD--- 147

Query: 350 LSHIYSLRDAAIAQMKVCERYNIKKKVSPRSQNITKNEKLAIKQLRENNDIIIRPADKGG 409
             ++ S  +  I+   + E            ++I   EK           I ++P     
Sbjct: 148 --YVESYYNKGISLYNIGEY----------EESIIAYEKA----------IELKP----- 180

Query: 410 KTVVMDKAD-YTQKMTSILNSNDYEIIPGDPTKTIEESEKYGNLENESGQKHAASDFTK- 467
                D AD Y  K TS+ N   YE       K IE +     + N  G   + SD  K 
Sbjct: 181 -----DDADIYNNKGTSLFNLGQYEEAIKAYNKAIELNPNDAVVINNKGT--SLSDLEKY 233

Query: 468 --AFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNF 516
             A    ++A +++PN A SYY +G  +   G+YEEA++  +K I L P++
Sbjct: 234 EEAIKCYNQAIELNPNDACSYYNKGNSFYKLGKYEEAIKEYNKAIKLKPDY 284



 Score = 48.5 bits (114), Expect = 0.009,   Method: Compositional matrix adjust.
 Identities = 25/82 (30%), Positives = 45/82 (54%)

Query: 145 VHLHAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNF 204
           + L+   ++ ++    ++A ++ P+ AD Y  +G      G+YEEA++  +K+I L P+F
Sbjct: 293 ISLYNIGEYEESIIAYEKAIELKPDDADIYNNKGTSLFNLGEYEEAIKAYNKSIELKPDF 352

Query: 205 HVARAQRHFVVHKMIVPGDRER 226
            VA   R  V+ K+   GD  R
Sbjct: 353 AVAINNRTIVIEKLGSAGDATR 374


>gi|158335983|ref|YP_001517157.1| TPR repeat-containing serine/threonine protein kinase
           [Acaryochloris marina MBIC11017]
 gi|158306224|gb|ABW27841.1| serine/threonine kinase with TPR repeats [Acaryochloris marina
           MBIC11017]
          Length = 810

 Score = 84.3 bits (207), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 94/385 (24%), Positives = 169/385 (43%), Gaps = 39/385 (10%)

Query: 149 AASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVAR 208
           A   +  A +D +EA  +DP  A++Y  RG      G+YE A+ +  K I L PN    +
Sbjct: 421 ATGGYQAAISDYNEALTLDPKDAETYNHRGDAQVELGKYEAAIADYRKAIRLQPN----Q 476

Query: 209 AQRHFVVHKM-IVPGDRERVEQSLKEFRNFVDTHSNVVEACT---LFAQVLVDQEDFDGA 264
           AQ +  +  +  V G   ++E ++KE    +   SN + A      +  VL D E   GA
Sbjct: 477 AQGYLNLGSVFFVQG---KLEAAVKELDKAIQAESNHLSAHVNRGSYRSVLGDPE---GA 530

Query: 265 EEYFNRSIRVDPENASLYVHRAMLMLQARGNVD---EAIKLIEKAISIDKSCMFAYETLG 321
           E+ + +++++    A  Y  R      A+  +D   +AI    +A++I+     A+  LG
Sbjct: 531 EQDWEKALKLPVRTAKDYASRGY----AKSRLDRKQDAIADYNQALTINPQLTRAHTNLG 586

Query: 322 TIEVQRGRLEEAVKCFNKALPLARDEAELSHIYSLRDAAIAQM-------KVCERYNIKK 374
            +  ++G +E+A + F++AL +  +    +  Y LR    A            + Y+   
Sbjct: 587 GVFYEQGEIEQARQSFDQALQINPNS---TSAYLLRGELRAYQGQQADFEGALQDYDRAI 643

Query: 375 KVSPRSQNITKNEKLAIKQLRENNDIIIRPADKGGKTVVMDKADYTQKMTSILNSNDYEI 434
            ++P+   +  N   A+  L E    +    +KG +      A YT +    L    YE 
Sbjct: 644 AINPKDPFVLNNRCGALFSLNELQRALA-DCNKGLEINPSSAALYTVRGNIYLRLKQYEK 702

Query: 435 IPGDPTKTIE-------ESEKYGNLENESGQKHAASDFTKAFADLDEAEKVDPNVADSYY 487
              D  +TI+       E        N +  +    D   A  DL++A ++ P+ A+ YY
Sbjct: 703 AIQDYGRTIQINDTRKSEVRSQAAYSNRASARIQLKDLDGALQDLNDALRIKPDAAEDYY 762

Query: 488 QRGQIYCLFGQYEEALRNLDKTIAL 512
           +RG +Y +  + ++A+ +L K   L
Sbjct: 763 KRGLLYSVQNKRQDAITDLKKAADL 787



 Score = 62.0 bits (149), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 79/381 (20%), Positives = 159/381 (41%), Gaps = 37/381 (9%)

Query: 150 ASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARA 209
           + ++  A  + ++A ++  +  ++  + G+ Y   G+Y EA+   D  +   P    A  
Sbjct: 354 SGNWQSATENFEQALELKADYTEAALKLGETYAEIGKYPEAIAQFDTLLKQQPKTAAAFR 413

Query: 210 QRHFVVHKMIVPGDRERVEQSLKEFRNFVDTHSNVVEACTLFAQVLVDQEDFDGAEEYFN 269
           +R  +  +    G     + ++ ++   +       E         V+   ++ A   + 
Sbjct: 414 ERGEI--RFATGG----YQAAISDYNEALTLDPKDAETYNHRGDAQVELGKYEAAIADYR 467

Query: 270 RSIRVDPENASLYVHRAMLMLQARGNVDEAIKLIEKAISIDKSCMFAYETLGTIEVQRGR 329
           ++IR+ P  A  Y++   +    +G ++ A+K ++KAI  + + + A+   G+     G 
Sbjct: 468 KAIRLQPNQAQGYLNLGSVFF-VQGKLEAAVKELDKAIQAESNHLSAHVNRGSYRSVLGD 526

Query: 330 LEEAVKCFNKALPL----ARDEAELSHIYSLRDAAIAQMKVCERYNIKKKVSPRSQNITK 385
            E A + + KAL L    A+D A   +  S  D    +      YN    ++P+      
Sbjct: 527 PEGAEQDWEKALKLPVRTAKDYASRGYAKSRLDR---KQDAIADYNQALTINPQLTRAHT 583

Query: 386 N------EKLAIKQLRENND--IIIRPADKGGKTVVMDKADYTQKMTSILNS-NDYE--- 433
           N      E+  I+Q R++ D  + I P       +  +   Y  +      +  DY+   
Sbjct: 584 NLGGVFYEQGEIEQARQSFDQALQINPNSTSAYLLRGELRAYQGQQADFEGALQDYDRAI 643

Query: 434 -IIPGDPTKTIEESEKYGNLENESGQKHAASDFTKAFADLDEAEKVDPNVADSYYQRGQI 492
            I P DP            L N  G   + ++  +A AD ++  +++P+ A  Y  RG I
Sbjct: 644 AINPKDPFV----------LNNRCGALFSLNELQRALADCNKGLEINPSSAALYTVRGNI 693

Query: 493 YCLFGQYEEALRNLDKTIALN 513
           Y    QYE+A+++  +TI +N
Sbjct: 694 YLRLKQYEKAIQDYGRTIQIN 714



 Score = 49.7 bits (117), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 58/322 (18%), Positives = 129/322 (40%), Gaps = 56/322 (17%)

Query: 204 FHVARAQRHFVVHKMIVPGDRERVEQSLKEFRNFVDTHSNVVEACTLFAQVLVDQEDFDG 263
           F + R Q H+   +          + + + F   ++  ++  EA     +   +   +  
Sbjct: 336 FFLFRPQWHYFWGQQAA--QSGNWQSATENFEQALELKADYTEAALKLGETYAEIGKYPE 393

Query: 264 AEEYFNRSIRVDPENASLYVHRAMLMLQARGNVDEAIKLIEKAISIDKSCMFAYETLGTI 323
           A   F+  ++  P+ A+ +  R  +   A G    AI    +A+++D      Y   G  
Sbjct: 394 AIAQFDTLLKQQPKTAAAFRERGEIRF-ATGGYQAAISDYNEALTLDPKDAETYNHRGDA 452

Query: 324 EVQRGRLEEAVKCFNKALPLARDEAELSHIYSLRDAAIAQMKVCERYNIKKKVSPRSQNI 383
           +V+ G+ E A+  + KA+ L  ++A+              + +   + ++ K+       
Sbjct: 453 QVELGKYEAAIADYRKAIRLQPNQAQ------------GYLNLGSVFFVQGKL------- 493

Query: 384 TKNEKLAIKQLRENNDIIIRPADKGGKTVVMDKADYTQK--MTSILNSNDYEIIPGDPTK 441
               + A+K+L                    DKA   +   +++ +N   Y  + GDP  
Sbjct: 494 ----EAAVKEL--------------------DKAIQAESNHLSAHVNRGSYRSVLGDPEG 529

Query: 442 TIEESEKYGNLENESGQKHAASDFTK--------AFADLDEAEKVDPNVADSYYQRGQIY 493
             ++ EK   L   + + +A+  + K        A AD ++A  ++P +  ++   G ++
Sbjct: 530 AEQDWEKALKLPVRTAKDYASRGYAKSRLDRKQDAIADYNQALTINPQLTRAHTNLGGVF 589

Query: 494 CLFGQYEEALRNLDKTIALNPN 515
              G+ E+A ++ D+ + +NPN
Sbjct: 590 YEQGEIEQARQSFDQALQINPN 611



 Score = 47.0 bits (110), Expect = 0.025,   Method: Compositional matrix adjust.
 Identities = 33/123 (26%), Positives = 60/123 (48%), Gaps = 6/123 (4%)

Query: 80  AIRHCTEEIESTSSNHTKALARLLRATVYIFTSQSTKAIEDLTQLVE--DTSVDPKIKVN 137
           A+  C + +E    N + A    +R  +Y+   Q  KAI+D  + ++  DT         
Sbjct: 669 ALADCNKGLEI---NPSSAALYTVRGNIYLRLKQYEKAIQDYGRTIQINDTRKSEVRSQA 725

Query: 138 AHIKRAVVHLHAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKT 197
           A+  RA   +    D   A  DL++A ++ P+ A+ YY+RG +Y +  + ++A+ +L K 
Sbjct: 726 AYSNRASARIQ-LKDLDGALQDLNDALRIKPDAAEDYYKRGLLYSVQNKRQDAITDLKKA 784

Query: 198 IAL 200
             L
Sbjct: 785 ADL 787



 Score = 38.5 bits (88), Expect = 9.4,   Method: Compositional matrix adjust.
 Identities = 54/207 (26%), Positives = 80/207 (38%), Gaps = 39/207 (18%)

Query: 320 LGTIEVQRGRLEEAVKCFNKALPLARDEAELSHIYSLRDAAIAQMKVCERY-NIKKKVSP 378
            G    Q G  + A + F +AL L  D  E            A +K+ E Y  I K    
Sbjct: 347 WGQQAAQSGNWQSATENFEQALELKADYTE------------AALKLGETYAEIGKYPEA 394

Query: 379 RSQ--NITKNEKLAIKQLRENNDIIIRPADKGGKTVVMDKADYTQKMTSILNSNDYEIIP 436
            +Q   + K +       RE  +I  R A  G +  +   +DY + +T            
Sbjct: 395 IAQFDTLLKQQPKTAAAFRERGEI--RFATGGYQAAI---SDYNEALTL----------- 438

Query: 437 GDPTKTIEESEKYGNLENESGQKHAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLF 496
            DP K  E     G+ + E G+  AA       AD  +A ++ PN A  Y   G ++ + 
Sbjct: 439 -DP-KDAETYNHRGDAQVELGKYEAA------IADYRKAIRLQPNQAQGYLNLGSVFFVQ 490

Query: 497 GQYEEALRNLDKTIALNPNFHVARAQR 523
           G+ E A++ LDK I    N   A   R
Sbjct: 491 GKLEAAVKELDKAIQAESNHLSAHVNR 517


>gi|282900764|ref|ZP_06308705.1| hypothetical protein CRC_02125 [Cylindrospermopsis raciborskii
           CS-505]
 gi|281194348|gb|EFA69304.1| hypothetical protein CRC_02125 [Cylindrospermopsis raciborskii
           CS-505]
          Length = 1024

 Score = 84.3 bits (207), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 98/417 (23%), Positives = 178/417 (42%), Gaps = 55/417 (13%)

Query: 117 AIEDLTQLVEDTSVDPKIKVNAHIKRAVVHLHAASDFTKAFADLDEAEKVDPNVADSYYQ 176
           AI D  Q ++    D     N  I R+ +      D   A  D ++A +++PN AD+Y  
Sbjct: 347 AIVDYNQAIQINPNDADAYNNRGIARSEL-----GDKQGAIVDYNQAIQINPNNADAYNN 401

Query: 177 RGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQRHFVVHKMIVPGDRERVEQSLKEFRN 236
           RG      G  + A+ + ++ I +NPN+  A   R     ++   GD++    ++ ++  
Sbjct: 402 RGIARSELGDKQGAIVDYNQAIQINPNYAYAYNNRGLARSEL---GDKQ---GAIVDYNQ 455

Query: 237 FVDTHSNVVEACTLFAQVLVDQE--DFDGAEEYFNRSIRVDPENASLYVHRAMLMLQARG 294
            +  + N   A   + + L   E  D  GA   +N++I+++P  A  Y+ R     +  G
Sbjct: 456 AIQINPN--NAYAYYNRGLARSELGDKQGAIVDYNQAIQINPNYADAYIGRGNARSEL-G 512

Query: 295 NVDEAIKLIEKAISIDKSCMFAYETLGTIEVQRGRLEEAVKCFNKALPLARDEAELSHIY 354
           +   AI    +AI I+ +   AY   G    + G  + A+  +N+A+ +  ++A+  +  
Sbjct: 513 DKQGAIVDYNQAIQINPNYADAYIGRGNARSELGDKQGAIVDYNQAIQINPNDADAYYNR 572

Query: 355 SLRDAAIA--QMKVCERYNIKKKVSPRSQNITKNEKLAIKQLRENNDIIIRPADKGGKTV 412
            L  + +   Q  + + YN   +++P + +   N  +A  +L           DK G  V
Sbjct: 573 GLARSELGDKQGAIVD-YNQAIQINPNNADAYNNRGIARSEL----------GDKQGAIV 621

Query: 413 VMDKADYTQKMTSILNSNDYEIIPGDPTKTIEESEKYGNLENESGQKHAA-SDFTKAFAD 471
                DY Q +         +I P       +     G   +E G K  A  D+T+A   
Sbjct: 622 -----DYNQAI---------QINP----NYADSYYNRGIARSELGDKQGAIVDYTQAI-- 661

Query: 472 LDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQRHFVWT 528
                +++PN ADSYY RG      G  + A+ + ++ I +NPN+  A   R    +
Sbjct: 662 -----QINPNYADSYYNRGIARSELGDKQGAIVDYNQAIQINPNYAYAYNNRGLARS 713



 Score = 83.2 bits (204), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 107/473 (22%), Positives = 192/473 (40%), Gaps = 56/473 (11%)

Query: 65  LSKAKRAFEHEDYLTAIRHCTEEIESTSSNHTKALARLLRATVYIFTSQSTKAIEDLTQL 124
            ++A + +E  D   AI   T+ I+    N   ALA + R            AI D  Q 
Sbjct: 230 FNRAYKLYESGDKQGAIVDYTQAIQI---NPNYALAYIGRGNARSDLGDKQGAIVDYNQA 286

Query: 125 VEDTSVDPKIKVNAHIKRAVVHLHAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLF 184
           ++   ++P   + A+  R         D   A  D ++A +++PN AD+YY RG      
Sbjct: 287 IQ---INPNYAL-AYYNRGNARSELG-DKQGAIVDYNQAIQINPNYADAYYNRGIARSEL 341

Query: 185 GQYEEALRNLDKTIALNPNFHVARAQRHFVVHKMIVPGDRERVEQSLKEFRNFVDTHSNV 244
           G  + A+ + ++ I +NPN   A   R     ++   GD+   + ++ ++   +  + N 
Sbjct: 342 GDKQGAIVDYNQAIQINPNDADAYNNRGIARSEL---GDK---QGAIVDYNQAIQINPNN 395

Query: 245 VEACTLFAQVLVDQEDFDGAEEYFNRSIRVDPENASLYVHRAMLMLQARGNVDEAIKLIE 304
            +A         +  D  GA   +N++I+++P  A  Y +R +   +  G+   AI    
Sbjct: 396 ADAYNNRGIARSELGDKQGAIVDYNQAIQINPNYAYAYNNRGLARSEL-GDKQGAIVDYN 454

Query: 305 KAISIDKSCMFAYETLGTIEVQRGRLEEAVKCFNKALPLARDEAELSHIYSLRDAAIAQM 364
           +AI I+ +  +AY   G    + G  + A+  +N+A+ +  + A+    Y  R  A +++
Sbjct: 455 QAIQINPNNAYAYYNRGLARSELGDKQGAIVDYNQAIQINPNYADA---YIGRGNARSEL 511

Query: 365 ----KVCERYNIKKKVSPRSQNITKNEKLAIKQLRENNDIIIRPADKGGKTVVMDKADYT 420
                    YN   +++P   +       A  +L           DK G  V     DY 
Sbjct: 512 GDKQGAIVDYNQAIQINPNYADAYIGRGNARSEL----------GDKQGAIV-----DYN 556

Query: 421 QKMTSILNSNDYEIIPGDPTKTIEESEKYGNL-----------------ENESGQKHAAS 463
           Q +   +N ND +          E  +K G +                  N    +    
Sbjct: 557 QAIQ--INPNDADAYYNRGLARSELGDKQGAIVDYNQAIQINPNNADAYNNRGIARSELG 614

Query: 464 DFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNF 516
           D   A  D ++A +++PN ADSYY RG      G  + A+ +  + I +NPN+
Sbjct: 615 DKQGAIVDYNQAIQINPNYADSYYNRGIARSELGDKQGAIVDYTQAIQINPNY 667



 Score = 77.8 bits (190), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 96/423 (22%), Positives = 177/423 (41%), Gaps = 57/423 (13%)

Query: 117 AIEDLTQLVEDTSVDPKIKVNAHIKRAVVHLHAASDFTKAFADLDEAEKVDPNVADSYYQ 176
           AI D  Q ++   ++P    +A+I R         D   A  D ++A +++PN AD+YY 
Sbjct: 517 AIVDYNQAIQ---INPNY-ADAYIGRGNARSELG-DKQGAIVDYNQAIQINPNDADAYYN 571

Query: 177 RGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQRHFVVHKMIVPGDRERV----EQSLK 232
           RG      G  + A+ + ++ I +NPN   A   R     ++   GD++       Q+++
Sbjct: 572 RGLARSELGDKQGAIVDYNQAIQINPNNADAYNNRGIARSEL---GDKQGAIVDYNQAIQ 628

Query: 233 EFRNFVDTHSNVVEACTLFAQVLVDQEDFDGAEEYFNRSIRVDPENASLYVHRAMLMLQA 292
              N+ D++ N   A +          D  GA   + ++I+++P  A  Y +R +   + 
Sbjct: 629 INPNYADSYYNRGIARSELG-------DKQGAIVDYTQAIQINPNYADSYYNRGIARSEL 681

Query: 293 RGNVDEAIKLIEKAISIDKSCMFAYETLGTIEVQRGRLEEAVKCFNKALPLARDEAELSH 352
            G+   AI    +AI I+ +  +AY   G    + G  + A+  +N+A+ +  + A   +
Sbjct: 682 -GDKQGAIVDYNQAIQINPNYAYAYNNRGLARSELGDKQGAIVDYNQAIQINPNNAYAYN 740

Query: 353 IYSLRDAAIA--QMKVCERYNIKKKVSPRSQNITKNEKLAIKQLRENNDIIIRPADKGGK 410
              +  + +   Q  + + Y    +++P   +   N  +A  +L           DK G 
Sbjct: 741 NRGIARSELGDKQGAIVD-YTQAIQINPNYADSYYNRGIARSEL----------GDKQGA 789

Query: 411 TVVMDKADYTQKMTSILNSNDYEIIPGDPTKTIEESEKYGNL-----------------E 453
            V     DY Q +   +N ND +          E  +K G +                  
Sbjct: 790 IV-----DYNQAIQ--INPNDADAYYNRGLARSELGDKQGAIVDYNQAIQINPNNADSYY 842

Query: 454 NESGQKHAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALN 513
           N    +    D   A  D ++A +++PN ADSYY RG      G  + A+ + ++ I +N
Sbjct: 843 NRGIARSELGDKQGAIVDYNQAIQINPNYADSYYNRGIARSELGDKQGAIVDYNQAIQIN 902

Query: 514 PNF 516
           PN+
Sbjct: 903 PNY 905



 Score = 75.5 bits (184), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 93/405 (22%), Positives = 172/405 (42%), Gaps = 57/405 (14%)

Query: 117 AIEDLTQLVEDTSVDPKIKVNAHIKRAVVHLHAASDFTKAFADLDEAEKVDPNVADSYYQ 176
           AI D  Q ++   ++P    +++  R +       D   A  D  +A +++PN ADSYY 
Sbjct: 619 AIVDYNQAIQ---INPNY-ADSYYNRGIARSELG-DKQGAIVDYTQAIQINPNYADSYYN 673

Query: 177 RGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQRHFVVHKMIVPGDRERVEQSLKEFRN 236
           RG      G  + A+ + ++ I +NPN+  A   R     ++   GD+   + ++ ++  
Sbjct: 674 RGIARSELGDKQGAIVDYNQAIQINPNYAYAYNNRGLARSEL---GDK---QGAIVDYNQ 727

Query: 237 FVDTHSNVVEACTLFAQVLVDQEDFDGAEEYFNRSIRVDPENASLYVHRAMLMLQARGNV 296
            +  + N   A         +  D  GA   + ++I+++P  A  Y +R +   +  G+ 
Sbjct: 728 AIQINPNNAYAYNNRGIARSELGDKQGAIVDYTQAIQINPNYADSYYNRGIARSEL-GDK 786

Query: 297 DEAIKLIEKAISIDKSCMFAYETLGTIEVQRGRLEEAVKCFNKALPLARDEAELSHIYSL 356
             AI    +AI I+ +   AY   G    + G  + A+  +N+A+ +  + A+     S 
Sbjct: 787 QGAIVDYNQAIQINPNDADAYYNRGLARSELGDKQGAIVDYNQAIQINPNNAD-----SY 841

Query: 357 RDAAIAQMKVCER------YNIKKKVSPRSQNITKNEKLAIKQLRENNDIIIRPADKGGK 410
            +  IA+ ++ ++      YN   +++P   +   N  +A  +L           DK G 
Sbjct: 842 YNRGIARSELGDKQGAIVDYNQAIQINPNYADSYYNRGIARSEL----------GDKQGA 891

Query: 411 TVVMDKADYTQKMTSILNSNDYEIIPGDPTKTIEESEKYGNLENESGQKHAASDFTKAFA 470
            V     DY Q +         +I P      I      GN  +E G K        A  
Sbjct: 892 IV-----DYNQAI---------QINPNYADAYIGR----GNARSELGDKQG------AIV 927

Query: 471 DLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPN 515
           D ++A +++PN AD+Y  RG      G  + A+ + ++ I +NPN
Sbjct: 928 DYNQAIQINPNYADAYNNRGIARSELGDKQGAIVDYNQAIQINPN 972



 Score = 49.7 bits (117), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 69/301 (22%), Positives = 123/301 (40%), Gaps = 48/301 (15%)

Query: 240 THSNVVEACTLFAQVLVDQEDFDGAEEYFNRSIRVDPENASLYVHRAMLMLQAR---GNV 296
            +SN  E     A  L +  D  GA   + ++I+++P  A  Y+ R      AR   G+ 
Sbjct: 221 VYSNNAEFYFNRAYKLYESGDKQGAIVDYTQAIQINPNYALAYIGRG----NARSDLGDK 276

Query: 297 DEAIKLIEKAISIDKSCMFAYETLGTIEVQRGRLEEAVKCFNKALPLARDEAELSHIYSL 356
             AI    +AI I+ +   AY   G    + G  + A+  +N+A+ +  + A+  +    
Sbjct: 277 QGAIVDYNQAIQINPNYALAYYNRGNARSELGDKQGAIVDYNQAIQINPNYADAYY---- 332

Query: 357 RDAAIAQMKVCER------YNIKKKVSPRSQNITKNEKLAIKQLRENNDIIIRPADKGGK 410
            +  IA+ ++ ++      YN   +++P   +   N  +A  +L           DK G 
Sbjct: 333 -NRGIARSELGDKQGAIVDYNQAIQINPNDADAYNNRGIARSEL----------GDKQGA 381

Query: 411 TVVMDKADYTQKMTSILNSNDYEIIPG--------------DPTKTIEESEKYGNLENES 456
            V     DY Q +    N+ D     G              D  + I+ +  Y    N  
Sbjct: 382 IV-----DYNQAIQINPNNADAYNNRGIARSELGDKQGAIVDYNQAIQINPNYAYAYNNR 436

Query: 457 G-QKHAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPN 515
           G  +    D   A  D ++A +++PN A +YY RG      G  + A+ + ++ I +NPN
Sbjct: 437 GLARSELGDKQGAIVDYNQAIQINPNNAYAYYNRGLARSELGDKQGAIVDYNQAIQINPN 496

Query: 516 F 516
           +
Sbjct: 497 Y 497


>gi|124024560|ref|YP_001018867.1| hypothetical protein P9303_28721 [Prochlorococcus marinus str. MIT
           9303]
 gi|123964846|gb|ABM79602.1| Hypothetical protein P9303_28721 [Prochlorococcus marinus str. MIT
           9303]
          Length = 706

 Score = 84.0 bits (206), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 89/375 (23%), Positives = 162/375 (43%), Gaps = 56/375 (14%)

Query: 149 AASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVAR 208
           A +D+  A +DL++A +++P  A +Y  RG        Y+ A+ + +K I +NP      
Sbjct: 328 ALNDYQGAISDLNKALEINPQYAPAYENRGNAKKKLKDYQGAITDYNKAIEINP------ 381

Query: 209 AQRHFVVHKMIVPGDRERVEQSLKEFRNFVDTHSNVVEACTLFAQVLVDQEDFDGAEEYF 268
                               Q    F N  +T   +              +D+ GA   +
Sbjct: 382 --------------------QHTGPFNNRGNTKKQL--------------KDYQGAIADY 407

Query: 269 NRSIRVDPENASLYVHRAMLMLQARGNVDEAIKLIEKAISIDKSCMFAYETLGTIEVQRG 328
           N++I +DP++A  Y +R  L  +  G+   AI    KAI+I+     A+   G  +   G
Sbjct: 408 NKAIELDPQHAYGYYNRG-LAKKNLGDYQGAIADYNKAITINPQHADAFNNRGNAKDGLG 466

Query: 329 RLEEAVKCFNKALPLARDEAELSHIYSLRDAAIAQMK----VCERYNIKKKVSPRSQNIT 384
             + A+  +NKA+ L   + + +  Y+ R ++ + +K        YN   +++P+  +  
Sbjct: 467 DTQGAISDYNKAIEL---DPQHTLAYNNRGSSKSDLKDYQGAIPDYNKAIEINPQYADAF 523

Query: 385 KNEKLAIKQLRENNDIIIRPADKGGKTVVMDKAD---YTQKMTSILNSNDYEIIPGDPTK 441
            N  +A     ++   I   AD   K + +D      +  +  +  N  D++    D  K
Sbjct: 524 NNRGIAKDNSGDHQGAI---ADYN-KAIELDPQHAFAFNNRGIAKDNLGDHQGAIADYNK 579

Query: 442 TIEESEKYGNLENESG-QKHAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYE 500
            IE   KY +  N  G  K    D+  A AD ++A  ++P  A +Y  RG    L G ++
Sbjct: 580 AIEIDPKYASAYNNRGYAKSDLKDYQGAIADFNKAIAINPQYALAYTNRGWFKYLQGDFQ 639

Query: 501 EALRNLDKTIALNPN 515
           +AL++ +K +A+ PN
Sbjct: 640 DALKDANKALAITPN 654



 Score = 53.9 bits (128), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 62/277 (22%), Positives = 116/277 (41%), Gaps = 20/277 (7%)

Query: 260 DFDGAEEYFNRSIRVDPENASLYVHRAMLMLQARGNVDEAIKLIEKAISIDKSCMFAYET 319
           D+ GA    N+++ ++P+ A  Y +R     + + +   AI    KAI I+      +  
Sbjct: 331 DYQGAISDLNKALEINPQYAPAYENRGNAKKKLK-DYQGAITDYNKAIEINPQHTGPFNN 389

Query: 320 LGTIEVQRGRLEEAVKCFNKALPLARDEAELSHIYSLRDAAIAQMKVCE------RYNIK 373
            G  + Q    + A+  +NKA+ L     +  H Y   +  +A+  + +       YN  
Sbjct: 390 RGNTKKQLKDYQGAIADYNKAIEL-----DPQHAYGYYNRGLAKKNLGDYQGAIADYNKA 444

Query: 374 KKVSPRSQNITKNEKLAIKQLRENNDIIIRPADKGGKTVVMDKAD---YTQKMTSILNSN 430
             ++P+  +   N   A   L +    I        K + +D      Y  + +S  +  
Sbjct: 445 ITINPQHADAFNNRGNAKDGLGDTQGAI----SDYNKAIELDPQHTLAYNNRGSSKSDLK 500

Query: 431 DYEIIPGDPTKTIEESEKYGNLENESG-QKHAASDFTKAFADLDEAEKVDPNVADSYYQR 489
           DY+    D  K IE + +Y +  N  G  K  + D   A AD ++A ++DP  A ++  R
Sbjct: 501 DYQGAIPDYNKAIEINPQYADAFNNRGIAKDNSGDHQGAIADYNKAIELDPQHAFAFNNR 560

Query: 490 GQIYCLFGQYEEALRNLDKTIALNPNFHVARAQRHFV 526
           G      G ++ A+ + +K I ++P +  A   R + 
Sbjct: 561 GIAKDNLGDHQGAIADYNKAIEIDPKYASAYNNRGYA 597



 Score = 53.1 bits (126), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 51/213 (23%), Positives = 87/213 (40%), Gaps = 7/213 (3%)

Query: 151 SDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQ 210
            D   A +D ++A ++DP    +Y  RG        Y+ A+ + +K I +NP +  A   
Sbjct: 466 GDTQGAISDYNKAIELDPQHTLAYNNRGSSKSDLKDYQGAIPDYNKAIEINPQYADAFNN 525

Query: 211 RHFVVHKMIVPGDRERVEQSLKEFRNFVDTHSNVVEACTLFAQVLVDQEDFDGAEEYFNR 270
           R          GD +       +       H+       +    L D +   GA   +N+
Sbjct: 526 RGIAKDNS---GDHQGAIADYNKAIELDPQHAFAFNNRGIAKDNLGDHQ---GAIADYNK 579

Query: 271 SIRVDPENASLYVHRAMLMLQARGNVDEAIKLIEKAISIDKSCMFAYETLGTIEVQRGRL 330
           +I +DP+ AS Y +R       + +   AI    KAI+I+     AY   G  +  +G  
Sbjct: 580 AIEIDPKYASAYNNRGYAKSDLK-DYQGAIADFNKAIAINPQYALAYTNRGWFKYLQGDF 638

Query: 331 EEAVKCFNKALPLARDEAELSHIYSLRDAAIAQ 363
           ++A+K  NKAL +  ++        L   A+ Q
Sbjct: 639 QDALKDANKALAITPNDGATLDTRGLAKHALGQ 671



 Score = 43.9 bits (102), Expect = 0.21,   Method: Compositional matrix adjust.
 Identities = 29/102 (28%), Positives = 49/102 (48%), Gaps = 5/102 (4%)

Query: 117 AIEDLTQLVEDTSVDPKIKVNAHIKRAVVHLHAASDFTKAFADLDEAEKVDPNVADSYYQ 176
           AI D  + +E   +DPK   +A+  R         D+  A AD ++A  ++P  A +Y  
Sbjct: 573 AIADYNKAIE---IDPKY-ASAYNNRGYAKSDL-KDYQGAIADFNKAIAINPQYALAYTN 627

Query: 177 RGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQRHFVVHKM 218
           RG    L G +++AL++ +K +A+ PN       R    H +
Sbjct: 628 RGWFKYLQGDFQDALKDANKALAITPNDGATLDTRGLAKHAL 669


>gi|300867655|ref|ZP_07112302.1| hypothetical protein OSCI_3440027 [Oscillatoria sp. PCC 6506]
 gi|300334366|emb|CBN57474.1| hypothetical protein OSCI_3440027 [Oscillatoria sp. PCC 6506]
          Length = 1196

 Score = 83.6 bits (205), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 87/386 (22%), Positives = 162/386 (41%), Gaps = 46/386 (11%)

Query: 155 KAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQRHFV 214
           +A A  D+A K+ P+   ++Y+RG      GQ+EEAL + DKTI + P+   A   R + 
Sbjct: 512 EAIASYDKAIKIKPDYHQAWYKRGNALGDLGQFEEALASYDKTIEIKPDHQEAWFNRGWA 571

Query: 215 VHKMIVPGDRERVEQSLKEFRNFVDTHSNVVEACTLFAQVLVDQEDFDGAEEYFNRSIRV 274
           + K+       R E+++  +   ++   +  EA       L D   F+ A   ++++I +
Sbjct: 572 LRKL------GRFEKAITSYDKAIEIKHDDHEAWFYRGYALDDLGRFEEAIASYDKAIEI 625

Query: 275 DPENASLYVHRAMLMLQARGNVDEAIKLIEKAISIDKSCMFAYETLGTIEVQRGRLEEAV 334
             ++   + +R    L   G  +EAI   +K I       +A+   G      G+ EEA+
Sbjct: 626 KHDDHEAWFYRGY-ALGELGRFEEAIASYDKVIEFKPDDYYAWNNRGWALQNLGQFEEAI 684

Query: 335 KCFNKALPLARDEAELSHIYSLRDAAIAQMKVCERYNIKKKVSPRSQNITKNEKLAIKQL 394
             ++K +    D+ E    +  R  A+        +N+ +      + I   EK+     
Sbjct: 685 ASYDKVIEFKPDKHE---AWYNRGVAL--------FNLGRN----EEAIASYEKV----- 724

Query: 395 RENNDIIIRPADKGGKTVVMDKADYTQKMTSILNSNDYEIIPGDPTKTIE-ESEKYGNLE 453
                I  +P D            +  +  ++ N   +E       K IE + +K+    
Sbjct: 725 -----IEFKPDDYYA---------WNNRGWALQNLGQFEEAIASYDKVIEFKPDKHEAWY 770

Query: 454 NESGQKHAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALN 513
           N            +A A  ++A ++ P+  ++++ RG +    G++EEAL + DK I + 
Sbjct: 771 NRGVALFNLGRNEEAIASYEKAIEIKPDFYEAWFTRGIVLFKLGRFEEALASYDKAIEIK 830

Query: 514 PNFHVARAQRHFVWTSTLAELMAFSD 539
           P+ H A   R +     L EL  F +
Sbjct: 831 PDDHEAWNNRGW----ALGELRRFKE 852



 Score = 80.9 bits (198), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 85/372 (22%), Positives = 147/372 (39%), Gaps = 50/372 (13%)

Query: 153 FTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQRH 212
           F +A A  D+  +  P+   ++  RG      GQ+EEA+ + DK I   P+ H A   R 
Sbjct: 646 FEEAIASYDKVIEFKPDDYYAWNNRGWALQNLGQFEEAIASYDKVIEFKPDKHEAWYNRG 705

Query: 213 FVVHKMIVPGDRERVEQSLKEFRNFVDTHSNVVEACTLFAQVLVDQEDFDGAEEYFNRSI 272
             +  +       R E+++  +   ++   +   A       L +   F+ A   +++ I
Sbjct: 706 VALFNL------GRNEEAIASYEKVIEFKPDDYYAWNNRGWALQNLGQFEEAIASYDKVI 759

Query: 273 RVDPENASLYVHRAMLMLQARGNVDEAIKLIEKAISIDKSCMFAYETLGTIEVQRGRLEE 332
              P+    + +R + +    G  +EAI   EKAI I      A+ T G +  + GR EE
Sbjct: 760 EFKPDKHEAWYNRGVALFNL-GRNEEAIASYEKAIEIKPDFYEAWFTRGIVLFKLGRFEE 818

Query: 333 AVKCFNKALPLARDEAELSHIYSLRDAAIAQMKVCERYNIKKKVSPRSQNITKNEKLAIK 392
           A+  ++KA+                                 ++ P       N   A+ 
Sbjct: 819 ALASYDKAI---------------------------------EIKPDDHEAWNNRGWALG 845

Query: 393 QLRENNDIIIRPADKGGKTVVMDKADY----TQKMTSILNSNDYEIIPGDPTKTIE-ESE 447
           +LR   + +    DK     +  KADY      +  ++ N   +E       K +E + +
Sbjct: 846 ELRRFKEALT-SCDKA----IEIKADYHYAWNNRGWALRNLGRFEEAIASYNKALEIKPD 900

Query: 448 KYGNLENESGQKHAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLD 507
            Y    N          F +A A LD+A ++ P+   ++  RG        YEEAL +LD
Sbjct: 901 HYEAWNNRGVALQNLGRFEEALASLDKAIEIKPDDHYTWCNRGATLIKLNCYEEALISLD 960

Query: 508 KTIALNPNFHVA 519
           K I ++PN+  A
Sbjct: 961 KAIEIDPNYTSA 972



 Score = 59.3 bits (142), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 57/253 (22%), Positives = 108/253 (42%), Gaps = 14/253 (5%)

Query: 147 LHAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHV 206
           L     F +A A  D+  +  P+  +++Y RG      G+ EEA+ + +K I + P+F+ 
Sbjct: 742 LQNLGQFEEAIASYDKVIEFKPDKHEAWYNRGVALFNLGRNEEAIASYEKAIEIKPDFYE 801

Query: 207 ARAQRHFVVHKMIVPGDRERVEQSLKEFRNFVDTHSNVVEACTLFAQVLVDQEDFDGAEE 266
           A   R  V+ K+       R E++L  +   ++   +  EA       L +   F  A  
Sbjct: 802 AWFTRGIVLFKL------GRFEEALASYDKAIEIKPDDHEAWNNRGWALGELRRFKEALT 855

Query: 267 YFNRSIRVDPENASLYVHRAMLMLQARGNVDEAIKLIEKAISIDKSCMFAYETLGTIEVQ 326
             +++I +  +    + +R    L+  G  +EAI    KA+ I      A+   G     
Sbjct: 856 SCDKAIEIKADYHYAWNNRGW-ALRNLGRFEEAIASYNKALEIKPDHYEAWNNRGVALQN 914

Query: 327 RGRLEEAVKCFNKALPLARDEAELSHIYSLRDAAIAQMKVCERYNIKK----KVSPRSQN 382
            GR EEA+   +KA+ +  D+    + +  R A + ++   E   I      ++ P   +
Sbjct: 915 LGRFEEALASLDKAIEIKPDD---HYTWCNRGATLIKLNCYEEALISLDKAIEIDPNYTS 971

Query: 383 ITKNEKLAIKQLR 395
              N+ L + +L+
Sbjct: 972 AWYNQILVLHKLK 984



 Score = 57.0 bits (136), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 46/206 (22%), Positives = 95/206 (46%), Gaps = 8/206 (3%)

Query: 138 AHIKRAVVHLHAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKT 197
           A   R +V L     F +A A  D+A ++ P+  +++  RG       +++EAL + DK 
Sbjct: 802 AWFTRGIV-LFKLGRFEEALASYDKAIEIKPDDHEAWNNRGWALGELRRFKEALTSCDKA 860

Query: 198 IALNPNFHVARAQRHFVVHKMIVPGDRERVEQSLKEFRNFVDTHSNVVEACTLFAQVLVD 257
           I +  ++H A   R + +  +       R E+++  +   ++   +  EA       L +
Sbjct: 861 IEIKADYHYAWNNRGWALRNL------GRFEEAIASYNKALEIKPDHYEAWNNRGVALQN 914

Query: 258 QEDFDGAEEYFNRSIRVDPENASLYVHRAMLMLQARGNVDEAIKLIEKAISIDKSCMFAY 317
              F+ A    +++I + P++   + +R   +++     +EA+  ++KAI ID +   A+
Sbjct: 915 LGRFEEALASLDKAIEIKPDDHYTWCNRGATLIKLNC-YEEALISLDKAIEIDPNYTSAW 973

Query: 318 ETLGTIEVQRGRLEEAVKCFNKALPL 343
                +  +  R EE+ K F K + L
Sbjct: 974 YNQILVLHKLKRYEESAKSFYKVIEL 999



 Score = 52.8 bits (125), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 43/165 (26%), Positives = 81/165 (49%), Gaps = 11/165 (6%)

Query: 145  VHLHAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNF 204
            V L     F +A A LD+A ++ P+   ++  RG        YEEAL +LDK I ++PN+
Sbjct: 910  VALQNLGRFEEALASLDKAIEIKPDDHYTWCNRGATLIKLNCYEEALISLDKAIEIDPNY 969

Query: 205  HVARAQRHFVVHKMIVPGDRERVEQSLKEFRNFVDTHSNVVEACTLFAQVLVDQEDFDGA 264
              A   +  V+HK+      +R E+S K F   ++ + N +    +   +   QE  +  
Sbjct: 970  TSAWYNQILVLHKL------KRYEESAKSFYKVIELNPNYL---WMRRWLFSTQEGIESF 1020

Query: 265  EEYFNRSI-RVDPE-NASLYVHRAMLMLQARGNVDEAIKLIEKAI 307
             EY ++++  +D    AS    ++++ L    + D++I ++  +I
Sbjct: 1021 LEYSSKNLASIDKVIEASSNFFKSIIRLLGFKSWDDSITILNNSI 1065


>gi|302371590|gb|ADL28121.1| translocase of outer mitochondrial membrane 70 [Blastocystis sp.
           NandII]
          Length = 833

 Score = 83.6 bits (205), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 82/357 (22%), Positives = 159/357 (44%), Gaps = 20/357 (5%)

Query: 22  PSKQFIKTYLKSFPNDPILQPDG-------LSNGVELTNGDTNESHELDLLSKAKRAFEH 74
           PSKQF+  Y  +  ++   + +        L+  +    GD      L +    ++A   
Sbjct: 483 PSKQFVAFYFSTIASEKAAEYNPSKFTEQYLAELIAAPQGDATVGDYLLMRGGLRKA--E 540

Query: 75  EDYLTAIRHCTEEIESTSSNHTKALARLLRATVYIFTSQSTKAIEDLTQLVEDTSVDPKI 134
           + Y  A+    E  +  S  H +A A L  AT+   +  + +A++   ++  D +   + 
Sbjct: 541 QRYEEAMADFLEAAKEESHCHAQADACLEAATLLSLSGDTIEALKYYERVYADKA---QR 597

Query: 135 KVNAHIKRAVVHLHAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNL 194
            VN  +K A   +    +  +A    DEA    P   D ++ RGQ+  +  + EEA+R+L
Sbjct: 598 SVNLLVKYASCLVEQEDERYRAI--FDEACASFPGECDGFFHRGQVMYIENKTEEAIRDL 655

Query: 195 DKTIALNPNFHVARAQRHFVVHKMIVPGDRERVEQSLKEFRNFVDTHSNVVEACTLFAQV 254
            K   LN N  +A  Q  F         ++ + +Q+++  +  V    N  +    F ++
Sbjct: 656 TKVTELNKNHAMAYVQLAFCYM------NQNQSQQAMESMKRAVACGKNRAQVFNHFGEL 709

Query: 255 LVDQEDFDGAEEYFNRSIRVDPENASLYVHRAMLMLQARGNVDEAIKLIEKAISIDKSCM 314
            +    F  A+  F ++   D + A  YV+ A   LQ   +  +A  L++KAI ID SC+
Sbjct: 710 CMALGLFSDADMNFKKAEEADKDWAYSYVNEATYYLQTTQDYLKASDLLKKAIKIDPSCI 769

Query: 315 FAYETLGTIEVQRGRLEEAVKCFNKALPLARDEAELSHIYSLRDAAIAQMKVCERYN 371
            AY  L  + +     ++A    + AL  A   ++++ +Y+ ++++  Q+K  ++Y 
Sbjct: 770 NAYLQLAQLHMLLQEWDDANSILDSALKEAVSYSDITSVYTSKESSTYQLKTLQKYQ 826



 Score = 38.9 bits (89), Expect = 6.4,   Method: Compositional matrix adjust.
 Identities = 20/56 (35%), Positives = 29/56 (51%)

Query: 472 LDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQRHFVW 527
            DEA    P   D ++ RGQ+  +  + EEA+R+L K   LN N  +A  Q  F +
Sbjct: 621 FDEACASFPGECDGFFHRGQVMYIENKTEEAIRDLTKVTELNKNHAMAYVQLAFCY 676


>gi|328954592|ref|YP_004371926.1| hypothetical protein Desac_2946 [Desulfobacca acetoxidans DSM
           11109]
 gi|328454916|gb|AEB10745.1| Tetratricopeptide TPR_2 repeat-containing protein [Desulfobacca
           acetoxidans DSM 11109]
          Length = 668

 Score = 83.6 bits (205), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 111/468 (23%), Positives = 193/468 (41%), Gaps = 55/468 (11%)

Query: 104 RATVYIFTSQSTKAIEDLTQLVEDTSVDPKIKVNAHIKRAVVHLHAASDFTKAFADLDEA 163
           R  +Y    +   AI D   ++    +DP ++  A+  R + H      + +A AD + A
Sbjct: 127 RGLIYTLLGKEELAIADFGTVLR---LDP-VRPAAYYNRGMAHSRRGR-YDQAIADYNRA 181

Query: 164 EKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQRHFVVHKMIVPG- 222
            +++P  A  Y+ RG  Y   G+ + A            +F  AR  +  V  + + P  
Sbjct: 182 LELNPGDAQVYHLRGIAYSKLGRSDLA----------KEDFQKARGLQIPVTLESVPPAL 231

Query: 223 -DRERVEQSLKEF---RNFVDTHSNVVEACTLFAQVLVDQ---EDFDGAEEYFNRSIRVD 275
            D  R  + ++E      F+   S++  +        VD    + +D A   F++ I   
Sbjct: 232 TDEARPSREVRESAPPEQFITVRSSLDRSIKPIYNQGVDHFFNKQYDLAVSEFSQVINAH 291

Query: 276 PENASLYVHRAMLMLQARGNVDEAIKLIEKAISIDKSCMFAYETLGTIEVQRGRLEEAVK 335
           P     Y +R M+    +G  + AI      + ID +   AY   G  +V+RGRLE+A+ 
Sbjct: 292 PNFPEAYFNRGMIY-ALKGQDELAIADFNAVLRIDPNRGDAYVNRGMAQVRRGRLEKALA 350

Query: 336 CFNKALPLARDEAELSHIYSLR----DAAIAQMKVCERYNIKKKVS-------PRSQNIT 384
            FN+AL     +A+   IY  R    D      +  E +   K++S       P +Q+  
Sbjct: 351 DFNRALQFNPSDAQ---IYRARGNVYDMLHKTQQAREDFQKAKELSGRVAYSPPSAQDTA 407

Query: 385 KNEKLAIKQLRENNDIIIRPADKGGKTVVMDK-----------AD-YTQKMTSILNSNDY 432
                + + +   +   + P +        DK           AD Y Q+    L     
Sbjct: 408 IPVPPSTRPVVAPSAGPVAPPESAADQAAWDKIQNALKINPKNADAYYQRGGLQLKRGKI 467

Query: 433 EIIPGDPTKTIEESEKYGNLENESGQKHAA-SDFTKAFADLDEAEKVDPNVADSYYQRGQ 491
           +    D ++++E   K+     + G   A    F +A  DL+ A  +DP+  +S   RG 
Sbjct: 468 DDAIADFSRSLELRPKFVKAYVDRGTAWAKKGQFDQALVDLNRALDLDPDSVESLNNRGG 527

Query: 492 IYCLFGQYEEALRNLDKTIALNPNFHVA---RAQRHFVWTSTLAELMA 536
           IY     Y+ AL +L++ + LNPN+  A   RAQ ++ +T  L + +A
Sbjct: 528 IYARQSMYDRALSDLNRALDLNPNYAKAYYNRAQVYY-FTGHLQQAVA 574



 Score = 75.5 bits (184), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 59/214 (27%), Positives = 103/214 (48%), Gaps = 12/214 (5%)

Query: 156 AFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQRHFVV 215
           A+  +  A K++P  AD+YYQRG +    G+ ++A+ +  +++ L P F  A   R    
Sbjct: 436 AWDKIQNALKINPKNADAYYQRGGLQLKRGKIDDAIADFSRSLELRPKFVKAYVDRGTAW 495

Query: 216 HKMIVPGDRERVEQSLKEFRNFVDTHSNVVEACTLFAQVLVDQEDFDGAEEYFNRSIRVD 275
            K      + + +Q+L +    +D   + VE+      +   Q  +D A    NR++ ++
Sbjct: 496 AK------KGQFDQALVDLNRALDLDPDSVESLNNRGGIYARQSMYDRALSDLNRALDLN 549

Query: 276 PENASLYVHRAMLMLQARGNVDEAIKLIEKAISIDKSCMFAYETLGTIEVQRGRLEEAVK 335
           P  A  Y +RA +     G++ +A+  +EKA+S+D     AY   G I  +R + + A+ 
Sbjct: 550 PNYAKAYYNRAQVYYFT-GHLQQAVADLEKAVSLDPKDADAYYNRGLIYDKRKQYDLAIA 608

Query: 336 CFNKALPLARDEAELSHIYSLRDAAIAQMKVCER 369
            FN+AL L      L+  Y   D A+A  K   R
Sbjct: 609 DFNQALAL---NPRLAQAYY--DRAVALEKTGRR 637



 Score = 55.5 bits (132), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 60/240 (25%), Positives = 102/240 (42%), Gaps = 23/240 (9%)

Query: 94  NHTKALARLLRATVYIFTSQSTKAIEDLTQLVEDTSVDPKIKVNAHIKRAVVHLHAASDF 153
           N   A A   R  + +   +   AI D ++ +E   + PK  V A++ R          F
Sbjct: 447 NPKNADAYYQRGGLQLKRGKIDDAIADFSRSLE---LRPKF-VKAYVDRGTAWAKKGQ-F 501

Query: 154 TKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVA---RAQ 210
            +A  DL+ A  +DP+  +S   RG IY     Y+ AL +L++ + LNPN+  A   RAQ
Sbjct: 502 DQALVDLNRALDLDPDSVESLNNRGGIYARQSMYDRALSDLNRALDLNPNYAKAYYNRAQ 561

Query: 211 RHFVVHKMIVPGDRERVEQSLKEFRNFVDTHSNVVEACTLFAQVLVDQEDFDGAEEYFNR 270
            ++    +         +Q++ +    V       +A      +   ++ +D A   FN+
Sbjct: 562 VYYFTGHL---------QQAVADLEKAVSLDPKDADAYYNRGLIYDKRKQYDLAIADFNQ 612

Query: 271 SIRVDPENASLYVHRAMLMLQARGNVDEAIKLIEKAISIDKSCMFAYETLGTIEVQRGRL 330
           ++ ++P  A  Y  RA + L+  G   EA+   E  +          E  G IE  + RL
Sbjct: 613 ALALNPRLAQAYYDRA-VALEKTGRRQEALDSYEAFLRCAPP-----ELSGQIEKAQNRL 666



 Score = 50.8 bits (120), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 61/273 (22%), Positives = 118/273 (43%), Gaps = 32/273 (11%)

Query: 261 FDGAEEYFNRSIRVDPENASLYVHRAMLMLQARGNVDEAIKLIEKAISIDKSCMFAYETL 320
           +D A   F+R I   P++   Y +R  L+    G  + AI      + +D     AY   
Sbjct: 103 YDLAVATFSRIIANHPDHVESYYNRG-LIYTLLGKEELAIADFGTVLRLDPVRPAAYYNR 161

Query: 321 GTIEVQRGRLEEAVKCFNKALPLARDEAELSHIYSLRDAAIAQMKVCERYNIKKKVSPRS 380
           G    +RGR ++A+  +N+AL L   +A+   +Y LR  A +++    R ++ K+   ++
Sbjct: 162 GMAHSRRGRYDQAIADYNRALELNPGDAQ---VYHLRGIAYSKLG---RSDLAKEDFQKA 215

Query: 381 QNIT------------KNEKLAIKQLRENND----IIIRPA-DKGGKTVVMDKADYTQKM 423
           + +              +E    +++RE+      I +R + D+  K +      Y Q +
Sbjct: 216 RGLQIPVTLESVPPALTDEARPSREVRESAPPEQFITVRSSLDRSIKPI------YNQGV 269

Query: 424 TSILNSNDYEIIPGDPTKTIEESEKYGNLENESGQKHAASDFTK-AFADLDEAEKVDPNV 482
               N   Y++   + ++ I     +       G  +A     + A AD +   ++DPN 
Sbjct: 270 DHFFNKQ-YDLAVSEFSQVINAHPNFPEAYFNRGMIYALKGQDELAIADFNAVLRIDPNR 328

Query: 483 ADSYYQRGQIYCLFGQYEEALRNLDKTIALNPN 515
            D+Y  RG      G+ E+AL + ++ +  NP+
Sbjct: 329 GDAYVNRGMAQVRRGRLEKALADFNRALQFNPS 361



 Score = 46.2 bits (108), Expect = 0.047,   Method: Compositional matrix adjust.
 Identities = 25/66 (37%), Positives = 36/66 (54%)

Query: 465 FTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQRH 524
             +A ADL++A  +DP  AD+YY RG IY    QY+ A+ + ++ +ALNP    A   R 
Sbjct: 569 LQQAVADLEKAVSLDPKDADAYYNRGLIYDKRKQYDLAIADFNQALALNPRLAQAYYDRA 628

Query: 525 FVWTST 530
                T
Sbjct: 629 VALEKT 634


>gi|124024536|ref|YP_001018843.1| hypothetical protein P9303_28481 [Prochlorococcus marinus str. MIT
           9303]
 gi|123964822|gb|ABM79578.1| Hypothetical protein P9303_28481 [Prochlorococcus marinus str. MIT
           9303]
          Length = 462

 Score = 83.6 bits (205), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 61/255 (23%), Positives = 118/255 (46%), Gaps = 34/255 (13%)

Query: 117 AIEDLTQLVEDTSVDPKIKVNAHIKRAVVHLHAASDFTKAFADLDEAEKVDPNVADSYYQ 176
           AI D  + +E   ++P+   +A+  R       + D   A AD +++ +++P  AD+YY 
Sbjct: 98  AIADYNKAIE---INPQY-ADAYYNRGNAK-RKSGDCQGAIADYNKSIEINPQYADAYYN 152

Query: 177 RGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQRHFVVHKM------------------ 218
           RG      G Y+ A+ + +K+I +NP +  A   R    +K+                  
Sbjct: 153 RGNAKRKSGDYQGAIADYNKSIEVNPQYADAYNNRGRAKYKLKDTQGAIDDFNKAIEINP 212

Query: 219 ---IVPGDRERVEQSLKEFRNFVDTHSNVVEACTLFAQVLVDQ-------EDFDGAEEYF 268
              I   +R   +  LK+++  +   +  +E     A    ++       +D+ GA   F
Sbjct: 213 QLAIAYSNRGNAKDELKDYQGAISDFNKAIEIIPQDAAAYYNRGNAKDELKDYQGAISDF 272

Query: 269 NRSIRVDPENASLYVHRAMLMLQARGNVDEAIKLIEKAISIDKSCMFAYETLGTIEVQRG 328
           N++I ++P+ A+ Y +R ++  ++ G+  EAI    KAI I+     AY   G ++ + G
Sbjct: 273 NKAIEINPQYAAAYYNRGIVKRES-GDTQEAIADFNKAIEINPQLAIAYSNRGIVKRESG 331

Query: 329 RLEEAVKCFNKALPL 343
             +EA+  FN+A+ +
Sbjct: 332 DTQEAIADFNRAIEI 346



 Score = 79.3 bits (194), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 95/414 (22%), Positives = 174/414 (42%), Gaps = 21/414 (5%)

Query: 118 IEDLTQLVEDTSVDPKIKVNAHIKRAVVHLHAASDFTKAFADLDEAEKVDPNVADSYYQR 177
           I +LT+L+E    +P++   A+  R +   +   D+  A  D  +A  ++P    +Y  R
Sbjct: 31  IAELTKLIE---TNPQVAA-AYYNRGIAK-YDLKDYQGAIVDWAKAIDINPQYVAAYNNR 85

Query: 178 GQIYCLFGQYEEALRNLDKTIALNPNFHVARAQRHFVVHKMIVPGDRERVEQSLKEFRNF 237
           G      G Y+ A+ + +K I +NP +  A   R     K    GD    + ++ ++   
Sbjct: 86  GLAKRKSGDYQGAIADYNKAIEINPQYADAYYNRGNAKRKS---GD---CQGAIADYNKS 139

Query: 238 VDTHSNVVEACTLFAQVLVDQEDFDGAEEYFNRSIRVDPENASLYVHRAMLMLQARGNVD 297
           ++ +    +A            D+ GA   +N+SI V+P+ A  Y +R     + + +  
Sbjct: 140 IEINPQYADAYYNRGNAKRKSGDYQGAIADYNKSIEVNPQYADAYNNRGRAKYKLK-DTQ 198

Query: 298 EAIKLIEKAISIDKSCMFAYETLGTIEVQRGRLEEAVKCFNKALPL-ARDEAELSHIYSL 356
            AI    KAI I+     AY   G  + +    + A+  FNKA+ +  +D A   +  + 
Sbjct: 199 GAIDDFNKAIEINPQLAIAYSNRGNAKDELKDYQGAISDFNKAIEIIPQDAAAYYNRGNA 258

Query: 357 RDAAIAQMKVCERYNIKKKVSPRSQNITKNEKLAIKQLRENNDIIIRPADKGGKTVVMDK 416
           +D           +N   +++P+      N  +     RE+ D     AD   K + ++ 
Sbjct: 259 KDELKDYQGAISDFNKAIEINPQYAAAYYNRGIV---KRESGDTQEAIADFN-KAIEINP 314

Query: 417 A---DYTQKMTSILNSNDYEIIPGDPTKTIEESEKYGNLENESG-QKHAASDFTKAFADL 472
                Y+ +      S D +    D  + IE + +Y    N  G  K    ++ +A AD 
Sbjct: 315 QLAIAYSNRGIVKRESGDTQEAIADFNRAIEINPEYAAAYNNRGIAKKNLGNYQEAIADY 374

Query: 473 DEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQRHFV 526
           ++A +++P  A +YY RG         + A+  L+K I +NP +  A   R  V
Sbjct: 375 NKAIEINPQYAAAYYNRGIAKYKLKDTQGAIAELNKAIEINPQYAAAYKTRGIV 428



 Score = 76.3 bits (186), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 99/425 (23%), Positives = 177/425 (41%), Gaps = 69/425 (16%)

Query: 117 AIEDLTQLVEDTSVDPKIKVNAHIKRAVVHLHAASDFTKAFADLDEAEKVDPNVADSYYQ 176
           AI D  + ++   ++P+  V A+  R +     + D+  A AD ++A +++P  AD+YY 
Sbjct: 64  AIVDWAKAID---INPQY-VAAYNNRGLAK-RKSGDYQGAIADYNKAIEINPQYADAYYN 118

Query: 177 RGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQRHFVVHKM---------------IVP 221
           RG      G  + A+ + +K+I +NP +  A   R     K                + P
Sbjct: 119 RGNAKRKSGDCQGAIADYNKSIEINPQYADAYYNRGNAKRKSGDYQGAIADYNKSIEVNP 178

Query: 222 ------GDRERVEQSLKEFRNFVDTHSNVVEACTLFAQVLVDQ-------EDFDGAEEYF 268
                  +R R +  LK+ +  +D  +  +E     A    ++       +D+ GA   F
Sbjct: 179 QYADAYNNRGRAKYKLKDTQGAIDDFNKAIEINPQLAIAYSNRGNAKDELKDYQGAISDF 238

Query: 269 NRSIRVDPENASLYVHRAMLMLQARGNVDEAIKLIEKAISIDKSCMFAYETLGTIEVQRG 328
           N++I + P++A+ Y +R     + + +   AI    KAI I+     AY   G ++ + G
Sbjct: 239 NKAIEIIPQDAAAYYNRGNAKDELK-DYQGAISDFNKAIEINPQYAAAYYNRGIVKRESG 297

Query: 329 RLEEAVKCFNKALPLARDEAELSHIYSLRDAAIAQMKVCERYNIKKKVSPRSQNITKNEK 388
             +EA+  FNKA+ +     +L+  YS R              I K+ S  +Q    +  
Sbjct: 298 DTQEAIADFNKAIEI---NPQLAIAYSNR-------------GIVKRESGDTQEAIADFN 341

Query: 389 LAIKQLRENNDIIIRPADKGGKTVVMDKADYTQKMTSILNSNDYEIIPGDPTKTIEESEK 448
            AI+         I P            A Y  +  +  N  +Y+    D  K IE + +
Sbjct: 342 RAIE---------INP---------EYAAAYNNRGIAKKNLGNYQEAIADYNKAIEINPQ 383

Query: 449 YGNLENESG-QKHAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLD 507
           Y       G  K+   D   A A+L++A +++P  A +Y  RG +  L G  + A  +  
Sbjct: 384 YAAAYYNRGIAKYKLKDTQGAIAELNKAIEINPQYAAAYKTRGIVKELVGDLKGACADWK 443

Query: 508 KTIAL 512
           +  +L
Sbjct: 444 EASSL 448



 Score = 66.6 bits (161), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 47/197 (23%), Positives = 97/197 (49%), Gaps = 7/197 (3%)

Query: 152 DFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQR 211
           D+  A +D ++A +++P  A +YY RG +    G  +EA+ + +K I +NP   +A + R
Sbjct: 264 DYQGAISDFNKAIEINPQYAAAYYNRGIVKRESGDTQEAIADFNKAIEINPQLAIAYSNR 323

Query: 212 HFVVHKMIVPGDRERVEQSLKEFRNFVDTHSNVVEACTLFAQVLVDQEDFDGAEEYFNRS 271
             V  +    GD    ++++ +F   ++ +     A         +  ++  A   +N++
Sbjct: 324 GIVKRE---SGD---TQEAIADFNRAIEINPEYAAAYNNRGIAKKNLGNYQEAIADYNKA 377

Query: 272 IRVDPENASLYVHRAMLMLQARGNVDEAIKLIEKAISIDKSCMFAYETLGTIEVQRGRLE 331
           I ++P+ A+ Y +R +   + + +   AI  + KAI I+     AY+T G ++   G L+
Sbjct: 378 IEINPQYAAAYYNRGIAKYKLK-DTQGAIAELNKAIEINPQYAAAYKTRGIVKELVGDLK 436

Query: 332 EAVKCFNKALPLARDEA 348
            A   + +A  L + +A
Sbjct: 437 GACADWKEASSLGQKDA 453



 Score = 66.2 bits (160), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 71/309 (22%), Positives = 138/309 (44%), Gaps = 18/309 (5%)

Query: 227 VEQSLKEFRNFVDTHSNVVEACTLFAQVLVDQEDFDGAEEYFNRSIRVDPENASLYVHRA 286
           V+ ++ E    ++T+  V  A         D +D+ GA   + ++I ++P+  + Y +R 
Sbjct: 27  VQTTIAELTKLIETNPQVAAAYYNRGIAKYDLKDYQGAIVDWAKAIDINPQYVAAYNNRG 86

Query: 287 MLMLQARGNVDEAIKLIEKAISIDKSCMFAYETLGTIEVQRGRLEEAVKCFNKALPLARD 346
           +   ++ G+   AI    KAI I+     AY   G  + + G  + A+  +NK++ +   
Sbjct: 87  LAKRKS-GDYQGAIADYNKAIEINPQYADAYYNRGNAKRKSGDCQGAIADYNKSIEINPQ 145

Query: 347 EAE--LSHIYSLRDAAIAQMKVCERYNIKKKVSPRSQNITKNEKLAIKQLRENNDIIIRP 404
            A+   +   + R +   Q  + + YN   +V+P+  +   N   A  +L++    I   
Sbjct: 146 YADAYYNRGNAKRKSGDYQGAIAD-YNKSIEVNPQYADAYNNRGRAKYKLKDTQGAI--- 201

Query: 405 ADKGGKTVVMDKA---DYTQKMTSILNSNDYEIIPGDPTKTIE----ESEKYGNLENESG 457
            D   K + ++      Y+ +  +     DY+    D  K IE    ++  Y N  N   
Sbjct: 202 -DDFNKAIEINPQLAIAYSNRGNAKDELKDYQGAISDFNKAIEIIPQDAAAYYNRGNA-- 258

Query: 458 QKHAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFH 517
            K    D+  A +D ++A +++P  A +YY RG +    G  +EA+ + +K I +NP   
Sbjct: 259 -KDELKDYQGAISDFNKAIEINPQYAAAYYNRGIVKRESGDTQEAIADFNKAIEINPQLA 317

Query: 518 VARAQRHFV 526
           +A + R  V
Sbjct: 318 IAYSNRGIV 326


>gi|427715955|ref|YP_007063949.1| hypothetical protein Cal7507_0626 [Calothrix sp. PCC 7507]
 gi|427348391|gb|AFY31115.1| Tetratricopeptide TPR_1 repeat-containing protein [Calothrix sp.
           PCC 7507]
          Length = 1174

 Score = 83.6 bits (205), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 93/431 (21%), Positives = 184/431 (42%), Gaps = 26/431 (6%)

Query: 115 TKAIEDLTQLVEDTSVDPKIKVNAHIKRAVVHLHAASDFTKAFADLDEAEKVDPNVADSY 174
           T  I ++ Q +E+    P    +  +K+ ++      DF  A +  D+A ++ P   +++
Sbjct: 184 TYQINNIAQEIENI---PTTWFDLGVKQTMI-----GDFEGAISSYDKALEIKPGYYEAW 235

Query: 175 YQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQRHFVVHKMIVPGDRERVEQSLKEF 234
           Y RG       + EEA+ + DK +A+ P+++ A  ++   +  +      +R E ++  F
Sbjct: 236 YLRGYALSNLKRNEEAIASFDKVLAIQPDYYAAWNRKGAALDHL------KRYEDAIASF 289

Query: 235 RNFVDTHSNVVEACTLFAQVLVDQEDFDGAEEYFNRSIRVDPENASLYVHRAMLMLQARG 294
              +    +  EA      +L    +++ A   ++++ ++D    S +  R +  L + G
Sbjct: 290 DQAIKIDPDNHEAWHNKGNMLDKLGEYEKALISYDKAQQLDSSCYSGWNARGV-TLTSLG 348

Query: 295 NVDEAIKLIEKAISIDKSCMFAYETLGTIEVQRGRLEEAVKCFNKALPLARDEAELSHIY 354
             +EAI   +KA++I  +   A+   G   V  GR EEA+   NKAL +   E      +
Sbjct: 349 RDEEAILSCDKALAIQPNDHLAWFNRGNALVNLGRYEEALTSSNKALEI---EPNFHQAW 405

Query: 355 SLRDAAIAQMKVCER----YNIKKKVSPRSQNITKNEKLAIKQLRENNDIIIRPADKGGK 410
             R  A+  +   E     Y+   ++ P    +  N  +A+  L    + I+  + K  +
Sbjct: 406 DNRGTALRNLGCYEEAILSYDKALEIQPDYHQVWDNRGIALGNLGRYEEAILS-SSKALE 464

Query: 411 TVVMDKADYTQKMTSILNSNDYEIIPGDPTKTIEESEKYGNLENESGQKHA-ASDFTKAF 469
                   +  +  ++ N   +E       K IE    +    N  G        + +A 
Sbjct: 465 IQPDFHYAWNNRGFALGNLGCHEEAILSYDKAIEIQPNFHLAWNNRGNTLLNLGRYEEAI 524

Query: 470 ADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQRHFVWTS 529
              D+A ++ P+   + Y RG      G+YEEA+ + DK +A+ P+   A   R     +
Sbjct: 525 LSCDKALEIQPDFHPALYNRGIALLNLGRYEEAILSYDKALAIQPDIQQAWNNRGIAARN 584

Query: 530 TL--AELMAFS 538
           ++   +L+AFS
Sbjct: 585 SINFNQLLAFS 595


>gi|19705092|ref|NP_602587.1| hypothetical protein [Fusobacterium nucleatum subsp. nucleatum ATCC
           25586]
 gi|19713016|gb|AAL93886.1| Tetratricopeptide repeat family protein [Fusobacterium nucleatum
           subsp. nucleatum ATCC 25586]
          Length = 628

 Score = 83.6 bits (205), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 89/380 (23%), Positives = 162/380 (42%), Gaps = 62/380 (16%)

Query: 167 DPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPN---FHVARAQRHFVVHKMIVPGD 223
           +PN    Y  RG  Y L  +YEEA+ + ++ I LN N   ++  RA  ++  +K      
Sbjct: 23  EPNNDIYYNNRGLSYFLLKKYEEAINDYNRAIELNLNNASYYYNRACSYYCSNKY----- 77

Query: 224 RERVEQSLKEFRNFVDTHSNVVEACTLF--AQVLVDQEDFDGAEEYFNRSIRVDPENASL 281
               +++++++   +  + N  +AC              +  A E ++++I++DP NAS 
Sbjct: 78  ----DKAIEDYDKAIKLNPN--DACYFNNRGHSYFALNKYSEAIEDYDKAIKLDPNNASY 131

Query: 282 YVHRAMLMLQARGNVDEAIKLIEKAISIDKSCMFAYETLGTIEVQRGRLEEAVKCFNKAL 341
           Y  R      A    D+AI+   KAI +D +    + + G I        ++++ +NKA+
Sbjct: 132 YYKRG-FSYYALNKYDKAIEDYNKAIKLDPNNAAYFSSRGDIYYYEKAYNKSIEDYNKAI 190

Query: 342 PLARDEAELSHIYSLRDAAIAQMK----VCERYNIKKKVSPRSQNITKNEKLAIKQLREN 397
            L  + A     Y  R  A  ++K        YN   K++P +     N      +L++ 
Sbjct: 191 KLDPNNA---FYYDNRGLAYEKLKKYKEAINDYNKAIKLNPNNAFYCYNRGFTYNKLKKY 247

Query: 398 NDIIIRPADKGGKTVVMDKADYTQKMTSILNSNDYEIIPGDPTKTIEESEKYGNLENESG 457
            + I    +   K + +D                    P + +        Y NL     
Sbjct: 248 KEAI----NDYDKAIKLD--------------------PNNASYFNNRGVAYNNL----- 278

Query: 458 QKHAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFH 517
                 +++KA  D D+A K++PN   +Y  +G  +   G++EEA+ N +K I L+P++ 
Sbjct: 279 -----GEYSKALEDYDKAIKLNPNYTFAYNNKGITFDNLGEFEEAIMNYNKAIELDPSYK 333

Query: 518 VARAQRHFVWTSTLAELMAF 537
            A   R+F    +L EL  F
Sbjct: 334 SAIENRNF----SLKELENF 349



 Score = 76.6 bits (187), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 63/268 (23%), Positives = 121/268 (45%), Gaps = 34/268 (12%)

Query: 104 RATVYIFTSQSTKAIEDLTQLVEDTSVDPKIKVNAHIKRAVVHLHAASDFTKAFADLDEA 163
           RA  Y  +++  KAIED  + ++    D       +         A + +++A  D D+A
Sbjct: 67  RACSYYCSNKYDKAIEDYDKAIKLNPNDA-----CYFNNRGHSYFALNKYSEAIEDYDKA 121

Query: 164 EKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPN---FHVARAQRHF---VVHK 217
            K+DPN A  YY+RG  Y    +Y++A+ + +K I L+PN   +  +R   ++     +K
Sbjct: 122 IKLDPNNASYYYKRGFSYYALNKYDKAIEDYNKAIKLDPNNAAYFSSRGDIYYYEKAYNK 181

Query: 218 MI---------------VPGDRERVEQSLKEFRNFVDTHSNVVE-------ACTLFAQVL 255
            I                  +R    + LK+++  ++ ++  ++        C       
Sbjct: 182 SIEDYNKAIKLDPNNAFYYDNRGLAYEKLKKYKEAINDYNKAIKLNPNNAFYCYNRGFTY 241

Query: 256 VDQEDFDGAEEYFNRSIRVDPENASLYVHRAMLMLQARGNVDEAIKLIEKAISIDKSCMF 315
              + +  A   ++++I++DP NAS + +R +      G   +A++  +KAI ++ +  F
Sbjct: 242 NKLKKYKEAINDYDKAIKLDPNNASYFNNRGV-AYNNLGEYSKALEDYDKAIKLNPNYTF 300

Query: 316 AYETLGTIEVQRGRLEEAVKCFNKALPL 343
           AY   G      G  EEA+  +NKA+ L
Sbjct: 301 AYNNKGITFDNLGEFEEAIMNYNKAIEL 328



 Score = 67.8 bits (164), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 51/199 (25%), Positives = 99/199 (49%), Gaps = 13/199 (6%)

Query: 153 FTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPN---FHVARA 209
           + +A  D + A +++ N A  YY R   Y    +Y++A+ + DK I LNPN   +   R 
Sbjct: 43  YEEAINDYNRAIELNLNNASYYYNRACSYYCSNKYDKAIEDYDKAIKLNPNDACYFNNRG 102

Query: 210 QRHFVVHKMIVPGDRERVEQSLKEFRNFVDTHSNVVEACTLFAQVLVDQEDFDGAEEYFN 269
             +F ++K       E +E   K  +  +D ++        F+   +++  +D A E +N
Sbjct: 103 HSYFALNKY-----SEAIEDYDKAIK--LDPNNASYYYKRGFSYYALNK--YDKAIEDYN 153

Query: 270 RSIRVDPENASLYVHRAMLMLQARGNVDEAIKLIEKAISIDKSCMFAYETLGTIEVQRGR 329
           ++I++DP NA+ +  R  +    +   +++I+   KAI +D +  F Y+  G    +  +
Sbjct: 154 KAIKLDPNNAAYFSSRGDIYYYEKA-YNKSIEDYNKAIKLDPNNAFYYDNRGLAYEKLKK 212

Query: 330 LEEAVKCFNKALPLARDEA 348
            +EA+  +NKA+ L  + A
Sbjct: 213 YKEAINDYNKAIKLNPNNA 231


>gi|425466275|ref|ZP_18845578.1| Tetratricopeptide repeat protein (fragment) [Microcystis aeruginosa
           PCC 9809]
 gi|389831304|emb|CCI26077.1| Tetratricopeptide repeat protein (fragment) [Microcystis aeruginosa
           PCC 9809]
          Length = 423

 Score = 83.6 bits (205), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 66/253 (26%), Positives = 123/253 (48%), Gaps = 16/253 (6%)

Query: 92  SSNHTKALARLLRATVYIFTSQSTKAIEDLTQLVEDTSVDPKIKVNAHIKRAVVHLHAAS 151
           + NH  A     R  +Y    +   A+ D  + +E   ++P   +  +  R  V+ +   
Sbjct: 130 NPNHANAYNN--RGNLYYDLQKYDLALADYDKAIE---INPNFAI-LYYNRGGVY-YNQQ 182

Query: 152 DFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQR 211
            +  A +D+++A  ++PN A++YY RG IY    +YE AL +++K I LNPN+  A   R
Sbjct: 183 KYELALSDINKAIDINPNYAEAYYNRGNIYYDLQKYELALSDINKAIELNPNYAEAYNNR 242

Query: 212 HFVVHKMIVPGDRERVEQSLKEFRNFVDTHSNVVEACTLFAQVLVDQEDFDGAEEYFNRS 271
             +        D ++ + +L ++   +D + N+ EA      +   QE +D A   ++++
Sbjct: 243 GLLYK------DLQKYDLALSDYSKAIDINPNLAEAYVNRGVLYRLQEKYDLALSDYSKA 296

Query: 272 IRVDPENASLYVHRAMLM-LQARGNVDEAIKLIEKAISIDKSCMFAYETLGTIEVQRGRL 330
           I ++   A  Y +R +L  LQ +   D A+    KAI I+ +   AY   G +   + + 
Sbjct: 297 IEINRNLAGTYYNRGVLYRLQEK--YDLALADWNKAIEINPNYAEAYVNRGVLYFGQKKY 354

Query: 331 EEAVKCFNKALPL 343
           E A+  +NKA+ +
Sbjct: 355 ELALSDYNKAIEI 367



 Score = 75.9 bits (185), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 65/277 (23%), Positives = 127/277 (45%), Gaps = 23/277 (8%)

Query: 74  HEDYLTAIRHCTEEIESTSSNHTKALARLLRATVYIFTSQSTKAIEDLTQLVEDTSVDPK 133
           +E  LT I      + +  + + +  A L         S+  +  E L  + +   + P+
Sbjct: 49  YEQALTVINQAISLVPNNPNYYNEKWAVL---------SELKRYDEGLAAITQAIDLAPR 99

Query: 134 IKVNAHIKRAVVHLHAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRN 193
                ++ R +++      +  A  D ++A K++PN A++Y  RG +Y    +Y+ AL +
Sbjct: 100 AAW--YVNRGILY-RRQQKYELALDDYNKAIKLNPNHANAYNNRGNLYYDLQKYDLALAD 156

Query: 194 LDKTIALNPNFHVARAQRHFVVHKMIVPGDRERVEQSLKEFRNFVDTHSNVVEACTLFAQ 253
            DK I +NPNF +    R  V +      ++++ E +L +    +D + N  EA      
Sbjct: 157 YDKAIEINPNFAILYYNRGGVYY------NQQKYELALSDINKAIDINPNYAEAYYNRGN 210

Query: 254 VLVDQEDFDGAEEYFNRSIRVDPENASLYVHRAMLM--LQARGNVDEAIKLIEKAISIDK 311
           +  D + ++ A    N++I ++P  A  Y +R +L   LQ     D A+    KAI I+ 
Sbjct: 211 IYYDLQKYELALSDINKAIELNPNYAEAYNNRGLLYKDLQK---YDLALSDYSKAIDINP 267

Query: 312 SCMFAYETLGTIEVQRGRLEEAVKCFNKALPLARDEA 348
           +   AY   G +   + + + A+  ++KA+ + R+ A
Sbjct: 268 NLAEAYVNRGVLYRLQEKYDLALSDYSKAIEINRNLA 304



 Score = 73.6 bits (179), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 91/383 (23%), Positives = 167/383 (43%), Gaps = 47/383 (12%)

Query: 149 AASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVAR 208
           A  ++ +A   +++A  + PN  + Y ++  +     +Y+E L  + + I L P     R
Sbjct: 45  ARENYEQALTVINQAISLVPNNPNYYNEKWAVLSELKRYDEGLAAITQAIDLAP-----R 99

Query: 209 AQRHFVVHKMIVPGDRERVEQSLKEFRNFVDTHSNVVEACTLFAQVLVDQEDFDGAEEYF 268
           A   + V++ I+   +++ E +L ++   +  + N   A      +  D + +D A   +
Sbjct: 100 AA--WYVNRGILYRRQQKYELALDDYNKAIKLNPNHANAYNNRGNLYYDLQKYDLALADY 157

Query: 269 NRSIRVDPENASLYVHRAMLMLQARGNVDEAIKLIEKAISIDKSCMFAYETLGTIEVQRG 328
           +++I ++P  A LY +R  +    +   + A+  I KAI I+ +   AY   G I     
Sbjct: 158 DKAIEINPNFAILYYNRGGVYYNQQ-KYELALSDINKAIDINPNYAEAYYNRGNIYYDLQ 216

Query: 329 RLEEAVKCFNKALPLARDEAELSHIYSLRDAAIAQMKVCERYNIKKKVSPRSQNITKNEK 388
           + E A+   NKA+ L  + AE  +   L        K  ++Y++   +S  S+ I  N  
Sbjct: 217 KYELALSDINKAIELNPNYAEAYNNRGLL------YKDLQKYDLA--LSDYSKAIDINPN 268

Query: 389 LAIKQLRENNDIIIRPADKGGKTVVMDKADYTQKMTSILNSNDYEIIPGDPTKTIEESEK 448
           LA  +   N  ++ R  +K                        Y++   D +K IE +  
Sbjct: 269 LA--EAYVNRGVLYRLQEK------------------------YDLALSDYSKAIEINRN 302

Query: 449 Y-GNLENESGQKHAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQ--YEEALRN 505
             G   N          +  A AD ++A +++PN A++Y  RG +Y  FGQ  YE AL +
Sbjct: 303 LAGTYYNRGVLYRLQEKYDLALADWNKAIEINPNYAEAYVNRGVLY--FGQKKYELALSD 360

Query: 506 LDKTIALNPNFHVARAQRHFVWT 528
            +K I +NPN   A   R  ++ 
Sbjct: 361 YNKAIEINPNLAQAYLGRGGLYA 383



 Score = 59.7 bits (143), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 35/109 (32%), Positives = 57/109 (52%), Gaps = 1/109 (0%)

Query: 432 YEIIPGDPTKTIEESEKYGNLE-NESGQKHAASDFTKAFADLDEAEKVDPNVADSYYQRG 490
           Y++   D  K IE +  +  L  N  G  +    +  A +D+++A  ++PN A++YY RG
Sbjct: 150 YDLALADYDKAIEINPNFAILYYNRGGVYYNQQKYELALSDINKAIDINPNYAEAYYNRG 209

Query: 491 QIYCLFGQYEEALRNLDKTIALNPNFHVARAQRHFVWTSTLAELMAFSD 539
            IY    +YE AL +++K I LNPN+  A   R  ++       +A SD
Sbjct: 210 NIYYDLQKYELALSDINKAIELNPNYAEAYNNRGLLYKDLQKYDLALSD 258



 Score = 58.9 bits (141), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 77/362 (21%), Positives = 150/362 (41%), Gaps = 59/362 (16%)

Query: 187 YEEALRNLDKTIALNPNFHVARAQRHFVVHKMIVPGDRERVEQSLKEFRNFVDTHSNV-- 244
           YE+AL  +++ I+L PN        ++   K  V  + +R ++ L      +D       
Sbjct: 49  YEQALTVINQAISLVPN------NPNYYNEKWAVLSELKRYDEGLAAITQAIDLAPRAAW 102

Query: 245 -VEACTLFAQVLVDQEDFDGAEEYFNRSIRVDPENASLYVHRAMLMLQARGNVDEAIKLI 303
            V    L+ +    Q+ ++ A + +N++I+++P +A+ Y +R  L    +   D A+   
Sbjct: 103 YVNRGILYRR----QQKYELALDDYNKAIKLNPNHANAYNNRGNLYYDLQ-KYDLALADY 157

Query: 304 EKAISIDKSCMFAYETLGTIEVQRGRLEEAVKCFNKALPLARDEAELSH-----IYSLRD 358
           +KAI I+ +    Y   G +   + + E A+   NKA+ +  + AE  +      Y L+ 
Sbjct: 158 DKAIEINPNFAILYYNRGGVYYNQQKYELALSDINKAIDINPNYAEAYYNRGNIYYDLQK 217

Query: 359 AAIAQMKVCERYNIKKKVSPRSQNITKNEKLAIKQLRENNDIIIRPADKGGKTVVMDKAD 418
             +A   +    N   +++P       N  L  K L++                      
Sbjct: 218 YELALSDI----NKAIELNPNYAEAYNNRGLLYKDLQK---------------------- 251

Query: 419 YTQKMTSILNSNDYEIIPGDPTKTIEESEKYGNLENESGQKHAASD-FTKAFADLDEAEK 477
                        Y++   D +K I+ +          G  +   + +  A +D  +A +
Sbjct: 252 -------------YDLALSDYSKAIDINPNLAEAYVNRGVLYRLQEKYDLALSDYSKAIE 298

Query: 478 VDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQRHFVWTSTLAELMAF 537
           ++ N+A +YY RG +Y L  +Y+ AL + +K I +NPN+  A   R  ++       +A 
Sbjct: 299 INRNLAGTYYNRGVLYRLQEKYDLALADWNKAIEINPNYAEAYVNRGVLYFGQKKYELAL 358

Query: 538 SD 539
           SD
Sbjct: 359 SD 360



 Score = 45.4 bits (106), Expect = 0.077,   Method: Compositional matrix adjust.
 Identities = 35/120 (29%), Positives = 59/120 (49%), Gaps = 9/120 (7%)

Query: 94  NHTKALARLLRATVYIFTSQSTKAIEDLTQLVEDTSVDPKIKVNAHIKRAVVHLHAASDF 153
           N   A A + R  +Y    +   A+ D ++ +E   ++  +    + +  +  L    D 
Sbjct: 266 NPNLAEAYVNRGVLYRLQEKYDLALSDYSKAIE---INRNLAGTYYNRGVLYRLQEKYDL 322

Query: 154 TKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQ--YEEALRNLDKTIALNPNFHVARAQR 211
             A AD ++A +++PN A++Y  RG +Y  FGQ  YE AL + +K I +NPN   A   R
Sbjct: 323 --ALADWNKAIEINPNYAEAYVNRGVLY--FGQKKYELALSDYNKAIEINPNLAQAYLGR 378



 Score = 43.1 bits (100), Expect = 0.42,   Method: Compositional matrix adjust.
 Identities = 23/87 (26%), Positives = 46/87 (52%), Gaps = 5/87 (5%)

Query: 104 RATVYIFTSQSTKAIEDLTQLVEDTSVDPKIKVNAHIKRAVVHLHAASDFTKAFADLDEA 163
           R  +Y    +   A+ D  + +E   ++P     A++ R V++      +  A +D ++A
Sbjct: 310 RGVLYRLQEKYDLALADWNKAIE---INPNY-AEAYVNRGVLYF-GQKKYELALSDYNKA 364

Query: 164 EKVDPNVADSYYQRGQIYCLFGQYEEA 190
            +++PN+A +Y  RG +Y + GQ E+A
Sbjct: 365 IEINPNLAQAYLGRGGLYAILGQPEKA 391


>gi|422301645|ref|ZP_16389012.1| Tetratricopeptide repeat protein [Microcystis aeruginosa PCC 9806]
 gi|389789312|emb|CCI14645.1| Tetratricopeptide repeat protein [Microcystis aeruginosa PCC 9806]
          Length = 642

 Score = 83.6 bits (205), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 85/385 (22%), Positives = 163/385 (42%), Gaps = 24/385 (6%)

Query: 151 SDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQ 210
            DF  A A  D+A ++ P+V +++  RG      G++EEA+ + D+ +   P++H A   
Sbjct: 164 GDFIGAIASYDQALEIKPDVHEAWNNRGIALDNLGRFEEAIASYDQALEFKPDYHEAWNN 223

Query: 211 RHFVVHKMIVPGDRERVEQSLKEFRNFVDTHSNVVEACTLFAQVLVDQEDFDGAEEY--F 268
           R   +  +       R+ +++  +   ++   +  EA       L +   F  AEE   +
Sbjct: 224 RGIALDNL------GRLAEAIASYDKALEIKPDKHEAWYNRGNALGNLGRF--AEEIASY 275

Query: 269 NRSIRVDPENASLYVHRAMLMLQARGNVDEAIKLIEKAISIDKSCMFAYETLGTIEVQRG 328
            R++ + P+    + +R    L   G  ++AI   +KA+ I      A+   G      G
Sbjct: 276 GRALEIKPDKHEAWYNRGN-ALGNLGRFEQAIASYDKALEIKPDDHLAWYNRGVALGNLG 334

Query: 329 RLEEAVKCFNKALPLARDEAELSHIYSLRDAAIAQMKVCER----YNIKKKVSPRSQNIT 384
           RLEEA+  +++AL +  D       ++ R  A+  +   E     Y+   K+ P      
Sbjct: 335 RLEEAIASYDQALEIKPD---FHLAWTNRGVALGNLGRLEEAIASYDQALKIQPDFHLAW 391

Query: 385 KNEKLAIKQLRENNDIIIRPADKGGKTVVMDKADYTQKMTSILNSNDY--EIIPGDPTKT 442
            N   A+  L    + I    D+           +T +  +++N   +  EI   D  + 
Sbjct: 392 TNRGAALVNLGRWAEAIA-SCDRALAIKPDLHQAWTNRGAALVNLGRWAEEIASYD--RA 448

Query: 443 IEESEKYGNLENESGQKHA-ASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEE 501
           +E    Y       G   A    + +  A  D+A ++ P+   ++Y RG      G++E+
Sbjct: 449 LEFKPDYHEAWYNRGVALANLGRWAEEIASYDKALEIKPDDHLAWYNRGIALANLGRFEQ 508

Query: 502 ALRNLDKTIALNPNFHVARAQRHFV 526
           A+ + D+ + + P+FH A + R  V
Sbjct: 509 AIASYDRVLEIKPDFHPAWSDRGIV 533



 Score = 75.9 bits (185), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 83/413 (20%), Positives = 169/413 (40%), Gaps = 38/413 (9%)

Query: 127 DTSVDPKIKVNAHIKRAVVHLHAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQ 186
           D +++ K  V+       + L     F +A A  D+A +  P+  +++  RG      G+
Sbjct: 174 DQALEIKPDVHEAWNNRGIALDNLGRFEEAIASYDQALEFKPDYHEAWNNRGIALDNLGR 233

Query: 187 YEEALRNLDKTIALNPNFHVARAQRHFVVHKMIVPGDRERVEQSLKEFRNFVDTHSNVVE 246
             EA+ + DK + + P+ H A   R   +      G+  R  + +  +   ++   +  E
Sbjct: 234 LAEAIASYDKALEIKPDKHEAWYNRGNAL------GNLGRFAEEIASYGRALEIKPDKHE 287

Query: 247 ACTLFAQVLVDQEDFDGAEEYFNRSIRVDPENASLYVHRAMLMLQARGNVDEAIKLIEKA 306
           A       L +   F+ A   +++++ + P++   + +R +  L   G ++EAI   ++A
Sbjct: 288 AWYNRGNALGNLGRFEQAIASYDKALEIKPDDHLAWYNRGV-ALGNLGRLEEAIASYDQA 346

Query: 307 ISIDKSCMFAYETLGTIEVQRGRLEEAVKCFNKALPLARDEAELSHIYSLRDAAIAQMK- 365
           + I      A+   G      GRLEEA+  +++AL +  D       ++ R AA+  +  
Sbjct: 347 LEIKPDFHLAWTNRGVALGNLGRLEEAIASYDQALKIQPD---FHLAWTNRGAALVNLGR 403

Query: 366 ------VCERY-----NIKKKVSPRSQNITKNEKLAIKQLRENNDIIIRP----ADKGGK 410
                  C+R      ++ +  + R   +    + A +    +  +  +P    A     
Sbjct: 404 WAEAIASCDRALAIKPDLHQAWTNRGAALVNLGRWAEEIASYDRALEFKPDYHEAWYNRG 463

Query: 411 TVVMDKADYTQKMTSILNSNDYEIIPGDPTKTIEESEKYGNLENESGQKHAASDFTKAFA 470
             + +   + +++ S       EI P D            NL            F +A A
Sbjct: 464 VALANLGRWAEEIASY--DKALEIKPDDHLAWYNRGIALANL----------GRFEQAIA 511

Query: 471 DLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQR 523
             D   ++ P+   ++  RG +    G++EEAL + D+ +A+ P+FH+A   R
Sbjct: 512 SYDRVLEIKPDFHPAWSDRGIVLDNLGRFEEALASCDQALAIKPDFHLAWTNR 564



 Score = 56.2 bits (134), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 52/264 (19%), Positives = 115/264 (43%), Gaps = 14/264 (5%)

Query: 88  IESTSSNHTKALARLLRATVYIFTSQSTKAIEDLTQLVED-TSVDPKIKVNAHIKRAVVH 146
           +E   +++ +AL   ++   ++  +    A+ +L +  E   S D  + +   + +A  +
Sbjct: 370 LEEAIASYDQALK--IQPDFHLAWTNRGAALVNLGRWAEAIASCDRALAIKPDLHQAWTN 427

Query: 147 LHAA----SDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNP 202
             AA      + +  A  D A +  P+  +++Y RG      G++ E + + DK + + P
Sbjct: 428 RGAALVNLGRWAEEIASYDRALEFKPDYHEAWYNRGVALANLGRWAEEIASYDKALEIKP 487

Query: 203 NFHVARAQRHFVVHKMIVPGDRERVEQSLKEFRNFVDTHSNVVEACTLFAQVLVDQEDFD 262
           + H+A   R   +  +       R EQ++  +   ++   +   A +    VL +   F+
Sbjct: 488 DDHLAWYNRGIALANL------GRFEQAIASYDRVLEIKPDFHPAWSDRGIVLDNLGRFE 541

Query: 263 GAEEYFNRSIRVDPENASLYVHRAMLMLQARGNVDEAIKLIEKAISIDKSCMFAYETLGT 322
            A    ++++ + P+    + +R   ++   G   EAI   ++A++I      A+   G 
Sbjct: 542 EALASCDQALAIKPDFHLAWTNRGAALVNL-GRWAEAIASCDRALAIKPDLHQAWTNRGA 600

Query: 323 IEVQRGRLEEAVKCFNKALPLARD 346
             V  GR  EA+   ++AL +  D
Sbjct: 601 ALVNLGRWAEAIASCDRALEIKPD 624



 Score = 45.4 bits (106), Expect = 0.076,   Method: Compositional matrix adjust.
 Identities = 21/66 (31%), Positives = 37/66 (56%)

Query: 458 QKHAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFH 517
           QK+   DF  A A  D+A ++ P+V +++  RG      G++EEA+ + D+ +   P++H
Sbjct: 159 QKYTNGDFIGAIASYDQALEIKPDVHEAWNNRGIALDNLGRFEEAIASYDQALEFKPDYH 218

Query: 518 VARAQR 523
            A   R
Sbjct: 219 EAWNNR 224


>gi|334120659|ref|ZP_08494738.1| Tetratricopeptide TPR_1 repeat-containing protein [Microcoleus
           vaginatus FGP-2]
 gi|333456261|gb|EGK84896.1| Tetratricopeptide TPR_1 repeat-containing protein [Microcoleus
           vaginatus FGP-2]
          Length = 346

 Score = 83.2 bits (204), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 56/227 (24%), Positives = 115/227 (50%), Gaps = 12/227 (5%)

Query: 117 AIEDLTQLVEDTSVDPKIKVNAHIKRAVVHLHAASDFTKAFADLDEAEKVDPNVADSYYQ 176
           A+ED  Q+++    D K    A+  R +V+ +   D+ KA ADL +A  ++PN  ++Y  
Sbjct: 22  ALEDFDQILQVNPADAK----AYNNRGLVYYYM-KDYQKAIADLSQALDINPNFFEAYLN 76

Query: 177 RGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQRHFVVHKMIVPGDRERVEQSLKEFRN 236
           RG  +   G++E+A+ +L+  +A  PN H     R  V+  +         E++++++  
Sbjct: 77  RGNAWRHLGEHEKAIEDLNCALANKPNSHAIYNNRGLVLANL------GNYEEAIEDYNR 130

Query: 237 FVDTHSNVVEACTLFAQVLVDQEDFDGAEEYFNRSIRVDPENASLYVHRAMLMLQARGNV 296
            +  +S+  +      +      + + A E FN ++R++P+    Y++R +   Q  G+ 
Sbjct: 131 ALSINSHNYKTYYNRGRAYYLLGEKEAATENFNETLRLNPKYIKAYINRGLCYHQL-GDN 189

Query: 297 DEAIKLIEKAISIDKSCMFAYETLGTIEVQRGRLEEAVKCFNKALPL 343
            +AI     A+ ID   ++AY   G +  +  +++ A++ F+KA+ L
Sbjct: 190 TQAIADYNTALGIDPQNVYAYYNRGCVRYKLKQMQLAIEDFDKAVKL 236



 Score = 54.3 bits (129), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 33/115 (28%), Positives = 55/115 (47%), Gaps = 5/115 (4%)

Query: 104 RATVYIFTSQSTKAIEDLTQLVEDTSVDPKIKVNAHIKRAVVHLHAASDFTKAFADLDEA 163
           R   Y    +   A E+     E   ++PK  + A+I R + + H   D T+A AD + A
Sbjct: 145 RGRAYYLLGEKEAATENFN---ETLRLNPKY-IKAYINRGLCY-HQLGDNTQAIADYNTA 199

Query: 164 EKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQRHFVVHKM 218
             +DP    +YY RG +     Q + A+ + DK + L+PN+  A   R   ++K+
Sbjct: 200 LGIDPQNVYAYYNRGCVRYKLKQMQLAIEDFDKAVKLDPNYVKAYLNRGLALYKL 254



 Score = 48.1 bits (113), Expect = 0.012,   Method: Compositional matrix adjust.
 Identities = 44/170 (25%), Positives = 75/170 (44%), Gaps = 7/170 (4%)

Query: 174 YYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQRHFVVHKMIVPGDRERVEQSLKE 233
           +Y+RG      G YE AL + D+ + +NP    A   R  V + M      +  ++++ +
Sbjct: 6   FYKRGLHSAKKGNYEAALEDFDQILQVNPADAKAYNNRGLVYYYM------KDYQKAIAD 59

Query: 234 FRNFVDTHSNVVEACTLFAQVLVDQEDFDGAEEYFNRSIRVDPENASLYVHRAMLMLQAR 293
               +D + N  EA            + + A E  N ++   P + ++Y +R  L+L   
Sbjct: 60  LSQALDINPNFFEAYLNRGNAWRHLGEHEKAIEDLNCALANKPNSHAIYNNRG-LVLANL 118

Query: 294 GNVDEAIKLIEKAISIDKSCMFAYETLGTIEVQRGRLEEAVKCFNKALPL 343
           GN +EAI+   +A+SI+      Y   G      G  E A + FN+ L L
Sbjct: 119 GNYEEAIEDYNRALSINSHNYKTYYNRGRAYYLLGEKEAATENFNETLRL 168



 Score = 46.6 bits (109), Expect = 0.035,   Method: Compositional matrix adjust.
 Identities = 61/268 (22%), Positives = 105/268 (39%), Gaps = 42/268 (15%)

Query: 260 DFDGAEEYFNRSIRVDPENASLYVHRAMLMLQARGNVDEAIKLIEKAISIDKSCMFAYET 319
           +++ A E F++ ++V+P +A  Y +R ++    + +  +AI  + +A+ I+ +   AY  
Sbjct: 18  NYEAALEDFDQILQVNPADAKAYNNRGLVYYYMK-DYQKAIADLSQALDINPNFFEAYLN 76

Query: 320 LGTIEVQRGRLEEAVKCFNKALPLARDEAELSHIYSLRDAAIAQM----KVCERYNIKKK 375
            G      G  E+A++  N AL    ++     IY+ R   +A +    +  E YN    
Sbjct: 77  RGNAWRHLGEHEKAIEDLNCALA---NKPNSHAIYNNRGLVLANLGNYEEAIEDYNRALS 133

Query: 376 VSPRSQNITKNEKLAIKQLRENNDIIIRPADKGGKTVVMDKADYTQKMTSILNSNDYEII 435
           ++  +     N   A   L E                   K   T+     L  N     
Sbjct: 134 INSHNYKTYYNRGRAYYLLGE-------------------KEAATENFNETLRLN----- 169

Query: 436 PGDPTKTIEESEKYGNLENESGQKHAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCL 495
           P      I     Y          H   D T+A AD + A  +DP    +YY RG +   
Sbjct: 170 PKYIKAYINRGLCY----------HQLGDNTQAIADYNTALGIDPQNVYAYYNRGCVRYK 219

Query: 496 FGQYEEALRNLDKTIALNPNFHVARAQR 523
             Q + A+ + DK + L+PN+  A   R
Sbjct: 220 LKQMQLAIEDFDKAVKLDPNYVKAYLNR 247



 Score = 46.2 bits (108), Expect = 0.039,   Method: Compositional matrix adjust.
 Identities = 22/63 (34%), Positives = 36/63 (57%)

Query: 464 DFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQR 523
           D+ KA ADL +A  ++PN  ++Y  RG  +   G++E+A+ +L+  +A  PN H     R
Sbjct: 52  DYQKAIADLSQALDINPNFFEAYLNRGNAWRHLGEHEKAIEDLNCALANKPNSHAIYNNR 111

Query: 524 HFV 526
             V
Sbjct: 112 GLV 114



 Score = 43.5 bits (101), Expect = 0.28,   Method: Compositional matrix adjust.
 Identities = 20/65 (30%), Positives = 34/65 (52%)

Query: 463 SDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQ 522
            ++  A  D D+  +V+P  A +Y  RG +Y     Y++A+ +L + + +NPNF  A   
Sbjct: 17  GNYEAALEDFDQILQVNPADAKAYNNRGLVYYYMKDYQKAIADLSQALDINPNFFEAYLN 76

Query: 523 RHFVW 527
           R   W
Sbjct: 77  RGNAW 81


>gi|159028674|emb|CAO88145.1| unnamed protein product [Microcystis aeruginosa PCC 7806]
          Length = 837

 Score = 83.2 bits (204), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 87/376 (23%), Positives = 154/376 (40%), Gaps = 45/376 (11%)

Query: 153 FTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQRH 212
           + +A A  D A ++ P+  +++Y RG      G+ EEA+ + D+ + + P+ H A   R 
Sbjct: 488 YQEAIASYDRALEIKPDYHEAWYNRGIALDDLGRLEEAIASYDRALEIKPDKHEAWYNRG 547

Query: 213 FVVHKMIVPGDRERVEQSLKEFRNFVDTHSNVVEACTLFAQVLVDQEDFDGAEEYFNRSI 272
           F +      G+  R EQ++  +   ++   +  EA       L +   F+ A   ++R++
Sbjct: 548 FAL------GNLGRFEQAIASYDRALEIKPDKHEAWYNRGFALGNLGRFEQAIASYDRAL 601

Query: 273 RVDPENASLYVHRAMLMLQARGNVDEAIKLIEKAISIDKSCMFAYETLGTIEVQRGRLEE 332
            + P+    + +R    L   G  ++AI   ++A+ I      A+   G      GRLEE
Sbjct: 602 EIKPDKHEAWYNRG-FALGNLGRFEQAIASYDRALEIKPDDHEAWNNRGIALDDLGRLEE 660

Query: 333 AVKCFNKALPLARD--EAELSHIYSLRDAAIAQMKVCERYNIKKKVSPRSQNITKNEKLA 390
           A+  F++AL +  D  EA  +  ++L +    +  +   Y+   ++ P       N   A
Sbjct: 661 AIASFDRALEIKPDKHEAWYNRGFALGNLGRFEQAIAS-YDRALEIKPDKHEAWYNRGFA 719

Query: 391 IKQLRENNDIIIRPADKGGKTVVMDKADYTQKMTSILNSNDYEIIPGDPTKTIEESEKYG 450
           +  L      I               A Y + +         EI P D           G
Sbjct: 720 LGNLGRFEQAI---------------ASYDRAL---------EIKPDDHEAWNNRGIALG 755

Query: 451 NLENESGQKHAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTI 510
           NL            F +A A  D A K++ N AD+YY +   Y L    E A+ NL + I
Sbjct: 756 NL----------GRFEEAIASFDRAIKINSNDADAYYNKACCYGLQNNVELAIENLQRAI 805

Query: 511 ALNPNFH-VARAQRHF 525
            L+  +  +A+  + F
Sbjct: 806 NLDVKYQDMAKTDKDF 821



 Score = 69.7 bits (169), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 77/399 (19%), Positives = 154/399 (38%), Gaps = 48/399 (12%)

Query: 121 LTQLVEDTSVDPKIKVNAHIKRAVVHLHAASDFTKAFADLDEAEKVDPNVADSYYQRGQI 180
           L QL+     +  +++   +    + L+    +  A    +      P   D ++ RG  
Sbjct: 422 LKQLIWQLFEEKPLEMLPSLAGFTLKLYELKRYQDALKGFNRLVSFAPQWEDGWFYRGTT 481

Query: 181 YCLFGQYEEALRNLDKTIALNPNFHVARAQRHFVVHKMIVPGDRERVEQSLKEFRNFVDT 240
           +    QY+EA+ + D+ + + P++H A   R   +       D  R+E+++  +   ++ 
Sbjct: 482 FGYLEQYQEAIASYDRALEIKPDYHEAWYNRGIALD------DLGRLEEAIASYDRALEI 535

Query: 241 HSNVVEACTLFAQVLVDQEDFDGAEEYFNRSIRVDPENASLYVHRAMLMLQARGNVDEAI 300
             +  EA       L +   F+ A   ++R++ + P+    + +R    L   G  ++AI
Sbjct: 536 KPDKHEAWYNRGFALGNLGRFEQAIASYDRALEIKPDKHEAWYNRG-FALGNLGRFEQAI 594

Query: 301 KLIEKAISIDKSCMFAYETLGTIEVQRGRLEEAVKCFNKALPLARDEAELSHIYSLRDAA 360
              ++A+ I      A+   G      GR E+A+  +++AL +  D+ E    ++ R  A
Sbjct: 595 ASYDRALEIKPDKHEAWYNRGFALGNLGRFEQAIASYDRALEIKPDDHE---AWNNRGIA 651

Query: 361 IAQMKVCER----YNIKKKVSPRSQNITKNEKLAIKQLRENNDIIIRPADKGGKTVVMDK 416
           +  +   E     ++   ++ P       N   A+  L      I               
Sbjct: 652 LDDLGRLEEAIASFDRALEIKPDKHEAWYNRGFALGNLGRFEQAI--------------- 696

Query: 417 ADYTQKMTSILNSNDYEIIPGDPTKTIEESEKYGNLENESGQKHAASDFTKAFADLDEAE 476
           A Y + +         EI P             GNL            F +A A  D A 
Sbjct: 697 ASYDRAL---------EIKPDKHEAWYNRGFALGNL----------GRFEQAIASYDRAL 737

Query: 477 KVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPN 515
           ++ P+  +++  RG      G++EEA+ + D+ I +N N
Sbjct: 738 EIKPDDHEAWNNRGIALGNLGRFEEAIASFDRAIKINSN 776


>gi|390359306|ref|XP_795480.3| PREDICTED: mitochondrial import receptor subunit TOM70-like,
           partial [Strongylocentrotus purpuratus]
          Length = 286

 Score = 83.2 bits (204), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 62/183 (33%), Positives = 89/183 (48%), Gaps = 18/183 (9%)

Query: 1   MFMDRGAQHAKEEISKRSFFKPSKQFIKTYLKSFPNDPILQPDGLSNGVELTNGDTNESH 60
           M  + G + A E+ ++R    PS QFI++Y  SF ND          G+  T  D +   
Sbjct: 118 MLKEIGKEKAAEKYTERVPSLPSGQFIQSYFSSFSND----------GISAT-ADEDYCS 166

Query: 61  ELDLLS----KAKRAFEHEDYLTAIRHCTEEIESTSSNHTKALARLLRATVYIFTSQSTK 116
             D  S    KAK  F+   Y + I  CT+EI+S  S   +AL  L+RAT  +     + 
Sbjct: 167 PNDFSSTGYAKAKYCFKEGRYDSIIDACTDEIDSQGSKLPEAL--LMRATFRLLKGLGSL 224

Query: 117 AIEDLTQLVEDTSVDPKIKVNAHIKRAVVHLHAASDFTKAFADLDEAEKVDPNVADSYYQ 176
           A  DL  ++     D K+K NA IKR  +H+       +A AD + A  +DPN AD ++ 
Sbjct: 225 ARPDLDSVITLPEADKKLKANALIKRGSMHMQEGLQ-KEAMADFELAVTIDPNNADVFHH 283

Query: 177 RGQ 179
           RGQ
Sbjct: 284 RGQ 286


>gi|333986950|ref|YP_004519557.1| hypothetical protein MSWAN_0723 [Methanobacterium sp. SWAN-1]
 gi|333825094|gb|AEG17756.1| Tetratricopeptide TPR_1 repeat-containing protein [Methanobacterium
           sp. SWAN-1]
          Length = 401

 Score = 83.2 bits (204), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 84/391 (21%), Positives = 178/391 (45%), Gaps = 47/391 (12%)

Query: 136 VNAHIKRAVVHLHAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLD 195
            NA   + VV L    ++ ++    D+A ++DPN  + +Y +G  +    +Y EAL   D
Sbjct: 46  TNAWYGKGVV-LGKLENYPESLECYDKALELDPNYFNVWYNKGYTFVKLEKYREALECYD 104

Query: 196 KTIALNPNFHVARAQRHFVVHKMIVPGDRERVEQSLKEFRNFVDTHSNVVEACTLFAQVL 255
           K + L+PN+      + + + ++      E +E +L+ +   ++   N           L
Sbjct: 105 KALELDPNYFGVWFNKGYALTEL-----GEYLE-ALECYDEALELDPNYFGVWFNKGYAL 158

Query: 256 VDQEDFDGAEEYFNRSIRVDPENASLYVHRAMLMLQARGNVDEAIKLIEKAISIDKSCMF 315
            +  ++  A + ++ ++ +DP +A+ + +R  ++ + +  V EAI+  +KA+ I+    +
Sbjct: 159 TELGEYSEAVKSYDTALGIDPSDATTWYNRGNILTKLKKYV-EAIESYDKALEINPKFTY 217

Query: 316 AYETLGTIEVQRGRLEEAVKCFNKALPLARDE--AELSHIYSLRDAAIAQ-MKVCERYNI 372
           A+   G+   +  +  EAV+ ++KAL +      A  +  YSL  AA+ + ++  + Y+ 
Sbjct: 218 AWTGRGSALTELKKHLEAVESYDKALEIDPKHVLAWFNRGYSL--AALGKYLEAVKSYDR 275

Query: 373 KKKVSPRSQNITKNEKLAIKQLRENNDIIIRPADKGGKTVVMDKADYTQKMTSILNSNDY 432
             ++ P       ++  A+ +L + +D +             DKA               
Sbjct: 276 ALEIDPGDPITWFSKGYALAELGKYSDALES----------YDKA--------------- 310

Query: 433 EIIPGDPTKTIEESEKYGNLENESGQKHAASDFTKAFADLDEAEKVDPNVADSYYQRGQI 492
             +  DP  +I    K  N+  E G+      + +A    D+A ++DP+  +++  +G+ 
Sbjct: 311 --LAIDPIDSIALYNK-ANIMLEIGK------YPEALESFDKALEIDPDYVNAWNDKGET 361

Query: 493 YCLFGQYEEALRNLDKTIALNPNFHVARAQR 523
           +     Y+EAL+  +K + L+PNF  A   R
Sbjct: 362 FTKLENYQEALKCYEKALKLDPNFEDALKAR 392



 Score = 44.3 bits (103), Expect = 0.17,   Method: Compositional matrix adjust.
 Identities = 24/72 (33%), Positives = 37/72 (51%), Gaps = 4/72 (5%)

Query: 463 SDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQ 522
            ++++A    D A  +DP+ A ++Y RG I     +Y EA+ + DK + +NP F  A   
Sbjct: 162 GEYSEAVKSYDTALGIDPSDATTWYNRGNILTKLKKYVEAIESYDKALEINPKFTYAWTG 221

Query: 523 RHFVWTSTLAEL 534
           R     S L EL
Sbjct: 222 R----GSALTEL 229


>gi|220907546|ref|YP_002482857.1| hypothetical protein Cyan7425_2135 [Cyanothece sp. PCC 7425]
 gi|219864157|gb|ACL44496.1| Tetratricopeptide TPR_2 repeat protein [Cyanothece sp. PCC 7425]
          Length = 373

 Score = 83.2 bits (204), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 52/197 (26%), Positives = 97/197 (49%), Gaps = 7/197 (3%)

Query: 148 HAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVA 207
           +A  D+  A A +D+A +++PN A++Y  RG I    G Y+EA+ +LD+ I LNPN    
Sbjct: 62  YAREDYQGAIAAVDQAIRLNPNYAEAYLMRGSIQTELGNYQEAIADLDQGIKLNPN---- 117

Query: 208 RAQRHFVVHKMIVPGDRERVEQSLKEFRNFVDTHSNVVEACTLFAQVLVDQEDFDGAEEY 267
            A  +F+   + +  +   ++ +L ++   +  + N   A  +   + +  ++  GA   
Sbjct: 118 NASAYFIRGSIQL--ESGNLQGALADYNQVIRLYPNEANAYFIRGAIQLQLDNLQGAIAD 175

Query: 268 FNRSIRVDPENASLYVHRAMLMLQARGNVDEAIKLIEKAISIDKSCMFAYETLGTIEVQR 327
           FNR I+++P  A  Y  R  +     GN  EAI    + I +  +   AY   G +    
Sbjct: 176 FNRGIKLNPNEAKAYFIRGTIQA-GLGNYQEAIADFGQEIRLSPNDPLAYHRRGDLRAYT 234

Query: 328 GRLEEAVKCFNKALPLA 344
           G L+ A+  +++ + L+
Sbjct: 235 GDLQGAIADYDQVIRLS 251



 Score = 72.8 bits (177), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 69/271 (25%), Positives = 123/271 (45%), Gaps = 39/271 (14%)

Query: 258 QEDFDGAEEYFNRSIRVDPENASLYVHRAMLMLQARGNVDEAIKLIEKAISIDKSCMFAY 317
           +ED+ GA    +++IR++P  A  Y+ R  +  +  GN  EAI  +++ I ++ +   AY
Sbjct: 64  REDYQGAIAAVDQAIRLNPNYAEAYLMRGSIQTEL-GNYQEAIADLDQGIKLNPNNASAY 122

Query: 318 ETLGTIEVQRGRLEEAVKCFNKALPLARDEAELSHIYSLRDAAIAQMKVCERYNIKKKVS 377
              G+I+++ G L+ A+  +N+ + L  +EA   + Y +R A   Q+      N++  ++
Sbjct: 123 FIRGSIQLESGNLQGALADYNQVIRLYPNEA---NAYFIRGAIQLQLD-----NLQGAIA 174

Query: 378 PRSQNITKNEKLAIKQLRENNDIIIRPADKGGKTVVMDK-ADYTQKMTSILNSNDYEIIP 436
             ++ I  N         E     IR   + G     +  AD+ Q++          + P
Sbjct: 175 DFNRGIKLNPN-------EAKAYFIRGTIQAGLGNYQEAIADFGQEI---------RLSP 218

Query: 437 GDPTKTIEESEKYGNLENESGQKHAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLF 496
            DP        + G+L   +G      D   A AD D+  ++ PN   +YY RG      
Sbjct: 219 NDPLAY----HRRGDLRAYTG------DLQGAIADYDQVIRLSPNCHCAYYDRGFARAQS 268

Query: 497 GQYEEALRNLDKTIALNPNF---HVARAQRH 524
           G  + A+ + ++ I LNP F   +VAR   H
Sbjct: 269 GDLQGAIADYNQAIKLNPEFATVYVARGNAH 299



 Score = 57.8 bits (138), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 68/305 (22%), Positives = 124/305 (40%), Gaps = 42/305 (13%)

Query: 187 YEEALRNLDKTIALNPNFHVARAQRHFVVHKMIVPGDRERVEQSLKEFRNFVDTHSNVVE 246
           Y+ A+  +D+ I LNPN+  A   R  +  ++         ++++ +    +  + N   
Sbjct: 67  YQGAIAAVDQAIRLNPNYAEAYLMRGSIQTEL------GNYQEAIADLDQGIKLNPNNAS 120

Query: 247 ACTLFAQVLVDQEDFDGAEEYFNRSIRVDPENASLYVHRAMLMLQARGNVDEAIKLIEKA 306
           A  +   + ++  +  GA   +N+ IR+ P  A+ Y  R  + LQ   N+  AI    + 
Sbjct: 121 AYFIRGSIQLESGNLQGALADYNQVIRLYPNEANAYFIRGAIQLQLD-NLQGAIADFNRG 179

Query: 307 ISIDKSCMFAYETLGTIEVQRGRLEEAVKCFNKALPLARDEAELSHIYS-LRDAAIAQMK 365
           I ++ +   AY   GTI+   G  +EA+  F + + L+ ++    H    LR        
Sbjct: 180 IKLNPNEAKAYFIRGTIQAGLGNYQEAIADFGQEIRLSPNDPLAYHRRGDLRAYTGDLQG 239

Query: 366 VCERYNIKKKVSPRSQNITKNEKLAIKQLRENNDIIIRPADKGGKTVVMDKADYTQKMTS 425
               Y+   ++SP       +   A  Q  +    I               ADY Q +  
Sbjct: 240 AIADYDQVIRLSPNCHCAYYDRGFARAQSGDLQGAI---------------ADYNQAI-- 282

Query: 426 ILNSNDYEIIPGDPTKTIEESEKYGNLENESGQKHAASDFTKAFADLDEAEKVDPNVADS 485
                  ++ P   T  +      GN  +E G + AA       AD ++A K++P +A++
Sbjct: 283 -------KLNPEFATVYVAR----GNAHDELGNRQAA------IADYNQAIKLNPELAEA 325

Query: 486 YYQRG 490
           YY RG
Sbjct: 326 YYSRG 330



 Score = 57.4 bits (137), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 36/106 (33%), Positives = 58/106 (54%), Gaps = 12/106 (11%)

Query: 424 TSILNSNDYEIIPGDPTKTIEESEKYGNLENESGQKHAASDFTKAFADLDEAEKVDPNVA 483
           T+ + SN   +I    +K I   E +G    ++  K+A  D+  A A +D+A +++PN A
Sbjct: 34  TNAMTSNQPVLI----SKQISAEEFFG----QAKAKYAREDYQGAIAAVDQAIRLNPNYA 85

Query: 484 DSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQRHFVWTS 529
           ++Y  RG I    G Y+EA+ +LD+ I LNPN     A  +F+  S
Sbjct: 86  EAYLMRGSIQTELGNYQEAIADLDQGIKLNPN----NASAYFIRGS 127



 Score = 54.3 bits (129), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 70/326 (21%), Positives = 123/326 (37%), Gaps = 84/326 (25%)

Query: 73  EHEDYLTAIRHCTEEIESTSSNHTKALARLLRATVYIFTSQSTKAIEDLTQLVEDTSVDP 132
           E  +Y  AI    + I+   +N   A A  +R ++ + +     A+ D  Q++    + P
Sbjct: 97  ELGNYQEAIADLDQGIKLNPNN---ASAYFIRGSIQLESGNLQGALADYNQVIR---LYP 150

Query: 133 KIKVNAHIKRAVVHLHAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALR 192
             + NA+  R  + L    +   A AD +   K++PN A +Y+ RG I    G Y+EA+ 
Sbjct: 151 N-EANAYFIRGAIQLQL-DNLQGAIADFNRGIKLNPNEAKAYFIRGTIQAGLGNYQEAIA 208

Query: 193 NL----------------------------------DKTIALNPNFHVARAQRHFVVHKM 218
           +                                   D+ I L+PN H A   R F     
Sbjct: 209 DFGQEIRLSPNDPLAYHRRGDLRAYTGDLQGAIADYDQVIRLSPNCHCAYYDRGFA---- 264

Query: 219 IVPGDRERVEQSLKEFRNFVDTHSNVVEACTLFAQVLVDQEDFDGAEEYFNRSIRVDPEN 278
                  R +                               D  GA   +N++I+++PE 
Sbjct: 265 -------RAQSG-----------------------------DLQGAIADYNQAIKLNPEF 288

Query: 279 ASLYVHRAMLMLQARGNVDEAIKLIEKAISIDKSCMFAYETLGTIEVQRGRLEEAVKCFN 338
           A++YV R     +  GN   AI    +AI ++     AY + G      G  + A+  + 
Sbjct: 289 ATVYVARGNAHDEL-GNRQAAIADYNQAIKLNPELAEAYYSRGGNRRHSGDKQGAIADYQ 347

Query: 339 KALPLARDEAELSHIYSLRDAAIAQM 364
           KA  LA+ + +   +++L   A+ ++
Sbjct: 348 KAAELAQIQGD-KDLHTLTTQALGEL 372



 Score = 40.8 bits (94), Expect = 1.6,   Method: Compositional matrix adjust.
 Identities = 55/247 (22%), Positives = 103/247 (41%), Gaps = 49/247 (19%)

Query: 292 ARGNVDEAIKLIEKAISIDKSCMFAYETLGTIEVQRGRLEEAVKCFNKALPLARDEAELS 351
           AR +   AI  +++AI ++ +   AY   G+I+ + G  +EA+   ++ + L  + A   
Sbjct: 63  AREDYQGAIAAVDQAIRLNPNYAEAYLMRGSIQTELGNYQEAIADLDQGIKLNPNNAS-- 120

Query: 352 HIYSLRDAAIAQMKVCERYNIKKKVSPRSQNITKNEKLAIKQLRENNDIIIRPADKGGKT 411
             Y +R +        E  N++  ++  +Q I            E N   IR    G   
Sbjct: 121 -AYFIRGSI-----QLESGNLQGALADYNQVIRLYPN-------EANAYFIR----GAIQ 163

Query: 412 VVMDK-----ADYTQKMTSILNSNDYEIIPGDPTKTIEESEKY---GNLENESGQKHAAS 463
           + +D      AD+ + +   LN N              E++ Y   G ++   G      
Sbjct: 164 LQLDNLQGAIADFNRGIK--LNPN--------------EAKAYFIRGTIQAGLG------ 201

Query: 464 DFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQR 523
           ++ +A AD  +  ++ PN   +Y++RG +    G  + A+ + D+ I L+PN H A   R
Sbjct: 202 NYQEAIADFGQEIRLSPNDPLAYHRRGDLRAYTGDLQGAIADYDQVIRLSPNCHCAYYDR 261

Query: 524 HFVWTST 530
            F    +
Sbjct: 262 GFARAQS 268


>gi|428207485|ref|YP_007091838.1| hypothetical protein Chro_2486 [Chroococcidiopsis thermalis PCC
           7203]
 gi|428009406|gb|AFY87969.1| Tetratricopeptide TPR_1 repeat-containing protein
           [Chroococcidiopsis thermalis PCC 7203]
          Length = 424

 Score = 83.2 bits (204), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 66/247 (26%), Positives = 118/247 (47%), Gaps = 17/247 (6%)

Query: 100 ARLLRATVYIFTSQSTKA-IEDLTQLVEDTSVDPKIKVNAHIKRAVVHLHAASDFTKAFA 158
           A + R   Y+   Q+ +A I D T+ +E   VD   K+ AH+ RA  + +  +D++ A  
Sbjct: 77  AYICRGITYLEQKQNAEAAIADFTKAIE---VDSN-KIQAHVNRANAYSYL-NDYSAALK 131

Query: 159 DLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQRHFVVHKM 218
           DL  A  + P+ +DSY  RG I+   G Y  A+ +  + I LNP+F +A   R     K+
Sbjct: 132 DLSTAIHIAPDRSDSYLNRGYIWVRTGDYHAAVVDFSQAIVLNPDFAIAYLNRGNAYKKL 191

Query: 219 IVPGDRERVEQSLKEFRNFV---DTHS-NVVEACTLFAQVLVDQEDFDGAEEYFNRSIRV 274
                  + + +L ++   +    T+S NVV A     ++L    +   A   ++R+I +
Sbjct: 192 ------AQTQAALNDYAAVIHLDKTNSKNVVTAYVYRGEILESLGELAAAFSEYDRAIEL 245

Query: 275 DPENASLYVHRAMLMLQARGNVDEAIKLIEKAISIDKSCMFAYETLGTIEVQRGRLEEAV 334
            P+   L   R  L+ Q  G +  A++    AIS+D+ CM+ Y     +    G +  A+
Sbjct: 246 CPDEHFLQHKRGALLCQF-GQLSSALEHYNIAISLDRKCMYCYADRAWVRKNLGDISGAI 304

Query: 335 KCFNKAL 341
             +++ +
Sbjct: 305 ADWSQVI 311



 Score = 60.8 bits (146), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 85/409 (20%), Positives = 157/409 (38%), Gaps = 85/409 (20%)

Query: 160 LDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQRHFVVHKMI 219
            ++A K+DPN+ +  Y RG +Y +    ++A+ + D  I L+P  + A     ++   + 
Sbjct: 30  FNKALKLDPNLVEVIYNRGNLYSILKMSDKAISDYDLAIKLDPQHYKA-----YICRGIT 84

Query: 220 VPGDRERVEQSLKEFRNFVDTHSNVVEACTLFAQVLVDQEDFDGAEEYFNRSIRVDPENA 279
               ++  E ++ +F   ++  SN ++A    A       D+  A +  + +I + P+ +
Sbjct: 85  YLEQKQNAEAAIADFTKAIEVDSNKIQAHVNRANAYSYLNDYSAALKDLSTAIHIAPDRS 144

Query: 280 SLYVHRAMLMLQA--------------------------RGNVDEAIKLIEKA------- 306
             Y++R  + ++                           RGN  + +   + A       
Sbjct: 145 DSYLNRGYIWVRTGDYHAAVVDFSQAIVLNPDFAIAYLNRGNAYKKLAQTQAALNDYAAV 204

Query: 307 ISIDKS----CMFAYETLGTIEVQRGRLEEAVKCFNKALPLARDEAELSHIYSLRDAAIA 362
           I +DK+     + AY   G I    G L  A   +++A+ L  DE  L H    R A + 
Sbjct: 205 IHLDKTNSKNVVTAYVYRGEILESLGELAAAFSEYDRAIELCPDEHFLQH---KRGALLC 261

Query: 363 QM----KVCERYNIKKKVSPRSQNITKNEKLAIKQLRENNDIIIRPADKGGKTVVMDKAD 418
           Q        E YNI   +  +      +     K L + +  I               AD
Sbjct: 262 QFGQLSSALEHYNIAISLDRKCMYCYADRAWVRKNLGDISGAI---------------AD 306

Query: 419 YTQKMTSILNSNDYEIIPGDPTKTIEESEKYGNLENESGQ-KHAASDFTKAFADLDEAEK 477
           ++Q            +I  +P   +   E+ G L  +S Q K A +D+TKA         
Sbjct: 307 WSQ------------VIEQNPENVLAYIER-GELYFQSHQLKAAKADYTKAII------- 346

Query: 478 VDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQRHFV 526
           ++P+    Y  R ++         AL++ D+ I + P+F  A   R  V
Sbjct: 347 LEPDEPHFYVVRAEVNLSLNYLVAALKDCDRAIEIAPDFARANLIRTLV 395


>gi|218439885|ref|YP_002378214.1| hypothetical protein PCC7424_2942 [Cyanothece sp. PCC 7424]
 gi|218172613|gb|ACK71346.1| Tetratricopeptide TPR_2 repeat protein [Cyanothece sp. PCC 7424]
          Length = 632

 Score = 82.8 bits (203), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 65/248 (26%), Positives = 120/248 (48%), Gaps = 15/248 (6%)

Query: 155 KAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQRHFV 214
           +A A  ++A +++PN A +Y   G      G+ EEA+   +K I +NPN+    +   F 
Sbjct: 146 EAIAAYNKAIEINPNYAFAYIGLGIALYNQGKLEEAIAAYNKAIEINPNYAEVYSNLGFA 205

Query: 215 VHKMIVPGDRERVEQSLKEFRNFVDTHSNVVEACTLFAQVLVDQEDFDGAEEYFNRSIRV 274
           ++      ++ ++E+++  +   ++ + N   A       L +Q   + A   +N +I +
Sbjct: 206 LY------NQGKLEEAIAAYNTAIEINPNDAFAYNNLGIALSNQGKLEEAIAAYNTAIEI 259

Query: 275 DPENASLYVHRAMLMLQARGNVDEAIKLIEKAISIDKSCMFAYETLGTIEVQRGRLEEAV 334
           +P +A  Y +   + L  +G ++EAI     AI I+ +  FAY  LG     +G+LEEA+
Sbjct: 260 NPNDAFAY-NNLGVALYNQGKLEEAIAAYNTAIEINPNDAFAYIGLGIALHDQGKLEEAI 318

Query: 335 KCFNKALPLARDEAELSHIYSLRDAAIA-----QMKVCE---RYNIKKKVSPRSQNITKN 386
             +NK L LA  +A+ + +++L    +      Q K+ E    Y    K+ P +     N
Sbjct: 319 AAYNKTLSLADKKADRASVHTLAHTTLGYALQQQGKLEEAIAEYEKALKIDPNNTTAQNN 378

Query: 387 EKLAIKQL 394
            K A+ QL
Sbjct: 379 LKEALIQL 386



 Score = 82.0 bits (201), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 52/204 (25%), Positives = 100/204 (49%), Gaps = 7/204 (3%)

Query: 145 VHLHAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNF 204
           V L+      +A A  + A +++PN A+ Y   G      G+ EEA+   +K I +NPN+
Sbjct: 102 VALYYQGKLEEAIAAYNTAIEINPNYAEVYSNLGFALSNQGKLEEAIAAYNKAIEINPNY 161

Query: 205 HVARAQRHFVVHKMIVPGDRERVEQSLKEFRNFVDTHSNVVEACTLFAQVLVDQEDFDGA 264
             A       ++      ++ ++E+++  +   ++ + N  E  +     L +Q   + A
Sbjct: 162 AFAYIGLGIALY------NQGKLEEAIAAYNKAIEINPNYAEVYSNLGFALYNQGKLEEA 215

Query: 265 EEYFNRSIRVDPENASLYVHRAMLMLQARGNVDEAIKLIEKAISIDKSCMFAYETLGTIE 324
              +N +I ++P +A  Y +   + L  +G ++EAI     AI I+ +  FAY  LG   
Sbjct: 216 IAAYNTAIEINPNDAFAY-NNLGIALSNQGKLEEAIAAYNTAIEINPNDAFAYNNLGVAL 274

Query: 325 VQRGRLEEAVKCFNKALPLARDEA 348
             +G+LEEA+  +N A+ +  ++A
Sbjct: 275 YNQGKLEEAIAAYNTAIEINPNDA 298



 Score = 73.9 bits (180), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 92/407 (22%), Positives = 168/407 (41%), Gaps = 63/407 (15%)

Query: 151 SDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQ 210
            +FT+A     +  K++PN AD+Y   G      G+ EEA+   +  I +NPN+      
Sbjct: 40  GNFTEAERIFRQVIKINPNNADAYRYLGIALRNQGKLEEAIAAYNTAIEINPNYAEVYNN 99

Query: 211 RHFVVHKMIVPGDRERVEQSLKEFRNFVDTHSNVVEACTLFAQVLVDQEDFDGAEEYFNR 270
               ++       + ++E+++  +   ++ + N  E  +     L +Q   + A   +N+
Sbjct: 100 LGVALYY------QGKLEEAIAAYNTAIEINPNYAEVYSNLGFALSNQGKLEEAIAAYNK 153

Query: 271 SIRVDPENASLYVHRAMLMLQARGNVDEAIKLIEKAISIDKSCMFAYETLGTIEVQRGRL 330
           +I ++P  A  Y+    + L  +G ++EAI    KAI I+ +    Y  LG     +G+L
Sbjct: 154 AIEINPNYAFAYIGLG-IALYNQGKLEEAIAAYNKAIEINPNYAEVYSNLGFALYNQGKL 212

Query: 331 EEAVKCFNKALPLARDEAELSHIYSLRDAAIA---QMKVCE---RYNIKKKVSPRSQNIT 384
           EEA+  +N A+ +  ++A     ++  +  IA   Q K+ E    YN   +++P      
Sbjct: 213 EEAIAAYNTAIEINPNDA-----FAYNNLGIALSNQGKLEEAIAAYNTAIEINPNDAFAY 267

Query: 385 KNEKLAI---KQLRE-----NNDIIIRPADK----GGKTVVMDKADYTQKMTSILNSNDY 432
            N  +A+    +L E     N  I I P D     G    + D+    + + +       
Sbjct: 268 NNLGVALYNQGKLEEAIAAYNTAIEINPNDAFAYIGLGIALHDQGKLEEAIAAY------ 321

Query: 433 EIIPGDPTKTIEESEKYGNLENESGQKHAASDFT--------KAFADLDEAEKVDPNVAD 484
                   KT+  ++K  +  +     H    +         +A A+ ++A K+DPN   
Sbjct: 322 -------NKTLSLADKKADRASVHTLAHTTLGYALQQQGKLEEAIAEYEKALKIDPNNTT 374

Query: 485 SYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQRHFVWTSTL 531
           +              +EAL  L  TI L P+  V   Q+H  W   L
Sbjct: 375 AQ----------NNLKEALIQL--TIKLYPSLTVVDEQKHIPWDEPL 409



 Score = 69.3 bits (168), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 59/211 (27%), Positives = 101/211 (47%), Gaps = 14/211 (6%)

Query: 172 DSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQRHFVVHKMIVPGDRERVEQSL 231
           D  +++G      G + EA R   + I +NPN   A A R+      I   ++ ++E+++
Sbjct: 27  DQLFEQGNAAQNEGNFTEAERIFRQVIKINPNN--ADAYRYL----GIALRNQGKLEEAI 80

Query: 232 KEFRNFVDTHSNVVEACTLFAQVLVDQEDFDGAEEYFNRSIRVDPENASLYVHRAMLMLQ 291
             +   ++ + N  E        L  Q   + A   +N +I ++P  A +Y +     L 
Sbjct: 81  AAYNTAIEINPNYAEVYNNLGVALYYQGKLEEAIAAYNTAIEINPNYAEVYSNLG-FALS 139

Query: 292 ARGNVDEAIKLIEKAISIDKSCMFAYETLGTIEVQRGRLEEAVKCFNKALPLARDEAELS 351
            +G ++EAI    KAI I+ +  FAY  LG     +G+LEEA+  +NKA+ +  + AE  
Sbjct: 140 NQGKLEEAIAAYNKAIEINPNYAFAYIGLGIALYNQGKLEEAIAAYNKAIEINPNYAE-- 197

Query: 352 HIYS-LRDAAIAQMKVCE---RYNIKKKVSP 378
            +YS L  A   Q K+ E    YN   +++P
Sbjct: 198 -VYSNLGFALYNQGKLEEAIAAYNTAIEINP 227



 Score = 53.5 bits (127), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 59/260 (22%), Positives = 109/260 (41%), Gaps = 36/260 (13%)

Query: 257 DQEDFDGAEEYFNRSIRVDPENASLYVHRAMLMLQARGNVDEAIKLIEKAISIDKSCMFA 316
           ++ +F  AE  F + I+++P NA  Y +   + L+ +G ++EAI     AI I+ +    
Sbjct: 38  NEGNFTEAERIFRQVIKINPNNADAYRYLG-IALRNQGKLEEAIAAYNTAIEINPNYAEV 96

Query: 317 YETLGTIEVQRGRLEEAVKCFNKALPLARDEAELSHIYSLRDAAIAQMKVCERYNIKKKV 376
           Y  LG     +G+LEEA+  +N A+ +  + AE   +YS    A++     E     + +
Sbjct: 97  YNNLGVALYYQGKLEEAIAAYNTAIEINPNYAE---VYSNLGFALSNQGKLE-----EAI 148

Query: 377 SPRSQNITKNEKLAIKQLRENNDIIIRPADKGGKTVVMDKADYTQKMTSILNSNDYEIIP 436
           +  ++ I  N   A   +              G  + +      ++  +  N        
Sbjct: 149 AAYNKAIEINPNYAFAYI--------------GLGIALYNQGKLEEAIAAYN-------- 186

Query: 437 GDPTKTIEESEKYGNLENESG-QKHAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCL 495
               K IE +  Y  + +  G   +      +A A  + A +++PN A +Y   G     
Sbjct: 187 ----KAIEINPNYAEVYSNLGFALYNQGKLEEAIAAYNTAIEINPNDAFAYNNLGIALSN 242

Query: 496 FGQYEEALRNLDKTIALNPN 515
            G+ EEA+   +  I +NPN
Sbjct: 243 QGKLEEAIAAYNTAIEINPN 262


>gi|428319962|ref|YP_007117844.1| Tetratricopeptide TPR_1 repeat-containing protein [Oscillatoria
           nigro-viridis PCC 7112]
 gi|428243642|gb|AFZ09428.1| Tetratricopeptide TPR_1 repeat-containing protein [Oscillatoria
           nigro-viridis PCC 7112]
          Length = 346

 Score = 82.8 bits (203), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 55/227 (24%), Positives = 117/227 (51%), Gaps = 12/227 (5%)

Query: 117 AIEDLTQLVEDTSVDPKIKVNAHIKRAVVHLHAASDFTKAFADLDEAEKVDPNVADSYYQ 176
           AI+D  ++++    D K    A+  R +V+ +   D+ KA ADL +A  ++PN  ++Y  
Sbjct: 22  AIDDFDRILQLNPADAK----AYNNRGLVYYYM-KDYQKAIADLSQALDINPNFFEAYLN 76

Query: 177 RGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQRHFVVHKMIVPGDRERVEQSLKEFRN 236
           RG  +   G++E+A+ +L+  +A  PN H     R  V+  +         E++++++  
Sbjct: 77  RGNAWRHLGEHEKAIEDLNCALANKPNSHAIYNNRGLVLANL------GNYEEAIEDYNR 130

Query: 237 FVDTHSNVVEACTLFAQVLVDQEDFDGAEEYFNRSIRVDPENASLYVHRAMLMLQARGNV 296
            +  +SN  +      +      + + A E FN+++R++P+    Y++R +   Q  G+ 
Sbjct: 131 ALSINSNNYKTYYNRGRAYYLLGEKEAATENFNQTLRLNPKYIKAYINRGLCYHQL-GDN 189

Query: 297 DEAIKLIEKAISIDKSCMFAYETLGTIEVQRGRLEEAVKCFNKALPL 343
            +A+     A++ID   ++AY   G +  +  +++ A++ F+KA+ L
Sbjct: 190 TQAMADYNTALAIDPKNVYAYYNRGCVRYKLKQMQLAIEDFDKAVEL 236



 Score = 49.3 bits (116), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 44/170 (25%), Positives = 76/170 (44%), Gaps = 7/170 (4%)

Query: 174 YYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQRHFVVHKMIVPGDRERVEQSLKE 233
           +Y+RG      G YE A+ + D+ + LNP    A   R  V + M      +  ++++ +
Sbjct: 6   FYKRGLHSAKKGNYEAAIDDFDRILQLNPADAKAYNNRGLVYYYM------KDYQKAIAD 59

Query: 234 FRNFVDTHSNVVEACTLFAQVLVDQEDFDGAEEYFNRSIRVDPENASLYVHRAMLMLQAR 293
               +D + N  EA            + + A E  N ++   P + ++Y +R  L+L   
Sbjct: 60  LSQALDINPNFFEAYLNRGNAWRHLGEHEKAIEDLNCALANKPNSHAIYNNRG-LVLANL 118

Query: 294 GNVDEAIKLIEKAISIDKSCMFAYETLGTIEVQRGRLEEAVKCFNKALPL 343
           GN +EAI+   +A+SI+ +    Y   G      G  E A + FN+ L L
Sbjct: 119 GNYEEAIEDYNRALSINSNNYKTYYNRGRAYYLLGEKEAATENFNQTLRL 168



 Score = 46.2 bits (108), Expect = 0.041,   Method: Compositional matrix adjust.
 Identities = 22/63 (34%), Positives = 36/63 (57%)

Query: 464 DFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQR 523
           D+ KA ADL +A  ++PN  ++Y  RG  +   G++E+A+ +L+  +A  PN H     R
Sbjct: 52  DYQKAIADLSQALDINPNFFEAYLNRGNAWRHLGEHEKAIEDLNCALANKPNSHAIYNNR 111

Query: 524 HFV 526
             V
Sbjct: 112 GLV 114



 Score = 45.8 bits (107), Expect = 0.064,   Method: Compositional matrix adjust.
 Identities = 63/286 (22%), Positives = 112/286 (39%), Gaps = 43/286 (15%)

Query: 260 DFDGAEEYFNRSIRVDPENASLYVHRAMLMLQARGNVDEAIKLIEKAISIDKSCMFAYET 319
           +++ A + F+R ++++P +A  Y +R ++    + +  +AI  + +A+ I+ +   AY  
Sbjct: 18  NYEAAIDDFDRILQLNPADAKAYNNRGLVYYYMK-DYQKAIADLSQALDINPNFFEAYLN 76

Query: 320 LGTIEVQRGRLEEAVKCFNKALPLARDEAELSHIYSLRDAAIAQM----KVCERYNIKKK 375
            G      G  E+A++  N AL    ++     IY+ R   +A +    +  E YN    
Sbjct: 77  RGNAWRHLGEHEKAIEDLNCALA---NKPNSHAIYNNRGLVLANLGNYEEAIEDYNRALS 133

Query: 376 VSPRSQNITKNEKLAIKQLRENNDIIIRPADKGGKTVVMDKADYTQKMTSILNSNDYEII 435
           ++  +     N   A   L E                   K   T+     L  N     
Sbjct: 134 INSNNYKTYYNRGRAYYLLGE-------------------KEAATENFNQTLRLN----- 169

Query: 436 PGDPTKTIEESEKYGNLENESGQKHAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCL 495
           P      I     Y          H   D T+A AD + A  +DP    +YY RG +   
Sbjct: 170 PKYIKAYINRGLCY----------HQLGDNTQAMADYNTALAIDPKNVYAYYNRGCVRYK 219

Query: 496 FGQYEEALRNLDKTIALNPNFHVARAQRHFVWTSTLAELMAFSDEF 541
             Q + A+ + DK + L+PN+  A   R       L ++ A + +F
Sbjct: 220 LKQMQLAIEDFDKAVELDPNYVKAYLNRGLA-LYKLGDIAAANKDF 264


>gi|423064372|ref|ZP_17053162.1| tetratricopeptide TPR_2 [Arthrospira platensis C1]
 gi|406713615|gb|EKD08783.1| tetratricopeptide TPR_2 [Arthrospira platensis C1]
          Length = 608

 Score = 82.4 bits (202), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 89/404 (22%), Positives = 178/404 (44%), Gaps = 57/404 (14%)

Query: 155 KAFADLDEAEKVDPNVADS--YYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQRH 212
           +A A  D+A +++P   D   +  RG +     +Y++A+ + D+ +A+NPN      +R 
Sbjct: 216 EAIASFDKALEINPEPEDDGIWISRGNVLVKLNKYKDAITSFDRALAINPNDQQVSQKRE 275

Query: 213 FVVHKMIVPGDR-----------ERVEQSLKEFRNFVDTHSNVVEACTLFAQVLVDQEDF 261
            +++++    D              +E+SL+ F   V+   +      L    L     F
Sbjct: 276 DLLNQLNQLADNLFDQAMGLYGAGEMERSLELFNQLVEIKPDNFFMWYLRGLALASLGRF 335

Query: 262 DGAEEYFNRSIRVDPENASLYVHRAMLMLQARGNVDEAIKLIEKAISIDKSCMFAYETLG 321
           + A   +++++ VDP + S +  R   ++   G+ +EA++  +KA+ I+     A+  LG
Sbjct: 336 EEAITSYDKTLAVDPSDDSAWYSRGNALMNLGGH-EEAVQSYQKALEINPDHHEAWHNLG 394

Query: 322 TIEVQRGRLEEAVKCFNKALPLARDEAELSHIYSLRDAAIAQMKVCERYNIKKKVSPRSQ 381
                 GR +EA+ C++K+L +A  E + S +    D   A + +  RY        ++ 
Sbjct: 395 GALTSLGRYQEAIVCYDKSL-VANSEQDRSWL----DKGSALLNLG-RYEEAFASYEKAL 448

Query: 382 NITKNEKLAIKQLRENNDIIIRPADKGGKTVVMDKADYTQKMTSI-----LNSND----Y 432
            +  +  LA   L                 ++ D  +Y + +T       +NSN+    Y
Sbjct: 449 EVNPSNDLAWTAL---------------AGILADLREYQKALTFYEKALSINSNNGLTWY 493

Query: 433 E-----IIPGDPTKTIE--ESEKYGNLENESGQKHAAS------DFTKAFADLDEAEKVD 479
                 I  G   K ++  E+  + N ++E    +  +       + +A    D+A  + 
Sbjct: 494 NLGNTLIDLGSHEKAVQCYENALFINPDDEQAWYNLGNALAVLKRYGEAVKSYDKALAIK 553

Query: 480 PNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQR 523
           P+  ++++ RG     +G+YEEA+ + DK +A+NP+   AR  R
Sbjct: 554 PDKHEAWFNRGNALDDWGRYEEAIASFDKALAINPHNEAARHNR 597



 Score = 64.7 bits (156), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 56/226 (24%), Positives = 104/226 (46%), Gaps = 26/226 (11%)

Query: 146 HLHAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNP--- 202
           HL+ A +  ++    ++  ++ PN   ++Y RG      G+ EEA+ + DK + +NP   
Sbjct: 173 HLYEAGEVERSLELYNQVVELQPNQDSAWYGRGVALADLGRNEEAIASFDKALEINPEPE 232

Query: 203 --NFHVARAQRHFVVHK------------MIVPGDRERVEQSLKEFRNFVDTHSNVVEAC 248
                ++R      ++K             I P D ++V Q  ++  N ++  ++     
Sbjct: 233 DDGIWISRGNVLVKLNKYKDAITSFDRALAINPND-QQVSQKREDLLNQLNQLAD----- 286

Query: 249 TLFAQV--LVDQEDFDGAEEYFNRSIRVDPENASLYVHRAMLMLQARGNVDEAIKLIEKA 306
            LF Q   L    + + + E FN+ + + P+N  ++  R  L L + G  +EAI   +K 
Sbjct: 287 NLFDQAMGLYGAGEMERSLELFNQLVEIKPDNFFMWYLRG-LALASLGRFEEAITSYDKT 345

Query: 307 ISIDKSCMFAYETLGTIEVQRGRLEEAVKCFNKALPLARDEAELSH 352
           +++D S   A+ + G   +  G  EEAV+ + KAL +  D  E  H
Sbjct: 346 LAVDPSDDSAWYSRGNALMNLGGHEEAVQSYQKALEINPDHHEAWH 391



 Score = 64.7 bits (156), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 78/351 (22%), Positives = 152/351 (43%), Gaps = 40/351 (11%)

Query: 31  LKSFPNDPILQPDGLSNGVELTNGDTNESHELDLLSKAKRAFEHEDYLTAIRHCTEEIES 90
           + SF     + P+   +G+ ++ G+      L  L+K K A    D   AI    +++  
Sbjct: 218 IASFDKALEINPEPEDDGIWISRGNV-----LVKLNKYKDAITSFDRALAINPNDQQVSQ 272

Query: 91  TSSNHTKALARLL-----RATVYIFTSQSTKAIEDLTQLVEDTSVDPKIKVNAHIKRAVV 145
              +    L +L      +A       +  +++E   QLVE   + P      +++   +
Sbjct: 273 KREDLLNQLNQLADNLFDQAMGLYGAGEMERSLELFNQLVE---IKPDNFFMWYLRG--L 327

Query: 146 HLHAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFH 205
            L +   F +A    D+   VDP+   ++Y RG      G +EEA+++  K + +NP+ H
Sbjct: 328 ALASLGRFEEAITSYDKTLAVDPSDDSAWYSRGNALMNLGGHEEAVQSYQKALEINPDHH 387

Query: 206 VARAQRHFVVHKM------IVPGDRERVEQSLKEFRNFVDTHSNVVEACTLFAQVLVDQE 259
            A       +  +      IV  D+  V  S ++ R+++D  S            L++  
Sbjct: 388 EAWHNLGGALTSLGRYQEAIVCYDKSLVANSEQD-RSWLDKGS-----------ALLNLG 435

Query: 260 DFDGAEEYFNRSIRVDPENASLYVHRAMLMLQARGNVDEAIKLIEKAISIDKSCMFAYET 319
            ++ A   + +++ V+P N   +   A ++   R    +A+   EKA+SI+ +    +  
Sbjct: 436 RYEEAFASYEKALEVNPSNDLAWTALAGILADLR-EYQKALTFYEKALSINSNNGLTWYN 494

Query: 320 LGTIEVQRGRLEEAVKCFNKALPLARDEAELSHIYSLRDAAIAQMKVCERY 370
           LG   +  G  E+AV+C+  AL +  D+ +    Y+L +A    + V +RY
Sbjct: 495 LGNTLIDLGSHEKAVQCYENALFINPDDEQ--AWYNLGNA----LAVLKRY 539



 Score = 55.1 bits (131), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 58/233 (24%), Positives = 105/233 (45%), Gaps = 38/233 (16%)

Query: 294 GNVDEAIKLIEKAI--SIDKSCMFAYETLGTIEVQRGRLEEAVKCFNKAL-------PLA 344
           GN+DEAI   ++AI  S D      +     + +Q+ RL+EA+ CF KAL       P+ 
Sbjct: 23  GNIDEAIAACDQAIKKSDDNLAYSPWCKKAYLLIQQERLDEALSCFQKALNINSRFDPIW 82

Query: 345 RDEAELSHIYSLRDAAIAQMKVCERYNIKKKVSPRSQNITKNEKLAIKQLRENNDIIIRP 404
            D+A++    +  D AI      + Y+   K+ P S ++            E  D++++ 
Sbjct: 83  HDQAKILVQLNRIDEAI------KSYDQAIKIKPNSDSL----------WIEKGDLLVQ- 125

Query: 405 ADKGGKTVVMDKADYTQKMTSILNSNDYEI---IPGDPTKTIEESEKYGNLENESGQKHA 461
                +      AD  Q+   I N N++++   + G   +  E +E   NL  E    + 
Sbjct: 126 -----QNQTRLAADSYQRALEI-NPNNHQVSQKLEGLLNQLQELAE---NLLTEGNHLYE 176

Query: 462 ASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNP 514
           A +  ++    ++  ++ PN   ++Y RG      G+ EEA+ + DK + +NP
Sbjct: 177 AGEVERSLELYNQVVELQPNQDSAWYGRGVALADLGRNEEAIASFDKALEINP 229



 Score = 48.5 bits (114), Expect = 0.008,   Method: Compositional matrix adjust.
 Identities = 60/300 (20%), Positives = 126/300 (42%), Gaps = 38/300 (12%)

Query: 252 AQVLVDQEDFDGAEEYFNRSIRVDPENASLYVHRAMLMLQARGNVDEAIKLIEKAISIDK 311
           A +L+ QE  D A   F +++ ++     ++  +A +++Q    +DEAIK  ++AI I  
Sbjct: 52  AYLLIQQERLDEALSCFQKALNINSRFDPIWHDQAKILVQLN-RIDEAIKSYDQAIKIKP 110

Query: 312 SCMFAYETLGTIEVQRGRLEEAVKCFNKALPLARD--------EAELSHIYSLRDAAIAQ 363
           +    +   G + VQ+ +   A   + +AL +  +        E  L+ +  L +  + +
Sbjct: 111 NSDSLWIEKGDLLVQQNQTRLAADSYQRALEINPNNHQVSQKLEGLLNQLQELAENLLTE 170

Query: 364 M----------KVCERYNIKKKVSPRSQNITKNEKLAIKQLRENNDIII----------R 403
                      +  E YN   ++ P   +      +A+  L  N + I            
Sbjct: 171 GNHLYEAGEVERSLELYNQVVELQPNQDSAWYGRGVALADLGRNEEAIASFDKALEINPE 230

Query: 404 PADKG----GKTVVMDKADYTQKMTSI-----LNSNDYEIIPGDPTKTIEESEKYGNLEN 454
           P D G       V++    Y   +TS      +N ND ++         + ++   NL +
Sbjct: 231 PEDDGIWISRGNVLVKLNKYKDAITSFDRALAINPNDQQVSQKREDLLNQLNQLADNLFD 290

Query: 455 ESGQKHAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNP 514
           ++   + A +  ++    ++  ++ P+    +Y RG      G++EEA+ + DKT+A++P
Sbjct: 291 QAMGLYGAGEMERSLELFNQLVEIKPDNFFMWYLRGLALASLGRFEEAITSYDKTLAVDP 350



 Score = 44.7 bits (104), Expect = 0.13,   Method: Compositional matrix adjust.
 Identities = 94/498 (18%), Positives = 178/498 (35%), Gaps = 110/498 (22%)

Query: 127 DTSVDPKIKVNAHIKRAVVHLHAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQ 186
           ++  DP     A I   +V L+   +  K++   D+A K+ PN    + ++G +     Q
Sbjct: 75  NSRFDPIWHDQAKI---LVQLNRIDEAIKSY---DQAIKIKPNSDSLWIEKGDLLVQQNQ 128

Query: 187 YEEALRNLDKTIALNPNFHVARA-------QRHFVVHKMIVPGDR----ERVEQSLKEFR 235
              A  +  + + +NPN H           Q   +   ++  G+       VE+SL+ + 
Sbjct: 129 TRLAADSYQRALEINPNNHQVSQKLEGLLNQLQELAENLLTEGNHLYEAGEVERSLELYN 188

Query: 236 NFVDTHSNV-----------------VEACTLF-------------------AQVLVDQE 259
             V+   N                   EA   F                     VLV   
Sbjct: 189 QVVELQPNQDSAWYGRGVALADLGRNEEAIASFDKALEINPEPEDDGIWISRGNVLVKLN 248

Query: 260 DFDGAEEYFNRSIRVDPENASLYVHRAMLM----------------LQARGNVDEAIKLI 303
            +  A   F+R++ ++P +  +   R  L+                L   G ++ +++L 
Sbjct: 249 KYKDAITSFDRALAINPNDQQVSQKREDLLNQLNQLADNLFDQAMGLYGAGEMERSLELF 308

Query: 304 EKAISIDKSCMFAYETLGTIEVQRGRLEEAVKCFNKALPLARDEAELSHIYSLRDAAI-- 361
            + + I     F +   G      GR EEA+  ++K   LA D ++ S  YS  +A +  
Sbjct: 309 NQLVEIKPDNFFMWYLRGLALASLGRFEEAITSYDKT--LAVDPSDDSAWYSRGNALMNL 366

Query: 362 -AQMKVCERYNIKKKVSPRSQNITKNEKLAIKQLRENNDIIIRPADKGGKTVVMDKADYT 420
               +  + Y    +++P       N   A+  L    + I+   DK           + 
Sbjct: 367 GGHEEAVQSYQKALEINPDHHEAWHNLGGALTSLGRYQEAIV-CYDKSLVANSEQDRSWL 425

Query: 421 QKMTSILNSNDYE--------IIPGDPTKTIEESEKYGNLENESGQKHAASDFTKAFA-- 470
            K +++LN   YE         +  +P+  +  +   G L +    + A + + KA +  
Sbjct: 426 DKGSALLNLGRYEEAFASYEKALEVNPSNDLAWTALAGILADLREYQKALTFYEKALSIN 485

Query: 471 ---------------DLDEAEK----------VDPNVADSYYQRGQIYCLFGQYEEALRN 505
                          DL   EK          ++P+   ++Y  G    +  +Y EA+++
Sbjct: 486 SNNGLTWYNLGNTLIDLGSHEKAVQCYENALFINPDDEQAWYNLGNALAVLKRYGEAVKS 545

Query: 506 LDKTIALNPNFHVARAQR 523
            DK +A+ P+ H A   R
Sbjct: 546 YDKALAIKPDKHEAWFNR 563



 Score = 43.9 bits (102), Expect = 0.25,   Method: Compositional matrix adjust.
 Identities = 19/66 (28%), Positives = 37/66 (56%)

Query: 153 FTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQRH 212
           + +A    D+A  + P+  ++++ RG     +G+YEEA+ + DK +A+NP+   AR  R 
Sbjct: 539 YGEAVKSYDKALAIKPDKHEAWFNRGNALDDWGRYEEAIASFDKALAINPHNEAARHNRS 598

Query: 213 FVVHKM 218
             +  +
Sbjct: 599 VALRNL 604


>gi|238592086|ref|XP_002392802.1| hypothetical protein MPER_07575 [Moniliophthora perniciosa FA553]
 gi|215459356|gb|EEB93732.1| hypothetical protein MPER_07575 [Moniliophthora perniciosa FA553]
          Length = 359

 Score = 82.4 bits (202), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 79/303 (26%), Positives = 132/303 (43%), Gaps = 35/303 (11%)

Query: 8   QHAKEEISKRSFFKPSKQFIKTYLKSFPNDPILQ-PDGLSNGVELTNGDTNESHELDLLS 66
           + A++ +S R+   PS  FI  Y  +F   PI   P+  S G              + L+
Sbjct: 78  REAQQILSTRTPRLPSFTFISAYFAAFRPRPIPALPENPSTGD-------------NTLT 124

Query: 67  KAKRAFEHEDYLTAIRHCTEEIE-STSSNHTKALARLLRATVYIFTSQSTKAIEDLTQLV 125
            + +A E  DY  A+    E +E   S +  KA A  LR T    T     A  D  Q +
Sbjct: 125 LSLQALEAPDYPHALTLVNEALEQGISWDEGKAEALNLRGTFKFLTGDVDGAKADFNQSI 184

Query: 126 EDTSVDPKIKVNAHIKRAVVHLHAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFG 185
           E   + P     + +K A V++   SD  KAF   D+A + +PN  D YY RGQ+  +  
Sbjct: 185 E---LVPSF-TQSWVKIASVYMEQ-SDPAKAFECFDKAIEHNPNDPDIYYHRGQVLFIMN 239

Query: 186 QYEEALRNLDKTIALNPNFHVARAQRHFVVHKMIVPGDRERVEQSLKEFRNFVDTHSNVV 245
           Q+++A  N  K+  L+  F  +  Q     +K       +++  ++ +FR  +       
Sbjct: 240 QFKDAAENYTKSTELDDQFVFSHIQLAVAQYK------SDQLASAMAQFRRTMKAFPQRS 293

Query: 246 EACTLFAQVLVDQEDFDGAEEYFNRSIRVD---------PENASLYVHRAMLMLQARGNV 296
           E    + ++L+DQ+ F  A E F+R+I ++         P N    V++ + + Q   N+
Sbjct: 294 EPLNYYGELLLDQQRFPDAIEKFDRAIELEKQKASNSRNPPNVLPLVNKGLALYQWEQNI 353

Query: 297 DEA 299
             A
Sbjct: 354 GAA 356



 Score = 41.2 bits (95), Expect = 1.3,   Method: Compositional matrix adjust.
 Identities = 22/60 (36%), Positives = 33/60 (55%)

Query: 463 SDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQ 522
           SD  KAF   D+A + +PN  D YY RGQ+  +  Q+++A  N  K+  L+  F  +  Q
Sbjct: 205 SDPAKAFECFDKAIEHNPNDPDIYYHRGQVLFIMNQFKDAAENYTKSTELDDQFVFSHIQ 264


>gi|427727407|ref|YP_007073644.1| hypothetical protein Nos7524_0123 [Nostoc sp. PCC 7524]
 gi|427363326|gb|AFY46047.1| tetratricopeptide repeat protein [Nostoc sp. PCC 7524]
          Length = 516

 Score = 82.4 bits (202), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 101/431 (23%), Positives = 178/431 (41%), Gaps = 73/431 (16%)

Query: 151 SDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQ 210
            DF  A  D ++A +++ N+A +YY RG  +   G  E+A+ + D+ I +N +F    A+
Sbjct: 24  GDFEGAIKDYEQAIRINSNLAQAYYNRGMAFAKLGNLEDAIEDYDEAIYINEDF----AE 79

Query: 211 RHFVVHKMIVPGDRERVEQSLKEFRNFVDTHSNVVEA--CTLFAQVLVDQEDFDGAEEYF 268
            +F+   +      E+  ++L+++   +D +    EA  C   A+  +   D +GA   F
Sbjct: 80  AYFMRGNL--RAGLEKFSEALEDYNEAIDINPYFAEAYYCRSIARSYLG--DVEGAVNDF 135

Query: 269 NRSIRVDPENASLYVH---------------RAMLMLQARGNVDEAIKLIEKAISIDKSC 313
           N+ I  + +++S Y H                  L     G+++EAI+   +A++I    
Sbjct: 136 NQYI-FNKDDSSCYSHVNKHQNDSKLAEAFFNKGLYCAESGDLEEAIQNFNQALNIQSQY 194

Query: 314 MFAYETLGTIEVQRGRLEEAVKCFNKALPL-------------ARDEAELSHIYSLRDAA 360
             AY   G I    G L+EA+  FNK+L L             AR  AEL ++ +  +  
Sbjct: 195 TEAYYNRGLIYANLGDLKEAINDFNKSLVLQPKNFIAYYNRGIAR--AELGYLEAATEDF 252

Query: 361 IAQM----KVCERYNIKKKVSPRSQNITKNEKLAIKQLRENNDIIIRPADKGGKTVV--- 413
              +    K  E YN +  +  +  +I K    AIK  ++  +I    A+          
Sbjct: 253 TKSISINPKFAEAYNNRGVICRKLGDIKK----AIKDFKKAININSNYANAYHNLAFSYQ 308

Query: 414 ----MDKADYTQKMTSILNSNDYEIIP---------GDPTKTIEE-------SEKYGNLE 453
               M  A      T ++N ND +            GD    IE+       +  Y    
Sbjct: 309 QLRDMKGAIEAYTQTVLINPNDAQAYYNRGIVRADLGDTKGAIEDFNQSLHLNPNYAKSF 368

Query: 454 NESG-QKHAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIAL 512
           N  G  ++   D   A  D + A  + P   ++Y  RG      G ++ A+ +  + + +
Sbjct: 369 NYRGIVRNQLGDIEGAIEDFNRALYISPGFDEAYSNRGNTRKKLGDWKGAIEDYSQALRI 428

Query: 513 NPNFHVARAQR 523
           NPNF++A   R
Sbjct: 429 NPNFYIAYCNR 439



 Score = 64.7 bits (156), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 117/512 (22%), Positives = 196/512 (38%), Gaps = 74/512 (14%)

Query: 53  NGDTNESHELDLLSKAKRA-FEH--EDYLTAIRHCTEEIESTSSNHTKALARLLRATVYI 109
           N D +E +E  + S+AK   FE   +DY  AIR     +     N   A A+L       
Sbjct: 7   NNDADEFNERGM-SRAKLGDFEGAIKDYEQAIR-INSNLAQAYYNRGMAFAKL------- 57

Query: 110 FTSQSTKAIEDLTQLVEDTSVDPKIKVNAHIKRAVV---HLHAASD-FTKAFADLDEAEK 165
                  AIED          D  I +N     A     +L A  + F++A  D +EA  
Sbjct: 58  --GNLEDAIEDY---------DEAIYINEDFAEAYFMRGNLRAGLEKFSEALEDYNEAID 106

Query: 166 VDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPN-----FHVARAQR-----HFVV 215
           ++P  A++YY R       G  E A+ + ++ I  N +      HV + Q          
Sbjct: 107 INPYFAEAYYCRSIARSYLGDVEGAVNDFNQYI-FNKDDSSCYSHVNKHQNDSKLAEAFF 165

Query: 216 HKMIVPGDRERVEQSLKEFRNFVDTHSNVVEACTLFAQVLVDQEDFDGAEEYFNRSIRVD 275
           +K +   +   +E++++ F   ++  S   EA      +  +  D   A   FN+S+ + 
Sbjct: 166 NKGLYCAESGDLEEAIQNFNQALNIQSQYTEAYYNRGLIYANLGDLKEAINDFNKSLVLQ 225

Query: 276 PENASLYVHRAMLMLQARGNVDEAIKLIEKAISIDKSCMFAYETLGTIEVQRGRLEEAVK 335
           P+N   Y +R +   +  G ++ A +   K+ISI+     AY   G I  + G +++A+K
Sbjct: 226 PKNFIAYYNRGIARAEL-GYLEAATEDFTKSISINPKFAEAYNNRGVICRKLGDIKKAIK 284

Query: 336 CFNKALPLARDEAELSHIYSLRDAAIAQMK-VCERYNIKKKVSPRSQNITKNEKLAIKQL 394
            F KA+ +  + A   H  +     +  MK   E Y     ++P       N  +    L
Sbjct: 285 DFKKAININSNYANAYHNLAFSYQQLRDMKGAIEAYTQTVLINPNDAQAYYNRGIVRADL 344

Query: 395 RE--------NNDIIIRP----------------ADKGGKTVVMDKADYTQKM--TSILN 428
            +        N  + + P                 D  G     ++A Y       +  N
Sbjct: 345 GDTKGAIEDFNQSLHLNPNYAKSFNYRGIVRNQLGDIEGAIEDFNRALYISPGFDEAYSN 404

Query: 429 SNDYEIIPGDPTKTIEESEK--------YGNLENESGQKHAASDFTKAFADLDEAEKVDP 480
             +     GD    IE+  +        Y    N         +F KA  D ++A  ++ 
Sbjct: 405 RGNTRKKLGDWKGAIEDYSQALRINPNFYIAYCNRGTAYQYLGEFQKAIEDYEQAININC 464

Query: 481 NVADSYYQRGQIYCLFGQYEEALRNLDKTIAL 512
           N  ++YY RG IY L G    A+ +L K + L
Sbjct: 465 NFPEAYYNRGTIYKLLGNKVRAINDLIKAVEL 496


>gi|392411117|ref|YP_006447724.1| tetratricopeptide repeat protein [Desulfomonile tiedjei DSM 6799]
 gi|390624253|gb|AFM25460.1| tetratricopeptide repeat protein [Desulfomonile tiedjei DSM 6799]
          Length = 487

 Score = 82.4 bits (202), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 63/266 (23%), Positives = 123/266 (46%), Gaps = 15/266 (5%)

Query: 104 RATVYIFTSQSTKAIEDLTQLVEDTSVDPKIKVNAHIKRAVVHLHAASDFTKAFADLDEA 163
           R + Y    +  +AI+D  + +E   ++P   + A+  R   + H    F K+  D   A
Sbjct: 100 RGSAYYRLGEYDRAIKDYGRAIE---LNPGYGL-AYYNRGNAY-HGKGQFEKSIEDFSRA 154

Query: 164 EKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQRHFVVHKMIVPGD 223
            ++DP   D Y  RG  Y    + ++++ + D+ I L+PN+ +A A R    +  +  G+
Sbjct: 155 IQIDPRDKDVYNNRGWAYLQVNEIDKSIEDFDRAIQLDPNYVLAYANRG---NARLKSGN 211

Query: 224 RERVEQSLKEFRNFVDTHSNVVEACTLFAQVLVDQEDFDGAEEYFNRSIRVDPENASLYV 283
              VE ++++    ++ +     A        V +   D A   +N+++R+ P  A  Y 
Sbjct: 212 ---VEGAIQDLSRAIELNPEFATAYLQRGNAYVRKGLLDEALNDYNKAVRISPILADPYN 268

Query: 284 HRAMLMLQARGNVDEAIKLIEKAISIDKSCMFAYETLGTIEVQRGRLEEAVKCFNKALPL 343
           +R  +  + +GN+ +A++ + KA+S++     AY   G I    G   +A+  F++AL L
Sbjct: 269 NRGWVFFK-KGNIAQALRDVSKAVSLNPELSKAYTNRGWIHKSIGECPKALPDFDRALEL 327

Query: 344 ARDEAELSHIYSLRDAAIAQMKVCER 369
              +   + IY  R   +  M   +R
Sbjct: 328 ---DPSAAAIYVFRAECLLSMHQTDR 350



 Score = 80.1 bits (196), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 88/408 (21%), Positives = 163/408 (39%), Gaps = 89/408 (21%)

Query: 112 SQSTKAIEDLTQLVEDTSVDPKIKVNAHIKRAVVHLHAASDFTKAFADLDEAEKVDPNVA 171
           ++  KA++ L++ + +  ++  +      +R V H        +A  D  +A ++DP + 
Sbjct: 40  NEHAKAVDLLSKAIRNGVLNSDV----FFRRGVSH-ERLGKLNEAVQDYSKAIEIDPRME 94

Query: 172 DSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQRHFVVHKMIVPGDRERVEQSL 231
            +   RG  Y   G+Y+ A+++  + I LNP + +A   R    H               
Sbjct: 95  TALNNRGSAYYRLGEYDRAIKDYGRAIELNPGYGLAYYNRGNAYH--------------- 139

Query: 232 KEFRNFVDTHSNVVEACTLFAQVLVDQEDFDGAEEYFNRSIRVDPENASLYVHRAMLMLQ 291
                                     +  F+ + E F+R+I++DP +  +Y +R    LQ
Sbjct: 140 -------------------------GKGQFEKSIEDFSRAIQIDPRDKDVYNNRGWAYLQ 174

Query: 292 ARGNVDEAIKLIEKAISIDKSCMFAYETLGTIEVQRGRLEEAVKCFNKALPLARDEAELS 351
               +D++I+  ++AI +D + + AY   G   ++ G +E A++  ++A+ L     E +
Sbjct: 175 V-NEIDKSIEDFDRAIQLDPNYVLAYANRGNARLKSGNVEGAIQDLSRAIEL---NPEFA 230

Query: 352 HIYSLRDAAIAQMKVCER----YNIKKKVSPRSQNITKNEKLAIKQLRENNDIIIRPADK 407
             Y  R  A  +  + +     YN   ++SP                     I+  P + 
Sbjct: 231 TAYLQRGNAYVRKGLLDEALNDYNKAVRISP---------------------ILADPYNN 269

Query: 408 GGKTVVMDKADYTQKMTSILNSNDYEIIPGDPTKTIEESEKYGNLENESGQKHAA-SDFT 466
            G  V   K +  Q +  +  S    + P       E S+ Y N     G  H +  +  
Sbjct: 270 RG-WVFFKKGNIAQALRDV--SKAVSLNP-------ELSKAYTN----RGWIHKSIGECP 315

Query: 467 KAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNP 514
           KA  D D A ++DP+ A  Y  R +      Q + A  +LDK  AL+P
Sbjct: 316 KALPDFDRALELDPSAAAIYVFRAECLLSMHQTDRARSDLDKAYALDP 363



 Score = 73.2 bits (178), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 62/240 (25%), Positives = 112/240 (46%), Gaps = 12/240 (5%)

Query: 104 RATVYIFTSQSTKAIEDLTQLVEDTSVDPKIKVNAHIKRAVVHLHAASDFTKAFADLDEA 163
           R   Y+  ++  K+IED  + ++   +DP   V A+  R    L +  +   A  DL  A
Sbjct: 168 RGWAYLQVNEIDKSIEDFDRAIQ---LDPNY-VLAYANRGNARLKSG-NVEGAIQDLSRA 222

Query: 164 EKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQRHFVVHKMIVPGD 223
            +++P  A +Y QRG  Y   G  +EAL + +K + ++P        R +V  K      
Sbjct: 223 IELNPEFATAYLQRGNAYVRKGLLDEALNDYNKAVRISPILADPYNNRGWVFFK------ 276

Query: 224 RERVEQSLKEFRNFVDTHSNVVEACTLFAQVLVDQEDFDGAEEYFNRSIRVDPENASLYV 283
           +  + Q+L++    V  +  + +A T    +     +   A   F+R++ +DP  A++YV
Sbjct: 277 KGNIAQALRDVSKAVSLNPELSKAYTNRGWIHKSIGECPKALPDFDRALELDPSAAAIYV 336

Query: 284 HRAMLMLQARGNVDEAIKLIEKAISIDKSCMFAYETLGTIEVQRGRLEEAVKCFNKALPL 343
            RA  +L      D A   ++KA ++D +     ETLG+++   G    A++ F K + L
Sbjct: 337 FRAECLLSMH-QTDRARSDLDKAYALDPTNPEILETLGSLKEIAGDYSAALEMFTKLVDL 395



 Score = 61.2 bits (147), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 64/278 (23%), Positives = 123/278 (44%), Gaps = 24/278 (8%)

Query: 264 AEEYFNRSIRVDPENASLYVHRAMLMLQARGNVDEAIKLIEKAISIDKSCMFAYETLGTI 323
           A +  +++IR    N+ ++  R +   +  G ++EA++   KAI ID     A    G+ 
Sbjct: 45  AVDLLSKAIRNGVLNSDVFFRRGVSH-ERLGKLNEAVQDYSKAIEIDPRMETALNNRGSA 103

Query: 324 EVQRGRLEEAVKCFNKALPLARDEAELSHIYSL----RDAAI---AQM-KVCERYNIKKK 375
             + G  + A+K + +A+       EL+  Y L    R  A     Q  K  E ++   +
Sbjct: 104 YYRLGEYDRAIKDYGRAI-------ELNPGYGLAYYNRGNAYHGKGQFEKSIEDFSRAIQ 156

Query: 376 VSPRSQNITKNEKLAIKQLRENNDIIIRPADKGGKTVVMDK---ADYTQKMTSILNSNDY 432
           + PR +++  N   A  Q+ E    I +  +   + + +D      Y  +  + L S + 
Sbjct: 157 IDPRDKDVYNNRGWAYLQVNE----IDKSIEDFDRAIQLDPNYVLAYANRGNARLKSGNV 212

Query: 433 EIIPGDPTKTIEESEKYGNLENESGQKHAASDFT-KAFADLDEAEKVDPNVADSYYQRGQ 491
           E    D ++ IE + ++     + G  +       +A  D ++A ++ P +AD Y  RG 
Sbjct: 213 EGAIQDLSRAIELNPEFATAYLQRGNAYVRKGLLDEALNDYNKAVRISPILADPYNNRGW 272

Query: 492 IYCLFGQYEEALRNLDKTIALNPNFHVARAQRHFVWTS 529
           ++   G   +ALR++ K ++LNP    A   R ++  S
Sbjct: 273 VFFKKGNIAQALRDVSKAVSLNPELSKAYTNRGWIHKS 310



 Score = 53.5 bits (127), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 48/185 (25%), Positives = 79/185 (42%), Gaps = 13/185 (7%)

Query: 104 RATVYIFTSQSTKAIEDLTQLVEDTSVDPKIKVNAHIKRAVVHLHAASDFTKAFADLDEA 163
           R  V+       +A+ D+++ V   S++P++   A+  R  +H  +  +  KA  D D A
Sbjct: 270 RGWVFFKKGNIAQALRDVSKAV---SLNPELS-KAYTNRGWIH-KSIGECPKALPDFDRA 324

Query: 164 EKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNP-NFHVARAQRHFVVHKMIVPG 222
            ++DP+ A  Y  R +      Q + A  +LDK  AL+P N  +             + G
Sbjct: 325 LELDPSAAAIYVFRAECLLSMHQTDRARSDLDKAYALDPTNPEILETLGSL----KEIAG 380

Query: 223 DRERVEQSLKEFRNFVDTHSNVVEACTLFAQVLVDQEDFDGAEEYFNRSIRVDPENASLY 282
           D      +L+ F   VD   N   A       L        A E F R+I++DP+N   Y
Sbjct: 381 D---YSAALEMFTKLVDLRPNDSAAHVDLGMALGKSGSLARAVEEFTRAIQLDPQNREAY 437

Query: 283 VHRAM 287
           + R +
Sbjct: 438 LRRGV 442


>gi|310778588|ref|YP_003966921.1| hypothetical protein [Ilyobacter polytropus DSM 2926]
 gi|309747911|gb|ADO82573.1| TPR repeat-containing protein [Ilyobacter polytropus DSM 2926]
          Length = 363

 Score = 82.0 bits (201), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 89/355 (25%), Positives = 143/355 (40%), Gaps = 48/355 (13%)

Query: 165 KVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQRHFVVHKMIVPGDR 224
           K DPN    YY RG I    G    + ++ DKTI L+P F  A   R       I  GD 
Sbjct: 35  KSDPNEQFEYYNRGLIKYFSGDIIGSRKDYDKTIQLDPEFKYAYDNRG------ISKGDL 88

Query: 225 ERVEQSLKEFRNFVDTHSNVVEACTLFAQVLVDQEDFDGAEEYFNRSIRVDPENASLYVH 284
              E ++++F   ++     + A +          D +GA   ++++I+++P+    Y +
Sbjct: 89  GDFEGAVEDFDKAIELDPKFIYAYSNRGFTKTKLGDLEGAIADYDKAIKLNPKFKLAYFN 148

Query: 285 RAMLMLQARGNVDEAIKLIEKAISIDKSCMFAYETLGTIEVQRGRLEEAVKCFNKALPLA 344
           R      +  +   AI    K I+ID     AY   G  + + G  + +++ +NKA+   
Sbjct: 149 RGNAKYFSD-DYKGAINDYSKVINIDPKSQVAYNNRGLAKWELGEYKSSIEDYNKAI--- 204

Query: 345 RDEAELSHIYSLRDAAIAQMKVCERYNIKKKVSPRSQNITKNEKLAIKQLRENNDIIIRP 404
                                   R + K K+S  ++  TK       QL++    I   
Sbjct: 205 ------------------------RLDPKYKLSYNNRGFTK------AQLKDYKGAI--- 231

Query: 405 ADKGGKTVVMDK---ADYTQKMTSILNSNDYEIIPGDPTKTIEESEKYGNLENESGQ-KH 460
            +   KT+ +D      Y+ +  + L   DY     D  K IE    Y       G  K 
Sbjct: 232 -NDYNKTIELDPDFVLAYSNRGMAKLKLQDYNGAMEDYNKVIESDPDYEVAYYRRGLVKT 290

Query: 461 AASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPN 515
              D+  A  D ++  K+DPN   +YY RG I    G ++ AL +  KTI L+PN
Sbjct: 291 KLRDYHGALEDYNKVIKLDPNFKQAYYNRGIIKTKLGDFDGALEDFGKTIKLDPN 345



 Score = 58.5 bits (140), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 62/264 (23%), Positives = 109/264 (41%), Gaps = 29/264 (10%)

Query: 91  TSSNHTKALAR---------LLRATVYIFTSQSTKAIEDLTQLVEDTSVDPKIKVNAHIK 141
           TS NH++ + +           R  +  F+     + +D  + ++   +DP+ K  A+  
Sbjct: 25  TSENHSEYMIKSDPNEQFEYYNRGLIKYFSGDIIGSRKDYDKTIQ---LDPEFKY-AYDN 80

Query: 142 RAVVHLHAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALN 201
           R +       DF  A  D D+A ++DP    +Y  RG      G  E A+ + DK I LN
Sbjct: 81  RGISK-GDLGDFEGAVEDFDKAIELDPKFIYAYSNRGFTKTKLGDLEGAIADYDKAIKLN 139

Query: 202 PNFHVARAQR----HFVVHKMIVPGDRERVEQSLKEFRNFVDTHSNVVEACTLFAQVLVD 257
           P F +A   R    +F         D  +V          +D  S V       A+  + 
Sbjct: 140 PKFKLAYFNRGNAKYFSDDYKGAINDYSKVIN--------IDPKSQVAYNNRGLAKWELG 191

Query: 258 QEDFDGAEEYFNRSIRVDPENASLYVHRAMLMLQARGNVDEAIKLIEKAISIDKSCMFAY 317
           +  +  + E +N++IR+DP+    Y +R     Q + +   AI    K I +D   + AY
Sbjct: 192 E--YKSSIEDYNKAIRLDPKYKLSYNNRGFTKAQLK-DYKGAINDYNKTIELDPDFVLAY 248

Query: 318 ETLGTIEVQRGRLEEAVKCFNKAL 341
              G  +++      A++ +NK +
Sbjct: 249 SNRGMAKLKLQDYNGAMEDYNKVI 272



 Score = 55.1 bits (131), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 48/155 (30%), Positives = 71/155 (45%), Gaps = 14/155 (9%)

Query: 55  DTNESHELD---LLSKAKRAF---EHEDYLTAIRHCTEEIESTSSNHTKALARLLRATVY 108
           D N++  LD    LS   R F   + +DY  AI    + IE         LA   R    
Sbjct: 199 DYNKAIRLDPKYKLSYNNRGFTKAQLKDYKGAINDYNKTIELDPDF---VLAYSNRGMAK 255

Query: 109 IFTSQSTKAIEDLTQLVEDTSVDPKIKVNAHIKRAVVHLHAASDFTKAFADLDEAEKVDP 168
           +       A+ED  +++E    DP  +V A+ +R +V      D+  A  D ++  K+DP
Sbjct: 256 LKLQDYNGAMEDYNKVIES---DPDYEV-AYYRRGLVKTKL-RDYHGALEDYNKVIKLDP 310

Query: 169 NVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPN 203
           N   +YY RG I    G ++ AL +  KTI L+PN
Sbjct: 311 NFKQAYYNRGIIKTKLGDFDGALEDFGKTIKLDPN 345



 Score = 43.5 bits (101), Expect = 0.26,   Method: Compositional matrix adjust.
 Identities = 29/86 (33%), Positives = 39/86 (45%), Gaps = 1/86 (1%)

Query: 438 DPTKTIEESEKYGNLENESGQKHAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFG 497
           D T  ++   KY   +N    K    DF  A  D D+A ++DP    +Y  RG      G
Sbjct: 65  DKTIQLDPEFKYA-YDNRGISKGDLGDFEGAVEDFDKAIELDPKFIYAYSNRGFTKTKLG 123

Query: 498 QYEEALRNLDKTIALNPNFHVARAQR 523
             E A+ + DK I LNP F +A   R
Sbjct: 124 DLEGAIADYDKAIKLNPKFKLAYFNR 149



 Score = 40.0 bits (92), Expect = 3.5,   Method: Compositional matrix adjust.
 Identities = 29/95 (30%), Positives = 43/95 (45%), Gaps = 7/95 (7%)

Query: 434 IIPGDPTKTIEESEKYGNLENESGQKHAASDFTKAFADLDEAEKVDPNVADSYYQRGQIY 493
           +I  DP    E+ E Y    N    K+ + D   +  D D+  ++DP    +Y  RG   
Sbjct: 33  MIKSDPN---EQFEYY----NRGLIKYFSGDIIGSRKDYDKTIQLDPEFKYAYDNRGISK 85

Query: 494 CLFGQYEEALRNLDKTIALNPNFHVARAQRHFVWT 528
              G +E A+ + DK I L+P F  A + R F  T
Sbjct: 86  GDLGDFEGAVEDFDKAIELDPKFIYAYSNRGFTKT 120


>gi|428320555|ref|YP_007118437.1| Tetratricopeptide TPR_1 repeat-containing protein [Oscillatoria
           nigro-viridis PCC 7112]
 gi|428244235|gb|AFZ10021.1| Tetratricopeptide TPR_1 repeat-containing protein [Oscillatoria
           nigro-viridis PCC 7112]
          Length = 838

 Score = 82.0 bits (201), Expect = 8e-13,   Method: Compositional matrix adjust.
 Identities = 91/417 (21%), Positives = 169/417 (40%), Gaps = 64/417 (15%)

Query: 117 AIEDLTQLVED-TSVDPKIKVNAHIKRAV----VHLHAASDFTKAFADLDEAEKVDPNVA 171
           A++DL +  E   S D  +K    +  A     + L+      +A A  D+A ++ P++ 
Sbjct: 288 ALDDLGRFEEAIASYDKALKFKPDLHEAWYIRGLALYNLGRREEAIASWDKALEIKPDLH 347

Query: 172 DSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQRHFVVHKMIVPGDRERVEQSL 231
           + +Y RG      G++EEAL + +K + L P++H A   R  ++H +       R E++L
Sbjct: 348 EVWYNRGYALDDLGRFEEALTSYNKALELKPDYHEAWNNRGLLLHNL------GRFEEAL 401

Query: 232 KEFRNFVDTHSNVVEACTLFAQVLVDQEDFDGAEEYFNRSIRVDPENASLYVHRAMLMLQ 291
                                               +N+++ + P+    + +R    L 
Sbjct: 402 TS----------------------------------YNKALELKPDYHEAWNNRGN-ALD 426

Query: 292 ARGNVDEAIKLIEKAISIDKSCMFAYETLGTIEVQRGRLEEAVKCFNKALPLARDEAELS 351
             G ++EAI   +KA+ +      A+   G      GRLEEA+  ++KAL +  D  E  
Sbjct: 427 KLGRIEEAIASYDKALELKPDYHEAWNNRGNALRNLGRLEEAIASYDKALEIKPDYHEAW 486

Query: 352 HIYSLRDAAIAQMKVCERYNIKKKVSPRSQNITKNEKLAIKQLRENNDIIIRPADKGGKT 411
           +   L    + +++    Y+   ++ P       N   A+  L       I  A      
Sbjct: 487 NNRVLLLDNLGRIEAIASYDKALEIKPDDHEAWNNRGYALVNLGR-----IEEAIASWDK 541

Query: 412 VVMDKADYTQ----KMTSILNSNDYEIIPGDPTKTIEESEKYGNLENESGQKHAASDFT- 466
            +  K DY +    +  +++N    E    D   + +E+ K+    +E+      +    
Sbjct: 542 ALEIKPDYHEAWYNRGVALVNLGRRE----DAIASWDEALKFKPDLHEAWYNRGVALVNL 597

Query: 467 ----KAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVA 519
                A A  DEA K  P++ +++Y RG      G+ E+A+ +  K + L P+FH A
Sbjct: 598 GRREDAIASWDEALKFKPDLHEAWYNRGLALVNLGRREDAIASYGKALKLKPDFHEA 654



 Score = 79.3 bits (194), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 85/377 (22%), Positives = 153/377 (40%), Gaps = 48/377 (12%)

Query: 151 SDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQ 210
            DF  A A  D+A +  PN+ +++Y RG      G++EEA+ + DK + + P+ H     
Sbjct: 157 GDFEDAIASYDKALEFKPNLHEAWYIRGLALGNLGRFEEAIASCDKALEIKPDLHEVWNN 216

Query: 211 RHFVVHKMIVPGDRERVEQSLKEFRNFVDTHSNVVEACTLFAQVLVDQEDFDGAEEYFNR 270
           R   +       D  R+E ++  +   +    +  EA +     LV       A   +++
Sbjct: 217 RGRALD------DLGRLEDAIASYDKALKFKPDKHEAWSSRGLALVKLGRLQDAIASYDK 270

Query: 271 SIRVDPENASLYVHRAMLMLQARGNVDEAIKLIEKAISIDKSCMFAYETLGTIEVQRGRL 330
           +++  P+   ++  R  L L   G  +EAI   +KA+        A+   G      GR 
Sbjct: 271 ALKFKPDKHEVWNIRG-LALDDLGRFEEAIASYDKALKFKPDLHEAWYIRGLALYNLGRR 329

Query: 331 EEAVKCFNKALPLARDEAELSHIYSLRDAAIAQMKVCER----YNIKKKVSPRSQNITKN 386
           EEA+  ++KAL +  D   L  ++  R  A+  +   E     YN   ++ P       N
Sbjct: 330 EEAIASWDKALEIKPD---LHEVWYNRGYALDDLGRFEEALTSYNKALELKPDYHEAWNN 386

Query: 387 EKLAIKQLRENNDIIIRPADKGGKTVVMDKADYTQKMTSILNSNDYEIIPGDPTKTIEES 446
             L +  L    + +        K + + K DY +   +  N+ D               
Sbjct: 387 RGLLLHNLGRFEEALTSY----NKALEL-KPDYHEAWNNRGNALD--------------- 426

Query: 447 EKYGNLENESGQKHAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNL 506
            K G +E             +A A  D+A ++ P+  +++  RG      G+ EEA+ + 
Sbjct: 427 -KLGRIE-------------EAIASYDKALELKPDYHEAWNNRGNALRNLGRLEEAIASY 472

Query: 507 DKTIALNPNFHVARAQR 523
           DK + + P++H A   R
Sbjct: 473 DKALEIKPDYHEAWNNR 489



 Score = 78.2 bits (191), Expect = 9e-12,   Method: Compositional matrix adjust.
 Identities = 63/253 (24%), Positives = 116/253 (45%), Gaps = 11/253 (4%)

Query: 143 AVVHLHAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNP 202
           A+V+L    D   A A  DEA K  P++ +++Y RG      G+ E+A+ +  K + L P
Sbjct: 593 ALVNLGRRED---AIASWDEALKFKPDLHEAWYNRGLALVNLGRREDAIASYGKALKLKP 649

Query: 203 NFHVARAQRHFVVHKMIVPGDRERVEQSLKEFRNFVDTHSNVVEACTLFAQVLVDQEDFD 262
           +FH A      V+H      D  R+E ++  +   ++   +  EA      VL +   F+
Sbjct: 650 DFHEAWYNLGVVLH------DLGRIEDAIASYDKALEIKPDYHEAWFNQGVVLHNLGRFE 703

Query: 263 GAEEYFNRSIRVDPENASLYVHRAMLMLQARGNVDEAIKLIEKAISIDKSCMFAYETLGT 322
            A   F ++++   +    +  R + ++   G  +EAI   ++A+        A+   G 
Sbjct: 704 EAIASFGKALKFKADYHEAWYSRGLALVNL-GRFEEAITSWDEALKFKPDKHEAWYIRGL 762

Query: 323 IEVQRGRLEEAVKCFNKALPLARDEAELSHIYSLRDAAIAQMK-VCERYNIKKKVSPRSQ 381
           +    GR EEA+  ++KAL    D+ E  +I  L    + ++K     Y+   ++ P   
Sbjct: 763 VLYNLGRFEEAIASYDKALKFKPDKHEAWYIRGLALYNLGRIKEAIASYDKALEIKPDDH 822

Query: 382 NITKNEKLAIKQL 394
             +KN  +A+K+L
Sbjct: 823 LASKNRTIALKKL 835



 Score = 76.3 bits (186), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 86/391 (21%), Positives = 163/391 (41%), Gaps = 29/391 (7%)

Query: 147 LHAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHV 206
           LH    F +A    ++A ++ P+  +++  RG      G+ EEA+ + DK + L P++H 
Sbjct: 391 LHNLGRFEEALTSYNKALELKPDYHEAWNNRGNALDKLGRIEEAIASYDKALELKPDYHE 450

Query: 207 ARAQRHFVVHKMIVPGDRERVEQSLKEFRNFVDTHSNVVEACTLFAQVLVDQEDFDGAEE 266
           A   R   +  +       R+E+++  +   ++   +  EA      +L +    +    
Sbjct: 451 AWNNRGNALRNL------GRLEEAIASYDKALEIKPDYHEAWNNRVLLLDNLGRIEAIAS 504

Query: 267 YFNRSIRVDPENASLYVHRAMLMLQARGNVDEAIKLIEKAISIDKSCMFAYETLGTIEVQ 326
           Y ++++ + P++   + +R   ++   G ++EAI   +KA+ I      A+   G   V 
Sbjct: 505 Y-DKALEIKPDDHEAWNNRGYALVNL-GRIEEAIASWDKALEIKPDYHEAWYNRGVALVN 562

Query: 327 RGRLEEAVKCFNKALPLARDEAELSHIYSLRDAAIAQMKVCE----RYNIKKKVSPRSQN 382
            GR E+A+  +++AL    D   L   +  R  A+  +   E     ++   K  P    
Sbjct: 563 LGRREDAIASWDEALKFKPD---LHEAWYNRGVALVNLGRREDAIASWDEALKFKPDLHE 619

Query: 383 ITKNEKLAIKQLRENNDIIIRPADKGGKTVVMDKADYTQKMTSI------LNSNDYEIIP 436
              N  LA+  L    D I       GK + + K D+ +   ++      L   +  I  
Sbjct: 620 AWYNRGLALVNLGRREDAIASY----GKALKL-KPDFHEAWYNLGVVLHDLGRIEDAIAS 674

Query: 437 GDPTKTIEESEKYGNLE-NESGQKHAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCL 495
            D  K +E    Y     N+    H    F +A A   +A K   +  +++Y RG     
Sbjct: 675 YD--KALEIKPDYHEAWFNQGVVLHNLGRFEEAIASFGKALKFKADYHEAWYSRGLALVN 732

Query: 496 FGQYEEALRNLDKTIALNPNFHVARAQRHFV 526
            G++EEA+ + D+ +   P+ H A   R  V
Sbjct: 733 LGRFEEAITSWDEALKFKPDKHEAWYIRGLV 763



 Score = 68.9 bits (167), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 86/407 (21%), Positives = 171/407 (42%), Gaps = 49/407 (12%)

Query: 155 KAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQRHFV 214
           +A A  D+A ++ P+  +++  RG      G+ EEA+ + DK + + P++H A   R  +
Sbjct: 433 EAIASYDKALELKPDYHEAWNNRGNALRNLGRLEEAIASYDKALEIKPDYHEAWNNRVLL 492

Query: 215 VHKM--------------IVPGDRE-------------RVEQSLKEFRNFVDTHSNVVEA 247
           +  +              I P D E             R+E+++  +   ++   +  EA
Sbjct: 493 LDNLGRIEAIASYDKALEIKPDDHEAWNNRGYALVNLGRIEEAIASWDKALEIKPDYHEA 552

Query: 248 CTLFAQVLVDQEDFDGAEEYFNRSIRVDPENASLYVHRAMLMLQARGNVDEAIKLIEKAI 307
                  LV+    + A   ++ +++  P+    + +R + ++   G  ++AI   ++A+
Sbjct: 553 WYNRGVALVNLGRREDAIASWDEALKFKPDLHEAWYNRGVALVNL-GRREDAIASWDEAL 611

Query: 308 SIDKSCMFAYETLGTIEVQRGRLEEAVKCFNKALPLARD--EAELSHIYSLRDAAIAQMK 365
                   A+   G   V  GR E+A+  + KAL L  D  EA  +    L D    +  
Sbjct: 612 KFKPDLHEAWYNRGLALVNLGRREDAIASYGKALKLKPDFHEAWYNLGVVLHDLGRIEDA 671

Query: 366 VCERYNIKKKVSPRSQNITKNEKLAIKQLRENNDIIIRPADKGGKTVVMDKADYTQKMTS 425
           +   Y+   ++ P       N+ + +  L    + I       GK +   KADY +   S
Sbjct: 672 IAS-YDKALEIKPDYHEAWFNQGVVLHNLGRFEEAIA----SFGKALKF-KADYHEAWYS 725

Query: 426 ----ILNSNDYEIIPGDPTKTIEESEKYGNLENESGQKHAA-----SDFTKAFADLDEAE 476
               ++N   +E    +   + +E+ K+   ++E+             F +A A  D+A 
Sbjct: 726 RGLALVNLGRFE----EAITSWDEALKFKPDKHEAWYIRGLVLYNLGRFEEAIASYDKAL 781

Query: 477 KVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQR 523
           K  P+  +++Y RG      G+ +EA+ + DK + + P+ H+A   R
Sbjct: 782 KFKPDKHEAWYIRGLALYNLGRIKEAIASYDKALEIKPDDHLASKNR 828


>gi|390438794|ref|ZP_10227233.1| Tetratricopeptide repeat protein [Microcystis sp. T1-4]
 gi|389837800|emb|CCI31357.1| Tetratricopeptide repeat protein [Microcystis sp. T1-4]
          Length = 1271

 Score = 82.0 bits (201), Expect = 8e-13,   Method: Compositional matrix adjust.
 Identities = 104/421 (24%), Positives = 188/421 (44%), Gaps = 34/421 (8%)

Query: 103  LRATVYIFTSQSTKAIEDLTQLVEDTSVDPKIKVNAHIKRAVVHLHAASDFTKAFADLDE 162
            +R   YIF S+   AI DLT+ +E   ++P   V A+  R   +      +  A AD  +
Sbjct: 778  MRGIFYIFQSEEELAIADLTKEIE---INP-YSVVAYSMRGFAY-EKWQKWDLALADYQK 832

Query: 163  AEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQRHFVVHKMIVPG 222
              ++DPN    Y  RG+ Y    +++ AL + +K + L+PN       R  +        
Sbjct: 833  GIELDPNSGLGYETRGRFYTERQEWDLALADFNKALELDPNSGNGYQLRGNLYI------ 886

Query: 223  DRERVEQSLKEFRNFVDTH--SNVVEACTLFAQVLVDQEDFDGAEEYFNRSIRVDPENAS 280
            ++++ + +L +F   ++    S+ V    ++ Q    Q+ ++ A   FN++I + P    
Sbjct: 887  NQKKWDLALADFNKAIELGYFSSYVNRGNVYFQ----QQKWELALADFNKAIELSPYPEF 942

Query: 281  LYVHRAMLMLQARGNVDEAIKLIEKAISIDKSCMFAYETLGTIEVQRGRLEEAVKCFNKA 340
             Y  RA+L    R   D A+  + +AI I+     AY   G I   + + + A+  +NKA
Sbjct: 943  AYGARAILYWD-RKEWDLALTDLSQAIRINPYFELAYRYRGDIYRDQNQFDLALADYNKA 1001

Query: 341  LPLARDEAELSH----IYSLR---DAAIAQMKVCERYNIKKKVSPRSQNITKNEKLAIKQ 393
            + L  ++AEL +    IY  +   D A+A       Y+   ++ P+  +    ++  I +
Sbjct: 1002 IKLNSNDAELYYNRGEIYRQQQKSDIALAD------YSRAIELDPKYWSAYL-QRYIIYE 1054

Query: 394  LRENNDIIIRPADKGGKTVVMDKADYTQKMTSILNSNDYEIIPGDPTKTIEESEKYGNLE 453
             ++  D+ I    K  +      A Y  + +  L   ++++   D  K IE      +  
Sbjct: 1055 QQKKWDLAIADITKVIEIKQFPGA-YFVRGSKYLEWQEWDLALADFNKAIELKPDNASFY 1113

Query: 454  NESG-QKHAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIAL 512
            +  G   +    +  A AD + A  +DPN  DSY  RG IY    +Y EAL++  K + L
Sbjct: 1114 STRGILYYQTQKWDLALADFNRAIALDPNRKDSYSFRGDIYKREKRYSEALQDYQKLLEL 1173

Query: 513  N 513
            +
Sbjct: 1174 D 1174



 Score = 76.3 bits (186), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 115/524 (21%), Positives = 206/524 (39%), Gaps = 87/524 (16%)

Query: 67   KAKRAFEHEDYLTAIRHCTEEIESTSSNHTKALARLLRATVYIFTSQSTKAIEDLTQLVE 126
            KA+ A E  D + A     E+    S  H + L    +   Y   +QS KAI+   Q ++
Sbjct: 578  KAREALEALDQVLATLPAREK---GSEFHGEILN--YQGVFYEQMNQSEKAIDSFEQAIK 632

Query: 127  DTSVDPKIKVNAHIKRAVVHLHAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQ 186
             +  +P      +       L     + +A A ++ A ++ P  +  Y  RG  Y    +
Sbjct: 633  ISPQNPN-----YYNSLSSALQNVKRYDRALAAINRAIEIAPR-SSWYSNRGNTYKDIKK 686

Query: 187  YEEALRNLDKTIALNPN---FHVARAQRHFVVHKMIVPGDRERVEQSLKEFRNFVDTHSN 243
            ++ AL + ++ + LNPN    ++ARA          V  +R+  + +L ++   ++  +N
Sbjct: 687  WDLALADYNQALTLNPNNSRAYIARAD---------VYEERKEWDLALADYNRAIEIDAN 737

Query: 244  VVEACTLFAQVLVDQEDFDGAEEYFNRSIRVDPENASLYVHRAMLML------------- 290
               A         D++ +D A   FN++I +DP +   Y  R +  +             
Sbjct: 738  FAAAYISRGSFYTDRKQWDLALADFNKAITIDPNDPKSYGMRGIFYIFQSEEELAIADLT 797

Query: 291  -------------QARG-------NVDEAIKLIEKAISIDKSCMFAYETLGTIEVQRGRL 330
                           RG         D A+   +K I +D +    YET G    +R   
Sbjct: 798  KEIEINPYSVVAYSMRGFAYEKWQKWDLALADYQKGIELDPNSGLGYETRGRFYTERQEW 857

Query: 331  EEAVKCFNKALPLARDEAELSHIYSLR----------DAAIAQMKVCERYNIKKKVSPRS 380
            + A+  FNKAL L   +    + Y LR          D A+A                R 
Sbjct: 858  DLALADFNKALEL---DPNSGNGYQLRGNLYINQKKWDLALADFNKAIELGYFSSYVNRG 914

Query: 381  QNITKNEKLAIKQLRENNDIIIRPADK---GGKTVV-MDKADYTQKMTSILNSNDYEIIP 436
                + +K  +     N  I + P  +   G + ++  D+ ++   +T +  S    I P
Sbjct: 915  NVYFQQQKWELALADFNKAIELSPYPEFAYGARAILYWDRKEWDLALTDL--SQAIRINP 972

Query: 437  GDPTKTIEESEKY-GNLENESGQKHAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCL 495
                   E + +Y G++  +  Q      F  A AD ++A K++ N A+ YY RG+IY  
Sbjct: 973  -----YFELAYRYRGDIYRDQNQ------FDLALADYNKAIKLNSNDAELYYNRGEIYRQ 1021

Query: 496  FGQYEEALRNLDKTIALNPNFHVARAQRHFVWTSTLAELMAFSD 539
              + + AL +  + I L+P +  A  QR+ ++       +A +D
Sbjct: 1022 QQKSDIALADYSRAIELDPKYWSAYLQRYIIYEQQKKWDLAIAD 1065



 Score = 72.0 bits (175), Expect = 8e-10,   Method: Compositional matrix adjust.
 Identities = 75/308 (24%), Positives = 144/308 (46%), Gaps = 22/308 (7%)

Query: 50   ELTNGDTNESHELDLLS----KAKRAFEHEDYLTAIRHCTEEIESTSSNHTKALARLLRA 105
            +L   D N++ EL   S    +    F+ + +  A+    + IE +        A   RA
Sbjct: 892  DLALADFNKAIELGYFSSYVNRGNVYFQQQKWELALADFNKAIELSPYPE---FAYGARA 948

Query: 106  TVYIFTSQSTKAIEDLTQLVEDTSVDPKIKVNAHIKRAVVHLHAASDFTKAFADLDEAEK 165
             +Y    +   A+ DL+Q +    ++P  ++ A+  R  ++    + F  A AD ++A K
Sbjct: 949  ILYWDRKEWDLALTDLSQAIR---INPYFEL-AYRYRGDIY-RDQNQFDLALADYNKAIK 1003

Query: 166  VDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQRHFVVHKMIVPGDRE 225
            ++ N A+ YY RG+IY    + + AL +  + I L+P +  A  QR+ +  +      ++
Sbjct: 1004 LNSNDAELYYNRGEIYRQQQKSDIALADYSRAIELDPKYWSAYLQRYIIYEQ------QK 1057

Query: 226  RVEQSLKEFRNFVDTHSNVVEACTLFAQVLVDQEDFDGAEEYFNRSIRVDPENASLYVHR 285
            + + ++ +    ++       A  +     ++ +++D A   FN++I + P+NAS Y  R
Sbjct: 1058 KWDLAIADITKVIEIK-QFPGAYFVRGSKYLEWQEWDLALADFNKAIELKPDNASFYSTR 1116

Query: 286  AMLMLQARGNVDEAIKLIEKAISIDKSCMFAYETLGTIEVQRGRLEEAVKCFNKALPLAR 345
             +L  Q +   D A+    +AI++D +   +Y   G I  +  R  EA++ + K L L  
Sbjct: 1117 GILYYQTQ-KWDLALADFNRAIALDPNRKDSYSFRGDIYKREKRYSEALQDYQKLLEL-- 1173

Query: 346  DEAELSHI 353
            DE  L  I
Sbjct: 1174 DEKNLIAI 1181



 Score = 44.3 bits (103), Expect = 0.17,   Method: Compositional matrix adjust.
 Identities = 82/409 (20%), Positives = 167/409 (40%), Gaps = 52/409 (12%)

Query: 173 SYYQRGQIYCLFGQYEEALRNLDKTIALNP------NFHVARAQRHFVVHKMIVPGDR-- 224
           ++Y + ++Y    +  EAL  LD+ +A  P       FH        V ++ +   ++  
Sbjct: 565 AWYGKARVYGRKYKAREALEALDQVLATLPAREKGSEFHGEILNYQGVFYEQMNQSEKAI 624

Query: 225 ERVEQSLK---EFRNFVDTHSNVVEACTLFAQVLV-----------------------DQ 258
           +  EQ++K   +  N+ ++ S+ ++    + + L                        D 
Sbjct: 625 DSFEQAIKISPQNPNYYNSLSSALQNVKRYDRALAAINRAIEIAPRSSWYSNRGNTYKDI 684

Query: 259 EDFDGAEEYFNRSIRVDPENASLYVHRAMLMLQARGNVDEAIKLIEKAISIDKSCMFAYE 318
           + +D A   +N+++ ++P N+  Y+ RA +  + R   D A+    +AI ID +   AY 
Sbjct: 685 KKWDLALADYNQALTLNPNNSRAYIARADVY-EERKEWDLALADYNRAIEIDANFAAAYI 743

Query: 319 TLGTIEVQRGRLEEAVKCFNKAL------PLARDEAELSHIY-SLRDAAIAQMKVCERYN 371
           + G+    R + + A+  FNKA+      P +     + +I+ S  + AIA +       
Sbjct: 744 SRGSFYTDRKQWDLALADFNKAITIDPNDPKSYGMRGIFYIFQSEEELAIADLTK----- 798

Query: 372 IKKKVSPRSQNITKNEKLAIKQLRENNDIIIRPADKGGKTVVMDKADYTQKMTSILNSND 431
            + +++P S         A ++ ++  D+ +    KG +        Y  +        +
Sbjct: 799 -EIEINPYSVVAYSMRGFAYEKWQKW-DLALADYQKGIELDPNSGLGYETRGRFYTERQE 856

Query: 432 YEIIPGDPTKTIEESEKYGNLENESGQKHA-ASDFTKAFADLDEAEKVDPNVADSYYQRG 490
           +++   D  K +E     GN     G  +     +  A AD ++A  ++     SY  RG
Sbjct: 857 WDLALADFNKALELDPNSGNGYQLRGNLYINQKKWDLALADFNKA--IELGYFSSYVNRG 914

Query: 491 QIYCLFGQYEEALRNLDKTIALNPNFHVARAQRHFVWTSTLAELMAFSD 539
            +Y    ++E AL + +K I L+P    A   R  ++       +A +D
Sbjct: 915 NVYFQQQKWELALADFNKAIELSPYPEFAYGARAILYWDRKEWDLALTD 963


>gi|432331042|ref|YP_007249185.1| tetratricopeptide repeat protein [Methanoregula formicicum SMSP]
 gi|432137751|gb|AGB02678.1| tetratricopeptide repeat protein [Methanoregula formicicum SMSP]
          Length = 4078

 Score = 82.0 bits (201), Expect = 8e-13,   Method: Compositional matrix adjust.
 Identities = 99/452 (21%), Positives = 188/452 (41%), Gaps = 81/452 (17%)

Query: 118 IEDLTQLVEDTSVDPKIKVNAHIKRAV--VHLHAASDFTKAFADLDEAEKVDPNVADSYY 175
            ED  Q  +   V     VNA+ ++ +  V L   SD   AF   ++A  +DP    S Y
Sbjct: 532 FEDALQAFDQAIVTNSKYVNAYYQKGLTLVQLERFSDAITAF---EQAAVIDPTHTLSLY 588

Query: 176 QRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQRHFVVHKMIVPGDRERVEQSLKEFR 235
            RG       ++ EA+   D  +A++P    AR ++   +  ++      R  ++++EF 
Sbjct: 589 HRGLTLGKLKRFMEAVVAFDAVLAISPENTNARYEKGIALFHLL------RYAEAVQEFH 642

Query: 236 NFVDTHSNVVEACTLFAQVLVDQEDFDGAEEYFNRSIRVDPENASLYVHRAM-------- 287
             ++ +  +V         L      + A   FN++I ++P+ A  YV + +        
Sbjct: 643 EALEQNPALVNGWLYMGISLAHIGHLEEALPAFNKAIALNPKLAEAYVRKGIVLFTLERH 702

Query: 288 -------------------------LMLQARGNVDEAIKLIEKAISIDKSCMFAYETLGT 322
                                    L L A G  DEA++  +KA+ I++ C  A+   G 
Sbjct: 703 EEAVSTLNRALDENAKDVYGWCYKGLALSALGRFDEAVRSFDKALEINRRCARAFFERGN 762

Query: 323 IEVQRGRLEEAVKCFNKALPLARDEAELSHIYSLRDAAIAQMKVCERYN-----IKKKVS 377
             ++ G+  EAV  +++AL L+ D+ ++  +Y  +  A+ Q    ER++      +  ++
Sbjct: 763 ALLKLGKPLEAVVSYDQALELSPDDPKI--LYQ-KGMALTQR---ERFDEAIRAFESALA 816

Query: 378 PRSQNITKNEKLAIKQL-RENNDIIIRPADKG-------GKT------VVMDKADYTQKM 423
              +N +    L +    RE  D  IR  D         G+        ++ +  YT+ +
Sbjct: 817 LEPENASGAYYLGVAYAGRERYDDAIRAFDNAIALDPTQGQAFHFKGIALVQRERYTEAI 876

Query: 424 TSILNSNDYEIIPGDPTKTIEESEKYGNLENESGQKHAASDFTKAFADLDEAEKVDPNVA 483
           T+ L++     +  DP   +  +  Y  L     ++     F  A  +   A ++DP++ 
Sbjct: 877 TAFLSA-----LKRDPDNPV--THYYLGLAYLQDKQ-----FKNAIPEFSRATELDPSLL 924

Query: 484 DSYYQRGQIYCLFGQYEEALRNLDKTIALNPN 515
           D+Y   G      G+++EA+   DK++A NP 
Sbjct: 925 DAYLYHGIALAAIGRHDEAVPLFDKSLAGNPT 956



 Score = 73.9 bits (180), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 96/461 (20%), Positives = 197/461 (42%), Gaps = 68/461 (14%)

Query: 66   SKAKRAFEHEDYLTAIRHCTEEIESTSSNHTKALARLLRATVYIFTSQSTKAIEDLTQ-L 124
            +K K   E   Y  AI      IE  +S +T+A   L  A +   T   T AIE   + L
Sbjct: 1201 NKGKSLIEIGRYPDAIVALKRAIEIETS-YTEAFYYLGYALLK--TGDYTGAIEAFDRNL 1257

Query: 125  VEDTSVDPKIKVNAHIKRAVVHLHAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLF 184
              D S  P      H  R +  L  +  F +A    D++   DP  A ++Y +G++Y   
Sbjct: 1258 TRDGSNAP-----GHFNRGIA-LEKSRRFEEALESFDKSLIYDPGNALAFYHKGKVYADL 1311

Query: 185  GQYEEALRNLDKTIALNPNFHVARAQRHFVVHKMIVPGDRERVEQSLKEFRNFVDTHSNV 244
            G++ +A    DKT+ L P +  AR +     + +       +  +S+ +F   +  ++N 
Sbjct: 1312 GRHADAAFAFDKTLQLKPRYTDARLRMGIAEYNL------GKFIESIHDFDKTIAENANS 1365

Query: 245  VEACTLFAQVLVDQEDFDGAEEYFNRSIRVDPENASLYVHRAMLMLQARGNVDEAIKLIE 304
             +A    A+ L D +  + A   ++ ++R+DP+ A ++ ++   +++     ++AI   E
Sbjct: 1366 SQAHYYKARALADLKRHEEAVGAYDLALRLDPDTADIHYYKGFSLMEL-AQFEKAIPEFE 1424

Query: 305  KAISIDKSCMFAYETLGTIEVQRGRLEEAVKCFNKALPLARDEAELSHIYSLRDAAIAQM 364
            +   +  +   A+   G   V+  R  +A++  ++++ L+   A   +   L   ++ + 
Sbjct: 1425 RTEVLTPANAMAFYQHGLALVRLERENDAIQVLDQSIALSPRYAPAQYQRGLALNSLGRY 1484

Query: 365  K-VCERYNIKKKVSPRSQNITKNEKLAIKQLRENND--------IIIRPADKGGKTVVMD 415
            +   E ++      P+  +    + +A+  L  + D        I IRP         + 
Sbjct: 1485 RESLESFDGALSADPQLADAALQKAIALASLGRHADALGAADVAIAIRPE--------LA 1536

Query: 416  KADYTQKMTSILNSNDYEIIPGDPTKTIEESEKYGNLENESGQKHAASDFTKAFADLDEA 475
            +A + +K T++    + + +P                              +A A  D A
Sbjct: 1537 QA-WHRKGTAL---AELDRVP------------------------------EALAAFDRA 1562

Query: 476  EKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNF 516
             ++DP  A S+++RG +    G++ EA++  D++++L PN+
Sbjct: 1563 IEIDPANARSHFERGLVLARLGRHIEAIQAFDQSLSLIPNY 1603



 Score = 73.6 bits (179), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 51/196 (26%), Positives = 93/196 (47%), Gaps = 8/196 (4%)

Query: 151  SDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQ 210
             ++  A   LD A ++ P  A  + Q+G  Y    QY +A+++ D+ + + P   V    
Sbjct: 3828 GNYDGAITALDRALEIMPKKAILHDQKGLAYAALEQYRDAVQSYDRALEIEPLPRV---- 3883

Query: 211  RHFVVHKMIVPGDRERVEQSLKEFRNFVDTHSNVVEACTLFAQVLVDQEDFDGAEEYFNR 270
                 HK I   +      +++ F   ++   N+ EA      V  D   +  AE+ + R
Sbjct: 3884 ---FAHKGIALAELGMYRDAIEAFDKAIEHDGNLAEAWMGKGNVQYDLGKYADAEKAYER 3940

Query: 271  SIRVDPENASLYVHRAMLMLQARGNVDEAIKLIEKAISIDKSCMFAYETLGTIEVQRGRL 330
             + +DPENA  +  + M +L A+   +EA++  ++A+ ID +   AY T G+  +   R 
Sbjct: 3941 GLALDPENAEAWTRQGM-VLSAQQKFEEALEHYDRALMIDPTFSIAYFTRGSALIAMKRY 3999

Query: 331  EEAVKCFNKALPLARD 346
            +EAV+ F+  L +  D
Sbjct: 4000 QEAVEAFDAMLHIQPD 4015



 Score = 73.6 bits (179), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 95/422 (22%), Positives = 163/422 (38%), Gaps = 57/422 (13%)

Query: 127  DTSVDPKIKVNAH-------------IKRAVVHLHAASDFTKAFADLDEAEKVDPNVADS 173
            D+  DPK  ++A+             + R  V L     + +A    D A ++DP  AD+
Sbjct: 3213 DSLGDPKETIDAYNRALALQPMHVPSLHRKGVALIRLERYEEAIKVFDRALEIDPACADA 3272

Query: 174  YYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQRHFVVHKMIVPGDRERVEQSLKE 233
             Y +G+     G Y EA++  DK + ++               K I      R + ++  
Sbjct: 3273 IYDKGRALSALGMYREAVKTYDKLLGIDAG------NAEVSYDKGIALAHLGRHDDAIVA 3326

Query: 234  FRNFVDTHSNVVEACTLFAQVLVDQEDFDGAEEYFNRSIRVDPENASLYVHRAMLMLQAR 293
            F   +D      +A       L        A E F+R I  +P +   +VHR  L L A 
Sbjct: 3327 FNKALDLDPGNAQAAYHKGLSLATTGRHPDAIEAFDRVIEREPGSVEGWVHRG-LSLFAL 3385

Query: 294  GNVDEAIKLIEKAISIDKSCMFAYETLGTIEVQRGRLEEAVKCFNKALPLARDEA----- 348
            G  ++A++   +AI+ID S   A+   G+     G  E+A++ FNKAL    D       
Sbjct: 3386 GKYNDAVESYVRAIAIDPSNAEAWYFKGSAIFASGGYEDAIEAFNKALEFRPDYVSAYND 3445

Query: 349  ---ELSHIYSLRDAAIAQMKVCERYNIKKKVSPRSQNITKNEKLAIKQLRENNDII---- 401
                L H+   R+A IA       ++    +  ++ +   ++  ++ +L + ++ I    
Sbjct: 3446 KGRSLFHMGMFREAVIA-------FDNALALQQKNVDALYHKGTSLLRLEQYDEAIQAFD 3498

Query: 402  ----IRPADK---GGKTVVMDKADYTQKMTSILNSNDYEIIPGDPTKTIEESEKYGNLEN 454
                IRP       GK + +      Q   S   +    I   D     +    Y  L  
Sbjct: 3499 LALKIRPNHAHLWTGKGIALSALGRDQDAVSFF-TKALGIDSRDARAAYQLGVSYLKL-- 3555

Query: 455  ESGQKHAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNP 514
                    S + +A   L+ A    P   ++ YQ+G+   + G + +A+   DK IA   
Sbjct: 3556 --------SKYHEAIRYLEGALAQQPACVEANYQKGRALAMLGMHNDAITAYDKAIAGKE 3607

Query: 515  NF 516
            NF
Sbjct: 3608 NF 3609



 Score = 73.6 bits (179), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 81/400 (20%), Positives = 163/400 (40%), Gaps = 76/400 (19%)

Query: 145 VHLHAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNF 204
           + L+    FT A +  D A  +DP  A  YY +G      G+++EA+ + +K I + P +
Sbjct: 116 IALYELGRFTDAISAYDHALMIDPRHAKVYYNKGIALADLGRHQEAIYSYNKAIEIVPGY 175

Query: 205 HVARAQRHFVVHKMIVPGDRERVEQSLKEFRNFVDTHSNVVEACTLFAQVLVDQEDFDGA 264
             A   +   ++++        ++ +L  F    +   + +      + +L  Q+  + A
Sbjct: 176 ARAYYNKGISLYEL------GNLDDALSAFNRAAELDPDDIWVWYYRSFILSKQDQNEFA 229

Query: 265 EEYFNRSIRVDPENASLYVHRAMLMLQARGNVDEAIKLIEKAISIDKSCMFAYETLGTIE 324
            +   + +  +P++A ++  R M + +  G  DEA+  + +A +I+     A+  LG   
Sbjct: 230 AQSAEKFLAQEPDHADIWAIRGMSLFKL-GRYDEALDALRQATAINPDLSDAWYYLGLAG 288

Query: 325 VQRGRLEEAVKCFNKALPLARDEAELSHIYSLRDAAIAQMKVCERYNIKKKVSPRSQNIT 384
           V+  + ++AV+ F + L                                 ++ P +    
Sbjct: 289 VETRQFDDAVEAFTRNL---------------------------------EIHPGNAGAL 315

Query: 385 KNEKLA---IKQLRE---NNDIIIRPADKGGKTVVMDKADYTQKMTSILNSNDYEIIPGD 438
            +  LA   +KQ RE   + D  + P + G K        + ++  + +N + YE     
Sbjct: 316 FHRGLAHYRLKQYREAVQDFDSTLEP-EPGNKEA------WYRRGIACVNLSRYE----- 363

Query: 439 PTKTIEESEKYGNLENESGQKHAASDFTKAFA------------DLDEAEKVDPNVADSY 486
             + +E   +   L    GQ HA S + +  A              D A +VDP+ A + 
Sbjct: 364 --EALESFNRRLGL----GQNHAGSLYFRGIAQARLGRNKEAIESFDAALQVDPSCASAA 417

Query: 487 YQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQRHFV 526
           +Q+G  Y   G++ EA+ + D+ + +NP    A   + F 
Sbjct: 418 FQQGVAYASLGRFSEAVASYDRALRINPGLSDAIYHKGFA 457



 Score = 71.2 bits (173), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 87/379 (22%), Positives = 165/379 (43%), Gaps = 31/379 (8%)

Query: 151  SDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQ 210
            + F KA  + +  E + P  A ++YQ G       +  +A++ LD++IAL+P +  A+ Q
Sbjct: 1414 AQFEKAIPEFERTEVLTPANAMAFYQHGLALVRLERENDAIQVLDQSIALSPRYAPAQYQ 1473

Query: 211  RHFVVHKMIVPGDRERVEQSLKEFRNFVDTHSNVVEACTLFAQVLVDQEDFDGAEEYFNR 270
            R   ++ +       R  +SL+ F   +     + +A    A  L        A    + 
Sbjct: 1474 RGLALNSL------GRYRESLESFDGALSADPQLADAALQKAIALASLGRHADALGAADV 1527

Query: 271  SIRVDPENASLYVHRAMLMLQARGNVDEAIKLIEKAISIDKSCMFAYETLGTIEVQRGRL 330
            +I + PE A  + HR    L     V EA+   ++AI ID +   ++   G +  + GR 
Sbjct: 1528 AIAIRPELAQAW-HRKGTALAELDRVPEALAAFDRAIEIDPANARSHFERGLVLARLGRH 1586

Query: 331  EEAVKCFNKALPLARDEAELSHIYSLRDAAIAQMKVCER------YNIKKKVSPRSQNIT 384
             EA++ F+++L L  +     ++ +  +  +A M V         +NI  ++ P    + 
Sbjct: 1587 IEAIQAFDQSLSLIPN-----YVPAFYNKGLALMAVGMHEEAVLSFNIALEILPDDPAVL 1641

Query: 385  KNEKLAIKQLRENNDIIIRPADKGGKTVVMDKADYT-QKMTSI--LNSNDYEIIPGDPTK 441
              + LA+ +L    D I   A      +   K +Y  QK  ++  L  +D E        
Sbjct: 1642 YQKGLALMRLESFEDAI--GAFDAALAIDAQKTEYPYQKGLALAALGRHD-EAEAAFSAA 1698

Query: 442  TIEESEKYGNLENESGQKHAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFG--QY 499
               + +    L ++         F++A  DL +  + +P +A+++  +G  +CLF   +Y
Sbjct: 1699 LARDPDNQDALYHKGLSLAELGRFSEAIEDLAKTVERNPKIANAWLIQG--FCLFAVERY 1756

Query: 500  EEALRNLDKTIAL---NPN 515
             +AL + DK + L   NP+
Sbjct: 1757 SDALASYDKALELETQNPH 1775



 Score = 70.1 bits (170), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 78/373 (20%), Positives = 161/373 (43%), Gaps = 34/373 (9%)

Query: 165  KVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQRHFVVHKMIVPGDR 224
            ++D   A++ Y RG  Y     Y EA+ + D TI   P+     AQ H+   + +    +
Sbjct: 2380 ELDSTQAEAAYLRGCAYLRLALYTEAISSFDYTIQYAPD----HAQSHY--RRGLALQAQ 2433

Query: 225  ERVEQSLKEFRNFVDTHSNVVEACTLFAQVLVDQEDFDGAEEYFNRSIRVDPENASLYVH 284
             + E++++ ++  +    ++ +A              D A + F+R +   PE A +  H
Sbjct: 2434 GKYEKAIRSYKQALTHDGSITDAVYQTGLCYAALNKNDQALKTFDRVLETLPERADILFH 2493

Query: 285  --RAMLMLQARGNVDEAIKLIEKAISIDKSCMFAYETLGTIEVQRGRLEEAVKCFNKALP 342
              RA+  L      +EA+  I+ +++I+ + +  +E  G+   + GR EE+++ ++++L 
Sbjct: 2494 KSRALFRLM---RYEEALTAIDASLAIENNDVAVWEQKGSTLYELGRFEESLEAYDRSLA 2550

Query: 343  LARDEAELSHI--YSLRDAAIAQMKVCERYNIKKKVSPRSQNITKNEKLAIKQLRENNDI 400
            L  D     ++   SL D A        RY  ++ +    + I  +E  A   LR+ + +
Sbjct: 2551 LNPDSITCWYLKGRSLSDLA--------RY--EEAIPCFDRVIETDETCAGAWLRKGSSL 2600

Query: 401  I----IRPADKGGKTVVMDKAD----YTQKMTSILNSNDYEIIPGDPTKTIEESEKYGNL 452
            +      PA +     +  + D    +  +  ++     YE       + I  + KY N 
Sbjct: 2601 LSLGKFAPAIEALTRSLDLQPDNANGWYDRGIALAELKQYEDAVASYDRAIAINRKYANA 2660

Query: 453  ENESGQK--HAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTI 510
              + G    H   D T A    +    +DP   +++Y +G      G++++A+   D  +
Sbjct: 2661 WYDKGVALVHLGRD-TDAIQAFENTTAIDPRFMNAFYDKGLALARLGEHQDAVTAFDGVL 2719

Query: 511  ALNPNFHVARAQR 523
            A++ +F  A  Q+
Sbjct: 2720 AISASFVPALTQK 2732



 Score = 67.8 bits (164), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 79/362 (21%), Positives = 154/362 (42%), Gaps = 52/362 (14%)

Query: 155 KAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQRHFV 214
           +A    D A +VDP+ A + +Q+G  Y   G++ EA+ + D+ + +NP    A   + F 
Sbjct: 398 EAIESFDAALQVDPSCASAAFQQGVAYASLGRFSEAVASYDRALRINPGLSDAIYHKGFA 457

Query: 215 VHKMIVPGDRERVEQSLKEFRNFVDTHSNVVEACTLFAQVLVDQEDFDGAEEYFNRSIRV 274
           + K+       R E +++EF   V       +A       LV    FD A E F+ S+ +
Sbjct: 458 LSKL------GRTEDAVQEFERTVAFDPKNAKAFHQKGLQLVKIGRFDEAIEAFDESLAL 511

Query: 275 DPENASLYVHRAMLMLQARGNVDEAIKLIEKAISIDKSCMFAYETLGTIEVQRGRLEEAV 334
            P  A     +   +++  G  ++A++  ++AI  +   + AY   G   VQ  R  +A+
Sbjct: 512 KPGFAQAAFDKGAALIRL-GKFEDALQAFDQAIVTNSKYVNAYYQKGLTLVQLERFSDAI 570

Query: 335 KCFNKALPLARDEAELSHIYSL--RDAAIAQMK----VCERYNIKKKVSPRSQNITKNEK 388
             F +A  +     + +H  SL  R   + ++K        ++    +SP + N    + 
Sbjct: 571 TAFEQAAVI-----DPTHTLSLYHRGLTLGKLKRFMEAVVAFDAVLAISPENTNARYEKG 625

Query: 389 LAIKQLRENNDIIIRPADKGGKTVVMDKADYTQKMTSILNSNDYEIIPGDPTKTIEESEK 448
           +A+  L       +R A+      V +  +  ++  +++N   Y  I       +EE   
Sbjct: 626 IALFHL-------LRYAE-----AVQEFHEALEQNPALVNGWLYMGISLAHIGHLEE--- 670

Query: 449 YGNLENESGQKHAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDK 508
                       A   F KA A       ++P +A++Y ++G +     ++EEA+  L++
Sbjct: 671 ------------ALPAFNKAIA-------LNPKLAEAYVRKGIVLFTLERHEEAVSTLNR 711

Query: 509 TI 510
            +
Sbjct: 712 AL 713



 Score = 66.6 bits (161), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 92/476 (19%), Positives = 189/476 (39%), Gaps = 76/476 (15%)

Query: 113  QSTKAIEDLTQLVEDTSVDPKIKVNAHIKRAVVHLHAASDFTKAFADLDEAEKVDPNVAD 172
            Q  +  E +T  +     DP   V  H    + +L     F  A  +   A ++DP++ D
Sbjct: 868  QRERYTEAITAFLSALKRDPDNPVT-HYYLGLAYLQD-KQFKNAIPEFSRATELDPSLLD 925

Query: 173  SYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHV----ARAQRHFVVHKM--IVPGDRER 226
            +Y   G      G+++EA+   DK++A NP  H+    ARA+   V+ +   +V  D +R
Sbjct: 926  AYLYHGIALAAIGRHDEAVPLFDKSLAGNPT-HIDAMTARARSLMVLERFSEVVETD-DR 983

Query: 227  V------------------------EQSLKEFRNFVDTHSNVVEACTLFAQVLVDQEDFD 262
            +                        ++++  +   ++ +S   EA       L+D     
Sbjct: 984  ILSLNPTLIDTWMQKGDALASQLLKQEAIGAYSKALEINSGFAEAWIRKGNALMDLNKVQ 1043

Query: 263  GAEEYFNRSIRVDPENASLYVHRAMLMLQARGNVDEAIKLIEKAISIDKSCMFAYETLGT 322
             A   ++R++ ++P    +++ +    LQ  G  ++AI    K++ ID      +   G 
Sbjct: 1044 DAVGAYSRALEINPALCDIWMRKGD-ALQQLGKTEDAILAYGKSLKIDPDNEPGWIRQGK 1102

Query: 323  IEVQRGRLEEAVKCFNKALPLARDEAELSHIYSLRDAAIAQMKVCER----YNIKKKVSP 378
                  R ++A+  F+ A+ L +   E    +  +  A+ ++   E     + I  ++ P
Sbjct: 1103 AFFDLTRYQDAIDAFDNAISLNQRSIE---AFWYKGLALEKVNRHEGAIHVFEILLEIDP 1159

Query: 379  RSQNITKNEKLAIKQLRENNDIIIR------------PADKGGKTVVMDKADYTQKMTSI 426
            ++ +   ++ LA+  L ++ D I              PA       +++   Y   + ++
Sbjct: 1160 KNGDAQFHKGLALAVLGDHRDAIGSFDKTLQILPDSAPAWYNKGKSLIEIGRYPDAIVAL 1219

Query: 427  LNSNDYE--------------IIPGDPTKTIEESEKYGNLENESGQKH--------AASD 464
              + + E              +  GD T  IE  ++    +  +   H         +  
Sbjct: 1220 KRAIEIETSYTEAFYYLGYALLKTGDYTGAIEAFDRNLTRDGSNAPGHFNRGIALEKSRR 1279

Query: 465  FTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVAR 520
            F +A    D++   DP  A ++Y +G++Y   G++ +A    DKT+ L P +  AR
Sbjct: 1280 FEEALESFDKSLIYDPGNALAFYHKGKVYADLGRHADAAFAFDKTLQLKPRYTDAR 1335



 Score = 66.2 bits (160), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 78/372 (20%), Positives = 151/372 (40%), Gaps = 56/372 (15%)

Query: 151  SDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQ 210
            S + +A   L+ A    P   ++ YQ+G+   + G + +A+   DK IA   NF  A   
Sbjct: 3556 SKYHEAIRYLEGALAQQPACVEANYQKGRALAMLGMHNDAITAYDKAIAGKENFAEA--- 3612

Query: 211  RHFVVHKMIVPGDRERVEQSLKEFRNFVDTHSNVVEACTLFAQVLVDQEDFDGAEEYFNR 270
                +++ I     ++ ++++ ++ + +    +   A       L+     D A E FN 
Sbjct: 3613 ---WLYRGISQASLDQYDRAILDYDHALGLRPDYAPAHLFRGIALIHLSRHDQAVEAFNH 3669

Query: 271  SIRVDPENASLYVHRAMLMLQARGNVDEAIKLIEKAISIDKSCMFAYETLGTIEVQRGRL 330
            ++ V+PE      ++ + +L+ +    EAI + ++A++ +     A+   G    + G+ 
Sbjct: 3670 ALTVEPEYPEALFYKGLALLE-QELYTEAIPVFDQALAANNRYAEAWHNKGVALARTGQH 3728

Query: 331  EEAVKCFNKALPLARDEAE--------LSHIYSLRDAAIAQMKVCERYNIKKKVSPRSQN 382
            EEA+  FN AL +  D AE        L H    R+A  +  +V         ++P + N
Sbjct: 3729 EEAIAAFNAALGIRSDYAEALFERGRSLVHTGMFREAIASFDQVL-------ILAPGNAN 3781

Query: 383  ITKNEKLAIKQLRENNDIIIRPADKGGKTVVMDKADYTQKMTSILNSNDYEIIPGDPTKT 442
                         E    +I   +  G T   D+A         +N + ++ + G     
Sbjct: 3782 AH----------FEKGRALIALGNHAGATAAFDRA-------IDINPSCWQALAGK---- 3820

Query: 443  IEESEKYGNLENESGQKHAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEA 502
                   G  E   G      ++  A   LD A ++ P  A  + Q+G  Y    QY +A
Sbjct: 3821 -------GRAETYQG------NYDGAITALDRALEIMPKKAILHDQKGLAYAALEQYRDA 3867

Query: 503  LRNLDKTIALNP 514
            +++ D+ + + P
Sbjct: 3868 VQSYDRALEIEP 3879



 Score = 63.9 bits (154), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 78/361 (21%), Positives = 150/361 (41%), Gaps = 32/361 (8%)

Query: 168  PNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQRHFVVHKMIVPGDRERV 227
            P+ A ++Y+ G       ++++A+   D+ I + P++        F  H++     R R 
Sbjct: 3165 PDNATAWYENGLALSRLKRHKDAIHAFDQAIRVRPDY--------FDAHEV-----RARS 3211

Query: 228  EQSLKEFRNFVDTHSNVVEACTLF-------AQVLVDQEDFDGAEEYFNRSIRVDPENAS 280
              SL + +  +D ++  +    +           L+  E ++ A + F+R++ +DP  A 
Sbjct: 3212 FDSLGDPKETIDAYNRALALQPMHVPSLHRKGVALIRLERYEEAIKVFDRALEIDPACAD 3271

Query: 281  LYVHRAMLMLQARGNVDEAIKLIEKAISIDKSCMFAYETLGTIEVQRGRLEEAVKCFNKA 340
              ++     L A G   EA+K  +K + ID          G      GR ++A+  FNKA
Sbjct: 3272 A-IYDKGRALSALGMYREAVKTYDKLLGIDAGNAEVSYDKGIALAHLGRHDDAIVAFNKA 3330

Query: 341  LPLARDEAELSHIYSLRDAAIAQMK-VCERYNIKKKVSPRSQNITKNEKLAIKQLRENND 399
            L L    A+ ++   L  A   +     E ++   +  P S     +  L++  L + ND
Sbjct: 3331 LDLDPGNAQAAYHKGLSLATTGRHPDAIEAFDRVIEREPGSVEGWVHRGLSLFALGKYND 3390

Query: 400  IIIRPADKGGKTVVMDKAD---YTQKMTSILNSNDYEIIPGDPTKTIEESEKYGNLENES 456
             +    +   + + +D ++   +  K ++I  S  YE       K +E    Y +  N+ 
Sbjct: 3391 AV----ESYVRAIAIDPSNAEAWYFKGSAIFASGGYEDAIEAFNKALEFRPDYVSAYNDK 3446

Query: 457  GQK--HAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNP 514
            G+   H    F +A    D A  +     D+ Y +G       QY+EA++  D  + + P
Sbjct: 3447 GRSLFHMGM-FREAVIAFDNALALQQKNVDALYHKGTSLLRLEQYDEAIQAFDLALKIRP 3505

Query: 515  N 515
            N
Sbjct: 3506 N 3506



 Score = 63.2 bits (152), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 79/410 (19%), Positives = 152/410 (37%), Gaps = 99/410 (24%)

Query: 139  HIKRAVVHLHAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTI 198
            H  RA+  L     + +A   +D +  ++ N    + Q+G      G++EE+L   D+++
Sbjct: 2493 HKSRALFRL---MRYEEALTAIDASLAIENNDVAVWEQKGSTLYELGRFEESLEAYDRSL 2549

Query: 199  ALNPNFHVARAQRHFVVHKMIVPG----DRERVEQSLKEFRNFVDTHSNVVEACTLFAQV 254
            ALNP+           +    + G    D  R E+++  F   ++T      A       
Sbjct: 2550 ALNPD----------SITCWYLKGRSLSDLARYEEAIPCFDRVIETDETCAGAWLRKGSS 2599

Query: 255  LVDQEDFDGAEEYFNRSIRVDPENASLYVHRAMLMLQARGNVDEAIKLIEKAISIDKSCM 314
            L+    F  A E   RS+ + P+NA+ +  R + + + +   ++A+   ++AI+I++   
Sbjct: 2600 LLSLGKFAPAIEALTRSLDLQPDNANGWYDRGIALAELK-QYEDAVASYDRAIAINRKYA 2658

Query: 315  FAYETLGTIEVQRGRLEEAVKCFNKALPLARDEAELSHIYSLRDAAIAQMKVCERYNIKK 374
             A+   G   V  GR  +A++ F                                     
Sbjct: 2659 NAWYDKGVALVHLGRDTDAIQAFEN---------------------------------TT 2685

Query: 375  KVSPRSQNITKNEKLAIKQLRENNDIIIRPADKGGKTVVMDKADY----TQKMTSILNSN 430
             + PR  N   ++ LA+ +L E+ D +          V+   A +    TQK  S+    
Sbjct: 2686 AIDPRFMNAFYDKGLALARLGEHQDAVT-----AFDGVLAISASFVPALTQKGLSLFQLQ 2740

Query: 431  DYEIIPGDPTKTIEESEKYGNLENESGQKHAASDFTKAFADLDEAEKVDPNVADSYYQRG 490
             YE                                 +A + L  A  ++  + +++Y +G
Sbjct: 2741 RYE---------------------------------EAASSLGAALDLNSGIFEAWYHQG 2767

Query: 491  QIYCLFGQYEEALRNLDKTIALNPNFHVARAQRHFV------WTSTLAEL 534
              Y   G   EA+ + D+ I+L+P       ++  V      W + +AE 
Sbjct: 2768 LAYRHLGNVSEAIASFDQAISLDPRSFAVHYEKGLVLSGQEQWDAAVAEF 2817



 Score = 61.6 bits (148), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 91/431 (21%), Positives = 170/431 (39%), Gaps = 41/431 (9%)

Query: 111 TSQSTKAIEDLTQLVEDTSVDPKIKVNAHIKRAVVHLHAASDFTKAFADLDEAEKVDPNV 170
           T Q   A+E  T+ +E   + P     A   R + H +    + +A  D D   + +P  
Sbjct: 291 TRQFDDAVEAFTRNLE---IHPG-NAGALFHRGLAH-YRLKQYREAVQDFDSTLEPEPGN 345

Query: 171 ADSYYQRGQIYCL-FGQYEEALRNLDKTIALNPNFHVARAQRHFVVHKMIVPGDRERVEQ 229
            +++Y+RG I C+   +YEEAL + ++ + L  N H        +  + I      R ++
Sbjct: 346 KEAWYRRG-IACVNLSRYEEALESFNRRLGLGQN-HAGS-----LYFRGIAQARLGRNKE 398

Query: 230 SLKEFRNFVDTHSNVVEACTLFAQVLVDQEDFDGAEEYFNRSIRVDPENASLYVHRAMLM 289
           +++ F   +    +   A             F  A   ++R++R++P  +    H+    
Sbjct: 399 AIESFDAALQVDPSCASAAFQQGVAYASLGRFSEAVASYDRALRINPGLSDAIYHKG-FA 457

Query: 290 LQARGNVDEAIKLIEKAISIDKSCMFAYETLGTIEVQRGRLEEAVKCFNKALPLARDEAE 349
           L   G  ++A++  E+ ++ D     A+   G   V+ GR +EA++ F+++L L    A+
Sbjct: 458 LSKLGRTEDAVQEFERTVAFDPKNAKAFHQKGLQLVKIGRFDEAIEAFDESLALKPGFAQ 517

Query: 350 LSHIYSLRDAAIAQMKVCERYNIKKKVSPRSQNITKNEK---------LAIKQLRENNDI 400
            +      D   A +++ +    +  +    Q I  N K         L + QL   +D 
Sbjct: 518 AAF-----DKGAALIRLGK---FEDALQAFDQAIVTNSKYVNAYYQKGLTLVQLERFSDA 569

Query: 401 IIRPADKGGKTVVMDKAD----YTQKMT-SILNSNDYEIIPGDPTKTIEESEKYGNLENE 455
           I        +  V+D       Y + +T   L      ++  D    I         E  
Sbjct: 570 ITAFE----QAAVIDPTHTLSLYHRGLTLGKLKRFMEAVVAFDAVLAISPENTNARYEKG 625

Query: 456 SGQKHAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPN 515
               H    + +A  +  EA + +P + + +   G      G  EEAL   +K IALNP 
Sbjct: 626 IALFHLLR-YAEAVQEFHEALEQNPALVNGWLYMGISLAHIGHLEEALPAFNKAIALNPK 684

Query: 516 FHVARAQRHFV 526
              A  ++  V
Sbjct: 685 LAEAYVRKGIV 695



 Score = 60.8 bits (146), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 78/361 (21%), Positives = 135/361 (37%), Gaps = 66/361 (18%)

Query: 168  PNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQRHFVVHKMIVPGDRERV 227
            P+  +  + RG    L G+Y++A+R+ DK +ALN              HK I      R 
Sbjct: 2995 PDRFEPPFLRGLSLMLTGRYDDAVRSFDKALALNET------DPDIWYHKAISLAHLGRA 3048

Query: 228  EQSLKEFRNFVDTHSNVVEACTLFAQVLVDQEDFDGAEEYFNRSIRVDPENASLYVHRAM 287
            E+++  F   +    +  EA     +     + FD A E F+R I   P++A+ +  + M
Sbjct: 3049 EEAVPAFDKVLGLRPDDAEAFLGRGRAYYTLKSFDRAIESFDRVIGYLPQHAAAWHEKGM 3108

Query: 288  LMLQARGNVDEAIKLIEKAISIDKSCMFAYETLGTIEVQRGRLEEAVKCFNKALPLARDE 347
             +                           Y+         GR EEA+  F+K L      
Sbjct: 3109 AL---------------------------YDL--------GRYEEAIAAFDKTLEEDGGN 3133

Query: 348  AELSHIYSLRDAAIAQ-MKVCERYNIKKKVSPRSQNITKNEKLAIKQLRENNDIIIRPAD 406
             +  +  +L  AAI +  +  E + +    +P +        LA+ +L+ + D I     
Sbjct: 3134 HDALYYCALAYAAIGKDAEAVESFELLLTRAPDNATAWYENGLALSRLKRHKDAI----- 3188

Query: 407  KGGKTVVMDKADYTQKMTSILNSNDYEIIPGDPTKTIEESEKYGNLENESGQKHAAS--- 463
                  +  + DY         S D     GDP +TI+   +   L+      H  S   
Sbjct: 3189 HAFDQAIRVRPDYFDAHEVRARSFD---SLGDPKETIDAYNRALALQ----PMHVPSLHR 3241

Query: 464  ---------DFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNP 514
                      + +A    D A ++DP  AD+ Y +G+     G Y EA++  DK + ++ 
Sbjct: 3242 KGVALIRLERYEEAIKVFDRALEIDPACADAIYDKGRALSALGMYREAVKTYDKLLGIDA 3301

Query: 515  N 515
             
Sbjct: 3302 G 3302



 Score = 60.8 bits (146), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 89/452 (19%), Positives = 185/452 (40%), Gaps = 69/452 (15%)

Query: 92  SSNHTKALARLLRATVYIFTSQSTKAIEDLTQLVEDTSVDPKIKVNAHIKRAVVHLHAAS 151
             NH  +L    R        ++ +AIE     ++   VDP    +A  ++ V +  +  
Sbjct: 376 GQNHAGSL--YFRGIAQARLGRNKEAIESFDAALQ---VDPSC-ASAAFQQGVAYA-SLG 428

Query: 152 DFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQR 211
            F++A A  D A +++P ++D+ Y +G      G+ E+A++  ++T+A +P    A  Q+
Sbjct: 429 RFSEAVASYDRALRINPGLSDAIYHKGFALSKLGRTEDAVQEFERTVAFDPKNAKAFHQK 488

Query: 212 HFVVHKMIVPGDRERVEQSLKEFRNFVDTHSNVVEACTLFAQVLVDQEDFDGAEEYFNRS 271
              + K+       R +++++ F   +       +A       L+    F+ A + F+++
Sbjct: 489 GLQLVKI------GRFDEAIEAFDESLALKPGFAQAAFDKGAALIRLGKFEDALQAFDQA 542

Query: 272 IRVDPENASLYVHRAMLMLQARGNVDEAIKLIEKAISIDKSCMFAYETLGTIEVQRGRLE 331
           I  + +  + Y  + + ++Q      +AI   E+A  ID +   +    G    +  R  
Sbjct: 543 IVTNSKYVNAYYQKGLTLVQLE-RFSDAITAFEQAAVIDPTHTLSLYHRGLTLGKLKRFM 601

Query: 332 EAVKCFNKALPL------ARDEAELSHIYSLRDAAIAQ--------------------MK 365
           EAV  F+  L +      AR E  ++  + LR A   Q                    + 
Sbjct: 602 EAVVAFDAVLAISPENTNARYEKGIALFHLLRYAEAVQEFHEALEQNPALVNGWLYMGIS 661

Query: 366 VCERYNIKKKVSPRSQNITKNEKLAIKQLRENNDIIIRPADKGGKTVVMDKADYTQKMTS 425
           +    ++++ +   ++ I  N KLA   +R              K +V+   +  ++  S
Sbjct: 662 LAHIGHLEEALPAFNKAIALNPKLAEAYVR--------------KGIVLFTLERHEEAVS 707

Query: 426 ILNSNDYEIIPGDPTKTIEESEK--YGNLENESGQKHAASDFTKAFADLDEAEKVDPNVA 483
            LN            + ++E+ K  YG          A   F +A    D+A +++   A
Sbjct: 708 TLN------------RALDENAKDVYGWCYKGLALS-ALGRFDEAVRSFDKALEINRRCA 754

Query: 484 DSYYQRGQIYCLFGQYEEALRNLDKTIALNPN 515
            ++++RG      G+  EA+ + D+ + L+P+
Sbjct: 755 RAFFERGNALLKLGKPLEAVVSYDQALELSPD 786



 Score = 57.4 bits (137), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 93/433 (21%), Positives = 166/433 (38%), Gaps = 74/433 (17%)

Query: 98   ALARLLRATVYIFTSQSTKAIEDLTQLVEDTSVDPKIKVNAHIKRAVVHLHAASDFTKAF 157
            A A L R    I  S+  +A+E     +   +V+P+       K   + L     +T+A 
Sbjct: 3644 APAHLFRGIALIHLSRHDQAVEAFNHAL---TVEPEYPEALFYKG--LALLEQELYTEAI 3698

Query: 158  ADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQRHFVVHK 217
               D+A   +   A++++ +G      GQ+EEA+   +  + +  ++  A  +R      
Sbjct: 3699 PVFDQALAANNRYAEAWHNKGVALARTGQHEEAIAAFNAALGIRSDYAEALFER------ 3752

Query: 218  MIVPGDRERVEQSLKEFRNFVDTHSNVVEACTLFAQVLVDQEDFDGAEEYFNRSIRVDPE 277
                  R  V   +  FR          EA   F QVL+                 + P 
Sbjct: 3753 -----GRSLVHTGM--FR----------EAIASFDQVLI-----------------LAPG 3778

Query: 278  NASLYVHRAMLMLQARGNVDEAIKLIEKAISIDKSCMFAYETLGTIEVQRGRLEEAVKCF 337
            NA+ +  +   ++ A GN   A    ++AI I+ SC  A    G  E  +G  + A+   
Sbjct: 3779 NANAHFEKGRALI-ALGNHAGATAAFDRAIDINPSCWQALAGKGRAETYQGNYDGAITAL 3837

Query: 338  NKALPLARDEAELSHIYSLRDAAIAQMK-VCERYNIKKKVSPRSQNITKNEKLAIKQLRE 396
            ++AL +   +A L     L  AA+ Q +   + Y+   ++ P  + +  ++ +A+ +L  
Sbjct: 3838 DRALEIMPKKAILHDQKGLAYAALEQYRDAVQSYDRALEIEPLPR-VFAHKGIALAELGM 3896

Query: 397  NNDII------------IRPADKGGKTVVMDKADYTQKMTSILNSNDYE-IIPGDPTKTI 443
              D I            +  A  G   V  D   Y     +      YE  +  DP    
Sbjct: 3897 YRDAIEAFDKAIEHDGNLAEAWMGKGNVQYDLGKYADAEKA------YERGLALDP---- 3946

Query: 444  EESEKYGNLENESGQKHAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEAL 503
            E +E +     +     A   F +A    D A  +DP  + +Y+ RG       +Y+EA+
Sbjct: 3947 ENAEAW---TRQGMVLSAQQKFEEALEHYDRALMIDPTFSIAYFTRGSALIAMKRYQEAV 4003

Query: 504  RNLDKTIALNPNF 516
               D  + + P+F
Sbjct: 4004 EAFDAMLHIQPDF 4016



 Score = 57.4 bits (137), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 51/237 (21%), Positives = 108/237 (45%), Gaps = 13/237 (5%)

Query: 104  RATVYIFTSQSTKAIEDLTQLVEDTSVDPKIKVNAHIKRAVVHLHAASDFTKAFADLDEA 163
            +   Y    Q   A++   + +E   ++P  +V AH   A+  L    D  +AF   D+A
Sbjct: 3854 KGLAYAALEQYRDAVQSYDRALE---IEPLPRVFAHKGIALAELGMYRDAIEAF---DKA 3907

Query: 164  EKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQRHFVVHKMIVPGD 223
             + D N+A+++  +G +    G+Y +A +  ++ +AL+P    A  ++  V+        
Sbjct: 3908 IEHDGNLAEAWMGKGNVQYDLGKYADAEKAYERGLALDPENAEAWTRQGMVLSA------ 3961

Query: 224  RERVEQSLKEFRNFVDTHSNVVEACTLFAQVLVDQEDFDGAEEYFNRSIRVDPENASLYV 283
            +++ E++L+ +   +        A       L+  + +  A E F+  + + P+    Y+
Sbjct: 3962 QQKFEEALEHYDRALMIDPTFSIAYFTRGSALIAMKRYQEAVEAFDAMLHIQPDFVDAYI 4021

Query: 284  HRAMLMLQARGNVDEAIKLIEKAISIDKSCMFAYETLGTIEVQRGRLEEAVKCFNKA 340
            H+    LQ      +A+ + ++A+ ID +    +  +G I  + G+ EEA  C+ K 
Sbjct: 4022 HKGR-ALQELELYQDALAVFKRALEIDPTRKECWNDIGDILDRIGKHEEARICYEKG 4077



 Score = 56.6 bits (135), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 94/475 (19%), Positives = 191/475 (40%), Gaps = 29/475 (6%)

Query: 49   VELTNGDTNESHELDLLS-KAKRAFEHEDYLTAIRHCTEEIESTSSNHTKALARLLRATV 107
            +EL +   N++   DLL+ K    +    Y   + +  + ++    + T     L R   
Sbjct: 2101 IELDHALENDATNADLLTCKGYSLYRLARYKETVEYLGKAVKRRPKDRT---VLLFRGKA 2157

Query: 108  YIFTSQSTKAIEDLTQLVEDTSVDPKIKVNAHIKRAVVHLHAASDFTKAFADLDEAEKVD 167
            ++   +   A     +L   T++DPK     + K     L A   +  A    + A  ++
Sbjct: 2158 FLRLGRWENAYGMFDKL---TAIDPKYVKGWYYKGQA--LLAKDLYEDALLAFETAISLE 2212

Query: 168  PNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQRHFVVHKMIVPGDRERV 227
               A ++Y +G+      ++ EA+   ++ + L P+   A  ++   +    +  D    
Sbjct: 2213 ETCAGAWYNKGRALGSLARHAEAVAAFNRALELQPDMRDAAYRKGLALAAQYLHSD---- 2268

Query: 228  EQSLKEFRNFVDTHSNVVEACTLFAQVLVDQEDFDGAEEYFNRSIRVDPENASLYVHRAM 287
              ++  F +      +  E        L+    +  A E FN++I + P+NA  ++++  
Sbjct: 2269 --AVAAFDSAASLGLDQGELWYCRGTSLMQLARWQEALESFNKTIALVPDNAPAWLNKG- 2325

Query: 288  LMLQARGNVDEAIKLIEKAISIDKSCMFAYETLGTIEVQRGRLEEAVKCFNKALPLARDE 347
            L LQ       A +  EK  ++D + + A    G    +  R EEA+  F + L L   +
Sbjct: 2326 LCLQKLNYHAAATEAFEKTSALDATSVPAAFGRGQSLAELDRDEEAIAAFTRTLELDSTQ 2385

Query: 348  AELSHIYSLRDAAIAQMKV----CERYNIKKKVSPRSQNITKNEKLAIKQLRENNDIIIR 403
            AE ++   LR  A  ++ +       ++   + +P          LA+ Q +   +  IR
Sbjct: 2386 AEAAY---LRGCAYLRLALYTEAISSFDYTIQYAPDHAQSHYRRGLAL-QAQGKYEKAIR 2441

Query: 404  PADKG--GKTVVMDKADYTQKMTSILNSNDYEIIPGDPTKTIEE-SEKYGNLENESGQKH 460
               +       + D    T    + LN ND  +   D  + +E   E+   L ++S    
Sbjct: 2442 SYKQALTHDGSITDAVYQTGLCYAALNKNDQALKTFD--RVLETLPERADILFHKSRALF 2499

Query: 461  AASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPN 515
                + +A   +D +  ++ N    + Q+G      G++EE+L   D+++ALNP+
Sbjct: 2500 RLMRYEEALTAIDASLAIENNDVAVWEQKGSTLYELGRFEESLEAYDRSLALNPD 2554



 Score = 53.5 bits (127), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 85/437 (19%), Positives = 166/437 (37%), Gaps = 64/437 (14%)

Query: 145 VHLHAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNF 204
           + L+   +   A +  + A ++DP+    +Y R  I     Q E A ++ +K +A  P+ 
Sbjct: 184 ISLYELGNLDDALSAFNRAAELDPDDIWVWYYRSFILSKQDQNEFAAQSAEKFLAQEPDH 243

Query: 205 HVARAQRHFVVHKMIVPGDRERVEQSLKEFRNFVDTHSNVVEACTLFAQVLVDQEDFDGA 264
               A R   + K+       R +++L   R     + ++ +A        V+   FD A
Sbjct: 244 ADIWAIRGMSLFKL------GRYDEALDALRQATAINPDLSDAWYYLGLAGVETRQFDDA 297

Query: 265 EEYFNRSIRVDPENASLYVHRAMLMLQARGNVDEAIKLIEKAISIDKSCMFAYETLGTIE 324
            E F R++ + P NA    HR +   + +    EA++  +  +  +     A+   G   
Sbjct: 298 VEAFTRNLEIHPGNAGALFHRGLAHYRLK-QYREAVQDFDSTLEPEPGNKEAWYRRGIAC 356

Query: 325 VQRGRLEEAVKCFNKALPLARDEAELSHIYSLRDAAIAQMK-VCERYNIKKKVSPRSQNI 383
           V   R EEA++ FN+ L L ++ A   +   +  A + + K   E ++   +V P   + 
Sbjct: 357 VNLSRYEEALESFNRRLGLGQNHAGSLYFRGIAQARLGRNKEAIESFDAALQVDPSCASA 416

Query: 384 TKNEKLAIKQLRENNDII--------IRPA------------DKGGKT----------VV 413
              + +A   L   ++ +        I P              K G+T          V 
Sbjct: 417 AFQQGVAYASLGRFSEAVASYDRALRINPGLSDAIYHKGFALSKLGRTEDAVQEFERTVA 476

Query: 414 MDKAD---YTQKMTSILNSNDYEIIPGDPTKTIEESEKYGNLENESGQKHAASD------ 464
            D  +   + QK   ++    ++    +  +  +ES     L  + G   AA D      
Sbjct: 477 FDPKNAKAFHQKGLQLVKIGRFD----EAIEAFDES-----LALKPGFAQAAFDKGAALI 527

Query: 465 ----FTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVAR 520
               F  A    D+A   +    ++YYQ+G       ++ +A+   ++   ++P   ++ 
Sbjct: 528 RLGKFEDALQAFDQAIVTNSKYVNAYYQKGLTLVQLERFSDAITAFEQAAVIDPTHTLSL 587

Query: 521 AQRHFVWTSTLAELMAF 537
             R      TL +L  F
Sbjct: 588 YHRGL----TLGKLKRF 600



 Score = 52.0 bits (123), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 82/388 (21%), Positives = 150/388 (38%), Gaps = 59/388 (15%)

Query: 138  AHIKRAVVHLHAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKT 197
            A + R   HL    ++  A A      +++P   D+++++G+   +  +Y +AL   D  
Sbjct: 1912 AFLYRGFAHLQV-REYEDAVAAFTRVVEINPANTDAWHEKGKALVVLEKYAKALEAFDGY 1970

Query: 198  IALNPNFHVARAQRHFVVHKMIVPGDRERVEQSLKEFRNFVDTHSNV----VEACTLFAQ 253
            +   P+  V   Q+   + K+      +R E +L  F + +D   N      E    F +
Sbjct: 1971 LGQKPDDPVILCQKGLSLVKL------DRFEDALAAFTSAIDKGMNTPGVHTEQALCFLK 2024

Query: 254  VLVDQEDFDGAEEYFNRSIRVDPENASLYVHRAMLM----LQARGNVDEAIKLIEKAISI 309
            +  D+E    A    +R++ +D         RA+L     L   G  +EA+   +  I+ 
Sbjct: 2025 LGRDEEVIRSA----DRALALDSSET-----RALLAKGESLARLGRHEEAVAAFDGVIAR 2075

Query: 310  DKSCMFAYETLGTIEVQRGRLEEAVKCFNKALPLARDEAELSHIYSLRDAAIAQMKVCER 369
            D     A    G   VQ GR E+AV   + AL                DA  A +  C+ 
Sbjct: 2076 DAENDRARRGRGVSLVQLGRYEDAVIELDHALE--------------NDATNADLLTCKG 2121

Query: 370  YNIKKKVSPRSQNITKNEKLAIKQLRENNDIIIRPADKGGKTVVMDKADYTQKMTSILNS 429
            Y++ +    R +   +    A+K+         RP D   +TV++ +        + L  
Sbjct: 2122 YSLYRLA--RYKETVEYLGKAVKR---------RPKD---RTVLLFRG------KAFLRL 2161

Query: 430  NDYEIIPGDPTKTIEESEKYGNLENESGQKHAASD-FTKAFADLDEAEKVDPNVADSYYQ 488
              +E   G   K      KY       GQ   A D +  A    + A  ++   A ++Y 
Sbjct: 2162 GRWENAYGMFDKLTAIDPKYVKGWYYKGQALLAKDLYEDALLAFETAISLEETCAGAWYN 2221

Query: 489  RGQIYCLFGQYEEALRNLDKTIALNPNF 516
            +G+      ++ EA+   ++ + L P+ 
Sbjct: 2222 KGRALGSLARHAEAVAAFNRALELQPDM 2249



 Score = 50.1 bits (118), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 96/425 (22%), Positives = 168/425 (39%), Gaps = 79/425 (18%)

Query: 143  AVVHLHAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNP 202
            A+VHL   +D  +AF   +    +DP   +++Y +G      G++++A+   D  +A++ 
Sbjct: 2667 ALVHLGRDTDAIQAF---ENTTAIDPRFMNAFYDKGLALARLGEHQDAVTAFDGVLAISA 2723

Query: 203  NFHVARAQRHFVVHKMIVPGDRERVEQSLKEFRNFVDTHS-----------------NVV 245
            +F  A  Q+   + ++      +R E++       +D +S                 NV 
Sbjct: 2724 SFVPALTQKGLSLFQL------QRYEEAASSLGAALDLNSGIFEAWYHQGLAYRHLGNVS 2777

Query: 246  EACTLFAQ-----------------VLVDQEDFDGAEEYFNRSIRVDPENASLYVHRAML 288
            EA   F Q                 VL  QE +D A   F  +I  D      Y +   L
Sbjct: 2778 EAIASFDQAISLDPRSFAVHYEKGLVLSGQEQWDAAVAEFRIAIECDGGKKEAY-YALGL 2836

Query: 289  MLQARGNVDEAIKLIEKAISIDKSCMFA--YETLGTIEVQRGRLEEAVKCFNKALPLARD 346
             L A     EA     K  ++D     A  YE L +  +++ R  EAV  F++ + +  D
Sbjct: 2837 ALHALEQFGEARDAFTKTAALDPGYADAHYYEGLSSEHLEQYR--EAVSSFDRTIAVIAD 2894

Query: 347  EA--------ELSHIYSLRDAAIAQMKVCERYNIKKKVSPRSQNITKNEKLAIKQLRENN 398
             A         L HI +  DAA A       +   ++  P +  I  +   A  +L +  
Sbjct: 2895 HAMAWYHKGLSLEHIGNDEDAADA-------FEHARRTEPDNPAILLSLGKARSRLGQF- 2946

Query: 399  DIIIRPADKGGKTVVMDKADYTQKMTSILN---SNDYEIIPGDPTKTIEESEKYGNLENE 455
            ++ IR  D     +  D     +K  ++ +     + E++ G  T+ + +  +   L   
Sbjct: 2947 EMAIRIYDHALTLLPSDGEFLLEKGIALAHLERHEEAEVVLGQSTERLPDRFEPPFLRGL 3006

Query: 456  S----GQ-KHAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTI 510
            S    G+   A   F KA A L+E    DP++   +Y +       G+ EEA+   DK +
Sbjct: 3007 SLMLTGRYDDAVRSFDKALA-LNE---TDPDI---WYHKAISLAHLGRAEEAVPAFDKVL 3059

Query: 511  ALNPN 515
             L P+
Sbjct: 3060 GLRPD 3064



 Score = 43.9 bits (102), Expect = 0.22,   Method: Compositional matrix adjust.
 Identities = 63/274 (22%), Positives = 114/274 (41%), Gaps = 24/274 (8%)

Query: 255 LVDQEDFDGAEEYFNRSIRVDPENASLYVHRAMLMLQARGNVDEAIKLIEKAISIDKSCM 314
           L D   F  A   F+R + + P  A  +  + + +    G  ++AI   + A+SI+ S  
Sbjct: 16  LYDLGRFQEAIVMFDRGLALYPRLAKAHYFKGIALYDL-GKFEDAIAAYDMAVSIEPSDP 74

Query: 315 FAYETLGTIEVQRGRLEEAVKCFNKALPLARDEAELSHIYSLRDAAIAQMK----VCERY 370
            A+        Q G+ EEA++  ++ L +  D AE    + L+  A+ ++         Y
Sbjct: 75  NAWYNKAATLAQVGKNEEALEACDRLLAIRYDNAE---AWILKGIALYELGRFTDAISAY 131

Query: 371 NIKKKVSPRSQNITKNEKLAIKQLRENNDIIIRPADKGGKTVVMDKADYTQKMTSILNSN 430
           +    + PR   +  N+ +A+  L  + + I    +K  + V      Y  K  S+    
Sbjct: 132 DHALMIDPRHAKVYYNKGIALADLGRHQEAIY-SYNKAIEIVPGYARAYYNKGISL---- 186

Query: 431 DYEIIPGDPTKTIEESEKYGNLENESGQKHAASDFTKAFADLDE-----AEKV---DPNV 482
            YE+  G+    +    +   L+ +         F  +  D +E     AEK    +P+ 
Sbjct: 187 -YEL--GNLDDALSAFNRAAELDPDDIWVWYYRSFILSKQDQNEFAAQSAEKFLAQEPDH 243

Query: 483 ADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNF 516
           AD +  RG      G+Y+EAL  L +  A+NP+ 
Sbjct: 244 ADIWAIRGMSLFKLGRYDEALDALRQATAINPDL 277


>gi|242214311|ref|XP_002472979.1| predicted protein [Postia placenta Mad-698-R]
 gi|220727951|gb|EED81856.1| predicted protein [Postia placenta Mad-698-R]
          Length = 944

 Score = 81.6 bits (200), Expect = 8e-13,   Method: Compositional matrix adjust.
 Identities = 59/222 (26%), Positives = 106/222 (47%), Gaps = 18/222 (8%)

Query: 140 IKRAVVHLHAASDFTKAFADLDEAEKVDPNVADSYYQRGQ----IYCLFGQYEEALRNLD 195
           +K A V++    D  K F   +EA K +P+  D YY RGQ    I+ +  +++EA  N  
Sbjct: 26  VKIASVYMEQG-DPKKTFECFEEAIKHNPDDPDIYYHRGQGIYRIFFIMNEFKEAADNYT 84

Query: 196 KTIALNPNFHVARAQRHFVVHKMIVPGDRERVEQSLKEFRNFVDTHSNVVEACTLFAQVL 255
           K+  L+  F  +  Q     +K            S+  FR  +       E    + ++L
Sbjct: 85  KSTQLDDEFVFSHIQLAVAQYKA------GNTANSMATFRRTLKAFPQRSEPHNYYGELL 138

Query: 256 VDQEDFDGAEEYFNRSIRVD-------PENASLYVHRAMLMLQARGNVDEAIKLIEKAIS 308
           +DQ+ F  A + F R+I ++       P NA  +V++ + + Q + ++  A +  ++A+ 
Sbjct: 139 LDQQRFGDAVDKFERAIEIEQERSKPPPINALPHVNKGLALFQWKQDIAAAEECCQEALK 198

Query: 309 IDKSCMFAYETLGTIEVQRGRLEEAVKCFNKALPLARDEAEL 350
           +D  C  A  TL  + +Q+G+++ A+  F +   LAR E EL
Sbjct: 199 LDPECEAAVATLAQLSLQQGKIDIAMXMFKRQADLARSEPEL 240


>gi|254412549|ref|ZP_05026323.1| tetratricopeptide repeat domain protein [Coleofasciculus
           chthonoplastes PCC 7420]
 gi|196180859|gb|EDX75849.1| tetratricopeptide repeat domain protein [Coleofasciculus
           chthonoplastes PCC 7420]
          Length = 884

 Score = 81.6 bits (200), Expect = 9e-13,   Method: Compositional matrix adjust.
 Identities = 87/390 (22%), Positives = 153/390 (39%), Gaps = 72/390 (18%)

Query: 145 VHLHAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNF 204
           + L       +A A  D+A +  P+  +++Y RG      G+ EEA+ + DK +   P++
Sbjct: 432 IALRKLGRLEEAIASFDKALQFKPDKHEAWYNRGSALDELGRIEEAIASFDKALQFKPDY 491

Query: 205 HVARAQRHFVVHKMIVPGDRERVEQSLKEFRN-------FVDTHSNVVEACTLFAQVLVD 257
           H A   R   + K+       R+E+++  +          +     + EA T F + L  
Sbjct: 492 HQAWYNRGIALDKL------GRIEEAIASYDQAWYNRGIALRKLGQLEEAITCFDKAL-- 543

Query: 258 QEDFDGAEEYFNRSIRVDPENASLYVHRAMLMLQARGNVDEAIKLIEKAISIDKSCMFAY 317
           Q   D  + ++NR               A+  L   G ++E I   +KA+   + C  A+
Sbjct: 544 QFKLDDHQAWYNRG-------------NALFDL---GRLEEGIASFDKALQFKRDCHQAW 587

Query: 318 ETLGTIEVQRGRLEEAVKCFNKALPLARDEAELSHIYSLRDAAIAQMKVCER----YNIK 373
              G    + G+LEEA+  ++KAL    D   L   ++ R  A+  +   E     Y+  
Sbjct: 588 NNRGIALKKLGQLEEAIASYDKALQFKPD---LHQAWNNRGNALFNLGQLEEAIASYDKA 644

Query: 374 KKVSPRSQNITKNEKLAIKQLRENNDIIIRPADKGGKTVVMDKADYTQKMTSILNSNDYE 433
            +  P       +  +A+  L +  + I               A Y + +         +
Sbjct: 645 LQFKPDDPEAWYSRGIALGNLGQLEEAI---------------ASYDKAL---------Q 680

Query: 434 IIPGDPTKTIEESEKYGNLENESGQKHAASDFTKAFADLDEAEKVDPNVADSYYQRGQIY 493
             P DP          GNL    GQ        +A A  D A +   +  +++Y RG   
Sbjct: 681 FKPDDPEAWYSRGIALGNL----GQ------LEEAIASYDNALQFKSDDPEAWYNRGNAL 730

Query: 494 CLFGQYEEALRNLDKTIALNPNFHVARAQR 523
              GQ +EA+ + DK + + P++H AR  R
Sbjct: 731 DGLGQLKEAIASYDKALQIKPDYHQARYNR 760



 Score = 63.2 bits (152), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 68/355 (19%), Positives = 142/355 (40%), Gaps = 50/355 (14%)

Query: 174 YYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQRHFVVHKMIVPGDRERVEQSLKE 233
           + ++G      G   +A+   +K + + P+ H A   R   +  +       R+E+++  
Sbjct: 189 WLKQGNQQFRLGDLVDAIVCWEKALDITPDSHNAWNNRGIALRNL------GRIEEAIAS 242

Query: 234 FRNFVDTHSNVVEACTLFAQVLVDQEDFDGAEEYFNRSIRVDPENASLYVHRAMLMLQAR 293
           F   +    +  +A       L +    + A   ++++++  P++   + +R   M +  
Sbjct: 243 FDKALQFKRDCHQAWNNRGNALFNLGRIEEAIASYDKALQFKPDDYETWCNRGYAMDEL- 301

Query: 294 GNVDEAIKLIEKAISIDKSCMFAYETLGTIEVQRGRLEEAVKCFNKALPLARD--EAELS 351
           G ++EAI   E+A+   + C  A++  G  + + GRL +A+  ++KAL    D  +A  +
Sbjct: 302 GEIEEAIASFEQALQFKRDCHQAWKNRGNSQSKLGRLFKAIASYDKALQFKPDYHQAWYN 361

Query: 352 HIYSLRDAAIAQMKVCERYNIKKKVSPRSQNITKNEKLAIKQLRENNDIIIRPADKGGKT 411
              +LR     +  +   Y+   +  P    +  +  +A+++L    + I          
Sbjct: 362 RGIALRKLGRLEEAIAS-YDNALQFKPEQHEVWLDRSIALRKLGRLEEAI---------- 410

Query: 412 VVMDKADYTQKMTSILNSNDYEIIPGDPTKTIEES---EKYGNLENESGQKHAASDFTKA 468
                A Y + +         +  P D            K G LE             +A
Sbjct: 411 -----ASYDKAL---------QFEPDDHQACYNRGIALRKLGRLE-------------EA 443

Query: 469 FADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQR 523
            A  D+A +  P+  +++Y RG      G+ EEA+ + DK +   P++H A   R
Sbjct: 444 IASFDKALQFKPDKHEAWYNRGSALDELGRIEEAIASFDKALQFKPDYHQAWYNR 498



 Score = 58.2 bits (139), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 71/366 (19%), Positives = 152/366 (41%), Gaps = 18/366 (4%)

Query: 151 SDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQ 210
            +  +A A  ++A +   +   ++  RG      G+  +A+ + DK +   P++H A   
Sbjct: 302 GEIEEAIASFEQALQFKRDCHQAWKNRGNSQSKLGRLFKAIASYDKALQFKPDYHQAWYN 361

Query: 211 RHFVVHKMIVPGDRERVEQSLKEFRNFVDTHSNVVEACTLFAQVLVDQEDFDGAEEYFNR 270
           R   + K+       R+E+++  + N +       E     +  L      + A   +++
Sbjct: 362 RGIALRKL------GRLEEAIASYDNALQFKPEQHEVWLDRSIALRKLGRLEEAIASYDK 415

Query: 271 SIRVDPENASLYVHRAMLMLQARGNVDEAIKLIEKAISIDKSCMFAYETLGTIEVQRGRL 330
           +++ +P++     +R  + L+  G ++EAI   +KA+        A+   G+   + GR+
Sbjct: 416 ALQFEPDDHQACYNRG-IALRKLGRLEEAIASFDKALQFKPDKHEAWYNRGSALDELGRI 474

Query: 331 EEAVKCFNKALPLARDEAELSHIYSLRDAAIAQMKVCERYNIKKKVSPRSQNITKNEKLA 390
           EEA+  F+KAL    D       +  R  A+ ++       I++ ++   Q    N  +A
Sbjct: 475 EEAIASFDKALQFKPD---YHQAWYNRGIALDKLG-----RIEEAIASYDQ-AWYNRGIA 525

Query: 391 IKQLRENNDIIIRPADKGGKTVVMDKADYTQKMTSILNSNDYEIIPGDPTKTIEESEKYG 450
           +++L +  + I    DK  +  + D   +  +  ++ +    E       K ++      
Sbjct: 526 LRKLGQLEEAIT-CFDKALQFKLDDHQAWYNRGNALFDLGRLEEGIASFDKALQFKRDCH 584

Query: 451 NLENESG-QKHAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKT 509
              N  G          +A A  D+A +  P++  ++  RG      GQ EEA+ + DK 
Sbjct: 585 QAWNNRGIALKKLGQLEEAIASYDKALQFKPDLHQAWNNRGNALFNLGQLEEAIASYDKA 644

Query: 510 IALNPN 515
           +   P+
Sbjct: 645 LQFKPD 650



 Score = 52.8 bits (125), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 56/237 (23%), Positives = 102/237 (43%), Gaps = 12/237 (5%)

Query: 117 AIEDLTQLVED-TSVDPKIKVNAHIKRAVVH----LHAASDFTKAFADLDEAEKVDPNVA 171
           A++ L QL E   S D  ++    + +A  +    L       +A A  D+A +  P+  
Sbjct: 593 ALKKLGQLEEAIASYDKALQFKPDLHQAWNNRGNALFNLGQLEEAIASYDKALQFKPDDP 652

Query: 172 DSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQRHFVVHKMIVPGDRERVEQSL 231
           +++Y RG      GQ EEA+ + DK +   P+   A   R       I  G+  ++E+++
Sbjct: 653 EAWYSRGIALGNLGQLEEAIASYDKALQFKPDDPEAWYSRG------IALGNLGQLEEAI 706

Query: 232 KEFRNFVDTHSNVVEACTLFAQVLVDQEDFDGAEEYFNRSIRVDPENASLYVHRAMLMLQ 291
             + N +   S+  EA       L        A   +++++++ P+      +R +   +
Sbjct: 707 ASYDNALQFKSDDPEAWYNRGNALDGLGQLKEAIASYDKALQIKPDYHQARYNRGIAR-R 765

Query: 292 ARGNVDEAIKLIEKAISIDKSCMFAYETLGTIEVQRGRLEEAVKCFNKALPLARDEA 348
             G ++EAI   + A+        A+   G    + GR EEA+   NKAL +  D A
Sbjct: 766 KLGRIEEAIASYDNALKFKTDDHEAWYNRGFALYKLGRFEEAIISCNKALEIKLDYA 822



 Score = 50.8 bits (120), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 67/372 (18%), Positives = 143/372 (38%), Gaps = 42/372 (11%)

Query: 145 VHLHAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNF 204
           + L       +A    D+A +   +   ++Y RG      G+ EE + + DK +    + 
Sbjct: 524 IALRKLGQLEEAITCFDKALQFKLDDHQAWYNRGNALFDLGRLEEGIASFDKALQFKRDC 583

Query: 205 HVARAQRHFVVHKMIVPGDRERVEQSLKEFRNFVDTHSNVVEACTLFAQVLVDQEDFDGA 264
           H A   R   + K+       ++E+++  +   +    ++ +A       L +    + A
Sbjct: 584 HQAWNNRGIALKKL------GQLEEAIASYDKALQFKPDLHQAWNNRGNALFNLGQLEEA 637

Query: 265 EEYFNRSIRVDPENASLYVHRAMLMLQARGNVDEAIKLIEKAISIDKSCMFAYETLGTIE 324
              ++++++  P++   +  R  + L   G ++EAI   +KA+        A+ + G   
Sbjct: 638 IASYDKALQFKPDDPEAWYSRG-IALGNLGQLEEAIASYDKALQFKPDDPEAWYSRGIAL 696

Query: 325 VQRGRLEEAVKCFNKALPLARDEAELSHIYSLRDAAIAQMK-VCERYNIKKKVSPRSQNI 383
              G+LEEA+  ++ AL    D+ E  +        + Q+K     Y+   ++ P     
Sbjct: 697 GNLGQLEEAIASYDNALQFKSDDPEAWYNRGNALDGLGQLKEAIASYDKALQIKPDYHQA 756

Query: 384 TKNEKLAIKQLRENNDIIIRPADKGGKTVVMDKADYTQKMTSILNSNDYEIIPGDPTKTI 443
             N  +A ++L    + I               A Y   +     ++D+E          
Sbjct: 757 RYNRGIARRKLGRIEEAI---------------ASYDNALK--FKTDDHEA--------- 790

Query: 444 EESEKYGNLENESGQKHAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEAL 503
                     N     +    F +A    ++A ++  + A+++Y++     L  Q + AL
Sbjct: 791 --------WYNRGFALYKLGRFEEAIISCNKALEIKLDYANAFYKKACYLALQNQIDLAL 842

Query: 504 RNLDKTIALNPN 515
             L + I LNP+
Sbjct: 843 EKLQQAITLNPD 854



 Score = 48.9 bits (115), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 53/238 (22%), Positives = 99/238 (41%), Gaps = 12/238 (5%)

Query: 117 AIEDLTQLVED-TSVDPKIKVNAHIKRAV----VHLHAASDFTKAFADLDEAEKVDPNVA 171
           A+ DL +L E   S D  ++      +A     + L       +A A  D+A +  P++ 
Sbjct: 559 ALFDLGRLEEGIASFDKALQFKRDCHQAWNNRGIALKKLGQLEEAIASYDKALQFKPDLH 618

Query: 172 DSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQRHFVVHKMIVPGDRERVEQSL 231
            ++  RG      GQ EEA+ + DK +   P+   A   R       I  G+  ++E+++
Sbjct: 619 QAWNNRGNALFNLGQLEEAIASYDKALQFKPDDPEAWYSRG------IALGNLGQLEEAI 672

Query: 232 KEFRNFVDTHSNVVEACTLFAQVLVDQEDFDGAEEYFNRSIRVDPENASLYVHRAMLMLQ 291
             +   +    +  EA       L +    + A   ++ +++   ++   + +R    L 
Sbjct: 673 ASYDKALQFKPDDPEAWYSRGIALGNLGQLEEAIASYDNALQFKSDDPEAWYNRGN-ALD 731

Query: 292 ARGNVDEAIKLIEKAISIDKSCMFAYETLGTIEVQRGRLEEAVKCFNKALPLARDEAE 349
             G + EAI   +KA+ I      A    G    + GR+EEA+  ++ AL    D+ E
Sbjct: 732 GLGQLKEAIASYDKALQIKPDYHQARYNRGIARRKLGRIEEAIASYDNALKFKTDDHE 789


>gi|166362921|ref|YP_001655194.1| hypothetical protein MAE_01800, partial [Microcystis aeruginosa
           NIES-843]
 gi|166085294|dbj|BAG00002.1| tetratricopeptide repeat protein [Microcystis aeruginosa NIES-843]
          Length = 594

 Score = 81.6 bits (200), Expect = 9e-13,   Method: Compositional matrix adjust.
 Identities = 82/377 (21%), Positives = 150/377 (39%), Gaps = 48/377 (12%)

Query: 151 SDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQ 210
            DF  A A  D+A ++ P+  +++Y RG      G++ EA+ + D+ + + P+ H A   
Sbjct: 164 GDFIGAIASYDKALEIKPDDHEAWYNRGIALGNLGRFAEAIASYDRALEIKPDLHQAWYN 223

Query: 211 RHFVVHKMIVPGDRERVEQSLKEFRNFVDTHSNVVEACTLFAQVLVDQEDFDGAEEYFNR 270
           R       I  G+  R+E+++  +   ++   +  EA       L +   F  A   +++
Sbjct: 224 RG------IALGNLGRLEEAIASYDQALEIKPDQHEAWYNRGIALGNLGRFAEAIASYDK 277

Query: 271 SIRVDPENASLYVHRAMLMLQARGNVDEAIKLIEKAISIDKSCMFAYETLGTIEVQRGRL 330
           ++ + P++   + +R  + L   G   EAI   ++A+ I      A+   G      GRL
Sbjct: 278 ALEIKPDDHEAWYNRG-IALGNLGRFAEAIASYDRALEIKPDLHQAWYNRGIALGNLGRL 336

Query: 331 EEAVKCFNKALPLARDEAELSHIYSLRDAAIAQM----KVCERYNIKKKVSPRSQNITKN 386
           EEA+  +++AL +  D+ E    +  R  A+  +    +    Y+   ++ P        
Sbjct: 337 EEAIASYDQALEIKPDQHE---AWYNRGIALGNLGRFAEAIASYDKALEIKPDDHQAWYG 393

Query: 387 EKLAIKQLRENNDIIIRPADKGGKTVVMDKADYTQKMTSILNSNDYEIIPGDPTKTIEES 446
              A+  L    + I               A Y + +         EI P          
Sbjct: 394 RGFALDDLGRFAEAI---------------ASYDKAL---------EIKPDYHQAWYNRG 429

Query: 447 EKYGNLENESGQKHAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNL 506
              GNL            F +A A  D A +  P++ +++  RG      G+ EEAL + 
Sbjct: 430 FALGNL----------GRFEQAIASYDRALEFKPDLHEAWVNRGVALGNLGRLEEALASY 479

Query: 507 DKTIALNPNFHVARAQR 523
           DK +   P+ H A   R
Sbjct: 480 DKALEFKPDLHEAWNNR 496



 Score = 72.0 bits (175), Expect = 8e-10,   Method: Compositional matrix adjust.
 Identities = 81/377 (21%), Positives = 155/377 (41%), Gaps = 18/377 (4%)

Query: 153 FTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQRH 212
           F +A A  D A ++ P++  ++Y RG      G+ EEA+ + D+ + + P+ H A   R 
Sbjct: 200 FAEAIASYDRALEIKPDLHQAWYNRGIALGNLGRLEEAIASYDQALEIKPDQHEAWYNRG 259

Query: 213 FVVHKMIVPGDRERVEQSLKEFRNFVDTHSNVVEACTLFAQVLVDQEDFDGAEEYFNRSI 272
                 I  G+  R  +++  +   ++   +  EA       L +   F  A   ++R++
Sbjct: 260 ------IALGNLGRFAEAIASYDKALEIKPDDHEAWYNRGIALGNLGRFAEAIASYDRAL 313

Query: 273 RVDPENASLYVHRAMLMLQARGNVDEAIKLIEKAISIDKSCMFAYETLGTIEVQRGRLEE 332
            + P+    + +R +  L   G ++EAI   ++A+ I      A+   G      GR  E
Sbjct: 314 EIKPDLHQAWYNRGI-ALGNLGRLEEAIASYDQALEIKPDQHEAWYNRGIALGNLGRFAE 372

Query: 333 AVKCFNKALPLARD--EAELSHIYSLRDAAIAQMKVCERYNIKKKVSPRSQNITKNEKLA 390
           A+  ++KAL +  D  +A     ++L D       +   Y+   ++ P       N   A
Sbjct: 373 AIASYDKALEIKPDDHQAWYGRGFALDDLGRFAEAIAS-YDKALEIKPDYHQAWYNRGFA 431

Query: 391 IKQLRENNDIIIRPADKGGKTVVMDKADYTQKMTSILNSNDYEIIPGDPTKTIEESEKYG 450
           +  L      I    D+  +        +  +  ++ N    E       K +E      
Sbjct: 432 LGNLGRFEQAIA-SYDRALEFKPDLHEAWVNRGVALGNLGRLEEALASYDKALEFKPDLH 490

Query: 451 NLENESGQKHAASD----FTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNL 506
              N  G    A D    F +A A  D+A ++ P++ +++  RG       ++E+AL + 
Sbjct: 491 EAWNNRG---IALDNLRRFEQALASYDKALEIKPDLHEAWNNRGIALANLRRFEQALASY 547

Query: 507 DKTIALNPNFHVARAQR 523
           D+ + + P+FH A   R
Sbjct: 548 DRALEIKPDFHQAWTNR 564



 Score = 58.9 bits (141), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 64/289 (22%), Positives = 117/289 (40%), Gaps = 44/289 (15%)

Query: 260 DFDGAEEYFNRSIRVDPENASLYVHRAMLMLQARGNVDEAIKLIEKAISIDKSCMFAYET 319
           DF GA   +++++ + P++   + +R +  L   G   EAI   ++A+ I      A+  
Sbjct: 165 DFIGAIASYDKALEIKPDDHEAWYNRGI-ALGNLGRFAEAIASYDRALEIKPDLHQAWYN 223

Query: 320 LGTIEVQRGRLEEAVKCFNKALPLARDEAELSHIYSLRDAAIAQM----KVCERYNIKKK 375
            G      GRLEEA+  +++AL +  D+ E    +  R  A+  +    +    Y+   +
Sbjct: 224 RGIALGNLGRLEEAIASYDQALEIKPDQHE---AWYNRGIALGNLGRFAEAIASYDKALE 280

Query: 376 VSPRSQNITKNEKLAIKQLRENNDII--------IRPADKGGKTVVMDKADYTQ------ 421
           + P       N  +A+  L    + I        I+P         + +A Y +      
Sbjct: 281 IKPDDHEAWYNRGIALGNLGRFAEAIASYDRALEIKPD--------LHQAWYNRGIALGN 332

Query: 422 --KMTSILNSND--YEIIPGDPTKTIEESEKYGNLENESGQKHAASDFTKAFADLDEAEK 477
             ++   + S D   EI P             GNL            F +A A  D+A +
Sbjct: 333 LGRLEEAIASYDQALEIKPDQHEAWYNRGIALGNL----------GRFAEAIASYDKALE 382

Query: 478 VDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQRHFV 526
           + P+   ++Y RG      G++ EA+ + DK + + P++H A   R F 
Sbjct: 383 IKPDDHQAWYGRGFALDDLGRFAEAIASYDKALEIKPDYHQAWYNRGFA 431



 Score = 42.0 bits (97), Expect = 0.93,   Method: Compositional matrix adjust.
 Identities = 20/66 (30%), Positives = 35/66 (53%)

Query: 458 QKHAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFH 517
           QK    DF  A A  D+A ++ P+  +++Y RG      G++ EA+ + D+ + + P+ H
Sbjct: 159 QKLINGDFIGAIASYDKALEIKPDDHEAWYNRGIALGNLGRFAEAIASYDRALEIKPDLH 218

Query: 518 VARAQR 523
            A   R
Sbjct: 219 QAWYNR 224


>gi|434389920|ref|YP_007100354.1| hypothetical protein Cha6605_6437 [Chamaesiphon minutus PCC 6605]
 gi|428021916|gb|AFY97252.1| hypothetical protein Cha6605_6437 [Chamaesiphon minutus PCC 6605]
          Length = 1126

 Score = 81.6 bits (200), Expect = 9e-13,   Method: Compositional matrix adjust.
 Identities = 82/378 (21%), Positives = 158/378 (41%), Gaps = 22/378 (5%)

Query: 146 HLHAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFH 205
           +L     + +  A+  +A K+ P+    +Y +G      GQ EE++ + ++ I + PNFH
Sbjct: 100 NLFGLGRYEEEIANYKQAIKIYPDYFQPWYYQGIALGYLGQTEESIASFERAIEIAPNFH 159

Query: 206 VARAQRHFVVHKMIVPGDRERVEQSLKEFRNFVDTHSNVVEACTLFAQVLVDQEDFDGAE 265
                +   +  +       R E ++  F   ++   N  +A       L +   F+ A 
Sbjct: 160 AGWYGQGIELDNL------GRFEDAVSNFNRAIEIEPNFYQAWFKRGFSLGNLNKFEEAV 213

Query: 266 EYFNRSIRVDPENASLYVHRAMLMLQARGNVDEAIKLIEKAISIDKSCMFAYETLGTIEV 325
             FNR++ ++P ++  +  R + + Q  G  ++AI   E+AI ID      +   G  ++
Sbjct: 214 SNFNRAVEIEPNHSPSWHCRGLALGQI-GRYEDAIYSFERAIEIDSDEPEIWRDRGFAQI 272

Query: 326 QRGRLEEAVKCFNKALPLARDEAELSHIYSLRDAAIAQMKVCERYNIKKKVSPRSQNITK 385
              R EEA+  + + L +  ++    +I+ LR      +K  ++Y   +    R+  I  
Sbjct: 273 NLDRYEEAIFSYERYLNIQINDC---NIWFLRGVL---LKYIDKYEEAETSLDRAIQINP 326

Query: 386 N-------EKLAIKQLRENNDIIIRPADKGGKTVVMDKADYTQKMTSILNSNDYEIIPGD 438
           +         L    L  N D I            + +A + + +T +     Y+     
Sbjct: 327 DFFEAWCERGLVCFFLARNQDSIASYDRAIELNADLHEAWFGKGLT-LKTIGQYKNAIAS 385

Query: 439 PTKTIE-ESEKYGNLENESGQKHAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFG 497
             + IE + + Y    N      A S + +A A+ D A +++P+    +Y RG      G
Sbjct: 386 YDRAIEIKPDYYEAWSNRGSALEAISKYKEAIANYDRAIEINPDFHLVWYNRGISLEHLG 445

Query: 498 QYEEALRNLDKTIALNPN 515
           QY EA+ N ++ I L P+
Sbjct: 446 QYSEAIPNFERAIKLKPD 463



 Score = 72.0 bits (175), Expect = 8e-10,   Method: Compositional matrix adjust.
 Identities = 87/371 (23%), Positives = 158/371 (42%), Gaps = 42/371 (11%)

Query: 171 ADSYYQRGQIYCLFG--QYEEALRNLDKTIALNPNFHVARAQRHFVVHKMIVPGDRERVE 228
           A++++ RG  Y LFG  +YEE + N  + I + P++           ++ I  G   + E
Sbjct: 91  AETWFSRG--YNLFGLGRYEEEIANYKQAIKIYPDYFQP------WYYQGIALGYLGQTE 142

Query: 229 QSLKEFRNFVDTHSNVVEACTLFAQVLVDQEDFDGAEEYFNRSIRVDPENASLYVHRAML 288
           +S+  F   ++   N           L +   F+ A   FNR+I ++P     +  R   
Sbjct: 143 ESIASFERAIEIAPNFHAGWYGQGIELDNLGRFEDAVSNFNRAIEIEPNFYQAWFKRGFS 202

Query: 289 MLQARGNVD---EAIKLIEKAISIDKSCMFAYETLGTIEVQRGRLEEAVKCFNKALPLAR 345
           +    GN++   EA+    +A+ I+ +   ++   G    Q GR E+A+  F +A+ +  
Sbjct: 203 L----GNLNKFEEAVSNFNRAVEIEPNHSPSWHCRGLALGQIGRYEDAIYSFERAIEIDS 258

Query: 346 DEAELSHIYSLRDAAIAQMKVCERYNIKKKVSPRSQNITKNEKLAIKQLRENNDIIIRPA 405
           DE E+      RD   AQ+ + +RY        R  NI  N+   I  LR    ++++  
Sbjct: 259 DEPEI-----WRDRGFAQINL-DRYEEAIFSYERYLNIQIND-CNIWFLR---GVLLKYI 308

Query: 406 DKGGKT-VVMDKA-----DYTQKMTS------ILNSNDYEIIPGDPTKTIE-ESEKYGNL 452
           DK  +    +D+A     D+ +           L  N   I   D  + IE  ++ +   
Sbjct: 309 DKYEEAETSLDRAIQINPDFFEAWCERGLVCFFLARNQDSIASYD--RAIELNADLHEAW 366

Query: 453 ENESGQKHAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIAL 512
             +         +  A A  D A ++ P+  +++  RG       +Y+EA+ N D+ I +
Sbjct: 367 FGKGLTLKTIGQYKNAIASYDRAIEIKPDYYEAWSNRGSALEAISKYKEAIANYDRAIEI 426

Query: 513 NPNFHVARAQR 523
           NP+FH+    R
Sbjct: 427 NPDFHLVWYNR 437



 Score = 58.9 bits (141), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 76/384 (19%), Positives = 164/384 (42%), Gaps = 15/384 (3%)

Query: 145 VHLHAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNF 204
           + L     F  A ++ + A +++PN   ++++RG       ++EEA+ N ++ + + PN 
Sbjct: 167 IELDNLGRFEDAVSNFNRAIEIEPNFYQAWFKRGFSLGNLNKFEEAVSNFNRAVEIEPNH 226

Query: 205 HVARAQRHFVVHKMIVPGDRERVEQSLKEFRNFVDTHSNVVEAC--TLFAQVLVDQEDFD 262
             +   R   +      G   R E ++  F   ++  S+  E      FAQ+ +D+  ++
Sbjct: 227 SPSWHCRGLAL------GQIGRYEDAIYSFERAIEIDSDEPEIWRDRGFAQINLDR--YE 278

Query: 263 GAEEYFNRSIRVDPENASLYVHRAMLMLQARGNVDEAIKLIEKAISIDKSCMFAYETLGT 322
            A   + R + +   + +++  R +L L+     +EA   +++AI I+     A+   G 
Sbjct: 279 EAIFSYERYLNIQINDCNIWFLRGVL-LKYIDKYEEAETSLDRAIQINPDFFEAWCERGL 337

Query: 323 IEVQRGRLEEAVKCFNKALPLARDEAELSHIYSLRDAAIAQMK-VCERYNIKKKVSPRSQ 381
           +     R ++++  +++A+ L  D  E      L    I Q K     Y+   ++ P   
Sbjct: 338 VCFFLARNQDSIASYDRAIELNADLHEAWFGKGLTLKTIGQYKNAIASYDRAIEIKPDYY 397

Query: 382 NITKNEKLAIKQLRENNDIIIRPADKGGKTVVMDKADYTQKMTSILNSNDY-EIIPGDPT 440
               N   A++ + +  + I    D+  +        +  +  S+ +   Y E IP    
Sbjct: 398 EAWSNRGSALEAISKYKEAIAN-YDRAIEINPDFHLVWYNRGISLEHLGQYSEAIPNFER 456

Query: 441 KTIEESEKYGNLENESGQKHAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYE 500
               + + Y +L            + +A  +L  A ++ P+ +D++   G +    GQY+
Sbjct: 457 AIKLKPDDYQSLFRLGVALDNLGWYKEAIINLTLAIEIKPDFSDAWCSLGVVLENLGQYK 516

Query: 501 EALRNLDKTIALNP-NFHVARAQR 523
           EA+ + +++I L P N +   A R
Sbjct: 517 EAIASYEQSIKLKPDNLYQVWANR 540



 Score = 56.6 bits (135), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 56/242 (23%), Positives = 99/242 (40%), Gaps = 49/242 (20%)

Query: 129 SVDPKIKVNAHIKRAV----VHLHAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLF 184
           S D  I++NA +  A     + L     +  A A  D A ++ P+  +++  RG      
Sbjct: 351 SYDRAIELNADLHEAWFGKGLTLKTIGQYKNAIASYDRAIEIKPDYYEAWSNRGSALEAI 410

Query: 185 GQYEEALRNLDKTIALNPNFHVARAQRHFVVHKMIVPGDRERVEQSLKEFRNFVDTHSNV 244
            +Y+EA+ N D+ I +NP+FH+    R                  SL+    + +   N 
Sbjct: 411 SKYKEAIANYDRAIEINPDFHLVWYNRGI----------------SLEHLGQYSEAIPN- 453

Query: 245 VEACTLFAQVLVDQEDFDGAEEYFNRSIRVDPEN-ASLYVHRAMLMLQARGNVDEAIKLI 303
                                  F R+I++ P++  SL+  R  + L   G   EAI  +
Sbjct: 454 -----------------------FERAIKLKPDDYQSLF--RLGVALDNLGWYKEAIINL 488

Query: 304 EKAISIDKSCMFAYETLGTIEVQRGRLEEAVKCFNKALPLARDEAELSHIYSLRDAAIAQ 363
             AI I      A+ +LG +    G+ +EA+  + +++ L  D   L  +++ R AA  +
Sbjct: 489 TLAIEIKPDFSDAWCSLGVVLENLGQYKEAIASYEQSIKLKPD--NLYQVWANRGAAYGR 546

Query: 364 MK 365
            K
Sbjct: 547 FK 548


>gi|428305223|ref|YP_007142048.1| hypothetical protein Cri9333_1649 [Crinalium epipsammum PCC 9333]
 gi|428246758|gb|AFZ12538.1| Tetratricopeptide TPR_1 repeat-containing protein [Crinalium
           epipsammum PCC 9333]
          Length = 832

 Score = 81.6 bits (200), Expect = 9e-13,   Method: Compositional matrix adjust.
 Identities = 85/371 (22%), Positives = 164/371 (44%), Gaps = 22/371 (5%)

Query: 153 FTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQRH 212
           + +A A  D+A KV P+   ++  +G      G+YEEAL   D+T+ + P+ H A   + 
Sbjct: 374 YEEAIAAFDQALKVKPDDHQAWNNKGNALGDLGRYEEALAAFDQTLKVKPDQHQAWNNKG 433

Query: 213 FVVHKMIVPGDRERVEQSLKEFRNFV----DTHSNVVEACTLFAQVLVDQEDFDGAEEYF 268
             +      GD  R E++L  F   +    D H           ++  D+E    A   F
Sbjct: 434 NAL------GDLGRYEEALAAFDQALKVKPDQHQAWNNKGIALGKLGCDEE----ALAAF 483

Query: 269 NRSIRVDPENASLYVHRAMLMLQARGNVDEAIKLIEKAISIDKSCMFAYETLGTIEVQRG 328
           +++++V P+    + ++  + L   G  +EA+   ++A+ +      A+   G    + G
Sbjct: 484 DQALKVKPDQHQAWNNKG-IALGKLGCDEEALAAFDQALKVKSDQHQAWNNKGIALGKLG 542

Query: 329 RLEEAVKCFNKALPLARD--EAELSHIYSLRDAAIAQMKVCERYNIKKKVSPRSQNITKN 386
           R EEA+  +NKAL +  D  EA  +   +L +    Q +    ++   KV P    + KN
Sbjct: 543 RDEEALAAYNKALKVKPDQHEAWKNKGNTLVNLGCYQ-EALAAFDQALKVKPDQHQVWKN 601

Query: 387 EKLAIKQLRENNDIIIRPADKGGKTVVMDKADYTQKMTSILNSNDYE--IIPGDPTKTIE 444
           + + +  L    + ++   D+  K    D   ++ K   ++N   Y+  +I  D T  + 
Sbjct: 602 KGIVLVNLGCYQEALV-AFDQALKVKPNDHEPWSNKGIVLVNLGRYQEALIAFDQTLKV- 659

Query: 445 ESEKYGNLENESGQKHAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALR 504
           + ++Y    N+         + +A    D+  KV P+  + +  +G      G+Y+EAL 
Sbjct: 660 KPDQYEVWNNKGIVLVNLGRYQEAITAFDQTLKVKPDQYEVWNNKGIALGKLGRYQEALA 719

Query: 505 NLDKTIALNPN 515
             D+T+ + P+
Sbjct: 720 AFDQTLKVKPD 730



 Score = 68.9 bits (167), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 82/413 (19%), Positives = 165/413 (39%), Gaps = 38/413 (9%)

Query: 147 LHAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHV 206
           L+AA ++  A   LD+A KV P+   ++  +G      G YEEAL   D+ + + P+ H 
Sbjct: 232 LYAAKEYAVAITALDQALKVKPDDHQAWQNKGVALGNLGHYEEALAAFDQALKVKPDQHQ 291

Query: 207 ARAQRHFVV----------------------------HKMIVPGDRERVEQSLKEFRNFV 238
           A   +   +                            +K  V G   R E++L  F   +
Sbjct: 292 AWYNKGNTLVNLERYEEALAAFDQALKVKPDDHQAWNNKGNVLGKLGRYEEALAAFDQAL 351

Query: 239 DTHSNVVEACTLFAQVLVDQEDFDGAEEYFNRSIRVDPENASLYVHRAMLMLQARGNVDE 298
              S+  +A       L     ++ A   F+++++V P++   + ++    L   G  +E
Sbjct: 352 KVKSDQHQAWNNKGNALGKLGRYEEAIAAFDQALKVKPDDHQAWNNKGN-ALGDLGRYEE 410

Query: 299 AIKLIEKAISIDKSCMFAYETLGTIEVQRGRLEEAVKCFNKALPLARDEAELSHIYSLRD 358
           A+   ++ + +      A+   G      GR EEA+  F++AL +  D+      ++ + 
Sbjct: 411 ALAAFDQTLKVKPDQHQAWNNKGNALGDLGRYEEALAAFDQALKVKPDQ---HQAWNNKG 467

Query: 359 AAIAQMKVCER----YNIKKKVSPRSQNITKNEKLAIKQLRENNDIIIRPADKGGKTVVM 414
            A+ ++   E     ++   KV P       N+ +A+ +L  + + +    D+  K    
Sbjct: 468 IALGKLGCDEEALAAFDQALKVKPDQHQAWNNKGIALGKLGCDEEALA-AFDQALKVKSD 526

Query: 415 DKADYTQKMTSILN-SNDYEIIPGDPTKTIEESEKYGNLENESGQKHAASDFTKAFADLD 473
               +  K  ++     D E +         + +++   +N+         + +A A  D
Sbjct: 527 QHQAWNNKGIALGKLGRDEEALAAYNKALKVKPDQHEAWKNKGNTLVNLGCYQEALAAFD 586

Query: 474 EAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQRHFV 526
           +A KV P+    +  +G +    G Y+EAL   D+ + + PN H   + +  V
Sbjct: 587 QALKVKPDQHQVWKNKGIVLVNLGCYQEALVAFDQALKVKPNDHEPWSNKGIV 639



 Score = 63.9 bits (154), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 72/362 (19%), Positives = 149/362 (41%), Gaps = 42/362 (11%)

Query: 156 AFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQRHFVV 215
           A A  D+A KV P+   ++  +G      G  EEAL   D+ + +  + H A        
Sbjct: 479 ALAAFDQALKVKPDQHQAWNNKGIALGKLGCDEEALAAFDQALKVKSDQHQAWN------ 532

Query: 216 HKMIVPGDRERVEQSLKEFRNFVDTHSNVVEACTLFAQVLVDQEDFDGAEEYFNRSIRVD 275
           +K I  G   R E++L  +   +    +  EA       LV+   +  A   F+++++V 
Sbjct: 533 NKGIALGKLGRDEEALAAYNKALKVKPDQHEAWKNKGNTLVNLGCYQEALAAFDQALKVK 592

Query: 276 PENASLYVHRAMLMLQARGNVDEAIKLIEKAISIDKSCMFAYETLGTIEVQRGRLEEAVK 335
           P+   ++ ++ ++++   G   EA+   ++A+ +  +    +   G + V  GR +EA+ 
Sbjct: 593 PDQHQVWKNKGIVLVNL-GCYQEALVAFDQALKVKPNDHEPWSNKGIVLVNLGRYQEALI 651

Query: 336 CFNKALPLARDEAELSHIYSLRDAAIAQMK-VCERYNIKKKVSPRSQNITKNEKLAIKQL 394
            F++ L +  D+ E+ +   +    + + +     ++   KV P    +  N+ +A+ +L
Sbjct: 652 AFDQTLKVKPDQYEVWNNKGIVLVNLGRYQEAITAFDQTLKVKPDQYEVWNNKGIALGKL 711

Query: 395 RENNDIIIRPADKGGKTVVMDKADYTQKMTSILNSNDYEIIPGDPTKTIEESEKYGNLEN 454
               + +               A + Q +   +  + YE+        +       NL  
Sbjct: 712 GRYQEAL---------------AAFDQTLK--VKPDQYEVWNNKGIALV-------NL-- 745

Query: 455 ESGQKHAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNP 514
                     + +A    D+  KV P+    +Y +   Y L G  E+A+ NL + I L+P
Sbjct: 746 --------GRYQEAITAFDQTLKVKPDDDKIFYNKACCYALQGNVEQAINNLQQAINLDP 797

Query: 515 NF 516
            +
Sbjct: 798 KY 799


>gi|428310718|ref|YP_007121695.1| hypothetical protein Mic7113_2488 [Microcoleus sp. PCC 7113]
 gi|428252330|gb|AFZ18289.1| tetratricopeptide repeat protein [Microcoleus sp. PCC 7113]
          Length = 548

 Score = 81.6 bits (200), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 108/453 (23%), Positives = 176/453 (38%), Gaps = 84/453 (18%)

Query: 61  ELDLLSKAKRAFEHEDYLTAIRHCTEEIESTSSNHTKALARLLRATVYIFTSQSTKAIED 120
           E D L++     ++E Y  AI   T+ IE    N   A A LLR    I       AI D
Sbjct: 144 EEDFLNQGIEKLQNEQYKEAIEDFTQAIEI---NSQYADAYLLRGCTRIEIDDYQGAIAD 200

Query: 121 LTQLVEDTSVDPKIKVNAHIKRAVVHLHAASDFTKAFADLDEAEKVDPNVADSYYQRGQI 180
            TQ ++    D  I    +  R   ++ A  D+  A AD  ++ K++P  A++YY RG I
Sbjct: 201 YTQTIQLLPDDSDI----YFMRGKGYI-ALDDYKSAIADFTQSIKINPQYAEAYYLRGCI 255

Query: 181 YCLFGQYEEALRNLDKTIALNPNFHVARAQRHFVVHKMIVPGDRERVEQSLKEFRNFVDT 240
           +   G ++EA+ +  +TI ++P++                                 VD 
Sbjct: 256 HSDIGNHQEAIADYTQTIQIDPSY---------------------------------VDA 282

Query: 241 HSNVVEACTLFAQVLVDQEDFDGAEEYFNRSIRVDPENASLYVHRAMLMLQARGNVDEAI 300
           + N          +L  QED+  A   ++ SIR+DP +A +Y  R    + A  N   AI
Sbjct: 283 YRNR-------GHLLAAQEDYKEAISDYSESIRLDPSDADIYFRRGKAYI-ALENYKSAI 334

Query: 301 KLIEKAISIDKSCMFAYETLGTIEVQRGRLEEAVKCFNKALPLARDEAELSHIYSLRDAA 360
               + I ID     AY   G +  +    + A+  F + +    + A+          A
Sbjct: 335 GDYTQVIKIDSKYSDAYFIRGCLCAELEDYQGAIADFTEVIKTNPNHADAYFQRGQARIA 394

Query: 361 IAQMK-VCERYNIKKKVSPRSQNITKNEKLAIKQLRENNDIIIRPADKGGKTVVMDKADY 419
           I   K   + +    K++P       N   A   +++ N  +               ADY
Sbjct: 395 IKDYKGAIQDFTEVIKINPNEVAPYLNRGDACTAIKDYNGAV---------------ADY 439

Query: 420 TQKMTSILNSNDYEIIPGDPTKTIEESEKYGNLENESGQKHAASDFTKAFADLDEAEKVD 479
           +Q +    N  D                K G   +E G +  A       AD D+A K+D
Sbjct: 440 SQVIQMEPNCADTYF-------------KRGCARSEKGDRQGA------IADYDQAIKLD 480

Query: 480 PNVADSYYQRGQIYCLFGQYEEALRNLDKTIAL 512
           P+ A +Y +R  +    G+ +EA+ +  K I+L
Sbjct: 481 PDYAYAYVKRAYVRKEKGKKQEAIADFQKAISL 513



 Score = 79.7 bits (195), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 76/325 (23%), Positives = 145/325 (44%), Gaps = 49/325 (15%)

Query: 67  KAKRAFEHEDYLTAIRHCTEEIESTSSNHTKALARLLRATVYIFTSQSTKAIEDLTQLVE 126
           + K     +DY +AI   T+ I+    N   A A  LR  ++       +AI D TQ ++
Sbjct: 218 RGKGYIALDDYKSAIADFTQSIKI---NPQYAEAYYLRGCIHSDIGNHQEAIADYTQTIQ 274

Query: 127 DTSVDPKIKVNAHIKRAVVHLHAAS-DFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFG 185
              +DP   V+A+  R   HL AA  D+ +A +D  E+ ++DP+ AD Y++RG+ Y    
Sbjct: 275 ---IDPSY-VDAYRNRG--HLLAAQEDYKEAISDYSESIRLDPSDADIYFRRGKAYIALE 328

Query: 186 QYEEALRNLDKTIALNPNFHVARAQRHFVVHKMIVPGDRERVEQSLKEFRNFVDTHSNVV 245
            Y+ A+ +  + I ++  +  A   R  +  ++      E  + ++ +F   + T+ N  
Sbjct: 329 NYKSAIGDYTQVIKIDSKYSDAYFIRGCLCAEL------EDYQGAIADFTEVIKTNPNHA 382

Query: 246 EACTLFAQVLVDQEDFDGAEEYFNRSIRVDPENASLYVHRA------------------M 287
           +A     Q  +  +D+ GA + F   I+++P   + Y++R                   +
Sbjct: 383 DAYFQRGQARIAIKDYKGAIQDFTEVIKINPNEVAPYLNRGDACTAIKDYNGAVADYSQV 442

Query: 288 LMLQA---------------RGNVDEAIKLIEKAISIDKSCMFAYETLGTIEVQRGRLEE 332
           + ++                +G+   AI   ++AI +D    +AY     +  ++G+ +E
Sbjct: 443 IQMEPNCADTYFKRGCARSEKGDRQGAIADYDQAIKLDPDYAYAYVKRAYVRKEKGKKQE 502

Query: 333 AVKCFNKALPLARDEAELSHIYSLR 357
           A+  F KA+ L   E+ L  I  L+
Sbjct: 503 AIADFQKAISLFYQESILEEIPDLQ 527



 Score = 61.6 bits (148), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 76/378 (20%), Positives = 155/378 (41%), Gaps = 48/378 (12%)

Query: 153 FTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQRH 212
           + +A  D  +A +++   AD+Y  RG        Y+ A+ +  +TI L P+     +  +
Sbjct: 160 YKEAIEDFTQAIEINSQYADAYLLRGCTRIEIDDYQGAIADYTQTIQLLPD----DSDIY 215

Query: 213 FVVHKMIVPGDRERVEQSLKEFRNFVDTHSNVVEACTLFAQVLVDQEDFDGAEEYFNRSI 272
           F+  K  +  D  +   ++ +F   +  +    EA  L   +  D  +   A   + ++I
Sbjct: 216 FMRGKGYIALDDYK--SAIADFTQSIKINPQYAEAYYLRGCIHSDIGNHQEAIADYTQTI 273

Query: 273 RVDPENASLYVHRAMLMLQARGNVDEAIKLIEKAISIDKSCMFAYETLGTIEVQRGRLEE 332
           ++DP     Y +R  L L A+ +  EAI    ++I +D S    Y   G   +     + 
Sbjct: 274 QIDPSYVDAYRNRGHL-LAAQEDYKEAISDYSESIRLDPSDADIYFRRGKAYIALENYKS 332

Query: 333 AVKCFNKALPLARDEAELSHIYSLRDAAIAQMKVCERYNIKKKVSPRSQNITKNEKLAIK 392
           A+  + + + +   +++ S  Y +R    A+++     + +  ++  ++ I  N   A  
Sbjct: 333 AIGDYTQVIKI---DSKYSDAYFIRGCLCAELE-----DYQGAIADFTEVIKTNPNHADA 384

Query: 393 QLRENNDIIIRPADKGGKTVVMDKADYTQKMTSILNSNDYEIIP----GDPTKTIEESEK 448
             +              +  + D     Q  T ++  N  E+ P    GD    I+    
Sbjct: 385 YFQRGQ----------ARIAIKDYKGAIQDFTEVIKINPNEVAPYLNRGDACTAIK---- 430

Query: 449 YGNLENESGQKHAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDK 508
                          D+  A AD  +  +++PN AD+Y++RG      G  + A+ + D+
Sbjct: 431 ---------------DYNGAVADYSQVIQMEPNCADTYFKRGCARSEKGDRQGAIADYDQ 475

Query: 509 TIALNPNFHVARAQRHFV 526
            I L+P++  A  +R +V
Sbjct: 476 AIKLDPDYAYAYVKRAYV 493



 Score = 61.2 bits (147), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 65/293 (22%), Positives = 133/293 (45%), Gaps = 38/293 (12%)

Query: 225 ERVEQSLKEFRNFVDTHSNVVEACTLFAQVLVDQEDFDGAEEYFNRSIRVDPENASLYVH 284
           E+ ++++++F   ++ +S   +A  L     ++ +D+ GA   + ++I++ P+++ +Y  
Sbjct: 158 EQYKEAIEDFTQAIEINSQYADAYLLRGCTRIEIDDYQGAIADYTQTIQLLPDDSDIYFM 217

Query: 285 RAMLMLQARGNVDEAIKLIEKAISIDKSCMFAYETLGTIEVQRGRLEEAVKCFNKALPLA 344
           R    + A  +   AI    ++I I+     AY   G I    G  +EA+  + + + + 
Sbjct: 218 RGKGYI-ALDDYKSAIADFTQSIKINPQYAEAYYLRGCIHSDIGNHQEAIADYTQTIQI- 275

Query: 345 RDEAELSHIYSLRDAAIAQMKVCERYNIKKKVSPRSQNITKNEKLAIKQLRENNDIIIRP 404
               + S++ + R+       +  + + K+ +S  S++I                  + P
Sbjct: 276 ----DPSYVDAYRNRG---HLLAAQEDYKEAISDYSESIR-----------------LDP 311

Query: 405 ADKGGKTVVMDKAD-YTQKMTSILNSNDYEIIPGDPTKTIEESEKYGNLENESGQKHAA- 462
           +D          AD Y ++  + +   +Y+   GD T+ I+   KY +     G   A  
Sbjct: 312 SD----------ADIYFRRGKAYIALENYKSAIGDYTQVIKIDSKYSDAYFIRGCLCAEL 361

Query: 463 SDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPN 515
            D+  A AD  E  K +PN AD+Y+QRGQ       Y+ A+++  + I +NPN
Sbjct: 362 EDYQGAIADFTEVIKTNPNHADAYFQRGQARIAIKDYKGAIQDFTEVIKINPN 414


>gi|427710488|ref|YP_007052865.1| hypothetical protein Nos7107_5206 [Nostoc sp. PCC 7107]
 gi|427362993|gb|AFY45715.1| Tetratricopeptide TPR_1 repeat-containing protein [Nostoc sp. PCC
           7107]
          Length = 609

 Score = 81.6 bits (200), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 87/400 (21%), Positives = 165/400 (41%), Gaps = 58/400 (14%)

Query: 147 LHAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNP---- 202
           L++ +D+ +A A+ + A  ++P +A+S++ RG +YC  G+Y+ A+ +  + I +NP    
Sbjct: 82  LYSLADYEEAIANYEWALAINPKLAESHHGRGNVYCALGEYDRAIADYHQAIEINPELVT 141

Query: 203 --NFHVARAQRHFVVHKM---IVPGDRERVEQSLKEFRNFVDTHS---NVVEACTLFAQV 254
             +F +ARA  +  V +       G     +Q+L+ +  +   +S   N+      + Q 
Sbjct: 142 HIDFDIARAFHYRGVARSENGDYQGALADFQQALQWYPQYAAVYSSRGNIFHILEEYEQA 201

Query: 255 LVDQEDFDGAEEYFNRSIRVDPENASLYVHRAMLMLQARGNVDEAIKLIEKAISIDKSCM 314
           + D E          R++++DP     Y +R      A G+   AI    +A+ I+    
Sbjct: 202 IADHE----------RALQLDPHLVEAYHYRGNTCY-ALGDYPGAIADYNRALQINPHFA 250

Query: 315 FAYETLGTIEVQRGRLEEAVKCFNKALPLARDEAELSHIYSLRDAAIAQMKVCERYNIKK 374
            AY   G +         A+  FN+AL L  D+ +  +   L  A +         +   
Sbjct: 251 QAYYNRGLVRSYLKDYPAAIADFNQALQLNPDDVQAYYERGLVRATLG--------DFPG 302

Query: 375 KVSPRSQNITKNEKLAI----------------KQLRENNDII-IRPADKGGKTVVMDKA 417
            ++   Q + KN  LA+                  + ++N I+ I P    G        
Sbjct: 303 AITDYEQALAKNPTLALVYGFLAHARCQLGDYQGTIADSNHILQIHPEYAEG-------- 354

Query: 418 DYTQKMTSILNSNDYEIIPGDPTKTIEESEKYGNLENESG-QKHAASDFTKAFADLDEAE 476
            Y  + T+     DY+    D  + ++            G  + A  D+  A  +  +A 
Sbjct: 355 -YCDRATARRCLGDYQGAILDYNRALQLHPNLATAYYGRGLAREALQDYLAAVEEYAQAI 413

Query: 477 KVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNF 516
           K+DP+ + +Y  RG    L G  + AL + ++ I +NP+ 
Sbjct: 414 KIDPDFSPAYCNRGNALRLLGAEQRALADYNQAIKINPSL 453



 Score = 75.1 bits (183), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 97/454 (21%), Positives = 177/454 (38%), Gaps = 85/454 (18%)

Query: 81  IRHCTEEIESTSSNHTKAL---ARLLRATVYIFTSQSTKAIEDLTQLVEDTS----VDPK 133
           I H  EE E   ++H +AL     L+ A  Y +   +  A+ D    + D +    ++P 
Sbjct: 191 IFHILEEYEQAIADHERALQLDPHLVEA--YHYRGNTCYALGDYPGAIADYNRALQINPH 248

Query: 134 IKVNAHIKRAVVHLHAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRN 193
               A+  R +V  +   D+  A AD ++A +++P+   +YY+RG +    G +  A+ +
Sbjct: 249 F-AQAYYNRGLVRSYL-KDYPAAIADFNQALQLNPDDVQAYYERGLVRATLGDFPGAITD 306

Query: 194 LDKTIALNPNFHVARAQRHFVVHKMIVPGDRERVEQSLKEFRNFVDTHSNVVEACTLFAQ 253
            ++ +A NP   +      F+ H     GD    + ++ +  + +  H    E     A 
Sbjct: 307 YEQALAKNPTLALVYG---FLAHARCQLGD---YQGTIADSNHILQIHPEYAEGYCDRAT 360

Query: 254 VLVDQEDFDGAEEYFNRSIRVDPENASLYVHRAMLMLQARGNVDEAIKLIEKAISIDKSC 313
                 D+ GA   +NR++++ P  A+ Y  R  L  +A  +   A++   +AI ID   
Sbjct: 361 ARRCLGDYQGAILDYNRALQLHPNLATAYYGRG-LAREALQDYLAAVEEYAQAIKIDPDF 419

Query: 314 MFAYETLGTIEVQRGRLEEAVKCFNKALPLARDEAELSHIYSLRDAAIAQMKVCERYNIK 373
             AY   G           A++                          A+ +    YN  
Sbjct: 420 SPAYCNRGN----------ALRLLG-----------------------AEQRALADYNQA 446

Query: 374 KKVSPRSQNITKNEKLAIKQLRENNDIIIRPADKGGKTVVMDKADYTQKMTSILNSNDYE 433
            K++P       N       L++ +  I               ADYT  +         +
Sbjct: 447 IKINPSLVEAYYNRGSLHYALQDYHGAI---------------ADYTTAL---------Q 482

Query: 434 IIPGDPTKTIEESEKYGNLENESGQKHAASDFTKAFADLDEAEKVDPNVADSYYQRGQIY 493
           I P       + +  Y          +A  D+ KA AD ++A  +DP+ A+ +Y RG+  
Sbjct: 483 INPNSAAFYSDRASAY----------YALQDYQKAIADYNQAIVLDPSFAEDWYHRGRSR 532

Query: 494 CLFGQYEEALRNLDKTIALNPNFHVARAQRHFVW 527
            L G  + AL +L++ +   P++  A   R  V+
Sbjct: 533 LLLGDLQGALADLNQALQRQPHWASAYMLRADVY 566



 Score = 62.8 bits (151), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 98/446 (21%), Positives = 160/446 (35%), Gaps = 61/446 (13%)

Query: 151 SDFTKAFADLDEAEKVDPNVADSYYQRGQI-YCLFGQYEEALRNLDKTIALNPNFHVARA 209
            DF  A AD  EA ++ PN A++YY RG I Y     Y  A+ +  K I L PNF  A  
Sbjct: 17  GDFQGAIADYTEAIQLKPNFAEAYYNRGNIFYSSLRDYRAAIADFHKAIQLKPNFAEAYH 76

Query: 210 QRHFVVHKM---------------IVPG------DRERVEQSLKEF-RNFVDTHSNVVEA 247
            R   ++ +               I P        R  V  +L E+ R   D H  +   
Sbjct: 77  NRGNTLYSLADYEEAIANYEWALAINPKLAESHHGRGNVYCALGEYDRAIADYHQAIEIN 136

Query: 248 CTLFAQVLVD--------------QEDFDGAEEYFNRSIRVDPENASLYVHRAMLMLQAR 293
             L   +  D                D+ GA   F ++++  P+ A++Y         +R
Sbjct: 137 PELVTHIDFDIARAFHYRGVARSENGDYQGALADFQQALQWYPQYAAVY--------SSR 188

Query: 294 GNV-------DEAIKLIEKAISIDKSCMFAYETLGTIEVQRGRLEEAVKCFNKALPLARD 346
           GN+       ++AI   E+A+ +D   + AY   G      G    A+  +N+AL +   
Sbjct: 189 GNIFHILEEYEQAIADHERALQLDPHLVEAYHYRGNTCYALGDYPGAIADYNRALQI--- 245

Query: 347 EAELSHIYSLRDAAIAQMK----VCERYNIKKKVSPRSQNITKNEKLAIKQLRENNDIII 402
               +  Y  R    + +K        +N   +++P          L    L +    I 
Sbjct: 246 NPHFAQAYYNRGLVRSYLKDYPAAIADFNQALQLNPDDVQAYYERGLVRATLGDFPGAIT 305

Query: 403 RPADKGGKTVVMDKADYTQKMTSILNSNDYEIIPGDPTKTIEESEKYG-NLENESGQKHA 461
                  K   +    Y     +     DY+    D    ++   +Y     + +  +  
Sbjct: 306 DYEQALAKNPTLALV-YGFLAHARCQLGDYQGTIADSNHILQIHPEYAEGYCDRATARRC 364

Query: 462 ASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARA 521
             D+  A  D + A ++ PN+A +YY RG        Y  A+    + I ++P+F  A  
Sbjct: 365 LGDYQGAILDYNRALQLHPNLATAYYGRGLAREALQDYLAAVEEYAQAIKIDPDFSPAYC 424

Query: 522 QRHFVWTSTLAELMAFSDEFMIPKIT 547
            R        AE  A +D     KI 
Sbjct: 425 NRGNALRLLGAEQRALADYNQAIKIN 450



 Score = 47.4 bits (111), Expect = 0.018,   Method: Compositional matrix adjust.
 Identities = 45/218 (20%), Positives = 95/218 (43%), Gaps = 19/218 (8%)

Query: 82  RHCTEEIESTSSNHTKALARLLR-ATVYIFTSQSTKAIEDLTQLVEDTS----VDPKIKV 136
           R C  + +    ++ +AL      AT Y     + +A++D    VE+ +    +DP    
Sbjct: 362 RRCLGDYQGAILDYNRALQLHPNLATAYYGRGLAREALQDYLAAVEEYAQAIKIDPDFSP 421

Query: 137 NAHIKRAVVHLHAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDK 196
               +   + L  A    +A AD ++A K++P++ ++YY RG ++     Y  A+ +   
Sbjct: 422 AYCNRGNALRLLGAE--QRALADYNQAIKINPSLVEAYYNRGSLHYALQDYHGAIADYTT 479

Query: 197 TIALNPN---FHVARAQRHFVVHKMIVPGDRERVEQSLKEFRNFVDTHSNVVEACTLFAQ 253
            + +NPN   F+  RA  ++ +         +  ++++ ++   +    +  E      +
Sbjct: 480 ALQINPNSAAFYSDRASAYYAL---------QDYQKAIADYNQAIVLDPSFAEDWYHRGR 530

Query: 254 VLVDQEDFDGAEEYFNRSIRVDPENASLYVHRAMLMLQ 291
             +   D  GA    N++++  P  AS Y+ RA +  Q
Sbjct: 531 SRLLLGDLQGALADLNQALQRQPHWASAYMLRADVYRQ 568



 Score = 47.4 bits (111), Expect = 0.018,   Method: Compositional matrix adjust.
 Identities = 26/64 (40%), Positives = 34/64 (53%), Gaps = 1/64 (1%)

Query: 454 NESGQKHAASDFTKAFADLDEAEKVDPNVADSYYQRGQI-YCLFGQYEEALRNLDKTIAL 512
           N+   K+   DF  A AD  EA ++ PN A++YY RG I Y     Y  A+ +  K I L
Sbjct: 8   NQGFNKNLQGDFQGAIADYTEAIQLKPNFAEAYYNRGNIFYSSLRDYRAAIADFHKAIQL 67

Query: 513 NPNF 516
            PNF
Sbjct: 68  KPNF 71



 Score = 44.3 bits (103), Expect = 0.19,   Method: Compositional matrix adjust.
 Identities = 29/105 (27%), Positives = 55/105 (52%), Gaps = 4/105 (3%)

Query: 117 AIEDLTQLVEDTSVDPKIKVNA---HIKRAVVHLHAASDFTKAFADLDEAEKVDPNVADS 173
           A++D    + D +   +I  N+   +  RA  + +A  D+ KA AD ++A  +DP+ A+ 
Sbjct: 466 ALQDYHGAIADYTTALQINPNSAAFYSDRASAY-YALQDYQKAIADYNQAIVLDPSFAED 524

Query: 174 YYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQRHFVVHKM 218
           +Y RG+   L G  + AL +L++ +   P++  A   R  V  ++
Sbjct: 525 WYHRGRSRLLLGDLQGALADLNQALQRQPHWASAYMLRADVYRQL 569


>gi|150864303|ref|XP_001383061.2| mitochondrial outer membrane specialized import receptor
           [Scheffersomyces stipitis CBS 6054]
 gi|149385559|gb|ABN65032.2| mitochondrial outer membrane specialized import receptor
           [Scheffersomyces stipitis CBS 6054]
          Length = 585

 Score = 81.3 bits (199), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 89/367 (24%), Positives = 166/367 (45%), Gaps = 26/367 (7%)

Query: 22  PSKQFIKTYLKSFPNDPILQPDGLSNGVELTNGDTNESHEL-DLLSKAKRAFEHEDYLT- 79
           PS   I ++  +F  +   +P+G+S   E T  D      L ++ S   +A+E  D L  
Sbjct: 224 PSAATIGSFFGAFLKE--TEPEGISE--ESTGADAFLYQALKNINSNTPQAYEDADTLIN 279

Query: 80  -AIR-HCTEEIESTSSNHTKALARLLRATVYIFTSQSTKAIEDLTQLVEDTSVDPKIKVN 137
            A+  +  EE+   S    KA   L     + F      +    + L +  ++ P+ +  
Sbjct: 280 QAVEAYNVEELSKDSEEAAKASIALEYLAAFQFLKNDPASA--ASHLEKAIALKPRPR-- 335

Query: 138 AHIKRAVVHLHAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKT 197
           ++I RA+++   +S +T++ +D  +AE++DPN  D +Y  GQ++ L G   +A  N +K 
Sbjct: 336 SYIFRALINADKSS-YTESLSDFAKAEEMDPNCPDIFYHLGQLFYLTGDLSKAQANFEKA 394

Query: 198 IALNPNFHVARAQRHFVVHKMIVPGDRERVEQSLKEFRNFVDTHSNVVEACTLFAQVLVD 257
             LNP+   A  Q   + +K         +E + ++F       +   E    + ++L D
Sbjct: 395 KELNPDNVFAYIQLACITYK------NGSIEAANEKFTEAKLKFATSPEVPNYYGEILAD 448

Query: 258 QEDFDGAEEYFNRSIRVDPENASLYVHRAMLMLQAR-------GNVDEAIKLIEKAISID 310
           + D  GA + F+ + R+     +  V    L+ +A          +DEA +L+ KA  +D
Sbjct: 449 KGDIQGACKQFDIAARLQESLPNFSVGALPLINKASIISRESFERIDEAGELLNKACELD 508

Query: 311 KSCMFAYETLGTIEVQRGRLEEAVKCFNKALPLARDEAELSHIYSLRDAAIAQMKVCERY 370
                A  TL  I++Q+  +E+A+  F ++  LAR   E     S  +A   Q ++ +  
Sbjct: 509 PKSELARITLAQIKLQKDEVEDAIVLFEESSDLARSYEEKVQATSFAEATKVQKRIKQDP 568

Query: 371 NIKKKVS 377
            +  K+S
Sbjct: 569 ILTAKIS 575



 Score = 46.2 bits (108), Expect = 0.040,   Method: Compositional matrix adjust.
 Identities = 20/53 (37%), Positives = 33/53 (62%)

Query: 463 SDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPN 515
           S +T++ +D  +AE++DPN  D +Y  GQ++ L G   +A  N +K   LNP+
Sbjct: 348 SSYTESLSDFAKAEEMDPNCPDIFYHLGQLFYLTGDLSKAQANFEKAKELNPD 400


>gi|146184699|ref|XP_001029949.2| SLEI family protein [Tetrahymena thermophila]
 gi|146143045|gb|EAR82286.2| SLEI family protein [Tetrahymena thermophila SB210]
          Length = 2342

 Score = 81.3 bits (199), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 86/370 (23%), Positives = 159/370 (42%), Gaps = 22/370 (5%)

Query: 166 VDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQRHFVVHKMIVPGDRE 225
           +D N A++YY  G  + L    +++L + +K +++NPN+  A A +  +  K      + 
Sbjct: 38  IDSNNAEAYYSLGCCFELKNLVDDSLESFNKVLSINPNYLKAYASKADIHLK------KS 91

Query: 226 RVEQSLKEFRNFVDTHSNVVEACTLFAQVLVDQEDFDGAEEYFNRSIRVDPENASLYVHR 285
            +++++   +  ++   N V+A    AQ    Q   D   E + + I ++P+N   + H 
Sbjct: 92  NIDEAIISLKQAIEIDPNFVQAYQKLAQAYKKQNKLDQITECYKKIIEIEPKNMEAF-HE 150

Query: 286 AMLMLQARGNVDEAIKLIEKAISIDKSCMFAYETLGTIEVQRGRLEEAVKCFNKALPLAR 345
             L  + +G +DEA    +K ++ID   + AY +L          EEA++    AL +  
Sbjct: 151 LALTYEIKGQIDEAYAWYKKILTIDPQFIKAYISLARNYFCDSMTEEAIRMLKTALEIDP 210

Query: 346 DEAE----LSHIY---SLRDAAIAQMKVCERYNIKKKVSPRSQNITKNEKLAIKQLRENN 398
           + AE    L  IY   S+ D+A+   K+     ++K  +  S  I+      +KQL +  
Sbjct: 211 NSAEAHERLGFIYEKQSMFDSALISYKIA----LEKNPNFLSVYISLAYIYFLKQLDQEA 266

Query: 399 DIIIRPADKGGKTVVMDKADYTQKMTSILNSNDYEIIPGDPTKTIEESEKYGNLENESG- 457
              +R A +     V     Y +      N   YE    +  K IE   KY N +   G 
Sbjct: 267 IKQLRKAIEIDPNFVQ---AYERLGFVFQNRKKYEEAIKNYKKAIELDPKYFNAQYNLGL 323

Query: 458 QKHAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFH 517
             +    +  +     +A ++DP   D+Y   G +Y       EA++   K + LNP+++
Sbjct: 324 LYYYQGKYNDSLLCYKKAIELDPKYVDAYNNLGLVYFGLDMNNEAIQYYQKALELNPDYY 383

Query: 518 VARAQRHFVW 527
            A       +
Sbjct: 384 KAHYNSGLAY 393



 Score = 75.5 bits (184), Expect = 8e-11,   Method: Compositional matrix adjust.
 Identities = 78/364 (21%), Positives = 164/364 (45%), Gaps = 31/364 (8%)

Query: 167  DPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQRHFVVHKMIVPGDRER 226
            +P  A SY++ GQ Y      ++A+  L K I ++P +  A  +  F+        +++ 
Sbjct: 888  NPESAKSYFELGQFYQSQQNNKKAIDCLKKVIEIDPKYFEAYEKLAFIFK------EKKM 941

Query: 227  VEQSLKEFRNFVDTHSNVVEACTLFAQVLVDQEDFDGAEEYFNRSIRVDPENASLYVHRA 286
             + S++ ++   + +    +A     ++ +D++    A+E+ N+ +  +P NA ++    
Sbjct: 942  FDLSIENYQKAFELNPKFTDAIKKIMRIYLDRKMVSEAKEFHNKMLEENPNNAEIFYQLG 1001

Query: 287  MLMLQARGNVDEAIKLIEKAISIDKSCMFAYETLGTIEVQRGRLEEAVKCFNKALPLARD 346
                +     ++AI   +K I ID   + ++  LG I + +   ++A++ FNK + L   
Sbjct: 1002 EAYQEDSSKYEDAIACYKKVIQIDPKHIDSHIELGCIYLDKKEYQQAIEYFNKVIELDPK 1061

Query: 347  EAELSHIYSLRDAAIAQM------KVCERYNIKKKVSPRSQNITKNEKLAI-------KQ 393
            E     + +L +  +A        K  E YN   +++P  Q    N  L         K 
Sbjct: 1062 E-----VVALNNIGLAYYDQKMNEKALEYYNKALEINPTFQQSIYNTGLVYEIQNQYEKA 1116

Query: 394  LRENNDII-IRPADKGGKTVVMDKADYTQKMTSILNSNDYEIIPGDPTKTIEESEKYGNL 452
            L   N ++ I P +K     ++      +K+ +I +    E    +   T+  +++Y + 
Sbjct: 1117 LEYYNKVLKINPTEKKS---LLRVEKINEKIGNINSEKPEETSKKEVQNTLSSAKEYYS- 1172

Query: 453  ENESGQKHAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIAL 512
              +    +A  +  K+   L +A ++DPN  ++Y + G IY   G ++EA++N  K + +
Sbjct: 1173 --KGYDFYAQMEDEKSIQCLQKAIEIDPNYYEAYDKLGLIYGEKGMFDEAIQNYLKALEI 1230

Query: 513  NPNF 516
            NP F
Sbjct: 1231 NPKF 1234



 Score = 74.3 bits (181), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 83/397 (20%), Positives = 184/397 (46%), Gaps = 41/397 (10%)

Query: 135  KVNAHIKRAVVHLHAASDFTKAF-ADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRN 193
            ++N + K++++ +   +   + F + + ++ + +P  A  YY++G +Y +  Q ++++  
Sbjct: 1399 QINPNEKKSLLRIQKINSLNENFDSKIQQSIENNPQTAKDYYKQGFLYYVQMQDDKSIEC 1458

Query: 194  LDKTIALNPNFHVARAQRHFVVHKMIVPGDRERVEQSLKEFRNFVDTHSNVVEACTLFAQ 253
            L K++ L+P +  A  +  FV  +      ++  E++L+ F+  +  +     + +   +
Sbjct: 1459 LKKSVELDPLYFEAYDKLGFVYQQ------KKMYEEALEYFKEAIKINPKCFNSISSIMR 1512

Query: 254  VLVDQEDFDGAEEYFNRSIRVDPENASLYVHRAMLMLQARGNVDEAIKLIEKAISIDKSC 313
            + ++Q+  D A+EY      ++P+ A         + Q +  VDEAI   +KAI ++   
Sbjct: 1513 IYLEQKKIDEAKEYHKMINEMNPDCAQT-QQELGTVYQDQKMVDEAIACYQKAIELNPQS 1571

Query: 314  MFAYETLGTIEVQRGRLEEAVKCFNKALPL------ARDEAELSHI-YSLRDAAIAQMKV 366
              AY  LG   + +   ++A++C+ K L +      A +   L H   ++ D A+     
Sbjct: 1572 TSAYIELGNSYLGKVMYDKALECYKKVLEIDPKKAVAYNNIGLVHYNQNMDDLAL----- 1626

Query: 367  CERYNIKKKVSPRSQNITKNEKLAIKQLRENND--------IIIRPADKGGKTVV--MDK 416
             E YN   +V+P+ +    N  L  +Q  +N+         + I P DK   T +  +++
Sbjct: 1627 -EYYNKALEVNPKYELSIYNSGLIYEQKNQNDKALECYKKVLAINPTDKKTLTRIEKINE 1685

Query: 417  ADYTQKMTSILNSNDYEIIPGDPTKTIEESEKYGNLENESGQKHAASDFTKAFADLDEAE 476
             +   K++        + +P      +E++  Y  ++             ++   L +A 
Sbjct: 1686 KNVNLKLSEKDLEEKLQKVPVTAKDHLEQAFLYLTIKK----------VEQSIELLKKAI 1735

Query: 477  KVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALN 513
            ++DPN  D+Y + G IY     +E+A++N +K I +N
Sbjct: 1736 EIDPNYYDAYDKLGLIYKQKEMFEDAIQNYEKAIEIN 1772



 Score = 72.8 bits (177), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 51/198 (25%), Positives = 100/198 (50%), Gaps = 9/198 (4%)

Query: 147  LHAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHV 206
             +A  +  K+   L +A ++DPN  ++Y + G IY   G ++EA++N  K + +NP F  
Sbjct: 1177 FYAQMEDEKSIQCLQKAIEIDPNYYEAYDKLGLIYGEKGMFDEAIQNYLKALEINPKFF- 1235

Query: 207  ARAQRHFVVHKMIVPGDRERVEQSLKEF-RNFVDTHSNVVEACTLFAQVLVDQEDFDGAE 265
                   +   M +  D+ R+E++ KEF +  VD + N  E      +V  DQ   D A 
Sbjct: 1236 -----DIIPSIMNIYFDQNRIEEA-KEFHQKIVDLNPNCTETLYELGEVYQDQNMIDEAF 1289

Query: 266  EYFNRSIRVDPENASLYVHRAMLMLQARGNVDEAIKLIEKAISIDKSCMFAYETLGTIEV 325
            E + + +++DP+    ++    + L    N D+A++  ++A+ I+   + AY  +G +  
Sbjct: 1290 ECYQKILKIDPQYIDAHIELGNIYLDKHDN-DQALECYKRALEINPKEIVAYNNIGLVYY 1348

Query: 326  QRGRLEEAVKCFNKALPL 343
                 ++A++ + KAL +
Sbjct: 1349 NLKNSDQALEYYKKALEI 1366



 Score = 68.6 bits (166), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 106/480 (22%), Positives = 207/480 (43%), Gaps = 49/480 (10%)

Query: 67  KAKRAFEHEDYLTAIRHCTEEIESTSSNHTKALARLLRATVYIFTSQSTKAIEDLTQLVE 126
           K  +A++ ++ L  I  C ++I      + +A   L  A  Y    Q  +A     +++ 
Sbjct: 116 KLAQAYKKQNKLDQITECYKKIIEIEPKNMEAFHEL--ALTYEIKGQIDEAYAWYKKIL- 172

Query: 127 DTSVDPKIKVNAHIKRAVVHLHAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQ 186
             ++DP+  + A+I  A  +    S   +A   L  A ++DPN A+++ + G IY     
Sbjct: 173 --TIDPQF-IKAYISLARNYF-CDSMTEEAIRMLKTALEIDPNSAEAHERLGFIYEKQSM 228

Query: 187 YEEALRNLDKTIALNPNF---HVARAQRHFVVHKMIVPGDRERVEQSLKEFRNFVDTHSN 243
           ++ AL +    +  NPNF   +++ A  +F+         ++  ++++K+ R  ++   N
Sbjct: 229 FDSALISYKIALEKNPNFLSVYISLAYIYFL---------KQLDQEAIKQLRKAIEIDPN 279

Query: 244 VVEACTLFAQVLVDQEDFDGAEEYFNRSIRVDPE--NASLYVHRAMLMLQARGNVDEAIK 301
            V+A      V  +++ ++ A + + ++I +DP+  NA    +   L+   +G  ++++ 
Sbjct: 280 FVQAYERLGFVFQNRKKYEEAIKNYKKAIELDPKYFNAQ---YNLGLLYYYQGKYNDSLL 336

Query: 302 LIEKAISIDKSCMFAYETLGTIEVQRGRLEEAVKCFNKALPLARDEAELSHIYSL---RD 358
             +KAI +D   + AY  LG +        EA++ + KAL L  D  +  +   L   +D
Sbjct: 337 CYKKAIELDPKYVDAYNNLGLVYFGLDMNNEAIQYYQKALELNPDYYKAHYNSGLAYEKD 396

Query: 359 AAIAQMKVCERYNIKKKVSPRSQNITKNEKLAIKQLRENNDIIIR--PADKG---GKTVV 413
             I +    E Y    K++P+           +K L    DI +     D+G    K +V
Sbjct: 397 NLIEE--AIESYKKAIKINPK----------FLKALIRLGDICVEREMIDEGIECFKKIV 444

Query: 414 M----DKADYTQKMTSILNSNDYEIIPGDPTKTIEESEKYGNLENESGQKHAASD-FTKA 468
                 + D+       L    YE       KT+E + +Y    N  G  +     F +A
Sbjct: 445 QLSPNSEYDFFSLGELYLTKKIYEEAIKCYKKTLEINPQYIKALNNLGLAYEYQQMFDQA 504

Query: 469 FADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQRHFVWT 528
                +A ++DPN   +YY  G  Y      +EA+    K + +NP +  A     ++++
Sbjct: 505 IECYKKAIEIDPNYHLAYYNCGISYASKKMVDEAIECYKKVLEINPQYLNASTNMGYLYS 564



 Score = 66.6 bits (161), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 105/456 (23%), Positives = 188/456 (41%), Gaps = 71/456 (15%)

Query: 90  STSSNHTKALARLLRATVYIFTSQSTKAIEDLTQLVEDTSVDPK-IKVNAHIKRAVVHLH 148
           S + N+ KA A   +A +++  S   +AI  L Q +E   +DP  ++    + +A    +
Sbjct: 71  SINPNYLKAYAS--KADIHLKKSNIDEAIISLKQAIE---IDPNFVQAYQKLAQAYKKQN 125

Query: 149 AASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNF---H 205
                T+ +  + E   ++P   +++++    Y + GQ +EA     K + ++P F   +
Sbjct: 126 KLDQITECYKKIIE---IEPKNMEAFHELALTYEIKGQIDEAYAWYKKILTIDPQFIKAY 182

Query: 206 VARAQRHFVVHKMIVPGDRERVEQSLKEFRNFVDTHSNVVEACTLFAQVLVDQEDFDGAE 265
           ++ A+ +F              E++++  +  ++   N  EA      +   Q  FD A 
Sbjct: 183 ISLARNYFC---------DSMTEEAIRMLKTALEIDPNSAEAHERLGFIYEKQSMFDSAL 233

Query: 266 EYFNRSIRVDPENASLYVHRAMLMLQARGNVDEAIKLIEKAISIDKSCMFAYETLGTIEV 325
             +  ++  +P   S+Y+  A +    + +  EAIK + KAI ID + + AYE LG +  
Sbjct: 234 ISYKIALEKNPNFLSVYISLAYIYFLKQLD-QEAIKQLRKAIEIDPNFVQAYERLGFVFQ 292

Query: 326 QRGRLEEAVKCFNKALPLARDEAELSHIYSLRDAAIAQMKVCERYNIKKK---VSPRSQN 382
            R + EEA+K + KA+ L  D    +  Y+L      Q K  +     KK   + P+  +
Sbjct: 293 NRKKYEEAIKNYKKAIEL--DPKYFNAQYNLGLLYYYQGKYNDSLLCYKKAIELDPKYVD 350

Query: 383 ITKNEKLAIKQLRENNDIIIRPADKGGKTVVMDKADYTQKMTSILNSNDYEI-----IPG 437
              N  L    L  NN+ I                 Y QK    LN + Y+      +  
Sbjct: 351 AYNNLGLVYFGLDMNNEAI----------------QYYQKALE-LNPDYYKAHYNSGLAY 393

Query: 438 DPTKTIEESEKYGNLENESGQKHAASDFTKAFADLD----EAEKVD-------------P 480
           +    IEE+     +E+          F KA   L     E E +D             P
Sbjct: 394 EKDNLIEEA-----IESYKKAIKINPKFLKALIRLGDICVEREMIDEGIECFKKIVQLSP 448

Query: 481 NVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNF 516
           N    ++  G++Y     YEEA++   KT+ +NP +
Sbjct: 449 NSEYDFFSLGELYLTKKIYEEAIKCYKKTLEINPQY 484



 Score = 56.2 bits (134), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 62/271 (22%), Positives = 123/271 (45%), Gaps = 19/271 (7%)

Query: 93   SNHTKALARLLRATVYIFTSQSTKAIEDLTQLVEDTSVDPKIKVNAHIKRAVVHLHAASD 152
            S H  A  +L    VY+      KA+E   +++E   +D K +V A+    +V+ +   D
Sbjct: 1841 SKHVNAYVKL--GNVYLKLIMYDKALEVFQKILE---IDTK-QVVAYNNIGLVYYNQKKD 1894

Query: 153  FTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQRH 212
               A     +A +++P    S Y  G +Y    Q ++AL    K + +NPN      +  
Sbjct: 1895 -DLALEYYQKALEINPKYLLSLYNSGLVYETKNQNDKALECYQKALDINPNDKQTLDRMM 1953

Query: 213  FVVHKMIVPGDRERVEQSLKEF-RNFVDTHSNVVEACTLFAQVLVDQEDFDGAEEYFNRS 271
             +  K  +  D   V+  L++  +N    +    +  T +++ + DQ     + +  N++
Sbjct: 1954 KLFLKTGIIKDEFDVDNFLQKMEKNTQSAYDFYKQGYTFYSKKMKDQ-----SIKCLNKA 2008

Query: 272  IRVDPENASLYVHRAMLMLQARGNVDEAIKLIEKAISIDKSCMFAYETLGTIEVQRGRLE 331
            I +DP     Y  +  L+ + +G +D+AI+  +K I I+   + AY  LG I + + +L 
Sbjct: 2009 IEIDPNFFEAY-DKLGLIYEEKGMLDQAIENYKKVIEINPKFINAYNKLGNIYLDKKQLN 2067

Query: 332  EAVKCFNKALPLARDEAELSHIYSLRDAAIA 362
            E++  + K       E + +++Y   +  +A
Sbjct: 2068 ESISYYQKC-----TEIDPNYLYGFYNLGLA 2093



 Score = 56.2 bits (134), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 101/476 (21%), Positives = 198/476 (41%), Gaps = 88/476 (18%)

Query: 96   TKALARLLRATVYIFTSQSTKAIEDLTQLVEDTSVDPKIKVNAHIKRAVVHLHAASDFTK 155
            T A+ +++R  +Y+     ++A E   +++E+   + +I      +    +   +S +  
Sbjct: 960  TDAIKKIMR--IYLDRKMVSEAKEFHNKMLEENPNNAEI----FYQLGEAYQEDSSKYED 1013

Query: 156  AFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQRHFVV 215
            A A   +  ++DP   DS+ + G IY    +Y++A+   +K I L+P   VA        
Sbjct: 1014 AIACYKKVIQIDPKHIDSHIELGCIYLDKKEYQQAIEYFNKVIELDPKEVVALNNIGLAY 1073

Query: 216  HKMIVPGDRERVEQSLKEFRNFVDTHSNVVEACTLFAQVLVDQEDFDGAEEYFNRSIRVD 275
            +      D++  E++L+ +   ++ +    ++      V   Q  ++ A EY+N+ ++++
Sbjct: 1074 Y------DQKMNEKALEYYNKALEINPTFQQSIYNTGLVYEIQNQYEKALEYYNKVLKIN 1127

Query: 276  P-ENASLYVHRAMLMLQARGNVD------------------------------------E 298
            P E  SL   R   + +  GN++                                    +
Sbjct: 1128 PTEKKSLL--RVEKINEKIGNINSEKPEETSKKEVQNTLSSAKEYYSKGYDFYAQMEDEK 1185

Query: 299  AIKLIEKAISIDKSCMFAYETLGTIEVQRGRLEEAVKCFNKALPLARDEAELSHIYSLRD 358
            +I+ ++KAI ID +   AY+ LG I  ++G  +EA++ + KAL +     ++  I S+ +
Sbjct: 1186 SIQCLQKAIEIDPNYYEAYDKLGLIYGEKGMFDEAIQNYLKALEINPKFFDI--IPSIMN 1243

Query: 359  AAIAQMKVCERYNIKKKVSPRSQNITKNEKLAIKQLRENNDII------------IRP-- 404
                Q ++ E     +K+   + N T+     + ++ ++ ++I            I P  
Sbjct: 1244 IYFDQNRIEEAKEFHQKIVDLNPNCTET-LYELGEVYQDQNMIDEAFECYQKILKIDPQY 1302

Query: 405  --ADKGGKTVVMDKADYTQKMTSI---LNSNDYEIIPGDPTKTIEESEKYGNLENESGQK 459
              A      + +DK D  Q +      L  N  EI+  +    +     Y NL+N     
Sbjct: 1303 IDAHIELGNIYLDKHDNDQALECYKRALEINPKEIVAYNNIGLV-----YYNLKNSD--- 1354

Query: 460  HAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPN 515
             A   + KA        ++DPN   S Y  G  Y    Q EEAL+  +K   +NPN
Sbjct: 1355 QALEYYKKAL-------EIDPNYELSIYNSGLAYEQKNQNEEALKYYNKVQQINPN 1403



 Score = 54.3 bits (129), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 87/420 (20%), Positives = 187/420 (44%), Gaps = 46/420 (10%)

Query: 114  STKAIEDLTQLVEDTSVDPKIKVNAHIKRAVVHLHAASDFTKAFADLDEAEKVDPNVADS 173
            S K +E+  Q V  T+ D       H+++A ++L       ++   L +A ++DPN  D+
Sbjct: 1693 SEKDLEEKLQKVPVTAKD-------HLEQAFLYL-TIKKVEQSIELLKKAIEIDPNYYDA 1744

Query: 174  YYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQRHFVVHKMIVPGDRERVEQSLKE 233
            Y + G IY     +E+A++N +K I +N     +      + + M++  D  ++ ++ + 
Sbjct: 1745 YDKLGLIYKQKEMFEDAIQNYEKAIEINSKGFES------IYNLMVIYLDLIKINEAAQF 1798

Query: 234  FRNFVDTHSNVVEACTLFAQVLVDQEDFDGAEEYFNRSIRVDPENASLYVHRAMLMLQAR 293
             +  ++ + +  E          D+   + A   F+++I +D ++ + YV    + L+  
Sbjct: 1799 HQKILEKNKDCSETNYRLGLAYQDKNMLNEAIVLFSKAIELDSKHVNAYVKLGNVYLKLI 1858

Query: 294  GNVDEAIKLIEKAISIDKSCMFAYETLGTIEVQRGRLEEAVKCFNKALPLARDEAELSHI 353
               D+A+++ +K + ID   + AY  +G +   + + + A++ + KAL     E    ++
Sbjct: 1859 M-YDKALEVFQKILEIDTKQVVAYNNIGLVYYNQKKDDLALEYYQKAL-----EINPKYL 1912

Query: 354  YSLRDAAIA------QMKVCERYNIKKKVSPR-SQNITKNEKLAIKQ--LRENNDI--II 402
             SL ++ +         K  E Y     ++P   Q + +  KL +K   +++  D+   +
Sbjct: 1913 LSLYNSGLVYETKNQNDKALECYQKALDINPNDKQTLDRMMKLFLKTGIIKDEFDVDNFL 1972

Query: 403  RPADKGGKTVV----MDKADYTQKM--TSILNSNDYEIIPGDPTKTIEESEKYGNLENES 456
            +  +K  ++           Y++KM   SI   N  + I  DP    E  +K G +  E 
Sbjct: 1973 QKMEKNTQSAYDFYKQGYTFYSKKMKDQSIKCLN--KAIEIDPN-FFEAYDKLGLIYEEK 2029

Query: 457  GQKHAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNF 516
            G         +A  +  +  +++P   ++Y + G IY    Q  E++    K   ++PN+
Sbjct: 2030 GM------LDQAIENYKKVIEINPKFINAYNKLGNIYLDKKQLNESISYYQKCTEIDPNY 2083



 Score = 52.4 bits (124), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 71/308 (23%), Positives = 127/308 (41%), Gaps = 38/308 (12%)

Query: 224 RERVEQSLKEFRNFVDTHSNVVEACTLFAQVLVDQEDFDGAEEYFNRSIRVDPENASLYV 283
           ++ ++++++ F   ++  SN  EA          +   D + E FN+ + ++P     Y 
Sbjct: 22  KKMIDEAIECFNKVIEIDSNNAEAYYSLGCCFELKNLVDDSLESFNKVLSINPNYLKAYA 81

Query: 284 HRAMLMLQARGNVDEAIKLIEKAISIDKSCMFAYETLGTIEVQRGRLEEAVKCFNKALPL 343
            +A + L+ + N+DEAI  +++AI ID + + AY+ L     ++ +L++  +C+ K + +
Sbjct: 82  SKADIHLK-KSNIDEAIISLKQAIEIDPNFVQAYQKLAQAYKKQNKLDQITECYKKIIEI 140

Query: 344 ARDEAELSHIYSLRDAAIAQMKVCERYNIKKKVSPRSQNITKNEKLAIKQLRENN--DII 401
                E  H  +L      Q+   E Y   KK+        K    A   L  N   D +
Sbjct: 141 EPKNMEAFHELALTYEIKGQID--EAYAWYKKILTIDPQFIK----AYISLARNYFCDSM 194

Query: 402 IRPADKGGKTVVMDKADYTQKMTSILNSNDYEIIPGDPTKTIEESEKYGNLENESGQKHA 461
              A +  KT +                   EI P     + E  E+ G +  +      
Sbjct: 195 TEEAIRMLKTAL-------------------EIDPN----SAEAHERLGFIYEKQ----- 226

Query: 462 ASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARA 521
            S F  A      A + +PN    Y     IY L    +EA++ L K I ++PNF  A  
Sbjct: 227 -SMFDSALISYKIALEKNPNFLSVYISLAYIYFLKQLDQEAIKQLRKAIEIDPNFVQAYE 285

Query: 522 QRHFVWTS 529
           +  FV+ +
Sbjct: 286 RLGFVFQN 293



 Score = 47.4 bits (111), Expect = 0.019,   Method: Compositional matrix adjust.
 Identities = 64/291 (21%), Positives = 132/291 (45%), Gaps = 41/291 (14%)

Query: 62   LDLLSKAKRAFEHEDYLTAIRHCTEEIESTSSNHTKALA----RLLRATVYIFTSQSTKA 117
            LDL+   + A  H+  L   + C+E      +N+   LA     +L   + +F+    KA
Sbjct: 1787 LDLIKINEAAQFHQKILEKNKDCSE------TNYRLGLAYQDKNMLNEAIVLFS----KA 1836

Query: 118  IEDLTQLVEDTSVDPKIKVNAHIKRAVVHLHAASDFTKAFADLDEAEKVDPNVADSYYQR 177
            IE          +D K  VNA++K   V+L     + KA     +  ++D     +Y   
Sbjct: 1837 IE----------LDSK-HVNAYVKLGNVYLKLIM-YDKALEVFQKILEIDTKQVVAYNNI 1884

Query: 178  GQIYCLFGQYEEALRNLDKTIALNPNFHVARAQRHFVVHKMIVPGDRERVEQSLKEFRNF 237
            G +Y    + + AL    K + +NP + ++      + +  +V   + + +++L+ ++  
Sbjct: 1885 GLVYYNQKKDDLALEYYQKALEINPKYLLS------LYNSGLVYETKNQNDKALECYQKA 1938

Query: 238  VDTHSN----VVEACTLFAQVLVDQEDFDGAEEYFNRSIRVDPENASLY-VHRAMLMLQA 292
            +D + N    +     LF +  + +++FD      N   +++    S Y  ++      +
Sbjct: 1939 LDINPNDKQTLDRMMKLFLKTGIIKDEFDVD----NFLQKMEKNTQSAYDFYKQGYTFYS 1994

Query: 293  RGNVDEAIKLIEKAISIDKSCMFAYETLGTIEVQRGRLEEAVKCFNKALPL 343
            +   D++IK + KAI ID +   AY+ LG I  ++G L++A++ + K + +
Sbjct: 1995 KKMKDQSIKCLNKAIEIDPNFFEAYDKLGLIYEEKGMLDQAIENYKKVIEI 2045



 Score = 47.0 bits (110), Expect = 0.023,   Method: Compositional matrix adjust.
 Identities = 60/267 (22%), Positives = 114/267 (42%), Gaps = 29/267 (10%)

Query: 84  CTEEIESTSSNHTKALARLLRATVYIFTSQSTKAIEDLTQLVEDTSVDPK-IKVNAHIKR 142
           C +     + N  K L  L  A  Y  ++   +AIE   ++++   +DPK    N +I  
Sbjct: 575 CYQSALQVNENSLKILNNLGYA--YYKSNMHDQAIEIYKRVIQ---IDPKSFLANYNIG- 628

Query: 143 AVVHLHAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNP 202
             V     + F +A     + E++ P     + + G +Y     YEEAL N +K      
Sbjct: 629 --VAYQMKNMFDEAIEFYKKVEEIFPKYFTVFIRLGNVYGEKKMYEEALENYNKV----- 681

Query: 203 NFHVARAQRHFVVHKMIVPGDRERV------EQSLKEFRNFVDTHSNVVEACTLFAQVLV 256
                   + F + K+    + E V      E+ +  +   ++ +   V+A    A +  
Sbjct: 682 --------KDFSMEKLEEISNLENVDKMNLIEEVIGCYIKAIELNPEYVQAYYYLAIIYQ 733

Query: 257 DQEDFDGAEEYFNRSIRVDPENASLYVHRAMLMLQARGNVDEAIKLIEKAISIDKSCMFA 316
           +    D A +Y+ + I++DP++A  Y+      L  +   D+A++   K I I+     A
Sbjct: 734 NTNRVDEAIDYYQKVIQLDPQHADAYLELGNKYLH-KNLTDKALECFYKTIEIEPKKYDA 792

Query: 317 YETLGTIEVQRGRLEEAVKCFNKALPL 343
           Y  +G I   + + ++A++ F KAL +
Sbjct: 793 YNGVGAIFYAQKKDDQALEYFKKALEI 819



 Score = 46.6 bits (109), Expect = 0.034,   Method: Compositional matrix adjust.
 Identities = 73/383 (19%), Positives = 168/383 (43%), Gaps = 46/383 (12%)

Query: 153  FTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQRH 212
            + KA     +  ++DP  A +Y   G ++      + AL   +K + +NP + ++     
Sbjct: 1588 YDKALECYKKVLEIDPKKAVAYNNIGLVHYNQNMDDLALEYYNKALEVNPKYELS----- 1642

Query: 213  FVVHKMIVPGDRERVEQSLKEFRNFVDTHSNVVEACTLFAQVLVDQEDFDGAEEYFNRSI 272
             + +  ++   + + +++L+ ++  +  +    +  T   ++     +   +E+     +
Sbjct: 1643 -IYNSGLIYEQKNQNDKALECYKKVLAINPTDKKTLTRIEKINEKNVNLKLSEKDLEEKL 1701

Query: 273  RVDPENASLYVHRAMLMLQARGNVDEAIKLIEKAISIDKSCMFAYETLGTIEVQRGRLEE 332
            +  P  A  ++ +A L L  +  V+++I+L++KAI ID +   AY+ LG I  Q+   E+
Sbjct: 1702 QKVPVTAKDHLEQAFLYLTIK-KVEQSIELLKKAIEIDPNYYDAYDKLGLIYKQKEMFED 1760

Query: 333  AVKCFNKALPLARDEAELSHIYSLRDAAIAQMKVCERYNIKKKVSPRSQNITK-NEKLAI 391
            A++ + KA+ +  +      IY+L    +  +K+ E     +K+  ++++ ++ N +L +
Sbjct: 1761 AIQNYEKAIEI--NSKGFESIYNLMVIYLDLIKINEAAQFHQKILEKNKDCSETNYRLGL 1818

Query: 392  KQLREN--NDII-----------------IRPADKGGKTVVMDKADYTQKMTSILNSNDY 432
                +N  N+ I                 ++  +   K ++ DKA   +    IL  +  
Sbjct: 1819 AYQDKNMLNEAIVLFSKAIELDSKHVNAYVKLGNVYLKLIMYDKA--LEVFQKILEIDTK 1876

Query: 433  EIIPGDPTKTIEESEKYGNLENESGQKHAASDFTKAFADLDEAEKVDPNVADSYYQRGQI 492
            +++  +    +  ++K  +L  E  QK               A +++P    S Y  G +
Sbjct: 1877 QVVAYNNIGLVYYNQKKDDLALEYYQK---------------ALEINPKYLLSLYNSGLV 1921

Query: 493  YCLFGQYEEALRNLDKTIALNPN 515
            Y    Q ++AL    K + +NPN
Sbjct: 1922 YETKNQNDKALECYQKALDINPN 1944



 Score = 41.2 bits (95), Expect = 1.3,   Method: Compositional matrix adjust.
 Identities = 35/176 (19%), Positives = 83/176 (47%), Gaps = 9/176 (5%)

Query: 166 VDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQRHFVVHKMIVPGDRE 225
           ++P    +    G  Y     +++A+    K I ++PN+H+A        +  I    ++
Sbjct: 480 INPQYIKALNNLGLAYEYQQMFDQAIECYKKAIEIDPNYHLA------YYNCGISYASKK 533

Query: 226 RVEQSLKEFRNFVDTHSNVVEACTLFAQVLVDQEDFDGAEEYFNRSIRVDPENASLYVHR 285
            V+++++ ++  ++ +   + A T    +   Q+ +D A E +  +++V+ EN SL +  
Sbjct: 534 MVDEAIECYKKVLEINPQYLNASTNMGYLYSQQKMYDKAIECYQSALQVN-EN-SLKILN 591

Query: 286 AMLMLQARGNV-DEAIKLIEKAISIDKSCMFAYETLGTIEVQRGRLEEAVKCFNKA 340
            +     + N+ D+AI++ ++ I ID     A   +G     +   +EA++ + K 
Sbjct: 592 NLGYAYYKSNMHDQAIEIYKRVIQIDPKSFLANYNIGVAYQMKNMFDEAIEFYKKV 647


>gi|50413212|ref|XP_457226.1| DEHA2B06094p [Debaryomyces hansenii CBS767]
 gi|49652891|emb|CAG85221.1| DEHA2B06094p [Debaryomyces hansenii CBS767]
          Length = 606

 Score = 81.3 bits (199), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 93/384 (24%), Positives = 170/384 (44%), Gaps = 46/384 (11%)

Query: 14  ISKRSFFKPSKQFIKTYLKSFPNDPILQPDGLSNGVELT-----------NGDTNESHEL 62
           +  R+   PS   I ++  +F   P   P+GLS   E +           N +T E +E 
Sbjct: 239 LKNRTLELPSASTIGSFFGAFV--PETNPEGLSESSEGSDKFLFDALANINSNTQEGYEK 296

Query: 63  --DLLSKAKRAFEHEDYLTAIRHCTEEIESTSSNHTKA-LARLLRATVYIFTSQSTKAIE 119
              L ++A  A+             EE+ + S    KA +A    A +    +  T A  
Sbjct: 297 ADTLFNQAVEAYN-----------IEELTNKSDAAAKASIALEYSAAIKFLKNDPTAAAS 345

Query: 120 DLTQLVEDTSVDPKIKVNAHIKRAVVHLHAASDFTKAFADLDEAEKVDPNVADSYYQRGQ 179
           D+ + +   ++ P+ +   +I RA+++   AS F +A +D +EA++++P   D++Y  GQ
Sbjct: 346 DIAKAM---ALKPRPRT--YIFRALINADKAS-FAEAISDFEEAKRINPKFPDTFYHLGQ 399

Query: 180 IYCLFGQYEEALRNLDKTIALNPNFHVARAQRHFVVHKMIVPGDRERVEQSLKEFRNFVD 239
           +Y L G  ++A  N      LNPN   A  Q   + +K    GD +  E    E +    
Sbjct: 400 LYYLTGDLQKAEENFTLAKDLNPNNVYAHIQLACITYKN---GDIKAAEDKFTEAKLKFP 456

Query: 240 THSNVVEACTLFAQVLVDQEDFDGAEEYFNRSIRVDPE------NASLYVHRAMLM-LQA 292
           T     E    + ++L D+ D   A + F+ + R+          A   +++A L+  ++
Sbjct: 457 TSP---EIPNYYGEILADRGDIQAACKQFDTAARLQTALPTYSVGALPLINKATLISRES 513

Query: 293 RGNVDEAIKLIEKAISIDKSCMFAYETLGTIEVQRGRLEEAVKCFNKALPLARDEAELSH 352
              +DE+ KL+  A  +D     A  +L  I++Q+ +++EA+  F ++  LAR   E   
Sbjct: 514 LERMDESEKLLTDACELDPKSELARISLAQIKLQKEQVDEAIVLFEESSNLARTIEEKVQ 573

Query: 353 IYSLRDAAIAQMKVCERYNIKKKV 376
             S  +A   Q ++     + KK+
Sbjct: 574 ATSFAEATKMQKRIKNDPILTKKI 597



 Score = 45.8 bits (107), Expect = 0.051,   Method: Compositional matrix adjust.
 Identities = 26/86 (30%), Positives = 45/86 (52%), Gaps = 1/86 (1%)

Query: 463 SDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQ 522
           + F +A +D +EA++++P   D++Y  GQ+Y L G  ++A  N      LNPN   A  Q
Sbjct: 371 ASFAEAISDFEEAKRINPKFPDTFYHLGQLYYLTGDLQKAEENFTLAKDLNPNNVYAHIQ 430

Query: 523 RHFVWTSTLAELMAFSDEFMIPKITY 548
              + T    ++ A  D+F   K+ +
Sbjct: 431 LACI-TYKNGDIKAAEDKFTEAKLKF 455


>gi|298252154|ref|ZP_06975957.1| serine/threonine protein kinase with TPR repeats [Ktedonobacter
           racemifer DSM 44963]
 gi|297546746|gb|EFH80614.1| serine/threonine protein kinase with TPR repeats [Ktedonobacter
           racemifer DSM 44963]
          Length = 956

 Score = 81.3 bits (199), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 89/415 (21%), Positives = 177/415 (42%), Gaps = 42/415 (10%)

Query: 129 SVDPKIKVNAHIKRAVVHLHAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYE 188
           ++DP+  V     R  + L     +T+A A   +A  +DP+ +D +   G + CL  +Y+
Sbjct: 543 ALDPRSAV--MYNRKGLALIGLKRYTEAVAVYKQATILDPSYSDPFGNLGYVLCLLQRYD 600

Query: 189 EALRNLDKTIALNPNFHVARAQRHFVVHKMIVPGDRERVEQSLKEFRNFVDTHSNVVEAC 248
           EAL+  ++ I L+P F  A   + +V++ +      +R +++L      +    N V   
Sbjct: 601 EALQACEEAIRLDPQFTQAYGNKAWVLNNL------KRYDEALLASEAALRLEPNNVTYL 654

Query: 249 TLFAQVLVDQEDFDGAEEYFNRSIRVDPENASLYVHRAMLMLQARGNVDEAIKLIEKAIS 308
                  +     D A + ++  +R+D    S Y+++ ++    R    EA++++E+A  
Sbjct: 655 IRKGNAFLGLRRDDEALQVYDLVLRLDSSAISAYINKGIIYKSQR-RYPEALQMLEQAQR 713

Query: 309 IDKSCMFAYETLGTIEVQRGRLEEAVKCFNKALPLARDEAELSHIYSLRDAAIAQM---- 364
           +D      Y   G +  +  R +EA+  F KA  L   +A+    Y  R  A+ ++    
Sbjct: 714 LDPRDALVYSDKGDVLYEMRRYQEALDAFEKAAELGSQDAK---SYRDRGDALYELGRYR 770

Query: 365 KVCERYNIKKKVSPRSQNITKNEKLAIKQLRENNDIIIRPADKGGKTVVMDKA------- 417
           +  E Y    ++SP       N+ LA+  L  + + +    D   +++V D         
Sbjct: 771 EALEMYEQLIRLSPSYATGYYNKGLALSALGRHQEAL----DAFEQSLVHDSTSLKFRSR 826

Query: 418 ------DYTQKMTSILNSNDYEIIPGDPTKTIEESEKYGNLENESGQKHAASDFTKAFAD 471
                 D  +   ++   ND  I+   P  TI        L  +     A   + +A A 
Sbjct: 827 RALALYDLGRNQEALDACND--ILRTHPNDTI-------TLNRKGNALLALRRYEEALAA 877

Query: 472 LDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQRHFV 526
            ++  ++D N   ++  RG I+    +Y+EAL   ++ + L+P + +A   +  V
Sbjct: 878 YEQVLRLDENFVAAHNNRGLIFKALKRYDEALEAYNQALRLDPKYALAYYNKGLV 932



 Score = 63.5 bits (153), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 64/271 (23%), Positives = 123/271 (45%), Gaps = 24/271 (8%)

Query: 268 FNRSIRVDPENASLYVHRAMLMLQARGNVDEAIKLIEKAISIDKSCMFAYETLGTIEVQR 327
           F ++I ++P NA  + ++ + +   +   +EA++  ++AI ID S M AY + G I    
Sbjct: 368 FEQAILLEPSNAEFHYNKGLTLANLK-RYEEALQAWDRAIQIDPSHMLAYSSKGWILTLV 426

Query: 328 GRLEEAVKCFNKALPLARDEAELSHIYSLRDAAIAQMKVCER----YNIKKKVSPRSQNI 383
           GR  EA++   +AL L  ++A     Y+ +  A+  ++  E     +    +++PR    
Sbjct: 427 GRDAEALQACEQALRLDPNDAA---SYTRKGNALWGLERYEEALDAHEDALRLNPRYTAA 483

Query: 384 TKNEKLAIKQLRENNDII--------IRPADKGGKTVVMDKADYTQKMTSILNSNDYEII 435
             N+ L +  ++   + I        I PA       +    +   +    + + D+ I 
Sbjct: 484 YNNKGLVLSAMKRYPEAIEAYEQAVRINPAYINAYISMARLLNTLGRYDEAIKACDHAIA 543

Query: 436 PGDPTKTIEESEKYGNLENESGQKHAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCL 495
             DP   +  + K   L    G K     +T+A A   +A  +DP+ +D +   G + CL
Sbjct: 544 L-DPRSAVMYNRKGLAL---IGLKR----YTEAVAVYKQATILDPSYSDPFGNLGYVLCL 595

Query: 496 FGQYEEALRNLDKTIALNPNFHVARAQRHFV 526
             +Y+EAL+  ++ I L+P F  A   + +V
Sbjct: 596 LQRYDEALQACEEAIRLDPQFTQAYGNKAWV 626



 Score = 63.2 bits (152), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 55/231 (23%), Positives = 113/231 (48%), Gaps = 8/231 (3%)

Query: 113 QSTKAIEDLTQLVEDTSVDPKIKVNAHIKRAVVHLHAASDFTKAFADLDEAEKVDPNVAD 172
           +STKA+ED     E        +   + ++ ++      D T+A A  ++A  ++P+ A+
Sbjct: 322 KSTKALEDALFACEQEIQRSPTRAALYNRKGLLLSDLLRD-TQALASFEQAILLEPSNAE 380

Query: 173 SYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQRHFVVHKMIVPGDRERVEQSLK 232
            +Y +G       +YEEAL+  D+ I ++P+  +A + + +++   +V  D E ++   +
Sbjct: 381 FHYNKGLTLANLKRYEEALQAWDRAIQIDPSHMLAYSSKGWIL--TLVGRDAEALQACEQ 438

Query: 233 EFRNFVDTHSNVVEACTLFAQVLVDQEDFDGAEEYFNRSIRVDPENASLYVHRAMLMLQA 292
             R       N   + T     L   E ++ A +    ++R++P   + Y ++  L+L A
Sbjct: 439 ALR----LDPNDAASYTRKGNALWGLERYEEALDAHEDALRLNPRYTAAYNNKG-LVLSA 493

Query: 293 RGNVDEAIKLIEKAISIDKSCMFAYETLGTIEVQRGRLEEAVKCFNKALPL 343
                EAI+  E+A+ I+ + + AY ++  +    GR +EA+K  + A+ L
Sbjct: 494 MKRYPEAIEAYEQAVRINPAYINAYISMARLLNTLGRYDEAIKACDHAIAL 544



 Score = 47.0 bits (110), Expect = 0.028,   Method: Compositional matrix adjust.
 Identities = 39/194 (20%), Positives = 87/194 (44%), Gaps = 7/194 (3%)

Query: 147 LHAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHV 206
           L+    + +A    ++  ++ P+ A  YY +G      G+++EAL   ++++  +     
Sbjct: 763 LYELGRYREALEMYEQLIRLSPSYATGYYNKGLALSALGRHQEALDAFEQSLVHDSTSLK 822

Query: 207 ARAQRHFVVHKMIVPGDRERVEQSLKEFRNFVDTHSNVVEACTLFAQVLVDQEDFDGAEE 266
            R++R   ++      D  R +++L    + + TH N           L+    ++ A  
Sbjct: 823 FRSRRALALY------DLGRNQEALDACNDILRTHPNDTITLNRKGNALLALRRYEEALA 876

Query: 267 YFNRSIRVDPENASLYVHRAMLMLQARGNVDEAIKLIEKAISIDKSCMFAYETLGTIEVQ 326
            + + +R+D    + + +R  L+ +A    DEA++   +A+ +D     AY   G +   
Sbjct: 877 AYEQVLRLDENFVAAHNNRG-LIFKALKRYDEALEAYNQALRLDPKYALAYYNKGLVLNL 935

Query: 327 RGRLEEAVKCFNKA 340
            GR +EA +  +K+
Sbjct: 936 VGRQQEAREALDKS 949



 Score = 44.3 bits (103), Expect = 0.15,   Method: Compositional matrix adjust.
 Identities = 55/235 (23%), Positives = 104/235 (44%), Gaps = 10/235 (4%)

Query: 109 IFTSQSTKAIEDLTQLVEDTSVDPKIKVNAHIKRAVVHLHAASDFTKAFADLDEAEKVDP 168
           I+ SQ  +  E L  L +   +DP+  +    K  V  L+    + +A    ++A ++  
Sbjct: 694 IYKSQR-RYPEALQMLEQAQRLDPRDALVYSDKGDV--LYEMRRYQEALDAFEKAAELGS 750

Query: 169 NVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQRHFVVHKMIVPGDRERVE 228
             A SY  RG      G+Y EAL   ++ I L+P++      +   +  +       R +
Sbjct: 751 QDAKSYRDRGDALYELGRYREALEMYEQLIRLSPSYATGYYNKGLALSAL------GRHQ 804

Query: 229 QSLKEFRNFVDTHSNVVEACTLFAQVLVDQEDFDGAEEYFNRSIRVDPENASLYVHRAML 288
           ++L  F   +   S  ++  +  A  L D      A +  N  +R  P N ++ ++R   
Sbjct: 805 EALDAFEQSLVHDSTSLKFRSRRALALYDLGRNQEALDACNDILRTHP-NDTITLNRKGN 863

Query: 289 MLQARGNVDEAIKLIEKAISIDKSCMFAYETLGTIEVQRGRLEEAVKCFNKALPL 343
            L A    +EA+   E+ + +D++ + A+   G I     R +EA++ +N+AL L
Sbjct: 864 ALLALRRYEEALAAYEQVLRLDENFVAAHNNRGLIFKALKRYDEALEAYNQALRL 918



 Score = 42.0 bits (97), Expect = 0.83,   Method: Compositional matrix adjust.
 Identities = 51/206 (24%), Positives = 90/206 (43%), Gaps = 26/206 (12%)

Query: 333 AVKCFNKALPLARDEAELSHIYSLRDAAIAQMKVCERYNIKKKVSPRSQNITKNEKLAIK 392
           A++ +N  LPLA ++A L         A+A+ +     +++  VS   Q +    K A+ 
Sbjct: 235 ALRQYNPTLPLAVEQAVLR--------ALAKQRTERHADVQAFVSALRQAVPMPAK-ALP 285

Query: 393 QLRENNDIIIRPA-----DKGGKTVVMDKADYTQ--KMTSILNSNDYEIIPGDPTKTIEE 445
               N  + I PA      +  KT     A  T+  K T  L    +        + I+ 
Sbjct: 286 STAANTPVSIAPAVGTESPQTEKTFQRTPAPETEAPKSTKALEDALFAC-----EQEIQR 340

Query: 446 SEKYGNLENESGQKHAASDF---TKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEA 502
           S     L N  G     SD    T+A A  ++A  ++P+ A+ +Y +G       +YEEA
Sbjct: 341 SPTRAALYNRKGL--LLSDLLRDTQALASFEQAILLEPSNAEFHYNKGLTLANLKRYEEA 398

Query: 503 LRNLDKTIALNPNFHVARAQRHFVWT 528
           L+  D+ I ++P+  +A + + ++ T
Sbjct: 399 LQAWDRAIQIDPSHMLAYSSKGWILT 424


>gi|365898041|ref|ZP_09436017.1| putative TPR domain protein; O-GlcNAc transferase related protein
           [Bradyrhizobium sp. STM 3843]
 gi|365421176|emb|CCE08559.1| putative TPR domain protein; O-GlcNAc transferase related protein
           [Bradyrhizobium sp. STM 3843]
          Length = 643

 Score = 81.3 bits (199), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 82/332 (24%), Positives = 145/332 (43%), Gaps = 35/332 (10%)

Query: 217 KMIVPGDRERVEQSLKEFRNFVDTHSNVVEACTLFAQVLVDQEDFDGAEEYFNRSIRVDP 276
           +M+  G     EQ+ +        H++ ++A  L    L   E    A E+F R+I  +P
Sbjct: 33  RMLRAGQVVEAEQACRRALTVDAGHADALDAMGLVCAALARHE---LAIEWFARAITQNP 89

Query: 277 ENASLYVHRAMLMLQARGNVDEAIKLIEKAISIDKSCMFAYETLGTIEVQRGRLEEAVKC 336
             A  +V+    +L+ RG +DEA+K  ++A+ +      ++E L  +  Q+GRL+EA + 
Sbjct: 90  TVADYFVNLGQ-VLRERGRLDEAVKCFDRALQLKPDVPESWEALAAVLHQQGRLDEAAQA 148

Query: 337 FNKALPLARDEAELS-HIYSLRDAAIAQMKVCERYNIKKKVSPRSQNITKNEKLAIKQLR 395
           +++AL LA D AE+   +  L  A   Q++    ++   K  P       N  L      
Sbjct: 149 YDRALQLAPDRAEIWFRLGELLKAQERQLEAALSFDEALKFKPDDLEAANNAGLIYFNTE 208

Query: 396 ENNDIIIR-------PADKGG----KTVVMDKA-DYTQKMTSILNSNDYEIIPGDPTKTI 443
              D I R        AD+ G    KT+ + +   Y +   +      + + P DP    
Sbjct: 209 RYEDAIARFDQSLRLKADQPGVLCLKTISLRRLRRYEEAFEA--GKRAHALAPHDP---- 262

Query: 444 EESEKYGNLENESGQKHAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEAL 503
           + +  +G +    G+      + +A A  D+A  + P+ AD +  RG       ++EEA 
Sbjct: 263 DIANSFGCVLQNLGR------YDEAVAVFDKAIAIRPDFADFHNHRGTSLAELHRFEEAF 316

Query: 504 RNLDKTIALNPNFHVARAQRHFVWTSTLAELM 535
            + ++ IAL P+     A  H  W + L  L+
Sbjct: 317 ASFERAIALKPDL----ADAH--WNAALFRLL 342


>gi|145482337|ref|XP_001427191.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
 gi|124394271|emb|CAK59793.1| unnamed protein product [Paramecium tetraurelia]
          Length = 610

 Score = 80.9 bits (198), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 88/399 (22%), Positives = 170/399 (42%), Gaps = 58/399 (14%)

Query: 126 EDTSVDPKIKVNAHIKR--AVVHLHAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCL 183
           +  S++PK+  NA   +  A+  L    +  K +   DEA  +DP    +  ++G     
Sbjct: 135 QTISINPKV-FNAQKNKGNALAKLKLYQEAIKCY---DEAISIDPQNQSARNKKGNALIC 190

Query: 184 FGQYEEALRNLDKTIALNPNFHVARAQRHFVVHKMIVPGDRERVEQSLKEFRNFVDTHSN 243
             QY+EA++  D+ I++NP F      +   + ++       + +++LK +   +  +  
Sbjct: 191 LKQYQEAIKCYDEAISINPKFSNVWKNKGNTLAEL------HQHQEALKSYEESILINPQ 244

Query: 244 VVEACTLFAQVLVDQEDFDGAEEYFNRSIRVDPENASLYVHRAMLMLQARGNVDEAIKLI 303
            ++A      VL   + +  A + F+ +I ++P+    +  +    L       EAI+  
Sbjct: 245 QIDAWYGKGLVLTQLKQYKHAIQSFDEAISINPKYNDAWNGKGN-ALAKLNQYQEAIQSF 303

Query: 304 EKAISIDKSCMFAYETLGTIEVQRGRLEEAVKCFNKALPLARDEAELSHIYSLRDAAIAQ 363
            KAISID  C++A+   G    +     EA+KC+N+A+ +     +  + +  +  ++A+
Sbjct: 304 NKAISIDPKCVYAFYNKGLALARLQHYREAIKCYNEAISI---NPKYGYAFYNKGNSLAR 360

Query: 364 MKVCERYNIKKKVSPRSQNITKNEKLAIKQLRENNDIIIRP-----ADKGGKTVVMDKAD 418
           ++  +                     AIK   E   I I P      +  GK +V+    
Sbjct: 361 LQHYQE--------------------AIKCYDE--AIFINPKFDTAWNIKGKVLVL--LT 396

Query: 419 YTQKMTSILNSNDYEIIPGDPTKTIEESEKYGNLENESGQKHA-ASDFTKAFADLDEAEK 477
           Y Q      +    E I  +P        +Y +     GQ  A    + +A    DEA  
Sbjct: 397 YYQHAIKSFD----EAISINP--------QYNDAWFSKGQALARLKQYQEAIKSFDEAIS 444

Query: 478 VDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNF 516
           ++P   D+++ +GQ      QY+EA+++ D+ I +NPN 
Sbjct: 445 INPEQNDAWFSKGQALASLKQYQEAIKSYDEAIFINPNL 483



 Score = 67.8 bits (164), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 77/392 (19%), Positives = 165/392 (42%), Gaps = 40/392 (10%)

Query: 145 VHLHAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNF 204
           + L     + +A    DEA  ++P  A ++  +GQ      QY+EA++  D+ I+++P +
Sbjct: 16  LSLVCLKQYNEAIKCYDEAISINPKYASAWQGKGQALANLKQYQEAIKCYDQAISIDPKY 75

Query: 205 HVARAQRHFVVHKMIVPGDRERVEQSLKEFRNFVDTHSNVVEACTLFAQVLVDQEDFDGA 264
             A   +   +       + ++ ++++K +   +                L + +++  A
Sbjct: 76  ASAWQGKGQAL------ANLKQYQEAIKCYDQAISIDPKYYPTYYYKGLSLAELKEYQEA 129

Query: 265 EEYFNRSIRVDPE--NASLYVHRAMLMLQARGNVDEAIKLIEKAISIDKSCMFAYETLGT 322
            + +N++I ++P+  NA      A+  L+      EAIK  ++AISID     A    G 
Sbjct: 130 IKCYNQTISINPKVFNAQKNKGNALAKLKL---YQEAIKCYDEAISIDPQNQSARNKKGN 186

Query: 323 IEVQRGRLEEAVKCFNKALPLARDEAELSHIYSLRDAAIAQM----KVCERYNIKKKVSP 378
             +   + +EA+KC+++A+ +     + S+++  +   +A++    +  + Y     ++P
Sbjct: 187 ALICLKQYQEAIKCYDEAISI---NPKFSNVWKNKGNTLAELHQHQEALKSYEESILINP 243

Query: 379 RSQNITKNEKLAIKQLRE--------NNDIIIRPA---DKGGKTVVMDKADYTQKMTSIL 427
           +  +    + L + QL++        +  I I P       GK   + K +  Q+     
Sbjct: 244 QQIDAWYGKGLVLTQLKQYKHAIQSFDEAISINPKYNDAWNGKGNALAKLNQYQEAIQSF 303

Query: 428 NSNDYEIIPGDPTKTIEESEKYGNLENESGQKHAASDFTKAFADLDEAEKVDPNVADSYY 487
           N    + I  DP              N+         + +A    +EA  ++P    ++Y
Sbjct: 304 N----KAISIDPKCVYA-------FYNKGLALARLQHYREAIKCYNEAISINPKYGYAFY 352

Query: 488 QRGQIYCLFGQYEEALRNLDKTIALNPNFHVA 519
            +G        Y+EA++  D+ I +NP F  A
Sbjct: 353 NKGNSLARLQHYQEAIKCYDEAIFINPKFDTA 384


>gi|386002402|ref|YP_005920701.1| Tetratricopeptide repeat family [Methanosaeta harundinacea 6Ac]
 gi|357210458|gb|AET65078.1| Tetratricopeptide repeat family [Methanosaeta harundinacea 6Ac]
          Length = 1348

 Score = 80.9 bits (198), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 84/414 (20%), Positives = 173/414 (41%), Gaps = 60/414 (14%)

Query: 147 LHAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHV 206
           L+   ++ +A  D  EA ++DP     +Y +G  +   G+Y+EA++  ++ I L+P +  
Sbjct: 70  LYLQGNYDEAIQDYKEAIRLDPEFVWPWYNKGLAFEKQGKYDEAIKAYNEAIRLDPEYAN 129

Query: 207 ARAQRHFVVHKMIVPGDRERVEQSLKEFRNFVDTHSNVVEACTLFAQVLVDQEDFDGAEE 266
           A   + + ++       + + ++++K +   +  +     A       L  Q ++D A +
Sbjct: 130 AWHNKGYALYL------QGKYDEAIKAYNEAIRLYPEYANAWNSKGYALYSQGNYDEAIK 183

Query: 267 YFNRSIRVDPE------------------NASLYVHRAMLMLQAR--------------- 293
            +N +IR+DPE                    ++Y +   + L                  
Sbjct: 184 AYNEAIRLDPEFMWPWRNKGDTLFSQGKYELAIYAYDEAIRLNPEDLNSWINKGAALYRL 243

Query: 294 GNVDEAIKLIEKAISIDKSCMFAYETLGTIEVQRGRLEEAVKCFNKALPLARDEAELSHI 353
           G  DEAI+   +AI +D   ++A+   G     +G+ +EA++ +++A+ L+ + A+  + 
Sbjct: 244 GKYDEAIRASNEAIRLDPENVYAWHNKGVALNSQGKYDEAIQAYDEAIRLSPEYADAWN- 302

Query: 354 YSLRDAAIAQMK---VCERYNIKKKVSPRSQNITKNEKLAIKQLRENNDIIIRPADKGGK 410
               +A + Q K     +  N    + P + N    + +A+   R  +D  I+  D+  +
Sbjct: 303 -RKGEALLHQGKYDEAIQASNEAISLDPENANGWNIKGVALYN-RGKSDEAIKAYDEAIR 360

Query: 411 TVVMDKADYTQKMTSILNSNDY--------EIIPGDPTKTIEESEKYGNLENESGQKHAA 462
                   +  K  S+ +   Y        E I  DP        K   L N+       
Sbjct: 361 LSPEYADAWNNKGLSLKSQGKYDEAIQTFNETIRLDPEHVAAWYNKGLTLNNQ------- 413

Query: 463 SDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNF 516
             + +A    DEA +++P   D++Y +G       +Y+EA++  D+ I LNP +
Sbjct: 414 GKYDEAIQAFDEAIRLNPEYVDAWYSKGNALDSQSRYDEAIQAYDEVIKLNPEY 467



 Score = 76.6 bits (187), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 106/477 (22%), Positives = 205/477 (42%), Gaps = 59/477 (12%)

Query: 64  LLSKAKRAFEHEDYLTAIRHCTEEIESTSSNHTKALARLLRATVYIFTSQSTKAIEDLTQ 123
           L S+ K       Y  AIR   E++ S   N   AL RL +    I  S           
Sbjct: 206 LFSQGKYELAIYAYDEAIRLNPEDLNSWI-NKGAALYRLGKYDEAIRASN---------- 254

Query: 124 LVEDTSVDPKIKVNAHIKRAVVHLHAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCL 183
             E   +DP+     H K   V L++   + +A    DEA ++ P  AD++ ++G+    
Sbjct: 255 --EAIRLDPENVYAWHNKG--VALNSQGKYDEAIQAYDEAIRLSPEYADAWNRKGEALLH 310

Query: 184 FGQYEEALRNLDKTIALNPNFHVARAQRHFVVHKMIVPGDRERVEQSLKEFRNFVDTHSN 243
            G+Y+EA++  ++ I+L+P        +   ++      +R + ++++K +   +     
Sbjct: 311 QGKYDEAIQASNEAISLDPENANGWNIKGVALY------NRGKSDEAIKAYDEAIRLSPE 364

Query: 244 VVEACTLFAQVLVDQEDFDGAEEYFNRSIRVDPENASLYVHRAMLMLQARGNVDEAIKLI 303
             +A       L  Q  +D A + FN +IR+DPE+ + + ++  L L  +G  DEAI+  
Sbjct: 365 YADAWNNKGLSLKSQGKYDEAIQTFNETIRLDPEHVAAWYNKG-LTLNNQGKYDEAIQAF 423

Query: 304 EKAISIDKSCMFAYETLGTIEVQRGRLEEAVKCFNKALPLARDEAELSHIYSLRDAAIAQ 363
           ++AI ++   + A+ + G     + R +EA++ +++ + L     E +  ++ +  A   
Sbjct: 424 DEAIRLNPEYVDAWYSKGNALDSQSRYDEAIQAYDEVIKL---NPEYADAWNSKGTAFNS 480

Query: 364 MKVCERYNIKKKV-------SPRSQNITKNEKLAIKQLRENNDII--------IRPAD-- 406
                RYN   K        +P   +   N+ +A+  L +  + I        + P D  
Sbjct: 481 QG---RYNEAIKAFDEAIRRNPEYADAWNNKGVALVSLDKYEEAIQAFDEATRLNPEDAD 537

Query: 407 ----KGGKTVVMDKADYTQKMTSI---LNSNDYEIIPGDPTKTIEE--SEKYGNLENESG 457
               KG     + K   T ++ ++      +D    P D    + +  +     L  E+ 
Sbjct: 538 AWLKKGVAFYHLGKYKETIQVCNVSIQAYDDDLRWNPEDANARLSKGIALMLKGLALETL 597

Query: 458 QKHAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNP 514
            K+   D  +A+   DEA  ++P+   ++  RG      G+Y+EA++  D+ + LNP
Sbjct: 598 DKY--EDAVQAY---DEAISLNPDDVAAWENRGAALYSLGKYDEAVQAYDEVLRLNP 649



 Score = 74.3 bits (181), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 86/376 (22%), Positives = 167/376 (44%), Gaps = 37/376 (9%)

Query: 156 AFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQRHFVV 215
           AF   +E+   DP   D +  +G    L G Y+EA+++  + I L+P F      +    
Sbjct: 51  AFGIFNES---DP---DEWNNKGYALYLQGNYDEAIQDYKEAIRLDPEFVWPWYNKGLAF 104

Query: 216 HKMIVPGDRERVEQSLKEFRNFVDTHSNVVEACTLFAQVLVDQEDFDGAEEYFNRSIRVD 275
            K      + + ++++K +   +        A       L  Q  +D A + +N +IR+ 
Sbjct: 105 EK------QGKYDEAIKAYNEAIRLDPEYANAWHNKGYALYLQGKYDEAIKAYNEAIRLY 158

Query: 276 PENASLYVHRAMLMLQARGNVDEAIKLIEKAISIDKSCMFAYETLGTIEVQRGRLEEAVK 335
           PE A+ +  +    L ++GN DEAIK   +AI +D   M+ +   G     +G+ E A+ 
Sbjct: 159 PEYANAWNSKGY-ALYSQGNYDEAIKAYNEAIRLDPEFMWPWRNKGDTLFSQGKYELAIY 217

Query: 336 CFNKALPLARDEAELSHIYSLRDAAIAQM----KVCERYNIKKKVSPRSQNITKNEKLAI 391
            +++A+ L  ++    + +  + AA+ ++    +     N   ++ P +     N+ +A+
Sbjct: 218 AYDEAIRLNPEDL---NSWINKGAALYRLGKYDEAIRASNEAIRLDPENVYAWHNKGVAL 274

Query: 392 KQLRENNDIIIRPADKGGKTVVMDKADYTQKMTSILNSNDY--------EIIPGDPTKTI 443
              +   D  I+  D+  +        + +K  ++L+   Y        E I  DP    
Sbjct: 275 NS-QGKYDEAIQAYDEAIRLSPEYADAWNRKGEALLHQGKYDEAIQASNEAISLDP---- 329

Query: 444 EESEKYGNLENESGQKHAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEAL 503
            E+    N++  +      SD  +A    DEA ++ P  AD++  +G      G+Y+EA+
Sbjct: 330 -ENANGWNIKGVALYNRGKSD--EAIKAYDEAIRLSPEYADAWNNKGLSLKSQGKYDEAI 386

Query: 504 RNLDKTIALNPNFHVA 519
           +  ++TI L+P  HVA
Sbjct: 387 QTFNETIRLDPE-HVA 401



 Score = 64.7 bits (156), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 93/452 (20%), Positives = 189/452 (41%), Gaps = 78/452 (17%)

Query: 119 EDLTQLVEDTSVDPKIKVNAHIKRAVVHLHAASDFTKAFADLDEAEKVDPNVADSYYQRG 178
           E +    E   +DP+  V A   + +  L+    + +A    DEA +++P   D++Y +G
Sbjct: 384 EAIQTFNETIRLDPE-HVAAWYNKGLT-LNNQGKYDEAIQAFDEAIRLNPEYVDAWYSKG 441

Query: 179 QIYCLFGQYEEALRNLDKTIALNPNFHVARAQRHFVVHKMIVPGDRERVEQSLKEFRNFV 238
                  +Y+EA++  D+ I LNP +  A   +    +       + R  +++K F   +
Sbjct: 442 NALDSQSRYDEAIQAYDEVIKLNPEYADAWNSKGTAFNS------QGRYNEAIKAFDEAI 495

Query: 239 DTHSNVVEACTLFAQVLVDQEDFDGAEEYFNRSIRVDPENASLYVHRAM----------- 287
             +    +A       LV  + ++ A + F+ + R++PE+A  ++ + +           
Sbjct: 496 RRNPEYADAWNNKGVALVSLDKYEEAIQAFDEATRLNPEDADAWLKKGVAFYHLGKYKET 555

Query: 288 -----LMLQA-----RGNVDEAIKLIEKAISIDKSCMFAYETLGTIEVQRGRLEEAVKCF 337
                + +QA     R N ++A   + K I++    + A ETL        + E+AV+ +
Sbjct: 556 IQVCNVSIQAYDDDLRWNPEDANARLSKGIALMLKGL-ALETL-------DKYEDAVQAY 607

Query: 338 NKALPLARDEAELSHIYSLRDAAIAQM----KVCERYNIKKKVSPRSQNITKNEKLAIKQ 393
           ++A+ L  D+      +  R AA+  +    +  + Y+   +++P   N  K +  A+  
Sbjct: 608 DEAISLNPDDVA---AWENRGAALYSLGKYDEAVQAYDEVLRLNPEDANAWKKKGYALHS 664

Query: 394 LRENND--------IIIRPADKGGKTVVMDKADYTQKMTSILNSNDYEIIPGDPTKTIEE 445
           L E+ +        I + P D G   +        +K    +N+++  I   + T T  E
Sbjct: 665 LEEHEESVKALDEAIRLNPNDAGCWLIKSFNLLIIEKYDEAINASEEAIRAYNETITTYE 724

Query: 446 SEKYGNLENES-----------------------GQKHAASDFTKAFADLDEAEKVDPNV 482
                N EN +                       G++H  ++  +AF   +EA  ++P  
Sbjct: 725 EIVSLNPENSTASNIKSRTLIAKGNGWALKGIILGEQHEYNEAMQAF---NEAVSLNPAG 781

Query: 483 ADSYYQRGQIYCLFGQYEEALRNLDKTIALNP 514
           +  +  +G+     G+Y EA+  +D  I+LNP
Sbjct: 782 SFIWSFKGKYLNDQGKYYEAIEAIDMAISLNP 813



 Score = 63.5 bits (153), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 72/318 (22%), Positives = 144/318 (45%), Gaps = 38/318 (11%)

Query: 63  DLLSKAKRAFEH-EDYLTAIRHCTEEIESTSS----NHTKALARLLRATVYIFTSQSTKA 117
           D   K   AF H   Y   I+ C   I++       N   A ARL +    +    + + 
Sbjct: 537 DAWLKKGVAFYHLGKYKETIQVCNVSIQAYDDDLRWNPEDANARLSKGIALMLKGLALET 596

Query: 118 I---EDLTQLV-EDTSVDPKIKVNAHIKRAVVHLHAASDFTKAFADLDEAEKVDPNVADS 173
           +   ED  Q   E  S++P   V A   R    L++   + +A    DE  +++P  A++
Sbjct: 597 LDKYEDAVQAYDEAISLNPD-DVAAWENRGAA-LYSLGKYDEAVQAYDEVLRLNPEDANA 654

Query: 174 YYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQRHFVVHKMIVPGDRERV---EQS 230
           + ++G       ++EE+++ LD+ I LNPN       + F  + +I+    E +   E++
Sbjct: 655 WKKKGYALHSLEEHEESVKALDEAIRLNPNDAGCWLIKSF--NLLIIEKYDEAINASEEA 712

Query: 231 LKEFRNFVDTHSNVV------------EACTLFAQ---------VLVDQEDFDGAEEYFN 269
           ++ +   + T+  +V            ++ TL A+         +L +Q +++ A + FN
Sbjct: 713 IRAYNETITTYEEIVSLNPENSTASNIKSRTLIAKGNGWALKGIILGEQHEYNEAMQAFN 772

Query: 270 RSIRVDPENASLYVHRAMLMLQARGNVDEAIKLIEKAISIDKSCMFAYETLGTIEVQRGR 329
            ++ ++P  + ++  +    L  +G   EAI+ I+ AIS++     A+   G     +G+
Sbjct: 773 EAVSLNPAGSFIWSFKGK-YLNDQGKYYEAIEAIDMAISLNPESALAWNYKGAALRGQGK 831

Query: 330 LEEAVKCFNKALPLARDE 347
            EEA+  +++A+ L  D+
Sbjct: 832 HEEAILAYDEAIRLNPDD 849



 Score = 50.1 bits (118), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 52/229 (22%), Positives = 104/229 (45%), Gaps = 24/229 (10%)

Query: 137 NAHIKRAVVHLHAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQY-------EE 189
           NA  K+    LH+  +  ++   LDEA +++PN A  +  +     +  +Y       EE
Sbjct: 653 NAWKKKGYA-LHSLEEHEESVKALDEAIRLNPNDAGCWLIKSFNLLIIEKYDEAINASEE 711

Query: 190 ALRNLDKTI-------ALNPNFHVAR--------AQRHFVVHKMIVPGDRERVEQSLKEF 234
           A+R  ++TI       +LNP    A         A+ +    K I+ G++    ++++ F
Sbjct: 712 AIRAYNETITTYEEIVSLNPENSTASNIKSRTLIAKGNGWALKGIILGEQHEYNEAMQAF 771

Query: 235 RNFVDTHSNVVEACTLFAQVLVDQEDFDGAEEYFNRSIRVDPENASLYVHRAMLMLQARG 294
              V  +       +   + L DQ  +  A E  + +I ++PE+A  + ++    L+ +G
Sbjct: 772 NEAVSLNPAGSFIWSFKGKYLNDQGKYYEAIEAIDMAISLNPESALAWNYKGA-ALRGQG 830

Query: 295 NVDEAIKLIEKAISIDKSCMFAYETLGTIEVQRGRLEEAVKCFNKALPL 343
             +EAI   ++AI ++     A+   G     +G   EA++ +++A+ L
Sbjct: 831 KHEEAILAYDEAIRLNPDDEDAWNNKGLALYSQGNYSEAIQAYDRAIDL 879


>gi|428319183|ref|YP_007117065.1| Tetratricopeptide TPR_1 repeat-containing protein [Oscillatoria
           nigro-viridis PCC 7112]
 gi|428242863|gb|AFZ08649.1| Tetratricopeptide TPR_1 repeat-containing protein [Oscillatoria
           nigro-viridis PCC 7112]
          Length = 565

 Score = 80.9 bits (198), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 84/385 (21%), Positives = 155/385 (40%), Gaps = 50/385 (12%)

Query: 145 VHLHAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNF 204
           + LH      +A A  D+A +  P+  +++  RG      G++EEA+ + +K +   P++
Sbjct: 142 IALHNLGLLEEAIASYDKALEFKPDYHEAWNNRGNALGNLGRWEEAIASYEKVLEFKPDY 201

Query: 205 HVARAQRHFVVHKMIVPGDRERVEQSLKEFRNFVDTHSNVVEACTLFAQVLVDQEDFDGA 264
           H A   R       I  G+  R E+++  F   ++  ++  EA       L +    + A
Sbjct: 202 HEAWNNRG------ITLGNLGRWEEAIASFDKALEFKADYHEAWNNRGNALGNLGRLEEA 255

Query: 265 EEYFNRSIRVDPENASLYVHRAMLMLQARGNVDEAIKLIEKAISIDKSCMFAYETLGTIE 324
              F++++    +    + +R    L   G ++EAI   +KA+        A+   G   
Sbjct: 256 IASFDKALEFKADYHEAWNNRGN-ALGNLGRLEEAIASFDKALEFKADYHQAWNNRGITL 314

Query: 325 VQRGRLEEAVKCFNKALPLARDEAELSHIYSLRDAAIAQMKVCER----YNIKKKVSPRS 380
            + GRLEEA+  ++KAL +  D+      +  R  A+ ++   E     ++   ++ P  
Sbjct: 315 GKLGRLEEALASYDKALEIKPDD----EAWYNRGIALGKLGRWEEALASFDKALEIKPDK 370

Query: 381 QNITKNEKLAIKQLRENNDIIIRPADKGGKTVVMDKADYTQKMTSILNSNDYEIIPGDPT 440
                N  +A+  L    + I               A Y + +         EIIP D  
Sbjct: 371 DEAWYNRGIALDDLGRWEEAI---------------ASYDKAL---------EIIPDDAA 406

Query: 441 KTIEESEKYGNLENESGQKHAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYE 500
                    GNL              +A A  D+A ++ P+  +S+Y RG      G+ E
Sbjct: 407 WN-NRGIALGNL----------GRLEEAIASYDKALEIKPDSYESWYNRGSAMINLGRLE 455

Query: 501 EALRNLDKTIALNPNFHVARAQRHF 525
           EA+ + DK + + P+   A   R +
Sbjct: 456 EAIASYDKALEIKPDDDAAWYNRGY 480



 Score = 62.8 bits (151), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 93/397 (23%), Positives = 158/397 (39%), Gaps = 58/397 (14%)

Query: 127 DTSVDPKIKVNAHIKRAVVHLHAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQ 186
           D +++ K +  A   R V  L  +  + +A A  D+A +  P+  +++  RG      G+
Sbjct: 23  DETLEMKPEPQACYDRGVA-LGNSGRWEEAIASYDKALEFKPDYHEAWNNRGNALGNLGR 81

Query: 187 YEEALRNLDKTIALNPNFHVARAQRHFVVHKMIVPGDRERVEQSLKEFRNFVDTHSNVVE 246
           +EEA+ + DK +   P+  VA   R       I  G+  R E+ +  +   ++   +  +
Sbjct: 82  WEEAIASFDKALEFKPDDDVAWYNRG------IGLGNLGRWEEGIASYNKTLEIKPDYHK 135

Query: 247 ACTLFAQVLVDQEDFDGAEEYFNRSIRVDPENASLYVHRAMLMLQARGNVDEAIKLIEKA 306
           A       L +    + A   +++++   P+    + +R    L   G  +EAI   EK 
Sbjct: 136 AWYNRGIALHNLGLLEEAIASYDKALEFKPDYHEAWNNRGN-ALGNLGRWEEAIASYEKV 194

Query: 307 ISIDKSCMFAYETLGTIEVQRGRLEEAVKCFNKALPLARDEAE--------LSHIYSLRD 358
           +        A+   G      GR EEA+  F+KAL    D  E        L ++  L +
Sbjct: 195 LEFKPDYHEAWNNRGITLGNLGRWEEAIASFDKALEFKADYHEAWNNRGNALGNLGRLEE 254

Query: 359 AAIAQMKVCERYNIKKKVSPRSQNITKNEKLAIKQLRENNDIIIRPADKGGKTVVMDKAD 418
           A  +  K  E     K     + N   N    + +L E     I   DK     +  KAD
Sbjct: 255 AIASFDKALEF----KADYHEAWNNRGNALGNLGRLEE----AIASFDK----ALEFKAD 302

Query: 419 YTQKMTSILNSNDYEIIPGDPTKTIEESEKYGNLENESGQKHAASDFTKAFADLDEAEKV 478
           Y Q        N+  I  G          K G LE             +A A  D+A ++
Sbjct: 303 YHQAW------NNRGITLG----------KLGRLE-------------EALASYDKALEI 333

Query: 479 DPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPN 515
            P+  +++Y RG      G++EEAL + DK + + P+
Sbjct: 334 KPD-DEAWYNRGIALGKLGRWEEALASFDKALEIKPD 369



 Score = 61.2 bits (147), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 55/226 (24%), Positives = 106/226 (46%), Gaps = 12/226 (5%)

Query: 155 KAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQRHFV 214
           +A A  D+A +   +   ++  RG      G+ EEAL + DK + + P+           
Sbjct: 288 EAIASFDKALEFKADYHQAWNNRGITLGKLGRLEEALASYDKALEIKPDDEA-------W 340

Query: 215 VHKMIVPGDRERVEQSLKEFRNFVDTHSNVVEACTLFAQVLVDQEDFDGAEEYFNRSIRV 274
            ++ I  G   R E++L  F   ++   +  EA       L D   ++ A   +++++ +
Sbjct: 341 YNRGIALGKLGRWEEALASFDKALEIKPDKDEAWYNRGIALDDLGRWEEAIASYDKALEI 400

Query: 275 DPENASLYVHRAMLMLQARGNVDEAIKLIEKAISIDKSCMFAYETLGTIEVQRGRLEEAV 334
            P++A+ + +R  + L   G ++EAI   +KA+ I      ++   G+  +  GRLEEA+
Sbjct: 401 IPDDAA-WNNRG-IALGNLGRLEEAIASYDKALEIKPDSYESWYNRGSAMINLGRLEEAI 458

Query: 335 KCFNKALPLARDE--AELSHIYSLRDAAIAQMKVCERYNIKKKVSP 378
             ++KAL +  D+  A  +  YSLR+    +  +   YN   ++ P
Sbjct: 459 ASYDKALEIKPDDDAAWYNRGYSLRNLGRWEEAIAS-YNKALEIIP 503



 Score = 56.2 bits (134), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 61/267 (22%), Positives = 118/267 (44%), Gaps = 16/267 (5%)

Query: 88  IESTSSNHTKALARLLRATVYIFTSQSTKAIEDLTQLVED-TSVDPKIKVNAHIKRAV-- 144
           +E   ++  KAL    +A  +   +    A+ +L +L E   S D  ++  A   +A   
Sbjct: 252 LEEAIASFDKALE--FKADYHEAWNNRGNALGNLGRLEEAIASFDKALEFKADYHQAWNN 309

Query: 145 --VHLHAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNP 202
             + L       +A A  D+A ++ P+  +++Y RG      G++EEAL + DK + + P
Sbjct: 310 RGITLGKLGRLEEALASYDKALEIKPD-DEAWYNRGIALGKLGRWEEALASFDKALEIKP 368

Query: 203 NFHVARAQRHFVVHKMIVPGDRERVEQSLKEFRNFVDTHSNVVEACTLFAQVLVDQEDFD 262
           +   A   R   +       D  R E+++  +   ++   +   A       L +    +
Sbjct: 369 DKDEAWYNRGIALD------DLGRWEEAIASYDKALEIIPDDA-AWNNRGIALGNLGRLE 421

Query: 263 GAEEYFNRSIRVDPENASLYVHRAMLMLQARGNVDEAIKLIEKAISIDKSCMFAYETLGT 322
            A   +++++ + P++   + +R   M+   G ++EAI   +KA+ I      A+   G 
Sbjct: 422 EAIASYDKALEIKPDSYESWYNRGSAMINL-GRLEEAIASYDKALEIKPDDDAAWYNRGY 480

Query: 323 IEVQRGRLEEAVKCFNKALPLARDEAE 349
                GR EEA+  +NKAL +  D+ E
Sbjct: 481 SLRNLGRWEEAIASYNKALEIIPDDDE 507



 Score = 48.5 bits (114), Expect = 0.008,   Method: Compositional matrix adjust.
 Identities = 58/272 (21%), Positives = 102/272 (37%), Gaps = 19/272 (6%)

Query: 261 FDGAEEYFNRSIRVDPENASLYVHRAMLMLQARGNVDEAIKLIEKAISIDKSCMFAYETL 320
           F+    +F+ ++ + PE  + Y     + L   G  +EAI   +KA+        A+   
Sbjct: 15  FEKGRAFFDETLEMKPEPQACYDR--GVALGNSGRWEEAIASYDKALEFKPDYHEAWNNR 72

Query: 321 GTIEVQRGRLEEAVKCFNKALPLARDEAELSHIYSLRDAAIAQMKVCER----YNIKKKV 376
           G      GR EEA+  F+KAL    D+      +  R   +  +   E     YN   ++
Sbjct: 73  GNALGNLGRWEEAIASFDKALEFKPDD---DVAWYNRGIGLGNLGRWEEGIASYNKTLEI 129

Query: 377 SPRSQNITKNEKLAIKQLRENNDIIIRPADKGGKTVVMDKADY----TQKMTSILNSNDY 432
            P       N  +A+  L      ++  A       +  K DY      +  ++ N   +
Sbjct: 130 KPDYHKAWYNRGIALHNLG-----LLEEAIASYDKALEFKPDYHEAWNNRGNALGNLGRW 184

Query: 433 EIIPGDPTKTIEESEKYGNLENESGQKHA-ASDFTKAFADLDEAEKVDPNVADSYYQRGQ 491
           E       K +E    Y    N  G        + +A A  D+A +   +  +++  RG 
Sbjct: 185 EEAIASYEKVLEFKPDYHEAWNNRGITLGNLGRWEEAIASFDKALEFKADYHEAWNNRGN 244

Query: 492 IYCLFGQYEEALRNLDKTIALNPNFHVARAQR 523
                G+ EEA+ + DK +    ++H A   R
Sbjct: 245 ALGNLGRLEEAIASFDKALEFKADYHEAWNNR 276


>gi|209523829|ref|ZP_03272382.1| serine/threonine protein kinase with TPR repeats [Arthrospira
           maxima CS-328]
 gi|209495861|gb|EDZ96163.1| serine/threonine protein kinase with TPR repeats [Arthrospira
           maxima CS-328]
          Length = 754

 Score = 80.5 bits (197), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 98/421 (23%), Positives = 161/421 (38%), Gaps = 67/421 (15%)

Query: 131 DPKIKVNAHIKRAVVHLHAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEA 190
           DP +K  A +KR V  L A  D   A      + ++ P+ ++++ +R   Y    +YE+A
Sbjct: 361 DP-VKSEAALKRGVERLEAG-DPEAAIKAFTRSIQLFPDNSEAFRKRANAYYDLQKYEQA 418

Query: 191 LRNLDKTIALNPNFHVARAQRHFVVHKMIVPGDRERVEQSLKEFRNFVDTHSNVV----E 246
           + +  + I L+P        R    H+M             ++F N ++  + V+    E
Sbjct: 419 IADYTQAIKLDPTNPDIYFNRSLAYHQM-------------RDFGNAINDLNQVIRLNPE 465

Query: 247 ACTLFAQVLV---DQEDFDGAEEYFNRSIRVDPENASLYVHRAMLMLQARGNVDEAIKLI 303
               F Q  +    QE+++ A   +   IR  P N+  Y  R    +++ GN+   +   
Sbjct: 466 DTDAFYQRGLAHYSQENYEAAILDYTEVIRRQPNNSEAYRARGSAHVKS-GNLQAGMADY 524

Query: 304 EKAISIDKSCMFAYETLGTIEVQRGRLEEAVKCFNKALPLARDEAELSHIYSLRDAAIAQ 363
            +AI ++     AY   G      G  + A+  +N+ +    D AE            A 
Sbjct: 525 TEAIRLNPESAAAYYNRGRARFHLGDYQGALADYNQVISWEPDNAE------------AY 572

Query: 364 MKVCERY----NIKKKVSPRSQNITKNEKLAIKQLRENNDIIIRPADKGGKTVVMDKADY 419
              C  Y    N +  +   S++I  N                               DY
Sbjct: 573 GNRCSTYINLGNYEAAIESCSRSIQLNPT---------------------------AMDY 605

Query: 420 TQKMTSILNSNDYEIIPGDPTKTIEESEKYGNLENESGQKHA-ASDFTKAFADLDEAEKV 478
             +  + LN  +Y+   GD TK IE         +  G  H+ A D+  A AD  +A  +
Sbjct: 606 NNRCIAHLNVQNYDAAIGDCTKAIELEPNNSKAHSNRGLVHSLAEDYEAAIADYSQAISL 665

Query: 479 DPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQRHFVWTSTLAELMAFS 538
           +PN A+SY  R Q +   G Y EA+ +  + I + PN   A   R  V  S      A S
Sbjct: 666 NPNDAESYSNRAQAHAELGNYSEAIADYAQAIRIRPNLAGAFYGRGMVRASLGDRRGAIS 725

Query: 539 D 539
           D
Sbjct: 726 D 726



 Score = 69.7 bits (169), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 92/406 (22%), Positives = 163/406 (40%), Gaps = 63/406 (15%)

Query: 114 STKAIEDLTQLVEDTSVDPKIKVNAHIKRAVVHLHAASDFTKAFADLDEAEKVDPNVADS 173
           + KA     QL  D S   + + NA+        +    + +A AD  +A K+DP   D 
Sbjct: 384 AIKAFTRSIQLFPDNSEAFRKRANAY--------YDLQKYEQAIADYTQAIKLDPTNPDI 435

Query: 174 YYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQRHFVVHKMIVPGDRERVEQSLKE 233
           Y+ R   Y     +  A+ +L++ I LNP    A  QR    +       +E  E ++ +
Sbjct: 436 YFNRSLAYHQMRDFGNAINDLNQVIRLNPEDTDAFYQRGLAHYS------QENYEAAILD 489

Query: 234 FRNFVDTHSNVVEACTLFAQVLVDQEDFDGAEEYFNRSIRVDPENASLYVHRAMLMLQAR 293
           +   +    N  EA        V   +       +  +IR++PE+A+ Y +R        
Sbjct: 490 YTEVIRRQPNNSEAYRARGSAHVKSGNLQAGMADYTEAIRLNPESAAAYYNRGRARFHL- 548

Query: 294 GNVDEAIKLIEKAISIDKSCMFAYETLGTIEVQRGRLEEAVKCFNKAL---PLARDEAE- 349
           G+   A+    + IS +     AY    +  +  G  E A++  ++++   P A D    
Sbjct: 549 GDYQGALADYNQVISWEPDNAEAYGNRCSTYINLGNYEAAIESCSRSIQLNPTAMDYNNR 608

Query: 350 -LSHIYSLR-DAAIAQMKVCERYNIKKKVSPRSQNITKNEKLAIKQLRENNDIIIRPADK 407
            ++H+     DAAI     C +     ++ P +     N  L +  L E+ +  I     
Sbjct: 609 CIAHLNVQNYDAAIGD---CTK---AIELEPNNSKAHSNRGL-VHSLAEDYEAAI----- 656

Query: 408 GGKTVVMDKADYTQKMTSILNSNDYEIIPGDPTKTIEESEKYGNLENESGQKHA-ASDFT 466
                    ADY+Q ++  LN ND              +E Y N      Q HA   +++
Sbjct: 657 ---------ADYSQAIS--LNPND--------------AESYSN----RAQAHAELGNYS 687

Query: 467 KAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIAL 512
           +A AD  +A ++ PN+A ++Y RG +    G    A+ + ++   L
Sbjct: 688 EAIADYAQAIRIRPNLAGAFYGRGMVRASLGDRRGAISDFEQAGKL 733



 Score = 60.8 bits (146), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 62/271 (22%), Positives = 114/271 (42%), Gaps = 20/271 (7%)

Query: 72  FEHEDYLTAIRHCTEEIESTSSNHTKALARLLRATVYIFTSQSTKAIEDLTQLVEDTSVD 131
           +  E+Y  AI   TE I    +N     AR    + ++ +      + D T+ +    ++
Sbjct: 478 YSQENYEAAILDYTEVIRRQPNNSEAYRAR---GSAHVKSGNLQAGMADYTEAIR---LN 531

Query: 132 PKIKVNAHIKRAVVHLHAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEAL 191
           P+    A+  R     H   D+  A AD ++    +P+ A++Y  R   Y   G YE A+
Sbjct: 532 PE-SAAAYYNRGRARFHLG-DYQGALADYNQVISWEPDNAEAYGNRCSTYINLGNYEAAI 589

Query: 192 RNLDKTIALNPNF--HVARAQRHFVVHKMIVPGDRERVEQSLKEFRNFVDTHSNVVEACT 249
            +  ++I LNP    +  R   H  V         +  + ++ +    ++   N  +A +
Sbjct: 590 ESCSRSIQLNPTAMDYNNRCIAHLNV---------QNYDAAIGDCTKAIELEPNNSKAHS 640

Query: 250 LFAQVLVDQEDFDGAEEYFNRSIRVDPENASLYVHRAMLMLQARGNVDEAIKLIEKAISI 309
               V    ED++ A   ++++I ++P +A  Y +RA    +  GN  EAI    +AI I
Sbjct: 641 NRGLVHSLAEDYEAAIADYSQAISLNPNDAESYSNRAQAHAEL-GNYSEAIADYAQAIRI 699

Query: 310 DKSCMFAYETLGTIEVQRGRLEEAVKCFNKA 340
             +   A+   G +    G    A+  F +A
Sbjct: 700 RPNLAGAFYGRGMVRASLGDRRGAISDFEQA 730


>gi|225621427|ref|YP_002722686.1| TPR domain-containing protein [Brachyspira hyodysenteriae WA1]
 gi|225216248|gb|ACN84982.1| TPR domain-containing protein [Brachyspira hyodysenteriae WA1]
          Length = 453

 Score = 80.5 bits (197), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 64/228 (28%), Positives = 118/228 (51%), Gaps = 14/228 (6%)

Query: 117 AIEDLTQLVEDTSVDPKIKVNAHIKRAVVHLHAASDFTK-AFADLDEAEKVDPNVADSYY 175
           AI+D  + +   S+DP +  +A+  + +  L     F+K A  D ++A K++PN A +Y 
Sbjct: 185 AIKDFDKAL---SIDPNL-FDAYNNKGL--LEDELGFSKEAIKDFNKAIKLNPNYALAYN 238

Query: 176 QRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQRHFVVHKMIVPGDRERVEQSLKEFR 235
            RG      G YEEA+++ DK I LNPN+  A   R      + +       E+++++F 
Sbjct: 239 NRGNAKDNLGLYEEAIKDYDKAIKLNPNYAFAYNNRGNAKDNLGL------YEEAIEDFD 292

Query: 236 NFVDTHSNVVEACTLFAQVLVDQEDFDGAEEYFNRSIRVDPENASLYVHRAMLMLQARGN 295
             ++ + N  +A         D   ++ A + ++++I+++P     Y +R +  + + G 
Sbjct: 293 KAIELNPNYTDAYNNRGNAKYDLGLYEEAIKDYDKAIKLNPNYTDAYDNRGLSKI-SLGL 351

Query: 296 VDEAIKLIEKAISIDKSCMFAYETLGTIEVQRGRLEEAVKCFNKALPL 343
            +EAIK  +KAI ++ +  FAY   G  +   G  EEA+K ++KA+ L
Sbjct: 352 YEEAIKDYDKAIKLEANDAFAYCNRGFAKSHLGLHEEALKDYDKAIKL 399



 Score = 76.6 bits (187), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 78/271 (28%), Positives = 123/271 (45%), Gaps = 16/271 (5%)

Query: 264 AEEYFNRSIRVDPENASLYVHRAMLMLQARGNVDEAIKLIEKAISIDKSCMFAYETLGTI 323
           A +Y++ +I+++P  A  Y ++A+   +  G + EAI+  +KAI +     +AY   G +
Sbjct: 117 AIKYYDEAIKLNPNMADAYYNKAIAKTKL-GLLKEAIEEYDKAIELRADYTYAYYNRGLL 175

Query: 324 EVQRGRLEEAVKCFNKALPLARDEAELSHIYS----LRDAAIAQMKVCERYNIKKKVSPR 379
           +   G LEEA+K F+KAL +   +  L   Y+    L D      +  + +N   K++P 
Sbjct: 176 KSDLGLLEEAIKDFDKALSI---DPNLFDAYNNKGLLEDELGFSKEAIKDFNKAIKLNPN 232

Query: 380 ---SQNITKNEKLAIKQLRENNDIIIRPADKGGKTVVMDKADYTQKMTSILNSNDYEIIP 436
              + N   N K  +    E     I+  DK  K        Y  +  +  N   YE   
Sbjct: 233 YALAYNNRGNAKDNLGLYEE----AIKDYDKAIKLNPNYAFAYNNRGNAKDNLGLYEEAI 288

Query: 437 GDPTKTIEESEKYGNLENESGQ-KHAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCL 495
            D  K IE +  Y +  N  G  K+    + +A  D D+A K++PN  D+Y  RG     
Sbjct: 289 EDFDKAIELNPNYTDAYNNRGNAKYDLGLYEEAIKDYDKAIKLNPNYTDAYDNRGLSKIS 348

Query: 496 FGQYEEALRNLDKTIALNPNFHVARAQRHFV 526
            G YEEA+++ DK I L  N   A   R F 
Sbjct: 349 LGLYEEAIKDYDKAIKLEANDAFAYCNRGFA 379



 Score = 69.7 bits (169), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 57/212 (26%), Positives = 103/212 (48%), Gaps = 11/212 (5%)

Query: 134 IKVNAHIKRAVVHLHAASD----FTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEE 189
           IK+N +   A  +   A D    + +A  D D+A K++PN A +Y  RG      G YEE
Sbjct: 227 IKLNPNYALAYNNRGNAKDNLGLYEEAIKDYDKAIKLNPNYAFAYNNRGNAKDNLGLYEE 286

Query: 190 ALRNLDKTIALNPNFHVARAQRHFVVHKMIVPGDRERVEQSLKEFRNFVDTHSNVVEACT 249
           A+ + DK I LNPN+  A   R    + + +       E+++K++   +  + N  +A  
Sbjct: 287 AIEDFDKAIELNPNYTDAYNNRGNAKYDLGL------YEEAIKDYDKAIKLNPNYTDAYD 340

Query: 250 LFAQVLVDQEDFDGAEEYFNRSIRVDPENASLYVHRAMLMLQARGNVDEAIKLIEKAISI 309
                 +    ++ A + ++++I+++  +A  Y +R        G  +EA+K  +KAI +
Sbjct: 341 NRGLSKISLGLYEEAIKDYDKAIKLEANDAFAYCNRGFAKSHL-GLHEEALKDYDKAIKL 399

Query: 310 DKSCMFAYETLGTIEVQRGRLEEAVKCFNKAL 341
           D +  +AY   G  +   G  +E+VK +  AL
Sbjct: 400 DINYAYAYVYRGDTKYNLGLFKESVKDYETAL 431



 Score = 63.5 bits (153), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 89/358 (24%), Positives = 149/358 (41%), Gaps = 56/358 (15%)

Query: 174 YYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQRHFVVHKMIVPGDRERVEQSLKE 233
           Y  +G      G+Y EA++  D+ I LNPN   A   +     K+ +      ++++++E
Sbjct: 101 YNSKGIYKSANGEYAEAIKYYDEAIKLNPNMADAYYNKAIAKTKLGL------LKEAIEE 154

Query: 234 FRNFVDTHSNVVEACTLFAQVLVDQEDFDGAEEYFNRSIRVDPENASLYVHRAMLMLQAR 293
           +   ++  ++   A                   Y+NR                 L+    
Sbjct: 155 YDKAIELRADYTYA-------------------YYNRG----------------LLKSDL 179

Query: 294 GNVDEAIKLIEKAISIDKSCMFAYETLGTIEVQRGRLEEAVKCFNKALPLARDEAELSHI 353
           G ++EAIK  +KA+SID +   AY   G +E + G  +EA+K FNKA+ L  + A     
Sbjct: 180 GLLEEAIKDFDKALSIDPNLFDAYNNKGLLEDELGFSKEAIKDFNKAIKLNPNYA---LA 236

Query: 354 YSLRDAAIAQMKVCER----YNIKKKVSPR---SQNITKNEKLAIKQLRENNDIIIRPAD 406
           Y+ R  A   + + E     Y+   K++P    + N   N K  +    E     I   D
Sbjct: 237 YNNRGNAKDNLGLYEEAIKDYDKAIKLNPNYAFAYNNRGNAKDNLGLYEE----AIEDFD 292

Query: 407 KGGKTVVMDKADYTQKMTSILNSNDYEIIPGDPTKTIEESEKYGNLENESG-QKHAASDF 465
           K  +        Y  +  +  +   YE    D  K I+ +  Y +  +  G  K +   +
Sbjct: 293 KAIELNPNYTDAYNNRGNAKYDLGLYEEAIKDYDKAIKLNPNYTDAYDNRGLSKISLGLY 352

Query: 466 TKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQR 523
            +A  D D+A K++ N A +Y  RG      G +EEAL++ DK I L+ N+  A   R
Sbjct: 353 EEAIKDYDKAIKLEANDAFAYCNRGFAKSHLGLHEEALKDYDKAIKLDINYAYAYVYR 410



 Score = 63.5 bits (153), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 89/390 (22%), Positives = 156/390 (40%), Gaps = 70/390 (17%)

Query: 145 VHLHAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNF 204
           ++  A  ++ +A    DEA K++PN+AD+YY +       G  +EA+   DK I L  ++
Sbjct: 106 IYKSANGEYAEAIKYYDEAIKLNPNMADAYYNKAIAKTKLGLLKEAIEEYDKAIELRADY 165

Query: 205 HVARAQRHFVVHKMIVPGDRERVEQSLKEFRNFVDTHSNVVEACTLFAQVLVDQEDFDGA 264
             A   R       ++  D   +E+++K+F                              
Sbjct: 166 TYAYYNRG------LLKSDLGLLEEAIKDF------------------------------ 189

Query: 265 EEYFNRSIRVDPENASLYVHRAMLMLQARGNVDEAIKLIEKAISIDKSCMFAYETLGTIE 324
               ++++ +DP     Y ++ +L     G   EAIK   KAI ++ +   AY   G  +
Sbjct: 190 ----DKALSIDPNLFDAYNNKGLLE-DELGFSKEAIKDFNKAIKLNPNYALAYNNRGNAK 244

Query: 325 VQRGRLEEAVKCFNKALPLARDEAELSHIYSLRDAAIAQMKVCER----YNIKKKVSPR- 379
              G  EEA+K ++KA+ L  + A     Y+ R  A   + + E     ++   +++P  
Sbjct: 245 DNLGLYEEAIKDYDKAIKLNPNYA---FAYNNRGNAKDNLGLYEEAIEDFDKAIELNPNY 301

Query: 380 --SQNITKNEKLAIKQLRENNDIIIRPADKGGKTVVMDKADYTQKMTSILNSNDYEIIPG 437
             + N   N K  +    E     I+  DK  K        Y  +  S ++   YE    
Sbjct: 302 TDAYNNRGNAKYDLGLYEE----AIKDYDKAIKLNPNYTDAYDNRGLSKISLGLYEEAIK 357

Query: 438 DPTKTIEESEKYGNLENESGQKHAASDFTK--------AFADLDEAEKVDPNVADSYYQR 489
           D  K I+       LE      +    F K        A  D D+A K+D N A +Y  R
Sbjct: 358 DYDKAIK-------LEANDAFAYCNRGFAKSHLGLHEEALKDYDKAIKLDINYAYAYVYR 410

Query: 490 GQIYCLFGQYEEALRNLDKTIALNPNFHVA 519
           G      G ++E++++ +  + ++PN   A
Sbjct: 411 GDTKYNLGLFKESVKDYETALLIDPNNETA 440


>gi|334117761|ref|ZP_08491852.1| Tetratricopeptide TPR_1 repeat-containing protein [Microcoleus
           vaginatus FGP-2]
 gi|333460870|gb|EGK89478.1| Tetratricopeptide TPR_1 repeat-containing protein [Microcoleus
           vaginatus FGP-2]
          Length = 1363

 Score = 80.5 bits (197), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 60/203 (29%), Positives = 102/203 (50%), Gaps = 14/203 (6%)

Query: 167 DPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQRHFVVHKMIVPGDRER 226
           +PN+ + Y   G +Y    Q+ +A+ N +K I+L PNF  A  Q   V  ++      ++
Sbjct: 75  NPNLPEVYANLGILYSQGKQWGKAIANCEKAISLAPNFAAAYRQLARVWTQL-----EKQ 129

Query: 227 VEQSLKEFRNF-VDTHSNVVEACTLFAQVLVDQEDFDGAEEYFNRSIRVDPENASLYVHR 285
            E +   ++ F +D +    E        LV+   FD A E ++R+I+++P  A  Y H 
Sbjct: 130 EEAADCWYQAFNIDPNWATAEEHVTLGNSLVELGKFDRAIECYSRAIKLNPTLAKAY-HN 188

Query: 286 AMLMLQARGNVDEAIKLIEKAISIDKSCMFAYETLGTIEVQRGRLEEAVKCFNKALPL-- 343
              ML  +   DEAI    +AI+I+ +   +Y +LG    +RG  + A+ C+NK+L L  
Sbjct: 189 LGEMLIGQKRWDEAIANYRQAIAINPNSFESYHSLGKTWAERGEFDRAIACYNKSLELNP 248

Query: 344 --ARDEAELSHIYSLR---DAAI 361
             AR    L ++++ +   DAAI
Sbjct: 249 NYARAYVGLGNVFAQKRDFDAAI 271



 Score = 63.9 bits (154), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 64/269 (23%), Positives = 112/269 (41%), Gaps = 57/269 (21%)

Query: 80  AIRHCTEEIESTSSNHTKALARLLRATVYIFTSQSTKAIEDLTQLVEDTSVDPKIKV--- 136
           AI +C + I S + N   A  +L R       +Q  K  E      +  ++DP       
Sbjct: 98  AIANCEKAI-SLAPNFAAAYRQLARVW-----TQLEKQEEAADCWYQAFNIDPNWATAEE 151

Query: 137 NAHIKRAVVHLHAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQ--YEEALRNL 194
           +  +  ++V L     F +A      A K++P +A +Y+  G++  L GQ  ++EA+ N 
Sbjct: 152 HVTLGNSLVEL---GKFDRAIECYSRAIKLNPTLAKAYHNLGEM--LIGQKRWDEAIANY 206

Query: 195 DKTIALNPNFHVARAQRHFVVHKMIVPGDRERVEQSLKEFRNFVDTHSNVVEACTLFAQV 254
            + IA+NPN                                +F   HS          + 
Sbjct: 207 RQAIAINPN--------------------------------SFESYHS--------LGKT 226

Query: 255 LVDQEDFDGAEEYFNRSIRVDPENASLYVHRAMLMLQARGNVDEAIKLIEKAISIDKSCM 314
             ++ +FD A   +N+S+ ++P  A  YV    +  Q R + D AIK   + + I+ +  
Sbjct: 227 WAERGEFDRAIACYNKSLELNPNYARAYVGLGNVFAQKR-DFDAAIKCYRQTLEINDNSY 285

Query: 315 FAYETLGTIEVQRGRLEEAVKCFNKALPL 343
           +AY  LG    Q+   +EA+ C+ KA+ +
Sbjct: 286 WAYNCLGDAFAQKQMWQEAISCYRKAIEI 314



 Score = 62.0 bits (149), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 49/202 (24%), Positives = 96/202 (47%), Gaps = 11/202 (5%)

Query: 147 LHAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHV 206
           L A  ++ +A A   +A +++P+   +Y   G +     ++EEA     K + LNP+F  
Sbjct: 776 LQALEEYDEATAAYRKAIELNPDFCWTYNNLGDVLMELSEWEEAAVAYRKLVELNPDFCW 835

Query: 207 A--RAQRHFVVHKMIVPGDRERVEQSLKEFRNFVDTHSNVVEACTLFAQVLVDQEDFDGA 264
           +  R  + +V          E  E + + +R  ++ + +         +VL  QE++  A
Sbjct: 836 SYERLGKAWVA--------LENWEDATEAYRKAIELNPDDCWLYNSLGEVLEFQENWPEA 887

Query: 265 EEYFNRSIRVDPENASLYVHRAMLMLQARGNVDEAIKLIEKAISIDKSCMFAYETLGTIE 324
              F R+I ++ E++ LY  +    L+ +G ++ AI + EK I++D    + YE LG   
Sbjct: 888 AVAFGRAIELEHEHSWLY-KKLGDALRNQGELERAIAIYEKGINLDPKSCWCYEGLGLSL 946

Query: 325 VQRGRLEEAVKCFNKALPLARD 346
           + + + E A+    +AL +  D
Sbjct: 947 IAKQQWEPAITNLVQALQIKPD 968



 Score = 52.0 bits (123), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 59/277 (21%), Positives = 120/277 (43%), Gaps = 32/277 (11%)

Query: 243 NVVEACTLFAQVLVDQEDFDGAEEYFNRSIRVDPENASLYVHRAMLMLQARGNVDEAIKL 302
           N+  AC    +V+  + + + A++++  +I  +P    +Y +  +L  Q +    +AI  
Sbjct: 43  NLAAACQTLGKVMQVRGEIEQAKQWYEAAIDRNPNLPEVYANLGILYSQGK-QWGKAIAN 101

Query: 303 IEKAISIDKSCMFAYETLGTIEVQRGRLEEAVKCFNKALPLARDEAELSHIYSLRDAAIA 362
            EKAIS+  +   AY  L  +  Q  + EEA  C+ +A  +  + A      +L ++ + 
Sbjct: 102 CEKAISLAPNFAAAYRQLARVWTQLEKQEEAADCWYQAFNIDPNWATAEEHVTLGNSLV- 160

Query: 363 QMKVCERYNIKKKVSPRSQNITKNEKLAIKQLRENNDIIIRPADKGGKTVVMDKADYTQK 422
                E     + +   S+ I  N  LA K      +++I     G K      A+Y Q 
Sbjct: 161 -----ELGKFDRAIECYSRAIKLNPTLA-KAYHNLGEMLI-----GQKRWDEAIANYRQA 209

Query: 423 MTSILNSNDYEIIPGDPTKTIEESEKYGNLENESGQKHAASDFTKAFADLDEAEKVDPNV 482
           +   +N N +E               Y +L     ++    +F +A A  +++ +++PN 
Sbjct: 210 IA--INPNSFE--------------SYHSLGKTWAER---GEFDRAIACYNKSLELNPNY 250

Query: 483 ADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVA 519
           A +Y   G ++     ++ A++   +T+ +N N + A
Sbjct: 251 ARAYVGLGNVFAQKRDFDAAIKCYRQTLEINDNSYWA 287



 Score = 50.1 bits (118), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 42/198 (21%), Positives = 90/198 (45%), Gaps = 11/198 (5%)

Query: 134 IKVNAHIKRAVVHLH----AASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEE 189
           IK+N  + +A  +L         + +A A+  +A  ++PN  +SY+  G+ +   G+++ 
Sbjct: 176 IKLNPTLAKAYHNLGEMLIGQKRWDEAIANYRQAIAINPNSFESYHSLGKTWAERGEFDR 235

Query: 190 ALRNLDKTIALNPNFHVARAQRHFVVHKMIVPGDRERVEQSLKEFRNFVDTHSNVVEACT 249
           A+   +K++ LNPN+  ARA     V    V   +   + ++K +R  ++ + N   A  
Sbjct: 236 AIACYNKSLELNPNY--ARA----YVGLGNVFAQKRDFDAAIKCYRQTLEINDNSYWAYN 289

Query: 250 LFAQVLVDQEDFDGAEEYFNRSIRVDPENASLYVHRAMLMLQARGNVDEAIKLIEKAISI 309
                   ++ +  A   + ++I ++P     YV+   +      + DEA+     A+ I
Sbjct: 290 CLGDAFAQKQMWQEAISCYRKAIEINPNIPWFYVNLG-IAFTCEKSWDEAVAAFLHAVQI 348

Query: 310 DKSCMFAYETLGTIEVQR 327
           + +     + LG +  +R
Sbjct: 349 EPNLTGINQRLGYVLRKR 366



 Score = 42.0 bits (97), Expect = 0.79,   Method: Compositional matrix adjust.
 Identities = 29/96 (30%), Positives = 44/96 (45%), Gaps = 1/96 (1%)

Query: 251 FAQVLVDQEDFDGAEEYFNRSIRVDPENASLYVHRAMLMLQARGNVDEAIKLIEKAISID 310
             + L ++E FD A   + R+I ++P N S   H     LQA    DEA     KAI ++
Sbjct: 738 LGKALQEKELFDEARAAYQRAIELNP-NFSWAYHFLGETLQALEEYDEATAAYRKAIELN 796

Query: 311 KSCMFAYETLGTIEVQRGRLEEAVKCFNKALPLARD 346
               + Y  LG + ++    EEA   + K + L  D
Sbjct: 797 PDFCWTYNNLGDVLMELSEWEEAAVAYRKLVELNPD 832



 Score = 41.2 bits (95), Expect = 1.4,   Method: Compositional matrix adjust.
 Identities = 42/197 (21%), Positives = 81/197 (41%), Gaps = 10/197 (5%)

Query: 153 FTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQRH 212
           + +A +   +A +++PN+   Y   G  +     ++EA+      + + PN      +  
Sbjct: 301 WQEAISCYRKAIEINPNIPWFYVNLGIAFTCEKSWDEAVAAFLHAVQIEPNLTGINQRLG 360

Query: 213 FVVHKMIVPG---------DRERVEQSLKEFRNFVDTHSNVVEACTLFAQVLVDQEDFDG 263
           +V+ K    G             V  S K ++N +    +  E        L  Q+  +G
Sbjct: 361 YVLRKRSESGLDSTIATYCQAIEVLASGKIYQNLLGIELDGAEFYINLGNSLAKQKQLEG 420

Query: 264 AEEYFNRSIRVDPENASLYVHRAMLMLQARGNVDEAIKLIEKAISIDKSCMFAYETLGTI 323
           A  +++ +++++P NA+  V +   +   +  +   I      I I+ +    Y  LG I
Sbjct: 421 AIVFYSMALQIEP-NAAEVVAQLDKVRAKQQELYAQIAAYRHQIEIEPTNSKPYNDLGNI 479

Query: 324 EVQRGRLEEAVKCFNKA 340
             Q G LEEA+ C  KA
Sbjct: 480 LPQLGELEEAIICHQKA 496



 Score = 38.9 bits (89), Expect = 7.1,   Method: Compositional matrix adjust.
 Identities = 34/166 (20%), Positives = 75/166 (45%), Gaps = 11/166 (6%)

Query: 187 YEEALRNLDKTIALNPNFHVARAQRHFVVHKMIVPGDRERVEQSLKEFRNFVDTHSNVVE 246
           ++EA     + I LNPNF  A    HF+   +      E  +++   +R  ++ + +   
Sbjct: 748 FDEARAAYQRAIELNPNFSWAY---HFLGETLQA---LEEYDEATAAYRKAIELNPDFCW 801

Query: 247 ACTLFAQVLVDQEDFDGAEEYFNRSIRVDPENASLY--VHRAMLMLQARGNVDEAIKLIE 304
                  VL++  +++ A   + + + ++P+    Y  + +A + L+   N ++A +   
Sbjct: 802 TYNNLGDVLMELSEWEEAAVAYRKLVELNPDFCWSYERLGKAWVALE---NWEDATEAYR 858

Query: 305 KAISIDKSCMFAYETLGTIEVQRGRLEEAVKCFNKALPLARDEAEL 350
           KAI ++    + Y +LG +   +    EA   F +A+ L  + + L
Sbjct: 859 KAIELNPDDCWLYNSLGEVLEFQENWPEAAVAFGRAIELEHEHSWL 904


>gi|429123527|ref|ZP_19184060.1| hypothetical protein A966_04466 [Brachyspira hampsonii 30446]
 gi|426280600|gb|EKV57611.1| hypothetical protein A966_04466 [Brachyspira hampsonii 30446]
          Length = 352

 Score = 80.5 bits (197), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 63/218 (28%), Positives = 109/218 (50%), Gaps = 33/218 (15%)

Query: 145 VHLHAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNF 204
           +H  A  ++ +A    DEA K++PN+AD+YY +G      G  +EA+   DK I L P++
Sbjct: 106 IHKSANGEYAEAIKYYDEAIKLNPNMADAYYNKGISKAKLGLLKEAIEEYDKAIKLKPDY 165

Query: 205 HVARAQRHFVVHKMIVPGDRERVEQSLKEFR-------NFVDTHSN--VVE-ACTLFAQV 254
             A   R       ++  D   +E+++K+F        N  D ++N  V+E    LF + 
Sbjct: 166 ADAYYNRG------LIKSDLGFLEEAIKDFDKALSIDPNLFDAYNNKGVLENELGLFKEA 219

Query: 255 LVDQEDFDGAEEYFNRSIRVDPENASLYVHRAMLMLQARGNV---DEAIKLIEKAISIDK 311
           + D          FN++I++  ++A +Y +R      ++ N+   +E+IK  +KAI ++ 
Sbjct: 220 IKD----------FNKAIKIADDDAVIYNNRG----NSKYNLELYEESIKDYDKAIKLNP 265

Query: 312 SCMFAYETLGTIEVQRGRLEEAVKCFNKALPLARDEAE 349
               AY   G  +   G  EEA+K F+KA+ L  D A+
Sbjct: 266 YYASAYNNRGNAKDSLGLYEEAIKDFDKAIELKPDYAD 303



 Score = 63.5 bits (153), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 70/264 (26%), Positives = 118/264 (44%), Gaps = 36/264 (13%)

Query: 264 AEEYFNRSIRVDPENASLYVHRAMLMLQARGNVDEAIKLIEKAISIDKSCMFAYETLGTI 323
           A +Y++ +I+++P  A  Y ++ +   +  G + EAI+  +KAI +      AY   G I
Sbjct: 117 AIKYYDEAIKLNPNMADAYYNKGISKAKL-GLLKEAIEEYDKAIKLKPDYADAYYNRGLI 175

Query: 324 EVQRGRLEEAVKCFNKALPLARDEAELSHIYSLRDAAIAQMKVCERYNIKKKVSPRSQNI 383
           +   G LEEA+K F+KAL +           +L DA          YN        ++ +
Sbjct: 176 KSDLGFLEEAIKDFDKALSIDP---------NLFDA----------YN--------NKGV 208

Query: 384 TKNEKLAIKQLRENNDIIIRPADKGGKTVVMDKADYTQKMTSILNSNDYEIIPGDPTKTI 443
            +NE    K+        I+  +K  K    D   Y  +  S  N   YE    D  K I
Sbjct: 209 LENELGLFKE-------AIKDFNKAIKIADDDAVIYNNRGNSKYNLELYEESIKDYDKAI 261

Query: 444 EESEKYGNLENESGQ-KHAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEA 502
           + +  Y +  N  G  K +   + +A  D D+A ++ P+ AD+Y  RG      G Y++A
Sbjct: 262 KLNPYYASAYNNRGNAKDSLGLYEEAIKDFDKAIELKPDYADAYNNRGYSKENLGLYKDA 321

Query: 503 LRNLDKTIALNPNFHVARAQRHFV 526
           L++  K + L+PN   A+    ++
Sbjct: 322 LKDYKKALKLDPNNEYAKENIKYL 345



 Score = 47.0 bits (110), Expect = 0.029,   Method: Compositional matrix adjust.
 Identities = 33/116 (28%), Positives = 56/116 (48%), Gaps = 7/116 (6%)

Query: 412 VVMDKADYTQKMTSILNSNDYEIIPGDPTKTIEESEKYGNLENESG-QKHAASDFTKAFA 470
           ++ DK  +    T+I ++N  + +  D    + +   Y    N  G  K A  ++ +A  
Sbjct: 66  IISDKTYFIGSFTNIADNN--KKVDIDSLNNLTDYHDY----NSKGIHKSANGEYAEAIK 119

Query: 471 DLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQRHFV 526
             DEA K++PN+AD+YY +G      G  +EA+   DK I L P++  A   R  +
Sbjct: 120 YYDEAIKLNPNMADAYYNKGISKAKLGLLKEAIEEYDKAIKLKPDYADAYYNRGLI 175


>gi|333987252|ref|YP_004519859.1| hypothetical protein MSWAN_1037 [Methanobacterium sp. SWAN-1]
 gi|333825396|gb|AEG18058.1| Tetratricopeptide TPR_2 repeat-containing protein [Methanobacterium
           sp. SWAN-1]
          Length = 369

 Score = 80.5 bits (197), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 68/271 (25%), Positives = 126/271 (46%), Gaps = 20/271 (7%)

Query: 130 VDPKIKVNAHIKR-AVVHLHAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYE 188
           +DP   +  ++K  A+V L    +  K    LDE  K+DP ++  +Y +G I    G+Y 
Sbjct: 44  LDPDYALAWNLKGGALVGLGKLDEGIKC---LDEGIKLDPTLSSLWYSKGVISQELGKYA 100

Query: 189 EALRNLDKTIALNPNFHVARAQRHFVVHKMIVPGDRERVEQSLKEFRNFVDTHSNVVEAC 248
           EA+   DK I L                K  V  +  R   S++ F   +  + N V+A 
Sbjct: 101 EAVGYYDKAIEL------GFISSDIFYRKGTVLTELGRYGMSMEPFDKALKINPNFVDAW 154

Query: 249 TLFAQVLVDQEDFDGAEEYFNRSIRVDPENASLYVHRAMLMLQARGNVDEAIKLIEKAIS 308
              A V +    ++ A EY++ +++VDP+N   ++ + M  +       E+++ ++K + 
Sbjct: 155 NDRAMVSLRLNRYEEALEYYDNALKVDPQNVEAFMGKYMAFM-GLDKYPESLEYLDKVLE 213

Query: 309 IDKSCMFAYETLGTIEVQRGRLEEAVKCFNKALPLARDEAELSHIYSLRDAAIAQMKVCE 368
           I+      + + G +  Q GR EEA++C NK L L   E      +  +  ++ ++K  E
Sbjct: 214 IESQHTSLWASRGILLNQLGRYEEALRCSNKVLKLDPKEP---RAWKTKGKSLVELKRPE 270

Query: 369 RYNIKK-----KVSPRSQNITKNEKLAIKQL 394
              +K      K+ P+S ++  N+ +A+ QL
Sbjct: 271 E-ALKSLEEALKLDPKSSDVWFNKGIALSQL 300



 Score = 73.9 bits (180), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 73/314 (23%), Positives = 147/314 (46%), Gaps = 20/314 (6%)

Query: 98  ALARLLRATVYIFTSQSTKAIEDLTQLVEDTSVDPKIKVNAHIKRAVVHLHAASDFTKAF 157
           ALA  L+    +   +  + I+ L    E   +DP +    + K  +        + +A 
Sbjct: 49  ALAWNLKGGALVGLGKLDEGIKCLD---EGIKLDPTLSSLWYSKGVISQ--ELGKYAEAV 103

Query: 158 ADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQRHFVVHK 217
              D+A ++    +D +Y++G +    G+Y  ++   DK + +NPNF  A   R  V  +
Sbjct: 104 GYYDKAIELGFISSDIFYRKGTVLTELGRYGMSMEPFDKALKINPNFVDAWNDRAMVSLR 163

Query: 218 MIVPGDRERVEQSLKEFRNFVDTHSNVVEACTLFAQVLVDQEDFDGAEEYFNRSIRVDPE 277
           +       R E++L+ + N +      VEA        +  + +  + EY ++ + ++ +
Sbjct: 164 L------NRYEEALEYYDNALKVDPQNVEAFMGKYMAFMGLDKYPESLEYLDKVLEIESQ 217

Query: 278 NASLYVHRAMLMLQARGNVDEAIKLIEKAISIDKSCMFAYETLGTIEVQRGRLEEAVKCF 337
           + SL+  R +L+ Q  G  +EA++   K + +D     A++T G   V+  R EEA+K  
Sbjct: 218 HTSLWASRGILLNQL-GRYEEALRCSNKVLKLDPKEPRAWKTKGKSLVELKRPEEALKSL 276

Query: 338 NKALPLARDEAELSHIYSLRDAAIAQM-KVCERYNIKKK---VSPRSQNITKNEKLAIKQ 393
            +AL L   + + S ++  +  A++Q+ K  E  N  +K   ++P +      + L++++
Sbjct: 277 EEALKL---DPKSSDVWFNKGIALSQLEKFKESLNCFEKALNLNPNNVQACTAKGLSLEK 333

Query: 394 LRENNDIIIRPADK 407
           L EN +  +R  DK
Sbjct: 334 L-ENPEEALRSYDK 346



 Score = 48.9 bits (115), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 45/211 (21%), Positives = 99/211 (46%), Gaps = 8/211 (3%)

Query: 136 VNAHIKRAVVHLHAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLD 195
           V+A   RA+V L   + + +A    D A KVDP   +++  +   +    +Y E+L  LD
Sbjct: 151 VDAWNDRAMVSLRL-NRYEEALEYYDNALKVDPQNVEAFMGKYMAFMGLDKYPESLEYLD 209

Query: 196 KTIALNPNFHVARAQRHFVVHKMIVPGDRERVEQSLKEFRNFVDTHSNVVEACTLFAQVL 255
           K + +        A R  +++++       R E++L+     +        A     + L
Sbjct: 210 KVLEIESQHTSLWASRGILLNQL------GRYEEALRCSNKVLKLDPKEPRAWKTKGKSL 263

Query: 256 VDQEDFDGAEEYFNRSIRVDPENASLYVHRAMLMLQARGNVDEAIKLIEKAISIDKSCMF 315
           V+ +  + A +    ++++DP+++ ++ ++ + + Q      E++   EKA++++ + + 
Sbjct: 264 VELKRPEEALKSLEEALKLDPKSSDVWFNKGIALSQLE-KFKESLNCFEKALNLNPNNVQ 322

Query: 316 AYETLGTIEVQRGRLEEAVKCFNKALPLARD 346
           A    G    +    EEA++ ++KAL L  D
Sbjct: 323 ACTAKGLSLEKLENPEEALRSYDKALKLKMD 353


>gi|225620560|ref|YP_002721817.1| TPR domain-containing protein [Brachyspira hyodysenteriae WA1]
 gi|225215379|gb|ACN84113.1| TPR domain-containing protein [Brachyspira hyodysenteriae WA1]
          Length = 257

 Score = 80.1 bits (196), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 67/237 (28%), Positives = 115/237 (48%), Gaps = 32/237 (13%)

Query: 117 AIEDLTQLVEDTSVDPKIKVNAHIKRAVVHLHAASDFTKAFADLDEAEKVDPNVADSYYQ 176
           AIE   +++E   + P    NA+  R V   +    + +A  D D+A +++PN  D Y  
Sbjct: 22  AIESFDKVIE---LAPN-NSNAYYNRGVSKENLGQ-YKEAIKDYDKAIELNPNDIDFYND 76

Query: 177 RGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQRHFVVHKMIVPGDRERVEQSLKEF-- 234
           RG      GQYEEA+++ DK I LNPN   +   R       I   +  + E+S+K++  
Sbjct: 77  RGIAKYNLGQYEEAIKDYDKAIELNPNDSDSYNNRG------IAKKNLGQYEESIKDYDK 130

Query: 235 -----RNFVDTHSNVVEACTLFAQVLVDQEDFDGAEEYFNRSIRVDPENASLYVHRAMLM 289
                 N+ + ++N   A     Q     +D+D       ++I +DP +++ Y +R +  
Sbjct: 131 AIELNHNYSNAYNNRGIAKKYLGQYEEAIKDYD-------KTIELDPNDSNAYNNRGL-- 181

Query: 290 LQARGNVD---EAIKLIEKAISIDKSCMFAYETLGTIEVQRGRLEEAVKCFNKALPL 343
             A+GN+    EAIK  +K+I ++ S    Y   G  +   G+ ++A+K + KAL L
Sbjct: 182 --AKGNLGQYKEAIKDFDKSIELNPSYSDVYNNRGVSKENLGQYKDALKDYKKALKL 236



 Score = 60.5 bits (145), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 58/220 (26%), Positives = 93/220 (42%), Gaps = 35/220 (15%)

Query: 298 EAIKLIEKAISIDKSCMFAYETLGTIEVQRGRLEEAVKCFNKALPLARDEAELSHIYSLR 357
           EAI+  +K I +  +   AY   G  +   G+ +EA+K ++KA+ L  ++ +        
Sbjct: 21  EAIESFDKVIELAPNNSNAYYNRGVSKENLGQYKEAIKDYDKAIELNPNDIDF-----YN 75

Query: 358 DAAIAQMKVCERYNIKKKVSPRSQNITKNEKLAIKQLRENNDIIIRPADKGGKTVVMDKA 417
           D  IA                         K  + Q  E     I+  DK  +    D  
Sbjct: 76  DRGIA-------------------------KYNLGQYEE----AIKDYDKAIELNPNDSD 106

Query: 418 DYTQKMTSILNSNDYEIIPGDPTKTIEESEKYGNLENESG-QKHAASDFTKAFADLDEAE 476
            Y  +  +  N   YE    D  K IE +  Y N  N  G  K     + +A  D D+  
Sbjct: 107 SYNNRGIAKKNLGQYEESIKDYDKAIELNHNYSNAYNNRGIAKKYLGQYEEAIKDYDKTI 166

Query: 477 KVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNF 516
           ++DPN +++Y  RG      GQY+EA+++ DK+I LNP++
Sbjct: 167 ELDPNDSNAYNNRGLAKGNLGQYKEAIKDFDKSIELNPSY 206



 Score = 54.7 bits (130), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 42/195 (21%), Positives = 94/195 (48%), Gaps = 7/195 (3%)

Query: 171 ADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQRHFVVHKMIVPGDRERVEQS 230
           ++ YY+ G  Y    +Y+EA+ + DK I L PN   A   R      +       + +++
Sbjct: 3   SEQYYEEGLNYFKERKYKEAIESFDKVIELAPNNSNAYYNRGVSKENL------GQYKEA 56

Query: 231 LKEFRNFVDTHSNVVEACTLFAQVLVDQEDFDGAEEYFNRSIRVDPENASLYVHRAMLML 290
           +K++   ++ + N ++          +   ++ A + ++++I ++P ++  Y +R +   
Sbjct: 57  IKDYDKAIELNPNDIDFYNDRGIAKYNLGQYEEAIKDYDKAIELNPNDSDSYNNRGIAK- 115

Query: 291 QARGNVDEAIKLIEKAISIDKSCMFAYETLGTIEVQRGRLEEAVKCFNKALPLARDEAEL 350
           +  G  +E+IK  +KAI ++ +   AY   G  +   G+ EEA+K ++K + L  +++  
Sbjct: 116 KNLGQYEESIKDYDKAIELNHNYSNAYNNRGIAKKYLGQYEEAIKDYDKTIELDPNDSNA 175

Query: 351 SHIYSLRDAAIAQMK 365
            +   L    + Q K
Sbjct: 176 YNNRGLAKGNLGQYK 190



 Score = 52.4 bits (124), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 58/248 (23%), Positives = 110/248 (44%), Gaps = 36/248 (14%)

Query: 266 EYFNRSIRVDPENASLYVHRAMLMLQARGNVDEAIKLIEKAISIDKSCMFAYETLGTIEV 325
           E F++ I + P N++ Y +R +   +  G   EAIK  +KAI ++ + +  Y   G  + 
Sbjct: 24  ESFDKVIELAPNNSNAYYNRGVSK-ENLGQYKEAIKDYDKAIELNPNDIDFYNDRGIAKY 82

Query: 326 QRGRLEEAVKCFNKALPLARDEAELSHIYSLRDAAIAQMK-VCERYNIKKKVSPRSQNIT 384
             G+ EEA+K ++KA+ L  ++++  +   +    + Q +   + Y+   +++    N  
Sbjct: 83  NLGQYEEAIKDYDKAIELNPNDSDSYNNRGIAKKNLGQYEESIKDYDKAIELNHNYSNAY 142

Query: 385 KNEKLAIKQLRENNDIIIRPADKGGKTVVMDKADYTQKMTSILNSNDYEIIPGDPTKTIE 444
            N  +A K L +  + I                DY + +         E+ P D      
Sbjct: 143 NNRGIAKKYLGQYEEAI---------------KDYDKTI---------ELDPNDSNAYNN 178

Query: 445 ESEKYGNLENESGQKHAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALR 504
                GNL    GQ      + +A  D D++ +++P+ +D Y  RG      GQY++AL+
Sbjct: 179 RGLAKGNL----GQ------YKEAIKDFDKSIELNPSYSDVYNNRGVSKENLGQYKDALK 228

Query: 505 NLDKTIAL 512
           +  K + L
Sbjct: 229 DYKKALKL 236



 Score = 48.5 bits (114), Expect = 0.009,   Method: Compositional matrix adjust.
 Identities = 25/65 (38%), Positives = 38/65 (58%)

Query: 459 KHAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHV 518
           K+    + +A  D D+A +++PN +DSY  RG      GQYEE++++ DK I LN N+  
Sbjct: 81  KYNLGQYEEAIKDYDKAIELNPNDSDSYNNRGIAKKNLGQYEESIKDYDKAIELNHNYSN 140

Query: 519 ARAQR 523
           A   R
Sbjct: 141 AYNNR 145


>gi|291569640|dbj|BAI91912.1| serine/threonine protein kinase containing TPR domain [Arthrospira
           platensis NIES-39]
          Length = 732

 Score = 80.1 bits (196), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 94/414 (22%), Positives = 159/414 (38%), Gaps = 53/414 (12%)

Query: 131 DPKIKVNAHIKRAVVHLHAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEA 190
           DP +K  A +KR V  L A  D   A    + + ++ P+ ++++ +R   Y    +YE+A
Sbjct: 339 DP-VKSEAALKRGVERLEAG-DPEAAIKAFNRSIQLFPDNSEAFRKRANAYYDLQKYEQA 396

Query: 191 LRNLDKTIALNPNFHVARAQRHFVVHKMIVPGDRERVEQSLKEFRNFVDTHSNVVEACTL 250
           + +  + I L+P        R    H+M   GD      ++ +    +  +    +A   
Sbjct: 397 IADYTQAIKLDPTNPDIYFNRSLAYHQM---GD---FGNAINDLNQVIRLNPEDTDAFYQ 450

Query: 251 FAQVLVDQEDFDGAEEYFNRSIRVDPENASLYVHRAMLMLQARGNVDEAIKLIEKAISID 310
                  QE+++ A   +   IR  P+++  Y  R    ++A GN+   +    +AI ++
Sbjct: 451 RGLAHYTQENYEAAILDYTEVIRRQPDHSEAYRARGSAHVKA-GNLQAGMADYTEAIRLN 509

Query: 311 KSCMFAYETLGTIEVQRGRLEEAVKCFNKALPLARDEAELSHIYSLRDAAIAQMKVCERY 370
                AY   G      G  + A+  +N+ +    D AE            A    C  Y
Sbjct: 510 PQSAAAYYNRGRARFHLGDYQGALADYNQVISWEPDNAE------------AYGNRCSTY 557

Query: 371 ----NIKKKVSPRSQNITKNEKLAIKQLRENNDIIIRPADKGGKTVVMDKADYTQKMTSI 426
               N +  +   S++I  N                               DY  +  + 
Sbjct: 558 INLGNYEAAIESCSRSIQLNPT---------------------------AMDYNNRCIAY 590

Query: 427 LNSNDYEIIPGDPTKTIEESEKYGNLENESGQKHA-ASDFTKAFADLDEAEKVDPNVADS 485
           LN  +Y+   GD TK IE         +  G  H+ A D+  A AD  +A  ++PN A+S
Sbjct: 591 LNVQNYDAAIGDCTKAIELEPNNSKAHSNRGLVHSLAEDYEAAIADYSQAISLNPNDAES 650

Query: 486 YYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQRHFVWTSTLAELMAFSD 539
           Y  R Q +   G Y +A+ +  + I + PN   A   R  V  S      A SD
Sbjct: 651 YSNRAQAHAELGNYSQAIADYAQAIRIRPNLAGAFYGRGMVRASLGDRRGAISD 704



 Score = 69.3 bits (168), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 91/406 (22%), Positives = 161/406 (39%), Gaps = 63/406 (15%)

Query: 114 STKAIEDLTQLVEDTSVDPKIKVNAHIKRAVVHLHAASDFTKAFADLDEAEKVDPNVADS 173
           + KA     QL  D S   + + NA+        +    + +A AD  +A K+DP   D 
Sbjct: 362 AIKAFNRSIQLFPDNSEAFRKRANAY--------YDLQKYEQAIADYTQAIKLDPTNPDI 413

Query: 174 YYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQRHFVVHKMIVPGDRERVEQSLKE 233
           Y+ R   Y   G +  A+ +L++ I LNP    A  QR    +       +E  E ++ +
Sbjct: 414 YFNRSLAYHQMGDFGNAINDLNQVIRLNPEDTDAFYQRGLAHYT------QENYEAAILD 467

Query: 234 FRNFVDTHSNVVEACTLFAQVLVDQEDFDGAEEYFNRSIRVDPENASLYVHRAMLMLQAR 293
           +   +    +  EA        V   +       +  +IR++P++A+ Y +R        
Sbjct: 468 YTEVIRRQPDHSEAYRARGSAHVKAGNLQAGMADYTEAIRLNPQSAAAYYNRGRARFHL- 526

Query: 294 GNVDEAIKLIEKAISIDKSCMFAYETLGTIEVQRGRLEEAVKCFNKAL---PLARDEAEL 350
           G+   A+    + IS +     AY    +  +  G  E A++  ++++   P A D    
Sbjct: 527 GDYQGALADYNQVISWEPDNAEAYGNRCSTYINLGNYEAAIESCSRSIQLNPTAMDYNNR 586

Query: 351 SHIY---SLRDAAIAQMKVCERYNIKKKVSPRSQNITKNEKLAIKQLRENNDIIIRPADK 407
              Y      DAAI     C +     ++ P +     N  L +  L E+ +  I     
Sbjct: 587 CIAYLNVQNYDAAIGD---CTK---AIELEPNNSKAHSNRGL-VHSLAEDYEAAI----- 634

Query: 408 GGKTVVMDKADYTQKMTSILNSNDYEIIPGDPTKTIEESEKYGNLENESGQKHA-ASDFT 466
                    ADY+Q ++  LN ND              +E Y N      Q HA   +++
Sbjct: 635 ---------ADYSQAIS--LNPND--------------AESYSN----RAQAHAELGNYS 665

Query: 467 KAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIAL 512
           +A AD  +A ++ PN+A ++Y RG +    G    A+ + ++   L
Sbjct: 666 QAIADYAQAIRIRPNLAGAFYGRGMVRASLGDRRGAISDFEQAGKL 711



 Score = 55.8 bits (133), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 44/149 (29%), Positives = 67/149 (44%), Gaps = 12/149 (8%)

Query: 76  DYLTAIRHCTEEIESTSSNHTKALARLLRATVYIFTSQSTKAIEDLTQLVEDTSVDPKIK 135
           +Y  AI  C+  I+   +    A+    R   Y+       AI D T+ +E   ++P   
Sbjct: 562 NYEAAIESCSRSIQLNPT----AMDYNNRCIAYLNVQNYDAAIGDCTKAIE---LEPN-N 613

Query: 136 VNAHIKRAVVHLHAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLD 195
             AH  R +VH   A D+  A AD  +A  ++PN A+SY  R Q +   G Y +A+ +  
Sbjct: 614 SKAHSNRGLVH-SLAEDYEAAIADYSQAISLNPNDAESYSNRAQAHAELGNYSQAIADYA 672

Query: 196 KTIALNPNFHVARAQRHFVVHKMIVPGDR 224
           + I + PN   A   R  V   +   GDR
Sbjct: 673 QAIRIRPNLAGAFYGRGMVRASL---GDR 698


>gi|428319215|ref|YP_007117097.1| glycosyl transferase group 1 [Oscillatoria nigro-viridis PCC 7112]
 gi|428242895|gb|AFZ08681.1| glycosyl transferase group 1 [Oscillatoria nigro-viridis PCC 7112]
          Length = 3281

 Score = 80.1 bits (196), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 57/202 (28%), Positives = 96/202 (47%), Gaps = 7/202 (3%)

Query: 145  VHLHAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNF 204
            V LH   D  +A A    A ++DPN A ++   G +    G   +A+    K IALNP +
Sbjct: 1917 VTLHQTGDLAEAAAYYQRAIEIDPNCAQAHNNLGILLQDRGNIPDAVSCFQKAIALNPIY 1976

Query: 205  HVARAQRHFVVHKMIVPGDRERVEQSLKEFRNFVDTHSNVVEACTLFAQVLVDQEDFDGA 264
              A      ++ +    GD   +  ++  F   +  +SN V A       +  Q   D A
Sbjct: 1977 VKALNNLGTILQQQ---GD---LPTAIACFHQALSVNSNYVPALVNLGVAMQAQSQLDEA 2030

Query: 265  EEYFNRSIRVDPENASLYVHRAMLMLQARGNVDEAIKLIEKAISIDKSCMFAYETLGTIE 324
            +  + R+I  +P + + + H   L L A G +++AI  +E+AIS++ + + A   LG+  
Sbjct: 2031 QRLYERAIEAEPNDPAGHYHLGTLCLGA-GKIEQAISSLERAISLNPNYIEAITNLGSAF 2089

Query: 325  VQRGRLEEAVKCFNKALPLARD 346
             Q G +  A+ C+NKAL +  D
Sbjct: 2090 EQAGDINRAIVCYNKALEIDAD 2111



 Score = 71.6 bits (174), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 40/116 (34%), Positives = 64/116 (55%), Gaps = 1/116 (0%)

Query: 226  RVEQSLKEFRNFVDTHSNVVEACTLFAQVLVDQEDFDGAEEYFNRSIRVDPENASLYVHR 285
            R  +++  F+N +    N +EA T  A  L    D   A  Y+ R+I +DP  A  + + 
Sbjct: 1890 RFSEAIACFKNALVWQPNSIEAATNLAVTLHQTGDLAEAAAYYQRAIEIDPNCAQAHNNL 1949

Query: 286  AMLMLQARGNVDEAIKLIEKAISIDKSCMFAYETLGTIEVQRGRLEEAVKCFNKAL 341
             +L LQ RGN+ +A+   +KAI+++   + A   LGTI  Q+G L  A+ CF++AL
Sbjct: 1950 GIL-LQDRGNIPDAVSCFQKAIALNPIYVKALNNLGTILQQQGDLPTAIACFHQAL 2004



 Score = 64.3 bits (155), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 54/237 (22%), Positives = 113/237 (47%), Gaps = 20/237 (8%)

Query: 134  IKVNAHIKRAVVHL----HAASDFTKAFADLDEAEKVDPNVADSYY-------QRGQIYC 182
            + +N +   A+++L        D  +A +  ++A +V+PN A +Y        ++G+   
Sbjct: 1300 LSLNPNCPEALINLGLLREEQGDVAEAISCYEQAIQVNPNCAAAYLNLGIALEEQGEEAA 1359

Query: 183  LFGQYEEALRNLDKTIALNPNFHVARAQRHFVVHKMIVPGDRERVEQSLKEFRNFVDTHS 242
                YE A+ N ++ IA+ PN+  A    H + +  I  G   RV  ++  +   +    
Sbjct: 1360 AGANYERAIANYERAIAIEPNYLDAL---HNLAYASIRQG---RVADAIAYYDRALALQP 1413

Query: 243  NVVEACTLFAQVLVDQEDFDGAEEYFNRSIRVDPENASLYVHRAMLMLQARGNVDEAIKL 302
            ++ E        L +Q+  D A  +  ++I+  P +A  + +   ++LQ +G +++AI  
Sbjct: 1414 DLAETDLALGSWLSNQDKLDEALAFCQQAIQKLPASAQAHCNLG-IVLQKQGKIEDAIGC 1472

Query: 303  IEKAISIDKSCMFAYETLGTIEVQRGRLEEAVKCFNKALPLARDEAELSHIYSLRDA 359
             ++A+S+      A   LG    + G++ EA+ C+++A+ L      ++ +YSL  A
Sbjct: 1473 YQQALSLKPDFPQALNNLGQAFEEAGKMAEAIDCYHRAIEL--KPGYINPLYSLASA 1527



 Score = 60.8 bits (146), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 50/214 (23%), Positives = 99/214 (46%), Gaps = 12/214 (5%)

Query: 142  RAVVHLHAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALN 201
            R  V L   +DF  A    + A  +DPN A ++   G +    GQ  EA+ +  + +A++
Sbjct: 1210 RLGVDLQQQADFGAAIECYERAIAIDPNYAAAHSNLGVVKQQSGQLTEAIAHYRQALAID 1269

Query: 202  PNFHVARAQRHFVVHKMIVPGDRERVEQSLKEFRNFVDTHSNVVEACTLFAQVLVDQEDF 261
             N     +     +       +    E+++ E+   +  + N  EA      +  +Q D 
Sbjct: 1270 RNLAETASNLGSAL------AEAGETEEAIAEYERALSLNPNCPEALINLGLLREEQGDV 1323

Query: 262  DGAEEYFNRSIRVDPENASLYVHRAMLMLQ------ARGNVDEAIKLIEKAISIDKSCMF 315
              A   + ++I+V+P  A+ Y++  + + +      A  N + AI   E+AI+I+ + + 
Sbjct: 1324 AEAISCYEQAIQVNPNCAAAYLNLGIALEEQGEEAAAGANYERAIANYERAIAIEPNYLD 1383

Query: 316  AYETLGTIEVQRGRLEEAVKCFNKALPLARDEAE 349
            A   L    +++GR+ +A+  +++AL L  D AE
Sbjct: 1384 ALHNLAYASIRQGRVADAIAYYDRALALQPDLAE 1417



 Score = 56.2 bits (134), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 41/165 (24%), Positives = 80/165 (48%), Gaps = 7/165 (4%)

Query: 185 GQYEEALRNLDKTIALNPNFHVARAQRHFVVHKMIVPGDRERVEQSLKEFRNFVDTHSNV 244
           G  EEA+   ++ I+L PN   AR    F+        ++  +E ++  +R  +    N+
Sbjct: 690 GDKEEAIALYEQIISLEPNCVQARINFGFLKQ------EKGELEAAIPHYREALAIDPNI 743

Query: 245 VEACTLFAQVLVDQEDFDGAEEYFNRSIRVDPENASLYVHRAMLMLQARGNVDEAIKLIE 304
            +     A++  +Q   + A  ++ +++   P+     ++ A+  LQ +G +  AI L  
Sbjct: 744 PQTAYNLAKIFEEQGQVEAAIAHYEQALVAQPDFVPALINLAV-ALQEKGELLRAIDLYR 802

Query: 305 KAISIDKSCMFAYETLGTIEVQRGRLEEAVKCFNKALPLARDEAE 349
           +A+ I      AY  L T+  ++G LE+A++ ++KAL L  D  E
Sbjct: 803 RALEIHPHSWEAYNNLATVLQEQGNLEDALEYYHKALELLPDFVE 847



 Score = 53.1 bits (126), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 44/207 (21%), Positives = 100/207 (48%), Gaps = 7/207 (3%)

Query: 142 RAVVHLHAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALN 201
           R    L    D  +A A  ++   ++PN   +    G +    G+ E A+ +  + +A++
Sbjct: 681 RQAEQLMETGDKEEAIALYEQIISLEPNCVQARINFGFLKQEKGELEAAIPHYREALAID 740

Query: 202 PNFHVARAQRHFVVHKMIVPGDRERVEQSLKEFRNFVDTHSNVVEACTLFAQVLVDQEDF 261
           PN      Q  + + K+    ++ +VE ++  +   +    + V A    A  L ++ + 
Sbjct: 741 PNI----PQTAYNLAKIF--EEQGQVEAAIAHYEQALVAQPDFVPALINLAVALQEKGEL 794

Query: 262 DGAEEYFNRSIRVDPENASLYVHRAMLMLQARGNVDEAIKLIEKAISIDKSCMFAYETLG 321
             A + + R++ + P +   Y + A  +LQ +GN+++A++   KA+ +    + A   LG
Sbjct: 795 LRAIDLYRRALEIHPHSWEAYNNLAT-VLQEQGNLEDALEYYHKALELLPDFVEAINNLG 853

Query: 322 TIEVQRGRLEEAVKCFNKALPLARDEA 348
              +++G +E+A+ C+ +A+ L+ + A
Sbjct: 854 RTFLEKGAVEDAISCYRRAIHLSPNHA 880



 Score = 52.8 bits (125), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 48/214 (22%), Positives = 88/214 (41%), Gaps = 10/214 (4%)

Query: 136 VNAHIKRAVVHLHAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLD 195
           V AH+ +A + L    ++ +A A  +E  K+ PN   +Y   G      G+ + A+    
Sbjct: 84  VEAHLNKANLLLDVG-EYQRAIASYEEVIKIQPNSVLAYNNLGWAKQQLGEIDAAILYYQ 142

Query: 196 KTIALNPNFH-VARAQRHFVVHKMIVPGDRERVEQSLKEFRNFVDTHSNVVEACTLFAQV 254
             + L+ N H  A    H    K        ++ +++  + + +  + N+  +      V
Sbjct: 143 TALQLDSNLHETAHNLGHLYKQK-------NQLNEAIAYYLHALKVNPNLTYSLMGLGTV 195

Query: 255 LVDQEDFDGAEEYFNRSIRVDPENASLYVHRAMLMLQARGNVDEAIKLIEKAISIDKSCM 314
           L  Q  F  A   + +++++DP N   + +        +GN   AI    +A+ +    +
Sbjct: 196 LQQQGKFAEAFNCYQQAVKLDPNNPEAH-NNVGAFFHEQGNAKVAISHYRQALKLKPDFV 254

Query: 315 FAYETLGTIEVQRGRLEEAVKCFNKALPLARDEA 348
            A   LG   V  G  +EA  C  +AL L  D A
Sbjct: 255 EAINNLGHALVDLGEFQEAFSCHIRALELQPDNA 288



 Score = 51.6 bits (122), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 38/122 (31%), Positives = 59/122 (48%), Gaps = 4/122 (3%)

Query: 224  RERVEQSLKEFRNFVDTHSNVVEACTLF--AQVLVDQEDFDGAEEYFNRSIRVDPENASL 281
            RER+ Q  +E +  ++   NV  A   F    VL  Q  F  A   F  ++   P +   
Sbjct: 1853 RERISQH-QEAQPLIEAQPNVDLAQEQFNCGNVLKAQGRFSEAIACFKNALVWQPNSIEA 1911

Query: 282  YVHRAMLMLQARGNVDEAIKLIEKAISIDKSCMFAYETLGTIEVQRGRLEEAVKCFNKAL 341
              + A+ + Q  G++ EA    ++AI ID +C  A+  LG +   RG + +AV CF KA+
Sbjct: 1912 ATNLAVTLHQT-GDLAEAAAYYQRAIEIDPNCAQAHNNLGILLQDRGNIPDAVSCFQKAI 1970

Query: 342  PL 343
             L
Sbjct: 1971 AL 1972



 Score = 45.1 bits (105), Expect = 0.098,   Method: Compositional matrix adjust.
 Identities = 54/230 (23%), Positives = 100/230 (43%), Gaps = 32/230 (13%)

Query: 290  LQARGNVDEAIKLIEKAISIDKSCMFAYETLGTIEVQRGRLEEAVKCFNKALPLARDEAE 349
            LQ + +   AI+  E+AI+ID +   A+  LG ++ Q G+L EA+  + +AL + R+ AE
Sbjct: 1215 LQQQADFGAAIECYERAIAIDPNYAAAHSNLGVVKQQSGQLTEAIAHYRQALAIDRNLAE 1274

Query: 350  L-SHIYS-LRDAAIAQMKVCERYNIKKKVSPRSQNITKNEKLAIKQLRENNDIIIRPADK 407
              S++ S L +A   +  + E Y     ++P       N  L    LRE           
Sbjct: 1275 TASNLGSALAEAGETEEAIAE-YERALSLNPNCPEALINLGL----LRE----------- 1318

Query: 408  GGKTVVMDKADYTQKMTSILNSNDYE-IIPGDPTKTIEESEKYGNLENESGQKHAASDFT 466
                   ++ D  + ++       YE  I  +P            LE +  +  A +++ 
Sbjct: 1319 -------EQGDVAEAISC------YEQAIQVNPNCAAAYLNLGIALEEQGEEAAAGANYE 1365

Query: 467  KAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNF 516
            +A A+ + A  ++PN  D+ +         G+  +A+   D+ +AL P+ 
Sbjct: 1366 RAIANYERAIAIEPNYLDALHNLAYASIRQGRVADAIAYYDRALALQPDL 1415



 Score = 42.4 bits (98), Expect = 0.56,   Method: Compositional matrix adjust.
 Identities = 40/197 (20%), Positives = 83/197 (42%), Gaps = 14/197 (7%)

Query: 160 LDEAEKVDPNVADSYYQRGQIYCLFG-------QYEEALRNLDKTIALNPNFHVARAQRH 212
           L EAE +   + +   +   + CL G       +  EA+   +K IA N +F     + H
Sbjct: 32  LLEAENLYRQIIEVQPESANVLCLLGIAARQQGKIAEAIDFYEKAIAQNRDF----VEAH 87

Query: 213 FVVHKMIVPGDRERVEQSLKEFRNFVDTHSNVVEACTLFAQVLVDQEDFDGAEEYFNRSI 272
                +++  D    ++++  +   +    N V A            + D A  Y+  ++
Sbjct: 88  LNKANLLL--DVGEYQRAIASYEEVIKIQPNSVLAYNNLGWAKQQLGEIDAAILYYQTAL 145

Query: 273 RVDPENASLYVHRAMLMLQARGNVDEAIKLIEKAISIDKSCMFAYETLGTIEVQRGRLEE 332
           ++D  N     H    + + +  ++EAI     A+ ++ +  ++   LGT+  Q+G+  E
Sbjct: 146 QLD-SNLHETAHNLGHLYKQKNQLNEAIAYYLHALKVNPNLTYSLMGLGTVLQQQGKFAE 204

Query: 333 AVKCFNKALPLARDEAE 349
           A  C+ +A+ L  +  E
Sbjct: 205 AFNCYQQAVKLDPNNPE 221


>gi|354565365|ref|ZP_08984540.1| Tetratricopeptide TPR_1 repeat-containing protein [Fischerella sp.
           JSC-11]
 gi|353549324|gb|EHC18766.1| Tetratricopeptide TPR_1 repeat-containing protein [Fischerella sp.
           JSC-11]
          Length = 373

 Score = 80.1 bits (196), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 57/192 (29%), Positives = 94/192 (48%), Gaps = 9/192 (4%)

Query: 153 FTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQRH 212
           +  A  D D   ++DPN  ++   RG+ Y L  +YEEAL++ ++ IALNPNF  A A R 
Sbjct: 75  YEDALKDFDRVIELDPNFTEALAIRGETYRLMQKYEEALKDFNRAIALNPNFDWALASRG 134

Query: 213 FVVHKMIVPGDRERVEQSLKEFRNFVDTHSNVVEACTLFAQVLVDQEDFDGAEEYFNRSI 272
                M      +R E++LK+F   +  +SN+        Q     + +  A + F+R+I
Sbjct: 135 QTYQLM------QRYEEALKDFNRAIKINSNLDWVLASRGQTYQLMQCYKQALKDFDRAI 188

Query: 273 RVDPENASLYVHRA-MLMLQARGNVDEAIKLIEKAISIDKSCMFAYETLGTIEVQRGRLE 331
           +++P NA     R     L  R    +A+K  + AI  + +  +A  T G + +   R  
Sbjct: 189 KLNPGNAWALAGRGETYRLMQR--YKQALKDFDCAIEFNPNYAWALMTRGEVYLMLKRYN 246

Query: 332 EAVKCFNKALPL 343
            A+  FN+A+ L
Sbjct: 247 AALADFNRAIEL 258



 Score = 67.0 bits (162), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 50/191 (26%), Positives = 92/191 (48%), Gaps = 7/191 (3%)

Query: 151 SDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQ 210
           +++ KA  + D   K++PN   +  +RGQIY    +YE+AL++ D+ I L+PNF  A A 
Sbjct: 39  NNYKKALKEFDRTLKINPNHISTLARRGQIYQFLLRYEDALKDFDRVIELDPNFTEALAI 98

Query: 211 RHFVVHKMIVPGDRERVEQSLKEFRNFVDTHSNVVEACTLFAQVLVDQEDFDGAEEYFNR 270
           R      M      ++ E++LK+F   +  + N   A     Q     + ++ A + FNR
Sbjct: 99  RGETYRLM------QKYEEALKDFNRAIALNPNFDWALASRGQTYQLMQRYEEALKDFNR 152

Query: 271 SIRVDPENASLYVHRAMLMLQARGNVDEAIKLIEKAISIDKSCMFAYETLGTIEVQRGRL 330
           +I+++     +   R     Q      +A+K  ++AI ++    +A    G       R 
Sbjct: 153 AIKINSNLDWVLASRGQ-TYQLMQCYKQALKDFDRAIKLNPGNAWALAGRGETYRLMQRY 211

Query: 331 EEAVKCFNKAL 341
           ++A+K F+ A+
Sbjct: 212 KQALKDFDCAI 222



 Score = 52.8 bits (125), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 25/59 (42%), Positives = 36/59 (61%)

Query: 465 FTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQR 523
           +  A  D D   ++DPN  ++   RG+ Y L  +YEEAL++ ++ IALNPNF  A A R
Sbjct: 75  YEDALKDFDRVIELDPNFTEALAIRGETYRLMQKYEEALKDFNRAIALNPNFDWALASR 133



 Score = 43.1 bits (100), Expect = 0.41,   Method: Compositional matrix adjust.
 Identities = 21/59 (35%), Positives = 33/59 (55%)

Query: 465 FTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQR 523
           + +A  D D A K++P  A +   RG+ Y L  +Y++AL++ D  I  NPN+  A   R
Sbjct: 177 YKQALKDFDRAIKLNPGNAWALAGRGETYRLMQRYKQALKDFDCAIEFNPNYAWALMTR 235



 Score = 40.8 bits (94), Expect = 1.8,   Method: Compositional matrix adjust.
 Identities = 20/59 (33%), Positives = 32/59 (54%)

Query: 465 FTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQR 523
           + +A  D + A  ++PN   +   RGQ Y L  +YEEAL++ ++ I +N N     A R
Sbjct: 109 YEEALKDFNRAIALNPNFDWALASRGQTYQLMQRYEEALKDFNRAIKINSNLDWVLASR 167


>gi|282164220|ref|YP_003356605.1| hypothetical protein MCP_1550 [Methanocella paludicola SANAE]
 gi|282156534|dbj|BAI61622.1| hypothetical protein [Methanocella paludicola SANAE]
          Length = 1006

 Score = 80.1 bits (196), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 87/367 (23%), Positives = 164/367 (44%), Gaps = 46/367 (12%)

Query: 153 FTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQRH 212
             +A  +  EA +  P+ A+++Y     +   G  ++A+R   + + LNP+F    A+ H
Sbjct: 53  LDEAIREYSEAVRQKPDYAEAHYNLAVAFDDKGLLDDAIREFREAVRLNPDF----AEAH 108

Query: 213 FVVHKMIVPGDRERVEQSLKEFRNFVDTHSNVVEACTLFAQVLVDQEDFDGAEEYFNRSI 272
           F +   +   D+  ++ ++ E+R  +    +   A       L  +   D A + F  ++
Sbjct: 109 FNLGAAL--DDKGLLDDAIMEYREALRLSPDFARAHYNMGIALGKRNQLDDAVKEFKDAL 166

Query: 273 RVDPENASLYVHRAM-LMLQARGNVDEAIKLIEKAISIDKSCMFAYETLGTIEVQRGRLE 331
           R+DP+     VH  M ++L  +G +DEAIK   +AI +      A+  LG     +G ++
Sbjct: 167 RIDPDYPE--VHYNMGVVLGKKGMLDEAIKEFREAIRLKADDAEAHYNLGVSLDYKGLVD 224

Query: 332 EAVKCFNKALPLARDEAELSHIYSLRDAAIAQMKVCERYNIKKKVSPRSQNITKNEKLAI 391
           EA++ F +A+ L  D+AE +H                 YN+   +S + Q        AI
Sbjct: 225 EAIREFREAVWLKPDDAE-AH-----------------YNLGLALSKKGQYDQ-----AI 261

Query: 392 KQLRENNDIIIRPADKGGKTVVMDKADYTQKMTSILNS--NDYEIIPGDPTKTIEESEKY 449
           ++ RE   + ++P        +    DY  ++   +        + P DP       E +
Sbjct: 262 REYREA--VRLKPDYAKAHNNLGILLDYRGQLDEAIKEYYAAVRLRPDDP-------EAH 312

Query: 450 GNLENESGQKHAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKT 509
            NL      ++A  +  + F D   A K+ P  A+++Y+ G ++C  G  +EA++ L + 
Sbjct: 313 YNLGVALASRNALDEAAQEFRD---AVKLRPGYAEAHYKLGYVFCRKGMLDEAVKELREA 369

Query: 510 IALNPNF 516
           I L PN+
Sbjct: 370 IWLRPNY 376



 Score = 59.3 bits (142), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 83/392 (21%), Positives = 173/392 (44%), Gaps = 52/392 (13%)

Query: 156 AFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQRHFVV 215
           A  +  EA ++ P++A+++Y    ++   G  +EA+R   + + L P++    A+ H+ +
Sbjct: 498 AIREFREAYRLKPDLAEAFYNLAVVFGKKGLLDEAIREYREAVRLRPDY----AEAHYNL 553

Query: 216 HKMIVPGDRERVEQSLKEFRNFVDTHSNVVEACTLFAQVLVDQEDFDGAEEYFNRSIRVD 275
               +   +  +++S++EFR  V        A       L  +   D A   +   +R+ 
Sbjct: 554 --ATIYSKKNMLDESIREFRESVHLRPEDANAHYYLGLALNKKGLVDNAIREYIEVVRLK 611

Query: 276 PENASLYVHRAMLMLQARGNVDEAIKLIEKAISIDKSCMFAYETLGTIEVQRGRLEEAVK 335
           PE+A  + + A+ +   +G  DE+I+   +AI I      A+  L ++  ++G L+EA+ 
Sbjct: 612 PEDAQAHNNLALALFD-KGMADESIREFREAIRIKPEYAEAHFNLASVLDKKGLLDEAIG 670

Query: 336 CFNKALPLARDEAELSHIYSLRDAAIAQMKVCERYN-IKKKVSPRSQNITKNEKL----- 389
            +  A+   RD+  +SH Y+L  A I +  + E    +++ V  +  +     +L     
Sbjct: 671 EYGIAIEQRRDDP-VSH-YNLALALIRKGMLDEAIKELREVVWLKPDDFEARFRLGMAFN 728

Query: 390 -------AIKQLRENNDIIIRPADKG---------GKTVVMDKADYTQKMTSILNSNDYE 433
                  +I++LRE   + + P D G         GK  ++D+A    +  ++L S    
Sbjct: 729 EKNMLDDSIRELREA--LALEPNDPGVHYNLGVVMGKKGMLDEA--IVEFKAVLESK--- 781

Query: 434 IIPGDPTKTIEESEKYGNLENESGQKHAASDFTKAFADLDEAEKVDPNVADSYYQRGQIY 493
             P D          Y          +    + +A  +L  A ++ P+ A+++Y  G + 
Sbjct: 782 --PEDVNAHYYLGLAY----------NYKCMYDEAVGELLAALRLKPDDANTHYNLGVVM 829

Query: 494 CLFGQYEEALRNLDKTIALNPNFHVARAQRHF 525
              GQ ++A+    + + + P++  ARA  + 
Sbjct: 830 ANRGQLDDAINEYREALRIKPDY--ARAHNNL 859



 Score = 59.3 bits (142), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 62/273 (22%), Positives = 124/273 (45%), Gaps = 15/273 (5%)

Query: 77  YLTAIRHCTEEIESTSSNHTKALARLLRATVYIFTSQSTKAIEDLTQLVEDTSVDPKIKV 136
           Y  AIR   E +     ++ KA   L    +  +  Q  +AI++    V     DP+   
Sbjct: 257 YDQAIREYREAVR-LKPDYAKAHNNL--GILLDYRGQLDEAIKEYYAAVRLRPDDPEAHY 313

Query: 137 NAHIKRAVVHLHAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDK 196
           N  +  A+   +A  +  + F D   A K+ P  A+++Y+ G ++C  G  +EA++ L +
Sbjct: 314 NLGV--ALASRNALDEAAQEFRD---AVKLRPGYAEAHYKLGYVFCRKGMLDEAVKELRE 368

Query: 197 TIALNPNFHVARAQRHFVVHKMIVPGDRERVEQSLKEFRNFVDTHSNVVEACTLFAQVLV 256
            I L PN+    ++ H+ +   +V G ++ ++ +++E ++ +       EA         
Sbjct: 369 AIWLRPNY----SEAHYNLG--VVFGKKDLMDDAIRELKDAIRLRPEYAEAHYNLGLAFD 422

Query: 257 DQEDFDGAEEYFNRSIRVDPENASLYVHRAMLMLQARGNVDEAIKLIEKAISIDKSCMFA 316
            +   D A   +  +IR+ P++     +   + L  +G ++E IK   + + +      A
Sbjct: 423 YKGLLDDAIREYREAIRLKPDDVKAR-NNLGVALDDKGLLEETIKEFREVVWLKPDDPQA 481

Query: 317 YETLGTIEVQRGRLEEAVKCFNKALPLARDEAE 349
           +  LG    ++G L+ A++ F +A  L  D AE
Sbjct: 482 HYNLGLALSKKGLLDHAIREFREAYRLKPDLAE 514



 Score = 53.5 bits (127), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 74/374 (19%), Positives = 161/374 (43%), Gaps = 50/374 (13%)

Query: 155 KAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQRHFV 214
           +A  +  EA  + P+ A+++Y  G      GQY++A+R   + + L P++  A+A  +  
Sbjct: 225 EAIREFREAVWLKPDDAEAHYNLGLALSKKGQYDQAIREYREAVRLKPDY--AKAHNNL- 281

Query: 215 VHKMIVPGDRERVEQSLKEFRNFVDTHSNVVEACTLFAQVLVDQEDFDGAEEYFNRSIRV 274
               I+   R ++++++KE+   V    +  EA       L  +   D A + F  ++++
Sbjct: 282 ---GILLDYRGQLDEAIKEYYAAVRLRPDDPEAHYNLGVALASRNALDEAAQEFRDAVKL 338

Query: 275 DPENASLYVHRAMLMLQARGNVDEAIKLIEKAISIDKSCMFAYETLGTIEVQRGRLEEAV 334
            P  A  +     +  + +G +DEA+K + +AI +  +   A+  LG +  ++  +++A+
Sbjct: 339 RPGYAEAHYKLGYVFCR-KGMLDEAVKELREAIWLRPNYSEAHYNLGVVFGKKDLMDDAI 397

Query: 335 KCFNKALPLARDEAELSHIYSLRDAAIAQMKVCERYNIKKKVSPRSQNITKNEKLAIKQL 394
           +    A+ L  + AE            A   +   ++ K  +             AI++ 
Sbjct: 398 RELKDAIRLRPEYAE------------AHYNLGLAFDYKGLLDD-----------AIREY 434

Query: 395 RENNDIIIRPADKGGKT---VVMDKADYTQKMTSILNSNDYEIIPGDPTKTIEESEKYGN 451
           RE   I ++P D   +    V +D     ++         + + P DP            
Sbjct: 435 REA--IRLKPDDVKARNNLGVALDDKGLLEETIKEFREVVW-LKPDDPQAHYNLGLA--- 488

Query: 452 LENESGQKHAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIA 511
           L  +    HA  +F +A+       ++ P++A+++Y    ++   G  +EA+R   + + 
Sbjct: 489 LSKKGLLDHAIREFREAY-------RLKPDLAEAFYNLAVVFGKKGLLDEAIREYREAVR 541

Query: 512 LNPNFHVARAQRHF 525
           L P++    A+ H+
Sbjct: 542 LRPDY----AEAHY 551



 Score = 48.5 bits (114), Expect = 0.009,   Method: Compositional matrix adjust.
 Identities = 53/208 (25%), Positives = 99/208 (47%), Gaps = 23/208 (11%)

Query: 168 PNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQRHFVVHKMIVPGDRERV 227
           P   +++Y  G  Y     Y+EA+  L   + L P+     A  H+ +   +V  +R ++
Sbjct: 782 PEDVNAHYYLGLAYNYKCMYDEAVGELLAALRLKPD----DANTHYNLG--VVMANRGQL 835

Query: 228 EQSLKEFR-------NFVDTHSNVVEACTLFAQVLVDQEDFDGAEEYFNRSIRVDPENAS 280
           + ++ E+R       ++   H+N+     L  + LVD    D   EY   ++R+ PE+A+
Sbjct: 836 DDAINEYREALRIKPDYARAHNNL--GIILDYRGLVD----DAIVEYLA-ALRLQPEDAN 888

Query: 281 LYVHRAMLMLQARGNVDEAIKLIEKAISIDKSCMFAYETLGTIEVQRGRLEEAVKCFNKA 340
            + +   L    +G VD+A+  + + I +      A+  LG I  ++G L+EA+  +N A
Sbjct: 889 AHYNLG-LAYDNKGLVDDAVGELRETIRLKPDDANAHYNLGVILGKKGLLKEAIDEYNIA 947

Query: 341 LPLARDEAELSH--IYSLRDAAIAQMKV 366
           + L  D AE  +   ++L  A +  M V
Sbjct: 948 VHLRPDYAEAYYNLGFALDTANMGNMAV 975


>gi|448085391|ref|XP_004195848.1| Piso0_005271 [Millerozyma farinosa CBS 7064]
 gi|359377270|emb|CCE85653.1| Piso0_005271 [Millerozyma farinosa CBS 7064]
          Length = 603

 Score = 79.7 bits (195), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 86/346 (24%), Positives = 151/346 (43%), Gaps = 50/346 (14%)

Query: 42  PDGLSNGVELTNGDTNESHELDLLSK----AKRAFEHEDYLTAIRHCTEEIESTSSNHTK 97
           PDG  N   L N    E++++D LSK    A +A    +Y  A++    +  + +++  K
Sbjct: 288 PDGYENADTLFNQAV-EAYKVDGLSKDSEDACKATIALEYSAAMKFLKNDPIAAATDIKK 346

Query: 98  ALARLLRATVYIFTSQSTKAIEDLTQLVEDTSVDPKIKVNAHIKRAVVHLHAASDFTKAF 157
           A A   R   Y+F                               RA+++   AS F +A 
Sbjct: 347 AFALKPRPKTYVF-------------------------------RALINADKAS-FAEAI 374

Query: 158 ADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQRHFVVHK 217
           AD +EA+++DP   D++Y  GQ+Y L G   +A  N      LNPN   A  Q   + +K
Sbjct: 375 ADFEEAKRIDPKFPDTFYHLGQLYYLTGDLSKAEDNFTTAKDLNPNNVYAHIQLACITYK 434

Query: 218 MIVPGDRERVEQSLKEFRNFVDTHSNVVEACTLFAQVLVDQEDFDGAEEYFNRSIRVDPE 277
               GD +  E    E +    T     E    + ++L D+ +   A + F+ + R+   
Sbjct: 435 N---GDIKAAESKFTEAKLKFPTSP---EVPNYYGEILADRGEIQAACKQFDTADRLQKA 488

Query: 278 ------NASLYVHRAMLMLQ-ARGNVDEAIKLIEKAISIDKSCMFAYETLGTIEVQRGRL 330
                  A   +++A L+ + +   +DEA  L+ +A  +D     A  +L  I++Q+ ++
Sbjct: 489 LPTYSVGALPLINKATLISRDSLEKMDEAENLLTEACELDPRSELARISLAQIKLQKEQV 548

Query: 331 EEAVKCFNKALPLARDEAELSHIYSLRDAAIAQMKVCERYNIKKKV 376
           +EA+K F ++  LAR   E     S  +A   Q ++ +   + KK+
Sbjct: 549 DEAIKLFEESSDLARTIEEKVQATSFAEATKMQKRIKKDPVLTKKI 594



 Score = 47.8 bits (112), Expect = 0.014,   Method: Compositional matrix adjust.
 Identities = 21/53 (39%), Positives = 31/53 (58%)

Query: 463 SDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPN 515
           + F +A AD +EA+++DP   D++Y  GQ+Y L G   +A  N      LNPN
Sbjct: 368 ASFAEAIADFEEAKRIDPKFPDTFYHLGQLYYLTGDLSKAEDNFTTAKDLNPN 420


>gi|254414341|ref|ZP_05028108.1| Tetratricopeptide repeat family [Coleofasciculus chthonoplastes PCC
           7420]
 gi|196179016|gb|EDX74013.1| Tetratricopeptide repeat family [Coleofasciculus chthonoplastes PCC
           7420]
          Length = 717

 Score = 79.7 bits (195), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 82/375 (21%), Positives = 164/375 (43%), Gaps = 41/375 (10%)

Query: 138 AHIKRAVVHLHAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKT 197
           A   R +V  H  + +T+A    ++A K+ PN  ++++ RG      G+ E+A+ + D+ 
Sbjct: 247 AWNNRGLVLFHL-TRYTEAVTSCEKATKLQPNYPEAWFHRGNALFSLGRLEDAIASYDQA 305

Query: 198 IALNPNFHVARAQRHFVVHKMIVPGDRERVEQSLKEFRNFVDTHSNVVEACTLFAQVLVD 257
           + L P+ +     R   ++ +       R  +++   +N    + +  EA  +    L+ 
Sbjct: 306 LQLKPDDYATWGNRGSALYSL------GRYREAVSSCQNATYFNPDYAEAWYMQGLALMQ 359

Query: 258 QEDFDGAEEYFNRSIRVDPENASLYVHRAMLMLQARGNVDEAIKLIEKAISIDKSCMFAY 317
            E  + A    +++  + P+ A  +++R  L+ Q  G++ +AI   ++A ++    + A+
Sbjct: 360 GEQPNAAIACLDKATALKPDYAQAWLYRGHLLFQL-GHLADAIASCQQATTLQPDYVEAW 418

Query: 318 ETLGTIEVQRGRLEEAVKCFNKALPLARDEAELSHIYSLRDAAIAQMKVCERYNIKKKVS 377
              G   +Q  R  EA+ C ++ + L  +  E    +  R   + Q+   ER  ++  +S
Sbjct: 419 SIQGIALMQLQRPHEAIACLDRVVELYPEHPE---AWKHRGTVLCQL---ER--LEDAIS 470

Query: 378 PRSQNITKNEKLAIKQLRENNDIIIRPADKGGKTVVMDKADYTQKMTSILNSNDYEIIPG 437
              + IT              D      +KG   + +D+ D    +T+    N  E+ P 
Sbjct: 471 SFDRAITLKP-----------DYFQAWYNKGLLLMHLDRPD--AAITTF--DNALELQP- 514

Query: 438 DPTKTIEESEKYGNLENESGQKHAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFG 497
              K        GNL  + G+  A      A A  D+A  + PNVA+++  RG      G
Sbjct: 515 ---KLYPAWVNRGNLLLQEGRWDA------AIASYDQALAIQPNVAEAWANRGIALEKLG 565

Query: 498 QYEEALRNLDKTIAL 512
           +Y++AL + D+ + L
Sbjct: 566 RYQDALDSYDQALVL 580



 Score = 67.4 bits (163), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 87/413 (21%), Positives = 163/413 (39%), Gaps = 50/413 (12%)

Query: 128 TSVDPKIKVNAHIKRAVVHLHAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQY 187
           T  +P + V A   RA   L+    + +A A   +A    P+   ++Y +G +    G+ 
Sbjct: 102 TQFNPDLAV-AWGNRAST-LYNLGQYEEALASCQQATHCQPDYVQAWYMQGLVLMNGGRK 159

Query: 188 EEALRNLDKTIALNPNFHVARAQRHFVVHKMIVPGDRERVEQSLKEFRNFVDTHSNVVEA 247
           EEAL + D+  +LN ++  A   + +++  +       R  ++L  ++  V    N  E 
Sbjct: 160 EEALTSFDQATSLNHDYLEAWKHKGWILFNL------NRYTEALDSWQQAVSLQPNDYEV 213

Query: 248 CTLFAQVLVDQEDFDGAEEYFNRSIRVDPENASLYVHRAMLMLQARGNVDEAIKLIEKAI 307
                      E  D A   + ++I + P+    + +R +++        EA+   EKA 
Sbjct: 214 WFQQGNTCYRLERLDDALASYEKAITLQPDAPEAWNNRGLVLFHLT-RYTEAVTSCEKAT 272

Query: 308 SIDKSCMFAYETLGTIEVQRGRLEEAVKCFNKALPLARDEAEL-----SHIYSL---RDA 359
            +  +   A+   G      GRLE+A+  +++AL L  D+        S +YSL   R+A
Sbjct: 273 KLQPNYPEAWFHRGNALFSLGRLEDAIASYDQALQLKPDDYATWGNRGSALYSLGRYREA 332

Query: 360 AIAQMKVCERYNIKKKVSPRSQNITKNEKLAIKQLRENNDIIIRPADKGGKTVVMDKA-- 417
               +  C+        +P        + LA+ Q  + N  I            +DKA  
Sbjct: 333 ----VSSCQN---ATYFNPDYAEAWYMQGLALMQGEQPNAAI----------ACLDKATA 375

Query: 418 ---DYTQKMTSILNSNDYEIIPGDPTKTIEESEKYGNLENESGQKHAASDFT-------- 466
              DY Q   + L         G     I   ++   L+ +  +  +             
Sbjct: 376 LKPDYAQ---AWLYRGHLLFQLGHLADAIASCQQATTLQPDYVEAWSIQGIALMQLQRPH 432

Query: 467 KAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVA 519
           +A A LD   ++ P   +++  RG + C   + E+A+ + D+ I L P++  A
Sbjct: 433 EAIACLDRVVELYPEHPEAWKHRGTVLCQLERLEDAISSFDRAITLKPDYFQA 485



 Score = 63.9 bits (154), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 73/368 (19%), Positives = 157/368 (42%), Gaps = 40/368 (10%)

Query: 156 AFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQRHFVV 215
           A A LD+A  + P+ A ++  RG +    G   +A+ +  +   L P++  A + +   +
Sbjct: 366 AIACLDKATALKPDYAQAWLYRGHLLFQLGHLADAIASCQQATTLQPDYVEAWSIQGIAL 425

Query: 216 HKMIVPGDRERVEQSLKEFRNFVDTHSNVVEACTLFAQVLVDQEDFDGAEEYFNRSIRVD 275
            ++      +R  +++      V+ +    EA      VL   E  + A   F+R+I + 
Sbjct: 426 MQL------QRPHEAIACLDRVVELYPEHPEAWKHRGTVLCQLERLEDAISSFDRAITLK 479

Query: 276 PENASLYVHRAMLMLQARGNVDEAIKLIEKAISIDKSCMFAYETLGTIEVQRGRLEEAVK 335
           P+    + ++ +L++      D AI   + A+ +      A+   G + +Q GR + A+ 
Sbjct: 480 PDYFQAWYNKGLLLMHL-DRPDAAITTFDNALELQPKLYPAWVNRGNLLLQEGRWDAAIA 538

Query: 336 CFNKALPLARDEAELSHIYSLRDAAIAQMKVCERYNIKKKVSPRSQNITKNEKLAIKQLR 395
            +++AL +  + AE    ++ R  A+ ++              R Q+   +   A+  + 
Sbjct: 539 SYDQALAIQPNVAE---AWANRGIALEKLG-------------RYQDALDSYDQAL--VL 580

Query: 396 ENNDIIIRPADKGGKTVVMDKADYTQKMTSILNSNDYEIIPGDPTKTIEESEKYGNLENE 455
           +++D   +  +  G T++     Y   + S  N+ D++  P DP           NL   
Sbjct: 581 QSDDA--KTWNHHGVTLIQ-LGRYQDALISFSNALDHQ--PDDPETWNNRGLALDNL--- 632

Query: 456 SGQKHAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPN 515
                    + +A    ++A +++ + A ++  RG      G+ EEA+ + D+ + LNP+
Sbjct: 633 -------GRYEEAMVCFEQAIELNSDYAQAWNNRGVALRNLGREEEAILSFDQALELNPD 685

Query: 516 FHVARAQR 523
           +  A   R
Sbjct: 686 YPEAWNNR 693



 Score = 60.8 bits (146), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 67/382 (17%), Positives = 149/382 (39%), Gaps = 28/382 (7%)

Query: 153 FTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQRH 212
           + +A A  ++A +  PN+ + ++  G      G ++ AL N +K I L P++  A   + 
Sbjct: 23  YGEAIASFEKAAQFHPNMPEIWFHWGNTCFHLGWFDAALTNYEKAITLKPDYSEAWFNQG 82

Query: 213 FVVHKMIVPGDRERVEQSLKEFRNFVDTHSNVVEACTLFAQVLVDQEDFDGAEEYFNRSI 272
            ++ K+       R+E +L  +      + ++  A    A  L +   ++ A     ++ 
Sbjct: 83  NILFKL------GRLEDALASYDQATQFNPDLAVAWGNRASTLYNLGQYEEALASCQQAT 136

Query: 273 RVDPENASLYVHRAMLMLQARGNVDEAIKLIEKAISIDKSCMFAYETLGTIEVQRGRLEE 332
              P+    +  + ++++   G  +EA+   ++A S++   + A++  G I     R  E
Sbjct: 137 HCQPDYVQAWYMQGLVLMNG-GRKEEALTSFDQATSLNHDYLEAWKHKGWILFNLNRYTE 195

Query: 333 AVKCFNKALPLARDEAELSHIYSLRDAAIAQMKVCER----------YNIKKKVSPRSQN 382
           A+  + +A+ L  ++ E+            Q   C R          Y     + P +  
Sbjct: 196 ALDSWQQAVSLQPNDYEVW---------FQQGNTCYRLERLDDALASYEKAITLQPDAPE 246

Query: 383 ITKNEKLAIKQLRENNDIIIRPADKGGKTVVMDKADYTQKMTSILNSNDYEIIPGDPTKT 442
              N  L +  L    + +    +K  K        +  +  ++ +    E       + 
Sbjct: 247 AWNNRGLVLFHLTRYTEAVTS-CEKATKLQPNYPEAWFHRGNALFSLGRLEDAIASYDQA 305

Query: 443 IE-ESEKYGNLENESGQKHAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEE 501
           ++ + + Y    N     ++   + +A +    A   +P+ A+++Y +G       Q   
Sbjct: 306 LQLKPDDYATWGNRGSALYSLGRYREAVSSCQNATYFNPDYAEAWYMQGLALMQGEQPNA 365

Query: 502 ALRNLDKTIALNPNFHVARAQR 523
           A+  LDK  AL P++  A   R
Sbjct: 366 AIACLDKATALKPDYAQAWLYR 387



 Score = 58.5 bits (140), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 39/195 (20%), Positives = 91/195 (46%), Gaps = 7/195 (3%)

Query: 155 KAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQRHFV 214
           +A A LD   ++ P   +++  RG + C   + E+A+ + D+ I L P++  A   +  +
Sbjct: 433 EAIACLDRVVELYPEHPEAWKHRGTVLCQLERLEDAISSFDRAITLKPDYFQAWYNKGLL 492

Query: 215 VHKMIVPGDRERVEQSLKEFRNFVDTHSNVVEACTLFAQVLVDQEDFDGAEEYFNRSIRV 274
           +  +      +R + ++  F N ++    +  A      +L+ +  +D A   +++++ +
Sbjct: 493 LMHL------DRPDAAITTFDNALELQPKLYPAWVNRGNLLLQEGRWDAAIASYDQALAI 546

Query: 275 DPENASLYVHRAMLMLQARGNVDEAIKLIEKAISIDKSCMFAYETLGTIEVQRGRLEEAV 334
            P  A  + +R  + L+  G   +A+   ++A+ +       +   G   +Q GR ++A+
Sbjct: 547 QPNVAEAWANRG-IALEKLGRYQDALDSYDQALVLQSDDAKTWNHHGVTLIQLGRYQDAL 605

Query: 335 KCFNKALPLARDEAE 349
             F+ AL    D+ E
Sbjct: 606 ISFSNALDHQPDDPE 620



 Score = 50.8 bits (120), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 53/211 (25%), Positives = 96/211 (45%), Gaps = 9/211 (4%)

Query: 130 VDPKIKVNAHIKRAVVHLHAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEE 189
           + PK+   A + R  + L     +  A A  D+A  + PNVA+++  RG      G+Y++
Sbjct: 512 LQPKL-YPAWVNRGNLLLQEGR-WDAAIASYDQALAIQPNVAEAWANRGIALEKLGRYQD 569

Query: 190 ALRNLDKTIALNPNFHVARAQRHFVVHKMIVPGDRERVEQSLKEFRNFVDTHSNVVEACT 249
           AL + D+ + L  +   A+   H  V  +I  G   R + +L  F N +D   +  E   
Sbjct: 570 ALDSYDQALVLQSD--DAKTWNHHGV-TLIQLG---RYQDALISFSNALDHQPDDPETWN 623

Query: 250 LFAQVLVDQEDFDGAEEYFNRSIRVDPENASLYVHRAMLMLQARGNVDEAIKLIEKAISI 309
                L +   ++ A   F ++I ++ + A  + +R +  L+  G  +EAI   ++A+ +
Sbjct: 624 NRGLALDNLGRYEEAMVCFEQAIELNSDYAQAWNNRGV-ALRNLGREEEAILSFDQALEL 682

Query: 310 DKSCMFAYETLGTIEVQRGRLEEAVKCFNKA 340
           +     A+   G      GR EEA   F +A
Sbjct: 683 NPDYPEAWNNRGLALRHLGREEEANASFEQA 713



 Score = 44.7 bits (104), Expect = 0.14,   Method: Compositional matrix adjust.
 Identities = 74/368 (20%), Positives = 138/368 (37%), Gaps = 48/368 (13%)

Query: 170 VADSYYQRGQIYCLFGQYEEALRNLDKTIALNPN-----FHVARAQRHFVVHKMIVPGDR 224
           +A+ + Q+G  Y   G+Y EA+ + +K    +PN     FH      H            
Sbjct: 6   LANQWLQQGIEYFQIGRYGEAIASFEKAAQFHPNMPEIWFHWGNTCFHL----------- 54

Query: 225 ERVEQSLKEFRNFVDTHSNVVEACTLFAQVLVDQEDFDGAEEYFNRSIRVDPENASLYVH 284
              + +L  +   +    +  EA      +L      + A   ++++ + +P+ A  + +
Sbjct: 55  GWFDAALTNYEKAITLKPDYSEAWFNQGNILFKLGRLEDALASYDQATQFNPDLAVAWGN 114

Query: 285 RAMLMLQARGNVDEAIKLIEKAISIDKSCMFAYETLGTIEVQRGRLEEAVKCFNKALPLA 344
           RA   L   G  +EA+   ++A       + A+   G + +  GR EEA+  F++A  L 
Sbjct: 115 RAS-TLYNLGQYEEALASCQQATHCQPDYVQAWYMQGLVLMNGGRKEEALTSFDQATSLN 173

Query: 345 RDEAE-LSH----IYSLRDAAIA----QMKVCERYNIKKKVSPRSQNITKNEKLAIKQLR 395
            D  E   H    +++L     A    Q  V  + N  +    +     + E+L      
Sbjct: 174 HDYLEAWKHKGWILFNLNRYTEALDSWQQAVSLQPNDYEVWFQQGNTCYRLERLDDALAS 233

Query: 396 ENNDIIIRP----ADKGGKTVVMDKADYTQKMTSILNSNDYEIIPGDPTKTIEESE---K 448
               I ++P    A      V+     YT+ +TS   +   ++ P  P            
Sbjct: 234 YEKAITLQPDAPEAWNNRGLVLFHLTRYTEAVTSCEKAT--KLQPNYPEAWFHRGNALFS 291

Query: 449 YGNLENESGQKHAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDK 508
            G LE+             A A  D+A ++ P+   ++  RG      G+Y EA+ +   
Sbjct: 292 LGRLED-------------AIASYDQALQLKPDDYATWGNRGSALYSLGRYREAVSSCQN 338

Query: 509 TIALNPNF 516
               NP++
Sbjct: 339 ATYFNPDY 346


>gi|427707826|ref|YP_007050203.1| hypothetical protein Nos7107_2446 [Nostoc sp. PCC 7107]
 gi|427360331|gb|AFY43053.1| Tetratricopeptide TPR_1 repeat-containing protein [Nostoc sp. PCC
           7107]
          Length = 708

 Score = 79.7 bits (195), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 107/445 (24%), Positives = 172/445 (38%), Gaps = 55/445 (12%)

Query: 117 AIEDLTQLVEDTSVDPKIKVNAHIKRAVVHLHAASDFTKAFADLDEAEKVDPNVADSYYQ 176
           AIE   Q +   S++PK    A+  R     +   D   A  D ++A K++P  A +YY 
Sbjct: 268 AIEAYNQAI---SINPKYSY-AYNDRGNARYYLG-DKQGALKDYNQAIKINPEYAFAYYN 322

Query: 177 RGQIYCLFGQYEEALRNLDKTIALNPNFHVA---RAQRHFVVHKMIVPGDRERVEQSLKE 233
           RG I   F     AL + ++ + LNPN+  A   R   H+ +      GD++R   +L +
Sbjct: 323 RGNILYDFDDKRGALADYNQALKLNPNYSSAYNNRGNSHYAL------GDKQR---ALAD 373

Query: 234 FRNFVDTHSNVVEACTLFAQVLVDQEDFDGAEEYFNRSIRVDPENASLYVHRAMLMLQAR 293
           +   +       EA            D  GA   +N++I+++P     Y +R        
Sbjct: 374 YNLAIKVDPGNSEAYYNRGNTRAILGDKQGAITDYNQAIKINPNYVFAYNNRGNTRYDL- 432

Query: 294 GNVDEAIKLIEKAISIDKSCMFAYETLGTIEVQRGRLEEAVKCFNKALPLARDEAELSHI 353
           G+   AI    +A+ I+ +   AY   G      G  + A+  +  AL    + AE    
Sbjct: 433 GDYQGAIADYTQAVKINPNHSSAYNGRGNSRYYLGDKQGALNDYTLALKANPNNAE---A 489

Query: 354 YSLRDAAIAQMK----VCERYNIKKKVSPRSQNITKNEKLAIKQLRENNDIIIRPADKGG 409
           Y  R  A + +K        YN   K++P           A   L E    +        
Sbjct: 490 YYNRGNARSDLKDSPAAIADYNEAIKLNPNYSAAYNGRGNAFYYLGEKQKAL-------- 541

Query: 410 KTVVMDKADYTQKMTSILNSNDYEIIPG--------------DPTKTIEESEKYGNLENE 455
                  ADY+Q + S  N+++     G              D T+ I+ +  Y    N 
Sbjct: 542 -------ADYSQAIKSDANNSEAYYNRGNVYFDLGNKKGAISDYTQAIKINPNYAYAYNN 594

Query: 456 SGQ-KHAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNP 514
            G  K+  +D   A AD ++A K+ PN A +YY R  +Y   G  E A+ + ++ I  N 
Sbjct: 595 RGNTKYDLNDLQGALADYNQALKLLPNYAFAYYNRANVYKNLGDLEGAIADYNRAIINNS 654

Query: 515 NFHVARAQRHFVWTSTLAELMAFSD 539
           N+  A   R         +    SD
Sbjct: 655 NYAQAYQNRGLARYDLGEQQAGISD 679



 Score = 53.1 bits (126), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 84/381 (22%), Positives = 151/381 (39%), Gaps = 43/381 (11%)

Query: 168 PNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQRHFVVHKMIVPGDRERV 227
           P   D Y Q G  Y   G Y+ A+   ++ I++NP +  A   R    + +   GD++  
Sbjct: 247 PKADDFYIQGGDKYKK-GDYKGAIEAYNQAISINPKYSYAYNDRGNARYYL---GDKQ-- 300

Query: 228 EQSLKEFRNFVDTHSNVVEACTLFAQVLVDQEDFDGAEEYFNRSIRVDPENASLYVHRAM 287
             +LK++   +  +     A      +L D +D  GA   +N++++++P  +S Y +R  
Sbjct: 301 -GALKDYNQAIKINPEYAFAYYNRGNILYDFDDKRGALADYNQALKLNPNYSSAYNNRGN 359

Query: 288 LMLQARGNVDEAIKLIEKAISIDKSCMFAYETLGTIEVQRGRLEEAVKCFNKALPLARDE 347
               A G+   A+     AI +D     AY   G      G  + A+  +N+A+ +    
Sbjct: 360 SHY-ALGDKQRALADYNLAIKVDPGNSEAYYNRGNTRAILGDKQGAITDYNQAIKI---- 414

Query: 348 AELSHIYSLRDAAIAQMKVCERYNIKKKVSPRSQNITKNEKLAIKQLRENNDIIIRPADK 407
              +++++  +      +   RY++        Q    +   A+K         I P   
Sbjct: 415 -NPNYVFAYNN------RGNTRYDLGD-----YQGAIADYTQAVK---------INPNHS 453

Query: 408 GGKTVVMDKADYTQKMTSILNSNDYEI-IPGDPTKTIEESEKYGNLENESGQKHAASDFT 466
                  +   Y       LN  DY + +  +P      +E Y N  N    +    D  
Sbjct: 454 SAYNGRGNSRYYLGDKQGALN--DYTLALKANPN----NAEAYYNRGNA---RSDLKDSP 504

Query: 467 KAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQRHFV 526
            A AD +EA K++PN + +Y  RG  +   G+ ++AL +  + I  + N   A   R  V
Sbjct: 505 AAIADYNEAIKLNPNYSAAYNGRGNAFYYLGEKQKALADYSQAIKSDANNSEAYYNRGNV 564

Query: 527 WTSTLAELMAFSDEFMIPKIT 547
           +     +  A SD     KI 
Sbjct: 565 YFDLGNKKGAISDYTQAIKIN 585


>gi|325185760|emb|CCA20240.1| Mitochondrial Protein Translocase (MPT) Family puta [Albugo laibachii
            Nc14]
          Length = 1050

 Score = 79.7 bits (195), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 73/275 (26%), Positives = 125/275 (45%), Gaps = 16/275 (5%)

Query: 99   LARLLRATVYIFTSQSTKAIEDLTQLVE--DTSVDPKIKVNAHIKRAVVHLHAASDFTKA 156
            LA  ++ATV    S     + D+T  +E  D S++  + VN+ +K+A   +    DF +A
Sbjct: 774  LADDIKATVLNLHSSFLYILGDVTAAIEKIDQSLEINVCVNSLVKKAGF-MTELGDFEEA 832

Query: 157  FADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALN---PNFHVARAQRHF 213
            +   DEA  +D    D+Y  +GQ   L G Y +A+  L +T+A +   P  HV  A   +
Sbjct: 833  YKLYDEALILDCRSPDAYLHKGQTALLQGSYSKAVEWLRRTMARSVAIPIIHVIYATALY 892

Query: 214  VVHKMIVPGDRERVEQSLKEFRNFVDTHSNVVEACTLFAQVLVDQEDFDGAEEYFNRSIR 273
                ++   D          FR       +  E    + ++L DQ D+  A ++F  +  
Sbjct: 893  RSGSILQANDT---------FREACVLFPDSAEIHLFYGEILADQGDYAKAMQHFVLAHD 943

Query: 274  VDPENASLYVHRAMLMLQARGNVDEAIKLIEKAISIDKSCMFAYETLGTIEVQRGRLEEA 333
            + PE    +++   + + A  N   AI+   +A+ +D  C  A+  +  +   +GR  EA
Sbjct: 944  ILPECPLPFLNAGRVYV-ATNNPSSAIEHFNQALKVDPRCSSAHLDIAQVLFAQGRTSEA 1002

Query: 334  VKCFNKALPLARDEAELSHIYSLRDAAIAQMKVCE 368
             + F+ A    R   E+  +YS R  A AQ+K  E
Sbjct: 1003 FRHFDAAANCCRFLPEVEEVYSSRAVANAQLKATE 1037



 Score = 39.3 bits (90), Expect = 5.5,   Method: Compositional matrix adjust.
 Identities = 32/108 (29%), Positives = 52/108 (48%), Gaps = 11/108 (10%)

Query: 425 SILN-SNDYEIIPGDPTKTIEESEK-------YGNLENESGQKHAASDFTKAFADLDEAE 476
           ++LN  + +  I GD T  IE+ ++         +L  ++G      DF +A+   DEA 
Sbjct: 781 TVLNLHSSFLYILGDVTAAIEKIDQSLEINVCVNSLVKKAGFMTELGDFEEAYKLYDEAL 840

Query: 477 KVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALN---PNFHVARA 521
            +D    D+Y  +GQ   L G Y +A+  L +T+A +   P  HV  A
Sbjct: 841 ILDCRSPDAYLHKGQTALLQGSYSKAVEWLRRTMARSVAIPIIHVIYA 888


>gi|145530013|ref|XP_001450788.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
 gi|124418413|emb|CAK83391.1| unnamed protein product [Paramecium tetraurelia]
          Length = 652

 Score = 79.7 bits (195), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 85/418 (20%), Positives = 176/418 (42%), Gaps = 59/418 (14%)

Query: 153 FTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQRH 212
           + +A    ++A  ++P    +++ +G   C   +++EA+   +K IA+NP +  A   + 
Sbjct: 33  YQEAIECYEKAIAINPKYDSAWHNKGWALCYLNKFQEAIECNNKAIAINPKYDSAWQNKG 92

Query: 213 FVVHKM---------------IVPG-------------DRERVEQSLKEFRNFVDTHSNV 244
             +HK+               I P              D+ + +++++ +   +  +S  
Sbjct: 93  SALHKLNKYQEAIKCYDKAIAINPKYDSAWHSKGQALEDQNKYQEAIECYDKAIAINSKY 152

Query: 245 VEACTLFAQVLVDQEDFDGAEEYFNRSIRVDPENASLYVHRAMLMLQARGNVDEAIKLIE 304
             A     Q L +   +  A + + ++I ++P+  S + H     L    N  EAIK  +
Sbjct: 153 DCAWHSKGQALYNLNQYQKAIQCYEKAIVINPKYDSAW-HNKGSALCNLNNYQEAIKCYD 211

Query: 305 KAISIDKSCMFAYETLGTIEVQRGRLEEAVKCFNKALPLARDEAELSHIYSLRDAAIAQ- 363
           KAI+I+     A+   G    +  + +EA+KC++KA+ +        H   +R+  +   
Sbjct: 212 KAIAINPKYDSAWHNKGWALYKLNKYQEAIKCYDKAIYMNPKYDSAWHKMGIRNHYLGWA 271

Query: 364 -------MKVCERYNIKKKVSPRSQNITKNEKLAIKQLRENNDIIIRPADKGGKTVVMDK 416
                   +  E Y+    ++P+  +   N+  A++ L ++    I+  DK   T +  K
Sbjct: 272 LENLNKYQEANECYDKAIAINPKYDSSQFNKGQALEDLIKDQG-AIQSYDKA--TAINPK 328

Query: 417 ADYTQKMTSILNSNDYEIIPGDPTKTIEESEKY-----------GNLENESGQKHAASDF 465
            D + +      SN + I   D  K +EE E Y               N+  + H  + +
Sbjct: 329 YDSSSQ------SNGFCI--QDLNKQLEEIECYIKAIAINPKYDSTWHNKGSELHKLNKY 380

Query: 466 TKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQR 523
            +A    ++A   +PN   ++Y  G   C   +Y+EA++  DK I++N   + A+  +
Sbjct: 381 QEAIECYNKAISFNPNQDSTWYHTGSALCNLNKYQEAIQCYDKAISINHKLNEAQNNK 438



 Score = 68.6 bits (166), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 67/304 (22%), Positives = 140/304 (46%), Gaps = 34/304 (11%)

Query: 62  LDLLSKAKRAFEHEDYLTAIRHCTEEIESTSSNHTKALARLLR----------ATV---- 107
           L+ L+K + A E  D   AI     + +S+  N  +AL  L++          AT     
Sbjct: 272 LENLNKYQEANECYDKAIAI---NPKYDSSQFNKGQALEDLIKDQGAIQSYDKATAINPK 328

Query: 108 YIFTSQSTK-AIEDLTQLVEDT-------SVDPKIKVNAHIKRAVVHLHAASDFTKAFAD 159
           Y  +SQS    I+DL + +E+        +++PK     H K +   LH  + + +A   
Sbjct: 329 YDSSSQSNGFCIQDLNKQLEEIECYIKAIAINPKYDSTWHNKGS--ELHKLNKYQEAIEC 386

Query: 160 LDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQRHFVVHKMI 219
            ++A   +PN   ++Y  G   C   +Y+EA++  DK I++N   + A+  +   ++ + 
Sbjct: 387 YNKAISFNPNQDSTWYHTGSALCNLNKYQEAIQCYDKAISINHKLNEAQNNKGLALYNL- 445

Query: 220 VPGDRERVEQSLKEFRNFVDTHSNVVEACTLFAQVLVDQEDFDGAEEYFNRSIRVDPENA 279
                 + +++++ F   +  +     A       L +   +  A E ++++I ++P+ A
Sbjct: 446 -----NKYQEAIECFNKAIAINPKYDIAWYNKGSALCNLTKYQQAIECYDKAIAINPKYA 500

Query: 280 SLYVHRAMLMLQARGNVDEAIKLIEKAISIDKSCMFAYETLGTIEVQRGRLEEAVKCFNK 339
           S + ++  L L  +    EAI+  +KA++++     A+   G    +  +  EA++C+ K
Sbjct: 501 SAWNNKG-LALDDQNKYQEAIECYDKAMAVNPKYDGAWHNKGFALHKLNKFSEAIECYVK 559

Query: 340 ALPL 343
           A+ +
Sbjct: 560 AIAI 563



 Score = 54.7 bits (130), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 68/385 (17%), Positives = 160/385 (41%), Gaps = 57/385 (14%)

Query: 147 LHAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHV 206
           L+  + + KA    ++A  ++P    +++ +G   C    Y+EA++  DK IA+NP +  
Sbjct: 163 LYNLNQYQKAIQCYEKAIVINPKYDSAWHNKGSALCNLNNYQEAIKCYDKAIAINPKYDS 222

Query: 207 ARAQRHFVVHKMIVPGDRERVEQSLKEFRNFVDTHSNVVEAC-------TLFAQVLVDQE 259
           A   + + ++K+       + ++++K +   +  +     A              L +  
Sbjct: 223 AWHNKGWALYKL------NKYQEAIKCYDKAIYMNPKYDSAWHKMGIRNHYLGWALENLN 276

Query: 260 DFDGAEEYFNRSIRVDPENASLYVHRAML---MLQARGNVDEAIKLIEKAISIDKSCMFA 316
            +  A E ++++I ++P+  S   ++      +++ +G    AI+  +KA +I+     +
Sbjct: 277 KYQEANECYDKAIAINPKYDSSQFNKGQALEDLIKDQG----AIQSYDKATAINPKYDSS 332

Query: 317 YETLG-TIEVQRGRLEEAVKCFNKALPLARDEAELSHIYSLRDAAIAQMKVCERYNIKKK 375
            ++ G  I+    +LEE ++C+ KA+                                  
Sbjct: 333 SQSNGFCIQDLNKQLEE-IECYIKAIA--------------------------------- 358

Query: 376 VSPRSQNITKNEKLAIKQLRENNDIIIRPADKGGKTVVMDKADYTQKMTSILNSNDYEII 435
           ++P+  +   N+   + +L +  +  I   +K         + +    +++ N N Y+  
Sbjct: 359 INPKYDSTWHNKGSELHKLNKYQE-AIECYNKAISFNPNQDSTWYHTGSALCNLNKYQEA 417

Query: 436 PGDPTKTIEESEKYGNLENESGQK-HAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYC 494
                K I  + K    +N  G   +  + + +A    ++A  ++P    ++Y +G   C
Sbjct: 418 IQCYDKAISINHKLNEAQNNKGLALYNLNKYQEAIECFNKAIAINPKYDIAWYNKGSALC 477

Query: 495 LFGQYEEALRNLDKTIALNPNFHVA 519
              +Y++A+   DK IA+NP +  A
Sbjct: 478 NLTKYQQAIECYDKAIAINPKYASA 502



 Score = 50.4 bits (119), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 52/233 (22%), Positives = 108/233 (46%), Gaps = 9/233 (3%)

Query: 299 AIKLIEKAISIDKSCMFAYETLGTIEVQRGRLEEAVKCFNKALPL--ARDEAELSHIYSL 356
           AI+  +K+I+I+ +   A+   G+      + +EA++C+ KA+ +    D A  +  ++L
Sbjct: 2   AIECYDKSIAINPNEDSAWHNKGSALCDLNKYQEAIECYEKAIAINPKYDSAWHNKGWAL 61

Query: 357 RDAAIAQMKVCERYNIKKKVSPRSQNITKNEKLAIKQLRENNDIIIRPADKGGKTVVMDK 416
                 Q  + E  N    ++P+  +  +N+  A+ +L +  +  I+  DK     +  K
Sbjct: 62  CYLNKFQEAI-ECNNKAIAINPKYDSAWQNKGSALHKLNKYQE-AIKCYDKA--IAINPK 117

Query: 417 AD--YTQKMTSILNSNDYEIIPGDPTKTIEESEKYGNLENESGQK-HAASDFTKAFADLD 473
            D  +  K  ++ + N Y+       K I  + KY    +  GQ  +  + + KA    +
Sbjct: 118 YDSAWHSKGQALEDQNKYQEAIECYDKAIAINSKYDCAWHSKGQALYNLNQYQKAIQCYE 177

Query: 474 EAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQRHFV 526
           +A  ++P    +++ +G   C    Y+EA++  DK IA+NP +  A   + + 
Sbjct: 178 KAIVINPKYDSAWHNKGSALCNLNNYQEAIKCYDKAIAINPKYDSAWHNKGWA 230



 Score = 47.0 bits (110), Expect = 0.028,   Method: Compositional matrix adjust.
 Identities = 74/349 (21%), Positives = 147/349 (42%), Gaps = 23/349 (6%)

Query: 190 ALRNLDKTIALNPNFHVARAQRHFVVHKMIVPGDRERVEQSLKEFRNFVDTHSNVVEACT 249
           A+   DK+IA+NPN   A   +   +       D  + +++++ +   +  +     A  
Sbjct: 2   AIECYDKSIAINPNEDSAWHNKGSAL------CDLNKYQEAIECYEKAIAINPKYDSAWH 55

Query: 250 LFAQVLVDQEDFDGAEEYFNRSIRVDPENASLYVHRAMLMLQARGNVDEAIKLIEKAISI 309
                L     F  A E  N++I ++P+  S + ++    L       EAIK  +KAI+I
Sbjct: 56  NKGWALCYLNKFQEAIECNNKAIAINPKYDSAWQNKGS-ALHKLNKYQEAIKCYDKAIAI 114

Query: 310 DKSCMFAYETLGTIEVQRGRLEEAVKCFNKALPLAR--DEAELSHIYSLRDAAIAQMKVC 367
           +     A+ + G     + + +EA++C++KA+ +    D A  S   +L +    Q K  
Sbjct: 115 NPKYDSAWHSKGQALEDQNKYQEAIECYDKAIAINSKYDCAWHSKGQALYNLNQYQ-KAI 173

Query: 368 ERYNIKKKVSPRSQNITKNEKLAIKQLRENNDIIIRPADKGGKTVVMDKAD--YTQKMTS 425
           + Y     ++P+  +   N+  A+  L  N    I+  DK     +  K D  +  K  +
Sbjct: 174 QCYEKAIVINPKYDSAWHNKGSALCNLN-NYQEAIKCYDKA--IAINPKYDSAWHNKGWA 230

Query: 426 ILNSNDYEIIPGDPTKTIEESEKYGNLENESGQKH--------AASDFTKAFADLDEAEK 477
           +   N Y+       K I  + KY +  ++ G ++          + + +A    D+A  
Sbjct: 231 LYKLNKYQEAIKCYDKAIYMNPKYDSAWHKMGIRNHYLGWALENLNKYQEANECYDKAIA 290

Query: 478 VDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQRHFV 526
           ++P    S + +GQ      + + A+++ DK  A+NP +  +     F 
Sbjct: 291 INPKYDSSQFNKGQALEDLIKDQGAIQSYDKATAINPKYDSSSQSNGFC 339



 Score = 45.1 bits (105), Expect = 0.11,   Method: Compositional matrix adjust.
 Identities = 43/224 (19%), Positives = 85/224 (37%), Gaps = 48/224 (21%)

Query: 127 DTSVDPKIKVNAHIKRAVVHLHAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQ 186
           D ++    K+N       + L+  + + +A    ++A  ++P    ++Y +G   C   +
Sbjct: 422 DKAISINHKLNEAQNNKGLALYNLNKYQEAIECFNKAIAINPKYDIAWYNKGSALCNLTK 481

Query: 187 YEEALRNLDKTIALNPNFHVARAQRHFVVHKMIVPGDRERVEQSLKEFRNFVDTHSNVVE 246
           Y++A+   DK IA+NP +  A   +                                   
Sbjct: 482 YQQAIECYDKAIAINPKYASAWNNKGL--------------------------------- 508

Query: 247 ACTLFAQVLVDQEDFDGAEEYFNRSIRVDPENASLYVHRAMLMLQARGNVDEAIKLIEKA 306
                   L DQ  +  A E +++++ V+P+    + H     L       EAI+   KA
Sbjct: 509 -------ALDDQNKYQEAIECYDKAMAVNPKYDGAW-HNKGFALHKLNKFSEAIECYVKA 560

Query: 307 ISIDKSCMFAYETLGTIEVQRG-------RLEEAVKCFNKALPL 343
           I+I+     ++   G      G       + ++A+ CF++AL L
Sbjct: 561 IAINPKDDSSWNNQGKQLYYSGLALHKLQKFKDAISCFDQALNL 604


>gi|448080911|ref|XP_004194757.1| Piso0_005271 [Millerozyma farinosa CBS 7064]
 gi|359376179|emb|CCE86761.1| Piso0_005271 [Millerozyma farinosa CBS 7064]
          Length = 603

 Score = 79.7 bits (195), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 86/346 (24%), Positives = 151/346 (43%), Gaps = 50/346 (14%)

Query: 42  PDGLSNGVELTNGDTNESHELDLLSK----AKRAFEHEDYLTAIRHCTEEIESTSSNHTK 97
           PDG  N   L N    E++++D LSK    A +A    +Y  A++    +  + +++  K
Sbjct: 288 PDGYENADTLFNQAV-EAYKVDDLSKDAENAGKATIALEYSAAMKFLKNDPIAAATDIKK 346

Query: 98  ALARLLRATVYIFTSQSTKAIEDLTQLVEDTSVDPKIKVNAHIKRAVVHLHAASDFTKAF 157
           A A   R   Y+F                               RA+++   AS F +A 
Sbjct: 347 AFALKPRPKTYVF-------------------------------RALINADKAS-FAEAI 374

Query: 158 ADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQRHFVVHK 217
           AD +EA+++DP   D++Y  GQ+Y L G   +A  N      LNPN   A  Q   + +K
Sbjct: 375 ADFEEAKRIDPKFPDTFYHLGQLYYLTGDLSKAEDNFTIAKDLNPNNVYAHIQLACITYK 434

Query: 218 MIVPGDRERVEQSLKEFRNFVDTHSNVVEACTLFAQVLVDQEDFDGAEEYFNRSIRVDPE 277
               GD +  E    E +    T     E    + ++L D+ +   A + F+ + R+   
Sbjct: 435 N---GDIKAAESKFTEAKLKFPTSP---EVPNYYGEILADRGEIQAACKQFDTADRLQKA 488

Query: 278 ------NASLYVHRAMLMLQ-ARGNVDEAIKLIEKAISIDKSCMFAYETLGTIEVQRGRL 330
                  A   +++A L+ + +   +DEA  L+ +A  +D     A  +L  I++Q+ ++
Sbjct: 489 LPTYSVGALPLINKATLISRDSLEKMDEAENLLTEACELDPRSELARISLAQIKLQKEQV 548

Query: 331 EEAVKCFNKALPLARDEAELSHIYSLRDAAIAQMKVCERYNIKKKV 376
           +EA+K F ++  LAR   E     S  +A   Q ++ +   + KK+
Sbjct: 549 DEAIKLFEESSDLARTIEEKVQATSFAEATKMQKRIKKDPVLTKKI 594



 Score = 47.0 bits (110), Expect = 0.025,   Method: Compositional matrix adjust.
 Identities = 21/53 (39%), Positives = 31/53 (58%)

Query: 463 SDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPN 515
           + F +A AD +EA+++DP   D++Y  GQ+Y L G   +A  N      LNPN
Sbjct: 368 ASFAEAIADFEEAKRIDPKFPDTFYHLGQLYYLTGDLSKAEDNFTIAKDLNPN 420


>gi|86608982|ref|YP_477744.1| TPR repeat-containing protein kinase [Synechococcus sp.
           JA-2-3B'a(2-13)]
 gi|86557524|gb|ABD02481.1| tetratricopeptide repeat/protein kinase domain protein
           [Synechococcus sp. JA-2-3B'a(2-13)]
          Length = 1270

 Score = 79.3 bits (194), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 106/445 (23%), Positives = 186/445 (41%), Gaps = 80/445 (17%)

Query: 102 LLRATVYIFTSQSTKAIEDLTQLVEDTSVDPKIKVNAHIKRAVVHLHAASDFTKAFADLD 161
           L RA  Y+ ++    A+ D  Q +    +DP +   A++ R +       D   A AD +
Sbjct: 548 LQRAMAYLSSNTLEPALADCEQALR---LDPNLS-RAYLCRGLAR-QGLGDPGGALADFN 602

Query: 162 EAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNP---NFHVARAQRHFVVHKM 218
            A ++DP +A +Y  RG  +   G  E AL +L++ IAL+P   + + +R + H+++   
Sbjct: 603 RALELDPQMAKAYLNRGIAHLDLGNIEAALSDLNQAIALDPQDASAYSSRGRIHWLLGDP 662

Query: 219 IVP-----GDRERVEQSLKEFRNFVDTHS---NVVEACTLFAQVLVDQEDFDGAEEYFNR 270
           +          ER  Q+ + + N    H+   +   AC  F+QVL          ++  R
Sbjct: 663 LAALRDYTAALERDPQNPQLYFNRGQLHAEREDWPAACEDFSQVL----------QWAAR 712

Query: 271 -SIRVDPE---NASLYVHRAMLMLQARGNVDEAIKLIEKAISIDKSCMFAYETLGTIEVQ 326
             I   PE   NA L   R  +  Q  G+   A+   ++A+  D     AY   G +   
Sbjct: 713 PGIPRGPELLLNAHL---RRGMARQRLGDWQGALADFDQALQGDPQSGLAYFHRGQVRAA 769

Query: 327 RGRLEEAVKCFNKALPL--ARDEAELSHIYSLRDAAIAQMK------VCERYNIKKKVSP 378
            G    A++ +++AL L  A  EA++      RD A AQ++        E+ N   ++ P
Sbjct: 770 LGDGLGAIQDYHQALALGVAVAEADIR-----RDLARAQIQTGDLQAALEQLNEAVRLQP 824

Query: 379 RSQNITKNEKLAIKQLRENNDIIIRPADKGGKTVVMDKADYTQKMTSILNSNDYEIIPGD 438
             +++ +      +QL    + I               ADY +    +L  +     P D
Sbjct: 825 ERRDLRQERAELCRQLGRWPEAI---------------ADYDE----VLRQD-----PQD 860

Query: 439 PTKTIEESEKYGNLENESGQKHAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQ 498
            T  +     +G + N          +  A  DL    + DP+  ++ + RGQ     GQ
Sbjct: 861 WTAWLGRGMAHGQVGN----------WDSAIQDLSRVLQQDPDHREALWHRGQALQQLGQ 910

Query: 499 YEEALRNLDKTIALNPNFHVARAQR 523
            E AL++L++ +  +P   +AR  R
Sbjct: 911 TEAALQDLNRLLQRDPQHRMARLAR 935



 Score = 78.2 bits (191), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 134/573 (23%), Positives = 218/573 (38%), Gaps = 99/573 (17%)

Query: 25   QFIKTYLKSFPNDPILQPDGLSNGVELTNGDTNESHELD------LLSKAKRAFEHEDYL 78
            Q  K YL    N  I   D L N +E    D N++  LD        S+ +  +   D L
Sbjct: 610  QMAKAYL----NRGIAHLD-LGN-IEAALSDLNQAIALDPQDASAYSSRGRIHWLLGDPL 663

Query: 79   TAIRHCTEEIESTSSNHTKALARLLRATVYIFTSQSTKAIEDLTQLVE-----DTSVDPK 133
             A+R  T  +E    N      R     ++        A ED +Q+++          P+
Sbjct: 664  AALRDYTAALERDPQNPQLYFNR---GQLHAEREDWPAACEDFSQVLQWAARPGIPRGPE 720

Query: 134  IKVNAHIKRAVVHLHAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRN 193
            + +NAH++R +       D+  A AD D+A + DP    +Y+ RGQ+    G    A+++
Sbjct: 721  LLLNAHLRRGMAR-QRLGDWQGALADFDQALQGDPQSGLAYFHRGQVRAALGDGLGAIQD 779

Query: 194  LDKTIALNPNFHVARAQ-RHFVVHKMIVPGDRERVEQSLKEFRNFV----DTHSNVVEAC 248
              + +AL     VA A  R  +    I  GD +   + L E         D      E C
Sbjct: 780  YHQALALG--VAVAEADIRRDLARAQIQTGDLQAALEQLNEAVRLQPERRDLRQERAELC 837

Query: 249  TLFAQVLVDQEDFDGAEEYFNRSIRVDPENASLYVHRAMLMLQARGNVDEAIKLIEKAIS 308
                +      D+D         +R DP++ + ++ R M   Q  GN D AI+ + + + 
Sbjct: 838  RQLGRWPEAIADYD-------EVLRQDPQDWTAWLGRGMAHGQV-GNWDSAIQDLSRVLQ 889

Query: 309  IDKSCMFAYETLGTIEVQRGRLEEAVKCFNKALPLARDEAELSHIYSLRDAAIAQMKVCE 368
             D     A    G    Q G+ E A++  N+ L   RD          R A +A+  +  
Sbjct: 890  QDPDHREALWHRGQALQQLGQTEAALQDLNRLL--QRDPQH-------RMARLARGSLLL 940

Query: 369  RYNIKKKVSPRSQ----NITKNEKLAIK---QLRENNDIIIRPADKGGKTV--VMDKADY 419
               ++    P ++     ++  E L +    Q   + D +I+   + G+    +  +A  
Sbjct: 941  TLAVRGTDGPTNRAEQDRVSGTESLELGYYAQAESDFDQVIQEEAQDGEQSRQLYLEAHL 1000

Query: 420  TQKMTSILNSN------DYEII-----PGDPTKTIEESEKY-GNLENESGQKHAA-SDFT 466
             +     L  N      D++ +     PGDP   + E+  Y G    E G    A +DFT
Sbjct: 1001 KRAQVRRLRHNLEGAIADWDRVLELASPGDPEVLVTEALLYRGLCRQERGDLAGALADFT 1060

Query: 467  K---------------------------AFADLDEAEKVD-----PNVADSYYQRGQIYC 494
                                        A ADLD+A  +D      N A +Y QRG ++ 
Sbjct: 1061 ALIQQQPQASQAFALRATVHLALGDQEMALADLDQALSLDRDWGVANAALAYRQRGDLHR 1120

Query: 495  LFGQYEEALRNLDKTIALNPNFHVARAQRHFVW 527
                 E A+ +  + +ALNP  H A   R  +W
Sbjct: 1121 QANCPELAIADYTQALALNPQEHSALLHRALLW 1153



 Score = 69.7 bits (169), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 67/262 (25%), Positives = 115/262 (43%), Gaps = 18/262 (6%)

Query: 50  ELTNGDTNESHEL--DLLSKAKRAFEHEDYLTAIRHCTEEIESTSSNHTKALARLLRATV 107
           E T GD +    L   LL++A+      D+  AI  CT  I+    N ++A ++  R + 
Sbjct: 282 EATLGDVSVDQVLVTRLLARAQEKARQGDFQGAIADCTLAIQLDPQN-SRAYSQ--RGSA 338

Query: 108 YIFTSQSTKAIEDLTQLVEDTSVDPKIKVNAHIKRAVVHLHAASDFTKAFADLDEAEKVD 167
              +     AI D TQ+++  + D +   N  I R     +   D+  A AD  +A  ++
Sbjct: 339 RYKSGDLAGAIADYTQVIQ-LAGDARAYFNRGIAR-----YRLEDYEGAVADYTQALGLN 392

Query: 168 PNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQRHFVVHKMIVPGDRERV 227
           P  A +YY RG  Y    Q ++A+ +  + I LNP    A        ++ +V G     
Sbjct: 393 PQWAVAYYNRGNAYRQLNQQQQAIEDYSRAIELNPEDVRA------YFNRGVVRGHLGDA 446

Query: 228 EQSLKEFRNFVDTHSNVVEACTLFAQVLVDQEDFDGAEEYFNRSIRVDPENASLYVHRAM 287
           + +  +F   +       EA        V   D  GA E + +++++DP +   Y HR  
Sbjct: 447 QGAAADFSEVIKRDPQDGEAYFNRGVARVQLSDLQGAVEDYTQALQLDPRHGKAYYHRG- 505

Query: 288 LMLQARGNVDEAIKLIEKAISI 309
           L  QA G+   A++   +A+S+
Sbjct: 506 LARQALGDPQGAVEDFSQALSL 527



 Score = 46.6 bits (109), Expect = 0.035,   Method: Compositional matrix adjust.
 Identities = 91/428 (21%), Positives = 171/428 (39%), Gaps = 77/428 (17%)

Query: 131  DPKIKVNAHIKRAVVHLHAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEA 190
            DP+    A + R + H     ++  A  DL    + DP+  ++ + RGQ     GQ E A
Sbjct: 857  DPQ-DWTAWLGRGMAHGQV-GNWDSAIQDLSRVLQQDPDHREALWHRGQALQQLGQTEAA 914

Query: 191  LRNLDKTIALNPNFHVARAQRHFVVHKMIVPG--------DRERVE-----------QSL 231
            L++L++ +  +P   +AR  R  ++  + V G        +++RV            Q+ 
Sbjct: 915  LQDLNRLLQRDPQHRMARLARGSLLLTLAVRGTDGPTNRAEQDRVSGTESLELGYYAQAE 974

Query: 232  KEFRNFVDTHSN--------VVEACTLFAQVLVDQEDFDGAEEYFNRSIRV-DPENASLY 282
             +F   +   +          +EA    AQV   + + +GA   ++R + +  P +  + 
Sbjct: 975  SDFDQVIQEEAQDGEQSRQLYLEAHLKRAQVRRLRHNLEGAIADWDRVLELASPGDPEVL 1034

Query: 283  VHRAM----LMLQARGNVDEAIKLIEKAISIDKSCMFAYETLGTIEVQRGRLEEAVKCFN 338
            V  A+    L  Q RG++  A+      I        A+    T+ +  G  E A+   +
Sbjct: 1035 VTEALLYRGLCRQERGDLAGALADFTALIQQQPQASQAFALRATVHLALGDQEMALADLD 1094

Query: 339  KALPLARDEAELSHIYSLRDAAIAQMKVCERYNIKKKVS-PRSQNITKNEKLAIKQLREN 397
            +AL L RD       + + +AA+A     +R ++ ++ + P        + LA+   +E+
Sbjct: 1095 QALSLDRD-------WGVANAALAYR---QRGDLHRQANCPELAIADYTQALALNP-QEH 1143

Query: 398  NDIIIRP--ADKGGKTVVMDKA--DYTQKMTSILNSNDYEIIPGDPTKTIEESEKYGNLE 453
            + ++ R    D  G+T   DKA  DYT+ +   L          DP       E+   L 
Sbjct: 1144 SALLHRALLWDGEGQT---DKAIEDYTRLLQLEL----------DP------QERVWVLN 1184

Query: 454  NESGQKHAASDFTKAFADLDEAEKV--------DPNVADSYYQRGQIYCLFGQYEEALRN 505
            N         DF+ A  D D+A  +        DP    +++ R       G ++ A ++
Sbjct: 1185 NRGWAYAQQGDFSAAIRDYDQAITLCTADASDRDPCHLKAHFNRALARTALGDWQRACQD 1244

Query: 506  LDKTIALN 513
                + + 
Sbjct: 1245 FQAALQMQ 1252



 Score = 43.9 bits (102), Expect = 0.24,   Method: Compositional matrix adjust.
 Identities = 26/96 (27%), Positives = 45/96 (46%)

Query: 419 YTQKMTSILNSNDYEIIPGDPTKTIEESEKYGNLENESGQKHAASDFTKAFADLDEAEKV 478
           Y+Q+ ++   S D      D T+ I+ +       N    ++   D+  A AD  +A  +
Sbjct: 332 YSQRGSARYKSGDLAGAIADYTQVIQLAGDARAYFNRGIARYRLEDYEGAVADYTQALGL 391

Query: 479 DPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNP 514
           +P  A +YY RG  Y    Q ++A+ +  + I LNP
Sbjct: 392 NPQWAVAYYNRGNAYRQLNQQQQAIEDYSRAIELNP 427


>gi|145478569|ref|XP_001425307.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
 gi|124392376|emb|CAK57909.1| unnamed protein product [Paramecium tetraurelia]
          Length = 1388

 Score = 79.3 bits (194), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 122/518 (23%), Positives = 228/518 (44%), Gaps = 86/518 (16%)

Query: 65  LSKAKRAFEHEDYLTAIRHCTEEIESTSSNHTKALARLLRATVYIFTSQSTKAIEDLTQL 124
           L++ +RAF+    +  I H          NH  A     R  +Y   +Q   A++D  ++
Sbjct: 483 LNQTERAFQDFHRILEINH----------NHLNAYHH--RGNLYKELNQDELALQDFNKI 530

Query: 125 VEDTSVDPKIKVNAHIKRAVVHLHAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLF 184
           ++   +DPKI +  + +  +      +D   A  DL+ A ++DP +  +  +RG +Y   
Sbjct: 531 IQ---IDPKIVIVYYNRAKIYQKQQKNDL--ALQDLNVAVELDPKITYTLVERGILYYNM 585

Query: 185 GQYEEALRNLDKTIALNPNFHVARAQRHFVVHKMIVPGDRERVEQSLKEFRNFVDTHSNV 244
            + ++AL + +K I +NP  + A    H  +  ++   D+   +Q+L  +    +   N 
Sbjct: 586 NEKDKALNDYNKAIEINPRCYDA----HVNLGNLLKSLDQN--QQALDSYNKAAELDQNN 639

Query: 245 VEACTLFAQVLVDQEDFDGAEEYFNRSIRVDPENASLYVHRAMLMLQARGNVDEAIKLIE 304
             A    A +     + + A   F+++I ++P++A  Y  RA L L      D AI    
Sbjct: 640 YLAYHNRAILWNKLNEKEKALADFDKAILLNPKSAVSYSSRASL-LSDMNQKDRAIDDFT 698

Query: 305 KAISIDKSCMFAYETLGTIEVQRGRLEEAVKCFNKALPLARDEAE--LSHIYSLRDAAIA 362
           K++ I+      +  LG +  Q+ ++ +A++ + +A+ +  ++A+  +S    L+D A  
Sbjct: 699 KSLQINPKQRIQFIFLGNLHKQKQQISQAIQDYTEAININPNQADYYVSRGNILQDPAKE 758

Query: 363 QMKVCERYNIKKKVSPRS-----------QNITKNEKLAIKQLRENNDIIIRPAD----- 406
             K  + YN   +++P S           ++I K E LAI     N  I I P +     
Sbjct: 759 HEKALQDYNKAIEIAPNSFISYYQRALLYRSIDKIE-LAIADC--NKSIEINPKNELPYI 815

Query: 407 -KGGKTVV--------MDK-----ADYTQKM-------TSILNSND-YEIIPG------D 438
            KG   ++        ++K     A+Y + +       +++L   D Y+++        D
Sbjct: 816 VKGNFDLLILGLIFKELNKPQDAIAEYNKALIINPTCTSALLKRGDAYDLMKNHQEALND 875

Query: 439 PTKTIEESEKYGNLENESGQKHAASDFT-------KAFADLDEAEKVDPNVADSYYQRGQ 491
            TK IE       + NESG   + +          +A  D ++A +V+P  A +YY R  
Sbjct: 876 FTKVIEI------IPNESGGYSSRAPLLMKLAQKEEALQDYNKAIEVNPGEAANYYNRAI 929

Query: 492 IYCLFGQYEEALRNLDKTIALNPNFHVARAQRHFVWTS 529
            Y    Q E AL++ +KTI LN N ++A   R  +  S
Sbjct: 930 YYNQVQQKELALQDYNKTIELNSNSYLAYNNRALLLQS 967



 Score = 75.5 bits (184), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 113/490 (23%), Positives = 209/490 (42%), Gaps = 89/490 (18%)

Query: 80  AIRHCTEEIESTSSNHTKALARLLRATVYIFTSQSTKAIEDLTQLVEDTSVDPKIKVNAH 139
           A++  T+ IE  + N T+   R  RAT+Y    Q+  A +D  +++E   ++PK   N +
Sbjct: 353 ALQDYTKTIE-INPNDTENYVR--RATLYKQLGQNDLATKDYDKILE---IEPK-NSNVY 405

Query: 140 IKRAVVHLHAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIA 199
            K+A+  L        A   L++A +++P  A+ Y +RG +  L  Q + A+ +  K I 
Sbjct: 406 YKKALF-LEELQQNELAITLLNQAIQLNPQDANLYLKRGDLNKLTNQLDMAVNDYSKAIE 464

Query: 200 LNPNFHVARAQRHFVVHKMIVPGDRERVEQSLKEFRNFVDTHSNVVEACTLFAQVLVDQE 259
           +NPN  VA   R  +  ++       + E++ ++F   ++ + N + A      +  +  
Sbjct: 465 INPNNEVALLNRALLFKQL------NQTERAFQDFHRILEINHNHLNAYHHRGNLYKELN 518

Query: 260 DFDGAEEYFNRSIRVDPENASLYVHRAML--------------------------MLQAR 293
             + A + FN+ I++DP+   +Y +RA +                           L  R
Sbjct: 519 QDELALQDFNKIIQIDPKIVIVYYNRAKIYQKQQKNDLALQDLNVAVELDPKITYTLVER 578

Query: 294 GNV-------DEAIKLIEKAISIDKSCMFAYETLGTIEVQRGRLEEAVKCFNKALPLARD 346
           G +       D+A+    KAI I+  C  A+  LG +     + ++A+  +NKA  L ++
Sbjct: 579 GILYYNMNEKDKALNDYNKAIEINPRCYDAHVNLGNLLKSLDQNQQALDSYNKAAELDQN 638

Query: 347 E-------AELSHIYSLRDAAIAQMKVCERYNIKKKVSPRSQ---------------NIT 384
                   A L +  + ++ A+A        N K  VS  S+               + T
Sbjct: 639 NYLAYHNRAILWNKLNEKEKALADFDKAILLNPKSAVSYSSRASLLSDMNQKDRAIDDFT 698

Query: 385 KNEKLAIKQLRENNDIIIRPADKGGKTVVMDKADYTQKMTSILNSNDYEIIPGDPTKTIE 444
           K+ ++  KQ  +   I +    K  + +     DYT+ +    N  DY +          
Sbjct: 699 KSLQINPKQRIQ--FIFLGNLHKQKQQISQAIQDYTEAININPNQADYYV---------- 746

Query: 445 ESEKYGNLENESGQKHAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALR 504
                GN+  +  ++H      KA  D ++A ++ PN   SYYQR  +Y    + E A+ 
Sbjct: 747 ---SRGNILQDPAKEH-----EKALQDYNKAIEIAPNSFISYYQRALLYRSIDKIELAIA 798

Query: 505 NLDKTIALNP 514
           + +K+I +NP
Sbjct: 799 DCNKSIEINP 808



 Score = 72.4 bits (176), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 112/479 (23%), Positives = 192/479 (40%), Gaps = 84/479 (17%)

Query: 147 LHAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHV 206
           LH       A  +++EA K++ N +++   + +I    G  ++AL  ++K I LNP    
Sbjct: 30  LHQNQVLDDALNEVNEALKINSNYSEALNLKAEILVKKGDTKQALEEVNKAIQLNPQLKE 89

Query: 207 ARAQRHFVVHKM----IVPGDRERV----EQSLK--EFRNFVDTHSNVV-EACTLFAQVL 255
           A   R  +  K     +   D E       QS K   F+  +   S    EA  +F + +
Sbjct: 90  AYYNRALIFRKNKAYNLALNDAEMYYQLDPQSTKTINFKGIIMKESGSQQEALAVFQKTI 149

Query: 256 -VDQEDF----------------DGAEEYFNRSIRVDPENASLYVHRAMLMLQARGNVDE 298
            +DQ ++                + A   FN++I + P ++  Y  RA L L      +E
Sbjct: 150 ELDQMNYPAHYQSGLILRALKKEEDALLEFNKAIEIRPTSSDAYFERAEL-LTDMNKKEE 208

Query: 299 AIKLIEKAISIDKSCMFAYETLGTIEVQRGRLEEAVKCFNKALPLARDEAELSHIYSLRD 358
           A+    K I +D      YE  G +  Q  + EEA+  +N A+ L     +  +   L  
Sbjct: 209 ALVDYNKTIELDPKKAQTYECRGILLKQLEKYEEALSDYNMAIKLNPKVYKWFYFQGLLF 268

Query: 359 AAIAQM-KVCERYNIKKKVSPRSQNITKNEKLAIKQLRENNDII--------IRPADKG- 408
             + +  K  E YN    V+P+     KN  +  K++ +N+  +        + P D+  
Sbjct: 269 KVLNEKEKALEEYNQAISVNPKFAKAYKNRAILYKEIDQNDKALSDYTKILELNPKDEKI 328

Query: 409 ----GKTVVMDKADYTQKMTSILNSNDYEIIPGDPTKTIE----ESEKY---GNLENESG 457
               GK +V+ K +  +++         E+   D TKTIE    ++E Y     L  + G
Sbjct: 329 YQFRGKKLVLIKGNLLKQLGQ------NELALQDYTKTIEINPNDTENYVRRATLYKQLG 382

Query: 458 QKHAAS-DFTK---------------------------AFADLDEAEKVDPNVADSYYQR 489
           Q   A+ D+ K                           A   L++A +++P  A+ Y +R
Sbjct: 383 QNDLATKDYDKILEIEPKNSNVYYKKALFLEELQQNELAITLLNQAIQLNPQDANLYLKR 442

Query: 490 GQIYCLFGQYEEALRNLDKTIALNPNFHVARAQRHFVWTSTLAELMAFSDEFMIPKITY 548
           G +  L  Q + A+ +  K I +NPN  VA   R  ++        AF D   I +I +
Sbjct: 443 GDLNKLTNQLDMAVNDYSKAIEINPNNEVALLNRALLFKQLNQTERAFQDFHRILEINH 501



 Score = 72.0 bits (175), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 102/447 (22%), Positives = 204/447 (45%), Gaps = 61/447 (13%)

Query: 138 AHIKRAVVHLHAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKT 197
           AH +  ++ L A      A  + ++A ++ P  +D+Y++R ++     + EEAL + +KT
Sbjct: 158 AHYQSGLI-LRALKKEEDALLEFNKAIEIRPTSSDAYFERAELLTDMNKKEEALVDYNKT 216

Query: 198 IALNPNFHVARAQRHFVVHKMIVPGDRERVEQSLKEFRNFVDTHSNVVEAC---TLFAQV 254
           I L+P     +AQ +    + I+    E+ E++L ++   +  +  V +      L  +V
Sbjct: 217 IELDP----KKAQTYEC--RGILLKQLEKYEEALSDYNMAIKLNPKVYKWFYFQGLLFKV 270

Query: 255 LVDQEDFDGAEEYFNRSIRVDPENASLYVHRAMLMLQARGNVDEAI----KLIEKAISID 310
           L ++E    A E +N++I V+P+ A  Y +RA+L  +   N D+A+    K++E     +
Sbjct: 271 LNEKE---KALEEYNQAISVNPKFAKAYKNRAILYKEIDQN-DKALSDYTKILELNPKDE 326

Query: 311 KSCMFAYETL----GTIEVQRGRLEEAVKCFNKALPLARDEAELSHIYSLRDAAIAQMK- 365
           K   F  + L    G +  Q G+ E A++ + K + +  ++ E    Y  R     Q+  
Sbjct: 327 KIYQFRGKKLVLIKGNLLKQLGQNELALQDYTKTIEINPNDTE---NYVRRATLYKQLGQ 383

Query: 366 ---VCERYNIKKKVSPRSQNITKNEKLAIKQLREN--------NDIIIRPADKGGKTVVM 414
                + Y+   ++ P++ N+   + L +++L++N          I + P D     + +
Sbjct: 384 NDLATKDYDKILEIEPKNSNVYYKKALFLEELQQNELAITLLNQAIQLNPQDAN---LYL 440

Query: 415 DKADYTQKMTSILNS--NDY----EIIPGDPTKTIEESEKYGNLENESGQKHAASDFTKA 468
            + D   K+T+ L+   NDY    EI P +    +  +  +  L          +   +A
Sbjct: 441 KRGDLN-KLTNQLDMAVNDYSKAIEINPNNEVALLNRALLFKQL----------NQTERA 489

Query: 469 FADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQRHFVWT 528
           F D     +++ N  ++Y+ RG +Y    Q E AL++ +K I ++P   +    R  ++ 
Sbjct: 490 FQDFHRILEINHNHLNAYHHRGNLYKELNQDELALQDFNKIIQIDPKIVIVYYNRAKIYQ 549

Query: 529 STLAELMAFSDEFMI----PKITYYIL 551
                 +A  D  +     PKITY ++
Sbjct: 550 KQQKNDLALQDLNVAVELDPKITYTLV 576



 Score = 44.3 bits (103), Expect = 0.16,   Method: Compositional matrix adjust.
 Identities = 36/125 (28%), Positives = 60/125 (48%), Gaps = 5/125 (4%)

Query: 94  NHTKALARLLRATVYIFTSQSTKAIEDLTQLVEDTSVDPKIKVNAHIKRAVVHLHAASDF 153
           N T   A L R   Y       +A+ D T+++E   + P  +   +  RA + +  A   
Sbjct: 849 NPTCTSALLKRGDAYDLMKNHQEALNDFTKVIE---IIPN-ESGGYSSRAPLLMKLAQK- 903

Query: 154 TKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQRHF 213
            +A  D ++A +V+P  A +YY R   Y    Q E AL++ +KTI LN N ++A   R  
Sbjct: 904 EEALQDYNKAIEVNPGEAANYYNRAIYYNQVQQKELALQDYNKTIELNSNSYLAYNNRAL 963

Query: 214 VVHKM 218
           ++  +
Sbjct: 964 LLQSI 968


>gi|386001554|ref|YP_005919853.1| putative membrane protein, containing TPR repeats [Methanosaeta
           harundinacea 6Ac]
 gi|357209610|gb|AET64230.1| putative membrane protein, containing TPR repeats [Methanosaeta
           harundinacea 6Ac]
          Length = 463

 Score = 79.3 bits (194), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 79/381 (20%), Positives = 158/381 (41%), Gaps = 52/381 (13%)

Query: 145 VHLHAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNF 204
           V L     + +A A  D A ++DP  A ++  +G      G+ EEAL   ++++ ++P++
Sbjct: 40  VALSELGRYEEAVASYDNALELDPEYALAWNNKGIALSALGRNEEALACYNRSLEIDPDY 99

Query: 205 HVARAQRHFVVHKMIVPGDRERVEQSLKEFRNFVDTHSNVVEACTLFAQVLVDQEDFDGA 264
             A   R  V+  +       R +++L+ +   ++       A +    V   + D++ +
Sbjct: 100 APAWNNRGVVLEAL------GRGDEALESYDRALEVDPAYALAWSNQGGVFYSRGDYNRS 153

Query: 265 EEYFNRSIRVDPENASLYVHRAMLMLQARGNVDEAIKLIEKAISIDKSCMFAYETLGTIE 324
            E + R++ +DP +   + +    +  A G  + +I+  ++A+ ID     A+   G   
Sbjct: 154 IECYERALEIDPRSREAWNNLGRSLFAA-GEYERSIEGYDEALKIDPLYATAWNNKGIAL 212

Query: 325 VQRGRLEEAVKCFNKALPLARDEAELSHIYSLRDAAIA------QMKVCERYNIKKKVSP 378
              GR +EA+ C+ +AL +     E SH+ +L +  IA      Q +  E Y+   KV P
Sbjct: 213 GTLGRHQEALDCYEEALKI-----EPSHVMALYNKGIALGLLGRQEEAVECYDAVLKVDP 267

Query: 379 RSQNITKNEKLAIKQLRENNDIIIRPADKGGKTVVMDKADYTQKMTSILNSNDYEIIPGD 438
                  N  +A+  L                      A Y + +         ++ PG 
Sbjct: 268 SYPPAWYNRGVALGLLGRQEQA---------------AASYDEAL---------KLDPGY 303

Query: 439 PTKTIEESEKYGNLENESGQKHAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQ 498
                      G+L     Q+ A   + +A        ++DP  + ++Y +G  +   G+
Sbjct: 304 AQAWNNRGIALGSLGR---QEEALQSYQRAL-------EIDPAYSQAWYNQGVAFSALGR 353

Query: 499 YEEALRNLDKTIALNPNFHVA 519
           Y+EA+ + D+ + L+P    A
Sbjct: 354 YQEAISSYDRALELDPELSEA 374



 Score = 73.2 bits (178), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 76/363 (20%), Positives = 152/363 (41%), Gaps = 72/363 (19%)

Query: 173 SYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQRHFVVHKMIVPGDRERVEQSLK 232
           ++Y +G      G+YEEA+ + D  + L+P + +A   +   +  +       R E++L 
Sbjct: 34  AWYNKGVALSELGRYEEAVASYDNALELDPEYALAWNNKGIALSAL------GRNEEAL- 86

Query: 233 EFRNFVDTHSNVVEACTLFAQVLVDQEDFDGAEEYFNRSIRVDPENASLYVHRAMLMLQA 292
                         AC                   +NRS+ +DP+ A  + +R + +L+A
Sbjct: 87  --------------AC-------------------YNRSLEIDPDYAPAWNNRGV-VLEA 112

Query: 293 RGNVDEAIKLIEKAISIDKSCMFAYETLGTIEVQRGRLEEAVKCFNKALPL-ARDEAELS 351
            G  DEA++  ++A+ +D +   A+   G +   RG    +++C+ +AL +  R     +
Sbjct: 113 LGRGDEALESYDRALEVDPAYALAWSNQGGVFYSRGDYNRSIECYERALEIDPRSREAWN 172

Query: 352 HIYSLRDAAIAQMKVCERYNIKKKVSPRSQNITKNEKLAIKQLRENNDII--------IR 403
           ++     AA    +  E Y+   K+ P       N+ +A+  L  + + +        I 
Sbjct: 173 NLGRSLFAAGEYERSIEGYDEALKIDPLYATAWNNKGIALGTLGRHQEALDCYEEALKIE 232

Query: 404 PA------DKGGKTVVMDKA-DYTQKMTSILNSNDYEIIPGDPTKTIEESEKYGNLENES 456
           P+      +KG    ++ +  +  +   ++L     ++ P  P          G L    
Sbjct: 233 PSHVMALYNKGIALGLLGRQEEAVECYDAVL-----KVDPSYPPAWYNRGVALGLLGR-- 285

Query: 457 GQKHAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNF 516
            Q+ AA+ +       DEA K+DP  A ++  RG      G+ EEAL++  + + ++P +
Sbjct: 286 -QEQAAASY-------DEALKLDPGYAQAWNNRGIALGSLGRQEEALQSYQRALEIDPAY 337

Query: 517 HVA 519
             A
Sbjct: 338 SQA 340



 Score = 59.7 bits (143), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 66/295 (22%), Positives = 139/295 (47%), Gaps = 27/295 (9%)

Query: 78  LTAIRHCTEEIES----TSSNHTKALARLLRATVYIFTSQSTKAIEDLTQLVEDTSVDPK 133
           L A+    E +ES       +   ALA   +  V+       ++IE   + +E   +DP+
Sbjct: 110 LEALGRGDEALESYDRALEVDPAYALAWSNQGGVFYSRGDYNRSIECYERALE---IDPR 166

Query: 134 IK-VNAHIKRAVVHLHAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALR 192
            +    ++ R+   L AA ++ ++    DEA K+DP  A ++  +G      G+++EAL 
Sbjct: 167 SREAWNNLGRS---LFAAGEYERSIEGYDEALKIDPLYATAWNNKGIALGTLGRHQEALD 223

Query: 193 NLDKTIALNPNFHVARAQRHFVVHKMIVPGDRERVEQSLKEFRNFVDTHSNVVEAC---T 249
             ++ + + P+  +A      + +K I  G   R E++++ +   +    +   A     
Sbjct: 224 CYEEALKIEPSHVMA------LYNKGIALGLLGRQEEAVECYDAVLKVDPSYPPAWYNRG 277

Query: 250 LFAQVLVDQEDFDGAEEYFNRSIRVDPENASLYVHRAMLMLQARGNVDEAIKLIEKAISI 309
           +   +L  QE    A   ++ ++++DP  A  + +R  + L + G  +EA++  ++A+ I
Sbjct: 278 VALGLLGRQEQ---AAASYDEALKLDPGYAQAWNNRG-IALGSLGRQEEALQSYQRALEI 333

Query: 310 DKSCMFAYETLGTIEVQRGRLEEAVKCFNKALPLARDEAELSHIYSLRDAAIAQM 364
           D +   A+   G      GR +EA+  +++AL L   + ELS  ++ +  A++ +
Sbjct: 334 DPAYSQAWYNQGVAFSALGRYQEAISSYDRALEL---DPELSEAWNNKGIALSAL 385



 Score = 56.2 bits (134), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 42/181 (23%), Positives = 83/181 (45%), Gaps = 7/181 (3%)

Query: 161 DEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQRHFVVHKMIV 220
           +EA K++P+   + Y +G    L G+ EEA+   D  + ++P++  A   R   +  +  
Sbjct: 226 EEALKIEPSHVMALYNKGIALGLLGRQEEAVECYDAVLKVDPSYPPAWYNRGVALGLL-- 283

Query: 221 PGDRERVEQSLKEFRNFVDTHSNVVEACTLFAQVLVDQEDFDGAEEYFNRSIRVDPENAS 280
            G +E+   S  E       ++       +    L  QE+   A + + R++ +DP  + 
Sbjct: 284 -GRQEQAAASYDEALKLDPGYAQAWNNRGIALGSLGRQEE---ALQSYQRALEIDPAYSQ 339

Query: 281 LYVHRAMLMLQARGNVDEAIKLIEKAISIDKSCMFAYETLGTIEVQRGRLEEAVKCFNKA 340
            + ++ +    A G   EAI   ++A+ +D     A+   G      GR +EA++C+ +A
Sbjct: 340 AWYNQGV-AFSALGRYQEAISSYDRALELDPELSEAWNNKGIALSALGRHQEAIECYERA 398

Query: 341 L 341
           L
Sbjct: 399 L 399


>gi|168012472|ref|XP_001758926.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162690063|gb|EDQ76432.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 678

 Score = 79.3 bits (194), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 82/375 (21%), Positives = 165/375 (44%), Gaps = 64/375 (17%)

Query: 152 DFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQR 211
           D+  A A+L++A+ +DPN       RG + C    YE AL +L +   L PN        
Sbjct: 171 DYAGALAELNKADSLDPNNIFILQLRGDVKCWMNDYEGALEDLTRADHLRPN-------D 223

Query: 212 HFVVHKMIVPGDRERVEQSLKEFRNFVDT-------HSNVVEACTLFAQVLVDQEDFDGA 264
            F +  + +       + SL++FR  +           N +    L  +V     D+ GA
Sbjct: 224 PFTLKALGI------AKSSLRDFRGALQALNAANRLQPNDMWTLRLRGRVKRTLRDYTGA 277

Query: 265 EEYFNRSIRVDPENASLYVHRAMLMLQARGNVDEAIKLIEKAISIDKSCMFAYETLGTIE 324
            +  + + R++P +  +   R ++    R + + A+  ++KA  ++ +  +        +
Sbjct: 278 LKDLDAADRIEPNDLEVLRGRGIVKFNLR-DYEGALIDLDKAHRMEPTSSYILRYRADTK 336

Query: 325 VQRGRLEEAVKCFNKALPLARDEAELSHIYSLRDAAIAQMKVCERYNIKKKVSPRSQNIT 384
           ++ G+L++A+    KA+ L   ++  +H+Y +R     ++K+      KK +S    ++ 
Sbjct: 337 LRAGKLDQALLDVKKAMEL---DSACAHLYRIR----GEVKLR-----KKDISAAHADLN 384

Query: 385 KNEKLAIKQLRENNDIIIRPADKGGKTVVMDKADYTQKMTSILNSNDYEIIPGDPTKTIE 444
           K       +++ NN I +R                  +   +    +YE    D  K ++
Sbjct: 385 K-----ALEMQSNNAIALRA-----------------RGELLYELGEYE----DALKNLQ 418

Query: 445 ESEKYGNLENES-----GQKHAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQY 499
            +++ G  + ++       K+A +DF  A +DL++A+K+DPN       RG +    G Y
Sbjct: 419 SADRAGRKDGDTLIVLAKIKYALNDFRGALSDLNKADKLDPNNHILLRSRGNVKRKLGNY 478

Query: 500 EEALRNLDKTIALNP 514
            +AL +L++   LNP
Sbjct: 479 RDALSDLNRANELNP 493



 Score = 44.7 bits (104), Expect = 0.13,   Method: Compositional matrix adjust.
 Identities = 21/55 (38%), Positives = 33/55 (60%)

Query: 148 HAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNP 202
           +A +DF  A +DL++A+K+DPN       RG +    G Y +AL +L++   LNP
Sbjct: 439 YALNDFRGALSDLNKADKLDPNNHILLRSRGNVKRKLGNYRDALSDLNRANELNP 493



 Score = 40.8 bits (94), Expect = 1.8,   Method: Compositional matrix adjust.
 Identities = 29/113 (25%), Positives = 51/113 (45%), Gaps = 5/113 (4%)

Query: 408 GGKTVVMDKADYTQKMTSILNSNDYEIIPGDPTKTIE-----ESEKYGNLENESGQKHAA 462
           GGK+   ++ D +    S+  S+++        K        +S +  +L ++   K   
Sbjct: 110 GGKSRESEEGDESTSNRSVSGSHNWSHFKHRVKKLFRVPVGCKSVRAFSLRSKGVMKFLV 169

Query: 463 SDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPN 515
            D+  A A+L++A+ +DPN       RG + C    YE AL +L +   L PN
Sbjct: 170 KDYAGALAELNKADSLDPNNIFILQLRGDVKCWMNDYEGALEDLTRADHLRPN 222


>gi|260944208|ref|XP_002616402.1| hypothetical protein CLUG_03643 [Clavispora lusitaniae ATCC 42720]
 gi|238850051|gb|EEQ39515.1| hypothetical protein CLUG_03643 [Clavispora lusitaniae ATCC 42720]
          Length = 595

 Score = 79.3 bits (194), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 75/276 (27%), Positives = 125/276 (45%), Gaps = 14/276 (5%)

Query: 108 YIFTSQSTKAIEDLTQLVEDTSVDPKIKVNAHIKRAVVHLHAASDFTKAFADLDEAEKVD 167
           Y  T Q  K I +   ++   ++D K +   ++ RA+++   AS F +A AD + A+K+ 
Sbjct: 319 YAATMQFLKNIPNEAAVLIQKAIDLKPRARTYVVRALINADKAS-FAEAIADFETAQKIS 377

Query: 168 PNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQRHFVVHKMIVPGDRERV 227
           P+ AD YY  GQ+Y L     +A  N  KT  LNP    A  Q   + +K    G+ E  
Sbjct: 378 PDCADVYYHLGQLYYLTSDLTKAEANFLKTKELNPENLYAYIQLACITYKK---GNFEEA 434

Query: 228 EQSLKEFRNFVDTHSNVVEACTLFAQVLVDQEDFDGAEEYFNRSIRVDPENASLYVHRAM 287
           + + KE R    T   V+     + ++L D  D   A + +  + R+     +  V    
Sbjct: 435 QAAFKEARLKFATSPEVL---NYYGEILADHGDIKEAIKQYEIAARLQEALKTFNVGAVP 491

Query: 288 LM----LQARGNVD---EAIKLIEKAISIDKSCMFAYETLGTIEVQRGRLEEAVKCFNKA 340
           L+    L +R   D   EA +L+ KA  +D     A  +L  +++Q  + EEA+  F + 
Sbjct: 492 LINKASLLSREGPDRLAEAEELLTKACELDPKSETARVSLAQVKLQTDKPEEAISLFEEG 551

Query: 341 LPLARDEAELSHIYSLRDAAIAQMKVCERYNIKKKV 376
             LAR   E     S  +A   Q+++     + KK+
Sbjct: 552 SRLARTIEEKIQATSFAEATKMQVRIKADPILSKKI 587



 Score = 45.8 bits (107), Expect = 0.058,   Method: Compositional matrix adjust.
 Identities = 22/52 (42%), Positives = 30/52 (57%)

Query: 463 SDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNP 514
           + F +A AD + A+K+ P+ AD YY  GQ+Y L     +A  N  KT  LNP
Sbjct: 361 ASFAEAIADFETAQKISPDCADVYYHLGQLYYLTSDLTKAEANFLKTKELNP 412


>gi|254412886|ref|ZP_05026658.1| tetratricopeptide repeat domain protein [Coleofasciculus
           chthonoplastes PCC 7420]
 gi|196180050|gb|EDX75042.1| tetratricopeptide repeat domain protein [Coleofasciculus
           chthonoplastes PCC 7420]
          Length = 456

 Score = 79.3 bits (194), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 88/406 (21%), Positives = 177/406 (43%), Gaps = 55/406 (13%)

Query: 109 IFTSQSTKAIEDLTQLVEDTSVDPKIKVNAHIKRAVVHLHAASDFTKAFADLDEAEKVDP 168
           +  S ++K  E+L+  +ED   D    ++  I           D+  A A L++A +++P
Sbjct: 1   MVVSGNSKLSENLSAGMEDVQSDADTWLSQGIAS-----FQQGDYRHAIAALNQALQINP 55

Query: 169 NVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQRHFVVHKMIVPGDRERVE 228
           ++A +Y+ RG  +   G    A+ + D+ + L+P    A + R  ++  +    DR    
Sbjct: 56  DLAQAYHYRGMSHYCQGDALGAIGDFDEVLRLDPQNAQAYSDRGLILATL---NDRWG-- 110

Query: 229 QSLKEFRNFVDTHSNVVEACTLFAQVLVDQEDFDGAEEYFNRSIRVDPENASLYVHRAML 288
            +++++   +   SN  +     + + +  ED+DGA    ++ IR++P  A  Y++R + 
Sbjct: 111 -AMQDYNQALQLDSNYAKGYLNRSMLRLALEDYDGAIADCDQVIRMNPNLAEGYLNRGIA 169

Query: 289 MLQARGNVDEAIKLIEKAISIDKSCMFAYETLGTIEVQRGRLEEAVKCFNKALPLARDEA 348
             +     D AI   ++A++I+ +   AY   G   +  G  +EA+  FN  L L  ++A
Sbjct: 170 RFEVEAYQD-AIGDCDRALAINSNLAAAYFNRGMNHIALGAYQEAIADFNHVLELNPNDA 228

Query: 349 ELSHIYSLRDAAIAQMKVCERYNIKKKVSPRSQNITKNEKLAIKQLRENNDIIIRPADKG 408
           +                   R  ++ ++     +I            E+ D  +R     
Sbjct: 229 Q---------------AYLNRGYVRLQLGENWSSI------------EDFDQAMRLEPVA 261

Query: 409 GKTVVMDKADYTQKMTSILNSNDYEIIPGDPTKTIEESEKYGNLENESGQKHAASDFTKA 468
            K        + Q++ + LN  + + +  D +K I+     GNL  + G      D+  A
Sbjct: 262 AKA-------FFQQIANTLNQ-EPDTVEDDESKLIQGLMVRGNLRYQLG------DYPAA 307

Query: 469 FADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLD--KTIAL 512
               ++  ++DPN  ++Y QR  +    G Y+ A+ +LD  KT++L
Sbjct: 308 LNAYNQVLELDPNYTEAYNQRSTVRSAMGDYQGAIADLDMVKTLSL 353



 Score = 53.1 bits (126), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 55/277 (19%), Positives = 109/277 (39%), Gaps = 44/277 (15%)

Query: 105 ATVYIFTSQSTKAIEDLTQLVEDTSVDPKIKVN-----AHIKRAVVHLHAASDFTKAFAD 159
           A  Y+  S    A+ED    + D   D  I++N      ++ R +      + +  A  D
Sbjct: 126 AKGYLNRSMLRLALEDYDGAIAD--CDQVIRMNPNLAEGYLNRGIARFEVEA-YQDAIGD 182

Query: 160 LDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQRHFV----- 214
            D A  ++ N+A +Y+ RG  +   G Y+EA+ + +  + LNPN   A   R +V     
Sbjct: 183 CDRALAINSNLAAAYFNRGMNHIALGAYQEAIADFNHVLELNPNDAQAYLNRGYVRLQLG 242

Query: 215 --------------VHKMIVPGDRERVEQSLKEFRNFV-DTHSNVVEACTLFAQVLVDQE 259
                         +  +      +++  +L +  + V D  S +++   +   +     
Sbjct: 243 ENWSSIEDFDQAMRLEPVAAKAFFQQIANTLNQEPDTVEDDESKLIQGLMVRGNLRYQLG 302

Query: 260 DFDGAEEYFNRSIRVDPENASLYVHRAMLMLQARGNVDEAIKLIEK-------------- 305
           D+  A   +N+ + +DP     Y  R+ +   A G+   AI  ++               
Sbjct: 303 DYPAALNAYNQVLELDPNYTEAYNQRSTVR-SAMGDYQGAIADLDMVKTLSLATPLSPEP 361

Query: 306 -AISIDKSCMFAYETLGTIEVQRGRLEEAVKCFNKAL 341
            +++ DK     Y  +G  ++ +G    A++ FN  L
Sbjct: 362 VSVATDKPTPQEYHKIGVHKLNQGDFHGAIEAFNYVL 398



 Score = 43.9 bits (102), Expect = 0.23,   Method: Compositional matrix adjust.
 Identities = 22/72 (30%), Positives = 36/72 (50%), Gaps = 7/72 (9%)

Query: 465 FTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQRH 524
           +  A  D D A  ++ N+A +Y+ RG  +   G Y+EA+ + +  + LNPN   A   R 
Sbjct: 176 YQDAIGDCDRALAINSNLAAAYFNRGMNHIALGAYQEAIADFNHVLELNPNDAQAYLNRG 235

Query: 525 FV-------WTS 529
           +V       W+S
Sbjct: 236 YVRLQLGENWSS 247



 Score = 41.6 bits (96), Expect = 1.0,   Method: Compositional matrix adjust.
 Identities = 22/70 (31%), Positives = 37/70 (52%)

Query: 454 NESGQKHAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALN 513
           N S  + A  D+  A AD D+  +++PN+A+ Y  RG        Y++A+ + D+ +A+N
Sbjct: 131 NRSMLRLALEDYDGAIADCDQVIRMNPNLAEGYLNRGIARFEVEAYQDAIGDCDRALAIN 190

Query: 514 PNFHVARAQR 523
            N   A   R
Sbjct: 191 SNLAAAYFNR 200


>gi|145515088|ref|XP_001443449.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
 gi|124410827|emb|CAK76052.1| unnamed protein product [Paramecium tetraurelia]
          Length = 736

 Score = 79.3 bits (194), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 59/201 (29%), Positives = 104/201 (51%), Gaps = 23/201 (11%)

Query: 155 KAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQRHFV 214
           KAF D  +A  +DP   ++Y+ R  +Y    +Y+EAL +LDK I L+P    A   R  +
Sbjct: 69  KAFNDYQQAIDLDPQFINAYFNRALLYQKQKKYQEALNDLDKIIELDPKNAQAFNSRGNI 128

Query: 215 VHKMIVPGDRERVEQSLKEFR-------NFVDTHSN-----VVEACTLFAQVLVDQEDFD 262
            H      D E+ ++++ +F        N  +T++N     V+    LF+   +DQE  +
Sbjct: 129 YH------DLEKDKEAMIDFNTSLLLDPNNSNTYNNRGQFTVITLANLFSDQGLDQEALN 182

Query: 263 GAEEYFNRSIRVDPENASLYVHRAMLMLQARGNVDEAIKLIEKAISIDKSCMFAYETLGT 322
                +N+SI +DP++++ Y +R +L  +   N  EA+    KAI ++   + AY + G 
Sbjct: 183 D----YNKSILLDPQSSNKYCNRGVLFRKQERN-QEALNDFNKAIELNNQNVEAYNSRGI 237

Query: 323 IEVQRGRLEEAVKCFNKALPL 343
           +  +  +++EA K +NKA  L
Sbjct: 238 LFKELNKMDEAFKDYNKATDL 258



 Score = 43.9 bits (102), Expect = 0.23,   Method: Compositional matrix adjust.
 Identities = 73/324 (22%), Positives = 138/324 (42%), Gaps = 36/324 (11%)

Query: 213 FVVHKMIVPGDRERVEQSLKEFRNFVDTHSNVVEACTLFAQVLVDQEDFDGAEEYFN--- 269
           F+    I+  +  ++E +LK F   ++ ++   +     A ++   E     E+ FN   
Sbjct: 19  FIFILGILLDELGKIEDALKSFNKTIELNAKDAKLFKCRADLM---EKMGQTEKAFNDYQ 75

Query: 270 RSIRVDPENASLYVHRAMLMLQARGNVDEAIKLIEKAISIDKSCMFAYETLGTIEVQRGR 329
           ++I +DP+  + Y +RA+L  Q +    EA+  ++K I +D     A+ + G I     +
Sbjct: 76  QAIDLDPQFINAYFNRALLY-QKQKKYQEALNDLDKIIELDPKNAQAFNSRGNIYHDLEK 134

Query: 330 LEEAVKCFNKALPLARDEAE------------LSHIYSLRDAAIAQMKVCERYNIKKKVS 377
            +EA+  FN +L L  + +             L++++S  D  + Q +    YN    + 
Sbjct: 135 DKEAMIDFNTSLLLDPNNSNTYNNRGQFTVITLANLFS--DQGLDQ-EALNDYNKSILLD 191

Query: 378 PRSQNITKNEKLAIKQLRENNDIIIRPADKGGKTVVMDKADYTQKMTSILNSNDYEIIPG 437
           P+S N   N  +  ++ +E N   +   +K  +    +   Y  +       N  +    
Sbjct: 192 PQSSNKYCNRGVLFRK-QERNQEALNDFNKAIELNNQNVEAYNSRGILFKELNKMDEAFK 250

Query: 438 DPTKTIEESEKY-------GNLENESGQKHAASDFTKAFADLDEAEKVDPNVADSYYQRG 490
           D  K  + + KY       GNL    GQK       KA  D     + +   +D+Y  RG
Sbjct: 251 DYNKATDLNPKYVNSLYNRGNLYYNLGQKE------KALKDYMLVLERNQAHSDTYNSRG 304

Query: 491 QIYCLFGQYEEALRNLDKTIALNP 514
            +Y   G+ E A+++ +K I +NP
Sbjct: 305 NLYMNDGKIELAIKDYNKAIEINP 328


>gi|158339013|ref|YP_001520190.1| pentapeptide repeat-containing serine/threonine kinase
           [Acaryochloris marina MBIC11017]
 gi|158309254|gb|ABW30871.1| serine/threonine kinase with pentapeptide repeats [Acaryochloris
           marina MBIC11017]
          Length = 699

 Score = 79.3 bits (194), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 69/279 (24%), Positives = 125/279 (44%), Gaps = 21/279 (7%)

Query: 65  LSKAKRAFEHEDYLTAIRHCTEEIESTSSNHTKALARLLRATVYIFTSQSTKAIEDLTQL 124
           L +  + F   DY  A+R     I+    N          A  +  +  + + + DL   
Sbjct: 415 LQQGDQKFAQGDYQRALREYAAAIQKDPEN----------AEAHFNSGITKRRLNDLKGA 464

Query: 125 VEDTSVDPKIK---VNAHIKRAVVHLHAASDFTKAFADLDEAEKVDPNVADSYYQRGQIY 181
           +   +   ++K   V+A+  R +V      D   A AD  EA +++P    +Y  RG IY
Sbjct: 465 IAHYTTAIRLKPTSVDAYNNRGLVR-SELGDKLAAIADFTEAIRLNPQHVQAYNNRGTIY 523

Query: 182 CLFGQYEEALRNLDKTIALNPNFHVARAQRHFVVHKMIVPGDRERVEQSLKEFRNFVDTH 241
              G+ + A+ +  + + ++  ++ A    +F  ++ IV  D    + ++ ++   +  +
Sbjct: 524 SEVGKKQAAIADYSQAVQIDAQYYEA----YF--NRGIVQSDLGNTKAAISDYSQVIRLN 577

Query: 242 SNVVEACTLFAQVLVDQEDFDGAEEYFNRSIRVDPENASLYVHRAMLMLQARGNVDEAIK 301
           SN  +A        V+  +   A   + ++IRVDP+ A  Y +R    L A GN   AI 
Sbjct: 578 SNYAQAYNNRGIAYVNLGNLKKAIADYTQAIRVDPKYARAYTNRGTAQL-ALGNKQAAIA 636

Query: 302 LIEKAISIDKSCMFAYETLGTIEVQRGRLEEAVKCFNKA 340
              +AI ID +   AYE  GT++ Q G+ +EA++   KA
Sbjct: 637 DYTQAIDIDSTYAKAYENRGTVKGQLGKKQEAIQDLQKA 675



 Score = 44.3 bits (103), Expect = 0.17,   Method: Compositional matrix adjust.
 Identities = 64/249 (25%), Positives = 103/249 (41%), Gaps = 34/249 (13%)

Query: 260 DFDGAEEYFNRSIRVDPENASLYVHRAMLMLQARGNVDEAIKLIEKAISIDKSCMFAYET 319
           D  GA  ++  +IR+ P +   Y +R ++  +  G+   AI    +AI ++   + AY  
Sbjct: 460 DLKGAIAHYTTAIRLKPTSVDAYNNRGLVRSEL-GDKLAAIADFTEAIRLNPQHVQAYNN 518

Query: 320 LGTIEVQRGRLEEAVKCFNKALPLARDEAELSHIYSLRDAAIAQMKVCERYNIKKKVSPR 379
            GTI  + G+ + A+  +++A+ +   +A+    Y  R   I Q  +    N K  +S  
Sbjct: 519 RGTIYSEVGKKQAAIADYSQAVQI---DAQYYEAYFNR--GIVQSDLG---NTKAAISDY 570

Query: 380 SQNITKNEKLAIKQLRENNDIIIRPADKGGKTVVMDKADYTQKMTSILNSNDYEIIPGDP 439
           SQ I  N   A  Q   N  I         K +    ADYTQ +              DP
Sbjct: 571 SQVIRLNSNYA--QAYNNRGIAYVNLGNLKKAI----ADYTQAIRV------------DP 612

Query: 440 TKTIEESEKYGNLENESGQKHAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQY 499
            K        G  +   G K AA       AD  +A  +D   A +Y  RG +    G+ 
Sbjct: 613 -KYARAYTNRGTAQLALGNKQAA------IADYTQAIDIDSTYAKAYENRGTVKGQLGKK 665

Query: 500 EEALRNLDK 508
           +EA+++L K
Sbjct: 666 QEAIQDLQK 674


>gi|300122485|emb|CBK23055.2| Tom70 [Blastocystis hominis]
          Length = 526

 Score = 79.3 bits (194), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 92/377 (24%), Positives = 161/377 (42%), Gaps = 50/377 (13%)

Query: 6   GAQHAKEEISKR-----SFFKPSKQFIKTYLKSFPNDPILQPDGLSNGVE-----LTNGD 55
            A+H + EI +R     +F  PS QF+  Y  +  ++   Q + L    E     +  G+
Sbjct: 153 AARHCQAEIDRRYASSFAFSLPSAQFMTLYFLTLRSERAAQYNTLKLSEEELSKRIEAGE 212

Query: 56  TNESHELDL------LSKAKRAFE--HEDYLTAIRHCTEEIESTSSNHTKALARLLRATV 107
             E    DL      L K+K AFE  + D+  A +      E+  S+ + AL  L +AT 
Sbjct: 213 AAEPSLGDLYLMRGGLRKSKGAFEAAYADFCEAAKE-----EAKCSDRSHAL--LEKATF 265

Query: 108 YIFTSQSTKAIEDLTQLVEDTSVDPKIKVNAHIKRAVVHLHAASDFTKAFADLDEAEKVD 167
              +    +A +    L E    +    VN  +K A   L    + T+A    DEA    
Sbjct: 266 LTLSGDQREARKIFEALFEAGMRE----VNLLVKFASCLLELGEE-TRAHELFDEAVSAF 320

Query: 168 PNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQRHFVVHKMIVPGDRERV 227
           P   D+++ RGQ+  + G+ ++A  +L + + LN N  +A  Q  F           +R 
Sbjct: 321 PKEVDAWFHRGQMRLVEGELKKAREDLQRVVKLNLNHEMAFVQLGFCF------AQEQRF 374

Query: 228 EQSLKEFRNFVDTHSNVVEACTLFAQVLVDQEDFDGAEEYFNRSIRVDPENASLYVHRAM 287
           + +++  +  V            + +++        AEE F +++  D      YV+ A 
Sbjct: 375 DMAIENMKRAVSCQGCPAAVFVHYGELMNMMTRLGEAEELFKKAVARDKTWPYSYVNLAT 434

Query: 288 LMLQARGNVDEAIKLIEKAISIDKSCMFAYETLGTIEVQRGRL-------EEAVKCFNKA 340
           L LQAR +  +A + ++KAI +D SC+ A+       VQR +L        +A +   KA
Sbjct: 435 LELQARNDYMKAFEYLDKAIQMDGSCVAAF-------VQRAQLYMLMQENAKASEDLEKA 487

Query: 341 LPLARDEAELSHIYSLR 357
           +   R  ++L  +  ++
Sbjct: 488 MAQCRTSSDLKQVCGMK 504


>gi|223937044|ref|ZP_03628952.1| TPR repeat-containing protein [bacterium Ellin514]
 gi|223894325|gb|EEF60778.1| TPR repeat-containing protein [bacterium Ellin514]
          Length = 466

 Score = 79.3 bits (194), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 77/308 (25%), Positives = 136/308 (44%), Gaps = 33/308 (10%)

Query: 87  EIESTSSNHTKAL--------ARLLRATVYIFTSQSTKAIEDLTQLVEDTSVDPKIKVNA 138
           E+E   S++T+A+        A   RA  Y     S KAI D TQ ++   ++PK   N 
Sbjct: 109 EVEKAISDYTEAIKLNPKDAWAYAKRAADYHKKGDSEKAISDYTQAIQ---INPK-DANY 164

Query: 139 HIKRAVVHLHAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTI 198
           +  R   +     D+ KA AD D+  K++P    +Y  RG  Y + G  ++A+R+L + I
Sbjct: 165 YDSRGRAYAMK-RDWDKAIADYDQVVKLNPKQVSAYNSRGLAYAMKGDMDKAIRDLSEVI 223

Query: 199 ALNPNFHVARAQRHFVVHKMIVPGDRERVEQSLKEFRNFVDTHSNVVEACTLFAQVLVDQ 258
            LNP    A   R        + GD ++      E      T S   ++    A    +Q
Sbjct: 224 KLNPKDAPAYGSRGL---SYAMKGDWDKAVSDFSELIKLKPTDSIGYDS---RATAYQNQ 277

Query: 259 EDFDGAEEYFNRSIRVDPENASLYVHRAMLMLQARGNVDEAIKLIEKAISIDKSCMFAYE 318
              D A   F+ +I+++ ++A  + +R ++ +  +G+ ++AI+   K+I ++     A+ 
Sbjct: 278 GKLDEALADFSEAIKLNDKDAGAFHNRGLIYV-GKGDWEKAIENFSKSIQLNPQDADAFA 336

Query: 319 TLGTIEVQRGRLEEAVKCFNKALPLARDEAEL-------------SHIYSLRDAAIAQMK 365
             G    Q+G  ++ +   N+AL L   +AE              + +   ++A  A  K
Sbjct: 337 KRGYAYYQKGEYQKGIDDINEALRLNPKDAESYNNLAWFRATCPDASMRKGKEAVEAGKK 396

Query: 366 VCERYNIK 373
            CE  N K
Sbjct: 397 ACELTNWK 404



 Score = 64.7 bits (156), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 70/280 (25%), Positives = 126/280 (45%), Gaps = 25/280 (8%)

Query: 260 DFDGAEEYFNRSIRVDPENASLYVHRAMLMLQARGNVDEAIKLIEKAISIDKSCMFAYET 319
           DF      F+ +IR++PE  + Y +R  L  Q +G V++AI    +AI ++    +AY  
Sbjct: 76  DFTSGIHDFDETIRLNPEGRA-YDNRGNLYDQ-KGEVEKAISDYTEAIKLNPKDAWAYAK 133

Query: 320 LGTIEVQRGRLEEAVKCFNKALPLARDEAELSHIYSLRDAAIAQMKVCER----YNIKKK 375
                 ++G  E+A+  + +A+ +   +A   + Y  R  A A  +  ++    Y+   K
Sbjct: 134 RAADYHKKGDSEKAISDYTQAIQINPKDA---NYYDSRGRAYAMKRDWDKAIADYDQVVK 190

Query: 376 VSPRSQNITKNEKLAIKQLRENNDIIIRPADKGGKTVVMDKADYTQKMTSILNSNDY--- 432
           ++P+  +   +  LA   ++ + D  IR   +  K    D   Y  +  S     D+   
Sbjct: 191 LNPKQVSAYNSRGLAY-AMKGDMDKAIRDLSEVIKLNPKDAPAYGSRGLSYAMKGDWDKA 249

Query: 433 -----EIIPGDPTKTIEESEKYGNLENESGQKHAASDFTKAFADLDEAEKVDPNVADSYY 487
                E+I   PT +I    +    +N+           +A AD  EA K++   A +++
Sbjct: 250 VSDFSELIKLKPTDSIGYDSRATAYQNQG-------KLDEALADFSEAIKLNDKDAGAFH 302

Query: 488 QRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQRHFVW 527
            RG IY   G +E+A+ N  K+I LNP    A A+R + +
Sbjct: 303 NRGLIYVGKGDWEKAIENFSKSIQLNPQDADAFAKRGYAY 342



 Score = 59.7 bits (143), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 70/365 (19%), Positives = 152/365 (41%), Gaps = 43/365 (11%)

Query: 151 SDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQ 210
            D+  A +      K+ P    +++ RG  Y   G +   + + D+TI LNP       +
Sbjct: 41  GDYELAISCWSSVLKLQPTNDAAFFNRGMAYTQKGDFTSGIHDFDETIRLNPEGRAYDNR 100

Query: 211 RHFVVHKMIVPGDRERVEQSLKEFRNFVDTHSNVVEACTLFAQVLVDQEDFDGAEEYFNR 270
            +    K         VE+++ ++   +  +     A    A     + D + A   + +
Sbjct: 101 GNLYDQKG-------EVEKAISDYTEAIKLNPKDAWAYAKRAADYHKKGDSEKAISDYTQ 153

Query: 271 SIRVDPENASLYVHRAMLMLQARGNVDEAIKLIEKAISIDKSCMFAYETLGTIEVQRGRL 330
           +I+++P++A+ Y  R       R + D+AI   ++ + ++   + AY + G     +G +
Sbjct: 154 AIQINPKDANYYDSRGRAYAMKR-DWDKAIADYDQVVKLNPKQVSAYNSRGLAYAMKGDM 212

Query: 331 EEAVKCFNKALPLARDEAELSHIYSLRDAAIAQMKVCERYNIKKKVSPRSQNITKNEKLA 390
           ++A++  ++ + L   +A     Y  R  + A      + +  K VS  S+ I       
Sbjct: 213 DKAIRDLSEVIKLNPKDAP---AYGSRGLSYAM-----KGDWDKAVSDFSELIK------ 258

Query: 391 IKQLRENNDIIIRPADKGGKTVVMDKADYTQKMTSILNSNDYEIIPGDPTKTIEESEK-Y 449
                      ++P D  G         Y  + T+  N    +    D ++ I+ ++K  
Sbjct: 259 -----------LKPTDSIG---------YDSRATAYQNQGKLDEALADFSEAIKLNDKDA 298

Query: 450 GNLENESGQKHAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKT 509
           G   N         D+ KA  +  ++ +++P  AD++ +RG  Y   G+Y++ + ++++ 
Sbjct: 299 GAFHNRGLIYVGKGDWEKAIENFSKSIQLNPQDADAFAKRGYAYYQKGEYQKGIDDINEA 358

Query: 510 IALNP 514
           + LNP
Sbjct: 359 LRLNP 363


>gi|345011528|ref|YP_004813882.1| hypothetical protein [Streptomyces violaceusniger Tu 4113]
 gi|344037877|gb|AEM83602.1| Tetratricopeptide TPR_2 repeat-containing protein [Streptomyces
           violaceusniger Tu 4113]
          Length = 797

 Score = 79.0 bits (193), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 66/227 (29%), Positives = 105/227 (46%), Gaps = 12/227 (5%)

Query: 117 AIEDLTQLVEDTSVDPKIKVNAHIKRAVVHLHAASDFTKAFADLDEAEKVDPNVADSYYQ 176
           A+ED  + +E   + P   V AH  RAVVH  A  DFT A   LD  E ++P       +
Sbjct: 553 ALEDFRRAIE---LAPG-NVRAHFGRAVVH-RATGDFTAAMDALDGVEALEPGSIWVQRE 607

Query: 177 RGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQRHFVVHKMIVPGDRERVEQSLKEFRN 236
           RG+     G+YEEAL  LD  +  +P  HVA   R      M+  G   R++++L +F  
Sbjct: 608 RGETCRRAGRYEEALARLDPVVEADPADHVALGSRG---QTMMALG---RIQEALADFDR 661

Query: 237 FVDTHSNVVEACTLFAQVLVDQEDFDGAEEYFNRSIRVDPENASLYVHRAMLMLQARGNV 296
            ++ H +   A    A+V     D  GA +  +R+  ++P        R  +   A G  
Sbjct: 662 AIERHGDYTWALVRRARVRSTLGDAAGALDDLDRAEALEPGVPGTLGERGDVHRFA-GRY 720

Query: 297 DEAIKLIEKAISIDKSCMFAYETLGTIEVQRGRLEEAVKCFNKALPL 343
           +EAI   ++A+++D    +A  +        GR  EA+   ++A+ L
Sbjct: 721 EEAIAAYDRALALDAGYAWALGSRAMANEALGRRAEALADLDRAVEL 767



 Score = 46.6 bits (109), Expect = 0.038,   Method: Compositional matrix adjust.
 Identities = 21/61 (34%), Positives = 33/61 (54%)

Query: 463 SDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQ 522
            D   A  DLD AE ++P V  +  +RG ++   G+YEEA+   D+ +AL+  +  A   
Sbjct: 684 GDAAGALDDLDRAEALEPGVPGTLGERGDVHRFAGRYEEAIAAYDRALALDAGYAWALGS 743

Query: 523 R 523
           R
Sbjct: 744 R 744



 Score = 43.5 bits (101), Expect = 0.26,   Method: Compositional matrix adjust.
 Identities = 27/77 (35%), Positives = 36/77 (46%), Gaps = 3/77 (3%)

Query: 450 GNLENESGQK---HAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNL 506
           GN+    G+     A  DFT A   LD  E ++P       +RG+     G+YEEAL  L
Sbjct: 566 GNVRAHFGRAVVHRATGDFTAAMDALDGVEALEPGSIWVQRERGETCRRAGRYEEALARL 625

Query: 507 DKTIALNPNFHVARAQR 523
           D  +  +P  HVA   R
Sbjct: 626 DPVVEADPADHVALGSR 642


>gi|409994049|ref|ZP_11277171.1| TPR repeat-containing serine/threonine protein kinase [Arthrospira
           platensis str. Paraca]
 gi|206585491|gb|ACI15551.1| serine/threonine protein kinase [Arthrospira platensis S6]
 gi|409935123|gb|EKN76665.1| TPR repeat-containing serine/threonine protein kinase [Arthrospira
           platensis str. Paraca]
          Length = 732

 Score = 79.0 bits (193), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 97/431 (22%), Positives = 153/431 (35%), Gaps = 93/431 (21%)

Query: 114 STKAIEDLTQLVEDTSVDPKIKVNAHIKRAVVHLHAASDFTKAFADLDEAEKVDPNVADS 173
           + KA     QL  D S   + + NA+        +    + +A AD  +A K+DP   D 
Sbjct: 362 AIKAFNRSIQLFPDNSEAFRKRANAY--------YDLQKYEQAIADYTQAIKLDPTNPDI 413

Query: 174 YYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQRHFVVHKMIVPGDRERVEQSLKE 233
           Y+ R   Y   G +  A+ +L++ I LNP    A  QR    +                 
Sbjct: 414 YFNRSLAYHQMGDFGNAINDLNQVIRLNPEDTDAFYQRGLAHYT---------------- 457

Query: 234 FRNFVDTHSNVVEACTLFAQVLVDQEDFDGAEEYFNRSIRVDPENASLYVHRAMLMLQAR 293
                                   QE+++ A   +   IR  P+++  Y  R    ++A 
Sbjct: 458 ------------------------QENYEAAILDYTEVIRRQPDHSEAYRARGSAHVKA- 492

Query: 294 GNVDEAIKLIEKAISIDKSCMFAYETLGTIEVQRGRLEEAVKCFNKALPLARDEAELSHI 353
           GN+   +    +AI ++     AY   G      G  + A+  +N+ +    D AE    
Sbjct: 493 GNLQAGMADYTEAIRLNPQSAAAYYNRGRARFHLGDYQGALADYNQVISWEPDNAE---- 548

Query: 354 YSLRDAAIAQMKVCERY----NIKKKVSPRSQNITKNEKLAIKQLRENNDIIIRPADKGG 409
                   A    C  Y    N +  +   S++I  N                       
Sbjct: 549 --------AYGNRCSTYINLGNYEAAIESCSRSIQLNPT--------------------- 579

Query: 410 KTVVMDKADYTQKMTSILNSNDYEIIPGDPTKTIEESEKYGNLENESGQKHA-ASDFTKA 468
                   DY  +  + LN  +Y+   GD TK IE         +  G  H+ A D+  A
Sbjct: 580 ------AMDYNNRCIAYLNVQNYDAAIGDCTKAIELEPNNSKAHSNRGLVHSLAEDYEAA 633

Query: 469 FADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQRHFVWT 528
            AD  +A  ++PN A+SY  R Q +   G Y +A+ +  + I + PN   A   R  V  
Sbjct: 634 IADYSQAISLNPNDAESYSNRAQAHAELGNYSQAIADYAQAIRIRPNLAGAFYGRGMVRA 693

Query: 529 STLAELMAFSD 539
           S      A SD
Sbjct: 694 SLGDRRGAISD 704



 Score = 55.8 bits (133), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 44/149 (29%), Positives = 67/149 (44%), Gaps = 12/149 (8%)

Query: 76  DYLTAIRHCTEEIESTSSNHTKALARLLRATVYIFTSQSTKAIEDLTQLVEDTSVDPKIK 135
           +Y  AI  C+  I+   +    A+    R   Y+       AI D T+ +E   ++P   
Sbjct: 562 NYEAAIESCSRSIQLNPT----AMDYNNRCIAYLNVQNYDAAIGDCTKAIE---LEPN-N 613

Query: 136 VNAHIKRAVVHLHAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLD 195
             AH  R +VH   A D+  A AD  +A  ++PN A+SY  R Q +   G Y +A+ +  
Sbjct: 614 SKAHSNRGLVH-SLAEDYEAAIADYSQAISLNPNDAESYSNRAQAHAELGNYSQAIADYA 672

Query: 196 KTIALNPNFHVARAQRHFVVHKMIVPGDR 224
           + I + PN   A   R  V   +   GDR
Sbjct: 673 QAIRIRPNLAGAFYGRGMVRASL---GDR 698



 Score = 51.2 bits (121), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 48/203 (23%), Positives = 88/203 (43%), Gaps = 15/203 (7%)

Query: 321 GTIEVQRGRLEEAVKCFNKALPLARDEAELSHIYSLRDAAIAQMKVCER----YNIKKKV 376
           G   ++ G  E A+K FN+++ L  D +E    +  R  A   ++  E+    Y    K+
Sbjct: 350 GVERLESGDPEAAIKAFNRSIQLFPDNSE---AFRKRANAYYDLQKYEQAIADYTQAIKL 406

Query: 377 SPRSQNITKNEKLAIKQLRENNDIIIRPADKGGKTVVMDKAD---YTQKMTSILNSNDYE 433
            P + +I  N  LA  Q+ +  + I    +   + + ++  D   + Q+  +     +YE
Sbjct: 407 DPTNPDIYFNRSLAYHQMGDFGNAI----NDLNQVIRLNPEDTDAFYQRGLAHYTQENYE 462

Query: 434 IIPGDPTKTIEESEKYGNLENESGQKHA-ASDFTKAFADLDEAEKVDPNVADSYYQRGQI 492
               D T+ I     +       G  H  A +     AD  EA +++P  A +YY RG+ 
Sbjct: 463 AAILDYTEVIRRQPDHSEAYRARGSAHVKAGNLQAGMADYTEAIRLNPQSAAAYYNRGRA 522

Query: 493 YCLFGQYEEALRNLDKTIALNPN 515
               G Y+ AL + ++ I+  P+
Sbjct: 523 RFHLGDYQGALADYNQVISWEPD 545


>gi|427737137|ref|YP_007056681.1| trypsin-like serine protease with C-terminal PDZ domain [Rivularia
           sp. PCC 7116]
 gi|427372178|gb|AFY56134.1| trypsin-like serine protease with C-terminal PDZ domain [Rivularia
           sp. PCC 7116]
          Length = 694

 Score = 79.0 bits (193), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 101/466 (21%), Positives = 192/466 (41%), Gaps = 79/466 (16%)

Query: 63  DLLSKAKRAFEHEDYLTAIRHCTEEIESTSSNHTKALARLLRATVYIFTSQSTKAIEDLT 122
           D   K    ++ +DY  AI+  T+ I+    N   A+A   R           +AI D  
Sbjct: 262 DYFLKGVDKYKKKDYQGAIQDLTQAIKL---NPKYAIAYNNRGVARSELKDYQEAINDFN 318

Query: 123 QLVEDTSVDPKIKVNAHIKRAVVHLHAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYC 182
           Q ++   ++PK+   AH  R     +   D+  A  D ++A K++P +A++Y  RG +  
Sbjct: 319 QALK---INPKL-AEAHGGRGDARSNL-KDYQGAIDDYNQALKINPKLAEAYLNRGTVRG 373

Query: 183 L-FGQYEEALRNLDKTIALNPNFHVARAQRHFVVHKMIVPGDRERVEQSLKEFRNFVDTH 241
                Y+ A+ + ++ + +NP    A              G+R      LK+++  ++  
Sbjct: 374 RNLHDYQGAINDFNQALKINPKLAEAY-------------GNRGAAHSELKDYQEAINDF 420

Query: 242 SNVVEACTLFAQVLVDQ-------EDFDGAEEYFNRSIRVDPENASLYVHRAMLMLQARG 294
           +  ++     A+V  ++       +D+ GA   + +++R++ + A+ Y  R     + + 
Sbjct: 421 NQALKINPKLAKVYYNRGGARSELKDYQGAISDYTQALRINSKYANAYNSRGFTRAKLK- 479

Query: 295 NVDEAIKLIEKAISIDKSCMFAYETLGTIEVQRGRLEE---AVKCFNKALPLARDEAELS 351
           +   AI    +A+ I+     AY   G +   RG L++   A+  FN+ + +   + + +
Sbjct: 480 DYQGAINDFNQALKINPKYADAYYRRGAV---RGNLKDYQGAINDFNQVIKI---DPKYA 533

Query: 352 HIYSLRDAAIAQMK----VCERYNIKKKVSPRSQNITKNEKLAIKQLRENNDIIIRPADK 407
           H YS R  A  ++K      + Y    K++P+  N   N  +A  +L++    I      
Sbjct: 534 HAYSNRGVARYELKDYQGAIQDYTQAIKINPKYANAYYNRGVARYELKDYQGAI------ 587

Query: 408 GGKTVVMDKADYTQKMTSILNSNDYEIIPGDPTKTIEESEKYGNLENESGQKHAASDFTK 467
                     DYTQ +                   I     YG   N    +    D+  
Sbjct: 588 ---------QDYTQVIK------------------IHPKYAYG-YNNRGNARRELKDYQG 619

Query: 468 AFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALN 513
           A  D  +  K+ P +A +YY+RG +   F  Y+ A+ +L+  IA N
Sbjct: 620 AIQDYTQVIKIHPKLAQAYYRRGFVRGKFKDYQGAINDLN--IAAN 663



 Score = 74.7 bits (182), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 79/374 (21%), Positives = 160/374 (42%), Gaps = 57/374 (15%)

Query: 152 DFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQR 211
           D+  A  DL +A K++P  A +Y  RG        Y+EA+ + ++ + +NP      A+ 
Sbjct: 275 DYQGAIQDLTQAIKLNPKYAIAYNNRGVARSELKDYQEAINDFNQALKINPKL----AEA 330

Query: 212 HFVVHKMIVPGDRERVEQSLKEFRNFVDTHSNVVEACTLFAQVLVDQ--------EDFDG 263
           H         G R     +LK+++  +D ++  ++     A+  +++         D+ G
Sbjct: 331 H---------GGRGDARSNLKDYQGAIDDYNQALKINPKLAEAYLNRGTVRGRNLHDYQG 381

Query: 264 AEEYFNRSIRVDPENASLYVHRAMLMLQARGNVDEAIKLIEKAISIDKSCMFAYETLGTI 323
           A   FN++++++P+ A  Y +R     + + +  EAI    +A+ I+      Y   G  
Sbjct: 382 AINDFNQALKINPKLAEAYGNRGAAHSELK-DYQEAINDFNQALKINPKLAKVYYNRGGA 440

Query: 324 EVQRGRLEEAVKCFNKALPLARDEAELSHIYSLRDAAIAQMKVCERYNIKKKVSPRSQNI 383
             +    + A+  + +AL   R  ++ ++ Y+ R    A++K     + +  ++  +Q +
Sbjct: 441 RSELKDYQGAISDYTQAL---RINSKYANAYNSRGFTRAKLK-----DYQGAINDFNQAL 492

Query: 384 TKNEKLAIKQLRENNDIIIRPADKGGKTVVMDKADYTQKMTSILNSNDYEIIPGDPTKTI 443
             N K A    R       R A +G                   N  DY+    D  + I
Sbjct: 493 KINPKYADAYYR-------RGAVRG-------------------NLKDYQGAINDFNQVI 526

Query: 444 EESEKYGNLENESG-QKHAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEA 502
           +   KY +  +  G  ++   D+  A  D  +A K++P  A++YY RG        Y+ A
Sbjct: 527 KIDPKYAHAYSNRGVARYELKDYQGAIQDYTQAIKINPKYANAYYNRGVARYELKDYQGA 586

Query: 503 LRNLDKTIALNPNF 516
           +++  + I ++P +
Sbjct: 587 IQDYTQVIKIHPKY 600



 Score = 68.9 bits (167), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 73/346 (21%), Positives = 143/346 (41%), Gaps = 91/346 (26%)

Query: 187 YEEALRNLDKTIALNPNFHVARAQRHFVVHKMIVPGDRERVEQSLKEFRNFVDTHSNVVE 246
           Y+ A+++L + I LNP + +A   R     ++      +  ++++ +F   +  +  + E
Sbjct: 276 YQGAIQDLTQAIKLNPKYAIAYNNRGVARSEL------KDYQEAINDFNQALKINPKLAE 329

Query: 247 ACTLFAQVLVDQEDFDGAEEYFNRSIRVDPENASLYVHRAMLMLQARGNVDEAIKLIEKA 306
           A         + +D+ GA + +N++++++P+ A  Y++R                     
Sbjct: 330 AHGGRGDARSNLKDYQGAIDDYNQALKINPKLAEAYLNR--------------------- 368

Query: 307 ISIDKSCMFAYETLGTIEVQRGR----LEEAVKCFNKALPLARDEAELSHIYSLRDAAIA 362
                         GT+   RGR     + A+  FN+AL +     +L+  Y  R AA +
Sbjct: 369 --------------GTV---RGRNLHDYQGAINDFNQALKI---NPKLAEAYGNRGAAHS 408

Query: 363 QMK----VCERYNIKKKVSPRSQNITKNEKLAIKQLRENNDIIIRPADKGGKTVVMDKAD 418
           ++K        +N   K++P+   +  N   A  +L++    I               +D
Sbjct: 409 ELKDYQEAINDFNQALKINPKLAKVYYNRGGARSELKDYQGAI---------------SD 453

Query: 419 YTQKMTSILNSNDYEIIPGDPTKTIEESEKYGNLENESGQKHAA-SDFTKAFADLDEAEK 477
           YTQ +   +NS                  KY N  N  G   A   D+  A  D ++A K
Sbjct: 454 YTQALR--INS------------------KYANAYNSRGFTRAKLKDYQGAINDFNQALK 493

Query: 478 VDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQR 523
           ++P  AD+YY+RG +      Y+ A+ + ++ I ++P +  A + R
Sbjct: 494 INPKYADAYYRRGAVRGNLKDYQGAINDFNQVIKIDPKYAHAYSNR 539



 Score = 40.8 bits (94), Expect = 1.9,   Method: Compositional matrix adjust.
 Identities = 30/125 (24%), Positives = 55/125 (44%), Gaps = 1/125 (0%)

Query: 418 DYTQKMTSILNSNDYEIIPGDPTKTIEESEKYGNLENESG-QKHAASDFTKAFADLDEAE 476
           DY  K        DY+    D T+ I+ + KY    N  G  +    D+ +A  D ++A 
Sbjct: 262 DYFLKGVDKYKKKDYQGAIQDLTQAIKLNPKYAIAYNNRGVARSELKDYQEAINDFNQAL 321

Query: 477 KVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQRHFVWTSTLAELMA 536
           K++P +A+++  RG        Y+ A+ + ++ + +NP    A   R  V    L +   
Sbjct: 322 KINPKLAEAHGGRGDARSNLKDYQGAIDDYNQALKINPKLAEAYLNRGTVRGRNLHDYQG 381

Query: 537 FSDEF 541
             ++F
Sbjct: 382 AINDF 386


>gi|346224662|ref|ZP_08845804.1| TPR repeat-containing protein [Anaerophaga thermohalophila DSM
           12881]
          Length = 711

 Score = 79.0 bits (193), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 116/460 (25%), Positives = 200/460 (43%), Gaps = 74/460 (16%)

Query: 105 ATVYIFTSQSTKAIEDLTQLVEDTSVDPKIKVNAHIKRAVVHLHAASDFTKAFADLDEAE 164
              YI T Q  KAI   T+++ DTS  PK+ V A++ R +    +ASD T A  D  +A 
Sbjct: 138 GIAYILTGQFDKAIATYTEIL-DTS--PKL-VRAYLNRGLAKF-SASDTTGALKDFSKAI 192

Query: 165 KVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQRHFVVHKMIVPGDR 224
           +V+P + D Y  R  I    G +++AL ++++ I L P+      +  F +++ I+    
Sbjct: 193 EVNPYIPDGYVNRSMIEYYRGNFDDALADINEAIKLRPD------ESSFYMNRGIIRYQL 246

Query: 225 ERVEQSLKEFRNFVDTHSNVVEACTLFAQVLVDQEDFDGAEEYFNRSIRVDPENASLYVH 284
           + +  ++++F  FV+              +  +  D DGA + F+R + +  E+     +
Sbjct: 247 DDLRGTMEDFDKFVEMEPRNAMGYNNRGILRAEIGDLDGAIDDFSRVLALRGEDLPTLYY 306

Query: 285 RAMLMLQARGNVDEAIKLIEKAISIDKSCMFAYETLGTIEVQR--GRLEEAVKCFNKALP 342
           R ML  + +G   +A  L +  I  D    FA       EV++  G+ + A   +N A+ 
Sbjct: 307 RGML-YKEKGEFRKA--LSDFNIVADAYPDFAPVYYNRAEVKQALGQTKAAQLDYNTAMK 363

Query: 343 LARDEAELSHIYSLRDAAIAQMKVCERYNIKKKVSPRSQNITKNEKLAIKQLRENNDIII 402
           +  D  E      + ++   QM    R N + K +PR +          K+ R+ +D  I
Sbjct: 364 IEMDRRE-----KIGESTSQQM--AARDNEEDKDTPRKR----------KETRKEDDRNI 406

Query: 403 RPADKGGKTVVMD--KADYTQKMT------SILNSN-------DYEI--IPGDPT----- 440
           R  D   K VV+D    D  +++T       I N N        Y I   PGD       
Sbjct: 407 RNYD---KIVVLDDFGTDQPEQLTPHSLRGKIQNRNIMVDLQPPYGISFFPGDTLVHRVR 463

Query: 441 ---KTIEESEKY---------GNLENESGQKHAASDFTKAFADLD---EAEKVDPNVADS 485
              + +E+   Y          N+  E  ++ +A+ F +  + LD   EA   D +    
Sbjct: 464 YFERDVEQLTGYFLFERSIEITNVTKEPDREISAAIF-ETISKLDQKIEAASSDTDKIPF 522

Query: 486 YYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQRHF 525
             +RG +Y        AL N ++ I +NP++++AR  R F
Sbjct: 523 LMERGLLYMDVLNLNNALDNFNQVIRINPDYYIARFARAF 562



 Score = 50.8 bits (120), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 55/283 (19%), Positives = 117/283 (41%), Gaps = 29/283 (10%)

Query: 68  AKRAFEHEDYLTAIRHCTEEIESTSSNHTKALARLLRATVYIFTSQSTKAIEDLTQLVED 127
            + A   EDY+ AI++  + I           A+   A  Y + +     +ED    + D
Sbjct: 36  GRNALYFEDYVLAIQYFNQIIR----------AKPYLAEPYFYRALGKYYLEDYIGALND 85

Query: 128 TS----VDPKIKVNAHIKRAVVHLHAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCL 183
            +     +P + V+A+  R +++ +  +    + AD      +DP   +     G  Y L
Sbjct: 86  CNEALERNPYL-VDAYNLRGILYQNMKNP-EASIADFKRGLDIDPRNINLMINLGIAYIL 143

Query: 184 FGQYEEALRNLDKTIALNPNFHVARAQRHFVVHKMIVPGDRERVEQSLKEFRNFVDTHSN 243
            GQ+++A+    + +  +P    A   R                  +LK+F   ++ +  
Sbjct: 144 TGQFDKAIATYTEILDTSPKLVRAYLNRGLAKFSA------SDTTGALKDFSKAIEVNPY 197

Query: 244 VVEACTLFAQVLVDQEDFDGAEEYFNRSIRVDPENASLYVHRAMLMLQ---ARGNVDEAI 300
           + +     + +   + +FD A    N +I++ P+ +S Y++R ++  Q    RG +++  
Sbjct: 198 IPDGYVNRSMIEYYRGNFDDALADINEAIKLRPDESSFYMNRGIIRYQLDDLRGTMEDFD 257

Query: 301 KLIEKAISIDKSCMFAYETLGTIEVQRGRLEEAVKCFNKALPL 343
           K +E    ++      Y   G +  + G L+ A+  F++ L L
Sbjct: 258 KFVE----MEPRNAMGYNNRGILRAEIGDLDGAIDDFSRVLAL 296



 Score = 42.7 bits (99), Expect = 0.54,   Method: Compositional matrix adjust.
 Identities = 42/177 (23%), Positives = 75/177 (42%), Gaps = 17/177 (9%)

Query: 176 QRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQRHFVVHKMIVPGDRERVEQSLKEFR 235
           +RG +Y        AL N ++ I +NP++++AR  R F  +KM+         QS+KE  
Sbjct: 525 ERGLLYMDVLNLNNALDNFNQVIRINPDYYIARFARAFTRYKMV---------QSVKEMN 575

Query: 236 N--FVDTHSNVVEACT--LFAQVLVDQEDFDGAEEYFNRSIRVDPENASLYVHRAMLMLQ 291
                D     V      L  Q ++D   ++   +   + + ++P+    + +   +   
Sbjct: 576 TGKIPDEDPLAVSGAGDELSQQAILD---YNMIIDDLEKVVEIEPDFEFAWFNLGYMSSV 632

Query: 292 ARGNVDEAIKLIEKAISIDKSCMFAYETLGTIEVQRGRLEEAVKCFNKALPLARDEA 348
            R N +EA++   KAI  +     AY   G + +  G+  E     +KA  L   EA
Sbjct: 633 LR-NFEEAVEFYSKAIEKNSDFAEAYFNRGLVRIFLGKTSEGTLDLSKAGELGVYEA 688


>gi|330509103|ref|YP_004385531.1| TPR-repeat-containing protein [Methanosaeta concilii GP6]
 gi|328929911|gb|AEB69713.1| TPR-repeat protein [Methanosaeta concilii GP6]
          Length = 263

 Score = 79.0 bits (193), Expect = 7e-12,   Method: Compositional matrix adjust.
 Identities = 52/191 (27%), Positives = 100/191 (52%), Gaps = 13/191 (6%)

Query: 161 DEAEKVDPNVADSYYQRGQIYCLF-GQYEEALRNLDKTIALNPNFHVARAQRHFVVHKMI 219
           D+A ++DP  A +++++G++   F G YEEAL   +K+I +NP F  A  Q+      + 
Sbjct: 43  DKAIEIDPQSASAWFKKGELQIDFLGNYEEALNAFNKSIQINPQFADAWYQKG---KTLT 99

Query: 220 VPGDRERVEQSLKEFRNFVDTHSNVVEACTLFAQVLVDQEDFDGAEEYFNRSIRVDPENA 279
             GD    E++L+ +   ++ + N  +A    A VL +    + A   ++++I +DP  A
Sbjct: 100 GYGD---FEEALESYNKSLEINPNSSDAWYWKAGVLAELNRHEEAIPAYDKAIELDPTQA 156

Query: 280 SLYVHRAMLMLQ------ARGNVDEAIKLIEKAISIDKSCMFAYETLGTIEVQRGRLEEA 333
           S ++ R   + +      A  +   A++L ++AI  +   + A++  GT      RL E+
Sbjct: 157 SYWLDRGGALNRLNRTEGANASFTRAVELCDEAIEQNPKSIMAWQGKGTAFYHLERLNES 216

Query: 334 VKCFNKALPLA 344
           ++CF+K + LA
Sbjct: 217 IQCFDKVIELA 227



 Score = 49.7 bits (117), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 54/254 (21%), Positives = 101/254 (39%), Gaps = 60/254 (23%)

Query: 264 AEEYFNRSIRVDPENASLYVHRAMLMLQARGNVDEAIKLIEKAISIDKSCMFAYETLGTI 323
           A E ++++I +DP++AS +  +  L +   GN +EA+    K+I I+     A+   G  
Sbjct: 38  AREAYDKAIEIDPQSASAWFKKGELQIDFLGNYEEALNAFNKSIQINPQFADAWYQKGKT 97

Query: 324 EVQRGRLEEAVKCFNKALPLARDEAELSHIYSLRDAAIAQMKVCERYNIKKKVSPRSQNI 383
               G  EEA++ +NK+L                                 +++P S + 
Sbjct: 98  LTGYGDFEEALESYNKSL---------------------------------EINPNSSDA 124

Query: 384 TKNEKLAIKQLRENNDIIIRPADKGGKTVVMDKADYTQKMTSILNSNDYEIIPGDPTKTI 443
              +   + +L  + + I  PA         DKA                 I  DPT+  
Sbjct: 125 WYWKAGVLAELNRHEEAI--PA--------YDKA-----------------IELDPTQAS 157

Query: 444 EESEKYGNLENESGQKHAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEAL 503
              ++ G L   +  + A + FT+A    DEA + +P    ++  +G  +    +  E++
Sbjct: 158 YWLDRGGALNRLNRTEGANASFTRAVELCDEAIEQNPKSIMAWQGKGTAFYHLERLNESI 217

Query: 504 RNLDKTIALNPNFH 517
           +  DK I L P ++
Sbjct: 218 QCFDKVIELAPMYY 231



 Score = 42.7 bits (99), Expect = 0.48,   Method: Compositional matrix adjust.
 Identities = 20/52 (38%), Positives = 34/52 (65%), Gaps = 1/52 (1%)

Query: 473 DEAEKVDPNVADSYYQRGQIYCLF-GQYEEALRNLDKTIALNPNFHVARAQR 523
           D+A ++DP  A +++++G++   F G YEEAL   +K+I +NP F  A  Q+
Sbjct: 43  DKAIEIDPQSASAWFKKGELQIDFLGNYEEALNAFNKSIQINPQFADAWYQK 94


>gi|384207675|ref|YP_005593395.1| hypothetical protein Bint_0181 [Brachyspira intermedia PWS/A]
 gi|343385325|gb|AEM20815.1| TPR domain-containing protein [Brachyspira intermedia PWS/A]
          Length = 257

 Score = 78.6 bits (192), Expect = 7e-12,   Method: Compositional matrix adjust.
 Identities = 52/191 (27%), Positives = 99/191 (51%), Gaps = 7/191 (3%)

Query: 153 FTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQRH 212
           + +A    D+A ++DPN +++YY RG      GQYEEA+++ DK I LNPN       R 
Sbjct: 19  YKEAIESFDKAIELDPNNSNTYYNRGITKVNLGQYEEAIKDYDKAIELNPNDSDTYNNRG 78

Query: 213 FVVHKMIVPGDRERVEQSLKEFRNFVDTHSNVVEACTLFAQVLVDQEDFDGAEEYFNRSI 272
              + +       + ++++K++   ++  SN  ++         +   +  A + ++++I
Sbjct: 79  IAKYNL------GQYQEAIKDYDKAIELDSNDSDSYNNRGIAKKNLGQYKEAIKDYDKAI 132

Query: 273 RVDPENASLYVHRAMLMLQARGNVDEAIKLIEKAISIDKSCMFAYETLGTIEVQRGRLEE 332
            +D   +S Y +R +   +  G  +EAIK  +KAI +D +   AY   G  +   G+ +E
Sbjct: 133 ELDHNYSSAYSNRGIAK-KNLGLYEEAIKDYDKAIELDTNDSNAYNNRGLAKGSLGQYKE 191

Query: 333 AVKCFNKALPL 343
           A+K F+K++ L
Sbjct: 192 AIKDFDKSIEL 202



 Score = 60.5 bits (145), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 51/202 (25%), Positives = 95/202 (47%), Gaps = 21/202 (10%)

Query: 171 ADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQRHFVVHKMIVPGDRERVEQS 230
           ++ YY+ G  Y    +Y+EA+ + DK I L+PN        +   ++ I   +  + E++
Sbjct: 3   SEKYYEEGLNYFKERKYKEAIESFDKAIELDPN------NSNTYYNRGITKVNLGQYEEA 56

Query: 231 LKEFR-------NFVDTHSNVVEACTLFAQVLVDQEDFDGAEEYFNRSIRVDPENASLYV 283
           +K++        N  DT++N   A     Q     +D+D       ++I +D  ++  Y 
Sbjct: 57  IKDYDKAIELNPNDSDTYNNRGIAKYNLGQYQEAIKDYD-------KAIELDSNDSDSYN 109

Query: 284 HRAMLMLQARGNVDEAIKLIEKAISIDKSCMFAYETLGTIEVQRGRLEEAVKCFNKALPL 343
           +R +   +  G   EAIK  +KAI +D +   AY   G  +   G  EEA+K ++KA+ L
Sbjct: 110 NRGIAK-KNLGQYKEAIKDYDKAIELDHNYSSAYSNRGIAKKNLGLYEEAIKDYDKAIEL 168

Query: 344 ARDEAELSHIYSLRDAAIAQMK 365
             +++   +   L   ++ Q K
Sbjct: 169 DTNDSNAYNNRGLAKGSLGQYK 190



 Score = 59.7 bits (143), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 60/220 (27%), Positives = 98/220 (44%), Gaps = 35/220 (15%)

Query: 298 EAIKLIEKAISIDKSCMFAYETLGTIEVQRGRLEEAVKCFNKALPLARDEAELSHIYSLR 357
           EAI+  +KAI +D +    Y   G  +V  G+ EEA+K ++KA+ L  ++   S  Y+ R
Sbjct: 21  EAIESFDKAIELDPNNSNTYYNRGITKVNLGQYEEAIKDYDKAIELNPND---SDTYNNR 77

Query: 358 DAAIAQMKVCERYNIKKKVSPRSQNITKNEKLAIKQLRENNDIIIRPADKGGKTVVMDKA 417
             A        +YN+                    Q +E     I+  DK  +    D  
Sbjct: 78  GIA--------KYNLG-------------------QYQE----AIKDYDKAIELDSNDSD 106

Query: 418 DYTQKMTSILNSNDYEIIPGDPTKTIEESEKYGNLENESG-QKHAASDFTKAFADLDEAE 476
            Y  +  +  N   Y+    D  K IE    Y +  +  G  K     + +A  D D+A 
Sbjct: 107 SYNNRGIAKKNLGQYKEAIKDYDKAIELDHNYSSAYSNRGIAKKNLGLYEEAIKDYDKAI 166

Query: 477 KVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNF 516
           ++D N +++Y  RG      GQY+EA+++ DK+I LNP++
Sbjct: 167 ELDTNDSNAYNNRGLAKGSLGQYKEAIKDFDKSIELNPSY 206



 Score = 59.7 bits (143), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 61/253 (24%), Positives = 112/253 (44%), Gaps = 42/253 (16%)

Query: 266 EYFNRSIRVDPENASLYVHRAMLMLQARGNVDEAIKLIEKAISIDKSCMFAYETLGTIEV 325
           E F+++I +DP N++ Y +R +  +   G  +EAIK  +KAI ++ +    Y   G  + 
Sbjct: 24  ESFDKAIELDPNNSNTYYNRGITKVNL-GQYEEAIKDYDKAIELNPNDSDTYNNRGIAKY 82

Query: 326 QRGRLEEAVKCFNKALPLARDEAELSHIYSLRDAAIAQMKVCERYNIKKKVSPRSQNITK 385
             G+ +EA+K ++KA+ L  ++++     S  +  IA+  + +                 
Sbjct: 83  NLGQYQEAIKDYDKAIELDSNDSD-----SYNNRGIAKKNLGQY---------------- 121

Query: 386 NEKLAIKQLRENNDIIIRPADKGGKTVVMD---KADYTQKMTSILNSNDYEIIPGDPTKT 442
             K AIK                 K + +D    + Y+ +  +  N   YE    D  K 
Sbjct: 122 --KEAIKDYD--------------KAIELDHNYSSAYSNRGIAKKNLGLYEEAIKDYDKA 165

Query: 443 IEESEKYGNLENESG-QKHAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEE 501
           IE      N  N  G  K +   + +A  D D++ +++P+ +D Y  RG      GQY++
Sbjct: 166 IELDTNDSNAYNNRGLAKGSLGQYKEAIKDFDKSIELNPSYSDVYNNRGVSKENLGQYKD 225

Query: 502 ALRNLDKTIALNP 514
           AL++  K + L+ 
Sbjct: 226 ALKDYKKALELDS 238



 Score = 52.0 bits (123), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 23/51 (45%), Positives = 34/51 (66%)

Query: 465 FTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPN 515
           + +A    D+A ++DPN +++YY RG      GQYEEA+++ DK I LNPN
Sbjct: 19  YKEAIESFDKAIELDPNNSNTYYNRGITKVNLGQYEEAIKDYDKAIELNPN 69



 Score = 47.0 bits (110), Expect = 0.029,   Method: Compositional matrix adjust.
 Identities = 34/106 (32%), Positives = 53/106 (50%), Gaps = 1/106 (0%)

Query: 419 YTQKMTSILNSNDYEIIPGDPTKTIEESEKYGNLENESG-QKHAASDFTKAFADLDEAEK 477
           Y  +  + +N   YE    D  K IE +    +  N  G  K+    + +A  D D+A +
Sbjct: 40  YYNRGITKVNLGQYEEAIKDYDKAIELNPNDSDTYNNRGIAKYNLGQYQEAIKDYDKAIE 99

Query: 478 VDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQR 523
           +D N +DSY  RG      GQY+EA+++ DK I L+ N+  A + R
Sbjct: 100 LDSNDSDSYNNRGIAKKNLGQYKEAIKDYDKAIELDHNYSSAYSNR 145


>gi|332666951|ref|YP_004449739.1| hypothetical protein [Haliscomenobacter hydrossis DSM 1100]
 gi|332335765|gb|AEE52866.1| Tetratricopeptide TPR_1 repeat-containing protein
           [Haliscomenobacter hydrossis DSM 1100]
          Length = 363

 Score = 78.6 bits (192), Expect = 7e-12,   Method: Compositional matrix adjust.
 Identities = 66/246 (26%), Positives = 114/246 (46%), Gaps = 12/246 (4%)

Query: 104 RATVYIFTSQSTKAIEDLTQLVEDTSVDPKIKVNAHIKRAVVHLHAASDFTKAFADLDEA 163
           RA ++    +  +A+ D    +E    DP +    H  RA+V L    D+  A  DL   
Sbjct: 92  RAILFTEMGRLEEALADYDTAIEKNFQDPAV----HFNRAMVLLRQ-GDWENALDDLATT 146

Query: 164 EKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQRHFVVHKMIVPGD 223
            K+ P+ ADSY  R  +Y    +Y+EAL +    I + PNF +A   R  +++ +     
Sbjct: 147 IKLRPDHADSYVARANVYTDLRKYQEALDDYSLAIRIRPNFFIAHFNRANLLYGLGY--- 203

Query: 224 RERVEQSLKEFRNFVDTHSNVVEACTLFAQVLVDQEDFDGAEEYFNRSIRVDPENASLYV 283
              +E++LK++   ++ +   V A      +L D E +D A   ++++I + P  A    
Sbjct: 204 ---LEEALKDYSKVLEINPKEVNAWVSRGNLLDDLERYDEALADYSQAIELQPNGADARF 260

Query: 284 HRAMLMLQARGNVDEAIKLIEKAISIDKSCMFAYETLGTIEVQRGRLEEAVKCFNKALPL 343
           +RA ++L+     DEA++     I  +     AY   G +    GR EEA+  + +A+  
Sbjct: 261 NRA-IVLKKLERYDEALEDYSTIIEQNPGEAEAYNNRGNLLCDLGREEEALADYEQAIIN 319

Query: 344 ARDEAE 349
             D AE
Sbjct: 320 RPDYAE 325



 Score = 70.9 bits (172), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 101/396 (25%), Positives = 176/396 (44%), Gaps = 71/396 (17%)

Query: 137 NAHIKRAVVHLHAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDK 196
           +A+  RAV++      + +A AD  +  +++P    +Y  RG +Y  F + EEA+ + + 
Sbjct: 19  DAYFNRAVLYTQERR-YEEALADYAKVIELNPTDTGAYNNRGNLYIFFNRAEEAISDFNA 77

Query: 197 TIALN---PNFHVARAQRHFVVHKMIVPGDRERVEQSLKEF-----RNFVD--THSNVVE 246
            IALN   P+ +  RA         I+  +  R+E++L ++     +NF D   H N   
Sbjct: 78  AIALNEVDPDAYYNRA---------ILFTEMGRLEEALADYDTAIEKNFQDPAVHFNR-- 126

Query: 247 ACTLFAQVLVDQEDFDGAEEYFNRSIRVDPENASLYVHRAMLMLQARGNVDEAIKLIEKA 306
                A VL+ Q D++ A +    +I++ P++A  YV RA +    R    EA+     A
Sbjct: 127 -----AMVLLRQGDWENALDDLATTIKLRPDHADSYVARANVYTDLR-KYQEALDDYSLA 180

Query: 307 ISIDKSCMFAYETLGTIEVQRGRLEEAVKCFNKALPLARDE--AELSHIYSLRDAAIAQM 364
           I I  +   A+     +    G LEEA+K ++K L +   E  A +S    L D      
Sbjct: 181 IRIRPNFFIAHFNRANLLYGLGYLEEALKDYSKVLEINPKEVNAWVSRGNLLDD------ 234

Query: 365 KVCERYNIKKKVSPRSQNITKNEKLAIKQLRENNDIIIRPADKGGKTVVMDKADYTQKMT 424
              ERY+  + ++  SQ I      A    R N  I+++  ++  + +        +  +
Sbjct: 235 --LERYD--EALADYSQAIELQPNGA--DARFNRAIVLKKLERYDEAL--------EDYS 280

Query: 425 SILNSNDYEIIPGDPTKTIEESEKY---GNLENESGQKHAASDFTKAFADLDEAEKVDPN 481
           +I+  N     PG       E+E Y   GNL  + G++       +A AD ++A    P+
Sbjct: 281 TIIEQN-----PG-------EAEAYNNRGNLLCDLGREE------EALADYEQAIINRPD 322

Query: 482 VADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFH 517
            A+ Y  R  +    G+  EA  +  + IA+NP+  
Sbjct: 323 YAEGYINRAIVLKALGRIGEAREDYQRAIAINPDLR 358



 Score = 41.6 bits (96), Expect = 1.00,   Method: Compositional matrix adjust.
 Identities = 22/61 (36%), Positives = 31/61 (50%)

Query: 463 SDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQ 522
            D+  A  DL    K+ P+ ADSY  R  +Y    +Y+EAL +    I + PNF +A   
Sbjct: 134 GDWENALDDLATTIKLRPDHADSYVARANVYTDLRKYQEALDDYSLAIRIRPNFFIAHFN 193

Query: 523 R 523
           R
Sbjct: 194 R 194


>gi|376005368|ref|ZP_09782882.1| Ser/thr protein kinase [Arthrospira sp. PCC 8005]
 gi|423065278|ref|ZP_17054068.1| serine/threonine protein kinase with TPR repeat protein
           [Arthrospira platensis C1]
 gi|375326295|emb|CCE18635.1| Ser/thr protein kinase [Arthrospira sp. PCC 8005]
 gi|406713188|gb|EKD08360.1| serine/threonine protein kinase with TPR repeat protein
           [Arthrospira platensis C1]
          Length = 754

 Score = 78.6 bits (192), Expect = 7e-12,   Method: Compositional matrix adjust.
 Identities = 97/421 (23%), Positives = 161/421 (38%), Gaps = 67/421 (15%)

Query: 131 DPKIKVNAHIKRAVVHLHAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEA 190
           DP +K  A +KR V  L A  D   A      + ++ P+ ++++ +R   Y    +YE+A
Sbjct: 361 DP-VKSEAALKRGVERLEAG-DPEAAIKAFTRSIQLFPDNSEAFRKRANAYYDLQKYEQA 418

Query: 191 LRNLDKTIALNPNFHVARAQRHFVVHKMIVPGDRERVEQSLKEFRNFVDTHSNVV----E 246
           + +  + I L+P        R    H+M             ++F N ++  + V+    E
Sbjct: 419 IADYTQAIKLDPTNPDIYFNRSLAYHQM-------------RDFGNAINDLNQVIRLNPE 465

Query: 247 ACTLFAQVLV---DQEDFDGAEEYFNRSIRVDPENASLYVHRAMLMLQARGNVDEAIKLI 303
               F Q  +    QE+++ A   +   IR  P N+  Y  R    +++ GN+   +   
Sbjct: 466 DTDAFYQRGLAHYSQENYEAAILDYTEVIRRQPNNSEAYRARGSAHVKS-GNLQAGMADY 524

Query: 304 EKAISIDKSCMFAYETLGTIEVQRGRLEEAVKCFNKALPLARDEAELSHIYSLRDAAIAQ 363
            +AI ++     AY   G      G  + A+  +N+ +    D AE            A 
Sbjct: 525 TEAIRLNPESAAAYYNRGRARFHLGDYQGALADYNQVISWEPDNAE------------AY 572

Query: 364 MKVCERY----NIKKKVSPRSQNITKNEKLAIKQLRENNDIIIRPADKGGKTVVMDKADY 419
              C  Y    N +  +   S++I  N                               DY
Sbjct: 573 GNRCSTYINLGNYEAAIESCSRSIQLNPT---------------------------AMDY 605

Query: 420 TQKMTSILNSNDYEIIPGDPTKTIEESEKYGNLENESGQKHA-ASDFTKAFADLDEAEKV 478
             +  + LN  +Y+   GD TK IE         +  G  H+ A ++  A AD  +A  +
Sbjct: 606 NNRCIAHLNVQNYDAAIGDCTKAIELEPNNSKAHSNRGLVHSLAENYEAAIADYSQAISL 665

Query: 479 DPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQRHFVWTSTLAELMAFS 538
           +PN A+SY  R Q +   G Y EA+ +  + I + PN   A   R  V  S      A S
Sbjct: 666 NPNDAESYSNRAQAHAELGNYSEAIADYAQAIRIRPNLAGAFYGRGMVRASLGDRRGAIS 725

Query: 539 D 539
           D
Sbjct: 726 D 726



 Score = 71.6 bits (174), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 93/406 (22%), Positives = 163/406 (40%), Gaps = 63/406 (15%)

Query: 114 STKAIEDLTQLVEDTSVDPKIKVNAHIKRAVVHLHAASDFTKAFADLDEAEKVDPNVADS 173
           + KA     QL  D S   + + NA+        +    + +A AD  +A K+DP   D 
Sbjct: 384 AIKAFTRSIQLFPDNSEAFRKRANAY--------YDLQKYEQAIADYTQAIKLDPTNPDI 435

Query: 174 YYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQRHFVVHKMIVPGDRERVEQSLKE 233
           Y+ R   Y     +  A+ +L++ I LNP    A  QR    +       +E  E ++ +
Sbjct: 436 YFNRSLAYHQMRDFGNAINDLNQVIRLNPEDTDAFYQRGLAHYS------QENYEAAILD 489

Query: 234 FRNFVDTHSNVVEACTLFAQVLVDQEDFDGAEEYFNRSIRVDPENASLYVHRAMLMLQAR 293
           +   +    N  EA        V   +       +  +IR++PE+A+ Y +R        
Sbjct: 490 YTEVIRRQPNNSEAYRARGSAHVKSGNLQAGMADYTEAIRLNPESAAAYYNRGRARFHL- 548

Query: 294 GNVDEAIKLIEKAISIDKSCMFAYETLGTIEVQRGRLEEAVKCFNKAL---PLARDEAE- 349
           G+   A+    + IS +     AY    +  +  G  E A++  ++++   P A D    
Sbjct: 549 GDYQGALADYNQVISWEPDNAEAYGNRCSTYINLGNYEAAIESCSRSIQLNPTAMDYNNR 608

Query: 350 -LSHIYSLR-DAAIAQMKVCERYNIKKKVSPRSQNITKNEKLAIKQLRENNDIIIRPADK 407
            ++H+     DAAI     C +     ++ P +     N  L +  L EN +  I     
Sbjct: 609 CIAHLNVQNYDAAIGD---CTK---AIELEPNNSKAHSNRGL-VHSLAENYEAAI----- 656

Query: 408 GGKTVVMDKADYTQKMTSILNSNDYEIIPGDPTKTIEESEKYGNLENESGQKHA-ASDFT 466
                    ADY+Q ++  LN ND              +E Y N      Q HA   +++
Sbjct: 657 ---------ADYSQAIS--LNPND--------------AESYSN----RAQAHAELGNYS 687

Query: 467 KAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIAL 512
           +A AD  +A ++ PN+A ++Y RG +    G    A+ + ++   L
Sbjct: 688 EAIADYAQAIRIRPNLAGAFYGRGMVRASLGDRRGAISDFEQAGKL 733



 Score = 58.9 bits (141), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 61/271 (22%), Positives = 114/271 (42%), Gaps = 20/271 (7%)

Query: 72  FEHEDYLTAIRHCTEEIESTSSNHTKALARLLRATVYIFTSQSTKAIEDLTQLVEDTSVD 131
           +  E+Y  AI   TE I    +N     AR    + ++ +      + D T+ +    ++
Sbjct: 478 YSQENYEAAILDYTEVIRRQPNNSEAYRAR---GSAHVKSGNLQAGMADYTEAIR---LN 531

Query: 132 PKIKVNAHIKRAVVHLHAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEAL 191
           P+    A+  R     H   D+  A AD ++    +P+ A++Y  R   Y   G YE A+
Sbjct: 532 PE-SAAAYYNRGRARFHLG-DYQGALADYNQVISWEPDNAEAYGNRCSTYINLGNYEAAI 589

Query: 192 RNLDKTIALNPNF--HVARAQRHFVVHKMIVPGDRERVEQSLKEFRNFVDTHSNVVEACT 249
            +  ++I LNP    +  R   H  V         +  + ++ +    ++   N  +A +
Sbjct: 590 ESCSRSIQLNPTAMDYNNRCIAHLNV---------QNYDAAIGDCTKAIELEPNNSKAHS 640

Query: 250 LFAQVLVDQEDFDGAEEYFNRSIRVDPENASLYVHRAMLMLQARGNVDEAIKLIEKAISI 309
               V    E+++ A   ++++I ++P +A  Y +RA    +  GN  EAI    +AI I
Sbjct: 641 NRGLVHSLAENYEAAIADYSQAISLNPNDAESYSNRAQAHAEL-GNYSEAIADYAQAIRI 699

Query: 310 DKSCMFAYETLGTIEVQRGRLEEAVKCFNKA 340
             +   A+   G +    G    A+  F +A
Sbjct: 700 RPNLAGAFYGRGMVRASLGDRRGAISDFEQA 730


>gi|338811429|ref|ZP_08623644.1| peptidase C14 caspase catalytic subunit p20 [Acetonema longum DSM
           6540]
 gi|337276520|gb|EGO64942.1| peptidase C14 caspase catalytic subunit p20 [Acetonema longum DSM
           6540]
          Length = 571

 Score = 78.6 bits (192), Expect = 9e-12,   Method: Compositional matrix adjust.
 Identities = 80/330 (24%), Positives = 150/330 (45%), Gaps = 20/330 (6%)

Query: 64  LLSKAKRAFEHEDYLTAIRHCTEEIESTSSNHTKALARLLRATVYIFTSQSTKAIEDLTQ 123
           LL +A R +  +DY  A+ +   ++ +  S   +AL    + ++Y       +A+ +L Q
Sbjct: 174 LLEEANRLYVAKDYNQAL-NLYNQVLALESRRVEALVN--KGSIYYLKEAYDQAVRELNQ 230

Query: 124 LVEDTSVDPKIKVNAHIKRAVVHLHAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCL 183
            ++   ++P+  + A+  R +V     SD  +A AD ++A  + P+ A +YY RG  Y +
Sbjct: 231 AIK---INPQY-MYAYYYRGLVRYQQGSD-DQALADFNKAVALAPDFALAYYYRGNCYYM 285

Query: 184 FGQYEEALRNLDKTIALNPNFHVARAQRHFVVHKMIVPGDRERVEQSLKEFRNFVDTHSN 243
            GQY+ A+    + + L+P    A   R  V        +R ++EQ++ ++   ++   +
Sbjct: 286 KGQYDTAINEYSRALELDPQDAYAYLNRANVYR------ERNQLEQAVPDYTRALEIQPD 339

Query: 244 VVEACTLFAQVLVDQEDFDGAEEYFNRSIRVDPENASLYVHRAMLMLQARGNVDEAIKLI 303
           +    +  A        +  A   +   I++D ++A  YV RA   LQA G   +A+   
Sbjct: 340 LAAGRSQRANAYYLTGRYKEAAADYTELIKLDGKDAVAYVGRAQ-ALQAMGRNQQAMSDY 398

Query: 304 EKAISIDKSCMFAYETLGTIEVQRGRLEEAVKCFNKALPLARDEAELSHIYSLRDAAIAQ 363
             A+++D          G   +  GR +EA+    KAL   +D A+    Y LR  A  +
Sbjct: 399 NVALALDHGIAGGLTGRGGCYLMAGRYDEAIADLTKALQ--QDSAD-HRAYELRGVAYLK 455

Query: 364 MKVCE--RYNIKKKVSPRSQNITKNEKLAI 391
             + +    ++ K V+   QN +    LAI
Sbjct: 456 KDMLDLALVDLDKAVALHPQNASAYFNLAI 485



 Score = 39.7 bits (91), Expect = 3.9,   Method: Compositional matrix adjust.
 Identities = 20/61 (32%), Positives = 33/61 (54%)

Query: 467 KAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQRHFV 526
           +A AD ++A  + P+ A +YY RG  Y + GQY+ A+    + + L+P    A   R  V
Sbjct: 257 QALADFNKAVALAPDFALAYYYRGNCYYMKGQYDTAINEYSRALELDPQDAYAYLNRANV 316

Query: 527 W 527
           +
Sbjct: 317 Y 317



 Score = 39.3 bits (90), Expect = 5.2,   Method: Compositional matrix adjust.
 Identities = 22/75 (29%), Positives = 41/75 (54%)

Query: 445 ESEKYGNLENESGQKHAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALR 504
           ES +   L N+    +    + +A  +L++A K++P    +YY RG +    G  ++AL 
Sbjct: 201 ESRRVEALVNKGSIYYLKEAYDQAVRELNQAIKINPQYMYAYYYRGLVRYQQGSDDQALA 260

Query: 505 NLDKTIALNPNFHVA 519
           + +K +AL P+F +A
Sbjct: 261 DFNKAVALAPDFALA 275


>gi|296127389|ref|YP_003634641.1| hypothetical protein [Brachyspira murdochii DSM 12563]
 gi|296019205|gb|ADG72442.1| TPR repeat-containing protein [Brachyspira murdochii DSM 12563]
          Length = 425

 Score = 78.6 bits (192), Expect = 9e-12,   Method: Compositional matrix adjust.
 Identities = 100/416 (24%), Positives = 178/416 (42%), Gaps = 85/416 (20%)

Query: 148 HAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVA 207
           +A  +F +A    D+A + D N A+ YY R    C  G YEEA+++ DK I L P    A
Sbjct: 46  NALGNFEEAINYYDKAIETDENYAELYYNRANTKCNLGLYEEAVKDYDKVIELVPTHSKA 105

Query: 208 RAQRHFVVHKMIVPGDRERVEQSLKEF-------RNFVDTHSN----------VVEACTL 250
              R F        G+    E++LK+           +D +S+            EA   
Sbjct: 106 YDDRGFA------KGNLGYYEEALKDIDKAIILDSTNIDAYSDRAFIKLVSKKYYEAIED 159

Query: 251 FAQVL-VDQED---FDGAEE-------------YFNRSIRVDP-ENASLYVHRAMLMLQA 292
           + +VL +D +D   ++G  +             Y+N++I + P  +A  Y +R +  +  
Sbjct: 160 YKKVLELDDKDVYAYNGIGDAKRSIGLYEEAIFYYNKAIEISPASSAYAYNNRGVCKIGL 219

Query: 293 RGNVDEAIKLIEKAISIDKSCMFAYETLGTIEVQRGRLEEAVKCFNKALPLARDEAELSH 352
           +   +EAI  I K++ I      AY      +   G  E+++K F+KA+ L    A+  +
Sbjct: 220 KL-YNEAILDINKSLEIYDEYTDAYNNRAIAKYNLGLYEDSIKDFDKAIEL---NAQYYY 275

Query: 353 IYSLRDAAIAQMKVCER----YNIKKKVSPRSQNITKNEKLAIKQLRENNDIIIRPADKG 408
            Y+ R  + + + + E     ++    + P   +   N  LA     +NN          
Sbjct: 276 AYNNRGNSKSALGLYEEAISDFDTALNIEPSYIDAYYNRALA-----KNN---------- 320

Query: 409 GKTVVMDKADYTQKMTSILNSNDYEIIPGDPTKTIEESEKYGNLENESGQKHAASDFTKA 468
                +   +Y  K        DY+I+       I+         N++   +  SD+ +A
Sbjct: 321 -----LGLHEYAVK--------DYDIVTEFDNNNIDA------YYNKALSYYNLSDYKEA 361

Query: 469 FADLDEAEKVDPNVADSYYQRG-QIYCLFGQYEEALRNLDKTIALNPNFHVARAQR 523
             + D+  +++P  AD+Y  RG   YC+ G Y+EAL++ DK I +NP++  A+  +
Sbjct: 362 LKNYDKVIELNPQSADAYNNRGFTKYCM-GLYQEALKDYDKAIEINPDYERAKQNK 416



 Score = 50.4 bits (119), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 26/84 (30%), Positives = 52/84 (61%), Gaps = 3/84 (3%)

Query: 136 VNAHIKRAVVHLHAASDFTKAFADLDEAEKVDPNVADSYYQRG-QIYCLFGQYEEALRNL 194
           ++A+  +A+ + +  SD+ +A  + D+  +++P  AD+Y  RG   YC+ G Y+EAL++ 
Sbjct: 342 IDAYYNKALSY-YNLSDYKEALKNYDKVIELNPQSADAYNNRGFTKYCM-GLYQEALKDY 399

Query: 195 DKTIALNPNFHVARAQRHFVVHKM 218
           DK I +NP++  A+  +   + K+
Sbjct: 400 DKAIEINPDYERAKQNKEEALEKI 423



 Score = 44.7 bits (104), Expect = 0.12,   Method: Compositional matrix adjust.
 Identities = 25/68 (36%), Positives = 35/68 (51%)

Query: 459 KHAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHV 518
           ++A  +F +A    D+A + D N A+ YY R    C  G YEEA+++ DK I L P    
Sbjct: 45  ENALGNFEEAINYYDKAIETDENYAELYYNRANTKCNLGLYEEAVKDYDKVIELVPTHSK 104

Query: 519 ARAQRHFV 526
           A   R F 
Sbjct: 105 AYDDRGFA 112



 Score = 41.2 bits (95), Expect = 1.6,   Method: Compositional matrix adjust.
 Identities = 46/224 (20%), Positives = 93/224 (41%), Gaps = 22/224 (9%)

Query: 130 VDPKIKVNAHIKRAVVHLHAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEE 189
           + P     A+  R V  +     + +A  D++++ ++     D+Y  R       G YE+
Sbjct: 200 ISPASSAYAYNNRGVCKI-GLKLYNEAILDINKSLEIYDEYTDAYNNRAIAKYNLGLYED 258

Query: 190 ALRNLDKTIALNPNFHVARAQRHFVVHKMIVPGDRERVEQSLKEFR-------NFVDTHS 242
           ++++ DK I LN  ++ A   R      + +       E+++ +F        +++D + 
Sbjct: 259 SIKDFDKAIELNAQYYYAYNNRGNSKSALGL------YEEAISDFDTALNIEPSYIDAYY 312

Query: 243 NVVEACTLFAQVLVDQEDFDGAEEYFNRSIRVDPENASLYVHRAMLMLQARGNVDEAIKL 302
           N   A           +D+D   E+       D  N   Y ++A+       +  EA+K 
Sbjct: 313 NRALAKNNLGLHEYAVKDYDIVTEF-------DNNNIDAYYNKALSYYNL-SDYKEALKN 364

Query: 303 IEKAISIDKSCMFAYETLGTIEVQRGRLEEAVKCFNKALPLARD 346
            +K I ++     AY   G  +   G  +EA+K ++KA+ +  D
Sbjct: 365 YDKVIELNPQSADAYNNRGFTKYCMGLYQEALKDYDKAIEINPD 408


>gi|397780661|ref|YP_006545133.1| TPR repeat-containing protein [Methanoculleus bourgensis MS2]
 gi|396939163|emb|CCJ36418.1| TPR repeat-containing protein MJ1345 [Methanoculleus bourgensis
           MS2]
          Length = 627

 Score = 78.2 bits (191), Expect = 9e-12,   Method: Compositional matrix adjust.
 Identities = 90/398 (22%), Positives = 160/398 (40%), Gaps = 54/398 (13%)

Query: 131 DPKIKVNAHIKRAVVH----LHAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQ 186
           D  +K+NA+   A  H    L+ A  + +A    D+  ++DP+    +  RGQ       
Sbjct: 110 DRALKLNANAATAWYHKGRVLNTACRYREAAECFDQGIRIDPDCVRLWAARGQALYRLQH 169

Query: 187 YEEALRNLDKTIALNPNFHVARAQRHFVVHKMIVPGDRERVEQSLKEFRNFVDTHSNVVE 246
           Y+EA     + + L P+   A   R      M       R   +L  +   V      +E
Sbjct: 170 YQEAAEYCGQAVKLAPDCADAWLTRGHAFRNM------GRTTDALACYDRVVTIEPGRIE 223

Query: 247 ACTLFAQVLVDQEDFDGAEEYFNRSIRVDPENASLYVHRAML-MLQARGNVDEAIKLIEK 305
           A      VL     +D A + ++R I +DP NA+ +  R  + +L +R    +A+   ++
Sbjct: 224 AWLARGTVLAVDRRYDAAIDCYDRVIALDPGNANAWYARGTIQVLLSR--YGDALDSYDQ 281

Query: 306 AISIDKSCMFAYETLGTIEVQRGRLEEAVKCFNKALPLARDEAELSHIYSLRDAAIAQMK 365
           A++ID      + T G       R EEAV+ F++AL +   +AE   +Y+ R  A+  ++
Sbjct: 282 ALAIDSGHADTWSTRGRTLATLKRYEEAVRSFDRALAVRPGDAET--LYN-RGLALQNLE 338

Query: 366 VCER----YNIKKKVSPRSQNITKNEKLAIKQLRENNDIIIRPADKGGKTVVMDKADYTQ 421
             E     Y+   + +P    I  ++ +A+K+L+   D+ +   D+  +   +D   + +
Sbjct: 339 RYEEAIDCYDRAFRTNPDLAGIWYHKAMALKRLKR-YDLALICFDRALRENAIDPEIWHR 397

Query: 422 KMTSILNSNDYEIIPGDPTKTIEESEKYGNLENESGQKHAASDFTKAFADLDEAEKVDPN 481
           K   + N   YE                                 KA    D+A ++  +
Sbjct: 398 KGLVLFNLKRYE---------------------------------KAIECFDQALRLRAD 424

Query: 482 VADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVA 519
              + Y RG+ Y   G YE A+ N    +   P   VA
Sbjct: 425 HPGACYYRGESYYALGNYEAAVANYQTVVRATPENAVA 462



 Score = 62.4 bits (150), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 97/439 (22%), Positives = 179/439 (40%), Gaps = 91/439 (20%)

Query: 100 ARLLRATVYIFTSQSTKAIEDLTQLVEDTSVDPKIKVNAHIKRAVVHLHAASDFTKAFAD 159
           A L R TV     +   AI+   +++   ++DP    NA   R  + +   S +  A   
Sbjct: 224 AWLARGTVLAVDRRYDAAIDCYDRVI---ALDPG-NANAWYARGTIQV-LLSRYGDALDS 278

Query: 160 LDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQRHFVVHKMI 219
            D+A  +D   AD++  RG+      +YEEA+R+ D+ +A                   +
Sbjct: 279 YDQALAIDSGHADTWSTRGRTLATLKRYEEAVRSFDRALA-------------------V 319

Query: 220 VPGDRERVEQSLKEFRNFVDTHSNVVEACTLFAQVLVDQ--EDFDGAEEYFNRSIRVDPE 277
            PGD E                       TL+ + L  Q  E ++ A + ++R+ R +P+
Sbjct: 320 RPGDAE-----------------------TLYNRGLALQNLERYEEAIDCYDRAFRTNPD 356

Query: 278 NASLYVHRAMLMLQARGNVDEAIKLIEKAI---SIDKSCMFAYETLGTIEVQRGRLEEAV 334
            A ++ H+AM + + +   D A+   ++A+   +ID      +   G +     R E+A+
Sbjct: 357 LAGIWYHKAMALKRLK-RYDLALICFDRALRENAIDPE---IWHRKGLVLFNLKRYEKAI 412

Query: 335 KCFNKALPLARDEAELSH-----IYSLRD--AAIAQMKVCERYNIKKKVSPRSQNITKNE 387
           +CF++AL L  D     +      Y+L +  AA+A       Y    + +P +     N 
Sbjct: 413 ECFDQALRLRADHPGACYYRGESYYALGNYEAAVAN------YQTVVRATPENAVAWNNY 466

Query: 388 KLAIKQLRENNDII--------IRPADKGGKTVVMDKADYTQKMTSILNSNDYEIIPGDP 439
             A+ +L    + +        I P ++G   V  +KA+    + SIL+  D  ++  D 
Sbjct: 467 GNALYRLERYEETLVCYERALEIDPVNRG---VWNNKAN----VLSILSHYDKALVCYDQ 519

Query: 440 TKTIEESEKYGNLENESGQKHA---ASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLF 496
               E     GN +    +  A      + +A      A + DP   + +  +G    + 
Sbjct: 520 ----ELRANPGNADAWCKKGLALFILGRYGEAVTCYARALEADPAKVEIWSMKGNALVIM 575

Query: 497 GQYEEALRNLDKTIALNPN 515
            + EEAL   ++ +A NP+
Sbjct: 576 ERSEEALECYNRALAANPD 594



 Score = 58.2 bits (139), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 53/225 (23%), Positives = 97/225 (43%), Gaps = 12/225 (5%)

Query: 125 VEDTSVDPKIKVNAHIKRAVVHLHAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLF 184
           + + ++DP+I       R  + L     + KA    D+A ++  +   + Y RG+ Y   
Sbjct: 385 LRENAIDPEI-----WHRKGLVLFNLKRYEKAIECFDQALRLRADHPGACYYRGESYYAL 439

Query: 185 GQYEEALRNLDKTIALNPNFHVARAQRHFVVHKMIVPGDRERVEQSLKEFRNFVDTHSNV 244
           G YE A+ N    +   P   VA       ++++      ER E++L  +   ++     
Sbjct: 440 GNYEAAVANYQTVVRATPENAVAWNNYGNALYRL------ERYEETLVCYERALEIDPVN 493

Query: 245 VEACTLFAQVLVDQEDFDGAEEYFNRSIRVDPENASLYVHRAMLMLQARGNVDEAIKLIE 304
                  A VL     +D A   +++ +R +P NA  +  +  L L   G   EA+    
Sbjct: 494 RGVWNNKANVLSILSHYDKALVCYDQELRANPGNADAWCKKG-LALFILGRYGEAVTCYA 552

Query: 305 KAISIDKSCMFAYETLGTIEVQRGRLEEAVKCFNKALPLARDEAE 349
           +A+  D + +  +   G   V   R EEA++C+N+AL    D+A+
Sbjct: 553 RALEADPAKVEIWSMKGNALVIMERSEEALECYNRALAANPDDAD 597


>gi|282901533|ref|ZP_06309455.1| TPR repeat protein [Cylindrospermopsis raciborskii CS-505]
 gi|281193576|gb|EFA68551.1| TPR repeat protein [Cylindrospermopsis raciborskii CS-505]
          Length = 1280

 Score = 78.2 bits (191), Expect = 9e-12,   Method: Compositional matrix adjust.
 Identities = 107/468 (22%), Positives = 187/468 (39%), Gaps = 35/468 (7%)

Query: 78  LTAIRHCTEEIESTSSNHTKALARLLRATVYIFTSQSTKAIEDLTQLVEDTSVDPKIKVN 137
           L  ++H   E E      +  LA++      +   Q+   I    Q V    +D +   +
Sbjct: 150 LEILQHIETEFEQALPKFSVHLAQMQAVCSTLSPRQTDTIISLGNQAV--LEIDLEEDAH 207

Query: 138 AHIKRAVV------HLHAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEAL 191
            ++ R +       H  A +DFT++ +       ++ N+A +Y +RG      G  +EA+
Sbjct: 208 TYLCRGIARSDLGDHRGAINDFTQSIS-------INSNLAQAYMERGIARSNLGDGQEAI 260

Query: 192 RNLDKTIALNPNFHVARAQRHFVVHKMIVPGDRERVEQSLKEFRNFVDTHSNVVEACTLF 251
            + ++ + +NPN  +A   R  V H      D   +E+++ +F   +  +S   +A T  
Sbjct: 261 EDFNQALDINPNLALAAYSRG-VTHS-----DMGYLEKAIDDFNQTLHLNSAFFDAYTRR 314

Query: 252 AQVLVDQEDFDGAEEYFNRSIRVDPENASLYVHRAMLMLQARGNVDEAIKLIEKAISIDK 311
                D  D  GA + FN+ IR++   A  Y  R ++     GN  EAI    +AI I+ 
Sbjct: 315 GLARYDLGDKQGAIDDFNQVIRINSHFADGYAARGLVYCDL-GNHQEAINDFSQAIRINP 373

Query: 312 SCMFAYETLGTIEVQRGRLEEAVKCFNKALPLARDEAELSH----IYSLRDAAIAQMKVC 367
           +   AY   G    Q G  + A+  + ++L L    A   +    I S   +  A M  C
Sbjct: 374 NYAQAYHNRGVARSQLGDKQGAIDDYTQSLNLNPKFASAYYNRGIIRSDLGSNKAAMDDC 433

Query: 368 ERYNIKKKVSPRSQNITKNEKLAIKQLRENNDIIIRPADKGGKTVVMDKADYTQKMTSIL 427
            +     +++P       N + AI+    N    I    +  +        Y    T+ +
Sbjct: 434 TQ---AIRINPNYAE-AYNNRGAIRTYLGNYQGAIDDYIQALRVDSNYVEAYYNWGTTRI 489

Query: 428 NSNDYEIIPGDPTKTIEESEKYGNLENESG-QKHAASDFTKAFADLDEAEKVDPNVADSY 486
           N  D E    D T+ I  +  Y       G  +    D   A  D  +A   +PN A +Y
Sbjct: 490 NLEDNEGAIDDYTQAININPNYAQAYYGRGIARFNLGDKQGAIDDYTQAINTNPNYAQAY 549

Query: 487 YQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQRHFVWTSTLAEL 534
           Y RG         + ++ +  + I +NPN+    AQ ++ W    +EL
Sbjct: 550 YNRGIARFNLEDKQGSVDDYTQAININPNY----AQAYYAWGMLRSEL 593



 Score = 76.3 bits (186), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 96/462 (20%), Positives = 182/462 (39%), Gaps = 57/462 (12%)

Query: 94  NHTKALARLLRATVYIFTSQSTKAIEDLTQLVEDTSVDPKIKVNAHIKRAVVHLHAASDF 153
           N   ALA   R   +       KAI+D  Q +   S       +A+ +R +   +   D 
Sbjct: 270 NPNLALAAYSRGVTHSDMGYLEKAIDDFNQTLHLNSA----FFDAYTRRGLAR-YDLGDK 324

Query: 154 TKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQRHF 213
             A  D ++  +++ + AD Y  RG +YC  G ++EA+ +  + I +NPN+  A   R  
Sbjct: 325 QGAIDDFNQVIRINSHFADGYAARGLVYCDLGNHQEAINDFSQAIRINPNYAQAYHNRGV 384

Query: 214 VVHKMIVPGDRERVEQSLKEFRNFVDTHSNVVEACTLFAQVLVDQEDFDGAEEYFNRSIR 273
              ++   GD+   + ++ ++   ++ +     A      +  D      A +   ++IR
Sbjct: 385 ARSQL---GDK---QGAIDDYTQSLNLNPKFASAYYNRGIIRSDLGSNKAAMDDCTQAIR 438

Query: 274 VDPENASLYVHRAMLMLQARGNVDEAIKLIEKAISIDKSCMFAYETLGTIEVQRGRLEEA 333
           ++P  A  Y +R  +     GN   AI    +A+ +D + + AY   GT  +     E A
Sbjct: 439 INPNYAEAYNNRGAIRTYL-GNYQGAIDDYIQALRVDSNYVEAYYNWGTTRINLEDNEGA 497

Query: 334 VKCFNKALPLARDEAELSHIYSLRDAAIAQMKVCER------YNIKKKVSPRSQNITKNE 387
           +  + +A+ +  + A+  +        IA+  + ++      Y      +P       N 
Sbjct: 498 IDDYTQAININPNYAQAYY-----GRGIARFNLGDKQGAIDDYTQAINTNPNYAQAYYNR 552

Query: 388 KLAIKQLRENND--------IIIRP-------ADKGGKTVVMDKADYTQKMTSILNSN-- 430
            +A   L +           I I P       A    ++ + DK +     T  LN N  
Sbjct: 553 GIARFNLEDKQGSVDDYTQAININPNYAQAYYAWGMLRSELGDKPEAVNNYTQALNINPD 612

Query: 431 ----------------DYEIIPGDPTKTIEESEKYGNLENESG-QKHAASDFTKAFADLD 473
                           D +    D T+ +  +  Y  + N  G  +   +D+ +A  D  
Sbjct: 613 DTETYVARGLTRSELGDNQGAIDDYTQALNLNPDYACIYNNRGIVRSDIADYQRAIDDYT 672

Query: 474 EAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPN 515
           EA  + P+ AD+YY R  +Y   G Y+ A+ +  +++ +  N
Sbjct: 673 EAINISPDYADAYYNRAIVYYDLGNYQRAIDDYTQSLEIKSN 714



 Score = 75.9 bits (185), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 86/399 (21%), Positives = 165/399 (41%), Gaps = 51/399 (12%)

Query: 117 AIEDLTQLVEDTSVDPKIKVNAHIKRAVVHLHAASDFTKAFADLDEAEKVDPNVADSYYQ 176
           AI+D TQ +        I  N  I R+ +     +D+ +A  D  EA  + P+ AD+YY 
Sbjct: 633 AIDDYTQALNLNPDYACIYNNRGIVRSDI-----ADYQRAIDDYTEAINISPDYADAYYN 687

Query: 177 RGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQRHFVVHKMIVPGDRERVEQSLKEFRN 236
           R  +Y   G Y+ A+ +  +++ +  N   A   R   ++K+   GD    + ++ +F +
Sbjct: 688 RAIVYYDLGNYQRAIDDYTQSLEIKSNCADAYIGRGTALYKL---GDS---QGAINDFHH 741

Query: 237 FVDTHSNVVEACTLFAQVLVDQEDFDGAEEYFNRSIRVDPENASLYVHRAMLMLQARGNV 296
            +D   +  +A      V  +  D  GA   F+ ++ +DP  A  Y +R ++  + R N 
Sbjct: 742 ALDIDPSYADAYNNRGIVRYELGDHQGAIGDFHHALDIDPSYADAYNNRGIVRYELRDNR 801

Query: 297 DEAIKLIEKAISIDKSCMFAYETLGTIEVQRGRLEEAVKCFNKALPLARD--EAELSHIY 354
             AI+    A++I+ +   AY   G + +  G  + A++ F +A  +A +  E+ ++  Y
Sbjct: 802 G-AIEDFNHALNINSNYAQAYNNRGIVRICLGERQLAIEDFTQATIIASNYTESYINRGY 860

Query: 355 SLRDAAIAQMKVCERYNIKKKVSPRSQNITKNEKLAIKQLRENNDIIIRPADKGGKTVVM 414
           +  +    Q K  E +N    ++P       N  +A   L                    
Sbjct: 861 ARYELGNRQ-KAIEDFNQALNINPNYAQAYNNRGVAYTDL-------------------- 899

Query: 415 DKADYTQKMTSILNSNDYEIIPGDPTKTIEESEKYGNLENESG-QKHAASDFTKAFADLD 473
                           D E    D ++ ++ +  Y    N  G   +   D   A  D +
Sbjct: 900 ---------------GDSEWAKDDFSQALQINPYYAEAYNNRGIVCYKLGDRQGAIEDFN 944

Query: 474 EAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIAL 512
           +A K++ N  ++Y  RG I    G  + A+ + ++ ++L
Sbjct: 945 QALKINSNYVEAYNIRGNIRYELGDRQGAIEDFNRALSL 983



 Score = 68.6 bits (166), Expect = 9e-09,   Method: Compositional matrix adjust.
 Identities = 103/471 (21%), Positives = 182/471 (38%), Gaps = 52/471 (11%)

Query: 75  EDYLTAIRHCTEEIESTSSNHTKALARLLRATVYIFTSQSTKAIEDLTQLVEDTSVDPKI 134
           ED   AI   T+ I   + N   A A   R            AI+D TQ +   + +P  
Sbjct: 492 EDNEGAIDDYTQAI---NINPNYAQAYYGRGIARFNLGDKQGAIDDYTQAI---NTNPNY 545

Query: 135 KVNAHIKRAVVHLHAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNL 194
              A+  R +   +   D   +  D  +A  ++PN A +YY  G +    G   EA+ N 
Sbjct: 546 -AQAYYNRGIARFNL-EDKQGSVDDYTQAININPNYAQAYYAWGMLRSELGDKPEAVNNY 603

Query: 195 DKTIALNPNFHVARAQRHFVVHKMIVPGDRERVEQSLKEFRNFVDTHSNVVEACTLFAQV 254
            + + +NP+       R     ++   GD +       +  N      N   AC    + 
Sbjct: 604 TQALNINPDDTETYVARGLTRSEL---GDNQGAIDDYTQALNL-----NPDYACIYNNRG 655

Query: 255 LV--DQEDFDGAEEYFNRSIRVDPENASLYVHRAMLMLQARGNVDEAIKLIEKAISIDKS 312
           +V  D  D+  A + +  +I + P+ A  Y +RA++     GN   AI    +++ I  +
Sbjct: 656 IVRSDIADYQRAIDDYTEAINISPDYADAYYNRAIVYYDL-GNYQRAIDDYTQSLEIKSN 714

Query: 313 CMFAYETLGTIEVQRGRLEEAVKCFNKALPLARDEAELSHIYSLRDAAIAQMKVCER--- 369
           C  AY   GT   + G  + A+  F+ AL +     + S+  +  +  I + ++ +    
Sbjct: 715 CADAYIGRGTALYKLGDSQGAINDFHHALDI-----DPSYADAYNNRGIVRYELGDHQGA 769

Query: 370 ---YNIKKKVSPRSQNITKNEKLAIKQLRENNDIIIRPADKGGKTVVMDKADYTQKMTSI 426
              ++    + P   +   N  +   +LR+N     R A +     +   ++Y Q     
Sbjct: 770 IGDFHHALDIDPSYADAYNNRGIVRYELRDN-----RGAIEDFNHALNINSNYAQAYN-- 822

Query: 427 LNSNDYEIIPGDPTKTIEE-----------SEKYGNLENESGQKHAASDFTKAFADLDEA 475
            N     I  G+    IE+           +E Y    N    ++   +  KA  D ++A
Sbjct: 823 -NRGIVRICLGERQLAIEDFTQATIIASNYTESY---INRGYARYELGNRQKAIEDFNQA 878

Query: 476 EKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQRHFV 526
             ++PN A +Y  RG  Y   G  E A  +  + + +NP +  A   R  V
Sbjct: 879 LNINPNYAQAYNNRGVAYTDLGDSEWAKDDFSQALQINPYYAEAYNNRGIV 929



 Score = 63.5 bits (153), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 66/304 (21%), Positives = 128/304 (42%), Gaps = 43/304 (14%)

Query: 72  FEHEDYLTAIRHCTEEIESTSSNHTKALARLLRATVYIFTSQSTKAIEDLTQLVEDTSVD 131
           ++  +Y  AI   T+ +E  S+    A A + R T       S  AI D    ++   +D
Sbjct: 693 YDLGNYQRAIDDYTQSLEIKSN---CADAYIGRGTALYKLGDSQGAINDFHHALD---ID 746

Query: 132 PKIKVNAHIKRAVVHLHAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEAL 191
           P    +A+  R +V  +   D   A  D   A  +DP+ AD+Y  RG +         A+
Sbjct: 747 PSY-ADAYNNRGIVR-YELGDHQGAIGDFHHALDIDPSYADAYNNRGIVRYELRDNRGAI 804

Query: 192 RNLDKTIALNPNFHVARAQRHFVVHKMIVPGDRERV------------------------ 227
            + +  + +N N+  A   R  V    I  G+R+                          
Sbjct: 805 EDFNHALNINSNYAQAYNNRGIV---RICLGERQLAIEDFTQATIIASNYTESYINRGYA 861

Query: 228 -------EQSLKEFRNFVDTHSNVVEACTLFAQVLVDQEDFDGAEEYFNRSIRVDPENAS 280
                  ++++++F   ++ + N  +A         D  D + A++ F+++++++P  A 
Sbjct: 862 RYELGNRQKAIEDFNQALNINPNYAQAYNNRGVAYTDLGDSEWAKDDFSQALQINPYYAE 921

Query: 281 LYVHRAMLMLQARGNVDEAIKLIEKAISIDKSCMFAYETLGTIEVQRGRLEEAVKCFNKA 340
            Y +R ++  +  G+   AI+   +A+ I+ + + AY   G I  + G  + A++ FN+A
Sbjct: 922 AYNNRGIVCYKL-GDRQGAIEDFNQALKINSNYVEAYNIRGNIRYELGDRQGAIEDFNRA 980

Query: 341 LPLA 344
           L L 
Sbjct: 981 LSLG 984



 Score = 59.7 bits (143), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 95/472 (20%), Positives = 192/472 (40%), Gaps = 68/472 (14%)

Query: 55  DTNESHELDLLSKAKRAFEHEDYLTAIRHCTEEIESTSSNHTKAL--ARLLRATVYIFTS 112
           +TN ++     ++    F  ED   ++   T+ I + + N+ +A     +LR+ +     
Sbjct: 540 NTNPNYAQAYYNRGIARFNLEDKQGSVDDYTQAI-NINPNYAQAYYAWGMLRSEL----G 594

Query: 113 QSTKAIEDLTQLVEDTSVDPKIKVNAHIKRAVVHLHAASDFTKAFADLDEAEKVDPNVAD 172
              +A+ + TQ +     D +  V   + R+ +      D   A  D  +A  ++P+ A 
Sbjct: 595 DKPEAVNNYTQALNINPDDTETYVARGLTRSEL-----GDNQGAIDDYTQALNLNPDYAC 649

Query: 173 SYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQRHFVVHKMIVPGDRERVEQSLK 232
            Y  RG +      Y+ A+ +  + I ++P++  A   R  V + +   G+ +R   ++ 
Sbjct: 650 IYNNRGIVRSDIADYQRAIDDYTEAINISPDYADAYYNRAIVYYDL---GNYQR---AID 703

Query: 233 EFRNFVDTHSNVVEACTLFAQVLVDQEDFDGAEEYFNRSIRVDPENASLYVHRAMLMLQA 292
           ++   ++  SN  +A       L    D  GA   F+ ++ +DP  A  Y +R ++  + 
Sbjct: 704 DYTQSLEIKSNCADAYIGRGTALYKLGDSQGAINDFHHALDIDPSYADAYNNRGIVRYEL 763

Query: 293 RGNVDEAIKLIEKAISIDKSCMFAYETLGTIEVQRGRLEEAVKCFNKALPLARDEAELSH 352
            G+   AI     A+ ID S   AY   G +  +      A++ FN AL +  + A+   
Sbjct: 764 -GDHQGAIGDFHHALDIDPSYADAYNNRGIVRYELRDNRGAIEDFNHALNINSNYAQ--- 819

Query: 353 IYSLRDAAIAQMKVCERYNIKKKVSPRSQNITKNEKLAIKQLRENNDIIIRPADKGGKTV 412
             +  +  I ++ + ER                  +LAI+   +              T+
Sbjct: 820 --AYNNRGIVRICLGER------------------QLAIEDFTQ-------------ATI 846

Query: 413 VMDKADYTQKMTSILNSNDYEIIPGDPTKTIEE-------SEKYGNLENESGQKHA-ASD 464
           +   ++YT+   S +N        G+  K IE+       +  Y    N  G  +    D
Sbjct: 847 I--ASNYTE---SYINRGYARYELGNRQKAIEDFNQALNINPNYAQAYNNRGVAYTDLGD 901

Query: 465 FTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNF 516
              A  D  +A +++P  A++Y  RG +    G  + A+ + ++ + +N N+
Sbjct: 902 SEWAKDDFSQALQINPYYAEAYNNRGIVCYKLGDRQGAIEDFNQALKINSNY 953


>gi|384208243|ref|YP_005593963.1| hypothetical protein Bint_0754 [Brachyspira intermedia PWS/A]
 gi|343385893|gb|AEM21383.1| TPR domain-containing protein [Brachyspira intermedia PWS/A]
          Length = 420

 Score = 78.2 bits (191), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 93/378 (24%), Positives = 152/378 (40%), Gaps = 78/378 (20%)

Query: 145 VHLHAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNF 204
           ++  A  ++ +A    DEA K++PN+AD+YY +       G  +EA+   DK I L  ++
Sbjct: 106 IYKSANGEYAEAIKYYDEAIKLNPNMADAYYNKAIAKTKLGLLKEAIEEYDKAIELRADY 165

Query: 205 HVARAQRHFVVHKMIVPGDRERVEQSLKEFRNFVDTHSNVVEACTLFAQVLVDQEDFDGA 264
             A   R       ++  D   +E+++K+                               
Sbjct: 166 TYAYYNRG------LLKSDLGLLEEAIKD------------------------------- 188

Query: 265 EEYFNRSIRVDPENASLYVHRAMLMLQARGNVDEAIKLIEKAISIDKSCMFAYETLGTIE 324
              F++++ +DP     Y ++ +L  +  G   EAIK   KAI ++ +   AY   G  +
Sbjct: 189 ---FDKALSIDPNLFDAYNNKGLLEDEL-GFSKEAIKDFSKAIKLNPNYALAYNNRGIAK 244

Query: 325 VQRGRLEEAVKCFNKALPLARDEAELSHIYSLRDAAIAQMKVCERYNIKKKVSPRSQNIT 384
              G  EEA+K ++KA+ L  + A     Y+ R  A   + + E                
Sbjct: 245 DNLGLYEEAIKDYDKAIKLNPNYA---LAYNSRGNAKDNLGLYEE--------------- 286

Query: 385 KNEKLAIKQLRENNDIIIRPADKGGKTVVMDKAD-YTQKMTSILNSNDYEIIPGDPTKTI 443
                AI+    N  I ++P          D  D Y  +  +  N   YE    D  K I
Sbjct: 287 -----AIEDF--NKAIKLKP----------DNTDAYNNRGNTKYNLELYEEAIKDYDKAI 329

Query: 444 EESEKYGNLENESGQ-KHAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEA 502
           +    Y    N  G  K     + +A  D D+A K+ P+ AD+Y  RG      G YEEA
Sbjct: 330 KLDPNYAFAYNNRGNAKDNLGLYEEAIEDFDKAIKLKPDYADAYNNRGLTKENLGLYEEA 389

Query: 503 LRNLDKTIALNPNFHVAR 520
           L++  K + L+P+   AR
Sbjct: 390 LKDYKKALKLDPSSECAR 407



 Score = 77.4 bits (189), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 66/237 (27%), Positives = 108/237 (45%), Gaps = 54/237 (22%)

Query: 117 AIEDLTQLVEDTSVDPKIKVNAHIKRAVVHLHAASDFTK-AFADLDEAEKVDPNVADSYY 175
           AI+D  + +   S+DP +  +A+  + ++       F+K A  D  +A K++PN A +Y 
Sbjct: 185 AIKDFDKAL---SIDPNL-FDAYNNKGLLEDELG--FSKEAIKDFSKAIKLNPNYALAYN 238

Query: 176 QRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQRHFVVHKMIVPGDRERVEQSLKEFR 235
            RG      G YEEA+++ DK I LNPN+ +A   R                        
Sbjct: 239 NRGIAKDNLGLYEEAIKDYDKAIKLNPNYALAYNSR------------------------ 274

Query: 236 NFVDTHSNVVEACTLFAQVLVDQEDFDGAEEYFNRSIRVDPENASLYVHRAMLMLQARGN 295
                  N  +   L+ + + D          FN++I++ P+N   Y +R       + N
Sbjct: 275 ------GNAKDNLGLYEEAIED----------FNKAIKLKPDNTDAYNNRG----NTKYN 314

Query: 296 V---DEAIKLIEKAISIDKSCMFAYETLGTIEVQRGRLEEAVKCFNKALPLARDEAE 349
           +   +EAIK  +KAI +D +  FAY   G  +   G  EEA++ F+KA+ L  D A+
Sbjct: 315 LELYEEAIKDYDKAIKLDPNYAFAYNNRGNAKDNLGLYEEAIEDFDKAIKLKPDYAD 371



 Score = 69.7 bits (169), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 74/273 (27%), Positives = 121/273 (44%), Gaps = 24/273 (8%)

Query: 266 EYFNRSIRVDPENASLYVHRAMLMLQARGNVDEAIKLIEKAISIDKSCMFAYETLGTIEV 325
           +Y++ +I+++P  A  Y ++A+   +  G + EAI+  +KAI +     +AY   G ++ 
Sbjct: 119 KYYDEAIKLNPNMADAYYNKAIAKTKL-GLLKEAIEEYDKAIELRADYTYAYYNRGLLKS 177

Query: 326 QRGRLEEAVKCFNKALPLARDEAELSHIYS----LRDAAIAQMKVCERYNIKKKVSPRSQ 381
             G LEEA+K F+KAL +   +  L   Y+    L D      +  + ++   K++P   
Sbjct: 178 DLGLLEEAIKDFDKALSI---DPNLFDAYNNKGLLEDELGFSKEAIKDFSKAIKLNPNYA 234

Query: 382 NITKNEKLAIKQLRENNDIIIRPADKGGKTVVMDKADYTQKMTSILNSND----YEIIPG 437
               N  +A   L      +   A K     +    +Y     S  N+ D    YE    
Sbjct: 235 LAYNNRGIAKDNLG-----LYEEAIKDYDKAIKLNPNYALAYNSRGNAKDNLGLYEEAIE 289

Query: 438 DPTKTI----EESEKYGNLENESGQKHAASDFTKAFADLDEAEKVDPNVADSYYQRGQIY 493
           D  K I    + ++ Y N  N    K+    + +A  D D+A K+DPN A +Y  RG   
Sbjct: 290 DFNKAIKLKPDNTDAYNNRGN---TKYNLELYEEAIKDYDKAIKLDPNYAFAYNNRGNAK 346

Query: 494 CLFGQYEEALRNLDKTIALNPNFHVARAQRHFV 526
              G YEEA+ + DK I L P++  A   R   
Sbjct: 347 DNLGLYEEAIEDFDKAIKLKPDYADAYNNRGLT 379



 Score = 58.2 bits (139), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 57/219 (26%), Positives = 101/219 (46%), Gaps = 20/219 (9%)

Query: 114 STKAIEDLTQLVEDTSVDPKIKVNAHIKRAVVHLHAASD----FTKAFADLDEAEKVDPN 169
           S +AI+D ++          IK+N +   A  +   A D    + +A  D D+A K++PN
Sbjct: 216 SKEAIKDFSKA---------IKLNPNYALAYNNRGIAKDNLGLYEEAIKDYDKAIKLNPN 266

Query: 170 VADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQRHFVVHKMIVPGDRERVEQ 229
            A +Y  RG      G YEEA+ + +K I L P+   A   R    + +      E  E+
Sbjct: 267 YALAYNSRGNAKDNLGLYEEAIEDFNKAIKLKPDNTDAYNNRGNTKYNL------ELYEE 320

Query: 230 SLKEFRNFVDTHSNVVEACTLFAQVLVDQEDFDGAEEYFNRSIRVDPENASLYVHRAMLM 289
           ++K++   +    N   A         +   ++ A E F+++I++ P+ A  Y +R  L 
Sbjct: 321 AIKDYDKAIKLDPNYAFAYNNRGNAKDNLGLYEEAIEDFDKAIKLKPDYADAYNNRG-LT 379

Query: 290 LQARGNVDEAIKLIEKAISIDKSCMFAYETLGTIEVQRG 328
            +  G  +EA+K  +KA+ +D S   A E +   + + G
Sbjct: 380 KENLGLYEEALKDYKKALKLDPSSECARENVKRTKEEYG 418



 Score = 40.0 bits (92), Expect = 3.0,   Method: Compositional matrix adjust.
 Identities = 22/68 (32%), Positives = 35/68 (51%)

Query: 459 KHAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHV 518
           K A  ++ +A    DEA K++PN+AD+YY +       G  +EA+   DK I L  ++  
Sbjct: 108 KSANGEYAEAIKYYDEAIKLNPNMADAYYNKAIAKTKLGLLKEAIEEYDKAIELRADYTY 167

Query: 519 ARAQRHFV 526
           A   R  +
Sbjct: 168 AYYNRGLL 175


>gi|365867838|ref|ZP_09407405.1| hypothetical protein SPW_7709 [Streptomyces sp. W007]
 gi|364002786|gb|EHM23959.1| hypothetical protein SPW_7709 [Streptomyces sp. W007]
          Length = 587

 Score = 78.2 bits (191), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 69/252 (27%), Positives = 119/252 (47%), Gaps = 12/252 (4%)

Query: 97  KALARLLRATVYIFTSQSTKAIEDLTQLVEDTSVDPKIKVNAHIKRAVVHLHAASDFTKA 156
           +A+A ++RA       +   A+ D  + +   +VDP+ +  AH  RAV+ L +   + +A
Sbjct: 333 RAVALVVRAWDRFRAGELDAALSDHARAI---AVDPRSE-RAHQGRAVI-LRSLGRYEEA 387

Query: 157 FADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQRHFVVH 216
            ADLD AE++ P  A +  +RG+ Y   G+ EEAL  LD+   L+P+  V    R  V H
Sbjct: 388 LADLDRAEEIAPAWAWAVRERGETYRRMGRLEEALTVLDRAHGLDPSDAVPLGSRGLVRH 447

Query: 217 KMIVPGDRERVEQSLKEFRNFVDTHSNVVEACTLFAQVLVDQEDFDGAEEYFNRSIRVDP 276
            +       R E++L +F   +        A    ++V     D  GA    +R+  + P
Sbjct: 448 VL------GRHEEALDDFDRAIALWPEYAWALVRRSRVRTVLGDPVGALADLDRAEELSP 501

Query: 277 ENASLYVHRAMLMLQARGNVDEAIKLIEKAISIDKSCMFAYETLGTIEVQRGRLEEAVKC 336
             A     R  +  +A G  +EA+   ++A+++D    +A+ +        GR+ EA+  
Sbjct: 502 GLAGTEGERGEVY-RATGRPEEAVACYDRALALDPDYAWAHGSRAIAHEALGRIPEALAD 560

Query: 337 FNKALPLARDEA 348
            ++AL L  D A
Sbjct: 561 LDRALELDPDYA 572



 Score = 55.5 bits (132), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 64/272 (23%), Positives = 111/272 (40%), Gaps = 50/272 (18%)

Query: 260 DFDGAEEYFNRSIRVDPENASLYVHRAMLMLQARGNVDEAIKLIEKAISIDKSCMFAYET 319
           + D A     R+I VDP +   +  RA+ +L++ G  +EA+  +++A  I  +  +A   
Sbjct: 349 ELDAALSDHARAIAVDPRSERAHQGRAV-ILRSLGRYEEALADLDRAEEIAPAWAWAVRE 407

Query: 320 LGTIEVQRGRLEEAVKCFNKALPLARDEAELSHIYSLRDAAIAQMKVCERYNIKKKVSPR 379
            G    + GRLEEA+   ++A           H     DA     +      + + V  R
Sbjct: 408 RGETYRRMGRLEEALTVLDRA-----------HGLDPSDAVPLGSR-----GLVRHVLGR 451

Query: 380 SQNITKNEKLAIKQLRENNDIIIRPADKGGKTVVMDKADYTQKMTSILNSNDYEIIPGDP 439
            +    +   AI    E    ++R                  ++ ++L         GDP
Sbjct: 452 HEEALDDFDRAIALWPEYAWALVR----------------RSRVRTVL---------GDP 486

Query: 440 TKTI-------EESEKYGNLENESGQKHAASDFTK-AFADLDEAEKVDPNVADSYYQRGQ 491
              +       E S      E E G+ + A+   + A A  D A  +DP+ A ++  R  
Sbjct: 487 VGALADLDRAEELSPGLAGTEGERGEVYRATGRPEEAVACYDRALALDPDYAWAHGSRAI 546

Query: 492 IYCLFGQYEEALRNLDKTIALNPNFHVARAQR 523
            +   G+  EAL +LD+ + L+P++  ARAQR
Sbjct: 547 AHEALGRIPEALADLDRALELDPDYAWARAQR 578



 Score = 47.0 bits (110), Expect = 0.026,   Method: Compositional matrix adjust.
 Identities = 24/62 (38%), Positives = 35/62 (56%)

Query: 465 FTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQRH 524
           + +A ADLD AE++ P  A +  +RG+ Y   G+ EEAL  LD+   L+P+  V    R 
Sbjct: 384 YEEALADLDRAEEIAPAWAWAVRERGETYRRMGRLEEALTVLDRAHGLDPSDAVPLGSRG 443

Query: 525 FV 526
            V
Sbjct: 444 LV 445


>gi|374815102|ref|ZP_09718839.1| chaperone protein DnaJ [Treponema primitia ZAS-1]
          Length = 489

 Score = 78.2 bits (191), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 62/226 (27%), Positives = 105/226 (46%), Gaps = 9/226 (3%)

Query: 121 LTQLVEDTSVDPKIKVNAHIKRAVVHLHAASDFTKAFADLDEAEKVDPNVADSYYQRGQI 180
           L ++ E   ++P   VNA++ R VV+     D+  A AD  EA K+DPN A +Y+ RG  
Sbjct: 240 LNEISEAIRINPNY-VNAYVARGVVY-ERKQDYDHAIADYTEAIKLDPNYAGTYFNRGNA 297

Query: 181 YCLFGQYEEALRNLDKTIALNPNFHVARAQRHFVVHKMIVPGDRERVEQSLKEFRNFVDT 240
           Y     Y+ A+ +    I L+PN+    A  H V  + IV G ++  + ++ +F   +  
Sbjct: 298 YEGKQDYDHAIADYTMAIRLDPNY----ANTHVV--RGIVYGYKQDYDHAIADFTEAIRL 351

Query: 241 HSNVVEACTLFAQVLVDQEDFDGAEEYFNRSIRVDPENASLYVHRAMLMLQARGNVDEAI 300
             +   A +  A     ++D+D A   +  +IR+DP  A  Y +R  +    + + D AI
Sbjct: 352 KPDYTSAYSNRAVTYNKKQDYDHAIADYTEAIRLDPNYAGTYFNRG-IAYGYKQDYDHAI 410

Query: 301 KLIEKAISIDKSCMFAYETLGTIEVQRGRLEEAVKCFNKALPLARD 346
               +AI +      AY   G     +   + A+  F +A+ L  D
Sbjct: 411 ADYTEAIRLKPDYTDAYNNRGGAYGYKQDYDHAIADFTEAIRLKPD 456



 Score = 49.7 bits (117), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 41/195 (21%), Positives = 85/195 (43%), Gaps = 7/195 (3%)

Query: 152 DFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQR 211
           ++  A  ++ EA +++PN  ++Y  RG +Y     Y+ A+ +  + I L+PN+      R
Sbjct: 235 NWDTALNEISEAIRINPNYVNAYVARGVVYERKQDYDHAIADYTEAIKLDPNYAGTYFNR 294

Query: 212 HFVVHKMIVPGDRERVEQSLKEFRNFVDTHSNVVEACTLFAQVLVDQEDFDGAEEYFNRS 271
                       ++  + ++ ++   +    N      +   V   ++D+D A   F  +
Sbjct: 295 GNAYEG------KQDYDHAIADYTMAIRLDPNYANTHVVRGIVYGYKQDYDHAIADFTEA 348

Query: 272 IRVDPENASLYVHRAMLMLQARGNVDEAIKLIEKAISIDKSCMFAYETLGTIEVQRGRLE 331
           IR+ P+  S Y +RA +    + + D AI    +AI +D +    Y   G     +   +
Sbjct: 349 IRLKPDYTSAYSNRA-VTYNKKQDYDHAIADYTEAIRLDPNYAGTYFNRGIAYGYKQDYD 407

Query: 332 EAVKCFNKALPLARD 346
            A+  + +A+ L  D
Sbjct: 408 HAIADYTEAIRLKPD 422



 Score = 46.6 bits (109), Expect = 0.035,   Method: Compositional matrix adjust.
 Identities = 58/261 (22%), Positives = 109/261 (41%), Gaps = 15/261 (5%)

Query: 295 NVDEAIKLIEKAISIDKSCMFAYETLGTIEVQRGRLEEAVKCFNKALPLARDEAEL---- 350
           N D A+  I +AI I+ + + AY   G +  ++   + A+  + +A+ L  + A      
Sbjct: 235 NWDTALNEISEAIRINPNYVNAYVARGVVYERKQDYDHAIADYTEAIKLDPNYAGTYFNR 294

Query: 351 SHIYSLR---DAAIAQMKVCERYNIKKKVSPRSQNITKNEKLAIKQLRENNDIIIRPADK 407
            + Y  +   D AIA       Y +  ++ P   N T   +  +   +++ D  I    +
Sbjct: 295 GNAYEGKQDYDHAIAD------YTMAIRLDPNYAN-THVVRGIVYGYKQDYDHAIADFTE 347

Query: 408 GGKTVVMDKADYTQKMTSILNSNDYEIIPGDPTKTIEESEKY-GNLENESGQKHAASDFT 466
             +      + Y+ +  +     DY+    D T+ I     Y G   N         D+ 
Sbjct: 348 AIRLKPDYTSAYSNRAVTYNKKQDYDHAIADYTEAIRLDPNYAGTYFNRGIAYGYKQDYD 407

Query: 467 KAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQRHFV 526
            A AD  EA ++ P+  D+Y  RG  Y     Y+ A+ +  + I L P++  A   R  V
Sbjct: 408 HAIADYTEAIRLKPDYTDAYNNRGGAYGYKQDYDHAIADFTEAIRLKPDYTDAYNNRGNV 467

Query: 527 WTSTLAELMAFSDEFMIPKIT 547
           + +  A+ +A +D  M  +++
Sbjct: 468 YKAKGAQSLAAADYAMAKQLS 488



 Score = 43.5 bits (101), Expect = 0.26,   Method: Compositional matrix adjust.
 Identities = 39/140 (27%), Positives = 61/140 (43%), Gaps = 8/140 (5%)

Query: 75  EDYLTAIRHCTEEIESTSSNHTKALARLLRATVYIFTSQSTKAIEDLTQLVEDTSVDPKI 134
           +DY  AI   TE I     ++T A +   RA  Y        AI D T+ +    +DP  
Sbjct: 336 QDYDHAIADFTEAIR-LKPDYTSAYSN--RAVTYNKKQDYDHAIADYTEAIR---LDPNY 389

Query: 135 KVNAHIKRAVVHLHAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNL 194
               +  R + + +   D+  A AD  EA ++ P+  D+Y  RG  Y     Y+ A+ + 
Sbjct: 390 -AGTYFNRGIAYGYK-QDYDHAIADYTEAIRLKPDYTDAYNNRGGAYGYKQDYDHAIADF 447

Query: 195 DKTIALNPNFHVARAQRHFV 214
            + I L P++  A   R  V
Sbjct: 448 TEAIRLKPDYTDAYNNRGNV 467


>gi|359461395|ref|ZP_09249958.1| pentapeptide repeat-containing serine/threonine kinase
           [Acaryochloris sp. CCMEE 5410]
          Length = 699

 Score = 78.2 bits (191), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 69/279 (24%), Positives = 121/279 (43%), Gaps = 21/279 (7%)

Query: 65  LSKAKRAFEHEDYLTAIRHCTEEIESTSSNHTKALARLLRATVYIFTSQSTKAIEDLTQL 124
           L +  + F   DY  A+R     I+    N          A  +  +  + + + DL   
Sbjct: 415 LQQGDQKFAQGDYQRALREYAAAIQKDPEN----------AEAHFNSGITKRRLNDLKGS 464

Query: 125 VEDTSVDPKIK---VNAHIKRAVVHLHAASDFTKAFADLDEAEKVDPNVADSYYQRGQIY 181
           +   +   ++K   V+A+  R +V      D   A AD  EA +++P    +Y  RG IY
Sbjct: 465 IAHYTTAIRLKPTSVDAYNNRGLVR-SELGDKLAAIADFTEAIRLNPQHVQAYNNRGTIY 523

Query: 182 CLFGQYEEALRNLDKTIALNPNFHVARAQRHFVVHKMIVPGDRERVEQSLKEFRNFVDTH 241
              G+ + A+ +  + I ++  ++ A   R       IV  D    + ++ ++   +  +
Sbjct: 524 SEVGKKQAAIADYSQAIQIDAQYYEAYFNRG------IVQSDLGNTKAAIADYSQVIRLN 577

Query: 242 SNVVEACTLFAQVLVDQEDFDGAEEYFNRSIRVDPENASLYVHRAMLMLQARGNVDEAIK 301
           SN  +A        V+  +   A   + ++IRVDP+ A  Y +R    L   GN   AI 
Sbjct: 578 SNYAQAYNNRGIAYVNLGNLKNAIADYTQAIRVDPKYARAYTNRGTAQL-TLGNKQAAIA 636

Query: 302 LIEKAISIDKSCMFAYETLGTIEVQRGRLEEAVKCFNKA 340
              +AI ID +   AYE  GT++ Q G+ +EA++   KA
Sbjct: 637 DYTQAIDIDSTYAKAYENRGTVKGQLGKKQEAIQDLQKA 675



 Score = 40.4 bits (93), Expect = 2.4,   Method: Compositional matrix adjust.
 Identities = 61/249 (24%), Positives = 105/249 (42%), Gaps = 34/249 (13%)

Query: 260 DFDGAEEYFNRSIRVDPENASLYVHRAMLMLQARGNVDEAIKLIEKAISIDKSCMFAYET 319
           D  G+  ++  +IR+ P +   Y +R ++  +  G+   AI    +AI ++   + AY  
Sbjct: 460 DLKGSIAHYTTAIRLKPTSVDAYNNRGLVRSEL-GDKLAAIADFTEAIRLNPQHVQAYNN 518

Query: 320 LGTIEVQRGRLEEAVKCFNKALPLARDEAELSHIYSLRDAAIAQMKVCERYNIKKKVSPR 379
            GTI  + G+ + A+  +++A+ +   +A+    Y  R   I Q  +    N K  ++  
Sbjct: 519 RGTIYSEVGKKQAAIADYSQAIQI---DAQYYEAYFNR--GIVQSDLG---NTKAAIADY 570

Query: 380 SQNITKNEKLAIKQLRENNDIIIRPADKGGKTVVMDKADYTQKMTSILNSNDYEIIPGDP 439
           SQ I  N   A    +  N+  I   + G     +  ADYTQ +              DP
Sbjct: 571 SQVIRLNSNYA----QAYNNRGIAYVNLGNLKNAI--ADYTQAIRV------------DP 612

Query: 440 TKTIEESEKYGNLENESGQKHAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQY 499
            K        G  +   G K AA       AD  +A  +D   A +Y  RG +    G+ 
Sbjct: 613 -KYARAYTNRGTAQLTLGNKQAA------IADYTQAIDIDSTYAKAYENRGTVKGQLGKK 665

Query: 500 EEALRNLDK 508
           +EA+++L K
Sbjct: 666 QEAIQDLQK 674


>gi|449068029|ref|YP_007435111.1| hypothetical protein SacN8_10065 [Sulfolobus acidocaldarius N8]
 gi|449070302|ref|YP_007437383.1| hypothetical protein SacRon12I_10085 [Sulfolobus acidocaldarius
           Ron12/I]
 gi|449036537|gb|AGE71963.1| hypothetical protein SacN8_10065 [Sulfolobus acidocaldarius N8]
 gi|449038810|gb|AGE74235.1| hypothetical protein SacRon12I_10085 [Sulfolobus acidocaldarius
           Ron12/I]
          Length = 420

 Score = 78.2 bits (191), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 90/400 (22%), Positives = 179/400 (44%), Gaps = 76/400 (19%)

Query: 139 HIKRAVVHLHAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQ-----------Y 187
           H  R + + +  +++++A  + DEA +++P  ADS+Y +        +           Y
Sbjct: 48  HFNRGLAYFNL-NNYSEAIREFDEAIRLNPFHADSHYYKALSLIALQRSGSVNAGISDLY 106

Query: 188 EEALRNLDKTIAL---NPNFHVARAQRHFVVHKMIVPGDRERVEQSLKEFRNFVDTHSNV 244
           E A+   D+ I +   NP +H  +     ++          R  ++L E+++ +  +   
Sbjct: 107 ERAILEFDEAIKIDPKNPEYHYQKGLALEILG---------RQYEALLEYQDAIKLNPRN 157

Query: 245 VEACTLFAQVLVDQEDFDGAEEYFNRSIRVDPENASLYVHRAMLMLQARGNVDEAIKLIE 304
            E     A +L DQE +  A    + +IR++P+N++ Y  +A+L L++ G + EA+  ++
Sbjct: 158 PEYYYRKAIILQDQEKYVDAIAEVDTAIRLNPKNSTYYFRKALL-LKSMGKLKEALDQLD 216

Query: 305 KAISIDKSCMFAYETLGTIEVQRGRLEEAVKCFNKALPLARDEAELSHIYSLRDAAIAQM 364
           KAIS++      Y   G I  +  R ++ +K ++ A+ L+ +  E    Y  R   +   
Sbjct: 217 KAISLNPQVAEYYHQKGLILKELKRYDDVLKDYDNAIKLSPNNPE----YHFRKGVL--- 269

Query: 365 KVCERYNIKKKVSPRSQNITKNEKLAIKQLRENNDIIIRPADKGGKTVVMDKADYTQKM- 423
                             + K EK A+ +L E+  + + P          +  +Y  ++ 
Sbjct: 270 ---------------YYELGKYEK-AVMELEES--VRLNP----------NNPEYHYQLG 301

Query: 424 TSILNSNDYEIIPGDPTKTIEESEKYGNLENESGQKH--------AASDFTKAFADLDEA 475
            ++ +   YE         +EE +K   L+ ++ Q +        A   + KA  + D+A
Sbjct: 302 LALFHVMMYE-------DAVEEFDKAVKLDPQNPQYYYYKGNALKALWKYDKAIKEYDKA 354

Query: 476 EKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPN 515
             ++PN    +YQ+G +    G+YEEA+  LD+ I LNP+
Sbjct: 355 ISLNPNDPLPHYQKGVVLKTLGKYEEAIVELDEAIKLNPD 394



 Score = 77.0 bits (188), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 57/220 (25%), Positives = 109/220 (49%), Gaps = 7/220 (3%)

Query: 127 DTSVDPKIKVNAHIKRAVVHLHAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQ 186
           DT++    K + +  R  + L +     +A   LD+A  ++P VA+ Y+Q+G I     +
Sbjct: 182 DTAIRLNPKNSTYYFRKALLLKSMGKLKEALDQLDKAISLNPQVAEYYHQKGLILKELKR 241

Query: 187 YEEALRNLDKTIALNPNFHVARAQRHFVVHKMIVPGDRERVEQSLKEFRNFVDTHSNVVE 246
           Y++ L++ D  I L+PN      + HF   K ++  +  + E+++ E    V  + N  E
Sbjct: 242 YDDVLKDYDNAIKLSPN----NPEYHF--RKGVLYYELGKYEKAVMELEESVRLNPNNPE 295

Query: 247 ACTLFAQVLVDQEDFDGAEEYFNRSIRVDPENASLYVHRAMLMLQARGNVDEAIKLIEKA 306
                   L     ++ A E F++++++DP+N   Y ++    L+A    D+AIK  +KA
Sbjct: 296 YHYQLGLALFHVMMYEDAVEEFDKAVKLDPQNPQYYYYKGN-ALKALWKYDKAIKEYDKA 354

Query: 307 ISIDKSCMFAYETLGTIEVQRGRLEEAVKCFNKALPLARD 346
           IS++ +    +   G +    G+ EEA+   ++A+ L  D
Sbjct: 355 ISLNPNDPLPHYQKGVVLKTLGKYEEAIVELDEAIKLNPD 394



 Score = 57.4 bits (137), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 92/390 (23%), Positives = 157/390 (40%), Gaps = 64/390 (16%)

Query: 159 DLDEAEKVDPNVADSY---YQRGQIYCLFGQYEEALRNLDKTIALNP---NFHVARAQRH 212
           + DE  + +P+    Y   + RG  Y     Y EA+R  D+ I LNP   + H  +A   
Sbjct: 30  NYDEMGEQNPSQDQGYLYHFNRGLAYFNLNNYSEAIREFDEAIRLNPFHADSHYYKALSL 89

Query: 213 FVVHKM--IVPGDRERVEQSLKEFRNFVDTHSNVVE---ACTLFAQVLVDQEDFDGAEEY 267
             + +   +  G  +  E+++ EF   +       E      L  ++L  Q  ++   EY
Sbjct: 90  IALQRSGSVNAGISDLYERAILEFDEAIKIDPKNPEYHYQKGLALEILGRQ--YEALLEY 147

Query: 268 FNRSIRVDPENASLYVHRAMLMLQARGNVDEAIKLIEKAISIDKSCMFAYETLGTIEVQR 327
              +I+++P N   Y  +A+++      VD AI  ++ AI ++      Y     +    
Sbjct: 148 -QDAIKLNPRNPEYYYRKAIILQDQEKYVD-AIAEVDTAIRLNPKNSTYYFRKALLLKSM 205

Query: 328 GRLEEAVKCFNKALPLARDEAELSHIYSLRDAAIAQMKVCERYNIKKKVSPRSQNITKNE 387
           G+L+EA+   +KA+ L    AE  H   L       +K  +RY+          ++ K+ 
Sbjct: 206 GKLKEALDQLDKAISLNPQVAEYYHQKGL------ILKELKRYD----------DVLKDY 249

Query: 388 KLAIKQLRENNDIIIRPADKGGKTVVMDKADYTQKMTSILNSNDYEIIPGDPTKTIEESE 447
             AIK L  NN     P     K V+                  YE+  G   K + E E
Sbjct: 250 DNAIK-LSPNN-----PEYHFRKGVLY-----------------YEL--GKYEKAVMELE 284

Query: 448 KYGNLENESGQKHAASD--------FTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQY 499
           +   L   + + H            +  A  + D+A K+DP     YY +G       +Y
Sbjct: 285 ESVRLNPNNPEYHYQLGLALFHVMMYEDAVEEFDKAVKLDPQNPQYYYYKGNALKALWKY 344

Query: 500 EEALRNLDKTIALNPNFHVARAQRHFVWTS 529
           ++A++  DK I+LNPN  +   Q+  V  +
Sbjct: 345 DKAIKEYDKAISLNPNDPLPHYQKGVVLKT 374


>gi|427419274|ref|ZP_18909457.1| tetratricopeptide repeat protein [Leptolyngbya sp. PCC 7375]
 gi|425761987|gb|EKV02840.1| tetratricopeptide repeat protein [Leptolyngbya sp. PCC 7375]
          Length = 510

 Score = 78.2 bits (191), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 92/381 (24%), Positives = 155/381 (40%), Gaps = 59/381 (15%)

Query: 156 AFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQRHFVV 215
           A  + + A  + P+ A SY  RG  +      E AL N ++ I+++ N+  A   R  + 
Sbjct: 106 AIEEFNAAINLKPDFAPSYLFRGAAFARLENTEAALDNYNQAISIDANYSTAYLNRGILY 165

Query: 216 HKMIVPGDRERVEQSLKEFRNFVDTHSNVVEACTLFAQVLVDQEDFDGAEEYFNRSIRVD 275
           +      D  R + +  +F   + T      A      +  +Q +   A EY N ++++D
Sbjct: 166 Y------DLGRTDLATTDFERTIATDPESANAYIYLGLIASEQGNQQIALEYLNDAVQLD 219

Query: 276 PENASLYVHRAMLMLQARGNVDEAIKLIEKAISIDKSCMFAYETLGTIEVQRGRLEEAVK 335
           P NAS Y HR  L+ +A  +   AI    ++I +D      +   G      G   EA++
Sbjct: 220 PSNASAYFHRG-LVFKALNSPASAISDFTQSIELDDDNAATFINRGATYYTVGDTREALQ 278

Query: 336 CFNKALPLARDEAELSHIYSLRDAAIAQMKVCERYNIKKKVSPRSQNITKNEKLAIKQLR 395
            FN+A+ +  DE  +   Y+   A I++ +            P++         AI  L 
Sbjct: 279 DFNEAIDI--DENNVEAYYNRSFALISEAR------------PQA---------AIADL- 314

Query: 396 ENNDIIIRPADKGGKTV-------VMDKADYTQKMTSILNSNDYEIIPGDPTKTIEESEK 448
            N  + + P +     V         + AD     + +L     E+ P     + E   +
Sbjct: 315 -NQVLTLEPGNADAYLVRGQVFASSSNTADAINDFSKVL-----ELSP----DSAEAYYR 364

Query: 449 YGNLENESGQKHAA-SDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLD 507
            GN   E+G++ AA SD+T A A       +DP  A SY  RG  +   G    AL +  
Sbjct: 365 RGNAYLEAGEQQAAISDYTAALA-------LDPEHAPSYKYRGDAFADLGDSFSALSDYS 417

Query: 508 KTIALNP---NFHVARAQRHF 525
             I LN    N + +R + H+
Sbjct: 418 TAINLNSAYWNAYASRGRMHY 438



 Score = 45.1 bits (105), Expect = 0.11,   Method: Compositional matrix adjust.
 Identities = 62/295 (21%), Positives = 119/295 (40%), Gaps = 34/295 (11%)

Query: 262 DGAEEYFNRSIRVDPENASLYVHRAMLMLQARGNVDEAIKLIEKAISIDKSCMFAYETLG 321
           + A E FN +I + P+ A  Y+ R     +   N + A+    +AISID +   AY   G
Sbjct: 104 EAAIEEFNAAINLKPDFAPSYLFRGAAFARLE-NTEAALDNYNQAISIDANYSTAYLNRG 162

Query: 322 TIEVQRGRLEEAVKCFNKALPLARDEAELSHIY-SLRDAAIAQMKVCERY-NIKKKVSPR 379
            +    GR + A   F + +    + A  ++IY  L  +     ++   Y N   ++ P 
Sbjct: 163 ILYYDLGRTDLATTDFERTIATDPESAN-AYIYLGLIASEQGNQQIALEYLNDAVQLDPS 221

Query: 380 SQNITKNEKLAIKQLRENNDIIIRPADKGGKTVVMDKADYTQKM-------TSILNSNDY 432
           + +   +  L  K L         PA           +D+TQ +        + +N    
Sbjct: 222 NASAYFHRGLVFKALNS-------PASA--------ISDFTQSIELDDDNAATFINRGAT 266

Query: 433 EIIPGDPTKTIEESEKYGNLENESGQKHAASDFT--------KAFADLDEAEKVDPNVAD 484
               GD  + +++  +  +++  + + +    F          A ADL++   ++P  AD
Sbjct: 267 YYTVGDTREALQDFNEAIDIDENNVEAYYNRSFALISEARPQAAIADLNQVLTLEPGNAD 326

Query: 485 SYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQRHFVWTSTLAELMAFSD 539
           +Y  RGQ++       +A+ +  K + L+P+   A  +R   +     +  A SD
Sbjct: 327 AYLVRGQVFASSSNTADAINDFSKVLELSPDSAEAYYRRGNAYLEAGEQQAAISD 381



 Score = 41.6 bits (96), Expect = 1.1,   Method: Compositional matrix adjust.
 Identities = 47/207 (22%), Positives = 96/207 (46%), Gaps = 14/207 (6%)

Query: 104 RATVYIFTSQSTKAIEDLTQLVEDTSVDPKIKVNAHIKRAVVHLHAASDFTKAFADLDEA 163
           R+   I  ++   AI DL Q++   +++P    +A++ R  V   ++S+   A  D  + 
Sbjct: 297 RSFALISEARPQAAIADLNQVL---TLEPG-NADAYLVRGQV-FASSSNTADAINDFSKV 351

Query: 164 EKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQRHFVVHKMIVPGD 223
            ++ P+ A++YY+RG  Y   G+ + A+ +    +AL+P    +   R      +   GD
Sbjct: 352 LELSPDSAEAYYRRGNAYLEAGEQQAAISDYTAALALDPEHAPSYKYRGDAFADL---GD 408

Query: 224 RERVEQSLKEFRNFVDTHSNVVEACTLFAQVLVDQEDFDGAEEYFNRSIRVDPENASLYV 283
                 +L ++   ++ +S    A     ++  +  D+  A   F+  I  +  +A ++ 
Sbjct: 409 S---FSALSDYSTAINLNSAYWNAYASRGRMHYESGDYQSAYTDFSAVITANVLDADVFY 465

Query: 284 HRAMLMLQAR-GNVDEAIKLIEKAISI 309
           +R   +  AR GN   A+  +EKA S+
Sbjct: 466 YRG--ITNARMGNRRAAVTDLEKAGSL 490



 Score = 39.7 bits (91), Expect = 4.6,   Method: Compositional matrix adjust.
 Identities = 31/125 (24%), Positives = 58/125 (46%), Gaps = 8/125 (6%)

Query: 79  TAIRHCTEEIESTSSNHTKALARLLRATVYIFTSQSTKAIEDLTQLVEDTSVDPKIKVNA 138
           +AI   T+ IE    N   A   + R   Y     + +A++D  + ++   +D    V A
Sbjct: 241 SAISDFTQSIELDDDN---AATFINRGATYYTVGDTREALQDFNEAID---IDEN-NVEA 293

Query: 139 HIKRAVVHLHAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTI 198
           +  R+   +  A     A ADL++   ++P  AD+Y  RGQ++       +A+ +  K +
Sbjct: 294 YYNRSFALISEARP-QAAIADLNQVLTLEPGNADAYLVRGQVFASSSNTADAINDFSKVL 352

Query: 199 ALNPN 203
            L+P+
Sbjct: 353 ELSPD 357


>gi|154150715|ref|YP_001404333.1| hypothetical protein Mboo_1172 [Methanoregula boonei 6A8]
 gi|153999267|gb|ABS55690.1| TPR repeat-containing protein [Methanoregula boonei 6A8]
          Length = 4079

 Score = 78.2 bits (191), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 96/447 (21%), Positives = 187/447 (41%), Gaps = 57/447 (12%)

Query: 73   EHEDYLTAIRHCTEEIESTSS---NHTKALARLLRATVYIFTSQSTKAIEDLTQLVEDTS 129
            E E+ L    H   + ES ++   N  +AL  L R      T ++  AIE +  +  +++
Sbjct: 3625 EFEEALDCYNHALAQNESYATALLNKGRALIHLER------TGEALAAIEKVLTIQPESA 3678

Query: 130  VDPKIKVNAHIKRAVVHLHAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEE 189
                 K  AH+ R         D   AF   + A  ++   A+++Y +G      GQYEE
Sbjct: 3679 DAFYYKGRAHLNR-----RQDDDAIDAF---NRALAINRQFAEAHYYKGTALARKGQYEE 3730

Query: 190  ALRNLDKTIALNPNFHVARAQRHFVVHKMIVPGDRERVEQSLKEFRNFVDTHSNVVEACT 249
            A+   D  + +  ++  A  ++   +  +      ER +++L  +   +  +    EA  
Sbjct: 3731 AVAAFDAALRIKSDYPEAFYEKGRALFHL------ERSKEALAAYDQALSANPGYAEAIF 3784

Query: 250  LFAQVLVDQEDFDGAEEYFNRSIRVDPENASLYVHRAMLMLQARGNVDEAIKLIEKAISI 309
               +  +  ++ DGA   F+R++ V+P     +  +A  +    G+ D AI   ++AI+I
Sbjct: 3785 QKGRTYITLQNPDGAIRSFDRALEVNPSCFQAHYWKARTLYD-EGSYDAAITEYDRAIAI 3843

Query: 310  DKSCMFAYETLGTIEVQRGRLEEAVKCFNKALPLARDEAELSHIYSLRDAAIAQMKVCER 369
                   Y   G       +  EA+K ++KAL L    A+    +S + +++A++ +   
Sbjct: 3844 KPDRPELYRDRGLAYAAIDQYREAIKSYDKALELDTHGAD---AFSHKGSSLAELGM--- 3897

Query: 370  YNIKKKVSPRSQNITKNEKLAIKQLRENNDIIIRPADKGGKTVVMDKADYTQKMTSILNS 429
               +  +    + I K+ +LA     + N             V+ D   +T+   +    
Sbjct: 3898 --YRDALEAFEKAIEKDPELATSWFGKGN-------------VLYDLGKFTEACAAYD-- 3940

Query: 430  NDYEIIPGDPTKTIEESEKYGNLENESGQKHAASDFTKAFADLDEAEKVDPNVADSYYQR 489
               E +  DP   +  + +  +L   +  K A   + +A A       +DP+ + +Y+ R
Sbjct: 3941 ---EGLRRDPENAVGWTRRGMSLAGLNDHKAAIESYDRALA-------IDPSFSIAYFTR 3990

Query: 490  GQIYCLFGQYEEALRNLDKTIALNPNF 516
            G  +   GQ+EEA  +    I+L P+F
Sbjct: 3991 GSAFEALGQFEEAEASFRAMISLQPDF 4017



 Score = 76.3 bits (186), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 82/366 (22%), Positives = 153/366 (41%), Gaps = 51/366 (13%)

Query: 154  TKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQRHF 213
             KAF   D A ++DP  +D+ + +G+     G + EA++  DKT+ +  N+    A  +F
Sbjct: 3256 VKAF---DAALEIDPVFSDALFAKGKALLTLGMFREAVKTFDKTLLIEKNY----AGVYF 3308

Query: 214  VVHKMIVPGDRERVEQSLKEFRNFVDTHSNVVEACTLFAQVLVDQEDFDGAEEYFNRSIR 273
              HK +   +  R ++++  F   +D  +   +A       L        A E F+  I+
Sbjct: 3309 --HKGLALAELGRHDEAITAFDKDIDLDAGNNDAFYHKGVSLAATGKLTNAMEAFDHVIQ 3366

Query: 274  VDPENASLYVHRAMLMLQARGNVDEAIKLIEKAISIDKSCMFAYETLGTIEVQRGRLEEA 333
             DP +   ++HR M +    G  ++AI   +KA+ I  +   A+  +G         +EA
Sbjct: 3367 ADPGSVQGWLHRGMALFDL-GRFNDAISSYKKALEIGPTNADAWYLVGRSYYALNTYDEA 3425

Query: 334  VKCFNKALPLARDEAELSHIYSLRDAAIAQM----KVCERYNIKKKVSPRSQNITKNEKL 389
            +  F++AL L   + E +  +  +   +  M    +    Y+    + P+      ++ +
Sbjct: 3426 IAAFDRALDL---QGEFAEAWYYKGRTLFAMGKYGEAVSAYDSTLVLRPKHDEAFYHKGM 3482

Query: 390  AIKQLRENNDIIIRPADKGGKTVVMDKADYTQKMTSILNSNDYEIIPGDPTKTIEESEKY 449
            A+ +L+   D +               + + Q +   L  N   I  G          K 
Sbjct: 3483 ALLKLQRAGDAV---------------SAFDQALR--LRPNFSYIWTG----------KG 3515

Query: 450  GNLENESGQKHAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKT 509
              L      K A S +TKA A       +D   + +YYQ G  Y   G+Y++A+RN + T
Sbjct: 3516 MALAALDRHKDAISCYTKAIA-------LDRKDSRAYYQAGLSYLSLGRYQDAIRNFEAT 3568

Query: 510  IALNPN 515
            +  +P+
Sbjct: 3569 LVQHPS 3574



 Score = 75.1 bits (183), Expect = 9e-11,   Method: Compositional matrix adjust.
 Identities = 86/399 (21%), Positives = 167/399 (41%), Gaps = 28/399 (7%)

Query: 136  VNAHIKRAVVHLHAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLD 195
              AH  + +  L A     KA      A + DP+++D+ +  G  Y    +Y  AL   D
Sbjct: 2420 AQAHYHKGLA-LFALGKNEKAIRSFTHALEHDPSLSDALFHTGLAYAALSRYSPALSAFD 2478

Query: 196  KTIALNPNFHVARAQRHFVVHKMIVPGDRERVEQSLKEFRNFVDTHSNVVEACTLFAQVL 255
            K +   P    A  Q+  ++ K+  P      +++L      +   +N+ +   L   VL
Sbjct: 2479 KLLESGPQNAEALFQKGRMLAKLGRP------DEALAVLETSLGLENNIADVWLLKGSVL 2532

Query: 256  VDQEDFDGAEEYFNRSIRVDPENASLYVHRAMLMLQARGNVDEAIKLIEKAISIDKSCMF 315
            ++QE  + A E F+R++ + PEN + + +R            EAI+  ++ ++ D  C  
Sbjct: 2533 LEQERLEDALEVFDRALALTPENNAAW-YRKGKAFSGLHRYPEAIQCFDRVVTSDTGCAQ 2591

Query: 316  AYETLGTIEVQRGRLEEAVKCFNKALPLARDEAELSHIYSLRDAAIAQMKVCER----YN 371
            A+   G+  +  G L  A++   KAL L  D A   + +  R  A+A +   E     Y+
Sbjct: 2592 AWFRKGSALLSNGDLRAAIEALTKALELKPDNA---NGWYDRAVALAGLGRYEESIPSYD 2648

Query: 372  IKKKVSPRSQNITKNEKLAIKQLRENNDIIIRPADKGGKTVVMDKA-DYTQKMTSI--LN 428
                ++P+  +   ++  A+ +L  +   I   A +    +  + A  Y +K  ++  L+
Sbjct: 2649 RALSLNPKYTSAYFDKGSALSRLGRDRQAI--EAFEMASAIDPEFAVAYLEKGLALARLS 2706

Query: 429  SNDYEIIPGDPTKTIEESEKYGNLENESGQKHAASDFTKAFADLDEAEKVDPNVADSYYQ 488
             N   +   D T  ++ +     L N+         F  A    D A ++D    ++++ 
Sbjct: 2707 KNKEAVAAFDATLALDPA-NVPALFNKGLALANLKKFADAITVFDAALRIDAKHYEAWFA 2765

Query: 489  RGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQRHFVW 527
            +G        Y++A+   D  +A++P        R+ VW
Sbjct: 2766 KGYAQSRLRHYDDAVGAFDHALAIDPG-------RYAVW 2797



 Score = 68.6 bits (166), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 84/381 (22%), Positives = 162/381 (42%), Gaps = 44/381 (11%)

Query: 153 FTKAFADLDEAEKVDPNVADSYYQRGQIYCL-FGQYEEALRNLDKTIALNPNFHVARAQR 211
           + +A AD D A   +P  AD+ Y RG + C+   +Y+E+L   D+ +A   +   A   R
Sbjct: 328 YREAVADFDRALAAEPENADALYSRG-VSCIHLSRYDESLSVFDRILASQGDHAGASYFR 386

Query: 212 HFVVHKMIVPGDRERVEQSLKEFRNFVDTHSNVVEACTLFAQVLVDQEDFDGAEEYFNRS 271
             V+ ++       R ++++  F + +        A             +  A   ++R+
Sbjct: 387 GVVLSRL------GRQDEAISAFEHTLAIDPGCASAAYQIGLASASLGRYSDAVAAYDRA 440

Query: 272 IRVDPENASLYVHRAMLMLQARGNVDEAIKLIEKAISIDKSCMFAYETLGTIEVQRGRLE 331
           +++ P+      H+    L   GN ++A+   ++A++ +     AY   G + V+ GRLE
Sbjct: 441 LKIRPDYPDAVYHKG-FALAKLGNSEDALLEFDRALTENPGNAPAYHQKGQLLVRTGRLE 499

Query: 332 EAVKCFNKALPLARDEAELSHIYSLRDAAIAQMK----VCERYNIKKKVSPRSQNITKNE 387
           EA++  NK++ L  D A+   +Y  + +A+ + +      E ++    + P   N   N+
Sbjct: 500 EALEALNKSIALKPDNAQ---VYYDKGSALLKAERFGPALEAFDQAIGIYPNYVNAYYNK 556

Query: 388 KLAIKQ--LRE------NNDIIIRPADKGGKTVVMDKADYTQKMTSILN------SNDYE 433
            +A  +  +R+      ++ I I P      T+ +    +   M S L       +    
Sbjct: 557 GIAFSRTGMRKEALEAFDHAIAIDPT----HTLAL---YHRGTMLSGLGRYADAAAAYDA 609

Query: 434 IIPGDPTKTIEESEKYGNLENESGQKHAASDFTKAFADLDEAEKVDPNVADSYYQRGQIY 493
           ++   P  T    EK   L   S  K AA  F +A        + DP + D++   G   
Sbjct: 610 VLALSPQNTSALYEKGVALMQLSRWKDAAEAFGQAV-------EQDPGLIDAWLAFGTCN 662

Query: 494 CLFGQYEEALRNLDKTIALNP 514
              G++ +A+   D+ IAL+P
Sbjct: 663 ANLGKFPDAIAAFDRVIALSP 683



 Score = 68.2 bits (165), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 105/485 (21%), Positives = 191/485 (39%), Gaps = 44/485 (9%)

Query: 68   AKRAFEHEDYLTAIRHCTEEIESTSSNHTKALARLLRATVYIFTSQSTKAIEDLTQLVED 127
            A+  F   DY   I  C   +     N   A A L R        +  +A+E L +  + 
Sbjct: 1645 ARARFSLGDYTEVIEACDHALRF---NADSAEALLYRGLAQYELGRYEEAVESLARAEQ- 1700

Query: 128  TSVDPKIKVNAHIKRAVVHLHAA----SDFTKAFADLDEAEKVDPNVADSYYQRGQIYCL 183
                    +++H+++AV HL AA      +  A    D    + P+ A +++ RG     
Sbjct: 1701 --------IDSHLEQAVYHLGAALLKLERYGDAIPAFDRVLSLKPDQATAHHLRGVALAA 1752

Query: 184  FGQYEEALRNLDKTIALNPNFHVARAQRHFVVHKMIVPGDRERVEQSLKEFRNFVDTHSN 243
             G Y EA+ + +  +  +P    +   +   +H +       R E+S+      +    +
Sbjct: 1753 QGMYPEAISSFENALRYDPRSAESALNKAIALHSL------GRDEESILASDIALGIQPD 1806

Query: 244  VVEACTLFAQVLVDQEDFDGAEEYFNRSIRVDPENASLYVHRAMLMLQARGNVDEAIKLI 303
              EA       L   + +  A   F+RS+ +D      +    + +++ +   +EA    
Sbjct: 1807 FAEAWYYKGVALETLKRYADAVPAFSRSLELDSTTTHAWFEMGLCLVELQ-RYEEAAGAF 1865

Query: 304  EKAISIDKSCMFAYETLGTIEVQRGRLEEAVKCFNKALPLARDEAELSHIYSLRDAAIAQ 363
            +  + +      AY   G      G+ EEAV  F+ AL +   +A    + S +  A+  
Sbjct: 1866 DHVLGLVSDYPPAYFHKGRALALLGKYEEAVVAFDSALAITPGDA---IVLSAKGHALES 1922

Query: 364  MK----VCERYNIKKKVSPRSQNITKNEKLA-IKQLRENNDIIIRPADKGGKTVVMDKAD 418
            +K        +     V+P + +   +  LA I+Q R+   I         KT+ +D  +
Sbjct: 1923 LKKYREAAAAFEEATSVNPAAADDYYHLGLAYIEQHRDEKAIAAF-----AKTLRIDPEN 1977

Query: 419  ---YTQKMTSILNSNDYEIIPGDPTKTIEESEKYGNLENESGQKH-AASDFTKAFADLDE 474
                 Q    +     Y+   G   + +E  ++   +  E G  + A   +++A A  D 
Sbjct: 1978 PDALFQAGIVLARLEKYDEAIGLFDRYLELGKENAGILYERGCAYFALQKYSEAIASFDR 2037

Query: 475  AEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQRHFVWTSTLAEL 534
            A  +D N   +  ++GQ     GQYEEA+   D+ I L+P   +A    HFV  + LA L
Sbjct: 2038 ALALDANHIGALVKKGQSRANLGQYEEAVTLFDRVITLDPENVIA----HFVMGTALARL 2093

Query: 535  MAFSD 539
              + D
Sbjct: 2094 ARYED 2098



 Score = 65.5 bits (158), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 79/365 (21%), Positives = 131/365 (35%), Gaps = 76/365 (20%)

Query: 160 LDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQRHFVVHKMI 219
           LD+A ++ P     YY RG+     G+Y EA+ + D+ +A  P    A   R      + 
Sbjct: 301 LDKAAELSPQTTKIYYTRGKANQRLGKYREAVADFDRALAAEPENADALYSRGVSCIHL- 359

Query: 220 VPGDRERVEQSLKEFRNFVDTHSNVVEACTLFAQVLVDQEDFDGAEEYFNRSIRVDPENA 279
                 R ++SL                 ++F ++L  Q D  GA  YF           
Sbjct: 360 -----SRYDESL-----------------SVFDRILASQGDHAGAS-YFRG--------- 387

Query: 280 SLYVHRAMLMLQARGNVDEAIKLIEKAISIDKSCMFAYETLGTIEVQRGRLEEAVKCFNK 339
                   ++L   G  DEAI   E  ++ID  C  A   +G      GR  +AV  +++
Sbjct: 388 --------VVLSRLGRQDEAISAFEHTLAIDPGCASAAYQIGLASASLGRYSDAVAAYDR 439

Query: 340 ALPLARDEAELSHIYSLRDAAIAQMKVCERYNIKKKVSPRSQNITKNEKLAIKQLRENND 399
           AL                                 K+ P   +   ++  A+ +L  + D
Sbjct: 440 AL---------------------------------KIRPDYPDAVYHKGFALAKLGNSED 466

Query: 400 IIIRPADKGGKTVVMDKADYTQKMTSILNSNDYEIIPGDPTKTIEESEKYGNLENESGQK 459
            ++   D+       +   Y QK   ++ +   E       K+I        +  + G  
Sbjct: 467 ALLE-FDRALTENPGNAPAYHQKGQLLVRTGRLEEALEALNKSIALKPDNAQVYYDKGSA 525

Query: 460 H-AASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHV 518
              A  F  A    D+A  + PN  ++YY +G  +   G  +EAL   D  IA++P   +
Sbjct: 526 LLKAERFGPALEAFDQAIGIYPNYVNAYYNKGIAFSRTGMRKEALEAFDHAIAIDPTHTL 585

Query: 519 ARAQR 523
           A   R
Sbjct: 586 ALYHR 590



 Score = 65.1 bits (157), Expect = 9e-08,   Method: Compositional matrix adjust.
 Identities = 83/378 (21%), Positives = 152/378 (40%), Gaps = 54/378 (14%)

Query: 153  FTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQRH 212
            + +A    D A   DP  A  Y+Q+G+      +++EA+   +KT+AL P +  AR ++ 
Sbjct: 1280 YQEALDAFDRALVYDPENALVYFQKGRALDGLNRFQEAVAAFEKTLALKPRYSEARMRKG 1339

Query: 213  FVVHKMIVPGDRERVEQSLKEFRNFVDTHSNVVEACTLFAQVLVDQEDFDGAEEYFNRSI 272
              ++ +       R   ++++F   +  + +   A     + L D   +  A + ++R++
Sbjct: 1340 ISLYNL------GRYADAIRDFDRTIAENPHNFHAWYQKGRALFDSGSYTEAIDAYDRAL 1393

Query: 273  RVDPENASLYVHRAMLMLQARGNVDEAIKLIEKAISIDKSCMFAYETLGTIEVQRGRLEE 332
             V+      + H+  L L   G  +EA+   ++A+  +    +A    G   ++  R  E
Sbjct: 1394 EVESSYPEAHYHKG-LALYELGRYEEALLSYDQALESNPHLDYALFHRGAALMKLERYRE 1452

Query: 333  AVKCFNKALPLARDEAELSHIYSLRDAAIAQMKVCERYNIKKKVSPRSQNITKNEKLAIK 392
            AV+ F+ AL L    A   H+                    K VS  +Q + ++   A  
Sbjct: 1453 AVQAFDAALLLLPKYAPAHHL--------------------KGVSLAAQGLYQDSIYAYD 1492

Query: 393  QLRENNDIIIRPADKGGKTVVMDKADYTQKMTSILNSNDYEIIPGDPTKTIE------ES 446
            +  E         D G     ++KA       S+ N    E       K IE      E+
Sbjct: 1493 RALE--------CDPGSGESALNKA------MSLHNLGQDEDALAAAVKAIEIQPDFAEA 1538

Query: 447  EKY-GNLENESGQKHAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRN 505
             +Y G + +  G+      + ++   LD A   DP  A   YQ+G+ +   GQYE A+  
Sbjct: 1539 WRYRGLILSNLGR------YQESVEALDHALAGDPKNARVNYQKGRAFDGLGQYENAISA 1592

Query: 506  LDKTIALNPNFHVARAQR 523
             D  +   P+   AR  +
Sbjct: 1593 YDAALQAQPDCIPARMHK 1610



 Score = 65.1 bits (157), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 82/361 (22%), Positives = 150/361 (41%), Gaps = 24/361 (6%)

Query: 160 LDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQRHFVVHKMI 219
            D A  + P +  ++Y +G      G+YE+AL + D  +AL+P+        +   +K  
Sbjct: 29  FDRALTLFPKLPKAHYFKGIALYDLGRYEDALDSYDHALALDPS------DINSWYNKAA 82

Query: 220 VPGDRERVEQSLKEFRNFVDTHSNVVEACTLFAQVLVDQEDFDGAEEYFNRSIRVDPENA 279
                 R +++L      +    +  EA  L    L +   F  A   ++ ++ +DP  A
Sbjct: 83  TLAQIGRNKEALDACDRLIALRFDNAEAWILKGISLYELGRFRDAISAYDHALAIDPTYA 142

Query: 280 SLYVHRAMLMLQARGNVDEAIKLIEKAISIDKSCMFAYETLGTIEVQRGRLEEAVKCFNK 339
            +Y ++  + L   G  DEAI    KA+ I      AY  +G    + GR +EA+  F K
Sbjct: 143 KVYYNKG-IALADLGRHDEAIAAYGKAVGIVPEYAKAYYNMGISLYEIGRYDEALGAFEK 201

Query: 340 ALPLARDEAELSHIYSLRDAAIAQM----KVCERYNIKKKVSPRSQNITKNEKLAIKQLR 395
           A  L   +     ++  R   +A+     +  E   +     P   +I   + +++ +LR
Sbjct: 202 AHDLDPSD---PWVWYYRAFILAKQERYAQAAEAAGVFLSFEPEHADIWVIQGISLYRLR 258

Query: 396 ENNDIIIRPADKGGKTVVMDKAD---YTQKMTSILNSNDYEIIPGDPTKTIEESEKYGNL 452
             ++     AD   + +  D      +  K  S+ +   YE       K  E S +   +
Sbjct: 259 RLDE----AADAFDRAIEQDPLAPDAWLYKGFSLFDMERYEDATYALDKAAELSPQTTKI 314

Query: 453 ENESGQKHA-ASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCL-FGQYEEALRNLDKTI 510
               G+ +     + +A AD D A   +P  AD+ Y RG + C+   +Y+E+L   D+ +
Sbjct: 315 YYTRGKANQRLGKYREAVADFDRALAAEPENADALYSRG-VSCIHLSRYDESLSVFDRIL 373

Query: 511 A 511
           A
Sbjct: 374 A 374



 Score = 64.7 bits (156), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 87/400 (21%), Positives = 160/400 (40%), Gaps = 78/400 (19%)

Query: 153  FTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQRH 212
            +++A A  D A  +D N   +  ++GQ     GQYEEA+   D+ I L+P   +A    H
Sbjct: 2028 YSEAIASFDRALALDANHIGALVKKGQSRANLGQYEEAVTLFDRVITLDPENVIA----H 2083

Query: 213  FVVHKMIV------------------PGDRERV----EQSLKEFRNFVDTHSNVVEA--- 247
            FV+   +                    G+  R+      SL     F ++  +  +A   
Sbjct: 2084 FVMGTALARLARYEDAVVALDRALEYDGNNARIYACKGYSLYRLGRFKESAESFAKAQKR 2143

Query: 248  -------CTLFAQVLVDQEDFDGAEEYFNRSIRVDPENASLYVHRAM----LMLQARGNV 296
                        + L+    ++     F++ + ++P++A  + ++ +    L L      
Sbjct: 2144 EPKDPFSLRFRGKSLLHNGKWEEGIAIFDKLLGIEPKSADAWYYKGIAYSHLSLH----- 2198

Query: 297  DEAIKLIEKAISIDKSCMFAYETLGTIEVQRGRLEEAVKCFNKALPLARDEAELSHIYSL 356
            DEA +  E+A++ID  C  A+   G +  +R R EE++  F +A  LA    +    Y+ 
Sbjct: 2199 DEAQESFEQALTIDGECATAWYQKGLVLFERERFEESLPAFERAAELAPSVQD----YAF 2254

Query: 357  RDAAIAQMKVCERYNIKKKVSPRSQNITKNEKLAIKQLRENNDIIIRPADKGGKTVVMDK 416
            R+A    + + ERY   + +S   + +T   + A+ Q                   + + 
Sbjct: 2255 RNALC--LFMLERY--PEAISAFDRALTLGPETAVIQYYRGR-------------ALAEM 2297

Query: 417  ADYTQKMTSILNSNDYEIIPGDPTKTIEESEKYGNLENESGQKHAASDFTKAFADLDEAE 476
             DY   + ++  +     I  DP  +     K   L        A  D   A A  D+A 
Sbjct: 2298 RDYGVALDALNRA-----IGLDPENSFTWLAKGSVL-------LAQKDGAAAVAAFDQAL 2345

Query: 477  KVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNF 516
             +DP  AD+ + +G+ + L G  EEA+   D  ++L   +
Sbjct: 2346 VLDPKAADAAFFKGEAFSLLGNDEEAIHAYDLALSLESAY 2385



 Score = 63.9 bits (154), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 97/470 (20%), Positives = 182/470 (38%), Gaps = 73/470 (15%)

Query: 104  RATVYIFTSQSTKAIEDLTQLVEDTSVDPKIKVNAHIKRAVVHLHAASDFTKAFADLDEA 163
            +    + T +  +AI  L + +ED   D +      +      L A   F +A    +  
Sbjct: 692  KGIALVTTGKFEEAIAALNRALEDAPRDERAWYYKGMS-----LAALQRFEEAVRSFERV 746

Query: 164  EKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQRHFVVHKMIVPGD 223
             +++   + +++Q+G      G+  EA+ + D+ + ++P+  V       +  K I    
Sbjct: 747  LEINRRCSPAFFQKGNALAHLGKQLEAIISYDQALEIDPDNPVT------LYQKGIALAQ 800

Query: 224  RERVEQSLKEFRNFVDTHSNVVEACTLFAQVLVDQEDFDGAEEYFNRSIRVDPENASLYV 283
            RER + ++K F   +       +A          ++ FD A   F RS+ +DP+N  L  
Sbjct: 801  RERYDDAIKTFERLLTLEPENAQALYYLGIAYAGRQRFDEAIVAFERSLEIDPKN-PLAH 859

Query: 284  HRAMLMLQARGNVDEAIKLIEKAISIDKSCMFAYETLGTIEVQRGRLEEAVKCFNKALPL 343
            H   + L      D+A++   +A+ +D S    Y   G   +Q  + EEA+   N A+  
Sbjct: 860  HYMGVSLVECDRYDDALRSFSEALLLDASNASTYYYQGIAFLQSHQYEEAIAALNTAI-- 917

Query: 344  ARDEAELSHIYSLRDAAIAQM----KVCERYNIKKKVSPRSQN--ITKNEKLAIKQ---- 393
             R +  LS  ++    ++A++    +     N     +P      + + E L + Q    
Sbjct: 918  -RMDTSLSDAFTYLGISLARLGRHDEAVAALNRSLAANPSQMEALVCRGESLMVLQRYAD 976

Query: 394  --------LRENNDIIIRPADKGGKT-VVMDKADYTQKMTSILNSNDYEIIPGDPTKTIE 444
                    L  N ++I     KG     ++ K D     T +L     EI PG+     +
Sbjct: 977  AVETFDRILSLNPNVISAWMQKGAALERLVKKQDALAVYTRVL-----EINPGNA----D 1027

Query: 445  ESEKYGNLENESGQ-KHAASDFTKAFADLDEA---------------------------- 475
               + G L  + G+   A + F+KA  D++                              
Sbjct: 1028 AWARKGVLLQDLGRTAEAVTAFSKAL-DINAGIGGIWMHKGDALSTLGKTSEAAEAYAEA 1086

Query: 476  EKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQRHF 525
             K+DP+  + + + G+     G+Y++A+   D  IALN    VA   + F
Sbjct: 1087 LKLDPDQEEGWIKGGRALFDLGRYQDAIDAFDNAIALNQRSTVAFLYKGF 1136



 Score = 63.2 bits (152), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 78/368 (21%), Positives = 156/368 (42%), Gaps = 16/368 (4%)

Query: 153  FTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQRH 212
            + +  A  D+   ++P  AD++Y +G  Y     ++EA  + ++ + ++     A  Q+ 
Sbjct: 2164 WEEGIAIFDKLLGIEPKSADAWYYKGIAYSHLSLHDEAQESFEQALTIDGECATAWYQKG 2223

Query: 213  FVVHKMIVPGDRERVEQSLKEFRNFVDTHSNVVEACTLFAQVLVDQEDFDGAEEYFNRSI 272
             V+       +RER E+SL  F    +   +V +     A  L   E +  A   F+R++
Sbjct: 2224 LVLF------ERERFEESLPAFERAAELAPSVQDYAFRNALCLFMLERYPEAISAFDRAL 2277

Query: 273  RVDPENASLYVHRAMLMLQARGNVDEAIKLIEKAISIDKSCMFAYETLGTIEVQRGRLEE 332
             + PE A +  +R   + + R +   A+  + +AI +D    F +   G++ + +     
Sbjct: 2278 TLGPETAVIQYYRGRALAEMR-DYGVALDALNRAIGLDPENSFTWLAKGSVLLAQKDGAA 2336

Query: 333  AVKCFNKAL---PLARDEAEL-SHIYSLRDAAIAQMKVCERYNIKKKVSPRSQNITKNEK 388
            AV  F++AL   P A D A      +SL        +    Y++   +       +  + 
Sbjct: 2337 AVAAFDQALVLDPKAADAAFFKGEAFSLLGN---DEEAIHAYDLALSLESAYPEGSFKKG 2393

Query: 389  LAIKQLRENNDIIIRPADKGGKTVVMDKADYTQKMTSILNSNDYEIIPGDPTKTIEESEK 448
            LA+ +L+  N  I    D   + V      +  K  ++      E      T  +E    
Sbjct: 2394 LALLRLKNYNGAI-EAFDAAIQFVPGHAQAHYHKGLALFALGKNEKAIRSFTHALEHDPS 2452

Query: 449  YGNLENESGQKHAA-SDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLD 507
              +    +G  +AA S ++ A +  D+  +  P  A++ +Q+G++    G+ +EAL  L+
Sbjct: 2453 LSDALFHTGLAYAALSRYSPALSAFDKLLESGPQNAEALFQKGRMLAKLGRPDEALAVLE 2512

Query: 508  KTIALNPN 515
             ++ L  N
Sbjct: 2513 TSLGLENN 2520



 Score = 62.8 bits (151), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 84/388 (21%), Positives = 160/388 (41%), Gaps = 63/388 (16%)

Query: 142  RAVVHLHAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALN 201
            RA++HL    +   A A +++   + P  AD++Y +G+ +    Q ++A+   ++ +A+N
Sbjct: 3652 RALIHLERTGE---ALAAIEKVLTIQPESADAFYYKGRAHLNRRQDDDAIDAFNRALAIN 3708

Query: 202  PNFHVARAQRHFVVHKMIVPGDRERVEQSLKEFRNFVDTHSNVVEACTLFAQVLVDQEDF 261
              F    A+ H+  +K      + + E+++  F   +   S+  EA     + L   E  
Sbjct: 3709 RQF----AEAHY--YKGTALARKGQYEEAVAAFDAALRIKSDYPEAFYEKGRALFHLERS 3762

Query: 262  DGAEEYFNRSIRVDPENASLYVH--RAMLMLQARGNVDEAIKLIEKAISIDKSCMFAYET 319
              A   +++++  +P  A       R  + LQ   N D AI+  ++A+ ++ SC  A+  
Sbjct: 3763 KEALAAYDQALSANPGYAEAIFQKGRTYITLQ---NPDGAIRSFDRALEVNPSCFQAHYW 3819

Query: 320  LGTIEVQRGRLEEAVKCFNKALPLARDEAELSHIYSLRDAAIAQMKVCERYNIKKKVSPR 379
                    G  + A+  +++A+ +  D  EL      RD  +A                 
Sbjct: 3820 KARTLYDEGSYDAAITEYDRAIAIKPDRPEL-----YRDRGLAYA--------------- 3859

Query: 380  SQNITKNEKLAIKQLRENNDIIIRPADKGGKTVVMDKADYTQKMTSILNSNDY------- 432
                      AI Q RE     I+  DK  +        ++ K +S+     Y       
Sbjct: 3860 ----------AIDQYRE----AIKSYDKALELDTHGADAFSHKGSSLAELGMYRDALEAF 3905

Query: 433  -EIIPGDPTKTIEESEKYGNLENESGQKHAASDFTKAFADLDEAEKVDPNVADSYYQRGQ 491
             + I  DP        K GN+  + G+      FT+A A  DE  + DP  A  + +RG 
Sbjct: 3906 EKAIEKDPELATSWFGK-GNVLYDLGK------FTEACAAYDEGLRRDPENAVGWTRRGM 3958

Query: 492  IYCLFGQYEEALRNLDKTIALNPNFHVA 519
                   ++ A+ + D+ +A++P+F +A
Sbjct: 3959 SLAGLNDHKAAIESYDRALAIDPSFSIA 3986



 Score = 59.7 bits (143), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 78/386 (20%), Positives = 148/386 (38%), Gaps = 36/386 (9%)

Query: 145 VHLHAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNF 204
           + L+    F  A +  D A  +DP  A  YY +G      G+++EA+    K + + P +
Sbjct: 116 ISLYELGRFRDAISAYDHALAIDPTYAKVYYNKGIALADLGRHDEAIAAYGKAVGIVPEY 175

Query: 205 HVARAQRHFVVHKMIVPGDRERVEQSLKEFRNFVDTHSNVVEACTLFAQVLVDQEDFDGA 264
             A       ++++       R +++L  F    D   +        A +L  QE +  A
Sbjct: 176 AKAYYNMGISLYEI------GRYDEALGAFEKAHDLDPSDPWVWYYRAFILAKQERYAQA 229

Query: 265 EEYFNRSIRVDPENASLYVHRAMLMLQARGNVDEAIKLIEKAISIDKSCMFAYETLGTIE 324
            E     +  +PE+A ++V + + + + R  +DEA    ++AI  D     A+   G   
Sbjct: 230 AEAAGVFLSFEPEHADIWVIQGISLYRLR-RLDEAADAFDRAIEQDPLAPDAWLYKGFSL 288

Query: 325 VQRGRLEEAVKCFNKALPLARDEAELSHIYSLRDAAIAQM----KVCERYNIKKKVSPRS 380
               R E+A    +KA  L+    + + IY  R  A  ++    +    ++      P +
Sbjct: 289 FDMERYEDATYALDKAAELS---PQTTKIYYTRGKANQRLGKYREAVADFDRALAAEPEN 345

Query: 381 QNITKNEKLAIKQLRENND-------IIIRPADKGG----KTVVMDKADYTQKMTSILNS 429
            +   +  ++   L   ++       I+    D  G    + VV+ +     +  S    
Sbjct: 346 ADALYSRGVSCIHLSRYDESLSVFDRILASQGDHAGASYFRGVVLSRLGRQDEAISAFE- 404

Query: 430 NDYEIIPGDPTKTIEESEKYGNLENESGQKHAASDFTKAFADLDEAEKVDPNVADSYYQR 489
           +   I PG  +   +      +L            ++ A A  D A K+ P+  D+ Y +
Sbjct: 405 HTLAIDPGCASAAYQIGLASASL----------GRYSDAVAAYDRALKIRPDYPDAVYHK 454

Query: 490 GQIYCLFGQYEEALRNLDKTIALNPN 515
           G      G  E+AL   D+ +  NP 
Sbjct: 455 GFALAKLGNSEDALLEFDRALTENPG 480



 Score = 59.3 bits (142), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 80/385 (20%), Positives = 154/385 (40%), Gaps = 38/385 (9%)

Query: 147  LHAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHV 206
            L  +  +T+A    D A +V+ +  +++Y +G      G+YEEAL + D+ +  NP+   
Sbjct: 1376 LFDSGSYTEAIDAYDRALEVESSYPEAHYHKGLALYELGRYEEALLSYDQALESNPHLDY 1435

Query: 207  ARAQRHFVVHKMIVPGDRERVEQSLKEFRNFVDTHSNVVEACTLFAQVLVDQEDFDGAEE 266
            A   R   + K+      ER  ++++ F   +        A  L    L  Q  +  +  
Sbjct: 1436 ALFHRGAALMKL------ERYREAVQAFDAALLLLPKYAPAHHLKGVSLAAQGLYQDSIY 1489

Query: 267  YFNRSIRVDPENASLYVHRAMLMLQARGNVDEAIKLIEKAISIDKSCMFAYETLGTIEVQ 326
             ++R++  DP +    +++AM  L   G  ++A+    KAI I      A+   G I   
Sbjct: 1490 AYDRALECDPGSGESALNKAM-SLHNLGQDEDALAAAVKAIEIQPDFAEAWRYRGLILSN 1548

Query: 327  RGRLEEAVKCFNKALPLARDEAELSHIYSLRDAAIAQMK-VCERYNIKKKVSPRS--QNI 383
             GR +E+V+  + AL      A +++        + Q +     Y+   +  P      +
Sbjct: 1549 LGRYQESVEALDHALAGDPKNARVNYQKGRAFDGLGQYENAISAYDAALQAQPDCIPARM 1608

Query: 384  TKNEKLA-IKQLR----ENNDIIIRPADKGGKTVVMDKADYTQKMTSILNSNDYEIIPGD 438
             K E L  I + R    E   I+    D     + M +A ++                GD
Sbjct: 1609 HKGEALLFISRFRDATKEFGKILTEHPDNAEAWIKMARARFSL---------------GD 1653

Query: 439  PTKTIEESEKYGNLENESGQ--------KHAASDFTKAFADLDEAEKVDPNVADSYYQRG 490
             T+ IE  +       +S +        ++    + +A   L  AE++D ++  + Y  G
Sbjct: 1654 YTEVIEACDHALRFNADSAEALLYRGLAQYELGRYEEAVESLARAEQIDSHLEQAVYHLG 1713

Query: 491  QIYCLFGQYEEALRNLDKTIALNPN 515
                   +Y +A+   D+ ++L P+
Sbjct: 1714 AALLKLERYGDAIPAFDRVLSLKPD 1738



 Score = 58.2 bits (139), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 91/430 (21%), Positives = 165/430 (38%), Gaps = 81/430 (18%)

Query: 141  KRAVVHLHAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIAL 200
            K+    +HA  ++  A A  D A  + P+   +Y +RG+      + +EA+ + D+ +AL
Sbjct: 3037 KKGGALMHA-GNYEGAVAAFDHAISLLPDDPGAYLERGRALAALNRNDEAVASFDQVLAL 3095

Query: 201  NPNFHVARAQRHFVVHKMIVPGDRERVEQSLKEFRNFVDTHSNVVEACTLFAQVLVDQED 260
             P   VA  +R   ++         + E +++     + +      A    A  L   E 
Sbjct: 3096 EPADPVASFERGRALYYAA------KYEHAVEALDTTLSSDPRHPGALYFRAASLAALER 3149

Query: 261  FDGAEEYFNRSIRVDPENASLYVHRAMLMLQAR--------------------------- 293
            +  A E F R +   PENA  +  +  ++ + R                           
Sbjct: 3150 YAEAAESFERLLVYTPENADAWYEQGCVLARLRHYDEAIAAFDHVLNLVPEHFDALFQKA 3209

Query: 294  ------GNVDEAIKLIEKAISIDKSCMFAYETLGTIEVQRGRLEEAVKCFNKALPLARDE 347
                  G   EA+     A+++  S    +   G    + G+ EEAVK F+ AL      
Sbjct: 3210 RALDDLGKYSEAVTSYSAALALKPSDAKTHYYRGVSLAENGQPEEAVKAFDAAL------ 3263

Query: 348  AELSHIYSLRDAAIAQMKVCERYNIKK---KVSPRSQNITKN-------EKLAIKQLREN 397
             E+  ++S  DA  A+ K      + +   K   ++  I KN       + LA+ +L  +
Sbjct: 3264 -EIDPVFS--DALFAKGKALLTLGMFREAVKTFDKTLLIEKNYAGVYFHKGLALAELGRH 3320

Query: 398  NDIIIR-----PADKGGKTVVMDKA---DYTQKMTSILNSNDYEIIPGDPTKTIEESEKY 449
            ++ I         D G       K      T K+T+ + + D+ +I  DP          
Sbjct: 3321 DEAITAFDKDIDLDAGNNDAFYHKGVSLAATGKLTNAMEAFDH-VIQADP---------- 3369

Query: 450  GNLENESGQKHAASD---FTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNL 506
            G+++    +  A  D   F  A +   +A ++ P  AD++Y  G+ Y     Y+EA+   
Sbjct: 3370 GSVQGWLHRGMALFDLGRFNDAISSYKKALEIGPTNADAWYLVGRSYYALNTYDEAIAAF 3429

Query: 507  DKTIALNPNF 516
            D+ + L   F
Sbjct: 3430 DRALDLQGEF 3439



 Score = 57.4 bits (137), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 91/461 (19%), Positives = 184/461 (39%), Gaps = 54/461 (11%)

Query: 121  LTQLVEDTSVDPKIKVNAHIKRAVVHLHAASDFTKAFADLDEAEKVDPNVADSYYQRGQI 180
            L  L     +DP+       K +V  L A  D   A A  D+A  +DP  AD+ + +G+ 
Sbjct: 2304 LDALNRAIGLDPENSFTWLAKGSV--LLAQKDGAAAVAAFDQALVLDPKAADAAFFKGEA 2361

Query: 181  YCLFGQYEEALRNLDKTIALNPNFHVARAQRHFVVHKM---------------IVPGDRE 225
            + L G  EEA+   D  ++L   +     ++   + ++                VPG  +
Sbjct: 2362 FSLLGNDEEAIHAYDLALSLESAYPEGSFKKGLALLRLKNYNGAIEAFDAAIQFVPGHAQ 2421

Query: 226  -------------RVEQSLKEFRNFVDTHSNVVEACTLFAQVLVDQEDFDGAEEYFNRSI 272
                         + E++++ F + ++   ++ +A             +  A   F++ +
Sbjct: 2422 AHYHKGLALFALGKNEKAIRSFTHALEHDPSLSDALFHTGLAYAALSRYSPALSAFDKLL 2481

Query: 273  RVDPENASLYVHRAMLMLQARGNVDEAIKLIEKAISIDKSCMFAYETLGTIEVQRGRLEE 332
               P+NA     +   ML   G  DEA+ ++E ++ ++ +    +   G++ +++ RLE+
Sbjct: 2482 ESGPQNAEALFQKGR-MLAKLGRPDEALAVLETSLGLENNIADVWLLKGSVLLEQERLED 2540

Query: 333  AVKCFNKALPLARDEAELSHIYSLRDAAIAQMKVCERYNIKKKVSPRSQNITKNEKLAIK 392
            A++ F++AL L     E +  +  +  A + +    RY   + +    + +T +   A  
Sbjct: 2541 ALEVFDRALALT---PENNAAWYRKGKAFSGL---HRY--PEAIQCFDRVVTSDTGCAQA 2592

Query: 393  QLRENNDII----IRPADKGGKTVVMDKAD----YTQKMTSILNSNDY-EIIPG-DPTKT 442
              R+ + ++    +R A +     +  K D    +  +  ++     Y E IP  D   +
Sbjct: 2593 WFRKGSALLSNGDLRAAIEALTKALELKPDNANGWYDRAVALAGLGRYEESIPSYDRALS 2652

Query: 443  IEESEKYGNLENESGQKHAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEA 502
            +         +  S       D  +A    + A  +DP  A +Y ++G       + +EA
Sbjct: 2653 LNPKYTSAYFDKGSALSRLGRD-RQAIEAFEMASAIDPEFAVAYLEKGLALARLSKNKEA 2711

Query: 503  LRNLDKTIALNPNFHVARAQRHFVWTSTLAELMAFSDEFMI 543
            +   D T+AL+P    A     F     LA L  F+D   +
Sbjct: 2712 VAAFDATLALDP----ANVPALFNKGLALANLKKFADAITV 2748



 Score = 57.0 bits (136), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 88/406 (21%), Positives = 162/406 (39%), Gaps = 48/406 (11%)

Query: 148  HAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVA 207
            +A + + +A A  D A  +    A+++Y +G+     G+Y EA+   D T+ L P    A
Sbjct: 3417 YALNTYDEAIAAFDRALDLQGEFAEAWYYKGRTLFAMGKYGEAVSAYDSTLVLRPKHDEA 3476

Query: 208  RAQRHFVVHKMIVPGDR-ERVEQSLKEFRNF-------------VDTHSNVVEACTLFAQ 253
               +   + K+   GD     +Q+L+   NF             +D H + +   T    
Sbjct: 3477 FYHKGMALLKLQRAGDAVSAFDQALRLRPNFSYIWTGKGMALAALDRHKDAISCYT--KA 3534

Query: 254  VLVDQED----------------FDGAEEYFNRSIRVDPENASLYVHRAMLMLQARGNVD 297
            + +D++D                +  A   F  ++   P  A  +  +    L       
Sbjct: 3535 IALDRKDSRAYYQAGLSYLSLGRYQDAIRNFEATLVQHPSCARAFYAKGR-ALCGVSMFH 3593

Query: 298  EAIKLIEKAISIDKSCMFAYETLGTIEVQRGRLEEAVKCFNKALPLARDEAELSHIYSLR 357
            EAI   +KA+S       A+   G  E      EEA+ C+N A  LA++E+  + + +  
Sbjct: 3594 EAITSFDKALSEQSDYPEAWLYRGIAEANLEEFEEALDCYNHA--LAQNESYATALLNKG 3651

Query: 358  DAAIAQMKVCERYNIKKKV---SPRSQNITKNEKLAIKQLRENNDIIIRPADKGGKTVVM 414
             A I   +  E     +KV    P S +    +  A    R+++D I    D   + + +
Sbjct: 3652 RALIHLERTGEALAAIEKVLTIQPESADAFYYKGRAHLNRRQDDDAI----DAFNRALAI 3707

Query: 415  DK----ADYTQKMTSILNSNDYEIIPGDPTKTIEESEKYGNLENESGQKHAASDFTK-AF 469
            ++    A Y  K T++     YE         +     Y     E G+     + +K A 
Sbjct: 3708 NRQFAEAHYY-KGTALARKGQYEEAVAAFDAALRIKSDYPEAFYEKGRALFHLERSKEAL 3766

Query: 470  ADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPN 515
            A  D+A   +P  A++ +Q+G+ Y      + A+R+ D+ + +NP+
Sbjct: 3767 AAYDQALSANPGYAEAIFQKGRTYITLQNPDGAIRSFDRALEVNPS 3812



 Score = 56.6 bits (135), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 70/287 (24%), Positives = 111/287 (38%), Gaps = 46/287 (16%)

Query: 89   ESTSSNHTKALARLLRATVYIFTSQSTKAIEDLTQLVEDTSVDPKIKVNAHIKRAVVHLH 148
            ++ S+N   A A   +   YI       AI    + +E   V+P     AH  +A   L+
Sbjct: 3771 QALSANPGYAEAIFQKGRTYITLQNPDGAIRSFDRALE---VNPSC-FQAHYWKART-LY 3825

Query: 149  AASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVAR 208
                +  A  + D A  + P+  + Y  RG  Y    QY EA+++ DK + L+   H A 
Sbjct: 3826 DEGSYDAAITEYDRAIAIKPDRPELYRDRGLAYAAIDQYREAIKSYDKALELDT--HGAD 3883

Query: 209  AQRHFVVHKMIVPGDRERVEQSLKEFRNFVDTHSNVVEACTLFAQVLVDQEDFDGAEEYF 268
            A      HK     +      +L+ F   ++    +  +      VL D   F  A   +
Sbjct: 3884 A----FSHKGSSLAELGMYRDALEAFEKAIEKDPELATSWFGKGNVLYDLGKFTEACAAY 3939

Query: 269  NRSIRVDPENASLYVHRAMLMLQARGNVDEAIKLIEKAISIDKSCMFAY-------ETLG 321
            +  +R DPENA  +  R M  L    +   AI+  ++A++ID S   AY       E LG
Sbjct: 3940 DEGLRRDPENAVGWTRRGM-SLAGLNDHKAAIESYDRALAIDPSFSIAYFTRGSAFEALG 3998

Query: 322  TIE--------------------VQRGR-------LEEAVKCFNKAL 341
              E                    + +GR        +EA+  F +AL
Sbjct: 3999 QFEEAEASFRAMISLQPDFVDAWIHQGRALQEQEKYQEALTSFKRAL 4045



 Score = 55.1 bits (131), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 56/259 (21%), Positives = 105/259 (40%), Gaps = 53/259 (20%)

Query: 128 TSVDPKIKVNAHIKRAVVH----LHAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCL 183
            + D  +K+      AV H    L    +   A  + D A   +P  A +Y+Q+GQ+   
Sbjct: 435 AAYDRALKIRPDYPDAVYHKGFALAKLGNSEDALLEFDRALTENPGNAPAYHQKGQLLVR 494

Query: 184 FGQYEEALRNLDKTIALNPNFHVARAQRHFVVHKMIVPGDR-----ERVEQSLKEFRNFV 238
            G+ EEAL  L+K+IAL P+     AQ ++     ++  +R     E  +Q++  + N+V
Sbjct: 495 TGRLEEALEALNKSIALKPD----NAQVYYDKGSALLKAERFGPALEAFDQAIGIYPNYV 550

Query: 239 DTHSNVVEACTLFAQVLVDQEDFDGAEEYFNRSIRVDPENASLYVHRAMLM--------- 289
           + + N   A   F++  + +E    A E F+ +I +DP +     HR  ++         
Sbjct: 551 NAYYNKGIA---FSRTGMRKE----ALEAFDHAIAIDPTHTLALYHRGTMLSGLGRYADA 603

Query: 290 ------------------------LQARGNVDEAIKLIEKAISIDKSCMFAYETLGTIEV 325
                                   L       +A +   +A+  D   + A+   GT   
Sbjct: 604 AAAYDAVLALSPQNTSALYEKGVALMQLSRWKDAAEAFGQAVEQDPGLIDAWLAFGTCNA 663

Query: 326 QRGRLEEAVKCFNKALPLA 344
             G+  +A+  F++ + L+
Sbjct: 664 NLGKFPDAIAAFDRVIALS 682



 Score = 54.7 bits (130), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 74/366 (20%), Positives = 138/366 (37%), Gaps = 54/366 (14%)

Query: 153  FTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQRH 212
            F +A    D+   ++ N A  Y+ +G      G+++EA+   DK I L+   + A     
Sbjct: 3286 FREAVKTFDKTLLIEKNYAGVYFHKGLALAELGRHDEAITAFDKDIDLDAGNNDA----- 3340

Query: 213  FVVHKMIVPGDRERVEQSLKEFRNFVDTHSNVVEACTLFAQVLVDQEDFDGAEEYFNRSI 272
               HK +      ++  +++ F + +      V+        L D   F+ A   + +++
Sbjct: 3341 -FYHKGVSLAATGKLTNAMEAFDHVIQADPGSVQGWLHRGMALFDLGRFNDAISSYKKAL 3399

Query: 273  RVDPENASLY--VHRAMLMLQARGNVDEAIKLIEKAISIDKSCMFAYETLGTIEVQRGRL 330
             + P NA  +  V R+   L      DEAI   ++A+ +      A+   G      G+ 
Sbjct: 3400 EIGPTNADAWYLVGRSYYALN---TYDEAIAAFDRALDLQGEFAEAWYYKGRTLFAMGKY 3456

Query: 331  EEAVKCFNKALPL--ARDEAELSHIYSLRDAAIAQMKVCERYNIKKKVSPRSQNITKNEK 388
             EAV  ++  L L    DEA      +L     A   V   ++   ++ P    I   + 
Sbjct: 3457 GEAVSAYDSTLVLRPKHDEAFYHKGMALLKLQRAGDAVSA-FDQALRLRPNFSYIWTGKG 3515

Query: 389  LAIKQLRENNDIIIRPADKGGKTVVMDKAD---YTQKMTSILNSNDYEIIPGDPTKTIEE 445
            +A+  L  + D I        K + +D+ D   Y Q   S L+   Y+    D  +  E 
Sbjct: 3516 MALAALDRHKDAI----SCYTKAIALDRKDSRAYYQAGLSYLSLGRYQ----DAIRNFEA 3567

Query: 446  SEKYGNLENESGQKHAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRN 505
            +            +H                   P+ A ++Y +G+  C    + EA+ +
Sbjct: 3568 TL----------VQH-------------------PSCARAFYAKGRALCGVSMFHEAITS 3598

Query: 506  LDKTIA 511
             DK ++
Sbjct: 3599 FDKALS 3604



 Score = 54.3 bits (129), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 75/385 (19%), Positives = 149/385 (38%), Gaps = 38/385 (9%)

Query: 165  KVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQRHFVVHKM------ 218
            K+DP+  + + + G+     G+Y++A+   D  IALN    VA   + F + K+      
Sbjct: 1088 KLDPDQEEGWIKGGRALFDLGRYQDAIDAFDNAIALNQRSTVAFLYKGFSLEKINRAGEA 1147

Query: 219  ---------IVPGDRE-------------RVEQSLKEFRNFVDTHSNVVEACTLFAQVLV 256
                     I P + E             R + +L  F + +        A     ++L+
Sbjct: 1148 LQVFEVLLEIDPHNSEAHYHMGLALAGSGRPKDALAAFESALKIRDTFAPAWYNKGKMLL 1207

Query: 257  DQEDFDGAEEYFNRSIRVDPENASLYVHRAMLMLQARGNVDEAIKLIEKAISIDKSCMFA 316
            D   +  A   F++++  +P    ++  R +  L   G   EAI+  E+ +  D S    
Sbjct: 1208 DLGKYQEALAAFDQALEREPAYTEVFYSRGV-ALSKLGRFPEAIEAFERNLEKDTSNAPG 1266

Query: 317  YETLGTIEVQRGRLEEAVKCFNKALPLARDEAELSHIYSLRDAAIAQM----KVCERYNI 372
            Y   G    + GR +EA+  F++AL     + E + +Y  +  A+  +    +    +  
Sbjct: 1267 YYFKGIALSKLGRYQEALDAFDRALVY---DPENALVYFQKGRALDGLNRFQEAVAAFEK 1323

Query: 373  KKKVSPRSQNITKNEKLAIKQLRENNDIIIRPADKGGKTVVMDKADYTQKMTSILNSNDY 432
               + PR       + +++  L    D I R  D+       +   + QK  ++ +S  Y
Sbjct: 1324 TLALKPRYSEARMRKGISLYNLGRYADAI-RDFDRTIAENPHNFHAWYQKGRALFDSGSY 1382

Query: 433  EIIPGDPTKTIEESEKYGNLENESGQK-HAASDFTKAFADLDEAEKVDPNVADSYYQRGQ 491
                    + +E    Y       G   +    + +A    D+A + +P++  + + RG 
Sbjct: 1383 TEAIDAYDRALEVESSYPEAHYHKGLALYELGRYEEALLSYDQALESNPHLDYALFHRGA 1442

Query: 492  IYCLFGQYEEALRNLDKTIALNPNF 516
                  +Y EA++  D  + L P +
Sbjct: 1443 ALMKLERYREAVQAFDAALLLLPKY 1467



 Score = 52.8 bits (125), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 80/429 (18%), Positives = 166/429 (38%), Gaps = 54/429 (12%)

Query: 128  TSVDPKIKVNAHIKRAVVH----LHAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCL 183
            T+ D  I ++A    A  H    L A    T A    D   + DP     +  RG     
Sbjct: 3325 TAFDKDIDLDAGNNDAFYHKGVSLAATGKLTNAMEAFDHVIQADPGSVQGWLHRGMALFD 3384

Query: 184  FGQYEEALRNLDKTIALNPNFHVARAQRHFVVHKMIVPGDRERVEQSLKEFRNFVDTHSN 243
             G++ +A+ +  K + + P      A   ++V +          ++++  F   +D    
Sbjct: 3385 LGRFNDAISSYKKALEIGPT----NADAWYLVGRSYYA--LNTYDEAIAAFDRALDLQGE 3438

Query: 244  VVEACTLFAQVLVDQEDFDGAEEYFNRSIRVDPENASLYVHRAMLMLQARGNVDEAIKLI 303
              EA     + L     +  A   ++ ++ + P++   + H+ M +L+ +    +A+   
Sbjct: 3439 FAEAWYYKGRTLFAMGKYGEAVSAYDSTLVLRPKHDEAFYHKGMALLKLQ-RAGDAVSAF 3497

Query: 304  EKAISIDKSCMFAYETLGTIEVQRGRLEEAVKCFNKALPLARD------EAELSHIYSLR 357
            ++A+ +  +  + +   G       R ++A+ C+ KA+ L R       +A LS++   R
Sbjct: 3498 DQALRLRPNFSYIWTGKGMALAALDRHKDAISCYTKAIALDRKDSRAYYQAGLSYLSLGR 3557

Query: 358  --------DAAIAQMKVCERYNIKK-----KVSPRSQNITKNEKLAIKQLRENNDIIIRP 404
                    +A + Q   C R    K      VS   + IT  +    K L E +D     
Sbjct: 3558 YQDAIRNFEATLVQHPSCARAFYAKGRALCGVSMFHEAITSFD----KALSEQSDY---- 3609

Query: 405  ADKGGKTVVMDKADYTQKMTSILNSNDYEIIPGDPTKTIEESEKYGNLENESGQKHAASD 464
                          +  +  +  N  ++E         + ++E Y       G+     +
Sbjct: 3610 -----------PEAWLYRGIAEANLEEFEEALDCYNHALAQNESYATALLNKGRALIHLE 3658

Query: 465  FT-KAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQR 523
             T +A A +++   + P  AD++Y +G+ +    Q ++A+   ++ +A+N  F    A+ 
Sbjct: 3659 RTGEALAAIEKVLTIQPESADAFYYKGRAHLNRRQDDDAIDAFNRALAINRQF----AEA 3714

Query: 524  HFVWTSTLA 532
            H+   + LA
Sbjct: 3715 HYYKGTALA 3723



 Score = 51.6 bits (122), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 52/265 (19%), Positives = 114/265 (43%), Gaps = 16/265 (6%)

Query: 83   HCTEEIESTSSNHTKALARLLRATVYIFTSQSTKAIEDLTQLVEDTSVDPKIKVNAHIKR 142
             C + + ++ +   +A  R  + +  +       AIE LT+ +E   + P    N    R
Sbjct: 2577 QCFDRVVTSDTGCAQAWFR--KGSALLSNGDLRAAIEALTKALE---LKPD-NANGWYDR 2630

Query: 143  AVVHLHAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNP 202
            AV  L     + ++    D A  ++P    +Y+ +G      G+  +A+   +   A++P
Sbjct: 2631 AVA-LAGLGRYEESIPSYDRALSLNPKYTSAYFDKGSALSRLGRDRQAIEAFEMASAIDP 2689

Query: 203  NFHVARAQRHFVVHKMIVPGDRERVEQSLKEFRNFVDTHSNVVEACTLFAQVLVDQEDFD 262
             F VA  ++   + ++       + ++++  F   +      V A       L + + F 
Sbjct: 2690 EFAVAYLEKGLALARL------SKNKEAVAAFDATLALDPANVPALFNKGLALANLKKFA 2743

Query: 263  GAEEYFNRSIRVDPENASLYVHRAMLMLQARGNVDEAIKLIEKAISIDKSCMFAYETLGT 322
             A   F+ ++R+D ++   +  +     + R + D+A+   + A++ID      +   G 
Sbjct: 2744 DAITVFDAALRIDAKHYEAWFAKGYAQSRLR-HYDDAVGAFDHALAIDPGRYAVWYEKGV 2802

Query: 323  IEVQRGRLEEAVKCFNKALPLARDE 347
               + G+ +EAV  F++A  +ARD+
Sbjct: 2803 ALARAGKNDEAVAAFSEA--IARDD 2825



 Score = 51.2 bits (121), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 71/352 (20%), Positives = 136/352 (38%), Gaps = 50/352 (14%)

Query: 168  PNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQRHF--VVHKMIVPGDRE 225
            P  AD++Y++G +      Y+EA+   D  + L P         HF  +  K     D  
Sbjct: 3165 PENADAWYEQGCVLARLRHYDEAIAAFDHVLNLVPE--------HFDALFQKARALDDLG 3216

Query: 226  RVEQSLKEFRNFVDTHSNVVEACTLFAQVLVDQEDFDGAEEYFNRSIRVDP--ENASLYV 283
            +  +++  +   +    +  +        L +    + A + F+ ++ +DP   +A    
Sbjct: 3217 KYSEAVTSYSAALALKPSDAKTHYYRGVSLAENGQPEEAVKAFDAALEIDPVFSDALFAK 3276

Query: 284  HRAMLMLQARGNVDEAIKLIEKAISIDKSCMFAYETLGTIEVQRGRLEEAVKCFNKALPL 343
             +A+L L   G   EA+K  +K + I+K+    Y   G    + GR +EA+  F+K + L
Sbjct: 3277 GKALLTL---GMFREAVKTFDKTLLIEKNYAGVYFHKGLALAELGRHDEAITAFDKDIDL 3333

Query: 344  ARDEAELSHIYSLRDAAIAQM-KVCERYNIKKKVSPRSQNITKNEKLAIKQLRENNDIII 402
                 +  +   +  AA  ++    E ++   +  P S     +  +A+  L   ND I 
Sbjct: 3334 DAGNNDAFYHKGVSLAATGKLTNAMEAFDHVIQADPGSVQGWLHRGMALFDLGRFNDAI- 3392

Query: 403  RPADKGGKTVVMDKADYTQKMTSILNSNDYEIIPGDPTKTIEESEKYGNLENESGQKHAA 462
                          + Y + +         EI P +          Y          +A 
Sbjct: 3393 --------------SSYKKAL---------EIGPTNADAWYLVGRSY----------YAL 3419

Query: 463  SDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNP 514
            + + +A A  D A  +    A+++Y +G+     G+Y EA+   D T+ L P
Sbjct: 3420 NTYDEAIAAFDRALDLQGEFAEAWYYKGRTLFAMGKYGEAVSAYDSTLVLRP 3471



 Score = 51.2 bits (121), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 53/225 (23%), Positives = 93/225 (41%), Gaps = 46/225 (20%)

Query: 117  AIEDLTQLVEDTSVDPKIKVNAHIKRAVVHLHAASDFTKAFADLDEAEKVDPNVADSYYQ 176
            A+E   + +E    DP++  +   K  V  L+    FT+A A  DE  + DP  A  + +
Sbjct: 3901 ALEAFEKAIEK---DPELATSWFGKGNV--LYDLGKFTEACAAYDEGLRRDPENAVGWTR 3955

Query: 177  RGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQRHFVVHKMIVPGDRERVEQSLKEFRN 236
            RG        ++ A+ + D+ +A++P+F +A    +F                       
Sbjct: 3956 RGMSLAGLNDHKAAIESYDRALAIDPSFSIA----YF----------------------- 3988

Query: 237  FVDTHSNVVEACTLFAQVLVDQEDFDGAEEYFNRSIRVDPENASLYVHRAMLMLQARGNV 296
               T  +  EA             F+ AE  F   I + P+    ++H+    LQ +   
Sbjct: 3989 ---TRGSAFEALG----------QFEEAEASFRAMISLQPDFVDAWIHQGR-ALQEQEKY 4034

Query: 297  DEAIKLIEKAISIDKSCMFAYETLGTIEVQRGRLEEAVKCFNKAL 341
             EA+   ++A+ ID S    +  +G+   + G+ EEA  C+ KAL
Sbjct: 4035 QEALTSFKRALEIDPSRKEIWNDVGSTLDKLGKHEEAQICYEKAL 4079



 Score = 50.8 bits (120), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 75/401 (18%), Positives = 155/401 (38%), Gaps = 76/401 (18%)

Query: 150 ASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARA 209
           A  F  A    D+A  + PN  ++YY +G  +   G  +EAL   D  IA++P   +A  
Sbjct: 529 AERFGPALEAFDQAIGIYPNYVNAYYNKGIAFSRTGMRKEALEAFDHAIAIDPTHTLALY 588

Query: 210 QRHFVV----------------------------HKMIVPGDRERVEQSLKEFRNFVDTH 241
            R  ++                             K +      R + + + F   V+  
Sbjct: 589 HRGTMLSGLGRYADAAAAYDAVLALSPQNTSALYEKGVALMQLSRWKDAAEAFGQAVEQD 648

Query: 242 SNVVEACTLFAQVLVDQEDFDGAEEYFNRSIRVDPENASLYVHRAMLMLQARGNVDEAIK 301
             +++A   F     +   F  A   F+R I + P+N   ++H+ + ++   G  +EAI 
Sbjct: 649 PGLIDAWLAFGTCNANLGKFPDAIAAFDRVIALSPKNTQAFIHKGIALVTT-GKFEEAIA 707

Query: 302 LIEKAIS---IDKSCMFAYETLGTIEVQRGRLEEAVKCFNKALPLARDEAELSHIYSLRD 358
            + +A+     D+   + Y+ +    +QR   EEAV+ F + L + R     S  +  + 
Sbjct: 708 ALNRALEDAPRDERAWY-YKGMSLAALQR--FEEAVRSFERVLEINR---RCSPAFFQKG 761

Query: 359 AAIA----QMKVCERYNIKKKVSPRSQNITKNEKLAIKQLRENNDIIIRPADKGGKTVVM 414
            A+A    Q++    Y+   ++ P +      + +A+ Q    +D I        KT   
Sbjct: 762 NALAHLGKQLEAIISYDQALEIDPDNPVTLYQKGIALAQRERYDDAI--------KTF-- 811

Query: 415 DKADYTQKMTSILNSNDYEIIPGDPTKTIEESEKYGNLENESGQKHAASDFTKAFADLDE 474
                 +++ ++   N              ++  Y  +     Q+     F +A    + 
Sbjct: 812 ------ERLLTLEPEN-------------AQALYYLGIAYAGRQR-----FDEAIVAFER 847

Query: 475 AEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPN 515
           + ++DP    +++  G       +Y++ALR+  + + L+ +
Sbjct: 848 SLEIDPKNPLAHHYMGVSLVECDRYDDALRSFSEALLLDAS 888



 Score = 50.8 bits (120), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 54/231 (23%), Positives = 95/231 (41%), Gaps = 12/231 (5%)

Query: 111  TSQSTKAIEDLTQLVEDTSVDPKIKVNAHIKRAVVHLHAASDFTKAFADLDEAEKVDPNV 170
            T + T A+E    +++    DP   V   + R +  L     F  A +   +A ++ P  
Sbjct: 3351 TGKLTNAMEAFDHVIQ---ADPG-SVQGWLHRGMA-LFDLGRFNDAISSYKKALEIGPTN 3405

Query: 171  ADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQRHFVVHKMIVPGDRERVEQS 230
            AD++Y  G+ Y     Y+EA+   D+ + L   F  A   +   +  M   G+      S
Sbjct: 3406 ADAWYLVGRSYYALNTYDEAIAAFDRALDLQGEFAEAWYYKGRTLFAMGKYGEAVSAYDS 3465

Query: 231  LKEFRNFVDTHSNVVEACTLFAQVLVDQEDFDGAEEYFNRSIRVDPENASLYVHRAMLML 290
                R   D      EA       L+  +    A   F++++R+ P  + ++  + M  L
Sbjct: 3466 TLVLRPKHD------EAFYHKGMALLKLQRAGDAVSAFDQALRLRPNFSYIWTGKGM-AL 3518

Query: 291  QARGNVDEAIKLIEKAISIDKSCMFAYETLGTIEVQRGRLEEAVKCFNKAL 341
             A     +AI    KAI++D+    AY   G   +  GR ++A++ F   L
Sbjct: 3519 AALDRHKDAISCYTKAIALDRKDSRAYYQAGLSYLSLGRYQDAIRNFEATL 3569



 Score = 49.3 bits (116), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 43/184 (23%), Positives = 88/184 (47%), Gaps = 23/184 (12%)

Query: 166  VDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQRHFVVHKMIVPGDRE 225
            V+P  AD YY  G  Y    + E+A+    KT+ ++P    A  Q   V+ ++      E
Sbjct: 1939 VNPAAADDYYHLGLAYIEQHRDEKAIAAFAKTLRIDPENPDALFQAGIVLARL------E 1992

Query: 226  RVEQSLKEFRNFVDT---HSNVV--EACTLFAQVLVDQEDFDGAEEYFNRSIRVDPENAS 280
            + ++++  F  +++    ++ ++    C  FA      + +  A   F+R++ +D  +  
Sbjct: 1993 KYDEAIGLFDRYLELGKENAGILYERGCAYFA-----LQKYSEAIASFDRALALDANHIG 2047

Query: 281  LYVHRAMLMLQARGNV---DEAIKLIEKAISIDKSCMFAYETLGTIEVQRGRLEEAVKCF 337
              V +     Q+R N+   +EA+ L ++ I++D   + A+  +GT   +  R E+AV   
Sbjct: 2048 ALVKKG----QSRANLGQYEEAVTLFDRVITLDPENVIAHFVMGTALARLARYEDAVVAL 2103

Query: 338  NKAL 341
            ++AL
Sbjct: 2104 DRAL 2107



 Score = 48.1 bits (113), Expect = 0.012,   Method: Compositional matrix adjust.
 Identities = 76/389 (19%), Positives = 155/389 (39%), Gaps = 25/389 (6%)

Query: 143 AVVHLHAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNP 202
           A++ L    D  +AF    +A + DP + D++   G      G++ +A+   D+ IAL+P
Sbjct: 627 ALMQLSRWKDAAEAFG---QAVEQDPGLIDAWLAFGTCNANLGKFPDAIAAFDRVIALSP 683

Query: 203 NFHVARAQRHFVVHKMIVPGDRERVEQSLKEFRNFVDTHSNVVEACTLFAQVLVDQEDFD 262
                       +HK I      + E+++      ++       A       L   + F+
Sbjct: 684 K------NTQAFIHKGIALVTTGKFEEAIAALNRALEDAPRDERAWYYKGMSLAALQRFE 737

Query: 263 GAEEYFNRSIRVDPENASLYVHRAMLMLQARGNVDEAIKLIEKAISIDKSCMFAYETLGT 322
            A   F R + ++   +  +  +    L   G   EAI   ++A+ ID          G 
Sbjct: 738 EAVRSFERVLEINRRCSPAFFQKGN-ALAHLGKQLEAIISYDQALEIDPDNPVTLYQKGI 796

Query: 323 IEVQRGRLEEAVKCFNKALPLARDEAELSHIYSLRDAAIAQMKVCER-YNIKKKVSPRSQ 381
              QR R ++A+K F + L L  + A+   +Y L  A   + +  E     ++ +    +
Sbjct: 797 ALAQRERYDDAIKTFERLLTLEPENAQA--LYYLGIAYAGRQRFDEAIVAFERSLEIDPK 854

Query: 382 NITKNEKLAIKQLR-ENNDIIIRPADKGGKTVVMDKADYTQKMTSILNSNDY-EIIPGDP 439
           N   +  + +  +  +  D  +R   +       + + Y  +  + L S+ Y E I    
Sbjct: 855 NPLAHHYMGVSLVECDRYDDALRSFSEALLLDASNASTYYYQGIAFLQSHQYEEAIAALN 914

Query: 440 TK-----TIEESEKYGNLENESGQKHAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYC 494
           T      ++ ++  Y  +      +H      +A A L+ +   +P+  ++   RG+   
Sbjct: 915 TAIRMDTSLSDAFTYLGISLARLGRH-----DEAVAALNRSLAANPSQMEALVCRGESLM 969

Query: 495 LFGQYEEALRNLDKTIALNPNFHVARAQR 523
           +  +Y +A+   D+ ++LNPN   A  Q+
Sbjct: 970 VLQRYADAVETFDRILSLNPNVISAWMQK 998



 Score = 40.4 bits (93), Expect = 2.4,   Method: Compositional matrix adjust.
 Identities = 37/169 (21%), Positives = 71/169 (42%), Gaps = 7/169 (4%)

Query: 175  YQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQRHFVVHKMIVPGDRERVEQSLKEF 234
            Y+RG  Y    +Y EA+ + D+ +AL+ N H+       +V K     +  + E+++  F
Sbjct: 2016 YERGCAYFALQKYSEAIASFDRALALDAN-HIGA-----LVKKGQSRANLGQYEEAVTLF 2069

Query: 235  RNFVDTHSNVVEACTLFAQVLVDQEDFDGAEEYFNRSIRVDPENASLYVHRAMLMLQARG 294
               +      V A  +    L     ++ A    +R++  D  NA +Y  +   + +  G
Sbjct: 2070 DRVITLDPENVIAHFVMGTALARLARYEDAVVALDRALEYDGNNARIYACKGYSLYRL-G 2128

Query: 295  NVDEAIKLIEKAISIDKSCMFAYETLGTIEVQRGRLEEAVKCFNKALPL 343
               E+ +   KA   +    F+    G   +  G+ EE +  F+K L +
Sbjct: 2129 RFKESAESFAKAQKREPKDPFSLRFRGKSLLHNGKWEEGIAIFDKLLGI 2177



 Score = 40.0 bits (92), Expect = 3.5,   Method: Compositional matrix adjust.
 Identities = 37/183 (20%), Positives = 78/183 (42%), Gaps = 7/183 (3%)

Query: 161  DEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQRHFVVHKMIV 220
            ++A +++P+     +  G+ +   GQ+E+A+   D  +   P           +  K   
Sbjct: 2920 EKARQIEPHNLPLLFADGRAWARLGQFEDAIHLFDIALGKEPG------NGEILFEKAKA 2973

Query: 221  PGDRERVEQSLKEFRNFVDTHSNVVEACTLFAQVLVDQEDFDGAEEYFNRSIRVDPENAS 280
                 R +++ + FR      ++  E   L    L+  E ++ A+  F+ ++ + P+   
Sbjct: 2974 LAALGRHDEAQEIFRLAFTQLTDNYEPAYLRGLSLLALERYEDADMAFDAALSLSPDLPE 3033

Query: 281  LYVHRAMLMLQARGNVDEAIKLIEKAISIDKSCMFAYETLGTIEVQRGRLEEAVKCFNKA 340
            ++  +   ++ A GN + A+   + AIS+      AY   G       R +EAV  F++ 
Sbjct: 3034 IWEKKGGALMHA-GNYEGAVAAFDHAISLLPDDPGAYLERGRALAALNRNDEAVASFDQV 3092

Query: 341  LPL 343
            L L
Sbjct: 3093 LAL 3095


>gi|434387210|ref|YP_007097821.1| tetratricopeptide repeat protein [Chamaesiphon minutus PCC 6605]
 gi|428018200|gb|AFY94294.1| tetratricopeptide repeat protein [Chamaesiphon minutus PCC 6605]
          Length = 490

 Score = 78.2 bits (191), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 99/407 (24%), Positives = 164/407 (40%), Gaps = 44/407 (10%)

Query: 152 DFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQR 211
           D   A AD + A  +  N  D+Y  RG +  L G    A+ +    + LNP F  A A R
Sbjct: 81  DRVGAIADFNRAIALQSNFVDAYNNRGIVKGLNGDSTGAIADYTSALVLNPKFFEAYANR 140

Query: 212 HFVVHKMIVPGDRERVEQSLKEFRNFVDTHSNVVEACTLFAQVLVDQEDFDGAEEYFNRS 271
            F    +   GDR     +L +F+          +       +L    D  GA   + ++
Sbjct: 141 GFARLNI---GDRA---GALADFQAASAIKPTDPQLAIGKGIILSQNGDKQGAIASYAQA 194

Query: 272 IRVDPENASLYVHRAMLMLQARGNVDEAIKLIEKAISIDKSCMFAYETLGTIEVQRGRLE 331
           I++DP+N   + +R +  L   G+   A+   ++ I++  +   AY   G      G  +
Sbjct: 195 IQLDPKNVDAFYNRGIAKLDL-GDFTGALADFDRVIALRPNYAKAYNGRGKTRELMGDSQ 253

Query: 332 EAVKCFNKALPLARDEAELSHIYSLRDAAIAQMKVCERYNIKKKVSPRSQNITKNEKLAI 391
            A+  FN+A+ L  +    S+ Y              R N +  +  R+  I+  +++A 
Sbjct: 254 AALADFNRAIALNPNS---SNAY------------FNRANAQNSLGNRTGAISDYDRVAS 298

Query: 392 KQLREN----NDIIIRPADKGGKTVVMDKADYTQKMT------------SILNSN--DYE 433
               +     N  II+ A+ G KT  +  ADYT  +              IL S+  + +
Sbjct: 299 INPTDAFAFFNRAIIK-AENGDKTQAI--ADYTTALKLNPKLVEAYNNRGILYSSIGNRQ 355

Query: 434 IIPGDPTKTIEESEKYGNLE-NESGQKHAASDFTKAFADLDEAEKVDPNVADSYYQRGQI 492
               D T+ I+    YG    N     + A ++ KA AD  +    DP  AD Y+ RG  
Sbjct: 356 AAIADYTQAIQLKPNYGTAYLNRGIVYYVAGEYRKAIADYTQGIASDPKNADLYFNRGVS 415

Query: 493 YCLFGQYEEALRNLDKTIALNPNFHVARAQRHFVWTSTLAELMAFSD 539
                +Y++AL + +  I L PN  +A + R  +     A   A  D
Sbjct: 416 LAQLQEYQKALADYNTAIRLQPNNALAYSNRGLLQAQLQANSAATED 462



 Score = 72.8 bits (177), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 75/300 (25%), Positives = 127/300 (42%), Gaps = 30/300 (10%)

Query: 109 IFTSQSTKAIEDLTQLVEDTSVDPKIKVNAHIKRAVVHLHAASDFTKAFADLDEAEKVDP 168
           I  SQ+      +    +   +DPK  V+A   R +  L    DFT A AD D    + P
Sbjct: 176 IILSQNGDKQGAIASYAQAIQLDPK-NVDAFYNRGIAKLDL-GDFTGALADFDRVIALRP 233

Query: 169 NVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPN-----FHVARAQRHFVVHKMIVPGD 223
           N A +Y  RG+   L G  + AL + ++ IALNPN     F+ A AQ + + ++     D
Sbjct: 234 NYAKAYNGRGKTRELMGDSQAALADFNRAIALNPNSSNAYFNRANAQ-NSLGNRTGAISD 292

Query: 224 RERVEQSLKEFRNFVDTHSNVVEACTLFAQVLVDQEDFDGAEEY--FNRSIRVDPENASL 281
            +RV               N  +A   F + ++  E+ D  +    +  +++++P+    
Sbjct: 293 YDRV------------ASINPTDAFAFFNRAIIKAENGDKTQAIADYTTALKLNPKLVEA 340

Query: 282 YVHRAMLMLQARGNVDEAIKLIEKAISIDKSCMFAYETLGTIEVQRGRLEEAVKCFNKAL 341
           Y +R +L   + GN   AI    +AI +  +   AY   G +    G   +A+  + + +
Sbjct: 341 YNNRGILY-SSIGNRQAAIADYTQAIQLKPNYGTAYLNRGIVYYVAGEYRKAIADYTQGI 399

Query: 342 PLARDEAELSHIYSLRDAAIAQM----KVCERYNIKKKVSPRSQNITKNEKLAIKQLREN 397
                 A+L   Y  R  ++AQ+    K    YN   ++ P +     N  L   QL+ N
Sbjct: 400 ASDPKNADL---YFNRGVSLAQLQEYQKALADYNTAIRLQPNNALAYSNRGLLQAQLQAN 456


>gi|313675474|ref|YP_004053470.1| hypothetical protein Ftrac_1372 [Marivirga tractuosa DSM 4126]
 gi|312942172|gb|ADR21362.1| Tetratricopeptide TPR_1 repeat-containing protein [Marivirga
           tractuosa DSM 4126]
          Length = 1579

 Score = 78.2 bits (191), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 93/422 (22%), Positives = 180/422 (42%), Gaps = 55/422 (13%)

Query: 111 TSQSTKAIEDLTQLVEDTSVDPKIKV---NAHIKRAVVHLHAASDFTKAFADLDEAEKVD 167
           + Q  +AI DL + VE  + DP++     NA  K+          F KA    +++EK+ 
Sbjct: 328 SEQLDQAIPDLEKAVELNNEDPQVSYYLGNAQFKKEA--------FDKAITAYNQSEKLG 379

Query: 168 PNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQRHFVVHKMIVPGDRERV 227
                 +  RG+   L G+YE A+++   ++ L  N+  A   R    +K+      E  
Sbjct: 380 YESEVLFNNRGKAKFLLGKYEAAIKDYTTSLGLKANYQTALENRGAAYYKI------EDW 433

Query: 228 EQSLKEFRNFVDTHSNVVEACTLFAQVLVDQEDFDGAEEYFNRSIRVDPENASLYVHRAM 287
           + S+K++   + + ++  +     A+     E++  A   F+++I     +A +Y  R +
Sbjct: 434 DNSIKDYEKAIQSGASDADVFLQLAEAHFKTENYSSAITNFDKAINAGKNDAEVYRKRGI 493

Query: 288 LMLQARGNVDEAIKLIEKAISIDKSCMFAYETLGTIEVQRGRLEEAVKCFNKALPLARDE 347
             L+  GN D+AI     A+    +    ++ LGT + ++G  EEA++   +A+     +
Sbjct: 494 AHLE-EGNNDKAIADFNAAVQRGANDGKIFQLLGTAQFEKGTYEEALQNLERAISFQVSD 552

Query: 348 AELSHIYSLRDAAIAQMKVCERYN----IKKKVSPRSQNITKNEKLAIKQLRENN----D 399
           + L      ++AAIA  K+          KK ++  +++    E+ A+      N     
Sbjct: 553 STL-----YKNAAIASQKLNRNEGAISYFKKAIANGAKSPDVFEQYAVLLYETGNLPEAK 607

Query: 400 IIIRPADKGGKT----------VVMDKADYTQKMTSILNSNDYEIIPGDPTKTIEESEKY 449
           I I  A   G T          + +   ++   ++S+  + D           ++E+E Y
Sbjct: 608 INIERAISAGATGERLFLYKGYLALADENWGAAISSLQKAKD---------GGVKEAELY 658

Query: 450 GNLENESGQKHA-ASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDK 508
               + +G+ +    D+  A   L +A +     A++Y   GQ Y   G Y EA R+L+ 
Sbjct: 659 ----SATGKAYYHKDDYNSAIESLKQALQAGDRSAENYELLGQSYFEVGNYAEAARSLNS 714

Query: 509 TI 510
            I
Sbjct: 715 AI 716



 Score = 58.2 bits (139), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 102/476 (21%), Positives = 185/476 (38%), Gaps = 52/476 (10%)

Query: 89   ESTSSNHTKALARLLRATVYIFTSQSTKAIEDLTQLVEDTSVDPKIKVNAHIKRAVVHLH 148
            +S S N     A L R   Y       +A+ D  + VE +  D     N    +  +  +
Sbjct: 1085 QSLSINENYGQAILNRGNAYFEMEAYQEALNDFEKSVELSQTD-----NDTFTKMGLSYY 1139

Query: 149  AASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALN---PNFH 205
               +F +A   +D+A +     AD +Y RG  Y   G+ E+A  +L++ I      P  +
Sbjct: 1140 KLGNFEQAIVMMDQAYQTGNQSADVFYGRGNAYYSLGEIEKAYSDLNQAITFGDKHPETY 1199

Query: 206  VARAQRHFVVHKM-IVPGDRERVEQ------------------------SLKEFRNFVDT 240
              R + +F   +  +   D  + E+                        +L +F   +  
Sbjct: 1200 FNRGEINFQKEEFELALSDFNKAEEYGSKAERLYFLRAKTHYALDNWQKALADFNLAIAA 1259

Query: 241  HSNVVEACTLFAQVLVDQEDFDGAEEYFNRSIRVDPENASLYVHRAMLMLQARGNVDEAI 300
               + EA  L        +D  GA   +N +I    + A  + +R     Q  GN+++AI
Sbjct: 1260 DKELYEAYALRGNTKFRLDDLTGAINDYNIAIAGGIKEAIYFNNRGKAK-QLNGNLEQAI 1318

Query: 301  KLIEKAISIDKSCMFAYETLGT----IEVQRGRLEEAVKC--FNKALPLARDEAELSHIY 354
            +  ++AI+ D     AYE   +    +E   G +E+  K     +A P A      S+ Y
Sbjct: 1319 EDYDQAIATDGEYARAYENRASARYELENYAGVIEDVEKLEDLEEAGPNAFYIKAESY-Y 1377

Query: 355  SLRDAAIAQMKVCERYNIKKKVSPRSQNITKNEK-LAIKQLRENNDIIIRPADKGGKTVV 413
            ++ D  +  +   ER +I+ +V        +    L ++  +   D   R A+       
Sbjct: 1378 AVED-WVGAISYFER-SIQGEVVKADSYFKRGRSYLEVEDYQAALDDFNRAAEADPSNAS 1435

Query: 414  MDKADYTQKMTSILNSNDYEIIPGDPTKTIE-ESEKYGNLENESGQKHAASDFTKAFADL 472
            +    Y  +    L   D      D +K I  E E      N +  +    ++  A  D 
Sbjct: 1436 I----YLYRAQCYLYLGDVRYAAEDYSKAITLEPENTDAYYNRAILREETENWEGALQDY 1491

Query: 473  DEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNP---NFHVARAQRHF 525
            D+  +++P  A +YY RG +  +   Y+ AL++L+K I LN    +++  R   H+
Sbjct: 1492 DKVVQLNPEDASAYYYRGNVKAVLENYQPALKDLNKAIELNSEDASYYKLRGNIHY 1547



 Score = 54.3 bits (129), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 39/152 (25%), Positives = 73/152 (48%), Gaps = 11/152 (7%)

Query: 65   LSKAKRAFEHEDYLTAIRHCTEEIESTSSNHTKALARLLRATVYIFTSQSTKAIEDLTQL 124
              + +   E EDY  A+       E+  SN   A   L RA  Y++      A ED ++ 
Sbjct: 1404 FKRGRSYLEVEDYQAALDDFNRAAEADPSN---ASIYLYRAQCYLYLGDVRYAAEDYSKA 1460

Query: 125  VEDTSVDPKIKVNAHIKRAVVHLHAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLF 184
            +   +++P+   +A+  RA++      ++  A  D D+  +++P  A +YY RG +  + 
Sbjct: 1461 I---TLEPE-NTDAYYNRAILR-EETENWEGALQDYDKVVQLNPEDASAYYYRGNVKAVL 1515

Query: 185  GQYEEALRNLDKTIALNP---NFHVARAQRHF 213
              Y+ AL++L+K I LN    +++  R   H+
Sbjct: 1516 ENYQPALKDLNKAIELNSEDASYYKLRGNIHY 1547



 Score = 53.9 bits (128), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 77/318 (24%), Positives = 132/318 (41%), Gaps = 47/318 (14%)

Query: 50   ELTNGDTNESHELDLLSKAKRAFEHEDYLTAIRHCTEEIESTSSNHTKALARLLRATV-- 107
            EL   D N++ E    SKA+R +    +L A  H   +      N  KALA    A    
Sbjct: 1213 ELALSDFNKAEEYG--SKAERLY----FLRAKTHYALD------NWQKALADFNLAIAAD 1260

Query: 108  ------YIFTSQSTKAIEDLTQLVEDTSVDPKIKVNAHIKRAVVHLHAA------SDFTK 155
                  Y     +   ++DLT  + D +    I +   IK A+   +         +  +
Sbjct: 1261 KELYEAYALRGNTKFRLDDLTGAINDYN----IAIAGGIKEAIYFNNRGKAKQLNGNLEQ 1316

Query: 156  AFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIAL---NPNFHVARAQRH 212
            A  D D+A   D   A +Y  R         Y   + +++K   L    PN    +A+ +
Sbjct: 1317 AIEDYDQAIATDGEYARAYENRASARYELENYAGVIEDVEKLEDLEEAGPNAFYIKAESY 1376

Query: 213  FVVHKMIVPGDRERVEQSLKEFRNFVDTHSNVVEACTLF--AQVLVDQEDFDGAEEYFNR 270
            + V   +  G     E+S++           VV+A + F   +  ++ ED+  A + FNR
Sbjct: 1377 YAVEDWV--GAISYFERSIQ---------GEVVKADSYFKRGRSYLEVEDYQAALDDFNR 1425

Query: 271  SIRVDPENASLYVHRAMLMLQARGNVDEAIKLIEKAISIDKSCMFAYETLGTIEVQRGRL 330
            +   DP NAS+Y++RA   L   G+V  A +   KAI+++     AY     +  +    
Sbjct: 1426 AAEADPSNASIYLYRAQCYLYL-GDVRYAAEDYSKAITLEPENTDAYYNRAILREETENW 1484

Query: 331  EEAVKCFNKALPLARDEA 348
            E A++ ++K + L  ++A
Sbjct: 1485 EGALQDYDKVVQLNPEDA 1502



 Score = 41.6 bits (96), Expect = 1.1,   Method: Compositional matrix adjust.
 Identities = 85/411 (20%), Positives = 156/411 (37%), Gaps = 87/411 (21%)

Query: 138  AHIKRAVVHLHAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKT 197
            A + R   H +   +++ + ADL++ EK  P V +     G  Y    Q+E+AL N++  
Sbjct: 861  ALLNRGSAH-YKQKNYSASIADLEKTEKKSPEVTE---MLGLAYYKTKQFEKALSNMELA 916

Query: 198  IALNPNFHVARAQRHFVVHKMIVPGDRERVEQSLKEFRNFVDTHSNVVEACTLFAQVLVD 257
            I+      V  A+ H+    ++   D+E   Q++ +F+         +    L+A++   
Sbjct: 917  ISGG----VKNAELHYFKGNILY--DKEEYRQAVNDFQK---AEEGGISEGDLYAKM--- 964

Query: 258  QEDFDGAEEYFNRSIRVDPENASLYVHRAMLMLQARGNVDEAIKLIEKAISIDKSCMFAY 317
                                        A   L   GN  ++ + + KA+    S     
Sbjct: 965  --------------------------GNAFFEL---GNFSQSAEQLRKAVDKGVSDQKVI 995

Query: 318  ETLGTIEVQRGRLEEAVKCFNKALPLARDEAELSHIYS--------LRDAAIAQMKVCER 369
            E LG    +  + EEA K   KA+       +  + Y+         +DA        + 
Sbjct: 996  ENLGNALYEGKKYEEASKFLQKAIGFGTQNPKTHYHYANTLFREDRFKDA-------IKS 1048

Query: 370  YNIKKKVSPRSQNITKNEKLAIKQLRENNDIIIRPADKGGKTVVMDKADYTQKMTSILNS 429
            Y+    +  R + I  N   A  +L +        A +  K  +    +Y Q   +ILN 
Sbjct: 1049 YDEAIGLGQRDEVIYNNRGKAKAKLEQ-----FEAAIQDYKQSLSINENYGQ---AILNR 1100

Query: 430  ND-------YEIIPGDPTKTIEESEKYGNLENESGQKHAAS-----DFTKAFADLDEAEK 477
             +       Y+    D  K++E S+     +N++  K   S     +F +A   +D+A +
Sbjct: 1101 GNAYFEMEAYQEALNDFEKSVELSQ----TDNDTFTKMGLSYYKLGNFEQAIVMMDQAYQ 1156

Query: 478  VDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALN---PNFHVARAQRHF 525
                 AD +Y RG  Y   G+ E+A  +L++ I      P  +  R + +F
Sbjct: 1157 TGNQSADVFYGRGNAYYSLGEIEKAYSDLNQAITFGDKHPETYFNRGEINF 1207


>gi|124024538|ref|YP_001018845.1| hypothetical protein P9303_28501 [Prochlorococcus marinus str. MIT
           9303]
 gi|123964824|gb|ABM79580.1| Hypothetical protein P9303_28501 [Prochlorococcus marinus str. MIT
           9303]
          Length = 706

 Score = 77.8 bits (190), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 88/384 (22%), Positives = 155/384 (40%), Gaps = 78/384 (20%)

Query: 149 AASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVAR 208
           A +D+  A +DL++A +++P  A +Y  RG        Y+ A+ + +K I +NP      
Sbjct: 328 ALNDYQGAISDLNKALEINPQYAPAYENRGNAKKKLKDYQGAITDYNKAIEINP------ 381

Query: 209 AQRHFVVHKMIVPGDRERVEQSLKEFRNFVDTHSNVVEACTLFAQVLVDQEDFDGAEEYF 268
                               Q    F N      N+               D+ GA   +
Sbjct: 382 --------------------QHTGPFNNRGLVKKNL--------------GDYQGAIADY 407

Query: 269 NRSIRVDPENASLYVHRAMLMLQARGNVDEAIKLIEKAISIDKSCMFAYETLGTIEVQRG 328
           N++I +DP++A  Y +R ++  +  G+   AI    KAI+I+      Y   G I+   G
Sbjct: 408 NKAIELDPQHAYAYYNRGIVK-KNLGDYQGAIADYNKAIAINPQLAETYSNRGGIKRVLG 466

Query: 329 RLEEAVKCFNKALPLARDEAELSHIYSLRDAAIAQMKVCERYNIKKKVSPRSQNITKNEK 388
             + A+  FNKA+ +     + +  Y  R  A   +K     + +  ++  S+ IT N +
Sbjct: 467 NYQGAIADFNKAIEI---NPQYAPAYMNRGIAKYDLK-----DYQGAIADYSKAITINPQ 518

Query: 389 LAIKQLRENNDIIIRPADKGGKTVVMDKADYTQKMTSILNSNDYEIIPGDPTKTIEESEK 448
            AI     +N                D+    Q   S LN            + IE + +
Sbjct: 519 HAIAFNNRSN--------------AKDQLGDHQGAISDLN------------RAIEINPQ 552

Query: 449 YGN-LENESGQKHAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLD 507
           + +   N    K+   D   A AD ++A  ++P +A++Y  RG I  + G Y+ A+ + +
Sbjct: 553 FADAFNNRGATKYELGDHQGAIADYNKAIAINPQLAETYSNRGGIKRVLGNYQGAIADYN 612

Query: 508 KTIALNPNFHVARAQRHFVWTSTL 531
           K I ++P +  A   R   W+  L
Sbjct: 613 KAIEIDPQYASAYNNRG--WSKYL 634



 Score = 77.0 bits (188), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 76/317 (23%), Positives = 130/317 (41%), Gaps = 37/317 (11%)

Query: 75  EDYLTAIRHCTEEIESTSSNHTKALARLLRATVYIFTSQSTKAIEDLTQLVEDTSVDPKI 134
           +DY  AI    + IE  +  HT       R  V         AI D  + +E   +DP+ 
Sbjct: 364 KDYQGAITDYNKAIE-INPQHTGPFNN--RGLVKKNLGDYQGAIADYNKAIE---LDPQ- 416

Query: 135 KVNAHIKRAVVHLHAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNL 194
              A+  R +V  +   D+  A AD ++A  ++P +A++Y  RG I  + G Y+ A+ + 
Sbjct: 417 HAYAYYNRGIVKKNLG-DYQGAIADYNKAIAINPQLAETYSNRGGIKRVLGNYQGAIADF 475

Query: 195 DKTIALNPNFHVARAQRHFVVHKM---------------------IVPGDRERVEQSLKE 233
           +K I +NP +  A   R    + +                     I   +R   +  L +
Sbjct: 476 NKAIEINPQYAPAYMNRGIAKYDLKDYQGAIADYSKAITINPQHAIAFNNRSNAKDQLGD 535

Query: 234 FRNFVDTHSNVVEACTLFAQVLVDQ-------EDFDGAEEYFNRSIRVDPENASLYVHRA 286
            +  +   +  +E    FA    ++        D  GA   +N++I ++P+ A  Y +R 
Sbjct: 536 HQGAISDLNRAIEINPQFADAFNNRGATKYELGDHQGAIADYNKAIAINPQLAETYSNRG 595

Query: 287 MLMLQARGNVDEAIKLIEKAISIDKSCMFAYETLGTIEVQRGRLEEAVKCFNKALPLARD 346
            +  +  GN   AI    KAI ID     AY   G  +  +G  ++A+K  NKAL +  +
Sbjct: 596 GIK-RVLGNYQGAIADYNKAIEIDPQYASAYNNRGWSKYLQGDFQDALKDANKALAITPN 654

Query: 347 EAELSHIYSLRDAAIAQ 363
           +        L   A+ Q
Sbjct: 655 DGATLDTRGLAKHALGQ 671


>gi|411119046|ref|ZP_11391426.1| tetratricopeptide repeat protein [Oscillatoriales cyanobacterium
           JSC-12]
 gi|410710909|gb|EKQ68416.1| tetratricopeptide repeat protein [Oscillatoriales cyanobacterium
           JSC-12]
          Length = 502

 Score = 77.8 bits (190), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 87/398 (21%), Positives = 176/398 (44%), Gaps = 40/398 (10%)

Query: 150 ASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARA 209
           A  F +A A   +A ++ PN   ++  R       G+YEEA+ N D+ IAL P+ H A  
Sbjct: 51  AQQFEEAIALYTQALELKPNYYRAWSDRADALKRLGRYEEAVDNCDRAIALCPDRHSAWN 110

Query: 210 QRHFVVHKMIVPGDRERVEQSLKEFRNFVDTHSNVVEACTLFAQVLVDQEDFDGAEEYFN 269
            R   +H +       R E+++  +   V    +   A       L   +    A   ++
Sbjct: 111 HRGIALHHL------GRYEEAIASYDQAVTILPDFHTAWYNRGLSLEKLDRTVEALSSYD 164

Query: 270 RSIRVDPENASLYVHRAMLMLQARGNVDEAIKLIEKAISIDKSCMFAYETLGTIEVQRGR 329
           + +++ P++A  + HR+ L L      +EA+   +  I ++     A++  G +  + G 
Sbjct: 165 KVVQLRPDHAQAWRHRSKL-LHTLKRYNEALSSYDYLIDLNTDDAKAWQQRGDVLKEMGD 223

Query: 330 LEEAVKCFNKALPLARDEAELSHIYSLRDAAIAQMKVCERY-----NIKK--KVSPRSQN 382
           LE A++ ++ AL L  ++A L   +  R + +  +   +RY     +++K  +++P    
Sbjct: 224 LEAALRSYDTALHLMPEDASL---WGDRASVLVDL---QRYPEGLDSLEKALELNPNDAK 277

Query: 383 ITKNEKLAIKQLRENNDIIIRPADKGGKTVVMDKAD--YTQKMTSILNSNDYEIIPGDPT 440
                 +A  +L+  ++ +        +  +  +AD  Y  ++ ++L  + ++       
Sbjct: 278 AWSLRAIACAKLQRQDEAL-----ASCERAIQIQADDYYPWRIRALLFRDLHQF-----E 327

Query: 441 KTIEESEKYGNLENESGQ--KHAASDFTK------AFADLDEAEKVDPNVADSYYQRGQI 492
           + +E  E+   L  +  +   H A+   K      A A  D+A  + P  A  +YQRG  
Sbjct: 328 EEVESCERALALNPKDVELWVHQATALKKLHRYEAAIASYDKALDLQPGDATLWYQRGLA 387

Query: 493 YCLFGQYEEALRNLDKTIALNPNFHVARAQRHFVWTST 530
               G+++ A+ N D+ + L+P+FH A   R +   +T
Sbjct: 388 LRRLGRFDSAIANFDRALTLDPDFHPATQSRLYTLLTT 425



 Score = 62.0 bits (149), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 57/254 (22%), Positives = 119/254 (46%), Gaps = 14/254 (5%)

Query: 145 VHLHAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNF 204
           + LH    + +A A  D+A  + P+   ++Y RG       +  EAL + DK + L P+ 
Sbjct: 114 IALHHLGRYEEAIASYDQAVTILPDFHTAWYNRGLSLEKLDRTVEALSSYDKVVQLRPDH 173

Query: 205 HVARAQRHFVVHKMIVPGDRERVEQSLKEFRNFVDTHSNVVEACTLFAQVLVDQEDFDGA 264
             A   R  ++H +      +R  ++L  +   +D +++  +A      VL +  D + A
Sbjct: 174 AQAWRHRSKLLHTL------KRYNEALSSYDYLIDLNTDDAKAWQQRGDVLKEMGDLEAA 227

Query: 265 EEYFNRSIRVDPENASLYVHRAMLMLQARGNVDEAIKLIEKAISIDKSCMFAYETLGTIE 324
              ++ ++ + PE+ASL+  RA +++  +    E +  +EKA+ ++ +   A+       
Sbjct: 228 LRSYDTALHLMPEDASLWGDRASVLVDLQ-RYPEGLDSLEKALELNPNDAKAWSLRAIAC 286

Query: 325 VQRGRLEEAVKCFNKALPLARDEAELSHIYSL--RDAAIAQMKV--CERYNIKKKVSPRS 380
            +  R +EA+    +A+ +  D+     I +L  RD    + +V  CER      ++P+ 
Sbjct: 287 AKLQRQDEALASCERAIQIQADDYYPWRIRALLFRDLHQFEEEVESCER---ALALNPKD 343

Query: 381 QNITKNEKLAIKQL 394
             +  ++  A+K+L
Sbjct: 344 VELWVHQATALKKL 357



 Score = 48.1 bits (113), Expect = 0.010,   Method: Compositional matrix adjust.
 Identities = 26/88 (29%), Positives = 47/88 (53%), Gaps = 4/88 (4%)

Query: 129 SVDPK-IKVNAHIKRAVVHLHAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQY 187
           +++PK +++  H   A+  LH    +  A A  D+A  + P  A  +YQRG      G++
Sbjct: 338 ALNPKDVELWVHQATALKKLHR---YEAAIASYDKALDLQPGDATLWYQRGLALRRLGRF 394

Query: 188 EEALRNLDKTIALNPNFHVARAQRHFVV 215
           + A+ N D+ + L+P+FH A   R + +
Sbjct: 395 DSAIANFDRALTLDPDFHPATQSRLYTL 422



 Score = 42.7 bits (99), Expect = 0.43,   Method: Compositional matrix adjust.
 Identities = 53/241 (21%), Positives = 104/241 (43%), Gaps = 12/241 (4%)

Query: 117 AIEDLTQLVED-TSVDPKIKVNAHIKRAVVH----LHAASDFTKAFADLDEAEKVDPNVA 171
           ++E L + VE  +S D  +++     +A  H    LH    + +A +  D    ++ + A
Sbjct: 149 SLEKLDRTVEALSSYDKVVQLRPDHAQAWRHRSKLLHTLKRYNEALSSYDYLIDLNTDDA 208

Query: 172 DSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQRHFVVHKMIVPGDRERVEQSL 231
            ++ QRG +    G  E ALR+ D  + L P        R  V+       D +R  + L
Sbjct: 209 KAWQQRGDVLKEMGDLEAALRSYDTALHLMPEDASLWGDRASVL------VDLQRYPEGL 262

Query: 232 KEFRNFVDTHSNVVEACTLFAQVLVDQEDFDGAEEYFNRSIRVDPENASLYVHRAMLMLQ 291
                 ++ + N  +A +L A      +  D A     R+I++  ++   +  RA+L   
Sbjct: 263 DSLEKALELNPNDAKAWSLRAIACAKLQRQDEALASCERAIQIQADDYYPWRIRALLFRD 322

Query: 292 ARGNVDEAIKLIEKAISIDKSCMFAYETLGTIEVQRGRLEEAVKCFNKALPLARDEAELS 351
                +E ++  E+A++++   +  +    T   +  R E A+  ++KAL L   +A L 
Sbjct: 323 LH-QFEEEVESCERALALNPKDVELWVHQATALKKLHRYEAAIASYDKALDLQPGDATLW 381

Query: 352 H 352
           +
Sbjct: 382 Y 382


>gi|330508203|ref|YP_004384631.1| TPR-repeat-containing protein [Methanosaeta concilii GP6]
 gi|328929011|gb|AEB68813.1| TPR-repeat protein [Methanosaeta concilii GP6]
          Length = 722

 Score = 77.8 bits (190), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 53/242 (21%), Positives = 116/242 (47%), Gaps = 11/242 (4%)

Query: 102 LLRATVYIFTSQSTKAIEDLTQLVEDTSVDPKIKVNAHIKRAVVHLHAASDFTKAFADLD 161
           L   T++     + + +E++ + +E  + D     N  I      LH    F +A A  +
Sbjct: 180 LTSKTIWRDKGNAIENLEEINRSIETNAQDADAWRNKGIA-----LHKQGKFNEAVAAYE 234

Query: 162 EAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQRHFVVHKMIVP 221
           +A +++P  + S+  +G +    GQY++A+R  D+ I +NP    + A +   ++     
Sbjct: 235 KAIQINPLDSSSWSGKGAVLDDLGQYDQAIRAYDQAIEINPQDADSFANKGLNLYHY--- 291

Query: 222 GDRERVEQSLKEFRNFVDTHSNVVEACTLFAQVLVDQEDFDGAEEYFNRSIRVDPENASL 281
             + + ++++      +  +  +  A  +   +L  +  +  A E ++++I +DP NAS+
Sbjct: 292 --QAKYDEAIVALDMAIKINPQLAGAWNIKGGILTGRGKYGEAIEAYDKAIELDPLNASI 349

Query: 282 YVHRAMLMLQARGNVDEAIKLIEKAISIDKSCMFAYETLGTIEVQRGRLEEAVKCFNKAL 341
           + +R    +   GN DEA++   +AI ID+   + +    T   ++ + +EA+   NKA+
Sbjct: 350 WNNRGAAFV-GEGNYDEAVRAFNRAIEIDQQNAYYWNAKCTALFKQTKYDEALNAVNKAI 408

Query: 342 PL 343
            L
Sbjct: 409 EL 410



 Score = 45.8 bits (107), Expect = 0.051,   Method: Compositional matrix adjust.
 Identities = 58/272 (21%), Positives = 117/272 (43%), Gaps = 55/272 (20%)

Query: 266 EYFNRSIRVDPENASLYVHRAMLMLQARGNVDEAIKLIEKAISIDKSCMFAYETLGTIEV 325
           E  NRSI  + ++A  + ++  + L  +G  +EA+   EKAI I+     ++   G +  
Sbjct: 197 EEINRSIETNAQDADAWRNKG-IALHKQGKFNEAVAAYEKAIQINPLDSSSWSGKGAVLD 255

Query: 326 QRGRLEEAVKCFNKALPLARDEAE--------LSHIYSLRDAAIAQMKVCERYNIKKKVS 377
             G+ ++A++ +++A+ +   +A+        L H  +  D AI  +      ++  K++
Sbjct: 256 DLGQYDQAIRAYDQAIEINPQDADSFANKGLNLYHYQAKYDEAIVAL------DMAIKIN 309

Query: 378 PRSQNITKNEKLAIKQLRENNDIIIRPADKGGKTVVMDKADYTQKMTSILNSNDYEIIPG 437
           P              QL    +I      KGG  ++  +  Y + + +      Y+    
Sbjct: 310 P--------------QLAGAWNI------KGG--ILTGRGKYGEAIEA------YD---- 337

Query: 438 DPTKTIEESEKYGNLENESGQKHAA-SDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLF 496
              K IE      ++ N  G       ++ +A    + A ++D    ++YY   +   LF
Sbjct: 338 ---KAIELDPLNASIWNNRGAAFVGEGNYDEAVRAFNRAIEIDQQ--NAYYWNAKCTALF 392

Query: 497 GQ--YEEALRNLDKTIALNPNFHVARAQRHFV 526
            Q  Y+EAL  ++K I L+PN+  A+  +  +
Sbjct: 393 KQTKYDEALNAVNKAIELDPNYKAAQTTKTLI 424



 Score = 43.9 bits (102), Expect = 0.23,   Method: Compositional matrix adjust.
 Identities = 52/263 (19%), Positives = 101/263 (38%), Gaps = 46/263 (17%)

Query: 254 VLVDQEDFDGAEEYFNRSIRVDPENASLYVHRAMLMLQARGNVDEAIKLIEKAISIDKSC 313
           VL D   +D A   ++++I ++P++A  + ++ + +   +   DEAI  ++ AI I+   
Sbjct: 253 VLDDLGQYDQAIRAYDQAIEINPQDADSFANKGLNLYHYQAKYDEAIVALDMAIKINPQL 312

Query: 314 MFAYETLGTIEVQRGRLEEAVKCFNKALPLARDEAELSHIYSLRDAAIAQMKVCERYNIK 373
             A+   G I   RG+  EA++ ++KA+ L    A    I++ R AA             
Sbjct: 313 AGAWNIKGGILTGRGKYGEAIEAYDKAIELDPLNAS---IWNNRGAAFVG---------- 359

Query: 374 KKVSPRSQNITKNEKLAIKQLRENNDIIIRPADKGGKTVVMDKADYTQKMTSILNSNDYE 433
                                  N D  +R  ++  +    +   +  K T++     Y+
Sbjct: 360 ---------------------EGNYDEAVRAFNRAIEIDQQNAYYWNAKCTALFKQTKYD 398

Query: 434 IIPGDPTKTIEESEKYGNLENESGQKHAASDFTKAFADLDEAEKVDPNVADSYYQRGQIY 493
                  K IE    Y         +   +   +   + +  E VD       + +G  +
Sbjct: 399 EALNAVNKAIELDPNY------KAAQTTKTLILRKLGNFNTEEAVD------CFGKGVSF 446

Query: 494 CLFGQYEEALRNLDKTIALNPNF 516
              G+Y+EA+   +K I L+P  
Sbjct: 447 HQQGKYDEAILAYNKAIELDPTL 469


>gi|254569410|ref|XP_002491815.1| Component (70 kDa) of the TOM (translocase of outer membrane)
           complex [Komagataella pastoris GS115]
 gi|238031612|emb|CAY69535.1| Component (70 kDa) of the TOM (translocase of outer membrane)
           complex [Komagataella pastoris GS115]
 gi|328351685|emb|CCA38084.1| similar to outer mitochondrial membrane translocase [Komagataella
           pastoris CBS 7435]
          Length = 605

 Score = 77.8 bits (190), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 93/373 (24%), Positives = 161/373 (43%), Gaps = 39/373 (10%)

Query: 22  PSKQFIKTYLKSFPNDPILQPDGLSNGVELTNGDTNESHEL-DLLSKAKRAFEHEDYLTA 80
           PS   I + L SF  D +    G +   E  +GD      L D  +    ++EH D   A
Sbjct: 235 PSASSIASLLGSFTEDSVSDVFG-TEIPEDGSGDKFLYEALQDFKTATADSYEHAD--VA 291

Query: 81  IRHCTE---EIESTSSNHTK---ALARLLRATVYIFTSQSTKAIEDLTQLVEDTSVDPKI 134
           +        ++  +S   TK   A+A       Y   + +  A E L + +E   + P+ 
Sbjct: 292 LNQAVSKYADVTVSSDETTKRRAAMAYEYLGQFYFLKNVTAVAQEHLKRAIE---LSPRP 348

Query: 135 KVNAHIKRAVVHL------HAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYE 188
           +  +H+  A+ ++       A  +F KA A       ++ N  D YYQRGQ+  L G   
Sbjct: 349 R--SHVILALTYIDKDLLNEAEVEFQKAMA-------INANDPDIYYQRGQLSYLRGDLA 399

Query: 189 EALRNLDKTIALNPNFHVARAQRHFVVHKMIVPGDRERVEQSLKEFRNFVDTHSNVVEAC 248
            A  N +    LNP    A  Q   + ++        ++E++++ F     T     E  
Sbjct: 400 NASENFETCKRLNPKNVYAYIQLACISYR------EGKIEEAVERFVQAKRTFPTSPEVP 453

Query: 249 TLFAQVLVDQEDFDGAEEYFNRSIRVDPENASLYVHRAMLM-----LQARGNVDEAIKLI 303
             + ++LVD+ D + A + F+ +I++    +++ +    ++     L  R    +AI+L+
Sbjct: 454 NYYGEILVDKNDTEDAIKQFDIAIKLQRSLSTVSIGALGILNKATILARRNEFPQAIELL 513

Query: 304 EKAISIDKSCMFAYETLGTIEVQRGRLEEAVKCFNKALPLARDEAELSHIYSLRDAAIAQ 363
           E+AI +D     A   L  I++Q  + EEA+  F K   LAR   E  H  S  +AA  Q
Sbjct: 514 EEAIQVDPKSELAAVQLAQIKLQLNQAEEAIVLFEKTAKLARSPEEKQHAISFAEAAKIQ 573

Query: 364 MKVCERYNIKKKV 376
            +V +   + K+V
Sbjct: 574 ARVKKDPALSKRV 586


>gi|434408355|ref|YP_007151419.1| Tetratricopeptide TPR_1 repeat-containing protein [Stanieria
            cyanosphaera PCC 7437]
 gi|428272108|gb|AFZ38048.1| Tetratricopeptide TPR_1 repeat-containing protein [Stanieria
            cyanosphaera PCC 7437]
          Length = 1067

 Score = 77.8 bits (190), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 77/306 (25%), Positives = 139/306 (45%), Gaps = 24/306 (7%)

Query: 90   STSSNHTKALARLLRATVYIFTSQSTKAIEDLTQLVEDTSVDPKIKVNAHIKRAVVHLHA 149
            S +S++TKA     R  VY    +   AI DL + +   S+D +  + A++ R  V+   
Sbjct: 767  SINSDYTKAYYN--RGVVYDQQGKLDLAIADLNKAI---SIDREFAL-AYLNRGAVYADQ 820

Query: 150  ASDFTKAFADLDEAEKVDPNVADS--YYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVA 207
                  A AD ++   +D N  D   YY RG +Y   G+ + AL + DK IA+N N+  A
Sbjct: 821  GK-LDLAIADYNQV--IDLNFDDGIVYYNRGNLYAQQGKLDLALSDYDKAIAINSNYTGA 877

Query: 208  RAQRHFVVHKMIVPGDRERVEQSLKEFRNFVDTHSNVVEACTLFAQVLVDQEDFDGAEEY 267
                    ++  +   + +++ +L ++   +  +SN  E       +   Q + D A   
Sbjct: 878  YFNAKVYYNRGTIYAQQGKLDLALSDYDKAIAINSNYAEVYADRGSIYARQGNPDLALND 937

Query: 268  FNRSIRVDPENASLYVHRAMLMLQARGNVDEAIKLIEKAISIDKSCMFAYETLGTIEVQR 327
            FN++I ++  +   Y  R  + +  +G +D A+    +AI I+ +   AY   GTI + +
Sbjct: 938  FNQAIDLNHNDGDAYYGRGTIYV-TQGQLDLALNDFNQAIDINHNDGDAYYGRGTIYLYQ 996

Query: 328  GRLEEAVKCFNKALPLARDEAELSHIYSLRDAAIAQMKVCERYNIKKKVSPRSQNITKNE 387
             +L+ A+  FN+A+ +  D+A+            A   +   Y  K  +     N+ K +
Sbjct: 997  NKLDLALADFNQAILINPDDAK------------AYGNLALVYQKKGAIEAARANLQKAQ 1044

Query: 388  KLAIKQ 393
            KL I Q
Sbjct: 1045 KLFIAQ 1050



 Score = 73.9 bits (180), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 86/373 (23%), Positives = 153/373 (41%), Gaps = 37/373 (9%)

Query: 144 VVHLHAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPN 203
           VV L   +   +A +  + A  + PN A+ Y Q+G I     +Y EA    ++ I LNP 
Sbjct: 645 VVFLQQLNRLEEALSVTETASSLQPNNANLYNQKGNILFDLERYSEAKLAYNQAIKLNP- 703

Query: 204 FHVARAQRHFVVHKMIVPGDRERVEQSLKEFRNFVDTHSNVVEACTLFAQVLVDQEDFDG 263
                 +  F  ++  V   + + + ++ +F   +  +SN  +         + Q+  D 
Sbjct: 704 ------RSTFYYNRGNVYDQQNKPDLAIVDFNKAISINSNDAKVYINRGLFYIRQDKPDL 757

Query: 264 AEEYFNRSIRVDPENASLYVHRAMLMLQARGNVDEAIKLIEKAISIDKSCMFAYETLGTI 323
           A    N++I ++ +    Y +R ++  Q +G +D AI  + KAISID+    AY   G +
Sbjct: 758 AIADLNKAISINSDYTKAYYNRGVVYDQ-QGKLDLAIADLNKAISIDREFALAYLNRGAV 816

Query: 324 EVQRGRLEEAVKCFNKALPLARDEAELSHIYSLRDAAIAQMKVCERYNIKKKVSPRSQNI 383
              +G+L+ A+  +N+ + L  D+     +Y  R    AQ                    
Sbjct: 817 YADQGKLDLAIADYNQVIDLNFDDG---IVYYNRGNLYAQQG------------------ 855

Query: 384 TKNEKLAIKQLRENNDIIIRPADKGGKTVVMDKADYTQKMTSILNSNDYEIIPGDPTKTI 443
               KL +     +  I I     G      +   Y  + T        ++   D  K I
Sbjct: 856 ----KLDLALSDYDKAIAINSNYTG---AYFNAKVYYNRGTIYAQQGKLDLALSDYDKAI 908

Query: 444 EESEKYGNLENESGQKHA-ASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEA 502
             +  Y  +  + G  +A   +   A  D ++A  ++ N  D+YY RG IY   GQ + A
Sbjct: 909 AINSNYAEVYADRGSIYARQGNPDLALNDFNQAIDLNHNDGDAYYGRGTIYVTQGQLDLA 968

Query: 503 LRNLDKTIALNPN 515
           L + ++ I +N N
Sbjct: 969 LNDFNQAIDINHN 981



 Score = 66.2 bits (160), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 62/257 (24%), Positives = 125/257 (48%), Gaps = 28/257 (10%)

Query: 104 RATVYIFTSQSTKAIEDLTQLVEDTSVDPKIKVNAHIKRAVVHLHA-ASDFTKAFADLDE 162
           R  VY   ++   AI D  + +   S D K+    +I R + ++     D   A ADL++
Sbjct: 711 RGNVYDQQNKPDLAIVDFNKAISINSNDAKV----YINRGLFYIRQDKPDL--AIADLNK 764

Query: 163 AEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQRHFVVHKMIVPG 222
           A  ++ +   +YY RG +Y   G+ + A+ +L+K I+++  F +A   R  V        
Sbjct: 765 AISINSDYTKAYYNRGVVYDQQGKLDLAIADLNKAISIDREFALAYLNRGAVY------A 818

Query: 223 DRERVEQSLKEFRNFVDTH--SNVV--EACTLFAQVLVDQEDFDGAEEYFNRSIRVDPE- 277
           D+ +++ ++ ++   +D +    +V      L+AQ    Q   D A   ++++I ++   
Sbjct: 819 DQGKLDLAIADYNQVIDLNFDDGIVYYNRGNLYAQ----QGKLDLALSDYDKAIAINSNY 874

Query: 278 -----NASLYVHRAMLMLQARGNVDEAIKLIEKAISIDKSCMFAYETLGTIEVQRGRLEE 332
                NA +Y +R  +  Q +G +D A+   +KAI+I+ +    Y   G+I  ++G  + 
Sbjct: 875 TGAYFNAKVYYNRGTIYAQ-QGKLDLALSDYDKAIAINSNYAEVYADRGSIYARQGNPDL 933

Query: 333 AVKCFNKALPLARDEAE 349
           A+  FN+A+ L  ++ +
Sbjct: 934 ALNDFNQAIDLNHNDGD 950



 Score = 58.9 bits (141), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 87/373 (23%), Positives = 156/373 (41%), Gaps = 47/373 (12%)

Query: 173 SYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQRHFVVHKMIVPGDRERVEQSLK 232
           +YY +G       +YE AL++L+      P+F  A       + K++      R+E++L 
Sbjct: 606 AYYGKGLALGYERKYEAALKSLELATETEPSFAAA------FLTKVVFLQQLNRLEEALS 659

Query: 233 EFRNFVDTHSNVVEACTLFAQVLVDQEDFDGAEEYFNRSIRVDPENASLYVHRAMLMLQA 292
                     N          +L D E +  A+  +N++I+++P  ++ Y +R  +  Q 
Sbjct: 660 VTETASSLQPNNANLYNQKGNILFDLERYSEAKLAYNQAIKLNPR-STFYYNRGNVYDQ- 717

Query: 293 RGNVDEAIKLIEKAISIDKSCMFAYETLGTIEVQRGRLEEAVKCFNKALPLARDEAELSH 352
           +   D AI    KAISI+ +    Y   G   +++ + + A+   NKA+ +  D    + 
Sbjct: 718 QNKPDLAIVDFNKAISINSNDAKVYINRGLFYIRQDKPDLAIADLNKAISINSD---YTK 774

Query: 353 IYSLRDAAIAQMKVCERYNIKKKVSPRSQNITKNEKLAIKQLRENNDIIIRPADKGGKTV 412
            Y  R     Q        +   ++  ++ I+ + + A+  L  N   +   AD+G   +
Sbjct: 775 AYYNRGVVYDQQG-----KLDLAIADLNKAISIDREFALAYL--NRGAVY--ADQGKLDL 825

Query: 413 VMDKADYTQKMTSILNSNDYEIIPGDPTKTIEESEKYGNLENESGQKHAASDFTKAFADL 472
            +  ADY Q +   LN +D  +               GNL  + G+         A +D 
Sbjct: 826 AI--ADYNQVID--LNFDDGIVY-----------YNRGNLYAQQGK------LDLALSDY 864

Query: 473 DEAEKVDPNV------ADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQRHFV 526
           D+A  ++ N       A  YY RG IY   G+ + AL + DK IA+N N+    A R  +
Sbjct: 865 DKAIAINSNYTGAYFNAKVYYNRGTIYAQQGKLDLALSDYDKAIAINSNYAEVYADRGSI 924

Query: 527 WTSTLAELMAFSD 539
           +       +A +D
Sbjct: 925 YARQGNPDLALND 937



 Score = 43.1 bits (100), Expect = 0.38,   Method: Compositional matrix adjust.
 Identities = 61/269 (22%), Positives = 112/269 (41%), Gaps = 44/269 (16%)

Query: 264 AEEYFNRSIRVDPENASLYVHRAMLMLQARGNVDEAIKLIEKAISIDKSCMFAYETLGTI 323
           A E F+++I + PE   L  +   L L      + A+K +E A   + S   A+ T    
Sbjct: 588 AVEAFDKAIELKPEFIHLAYYGKGLALGYERKYEAALKSLELATETEPSFAAAFLTKVVF 647

Query: 324 EVQRGRLEEAVKCFNKALPLARDEAELSH-----IYSLRDAAIAQMKVCERYNIKKKVSP 378
             Q  RLEEA+     A  L  + A L +     ++ L   + A++     YN   K++P
Sbjct: 648 LQQLNRLEEALSVTETASSLQPNNANLYNQKGNILFDLERYSEAKLA----YNQAIKLNP 703

Query: 379 RSQNITKNEKLAIKQLRENNDIIIRPADKGGKTVVMDKADYTQKMTSILNSNDYEIIPGD 438
           RS        +  +Q + +  I+                D+ + ++  +NSND ++    
Sbjct: 704 RSTFYYNRGNVYDQQNKPDLAIV----------------DFNKAIS--INSNDAKVYINR 745

Query: 439 PTKTIEESEKYGNLENESGQKHAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQ 498
               I + +                    A ADL++A  ++ +   +YY RG +Y   G+
Sbjct: 746 GLFYIRQDKP-----------------DLAIADLNKAISINSDYTKAYYNRGVVYDQQGK 788

Query: 499 YEEALRNLDKTIALNPNFHVARAQRHFVW 527
            + A+ +L+K I+++  F +A   R  V+
Sbjct: 789 LDLAIADLNKAISIDREFALAYLNRGAVY 817


>gi|113476143|ref|YP_722204.1| hypothetical protein Tery_2526 [Trichodesmium erythraeum IMS101]
 gi|110167191|gb|ABG51731.1| Tetratricopeptide TPR_2 [Trichodesmium erythraeum IMS101]
          Length = 1154

 Score = 77.8 bits (190), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 74/307 (24%), Positives = 146/307 (47%), Gaps = 22/307 (7%)

Query: 65  LSKAKRAFEHEDYLTAIRHCTEEIESTSSNHTKALARLLRATVYIFTSQST--KAIEDLT 122
           +++A  A +  +  +AI  C + ++    +H+ +   L  A    F  Q+    A+    
Sbjct: 349 INQANLALKQGNLASAIASCKQALK-IQPDHSPSYVILGNA----FYQQNNLEAALHAYR 403

Query: 123 QLVEDTSVDPKI-KVNAHIKRAVVHLHAASDFTKAFADLDEAEKVDPNVADSYYQRGQIY 181
           Q +E   +DP++ +V  +I    + L     + +A     +A  + P +A  Y+  G+++
Sbjct: 404 QGLE---IDPELAEVQGNIGSVYLQL---GQYKQALFHYQKAIDLKPGLAGIYWNIGKLF 457

Query: 182 CLFGQYEEALRNLDKTIALNPNFHVARAQRHFVVHKMIVPGDRERVEQSLKEFRNFVDTH 241
              G+ +EA+    K + + P+  +  A  HF +   +V     R+  ++K +   ++  
Sbjct: 458 QCLGKVDEAINAWSKALEIQPD--IVEADFHFKLGNTLV--KLSRINDAIKSYERAINLK 513

Query: 242 SNVVEACTLFAQVLVDQEDFDGAEEYFNRSIRVDPENASLYVHRAMLMLQARGNVDEAIK 301
            +  EA +  A +L ++ D + A  Y+N++++++PE   L+   A  +L  +G+ D+AI 
Sbjct: 514 QDYTEAYSNLANILGEKGDREAAVNYYNQALKINPELKFLHEKLANNLL-LKGDYDQAII 572

Query: 302 LIEKAISIDKSCMFAYETLGTIEVQRGRLEEAVKCFNKALPLARDEAELSHIYSLRDAAI 361
             ++AI  +     AY  LGT    +G L  A++ + KAL L    AE   +YS     I
Sbjct: 573 HYQEAIKYNPKSYDAYANLGTALSNKGLLALALEKYYKALELKPSWAE---VYSRIGHII 629

Query: 362 AQMKVCE 368
            Q K+ E
Sbjct: 630 KQEKMEE 636



 Score = 42.4 bits (98), Expect = 0.59,   Method: Compositional matrix adjust.
 Identities = 82/447 (18%), Positives = 152/447 (34%), Gaps = 130/447 (29%)

Query: 134 IKVNAHIKRAVVHL----HAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEE 189
           +K+  H   A + L     + +   KA     EA  ++PN A  Y   G +Y   G++  
Sbjct: 66  VKIQPHFASAYLTLGNIFQSQNLLEKAINTYYEALSIEPNFAQVYANIGSVYYKLGEFNL 125

Query: 190 ALRNLDKTIALNPNFHVARAQRHFVVHKMIVPGDRERVEQSLKEFRNFVDTHSNVVEACT 249
           A+ N  K + +N                                        SN+     
Sbjct: 126 AISNYQKALEIN----------------------------------------SNLASVQL 145

Query: 250 LFAQVLVDQEDFDGAEEYFNRSIRVDPENASLYVHRAMLMLQARGNVDEAIKLIEKAISI 309
           +   V     +F+ A   + + +++ P++A  Y   A  +     N++ AI   +K++SI
Sbjct: 146 MLGNVFSLIGEFEQAIYCYQKLLQIKPKDAQAYFKLAE-VFALYSNIELAINYYQKSLSI 204

Query: 310 DKSCMFAYETLGTIEVQRGRLEEAVKCFNKALPLARDEAELSHIYSLRDAAIAQMKVCER 369
             +   A+  L  +       +E  K F +    AR+                       
Sbjct: 205 KPNYWEAFLKLSQLIKPEITDQELDKLFTQWQKFARE---------------------NN 243

Query: 370 YNIKKKVSP----RSQNITKNEKLAIKQLRENNDIIIRPADKGGKTVVMDKADYTQKMTS 425
           +NIK+ V      +S N    EKL +KQ +E    II   + G +   ++     QK+ +
Sbjct: 244 HNIKEYVESVIQKQSTNFKDQEKLTVKQYKE---AIISDGENGIELATINLIS-EQKLDN 299

Query: 426 ILNSNDYEIIPGDPTKTIEESEKYGNLE----------------------NESGQKHAAS 463
             N+ D   +  D  + ++++ K+   E                      N++       
Sbjct: 300 FENTYDNFSVHDDVEENLKKNGKFTTFEYQKLESGLTSQILKLPAAEAYINQANLALKQG 359

Query: 464 DFTKAFADLDEAEKVDPN-------VADSYYQR--------------------------- 489
           +   A A   +A K+ P+       + +++YQ+                           
Sbjct: 360 NLASAIASCKQALKIQPDHSPSYVILGNAFYQQNNLEAALHAYRQGLEIDPELAEVQGNI 419

Query: 490 GQIYCLFGQYEEALRNLDKTIALNPNF 516
           G +Y   GQY++AL +  K I L P  
Sbjct: 420 GSVYLQLGQYKQALFHYQKAIDLKPGL 446


>gi|434406141|ref|YP_007149026.1| tetratricopeptide repeat protein [Cylindrospermum stagnale PCC
           7417]
 gi|428260396|gb|AFZ26346.1| tetratricopeptide repeat protein [Cylindrospermum stagnale PCC
           7417]
          Length = 792

 Score = 77.8 bits (190), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 81/385 (21%), Positives = 161/385 (41%), Gaps = 22/385 (5%)

Query: 147 LHAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHV 206
           L AA ++ +A A  D A K+ P+   ++  RG      G+ E+A+ + D+ + + P++H 
Sbjct: 234 LAAAKEYEEAIASYDAALKIQPDKHQAWNNRGIALGNLGRNEDAIASYDQALKIQPDYHQ 293

Query: 207 ARAQRHFVVHKMIVPGDRERVEQSLKEFRNFVDTHSNVVEACTLFAQVLVDQEDFDGAEE 266
           A   R   + ++         E ++  +   +    +  +A       L +   ++ A  
Sbjct: 294 AWYNRGNALDELGC------YEDAIASYDAALKIQPDYHQAWYNRGNDLGNLGRYEDAIA 347

Query: 267 YFNRSIRVDPENASLYVHRAMLMLQARGNVDEAIKLIEKAISIDKSCMFAYETLGTIEVQ 326
            ++ ++++ P+    + +R    L   G  ++ I   ++A+ I      A+   G    +
Sbjct: 348 CYDAALKIQPDKHQAWNNRGN-ALGNLGRYEDEIASYDQALKIQPDDPDAWNNRGIALGK 406

Query: 327 RGRLEEAVKCFNKALPLARDEAELSHIYSLRDAAIAQMKVCE----RYNIKKKVSPRSQN 382
            GR E+A+ C++ AL +  D+      ++ R  A+ ++   E     Y+   K+ P    
Sbjct: 407 LGRYEDAIACYDAALKIQPDD---PGAWNNRGIALGKLGRNEDAIASYDAALKIQPDLHQ 463

Query: 383 ITKNEKLAIKQLRENNDIIIRPADKGGKTVVMDKADYTQKMTSI--LNSNDYEIIPGDPT 440
              N  +A+++L  N D I    D   K    D   +  +   +  L  N+  I   D  
Sbjct: 464 AWYNRGIALRKLGRNEDAIAS-YDAALKIQPDDSDAWYNRGNDLGKLGRNEDAIASYDAA 522

Query: 441 KTIEES--EKYGNLENESGQKHAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQ 498
             I+    + + N  N  G      D   A A  D A K  P++ +++Y RG      G+
Sbjct: 523 LKIQPDLHQAWYNRGNALGNLGRDED---AIASYDAALKFQPDLHEAWYNRGNALGNLGR 579

Query: 499 YEEALRNLDKTIALNPNFHVARAQR 523
            E+A+ + D  +   P++H A   R
Sbjct: 580 NEDAIASYDAALKFQPDYHQAWYNR 604



 Score = 64.3 bits (155), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 78/375 (20%), Positives = 144/375 (38%), Gaps = 48/375 (12%)

Query: 153 FTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQRH 212
           +    A  D+A K+ P+  D++  RG      G+YE+A+   D  + + P+   A   R 
Sbjct: 376 YEDEIASYDQALKIQPDDPDAWNNRGIALGKLGRYEDAIACYDAALKIQPDDPGAWNNRG 435

Query: 213 FVVHKMIVPGDRERVEQSLKEFRNFVDTHSNVVEACTLFAQVLVDQEDFDGAEEYFNRSI 272
             + K+       R E ++  +   +    ++ +A       L      + A   ++ ++
Sbjct: 436 IALGKL------GRNEDAIASYDAALKIQPDLHQAWYNRGIALRKLGRNEDAIASYDAAL 489

Query: 273 RVDPENASLYVHRAMLMLQARGNVDEAIKLIEKAISIDKSCMFAYETLGTIEVQRGRLEE 332
           ++ P+++  + +R    L   G  ++AI   + A+ I      A+   G      GR E+
Sbjct: 490 KIQPDDSDAWYNRGN-DLGKLGRNEDAIASYDAALKIQPDLHQAWYNRGNALGNLGRDED 548

Query: 333 AVKCFNKALPLARDEAELSHIYSLRDAAIAQMKVCE----RYNIKKKVSPRSQNITKNEK 388
           A+  ++ AL    D   L   +  R  A+  +   E     Y+   K  P       N  
Sbjct: 549 AIASYDAALKFQPD---LHEAWYNRGNALGNLGRNEDAIASYDAALKFQPDYHQAWYNRG 605

Query: 389 LAIKQLRENNDIIIRPADKGGKTVVMDKADYTQKMTSILNSNDYEIIPGDPTKTIEESEK 448
           +A+++L  + D+I               A Y   +       DY           E    
Sbjct: 606 IALRKLGRDEDVI---------------ASYDAALKF---QPDYH----------EAWYN 637

Query: 449 YGNLENESGQKHAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDK 508
            GN  +E G       +  A A  D A K  P++  ++Y RG      G+YE+A+ + D 
Sbjct: 638 RGNALDELGC------YEDAIASYDAALKFQPDLHQAWYNRGIALGNLGRYEDAIASYDA 691

Query: 509 TIALNPNFHVARAQR 523
            +   P++H A   R
Sbjct: 692 ALKFQPDYHEAWNNR 706



 Score = 50.1 bits (118), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 40/192 (20%), Positives = 80/192 (41%), Gaps = 7/192 (3%)

Query: 156 AFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQRHFVV 215
           A A  D A K  P++ +++Y RG      G+ E+A+ + D  +   P++H A   R   +
Sbjct: 549 AIASYDAALKFQPDLHEAWYNRGNALGNLGRNEDAIASYDAALKFQPDYHQAWYNRGIAL 608

Query: 216 HKMIVPGDRERVEQSLKEFRNFVDTHSNVVEACTLFAQVLVDQEDFDGAEEYFNRSIRVD 275
            K+       R E  +  +   +    +  EA       L +   ++ A   ++ +++  
Sbjct: 609 RKL------GRDEDVIASYDAALKFQPDYHEAWYNRGNALDELGCYEDAIASYDAALKFQ 662

Query: 276 PENASLYVHRAMLMLQARGNVDEAIKLIEKAISIDKSCMFAYETLGTIEVQRGRLEEAVK 335
           P+    + +R  + L   G  ++AI   + A+        A+   G      GR E+A+ 
Sbjct: 663 PDLHQAWYNRG-IALGNLGRYEDAIASYDAALKFQPDYHEAWNNRGIALGNLGRYEDAIA 721

Query: 336 CFNKALPLARDE 347
            F +A+    D+
Sbjct: 722 SFEEAIKFQPDD 733



 Score = 43.1 bits (100), Expect = 0.40,   Method: Compositional matrix adjust.
 Identities = 33/130 (25%), Positives = 57/130 (43%), Gaps = 16/130 (12%)

Query: 153 FTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQRH 212
           +  A A  D A K  P++  ++Y RG      G+YE+A+ + D  +   P++H A   R 
Sbjct: 648 YEDAIASYDAALKFQPDLHQAWYNRGIALGNLGRYEDAIASYDAALKFQPDYHEAWNNRG 707

Query: 213 FVVHKMIVPGDRERVEQSLKEFRNFV----DTHSNVV-EACTLFAQVLVDQEDFDGAEEY 267
             +      G+  R E ++  F   +    D H     +AC    Q  ++Q     A E 
Sbjct: 708 IAL------GNLGRYEDAIASFEEAIKFQPDDHCAWYNKACYYALQGNIEQ-----ALEN 756

Query: 268 FNRSIRVDPE 277
             ++I ++PE
Sbjct: 757 LQQAINLNPE 766


>gi|366995447|ref|XP_003677487.1| hypothetical protein NCAS_0G02480 [Naumovozyma castellii CBS 4309]
 gi|342303356|emb|CCC71135.1| hypothetical protein NCAS_0G02480 [Naumovozyma castellii CBS 4309]
          Length = 596

 Score = 77.8 bits (190), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 67/240 (27%), Positives = 118/240 (49%), Gaps = 15/240 (6%)

Query: 135 KVNAHIKRAVVHLHAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNL 194
           ++N++I  A++ L    D    FA+ ++A K+D   A  YY RGQ+Y +  QYE+A  + 
Sbjct: 339 RINSYIYMALI-LADKGDTDNYFANYEKAMKLDDKNAALYYHRGQMYFITQQYEKAGEDF 397

Query: 195 DKTIALNPNFHVARAQRHFVVHKMIVPGDRERVEQSLKEFRNFVDTHSNVVEACTLFAQV 254
           DK   L+P       Q   + ++     D E +    +  R F     N  E    +A++
Sbjct: 398 DKAKELDPENIFPYIQLACLSYRENKFDDCETLFSEAR--RKF----PNSSEVPNFYAEI 451

Query: 255 LVDQEDFDGAEEYFNRSIRVDPENASLYVHRAMLMLQAR--------GNVDEAIKLIEKA 306
           L D+ DFD A + + R+I ++ +  +++V  A L+ +A          N  EA  L+E+A
Sbjct: 452 LADKGDFDAALKEYERAIELEKKQDAVHVGIAPLVGKATLLVRTPTVENFVEATSLLEEA 511

Query: 307 ISIDKSCMFAYETLGTIEVQRGRLEEAVKCFNKALPLARDEAELSHIYSLRDAAIAQMKV 366
           +  D     A  +LG +++Q+  ++EA++ F  A  LAR   E     +  +AA  Q ++
Sbjct: 512 VKEDPRSEQAKISLGQLKLQQEDIDEAIELFESAATLARTFEEKLQATTFAEAAKIQKRI 571



 Score = 40.4 bits (93), Expect = 2.4,   Method: Compositional matrix adjust.
 Identities = 20/46 (43%), Positives = 29/46 (63%)

Query: 469 FADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNP 514
           FA+ ++A K+D   A  YY RGQ+Y +  QYE+A  + DK   L+P
Sbjct: 360 FANYEKAMKLDDKNAALYYHRGQMYFITQQYEKAGEDFDKAKELDP 405


>gi|254384605|ref|ZP_04999944.1| conserved hypothetical protein [Streptomyces sp. Mg1]
 gi|194343489|gb|EDX24455.1| conserved hypothetical protein [Streptomyces sp. Mg1]
          Length = 1033

 Score = 77.8 bits (190), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 92/408 (22%), Positives = 169/408 (41%), Gaps = 27/408 (6%)

Query: 118 IEDLTQLVEDTSVDPKIKVNAHIKRAVVHLHAASDFTKAFADLDEAEKVDPNVADSYYQR 177
           I  LT L+    +DP+ +  A   R   H +A + + +A AD + A  +DP    +++ R
Sbjct: 495 IAVLTLLLARAGLDPEGQSLALTLRGRNHRNADA-YPQALADYEHALALDPENERAHFGR 553

Query: 178 GQIYCLFGQYEEALRNLDKTIALNPNFHVARAQRHFVVHKMIVPGDRERVEQSLKEFRNF 237
           G+   L G+ +EA+ +  + + L P      + R   +         ER E+++ +F   
Sbjct: 554 GRTRHLTGRLDEAIADYTRAVELAPEDLTNVSYRGLALQVA------ERYEEAIADFDRS 607

Query: 238 VDTHSNVVEACTLFAQVLVDQEDFDGAEEYFNRSIRVDPENASLYVHRAMLMLQARGNVD 297
           ++  S+   A T           ++ A   FNR++ +DP +A  +  R      + G  +
Sbjct: 608 LELRSDYEWALTSRGATFRLMGRYEEALADFNRAVDLDPGSAWAHASRGA-AFNSMGRYE 666

Query: 298 EAIKLIEKAISIDKSCMFAYETLGTIEVQRGRLEEAVKCFNKALPLARDEAELSHIYSLR 357
           EA+    +AI +     +     G +    GR EEAV  F +A+ L  D     + ++L 
Sbjct: 667 EALADFHRAIELKPDYDWPLAGRGDVYRSLGRHEEAVAEFTRAIALTPD-----YWWALA 721

Query: 358 DAAIAQMKVCERYNIKKKVSPRSQNITKNEKLAIKQLRENNDIIIRPADKGGKTVVMDKA 417
               +   +  R+     V  R+  +  +++ A     +    + RP +        D+A
Sbjct: 722 GCGYSYTSLG-RHEEAVAVFTRAIALAPDDRWAFAGRGDAYRRLGRPEE---SLADFDRA 777

Query: 418 -DYTQKMTSILNS--------NDYEIIPGDPTKTIEESEKYGNLENESGQKHAASDFT-K 467
            D     + +L          + Y     D T+ I      G      G   A  D   +
Sbjct: 778 IDIELTYSWVLARRGDVYRCLDRYGEAEADFTRAIALDPDDGWALTHRGMTRAMLDRQDE 837

Query: 468 AFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPN 515
           A AD D A  +DP+   +   RG  + + G+YE+AL +LD+ + + P+
Sbjct: 838 AVADYDAAIGLDPDDGWALGHRGMSHRMSGRYEQALADLDRAVEITPD 885



 Score = 73.9 bits (180), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 91/414 (21%), Positives = 171/414 (41%), Gaps = 61/414 (14%)

Query: 110 FTSQSTKAIEDLTQLVEDTSVDPKIKVNAHIKRAVVHLHAASDFTKAFADLDEAEKVDPN 169
            T +  +AI D T+ VE   + P+   N   +   + L  A  + +A AD D + ++  +
Sbjct: 559 LTGRLDEAIADYTRAVE---LAPEDLTNVSYR--GLALQVAERYEEAIADFDRSLELRSD 613

Query: 170 VADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQRHFVVHKMIVPGDRERVEQ 229
              +   RG  + L G+YEEAL + ++ + L+P    A A R    + M       R E+
Sbjct: 614 YEWALTSRGATFRLMGRYEEALADFNRAVDLDPGSAWAHASRGAAFNSM------GRYEE 667

Query: 230 SLKEFRNFVDTHSNVVEACTLFAQVLVDQEDFDGAEEYFNRSIRVDPE-----NASLYVH 284
           +L +F   ++   +          V       + A   F R+I + P+         Y +
Sbjct: 668 ALADFHRAIELKPDYDWPLAGRGDVYRSLGRHEEAVAEFTRAIALTPDYWWALAGCGYSY 727

Query: 285 RAMLMLQARGNVDEAIKLIEKAISIDKSCMFAYETLGTIEVQRGRLEEAVKCFNKALPLA 344
            ++      G  +EA+ +  +AI++     +A+   G    + GR EE++  F++A+   
Sbjct: 728 TSL------GRHEEAVAVFTRAIALAPDDRWAFAGRGDAYRRLGRPEESLADFDRAI--- 778

Query: 345 RDEAELSHIYSLRDAAIAQMKVC-ERYNIKKKVSPRSQNITKNEKLAIKQLRENNDIIIR 403
             + EL++ + L  A    +  C +RY   +    R+  +  ++  A+            
Sbjct: 779 --DIELTYSWVL--ARRGDVYRCLDRYGEAEADFTRAIALDPDDGWALTH---------- 824

Query: 404 PADKGGKTVVMDKADYTQKMTSILNSNDYEIIPG-DPTKTIEESEKYGNLENESGQKHAA 462
              +G    ++D+ D            DY+   G DP          G      G  H  
Sbjct: 825 ---RGMTRAMLDRQDEAVA--------DYDAAIGLDPDD--------GWALGHRGMSHRM 865

Query: 463 SD-FTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPN 515
           S  + +A ADLD A ++ P+ +     RG ++ L G ++ AL +L + + L P+
Sbjct: 866 SGRYEQALADLDRAVEITPDDSWPLTSRGLLHRLLGHHDAALADLTRALTLEPD 919



 Score = 66.2 bits (160), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 71/298 (23%), Positives = 118/298 (39%), Gaps = 45/298 (15%)

Query: 104 RATVYIFTSQSTKAIEDLTQLVEDTSVDPKIKVNAHIKRAVVHLHAASDFTKAFADLDEA 163
           R   +    +  +A+ D  + V+   +DP     AH  R     ++   + +A AD   A
Sbjct: 621 RGATFRLMGRYEEALADFNRAVD---LDPG-SAWAHASRGAA-FNSMGRYEEALADFHRA 675

Query: 164 EKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQ---------RH-- 212
            ++ P+       RG +Y   G++EEA+    + IAL P++  A A          RH  
Sbjct: 676 IELKPDYDWPLAGRGDVYRSLGRHEEAVAEFTRAIALTPDYWWALAGCGYSYTSLGRHEE 735

Query: 213 ----FVVHKMIVPGDRE-------------RVEQSLKEFRNFVDTHSNVVEACTLFAQVL 255
               F     + P DR              R E+SL +F   +D              V 
Sbjct: 736 AVAVFTRAIALAPDDRWAFAGRGDAYRRLGRPEESLADFDRAIDIELTYSWVLARRGDVY 795

Query: 256 VDQEDFDGAEEYFNRSIRVDPENASLYVHRAML--MLQARGNVDEAIKLIEKAISIDKSC 313
              + +  AE  F R+I +DP++     HR M   ML  +   DEA+   + AI +D   
Sbjct: 796 RCLDRYGEAEADFTRAIALDPDDGWALTHRGMTRAMLDRQ---DEAVADYDAAIGLDPDD 852

Query: 314 MFAYETLGTIEVQRGRLEEAVKCFNKALPLARDEAE-------LSHIYSLRDAAIAQM 364
            +A    G      GR E+A+   ++A+ +  D++        L  +    DAA+A +
Sbjct: 853 GWALGHRGMSHRMSGRYEQALADLDRAVEITPDDSWPLTSRGLLHRLLGHHDAALADL 910



 Score = 48.1 bits (113), Expect = 0.012,   Method: Compositional matrix adjust.
 Identities = 64/261 (24%), Positives = 111/261 (42%), Gaps = 43/261 (16%)

Query: 274 VDPENASLYVHRAMLMLQARG--NVD---EAIKLIEKAISIDKSCMFAYETLGTIEVQRG 328
           +DPE  SL      L L+ R   N D   +A+   E A+++D     A+   G      G
Sbjct: 507 LDPEGQSL-----ALTLRGRNHRNADAYPQALADYEHALALDPENERAHFGRGRTRHLTG 561

Query: 329 RLEEAVKCFNKALPLARDEAELSHIYSLRDAAIAQMKVCERYNIKKKVSPRSQNITKNEK 388
           RL+EA+  + +A+ LA +  +L+++ S R  A   ++V ERY        RS  +  + +
Sbjct: 562 RLDEAIADYTRAVELAPE--DLTNV-SYRGLA---LQVAERYEEAIADFDRSLELRSDYE 615

Query: 389 LAIKQLRENNDIIIRPADKGGKTVVMDKADYTQKMTSILNSNDYEIIPGDPTKTIEESEK 448
            A+               +G    +M +  Y + +     + D      DP      + +
Sbjct: 616 WALTS-------------RGATFRLMGR--YEEALADFNRAVDL-----DPGSAWAHASR 655

Query: 449 YGNLENESGQKHAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDK 508
            G   N  G+      + +A AD   A ++ P+       RG +Y   G++EEA+    +
Sbjct: 656 -GAAFNSMGR------YEEALADFHRAIELKPDYDWPLAGRGDVYRSLGRHEEAVAEFTR 708

Query: 509 TIALNPNFHVARAQRHFVWTS 529
            IAL P++  A A   + +TS
Sbjct: 709 AIALTPDYWWALAGCGYSYTS 729


>gi|220915045|ref|YP_002490353.1| hypothetical protein [Methylobacterium nodulans ORS 2060]
 gi|219952796|gb|ACL63186.1| TPR repeat-containing protein [Methylobacterium nodulans ORS 2060]
          Length = 392

 Score = 77.8 bits (190), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 85/407 (20%), Positives = 168/407 (41%), Gaps = 63/407 (15%)

Query: 138 AHIKRAVVHLHAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKT 197
            ++ R + + +   ++ +A AD +EA +++P +A +Y  RG +Y    +Y++A+ + +K 
Sbjct: 28  GYLNRGITY-YGNREYEQAIADYNEAIRIEPGLALAYLGRGSVYESRREYDQAMADYNKA 86

Query: 198 IALNPNFHVARAQRHFVVHKMIVPGDRERVEQSLKEFRNFVDTHSNVVEACTLFAQVLVD 257
           I ++P + +A   R  V    +  G+ +R   ++ ++   +       +A      +  +
Sbjct: 87  IRIDPKYAIAYNYRGNV---YVSKGEYDR---AIADYSMAIRIDPEYTDAYDNRGYIYQN 140

Query: 258 QEDFDGAEEYFNRSIRVDPENASLYVHRAMLMLQARGNVDEAIKLIEKAISIDKSCMFAY 317
           + ++D A   +N +IR++PE  S Y +R ++     GN D AI     AI I+ +   AY
Sbjct: 141 KHEYDRAIADYNEAIRINPELVSAYFNRGLIYYNM-GNYDLAIADYGNAIRIEPNHKSAY 199

Query: 318 ETLGTIEVQRGRLEEAVKCFNKALPLARDEAELSHIYSLRDAAIAQMKVCERYNIKKKVS 377
              G     +G  + A+  +++A+                                 ++ 
Sbjct: 200 NNRGLAYFGKGEYDRAISDYDEAI---------------------------------RID 226

Query: 378 PRSQNITKNEKLAIKQLRENNDIIIRPADKG----GKTVVMD---KADYTQKMTSILNSN 430
           P   +   N        R N + II   DK        +++D   +  Y  +     N N
Sbjct: 227 PSYTSAYIN--------RANLNDIIGDIDKALIDYKNVILLDLNHEIAYINRALIYQNKN 278

Query: 431 DYEIIPGDPTKTIEESEKYGN-LENESGQKHAASDFTKAFADLDEAEKVDPNVADSYYQR 489
           +Y++   D    I    K+ N      G  +  +++ +A  D  EA ++DP  A +Y+ R
Sbjct: 279 NYDLAITDCNNAIRIKPKHANSYFIRGGIYYDKTEYDRAAVDYSEAIRIDPKYALAYFNR 338

Query: 490 GQIYCLFGQYEEALRNLDKTIALNP------NFHVARAQRHFVWTST 530
           G  Y    +   +L +  + + L P      NF  ARA      T +
Sbjct: 339 GLAYLNKNEPRRSLTDFAEAVRLKPELEKNDNFLKARADAQAALTRS 385



 Score = 57.8 bits (138), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 55/246 (22%), Positives = 107/246 (43%), Gaps = 12/246 (4%)

Query: 98  ALARLLRATVYIFTSQSTKAIEDLTQLVEDTSVDPKIKVNAHIKRAVVHLHAASDFTKAF 157
           A+A   R  VY+   +  +AI D +  +    +DP+   +A+  R  ++ +   ++ +A 
Sbjct: 94  AIAYNYRGNVYVSKGEYDRAIADYSMAIR---IDPEY-TDAYDNRGYIYQNK-HEYDRAI 148

Query: 158 ADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQRHFVVHK 217
           AD +EA +++P +  +Y+ RG IY   G Y+ A+ +    I + PN   A   R      
Sbjct: 149 ADYNEAIRINPELVSAYFNRGLIYYNMGNYDLAIADYGNAIRIEPNHKSAYNNRGLAYFG 208

Query: 218 MIVPGDRERVEQSLKEFRNFVDTHSNVVEACTLFAQVLVDQEDFDGAEEYFNRSIRVDPE 277
                 +   ++++ ++   +    +   A    A +     D D A   +   I +D  
Sbjct: 209 ------KGEYDRAISDYDEAIRIDPSYTSAYINRANLNDIIGDIDKALIDYKNVILLDLN 262

Query: 278 NASLYVHRAMLMLQARGNVDEAIKLIEKAISIDKSCMFAYETLGTIEVQRGRLEEAVKCF 337
           +   Y++RA L+ Q + N D AI     AI I      +Y   G I   +   + A   +
Sbjct: 263 HEIAYINRA-LIYQNKNNYDLAITDCNNAIRIKPKHANSYFIRGGIYYDKTEYDRAAVDY 321

Query: 338 NKALPL 343
           ++A+ +
Sbjct: 322 SEAIRI 327



 Score = 55.5 bits (132), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 58/273 (21%), Positives = 112/273 (41%), Gaps = 36/273 (13%)

Query: 268 FNRSIRVDPENASLYVHRAMLMLQARGNVDEAIKLIEKAISIDKSCMFAYETLGTIEVQR 327
           +N +IR++P  A  Y+ R  +  ++R   D+A+    KAI ID     AY   G + V +
Sbjct: 49  YNEAIRIEPGLALAYLGRGSVY-ESRREYDQAMADYNKAIRIDPKYAIAYNYRGNVYVSK 107

Query: 328 GRLEEAVKCFNKALPLARDEAELSHIYSLRDAAIAQMKVCERYNIKKKVSPRSQNITKNE 387
           G  + A+  ++ A+   R + E +  Y  R   I Q K    +   + ++  ++ I  N 
Sbjct: 108 GEYDRAIADYSMAI---RIDPEYTDAYDNR-GYIYQNK----HEYDRAIADYNEAIRINP 159

Query: 388 KLAIKQLRENNDIIIRPADKGGKTVVMDKADYTQKMTSILNSNDYEIIPGDPTKTIEESE 447
           +L                           + Y  +     N  +Y++   D    I    
Sbjct: 160 ELV--------------------------SAYFNRGLIYYNMGNYDLAIADYGNAIRIEP 193

Query: 448 KYGNLENESGQKH-AASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNL 506
            + +  N  G  +    ++ +A +D DEA ++DP+   +Y  R  +  + G  ++AL + 
Sbjct: 194 NHKSAYNNRGLAYFGKGEYDRAISDYDEAIRIDPSYTSAYINRANLNDIIGDIDKALIDY 253

Query: 507 DKTIALNPNFHVARAQRHFVWTSTLAELMAFSD 539
              I L+ N  +A   R  ++ +     +A +D
Sbjct: 254 KNVILLDLNHEIAYINRALIYQNKNNYDLAITD 286



 Score = 45.8 bits (107), Expect = 0.063,   Method: Compositional matrix adjust.
 Identities = 24/87 (27%), Positives = 48/87 (55%)

Query: 460 HAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVA 519
           +   ++ +A AD +EA +++P +A +Y  RG +Y    +Y++A+ + +K I ++P + +A
Sbjct: 37  YGNREYEQAIADYNEAIRIEPGLALAYLGRGSVYESRREYDQAMADYNKAIRIDPKYAIA 96

Query: 520 RAQRHFVWTSTLAELMAFSDEFMIPKI 546
              R  V+ S      A +D  M  +I
Sbjct: 97  YNYRGNVYVSKGEYDRAIADYSMAIRI 123


>gi|404318522|ref|ZP_10966455.1| hypothetical protein OantC_10032 [Ochrobactrum anthropi CTS-325]
          Length = 285

 Score = 77.8 bits (190), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 62/212 (29%), Positives = 98/212 (46%), Gaps = 20/212 (9%)

Query: 151 SDFTKAFADLDEAEKVDPNVA-------------DSYYQRGQIYCLFGQYEEALRNLDKT 197
           S  T A + +D+A+    N++             + Y  RG  Y   G+Y+EALR+ D+ 
Sbjct: 37  SSTTTALSTVDKAQGSSENISSLTSVIQSNPRDPEGYNVRGSAYGKSGRYKEALRDFDQA 96

Query: 198 IALNPNFHVARAQRHFVVHKMIVPGDRERVEQSLKEFRNFVDTHSNVVEACTLFAQVLVD 257
           IALNPNF+ A A R  V   M   GD  +   +++++   +  +S    A      V   
Sbjct: 97  IALNPNFYQAYANRALVYRYM---GDSTK---AVQDYSKAIQLNSQYDAAYIGRGNVYRQ 150

Query: 258 QEDFDGAEEYFNRSIRVDPENASLYVHRAMLMLQARGNVDEAIKLIEKAISIDKSCMFAY 317
               D A   FN++I +   +   Y +R  L+ QA+G   +AI+   KAIS++ +    Y
Sbjct: 151 AGRLDQALSDFNQAIALQTTDGRAYHNRG-LIYQAKGQHKQAIEDFSKAISLNSTAPEPY 209

Query: 318 ETLGTIEVQRGRLEEAVKCFNKALPLARDEAE 349
              G   V  G  + A   FN A+ L ++ AE
Sbjct: 210 NGRGISYVALGDYDNAFDDFNTAITLDQNIAE 241



 Score = 54.7 bits (130), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 44/178 (24%), Positives = 84/178 (47%), Gaps = 19/178 (10%)

Query: 104 RATVYIFTSQSTKAIEDLTQLVE-DTSVDPKIKVNAHIKRAVVHLHAASDFTKAFADLDE 162
           RA VY +   STKA++D ++ ++ ++  D      A+I R  V+  A     +A +D ++
Sbjct: 110 RALVYRYMGDSTKAVQDYSKAIQLNSQYDA-----AYIGRGNVYRQAGR-LDQALSDFNQ 163

Query: 163 AEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALN---PNFHVARAQRHFVVHKMI 219
           A  +      +Y+ RG IY   GQ+++A+ +  K I+LN   P  +  R   +  +    
Sbjct: 164 AIALQTTDGRAYHNRGLIYQAKGQHKQAIEDFSKAISLNSTAPEPYNGRGISYVAL---- 219

Query: 220 VPGDRERVEQSLKEFRNFVDTHSNVVEACTLFAQVLVDQEDFDGAEEYFNRSIRVDPE 277
             GD    + +  +F   +    N+ E+    A V     D   A   ++R++++DP+
Sbjct: 220 --GD---YDNAFDDFNTAITLDQNIAESWANQALVYEHNGDKAKAANSYSRAVQLDPK 272



 Score = 52.0 bits (123), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 47/208 (22%), Positives = 97/208 (46%), Gaps = 12/208 (5%)

Query: 103 LRATVYIFTSQSTKAIEDLTQLVEDTSVDPKIKVNAHIKRAVVHLHAASDFTKAFADLDE 162
           +R + Y  + +  +A+ D  Q +   +++P     A+  RA+V+ +   D TKA  D  +
Sbjct: 75  VRGSAYGKSGRYKEALRDFDQAI---ALNPNF-YQAYANRALVYRYMG-DSTKAVQDYSK 129

Query: 163 AEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQRHFVVHKMIVPG 222
           A +++     +Y  RG +Y   G+ ++AL + ++ IAL      A   R  +        
Sbjct: 130 AIQLNSQYDAAYIGRGNVYRQAGRLDQALSDFNQAIALQTTDGRAYHNRGLIYQA----- 184

Query: 223 DRERVEQSLKEFRNFVDTHSNVVEACTLFAQVLVDQEDFDGAEEYFNRSIRVDPENASLY 282
            + + +Q++++F   +  +S   E         V   D+D A + FN +I +D   A  +
Sbjct: 185 -KGQHKQAIEDFSKAISLNSTAPEPYNGRGISYVALGDYDNAFDDFNTAITLDQNIAESW 243

Query: 283 VHRAMLMLQARGNVDEAIKLIEKAISID 310
            ++A L+ +  G+  +A     +A+ +D
Sbjct: 244 ANQA-LVYEHNGDKAKAANSYSRAVQLD 270



 Score = 50.8 bits (120), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 28/78 (35%), Positives = 41/78 (52%), Gaps = 13/78 (16%)

Query: 463 SDFTKAFADLDEAEKVDPNVA-------------DSYYQRGQIYCLFGQYEEALRNLDKT 509
           S  T A + +D+A+    N++             + Y  RG  Y   G+Y+EALR+ D+ 
Sbjct: 37  SSTTTALSTVDKAQGSSENISSLTSVIQSNPRDPEGYNVRGSAYGKSGRYKEALRDFDQA 96

Query: 510 IALNPNFHVARAQRHFVW 527
           IALNPNF+ A A R  V+
Sbjct: 97  IALNPNFYQAYANRALVY 114



 Score = 43.1 bits (100), Expect = 0.39,   Method: Compositional matrix adjust.
 Identities = 29/98 (29%), Positives = 50/98 (51%), Gaps = 1/98 (1%)

Query: 268 FNRSIRVDPENASLYVHRAMLMLQARGNVDEAIKLIEKAISIDKSCMFAYETLGTIEVQR 327
           F+++I ++P     Y +RA L+ +  G+  +A++   KAI ++     AY   G +  Q 
Sbjct: 93  FDQAIALNPNFYQAYANRA-LVYRYMGDSTKAVQDYSKAIQLNSQYDAAYIGRGNVYRQA 151

Query: 328 GRLEEAVKCFNKALPLARDEAELSHIYSLRDAAIAQMK 365
           GRL++A+  FN+A+ L   +    H   L   A  Q K
Sbjct: 152 GRLDQALSDFNQAIALQTTDGRAYHNRGLIYQAKGQHK 189



 Score = 42.4 bits (98), Expect = 0.64,   Method: Compositional matrix adjust.
 Identities = 26/105 (24%), Positives = 51/105 (48%), Gaps = 5/105 (4%)

Query: 104 RATVYIFTSQSTKAIEDLTQLVEDTSVDPKIKVNAHIKRAVVHLHAASDFTKAFADLDEA 163
           R  +Y    Q  +AIED ++ +   S  P+     +  R + ++ A  D+  AF D + A
Sbjct: 178 RGLIYQAKGQHKQAIEDFSKAISLNSTAPE----PYNGRGISYV-ALGDYDNAFDDFNTA 232

Query: 164 EKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVAR 208
             +D N+A+S+  +  +Y   G   +A  +  + + L+P +  A+
Sbjct: 233 ITLDQNIAESWANQALVYEHNGDKAKAANSYSRAVQLDPKYQPAK 277



 Score = 39.3 bits (90), Expect = 5.0,   Method: Compositional matrix adjust.
 Identities = 32/117 (27%), Positives = 50/117 (42%), Gaps = 15/117 (12%)

Query: 423 MTSILNSNDYEIIPGDPTKTIEESEKYGNLENESGQKHAASDFTKAFADLDEAEKVDPNV 482
           +TS++ SN     P DP         YG    +SG+      + +A  D D+A  ++PN 
Sbjct: 59  LTSVIQSN-----PRDPEGYNVRGSAYG----KSGR------YKEALRDFDQAIALNPNF 103

Query: 483 ADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQRHFVWTSTLAELMAFSD 539
             +Y  R  +Y   G   +A+++  K I LN  +  A   R  V+        A SD
Sbjct: 104 YQAYANRALVYRYMGDSTKAVQDYSKAIQLNSQYDAAYIGRGNVYRQAGRLDQALSD 160


>gi|225619900|ref|YP_002721157.1| TPR domain-containing protein [Brachyspira hyodysenteriae WA1]
 gi|225214719|gb|ACN83453.1| TPR domain-containing protein [Brachyspira hyodysenteriae WA1]
          Length = 660

 Score = 77.8 bits (190), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 93/401 (23%), Positives = 179/401 (44%), Gaps = 53/401 (13%)

Query: 116 KAIEDLTQLVEDTSVDPKIKVNAHIKRAVVHLHAASDFTKAFADLDEAEKVDPNVADSYY 175
           +AI+D T  ++D   +  I    +  RA+ + +    F  A  D +   +++ N  DSYY
Sbjct: 192 EAIKDFTIALDDLPNESYI----YYDRALAYSNLNM-FENAINDYNRVIELNKNDIDSYY 246

Query: 176 QRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQRHFVVHKMIVPGDRERVEQSLKEFR 235
            R   Y    +Y++A+ + +K + LNPN       +  V +  +   + E  E+++K+F 
Sbjct: 247 NRALTYSKLEEYDKAIEDYNKVLELNPN------DKEAVYNMALCKQNLELFEEAIKDFN 300

Query: 236 NFVDTHSNVVEACTLFAQVLVDQEDFDGAEEYFNRSIRVDPENASLYVHRAMLMLQARGN 295
           N +D+  N+    +L     ++ E ++ A + F+  I+++P+    Y +R       + +
Sbjct: 301 NIIDS-DNIFVYYSL-GICYLELERYEEAIDNFDAFIKLNPDYPDAYFYRGNAKYDLK-H 357

Query: 296 VDEAIKLIEKAISIDKSCMFAYETLGTIEVQRGRLEEAVKCFNKALPLARDEAELSHIYS 355
            +EAI    K + +DK  + AY     +++     ++A+K F++AL     +++ ++++ 
Sbjct: 358 YEEAIDDYNKTLELDKLYIDAYYERAMVKINLNLYDDAIKDFDEALYNIDSDSDRAYLFY 417

Query: 356 LRDAAIAQMKVCERYNIKKKVSPRSQNITKNEKLAIKQLRENNDIIIRPADKGGKTVVMD 415
           L+  AI        Y I KK     +N T   +L       N+    R   K    +V +
Sbjct: 418 LK--AIV-------YEILKKYDEAIENYTNAIELG------NDCYYKRAIAKHNAGLVKE 462

Query: 416 KADYTQKMTSILNSNDYEIIPGDPTKTIEESEKYGNLENESGQKHAASD---FTKAFADL 472
             D   K    L  ++YEI                     S + +A  D   + +A  D 
Sbjct: 463 SIDDYNKAID-LEPDNYEIY--------------------SYKGNAELDLCLYEEAIKDF 501

Query: 473 DEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALN 513
           D+A +++PN  ++YY RG        YEE+ ++   T+ LN
Sbjct: 502 DKAIELNPNFDEAYYNRGIANDALKNYEESFKDYKMTVKLN 542



 Score = 57.0 bits (136), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 103/430 (23%), Positives = 179/430 (41%), Gaps = 60/430 (13%)

Query: 137 NAHIKRAVVHLHAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDK 196
           NA+  R V   +    + +A  D ++  ++DP+  D+Y+ R   Y     + EA+ + +K
Sbjct: 106 NAYHSRGVSKYNLGL-YEEAIKDFNKTLELDPDFKDAYFIRALSYAKINSHNEAIDDFNK 164

Query: 197 TI----ALNPNFHVAR------------AQRHFVVHKMIVPG------DRERVEQSLKEF 234
            +     +N  ++  R            A + F +    +P       DR     +L  F
Sbjct: 165 LLIEYDEINYIYYYYRGLSKFNLNLFEEAIKDFTIALDDLPNESYIYYDRALAYSNLNMF 224

Query: 235 RNFVDTHSNVVEAC-----TLFAQVLV--DQEDFDGAEEYFNRSIRVDPENASLYVHRAM 287
            N ++ ++ V+E       + + + L     E++D A E +N+ + ++P +    V+   
Sbjct: 225 ENAINDYNRVIELNKNDIDSYYNRALTYSKLEEYDKAIEDYNKVLELNPNDKEA-VYNMA 283

Query: 288 LMLQARGNVDEAIKLIEKAISIDKSCMFAYETLGTIEVQRGRLEEAVKCFNKALPLARDE 347
           L  Q     +EAIK       ID   +F Y +LG   ++  R EEA+  F+  + L  D 
Sbjct: 284 LCKQNLELFEEAIKDFNNI--IDSDNIFVYYSLGICYLELERYEEAIDNFDAFIKLNPDY 341

Query: 348 AELSHIYSLRDAAIAQMKVCER----YNIKKKVSPRSQNITKNEKLAIKQLREN-NDIII 402
            +    Y  R  A   +K  E     YN  K +      I    + A+ ++  N  D  I
Sbjct: 342 PD---AYFYRGNAKYDLKHYEEAIDDYN--KTLELDKLYIDAYYERAMVKINLNLYDDAI 396

Query: 403 RPADKGGKTVVMDK-ADYTQKMTSILNSNDYEIIPGDPTKTIEESEKYGN---LENE--- 455
           +  D+    +  D    Y   + +I+    YEI+     K  E  E Y N   L N+   
Sbjct: 397 KDFDEALYNIDSDSDRAYLFYLKAIV----YEILK----KYDEAIENYTNAIELGNDCYY 448

Query: 456 --SGQKHAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALN 513
             +  KH A    ++  D ++A  ++P+  + Y  +G        YEEA+++ DK I LN
Sbjct: 449 KRAIAKHNAGLVKESIDDYNKAIDLEPDNYEIYSYKGNAELDLCLYEEAIKDFDKAIELN 508

Query: 514 PNFHVARAQR 523
           PNF  A   R
Sbjct: 509 PNFDEAYYNR 518



 Score = 53.9 bits (128), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 59/264 (22%), Positives = 129/264 (48%), Gaps = 27/264 (10%)

Query: 116 KAIEDLTQLVEDTSVDPKIKVNAHIKRAVVHLH------AASDFTKAFADLDEAEKVDPN 169
           +AI+D  + +E   +D K+ ++A+ +RA+V ++      A  DF +A  ++D     D +
Sbjct: 360 EAIDDYNKTLE---LD-KLYIDAYYERAMVKINLNLYDDAIKDFDEALYNIDS----DSD 411

Query: 170 VADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQRHFVVHKMIVPGDRERVEQ 229
            A  +Y +  +Y +  +Y+EA+ N    I L  + +  RA         I   +   V++
Sbjct: 412 RAYLFYLKAIVYEILKKYDEAIENYTNAIELGNDCYYKRA---------IAKHNAGLVKE 462

Query: 230 SLKEFRNFVDTHSNVVEACTLFAQVLVDQEDFDGAEEYFNRSIRVDPENASLYVHRAMLM 289
           S+ ++   +D   +  E  +      +D   ++ A + F+++I ++P     Y +R +  
Sbjct: 463 SIDDYNKAIDLEPDNYEIYSYKGNAELDLCLYEEAIKDFDKAIELNPNFDEAYYNRGIAN 522

Query: 290 LQARGNVDEAIKLIEKAISIDKSCMFAYETLGTIEVQRGRLEEAVKCFNKALPLARDEAE 349
             A  N +E+ K  +  + +++   +A+  LG+  V+    ++A++ F KAL +    +E
Sbjct: 523 -DALKNYEESFKDYKMTVKLNEQHDYAFNNLGSYYVRLKEYDKALENFYKALEI---NSE 578

Query: 350 LSHIYSLRDAAIAQMKVCERYNIK 373
           LS  Y+      +++ + E+ NI+
Sbjct: 579 LSLPYNNIGEVKSRLALKEKNNIE 602



 Score = 45.4 bits (106), Expect = 0.079,   Method: Compositional matrix adjust.
 Identities = 83/360 (23%), Positives = 129/360 (35%), Gaps = 93/360 (25%)

Query: 173 SYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQRHFVVHKMIVPGDRERVEQSLK 232
           +YY  G   C    YEE+L+  DKT+ LN  +  A   R    + +              
Sbjct: 73  AYYNIGTSKCNLKMYEESLKYFDKTLELNDKYGNAYHSRGVSKYNL-------------- 118

Query: 233 EFRNFVDTHSNVVEACTLFAQVLVDQEDFDGAEEYFNRSIRVDPENASLYVHRAMLMLQA 292
                            L+ + + D          FN+++ +DP+    Y  RA+   + 
Sbjct: 119 ----------------GLYEEAIKD----------FNKTLELDPDFKDAYFIRALSYAKI 152

Query: 293 RGN---VDEAIKLIEKAISIDKSCMFAYETLGTIEVQRGRLEEAVKCFNKALPLARDEAE 349
             +   +D+  KL+   I  D+     Y   G  +      EEA+K F  AL    +E  
Sbjct: 153 NSHNEAIDDFNKLL---IEYDEINYIYYYYRGLSKFNLNLFEEAIKDFTIALDDLPNE-- 207

Query: 350 LSHIYSLRDAAIAQMKVCER----YNIKKKVSPRSQNITKNEKLAIKQLRENNDIIIRPA 405
            S+IY  R  A + + + E     YN   +++    +   N  L   +L E         
Sbjct: 208 -SYIYYDRALAYSNLNMFENAINDYNRVIELNKNDIDSYYNRALTYSKLEE--------- 257

Query: 406 DKGGKTVVMDKA--DYTQKMTSILNSNDYEIIPGDPTKTIEESEKYGNLENESGQKHAAS 463
                    DKA  DY + +   LN ND E +                  N +  K    
Sbjct: 258 --------YDKAIEDYNKVLE--LNPNDKEAVY-----------------NMALCKQNLE 290

Query: 464 DFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQR 523
            F +A  D +    +D +    YY  G  Y    +YEEA+ N D  I LNP++  A   R
Sbjct: 291 LFEEAIKDFNNI--IDSDNIFVYYSLGICYLELERYEEAIDNFDAFIKLNPDYPDAYFYR 348


>gi|145537418|ref|XP_001454423.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
 gi|124422183|emb|CAK87026.1| unnamed protein product [Paramecium tetraurelia]
          Length = 537

 Score = 77.8 bits (190), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 92/434 (21%), Positives = 187/434 (43%), Gaps = 44/434 (10%)

Query: 113 QSTKAIEDLTQLVEDTSVDPKIKVNAHIKRAVVHLHAASDFTKAFADLDEAEKVDPNVAD 172
           Q  +AIE   + +    ++PK  ++A   + +  L     + +A    +EA  ++P  A 
Sbjct: 128 QCEEAIECYNEAI---FINPKY-ISAWNGKGIA-LRNLKQYEEAIKCYNEAIYINPKDAS 182

Query: 173 SYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQRHFVVHKMIVPGDRERVEQSLK 232
           ++  +G       Q EEA+   ++ I++NP +  A        +K I   D  + E++++
Sbjct: 183 AWQNKGITLYNLNQNEEAIECYNEAISINPKYVDAWN------NKGIALDDLNQYEEAIE 236

Query: 233 EFRNFVDTHSNVVEACTLFAQVLVDQEDFDGAEEYFNRSIRVDPENASLYVHRAMLMLQA 292
            +   +      V+A       L +   ++ A E +N +I ++P+ A  + ++ + +   
Sbjct: 237 CYNEAISISPKYVDAWYNKGITLGNLNQYNEAIECYNEAISINPKYAEAWNYKGITL--- 293

Query: 293 RGNV---DEAIKLIEKAISIDKSCMFAYETLGTIEVQRGRLEEAVKCFNKALPLARDEAE 349
            GN+   +EAI+   +AISI+    + +   G +     +  EA++C+N+A+ +    AE
Sbjct: 294 -GNLQQYEEAIECYNEAISINPKVDYVWFNKGNVLGNLNQYNEAIECYNEAISINPKYAE 352

Query: 350 LSHIYSLRDAAIAQMKVCER----YNIKKKVSPRSQNITKNEKLAIKQLRE--------N 397
               ++ +  A+  +   E     YN    ++P+      N+   +  L +        N
Sbjct: 353 A---WNNKGIALRNLNQYEEAFKCYNEAISINPKFAEAWYNKGFTLNNLNQFDEAIECFN 409

Query: 398 NDIIIRPADKGGKTVVMDKADYTQKMTSILNSNDYEIIPGDPTKTIEESEKYGNLENESG 457
             I I P              +  K  ++ N N YE       + I  + KY    N+ G
Sbjct: 410 EAISINPKYASA---------WYNKGITLRNLNQYEEAIECYNEAISINPKYAEAWNDKG 460

Query: 458 -QKHAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNF 516
                 + + +A    +EA  ++P  A+++Y +G       QYEEA++  ++ I++NP  
Sbjct: 461 IALRNLNQYEEAIKCYNEAISINPKFAEAWYNKGITLNNLNQYEEAIKCYNEAISINPKV 520

Query: 517 HVAR-AQRHFVWTS 529
             A   Q  F++ S
Sbjct: 521 DYAWYNQGQFIFKS 534



 Score = 70.1 bits (170), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 84/440 (19%), Positives = 190/440 (43%), Gaps = 47/440 (10%)

Query: 117 AIEDLTQLVEDT-SVDPKIKVNAHIKRAVVH----LHAASDFTKAFADLDEAEKVDPNVA 171
           A+ DL Q  E    ++  I +N   ++A+V     L + + +  A    DEA  ++    
Sbjct: 20  ALADLNQYQEAIQCLNEAISINPKYEQALVAKGNALRSLTQYQDASKCYDEAISINFKSD 79

Query: 172 DSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQRHFVVHKMIVPGDRERVEQSL 231
            ++  +G +      YE+A++  ++ I+ NP    A   + + ++      D ++ E+++
Sbjct: 80  AAWIGKGLVLVELNHYEQAIKCYNEAISFNPLSVNAWNNKGYALN------DLKQCEEAI 133

Query: 232 KEFRNFVDTHSNVVEACTLFAQVLVDQEDFDGAEEYFNRSIRVDPENASLYVHRAMLMLQ 291
           + +   +  +   + A       L + + ++ A + +N +I ++P++AS + ++ + +  
Sbjct: 134 ECYNEAIFINPKYISAWNGKGIALRNLKQYEEAIKCYNEAIYINPKDASAWQNKGITLYN 193

Query: 292 ARGNVDEAIKLIEKAISIDKSCMFAYETLGTIEVQRGRLEEAVKCFNKALPLARDEAELS 351
              N +EAI+   +AISI+   + A+   G       + EEA++C+N+A+ ++    +  
Sbjct: 194 LNQN-EEAIECYNEAISINPKYVDAWNNKGIALDDLNQYEEAIECYNEAISISPKYVDAW 252

Query: 352 HIYSLRDAAIAQM-KVCERYNIKKKVSPRSQNITKNEKLAIKQLRE--------NNDIII 402
           +   +    + Q  +  E YN    ++P+       + + +  L++        N  I I
Sbjct: 253 YNKGITLGNLNQYNEAIECYNEAISINPKYAEAWNYKGITLGNLQQYEEAIECYNEAISI 312

Query: 403 RPA------DKGGKTVVMDKAD-------------------YTQKMTSILNSNDYEIIPG 437
            P       +KG     +++ +                   +  K  ++ N N YE    
Sbjct: 313 NPKVDYVWFNKGNVLGNLNQYNEAIECYNEAISINPKYAEAWNNKGIALRNLNQYEEAFK 372

Query: 438 DPTKTIEESEKYGN-LENESGQKHAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLF 496
              + I  + K+     N+    +  + F +A    +EA  ++P  A ++Y +G      
Sbjct: 373 CYNEAISINPKFAEAWYNKGFTLNNLNQFDEAIECFNEAISINPKYASAWYNKGITLRNL 432

Query: 497 GQYEEALRNLDKTIALNPNF 516
            QYEEA+   ++ I++NP +
Sbjct: 433 NQYEEAIECYNEAISINPKY 452



 Score = 67.8 bits (164), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 84/440 (19%), Positives = 182/440 (41%), Gaps = 55/440 (12%)

Query: 124 LVEDTSVDPKIKVNAHIKRAVVHLHAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCL 183
           + +  S++P+ KV      A+  L+    + +A   L+EA  ++P    +   +G     
Sbjct: 1   MSQPISINPQEKVWYDKGTALADLN---QYQEAIQCLNEAISINPKYEQALVAKGNALRS 57

Query: 184 FGQYEEALRNLDKTIALNPNFHVARAQRHFVV---------------------------- 215
             QY++A +  D+ I++N     A   +  V+                            
Sbjct: 58  LTQYQDASKCYDEAISINFKSDAAWIGKGLVLVELNHYEQAIKCYNEAISFNPLSVNAWN 117

Query: 216 HKMIVPGDRERVEQSLKEFRNFVDTHSNVVEACTLFAQVLVDQEDFDGAEEYFNRSIRVD 275
           +K     D ++ E++++ +   +  +   + A       L + + ++ A + +N +I ++
Sbjct: 118 NKGYALNDLKQCEEAIECYNEAIFINPKYISAWNGKGIALRNLKQYEEAIKCYNEAIYIN 177

Query: 276 PENASLYVHRAMLMLQARGNVDEAIKLIEKAISIDKSCMFAYETLGTIEVQRGRLEEAVK 335
           P++AS + ++ + +     N +EAI+   +AISI+   + A+   G       + EEA++
Sbjct: 178 PKDASAWQNKGITLYNLNQN-EEAIECYNEAISINPKYVDAWNNKGIALDDLNQYEEAIE 236

Query: 336 CFNKALPLARDEAELSHIYSLRDAAIAQM-KVCERYNIKKKVSPRSQNITKNEKLAIKQL 394
           C+N+A+ ++    +  +   +    + Q  +  E YN    ++P+       + + +  L
Sbjct: 237 CYNEAISISPKYVDAWYNKGITLGNLNQYNEAIECYNEAISINPKYAEAWNYKGITLGNL 296

Query: 395 RE--------NNDIIIRPADKGGKTVVMDKADYT--QKMTSILNSNDYEIIPGDPTKTIE 444
           ++        N  I I P           K DY    K   + N N Y        + I 
Sbjct: 297 QQYEEAIECYNEAISINP-----------KVDYVWFNKGNVLGNLNQYNEAIECYNEAIS 345

Query: 445 ESEKYGNLENESG-QKHAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEAL 503
            + KY    N  G      + + +AF   +EA  ++P  A+++Y +G       Q++EA+
Sbjct: 346 INPKYAEAWNNKGIALRNLNQYEEAFKCYNEAISINPKFAEAWYNKGFTLNNLNQFDEAI 405

Query: 504 RNLDKTIALNPNFHVARAQR 523
              ++ I++NP +  A   +
Sbjct: 406 ECFNEAISINPKYASAWYNK 425



 Score = 58.5 bits (140), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 44/210 (20%), Positives = 99/210 (47%), Gaps = 12/210 (5%)

Query: 112 SQSTKAIEDLTQLVEDTSVDPKIKVNAHIKRAVVHLHAASDFTKAFADLDEAEKVDPNVA 171
           +Q  +AIE   + +   S++PK     + K   + L   + + +AF   +EA  ++P  A
Sbjct: 331 NQYNEAIECYNEAI---SINPKYAEAWNNKG--IALRNLNQYEEAFKCYNEAISINPKFA 385

Query: 172 DSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQRHFVVHKMIVPGDRERVEQSL 231
           +++Y +G       Q++EA+   ++ I++NP +  A   +   +  +       + E+++
Sbjct: 386 EAWYNKGFTLNNLNQFDEAIECFNEAISINPKYASAWYNKGITLRNL------NQYEEAI 439

Query: 232 KEFRNFVDTHSNVVEACTLFAQVLVDQEDFDGAEEYFNRSIRVDPENASLYVHRAMLMLQ 291
           + +   +  +    EA       L +   ++ A + +N +I ++P+ A  + ++  + L 
Sbjct: 440 ECYNEAISINPKYAEAWNDKGIALRNLNQYEEAIKCYNEAISINPKFAEAWYNKG-ITLN 498

Query: 292 ARGNVDEAIKLIEKAISIDKSCMFAYETLG 321
                +EAIK   +AISI+    +A+   G
Sbjct: 499 NLNQYEEAIKCYNEAISINPKVDYAWYNQG 528


>gi|28564904|gb|AAO32536.1| TOM70 [Naumovozyma castellii]
          Length = 590

 Score = 77.8 bits (190), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 67/240 (27%), Positives = 118/240 (49%), Gaps = 15/240 (6%)

Query: 135 KVNAHIKRAVVHLHAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNL 194
           ++N++I  A++ L    D    FA+ ++A K+D   A  YY RGQ+Y +  QYE+A  + 
Sbjct: 333 RINSYIYMALI-LADKGDTDNYFANYEKAMKLDDKNAALYYHRGQMYFITQQYEKAGEDF 391

Query: 195 DKTIALNPNFHVARAQRHFVVHKMIVPGDRERVEQSLKEFRNFVDTHSNVVEACTLFAQV 254
           DK   L+P       Q   + ++     D E +    +  R F     N  E    +A++
Sbjct: 392 DKAKELDPENIFPYIQLACLSYRENKFDDCETLFSEAR--RKF----PNSSEVPNFYAEI 445

Query: 255 LVDQEDFDGAEEYFNRSIRVDPENASLYVHRAMLMLQAR--------GNVDEAIKLIEKA 306
           L D+ DFD A + + R+I ++ +  +++V  A L+ +A          N  EA  L+E+A
Sbjct: 446 LADKGDFDAALKEYERAIELEKKQDAVHVGIAPLVGKATLLVRTPTVENFVEATSLLEEA 505

Query: 307 ISIDKSCMFAYETLGTIEVQRGRLEEAVKCFNKALPLARDEAELSHIYSLRDAAIAQMKV 366
           +  D     A  +LG +++Q+  ++EA++ F  A  LAR   E     +  +AA  Q ++
Sbjct: 506 VKEDPRSEQAKISLGQLKLQQEDIDEAIELFESAATLARTFEEKLQATTFAEAAKIQKRI 565



 Score = 40.4 bits (93), Expect = 2.4,   Method: Compositional matrix adjust.
 Identities = 20/46 (43%), Positives = 29/46 (63%)

Query: 469 FADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNP 514
           FA+ ++A K+D   A  YY RGQ+Y +  QYE+A  + DK   L+P
Sbjct: 354 FANYEKAMKLDDKNAALYYHRGQMYFITQQYEKAGEDFDKAKELDP 399


>gi|383319448|ref|YP_005380289.1| TPR repeats containing protein [Methanocella conradii HZ254]
 gi|379320818|gb|AFC99770.1| TPR repeats containing protein [Methanocella conradii HZ254]
          Length = 1006

 Score = 77.4 bits (189), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 89/384 (23%), Positives = 168/384 (43%), Gaps = 62/384 (16%)

Query: 151 SDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQ 210
           S   +A  +  EA +  P+ A+++Y  G      G  ++A+R   + + LNP+F    ++
Sbjct: 51  SMLDEAITEYSEAVRQKPDYAEAHYNLGVALDDKGLLDDAIREFREAVRLNPDF----SE 106

Query: 211 RHFVVHKMIVPGDRERVEQSLKEFRNFVDTHSNVVEACTLFAQVLVDQEDFDGAEEYFNR 270
            H+ +   +   D+  ++ ++KE+R  +  + +   A       L  ++  D A   F  
Sbjct: 107 AHYNLG--VALDDKGLLDDAIKEYRESLRLNPDYARAHYSLGIALGKRDQLDEAIHEFKE 164

Query: 271 SIRVDPENASLYVHRAMLMLQAR-GNVDEAIKLIEKAISIDKSCMFAYETLGTIEVQRGR 329
           ++R+ P+N    VH  M ++ AR G +D+AIK    AI++      A+  LG     +G 
Sbjct: 165 ALRLQPDNPE--VHYNMGVVLARKGLIDDAIKAFRDAIALKPDDAEAHYNLGVSLDYKGL 222

Query: 330 LEEAVKCFNKALPLARDEAELSHIYSLRDAAIAQMKVCERYNIKKKVSPRSQNITKNEKL 389
           ++EA+  F + + L  D+AE +H                 YN+   +S +          
Sbjct: 223 IDEAISEFRETVWLKPDDAE-AH-----------------YNLGLALSKKGMFDQ----- 259

Query: 390 AIKQLRENNDIIIRPADKGGKTVVMDKADYTQKMTSILNSNDYEIIPGDPTKTIEESEKY 449
           AI++ RE                V  K DY +   ++    DY+   G   + I+E    
Sbjct: 260 AIREYRE---------------AVRLKPDYAKAHNNLGIVLDYK---GMVDEAIKEYRAA 301

Query: 450 GNLENESGQKH--------AASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEE 501
            NL+ +  + H        + ++  +A  +  EA K+ PN  +++++ G   C  G  ++
Sbjct: 302 VNLKPDDAEAHYNLGVALTSKNELDEAIHEFKEAVKLKPNYPEAHFKLGYALCRKGLLDD 361

Query: 502 ALRNLDKTIALNPNFHVARAQRHF 525
           A+R L + I L P F    A+ H+
Sbjct: 362 AIRELREAIWLRPGF----AEAHY 381



 Score = 62.8 bits (151), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 89/386 (23%), Positives = 167/386 (43%), Gaps = 50/386 (12%)

Query: 153 FTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQRH 212
             +A  +  EA ++ P+ A+++Y    ++   G  ++A+R   + I L P++    A+ H
Sbjct: 495 LDQAIREFREAYRLKPDFAEAFYNLAVVFGKKGLLDDAIREYREAIRLRPDY----AEAH 550

Query: 213 FVVHKMIVPGDRERVEQSLKEFRNFVDTHSNVVEACTLFAQVLVDQEDFDGAEEYFNRSI 272
           + +   I    +  V+ ++KEFR  V    +   A       L  +   D A   +   +
Sbjct: 551 YNL--AIAYSKKNMVDDAIKEFREAVHLRPDDANAHYNLGLALNKKGLLDNAIREYVEVV 608

Query: 273 RVDPENASLYVHRAMLMLQARGNVDEAIKLIEKAISIDKSCMFAYETLGTIEVQRGRLEE 332
           R+ P++A  + + A L L  +G +DEA+K   +AI I      A+  LG    ++G ++E
Sbjct: 609 RLRPDDAKAHNNLA-LALYDKGMLDEAVKEFREAIRIKPEYAEAHYNLGVALDRKGLIDE 667

Query: 333 AVKCFNKALPLARDEAELSH-----IY--SLRDAAIAQMKVCERYNIK-KKVSPRSQ-NI 383
           A+  +  A+ +  +E    +     +Y   L D AI + K  E   +K    S R Q  +
Sbjct: 668 AIGEYLIAIEMKPEEPNAHYSLGMALYKKGLLDDAIKEFK--EVIWLKPDDFSARFQLGL 725

Query: 384 TKNEKL----AIKQLRENNDIIIRPADKG---------GKTVVMDKADYTQKMTSILNSN 430
             NEK     AI++LRE     + P D           G+  ++D A    K    L  +
Sbjct: 726 AFNEKNMLDDAIRELREAAS--MEPGDPAIHYNLGLVLGRKGLLDDAIGEFKAALKLKPD 783

Query: 431 DYEIIPGDPTKTIEESEKYGNLENESGQKHAASDFTKAFADLDEAEKVDPNVADSYYQRG 490
           D           +      G   N  G       +  A  +L EA ++ P+ A+++Y  G
Sbjct: 784 D-----------VNAHYYLGLAYNYKGM------YDDAATELGEALRLKPDDANTHYNLG 826

Query: 491 QIYCLFGQYEEALRNLDKTIALNPNF 516
            +    G++++A+R   + + + P++
Sbjct: 827 VVMANMGRFDDAIREYREALRIKPDY 852



 Score = 60.1 bits (144), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 56/233 (24%), Positives = 107/233 (45%), Gaps = 12/233 (5%)

Query: 117 AIEDLTQLVEDTSVDPKIKVNAHIKRAVVHLHAASDFTKAFADLDEAEKVDPNVADSYYQ 176
           AI +L +       DP I  N  +      L        A  +   A K+ P+  +++Y 
Sbjct: 736 AIRELREAASMEPGDPAIHYNLGLVLGRKGL-----LDDAIGEFKAALKLKPDDVNAHYY 790

Query: 177 RGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQRHFVVHKMIVPGDRERVEQSLKEFRN 236
            G  Y   G Y++A   L + + L P+     A  H+ +   +V  +  R + +++E+R 
Sbjct: 791 LGLAYNYKGMYDDAATELGEALRLKPD----DANTHYNLG--VVMANMGRFDDAIREYRE 844

Query: 237 FVDTHSNVVEACTLFAQVLVDQEDFDGAEEYFNRSIRVDPENASLYVHRAMLMLQARGNV 296
            +    +  +A      VL  +   D A   +  ++R+ P++A+ + +   L    +G +
Sbjct: 845 ALRIKPDYAKAHNNLGIVLDYKGQVDEAIAEYLEAVRLKPDDANAHYNLG-LAYDNKGML 903

Query: 297 DEAIKLIEKAISIDKSCMFAYETLGTIEVQRGRLEEAVKCFNKALPLARDEAE 349
           DEAI+ +++A+ +      A+  LG I  ++G L+EA+  +N A+ L  D AE
Sbjct: 904 DEAIRELKEALRLKPDDANAHYNLGVILGKKGLLKEAIDEYNIAVSLRPDYAE 956



 Score = 57.8 bits (138), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 64/281 (22%), Positives = 131/281 (46%), Gaps = 36/281 (12%)

Query: 145 VHLHAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNF 204
           V L + ++  +A  +  EA K+ PN  +++++ G   C  G  ++A+R L + I L P F
Sbjct: 317 VALTSKNELDEAIHEFKEAVKLKPNYPEAHFKLGYALCRKGLLDDAIRELREAIWLRPGF 376

Query: 205 HVARAQRHFVVHKMIVPGDRERVEQSLKEFRNFVDTHSNVVEACTLFAQVLVDQEDFDGA 264
               A+ H+ +   +V G +  ++ +++E ++ +    +  EA          +   D A
Sbjct: 377 ----AEAHYNLG--VVFGKKNMMDDAIRELKDAIRLRPDYAEAHYNLGLAYDYKGQIDDA 430

Query: 265 EEYFNRSIRVDPENASLYV---HRAMLMLQARGNVDEAIKLIEKAISIDKSCMFAYETLG 321
            + +  ++R+ P+    YV   +   + L  +G +D+ I+   + + +      A+  LG
Sbjct: 431 IKEYKEALRIRPD----YVKARNNLGVALDEKGFLDDTIREFREVVWLKPDDAEAHYNLG 486

Query: 322 TIEVQRGRLEEAVKCFNKALPLARDEAE----LSHIY---SLRDAAIAQMKVCER----- 369
               ++G L++A++ F +A  L  D AE    L+ ++    L D AI + +   R     
Sbjct: 487 LALSKKGSLDQAIREFREAYRLKPDFAEAFYNLAVVFGKKGLLDDAIREYREAIRLRPDY 546

Query: 370 ----YNIKKKVSPRSQNITKNEKLAIKQLRENNDIIIRPAD 406
               YN+   ++   +N+  +   AIK+ RE   + +RP D
Sbjct: 547 AEAHYNL--AIAYSKKNMVDD---AIKEFREA--VHLRPDD 580



 Score = 57.4 bits (137), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 86/394 (21%), Positives = 160/394 (40%), Gaps = 54/394 (13%)

Query: 168 PNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQRHFVVHKMIVPGDRERV 227
           P+ A+++Y  G      G  ++A+R   +   L P+F  A        +  +V G +  +
Sbjct: 476 PDDAEAHYNLGLALSKKGSLDQAIREFREAYRLKPDFAEA------FYNLAVVFGKKGLL 529

Query: 228 EQSLKEFRNFVDTHSNVVEACTLFAQVLVDQEDFDGAEEYFNRSIRVDPENASLYVHRAM 287
           + +++E+R  +    +  EA    A     +   D A + F  ++ + P++A+ + +   
Sbjct: 530 DDAIREYREAIRLRPDYAEAHYNLAIAYSKKNMVDDAIKEFREAVHLRPDDANAHYNLG- 588

Query: 288 LMLQARGNVDEAIKLIEKAISIDKSCMFAYETLGTIEVQRGRLEEAVKCFNKALPLARDE 347
           L L  +G +D AI+   + + +      A+  L      +G L+EAVK F +A+ +  + 
Sbjct: 589 LALNKKGLLDNAIREYVEVVRLRPDDAKAHNNLALALYDKGMLDEAVKEFREAIRIKPEY 648

Query: 348 AELSHIY-------SLRDAAIAQMKVCERYNIKKKVSPRSQNITKNEKLAIKQLRENNDI 400
           AE  +          L D AI +      Y I  ++ P   N   +  +A+ +    +D 
Sbjct: 649 AEAHYNLGVALDRKGLIDEAIGE------YLIAIEMKPEEPNAHYSLGMALYKKGLLDDA 702

Query: 401 IIRPADKGGKTVVMDKA-DYTQKMTSILNSNDYEII--------------PGDPTKTIEE 445
           I     K  K V+  K  D++ +    L  N+  ++              PGDP      
Sbjct: 703 I-----KEFKEVIWLKPDDFSARFQLGLAFNEKNMLDDAIRELREAASMEPGDPAIHY-- 755

Query: 446 SEKYGNLENESGQKHAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRN 505
                NL    G+K    D   A  +   A K+ P+  +++Y  G  Y   G Y++A   
Sbjct: 756 -----NLGLVLGRKGLLDD---AIGEFKAALKLKPDDVNAHYYLGLAYNYKGMYDDAATE 807

Query: 506 LDKTIALNPNFHVARAQRHFVWTSTLAELMAFSD 539
           L + + L P+     A  H+     +A +  F D
Sbjct: 808 LGEALRLKPD----DANTHYNLGVVMANMGRFDD 837



 Score = 56.6 bits (135), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 74/374 (19%), Positives = 162/374 (43%), Gaps = 50/374 (13%)

Query: 155 KAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQRHFV 214
           +A ++  E   + P+ A+++Y  G      G +++A+R   + + L P++  A+A  +  
Sbjct: 225 EAISEFRETVWLKPDDAEAHYNLGLALSKKGMFDQAIREYREAVRLKPDY--AKAHNNL- 281

Query: 215 VHKMIVPGDRERVEQSLKEFRNFVDTHSNVVEACTLFAQVLVDQEDFDGAEEYFNRSIRV 274
               IV   +  V++++KE+R  V+   +  EA       L  + + D A   F  ++++
Sbjct: 282 ---GIVLDYKGMVDEAIKEYRAAVNLKPDDAEAHYNLGVALTSKNELDEAIHEFKEAVKL 338

Query: 275 DPENASLYVHRAMLMLQARGNVDEAIKLIEKAISIDKSCMFAYETLGTIEVQRGRLEEAV 334
            P     +      + + +G +D+AI+ + +AI +      A+  LG +  ++  +++A+
Sbjct: 339 KPNYPEAHFKLGYALCR-KGLLDDAIRELREAIWLRPGFAEAHYNLGVVFGKKNMMDDAI 397

Query: 335 KCFNKALPLARDEAELSHIYSLRDAAIAQMKVCERYNIKKKVSPRSQNITKNEKLAIKQL 394
           +    A+ L  D AE            A   +   Y+ K ++             AIK+ 
Sbjct: 398 RELKDAIRLRPDYAE------------AHYNLGLAYDYKGQIDD-----------AIKEY 434

Query: 395 RENNDIIIRP---ADKGGKTVVMDKADYTQKMTSILNSNDYEIIPGDPTKTIEESEKYGN 451
           +E   + IRP     +    V +D+  +             E++   P    +++E + N
Sbjct: 435 KEA--LRIRPDYVKARNNLGVALDEKGFLDDTIREFR----EVVWLKP----DDAEAHYN 484

Query: 452 LENESGQKHAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIA 511
           L     +K       +A  +  EA ++ P+ A+++Y    ++   G  ++A+R   + I 
Sbjct: 485 LGLALSKK---GSLDQAIREFREAYRLKPDFAEAFYNLAVVFGKKGLLDDAIREYREAIR 541

Query: 512 LNPNFHVARAQRHF 525
           L P++    A+ H+
Sbjct: 542 LRPDY----AEAHY 551



 Score = 42.4 bits (98), Expect = 0.64,   Method: Compositional matrix adjust.
 Identities = 78/385 (20%), Positives = 161/385 (41%), Gaps = 49/385 (12%)

Query: 169 NVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQRHFVVHKMIVPGDRER-V 227
           N+A + Y +G +       +EA++   + I + P +    A+ H+    + V  DR+  +
Sbjct: 620 NLALALYDKGML-------DEAVKEFREAIRIKPEY----AEAHY---NLGVALDRKGLI 665

Query: 228 EQSLKEFRNFVDTHSNVVEACTLFAQVLVDQEDFDGAEEYFNRSIRVDPENASLYVHRAM 287
           ++++ E+   ++       A       L  +   D A + F   I + P++ S       
Sbjct: 666 DEAIGEYLIAIEMKPEEPNAHYSLGMALYKKGLLDDAIKEFKEVIWLKPDDFSARFQLG- 724

Query: 288 LMLQARGNVDEAIKLIEKAISIDKSCMFAYETLGTIEVQRGRLEEAVKCFNKALPLARDE 347
           L    +  +D+AI+ + +A S++      +  LG +  ++G L++A+  F  AL L  D+
Sbjct: 725 LAFNEKNMLDDAIRELREAASMEPGDPAIHYNLGLVLGRKGLLDDAIGEFKAALKLKPDD 784

Query: 348 AELSHIY--------SLRDAAIAQMKVCERYNIKKKVSPRSQNITKNEKLAIKQLRENND 399
              +H Y         + D A  ++    R      + P   N   N  + +  +   +D
Sbjct: 785 VN-AHYYLGLAYNYKGMYDDAATELGEALR------LKPDDANTHYNLGVVMANMGRFDD 837

Query: 400 IIIRPADKGGKTVVMDKADYTQKMTSILNSNDYEIIPGDPTKTIEESEKYGNLENESGQK 459
            I     +  +  +  K DY +   ++    DY+   G   + I E  +   L+ +    
Sbjct: 838 AI-----REYREALRIKPDYAKAHNNLGIVLDYK---GQVDEAIAEYLEAVRLKPDDANA 889

Query: 460 H----AASD----FTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIA 511
           H     A D      +A  +L EA ++ P+ A+++Y  G I    G  +EA+   +  ++
Sbjct: 890 HYNLGLAYDNKGMLDEAIRELKEALRLKPDDANAHYNLGVILGKKGLLKEAIDEYNIAVS 949

Query: 512 LNPNFHVARAQRHFVWTSTLAELMA 536
           L P++  A A  +  +   +A++ A
Sbjct: 950 LRPDY--AEAYYNLGFALDMAQMGA 972



 Score = 41.2 bits (95), Expect = 1.3,   Method: Compositional matrix adjust.
 Identities = 40/194 (20%), Positives = 89/194 (45%), Gaps = 7/194 (3%)

Query: 153 FTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQRH 212
           F +A  +  EA ++ P+ A ++   G +    G  +EA++     + L P+     A+ H
Sbjct: 257 FDQAIREYREAVRLKPDYAKAHNNLGIVLDYKGMVDEAIKEYRAAVNLKPD----DAEAH 312

Query: 213 FVVHKMIVPGDRERVEQSLKEFRNFVDTHSNVVEACTLFAQVLVDQEDFDGAEEYFNRSI 272
           + +   +    +  +++++ EF+  V    N  EA       L  +   D A      +I
Sbjct: 313 YNLGVALTS--KNELDEAIHEFKEAVKLKPNYPEAHFKLGYALCRKGLLDDAIRELREAI 370

Query: 273 RVDPENASLYVHRAMLMLQARGNVDEAIKLIEKAISIDKSCMFAYETLGTIEVQRGRLEE 332
            + P  A  + +  ++  + +  +D+AI+ ++ AI +      A+  LG     +G++++
Sbjct: 371 WLRPGFAEAHYNLGVVFGK-KNMMDDAIRELKDAIRLRPDYAEAHYNLGLAYDYKGQIDD 429

Query: 333 AVKCFNKALPLARD 346
           A+K + +AL +  D
Sbjct: 430 AIKEYKEALRIRPD 443


>gi|359409225|ref|ZP_09201693.1| TPR repeat-containing protein [SAR116 cluster alpha proteobacterium
           HIMB100]
 gi|356675978|gb|EHI48331.1| TPR repeat-containing protein [SAR116 cluster alpha proteobacterium
           HIMB100]
          Length = 658

 Score = 77.4 bits (189), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 84/368 (22%), Positives = 153/368 (41%), Gaps = 62/368 (16%)

Query: 180 IYCL-FGQYEEALRNLDKTIALNPNFHVARAQRHFVVHKMIVPGDRERVEQSLKEFRNFV 238
           + C+  G++ +AL    K +++ P    A  QR   ++ +       R EQ+ +EF+  +
Sbjct: 45  LCCIQLGKFSDALSYSTKILSVQPGLAFAHYQRGTALYYL------RRHEQAYQEFKKVI 98

Query: 239 DTHSNVVEACTLFAQVLVDQEDFDGAEEYFNRSIRVDPENASLYVHRAMLMLQARGNVDE 298
           D   +  EA      +  D +  D A  + NR++ + P ++S   +RA L+L+A G +D+
Sbjct: 99  DIQPDFAEAFIYLGLISKDLQKLDEAVVHLNRAVALKPNDSSAVNNRA-LVLRALGQLDD 157

Query: 299 AIKLIEKAISIDKSCMFAYETLGTIEVQRGRLEEAVKCFNKALPLARDEAELSHIYSLRD 358
           A++ +  AI +D      +   G +  + G  E A+  F++A+ L  D AE     +L +
Sbjct: 158 ALRDLSHAIVLDPQNPSNFNNRGAVWTEHGDCERALGDFDRAVALNPDYAE-----ALFN 212

Query: 359 AAIAQMKVCE------RYNIKKKVSPRSQNITKNEKLAIKQLRENNDIIIRPADKGGKTV 412
             +A+ ++         +N    + P          L +  L+ + + +           
Sbjct: 213 RGVARRQLGRFEEAFADFNKHLSLIPDHAETQNELGLTLFDLKRHEEAL----------A 262

Query: 413 VMDKADYTQKMTSILNSNDYEIIPGDPTKTIEESEKYGNLENESGQKHA-ASDFTKAFAD 471
           + DK                 +I   P K          L N  G  HA    F  A AD
Sbjct: 263 IFDK-----------------MICYHPDK--------AELFNNRGLVHAELGQFETALAD 297

Query: 472 LDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQRHFVWTSTL 531
             +A  + P  A ++  RG +     Q++ AL + +  ++L+P+F  A AQ    W   L
Sbjct: 298 YSKAIALQPEFAAAFSNRGSLRTELHQFDAALADFEHALSLDPDF--AEAQ----WNKAL 351

Query: 532 AELMAFSD 539
             L+ F D
Sbjct: 352 -HLLRFED 358



 Score = 63.5 bits (153), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 60/248 (24%), Positives = 107/248 (43%), Gaps = 11/248 (4%)

Query: 105 ATVYIFTSQSTKAIEDLTQLVEDTSVDPKIKVN---AHIKRAVVHLHAASDFTKAFADLD 161
           A  +I+    +K ++ L + V   +    +K N   A   RA+V L A      A  DL 
Sbjct: 105 AEAFIYLGLISKDLQKLDEAVVHLNRAVALKPNDSSAVNNRALV-LRALGQLDDALRDLS 163

Query: 162 EAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQRHFVVHKMIVP 221
            A  +DP    ++  RG ++   G  E AL + D+ +ALNP++  A   R     ++   
Sbjct: 164 HAIVLDPQNPSNFNNRGAVWTEHGDCERALGDFDRAVALNPDYAEALFNRGVARRQL--- 220

Query: 222 GDRERVEQSLKEFRNFVDTHSNVVEACTLFAQVLVDQEDFDGAEEYFNRSIRVDPENASL 281
               R E++  +F   +    +  E        L D +  + A   F++ I   P+ A L
Sbjct: 221 ---GRFEEAFADFNKHLSLIPDHAETQNELGLTLFDLKRHEEALAIFDKMICYHPDKAEL 277

Query: 282 YVHRAMLMLQARGNVDEAIKLIEKAISIDKSCMFAYETLGTIEVQRGRLEEAVKCFNKAL 341
           + +R ++  +  G  + A+    KAI++      A+   G++  +  + + A+  F  AL
Sbjct: 278 FNNRGLVHAEL-GQFETALADYSKAIALQPEFAAAFSNRGSLRTELHQFDAALADFEHAL 336

Query: 342 PLARDEAE 349
            L  D AE
Sbjct: 337 SLDPDFAE 344



 Score = 47.4 bits (111), Expect = 0.022,   Method: Compositional matrix adjust.
 Identities = 50/216 (23%), Positives = 91/216 (42%), Gaps = 33/216 (15%)

Query: 104 RATVYIFTSQSTKAIEDLTQLVEDTSVDPKIKVNAHIKRAVVHLHAASDFTKAFADLDEA 163
           RA V     Q   A+ DL+  +    +DP+   N + + AV   H   D  +A  D D A
Sbjct: 145 RALVLRALGQLDDALRDLSHAI---VLDPQNPSNFNNRGAVWTEHG--DCERALGDFDRA 199

Query: 164 EKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPN------------FHVARAQR 211
             ++P+ A++ + RG      G++EEA  + +K ++L P+            F + R + 
Sbjct: 200 VALNPDYAEALFNRGVARRQLGRFEEAFADFNKHLSLIPDHAETQNELGLTLFDLKRHEE 259

Query: 212 HFVVH-KMI--------VPGDRERVEQSLKEFRNFVDTHSNVVEACTLFAQVLVDQ---- 258
              +  KMI        +  +R  V   L +F   +  +S  +     FA    ++    
Sbjct: 260 ALAIFDKMICYHPDKAELFNNRGLVHAELGQFETALADYSKAIALQPEFAAAFSNRGSLR 319

Query: 259 ---EDFDGAEEYFNRSIRVDPENASLYVHRAMLMLQ 291
                FD A   F  ++ +DP+ A    ++A+ +L+
Sbjct: 320 TELHQFDAALADFEHALSLDPDFAEAQWNKALHLLR 355


>gi|70607745|ref|YP_256615.1| hypothetical protein Saci_2026 [Sulfolobus acidocaldarius DSM 639]
 gi|68568393|gb|AAY81322.1| conserved TPR domain protein [Sulfolobus acidocaldarius DSM 639]
          Length = 399

 Score = 77.4 bits (189), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 91/400 (22%), Positives = 180/400 (45%), Gaps = 76/400 (19%)

Query: 139 HIKRAVVHLHAASDFTKAFADLDEAEKVDPNVADSYYQR----------GQIYCLFGQ-Y 187
           H  R + + +  +++++A  + DEA +++P  ADS+Y +          G +       Y
Sbjct: 27  HFNRGLAYFNL-NNYSEAIREFDEAIRLNPFHADSHYYKALSLIALQRSGSVNAGISDLY 85

Query: 188 EEALRNLDKTIAL---NPNFHVARAQRHFVVHKMIVPGDRERVEQSLKEFRNFVDTHSNV 244
           E A+   D+ I +   NP +H  +     ++          R  ++L E+++ +  +   
Sbjct: 86  ERAILEFDEAIKIDPKNPEYHYQKGLALEILG---------RQYEALLEYQDAIKLNPRN 136

Query: 245 VEACTLFAQVLVDQEDFDGAEEYFNRSIRVDPENASLYVHRAMLMLQARGNVDEAIKLIE 304
            E     A +L DQE +  A    + +IR++P+N++ Y  +A+L L++ G + EA+  ++
Sbjct: 137 PEYYYRKAIILQDQEKYVDAIAEVDTAIRLNPKNSTYYFRKALL-LKSMGKLKEALDQLD 195

Query: 305 KAISIDKSCMFAYETLGTIEVQRGRLEEAVKCFNKALPLARDEAELSHIYSLRDAAIAQM 364
           KAIS++      Y   G I  +  R ++ +K ++ A+ L+ +  E    Y  R   +   
Sbjct: 196 KAISLNPQVAEYYHQKGLILKELKRYDDVLKDYDNAIKLSPNNPE----YHFRKGVL--- 248

Query: 365 KVCERYNIKKKVSPRSQNITKNEKLAIKQLRENNDIIIRPADKGGKTVVMDKADYTQKMT 424
                             + K EK A+ +L E+  + + P          +  +Y  ++ 
Sbjct: 249 ---------------YYELGKYEK-AVMELEES--VRLNP----------NNPEYHYQLG 280

Query: 425 -SILNSNDYEIIPGDPTKTIEESEKYGNLENESGQKH--------AASDFTKAFADLDEA 475
            ++ +   YE         +EE +K   L+ ++ Q +        A   + KA  + D+A
Sbjct: 281 LALFHVMMYE-------DAVEEFDKAVKLDPQNPQYYYYKGNALKALWKYDKAIKEYDKA 333

Query: 476 EKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPN 515
             ++PN    +YQ+G +    G+YEEA+  LD+ I LNP+
Sbjct: 334 ISLNPNDPLPHYQKGVVLKTLGKYEEAIVELDEAIKLNPD 373



 Score = 77.0 bits (188), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 57/220 (25%), Positives = 109/220 (49%), Gaps = 7/220 (3%)

Query: 127 DTSVDPKIKVNAHIKRAVVHLHAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQ 186
           DT++    K + +  R  + L +     +A   LD+A  ++P VA+ Y+Q+G I     +
Sbjct: 161 DTAIRLNPKNSTYYFRKALLLKSMGKLKEALDQLDKAISLNPQVAEYYHQKGLILKELKR 220

Query: 187 YEEALRNLDKTIALNPNFHVARAQRHFVVHKMIVPGDRERVEQSLKEFRNFVDTHSNVVE 246
           Y++ L++ D  I L+PN      + HF   K ++  +  + E+++ E    V  + N  E
Sbjct: 221 YDDVLKDYDNAIKLSPN----NPEYHF--RKGVLYYELGKYEKAVMELEESVRLNPNNPE 274

Query: 247 ACTLFAQVLVDQEDFDGAEEYFNRSIRVDPENASLYVHRAMLMLQARGNVDEAIKLIEKA 306
                   L     ++ A E F++++++DP+N   Y ++    L+A    D+AIK  +KA
Sbjct: 275 YHYQLGLALFHVMMYEDAVEEFDKAVKLDPQNPQYYYYKGN-ALKALWKYDKAIKEYDKA 333

Query: 307 ISIDKSCMFAYETLGTIEVQRGRLEEAVKCFNKALPLARD 346
           IS++ +    +   G +    G+ EEA+   ++A+ L  D
Sbjct: 334 ISLNPNDPLPHYQKGVVLKTLGKYEEAIVELDEAIKLNPD 373



 Score = 57.0 bits (136), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 92/390 (23%), Positives = 157/390 (40%), Gaps = 64/390 (16%)

Query: 159 DLDEAEKVDPNVADSY---YQRGQIYCLFGQYEEALRNLDKTIALNP---NFHVARAQRH 212
           + DE  + +P+    Y   + RG  Y     Y EA+R  D+ I LNP   + H  +A   
Sbjct: 9   NYDEMGEQNPSQDQGYLYHFNRGLAYFNLNNYSEAIREFDEAIRLNPFHADSHYYKALSL 68

Query: 213 FVVHKM--IVPGDRERVEQSLKEFRNFVDTHSNVVE---ACTLFAQVLVDQEDFDGAEEY 267
             + +   +  G  +  E+++ EF   +       E      L  ++L  Q  ++   EY
Sbjct: 69  IALQRSGSVNAGISDLYERAILEFDEAIKIDPKNPEYHYQKGLALEILGRQ--YEALLEY 126

Query: 268 FNRSIRVDPENASLYVHRAMLMLQARGNVDEAIKLIEKAISIDKSCMFAYETLGTIEVQR 327
              +I+++P N   Y  +A+++      VD AI  ++ AI ++      Y     +    
Sbjct: 127 -QDAIKLNPRNPEYYYRKAIILQDQEKYVD-AIAEVDTAIRLNPKNSTYYFRKALLLKSM 184

Query: 328 GRLEEAVKCFNKALPLARDEAELSHIYSLRDAAIAQMKVCERYNIKKKVSPRSQNITKNE 387
           G+L+EA+   +KA+ L    AE  H   L       +K  +RY+          ++ K+ 
Sbjct: 185 GKLKEALDQLDKAISLNPQVAEYYHQKGLI------LKELKRYD----------DVLKDY 228

Query: 388 KLAIKQLRENNDIIIRPADKGGKTVVMDKADYTQKMTSILNSNDYEIIPGDPTKTIEESE 447
             AIK L  NN     P     K V+                  YE+  G   K + E E
Sbjct: 229 DNAIK-LSPNN-----PEYHFRKGVLY-----------------YEL--GKYEKAVMELE 263

Query: 448 KYGNLENESGQKHAASD--------FTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQY 499
           +   L   + + H            +  A  + D+A K+DP     YY +G       +Y
Sbjct: 264 ESVRLNPNNPEYHYQLGLALFHVMMYEDAVEEFDKAVKLDPQNPQYYYYKGNALKALWKY 323

Query: 500 EEALRNLDKTIALNPNFHVARAQRHFVWTS 529
           ++A++  DK I+LNPN  +   Q+  V  +
Sbjct: 324 DKAIKEYDKAISLNPNDPLPHYQKGVVLKT 353


>gi|145528297|ref|XP_001449948.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
 gi|124417537|emb|CAK82551.1| unnamed protein product [Paramecium tetraurelia]
          Length = 1001

 Score = 77.4 bits (189), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 114/494 (23%), Positives = 203/494 (41%), Gaps = 88/494 (17%)

Query: 64  LLSKAKRAFEHEDYLTAIRHCTEEIESTSSNHTKALARLLRATVYIFTSQSTKAIEDLTQ 123
           L++++    E + +  AI  C E++    S H  AL R  ++      S+   AI+ +  
Sbjct: 260 LIAQSYALCELKQFKQAIEQC-EKVLIQESQHLHALNR--KSVALQNLSEHLDAIQCI-- 314

Query: 124 LVEDTSVDPKIKVNAHIKRAVVHLHAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCL 183
              D ++    + +    R    L        A    D+A ++DP+ A +Y  +G     
Sbjct: 315 ---DVALQKNPEYSVGYFRKGYSLWQQGKNQDAIFIFDKAMQIDPSYASTYNYKGNALND 371

Query: 184 FGQYEEALRNLDKTIALNPNFHVARAQRHFVVHKMIVPGDRERVEQSLKEFRNFVDTHSN 243
             QY EA+   DK I + PN  VA  ++                                
Sbjct: 372 LKQYNEAIVCYDKAIQIYPNDEVAYFKK-------------------------------- 399

Query: 244 VVEACTLFAQVLVDQEDFDGAEEYFNRSIRVDPENASLYVHRAMLMLQARGNVDEAIKLI 303
                      L D + ++ A   ++++I++DP +AS Y ++   +   +   +EAI   
Sbjct: 400 --------GNALSDLKQYNEAIVCYDKAIQLDPNDASFYNNKGNALSDLK-QYNEAIVCY 450

Query: 304 EKAISIDKSCMFAYETLGTIEVQRGRLEEAVKCFNKALPLARDE--AELSHIYSLR---- 357
           +KAI +D +    Y   G       +  EA+ C++KA+   ++   A  S  Y+L     
Sbjct: 451 DKAIQLDPNDEVNYFNKGNALNNLKQYNEAIVCYDKAIQFNKNYSVAHFSKGYALHNLKQ 510

Query: 358 -DAAIAQMKVCERYNIKKKVSPRSQNITKNEKLAIKQLRENNDIIIRPADKGGKTVVMDK 416
            D AI    VC  YN   K+ P   +   N+   +   ++  + I+  ++     + +D 
Sbjct: 511 YDEAI----VC--YNNAIKIDPNYTSAYFNKGTTLHNFKQYKEAIVCYSN----AIELDP 560

Query: 417 AD---YTQKMTSILNSNDY--------EIIPGDPTKTIEESEKYGNLENESGQKHAASDF 465
           +D   YT K  ++ +   Y        + I  DP   +   +K GN  ++  Q + A  F
Sbjct: 561 SDASVYTHKGNALSDLKQYNEAIVCYDKAIQLDPNDEVAYFKK-GNALSDLKQYNIAIVF 619

Query: 466 TKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQRHF 525
                  D+A ++DPN   +YY++G       QY+EA+   DK I LNPN  VA    +F
Sbjct: 620 ------YDKAIQLDPNDEVAYYKKGSALNDLKQYKEAIFCYDKAIQLNPNCQVA----YF 669

Query: 526 VWTSTLAELMAFSD 539
              +TL +L  +++
Sbjct: 670 NKGNTLQDLQQYNE 683



 Score = 76.3 bits (186), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 94/422 (22%), Positives = 170/422 (40%), Gaps = 39/422 (9%)

Query: 117 AIEDLTQLVED-TSVDPKIKVN-----AHIKRAVVHLHAASDFTKAFADLDEAEKVDPNV 170
           A+ +L Q  E     D  I+ N     AH  +    LH    + +A    + A K+DPN 
Sbjct: 470 ALNNLKQYNEAIVCYDKAIQFNKNYSVAHFSKGYA-LHNLKQYDEAIVCYNNAIKIDPNY 528

Query: 171 ADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQRHFVVHKMIVPGDRERVEQS 230
             +Y+ +G     F QY+EA+      I L+P      +      HK     D ++  ++
Sbjct: 529 TSAYFNKGTTLHNFKQYKEAIVCYSNAIELDP------SDASVYTHKGNALSDLKQYNEA 582

Query: 231 LKEFRNFVDTHSNVVEACTLFAQVLVDQEDFDGAEEYFNRSIRVDPENASLYVHRAMLML 290
           +  +   +    N   A       L D + ++ A  +++++I++DP +   Y  +    L
Sbjct: 583 IVCYDKAIQLDPNDEVAYFKKGNALSDLKQYNIAIVFYDKAIQLDPNDEVAYYKKGS-AL 641

Query: 291 QARGNVDEAIKLIEKAISIDKSCMFAYETLGTIEVQRGRLEEAVKCFNKALPLARDEAEL 350
                  EAI   +KAI ++ +C  AY   G       +  E++ C++KA+ +  ++AE 
Sbjct: 642 NDLKQYKEAIFCYDKAIQLNPNCQVAYFNKGNTLQDLQQYNESIACYDKAIEIDPNQAEF 701

Query: 351 SHIYSLRDAAIAQMK----VCERYNIKKKVSPRSQNITKNEKLAIKQLRENNDIIIR--- 403
              Y  +   +  +K      E Y+   K+      I   +   +  L+  N+ I     
Sbjct: 702 ---YLQKGKVLHDLKNYKDALECYDKGIKLDSSQTLIYNYKGRTLHNLKSYNEAIFYYNN 758

Query: 404 --PADKGGKTVVMDKA----DYTQKMTSILNSNDYEIIPGDPTKTIEESEKYGNLENESG 457
               D+       +K     D  Q   +I++ +  E I  DP+  I          N+  
Sbjct: 759 AIKLDRNYAMAYNNKGRALHDLKQYNEAIISYD--EAIKKDPSLAIA-------FNNKGR 809

Query: 458 QKHAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFH 517
             H    +  +    D A ++D N A +Y  +G+      QY +A+   DK I ++PNF 
Sbjct: 810 ALHDLQKYNDSLQCYDTAIQIDQNFAIAYNNKGRALYNLKQYTDAIVCYDKAIQIDPNFT 869

Query: 518 VA 519
           +A
Sbjct: 870 IA 871



 Score = 73.9 bits (180), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 107/441 (24%), Positives = 186/441 (42%), Gaps = 90/441 (20%)

Query: 105 ATVYIFTSQSTKAIEDLTQLVE-----DTSV--DPKIKVNAHIKRAVVHLHAASDFTK-- 155
           A+VY   +    A+ DL Q  E     D ++  DP  +V A+ K+     +A SD  +  
Sbjct: 563 ASVY---THKGNALSDLKQYNEAIVCYDKAIQLDPNDEV-AYFKKG----NALSDLKQYN 614

Query: 156 -AFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQRHFV 214
            A    D+A ++DPN   +YY++G       QY+EA+   DK I LNPN  VA   +   
Sbjct: 615 IAIVFYDKAIQLDPNDEVAYYKKGSALNDLKQYKEAIFCYDKAIQLNPNCQVAYFNKGNT 674

Query: 215 VHKMIVPGDRERVEQSLKEFRNFVDTHSNVVEACTLFAQVLVDQEDFDGAEEYFNRSIRV 274
           +       D ++  +S+  +   ++   N  E      +VL D +++  A E +++ I++
Sbjct: 675 LQ------DLQQYNESIACYDKAIEIDPNQAEFYLQKGKVLHDLKNYKDALECYDKGIKL 728

Query: 275 DPENASLYVHRAMLMLQARGNVDEAIKLIEKAISIDKSCMFAYETLGTIEVQRGRLEEAV 334
           D     +Y ++   +   +   +EAI     AI +D++   AY         +GR    +
Sbjct: 729 DSSQTLIYNYKGRTLHNLKS-YNEAIFYYNNAIKLDRNYAMAYNN-------KGRALHDL 780

Query: 335 KCFNKALPLARDEA-----ELSHIYSLRDAAIAQMKVCERYNIKKKVSPRSQNITKNEKL 389
           K +N+A+ ++ DEA      L+  ++ +  A+  +   ++YN   +    +  I +N  +
Sbjct: 781 KQYNEAI-ISYDEAIKKDPSLAIAFNNKGRALHDL---QKYNDSLQCYDTAIQIDQNFAI 836

Query: 390 A-------IKQLRENNDIIIRPADKGGKTVVMDKADYTQKMTSILNSNDYEIIPGDPTKT 442
           A       +  L++  D I          V  DKA                 I  DP  T
Sbjct: 837 AYNNKGRALYNLKQYTDAI----------VCYDKA-----------------IQIDPNFT 869

Query: 443 IEESEKYGNLENESGQKHAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCL------- 495
           I  + K   L       H    +  A A  D+A ++DPN   +Y  +GQ Y +       
Sbjct: 870 IAYNNKGKAL-------HNLKQYKDAIACYDKAIQIDPNFTIAYNNKGQKYLIQLGNALS 922

Query: 496 -FGQYEEALRNLDKTIALNPN 515
              Q  +A+   +K I +NPN
Sbjct: 923 NLNQNNDAIDCFNKAININPN 943



 Score = 68.2 bits (165), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 89/406 (21%), Positives = 166/406 (40%), Gaps = 50/406 (12%)

Query: 153 FTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQRH 212
           + +A    D+A ++DPN   +Y+ +G       QY EA+   DK I  N N+ VA   + 
Sbjct: 443 YNEAIVCYDKAIQLDPNDEVNYFNKGNALNNLKQYNEAIVCYDKAIQFNKNYSVAHFSKG 502

Query: 213 FVVHKMIVPGDRERVEQSLKEFRNFVDTHSNVVEACTLFAQVLVDQEDFDGAEEYFNRSI 272
           + +H +      ++ ++++  + N +    N   A       L + + +  A   ++ +I
Sbjct: 503 YALHNL------KQYDEAIVCYNNAIKIDPNYTSAYFNKGTTLHNFKQYKEAIVCYSNAI 556

Query: 273 RVDPENASLYVHRAMLMLQARGNVDEAIKLIEKAISIDKSCMFAYETLGTIEVQRGRLEE 332
            +DP +AS+Y H+   +   +   +EAI   +KAI +D +   AY   G       +   
Sbjct: 557 ELDPSDASVYTHKGNALSDLK-QYNEAIVCYDKAIQLDPNDEVAYFKKGNALSDLKQYNI 615

Query: 333 AVKCFNKALPL-ARDEAELSHIYSLRDAAIAQMKVCER----YNIKKKVSPRSQNITKNE 387
           A+  ++KA+ L   DE      Y  + +A+  +K  +     Y+   +++P  Q    N+
Sbjct: 616 AIVFYDKAIQLDPNDEVA----YYKKGSALNDLKQYKEAIFCYDKAIQLNPNCQVAYFNK 671

Query: 388 KLAIKQLRENNDII--------IRPA-------------------------DKGGKTVVM 414
              ++ L++ N+ I        I P                          DKG K    
Sbjct: 672 GNTLQDLQQYNESIACYDKAIEIDPNQAEFYLQKGKVLHDLKNYKDALECYDKGIKLDSS 731

Query: 415 DKADYTQKMTSILNSNDYEIIPGDPTKTIEESEKYGNLENESGQK-HAASDFTKAFADLD 473
               Y  K  ++ N   Y          I+    Y    N  G+  H    + +A    D
Sbjct: 732 QTLIYNYKGRTLHNLKSYNEAIFYYNNAIKLDRNYAMAYNNKGRALHDLKQYNEAIISYD 791

Query: 474 EAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVA 519
           EA K DP++A ++  +G+      +Y ++L+  D  I ++ NF +A
Sbjct: 792 EAIKKDPSLAIAFNNKGRALHDLQKYNDSLQCYDTAIQIDQNFAIA 837



 Score = 61.6 bits (148), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 86/365 (23%), Positives = 152/365 (41%), Gaps = 48/365 (13%)

Query: 153 FTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQRH 212
           + +A    D+A ++DPN A  Y  +G       QY EA+   DK I L+PN  V    + 
Sbjct: 409 YNEAIVCYDKAIQLDPNDASFYNNKGNALSDLKQYNEAIVCYDKAIQLDPNDEVNYFNKG 468

Query: 213 FVVHKMIVPGDRERVEQSLKEFRNFVDTHSNVVEACTLFAQVLVDQEDFDGAEEYFNRSI 272
             ++ +      ++  +++  +   +  + N   A       L + + +D A   +N +I
Sbjct: 469 NALNNL------KQYNEAIVCYDKAIQFNKNYSVAHFSKGYALHNLKQYDEAIVCYNNAI 522

Query: 273 RVDPENASLYVHRAMLMLQARGNVDEAIKLIEKAISIDKSCMFAYETLGTIEVQRGRLEE 332
           ++DP   S Y ++    L       EAI     AI +D S    Y   G       +  E
Sbjct: 523 KIDPNYTSAYFNKGT-TLHNFKQYKEAIVCYSNAIELDPSDASVYTHKGNALSDLKQYNE 581

Query: 333 AVKCFNKALPL-ARDEAELSHIYSLRDAAIAQMKVCERYNIKKKVSPRSQNITKNEKLA- 390
           A+ C++KA+ L   DE      Y  +  A++ +K   +YNI      ++  +  N+++A 
Sbjct: 582 AIVCYDKAIQLDPNDEVA----YFKKGNALSDLK---QYNIAIVFYDKAIQLDPNDEVAY 634

Query: 391 IKQLRENNDIIIRPADKGGKTVVM--DKADYTQKMTSILNSNDYEIIPGDPTKTIEESEK 448
            K+    ND+      K  K  +   DKA                 I  +P   +    K
Sbjct: 635 YKKGSALNDL------KQYKEAIFCYDKA-----------------IQLNPNCQVAYFNK 671

Query: 449 YGNLENESGQKHAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDK 508
              L++          + ++ A  D+A ++DPN A+ Y Q+G++      Y++AL   DK
Sbjct: 672 GNTLQD-------LQQYNESIACYDKAIEIDPNQAEFYLQKGKVLHDLKNYKDALECYDK 724

Query: 509 TIALN 513
            I L+
Sbjct: 725 GIKLD 729



 Score = 49.3 bits (116), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 49/206 (23%), Positives = 93/206 (45%), Gaps = 14/206 (6%)

Query: 116 KAIEDLTQLVEDT-SVDPKIKVNAHIKRAVVH----LHAASDFTKAFADLDEAEKVDPNV 170
           +A+ DL Q  E   S D  IK +  +  A  +    LH    +  +    D A ++D N 
Sbjct: 775 RALHDLKQYNEAIISYDEAIKKDPSLAIAFNNKGRALHDLQKYNDSLQCYDTAIQIDQNF 834

Query: 171 ADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQRHFVVHKMIVPGDR-ERVEQ 229
           A +Y  +G+      QY +A+   DK I ++PNF +A   +   +H +    D     ++
Sbjct: 835 AIAYNNKGRALYNLKQYTDAIVCYDKAIQIDPNFTIAYNNKGKALHNLKQYKDAIACYDK 894

Query: 230 SLKEFRNFVDTHSNVVEACTL-FAQVLVDQEDFDGAEEYFNRSIRVDPENASLYVHRAML 288
           +++   NF   ++N  +   +     L +    + A + FN++I ++P + + Y  + + 
Sbjct: 895 AIQIDPNFTIAYNNKGQKYLIQLGNALSNLNQNNDAIDCFNKAININPNDTTNYFQKGLK 954

Query: 289 MLQARG-------NVDEAIKLIEKAI 307
            L  +G       N  +AI+  E+AI
Sbjct: 955 YLIVQGQFLTNIKNYTQAIENYEQAI 980



 Score = 40.0 bits (92), Expect = 2.8,   Method: Compositional matrix adjust.
 Identities = 64/270 (23%), Positives = 110/270 (40%), Gaps = 56/270 (20%)

Query: 283 VHRAMLMLQARGNVDEAIKLIEKAISIDKSCMFAYETLGTIEVQRGRLEEAVKCFNKALP 342
           ++R  + LQ      +AI+ I+ A+  +      Y   G    Q+G+ ++A+  F+KA+ 
Sbjct: 294 LNRKSVALQNLSEHLDAIQCIDVALQKNPEYSVGYFRKGYSLWQQGKNQDAIFIFDKAMQ 353

Query: 343 LARDEAELSHIYSLRDAAIAQMK------VCERYNIKKKVSPRSQNITKNEKLAIKQLRE 396
           +   +   +  Y+ +  A+  +K      VC  Y+   ++ P  +     +  A+  L++
Sbjct: 354 I---DPSYASTYNYKGNALNDLKQYNEAIVC--YDKAIQIYPNDEVAYFKKGNALSDLKQ 408

Query: 397 NNDIIIRPADKGGKTVVMDKADYTQKMTSILNSNDYEIIPGDPTKTIEESEKYGNLENES 456
            N+ I          V  DKA                 I  DP     ++  Y N  N  
Sbjct: 409 YNEAI----------VCYDKA-----------------IQLDPN----DASFYNNKGN-- 435

Query: 457 GQKHAASD---FTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALN 513
               A SD   + +A    D+A ++DPN   +Y+ +G       QY EA+   DK I  N
Sbjct: 436 ----ALSDLKQYNEAIVCYDKAIQLDPNDEVNYFNKGNALNNLKQYNEAIVCYDKAIQFN 491

Query: 514 PNFHVARAQRHFVWTSTLAELMAFSDEFMI 543
            N+ VA    HF     L  L  + DE ++
Sbjct: 492 KNYSVA----HFSKGYALHNLKQY-DEAIV 516


>gi|428320933|ref|YP_007118815.1| Tetratricopeptide TPR_2 repeat-containing protein [Oscillatoria
           nigro-viridis PCC 7112]
 gi|428244613|gb|AFZ10399.1| Tetratricopeptide TPR_2 repeat-containing protein [Oscillatoria
           nigro-viridis PCC 7112]
          Length = 471

 Score = 77.4 bits (189), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 98/411 (23%), Positives = 175/411 (42%), Gaps = 51/411 (12%)

Query: 138 AHIKRAVVHLHAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKT 197
           A+  R  V  +   D   A AD ++A ++ P++A++Y  RG      G  + A+ +L+K 
Sbjct: 45  AYYNRGNVRYNL-GDKKGAIADFNKAIELQPDLAEAYGNRGLFRSELGDKKGAIADLNKA 103

Query: 198 IALNPNFHVARAQRHFVVHKMIVPGDRERVEQSLKEFRNFVDTHSNVVEACTLFAQVLVD 257
           I L P+  +A   R  V  K+   GD+   + ++ ++   ++   +  +A      V  +
Sbjct: 104 IELQPDLALAYVNRGAVRSKL---GDK---KGAIADYNKAIELQPDYAQAYYNRGLVRSE 157

Query: 258 QEDFDGAEEYFNRSIRVDPENASLYVHRAMLMLQARGNVDEAIKLIEKAISIDKSCMFAY 317
             D  GA   +N++I + P+ A  Y +R ++  +  G+   AI    KAI +      AY
Sbjct: 158 LGDKKGAIADYNKAIELKPDLALAYYNRGLVRSEL-GDKKGAIADYNKAIELQPDYAQAY 216

Query: 318 ETLGTIEVQRGRLEEAVKCFNKALPLARDEAELSHIYSLRDAAIAQMK-VCERYNIKKKV 376
              GT+  + G  + A+   NK + L  D A+  +   L  + +   K     +N   ++
Sbjct: 217 GNRGTVRSELGDKKGAIADLNKVIELKPDLAQAYYNRGLFRSELGDKKGAIADFNKAIEL 276

Query: 377 SPRSQN----------ITKNEKLAIKQLRENNDIIIRPAD------KGG-KTVVMDK--- 416
            P              I  ++K AI     N  I ++P D      +G  + ++ DK   
Sbjct: 277 QPDDAQAYYKRGNVRYILGDKKGAITDF--NKAIELQPDDAFAYYNRGNVRYILGDKKGA 334

Query: 417 -ADYTQKMTSILNSNDYEIIPGDPTKTIEESEKYGNLENESGQKHAASDFTKAFADLDEA 475
            ADY + +         E+ P D           GN+ +E G K          AD ++ 
Sbjct: 335 IADYNKAI---------ELKPDDAQAYFNR----GNVRSELGDKKG------EIADYNKV 375

Query: 476 EKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQRHFV 526
            ++ P+ AD+Y  RG +    G  + A+ +L+K I L P++  A   R  V
Sbjct: 376 IELQPDYADAYINRGLVRYDLGDKKGAIADLNKAIELQPDYAFAYGNRGNV 426



 Score = 69.7 bits (169), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 90/394 (22%), Positives = 156/394 (39%), Gaps = 42/394 (10%)

Query: 151 SDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQ 210
            D   A AD + A ++ P+ A +YY RG +    G  + A+ + +K I L P+   A   
Sbjct: 23  GDKKGAIADYNRAIELQPDDALAYYNRGNVRYNLGDKKGAIADFNKAIELQPDLAEAYGN 82

Query: 211 RHFVVHKMIVPGDRERVEQSLKEFRNFVDTHSNVVEACTLFAQVLVDQEDFDGAEEYFNR 270
           R     ++   GD++    ++ +    ++   ++  A      V     D  GA   +N+
Sbjct: 83  RGLFRSEL---GDKK---GAIADLNKAIELQPDLALAYVNRGAVRSKLGDKKGAIADYNK 136

Query: 271 SIRVDPENASLYVHRAMLMLQARGNVDEAIKLIEKAISIDKSCMFAYETLGTIEVQRGRL 330
           +I + P+ A  Y +R ++  +  G+   AI    KAI +      AY   G +  + G  
Sbjct: 137 AIELQPDYAQAYYNRGLVRSEL-GDKKGAIADYNKAIELKPDLALAYYNRGLVRSELGDK 195

Query: 331 EEAVKCFNKALPLARDEAE-------LSHIYSLRDAAIAQM-KVCERYNIKKKVSPRSQN 382
           + A+  +NKA+ L  D A+       +      +  AIA + KV E       + P    
Sbjct: 196 KGAIADYNKAIELQPDYAQAYGNRGTVRSELGDKKGAIADLNKVIE-------LKPDLAQ 248

Query: 383 ITKNEKLAIKQLRENNDIIIRPADKGGKTVVMDKADYTQ--KMTSILNSNDYEIIPGDPT 440
              N  L   +L           DK G     +KA   Q     +     +   I GD  
Sbjct: 249 AYYNRGLFRSEL----------GDKKGAIADFNKAIELQPDDAQAYYKRGNVRYILGDKK 298

Query: 441 KTIEESEKYGNLE--------NESGQKHAASDFTKAFADLDEAEKVDPNVADSYYQRGQI 492
             I +  K   L+        N    ++   D   A AD ++A ++ P+ A +Y+ RG +
Sbjct: 299 GAITDFNKAIELQPDDAFAYYNRGNVRYILGDKKGAIADYNKAIELKPDDAQAYFNRGNV 358

Query: 493 YCLFGQYEEALRNLDKTIALNPNFHVARAQRHFV 526
               G  +  + + +K I L P++  A   R  V
Sbjct: 359 RSELGDKKGEIADYNKVIELQPDYADAYINRGLV 392



 Score = 67.0 bits (162), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 58/248 (23%), Positives = 112/248 (45%), Gaps = 12/248 (4%)

Query: 104 RATVYIFTSQSTKAIEDLTQLVEDTSVDPKIKVNAHIKRAVVHLHAASDFTKAFADLDEA 163
           R TV         AI DL +++E   + P +   A+  R +       D   A AD ++A
Sbjct: 219 RGTVRSELGDKKGAIADLNKVIE---LKPDL-AQAYYNRGLFRSEL-GDKKGAIADFNKA 273

Query: 164 EKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQRHFVVHKMIVPGD 223
            ++ P+ A +YY+RG +  + G  + A+ + +K I L P+   A   R  V +   + GD
Sbjct: 274 IELQPDDAQAYYKRGNVRYILGDKKGAITDFNKAIELQPDDAFAYYNRGNVRY---ILGD 330

Query: 224 RERVEQSLKEFRNFVDTHSNVVEACTLFAQVLVDQEDFDGAEEYFNRSIRVDPENASLYV 283
           +   + ++ ++   ++   +  +A      V  +  D  G    +N+ I + P+ A  Y+
Sbjct: 331 K---KGAIADYNKAIELKPDDAQAYFNRGNVRSELGDKKGEIADYNKVIELQPDYADAYI 387

Query: 284 HRAMLMLQARGNVDEAIKLIEKAISIDKSCMFAYETLGTIEVQRGRLEEAVKCFNKALPL 343
           +R ++     G+   AI  + KAI +     FAY   G +    G  + A++   KA  L
Sbjct: 388 NRGLVRYDL-GDKKGAIADLNKAIELQPDYAFAYGNRGNVRYNLGDKKGAIEDLQKAAQL 446

Query: 344 ARDEAELS 351
            + + +++
Sbjct: 447 FKAQGQMA 454


>gi|428226918|ref|YP_007111015.1| hypothetical protein GEI7407_3496 [Geitlerinema sp. PCC 7407]
 gi|427986819|gb|AFY67963.1| Tetratricopeptide TPR_1 repeat-containing protein [Geitlerinema sp.
           PCC 7407]
          Length = 466

 Score = 77.0 bits (188), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 82/386 (21%), Positives = 161/386 (41%), Gaps = 52/386 (13%)

Query: 147 LHAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHV 206
           L  A  + +A A  D+A ++ P  A+ + +RG       + +EA+ N D+ IAL P+   
Sbjct: 43  LFEAGRYEEAIARYDKALEIQPTSAEIWGRRGASLGQLRRDDEAIANFDRAIALQPDLAT 102

Query: 207 ARAQRHFVVHKMIVPGDRERVEQSLKEFRNFVDTHSNVVEACTLFAQVLVDQEDFDGAEE 266
           A   R  V+ +      + + +++LK F   ++ H    EA T  + +L     ++    
Sbjct: 103 AWYGRGLVLER------QGQDDEALKSFETALEHHPEYYEAWTFRSYMLQKLGRYEEVVA 156

Query: 267 YFNRSIRVDPENASLY--VHRAMLMLQARGNVDEAIKLIEKAISIDKSCMFAYETLGTIE 324
            +  ++++ P +   +  + +A++ L  R   +EAI  ++ A+++      A+   G   
Sbjct: 157 GYETALKLQPGDYKTWYNLGKALVHLDRR---EEAIASLDTALALHPRHYRAWYNRGATL 213

Query: 325 VQRGRLEEAVKCFNKALPLARDEAELSHIYSLRDAAIAQM----KVCERYNIKKKVSPRS 380
           V+ GR EEA+  F++A+ L  D     + +  R  A  Q+    +    +     V+P+ 
Sbjct: 214 VELGRPEEAIASFDRAIALKPD---CDYAWKHRGLAWEQLGNYAEAVTSFERALAVAPKD 270

Query: 381 QNITKNEKLAIKQLRENNDIIIRPADKGGKTVVMDKADYTQKMTSILNSNDYEIIPGDPT 440
            +  K+   A++++    + I            +D+    Q              P DP 
Sbjct: 271 CDAWKHYSYALQRVGRYEEAI----------ASLDQVVSLQ--------------PDDPR 306

Query: 441 KTIEESEKYGNLENESGQKHAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYE 500
              +     G L            + +A    D A  ++P+   S+Y RG      G  E
Sbjct: 307 NWYQRGVSLGKLNR----------YEEAVDSYDRAIALNPHDPKSWYNRGVALEHMGCPE 356

Query: 501 EALRNLDKTIALNPNFHVARAQRHFV 526
            AL N+++++ L+P  H A   R  +
Sbjct: 357 AALMNINRSLELHPRNHYAWLVRGLL 382



 Score = 59.3 bits (142), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 76/349 (21%), Positives = 132/349 (37%), Gaps = 48/349 (13%)

Query: 171 ADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQRHFVVHKMIVPGDRERVEQS 230
           + ++Y  G      G+YEEA+   DK + + P       +R   +      G   R +++
Sbjct: 33  SQAWYGLGNALFEAGRYEEAIARYDKALEIQPTSAEIWGRRGASL------GQLRRDDEA 86

Query: 231 LKEFRNFVDTHSNVVEACTLFAQVLVDQEDFDGAEEYFNRSIRVDPENASLYVHRAMLML 290
           +  F   +    ++  A      VL  Q   D A + F  ++   PE    +  R+  ML
Sbjct: 87  IANFDRAIALQPDLATAWYGRGLVLERQGQDDEALKSFETALEHHPEYYEAWTFRSY-ML 145

Query: 291 QARGNVDEAIKLIEKAISIDKSCMFAYETLGTIEVQRGRLEEAVKCFNKALPLARDEAEL 350
           Q  G  +E +   E A+ +       +  LG   V   R EEA+   + AL L       
Sbjct: 146 QKLGRYEEVVAGYETALKLQPGDYKTWYNLGKALVHLDRREEAIASLDTALAL---HPRH 202

Query: 351 SHIYSLRDAAIAQMKVCER----YNIKKKVSPRSQNITKNEKLAIKQLRENNDIIIRPAD 406
              +  R A + ++   E     ++    + P      K+  LA +QL            
Sbjct: 203 YRAWYNRGATLVELGRPEEAIASFDRAIALKPDCDYAWKHRGLAWEQL------------ 250

Query: 407 KGGKTVVMDKADYTQKMTSILNSNDYEIIPGDPTKTIEESEKYGNLENESGQKHAASDFT 466
                      +Y + +TS      +E       K  +  + Y       G+      + 
Sbjct: 251 ----------GNYAEAVTS------FERALAVAPKDCDAWKHYSYALQRVGR------YE 288

Query: 467 KAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPN 515
           +A A LD+   + P+   ++YQRG       +YEEA+ + D+ IALNP+
Sbjct: 289 EAIASLDQVVSLQPDDPRNWYQRGVSLGKLNRYEEAVDSYDRAIALNPH 337



 Score = 52.0 bits (123), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 41/176 (23%), Positives = 75/176 (42%), Gaps = 7/176 (3%)

Query: 147 LHAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHV 206
           L     + +A A LD+   + P+   ++YQRG       +YEEA+ + D+ IALNP+   
Sbjct: 281 LQRVGRYEEAIASLDQVVSLQPDDPRNWYQRGVSLGKLNRYEEAVDSYDRAIALNPHDPK 340

Query: 207 ARAQRHFVVHKMIVPGDRERVEQSLKEFRNFVDTHSNVVEACTLFAQVLVDQEDFDGAEE 266
           +   R   +  M  P      E +L      ++ H     A  +   +L      + A  
Sbjct: 341 SWYNRGVALEHMGCP------EAALMNINRSLELHPRNHYAWLVRGLLLWQLRQPEEAMA 394

Query: 267 YFNRSIRVDPENASLYVHRAMLMLQARGNVDEAIKLIEKAISIDKSCMFAYETLGT 322
             + S+R+ P N S +  +A   + A+  + +    ++KAI ++     A   + T
Sbjct: 395 SLDESLRLQPNNPSAWYSKAAWCI-AQKQLGQTFLYLQKAIMLNPGIYRAMAKMDT 449



 Score = 48.9 bits (115), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 50/221 (22%), Positives = 89/221 (40%), Gaps = 17/221 (7%)

Query: 316 AYETLGTIEVQRGRLEEAVKCFNKALPLARDEAELSHIYSLRDAAIAQMK----VCERYN 371
           A+  LG    + GR EEA+  ++KAL +    AE   I+  R A++ Q++        ++
Sbjct: 35  AWYGLGNALFEAGRYEEAIARYDKALEIQPTSAE---IWGRRGASLGQLRRDDEAIANFD 91

Query: 372 IKKKVSPRSQNITKNEKLAIKQLRENNDIIIRPADKGGKTVVMDKADYTQKMT----SIL 427
               + P          L +++  ++++ +     K  +T +    +Y +  T     + 
Sbjct: 92  RAIALQPDLATAWYGRGLVLERQGQDDEAL-----KSFETALEHHPEYYEAWTFRSYMLQ 146

Query: 428 NSNDYE-IIPGDPTKTIEESEKYGNLENESGQKHAASDFTKAFADLDEAEKVDPNVADSY 486
               YE ++ G  T    +   Y    N            +A A LD A  + P    ++
Sbjct: 147 KLGRYEEVVAGYETALKLQPGDYKTWYNLGKALVHLDRREEAIASLDTALALHPRHYRAW 206

Query: 487 YQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQRHFVW 527
           Y RG      G+ EEA+ + D+ IAL P+   A   R   W
Sbjct: 207 YNRGATLVELGRPEEAIASFDRAIALKPDCDYAWKHRGLAW 247


>gi|297200375|ref|ZP_06917772.1| conserved hypothetical protein [Streptomyces sviceus ATCC 29083]
 gi|197709493|gb|EDY53527.1| conserved hypothetical protein [Streptomyces sviceus ATCC 29083]
          Length = 1082

 Score = 77.0 bits (188), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 103/436 (23%), Positives = 180/436 (41%), Gaps = 47/436 (10%)

Query: 114 STKAIEDLTQLVEDTSVDPKIKVNAHIKRAVVHLHAASDFTKAFADLDEAEKVDPNVADS 173
            T A  DL  L+    +DP  +  AH+ R    L    ++ +A  + D A ++DP    +
Sbjct: 508 GTTAAADL--LLARPGLDPAGRAEAHVLRGR-ELRRRQEYGQALEEYDRAVELDPLQPLA 564

Query: 174 YYQRGQIYCLFGQYEEALRNLDKTIALNPN--FHVA-RAQRHFVVHKMIVPGDRERVEQS 230
           +Y RG  + L   Y  AL  LD+ + L P+  + +A RA+ H +   +         EQ+
Sbjct: 565 HYGRGLTHQLLEDYPAALTALDRAVELAPDNGWIIAERAETHRLASHL---------EQA 615

Query: 231 LKEFRNFV--DTHSNVVEACTLFAQVLVDQEDFDGAEEYFNRSIRVDPENASLYVHRAML 288
           + ++   V  D   +V  A     +  +   D   A+  FNR++ +DPE     V RA L
Sbjct: 616 VVDYTRAVALDPTDDVALAGRAVCRHGLGMLDESLAD--FNRALSIDPEYLWALVRRARL 673

Query: 289 MLQARGNVDEAIKLIEKAISIDKSCMFAYETLGTIEVQRGRLEEAVKCFNKALPL----- 343
             +ARG+VD+A   +++A  +     +     G      GR EEAV    +A+ L     
Sbjct: 674 H-RARGDVDKAFADLDRAYELAPDLAWIASERGDAYRIAGRYEEAVTELGRAVSLEPGYA 732

Query: 344 ----ARDEA--ELSHIYSLRDAAIAQMKVCERYNIKKKVSPRSQNITKNEKLAIKQLREN 397
               +R +A  EL        A    +++   Y     +  R++    +E+ A+  LR  
Sbjct: 733 SALASRGQALYELGRYDEASAAFDGAVRLIPDYAWALVMRSRARRRLDDEEGALADLRRA 792

Query: 398 NDIIIRPADKGGKTVVMDKADYTQKMTSILNSND--YEIIPGDPTKTIEESEKYGNLENE 455
            +     A+ G   +  +     Q       +    + ++  DP   I        L   
Sbjct: 793 VE-----AEPGVDWIECELGLAQQGAHRFAEAEASFHRVLSRDPDYKI-------ALAGL 840

Query: 456 SGQKHAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPN 515
           +      + + +A   LD A   DP  A +Y +R ++    G+  +AL +LD+ + L+P 
Sbjct: 841 AAIVQTRNSYEEALHYLDRAVTADPEFAWAYGERARVCLAIGRTAQALADLDRCVELDPG 900

Query: 516 FHVARAQ--RHFVWTS 529
               RA+  R  +W  
Sbjct: 901 TTRERAEAVRLLLWCG 916


>gi|153008723|ref|YP_001369938.1| hypothetical protein Oant_1392 [Ochrobactrum anthropi ATCC 49188]
 gi|151560611|gb|ABS14109.1| TPR repeat-containing protein [Ochrobactrum anthropi ATCC 49188]
          Length = 301

 Score = 77.0 bits (188), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 62/212 (29%), Positives = 98/212 (46%), Gaps = 20/212 (9%)

Query: 151 SDFTKAFADLDEAEKVDPNVA-------------DSYYQRGQIYCLFGQYEEALRNLDKT 197
           S  T A + +D+A+    N++             + Y  RG  Y   G+Y+EALR+ D+ 
Sbjct: 53  SSTTTALSTVDKAQGSSENISSLTSVIQSNPRDPEGYNVRGSAYGKSGRYKEALRDFDQA 112

Query: 198 IALNPNFHVARAQRHFVVHKMIVPGDRERVEQSLKEFRNFVDTHSNVVEACTLFAQVLVD 257
           IALNPNF+ A A R  V   M   GD  +   +++++   +  +S    A      V   
Sbjct: 113 IALNPNFYQAYANRALVYRYM---GDSTK---AVQDYSKAIQLNSQYDAAYIGRGNVYRQ 166

Query: 258 QEDFDGAEEYFNRSIRVDPENASLYVHRAMLMLQARGNVDEAIKLIEKAISIDKSCMFAY 317
               D A   FN++I +   +   Y +R  L+ QA+G   +AI+   KAIS++ +    Y
Sbjct: 167 AGRLDQALSDFNQAIALQTTDGRAYHNRG-LIYQAKGQHKQAIEDFSKAISLNSTAPEPY 225

Query: 318 ETLGTIEVQRGRLEEAVKCFNKALPLARDEAE 349
              G   V  G  + A   FN A+ L ++ AE
Sbjct: 226 NGRGISYVALGDYDNAFDDFNTAITLDQNIAE 257



 Score = 55.1 bits (131), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 44/178 (24%), Positives = 84/178 (47%), Gaps = 19/178 (10%)

Query: 104 RATVYIFTSQSTKAIEDLTQLVE-DTSVDPKIKVNAHIKRAVVHLHAASDFTKAFADLDE 162
           RA VY +   STKA++D ++ ++ ++  D      A+I R  V+  A     +A +D ++
Sbjct: 126 RALVYRYMGDSTKAVQDYSKAIQLNSQYDA-----AYIGRGNVYRQAGR-LDQALSDFNQ 179

Query: 163 AEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALN---PNFHVARAQRHFVVHKMI 219
           A  +      +Y+ RG IY   GQ+++A+ +  K I+LN   P  +  R   +  +    
Sbjct: 180 AIALQTTDGRAYHNRGLIYQAKGQHKQAIEDFSKAISLNSTAPEPYNGRGISYVAL---- 235

Query: 220 VPGDRERVEQSLKEFRNFVDTHSNVVEACTLFAQVLVDQEDFDGAEEYFNRSIRVDPE 277
             GD    + +  +F   +    N+ E+    A V     D   A   ++R++++DP+
Sbjct: 236 --GD---YDNAFDDFNTAITLDQNIAESWANQALVYEHNGDKAKAANSYSRAVQLDPK 288



 Score = 52.4 bits (124), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 47/208 (22%), Positives = 97/208 (46%), Gaps = 12/208 (5%)

Query: 103 LRATVYIFTSQSTKAIEDLTQLVEDTSVDPKIKVNAHIKRAVVHLHAASDFTKAFADLDE 162
           +R + Y  + +  +A+ D  Q +   +++P     A+  RA+V+ +   D TKA  D  +
Sbjct: 91  VRGSAYGKSGRYKEALRDFDQAI---ALNPNF-YQAYANRALVYRYMG-DSTKAVQDYSK 145

Query: 163 AEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQRHFVVHKMIVPG 222
           A +++     +Y  RG +Y   G+ ++AL + ++ IAL      A   R  +        
Sbjct: 146 AIQLNSQYDAAYIGRGNVYRQAGRLDQALSDFNQAIALQTTDGRAYHNRGLIYQA----- 200

Query: 223 DRERVEQSLKEFRNFVDTHSNVVEACTLFAQVLVDQEDFDGAEEYFNRSIRVDPENASLY 282
            + + +Q++++F   +  +S   E         V   D+D A + FN +I +D   A  +
Sbjct: 201 -KGQHKQAIEDFSKAISLNSTAPEPYNGRGISYVALGDYDNAFDDFNTAITLDQNIAESW 259

Query: 283 VHRAMLMLQARGNVDEAIKLIEKAISID 310
            ++A L+ +  G+  +A     +A+ +D
Sbjct: 260 ANQA-LVYEHNGDKAKAANSYSRAVQLD 286



 Score = 50.8 bits (120), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 28/78 (35%), Positives = 41/78 (52%), Gaps = 13/78 (16%)

Query: 463 SDFTKAFADLDEAEKVDPNVA-------------DSYYQRGQIYCLFGQYEEALRNLDKT 509
           S  T A + +D+A+    N++             + Y  RG  Y   G+Y+EALR+ D+ 
Sbjct: 53  SSTTTALSTVDKAQGSSENISSLTSVIQSNPRDPEGYNVRGSAYGKSGRYKEALRDFDQA 112

Query: 510 IALNPNFHVARAQRHFVW 527
           IALNPNF+ A A R  V+
Sbjct: 113 IALNPNFYQAYANRALVY 130



 Score = 42.7 bits (99), Expect = 0.53,   Method: Compositional matrix adjust.
 Identities = 26/105 (24%), Positives = 51/105 (48%), Gaps = 5/105 (4%)

Query: 104 RATVYIFTSQSTKAIEDLTQLVEDTSVDPKIKVNAHIKRAVVHLHAASDFTKAFADLDEA 163
           R  +Y    Q  +AIED ++ +   S  P+     +  R + ++ A  D+  AF D + A
Sbjct: 194 RGLIYQAKGQHKQAIEDFSKAISLNSTAPE----PYNGRGISYV-ALGDYDNAFDDFNTA 248

Query: 164 EKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVAR 208
             +D N+A+S+  +  +Y   G   +A  +  + + L+P +  A+
Sbjct: 249 ITLDQNIAESWANQALVYEHNGDKAKAANSYSRAVQLDPKYQPAK 293



 Score = 42.4 bits (98), Expect = 0.57,   Method: Compositional matrix adjust.
 Identities = 29/98 (29%), Positives = 50/98 (51%), Gaps = 1/98 (1%)

Query: 268 FNRSIRVDPENASLYVHRAMLMLQARGNVDEAIKLIEKAISIDKSCMFAYETLGTIEVQR 327
           F+++I ++P     Y +RA L+ +  G+  +A++   KAI ++     AY   G +  Q 
Sbjct: 109 FDQAIALNPNFYQAYANRA-LVYRYMGDSTKAVQDYSKAIQLNSQYDAAYIGRGNVYRQA 167

Query: 328 GRLEEAVKCFNKALPLARDEAELSHIYSLRDAAIAQMK 365
           GRL++A+  FN+A+ L   +    H   L   A  Q K
Sbjct: 168 GRLDQALSDFNQAIALQTTDGRAYHNRGLIYQAKGQHK 205



 Score = 39.7 bits (91), Expect = 4.5,   Method: Compositional matrix adjust.
 Identities = 32/117 (27%), Positives = 50/117 (42%), Gaps = 15/117 (12%)

Query: 423 MTSILNSNDYEIIPGDPTKTIEESEKYGNLENESGQKHAASDFTKAFADLDEAEKVDPNV 482
           +TS++ SN     P DP         YG    +SG+      + +A  D D+A  ++PN 
Sbjct: 75  LTSVIQSN-----PRDPEGYNVRGSAYG----KSGR------YKEALRDFDQAIALNPNF 119

Query: 483 ADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQRHFVWTSTLAELMAFSD 539
             +Y  R  +Y   G   +A+++  K I LN  +  A   R  V+        A SD
Sbjct: 120 YQAYANRALVYRYMGDSTKAVQDYSKAIQLNSQYDAAYIGRGNVYRQAGRLDQALSD 176


>gi|427715575|ref|YP_007063569.1| hypothetical protein Cal7507_0234 [Calothrix sp. PCC 7507]
 gi|427348011|gb|AFY30735.1| Tetratricopeptide TPR_1 repeat-containing protein [Calothrix sp.
           PCC 7507]
          Length = 607

 Score = 77.0 bits (188), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 102/457 (22%), Positives = 180/457 (39%), Gaps = 88/457 (19%)

Query: 110 FTSQSTKAIEDLTQLVEDTSVDPKIKVNAHIKRAVVHLHAASDFTKAFADLDEAEKVDPN 169
           F  +  +AI   TQ +E   +DP     A+  RA++      D+  A AD + A +++PN
Sbjct: 15  FQGEFEEAIAYYTQAIE---LDPDY-AEAYHNRAIILSSGIKDYHGAIADYNRALQINPN 70

Query: 170 VADSYYQRGQIYCLFGQYEEALRNLDKTIALNP----NFHV-ARAQRHFVVHKMIVPGDR 224
            A++Y  R         Y+ A+ + ++ + +NP    ++H   +A +    ++  +   R
Sbjct: 71  FAEAYSNRANARYFLEDYQGAIADYNRALQINPHLSESYHGRGKASKALGDYETAIADYR 130

Query: 225 E--RVEQSLKEFRNFVDT----HSNVVEACTLFAQVLVDQEDFDGAEEYFNRSIRVDPEN 278
           +  ++   L  + N +D     H+  V  C        DQ D  GA   FN+++++ P  
Sbjct: 131 QALQINPQLTSYIN-IDIANAYHNQGVSRC--------DQGDNQGAIADFNQALQLHPHF 181

Query: 279 ASLYVHR--AMLMLQARGNVDEAIKLIEKAISIDKSCMFAYETLGTIEVQRGRLEEAVKC 336
           A+ Y +R  A  +L   G+  +AI    +A+ ++     AY  LG      G  + A+  
Sbjct: 182 AAAYSNRGNAYHLL---GDYHQAIADQNQALKLEPKLAEAYHNLGNAYYSLGDYQSAIAN 238

Query: 337 FNKALPLARDEAELSHIYSLRDAAIAQMK----------------------VCER----- 369
           +N+AL +   + E +  Y  R    A +K                       CER     
Sbjct: 239 YNRALEI---KPEFAGAYYNRGLVFAHIKEYDQALADFSEAVKLNPDDVQAYCERGLVHS 295

Query: 370 --YNIKKKVSPRSQNITKNEKLA-IKQLRENNDIIIRPADKGGKTVVMDKADYTQKMTSI 426
              N +  ++   Q + KN  L  +   R N            K  + D     +  T +
Sbjct: 296 SLGNYQGAIADYDQALQKNPTLGLVYGFRAN-----------AKRRLADYQGAIEDSTRL 344

Query: 427 LNSNDYEIIPGDPTKTIEESEKYGNLENESGQKHAASDFTKAFADLDEAEKVDPNVADSY 486
           L  N   +  G   + +               + +  D+  A  D D A   D N+A +Y
Sbjct: 345 LRLNPL-LAEGYCDRAVA--------------RRSLGDYQGAIKDYDRALLFDANLAAAY 389

Query: 487 YQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQR 523
           Y RG +Y     Y+ A+ +  + I + PNF  A   R
Sbjct: 390 YGRGIVYEAMQDYQRAIADNTQAIKIEPNFSPAYCNR 426



 Score = 75.9 bits (185), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 94/415 (22%), Positives = 174/415 (41%), Gaps = 49/415 (11%)

Query: 104 RATVYIFTSQSTKAIEDLTQLVEDTSVDPKIKVNAH-IKRAVVHLHAASDFTKAFADLDE 162
           R   Y       +AI D  Q ++   ++PK+    H +  A   L    D+  A A+ + 
Sbjct: 188 RGNAYHLLGDYHQAIADQNQALK---LEPKLAEAYHNLGNAYYSL---GDYQSAIANYNR 241

Query: 163 AEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQRHFVVHKMIVPG 222
           A ++ P  A +YY RG ++    +Y++AL +  + + LNP+   A  +R  +VH  +   
Sbjct: 242 ALEIKPEFAGAYYNRGLVFAHIKEYDQALADFSEAVKLNPDDVQAYCERG-LVHSSL--- 297

Query: 223 DRERVEQSLKEFRNFVDTHSNVVEACTLFAQVLVDQEDFDGAEEYFNRSIRVDPENASLY 282
                + ++ ++   +  +  +       A       D+ GA E   R +R++P  A  Y
Sbjct: 298 --GNYQGAIADYDQALQKNPTLGLVYGFRANAKRRLADYQGAIEDSTRLLRLNPLLAEGY 355

Query: 283 VHRAMLMLQARGNVDEAIKLIEKAISIDKSCMFAYETLGTIEVQRGRLEEAVKCFNKALP 342
             RA+   ++ G+   AIK  ++A+  D +   AY         RG + EA++ + +A+ 
Sbjct: 356 CDRAVAR-RSLGDYQGAIKDYDRALLFDANLAAAY-------YGRGIVYEAMQDYQRAIA 407

Query: 343 LARDEAELSHIYSLRDAAIAQMKVCERYNIKKKVSPRSQNITKNEKLAIKQLRENNDIII 402
                 ++   +S           C R N ++        +  +E+ AI     N  + I
Sbjct: 408 DNTQAIKIEPNFS--------PAYCNRGNARR--------LLGDEQGAIADY--NQALQI 449

Query: 403 RPADKGGKTVVMDKADYTQKMTSILNSNDYEIIPGDPTKTIEESEKYGNLENESGQKH-A 461
            P D G          Y  K        DY     D T+ +  +       ++ G  H A
Sbjct: 450 NP-DFGEAYYNRASIRYALK--------DYRGAIADYTQALRLNPHSAAFYSDRGNAHYA 500

Query: 462 ASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNF 516
             D+  A AD ++A  ++P+ AD ++ RG+   L G  + AL +L + + L P++
Sbjct: 501 LEDYQGAIADYNQAIALEPSFADDWFNRGRSRSLLGDLQGALVDLKQALELQPHW 555



 Score = 70.5 bits (171), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 87/439 (19%), Positives = 177/439 (40%), Gaps = 32/439 (7%)

Query: 104 RATVYIFTSQSTKAIEDLTQLVEDTSVDPKIKVNAHIKRAVVHLHAASDFTKAFADLDEA 163
           RA    F      AI D  + ++   ++P +  + H +       A  D+  A AD  +A
Sbjct: 78  RANARYFLEDYQGAIADYNRALQ---INPHLSESYHGRGKASK--ALGDYETAIADYRQA 132

Query: 164 EKVDP--------NVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQRHFVV 215
            +++P        ++A++Y+ +G   C  G  + A+ + ++ + L+P+F  A + R    
Sbjct: 133 LQINPQLTSYINIDIANAYHNQGVSRCDQGDNQGAIADFNQALQLHPHFAAAYSNRGNAY 192

Query: 216 HKMIVPGDRERVEQSLKEFRNFVDTHSNVVEACTLFAQVLVDQEDFDGAEEYFNRSIRVD 275
           H +   GD     Q++ +    +     + EA            D+  A   +NR++ + 
Sbjct: 193 HLL---GD---YHQAIADQNQALKLEPKLAEAYHNLGNAYYSLGDYQSAIANYNRALEIK 246

Query: 276 PENASLYVHRAMLMLQARGNVDEAIKLIEKAISIDKSCMFAYETLGTIEVQRGRLEEAVK 335
           PE A  Y +R ++    +   D+A+    +A+ ++   + AY   G +    G  + A+ 
Sbjct: 247 PEFAGAYYNRGLVFAHIK-EYDQALADFSEAVKLNPDDVQAYCERGLVHSSLGNYQGAIA 305

Query: 336 CFNKALPLARDEAELSHIYSLRDAAIAQM----KVCERYNIKKKVSPRSQNITKNEKLAI 391
            +++AL   +    L  +Y  R  A  ++       E      +++P       +  +A 
Sbjct: 306 DYDQAL---QKNPTLGLVYGFRANAKRRLADYQGAIEDSTRLLRLNPLLAEGYCDRAVAR 362

Query: 392 KQLRENNDIIIRPADKGGKTVVMDKADYTQKMTSILNSNDYEIIPGDPTKTIEESEKYGN 451
           + L +    I +  D+         A Y  +        DY+    D T+ I+    +  
Sbjct: 363 RSLGDYQGAI-KDYDRALLFDANLAAAYYGRGIVYEAMQDYQRAIADNTQAIKIEPNFSP 421

Query: 452 LE-NESGQKHAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTI 510
              N    +    D   A AD ++A +++P+  ++YY R  I      Y  A+ +  + +
Sbjct: 422 AYCNRGNARRLLGDEQGAIADYNQALQINPDFGEAYYNRASIRYALKDYRGAIADYTQAL 481

Query: 511 ALNPN---FHVARAQRHFV 526
            LNP+   F+  R   H+ 
Sbjct: 482 RLNPHSAAFYSDRGNAHYA 500



 Score = 59.3 bits (142), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 64/278 (23%), Positives = 120/278 (43%), Gaps = 29/278 (10%)

Query: 88  IESTSSNHTKALARLLRAT--------VYIFTSQSTKAIEDLTQLVEDTS----VDPKIK 135
           + S+  N+  A+A   +A         VY F + + + + D    +ED++    ++P + 
Sbjct: 293 VHSSLGNYQGAIADYDQALQKNPTLGLVYGFRANAKRRLADYQGAIEDSTRLLRLNPLL- 351

Query: 136 VNAHIKRAVVHLHAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLD 195
              +  RAV    +  D+  A  D D A   D N+A +YY RG +Y     Y+ A+ +  
Sbjct: 352 AEGYCDRAVAR-RSLGDYQGAIKDYDRALLFDANLAAAYYGRGIVYEAMQDYQRAIADNT 410

Query: 196 KTIALNPNFHVARAQRHFVVHKMIVPGDRERV----EQSLKEFRNFVDTHSNVVEACTLF 251
           + I + PNF  A   R          G+  R+    + ++ ++   +  + +  EA    
Sbjct: 411 QAIKIEPNFSPAYCNR----------GNARRLLGDEQGAIADYNQALQINPDFGEAYYNR 460

Query: 252 AQVLVDQEDFDGAEEYFNRSIRVDPENASLYVHRAMLMLQARGNVDEAIKLIEKAISIDK 311
           A +    +D+ GA   + +++R++P +A+ Y  R      A  +   AI    +AI+++ 
Sbjct: 461 ASIRYALKDYRGAIADYTQALRLNPHSAAFYSDRGNAHY-ALEDYQGAIADYNQAIALEP 519

Query: 312 SCMFAYETLGTIEVQRGRLEEAVKCFNKALPLARDEAE 349
           S    +   G      G L+ A+    +AL L    AE
Sbjct: 520 SFADDWFNRGRSRSLLGDLQGALVDLKQALELQPHWAE 557



 Score = 58.2 bits (139), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 71/309 (22%), Positives = 131/309 (42%), Gaps = 37/309 (11%)

Query: 245 VEACTLFAQVLVD--QEDFDGAEEYFNRSIRVDPENASLYVHRAMLMLQARGNVDEAIKL 302
           ++A  LF Q L    Q +F+ A  Y+ ++I +DP+ A  Y +RA+++     +   AI  
Sbjct: 1   MKAEDLFNQGLNKNFQGEFEEAIAYYTQAIELDPDYAEAYHNRAIILSSGIKDYHGAIAD 60

Query: 303 IEKAISIDKSCMFAYETLGTIEVQRGRLEEAVKCFNKALPLARDEAELSHIYSLRDAAIA 362
             +A+ I+ +   AY             + A+  +N+AL +      LS  Y  R  A  
Sbjct: 61  YNRALQINPNFAEAYSNRANARYFLEDYQGAIADYNRALQI---NPHLSESYHGRGKASK 117

Query: 363 QMKVCER----YNIKKKVSPRSQNITKNEKLAIKQLRENNDIIIRPADKGGKTVVMDKAD 418
            +   E     Y    +++P+   +T    + I     N  +     D+G     +  AD
Sbjct: 118 ALGDYETAIADYRQALQINPQ---LTSYINIDIANAYHNQGV--SRCDQGDNQGAI--AD 170

Query: 419 YTQKM-------TSILNSNDYEIIPGDPTKTIEE-----------SEKYGNLENESGQKH 460
           + Q +        +  N  +   + GD  + I +           +E Y NL N     +
Sbjct: 171 FNQALQLHPHFAAAYSNRGNAYHLLGDYHQAIADQNQALKLEPKLAEAYHNLGNA---YY 227

Query: 461 AASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVAR 520
           +  D+  A A+ + A ++ P  A +YY RG ++    +Y++AL +  + + LNP+   A 
Sbjct: 228 SLGDYQSAIANYNRALEIKPEFAGAYYNRGLVFAHIKEYDQALADFSEAVKLNPDDVQAY 287

Query: 521 AQRHFVWTS 529
            +R  V +S
Sbjct: 288 CERGLVHSS 296



 Score = 51.6 bits (122), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 55/258 (21%), Positives = 111/258 (43%), Gaps = 30/258 (11%)

Query: 101 RLLR-----ATVYIFTSQSTKAIEDLTQLVEDTSVDPKIKVN---AHIKRAVVHLHAASD 152
           RLLR     A  Y   + + +++ D    ++D         N   A+  R +V+  A  D
Sbjct: 343 RLLRLNPLLAEGYCDRAVARRSLGDYQGAIKDYDRALLFDANLAAAYYGRGIVY-EAMQD 401

Query: 153 FTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQRH 212
           + +A AD  +A K++PN + +Y  RG    L G  + A+ + ++ + +NP+F  A     
Sbjct: 402 YQRAIADNTQAIKIEPNFSPAYCNRGNARRLLGDEQGAIADYNQALQINPDFGEAYY--- 458

Query: 213 FVVHKMIVPGDRERVEQSLKEFRNFVDTHSNVVEACTLFAQVLVDQ-------EDFDGAE 265
                     +R  +  +LK++R  +  ++  +      A    D+       ED+ GA 
Sbjct: 459 ----------NRASIRYALKDYRGAIADYTQALRLNPHSAAFYSDRGNAHYALEDYQGAI 508

Query: 266 EYFNRSIRVDPENASLYVHRAMLMLQARGNVDEAIKLIEKAISIDKSCMFAYETLGTIEV 325
             +N++I ++P  A  + +R        G++  A+  +++A+ +      AY     +  
Sbjct: 509 ADYNQAIALEPSFADDWFNRGR-SRSLLGDLQGALVDLKQALELQPHWAEAYIVRADVYR 567

Query: 326 QRGRLEEAVKCFNKALPL 343
             G  ++A+  F  +  L
Sbjct: 568 NLGDTQKAIADFQASADL 585


>gi|239832614|ref|ZP_04680943.1| TPR domain-containing protein [Ochrobactrum intermedium LMG 3301]
 gi|444309662|ref|ZP_21145294.1| hypothetical protein D584_07693 [Ochrobactrum intermedium M86]
 gi|239824881|gb|EEQ96449.1| TPR domain-containing protein [Ochrobactrum intermedium LMG 3301]
 gi|443486929|gb|ELT49699.1| hypothetical protein D584_07693 [Ochrobactrum intermedium M86]
          Length = 295

 Score = 76.6 bits (187), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 57/183 (31%), Positives = 85/183 (46%), Gaps = 7/183 (3%)

Query: 167 DPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQRHFVVHKMIVPGDRER 226
           +P   + Y  RG  Y   G+Y+EALR+ D+ IALNPNF+ A A R  V   M   GD  R
Sbjct: 76  NPRDPEGYNVRGSAYGKSGRYKEALRDFDQAIALNPNFYQAYANRALVYRYM---GDSTR 132

Query: 227 VEQSLKEFRNFVDTHSNVVEACTLFAQVLVDQEDFDGAEEYFNRSIRVDPENASLYVHRA 286
             Q   ++   +  +     A      V       D A   FN++I +   +   Y +R 
Sbjct: 133 AAQ---DYSKAIQLNPQYDAAYIGRGNVYRQAGRLDQALSDFNQAIALQTTDGRAYHNRG 189

Query: 287 MLMLQARGNVDEAIKLIEKAISIDKSCMFAYETLGTIEVQRGRLEEAVKCFNKALPLARD 346
            L+ QA+G   +AI+   KA+S++ +    Y   G   V  G  + A   FN A+ L ++
Sbjct: 190 -LIYQAKGQHKQAIEDFSKAVSLNSTAPEPYNGRGISYVALGDYDNAFDDFNTAITLDQN 248

Query: 347 EAE 349
            AE
Sbjct: 249 VAE 251



 Score = 54.7 bits (130), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 48/208 (23%), Positives = 98/208 (47%), Gaps = 12/208 (5%)

Query: 103 LRATVYIFTSQSTKAIEDLTQLVEDTSVDPKIKVNAHIKRAVVHLHAASDFTKAFADLDE 162
           +R + Y  + +  +A+ D  Q +   +++P     A+  RA+V+ +   D T+A  D  +
Sbjct: 85  VRGSAYGKSGRYKEALRDFDQAI---ALNPNF-YQAYANRALVYRYMG-DSTRAAQDYSK 139

Query: 163 AEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQRHFVVHKMIVPG 222
           A +++P    +Y  RG +Y   G+ ++AL + ++ IAL      A   R  +        
Sbjct: 140 AIQLNPQYDAAYIGRGNVYRQAGRLDQALSDFNQAIALQTTDGRAYHNRGLIYQA----- 194

Query: 223 DRERVEQSLKEFRNFVDTHSNVVEACTLFAQVLVDQEDFDGAEEYFNRSIRVDPENASLY 282
            + + +Q++++F   V  +S   E         V   D+D A + FN +I +D   A  +
Sbjct: 195 -KGQHKQAIEDFSKAVSLNSTAPEPYNGRGISYVALGDYDNAFDDFNTAITLDQNVAESW 253

Query: 283 VHRAMLMLQARGNVDEAIKLIEKAISID 310
            ++A L+ +  G+  +A     +A+ +D
Sbjct: 254 ANQA-LVYEHNGDKAKAANSYSRAVQLD 280



 Score = 50.4 bits (119), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 23/49 (46%), Positives = 31/49 (63%)

Query: 479 DPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQRHFVW 527
           +P   + Y  RG  Y   G+Y+EALR+ D+ IALNPNF+ A A R  V+
Sbjct: 76  NPRDPEGYNVRGSAYGKSGRYKEALRDFDQAIALNPNFYQAYANRALVY 124



 Score = 43.5 bits (101), Expect = 0.28,   Method: Compositional matrix adjust.
 Identities = 28/105 (26%), Positives = 51/105 (48%), Gaps = 5/105 (4%)

Query: 104 RATVYIFTSQSTKAIEDLTQLVEDTSVDPKIKVNAHIKRAVVHLHAASDFTKAFADLDEA 163
           R  +Y    Q  +AIED ++ V   S  P+     +  R + ++ A  D+  AF D + A
Sbjct: 188 RGLIYQAKGQHKQAIEDFSKAVSLNSTAPE----PYNGRGISYV-ALGDYDNAFDDFNTA 242

Query: 164 EKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVAR 208
             +D NVA+S+  +  +Y   G   +A  +  + + L+P +  A+
Sbjct: 243 ITLDQNVAESWANQALVYEHNGDKAKAANSYSRAVQLDPKYQPAK 287



 Score = 41.6 bits (96), Expect = 1.00,   Method: Compositional matrix adjust.
 Identities = 33/117 (28%), Positives = 49/117 (41%), Gaps = 15/117 (12%)

Query: 423 MTSILNSNDYEIIPGDPTKTIEESEKYGNLENESGQKHAASDFTKAFADLDEAEKVDPNV 482
           +TS++ SN     P DP         YG    +SG+      + +A  D D+A  ++PN 
Sbjct: 69  LTSVIQSN-----PRDPEGYNVRGSAYG----KSGR------YKEALRDFDQAIALNPNF 113

Query: 483 ADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQRHFVWTSTLAELMAFSD 539
             +Y  R  +Y   G    A ++  K I LNP +  A   R  V+        A SD
Sbjct: 114 YQAYANRALVYRYMGDSTRAAQDYSKAIQLNPQYDAAYIGRGNVYRQAGRLDQALSD 170



 Score = 40.4 bits (93), Expect = 2.2,   Method: Compositional matrix adjust.
 Identities = 29/98 (29%), Positives = 48/98 (48%), Gaps = 1/98 (1%)

Query: 268 FNRSIRVDPENASLYVHRAMLMLQARGNVDEAIKLIEKAISIDKSCMFAYETLGTIEVQR 327
           F+++I ++P     Y +RA L+ +  G+   A +   KAI ++     AY   G +  Q 
Sbjct: 103 FDQAIALNPNFYQAYANRA-LVYRYMGDSTRAAQDYSKAIQLNPQYDAAYIGRGNVYRQA 161

Query: 328 GRLEEAVKCFNKALPLARDEAELSHIYSLRDAAIAQMK 365
           GRL++A+  FN+A+ L   +    H   L   A  Q K
Sbjct: 162 GRLDQALSDFNQAIALQTTDGRAYHNRGLIYQAKGQHK 199


>gi|291569669|dbj|BAI91941.1| TPR domain protein [Arthrospira platensis NIES-39]
          Length = 636

 Score = 76.6 bits (187), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 47/197 (23%), Positives = 95/197 (48%), Gaps = 7/197 (3%)

Query: 153 FTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQRH 212
           +++A    D   K+ P  +D++Y RG +     +Y +AL   ++ + + PN + A   R 
Sbjct: 323 YSEALECYDRTLKIQPKRSDAWYNRGNVLVRLKRYSQALSAYNQALKIQPNDYAAWHNRG 382

Query: 213 FVVHKMIVPGDRERVEQSLKEFRNFVDTHSNVVEACTLFAQVLVDQEDFDGAEEYFNRSI 272
            ++ K       ++ EQ+L+ +   +   +N  E       VL   + +  A   ++R+I
Sbjct: 383 ALLRKF------QKYEQALESYDRAIKLEANHYETWHNRGNVLSQLKRYQEAISSYDRAI 436

Query: 273 RVDPENASLYVHRAMLMLQARGNVDEAIKLIEKAISIDKSCMFAYETLGTIEVQRGRLEE 332
           +++P    ++ +R M +        EA+   E+AIS++      + + G + V+  R EE
Sbjct: 437 QINPGQFDIWANRGMALCHI-NQYSEALSCYEQAISLNSKEPELWISQGGVLVKLARHEE 495

Query: 333 AVKCFNKALPLARDEAE 349
           AV C+++A+ L  D  E
Sbjct: 496 AVICYDRAISLKSDSYE 512



 Score = 56.6 bits (135), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 69/360 (19%), Positives = 157/360 (43%), Gaps = 48/360 (13%)

Query: 168 PNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQRHFVVHKMIVPGDRERV 227
           P +AD + ++G+      QY++A+ + D+ + +NP+   A  Q+   + ++      ++ 
Sbjct: 270 PLIADDFLKKGEALINERQYKQAIASCDRALEINPDLDEAWYQKGNALVQL------KQY 323

Query: 228 EQSLKEFRNFVDTHSNVVEACTLFAQVLVDQEDFDGAEEYFNRSIRVDPENASLYVHRAM 287
            ++L+ +   +       +A      VLV  + +  A   +N+++++ P + + + +R  
Sbjct: 324 SEALECYDRTLKIQPKRSDAWYNRGNVLVRLKRYSQALSAYNQALKIQPNDYAAWHNRGA 383

Query: 288 LMLQARGNVDEAIKLIEKAISIDKSCMFAYETLGTIEVQRGRLEEAVKCFNKALPLARDE 347
           L+ + +   ++A++  ++AI ++ +    +   G +  Q  R +EA+  +++A+ +   +
Sbjct: 384 LLRKFQ-KYEQALESYDRAIKLEANHYETWHNRGNVLSQLKRYQEAISSYDRAIQINPGQ 442

Query: 348 AELSHIYSLRDAAIAQMKVCERYNIKKKVSPRSQNITKNEK---LAIKQLRENNDIIIRP 404
            +   I++ R      M +C      + +S   Q I+ N K   L I Q      ++++ 
Sbjct: 443 FD---IWANRG-----MALCHINQYSEALSCYEQAISLNSKEPELWISQ----GGVLVKL 490

Query: 405 ADKGGKTVVMDKADYTQKMTSILNSNDYEIIPGDPTKTIEESEKYGNLENESGQKHAASD 464
           A      +  D+A         L S+ YE   G            G +        A   
Sbjct: 491 ARHEEAVICYDRA-------ISLKSDSYEAWMGR-----------GEILT------ALKQ 526

Query: 465 FTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQRH 524
           + +A A+ D    + P+   ++ QRG       ++++A+   D  IAL P+   A + RH
Sbjct: 527 YEQALANWDRVIALQPDAYQAWCQRGICLEKLERHDDAIACFDTAIALKPDH--AESWRH 584



 Score = 50.8 bits (120), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 41/197 (20%), Positives = 89/197 (45%), Gaps = 13/197 (6%)

Query: 153 FTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALN---PNFHVARA 209
           + +A +  D A +++P   D +  RG   C   QY EAL   ++ I+LN   P   +++ 
Sbjct: 425 YQEAISSYDRAIQINPGQFDIWANRGMALCHINQYSEALSCYEQAISLNSKEPELWISQG 484

Query: 210 QRHFVVHKMIVPGDRERVEQSLKEFRNFVDTHSNVVEACTLFAQVLVDQEDFDGAEEYFN 269
               V+ K+       R E+++  +   +   S+  EA     ++L   + ++ A   ++
Sbjct: 485 G---VLVKLA------RHEEAVICYDRAISLKSDSYEAWMGRGEILTALKQYEQALANWD 535

Query: 270 RSIRVDPENASLYVHRAMLMLQARGNVDEAIKLIEKAISIDKSCMFAYETLGTIEVQRGR 329
           R I + P+    +  R  + L+     D+AI   + AI++      ++   G +  +  +
Sbjct: 536 RVIALQPDAYQAWCQRG-ICLEKLERHDDAIACFDTAIALKPDHAESWRHRGALLSRLKK 594

Query: 330 LEEAVKCFNKALPLARD 346
            +EA+    KA+ + ++
Sbjct: 595 YQEAIASLGKAISIQKE 611


>gi|357415668|ref|YP_004927403.1| Tetratricopeptide TPR_1 repeat-containing protein [Streptomyces
            flavogriseus ATCC 33331]
 gi|320013204|gb|ADW08052.1| Tetratricopeptide TPR_1 repeat-containing protein [Streptomyces
            flavogriseus ATCC 33331]
          Length = 1261

 Score = 76.6 bits (187), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 101/436 (23%), Positives = 175/436 (40%), Gaps = 61/436 (13%)

Query: 96   TKALARLLRATVYIFTSQSTKAIEDLTQLVEDTSVDPKIKVNAHIKRAVVHLHAASDFTK 155
            T A A   R   +    +  +A+ DLT  +E   +DP     A   R   H  A   + +
Sbjct: 744  TYAAALGARGDTHRLAGRYDEAVTDLTAALE---LDPTYAA-ALGARGDTHRQAGR-YDE 798

Query: 156  AFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQRHFVV 215
            A  D   A ++DP  A +   RG+ +   G+Y+EA+ +L  T+ L+P +  A        
Sbjct: 799  AVTDYTAALELDPTYATALGARGETHRQAGRYDEAVTDLTATLELDPTYAAAL------- 851

Query: 216  HKMIVPGDRERVEQSLKEFRNFVDTHSNVVEACTLFAQVLVDQED-------FDGAEEYF 268
                  G R    +    +   V  ++  +E    +A  L  + D       +D A    
Sbjct: 852  ------GSRGDAHKQASRYDEAVTDYTAALELDPTYATALGSRGDAHRQAGRYDEAVTDL 905

Query: 269  NRSIRVDPENASLYVHRAMLMLQARGNVDEAIKLIEKAISIDKSCMFAYETLGTIEVQRG 328
              ++ +DP NA     R     QA G  DEA+  +  A+ +D +  +A    G    Q G
Sbjct: 906  TAALELDPTNAWAIGSRGQAHQQA-GRYDEAVTDLTAALELDPTLTWALGARGETHQQAG 964

Query: 329  RLEEAVKCFNKALPLARDEAELSHIYSLRDAAIAQMKVCERYNIKKKVSPRSQNITKNEK 388
            R E+AV  +  AL L     + ++ +++     A  +   RY+        +  +     
Sbjct: 965  RYEQAVADYTAALEL-----DPTNAWAIGSRGQAHQQAG-RYDEAVTDLTAALELDPTLT 1018

Query: 389  LAIKQLRENNDIIIRPADKGGKTVVMDKADYTQKMTSILNSNDYEIIPGDPTKTIEESEK 448
             A+    E +    + A +  + V    ADYT  +         E+ P D     +  E 
Sbjct: 1019 WALGARGETH----QQAGRYEQAV----ADYTAAL---------ELDPTDDWALAQRGET 1061

Query: 449  YGNLENESGQ-KHAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLD 507
            +     ++G+ + A +D+T A        ++DP  A +   RGQ +   G+YE+A+ +L 
Sbjct: 1062 H----RQAGRYEQAITDYTAAL-------ELDPTDAWALGSRGQAHQQAGRYEQAVTDLT 1110

Query: 508  KTIALNPNFHVARAQR 523
              + L+P    A A R
Sbjct: 1111 AALELDPTLDWALASR 1126



 Score = 63.5 bits (153), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 111/493 (22%), Positives = 191/493 (38%), Gaps = 79/493 (16%)

Query: 65   LSKAKRAFEH-----EDYLTAIRHCTEEIESTSSNHTKALARLLRATVYIFTSQSTKAIE 119
            L+ A+R  EH     ED   A      E+E T+     A A   R   +    ++ +A+ 
Sbjct: 577  LAWARRGEEHRLLGNEDQAVADLTAALELEPTN-----AWALGSRGETHQQAGRNQEAVA 631

Query: 120  DLTQLVEDTSVDPKIKVNAHIKRAVVHLHAASDFTKAFADLDEAEKVDPNVADSYYQRGQ 179
            DLT  +E   +DP +   A   R   H  A   + +A  D   A ++DP +  +   RG+
Sbjct: 632  DLTAALE---LDPTL-TWALGARGDTHRQAGR-YDEAVTDYTAALELDPTLTWALGARGE 686

Query: 180  IYCLFGQYEEALRNLDKTIALNPNFHV---ARAQRHFVV--HKMIVP------------- 221
             +   G+Y+EA+ +    + L+P +     AR Q H     H+  V              
Sbjct: 687  THRQAGRYDEAVTDYTAALELDPTYATALGARGQAHQQAGRHEQAVTDLTAALELDPTYA 746

Query: 222  ---GDRERVEQSLKEFRNFVDTHSNVVEACTLFAQVLVDQED-------FDGAEEYFNRS 271
               G R    +    +   V   +  +E    +A  L  + D       +D A   +  +
Sbjct: 747  AALGARGDTHRLAGRYDEAVTDLTAALELDPTYAAALGARGDTHRQAGRYDEAVTDYTAA 806

Query: 272  IRVDPENASLYVHRAMLMLQARGNVDEAIKLIEKAISIDKSCMFAYETLGTIEVQRGRLE 331
            + +DP  A+    R     QA G  DEA+  +   + +D +   A  + G    Q  R +
Sbjct: 807  LELDPTYATALGARGETHRQA-GRYDEAVTDLTATLELDPTYAAALGSRGDAHKQASRYD 865

Query: 332  EAVKCFNKALPLARDEAELSHIYSLRDAAIAQMKVCERYNIKKKVSPRSQNITKNEKLAI 391
            EAV  +  AL       EL   Y+          +  R +  ++     + +T  +  A 
Sbjct: 866  EAVTDYTAAL-------ELDPTYA--------TALGSRGDAHRQAGRYDEAVT--DLTAA 908

Query: 392  KQLRENNDIIIRPADKGGKTVVMDKAD-YTQKMTSILNSNDYEIIPGDPTKTIEESEKYG 450
             +L   N   I     G +     +A  Y + +T +  + +      DPT T     + G
Sbjct: 909  LELDPTNAWAI-----GSRGQAHQQAGRYDEAVTDLTAALEL-----DPTLTWALGAR-G 957

Query: 451  NLENESGQKHAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTI 510
                ++G+      + +A AD   A ++DP  A +   RGQ +   G+Y+EA+ +L   +
Sbjct: 958  ETHQQAGR------YEQAVADYTAALELDPTNAWAIGSRGQAHQQAGRYDEAVTDLTAAL 1011

Query: 511  ALNPNFHVARAQR 523
             L+P    A   R
Sbjct: 1012 ELDPTLTWALGAR 1024


>gi|409994020|ref|ZP_11277142.1| hypothetical protein APPUASWS_22928 [Arthrospira platensis str.
           Paraca]
 gi|409935094|gb|EKN76636.1| hypothetical protein APPUASWS_22928 [Arthrospira platensis str.
           Paraca]
          Length = 636

 Score = 76.6 bits (187), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 47/197 (23%), Positives = 95/197 (48%), Gaps = 7/197 (3%)

Query: 153 FTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQRH 212
           +++A    D   K+ P  +D++Y RG +     +Y +AL   ++ + + PN + A   R 
Sbjct: 323 YSEALECYDRTLKIQPKRSDAWYNRGNVLVRLKRYSQALSAYNQALKIQPNDYAAWHNRG 382

Query: 213 FVVHKMIVPGDRERVEQSLKEFRNFVDTHSNVVEACTLFAQVLVDQEDFDGAEEYFNRSI 272
            ++ K       ++ EQ+L+ +   +   +N  E       VL   + +  A   ++R+I
Sbjct: 383 ALLRKF------QKYEQALESYDRAIKLEANHYETWHNRGNVLSQLKRYQEAISSYDRAI 436

Query: 273 RVDPENASLYVHRAMLMLQARGNVDEAIKLIEKAISIDKSCMFAYETLGTIEVQRGRLEE 332
           +++P    ++ +R M +        EA+   E+AIS++      + + G + V+  R EE
Sbjct: 437 QINPGQFDIWANRGMALCHI-NQYSEALSCYEQAISLNSKEPELWISQGGVLVKLARHEE 495

Query: 333 AVKCFNKALPLARDEAE 349
           AV C+++A+ L  D  E
Sbjct: 496 AVICYDRAISLKSDSYE 512



 Score = 56.2 bits (134), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 69/360 (19%), Positives = 157/360 (43%), Gaps = 48/360 (13%)

Query: 168 PNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQRHFVVHKMIVPGDRERV 227
           P +AD + ++G+      QY++A+ + D+ + +NP+   A  Q+   + ++      ++ 
Sbjct: 270 PLIADDFLKKGEALINERQYKQAIASCDRALEINPDLDEAWYQKGNALVQL------KQY 323

Query: 228 EQSLKEFRNFVDTHSNVVEACTLFAQVLVDQEDFDGAEEYFNRSIRVDPENASLYVHRAM 287
            ++L+ +   +       +A      VLV  + +  A   +N+++++ P + + + +R  
Sbjct: 324 SEALECYDRTLKIQPKRSDAWYNRGNVLVRLKRYSQALSAYNQALKIQPNDYAAWHNRGA 383

Query: 288 LMLQARGNVDEAIKLIEKAISIDKSCMFAYETLGTIEVQRGRLEEAVKCFNKALPLARDE 347
           L+ + +   ++A++  ++AI ++ +    +   G +  Q  R +EA+  +++A+ +   +
Sbjct: 384 LLRKFQ-KYEQALESYDRAIKLEANHYETWHNRGNVLSQLKRYQEAISSYDRAIQINPGQ 442

Query: 348 AELSHIYSLRDAAIAQMKVCERYNIKKKVSPRSQNITKNEK---LAIKQLRENNDIIIRP 404
            +   I++ R      M +C      + +S   Q I+ N K   L I Q      ++++ 
Sbjct: 443 FD---IWANRG-----MALCHINQYSEALSCYEQAISLNSKEPELWISQ----GGVLVKL 490

Query: 405 ADKGGKTVVMDKADYTQKMTSILNSNDYEIIPGDPTKTIEESEKYGNLENESGQKHAASD 464
           A      +  D+A         L S+ YE   G            G +        A   
Sbjct: 491 ARHEEAVICYDRA-------ISLKSDSYEAWMGR-----------GEILT------ALKQ 526

Query: 465 FTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQRH 524
           + +A A+ D    + P+   ++ QRG       ++++A+   D  IAL P+   A + RH
Sbjct: 527 YEQALANWDRVIALQPDAYQAWCQRGICLEKLERHDDAIACFDTAIALKPDH--AESWRH 584



 Score = 50.8 bits (120), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 41/197 (20%), Positives = 89/197 (45%), Gaps = 13/197 (6%)

Query: 153 FTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALN---PNFHVARA 209
           + +A +  D A +++P   D +  RG   C   QY EAL   ++ I+LN   P   +++ 
Sbjct: 425 YQEAISSYDRAIQINPGQFDIWANRGMALCHINQYSEALSCYEQAISLNSKEPELWISQG 484

Query: 210 QRHFVVHKMIVPGDRERVEQSLKEFRNFVDTHSNVVEACTLFAQVLVDQEDFDGAEEYFN 269
               V+ K+       R E+++  +   +   S+  EA     ++L   + ++ A   ++
Sbjct: 485 G---VLVKLA------RHEEAVICYDRAISLKSDSYEAWMGRGEILTALKQYEQALANWD 535

Query: 270 RSIRVDPENASLYVHRAMLMLQARGNVDEAIKLIEKAISIDKSCMFAYETLGTIEVQRGR 329
           R I + P+    +  R  + L+     D+AI   + AI++      ++   G +  +  +
Sbjct: 536 RVIALQPDAYQAWCQRG-ICLEKLERHDDAIACFDTAIALKPDHAESWRHRGALLSRLKK 594

Query: 330 LEEAVKCFNKALPLARD 346
            +EA+    KA+ + ++
Sbjct: 595 YQEAIASLGKAISIQKE 611


>gi|158335104|ref|YP_001516276.1| hypothetical protein AM1_1945 [Acaryochloris marina MBIC11017]
 gi|158305345|gb|ABW26962.1| TPR domain protein [Acaryochloris marina MBIC11017]
          Length = 593

 Score = 76.6 bits (187), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 71/263 (26%), Positives = 122/263 (46%), Gaps = 15/263 (5%)

Query: 103 LRATVYIFTSQSTKAIEDLTQLVEDTSVDPKIKVNAHIKRAVVHLHAASDFTKAFADLDE 162
           L+AT  +    S  A+ DL Q +   S++P    NA+  RA +      D   A ADLD+
Sbjct: 269 LQATDKLQRGDSQGALRDLNQAI---SLNPNY-ANAYGDRATIKFQQG-DRRGALADLDQ 323

Query: 163 AEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQRHFV-VHKMIVP 221
           A ++DP +AD+Y  RG    + G    A  +++K + L P   +  A R  V  ++  + 
Sbjct: 324 AIQIDPQLADAYGIRGLYRVVTGNIRGAQSDVEKAVRLKP--EIGYASRGVVRWYRSDLA 381

Query: 222 GDRERVEQSLKEFRNFVDTHSNVVEACTLFAQVLVDQ-EDFDGAEEYFNRSIRVDPENAS 280
           G +   +Q+L    +F D +     A   F   +  Q  +FDGA +  NRSI+++P+   
Sbjct: 382 GAQSDFDQALSLKDSFKDAY-----AVHYFRGFVRWQLGNFDGALQDLNRSIQLNPKYLE 436

Query: 281 LYVHRAMLMLQARGNVDEAIKLIEKAISIDKSCMFAYETLGTIEVQRGRLEEAVKCFNKA 340
               R +L  Q  G+   A++  ++ I I+      Y   G I + +G  + A+  F++ 
Sbjct: 437 AVGVRGILRFQM-GDEVGALRDFDEGIRINTGSSDIYTIRGMIRLTQGDSQGAISDFDQV 495

Query: 341 LPLARDEAELSHIYSLRDAAIAQ 363
           + +      L+ +Y  R  A  Q
Sbjct: 496 IRIQPGNVALADMYGSRGIAYFQ 518



 Score = 41.2 bits (95), Expect = 1.3,   Method: Compositional matrix adjust.
 Identities = 32/113 (28%), Positives = 49/113 (43%), Gaps = 4/113 (3%)

Query: 417 ADYTQKMTSILNSNDYEIIPGDPTKTIEESEKYGNLENESGQ-KHAASDFTKAFADLDEA 475
            D+  + T  L   D +    D  + I  +  Y N   +    K    D   A ADLD+A
Sbjct: 265 GDFYLQATDKLQRGDSQGALRDLNQAISLNPNYANAYGDRATIKFQQGDRRGALADLDQA 324

Query: 476 EKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQRHFV-W 527
            ++DP +AD+Y  RG    + G    A  +++K + L P   +  A R  V W
Sbjct: 325 IQIDPQLADAYGIRGLYRVVTGNIRGAQSDVEKAVRLKP--EIGYASRGVVRW 375


>gi|430743555|ref|YP_007202684.1| hypothetical protein Sinac_2691 [Singulisphaera acidiphila DSM
           18658]
 gi|430015275|gb|AGA26989.1| TPR repeat-containing protein [Singulisphaera acidiphila DSM 18658]
          Length = 654

 Score = 76.6 bits (187), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 92/385 (23%), Positives = 156/385 (40%), Gaps = 50/385 (12%)

Query: 140 IKRAVVHLHAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIA 199
           ++   + L  A D+  A    DE  K  P   ++  +RG  Y    Q  +A+ + D  I 
Sbjct: 32  VRAEALRLFEAGDYRSALPQFDEVLKRKPRDLEARTKRGVAYLRLNQPAQAMADFDAVIR 91

Query: 200 LNPNFHVARAQRHFVVHKMIVPGD----RERVEQSLKEFR-NFVDTHSNVVEACTLFAQV 254
           + P  + +   R       ++ G+    R+  +QSL     +F    +++  A     QV
Sbjct: 92  ITPWSYSSHIDRGIA---RVMLGEYEDARKDFDQSLGLLALSFKRDPTSLANAHCGLGQV 148

Query: 255 LVDQEDFDGAEEYFNRSIRVDPENASLYVHRAMLMLQARGNVDEAIKLIEKAISIDKSCM 314
                  D A E +  +IR +P + S ++ RA  ++  + + ++A+    +AI ++    
Sbjct: 149 AHRLGQDDVAIEQYGEAIRANPSDPSGFLGRAEALVSKK-DFEQALPDFGEAIRLNPRQS 207

Query: 315 FAYETLGTIEVQRGRLEEAVKCFNKALPLARDEAELSHIYSLRDAAIAQMKVCER----Y 370
            AY   G    Q GRL+EA+  F+ A+ L  D AE    +S R + +AQ+   ER     
Sbjct: 208 RAYGFRGDALWQLGRLKEALADFDNAIELDADNAE---AHSRRGSLLAQLGENERALPDL 264

Query: 371 NIKKKVSPRSQNITKNEKLAIKQLRENNDIIIRPADKGGKTVVMDKADYTQKMTSILNSN 430
           +   +++PR     K                    D+GG  V + +  Y Q +  +  S 
Sbjct: 265 DAVIRLNPRRAAAYK--------------------DRGGVLVRLGR--YDQAIEDLNKS- 301

Query: 431 DYEIIPGDPTKTIEESEKYGNLENESGQKHAASDFTKAFADLDEAEKVDPNVADSYYQRG 490
              I PG  +        Y  L          + + KA  DL+EA  +DP    +    G
Sbjct: 302 -ITIDPGRASSYQNRGAAYSGL----------AQYEKAVGDLNEAIHLDPTNPGARTNLG 350

Query: 491 QIYCLFGQYEEALRNLDKTIALNPN 515
                 GQYE AL  +++   L PN
Sbjct: 351 LALFALGQYERALAEMNEATRLAPN 375



 Score = 72.4 bits (176), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 112/487 (22%), Positives = 204/487 (41%), Gaps = 54/487 (11%)

Query: 63  DLLSKAKRAFEHEDYLTAIRHCTEEIESTSSNHTKALARLLRATVYIFTSQSTKAIEDLT 122
           D+ ++A R FE  DY +A+    E ++    +     AR  R   Y+  +Q  +A+ D  
Sbjct: 31  DVRAEALRLFEAGDYRSALPQFDEVLKRKPRDLE---ARTKRGVAYLRLNQPAQAMADFD 87

Query: 123 QLVEDTSVDPKIKVNAHIKRAVVHLH------AASDFTKAFADLDEAEKVDP-NVADSYY 175
            ++  T        ++HI R +  +       A  DF ++   L  + K DP ++A+++ 
Sbjct: 88  AVIRIT----PWSYSSHIDRGIARVMLGEYEDARKDFDQSLGLLALSFKRDPTSLANAHC 143

Query: 176 QRGQIYCLFGQYEEALRNLDKTIALNPN---FHVARAQRHFVVHKMIVPGDRERVEQSLK 232
             GQ+    GQ + A+    + I  NP+     + RA+   +V K       +  EQ+L 
Sbjct: 144 GLGQVAHRLGQDDVAIEQYGEAIRANPSDPSGFLGRAE--ALVSK-------KDFEQALP 194

Query: 233 EFRNFVDTHSNVVEACTLFAQVLVDQEDFDGAEEYFNRSIRVDPENASLYVHRAMLMLQA 292
           +F   +  +     A       L        A   F+ +I +D +NA  +  R  L+ Q 
Sbjct: 195 DFGEAIRLNPRQSRAYGFRGDALWQLGRLKEALADFDNAIELDADNAEAHSRRGSLLAQL 254

Query: 293 RGNVDEAIKLIEKAISIDKSCMFAYETLGTIEVQRGRLEEAVKCFNKALPLARDEAELSH 352
            G  + A+  ++  I ++     AY+  G + V+ GR ++A++  NK++ +  D    S 
Sbjct: 255 -GENERALPDLDAVIRLNPRRAAAYKDRGGVLVRLGRYDQAIEDLNKSITI--DPGRASS 311

Query: 353 IYSLRDAAIAQMKVCER----YNIKKKVSPRSQNITKNEKLAI-------KQLRENNDII 401
            Y  R AA + +   E+     N    + P +     N  LA+       + L E N+  
Sbjct: 312 -YQNRGAAYSGLAQYEKAVGDLNEAIHLDPTNPGARTNLGLALFALGQYERALAEMNEAT 370

Query: 402 -IRPADKGGKTVVMDKADYTQKMTSILNS-NDY-EIIPGDPTKTIEESEKYGNLENESGQ 458
            + P +     V +++A    ++  +  +  DY E +  DP K I      G  ++  G+
Sbjct: 371 RLAPNNS---LVFLNRAGTYARLGLLDRAVEDYNEALRLDP-KAILAHVGLGKAQDSLGR 426

Query: 459 KHAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHV 518
           +       +A    D A +++P  A  Y  RG      G ++ AL +  K I LNP +  
Sbjct: 427 R------VQAIHSYDMALQLNPTNARVYTSRGNARRAEGDWKGALEDFSKAIELNPKYAE 480

Query: 519 ARAQRHF 525
           A   R +
Sbjct: 481 AYVLRGW 487



 Score = 39.3 bits (90), Expect = 5.6,   Method: Compositional matrix adjust.
 Identities = 47/172 (27%), Positives = 68/172 (39%), Gaps = 22/172 (12%)

Query: 54  GDTNESHELDLLSKAKRA------FEHEDYLTAIRHCTEEIESTSSNHTKALARLLRATV 107
           GD NE+  LD  +   R       F    Y  A+    E      +N   +L  L RA  
Sbjct: 330 GDLNEAIHLDPTNPGARTNLGLALFALGQYERALAEMNEATRLAPNN---SLVFLNRAGT 386

Query: 108 YIFTSQSTKAIEDLTQLVEDTSVDPKIKVNAHIKRAVVHLHAASDF----TKAFADLDEA 163
           Y       +A+ED  + +    +DPK  + AH     V L  A D      +A    D A
Sbjct: 387 YARLGLLDRAVEDYNEALR---LDPK-AILAH-----VGLGKAQDSLGRRVQAIHSYDMA 437

Query: 164 EKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQRHFVV 215
            +++P  A  Y  RG      G ++ AL +  K I LNP +  A   R + +
Sbjct: 438 LQLNPTNARVYTSRGNARRAEGDWKGALEDFSKAIELNPKYAEAYVLRGWSL 489


>gi|225620729|ref|YP_002721987.1| TPR domain-containing protein [Brachyspira hyodysenteriae WA1]
 gi|225215549|gb|ACN84283.1| TPR domain-containing protein [Brachyspira hyodysenteriae WA1]
          Length = 771

 Score = 76.6 bits (187), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 70/291 (24%), Positives = 129/291 (44%), Gaps = 16/291 (5%)

Query: 63  DLLSKAKRAFEHEDYLTAIRHCTEEIESTSSNHTKALARLLRATVYIFTSQSTKAIEDLT 122
           +L +K  +    + +   I+ C E IE    +     A  +RA  Y         IE+L 
Sbjct: 4   ELKTKIHKLILEKKFTEIIKLCDEAIEKDDKDE---YAYFIRANCYFDLKNYDMVIENLN 60

Query: 123 QLVEDTSVDPKIKVNAHIKRAVVHLHAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYC 182
           + +E    + K    A+  R  +  +    + ++  D  +  +++PN   +Y+ RG I  
Sbjct: 61  KSIELNPNNEK----AYFNRGFIESNLEM-YEESINDYTKVTELNPNDEKAYFNRGLIKS 115

Query: 183 LFGQYEEALRNLDKTIALNPNFHVARAQRHFVVHKMIVPGDRERVEQSLKEFRNFVDTHS 242
               Y+EA+ +  K I LNPN  +A   R F         + E  E+++ ++ N ++ + 
Sbjct: 116 NLEMYKEAIDDYTKVIELNPNNEIAYINRGF------AKSNLEMYEEAIHDYINVIELNP 169

Query: 243 NVVEACTLFAQVLVDQEDFDGAEEYFNRSIRVDPENASLYVHRAMLMLQARGNVDEAIKL 302
           N   A         D + ++ A  YFN+SI +DP +   Y+ R    L  +   +EAIK 
Sbjct: 170 NNKLAYINIGFTKSDLKMYEEAIYYFNKSIELDPNDKISYISRGFSKLNLKM-YEEAIKD 228

Query: 303 IEKAISIDKSCMFAYETLGTIEVQRGRLEEAVKCFNKALPLARDEAELSHI 353
            +K I ++ +   AY      ++     EEA+K F K +  A ++ E +++
Sbjct: 229 FDKVIELNPNDESAYFNRALSKLNLEIYEEAIKDFTKVIE-ANNKNEYAYL 278



 Score = 52.4 bits (124), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 84/379 (22%), Positives = 144/379 (37%), Gaps = 80/379 (21%)

Query: 140 IKRAVVHLHAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIA 199
           +K  +  L     FT+     DEA + D     +Y+ R   Y     Y+  + NL+K+I 
Sbjct: 5   LKTKIHKLILEKKFTEIIKLCDEAIEKDDKDEYAYFIRANCYFDLKNYDMVIENLNKSIE 64

Query: 200 LNPNFHVARAQRHFVVHKMIVPGDRERVEQSLKEFRNFVDTHSNVVEACTLFAQVLVDQE 259
           LNPN   A   R F+        + E  E+S+ ++    + + N  +A      +  + E
Sbjct: 65  LNPNNEKAYFNRGFI------ESNLEMYEESINDYTKVTELNPNDEKAYFNRGLIKSNLE 118

Query: 260 DFDGAEEYFNRSIRVDPENASLYVHRAMLMLQARGNVD---EAIKLIEKAISIDKSCMFA 316
            +  A + + + I ++P N   Y++R      A+ N++   EAI      I ++ +   A
Sbjct: 119 MYKEAIDDYTKVIELNPNNEIAYINRGF----AKSNLEMYEEAIHDYINVIELNPNNKLA 174

Query: 317 YETLGTIEVQRGRLEEAVKCFNKALPLARDEAELSHIYSLRDAAIAQMKVCERYNIKKKV 376
           Y  +G  +      EEA+  FNK++ L  ++                           K+
Sbjct: 175 YINIGFTKSDLKMYEEAIYYFNKSIELDPND---------------------------KI 207

Query: 377 SPRSQNITKNEKLAIKQLRENNDIIIRPADKGGKTVVMDKADYTQKMTSILNSNDYEIIP 436
           S  S+  +K   L +K   E     I+  DK  +    D++ Y  +  S LN   YE   
Sbjct: 208 SYISRGFSK---LNLKMYEE----AIKDFDKVIELNPNDESAYFNRALSKLNLEIYEEAI 260

Query: 437 GDPTKTIEESEKYGNLENESGQKHAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLF 496
            D TK IE           +  K+  +     FA ++                       
Sbjct: 261 KDFTKVIE-----------ANNKNEYAYLLIVFAQIN----------------------L 287

Query: 497 GQYEEALRNLDKTIALNPN 515
            +Y E++  +DK I LN N
Sbjct: 288 KKYRESINYIDKAIELNNN 306



 Score = 39.3 bits (90), Expect = 4.8,   Method: Compositional matrix adjust.
 Identities = 19/61 (31%), Positives = 32/61 (52%)

Query: 465 FTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQRH 524
           + ++  D  +  +++PN   +Y+ RG I      Y+EA+ +  K I LNPN  +A   R 
Sbjct: 86  YEESINDYTKVTELNPNDEKAYFNRGLIKSNLEMYKEAIDDYTKVIELNPNNEIAYINRG 145

Query: 525 F 525
           F
Sbjct: 146 F 146


>gi|118356032|ref|XP_001011275.1| TPR Domain containing protein [Tetrahymena thermophila]
 gi|89293042|gb|EAR91030.1| TPR Domain containing protein [Tetrahymena thermophila SB210]
          Length = 1013

 Score = 76.3 bits (186), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 50/199 (25%), Positives = 102/199 (51%), Gaps = 7/199 (3%)

Query: 145 VHLHAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNF 204
           V L     F ++   LD+A K++P    SY  +G IY    Q +EAL   +K+I LNP+ 
Sbjct: 530 VVLRKLKQFDESIIFLDKAIKINPKSDLSYLNKGIIYHQKNQIKEALELFNKSIELNPSN 589

Query: 205 HVARAQRHFVVHKMIVPGDRERVEQSLKEFRNFVDTHSNVVEACTLFAQVLVDQEDFDGA 264
           + A   +    H++ +       +++L+     ++ +   +EA     ++L  ++ +D +
Sbjct: 590 YEAYFCKSVASHQLNLQ------QEALQSVNQAIELNQRYLEAILFKGELLCSEQKYDES 643

Query: 265 EEYFNRSIRVDPENASLYVHRAMLMLQARGNVDEAIKLIEKAISIDKSCMFAYETLGTIE 324
            + FN++I ++ +    Y      +   + N +EA++ + K+I I+     +Y T G+I 
Sbjct: 644 LDIFNKAININSQCYKAYSKMGKSLF-CKKNYNEALEYLNKSIQINSQFDESYNTKGSIF 702

Query: 325 VQRGRLEEAVKCFNKALPL 343
           +   + +EA++CFN+A+ L
Sbjct: 703 LALNKTDEALQCFNQAISL 721



 Score = 75.5 bits (184), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 52/191 (27%), Positives = 98/191 (51%), Gaps = 7/191 (3%)

Query: 153 FTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQRH 212
           F ++    ++A +++PN+++ Y+++ QI+   GQ  EAL  LDK I ++PN +    Q+ 
Sbjct: 402 FDQSLKYYNKALEINPNLSNLYFKKSQIFQKNGQINEALEQLDKAIQISPNQYQGYLQKG 461

Query: 213 FVVHKMIVPGDRERVEQSLKEFRNFVDTHSNVVEACTLFAQVLVDQEDFDGAEEYFNRSI 272
            ++ +   P      EQ+L  F   +       +A     Q+L +Q +   A   FN  I
Sbjct: 462 LLLRQNDQP------EQALTYFDLTLKIDLKNYQANLYKGQILNNQGNLQEALTCFNFMI 515

Query: 273 RVDPENASLYVHRAMLMLQARGNVDEAIKLIEKAISIDKSCMFAYETLGTIEVQRGRLEE 332
           +  P     Y H  +++ + +   DE+I  ++KAI I+     +Y   G I  Q+ +++E
Sbjct: 516 QTWPNIDQGYSHLGVVLRKLK-QFDESIIFLDKAIKINPKSDLSYLNKGIIYHQKNQIKE 574

Query: 333 AVKCFNKALPL 343
           A++ FNK++ L
Sbjct: 575 ALELFNKSIEL 585



 Score = 67.4 bits (163), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 92/432 (21%), Positives = 182/432 (42%), Gaps = 92/432 (21%)

Query: 122 TQLVEDTSVDPKIKVNAHIKRAVVHLHAASDFTKAFADLDEAEKVDPNVADSYYQRGQIY 181
            QL+++   DP+  +  ++K     L     + +A  +LD++ +++P+  ++Y  +  I 
Sbjct: 103 NQLIQN---DPQNFIGYYLKGCT--LMRTLSYDEALLNLDQSLELNPDQFNAYNIKAYIL 157

Query: 182 CLFGQYEEALRNLDKTIALNPNFHVARAQRHFVVHKMIVPGDRERVEQSLKEFRNFVDTH 241
              GQ +EA+   DK I+L P++ ++   +   ++K+   G +   +QS+  +   ++ +
Sbjct: 158 SKKGQTKEAIYFYDKAISLKPDYQLSYTNKIIELNKL---GQK---QQSIVCYDKLLELN 211

Query: 242 SNVVEACTLFAQVLVDQEDFDGAEEYFNRSIRVDPENASLYVHRAML------------- 288
                  T   ++L+D   F  A+  F ++I +DP++   Y+ R +L             
Sbjct: 212 PKSANYYTKKGKLLIDLNLFGEADLCFKKAIELDPKDTDAYIQRGILNYEQKQYDESLES 271

Query: 289 --------------------MLQARGNVDEAIKLIEKAISIDKSCMFAYETLGTIEVQRG 328
                               + + +    E+++ I KAI ID     A+   G +    G
Sbjct: 272 LYRALEINPFLSEAHLQIAVLFKTQKKYQESLESINKAIDIDFQFQQAFNKKGELLQILG 331

Query: 329 RLEEAVKCFNKALPL-------ARDEAELSHIYSLRDAAIAQMKVCERYNIKKKVSPRSQ 381
           +  EA++CF KA+ L         ++A+L    + +  A+     C +Y I+++V P+S 
Sbjct: 332 KETEALQCFEKAIELNPKYKLALNNKAKLLEQLNQKKEALN----CYKY-IQEEVEPQSV 386

Query: 382 NITKNEKLAIKQLRENNDIIIRPADKGGKTVVMDKA-DYTQKMTSILNSNDYEIIPGDPT 440
           N                 II + AD      + D++  Y  K          EI P    
Sbjct: 387 N-----------------IIQKIADISFDLELFDQSLKYYNKAL--------EINPNLSN 421

Query: 441 KTIEESEKYGNLENESGQKHAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYE 500
              ++S+ +     ++GQ        +A   LD+A ++ PN    Y Q+G +     Q E
Sbjct: 422 LYFKKSQIF----QKNGQ------INEALEQLDKAIQISPNQYQGYLQKGLLLRQNDQPE 471

Query: 501 EALRNLDKTIAL 512
           +AL   D T+ +
Sbjct: 472 QALTYFDLTLKI 483



 Score = 47.4 bits (111), Expect = 0.020,   Method: Compositional matrix adjust.
 Identities = 53/228 (23%), Positives = 107/228 (46%), Gaps = 30/228 (13%)

Query: 127 DTSVDPKIKVNAHIKRAVVHLHAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQ 186
           DT  D +  V  ++ +A   L  A    +A     +A +V+P    +Y ++G I     +
Sbjct: 2   DTITDNQTDVQEYLNKAD-DLFKAQSKDEALILCSKAIEVNPQYPQAYLKKGIILMDLDK 60

Query: 187 YEEALRNLDKTIALNPNFHVARAQRHFVVHKMIVP--GDRERVEQSLK--------EFRN 236
            +EA     K + L+P        ++  + K IV    ++++  +SL+        + +N
Sbjct: 61  KKEASEYFQKALELDP--------KNIEILKKIVTLNNNQQKYSESLQLSNQLIQNDPQN 112

Query: 237 FVDTHSNVVEACTLFAQVLVDQEDFDGAEEYFNRSIRVDPENASLYVHRAMLMLQARGNV 296
           F+  +   ++ CTL   +      +D A    ++S+ ++P+  + Y  +A + L  +G  
Sbjct: 113 FIGYY---LKGCTLMRTL-----SYDEALLNLDQSLELNPDQFNAYNIKAYI-LSKKGQT 163

Query: 297 DEAIKLIEKAISIDKSCMFAYETLGTIEVQR-GRLEEAVKCFNKALPL 343
            EAI   +KAIS+      +Y T   IE+ + G+ ++++ C++K L L
Sbjct: 164 KEAIYFYDKAISLKPDYQLSY-TNKIIELNKLGQKQQSIVCYDKLLEL 210



 Score = 43.1 bits (100), Expect = 0.35,   Method: Compositional matrix adjust.
 Identities = 19/62 (30%), Positives = 38/62 (61%)

Query: 465 FTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQRH 524
           F ++    ++A +++PN+++ Y+++ QI+   GQ  EAL  LDK I ++PN +    Q+ 
Sbjct: 402 FDQSLKYYNKALEINPNLSNLYFKKSQIFQKNGQINEALEQLDKAIQISPNQYQGYLQKG 461

Query: 525 FV 526
            +
Sbjct: 462 LL 463


>gi|425446027|ref|ZP_18826041.1| Tetratricopeptide repeat protein (fragment) [Microcystis aeruginosa
           PCC 9443]
 gi|389733863|emb|CCI02417.1| Tetratricopeptide repeat protein (fragment) [Microcystis aeruginosa
           PCC 9443]
          Length = 396

 Score = 76.3 bits (186), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 57/202 (28%), Positives = 100/202 (49%), Gaps = 10/202 (4%)

Query: 156 AFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQRHFVV 215
           A AD ++A K++PN   +Y  RG++Y    +YE AL + +K I +NPN   A   R  + 
Sbjct: 8   ALADFNKAMKLNPNYDLAYSGRGELYYYQKKYELALADFNKAIDINPNLASAYNNRGLIY 67

Query: 216 HKMIVPGDRERVEQSLKEFRNFVDTHSNVVEACTLFAQVLVDQEDFDGAEEYFNRSIRVD 275
           +       +++ E +L +F   ++  S +  A +    +  DQ+ ++ A   FN++I +D
Sbjct: 68  YY------QKKYELALADFNKAIELDSKLAIAYSNRGNIYSDQQKYELALADFNKAIELD 121

Query: 276 PENASLYVHRAMLMLQARGNVDEAIKLIEKAISIDKSCMFAYETLGTIEVQRGRLEEAVK 335
            + A  Y +R       +   + A+    KAI +D     AY   G I   + + E A+ 
Sbjct: 122 SKLAEAYSNRGRFYYYQQ-KYELALADFNKAIELDSKLAGAYSNRGNIYSDQQKYELALA 180

Query: 336 CFNKALPLARDEAELSHIYSLR 357
            FNKA+ L   +++L+  YS R
Sbjct: 181 DFNKAIEL---DSKLAMAYSNR 199



 Score = 73.9 bits (180), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 82/335 (24%), Positives = 143/335 (42%), Gaps = 42/335 (12%)

Query: 186 QYEEALRNLDKTIALNPNFHVARAQRHFVVHKMIVPGDRERVEQSLKEFRNFVDTHSNVV 245
           +YE AL + +K + LNPN+ +A + R  + +       +++ E +L +F   +D + N+ 
Sbjct: 4   KYELALADFNKAMKLNPNYDLAYSGRGELYYY------QKKYELALADFNKAIDINPNLA 57

Query: 246 EACTLFAQVLVDQEDFDGAEEYFNRSIRVDPENASLYVHRAMLMLQARGNVDEAIKLIEK 305
            A      +   Q+ ++ A   FN++I +D + A  Y +R  +    +   + A+    K
Sbjct: 58  SAYNNRGLIYYYQKKYELALADFNKAIELDSKLAIAYSNRGNIY-SDQQKYELALADFNK 116

Query: 306 AISIDKSCMFAYETLGTIEVQRGRLEEAVKCFNKALPLARDEAELSHIYSLRDAAIAQMK 365
           AI +D     AY   G     + + E A+  FNKA+ L   +++L+  YS R    +  +
Sbjct: 117 AIELDSKLAEAYSNRGRFYYYQQKYELALADFNKAIEL---DSKLAGAYSNRGNIYSDQQ 173

Query: 366 VCERYNIKKKVSPRSQNITKNEKLAIKQLRENNDIIIRPADKGGKTVVMDKADYTQKMTS 425
             E       ++  ++ I  + KLA+                           Y+ +   
Sbjct: 174 KYEL-----ALADFNKAIELDSKLAMA--------------------------YSNRGRF 202

Query: 426 ILNSNDYEIIPGDPTKTIEESEKYG-NLENESGQKHAASDFTKAFADLDEAEKVDPNVAD 484
                 YE+   D  K IE   K      N  G          A AD ++A ++D  +A+
Sbjct: 203 YYYQQKYELALADINKAIELDSKLAMAYSNRGGIYSLQQKDELALADFNKAIELDSKLAE 262

Query: 485 SYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVA 519
           +YY RG +Y L  +YE AL + +K I LN N   A
Sbjct: 263 AYYNRGNLYRLQQKYELALSDYNKAIKLNKNAWFA 297



 Score = 57.8 bits (138), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 75/305 (24%), Positives = 139/305 (45%), Gaps = 31/305 (10%)

Query: 50  ELTNGDTNESHELDLLSKAKRAF--------EHEDYLTAIRHCTEEIESTSSNHTKALAR 101
           EL   D N++ ELD  SK   A+        + + Y  A+    + IE  S     A A 
Sbjct: 74  ELALADFNKAIELD--SKLAIAYSNRGNIYSDQQKYELALADFNKAIELDS---KLAEAY 128

Query: 102 LLRATVYIFTSQSTKAIEDLTQLVEDTSVDPKIKVNAHIKRAVVHLHAASDFTK---AFA 158
             R   Y +  +   A+ D  + +E   +D K+   A+  R  ++    SD  K   A A
Sbjct: 129 SNRGRFYYYQQKYELALADFNKAIE---LDSKL-AGAYSNRGNIY----SDQQKYELALA 180

Query: 159 DLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQRHFVVHKM 218
           D ++A ++D  +A +Y  RG+ Y    +YE AL +++K I L+    +A + R  +    
Sbjct: 181 DFNKAIELDSKLAMAYSNRGRFYYYQQKYELALADINKAIELDSKLAMAYSNRGGIYSL- 239

Query: 219 IVPGDRERVEQSLKEFRNFVDTHSNVVEACTLFAQVLVDQEDFDGAEEYFNRSIRVDPEN 278
                +++ E +L +F   ++  S + EA      +   Q+ ++ A   +N++I+++ +N
Sbjct: 240 -----QQKDELALADFNKAIELDSKLAEAYYNRGNLYRLQQKYELALSDYNKAIKLN-KN 293

Query: 279 ASLYVHRAMLMLQARGNVDEAIKLIEKAISIDKSCMFAYETLGTIEVQRGRLEEAVKCFN 338
           A   +    L+   +G++ EAIK  +KA+ I+         L      +G  ++A+K   
Sbjct: 294 AWFAMMGIGLVKYEQGSISEAIKQWKKALIINNQSAEIQLALAVAFYHQGEKDKALKLAE 353

Query: 339 KALPL 343
            AL +
Sbjct: 354 SALSI 358



 Score = 53.1 bits (126), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 72/317 (22%), Positives = 132/317 (41%), Gaps = 36/317 (11%)

Query: 224 RERVEQSLKEFRNFVDTHSNVVEACTLFAQVLVDQEDFDGAEEYFNRSIRVDPENASLYV 283
           +++ E +L +F   +  + N   A +   ++   Q+ ++ A   FN++I ++P  AS Y 
Sbjct: 2   QKKYELALADFNKAMKLNPNYDLAYSGRGELYYYQKKYELALADFNKAIDINPNLASAYN 61

Query: 284 HRAMLMLQARGNVDEAIKLIEKAISIDKSCMFAYETLGTIEVQRGRLEEAVKCFNKALPL 343
           +R ++    +   + A+    KAI +D     AY   G I   + + E A+  FNKA+ L
Sbjct: 62  NRGLIYYYQK-KYELALADFNKAIELDSKLAIAYSNRGNIYSDQQKYELALADFNKAIEL 120

Query: 344 ARDEAELSHIYSLRDAAIAQMKVCERYNIKKKVSPRSQNITKNEKLAIKQLRENNDIIIR 403
              +++L+  YS R       +  E       ++  ++ I  + KLA             
Sbjct: 121 ---DSKLAEAYSNRGRFYYYQQKYEL-----ALADFNKAIELDSKLA------------- 159

Query: 404 PADKGGKTVVMDKADYTQKMTSILNSNDYEIIPGDPTKTIEESEKYGNLENESGQ-KHAA 462
                          Y+ +     +   YE+   D  K IE   K     +  G+  +  
Sbjct: 160 -------------GAYSNRGNIYSDQQKYELALADFNKAIELDSKLAMAYSNRGRFYYYQ 206

Query: 463 SDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQ 522
             +  A AD+++A ++D  +A +Y  RG IY L  + E AL + +K I L+     A   
Sbjct: 207 QKYELALADINKAIELDSKLAMAYSNRGGIYSLQQKDELALADFNKAIELDSKLAEAYYN 266

Query: 523 RHFVWTSTLAELMAFSD 539
           R  ++       +A SD
Sbjct: 267 RGNLYRLQQKYELALSD 283



 Score = 52.4 bits (124), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 55/240 (22%), Positives = 110/240 (45%), Gaps = 24/240 (10%)

Query: 50  ELTNGDTNESHELDLLSKAKRAF--------EHEDYLTAIRHCTEEIESTSSNHTKALAR 101
           EL   D N++ ELD  SK   A+        + + Y  A+    + IE  S     A+A 
Sbjct: 142 ELALADFNKAIELD--SKLAGAYSNRGNIYSDQQKYELALADFNKAIELDS---KLAMAY 196

Query: 102 LLRATVYIFTSQSTKAIEDLTQLVEDTSVDPKIKVNAHIKRAVVHLHAASDFTKAFADLD 161
             R   Y +  +   A+ D+ + +E   +D K+ +    +  +  L    +   A AD +
Sbjct: 197 SNRGRFYYYQQKYELALADINKAIE---LDSKLAMAYSNRGGIYSLQQKDEL--ALADFN 251

Query: 162 EAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQRHFVVHKMIVP 221
           +A ++D  +A++YY RG +Y L  +YE AL + +K I LN N   A      ++   +V 
Sbjct: 252 KAIELDSKLAEAYYNRGNLYRLQQKYELALSDYNKAIKLNKNAWFA------MMGIGLVK 305

Query: 222 GDRERVEQSLKEFRNFVDTHSNVVEACTLFAQVLVDQEDFDGAEEYFNRSIRVDPENASL 281
            ++  + +++K+++  +  ++   E     A     Q + D A +    ++ ++ + A++
Sbjct: 306 YEQGSISEAIKQWKKALIINNQSAEIQLALAVAFYHQGEKDKALKLAESALSINSQLANI 365


>gi|427739179|ref|YP_007058723.1| trypsin-like serine protease with C-terminal PDZ domain [Rivularia
           sp. PCC 7116]
 gi|427374220|gb|AFY58176.1| trypsin-like serine protease with C-terminal PDZ domain [Rivularia
           sp. PCC 7116]
          Length = 1024

 Score = 76.3 bits (186), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 85/363 (23%), Positives = 167/363 (46%), Gaps = 52/363 (14%)

Query: 154 TKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQRHF 213
           ++A   +D A +  P+   ++Y RG    + G  +++L++ +K I++ P F  A   R F
Sbjct: 555 SEAIKAVDRAIQNKPDFYQAWYLRG---LMNGLDKKSLKDFEKAISIEPKFTPAWRIRGF 611

Query: 214 VVHKMIVPGDRERVEQSLKEFRNFVDTHSNVVEACTLFAQVLVDQEDFDGAEEYFNRSI- 272
            +  +      ++  ++L  F   V   S  V A T  + +L+ Q +F  A +  N +  
Sbjct: 612 TLFHL------DQYPEALSSFEQLVKIDSKDVSANTFRSLILLSQGNFTEALDIANLAFA 665

Query: 273 -RVDPENASLYVHRAMLMLQARGNVDEAIKLIEKAISIDKSCM--FAYETLGTIEVQRGR 329
              +P+ A +Y+ RA  ++ A G+   A+  +++A+ ++   M  + Y T G +  Q+G 
Sbjct: 666 NSRNPD-AWMYLVRAFALV-ANGDSKRAMANLDEAVRLNPEFMKGYVYSTRGNLRSQQGD 723

Query: 330 LEEAVKCFNKALPLARDEAELSHIYSLRDAAIAQMKVCERYNIKKKVSPRSQNITKNEKL 389
           L+ A+  FN+A+    ++ +                      +KK+   RSQ   K+ K 
Sbjct: 724 LKGALADFNEAVLFEPEKVDY---------------------LKKRADIRSQ--LKDYKG 760

Query: 390 AIKQLRENNDIIIRPADKGGKTVVM--DKADYTQKMTSILNSNDYEIIPGDPTKTIEESE 447
           AI    E   +  + +D   K +V+  ++ D+   +T +      + I  +P K I+  +
Sbjct: 761 AIADYTEAVRLNPKDSDAIKKLLVIRIEQKDFNGAITDL-----NKFISLNP-KNIDAIK 814

Query: 448 KYGNLENESGQKHAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLD 507
             G +      + A  D+  A AD +E  ++ P+ +DSYY RGQ       Y+ A+ N +
Sbjct: 815 ARGVV------RFAQKDYENALADFNEVIRLKPDDSDSYYYRGQTLTQLNNYQAAVENYN 868

Query: 508 KTI 510
           + +
Sbjct: 869 QIL 871



 Score = 51.2 bits (121), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 43/142 (30%), Positives = 70/142 (49%), Gaps = 9/142 (6%)

Query: 58  ESHELDLLSK-AKRAFEHEDYLTAIRHCTEEIESTSSNHTKALARLLRATVYIFTSQSTK 116
           E  ++D L K A    + +DY  AI   TE +   +   + A+ +LL   + I       
Sbjct: 738 EPEKVDYLKKRADIRSQLKDYKGAIADYTEAVR-LNPKDSDAIKKLL--VIRIEQKDFNG 794

Query: 117 AIEDLTQLVEDTSVDPKIKVNAHIKRAVVHLHAASDFTKAFADLDEAEKVDPNVADSYYQ 176
           AI DL + +   S++PK  ++A   R VV   A  D+  A AD +E  ++ P+ +DSYY 
Sbjct: 795 AITDLNKFI---SLNPK-NIDAIKARGVVRF-AQKDYENALADFNEVIRLKPDDSDSYYY 849

Query: 177 RGQIYCLFGQYEEALRNLDKTI 198
           RGQ       Y+ A+ N ++ +
Sbjct: 850 RGQTLTQLNNYQAAVENYNQIL 871


>gi|386828172|ref|ZP_10115279.1| tetratricopeptide repeat protein [Beggiatoa alba B18LD]
 gi|386429056|gb|EIJ42884.1| tetratricopeptide repeat protein [Beggiatoa alba B18LD]
          Length = 613

 Score = 76.3 bits (186), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 103/453 (22%), Positives = 188/453 (41%), Gaps = 50/453 (11%)

Query: 98  ALARLLRATVYIFTSQSTKAIEDLTQLVEDTSVDPKIKVNAHIKRAVVHLHAASDFTKAF 157
           A A L R +  I  S+  +AIE   ++++    +P    +A ++R    L   + +  A 
Sbjct: 23  AEAWLQRGSALIALSRYEEAIECFDKVIQLQPNNP----DAWLQRGFA-LGVLTHYQAAT 77

Query: 158 ADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQRHFVVHK 217
            + D+  K+  +   ++   G    +   YE AL + DK I L PN   A   R F +  
Sbjct: 78  ENFDKTVKLQADNTKAWDYNGVTRIVLSHYERALEDSDKIIQLQPNNATAWLDRGFAL-- 135

Query: 218 MIVPGDRERVEQSLKEFRNFVD-----------------THSNVVEACTLFAQVLVDQED 260
               G   R E++++ F   +                  T ++  EA   F +    Q D
Sbjct: 136 ----GALNRYEEAIESFNKVIKLQIDNADAWEESRVALATLTHYEEALENFNKAYQLQSD 191

Query: 261 ----FDGAE----------EYFNRSIRVDPENASLYVHRAMLMLQARGNVDEAIKLIEKA 306
               +D A           E F++ I++ P+NA  ++ R +  L+A    ++AI+  +K 
Sbjct: 192 NTERWDIALATLTHYKEELETFDKVIQLQPDNAEAWLGRGV-ALRALTRDEDAIEAFDKV 250

Query: 307 ISIDKSCMFAYETLGTIEVQRGRLEEAVKCFNKALPLARDEAEL--SHIYSLRDAAIAQM 364
           I +      A+   G       R EEA++ F+K + L  D AE   +  Y+L +A     
Sbjct: 251 IQLQPDNAEAWHNRGNALSILTRYEEAIETFDKVIQLQPDNAETWNNQGYAL-NALTRYE 309

Query: 365 KVCERYNIKKKVSPRSQNITKNEKLAIKQLRENNDIIIRPADKGGKTVVMDKADYTQKMT 424
           +  + +N   ++ P +  I  N  +A+  L    + I    DK  +        ++ +  
Sbjct: 310 EAIKAFNKAVQLQPDNAEIWFNRGIALSNLARYQEAI-ESYDKAIQFKPDLATAWSSRGV 368

Query: 425 SILNSNDYEIIPGDPTKTIEESEKYGNLENESGQ--KHAASDFTKAFADLDEAEKVDPNV 482
           ++ +S  YE       K I+ +    N     G   +H    + +A    D+A +  P+ 
Sbjct: 369 ALFHSARYEEAIESCDKAIQFNPDLANAWYNRGLALRHLVR-YEEAIESYDKAIECKPDF 427

Query: 483 ADSYYQRGQIYCLFGQYEEALRNLDKTIALNPN 515
           AD++  RG +     +Y+E++ + DK I L PN
Sbjct: 428 ADAWNNRGIVLNYLARYKESVESFDKVIQLKPN 460



 Score = 74.3 bits (181), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 87/377 (23%), Positives = 156/377 (41%), Gaps = 35/377 (9%)

Query: 160 LDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQRHFVVHKMI 219
           LD+  ++ P+ A+++ QRG       +YEEA+   DK I L PN   A  QR F +    
Sbjct: 12  LDKVIQLQPDNAEAWLQRGSALIALSRYEEAIECFDKVIQLQPNNPDAWLQRGFAL---- 67

Query: 220 VPGDRERVEQSLKEFRNFVDTHSNVVEACTLFAQVLVDQEDFDGAEEYFNRSIRVDPENA 279
             G     + + + F   V   ++  +A        +    ++ A E  ++ I++ P NA
Sbjct: 68  --GVLTHYQAATENFDKTVKLQADNTKAWDYNGVTRIVLSHYERALEDSDKIIQLQPNNA 125

Query: 280 SLYVHRAMLMLQARGNVDEAIKLIEKAISIDKSCMFAYETLGTIEVQRGRLEEAVKCFNK 339
           + ++ R    L A    +EAI+   K I +      A+E            EEA++ FNK
Sbjct: 126 TAWLDRG-FALGALNRYEEAIESFNKVIKLQIDNADAWEESRVALATLTHYEEALENFNK 184

Query: 340 ALPLARDEAELSHIYSLRDAAIAQM----KVCERYNIKKKVSPRSQNITKNEKLAIKQLR 395
           A  L  D  E        D A+A +    +  E ++   ++ P +        +A++ L 
Sbjct: 185 AYQLQSDNTE------RWDIALATLTHYKEELETFDKVIQLQPDNAEAWLGRGVALRALT 238

Query: 396 ENNDIIIRPADKGGKTVVMDKADYTQKM------TSILNSNDYEIIPGDPTKTIEESEKY 449
            + D I     +    V+  + D  +         SIL   +  I   D    ++     
Sbjct: 239 RDEDAI-----EAFDKVIQLQPDNAEAWHNRGNALSILTRYEEAIETFDKVIQLQPD--- 290

Query: 450 GNLENESGQKHAASDFTK---AFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNL 506
            N E  + Q +A +  T+   A    ++A ++ P+ A+ ++ RG       +Y+EA+ + 
Sbjct: 291 -NAETWNNQGYALNALTRYEEAIKAFNKAVQLQPDNAEIWFNRGIALSNLARYQEAIESY 349

Query: 507 DKTIALNPNFHVARAQR 523
           DK I   P+   A + R
Sbjct: 350 DKAIQFKPDLATAWSSR 366



 Score = 49.7 bits (117), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 46/229 (20%), Positives = 106/229 (46%), Gaps = 10/229 (4%)

Query: 153 FTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQRH 212
           + +A    D+  ++ P+ A+++  +G       +YEEA++  +K + L P+     A+  
Sbjct: 274 YEEAIETFDKVIQLQPDNAETWNNQGYALNALTRYEEAIKAFNKAVQLQPD----NAEIW 329

Query: 213 FVVHKMIVPGDRERVEQSLKEFRNFVDTHSNVVEACTLFAQVLVDQEDFDGAEEYFNRSI 272
           F  ++ I   +  R +++++ +   +    ++  A +     L     ++ A E  +++I
Sbjct: 330 F--NRGIALSNLARYQEAIESYDKAIQFKPDLATAWSSRGVALFHSARYEEAIESCDKAI 387

Query: 273 RVDPENASLYVHRAMLMLQARGNVDEAIKLIEKAISIDKSCMFAYETLGTIEVQRGRLEE 332
           + +P+ A+ + +R  L L+     +EAI+  +KAI        A+   G +     R +E
Sbjct: 388 QFNPDLANAWYNRG-LALRHLVRYEEAIESYDKAIECKPDFADAWNNRGIVLNYLARYKE 446

Query: 333 AVKCFNKALPLARDEAELSHIYSL---RDAAIAQMKVCERYNIKKKVSP 378
           +V+ F+K + L  ++A     Y +   R + +   K+ E +     + P
Sbjct: 447 SVESFDKVIQLKPNDALAWSNYGVSLWRLSGLPTTKIAEVFARALAIQP 495



 Score = 42.4 bits (98), Expect = 0.59,   Method: Compositional matrix adjust.
 Identities = 21/54 (38%), Positives = 30/54 (55%)

Query: 472 LDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQRHF 525
           LD+  ++ P+ A+++ QRG       +YEEA+   DK I L PN   A  QR F
Sbjct: 12  LDKVIQLQPDNAEAWLQRGSALIALSRYEEAIECFDKVIQLQPNNPDAWLQRGF 65


>gi|300870120|ref|YP_003784991.1| hypothetical protein BP951000_0487 [Brachyspira pilosicoli 95/1000]
 gi|300687819|gb|ADK30490.1| tetratricopeptide repeat family protein [Brachyspira pilosicoli
           95/1000]
          Length = 420

 Score = 75.9 bits (185), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 92/355 (25%), Positives = 148/355 (41%), Gaps = 56/355 (15%)

Query: 174 YYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQRHFVVHKMIVPGDRERVEQSLKE 233
           Y  +G      G+Y EA++  D+ I LNPN   A   +     K+ +      ++++++E
Sbjct: 101 YNSKGIYKSANGEYAEAIKYYDEAIKLNPNMADAYYNKAIAKTKLGL------LKEAIEE 154

Query: 234 FRNFVDTHSNVVEACTLFAQVLVDQEDFDGAEEYFNRSIRVDPENASLYVHRAMLMLQAR 293
           +   ++  ++   A                   Y+NR                 L+    
Sbjct: 155 YDKAIELRADYTYA-------------------YYNRG----------------LLKSDL 179

Query: 294 GNVDEAIKLIEKAISIDKSCMFAYETLGTIEVQRGRLEEAVKCFNKALPLARDEAELSHI 353
           G ++EAIK  +KA+SID +   AY   G +E + G  +EA+K FNKA+ L  + A     
Sbjct: 180 GLLEEAIKDFDKALSIDPNLFDAYNNKGLLEDELGFSKEAIKDFNKAIKLNPNYA---LA 236

Query: 354 YSLRDAAIAQMKVCER----YNIKKKVSPR---SQNITKNEKLAIKQLRENNDIIIRPAD 406
           Y+ R  A   + + E     YN   K++P    + N   N K  +    E     I   D
Sbjct: 237 YNNRGTAKDNLGLYEEAIKDYNKAIKLNPNYALAYNNRGNAKDNLGLYEE----AIEDFD 292

Query: 407 KGGKTVVMDKADYTQKMTSILNSNDYEIIPGDPTKTIEESEKYGNLENESGQ-KHAASDF 465
           K  K    +   Y  +  +  N   YE    D  KTI+ +  Y    N  G  K     +
Sbjct: 293 KAIKLKPDNTDAYNNRGNAKYNLELYEEAIKDYDKTIKLNPNYAFAYNNRGNAKDNLGLY 352

Query: 466 TKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVAR 520
            +A  D D+A K++P+  D+Y  RG      G YEEA ++  K + L+P+   AR
Sbjct: 353 EEAIEDFDKAIKLNPDYVDAYNNRGFTKENLGLYEEAFKDYKKALELDPSNECAR 407



 Score = 72.8 bits (177), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 83/322 (25%), Positives = 137/322 (42%), Gaps = 57/322 (17%)

Query: 210 QRHFVVH-KMIVPGDRERVEQSLKEFRNFVDTHSNVV--EACTLFAQVLVDQEDFDGAEE 266
           ++HF+V    IV  ++E     L    ++ D +S  +   A   +A+ +          +
Sbjct: 70  KKHFIVSFTNIVDNNKEVDIDRLNNLTDYHDYNSKGIYKSANGEYAEAI----------K 119

Query: 267 YFNRSIRVDPENASLYVHRAMLMLQARGNVDEAIKLIEKAISIDKSCMFAYETLGTIEVQ 326
           Y++ +I+++P  A  Y ++A+   +  G + EAI+  +KAI +     +AY   G ++  
Sbjct: 120 YYDEAIKLNPNMADAYYNKAIAKTKL-GLLKEAIEEYDKAIELRADYTYAYYNRGLLKSD 178

Query: 327 RGRLEEAVKCFNKALPLARDEAELSHIYS----LRDAAIAQMKVCERYNIKKKVSPRSQN 382
            G LEEA+K F+KAL +   +  L   Y+    L D      +  + +N   K++P    
Sbjct: 179 LGLLEEAIKDFDKALSI---DPNLFDAYNNKGLLEDELGFSKEAIKDFNKAIKLNP---- 231

Query: 383 ITKNEKLAIKQLRENNDIIIRPADKGGKTVVMDKADYTQKMTSILNSNDYEIIPGDPTKT 442
              N  LA                            Y  + T+  N   YE    D  K 
Sbjct: 232 ---NYALA----------------------------YNNRGTAKDNLGLYEEAIKDYNKA 260

Query: 443 IEESEKYGNLENESGQ-KHAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEE 501
           I+ +  Y    N  G  K     + +A  D D+A K+ P+  D+Y  RG        YEE
Sbjct: 261 IKLNPNYALAYNNRGNAKDNLGLYEEAIEDFDKAIKLKPDNTDAYNNRGNAKYNLELYEE 320

Query: 502 ALRNLDKTIALNPNFHVARAQR 523
           A+++ DKTI LNPN+  A   R
Sbjct: 321 AIKDYDKTIKLNPNYAFAYNNR 342



 Score = 72.8 bits (177), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 64/234 (27%), Positives = 108/234 (46%), Gaps = 54/234 (23%)

Query: 117 AIEDLTQLVEDTSVDPKIKVNAHIKRAVVHLHAASDFTK-AFADLDEAEKVDPNVADSYY 175
           AI+D  + +   S+DP +  +A+  + ++       F+K A  D ++A K++PN A +Y 
Sbjct: 185 AIKDFDKAL---SIDPNL-FDAYNNKGLLEDELG--FSKEAIKDFNKAIKLNPNYALAYN 238

Query: 176 QRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQRHFVVHKMIVPGDRERVEQSLKEFR 235
            RG      G YEEA+++ +K I LNPN+ +A   R                        
Sbjct: 239 NRGTAKDNLGLYEEAIKDYNKAIKLNPNYALAYNNR------------------------ 274

Query: 236 NFVDTHSNVVEACTLFAQVLVDQEDFDGAEEYFNRSIRVDPENASLYVHRAMLMLQARGN 295
                  N  +   L+ + +   EDFD       ++I++ P+N   Y +R      A+ N
Sbjct: 275 ------GNAKDNLGLYEEAI---EDFD-------KAIKLKPDNTDAYNNRG----NAKYN 314

Query: 296 V---DEAIKLIEKAISIDKSCMFAYETLGTIEVQRGRLEEAVKCFNKALPLARD 346
           +   +EAIK  +K I ++ +  FAY   G  +   G  EEA++ F+KA+ L  D
Sbjct: 315 LELYEEAIKDYDKTIKLNPNYAFAYNNRGNAKDNLGLYEEAIEDFDKAIKLNPD 368



 Score = 53.9 bits (128), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 51/199 (25%), Positives = 83/199 (41%), Gaps = 45/199 (22%)

Query: 134 IKVNAHIKRAVVHLHAASD----FTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEE 189
           IK+N +   A  +   A D    + +A  D D+A K+ P+  D+Y  RG        YEE
Sbjct: 261 IKLNPNYALAYNNRGNAKDNLGLYEEAIEDFDKAIKLKPDNTDAYNNRGNAKYNLELYEE 320

Query: 190 ALRNLDKTIALNPNFHVARAQRHFVVHKMIVPGDRERVEQSLKEFRNFVDTHSNVVEACT 249
           A+++ DKTI LNPN+  A   R                               N  +   
Sbjct: 321 AIKDYDKTIKLNPNYAFAYNNR------------------------------GNAKDNLG 350

Query: 250 LFAQVLVDQEDFDGAEEYFNRSIRVDPENASLYVHRAMLMLQARGNVDEAIKLIEKAISI 309
           L+ + +   EDFD       ++I+++P+    Y +R     +  G  +EA K  +KA+ +
Sbjct: 351 LYEEAI---EDFD-------KAIKLNPDYVDAYNNRGFTK-ENLGLYEEAFKDYKKALEL 399

Query: 310 DKSCMFAYETLGTIEVQRG 328
           D S   A E +   + + G
Sbjct: 400 DPSNECARENVKRTKEEHG 418



 Score = 42.0 bits (97), Expect = 0.87,   Method: Compositional matrix adjust.
 Identities = 27/82 (32%), Positives = 42/82 (51%), Gaps = 4/82 (4%)

Query: 131 DPKIKVNAHIKRAVVHLHAASD----FTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQ 186
           D  IK+N +   A  +   A D    + +A  D D+A K++P+  D+Y  RG      G 
Sbjct: 326 DKTIKLNPNYAFAYNNRGNAKDNLGLYEEAIEDFDKAIKLNPDYVDAYNNRGFTKENLGL 385

Query: 187 YEEALRNLDKTIALNPNFHVAR 208
           YEEA ++  K + L+P+   AR
Sbjct: 386 YEEAFKDYKKALELDPSNECAR 407


>gi|167518676|ref|XP_001743678.1| hypothetical protein [Monosiga brevicollis MX1]
 gi|163777640|gb|EDQ91256.1| predicted protein [Monosiga brevicollis MX1]
          Length = 609

 Score = 75.9 bits (185), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 63/233 (27%), Positives = 116/233 (49%), Gaps = 14/233 (6%)

Query: 140 IKRAVVHLHAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIA 199
           I+RA V L       +A AD ++A  V      ++  RGQ++   G+  EA  + +K IA
Sbjct: 373 IRRATVLLEKGR-APEAIADAEKA--VATGNPFAFICRGQVHAQTGRQAEAFADFEKAIA 429

Query: 200 LNPNFHVARAQRHFVVHKMIV--PGDRERVEQSLKEFRNFVDTHSNVVEACTLFAQVLVD 257
           +  N        H V+  +        + ++ +L++F +    H           +VL++
Sbjct: 430 MEKNTSYI-PYIHVVLKALQTDPAAAGQLLDSALEKFSDVAIMHQ-------FKGEVLMN 481

Query: 258 QEDFDGAEEYFNRSIRVDPENASLYVHRAMLMLQARGNVDEAIKLIEKAISIDKSCMFAY 317
                 AE+ F++++ VDP++ +  V++ M+++Q +G + E  +LIE+A+ ID  C  AY
Sbjct: 482 LGQLAAAEQAFDQALTVDPDSPNAIVNKGMVLIQ-QGKLREGQELIEQALKIDPLCEAAY 540

Query: 318 ETLGTIEVQRGRLEEAVKCFNKALPLARDEAELSHIYSLRDAAIAQMKVCERY 370
             L  +E+Q+   ++AV+ + KA+  A    E+  +   R+AA AQ  V   Y
Sbjct: 541 ARLAELEMQKQNGKKAVEYYQKAIDCASVPGEIQQLLQHREAAYAQDYVVTTY 593


>gi|291445477|ref|ZP_06584867.1| TPR repeat-containing protein [Streptomyces roseosporus NRRL 15998]
 gi|291348424|gb|EFE75328.1| TPR repeat-containing protein [Streptomyces roseosporus NRRL 15998]
          Length = 424

 Score = 75.5 bits (184), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 70/251 (27%), Positives = 116/251 (46%), Gaps = 12/251 (4%)

Query: 93  SNHTKALARLLRATVYIFTSQSTKAIEDLTQLVEDTSVDPKIKVNAHIKRAVVHLHAASD 152
           ++  +A A + RA       +   A+ D  + V   +VDP+ +  AH  RAV+ L +   
Sbjct: 166 TDRDRAAALVARAWDRFRAGELDAALSDHGRAV---AVDPRSE-RAHQGRAVI-LRSLGR 220

Query: 153 FTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQRH 212
             +A ADLD AE++ P  A +  +RG+ Y   G+ EEAL  LD+  AL+P+  V    R 
Sbjct: 221 HEEALADLDRAEEIAPAWAWAVRERGETYRRMGRLEEALTVLDRAHALDPSDAVPLGSRG 280

Query: 213 FVVHKMIVPGDRERVEQSLKEFRNFVDTHSNVVEACTLFAQVLVDQEDFDGAEEYFNRSI 272
            V H +       R E++L +F   +        A    ++V     D  GA    +R+ 
Sbjct: 281 LVRHAL------GRHEEALDDFDRAIALWPEYAWALVRRSRVRTVLGDPVGALADLDRAE 334

Query: 273 RVDPENASLYVHRAMLMLQARGNVDEAIKLIEKAISIDKSCMFAYETLGTIEVQRGRLEE 332
            ++P  A     R  +  +A G  +EA+    +A+++D    +A+ +        GRL E
Sbjct: 335 ELNPGRAGTEGERGEVY-RATGRHEEAVACYGRALALDPEYAWAHGSRALALEALGRLPE 393

Query: 333 AVKCFNKALPL 343
           A    ++AL L
Sbjct: 394 ARADLDRALEL 404



 Score = 48.1 bits (113), Expect = 0.012,   Method: Compositional matrix adjust.
 Identities = 22/64 (34%), Positives = 36/64 (56%)

Query: 463 SDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQ 522
            D   A ADLD AE+++P  A +  +RG++Y   G++EEA+    + +AL+P +  A   
Sbjct: 321 GDPVGALADLDRAEELNPGRAGTEGERGEVYRATGRHEEAVACYGRALALDPEYAWAHGS 380

Query: 523 RHFV 526
           R   
Sbjct: 381 RALA 384



 Score = 47.0 bits (110), Expect = 0.024,   Method: Compositional matrix adjust.
 Identities = 25/60 (41%), Positives = 35/60 (58%)

Query: 467 KAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQRHFV 526
           +A ADLD AE++ P  A +  +RG+ Y   G+ EEAL  LD+  AL+P+  V    R  V
Sbjct: 223 EALADLDRAEEIAPAWAWAVRERGETYRRMGRLEEALTVLDRAHALDPSDAVPLGSRGLV 282


>gi|146422961|ref|XP_001487414.1| hypothetical protein PGUG_00791 [Meyerozyma guilliermondii ATCC
           6260]
 gi|146388535|gb|EDK36693.1| hypothetical protein PGUG_00791 [Meyerozyma guilliermondii ATCC
           6260]
          Length = 599

 Score = 75.5 bits (184), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 64/239 (26%), Positives = 111/239 (46%), Gaps = 14/239 (5%)

Query: 135 KVNAHIKRAVVHLHAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNL 194
           +   ++ RA++    AS F +A  D   A  +DP   D +YQ GQ+Y L G  E+A  N 
Sbjct: 345 RARTYVFRALISADKAS-FGEALQDFSTAAAMDPKSPDVFYQLGQLYYLTGDLEKAKDNF 403

Query: 195 DKTIALNPNFHVARAQRHFVVHKMIVPGDRERVEQSLKEFRNFVDTHSNVVEACTLFAQV 254
            K + LNPN   A  Q   + +K         V+++ ++F       +   E    F ++
Sbjct: 404 TKAMELNPNNVYAHIQLACITYK------NGAVKEAEEKFTQAKLKFTTSPEVPNYFGEI 457

Query: 255 LVDQEDFDGAEEYFNRSIRVDPE------NASLYVHRAMLM-LQARGNVDEAIKLIEKAI 307
           L D+ + D A + F  S R+          A   +++A L+  ++   +DEA +L+  A 
Sbjct: 458 LADRGEMDLACKQFEISARLQEALPTYSVGALPLINKASLISRESMERIDEAEELLTTAC 517

Query: 308 SIDKSCMFAYETLGTIEVQRGRLEEAVKCFNKALPLARDEAELSHIYSLRDAAIAQMKV 366
           ++D     A  TL  I++Q+  ++EA+  F ++  LAR   E     S  +A   Q ++
Sbjct: 518 ALDPKSELARITLAQIKLQKEDVDEAIVLFEESSKLARSIEEKVQATSFAEATKMQRRI 576



 Score = 47.4 bits (111), Expect = 0.020,   Method: Compositional matrix adjust.
 Identities = 22/53 (41%), Positives = 29/53 (54%)

Query: 463 SDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPN 515
           + F +A  D   A  +DP   D +YQ GQ+Y L G  E+A  N  K + LNPN
Sbjct: 360 ASFGEALQDFSTAAAMDPKSPDVFYQLGQLYYLTGDLEKAKDNFTKAMELNPN 412


>gi|429123131|ref|ZP_19183664.1| hypothetical protein A966_02421 [Brachyspira hampsonii 30446]
 gi|426280944|gb|EKV57947.1| hypothetical protein A966_02421 [Brachyspira hampsonii 30446]
          Length = 392

 Score = 75.5 bits (184), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 79/325 (24%), Positives = 144/325 (44%), Gaps = 54/325 (16%)

Query: 63  DLLSKAKRAFEHEDYLTAIRHCTEEIESTSSNHTKALARLLRATVYIFTSQSTK-AIEDL 121
           +  +KA  AF++++Y  AI + +E I+  S+ +     R   A   I    S K AIED 
Sbjct: 8   NFFNKAYDAFKNKNYNLAIEYFSEVIKLDSTIYEAYYNRA-NAKANIDNENSYKSAIEDY 66

Query: 122 TQLV-----------------------EDT--SVDPKIKVNAHIKRAVVHLHAAS----- 151
           T  +                       ED     D  I++N +++ A  ++ A +     
Sbjct: 67  TWALKLNDKFAAAYYNRGIMNRSLGNTEDALKDFDKAIELNYNLEEAY-YVRANTKASLK 125

Query: 152 DFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQR 211
           D+  +  D ++A +V P+ AD+YY R       G+Y+EA+++ DK I  N +F  A    
Sbjct: 126 DYKGSIEDYNKAIEVYPHFADAYYNRALSKNALGEYKEAIKDYDKAIEYNSHFTDAY--- 182

Query: 212 HFVVHKMIVPGDRERVEQSLKEFRNFVDTHSNVVEACTLFAQVLVDQ-------EDFDGA 264
                      +R  V++ L  +   +D ++N +     FA    ++       +D+ GA
Sbjct: 183 ----------NNRGNVKEKLGNYNEAIDDYTNAIHINREFADGYFNRANAKFHIKDYKGA 232

Query: 265 EEYFNRSIRVDPENASLYVHRAMLMLQARGNVDEAIKLIEKAISIDKSCMFAYETLGTIE 324
            E F+  I++DP  +  Y++R ++ +       EAIK  +K I +D +   AY       
Sbjct: 233 VEDFDELIKIDPNYSKAYLNRGIIAITMEA-YQEAIKDFDKVIELDPNIADAYYNKAVAL 291

Query: 325 VQRGRLEEAVKCFNKALPLARDEAE 349
              G  +E++  +++A+ L  D +E
Sbjct: 292 NHLGIYDESILYYDQAIKLNPDYSE 316



 Score = 69.3 bits (168), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 72/274 (26%), Positives = 119/274 (43%), Gaps = 29/274 (10%)

Query: 258 QEDFDGAEEYFNRSIRVDPENASLYVHRAMLMLQARGNVDE------AIKLIEKAISIDK 311
            ++++ A EYF+  I++D      Y +RA     A+ N+D       AI+    A+ ++ 
Sbjct: 19  NKNYNLAIEYFSEVIKLDSTIYEAYYNRA----NAKANIDNENSYKSAIEDYTWALKLND 74

Query: 312 SCMFAYETLGTIEVQRGRLEEAVKCFNKALPLARDEAELSHIYSLRDAAIAQMK-VCERY 370
               AY   G +    G  E+A+K F+KA+ L  +  E  ++ +   A++   K   E Y
Sbjct: 75  KFAAAYYNRGIMNRSLGNTEDALKDFDKAIELNYNLEEAYYVRANTKASLKDYKGSIEDY 134

Query: 371 NIKKKVSPRSQNITKNEKLAIKQLRENNDIIIRPADKGGKTVVMDKADYTQKMTSILNS- 429
           N   +V P   +   N  L+   L E  + I +  DK          +Y    T   N+ 
Sbjct: 135 NKAIEVYPHFADAYYNRALSKNALGEYKEAI-KDYDKA--------IEYNSHFTDAYNNR 185

Query: 430 -------NDYEIIPGDPTKTIEESEKYGN-LENESGQKHAASDFTKAFADLDEAEKVDPN 481
                   +Y     D T  I  + ++ +   N +  K    D+  A  D DE  K+DPN
Sbjct: 186 GNVKEKLGNYNEAIDDYTNAIHINREFADGYFNRANAKFHIKDYKGAVEDFDELIKIDPN 245

Query: 482 VADSYYQRGQIYCLFGQYEEALRNLDKTIALNPN 515
            + +Y  RG I      Y+EA+++ DK I L+PN
Sbjct: 246 YSKAYLNRGIIAITMEAYQEAIKDFDKVIELDPN 279



 Score = 42.7 bits (99), Expect = 0.49,   Method: Compositional matrix adjust.
 Identities = 29/85 (34%), Positives = 43/85 (50%), Gaps = 11/85 (12%)

Query: 450 GNLENESGQKHAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKT 509
            N++NE+  K A  D+T A        K++   A +YY RG +    G  E+AL++ DK 
Sbjct: 51  ANIDNENSYKSAIEDYTWAL-------KLNDKFAAAYYNRGIMNRSLGNTEDALKDFDKA 103

Query: 510 IALNPNFHVARAQRHFVWTSTLAEL 534
           I LN N   A    ++V  +T A L
Sbjct: 104 IELNYNLEEA----YYVRANTKASL 124


>gi|330508351|ref|YP_004384779.1| TPR-repeat-containing protein [Methanosaeta concilii GP6]
 gi|328929159|gb|AEB68961.1| TPR-repeat protein [Methanosaeta concilii GP6]
          Length = 440

 Score = 75.5 bits (184), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 76/357 (21%), Positives = 161/357 (45%), Gaps = 31/357 (8%)

Query: 172 DSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQRHFVVHKMIVPGDRERVEQSL 231
           D +YQ G      G+Y+EA++  D+ I L+P    A +      +K +   D+ + ++++
Sbjct: 26  DWFYQ-GVALADQGKYDEAIKAYDEAIRLDPTIAAAWS------NKGVAFADQGKHDEAI 78

Query: 232 KEFRNFVDTHSNVVEACTLFAQVLVDQEDFDGAEEYFNRSIRVDPENASLYVHRAMLMLQ 291
           + +   +        A       L DQ  +D A E ++ +IR+DP +A  + ++    L 
Sbjct: 79  EAYDEAIRLDPTDAAAWGNKGASLADQGKYDEAIEAYDEAIRLDPTDAIAWFNKGN-SLN 137

Query: 292 ARGNVDEAIKLIEKAISIDKSCMFAYETLGTIEVQRGRLEEAVKCFNKALPLARDEAELS 351
            +   DE+IK  ++AI ++      +   G     +G+ +EA++ +++A+ L  D A ++
Sbjct: 138 KQKKYDESIKAYDEAIGLNPVLAEPWIGKGKSLADQGKYDEAIEAYDEAIRL--DPANVA 195

Query: 352 HIYSLRDAAIAQM----KVCERYNIKKKVSPRSQNITKNEKLAIKQLRENNDIIIRPADK 407
             +  +  ++A      +  E Y+   ++ P    +  N+ +++   +  +D  I   D+
Sbjct: 196 -AWGNKGVSLADQGKYDEAIEAYDEAIRLDPTDAAVWGNKGVSLAD-QGKHDEAIEAYDE 253

Query: 408 GGKTVVMDKADYTQKMTSILNSNDY--------EIIPGDPTKTIEESEKYGNLENESGQK 459
             +    D A +  K  S+++   Y        E I  DP        K  +L ++    
Sbjct: 254 AIRLDPTDAAVWGNKGVSLVDQGKYDEAIEAYDEAIRLDPANAAAWGNKGVSLADQG--- 310

Query: 460 HAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNF 516
                + +A    DEA ++DP  A +++ +G       +Y+E+++  D+ I LNP+ 
Sbjct: 311 ----KYDEAIEAYDEAIRLDPTDATAWFNKGNSLNKQKKYDESIKAYDEAIRLNPDL 363



 Score = 70.9 bits (172), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 80/401 (19%), Positives = 175/401 (43%), Gaps = 70/401 (17%)

Query: 145 VHLHAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNF 204
           V L     + +A    DEA ++DP +A ++  +G  +   G+++EA+   D+ I L+P  
Sbjct: 32  VALADQGKYDEAIKAYDEAIRLDPTIAAAWSNKGVAFADQGKHDEAIEAYDEAIRLDPTD 91

Query: 205 HVARAQRHFVVHKM---------------IVPGD-------------RERVEQSLKEFRN 236
             A   +   +                  + P D             +++ ++S+K +  
Sbjct: 92  AAAWGNKGASLADQGKYDEAIEAYDEAIRLDPTDAIAWFNKGNSLNKQKKYDESIKAYDE 151

Query: 237 FVDTHSNVVEACTLFAQVLVDQEDFDGAEEYFNRSIRVDPENASLYVHRAMLMLQARGNV 296
            +  +  + E      + L DQ  +D A E ++ +IR+DP N + + ++  + L  +G  
Sbjct: 152 AIGLNPVLAEPWIGKGKSLADQGKYDEAIEAYDEAIRLDPANVAAWGNKG-VSLADQGKY 210

Query: 297 DEAIKLIEKAISIDKSCMFAYETLGTIEVQRGRLEEAVKCFNKALPLARDEAELSHIYSL 356
           DEAI+  ++AI +D +    +   G     +G+ +EA++ +++A+ L   +A    ++  
Sbjct: 211 DEAIEAYDEAIRLDPTDAAVWGNKGVSLADQGKHDEAIEAYDEAIRLDPTDA---AVWGN 267

Query: 357 RDAAIAQM----KVCERYNIKKKVSPRSQNITKNEKLAIKQLRENNDIIIRPADKGGKTV 412
           +  ++       +  E Y+   ++ P +     N+ +++             AD+G    
Sbjct: 268 KGVSLVDQGKYDEAIEAYDEAIRLDPANAAAWGNKGVSL-------------ADQG---- 310

Query: 413 VMDKADYTQKMTSILNSNDYEIIPGDPTKTIEESEKYGNLENESGQKHAASDFTKAFADL 472
                    K    + + D E I  DPT    ++  + N  N   ++    +  KA+   
Sbjct: 311 ---------KYDEAIEAYD-EAIRLDPT----DATAWFNKGNSLNKQKKYDESIKAY--- 353

Query: 473 DEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALN 513
           DEA +++P++A+ +  +G      G+++EA++  D+ I L+
Sbjct: 354 DEAIRLNPDLAEPWIGKGNSLDDQGKHDEAIQAYDEAIRLD 394


>gi|113477431|ref|YP_723492.1| hypothetical protein Tery_3996 [Trichodesmium erythraeum IMS101]
 gi|110168479|gb|ABG53019.1| Tetratricopeptide TPR_2 [Trichodesmium erythraeum IMS101]
          Length = 1694

 Score = 75.5 bits (184), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 80/376 (21%), Positives = 165/376 (43%), Gaps = 24/376 (6%)

Query: 153 FTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQRH 212
           + +A A  ++A ++ P+  D+++ +G       +YEEA+   +K + + P+FH A     
Sbjct: 514 YEEAVAAYEKALEIKPDFHDAWFLKGNALGNLERYEEAVAAYEKALEIKPDFHEA----W 569

Query: 213 FVVHKMIVPGDRERVEQSLKEFRNFVDTHSNVVEACTLFAQVLVDQEDFDGAEEYFNRSI 272
           F+    +  G+ ER E+++  +   ++   +  EA  L    L + E ++ A   + +++
Sbjct: 570 FLKGNAL--GNLERYEEAVAAYEKALEIKPDFHEAWFLKGNALGNLERYEEAVAAYEKAL 627

Query: 273 RVDPENASLYVHRAMLML-QARGNV---DEAIKLIEKAISIDKSCMFAYETLGTIEVQRG 328
            + P+      H A  +   A GN+   +EA+   EKA+ I     +A+   G       
Sbjct: 628 EIKPD-----FHDAWFLKGNALGNLERYEEAVAAYEKALEIKPDFHYAWFLKGNALGNLE 682

Query: 329 RLEEAVKCFNKALPLARDEAELSHIYSLRDAAIAQMKVCER----YNIKKKVSPRSQNIT 384
           R EEAV  F KAL +  D       ++ +  A+ +++  E     +    ++ P      
Sbjct: 683 RYEEAVAAFEKALEIKPD---FHEAWNNKGIALEKLERYEEAVAAFEKALEIKPDFHEAW 739

Query: 385 KNEKLAIKQLRENNDIIIRPADKGGKTVVMDKADYTQKMTSILNSNDYEIIPGDPTKTIE 444
            N+ +A+++L E  +  +   +K  +        +  K  ++     YE       K +E
Sbjct: 740 NNKGIALEKL-ERYEEAVAAFEKALEIKPDFHEAWNNKGIALEKLERYEEAVAAFEKALE 798

Query: 445 ESEKYGNLENESG-QKHAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEAL 503
               +    N  G        + +A A  ++A ++ P+  D+++ +G       +YEEA+
Sbjct: 799 IKPDFHEAWNNKGIALEKLERYEEAVAAFEKALEIKPDFHDAWFLKGNALGNLERYEEAV 858

Query: 504 RNLDKTIALNPNFHVA 519
              +K + + P+FH A
Sbjct: 859 AAYEKALEIKPDFHEA 874



 Score = 71.6 bits (174), Expect = 9e-10,   Method: Compositional matrix adjust.
 Identities = 74/390 (18%), Positives = 166/390 (42%), Gaps = 52/390 (13%)

Query: 153  FTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQRH 212
            + +A A  ++A ++ P+  ++++ +G       +YEEA+   +K + + P+FH A   + 
Sbjct: 990  YEEAVAAYEKALEIKPDFHEAWFLKGIALGKLERYEEAVAAYEKALEIKPDFHEAWHNKG 1049

Query: 213  FVVHKMIVPGDRERVEQSLKEFRNFVDTHSNVVEACTLFAQVLVDQEDFDGAEEYFNRSI 272
              +  +      ER E+++  +   ++   +  EA       L + E ++ A   + +++
Sbjct: 1050 IALENL------ERYEEAVAAYEKALEIKPDFHEAWHNKGIALENLERYEEAVAAYEKAL 1103

Query: 273  RVDPENASLYVHRAMLMLQARGNVDEAIKLIEKAISIDKSCMFAYETLGTIEVQRGRLEE 332
             + P+    + H     L+     +EA+   EKA+ I     +A+   G   ++  R EE
Sbjct: 1104 EIKPDYHYAW-HNKGDALENLERYEEAVAAYEKALEIKPDYHYAWNGKGIALIKLERYEE 1162

Query: 333  AVKCFNKALPLARDEAELSHIYSLRDAAIAQMKVCER----YNIKKKVSPRSQNITKNEK 388
            AV  F KAL +  D       + L+  A+  ++  E     +    ++ P       N+ 
Sbjct: 1163 AVAAFEKALEIKPD---FHDAWFLKGNALGNLERYEEAVAAFEKALEIKPDFHEAWNNKG 1219

Query: 389  LAIKQLRENNDII--------IRP------ADKGGKTVVMDK-----ADYTQKMTSILNS 429
            +A+++L    + +        I+P       +KG   + +++     A Y + +    + 
Sbjct: 1220 IALEKLERYEEAVAAFEKALEIKPDFHEAWHNKGNALIKLERYEEAVAAYEKALEIKPDF 1279

Query: 430  NDYEIIPGDPTKTIEESEKYGNLENESGQKHAASDFTKAFADLDEAEKVDPNVADSYYQR 489
            +D   + G+    +E  E+                   A A  ++A ++ P+  ++++ +
Sbjct: 1280 HDAWFLKGNALIKLERYEE-------------------AVAAYEKALEIKPDFHEAWFLK 1320

Query: 490  GQIYCLFGQYEEALRNLDKTIALNPNFHVA 519
            G       +YEEA+   +K + + P+FH A
Sbjct: 1321 GNALIKLERYEEAVAAYEKALEIKPDFHEA 1350



 Score = 71.2 bits (173), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 83/408 (20%), Positives = 168/408 (41%), Gaps = 54/408 (13%)

Query: 153  FTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQRH 212
            + +A A  ++A ++ P+  D+++ +G       +YEEA+   +K + + P+FH A   + 
Sbjct: 820  YEEAVAAFEKALEIKPDFHDAWFLKGNALGNLERYEEAVAAYEKALEIKPDFHEAWHNKG 879

Query: 213  FVVHKMIVPGDRERVEQSLKEFRNFVDTHSNVVEACTLFAQVLVDQEDFDGAEEYFNRSI 272
              +  +      ER E+++  +   ++   +  EA       L   E ++ A   F +++
Sbjct: 880  IALENL------ERYEEAVAAYEKALEIKPDFHEAWNNKGIALEKLERYEEAVAAFEKAL 933

Query: 273  RVDPENASLYVHRAMLMLQARGNV---DEAIKLIEKAISIDKSCMFAYETLGTIEVQRGR 329
             + P+    + ++      A GN+   +EA+   EKA+ I     +A+   G    +  R
Sbjct: 934  EIKPDFHEAWHNKG----NALGNLERYEEAVAAYEKALEIKPDFHYAWFLKGIALGKLER 989

Query: 330  LEEAVKCFNKALPLARDEAELSHIYSLRDAAIAQMKVCER----YNIKKKVSPRSQNITK 385
             EEAV  + KAL +  D       + L+  A+ +++  E     Y    ++ P       
Sbjct: 990  YEEAVAAYEKALEIKPD---FHEAWFLKGIALGKLERYEEAVAAYEKALEIKPDFHEAWH 1046

Query: 386  NEKLAIKQLRENNDII--------IRP---ADKGGKTVVMD------------------K 416
            N+ +A++ L    + +        I+P        K + ++                  K
Sbjct: 1047 NKGIALENLERYEEAVAAYEKALEIKPDFHEAWHNKGIALENLERYEEAVAAYEKALEIK 1106

Query: 417  ADY----TQKMTSILNSNDYEIIPGDPTKTIEESEKYGNLENESGQKHAASD-FTKAFAD 471
             DY      K  ++ N   YE       K +E    Y    N  G      + + +A A 
Sbjct: 1107 PDYHYAWHNKGDALENLERYEEAVAAYEKALEIKPDYHYAWNGKGIALIKLERYEEAVAA 1166

Query: 472  LDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVA 519
             ++A ++ P+  D+++ +G       +YEEA+   +K + + P+FH A
Sbjct: 1167 FEKALEIKPDFHDAWFLKGNALGNLERYEEAVAAFEKALEIKPDFHEA 1214



 Score = 70.9 bits (172), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 78/373 (20%), Positives = 160/373 (42%), Gaps = 18/373 (4%)

Query: 153  FTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQRH 212
            + +A A  ++A ++ P+  ++++ +G       +YEEA+   +K + + P+FH A     
Sbjct: 922  YEEAVAAFEKALEIKPDFHEAWHNKGNALGNLERYEEAVAAYEKALEIKPDFHYA----W 977

Query: 213  FVVHKMIVPGDRERVEQSLKEFRNFVDTHSNVVEACTLFAQVLVDQEDFDGAEEYFNRSI 272
            F+  K I  G  ER E+++  +   ++   +  EA  L    L   E ++ A   + +++
Sbjct: 978  FL--KGIALGKLERYEEAVAAYEKALEIKPDFHEAWFLKGIALGKLERYEEAVAAYEKAL 1035

Query: 273  RVDPENASLYVHRAMLMLQARGNVDEAIKLIEKAISIDKSCMFAYETLGTIEVQRGRLEE 332
             + P+    + H   + L+     +EA+   EKA+ I      A+   G       R EE
Sbjct: 1036 EIKPDFHEAW-HNKGIALENLERYEEAVAAYEKALEIKPDFHEAWHNKGIALENLERYEE 1094

Query: 333  AVKCFNKALPLARDEAELSHIYSLRDAAIAQMKVCER----YNIKKKVSPRSQNITKNEK 388
            AV  + KAL +  D     + +  +  A+  ++  E     Y    ++ P        + 
Sbjct: 1095 AVAAYEKALEIKPD---YHYAWHNKGDALENLERYEEAVAAYEKALEIKPDYHYAWNGKG 1151

Query: 389  LAIKQLRENNDIIIRPADKGGKTVVMDKAD-YTQKMTSILNSNDYEIIPGDPTKTIEESE 447
            +A+ +L    + +   A +    +  D  D +  K  ++ N   YE       K +E   
Sbjct: 1152 IALIKLERYEEAV--AAFEKALEIKPDFHDAWFLKGNALGNLERYEEAVAAFEKALEIKP 1209

Query: 448  KYGNLENESG-QKHAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNL 506
             +    N  G        + +A A  ++A ++ P+  ++++ +G       +YEEA+   
Sbjct: 1210 DFHEAWNNKGIALEKLERYEEAVAAFEKALEIKPDFHEAWHNKGNALIKLERYEEAVAAY 1269

Query: 507  DKTIALNPNFHVA 519
            +K + + P+FH A
Sbjct: 1270 EKALEIKPDFHDA 1282



 Score = 70.9 bits (172), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 81/367 (22%), Positives = 154/367 (41%), Gaps = 56/367 (15%)

Query: 161 DEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQRHFVVHKMIV 220
           DEA K++PN  +++  +G       +YEEA+   +K + + P+FH A     F+  K I 
Sbjct: 250 DEALKIEPNDYNAWNNKGSALINLERYEEAVAAYEKALEIKPDFHEA----WFL--KGIA 303

Query: 221 PGDRERVEQSLKEFRNFVDTHSNVVEACTLFAQVLVDQEDFDGAEEYFNRSIRVDPENAS 280
             + ER E+++  +   ++   +  EA  L    L++ E ++ A   + +++ + P+   
Sbjct: 304 LINLERYEEAVAAYEKALEIKPDFHEAWFLKGIALINLERYEEAVAAYEKALEIKPD--- 360

Query: 281 LYVHRAMLML-QARGNV---DEAIKLIEKAISIDKSCMFAYETLGTIEVQRGRLEEAVKC 336
              H A  +   A GN+   +EA+   EKA+ I      A+   G       R EEAV  
Sbjct: 361 --FHEAWFLKGNALGNLERYEEAVAAYEKALEIKPDFHEAWFLKGIALGNLERYEEAVAA 418

Query: 337 FNKALPLARDEAELSHIYSLRDAAIAQMKVCER----YNIKKKVSPRSQNITKNEKLAIK 392
           + KAL +  D       + L+  A+  ++  E     Y    ++ P        +  A+ 
Sbjct: 419 YEKALEIKPD---FHEAWFLKGNALGNLERYEEAVAAYEKALEIKPDFHEAWFLKGNALG 475

Query: 393 QLRENNDIIIRPADKGGKTVVMDKADYTQKMTSILNSNDYEIIPGDPTKTIEESEKYGNL 452
            L    + +               A Y + +    + +D   + G+           GNL
Sbjct: 476 NLERYEEAV---------------AAYEKALEIKPDFHDAWFLKGNAL---------GNL 511

Query: 453 ENESGQKHAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIAL 512
           E           + +A A  ++A ++ P+  D+++ +G       +YEEA+   +K + +
Sbjct: 512 ER----------YEEAVAAYEKALEIKPDFHDAWFLKGNALGNLERYEEAVAAYEKALEI 561

Query: 513 NPNFHVA 519
            P+FH A
Sbjct: 562 KPDFHEA 568



 Score = 70.1 bits (170), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 79/376 (21%), Positives = 163/376 (43%), Gaps = 24/376 (6%)

Query: 153 FTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQRH 212
           + +A A  ++A ++ P+  D+++ +G       +YEEA+   +K + + P+FH A     
Sbjct: 480 YEEAVAAYEKALEIKPDFHDAWFLKGNALGNLERYEEAVAAYEKALEIKPDFHDA----W 535

Query: 213 FVVHKMIVPGDRERVEQSLKEFRNFVDTHSNVVEACTLFAQVLVDQEDFDGAEEYFNRSI 272
           F+    +  G+ ER E+++  +   ++   +  EA  L    L + E ++ A   + +++
Sbjct: 536 FLKGNAL--GNLERYEEAVAAYEKALEIKPDFHEAWFLKGNALGNLERYEEAVAAYEKAL 593

Query: 273 RVDPENASLYVHRAMLML-QARGNV---DEAIKLIEKAISIDKSCMFAYETLGTIEVQRG 328
            + P+      H A  +   A GN+   +EA+   EKA+ I      A+   G       
Sbjct: 594 EIKPD-----FHEAWFLKGNALGNLERYEEAVAAYEKALEIKPDFHDAWFLKGNALGNLE 648

Query: 329 RLEEAVKCFNKALPLARDEAELSHIYSLRDAAIAQMKVCER----YNIKKKVSPRSQNIT 384
           R EEAV  + KAL +  D     + + L+  A+  ++  E     +    ++ P      
Sbjct: 649 RYEEAVAAYEKALEIKPD---FHYAWFLKGNALGNLERYEEAVAAFEKALEIKPDFHEAW 705

Query: 385 KNEKLAIKQLRENNDIIIRPADKGGKTVVMDKADYTQKMTSILNSNDYEIIPGDPTKTIE 444
            N+ +A+++L E  +  +   +K  +        +  K  ++     YE       K +E
Sbjct: 706 NNKGIALEKL-ERYEEAVAAFEKALEIKPDFHEAWNNKGIALEKLERYEEAVAAFEKALE 764

Query: 445 ESEKYGNLENESG-QKHAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEAL 503
               +    N  G        + +A A  ++A ++ P+  +++  +G       +YEEA+
Sbjct: 765 IKPDFHEAWNNKGIALEKLERYEEAVAAFEKALEIKPDFHEAWNNKGIALEKLERYEEAV 824

Query: 504 RNLDKTIALNPNFHVA 519
              +K + + P+FH A
Sbjct: 825 AAFEKALEIKPDFHDA 840



 Score = 69.7 bits (169), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 76/397 (19%), Positives = 167/397 (42%), Gaps = 66/397 (16%)

Query: 153  FTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQRH 212
            + +A A  ++A ++ P+  +++  +G       +YEEA+   +K + + P+FH A   + 
Sbjct: 1194 YEEAVAAFEKALEIKPDFHEAWNNKGIALEKLERYEEAVAAFEKALEIKPDFHEAWHNKG 1253

Query: 213  FVVHKMIVPGDRERVEQSLKEFRNFVDTHSNVVEACTLFAQVLVDQEDFDGAEEYFNRSI 272
              + K+      ER E+++  +   ++   +  +A  L    L+  E ++ A   + +++
Sbjct: 1254 NALIKL------ERYEEAVAAYEKALEIKPDFHDAWFLKGNALIKLERYEEAVAAYEKAL 1307

Query: 273  RVDPENASLYVHRAMLMLQARGNV-------DEAIKLIEKAISIDKSCMFAYETLGTIEV 325
             + P+      H A  +   +GN        +EA+   EKA+ I      A+   G   +
Sbjct: 1308 EIKPD-----FHEAWFL---KGNALIKLERYEEAVAAYEKALEIKPDFHEAWFLKGNALI 1359

Query: 326  QRGRLEEAVKCFNKALPLARDEAELSHIYSLRDAAIAQMKVCER----YNIKKKVSPRSQ 381
            +  R EEAV  + KAL +  D       + L+  A+  ++  E     Y    ++ P   
Sbjct: 1360 KLERYEEAVAAYEKALEIKPD---FHEAWFLKGNALGNLERYEEAVAAYEKALEIKPDFH 1416

Query: 382  NITKNEKLAIKQLRENNDII--------IRP------ADKGGKTVVMDK-----ADYTQK 422
                N+ +A+ +L    + +        I+P       +KG   + +++     A Y + 
Sbjct: 1417 EAWHNKGIALGKLERYEEAVAAFEKALEIKPDFHEAWHNKGNALIKLERYEEAVAAYEKA 1476

Query: 423  MTSILNSNDYEIIPGDPTKTIEESEKYGNLENESGQKHAASDFTKAFADLDEAEKVDPNV 482
            +    + ++   + G+    +E  E+                   A A  ++A ++ P+ 
Sbjct: 1477 LEIKPDFHEAWFLKGNALIKLERYEE-------------------AVAAYEKALEIKPDF 1517

Query: 483  ADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVA 519
             ++++ +G       +YEEA+   +K + + P+FH A
Sbjct: 1518 HEAWFLKGNALIKLERYEEAVAAYEKALEIKPDFHEA 1554



 Score = 63.2 bits (152), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 77/375 (20%), Positives = 156/375 (41%), Gaps = 56/375 (14%)

Query: 153 FTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQRH 212
           + +A A  ++A ++ P+  ++++ +G       +YEEA+   +K + + P+FH A     
Sbjct: 378 YEEAVAAYEKALEIKPDFHEAWFLKGIALGNLERYEEAVAAYEKALEIKPDFHEA----W 433

Query: 213 FVVHKMIVPGDRERVEQSLKEFRNFVDTHSNVVEACTLFAQVLVDQEDFDGAEEYFNRSI 272
           F+    +  G+ ER E+++  +   ++   +  EA  L    L + E ++ A   + +++
Sbjct: 434 FLKGNAL--GNLERYEEAVAAYEKALEIKPDFHEAWFLKGNALGNLERYEEAVAAYEKAL 491

Query: 273 RVDPENASLYVHRAMLML-QARGNV---DEAIKLIEKAISIDKSCMFAYETLGTIEVQRG 328
            + P+      H A  +   A GN+   +EA+   EKA+ I      A+   G       
Sbjct: 492 EIKPD-----FHDAWFLKGNALGNLERYEEAVAAYEKALEIKPDFHDAWFLKGNALGNLE 546

Query: 329 RLEEAVKCFNKALPLARDEAELSHIYSLRDAAIAQMKVCER----YNIKKKVSPRSQNIT 384
           R EEAV  + KAL +  D       + L+  A+  ++  E     Y    ++ P      
Sbjct: 547 RYEEAVAAYEKALEIKPD---FHEAWFLKGNALGNLERYEEAVAAYEKALEIKPDFHEAW 603

Query: 385 KNEKLAIKQLRENNDIIIRPADKGGKTVVMDKADYTQKMTSILNSNDYEIIPGDPTKTIE 444
             +  A+  L    + +               A Y + +    + +D   + G+      
Sbjct: 604 FLKGNALGNLERYEEAV---------------AAYEKALEIKPDFHDAWFLKGNAL---- 644

Query: 445 ESEKYGNLENESGQKHAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALR 504
                GNLE           + +A A  ++A ++ P+   +++ +G       +YEEA+ 
Sbjct: 645 -----GNLER----------YEEAVAAYEKALEIKPDFHYAWFLKGNALGNLERYEEAVA 689

Query: 505 NLDKTIALNPNFHVA 519
             +K + + P+FH A
Sbjct: 690 AFEKALEIKPDFHEA 704



 Score = 60.1 bits (144), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 84/372 (22%), Positives = 157/372 (42%), Gaps = 50/372 (13%)

Query: 153  FTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQRH 212
            + +A A  ++A ++ P+  +++  +G       +YEEA+   +K + + P+FH A   + 
Sbjct: 718  YEEAVAAFEKALEIKPDFHEAWNNKGIALEKLERYEEAVAAFEKALEIKPDFHEAWNNKG 777

Query: 213  FVVHKMIVPGDRERVEQSLKEFRNFVDTHSNVVEACTLFAQVLVDQEDFDGAEEYFNRSI 272
              + K+      ER E+++  F   ++   +  EA       L   E ++ A   F +++
Sbjct: 778  IALEKL------ERYEEAVAAFEKALEIKPDFHEAWNNKGIALEKLERYEEAVAAFEKAL 831

Query: 273  RVDPENASLYVHRAMLML-QARGNV---DEAIKLIEKAISIDKSCMFAYETLGTIEVQRG 328
             + P+      H A  +   A GN+   +EA+   EKA+ I      A+   G       
Sbjct: 832  EIKPD-----FHDAWFLKGNALGNLERYEEAVAAYEKALEIKPDFHEAWHNKGIALENLE 886

Query: 329  RLEEAVKCFNKALPLARDEAELSHIYSLRDAAIAQMKVCERYNIKKKVSPRSQNITKNEK 388
            R EEAV  + KAL +  D  E     +  +  IA  K+ ERY          + +   EK
Sbjct: 887  RYEEAVAAYEKALEIKPDFHE-----AWNNKGIALEKL-ERY---------EEAVAAFEK 931

Query: 389  -LAIKQLRENNDIIIRPADKGGKTVVMDKADYTQKMTSILNSNDYEIIPGDPTKTIEESE 447
             L IK      D      +KG     +++  Y + + +   +   EI P        +  
Sbjct: 932  ALEIKP-----DFHEAWHNKGNALGNLER--YEEAVAAYEKA--LEIKPDFHYAWFLKGI 982

Query: 448  KYGNLENESGQKHAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLD 507
              G LE           + +A A  ++A ++ P+  ++++ +G       +YEEA+   +
Sbjct: 983  ALGKLER----------YEEAVAAYEKALEIKPDFHEAWFLKGIALGKLERYEEAVAAYE 1032

Query: 508  KTIALNPNFHVA 519
            K + + P+FH A
Sbjct: 1033 KALEIKPDFHEA 1044



 Score = 59.3 bits (142), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 46/202 (22%), Positives = 94/202 (46%), Gaps = 21/202 (10%)

Query: 153  FTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQRH 212
            + +A A  ++A ++ P+  ++++ +G       +YEEA+   +K + + P+FH A   + 
Sbjct: 1398 YEEAVAAYEKALEIKPDFHEAWHNKGIALGKLERYEEAVAAFEKALEIKPDFHEAWHNKG 1457

Query: 213  FVVHKMIVPGDRERVEQSLKEFRNFVDTHSNVVEACTLFAQVLVDQEDFDGAEEYFNRSI 272
              + K+      ER E+++  +   ++   +  EA  L    L+  E ++ A   + +++
Sbjct: 1458 NALIKL------ERYEEAVAAYEKALEIKPDFHEAWFLKGNALIKLERYEEAVAAYEKAL 1511

Query: 273  RVDPENASLYVHRAMLMLQARGNV-------DEAIKLIEKAISIDKSCMFAYETLGTIEV 325
             + P+      H A  +   +GN        +EA+   EKA+ I      A+   G   +
Sbjct: 1512 EIKPD-----FHEAWFL---KGNALIKLERYEEAVAAYEKALEIKPDFHEAWFLKGNALI 1563

Query: 326  QRGRLEEAVKCFNKALPLARDE 347
            +  R EEAV  + KAL +  D+
Sbjct: 1564 KLERYEEAVAAYEKALEIKPDD 1585



 Score = 55.5 bits (132), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 40/195 (20%), Positives = 93/195 (47%), Gaps = 21/195 (10%)

Query: 153  FTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQRH 212
            + +A A  ++A ++ P+  ++++ +G       +YEEA+   +K + + P+FH A   + 
Sbjct: 1432 YEEAVAAFEKALEIKPDFHEAWHNKGNALIKLERYEEAVAAYEKALEIKPDFHEAWFLKG 1491

Query: 213  FVVHKMIVPGDRERVEQSLKEFRNFVDTHSNVVEACTLFAQVLVDQEDFDGAEEYFNRSI 272
              + K+      ER E+++  +   ++   +  EA  L    L+  E ++ A   + +++
Sbjct: 1492 NALIKL------ERYEEAVAAYEKALEIKPDFHEAWFLKGNALIKLERYEEAVAAYEKAL 1545

Query: 273  RVDPENASLYVHRAMLMLQARGNV-------DEAIKLIEKAISIDKSCMFAYETLGTIEV 325
             + P+      H A  +   +GN        +EA+   EKA+ I     ++   LG ++ 
Sbjct: 1546 EIKPD-----FHEAWFL---KGNALIKLERYEEAVAAYEKALEIKPDDEYSIINLGLVKY 1597

Query: 326  QRGRLEEAVKCFNKA 340
            + G +++A++ +  A
Sbjct: 1598 EMGFIDQAIENWQAA 1612


>gi|320101816|ref|YP_004177407.1| serine/threonine protein kinase [Isosphaera pallida ATCC 43644]
 gi|319749098|gb|ADV60858.1| serine/threonine protein kinase [Isosphaera pallida ATCC 43644]
          Length = 923

 Score = 75.5 bits (184), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 99/425 (23%), Positives = 164/425 (38%), Gaps = 82/425 (19%)

Query: 153 FTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQRH 212
           + +A AD   A ++DP   + + +R   Y L G +E+A+R+    I L+P    A  QR 
Sbjct: 499 YEQAIADYSRAIRLDPREPEGFRKRALAYRLMGDFEQAIRDGSTLIELSPRDPTAYLQRG 558

Query: 213 FVVHKMIVPGDRERVEQSLKEFRNFVDTHSNVVEACTLFAQVLVDQEDFDGAEEYFNRSI 272
           +  H++                                         D+D A   ++++I
Sbjct: 559 YSYHQI----------------------------------------GDYDRAIADYSKAI 578

Query: 273 RVDPENASLYVHRAMLMLQARGNVDEAIKLIEKAISIDKSCMFAYETLGTIEVQRGRLEE 332
           R+DP   S Y +R  L L+ARG   EAI+     + ID   + A    G     RG  E+
Sbjct: 579 RLDPGETSGYFNRG-LALRARGMELEAIQDYTSVLEIDPKDVSALVNRGFTYRLRGEFEK 637

Query: 333 AVKCFNKALPLARDEAELSHIYSLRDAAIAQMKVCER----YNIKKKVSPRSQNITKNEK 388
           A++ +++A+ LA D A L+H+   R  A +     ER    +    ++ PR+     N  
Sbjct: 638 AIRDYDEAIRLAPDHA-LAHLN--RGYAFSAQGDHERAIADFTRSIELEPRNPAAYYNRG 694

Query: 389 LAIKQLRE--------NNDIIIRPADKGG-----------KTVVMDKADYTQKM------ 423
            A   L +           I + P D                V     DYTQ +      
Sbjct: 695 FAWTCLGQFARSIPDFTQAIALDPEDGSAYANRAFALHSLGAVAQAIEDYTQALQRLGRD 754

Query: 424 -TSILNSNDYEIIPGDPTKTIEESEKYGNLE--------NESGQKHAASDFTKAFADLDE 474
            ++  N        GD    I++  +   ++        N +  + A  D  +A ADL+E
Sbjct: 755 ASTYYNRGVAHRDRGDHRAAIDDFAEALRIQPSDVAAAVNLAVCRQAVGDLERALADLNE 814

Query: 475 AEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQRHFVWTSTLAEL 534
           A ++DP+ A+ Y  RG+++   G   +A  +    + LNP+   A   R          L
Sbjct: 815 AIRLDPDEAEIYLIRGRLHLQRGDPTQAAADFAAALKLNPDLPSALRLRGLALFKLGKRL 874

Query: 535 MAFSD 539
            A  D
Sbjct: 875 TALLD 879



 Score = 64.7 bits (156), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 56/230 (24%), Positives = 104/230 (45%), Gaps = 22/230 (9%)

Query: 104 RATVYIFTSQSTKAIEDL---TQLVEDTSVDPKIKVNAHIKRAVVHLHAASDFTKAFADL 160
           R   Y    +  KAI D     +L  D ++       AH+ R      A  D  +A AD 
Sbjct: 625 RGFTYRLRGEFEKAIRDYDEAIRLAPDHAL-------AHLNRGYA-FSAQGDHERAIADF 676

Query: 161 DEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQRHFVVHKMIV 220
             + +++P    +YY RG  +   GQ+  ++ +  + IAL+P    A A R F +H +  
Sbjct: 677 TRSIELEPRNPAAYYNRGFAWTCLGQFARSIPDFTQAIALDPEDGSAYANRAFALHSLGA 736

Query: 221 PGDRERVEQSLKEFRNFVDTHSNVVEACTLFAQVLV--DQEDFDGAEEYFNRSIRVDPEN 278
                 V Q+++++   +       +A T + + +   D+ D   A + F  ++R+ P +
Sbjct: 737 ------VAQAIEDYTQALQRLGR--DASTYYNRGVAHRDRGDHRAAIDDFAEALRIQPSD 788

Query: 279 ASLYVHRAMLMLQARGNVDEAIKLIEKAISIDKSCMFAYETLGTIEVQRG 328
            +  V+ A+   QA G+++ A+  + +AI +D      Y   G + +QRG
Sbjct: 789 VAAAVNLAVCR-QAVGDLERALADLNEAIRLDPDEAEIYLIRGRLHLQRG 837



 Score = 63.5 bits (153), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 78/310 (25%), Positives = 121/310 (39%), Gaps = 62/310 (20%)

Query: 70  RAFEHE--DYLTAIRHCTEEIESTSSNHTKALARLLRATVYIFTSQSTKAIEDLTQLVED 127
           RA+E    DY  AIR    E E              RA  Y       +AI D + L+E 
Sbjct: 497 RAYEQAIADYSRAIRLDPREPEGFRK----------RALAYRLMGDFEQAIRDGSTLIEL 546

Query: 128 TSVDPKIKVNAHIKRAVVHLHAASDFTKAFADLDEAEKVDPNVADSYYQRGQ-------- 179
           +  DP     A+++R   + H   D+ +A AD  +A ++DP     Y+ RG         
Sbjct: 547 SPRDP----TAYLQRGYSY-HQIGDYDRAIADYSKAIRLDPGETSGYFNRGLALRARGME 601

Query: 180 --------------------------IYCLFGQYEEALRNLDKTIALNPNFHVARAQRHF 213
                                      Y L G++E+A+R+ D+ I L P+  +A   R +
Sbjct: 602 LEAIQDYTSVLEIDPKDVSALVNRGFTYRLRGEFEKAIRDYDEAIRLAPDHALAHLNRGY 661

Query: 214 VVHKMIVPGDRERVEQSLKEFRNFVDTHSNVVEAC--TLFAQVLVDQEDFDGAEEYFNRS 271
                   GD ER   ++ +F   ++       A     FA   + Q  F  +   F ++
Sbjct: 662 AFSAQ---GDHER---AIADFTRSIELEPRNPAAYYNRGFAWTCLGQ--FARSIPDFTQA 713

Query: 272 IRVDPENASLYVHRAMLMLQARGNVDEAIKLIEKAISIDKSCMFAYETLGTIEVQRGRLE 331
           I +DPE+ S Y +RA   L + G V +AI+   +A+         Y   G     RG   
Sbjct: 714 IALDPEDGSAYANRA-FALHSLGAVAQAIEDYTQALQRLGRDASTYYNRGVAHRDRGDHR 772

Query: 332 EAVKCFNKAL 341
            A+  F +AL
Sbjct: 773 AAIDDFAEAL 782



 Score = 46.2 bits (108), Expect = 0.049,   Method: Compositional matrix adjust.
 Identities = 38/144 (26%), Positives = 64/144 (44%), Gaps = 13/144 (9%)

Query: 83  HCTEEIESTSSNHTKALARLLR-ATVYIFTSQSTK-------AIEDLTQLVEDTSVDPKI 134
           H    +     ++T+AL RL R A+ Y     + +       AI+D  + +     D   
Sbjct: 732 HSLGAVAQAIEDYTQALQRLGRDASTYYNRGVAHRDRGDHRAAIDDFAEALRIQPSDVAA 791

Query: 135 KVNAHIKRAVVHLHAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNL 194
            VN  + R      A  D  +A ADL+EA ++DP+ A+ Y  RG+++   G   +A  + 
Sbjct: 792 AVNLAVCR-----QAVGDLERALADLNEAIRLDPDEAEIYLIRGRLHLQRGDPTQAAADF 846

Query: 195 DKTIALNPNFHVARAQRHFVVHKM 218
              + LNP+   A   R   + K+
Sbjct: 847 AAALKLNPDLPSALRLRGLALFKL 870



 Score = 40.0 bits (92), Expect = 3.2,   Method: Compositional matrix adjust.
 Identities = 22/69 (31%), Positives = 36/69 (52%), Gaps = 2/69 (2%)

Query: 459 KHAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHV 518
           KH A  + +A AD   A ++DP   + + +R   Y L G +E+A+R+    I L+P    
Sbjct: 495 KHRA--YEQAIADYSRAIRLDPREPEGFRKRALAYRLMGDFEQAIRDGSTLIELSPRDPT 552

Query: 519 ARAQRHFVW 527
           A  QR + +
Sbjct: 553 AYLQRGYSY 561


>gi|434399045|ref|YP_007133049.1| Tetratricopeptide TPR_1 repeat-containing protein [Stanieria
           cyanosphaera PCC 7437]
 gi|428270142|gb|AFZ36083.1| Tetratricopeptide TPR_1 repeat-containing protein [Stanieria
           cyanosphaera PCC 7437]
          Length = 723

 Score = 75.5 bits (184), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 75/370 (20%), Positives = 168/370 (45%), Gaps = 12/370 (3%)

Query: 153 FTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQRH 212
             +A A  + A +++ ++A +++ RG      G+ EEAL + ++   L P F        
Sbjct: 93  LEEALASYNHAIELNSDLAFAWHNRGIALRNLGRLEEALASCERATKLAPEFDFIWHNHG 152

Query: 213 FVVHKMIVPGDRERVEQSLKEFRNFVDTHSNVVEACTLFAQVLVDQEDFDGAEEYFNRSI 272
           + +H +       R+++++  +   ++   +        + VL +    + A   +NR++
Sbjct: 153 YTLHLL------GRLQEAIASYNRVIELKPDDATVWLNHSNVLTNLGRLEEAVVSYNRAL 206

Query: 273 RVDPENASLYVHRAMLMLQARGNVDEAIKLIEKAISIDKSCMFAYETLGTIEVQRGRLEE 332
            + P++A+ + +R   +L   G ++EA+   ++A+ +      A+   G +    GRLEE
Sbjct: 207 ELKPDDANAWYNRGN-VLNDLGRLNEAVANYDRALELKPDDATAWFKRGNVLNDLGRLEE 265

Query: 333 AVKCFNKALPLARDEAEL--SHIYSLRDAAIAQMKVCERYNIKKKVSPRSQNITKNEKLA 390
           AV  +N+AL L  ++A +  +H   L++    +  V   Y    K+ P   +   N   A
Sbjct: 266 AVVSYNRALELKPNDANIWFNHGIGLKNLGRLEEAVAS-YERAIKLKPNDASAWFNRGNA 324

Query: 391 IKQLRENNDIIIRPADKGGKTVVMDKADYTQKMTSILNSNDYEIIPGDPTKTIE-ESEKY 449
           + +L+ + + I    D+  +    D   +  +  ++ N    +       ++IE +S+  
Sbjct: 325 LLKLKCDEEAIA-SYDRSIELKPDDATVWHNRGIALKNLGRLKEAVASYDRSIELKSDDA 383

Query: 450 GNLENESGQKHAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKT 509
               N     +      +A A  D A +++PN  +++++RG+      + EEA+ + ++ 
Sbjct: 384 SAWHNRGIALNDLKRHEEALASCDRALEINPNYVEAWFERGKTLDNLNRLEEAVTSYERV 443

Query: 510 IALNPNFHVA 519
           I L P+  +A
Sbjct: 444 IKLQPDHALA 453



 Score = 74.3 bits (181), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 92/413 (22%), Positives = 167/413 (40%), Gaps = 57/413 (13%)

Query: 136 VNAHIKRAVVHLHAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLD 195
            NA   RA+  L       +A A+ D A ++ P+ A ++Y RG      G+ EEAL + +
Sbjct: 43  ANAWYNRAIT-LSNLGRLNEAVANYDRAIELQPDDATAWYNRGNALDDLGRLEEALASYN 101

Query: 196 KTIALNPNFHVARAQRHFVVHKMI----VPGDRERVEQSLKEFRNFVDTHSNVVEACTLF 251
             I LN +   A   R   +  +          ER  +   EF      H   +      
Sbjct: 102 HAIELNSDLAFAWHNRGIALRNLGRLEEALASCERATKLAPEFDFIWHNHGYTLHLLGRL 161

Query: 252 AQVLVDQEDFDGAEEYFNRSIRVDPENASLYVHRAMLMLQARGNVDEAIKLIEKAISIDK 311
            + +            +NR I + P++A+++++ +  +L   G ++EA+    +A+ +  
Sbjct: 162 QEAIAS----------YNRVIELKPDDATVWLNHSN-VLTNLGRLEEAVVSYNRALELKP 210

Query: 312 SCMFAYETLGTIEVQRGRLEEAVKCFNKALPLARDEAE--------LSHIYSLRDAAIAQ 363
               A+   G +    GRL EAV  +++AL L  D+A         L+ +  L +A ++ 
Sbjct: 211 DDANAWYNRGNVLNDLGRLNEAVANYDRALELKPDDATAWFKRGNVLNDLGRLEEAVVS- 269

Query: 364 MKVCERYNIKKKVSPRSQNITKNEKLAIKQLRENNDII--------IRPADKG-----GK 410
                 YN   ++ P   NI  N  + +K L    + +        ++P D       G 
Sbjct: 270 ------YNRALELKPNDANIWFNHGIGLKNLGRLEEAVASYERAIKLKPNDASAWFNRGN 323

Query: 411 TVVMDKADYTQKMTSILNSNDYEIIPGDPTKTIEESEKYGNLENESGQKHAASDFTKAFA 470
            ++  K D  + + S   S   E+ P D T          NL              +A A
Sbjct: 324 ALLKLKCD-EEAIASYDRS--IELKPDDATVWHNRGIALKNL----------GRLKEAVA 370

Query: 471 DLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQR 523
             D + ++  + A +++ RG       ++EEAL + D+ + +NPN+  A  +R
Sbjct: 371 SYDRSIELKSDDASAWHNRGIALNDLKRHEEALASCDRALEINPNYVEAWFER 423



 Score = 70.9 bits (172), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 87/388 (22%), Positives = 158/388 (40%), Gaps = 34/388 (8%)

Query: 155 KAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQRHFV 214
           +A A  D + ++ P+ A  ++ RG      G+ +EA+ + D++I L  +   A   R   
Sbjct: 333 EAIASYDRSIELKPDDATVWHNRGIALKNLGRLKEAVASYDRSIELKSDDASAWHNRGIA 392

Query: 215 VHKMIVPGDRERVEQSLKEFRNFVDTHSNVVEACTLFAQVLVDQEDFDGAEEYFNRSIRV 274
           ++      D +R E++L      ++ + N VEA     + L +    + A   + R I++
Sbjct: 393 LN------DLKRHEEALASCDRALEINPNYVEAWFERGKTLDNLNRLEEAVTSYERVIKL 446

Query: 275 DPENASLYVHRAMLMLQARGNVDEAIKLIEKAISIDKSCMFAYETLGTIEVQRGRLEEAV 334
            P++A   +++  L+       +EA+    +A+         +   G   +   RLEEAV
Sbjct: 447 QPDHALALLYQGALLCDYLQRYEEALTNFNQALKFAPENPNVWVNRGVALINLNRLEEAV 506

Query: 335 KCFNKALPL--ARDEAELSHIYSLRDAAIAQMKVCERYNIKKKVSPRSQNITKNEKLAIK 392
             + +AL L      A LS    L D      +    +N   K +P + N+  N  +A+ 
Sbjct: 507 ASYKRALELQPKNPHAWLSQGALLCDYLQRYEEALTNFNQALKFAPENPNVWVNRGVALI 566

Query: 393 QLRENNDII--------IRPADKGGKTVVMDKA---DYTQKMTSILNSND--YEIIPGDP 439
            L    + +        ++P  K     +   A   DY Q+    L S +   E+ P + 
Sbjct: 567 NLNRLEEAVASYKRALELQP--KNPHAWLSQGALLCDYLQRYEEALTSFERVIELQPNNV 624

Query: 440 TKTIEESEKYGNLENESGQKHAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYC-LFGQ 498
              +       NL+              A A  D A ++ PN  +++  +G + C    +
Sbjct: 625 NAWVNRGVALINLDR----------LEAALASYDRALELQPNNVNAWLNKGALLCDRLQR 674

Query: 499 YEEALRNLDKTIALNPNFHVARAQRHFV 526
           YEEAL N ++ I L PN  +    R  V
Sbjct: 675 YEEALTNFERAIELQPNNALVWYNRAIV 702



 Score = 62.8 bits (151), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 67/274 (24%), Positives = 131/274 (47%), Gaps = 34/274 (12%)

Query: 259 EDFDGAEEYFNRSIRVDPENASLYVHRAMLMLQARGNVDEAIKLIEKAISIDKSCMFAYE 318
           ++++ A   ++R+I + P++A+ + +RA+  L   G ++EA+   ++AI +      A+ 
Sbjct: 23  KNYEEALASYDRAIELKPDDANAWYNRAI-TLSNLGRLNEAVANYDRAIELQPDDATAWY 81

Query: 319 TLGTIEVQRGRLEEAVKCFNKALPLARDEAELSH--IYSLRDAAIAQ--MKVCERYNIKK 374
             G      GRLEEA+  +N A+ L  D A   H    +LR+    +  +  CER     
Sbjct: 82  NRGNALDDLGRLEEALASYNHAIELNSDLAFAWHNRGIALRNLGRLEEALASCER---AT 138

Query: 375 KVSPRSQNITKNEKLA---IKQLRE-----NNDIIIRPADKGGKTVVMDKADYTQKMT-- 424
           K++P    I  N       + +L+E     N  I ++P D    TV ++ ++    +   
Sbjct: 139 KLAPEFDFIWHNHGYTLHLLGRLQEAIASYNRVIELKPDD---ATVWLNHSNVLTNLGRL 195

Query: 425 --SILNSND-YEIIPGDPTKTIEESEKYGNLENESGQKHAASDFTKAFADLDEAEKVDPN 481
             ++++ N   E+ P D           GN+ N+ G+        +A A+ D A ++ P+
Sbjct: 196 EEAVVSYNRALELKPDDANAWYNR----GNVLNDLGR------LNEAVANYDRALELKPD 245

Query: 482 VADSYYQRGQIYCLFGQYEEALRNLDKTIALNPN 515
            A ++++RG +    G+ EEA+ + ++ + L PN
Sbjct: 246 DATAWFKRGNVLNDLGRLEEAVVSYNRALELKPN 279



 Score = 58.2 bits (139), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 57/278 (20%), Positives = 118/278 (42%), Gaps = 36/278 (12%)

Query: 98  ALARLLRATVYI-FTSQSTKAIEDLTQLVEDTSVDPKIKVNAHIKRAVVHLHAASDFTKA 156
           ALA L +  +   +  +  +A+ +  Q ++    +P + VN  +  A+++L+      +A
Sbjct: 451 ALALLYQGALLCDYLQRYEEALTNFNQALKFAPENPNVWVNRGV--ALINLN---RLEEA 505

Query: 157 FADLDEAEKVDPNVADSYYQRGQIYCLFGQ-YEEALRNLDKTIAL---NPNFHVARA--- 209
            A    A ++ P    ++  +G + C + Q YEEAL N ++ +     NPN  V R    
Sbjct: 506 VASYKRALELQPKNPHAWLSQGALLCDYLQRYEEALTNFNQALKFAPENPNVWVNRGVAL 565

Query: 210 -------------QRHFVV-----HKMIVPGDR-----ERVEQSLKEFRNFVDTHSNVVE 246
                        +R   +     H  +  G       +R E++L  F   ++   N V 
Sbjct: 566 INLNRLEEAVASYKRALELQPKNPHAWLSQGALLCDYLQRYEEALTSFERVIELQPNNVN 625

Query: 247 ACTLFAQVLVDQEDFDGAEEYFNRSIRVDPENASLYVHRAMLMLQARGNVDEAIKLIEKA 306
           A       L++ +  + A   ++R++ + P N + ++++  L+       +EA+   E+A
Sbjct: 626 AWVNRGVALINLDRLEAALASYDRALELQPNNVNAWLNKGALLCDRLQRYEEALTNFERA 685

Query: 307 ISIDKSCMFAYETLGTIEVQRGRLEEAVKCFNKALPLA 344
           I +  +    +     +    GR EEA   +++ L L+
Sbjct: 686 IELQPNNALVWYNRAIVLDNLGREEEAAASYDRYLKLS 723


>gi|427420258|ref|ZP_18910441.1| tetratricopeptide repeat protein [Leptolyngbya sp. PCC 7375]
 gi|425762971|gb|EKV03824.1| tetratricopeptide repeat protein [Leptolyngbya sp. PCC 7375]
          Length = 477

 Score = 75.5 bits (184), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 77/374 (20%), Positives = 161/374 (43%), Gaps = 35/374 (9%)

Query: 168 PNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQRHFVVHKMIVPGDRERV 227
           PN A +Y+ RG  +   G Y  A+ +    I L P++  A   R     K+         
Sbjct: 34  PNYAKAYFNRGCAHYAMGNYAVAIEDFSWAIHLTPDYASAYLNRGNAQRKL------GHT 87

Query: 228 EQSLKEFRNFVDTHSNVVEACTLFAQVLVDQEDFDGAEEYFNRSIRVDPENASLYVHRAM 287
           + +L++F   +               + ++  ++ GA   F+ ++R+ P     Y+ R +
Sbjct: 88  DAALEDFERGIQLTPLSTRGYCNRGLLRLEVGNYAGAVRDFDYALRLQPHFPRGYLWRGV 147

Query: 288 LMLQARGNVDEAIKLIEKAISIDKSCMFAYETLGTIEVQRGRLEEAVKCFNKALPLARDE 347
             L+  G+  +AI  + +A++++  C   Y   G     +   ++A+  FN+A+ L +D 
Sbjct: 148 AWLRC-GDFKQAINDLNRALALNPHCAKTYNQRGLAYFYQVDYKQALADFNQAVDLDKDL 206

Query: 348 AE-LSHIYSLR----DAAIAQMKVCERYNIK-----------KKVSPRSQNITKNEKLAI 391
           A+  ++  +LR    D A A    C+  ++            K++    Q+     KLA+
Sbjct: 207 ADAYNNRAALRTEMGDYAGAMADYCKALHLNPALPEAYPQTLKQLHNALQDYPSPGKLAL 266

Query: 392 KQLRENNDIIIRPADKGG------KTVVMDKAD---YTQKMTSILNSNDYEIIPGDPTKT 442
              R N    +   D  G      + + +D      Y  +    L  ++YE+   D ++ 
Sbjct: 267 LNNRGNTRATL--GDSSGALNDYTEALRLDPNHAYVYNNRGLVRLYLHNYEMAATDFSEA 324

Query: 443 IEESEKYGN-LENESGQKHAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEE 501
           I  + ++     N  G +    +   A  D+++A  ++P++A++Y  RG+I+     Y +
Sbjct: 325 IRLNPQFAEAFSNRGGIRQHLGNLEGALQDINQALDLNPSLANAYVHRGRIHVDLKNYMK 384

Query: 502 ALRNLDKTIALNPN 515
           A+ + +K ++L P+
Sbjct: 385 AMADFNKALSLQPD 398



 Score = 65.9 bits (159), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 62/265 (23%), Positives = 119/265 (44%), Gaps = 23/265 (8%)

Query: 102 LLRATVYIFTSQSTKAIEDLTQLVEDTSVDPKIKVNAHIKRAVVHLHAASDFTKAFADLD 161
           L R   ++      +AI DL + +   +++P      + +R + + +   D+ +A AD +
Sbjct: 143 LWRGVAWLRCGDFKQAINDLNRAL---ALNPHC-AKTYNQRGLAYFYQV-DYKQALADFN 197

Query: 162 EAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQR----HFVVHK 217
           +A  +D ++AD+Y  R  +    G Y  A+ +  K + LNP    A  Q     H  +  
Sbjct: 198 QAVDLDKDLADAYNNRAALRTEMGDYAGAMADYCKALHLNPALPEAYPQTLKQLHNALQD 257

Query: 218 MIVPG------DRERVEQSLKEFRNFVDTHSNVVEACTLFAQVLVDQ-------EDFDGA 264
              PG      +R     +L +    ++ ++  +      A V  ++        +++ A
Sbjct: 258 YPSPGKLALLNNRGNTRATLGDSSGALNDYTEALRLDPNHAYVYNNRGLVRLYLHNYEMA 317

Query: 265 EEYFNRSIRVDPENASLYVHRAMLMLQARGNVDEAIKLIEKAISIDKSCMFAYETLGTIE 324
              F+ +IR++P+ A  + +R  +  Q  GN++ A++ I +A+ ++ S   AY   G I 
Sbjct: 318 ATDFSEAIRLNPQFAEAFSNRGGIR-QHLGNLEGALQDINQALDLNPSLANAYVHRGRIH 376

Query: 325 VQRGRLEEAVKCFNKALPLARDEAE 349
           V      +A+  FNKAL L  D A 
Sbjct: 377 VDLKNYMKAMADFNKALSLQPDAAH 401



 Score = 53.1 bits (126), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 42/178 (23%), Positives = 79/178 (44%), Gaps = 7/178 (3%)

Query: 151 SDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQ 210
            D + A  D  EA ++DPN A  Y  RG +      YE A  +  + I LNP F  A + 
Sbjct: 278 GDSSGALNDYTEALRLDPNHAYVYNNRGLVRLYLHNYEMAATDFSEAIRLNPQFAEAFSN 337

Query: 211 RHFVVHKMIVPGDRERVEQSLKEFRNFVDTHSNVVEACTLFAQVLVDQEDFDGAEEYFNR 270
           R  +   +        +E +L++    +D + ++  A     ++ VD +++  A   FN+
Sbjct: 338 RGGIRQHL------GNLEGALQDINQALDLNPSLANAYVHRGRIHVDLKNYMKAMADFNK 391

Query: 271 SIRVDPENASLYVHRAMLMLQARGNVDEAIKLIEKAISIDKSCMFAYETLGTIEVQRG 328
           ++ + P+ A     R++L  +   + + A+  + +A+ +      AY     I   RG
Sbjct: 392 ALSLQPDAAHTLNERSVLRFRL-NDTEGALADVNRALELQPQFSDAYINRSLIRFDRG 448


>gi|239988495|ref|ZP_04709159.1| hypothetical protein SrosN1_14397 [Streptomyces roseosporus NRRL
           11379]
          Length = 341

 Score = 75.5 bits (184), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 70/251 (27%), Positives = 116/251 (46%), Gaps = 12/251 (4%)

Query: 93  SNHTKALARLLRATVYIFTSQSTKAIEDLTQLVEDTSVDPKIKVNAHIKRAVVHLHAASD 152
           ++  +A A + RA       +   A+ D  + V   +VDP+ +  AH  RAV+ L +   
Sbjct: 83  TDRDRAAALVARAWDRFRAGELDAALSDHGRAV---AVDPRSE-RAHQGRAVI-LRSLGR 137

Query: 153 FTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQRH 212
             +A ADLD AE++ P  A +  +RG+ Y   G+ EEAL  LD+  AL+P+  V    R 
Sbjct: 138 HEEALADLDRAEEIAPAWAWAVRERGETYRRMGRLEEALTVLDRAHALDPSDAVPLGSRG 197

Query: 213 FVVHKMIVPGDRERVEQSLKEFRNFVDTHSNVVEACTLFAQVLVDQEDFDGAEEYFNRSI 272
            V H +       R E++L +F   +        A    ++V     D  GA    +R+ 
Sbjct: 198 LVRHAL------GRHEEALDDFDRAIALWPEYAWALVRRSRVRTVLGDPVGALADLDRAE 251

Query: 273 RVDPENASLYVHRAMLMLQARGNVDEAIKLIEKAISIDKSCMFAYETLGTIEVQRGRLEE 332
            ++P  A     R  +  +A G  +EA+    +A+++D    +A+ +        GRL E
Sbjct: 252 ELNPGRAGTEGERGEVY-RATGRHEEAVACYGRALALDPEYAWAHGSRALALEALGRLPE 310

Query: 333 AVKCFNKALPL 343
           A    ++AL L
Sbjct: 311 ARADLDRALEL 321



 Score = 48.5 bits (114), Expect = 0.010,   Method: Compositional matrix adjust.
 Identities = 22/64 (34%), Positives = 36/64 (56%)

Query: 463 SDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQ 522
            D   A ADLD AE+++P  A +  +RG++Y   G++EEA+    + +AL+P +  A   
Sbjct: 238 GDPVGALADLDRAEELNPGRAGTEGERGEVYRATGRHEEAVACYGRALALDPEYAWAHGS 297

Query: 523 RHFV 526
           R   
Sbjct: 298 RALA 301



 Score = 47.4 bits (111), Expect = 0.020,   Method: Compositional matrix adjust.
 Identities = 25/60 (41%), Positives = 35/60 (58%)

Query: 467 KAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQRHFV 526
           +A ADLD AE++ P  A +  +RG+ Y   G+ EEAL  LD+  AL+P+  V    R  V
Sbjct: 140 EALADLDRAEEIAPAWAWAVRERGETYRRMGRLEEALTVLDRAHALDPSDAVPLGSRGLV 199


>gi|392573161|gb|EIW66302.1| hypothetical protein TREMEDRAFT_57790 [Tremella mesenterica DSM
           1558]
          Length = 158

 Score = 75.5 bits (184), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 43/141 (30%), Positives = 77/141 (54%), Gaps = 4/141 (2%)

Query: 234 FRNFVDTHSNVVEACTLFAQVLVDQEDFDGAEEYFNRSIRVD----PENASLYVHRAMLM 289
           FR  +    +  E    + ++L+DQ+ FD +   F+RS+ +D    P N    V++A+ +
Sbjct: 4   FRRILKQFPDRGEPSNYYGELLLDQQKFDESISRFDRSLELDKDKNPRNVLPLVNKALAV 63

Query: 290 LQARGNVDEAIKLIEKAISIDKSCMFAYETLGTIEVQRGRLEEAVKCFNKALPLARDEAE 349
            Q + ++ +A  L  +A++ID  C  A  TL  + +Q+G L+EA+K F K+  LAR E E
Sbjct: 64  FQFKQDLAQAEALCTEALNIDPDCDVAVATLAQLSLQQGNLDEAIKWFEKSAKLARTEGE 123

Query: 350 LSHIYSLRDAAIAQMKVCERY 370
           + +  +   A+ AQ +  + Y
Sbjct: 124 MVNAITYEHASRAQKEFLKNY 144


>gi|384207733|ref|YP_005593453.1| hypothetical protein Bint_0239 [Brachyspira intermedia PWS/A]
 gi|343385383|gb|AEM20873.1| TPR domain-containing protein [Brachyspira intermedia PWS/A]
          Length = 392

 Score = 75.5 bits (184), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 70/287 (24%), Positives = 132/287 (45%), Gaps = 32/287 (11%)

Query: 66  SKAKRAFEHED-YLTAIRHCTEEIESTSSNHTKALARLLRATVYIFTSQSTKAIEDLTQL 124
           + AK    +ED Y +A+   T  I+    N   A A   R  +      S +A++D  + 
Sbjct: 47  ANAKANINNEDSYKSAVEDYTWTIKL---NDKFAAAYYNRGIINRSLGNSEEALKDFDKT 103

Query: 125 VE-DTSVDPKIKVNAHIKRAVVHLHAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCL 183
           +E + +++    V A+ K ++       D+  +  D ++A +V P+ AD+YY R      
Sbjct: 104 IELNYNLEEAYYVRANTKASL------KDYKGSIEDYNKAIEVYPHFADAYYNRALSKNA 157

Query: 184 FGQYEEALRNLDKTIALNPNFHVARAQRHFVVHKMIVPGDRERVEQSLKEFRNFVDTHSN 243
             +Y+EA+++ DK I  N +F             +    +R  V++ L  F   +D ++N
Sbjct: 158 LSEYKEAIKDYDKAIEYNSHF-------------IDAYNNRGNVKEKLGNFNEAIDDYTN 204

Query: 244 VVEACTLFAQVLVDQ-------EDFDGAEEYFNRSIRVDPENASLYVHRAMLMLQARGNV 296
            +     FA    ++       +D+ GA E F+  I+++P+    Y++R ++ +   G  
Sbjct: 205 AIHINREFADGYFNRANAKFHIKDYKGAVEDFDELIKINPKYTKAYLNRGIIAM-TMGAY 263

Query: 297 DEAIKLIEKAISIDKSCMFAYETLGTIEVQRGRLEEAVKCFNKALPL 343
            EAIK  +KAI +D +   AY          G  +EA+  +++A+ L
Sbjct: 264 QEAIKDFDKAIELDSNIADAYYNKAVALNHLGIYDEAILYYDQAIKL 310



 Score = 58.9 bits (141), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 66/264 (25%), Positives = 113/264 (42%), Gaps = 25/264 (9%)

Query: 266 EYFNRSIRVDPENASLYVHRAMLMLQARGNVDE------AIKLIEKAISIDKSCMFAYET 319
           EYF+  I++D      Y +RA     A+ N++       A++     I ++     AY  
Sbjct: 27  EYFSEVIKLDSTIYEAYYNRA----NAKANINNEDSYKSAVEDYTWTIKLNDKFAAAYYN 82

Query: 320 LGTIEVQRGRLEEAVKCFNKALPLARDEAELSHIYSLRDAAIAQMK-VCERYNIKKKVSP 378
            G I    G  EEA+K F+K + L  +  E  ++ +   A++   K   E YN   +V P
Sbjct: 83  RGIINRSLGNSEEALKDFDKTIELNYNLEEAYYVRANTKASLKDYKGSIEDYNKAIEVYP 142

Query: 379 RSQNITKNEKLAIKQLRENNDIIIRPADKGGK------TVVMDKADYTQKMTSILNSNDY 432
              +   N  L+   L E  + I +  DK  +          ++ +  +K+ +   + D 
Sbjct: 143 HFADAYYNRALSKNALSEYKEAI-KDYDKAIEYNSHFIDAYNNRGNVKEKLGNFNEAID- 200

Query: 433 EIIPGDPTKTIEESEKYGN-LENESGQKHAASDFTKAFADLDEAEKVDPNVADSYYQRGQ 491
                D T  I  + ++ +   N +  K    D+  A  D DE  K++P    +Y  RG 
Sbjct: 201 -----DYTNAIHINREFADGYFNRANAKFHIKDYKGAVEDFDELIKINPKYTKAYLNRGI 255

Query: 492 IYCLFGQYEEALRNLDKTIALNPN 515
           I    G Y+EA+++ DK I L+ N
Sbjct: 256 IAMTMGAYQEAIKDFDKAIELDSN 279



 Score = 54.7 bits (130), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 37/130 (28%), Positives = 62/130 (47%), Gaps = 15/130 (11%)

Query: 75  EDYLTAIRHCTEEIESTSSNHTKALARLLRATVYIFTSQSTKAIEDLTQLVEDTSVDPKI 134
           +DY  AI H   E      N         RA           A+ED  +L++   ++PK 
Sbjct: 200 DDYTNAI-HINREFADGYFN---------RANAKFHIKDYKGAVEDFDELIK---INPKY 246

Query: 135 KVNAHIKRAVVHLHAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNL 194
              A++ R ++ +   + + +A  D D+A ++D N+AD+YY +       G Y+EA+   
Sbjct: 247 -TKAYLNRGIIAMTMGA-YQEAIKDFDKAIELDSNIADAYYNKAVALNHLGIYDEAILYY 304

Query: 195 DKTIALNPNF 204
           D+ I LNPN+
Sbjct: 305 DQAIKLNPNY 314



 Score = 44.7 bits (104), Expect = 0.12,   Method: Compositional matrix adjust.
 Identities = 31/85 (36%), Positives = 41/85 (48%), Gaps = 11/85 (12%)

Query: 450 GNLENESGQKHAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKT 509
            N+ NE   K A  D+T          K++   A +YY RG I    G  EEAL++ DKT
Sbjct: 51  ANINNEDSYKSAVEDYTWTI-------KLNDKFAAAYYNRGIINRSLGNSEEALKDFDKT 103

Query: 510 IALNPNFHVARAQRHFVWTSTLAEL 534
           I LN N   A    ++V  +T A L
Sbjct: 104 IELNYNLEEA----YYVRANTKASL 124


>gi|428302097|ref|YP_007140403.1| hypothetical protein Cal6303_5553 [Calothrix sp. PCC 6303]
 gi|428238641|gb|AFZ04431.1| Tetratricopeptide TPR_1 repeat-containing protein [Calothrix sp.
           PCC 6303]
          Length = 211

 Score = 75.5 bits (184), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 51/199 (25%), Positives = 99/199 (49%), Gaps = 7/199 (3%)

Query: 151 SDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQ 210
            D   A AD ++A K++PN+  +YY RG      G  + A+ + ++ I +NPN+  A   
Sbjct: 2   GDKQGAIADYNQAIKINPNLDVAYYNRGSTRSDLGDKQRAIIDFNQAIKINPNYAEAYNN 61

Query: 211 RHFVVHKMIVPGDRERVEQSLKEFRNFVDTHSNVVEACTLFAQVLVDQEDFDGAEEYFNR 270
           R F  +++   GD+   + ++ ++   +  + N  EA +       +  D  GA   FN+
Sbjct: 62  RGFARYEL---GDK---QGAITDYTQAIKINPNDAEAYSNRGIARSELGDKQGALADFNQ 115

Query: 271 SIRVDPENASLYVHRAMLMLQARGNVDEAIKLIEKAISIDKSCMFAYETLGTIEVQRGRL 330
           +I+++P +A  Y +R ++  +  G+   AI    +AI I+ +   AY   G +  + G  
Sbjct: 116 AIKINPNDAEAYNNRGVVRSKL-GDKQGAITDYTQAIKINPNLAQAYNNRGVVRSELGDQ 174

Query: 331 EEAVKCFNKALPLARDEAE 349
           + A++ F KA  L + + +
Sbjct: 175 QGAIQDFQKAGELLKQQGD 193



 Score = 43.9 bits (102), Expect = 0.20,   Method: Compositional matrix adjust.
 Identities = 25/85 (29%), Positives = 40/85 (47%)

Query: 463 SDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQ 522
            D   A AD ++A K++PN+  +YY RG      G  + A+ + ++ I +NPN+  A   
Sbjct: 2   GDKQGAIADYNQAIKINPNLDVAYYNRGSTRSDLGDKQRAIIDFNQAIKINPNYAEAYNN 61

Query: 523 RHFVWTSTLAELMAFSDEFMIPKIT 547
           R F       +  A +D     KI 
Sbjct: 62  RGFARYELGDKQGAITDYTQAIKIN 86



 Score = 42.7 bits (99), Expect = 0.53,   Method: Compositional matrix adjust.
 Identities = 23/77 (29%), Positives = 37/77 (48%)

Query: 463 SDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQ 522
            D   A AD ++A K++PN A++Y  RG +    G  + A+ +  + I +NPN   A   
Sbjct: 104 GDKQGALADFNQAIKINPNDAEAYNNRGVVRSKLGDKQGAITDYTQAIKINPNLAQAYNN 163

Query: 523 RHFVWTSTLAELMAFSD 539
           R  V +    +  A  D
Sbjct: 164 RGVVRSELGDQQGAIQD 180


>gi|386812211|ref|ZP_10099436.1| conserved hypothetical protein [planctomycete KSU-1]
 gi|386404481|dbj|GAB62317.1| conserved hypothetical protein [planctomycete KSU-1]
          Length = 418

 Score = 75.5 bits (184), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 90/380 (23%), Positives = 156/380 (41%), Gaps = 71/380 (18%)

Query: 154 TKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVA------ 207
            +A A+L +  ++DP   D+++Q G +Y   G +EEA+  L   + L+PN  +A      
Sbjct: 67  NEAIAELKKTVEIDPTCKDAFFQLGLLYMNKGLWEEAVAALQSVVQLDPNHELAYSKLGD 126

Query: 208 --RAQRHF------------------VVH---KMIVPGDRERVEQSLKEFRNFVDTHSNV 244
             R+++ F                  V H    +   G+ E+ E+++  F   +  + N 
Sbjct: 127 IYRSKKMFREAVQEYKKVLDINPQDAVTHYHLGLAYVGENEK-EEAICAFMAAIVINPNY 185

Query: 245 VEACTLFAQVLVDQEDFDGAEEYFNRSIRVDPENASLYVHRAMLMLQARGNVDEAIKLIE 304
            +A     QV +D +  D A   F +   ++P +A  + H   L   A+G+ D A+   +
Sbjct: 186 TDAHFCLGQVYLDMKLLDEALSEFKKVTDINPHHAPAHYHLG-LTYYAKGDTDNAMDAYK 244

Query: 305 KAISIDKSCMFAYETLGTIEVQRGRLEEAVKCFNKALPLARDEAELSHIYSLRDAAIAQM 364
           K+I ID      +  LG +       + A++ F+  + L  D+AE            A  
Sbjct: 245 KSIEIDPKNPKVHYNLGIVYADERLFDNAIEEFSTVVKLDSDDAE------------AHY 292

Query: 365 KVCERYNIKKKVSPRSQNITKNEKLAIKQLRENNDIIIRPADKGGKTVVMDKADYTQKMT 424
           ++ + Y  K+ ++   + I   +K A       N                DK    + + 
Sbjct: 293 RLGKAYADKRVLA---KAIASVQKAAAAHYNIQNP-------------YSDKRALDEAII 336

Query: 425 SILNSNDYEIIPGDPTKTIEESEKYGNLENESGQKHAASDFTKAFADLDEAEKVDPNVAD 484
           S+  S   E+ P DP+        Y +L +   Q     D  KA   L+E  ++DPN A 
Sbjct: 337 SLQKS--IEVNPYDPSV-------YFDLGSAYSQSKVLDDAAKA---LEETIRIDPNFAK 384

Query: 485 SYYQRGQIYCLFGQYEEALR 504
           ++Y  G IY   G  EEA R
Sbjct: 385 AHYGLGMIYKRKGMEEEAHR 404



 Score = 42.4 bits (98), Expect = 0.70,   Method: Compositional matrix adjust.
 Identities = 47/207 (22%), Positives = 89/207 (42%), Gaps = 18/207 (8%)

Query: 136 VNAHIKRAVVHL----HAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEAL 191
           +N H   A  HL    +A  D   A     ++ ++DP     +Y  G +Y     ++ A+
Sbjct: 215 INPHHAPAHYHLGLTYYAKGDTDNAMDAYKKSIEIDPKNPKVHYNLGIVYADERLFDNAI 274

Query: 192 RNLDKTIALNPNFHVARAQRHFVVHKMIVPGDRERVEQSLKEFRNFVDTHSNVVEACTLF 251
                 + L+ +     A+ H+ + K     D+  + +++   +     H N+    +  
Sbjct: 275 EEFSTVVKLDSD----DAEAHYRLGKAY--ADKRVLAKAIASVQKAAAAHYNIQNPYS-- 326

Query: 252 AQVLVDQEDFDGAEEYFNRSIRVDPENASLYVHRAMLMLQARGNVDEAIKLIEKAISIDK 311
                D+   D A     +SI V+P + S+Y        Q++  +D+A K +E+ I ID 
Sbjct: 327 -----DKRALDEAIISLQKSIEVNPYDPSVYFDLGSAYSQSKV-LDDAAKALEETIRIDP 380

Query: 312 SCMFAYETLGTIEVQRGRLEEAVKCFN 338
           +   A+  LG I  ++G  EEA + F+
Sbjct: 381 NFAKAHYGLGMIYKRKGMEEEAHREFS 407



 Score = 41.2 bits (95), Expect = 1.3,   Method: Compositional matrix adjust.
 Identities = 19/64 (29%), Positives = 37/64 (57%)

Query: 466 TKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQRHF 525
            +A A+L +  ++DP   D+++Q G +Y   G +EEA+  L   + L+PN  +A ++   
Sbjct: 67  NEAIAELKKTVEIDPTCKDAFFQLGLLYMNKGLWEEAVAALQSVVQLDPNHELAYSKLGD 126

Query: 526 VWTS 529
           ++ S
Sbjct: 127 IYRS 130


>gi|427737387|ref|YP_007056931.1| serine/threonine protein kinase [Rivularia sp. PCC 7116]
 gi|427372428|gb|AFY56384.1| serine/threonine protein kinase [Rivularia sp. PCC 7116]
          Length = 671

 Score = 75.5 bits (184), Expect = 8e-11,   Method: Compositional matrix adjust.
 Identities = 61/240 (25%), Positives = 115/240 (47%), Gaps = 12/240 (5%)

Query: 104 RATVYIFTSQSTKAIEDLTQLVEDTSVDPKIKVNAHIKRAVVHLHAASDFTKAFADLDEA 163
           RA       +   AI D  Q ++   ++P+   +A+  R +   H   +  KA ADL++A
Sbjct: 388 RAFSLYLVGEFNGAIIDYNQAIK---LNPEY-ADAYYGRGLAR-HEIKENRKAIADLNQA 442

Query: 164 EKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQRHFVVHKMIVPGD 223
             + P    +Y+QRG ++   G   EA+++  K I +NP +  A  +R    + +     
Sbjct: 443 IAIKPKFTKAYFQRGIVHREIGDKLEAIKDFSKAIEINPKYASAYYERGKTRYAL----- 497

Query: 224 RERVEQSLKEFRNFVDTHSNVVEACTLFAQVLVDQEDFDGAEEYFNRSIRVDPENASLYV 283
            E+     K+F   ++  S  V+A    A V  D      A + + ++I ++PE+A  YV
Sbjct: 498 NEKAAAK-KDFTKVIELDSRFVDAYIARADVHTDLGYPKQAYDDYEKAIEMNPEDAKAYV 556

Query: 284 HRAMLMLQARGNVDEAIKLIEKAISIDKSCMFAYETLGTIEVQRGRLEEAVKCFNKALPL 343
           HR     Q + +++ AI+   +AI ++ +   AY   G   ++ G+  +A+  ++KA+ L
Sbjct: 557 HRGKYRFQMK-DIEGAIENYNQAIKLNSTQSTAYNNRGNAYLELGKWNKALADYSKAIEL 615



 Score = 43.9 bits (102), Expect = 0.19,   Method: Compositional matrix adjust.
 Identities = 21/65 (32%), Positives = 36/65 (55%)

Query: 459 KHAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHV 518
           +H   +  KA ADL++A  + P    +Y+QRG ++   G   EA+++  K I +NP +  
Sbjct: 426 RHEIKENRKAIADLNQAIAIKPKFTKAYFQRGIVHREIGDKLEAIKDFSKAIEINPKYAS 485

Query: 519 ARAQR 523
           A  +R
Sbjct: 486 AYYER 490



 Score = 42.4 bits (98), Expect = 0.60,   Method: Compositional matrix adjust.
 Identities = 25/80 (31%), Positives = 40/80 (50%)

Query: 460 HAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVA 519
           +   +F  A  D ++A K++P  AD+YY RG       +  +A+ +L++ IA+ P F  A
Sbjct: 393 YLVGEFNGAIIDYNQAIKLNPEYADAYYGRGLARHEIKENRKAIADLNQAIAIKPKFTKA 452

Query: 520 RAQRHFVWTSTLAELMAFSD 539
             QR  V      +L A  D
Sbjct: 453 YFQRGIVHREIGDKLEAIKD 472



 Score = 41.2 bits (95), Expect = 1.3,   Method: Compositional matrix adjust.
 Identities = 45/204 (22%), Positives = 91/204 (44%), Gaps = 17/204 (8%)

Query: 151 SDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQ 210
            ++ K+  D   A + +P  A++YY R     L G++  A+ + ++ I LNP +  A   
Sbjct: 362 GNYEKSQQDSSAAIRNNPQDANAYYDRAFSLYLVGEFNGAIIDYNQAIKLNPEYADAYYG 421

Query: 211 RHFVVHKMIVPGDRERVEQSLKEFRNFVDTHSNVVEACTLFAQVLVDQEDFDGAEEY--F 268
           R    H++      +   +++ +    +       +A   F + +V +E  D  E    F
Sbjct: 422 RGLARHEI------KENRKAIADLNQAIAIKPKFTKAY--FQRGIVHREIGDKLEAIKDF 473

Query: 269 NRSIRVDPENASLYVHRAMLMLQARGNVDE---AIKLIEKAISIDKSCMFAYETLGTIEV 325
           +++I ++P+ AS Y  R     + R  ++E   A K   K I +D   + AY     +  
Sbjct: 474 SKAIEINPKYASAYYERG----KTRYALNEKAAAKKDFTKVIELDSRFVDAYIARADVHT 529

Query: 326 QRGRLEEAVKCFNKALPLARDEAE 349
             G  ++A   + KA+ +  ++A+
Sbjct: 530 DLGYPKQAYDDYEKAIEMNPEDAK 553



 Score = 40.0 bits (92), Expect = 2.9,   Method: Compositional matrix adjust.
 Identities = 36/150 (24%), Positives = 62/150 (41%), Gaps = 14/150 (9%)

Query: 82  RHCTEEIESTSSNHTKAL--------ARLLRATVYIFTSQSTKAIEDLTQLVEDTSVDPK 133
           R+   E  +   + TK +        A + RA V+       +A +D  + +E    D K
Sbjct: 494 RYALNEKAAAKKDFTKVIELDSRFVDAYIARADVHTDLGYPKQAYDDYEKAIEMNPEDAK 553

Query: 134 IKVNAHIKRAVVHLHAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRN 193
               A++ R         D   A  + ++A K++   + +Y  RG  Y   G++ +AL +
Sbjct: 554 ----AYVHRGKYRFQM-KDIEGAIENYNQAIKLNSTQSTAYNNRGNAYLELGKWNKALAD 608

Query: 194 LDKTIALNPNFHVARAQRHFVVHKMI-VPG 222
             K I LNP +  A   R  +   +  VPG
Sbjct: 609 YSKAIELNPEYASAYYNRGLLRTDLAKVPG 638


>gi|145484458|ref|XP_001428239.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
 gi|124395323|emb|CAK60841.1| unnamed protein product [Paramecium tetraurelia]
          Length = 571

 Score = 75.1 bits (183), Expect = 8e-11,   Method: Compositional matrix adjust.
 Identities = 93/442 (21%), Positives = 195/442 (44%), Gaps = 56/442 (12%)

Query: 138 AHIKRAVVHLHAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKT 197
           AH  R ++  HA      AF + ++A ++ P   ++++QR ++     +  +AL N +K+
Sbjct: 153 AHYYRGLI-FHALGKHMDAFLEFNQAVEIRPTSTEAFFQRAELLLDMNRNLDALENYNKS 211

Query: 198 IALNPNFHVARAQRHFVVHKMIVPGDRERVEQSLKEFRNFVDTHS----NVVEACTLFAQ 253
           I ++P     RAQ +    K++     E  E+++  F   ++ +S    N V    LF  
Sbjct: 212 IEIDP----KRAQSYKRRGKLL--KQMENYEEAIINFNQAIELNSGFANNYVNRGLLFKA 265

Query: 254 VLVDQEDFDGAEEYFNRSIRVDPENASLYVHRAMLMLQARGNVDEAIKLIEKAISIDKSC 313
           +   Q+    A E ++ +I ++P+    Y +R  ++ Q     D+A+  + K + ++   
Sbjct: 266 LNEKQK----ALEDYDLAISINPKFIKAYKNRGTILFQEINQNDKALSDLNKILELNPKD 321

Query: 314 MFAYETLGTIEVQRGRLEEAVKCFNKALPLARDEAELSHIYSLRDAAIAQMK----VCER 369
           ++ +     +    G  E+A++ + KA+ +  DE E    Y  R     Q+       + 
Sbjct: 322 IYTHIQRANLLQLLGCTEQALQDYTKAIDINPDETE---NYCKRADLYKQLGQTDLAMKD 378

Query: 370 YNIKKKVSPRSQNITKNEKLAIKQLRENNDII--------IRPADKGGKTVVMDKADYTQ 421
           Y+   +++P++ N   N+ +  ++L++    I        + P D+      M ++D   
Sbjct: 379 YDKVLEINPKNSNGYWNKAIIFEELKQYEPAIAFLTGFIQLNPLDENA---YMKRSD--- 432

Query: 422 KMTSILNSNDYEIIPGDPTKTIEESEKYGNLENESGQKHAASDFT--------KAFADLD 473
            +  ++N  D  +   D  K IE + K     N    ++ A  F         K F DL+
Sbjct: 433 -LYKLVNQLDKAL--DDQQKIIEINPK-----NRFKFEYFAVAFLFKEMNEIEKTFQDLN 484

Query: 474 EAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQRHFVWTSTLAE 533
              ++ PN  ++Y+ RG +Y    Q ++A++N  K I ++P   +    R  ++      
Sbjct: 485 RILEIKPNNINTYFIRGNLYKDLNQDDQAIQNFSKIIEIDPTHFIVFYNRAKIYQKLQQN 544

Query: 534 LMAFSDEF----MIPKITYYIL 551
            +A  D      + P+IT+ ++
Sbjct: 545 DLALQDLNKAVELNPQITFTLI 566



 Score = 50.8 bits (120), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 28/119 (23%), Positives = 58/119 (48%), Gaps = 3/119 (2%)

Query: 100 ARLLRATVYIFTSQSTKAIEDLTQLVEDTSVDPKIKVNAHIKRAVVHLHAASDFTKAFAD 159
           A + R+ +Y   +Q  KA++D  +++E   ++PK +               ++  K F D
Sbjct: 426 AYMKRSDLYKLVNQLDKALDDQQKIIE---INPKNRFKFEYFAVAFLFKEMNEIEKTFQD 482

Query: 160 LDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQRHFVVHKM 218
           L+   ++ PN  ++Y+ RG +Y    Q ++A++N  K I ++P   +    R  +  K+
Sbjct: 483 LNRILEIKPNNINTYFIRGNLYKDLNQDDQAIQNFSKIIEIDPTHFIVFYNRAKIYQKL 541



 Score = 45.1 bits (105), Expect = 0.096,   Method: Compositional matrix adjust.
 Identities = 50/256 (19%), Positives = 115/256 (44%), Gaps = 14/256 (5%)

Query: 67  KAKRAFEHEDYLTAIRHCTEEIESTSSNHTKALARLLRATVYIFTSQSTKAIEDLTQLVE 126
           + K   + E+Y  AI +  + IE  S      + R     ++   ++  KA+ED    + 
Sbjct: 225 RGKLLKQMENYEEAIINFNQAIELNSGFANNYVNR---GLLFKALNEKQKALEDYDLAI- 280

Query: 127 DTSVDPKIKVNAHIKRAVVHLHAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQ 186
             S++PK  + A+  R  +     +   KA +DL++  +++P    ++ QR  +  L G 
Sbjct: 281 --SINPKF-IKAYKNRGTILFQEINQNDKALSDLNKILELNPKDIYTHIQRANLLQLLGC 337

Query: 187 YEEALRNLDKTIALNPNFHVARAQRHFVVHKMIVPGDRERVEQSLKEFRNFVDTHSNVVE 246
            E+AL++  K I +NP+      +R  +  ++       + + ++K++   ++ +     
Sbjct: 338 TEQALQDYTKAIDINPDETENYCKRADLYKQL------GQTDLAMKDYDKVLEINPKNSN 391

Query: 247 ACTLFAQVLVDQEDFDGAEEYFNRSIRVDPENASLYVHRAMLMLQARGNVDEAIKLIEKA 306
                A +  + + ++ A  +    I+++P + + Y+ R+ L  +    +D+A+   +K 
Sbjct: 392 GYWNKAIIFEELKQYEPAIAFLTGFIQLNPLDENAYMKRSDLY-KLVNQLDKALDDQQKI 450

Query: 307 ISIDKSCMFAYETLGT 322
           I I+    F +E    
Sbjct: 451 IEINPKNRFKFEYFAV 466


>gi|428315210|ref|YP_007113092.1| Tetratricopeptide TPR_2 repeat-containing protein [Oscillatoria
           nigro-viridis PCC 7112]
 gi|428238890|gb|AFZ04676.1| Tetratricopeptide TPR_2 repeat-containing protein [Oscillatoria
           nigro-viridis PCC 7112]
          Length = 1363

 Score = 75.1 bits (183), Expect = 8e-11,   Method: Compositional matrix adjust.
 Identities = 60/202 (29%), Positives = 99/202 (49%), Gaps = 12/202 (5%)

Query: 167 DPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQRHFVVHKMIVPGDRER 226
           +PN+ + Y   G +Y    Q+E+A+ + +K I+L P+F  A  Q   V  ++     RE 
Sbjct: 75  NPNLPEVYANLGILYSQGKQWEKAIAHCEKAISLAPHFAAAYRQLARVWTQL---EKREE 131

Query: 227 VEQSLKEFRNFVDTHSNVVEACTLFAQVLVDQEDFDGAEEYFNRSIRVDPENASLYVHRA 286
                 +  N     +   E  TL     V+    D A E ++R+I+++P+ A+ Y H  
Sbjct: 132 AADFWYQAFNIEPNWATAEEHVTL-GNSFVELGKCDRAMECYSRAIKLNPQLATAY-HNL 189

Query: 287 MLMLQARGNVDEAIKLIEKAISIDKSCMFAYETLGTIEVQRGRLEEAVKCFNKALPL--- 343
             ML      DEAI    +AI+I+ +   +Y +LG    +RG L  A+ C+NK+L L   
Sbjct: 190 GEMLVREKRWDEAIANYRQAIAINPNSFESYHSLGKTWAERGELNRAIACYNKSLELNPN 249

Query: 344 -ARDEAELSHIYSLR---DAAI 361
            AR    L ++++ +   DAAI
Sbjct: 250 YARAYVGLGNVFAQKRDFDAAI 271



 Score = 62.8 bits (151), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 42/184 (22%), Positives = 89/184 (48%), Gaps = 9/184 (4%)

Query: 162 EAEKVDPN--VADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQRHFVVHKMI 219
           +A  ++PN   A+ +   G  +   G+ + A+    + I LNP    A    +  + +M+
Sbjct: 138 QAFNIEPNWATAEEHVTLGNSFVELGKCDRAMECYSRAIKLNPQLATA----YHNLGEML 193

Query: 220 VPGDRERVEQSLKEFRNFVDTHSNVVEACTLFAQVLVDQEDFDGAEEYFNRSIRVDPENA 279
           V    +R ++++  +R  +  + N  E+     +   ++ + + A   +N+S+ ++P  A
Sbjct: 194 V--REKRWDEAIANYRQAIAINPNSFESYHSLGKTWAERGELNRAIACYNKSLELNPNYA 251

Query: 280 SLYVHRAMLMLQARGNVDEAIKLIEKAISIDKSCMFAYETLGTIEVQRGRLEEAVKCFNK 339
             YV    +  Q R + D AIK   + + I+ +  +AY  LG    Q+ + +EA+ C+ K
Sbjct: 252 RAYVGLGNVFAQKR-DFDAAIKCYRQTLEINDNSYWAYNCLGDALAQKQQWQEAIICYRK 310

Query: 340 ALPL 343
           A+ +
Sbjct: 311 AIAI 314



 Score = 60.5 bits (145), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 54/212 (25%), Positives = 95/212 (44%), Gaps = 29/212 (13%)

Query: 163 AEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNF------------------ 204
           A +++PN + SY+  G+ +    +++EA     K I LNP+F                  
Sbjct: 758 AIELNPNFSWSYHFLGETWQAMEEHDEAAAAYRKAIELNPDFCWTYNNLGDVLMELSEWE 817

Query: 205 HVARAQRHFVVHKMIVPGDRERVEQSLKEFRNFVDTHSNVVEA-------CTLF---AQV 254
             A A R  V          ER+ ++L    N  +  +   +A       C L+    +V
Sbjct: 818 DAAVAYRKLVELNPDFCWSYERLGKALVALENLEEAAAAYRKAIELNPDDCWLYNSLGEV 877

Query: 255 LVDQEDFDGAEEYFNRSIRVDPENASLYVHRAMLMLQARGNVDEAIKLIEKAISIDKSCM 314
           L  QE++  A   F R+I ++PE++ LY  +    L+ +G ++ AI + EK I++D    
Sbjct: 878 LESQENWPEAAVAFGRAIALEPEHSWLY-KKLGDALRNQGELERAIAIYEKGINLDPKSC 936

Query: 315 FAYETLGTIEVQRGRLEEAVKCFNKALPLARD 346
           + YE LG   + + + E A+    +AL +  D
Sbjct: 937 WCYEGLGLSLMAKQQWEPAIANLVQALQIKPD 968



 Score = 45.4 bits (106), Expect = 0.074,   Method: Compositional matrix adjust.
 Identities = 55/282 (19%), Positives = 123/282 (43%), Gaps = 42/282 (14%)

Query: 243 NVVEACTLFAQVLVDQEDFDGAEEYFNRSIRVDPENASLYVHRAMLMLQARGNVDEAIKL 302
           N+  AC    +V+  + + + A++++  +I  +P    +Y +  +L  Q +   ++AI  
Sbjct: 43  NLGAACQTLGKVMQVRGEIEQAKQWYEAAIDRNPNLPEVYANLGILYSQGK-QWEKAIAH 101

Query: 303 IEKAISIDKSCMFAYETLGTIEVQRGRLEEAVKCFNKALPLARDEAELSHIYSLRDAAIA 362
            EKAIS+      AY  L  +  Q  + EEA   + +A  +  + A      +L ++ + 
Sbjct: 102 CEKAISLAPHFAAAYRQLARVWTQLEKREEAADFWYQAFNIEPNWATAEEHVTLGNSFV- 160

Query: 363 QMKVCER----YNIKKKVSPRSQNITKN-EKLAIKQLRENNDIIIRPADKGGKTVVMDKA 417
           ++  C+R    Y+   K++P+      N  ++ +++ R +  I                A
Sbjct: 161 ELGKCDRAMECYSRAIKLNPQLATAYHNLGEMLVREKRWDEAI----------------A 204

Query: 418 DYTQKMTSILNSNDYEIIPGDPTKTIEESEKYGNLENESGQKHAASDFTKAFADLDEAEK 477
           +Y Q +   +N N +E               Y +L     ++    +  +A A  +++ +
Sbjct: 205 NYRQAIA--INPNSFE--------------SYHSLGKTWAER---GELNRAIACYNKSLE 245

Query: 478 VDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVA 519
           ++PN A +Y   G ++     ++ A++   +T+ +N N + A
Sbjct: 246 LNPNYARAYVGLGNVFAQKRDFDAAIKCYRQTLEINDNSYWA 287



 Score = 44.3 bits (103), Expect = 0.16,   Method: Compositional matrix adjust.
 Identities = 37/175 (21%), Positives = 80/175 (45%), Gaps = 7/175 (4%)

Query: 153 FTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQRH 212
           + +A A+  +A  ++PN  +SY+  G+ +   G+   A+   +K++ LNPN+  ARA   
Sbjct: 199 WDEAIANYRQAIAINPNSFESYHSLGKTWAERGELNRAIACYNKSLELNPNY--ARA--- 253

Query: 213 FVVHKMIVPGDRERVEQSLKEFRNFVDTHSNVVEACTLFAQVLVDQEDFDGAEEYFNRSI 272
             V    V   +   + ++K +R  ++ + N   A       L  ++ +  A   + ++I
Sbjct: 254 -YVGLGNVFAQKRDFDAAIKCYRQTLEINDNSYWAYNCLGDALAQKQQWQEAIICYRKAI 312

Query: 273 RVDPENASLYVHRAMLMLQARGNVDEAIKLIEKAISIDKSCMFAYETLGTIEVQR 327
            ++      YV+   + L    + DEA+     A+ ++ +     + LG +  +R
Sbjct: 313 AINQNIPWFYVNLG-IALTCEQSWDEAVSAYLHAVQLEPNLTGINQRLGYVLRKR 366



 Score = 40.0 bits (92), Expect = 3.1,   Method: Compositional matrix adjust.
 Identities = 41/177 (23%), Positives = 79/177 (44%), Gaps = 15/177 (8%)

Query: 186 QYEEALRNLDKTIALNPNFHVARAQRHFVVHKMIVPGDRERVEQSLKEFRNFVDTHSNVV 245
           Q +EA       I LNPNF  +    HF+          E  +++   +R  ++ + +  
Sbjct: 747 QLDEARAAYQGAIELNPNFSWSY---HFLGETWQA---MEEHDEAAAAYRKAIELNPDFC 800

Query: 246 EACTLFAQVLVDQEDFDGAEEYFNRSIRVDPENASLY--VHRAMLMLQARGNVDEAIKLI 303
                   VL++  +++ A   + + + ++P+    Y  + +A++ L+   N++EA    
Sbjct: 801 WTYNNLGDVLMELSEWEDAAVAYRKLVELNPDFCWSYERLGKALVALE---NLEEAAAAY 857

Query: 304 EKAISIDKSCMFAYETLGTIEVQRGRLEEAVKCFNKALPLARDEAELSHIY-SLRDA 359
            KAI ++    + Y +LG +   +    EA   F +A+ L   E E S +Y  L DA
Sbjct: 858 RKAIELNPDDCWLYNSLGEVLESQENWPEAAVAFGRAIAL---EPEHSWLYKKLGDA 911



 Score = 39.7 bits (91), Expect = 3.9,   Method: Compositional matrix adjust.
 Identities = 44/187 (23%), Positives = 73/187 (39%), Gaps = 10/187 (5%)

Query: 166 VDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQRHFVVHKMIVPG--- 222
           ++ N+   Y   G        ++EA+      + L PN      +  +V+ K    G   
Sbjct: 314 INQNIPWFYVNLGIALTCEQSWDEAVSAYLHAVQLEPNLTGINQRLGYVLRKRSESGLDS 373

Query: 223 ------DRERVEQSLKEFRNFVDTHSNVVEACTLFAQVLVDQEDFDGAEEYFNRSIRVDP 276
                     V  S K + N +    +  E        L  Q+  +GA  +++ +++++P
Sbjct: 374 TIATYCQAIEVLASGKIYHNLLGIELDGAEFYINLGNSLAKQKQLEGAIVFYSMAVQIEP 433

Query: 277 ENASLYVHRAMLMLQARGNVDEAIKLIEKAISIDKSCMFAYETLGTIEVQRGRLEEAVKC 336
            NA+  V +   +   +  +   I      I ID S   AY  LG I  Q G LEEA+ C
Sbjct: 434 -NAAEVVAQLNDVRAKQQELYAQIAAYRHQIEIDPSNSKAYNDLGNILPQLGELEEAIIC 492

Query: 337 FNKALPL 343
             KA  L
Sbjct: 493 HQKASKL 499


>gi|448536484|ref|XP_003871125.1| Tom70 protein [Candida orthopsilosis Co 90-125]
 gi|380355481|emb|CCG25000.1| Tom70 protein [Candida orthopsilosis]
          Length = 601

 Score = 75.1 bits (183), Expect = 9e-11,   Method: Compositional matrix adjust.
 Identities = 75/306 (24%), Positives = 136/306 (44%), Gaps = 20/306 (6%)

Query: 68  AKRAFEHEDYLTAIRHCTEEIESTSSNHTKALARLLRATVYIFTSQSTKAIEDLTQLVED 127
           A+  +E  D  T I      +E  +S        L  A+ + F         DL  + + 
Sbjct: 289 ARDGYEEAD--TLINQAVSALEEDASKKDTYAIALEYASAFQFLKNDPTTAADL--INKS 344

Query: 128 TSVDPKIKVNAHIKRAVVHLHAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQY 187
            S+ P+ +  A++ RA+++   +S + +A  D   AEK+DPN  D YY  GQ++ L G  
Sbjct: 345 LSIQPRPR--AYVFRALINADKSS-YDEALKDFKLAEKLDPNSPDIYYHLGQLHYLTGDL 401

Query: 188 EEALRNLDKTIALNPNFHVARAQRHFVVHKMIVPGDRERVEQSLKEFRNFVDTHSNVVEA 247
             A  N  K  +LNP+   A  Q   + +K    G ++   +   E +    T     E 
Sbjct: 402 TNAEVNFKKAKSLNPDNVYAYIQLACIAYKN---GQQDDANEKFTEAKLKFPTSP---EI 455

Query: 248 CTLFAQVLVDQEDFDGAEEYFNRSIRVDPE------NASLYVHRAMLM-LQARGNVDEAI 300
              + ++L D+ D D A   F+ S R+  +       A   +++A ++  ++   +D+A 
Sbjct: 456 PNYYGEILADKGDVDSALRQFDISARLQEKLDRFSVGALPLINKATVISRESLERIDDAE 515

Query: 301 KLIEKAISIDKSCMFAYETLGTIEVQRGRLEEAVKCFNKALPLARDEAELSHIYSLRDAA 360
            L+ KA  +D     A  +L  I++Q+  +++A+  F ++  LAR   E     S  +A 
Sbjct: 516 SLLTKACELDPKSELARISLAQIKLQKDEVDDAITLFEESCDLARSIEEKIQAISFAEAT 575

Query: 361 IAQMKV 366
             Q ++
Sbjct: 576 KMQKRI 581



 Score = 43.5 bits (101), Expect = 0.31,   Method: Compositional matrix adjust.
 Identities = 22/53 (41%), Positives = 29/53 (54%)

Query: 463 SDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPN 515
           S + +A  D   AEK+DPN  D YY  GQ++ L G    A  N  K  +LNP+
Sbjct: 365 SSYDEALKDFKLAEKLDPNSPDIYYHLGQLHYLTGDLTNAEVNFKKAKSLNPD 417


>gi|445064286|ref|ZP_21376363.1| hypothetical protein H263_12694 [Brachyspira hampsonii 30599]
 gi|444504339|gb|ELV05024.1| hypothetical protein H263_12694 [Brachyspira hampsonii 30599]
          Length = 352

 Score = 75.1 bits (183), Expect = 9e-11,   Method: Compositional matrix adjust.
 Identities = 72/265 (27%), Positives = 122/265 (46%), Gaps = 45/265 (16%)

Query: 110 FTSQSTKAIEDLTQLVEDTS--VDPKIKVNAHIKRAVVHLH----------AASDFTKAF 157
           F  +  K I D   L+   +  VD K KV+      +   H          A   + +A 
Sbjct: 59  FNEELNKIISDKIYLIGSFTNIVDNKKKVDIDSLNILTDYHDYNSKGIYKSANGQYLEAI 118

Query: 158 ADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQRHFVVHK 217
              DEA K++PN+AD+YY +G      G  +EA+   +K I L  ++  A   R      
Sbjct: 119 KYYDEAIKLNPNMADAYYNKGIAKTKLGFLKEAIEEYNKAIELRADYTDAYYNRG----- 173

Query: 218 MIVPGDRERVEQSLKEFR-------NFVDTHSN--VVE-ACTLFAQVLVDQEDFDGAEEY 267
            ++  D   +E+++K+F        N  D + N  V+E    LF + + D          
Sbjct: 174 -LLKSDLGLLEEAIKDFDKALSIDPNLFDAYHNKGVLENELGLFKEAIKD---------- 222

Query: 268 FNRSIRVDPENASLYVHRAMLMLQARGNV---DEAIKLIEKAISIDKSCMFAYETLGTIE 324
           FN++I++  ++A +Y +R      ++ N+   +E+IK  +KAI ++ +  FAY   G  +
Sbjct: 223 FNKAIKIADDDAVIYNNRG----NSKYNLELYEESIKDYDKAIKLNPNYAFAYNNRGNAK 278

Query: 325 VQRGRLEEAVKCFNKALPLARDEAE 349
              G  EEA+K F+KA+ L  D A+
Sbjct: 279 DNLGLYEEAIKDFDKAIKLNPDYAD 303



 Score = 65.9 bits (159), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 68/264 (25%), Positives = 113/264 (42%), Gaps = 36/264 (13%)

Query: 264 AEEYFNRSIRVDPENASLYVHRAMLMLQARGNVDEAIKLIEKAISIDKSCMFAYETLGTI 323
           A +Y++ +I+++P  A  Y ++ +   +  G + EAI+   KAI +      AY   G +
Sbjct: 117 AIKYYDEAIKLNPNMADAYYNKGIAKTKL-GFLKEAIEEYNKAIELRADYTDAYYNRGLL 175

Query: 324 EVQRGRLEEAVKCFNKALPLARDEAELSHIYSLRDAAIAQMKVCERYNIKKKVSPRSQNI 383
           +   G LEEA+K F+KAL +  +  +  H                           ++ +
Sbjct: 176 KSDLGLLEEAIKDFDKALSIDPNLFDAYH---------------------------NKGV 208

Query: 384 TKNEKLAIKQLRENNDIIIRPADKGGKTVVMDKADYTQKMTSILNSNDYEIIPGDPTKTI 443
            +NE    K+        I+  +K  K    D   Y  +  S  N   YE    D  K I
Sbjct: 209 LENELGLFKE-------AIKDFNKAIKIADDDAVIYNNRGNSKYNLELYEESIKDYDKAI 261

Query: 444 EESEKYGNLENESGQ-KHAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEA 502
           + +  Y    N  G  K     + +A  D D+A K++P+ AD+Y  RG      G YEEA
Sbjct: 262 KLNPNYAFAYNNRGNAKDNLGLYEEAIKDFDKAIKLNPDYADAYNNRGYSKENLGLYEEA 321

Query: 503 LRNLDKTIALNPNFHVARAQRHFV 526
           L++  K + L+PN   A+    ++
Sbjct: 322 LKDYKKALKLDPNNEYAKENIKYL 345



 Score = 52.0 bits (123), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 40/173 (23%), Positives = 87/173 (50%), Gaps = 7/173 (4%)

Query: 156 AFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQRHFVV 215
           A  D D+A  +DPN+ D+Y+ +G +    G ++EA+++ +K I +  +  V    R    
Sbjct: 185 AIKDFDKALSIDPNLFDAYHNKGVLENELGLFKEAIKDFNKAIKIADDDAVIYNNRGNSK 244

Query: 216 HKMIVPGDRERVEQSLKEFRNFVDTHSNVVEACTLFAQVLVDQEDFDGAEEYFNRSIRVD 275
           + +      E  E+S+K++   +  + N   A         +   ++ A + F+++I+++
Sbjct: 245 YNL------ELYEESIKDYDKAIKLNPNYAFAYNNRGNAKDNLGLYEEAIKDFDKAIKLN 298

Query: 276 PENASLYVHRAMLMLQARGNVDEAIKLIEKAISIDKSCMFAYETLGTIEVQRG 328
           P+ A  Y +R     +  G  +EA+K  +KA+ +D +  +A E +  ++ + G
Sbjct: 299 PDYADAYNNRGYSK-ENLGLYEEALKDYKKALKLDPNNEYAKENIKYLKEEYG 350



 Score = 48.5 bits (114), Expect = 0.010,   Method: Compositional matrix adjust.
 Identities = 34/119 (28%), Positives = 58/119 (48%), Gaps = 11/119 (9%)

Query: 117 AIEDLTQLVEDTSVDPKIKVNAHIKRAVVHLHAASDFTKAFADLDEAEKVDPNVADSYYQ 176
           AI+D  + ++    D  I  N    +  + L+  S       D D+A K++PN A +Y  
Sbjct: 219 AIKDFNKAIKIADDDAVIYNNRGNSKYNLELYEES-----IKDYDKAIKLNPNYAFAYNN 273

Query: 177 RGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQRHFVVHKMIVPGDRERVEQSLKEFR 235
           RG      G YEEA+++ DK I LNP++  A   R +    + +       E++LK+++
Sbjct: 274 RGNAKDNLGLYEEAIKDFDKAIKLNPDYADAYNNRGYSKENLGL------YEEALKDYK 326



 Score = 46.6 bits (109), Expect = 0.030,   Method: Compositional matrix adjust.
 Identities = 34/114 (29%), Positives = 56/114 (49%), Gaps = 6/114 (5%)

Query: 105 ATVYIFTSQSTKAIEDLTQLVEDTSVDPKIKVNAHIKRAVVHLHAASD----FTKAFADL 160
           A +Y     S   +E   + ++D   D  IK+N +   A  +   A D    + +A  D 
Sbjct: 234 AVIYNNRGNSKYNLELYEESIKD--YDKAIKLNPNYAFAYNNRGNAKDNLGLYEEAIKDF 291

Query: 161 DEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQRHFV 214
           D+A K++P+ AD+Y  RG      G YEEAL++  K + L+PN   A+    ++
Sbjct: 292 DKAIKLNPDYADAYNNRGYSKENLGLYEEALKDYKKALKLDPNNEYAKENIKYL 345



 Score = 38.5 bits (88), Expect = 9.7,   Method: Compositional matrix adjust.
 Identities = 22/68 (32%), Positives = 35/68 (51%)

Query: 459 KHAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHV 518
           K A   + +A    DEA K++PN+AD+YY +G      G  +EA+   +K I L  ++  
Sbjct: 108 KSANGQYLEAIKYYDEAIKLNPNMADAYYNKGIAKTKLGFLKEAIEEYNKAIELRADYTD 167

Query: 519 ARAQRHFV 526
           A   R  +
Sbjct: 168 AYYNRGLL 175


>gi|125863608|gb|ABN58645.1| TOM70 [Saccharomyces cerevisiae]
          Length = 617

 Score = 75.1 bits (183), Expect = 9e-11,   Method: Compositional matrix adjust.
 Identities = 87/350 (24%), Positives = 161/350 (46%), Gaps = 35/350 (10%)

Query: 50  ELTNGDTNESHELD---------LLSKAKRAFEHED--YLTAIRHCTEEIESTSSNHT-- 96
           ELT  + +ESHE D         L  ++  +++  D  +  A R   E+++  + +    
Sbjct: 267 ELTFANYDESHEADKELMNGLSNLYKRSPESYDKADESFTKAARLFEEQLDKNNEDEKLK 326

Query: 97  -KALARLLRATVYIF-TSQSTKAIEDLTQLVEDTSVDPKIKVNAHIKRAVVHLHAASDFT 154
            K    L    ++ F  +    A ED+ + +E   + P+  VN++I  A++ +   +D T
Sbjct: 327 EKLAISLEHTGIFKFLKNDPLGAHEDIKKAIE---LFPR--VNSYIYMALI-MADRNDST 380

Query: 155 KAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQRHFV 214
           + +   D+A K+D N +  YY RGQ+  +   Y++A ++ DK   L+P       Q   +
Sbjct: 381 EYYNHFDKALKLDSNNSSVYYHRGQMNFILQNYDQAGKDFDKAKELDPENIFPYIQLACL 440

Query: 215 VHKMIVPGDRERVEQSLKEFRNFVDTHSNVVEACTLFAQVLVDQEDFDGAEEYFNRSIRV 274
            ++     D E +    K  R F +      E    FA++L D+ DFD A + ++ +I +
Sbjct: 441 AYRENKFDDCETLFSEAK--RKFPE----APEVPNFFAEILTDKNDFDKALKQYDLAIEL 494

Query: 275 DPENASLYVHRAMLMLQAR--------GNVDEAIKLIEKAISIDKSCMFAYETLGTIEVQ 326
           + +   +YV  A L+ +A          N  EA  L+EKA  +D     A   L  +++Q
Sbjct: 495 ENKLDGIYVGIAPLVGKATLLTRNPTVENFIEATNLLEKASKLDPRSEQAKIGLAQMKLQ 554

Query: 327 RGRLEEAVKCFNKALPLARDEAELSHIYSLRDAAIAQMKVCERYNIKKKV 376
           +  ++EA+  F ++  LAR   E     +  +AA  Q ++     + KK+
Sbjct: 555 QEDIDEAITLFEESADLARTMEEKLQAITFAEAAKVQQRIRSDPVLAKKI 604


>gi|296127458|ref|YP_003634710.1| hypothetical protein [Brachyspira murdochii DSM 12563]
 gi|296019274|gb|ADG72511.1| TPR repeat-containing protein [Brachyspira murdochii DSM 12563]
          Length = 687

 Score = 75.1 bits (183), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 95/412 (23%), Positives = 184/412 (44%), Gaps = 51/412 (12%)

Query: 104 RATVYIFTSQSTKAIEDLTQLVEDTSVDPKIKVNAHIKRAVVHLHAASDFTKAFADLDEA 163
           RA  Y   +   K+I D T+ +E      K +++A+  RA  +     ++ KA  D ++ 
Sbjct: 207 RALSYSKLNMFDKSIRDYTKAIEIN----KNEIDAYYNRASSYCEI-EEYYKAIEDYNKV 261

Query: 164 EKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQRHFVVHKMIVPGD 223
            +++P+  ++YY R   Y     Y++A+ + DK I LN N       +  V ++ +    
Sbjct: 262 IELNPDDDEAYYNRALTYSKIEAYDKAIEDYDKVIELNHN------DKEAVYNRALCKQS 315

Query: 224 RERVEQSLKEFRNFVDTHSNVVEACTLFAQVLVDQEDFDGAEEYFNRSIRVDPENASLYV 283
               E+++K+F N +  + N+     L     ++ E ++ +   F+  I V+P+ A  Y 
Sbjct: 316 VNLFEEAIKDF-NAIINYDNIFVYYNL-GICYLELERYEESVNNFDLFIEVNPDFADAYY 373

Query: 284 HRAMLMLQARGNVDEAIKLIEKAISIDKSCMFAYETLGTIEVQRGRLEEAVKCFNKALPL 343
           +R        G  DE+I+   K + +D   + AY     ++++    +EA+K F++AL  
Sbjct: 374 YRGNAKY-GLGYYDESIEDYNKTLELDNVYIDAYYERAKVKIELSMYDEAMKDFDEALFY 432

Query: 344 ARDEAELSHIYSLRDAAIAQMKVCERYNIKKKVSPRSQNITKNEKLAIKQLRENNDIIIR 403
              +++ +++Y+L+ A + +        I KK     +N T   +L        N+   +
Sbjct: 433 IESDSDRAYLYTLK-ATLNE--------ISKKYDDAIENYTNAIELG-------NECYYK 476

Query: 404 PA-DKGGKTVVMDKA-DYTQKMTSILNSNDYEIIPGDPTKTIEESEKYGNLENESGQKHA 461
            A  K    ++ D   DY + +   L   +YEI              YG   N     + 
Sbjct: 477 MAIAKHNAGLIKDALNDYNKAIE--LEPYNYEI--------------YGYRGNAELDLYL 520

Query: 462 ASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALN 513
              + +A  D ++A +++PN  ++YY RG        Y+EA R+ + T+ LN
Sbjct: 521 ---YKEAIEDFNKAIELNPNYDEAYYNRGIANEALKNYDEAFRDYETTVKLN 569



 Score = 45.4 bits (106), Expect = 0.076,   Method: Compositional matrix adjust.
 Identities = 85/406 (20%), Positives = 163/406 (40%), Gaps = 47/406 (11%)

Query: 148 HAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVA 207
           H   ++ +A    ++  ++D +  D YY RG        YE A+ +  K + +NPN   A
Sbjct: 75  HNLKNYNEAIEYFNKTLELDSSFFDVYYSRGVAEYHLKFYENAVSDFTKALEVNPNLQNA 134

Query: 208 RAQRHFVV-----HKMIVPGDRERVEQSLKE-------FRNFVDTHSNVVEACTLFAQVL 255
              R         HK  +  D + +  S  E       +R     H N+ E         
Sbjct: 135 YYIRALCYAKINKHKKAIE-DFDTLLNSFDEINYIYYYYRGLSKFHLNLFEEAV------ 187

Query: 256 VDQEDFDGAEEYFNRSIRVDPENASLYVHRAMLMLQARGNVDEAIKLIEKAISIDKSCMF 315
              +DFD A  Y        P    +Y  RA L        D++I+   KAI I+K+ + 
Sbjct: 188 ---KDFDIAAYYL-------PNEGYIYYDRA-LSYSKLNMFDKSIRDYTKAIEINKNEID 236

Query: 316 AYETLGTIEVQRGRLEEAVKCFNKALPLARDEAELSHIYSLRDAAI-AQMKVCERYNIKK 374
           AY    +   +     +A++ +NK + L  D+ E  +  +L  + I A  K  E Y+   
Sbjct: 237 AYYNRASSYCEIEEYYKAIEDYNKVIELNPDDDEAYYNRALTYSKIEAYDKAIEDYDKVI 296

Query: 375 KVSPRSQNITKNEKLAIKQLRENNDIIIRPADKGGKTVVMDKADYTQKMTSI--LNSNDY 432
           +++   +    N  L  + +      +   A K    ++     +      I  L    Y
Sbjct: 297 ELNHNDKEAVYNRALCKQSVN-----LFEEAIKDFNAIINYDNIFVYYNLGICYLELERY 351

Query: 433 EIIPGDPTKTIEESEKYGNLENESGQ-KHAASDFTKAFADLDEAEKVDPNVADSYYQRGQ 491
           E    +    IE +  + +     G  K+    + ++  D ++  ++D    D+YY+R +
Sbjct: 352 EESVNNFDLFIEVNPDFADAYYYRGNAKYGLGYYDESIEDYNKTLELDNVYIDAYYERAK 411

Query: 492 IYCLFGQYEEALRNLDKTIALNPNFHV-ARAQRHFVWT--STLAEL 534
           +      Y+EA+++ D+ +     F++ + + R +++T  +TL E+
Sbjct: 412 VKIELSMYDEAMKDFDEAL-----FYIESDSDRAYLYTLKATLNEI 452



 Score = 44.3 bits (103), Expect = 0.17,   Method: Compositional matrix adjust.
 Identities = 59/263 (22%), Positives = 113/263 (42%), Gaps = 24/263 (9%)

Query: 55  DTNESHELD------LLSKAKRAFEHEDYLTAIRHCTEEIESTSSNHTKALARLLRATVY 108
           D N++ ELD         +AK   E   Y  A++   E +    S+  +A    L+AT+ 
Sbjct: 391 DYNKTLELDNVYIDAYYERAKVKIELSMYDEAMKDFDEALFYIESDSDRAYLYTLKATLN 450

Query: 109 IFTSQSTKAIEDLTQLVEDTSVDPKIKVNAHIKRAVVHLHAASDFTKAFADLDEAEKVDP 168
             + +   AIE+ T  +E       +    + K A+   H A     A  D ++A +++P
Sbjct: 451 EISKKYDDAIENYTNAIE-------LGNECYYKMAIAK-HNAGLIKDALNDYNKAIELEP 502

Query: 169 NVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQRHFVVHKMIVPGDRERVE 228
              + Y  RG        Y+EA+ + +K I LNPN+  A   R       I     +  +
Sbjct: 503 YNYEIYGYRGNAELDLYLYKEAIEDFNKAIELNPNYDEAYYNRG------IANEALKNYD 556

Query: 229 QSLKEFRNFVDTHSNVVEACTLFAQVLVDQEDFDGAEEYFNRSIRVDPENA----SLYVH 284
           ++ +++   V  +     A        V  +++D A E F +++ ++ E A    ++   
Sbjct: 557 EAFRDYETTVKLNHKHDYAFNNLGSCYVKLKEYDKALENFYKALEINSELAIPTNNIGEV 616

Query: 285 RAMLMLQARGNVDEAIKLIEKAI 307
           ++ L L+ + N++   KL  +A+
Sbjct: 617 KSRLALKEKNNIENYNKLNSEAL 639



 Score = 40.4 bits (93), Expect = 2.3,   Method: Compositional matrix adjust.
 Identities = 23/75 (30%), Positives = 37/75 (49%)

Query: 465 FTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQRH 524
           F K+  D  +A +++ N  D+YY R   YC   +Y +A+ + +K I LNP+   A   R 
Sbjct: 217 FDKSIRDYTKAIEINKNEIDAYYNRASSYCEIEEYYKAIEDYNKVIELNPDDDEAYYNRA 276

Query: 525 FVWTSTLAELMAFSD 539
             ++   A   A  D
Sbjct: 277 LTYSKIEAYDKAIED 291


>gi|145483305|ref|XP_001427675.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
 gi|124394757|emb|CAK60277.1| unnamed protein product [Paramecium tetraurelia]
          Length = 777

 Score = 75.1 bits (183), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 91/373 (24%), Positives = 174/373 (46%), Gaps = 22/373 (5%)

Query: 147 LHAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHV 206
           L+  ++  ++    D+A +++PN A  YY +G       +YEE++   DK I LNPN   
Sbjct: 410 LYNLNNNEESIIKYDKAIELNPNNAKYYYSKGNALYNSKKYEESIIEYDKAIELNPNDAE 469

Query: 207 ARAQRHFVVHKMIVPGDRERVEQSLKEFRNFVDTHSNVVEACTLFAQVLVDQEDFDGAEE 266
               + + ++++       + E+S+ EF   ++ + N  +        L +Q+ ++ +  
Sbjct: 470 YYNSKGYALYELY------KYEESIIEFDKAIELNPNYDDYYNSKGNALCNQKKYEESII 523

Query: 267 YFNRSIRVDPENASLYVHRAMLMLQARGNVDEAIKLIEKAISIDKSCMFAYETLGTIEVQ 326
            ++++I ++P N   Y +R +L    +   +E+I   +KAI ++ +    Y + G    +
Sbjct: 524 EYDKAIELNP-NYDDYYNRNVLWNLKK--YEESIIEYDKAIELNTNYDDYYNSKGLALQE 580

Query: 327 RGRLEEAVKCFNKALPLARDEAELSHIYSLRDAAIAQMKVCER----YNIKKKVSPRSQN 382
             + EE++  F+KA+ L  +    S  Y  +  A+  +K  E     Y+   ++ P S +
Sbjct: 581 LYKYEESIIEFDKAIELNHN---YSQYYCNKGQALYNLKKYEESIKEYDKAIELKP-SYD 636

Query: 383 ITKNEK-LAIKQLRENNDIIIRPADKGGKTVVMDKADYTQKMTSILNSNDYEIIPGDPTK 441
           +  N K  A+  L++  + II   DK  K        Y  K    L   +  II  D  K
Sbjct: 637 VYYNRKGQALYYLKKYEESIIE-FDKAIKLNPNYDDYYNSKALYNLKKYEESIIEFD--K 693

Query: 442 TIEESEKYGNLENESGQK-HAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYE 500
            I+ +  Y +  N  GQ  +    + ++  + D+A K++PN  D Y  +GQ      +YE
Sbjct: 694 AIKLNPNYDDYYNSKGQALYYLKKYEESIIEFDKAIKLNPNYDDYYNSKGQALYNLKKYE 753

Query: 501 EALRNLDKTIALN 513
           E+++  DK I LN
Sbjct: 754 ESIKEYDKAIELN 766



 Score = 68.9 bits (167), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 104/428 (24%), Positives = 186/428 (43%), Gaps = 49/428 (11%)

Query: 136 VNAHIKRAVVHLHAA----SDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEAL 191
           +N  IK ++  L  A    + F +A  ++D+A +++PN    Y  +G       +YEE++
Sbjct: 133 INKGIKTSLQILAKALMKINKFEEAIYEIDKAIQLNPNDPICYNMKGNSLQSLYKYEESI 192

Query: 192 RNLDKTIAL---NPNFHVARAQRHFVVHKM------IVPGDR-ERVEQSLKEFRNFVDTH 241
              +K I L   N N+H  +A+    +H++      ++  D+  +V Q+  E   F    
Sbjct: 193 TEYEKAIQLDSSNSNYHQNKAK---ALHQLKDYEEEVIEHDKILKVTQNNPEKEIFTSIK 249

Query: 242 SNVVEACTLFAQV---LVDQEDFDGAEEYFNRSIRVDPENASLYVHRAM--------LML 290
           +       LF ++   L   E+++ +    ++ I  +P NA+ Y ++ +        L+L
Sbjct: 250 A-------LFNKLGNQLYKYEEYEQSIIQVDKEIEQNPTNANSYYNKGINIRLYHIGLLL 302

Query: 291 QARGNVDEAIKLIEKAISIDKSCMFAYETLGTIEVQRGRLEEAVKCFNKALPL-ARDEAE 349
           Q     DE+I   +KAI I+ +    Y   G +  Q  + EE++  +N A+ L  +    
Sbjct: 303 QDLKMFDESIIQFKKAIEINPNNAMYYNKKGDVLCQIHKYEESIIEYNMAIQLNPKSPTY 362

Query: 350 LSH----IYSLRDAAIAQMKVCE-RYNIKKKVSPRSQNITKNE-KLAIKQLRENNDIIIR 403
             H    +     + I   K  E   N    ++ +  NI  N     +  L  N + II+
Sbjct: 363 YFHKGKALLKCNKSIIEFEKGIELNLNEANYLNKKGLNIQTNYLGFPLYNLNNNEESIIK 422

Query: 404 PADKGGKTVVMDKADYTQKMTSILNSNDYE--IIPGDPTKTIEESEKYGNLENESGQK-H 460
             DK  +    +   Y  K  ++ NS  YE  II  D  K IE +       N  G   +
Sbjct: 423 -YDKAIELNPNNAKYYYSKGNALYNSKKYEESIIEYD--KAIELNPNDAEYYNSKGYALY 479

Query: 461 AASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVAR 520
               + ++  + D+A +++PN  D Y  +G   C   +YEE++   DK I LNPN+    
Sbjct: 480 ELYKYEESIIEFDKAIELNPNYDDYYNSKGNALCNQKKYEESIIEYDKAIELNPNYD-DY 538

Query: 521 AQRHFVWT 528
             R+ +W 
Sbjct: 539 YNRNVLWN 546



 Score = 65.1 bits (157), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 114/500 (22%), Positives = 211/500 (42%), Gaps = 82/500 (16%)

Query: 73  EHEDYLTAIRHCTEEIESTSSNHTKALARLLRATVYIFTSQSTKAIEDLTQLVEDTSVDP 132
           EH+  L   ++  E+   TS    KAL   L   +Y +  +  ++I  + + +E    + 
Sbjct: 228 EHDKILKVTQNNPEKEIFTS---IKALFNKLGNQLYKY-EEYEQSIIQVDKEIEQNPTNA 283

Query: 133 KIKVNAHIKRAVVH----LHAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYE 188
               N  I   + H    L     F ++     +A +++PN A  Y ++G + C   +YE
Sbjct: 284 NSYYNKGINIRLYHIGLLLQDLKMFDESIIQFKKAIEINPNNAMYYNKKGDVLCQIHKYE 343

Query: 189 EALRNLDKTIALNPN-----FHVARAQRHFVVHKMIVPGDRERVEQSLKEFRNFVDTHSN 243
           E++   +  I LNP      FH  +A                +  +S+ EF   ++   N
Sbjct: 344 ESIIEYNMAIQLNPKSPTYYFHKGKALL--------------KCNKSIIEFEKGIEL--N 387

Query: 244 VVEACTLFAQVLVDQEDFDGAEEY-----------FNRSIRVDPENASLYVHRAMLMLQA 292
           + EA  L  + L  Q ++ G   Y           ++++I ++P NA  Y  +   +  +
Sbjct: 388 LNEANYLNKKGLNIQTNYLGFPLYNLNNNEESIIKYDKAIELNPNNAKYYYSKGNALYNS 447

Query: 293 RGNVDEAIKLIEKAISIDKSCMFAYETLGTIEVQRGRLEEAVKCFNKALPLARDEAELSH 352
           +   +E+I   +KAI ++ +    Y + G    +  + EE++  F+KA+ L  +      
Sbjct: 448 KK-YEESIIEYDKAIELNPNDAEYYNSKGYALYELYKYEESIIEFDKAIELNPN---YDD 503

Query: 353 IYSLRDAAIAQMKVCE----RYNIKKKVSPRS---------QNITKNEKLAIK-----QL 394
            Y+ +  A+   K  E     Y+   +++P            N+ K E+  I+     +L
Sbjct: 504 YYNSKGNALCNQKKYEESIIEYDKAIELNPNYDDYYNRNVLWNLKKYEESIIEYDKAIEL 563

Query: 395 RENND-------IIIRPADKGGKTVV-MDKA-----DYTQ----KMTSILNSNDYEIIPG 437
             N D       + ++   K  ++++  DKA     +Y+Q    K  ++ N   YE    
Sbjct: 564 NTNYDDYYNSKGLALQELYKYEESIIEFDKAIELNHNYSQYYCNKGQALYNLKKYEESIK 623

Query: 438 DPTKTIEESEKYGNLENESGQK-HAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLF 496
           +  K IE    Y    N  GQ  +    + ++  + D+A K++PN  D YY    +Y L 
Sbjct: 624 EYDKAIELKPSYDVYYNRKGQALYYLKKYEESIIEFDKAIKLNPNY-DDYYNSKALYNL- 681

Query: 497 GQYEEALRNLDKTIALNPNF 516
            +YEE++   DK I LNPN+
Sbjct: 682 KKYEESIIEFDKAIKLNPNY 701


>gi|282164146|ref|YP_003356531.1| hypothetical protein MCP_1476 [Methanocella paludicola SANAE]
 gi|282156460|dbj|BAI61548.1| conserved hypothetical protein [Methanocella paludicola SANAE]
          Length = 348

 Score = 74.7 bits (182), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 81/376 (21%), Positives = 169/376 (44%), Gaps = 52/376 (13%)

Query: 151 SDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQ 210
           S+  ++   L +  + DPN  ++    G  Y   GQY+EA++ L+  + + P       +
Sbjct: 5   SNVEESIGKLQKMVEADPNNQEARMMLGLAYGTRGQYQEAIKELEAAVKMKPE----NPE 60

Query: 211 RHF---VVHKMIVPGDRERVEQSLKEFRNFVDTHSNVVEACTLFAQVLVDQEDFDGAEEY 267
            HF   + + M+     + ++ ++KE+   +    + ++A    A   +   + D A   
Sbjct: 61  AHFDLGLAYNMM-----DDLDNAVKEYNETLRLKPDHLDAMLNLANAYLAMGNADDALGL 115

Query: 268 FNRSIRVDPENASLYVHRAMLMLQARGNVDEAIKLIEKAISIDKSCMFAYETLGTIEVQR 327
           F   I  +PE+A ++    + +  A G +D+A ++++KAI+ D      +  L  + + +
Sbjct: 116 FKDMIAKNPESAEVFASFGVALASA-GYLDDAEEMLKKAIAKDPRSFDGHLFLAGVYMDK 174

Query: 328 GRLEEAVKCFNKALPLARDEAEL--SHIYSLRDAAIAQMKVCERYNIKKKVSPRSQNITK 385
           G +++A+K +  A  ++ +E  +  +  ++L +  +  M   E+Y I   + P       
Sbjct: 175 GEVDDAIKEYRIAATISPEEPSVFYNWGFALSEKGLT-MDAIEKYQIAVHLDPGFVEARY 233

Query: 386 NEKLAIKQLRENNDIIIRPADKGGKTVVMDKADYTQKMTSILNSNDYEIIPGDPTKTIEE 445
           N  LA    ++N                +D+A    K          E I  DP+     
Sbjct: 234 N--LASMLAKQNR---------------LDEAITELK----------ETIKADPS----- 261

Query: 446 SEKYGNLENESGQKHAASDFTKA-FADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALR 504
              + +  N  G  + A +FT+A   +L+EA K+DP+ A +Y   G +Y    QY+EA++
Sbjct: 262 ---FADAHNMLGVIYTAKEFTRAAINELEEAVKLDPDFAVAYNNLGMVYYGQEQYDEAIK 318

Query: 505 NLDKTIALNPNFHVAR 520
             ++ + ++P +  A+
Sbjct: 319 VFEQALKIDPGYFEAQ 334



 Score = 47.0 bits (110), Expect = 0.029,   Method: Compositional matrix adjust.
 Identities = 29/91 (31%), Positives = 52/91 (57%), Gaps = 4/91 (4%)

Query: 119 EDLTQLVEDTSVDPKIKVNAHIKRAVVHLHAASDFTKA-FADLDEAEKVDPNVADSYYQR 177
           E +T+L E    DP    +AH    V++   A +FT+A   +L+EA K+DP+ A +Y   
Sbjct: 247 EAITELKETIKADPSF-ADAHNMLGVIY--TAKEFTRAAINELEEAVKLDPDFAVAYNNL 303

Query: 178 GQIYCLFGQYEEALRNLDKTIALNPNFHVAR 208
           G +Y    QY+EA++  ++ + ++P +  A+
Sbjct: 304 GMVYYGQEQYDEAIKVFEQALKIDPGYFEAQ 334


>gi|186681165|ref|YP_001864361.1| hypothetical protein Npun_R0666 [Nostoc punctiforme PCC 73102]
 gi|186463617|gb|ACC79418.1| TPR repeat-containing protein [Nostoc punctiforme PCC 73102]
          Length = 532

 Score = 74.7 bits (182), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 55/213 (25%), Positives = 100/213 (46%), Gaps = 9/213 (4%)

Query: 129 SVDPKIKVNAHIKRAVVHLHAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYE 188
           S+DP   V AH    VV LH     ++A A   +A ++DPN  +++   G+     G+  
Sbjct: 194 SLDPN-SVYAHNALGVV-LHTQGKLSEAIAAYQKALQIDPNYVNAHCNLGKALHTQGKLS 251

Query: 189 EALRNLDKTIALNPNFHVARAQRHFVVHKMIVPGDRERVEQSLKEFRNFVDTHSNVVEAC 248
           EA+    + + L+PN           +H      D+ ++ +++  ++  +    N V A 
Sbjct: 252 EAMAAYQRALRLDPNDADTHCNLGIALH------DQGKLSEAIAAYQKALQIDPNYVNAH 305

Query: 249 TLFAQVLVDQEDFDGAEEYFNRSIRVDPENASLYVHRAMLMLQARGNVDEAIKLIEKAIS 308
               + L  Q     A   + R++RVDP  AS + +  + +   +G + EAI   +KA+ 
Sbjct: 306 CNLGKALHTQGKLSEAMAAYQRALRVDPNYASAHCNLGVTLYH-QGKLSEAIAAYQKALQ 364

Query: 309 IDKSCMFAYETLGTIEVQRGRLEEAVKCFNKAL 341
           ID + + A+  LG     +G+L EA+  + +AL
Sbjct: 365 IDPNYVNAHCNLGKALHTQGKLSEAMAAYQRAL 397



 Score = 68.2 bits (165), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 55/252 (21%), Positives = 118/252 (46%), Gaps = 16/252 (6%)

Query: 145 VHLHAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNF 204
           + LH     ++A A   +A ++DPN  +++   G+     G+  EA+    + + ++PN+
Sbjct: 276 IALHDQGKLSEAIAAYQKALQIDPNYVNAHCNLGKALHTQGKLSEAMAAYQRALRVDPNY 335

Query: 205 HVARAQRHFVVHKMIVPGDRERVEQSLKEFRNFVDTHSNVVEACTLFAQVLVDQEDFDGA 264
             A       ++       + ++ +++  ++  +    N V A     + L  Q     A
Sbjct: 336 ASAHCNLGVTLYH------QGKLSEAIAAYQKALQIDPNYVNAHCNLGKALHTQGKLSEA 389

Query: 265 EEYFNRSIRVDPENASLYVHRAMLMLQARGNVDEAIKLIEKAISIDKSCMFAYETLGTIE 324
              + R++RVDP  AS + +  + +   +G + EAI   ++A+ +D +    +  LG   
Sbjct: 390 MAAYQRALRVDPNYASAHCNLGVTLYH-QGKLSEAIAAYQRALRLDPNDADTHCNLGIAL 448

Query: 325 VQRGRLEEAVKCFNKALPLARDEAELSHI---YSLR-----DAAIAQMKVCERYNIKKKV 376
             +G+L EA+  + +AL +  ++A+ +H     +L+     + AIA++++  R N    V
Sbjct: 449 HDQGKLSEAIAAYQRALLIDPNDAD-AHCNLGIALKGQGKLEEAIAELEIAVRLNPNNTV 507

Query: 377 SPRSQNITKNEK 388
              +  I +NEK
Sbjct: 508 IRNNLEIYRNEK 519



 Score = 45.1 bits (105), Expect = 0.11,   Method: Compositional matrix adjust.
 Identities = 26/83 (31%), Positives = 49/83 (59%), Gaps = 3/83 (3%)

Query: 268 FNRSIRVDPENASLYVHRAM-LMLQARGNVDEAIKLIEKAISIDKSCMFAYETLGTIEVQ 326
           +  ++ +DP   S+Y H A+ ++L  +G + EAI   +KA+ ID + + A+  LG     
Sbjct: 189 YKAALSLDPN--SVYAHNALGVVLHTQGKLSEAIAAYQKALQIDPNYVNAHCNLGKALHT 246

Query: 327 RGRLEEAVKCFNKALPLARDEAE 349
           +G+L EA+  + +AL L  ++A+
Sbjct: 247 QGKLSEAMAAYQRALRLDPNDAD 269


>gi|296126399|ref|YP_003633651.1| hypothetical protein [Brachyspira murdochii DSM 12563]
 gi|296018215|gb|ADG71452.1| TPR repeat-containing protein [Brachyspira murdochii DSM 12563]
          Length = 376

 Score = 74.7 bits (182), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 55/209 (26%), Positives = 100/209 (47%), Gaps = 13/209 (6%)

Query: 145 VHLHAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPN- 203
           V+ +    F  A   L++A ++DPN A +Y  RG    + G+ EEA+++ DK I L+PN 
Sbjct: 178 VNYYNKKQFEDALKTLNKAIELDPNKAKAYLYRGVSQLVMGRNEEAIKDFDKAIELDPNY 237

Query: 204 --FHVARAQRHFVVHKMIVPGDRERVEQSLKEFRNFVDTHSNVVEACTLFAQVLVDQEDF 261
             F++ R     ++ K          E+++K+F   ++  SN  +A        +    +
Sbjct: 238 PKFYLYRGHSKNLLKK---------YEEAVKDFDKAIELDSNYAKAYMYRGVSKLGLNKY 288

Query: 262 DGAEEYFNRSIRVDPENASLYVHRAMLMLQARGNVDEAIKLIEKAISIDKSCMFAYETLG 321
           + A + F+++I ++P     Y HR +  L    N DE I+  +K   ++    F Y   G
Sbjct: 289 EEAIKDFDKTIELNPNYIDAYYHRGLSKLGLNQN-DEGIEDFDKIAELNPDNSFVYFVRG 347

Query: 322 TIEVQRGRLEEAVKCFNKALPLARDEAEL 350
            I+    + EEA+K F K   L +  +++
Sbjct: 348 NIKKSLNKDEEALKDFQKYEELEKQNSQI 376



 Score = 53.9 bits (128), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 37/117 (31%), Positives = 57/117 (48%), Gaps = 7/117 (5%)

Query: 96  TKALARLLRATVYIFTSQSTKAIEDLTQLVEDTSVDPKIKV-NAHIKRAVVHLHAASDFT 154
            KA A L R    +   ++ +AI+D  + +E     PK  +   H K  +        + 
Sbjct: 202 NKAKAYLYRGVSQLVMGRNEEAIKDFDKAIELDPNYPKFYLYRGHSKNLL------KKYE 255

Query: 155 KAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQR 211
           +A  D D+A ++D N A +Y  RG       +YEEA+++ DKTI LNPN+  A   R
Sbjct: 256 EAVKDFDKAIELDSNYAKAYMYRGVSKLGLNKYEEAIKDFDKTIELNPNYIDAYYHR 312



 Score = 47.4 bits (111), Expect = 0.019,   Method: Compositional matrix adjust.
 Identities = 25/65 (38%), Positives = 37/65 (56%)

Query: 459 KHAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHV 518
           K+    + +A  D D+A ++D N A +Y  RG       +YEEA+++ DKTI LNPN+  
Sbjct: 248 KNLLKKYEEAVKDFDKAIELDSNYAKAYMYRGVSKLGLNKYEEAIKDFDKTIELNPNYID 307

Query: 519 ARAQR 523
           A   R
Sbjct: 308 AYYHR 312



 Score = 43.9 bits (102), Expect = 0.23,   Method: Compositional matrix adjust.
 Identities = 78/337 (23%), Positives = 123/337 (36%), Gaps = 90/337 (26%)

Query: 174 YYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQRHFVVHKMIVPGDRERVEQSL-K 232
           Y  RG +      Y+EA+ +  K + LNPN+  A+        K +   DR+  E +L K
Sbjct: 117 YKHRGDVETDLNLYDEAIEDYKKALELNPNYIEAK--------KALEEADRKLKEYNLNK 168

Query: 233 EFRNFVDTHSNVVEACTLFAQVLVDQEDFDGAEEYFNRSIRVDPENASLYVHRAMLMLQA 292
            F N+       +E                    Y+N+                      
Sbjct: 169 SFDNYY------IEGVN-----------------YYNKK--------------------- 184

Query: 293 RGNVDEAIKLIEKAISIDKSCMFAYETLGTIEVQRGRLEEAVKCFNKALPLARDEAELSH 352
               ++A+K + KAI +D +   AY   G  ++  GR EEA+K F+KA+ L   +     
Sbjct: 185 --QFEDALKTLNKAIELDPNKAKAYLYRGVSQLVMGRNEEAIKDFDKAIEL---DPNYPK 239

Query: 353 IYSLRDAAIAQMKVCERYNIKKKVSPRSQNITKNEKLAIKQLRENNDIIIRPADKGGKTV 412
            Y  R                      S+N+ K  + A+K      D  I       K  
Sbjct: 240 FYLYR--------------------GHSKNLLKKYEEAVKDF----DKAIELDSNYAKA- 274

Query: 413 VMDKADYTQKMTSILNSNDYEIIPGDPTKTIEESEKYGNLENESG-QKHAASDFTKAFAD 471
                 Y  +  S L  N YE    D  KTIE +  Y +     G  K   +   +   D
Sbjct: 275 ------YMYRGVSKLGLNKYEEAIKDFDKTIELNPNYIDAYYHRGLSKLGLNQNDEGIED 328

Query: 472 LDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDK 508
            D+  +++P+ +  Y+ RG I     + EEAL++  K
Sbjct: 329 FDKIAELNPDNSFVYFVRGNIKKSLNKDEEALKDFQK 365



 Score = 42.7 bits (99), Expect = 0.55,   Method: Compositional matrix adjust.
 Identities = 22/56 (39%), Positives = 31/56 (55%)

Query: 468 AFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQR 523
           A  D D+A ++DPN    Y  RG    L  +YEEA+++ DK I L+ N+  A   R
Sbjct: 223 AIKDFDKAIELDPNYPKFYLYRGHSKNLLKKYEEAVKDFDKAIELDSNYAKAYMYR 278



 Score = 38.5 bits (88), Expect = 8.9,   Method: Compositional matrix adjust.
 Identities = 26/85 (30%), Positives = 38/85 (44%), Gaps = 1/85 (1%)

Query: 432 YEIIPGDPTKTIEESEKYGNLENESG-QKHAASDFTKAFADLDEAEKVDPNVADSYYQRG 490
           YE    D  K IE    Y       G  K   + + +A  D D+  +++PN  D+YY RG
Sbjct: 254 YEEAVKDFDKAIELDSNYAKAYMYRGVSKLGLNKYEEAIKDFDKTIELNPNYIDAYYHRG 313

Query: 491 QIYCLFGQYEEALRNLDKTIALNPN 515
                  Q +E + + DK   LNP+
Sbjct: 314 LSKLGLNQNDEGIEDFDKIAELNPD 338


>gi|359457127|ref|ZP_09245690.1| TPR domain-containing protein [Acaryochloris sp. CCMEE 5410]
          Length = 606

 Score = 74.7 bits (182), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 70/263 (26%), Positives = 122/263 (46%), Gaps = 15/263 (5%)

Query: 103 LRATVYIFTSQSTKAIEDLTQLVEDTSVDPKIKVNAHIKRAVVHLHAASDFTKAFADLDE 162
           L+AT  +    S  A+ DL Q +   S++P    +A+  RA +      D   A ADLD+
Sbjct: 282 LQATDKLQRGDSQGALRDLNQAI---SLNPNY-ASAYGDRATIKFQQG-DRKGALADLDQ 336

Query: 163 AEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQRHFV-VHKMIVP 221
           A ++DP +AD+Y  RG    + G    A  +++K + L P   +  A R  V  ++  + 
Sbjct: 337 AIQIDPQLADAYGIRGLYRVVTGNIRGAQSDVEKAVRLKP--EIGYASRGVVRWYRSDLA 394

Query: 222 GDRERVEQSLKEFRNFVDTHSNVVEACTLFAQVLVDQ-EDFDGAEEYFNRSIRVDPENAS 280
           G +   +Q+L    +F D +     A   F   +  Q  +FDGA +  NRSI+++P+   
Sbjct: 395 GAQSDFDQALSLKDSFKDAY-----AVHYFRGFVRWQLGNFDGALQDLNRSIQLNPKYLE 449

Query: 281 LYVHRAMLMLQARGNVDEAIKLIEKAISIDKSCMFAYETLGTIEVQRGRLEEAVKCFNKA 340
               R +L  Q  G+   A++  ++ I I+      Y   G I + +G  + A+  F++ 
Sbjct: 450 AVGIRGILRFQM-GDEVGALRDFDEGIRINTGSSDIYTIRGMIRLTQGDSQGAISDFDQV 508

Query: 341 LPLARDEAELSHIYSLRDAAIAQ 363
           + +      L+ +Y  R  A  Q
Sbjct: 509 IRIQPGNVALADMYGSRGIAYFQ 531



 Score = 40.4 bits (93), Expect = 2.1,   Method: Compositional matrix adjust.
 Identities = 24/70 (34%), Positives = 35/70 (50%), Gaps = 3/70 (4%)

Query: 459 KHAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHV 518
           K    D   A ADLD+A ++DP +AD+Y  RG    + G    A  +++K + L P   +
Sbjct: 321 KFQQGDRKGALADLDQAIQIDPQLADAYGIRGLYRVVTGNIRGAQSDVEKAVRLKP--EI 378

Query: 519 ARAQRHFV-W 527
             A R  V W
Sbjct: 379 GYASRGVVRW 388


>gi|113475197|ref|YP_721258.1| hypothetical protein Tery_1499 [Trichodesmium erythraeum IMS101]
 gi|110166245|gb|ABG50785.1| TPR repeat [Trichodesmium erythraeum IMS101]
          Length = 486

 Score = 74.7 bits (182), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 79/372 (21%), Positives = 165/372 (44%), Gaps = 29/372 (7%)

Query: 153 FTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQRH 212
           F +A      A ++DPN   +Y   G++     QY+EA+ + ++ I +NP      ++ H
Sbjct: 127 FDEAIVTYRRAIEIDPNAILTYQYLGEVLACKKQYDEAIESFNQAIGINPYL----SEYH 182

Query: 213 FVVHKMIVPGDRERVEQSLKEFRNFVDTHSNVVEACTLFAQVLVDQEDFDGAEEYFNRSI 272
             + K++   +  ++E+++    + ++ + N+ EA           + ++ A +   ++I
Sbjct: 183 LGLAKVL--QNAGQIEKAINSCHHALELNPNLAEAYYYIGLGFTKLQKWEEAIDSLLQAI 240

Query: 273 RVDPENASLYVHRAMLMLQARGNVDEAIKLIEKAISIDKSCMFAYETLGTIEVQRGRLEE 332
            ++ +NA +Y H    + Q +   +EA+   +  +  + +    +  L     Q  + EE
Sbjct: 241 SLNFKNAEVYHHLGAALAQLQ-RWEEAVAAYKNGLEFNPNSAIIHHQLAYALAQIKQWEE 299

Query: 333 AVKCFNKALPLARDEAELSHIYSLRDAAIAQMKVCER----YNIKKKVSPRSQNITKNEK 388
           AVK + + L +  + A    +Y     A+ +++  E     Y    K+ P +Q   ++ +
Sbjct: 300 AVKEYREVLIINPNSAV---VYDQLGEALTEIQKWEEAIDCYQKAVKIKPDNQKFNQHLQ 356

Query: 389 LAIKQLRENNDIIIRPADKGGKTVVMDKADYTQKMTSILNSNDYEIIPGDPTKTIEESEK 448
            A+ + +E N   I    K  +  +M+K  +  +  S        ++  +PT        
Sbjct: 357 EALTRRQEKNKTTIESHLKLAE--MMEKQGFANEAISAYR----RVVSLNPTA------- 403

Query: 449 YGNLENESGQKHAASD-FTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLD 507
             +L ++ G   A S+ + +A A   +A K++PN    YY  G      G  EEA+ +L+
Sbjct: 404 -ADLHHKLGYALATSERWDEAVAPYRQAIKLNPNSGVVYYHLGIALSYLGLDEEAISSLE 462

Query: 508 KTIALNPNFHVA 519
           K I L P+   A
Sbjct: 463 KAIQLKPDLSSA 474



 Score = 56.6 bits (135), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 42/163 (25%), Positives = 79/163 (48%), Gaps = 15/163 (9%)

Query: 185 GQYEEALRNLDKTIALNPNFHVARAQRHFVVHKMIVPGDRERVEQSLKEFRNF----VDT 240
           G + EA     + I LNP        +  V H+ +  G+   ++ +L+E  N     +  
Sbjct: 23  GNFPEAADAYRQVIKLNP--------KSAVGHQNL--GEALSLQGNLEEAANIYYQGIQL 72

Query: 241 HSNVVEACTLFAQVLVDQEDFDGAEEYFNRSIRVDPENASLYVHRAMLMLQARGNVDEAI 300
             N   +     ++L+  E FD A  Y  ++I ++P+ ++ + H   L L  +G  DEAI
Sbjct: 73  QKNYPWSYYNLGEILIKLERFDEAVIYLRQAIELNPDFSNFH-HSLGLALSKKGLFDEAI 131

Query: 301 KLIEKAISIDKSCMFAYETLGTIEVQRGRLEEAVKCFNKALPL 343
               +AI ID + +  Y+ LG +   + + +EA++ FN+A+ +
Sbjct: 132 VTYRRAIEIDPNAILTYQYLGEVLACKKQYDEAIESFNQAIGI 174



 Score = 47.8 bits (112), Expect = 0.013,   Method: Compositional matrix adjust.
 Identities = 65/285 (22%), Positives = 125/285 (43%), Gaps = 38/285 (13%)

Query: 255 LVDQEDFDGAEEYFNRSIRVDPENASLYVHRAMLMLQARGNVDEAIKLIEKAISIDKSCM 314
           L+ Q +F  A + + + I+++P++A  + +     L  +GN++EA  +  + I + K+  
Sbjct: 19  LLRQGNFPEAADAYRQVIKLNPKSAVGHQNLGE-ALSLQGNLEEAANIYYQGIQLQKNYP 77

Query: 315 FAYETLGTIEVQRGRLEEAVKCFNKALPLARDEAELSHIYSLRDAAIAQMKVCERYNIKK 374
           ++Y  LG I ++  R +EAV    +A+ L  D +   H   L   A+++  + +   +  
Sbjct: 78  WSYYNLGEILIKLERFDEAVIYLRQAIELNPDFSNFHHSLGL---ALSKKGLFDEAIVTY 134

Query: 375 KVSPRSQNITKNEKLAIKQLRENNDIIIRPADKGGKTVVMDKADYTQKMTSILNSNDYEI 434
           +   R+  I  N  L  + L E               V+  K  Y + + S       + 
Sbjct: 135 R---RAIEIDPNAILTYQYLGE---------------VLACKKQYDEAIESF-----NQA 171

Query: 435 IPGDPTKTIEESEKYGNLENESGQKHAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYC 494
           I  +P  +         L+N       A    KA      A +++PN+A++YY  G  + 
Sbjct: 172 IGINPYLSEYHLGLAKVLQN-------AGQIEKAINSCHHALELNPNLAEAYYYIGLGFT 224

Query: 495 LFGQYEEALRNLDKTIALNPNFHVARAQRHFVWTSTLAELMAFSD 539
              ++EEA+ +L + I+L  NF  A    H    + LA+L  + +
Sbjct: 225 KLQKWEEAIDSLLQAISL--NFKNAEVYHHL--GAALAQLQRWEE 265



 Score = 41.2 bits (95), Expect = 1.3,   Method: Compositional matrix adjust.
 Identities = 40/191 (20%), Positives = 81/191 (42%), Gaps = 20/191 (10%)

Query: 153 FTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNP-----NFHVA 207
           + +A  +  E   ++PN A  Y Q G+      ++EEA+    K + + P     N H+ 
Sbjct: 297 WEEAVKEYREVLIINPNSAVVYDQLGEALTEIQKWEEAIDCYQKAVKIKPDNQKFNQHLQ 356

Query: 208 RA------------QRHFVVHKMIVPGDRERVEQSLKEFRNFVDTHSNVVEACTLFAQVL 255
            A            + H  + +M+    +    +++  +R  V  +    +        L
Sbjct: 357 EALTRRQEKNKTTIESHLKLAEMM--EKQGFANEAISAYRRVVSLNPTAADLHHKLGYAL 414

Query: 256 VDQEDFDGAEEYFNRSIRVDPENASLYVHRAMLMLQARGNVDEAIKLIEKAISIDKSCMF 315
              E +D A   + ++I+++P +  +Y H  +  L   G  +EAI  +EKAI +      
Sbjct: 415 ATSERWDEAVAPYRQAIKLNPNSGVVYYHLGI-ALSYLGLDEEAISSLEKAIQLKPDLSS 473

Query: 316 AYETLGTIEVQ 326
           A++ L  ++V+
Sbjct: 474 AHQALEKLQVK 484


>gi|220906220|ref|YP_002481531.1| hypothetical protein Cyan7425_0783 [Cyanothece sp. PCC 7425]
 gi|219862831|gb|ACL43170.1| Tetratricopeptide TPR_2 repeat protein [Cyanothece sp. PCC 7425]
          Length = 542

 Score = 74.7 bits (182), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 83/341 (24%), Positives = 144/341 (42%), Gaps = 38/341 (11%)

Query: 28  KTYLKSFPNDPILQPDGLSNGVELTNGDTNESHELDLLSKAKRAFEHEDYLTAIRHCTEE 87
           +T LK FP  P+  P        L+N  T ++  L  ++K    +  +DY  AI      
Sbjct: 233 RTALKGFPV-PVAAP--------LSNQPTTDNFFLQAIAK----YRQQDYRGAIADFDRA 279

Query: 88  IESTSSNHTKALARLLRATVYIFTSQSTKAIEDLTQLVEDTSVDPKIKVNAHIKRAVVHL 147
           I     N    LA   R            A+ D  + +    ++P++ + A+  R +   
Sbjct: 280 IRL---NPQLDLAYSNRGLARYGLQDYRGAVADFDRAIR---LNPQLDL-AYYNRGLAR- 331

Query: 148 HAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVA 207
           +   D+  A AD D+A +++P  AD+Y  RG +      Y  A+ + D+ I LNP F +A
Sbjct: 332 YGLQDYRGARADFDQAIRLNPKDADAYNNRGSVRRELQDYRGAVADFDRAIRLNPKFDLA 391

Query: 208 RAQRHFVVHKMIVPGDRERVEQSLKEFRNFVDTHSNVVEACTLFAQVLVDQEDFDGAEEY 267
              R     K+      +    +L +F   +  +    +A      V    +D+ GA   
Sbjct: 392 YYNRGITRRKL------QDYGGALADFDQAIRLNPRDADAYNNRGFVRYGLQDYGGALAD 445

Query: 268 FNRSIRVDPENASLYVHRAML---MLQARGNVDEAIKLIEKAISIDKSCMFAYETLGTIE 324
           F+++IR++PE+A +Y +R  +   +   RG    AI   ++AI +      AY   G   
Sbjct: 446 FDQAIRLNPEDADIYNNRGFVRYGLQDYRG----AIADFDQAIRLQPDLALAYYHRGLAR 501

Query: 325 VQRGRLEEAVKCFNKALPLARDEAELSHIYSLRDAAIAQMK 365
            Q      A+  + +A  LA+ +     +Y L   AI Q++
Sbjct: 502 AQAEERRAALPDYQRAAELAQAQGN-DQVYQL---AIMQLR 538



 Score = 46.2 bits (108), Expect = 0.041,   Method: Compositional matrix adjust.
 Identities = 65/278 (23%), Positives = 114/278 (41%), Gaps = 54/278 (19%)

Query: 258 QEDFDGAEEYFNRSIRVDPENASLYVHRAMLMLQARGNVDE---AIKLIEKAISIDKSCM 314
           Q+D+ GA   F+R+IR++P+    Y +R +    AR  + +   A+   ++AI ++    
Sbjct: 266 QQDYRGAIADFDRAIRLNPQLDLAYSNRGL----ARYGLQDYRGAVADFDRAIRLNPQLD 321

Query: 315 FAYETLGTIEVQRGRLEEAVKCFNKALPL-ARDEAELSHIYSLRD------AAIAQMKVC 367
            AY   G           A   F++A+ L  +D    ++  S+R        A+A     
Sbjct: 322 LAYYNRGLARYGLQDYRGARADFDQAIRLNPKDADAYNNRGSVRRELQDYRGAVADFDRA 381

Query: 368 ERYNIKKKVSPRSQNITKNEKLAIKQLRENNDIIIRPADKGGKTVVMDKADYTQKMTSIL 427
            R N K  ++  ++ IT+      ++L+          D GG       AD+ Q +   L
Sbjct: 382 IRLNPKFDLAYYNRGITR------RKLQ----------DYGGAL-----ADFDQAIR--L 418

Query: 428 NSNDYEIIPGDPTKTIEESEKYGNLENESGQKHAASDFTKAFADLDEAEKVDPNVADSYY 487
           N  D              ++ Y    N    ++   D+  A AD D+A +++P  AD Y 
Sbjct: 419 NPRD--------------ADAY---NNRGFVRYGLQDYGGALADFDQAIRLNPEDADIYN 461

Query: 488 QRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQRHF 525
            RG +      Y  A+ + D+ I L P+  +A   R  
Sbjct: 462 NRGFVRYGLQDYRGAIADFDQAIRLQPDLALAYYHRGL 499



 Score = 38.9 bits (89), Expect = 7.4,   Method: Compositional matrix adjust.
 Identities = 30/97 (30%), Positives = 41/97 (42%), Gaps = 1/97 (1%)

Query: 431 DYEIIPGDPTKTIEESEKYGNLENESGQ-KHAASDFTKAFADLDEAEKVDPNVADSYYQR 489
           DY     D  + I  + K  +  N  G  +    D+  A AD D A +++P    +YY R
Sbjct: 336 DYRGARADFDQAIRLNPKDADAYNNRGSVRRELQDYRGAVADFDRAIRLNPKFDLAYYNR 395

Query: 490 GQIYCLFGQYEEALRNLDKTIALNPNFHVARAQRHFV 526
           G        Y  AL + D+ I LNP    A   R FV
Sbjct: 396 GITRRKLQDYGGALADFDQAIRLNPRDADAYNNRGFV 432


>gi|219122591|ref|XP_002181625.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
 gi|217406901|gb|EEC46839.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
          Length = 640

 Score = 74.7 bits (182), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 59/217 (27%), Positives = 107/217 (49%), Gaps = 16/217 (7%)

Query: 161 DEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQRHFVVHKMIV 220
           D A  +DP  AD+   R  +  L  + +EA  +L+  IA+ P+  +AR +   +   +  
Sbjct: 419 DTALGLDPKNADALLHRANLRLLQTKPDEAKEDLEACIAVRPDHIMARLRLASI---LAA 475

Query: 221 PGDRERVEQSLKEFRNFVDTHSNVVEACTLFAQVLVDQEDFDGAEEYFNRSIRVDPENAS 280
             +  + ++ L      V+  S+ V+  +   ++   Q +FD A   F ++I +DP N +
Sbjct: 476 TNEAAKAKKHLDAAEK-VEPKSSEVQ--SYRGELHFTQGEFDQARAQFEKAIALDPTNPT 532

Query: 281 LYVHRAMLMLQA------RGNVDEAIKLIEKAISIDKSCMFAYETLGTIEV----QRGRL 330
            YV+ AM +LQ         +  E I+L+E+AI +D S   AY  LG +++    +    
Sbjct: 533 PYVNAAMAILQTPPPPGQMPDAQEVIRLLEEAIRVDPSFTLAYTHLGNVKLGTATELSSA 592

Query: 331 EEAVKCFNKALPLARDEAELSHIYSLRDAAIAQMKVC 367
            E V  +++AL   R E E+  + S+R  A+AQ++  
Sbjct: 593 REVVTLYDQALANCRSEEEIKELCSMRILAVAQVEAA 629



 Score = 38.5 bits (88), Expect = 9.8,   Method: Compositional matrix adjust.
 Identities = 19/55 (34%), Positives = 33/55 (60%)

Query: 461 AASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPN 515
           A ++  KA   LD AEKV+P  ++    RG+++   G++++A    +K IAL+P 
Sbjct: 475 ATNEAAKAKKHLDAAEKVEPKSSEVQSYRGELHFTQGEFDQARAQFEKAIALDPT 529


>gi|414078950|ref|YP_006998268.1| TPR repeat-containing serine protease [Anabaena sp. 90]
 gi|413972366|gb|AFW96455.1| TPR repeat-containing serine protease [Anabaena sp. 90]
          Length = 613

 Score = 74.3 bits (181), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 54/229 (23%), Positives = 113/229 (49%), Gaps = 8/229 (3%)

Query: 151 SDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQ 210
            D   A AD ++A   +PN A +YY RG +    G  + A+++ ++ + +NPN  +A   
Sbjct: 303 GDKQGAIADFNQALNFNPNDALAYYNRGGVRSELGDKQAAIQDYNQALKINPNDALAYYN 362

Query: 211 RHFVVHKMIVPGDRERVEQSLKEFRNFVDTHSNVVEACTLFAQVLVDQEDFDGAEEYFNR 270
           R  V  ++   GD++    +++++   +  + N  EA         D  D  GA + +N+
Sbjct: 363 RGGVRSEL---GDKQG---AIQDYNQALKINPNYAEAYINRGLARSDSGDKQGAIQDYNQ 416

Query: 271 SIRVDPENASLYVHRAMLMLQARGNVDEAIKLIEKAISIDKSCMFAYETLGTIEVQRGRL 330
           +++++P  A  Y++R +    + G+   AI    +AI I+ +  +AY   G      G  
Sbjct: 417 ALKINPNYAYAYINRGLARYDS-GDKQGAIADFNQAIKINPNDDYAYYNRGLARSNLGDK 475

Query: 331 EEAVKCFNKALPLARDEAE-LSHIYSLRDAAIAQMKVCERYNIKKKVSP 378
           + A++ +N+A+ +  ++A+  ++  + R A   +    + YN   K++P
Sbjct: 476 QAAIQDYNQAIKINPNDAQAYNNRGATRSALGDKQAAIQDYNQAIKINP 524



 Score = 68.9 bits (167), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 78/366 (21%), Positives = 149/366 (40%), Gaps = 48/366 (13%)

Query: 151 SDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQ 210
            D   A    +EA +++P+ A++Y  RG I    G  + A+ + ++ +  NPN  +A   
Sbjct: 269 GDNQGAIIAYNEAIRLNPSFAEAYSNRGGIRSNLGDKQGAIADFNQALNFNPNDALAYYN 328

Query: 211 RHFVVHKMIVPGDRERVEQSLKEFRNFVDTHSNVVEACTLFAQVLVDQEDFDGAEEYFNR 270
           R  V  ++   GD++    +++++   +  + N   A      V  +  D  GA + +N+
Sbjct: 329 RGGVRSEL---GDKQ---AAIQDYNQALKINPNDALAYYNRGGVRSELGDKQGAIQDYNQ 382

Query: 271 SIRVDPENASLYVHRAMLMLQARGNVDEAIKLIEKAISIDKSCMFAYETLGTIEVQRGRL 330
           +++++P  A  Y++R  L     G+   AI+   +A+ I+ +  +AY   G      G  
Sbjct: 383 ALKINPNYAEAYINRG-LARSDSGDKQGAIQDYNQALKINPNYAYAYINRGLARYDSGDK 441

Query: 331 EEAVKCFNKALPLARDEAELSHIYSLRDAAIAQMK----VCERYNIKKKVSPRSQNITKN 386
           + A+  FN+A+ +  ++    + Y  R  A + +       + YN   K++P       N
Sbjct: 442 QGAIADFNQAIKINPND---DYAYYNRGLARSNLGDKQAAIQDYNQAIKINPNDAQAYNN 498

Query: 387 EKLAIKQLRENNDIIIRPADKGGKTVVMDKADYTQKMTSILNSNDYEIIPGDPTKTIEES 446
                  L             G K   +   DY Q +   +N N Y +            
Sbjct: 499 RGATRSAL-------------GDKQAAIQ--DYNQAIK--INPN-YALA----------- 529

Query: 447 EKYGNLENESGQKHAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNL 506
                  N    + A  D   A  D ++A  ++P +A+ YY RG      G  + A+ +L
Sbjct: 530 -----YNNRGNARSALGDKQGAITDFNQAININPKLAEPYYNRGNARLALGDKQGAISDL 584

Query: 507 DKTIAL 512
            +   L
Sbjct: 585 QQAANL 590



 Score = 55.8 bits (133), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 59/258 (22%), Positives = 107/258 (41%), Gaps = 12/258 (4%)

Query: 94  NHTKALARLLRATVYIFTSQSTKAIEDLTQLVEDTSVDPKIKVNAHIKRAVVHLHAASDF 153
           N   ALA   R  V         AI+D  Q ++   ++P     A+I R +    +  D 
Sbjct: 353 NPNDALAYYNRGGVRSELGDKQGAIQDYNQALK---INPNY-AEAYINRGLARSDSG-DK 407

Query: 154 TKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQRHF 213
             A  D ++A K++PN A +Y  RG      G  + A+ + ++ I +NPN   A   R  
Sbjct: 408 QGAIQDYNQALKINPNYAYAYINRGLARYDSGDKQGAIADFNQAIKINPNDDYAYYNRGL 467

Query: 214 VVHKMIVPGDRERVEQSLKEFRNFVDTHSNVVEACTLFAQVLVDQEDFDGAEEYFNRSIR 273
               +   GD+   + +++++   +  + N  +A            D   A + +N++I+
Sbjct: 468 ARSNL---GDK---QAAIQDYNQAIKINPNDAQAYNNRGATRSALGDKQAAIQDYNQAIK 521

Query: 274 VDPENASLYVHRAMLMLQARGNVDEAIKLIEKAISIDKSCMFAYETLGTIEVQRGRLEEA 333
           ++P  A  Y +R      A G+   AI    +AI+I+      Y   G   +  G  + A
Sbjct: 522 INPNYALAYNNRGNAR-SALGDKQGAITDFNQAININPKLAEPYYNRGNARLALGDKQGA 580

Query: 334 VKCFNKALPLARDEAELS 351
           +    +A  L + +  L 
Sbjct: 581 ISDLQQAANLFQQQGNLG 598



 Score = 43.9 bits (102), Expect = 0.19,   Method: Compositional matrix adjust.
 Identities = 23/86 (26%), Positives = 42/86 (48%)

Query: 454 NESGQKHAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALN 513
           N  G +    D   A  D ++A K++PN A +YY RG +    G  + A+++ ++ + +N
Sbjct: 328 NRGGVRSELGDKQAAIQDYNQALKINPNDALAYYNRGGVRSELGDKQGAIQDYNQALKIN 387

Query: 514 PNFHVARAQRHFVWTSTLAELMAFSD 539
           PN+  A   R    + +  +  A  D
Sbjct: 388 PNYAEAYINRGLARSDSGDKQGAIQD 413



 Score = 42.0 bits (97), Expect = 0.91,   Method: Compositional matrix adjust.
 Identities = 22/76 (28%), Positives = 38/76 (50%)

Query: 453 ENESGQKHAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIAL 512
            N  G +    D   A AD ++A   +PN A +YY RG +    G  + A+++ ++ + +
Sbjct: 293 SNRGGIRSNLGDKQGAIADFNQALNFNPNDALAYYNRGGVRSELGDKQAAIQDYNQALKI 352

Query: 513 NPNFHVARAQRHFVWT 528
           NPN  +A   R  V +
Sbjct: 353 NPNDALAYYNRGGVRS 368



 Score = 40.0 bits (92), Expect = 3.3,   Method: Compositional matrix adjust.
 Identities = 22/86 (25%), Positives = 41/86 (47%)

Query: 454 NESGQKHAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALN 513
           N  G +    D   A  D ++A K++PN A++Y  RG      G  + A+++ ++ + +N
Sbjct: 362 NRGGVRSELGDKQGAIQDYNQALKINPNYAEAYINRGLARSDSGDKQGAIQDYNQALKIN 421

Query: 514 PNFHVARAQRHFVWTSTLAELMAFSD 539
           PN+  A   R      +  +  A +D
Sbjct: 422 PNYAYAYINRGLARYDSGDKQGAIAD 447


>gi|145501226|ref|XP_001436595.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
 gi|124403736|emb|CAK69198.1| unnamed protein product [Paramecium tetraurelia]
          Length = 610

 Score = 74.3 bits (181), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 59/256 (23%), Positives = 114/256 (44%), Gaps = 12/256 (4%)

Query: 89  ESTSSNHTKALARLLRATVYIFTSQSTKAIEDLTQLVEDTSVDPKIKVNAHIKRAVVHLH 148
           E     + KA     +  + +F SQ     E L      +  DP   +N      +  L 
Sbjct: 341 EGLKITYNKAFIHYCKG-IALFESQQLN--EALNSFKIASQFDPNFGLNNFNVGNI--LR 395

Query: 149 AASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVAR 208
                  A   +D A K DPN+  +Y  +  I C   +Y+ AL  L++ + +NPN+  A 
Sbjct: 396 TQQKLQDALIYMDSAIKSDPNLLKAYTGKSLILCEMKKYDLALDCLEEVLKINPNYEKAY 455

Query: 209 AQRHFVVHKMIVPGDRERVEQSLKEFRNFVDTHSNVVEACTLFAQVLVDQEDFDGAEEYF 268
             R   + +      + + ++++++    +   +  V A TL    L   + +  A + +
Sbjct: 456 HLRGNCLKQ------QRKFQEAIQQLDKAIALDNKYVNAYTLKGNCLSQLKQYSKALQCY 509

Query: 269 NRSIRVDPENASLYVHRAMLMLQARGNVDEAIKLIEKAISIDKSCMFAYETLGTIEVQRG 328
           ++++++D +   +Y+++ +L LQ      EAI+  + A+ ID +C  AY+  G I     
Sbjct: 510 DQALQIDKQCIEVYINKGIL-LQDLKKFKEAIEQYDLALRIDPNCPLAYKNKGVILETMK 568

Query: 329 RLEEAVKCFNKALPLA 344
           + EEA+ C+  A+ L 
Sbjct: 569 KFEEAIICYQLAIELG 584



 Score = 55.8 bits (133), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 62/287 (21%), Positives = 129/287 (44%), Gaps = 22/287 (7%)

Query: 124 LVEDTSVDPKIKVNAHIKRAVVHLHAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCL 183
           L+ D +++   +      R    L     +  A   L+E  K+  N A  +Y +G     
Sbjct: 303 LLYDQAINYDKRQTCAYARKATLLVKFKIYDAALETLNEGLKITYNKAFIHYCKGIALFE 362

Query: 184 FGQYEEALRNLDKTIALNPNFHVARAQRHFVVHKMIVPGDRERVEQSLKEFRNFVDT--- 240
             Q  EAL +       +PNF +     +F V      G+  R +Q L++   ++D+   
Sbjct: 363 SQQLNEALNSFKIASQFDPNFGL----NNFNV------GNILRTQQKLQDALIYMDSAIK 412

Query: 241 -HSNVVEACTLFAQVLVDQEDFDGAEEYFNRSIRVDPENASLYVHRAMLMLQARGNVDEA 299
              N+++A T  + +L + + +D A +     ++++P     Y  R   + Q R    EA
Sbjct: 413 SDPNLLKAYTGKSLILCEMKKYDLALDCLEEVLKINPNYEKAYHLRGNCLKQQR-KFQEA 471

Query: 300 IKLIEKAISIDKSCMFAYETLGTIEVQRGRLEEAVKCFNKALPLARDEAELSHIYSLRDA 359
           I+ ++KAI++D   + AY   G    Q  +  +A++C+++AL + +   E   +Y  +  
Sbjct: 472 IQQLDKAIALDNKYVNAYTLKGNCLSQLKQYSKALQCYDQALQIDKQCIE---VYINKGI 528

Query: 360 AIAQMK----VCERYNIKKKVSPRSQNITKNEKLAIKQLRENNDIII 402
            +  +K      E+Y++  ++ P      KN+ + ++ +++  + II
Sbjct: 529 LLQDLKKFKEAIEQYDLALRIDPNCPLAYKNKGVILETMKKFEEAII 575



 Score = 39.3 bits (90), Expect = 5.0,   Method: Compositional matrix adjust.
 Identities = 33/135 (24%), Positives = 61/135 (45%), Gaps = 7/135 (5%)

Query: 84  CTEEIESTSSNHTKALARLLRATVYIFTSQSTKAIEDLTQLVEDTSVDPKIKVNAHIKRA 143
           C EE+   + N+ KA    LR        Q  K  E + QL +  ++D K  VNA+  + 
Sbjct: 440 CLEEVLKINPNYEKAYH--LRGNC---LKQQRKFQEAIQQLDKAIALDNKY-VNAYTLKG 493

Query: 144 VVHLHAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPN 203
              L     ++KA    D+A ++D    + Y  +G +     +++EA+   D  + ++PN
Sbjct: 494 NC-LSQLKQYSKALQCYDQALQIDKQCIEVYINKGILLQDLKKFKEAIEQYDLALRIDPN 552

Query: 204 FHVARAQRHFVVHKM 218
             +A   +  ++  M
Sbjct: 553 CPLAYKNKGVILETM 567


>gi|428309117|ref|YP_007120094.1| hypothetical protein Mic7113_0778 [Microcoleus sp. PCC 7113]
 gi|428250729|gb|AFZ16688.1| tetratricopeptide repeat protein [Microcoleus sp. PCC 7113]
          Length = 1506

 Score = 74.3 bits (181), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 98/422 (23%), Positives = 180/422 (42%), Gaps = 50/422 (11%)

Query: 104  RATVYIFTSQSTKAIEDLTQLVEDTSVDPKIKVNAHIKRAVVHLHAASDFTKAFADLDEA 163
            R   Y    + T+A+ DL   +   ++DPK       +     L    D+ KA +D ++A
Sbjct: 981  RGDTYQRMKRYTEAVADLNTAL---NIDPKYAFALGSRGETYRL--MGDYDKALSDFNQA 1035

Query: 164  EKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQRHFVVHKMIVPGD 223
             K+DP        RG+ Y   G Y++AL + ++ + L+       A R      M   G+
Sbjct: 1036 LKLDPQYIFVLGSRGETYQSIGNYDKALVDFNQALKLDSKLEWVFADRGETYRLM---GE 1092

Query: 224  RERVEQSLKEFRNFVDTHSNVVEACTLFAQVLVDQEDFDGAEEYFNRSIRVDPENASLYV 283
              +   +L +F + ++ + N   A     Q+   Q+ ++ A   FN++I +DP+   +  
Sbjct: 1093 YTK---ALMDFNSAINLNPNYALAIANRGQIYKQQKRYNDALNDFNQAIELDPQQHWIIP 1149

Query: 284  HRAMLMLQARGNVDEAIKLIEKAISIDKSCMFAYETLGTIEVQRGRLEEAVKCFNKALPL 343
             R +   +  G  ++A+ +  +AI+++   + A  + G       R +EA+  FN+ + L
Sbjct: 1150 ER-IETYRLMGGYEKALTIFNQAINLNPKNVGALASRGATYHFMERYKEALGDFNRTIQL 1208

Query: 344  ARDEAELSHIYSLRDAAIAQMKVCER----YNIKKKVSPRS-QNITKNEKLAIKQLRENN 398
               +++ +     R    +QM+  E+     N   ++ P S   I    +  ++ LR   
Sbjct: 1209 ---DSKNTFALGSRGQIYSQMEQYEKALADLNKAIELDPTSDWAIISRGETYLELLRYEE 1265

Query: 399  DIIIRPADKGGKTVVMDKADYTQKMTSILNSNDYEIIPGDPTKTIEESEKYGNLENESGQ 458
             +                AD+T+ M   LN  +   + G       E E+Y         
Sbjct: 1266 AL----------------ADFTRIME--LNPKNVSALWGRGN-AYREMERY--------- 1297

Query: 459  KHAASDFTKAFADLDEAEKVDP-NVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFH 517
              A +DF +A   L    K+D   ++D   Q+G +Y   G+YEEAL N   T+ LNP  +
Sbjct: 1298 DKALNDFNQAI-KLGSDSKLDKLTMSDLIAQQGWLYRQMGRYEEALANFKNTLELNPKQY 1356

Query: 518  VA 519
            +A
Sbjct: 1357 LA 1358



 Score = 59.3 bits (142), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 102/443 (23%), Positives = 178/443 (40%), Gaps = 76/443 (17%)

Query: 104  RATVYIFTSQSTKAIEDLTQLVEDTSVDPKIKVNAHIKRAVVHLHAASDFTKAFADLDEA 163
            R   Y       KA+ D  Q ++   +DP+  +     R   +  +  ++ KA  D ++A
Sbjct: 1015 RGETYRLMGDYDKALSDFNQALK---LDPQY-IFVLGSRGETY-QSIGNYDKALVDFNQA 1069

Query: 164  EKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQRHFVVHK------ 217
             K+D  +   +  RG+ Y L G+Y +AL + +  I LNPN+ +A A R  +  +      
Sbjct: 1070 LKLDSKLEWVFADRGETYRLMGEYTKALMDFNSAINLNPNYALAIANRGQIYKQQKRYND 1129

Query: 218  ----------------MIVPGDRERVE---------QSLKEFRNFVDTHSNVVEACTLFA 252
                             I+P   ER+E         ++L  F   ++ +   V A     
Sbjct: 1130 ALNDFNQAIELDPQQHWIIP---ERIETYRLMGGYEKALTIFNQAINLNPKNVGALASRG 1186

Query: 253  QVLVDQEDFDGAEEYFNRSIRVDPENASLYVHRAMLMLQARGNVDEAIKLIEKAISIDKS 312
                  E +  A   FNR+I++D +N      R  +  Q     ++A+  + KAI +D +
Sbjct: 1187 ATYHFMERYKEALGDFNRTIQLDSKNTFALGSRGQIYSQME-QYEKALADLNKAIELDPT 1245

Query: 313  CMFAYETLGTIEVQRGRLEEAVKCFNKALPLARDEAELSHIYSLRDAAIAQMKVCERYNI 372
              +A  + G   ++  R EEA+  F + + L  +   +S ++  R  A  +M   ERY+ 
Sbjct: 1246 SDWAIISRGETYLELLRYEEALADFTRIMEL--NPKNVSALWG-RGNAYREM---ERYD- 1298

Query: 373  KKKVSPRSQNI-----TKNEKLAIKQLRENNDIIIRPADKGGKTVVMDKADYTQKMTSIL 427
             K ++  +Q I     +K +KL +  L      + R   +       ++A    K T  L
Sbjct: 1299 -KALNDFNQAIKLGSDSKLDKLTMSDLIAQQGWLYRQMGR------YEEALANFKNTLEL 1351

Query: 428  NSNDYEIIPGDPTKTIEESEKYGNLENESGQKHAASDFTKAFADLDEAEKVDPNVADSYY 487
            N   Y  + G       E  +Y    NE     A  +FT A        ++D       Y
Sbjct: 1352 NPKQYLALEGRG-----EIYRYMRRYNE-----ALDNFTFAL-------ELDTKNDWPIY 1394

Query: 488  QRGQIYCLFGQYEEALRNLDKTI 510
             R  +Y   GQ ++   +L+K I
Sbjct: 1395 NRALVYLALGQKDQGQADLNKAI 1417



 Score = 58.2 bits (139), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 81/363 (22%), Positives = 152/363 (41%), Gaps = 42/363 (11%)

Query: 153  FTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQRH 212
            + +A  D ++A K+DP        RG  Y    +Y EA+ +L+  + ++P +  A   R 
Sbjct: 957  YEEAVDDFNKAIKIDPKNQYVLAGRGDTYQRMKRYTEAVADLNTALNIDPKYAFALGSRG 1016

Query: 213  FVVHKMIVPGDRERVEQSLKEFRNFVDTHSNVVEACTLFAQVLVDQEDFDGAEEYFNRSI 272
                 M   GD ++   +L +F   +      +       +      ++D A   FN+++
Sbjct: 1017 ETYRLM---GDYDK---ALSDFNQALKLDPQYIFVLGSRGETYQSIGNYDKALVDFNQAL 1070

Query: 273  RVDPENASLYVHRAMLMLQARGNVDEAIKLIEKAISIDKSCMFAYETLGTIEVQRGRLEE 332
            ++D +   ++  R     +  G   +A+     AI+++ +   A    G I  Q+ R  +
Sbjct: 1071 KLDSKLEWVFADRGE-TYRLMGEYTKALMDFNSAINLNPNYALAIANRGQIYKQQKRYND 1129

Query: 333  AVKCFNKALPLARDEAELSHIYSLRDAAIAQMKVCERYNIKKKVSPRSQNITKNEKLAIK 392
            A+  FN+A+ L   + +   I   R   I   ++   Y  +K ++  +Q I  N K    
Sbjct: 1130 ALNDFNQAIEL---DPQQHWIIPER---IETYRLMGGY--EKALTIFNQAINLNPK---- 1177

Query: 393  QLRENNDIIIRPADKGGKTVVMDKADYTQKMTSILNSNDYEIIPGDPTKTIEESEKYGNL 452
                N   +   A +G     M++               Y+   GD  +TI+   K    
Sbjct: 1178 ----NVGAL---ASRGATYHFMER---------------YKEALGDFNRTIQLDSKNTFA 1215

Query: 453  ENESGQKHAASD-FTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIA 511
                GQ ++  + + KA ADL++A ++DP    +   RG+ Y    +YEEAL +  + + 
Sbjct: 1216 LGSRGQIYSQMEQYEKALADLNKAIELDPTSDWAIISRGETYLELLRYEEALADFTRIME 1275

Query: 512  LNP 514
            LNP
Sbjct: 1276 LNP 1278



 Score = 48.9 bits (115), Expect = 0.008,   Method: Compositional matrix adjust.
 Identities = 27/95 (28%), Positives = 50/95 (52%), Gaps = 1/95 (1%)

Query: 430  NDYEIIPGDPTKTIEESEKYGNLENESGQKHAA-SDFTKAFADLDEAEKVDPNVADSYYQ 488
             DY+    D  + ++   +Y  +    G+ + +  ++ KA  D ++A K+D  +   +  
Sbjct: 1023 GDYDKALSDFNQALKLDPQYIFVLGSRGETYQSIGNYDKALVDFNQALKLDSKLEWVFAD 1082

Query: 489  RGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQR 523
            RG+ Y L G+Y +AL + +  I LNPN+ +A A R
Sbjct: 1083 RGETYRLMGEYTKALMDFNSAINLNPNYALAIANR 1117



 Score = 46.6 bits (109), Expect = 0.033,   Method: Compositional matrix adjust.
 Identities = 48/178 (26%), Positives = 82/178 (46%), Gaps = 21/178 (11%)

Query: 54   GDTNESHELD------LLSKAKRAFEHEDYLTAIRHCTEEIESTSSNHTKALARLLRATV 107
            GD N + +LD      L S+ +   + E Y  A+    + IE    + T   A + R   
Sbjct: 1200 GDFNRTIQLDSKNTFALGSRGQIYSQMEQYEKALADLNKAIEL---DPTSDWAIISRGET 1256

Query: 108  YIFTSQSTKAIEDLTQLVEDTSVDPKIKVNAHIKRAVVHLHAASDFTKAFADLDEAEKVD 167
            Y+   +  +A+ D T+++E   ++PK  V+A   R   +      + KA  D ++A K+ 
Sbjct: 1257 YLELLRYEEALADFTRIME---LNPK-NVSALWGRGNAY-REMERYDKALNDFNQAIKLG 1311

Query: 168  PN-------VADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQRHFVVHKM 218
             +       ++D   Q+G +Y   G+YEEAL N   T+ LNP  ++A   R  +   M
Sbjct: 1312 SDSKLDKLTMSDLIAQQGWLYRQMGRYEEALANFKNTLELNPKQYLALEGRGEIYRYM 1369


>gi|428210636|ref|YP_007083780.1| serine/threonine protein kinase [Oscillatoria acuminata PCC 6304]
 gi|427999017|gb|AFY79860.1| serine/threonine protein kinase [Oscillatoria acuminata PCC 6304]
          Length = 702

 Score = 74.3 bits (181), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 85/410 (20%), Positives = 168/410 (40%), Gaps = 67/410 (16%)

Query: 133 KIK-VNA----HIKRAVVHLHAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQY 187
           KIK VNA    H    + HL   S + +A    + A ++  +  +++ ++G       Q 
Sbjct: 328 KIKSVNASELYHQGHTLYHL---SRYEEALKRYENAIEIKADYVEAWKEKGDTLSRLNQN 384

Query: 188 EEALRNLDKTIALNPNFHVARAQRHFVVHKMIVPGDRERVEQSLKEFRNFVDTHSNVVEA 247
           E A+   D+ I LNP +  A  +R  V++++      +R + ++  F   ++      EA
Sbjct: 385 EAAMDAYDRAIQLNPEYLDAWIRRGDVLNRL------QRYDGAIASFEKAIELVPESAEA 438

Query: 248 CTLFAQVLVDQEDFDGAEEYFNRSIRVDPENASLYVHRAMLMLQARGNVDEAIKLIEKAI 307
                  L+  + ++ A   +++++   PE++  +  R     Q + + + A+K  +K++
Sbjct: 439 WNGKGNTLLSLQRYEEAIAAYDQALEFQPESSEAWYARGWAFHQLK-DYEAALKSYDKSV 497

Query: 308 SIDKSCMFAYETLGTIEVQRGRLEEAVKCFNKALPLARDEAELSHIYSLRDAAIAQM--- 364
                    +   G + +Q  + +EAV+ ++KA+   R +   +  +  R  A+ Q+   
Sbjct: 498 EYQFDYAVGWYNRGNVLMQLNQAKEAVESYDKAV---RFQPNYAEAWYSRGNALMQLNDA 554

Query: 365 -KVCERYNIKKKVSPRSQNITKNEKLAIKQLRENNDIIIRPADKGGKTVVMDKADYT--- 420
            +  + Y    K+    Q    +   A+ QLR     I    +   + + + K DY    
Sbjct: 555 SEAAKSYERAVKLQTNYQEAWYSLGWALHQLRRYEQAI----EAYNQAIDLKKIDYRAWY 610

Query: 421 QKMTSILNSNDYEIIPGDPTKTIEESEKYGNLENESGQKHAASDFTKAFADLDEAEKVDP 480
            +  ++ N N Y+                                 +A +  +EA  V P
Sbjct: 611 NRGNALYNLNRYQ---------------------------------EAVSSYNEAAYVKP 637

Query: 481 NVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVA-----RAQRHF 525
           + A+S+Y +G      GQYEEA+   D+ +   PN+  A     RAQR  
Sbjct: 638 DHAESWYGKGNSLSTLGQYEEAILAYDRALRYQPNYRAAKEGKERAQRQI 687



 Score = 48.1 bits (113), Expect = 0.012,   Method: Compositional matrix adjust.
 Identities = 35/117 (29%), Positives = 54/117 (46%), Gaps = 11/117 (9%)

Query: 116 KAIEDLTQLVEDTSVDPKIKVNAHIKRAVVHLHAASDFTKAFADLDEAEKVDPNVADSYY 175
           +AIE   Q ++   +D +   N         L+  + + +A +  +EA  V P+ A+S+Y
Sbjct: 590 QAIEAYNQAIDLKKIDYRAWYNRGNA-----LYNLNRYQEAVSSYNEAAYVKPDHAESWY 644

Query: 176 QRGQIYCLFGQYEEALRNLDKTIALNPNFHVA-----RAQRHFVVH-KMIVPGDRER 226
            +G      GQYEEA+   D+ +   PN+  A     RAQR      K   PGD  R
Sbjct: 645 GKGNSLSTLGQYEEAILAYDRALRYQPNYRAAKEGKERAQRQIKQREKRDSPGDGNR 701


>gi|254410950|ref|ZP_05024728.1| tetratricopeptide repeat domain protein [Coleofasciculus
           chthonoplastes PCC 7420]
 gi|196182305|gb|EDX77291.1| tetratricopeptide repeat domain protein [Coleofasciculus
           chthonoplastes PCC 7420]
          Length = 799

 Score = 74.3 bits (181), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 58/253 (22%), Positives = 111/253 (43%), Gaps = 14/253 (5%)

Query: 150 ASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARA 209
           A DF  A A+ D+A +  P+   +++ RG      G+YEEA+ N DK + + P+FH A  
Sbjct: 172 AGDFLGAIANYDKALQFKPDNHYAWFMRGVALADLGKYEEAIANYDKALQIQPDFHQAWY 231

Query: 210 QRHFVVHKMIVPGDRERVEQSLKEFRNFVDTHSNVVEACTLFAQVLVDQEDFDGAEEYFN 269
            R   +       D    E+++  +   +    +  +A       L D  +++ A   ++
Sbjct: 232 NRGVAL------ADLGEYEEAIANYDKALQIQPDFHQAWYNRGVALADLGEYEEAIANYD 285

Query: 270 RSIRVDPENASLYVHRAMLMLQARGNVDEAIKLIEKAISIDKSCMFAYETLGTIEVQRGR 329
           +++++ P+    + +R +  L   G  +EAI   +KA+ I      A+   G      G 
Sbjct: 286 KALQIQPDKHEAWYNRGV-ALGNLGKYEEAIANYDKALQIQPDFHQAWFMRGVALADLGE 344

Query: 330 LEEAVKCFNKALPLARDEAELSHIYSLRDAAIAQMKVCER----YNIKKKVSPRSQNITK 385
            EEA+  ++KAL    D     + ++ R  A+A +   E     ++   ++ P       
Sbjct: 345 YEEAIANYDKALQFKPD---FHYAWNNRGVALADLGKYEEAIASFDKALQIKPDLHQAWL 401

Query: 386 NEKLAIKQLRENN 398
           N  +A+ + R  N
Sbjct: 402 NRGIAVGESRHYN 414



 Score = 58.5 bits (140), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 37/127 (29%), Positives = 63/127 (49%), Gaps = 12/127 (9%)

Query: 399 DIIIRPADKGGKTVVMDKADYTQKMTSILNSNDYEIIPGDPTKTIE--ESEKYGNLENES 456
           +++++PA KG + V +++       TS+           D   +IE  +SE+     N  
Sbjct: 117 ELLMKPAGKGEEVVAVEERKRVSAETSL----------SDSISSIENSDSEQAEVWFNRG 166

Query: 457 GQKHAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNF 516
            Q+  A DF  A A+ D+A +  P+   +++ RG      G+YEEA+ N DK + + P+F
Sbjct: 167 NQQFDAGDFLGAIANYDKALQFKPDNHYAWFMRGVALADLGKYEEAIANYDKALQIQPDF 226

Query: 517 HVARAQR 523
           H A   R
Sbjct: 227 HQAWYNR 233



 Score = 58.5 bits (140), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 58/253 (22%), Positives = 98/253 (38%), Gaps = 42/253 (16%)

Query: 275 DPENASLYVHRAMLMLQARGNVDEAIKLIEKAISIDKSCMFAYETLGTIEVQRGRLEEAV 334
           D E A ++ +R      A G+   AI   +KA+       +A+   G      G+ EEA+
Sbjct: 155 DSEQAEVWFNRGNQQFDA-GDFLGAIANYDKALQFKPDNHYAWFMRGVALADLGKYEEAI 213

Query: 335 KCFNKALPLARDEAELSHIYSLRDAAIAQMKVCER----YNIKKKVSPRSQNITKNEKLA 390
             ++KAL +  D       +  R  A+A +   E     Y+   ++ P       N  +A
Sbjct: 214 ANYDKALQIQPD---FHQAWYNRGVALADLGEYEEAIANYDKALQIQPDFHQAWYNRGVA 270

Query: 391 IKQLRENNDIIIRPADKGGKTVVMDKADYTQKMTSILNSNDYEIIPGDPTKTIEESEKYG 450
           +  L E  + I               A+Y + +         +I P             G
Sbjct: 271 LADLGEYEEAI---------------ANYDKAL---------QIQPDKHEAWYNRGVALG 306

Query: 451 NLENESGQKHAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTI 510
           NL            + +A A+ D+A ++ P+   +++ RG      G+YEEA+ N DK +
Sbjct: 307 NL----------GKYEEAIANYDKALQIQPDFHQAWFMRGVALADLGEYEEAIANYDKAL 356

Query: 511 ALNPNFHVARAQR 523
              P+FH A   R
Sbjct: 357 QFKPDFHYAWNNR 369



 Score = 54.3 bits (129), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 33/149 (22%), Positives = 72/149 (48%), Gaps = 6/149 (4%)

Query: 145 VHLHAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNF 204
           V L    ++ +A A+ D+A ++ P+  +++Y RG      G+YEEA+ N DK + + P+F
Sbjct: 269 VALADLGEYEEAIANYDKALQIQPDKHEAWYNRGVALGNLGKYEEAIANYDKALQIQPDF 328

Query: 205 HVARAQRHFVVHKMIVPGDRERVEQSLKEFRNFVDTHSNVVEACTLFAQVLVDQEDFDGA 264
           H A   R   +       D    E+++  +   +    +   A       L D   ++ A
Sbjct: 329 HQAWFMRGVAL------ADLGEYEEAIANYDKALQFKPDFHYAWNNRGVALADLGKYEEA 382

Query: 265 EEYFNRSIRVDPENASLYVHRAMLMLQAR 293
              F++++++ P+    +++R + + ++R
Sbjct: 383 IASFDKALQIKPDLHQAWLNRGIAVGESR 411



 Score = 53.9 bits (128), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 59/271 (21%), Positives = 106/271 (39%), Gaps = 42/271 (15%)

Query: 257 DQEDFDGAEEYFNRSIRVDPENASLYVHRAMLMLQARGNVDEAIKLIEKAISIDKSCMFA 316
           D  DF GA   ++++++  P+N   +  R +  L   G  +EAI   +KA+ I      A
Sbjct: 171 DAGDFLGAIANYDKALQFKPDNHYAWFMRGV-ALADLGKYEEAIANYDKALQIQPDFHQA 229

Query: 317 YETLGTIEVQRGRLEEAVKCFNKALPLARDEAELSHIYSLRDAAIAQMKVCER----YNI 372
           +   G      G  EEA+  ++KAL +  D       +  R  A+A +   E     Y+ 
Sbjct: 230 WYNRGVALADLGEYEEAIANYDKALQIQPD---FHQAWYNRGVALADLGEYEEAIANYDK 286

Query: 373 KKKVSPRSQNITKNEKLAIKQLRENNDIIIRPADKGGKTVVMDKADYTQKMTSILNSNDY 432
             ++ P       N  +A+  L +  + I               A+Y + +         
Sbjct: 287 ALQIQPDKHEAWYNRGVALGNLGKYEEAI---------------ANYDKAL--------- 322

Query: 433 EIIPGDPTKTIEESEKYGNLENESGQKHAASDFTKAFADLDEAEKVDPNVADSYYQRGQI 492
           +I P              +L           ++ +A A+ D+A +  P+   ++  RG  
Sbjct: 323 QIQPDFHQAWFMRGVALADL----------GEYEEAIANYDKALQFKPDFHYAWNNRGVA 372

Query: 493 YCLFGQYEEALRNLDKTIALNPNFHVARAQR 523
               G+YEEA+ + DK + + P+ H A   R
Sbjct: 373 LADLGKYEEAIASFDKALQIKPDLHQAWLNR 403


>gi|401623941|gb|EJS42020.1| tom70p [Saccharomyces arboricola H-6]
          Length = 617

 Score = 74.3 bits (181), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 65/240 (27%), Positives = 116/240 (48%), Gaps = 15/240 (6%)

Query: 135 KVNAHIKRAVVHLHAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNL 194
           +VN++I  A++ +   +D T+     D+A K+DPN +  YY RGQ+  +   Y++A ++ 
Sbjct: 362 RVNSYIYMALI-MADRNDSTEYHNYFDKALKLDPNNSSVYYHRGQMNFILQNYDQAGKDF 420

Query: 195 DKTIALNPNFHVARAQRHFVVHKMIVPGDRERVEQSLKEFRNFVDTHSNVVEACTLFAQV 254
           DK   L+P       Q   + ++     D E +    K  R F +      E    FA++
Sbjct: 421 DKAKELDPENIFPYIQLACLAYRENKFDDCETLFSEAK--RKFPEAP----EVPNFFAEI 474

Query: 255 LVDQEDFDGAEEYFNRSIRVDPENASLYVHRAMLMLQAR--------GNVDEAIKLIEKA 306
           L D+ DFD A + ++ +I ++ +   +YV  A L+ +A          N  EA  L+EKA
Sbjct: 475 LTDKNDFDKALKQYDLAIELEDKLDGIYVGIAPLVGKATLLTRNPTVENFIEATNLLEKA 534

Query: 307 ISIDKSCMFAYETLGTIEVQRGRLEEAVKCFNKALPLARDEAELSHIYSLRDAAIAQMKV 366
             +D     A   L  +++Q+  ++EA+  F ++  LAR   E     +  +AA  Q ++
Sbjct: 535 SKLDPRSEQAKIGLAQMKLQQEDIDEAITLFEESADLARTMEEKLQAITFAEAAKVQQRI 594



 Score = 40.0 bits (92), Expect = 3.2,   Method: Compositional matrix adjust.
 Identities = 17/43 (39%), Positives = 27/43 (62%)

Query: 472 LDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNP 514
            D+A K+DPN +  YY RGQ+  +   Y++A ++ DK   L+P
Sbjct: 386 FDKALKLDPNNSSVYYHRGQMNFILQNYDQAGKDFDKAKELDP 428


>gi|398821175|ref|ZP_10579657.1| tetratricopeptide repeat protein [Bradyrhizobium sp. YR681]
 gi|398228155|gb|EJN14295.1| tetratricopeptide repeat protein [Bradyrhizobium sp. YR681]
          Length = 310

 Score = 74.3 bits (181), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 60/223 (26%), Positives = 105/223 (47%), Gaps = 10/223 (4%)

Query: 121 LTQLVEDTSVDPKIKVNAHIKRAVVHLHAASDFTKAFADLDEAEKVDPNVADSYYQRGQI 180
           L+ L E   +DP     A+  R  V+     D+ +A AD D+A K+DP++A +Y  RG+ 
Sbjct: 81  LSDLDEAVRLDPAYAC-AYNNRGRVYSFK-RDYDRAIADYDQAIKLDPSLALAYSNRGES 138

Query: 181 YCLFGQYEEALRNLDKTIALNPNFHVARAQRHFVVHKMIVPGDRERVEQSLKEFRNFVDT 240
               G  + A  + D  I  +PN+  A A R  V ++      R  +  +L ++   +  
Sbjct: 139 RFNKGDLDGAFADFDAAIRRDPNYATAYANRGLVYYR------RHDMVHALADYSMRIKL 192

Query: 241 HSNVVEACTLFAQVLVDQEDFDGAEEYFNRSIRVDPENASLYVHRAMLMLQARGNVDEAI 300
             +++ A      V  D E  D A   +  +IR+ P +A  + +R M+ L  +G+    +
Sbjct: 193 APDLL-AYIDRGNVYRDSEQLDRAAADYGEAIRIAPTDARGWRNRGMIRLY-QGDNKGGL 250

Query: 301 KLIEKAISIDKSCMFAYETLGTIEVQRGRLEEAVKCFNKALPL 343
              +KA+  D S +F++   G   ++ G  + A+  F KAL L
Sbjct: 251 ADYDKALQYDSSDVFSWNNRGQARLRLGDKQGAIADFRKALEL 293



 Score = 46.2 bits (108), Expect = 0.048,   Method: Compositional matrix adjust.
 Identities = 29/91 (31%), Positives = 45/91 (49%), Gaps = 4/91 (4%)

Query: 464 DFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQR 523
           D+ +A AD D+A K+DP++A +Y  RG+     G  + A  + D  I  +PN+  A A R
Sbjct: 110 DYDRAIADYDQAIKLDPSLALAYSNRGESRFNKGDLDGAFADFDAAIRRDPNYATAYANR 169

Query: 524 HFVWTSTLAELMAFSDEFM----IPKITYYI 550
             V+      + A +D  M     P +  YI
Sbjct: 170 GLVYYRRHDMVHALADYSMRIKLAPDLLAYI 200



 Score = 45.8 bits (107), Expect = 0.062,   Method: Compositional matrix adjust.
 Identities = 26/97 (26%), Positives = 48/97 (49%), Gaps = 12/97 (12%)

Query: 439 PTKTIEESEKYGNLENESGQKHAAS------------DFTKAFADLDEAEKVDPNVADSY 486
           P   I+      +  +E+G++ A +            +   A +DLDEA ++DP  A +Y
Sbjct: 39  PDARIKACSSVIDTRSETGKRFAGAYCNRGHGLTEKRELDAALSDLDEAVRLDPAYACAY 98

Query: 487 YQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQR 523
             RG++Y     Y+ A+ + D+ I L+P+  +A + R
Sbjct: 99  NNRGRVYSFKRDYDRAIADYDQAIKLDPSLALAYSNR 135


>gi|359461418|ref|ZP_09249981.1| TPR domain-containing protein [Acaryochloris sp. CCMEE 5410]
          Length = 784

 Score = 73.9 bits (180), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 97/414 (23%), Positives = 169/414 (40%), Gaps = 66/414 (15%)

Query: 131 DPKIKVNAHIKRAVVHLHAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEA 190
           +P   +N   KRA        D   A  D DEA  ++P  A +Y+ RG ++   G++E A
Sbjct: 29  NPDALINRANKRAT-----NGDLDGALGDFDEAIALNPAKATAYFNRGFLFNSLGKFEAA 83

Query: 191 LRNLDKTIALNPNFHVARAQRHFVVHKMIVPGDRERVEQSLKEFRNFVDTHSNVVEACTL 250
           + +  + I L P++  A  QR     +      R   +++++++   +  +   ++A   
Sbjct: 84  IHDFSEAIELLPDYDEAYFQRGNSYRQ------RGEFQRAIQDYSQAIRINPYCIKAYYK 137

Query: 251 FAQVLVDQEDFDGAEEYFNRSIRVDPENASLYVHRAMLMLQARGNVDEAIKLIEKAISID 310
            A    +  D  GA   F++ I   P++A+ Y  R M + Q+ G +++AI+    AI  +
Sbjct: 138 RADSRAELGDHPGALTDFSQVILRLPKDANAYCQRGMFLSQS-GELEKAIEDFTSAIEHN 196

Query: 311 KSCMFAYETLGTIEVQRGRLEEAVKCFNKAL---PLARDEAELSHIYSLRDAAIAQMKVC 367
                AY   G    Q G  E+A K F++AL   P    +A  +  Y+L     A + V 
Sbjct: 197 PRLADAYFHRGYCLAQMGEAEKASKDFSEALLHDP--NHQAAYTRAYALGMLKEAPVDVS 254

Query: 368 ERYNIKKKVSPRSQNITKNEKLAIKQLRENNDIIIRPADKGGKTVVMDKADYTQKMTSIL 427
                    SP S     +  L++  L E+  + + P        V D  D  +   +  
Sbjct: 255 ---------SPSS--TATDYPLSL--LEESVPVSVEP--------VEDSDDEQEPHPA-- 291

Query: 428 NSNDYEIIPGDPTKTIEESEKYGNLENESGQKHAASDFTKAFADLDEAEKVDPNVADSYY 487
                  +P +PT      E+  N         A SD++K   +       DP  + +YY
Sbjct: 292 ------TVPLEPTSMEGFFERANNRIQRGDLDGAISDYSKIIDN-------DPENSQAYY 338

Query: 488 QRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQRHFVWTSTLAELMAFSDEF 541
           QRGQ     G+ + A+ +L++ I             H+    +L  +  FS E 
Sbjct: 339 QRGQSLGALGESQAAMEDLNQAI-------------HWARVHSLGLIRDFSGEL 379



 Score = 57.8 bits (138), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 105/454 (23%), Positives = 188/454 (41%), Gaps = 51/454 (11%)

Query: 117 AIEDLTQLVEDTSVDPKIKVNAHIKRAVVHLHAASDFTKAFADLDEAEKVDPNVADSYYQ 176
           A+ D +Q++     D     NA+ +R +  L  + +  KA  D   A + +P +AD+Y+ 
Sbjct: 151 ALTDFSQVILRLPKD----ANAYCQRGMF-LSQSGELEKAIEDFTSAIEHNPRLADAYFH 205

Query: 177 RGQIYCL--FGQYEEALRNLDKTIALNPNFHVARAQRHFVVHKMIVPGDRERVEQSLKEF 234
           RG  YCL   G+ E+A ++  + +  +PN   A  + + +      P D      +  ++
Sbjct: 206 RG--YCLAQMGEAEKASKDFSEALLHDPNHQAAYTRAYALGMLKEAPVDVSSPSSTATDY 263

Query: 235 RNFVDTHSNVVEACTLFAQVLVDQEDFDGAEEYFNRSIRVDPENASLYVHRAMLMLQARG 294
                  S + E+  +  + +   ED D  +E    ++ ++P +   +  RA   +Q RG
Sbjct: 264 -----PLSLLEESVPVSVEPV---EDSDDEQEPHPATVPLEPTSMEGFFERANNRIQ-RG 314

Query: 295 NVDEAIKLIEKAISIDKSCMFAYETLGTIEVQRGRLEEAVKCFNKALPLARDEAELSHIY 354
           ++D AI    K I  D     AY   G      G  + A++  N+A+  AR    +  + 
Sbjct: 315 DLDGAISDYSKIIDNDPENSQAYYQRGQSLGALGESQAAMEDLNQAIHWAR----VHSLG 370

Query: 355 SLRDAAIAQMKVCE--RYNIKKKV--SPRSQNITKNEKLAIKQLRE----NNDIIIRPA- 405
            +RD +       E  + ++K+    SP ++        A  QL+      ND+I   + 
Sbjct: 371 LIRDFSGELSTTLETLKQDLKELSYQSPFAKTHPLPPGTATDQLQSADPPANDVIDSSSE 430

Query: 406 --DKGG--KTVVMDKADYTQKMTSILNS------NDYEIIPG----DPTKTIEESEKYGN 451
             D  G  KTV    A+ T    +   S       D  I P     +P+ ++ + E    
Sbjct: 431 QPDASGKLKTVEHSNAEKTNSSNTPPTSAKESVVTDIVIDPHFSELEPSSSVAQGEPPVP 490

Query: 452 LENESGQKH------AASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRN 505
               S Q         A    +A A    A + +P  A++++ RGQ   L G  + A+ +
Sbjct: 491 PPPASPQPSPPAPEITAPTLERAIAQHTRAIEQNPLDAEAFFNRGQSRALGGDLQGAIED 550

Query: 506 LDKTIALNPNFHVARAQRHFVWTSTLAELMAFSD 539
             +TI L+PN   A  +R    ++   E  A +D
Sbjct: 551 YSRTIRLDPNNREAYVKRARCLSALGDEAAAQAD 584


>gi|427723910|ref|YP_007071187.1| hypothetical protein Lepto7376_2051 [Leptolyngbya sp. PCC 7376]
 gi|427355630|gb|AFY38353.1| Tetratricopeptide TPR_1 repeat-containing protein [Leptolyngbya sp.
           PCC 7376]
          Length = 441

 Score = 73.9 bits (180), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 65/225 (28%), Positives = 108/225 (48%), Gaps = 10/225 (4%)

Query: 128 TSVDPKIKVNAHIKRAVVHLHAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQY 187
           T  DP   V A+    +V  +   D   A A   EA +++P   D+Y+Q    Y + GQ 
Sbjct: 120 TQFDPTF-VEAYYNLGLVS-YDLGDINSAIAAFGEAIRLEPEFVDAYFQLALAYDVQGQS 177

Query: 188 EEALRNLDKTIALNPNFHVARAQRHFVVHKMIVPGDRERVEQSLKEFRNFVDTHSNVVEA 247
             A  N  KT+ L+ N +VA A  +     +++  D ER  +++  F   ++   +   A
Sbjct: 178 SLAQTNYIKTLELD-NTYVA-AHNNL---GILLAAD-ERTAEAIATFEEAIELDPDYAPA 231

Query: 248 CTLFAQVLVDQEDFDGAEEYFNRSIRVDPENASLYVHRAMLMLQARGNVDEAIKLIEKAI 307
                 + + Q +F+ A E    +  +DP+NA    H  +L+ +A  N D A K  E++I
Sbjct: 232 HYQLGLLYLKQNEFELALEAIGSAASLDPDNALAQYHYGLLLAEAE-NYDGAAKRFERSI 290

Query: 308 SIDKSCMFAYETLGTIEVQRGRLEEAVKCFNKALPLARDEAELSH 352
            I+ + + AY  LG  E+  G L++A+  F +AL L   +  LSH
Sbjct: 291 DINPTNVSAYRQLGVAELANGDLDDALVAFQEALNLDPSD-PLSH 334



 Score = 39.3 bits (90), Expect = 6.0,   Method: Compositional matrix adjust.
 Identities = 29/86 (33%), Positives = 46/86 (53%), Gaps = 3/86 (3%)

Query: 441 KTIEESEKYGNLENESGQKHAASDFT-KAFADLDEAEKVDPNVADSYYQRGQIYCLFGQY 499
           KT+E    Y    N  G   AA + T +A A  +EA ++DP+ A ++YQ G +Y    ++
Sbjct: 186 KTLELDNTYVAAHNNLGILLAADERTAEAIATFEEAIELDPDYAPAHYQLGLLYLKQNEF 245

Query: 500 EEALRNLDKTIALNPNFHVARAQRHF 525
           E AL  +    +L+P+   A AQ H+
Sbjct: 246 ELALEAIGSAASLDPD--NALAQYHY 269


>gi|113478135|ref|YP_724196.1| sulfotransferase [Trichodesmium erythraeum IMS101]
 gi|110169183|gb|ABG53723.1| sulfotransferase [Trichodesmium erythraeum IMS101]
          Length = 887

 Score = 73.9 bits (180), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 49/189 (25%), Positives = 89/189 (47%), Gaps = 9/189 (4%)

Query: 156 AFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQRHFVV 215
           A     +A +++PN    YY  G+  C   +YEEA+    + I ++PN +       F  
Sbjct: 368 AIYSYQKAIEINPNNYWFYYSLGKALCKLSRYEEAITAYQRGIKIDPNLY-------FAY 420

Query: 216 HKMIVP-GDRERVEQSLKEFRNFVDTHSNVVEACTLFAQVLVDQEDFDGAEEYFNRSIRV 274
           H + V   + +R  Q++  +R  +    +   +     ++ +  +++D A E +  +I  
Sbjct: 421 HNLGVALVELKRWNQAIVAYRQAIKIKPDSYWSHYNLGEIFLKLQEWDKAVETYRYAIEN 480

Query: 275 DPENASLYVHRAMLMLQARGNVDEAIKLIEKAISIDKSCMFAYETLGTIEVQRGRLEEAV 334
           +P N+  Y     ++L+ +G + EAI    KAI I       Y  LG I ++ G  EEA+
Sbjct: 481 NP-NSPWYYQYLGIVLRKQGKIQEAIACYRKAIEIKPDWHRFYSLLGDILLEIGDSEEAI 539

Query: 335 KCFNKALPL 343
            C+ KA+ L
Sbjct: 540 SCYIKAIKL 548



 Score = 60.1 bits (144), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 79/361 (21%), Positives = 154/361 (42%), Gaps = 44/361 (12%)

Query: 162 EAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQRHFVVHKMIVP 221
           EA  + PN+   Y   G+I+    + E A    ++ ++L    H  +A ++    K ++ 
Sbjct: 100 EAIGIKPNIPGFYRNLGKIWQELDKVELARDCQEQALSLEA--HYPQASKYLKQGKKLLE 157

Query: 222 -GDRERVEQSLKEFRNFVDTHSNVVEACTLFAQVLVDQEDFDGAEEYFNRSIRVDPENAS 280
            G+RE   +++  F+  ++ + ++V+A      + +  +DF+ A  Y+ ++I + P+   
Sbjct: 158 NGERE---EAIAYFQKAINFNPSLVDAYQNLGDISLKTKDFNEAINYYQKAIELKPD--- 211

Query: 281 LYV--HRAMLMLQARGNVDEAIKLIEKAISIDKSCMFAYETLGTIEVQRGRLEEAVKCFN 338
           L++  ++   + Q  G +D A      AI ++ S +++Y+ LG I   +  L+ A  C+ 
Sbjct: 212 LWIVHYKLGKLFQEIGELDTATIEFNLAIELNPSFIYSYKNLGDILHHKKDLDVAKNCYK 271

Query: 339 KALPLARDEAELSHIYSLRDAAIAQMKVCERYNIKKKVSPRSQNITKNEKLAIKQLRENN 398
           K + +  D  +      + +  +AQ    ER N  + +      I  N KL+        
Sbjct: 272 KVIAIQSDVWDAHR--KINEILLAQ----ERLN--EAIIGCQLVIKINPKLS-------- 315

Query: 399 DIIIRPADKGGKTVVMDKADYTQKMTSILNSNDYEIIPGDPTKTIEESEKYGNLENESGQ 458
                P    G     +KA       +I+    +  I  D        EK G+   E G 
Sbjct: 316 ----WPYKIMGNIYTQNKA----WDKAIVAYRCFLEIESDKDWV---YEKLGDALKEKGL 364

Query: 459 KHAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHV 518
                   +A     +A +++PN    YY  G+  C   +YEEA+    + I ++PN + 
Sbjct: 365 ------IDEAIYSYQKAIEINPNNYWFYYSLGKALCKLSRYEEAITAYQRGIKIDPNLYF 418

Query: 519 A 519
           A
Sbjct: 419 A 419



 Score = 51.2 bits (121), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 95/478 (19%), Positives = 193/478 (40%), Gaps = 37/478 (7%)

Query: 70  RAFEHEDYLTAIRHCTEEIESTSSNHTKALARLLRATVYIFTSQSTKAIEDLTQLVEDTS 129
           + ++  D +   R C E+  S  +++ +A   L +    +   +  +AI    + +   +
Sbjct: 117 KIWQELDKVELARDCQEQALSLEAHYPQASKYLKQGKKLLENGEREEAIAYFQKAI---N 173

Query: 130 VDPKIKVNAHIKRAVVHLHAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEE 189
            +P + V+A+     + L    DF +A     +A ++ P++   +Y+ G+++   G+ + 
Sbjct: 174 FNPSL-VDAYQNLGDISL-KTKDFNEAINYYQKAIELKPDLWIVHYKLGKLFQEIGELDT 231

Query: 190 ALRNLDKTIALNPNFHVARAQRHFVVHKMIVPGDRERVEQSLKEFRNFVDTHSNVVEACT 249
           A    +  I LNP+F  +      ++H       ++ ++ +   ++  +   S+V +A  
Sbjct: 232 ATIEFNLAIELNPSFIYSYKNLGDILH------HKKDLDVAKNCYKKVIAIQSDVWDAHR 285

Query: 250 LFAQVLVDQEDFDGAEEYFNRSIRVDPENASLYVHRAMLMLQARGNVDEAIKLIEKAISI 309
              ++L+ QE  + A       I+++P+ +  Y     +  Q +   D+AI      + I
Sbjct: 286 KINEILLAQERLNEAIIGCQLVIKINPKLSWPYKIMGNIYTQNKA-WDKAIVAYRCFLEI 344

Query: 310 DKSCMFAYETLGTIEVQRGRLEEAVKCFNKALPLARDEAELSHIYSLRDAAIAQMKVCE- 368
           +    + YE LG    ++G ++EA+  + KA+ +  +       YSL  A     +  E 
Sbjct: 345 ESDKDWVYEKLGDALKEKGLIDEAIYSYQKAIEINPNNYWFY--YSLGKALCKLSRYEEA 402

Query: 369 --RYNIKKKVSPRSQNITKNEKLAIKQLRENNDII--------IRPADKGGKTVVMDKAD 418
              Y    K+ P       N  +A+ +L+  N  I        I+P        + +   
Sbjct: 403 ITAYQRGIKIDPNLYFAYHNLGVALVELKRWNQAIVAYRQAIKIKPDSYWSHYNLGEIFL 462

Query: 419 YTQKMTSILNSNDYEI--IPGDPTKTIEESEKYGNLENESGQKHAASDFTKAFADLDEAE 476
             Q+    + +  Y I   P  P       +  G +  + G+        +A A   +A 
Sbjct: 463 KLQEWDKAVETYRYAIENNPNSPWYY----QYLGIVLRKQGK------IQEAIACYRKAI 512

Query: 477 KVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQRHFVWTSTLAEL 534
           ++ P+    Y   G I    G  EEA+    K I L PN   A  Q   ++   LA+L
Sbjct: 513 EIKPDWHRFYSLLGDILLEIGDSEEAISCYIKAIKLQPNATAAYRQLRGIYIFKLAQL 570



 Score = 48.1 bits (113), Expect = 0.011,   Method: Compositional matrix adjust.
 Identities = 46/228 (20%), Positives = 102/228 (44%), Gaps = 15/228 (6%)

Query: 119 EDLTQLVEDTSVDPKIKVNAH-IKRAVVHLHAASDFTKAFADLDEAEKVDPNVADSYYQR 177
           E +T       +DP +    H +  A+V L     + +A     +A K+ P+   S+Y  
Sbjct: 401 EAITAYQRGIKIDPNLYFAYHNLGVALVEL---KRWNQAIVAYRQAIKIKPDSYWSHYNL 457

Query: 178 GQIYCLFGQYEEALRNLDKTIALNPNFHVARAQRHFVVHKMIVPGDRERVEQSLKEFRNF 237
           G+I+    ++++A+      I  NPN         +  +  IV   + ++++++  +R  
Sbjct: 458 GEIFLKLQEWDKAVETYRYAIENNPN------SPWYYQYLGIVLRKQGKIQEAIACYRKA 511

Query: 238 VDTHSNVVEACTLFAQVLVDQEDFDGAEEYFNRSIRVDPENASLYVH-RAMLML---QAR 293
           ++   +     +L   +L++  D + A   + ++I++ P   + Y   R + +    Q R
Sbjct: 512 IEIKPDWHRFYSLLGDILLEIGDSEEAISCYIKAIKLQPNATAAYRQLRGIYIFKLAQLR 571

Query: 294 GN-VDEAIKLIEKAISIDKSCMFAYETLGTIEVQRGRLEEAVKCFNKA 340
            + ++E +K  ++AI +  +    Y  L  I   +G L+ A+  + KA
Sbjct: 572 PHQLNELVKCYQEAIKLQPNFPEVYINLADILTGKGELDTAINYYQKA 619


>gi|298246522|ref|ZP_06970328.1| serine/threonine protein kinase with TPR repeats [Ktedonobacter
           racemifer DSM 44963]
 gi|297554003|gb|EFH87868.1| serine/threonine protein kinase with TPR repeats [Ktedonobacter
           racemifer DSM 44963]
          Length = 747

 Score = 73.9 bits (180), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 106/486 (21%), Positives = 197/486 (40%), Gaps = 73/486 (15%)

Query: 60  HELDLL-------SKAKRAFEHEDYLTAIRHCTEEIESTSSNHTKALARLLRATVYI--F 110
           HEL+ L       S  KR    ++ L  +RH  ++  S + +   A      +T Y   F
Sbjct: 271 HELEALLIRMLDMSAEKRPASAQEVLDVLRHVDQQRISGTLSQPIASMSGPTSTPYASGF 330

Query: 111 TSQSTKAIEDLTQLVEDTSVDPKIKVNAHIKRAVVHLHAASDFTKAFADLDEAEKVDPNV 170
            S  T +  + +QL++D                    +A     +A    D+  + D   
Sbjct: 331 ASTMTASSPETSQLLQDAYT----------------FYAQRRVPEALKLYDQVIRTDSLN 374

Query: 171 ADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQRHFVVHKMIVPGDRERVEQS 230
           A ++  RG    L GQ+ EAL++  + + L+P+   +   +   ++++       +   +
Sbjct: 375 AQAWQGRGLTQALNGQHREALQSFTRALQLDPDLVTSLNGKGVALNRL------RQNRDA 428

Query: 231 LKEF-RNFVDTHSNVV----EACTLFAQVLVDQEDFDGAEEYFNRSIRVDPENASLYVHR 285
           L+ F R  +    N V    +   L A  L +Q     A   F+ ++  DP  A  + ++
Sbjct: 429 LQSFDRAILLEPGNAVAWNGKGAALSALGLPEQ-----ALNAFDTALSFDPRMALAWSNK 483

Query: 286 AMLMLQARGNVDEAIKLIEKAISIDKSCMFAYETLGTIEVQRGRLEEAVKCFNKALPLAR 345
           ++++ Q R   +EA++  E+A+S + +    + + G I ++ GRL EA + + +AL   R
Sbjct: 484 SLILRQMR-KYEEALQASEQALSYEPNSALNWNSKGLILLEMGRLREAYQAYQEAL--KR 540

Query: 346 DEAELSHIYSLRDAAIAQMK---VCERYNIKKKVSPRSQNITKNEKLAIKQLRENN---- 398
           D      +Y + +   AQ K     + Y+   +  P    + +     +++L        
Sbjct: 541 DSRFAPALYGMGNVLYAQQKFKSALDNYDRALQFDPNYVKVWERRGQLLQELGNYRRSLE 600

Query: 399 --------DIIIRPADKGGKTVVMDKADYTQKMTSILNSNDYE-IIPGDPTKTIEESEKY 449
                   D    PA  G  TV+     Y   +      N YE  +  +P+     + K 
Sbjct: 601 SFERATQIDPSFAPAWLGKATVLSRMERYDMAL------NAYEEALRRNPSLPAALNGK- 653

Query: 450 GNLENESGQKHAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKT 509
           GN     G      +++ A +  D A KV+P +  + + +  I  L G+Y EAL   +  
Sbjct: 654 GNALYRLG------NYSAALSAYDNALKVNPRMVSALHNKSLILKLLGRYNEALAAAESA 707

Query: 510 IALNPN 515
           I L PN
Sbjct: 708 IRLAPN 713



 Score = 45.8 bits (107), Expect = 0.058,   Method: Compositional matrix adjust.
 Identities = 59/296 (19%), Positives = 122/296 (41%), Gaps = 35/296 (11%)

Query: 239 DTHSNVVEACTLFAQVLVDQEDFDGAEEYFNRSIRVDPENASLYVHRAMLMLQARGNVDE 298
           +T   + +A T +AQ  V +     A + +++ IR D  NA  +  R  L     G   E
Sbjct: 340 ETSQLLQDAYTFYAQRRVPE-----ALKLYDQVIRTDSLNAQAWQGRG-LTQALNGQHRE 393

Query: 299 AIKLIEKAISIDKSCMFAYETLGTIEVQRGRLEEAVKCFNKALPLARDEAELSHIYSLRD 358
           A++   +A+ +D   + +    G    +  +  +A++ F++A+ L   E   +  ++ + 
Sbjct: 394 ALQSFTRALQLDPDLVTSLNGKGVALNRLRQNRDALQSFDRAILL---EPGNAVAWNGKG 450

Query: 359 AAIAQMKVCER----YNIKKKVSPRSQNITKNEKLAIKQLRENNDIIIRPADKGGKTVVM 414
           AA++ + + E+    ++      PR      N+ L ++Q+R+  +            +  
Sbjct: 451 AALSALGLPEQALNAFDTALSFDPRMALAWSNKSLILRQMRKYEE-----------ALQA 499

Query: 415 DKADYTQKMTSILNSNDYEIIPGDPTKTIEESEKYGN-----------LENESGQKHAAS 463
            +   + +  S LN N   +I  +  +  E  + Y             L       +A  
Sbjct: 500 SEQALSYEPNSALNWNSKGLILLEMGRLREAYQAYQEALKRDSRFAPALYGMGNVLYAQQ 559

Query: 464 DFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVA 519
            F  A  + D A + DPN    + +RGQ+    G Y  +L + ++   ++P+F  A
Sbjct: 560 KFKSALDNYDRALQFDPNYVKVWERRGQLLQELGNYRRSLESFERATQIDPSFAPA 615


>gi|384210358|ref|YP_005596078.1| hypothetical protein Bint_2904 [Brachyspira intermedia PWS/A]
 gi|343388008|gb|AEM23498.1| TPR domain-containing protein [Brachyspira intermedia PWS/A]
          Length = 596

 Score = 73.9 bits (180), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 71/264 (26%), Positives = 121/264 (45%), Gaps = 21/264 (7%)

Query: 153 FTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQRH 212
           + +A  D D+A +++PN + +YY RG       QY+EA+++ DK+I L+PN       R 
Sbjct: 344 YKEAIKDFDKAIELNPNSSKTYYNRGNTKYSLEQYKEAIKDFDKSIELDPNNQDTYNNRG 403

Query: 213 FVVHKMIVPGDRERVEQSLKEFRNFVDTHSNVVEACTLFAQVLVDQEDFDGAEEYFNRSI 272
                 IV  D    ++++++F   ++   N  EA        +D    + A + FN++I
Sbjct: 404 ------IVKADLNYYKEAIEDFNKSIELDPNCSEAYNNRGTTKLDLGFNEKAIKDFNKAI 457

Query: 273 RVDPENASLYVHRAMLMLQARGNVDEAIKLIEKAISIDKSCMFAYETLGTIEVQRGRLEE 332
            ++P N+S Y +R        G   +A K   KAI ++ +   AY   G  +    + +E
Sbjct: 458 ELNPNNSSAYNNRGNAK-NKLGLYKKATKDFNKAIKLNPNNGNAYNNRGNAKNYLKKYKE 516

Query: 333 AVKCFNKALPLARDE------AELSHIY-SLRDAAIAQMKVCERYNIKKKVSPRSQNITK 385
           A+K FNKA+ L  ++        +S  Y  L D A       + YN+    S +      
Sbjct: 517 AIKDFNKAIELNYNQFIAYYNKGISKSYLGLNDEAYNDF--IKGYNLADDTSKKEY---- 570

Query: 386 NEKLAIKQLRENNDIIIRPADKGG 409
            E+  I   + NN+  I+  DK G
Sbjct: 571 -EQRIIDLAKHNNEAAIKICDKKG 593



 Score = 55.1 bits (131), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 56/233 (24%), Positives = 98/233 (42%), Gaps = 25/233 (10%)

Query: 148 HAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVA 207
           ++   + +A  D D++ ++DPN  D+Y  RG +      Y+EA+ + +K+I L+PN   A
Sbjct: 373 YSLEQYKEAIKDFDKSIELDPNNQDTYNNRGIVKADLNYYKEAIEDFNKSIELDPNCSEA 432

Query: 208 RAQRHFVVHKMIVPGDRERVEQSLKEFRNFVDTHSNVVEACTLFAQVLVDQEDFDGAEEY 267
              R           D    E+++K+F   ++ + N   A             +  A + 
Sbjct: 433 YNNRG------TTKLDLGFNEKAIKDFNKAIELNPNNSSAYNNRGNAKNKLGLYKKATKD 486

Query: 268 FNRSIRVDPENASLYVHRAMLMLQARGNV-------DEAIKLIEKAISIDKSCMFAYETL 320
           FN++I++                  RGN         EAIK   KAI ++ +   AY   
Sbjct: 487 FNKAIKL--------NPNNGNAYNNRGNAKNYLKKYKEAIKDFNKAIELNYNQFIAYYNK 538

Query: 321 GTIEVQRGRLEEAVKCFNKALPLARDEAELSHIYSLRDAAI----AQMKVCER 369
           G  +   G  +EA   F K   LA D ++  +   + D A     A +K+C++
Sbjct: 539 GISKSYLGLNDEAYNDFIKGYNLADDTSKKEYEQRIIDLAKHNNEAAIKICDK 591



 Score = 50.8 bits (120), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 29/91 (31%), Positives = 45/91 (49%), Gaps = 5/91 (5%)

Query: 441 KTIEESEKYGN-----LENESGQKHAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCL 495
           K  EE  +Y N       N    K+    + +A  D D+A +++PN + +YY RG     
Sbjct: 315 KNSEEYSQYQNNYYIAYNNRGNAKYNLEQYKEAIKDFDKAIELNPNSSKTYYNRGNTKYS 374

Query: 496 FGQYEEALRNLDKTIALNPNFHVARAQRHFV 526
             QY+EA+++ DK+I L+PN       R  V
Sbjct: 375 LEQYKEAIKDFDKSIELDPNNQDTYNNRGIV 405



 Score = 45.8 bits (107), Expect = 0.054,   Method: Compositional matrix adjust.
 Identities = 22/70 (31%), Positives = 38/70 (54%)

Query: 454 NESGQKHAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALN 513
           N    K++   + +A  D D++ ++DPN  D+Y  RG +      Y+EA+ + +K+I L+
Sbjct: 367 NRGNTKYSLEQYKEAIKDFDKSIELDPNNQDTYNNRGIVKADLNYYKEAIEDFNKSIELD 426

Query: 514 PNFHVARAQR 523
           PN   A   R
Sbjct: 427 PNCSEAYNNR 436


>gi|401837562|gb|EJT41476.1| TOM70-like protein [Saccharomyces kudriavzevii IFO 1802]
          Length = 617

 Score = 73.9 bits (180), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 65/240 (27%), Positives = 117/240 (48%), Gaps = 15/240 (6%)

Query: 135 KVNAHIKRAVVHLHAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNL 194
           +VN++I  A++ +   +D T+ +   D+A K++PN +  YY RGQ+  +   Y++A ++ 
Sbjct: 362 RVNSYIYMALI-MADRNDSTEYYNYFDKALKLNPNNSSVYYHRGQMNFILQNYDQAGKDF 420

Query: 195 DKTIALNPNFHVARAQRHFVVHKMIVPGDRERVEQSLKEFRNFVDTHSNVVEACTLFAQV 254
           DK   L+P       Q   + ++     D E +    K  R F +      E    FA++
Sbjct: 421 DKAKELDPENIFPYIQLACLAYRENKFDDCETLFSEAK--RKFPEAP----EVPNFFAEI 474

Query: 255 LVDQEDFDGAEEYFNRSIRVDPENASLYVHRAMLMLQAR--------GNVDEAIKLIEKA 306
           L D+ DFD A + ++ +I ++ +   +YV  A L+ +A          N  EA  L+EKA
Sbjct: 475 LTDKNDFDKALKQYDLAIELENKLDRIYVGIAPLVGKATLLTRNPTVENFVEATNLLEKA 534

Query: 307 ISIDKSCMFAYETLGTIEVQRGRLEEAVKCFNKALPLARDEAELSHIYSLRDAAIAQMKV 366
             +D     A   L  +++Q+  ++EA+  F ++  LAR   E     +  +AA  Q K+
Sbjct: 535 SKLDPRSEQAKIGLAQMKLQQEDIDEAIMLFEESADLARTMEEKLQAITFAEAAKVQQKI 594



 Score = 39.3 bits (90), Expect = 5.6,   Method: Compositional matrix adjust.
 Identities = 18/52 (34%), Positives = 32/52 (61%)

Query: 463 SDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNP 514
           +D T+ +   D+A K++PN +  YY RGQ+  +   Y++A ++ DK   L+P
Sbjct: 377 NDSTEYYNYFDKALKLNPNNSSVYYHRGQMNFILQNYDQAGKDFDKAKELDP 428


>gi|353241408|emb|CCA73225.1| probable mitochondrial precursor protein import receptor tom70
           [Piriformospora indica DSM 11827]
          Length = 607

 Score = 73.9 bits (180), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 62/260 (23%), Positives = 123/260 (47%), Gaps = 27/260 (10%)

Query: 123 QLVEDTSVDPKIKVNAHIKRAVVHLHAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYC 182
           Q  +   ++PK  ++  +K A +HL   ++  ++    ++A + +    D YY RGQIY 
Sbjct: 355 QFTKALELNPK-SIHTWLKMANIHLDQ-NNLEESMLCFEKALEHNSKDPDIYYHRGQIYF 412

Query: 183 LFGQYEEALRNLDKTIALNPNF---HVARAQRHFVVHKMIVPGDRERVEQSLKEFRNFVD 239
           +  ++ +A  +   +  L+  F   H+  A  H+             +++S+ EFR  + 
Sbjct: 413 VMNEFVKAAEDYATSTELDKTFVFSHIQLAVAHY---------KSGSIQKSMAEFRRIMK 463

Query: 240 THSNVVEACTLFAQVLVDQEDFDGAEEYFNRSIRVD-----PENASLYVHRAMLMLQARG 294
                 E    + +VL+DQE +  A E F ++I ++     P N    V++++ + Q + 
Sbjct: 464 EFPKHSEPPNYYGEVLLDQERYSDAIEKFEKAIELEKSKGPPMNVLPLVNKSLALFQWKK 523

Query: 295 NVDEAIKLIEKAISIDKSCMFAYETLGTIEVQRGRLEEAVKCFNKALPLARDEAELS--- 351
           +   A K   +A+ ID  C  A+ TLG I + + + ++A+  F +   ++ +  +LS   
Sbjct: 524 DGATAEKFCLEALEIDPLCEAAFATLGQIYLAQQQFDKALTKFRELTQISSNAPQLSLTF 583

Query: 352 -HIYSLRDAAIAQMKVCERY 370
            HIYS      AQ++  + Y
Sbjct: 584 YHIYSTE----AQVQFIKNY 599


>gi|428297688|ref|YP_007135994.1| hypothetical protein Cal6303_0957 [Calothrix sp. PCC 6303]
 gi|428234232|gb|AFZ00022.1| Tetratricopeptide TPR_1 repeat-containing protein [Calothrix sp.
           PCC 6303]
          Length = 331

 Score = 73.9 bits (180), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 72/303 (23%), Positives = 138/303 (45%), Gaps = 20/303 (6%)

Query: 63  DLLSKAKRAFEHEDYLTAIRHCTEEIESTSSNHTKALARLLRATVYIFTSQSTKAIEDLT 122
           D L K    +E +D+  A+   +E I+    N+  A     R            A+ D  
Sbjct: 17  DFLIKGNEKYEKKDFRGALADYSEAIK-LDPNYANAYGN--RGATRKELGDKQGALADYN 73

Query: 123 QLVEDTSVDPKIKVNAHIKRAVVHLHAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYC 182
           Q ++   ++P    NA+  R         D   A AD ++A K++PN A +Y +RG    
Sbjct: 74  QAIK---INPNY-ANAYGNRGATR-DELGDKQGALADYNQAIKINPNDAIAYNRRGYFRY 128

Query: 183 LFGQYEEALRNLDKTIALNPNFHVARAQRHFVVHKMIVPGDRER----VEQSLKEFRNFV 238
             G  + A+ +L++ I +NPN+  A   R +V +++   GD++     + Q+L ++   +
Sbjct: 129 ELGDKQGAIADLNQAIIINPNYADAYNSRGYVRYEL---GDKQGAIDDLNQALADYNQAI 185

Query: 239 DTHSNVVEACTLFAQVLVDQEDFDGAEEYFNRSIRVDPENASLYVHRAMLMLQARGNVDE 298
             + N  +  +          D  GA +  N++I+++P+     +   ++  +  G+ + 
Sbjct: 186 KINPNDAQVYSGRGYARYRLGDKQGAIDDLNQAIKINPKYRDAIIFIGLIKYE-DGDRET 244

Query: 299 AIKLIEKAISIDKSCMFAYETLGTIEVQRGRLEEAVKCFNKALPLAR---DEAEL-SHIY 354
           AIK  ++AI+ID         L T   ++G+ ++AV    +AL L +   DEA L   ++
Sbjct: 245 AIKQWQEAITIDPKSAEPLLALSTALHKKGQRQQAVNMAKQALTLDKSFADEAFLKKKLW 304

Query: 355 SLR 357
            +R
Sbjct: 305 GVR 307



 Score = 48.5 bits (114), Expect = 0.008,   Method: Compositional matrix adjust.
 Identities = 25/69 (36%), Positives = 37/69 (53%)

Query: 455 ESGQKHAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNP 514
           +  +K+   DF  A AD  EA K+DPN A++Y  RG      G  + AL + ++ I +NP
Sbjct: 21  KGNEKYEKKDFRGALADYSEAIKLDPNYANAYGNRGATRKELGDKQGALADYNQAIKINP 80

Query: 515 NFHVARAQR 523
           N+  A   R
Sbjct: 81  NYANAYGNR 89



 Score = 43.1 bits (100), Expect = 0.34,   Method: Compositional matrix adjust.
 Identities = 27/90 (30%), Positives = 45/90 (50%), Gaps = 1/90 (1%)

Query: 438 DPTKTIEESEKYGN-LENESGQKHAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLF 496
           D  + I+ +  Y N   N    +    D   A AD ++A K++PN A +Y +RG      
Sbjct: 71  DYNQAIKINPNYANAYGNRGATRDELGDKQGALADYNQAIKINPNDAIAYNRRGYFRYEL 130

Query: 497 GQYEEALRNLDKTIALNPNFHVARAQRHFV 526
           G  + A+ +L++ I +NPN+  A   R +V
Sbjct: 131 GDKQGAIADLNQAIIINPNYADAYNSRGYV 160



 Score = 42.7 bits (99), Expect = 0.45,   Method: Compositional matrix adjust.
 Identities = 26/89 (29%), Positives = 44/89 (49%), Gaps = 1/89 (1%)

Query: 438 DPTKTIEESEKYGN-LENESGQKHAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLF 496
           D ++ I+    Y N   N    +    D   A AD ++A K++PN A++Y  RG      
Sbjct: 37  DYSEAIKLDPNYANAYGNRGATRKELGDKQGALADYNQAIKINPNYANAYGNRGATRDEL 96

Query: 497 GQYEEALRNLDKTIALNPNFHVARAQRHF 525
           G  + AL + ++ I +NPN  +A  +R +
Sbjct: 97  GDKQGALADYNQAIKINPNDAIAYNRRGY 125



 Score = 41.2 bits (95), Expect = 1.4,   Method: Compositional matrix adjust.
 Identities = 24/71 (33%), Positives = 37/71 (52%), Gaps = 1/71 (1%)

Query: 450 GNLENESGQKHAA-SDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDK 508
           G +  E G K  A  D  +A AD ++A K++PN A  Y  RG      G  + A+ +L++
Sbjct: 158 GYVRYELGDKQGAIDDLNQALADYNQAIKINPNDAQVYSGRGYARYRLGDKQGAIDDLNQ 217

Query: 509 TIALNPNFHVA 519
            I +NP +  A
Sbjct: 218 AIKINPKYRDA 228


>gi|88602287|ref|YP_502465.1| hypothetical protein Mhun_0996 [Methanospirillum hungatei JF-1]
 gi|88187749|gb|ABD40746.1| TPR repeat [Methanospirillum hungatei JF-1]
          Length = 634

 Score = 73.9 bits (180), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 64/232 (27%), Positives = 107/232 (46%), Gaps = 12/232 (5%)

Query: 115 TKAIEDLTQLVEDTSVDPKIKVNAHIKRAVVHLHAASDFTKAFADLDEAEKVDPNVADSY 174
           T A+E  T   E    DP++ V AH  +  V++   SD + A A+   A +++PN+AD++
Sbjct: 299 TGAMEAFTAASE---ADPQMGV-AHYWKGQVYIDQ-SDRSGAIAEFRTATELNPNLADAW 353

Query: 175 YQRGQIYCLFGQYEEALRNLDKTIALNPNF---HVARAQRHFVVHKMIVPGDRERVEQSL 231
           Y  G +    G Y+EA   LDK I L P+    +  +    + +       D      +L
Sbjct: 354 YYLGGLLSDEGSYDEATTALDKMIELRPDLADPYYLKGLTQYQLENYQDAADSLEQATAL 413

Query: 232 KEFRNFVDTHSNVVEACTLFAQVLVDQEDFDGAEEYFNRSIRVDPENASLYVHRAMLMLQ 291
              +   D  S       L     V  ED  GA E F +++ ++  NA  +    +++ +
Sbjct: 414 NASQMTEDDRSKAYYTLGL---ARVQNEDNQGASEAFAKAVELNATNAVAWNDYGVVLNE 470

Query: 292 ARGNVDEAIKLIEKAISIDKSCMFAYETLGTIEVQRGRLEEAVKCFNKALPL 343
              N +EA+K   +AI I  S    Y   GT  V+  +L+EA+  F+KA+ +
Sbjct: 471 LE-NYEEALKAFNEAIKISDSEAEYYYNQGTTLVKLDKLDEAIAAFDKAVAI 521



 Score = 71.6 bits (174), Expect = 9e-10,   Method: Compositional matrix adjust.
 Identities = 87/367 (23%), Positives = 153/367 (41%), Gaps = 30/367 (8%)

Query: 152 DFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQR 211
           ++ +A ++  +A + DP    +Y + G  Y + G  E A+        LNP   VA    
Sbjct: 45  NYEEAISNFLKAVEEDPQNEQAYSKLGGSYLMTGDVESAIYAFQNVTNLNPENGVAWGNI 104

Query: 212 HFVVHKMIVPGDRERVEQSLKEFRNFVDTHSNVVEACTLFAQVLVDQEDFDGAEEYFNRS 271
            ++    +V  ++     +L+     V+  ++     T +    +   D + A E FN++
Sbjct: 105 GYL---YLVGKEKPDPVPALEALTKAVEVKTDDPGIWTNYGIAQLLNTDSESALESFNKA 161

Query: 272 IRVDPENASLYVHRAMLMLQARGNVDEAIKLIEKAISIDKSCMFAYETLGTIEVQRGRLE 331
           I + P+ +  Y  +  + L   G  +EA+   EKAI ++     A    G  E   G+ +
Sbjct: 162 IELMPDGSRAYYWKG-ITLSDLGQPEEALTAYEKAIELNPEFKDALYAKGIAESALGKFD 220

Query: 332 EAVKCFNKALPLARDEAE-LSHIYSLRDAAIAQMKVCERYNIKKKVSPRSQNITKNEKLA 390
           EA   FN+ L +  D +E    + S  D       V +R   K ++    +N       A
Sbjct: 221 EAEATFNQVLTIEGDYSEPFLTVGSDSD-------VWDR---KGRILFEVRNNPDEALTA 270

Query: 391 IKQLRENNDIIIRPADKGGKTVVMDKADYTQKMTSILNSNDYEIIPGDPTKTIEESEKYG 450
             +  E N          G+ V+ D+ D T  M +   +++      DP   +    K  
Sbjct: 271 FNKAVELNPYNANALYYKGR-VLYDQGDLTGAMEAFTAASE-----ADPQMGVAHYWK-- 322

Query: 451 NLENESGQKHA-ASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKT 509
                 GQ +   SD + A A+   A +++PN+AD++Y  G +    G Y+EA   LDK 
Sbjct: 323 ------GQVYIDQSDRSGAIAEFRTATELNPNLADAWYYLGGLLSDEGSYDEATTALDKM 376

Query: 510 IALNPNF 516
           I L P+ 
Sbjct: 377 IELRPDL 383



 Score = 63.9 bits (154), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 98/447 (21%), Positives = 173/447 (38%), Gaps = 90/447 (20%)

Query: 117 AIEDLTQLVEDTSVDPKIKVNAHIKRAVVHLHAASDFTKAFADLDEAEKVDPNVADSYYQ 176
           A+E LT+ VE  + DP I  N  I + +      +D   A    ++A ++ P+ + +YY 
Sbjct: 120 ALEALTKAVEVKTDDPGIWTNYGIAQLL-----NTDSESALESFNKAIELMPDGSRAYYW 174

Query: 177 RGQIYCLFGQYEEALRNLDKTIALNPNFH---VARAQRHFVVHK-----------MIVPG 222
           +G      GQ EEAL   +K I LNP F     A+      + K           + + G
Sbjct: 175 KGITLSDLGQPEEALTAYEKAIELNPEFKDALYAKGIAESALGKFDEAEATFNQVLTIEG 234

Query: 223 D-------------------------RERVEQSLKEFRNFVDTHSNVVEACTLFAQVLVD 257
           D                         R   +++L  F   V+ +     A     +VL D
Sbjct: 235 DYSEPFLTVGSDSDVWDRKGRILFEVRNNPDEALTAFNKAVELNPYNANALYYKGRVLYD 294

Query: 258 QEDFDGAEEYFNRSIRVDPENASLYVHRAMLMLQARGNVDEAIKLIEKAISIDKSCMFAY 317
           Q D  GA E F  +   DP+    +  +  + +  + +   AI     A  ++ +   A+
Sbjct: 295 QGDLTGAMEAFTAASEADPQMGVAHYWKGQVYID-QSDRSGAIAEFRTATELNPNLADAW 353

Query: 318 ETLGTIEVQRGRLEEAVKCFNKALPLARDEAELSHIYSLRDAAIAQMKVCERY-----NI 372
             LG +    G  +EA    +K + L  D   L+  Y L+     Q+   E Y     ++
Sbjct: 354 YYLGGLLSDEGSYDEATTALDKMIELRPD---LADPYYLKGLTQYQL---ENYQDAADSL 407

Query: 373 KKKVSPRSQNITKNEK----LAIKQLRENNDIIIRPADKGGKTVVMDKADYTQKMTSILN 428
           ++  +  +  +T++++      +   R  N+      D  G +    KA      T+ + 
Sbjct: 408 EQATALNASQMTEDDRSKAYYTLGLARVQNE------DNQGASEAFAKA-VELNATNAVA 460

Query: 429 SNDYEIIPGDPTKTIEESEKYGNLENESGQKHAASDFTKAFADLDEAEKVDPNVADSYYQ 488
            NDY ++       + E E Y              +  KAF   +EA K+  + A+ YY 
Sbjct: 461 WNDYGVV-------LNELENY-------------EEALKAF---NEAIKISDSEAEYYYN 497

Query: 489 RGQIYCLFGQYEEALRNLDKTIALNPN 515
           +G       + +EA+   DK +A+ P+
Sbjct: 498 QGTTLVKLDKLDEAIAAFDKAVAIEPS 524



 Score = 40.4 bits (93), Expect = 2.1,   Method: Compositional matrix adjust.
 Identities = 39/184 (21%), Positives = 74/184 (40%), Gaps = 42/184 (22%)

Query: 145 VHLHAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNF 204
           V L+   ++ +A    +EA K+  + A+ YY +G       + +EA+   DK +A+ P  
Sbjct: 466 VVLNELENYEEALKAFNEAIKISDSEAEYYYNQGTTLVKLDKLDEAIAAFDKAVAIEP-- 523

Query: 205 HVARAQRHFVVHKMIVPGDRERVEQSLKEFRNFVDTHSNVVEACTLFAQVLVDQEDFDGA 264
               + R ++   +                                    L+ QE+F+ A
Sbjct: 524 ----SPRAYLAKGL-----------------------------------ALITQENFEEA 544

Query: 265 EEYFNRSIRVDPENASLYVHRAMLMLQARGNVDEAIKLIEKAISIDKSCMFAYETLGTIE 324
            + F  +I +D   A L+  +A  + +    +DEA   ++KA+S D+   +A +    IE
Sbjct: 545 LKAFESAIALDDTKADLWAQKAFALYKLN-KMDEARAAVDKALSYDQEFKYALDLKELIE 603

Query: 325 VQRG 328
              G
Sbjct: 604 NPEG 607


>gi|428299078|ref|YP_007137384.1| hypothetical protein Cal6303_2406 [Calothrix sp. PCC 6303]
 gi|428235622|gb|AFZ01412.1| Tetratricopeptide TPR_1 repeat-containing protein [Calothrix sp.
           PCC 6303]
          Length = 584

 Score = 73.9 bits (180), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 54/208 (25%), Positives = 105/208 (50%), Gaps = 7/208 (3%)

Query: 138 AHIKRAVVHLHAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKT 197
           A+  RA+ +       +KA AD D    VDPN A ++  +G I     ++ EAL + D+ 
Sbjct: 237 AYSNRAIAY-RQQDQLSKAIADYDRLLAVDPNDAIAWTAQGLILEQLSRFTEALTSFDRA 295

Query: 198 IALNPNFHVARAQRHFVV--HKMIVPGDRERVEQSLKEFRNFVDTHSNVVEACTLFAQVL 255
           +A+NP + +   +R  ++  +KM  P  +   ++++K    + +      +A +  A  L
Sbjct: 296 VAINPKYSLGHVRRCTMLNRNKMYEPA-QAACDEAIKGDGQWGEI--GAAQAWSEMAHAL 352

Query: 256 VDQEDFDGAEEYFNRSIRVDPENASLYVHRAMLMLQARGNVDEAIKLIEKAISIDKSCMF 315
             Q+ ++ A    NR++ + P+ A  + +R++ + Q +    EA+  I+KAI +  +   
Sbjct: 353 SGQQQYEKAIAAANRAVGIKPDYAEAWSNRSVALWQLQ-QYPEALASIQKAIELKPNYAQ 411

Query: 316 AYETLGTIEVQRGRLEEAVKCFNKALPL 343
           AY   GTI   + + + A++ + KAL L
Sbjct: 412 AYFNQGTILATQKQYKTALQSYKKALIL 439



 Score = 53.5 bits (127), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 93/380 (24%), Positives = 157/380 (41%), Gaps = 61/380 (16%)

Query: 186 QYEEALRNLDKTIALNPNFHVARAQRHFVVHKMI-VPGDRERVEQSLKEFRNFVDTHSNV 244
           +YEEAL   ++ I L P   +  A    V+ KM   P      E++LK  +    T   +
Sbjct: 70  KYEEALTACEQAITLRPKNPILWADHSGVLLKMKKYPEAIASAERALKFDKK---TSLAL 126

Query: 245 VEACTLFAQVLVDQEDFDGAEEYFNRSIRVD-------PENASLYVHRAMLMLQARGNVD 297
              C  F+++  ++E  D      N++++VD       P+ A  ++HR ++ L   G +D
Sbjct: 127 TYQCMAFSELGRNEEGLDNC----NQALKVDGNWGKQSPKLA--WLHRGVI-LTNLGQLD 179

Query: 298 EAIKLIEKAISIDK--SCMFAY--ETLGTIEVQRGRLEEAVKCFNKALPLARDEAELSHI 353
           +A    ++ + ++   S   AY  E +  I    G+ E A+   N AL    D  E S  
Sbjct: 180 QAAIAYDRTLLLEPKDSLALAYRCELMNKI----GQPERAITNCNDALAGNGDWGEKSQT 235

Query: 354 YSLRDAAIA-----QM-KVCERYNIKKKVSPRSQNITKNEKLAIKQLRE--------NND 399
           ++  + AIA     Q+ K    Y+    V P        + L ++QL          +  
Sbjct: 236 FAYSNRAIAYRQQDQLSKAIADYDRLLAVDPNDAIAWTAQGLILEQLSRFTEALTSFDRA 295

Query: 400 IIIRPADKGGKTVVMDKADYTQKMTSILNSND-YEIIPGDPTKTIEESEKYGNL---ENE 455
           + I P    G            +  ++LN N  YE       + I+   ++G +   +  
Sbjct: 296 VAINPKYSLGHV----------RRCTMLNRNKMYEPAQAACDEAIKGDGQWGEIGAAQAW 345

Query: 456 SGQKHAASD---FTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIAL 512
           S   HA S    + KA A  + A  + P+ A+++  R        QY EAL ++ K I L
Sbjct: 346 SEMAHALSGQQQYEKAIAAANRAVGIKPDYAEAWSNRSVALWQLQQYPEALASIQKAIEL 405

Query: 513 NPNFHVARAQRHFVWTSTLA 532
            PN+    AQ +F   + LA
Sbjct: 406 KPNY----AQAYFNQGTILA 421



 Score = 50.1 bits (118), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 38/164 (23%), Positives = 75/164 (45%), Gaps = 12/164 (7%)

Query: 145 VHLHAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNF 204
           V L     + +A A + +A ++ PN A +Y+ +G I     QY+ AL++  K + L+P  
Sbjct: 384 VALWQLQQYPEALASIQKAIELKPNYAQAYFNQGTILATQKQYKTALQSYKKALILDPKN 443

Query: 205 HVARAQRHFVVHKMIVPGDRERVEQSLKEFRNFVDTHSNVVEACTLFAQVLVDQEDFDGA 264
               A    V+  +      ++ + +L    + +  + N  EA      VL        A
Sbjct: 444 PEGWANTSVVLWHL------KQYQSALTAADHAIAINRNSFEAWYNRGLVLTSLSRHKDA 497

Query: 265 EEYFNRSIRVDPENASLYVHRAMLML------QARGNVDEAIKL 302
            + +N +I+++P++A  +  R +++       QA   + EA+KL
Sbjct: 498 LKSYNSAIKINPKSADAFTGRGIILSKLKYYPQAIAALQEALKL 541


>gi|118387255|ref|XP_001026739.1| TPR Domain containing protein [Tetrahymena thermophila]
 gi|89308506|gb|EAS06494.1| TPR Domain containing protein [Tetrahymena thermophila SB210]
          Length = 1417

 Score = 73.9 bits (180), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 64/286 (22%), Positives = 129/286 (45%), Gaps = 16/286 (5%)

Query: 62  LDLLSKAKRAFEHEDYLTAIRHCTEEIESTSSNHTKALARLLRATVYIFTSQSTKAIEDL 121
           +D ++     +E +  L     C ++       + KA   L    VY       +AIE  
Sbjct: 417 VDAINNLGIVYEEKKMLDESMECYKKALQIDPLYVKAHYNL--GIVYELKKMHDQAIESY 474

Query: 122 TQLVEDTSVDPKIKVNAHIKRAVVHLHAASDFTKAFADLDEAEKVDPNVADSYYQRGQIY 181
            + +E   +DPK  +NA+ K   ++L     ++ A     +A ++DPN  ++Y   G +Y
Sbjct: 475 ERAIE---IDPKY-INAYNKLGNIYLDKKILYS-ALNYYKKALEIDPNYVNAYNNIGLVY 529

Query: 182 CLFGQYEEALRNLDKTIALNPNFHVARAQRHFVVHKMIVPGDRERVEQSLKEFRNFVDTH 241
                ++EAL + +K I +NP ++ A      V         + + E +++++   ++  
Sbjct: 530 YDKKMFDEALESYNKAIEINPKYNQAYYNSGLVYEL------KNQKETAIEKYEKAIELS 583

Query: 242 SNVVEACTLFAQVLVDQEDFDGAEEYFNRSIRVDPENASLY-VHRAMLMLQARGNVDEAI 300
              + A    A +  D + +    E F R + + P+  S+Y  +R   +     N DEA+
Sbjct: 584 PKYISALIRLADIYADSQQYQRGIECFKRILEITPD--SVYDNYRLGYIYYCLKNFDEAM 641

Query: 301 KLIEKAISIDKSCMFAYETLGTIEVQRGRLEEAVKCFNKALPLARD 346
              +KA+ I+ + + A   +G +   +   EEA+KC+ KA+ + ++
Sbjct: 642 YYYKKALEINPNYINAINNVGLVYYNQKNYEEALKCYEKAIEIDKN 687



 Score = 71.6 bits (174), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 96/435 (22%), Positives = 183/435 (42%), Gaps = 56/435 (12%)

Query: 130 VDPKIKVNAHIKRAVVHLHAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEE 189
           +DP   VNA+    +V+ +    F +A    ++A +++P    +YY  G +Y L  Q E 
Sbjct: 514 IDPNY-VNAYNNIGLVY-YDKKMFDEALESYNKAIEINPKYNQAYYNSGLVYELKNQKET 571

Query: 190 ALRNLDKTIALNPNFHVARAQRHFVVHKMIVPGDRERVEQSLKEFRNFVDTHSNVVEACT 249
           A+   +K I L+P +  A      ++    +  D ++ ++ ++ F+  ++   + V    
Sbjct: 572 AIEKYEKAIELSPKYISA------LIRLADIYADSQQYQRGIECFKRILEITPDSVYDNY 625

Query: 250 LFAQVLVDQEDFDGAEEYFNRSIRVDPENASLYVHRAMLMLQARGNVDEAIKLIEKAISI 309
               +    ++FD A  Y+ +++ ++P   +  ++   L+   + N +EA+K  EKAI I
Sbjct: 626 RLGYIYYCLKNFDEAMYYYKKALEINPNYINA-INNVGLVYYNQKNYEEALKCYEKAIEI 684

Query: 310 DKSCMFAYETLGTIEVQRGRLEEAVKCFNKAL--------PLARDEAELSHIYSLRDAAI 361
           DK+   A+   G +   +  ++EA+ C+ K +         L R        Y   +A  
Sbjct: 685 DKNYFQAHYNSGILYEAKKMIDEALDCYKKVMEINPNYFSALIRSGNIYLDKYMTDNALE 744

Query: 362 AQMKVCERYNIKKKVSPRSQNITKNEKLAI--KQL-RENNDIIIRPADKGGKTVVMDKAD 418
              K+ E       + P   +   N  +    KQ+  E  D  I+        V   KA 
Sbjct: 745 CFKKILE-------IDPNYIDAINNLGIVYEDKQMFDEAIDCYIKAIQINPNYV---KAH 794

Query: 419 YTQKMTSILNSNDYE----------IIPGDPTKTIEESEKYGNLENESGQKHAASDFTKA 468
           Y      +L  N ++          +I  DP K +    + GN+  +      A +F K 
Sbjct: 795 YN---LGVLYENKFKFDDALACFLKVIEIDP-KYMSAYNRAGNIYLDRQMNEKALEFYK- 849

Query: 469 FADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQRHFVWT 528
                +A ++DP   ++Y   G I+    + ++AL   DK + +NPN+  A+      + 
Sbjct: 850 -----KALEIDPTYVNAYNNIGLIFYNQRKLDDALEYYDKALQINPNYFQAQ------YN 898

Query: 529 STLAELMAFSDEFMI 543
           S L   + F +E  I
Sbjct: 899 SGLVYELKFQNELAI 913



 Score = 69.7 bits (169), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 110/468 (23%), Positives = 209/468 (44%), Gaps = 52/468 (11%)

Query: 79   TAIRHCTEEIESTSSNHTKALARLLRATVYIFTSQSTKAIEDLTQLVEDTSVDPKIKVNA 138
            TAI    + IE  S  +  AL RL  A +Y  + Q  + IE   +++E T   P   V  
Sbjct: 571  TAIEKYEKAIE-LSPKYISALIRL--ADIYADSQQYQRGIECFKRILEIT---PD-SVYD 623

Query: 139  HIKRAVVHLHAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTI 198
            + +   ++ +   +F +A     +A +++PN  ++    G +Y     YEEAL+  +K I
Sbjct: 624  NYRLGYIY-YCLKNFDEAMYYYKKALEINPNYINAINNVGLVYYNQKNYEEALKCYEKAI 682

Query: 199  ALNPNFHVARAQRHFVVHKMIVPGDRERVEQSLKEFRNFVDTHSNVVEACTLFAQVLVDQ 258
             ++ N+     Q H+  +  I+   ++ ++++L  ++  ++ + N   A      + +D+
Sbjct: 683  EIDKNYF----QAHY--NSGILYEAKKMIDEALDCYKKVMEINPNYFSALIRSGNIYLDK 736

Query: 259  EDFDGAEEYFNRSIRVDPENASLYVHRAMLMLQARGNVDEAIKLIEKAISIDKSCMFAYE 318
               D A E F + + +DP N    ++   ++ + +   DEAI    KAI I+ + + A+ 
Sbjct: 737  YMTDNALECFKKILEIDP-NYIDAINNLGIVYEDKQMFDEAIDCYIKAIQINPNYVKAHY 795

Query: 319  TLGTIEVQRGRLEEAVKCFNKALPL------ARDEAELSHIYSLRDAAIAQM--KVCERY 370
             LG +   + + ++A+ CF K + +      A + A   +IY  R     QM  K  E Y
Sbjct: 796  NLGVLYENKFKFDDALACFLKVIEIDPKYMSAYNRA--GNIYLDR-----QMNEKALEFY 848

Query: 371  NIKKKVSPRSQNITKNEKLAIKQLRENNDIIIRPADKGGKTVVMD----KADYTQKMTSI 426
                ++ P   N   N  L     R+ +D +    +   K + ++    +A Y   +   
Sbjct: 849  KKALEIDPTYVNAYNNIGLIFYNQRKLDDAL----EYYDKALQINPNYFQAQYNSGLVYE 904

Query: 427  LNSNDYEIIPGDPTKTIEESEKYGN----LEN---ESGQKHAASDFTKAFADLDEAEKVD 479
            L   + E+     T+ +E +  Y N    LEN   + G K    +  K      +AE+ +
Sbjct: 905  LKFQN-ELAILCYTRALEINPNYTNAQIRLENILLKDGIKQEELEVLKK-----KAEE-N 957

Query: 480  PNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQRHFVW 527
             N  + YY+ G +Y      +EA+  L+K I +NPN+  A  +   ++
Sbjct: 958  TNNPEDYYKLGYVYYTNFNMDEAISCLNKAIEINPNYSEAYDKLGLIY 1005



 Score = 68.9 bits (167), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 71/304 (23%), Positives = 140/304 (46%), Gaps = 29/304 (9%)

Query: 45   LSNGVELTNGDTNESHELDLLSKAKRAFEH--EDYLTAIRHCTEEIESTSSNHTKALARL 102
            L+  +E+    +    +L L+ + K+  E   E Y  AI     EI+S   N    L   
Sbjct: 984  LNKAIEINPNYSEAYDKLGLIYEEKKMDEKAIEYYKKAI-----EIDSKCFNAINGLG-- 1036

Query: 103  LRATVYIFTSQSTKAIEDLTQLVEDTSVDPKIKVNAHIKRAVVHLHAASDFTKAFADLDE 162
                +Y+    + +AI+     +E   +DPK  V  H    +       ++ +A     +
Sbjct: 1037 ---NIYLDQKLTAEAIKCYMAALE---LDPK-SVKTHYNLGI-SFEDERNYDQAVYHYKK 1088

Query: 163  AEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQRHFVVHKMIVPG 222
            A ++DP   ++Y   G IY + G+ ++AL    K + +NPN+  A      V +      
Sbjct: 1089 AVELDPRYINAYNNLGLIYEMKGKLDDALTCYQKALEINPNYVNAHNNVGLVYYA----- 1143

Query: 223  DRERVEQSLKEFRNFVDTHSNVVEACTLFAQVLVDQ---EDFDGAEEYFNRSIRVDPENA 279
             + ++E +L  +R  ++ + N  +A  L+   L+ +   +  D A  ++ R I + P+  
Sbjct: 1144 -QNKMEDALINYRKALELNPNYYQA--LYNSGLIYETYYKQIDQAIAFYKRVIELSPKYF 1200

Query: 280  SLYVHRAMLMLQARGNVDEAIKLIEKAISIDKSCMFAYETLGTIEVQRGRLEEAVKCFNK 339
            S Y+    + L ++  +DEA+   ++ + ID + + A   LG +  ++  L+EA+KC+ +
Sbjct: 1201 SAYIRLGNIYLDSKM-MDEALDCYQRILEIDPNYIDAINNLGIVYEEKEMLDEALKCYRR 1259

Query: 340  ALPL 343
            A+ L
Sbjct: 1260 AIEL 1263



 Score = 68.2 bits (165), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 109/480 (22%), Positives = 195/480 (40%), Gaps = 100/480 (20%)

Query: 80  AIRHCTEEIESTSSNHTKALARLLRATVYIFTSQSTKAIEDLTQLVEDTSVDPKIKVNAH 139
            I H  + +E    N+ KAL  L R   Y        AI+ L +++E   ++PK KV A+
Sbjct: 164 GIEHYKKMLE-IDPNNIKALINLSRN--YFCDLMHEDAIKCLNKVIE---IEPKNKV-AY 216

Query: 140 IKRAVVHLHAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIA 199
            +   ++    +   +A  +  +  ++DPN    Y   G +Y      EEA+  L K I 
Sbjct: 217 ERLGFIY-ENQNKIDEAIQNYQKVIELDPNFQSVYISLGFMYFTKNMDEEAIECLKKGIQ 275

Query: 200 LNPNFHVARAQRHFVVHKMIVPGDRERVEQSLKEFRNFVDTHS----------------- 242
           +NP F V   +R   V++M     +   E++ + ++  ++                    
Sbjct: 276 INPKF-VQAYERLGYVYQM-----KNMTEEAFEYYKKAIEIDPKYFEAQFNLGLLYYNLK 329

Query: 243 --NVVEACTLFAQVLVDQED----------------FDGAEEYFNRSIRVDPENASLYVH 284
             N  E C L A + +D  D                FD A   + ++I ++P+  + Y+ 
Sbjct: 330 MVNEAEVCYLNA-LQIDPLDIYTHYNLGLVYETKKMFDKALSCYQKAIELNPKYLNAYIR 388

Query: 285 RAMLMLQARGNVDEAIKLIEKAISIDKSCMFAYETLGTIEVQRGRLEEAVKCFNKAL--- 341
              + L+ +   D+AI+  +K + +D + + A   LG +  ++  L+E+++C+ KAL   
Sbjct: 389 SGNIYLETKKQ-DDAIQCYQKILELDPNYVDAINNLGIVYEEKKMLDESMECYKKALQID 447

Query: 342 PL-ARDEAELSHIYSLR---DAAIAQMKVCERYNIKKKVSPRSQNITKNEKLAIKQLREN 397
           PL  +    L  +Y L+   D AI      E Y    ++ P+                  
Sbjct: 448 PLYVKAHYNLGIVYELKKMHDQAI------ESYERAIEIDPKY----------------- 484

Query: 398 NDIIIRPADKGGKTVVMDKADYTQKMTSILNSNDYEIIPGDPTKTIEESEKYGNLENESG 457
               I   +K G  + +DK    + + S LN            K +E    Y N  N  G
Sbjct: 485 ----INAYNKLG-NIYLDK----KILYSALNY---------YKKALEIDPNYVNAYNNIG 526

Query: 458 QKHAASD-FTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNF 516
             +     F +A    ++A +++P    +YY  G +Y L  Q E A+   +K I L+P +
Sbjct: 527 LVYYDKKMFDEALESYNKAIEINPKYNQAYYNSGLVYELKNQKETAIEKYEKAIELSPKY 586



 Score = 63.5 bits (153), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 41/177 (23%), Positives = 89/177 (50%), Gaps = 7/177 (3%)

Query: 167  DPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQRHFVVHKMIVPGDRER 226
            + N  + YY+ G +Y      +EA+  L+K I +NPN+  A  +   +        +++ 
Sbjct: 957  NTNNPEDYYKLGYVYYTNFNMDEAISCLNKAIEINPNYSEAYDKLGLIYE------EKKM 1010

Query: 227  VEQSLKEFRNFVDTHSNVVEACTLFAQVLVDQEDFDGAEEYFNRSIRVDPENASLYVHRA 286
             E++++ ++  ++  S    A      + +DQ+    A + +  ++ +DP++   + +  
Sbjct: 1011 DEKAIEYYKKAIEIDSKCFNAINGLGNIYLDQKLTAEAIKCYMAALELDPKSVKTHYNLG 1070

Query: 287  MLMLQARGNVDEAIKLIEKAISIDKSCMFAYETLGTIEVQRGRLEEAVKCFNKALPL 343
            +     R N D+A+   +KA+ +D   + AY  LG I   +G+L++A+ C+ KAL +
Sbjct: 1071 ISFEDER-NYDQAVYHYKKAVELDPRYINAYNNLGLIYEMKGKLDDALTCYQKALEI 1126



 Score = 62.8 bits (151), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 56/239 (23%), Positives = 110/239 (46%), Gaps = 35/239 (14%)

Query: 136  VNAHIKRAVVHLHAASDFTKAFADLDEAEKVDPNVADSYYQRGQIY-CLFGQYEEALRNL 194
            VNAH    +V+ +A +    A  +  +A +++PN   + Y  G IY   + Q ++A+   
Sbjct: 1131 VNAHNNVGLVY-YAQNKMEDALINYRKALELNPNYYQALYNSGLIYETYYKQIDQAIAFY 1189

Query: 195  DKTIALNPNFHVA--RAQRHFVVHKM--------------------------IVPGDRER 226
             + I L+P +  A  R    ++  KM                          IV  ++E 
Sbjct: 1190 KRVIELSPKYFSAYIRLGNIYLDSKMMDEALDCYQRILEIDPNYIDAINNLGIVYEEKEM 1249

Query: 227  VEQSLKEFRNFVDTHSNVVEACTLFAQVLVDQEDFDGAEEYFNRSIRVDPE--NASLYVH 284
            ++++LK +R  ++ +    +A      +  DQ  FD A   +   I +DP+  NA   + 
Sbjct: 1250 LDEALKCYRRAIELNPKYTKAYYNMGIIYEDQNKFDDAINCYKTIIELDPKYINAINRLG 1309

Query: 285  RAMLMLQARGNVDEAIKLIEKAISIDKSCMFAYETLGTIEVQRGRLEEAVKCFNKALPL 343
               L LQ   N DEA+   +KA+ I+ + ++A+  LG +  ++ ++ +A++C+ K + +
Sbjct: 1310 NIYLDLQ---NDDEALACYQKALEINPNYLYAFYNLGLVYSEKKKIGKAIQCYQKVISI 1365



 Score = 62.0 bits (149), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 37/168 (22%), Positives = 90/168 (53%), Gaps = 7/168 (4%)

Query: 176 QRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQRHFVVHKMIVPGDRERVEQSLKEFR 235
           Q+G  +   G ++EA+   ++ + +N N   A     F   K      +++++Q+L+ ++
Sbjct: 14  QKGLEFQESGNFDEAVEYFNRVLNINLNHEDANYNLGFTYEK------QDKLDQALECYK 67

Query: 236 NFVDTHSNVVEACTLFAQVLVDQEDFDGAEEYFNRSIRVDPENASLYVHRAMLMLQARGN 295
             +  + + ++A    A+V  +Q++ D + ++  ++I +DP  A  Y  R   + + +  
Sbjct: 68  KVISINPSYIKAYVSIARVYFNQDNLDESIKFLEKAIEIDPNYAEAY-ERLGWVYENQNL 126

Query: 296 VDEAIKLIEKAISIDKSCMFAYETLGTIEVQRGRLEEAVKCFNKALPL 343
           +D+AI   +KAI ID + + ++ +LG +   +G+++E ++ + K L +
Sbjct: 127 IDQAIDSYKKAIEIDPNHLDSHYSLGVVYESQGKIDEGIEHYKKMLEI 174



 Score = 62.0 bits (149), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 42/216 (19%), Positives = 99/216 (45%), Gaps = 8/216 (3%)

Query: 128  TSVDPKIKVNAHIKRAVVHLHAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQY 187
              +DP+  +NA+    +++         A     +A +++PN  +++   G +Y    + 
Sbjct: 1090 VELDPRY-INAYNNLGLIY-EMKGKLDDALTCYQKALEINPNYVNAHNNVGLVYYAQNKM 1147

Query: 188  EEALRNLDKTIALNPNFHVARAQRHFVVHKMIVPGDRERVEQSLKEFRNFVDTHSNVVEA 247
            E+AL N  K + LNPN++ A      +          ++++Q++  ++  ++       A
Sbjct: 1148 EDALINYRKALELNPNYYQALYNSGLIYETY-----YKQIDQAIAFYKRVIELSPKYFSA 1202

Query: 248  CTLFAQVLVDQEDFDGAEEYFNRSIRVDPENASLYVHRAMLMLQARGNVDEAIKLIEKAI 307
                  + +D +  D A + + R + +DP N    ++   ++ + +  +DEA+K   +AI
Sbjct: 1203 YIRLGNIYLDSKMMDEALDCYQRILEIDP-NYIDAINNLGIVYEEKEMLDEALKCYRRAI 1261

Query: 308  SIDKSCMFAYETLGTIEVQRGRLEEAVKCFNKALPL 343
             ++     AY  +G I   + + ++A+ C+   + L
Sbjct: 1262 ELNPKYTKAYYNMGIIYEDQNKFDDAINCYKTIIEL 1297



 Score = 60.5 bits (145), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 63/278 (22%), Positives = 125/278 (44%), Gaps = 26/278 (9%)

Query: 72  FEHEDYLTAIRHCTEEIESTSSNHTKALARLLRATVYIFTSQSTKAIEDLTQLVEDTSVD 131
           +E +D L     C +++ S + ++ KA   + R  VY       ++I+ L + +E   +D
Sbjct: 53  YEKQDKLDQALECYKKVISINPSYIKAYVSIAR--VYFNQDNLDESIKFLEKAIE---ID 107

Query: 132 PKIKVNAHIKRAVVHLHAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEAL 191
           P     A+ +   V+    +   +A     +A ++DPN  DS+Y  G +Y   G+ +E +
Sbjct: 108 PNY-AEAYERLGWVY-ENQNLIDQAIDSYKKAIEIDPNHLDSHYSLGVVYESQGKIDEGI 165

Query: 192 RNLDKTIALNPN-----FHVARAQRHFVVHKMIVPGDRERVEQSLKEFRNFVDTHSNVVE 246
            +  K + ++PN      +++R     ++H           E ++K     ++       
Sbjct: 166 EHYKKMLEIDPNNIKALINLSRNYFCDLMH-----------EDAIKCLNKVIEIEPKNKV 214

Query: 247 ACTLFAQVLVDQEDFDGAEEYFNRSIRVDPENASLYVHRAMLMLQARGNVD-EAIKLIEK 305
           A      +  +Q   D A + + + I +DP   S+Y+    +      N+D EAI+ ++K
Sbjct: 215 AYERLGFIYENQNKIDEAIQNYQKVIELDPNFQSVYISLGFMYFTK--NMDEEAIECLKK 272

Query: 306 AISIDKSCMFAYETLGTIEVQRGRLEEAVKCFNKALPL 343
            I I+   + AYE LG +   +   EEA + + KA+ +
Sbjct: 273 GIQINPKFVQAYERLGYVYQMKNMTEEAFEYYKKAIEI 310



 Score = 57.8 bits (138), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 78/318 (24%), Positives = 133/318 (41%), Gaps = 40/318 (12%)

Query: 213 FVVHKMIVPGDRERVEQSLKEFRNFVDTHSNVVEACTLFAQVLVDQEDFDGAEEYFNRSI 272
           F++ K +   +    +++++ F   ++ + N  +A          Q+  D A E + + I
Sbjct: 11  FLLQKGLEFQESGNFDEAVEYFNRVLNINLNHEDANYNLGFTYEKQDKLDQALECYKKVI 70

Query: 273 RVDPENASLYVHRAMLMLQARGNVDEAIKLIEKAISIDKSCMFAYETLGTIEVQRGRLEE 332
            ++P     YV  A +    + N+DE+IK +EKAI ID +   AYE LG +   +  +++
Sbjct: 71  SINPSYIKAYVSIARVYFN-QDNLDESIKFLEKAIEIDPNYAEAYERLGWVYENQNLIDQ 129

Query: 333 AVKCFNKALPLARDEAELSHIYSLRDAAIAQMKVCERYNIKKKVSPRSQNITKNEKLAIK 392
           A+  + KA+ +  D   L   YSL     +Q K+ E     KK+     N  K    A+ 
Sbjct: 130 AIDSYKKAIEI--DPNHLDSHYSLGVVYESQGKIDEGIEHYKKMLEIDPNNIK----ALI 183

Query: 393 QLRENN--DIIIRPADKGGKTVVMDKADYTQKMTSILNSNDYEIIPGDPTKTIEESEKYG 450
            L  N   D++   A K    V+                   EI P +        E+ G
Sbjct: 184 NLSRNYFCDLMHEDAIKCLNKVI-------------------EIEPKNKVAY----ERLG 220

Query: 451 NL-ENESGQKHAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKT 509
            + EN++    A  ++ K         ++DPN    Y   G +Y      EEA+  L K 
Sbjct: 221 FIYENQNKIDEAIQNYQKVI-------ELDPNFQSVYISLGFMYFTKNMDEEAIECLKKG 273

Query: 510 IALNPNFHVARAQRHFVW 527
           I +NP F  A  +  +V+
Sbjct: 274 IQINPKFVQAYERLGYVY 291



 Score = 53.9 bits (128), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 59/271 (21%), Positives = 122/271 (45%), Gaps = 21/271 (7%)

Query: 75   EDYLTAIRHCTEEIESTSSNHTKAL--ARLLRATVYIFTSQSTKAIEDLTQLVEDTSVDP 132
            ED L   R   E     + N+ +AL  + L+  T Y    Q  +AI    +++E   + P
Sbjct: 1148 EDALINYRKALE----LNPNYYQALYNSGLIYETYY---KQIDQAIAFYKRVIE---LSP 1197

Query: 133  KIKVNAHIKRAVVHLHAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALR 192
            K   +A+I+   ++L +     +A        ++DPN  D+    G +Y      +EAL+
Sbjct: 1198 KY-FSAYIRLGNIYLDSKM-MDEALDCYQRILEIDPNYIDAINNLGIVYEEKEMLDEALK 1255

Query: 193  NLDKTIALNPNFHVARAQRHFVVHKMIVPGDRERVEQSLKEFRNFVDTHSNVVEACTLFA 252
               + I LNP +  A        +  I+  D+ + + ++  ++  ++     + A     
Sbjct: 1256 CYRRAIELNPKYTKA------YYNMGIIYEDQNKFDDAINCYKTIIELDPKYINAINRLG 1309

Query: 253  QVLVDQEDFDGAEEYFNRSIRVDPENASLYVHRAMLMLQARGNVDEAIKLIEKAISIDKS 312
             + +D ++ D A   + +++ ++P N     +   L+   +  + +AI+  +K ISID  
Sbjct: 1310 NIYLDLQNDDEALACYQKALEINP-NYLYAFYNLGLVYSEKKKIGKAIQCYQKVISIDPK 1368

Query: 313  CMFAYETLGTIEVQRGRLEEAVKCFNKALPL 343
             +  Y  LG I  ++ ++ +A+  + KAL +
Sbjct: 1369 YIDGYINLGVIFDEKKQMNKALTQYKKALKI 1399



 Score = 50.1 bits (118), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 56/252 (22%), Positives = 106/252 (42%), Gaps = 33/252 (13%)

Query: 121  LTQLVEDTSVDPKIKVNAHIKRAVVHLHAASDFTKAFADLDEAEKVDPNVADSYYQRGQI 180
            L   ++   +DPK  ++A+ +   ++L    +  KA     +A ++DP   ++Y   G I
Sbjct: 811  LACFLKVIEIDPKY-MSAYNRAGNIYLDRQMN-EKALEFYKKALEIDPTYVNAYNNIGLI 868

Query: 181  YCLFGQYEEALRNLDKTIALNPNFHVARAQRHFVVH------------------------ 216
            +    + ++AL   DK + +NPN+  A+     V                          
Sbjct: 869  FYNQRKLDDALEYYDKALQINPNYFQAQYNSGLVYELKFQNELAILCYTRALEINPNYTN 928

Query: 217  -----KMIVPGDRERVEQSLKEFRNFVDTHSNVVEACTLFAQVLVDQEDFDGAEEYFNRS 271
                 + I+  D  + E+ L+  +   + ++N  E       V     + D A    N++
Sbjct: 929  AQIRLENILLKDGIKQEE-LEVLKKKAEENTNNPEDYYKLGYVYYTNFNMDEAISCLNKA 987

Query: 272  IRVDPENASLYVHRAMLMLQARGNVDEAIKLIEKAISIDKSCMFAYETLGTIEVQRGRLE 331
            I ++P  +  Y  +  L+ + +   ++AI+  +KAI ID  C  A   LG I + +    
Sbjct: 988  IEINPNYSEAY-DKLGLIYEEKKMDEKAIEYYKKAIEIDSKCFNAINGLGNIYLDQKLTA 1046

Query: 332  EAVKCFNKALPL 343
            EA+KC+  AL L
Sbjct: 1047 EAIKCYMAALEL 1058


>gi|434405402|ref|YP_007148287.1| tetratricopeptide repeat protein [Cylindrospermum stagnale PCC
           7417]
 gi|428259657|gb|AFZ25607.1| tetratricopeptide repeat protein [Cylindrospermum stagnale PCC
           7417]
          Length = 662

 Score = 73.9 bits (180), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 96/440 (21%), Positives = 182/440 (41%), Gaps = 52/440 (11%)

Query: 118 IEDLTQLVED-TSVDPKIKVNA--HIKRAVVHLHAASDFTKAFADLDEAEKVDPNVADSY 174
           I++LT  +E+  S +P++   A  ++K+A   L     + +A A  D+A ++ P++  ++
Sbjct: 209 IQELTAQLENLKSANPQLFFTADDYVKQADA-LFFEERYEEAIASCDKAIELKPDMHKAW 267

Query: 175 YQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQRHFVVHKMIVPGDRERVEQSLKEF 234
             RG      G++EEA+ + DK + + P+FH A   R  V+      G+  R E+++  +
Sbjct: 268 SNRGVALGNLGRHEEAIASFDKALEIKPDFHEAWNNRGAVL------GNLGRNEEAITSY 321

Query: 235 RNFVDTHSNVVEACTLFAQVLVDQEDFDGAEEYFNRSIRVDPENASLYVHRAMLMLQARG 294
              ++   +  EA       LV     + A   +++++ + P+    + +R +  L   G
Sbjct: 322 DKAIEIKPDFHEAWYNLGNALVQLGQDEKAIASYDKALEIKPDFHQAWNNRGV-TLGKLG 380

Query: 295 NVDEAIKLIEKAISIDKSCMFAYETLGTIEVQRGRLEEAVKCFNKALPLARDEAELSHIY 354
             +EAI   +KA+ I      A+   G    + GR ++A+  F + + +  D  E    +
Sbjct: 381 QYEEAIASYDKALEIKPDYYEAWYNRGLALGELGRYQDAIASFKEVIRIKPDYCE---AW 437

Query: 355 SLRDAAIAQMKVCER----YNIKKKVSPRSQNITKNEKLAIKQLRENNDII--------I 402
             R   +  ++  E     ++   K+ P       N  LA+  L    D I        I
Sbjct: 438 FKRGVMLGNLERNENAIASFDEVIKIKPDYHEAWYNRGLALDNLGMYRDAIASYEQVLKI 497

Query: 403 RPADKGG----KTVVMDKADYTQKMTSI-----LNSNDYE---------IIPGDPTKTIE 444
           +P D          + +   Y  ++ S      +  NDYE         +  G   + I 
Sbjct: 498 KPDDHEAWYNRGLALGNIGRYEDEIASYHELLKIKPNDYEAWYNWGIALVNLGKNEEAIA 557

Query: 445 ESEKYGNLENESGQKH--------AASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLF 496
             +K  NL+ +  Q              +  A A  D+A ++ P +  ++Y +     L 
Sbjct: 558 YFDKVVNLKPDDYQTWYNRGLALGKLGRYENAIASYDKAVEIKPELQQAWYNKACYCALV 617

Query: 497 GQYEEALRNLDKTIALNPNF 516
              E AL NL + I LNP +
Sbjct: 618 QNLEPALENLQQAIKLNPQY 637



 Score = 65.9 bits (159), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 92/434 (21%), Positives = 166/434 (38%), Gaps = 101/434 (23%)

Query: 116 KAIEDLTQLVEDTSVDPKIKVNAHIKRAVVHLHAASDFTKAFADLDEAEKVDPNV---AD 172
           + +++L+ +V   S+ P + V   I++ +  L A          L+  +  +P +   AD
Sbjct: 182 RVLQELSLIVPQPSLTP-VSVEPEIQQKIQELTA---------QLENLKSANPQLFFTAD 231

Query: 173 SYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQRHFVVHKMIVPGDRERVEQSLK 232
            Y ++        +YEEA+ + DK I L P+ H A + R   +      G+  R E+++ 
Sbjct: 232 DYVKQADALFFEERYEEAIASCDKAIELKPDMHKAWSNRGVAL------GNLGRHEEAIA 285

Query: 233 EFRNFVDTHSNVVEACTLFAQVLVDQEDFDGAEEYFNRSIRVDPENASLYVHRAMLMLQA 292
            F                                  ++++ + P+    + +R   +L  
Sbjct: 286 SF----------------------------------DKALEIKPDFHEAWNNRGA-VLGN 310

Query: 293 RGNVDEAIKLIEKAISIDKSCMFAYETLGTIEVQRGRLEEAVKCFNKALPLARDEAELSH 352
            G  +EAI   +KAI I      A+  LG   VQ G+ E+A+  ++KAL +  D      
Sbjct: 311 LGRNEEAITSYDKAIEIKPDFHEAWYNLGNALVQLGQDEKAIASYDKALEIKPD---FHQ 367

Query: 353 IYSLRDAAIAQMKVCER----YNIKKKVSPRSQNITKNEKLAIKQLRENNDIIIRPADKG 408
            ++ R   + ++   E     Y+   ++ P       N  LA+ +L    D I       
Sbjct: 368 AWNNRGVTLGKLGQYEEAIASYDKALEIKPDYYEAWYNRGLALGELGRYQDAI-----AS 422

Query: 409 GKTVVMDKADYTQKMTSILNSNDYEIIPGDPTKTIEESEKYGNLE-NESGQKHAASDFTK 467
            K V+  K DY +                      +     GNLE NE+           
Sbjct: 423 FKEVIRIKPDYCEAW-------------------FKRGVMLGNLERNEN----------- 452

Query: 468 AFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQRHFVW 527
           A A  DE  K+ P+  +++Y RG      G Y +A+ + ++ + + P+ H A   R    
Sbjct: 453 AIASFDEVIKIKPDYHEAWYNRGLALDNLGMYRDAIASYEQVLKIKPDDHEAWYNRGL-- 510

Query: 528 TSTLAELMAFSDEF 541
              L  +  + DE 
Sbjct: 511 --ALGNIGRYEDEI 522


>gi|256422077|ref|YP_003122730.1| hypothetical protein Cpin_3056 [Chitinophaga pinensis DSM 2588]
 gi|256036985|gb|ACU60529.1| TPR repeat-containing protein [Chitinophaga pinensis DSM 2588]
          Length = 543

 Score = 73.6 bits (179), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 71/266 (26%), Positives = 115/266 (43%), Gaps = 15/266 (5%)

Query: 75  EDYLTAIRHCTEEIESTSSNHTKALARLLRATVYIFTSQSTKAIEDLTQLVEDTSVDPKI 134
           E Y   IR  T+ I     N     A   R  +Y   +++  AI D T  +   ++DP+ 
Sbjct: 289 EKYALTIRDYTKVITLFPGNSA---AFRDRGYLYAKLNKTDSAIADFTSAI---TLDPQS 342

Query: 135 KVNAHIKRAVVHLHAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNL 194
            + A   R  +++        A ADL  A K+DP+    YY RG  Y  +G YE A+ + 
Sbjct: 343 SL-ALGYRGALYIET-KQLESAIADLSAAIKIDPDALQHYYNRGLAYYQWGAYEPAIADF 400

Query: 195 DKTIALNPNFHVARAQRHFVVHKMIVPGDRERVEQSLKEFRNFVDTHSNVVEACTLFAQV 254
              I   P   VA   R  +   +  P        ++ +    +D      E+  +    
Sbjct: 401 TTLITKGPPNAVAYRYRGNLYTYVNKPA------LAIADISKAIDLAPKEAESYAVRGLA 454

Query: 255 LVDQEDFDGAEEYFNRSIRVDPENASLYVHRAMLMLQARGNVDEAIKLIEKAISIDKSCM 314
              Q D+  A + F+ SI++DP + ++YV+RA L  +   N   AIK   +AI +D + +
Sbjct: 455 YALQADYKQAVQDFSTSIKLDPGSKTIYVNRA-LAYKYLNNYKAAIKDYTQAIELDPNDV 513

Query: 315 FAYETLGTIEVQRGRLEEAVKCFNKA 340
             Y+  G +  Q G+ + A   F KA
Sbjct: 514 DVYKERGKVYEQMGKKDLAAADFKKA 539



 Score = 50.8 bits (120), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 89/367 (24%), Positives = 139/367 (37%), Gaps = 68/367 (18%)

Query: 188 EEALRNLDKTIALNPNFHVARAQRHFVVHKMIVPGDRERVEQSLKEFRNFVDTHSNVVEA 247
           + A   L+K + LN N+  A   R ++  K+ VP      E S  +F            A
Sbjct: 120 KNAFVALNKALDLNGNYAWAYCLRGYLYTKINVP------ELSFNDFS----------RA 163

Query: 248 CTLFAQVLVDQEDFDGAEEY---------FNRSIRVDPENASLYVHRAMLMLQARGNVDE 298
             L A+      D  GA+           + + I  DP++ S Y+ RA    ++R    +
Sbjct: 164 IALNAK----GGDLSGAQNAVSDKSVIRDYTKKIGKDPKDDSAYLQRAR-AYESREKNKQ 218

Query: 299 AIKLIEKAISIDKSCMFAYETLGTIEVQRGRLEEAVKCFNKALPLARDEAELSHIYSLRD 358
           A+K  +KAI++D     AY  L  + +Q        K   ++   A D ++ +  Y    
Sbjct: 219 AVKDYKKAIALDPDNTEAYYGLQNLYLQG-------KGPKQSSAPADDISDTTEQY---- 267

Query: 359 AAIAQMKVCERYNIKKKVSPRSQNITKNEKLAIKQLRENNDIIIRPADKGGKTVVMDKAD 418
             I +    E Y      +  +   T  EK A+        I + P   G      D+  
Sbjct: 268 --IEEQPFTEFY-----ATQGTTYSTLEEKYALTIRDYTKVITLFP---GNSAAFRDRG- 316

Query: 419 YTQKMTSILNSNDYEI------IPGDPTKTIEESEKYGNLENESGQKHAASDFTKAFADL 472
               + + LN  D  I      I  DP  ++    + G L  E+ Q         A ADL
Sbjct: 317 ---YLYAKLNKTDSAIADFTSAITLDPQSSLALGYR-GALYIETKQ------LESAIADL 366

Query: 473 DEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQRHFVWTSTLA 532
             A K+DP+    YY RG  Y  +G YE A+ +    I   P   VA   R  ++T    
Sbjct: 367 SAAIKIDPDALQHYYNRGLAYYQWGAYEPAIADFTTLITKGPPNAVAYRYRGNLYTYVNK 426

Query: 533 ELMAFSD 539
             +A +D
Sbjct: 427 PALAIAD 433



 Score = 49.3 bits (116), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 81/369 (21%), Positives = 144/369 (39%), Gaps = 45/369 (12%)

Query: 167 DPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQRHFVVHKMIVPGDRER 226
           DP    +Y QR + Y    + ++A+++  K IAL+P+      + ++ +  + + G   +
Sbjct: 196 DPKDDSAYLQRARAYESREKNKQAVKDYKKAIALDPD----NTEAYYGLQNLYLQGKGPK 251

Query: 227 VEQSLKEFRNFVDTHSNVVEACTLFAQVLVDQEDFDGAEEYFNRSIR-------VDPENA 279
             QS     +  DT    +E              +   EE +  +IR       + P N+
Sbjct: 252 --QSSAPADDISDTTEQYIEEQPFTEFYATQGTTYSTLEEKYALTIRDYTKVITLFPGNS 309

Query: 280 SLYVHRAMLMLQARGNVDEAIKLIEKAISIDKSCMFAYETLGTIEVQRGRLEEAVKCFNK 339
           + +  R  L  +     D AI     AI++D     A    G + ++  +LE A+   + 
Sbjct: 310 AAFRDRGYLYAKLN-KTDSAIADFTSAITLDPQSSLALGYRGALYIETKQLESAIADLSA 368

Query: 340 ALPLARDEAELSHIY---------SLRDAAIAQMKVCERYNIKKKVSPRSQN----ITKN 386
           A+ +  D   L H Y            + AIA             V+ R +         
Sbjct: 369 AIKI--DPDALQHYYNRGLAYYQWGAYEPAIADFTTLITKGPPNAVAYRYRGNLYTYVNK 426

Query: 387 EKLAIKQLRENNDIIIRPADK---GGKTVVMDKADYTQKMTSILNSNDYEIIPGDPTKTI 443
             LAI  + +  D+  + A+     G    + +ADY Q +     S   ++ PG  T  +
Sbjct: 427 PALAIADISKAIDLAPKEAESYAVRGLAYAL-QADYKQAVQDF--STSIKLDPGSKTIYV 483

Query: 444 EESEKYGNLENESGQKHAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEAL 503
             +  Y  L N    K A  D+T+A        ++DPN  D Y +RG++Y   G+ + A 
Sbjct: 484 NRALAYKYLNN---YKAAIKDYTQAI-------ELDPNDVDVYKERGKVYEQMGKKDLAA 533

Query: 504 RNLDKTIAL 512
            +  K  A+
Sbjct: 534 ADFKKAGAV 542


>gi|296127342|ref|YP_003634594.1| hypothetical protein [Brachyspira murdochii DSM 12563]
 gi|296019158|gb|ADG72395.1| TPR repeat-containing protein [Brachyspira murdochii DSM 12563]
          Length = 352

 Score = 73.6 bits (179), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 69/265 (26%), Positives = 123/265 (46%), Gaps = 45/265 (16%)

Query: 110 FTSQSTKAIEDLTQLVEDTS--VDPKIKVNAHIKRAVVHLH----------AASDFTKAF 157
           F  +  K I D T L+   +  VD K +V+      +   H          A  ++ +A 
Sbjct: 59  FNEELNKIISDKTYLIGSFTNIVDNKKEVDIDRLNNLTDYHDYNSKGIYKSANGEYAEAI 118

Query: 158 ADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQRHFVVHK 217
              DEA K++PN++D+YY +       G  +EA+   DK I L  ++  A   R  +   
Sbjct: 119 KYYDEAIKLNPNMSDAYYNKAIAKTKLGLLKEAIEEYDKAIELRADYADAYYNRGLLKSD 178

Query: 218 MIVPGDRERVEQSLKEFR-------NFVDTHSN--VVE-ACTLFAQVLVDQEDFDGAEEY 267
           +++      +E+++K+F        N  D ++N  V+E    LF + + D          
Sbjct: 179 LVL------LEEAIKDFDKALSIDPNLFDAYNNKGVLENELGLFKEAIKD---------- 222

Query: 268 FNRSIRVDPENASLYVHRAMLMLQARGNV---DEAIKLIEKAISIDKSCMFAYETLGTIE 324
           FN++I++   +A +Y +R      ++ N+   +EAIK  +KAI ++ +   AY   G  +
Sbjct: 223 FNKAIKISDNDAVIYNNRG----NSKYNLELYEEAIKDYDKAIKLNPNYALAYNNRGNAK 278

Query: 325 VQRGRLEEAVKCFNKALPLARDEAE 349
              G  EEA++ F+KA+ L  D A+
Sbjct: 279 DNLGLYEEAIEDFDKAIKLKPDYAD 303



 Score = 62.0 bits (149), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 71/264 (26%), Positives = 116/264 (43%), Gaps = 36/264 (13%)

Query: 264 AEEYFNRSIRVDPENASLYVHRAMLMLQARGNVDEAIKLIEKAISIDKSCMFAYETLGTI 323
           A +Y++ +I+++P  +  Y ++A+   +  G + EAI+  +KAI +      AY   G +
Sbjct: 117 AIKYYDEAIKLNPNMSDAYYNKAIAKTKL-GLLKEAIEEYDKAIELRADYADAYYNRGLL 175

Query: 324 EVQRGRLEEAVKCFNKALPLARDEAELSHIYSLRDAAIAQMKVCERYNIKKKVSPRSQNI 383
           +     LEEA+K F+KAL +           +L DA          YN        ++ +
Sbjct: 176 KSDLVLLEEAIKDFDKALSIDP---------NLFDA----------YN--------NKGV 208

Query: 384 TKNEKLAIKQLRENNDIIIRPADKGGKTVVMDKADYTQKMTSILNSNDYEIIPGDPTKTI 443
            +NE    K+        I+  +K  K    D   Y  +  S  N   YE    D  K I
Sbjct: 209 LENELGLFKE-------AIKDFNKAIKISDNDAVIYNNRGNSKYNLELYEEAIKDYDKAI 261

Query: 444 EESEKYGNLENESGQ-KHAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEA 502
           + +  Y    N  G  K     + +A  D D+A K+ P+ AD+Y  RG      G YEEA
Sbjct: 262 KLNPNYALAYNNRGNAKDNLGLYEEAIEDFDKAIKLKPDYADAYNNRGLTKENLGLYEEA 321

Query: 503 LRNLDKTIALNPNFHVARAQRHFV 526
           L++  K + L+PN   A+    ++
Sbjct: 322 LKDYKKALKLDPNNEYAKENIKYL 345



 Score = 55.5 bits (132), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 42/173 (24%), Positives = 87/173 (50%), Gaps = 7/173 (4%)

Query: 156 AFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQRHFVV 215
           A  D D+A  +DPN+ D+Y  +G +    G ++EA+++ +K I ++ N  V    R    
Sbjct: 185 AIKDFDKALSIDPNLFDAYNNKGVLENELGLFKEAIKDFNKAIKISDNDAVIYNNRGNSK 244

Query: 216 HKMIVPGDRERVEQSLKEFRNFVDTHSNVVEACTLFAQVLVDQEDFDGAEEYFNRSIRVD 275
           + +      E  E+++K++   +  + N   A         +   ++ A E F+++I++ 
Sbjct: 245 YNL------ELYEEAIKDYDKAIKLNPNYALAYNNRGNAKDNLGLYEEAIEDFDKAIKLK 298

Query: 276 PENASLYVHRAMLMLQARGNVDEAIKLIEKAISIDKSCMFAYETLGTIEVQRG 328
           P+ A  Y +R  L  +  G  +EA+K  +KA+ +D +  +A E +  ++ + G
Sbjct: 299 PDYADAYNNRG-LTKENLGLYEEALKDYKKALKLDPNNEYAKENIKYLKEEYG 350



 Score = 47.0 bits (110), Expect = 0.027,   Method: Compositional matrix adjust.
 Identities = 34/114 (29%), Positives = 55/114 (48%), Gaps = 6/114 (5%)

Query: 105 ATVYIFTSQSTKAIEDLTQLVEDTSVDPKIKVNAHIKRAVVHLHAASD----FTKAFADL 160
           A +Y     S   +E   + ++D   D  IK+N +   A  +   A D    + +A  D 
Sbjct: 234 AVIYNNRGNSKYNLELYEEAIKD--YDKAIKLNPNYALAYNNRGNAKDNLGLYEEAIEDF 291

Query: 161 DEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQRHFV 214
           D+A K+ P+ AD+Y  RG      G YEEAL++  K + L+PN   A+    ++
Sbjct: 292 DKAIKLKPDYADAYNNRGLTKENLGLYEEALKDYKKALKLDPNNEYAKENIKYL 345



 Score = 46.2 bits (108), Expect = 0.049,   Method: Compositional matrix adjust.
 Identities = 33/119 (27%), Positives = 57/119 (47%), Gaps = 11/119 (9%)

Query: 117 AIEDLTQLVEDTSVDPKIKVNAHIKRAVVHLHAASDFTKAFADLDEAEKVDPNVADSYYQ 176
           AI+D  + ++ +  D  I  N    +  + L     + +A  D D+A K++PN A +Y  
Sbjct: 219 AIKDFNKAIKISDNDAVIYNNRGNSKYNLEL-----YEEAIKDYDKAIKLNPNYALAYNN 273

Query: 177 RGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQRHFVVHKMIVPGDRERVEQSLKEFR 235
           RG      G YEEA+ + DK I L P++  A   R      + +       E++LK+++
Sbjct: 274 RGNAKDNLGLYEEAIEDFDKAIKLKPDYADAYNNRGLTKENLGL------YEEALKDYK 326


>gi|323352547|gb|EGA85046.1| Tom70p [Saccharomyces cerevisiae VL3]
          Length = 617

 Score = 73.6 bits (179), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 66/250 (26%), Positives = 120/250 (48%), Gaps = 15/250 (6%)

Query: 135 KVNAHIKRAVVHLHAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNL 194
           +VN++I  A++ +   +D T+ +   D+A K+D N +  YY RGQ+  +   Y++A ++ 
Sbjct: 362 RVNSYIYMALI-MADRNDSTEYYNXFDKALKLDSNNSSVYYHRGQMNFILQNYDQAGKDF 420

Query: 195 DKTIALNPNFHVARAQRHFVVHKMIVPGDRERVEQSLKEFRNFVDTHSNVVEACTLFAQV 254
           DK   L+P       Q   + ++     D E +    K  R F +      E    FA++
Sbjct: 421 DKAKELDPENIFPYIQLACLAYRENKFDDCETLFSEAK--RKFPEAP----EVPNFFAEI 474

Query: 255 LVDQEDFDGAEEYFNRSIRVDPENASLYVHRAMLMLQAR--------GNVDEAIKLIEKA 306
           L D+ DFD A + ++ +I ++ +   +YV  A L+ +A          N  EA  L+EKA
Sbjct: 475 LTDKNDFDKALKQYDLAIELENKLDGIYVGIAPLVGKATLLTRNPTVENFIEATNLLEKA 534

Query: 307 ISIDKSCMFAYETLGTIEVQRGRLEEAVKCFNKALPLARDEAELSHIYSLRDAAIAQMKV 366
             +D     A   L  +++Q+  ++EA+  F ++  LAR   E     +  +AA  Q ++
Sbjct: 535 SKLDPRSEQAKIGLAQMKLQQEDIDEAITLFEESADLARTMEEKLQAITFAEAAKVQQRI 594

Query: 367 CERYNIKKKV 376
                + KK+
Sbjct: 595 RSDPVLAKKI 604



 Score = 38.5 bits (88), Expect = 8.9,   Method: Compositional matrix adjust.
 Identities = 18/52 (34%), Positives = 31/52 (59%)

Query: 463 SDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNP 514
           +D T+ +   D+A K+D N +  YY RGQ+  +   Y++A ++ DK   L+P
Sbjct: 377 NDSTEYYNXFDKALKLDSNNSSVYYHRGQMNFILQNYDQAGKDFDKAKELDP 428


>gi|428212874|ref|YP_007086018.1| capsular polysaccharide biosynthesis protein [Oscillatoria
           acuminata PCC 6304]
 gi|428001255|gb|AFY82098.1| capsular polysaccharide biosynthesis protein [Oscillatoria
           acuminata PCC 6304]
          Length = 791

 Score = 73.6 bits (179), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 50/197 (25%), Positives = 90/197 (45%), Gaps = 7/197 (3%)

Query: 145 VHLHAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNF 204
           V L +     +AF+   +A  + PN+A  +++ G +     + E A+     TI L P++
Sbjct: 186 VFLESQGKIEEAFSCFQKAIMLQPNLAAGHFKLGYLLQQQNELESAIDCFKSTIELQPDW 245

Query: 205 HVARAQRHFVVHKMIVPGDRERVEQSLKEFRNFVDTHSNVVEACTLFAQVLVDQEDFDGA 264
           + A      V+ K+       R E+++  F+  ++ + N  EA       L  Q   + A
Sbjct: 246 NEAHNNLGLVLRKI------NREEEAISSFKKAIEINPNFAEAYRNLGTTLQQQGKLEAA 299

Query: 265 EEYFNRSIRVDPENASLYVHRAMLMLQARGNVDEAIKLIEKAISIDKSCMFAYETLGTIE 324
                  I++ P N +L       +L+ +G +DEA   +  AI+++     AY  LG I 
Sbjct: 300 AACLRDCIKIQP-NFALAHGNLGYVLEQQGKLDEAKASLRHAIALEPDLAMAYGNLGNIL 358

Query: 325 VQRGRLEEAVKCFNKAL 341
            + G LEE++ CF  A+
Sbjct: 359 HREGELEESISCFQNAI 375



 Score = 56.6 bits (135), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 43/197 (21%), Positives = 84/197 (42%), Gaps = 7/197 (3%)

Query: 153 FTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQRH 212
           +T+A A   +  ++ PN A  Y   G      G+ E A+R   + + LNP F    A + 
Sbjct: 22  WTEAVALCHQLIQIQPNFAPIYKTLGNSLQAQGKLEAAMRAYHRALVLNPEFAEVHANQG 81

Query: 213 FVVHKMIVPGDRERVEQSLKEFRNFVDTHSNVVEACTLFAQVLVDQEDFDGAEEYFNRSI 272
            + +++        ++ ++  ++  ++   N         +V  +Q   +    Y   ++
Sbjct: 82  TIFYQL------GELDSAILCYQKALNLQPNWAGIYWNLGKVYKEQGRVEEGIAYQKTAL 135

Query: 273 RVDPENASLYVHRAM-LMLQARGNVDEAIKLIEKAISIDKSCMFAYETLGTIEVQRGRLE 331
            ++P      +H  + + L  RGN++E     ++       C  AY  LG     +G++E
Sbjct: 136 TLNPSQFPPDLHNQVGVELSKRGNIEETTAFYKQFTETYPDCGPAYLNLGVFLESQGKIE 195

Query: 332 EAVKCFNKALPLARDEA 348
           EA  CF KA+ L  + A
Sbjct: 196 EAFSCFQKAIMLQPNLA 212



 Score = 51.6 bits (122), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 44/188 (23%), Positives = 79/188 (42%), Gaps = 5/188 (2%)

Query: 162 EAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQRHFVVHKMIVP 221
           +A  + PN A  Y+  G++Y   G+ EE +      + LNP+           V      
Sbjct: 99  KALNLQPNWAGIYWNLGKVYKEQGRVEEGIAYQKTALTLNPSQFPPDLHNQVGVEL---- 154

Query: 222 GDRERVEQSLKEFRNFVDTHSNVVEACTLFAQVLVDQEDFDGAEEYFNRSIRVDPENASL 281
             R  +E++   ++ F +T+ +   A       L  Q   + A   F ++I + P  A+ 
Sbjct: 155 SKRGNIEETTAFYKQFTETYPDCGPAYLNLGVFLESQGKIEEAFSCFQKAIMLQPNLAAG 214

Query: 282 YVHRAMLMLQARGNVDEAIKLIEKAISIDKSCMFAYETLGTIEVQRGRLEEAVKCFNKAL 341
           +     L LQ +  ++ AI   +  I +      A+  LG +  +  R EEA+  F KA+
Sbjct: 215 HFKLGYL-LQQQNELESAIDCFKSTIELQPDWNEAHNNLGLVLRKINREEEAISSFKKAI 273

Query: 342 PLARDEAE 349
            +  + AE
Sbjct: 274 EINPNFAE 281



 Score = 51.2 bits (121), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 45/181 (24%), Positives = 77/181 (42%), Gaps = 7/181 (3%)

Query: 168 PNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQRHFVVHKMIVPGDRERV 227
           P+   +Y   G      G+ EEA     K I L PN     A  HF +  ++    +  +
Sbjct: 175 PDCGPAYLNLGVFLESQGKIEEAFSCFQKAIMLQPNL----AAGHFKLGYLL--QQQNEL 228

Query: 228 EQSLKEFRNFVDTHSNVVEACTLFAQVLVDQEDFDGAEEYFNRSIRVDPENASLYVHRAM 287
           E ++  F++ ++   +  EA      VL      + A   F ++I ++P  A  Y +   
Sbjct: 229 ESAIDCFKSTIELQPDWNEAHNNLGLVLRKINREEEAISSFKKAIEINPNFAEAYRNLGT 288

Query: 288 LMLQARGNVDEAIKLIEKAISIDKSCMFAYETLGTIEVQRGRLEEAVKCFNKALPLARDE 347
             LQ +G ++ A   +   I I  +   A+  LG +  Q+G+L+EA      A+ L  D 
Sbjct: 289 -TLQQQGKLEAAAACLRDCIKIQPNFALAHGNLGYVLEQQGKLDEAKASLRHAIALEPDL 347

Query: 348 A 348
           A
Sbjct: 348 A 348



 Score = 47.4 bits (111), Expect = 0.020,   Method: Compositional matrix adjust.
 Identities = 46/206 (22%), Positives = 89/206 (43%), Gaps = 11/206 (5%)

Query: 147 LHAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHV 206
           L A      A      A  ++P  A+ +  +G I+   G+ + A+    K + L PN+  
Sbjct: 50  LQAQGKLEAAMRAYHRALVLNPEFAEVHANQGTIFYQLGELDSAILCYQKALNLQPNW-- 107

Query: 207 ARAQRHFVVHKMIVPGDRERVEQSLKEFRNFVDTHSNVVEACTLFAQVLVDQEDFDGAEE 266
             A  ++ + K  V  ++ RVE+ +   +  +  + +      L  QV V+       EE
Sbjct: 108 --AGIYWNLGK--VYKEQGRVEEGIAYQKTALTLNPSQFPP-DLHNQVGVELSKRGNIEE 162

Query: 267 ---YFNRSIRVDPENASLYVHRAMLMLQARGNVDEAIKLIEKAISIDKSCMFAYETLGTI 323
              ++ +     P+    Y++  +  L+++G ++EA    +KAI +  +    +  LG +
Sbjct: 163 TTAFYKQFTETYPDCGPAYLNLGVF-LESQGKIEEAFSCFQKAIMLQPNLAAGHFKLGYL 221

Query: 324 EVQRGRLEEAVKCFNKALPLARDEAE 349
             Q+  LE A+ CF   + L  D  E
Sbjct: 222 LQQQNELESAIDCFKSTIELQPDWNE 247


>gi|256273826|gb|EEU08748.1| Tom70p [Saccharomyces cerevisiae JAY291]
          Length = 617

 Score = 73.6 bits (179), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 66/250 (26%), Positives = 121/250 (48%), Gaps = 15/250 (6%)

Query: 135 KVNAHIKRAVVHLHAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNL 194
           +VN++I  A++ +   +D T+ +   D+A K+D N +  YY RGQ+  +   Y++A ++ 
Sbjct: 362 RVNSYIYMALI-MADRNDSTEYYNYFDKALKLDSNNSSVYYHRGQMNFILQNYDQAGKDF 420

Query: 195 DKTIALNPNFHVARAQRHFVVHKMIVPGDRERVEQSLKEFRNFVDTHSNVVEACTLFAQV 254
           DK   L+P       Q   + ++     D E +    K  R F ++     E    FA++
Sbjct: 421 DKAKELDPENIFPYIQLACLAYRENKFDDCETLFSEAK--RKFPESP----EVPNFFAEI 474

Query: 255 LVDQEDFDGAEEYFNRSIRVDPENASLYVHRAMLMLQAR--------GNVDEAIKLIEKA 306
           L D+ DFD A + ++ +I ++ +   +YV  A L+ +A          N  EA  L+EKA
Sbjct: 475 LTDKNDFDKALKQYDLAIELENKLDGIYVGIAPLVGKATLLTRNPTVENFIEATNLLEKA 534

Query: 307 ISIDKSCMFAYETLGTIEVQRGRLEEAVKCFNKALPLARDEAELSHIYSLRDAAIAQMKV 366
             +D     A   L  +++Q+  ++EA+  F ++  LAR   E     +  +AA  Q ++
Sbjct: 535 SKLDPRSEQAKIGLAQMKLQQEDIDEAITLFEESADLARTMEEKLQAITFAEAAKVQQRI 594

Query: 367 CERYNIKKKV 376
                + KK+
Sbjct: 595 RSDPVLAKKI 604


>gi|334117425|ref|ZP_08491516.1| Tetratricopeptide TPR_1 repeat-containing protein [Microcoleus
           vaginatus FGP-2]
 gi|333460534|gb|EGK89142.1| Tetratricopeptide TPR_1 repeat-containing protein [Microcoleus
           vaginatus FGP-2]
          Length = 673

 Score = 73.6 bits (179), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 85/407 (20%), Positives = 161/407 (39%), Gaps = 49/407 (12%)

Query: 121 LTQLVEDTSVDPKIKVNAHIKRAVVHLHAASDFTKAFADLDEAEKVDPNVADSYYQRGQI 180
           +  L+++    P+ +     ++ +++ +A  +  KA A  D+A +  P+   ++Y RG  
Sbjct: 214 IQSLIDEDGQTPEQQAELFYEQGLLYGYA-EESAKAIASFDKALEFKPDNHVAWYNRGIA 272

Query: 181 YCLFGQYEEALRNLDKTIALNPNFHVARAQRHFVVHKMIVPGDRERVEQSLKEFRNFVDT 240
               G++EEA+ + DK +   P+   A   R       I  G+  ++E ++  +   ++ 
Sbjct: 273 LGSLGRFEEAIASYDKALEFKPDEEYAWNNRG------IALGNLGKLEAAIASYDKALEI 326

Query: 241 HSNVVEACTLFAQVLVDQEDFDGAEEYFNRSIRVDPENASLYVHRAMLMLQARGNVDEAI 300
             +  EA       L +    + A   F++++ + PE    + +R  + L   G  +EAI
Sbjct: 327 KPDYHEAWNNRGIALGNLGRLEAAITSFDKALEIKPEYHEAWNNRG-IALGNLGRWEEAI 385

Query: 301 KLIEKAISIDKSCMFAYETLGTIEVQRGRLEEAVKCFNKALPLARDEAELSHIYSLRDAA 360
              ++A+        A+   G+     GRLE A+  ++KAL +   +A     +  R  A
Sbjct: 386 VSYDQALEFKADLYEAWNNRGSALGNLGRLEAAIASYDKALEI---KAYSYEAWYNRGIA 442

Query: 361 IAQMKVCE----RYNIKKKVSPRSQNITKNEKLAIKQLRENNDIIIRPADKGGKTVVMDK 416
           +  +   E     Y+   ++ P       N  +A+  L    + I             DK
Sbjct: 443 LDNLGRWEAAIASYDKALEIKPDYHVPWNNRGIALGNLGRLEEAI----------ASFDK 492

Query: 417 ADYTQKMTSILNSNDYEIIPGDPTKTIEESEKYGNLENESGQKHAASDFTKAFADLDEAE 476
           A               EI P D           GNL            + +A A  D+A 
Sbjct: 493 A--------------LEIKPDDDEAWYNRGIALGNL----------GRWEEAIASFDKAL 528

Query: 477 KVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQR 523
           ++ P+    +Y RG      G+ +EA+ + DK +   P+ H A   R
Sbjct: 529 EIKPDYHVGWYNRGNALGNLGRGKEAIASYDKALEFKPDDHAAWYYR 575



 Score = 53.5 bits (127), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 45/213 (21%), Positives = 89/213 (41%), Gaps = 43/213 (20%)

Query: 145 VHLHAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNF 204
           + L       +A A  D+A ++ P+  +++Y RG      G++EEA+ + DK + + P++
Sbjct: 475 IALGNLGRLEEAIASFDKALEIKPDDDEAWYNRGIALGNLGRWEEAIASFDKALEIKPDY 534

Query: 205 HVARAQRHFVVHKMIVPGDRERVEQSLKEFRNFVDTHSNVVEACTLFAQVLVDQEDFDGA 264
           HV    R   +      G+  R ++++  +                              
Sbjct: 535 HVGWYNRGNAL------GNLGRGKEAIASY------------------------------ 558

Query: 265 EEYFNRSIRVDPENASLYVHRAMLMLQARGNVDEAIKLIEKAISIDKSCMFAYETLGTIE 324
               ++++   P++ + + +R  + L   G  +EAI   +KA+        A+   G   
Sbjct: 559 ----DKALEFKPDDHAAWYYRG-ISLDDLGRGEEAIASYDKALEFKPDDDAAWNNRGLAL 613

Query: 325 VQRGRLEEAVKCFNKALPLARDEAELSHIYSLR 357
              GRLEEA+  ++KAL    D+   +  YS+R
Sbjct: 614 GNLGRLEEAIASYDKALEFKPDDD--AAWYSIR 644


>gi|164687574|ref|ZP_02211602.1| hypothetical protein CLOBAR_01215 [Clostridium bartlettii DSM
           16795]
 gi|164603348|gb|EDQ96813.1| tetratricopeptide repeat protein [Clostridium bartlettii DSM 16795]
          Length = 523

 Score = 73.2 bits (178), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 88/380 (23%), Positives = 164/380 (43%), Gaps = 48/380 (12%)

Query: 130 VDPKIKVNAHIKRAVVHLHAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEE 189
           +DP  +V A+    V + +   ++ KA     +A ++D N   +YY RG+I    G+Y+E
Sbjct: 179 IDPNYEV-AYYNLGVSYSNL-KEYDKAMESYRKALELDENDVSAYYNRGRILAYLGRYKE 236

Query: 190 ALRNLDKTIALNPNFHVARAQRHFVVHKMIVPGDRERVEQSLKEFRNFVDTHSNVVEACT 249
           AL++    I L         +R  + + M      ++ + +L +++ FV+   ++ E   
Sbjct: 237 ALKDFTNAINLEKYDERLLYERAGIFYLM------KKYKDALLDYKAFVNLAPHMKEGYL 290

Query: 250 LFAQVLVDQEDFDGAEEYFNRSIRVDPENASLYVHRAMLMLQARGNVDEAIKLIEKAISI 309
             A         + A EY+N+SI +DP     Y +R++  L+ + ++ +AIK ++K I +
Sbjct: 291 GMADCYCQMNQMNNAIEYYNKSIEIDPNYEESYFNRSVAYLK-QDDLRKAIKDLDKVIGL 349

Query: 310 DKSCMFAYETLGTIEVQRGRLEEAVKCFNKALPLARDEAELSHIYSLRDAAIAQMKVCER 369
           +     AY                   +N+AL   R E   +H   +RD + A   +   
Sbjct: 350 NPKNGEAY-------------------YNRALAYGRIE---NHTKVIRDFSKA---IKMG 384

Query: 370 YNIKKKVSPRSQ--NITKNEKLAIKQLRENNDIIIRPADKGGKTVVMDKADYTQKMTSIL 427
           Y + K    R +  ++T N K A        D   R  + G  + ++    Y  +  + L
Sbjct: 385 YKVGKSYCNRGKEYSLTGNFKKA-------KDDYTRSIEHGYDSYIV----YMGRGAANL 433

Query: 428 NSNDYEIIPGDPTKTIE-ESEKYGNLENESGQKHAASDFTKAFADLDEAEKVDPNVADSY 486
           +  +Y     D  K IE ++ K GN        +    + +A  D   A +  P+   +Y
Sbjct: 434 DLEEYNEAILDFNKAIELDNTKLGNYYYRGLAYYNLKQYKEAIDDFSVAIEGCPSDIRAY 493

Query: 487 YQRGQIYCLFGQYEEALRNL 506
            +RG  YC  G Y+ A+++ 
Sbjct: 494 EKRGDAYCRIGDYDNAIKDF 513



 Score = 56.2 bits (134), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 91/426 (21%), Positives = 173/426 (40%), Gaps = 59/426 (13%)

Query: 164 EKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQRHFVVHKMIVPGD 223
           EK D + AD YY RG  Y  F ++  A+++ +K I L+ N+  A   +     ++   GD
Sbjct: 110 EKYD-DCADGYYYRGDFYIKFEKFYSAIKDFEKVIQLDKNYKEAYRGKGVCYSRL---GD 165

Query: 224 RERVEQSLKEFRNFVDTHSNVVEACTLFAQVLVDQEDFDGAEEYFNRSIRVDPENASLYV 283
               + ++K +   +    N   A         + +++D A E + +++ +D  + S Y 
Sbjct: 166 N---DLAIKNYEKALQIDPNYEVAYYNLGVSYSNLKEYDKAMESYRKALELDENDVSAYY 222

Query: 284 HRAMLMLQARGNVDEAIKLIEKAISIDK---------SCMF------------------- 315
           +R  + L   G   EA+K    AI+++K         + +F                   
Sbjct: 223 NRGRI-LAYLGRYKEALKDFTNAINLEKYDERLLYERAGIFYLMKKYKDALLDYKAFVNL 281

Query: 316 ------AYETLGTIEVQRGRLEEAVKCFNKALPLARDEAELSHIYSLRDAAIAQMKVCE- 368
                  Y  +     Q  ++  A++ +NK++ +  +  E     S  + ++A +K  + 
Sbjct: 282 APHMKEGYLGMADCYCQMNQMNNAIEYYNKSIEIDPNYEE-----SYFNRSVAYLKQDDL 336

Query: 369 RYNIKK-----KVSPRSQNITKNEKLAIKQLRENNDIIIRPADKGGKTVVMDKADYTQKM 423
           R  IK       ++P++     N  LA  ++ EN+  +IR   K  K        Y  + 
Sbjct: 337 RKAIKDLDKVIGLNPKNGEAYYNRALAYGRI-ENHTKVIRDFSKAIKMGYKVGKSYCNRG 395

Query: 424 TSILNSNDYEIIPGDPTKTIEESEKYGNLENESGQKHAASD---FTKAFADLDEAEKVDP 480
                + +++    D T++IE    Y +     G+  A  D   + +A  D ++A ++D 
Sbjct: 396 KEYSLTGNFKKAKDDYTRSIEHG--YDSYIVYMGRGAANLDLEEYNEAILDFNKAIELDN 453

Query: 481 NVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQRHFVWTSTLAELMAFSDE 540
               +YY RG  Y    QY+EA+ +    I   P+   A  +R   +        A  D 
Sbjct: 454 TKLGNYYYRGLAYYNLKQYKEAIDDFSVAIEGCPSDIRAYEKRGDAYCRIGDYDNAIKDF 513

Query: 541 FMIPKI 546
           FMI ++
Sbjct: 514 FMISRL 519


>gi|119487585|ref|ZP_01621195.1| TPR repeat protein [Lyngbya sp. PCC 8106]
 gi|119455754|gb|EAW36890.1| TPR repeat protein [Lyngbya sp. PCC 8106]
          Length = 1107

 Score = 73.2 bits (178), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 46/203 (22%), Positives = 108/203 (53%), Gaps = 9/203 (4%)

Query: 155 KAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQRHFV 214
           KA AD  +A ++ PN A  ++  G+I+   G++EE++++    + + PN + A+   H  
Sbjct: 380 KAIADYQQALELQPNFAVVHWNLGKIFQRLGRFEESIKSWKTALEIQPNLNGAKL--HIE 437

Query: 215 VHKMIVPGDRERVEQSLKEFRNFVDTHSNVVEACTLFAQVLVDQEDFDGAEEYFNRSIRV 274
           +  ++    +++ + ++  ++  ++   + VEA      +  +Q+ ++ A + F   I++
Sbjct: 438 LGNLLT--GQKQFKAAISSYQKALEIQPSEVEAHLNLGCLYSEQKQYETAIKTFQAGIQI 495

Query: 275 DPENASLYVHRAMLMLQARGNVDEAIKLIEKAISIDKSCMFAYETLGTIEVQRGRLEEAV 334
           +P+N  LY++    +++   +  EAI   +  ++I      AY +LG I    G++++A+
Sbjct: 496 NPKNLDLYLNMGFALVKLNHH-QEAINCYQNLLNIQPDNKEAYASLGNIYANAGQVKQAI 554

Query: 335 KCFNKALPLARDEAE----LSHI 353
           + + +A+ +  D AE    L+HI
Sbjct: 555 ENYEQAIKIKPDWAEIYCRLAHI 577



 Score = 60.5 bits (145), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 87/394 (22%), Positives = 151/394 (38%), Gaps = 68/394 (17%)

Query: 145 VHLHAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNF 204
           +    A  +  A A   +A ++ P+ A+ Y +  + + L GQ E  ++ +   + L PNF
Sbjct: 14  IEFQEAGKWGSAIASYQQALQIAPHQAEIYQKLAEAFVLNGQLEAGIKAIQTAVNLKPNF 73

Query: 205 HVARAQRHFVVHKMIVPGDRERVEQSLKEFRNFVDTHSNVVEACTLFAQVLVDQEDFDGA 264
            VA      V+ +      + ++E ++  +   +D      EA          Q +    
Sbjct: 74  AVAYLSIGNVLQQ------QNQIELAIWAYTEALDVKPEFTEA----------QANL--- 114

Query: 265 EEYFNRSIRVDPENASLYVHRAMLMLQARGNVDEAIKLIEKAISIDKSCMFAYETLGTIE 324
                          S+Y H     LQ      EAI+  +KAI  D +    Y  LG   
Sbjct: 115 --------------GSMYYH-----LQ---RFSEAIQCYQKAIYFDSNSAIIYWMLGNAF 152

Query: 325 VQRGRLEEAVKCFNKALPLARDEAELSHIYSLRDAAI--AQMKVCERYNIKKKVSPRSQN 382
            Q  +LE+A+ C+ KA+ L  ++ +    + L+ AAI   Q K  +  +  + +  R Q 
Sbjct: 153 SQTDQLEKAISCYQKAIDLQPNQVK----FYLKLAAILDIQGKTIQAISYYQTIL-RLQP 207

Query: 383 ITKNEKLAIKQLRENNDIIIRPADKGGKTVVMDK--------ADYTQKMTSILNSNDYEI 434
                 +A++QL + +D      +  G + V +          D    +T  + +  +  
Sbjct: 208 DCSEAIVALRQLTQVDDPNNWANNLTGLSFVSNSREEFEEGGVDLASPLTEAIETEQHYP 267

Query: 435 IPGDPTKTI--EESE-------KYGNLENESGQKHAASD---FTKAFADLDEAEKVDPNV 482
           I    T  I  E +E       KY  L+    Q     D   F +A     +A K+ P  
Sbjct: 268 INHSQTDDIFVENAENITPLETKYNELKAYQSQAKFCVDQGQFEQAITICQQALKIQPKF 327

Query: 483 ADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNF 516
             +Y   G      G+ E A+R   + + L PNF
Sbjct: 328 YHAYVILGNALHFQGKLEAAIRAYSQVLKLQPNF 361



 Score = 45.8 bits (107), Expect = 0.051,   Method: Compositional matrix adjust.
 Identities = 73/369 (19%), Positives = 151/369 (40%), Gaps = 80/369 (21%)

Query: 175 YQRGQIYCL-FGQYEEALRNLDKTIALNPNFHVARAQRHFVVHKMIVPGD----RERVEQ 229
           YQ    +C+  GQ+E+A+    + + + P F+          H  ++ G+    + ++E 
Sbjct: 297 YQSQAKFCVDQGQFEQAITICQQALKIQPKFY----------HAYVILGNALHFQGKLEA 346

Query: 230 SLKEFRNFVDTHSNVVEA----CTLFAQVLVDQEDFDGAEEYFNRSIRVDPENASLYVHR 285
           +++ +   +    N  E      T++A++       D A   + +++ + P  A ++ + 
Sbjct: 347 AIRAYSQVLKLQPNFAEIYGNRGTMYAKL----NQIDKAIADYQQALELQPNFAVVHWNL 402

Query: 286 AMLMLQARGNVDEAIKLIEKAISIDKSCMFA--YETLGTIEVQRGRLEEAVKCFNKALPL 343
             +  Q  G  +E+IK  + A+ I  +   A  +  LG +   + + + A+  + KAL +
Sbjct: 403 GKI-FQRLGRFEESIKSWKTALEIQPNLNGAKLHIELGNLLTGQKQFKAAISSYQKALEI 461

Query: 344 ARDEAE----LSHIYSLRDAAIAQMKVCERYNIKKKVSPRSQNITKNEKLAIKQLRENND 399
              E E    L  +YS +      +K    +    +++P++ ++  N   A+ +L  + +
Sbjct: 462 QPSEVEAHLNLGCLYSEQKQYETAIKT---FQAGIQINPKNLDLYLNMGFALVKLNHHQE 518

Query: 400 IIIRPADKGGKTVVMDKADYTQKMTSILNSNDYEIIPGDPTKTIEESEKYGNLENESGQK 459
            I                +  Q + +I   N             E     GN+   +GQ 
Sbjct: 519 AI----------------NCYQNLLNIQPDNK------------EAYASLGNIYANAGQ- 549

Query: 460 HAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFG------QYEEALRNLDKTIALN 513
                  +A  + ++A K+ P+ A+       IYC         Q + A+ NL+K+I LN
Sbjct: 550 -----VKQAIENYEQAIKIKPDWAE-------IYCRLAHIQKQDQPQVAIANLEKSIELN 597

Query: 514 PNFHVARAQ 522
           PN+  A  Q
Sbjct: 598 PNYIEAHQQ 606


>gi|428209080|ref|YP_007093433.1| hypothetical protein Chro_4160 [Chroococcidiopsis thermalis PCC
           7203]
 gi|428011001|gb|AFY89564.1| Tetratricopeptide TPR_1 repeat-containing protein
           [Chroococcidiopsis thermalis PCC 7203]
          Length = 588

 Score = 73.2 bits (178), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 50/202 (24%), Positives = 97/202 (48%), Gaps = 13/202 (6%)

Query: 151 SDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQ 210
            D ++A A+  +A   +PN AD+YYQRG      G  + AL + D+ +  +PN+  A  Q
Sbjct: 284 GDRSRAIANYTQAIARNPNYADAYYQRGNARYDQGDKQGALADYDQALKFDPNYANAYYQ 343

Query: 211 RHFVVHKMIVPGDRERVEQSLKEFRNFVDTHSNVVEACTLFAQVLVDQEDFDGAEEYFNR 270
           R  +++      +R   +++L  F  ++    N  +A      +     D  G  + F+R
Sbjct: 344 RAVILY------NRGNKQEALSSFDRYITLVPNDAQAYHSRGAIRRSMGDGQGTFDDFDR 397

Query: 271 SIRVDPENASLYVHRAM---LMLQARGNVDEAIKLIEKAISIDKSCMFAYETLGTIEVQR 327
            +R++P+N+  Y +RA+   ++  ++G +D+       A+++D S    Y     +  + 
Sbjct: 398 VVRLEPDNSRAYYNRALARTMLRDSKGALDD----FSHALNLDPSWTTVYNNRAILRRRL 453

Query: 328 GRLEEAVKCFNKALPLARDEAE 349
           G  + AV  F+K + +    AE
Sbjct: 454 GDRQGAVDDFSKVISIEPKNAE 475



 Score = 60.8 bits (146), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 54/185 (29%), Positives = 83/185 (44%), Gaps = 7/185 (3%)

Query: 151 SDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQ 210
            D   A AD D+A K DPN A++YYQR  I    G  +EAL + D+ I L PN   A   
Sbjct: 318 GDKQGALADYDQALKFDPNYANAYYQRAVILYNRGNKQEALSSFDRYITLVPNDAQAYHS 377

Query: 211 RHFVVHKMIVPGDRERVEQSLKEFRNFVDTHSNVVEACTLFAQVLVDQEDFDGAEEYFNR 270
           R  +   M   GD    + +  +F   V    +   A    A       D  GA + F+ 
Sbjct: 378 RGAIRRSM---GDG---QGTFDDFDRVVRLEPDNSRAYYNRALARTMLRDSKGALDDFSH 431

Query: 271 SIRVDPENASLYVHRAMLMLQARGNVDEAIKLIEKAISIDKSCMFAYETLGTIEVQRGRL 330
           ++ +DP   ++Y +RA+L  +  G+   A+    K ISI+     A+   G +    G  
Sbjct: 432 ALNLDPSWTTVYNNRAILRRRL-GDRQGAVDDFSKVISIEPKNAEAHYNRGLVRRDLGDR 490

Query: 331 EEAVK 335
           + A++
Sbjct: 491 QGAIE 495



 Score = 49.7 bits (117), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 29/77 (37%), Positives = 41/77 (53%), Gaps = 1/77 (1%)

Query: 440 TKTIEESEKYGNLENESGQ-KHAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQ 498
           T+ I  +  Y +   + G  ++   D   A AD D+A K DPN A++YYQR  I    G 
Sbjct: 294 TQAIARNPNYADAYYQRGNARYDQGDKQGALADYDQALKFDPNYANAYYQRAVILYNRGN 353

Query: 499 YEEALRNLDKTIALNPN 515
            +EAL + D+ I L PN
Sbjct: 354 KQEALSSFDRYITLVPN 370



 Score = 43.1 bits (100), Expect = 0.40,   Method: Compositional matrix adjust.
 Identities = 25/77 (32%), Positives = 41/77 (53%), Gaps = 6/77 (7%)

Query: 450 GNLENESGQKHAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKT 509
           G++E + G      D ++A A+  +A   +PN AD+YYQRG      G  + AL + D+ 
Sbjct: 277 GSVERDRG------DRSRAIANYTQAIARNPNYADAYYQRGNARYDQGDKQGALADYDQA 330

Query: 510 IALNPNFHVARAQRHFV 526
           +  +PN+  A  QR  +
Sbjct: 331 LKFDPNYANAYYQRAVI 347



 Score = 40.4 bits (93), Expect = 2.5,   Method: Compositional matrix adjust.
 Identities = 58/253 (22%), Positives = 105/253 (41%), Gaps = 15/253 (5%)

Query: 57  NESHELDLLSKAKRAFEHEDYLTAIRHCTEEIESTSSNHTKALARLLRATVYIFTSQSTK 116
           N     D  +K     +  D   AI + T+ I   + N   A A   R            
Sbjct: 266 NPKSASDFFAKGSVERDRGDRSRAIANYTQAI---ARNPNYADAYYQRGNARYDQGDKQG 322

Query: 117 AIEDLTQLVEDTSVDPKIKVNAHIKRAVVHLHAASDFTKAFADLDEAEKVDPNVADSYYQ 176
           A+ D  Q ++    DP    NA+ +RAV+ L+   +  +A +  D    + PN A +Y+ 
Sbjct: 323 ALADYDQALK---FDPNY-ANAYYQRAVI-LYNRGNKQEALSSFDRYITLVPNDAQAYHS 377

Query: 177 RGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQRHFVVHKMIVPGDRERVEQSLKEFRN 236
           RG I    G  +    + D+ + L P+   A   R  +   M+   D +          N
Sbjct: 378 RGAIRRSMGDGQGTFDDFDRVVRLEPDNSRAYYNRA-LARTMLR--DSKGALDDFSHALN 434

Query: 237 FVDTHSNVVEACTLFAQVLVDQEDFDGAEEYFNRSIRVDPENASLYVHRAMLMLQARGNV 296
              + + V     +  + L D++   GA + F++ I ++P+NA  + +R  L+ +  G+ 
Sbjct: 435 LDPSWTTVYNNRAILRRRLGDRQ---GAVDDFSKVISIEPKNAEAHYNRG-LVRRDLGDR 490

Query: 297 DEAIKLIEKAISI 309
             AI+ ++ A +I
Sbjct: 491 QGAIEDLQLAANI 503


>gi|443476573|ref|ZP_21066472.1| Tetratricopeptide TPR_2 repeat-containing protein [Pseudanabaena
           biceps PCC 7429]
 gi|443018443|gb|ELS32690.1| Tetratricopeptide TPR_2 repeat-containing protein [Pseudanabaena
           biceps PCC 7429]
          Length = 822

 Score = 73.2 bits (178), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 114/515 (22%), Positives = 211/515 (40%), Gaps = 56/515 (10%)

Query: 38  PILQPDGLSNGVELTNGDTNESHELDLLSKAKRAFEHEDYLTAIRHCTEEIESTSSN--- 94
           P+   +  +N +E T   +       L  +A +  +  DY  AI   TE I    +N   
Sbjct: 39  PVHGINAETNSIEFTKQSSKRLSAQQLHDRAIKKRQGGDYEGAIADYTELIRLEPTNAKA 98

Query: 95  -HTKALARLLRATVYIFTSQSTKAIEDLTQLVEDTSVDPKIKV-NAHIKRAVVHL-HAAS 151
            + +A A+   A+   F     K I DL   + D +   ++++ NA    +        +
Sbjct: 99  YNDRATAKKEIASERKFGDFQAK-ITDLKGALADNNEAIRLELQNASFYSSRAETKQKMN 157

Query: 152 DFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQR 211
           DF  + AD  EA +++P+  D Y  R  ++     Y+ AL + D+ I L P     R   
Sbjct: 158 DFNGSLADYKEAMRLEPSNDDFYRNRAALFVAISDYQAALADYDEAIRLKP-----RGFN 212

Query: 212 HFVVHKMIVPGDRERVEQSLKEFRNFVDTHSNVVEACTLFAQVLVDQ------------- 258
           +FV  + I   D   ++Q  +E   F D+  +    C   A    D+             
Sbjct: 213 YFV--RAIFKED--LIKQQFRETPEFKDSVVDDYTKCIQTADKSYDKHILIGCYNALATF 268

Query: 259 -----EDFDGAEEYFNRSIRVDPENASLYVHRAMLMLQARGNVDEAIKLIEKAISIDKSC 313
                +D+DGA    N +IR++ +++SLY  RA   ++ R +   A+    +AIS+D   
Sbjct: 269 NIDEIQDYDGALAILNEAIRLNSKDSSLYASRAFAKIETR-DYRGALADANEAISLDHKF 327

Query: 314 MFAYETLGTIEVQRGRLEEAVKCFNKALPL-----ARDEAELSHIYSLRDAAIA-QMKVC 367
           + AY +LG  +      + A+  +++A PL       + A +S+   L  +++  + K  
Sbjct: 328 VRAYISLGRAKSYLRDNQGALADYDRAYPLFDKWALNNLARISYYQGLAQSSLGNEQKAL 387

Query: 368 E-----RYNIKKKVSPRSQNITKNEKLAIKQLRENNDIIIRPADKGGKTVVMDKADYTQK 422
           E     R++ +  +  R  +    E  A        D++ RP     + +      Y Q 
Sbjct: 388 EDFDRARFDYEWNLRSRGGSRRDREYYA--------DVLQRPKKAPVEQIKSPTLSY-QS 438

Query: 423 MTSILNSNDYEIIPGDPTKTIEESEKYGNLENESGQ-KHAASDFTKAFADLDEAEKVDPN 481
             +     +Y     D ++ I     + +  N  G  K+   D   A +D  EA ++ P+
Sbjct: 439 GNANSRVGNYRQAIADYSEAIRLKPDFADAFNNRGNAKYNLEDKQGAISDYSEAIRLKPD 498

Query: 482 VADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNF 516
             +++  RG      G  E A+ + ++ I + PN+
Sbjct: 499 SINAFNNRGNAKSDLGDKEGAIADYNEAIRIKPNY 533



 Score = 44.7 bits (104), Expect = 0.14,   Method: Compositional matrix adjust.
 Identities = 75/346 (21%), Positives = 129/346 (37%), Gaps = 61/346 (17%)

Query: 175 YQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQRHFVVHKMIVPGDRERVEQSLKEF 234
           YQ G      G Y +A+ +  + I L P+F  A   R    + +      E  + ++ ++
Sbjct: 436 YQSGNANSRVGNYRQAIADYSEAIRLKPDFADAFNNRGNAKYNL------EDKQGAISDY 489

Query: 235 RNFVDTHSNVVEACTLFAQVLVDQEDFDGAEEYFNRSIRVDPENASLYVHRAMLMLQARG 294
              +    + + A         D  D +GA   +N +IR+ P  A  Y  R      A G
Sbjct: 490 SEAIRLKPDSINAFNNRGNAKSDLGDKEGAIADYNEAIRIKPNYADAYNGRGNAK-SALG 548

Query: 295 NVDEAIKLIEKAISIDKSCMFAYETLGTIEVQRGRLEEAVKCFNKALPLARDEAELSHIY 354
           +    I    +AI I      AY   G      G  + A+  FN+A+ L    +    +Y
Sbjct: 549 DQQGPIADFNEAIRISPDHYKAYNNRGNARSALGDKQGAIADFNEAIRL---NSNFLQVY 605

Query: 355 SLRDAAIAQMKVCERYNIKKKVSPRSQNIT-KNEKLAIKQLRENNDIIIRPADKGGKTVV 413
             R  +   +   E+  I  ++    Q ++ KNEK+AI                      
Sbjct: 606 KNRSNSKKYLG-DEQGAIADRIEFIQQGVSSKNEKVAI---------------------- 642

Query: 414 MDKADYTQKMTSILNSNDYEIIPGDPTKTIEESEKYGNLENESGQ---KHAASDFTKAFA 470
              +DY             E++  DP+    +S+ Y      SG+   K    D+  A +
Sbjct: 643 ---SDYD------------ELMRLDPS---NKSKYY------SGRARIKLKLEDYQGAIS 678

Query: 471 DLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNF 516
           D +E  + +PN ADSY  R         Y+ A+ +  + I ++  +
Sbjct: 679 DYNEVIRAEPNNADSYSSRAFAKLRISNYQGAIDDCTQAIRISQGY 724


>gi|434388288|ref|YP_007098899.1| tetratricopeptide repeat protein [Chamaesiphon minutus PCC 6605]
 gi|428019278|gb|AFY95372.1| tetratricopeptide repeat protein [Chamaesiphon minutus PCC 6605]
          Length = 1675

 Score = 73.2 bits (178), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 90/419 (21%), Positives = 167/419 (39%), Gaps = 33/419 (7%)

Query: 128  TSVDPKIKVNAHIKRAVVHLHAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQY 187
            T  DP   + A  +R         D  +       A  +DPN   ++YQ+G +    G+ 
Sbjct: 1205 TESDPNYAL-AWYQRGQAQFQLHEDPAENLQSYQRALTLDPNHPAAWYQQGNLLFQLGRL 1263

Query: 188  EEALRNLDKTIALNP-NFHVARAQRHFVVHKMIVPGDRERVEQSLKEFRNFVDTHSNVVE 246
            E A+ + ++ + L P ++++     +       V G  +R + +++ +   +       +
Sbjct: 1264 EAAVESYERALQLKPEDYYIWNNHGN-------VLGSLKRYDCAIESYDKALALKPEFYQ 1316

Query: 247  ACTLFAQVLVDQEDFDGAEEYFNRSIRVDPENASLYVHRAMLMLQARGNVDEAIKLIEKA 306
            +     + L   + ++ A     RS+ + P NA ++  R M  LQ  G   EA+   E++
Sbjct: 1317 SWHNRGKALFHLKRYEEAAAAHERSLEIHPHNAQIWNGRGM-ALQHIGCWQEALACYERS 1375

Query: 307  ISIDKSCMFAYETLGTIEVQRGRLEEAVKCFNKALPLARDEAELSH---IYSLR----DA 359
            I IDK     +   GT      + E+A+ C++    L  DE +  H   I SL     DA
Sbjct: 1376 IEIDKLDPQVWLNRGTALFHLHKYEDAIACYDNCAILNPDELQAYHYRGIASLELGRWDA 1435

Query: 360  AIAQMKVC--------------ERYNIKKKVSPRSQNITKNEKLAIKQLRENNDIIIRPA 405
            A+A                      ++    SP + +   +   A+ QL  N +  +   
Sbjct: 1436 AVASFDRALTLSPALDEPEDRVRSQSVPVGKSPLTASTWNSRGTALFQL-GNLEGALHSY 1494

Query: 406  DKGGKTVVMDKADYTQKMTSILNSNDY-EIIPGDPTKTIEESEKYGNLENESGQKHAASD 464
             +  K    D   +T +  + LN   Y E +    T    ++        ++  + A   
Sbjct: 1495 RQATKVAPEDPLGWTNQGATHLNLQQYAEALQCYQTSLKIDANDAATWYKQAISQQALGR 1554

Query: 465  FTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQR 523
               A   L +A ++DP    + Y+RG IY L  ++E AL + + T+ L+P+   A   R
Sbjct: 1555 LDAAIISLTKAVEIDPQFILARYRRGNIYLLQREFEAALTDYEVTLNLDPDRAAAWNSR 1613



 Score = 70.9 bits (172), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 87/403 (21%), Positives = 165/403 (40%), Gaps = 52/403 (12%)

Query: 119 EDLTQLVEDTSVDPKIKVNAHIKRAVVHLHAASDFTKAFADLDEAEKVDPNVADSYYQRG 178
           E LT   + T++ PK   +A   R     H    +  A     +A +++P+++D++   G
Sbjct: 414 EALTCYTQATTLAPK-DASAWNDRGKAMFHLGR-YEHALDCYRKATQLEPSLSDAWNNLG 471

Query: 179 QIYCLFGQYEEALRNLDKTIALNPNFHVA-----RAQRHFVVHKMIVPGDRERVEQSLKE 233
           +     G++E A+ + ++   L P F+ A      AQ H            +R E ++  
Sbjct: 472 KTQFKLGKFETAISSYEQATRLYPEFYTAWNNLGVAQFHL-----------QRYEAAIAS 520

Query: 234 FRNFVDTHSNVVEACTLFAQVLVDQEDFDGAEEYFNRSIRVDPENASLYVHRAMLMLQAR 293
           +   +       +A             +D A   ++R++++ P+    + +   ++    
Sbjct: 521 YERTLQIQPQFHQAWYNKGMAQFHLSQYDRALASYDRTLKLKPDYYQAWNNLGFVLFHL- 579

Query: 294 GNVDEAIKLIEKAISIDKSCMFAYETLGTIEVQRGRLEEAVKCFNKALPLARDEAELSHI 353
           G  +EAI      + ++     A+   G     +GR  EA++ ++KAL    ++  L H 
Sbjct: 580 GRYEEAISSYNHTLKLNPEFYPAWYNHGMTLAHQGRDAEAIESYDKALGFQPNDPYLWHS 639

Query: 354 YSLRDAAIAQMKVCERYNIKKKVSPRSQNITKNEKLAIKQLRENNDIIIRPADKGGKTVV 413
              R  A+A++   ER+        RS +I          L EN +      D+G     
Sbjct: 640 ---RGRALAKL---ERHAEALTCFDRSIDI----------LPENYEPWY---DRGQSLAA 680

Query: 414 MDKADYTQKMTSILNSNDYEIIPGDPTKTIEESEKYGNLENESGQKHAASDFTKAFADLD 473
           + +  YT  + S       ++ P DP    E    YG ++          ++T A    D
Sbjct: 681 LGR--YTTALESY--DRTLQLRPKDP----EIWHSYGIVQG------LRQEYTAALESYD 726

Query: 474 EAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNF 516
            A  ++PN   S+Y+RG      G++E A+ N D+ IA+ P+F
Sbjct: 727 RALAINPNFYQSWYERGNALAELGRHEYAITNYDRAIAILPSF 769



 Score = 60.8 bits (146), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 49/232 (21%), Positives = 106/232 (45%), Gaps = 12/232 (5%)

Query: 115 TKAIEDLTQLVEDTSVDPKIKVNAHIKRAVVHLHAASDFTKAFADLDEAEKVDPNVADSY 174
           T A+E   + ++    DP+I  +  I + +       ++T A    D A  ++PN   S+
Sbjct: 685 TTALESYDRTLQLRPKDPEIWHSYGIVQGL-----RQEYTAALESYDRALAINPNFYQSW 739

Query: 175 YQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQRHFVVHKMIVPGDRERVEQSLKEF 234
           Y+RG      G++E A+ N D+ IA+ P+F  A   +   + K+      +R  +++  +
Sbjct: 740 YERGNALAELGRHEYAITNYDRAIAILPSFAPASQGKGQSLFKL------QRYAEAIASY 793

Query: 235 RNFVDTHSNVVEACTLFAQVLVDQEDFDGAEEYFNRSIRVDPENASLYVHRAMLMLQARG 294
              + T  +  +            E +D A   + ++++++   A ++  +   +L+ + 
Sbjct: 794 DLALTTAPDSFDCWCQRGYAFWHLESWDEALYSYQQALKLNASAAIVWHFQGKTLLKLQ- 852

Query: 295 NVDEAIKLIEKAISIDKSCMFAYETLGTIEVQRGRLEEAVKCFNKALPLARD 346
              EA+ + E+AI ++     ++  LG      GR E+A+  + +A+ L  D
Sbjct: 853 RYAEALTVYERAIELNSEDYHSWNDLGLTFAHLGRSEDAIDSYRQAIELQPD 904



 Score = 54.7 bits (130), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 75/386 (19%), Positives = 149/386 (38%), Gaps = 45/386 (11%)

Query: 149  AASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFH--- 205
            A  D+  A     +A ++DP+  + + Q GQI    G Y  A+ +L     + P      
Sbjct: 1088 AQGDWETALVACCQAIELDPDNPEIWTQHGQISIELGNYNTAVASLQTATGIAPESARSW 1147

Query: 206  --VARAQRHFVVHKMIVPGDRERVEQSLKEFRNFVDTHSNVVEACTLFAQVLVDQEDFDG 263
              + +A+ H           R     +L  +R  ++   +  E       +L   E ++ 
Sbjct: 1148 ALLGKAEYH-----------RGEFVAALAAYRQALELEPHRAETWYDRGYLLGQLERWED 1196

Query: 264  AEEYFNRSIRVDPENASLYVHRAMLMLQARGNVDEAIKLIEKAISIDKSCMFAYETLGTI 323
            A   ++R+   DP  A  +  R     Q   +  E ++  ++A+++D +   A+   G +
Sbjct: 1197 ALISYDRATESDPNYALAWYQRGQAQFQLHEDPAENLQSYQRALTLDPNHPAAWYQQGNL 1256

Query: 324  EVQRGRLEEAVKCFNKALPLARDEAELSHIYSLRDAAIAQMK----VCERYNIKKKVSPR 379
              Q GRLE AV+ + +AL L   + E  +I++     +  +K      E Y+    + P 
Sbjct: 1257 LFQLGRLEAAVESYERALQL---KPEDYYIWNNHGNVLGSLKRYDCAIESYDKALALKPE 1313

Query: 380  SQNITKNEKLAIKQLRENND--------IIIRPADK---GGKTVVMDKADYTQKMTSILN 428
                  N   A+  L+   +        + I P +     G+ + +      Q+  +   
Sbjct: 1314 FYQSWHNRGKALFHLKRYEEAAAAHERSLEIHPHNAQIWNGRGMALQHIGCWQEALACYE 1373

Query: 429  SNDYEIIPGDPTKTIEESEKYGNLENESGQKHAASDFTKAFADLDEAEKVDPNVADSYYQ 488
             +  EI   DP   +       +L            +  A A  D    ++P+   +Y+ 
Sbjct: 1374 RS-IEIDKLDPQVWLNRGTALFHLHK----------YEDAIACYDNCAILNPDELQAYHY 1422

Query: 489  RGQIYCLFGQYEEALRNLDKTIALNP 514
            RG      G+++ A+ + D+ + L+P
Sbjct: 1423 RGIASLELGRWDAAVASFDRALTLSP 1448



 Score = 53.9 bits (128), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 41/188 (21%), Positives = 89/188 (47%), Gaps = 7/188 (3%)

Query: 156 AFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQRHFVV 215
           A A  ++  ++ P+  +++   G +    G++EEAL + D+ + L P    A A R +V+
Sbjct: 109 ALACYNKTIELQPHKQEAWANLGWVLVGLGRWEEALASYDRALELRPEDGEAWANRGWVL 168

Query: 216 HKMIVPGDRERVEQSLKEFRNFVDTHSNVVEACTLFAQVLVDQEDFDGAEEYFNRSIRVD 275
            ++         +Q+++     ++ +     A     + L +   +D A   ++R++ + 
Sbjct: 169 FQL------GYYQQAIENCECSIELNPEDRFAWYQKGRALFELGSYDRALAAYDRALEIS 222

Query: 276 PENASLYVHRAMLMLQARGNVDEAIKLIEKAISIDKSCMFAYETLGTIEVQRGRLEEAVK 335
           P+++    ++  L+    G V  A    E+++ ID S  FA+   G +  Q G++  A+ 
Sbjct: 223 PDDSLTLSNKGWLLFHI-GQVQAACGCYEQSLHIDPSDRFAWNNHGQVLFQLGQIRAAID 281

Query: 336 CFNKALPL 343
            + KAL L
Sbjct: 282 AYQKALEL 289



 Score = 53.5 bits (127), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 67/365 (18%), Positives = 149/365 (40%), Gaps = 14/365 (3%)

Query: 153 FTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQRH 212
           F  A +  ++A ++ P    ++   G       +YE A+ + ++T+ + P FH A   + 
Sbjct: 480 FETAISSYEQATRLYPEFYTAWNNLGVAQFHLQRYEAAIASYERTLQIQPQFHQAWYNKG 539

Query: 213 FVVHKMIVPGDRERVEQSLKEFRNFVDTHSNVVEACTLFAQVLVDQEDFDGAEEYFNRSI 272
                +       + +++L  +   +    +  +A      VL     ++ A   +N ++
Sbjct: 540 MAQFHL------SQYDRALASYDRTLKLKPDYYQAWNNLGFVLFHLGRYEEAISSYNHTL 593

Query: 273 RVDPENASLYVHRAMLMLQARGNVDEAIKLIEKAISIDKSCMFAYETLGTIEVQRGRLEE 332
           +++PE    + +  M  L  +G   EAI+  +KA+    +  + + + G    +  R  E
Sbjct: 594 KLNPEFYPAWYNHGM-TLAHQGRDAEAIESYDKALGFQPNDPYLWHSRGRALAKLERHAE 652

Query: 333 AVKCFNKALPLARDEAELSHIYSLRDAAIAQMKVC-ERYNIKKKVSPRSQNITKNEKLAI 391
           A+ CF++++ +  +  E  +      AA+ +     E Y+   ++ P+   I  +  + +
Sbjct: 653 ALTCFDRSIDILPENYEPWYDRGQSLAALGRYTTALESYDRTLQLRPKDPEIWHSYGI-V 711

Query: 392 KQLRENNDIIIRPADKGGKTVVMDKADYTQKMTSI--LNSNDYEIIPGDPTKTIEESEKY 449
           + LR+     +   D+           + ++  ++  L  ++Y I   D    I  S  +
Sbjct: 712 QGLRQEYTAALESYDRALAINPNFYQSWYERGNALAELGRHEYAITNYDRAIAILPS--F 769

Query: 450 GNLENESGQK-HAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDK 508
                  GQ       + +A A  D A    P+  D + QRG  +     ++EAL +  +
Sbjct: 770 APASQGKGQSLFKLQRYAEAIASYDLALTTAPDSFDCWCQRGYAFWHLESWDEALYSYQQ 829

Query: 509 TIALN 513
            + LN
Sbjct: 830 ALKLN 834



 Score = 48.1 bits (113), Expect = 0.012,   Method: Composition-based stats.
 Identities = 78/434 (17%), Positives = 163/434 (37%), Gaps = 72/434 (16%)

Query: 153 FTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPN--------- 203
           + +A  + + + +++P    ++YQ+G+     G Y+ AL   D+ + ++P+         
Sbjct: 174 YQQAIENCECSIELNPEDRFAWYQKGRALFELGSYDRALAAYDRALEISPDDSLTLSNKG 233

Query: 204 ---FHVARAQRHFVVHKM---IVPGDR------ERVEQSLKEFRNFVDTHSNVVEACTLF 251
              FH+ + Q     ++    I P DR       +V   L + R  +D +   +E  + F
Sbjct: 234 WLLFHIGQVQAACGCYEQSLHIDPSDRFAWNNHGQVLFQLGQIRAAIDAYQKALELDSQF 293

Query: 252 AQVL-------VDQEDFDGAEEYFNRSIRVDPE------------------NASLYVHRA 286
            Q          +Q+ F  A   +  +I + PE                   A+L  +  
Sbjct: 294 YQAWNNLGVAHFEQKSFQDALRCYRAAIELAPEFQAAWCNQGKVLFFLGDFEAALAAYTK 353

Query: 287 MLMLQAR---------------GNVDEAIKLIEKAISIDKSCMFAYETLGTIEVQRGRLE 331
           +  LQ                 G ++ A++  E    +       +   G + +   R +
Sbjct: 354 VTQLQPDFDRAWNYCGNILFHLGELEPALRRYEMVTKLQPQLAEGWSNRGNVLLLLDRPQ 413

Query: 332 EAVKCFNKALPLARDEAELSHIYSLRDAAIAQMKVCER----YNIKKKVSPRSQNITKNE 387
           EA+ C+ +A  LA  +A     ++ R  A+  +   E     Y    ++ P   +   N 
Sbjct: 414 EALTCYTQATTLAPKDAS---AWNDRGKAMFHLGRYEHALDCYRKATQLEPSLSDAWNN- 469

Query: 388 KLAIKQLRENN-DIIIRPADKGGKTVVMDKADYTQKMTSILNSNDYEIIPGDPTKTIE-E 445
            L   Q +    +  I   ++  +        +     +  +   YE       +T++ +
Sbjct: 470 -LGKTQFKLGKFETAISSYEQATRLYPEFYTAWNNLGVAQFHLQRYEAAIASYERTLQIQ 528

Query: 446 SEKYGNLENESGQKHAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRN 505
            + +    N+   +   S + +A A  D   K+ P+   ++   G +    G+YEEA+ +
Sbjct: 529 PQFHQAWYNKGMAQFHLSQYDRALASYDRTLKLKPDYYQAWNNLGFVLFHLGRYEEAISS 588

Query: 506 LDKTIALNPNFHVA 519
            + T+ LNP F+ A
Sbjct: 589 YNHTLKLNPEFYPA 602



 Score = 47.4 bits (111), Expect = 0.018,   Method: Composition-based stats.
 Identities = 72/401 (17%), Positives = 153/401 (38%), Gaps = 45/401 (11%)

Query: 152  DFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIAL-NPNFHVA--- 207
            + ++A    ++   + P+ A+++Y++G+      Q+E A+   ++   L NP++ +    
Sbjct: 955  ELSEAMFAYEQVTNLKPDRAEAWYRQGKALQALQQWERAVTCYERVTTLTNPSYDLCYSH 1014

Query: 208  --------RAQRHFVVHKMIVPGDRERVE------QSLKEFRNFVDTHSNVVEACTLFAQ 253
                    R Q     +++ +  ++   +      Q+L     + D +S    A +L  Q
Sbjct: 1015 GQVLTKLNRHQEALACYELALTLNKNAADAWYAKGQTLAALNRWEDANSCYERALSLDPQ 1074

Query: 254  ----------VLVDQEDFDGAEEYFNRSIRVDPENASLYVHRAMLMLQARGNVDEAIKLI 303
                      V   Q D++ A     ++I +DP+N  ++     + ++  GN + A+  +
Sbjct: 1075 NQSILYNQSRVQAAQGDWETALVACCQAIELDPDNPEIWTQHGQISIEL-GNYNTAVASL 1133

Query: 304  EKAISIDKSCMFAYETLGTIEVQRGRLEEAVKCFNKALPLARDEAE--------LSHIYS 355
            + A  I      ++  LG  E  RG    A+  + +AL L    AE        L  +  
Sbjct: 1134 QTATGIAPESARSWALLGKAEYHRGEFVAALAAYRQALELEPHRAETWYDRGYLLGQLER 1193

Query: 356  LRDAAIAQMKVCERYNIKKKVSPRSQNITKNEKLAIKQLRENNDIIIRPADKGGKTVVMD 415
              DA I+       Y+   +  P           A  QL E+    ++   +        
Sbjct: 1194 WEDALIS-------YDRATESDPNYALAWYQRGQAQFQLHEDPAENLQSYQRALTLDPNH 1246

Query: 416  KADYTQKMTSILNSNDYEIIPGDPTKTIE-ESEKYGNLENESGQKHAASDFTKAFADLDE 474
             A + Q+   +      E       + ++ + E Y    N      +   +  A    D+
Sbjct: 1247 PAAWYQQGNLLFQLGRLEAAVESYERALQLKPEDYYIWNNHGNVLGSLKRYDCAIESYDK 1306

Query: 475  AEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPN 515
            A  + P    S++ RG+      +YEEA    ++++ ++P+
Sbjct: 1307 ALALKPEFYQSWHNRGKALFHLKRYEEAAAAHERSLEIHPH 1347



 Score = 39.3 bits (90), Expect = 5.0,   Method: Composition-based stats.
 Identities = 63/326 (19%), Positives = 120/326 (36%), Gaps = 50/326 (15%)

Query: 202 PNFHVARAQRHFVVHKMIVPGDRERVEQSLKEFRNFVDTHSNVVEACTLFAQVLVDQEDF 261
           PN+ VA         +  +  D  +++ +L  +   ++   +  EA      VLV    +
Sbjct: 81  PNYPVATDDPEAWYRQGNLYRDARKLDVALACYNKTIELQPHKQEAWANLGWVLVGLGRW 140

Query: 262 DGAEEYFNRSIRVDPENASLYVHRAMLMLQARGNVDEAIKLIEKAISIDKSCMFAYETLG 321
           + A   ++R++ + PE+   + +R  ++ Q  G   +AI+  E +I ++    FA+   G
Sbjct: 141 EEALASYDRALELRPEDGEAWANRGWVLFQL-GYYQQAIENCECSIELNPEDRFAWYQKG 199

Query: 322 TIEVQRGRLEEAVKCFNKALPLARDEA--------ELSHIYSLRDAAIAQMKVCERYNIK 373
               + G  + A+  +++AL ++ D++         L HI  ++ A       C  Y   
Sbjct: 200 RALFELGSYDRALAAYDRALEISPDDSLTLSNKGWLLFHIGQVQAA-------CGCYEQS 252

Query: 374 KKVSPRSQNITKNEKLAIKQLRENNDIIIRPADKGGKTVVMDKADYTQKMTSILNSNDYE 433
             + P  +    N    + QL +     IR A            D  QK   +       
Sbjct: 253 LHIDPSDRFAWNNHGQVLFQLGQ-----IRAA-----------IDAYQKALEL------- 289

Query: 434 IIPGDPTKTIEESEKYGNLENESGQKHAASDFTKAFADLDEAEKVDPNVADSYYQRGQIY 493
                      +S+ Y    N          F  A      A ++ P    ++  +G++ 
Sbjct: 290 -----------DSQFYQAWNNLGVAHFEQKSFQDALRCYRAAIELAPEFQAAWCNQGKVL 338

Query: 494 CLFGQYEEALRNLDKTIALNPNFHVA 519
              G +E AL    K   L P+F  A
Sbjct: 339 FFLGDFEAALAAYTKVTQLQPDFDRA 364


>gi|21226280|ref|NP_632202.1| hypothetical protein MM_0178 [Methanosarcina mazei Go1]
 gi|20904523|gb|AAM29874.1| conserved protein [Methanosarcina mazei Go1]
          Length = 1711

 Score = 73.2 bits (178), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 91/434 (20%), Positives = 179/434 (41%), Gaps = 70/434 (16%)

Query: 127 DTSVDPKIKVNAHIKRAVVHLHAASDFTKAF-----------------ADLDEAEKV--- 166
           + +++ K  + A I +  + L A  DF K +                 +  +EAEK+   
Sbjct: 98  ENALEQKCLLLAKIGKKDLALEALEDFLKKYPANEAALYHKGILLSELSRYEEAEKIFSK 157

Query: 167 ----DPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQRHFVVHKMIVPG 222
               DP   ++++++G       +  EA++  ++ I ++P++  A   R F + K+    
Sbjct: 158 VLKLDPENREAWFRKGFALVQLLRLNEAIKAFEEAIKIDPSYFEAWNCRCFALMKL---- 213

Query: 223 DRERVEQSLKEFRNFVDTHSNVVEACTLFAQVLVDQEDFDGAEEYFNRSIRVDPENASLY 282
             E  E++L+ F + +  + +V +     A  L+  +++  A + F R   +DPEN   +
Sbjct: 214 --EVYEEALEAFDSMLRIYPDVKDIWYSRALALLKLQNYAEAVQSFARVTELDPENKDAW 271

Query: 283 VHRAMLMLQARGNVDEAIKLIEKAISIDKSCMFAYETLGTIEVQRGRLEEAVKCFNKALP 342
           + + +L+ +  G  +EA+  +EK +  D     A +  GT+    GR EEA+    K+L 
Sbjct: 272 LQQGLLLART-GKHEEALNALEKLLEYDPDFTEAQKLRGTVLAGLGRFEEALGPLEKSL- 329

Query: 343 LARDEAELSHIYSLRDAAIAQMKVCE----RYNIKKKVSPRSQNITKNEKLAIKQLRENN 398
               E E  +++  +   +      E     +    +++P ++    N   A+  L    
Sbjct: 330 --EKEPENYNLWLQKGLILLDTGKLEPAIDAFENAARLNPDNETCWMNMGFALYSLERYE 387

Query: 399 DII--------IRPADKGG---KTVVMDKADYTQKMTSILNSNDYEIIPGDPTKTIEESE 447
           + +        + P  + G   K +V+ K   T                G+  +  EE+ 
Sbjct: 388 EALEAFKEGLRLNPYLETGWNRKGIVLGKLGKT----------------GEALEAFEEAI 431

Query: 448 KY-----GNLENESGQKHAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEA 502
           K         +N      A+ +  KA     E  K++P   DS Y RG      G+ E A
Sbjct: 432 KLRPDFEDAWKNRGLLLFASEECEKAEEAFAEVLKINPEDIDSLYNRGISLLKLGRKETA 491

Query: 503 LRNLDKTIALNPNF 516
           L  L+K ++L P++
Sbjct: 492 LEYLEKVVSLRPDY 505



 Score = 59.3 bits (142), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 79/393 (20%), Positives = 176/393 (44%), Gaps = 38/393 (9%)

Query: 150 ASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARA 209
           A  + +A  + + A +++P  +++ Y +G +     +Y+ AL   D     NP    A  
Sbjct: 43  AERYEEALENFERALEINPKDSEACYAKGLVLAKLEKYDSALECFDSLTRENPRNENALE 102

Query: 210 QRHFVVHKMIVPGDRERVEQSLKEF-RNFVDTHSNVVEACTLFAQVLVDQEDFDGAEEYF 268
           Q+  ++ K+   G ++   ++L++F + +    + +     L +++      ++ AE+ F
Sbjct: 103 QKCLLLAKI---GKKDLALEALEDFLKKYPANEAALYHKGILLSEL----SRYEEAEKIF 155

Query: 269 NRSIRVDPENASLYVHRAMLMLQARGNVDEAIKLIEKAISIDKSCMFAYETLGTIEVQRG 328
           ++ +++DPEN   +  +   ++Q    ++EAIK  E+AI ID S   A+       ++  
Sbjct: 156 SKVLKLDPENREAWFRKGFALVQLL-RLNEAIKAFEEAIKIDPSYFEAWNCRCFALMKLE 214

Query: 329 RLEEAVKCFNKALPLARDEAELSHIYSLRDAAIAQMK----VCERYNIKKKVSPRSQNIT 384
             EEA++ F+  L +  D   +  I+  R  A+ +++      + +    ++ P +++  
Sbjct: 215 VYEEALEAFDSMLRIYPD---VKDIWYSRALALLKLQNYAEAVQSFARVTELDPENKDAW 271

Query: 385 KNEKLAIKQLRENNDIIIRPADKGGKTVVMDKADYT--QKM--TSILNSNDYEIIPGDPT 440
             + L + +  ++ + +        + ++    D+T  QK+  T +     +E   G   
Sbjct: 272 LQQGLLLARTGKHEEAL-----NALEKLLEYDPDFTEAQKLRGTVLAGLGRFEEALGPLE 326

Query: 441 KTIE-ESEKY------GNLENESGQKHAASDFTKAFADLDEAEKVDPNVADSYYQRGQIY 493
           K++E E E Y      G +  ++G+   A D   AF   + A +++P+    +   G   
Sbjct: 327 KSLEKEPENYNLWLQKGLILLDTGKLEPAID---AF---ENAARLNPDNETCWMNMGFAL 380

Query: 494 CLFGQYEEALRNLDKTIALNPNFHVARAQRHFV 526
               +YEEAL    + + LNP       ++  V
Sbjct: 381 YSLERYEEALEAFKEGLRLNPYLETGWNRKGIV 413



 Score = 57.8 bits (138), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 83/393 (21%), Positives = 165/393 (41%), Gaps = 66/393 (16%)

Query: 156 AFADLDEAE----------KVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFH 205
           AFA++D  E          ++ P  A ++   G +     +YEEAL N ++ + +NP   
Sbjct: 5   AFAEIDRTEASILCFEKALELMPEYAAAWCAMGTVAGKAERYEEALENFERALEINPKDS 64

Query: 206 VARAQRHFVVHKMIVPGDRERVEQSLKEFRNFV---DTHSNVVE-ACTLFAQVLVDQEDF 261
            A   +  V+ K+      E+ + +L+ F +       + N +E  C L A++       
Sbjct: 65  EACYAKGLVLAKL------EKYDSALECFDSLTRENPRNENALEQKCLLLAKIGKKDLAL 118

Query: 262 DGAEEYFNRSIRVDPENASLYVHRAMLMLQARGNVDEAIKLIEKAISIDKSCMFAYETLG 321
           +  E++  +     P N +   H+ +L L      +EA K+  K + +D     A+   G
Sbjct: 119 EALEDFLKKY----PANEAALYHKGIL-LSELSRYEEAEKIFSKVLKLDPENREAWFRKG 173

Query: 322 TIEVQRGRLEEAVKCFNKALPLARDEAELSHIYSLRDAAIAQMKV----CERYNIKKKVS 377
              VQ  RL EA+K F +A+ +   +      ++ R  A+ +++V     E ++   ++ 
Sbjct: 174 FALVQLLRLNEAIKAFEEAIKI---DPSYFEAWNCRCFALMKLEVYEEALEAFDSMLRIY 230

Query: 378 PRSQNITKNEKLAIKQLRENNDIIIRPADKGGKTVVMDKADYTQKMTSILNSNDYEIIPG 437
           P  ++I  +  LA+ +L+                      +Y + + S       E+ P 
Sbjct: 231 PDVKDIWYSRALALLKLQ----------------------NYAEAVQSFARVT--ELDPE 266

Query: 438 DPTKTIEESEKYGNLENESGQKHAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFG 497
           +    +++    G L   +G KH      +A   L++  + DP+  ++   RG +    G
Sbjct: 267 NKDAWLQQ----GLLLARTG-KH-----EEALNALEKLLEYDPDFTEAQKLRGTVLAGLG 316

Query: 498 QYEEALRNLDKTIALNPNFHVARAQRHFVWTST 530
           ++EEAL  L+K++   P  +    Q+  +   T
Sbjct: 317 RFEEALGPLEKSLEKEPENYNLWLQKGLILLDT 349



 Score = 55.1 bits (131), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 98/458 (21%), Positives = 183/458 (39%), Gaps = 67/458 (14%)

Query: 70  RAFEHEDYLTAIRHCTEEIESTSSNHTKALARLLRATVYIFTSQSTKAIEDLTQLVEDTS 129
           R  +HE+ L A+    E++     + T+A  + LR TV     +  +A+  L + +E   
Sbjct: 280 RTGKHEEALNAL----EKLLEYDPDFTEA--QKLRGTVLAGLGRFEEALGPLEKSLEK-- 331

Query: 130 VDPKIKVNAHIKRAVVHLHAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEE 189
            +P+   N  +++ ++ L        A    + A +++P+    +   G       +YEE
Sbjct: 332 -EPE-NYNLWLQKGLILLDTGK-LEPAIDAFENAARLNPDNETCWMNMGFALYSLERYEE 388

Query: 190 ALRNLDKTIALNPNFHVARAQRHFVVHKMIVPGDR-ERVEQSLKEFRNFVDTHSNVVEAC 248
           AL    + + LNP       ++  V+ K+   G+  E  E+++K   +F D   N     
Sbjct: 389 ALEAFKEGLRLNPYLETGWNRKGIVLGKLGKTGEALEAFEEAIKLRPDFEDAWKN--RGL 446

Query: 249 TLFAQVLVDQEDFDGAEEYFNRSIRVDPENASLYVHRAMLMLQARGNVDEAIKLIEKAIS 308
            LFA      E+ + AEE F   ++++PE+     +R + +L+  G  + A++ +EK +S
Sbjct: 447 LLFAS-----EECEKAEEAFAEVLKINPEDIDSLYNRGISLLKL-GRKETALEYLEKVVS 500

Query: 309 IDKSCMFAYETLGTIEVQRGRLEEAVKCFNKALPLARDEAELSHIYSLRDAAIAQ----- 363
           +         +LG    + G  E+A++ F K   LA +      I   R     +     
Sbjct: 501 LRPDYPDLSYSLGVALTELGEYEKALETFEK---LASENPYDLEIQCRRGKLAMEVGNYE 557

Query: 364 --MKVCERYNIKKKVSPRSQNITKNEKLAIKQLRENNDIIIRPADKGGKTVVMDKADYTQ 421
             ++  ER   +K   P S+     + LA+ +L EN +  ++  D     V    ADY  
Sbjct: 558 TALQAFERILTEK---PASREAWYRKGLALLKL-ENFEEAVKAFD----AVATKDADY-- 607

Query: 422 KMTSILNSNDYEIIPGDPTKTIEESEKYGNLENESGQKHAASDFTKAFADLDEAEKVDPN 481
                    D  ++ G     ++E                      A    +   +  P+
Sbjct: 608 --------EDAGVLKGFAQMKLKEC-------------------ASALETFERVLEKKPD 640

Query: 482 VADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVA 519
              ++Y RG I     + EEA +  +    LNP  + A
Sbjct: 641 SDTAWYYRGMILYTLQRQEEAAKAFESASRLNPGLYTA 678



 Score = 48.5 bits (114), Expect = 0.010,   Method: Compositional matrix adjust.
 Identities = 52/256 (20%), Positives = 103/256 (40%), Gaps = 7/256 (2%)

Query: 104  RATVYIFTSQSTKAIEDLTQLVEDTSVDPKIKVNAHIKR-AVVHLHAASDFTKAFADLDE 162
            +  V+I      KA+E    +   T  DP      +    +   L    + ++AF    E
Sbjct: 801  KGLVFIRQEAYEKAVEAFKGI---TDQDPNFAEGWYFTGLSCSKLGRYEEASEAFKKALE 857

Query: 163  AEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQRH--FVVHKMIV 220
                  +  D  YQ G      G++EEAL+  +K     P+        +   +  K + 
Sbjct: 858  INSALRDTHDICYQLGISNFELGKFEEALKAFEKAFKTTPDREQITETTYTDLIYMKSLS 917

Query: 221  PGDRERVEQSLKEFRNFVDTHSNVVEACTLFAQVLVDQEDFDGAEEYFNRSIRVDPENAS 280
                 R +++   F+  +   S+  EA    +     QE ++ A E F + +   PE  +
Sbjct: 918  LLRLGRYKEAEVGFKEVIFRDSDNAEALAHLSTACFKQEHYEEALEIFEKVLSQTPERKT 977

Query: 281  LYVHRAMLMLQARGNVDEAIKLIEKAISIDKSCMFAYETLGTIEVQRGRLEEAVKCFNKA 340
            + + R  + L+A G + +++ + +  + +   C +A E  G    + GR  EA + F +A
Sbjct: 978  V-LFRKGVALKALGKIQDSLDIFDLVLKLKPDCSYALEQRGYALFELGRYGEAAEAFKEA 1036

Query: 341  LPLARDEAELSHIYSL 356
            L    ++  + ++  L
Sbjct: 1037 LEYCPNKTYMQYLKGL 1052



 Score = 42.0 bits (97), Expect = 0.76,   Method: Compositional matrix adjust.
 Identities = 43/199 (21%), Positives = 86/199 (43%), Gaps = 11/199 (5%)

Query: 145 VHLHAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNF 204
           V L    ++ KA    ++    +P   +   +RG++    G YE AL+  ++ +   P  
Sbjct: 514 VALTELGEYEKALETFEKLASENPYDLEIQCRRGKLAMEVGNYETALQAFERILTEKPAS 573

Query: 205 HVARAQRHFVVHKMIVPGDRERVEQSLKEFRNFVDTHSNVVEACTL--FAQVLVDQEDFD 262
             A  ++   + K+      E  E+++K F       ++  +A  L  FAQ+ +  ++  
Sbjct: 574 REAWYRKGLALLKL------ENFEEAVKAFDAVATKDADYEDAGVLKGFAQMKL--KECA 625

Query: 263 GAEEYFNRSIRVDPENASLYVHRAMLMLQARGNVDEAIKLIEKAISIDKSCMFAYETLGT 322
            A E F R +   P++ + + +R M++   +   +EA K  E A  ++     A+E    
Sbjct: 626 SALETFERVLEKKPDSDTAWYYRGMILYTLQRQ-EEAAKAFESASRLNPGLYTAFEYRAK 684

Query: 323 IEVQRGRLEEAVKCFNKAL 341
              + G+ E A + F   L
Sbjct: 685 CLFETGQYEAAFEAFEAVL 703



 Score = 41.2 bits (95), Expect = 1.6,   Method: Compositional matrix adjust.
 Identities = 84/430 (19%), Positives = 173/430 (40%), Gaps = 41/430 (9%)

Query: 105  ATVYIFTSQSTKAIEDLTQLVEDTSVDPKIKVNAHIKRAVVHLHAASDFTKAFADLDEAE 164
            A+  I   +  +A+  L +L  + S   +   +  I  A++ L    +  + F+DL E  
Sbjct: 1179 ASALIELGKPEEALLPLEKLAREGSASKETLYDRGI--ALLELGRQEEAFEIFSDLIE-- 1234

Query: 165  KVDPNVADSYYQRGQIYCLFGQ--YEEALRNLDKTIALNPNFHVARAQRHFVVHKMIVPG 222
             + P+   ++Y +G +  LF Q  YEEAL+ L + +       +   +    + K+ +  
Sbjct: 1235 -IYPDFKKAWYGKGLV--LFSQEHYEEALKALKQAVPDGEESKIGEPELEDALTKIGLSQ 1291

Query: 223  DRE-RVEQSLKEFRNFVDTHSNVVEACTLFAQVLVDQEDFDGAEEYFNRSIRVDPENASL 281
             +  + E +   F   ++ +    +   L   V+   +  + A E FNR++ + P+  + 
Sbjct: 1292 LKTGKYEDACDTFEKVLEKNPMAADIWYLSGLVMRGLDQNEDAVEAFNRALEIKPDLRAA 1351

Query: 282  YVHRAMLML------QARGNVDEAIK-LIEKAISIDKSCMFAYETLGTIEVQRGRLEEAV 334
               + + +L      +AR      ++   E A  +    + +++TL          E+A 
Sbjct: 1352 QEQKGLALLSLCRYEEARDAFSSVLEESPENADVLYNRAVASFKTLN--------FEDAA 1403

Query: 335  KCFNKALPLARDEAELSHIYSLRDAAIAQMKVCER----YNIKKKVSPRSQNITKNEKLA 390
            K   K L  A D  + +    +   A  +++  ER     ++  +  P  +    N  L 
Sbjct: 1404 KDLEKVLLFAPDSPDYTEACYMLGIASIELQDYERALQALDMVLEWEPEHEEALYNMALV 1463

Query: 391  IKQLRENNDIIIRPADKGGKTVVMDKADYTQKMTSILNSNDYEIIPGDPTKTIEESEKYG 450
            +  L E  +   R  ++  +T   D          +L  ++ +    +  K  E++  + 
Sbjct: 1464 LFNLEEYEEAA-RTFEQLLETSPEDPESLNYLGLCLLELDNLK----EALKAFEKAALF- 1517

Query: 451  NLENESGQKHAASDFTK------AFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALR 504
            N +NE    +AA+   K      +    D   ++ P+  D    +G I+C+  QY EALR
Sbjct: 1518 NPKNEEALYNAATTLIKLNRAQESLGYFDRILEISPDNLDVLNYKGVIFCMLDQYREALR 1577

Query: 505  NLDKTIALNP 514
              D  +  +P
Sbjct: 1578 AFDGVLKRDP 1587


>gi|428213339|ref|YP_007086483.1| hypothetical protein Oscil6304_2964 [Oscillatoria acuminata PCC
           6304]
 gi|428001720|gb|AFY82563.1| TPR repeat-containing protein [Oscillatoria acuminata PCC 6304]
          Length = 580

 Score = 73.2 bits (178), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 79/379 (20%), Positives = 162/379 (42%), Gaps = 45/379 (11%)

Query: 147 LHAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHV 206
           L+   ++  A A  D+A +  P +  +  +RG       +YEEA+   D  I +NP+ + 
Sbjct: 52  LYEQKNYAGAVAFYDKAIQKKPTMHRALLKRGTALMNLHRYEEAIAGYDGAIQVNPDDYW 111

Query: 207 ARAQRHFVVHKMIVPGDRERVEQSLKEFRNFVDTHSNVVEACTLFAQVLVDQEDFDGAEE 266
               R   +  +       R +++L  F   +  +SN  EA     + L++ +    A  
Sbjct: 112 GWTFRGRCLFHL------NRYQEALASFDQSIQINSNQYEAWYFRGRSLLELQQSKAAVT 165

Query: 267 YFNRSIRVDPENASLYVHRAMLMLQARGNVDEAIKLIEKAISIDKSCMFAYETLGTIEVQ 326
            FN+ +++ P+ +S + +R +  L +    D A+  +E+A+++D     A+   G    +
Sbjct: 166 AFNKVVKLKPKLSSGWYYRGLTFL-SLDRPDLALTSLEQAVALDPQNPAAWFNQGVALDR 224

Query: 327 RGRLEEAVKCFNKALPLARDEAELSHIYSLRDAAIAQMKVCERYNIKKKVSPRSQNITKN 386
           + R  EAV  +++ L L  + A      S  +  +   K+ +RY         +  +   
Sbjct: 225 QQRYAEAVAAYDRTLQLVPENAA-----SWFNRGVTLEKL-QRY---------TDAVASF 269

Query: 387 EKLAIKQLRENNDIIIRPADKGGKTVVMDKADYTQKMTSILNSND--YEIIPGDPTKTIE 444
           ++  + Q   +N ++              +A   Q + + +   D   E+ P  P   + 
Sbjct: 270 DR--VIQFAPSNPLV---------WFYKGRALKHQWVEAAIGCFDKAIELHPNWPEAWMN 318

Query: 445 ESEKYGNLENESGQKHAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALR 504
                G   +++GQ      +  A +  D+A K++PN++ ++  RG      G+Y++A++
Sbjct: 319 R----GIALSDAGQ------YEVALSSFDQATKINPNLSTAWLGRGMALYGLGRYKDAIQ 368

Query: 505 NLDKTIALNPNFHVARAQR 523
            L   I + PNF  A   R
Sbjct: 369 ALSNAIQIQPNFPEAWYHR 387



 Score = 62.4 bits (150), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 46/207 (22%), Positives = 97/207 (46%), Gaps = 11/207 (5%)

Query: 138 AHIKRAVVHLHAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKT 197
           A + R +  L  A  +  A +  D+A K++PN++ ++  RG      G+Y++A++ L   
Sbjct: 315 AWMNRGIA-LSDAGQYEVALSSFDQATKINPNLSTAWLGRGMALYGLGRYKDAIQALSNA 373

Query: 198 IALNPNFHVARAQRHFVVHKMIVPGDRERVEQSLKEFRNFVDTHSNVV---EACTLFAQV 254
           I + PNF  A   R   + ++      +R E++L  +   V      +    +    ++V
Sbjct: 374 IQIQPNFPEAWYHRGLALEQL------QRYEEALTAYEKVVQVTQEPMFRYRSWVKRSEV 427

Query: 255 LVDQEDFDGAEEYFNRSIRVDPENASLYVHRAMLMLQARGNVDEAIKLIEKAISIDKSCM 314
           L   E +  A + F + + V P +A  ++ R  L+  A+  +D AI   ++AI+I  +  
Sbjct: 428 LEKLERYPEALDAFAKVLEVKPNDAQAWMKRGDLLSLAQRYID-AIVAYDQAIAIWPNHY 486

Query: 315 FAYETLGTIEVQRGRLEEAVKCFNKAL 341
             +   G +  + G+  +A+  ++  +
Sbjct: 487 DPWMKRGRVLSKIGQYPQAIAAYDTVI 513



 Score = 60.1 bits (144), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 54/226 (23%), Positives = 98/226 (43%), Gaps = 20/226 (8%)

Query: 121 LTQLVEDTSVDPKIKVNAHIKRAVVHLHAASDFTKAFADLDEAEKVDPNVADSYYQRGQI 180
           LT L +  ++DP+    A   + V  L     + +A A  D   ++ P  A S++ RG  
Sbjct: 198 LTSLEQAVALDPQ-NPAAWFNQGVA-LDRQQRYAEAVAAYDRTLQLVPENAASWFNRGVT 255

Query: 181 YCLFGQYEEALRNLDKTIALNPN-----FHVARAQRHFVVHKMIVPGDRERVEQSLKEFR 235
                +Y +A+ + D+ I   P+     F+  RA +H            + VE ++  F 
Sbjct: 256 LEKLQRYTDAVASFDRVIQFAPSNPLVWFYKGRALKH------------QWVEAAIGCFD 303

Query: 236 NFVDTHSNVVEACTLFAQVLVDQEDFDGAEEYFNRSIRVDPENASLYVHRAMLMLQARGN 295
             ++ H N  EA       L D   ++ A   F+++ +++P  ++ ++ R M  L   G 
Sbjct: 304 KAIELHPNWPEAWMNRGIALSDAGQYEVALSSFDQATKINPNLSTAWLGRGM-ALYGLGR 362

Query: 296 VDEAIKLIEKAISIDKSCMFAYETLGTIEVQRGRLEEAVKCFNKAL 341
             +AI+ +  AI I  +   A+   G    Q  R EEA+  + K +
Sbjct: 363 YKDAIQALSNAIQIQPNFPEAWYHRGLALEQLQRYEEALTAYEKVV 408



 Score = 47.4 bits (111), Expect = 0.019,   Method: Compositional matrix adjust.
 Identities = 50/242 (20%), Positives = 93/242 (38%), Gaps = 58/242 (23%)

Query: 115 TKAIEDLTQLVEDTSVDPKIKVNAHIKRAVVHLHAASDFTKAFADLDEAEKVDPNVADSY 174
           T A+    ++++    +P +    +  RA+ H    +    A    D+A ++ PN  +++
Sbjct: 263 TDAVASFDRVIQFAPSNPLVWF--YKGRALKHQWVEA----AIGCFDKAIELHPNWPEAW 316

Query: 175 YQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQRHFVVHKMIVPGDRERVEQSLKEF 234
             RG      GQYE AL + D+   +NPN   A   R   ++              L  +
Sbjct: 317 MNRGIALSDAGQYEVALSSFDQATKINPNLSTAWLGRGMALY-------------GLGRY 363

Query: 235 RNFVDTHSNVVEACTLFAQVLVDQEDFDGAEEYFNRSIRVDPENASLYVHRAMLMLQARG 294
           ++ +   SN                           +I++ P     + HR + + Q + 
Sbjct: 364 KDAIQALSN---------------------------AIQIQPNFPEAWYHRGLALEQLQ- 395

Query: 295 NVDEAIKLIEKAISIDKSCMFAY-------ETLGTIEVQRGRLEEAVKCFNKALPLARDE 347
             +EA+   EK + + +  MF Y       E L  +E    R  EA+  F K L +  ++
Sbjct: 396 RYEEALTAYEKVVQVTQEPMFRYRSWVKRSEVLEKLE----RYPEALDAFAKVLEVKPND 451

Query: 348 AE 349
           A+
Sbjct: 452 AQ 453


>gi|333987251|ref|YP_004519858.1| hypothetical protein MSWAN_1036 [Methanobacterium sp. SWAN-1]
 gi|333825395|gb|AEG18057.1| Tetratricopeptide TPR_2 repeat-containing protein [Methanobacterium
           sp. SWAN-1]
          Length = 228

 Score = 73.2 bits (178), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 50/184 (27%), Positives = 95/184 (51%), Gaps = 7/184 (3%)

Query: 160 LDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQRHFVVHKMI 219
           LDE  K+DPN  + ++ +  I+ L     EA+  LD  + +NP    A  ++  +++K+ 
Sbjct: 39  LDEVLKLDPNNDEVWFLKSIIFGLMDNLNEAVNCLDHVVEINPKNIDAWQRKGKLLNKL- 97

Query: 220 VPGDRERVEQSLKEFRNFVDTHSNVVEACTLFAQVLVDQEDFDGAEEYFNRSIRVDPENA 279
                 +  ++LK     +    N  +A +  A+ L   + +  A +Y NRS+ ++PE  
Sbjct: 98  -----GKYHEALKSSEEALKLDPNNYKALSNKARSLSRLKKYHEAFDYCNRSLELNPEYF 152

Query: 280 SLYVHRAMLMLQARGNVDEAIKLIEKAISIDKSCMFAYETLGTIEVQRGRLEEAVKCFNK 339
             + ++A+++LQ   + DEA++  EK + ++ +   A+   G      GR EEA+KC+ +
Sbjct: 153 KAWCYKAIILLQLEKS-DEALQCFEKVLILNPNNAHAWSGKGLALEMLGRTEEALKCYKR 211

Query: 340 ALPL 343
           AL L
Sbjct: 212 ALEL 215



 Score = 43.1 bits (100), Expect = 0.38,   Method: Compositional matrix adjust.
 Identities = 45/239 (18%), Positives = 95/239 (39%), Gaps = 48/239 (20%)

Query: 72  FEHEDYLTAIRHCTEEIESTSSNHTKALARLLRATVYIFTSQSTKAIEDLTQLVEDTSVD 131
           F  +D       C +E+     N+ +     L++ ++       +A+  L  +VE   ++
Sbjct: 26  FYRQDKFEESNQCLDEVLKLDPNNDEVW--FLKSIIFGLMDNLNEAVNCLDHVVE---IN 80

Query: 132 PKIKVNAHIKRAVVHLHAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEAL 191
           PK  ++A  ++  + L+    + +A    +EA K+DPN   +   + +      +Y EA 
Sbjct: 81  PK-NIDAWQRKGKL-LNKLGKYHEALKSSEEALKLDPNNYKALSNKARSLSRLKKYHEAF 138

Query: 192 RNLDKTIALNPNFHVARAQRHFVVHKMIVPGDRERVEQSLKEFRNFVDTHSNVVEACTLF 251
              ++++ LNP +  A   +                                        
Sbjct: 139 DYCNRSLELNPEYFKAWCYK---------------------------------------- 158

Query: 252 AQVLVDQEDFDGAEEYFNRSIRVDPENASLYVHRAMLMLQARGNVDEAIKLIEKAISID 310
           A +L+  E  D A + F + + ++P NA  +  +  L L+  G  +EA+K  ++A+ +D
Sbjct: 159 AIILLQLEKSDEALQCFEKVLILNPNNAHAWSGKG-LALEMLGRTEEALKCYKRALELD 216


>gi|91204151|emb|CAJ71804.1| conserved hypothetical tpr repeat protein [Candidatus Kuenenia
           stuttgartiensis]
          Length = 817

 Score = 73.2 bits (178), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 96/373 (25%), Positives = 161/373 (43%), Gaps = 65/373 (17%)

Query: 156 AFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNP-NFHVARAQRHFV 214
           A A  ++A + +P  AD+Y   G IY    QY  A++  +K I  NP +F   R   +  
Sbjct: 472 AIAAYEKAIQSNPYHADAYNNIGNIYKKKKQYPAAVKMYEKAIRCNPFDF---RYHSNLG 528

Query: 215 VHKMIVPGDRERVEQSLKEFRNFVD---THSNVVEACTLFAQVLVDQEDFDGAEEYFNRS 271
           +  +     RE V+  LK  +   D   TH+++         VL +  DFDGAEE +  +
Sbjct: 529 LIYLETKNYRESVDAFLKALKIAPDKSSTHNSL-------GNVLKEMGDFDGAEEAYKTA 581

Query: 272 IRVDPENASLYVHRAMLMLQARGNVDEAIKLIEKAISIDKSCMFAYETLGTIEVQRGRLE 331
           +++DP +A+++    ML    +   D+A++  + AI +D     AY  LG     +G  E
Sbjct: 582 LQLDPADANIHNSLGMLYTNMK-QFDKAMREFDTAIRLDPKMASAYNNLGIAYANKGDGE 640

Query: 332 EAVKCFNKALPLARDEAE----LSHIY---SLRDAAIAQMKVCERYNIKKKVSPRSQNIT 384
           +A +  N A+ L  D A+    L+ +Y    + D AI ++ +   Y+          +  
Sbjct: 641 KAAEALNTAVALGFDGADVHNNLACVYMTMGMTDNAIRELDIVLEYD--------QTDCN 692

Query: 385 KNEKLAIKQL-RENNDIIIRPADKGGKTVVMDKADYTQKMTSILNSNDYEIIPGDPTKTI 443
            +  L I  L ++N D  I   ++  K +  D AD+   +                    
Sbjct: 693 AHCNLGIAYLSKKNVDKAISEFEEAIK-INADDADFHHYL-------------------- 731

Query: 444 EESEKYGNLENESGQKHAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYC-LFGQYEEA 502
                 GN   E G+   A D   AFA    A +++P  +  +   G +Y   F    +A
Sbjct: 732 ------GNALMEKGRYGEAVD---AFA---RAIEINPENSSVHKALGVVYANYFNNTRKA 779

Query: 503 LRNLDKTIALNPN 515
           L +L +T+ LNPN
Sbjct: 780 LFHLKETLRLNPN 792



 Score = 49.3 bits (116), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 53/207 (25%), Positives = 87/207 (42%), Gaps = 40/207 (19%)

Query: 155 KAFADLDEAE-------KVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNP----- 202
           K   D D AE       ++DP  A+ +   G +Y    Q+++A+R  D  I L+P     
Sbjct: 566 KEMGDFDGAEEAYKTALQLDPADANIHNSLGMLYTNMKQFDKAMREFDTAIRLDPKMASA 625

Query: 203 --NFHVARAQRHFVVHKMIVPGDRERVEQSLKEFRNF----VDTHSNVVEACTLFAQVLV 256
             N  +A A +          GD E+  ++L           D H+N+  AC      + 
Sbjct: 626 YNNLGIAYANK----------GDGEKAAEALNTAVALGFDGADVHNNL--ACVYMTMGMT 673

Query: 257 DQ--EDFDGAEEYFNRSIRVDPENASLYVHRAMLMLQARGNVDEAIKLIEKAISIDKSCM 314
           D    + D   EY       D  + + + +  +  L  + NVD+AI   E+AI I+    
Sbjct: 674 DNAIRELDIVLEY-------DQTDCNAHCNLGIAYLSKK-NVDKAISEFEEAIKINADDA 725

Query: 315 FAYETLGTIEVQRGRLEEAVKCFNKAL 341
             +  LG   +++GR  EAV  F +A+
Sbjct: 726 DFHHYLGNALMEKGRYGEAVDAFARAI 752



 Score = 42.4 bits (98), Expect = 0.68,   Method: Compositional matrix adjust.
 Identities = 72/366 (19%), Positives = 154/366 (42%), Gaps = 22/366 (6%)

Query: 157 FADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQRHFVVH 216
           FA   +A   +P+ A +++  G +Y   G YE+A     KT+ + PN   A      +  
Sbjct: 405 FALWHDALAREPDSARAHHNLGVVYNSKGMYEKAEYEYKKTLEIKPNDAGAYYNLGNLYE 464

Query: 217 KMIVPGDR-ERVEQSLKEFRNFVDTHSNVVEACTLFAQVLVDQEDFDGAEEYFNRSIRVD 275
           +  + GD     E++++      D ++N+         +   ++ +  A + + ++IR +
Sbjct: 465 RKELIGDAIAAYEKAIQSNPYHADAYNNI-------GNIYKKKKQYPAAVKMYEKAIRCN 517

Query: 276 PENASLYVHRAMLMLQARGNVDEAIKLIEKAISI--DKSCMFAYETLGTIEVQRGRLEEA 333
           P +   + +  ++ L+ + N  E++    KA+ I  DKS    + +LG +  + G  + A
Sbjct: 518 PFDFRYHSNLGLIYLETK-NYRESVDAFLKALKIAPDKSS--THNSLGNVLKEMGDFDGA 574

Query: 334 VKCFNKALPLARDEAELSHIYSLRDAAIAQM-KVCERYNIKKKVSPRSQNITKNEKLAIK 392
            + +  AL L   +A + +   +    + Q  K    ++   ++ P+  +   N  L I 
Sbjct: 575 EEAYKTALQLDPADANIHNSLGMLYTNMKQFDKAMREFDTAIRLDPKMASAYNN--LGIA 632

Query: 393 QLRENNDIIIRPADKGGKTVVMDKADYTQKMTSI---LNSNDYEIIPGDPTKTIEESEKY 449
              + +      A      +  D AD    +  +   +   D  I   D     ++++  
Sbjct: 633 YANKGDGEKAAEALNTAVALGFDGADVHNNLACVYMTMGMTDNAIRELDIVLEYDQTD-- 690

Query: 450 GNLENESGQKHAA-SDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDK 508
            N     G  + +  +  KA ++ +EA K++ + AD ++  G      G+Y EA+    +
Sbjct: 691 CNAHCNLGIAYLSKKNVDKAISEFEEAIKINADDADFHHYLGNALMEKGRYGEAVDAFAR 750

Query: 509 TIALNP 514
            I +NP
Sbjct: 751 AIEINP 756


>gi|431808625|ref|YP_007235523.1| hypothetical protein BPP43_10480 [Brachyspira pilosicoli P43/6/78]
 gi|430781984|gb|AGA67268.1| TPR domain-containing protein [Brachyspira pilosicoli P43/6/78]
          Length = 925

 Score = 73.2 bits (178), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 96/432 (22%), Positives = 192/432 (44%), Gaps = 42/432 (9%)

Query: 114 STKAIEDLTQLVEDTSVDPKIKVNAHIKRAVVHLHAASDFTKAFADLDEAEKVDPNVADS 173
           S+K +E+  +L+++         + ++ R V++    +   +   D +++ ++     + 
Sbjct: 14  SSKKVEEAIKLIDEAIEKDNNDSDLYLNRGVLY-SMNNKTNEGIEDFNKSIELKAKNKEV 72

Query: 174 YYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQRHFVVHKMIVPGDRERVEQSLKE 233
           Y+ RG      GQY+EA+ + +K I LNPN   A   R F   ++      E+ ++++++
Sbjct: 73  YFFRGLAKADLGQYKEAIEDFNKAIELNPNNERAYFSRGFSKAQL------EKYKEAIED 126

Query: 234 FRNFVDTHSNVVEACTLFAQVLVDQEDFDGAEEYFNRSIRVDPENASLYVHRAMLMLQAR 293
           F   ++ + N            V+ E  + A E FN+ I ++P N   Y +R +  L+ +
Sbjct: 127 FNKAIELNPNNERTYFSIGLSKVELEKHEEAIEDFNKVIELNPNNKRAYFNRGLSKLKLK 186

Query: 294 GNVDEAIKLIEKAISIDKSC---MFAYETLGTIEVQRGRLEEAVKCFNKALPLARDEAEL 350
               E+I    K+I+++      ++ Y  L   ++++   EE++  FNK++ L  D  E 
Sbjct: 187 K-YKESIADFNKSIALNPDNNEEVYFYRGLSKAKLEK--YEESIVDFNKSIALNPDNNEE 243

Query: 351 SHI--------YSLRDAAIAQMKVCERYNIKKKVSPRSQNITKNEKLAIKQLRE-----N 397
           ++             + +IA        N K ++S  ++ ++  E   +K+  E     N
Sbjct: 244 AYFNRGVSKAKLEKYEESIADFNKVIELNPKNEISYFARGVSNYE---LKKYEESIADFN 300

Query: 398 NDIIIRPADKGGKTVV-MDKADYTQKMTSILNSND-YEIIPGDPTKTIEESEKYGNLENE 455
             I + P +K       + KAD  Q   SI + N   E+ P +    +          N 
Sbjct: 301 KVIELNPNNKEAYFFRGLAKADLGQYKESIADFNKAIELNPNNERAYL----------NR 350

Query: 456 SGQKHAASDFTKAFADLDEAEKVDP-NVADSYYQRGQIYCLFGQYEEALRNLDKTIALNP 514
              K     + +A  D ++A +++P N  ++Y+ RG       +YEEA+ + +K I LNP
Sbjct: 351 GVSKVKLERYEEAIEDFNKAIELNPDNNEEAYFNRGVSKAKLERYEEAIADFNKAIELNP 410

Query: 515 NFHVARAQRHFV 526
           N   A   + F+
Sbjct: 411 NNEYAYFNKGFL 422



 Score = 68.6 bits (166), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 102/479 (21%), Positives = 202/479 (42%), Gaps = 63/479 (13%)

Query: 80  AIRHCTEEIESTSSNHTKALARLLRATVYIFTSQSTKAIEDLTQLVEDTSVDPKIKVNAH 139
           AI+   E IE  +++    L R     +Y   +++ + IED  + +E  + + ++     
Sbjct: 21  AIKLIDEAIEKDNNDSDLYLNR---GVLYSMNNKTNEGIEDFNKSIELKAKNKEVYFFRG 77

Query: 140 IKRAVVHLHAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIA 199
           + +A +       + +A  D ++A +++PN   +Y+ RG       +Y+EA+ + +K I 
Sbjct: 78  LAKADL-----GQYKEAIEDFNKAIELNPNNERAYFSRGFSKAQLEKYKEAIEDFNKAIE 132

Query: 200 LNPNFHVARAQRHFVVHKMIVPGDRERVEQSLKEFRNFVDTHSN---------------- 243
           LNPN      + +F +   +   + E+ E+++++F   ++ + N                
Sbjct: 133 LNPN----NERTYFSIG--LSKVELEKHEEAIEDFNKVIELNPNNKRAYFNRGLSKLKLK 186

Query: 244 -VVEACTLFAQVLVDQED-------FDGA-----EEY------FNRSIRVDPEN-ASLYV 283
              E+   F + +    D       + G      E+Y      FN+SI ++P+N    Y 
Sbjct: 187 KYKESIADFNKSIALNPDNNEEVYFYRGLSKAKLEKYEESIVDFNKSIALNPDNNEEAYF 246

Query: 284 HRAMLMLQARGNVDEAIKLIEKAISIDKSCMFAYETLGTIEVQRGRLEEAVKCFNKALPL 343
           +R +   +     +E+I    K I ++     +Y   G    +  + EE++  FNK + L
Sbjct: 247 NRGVSKAKLEK-YEESIADFNKVIELNPKNEISYFARGVSNYELKKYEESIADFNKVIEL 305

Query: 344 ARDEAELSHIYSLRDAAIAQMK-VCERYNIKKKVSPRSQNITKNEKLAIKQLRENNDIII 402
             +  E      L  A + Q K     +N   +++P ++    N  ++  +L    + I 
Sbjct: 306 NPNNKEAYFFRGLAKADLGQYKESIADFNKAIELNPNNERAYLNRGVSKVKLERYEEAI- 364

Query: 403 RPADKGGKTVVMDKAD----YTQKMTSILNSNDYEIIPGDPTKTIE--ESEKYGNLENES 456
              +   K + ++  +    Y  +  S      YE    D  K IE   + +Y    N+ 
Sbjct: 365 ---EDFNKAIELNPDNNEEAYFNRGVSKAKLERYEEAIADFNKAIELNPNNEYAYF-NKG 420

Query: 457 GQKHAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPN 515
             K     + K+  D ++A K++PN    Y+ RG       +YEEA+ + +K I LNPN
Sbjct: 421 FLKLILGLYKKSIKDFNKAIKLNPNDEKLYFNRGISNYELKKYEEAIEDFNKAIKLNPN 479



 Score = 44.7 bits (104), Expect = 0.13,   Method: Compositional matrix adjust.
 Identities = 50/234 (21%), Positives = 102/234 (43%), Gaps = 17/234 (7%)

Query: 57  NESHELDLLSKAKRAFEHEDYLTAIRHCTEEIESTSSNHTKALARLLRATVYIFTSQSTK 116
           N ++E   L++     + E Y  AI    + IE    N+ +A     R        +  +
Sbjct: 340 NPNNERAYLNRGVSKVKLERYEEAIEDFNKAIELNPDNNEEAYFN--RGVSKAKLERYEE 397

Query: 117 AIEDLTQLVEDTSVDPKIKVNAHIKRAVVHLHAASDFTKAFADLDEAEKVDPNVADSYYQ 176
           AI D  + +E    +     N    + ++ L     + K+  D ++A K++PN    Y+ 
Sbjct: 398 AIADFNKAIELNPNNEYAYFNKGFLKLILGL-----YKKSIKDFNKAIKLNPNDEKLYFN 452

Query: 177 RGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQRHFVVHKMIVPGDRERVEQSLKEFRN 236
           RG       +YEEA+ + +K I LNPN   A   R       I+  + ++ +Q++ +F+ 
Sbjct: 453 RGISNYELKKYEEAIEDFNKAIKLNPNDEDAYFNR------AILKINLKKYKQAVNDFKI 506

Query: 237 FVDTHSNVVEACTLFAQVLVDQEDFDGAEEYFNRSIRVDPENASLYVHRAMLML 290
           F   +++  +   +  ++L +   ++   ++F   + V  EN  L+ +  +  L
Sbjct: 507 FAKNNNDAFDITII--KILQEFNKYNDINKFF--KLLVIDENKELWKNEPITNL 556


>gi|125863578|gb|ABN58618.1| TOM70 [Saccharomyces cerevisiae]
          Length = 617

 Score = 72.8 bits (177), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 66/250 (26%), Positives = 120/250 (48%), Gaps = 15/250 (6%)

Query: 135 KVNAHIKRAVVHLHAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNL 194
           +VN++I  A++ +   +D T+ +   D+A K+D N +  YY RGQ+  +   Y++A ++ 
Sbjct: 362 RVNSYIYMALI-MADRNDSTEYYNYFDKALKLDSNNSSVYYHRGQMNFILQNYDQAGKDF 420

Query: 195 DKTIALNPNFHVARAQRHFVVHKMIVPGDRERVEQSLKEFRNFVDTHSNVVEACTLFAQV 254
           DK   L+P       Q   + ++     D E +    K  R F +      E    FA++
Sbjct: 421 DKAKELDPGNIFPYIQLACLAYRENKFDDCETLFSEAK--RKFPEAP----EVPNFFAEI 474

Query: 255 LVDQEDFDGAEEYFNRSIRVDPENASLYVHRAMLMLQAR--------GNVDEAIKLIEKA 306
           L D+ DFD A + ++ +I ++ +   +YV  A L+ +A          N  EA  L+EKA
Sbjct: 475 LTDKNDFDKALKQYDLAIELENKLDGIYVGIAPLVGKATLLTRNPTVENFIEATNLLEKA 534

Query: 307 ISIDKSCMFAYETLGTIEVQRGRLEEAVKCFNKALPLARDEAELSHIYSLRDAAIAQMKV 366
             +D     A   L  +++Q+  ++EA+  F ++  LAR   E     +  +AA  Q ++
Sbjct: 535 SKLDPRSEQAKIGLAQMKLQQEDIDEAITLFEESADLARTMEEKLQAITFAEAAKVQQRI 594

Query: 367 CERYNIKKKV 376
                + KK+
Sbjct: 595 RSDPVLAKKI 604


>gi|428307503|ref|YP_007144328.1| hypothetical protein Cri9333_4011 [Crinalium epipsammum PCC 9333]
 gi|428249038|gb|AFZ14818.1| Tetratricopeptide TPR_1 repeat-containing protein [Crinalium
            epipsammum PCC 9333]
          Length = 1095

 Score = 72.8 bits (177), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 95/405 (23%), Positives = 174/405 (42%), Gaps = 40/405 (9%)

Query: 152  DFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQR 211
            ++ KA AD + A K+ P+ AD YY RG  Y    +Y++AL   ++ IAL     +  A+ 
Sbjct: 683  EYQKALADYNRAIKLQPDYADGYYNRGVTYFYLQEYQKALAEYNRAIAL----QLDNAKA 738

Query: 212  HFVVHKMIVPGDRERVEQSLKEFRNFVDTHSNVVEACTLFAQVLVDQED-FDGAEEY--- 267
            +          +R     +L+E++  +  ++  +E     A+V  ++ + +D  +EY   
Sbjct: 739  Y---------NNRGNTYDNLQEYQKALADYNRAIELQPDLAEVYYNRGNTYDNLQEYQKA 789

Query: 268  ---FNRSIRVDPENASLYVHRAMLMLQARGNVDEAIKLIEKAISIDKSCMFAYETLGTIE 324
               + R+I + P+ A  Y +R     ++     +A+    +AI++      AY   G   
Sbjct: 790  LADYTRAIELQPDLAIAYSNRGN-TYKSLQEYQKALADYTRAIALKPDDAKAYYNRG--- 845

Query: 325  VQRGRLEE---AVKCFNKALPLARDEAELSHIYSLR-DAAIAQMKVCERYNIKKKVSPRS 380
            V  G L+E   A+  F +A+ L  D A   +   L  D      K    Y    ++ P  
Sbjct: 846  VTYGNLQEYQKALADFTQAIALEPDYASAYYNRGLTYDNLQEYQKAIADYTRAIELQPDL 905

Query: 381  QNITKNEKLAIKQLRENNDIIIRPADKGGKTVVM-DKAD-YTQKMTSILNSNDYEIIPGD 438
             +   +  +    L+E    +   AD      +  D AD Y  +  +  +  +Y+    D
Sbjct: 906  ADAYNSRGVTYYNLQEYQKAL---ADYTSAIALQPDLADAYNNRGNTYDDLQEYQKAIAD 962

Query: 439  PTKTI----EESEKYGNLENESGQKHAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYC 494
              + I    +++E Y    N     +   ++ KA AD + A  + PN AD+Y  RG  Y 
Sbjct: 963  YNRAIALQPDDTEAY---YNRGITYYNLQEYQKALADYNRAIALKPNDADAYSNRGLTYF 1019

Query: 495  LFGQYEEALRNLDKTIALNPNFHVARAQRHFVWTSTLAELMAFSD 539
               +Y++A+ + ++ IAL P+   A   R   ++       AF+D
Sbjct: 1020 NLQEYQKAIADYNRAIALQPDDAKAYGNRGLTYSKLQEYQKAFAD 1064



 Score = 62.8 bits (151), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 89/411 (21%), Positives = 166/411 (40%), Gaps = 69/411 (16%)

Query: 152 DFTKAFADLDEAEKV---DPNV-----ADSYYQRGQIYCLFGQYEEALRNLDKTIALNPN 203
           DF +A A  D+A ++    PN      A +YY +G       +Y EA+  L +   ++P 
Sbjct: 540 DFKEALAAFDKAIQIIQHQPNFSKQYYAQAYYGKGLTLYWMEKYSEAVDALKQATQIDPK 599

Query: 204 FHVARAQRHFVVHKM-----IVPGDRERVEQSLKEFRNFV---DTHSNV---VEACTLFA 252
           FH A   R   +  +      +   ++ ++ S +EF  +V   +T SN+    +A   ++
Sbjct: 600 FHQAWRLRGAALKSLKKYPEALASYQQAIKLSPQEFVLYVELGNTFSNLERYQDAIVAYS 659

Query: 253 QVLVDQE----------DFDGAEEY------FNRSIRVDPENASLYVHRAMLMLQARGNV 296
             +  ++           +   +EY      +NR+I++ P+ A  Y +R +     +   
Sbjct: 660 DAIKIKQHPWAYNNRGLTYKSLQEYQKALADYNRAIKLQPDYADGYYNRGVTYFYLQ-EY 718

Query: 297 DEAIKLIEKAISIDKSCMFAYETLGTIEVQRGRLEEAVKCFNKALPLARDEAELSHIYSL 356
            +A+    +AI++      AY   G         ++A+  +N+A+ L  D AE   +Y  
Sbjct: 719 QKALAEYNRAIALQLDNAKAYNNRGNTYDNLQEYQKALADYNRAIELQPDLAE---VYYN 775

Query: 357 RDAAIAQMKVCERYNIKKKVSPRSQNITKNEKLAIKQLRENNDIIIRPADKGGKTVVMDK 416
           R      ++       +K ++  ++ I     LAI      N        K  +      
Sbjct: 776 RGNTYDNLQ-----EYQKALADYTRAIELQPDLAIAYSNRGNTY------KSLQEYQKAL 824

Query: 417 ADYTQKMTSILNSNDYEIIPGDPTKTIEESEKYGNLENESGQKHAASDFTKAFADLDEAE 476
           ADYT+ +          + P D          YGNL+          ++ KA AD  +A 
Sbjct: 825 ADYTRAIA---------LKPDDAKAYYNRGVTYGNLQ----------EYQKALADFTQAI 865

Query: 477 KVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQRHFVW 527
            ++P+ A +YY RG  Y    +Y++A+ +  + I L P+   A   R   +
Sbjct: 866 ALEPDYASAYYNRGLTYDNLQEYQKAIADYTRAIELQPDLADAYNSRGVTY 916



 Score = 50.4 bits (119), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 71/298 (23%), Positives = 123/298 (41%), Gaps = 49/298 (16%)

Query: 260 DFDGAEEYFNRSIRV---DPENASLYVHRAM----LMLQARGNVDEAIKLIEKAISIDKS 312
           DF  A   F+++I++    P  +  Y  +A     L L       EA+  +++A  ID  
Sbjct: 540 DFKEALAAFDKAIQIIQHQPNFSKQYYAQAYYGKGLTLYWMEKYSEAVDALKQATQIDPK 599

Query: 313 CMFAYETLGTIEVQRGRLEEAVKCFNKALPLARDE----AELSHIYS----LRDAAIAQM 364
              A+   G       +  EA+  + +A+ L+  E     EL + +S     +DA +A  
Sbjct: 600 FHQAWRLRGAALKSLKKYPEALASYQQAIKLSPQEFVLYVELGNTFSNLERYQDAIVAYS 659

Query: 365 KVCERYNIKKKVSPRSQNITKNEKLAIKQLRE--------NNDIIIRPADKGGKTVVMDK 416
                  IK K  P + N   N  L  K L+E        N  I ++P          D 
Sbjct: 660 DA-----IKIKQHPWAYN---NRGLTYKSLQEYQKALADYNRAIKLQP----------DY 701

Query: 417 AD-YTQKMTSILNSNDYEIIPGDPTKTI----EESEKYGNLENESGQKHAASDFTKAFAD 471
           AD Y  +  +     +Y+    +  + I    + ++ Y N  N         ++ KA AD
Sbjct: 702 ADGYYNRGVTYFYLQEYQKALAEYNRAIALQLDNAKAYNNRGNTYDNLQ---EYQKALAD 758

Query: 472 LDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQRHFVWTS 529
            + A ++ P++A+ YY RG  Y    +Y++AL +  + I L P+  +A + R   + S
Sbjct: 759 YNRAIELQPDLAEVYYNRGNTYDNLQEYQKALADYTRAIELQPDLAIAYSNRGNTYKS 816


>gi|411119879|ref|ZP_11392255.1| tetratricopeptide repeat protein [Oscillatoriales cyanobacterium
           JSC-12]
 gi|410710035|gb|EKQ67546.1| tetratricopeptide repeat protein [Oscillatoriales cyanobacterium
           JSC-12]
          Length = 467

 Score = 72.8 bits (177), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 81/376 (21%), Positives = 154/376 (40%), Gaps = 44/376 (11%)

Query: 153 FTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQRH 212
           +  A A  D+A K+ P    +++ RG      G YE AL + DK++ + P++  +   R 
Sbjct: 93  YDSAIASYDKAIKLRPTFHQAWFNRGNALDKLGCYEAALESYDKSLEIEPDYSKSWYNRG 152

Query: 213 FVVHKMIVPGDRERVEQSLKEFRNFVDTHSNVVEACTLFAQVLVDQEDFDGAEEYFNRSI 272
             + K+      ER + ++  +   ++   +   A    A +L  Q+ +  A E + R +
Sbjct: 153 ITLSKL------ERYDDAIASYDKAIEFRPHYSNAWYNRANILHRQKRYSEALESYERVL 206

Query: 273 RVDPENASLYVHRAMLMLQARGNVDEAIKLIEKAISIDKSCMFAYETLGTIEVQRGRLEE 332
            + P+    + +   + L   G  +EA+    +A+ I      A+   G      GR +E
Sbjct: 207 SIKPDWHGAWYNLGNI-LHKLGRHEEAVASYNRALKIVPKFYGAWYNRGNALDALGRYDE 265

Query: 333 AVKCFNKALPLARD--EAELSHIYSLRDAAIAQMKVCERYNIKKKVSPRSQNITKNEKLA 390
           A++ + +AL +  +  EA  +   +L  A+  +  +   Y+   ++ P+      +   A
Sbjct: 266 AIESYRRALEIKPNLREAWYNWGSTLYKASRYEEAIAS-YDQAIRLDPKFAKAWSSRGTA 324

Query: 391 IKQLRENNDIIIRPADKGGKTVVMDKADYTQKMTSILNSNDYEIIPGDPTKTIEESEKYG 450
            ++L    + II            DKA   Q    +     YE   G            G
Sbjct: 325 FRKLGMYAEAIIS----------YDKA--VQHQPDL-----YEAWYGRGIAL-------G 360

Query: 451 NLENESGQKHAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTI 510
           +L    G   AA       A  D A  ++P+   ++Y RG      G Y+ A+ + D+ +
Sbjct: 361 HL----GHNEAA------VASYDHAVAINPDFYPAWYSRGVALGHLGDYDAAITSYDQAL 410

Query: 511 ALNPNFHVARAQRHFV 526
            +NPNF  A ++R+  
Sbjct: 411 QINPNFPEAVSRRNLA 426



 Score = 68.6 bits (166), Expect = 9e-09,   Method: Compositional matrix adjust.
 Identities = 77/347 (22%), Positives = 139/347 (40%), Gaps = 40/347 (11%)

Query: 177 RGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQRHFVVHKMIVPGDRERVEQSLKEFRN 236
           RG      G Y+ A+ + DK I L P FH A   R   + K+         E +L+ +  
Sbjct: 83  RGIALFNLGSYDSAIASYDKAIKLRPTFHQAWFNRGNALDKLGC------YEAALESYDK 136

Query: 237 FVDTHSNVVEACTLFAQVLVDQEDFDGAEEYFNRSIRVDPENASLYVHRAMLMLQARGNV 296
            ++   +  ++       L   E +D A   ++++I   P  ++ + +RA + L  +   
Sbjct: 137 SLEIEPDYSKSWYNRGITLSKLERYDDAIASYDKAIEFRPHYSNAWYNRANI-LHRQKRY 195

Query: 297 DEAIKLIEKAISIDKSCMFAYETLGTIEVQRGRLEEAVKCFNKALPLARDEAELSHIYSL 356
            EA++  E+ +SI      A+  LG I  + GR EEAV  +N+AL +      +   Y  
Sbjct: 196 SEALESYERVLSIKPDWHGAWYNLGNILHKLGRHEEAVASYNRALKI------VPKFYGA 249

Query: 357 RDAAIAQMKVCERYNIKKKVSPRSQNITKNEKLAIKQLRENNDIIIRPADKGGKTVVMDK 416
                  +    RY+   +   R+  I  N               +R A     + +   
Sbjct: 250 WYNRGNALDALGRYDEAIESYRRALEIKPN---------------LREAWYNWGSTLYKA 294

Query: 417 ADYTQKMTSILNSNDYEIIPGDPTKTIEESEKYGNLENESGQKHAASDFTKAFADLDEAE 476
           + Y + + S       + I  DP      S + G    + G       + +A    D+A 
Sbjct: 295 SRYEEAIASYD-----QAIRLDPKFAKAWSSR-GTAFRKLGM------YAEAIISYDKAV 342

Query: 477 KVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQR 523
           +  P++ +++Y RG      G  E A+ + D  +A+NP+F+ A   R
Sbjct: 343 QHQPDLYEAWYGRGIALGHLGHNEAAVASYDHAVAINPDFYPAWYSR 389



 Score = 45.8 bits (107), Expect = 0.052,   Method: Compositional matrix adjust.
 Identities = 31/130 (23%), Positives = 60/130 (46%), Gaps = 6/130 (4%)

Query: 147 LHAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHV 206
           L+ AS + +A A  D+A ++DP  A ++  RG  +   G Y EA+ + DK +   P+ + 
Sbjct: 291 LYKASRYEEAIASYDQAIRLDPKFAKAWSSRGTAFRKLGMYAEAIISYDKAVQHQPDLYE 350

Query: 207 ARAQRHFVVHKMIVPGDRERVEQSLKEFRNFVDTHSNVVEACTLFAQVLVDQEDFDGAEE 266
           A   R       I  G     E ++  + + V  + +   A       L    D+D A  
Sbjct: 351 AWYGR------GIALGHLGHNEAAVASYDHAVAINPDFYPAWYSRGVALGHLGDYDAAIT 404

Query: 267 YFNRSIRVDP 276
            ++++++++P
Sbjct: 405 SYDQALQINP 414



 Score = 42.0 bits (97), Expect = 0.75,   Method: Compositional matrix adjust.
 Identities = 22/73 (30%), Positives = 38/73 (52%), Gaps = 3/73 (4%)

Query: 156 AFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQRHFVV 215
           A A  D A  ++P+   ++Y RG      G Y+ A+ + D+ + +NPNF  A ++R+  +
Sbjct: 368 AVASYDHAVAINPDFYPAWYSRGVALGHLGDYDAAITSYDQALQINPNFPEAVSRRNLAL 427

Query: 216 HKMIVP---GDRE 225
           +    P    DRE
Sbjct: 428 NYTSQPELSADRE 440


>gi|406912627|gb|EKD52197.1| peptidase C14 caspase catalytic subunit P20 [uncultured bacterium]
          Length = 714

 Score = 72.8 bits (177), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 53/205 (25%), Positives = 96/205 (46%), Gaps = 10/205 (4%)

Query: 153 FTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQRH 212
           F +A +D  +A K+D + A++YY RG  +     YE+A+ + +K I  NPN  +A   R 
Sbjct: 374 FDEAISDFTQALKIDEHDANTYYDRGTAWLEKKNYEQAITDFNKAIEENPNLDIAFYNRG 433

Query: 213 FVVHKMIVPGDRERVEQSLKEFRNFVDTHSNVVEACTLFAQVLVDQEDFDGAEEYFNRSI 272
                      ++ + ++L+++   +D +     A      + +    +D A   F++ I
Sbjct: 434 RAWKA------KQDITKALEDYSKAIDINPIFESAYNNRGNLYLGNGFYDKAIADFSKLI 487

Query: 273 RVDPENASLYVHRAMLMLQARGNVDEAIKLIEKAISIDKSCMFAYETLGTIEVQRGRLEE 332
            ++P  +  Y +R  L     G   +AI+  +KA+ I+ S + AY   G   V  G + +
Sbjct: 488 EINPSRSDAYSNRG-LAWSGVGEYSKAIEDYDKALLIEPSNIHAYVNRGVAWVHMGEIHK 546

Query: 333 AVKCFNKALPLARDEAELSHIYSLR 357
           A   +NKAL +       SH Y+ R
Sbjct: 547 AFDDYNKALQI---NPNFSHAYANR 568



 Score = 63.9 bits (154), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 71/285 (24%), Positives = 121/285 (42%), Gaps = 44/285 (15%)

Query: 257 DQEDFDGAEEYFNRSIRVDPENASLYVHRAMLMLQARGNVDEAIKLIEKAISIDKSCMFA 316
           D+ +F+ A   ++ +I  DP+N  LY +R     +  G+ DEAI    +A+ ID+     
Sbjct: 336 DKGNFEKAIGAYSNAIEFDPQNHKLYANRGKAWFKT-GHFDEAISDFTQALKIDEHDANT 394

Query: 317 YETLGTIEVQRGRLEEAVKCFNKALPLARDEAELSHIYSLRDAAIAQMKVCERYNIKKKV 376
           Y   GT  +++   E+A+  FNKA+    +   L   +               YN + + 
Sbjct: 395 YYDRGTAWLEKKNYEQAITDFNKAI---EENPNLDIAF---------------YN-RGRA 435

Query: 377 SPRSQNITKNEKLAIKQLRENNDIIIRPADKGGKTVVMDKADYTQKMTSILNSNDYEIIP 436
               Q+ITK    A++   +  DI            + + A Y  +    L +  Y+   
Sbjct: 436 WKAKQDITK----ALEDYSKAIDI----------NPIFESA-YNNRGNLYLGNGFYDKAI 480

Query: 437 GDPTKTIE----ESEKYGNLENESGQKHAASDFTKAFADLDEAEKVDPNVADSYYQRGQI 492
            D +K IE     S+ Y    N         +++KA  D D+A  ++P+   +Y  RG  
Sbjct: 481 ADFSKLIEINPSRSDAY---SNRGLAWSGVGEYSKAIEDYDKALLIEPSNIHAYVNRGVA 537

Query: 493 YCLFGQYEEALRNLDKTIALNPNFHVARAQRH--FVWTSTLAELM 535
           +   G+  +A  + +K + +NPNF  A A R   F+ T  L   M
Sbjct: 538 WVHMGEIHKAFDDYNKALQINPNFSHAYANRANLFLQTGNLNSAM 582



 Score = 53.9 bits (128), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 46/205 (22%), Positives = 93/205 (45%), Gaps = 12/205 (5%)

Query: 104 RATVYIFTSQSTKAIEDLTQLVEDTSVDPKIKVNAHIKRAVVHLHAASDFTKAFADLDEA 163
           R T ++      +AI D  + +E+   +P + + A   R      A  D TKA  D  +A
Sbjct: 398 RGTAWLEKKNYEQAITDFNKAIEE---NPNLDI-AFYNRGRA-WKAKQDITKALEDYSKA 452

Query: 164 EKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQRHFVVHKMIVPGD 223
             ++P    +Y  RG +Y   G Y++A+ +  K I +NP+   A + R      +     
Sbjct: 453 IDINPIFESAYNNRGNLYLGNGFYDKAIADFSKLIEINPSRSDAYSNRGLAWSGV----- 507

Query: 224 RERVEQSLKEFRNFVDTHSNVVEACTLFAQVLVDQEDFDGAEEYFNRSIRVDPENASLYV 283
                ++++++   +    + + A        V   +   A + +N++++++P  +  Y 
Sbjct: 508 -GEYSKAIEDYDKALLIEPSNIHAYVNRGVAWVHMGEIHKAFDDYNKALQINPNFSHAYA 566

Query: 284 HRAMLMLQARGNVDEAIKLIEKAIS 308
           +RA L LQ  GN++ A+  I  A++
Sbjct: 567 NRANLFLQT-GNLNSAMTDIAFAMN 590



 Score = 53.9 bits (128), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 59/232 (25%), Positives = 100/232 (43%), Gaps = 14/232 (6%)

Query: 151 SDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQ 210
            +F KA      A + DP     Y  RG+ +   G ++EA+   D T AL  + H A   
Sbjct: 338 GNFEKAIGAYSNAIEFDPQNHKLYANRGKAWFKTGHFDEAIS--DFTQALKIDEHDANT- 394

Query: 211 RHFVVHKMIVPGDRERVEQSLKEFRNFVDTHSNVVEACTLFAQVLVDQEDFDGAEEYFNR 270
                 +     +++  EQ++ +F   ++ + N+  A     +    ++D   A E +++
Sbjct: 395 ---YYDRGTAWLEKKNYEQAITDFNKAIEENPNLDIAFYNRGRAWKAKQDITKALEDYSK 451

Query: 271 SIRVDPENASLYVHRAMLMLQARGNVDEAIKLIEKAISIDKSCMFAYETLGTIEVQRGRL 330
           +I ++P   S Y +R  L L   G  D+AI    K I I+ S   AY   G      G  
Sbjct: 452 AIDINPIFESAYNNRGNLYL-GNGFYDKAIADFSKLIEINPSRSDAYSNRGLAWSGVGEY 510

Query: 331 EEAVKCFNKALPLARDEAELSHIYSLRDAAIAQM----KVCERYNIKKKVSP 378
            +A++ ++KAL +   E    H Y  R  A   M    K  + YN   +++P
Sbjct: 511 SKAIEDYDKALLI---EPSNIHAYVNRGVAWVHMGEIHKAFDDYNKALQINP 559


>gi|190409107|gb|EDV12372.1| mitochondrial precursor proteins import receptor [Saccharomyces
           cerevisiae RM11-1a]
          Length = 617

 Score = 72.8 bits (177), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 66/250 (26%), Positives = 120/250 (48%), Gaps = 15/250 (6%)

Query: 135 KVNAHIKRAVVHLHAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNL 194
           +VN++I  A++ +   +D T+ +   D+A K+D N +  YY RGQ+  +   Y++A ++ 
Sbjct: 362 RVNSYIYMALI-MADRNDSTEYYNYFDKALKLDSNNSSVYYHRGQMNFILQNYDQAGKDF 420

Query: 195 DKTIALNPNFHVARAQRHFVVHKMIVPGDRERVEQSLKEFRNFVDTHSNVVEACTLFAQV 254
           DK   L+P       Q   + ++     D E +    K  R F +      E    FA++
Sbjct: 421 DKAKELDPENIFPYIQLACLAYRENKFDDCETLFSEAK--RKFPEAP----EVPNFFAEI 474

Query: 255 LVDQEDFDGAEEYFNRSIRVDPENASLYVHRAMLMLQAR--------GNVDEAIKLIEKA 306
           L D+ DFD A + ++ +I ++ +   +YV  A L+ +A          N  EA  L+EKA
Sbjct: 475 LTDKNDFDKALKQYDLAIELENKLDGIYVGIAPLVGKATLLTRNPTVENFIEATNLLEKA 534

Query: 307 ISIDKSCMFAYETLGTIEVQRGRLEEAVKCFNKALPLARDEAELSHIYSLRDAAIAQMKV 366
             +D     A   L  +++Q+  ++EA+  F ++  LAR   E     +  +AA  Q ++
Sbjct: 535 SKLDPRSEQAKIGLAQMKLQQEDIDEAITLFEESADLARTMEEKLQAITFAEAAKVQQRI 594

Query: 367 CERYNIKKKV 376
                + KK+
Sbjct: 595 RSDPVLAKKI 604


>gi|376005819|ref|ZP_09783211.1| hypothetical protein (secreted) [Arthrospira sp. PCC 8005]
 gi|375325809|emb|CCE18964.1| hypothetical protein (secreted) [Arthrospira sp. PCC 8005]
          Length = 631

 Score = 72.8 bits (177), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 48/207 (23%), Positives = 97/207 (46%), Gaps = 10/207 (4%)

Query: 143 AVVHLHAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNP 202
           A+V L     +++A    D A K+ P  +D++Y RG +     +Y  AL   ++ + + P
Sbjct: 311 ALVRLQ---QYSQALECYDRALKIQPQRSDAWYNRGNVLVRLKRYSPALEAYNRALKIEP 367

Query: 203 NFHVARAQRHFVVHKMIVPGDRERVEQSLKEFRNFVDTHSNVVEACTLFAQVLVDQEDFD 262
           N +     R  ++ K       ++ EQ+L+ +   +   +N  E       VL   + + 
Sbjct: 368 NDYAVWHNRGALLRKF------QKYEQALESYDRAIMLEANHYETWHNRGNVLSQLKRYQ 421

Query: 263 GAEEYFNRSIRVDPENASLYVHRAMLMLQARGNVDEAIKLIEKAISIDKSCMFAYETLGT 322
            A   ++R+I+++P    ++ +R M +        EA+   E+AIS++      + + G 
Sbjct: 422 EAISSYDRAIQINPGQFDIWANRGMALCHIH-QYSEALSCYEQAISLNSKDPELWISQGG 480

Query: 323 IEVQRGRLEEAVKCFNKALPLARDEAE 349
           + V+  R EEA+ C+++A+    D  E
Sbjct: 481 VLVKLARYEEALICYDRAISFKSDSYE 507



 Score = 64.7 bits (156), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 73/360 (20%), Positives = 158/360 (43%), Gaps = 48/360 (13%)

Query: 168 PNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQRHFVVHKMIVPGDRERV 227
           P +AD + ++G+      QY++A+   D+ + +NP+   A  Q+   + ++      ++ 
Sbjct: 265 PLIADDFLKKGEALINERQYKQAIAACDRALEINPDLDEAWYQKGNALVRL------QQY 318

Query: 228 EQSLKEFRNFVDTHSNVVEACTLFAQVLVDQEDFDGAEEYFNRSIRVDPENASLYVHRAM 287
            Q+L+ +   +       +A      VLV  + +  A E +NR+++++P + +++ +R  
Sbjct: 319 SQALECYDRALKIQPQRSDAWYNRGNVLVRLKRYSPALEAYNRALKIEPNDYAVWHNRGA 378

Query: 288 LMLQARGNVDEAIKLIEKAISIDKSCMFAYETLGTIEVQRGRLEEAVKCFNKALPLARDE 347
           L L+     ++A++  ++AI ++ +    +   G +  Q  R +EA+  +++A+ +   +
Sbjct: 379 L-LRKFQKYEQALESYDRAIMLEANHYETWHNRGNVLSQLKRYQEAISSYDRAIQINPGQ 437

Query: 348 AELSHIYSLRDAAIAQMKVCERYNIKKKVSPRSQNITKNEK---LAIKQLRENNDIIIRP 404
            +   I++ R      M +C  +   + +S   Q I+ N K   L I Q      ++++ 
Sbjct: 438 FD---IWANRG-----MALCHIHQYSEALSCYEQAISLNSKDPELWISQ----GGVLVKL 485

Query: 405 ADKGGKTVVMDKADYTQKMTSILNSNDYEIIPGDPTKTIEESEKYGNLENESGQKHAASD 464
           A      +  D+A           S+ YE   G            G +        A   
Sbjct: 486 ARYEEALICYDRA-------ISFKSDSYEAWMGR-----------GEILT------ALKQ 521

Query: 465 FTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQRH 524
           + +A A+ D    + P+   ++ QRG       Q+++A+   D  IAL P+   A + RH
Sbjct: 522 YEQALANWDRVIALQPDAYQAWCQRGICLEKMEQHDDAIACFDTAIALKPDH--AESWRH 579



 Score = 53.9 bits (128), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 43/197 (21%), Positives = 89/197 (45%), Gaps = 13/197 (6%)

Query: 153 FTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALN---PNFHVARA 209
           + +A +  D A +++P   D +  RG   C   QY EAL   ++ I+LN   P   +++ 
Sbjct: 420 YQEAISSYDRAIQINPGQFDIWANRGMALCHIHQYSEALSCYEQAISLNSKDPELWISQG 479

Query: 210 QRHFVVHKMIVPGDRERVEQSLKEFRNFVDTHSNVVEACTLFAQVLVDQEDFDGAEEYFN 269
               V+ K+       R E++L  +   +   S+  EA     ++L   + ++ A   ++
Sbjct: 480 G---VLVKLA------RYEEALICYDRAISFKSDSYEAWMGRGEILTALKQYEQALANWD 530

Query: 270 RSIRVDPENASLYVHRAMLMLQARGNVDEAIKLIEKAISIDKSCMFAYETLGTIEVQRGR 329
           R I + P+    +  R  + L+     D+AI   + AI++      ++   G +  +  +
Sbjct: 531 RVIALQPDAYQAWCQRG-ICLEKMEQHDDAIACFDTAIALKPDHAESWRHRGALLSRLKK 589

Query: 330 LEEAVKCFNKALPLARD 346
            +EA+    KA+ + +D
Sbjct: 590 YQEAIASLGKAISIQKD 606



 Score = 52.0 bits (123), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 50/208 (24%), Positives = 82/208 (39%), Gaps = 46/208 (22%)

Query: 104 RATVYIFTSQSTKAIEDLTQLVEDTSVDPKIKVNAHIKRAVVHLHAASDFTKAFADLDEA 163
           R        Q ++A+    Q +   S DP++ ++      +V L   + + +A    D A
Sbjct: 444 RGMALCHIHQYSEALSCYEQAISLNSKDPELWISQ--GGVLVKL---ARYEEALICYDRA 498

Query: 164 EKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQRHFVVHKMIVPGD 223
                +  +++  RG+I     QYE+AL N D+ IAL P+ + A  QR   + KM     
Sbjct: 499 ISFKSDSYEAWMGRGEILTALKQYEQALANWDRVIALQPDAYQAWCQRGICLEKM----- 553

Query: 224 RERVEQSLKEFRNFVDTHSNVVEACTLFAQVLVDQEDFDGAEEYFNRSIRVDPENASLYV 283
                                              E  D A   F+ +I + P++A  + 
Sbjct: 554 -----------------------------------EQHDDAIACFDTAIALKPDHAESWR 578

Query: 284 HRAMLMLQARGNVDEAIKLIEKAISIDK 311
           HR  L+ + +    EAI  + KAISI K
Sbjct: 579 HRGALLSRLK-KYQEAIASLGKAISIQK 605


>gi|125863568|gb|ABN58609.1| TOM70 [Saccharomyces cerevisiae]
          Length = 617

 Score = 72.8 bits (177), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 66/250 (26%), Positives = 120/250 (48%), Gaps = 15/250 (6%)

Query: 135 KVNAHIKRAVVHLHAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNL 194
           +VN++I  A++ +   +D T+ +   D+A K+D N +  YY RGQ+  +   Y++A ++ 
Sbjct: 362 RVNSYIYMALI-MADRNDSTEYYNYFDKALKLDSNNSSVYYHRGQMNFILQNYDQAGKDF 420

Query: 195 DKTIALNPNFHVARAQRHFVVHKMIVPGDRERVEQSLKEFRNFVDTHSNVVEACTLFAQV 254
           DK   L+P       Q   + ++     D E +    K  R F +      E    FA++
Sbjct: 421 DKAKELDPENIFPYIQLACLAYRENKFDDCETLFSEAK--RKFPEAP----EVPNFFAEI 474

Query: 255 LVDQEDFDGAEEYFNRSIRVDPENASLYVHRAMLMLQAR--------GNVDEAIKLIEKA 306
           L D+ DFD A + ++ +I ++ +   +YV  A L+ +A          N  EA  L+EKA
Sbjct: 475 LTDKNDFDKALKQYDLAIELENKLDGIYVGIAPLVGKATLLTRNPTVENFIEATNLLEKA 534

Query: 307 ISIDKSCMFAYETLGTIEVQRGRLEEAVKCFNKALPLARDEAELSHIYSLRDAAIAQMKV 366
             +D     A   L  +++Q+  ++EA+  F ++  LAR   E     +  +AA  Q ++
Sbjct: 535 SKLDPRSEQAKIGLAQMKLQQEDIDEAITLFEESADLARTMEEKLQAITFAEAAKVQQRI 594

Query: 367 CERYNIKKKV 376
                + KK+
Sbjct: 595 RSDPVLAKKI 604


>gi|398364773|ref|NP_014278.3| Tom70p [Saccharomyces cerevisiae S288c]
 gi|1709462|sp|P07213.2|TOM70_YEAST RecName: Full=Mitochondrial import receptor subunit TOM70; AltName:
           Full=70 kDa mitochondrial outer membrane protein;
           AltName: Full=Translocase of outer membrane 70 kDa
           subunit
 gi|239977637|sp|A6ZRW3.1|TOM70_YEAS7 RecName: Full=Mitochondrial import receptor subunit TOM70; AltName:
           Full=70 kDa mitochondrial outer membrane protein;
           AltName: Full=Translocase of outer membrane 70 kDa
           subunit
 gi|1183952|emb|CAA93386.1| 70Kd Mitochondrial outer membrane protein [Saccharomyces
           cerevisiae]
 gi|1302050|emb|CAA96002.1| TOM70 [Saccharomyces cerevisiae]
 gi|125863485|gb|ABN58537.1| TOM70 [Saccharomyces cerevisiae]
 gi|125863505|gb|ABN58555.1| TOM70 [Saccharomyces cerevisiae]
 gi|125863537|gb|ABN58582.1| TOM70 [Saccharomyces cerevisiae]
 gi|125863548|gb|ABN58591.1| TOM70 [Saccharomyces cerevisiae]
 gi|125863558|gb|ABN58600.1| TOM70 [Saccharomyces cerevisiae]
 gi|125863598|gb|ABN58636.1| TOM70 [Saccharomyces cerevisiae]
 gi|151944417|gb|EDN62695.1| mitochondrial specialized import receptor of the outer membrane
           [Saccharomyces cerevisiae YJM789]
 gi|207341749|gb|EDZ69718.1| YNL121Cp-like protein [Saccharomyces cerevisiae AWRI1631]
 gi|259149241|emb|CAY82483.1| Tom70p [Saccharomyces cerevisiae EC1118]
 gi|285814534|tpg|DAA10428.1| TPA: Tom70p [Saccharomyces cerevisiae S288c]
 gi|392296871|gb|EIW07972.1| Tom70p [Saccharomyces cerevisiae CEN.PK113-7D]
          Length = 617

 Score = 72.8 bits (177), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 66/250 (26%), Positives = 120/250 (48%), Gaps = 15/250 (6%)

Query: 135 KVNAHIKRAVVHLHAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNL 194
           +VN++I  A++ +   +D T+ +   D+A K+D N +  YY RGQ+  +   Y++A ++ 
Sbjct: 362 RVNSYIYMALI-MADRNDSTEYYNYFDKALKLDSNNSSVYYHRGQMNFILQNYDQAGKDF 420

Query: 195 DKTIALNPNFHVARAQRHFVVHKMIVPGDRERVEQSLKEFRNFVDTHSNVVEACTLFAQV 254
           DK   L+P       Q   + ++     D E +    K  R F +      E    FA++
Sbjct: 421 DKAKELDPENIFPYIQLACLAYRENKFDDCETLFSEAK--RKFPEAP----EVPNFFAEI 474

Query: 255 LVDQEDFDGAEEYFNRSIRVDPENASLYVHRAMLMLQAR--------GNVDEAIKLIEKA 306
           L D+ DFD A + ++ +I ++ +   +YV  A L+ +A          N  EA  L+EKA
Sbjct: 475 LTDKNDFDKALKQYDLAIELENKLDGIYVGIAPLVGKATLLTRNPTVENFIEATNLLEKA 534

Query: 307 ISIDKSCMFAYETLGTIEVQRGRLEEAVKCFNKALPLARDEAELSHIYSLRDAAIAQMKV 366
             +D     A   L  +++Q+  ++EA+  F ++  LAR   E     +  +AA  Q ++
Sbjct: 535 SKLDPRSEQAKIGLAQMKLQQEDIDEAITLFEESADLARTMEEKLQAITFAEAAKVQQRI 594

Query: 367 CERYNIKKKV 376
                + KK+
Sbjct: 595 RSDPVLAKKI 604


>gi|125863495|gb|ABN58546.1| TOM70 [Saccharomyces cerevisiae]
 gi|349580819|dbj|GAA25978.1| K7_Tom70p [Saccharomyces cerevisiae Kyokai no. 7]
          Length = 617

 Score = 72.8 bits (177), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 66/250 (26%), Positives = 120/250 (48%), Gaps = 15/250 (6%)

Query: 135 KVNAHIKRAVVHLHAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNL 194
           +VN++I  A++ +   +D T+ +   D+A K+D N +  YY RGQ+  +   Y++A ++ 
Sbjct: 362 RVNSYIYMALI-MADRNDSTEYYNYFDKALKLDSNNSSVYYHRGQMNFILQNYDQAGKDF 420

Query: 195 DKTIALNPNFHVARAQRHFVVHKMIVPGDRERVEQSLKEFRNFVDTHSNVVEACTLFAQV 254
           DK   L+P       Q   + ++     D E +    K  R F +      E    FA++
Sbjct: 421 DKAKELDPENIFPYIQLACLAYRENKFDDCETLFSEAK--RKFPE----APEVPNFFAEI 474

Query: 255 LVDQEDFDGAEEYFNRSIRVDPENASLYVHRAMLMLQAR--------GNVDEAIKLIEKA 306
           L D+ DFD A + ++ +I ++ +   +YV  A L+ +A          N  EA  L+EKA
Sbjct: 475 LTDKNDFDKALKQYDLAIELENKLDGIYVGIAPLVGKATLLTRNPTVENFIEATNLLEKA 534

Query: 307 ISIDKSCMFAYETLGTIEVQRGRLEEAVKCFNKALPLARDEAELSHIYSLRDAAIAQMKV 366
             +D     A   L  +++Q+  ++EA+  F ++  LAR   E     +  +AA  Q ++
Sbjct: 535 SKLDPRSEQAKIGLAQMKLQQEDIDEAITLFEESADLARTMEEKLQAITFAEAAKVQQRI 594

Query: 367 CERYNIKKKV 376
                + KK+
Sbjct: 595 RSDPVLAKKI 604


>gi|338811928|ref|ZP_08624129.1| TPR repeat-containing protein [Acetonema longum DSM 6540]
 gi|337276073|gb|EGO64509.1| TPR repeat-containing protein [Acetonema longum DSM 6540]
          Length = 298

 Score = 72.8 bits (177), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 53/198 (26%), Positives = 95/198 (47%), Gaps = 9/198 (4%)

Query: 152 DFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNP-NFHVARAQ 210
           D+ KA A   +A  ++P  AD+YY RG  Y   G+Y+ A+ +  + IAL P N    R++
Sbjct: 57  DYNKAIAAYSQAIALNPQYADAYYNRGNAYKNSGEYDNAIADYTQVIALAPQNMDAWRSR 116

Query: 211 RHFVVHKMIVPGDRERVEQSLKEFRNFVDTHSNVVEACTLFAQVLVDQEDFDGAEEYFNR 270
                 K    GD    ++++ ++  F+       EA         D+ D+D A   + R
Sbjct: 117 GDVYAEK----GD---YDKAVTDYTQFIALEPQNAEAHNNRGIAYSDKGDYDTAITDYTR 169

Query: 271 SIRVDPENASLYVHRAMLMLQARGNVDEAIKLIEKAISIDKSCMFAYETLGTIEVQRGRL 330
           +I + P+ A+ Y +R  +  + +G+ D+AI    +AI+++     AY       V +G  
Sbjct: 170 AIALQPKYATAYYNRG-IAYKNKGDYDKAIDDYSQAIALNPRDASAYNNRANAYVMKGDY 228

Query: 331 EEAVKCFNKALPLARDEA 348
           ++A+  ++ A  L  D A
Sbjct: 229 DKAITDYSLATTLDPDYA 246



 Score = 52.0 bits (123), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 48/215 (22%), Positives = 100/215 (46%), Gaps = 12/215 (5%)

Query: 116 KAIEDLTQLVEDTSVDPKIKVNAHIKRAVVHLHAASDFTKAFADLDEAEKVDPNVADSYY 175
           KAI   +Q +   +++P+   +A+  R   + ++  ++  A AD  +   + P   D++ 
Sbjct: 60  KAIAAYSQAI---ALNPQY-ADAYYNRGNAYKNS-GEYDNAIADYTQVIALAPQNMDAWR 114

Query: 176 QRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQRHFVVHKMIVPGDRERVEQSLKEFR 235
            RG +Y   G Y++A+ +  + IAL P      A+ H   ++ I   D+   + ++ ++ 
Sbjct: 115 SRGDVYAEKGDYDKAVTDYTQFIALEPQ----NAEAH--NNRGIAYSDKGDYDTAITDYT 168

Query: 236 NFVDTHSNVVEACTLFAQVLVDQEDFDGAEEYFNRSIRVDPENASLYVHRAMLMLQARGN 295
             +        A         ++ D+D A + ++++I ++P +AS Y +RA   +  +G+
Sbjct: 169 RAIALQPKYATAYYNRGIAYKNKGDYDKAIDDYSQAIALNPRDASAYNNRANAYVM-KGD 227

Query: 296 VDEAIKLIEKAISIDKSCMFAYETLGTIEVQRGRL 330
            D+AI     A ++D     AY        + GRL
Sbjct: 228 YDKAITDYSLATTLDPDYAVAYYNQALACEKAGRL 262



 Score = 47.0 bits (110), Expect = 0.027,   Method: Compositional matrix adjust.
 Identities = 39/185 (21%), Positives = 82/185 (44%), Gaps = 21/185 (11%)

Query: 166 VDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQRHFVVHKMIVPGDRE 225
           V P   + ++ +G  Y     Y +A+    + IALNP +    A  ++         +R 
Sbjct: 37  VKPGAEEHWFNKGLQYDSRQDYNKAIAAYSQAIALNPQY----ADAYY---------NRG 83

Query: 226 RVEQSLKEFRNFVDTHSNVV-------EACTLFAQVLVDQEDFDGAEEYFNRSIRVDPEN 278
              ++  E+ N +  ++ V+       +A      V  ++ D+D A   + + I ++P+N
Sbjct: 84  NAYKNSGEYDNAIADYTQVIALAPQNMDAWRSRGDVYAEKGDYDKAVTDYTQFIALEPQN 143

Query: 279 ASLYVHRAMLMLQARGNVDEAIKLIEKAISIDKSCMFAYETLGTIEVQRGRLEEAVKCFN 338
           A  + +R  +    +G+ D AI    +AI++      AY   G     +G  ++A+  ++
Sbjct: 144 AEAHNNRG-IAYSDKGDYDTAITDYTRAIALQPKYATAYYNRGIAYKNKGDYDKAIDDYS 202

Query: 339 KALPL 343
           +A+ L
Sbjct: 203 QAIAL 207



 Score = 43.1 bits (100), Expect = 0.42,   Method: Compositional matrix adjust.
 Identities = 22/61 (36%), Positives = 34/61 (55%)

Query: 454 NESGQKHAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALN 513
           N+  Q  +  D+ KA A   +A  ++P  AD+YY RG  Y   G+Y+ A+ +  + IAL 
Sbjct: 47  NKGLQYDSRQDYNKAIAAYSQAIALNPQYADAYYNRGNAYKNSGEYDNAIADYTQVIALA 106

Query: 514 P 514
           P
Sbjct: 107 P 107



 Score = 42.7 bits (99), Expect = 0.44,   Method: Compositional matrix adjust.
 Identities = 58/260 (22%), Positives = 101/260 (38%), Gaps = 54/260 (20%)

Query: 263 GAEE-YFNRSIRVDPENASLYVHRAMLMLQARGNVDEAIKLIEKAISIDKSCMFAYETLG 321
           GAEE +FN+ ++ D                +R + ++AI    +AI+++     AY   G
Sbjct: 40  GAEEHWFNKGLQYD----------------SRQDYNKAIAAYSQAIALNPQYADAYYNRG 83

Query: 322 TIEVQRGRLEEAVKCFNKALPLARDEAELSHIYSLRDAAIAQMKV-CERYNIKKKVSPRS 380
                 G  + A+  + + + LA             DA  ++  V  E+ +  K V+  +
Sbjct: 84  NAYKNSGEYDNAIADYTQVIALAPQN---------MDAWRSRGDVYAEKGDYDKAVTDYT 134

Query: 381 QNITKNEKLAIKQLRENNDIIIRPADKGGKTVVMDKADYTQKMTSILNSNDYEIIPGDPT 440
           Q I     L  +    +N+  I  +DKG                      DY+    D T
Sbjct: 135 QFIA----LEPQNAEAHNNRGIAYSDKG----------------------DYDTAITDYT 168

Query: 441 KTIEESEKYGNLENESGQKHA-ASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQY 499
           + I    KY       G  +    D+ KA  D  +A  ++P  A +Y  R   Y + G Y
Sbjct: 169 RAIALQPKYATAYYNRGIAYKNKGDYDKAIDDYSQAIALNPRDASAYNNRANAYVMKGDY 228

Query: 500 EEALRNLDKTIALNPNFHVA 519
           ++A+ +      L+P++ VA
Sbjct: 229 DKAITDYSLATTLDPDYAVA 248



 Score = 41.6 bits (96), Expect = 1.1,   Method: Compositional matrix adjust.
 Identities = 36/135 (26%), Positives = 59/135 (43%), Gaps = 8/135 (5%)

Query: 73  EHEDYLTAIRHCTEEIESTSSNHTKALARLLRATVYIFTSQSTKAIEDLTQLVEDTSVDP 132
           E  DY  A+   T+ I     N   A A   R   Y        AI D T+ +   ++ P
Sbjct: 122 EKGDYDKAVTDYTQFIALEPQN---AEAHNNRGIAYSDKGDYDTAITDYTRAI---ALQP 175

Query: 133 KIKVNAHIKRAVVHLHAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALR 192
           K    A+  R + + +   D+ KA  D  +A  ++P  A +Y  R   Y + G Y++A+ 
Sbjct: 176 KYAT-AYYNRGIAYKNK-GDYDKAIDDYSQAIALNPRDASAYNNRANAYVMKGDYDKAIT 233

Query: 193 NLDKTIALNPNFHVA 207
           +      L+P++ VA
Sbjct: 234 DYSLATTLDPDYAVA 248


>gi|125863588|gb|ABN58627.1| TOM70 [Saccharomyces cerevisiae]
          Length = 617

 Score = 72.8 bits (177), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 66/250 (26%), Positives = 120/250 (48%), Gaps = 15/250 (6%)

Query: 135 KVNAHIKRAVVHLHAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNL 194
           +VN++I  A++ +   +D T+ +   D+A K+D N +  YY RGQ+  +   Y++A ++ 
Sbjct: 362 RVNSYIYMALI-MADRNDSTEYYNYFDKALKLDSNNSSVYYHRGQMNFILQNYDQAGKDF 420

Query: 195 DKTIALNPNFHVARAQRHFVVHKMIVPGDRERVEQSLKEFRNFVDTHSNVVEACTLFAQV 254
           DK   L+P       Q   + ++     D E +    K  R F +      E    FA++
Sbjct: 421 DKAKELDPENIFPYIQLACLAYRENKFDDCETLFSEAK--RKFPEAP----EVPNFFAEI 474

Query: 255 LVDQEDFDGAEEYFNRSIRVDPENASLYVHRAMLMLQAR--------GNVDEAIKLIEKA 306
           L D+ DFD A + ++ +I ++ +   +YV  A L+ +A          N  EA  L+EKA
Sbjct: 475 LTDKNDFDKALKQYDLAIELENKLDGIYVGIAPLVGKATLLTRNPTVENFIEATNLLEKA 534

Query: 307 ISIDKSCMFAYETLGTIEVQRGRLEEAVKCFNKALPLARDEAELSHIYSLRDAAIAQMKV 366
             +D     A   L  +++Q+  ++EA+  F ++  LAR   E     +  +AA  Q ++
Sbjct: 535 SKLDPRSEQAKIGLAQMKLQQEDIDEAITLFEESADLARTMEEKLQAITFAEAAKVQQRI 594

Query: 367 CERYNIKKKV 376
                + KK+
Sbjct: 595 RSDPVLAKKI 604


>gi|4082|emb|CAA29085.1| unnamed protein product [Saccharomyces cerevisiae]
          Length = 617

 Score = 72.8 bits (177), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 66/250 (26%), Positives = 120/250 (48%), Gaps = 15/250 (6%)

Query: 135 KVNAHIKRAVVHLHAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNL 194
           +VN++I  A++ +   +D T+ +   D+A K+D N +  YY RGQ+  +   Y++A ++ 
Sbjct: 362 RVNSYIYMALI-MADRNDSTEYYNYFDKALKLDSNNSSVYYHRGQMNFILQNYDQAGKDF 420

Query: 195 DKTIALNPNFHVARAQRHFVVHKMIVPGDRERVEQSLKEFRNFVDTHSNVVEACTLFAQV 254
           DK   L+P       Q   + ++     D E +    K  R F +      E    FA++
Sbjct: 421 DKAKELDPENIFPYIQLACLAYRENKFDDCETLFSEAK--RKFPEAP----EVPNFFAEI 474

Query: 255 LVDQEDFDGAEEYFNRSIRVDPENASLYVHRAMLMLQAR--------GNVDEAIKLIEKA 306
           L D+ DFD A + ++ +I ++ +   +YV  A L+ +A          N  EA  L+EKA
Sbjct: 475 LTDKNDFDKALKQYDLAIELENKLDGIYVGIAPLVGKATLLTRNPTVENFIEATNLLEKA 534

Query: 307 ISIDKSCMFAYETLGTIEVQRGRLEEAVKCFNKALPLARDEAELSHIYSLRDAAIAQMKV 366
             +D     A   L  +++Q+  ++EA+  F ++  LAR   E     +  +AA  Q ++
Sbjct: 535 SKLDPRSEQAKIGLAQMKLQQEDIDEAITLFEESADLARTMEEKLQAITFAEAAKVQQRI 594

Query: 367 CERYNIKKKV 376
                + KK+
Sbjct: 595 RSDPVLAKKI 604


>gi|254414719|ref|ZP_05028484.1| tetratricopeptide repeat domain protein [Coleofasciculus
           chthonoplastes PCC 7420]
 gi|196178567|gb|EDX73566.1| tetratricopeptide repeat domain protein [Coleofasciculus
           chthonoplastes PCC 7420]
          Length = 942

 Score = 72.4 bits (176), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 76/364 (20%), Positives = 141/364 (38%), Gaps = 78/364 (21%)

Query: 162 EAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQRHFVVHKMIVP 221
           E + ++  +A  ++ +G  Y   GQ+E+A+ + DK + + P+ H A   R          
Sbjct: 5   EGQDINEYLAQQWFNQGCEYFQLGQFEQAIASYDKALQIKPDDHNAWYNR---------- 54

Query: 222 GDRERVEQSLKEFRNFVDTHSNVVEACTLFAQVLVDQEDFDGAEEYFNRSIRVDPENASL 281
                                            L++  +++ A   F ++++  P++   
Sbjct: 55  ------------------------------GTALLNIGEYEEAIASFEKALQFKPDSYEA 84

Query: 282 YVHRAMLMLQARGNVDEAIKLIEKAISIDKSCMFAYETLGTIEVQRGRLEEAVKCFNKAL 341
           +++R  L L   G  +EAI   +KAI I      A+   G    + G  EEA+  ++KA+
Sbjct: 85  WLNRG-LALAKLGEYEEAITFFDKAIQIKPDSYEAWLNRGLALAKLGEYEEAIASYDKAI 143

Query: 342 PLARDEAELSHIYSLRDAAIAQMK-VCERYNIKKKVSPRSQNITKNEKLAIKQLRENNDI 400
            +  D+ E  H + L    + + +     Y+   +  P       N   A+  LRE    
Sbjct: 144 QIKPDKHETWHNWGLVLDDLGEYEEAIASYDKALQCKPDLHETWHNRGAALADLREYEKA 203

Query: 401 IIRPADKGGKTVVMDKADYTQKMTSILNSNDYEIIPGDPTKTIEESEK-YGNLENESGQK 459
           I               A Y + +         +  P D  KT     K  G+L       
Sbjct: 204 I---------------ASYDKAL---------QFKP-DLHKTWHNRGKALGDL------- 231

Query: 460 HAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVA 519
               ++ KA    D+A ++ P+  +++  RG +    G+YE+A+ + DK +   P+FH A
Sbjct: 232 ---GEYEKAIVSYDKALQIKPDKHEAWLSRGLVLAELGEYEKAIASYDKALQFKPDFHDA 288

Query: 520 RAQR 523
              R
Sbjct: 289 WLNR 292



 Score = 65.9 bits (159), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 61/256 (23%), Positives = 105/256 (41%), Gaps = 48/256 (18%)

Query: 151 SDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQ 210
             F +A A  D+A ++ P+  +++Y RG      G+YEEA+ + +K +   P+ + A   
Sbjct: 28  GQFEQAIASYDKALQIKPDDHNAWYNRGTALLNIGEYEEAIASFEKALQFKPDSYEAWLN 87

Query: 211 RHFVVHKMIVPGDRERVEQSLKEFRNFVDTHSNVVEACTLFAQVLVDQEDFDGAEEYFNR 270
           R   + K+   G+ E                    EA T                 +F++
Sbjct: 88  RGLALAKL---GEYE--------------------EAIT-----------------FFDK 107

Query: 271 SIRVDPENASLYVHRAMLMLQARGNVDEAIKLIEKAISIDKSCMFAYETLGTIEVQRGRL 330
           +I++ P++   +++R  L L   G  +EAI   +KAI I       +   G +    G  
Sbjct: 108 AIQIKPDSYEAWLNRG-LALAKLGEYEEAIASYDKAIQIKPDKHETWHNWGLVLDDLGEY 166

Query: 331 EEAVKCFNKALPLARDEAELSHIYSLRDAAIAQMKVCER----YNIKKKVSPRSQNITKN 386
           EEA+  ++KAL    D  E  H    R AA+A ++  E+    Y+   +  P       N
Sbjct: 167 EEAIASYDKALQCKPDLHETWHN---RGAALADLREYEKAIASYDKALQFKPDLHKTWHN 223

Query: 387 EKLAIKQLRENNDIII 402
              A+  L E    I+
Sbjct: 224 RGKALGDLGEYEKAIV 239



 Score = 59.7 bits (143), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 63/250 (25%), Positives = 110/250 (44%), Gaps = 15/250 (6%)

Query: 294 GNVDEAIKLIEKAISIDKSCMFAYETLGTIEVQRGRLEEAVKCFNKALPLARDEAELSHI 353
           G  ++AI   +KA+ I      A+   GT  +  G  EEA+  F KAL    D  E    
Sbjct: 28  GQFEQAIASYDKALQIKPDDHNAWYNRGTALLNIGEYEEAIASFEKALQFKPDSYE---A 84

Query: 354 YSLRDAAIAQMKVCER----YNIKKKVSPRSQNITKNEKLAIKQLRENNDIIIRPADKGG 409
           +  R  A+A++   E     ++   ++ P S     N  LA+ +L E  + I    DK  
Sbjct: 85  WLNRGLALAKLGEYEEAITFFDKAIQIKPDSYEAWLNRGLALAKLGEYEEAIAS-YDKAI 143

Query: 410 KTVVMDKADYTQKMTSILNS-NDYEIIPGDPTKTIE-ESEKYGNLENESGQKHAASDFTK 467
           + +  DK +       +L+   +YE       K ++ + + +    N         ++ K
Sbjct: 144 Q-IKPDKHETWHNWGLVLDDLGEYEEAIASYDKALQCKPDLHETWHNRGAALADLREYEK 202

Query: 468 AFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQRHFVW 527
           A A  D+A +  P++  +++ RG+     G+YE+A+ + DK + + P+ H A   R  V 
Sbjct: 203 AIASYDKALQFKPDLHKTWHNRGKALGDLGEYEKAIVSYDKALQIKPDKHEAWLSRGLV- 261

Query: 528 TSTLAELMAF 537
              LAEL  +
Sbjct: 262 ---LAELGEY 268



 Score = 57.0 bits (136), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 45/210 (21%), Positives = 95/210 (45%), Gaps = 10/210 (4%)

Query: 138 AHIKRAVVHLHAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKT 197
           A + R +  L    ++ +A    D+A ++ P+  +++  RG      G+YEEA+ + DK 
Sbjct: 84  AWLNRGLA-LAKLGEYEEAITFFDKAIQIKPDSYEAWLNRGLALAKLGEYEEAIASYDKA 142

Query: 198 IALNPNFHVARAQRHFVVHKM-IVPGDRERVEQSLKEFRNFVDTHSNVVEACTLFAQVLV 256
           I + P+       +H   H   +V  D    E+++  +   +    ++ E        L 
Sbjct: 143 IQIKPD-------KHETWHNWGLVLDDLGEYEEAIASYDKALQCKPDLHETWHNRGAALA 195

Query: 257 DQEDFDGAEEYFNRSIRVDPENASLYVHRAMLMLQARGNVDEAIKLIEKAISIDKSCMFA 316
           D  +++ A   ++++++  P+    + +R    L   G  ++AI   +KA+ I      A
Sbjct: 196 DLREYEKAIASYDKALQFKPDLHKTWHNRGK-ALGDLGEYEKAIVSYDKALQIKPDKHEA 254

Query: 317 YETLGTIEVQRGRLEEAVKCFNKALPLARD 346
           + + G +  + G  E+A+  ++KAL    D
Sbjct: 255 WLSRGLVLAELGEYEKAIASYDKALQFKPD 284



 Score = 54.7 bits (130), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 44/213 (20%), Positives = 93/213 (43%), Gaps = 8/213 (3%)

Query: 137 NAHIKRAVVHLHAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDK 196
           NA   R    L+   ++ +A A  ++A +  P+  +++  RG      G+YEEA+   DK
Sbjct: 49  NAWYNRGTALLNIG-EYEEAIASFEKALQFKPDSYEAWLNRGLALAKLGEYEEAITFFDK 107

Query: 197 TIALNPNFHVARAQRHFVVHKMIVPGDRERVEQSLKEFRNFVDTHSNVVEACTLFAQVLV 256
            I + P+ + A   R   + K+         E+++  +   +    +  E    +  VL 
Sbjct: 108 AIQIKPDSYEAWLNRGLALAKL------GEYEEAIASYDKAIQIKPDKHETWHNWGLVLD 161

Query: 257 DQEDFDGAEEYFNRSIRVDPENASLYVHRAMLMLQARGNVDEAIKLIEKAISIDKSCMFA 316
           D  +++ A   ++++++  P+    + +R   +   R   ++AI   +KA+         
Sbjct: 162 DLGEYEEAIASYDKALQCKPDLHETWHNRGAALADLR-EYEKAIASYDKALQFKPDLHKT 220

Query: 317 YETLGTIEVQRGRLEEAVKCFNKALPLARDEAE 349
           +   G      G  E+A+  ++KAL +  D+ E
Sbjct: 221 WHNRGKALGDLGEYEKAIVSYDKALQIKPDKHE 253



 Score = 43.1 bits (100), Expect = 0.35,   Method: Compositional matrix adjust.
 Identities = 18/61 (29%), Positives = 34/61 (55%)

Query: 151 SDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQ 210
            ++ KA    D+A ++ P+  +++  RG +    G+YE+A+ + DK +   P+FH A   
Sbjct: 232 GEYEKAIVSYDKALQIKPDKHEAWLSRGLVLAELGEYEKAIASYDKALQFKPDFHDAWLN 291

Query: 211 R 211
           R
Sbjct: 292 R 292


>gi|118376183|ref|XP_001021274.1| SLEI family protein [Tetrahymena thermophila]
 gi|89303041|gb|EAS01029.1| SLEI family protein [Tetrahymena thermophila SB210]
          Length = 2889

 Score = 72.4 bits (176), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 106/476 (22%), Positives = 202/476 (42%), Gaps = 84/476 (17%)

Query: 80  AIRHCTEEIESTSSNHTKALARLLRATVYIFTSQSTKAIEDLTQLVEDTSVDPKIKVNAH 139
           AI+   + IE    N  +A  RL    VY     +++AI+   + +E   +DP    NA 
Sbjct: 198 AIKSLKKAIE-IEPNSVEAYERL--GFVYQNEKNNSEAIKYYKKAIE---IDPNY-YNAQ 250

Query: 140 IKRAVVHLHAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIA 199
              A+++    ++F  +F     A ++DP   D+Y   G IY   G  +EAL +  K + 
Sbjct: 251 FNLALIY-QNQNNFDDSFQCYRRAIEIDPKQVDAYNNIGLIYYYKGMIKEALESYKKALE 309

Query: 200 LNPNFHVARAQRHFVVHKMIVPGDRER-VEQSLKEFRNFVDTHSNVVEACTLFAQVLVDQ 258
           ++P ++ A        H   +  ++E+ ++++++ ++  ++ + + +++ T    + +D 
Sbjct: 310 IDPKYYKA-------YHNSALAYEKEKLIDEAIQCYKKTIEINPSFLKSLTRLGDICIDN 362

Query: 259 EDFDGAEEYFNRSIRVDPEN-------ASLYVHRAMLMLQARGNVDEAIKLIEKAISIDK 311
              D   E F + I++DP++       A LY  + ML+        EAI   +  + I+ 
Sbjct: 363 NLLDEGIECFKKIIQLDPQSYFDHYSLADLYYKKNMLV--------EAINHYKITLEINP 414

Query: 312 SCMFAYETLGTIEVQRGRLEEAVKCFNKALPLARDEAE--------LSHIYSLRDAAIAQ 363
             + A+  LG    ++G LEEA++C+ KA+ L  +  E         SH+ ++++A    
Sbjct: 415 QQLSAHLYLGISYKKQGNLEEALQCYKKAIQLNPNSQEAHFNSGIAYSHLGNVKEALECY 474

Query: 364 MKVCERYNIKKKVSPRSQNITKNEKLAIKQLRENNDIIIRPADKGGKTVVMDKADYTQKM 423
            K  E       ++P+  +   N    +  L  N  I    A K  +T++          
Sbjct: 475 KKALE-------INPKFVSALIN----LGALYTNQKIY-EDAIKCYQTLL---------- 512

Query: 424 TSILNSNDYEIIPGDPTKTIEESEKYG--NLENESGQKHAASDFTKAFADLDEAEKVDPN 481
                             TIEE+   G  NL     QK+    F +A     +  ++DP 
Sbjct: 513 ------------------TIEENNLDGLNNLGYIYSQKNM---FDEAINYFKKVIEIDPT 551

Query: 482 VADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQRHFVWTSTLAELMAF 537
              SYY  G  Y      +EAL   +K   ++P + +   ++  V++    +  AF
Sbjct: 552 YYLSYYNIGVAYESKQMLDEALEYYNKVEEMSPKYFIVFVRQGNVYSQKNMQNEAF 607



 Score = 72.0 bits (175), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 88/407 (21%), Positives = 184/407 (45%), Gaps = 79/407 (19%)

Query: 171  ADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQRHFVVH--KMI---VPGDRE 225
            A+ ++Q+G ++ + G+ +E+++ L + I ++PNF+ A  +  F+    KM    +   ++
Sbjct: 2165 AEEFFQKGFLHYIQGKDDESIQCLQQAIEIDPNFYEAYGKLGFIYQSKKMFDEAIENYKK 2224

Query: 226  RVE---QSLKEFRNFVDTHSN---VVEACTLF-------------AQVLVDQEDFDGAEE 266
             ++   +SL+  RN V+ + N   + E    F               V  D+   D A +
Sbjct: 2225 AIQLSPKSLESIRNIVEIYHNRNMLNEVKEFFNSIPKNTETYYNIGNVFADKYMIDEAID 2284

Query: 267  YFNRSIRVDPENASLYVHRAMLMLQARGNVDEAIKLIEKAISIDKSCMFAYETLGTIEVQ 326
            Y+ ++I+++P++ + Y+      L  +   ++A++   K + I+     AY  +G +  +
Sbjct: 2285 YYQKTIQLNPQHINAYIELGNTYLN-KIQYEKALECYNKIVEINPKQAVAYNNIGLVHFK 2343

Query: 327  RGRLEEAVKCFNKALPLARDEAELSHIYSLRDAAIAQM--KVCERYNIKKKVSPR-SQNI 383
            + + +EA++ +NKAL +  +  +LS+  S       +M  K  E YN   K++P   + +
Sbjct: 2344 QNKYDEAIQFYNKALEVDPN-YDLSYYNSGLVYETKKMNDKALECYNKVLKINPNDKKTL 2402

Query: 384  TKNEKLAIKQLRENNDIIIRPADKGGKTVVMD-KADYTQKMTSILNSNDYEIIPGDPTKT 442
            T+     I+++ EN        DK  + + +D KAD   +     ++ DY I        
Sbjct: 2403 TR-----IQKINEN-------KDKNLEEIEIDLKADKIPQ-----SAKDYFI-------- 2437

Query: 443  IEESEKYGNLENESGQKHAASDFTKAFADLD-----EAEKVDPNVADSYYQRGQIYCLFG 497
                               ++ F K   DL      +A +++PN +++Y + G +Y  + 
Sbjct: 2438 -----------------QGSTYFIKKIKDLSIDCLKKAIEIEPNYSEAYDKLGLVYQYYQ 2480

Query: 498  QYEEALRNLDKTIALNPNFH--VARAQRHFVWTSTLAELMAFSDEFM 542
             YE+A++N  K    NP  +  V      ++   TL E   F ++ +
Sbjct: 2481 MYEDAIQNFQKAFETNPKCYDAVLSLMAIYLEKKTLFEAKEFHNQII 2527



 Score = 65.1 bits (157), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 102/480 (21%), Positives = 202/480 (42%), Gaps = 58/480 (12%)

Query: 55  DTNESHELDLLSKAKRAFEHE--DYLTAIRHCTEEIESTSSNHTKALARLLRATVYIFTS 112
           D N SH    +SKA    E +  D+  +      EI+  ++N  + L    +A   I   
Sbjct: 71  DLNPSHVNAYISKAGIYLEQKILDFAISCLKKVLEIDPYNANAHERLGFTYKAQNLI--- 127

Query: 113 QSTKAIEDLTQLVEDTSVDPKIKVNAHIKRAVVHLHAASDFTKAFADLDEAEKVDPNVAD 172
              +AI+   + +E   +DP     A+    +V+        +A+    +A+ +DP    
Sbjct: 128 --DQAIKCYKKAIE---IDPNC-TEAYHNLGIVY-EGKGLIQQAYQCYLKAQSIDPKYTK 180

Query: 173 SYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQRHFVVHKMIVPGDRERVEQSLK 232
           SY    + Y L  Q ++A+++L K I + PN   A  +  FV        + +   +++K
Sbjct: 181 SYISLARNYYLDFQIQDAIKSLKKAIEIEPNSVEAYERLGFVYQ------NEKNNSEAIK 234

Query: 233 EFRNFVDTHSNVVEACTLFAQVLVDQEDFDGAEEYFNRSIRVDPENASLYVHRAMLMLQA 292
            ++  ++   N   A    A +  +Q +FD + + + R+I +DP+    Y +   L+   
Sbjct: 235 YYKKAIEIDPNYYNAQFNLALIYQNQNNFDDSFQCYRRAIEIDPKQVDAY-NNIGLIYYY 293

Query: 293 RGNVDEAIKLIEKAISIDKSCMFAYETLGTIEVQRGRLEEAVKCFNKALPLARDEAELSH 352
           +G + EA++  +KA+ ID     AY        +   ++EA++C+ K + +  + + L  
Sbjct: 294 KGMIKEALESYKKALEIDPKYYKAYHNSALAYEKEKLIDEAIQCYKKTIEI--NPSFLKS 351

Query: 353 IYSLRDAAIAQMKVCERYNIKKKV---SPRSQNITKNEKLAIKQLRENNDIIIRPADKGG 409
           +  L D  I    + E     KK+    P+S      +  ++  L    ++++   +   
Sbjct: 352 LTRLGDICIDNNLLDEGIECFKKIIQLDPQSY----FDHYSLADLYYKKNMLVEAINHYK 407

Query: 410 KTVVMDKADYTQKMTSILNSNDYEIIPGDPTKTIEESEKYGNLENESGQKHAASDFTKAF 469
            T+ ++     Q++++        +  G   K      K GNLE       A   + KA 
Sbjct: 408 ITLEIN----PQQLSA-------HLYLGISYK------KQGNLE------EALQCYKKAI 444

Query: 470 ADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQRHFVWTS 529
                  +++PN  ++++  G  Y   G  +EAL    K + +NP F  A      ++T+
Sbjct: 445 -------QLNPNSQEAHFNSGIAYSHLGNVKEALECYKKALEINPKFVSALINLGALYTN 497



 Score = 63.2 bits (152), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 87/387 (22%), Positives = 167/387 (43%), Gaps = 67/387 (17%)

Query: 147  LHAASDFTKAFADLD-----EAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALN 201
            +  ++ F K   DL      +A +++PN +++Y + G +Y  +  YE+A++N  K    N
Sbjct: 2437 IQGSTYFIKKIKDLSIDCLKKAIEIEPNYSEAYDKLGLVYQYYQMYEDAIQNFQKAFETN 2496

Query: 202  PNFHVARAQRHFVVHKMIVPGDRERVEQSLKEFRN-FVDTHSNVVEACTLFAQVLVDQED 260
            P  + A      V+  M +  +++ + ++ KEF N  ++ + +V E          ++  
Sbjct: 2497 PKCYDA------VLSLMAIYLEKKTLFEA-KEFHNQIIEKNPDVPELHHKIGVAYQEKSM 2549

Query: 261  FDGAEEYFNRSIRVDPENASLYVHRAMLMLQARGNVDEAIKLIEKAISIDKSCMFAYETL 320
            FD A   F+++I ++P+ A+ Y+    + L+ +   ++A +  EKAI ID   + AY  +
Sbjct: 2550 FDEAITCFSKAIELNPKYANAYIKLGNIYLK-QIKYEKARECYEKAIEIDPKQVVAYNNI 2608

Query: 321  GTIEVQRGRLEEAVKCFNKALPLARDEAELSHIYSLRDAAIA------QMKVCERYNIKK 374
            G +       + A+  + KAL +        +I SL ++ +A        K  E YN   
Sbjct: 2609 GLVYYNLKNDDLALSYYQKALQINP-----RYILSLYNSGLAYEMKNQNQKALEFYNKAL 2663

Query: 375  KVSPRSQNITKNEKLAIKQLRENNDIIIRPADKGGKTVVMDKADYTQKMTSILNSNDYEI 434
            +V P            +K L     ++++    GG                 ++  D + 
Sbjct: 2664 EVDPND----------VKTLTRMTQLLLKT---GG-----------------IDEPDVDN 2693

Query: 435  IPGDPTKTIEESEKYGNLENESGQKHAASDFTKAFAD-----LDEAEKVDPNVADSYYQR 489
            +  D    +++S            K   S +TK   D     L++A ++DPN  ++Y + 
Sbjct: 2694 LLSDFGINVQKSAI-------DYYKQGYSYYTKKMKDQSIKCLNKAIEMDPNFFEAYDKL 2746

Query: 490  GQIYCLFGQYEEALRNLDKTIALNPNF 516
              IY      ++A+ N  K I  NPNF
Sbjct: 2747 ALIYEEKKMLDKAIENYRKAIEKNPNF 2773



 Score = 61.6 bits (148), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 71/302 (23%), Positives = 130/302 (43%), Gaps = 46/302 (15%)

Query: 224 RERVEQSLKEFRNFVDTHSNVVEACTLFAQVLVDQEDFDGAEEYFNRSIRVDPENASLYV 283
           ++ +++SL      +D + + V A    A + ++Q+  D A     + + +DP NA+ + 
Sbjct: 56  KKLIDESLVYLNKVLDLNPSHVNAYISKAGIYLEQKILDFAISCLKKVLEIDPYNANAH- 114

Query: 284 HRAMLMLQARGNVDEAIKLIEKAISIDKSCMFAYETLGTIEVQRGRLEEAVKCFNKALPL 343
            R     +A+  +D+AIK  +KAI ID +C  AY  LG +   +G +++A +C+ KA  +
Sbjct: 115 ERLGFTYKAQNLIDQAIKCYKKAIEIDPNCTEAYHNLGIVYEGKGLIQQAYQCYLKAQSI 174

Query: 344 ----ARDEAELSHIYSLRDAAIAQMKVCERYNIKKKVSPRSQNITKNEKLA-IKQLRENN 398
                +    L+  Y L       +K     ++KK +     ++   E+L  + Q  +NN
Sbjct: 175 DPKYTKSYISLARNYYLDFQIQDAIK-----SLKKAIEIEPNSVEAYERLGFVYQNEKNN 229

Query: 399 DIIIRPADKGGKTVVMDKADYTQKMTSILNSNDYEIIPGDPTKTIEESEKYGNLE-NESG 457
              I+               Y +K   I           DP         Y N + N + 
Sbjct: 230 SEAIK---------------YYKKAIEI-----------DPN--------YYNAQFNLAL 255

Query: 458 QKHAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFH 517
                ++F  +F     A ++DP   D+Y   G IY   G  +EAL +  K + ++P ++
Sbjct: 256 IYQNQNNFDDSFQCYRRAIEIDPKQVDAYNNIGLIYYYKGMIKEALESYKKALEIDPKYY 315

Query: 518 VA 519
            A
Sbjct: 316 KA 317



 Score = 60.1 bits (144), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 38/179 (21%), Positives = 92/179 (51%), Gaps = 7/179 (3%)

Query: 171  ADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQRHFVVHKMIVPGDRERVEQS 230
            A  YY++G  Y      +++++ L+K I ++PNF  A  +   +        +++ ++++
Sbjct: 2706 AIDYYKQGYSYYTKKMKDQSIKCLNKAIEMDPNFFEAYDKLALIYE------EKKMLDKA 2759

Query: 231  LKEFRNFVDTHSNVVEACTLFAQVLVDQEDFDGAEEYFNRSIRVDPENASLYVHRAMLML 290
            ++ +R  ++ + N +        + ++++ FD A   + + + +DP     Y ++A+   
Sbjct: 2760 IENYRKAIEKNPNFINGYNKLGNIYLEKKMFDDAIVCYQKCLEIDPNYYYGYYNQAIAYE 2819

Query: 291  QARGNVDEAIKLIEKAISIDKSCMFAYETLGTIEVQRGRLEEAVKCFNKALPLARDEAE 349
            + + +  +AI   +KAI+ID + + AY  LG I   + +  +++ CF K L +  ++ E
Sbjct: 2820 EKQLD-SQAIYCYKKAINIDPTGINAYINLGMIYQDQEKASKSLSCFKKTLEIDEEDFE 2877



 Score = 59.7 bits (143), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 78/404 (19%), Positives = 180/404 (44%), Gaps = 57/404 (14%)

Query: 171  ADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQRHFVVHKMIVPGDRERVEQS 230
            A+ Y+++G +Y +  +Y+ ++  L K I +NPN+  A  +  F+  +      ++  E++
Sbjct: 1626 AEEYFKQGFLYFMEQKYDMSIECLKKAIEINPNYCDAYERLGFIYEQ------KKMFEEA 1679

Query: 231  LKEFRNFVDTHSNVVEACTLFAQVLVDQEDFDGAEEYFNRSIRVDPENASLYVHRAMLML 290
            +  ++  +  +  +++   +   + ++++  + A+++++   +    N+  Y   A +  
Sbjct: 1680 VIYYKKALQINPKLLKVIKIVMDIYLNKKMVNEAKDFYDSIAK----NSDTYYELAQIY- 1734

Query: 291  QARGNVDEAIKLIEKAISIDKSCMFAYETLGTIEVQRGRLEEAVKCFNKAL------PLA 344
            Q +  +DE+I   +K + ++   + AY +LG++ + +   E+A++C+ K L      P+A
Sbjct: 1735 QNQNMLDESINNYQKVLELNNKDIDAYVSLGSVYLNKLYYEKALECYQKILEINSKEPVA 1794

Query: 345  RDEAELSHIYSLRDAAIAQMKVCERYNIKKKVSPRSQNITKNEKLAI--KQLRENNDIII 402
             +   + H     D         E +N   + +P+ +    N  L    K L+E      
Sbjct: 1795 YNNIGIVHFRQKNDDL-----ALEYFNKALEQNPKYELSLYNSGLVYERKNLKE------ 1843

Query: 403  RPADKGGKTVVMDKADYTQKMTSILN--SNDYEIIPGDPTKTIEESEKYGNLENESGQKH 460
            +  +   K + ++  +  +K  S +N  SND        T  +E  E+  N++ +  +  
Sbjct: 1844 KALECYNKVLALNPTE--KKALSRINALSND--------TDKMEVEEQQQNVQKQDTEFQ 1893

Query: 461  AASDFT-------------KAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLD 507
             A D+              KA     +A ++DP+  ++Y + G +     ++EEA+ +  
Sbjct: 1894 TAKDYLDQGFKYYNKLLDDKAIECYKKALEIDPSYFEAYEKIGLLQKANKKFEEAIESYK 1953

Query: 508  KTIALNPNFHVA--RAQRHFVWTSTLAELMAFSDEFMIPKITYY 549
            K I +NP  + A       ++    ++E  +F D       TYY
Sbjct: 1954 KAIEINPKCYSAIKSVMNIYLDKKMISEAKSFYDSIQKCATTYY 1997



 Score = 58.9 bits (141), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 83/405 (20%), Positives = 163/405 (40%), Gaps = 53/405 (13%)

Query: 130 VDPKIKVNAHIKRAVVHLHAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEE 189
           ++P+ +++AH+   + +     +  +A     +A +++PN  ++++  G  Y   G  +E
Sbjct: 412 INPQ-QLSAHLYLGISY-KKQGNLEEALQCYKKAIQLNPNSQEAHFNSGIAYSHLGNVKE 469

Query: 190 ALRNLDKTIALNPNFHVARAQRHFVVHKMIVPGDRERVEQSLKEFRNFVDTHSNVVEACT 249
           AL    K + +NP F  A      +++   +  +++  E ++K ++  +    N ++   
Sbjct: 470 ALECYKKALEINPKFVSA------LINLGALYTNQKIYEDAIKCYQTLLTIEENNLDGLN 523

Query: 250 LFAQVLVDQEDFDGAEEYFNRSIRVDPENASLYVHRAMLMLQARGNVDEAIKLIEKAISI 309
               +   +  FD A  YF + I +DP    L  +   +  +++  +DEA++   K   +
Sbjct: 524 NLGYIYSQKNMFDEAINYFKKVIEIDP-TYYLSYYNIGVAYESKQMLDEALEYYNKVEEM 582

Query: 310 DKSCMFAYETLGTIEVQRGRLEEAVKCFNKALPLARDEAELSHIYSLRDAAIAQMKVCER 369
                  +   G +  Q+    EA +C+NK       E  L +IYSL             
Sbjct: 583 SPKYFIVFVRQGNVYSQKNMQNEAFQCYNKV-----SEQILKNIYSL------------- 624

Query: 370 YNIKKKVSPRSQNITKNEKLAIKQLRENNDIIIRPADKGGKTVVMDKADYTQKMTSI--- 426
                           +E+L I +        ++ + K  +  V     Y Q   S+   
Sbjct: 625 ----------------SEELEISRAS-----FVQESIKNYEDAVKLNPKYIQFYHSLGLL 663

Query: 427 -LNSNDYEIIPGDPTKTIEESEKYGNLENESGQKHAA-SDFTKAFADLDEAEKVDPNVAD 484
             N N  E         IE   KY N   E G  ++  + + KA   L++A ++D N A 
Sbjct: 664 HSNINQMEEAMRYFQAAIELDPKYINSYLELGNIYSGKAIYDKAQQCLEKALEIDQNSAS 723

Query: 485 SYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQRHFVWTS 529
           +    G  Y      ++AL +  K + +NPN+ +A      V+ S
Sbjct: 724 ALNNFGLFYFTQKMDDKALESFKKALEINPNYELAIYNSGLVYES 768



 Score = 56.6 bits (135), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 117/519 (22%), Positives = 221/519 (42%), Gaps = 100/519 (19%)

Query: 78   LTAIRHCTEEIESTSSNHTKAL--------ARLLRATVYIFTSQSTKAIEDLTQLVEDTS 129
            L  I      ++ + +N+ K L        A +   +VY+      KA+E   +++E  S
Sbjct: 1730 LAQIYQNQNMLDESINNYQKVLELNNKDIDAYVSLGSVYLNKLYYEKALECYQKILEINS 1789

Query: 130  VDPKIKVNAHIKRAVVHLHAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEE 189
             +P     A+    +VH    +D   A    ++A + +P    S Y  G +Y      E+
Sbjct: 1790 KEPV----AYNNIGIVHFRQKND-DLALEYFNKALEQNPKYELSLYNSGLVYERKNLKEK 1844

Query: 190  ALRNLDKTIALNPNFHVARAQRHFVVH---KMIVPGDRERVEQSLKEF---RNFVDT--- 240
            AL   +K +ALNP    A ++ + + +   KM V   ++ V++   EF   ++++D    
Sbjct: 1845 ALECYNKVLALNPTEKKALSRINALSNDTDKMEVEEQQQNVQKQDTEFQTAKDYLDQGFK 1904

Query: 241  -HSNVVE--ACTLFAQVL-VDQEDFDGAE----------------EYFNRSIRVDPENAS 280
             ++ +++  A   + + L +D   F+  E                E + ++I ++P+  S
Sbjct: 1905 YYNKLLDDKAIECYKKALEIDPSYFEAYEKIGLLQKANKKFEEAIESYKKAIEINPKCYS 1964

Query: 281  -------LYVHRAML----------------------MLQARGNVDEAIKLIEKAISIDK 311
                   +Y+ + M+                      + Q +  +DEAI   +KAI  D 
Sbjct: 1965 AIKSVMNIYLDKKMISEAKSFYDSIQKCATTYYEMGIIYQRQNMIDEAISNYQKAIEQDP 2024

Query: 312  SCMFAYETLGTIEVQRGRLEEAVKCFNKALPLARDEA----ELSHIYSLRDAAIAQMKVC 367
                AY  LG   + + + ++A++C+ KAL +  ++      +  IY  ++     +   
Sbjct: 2025 KYKSAYIQLGNSYLDKVQYDQAIECYKKALEIDPNDVIAYNNIGLIYYNQEKIDLAL--- 2081

Query: 368  ERYNIKKKVSPR-------SQNITKNEKLAIKQLRENNDII-IRPADKGG---KTVVMDK 416
            E YN   +++P+       S  I +  KL  K L   N ++ I P ++     K ++ DK
Sbjct: 2082 EYYNKAIEINPKYELPIYNSGLIYEKMKLKEKALECYNKVLEINPTEQKSLKRKKILEDK 2141

Query: 417  ADYTQK-MTSILNSNDYEIIPGDPTKTIEESEKYGNLENESGQKHAASDFTKAFADLDEA 475
               TQK   ++LN  +  II    +K  E  +K G L    G+        ++   L +A
Sbjct: 2142 ---TQKDEFNLLNELNKNIIQNSNSKAEEFFQK-GFLHYIQGKD------DESIQCLQQA 2191

Query: 476  EKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNP 514
             ++DPN  ++Y + G IY     ++EA+ N  K I L+P
Sbjct: 2192 IEIDPNFYEAYGKLGFIYQSKKMFDEAIENYKKAIQLSP 2230



 Score = 53.1 bits (126), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 43/206 (20%), Positives = 96/206 (46%), Gaps = 25/206 (12%)

Query: 160  LDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNF--HVARAQRHFVVHK 217
            L +A ++DPN  ++Y + G +Y     + EA+ N  K I +NPN    +      ++  K
Sbjct: 1112 LKKAIELDPNYFEAYDKLGLVYKERKMFNEAVLNYKKAIEINPNCLNAIKEVMNIYLDRK 1171

Query: 218  MI---------VPGD-------------RERVEQSLKEFRNFVDTHSNVVEACTLFAQVL 255
            M+         VP +             ++ +++S+  ++  ++ +S  ++A        
Sbjct: 1172 MLNEAKEFYDQVPKNLDTYYELAVVYQTQKMLDESIAIYKRIIELNSKYIKAYIQLGNAY 1231

Query: 256  VDQEDFDGAEEYFNRSIRVDPENASLYVHRAMLMLQARGNVDEAIKLIEKAISIDKSCMF 315
            +D+  +D A E + + I +DP+ A  Y +  ++  + +G  DEA++   KAI ++     
Sbjct: 1232 LDKPQYDLALESYQKIIEIDPKKAVAYNNIGLVYFR-QGMNDEALEYFTKAIEVESKYDL 1290

Query: 316  AYETLGTIEVQRGRLEEAVKCFNKAL 341
            +    G +  +  + ++A++ + KA 
Sbjct: 1291 SMYNSGLVYEKMNQKDKALEWYKKAF 1316



 Score = 51.2 bits (121), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 71/346 (20%), Positives = 159/346 (45%), Gaps = 53/346 (15%)

Query: 189  EALRNLDKTIALNPNFHVARAQRHFVVHKMIVPGDRERVEQSLKEFRNFVDTHSNVVEAC 248
            +++R L K I L+PN+  A   R  +VH+     +  R E++++ ++  ++ +    ++ 
Sbjct: 1371 DSIRCLKKAIELDPNYFEAY-DRLGLVHE-----ENNRFEEAIENYKKAIEINPQSFDSI 1424

Query: 249  TLFAQVLVDQEDFDGAEEYFNRSIRVDPENASLYVHRAMLMLQARGNVDEAIKLIEKAIS 308
                 + +D++  + A++++N+     P+ A  Y +   L+ Q +  +DEA++   KAI 
Sbjct: 1425 NSLMNIYLDKKMINEAKDFYNQV----PKCAETY-YEFGLVYQDQKMLDEAVESYLKAIE 1479

Query: 309  IDKSCMFAYETLGTIEVQRGRLEEAVKCFNKALPLARDEA----ELSHIY---SLRDAAI 361
            ++   + A+  LG   + +   ++A++ + K + +   +A     +  +Y    + D A+
Sbjct: 1480 LNPKYINAFIQLGNAYLDKLLFDKAIESYKKIIEIDPSKAIAYNNIGLVYFEQEMNDLAL 1539

Query: 362  AQMKVCERYNIKKKVSPRSQNITKNEKLAIKQLRENNDIIIRPADKGGKTVVMDKADYTQ 421
             Q +     N K ++S  +  +       + + ++ ND  +    K     V++     Q
Sbjct: 1540 EQFQKAIEINPKYELSLYNSGL-------VYERKDQNDKALECYRK-----VLEINPNEQ 1587

Query: 422  KMTSILNSNDYEIIPGDPTKTIEESEKYGNLENESGQKHAASDFTKAFADLDEAEKVDPN 481
            K  S +     +II     KT+  +EK+  L+    QK    +FT               
Sbjct: 1588 KSLSRI-----QIIKQKQNKTL--NEKFDLLK--VLQKKLGKEFTSK------------- 1625

Query: 482  VADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQRHFVW 527
             A+ Y+++G +Y +  +Y+ ++  L K I +NPN+  A  +  F++
Sbjct: 1626 -AEEYFKQGFLYFMEQKYDMSIECLKKAIEINPNYCDAYERLGFIY 1670



 Score = 48.9 bits (115), Expect = 0.008,   Method: Compositional matrix adjust.
 Identities = 63/260 (24%), Positives = 114/260 (43%), Gaps = 19/260 (7%)

Query: 95   HTKALARLLRATVYIFTSQSTKAIEDLTQLVEDTSVDPKIKVNAHIKRAVVHLHAASDFT 154
            H  A   L     Y+   Q  KA+E   ++VE   ++PK  V A+    +VH    + + 
Sbjct: 2296 HINAYIEL--GNTYLNKIQYEKALECYNKIVE---INPKQAV-AYNNIGLVHFKQ-NKYD 2348

Query: 155  KAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQRHFV 214
            +A    ++A +VDPN   SYY  G +Y      ++AL   +K + +NPN      +    
Sbjct: 2349 EAIQFYNKALEVDPNYDLSYYNSGLVYETKKMNDKALECYNKVLKINPNDKKTLTR---- 2404

Query: 215  VHKMIVPGDR--ERVEQSLKEFRNFVDTHSNVVEACTLFAQVLVDQEDFDGAEEYFNRSI 272
            + K+    D+  E +E  LK  +         ++  T F + + D      + +   ++I
Sbjct: 2405 IQKINENKDKNLEEIEIDLKADKIPQSAKDYFIQGSTYFIKKIKDL-----SIDCLKKAI 2459

Query: 273  RVDPENASLYVHRAMLMLQARGNVDEAIKLIEKAISIDKSCMFAYETLGTIEVQRGRLEE 332
             ++P  +  Y  +  L+ Q     ++AI+  +KA   +  C  A  +L  I +++  L E
Sbjct: 2460 EIEPNYSEAY-DKLGLVYQYYQMYEDAIQNFQKAFETNPKCYDAVLSLMAIYLEKKTLFE 2518

Query: 333  AVKCFNKALPLARDEAELSH 352
            A +  N+ +    D  EL H
Sbjct: 2519 AKEFHNQIIEKNPDVPELHH 2538



 Score = 47.8 bits (112), Expect = 0.016,   Method: Compositional matrix adjust.
 Identities = 93/411 (22%), Positives = 172/411 (41%), Gaps = 36/411 (8%)

Query: 117  AIEDLTQLVEDTSVDPKIKVNAHIKRAVVHLHAASDFTKAFADLDEAEKVDPNVADSYYQ 176
            A+E   + +E   ++PK  +NA I+    +L     F KA     +  ++DP+ A +Y  
Sbjct: 1470 AVESYLKAIE---LNPKY-INAFIQLGNAYLDKLL-FDKAIESYKKIIEIDPSKAIAYNN 1524

Query: 177  RGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQRHFVVHKMIVPGDRERVEQSLKEFRN 236
             G +Y      + AL    K I +NP + ++      V  +      +++ +++L+ +R 
Sbjct: 1525 IGLVYFEQEMNDLALEQFQKAIEINPKYELSLYNSGLVYER------KDQNDKALECYRK 1578

Query: 237  FVDTHSNVVEACTLFAQVLVDQ-----EDFDGAEEYFNRSIRVDPENASLYVHRAMLMLQ 291
             ++ + N  ++ +    +   Q     E FD  +    +  +     A  Y  +  L   
Sbjct: 1579 VLEINPNEQKSLSRIQIIKQKQNKTLNEKFDLLKVLQKKLGKEFTSKAEEYFKQGFLYFM 1638

Query: 292  ARGNVDEAIKLIEKAISIDKSCMFAYETLGTIEVQRGRLEEAVKCFNKALPLARDEAELS 351
             +   D +I+ ++KAI I+ +   AYE LG I  Q+   EEAV  + KAL +  +   L 
Sbjct: 1639 EQK-YDMSIECLKKAIEINPNYCDAYERLGFIYEQKKMFEEAVIYYKKALQI--NPKLLK 1695

Query: 352  HIYSLRDAAIAQMKVCERYNIKKKVSPRSQNITKNEKLAIKQLRENNDIIIRPADKGGKT 411
             I  + D  + +  V E  +    ++  S    +     + Q+ +N +++    +   K 
Sbjct: 1696 VIKIVMDIYLNKKMVNEAKDFYDSIAKNSDTYYE-----LAQIYQNQNMLDESINNYQKV 1750

Query: 412  VVMDKAD---YTQKMTSILNSNDYEIIPGDPTKTIEESEKYGNLENESGQKHAASDFTKA 468
            + ++  D   Y    +  LN   YE       K +E + K     N  G  H    F + 
Sbjct: 1751 LELNNKDIDAYVSLGSVYLNKLYYEKALECYQKILEINSKEPVAYNNIGIVH----FRQK 1806

Query: 469  FADL-----DEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNP 514
              DL     ++A + +P    S Y  G +Y      E+AL   +K +ALNP
Sbjct: 1807 NDDLALEYFNKALEQNPKYELSLYNSGLVYERKNLKEKALECYNKVLALNP 1857



 Score = 43.1 bits (100), Expect = 0.37,   Method: Compositional matrix adjust.
 Identities = 73/379 (19%), Positives = 153/379 (40%), Gaps = 31/379 (8%)

Query: 153 FTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQRH 212
           F +A     +  ++DP    SYY  G  Y      +EAL   +K   ++P + +   ++ 
Sbjct: 535 FDEAINYFKKVIEIDPTYYLSYYNIGVAYESKQMLDEALEYYNKVEEMSPKYFIVFVRQG 594

Query: 213 FVVHKMIVPGDRERVEQSLKE--FRNFVDTHSNV-VEACTLFAQVLVDQEDFDGAEEYFN 269
            V  +  +  +  +    + E   +N       + +   +   + + + ED         
Sbjct: 595 NVYSQKNMQNEAFQCYNKVSEQILKNIYSLSEELEISRASFVQESIKNYED--------- 645

Query: 270 RSIRVDPENASLYVHRAMLMLQARGNVDEAIKLIEKAISIDKSCMFAYETLGTIEVQRGR 329
            +++++P+    Y H   L+      ++EA++  + AI +D   + +Y  LG I   +  
Sbjct: 646 -AVKLNPKYIQFY-HSLGLLHSNINQMEEAMRYFQAAIELDPKYINSYLELGNIYSGKAI 703

Query: 330 LEEAVKCFNKALPLARDEAELSHIYSL-------RDAAIAQMKVCERYNIKKKVSPRSQN 382
            ++A +C  KAL + ++ A   + + L        D A+   K     N   +++  +  
Sbjct: 704 YDKAQQCLEKALEIDQNSASALNNFGLFYFTQKMDDKALESFKKALEINPNYELAIYNSG 763

Query: 383 ITKNEKLAIKQLRE--NNDIIIRPADKGGKTVVMDKADYTQKMTSILNSNDYEIIPGDPT 440
           +    K  I +  E   N ++I P DK      + K D   +     N N  EI+  D  
Sbjct: 764 LVYESKNLIDKALECYKNVLLINPTDKKA----LSKIDQLNQKDGKNNVNLEEILQ-DAN 818

Query: 441 KTIEESEKYGNLENESGQKHAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYE 500
           K ++ ++   +   +    +      K+   L +A ++DP   D+Y + G +Y       
Sbjct: 819 KNLKSAK---DFYQQGFVYYIQRKDAKSIECLKKAIELDPKYFDAYDKLGLLYKEKKMIS 875

Query: 501 EALRNLDKTIALNPNFHVA 519
           +A+ +  K   +NP ++ A
Sbjct: 876 QAIESYKKAFEINPKYYSA 894



 Score = 42.7 bits (99), Expect = 0.52,   Method: Compositional matrix adjust.
 Identities = 57/253 (22%), Positives = 104/253 (41%), Gaps = 54/253 (21%)

Query: 92   SSNHTKALARLLRATVYIFTSQSTKAIEDLTQLVEDTSVDPKIKVNAHIKRAVVHLHAAS 151
            +S + KA  +L     Y+   Q   A+E   +++E   +DPK K  A+    +V+     
Sbjct: 1217 NSKYIKAYIQL--GNAYLDKPQYDLALESYQKIIE---IDPK-KAVAYNNIGLVYFRQGM 1270

Query: 152  DFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQR 211
            +  +A     +A +V+     S Y  G +Y    Q ++AL    K  A NPN   + ++ 
Sbjct: 1271 N-DEALEYFTKAIEVESKYDLSMYNSGLVYEKMNQKDKALEWYKKAFAANPNNKKSLSRI 1329

Query: 212  HFVVHKMIVPG-DRERVEQSLKEFRNFVDTHSNVVEACTLFAQVLVDQEDFDGAEEYFNR 270
             F+  K   P  D E  E +L+                               A++Y+ +
Sbjct: 1330 EFLSKKKEDPTIDLENQESNLQ------------------------------TAKDYYEQ 1359

Query: 271  SIRVDPENASLYVHRAMLMLQARGNVDEAIKLIEKAISIDKSCMFAYETLGTIEVQRGRL 330
            SI+   +   L                ++I+ ++KAI +D +   AY+ LG +  +  R 
Sbjct: 1360 SIKYYNQIKDL----------------DSIRCLKKAIELDPNYFEAYDRLGLVHEENNRF 1403

Query: 331  EEAVKCFNKALPL 343
            EEA++ + KA+ +
Sbjct: 1404 EEAIENYKKAIEI 1416



 Score = 42.4 bits (98), Expect = 0.69,   Method: Compositional matrix adjust.
 Identities = 38/187 (20%), Positives = 78/187 (41%), Gaps = 42/187 (22%)

Query: 168  PNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQRHFVVHKMIVPGDRERV 227
            P   ++YY  G ++      +EA+    KTI LNP                         
Sbjct: 2260 PKNTETYYNIGNVFADKYMIDEAIDYYQKTIQLNP------------------------- 2294

Query: 228  EQSLKEFRNFVDTHSNVVEACTLFAQVLVDQEDFDGAEEYFNRSIRVDPENASLYVHRAM 287
             Q +  +    +T+ N ++              ++ A E +N+ + ++P+ A  Y +  +
Sbjct: 2295 -QHINAYIELGNTYLNKIQ--------------YEKALECYNKIVEINPKQAVAYNNIGL 2339

Query: 288  LMLQARGNVDEAIKLIEKAISIDKSCMFAYETLGTIEVQRGRLEEAVKCFNKALPL-ARD 346
            +  + +   DEAI+   KA+ +D +   +Y   G +   +   ++A++C+NK L +   D
Sbjct: 2340 VHFK-QNKYDEAIQFYNKALEVDPNYDLSYYNSGLVYETKKMNDKALECYNKVLKINPND 2398

Query: 347  EAELSHI 353
            +  L+ I
Sbjct: 2399 KKTLTRI 2405



 Score = 40.8 bits (94), Expect = 2.0,   Method: Compositional matrix adjust.
 Identities = 88/461 (19%), Positives = 186/461 (40%), Gaps = 91/461 (19%)

Query: 130 VDPKIKVNAHIKRAVVHLHAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEE 189
           +DPK +V+A+    +++ +      +A     +A ++DP    +Y+     Y      +E
Sbjct: 276 IDPK-QVDAYNNIGLIYYYKGM-IKEALESYKKALEIDPKYYKAYHNSALAYEKEKLIDE 333

Query: 190 ALRNLDKTIALNPNF--HVARAQRHFVVHKMIVPG------------------------- 222
           A++   KTI +NP+F   + R     + + ++  G                         
Sbjct: 334 AIQCYKKTIEINPSFLKSLTRLGDICIDNNLLDEGIECFKKIIQLDPQSYFDHYSLADLY 393

Query: 223 -DRERVEQSLKEFRNFVDTHSNVVEACTLFAQVLVDQEDFDGAEEYFNRSIRVDPENASL 281
             +  + +++  ++  ++ +   + A          Q + + A + + ++I+++P +   
Sbjct: 394 YKKNMLVEAINHYKITLEINPQQLSAHLYLGISYKKQGNLEEALQCYKKAIQLNPNSQEA 453

Query: 282 YVHRAMLMLQARGNVDEAIKLIEKAISIDKSCMFAYETLGTIEVQRGRLEEAVKCFNKAL 341
           + +   +     GNV EA++  +KA+ I+   + A   LG +   +   E+A+KC+   L
Sbjct: 454 HFNSG-IAYSHLGNVKEALECYKKALEINPKFVSALINLGALYTNQKIYEDAIKCYQTLL 512

Query: 342 PLARDEAE----LSHIYS---LRDAAIAQMK----------------------------V 366
            +  +  +    L +IYS   + D AI   K                             
Sbjct: 513 TIEENNLDGLNNLGYIYSQKNMFDEAINYFKKVIEIDPTYYLSYYNIGVAYESKQMLDEA 572

Query: 367 CERYNIKKKVSPR------------SQNITKNEKLAIKQLRENNDIIIRPADKGGKTVVM 414
            E YN  +++SP+            SQ   +NE  A +   + ++ I++      + + +
Sbjct: 573 LEYYNKVEEMSPKYFIVFVRQGNVYSQKNMQNE--AFQCYNKVSEQILKNIYSLSEELEI 630

Query: 415 DKADYTQKMTSILNSNDYEIIPGDPTKTIEESEKYGNLENESGQKHAASDFTKAFADLDE 474
            +A + Q+  SI N  D   +  +P K I+     G L +   Q   A  + +A      
Sbjct: 631 SRASFVQE--SIKNYED--AVKLNP-KYIQFYHSLGLLHSNINQMEEAMRYFQA------ 679

Query: 475 AEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPN 515
           A ++DP   +SY + G IY     Y++A + L+K + ++ N
Sbjct: 680 AIELDPKYINSYLELGNIYSGKAIYDKAQQCLEKALEIDQN 720



 Score = 39.7 bits (91), Expect = 4.3,   Method: Compositional matrix adjust.
 Identities = 43/217 (19%), Positives = 104/217 (47%), Gaps = 15/217 (6%)

Query: 130 VDPKIKVNAHIKRAVVHLHAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEE 189
           +DPK  +N++++   ++    + + KA   L++A ++D N A +    G  Y      ++
Sbjct: 683 LDPKY-INSYLELGNIY-SGKAIYDKAQQCLEKALEIDQNSASALNNFGLFYFTQKMDDK 740

Query: 190 ALRNLDKTIALNPNFHVARAQRHFVVHKMIVPGDRERVEQSLKEFRNFVDTHSNVVEACT 249
           AL +  K + +NPN+ +A      + +  +V   +  ++++L+ ++N +  +    +A +
Sbjct: 741 ALESFKKALEINPNYELA------IYNSGLVYESKNLIDKALECYKNVLLINPTDKKALS 794

Query: 250 LFAQVLVDQEDFDG---AEEYFNRSIRVDPENASLYVHRAMLMLQARGNVDEAIKLIEKA 306
              Q+  +Q+D       EE    + +        Y    +  +Q +    ++I+ ++KA
Sbjct: 795 KIDQL--NQKDGKNNVNLEEILQDANKNLKSAKDFYQQGFVYYIQRKD--AKSIECLKKA 850

Query: 307 ISIDKSCMFAYETLGTIEVQRGRLEEAVKCFNKALPL 343
           I +D     AY+ LG +  ++  + +A++ + KA  +
Sbjct: 851 IELDPKYFDAYDKLGLLYKEKKMISQAIESYKKAFEI 887


>gi|312115296|ref|YP_004012892.1| hypothetical protein Rvan_2578 [Rhodomicrobium vannielii ATCC
           17100]
 gi|311220425|gb|ADP71793.1| Tetratricopeptide TPR_1 repeat-containing protein [Rhodomicrobium
           vannielii ATCC 17100]
          Length = 338

 Score = 72.4 bits (176), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 77/277 (27%), Positives = 121/277 (43%), Gaps = 25/277 (9%)

Query: 72  FEHEDYLTAIRHCTEEIESTSSNHTKALARLLRATVYIFTSQSTKAIEDLTQLVEDTSVD 131
            + ED   AI  CT  IE+ +   T   AR      Y  T   T+AI D T+ +E    D
Sbjct: 53  LQDEDSRLAISACTALIEAKAPTPTAFSAR---GDAYRATGDFTRAIADYTKALEFEPRD 109

Query: 132 PKI--KVNAHIKRAVVHLHAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEE 189
            ++  K    + R  +   AA D TKA        ++D  +  +Y+ RG+++   G    
Sbjct: 110 AEVLYKRGLALTRQGLLGRAADDLTKAI-------EIDRKLDGAYFARGEVFRAQGNLSR 162

Query: 190 ALRNLDKTIALNPN---FHVARAQRHFVVHKMIVPGDRERVEQSLKEFRNFVDTHSNVVE 246
           AL + D  +A+NP     H+AR      V++    GDR R   ++ EF   +  +    +
Sbjct: 163 ALSDYDAALAINPRATWVHLARG----AVYRG--SGDRLR---AIAEFSTAIKINPESAD 213

Query: 247 ACTLFAQVLVDQEDFDGAEEYFNRSIRVDPENASLYVHRAMLMLQARGNVDEAIKLIEKA 306
           A    A VL D   FD A   ++R I + P++A  Y +R      + G+   A+    KA
Sbjct: 214 AYFERANVLRDMALFDSAITDYSRFIELRPKDADAYNNRGW-AYYSMGDAARALDDANKA 272

Query: 307 ISIDKSCMFAYETLGTIEVQRGRLEEAVKCFNKALPL 343
           ++I        +T G +    GR +EA   +  AL L
Sbjct: 273 LTIRPFDPDLLDTRGHVLEFVGRRDEAAADYQNALRL 309


>gi|254412800|ref|ZP_05026573.1| tetratricopeptide repeat domain protein [Coleofasciculus
           chthonoplastes PCC 7420]
 gi|196180535|gb|EDX75526.1| tetratricopeptide repeat domain protein [Coleofasciculus
           chthonoplastes PCC 7420]
          Length = 595

 Score = 72.4 bits (176), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 70/279 (25%), Positives = 117/279 (41%), Gaps = 15/279 (5%)

Query: 72  FEHEDYLTAIRHCTEEIESTSSNHTKALARLLRATVYIFTSQSTKAIEDLTQLVEDTSVD 131
           ++   Y  AI    + I+    N   A A   R  V        +A+ D TQ +E    D
Sbjct: 318 YQLNQYKAAIADLDQAIQLNPQN---AQAYAARGLVLSAMGNQQEAMADYTQAIEYNPND 374

Query: 132 PKIKVNAHIKRAVVHLHAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEAL 191
            K    A+  R     H A D+  A  D  +A  +DP  + +Y  R Q     G Y +A+
Sbjct: 375 AK----AYYNRGRTRFHLA-DYRGAVDDYTQAIAIDPTDSMAYTNRCQAKFNLGNYRDAI 429

Query: 192 RNLDKTIALNPNFHVARAQRHFVVHKMIVPGDRERVEQSLKEFRNFVDTHSNVVEACTLF 251
            +  + I  NPN H+A   R  + H  +     +  +++LK+    +    +   A    
Sbjct: 430 ADCTEAITQNPNNHIAYNNR-CIAHLNL-----KDYQKALKDCSQSIRIEPSYENAYINR 483

Query: 252 AQVLVDQEDFDGAEEYFNRSIRVDPENASLYVHRAMLMLQARGNVDEAIKLIEKAISIDK 311
            ++     D  GA E + ++IR++P N+  Y +RA +  +  G+   A+    KAI ++ 
Sbjct: 484 GEIRRKLGDNQGALEDYTQAIRLNPNNSVAYTNRARVRRKF-GDNSGALDDYTKAIQLNP 542

Query: 312 SCMFAYETLGTIEVQRGRLEEAVKCFNKALPLARDEAEL 350
           +  FAY   G    + G   EA+  F +A  L  D   +
Sbjct: 543 NNAFAYSGRGLTHAELGNTMEAINDFEQASKLHLDNGRI 581



 Score = 71.6 bits (174), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 94/408 (23%), Positives = 163/408 (39%), Gaps = 43/408 (10%)

Query: 133 KIKVNAHIKRAVVHLHAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALR 192
           +IK     ++ V HL +  +   A    DE+ +++PN   +Y  RG  Y   G ++ A+ 
Sbjct: 202 RIKAQEFFEQGVEHLKSG-NVQGAIEAFDESIQLNPNNPLAYGNRGIAYDDLGAHQAAVE 260

Query: 193 NLDKTIALNPNFHVARAQRHFVVHKMIVPGDRERVEQSLKEFRNFVDTHSNVVEACTLFA 252
           +  K I L P+   A  QR    +      D E  + ++++F   +   SN  +A     
Sbjct: 261 DYTKLIELAPSNTDAYYQRGLARY------DLEDWQGAVEDFTELIQRKSNDDQAYYHRG 314

Query: 253 QVLVDQEDFDGAEEYFNRSIRVDPENASLYVHRAMLMLQARGNVDEAIKLIEKAISIDKS 312
                   +  A    +++I+++P+NA  Y  R  L+L A GN  EA+    +AI  + +
Sbjct: 315 IANYQLNQYKAAIADLDQAIQLNPQNAQAYAARG-LVLSAMGNQQEAMADYTQAIEYNPN 373

Query: 313 CMFAYETLGTIEVQRGRLEEAVKCFNKALPLARDEAELSHIYSLRDAAIAQMKVCERYNI 372
              AY   G           AV  + +A+ +   +   S  Y+ R  A   +      N 
Sbjct: 374 DAKAYYNRGRTRFHLADYRGAVDDYTQAIAI---DPTDSMAYTNRCQAKFNLG-----NY 425

Query: 373 KKKVSPRSQNITKNEKLAIKQLRENNDIIIRPADKGGKTVVMDKADYTQKMTSILNSNDY 432
           +  ++  ++ IT+N          NN I                  Y  +  + LN  DY
Sbjct: 426 RDAIADCTEAITQNP---------NNHIA-----------------YNNRCIAHLNLKDY 459

Query: 433 EIIPGDPTKTIEESEKYGNLENESGQ-KHAASDFTKAFADLDEAEKVDPNVADSYYQRGQ 491
           +    D +++I     Y N     G+ +    D   A  D  +A +++PN + +Y  R +
Sbjct: 460 QKALKDCSQSIRIEPSYENAYINRGEIRRKLGDNQGALEDYTQAIRLNPNNSVAYTNRAR 519

Query: 492 IYCLFGQYEEALRNLDKTIALNPNFHVARAQRHFVWTSTLAELMAFSD 539
           +   FG    AL +  K I LNPN   A + R          + A +D
Sbjct: 520 VRRKFGDNSGALDDYTKAIQLNPNNAFAYSGRGLTHAELGNTMEAIND 567



 Score = 62.0 bits (149), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 58/229 (25%), Positives = 102/229 (44%), Gaps = 12/229 (5%)

Query: 89  ESTSSNHTKALARLLRATVYIFTSQSTKAIEDLTQLVEDTSVDPKIKVNAHIKRAVVHLH 148
           ES   N    LA   R   Y        A+ED T+L+E   + P    +A+ +R +   +
Sbjct: 230 ESIQLNPNNPLAYGNRGIAYDDLGAHQAAVEDYTKLIE---LAPS-NTDAYYQRGLAR-Y 284

Query: 149 AASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVAR 208
              D+  A  D  E  +   N   +YY RG       QY+ A+ +LD+ I LNP    A 
Sbjct: 285 DLEDWQGAVEDFTELIQRKSNDDQAYYHRGIANYQLNQYKAAIADLDQAIQLNPQNAQAY 344

Query: 209 AQRHFVVHKMIVPGDRERVEQSLKEFRNFVDTHSNVVEACTLFAQVLVDQEDFDGAEEYF 268
           A R  V+  M   G++   ++++ ++   ++ + N  +A     +      D+ GA + +
Sbjct: 345 AARGLVLSAM---GNQ---QEAMADYTQAIEYNPNDAKAYYNRGRTRFHLADYRGAVDDY 398

Query: 269 NRSIRVDPENASLYVHRAMLMLQARGNVDEAIKLIEKAISIDKSCMFAY 317
            ++I +DP ++  Y +R        GN  +AI    +AI+ + +   AY
Sbjct: 399 TQAIAIDPTDSMAYTNRCQAKFNL-GNYRDAIADCTEAITQNPNNHIAY 446



 Score = 58.2 bits (139), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 57/234 (24%), Positives = 108/234 (46%), Gaps = 26/234 (11%)

Query: 117 AIEDLTQLVEDTSVDPKIKVNAHIKRAVVHLHAASDFTKAFADLDEAEKVDPNVADSYYQ 176
           A+ED T+L++  S D +    A+  R + + +  + +  A ADLD+A +++P  A +Y  
Sbjct: 292 AVEDFTELIQRKSNDDQ----AYYHRGIAN-YQLNQYKAAIADLDQAIQLNPQNAQAYAA 346

Query: 177 RGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQRHFVVHKMIVPGDRERVEQSLKEFRN 236
           RG +    G  +EA+ +  + I  NPN     A+ ++         +R R    L ++R 
Sbjct: 347 RGLVLSAMGNQQEAMADYTQAIEYNPN----DAKAYY---------NRGRTRFHLADYRG 393

Query: 237 FVDTHSNVVE-------ACTLFAQVLVDQEDFDGAEEYFNRSIRVDPENASLYVHRAMLM 289
            VD ++  +        A T   Q   +  ++  A      +I  +P N   Y +R +  
Sbjct: 394 AVDDYTQAIAIDPTDSMAYTNRCQAKFNLGNYRDAIADCTEAITQNPNNHIAYNNRCIAH 453

Query: 290 LQARGNVDEAIKLIEKAISIDKSCMFAYETLGTIEVQRGRLEEAVKCFNKALPL 343
           L  + +  +A+K   ++I I+ S   AY   G I  + G  + A++ + +A+ L
Sbjct: 454 LNLK-DYQKALKDCSQSIRIEPSYENAYINRGEIRRKLGDNQGALEDYTQAIRL 506



 Score = 52.4 bits (124), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 56/241 (23%), Positives = 96/241 (39%), Gaps = 49/241 (20%)

Query: 66  SKAKRAFEHEDYLTAIRHCTEEIESTSSNHTKALARLLRATVYIFTSQSTKAIEDLTQLV 125
           ++ +  F   DY  A+   T+ I   + + T ++A   R            AI D T+ +
Sbjct: 380 NRGRTRFHLADYRGAVDDYTQAI---AIDPTDSMAYTNRCQAKFNLGNYRDAIADCTEAI 436

Query: 126 EDTSVDPKIKVNAHIKRAVVHLHAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFG 185
              + +P   + A+  R + HL+   D+ KA  D  ++ +++P+  ++Y  RG+I    G
Sbjct: 437 ---TQNPNNHI-AYNNRCIAHLNL-KDYQKALKDCSQSIRIEPSYENAYINRGEIRRKLG 491

Query: 186 QYEEALRNLDKTIALNPNFHVARAQRHFVVHKMIVPGDRERVEQSLKEFRNFVDTHSNVV 245
             + AL +  + I LNPN  VA   R  V  K                            
Sbjct: 492 DNQGALEDYTQAIRLNPNNSVAYTNRARVRRKF--------------------------- 524

Query: 246 EACTLFAQVLVDQEDFDGAEEYFNRSIRVDPENASLYVHRAMLMLQARGNVDEAIKLIEK 305
                         D  GA + + ++I+++P NA  Y  R +   +  GN  EAI   E+
Sbjct: 525 -------------GDNSGALDDYTKAIQLNPNNAFAYSGRGLTHAEL-GNTMEAINDFEQ 570

Query: 306 A 306
           A
Sbjct: 571 A 571


>gi|333997950|ref|YP_004530562.1| hypothetical protein TREPR_2517 [Treponema primitia ZAS-2]
 gi|333738980|gb|AEF84470.1| tetratricopeptide repeat protein [Treponema primitia ZAS-2]
          Length = 349

 Score = 72.4 bits (176), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 74/307 (24%), Positives = 128/307 (41%), Gaps = 70/307 (22%)

Query: 254 VLVDQEDFDGAEEYFNRSIRVDPENASLYVHRAMLML------QARGNVDEAIKLIEK-- 305
           +  D++++D A  Y+N++IR++P  A  Y +R ++ +       A  +  EAI+L +   
Sbjct: 42  IFADRKEYDRAIGYYNQAIRLNPYYAEAYNNRGVVYVIKGEYTWAMADYTEAIRLKQNYT 101

Query: 306 -------------------------AISIDKSCMFAYETLGTIEVQRGRLEEAVKCFNKA 340
                                    AI++D +   AY   G I +++G  ++A+  FN+A
Sbjct: 102 FAYNNRGLLFTEIGDYERARNDFTMAITMDPNYAKAYRNRGEIHLRKGEYDQAILDFNQA 161

Query: 341 LPLARDEAELSHIYSLRDAAIAQM----KVCERYNIKKKVSPRSQNITKNEKLAIKQLRE 396
           + L+   A+    +  R  A A      K    YN   +++P       N        R 
Sbjct: 162 VRLSPGYAKA---FGSRGDAYANKGEYDKAVADYNQAIRINPNYVEALIN--------RG 210

Query: 397 NNDIIIRPADKGGKTVVMDKADYTQKMTSILNSNDYEIIPGDPTKTIEESEKYGNLENES 456
           N    +   D+        K DY + ++  LN+      P  P         Y N     
Sbjct: 211 NIYYDVGYPDRA-------KVDYDRVISINLNAG-----PDLPRAYSNRGVAYNNR---- 254

Query: 457 GQKHAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNF 516
                  D+ KA AD +EA K++PN+A +Y  RG +Y   G+Y  A+ + ++ I +NPN+
Sbjct: 255 ------GDYGKAIADYNEAIKLNPNLALAYRHRGAVYANIGEYRLAIDDFNRAIEINPNY 308

Query: 517 HVARAQR 523
             A   R
Sbjct: 309 ATAYISR 315



 Score = 68.6 bits (166), Expect = 9e-09,   Method: Compositional matrix adjust.
 Identities = 56/247 (22%), Positives = 112/247 (45%), Gaps = 22/247 (8%)

Query: 104 RATVYIFTSQSTKAIEDLTQLVEDTSVDPKIKVN---AHIKRAVVHLHAASDFTKAFADL 160
           R  VY+   + T A+ D T+ +       ++K N   A+  R ++      D+ +A  D 
Sbjct: 73  RGVVYVIKGEYTWAMADYTEAI-------RLKQNYTFAYNNRGLLFTEI-GDYERARNDF 124

Query: 161 DEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQRHFVVHKMIV 220
             A  +DPN A +Y  RG+I+   G+Y++A+ + ++ + L+P +  A   R         
Sbjct: 125 TMAITMDPNYAKAYRNRGEIHLRKGEYDQAILDFNQAVRLSPGYAKAFGSRGDAY----- 179

Query: 221 PGDRERVEQSLKEFRNFVDTHSNVVEACTLFAQVLVDQEDFDGAEEYFNRSIRVD----P 276
             ++   ++++ ++   +  + N VEA      +  D    D A+  ++R I ++    P
Sbjct: 180 -ANKGEYDKAVADYNQAIRINPNYVEALINRGNIYYDVGYPDRAKVDYDRVISINLNAGP 238

Query: 277 ENASLYVHRAMLMLQARGNVDEAIKLIEKAISIDKSCMFAYETLGTIEVQRGRLEEAVKC 336
           +    Y +R  +    RG+  +AI    +AI ++ +   AY   G +    G    A+  
Sbjct: 239 DLPRAYSNRG-VAYNNRGDYGKAIADYNEAIKLNPNLALAYRHRGAVYANIGEYRLAIDD 297

Query: 337 FNKALPL 343
           FN+A+ +
Sbjct: 298 FNRAIEI 304



 Score = 57.4 bits (137), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 40/137 (29%), Positives = 69/137 (50%), Gaps = 13/137 (9%)

Query: 76  DYLTAIRHCTEEIESTSSNHTKALARLLRATVYIFTSQSTKAIEDLTQLVE-DTSVDPKI 134
           DY  AIR         + N+ +AL  + R  +Y       +A  D  +++  + +  P +
Sbjct: 191 DYNQAIR--------INPNYVEAL--INRGNIYYDVGYPDRAKVDYDRVISINLNAGPDL 240

Query: 135 KVNAHIKRAVVHLHAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNL 194
              A+  R V + +   D+ KA AD +EA K++PN+A +Y  RG +Y   G+Y  A+ + 
Sbjct: 241 P-RAYSNRGVAY-NNRGDYGKAIADYNEAIKLNPNLALAYRHRGAVYANIGEYRLAIDDF 298

Query: 195 DKTIALNPNFHVARAQR 211
           ++ I +NPN+  A   R
Sbjct: 299 NRAIEINPNYATAYISR 315



 Score = 56.2 bits (134), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 71/347 (20%), Positives = 140/347 (40%), Gaps = 40/347 (11%)

Query: 172 DSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQRHFVVHKMIVPGDRERVEQSL 231
           D Y  RG I+    +Y+ A+   ++ I LNP +  A   R  V    ++ G+      ++
Sbjct: 34  DEYLNRGIIFADRKEYDRAIGYYNQAIRLNPYYAEAYNNRGVV---YVIKGE---YTWAM 87

Query: 232 KEFRNFVDTHSNVVEACTLFAQVLVDQEDFDGAEEYFNRSIRVDPENASLYVHRAMLMLQ 291
            ++   +    N   A      +  +  D++ A   F  +I +DP  A  Y +R  + L+
Sbjct: 88  ADYTEAIRLKQNYTFAYNNRGLLFTEIGDYERARNDFTMAITMDPNYAKAYRNRGEIHLR 147

Query: 292 ARGNVDEAIKLIEKAISIDKSCMFAYETLGTIEVQRGRLEEAVKCFNKALPLARDEAELS 351
            +G  D+AI    +A+ +      A+ + G     +G  ++AV  +N+A+ +  +  E  
Sbjct: 148 -KGEYDQAILDFNQAVRLSPGYAKAFGSRGDAYANKGEYDKAVADYNQAIRINPNYVE-- 204

Query: 352 HIYSLRDAAIAQMKVCERYNIKKKVS-PRSQNITKNEKLAIKQLRENNDIIIRPADKGGK 410
                         +  R NI   V  P    +  +  ++I  L    D+    +++G  
Sbjct: 205 -------------ALINRGNIYYDVGYPDRAKVDYDRVISI-NLNAGPDLPRAYSNRG-- 248

Query: 411 TVVMDKADYTQKMTSILNSNDY-EIIPGDPTKTIEESEKYGNLENESGQKHAASDFTKAF 469
               ++ DY + +       DY E I  +P   +    +     N    + A  DF +A 
Sbjct: 249 VAYNNRGDYGKAIA------DYNEAIKLNPNLALAYRHRGAVYANIGEYRLAIDDFNRAI 302

Query: 470 ADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNF 516
                  +++PN A +Y  RG+     G+Y +A  +  + + +N  +
Sbjct: 303 -------EINPNYATAYISRGKALSYLGEYAQAQIDYHQAVRINTKY 342


>gi|323303404|gb|EGA57200.1| Tom70p [Saccharomyces cerevisiae FostersB]
          Length = 464

 Score = 72.4 bits (176), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 66/250 (26%), Positives = 120/250 (48%), Gaps = 15/250 (6%)

Query: 135 KVNAHIKRAVVHLHAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNL 194
           +VN++I  A++ +   +D T+ +   D+A K+D N +  YY RGQ+  +   Y++A ++ 
Sbjct: 209 RVNSYIYMALI-MADRNDSTEYYNYFDKALKLDSNNSSVYYHRGQMNFILQNYDQAGKDF 267

Query: 195 DKTIALNPNFHVARAQRHFVVHKMIVPGDRERVEQSLKEFRNFVDTHSNVVEACTLFAQV 254
           DK   L+P       Q   + ++     D E +    K  R F +      E    FA++
Sbjct: 268 DKAKELDPENIFPYIQLACLAYRENKFDDCETLFSEAK--RKFPEAP----EVPNFFAEI 321

Query: 255 LVDQEDFDGAEEYFNRSIRVDPENASLYVHRAMLMLQAR--------GNVDEAIKLIEKA 306
           L D+ DFD A + ++ +I ++ +   +YV  A L+ +A          N  EA  L+EKA
Sbjct: 322 LTDKNDFDKALKQYDLAIELENKLDGIYVGIAPLVGKATLLTRNPTVENFIEATNLLEKA 381

Query: 307 ISIDKSCMFAYETLGTIEVQRGRLEEAVKCFNKALPLARDEAELSHIYSLRDAAIAQMKV 366
             +D     A   L  +++Q+  ++EA+  F ++  LAR   E     +  +AA  Q ++
Sbjct: 382 SKLDPRSEQAKIGLAQMKLQQEDIDEAITLFEESADLARTMEEKLQAITFAEAAKVQQRI 441

Query: 367 CERYNIKKKV 376
                + KK+
Sbjct: 442 RSDPVLAKKI 451


>gi|110590444|pdb|2GW1|A Chain A, Crystal Structure Of The Yeast Tom70
 gi|110590445|pdb|2GW1|B Chain B, Crystal Structure Of The Yeast Tom70
          Length = 514

 Score = 72.4 bits (176), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 66/250 (26%), Positives = 120/250 (48%), Gaps = 15/250 (6%)

Query: 135 KVNAHIKRAVVHLHAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNL 194
           +VN++I  A++ +   +D T+ +   D+A K+D N +  YY RGQ+  +   Y++A ++ 
Sbjct: 269 RVNSYIYMALI-MADRNDSTEYYNYFDKALKLDSNNSSVYYHRGQMNFILQNYDQAGKDF 327

Query: 195 DKTIALNPNFHVARAQRHFVVHKMIVPGDRERVEQSLKEFRNFVDTHSNVVEACTLFAQV 254
           DK   L+P       Q   + ++     D E +    K  R F +      E    FA++
Sbjct: 328 DKAKELDPENIFPYIQLACLAYRENKFDDCETLFSEAK--RKFPEAP----EVPNFFAEI 381

Query: 255 LVDQEDFDGAEEYFNRSIRVDPENASLYVHRAMLMLQAR--------GNVDEAIKLIEKA 306
           L D+ DFD A + ++ +I ++ +   +YV  A L+ +A          N  EA  L+EKA
Sbjct: 382 LTDKNDFDKALKQYDLAIELENKLDGIYVGIAPLVGKATLLTRNPTVENFIEATNLLEKA 441

Query: 307 ISIDKSCMFAYETLGTIEVQRGRLEEAVKCFNKALPLARDEAELSHIYSLRDAAIAQMKV 366
             +D     A   L  +++Q+  ++EA+  F ++  LAR   E     +  +AA  Q ++
Sbjct: 442 SKLDPRSEQAKIGLAQMKLQQEDIDEAITLFEESADLARTMEEKLQAITFAEAAKVQQRI 501

Query: 367 CERYNIKKKV 376
                + KK+
Sbjct: 502 RSDPVLAKKI 511


>gi|306838683|ref|ZP_07471519.1| TPR domain-containing protein [Brucella sp. NF 2653]
 gi|306406326|gb|EFM62569.1| TPR domain-containing protein [Brucella sp. NF 2653]
          Length = 283

 Score = 72.4 bits (176), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 55/183 (30%), Positives = 87/183 (47%), Gaps = 7/183 (3%)

Query: 167 DPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQRHFVVHKMIVPGDRER 226
           +P   + Y  RG  Y   G+Y+EA+R+ D+ IALNPNF+ A A R  V   M   GD  +
Sbjct: 64  NPRDPEGYNVRGSAYGKAGRYKEAMRDFDQAIALNPNFYQAYANRALVDRYM---GDNNK 120

Query: 227 VEQSLKEFRNFVDTHSNVVEACTLFAQVLVDQEDFDGAEEYFNRSIRVDPENASLYVHRA 286
              +++++   +  +     A      V       D A   FN++I +   +   Y +R 
Sbjct: 121 ---AVQDYSRAIQLNPQYDAAYIGRGNVYRQAGRLDQALNNFNQAIALRTTDGRAYHNRG 177

Query: 287 MLMLQARGNVDEAIKLIEKAISIDKSCMFAYETLGTIEVQRGRLEEAVKCFNKALPLARD 346
            L+ QA+G   +AI+   KAIS++ +    Y   G   V  G  + A   FN A+ L ++
Sbjct: 178 -LIYQAKGLHKQAIEDFSKAISLNSTAPEPYNGRGISYVALGDFDNAFDDFNTAITLDQN 236

Query: 347 EAE 349
            AE
Sbjct: 237 VAE 239



 Score = 52.0 bits (123), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 49/208 (23%), Positives = 93/208 (44%), Gaps = 12/208 (5%)

Query: 103 LRATVYIFTSQSTKAIEDLTQLVEDTSVDPKIKVNAHIKRAVVHLHAASDFTKAFADLDE 162
           +R + Y    +  +A+ D  Q +   +++P     A+  RA+V  +   D  KA  D   
Sbjct: 73  VRGSAYGKAGRYKEAMRDFDQAI---ALNPNF-YQAYANRALVDRYMG-DNNKAVQDYSR 127

Query: 163 AEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQRHFVVHKMIVPG 222
           A +++P    +Y  RG +Y   G+ ++AL N ++ IAL      A   R  +     +  
Sbjct: 128 AIQLNPQYDAAYIGRGNVYRQAGRLDQALNNFNQAIALRTTDGRAYHNRGLIYQAKGLH- 186

Query: 223 DRERVEQSLKEFRNFVDTHSNVVEACTLFAQVLVDQEDFDGAEEYFNRSIRVDPENASLY 282
                +Q++++F   +  +S   E         V   DFD A + FN +I +D   A  +
Sbjct: 187 -----KQAIEDFSKAISLNSTAPEPYNGRGISYVALGDFDNAFDDFNTAITLDQNVAESW 241

Query: 283 VHRAMLMLQARGNVDEAIKLIEKAISID 310
            ++A L+ +  G+  +A     +A+ +D
Sbjct: 242 ANQA-LVYEHNGDKAKAANSYARAVQLD 268



 Score = 48.1 bits (113), Expect = 0.011,   Method: Compositional matrix adjust.
 Identities = 22/48 (45%), Positives = 30/48 (62%)

Query: 479 DPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQRHFV 526
           +P   + Y  RG  Y   G+Y+EA+R+ D+ IALNPNF+ A A R  V
Sbjct: 64  NPRDPEGYNVRGSAYGKAGRYKEAMRDFDQAIALNPNFYQAYANRALV 111



 Score = 40.4 bits (93), Expect = 2.5,   Method: Compositional matrix adjust.
 Identities = 24/85 (28%), Positives = 47/85 (55%), Gaps = 1/85 (1%)

Query: 268 FNRSIRVDPENASLYVHRAMLMLQARGNVDEAIKLIEKAISIDKSCMFAYETLGTIEVQR 327
           F+++I ++P     Y +RA L+ +  G+ ++A++   +AI ++     AY   G +  Q 
Sbjct: 91  FDQAIALNPNFYQAYANRA-LVDRYMGDNNKAVQDYSRAIQLNPQYDAAYIGRGNVYRQA 149

Query: 328 GRLEEAVKCFNKALPLARDEAELSH 352
           GRL++A+  FN+A+ L   +    H
Sbjct: 150 GRLDQALNNFNQAIALRTTDGRAYH 174



 Score = 40.0 bits (92), Expect = 3.5,   Method: Compositional matrix adjust.
 Identities = 27/105 (25%), Positives = 50/105 (47%), Gaps = 5/105 (4%)

Query: 104 RATVYIFTSQSTKAIEDLTQLVEDTSVDPKIKVNAHIKRAVVHLHAASDFTKAFADLDEA 163
           R  +Y       +AIED ++ +   S  P+     +  R + ++ A  DF  AF D + A
Sbjct: 176 RGLIYQAKGLHKQAIEDFSKAISLNSTAPE----PYNGRGISYV-ALGDFDNAFDDFNTA 230

Query: 164 EKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVAR 208
             +D NVA+S+  +  +Y   G   +A  +  + + L+P +  A+
Sbjct: 231 ITLDQNVAESWANQALVYEHNGDKAKAANSYARAVQLDPKYKPAK 275


>gi|429124499|ref|ZP_19185031.1| hypothetical protein A966_09454 [Brachyspira hampsonii 30446]
 gi|426279738|gb|EKV56759.1| hypothetical protein A966_09454 [Brachyspira hampsonii 30446]
          Length = 422

 Score = 72.4 bits (176), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 90/372 (24%), Positives = 145/372 (38%), Gaps = 57/372 (15%)

Query: 166 VDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQRHFVVHKMIVPGDRE 225
           +D N  + YY R    C  G YE A+++ DK I L P    A   R F        G+  
Sbjct: 63  IDENYGELYYNRANCECNLGFYEAAIKDYDKVIELVPTHSRAYNDRGFA------KGNLG 116

Query: 226 RVEQSLKEFRNFVDTHSNVVEACTLFAQVLVDQEDFDGAEEYFNRSIRVDPENASLYVHR 285
             E +LK+                                   +++I +D  N   Y+ R
Sbjct: 117 LYEDALKDI----------------------------------DKAIVLDSNNVDSYIDR 142

Query: 286 AMLMLQARGNVDEAIKLIEKAISIDKSCMFAYETLGTIEVQRGRLEEAVKCFNKALPLAR 345
           A + L ++  + EAI+  +KA+ +D + ++AY  +G  +   G  EEA+  + K + L+ 
Sbjct: 143 AFIKLMSKKYI-EAIEDYKKALELDDTEVYAYNGIGDAKRGMGLYEEAISYYKKVIELSN 201

Query: 346 DEAELSHIYS-------LRDAAIAQMKVCERYNIKKKVSPRSQNITKNEKLAIKQLRENN 398
                ++I +        +DA I   K  E Y+          +   N   A   L    
Sbjct: 202 SSYAYNNIGACKIGLGLYKDAIIDINKALEIYD-------EYTDAYNNRGTAKYNLELYE 254

Query: 399 DIIIRPADKGGKTVVMDKADYTQKMTSILNSNDYEIIPGDPTKTIEESEKYGN-LENESG 457
           D I +  DK  +        Y  +  +      YE    D +K+I    KY +   N + 
Sbjct: 255 DAI-KDFDKAIELYPQYFYAYNNRGNAKSALGLYEDALEDFSKSINIEPKYIDAYYNRAI 313

Query: 458 QKHAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFH 517
            K+      +A  D D   ++D N  ++YY RG  Y     YE+AL++ D+ + LNP   
Sbjct: 314 VKNNMGLHNEAVKDYDIVIELDNNNINAYYNRGLSYYNLADYEKALKDYDRVMELNPKLA 373

Query: 518 VARAQRHFVWTS 529
            A   R F   S
Sbjct: 374 DAYNNRGFTKYS 385



 Score = 51.2 bits (121), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 26/83 (31%), Positives = 46/83 (55%), Gaps = 1/83 (1%)

Query: 136 VNAHIKRAVVHLHAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLD 195
           +NA+  R + + + A D+ KA  D D   +++P +AD+Y  RG      G YEEA+ + D
Sbjct: 339 INAYYNRGLSYYNLA-DYEKALKDYDRVMELNPKLADAYNNRGFTKYSMGLYEEAINDYD 397

Query: 196 KTIALNPNFHVARAQRHFVVHKM 218
           K I ++ N+  A+  +   + K+
Sbjct: 398 KAIEIDANYEKAKQNKQEALKKI 420



 Score = 50.1 bits (118), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 33/106 (31%), Positives = 55/106 (51%), Gaps = 13/106 (12%)

Query: 117 AIEDLTQLVEDTSVDPKIKVNAHIKRAVVH----LHAASDFTKAFADLDEAEKVDPNVAD 172
           A+ED ++ +   +++PK  ++A+  RA+V     LH      +A  D D   ++D N  +
Sbjct: 290 ALEDFSKSI---NIEPKY-IDAYYNRAIVKNNMGLH-----NEAVKDYDIVIELDNNNIN 340

Query: 173 SYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQRHFVVHKM 218
           +YY RG  Y     YE+AL++ D+ + LNP    A   R F  + M
Sbjct: 341 AYYNRGLSYYNLADYEKALKDYDRVMELNPKLADAYNNRGFTKYSM 386



 Score = 46.2 bits (108), Expect = 0.046,   Method: Compositional matrix adjust.
 Identities = 76/309 (24%), Positives = 123/309 (39%), Gaps = 41/309 (13%)

Query: 255 LVDQEDFDGAEEYFNRSIRVDPENASLYVHRAMLMLQARGNVDEAIKLIEKAISIDKSCM 314
           L  +  F+ A E F +++  D  N+ +Y +   L  QA G  +EAI    K I ID++  
Sbjct: 10  LFRETQFEKASELFIKALEEDCNNSEIYNYLG-LSKQALGFFEEAINYYSKGIDIDENYG 68

Query: 315 FAYETLGTIEVQRGRLEEAVKCFNKALPLARDEAELSHIYSLRDAAIAQMKVCERY--NI 372
             Y      E   G  E A+K ++K + L       S  Y+ R  A   + + E    +I
Sbjct: 69  ELYYNRANCECNLGFYEAAIKDYDKVIELVPTH---SRAYNDRGFAKGNLGLYEDALKDI 125

Query: 373 KKKVSPRSQNI------------TKNEKLAI---KQLRENNDIIIRPAD-----KGGKTV 412
            K +   S N+            +K    AI   K+  E +D  +   +     K G  +
Sbjct: 126 DKAIVLDSNNVDSYIDRAFIKLMSKKYIEAIEDYKKALELDDTEVYAYNGIGDAKRGMGL 185

Query: 413 VMDKADYTQKMTSILNSN-DYEIIPG-------------DPTKTIEESEKYGNLENESGQ 458
             +   Y +K+  + NS+  Y  I               D  K +E  ++Y +  N  G 
Sbjct: 186 YEEAISYYKKVIELSNSSYAYNNIGACKIGLGLYKDAIIDINKALEIYDEYTDAYNNRGT 245

Query: 459 -KHAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFH 517
            K+    +  A  D D+A ++ P    +Y  RG      G YE+AL +  K+I + P + 
Sbjct: 246 AKYNLELYEDAIKDFDKAIELYPQYFYAYNNRGNAKSALGLYEDALEDFSKSINIEPKYI 305

Query: 518 VARAQRHFV 526
            A   R  V
Sbjct: 306 DAYYNRAIV 314



 Score = 43.1 bits (100), Expect = 0.42,   Method: Compositional matrix adjust.
 Identities = 41/191 (21%), Positives = 85/191 (44%), Gaps = 7/191 (3%)

Query: 153 FTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQRH 212
           +  A  D+++A ++     D+Y  RG        YE+A+++ DK I L P +  A   R 
Sbjct: 219 YKDAIIDINKALEIYDEYTDAYNNRGTAKYNLELYEDAIKDFDKAIELYPQYFYAYNNRG 278

Query: 213 FVVHKMIVPGDRERVEQSLKEFRNFVDTHSNVVEACTLFAQVLVDQEDFDGAEEYFNRSI 272
                + +       E +L++F   ++     ++A    A V  +    + A + ++  I
Sbjct: 279 NAKSALGL------YEDALEDFSKSINIEPKYIDAYYNRAIVKNNMGLHNEAVKDYDIVI 332

Query: 273 RVDPENASLYVHRAMLMLQARGNVDEAIKLIEKAISIDKSCMFAYETLGTIEVQRGRLEE 332
            +D  N + Y +R  L      + ++A+K  ++ + ++     AY   G  +   G  EE
Sbjct: 333 ELDNNNINAYYNRG-LSYYNLADYEKALKDYDRVMELNPKLADAYNNRGFTKYSMGLYEE 391

Query: 333 AVKCFNKALPL 343
           A+  ++KA+ +
Sbjct: 392 AINDYDKAIEI 402


>gi|28564115|gb|AAO32436.1| TOM70 [Saccharomyces bayanus]
          Length = 617

 Score = 72.4 bits (176), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 69/258 (26%), Positives = 125/258 (48%), Gaps = 20/258 (7%)

Query: 117 AIEDLTQLVEDTSVDPKIKVNAHIKRAVVHLHAASDFTKAFADLDEAEKVDPNVADSYYQ 176
           A ED+T+     ++D   +VN++I  A++ +   +D T+ +   D+A K+D N +  YY 
Sbjct: 349 AHEDITK-----AIDLFPRVNSYIYMALI-MADRNDSTEYYNYFDKALKLDLNNSSVYYH 402

Query: 177 RGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQRHFVVHKMIVPGDRERVEQSLKEFRN 236
           RGQ+  +   Y++A ++ DK   L+P       Q   + ++     D E +    K  R 
Sbjct: 403 RGQMNFILQNYDQAGKDFDKAKELDPENIFPYIQLACLAYRENKFDDCETLFSEAK--RK 460

Query: 237 FVDTHSNVVEACTLFAQVLVDQEDFDGAEEYFNRSIRVDPENASLYVHRAMLMLQAR--- 293
           F +      E    FA++L D+ DFD A + ++ +I ++ +   +YV  A L+ +A    
Sbjct: 461 FPEAP----EVPNFFAEILTDKNDFDKALKQYDLAIELENKLEGIYVGIAPLVGKATLLT 516

Query: 294 -----GNVDEAIKLIEKAISIDKSCMFAYETLGTIEVQRGRLEEAVKCFNKALPLARDEA 348
                 N  EA  L+EKA  +D     A   L  +++Q+  ++EA+  F ++  LAR   
Sbjct: 517 RNPTVENFIEATNLLEKASKLDPRSEQAKIGLAQMKLQQEDIDEAIALFEESADLARTME 576

Query: 349 ELSHIYSLRDAAIAQMKV 366
           E     +  +AA  Q ++
Sbjct: 577 EKLQAITFAEAAKVQQRI 594


>gi|113476439|ref|YP_722500.1| hypothetical protein Tery_2853 [Trichodesmium erythraeum IMS101]
 gi|110167487|gb|ABG52027.1| TPR repeat [Trichodesmium erythraeum IMS101]
          Length = 3172

 Score = 72.0 bits (175), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 50/192 (26%), Positives = 98/192 (51%), Gaps = 8/192 (4%)

Query: 162  EAEKVDPNVADSYYQRGQIYCLF-GQYEEALRNLDKTIALNPNFHVARAQRHFVVHKMIV 220
            +A K++PN + + Y+ G I  L  G+ EEA+    K I + P       + ++ +  ++V
Sbjct: 1729 QALKLNPNDSGANYEMGNILALLPGKLEEAISYYRKAIEIEPYL----TEAYYSLANILV 1784

Query: 221  PGDRERVEQSLKEFRNFVDTHSNVVEACTLFAQVLVDQEDFDGAEEYFNRSIRVDPENAS 280
              ++ ++E+ +  +   ++   N+ E       +L+ QE F  A   +  +I+++P ++ 
Sbjct: 1785 --NQNQLEKVVILYEKLIEIQPNLWEPHHNLGDILIKQEKFSEAISAYGHAIKLNPNSSV 1842

Query: 281  LYVHRAMLMLQARGNVDEAIKLIEKAISIDKSCMFAYETLGTIEVQRGRLEEAVKCFNKA 340
             YV  A ++ +  G + +AI    KAI+ID   + AY+ LG     +G  EEA+K + KA
Sbjct: 1843 SYVKLADILAKV-GELSQAINAYYKAIAIDPDFVDAYQYLGDALRNKGEKEEAIKVYRKA 1901

Query: 341  LPLARDEAELSH 352
            + +     E+ H
Sbjct: 1902 IEIRPQLWEVHH 1913



 Score = 68.2 bits (165), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 85/397 (21%), Positives = 168/397 (42%), Gaps = 42/397 (10%)

Query: 153  FTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQRH 212
            F++A +    A K++PN + SY +   I    G+  +A+    K IA++P+F  A     
Sbjct: 1823 FSEAISAYGHAIKLNPNSSVSYVKLADILAKVGELSQAINAYYKAIAIDPDFVDA---YQ 1879

Query: 213  FVVHKMIVPGDRERVEQSLKEFRNFVDTHSNVVEACTLFAQVLVDQEDFDGAEEYFNRSI 272
            ++   +   G++   E+++K +R  ++    + E       +  + E+ + A   + +SI
Sbjct: 1880 YLGDALRNKGEK---EEAIKVYRKAIEIRPQLWEVHHKLGSLFQETEELETAANAYRKSI 1936

Query: 273  RVDPENASLYVHRAMLMLQARGNVDEAIKLIEKAISIDKSCMFAYETLGTIEVQRGRLEE 332
             ++P+    Y +   ++++      EA  +  +AI ++    ++Y  LG + V+  +  E
Sbjct: 1937 ELNPDFCWSYNNLGDVLVRLE-KWSEATGVYSRAIELNPDFCWSYNNLGDVLVKLEKWPE 1995

Query: 333  AVKCFNKALPLARDEAELSHIYSLRDAAIA---QMKVCERYNIKKKVSPRSQNITK---- 385
            A   +++A+ L  D     + Y L D  +           Y    K+ P  ++I +    
Sbjct: 1996 AKSVYHQAIELNPDFP--WNYYKLADVLVKLEDWEGAIAAYQKAIKLDPDRKDIKQYLAD 2053

Query: 386  -----NEKLA-IKQLRENNDIIIRPADKGGKTVVMDKADYTQ---KMTSILNSN------ 430
                  EK+A  KQ +E N  + +    G       K+D  +     T  +++N      
Sbjct: 2054 AENQLQEKIANAKQQQEANKKLTKAGQFGKILATQSKSDLEKIAVNNTIKVDANFAEYYH 2113

Query: 431  ---DYEIIPGDPTKTIEESEKYGNLENESGQKH--------AASDFTKAFADLDEAEKVD 479
               D  +  G+  K I+   K   +E ES + H               A A  +E+ ++ 
Sbjct: 2114 LQGDTLVEKGEKEKAIKVYRKAVEMEPESWEVHHKLGNLLQEIGKLEDAIAAYNESIELK 2173

Query: 480  PNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNF 516
            P+++ SY   G +    G+  EA++   K I L PNF
Sbjct: 2174 PDLSWSYNNLGDVLVRLGKLNEAIKYYQKAIYLEPNF 2210



 Score = 50.8 bits (120), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 54/214 (25%), Positives = 94/214 (43%), Gaps = 12/214 (5%)

Query: 162  EAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQRH-FVVHKMIV 220
            +A K  P+ + +    G ++   GQ E A     K I   PNF  A A      V K   
Sbjct: 867  QALKSQPDYSPACKTLGNVFYAQGQIETAWYWYTKAIEYQPNFAEAYANLGTLSVKKEQW 926

Query: 221  PGDRERVEQSLKEFRNFVDTHSNVVEACTLFAQVLVDQEDFDGAEEYFNR-SIRVDPENA 279
                   +++LK    F   + N+            + E F    EY    + ++ PEN 
Sbjct: 927  QEAISYYQKALKIQPKFAGVYRNLARIYQKIGSY-TEAEKFSIKAEYLEPVNQKITPENQ 985

Query: 280  ----SLYVHRAMLMLQARGNVDEAIKLIEKAISIDKSCMFAYETLGTIEVQRGRLEEAVK 335
                +LY  +    LQ++G V+ A +  +K +S++K+    Y  +G++  Q+ +  EA+K
Sbjct: 986  AIKLTLYYKKLGKRLQSQGEVEAAWQSYKKFLSLEKNDPEIYLNIGSLYAQQEQWIEAIK 1045

Query: 336  CFNKALPLARDEAELSHIYSLRDAAIAQMKVCER 369
            C+ K+L +  + A+     + R  AIA  KV ++
Sbjct: 1046 CYQKSLVIQPNYAD-----AYRQLAIAWRKVGKK 1074



 Score = 47.4 bits (111), Expect = 0.020,   Method: Compositional matrix adjust.
 Identities = 44/202 (21%), Positives = 92/202 (45%), Gaps = 20/202 (9%)

Query: 149 AASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNP------ 202
           AA  + +A       ++V+ N+   +YQ+G    L G Y+    +  K IAL P      
Sbjct: 32  AAFYYQQALNQNPNLQQVNYNLGIIHYQQGD---LLGAYQ----SYKKAIALKPDDINAY 84

Query: 203 -NFHVARAQRHFVVHKMIVPGDRERVEQSLKEFRNFVDTHSNVVEACTLFAQVLVDQEDF 261
            N  +    +  ++    +   ++ +  S  E  N   +H  +V   + +  +L+ Q   
Sbjct: 85  YNLGIVLQNQGLLISA--IDSYQQAINLSKSEKSN---SHETIVNCYSNWGCILLHQGQS 139

Query: 262 DGAEEYFNRSIRVDPENASLYVHRAMLMLQARGNVDEAIKLIEKAISIDKSCMFAYETLG 321
           D A   F  ++ + P++ ++Y +    +LQ +  +D+AI  ++K++ ++     +   LG
Sbjct: 140 DAAIAVFKEALLLKPDDFTIYNNIGQALLQ-KSQLDQAITYLKKSLKLEPQFTISLYHLG 198

Query: 322 TIEVQRGRLEEAVKCFNKALPL 343
            +   +G  E+AVK F + + L
Sbjct: 199 QVYQSQGLHEKAVKYFQQIIEL 220



 Score = 43.5 bits (101), Expect = 0.26,   Method: Compositional matrix adjust.
 Identities = 57/241 (23%), Positives = 91/241 (37%), Gaps = 65/241 (26%)

Query: 292  ARGNVDEAIKLIEKAISIDKSCMFAYETLGTIEVQRGRLEEAVKCFNKALPLARDEA--- 348
            A+G ++ A     KAI    +   AY  LGT+ V++ + +EA+  + KAL +    A   
Sbjct: 888  AQGQIETAWYWYTKAIEYQPNFAEAYANLGTLSVKKEQWQEAISYYQKALKIQPKFAGVY 947

Query: 349  -ELSHIYSLRDAAIAQMKVCERYNIKKK-VSPRSQNITKNEKLAIKQLRENNDIIIRPAD 406
              L+ IY      I      E+++IK + + P +Q IT                   P +
Sbjct: 948  RNLARIYQ----KIGSYTEAEKFSIKAEYLEPVNQKIT-------------------PEN 984

Query: 407  KGGKTVVMDKADYTQKMTSILNSNDYEIIPGDPTKTIEESEKYGNLENESGQKHAASDFT 466
            +  K  +     Y +K+   L S                           G+  AA    
Sbjct: 985  QAIKLTL-----YYKKLGKRLQS--------------------------QGEVEAAWQSY 1013

Query: 467  KAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQRHFV 526
            K F  L   EK DP +   Y   G +Y    Q+ EA++   K++ + PN+  A  Q    
Sbjct: 1014 KKFLSL---EKNDPEI---YLNIGSLYAQQEQWIEAIKCYQKSLVIQPNYADAYRQLAIA 1067

Query: 527  W 527
            W
Sbjct: 1068 W 1068



 Score = 42.7 bits (99), Expect = 0.45,   Method: Compositional matrix adjust.
 Identities = 34/138 (24%), Positives = 62/138 (44%), Gaps = 5/138 (3%)

Query: 246  EACTLFAQVLVDQEDFDGAEEYFNRSIRVDPENASLYVHRAMLMLQARGNVDEAIKLIEK 305
            EA  +  +    +   D A   + ++++++P ++        ++    G ++EAI    K
Sbjct: 1705 EAYQIMGKAFQQKNQLDNAINCYAQALKLNPNDSGANYEMGNILALLPGKLEEAISYYRK 1764

Query: 306  AISIDKSCMFAYETLGTIEVQRGRLEEAVKCFNKALPLARDEAELSHIYSLRDAAIAQMK 365
            AI I+     AY +L  I V + +LE+ V  + K + +  +  E  H  +L D  I Q K
Sbjct: 1765 AIEIEPYLTEAYYSLANILVNQNQLEKVVILYEKLIEIQPNLWEPHH--NLGDILIKQEK 1822

Query: 366  VCE---RYNIKKKVSPRS 380
              E    Y    K++P S
Sbjct: 1823 FSEAISAYGHAIKLNPNS 1840



 Score = 40.0 bits (92), Expect = 2.8,   Method: Compositional matrix adjust.
 Identities = 93/429 (21%), Positives = 166/429 (38%), Gaps = 72/429 (16%)

Query: 153  FTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNP-NFHVA---R 208
            + +A +   +A K+ P  A  Y    +IY   G Y EA +   K   L P N  +    +
Sbjct: 926  WQEAISYYQKALKIQPKFAGVYRNLARIYQKIGSYTEAEKFSIKAEYLEPVNQKITPENQ 985

Query: 209  AQRHFVVHKMIVPGDRER----VEQSLKEFRNFVDTHSNVVEACTLFAQVLVDQEDFDGA 264
            A +  + +K +  G R +    VE + + ++ F+    N  E       +   QE +  A
Sbjct: 986  AIKLTLYYKKL--GKRLQSQGEVEAAWQSYKKFLSLEKNDPEIYLNIGSLYAQQEQWIEA 1043

Query: 265  EEYFNRSIRVDPENASLYVHRAMLMLQARGNVDEAIKLIEKAISIDKSCMFAYE--TLGT 322
             + + +S+ + P  A  Y   A+   +  G   +    + +A S++     A E   LG 
Sbjct: 1044 IKCYQKSLVIQPNYADAYRQLAIAWRKV-GKKTKGDNCLYQAYSLEPGKATAEEHLILGN 1102

Query: 323  IEVQRGRLEEAVKCFNKALPLARD----EAELSHIYSLRDAAIAQMKVCERY--NIKKKV 376
              +Q+  + +A+ C+ +A+ L  +       L     L+       KV   Y  N++  +
Sbjct: 1103 SLLQQKVISQAISCYCRAIELNPNLLGAYESLGEALKLQGTKKPTTKVFPNYWQNLENSL 1162

Query: 377  SPRSQNITKNEKLAIKQLRENNDIII--------RPADKGGKTVV---------MDKADY 419
            +       +N +  I+Q+R ++ I I        R   KG   V+          D  +Y
Sbjct: 1163 NLLIGENHQNSQGIIQQVRADDTIHIIQKPENFQRVVSKGVSRVISTFDLKSDLSDSVNY 1222

Query: 420  TQKMTSIL-NSNDYEIIP-GDPTKTIEESEK----------YGNLENE-----SGQKHAA 462
             +   S+L NS D  +    + TKT+  ++           YGN+E E     S +K   
Sbjct: 1223 LESSLSVLENSQDKRVTNYKEITKTLAPNKPLIIEADVTNVYGNIEGEKTVMNSPKKANN 1282

Query: 463  SDFTKAFADLDEAEKVDP-------------------NVADSYYQRGQIYCLFGQYEEAL 503
            +    +   L E  KV+                    N+ + Y Q  Q Y   G YE+A+
Sbjct: 1283 NQIIHSTLKLKEISKVNEVKQINSTFLLKDMTSNGVRNIPNVYIQEAQKYYEEGFYEKAI 1342

Query: 504  RNLDKTIAL 512
                + I+L
Sbjct: 1343 SQCQQAISL 1351


>gi|411118571|ref|ZP_11390952.1| methyltransferase, FkbM family [Oscillatoriales cyanobacterium
           JSC-12]
 gi|410712295|gb|EKQ69801.1| methyltransferase, FkbM family [Oscillatoriales cyanobacterium
           JSC-12]
          Length = 928

 Score = 72.0 bits (175), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 51/204 (25%), Positives = 99/204 (48%), Gaps = 8/204 (3%)

Query: 138 AHIKRAVVHLHAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKT 197
           AH   A+  L+  +   +A     +A  + P  A++++  G      G+ +EA+ +  K 
Sbjct: 107 AHYNLAIA-LYENNQVDEAITYYQQAVALMPEYANAHHNLGMALYRQGKADEAITHYQKA 165

Query: 198 IALNPNFHVARAQRHFVVHKMIVPGDRERVEQSLKEFRNFVDTHSNVVEACTLFAQVLVD 257
           IAL PN   AR      +++      + +++++++++R  + T  N V A       L  
Sbjct: 166 IALEPNHASARNSLGVALYQ------QGKIDEAIEQYRQAIATLPNYVSAHDNLGIALKQ 219

Query: 258 QEDFDGAEEYFNRSIRVDPENASLYVHRAMLMLQARGNVDEAIKLIEKAISIDKSCMFAY 317
           Q+  + A  +F  +I + P+ A+ Y++    M +  GN D+AI    ++I +  +   A+
Sbjct: 220 QQKLEEAATHFQTAISLRPDYANAYINLGNTM-RELGNYDQAIAYCRESIRLQPTNADAH 278

Query: 318 ETLGTIEVQRGRLEEAVKCFNKAL 341
            T G + V  GR EEA+ C+  A+
Sbjct: 279 NTYGCVLVDLGRFEEAIACYEAAI 302



 Score = 57.0 bits (136), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 64/301 (21%), Positives = 125/301 (41%), Gaps = 40/301 (13%)

Query: 219 IVPGDRERVEQSLKEFRNFVDTHSNVVEACTLFAQVLVDQEDFDGAEEYFNRSIRVDPEN 278
           +V   + R  +++  ++  +    N  EA      V +    FD A  +  +S+ + P+N
Sbjct: 45  LVTDQQGRPMEAIAHYQKVLQLQPNSAEAHGNLGSVWLKLRRFDEAIAHHRKSVELMPQN 104

Query: 279 ASLYVHRAMLMLQARGNVDEAIKLIEKAISIDKSCMFAYETLGTIEVQRGRLEEAVKCFN 338
           A  + + A+ + +    VDEAI   ++A+++      A+  LG    ++G+ +EA+  + 
Sbjct: 105 AKAHYNLAIALYE-NNQVDEAITYYQQAVALMPEYANAHHNLGMALYRQGKADEAITHYQ 163

Query: 339 KALPLARDEAELSHIYSLRDAAIAQMKV---CERYNIKKKVSPRSQNITKNEKLAIKQLR 395
           KA+ L  + A   +  SL  A   Q K+    E+Y       P   +   N  +A+KQ +
Sbjct: 164 KAIALEPNHASARN--SLGVALYQQGKIDEAIEQYRQAIATLPNYVSAHDNLGIALKQQQ 221

Query: 396 ENNDIIIRPADKGGKTVVMDKADYTQKMTSILNSNDYEIIPGDPTKTIEESEKYGNLENE 455
           +     +  A    +T +  + DY     ++                       GN   E
Sbjct: 222 K-----LEEAATHFQTAISLRPDYANAYINL-----------------------GNTMRE 253

Query: 456 SGQKHAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPN 515
            G      ++ +A A   E+ ++ P  AD++   G +    G++EEA+   +  I   P+
Sbjct: 254 LG------NYDQAIAYCRESIRLQPTNADAHNTYGCVLVDLGRFEEAIACYEAAIQHRPD 307

Query: 516 F 516
           F
Sbjct: 308 F 308



 Score = 54.3 bits (129), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 46/194 (23%), Positives = 94/194 (48%), Gaps = 7/194 (3%)

Query: 155 KAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQRHFV 214
           +A A   +  ++ PN A+++   G ++    +++EA+ +  K++ L P      A+ H+ 
Sbjct: 55  EAIAHYQKVLQLQPNSAEAHGNLGSVWLKLRRFDEAIAHHRKSVELMPQ----NAKAHY- 109

Query: 215 VHKMIVPGDRERVEQSLKEFRNFVDTHSNVVEACTLFAQVLVDQEDFDGAEEYFNRSIRV 274
            +  I   +  +V++++  ++  V        A       L  Q   D A  ++ ++I +
Sbjct: 110 -NLAIALYENNQVDEAITYYQQAVALMPEYANAHHNLGMALYRQGKADEAITHYQKAIAL 168

Query: 275 DPENASLYVHRAMLMLQARGNVDEAIKLIEKAISIDKSCMFAYETLGTIEVQRGRLEEAV 334
           +P +AS      + + Q +G +DEAI+   +AI+   + + A++ LG    Q+ +LEEA 
Sbjct: 169 EPNHASARNSLGVALYQ-QGKIDEAIEQYRQAIATLPNYVSAHDNLGIALKQQQKLEEAA 227

Query: 335 KCFNKALPLARDEA 348
             F  A+ L  D A
Sbjct: 228 THFQTAISLRPDYA 241


>gi|182438044|ref|YP_001825763.1| hypothetical protein SGR_4251 [Streptomyces griseus subsp. griseus
           NBRC 13350]
 gi|326778687|ref|ZP_08237952.1| Tetratricopeptide TPR_2 repeat-containing protein [Streptomyces
           griseus XylebKG-1]
 gi|117676062|dbj|BAF36653.1| hypothetical protein [Streptomyces griseus]
 gi|178466560|dbj|BAG21080.1| hypothetical protein [Streptomyces griseus subsp. griseus NBRC
           13350]
 gi|326659020|gb|EGE43866.1| Tetratricopeptide TPR_2 repeat-containing protein [Streptomyces
           griseus XylebKG-1]
          Length = 801

 Score = 72.0 bits (175), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 83/321 (25%), Positives = 137/321 (42%), Gaps = 33/321 (10%)

Query: 42  PDGLSNGVELTN-GDTNESHELDLLSKAKRAFEHEDYLTAI-RHCTEEIESTSSNH---- 95
           P+ L  G+EL     +   H    L++A      ED   A+ R    ++ +  ++H    
Sbjct: 477 PEALRAGIELCGQAPSRARHWARTLAEAG-----EDADNAVLRDWGRDLLAAITDHGPRP 531

Query: 96  TKALARLL---------RATVYIFTSQSTKAIEDLTQLVED----TSVDPKIKVNAHIKR 142
           T AL  LL         RA   +  +       +L   + D     +VDP+ +  AH  R
Sbjct: 532 TAALGLLLTRAELTDTDRAAALVVRAWDRFRAGELDAALSDHGRAIAVDPRSE-RAHQGR 590

Query: 143 AVVHLHAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNP 202
           AV+ L +     +A ADLD AE++ P  A +  +RG+ Y   G+  EAL  LD+  AL+P
Sbjct: 591 AVI-LRSLGRHEEALADLDRAEEIAPAWAWAVRERGETYRRMGRLAEALTVLDRAHALDP 649

Query: 203 NFHVARAQRHFVVHKMIVPGDRERVEQSLKEFRNFVDTHSNVVEACTLFAQVLVDQEDFD 262
           +  V    R  V H +       R E++L +F   +        A    ++V     D  
Sbjct: 650 SDAVPLGSRGLVRHAL------GRHEEALDDFDRAIALWPEYAWALVRRSRVRTVLGDPV 703

Query: 263 GAEEYFNRSIRVDPENASLYVHRAMLMLQARGNVDEAIKLIEKAISIDKSCMFAYETLGT 322
           GA    +R+  + P  A     R  +  +A     EA+   ++A+++D    +AY +   
Sbjct: 704 GALADLDRAEELSPGQAGTEGERGEVY-RATDRPGEAVACYDRALALDPDYAWAYGSRAL 762

Query: 323 IEVQRGRLEEAVKCFNKALPL 343
                GR+ EA+   ++AL L
Sbjct: 763 ALEALGRVPEALADLDRALEL 783



 Score = 49.3 bits (116), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 59/267 (22%), Positives = 106/267 (39%), Gaps = 50/267 (18%)

Query: 260 DFDGAEEYFNRSIRVDPENASLYVHRAMLMLQARGNVDEAIKLIEKAISIDKSCMFAYET 319
           + D A     R+I VDP +   +  RA+ +L++ G  +EA+  +++A  I  +  +A   
Sbjct: 565 ELDAALSDHGRAIAVDPRSERAHQGRAV-ILRSLGRHEEALADLDRAEEIAPAWAWAVRE 623

Query: 320 LGTIEVQRGRLEEAVKCFNKALPLARDEAELSHIYSLRDAAIAQMKVCERYNIKKKVSPR 379
            G    + GRL EA+   ++A           H     DA     +   R+ + +     
Sbjct: 624 RGETYRRMGRLAEALTVLDRA-----------HALDPSDAVPLGSRGLVRHALGRH---- 668

Query: 380 SQNITKNEKLAIKQLRENNDIIIRPADKGGKTVVMDKADYTQKMTSILNSNDYEIIPGDP 439
                  E L      ++ D  I              A + +   +++  +    + GDP
Sbjct: 669 ------EEAL------DDFDRAI--------------ALWPEYAWALVRRSRVRTVLGDP 702

Query: 440 TKTI-------EESEKYGNLENESGQKHAASDFT-KAFADLDEAEKVDPNVADSYYQRGQ 491
              +       E S      E E G+ + A+D   +A A  D A  +DP+ A +Y  R  
Sbjct: 703 VGALADLDRAEELSPGQAGTEGERGEVYRATDRPGEAVACYDRALALDPDYAWAYGSRAL 762

Query: 492 IYCLFGQYEEALRNLDKTIALNPNFHV 518
                G+  EAL +LD+ + L+P++  
Sbjct: 763 ALEALGRVPEALADLDRALELDPDYAW 789



 Score = 45.1 bits (105), Expect = 0.10,   Method: Compositional matrix adjust.
 Identities = 24/60 (40%), Positives = 34/60 (56%)

Query: 467 KAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQRHFV 526
           +A ADLD AE++ P  A +  +RG+ Y   G+  EAL  LD+  AL+P+  V    R  V
Sbjct: 602 EALADLDRAEEIAPAWAWAVRERGETYRRMGRLAEALTVLDRAHALDPSDAVPLGSRGLV 661



 Score = 42.4 bits (98), Expect = 0.58,   Method: Compositional matrix adjust.
 Identities = 21/61 (34%), Positives = 34/61 (55%)

Query: 463 SDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQ 522
            D   A ADLD AE++ P  A +  +RG++Y    +  EA+   D+ +AL+P++  A   
Sbjct: 700 GDPVGALADLDRAEELSPGQAGTEGERGEVYRATDRPGEAVACYDRALALDPDYAWAYGS 759

Query: 523 R 523
           R
Sbjct: 760 R 760


>gi|219848309|ref|YP_002462742.1| hypothetical protein Cagg_1399 [Chloroflexus aggregans DSM 9485]
 gi|219542568|gb|ACL24306.1| TPR repeat-containing protein [Chloroflexus aggregans DSM 9485]
          Length = 450

 Score = 72.0 bits (175), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 85/368 (23%), Positives = 144/368 (39%), Gaps = 90/368 (24%)

Query: 156 AFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQRHFVV 215
           A AD + A  +DP+ A +Y+QRGQ+    G+ EE+L +L +   L PN     A+R   +
Sbjct: 14  ALADFNRAIAIDPDYAWAYFQRGQVLRELGRMEESLADLRRACELEPNDAAYHAERGETL 73

Query: 216 HKMIVPGDRERVEQSLKEFRNFVDTHSNVVEACTLFAQVLVDQEDFDGAEEYFNRSIRVD 275
             M       R E++L  F                                  +R+I + 
Sbjct: 74  RLM------RRYEEALTAF----------------------------------SRAIELR 93

Query: 276 PENASLYVHRAMLMLQARGNVDEAIKLIEKAISIDKSCMFAYETLGTIEVQRG------- 328
           PE            L +RG V  A++   +A++  ++ +     L  +  +RG       
Sbjct: 94  PEYP--------WALGSRGQVWRALRRHHEALADFEAALALNPMLAWVHAERGETLRALR 145

Query: 329 RLEEAVKCFNKALPLARDEAELSHIYSLRDAAIAQMKVCERYNIKKKVSPRSQNITKNEK 388
           RL EA++ FN+AL +  D     ++++L    IA  ++ + Y         +  +     
Sbjct: 146 RLHEAIEAFNQALNIDPD-----YVWALGHRGIAYRELRD-YPAAIADFDAAITL----- 194

Query: 389 LAIKQLRENNDIIIRPADKGGKTVVMDKADYTQKMTSILNSNDYEIIPGDPTKTIEESEK 448
                     D I     + G+T  +              ++D+E    D  + IE   +
Sbjct: 195 ---------QDTIAWLYAERGETRRL--------------ADDFEGALFDLNRAIELDPQ 231

Query: 449 YG-NLENESGQKHAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLD 507
           Y   L +      A  D   A AD + A ++DP     Y QRG +Y    + +EAL +  
Sbjct: 232 YAWALGSRGATFRALGDTEAALADFNRALELDPAYEWVYMQRGLLYRNLDRLDEALADFS 291

Query: 508 KTIALNPN 515
           + +ALNPN
Sbjct: 292 RVLALNPN 299



 Score = 60.5 bits (145), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 60/251 (23%), Positives = 111/251 (44%), Gaps = 27/251 (10%)

Query: 150 ASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARA 209
           A DF  A  DL+ A ++DP  A +   RG  +   G  E AL + ++ + L+P +     
Sbjct: 212 ADDFEGALFDLNRAIELDPQYAWALGSRGATFRALGDTEAALADFNRALELDPAYEWVYM 271

Query: 210 QRHFVVHKMIVPGDRERVEQSLKEFRNFVDTHSNVVEACTLFAQVLVDQEDFDGAEEYFN 269
           QR  +   +      +R++++L +F   +  + N V A     ++L  +  ++ A   F+
Sbjct: 272 QRGLLYRNL------DRLDEALADFSRVLALNPNNVGALVERGELLRLRRHYNEALTDFS 325

Query: 270 RSIRVDPENASLYVHRAMLMLQARGNVDEAIKLIEKAISIDKSCMFAYETLGTIEVQRG- 328
            +I + P++A          + +RG V  A+    +A++   + +     L  I  +RG 
Sbjct: 326 HAIELQPDHA--------WAIGSRGQVYRALNRYHEALADFNNALEQKPDLVWILAERGE 377

Query: 329 ------RLEEAVKCFNKALPLARDEAELSHIYSLRDAAIAQMKVCERYNIKKKVSPRSQN 382
                 +  EA++ FN+AL L  ++   S + S R A    +K+ E   I      R+  
Sbjct: 378 TYRLLHQYNEALEDFNRALELQPND---SWVLSRRGATYQALKIFEEAYIDLT---RAIE 431

Query: 383 ITKNEKLAIKQ 393
           I  N   A+ Q
Sbjct: 432 IDPNNAWALAQ 442



 Score = 57.4 bits (137), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 86/423 (20%), Positives = 167/423 (39%), Gaps = 43/423 (10%)

Query: 109 IFTSQSTKAIEDLTQLVEDTSVDPKIKVNAHIKRAVVHLHAASDFTKAFADLDEAEKVDP 168
           ++  +   A+ D  + +   ++DP     A+ +R  V L       ++ ADL  A +++P
Sbjct: 6   LYQDRREAALADFNRAI---AIDPDYAW-AYFQRGQV-LRELGRMEESLADLRRACELEP 60

Query: 169 NVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQRHFVVHKMIVPGDRERVE 228
           N A  + +RG+   L  +YEEAL    + I L P +  A   R  V   +       R  
Sbjct: 61  NDAAYHAERGETLRLMRRYEEALTAFSRAIELRPEYPWALGSRGQVWRAL------RRHH 114

Query: 229 QSLKEFRNFVDTHSNVVEACTLFAQVLVDQEDFDGAEEYFNRSIRVDPENASLYVHRAML 288
           ++L +F   +  +  +        + L        A E FN+++ +DP+      HR + 
Sbjct: 115 EALADFEAALALNPMLAWVHAERGETLRALRRLHEAIEAFNQALNIDPDYVWALGHRGIA 174

Query: 289 MLQARGNVDEAIKLIEKAISIDKSCMFAYETLGTIEVQRGRLEEAVKCFNKALPLARDEA 348
             + R +   AI   + AI++  +  + Y   G         E A+   N+A+ L   + 
Sbjct: 175 YRELR-DYPAAIADFDAAITLQDTIAWLYAERGETRRLADDFEGALFDLNRAIEL---DP 230

Query: 349 ELSHIYSLRDAAIAQMKVCER----YNIKKKVSPRSQNITKNEKLAIKQLRENND----- 399
           + +     R A    +   E     +N   ++ P  + +     L  + L   ++     
Sbjct: 231 QYAWALGSRGATFRALGDTEAALADFNRALELDPAYEWVYMQRGLLYRNLDRLDEALADF 290

Query: 400 ---IIIRPADKGG----KTVVMDKADYTQKMTSILNSNDYEIIPGDPTKTIEESEKYGNL 452
              + + P + G       ++  +  Y + +T    S+  E+ P          + Y   
Sbjct: 291 SRVLALNPNNVGALVERGELLRLRRHYNEALTDF--SHAIELQPDHAWAIGSRGQVY--- 345

Query: 453 ENESGQKHAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIAL 512
                   A + + +A AD + A +  P++     +RG+ Y L  QY EAL + ++ + L
Sbjct: 346 -------RALNRYHEALADFNNALEQKPDLVWILAERGETYRLLHQYNEALEDFNRALEL 398

Query: 513 NPN 515
            PN
Sbjct: 399 QPN 401



 Score = 55.1 bits (131), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 59/235 (25%), Positives = 103/235 (43%), Gaps = 34/235 (14%)

Query: 117 AIEDLTQLVEDTSVDPKIKVNAHIKRAVVHLHAASDFTKAFADLDEAEKVDPNVADSYYQ 176
           A+ DL + +E   +DP+       + A     A  D   A AD + A ++DP     Y Q
Sbjct: 218 ALFDLNRAIE---LDPQYAWALGSRGAT--FRALGDTEAALADFNRALELDPAYEWVYMQ 272

Query: 177 RGQIYCLFGQYEEALRNLDKTIALNPN--------FHVARAQRHF------VVHKM-IVP 221
           RG +Y    + +EAL +  + +ALNPN          + R +RH+        H + + P
Sbjct: 273 RGLLYRNLDRLDEALADFSRVLALNPNNVGALVERGELLRLRRHYNEALTDFSHAIELQP 332

Query: 222 ------GDRERVEQSLKEFRNFVDTHSNVVEACTLFAQVLVDQED-------FDGAEEYF 268
                 G R +V ++L  +   +   +N +E       +L ++ +       ++ A E F
Sbjct: 333 DHAWAIGSRGQVYRALNRYHEALADFNNALEQKPDLVWILAERGETYRLLHQYNEALEDF 392

Query: 269 NRSIRVDPENASLYVHRAMLMLQARGNVDEAIKLIEKAISIDKSCMFAYETLGTI 323
           NR++ + P N S  + R     QA    +EA   + +AI ID +  +A    G++
Sbjct: 393 NRALELQP-NDSWVLSRRGATYQALKIFEEAYIDLTRAIEIDPNNAWALAQRGSL 446



 Score = 48.1 bits (113), Expect = 0.013,   Method: Compositional matrix adjust.
 Identities = 61/273 (22%), Positives = 113/273 (41%), Gaps = 28/273 (10%)

Query: 268 FNRSIRVDPENASLYVHRAMLMLQARGNVDEAIKLIEKAISIDKS-CMFAYETLGTIEVQ 326
           FNR+I +DP+ A  Y  R   +L+  G ++E++  + +A  ++ +   +  E   T+ + 
Sbjct: 18  FNRAIAIDPDYAWAYFQRGQ-VLRELGRMEESLADLRRACELEPNDAAYHAERGETLRLM 76

Query: 327 RGRLEEAVKCFNKALPLARDEAELSHIYSLRDAAIAQMKVCER--------YNIKKKVSP 378
           R R EEA+  F++A+       EL   Y     +  Q+    R        +     ++P
Sbjct: 77  R-RYEEALTAFSRAI-------ELRPEYPWALGSRGQVWRALRRHHEALADFEAALALNP 128

Query: 379 RSQNITKNEKLAIKQLRENNDIIIRPADKGGKTVVMDKADYTQKM----TSILNSNDYEI 434
               +       ++ LR  ++ I    +   + + +D  DY   +     +     DY  
Sbjct: 129 MLAWVHAERGETLRALRRLHEAI----EAFNQALNIDP-DYVWALGHRGIAYRELRDYPA 183

Query: 435 IPGDPTKTIEESEKYGNLENESGQ-KHAASDFTKAFADLDEAEKVDPNVADSYYQRGQIY 493
              D    I   +    L  E G+ +  A DF  A  DL+ A ++DP  A +   RG  +
Sbjct: 184 AIADFDAAITLQDTIAWLYAERGETRRLADDFEGALFDLNRAIELDPQYAWALGSRGATF 243

Query: 494 CLFGQYEEALRNLDKTIALNPNFHVARAQRHFV 526
              G  E AL + ++ + L+P +     QR  +
Sbjct: 244 RALGDTEAALADFNRALELDPAYEWVYMQRGLL 276



 Score = 45.4 bits (106), Expect = 0.077,   Method: Compositional matrix adjust.
 Identities = 22/58 (37%), Positives = 34/58 (58%), Gaps = 3/58 (5%)

Query: 468 AFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPN---FHVARAQ 522
           A AD + A  +DP+ A +Y+QRGQ+    G+ EE+L +L +   L PN   +H  R +
Sbjct: 14  ALADFNRAIAIDPDYAWAYFQRGQVLRELGRMEESLADLRRACELEPNDAAYHAERGE 71



 Score = 40.8 bits (94), Expect = 1.9,   Method: Compositional matrix adjust.
 Identities = 22/63 (34%), Positives = 34/63 (53%)

Query: 467 KAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQRHFV 526
           ++ ADL  A +++PN A  + +RG+   L  +YEEAL    + I L P +  A   R  V
Sbjct: 47  ESLADLRRACELEPNDAAYHAERGETLRLMRRYEEALTAFSRAIELRPEYPWALGSRGQV 106

Query: 527 WTS 529
           W +
Sbjct: 107 WRA 109


>gi|428305620|ref|YP_007142445.1| hypothetical protein Cri9333_2057 [Crinalium epipsammum PCC 9333]
 gi|428247155|gb|AFZ12935.1| Tetratricopeptide TPR_1 repeat-containing protein [Crinalium
           epipsammum PCC 9333]
          Length = 343

 Score = 72.0 bits (175), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 72/293 (24%), Positives = 121/293 (41%), Gaps = 23/293 (7%)

Query: 63  DLLSKAKRAFEHEDYLTAIRHCTEEIESTSS----NHTKALARLLRATVYIFTSQSTKAI 118
           DL ++    + + DY  AI   T  I   S+     + + LAR             T AI
Sbjct: 56  DLFNRGVSKYSNADYNGAIADLTAAIRLDSTLAEAYYNRGLARRQLGDF-------TGAI 108

Query: 119 EDLTQLVEDTSVDPKIKVNAHIKRAVVHLHAASDFTKAFADLDEAEKVDPNVADSYYQRG 178
            D T  +    +DP   ++ +I R + +  A   +T+A AD   A  +D   A +Y+ R 
Sbjct: 109 ADYTNSIR---IDPSY-ISPYINRGIAY-AAQGKYTEAMADYTAAVNLDAKDAAAYFNRA 163

Query: 179 QIYCLFGQYEEALRNLDKTIALNPNFHVARAQRHFVVHKMIVPGDRERVEQSLKEFRNFV 238
             Y   G    A+++  +TI+L P +  A       +++ I   D    + ++ +F   +
Sbjct: 164 IAYDALGDRAAAIKDYTQTISLQPKYITA------YLNRGISRTDSGDYKSAIADFNTVL 217

Query: 239 DTHSNVVEACTLFAQVLVDQEDFDGAEEYFNRSIRVDPENASLYVHRAMLMLQARGNVDE 298
                +V              D  GA   +NR+I++ P NAS Y +R ++  + +GN   
Sbjct: 218 KLDPQLVAGYENRGIARRFLGDLKGAIADYNRAIQLSPNNASAYYNRGLVSYR-QGNKQA 276

Query: 299 AIKLIEKAISIDKSCMFAYETLGTIEVQRGRLEEAVKCFNKALPLARDEAELS 351
           AI    +AI +D     AY   G +  + G  E A+     A  L   + E S
Sbjct: 277 AIDDYTQAIRVDSRFARAYGNRGLLRYELGSREAALDDVRTAARLFSKQGETS 329



 Score = 40.4 bits (93), Expect = 2.6,   Method: Compositional matrix adjust.
 Identities = 19/66 (28%), Positives = 37/66 (56%)

Query: 451 NLENESGQKHAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTI 510
           +L N    K++ +D+  A ADL  A ++D  +A++YY RG      G +  A+ +   +I
Sbjct: 56  DLFNRGVSKYSNADYNGAIADLTAAIRLDSTLAEAYYNRGLARRQLGDFTGAIADYTNSI 115

Query: 511 ALNPNF 516
            ++P++
Sbjct: 116 RIDPSY 121


>gi|158334579|ref|YP_001515751.1| hypothetical protein AM1_1406 [Acaryochloris marina MBIC11017]
 gi|158304820|gb|ABW26437.1| TPR domain protein [Acaryochloris marina MBIC11017]
          Length = 783

 Score = 72.0 bits (175), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 93/414 (22%), Positives = 165/414 (39%), Gaps = 66/414 (15%)

Query: 131 DPKIKVNAHIKRAVVHLHAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEA 190
           +P   +N   KRA        D   A  D DEA  ++P  A +Y+ RG ++   G++E A
Sbjct: 29  NPDALINRANKRAT-----NGDLDGALGDFDEAIALNPAKATAYFNRGFLFNSLGKFEAA 83

Query: 191 LRNLDKTIALNPNFHVARAQRHFVVHKMIVPGDRERVEQSLKEFRNFVDTHSNVVEACTL 250
           + +  + I L P++  A  QR     +      R   +++++++   +  +   ++A   
Sbjct: 84  IHDFSEAIELLPDYDEAYFQRGNSYRQ------RGEFQRAIQDYSQAIRINPYCIKAYYK 137

Query: 251 FAQVLVDQEDFDGAEEYFNRSIRVDPENASLYVHRAMLMLQARGNVDEAIKLIEKAISID 310
            A    +  D  GA   F++ I   P++A+ Y  R + + Q+ G +++AI+    AI  +
Sbjct: 138 RADSRAELGDHPGALTDFSQVILRLPKDANAYCQRGIFLSQS-GELEKAIEDFTSAIEHN 196

Query: 311 KSCMFAYETLGTIEVQRGRLEEAVKCFNKAL---PLARDEAELSHIYSLRDAAIAQMKVC 367
                AY   G    Q G  E+A K F++AL   P    +A  +  Y+L    + +  V 
Sbjct: 197 PRLADAYFHRGYCLAQMGEAEKASKDFSEALLHDP--NHQAAYTRAYAL--GMLKETPV- 251

Query: 368 ERYNIKKKVSPRSQNITKNEKLAIKQLRENNDIIIRPADKGGKTVVMDKADYTQKMTSIL 427
                   VS  S   T      +  L E+  + + P                      +
Sbjct: 252 -------DVSSPSSTAT---DYPLSLLEESVPVSVEP----------------------V 279

Query: 428 NSNDYEIIPGDPTKTIEESEKYGNLENESGQKHAASDFTKAFADLDEAEKVDPNVADSYY 487
             +D E  P   T  +E +   G  E  +  +    D   A +D  +    DP  + +YY
Sbjct: 280 EDSDGEQEPHPATVPLEPTSMEGFFE-RANNRIQRGDLDGAISDYSKIIDTDPENSQAYY 338

Query: 488 QRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQRHFVWTSTLAELMAFSDEF 541
           QRGQ     G+ + A+ +L++ I             H+    +L  +  FS E 
Sbjct: 339 QRGQSLGALGESQAAMEDLNQAI-------------HWARVHSLGLMRDFSGEL 379



 Score = 64.7 bits (156), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 100/463 (21%), Positives = 185/463 (39%), Gaps = 71/463 (15%)

Query: 117 AIEDLTQLVEDTSVDPKIKVNAHIKRAVVHLHAASDFTKAFADLDEAEKVDPNVADSYYQ 176
           A+ D +Q++     D     NA+ +R +  L  + +  KA  D   A + +P +AD+Y+ 
Sbjct: 151 ALTDFSQVILRLPKD----ANAYCQRGIF-LSQSGELEKAIEDFTSAIEHNPRLADAYFH 205

Query: 177 RGQIYCL--FGQYEEALRNLDKTIALNPNFHVARAQRHFVVHKMIVPGDRERVEQSLKEF 234
           RG  YCL   G+ E+A ++  + +  +PN   A  + + +      P D      +  ++
Sbjct: 206 RG--YCLAQMGEAEKASKDFSEALLHDPNHQAAYTRAYALGMLKETPVDVSSPSSTATDY 263

Query: 235 RNFVDTHSNVVEACTLFAQVLVDQEDFDGAEEYFNRSIRVDPENASLYVHRAMLMLQARG 294
                  S + E+  +  + +   ED DG +E    ++ ++P +   +  RA   +Q RG
Sbjct: 264 -----PLSLLEESVPVSVEPV---EDSDGEQEPHPATVPLEPTSMEGFFERANNRIQ-RG 314

Query: 295 NVDEAIKLIEKAISIDKSCMFAYETLGTIEVQRGRLEEAVKCFNKALPLARDEAELSHIY 354
           ++D AI    K I  D     AY   G      G  + A++  N+A+  AR    +  + 
Sbjct: 315 DLDGAISDYSKIIDTDPENSQAYYQRGQSLGALGESQAAMEDLNQAIHWAR----VHSLG 370

Query: 355 SLRDAAIAQMKVCERYNIKKKVSPRSQNITKNEKLA------IKQLRENNDIIIRPADKG 408
            +RD +       E      K         K   L       ++Q   + D +I      
Sbjct: 371 LMRDFSGELSTTLETLKQDLKELSYQSPFAKTHPLPGTAADQMQQADPSADDVI------ 424

Query: 409 GKTVVMDKADYTQKMTSILNSNDYEIIPGDPTKTIEESEKYGNLENESGQKHAASDFT-- 466
              V  D+ D + ++ ++ NSN        PT   E +    +++ +S +  ++S FT  
Sbjct: 425 --DVSSDQPDASGELKTVENSNSSIT---QPTSAKESAVTDVSIDTQSSEPESSSIFTQK 479

Query: 467 ------------------------------KAFADLDEAEKVDPNVADSYYQRGQIYCLF 496
                                         +A A    A + +P  AD+++ RGQ   L 
Sbjct: 480 EPPAQVNPQPSSPQPQSPPPDAEIAAPTLERAIAQHTRAIEQNPLDADAFFNRGQSRALG 539

Query: 497 GQYEEALRNLDKTIALNPNFHVARAQRHFVWTSTLAELMAFSD 539
           G  + A+ +  +TI L+P+   A  +R    ++   E  A +D
Sbjct: 540 GDLQGAIEDYSRTIRLDPHNREAYVKRARCLSALGDETAAQAD 582


>gi|265985184|ref|ZP_06097919.1| TPR repeat-containing protein [Brucella sp. 83/13]
 gi|264663776|gb|EEZ34037.1| TPR repeat-containing protein [Brucella sp. 83/13]
          Length = 295

 Score = 72.0 bits (175), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 55/183 (30%), Positives = 87/183 (47%), Gaps = 7/183 (3%)

Query: 167 DPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQRHFVVHKMIVPGDRER 226
           +P   + Y  RG  Y   G+Y+EA+R+ D+ IALNPNF+ A A R  V   M   GD  +
Sbjct: 76  NPRDPEGYNVRGSAYGKAGRYKEAMRDFDQAIALNPNFYQAYANRALVDRYM---GDNNK 132

Query: 227 VEQSLKEFRNFVDTHSNVVEACTLFAQVLVDQEDFDGAEEYFNRSIRVDPENASLYVHRA 286
              +++++   +  +     A      V       D A   FN++I +   +   Y +R 
Sbjct: 133 ---AVQDYSRAIQLNPQYDAAYIGRGNVYRQAGRLDQALNNFNQAIALRTTDGRAYHNRG 189

Query: 287 MLMLQARGNVDEAIKLIEKAISIDKSCMFAYETLGTIEVQRGRLEEAVKCFNKALPLARD 346
            L+ QA+G   +AI+   KAIS++ +    Y   G   V  G  + A   FN A+ L ++
Sbjct: 190 -LIYQAKGLHKQAIEDFSKAISLNSTAPEPYNGRGISYVALGDFDNAFDDFNTAITLDQN 248

Query: 347 EAE 349
            AE
Sbjct: 249 VAE 251



 Score = 51.6 bits (122), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 49/208 (23%), Positives = 93/208 (44%), Gaps = 12/208 (5%)

Query: 103 LRATVYIFTSQSTKAIEDLTQLVEDTSVDPKIKVNAHIKRAVVHLHAASDFTKAFADLDE 162
           +R + Y    +  +A+ D  Q +   +++P     A+  RA+V  +   D  KA  D   
Sbjct: 85  VRGSAYGKAGRYKEAMRDFDQAI---ALNPNF-YQAYANRALVDRYMG-DNNKAVQDYSR 139

Query: 163 AEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQRHFVVHKMIVPG 222
           A +++P    +Y  RG +Y   G+ ++AL N ++ IAL      A   R  +     +  
Sbjct: 140 AIQLNPQYDAAYIGRGNVYRQAGRLDQALNNFNQAIALRTTDGRAYHNRGLIYQAKGLH- 198

Query: 223 DRERVEQSLKEFRNFVDTHSNVVEACTLFAQVLVDQEDFDGAEEYFNRSIRVDPENASLY 282
                +Q++++F   +  +S   E         V   DFD A + FN +I +D   A  +
Sbjct: 199 -----KQAIEDFSKAISLNSTAPEPYNGRGISYVALGDFDNAFDDFNTAITLDQNVAESW 253

Query: 283 VHRAMLMLQARGNVDEAIKLIEKAISID 310
            ++A L+ +  G+  +A     +A+ +D
Sbjct: 254 ANQA-LVYEHNGDKAKAANSYARAVQLD 280



 Score = 48.1 bits (113), Expect = 0.010,   Method: Compositional matrix adjust.
 Identities = 22/48 (45%), Positives = 30/48 (62%)

Query: 479 DPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQRHFV 526
           +P   + Y  RG  Y   G+Y+EA+R+ D+ IALNPNF+ A A R  V
Sbjct: 76  NPRDPEGYNVRGSAYGKAGRYKEAMRDFDQAIALNPNFYQAYANRALV 123



 Score = 40.0 bits (92), Expect = 3.1,   Method: Compositional matrix adjust.
 Identities = 24/85 (28%), Positives = 47/85 (55%), Gaps = 1/85 (1%)

Query: 268 FNRSIRVDPENASLYVHRAMLMLQARGNVDEAIKLIEKAISIDKSCMFAYETLGTIEVQR 327
           F+++I ++P     Y +RA L+ +  G+ ++A++   +AI ++     AY   G +  Q 
Sbjct: 103 FDQAIALNPNFYQAYANRA-LVDRYMGDNNKAVQDYSRAIQLNPQYDAAYIGRGNVYRQA 161

Query: 328 GRLEEAVKCFNKALPLARDEAELSH 352
           GRL++A+  FN+A+ L   +    H
Sbjct: 162 GRLDQALNNFNQAIALRTTDGRAYH 186



 Score = 40.0 bits (92), Expect = 3.6,   Method: Compositional matrix adjust.
 Identities = 27/105 (25%), Positives = 50/105 (47%), Gaps = 5/105 (4%)

Query: 104 RATVYIFTSQSTKAIEDLTQLVEDTSVDPKIKVNAHIKRAVVHLHAASDFTKAFADLDEA 163
           R  +Y       +AIED ++ +   S  P+     +  R + ++ A  DF  AF D + A
Sbjct: 188 RGLIYQAKGLHKQAIEDFSKAISLNSTAPE----PYNGRGISYV-ALGDFDNAFDDFNTA 242

Query: 164 EKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVAR 208
             +D NVA+S+  +  +Y   G   +A  +  + + L+P +  A+
Sbjct: 243 ITLDQNVAESWANQALVYEHNGDKAKAANSYARAVQLDPKYKPAK 287


>gi|261216409|ref|ZP_05930690.1| TPR repeat-containing protein [Brucella abortus bv. 3 str. Tulya]
 gi|260918016|gb|EEX84877.1| TPR repeat-containing protein [Brucella abortus bv. 3 str. Tulya]
          Length = 295

 Score = 72.0 bits (175), Expect = 8e-10,   Method: Compositional matrix adjust.
 Identities = 55/183 (30%), Positives = 87/183 (47%), Gaps = 7/183 (3%)

Query: 167 DPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQRHFVVHKMIVPGDRER 226
           +P   + Y  RG  Y   G+Y+EA+R+ D+ IALNPNF+ A A R  V   M   GD  +
Sbjct: 76  NPRDPEGYNVRGSAYGKAGRYKEAMRDFDQAIALNPNFYQAYANRALVDRYM---GDNNK 132

Query: 227 VEQSLKEFRNFVDTHSNVVEACTLFAQVLVDQEDFDGAEEYFNRSIRVDPENASLYVHRA 286
              +++++   +  +     A      V       D A   FN++I +   +   Y +R 
Sbjct: 133 ---AMQDYSRAIQLNPQYDAAYIGRGNVYRQAGHLDQALNDFNQAIALRTTDGRAYHNRG 189

Query: 287 MLMLQARGNVDEAIKLIEKAISIDKSCMFAYETLGTIEVQRGRLEEAVKCFNKALPLARD 346
            L+ QA+G   +AI+   KAIS++ +    Y   G   V  G  + A   FN A+ L ++
Sbjct: 190 -LIYQAKGLHKQAIEDFSKAISLNSTAPEPYNGRGISYVALGDYDNAFDDFNTAITLDQN 248

Query: 347 EAE 349
            AE
Sbjct: 249 VAE 251



 Score = 49.3 bits (116), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 47/208 (22%), Positives = 92/208 (44%), Gaps = 12/208 (5%)

Query: 103 LRATVYIFTSQSTKAIEDLTQLVEDTSVDPKIKVNAHIKRAVVHLHAASDFTKAFADLDE 162
           +R + Y    +  +A+ D  Q +   +++P     A+  RA+V  +   D  KA  D   
Sbjct: 85  VRGSAYGKAGRYKEAMRDFDQAI---ALNPNF-YQAYANRALVDRYMG-DNNKAMQDYSR 139

Query: 163 AEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQRHFVVHKMIVPG 222
           A +++P    +Y  RG +Y   G  ++AL + ++ IAL      A   R  +     +  
Sbjct: 140 AIQLNPQYDAAYIGRGNVYRQAGHLDQALNDFNQAIALRTTDGRAYHNRGLIYQAKGLH- 198

Query: 223 DRERVEQSLKEFRNFVDTHSNVVEACTLFAQVLVDQEDFDGAEEYFNRSIRVDPENASLY 282
                +Q++++F   +  +S   E         V   D+D A + FN +I +D   A  +
Sbjct: 199 -----KQAIEDFSKAISLNSTAPEPYNGRGISYVALGDYDNAFDDFNTAITLDQNVAESW 253

Query: 283 VHRAMLMLQARGNVDEAIKLIEKAISID 310
            ++A L+ +  G+  +A     +A+ +D
Sbjct: 254 ANQA-LVYEHNGDKAKAANSYARAVQLD 280



 Score = 48.1 bits (113), Expect = 0.011,   Method: Compositional matrix adjust.
 Identities = 22/48 (45%), Positives = 30/48 (62%)

Query: 479 DPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQRHFV 526
           +P   + Y  RG  Y   G+Y+EA+R+ D+ IALNPNF+ A A R  V
Sbjct: 76  NPRDPEGYNVRGSAYGKAGRYKEAMRDFDQAIALNPNFYQAYANRALV 123



 Score = 38.9 bits (89), Expect = 7.1,   Method: Compositional matrix adjust.
 Identities = 26/105 (24%), Positives = 50/105 (47%), Gaps = 5/105 (4%)

Query: 104 RATVYIFTSQSTKAIEDLTQLVEDTSVDPKIKVNAHIKRAVVHLHAASDFTKAFADLDEA 163
           R  +Y       +AIED ++ +   S  P+     +  R + ++ A  D+  AF D + A
Sbjct: 188 RGLIYQAKGLHKQAIEDFSKAISLNSTAPE----PYNGRGISYV-ALGDYDNAFDDFNTA 242

Query: 164 EKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVAR 208
             +D NVA+S+  +  +Y   G   +A  +  + + L+P +  A+
Sbjct: 243 ITLDQNVAESWANQALVYEHNGDKAKAANSYARAVQLDPKYKPAK 287



 Score = 38.5 bits (88), Expect = 9.3,   Method: Compositional matrix adjust.
 Identities = 27/105 (25%), Positives = 44/105 (41%), Gaps = 15/105 (14%)

Query: 423 MTSILNSNDYEIIPGDPTKTIEESEKYGNLENESGQKHAASDFTKAFADLDEAEKVDPNV 482
           +TS++ SN     P DP         YG           A  + +A  D D+A  ++PN 
Sbjct: 69  LTSVIQSN-----PRDPEGYNVRGSAYGK----------AGRYKEAMRDFDQAIALNPNF 113

Query: 483 ADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQRHFVW 527
             +Y  R  +    G   +A+++  + I LNP +  A   R  V+
Sbjct: 114 YQAYANRALVDRYMGDNNKAMQDYSRAIQLNPQYDAAYIGRGNVY 158


>gi|17988679|ref|NP_541312.1| TPR repeat-containing protein [Brucella melitensis bv. 1 str. 16M]
 gi|17984487|gb|AAL53576.1| tetratricopeptide repeat family protein [Brucella melitensis bv. 1
           str. 16M]
          Length = 255

 Score = 72.0 bits (175), Expect = 8e-10,   Method: Compositional matrix adjust.
 Identities = 55/183 (30%), Positives = 87/183 (47%), Gaps = 7/183 (3%)

Query: 167 DPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQRHFVVHKMIVPGDRER 226
           +P   + Y  RG  Y   G+Y+EA+R+ D+ IALNPNF+ A A R  V   M   GD  +
Sbjct: 36  NPRDPEGYNVRGSAYGKAGRYKEAMRDFDQAIALNPNFYQAYANRALVDRYM---GDNNK 92

Query: 227 VEQSLKEFRNFVDTHSNVVEACTLFAQVLVDQEDFDGAEEYFNRSIRVDPENASLYVHRA 286
              +++++   +  +     A      V       D A   FN++I +   +   Y +R 
Sbjct: 93  ---AVQDYSRAIQLNPQYDAAYIGRGNVYRQAGHLDQALNDFNQAIALRTTDGRAYHNRG 149

Query: 287 MLMLQARGNVDEAIKLIEKAISIDKSCMFAYETLGTIEVQRGRLEEAVKCFNKALPLARD 346
            L+ QA+G   +AI+   KAIS++ +    Y   G   V  G  + A   FN A+ L ++
Sbjct: 150 -LIYQAKGLHKQAIEDFSKAISLNSTAPEPYNGRGISYVALGDYDNAFDDFNTAITLDQN 208

Query: 347 EAE 349
            AE
Sbjct: 209 VAE 211



 Score = 48.9 bits (115), Expect = 0.008,   Method: Compositional matrix adjust.
 Identities = 47/208 (22%), Positives = 92/208 (44%), Gaps = 12/208 (5%)

Query: 103 LRATVYIFTSQSTKAIEDLTQLVEDTSVDPKIKVNAHIKRAVVHLHAASDFTKAFADLDE 162
           +R + Y    +  +A+ D  Q +   +++P     A+  RA+V  +   D  KA  D   
Sbjct: 45  VRGSAYGKAGRYKEAMRDFDQAI---ALNPNF-YQAYANRALVDRYMG-DNNKAVQDYSR 99

Query: 163 AEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQRHFVVHKMIVPG 222
           A +++P    +Y  RG +Y   G  ++AL + ++ IAL      A   R  +     +  
Sbjct: 100 AIQLNPQYDAAYIGRGNVYRQAGHLDQALNDFNQAIALRTTDGRAYHNRGLIYQAKGLH- 158

Query: 223 DRERVEQSLKEFRNFVDTHSNVVEACTLFAQVLVDQEDFDGAEEYFNRSIRVDPENASLY 282
                +Q++++F   +  +S   E         V   D+D A + FN +I +D   A  +
Sbjct: 159 -----KQAIEDFSKAISLNSTAPEPYNGRGISYVALGDYDNAFDDFNTAITLDQNVAESW 213

Query: 283 VHRAMLMLQARGNVDEAIKLIEKAISID 310
            ++A L+ +  G+  +A     +A+ +D
Sbjct: 214 ANQA-LVYEHNGDKAKAANSYARAVQLD 240



 Score = 47.8 bits (112), Expect = 0.013,   Method: Compositional matrix adjust.
 Identities = 22/48 (45%), Positives = 30/48 (62%)

Query: 479 DPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQRHFV 526
           +P   + Y  RG  Y   G+Y+EA+R+ D+ IALNPNF+ A A R  V
Sbjct: 36  NPRDPEGYNVRGSAYGKAGRYKEAMRDFDQAIALNPNFYQAYANRALV 83



 Score = 38.5 bits (88), Expect = 9.0,   Method: Compositional matrix adjust.
 Identities = 26/105 (24%), Positives = 50/105 (47%), Gaps = 5/105 (4%)

Query: 104 RATVYIFTSQSTKAIEDLTQLVEDTSVDPKIKVNAHIKRAVVHLHAASDFTKAFADLDEA 163
           R  +Y       +AIED ++ +   S  P+     +  R + ++ A  D+  AF D + A
Sbjct: 148 RGLIYQAKGLHKQAIEDFSKAISLNSTAPE----PYNGRGISYV-ALGDYDNAFDDFNTA 202

Query: 164 EKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVAR 208
             +D NVA+S+  +  +Y   G   +A  +  + + L+P +  A+
Sbjct: 203 ITLDQNVAESWANQALVYEHNGDKAKAANSYARAVQLDPKYKPAK 247


>gi|150402041|ref|YP_001329335.1| hypothetical protein MmarC7_0114 [Methanococcus maripaludis C7]
 gi|150033071|gb|ABR65184.1| TPR repeat-containing protein [Methanococcus maripaludis C7]
          Length = 602

 Score = 72.0 bits (175), Expect = 8e-10,   Method: Compositional matrix adjust.
 Identities = 94/413 (22%), Positives = 188/413 (45%), Gaps = 39/413 (9%)

Query: 129 SVDPKIKVNAHIKRAVVH----LHAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLF 184
           S D  +++N +   A+V     L+A ++  KA    D+A +++ +  D++  +G      
Sbjct: 50  SFDETLRINPYNMEALVSKGYILYAINESEKAIECFDKALEINSDYYDTWQYKGYALHDL 109

Query: 185 GQYEEALRNLDKTIAL---NPNFHVARAQRHFVVHKMIVPGDRERVEQSLKEFRNFVDTH 241
            +YEEA+   DK++ +   NP  +  +    + +         ER E++++     ++T+
Sbjct: 110 ERYEEAIECFDKSLEIYEENPEVYYMKGASLYGL---------ERYEEAIECLDIALETY 160

Query: 242 SNVVEACTLFAQVLVDQEDFDGAEEYFNRSIR-VDPENASLYVHRAMLMLQARGNVDEAI 300
            N +   T     L + E ++ A E F+++++ V   NA       +  L+      EA+
Sbjct: 161 PNNIYMLTDKGNTLYELERYEEAIECFDKALKYVSYLNAWNDKGNTLCKLE---RYSEAV 217

Query: 301 KLIEKAISIDKSCMFAYETLGTIEVQRGRLEEAVKCFNKALPLARDEAELSH-----IYS 355
           +  +KA+ ID S    +   G    + G+ E+A+ CF+++L L  D  E ++     +Y 
Sbjct: 218 QCYDKALEIDSSSYVLWGNKGYAIYELGKYEKAIICFDRSLELNFDYLESNYYKGDSLYE 277

Query: 356 LR--DAAIAQMKVCERYNIKKKVSPRSQNITKNEKLAIKQLRENNDIIIRPADKGGKTVV 413
           L   + AI      E Y+   ++ P+++ I  ++  ++  L E  +  I   DK  +   
Sbjct: 278 LERYEEAI------ECYDKALEIDPKNEYIWYSKGCSLSNL-ERYEEAIECLDKALEIDS 330

Query: 414 MDKADYTQKMTSILNSNDYEIIPGDPTKTIEESEKYGNLENESGQKHAASD-FTKAFADL 472
            ++  + +K  S+     YE       K +E   K     N  G   A  + + +A    
Sbjct: 331 KNEKFWNKKGYSLNELERYEEASECLDKALEIDSKNEKFWNNKGYALAGLERYEEAITCY 390

Query: 473 DEAEKVDPNVADSYYQRGQIYCLFG--QYEEALRNLDKTIALNPNFHVARAQR 523
           DEA +++ N + +Y  +G  Y L G  +YEEA+   DK + ++ N+  A+  +
Sbjct: 391 DEALELNNNYSKAYKNKG--YSLAGLERYEEAIECYDKALEIDSNYTKAQQNK 441



 Score = 57.8 bits (138), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 82/408 (20%), Positives = 170/408 (41%), Gaps = 82/408 (20%)

Query: 172 DSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQRHFVVHKMIVPGDRERVEQSL 231
           +++  +G   C   +Y EA++  DK + ++ + +V    + + ++++       + E+++
Sbjct: 198 NAWNDKGNTLCKLERYSEAVQCYDKALEIDSSSYVLWGNKGYAIYEL------GKYEKAI 251

Query: 232 KEFRNFVDTHSNVVEACTLFAQVLVDQEDFDGAEEYFNRSIRVDPENASLYVHRAMLMLQ 291
             F   ++ + + +E+       L + E ++ A E +++++ +DP+N  ++  +    L 
Sbjct: 252 ICFDRSLELNFDYLESNYYKGDSLYELERYEEAIECYDKALEIDPKNEYIWYSKGC-SLS 310

Query: 292 ARGNVDEAIKLIEKAISIDKSCMFAYETLGTIEVQRGRLEEAVKCFNKALPL-------- 343
                +EAI+ ++KA+ ID      +   G    +  R EEA +C +KAL +        
Sbjct: 311 NLERYEEAIECLDKALEIDSKNEKFWNKKGYSLNELERYEEASECLDKALEIDSKNEKFW 370

Query: 344 ------------------ARDEA-ELSHIYSL----RDAAIAQMK----VCERYNIKKKV 376
                               DEA EL++ YS     +  ++A ++      E Y+   ++
Sbjct: 371 NNKGYALAGLERYEEAITCYDEALELNNNYSKAYKNKGYSLAGLERYEEAIECYDKALEI 430

Query: 377 SPRSQNITKNEKLAIKQLR------ENNDIIIRPADKGGKTVVMDKAD-------YTQKM 423
                   +N+  A+ +L       E  D++I   DK  +    DK +       Y + +
Sbjct: 431 DSNYTKAQQNKGNALFELGKYEEALECYDLVI-AVDKSNEKAWADKGNALFELERYEEAI 489

Query: 424 TSI-----LNSNDYEII--PGDPTKTIEESEKYGNLENESGQKHAASDFTKAFADLDEAE 476
                   L+SND EI    GD    +E  E+                   +    DEA 
Sbjct: 490 ECFDKAIELDSNDKEIWNNKGDTLYKLERYEE-------------------SIECYDEAL 530

Query: 477 KVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQRH 524
           ++D    + +  +G I+     YEEAL+  D+ + +N NF +A+  + 
Sbjct: 531 ELDSEDEELWNNKGNIFFKLENYEEALKCYDRALEINTNFELAKLGKQ 578



 Score = 52.4 bits (124), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 50/224 (22%), Positives = 103/224 (45%), Gaps = 11/224 (4%)

Query: 130 VDPKIKVNAHIKRA-VVHLHAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYE 188
           +DPK   N +I  +    L     + +A   LD+A ++D      + ++G       +YE
Sbjct: 294 IDPK---NEYIWYSKGCSLSNLERYEEAIECLDKALEIDSKNEKFWNKKGYSLNELERYE 350

Query: 189 EALRNLDKTIALNPNFHVARAQRHFVVHKMIVPGDRERVEQSLKEFRNFVDTHSNVVEAC 248
           EA   LDK + ++           F  +K       ER E+++  +   ++ ++N  +A 
Sbjct: 351 EASECLDKALEIDS------KNEKFWNNKGYALAGLERYEEAITCYDEALELNNNYSKAY 404

Query: 249 TLFAQVLVDQEDFDGAEEYFNRSIRVDPENASLYVHRAMLMLQARGNVDEAIKLIEKAIS 308
                 L   E ++ A E +++++ +D        ++   + +  G  +EA++  +  I+
Sbjct: 405 KNKGYSLAGLERYEEAIECYDKALEIDSNYTKAQQNKGNALFEL-GKYEEALECYDLVIA 463

Query: 309 IDKSCMFAYETLGTIEVQRGRLEEAVKCFNKALPLARDEAELSH 352
           +DKS   A+   G    +  R EEA++CF+KA+ L  ++ E+ +
Sbjct: 464 VDKSNEKAWADKGNALFELERYEEAIECFDKAIELDSNDKEIWN 507



 Score = 47.4 bits (111), Expect = 0.018,   Method: Compositional matrix adjust.
 Identities = 61/278 (21%), Positives = 123/278 (44%), Gaps = 24/278 (8%)

Query: 260 DFDGAEEYFNRSIRVDPENASLYVHRAMLMLQARGNVDEAIKLIEKAISIDKSCMFAYET 319
           +F+ + E F+ ++R++P N    V +  + L A    ++AI+  +KA+ I+      ++ 
Sbjct: 43  NFEKSIESFDETLRINPYNMEALVSKGYI-LYAINESEKAIECFDKALEINSDYYDTWQY 101

Query: 320 LGTIEVQRGRLEEAVKCFNKALPLARDEAELSHIYSLRDAAIAQMKVCERY-------NI 372
            G       R EEA++CF+K+L +  +  E   +Y ++ A++  +   ERY       +I
Sbjct: 102 KGYALHDLERYEEAIECFDKSLEIYEENPE---VYYMKGASLYGL---ERYEEAIECLDI 155

Query: 373 KKKVSPRSQNITKNEKLAIKQLRENNDIIIRPADKGGKTVVMDKADYTQKMTSILNSNDY 432
             +  P +  +  ++   + +L E  +  I   DK  K V    A +  K  ++     Y
Sbjct: 156 ALETYPNNIYMLTDKGNTLYEL-ERYEEAIECFDKALKYVSYLNA-WNDKGNTLCKLERY 213

Query: 433 EIIPGDPTKTIE-ESEKYGNLENESGQKHAASDFTKAFADLDEAEKVDPNVADSYYQRGQ 491
                   K +E +S  Y    N+    +    + KA    D + +++ +  +S Y +G 
Sbjct: 214 SEAVQCYDKALEIDSSSYVLWGNKGYAIYELGKYEKAIICFDRSLELNFDYLESNYYKGD 273

Query: 492 IYCLFGQYEEALRNLDKTIALNPNFHVARAQRHFVWTS 529
                 +YEEA+   DK + ++P       +  ++W S
Sbjct: 274 SLYELERYEEAIECYDKALEIDP-------KNEYIWYS 304


>gi|20090471|ref|NP_616546.1| hypothetical protein MA1613 [Methanosarcina acetivorans C2A]
 gi|19915489|gb|AAM05026.1| TPR-domain containing protein [Methanosarcina acetivorans C2A]
          Length = 1885

 Score = 72.0 bits (175), Expect = 8e-10,   Method: Compositional matrix adjust.
 Identities = 86/391 (21%), Positives = 170/391 (43%), Gaps = 38/391 (9%)

Query: 155 KAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQRHFV 214
           +A    ++A +++P  +D+ Y++G  +   G++EEAL   +  +  +P+           
Sbjct: 57  EALDSFNDALQLEPGNSDALYRKGTCFAALGRFEEALEAYESALESSPDTPEIWYMMGLA 116

Query: 215 VHKMIVPGDRERVEQSLKEFRNFVDTHSNVVEACTLFAQVLVDQEDFDGAEEYFNRSIRV 274
             +M      ER E S+  F   ++       AC     V    E ++ A E F R++ +
Sbjct: 117 FAEM------ERAEASILCFEKALELKPEYTAACCAMGTVAGKAERYEEALEDFERALEI 170

Query: 275 DPENASLYVHRAMLM--LQARGNVDEAIKLI-----EKAISIDKSCMFAYETLGTIEVQR 327
            P N+  +  + +++  ++   N  E    +     +   ++++ C+     LG  E   
Sbjct: 171 SPRNSEAWYAKGLILAKIEKYENALECFDFLIREKPKDTAALEQKCLI-LANLGKNEEAL 229

Query: 328 GRLEEAVKCFNKALPLARDEAELSHIYSLRDAAIAQMKVCERYNIKK--KVSPRSQNITK 385
           G LE+ +K F        +EA L H   L  + +++ +  ER  I K  K++P  +    
Sbjct: 230 GALEDFLKKF------PANEAALYHKGILL-SELSRYEDAER-TISKVLKLNPGHREAWF 281

Query: 386 NEKLAIKQLRENNDIIIRPADKGGKTVVMDKA---DYTQKMTSILNSNDYEIIPGDPTKT 442
            +  A+ QL   N+ I    +   + + +D A    +  K  +++    YE    +   T
Sbjct: 282 RKGFALVQLLRLNEAI----EAFDEAIRLDPAYFEAWNYKCFALMKLEVYEEAL-EAFDT 336

Query: 443 IEESEKYGNLE----NESGQKHAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQ 498
           I E+  Y ++E    N +       +F +A        ++DP   D+++Q+G++    G+
Sbjct: 337 ILET--YPDMEEIWYNRALALLKLQNFPEAARSFARVTELDPGNTDAWFQQGRLLARAGK 394

Query: 499 YEEALRNLDKTIALNPNFHVARAQRHFVWTS 529
           YEEAL   D+ +  +P+F  A+  R  V T 
Sbjct: 395 YEEALETFDRLLEYHPDFTEAQKFRGTVLTG 425



 Score = 58.9 bits (141), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 89/430 (20%), Positives = 172/430 (40%), Gaps = 61/430 (14%)

Query: 100 ARLLRATVYIFTSQSTKAIEDLTQLVEDTSVDPKIKVNAHIKRAVVHLHAASDFTKAFAD 159
           A+  R TV     +  +A+E LT+ +E    +P+   N  I++ ++ L     F  A   
Sbjct: 415 AQKFRGTVLTGLGRFEEALESLTKSLEK---EPE-NYNMWIQKGLLLLDIGK-FEPALEA 469

Query: 160 LDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQRHFVVHKMI 219
            + A  + P+    +  RG        YEEAL    + + LNP       ++  V+ K+ 
Sbjct: 470 FENAAGLKPDDEICWMNRGFALYSLECYEEALEAFKEGLHLNPYLEKGWNKKGIVLGKLG 529

Query: 220 VPGDRERVEQSLKEFR-NFVDTHSNVVEACTLFAQVLVDQEDFDGAEEYFNRSIRVDPEN 278
              +     +   + R +F D   N+     LFA      E+++ AEE F   ++ +PE+
Sbjct: 530 KTEEALEAFEEAVKLRPDFEDAWKNM--GLLLFAS-----EEYEKAEEAFAEVLKTNPED 582

Query: 279 ASLYVHRAMLMLQARGNVDEAIKLIEKAISIDKSCMFAYETLGTIEVQRGRLEEAVKCFN 338
                +R + +L+  G  + A++ +EK +S+         +LG   ++ G LE+A++ F 
Sbjct: 583 LDALYNRGISLLRL-GRNETALEYLEKVVSLSPDYPDLAYSLGVALMELGELEKALETFE 641

Query: 339 KALPLARDEAELSHIYSLRDAAIAQMKVCERYNIKKKVSPRSQNITKNEKLAIKQLRENN 398
           K      ++ E+                C +  +  ++      +   EK+         
Sbjct: 642 KLAAKNPEDLEIQ---------------CRKGKLAMELGEHETALQAFEKV--------- 677

Query: 399 DIIIRPADKGGKTVVMDKADYTQKMTSILNSNDYEIIPGDPTKTIEE-----SEKYGNLE 453
            ++ +P  +           + +K  ++LN   +E    D  K  +E     + K  + E
Sbjct: 678 -LLEKPGSREA---------WYRKGLALLNMERFE----DAVKAFDEVIVRNTTKDPSYE 723

Query: 454 NESGQKHAA----SDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKT 509
           +    K  A     +F  A    + A + +P+   ++Y +G       + EEA R  +  
Sbjct: 724 DAGTLKGFAQMQLGNFLPALETFEGALEKNPDSGITWYYKGLTLQELQRQEEAARAFESA 783

Query: 510 IALNPNFHVA 519
           + LNP F  A
Sbjct: 784 LRLNPEFSDA 793



 Score = 57.0 bits (136), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 46/214 (21%), Positives = 96/214 (44%), Gaps = 17/214 (7%)

Query: 128 TSVDPKIKVNAHIKRAVVHLHAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQY 187
            +++ K  + A++ +    L A  DF K F          P    + Y +G +     +Y
Sbjct: 210 AALEQKCLILANLGKNEEALGALEDFLKKF----------PANEAALYHKGILLSELSRY 259

Query: 188 EEALRNLDKTIALNPNFHVARAQRHFVVHKMIVPGDRERVEQSLKEFRNFVDTHSNVVEA 247
           E+A R + K + LNP    A  ++ F + +++      R+ ++++ F   +       EA
Sbjct: 260 EDAERTISKVLKLNPGHREAWFRKGFALVQLL------RLNEAIEAFDEAIRLDPAYFEA 313

Query: 248 CTLFAQVLVDQEDFDGAEEYFNRSIRVDPENASLYVHRAMLMLQARGNVDEAIKLIEKAI 307
                  L+  E ++ A E F+  +   P+   ++ +RA+ +L+ + N  EA +   +  
Sbjct: 314 WNYKCFALMKLEVYEEALEAFDTILETYPDMEEIWYNRALALLKLQ-NFPEAARSFARVT 372

Query: 308 SIDKSCMFAYETLGTIEVQRGRLEEAVKCFNKAL 341
            +D     A+   G +  + G+ EEA++ F++ L
Sbjct: 373 ELDPGNTDAWFQQGRLLARAGKYEEALETFDRLL 406



 Score = 52.8 bits (125), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 84/407 (20%), Positives = 174/407 (42%), Gaps = 51/407 (12%)

Query: 143 AVVHLHAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNP 202
           A++ L    +  ++FA + E   +DP   D+++Q+G++    G+YEEAL   D+ +  +P
Sbjct: 354 ALLKLQNFPEAARSFARVTE---LDPGNTDAWFQQGRLLARAGKYEEALETFDRLLEYHP 410

Query: 203 NFHVARAQRHFVVHKMIVPGDRERVEQSLKEFRNFVDTHSNVVEACTLFAQVLVDQEDFD 262
           +F  A+  R  V+  +       R E++L+     ++              +L+D   F+
Sbjct: 411 DFTEAQKFRGTVLTGL------GRFEEALESLTKSLEKEPENYNMWIQKGLLLLDIGKFE 464

Query: 263 GAEEYFNRSIRVDPENASLYVHRAMLMLQARGNVDEAIKLIEKAISIDKSCMFAYETLGT 322
            A E F  +  + P++   +++R    L +    +EA++  ++ + ++      +   G 
Sbjct: 465 PALEAFENAAGLKPDDEICWMNRG-FALYSLECYEEALEAFKEGLHLNPYLEKGWNKKGI 523

Query: 323 IEVQRGRLEEAVKCFNKALPLARD-EAELSHIYSLRDAAIAQMKVCERYNIKKKVSPRSQ 381
           +  + G+ EEA++ F +A+ L  D E    ++  L  A+    K  E +    K +P   
Sbjct: 524 VLGKLGKTEEALEAFEEAVKLRPDFEDAWKNMGLLLFASEEYEKAEEAFAEVLKTNPEDL 583

Query: 382 NITKNEKLAIKQLRENNDIIIRPADKGGKTVVMDKADYTQKMTSILNSNDYEIIP----- 436
           +   N  +++ +L  N   +                +Y +K+ S+  S DY  +      
Sbjct: 584 DALYNRGISLLRLGRNETAL----------------EYLEKVVSL--SPDYPDLAYSLGV 625

Query: 437 -----GDPTKTIEESEKYG-----NLENESGQKHAASDFTKAFADLDEAEKV---DPNVA 483
                G+  K +E  EK       +LE +  +   A +  +    L   EKV    P   
Sbjct: 626 ALMELGELEKALETFEKLAAKNPEDLEIQCRKGKLAMELGEHETALQAFEKVLLEKPGSR 685

Query: 484 DSYYQRGQIYCLFGQYEEALRNLDKTIALN----PNFHVARAQRHFV 526
           +++Y++G       ++E+A++  D+ I  N    P++  A   + F 
Sbjct: 686 EAWYRKGLALLNMERFEDAVKAFDEVIVRNTTKDPSYEDAGTLKGFA 732



 Score = 51.2 bits (121), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 70/315 (22%), Positives = 120/315 (38%), Gaps = 48/315 (15%)

Query: 224 RERVEQSLKEFRNFVDTHSNVVEACTLFAQVLVDQEDFDGAEEYFNRSIRVDPENASLYV 283
           R+R E+++  F   +D   +  EA       L++ E    A + FN +++++P N+   +
Sbjct: 18  RKRYEKAINTFNKILDKDPDHKEALFHRGLALLETEKTQEALDSFNDALQLEPGNSDA-L 76

Query: 284 HRAMLMLQARGNVDEAIKLIEKAISIDKSCMFAYETLGTIEVQRGRLEEAVKCFNKALPL 343
           +R      A G  +EA++  E A+         +  +G    +  R E ++ CF KAL L
Sbjct: 77  YRKGTCFAALGRFEEALEAYESALESSPDTPEIWYMMGLAFAEMERAEASILCFEKALEL 136

Query: 344 ARD-EAELSHIYSLRDAAIAQMKVCERYNIKKKVSPRSQNITKNEKLAIKQLR------E 396
             +  A    + ++   A    +  E +    ++SPR+      + L + ++       E
Sbjct: 137 KPEYTAACCAMGTVAGKAERYEEALEDFERALEISPRNSEAWYAKGLILAKIEKYENALE 196

Query: 397 NNDIIIRPADKGGKTVVMDKADYTQKMTSILNSNDYEIIPGDPTKTIEESEKYGNLENES 456
             D +IR   K       D A   QK   + N    E             E  G LE   
Sbjct: 197 CFDFLIREKPK-------DTAALEQKCLILANLGKNE-------------EALGALE--- 233

Query: 457 GQKHAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNF 516
                  DF K F          P    + Y +G +     +YE+A R + K + LNP  
Sbjct: 234 -------DFLKKF----------PANEAALYHKGILLSELSRYEDAERTISKVLKLNPGH 276

Query: 517 HVARAQRHFVWTSTL 531
             A  ++ F     L
Sbjct: 277 REAWFRKGFALVQLL 291



 Score = 43.5 bits (101), Expect = 0.32,   Method: Compositional matrix adjust.
 Identities = 88/421 (20%), Positives = 166/421 (39%), Gaps = 80/421 (19%)

Query: 143  AVVHLHAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQ--YEEALRNLDKTIAL 200
            A + L       +AF    E  +V P+   ++Y +G +  LF Q  Y+EAL   ++ +  
Sbjct: 1374 AGIALMGLGKQEEAFEVFSEILEVYPDFKKAWYGKGLV--LFSQERYDEALEAFEQALME 1431

Query: 201  NPNFHVARAQRHFVVHKMIVPGDRERVEQSLKEFRNFVDTHSNVVEACTLFAQVLVDQED 260
            +P + VA+                  +E+S  E     D    + +A T      +    
Sbjct: 1432 SP-YEVAK------------------IEESEIEKSKISDPE--LEDAWTKIGLAQLKTRR 1470

Query: 261  FDGAEEYFNRSIRVDPENASLYVHRAMLMLQARGNVDEAIKLIEKAISIDKSCMFAYETL 320
            ++ A + F + +  +P +A ++    ++M     N +EA+++ EKA+ ++ +   A E  
Sbjct: 1471 YEDAFDTFEKILEKNPTDADVWYLSGLVMRGLDQN-EEAVEVFEKALELNPALTAALEQK 1529

Query: 321  GTIEVQRGRLEEAVKCFNKALPLARDEAELSHIYSLRDAAIAQMKVCERYNIKKKV---- 376
            G   +   R EEA   F  AL L  +  ++  +YS    A+A  K+ +     K +    
Sbjct: 1530 GLGLLALCRYEEARDAFGSALALNPENVDI--LYS---RAVASYKLLDFEEASKDLERLL 1584

Query: 377  --SPRSQNITKN-EKLAIKQLRENN--------DIIIR--PADKGG----KTVVMDKADY 419
              +P   + TK    L I  +   +        D+++   PA +        V+ +  +Y
Sbjct: 1585 LFAPGFPDYTKACYMLGIASIELQDYERALQALDLVLEREPAHRDALYNMALVLFNLEEY 1644

Query: 420  TQKMTSILNSNDYEIIPGDP-------------------TKTIEESEKYGNLENESGQKH 460
             +   +       E  P DP                    K  E++  + N +NE    +
Sbjct: 1645 EEAARTF--EQLLEASPEDPESLNYLGLCLLELEDLKEALKAFEKAALF-NPKNEEALYN 1701

Query: 461  AASDFTK------AFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNP 514
            AA+   K      +    D   ++ P   D+   +G  +C+  QY EAL++ D  +  +P
Sbjct: 1702 AATTLIKLNRIQESLGYFDRILEISPENYDAMNYKGVAFCMLEQYREALKSFDNVLKKDP 1761

Query: 515  N 515
            N
Sbjct: 1762 N 1762



 Score = 41.6 bits (96), Expect = 0.97,   Method: Compositional matrix adjust.
 Identities = 59/275 (21%), Positives = 120/275 (43%), Gaps = 19/275 (6%)

Query: 71   AFEHEDYLTAIRHCTEEIESTSSNHTKALARLLRATVYIFTSQSTKAIEDLTQLVEDTSV 130
            + E +DY  A++     +E   + H  AL  +  A V     +  +A     QL+E +  
Sbjct: 1604 SIELQDYERALQALDLVLEREPA-HRDALYNM--ALVLFNLEEYEEAARTFEQLLEASPE 1660

Query: 131  DPKIKVNAHIKRAVVHLHAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEA 190
            DP+  +N ++   ++ L    +  KAF   ++A   +P   ++ Y          + +E+
Sbjct: 1661 DPE-SLN-YLGLCLLELEDLKEALKAF---EKAALFNPKNEEALYNAATTLIKLNRIQES 1715

Query: 191  LRNLDKTIALNPNFHVARAQRHFVVHKMIVPGDRERVEQSLKEFRNFVDTHSNVVEACTL 250
            L   D+ + ++P  + A      + +K +     E+  ++LK F N +    N ++A   
Sbjct: 1716 LGYFDRILEISPENYDA------MNYKGVAFCMLEQYREALKSFDNVLKKDPNNIKAVYN 1769

Query: 251  FAQVLVDQEDFDGAEEYFNRSIRVDP--ENASLYVHRAMLMLQARGNVDEAIKLIEKAIS 308
               V   Q+ ++ A   F  ++ ++P  E +  Y+    L L   G+ ++A+K  EK + 
Sbjct: 1770 VGVVCFKQKLYETAARAFKEALTINPWHEPSLRYLG---LSLAKTGDYEDALKAFEKLLR 1826

Query: 309  IDKSCMFAYETLGTIEVQRGRLEEAVKCFNKALPL 343
            I      A    G +  +  +  EA+K F++ L +
Sbjct: 1827 IKPQDPQAMNYRGVLLGKLEKYGEAIKAFDEVLSI 1861



 Score = 41.6 bits (96), Expect = 1.0,   Method: Compositional matrix adjust.
 Identities = 36/161 (22%), Positives = 73/161 (45%), Gaps = 11/161 (6%)

Query: 165  KVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQRHFVVHKMIVPGDR 224
            ++ P   D+   +G  +C+  QY EAL++ D  +  +PN   A      V +  +V   +
Sbjct: 1724 EISPENYDAMNYKGVAFCMLEQYREALKSFDNVLKKDPNNIKA------VYNVGVVCFKQ 1777

Query: 225  ERVEQSLKEFRNFVDTHSNVVEACTLFAQVLVDQEDFDGAEEYFNRSIRVDPENASLYVH 284
            +  E + + F+  +  +     +       L    D++ A + F + +R+ P++     +
Sbjct: 1778 KLYETAARAFKEALTINPWHEPSLRYLGLSLAKTGDYEDALKAFEKLLRIKPQDPQAMNY 1837

Query: 285  RAMLM--LQARGNVDEAIKLIEKAISIDKSCMFAYETLGTI 323
            R +L+  L+  G   EAIK  ++ +SI  +   A E L  +
Sbjct: 1838 RGVLLGKLEKYG---EAIKAFDEVLSIYPNMAGAKEKLEVL 1875



 Score = 41.6 bits (96), Expect = 1.2,   Method: Compositional matrix adjust.
 Identities = 53/251 (21%), Positives = 105/251 (41%), Gaps = 9/251 (3%)

Query: 94   NHTKALARLLRATVYIFTSQSTKAIEDLTQLVEDTSVDPKIKVNAHIKRAVVHLHAASDF 153
            N T A    L   V     Q+ +A+E   + +E   ++P +   A +++  + L A   +
Sbjct: 1485 NPTDADVWYLSGLVMRGLDQNEEAVEVFEKALE---LNPAL--TAALEQKGLGLLALCRY 1539

Query: 154  TKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQRHF 213
             +A      A  ++P   D  Y R         +EEA ++L++ +   P F       + 
Sbjct: 1540 EEARDAFGSALALNPENVDILYSRAVASYKLLDFEEASKDLERLLLFAPGFPDYTKACYM 1599

Query: 214  VVHKMIVPGDRERVEQSLKEFRNFVDTHSNVVEACTLFAQVLVDQEDFDGAEEYFNRSIR 273
            +    I   D ER  Q+L         H + +    L   VL + E+++ A   F + + 
Sbjct: 1600 LGIASIELQDYERALQALDLVLEREPAHRDALYNMAL---VLFNLEEYEEAARTFEQLLE 1656

Query: 274  VDPENASLYVHRAMLMLQARGNVDEAIKLIEKAISIDKSCMFAYETLGTIEVQRGRLEEA 333
              PE+     +  + +L+   ++ EA+K  EKA   +     A     T  ++  R++E+
Sbjct: 1657 ASPEDPESLNYLGLCLLELE-DLKEALKAFEKAALFNPKNEEALYNAATTLIKLNRIQES 1715

Query: 334  VKCFNKALPLA 344
            +  F++ L ++
Sbjct: 1716 LGYFDRILEIS 1726


>gi|384209475|ref|YP_005595195.1| hypothetical protein Bint_1999 [Brachyspira intermedia PWS/A]
 gi|343387125|gb|AEM22615.1| TPR domain-containing protein [Brachyspira intermedia PWS/A]
          Length = 664

 Score = 72.0 bits (175), Expect = 8e-10,   Method: Compositional matrix adjust.
 Identities = 96/409 (23%), Positives = 180/409 (44%), Gaps = 69/409 (16%)

Query: 116 KAIEDLTQLVEDTSVDPKIKVNAHIKRAVVHLHAASDFTKAFADLDEAEKVDPNVADSYY 175
           +AIED T  ++    +  I    + +RA+V+ +    F  A  D  +A +++    DSYY
Sbjct: 196 EAIEDFTIAIDYCPDESYI----YYERALVYSNLNM-FKNAIDDYTKAIELNEMDVDSYY 250

Query: 176 QRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQRHFVVHKMIVPGDRERVEQSLKEFR 235
            R   Y    +Y +A+ + +K + LNP+   A      V +K +   +    E+++++F 
Sbjct: 251 NRALTYFKLEEYNKAIEDYNKVLELNPDDTEA------VYNKGLCKQNLGLFEEAIEDFN 304

Query: 236 NFVDTHSNVVEACTLFAQVLVDQEDFDGAEEYFNRSIRVDPENASLYVHRAMLMLQARGN 295
           + +D+ +  V  C       ++ + ++ A +YF+  I+ +   A  Y +R         +
Sbjct: 305 SIIDSDNEFV--CYSLGICYLELKRYEEAIDYFDVFIKFNSCYADAYYYRGNAKFDLE-H 361

Query: 296 VDEAIKLIEKAISIDKSCMFAYETLGTIEVQRGRLEEAVKCFNKALPLARDEAELSHIYS 355
            +EAI+   K + +D   + AY      ++     +EA+K F++AL  A  +++ +++Y+
Sbjct: 362 YEEAIEDYNKTLELDNDHIDAYYERAMAKINLNLYDEAMKDFDEALYDAESDSDRAYLYT 421

Query: 356 LRDAAIAQMKVCERYNIKKKVSPRSQNITKNEKLAIKQLRENNDIIIRPADKGGKTVVMD 415
           L+ AA+ +                   I+KN   AI              D   K + + 
Sbjct: 422 LK-AALNE-------------------ISKNYDEAI--------------DNYTKAIELG 447

Query: 416 KADYTQKMTSILNS-------NDY-EIIPGDPTKTIEESEKYGNLENESGQKHAASD--- 464
              Y ++  +  N+       NDY + I  DP           N E  S + +A  D   
Sbjct: 448 DDCYCKRAIAKHNAGLIKESINDYNKAIDLDP----------DNYEIYSYKGNAELDLYL 497

Query: 465 FTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALN 513
           + +A  D D+A +++PN  ++YY RG        Y+EA R+   TI LN
Sbjct: 498 YEEAIRDFDKAIELNPNYDEAYYNRGIANEALKNYDEAFRDYQTTIKLN 546



 Score = 51.2 bits (121), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 65/283 (22%), Positives = 127/283 (44%), Gaps = 21/283 (7%)

Query: 94  NHTKALARLLRATVYIFTSQSTKAIEDLTQLVEDTSVDPKIKVNAHIKRAVVHLHAASDF 153
           N   A A   R           +AIED  + +E   +D    ++A+ +RA+  ++    +
Sbjct: 342 NSCYADAYYYRGNAKFDLEHYEEAIEDYNKTLE---LDND-HIDAYYERAMAKINLNL-Y 396

Query: 154 TKAFADLDEA---EKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQ 210
            +A  D DEA    + D + A  Y  +  +  +   Y+EA+ N  K I L  + +  RA 
Sbjct: 397 DEAMKDFDEALYDAESDSDRAYLYTLKAALNEISKNYDEAIDNYTKAIELGDDCYCKRA- 455

Query: 211 RHFVVHKMIVPGDRERVEQSLKEFRNFVDTHSNVVEACTLFAQVLVDQEDFDGAEEYFNR 270
                   I   +   +++S+ ++   +D   +  E  +      +D   ++ A   F++
Sbjct: 456 --------IAKHNAGLIKESINDYNKAIDLDPDNYEIYSYKGNAELDLYLYEEAIRDFDK 507

Query: 271 SIRVDPENASLYVHRAMLMLQARGNVDEAIKLIEKAISIDKSCMFAYETLGTIEVQRGRL 330
           +I ++P     Y +R +   +A  N DEA +  +  I ++K   +A+  LG   V+    
Sbjct: 508 AIELNPNYDEAYYNRGIAN-EALKNYDEAFRDYQTTIKLNKEHDYAFNNLGGCYVRLKEY 566

Query: 331 EEAVKCFNKALPLARDEAELSHIYSLRDAAIAQMKVCERYNIK 373
           +EA++ F KAL +    +ELS  Y+      +++ + E+ NI+
Sbjct: 567 DEALENFYKALEI---NSELSLPYNNIGEVKSRLALKEKNNIE 606



 Score = 50.8 bits (120), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 50/235 (21%), Positives = 107/235 (45%), Gaps = 18/235 (7%)

Query: 77  YLTAIRHCTEEIESTSSNHTKALARLLRATVYIFTSQSTKAIEDLTQLVEDTSVDPKIKV 136
           Y  A++   E +    S+  +A    L+A +   +    +AI++ T+ +E       +  
Sbjct: 396 YDEAMKDFDEALYDAESDSDRAYLYTLKAALNEISKNYDEAIDNYTKAIE-------LGD 448

Query: 137 NAHIKRAVVHLHAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDK 196
           + + KRA+   H A    ++  D ++A  +DP+  + Y  +G        YEEA+R+ DK
Sbjct: 449 DCYCKRAIAK-HNAGLIKESINDYNKAIDLDPDNYEIYSYKGNAELDLYLYEEAIRDFDK 507

Query: 197 TIALNPNFHVARAQRHFVVHKMIVPGDRERVEQSLKEFRNFVDTHSNVVEACTLFAQVLV 256
            I LNPN+  A   R      +      +  +++ ++++  +  +     A        V
Sbjct: 508 AIELNPNYDEAYYNRGIANEAL------KNYDEAFRDYQTTIKLNKEHDYAFNNLGGCYV 561

Query: 257 DQEDFDGAEEYFNRSIRVDPENASLYVH----RAMLMLQARGNVDEAIKLIEKAI 307
             +++D A E F +++ ++ E +  Y +    ++ L L+ + N++   KL  +A+
Sbjct: 562 RLKEYDEALENFYKALEINSELSLPYNNIGEVKSRLALKEKNNIENYNKLNGEAL 616


>gi|196006525|ref|XP_002113129.1| hypothetical protein TRIADDRAFT_56981 [Trichoplax adhaerens]
 gi|190585170|gb|EDV25239.1| hypothetical protein TRIADDRAFT_56981 [Trichoplax adhaerens]
          Length = 1643

 Score = 71.6 bits (174), Expect = 9e-10,   Method: Compositional matrix adjust.
 Identities = 84/383 (21%), Positives = 171/383 (44%), Gaps = 42/383 (10%)

Query: 168  PNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQRHFVVHKMI--VPGDRE 225
            P++A+ Y + GQ+Y   G+Y++AL   +K++ +  + H        + +  I  V  D+ 
Sbjct: 939  PSIANIYDKIGQVYNKQGKYDDALSVYNKSLKIKLSRHGDNHPSVAITYSSIGQVYNDQG 998

Query: 226  RVEQSLKEF--------RNFVDTHSNVVEACTLFAQVLVDQEDFDGAEEYFNRSIRVD-- 275
            + +++L  F        +   D H ++        +V   Q  +D A   +N+S+++   
Sbjct: 999  KYDEALSMFNKSLKITIKQLGDNHPSIANTYNKIGKVYNRQGKYDDALSVYNKSLKITLT 1058

Query: 276  ------PENASLYVHRAMLMLQARGNVDEAIKLIEKAISID--------KSCMFAYETLG 321
                  P  A+ Y     +    +   D+A+ +  K++ ID         S    Y+ +G
Sbjct: 1059 RLGDNHPNIANTYRDIGQVY-NDQCKYDDALSVYNKSLKIDLTKFDDNHPSIANTYDKIG 1117

Query: 322  TIEVQRGRLEEAVKCFNKALPLARDEAELSHIYSLRDAAIAQMKVCERYNIKKKVSPRSQ 381
             +  ++G+ ++A+  +NK+L +       +H       AI    + + YN + K +    
Sbjct: 1118 QVYNKQGKYDDALSVYNKSLKIKLSRHGDNH----PSIAITYSNIGQIYNDQGKYNEALS 1173

Query: 382  NITKNEKLAIKQLRENNDIIIRPADKGGKTVVMDKADYTQKMTSILNSNDYEIIP--GDP 439
               K+ K+ IKQL +N+  I    +K GK  V ++        S+ N +    +   GD 
Sbjct: 1174 VFNKSLKITIKQLGDNHPSIANTYNKIGK--VYNRQGKYDDALSVYNKSLKITLTRFGDN 1231

Query: 440  TKTIEESEKYGNL----ENESGQKHAASDFTKAFA-DLDEAEKVDPNVADSYYQRGQIYC 494
               I  +  YGN+     ++     A S + K+   DL + +   P++A++Y + GQ+Y 
Sbjct: 1232 HPNIANT--YGNIGQVYNDQCKYDDALSVYNKSLKIDLTKFDDNHPSIANTYDKIGQVYN 1289

Query: 495  LFGQYEEALRNLDKTIALNPNFH 517
              G+Y++AL   +K++ +  + H
Sbjct: 1290 KQGKYDDALSVYNKSLKIKLSRH 1312



 Score = 68.2 bits (165), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 89/377 (23%), Positives = 163/377 (43%), Gaps = 40/377 (10%)

Query: 168  PNVADSYYQRGQIYCLFGQYEEALRNLDKTIALN----PNFHVARAQRHFVVHKMIVPGD 223
            P++A +Y   GQIY   G+Y EAL   +K++ +      + H + A  +  + K+     
Sbjct: 1149 PSIAITYSNIGQIYNDQGKYNEALSVFNKSLKITIKQLGDNHPSIANTYNKIGKVYNRQG 1208

Query: 224  R-----ERVEQSLK-EFRNFVDTHSNVVEACTLFAQVLVDQEDFDGAEEYFNRSIRVD-- 275
            +         +SLK     F D H N+        QV  DQ  +D A   +N+S+++D  
Sbjct: 1209 KYDDALSVYNKSLKITLTRFGDNHPNIANTYGNIGQVYNDQCKYDDALSVYNKSLKIDLT 1268

Query: 276  ------PENASLYVHRAMLMLQARGNVDEAIKLIEKAISID--------KSCMFAYETLG 321
                  P  A+ Y  +   +   +G  D+A+ +  K++ I          S    Y  +G
Sbjct: 1269 KFDDNHPSIANTY-DKIGQVYNKQGKYDDALSVYNKSLKIKLSRHGDNHPSIAITYRNIG 1327

Query: 322  TIEVQRGRLEEAVKCFNKALPLARDEAELSHIYSLRDAAIAQM--KVCERYNIKKKVSPR 379
             I   +G+  EA+  FNK+L +   +   +H       +IA    K+ + YN + K    
Sbjct: 1328 QIYNDQGKYNEALSVFNKSLKITIKQLGDNH------PSIANTYNKIGKVYNHQGKYDDA 1381

Query: 380  SQNITKNEKLAIKQLRENNDIIIRPADKGGKTVVMDKADYTQKMTSILNSNDYEIIP-GD 438
                 K+ K+ + +L +N+ II       G+ V  ++  Y   ++  + S    +   GD
Sbjct: 1382 LSIHNKSLKITLTRLGDNHLIIANTYRDIGQ-VYNNQGKYDDALSVFIKSLKITLTKLGD 1440

Query: 439  PTKTIEES-EKYGNLENESGQ-KHAASDFTKAFA-DLDEAEKVDPNVADSYYQRGQIYCL 495
               +I  + +  G + N   +   A S + K+    L       P++A +Y   GQ+Y  
Sbjct: 1441 NHPSIANTYDNIGQVYNRQDEYDDALSVYYKSLKIKLTRLGDNHPSIAKTYNNIGQVYND 1500

Query: 496  FGQYEEALRNLDKTIAL 512
             G+++EAL  L+K++ +
Sbjct: 1501 QGKFDEALSMLNKSLKI 1517



 Score = 66.2 bits (160), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 84/392 (21%), Positives = 170/392 (43%), Gaps = 49/392 (12%)

Query: 149  AASDFTKAFA-DLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVA 207
            A S + K+   DL + +   P++A++Y + GQ+Y   G+Y++AL   +K++ +  + H  
Sbjct: 1087 ALSVYNKSLKIDLTKFDDNHPSIANTYDKIGQVYNKQGKYDDALSVYNKSLKIKLSRHGD 1146

Query: 208  RAQRHFVVHKMI--VPGDRERVEQSLKEF--------RNFVDTHSNVVEACTLFAQVLVD 257
                  + +  I  +  D+ +  ++L  F        +   D H ++        +V   
Sbjct: 1147 NHPSIAITYSNIGQIYNDQGKYNEALSVFNKSLKITIKQLGDNHPSIANTYNKIGKVYNR 1206

Query: 258  QEDFDGAEEYFNRSIRVD--------PENASLYVHRAMLMLQARGNVDEAIKLIEKAISI 309
            Q  +D A   +N+S+++         P  A+ Y +   +    +   D+A+ +  K++ I
Sbjct: 1207 QGKYDDALSVYNKSLKITLTRFGDNHPNIANTYGNIGQVY-NDQCKYDDALSVYNKSLKI 1265

Query: 310  D--------KSCMFAYETLGTIEVQRGRLEEAVKCFNKALPLARDEAELSHIYSLRDAAI 361
            D         S    Y+ +G +  ++G+ ++A+  +NK+L +       +H       AI
Sbjct: 1266 DLTKFDDNHPSIANTYDKIGQVYNKQGKYDDALSVYNKSLKIKLSRHGDNH----PSIAI 1321

Query: 362  AQMKVCERYNIKKKVSPRSQNITKNEKLAIKQLRENNDIIIRPADKGGKTVVMDKADYTQ 421
                + + YN + K +       K+ K+ IKQL +N+  I    +K GK V   +  Y  
Sbjct: 1322 TYRNIGQIYNDQGKYNEALSVFNKSLKITIKQLGDNHPSIANTYNKIGK-VYNHQGKYDD 1380

Query: 422  KMT--------SILNSNDYEIIPGDPTKTIEESEKYGNLENESGQ-KHAASDFTKAFA-D 471
             ++        ++    D  +I  +  + I      G + N  G+   A S F K+    
Sbjct: 1381 ALSIHNKSLKITLTRLGDNHLIIANTYRDI------GQVYNNQGKYDDALSVFIKSLKIT 1434

Query: 472  LDEAEKVDPNVADSYYQRGQIYCLFGQYEEAL 503
            L +     P++A++Y   GQ+Y    +Y++AL
Sbjct: 1435 LTKLGDNHPSIANTYDNIGQVYNRQDEYDDAL 1466



 Score = 63.2 bits (152), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 105/461 (22%), Positives = 192/461 (41%), Gaps = 80/461 (17%)

Query: 94  NHTKALARLLRATVYIFTSQS---------TKAIE-DLTQLVEDTSVDPKIKVN-AHI-K 141
           NH + +AR+ R    ++T Q          +K+I+ DLT+L ++  +  K      H+ K
Sbjct: 559 NHPR-IARIYRHIGKVYTDQGKYDDAISMISKSIKIDLTKLGDNHPIIAKTYGELGHVYK 617

Query: 142 RAVVHLHAASDFTKAFA-DLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIAL 200
               +  A S + K+    L +A K   +++ +Y   GQ+Y   G+ +EAL  L+K++ L
Sbjct: 618 NQGKYDDALSVYYKSLKIKLSQAGKNYLSISLTYDGIGQVYHCQGKCDEALSMLNKSLKL 677

Query: 201 NPNFHVARAQRHFVVHKMIVPGDRERVEQSLKEFRNFVDTHSNVVEACTLFAQVLVDQED 260
           N                                   F + H N+V      A++   Q  
Sbjct: 678 N--------------------------------LTRFANNHPNIVSLHNKIARIYNQQAK 705

Query: 261 FDGAEEYFNRSIRVD--------PENASLYVHRAMLMLQARGNVDEAIKLIEKAISI--- 309
           +D A   FN+S++          P  A++Y     +    +G  D+A+ +  K++ I   
Sbjct: 706 YDDALTIFNKSLKFTLTRLGDNHPRTAAIYKDIGQVY-NNQGKYDDALSVYNKSLKIILT 764

Query: 310 -----DKSCMFAYETLGTIEVQRGRLEEAVKCFNKAL--PLARDEAELSHIYSLRDAAIA 362
                  S    Y+ +G +  ++G+ ++A+  +NK+L   L R    L  I      AI 
Sbjct: 765 KFDDNHPSIASTYDIIGRVYNKQGKYDDALSVYNKSLKIKLTRLGDNLPSI------AIT 818

Query: 363 QMKVCERYNIKKKVSPRSQNITKNEKLAIKQLRENNDIIIRPADKGGKTVVMDKADYTQK 422
              + + YN + K         K+ K+ +KQL +N+  I    +  GK V   +  Y   
Sbjct: 819 YSSIGQVYNDQGKYDEALSMFNKSLKITLKQLGDNHPSITNTYNNIGK-VYNRQGKYDDA 877

Query: 423 MTSILNSNDYEIIP-GDPTKTIEESEKYGNL----ENESGQKHAASDFTKAFA-DLDEAE 476
           ++    S    +   GD    I  +  YGN+     ++     A S F K+    L +  
Sbjct: 878 LSMYNKSLKITLTRFGDNHPNIANT--YGNIGQVYNDQCKYDDALSVFNKSLKITLTKLG 935

Query: 477 KVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFH 517
              P++A+ Y + GQ+Y   G+Y++AL   +K++ +  + H
Sbjct: 936 DNHPSIANIYDKIGQVYNKQGKYDDALSVYNKSLKIKLSRH 976



 Score = 62.8 bits (151), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 83/365 (22%), Positives = 157/365 (43%), Gaps = 48/365 (13%)

Query: 168  PNVADSYYQRGQIYCLFGQYEEALRNLDKTIALN----PNFHVARAQRHFVVHKMIVPGD 223
            P++A +Y   GQ+Y   G+Y+EAL   +K++ +      + H +    +  + K+     
Sbjct: 813  PSIAITYSSIGQVYNDQGKYDEALSMFNKSLKITLKQLGDNHPSITNTYNNIGKVYNRQG 872

Query: 224  R-----ERVEQSLK-EFRNFVDTHSNVVEACTLFAQVLVDQEDFDGAEEYFNRSIRVDPE 277
            +         +SLK     F D H N+        QV  DQ  +D A   FN+S+++   
Sbjct: 873  KYDDALSMYNKSLKITLTRFGDNHPNIANTYGNIGQVYNDQCKYDDALSVFNKSLKI--- 929

Query: 278  NASLYVHRAMLMLQARGNVDEAIKLIEKAISIDKSCMFAYETLGTIEVQRGRLEEAVKCF 337
                        L   G+   +I  I             Y+ +G +  ++G+ ++A+  +
Sbjct: 930  -----------TLTKLGDNHPSIANI-------------YDKIGQVYNKQGKYDDALSVY 965

Query: 338  NKALPLARDEAELSHIYSLRDAAIAQMKVCERYNIKKKVSPRSQNITKNEKLAIKQLREN 397
            NK+L +       +H       AI    + + YN + K         K+ K+ IKQL +N
Sbjct: 966  NKSLKIKLSRHGDNH----PSVAITYSSIGQVYNDQGKYDEALSMFNKSLKITIKQLGDN 1021

Query: 398  NDIIIRPADKGGKTVVMDKADYTQKMTSILNSNDYEIIP--GDPTKTIEESEK-YGNLEN 454
            +  I    +K GK  V ++        S+ N +    +   GD    I  + +  G + N
Sbjct: 1022 HPSIANTYNKIGK--VYNRQGKYDDALSVYNKSLKITLTRLGDNHPNIANTYRDIGQVYN 1079

Query: 455  ESGQ-KHAASDFTKAFA-DLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIAL 512
            +  +   A S + K+   DL + +   P++A++Y + GQ+Y   G+Y++AL   +K++ +
Sbjct: 1080 DQCKYDDALSVYNKSLKIDLTKFDDNHPSIANTYDKIGQVYNKQGKYDDALSVYNKSLKI 1139

Query: 513  NPNFH 517
              + H
Sbjct: 1140 KLSRH 1144



 Score = 45.1 bits (105), Expect = 0.10,   Method: Compositional matrix adjust.
 Identities = 79/370 (21%), Positives = 150/370 (40%), Gaps = 64/370 (17%)

Query: 168 PNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQRHFVVHKMIVPGDRERV 227
           P++A +Y   G++Y   G+Y+EAL  L+K++ +                         RV
Sbjct: 349 PSIAITYNNIGKVYSDQGKYDEALSMLNKSLKI-------------------------RV 383

Query: 228 EQSLKEFRNFVDTHSNVVEACTLFAQVLVDQEDFDGAEEYFNRSIRVD--------PENA 279
            Q         D H ++ +     A+V   Q  +D A   +N+S+++         P  A
Sbjct: 384 IQ-------LGDNHPSITDTYNNIARVYNSQGKYDNALSTYNKSLKIQQAQLGDNHPSTA 436

Query: 280 SLYVHRAMLMLQARGNVDEAIKLIEKAISIDKSCMF--------AYETLGTIEVQRGRLE 331
             Y     + +   G  D+A+ + +K++ I+ + +          Y  +G +   +G  +
Sbjct: 437 ITYNGIGHVYVNL-GKHDDALLVYKKSLKIELAQLGENHPNTAETYNNIGQMNTYQGNYD 495

Query: 332 EAVKCFNKALPLARDEAELSHIYSLRDAAIAQMKVCERYNIKKKVSPRSQNITKNEKLAI 391
            A+   NK+L +       +H+            +   Y  + K         K+ K+ +
Sbjct: 496 NALLMLNKSLKIHLTRYGDNHL----GITNTYHNIASVYRRQGKYDDAQSICNKSLKMIL 551

Query: 392 KQLRENND--IIIRPADKGGKTVVMDKADYTQKMTSILNSNDYEIIP-GDPTKTIEESEK 448
            +  +N +   I R     GK V  D+  Y   ++ I  S   ++   GD    I ++  
Sbjct: 552 TKFGDNCNHPRIARIYRHIGK-VYTDQGKYDDAISMISKSIKIDLTKLGDNHPIIAKT-- 608

Query: 449 YGNL----ENESGQKHAASDFTKAFA-DLDEAEKVDPNVADSYYQRGQIYCLFGQYEEAL 503
           YG L    +N+     A S + K+    L +A K   +++ +Y   GQ+Y   G+ +EAL
Sbjct: 609 YGELGHVYKNQGKYDDALSVYYKSLKIKLSQAGKNYLSISLTYDGIGQVYHCQGKCDEAL 668

Query: 504 RNLDKTIALN 513
             L+K++ LN
Sbjct: 669 SMLNKSLKLN 678



 Score = 42.7 bits (99), Expect = 0.48,   Method: Compositional matrix adjust.
 Identities = 49/222 (22%), Positives = 93/222 (41%), Gaps = 28/222 (12%)

Query: 149 AASDFTKAF-ADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALN----PN 203
           A S F K+    L + ++  P++A +Y   GQ+Y   G+Y +AL  L+K++ +      N
Sbjct: 161 ALSVFNKSLKTQLTQLDENHPSIAITYSNIGQVYNDQGKYNKALSMLNKSLKITLTKLSN 220

Query: 204 FHVARAQRHFVV-----HKMIVPGDRERVEQSLK-EFRNFVDTHSNVVEACTLFAQVLVD 257
            H + A  +  +     H+           +SLK       D H  +        QV  +
Sbjct: 221 NHPSIANTYNNIGQVYNHQGKYDDALSIHNKSLKITLTRLGDNHLIIANTYRDIGQVYNN 280

Query: 258 QEDFDGAEEYFNRSIRVD--------PENASLYVHRAMLMLQARGNVDEAIKLIEKAISI 309
           Q  +D A   +N+S+++         P  A+ Y +   +    +   D+A+ +  K++ I
Sbjct: 281 QGKYDDALSVYNKSLKITLTKLEDNHPSIANTYDNIGQVY-NNQDKYDDALSVYYKSLKI 339

Query: 310 D--------KSCMFAYETLGTIEVQRGRLEEAVKCFNKALPL 343
                     S    Y  +G +   +G+ +EA+   NK+L +
Sbjct: 340 KLTRLGDNHPSIAITYNNIGKVYSDQGKYDEALSMLNKSLKI 381



 Score = 39.7 bits (91), Expect = 3.8,   Method: Compositional matrix adjust.
 Identities = 55/287 (19%), Positives = 125/287 (43%), Gaps = 36/287 (12%)

Query: 251 FAQVLVDQEDFDGAEEYFNRSIR-----VDPENASLYVHRAML--MLQARGNVDEAIKLI 303
              V  DQ+ FD A   FN+S++     +D  + S+ +  + +  +   +G  ++A+ ++
Sbjct: 148 IGNVYDDQDKFDDALSVFNKSLKTQLTQLDENHPSIAITYSNIGQVYNDQGKYNKALSML 207

Query: 304 EKAISID--------KSCMFAYETLGTIEVQRGRLEEAVKCFNKALPLARDEAELSHIYS 355
            K++ I          S    Y  +G +   +G+ ++A+   NK+L +       +H+  
Sbjct: 208 NKSLKITLTKLSNNHPSIANTYNNIGQVYNHQGKYDDALSIHNKSLKITLTRLGDNHLI- 266

Query: 356 LRDAAIAQMKVCERYNIKKKVSPRSQNITKNEKLAIKQLRENNDIIIRPADKGGKTVVMD 415
               A     + + YN + K         K+ K+ + +L +N+  I    D  G+ V  +
Sbjct: 267 ---IANTYRDIGQVYNNQGKYDDALSVYNKSLKITLTKLEDNHPSIANTYDNIGQ-VYNN 322

Query: 416 KADYTQKMTSILNSNDYEIIP-GDPTKTIEES-EKYGNLENESGQKHAASDFTKAFADLD 473
           +  Y   ++    S   ++   GD   +I  +    G + ++ G+      + +A + L+
Sbjct: 323 QDKYDDALSVYYKSLKIKLTRLGDNHPSIAITYNNIGKVYSDQGK------YDEALSMLN 376

Query: 474 EAEKV--------DPNVADSYYQRGQIYCLFGQYEEALRNLDKTIAL 512
           ++ K+         P++ D+Y    ++Y   G+Y+ AL   +K++ +
Sbjct: 377 KSLKIRVIQLGDNHPSITDTYNNIARVYNSQGKYDNALSTYNKSLKI 423


>gi|149235632|ref|XP_001523694.1| hypothetical protein LELG_05110 [Lodderomyces elongisporus NRRL
           YB-4239]
 gi|146452673|gb|EDK46929.1| hypothetical protein LELG_05110 [Lodderomyces elongisporus NRRL
           YB-4239]
          Length = 617

 Score = 71.6 bits (174), Expect = 9e-10,   Method: Compositional matrix adjust.
 Identities = 88/361 (24%), Positives = 153/361 (42%), Gaps = 38/361 (10%)

Query: 22  PSKQFIKTYLKSFPNDPILQPDGLSNGVELTNGDTNESHE---LDLLSKAKR----AFEH 74
           PS   I ++  +F  DP L         E  N D +E  E    D L K K      +E 
Sbjct: 259 PSAATIGSFFGAFSEDPAL---------EYLN-DPSEGGEKFLYDALMKIKGNSRDGYEE 308

Query: 75  EDYLT--AIRHCTEEIESTSSNHTKALARLLRATVYIFTSQSTKAIEDLTQLVEDTSVDP 132
            D L   A+   T + +      + A+A    A      +  T A E +     D ++  
Sbjct: 309 ADTLVNQAVGALTNDEQDEKKKESLAIALEYNAAFQFLKNDPTTAAELI-----DKAIAL 363

Query: 133 KIKVNAHIKRAVVHLHAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALR 192
           K +  A++ RA+++   +S + +A  D   AE++DP+  D +Y  GQ+Y L      A  
Sbjct: 364 KPRPRAYVFRALINADRSS-YEEALKDFKLAEELDPSSPDIFYHLGQLYYLTSDLANAEV 422

Query: 193 NLDKTIALNPNFHVARAQRHFVVHKMIVPGDRERVEQSLKEFRNFVDTHSNVVEACTLFA 252
           N +K  AL+P+   A  Q   + +K        + E++ ++F           E    + 
Sbjct: 423 NFNKAKALHPDNVYAYIQLACITYK------NGQQEEAFEKFTEAKLKFPTSPEIPNYYG 476

Query: 253 QVLVDQEDFDGAEEYFNRSIRVDPENASLYVHRAMLMLQAR-------GNVDEAIKLIEK 305
           ++L D+ D  GA + F+ S R+  +     V    L+ QA          + EA +L++K
Sbjct: 477 EILADKGDIPGALKQFDISARLQEKLDRFSVGALPLINQATVISRESLEKLPEAEQLLQK 536

Query: 306 AISIDKSCMFAYETLGTIEVQRGRLEEAVKCFNKALPLARDEAELSHIYSLRDAAIAQMK 365
           A  +D     A  +L  I++Q+  +++A+  F ++  LAR   E     S  +A   Q +
Sbjct: 537 ACELDPKSELARISLAQIKLQKDEVDDAIVLFEESCDLARSIEEKIQAVSFAEATKMQKR 596

Query: 366 V 366
           +
Sbjct: 597 I 597


>gi|410671866|ref|YP_006924237.1| hypothetical protein Mpsy_2668 [Methanolobus psychrophilus R15]
 gi|409170994|gb|AFV24869.1| hypothetical protein Mpsy_2668 [Methanolobus psychrophilus R15]
          Length = 368

 Score = 71.6 bits (174), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 49/184 (26%), Positives = 93/184 (50%), Gaps = 7/184 (3%)

Query: 161 DEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQRHFVVHKMIV 220
           ++A +++P  A+++  +G      G+Y+EA++  D  I +NP    A   + +V++K   
Sbjct: 191 EKAIELNPEYANAWRGKGYELIELGRYDEAIQCYDNAIEINPEDAYAWVGKGYVLYKF-- 248

Query: 221 PGDRERVEQSLKEFRNFVDTHSNVVEACTLFAQVLVDQEDFDGAEEYFNRSIRVDPENAS 280
               +R ++++K F   ++ H     A      +L   E +D A E +++ I +DPE  S
Sbjct: 249 ----DRYDEAIKCFDKAIEIHPEDAYAWGNKGYMLGILERYDEAIECYDKVIEIDPEFTS 304

Query: 281 LYVHRAMLMLQARGNVDEAIKLIEKAISIDKSCMFAYETLGTIEVQRGRLEEAVKCFNKA 340
            +  +   + +  G  DEAI+  + AI I+     A+E  G    + GR +EA +C+ KA
Sbjct: 305 AWKEKGYALYKL-GRYDEAIQCYDNAIEINPEYADAWEGKGDALNELGRSDEANECYKKA 363

Query: 341 LPLA 344
             L+
Sbjct: 364 EKLS 367



 Score = 69.7 bits (169), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 52/219 (23%), Positives = 106/219 (48%), Gaps = 12/219 (5%)

Query: 130 VDPKIKVNAHIKRAVVHLHAASD-----FTKAFADLDEAEKVDPNVADSYYQRGQIYCLF 184
            DP+       K   ++L+ + +     F K+    D+    DP+  +++Y +G  +   
Sbjct: 121 ADPEFDEAWSGKGITLYLNGSYNESAEFFEKSIEYSDKKITSDPDSFEAWYNKGISFSYI 180

Query: 185 GQYEEALRNLDKTIALNPNFHVARAQRHFVVHKMIVPGDRERVEQSLKEFRNFVDTHSNV 244
           G+  E+L   +K I LNP +  A   + +   ++I  G   R +++++ + N ++ +   
Sbjct: 181 GRTNESLECYEKAIELNPEYANAWRGKGY---ELIELG---RYDEAIQCYDNAIEINPED 234

Query: 245 VEACTLFAQVLVDQEDFDGAEEYFNRSIRVDPENASLYVHRAMLMLQARGNVDEAIKLIE 304
             A      VL   + +D A + F+++I + PE+A  + ++   ML      DEAI+  +
Sbjct: 235 AYAWVGKGYVLYKFDRYDEAIKCFDKAIEIHPEDAYAWGNKGY-MLGILERYDEAIECYD 293

Query: 305 KAISIDKSCMFAYETLGTIEVQRGRLEEAVKCFNKALPL 343
           K I ID     A++  G    + GR +EA++C++ A+ +
Sbjct: 294 KVIEIDPEFTSAWKEKGYALYKLGRYDEAIQCYDNAIEI 332



 Score = 54.3 bits (129), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 50/232 (21%), Positives = 106/232 (45%), Gaps = 17/232 (7%)

Query: 125 VEDTSVDPKIKVNAHIKRAVVHLHAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLF 184
           V++  VD    ++A +      L+A S + +A    +E  ++DP  + ++  +G      
Sbjct: 47  VDNIQVDDPYYIDA-LNYKGESLYALSRYNEAIGCYNEVIEMDPENSKAWVNKGDSLLEI 105

Query: 185 GQYEEALRNLDKTIALNPNFHVARAQRHFVVHKMIVPGD--------RERVEQSLKEFRN 236
            +Y+EA     + I  +P F  A + +   ++   + G          + +E S K+  +
Sbjct: 106 YEYDEADACYGRAIEADPEFDEAWSGKGITLY---LNGSYNESAEFFEKSIEYSDKKITS 162

Query: 237 FVDTHSNVVEACTLFAQVLVDQEDFDGAEEYFNRSIRVDPENASLYVHRAMLMLQARGNV 296
             D+          F+ +    E      E + ++I ++PE A+ +  +   +++  G  
Sbjct: 163 DPDSFEAWYNKGISFSYIGRTNESL----ECYEKAIELNPEYANAWRGKGYELIEL-GRY 217

Query: 297 DEAIKLIEKAISIDKSCMFAYETLGTIEVQRGRLEEAVKCFNKALPLARDEA 348
           DEAI+  + AI I+    +A+   G +  +  R +EA+KCF+KA+ +  ++A
Sbjct: 218 DEAIQCYDNAIEINPEDAYAWVGKGYVLYKFDRYDEAIKCFDKAIEIHPEDA 269



 Score = 41.6 bits (96), Expect = 1.1,   Method: Compositional matrix adjust.
 Identities = 58/268 (21%), Positives = 105/268 (39%), Gaps = 31/268 (11%)

Query: 268 FNRSIRVDPENASLYVHRAMLMLQARGNVDEAIKLIEKAISIDKSCMFAYETLGTIEVQR 327
           +N  I +DPEN+  +V++   +L+     DEA     +AI  D     A+   G      
Sbjct: 81  YNEVIEMDPENSKAWVNKGDSLLEIY-EYDEADACYGRAIEADPEFDEAWSGKGITLYLN 139

Query: 328 GRLEEAVKCFNKALPLAR-------DEAELSHIYSLRDAAIAQM-KVCERYNIKKKVSPR 379
           G   E+ + F K++  +        D  E  +   +  + I +  +  E Y    +++P 
Sbjct: 140 GSYNESAEFFEKSIEYSDKKITSDPDSFEAWYNKGISFSYIGRTNESLECYEKAIELNPE 199

Query: 380 SQNITKNEKLAIKQLRE--------NNDIIIRPADKG---GKTVVMDKADYTQKMTSILN 428
             N  + +   + +L          +N I I P D     GK  V+ K D   +     +
Sbjct: 200 YANAWRGKGYELIELGRYDEAIQCYDNAIEINPEDAYAWVGKGYVLYKFDRYDEAIKCFD 259

Query: 429 SNDYEIIPGDPTKTIEESEKYGNLENESGQKHAASDFTKAFADLDEAEKVDPNVADSYYQ 488
               EI P D      +    G LE           + +A    D+  ++DP    ++ +
Sbjct: 260 KA-IEIHPEDAYAWGNKGYMLGILER----------YDEAIECYDKVIEIDPEFTSAWKE 308

Query: 489 RGQIYCLFGQYEEALRNLDKTIALNPNF 516
           +G      G+Y+EA++  D  I +NP +
Sbjct: 309 KGYALYKLGRYDEAIQCYDNAIEINPEY 336


>gi|189022474|ref|YP_001932215.1| RNA-binding region RNP-1 (RNA recognition motif) [Brucella abortus
           S19]
 gi|189021048|gb|ACD73769.1| RNA-binding region RNP-1 (RNA recognition motif) [Brucella abortus
           S19]
          Length = 283

 Score = 71.6 bits (174), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 55/183 (30%), Positives = 87/183 (47%), Gaps = 7/183 (3%)

Query: 167 DPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQRHFVVHKMIVPGDRER 226
           +P   + Y  RG  Y   G+Y+EA+R+ D+ IALNPNF+ A A R  V   M   GD  +
Sbjct: 64  NPRDPEGYNVRGSAYGKAGRYKEAMRDFDQAIALNPNFYQAYANRALVDRYM---GDNNK 120

Query: 227 VEQSLKEFRNFVDTHSNVVEACTLFAQVLVDQEDFDGAEEYFNRSIRVDPENASLYVHRA 286
              +++++   +  +     A      V       D A   FN++I +   +   Y +R 
Sbjct: 121 ---AVQDYSRAIQLNPQYDAAYIGRGNVYRQAGHLDQALNDFNQAIALRTTDGRAYHNRG 177

Query: 287 MLMLQARGNVDEAIKLIEKAISIDKSCMFAYETLGTIEVQRGRLEEAVKCFNKALPLARD 346
            L+ QA+G   +AI+   KAIS++ +    Y   G   V  G  + A   FN A+ L ++
Sbjct: 178 -LIYQAKGLHKQAIEDFSKAISLNSTAPEPYNGRGISYVALGDYDNAFDDFNTAITLDQN 236

Query: 347 EAE 349
            AE
Sbjct: 237 VAE 239



 Score = 48.9 bits (115), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 47/208 (22%), Positives = 92/208 (44%), Gaps = 12/208 (5%)

Query: 103 LRATVYIFTSQSTKAIEDLTQLVEDTSVDPKIKVNAHIKRAVVHLHAASDFTKAFADLDE 162
           +R + Y    +  +A+ D  Q +   +++P     A+  RA+V  +   D  KA  D   
Sbjct: 73  VRGSAYGKAGRYKEAMRDFDQAI---ALNPNF-YQAYANRALVDRYMG-DNNKAVQDYSR 127

Query: 163 AEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQRHFVVHKMIVPG 222
           A +++P    +Y  RG +Y   G  ++AL + ++ IAL      A   R  +     +  
Sbjct: 128 AIQLNPQYDAAYIGRGNVYRQAGHLDQALNDFNQAIALRTTDGRAYHNRGLIYQAKGLH- 186

Query: 223 DRERVEQSLKEFRNFVDTHSNVVEACTLFAQVLVDQEDFDGAEEYFNRSIRVDPENASLY 282
                +Q++++F   +  +S   E         V   D+D A + FN +I +D   A  +
Sbjct: 187 -----KQAIEDFSKAISLNSTAPEPYNGRGISYVALGDYDNAFDDFNTAITLDQNVAESW 241

Query: 283 VHRAMLMLQARGNVDEAIKLIEKAISID 310
            ++A L+ +  G+  +A     +A+ +D
Sbjct: 242 ANQA-LVYEHNGDKAKAANSYARAVQLD 268



 Score = 48.1 bits (113), Expect = 0.011,   Method: Compositional matrix adjust.
 Identities = 22/48 (45%), Positives = 30/48 (62%)

Query: 479 DPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQRHFV 526
           +P   + Y  RG  Y   G+Y+EA+R+ D+ IALNPNF+ A A R  V
Sbjct: 64  NPRDPEGYNVRGSAYGKAGRYKEAMRDFDQAIALNPNFYQAYANRALV 111



 Score = 38.5 bits (88), Expect = 8.7,   Method: Compositional matrix adjust.
 Identities = 26/105 (24%), Positives = 50/105 (47%), Gaps = 5/105 (4%)

Query: 104 RATVYIFTSQSTKAIEDLTQLVEDTSVDPKIKVNAHIKRAVVHLHAASDFTKAFADLDEA 163
           R  +Y       +AIED ++ +   S  P+     +  R + ++ A  D+  AF D + A
Sbjct: 176 RGLIYQAKGLHKQAIEDFSKAISLNSTAPE----PYNGRGISYV-ALGDYDNAFDDFNTA 230

Query: 164 EKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVAR 208
             +D NVA+S+  +  +Y   G   +A  +  + + L+P +  A+
Sbjct: 231 ITLDQNVAESWANQALVYEHNGDKAKAANSYARAVQLDPKYKPAK 275


>gi|337267869|ref|YP_004611924.1| hypothetical protein Mesop_3384 [Mesorhizobium opportunistum WSM2075]
 gi|336028179|gb|AEH87830.1| Tetratricopeptide TPR_2 repeat protein [Mesorhizobium opportunistum
            WSM2075]
          Length = 1372

 Score = 71.6 bits (174), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 102/476 (21%), Positives = 185/476 (38%), Gaps = 48/476 (10%)

Query: 99   LARLLRATVYIFTSQSTKAIEDLTQLVEDTSVDPKIKVNAHIKRAVVHLHAASDFTKAFA 158
            LA   RA  +       +AI+D  +++E   + P + V+A+++R +       D   A A
Sbjct: 832  LAYFGRANAWDDKRAYDRAIDDYDRVIE---LLPNM-VSAYVRRGMAKATT-EDAEGALA 886

Query: 159  DLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALN----PNFHVARAQR--- 211
            D   A   DP + D+Y+  G  + + G  + A+      I ++    P+++    +R   
Sbjct: 887  DCGRAAAFDPKLVDAYFCMGMAWHVNGDSQRAITAYSAAIEIDAKDAPSYYGRGIERADS 946

Query: 212  --------HFVVHKMIVPGDRERVEQSLKEFRNF---------VDTHSNVVEACTLFAQV 254
                     F     + PG+ +                     V +    ++A       
Sbjct: 947  KDYSGAIADFDQAIRLYPGNPDYAVARKAAVAALKKGGAAPLAVGSDPRNLQAFMDRGNA 1006

Query: 255  LVDQEDFDGAEEYFNRSIRVDPENASLYVHRAMLMLQARGNVDEAIKLIEKAISIDKSCM 314
               +  +D A   ++R+I +DP  AS YV R   ++ A+G  D AI    K I +  + +
Sbjct: 1007 FYGKRKYDRAIAEYSRAIALDPRKASAYVGRGTSLV-AKGKYDAAITDYGKVIELYPAYV 1065

Query: 315  FAYETLGTIEVQRGRLEEAVKCFNKALPLARDEAELSHIYSLR----------DAAIAQM 364
             AY        ++  L+ A+  +++ + L   + + + +Y  R          D AIA  
Sbjct: 1066 DAYIGRAVAWSKKNELDRAIADYSRVIEL---DPQYAPVYFGRGSVWFTKGEYDQAIADY 1122

Query: 365  KVCERYNIKKKVSPRSQNITKNEKLAIKQLRENNDIIIRPADKGGKTVVMDKADYTQKMT 424
                R + K  ++ + + I    K    ++     +   PA     +     A    K  
Sbjct: 1123 DQALRLDPKLALARKGRQIAMAAKANASKM-PGKAVGEAPAKPSSASPA---AQAFSKGW 1178

Query: 425  SILNSNDYEIIPGDPTKTIEESEKYGNLE-NESGQKHAASDFTKAFADLDEAEKVDPNVA 483
            ++   NDY+       K I     + +     +    A  D+  A AD  +A  ++PN+A
Sbjct: 1179 TLHEKNDYDGAIALYGKAIAFFPAFHDAYLARAMAWEAKRDYAHAVADYSQAIALNPNLA 1238

Query: 484  DSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQRHFVWTSTLAELMAFSD 539
            ++YY RGQ     G Y+ AL + DK I+LN       A R  +W     +  A  D
Sbjct: 1239 ETYYDRGQNLGFQGDYDGALADYDKAISLNTRDAKVYADRGLIWMGRHEDAAALRD 1294



 Score = 67.0 bits (162), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 71/301 (23%), Positives = 125/301 (41%), Gaps = 49/301 (16%)

Query: 82   RHCTEEIESTSSNHTKALARLLRATVYIFTSQSTKAIEDLTQLVEDTSVDPKIKVNAHIK 141
            R   E   + + +  KA A + R T  +   +   AI D  +++E   + P   V+A+I 
Sbjct: 1015 RAIAEYSRAIALDPRKASAYVGRGTSLVAKGKYDAAITDYGKVIE---LYPAY-VDAYIG 1070

Query: 142  RAVVHLHAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALN 201
            RAV      ++  +A AD     ++DP  A  Y+ RG ++   G+Y++A+ + D+ + L+
Sbjct: 1071 RAVA-WSKKNELDRAIADYSRVIELDPQYAPVYFGRGSVWFTKGEYDQAIADYDQALRLD 1129

Query: 202  PNFHVARAQRHFVV----HKMIVPGDRERVEQSLKEFRNFVDTHSNVVEACTLFAQVLVD 257
            P   +AR  R   +    +   +PG      +++ E      + S   +A +     L +
Sbjct: 1130 PKLALARKGRQIAMAAKANASKMPG------KAVGEAPAKPSSASPAAQAFSK-GWTLHE 1182

Query: 258  QEDFDGAEEYFNRSIRVDPENASLYVHRAMLM---------------------------- 289
            + D+DGA   + ++I   P     Y+ RAM                              
Sbjct: 1183 KNDYDGAIALYGKAIAFFPAFHDAYLARAMAWEAKRDYAHAVADYSQAIALNPNLAETYY 1242

Query: 290  -----LQARGNVDEAIKLIEKAISIDKSCMFAYETLGTIEVQRGRLEEAVKCFNKALPLA 344
                 L  +G+ D A+   +KAIS++      Y   G I + R     A++ F KAL L 
Sbjct: 1243 DRGQNLGFQGDYDGALADYDKAISLNTRDAKVYADRGLIWMGRHEDAAALRDFEKALGLD 1302

Query: 345  R 345
            R
Sbjct: 1303 R 1303



 Score = 61.6 bits (148), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 49/173 (28%), Positives = 86/173 (49%), Gaps = 8/173 (4%)

Query: 137  NAHIKRAVVHLHAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDK 196
            +A++ RA+    A  D+  A AD  +A  ++PN+A++YY RGQ     G Y+ AL + DK
Sbjct: 1205 DAYLARAMA-WEAKRDYAHAVADYSQAIALNPNLAETYYDRGQNLGFQGDYDGALADYDK 1263

Query: 197  TIALNPNFHVARAQRHFVVHKMIVPGDRERVEQSLKEFRNFVDTHSNVVEACTLFAQVLV 256
             I+LN      R  + +    +I  G R     +L++F   +        A      + +
Sbjct: 1264 AISLN-----TRDAKVYADRGLIWMG-RHEDAAALRDFEKALGLDRKNPFAYLGRGVIRI 1317

Query: 257  DQEDFDGAEEYFNRSIRVDPENASLYVHRAMLMLQARGNVDEAIKLIEKAISI 309
             + D+DGA    +++I++ P+ A+ Y  R+     A+GN   A    +KA+S+
Sbjct: 1318 SKADYDGAIADLSQTIKLKPDFATAYKVRSK-AWDAKGNHKRAEADRKKALSL 1369



 Score = 59.7 bits (143), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 79/369 (21%), Positives = 144/369 (39%), Gaps = 23/369 (6%)

Query: 164  EKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQRHFVVHKMIVPGD 223
            +  DP V  +  Q G      G+Y++A+    K IAL+P+  +A   R           D
Sbjct: 791  QATDPRVLAAVRQ-GDSLSDAGKYDQAISAYGKAIALDPDSPLAYFGRANAWD------D 843

Query: 224  RERVEQSLKEFRNFVDTHSNVVEACTLFAQVLVDQEDFDGAEEYFNRSIRVDPENASLYV 283
            +   ++++ ++   ++   N+V A           ED +GA     R+   DP+    Y 
Sbjct: 844  KRAYDRAIDDYDRVIELLPNMVSAYVRRGMAKATTEDAEGALADCGRAAAFDPKLVDAYF 903

Query: 284  HRAMLMLQARGNVDEAIKLIEKAISIDKSCMFAYETLGTIEVQRGRLEEAVKCFNKALPL 343
               M      G+   AI     AI ID     +Y   G           A+  F++A+ L
Sbjct: 904  CMGM-AWHVNGDSQRAITAYSAAIEIDAKDAPSYYGRGIERADSKDYSGAIADFDQAIRL 962

Query: 344  ARDEAELSHIYSLRDAAIAQMKVCERYNIKKKVSPRSQNITKNEKLAIKQLRENNDIIIR 403
                 + +       AA+ +        +     PR+     +   A    R+ +  I  
Sbjct: 963  YPGNPDYAVARKAAVAALKKGGAAP---LAVGSDPRNLQAFMDRGNAFYGKRKYDRAIAE 1019

Query: 404  PADKGGKTVVMD---KADYTQKMTSILNSNDYEIIPGDPTKTIEESEKYGNLENESGQKH 460
             +    + + +D    + Y  + TS++    Y+    D  K IE    Y  ++   G+  
Sbjct: 1020 YS----RAIALDPRKASAYVGRGTSLVAKGKYDAAITDYGKVIELYPAY--VDAYIGRAV 1073

Query: 461  AAS---DFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFH 517
            A S   +  +A AD     ++DP  A  Y+ RG ++   G+Y++A+ + D+ + L+P   
Sbjct: 1074 AWSKKNELDRAIADYSRVIELDPQYAPVYFGRGSVWFTKGEYDQAIADYDQALRLDPKLA 1133

Query: 518  VARAQRHFV 526
            +AR  R   
Sbjct: 1134 LARKGRQIA 1142



 Score = 55.8 bits (133), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 55/253 (21%), Positives = 107/253 (42%), Gaps = 11/253 (4%)

Query: 104  RATVYIFTSQSTKAIEDLTQLVEDTSVDPKIKVNAHIKRAVVHLHA-ASDFTKAFADLDE 162
            R +V+    +  +AI D  Q +    +DPK+ +    ++  +   A AS           
Sbjct: 1105 RGSVWFTKGEYDQAIADYDQALR---LDPKLALARKGRQIAMAAKANASKMPGKAVGEAP 1161

Query: 163  AEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQRHFVVHKMIVPG 222
            A+    + A   + +G        Y+ A+    K IA  P FH A     ++   M    
Sbjct: 1162 AKPSSASPAAQAFSKGWTLHEKNDYDGAIALYGKAIAFFPAFHDA-----YLARAMAWEA 1216

Query: 223  DRERVEQSLKEFRNFVDTHSNVVEACTLFAQVLVDQEDFDGAEEYFNRSIRVDPENASLY 282
             R+    ++ ++   +  + N+ E      Q L  Q D+DGA   ++++I ++  +A +Y
Sbjct: 1217 KRD-YAHAVADYSQAIALNPNLAETYYDRGQNLGFQGDYDGALADYDKAISLNTRDAKVY 1275

Query: 283  VHRAMLMLQARGNVDEAIKLIEKAISIDKSCMFAYETLGTIEVQRGRLEEAVKCFNKALP 342
              R ++ +  R     A++  EKA+ +D+   FAY   G I + +   + A+   ++ + 
Sbjct: 1276 ADRGLIWM-GRHEDAAALRDFEKALGLDRKNPFAYLGRGVIRISKADYDGAIADLSQTIK 1334

Query: 343  LARDEAELSHIYS 355
            L  D A    + S
Sbjct: 1335 LKPDFATAYKVRS 1347



 Score = 54.3 bits (129), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 100/464 (21%), Positives = 175/464 (37%), Gaps = 64/464 (13%)

Query: 106  TVYIFTSQSTKAIEDLTQLVED----TSVDPKIKVNAHIKRAVVHLHAASDFTKAFADLD 161
            + Y+    +    ED    + D     + DPK+ V+A+    +   H   D  +A     
Sbjct: 866  SAYVRRGMAKATTEDAEGALADCGRAAAFDPKL-VDAYFCMGMA-WHVNGDSQRAITAYS 923

Query: 162  EAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIAL---NPNFHVA----------- 207
             A ++D   A SYY RG        Y  A+ + D+ I L   NP++ VA           
Sbjct: 924  AAIEIDAKDAPSYYGRGIERADSKDYSGAIADFDQAIRLYPGNPDYAVARKAAVAALKKG 983

Query: 208  -----------RAQRHFVVHKMIVPGDRERVEQSLKEFRNFVDTHSNVVEACTLFAQVLV 256
                       R  + F+       G R + ++++ E+   +        A       LV
Sbjct: 984  GAAPLAVGSDPRNLQAFMDRGNAFYGKR-KYDRAIAEYSRAIALDPRKASAYVGRGTSLV 1042

Query: 257  DQEDFDGAEEYFNRSIRVDPENASLYVHRAMLMLQARGNVDEAIKLIEKAISIDKSCMFA 316
             +  +D A   + + I + P     Y+ RA+   + +  +D AI    + I +D      
Sbjct: 1043 AKGKYDAAITDYGKVIELYPAYVDAYIGRAVAWSK-KNELDRAIADYSRVIELDPQYAPV 1101

Query: 317  YETLGTIEVQRGRLEEAVKCFNKAL------PLARDEAELSHIYSLRDAAIAQMKVCERY 370
            Y   G++   +G  ++A+  +++AL       LAR   +++       + +    V E  
Sbjct: 1102 YFGRGSVWFTKGEYDQAIADYDQALRLDPKLALARKGRQIAMAAKANASKMPGKAVGEAP 1161

Query: 371  NIKKKVSPRSQNITKNEKLAIKQLRENND----IIIRPADKGGKTVVMDKA---DYTQKM 423
                  SP +Q  +K        L E ND    I +      GK +    A    Y  + 
Sbjct: 1162 AKPSSASPAAQAFSKGW-----TLHEKNDYDGAIALY-----GKAIAFFPAFHDAYLARA 1211

Query: 424  TSILNSNDYEIIPGDPTKTIEESEKYGNLENESGQKHA-ASDFTKAFADLDEAEKVDPNV 482
             +     DY     D ++ I  +        + GQ      D+  A AD D+A  ++   
Sbjct: 1212 MAWEAKRDYAHAVADYSQAIALNPNLAETYYDRGQNLGFQGDYDGALADYDKAISLNTRD 1271

Query: 483  ADSYYQRGQIYCLFGQYEEA--LRNLDKTIAL---NPNFHVARA 521
            A  Y  RG I+   G++E+A  LR+ +K + L   NP  ++ R 
Sbjct: 1272 AKVYADRGLIW--MGRHEDAAALRDFEKALGLDRKNPFAYLGRG 1313



 Score = 52.8 bits (125), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 50/226 (22%), Positives = 97/226 (42%), Gaps = 8/226 (3%)

Query: 118 IEDLTQLVEDTSVDPKIKVNAHIKRAVVHLHAASDFTKAFADLDEAEKVDPNVADSYYQR 177
           I   T + ED +   + +V A+  R     +   +  +A AD +    ++P+ +D YY R
Sbjct: 63  IAACTPIAEDKTESSRNRVIAYFNRGTAWYNKGEN-DRAIADFNVTISLEPDSSDPYYSR 121

Query: 178 GQIYCLFGQYEEALRNLDKTIALNPNFHVARAQRHFVVHKMIVPGDRERVEQSLKEFRNF 237
           G  +   G+ + A+ + ++ IA +PN   A      V  +    GD +R   ++ E+   
Sbjct: 122 GLAFFRKGKTDAAIIDFEQAIAADPNNGKAHNNLGVVWQQK---GDHDR---AITEYGEA 175

Query: 238 VDTHSNVVEACTLFAQVLVDQEDFDGAEEYFNRSIRVDPENASLYVHRAMLMLQARGNVD 297
           + +    V+A          + DFD A   F+ +   DPE+   Y  R+   + A+ +  
Sbjct: 176 IRSDPRDVQAYVNRGIARASRGDFDLAIADFDAATGFDPESVDAYASRSAAWI-AKSDWA 234

Query: 298 EAIKLIEKAISIDKSCMFAYETLGTIEVQRGRLEEAVKCFNKALPL 343
            A    ++A+ +D + +  Y          G  + A+  F+K + L
Sbjct: 235 RAFADADRAVGLDSTSIDGYYNRAVALTNSGDDDRAIADFDKVIAL 280



 Score = 50.1 bits (118), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 77/366 (21%), Positives = 136/366 (37%), Gaps = 58/366 (15%)

Query: 153 FTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQRH 212
           + +A    ++A  +D N   +Y+ RG+ +     Y++A+ + DK I L PNF  A  +R 
Sbjct: 589 YDQAIGAYNQAISLDANDRFAYFGRGKAWAAKRAYKQAIADYDKVIELAPNFAAAHFRRG 648

Query: 213 FVVHKMIVPGDRERVEQSLKEFRNFVDTHSNVVEACTLFAQVLVDQEDFDGAEEYFNRSI 272
                 +  GD E                                     GA    +R+ 
Sbjct: 649 LA---KVTSGDAE-------------------------------------GALADCSRAA 668

Query: 273 RVDPENASLYVHRAMLMLQARGNVDEAIKLIEKAISIDKSCMFAYETLGTIEVQRGRLEE 332
            +D +    Y  + M   QA+G+   A+     A+ ID     +Y   G     R   + 
Sbjct: 669 TLDAKARDAYFCKGM-AWQAKGDAARAVAAYSVALEIDPKDDASYYGRGMARAGRKDYDG 727

Query: 333 AVKCFNKALPLARDEAELSHIYSLRDAAI--AQMKVCERYNIKKKVSPRSQNITKNEKLA 390
           A+  F+KA+ L  D     ++ S R A    A+++      + + V   SQ   +     
Sbjct: 728 AIADFDKAIGL--DPGNADYLASRRAAVATKAELQPGAEPAVLQDVDNDSQPEARLSTAE 785

Query: 391 IKQLRENNDIIIRPADKGGKTVVMDKADYTQKMTSILNSNDYEIIPGDPTKTIEESEKYG 450
           + +L +  D  +  A + G + + D   Y Q +++   +     I  DP   +     Y 
Sbjct: 786 MAKLIQATDPRVLAAVRQGDS-LSDAGKYDQAISAYGKA-----IALDPDSPLA----YF 835

Query: 451 NLENESGQKHAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTI 510
              N    K A   + +A  D D   ++ PN+  +Y +RG         E AL +  +  
Sbjct: 836 GRANAWDDKRA---YDRAIDDYDRVIELLPNMVSAYVRRGMAKATTEDAEGALADCGRAA 892

Query: 511 ALNPNF 516
           A +P  
Sbjct: 893 AFDPKL 898



 Score = 46.6 bits (109), Expect = 0.034,   Method: Compositional matrix adjust.
 Identities = 61/253 (24%), Positives = 98/253 (38%), Gaps = 24/253 (9%)

Query: 98  ALARLLRATVYIFTSQSTKAIEDLTQLVEDTSVDPKIKVNAHIKRAVVHLHAASDFTKAF 157
           A A   R    + +  +  A+ D ++     ++D K + +A+  + +    A  D  +A 
Sbjct: 641 AAAHFRRGLAKVTSGDAEGALADCSRAA---TLDAKAR-DAYFCKGMA-WQAKGDAARAV 695

Query: 158 ADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNP-NFHVARAQRHFVVH 216
           A    A ++DP    SYY RG        Y+ A+ + DK I L+P N     ++R  V  
Sbjct: 696 AAYSVALEIDPKDDASYYGRGMARAGRKDYDGAIADFDKAIGLDPGNADYLASRRAAVAT 755

Query: 217 KM-IVPGDRERVEQ------------SLKEFRNFVDTHSNVVEACTLFAQVLVDQEDFDG 263
           K  + PG    V Q            S  E    +      V A       L D   +D 
Sbjct: 756 KAELQPGAEPAVLQDVDNDSQPEARLSTAEMAKLIQATDPRVLAAVRQGDSLSDAGKYDQ 815

Query: 264 AEEYFNRSIRVDPENASLYVHRAMLMLQARGNVDEAIKLIEKAISIDKSCMFAYETLG-- 321
           A   + ++I +DP++   Y  RA      R   D AI   ++ I +  + + AY   G  
Sbjct: 816 AISAYGKAIALDPDSPLAYFGRANAWDDKRA-YDRAIDDYDRVIELLPNMVSAYVRRGMA 874

Query: 322 --TIEVQRGRLEE 332
             T E   G L +
Sbjct: 875 KATTEDAEGALAD 887



 Score = 44.3 bits (103), Expect = 0.16,   Method: Compositional matrix adjust.
 Identities = 88/390 (22%), Positives = 152/390 (38%), Gaps = 39/390 (10%)

Query: 156 AFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQR-HFV 214
           A  D D+A  +DP  A++Y+ R     L G    A  +  +   L+P    + ++R    
Sbjct: 473 ALLDFDKAISLDPESAEAYFSRAGARALKGDTAGAAADCRRAAELDPKRAASCSERVAGN 532

Query: 215 VHKMIVPGDRERVE-----------QSLKEFRNFVDTHSNVVEACTLFAQVLVDQEDFDG 263
             K   P D +R +           Q     R    T    +EA  L     +D   +D 
Sbjct: 533 ESKSAPPPDTQRPKLRAVVPNITAIQDTLAARAMEATDPQTLEA-VLGGDAFLDMGKYDQ 591

Query: 264 AEEYFNRSIRVDPENASLYVHRAMLMLQARGNVDEAIKLIEKAISIDKSCMFAYETLGTI 323
           A   +N++I +D  +   Y  R       R    +AI   +K I +  +   A+   G  
Sbjct: 592 AIGAYNQAISLDANDRFAYFGRGKAWAAKRA-YKQAIADYDKVIELAPNFAAAHFRRGLA 650

Query: 324 EVQRGRLEEAVKCFNKALPLARDEAELSHIYSLRDAAIAQMKVCER----YNIKKKVSPR 379
           +V  G  E A+   ++A  L   +A+    Y  +  A        R    Y++  ++ P+
Sbjct: 651 KVTSGDAEGALADCSRAATL---DAKARDAYFCKGMAWQAKGDAARAVAAYSVALEIDPK 707

Query: 380 SQNITKNEKLAIKQLRENNDIIIRPADKGGKTVVMD--KADYTQKMTSILNSNDYEIIPG 437
                    +A +  R++ D  I   D   K + +D   ADY     + + +   E+ PG
Sbjct: 708 DDASYYGRGMA-RAGRKDYDGAIADFD---KAIGLDPGNADYLASRRAAVATK-AELQPG 762

Query: 438 DPTKTIEESEKYGNLENESGQKHAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFG 497
                +++      ++N+S  +   S  T   A L +A   DP V  +  Q G      G
Sbjct: 763 AEPAVLQD------VDNDSQPEARLS--TAEMAKLIQA--TDPRVLAAVRQ-GDSLSDAG 811

Query: 498 QYEEALRNLDKTIALNPNFHVARAQRHFVW 527
           +Y++A+    K IAL+P+  +A   R   W
Sbjct: 812 KYDQAISAYGKAIALDPDSPLAYFGRANAW 841


>gi|359789328|ref|ZP_09292277.1| TPR repeat-containing protein [Mesorhizobium alhagi CCNWXJ12-2]
 gi|359254819|gb|EHK57790.1| TPR repeat-containing protein [Mesorhizobium alhagi CCNWXJ12-2]
          Length = 281

 Score = 71.6 bits (174), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 55/183 (30%), Positives = 86/183 (46%), Gaps = 41/183 (22%)

Query: 167 DPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQRHFVVHKMIVPGDRER 226
           +P+  ++Y  RG  Y   G+Y+EALR+ DK + L PNF+ A A R  ++H+ +  GD+  
Sbjct: 61  NPSDPEAYNVRGSAYGRGGKYQEALRDFDKALQLRPNFYQAYANRA-LIHRFL--GDQ-- 115

Query: 227 VEQSLKEFRNFVDTHSNVVEACTLFAQVLVDQEDFDGAEEYFNRSIRVDPENASLYVHRA 286
                                    A  L D          +NRSI+++P   + Y+ R 
Sbjct: 116 -------------------------ASALAD----------YNRSIQLNPSYDAAYIGRG 140

Query: 287 MLMLQARGNVDEAIKLIEKAISIDKSCMFAYETLGTIEVQRGRLEEAVKCFNKALPLARD 346
            L  +A G V EA    ++AI +D +   AY   G I   +G+   A++ F+ A+ LA D
Sbjct: 141 NLYRKA-GRVQEAFSDFQRAIQLDTTDPRAYHNRGLIYQSQGQHAFAIEDFSTAISLAPD 199

Query: 347 EAE 349
            AE
Sbjct: 200 AAE 202



 Score = 54.3 bits (129), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 53/230 (23%), Positives = 96/230 (41%), Gaps = 12/230 (5%)

Query: 114 STKAIEDLTQLVEDTSVDPKIKVNAHIKRAVVHLHAASDFTKAFADLDEAEKVDPNVADS 173
           S + I  LT ++E    DP+    A+  R   +      + +A  D D+A ++ PN   +
Sbjct: 47  SDENISSLTAVIERNPSDPE----AYNVRGSAYGRGGK-YQEALRDFDKALQLRPNFYQA 101

Query: 174 YYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQRHFVVHKMIVPGDRERVEQSLKE 233
           Y  R  I+   G    AL + +++I LNP++  A   R  +  K        RV+++  +
Sbjct: 102 YANRALIHRFLGDQASALADYNRSIQLNPSYDAAYIGRGNLYRKA------GRVQEAFSD 155

Query: 234 FRNFVDTHSNVVEACTLFAQVLVDQEDFDGAEEYFNRSIRVDPENASLYVHRAMLMLQAR 293
           F+  +   +    A      +   Q     A E F+ +I + P+ A  Y  R +  + A 
Sbjct: 156 FQRAIQLDTTDPRAYHNRGLIYQSQGQHAFAIEDFSTAISLAPDAAEPYNGRGLSYI-AT 214

Query: 294 GNVDEAIKLIEKAISIDKSCMFAYETLGTIEVQRGRLEEAVKCFNKALPL 343
            + + A      AI +D     ++     I  +RG  + A K + +A  L
Sbjct: 215 NDEENAFADFNMAIKLDGKIAESWANQALIYERRGDKQRAAKSYARAAQL 264



 Score = 45.4 bits (106), Expect = 0.082,   Method: Compositional matrix adjust.
 Identities = 20/48 (41%), Positives = 30/48 (62%)

Query: 479 DPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQRHFV 526
           +P+  ++Y  RG  Y   G+Y+EALR+ DK + L PNF+ A A R  +
Sbjct: 61  NPSDPEAYNVRGSAYGRGGKYQEALRDFDKALQLRPNFYQAYANRALI 108



 Score = 40.4 bits (93), Expect = 2.2,   Method: Compositional matrix adjust.
 Identities = 29/117 (24%), Positives = 48/117 (41%), Gaps = 15/117 (12%)

Query: 423 MTSILNSNDYEIIPGDPTKTIEESEKYGNLENESGQKHAASDFTKAFADLDEAEKVDPNV 482
           +T+++  N     P DP         YG              + +A  D D+A ++ PN 
Sbjct: 54  LTAVIERN-----PSDPEAYNVRGSAYGR----------GGKYQEALRDFDKALQLRPNF 98

Query: 483 ADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQRHFVWTSTLAELMAFSD 539
             +Y  R  I+   G    AL + +++I LNP++  A   R  ++        AFSD
Sbjct: 99  YQAYANRALIHRFLGDQASALADYNRSIQLNPSYDAAYIGRGNLYRKAGRVQEAFSD 155


>gi|306846174|ref|ZP_07478736.1| TPR domain-containing protein [Brucella inopinata BO1]
 gi|306273425|gb|EFM55286.1| TPR domain-containing protein [Brucella inopinata BO1]
          Length = 283

 Score = 71.2 bits (173), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 55/183 (30%), Positives = 87/183 (47%), Gaps = 7/183 (3%)

Query: 167 DPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQRHFVVHKMIVPGDRER 226
           +P   + Y  RG  Y   G+Y+EA+R+ D+ IALNPNF+ A A R  V   M   GD  +
Sbjct: 64  NPRDPEGYNVRGSAYGKAGRYKEAMRDFDQAIALNPNFYQAYANRALVDRYM---GDNNK 120

Query: 227 VEQSLKEFRNFVDTHSNVVEACTLFAQVLVDQEDFDGAEEYFNRSIRVDPENASLYVHRA 286
              +++++   +  +     A      V       D A   FN++I +   +   Y +R 
Sbjct: 121 ---AVQDYSRAIQLNPQYDAAYIGRGNVYRQAGRLDQALNDFNQAIALRTTDGRAYHNRG 177

Query: 287 MLMLQARGNVDEAIKLIEKAISIDKSCMFAYETLGTIEVQRGRLEEAVKCFNKALPLARD 346
            L+ QA+G   +AI+   KAIS++ +    Y   G   V  G  + A   FN A+ L ++
Sbjct: 178 -LIYQAKGLHKQAIEDFSKAISLNSTAPEPYNGRGISYVALGDYDNAFDDFNTAITLDQN 236

Query: 347 EAE 349
            AE
Sbjct: 237 VAE 239



 Score = 49.3 bits (116), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 47/208 (22%), Positives = 93/208 (44%), Gaps = 12/208 (5%)

Query: 103 LRATVYIFTSQSTKAIEDLTQLVEDTSVDPKIKVNAHIKRAVVHLHAASDFTKAFADLDE 162
           +R + Y    +  +A+ D  Q +   +++P     A+  RA+V  +   D  KA  D   
Sbjct: 73  VRGSAYGKAGRYKEAMRDFDQAI---ALNPNF-YQAYANRALVDRYMG-DNNKAVQDYSR 127

Query: 163 AEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQRHFVVHKMIVPG 222
           A +++P    +Y  RG +Y   G+ ++AL + ++ IAL      A   R  +     +  
Sbjct: 128 AIQLNPQYDAAYIGRGNVYRQAGRLDQALNDFNQAIALRTTDGRAYHNRGLIYQAKGLH- 186

Query: 223 DRERVEQSLKEFRNFVDTHSNVVEACTLFAQVLVDQEDFDGAEEYFNRSIRVDPENASLY 282
                +Q++++F   +  +S   E         V   D+D A + FN +I +D   A  +
Sbjct: 187 -----KQAIEDFSKAISLNSTAPEPYNGRGISYVALGDYDNAFDDFNTAITLDQNVAESW 241

Query: 283 VHRAMLMLQARGNVDEAIKLIEKAISID 310
            ++A L+ +  G+  +A     +A+ +D
Sbjct: 242 ANQA-LVYEHNGDKAKAANSYARAVQLD 268



 Score = 48.1 bits (113), Expect = 0.010,   Method: Compositional matrix adjust.
 Identities = 22/48 (45%), Positives = 30/48 (62%)

Query: 479 DPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQRHFV 526
           +P   + Y  RG  Y   G+Y+EA+R+ D+ IALNPNF+ A A R  V
Sbjct: 64  NPRDPEGYNVRGSAYGKAGRYKEAMRDFDQAIALNPNFYQAYANRALV 111



 Score = 40.4 bits (93), Expect = 2.4,   Method: Compositional matrix adjust.
 Identities = 24/85 (28%), Positives = 47/85 (55%), Gaps = 1/85 (1%)

Query: 268 FNRSIRVDPENASLYVHRAMLMLQARGNVDEAIKLIEKAISIDKSCMFAYETLGTIEVQR 327
           F+++I ++P     Y +RA L+ +  G+ ++A++   +AI ++     AY   G +  Q 
Sbjct: 91  FDQAIALNPNFYQAYANRA-LVDRYMGDNNKAVQDYSRAIQLNPQYDAAYIGRGNVYRQA 149

Query: 328 GRLEEAVKCFNKALPLARDEAELSH 352
           GRL++A+  FN+A+ L   +    H
Sbjct: 150 GRLDQALNDFNQAIALRTTDGRAYH 174



 Score = 38.5 bits (88), Expect = 9.3,   Method: Compositional matrix adjust.
 Identities = 26/105 (24%), Positives = 50/105 (47%), Gaps = 5/105 (4%)

Query: 104 RATVYIFTSQSTKAIEDLTQLVEDTSVDPKIKVNAHIKRAVVHLHAASDFTKAFADLDEA 163
           R  +Y       +AIED ++ +   S  P+     +  R + ++ A  D+  AF D + A
Sbjct: 176 RGLIYQAKGLHKQAIEDFSKAISLNSTAPE----PYNGRGISYV-ALGDYDNAFDDFNTA 230

Query: 164 EKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVAR 208
             +D NVA+S+  +  +Y   G   +A  +  + + L+P +  A+
Sbjct: 231 ITLDQNVAESWANQALVYEHNGDKAKAANSYARAVQLDPKYKPAK 275


>gi|261220776|ref|ZP_05935057.1| TPR repeat-containing protein [Brucella ceti B1/94]
 gi|261312977|ref|ZP_05952174.1| TPR repeat-containing protein [Brucella pinnipedialis M163/99/10]
 gi|261318373|ref|ZP_05957570.1| TPR repeat-containing protein [Brucella pinnipedialis B2/94]
 gi|261757156|ref|ZP_06000865.1| RNA-binding region RNP-1 [Brucella sp. F5/99]
 gi|265986173|ref|ZP_06098730.1| TPR repeat-containing protein [Brucella pinnipedialis M292/94/1]
 gi|265995868|ref|ZP_06108425.1| TPR repeat-containing protein [Brucella ceti M490/95/1]
 gi|340792731|ref|YP_004758195.1| TPR repeat domain-containing protein [Brucella pinnipedialis B2/94]
 gi|260919360|gb|EEX86013.1| TPR repeat-containing protein [Brucella ceti B1/94]
 gi|261297596|gb|EEY01093.1| TPR repeat-containing protein [Brucella pinnipedialis B2/94]
 gi|261302003|gb|EEY05500.1| TPR repeat-containing protein [Brucella pinnipedialis M163/99/10]
 gi|261737140|gb|EEY25136.1| RNA-binding region RNP-1 [Brucella sp. F5/99]
 gi|262550165|gb|EEZ06326.1| TPR repeat-containing protein [Brucella ceti M490/95/1]
 gi|264658370|gb|EEZ28631.1| TPR repeat-containing protein [Brucella pinnipedialis M292/94/1]
 gi|340561190|gb|AEK56427.1| TPR repeat domain-containing protein [Brucella pinnipedialis B2/94]
          Length = 295

 Score = 71.2 bits (173), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 55/183 (30%), Positives = 87/183 (47%), Gaps = 7/183 (3%)

Query: 167 DPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQRHFVVHKMIVPGDRER 226
           +P   + Y  RG  Y   G+Y+EA+R+ D+ IALNPNF+ A A R  V   M   GD  +
Sbjct: 76  NPRDPEGYNVRGSAYGKAGRYKEAMRDFDQAIALNPNFYQAYANRALVDRYM---GDNNK 132

Query: 227 VEQSLKEFRNFVDTHSNVVEACTLFAQVLVDQEDFDGAEEYFNRSIRVDPENASLYVHRA 286
              +++++   +  +     A      V       D A   FN++I +   +   Y +R 
Sbjct: 133 ---AVQDYSRAIQLNPQYDAAYIGRGNVYRQAGHLDQALNDFNQAIALRTTDGRAYHNRG 189

Query: 287 MLMLQARGNVDEAIKLIEKAISIDKSCMFAYETLGTIEVQRGRLEEAVKCFNKALPLARD 346
            L+ QA+G   +AI+   KAIS++ +    Y   G   V  G  + A   FN A+ L ++
Sbjct: 190 -LIYQAKGLHKQAIEDFSKAISLNSTAPEPYNGRGISYVALGDYDNAFDDFNTAITLDQN 248

Query: 347 EAE 349
            AE
Sbjct: 249 VAE 251



 Score = 48.1 bits (113), Expect = 0.011,   Method: Compositional matrix adjust.
 Identities = 22/48 (45%), Positives = 30/48 (62%)

Query: 479 DPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQRHFV 526
           +P   + Y  RG  Y   G+Y+EA+R+ D+ IALNPNF+ A A R  V
Sbjct: 76  NPRDPEGYNVRGSAYGKAGRYKEAMRDFDQAIALNPNFYQAYANRALV 123



 Score = 47.0 bits (110), Expect = 0.027,   Method: Compositional matrix adjust.
 Identities = 46/208 (22%), Positives = 91/208 (43%), Gaps = 12/208 (5%)

Query: 103 LRATVYIFTSQSTKAIEDLTQLVEDTSVDPKIKVNAHIKRAVVHLHAASDFTKAFADLDE 162
           +R + Y    +  +A+ D  Q +   +++P     A+  RA+V  +   D  KA  D   
Sbjct: 85  VRGSAYGKAGRYKEAMRDFDQAI---ALNPNF-YQAYANRALVDRYMG-DNNKAVQDYSR 139

Query: 163 AEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQRHFVVHKMIVPG 222
           A +++P    +Y  RG +Y   G  ++AL + ++ IAL      A   R  +     +  
Sbjct: 140 AIQLNPQYDAAYIGRGNVYRQAGHLDQALNDFNQAIALRTTDGRAYHNRGLIYQAKGLH- 198

Query: 223 DRERVEQSLKEFRNFVDTHSNVVEACTLFAQVLVDQEDFDGAEEYFNRSIRVDPENASLY 282
                +Q++++F   +  +S   E         V   D+D A + FN +I +D   A  +
Sbjct: 199 -----KQAIEDFSKAISLNSTAPEPYNGRGISYVALGDYDNAFDDFNTAITLDQNVAESW 253

Query: 283 VHRAMLMLQARGNVDEAIKLIEKAISID 310
            ++A L+ +  G+  +A     + + +D
Sbjct: 254 ANQA-LVYEHNGDKAKAANSYARTVQLD 280



 Score = 40.8 bits (94), Expect = 2.0,   Method: Compositional matrix adjust.
 Identities = 27/105 (25%), Positives = 51/105 (48%), Gaps = 5/105 (4%)

Query: 104 RATVYIFTSQSTKAIEDLTQLVEDTSVDPKIKVNAHIKRAVVHLHAASDFTKAFADLDEA 163
           R  +Y       +AIED ++ +   S  P+     +  R + ++ A  D+  AF D + A
Sbjct: 188 RGLIYQAKGLHKQAIEDFSKAISLNSTAPE----PYNGRGISYV-ALGDYDNAFDDFNTA 242

Query: 164 EKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVAR 208
             +D NVA+S+  +  +Y   G   +A  +  +T+ L+P +  A+
Sbjct: 243 ITLDQNVAESWANQALVYEHNGDKAKAANSYARTVQLDPKYKPAK 287


>gi|306841308|ref|ZP_07474017.1| TPR domain-containing protein [Brucella sp. BO2]
 gi|306288611|gb|EFM59947.1| TPR domain-containing protein [Brucella sp. BO2]
          Length = 283

 Score = 71.2 bits (173), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 55/183 (30%), Positives = 87/183 (47%), Gaps = 7/183 (3%)

Query: 167 DPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQRHFVVHKMIVPGDRER 226
           +P   + Y  RG  Y   G+Y+EA+R+ D+ IALNPNF+ A A R  V   M   GD  +
Sbjct: 64  NPRDPEGYNVRGSAYGKAGRYKEAMRDFDQAIALNPNFYQAYANRALVDRYM---GDNNK 120

Query: 227 VEQSLKEFRNFVDTHSNVVEACTLFAQVLVDQEDFDGAEEYFNRSIRVDPENASLYVHRA 286
              +++++   +  +     A      V       D A   FN++I +   +   Y +R 
Sbjct: 121 ---AVQDYSRAIQLNPQYDAAYIGRGNVYRQAGRLDQALNDFNQAIALRTTDGRAYHNRG 177

Query: 287 MLMLQARGNVDEAIKLIEKAISIDKSCMFAYETLGTIEVQRGRLEEAVKCFNKALPLARD 346
            L+ QA+G   +AI+   KAIS++ +    Y   G   V  G  + A   FN A+ L ++
Sbjct: 178 -LIYQAKGLHKQAIEDFSKAISLNSTAPEPYNGRGISYVALGDYDNAFDDFNTAITLDQN 236

Query: 347 EAE 349
            AE
Sbjct: 237 VAE 239



 Score = 49.3 bits (116), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 47/208 (22%), Positives = 93/208 (44%), Gaps = 12/208 (5%)

Query: 103 LRATVYIFTSQSTKAIEDLTQLVEDTSVDPKIKVNAHIKRAVVHLHAASDFTKAFADLDE 162
           +R + Y    +  +A+ D  Q +   +++P     A+  RA+V  +   D  KA  D   
Sbjct: 73  VRGSAYGKAGRYKEAMRDFDQAI---ALNPNF-YQAYANRALVDRYMG-DNNKAVQDYSR 127

Query: 163 AEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQRHFVVHKMIVPG 222
           A +++P    +Y  RG +Y   G+ ++AL + ++ IAL      A   R  +     +  
Sbjct: 128 AIQLNPQYDAAYIGRGNVYRQAGRLDQALNDFNQAIALRTTDGRAYHNRGLIYQAKGLH- 186

Query: 223 DRERVEQSLKEFRNFVDTHSNVVEACTLFAQVLVDQEDFDGAEEYFNRSIRVDPENASLY 282
                +Q++++F   +  +S   E         V   D+D A + FN +I +D   A  +
Sbjct: 187 -----KQAIEDFSKAISLNSTAPEPYNGRGISYVALGDYDNAFDDFNTAITLDQNVAESW 241

Query: 283 VHRAMLMLQARGNVDEAIKLIEKAISID 310
            ++A L+ +  G+  +A     +A+ +D
Sbjct: 242 ANQA-LVYEHNGDKAKAANSYARAVQLD 268



 Score = 48.1 bits (113), Expect = 0.010,   Method: Compositional matrix adjust.
 Identities = 22/48 (45%), Positives = 30/48 (62%)

Query: 479 DPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQRHFV 526
           +P   + Y  RG  Y   G+Y+EA+R+ D+ IALNPNF+ A A R  V
Sbjct: 64  NPRDPEGYNVRGSAYGKAGRYKEAMRDFDQAIALNPNFYQAYANRALV 111



 Score = 40.4 bits (93), Expect = 2.6,   Method: Compositional matrix adjust.
 Identities = 24/85 (28%), Positives = 47/85 (55%), Gaps = 1/85 (1%)

Query: 268 FNRSIRVDPENASLYVHRAMLMLQARGNVDEAIKLIEKAISIDKSCMFAYETLGTIEVQR 327
           F+++I ++P     Y +RA L+ +  G+ ++A++   +AI ++     AY   G +  Q 
Sbjct: 91  FDQAIALNPNFYQAYANRA-LVDRYMGDNNKAVQDYSRAIQLNPQYDAAYIGRGNVYRQA 149

Query: 328 GRLEEAVKCFNKALPLARDEAELSH 352
           GRL++A+  FN+A+ L   +    H
Sbjct: 150 GRLDQALNDFNQAIALRTTDGRAYH 174



 Score = 38.5 bits (88), Expect = 8.4,   Method: Compositional matrix adjust.
 Identities = 26/105 (24%), Positives = 50/105 (47%), Gaps = 5/105 (4%)

Query: 104 RATVYIFTSQSTKAIEDLTQLVEDTSVDPKIKVNAHIKRAVVHLHAASDFTKAFADLDEA 163
           R  +Y       +AIED ++ +   S  P+     +  R + ++ A  D+  AF D + A
Sbjct: 176 RGLIYQAKGLHKQAIEDFSKAISLNSTAPE----PYNGRGISYV-ALGDYDNAFDDFNTA 230

Query: 164 EKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVAR 208
             +D NVA+S+  +  +Y   G   +A  +  + + L+P +  A+
Sbjct: 231 ITLDQNVAESWANQALVYEHNGDKAKAANSYARAVQLDPKYKPAK 275


>gi|27376419|ref|NP_767948.1| hypothetical protein blr1308 [Bradyrhizobium japonicum USDA 110]
 gi|27349559|dbj|BAC46573.1| blr1308 [Bradyrhizobium japonicum USDA 110]
          Length = 458

 Score = 71.2 bits (173), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 91/336 (27%), Positives = 150/336 (44%), Gaps = 33/336 (9%)

Query: 81  IRHCTEEI-ESTSSNHTKALARLLRATVYIFTSQS-TKAIEDLTQLVEDTSVDPKIKVNA 138
           I  C+  I ++ +S+  +A A L+RA     TS   T+A+ D+ + +   ++D K    A
Sbjct: 50  ITSCSAIIDQAANSSSDRAAALLVRADANARTSGGLTQALRDIDRAI---ALDGK-NAKA 105

Query: 139 HIKRAVVHLHAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTI 198
              R  +   A  D  +A ADL +A ++DP  A+SY  RG +Y    + + AL + D+ I
Sbjct: 106 WRLRGDLLREAGGDLNRAAADLSKAIELDPQDAESYELRGVVYTSQRRLDRALADYDQAI 165

Query: 199 ALNPNFHVARAQRHFVVHKMIVPGDRERVEQSLKE-FR---NFVDTHSNVVEACTLFAQV 254
            L P    A + R    +   + GD E+  + L E  R   N   T++N   A     Q 
Sbjct: 166 KLKPGDAQAWSDRGVTYY---LGGDNEKAIRDLSEALRLDPNRPRTYTNRGAAYKKLGQ- 221

Query: 255 LVDQEDFDGAEEYFNRSIRVDPENASLYVHRAMLMLQARGNVDEAIKLIEKAISIDKSCM 314
            +D+   D AE     +IR+DP+    Y +R  L L A G+ D+AI   ++A+ +     
Sbjct: 222 -LDKSVADAAE-----AIRLDPKVPEYYDNRG-LSLAAMGDYDKAIADYDQALRLAPKPN 274

Query: 315 FAYETLGTIEVQRGRLEEAVKCFNKALPLARDEAELSHIYSLRDAAIAQMKVCER----- 369
           F +   G     +G    A+  +  AL L   +   +  Y+ R  A+   K+ ER     
Sbjct: 275 F-FTNRGDSYQFKGEFGAALSDYESALKL---DPNFAQTYNNR--AVLYKKMGERRKALA 328

Query: 370 -YNIKKKVSPRSQNITKNEKLAIKQLRENNDIIIRP 404
            Y    K+ P + N     +  I ++ +  D   RP
Sbjct: 329 DYETALKLDPGNDNAANGRRTMIAEIAKFGDEPRRP 364



 Score = 63.9 bits (154), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 66/288 (22%), Positives = 123/288 (42%), Gaps = 26/288 (9%)

Query: 268 FNRSIRVDPENASLYVHRAMLMLQARGNVDEAIKLIEKAISIDKSCMFAYETLGTIEVQR 327
            +R+I +D +NA  +  R  L+ +A G+++ A   + KAI +D     +YE  G +   +
Sbjct: 92  IDRAIALDGKNAKAWRLRGDLLREAGGDLNRAAADLSKAIELDPQDAESYELRGVVYTSQ 151

Query: 328 GRLEEAVKCFNKALPLARDEAELS-------HIYSLRDAAIAQMKVCERYNIKKKVSPRS 380
            RL+ A+  +++A+ L   +A+         ++    + AI  +    R      + P  
Sbjct: 152 RRLDRALADYDQAIKLKPGDAQAWSDRGVTYYLGGDNEKAIRDLSEALR------LDPNR 205

Query: 381 QNITKNEKLAIKQLRENNDIIIRPADKGGKTVVMDKAD---YTQKMTSILNSNDYEIIPG 437
                N   A K+L + +  +   A+     + +D      Y  +  S+    DY+    
Sbjct: 206 PRTYTNRGAAYKKLGQLDKSVADAAE----AIRLDPKVPEYYDNRGLSLAAMGDYDKAIA 261

Query: 438 DPTKTIEESEKYGNLENESGQKHAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFG 497
           D  + +  + K     N         +F  A +D + A K+DPN A +Y  R  +Y   G
Sbjct: 262 DYDQALRLAPKPNFFTNRGDSYQFKGEFGAALSDYESALKLDPNFAQTYNNRAVLYKKMG 321

Query: 498 QYEEALRNLDKTIALNP-NFHVARAQRHFVWTSTLAELMAFSDEFMIP 544
           +  +AL + +  + L+P N + A  +R  +     AE+  F DE   P
Sbjct: 322 ERRKALADYETALKLDPGNDNAANGRRTMI-----AEIAKFGDEPRRP 364


>gi|428305189|ref|YP_007142014.1| hypothetical protein Cri9333_1614 [Crinalium epipsammum PCC 9333]
 gi|428246724|gb|AFZ12504.1| Tetratricopeptide TPR_2 repeat-containing protein [Crinalium
           epipsammum PCC 9333]
          Length = 423

 Score = 71.2 bits (173), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 61/240 (25%), Positives = 113/240 (47%), Gaps = 16/240 (6%)

Query: 167 DPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQRHFVVHKMIVPGDRER 226
           +P++ D+YY  G I    G+ + A+    + I +NPN+  A+     +  K      +E+
Sbjct: 155 NPSLVDAYYNLGLILEAQGKTDAAIAQYQQAIRINPNYAAAQYNLGLLYLK------QEQ 208

Query: 227 VEQSLKEFRNFVDTHSNVVEACTLFAQVLVDQEDFDGAEEYFNRSIRVDPENASLYVHRA 286
            E ++  F+  V +  +   A      +L  + D D A+   N+++ ++   A       
Sbjct: 209 TEPAIAAFQQAVKSDPSFAPAHYQLGLLLALRNDLDAAKTSLNKAVGLNQGLAQAQYGLG 268

Query: 287 MLMLQARGNVDEAIKLIEKAISIDKSCMFAYETLGTIEVQRGRLEEAVKCFNKALPLARD 346
           ++  Q +G+   AI  +E+AI  D   + AY+ LGT+  QRG  + A+  F +A+ L+ D
Sbjct: 269 VVHAQ-QGDYKAAIGRLEQAIKQDPKNVNAYQQLGTVLTQRGNYKAAIATFKQAIRLSSD 327

Query: 347 EAELSHIYSL-----RDAAIAQMKVCERYNIKKKVSPRSQNITKNEKLAIKQLRENNDII 401
           +A L+H Y+L     RD  + +      Y     ++P   +   N  LA++Q  +  D I
Sbjct: 328 DA-LTH-YNLAVALHRDKQLPE--AIAEYKEAIVLNPNLADAFYNLGLALQQSNQRQDAI 383



 Score = 51.6 bits (122), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 52/225 (23%), Positives = 97/225 (43%), Gaps = 9/225 (4%)

Query: 119 EDLTQLVEDTSVDPKIKVNAHIKRAVVHLHAASDFTKAFADLDEAEKVDPNVADSYYQRG 178
           E + Q     S +P + V+A+    ++ L A      A A   +A +++PN A + Y  G
Sbjct: 143 EAINQYQYALSFNPSL-VDAYYNLGLI-LEAQGKTDAAIAQYQQAIRINPNYAAAQYNLG 200

Query: 179 QIYCLFGQYEEALRNLDKTIALNPNFHVARAQRHFVVHKMIVPGDRERVEQSLKEFRNFV 238
            +Y    Q E A+    + +  +P+F  A  Q   +   + +  D +  + SL +    V
Sbjct: 201 LLYLKQEQTEPAIAAFQQAVKSDPSFAPAHYQLGLL---LALRNDLDAAKTSLNK---AV 254

Query: 239 DTHSNVVEACTLFAQVLVDQEDFDGAEEYFNRSIRVDPENASLYVHRAMLMLQARGNVDE 298
             +  + +A      V   Q D+  A     ++I+ DP+N + Y     ++ Q RGN   
Sbjct: 255 GLNQGLAQAQYGLGVVHAQQGDYKAAIGRLEQAIKQDPKNVNAYQQLGTVLTQ-RGNYKA 313

Query: 299 AIKLIEKAISIDKSCMFAYETLGTIEVQRGRLEEAVKCFNKALPL 343
           AI   ++AI +       +  L     +  +L EA+  + +A+ L
Sbjct: 314 AIATFKQAIRLSSDDALTHYNLAVALHRDKQLPEAIAEYKEAIVL 358



 Score = 51.6 bits (122), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 44/198 (22%), Positives = 90/198 (45%), Gaps = 7/198 (3%)

Query: 152 DFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQR 211
           ++  A   L +A   DP++A ++Y  G      G +  A+     TI L P+        
Sbjct: 72  NYPNAVVALRKALAFDPSLAMAHYLLGNSLAEVGDFSGAVNEYLVTINLQPSLPEVYYNN 131

Query: 212 HFVVHKMIVPGDRERVEQSLKEFRNFVDTHSNVVEACTLFAQVLVDQEDFDGAEEYFNRS 271
              + K+       R+++++ +++  +  + ++V+A      +L  Q   D A   + ++
Sbjct: 132 AVALSKL------GRLDEAINQYQYALSFNPSLVDAYYNLGLILEAQGKTDAAIAQYQQA 185

Query: 272 IRVDPENASLYVHRAMLMLQARGNVDEAIKLIEKAISIDKSCMFAYETLGTIEVQRGRLE 331
           IR++P  A+   +  +L L+ +   + AI   ++A+  D S   A+  LG +   R  L+
Sbjct: 186 IRINPNYAAAQYNLGLLYLK-QEQTEPAIAAFQQAVKSDPSFAPAHYQLGLLLALRNDLD 244

Query: 332 EAVKCFNKALPLARDEAE 349
            A    NKA+ L +  A+
Sbjct: 245 AAKTSLNKAVGLNQGLAQ 262



 Score = 47.4 bits (111), Expect = 0.017,   Method: Compositional matrix adjust.
 Identities = 62/292 (21%), Positives = 114/292 (39%), Gaps = 36/292 (12%)

Query: 223 DRERVEQSLKEFRNFVDTHSNVVEACTLFAQVLVDQEDFDGAEEYFNRSIRVDPENASLY 282
           +R+    ++   R  +    ++  A  L    L +  DF GA   +  +I + P    +Y
Sbjct: 69  NRKNYPNAVVALRKALAFDPSLAMAHYLLGNSLAEVGDFSGAVNEYLVTINLQPSLPEVY 128

Query: 283 VHRAMLMLQARGNVDEAIKLIEKAISIDKSCMFAYETLGTIEVQRGRLEEAVKCFNKALP 342
            + A+  L   G +DEAI   + A+S + S + AY  LG I   +G+ + A+  + +A+ 
Sbjct: 129 YNNAV-ALSKLGRLDEAINQYQYALSFNPSLVDAYYNLGLILEAQGKTDAAIAQYQQAIR 187

Query: 343 LARDEAELSHIYSLRDAAIAQMKVCERYNIKKKVSPRSQNITKNEKLAIKQLRENNDIII 402
           +  + A             AQ  +   Y  +++  P          +A  Q    +D   
Sbjct: 188 INPNYAA------------AQYNLGLLYLKQEQTEP---------AIAAFQQAVKSDPSF 226

Query: 403 RPADKGGKTVVMDKADYTQKMTSILNSNDYEIIPGDPTKTIEESEKYGNLENESGQKHAA 462
            PA      ++  + D     TS+              K +  ++     +   G  HA 
Sbjct: 227 APAHYQLGLLLALRNDLDAAKTSL-------------NKAVGLNQGLAQAQYGLGVVHAQ 273

Query: 463 -SDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALN 513
             D+  A   L++A K DP   ++Y Q G +    G Y+ A+    + I L+
Sbjct: 274 QGDYKAAIGRLEQAIKQDPKNVNAYQQLGTVLTQRGNYKAAIATFKQAIRLS 325



 Score = 46.6 bits (109), Expect = 0.032,   Method: Compositional matrix adjust.
 Identities = 48/190 (25%), Positives = 93/190 (48%), Gaps = 17/190 (8%)

Query: 156 AFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQRHF-V 214
           A A   +A K DP+ A ++YQ G +  L    + A  +L+K + LN    +A+AQ    V
Sbjct: 212 AIAAFQQAVKSDPSFAPAHYQLGLLLALRNDLDAAKTSLNKAVGLNQG--LAQAQYGLGV 269

Query: 215 VHKMIVPGDRE----RVEQSLKEFRNFVDTHSNVVEACTLFAQVLVDQEDFDGAEEYFNR 270
           VH     GD +    R+EQ++K+    V+ +  +         VL  + ++  A   F +
Sbjct: 270 VHAQ--QGDYKAAIGRLEQAIKQDPKNVNAYQQL-------GTVLTQRGNYKAAIATFKQ 320

Query: 271 SIRVDPENASLYVHRAMLMLQARGNVDEAIKLIEKAISIDKSCMFAYETLGTIEVQRGRL 330
           +IR+  ++A  + + A+ + + +  + EAI   ++AI ++ +   A+  LG    Q  + 
Sbjct: 321 AIRLSSDDALTHYNLAVALHRDK-QLPEAIAEYKEAIVLNPNLADAFYNLGLALQQSNQR 379

Query: 331 EEAVKCFNKA 340
           ++A+    +A
Sbjct: 380 QDAISFLAEA 389


>gi|445062480|ref|ZP_21374862.1| hypothetical protein H263_03666 [Brachyspira hampsonii 30599]
 gi|444506126|gb|ELV06506.1| hypothetical protein H263_03666 [Brachyspira hampsonii 30599]
          Length = 365

 Score = 71.2 bits (173), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 59/207 (28%), Positives = 98/207 (47%), Gaps = 12/207 (5%)

Query: 117 AIEDLTQLVEDTSVDPKIKVNAHIKRAVVHLHAASDFTKAFADLDEAEKVDPNVADSYYQ 176
           AI+D  + +E    DP      +  R  V  +A   + +A  DL++A K++P  AD Y  
Sbjct: 164 AIKDFDKSIELKPKDPYY----YSDRGYVK-YALKQYNEAIEDLNKAIKLNPKEADYYNS 218

Query: 177 RGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQRHFVVHKMIVPGDRERVEQSLKEFRN 236
           RG +    G+ EEA+++ +K I LN +F  A   R F  +K+      +   +++K+   
Sbjct: 219 RGLVKSDLGENEEAIKDYNKAIELNTSFIEAYQNRAFSQYKL------KNYNEAIKDCNK 272

Query: 237 FVDTHSNVVEACTLFAQVLVDQEDFDGAEEYFNRSIRVDPENASLYVHRAMLMLQARGNV 296
            ++ +S           V    ED+ GA E FN+SI ++P  A  Y+ R  +     G  
Sbjct: 273 SIELNSFDNYVYNFRGAVKNKLEDYQGAIEDFNKSIEINPFYAKPYLRRGDVKYNL-GQY 331

Query: 297 DEAIKLIEKAISIDKSCMFAYETLGTI 323
            +A++   K I +D S   AYE +  I
Sbjct: 332 KDALEDYNKCIELDDSYTEAYEKIEDI 358



 Score = 68.2 bits (165), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 72/305 (23%), Positives = 137/305 (44%), Gaps = 18/305 (5%)

Query: 55  DTNESHELDLLSKAKRAFEHEDYLTAIRHCTEEIESTSSNHTKALARLLRATVYIFTSQS 114
           D N+ +  +   KA    + E Y  AI++  + IE   +N        +R  V I    +
Sbjct: 3   DENKENAKEFYKKALALKKEEKYEEAIKYFDKAIELQPNNTN---YYNMRGIVKIDAEDN 59

Query: 115 TKAIEDLTQLVEDTSVDPKIKVNAHIKRAVVHLHAASDFTKAFADLDEAEKVDPNVADSY 174
             AI+D T+ +E   ++PK ++ A+    V   +   ++ +A  D D   +  P     Y
Sbjct: 60  EGAIKDFTKCIE---LNPKHRI-AYNNIGVAK-YNLEEYEEAIKDYDICIERLPKADYVY 114

Query: 175 YQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQRHFVVHKMIVPGDRERVEQSLKEF 234
             RG   C  G+YEEA+ +  ++I L P          +   + +     ++ E+++K+F
Sbjct: 115 CNRGDAKCQLGEYEEAIEDYSRSIELKP------KNADYYYFRGLAKNKLKKYEEAIKDF 168

Query: 235 RNFVDTHSNVVEACTLFAQVLVDQEDFDGAEEYFNRSIRVDPENASLYVHRAMLMLQARG 294
              ++         +    V    + ++ A E  N++I+++P+ A  Y  R  L+    G
Sbjct: 169 DKSIELKPKDPYYYSDRGYVKYALKQYNEAIEDLNKAIKLNPKEADYYNSRG-LVKSDLG 227

Query: 295 NVDEAIKLIEKAISIDKSCMFAYETLGTIEVQRGRLEEAVKCFNKALPLARDEAELSHIY 354
             +EAIK   KAI ++ S + AY+     + +     EA+K  NK++ L   +   +++Y
Sbjct: 228 ENEEAIKDYNKAIELNTSFIEAYQNRAFSQYKLKNYNEAIKDCNKSIELNSFD---NYVY 284

Query: 355 SLRDA 359
           + R A
Sbjct: 285 NFRGA 289



 Score = 66.6 bits (161), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 69/281 (24%), Positives = 123/281 (43%), Gaps = 48/281 (17%)

Query: 252 AQVLVDQEDFDGAEEYFNRSIRVDPENASLYVHRAMLMLQARGNVDEAIKLIEKAISIDK 311
           A  L  +E ++ A +YF+++I + P N + Y  R ++ + A  N + AIK   K I ++ 
Sbjct: 16  ALALKKEEKYEEAIKYFDKAIELQPNNTNYYNMRGIVKIDAEDN-EGAIKDFTKCIELNP 74

Query: 312 SCMFAYETLGTIEVQRGRLEEAVKCFN---KALPLARDEAELSHIYSLRDAAIAQM---- 364
               AY  +G  +      EEA+K ++   + LP A       ++Y  R  A  Q+    
Sbjct: 75  KHRIAYNNIGVAKYNLEEYEEAIKDYDICIERLPKA------DYVYCNRGDAKCQLGEYE 128

Query: 365 KVCERYNIKKKVSPRSQNITKNEKLAIKQLRENNDIIIRPADKGGKTVVMDKADYTQKMT 424
           +  E Y+   ++ P++ +      LA  +L++  + I                D+ + + 
Sbjct: 129 EAIEDYSRSIELKPKNADYYYFRGLAKNKLKKYEEAI---------------KDFDKSI- 172

Query: 425 SILNSNDYEIIPGDPTKTIEESEKYGNLENESGQKHAASDFTKAFADLDEAEKVDPNVAD 484
                   E+ P DP              +    K+A   + +A  DL++A K++P  AD
Sbjct: 173 --------ELKPKDPYY----------YSDRGYVKYALKQYNEAIEDLNKAIKLNPKEAD 214

Query: 485 SYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQRHF 525
            Y  RG +    G+ EEA+++ +K I LN +F  A   R F
Sbjct: 215 YYNSRGLVKSDLGENEEAIKDYNKAIELNTSFIEAYQNRAF 255



 Score = 59.3 bits (142), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 80/339 (23%), Positives = 148/339 (43%), Gaps = 16/339 (4%)

Query: 186 QYEEALRNLDKTIALNPNFHVARAQRHFVVHKMIVPGDRERVEQSLKEFRNFVDTHSNVV 245
           +YEEA++  DK I L PN        ++   + IV  D E  E ++K+F   ++ +    
Sbjct: 24  KYEEAIKYFDKAIELQPN------NTNYYNMRGIVKIDAEDNEGAIKDFTKCIELNPKHR 77

Query: 246 EACTLFAQVLVDQEDFDGAEEYFNRSIRVDPENASLYVHRAMLMLQARGNVDEAIKLIEK 305
            A         + E+++ A + ++  I   P+   +Y +R     Q  G  +EAI+   +
Sbjct: 78  IAYNNIGVAKYNLEEYEEAIKDYDICIERLPKADYVYCNRGDAKCQL-GEYEEAIEDYSR 136

Query: 306 AISIDKSCMFAYETLGTIEVQRGRLEEAVKCFNKALPLARDEAELSHIYSLRDAAIAQMK 365
           +I +       Y   G  + +  + EEA+K F+K++ L   +    + YS R      +K
Sbjct: 137 SIELKPKNADYYYFRGLAKNKLKKYEEAIKDFDKSIELKPKDP---YYYSDRGYVKYALK 193

Query: 366 ----VCERYNIKKKVSPRSQNITKNEKLAIKQLRENNDIIIRPADKGGKTVVMDKADYTQ 421
                 E  N   K++P+  +   +  L    L EN + I +  +K  +        Y  
Sbjct: 194 QYNEAIEDLNKAIKLNPKEADYYNSRGLVKSDLGENEEAI-KDYNKAIELNTSFIEAYQN 252

Query: 422 KMTSILNSNDYEIIPGDPTKTIEESEKYGNLENESGQ-KHAASDFTKAFADLDEAEKVDP 480
           +  S     +Y     D  K+IE +     + N  G  K+   D+  A  D +++ +++P
Sbjct: 253 RAFSQYKLKNYNEAIKDCNKSIELNSFDNYVYNFRGAVKNKLEDYQGAIEDFNKSIEINP 312

Query: 481 NVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVA 519
             A  Y +RG +    GQY++AL + +K I L+ ++  A
Sbjct: 313 FYAKPYLRRGDVKYNLGQYKDALEDYNKCIELDDSYTEA 351


>gi|124024558|ref|YP_001018865.1| hypothetical protein P9303_28701 [Prochlorococcus marinus str. MIT
           9303]
 gi|123964844|gb|ABM79600.1| Hypothetical protein P9303_28701 [Prochlorococcus marinus str. MIT
           9303]
          Length = 582

 Score = 71.2 bits (173), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 69/279 (24%), Positives = 120/279 (43%), Gaps = 27/279 (9%)

Query: 96  TKALARLLRATVYIFTSQSTKAIEDLTQLVEDTS----VDPKIKVNAHIKRAVVHLHAAS 151
           T+ALA       Y   + + K ++D    + D S    ++P+   N    R     H   
Sbjct: 285 TQALALRSSGGGYFLRAYAKKKLKDYQGAIADYSKALEINPE-DANTFNNRGNAK-HGLG 342

Query: 152 DFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQR 211
           D+  A +D  +A ++DP  A +Y  RG        Y+ A+ + +K I ++P + +A    
Sbjct: 343 DYQGAISDYTKAIELDPQHALAYDNRGYSKHDLKDYQAAIADYNKAIEIDPQYAIAY--- 399

Query: 212 HFVVHKMIVPGDRERVEQSLKEFRNFVDTHSNVVEACTLFAQVLVDQ-------EDFDGA 264
                      +R   +  LK+++  +  ++  +E     A    ++        D  GA
Sbjct: 400 ----------NNRGTAKDDLKDYQGAIADYNKAIELDPQHAFAFSNRGITKRNLGDTQGA 449

Query: 265 EEYFNRSIRVDPENASLYVHRAMLMLQARGNVDEAIKLIEKAISIDKSCMFAYETLGTIE 324
              +N++I ++P+NA  Y +R  L     G+  EAI    KAI ID     AY + G I+
Sbjct: 450 IADYNKAIEINPQNAIAYNNRG-LAKSNLGSYQEAIADCNKAIQIDPQYAGAYNSRGWIK 508

Query: 325 VQRGRLEEAVKCFNKALPLARDEAELSHIYSLRDAAIAQ 363
             +G  + A+K  NKAL +A ++        L   A+ Q
Sbjct: 509 YLQGDFQGALKDANKALAIAPNDGATLDTRGLAKHALGQ 547



 Score = 53.9 bits (128), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 59/261 (22%), Positives = 109/261 (41%), Gaps = 42/261 (16%)

Query: 259 EDFDGAEEYFNRSIRVDPENASLYVHRAMLMLQARGNVDEAIKLIEKAISIDKSCMFAYE 318
           +D+ GA   +++++ ++PE+A+ + +R        G+   AI    KAI +D     AY+
Sbjct: 308 KDYQGAIADYSKALEINPEDANTFNNRGNAK-HGLGDYQGAISDYTKAIELDPQHALAYD 366

Query: 319 TLGTIEVQRGRLEEAVKCFNKALPLARDEAELSHIYSLRDAAIAQMK----VCERYNIKK 374
             G  +      + A+  +NKA+ +   + + +  Y+ R  A   +K        YN   
Sbjct: 367 NRGYSKHDLKDYQAAIADYNKAIEI---DPQYAIAYNNRGTAKDDLKDYQGAIADYNKAI 423

Query: 375 KVSPRSQNITKNEKLAIKQLRENNDIIIRPADKGGKTVVMDKADYTQKMTSILNSNDYEI 434
           ++ P+      N  +  + L +    I               ADY + +         EI
Sbjct: 424 ELDPQHAFAFSNRGITKRNLGDTQGAI---------------ADYNKAI---------EI 459

Query: 435 IPGDPTKTIEESEKYGNLENESGQKHAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYC 494
              +P   I          N    K     + +A AD ++A ++DP  A +Y  RG I  
Sbjct: 460 ---NPQNAIA-------YNNRGLAKSNLGSYQEAIADCNKAIQIDPQYAGAYNSRGWIKY 509

Query: 495 LFGQYEEALRNLDKTIALNPN 515
           L G ++ AL++ +K +A+ PN
Sbjct: 510 LQGDFQGALKDANKALAIAPN 530



 Score = 41.6 bits (96), Expect = 1.1,   Method: Compositional matrix adjust.
 Identities = 29/109 (26%), Positives = 50/109 (45%), Gaps = 1/109 (0%)

Query: 419 YTQKMTSILNSNDYEIIPGDPTKTIEESEKYG-NLENESGQKHAASDFTKAFADLDEAEK 477
           Y  + T+  +  DY+    D  K IE   ++     N    K    D   A AD ++A +
Sbjct: 399 YNNRGTAKDDLKDYQGAIADYNKAIELDPQHAFAFSNRGITKRNLGDTQGAIADYNKAIE 458

Query: 478 VDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQRHFV 526
           ++P  A +Y  RG      G Y+EA+ + +K I ++P +  A   R ++
Sbjct: 459 INPQNAIAYNNRGLAKSNLGSYQEAIADCNKAIQIDPQYAGAYNSRGWI 507



 Score = 40.4 bits (93), Expect = 2.1,   Method: Compositional matrix adjust.
 Identities = 29/98 (29%), Positives = 45/98 (45%), Gaps = 1/98 (1%)

Query: 430 NDYEIIPGDPTKTIEESEKYG-NLENESGQKHAASDFTKAFADLDEAEKVDPNVADSYYQ 488
            DY+    D TK IE   ++    +N    KH   D+  A AD ++A ++DP  A +Y  
Sbjct: 342 GDYQGAISDYTKAIELDPQHALAYDNRGYSKHDLKDYQAAIADYNKAIEIDPQYAIAYNN 401

Query: 489 RGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQRHFV 526
           RG        Y+ A+ + +K I L+P    A + R   
Sbjct: 402 RGTAKDDLKDYQGAIADYNKAIELDPQHAFAFSNRGIT 439



 Score = 39.7 bits (91), Expect = 4.6,   Method: Compositional matrix adjust.
 Identities = 27/94 (28%), Positives = 46/94 (48%), Gaps = 1/94 (1%)

Query: 431 DYEIIPGDPTKTIEESEKYGNLENESGQ-KHAASDFTKAFADLDEAEKVDPNVADSYYQR 489
           DY+    D +K +E + +  N  N  G  KH   D+  A +D  +A ++DP  A +Y  R
Sbjct: 309 DYQGAIADYSKALEINPEDANTFNNRGNAKHGLGDYQGAISDYTKAIELDPQHALAYDNR 368

Query: 490 GQIYCLFGQYEEALRNLDKTIALNPNFHVARAQR 523
           G        Y+ A+ + +K I ++P + +A   R
Sbjct: 369 GYSKHDLKDYQAAIADYNKAIEIDPQYAIAYNNR 402


>gi|300871059|ref|YP_003785931.1| hypothetical protein BP951000_1446 [Brachyspira pilosicoli 95/1000]
 gi|300688759|gb|ADK31430.1| TPR domain-containing protein [Brachyspira pilosicoli 95/1000]
          Length = 653

 Score = 71.2 bits (173), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 69/248 (27%), Positives = 122/248 (49%), Gaps = 20/248 (8%)

Query: 161 DEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQRHFVVHKMIV 220
           +E  K   N++ +YY  G +     QY+EA+ + DK I LNPN ++A   R   V KM +
Sbjct: 330 EEYSKYKNNISIAYYNIGIVKNNLKQYKEAIEDYDKAIELNPNDYMAYNNRG--VAKMNL 387

Query: 221 PGDRERV---EQSLKEFRNFVDTHSNVVEACTLFAQVLVDQEDFDGAEEYFNRSIRVDPE 277
              +E +   ++S++  +N  +T++N      + A + +++E    A E ++++I ++P 
Sbjct: 388 GQYKEAIKDFDKSIELSQNSSETYNN---RGNVKANLGLNKE----AIEDYDKAIELNPN 440

Query: 278 NASLYVHRAMLMLQARGNVDEAIKLIEKAISIDKSCMFAYETLGTIEVQRGRLEEAVKCF 337
           N+S Y +R  +     G   EAIK  +KAI ++ +   AY   G  +    + EEA+K +
Sbjct: 441 NSSAYNNRG-ISKSDLGLYKEAIKDFDKAIELNPNSSEAYSNRGNAKSDLNQYEEAIKDY 499

Query: 338 NKALPLARDEAELSHIYSLRDAAIAQMKV----CERYNIKKKVSPRSQNITKNEKLAIKQ 393
           NKA+ L       S  Y+ R  A   + +     E YN   +++P +  +  N   A   
Sbjct: 500 NKAIEL---NPNYSEAYNNRGNAKTNLSLYKEAVEDYNKAIELNPNNSEVYNNRGTAKAN 556

Query: 394 LRENNDII 401
           L  N + I
Sbjct: 557 LGNNEEAI 564



 Score = 62.4 bits (150), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 53/228 (23%), Positives = 102/228 (44%), Gaps = 35/228 (15%)

Query: 153 FTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQRH 212
           + +A  D D+A +++PN   +Y  RG      GQY+EA+++ DK+I L+ N       R 
Sbjct: 356 YKEAIEDYDKAIELNPNDYMAYNNRGVAKMNLGQYKEAIKDFDKSIELSQNSSETYNNRG 415

Query: 213 FVV----------------------------HKMIVPGDRERVEQSLKEFRNFVDTHSNV 244
            V                             ++ I   D    ++++K+F   ++ + N 
Sbjct: 416 NVKANLGLNKEAIEDYDKAIELNPNNSSAYNNRGISKSDLGLYKEAIKDFDKAIELNPNS 475

Query: 245 VEACTLFAQVLVDQEDFDGAEEYFNRSIRVDPENASLYVHRAMLMLQARGNVD---EAIK 301
            EA +       D   ++ A + +N++I ++P  +  Y +R      A+ N+    EA++
Sbjct: 476 SEAYSNRGNAKSDLNQYEEAIKDYNKAIELNPNYSEAYNNRG----NAKTNLSLYKEAVE 531

Query: 302 LIEKAISIDKSCMFAYETLGTIEVQRGRLEEAVKCFNKALPLARDEAE 349
              KAI ++ +    Y   GT +   G  EEA+K +N+++ L  + A+
Sbjct: 532 DYNKAIELNPNNSEVYNNRGTAKANLGNNEEAIKDYNRSIELNSNNAQ 579



 Score = 60.5 bits (145), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 61/236 (25%), Positives = 113/236 (47%), Gaps = 19/236 (8%)

Query: 298 EAIKLIEKAISIDKSCMFAYETLGTIEVQRGRLEEAVKCFNKALPLARDEAELSHIYSLR 357
           EAI+  +KAI ++ +   AY   G  ++  G+ +EA+K F+K++ L+++ +E    Y+ R
Sbjct: 358 EAIEDYDKAIELNPNDYMAYNNRGVAKMNLGQYKEAIKDFDKSIELSQNSSE---TYNNR 414

Query: 358 DAAIAQM----KVCERYNIKKKVSPRSQNITKNEKLAIKQL---RENNDIIIRPADKGGK 410
               A +    +  E Y+   +++P + +   N  ++   L   +E     I+  DK  +
Sbjct: 415 GNVKANLGLNKEAIEDYDKAIELNPNNSSAYNNRGISKSDLGLYKE----AIKDFDKAIE 470

Query: 411 TVVMDKADYTQKMTSILNSNDYEIIPGDPTKTIEESEKYGNLENESGQ-KHAASDFTKAF 469
                   Y+ +  +  + N YE    D  K IE +  Y    N  G  K   S + +A 
Sbjct: 471 LNPNSSEAYSNRGNAKSDLNQYEEAIKDYNKAIELNPNYSEAYNNRGNAKTNLSLYKEAV 530

Query: 470 ADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQRHF 525
            D ++A +++PN ++ Y  RG      G  EEA+++ +++I LN N     AQ +F
Sbjct: 531 EDYNKAIELNPNNSEVYNNRGTAKANLGNNEEAIKDYNRSIELNSN----NAQAYF 582



 Score = 58.9 bits (141), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 57/241 (23%), Positives = 101/241 (41%), Gaps = 49/241 (20%)

Query: 77  YLTAIRHCTEEIESTSSNHTKALARLLRATVYIFTSQSTKAIEDLTQLVEDTSVDPKIKV 136
           Y  AI+   + IE  S N ++      R  V      + +AIED  + +E    +     
Sbjct: 390 YKEAIKDFDKSIE-LSQNSSETYNN--RGNVKANLGLNKEAIEDYDKAIELNPNNSSAYN 446

Query: 137 NAHIKRAVVHLHAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDK 196
           N  I ++ + L     + +A  D D+A +++PN +++Y  RG       QYEEA+++ +K
Sbjct: 447 NRGISKSDLGL-----YKEAIKDFDKAIELNPNSSEAYSNRGNAKSDLNQYEEAIKDYNK 501

Query: 197 TIALNPNFHVARAQRHFVVHKMIVPGDRERVEQSLKEFRNFVDTHSNVVEACTLFAQVLV 256
            I LNPN+  A   R                               N     +L+ + + 
Sbjct: 502 AIELNPNYSEAYNNR------------------------------GNAKTNLSLYKEAVE 531

Query: 257 DQEDFDGAEEYFNRSIRVDPENASLYVHRAMLMLQARGNVDEAIKLIEKAISIDKSCMFA 316
           D          +N++I ++P N+ +Y +R        GN +EAIK   ++I ++ +   A
Sbjct: 532 D----------YNKAIELNPNNSEVYNNRGTAKANL-GNNEEAIKDYNRSIELNSNNAQA 580

Query: 317 Y 317
           Y
Sbjct: 581 Y 581



 Score = 48.5 bits (114), Expect = 0.009,   Method: Compositional matrix adjust.
 Identities = 41/134 (30%), Positives = 61/134 (45%), Gaps = 5/134 (3%)

Query: 391 IKQLRENNDIIIRPADKGGKTVVMDKADYTQKMTSILNSNDYEIIPGDPTKTIEESEKYG 450
           +KQ +E     I   DK  +    D   Y  +  + +N   Y+    D  K+IE S+   
Sbjct: 353 LKQYKE----AIEDYDKAIELNPNDYMAYNNRGVAKMNLGQYKEAIKDFDKSIELSQNSS 408

Query: 451 NLENESGQKHAASDFTK-AFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKT 509
              N  G   A     K A  D D+A +++PN + +Y  RG      G Y+EA+++ DK 
Sbjct: 409 ETYNNRGNVKANLGLNKEAIEDYDKAIELNPNNSSAYNNRGISKSDLGLYKEAIKDFDKA 468

Query: 510 IALNPNFHVARAQR 523
           I LNPN   A + R
Sbjct: 469 IELNPNSSEAYSNR 482


>gi|414078285|ref|YP_006997603.1| hypothetical protein ANA_C13102 [Anabaena sp. 90]
 gi|413971701|gb|AFW95790.1| TPR repeat-containing protein [Anabaena sp. 90]
          Length = 1342

 Score = 71.2 bits (173), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 95/433 (21%), Positives = 177/433 (40%), Gaps = 87/433 (20%)

Query: 153  FTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQRH 212
            + ++ A  D+A K++PN A ++  RG++     +Y EAL + DK I L+PN       R 
Sbjct: 588  YPESIAAYDKALKINPNFAQAWKDRGRLLFTLDKYSEALTSFDKAITLSPNQFDLYYWRG 647

Query: 213  FVVHKMI-VPGDRERVEQSLK-----------------EFRNFVDTHSNVVEACTL---- 250
            F +H +   P   E   QS+K                 E +N+    +++ +A  L    
Sbjct: 648  FTLHYLKRFPEAIEAYNQSIKINPLFKFAYNVRSFSYVELKNYRQAITDLTQAIQLDPKD 707

Query: 251  ----------------FAQVLVDQED------------------FDGAEEY------FNR 270
                            + Q + D                     ++G +EY      + +
Sbjct: 708  AVSYNFRGLLYGQLEEYKQSIADSTQAIQLDPKNAKYYNSRGIAYEGLKEYKQAINDYTQ 767

Query: 271  SIRVDPENASLYVHRAMLMLQARGNVDEAIKLIEKAISIDKSCMFAYETLGTIEVQRGRL 330
            +I++DP+NA  Y  R +   Q + +  + I    +AI +D      Y   G    +    
Sbjct: 768  AIQLDPKNAKYYNSRGIAYSQLK-DYKQVIADYTQAIQLDPKDATYYGMRGGAYSELKDY 826

Query: 331  EEAVKCFNKALPLARDEAELSHIYSLRDAAIAQMKVCERYNIKKKVSPRSQNI---TKNE 387
            ++A+  + +A+ L   +A     YSLR  A +++K     + K+ +S  ++ I    KN 
Sbjct: 827  KQAIADYTQAIQLDPKDAIY---YSLRGLAYSKLK-----DYKQAISDLTETIRRDPKNA 878

Query: 388  KLAIKQLR--ENNDIIIRPADKG---GKTVVMDKADYTQKMTSILNSNDYEIIPGDPTKT 442
               ++ LR  E  DI      KG   G T  M    Y  +        +Y++   D T+ 
Sbjct: 879  PYTMQGLRYSEFKDI------KGFLSGYTGFMSTV-YRTRGGIYYELKEYKLAIDDYTQA 931

Query: 443  IE-ESEKYGNLENESGQKHAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEE 501
            I+ +S+   +    +G  +   ++ +A  D ++  ++DP  A  Y  RG  Y    +Y++
Sbjct: 932  IKIDSQNANSYAIRAGIYYKLKEYKQAIDDYNQVIQIDPQNATYYGARGFAYFKLKEYKQ 991

Query: 502  ALRNLDKTIALNP 514
            A+ +  + I  +P
Sbjct: 992  AINDWSQVIKFDP 1004



 Score = 67.0 bits (162), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 80/373 (21%), Positives = 154/373 (41%), Gaps = 48/373 (12%)

Query: 146 HLHAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFH 205
            L  +  + +A   +++A    P+   ++Y +G I+    +Y E++   DK + +NPNF 
Sbjct: 547 QLWRSQKYAEARKAVNKAIAKKPDFYQAWYFKGVIFDSEKKYPESIAAYDKALKINPNFA 606

Query: 206 VARAQRHFVVHKMIVPGDRERVEQSLKEFRNFVDTHSNVVEACTLFAQVLVDQEDFDGAE 265
            A   R  ++  +      ++  ++L  F   +    N  +        L   + F  A 
Sbjct: 607 QAWKDRGRLLFTL------DKYSEALTSFDKAITLSPNQFDLYYWRGFTLHYLKRFPEAI 660

Query: 266 EYFNRSIRVDPENASLYVHRAMLMLQARGNVDEAIKLIEKAISIDKSCMFAYETLGTIEV 325
           E +N+SI+++P     Y  R+   ++ + N  +AI  + +AI +D     +Y   G +  
Sbjct: 661 EAYNQSIKINPLFKFAYNVRSFSYVELK-NYRQAITDLTQAIQLDPKDAVSYNFRGLL-- 717

Query: 326 QRGRLEEAVKCFNKALPLARDEAELSHIYSLRDAAIAQMK----VCERYNIKKKVSPRSQ 381
             G+LEE  +    +    + + + +  Y+ R  A   +K        Y    ++ P++ 
Sbjct: 718 -YGQLEEYKQSIADSTQAIQLDPKNAKYYNSRGIAYEGLKEYKQAINDYTQAIQLDPKNA 776

Query: 382 NITKNEKLAIKQLRENNDIIIRPADKGGKTVVMDKADYTQKMTSILNSNDYEIIPGDPTK 441
               +  +A  QL++   +I               ADYTQ +         ++ P D T 
Sbjct: 777 KYYNSRGIAYSQLKDYKQVI---------------ADYTQAI---------QLDPKDATY 812

Query: 442 TIEESEKYGNLENESGQKHAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEE 501
                  Y  L+          D+ +A AD  +A ++DP  A  Y  RG  Y     Y++
Sbjct: 813 YGMRGGAYSELK----------DYKQAIADYTQAIQLDPKDAIYYSLRGLAYSKLKDYKQ 862

Query: 502 ALRNLDKTIALNP 514
           A+ +L +TI  +P
Sbjct: 863 AISDLTETIRRDP 875



 Score = 65.5 bits (158), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 102/500 (20%), Positives = 197/500 (39%), Gaps = 71/500 (14%)

Query: 75   EDYLTAIRHCTEEIESTSSNHTKALARLLRATVYIFTSQSTKAIEDLTQLVEDTSVDPKI 134
            ++Y  AI   T+ I+    N   A     R   Y       + I D TQ ++   +DPK 
Sbjct: 756  KEYKQAINDYTQAIQLDPKN---AKYYNSRGIAYSQLKDYKQVIADYTQAIQ---LDPKD 809

Query: 135  KVNAHIKRAVVHLHAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNL 194
                 ++          D+ +A AD  +A ++DP  A  Y  RG  Y     Y++A+ +L
Sbjct: 810  ATYYGMRGGA--YSELKDYKQAIADYTQAIQLDPKDAIYYSLRGLAYSKLKDYKQAISDL 867

Query: 195  DKTIALNPNF--HVARAQRH--FVVHKMIVPG----------DRERVEQSLKEFRNFVDT 240
             +TI  +P    +  +  R+  F   K  + G           R  +   LKE++  +D 
Sbjct: 868  TETIRRDPKNAPYTMQGLRYSEFKDIKGFLSGYTGFMSTVYRTRGGIYYELKEYKLAIDD 927

Query: 241  HSNVVE-------ACTLFAQVLVDQEDFDGAEEYFNRSIRVDPENASLYVHRAMLMLQAR 293
            ++  ++       +  + A +    +++  A + +N+ I++DP+NA+ Y  R     + +
Sbjct: 928  YTQAIKIDSQNANSYAIRAGIYYKLKEYKQAIDDYNQVIQIDPQNATYYGARGFAYFKLK 987

Query: 294  GNVDEAIKLIEKAISIDKSCMFAYETLGTIEVQRGRLEEAVKCFNKALPLARDEAE---- 349
                +AI    + I  D      Y   G   +      +A+  + +A+ +    A     
Sbjct: 988  -EYKQAINDWSQVIKFDPKDATYYGLRGNTYLLSKEYRQAINDYTQAIKIDPKNANYYSG 1046

Query: 350  --LSH-----------------------IYSLRDAAIAQMK----VCERYNIKKKVSPRS 380
              ++H                       I +LR AA  Q+K      + YN   ++ P++
Sbjct: 1047 RGIAHHFLEDYKQAIDNYTEAIKIDPKKIINLRGAAYLQLKEYKLAIDDYNQAIQLDPKN 1106

Query: 381  QNITKNEKLAIKQLRENNDIIIRPADKGGKTVVMDKAD---YTQKMTSILNSNDYEIIPG 437
                     A  QL++    I    +     + +D  +   Y  +  + L   DY++   
Sbjct: 1107 AIYYGTRGDAYLQLKDYKQAI----NDYTHAIQLDPKNAIYYGTRGFAYLQLKDYKLAIN 1162

Query: 438  DPTKTIEESEKYGNLENESGQKH-AASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLF 496
            D T+ I+   K     +  G  +    D  +A  D  +A K+ P+  ++YY RG  +   
Sbjct: 1163 DYTQAIKIDPKNATYYSARGDAYFQLKDHKQAIDDYTQAIKLKPDFTEAYYVRGIAHYFL 1222

Query: 497  GQYEEALRNLDKTIALNPNF 516
              Y++A+ + ++ I L P++
Sbjct: 1223 KDYKQAIDDWNQAIKLKPDY 1242



 Score = 55.5 bits (132), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 62/269 (23%), Positives = 112/269 (41%), Gaps = 26/269 (9%)

Query: 19   FFKPSKQFIKTYLKSFPNDP--ILQPDGLS----NGVELTNGDTNESHELD------LLS 66
            F +  KQ I  Y ++   DP  I+   G +       +L   D N++ +LD        +
Sbjct: 1053 FLEDYKQAIDNYTEAIKIDPKKIINLRGAAYLQLKEYKLAIDDYNQAIQLDPKNAIYYGT 1112

Query: 67   KAKRAFEHEDYLTAIRHCTEEIESTSSNHTKALARLLRATVYIFTSQSTKAIEDLTQLVE 126
            +     + +DY  AI   T  I+    N   A+    R   Y+       AI D TQ ++
Sbjct: 1113 RGDAYLQLKDYKQAINDYTHAIQLDPKN---AIYYGTRGFAYLQLKDYKLAINDYTQAIK 1169

Query: 127  DTSVDPKIKVNAHIKRAVVHLHAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQ 186
               +DPK     +  R   +     D  +A  D  +A K+ P+  ++YY RG  +     
Sbjct: 1170 ---IDPK-NATYYSARGDAYFQL-KDHKQAIDDYTQAIKLKPDFTEAYYVRGIAHYFLKD 1224

Query: 187  YEEALRNLDKTIALNPNFHVARAQRHFVVHKMIVPGDRERVEQSLKEFRNFVDTHSNVVE 246
            Y++A+ + ++ I L P++  A      V ++M        VE ++  +RN +  +SN  E
Sbjct: 1225 YKQAIDDWNQAIKLKPDYPEAYTNLGIVSYEM------GEVETAINYWRNAIKINSNFAE 1278

Query: 247  ACTLFAQVLVDQEDFDGAEEYFNRSIRVD 275
            A       L  + D +   +    ++++D
Sbjct: 1279 AHLALGVALYGKGDQEAGLKSAETALKLD 1307



 Score = 53.9 bits (128), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 96/429 (22%), Positives = 170/429 (39%), Gaps = 44/429 (10%)

Query: 112 SQSTKAIEDLTQLVEDTSVDPKIKVNAHIKRAVVHLHAASDFTKAFADLDEAEKVDPNVA 171
           S S   I     LVE   +D  +KV   +  A +        ++    LD+  K   N  
Sbjct: 481 SSSGIPIRTFLNLVEQGGIDSDLKVETTVP-ATLKKSEEDVISEYLLPLDQVPKNSDNEI 539

Query: 172 DSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQRHFVVHKMIVPGDRERVEQSL 231
                  Q++    +Y EA + ++K IA  P+F+ A    +F   K ++    ++  +S+
Sbjct: 540 SWLNYANQLWRS-QKYAEARKAVNKAIAKKPDFYQAW---YF---KGVIFDSEKKYPESI 592

Query: 232 KEFRNFVDTHSNVVEACTLFAQVLVDQEDFDGAEEYFNRSIRVDPENASLYVHRAMLMLQ 291
             +   +  + N  +A     ++L   + +  A   F+++I + P    LY  R    L 
Sbjct: 593 AAYDKALKINPNFAQAWKDRGRLLFTLDKYSEALTSFDKAITLSPNQFDLYYWRG-FTLH 651

Query: 292 ARGNVDEAIKLIEKAISIDKSCMFAYETLGTIEVQRGRLEEAVKCFNKALPLARDEAELS 351
                 EAI+   ++I I+    FAY       V+     +A+    +A+ L   +A   
Sbjct: 652 YLKRFPEAIEAYNQSIKINPLFKFAYNVRSFSYVELKNYRQAITDLTQAIQLDPKDAVS- 710

Query: 352 HIYSLRDAAIAQMKVCERYNIKKKVSPRSQNITKNEKLAIKQLRENNDIIIRPADKGGKT 411
             Y+ R     Q+   E Y  K+ ++  +Q I    +L  K  +  N   I  A +G K 
Sbjct: 711 --YNFRGLLYGQL---EEY--KQSIADSTQAI----QLDPKNAKYYNSRGI--AYEGLK- 756

Query: 412 VVMDKADYTQKMTSILNSNDYEIIPGDPTKTIEESEKYGNLENESGQKHAA-SDFTKAFA 470
                 +Y Q +      NDY       T+ I+   K     N  G  ++   D+ +  A
Sbjct: 757 ------EYKQAI------NDY-------TQAIQLDPKNAKYYNSRGIAYSQLKDYKQVIA 797

Query: 471 DLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQRHFVWTST 530
           D  +A ++DP  A  Y  RG  Y     Y++A+ +  + I L+P   +  + R   ++  
Sbjct: 798 DYTQAIQLDPKDATYYGMRGGAYSELKDYKQAIADYTQAIQLDPKDAIYYSLRGLAYSKL 857

Query: 531 LAELMAFSD 539
                A SD
Sbjct: 858 KDYKQAISD 866


>gi|298492639|ref|YP_003722816.1| hypothetical protein Aazo_4355 ['Nostoc azollae' 0708]
 gi|298234557|gb|ADI65693.1| TPR repeat-containing protein ['Nostoc azollae' 0708]
          Length = 1192

 Score = 71.2 bits (173), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 45/194 (23%), Positives = 90/194 (46%), Gaps = 7/194 (3%)

Query: 153 FTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQRH 212
           F +A A  D+A  + P+   ++Y RG I   FG ++ A+ + DK I L PN+  A + R 
Sbjct: 353 FEEAIAAYDQAIALKPDFFKAWYNRGGIMVEFGDFDGAITSFDKAIELQPNYQEAWSSRG 412

Query: 213 FVVHKMIVPGDRERVEQSLKEFRNFVDTHSNVVEACTLFAQVLVDQEDFDGAEEYFNRSI 272
             + K+ +      + +++  +   ++      E        L   E ++ A   +N++I
Sbjct: 413 LALLKLGL------IWEAISSYDQALELQRQDQETWYYRGVALAVGEQYEDAIASYNQAI 466

Query: 273 RVDPENASLYVHRAMLMLQARGNVDEAIKLIEKAISIDKSCMFAYETLGTIEVQRGRLEE 332
            + P+   +++ R +++   +    EAI+  ++A+SI      A+   G       R EE
Sbjct: 467 EIQPDYHEVWIDRGVVLFNLK-RWSEAIESWDQALSIQPDFYLAWYNRGIALENLARREE 525

Query: 333 AVKCFNKALPLARD 346
           A+  + KA+ +  D
Sbjct: 526 AITSYQKAITIKPD 539



 Score = 49.7 bits (117), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 41/201 (20%), Positives = 81/201 (40%), Gaps = 41/201 (20%)

Query: 150 ASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARA 209
           + D   A A  ++A K++P  A+ ++ +        ++EEA+   D+ IAL P+F  A  
Sbjct: 316 SGDLLGALAFYNQATKLEPESAEYWFNQALTLFHLKRFEEAIAAYDQAIALKPDFFKAWY 375

Query: 210 QRHFVVHKMIVPGDRERVEQSLKEFRNFVDTHSNVVEACTLFAQVLVDQEDFDGAEEYFN 269
            R                                          ++V+  DFDGA   F+
Sbjct: 376 NR----------------------------------------GGIMVEFGDFDGAITSFD 395

Query: 270 RSIRVDPENASLYVHRAMLMLQARGNVDEAIKLIEKAISIDKSCMFAYETLGTIEVQRGR 329
           ++I + P     +  R + +L+  G + EAI   ++A+ + +     +   G       +
Sbjct: 396 KAIELQPNYQEAWSSRGLALLKL-GLIWEAISSYDQALELQRQDQETWYYRGVALAVGEQ 454

Query: 330 LEEAVKCFNKALPLARDEAEL 350
            E+A+  +N+A+ +  D  E+
Sbjct: 455 YEDAIASYNQAIEIQPDYHEV 475



 Score = 46.2 bits (108), Expect = 0.047,   Method: Compositional matrix adjust.
 Identities = 21/59 (35%), Positives = 33/59 (55%)

Query: 465 FTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQR 523
           F +A A  D+A  + P+   ++Y RG I   FG ++ A+ + DK I L PN+  A + R
Sbjct: 353 FEEAIAAYDQAIALKPDFFKAWYNRGGIMVEFGDFDGAITSFDKAIELQPNYQEAWSSR 411


>gi|23500690|ref|NP_700130.1| TPR domain-containing protein [Brucella suis 1330]
 gi|62317211|ref|YP_223064.1| hypothetical protein BruAb2_0269 [Brucella abortus bv. 1 str.
           9-941]
 gi|83269193|ref|YP_418484.1| hypothetical protein BAB2_0271 [Brucella melitensis biovar Abortus
           2308]
 gi|161621016|ref|YP_001594902.1| hypothetical protein BCAN_B0985 [Brucella canis ATCC 23365]
 gi|163845077|ref|YP_001622732.1| hypothetical protein BSUIS_B0956 [Brucella suis ATCC 23445]
 gi|225686724|ref|YP_002734696.1| TPR repeat-containing protein [Brucella melitensis ATCC 23457]
 gi|256015725|ref|YP_003105734.1| TPR domain-containing protein [Brucella microti CCM 4915]
 gi|256262142|ref|ZP_05464674.1| RNA-binding region RNP-1 [Brucella melitensis bv. 2 str. 63/9]
 gi|260544449|ref|ZP_05820270.1| RNA-binding region RNP-1 protein [Brucella abortus NCTC 8038]
 gi|260565013|ref|ZP_05835498.1| RNA-binding region RNP-1 protein [Brucella melitensis bv. 1 str.
           16M]
 gi|260567784|ref|ZP_05838253.1| RNA-binding region RNP-1 protein [Brucella suis bv. 4 str. 40]
 gi|260756289|ref|ZP_05868637.1| TPR repeat-containing protein [Brucella abortus bv. 6 str. 870]
 gi|260759716|ref|ZP_05872064.1| TPR repeat-containing protein [Brucella abortus bv. 4 str. 292]
 gi|260762956|ref|ZP_05875288.1| TPR repeat-containing protein [Brucella abortus bv. 2 str. 86/8/59]
 gi|260882112|ref|ZP_05893726.1| TPR repeat-containing protein [Brucella abortus bv. 9 str. C68]
 gi|261217555|ref|ZP_05931836.1| TPR repeat-containing protein [Brucella ceti M13/05/1]
 gi|261320430|ref|ZP_05959627.1| TPR repeat-containing protein [Brucella ceti M644/93/1]
 gi|261750658|ref|ZP_05994367.1| TPR repeat-containing protein [Brucella suis bv. 5 str. 513]
 gi|261753914|ref|ZP_05997623.1| TPR repeat-containing protein [Brucella suis bv. 3 str. 686]
 gi|265990258|ref|ZP_06102815.1| TPR repeat-containing protein [Brucella melitensis bv. 1 str.
           Rev.1]
 gi|265992636|ref|ZP_06105193.1| TPR repeat-containing protein [Brucella melitensis bv. 3 str.
           Ether]
 gi|297249260|ref|ZP_06932961.1| hypothetical protein BAYG_02006 [Brucella abortus bv. 5 str. B3196]
 gi|376278911|ref|YP_005108944.1| TPR domain-containing protein [Brucella suis VBI22]
 gi|384223472|ref|YP_005614637.1| hypothetical protein BS1330_II0956 [Brucella suis 1330]
 gi|423168901|ref|ZP_17155603.1| hypothetical protein M17_02590 [Brucella abortus bv. 1 str. NI435a]
 gi|423171666|ref|ZP_17158340.1| hypothetical protein M19_02198 [Brucella abortus bv. 1 str. NI474]
 gi|423174604|ref|ZP_17161274.1| hypothetical protein M1A_02001 [Brucella abortus bv. 1 str. NI486]
 gi|423176481|ref|ZP_17163147.1| hypothetical protein M1E_00743 [Brucella abortus bv. 1 str. NI488]
 gi|423181095|ref|ZP_17167735.1| hypothetical protein M1G_02194 [Brucella abortus bv. 1 str. NI010]
 gi|423184228|ref|ZP_17170864.1| hypothetical protein M1I_02196 [Brucella abortus bv. 1 str. NI016]
 gi|423187377|ref|ZP_17173990.1| hypothetical protein M1K_02194 [Brucella abortus bv. 1 str. NI021]
 gi|423189799|ref|ZP_17176408.1| hypothetical protein M1M_01480 [Brucella abortus bv. 1 str. NI259]
 gi|23464339|gb|AAN34135.1| TPR domain protein [Brucella suis 1330]
 gi|62197404|gb|AAX75703.1| TPR domain protein [Brucella abortus bv. 1 str. 9-941]
 gi|82939467|emb|CAJ12437.1| RNA-binding region RNP-1 (RNA recognition motif):TPR repeat
           [Brucella melitensis biovar Abortus 2308]
 gi|161337827|gb|ABX64131.1| TPR repeat-containing protein [Brucella canis ATCC 23365]
 gi|163675800|gb|ABY39910.1| Hypothetical protein, conserved [Brucella suis ATCC 23445]
 gi|225642829|gb|ACO02742.1| TPR repeat-containing protein [Brucella melitensis ATCC 23457]
 gi|255998385|gb|ACU50072.1| TPR domain protein [Brucella microti CCM 4915]
 gi|260097720|gb|EEW81594.1| RNA-binding region RNP-1 protein [Brucella abortus NCTC 8038]
 gi|260152656|gb|EEW87749.1| RNA-binding region RNP-1 protein [Brucella melitensis bv. 1 str.
           16M]
 gi|260154449|gb|EEW89530.1| RNA-binding region RNP-1 protein [Brucella suis bv. 4 str. 40]
 gi|260670034|gb|EEX56974.1| TPR repeat-containing protein [Brucella abortus bv. 4 str. 292]
 gi|260673377|gb|EEX60198.1| TPR repeat-containing protein [Brucella abortus bv. 2 str. 86/8/59]
 gi|260676397|gb|EEX63218.1| TPR repeat-containing protein [Brucella abortus bv. 6 str. 870]
 gi|260871640|gb|EEX78709.1| TPR repeat-containing protein [Brucella abortus bv. 9 str. C68]
 gi|260922644|gb|EEX89212.1| TPR repeat-containing protein [Brucella ceti M13/05/1]
 gi|261293120|gb|EEX96616.1| TPR repeat-containing protein [Brucella ceti M644/93/1]
 gi|261740411|gb|EEY28337.1| TPR repeat-containing protein [Brucella suis bv. 5 str. 513]
 gi|261743667|gb|EEY31593.1| TPR repeat-containing protein [Brucella suis bv. 3 str. 686]
 gi|262763506|gb|EEZ09538.1| TPR repeat-containing protein [Brucella melitensis bv. 3 str.
           Ether]
 gi|263000927|gb|EEZ13617.1| TPR repeat-containing protein [Brucella melitensis bv. 1 str.
           Rev.1]
 gi|263091843|gb|EEZ16165.1| RNA-binding region RNP-1 [Brucella melitensis bv. 2 str. 63/9]
 gi|297173129|gb|EFH32493.1| hypothetical protein BAYG_02006 [Brucella abortus bv. 5 str. B3196]
 gi|343384920|gb|AEM20411.1| TPR domain-containing protein [Brucella suis 1330]
 gi|358260349|gb|AEU08082.1| TPR domain-containing protein [Brucella suis VBI22]
 gi|374536088|gb|EHR07608.1| hypothetical protein M19_02198 [Brucella abortus bv. 1 str. NI474]
 gi|374538107|gb|EHR09617.1| hypothetical protein M17_02590 [Brucella abortus bv. 1 str. NI435a]
 gi|374539173|gb|EHR10679.1| hypothetical protein M1A_02001 [Brucella abortus bv. 1 str. NI486]
 gi|374545685|gb|EHR17145.1| hypothetical protein M1G_02194 [Brucella abortus bv. 1 str. NI010]
 gi|374546528|gb|EHR17987.1| hypothetical protein M1I_02196 [Brucella abortus bv. 1 str. NI016]
 gi|374553496|gb|EHR24911.1| hypothetical protein M1E_00743 [Brucella abortus bv. 1 str. NI488]
 gi|374555181|gb|EHR26590.1| hypothetical protein M1K_02194 [Brucella abortus bv. 1 str. NI021]
 gi|374555839|gb|EHR27244.1| hypothetical protein M1M_01480 [Brucella abortus bv. 1 str. NI259]
          Length = 295

 Score = 71.2 bits (173), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 55/183 (30%), Positives = 87/183 (47%), Gaps = 7/183 (3%)

Query: 167 DPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQRHFVVHKMIVPGDRER 226
           +P   + Y  RG  Y   G+Y+EA+R+ D+ IALNPNF+ A A R  V   M   GD  +
Sbjct: 76  NPRDPEGYNVRGSAYGKAGRYKEAMRDFDQAIALNPNFYQAYANRALVDRYM---GDNNK 132

Query: 227 VEQSLKEFRNFVDTHSNVVEACTLFAQVLVDQEDFDGAEEYFNRSIRVDPENASLYVHRA 286
              +++++   +  +     A      V       D A   FN++I +   +   Y +R 
Sbjct: 133 ---AVQDYSRAIQLNPQYDAAYIGRGNVYRQAGHLDQALNDFNQAIALRTTDGRAYHNRG 189

Query: 287 MLMLQARGNVDEAIKLIEKAISIDKSCMFAYETLGTIEVQRGRLEEAVKCFNKALPLARD 346
            L+ QA+G   +AI+   KAIS++ +    Y   G   V  G  + A   FN A+ L ++
Sbjct: 190 -LIYQAKGLHKQAIEDFSKAISLNSTAPEPYNGRGISYVALGDYDNAFDDFNTAITLDQN 248

Query: 347 EAE 349
            AE
Sbjct: 249 VAE 251



 Score = 48.5 bits (114), Expect = 0.008,   Method: Compositional matrix adjust.
 Identities = 47/208 (22%), Positives = 92/208 (44%), Gaps = 12/208 (5%)

Query: 103 LRATVYIFTSQSTKAIEDLTQLVEDTSVDPKIKVNAHIKRAVVHLHAASDFTKAFADLDE 162
           +R + Y    +  +A+ D  Q +   +++P     A+  RA+V  +   D  KA  D   
Sbjct: 85  VRGSAYGKAGRYKEAMRDFDQAI---ALNPNF-YQAYANRALVDRYMG-DNNKAVQDYSR 139

Query: 163 AEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQRHFVVHKMIVPG 222
           A +++P    +Y  RG +Y   G  ++AL + ++ IAL      A   R  +     +  
Sbjct: 140 AIQLNPQYDAAYIGRGNVYRQAGHLDQALNDFNQAIALRTTDGRAYHNRGLIYQAKGLH- 198

Query: 223 DRERVEQSLKEFRNFVDTHSNVVEACTLFAQVLVDQEDFDGAEEYFNRSIRVDPENASLY 282
                +Q++++F   +  +S   E         V   D+D A + FN +I +D   A  +
Sbjct: 199 -----KQAIEDFSKAISLNSTAPEPYNGRGISYVALGDYDNAFDDFNTAITLDQNVAESW 253

Query: 283 VHRAMLMLQARGNVDEAIKLIEKAISID 310
            ++A L+ +  G+  +A     +A+ +D
Sbjct: 254 ANQA-LVYEHNGDKAKAANSYARAVQLD 280



 Score = 48.1 bits (113), Expect = 0.011,   Method: Compositional matrix adjust.
 Identities = 22/48 (45%), Positives = 30/48 (62%)

Query: 479 DPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQRHFV 526
           +P   + Y  RG  Y   G+Y+EA+R+ D+ IALNPNF+ A A R  V
Sbjct: 76  NPRDPEGYNVRGSAYGKAGRYKEAMRDFDQAIALNPNFYQAYANRALV 123



 Score = 38.5 bits (88), Expect = 8.1,   Method: Compositional matrix adjust.
 Identities = 26/105 (24%), Positives = 50/105 (47%), Gaps = 5/105 (4%)

Query: 104 RATVYIFTSQSTKAIEDLTQLVEDTSVDPKIKVNAHIKRAVVHLHAASDFTKAFADLDEA 163
           R  +Y       +AIED ++ +   S  P+     +  R + ++ A  D+  AF D + A
Sbjct: 188 RGLIYQAKGLHKQAIEDFSKAISLNSTAPE----PYNGRGISYV-ALGDYDNAFDDFNTA 242

Query: 164 EKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVAR 208
             +D NVA+S+  +  +Y   G   +A  +  + + L+P +  A+
Sbjct: 243 ITLDQNVAESWANQALVYEHNGDKAKAANSYARAVQLDPKYKPAK 287


>gi|300870997|ref|YP_003785868.1| hypothetical protein BP951000_1381 [Brachyspira pilosicoli 95/1000]
 gi|300688696|gb|ADK31367.1| TPR domain-containing protein [Brachyspira pilosicoli 95/1000]
          Length = 790

 Score = 71.2 bits (173), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 63/289 (21%), Positives = 128/289 (44%), Gaps = 18/289 (6%)

Query: 80  AIRHCTEEIESTSSNHTKALARLLRATVYIFTSQSTKAIEDLTQLVEDTSVDPKIKVNAH 139
           AI  C E IE  + +     A    A          ++I+   +++E    + K   N  
Sbjct: 21  AINLCNESIEKDNKDED---AYFYIAICKFDLKNYEESIKYFNKVIELNPNNEKAYFNRG 77

Query: 140 IKRAVVHLHAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIA 199
           + +A + ++  S       D D + K++PN+ ++Y ++  +     +YE+A+ NL+K I 
Sbjct: 78  LSKAYLQIYEES-----LKDFDISIKLNPNIDNTYLEKSNVLLDINKYEDAIENLNKAIT 132

Query: 200 LNPNFHVARAQRHFVVHKMIVPGDRERVEQSLKEFRNFVDTHSNVVEACTLFAQVLVDQE 259
           LN N   A   R       I   +  R E ++ ++   ++ +SN  E          +  
Sbjct: 133 LNQNNSYAYFNRG------IAKSNLGRYEDAIDDYNRAIELNSNNEEIYVDIGIAKSNLG 186

Query: 260 DFDGAEEYFNRSIRVDPENASLYVHRAMLMLQARGNVDEAIKLIEKAISIDKSCMFAYET 319
            ++ + EY+N++I+++P N+  Y++R  +     G  + +I    K+I +  +   +Y  
Sbjct: 187 KYEESIEYYNKAIKLNPNNSDAYLNRG-ISKGYLGKYESSINDFNKSIELTPNDENSYFN 245

Query: 320 LGTIEVQRGRLEEAVKCFNKALPLARDEAELSHIYSLRDAAIAQMKVCE 368
            G  +    R EE++  +NK + L  +    S  Y  R A+   +++ E
Sbjct: 246 RGISKAYLRRYEESINDYNKVIELNSNN---SDAYLNRGASKFNLEIYE 291



 Score = 62.8 bits (151), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 77/347 (22%), Positives = 145/347 (41%), Gaps = 44/347 (12%)

Query: 182 CLFG--QYEEALRNLDKTIALNPNFHVARAQRHFVVHKMIVPGDRERVEQSLKEFRNFVD 239
           C F    YEE+++  +K I LNPN   A   R      + +       E+SLK+F   + 
Sbjct: 45  CKFDLKNYEESIKYFNKVIELNPNNEKAYFNRGLSKAYLQI------YEESLKDFDISIK 98

Query: 240 THSNVVEACTLFAQVLVDQEDFDGAEEYFNRSIRVDPENASLYVHRAMLMLQARGNVDEA 299
            + N+       + VL+D   ++ A E  N++I ++  N+  Y +R +      G  ++A
Sbjct: 99  LNPNIDNTYLEKSNVLLDINKYEDAIENLNKAITLNQNNSYAYFNRGIAK-SNLGRYEDA 157

Query: 300 IKLIEKAISIDKSCMFAYETLGTIEVQRGRLEEAVKCFNKALPLARDEAELSHIYSLRDA 359
           I    +AI ++ +    Y  +G  +   G+ EE+++ +NKA+ L  + ++      +   
Sbjct: 158 IDDYNRAIELNSNNEEIYVDIGIAKSNLGKYEESIEYYNKAIKLNPNNSDAYLNRGISKG 217

Query: 360 AIAQMKVC-ERYNIKKKVSPRSQNITKNEKLAIKQLRENNDIIIRPADKGGKTVVMDKAD 418
            + + +     +N   +++P  +N   N  ++   LR   + I                D
Sbjct: 218 YLGKYESSINDFNKSIELTPNDENSYFNRGISKAYLRRYEESI---------------ND 262

Query: 419 YTQKMTSILNSNDYEIIPGDPTKTIEESEKYGNLENESGQKHAASDFTKAFADLDEAEKV 478
           Y + +   LNSN+              S+ Y N       K     + +A  D ++  ++
Sbjct: 263 YNKVIE--LNSNN--------------SDAYLN---RGASKFNLEIYEEAIKDFNKVIEL 303

Query: 479 DPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQRHF 525
           +PN  D Y+  G       +Y +A+ N +K I LN N   +   R F
Sbjct: 304 NPNANDVYFNLGISNFNLKKYVDAIENFNKAIELNSNNEESYFFRGF 350



 Score = 43.5 bits (101), Expect = 0.27,   Method: Compositional matrix adjust.
 Identities = 53/241 (21%), Positives = 106/241 (43%), Gaps = 15/241 (6%)

Query: 283 VHRAMLMLQARGNVDEAIKLIEKAISIDKSCMFAYETLGTIEVQRGRLEEAVKCFNKALP 342
           +   +L L    +++EAI L  ++I  D     AY  +   +      EE++K FNK + 
Sbjct: 5   LKNKILNLIEEKHIEEAINLCNESIEKDNKDEDAYFYIAICKFDLKNYEESIKYFNKVIE 64

Query: 343 LARDEAELSHIYSLRDAAIAQMKVCER----YNIKKKVSPRSQNITKNEKLAIKQLRENN 398
           L  +  +    Y  R  + A +++ E     ++I  K++P   N    +   +  + +  
Sbjct: 65  LNPNNEKA---YFNRGLSKAYLQIYEESLKDFDISIKLNPNIDNTYLEKSNVLLDINKYE 121

Query: 399 DIIIRPADKGGKTVVMDKAD---YTQKMTSILNSNDYEIIPGDPTKTIEESEKYGNLENE 455
           D I    +   K + +++ +   Y  +  +  N   YE    D  + IE +     +  +
Sbjct: 122 DAI----ENLNKAITLNQNNSYAYFNRGIAKSNLGRYEDAIDDYNRAIELNSNNEEIYVD 177

Query: 456 SG-QKHAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNP 514
            G  K     + ++    ++A K++PN +D+Y  RG      G+YE ++ + +K+I L P
Sbjct: 178 IGIAKSNLGKYEESIEYYNKAIKLNPNNSDAYLNRGISKGYLGKYESSINDFNKSIELTP 237

Query: 515 N 515
           N
Sbjct: 238 N 238


>gi|428212529|ref|YP_007085673.1| hypothetical protein Oscil6304_2088 [Oscillatoria acuminata PCC
           6304]
 gi|428000910|gb|AFY81753.1| TPR repeat-containing protein [Oscillatoria acuminata PCC 6304]
          Length = 1049

 Score = 70.9 bits (172), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 80/344 (23%), Positives = 140/344 (40%), Gaps = 48/344 (13%)

Query: 151 SDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQ 210
            D   A  D ++A K++P   ++YY RG      G ++  + +  K I LNP +  A   
Sbjct: 694 GDVQGAIDDFNQAIKINPQNTNAYYNRGNARKESGDWQGVIADYTKAIDLNPQYADAYNN 753

Query: 211 RHFVVHKMIVPGDRERVEQSLKEFRNFVDTHSNVVEACTLFAQVLVDQEDFDGAEEYFNR 270
           R  V  K     D   +  ++ ++   ++ +     A         D  D  GA + +N+
Sbjct: 754 RG-VARK-----DSGDLSGAIADYTKAIELNPLYAGAYYNRGYARKDSGDLSGAIDDYNQ 807

Query: 271 SIRVDPENASLYVHRAMLMLQARGNVDEAIKLIEKAISIDKSCMFAYETLGTIEVQRGRL 330
           +I+++P++A  YV R +    + G++  AI    + I I+     AY   G      G L
Sbjct: 808 AIKINPQDAEAYVRRGIARAHS-GDLPGAISDFTETIKINPQYALAYNNRGNARKDSGDL 866

Query: 331 EEAVKCFNKALPLARDEAELSHIYSLRDAAIAQMKVCERYNIKKKVSPRSQNITKNEKLA 390
             A+  +N+A+ +                     ++   YN +      S +++     A
Sbjct: 867 AGAIDDYNQAIKI-------------------NPQLALAYNNRGNARRNSGDLSG----A 903

Query: 391 IKQLRENNDIIIRPADKGGKTVVMDKADYTQKMTSILNSNDYEIIPG---DPTKTIEESE 447
           I    E   I  + AD          A Y + + S +     E +PG   D T+ I+ + 
Sbjct: 904 ISDFTEAIKINPQYAD----------AYYNRGVASSI----LEDMPGAISDFTEAIKINP 949

Query: 448 KYGNLENESGQKHAAS-DFTKAFADLDEAEKVDPNVADSYYQRG 490
           +Y +     G   + S D   A +D  EA K++P  AD+YY RG
Sbjct: 950 QYADAYLNRGIVSSMSEDMPGAISDFTEAIKINPQYADAYYNRG 993



 Score = 63.2 bits (152), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 88/408 (21%), Positives = 171/408 (41%), Gaps = 37/408 (9%)

Query: 147 LHAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHV 206
           L AA    +A    ++A  +D    +++ ++G+      QY +AL ++D+ I        
Sbjct: 589 LSAADRDREAVWSFEQAIVIDNTPHEAWREQGKSLLFLKQYPQALASIDQAIQ------- 641

Query: 207 ARAQRHFVVHKMIVPGDRERVEQSLKEFRNFVDTHSNVVE------ACTLFAQVLVDQED 260
            R  +  V++       R  +  +L  ++  V  ++  ++      A      +  D  D
Sbjct: 642 -RQNQDAVLYMF-----RAGILSALNRYQEAVAAYTIAIDITPHSWAYNNRGAIRKDLGD 695

Query: 261 FDGAEEYFNRSIRVDPENASLYVHRAMLMLQARGNVDEAIKLIEKAISIDKSCMFAYETL 320
             GA + FN++I+++P+N + Y +R     ++ G+    I    KAI ++     AY   
Sbjct: 696 VQGAIDDFNQAIKINPQNTNAYYNRGNARKES-GDWQGVIADYTKAIDLNPQYADAYNNR 754

Query: 321 GTIEVQRGRLEEAVKCFNKAL---PLARDEAELSHIYSLRDAAIAQMKVCERYNIKKKVS 377
           G      G L  A+  + KA+   PL    A  +  Y+ +D+      + + YN   K++
Sbjct: 755 GVARKDSGDLSGAIADYTKAIELNPLYAG-AYYNRGYARKDSGDLSGAI-DDYNQAIKIN 812

Query: 378 PRSQNITKNEKLAIKQLRENNDIIIRPADKGGKTVVMDKA---DYTQKMTSILNSNDYEI 434
           P+         +A    R ++  +        +T+ ++      Y  +  +  +S D   
Sbjct: 813 PQDAEAYVRRGIA----RAHSGDLPGAISDFTETIKINPQYALAYNNRGNARKDSGDLAG 868

Query: 435 IPGDPTKTIEESEKYGNLENESGQ-KHAASDFTKAFADLDEAEKVDPNVADSYYQRGQIY 493
              D  + I+ + +     N  G  +  + D + A +D  EA K++P  AD+YY RG   
Sbjct: 869 AIDDYNQAIKINPQLALAYNNRGNARRNSGDLSGAISDFTEAIKINPQYADAYYNRGVAS 928

Query: 494 CLFGQYEEALRNLDKTIALNPNFHVARAQRHFVWTSTLAELM--AFSD 539
            +      A+ +  + I +NP +  A   R  V  S+++E M  A SD
Sbjct: 929 SILEDMPGAISDFTEAIKINPQYADAYLNRGIV--SSMSEDMPGAISD 974



 Score = 57.0 bits (136), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 87/378 (23%), Positives = 151/378 (39%), Gaps = 52/378 (13%)

Query: 153 FTKAFADLDEAEKVDPN---VADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARA 209
           F    A L   +K  P     A  +   G      G+ E+A+   ++ I LN N + A  
Sbjct: 524 FVDMIAALAVTQKTAPKQDATARDWINYGNQLWRVGRSEQAIEAFNQAIHLNRNSYAAWY 583

Query: 210 QRHFVVHKMIVPGDRERVEQSLKEFRNFVDTHSNVVEACTLFAQVLVDQEDFDGAEEYFN 269
            R   +       DR+R  +++  F   +   +   EA     + L+  + +  A    +
Sbjct: 584 ARGLALSAA----DRDR--EAVWSFEQAIVIDNTPHEAWREQGKSLLFLKQYPQALASID 637

Query: 270 RSIRVDPENASLYVHRAMLMLQARGNVDEAIKLIEKAISIDKSCMFAYETLGTIEVQRGR 329
           ++I+   ++A LY+ RA + L A     EA+     AI I     +AY   G I    G 
Sbjct: 638 QAIQRQNQDAVLYMFRAGI-LSALNRYQEAVAAYTIAIDITPHS-WAYNNRGAIRKDLGD 695

Query: 330 LEEAVKCFNKALPLARDEAELSHIYSLRDAAIAQMKVCERYNIKKKVSPRSQNITKNEKL 389
           ++ A+  FN+A+                                 K++P++ N   N   
Sbjct: 696 VQGAIDDFNQAI---------------------------------KINPQNTNAYYNRGN 722

Query: 390 AIKQLRENNDIIIRPADKGGKTVVMDK--AD-YTQKMTSILNSNDYEIIPGDPTKTIEES 446
           A K+  +   +I   AD   K + ++   AD Y  +  +  +S D      D TK IE +
Sbjct: 723 ARKESGDWQGVI---ADYT-KAIDLNPQYADAYNNRGVARKDSGDLSGAIADYTKAIELN 778

Query: 447 EKY-GNLENESGQKHAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRN 505
             Y G   N    +  + D + A  D ++A K++P  A++Y +RG      G    A+ +
Sbjct: 779 PLYAGAYYNRGYARKDSGDLSGAIDDYNQAIKINPQDAEAYVRRGIARAHSGDLPGAISD 838

Query: 506 LDKTIALNPNFHVARAQR 523
             +TI +NP + +A   R
Sbjct: 839 FTETIKINPQYALAYNNR 856



 Score = 55.1 bits (131), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 78/373 (20%), Positives = 150/373 (40%), Gaps = 25/373 (6%)

Query: 153 FTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQRH 212
           + +A A +D+A +     A  Y  R  I     +Y+EA+     TIA++   H       
Sbjct: 629 YPQALASIDQAIQRQNQDAVLYMFRAGILSALNRYQEAVAAY--TIAIDITPHSWAYNNR 686

Query: 213 FVVHKMIVPGDRERVEQSLKEFRNFVDTHSNVVEACTLFAQVLVDQEDFDGAEEYFNRSI 272
             + K     D   V+ ++ +F   +  +     A         +  D+ G    + ++I
Sbjct: 687 GAIRK-----DLGDVQGAIDDFNQAIKINPQNTNAYYNRGNARKESGDWQGVIADYTKAI 741

Query: 273 RVDPENASLYVHRAMLMLQARGNVDEAIKLIEKAISIDKSCMFAYETLGTIEVQRGRLEE 332
            ++P+ A  Y +R +    + G++  AI    KAI ++     AY   G      G L  
Sbjct: 742 DLNPQYADAYNNRGVARKDS-GDLSGAIADYTKAIELNPLYAGAYYNRGYARKDSGDLSG 800

Query: 333 AVKCFNKALPLARDEAELSHIYSLRDAAIAQMKVCERYNIKKKVSPRSQNITKNEKLAI- 391
           A+  +N+A+ +   +AE    Y  R  A A        ++   +S  ++ I  N + A+ 
Sbjct: 801 AIDDYNQAIKINPQDAEA---YVRRGIARAHSG-----DLPGAISDFTETIKINPQYALA 852

Query: 392 ----KQLRENNDIIIRPADKGGKTVVMDKA---DYTQKMTSILNSNDYEIIPGDPTKTIE 444
                  R+++  +    D   + + ++      Y  +  +  NS D      D T+ I+
Sbjct: 853 YNNRGNARKDSGDLAGAIDDYNQAIKINPQLALAYNNRGNARRNSGDLSGAISDFTEAIK 912

Query: 445 ESEKYGNLENESGQKHAA-SDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEAL 503
            + +Y +     G   +   D   A +D  EA K++P  AD+Y  RG +  +      A+
Sbjct: 913 INPQYADAYYNRGVASSILEDMPGAISDFTEAIKINPQYADAYLNRGIVSSMSEDMPGAI 972

Query: 504 RNLDKTIALNPNF 516
            +  + I +NP +
Sbjct: 973 SDFTEAIKINPQY 985



 Score = 50.8 bits (120), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 49/229 (21%), Positives = 98/229 (42%), Gaps = 16/229 (6%)

Query: 115 TKAIEDLTQLVEDTSVDPKIKVNAHIKRAVVHLHAASDFTKAFADLDEAEKVDPNVADSY 174
           + AI D T+ +E   ++P +   A+  R      +  D + A  D ++A K++P  A++Y
Sbjct: 765 SGAIADYTKAIE---LNP-LYAGAYYNRGYARKDSG-DLSGAIDDYNQAIKINPQDAEAY 819

Query: 175 YQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQRHFVVHKMIVPGDRERVEQSLKEF 234
            +RG      G    A+ +  +TI +NP + +A   R           D   +  ++ ++
Sbjct: 820 VRRGIARAHSGDLPGAISDFTETIKINPQYALAYNNRGNARK------DSGDLAGAIDDY 873

Query: 235 RNFVDTHSNVVEACTLFAQVLVDQEDFDGAEEYFNRSIRVDPENASLYVHRAML--MLQA 292
              +  +  +  A         +  D  GA   F  +I+++P+ A  Y +R +   +L+ 
Sbjct: 874 NQAIKINPQLALAYNNRGNARRNSGDLSGAISDFTEAIKINPQYADAYYNRGVASSILE- 932

Query: 293 RGNVDEAIKLIEKAISIDKSCMFAYETLGTIEVQRGRLEEAVKCFNKAL 341
             ++  AI    +AI I+     AY   G +      +  A+  F +A+
Sbjct: 933 --DMPGAISDFTEAIKINPQYADAYLNRGIVSSMSEDMPGAISDFTEAI 979



 Score = 50.4 bits (119), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 52/225 (23%), Positives = 97/225 (43%), Gaps = 14/225 (6%)

Query: 118 IEDLTQLVEDTSVDPKIKVNAHIKRAVVHLHAASDFTKAFADLDEAEKVDPNVADSYYQR 177
           I D T+ ++   ++P+   +A+  R V    +  D + A AD  +A +++P  A +YY R
Sbjct: 734 IADYTKAID---LNPQY-ADAYNNRGVARKDSG-DLSGAIADYTKAIELNPLYAGAYYNR 788

Query: 178 GQIYCLFGQYEEALRNLDKTIALNPNFHVARAQRHFV-VHKMIVPGDRERVEQSLKEFRN 236
           G      G    A+ + ++ I +NP    A  +R     H   +PG       ++ +F  
Sbjct: 789 GYARKDSGDLSGAIDDYNQAIKINPQDAEAYVRRGIARAHSGDLPG-------AISDFTE 841

Query: 237 FVDTHSNVVEACTLFAQVLVDQEDFDGAEEYFNRSIRVDPENASLYVHRAMLMLQARGNV 296
            +  +     A         D  D  GA + +N++I+++P+ A  Y +R      + G++
Sbjct: 842 TIKINPQYALAYNNRGNARKDSGDLAGAIDDYNQAIKINPQLALAYNNRGNARRNS-GDL 900

Query: 297 DEAIKLIEKAISIDKSCMFAYETLGTIEVQRGRLEEAVKCFNKAL 341
             AI    +AI I+     AY   G        +  A+  F +A+
Sbjct: 901 SGAISDFTEAIKINPQYADAYYNRGVASSILEDMPGAISDFTEAI 945



 Score = 47.4 bits (111), Expect = 0.022,   Method: Compositional matrix adjust.
 Identities = 65/291 (22%), Positives = 117/291 (40%), Gaps = 55/291 (18%)

Query: 82   RHCTEEIESTSSNHTKALA-RLLRATVYIFTSQSTKAIEDLTQLVEDTSVDPKIKVN--- 137
            R  + ++    +++TKA+    L A  Y     + K   DL+  ++D   +  IK+N   
Sbjct: 758  RKDSGDLSGAIADYTKAIELNPLYAGAYYNRGYARKDSGDLSGAIDD--YNQAIKINPQD 815

Query: 138  --AHIKRAVVHLH------AASDFTK---------------------------AFADLDE 162
              A+++R +   H      A SDFT+                           A  D ++
Sbjct: 816  AEAYVRRGIARAHSGDLPGAISDFTETIKINPQYALAYNNRGNARKDSGDLAGAIDDYNQ 875

Query: 163  AEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQRHFVVHKMI--V 220
            A K++P +A +Y  RG      G    A+ +  + I +NP +  A   R  V   ++  +
Sbjct: 876  AIKINPQLALAYNNRGNARRNSGDLSGAISDFTEAIKINPQYADAYYNRG-VASSILEDM 934

Query: 221  PGDRERVEQSLKEFRNFVDTHSNVVEACTLFAQVLVDQEDFDGAEEYFNRSIRVDPENAS 280
            PG      +++K    + D + N     ++        ED  GA   F  +I+++P+ A 
Sbjct: 935  PGAISDFTEAIKINPQYADAYLNRGIVSSM-------SEDMPGAISDFTEAIKINPQYAD 987

Query: 281  LYVHRAM---LMLQARGNVDEAIKLIEKAISIDKS-CMFAYETLGTIEVQR 327
             Y +R +   L    +G +++  K  +      K  C  A + L  IEV R
Sbjct: 988  AYYNRGVARYLSEDKQGGIEDIQKGEQLLCQQGKPECQQAKDALKQIEVGR 1038


>gi|440294379|gb|ELP87396.1| tetratricopeptide repeat protein, tpr, putative [Entamoeba invadens
           IP1]
          Length = 915

 Score = 70.9 bits (172), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 63/282 (22%), Positives = 124/282 (43%), Gaps = 18/282 (6%)

Query: 90  STSSNHTKALARLLRATVYIFTSQSTKAIEDLTQLVEDTSVDPKIKVNAHIKRAVVHLHA 149
           +  +N  +   ++ +  +Y+ T +   AI+   QL++     P++ +  ++ R       
Sbjct: 239 TNGTNDLELDKQIAKGYLYVNTGKMQDAIKHFDQLLK---AHPEL-IAGYLGRGSAR-AM 293

Query: 150 ASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARA 209
           + D  +A  D D+A K++   AD+Y +RGQ+    G    AL +  + I L+P    +  
Sbjct: 294 SGDLKRALTDFDKAVKINAKCADAYKRRGQVKAALGNVNGALDDFTQAIKLSPEEADSYR 353

Query: 210 QRHFVVHKMIVPGDRERVEQSLKEFRNFVDTHSNVVEACTLF--AQVLVDQEDFDGAEEY 267
           QR  + H +   G  ++    LK+   +    + V+    L      LVD+     A   
Sbjct: 354 QRGSLFHSL---GVFDKASDDLKKSLKYAPGDAQVINELALCFNGMGLVDE-----AINA 405

Query: 268 FNRSIRVDPENASLYVHRAMLMLQARGNVDEAIKLIEKAISIDKSCMFAYETLGTIEVQR 327
           + R+I      A  Y+H   L  +  G    + +++EKA+ +  +   +Y  LG + V  
Sbjct: 406 YTRAINAKENYADPYIHLGQLY-RDMGCYIRSKQMLEKAMKLAPTNHLSYYVLGNVLVSS 464

Query: 328 GRLEEAVKCFNKALPLARDE--AELSHIYSLRDAAIAQMKVC 367
           GR  EA+    K++ L   +   E+  + +    A+ Q ++C
Sbjct: 465 GRHREALPFLQKSIELCPKDNCGEIVRMCAAAYLALGQNRLC 506



 Score = 41.2 bits (95), Expect = 1.3,   Method: Compositional matrix adjust.
 Identities = 18/53 (33%), Positives = 29/53 (54%)

Query: 462 ASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNP 514
           + D  +A  D D+A K++   AD+Y +RGQ+    G    AL +  + I L+P
Sbjct: 294 SGDLKRALTDFDKAVKINAKCADAYKRRGQVKAALGNVNGALDDFTQAIKLSP 346



 Score = 38.5 bits (88), Expect = 9.2,   Method: Compositional matrix adjust.
 Identities = 28/100 (28%), Positives = 47/100 (47%), Gaps = 1/100 (1%)

Query: 417 ADYTQKMTSILNSNDYEIIPGDPTKTIEESEKYGNLENESGQ-KHAASDFTKAFADLDEA 475
           A Y  + ++   S D +    D  K ++ + K  +     GQ K A  +   A  D  +A
Sbjct: 282 AGYLGRGSARAMSGDLKRALTDFDKAVKINAKCADAYKRRGQVKAALGNVNGALDDFTQA 341

Query: 476 EKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPN 515
            K+ P  ADSY QRG ++   G +++A  +L K++   P 
Sbjct: 342 IKLSPEEADSYRQRGSLFHSLGVFDKASDDLKKSLKYAPG 381


>gi|225629417|ref|ZP_03787450.1| TPR domain-containing protein [Brucella ceti str. Cudo]
 gi|225615913|gb|EEH12962.1| TPR domain-containing protein [Brucella ceti str. Cudo]
          Length = 315

 Score = 70.9 bits (172), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 55/183 (30%), Positives = 87/183 (47%), Gaps = 7/183 (3%)

Query: 167 DPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQRHFVVHKMIVPGDRER 226
           +P   + Y  RG  Y   G+Y+EA+R+ D+ IALNPNF+ A A R  V   M   GD  +
Sbjct: 96  NPRDPEGYNVRGSAYGKAGRYKEAMRDFDQAIALNPNFYQAYANRALVDRYM---GDNNK 152

Query: 227 VEQSLKEFRNFVDTHSNVVEACTLFAQVLVDQEDFDGAEEYFNRSIRVDPENASLYVHRA 286
              +++++   +  +     A      V       D A   FN++I +   +   Y +R 
Sbjct: 153 ---AVQDYSRAIQLNPQYDAAYIGRGNVYRQAGHLDQALNDFNQAIALRTTDGRAYHNRG 209

Query: 287 MLMLQARGNVDEAIKLIEKAISIDKSCMFAYETLGTIEVQRGRLEEAVKCFNKALPLARD 346
            L+ QA+G   +AI+   KAIS++ +    Y   G   V  G  + A   FN A+ L ++
Sbjct: 210 -LIYQAKGLHKQAIEDFSKAISLNSTAPEPYNGRGISYVALGDYDNAFDDFNTAITLDQN 268

Query: 347 EAE 349
            AE
Sbjct: 269 VAE 271



 Score = 48.5 bits (114), Expect = 0.009,   Method: Compositional matrix adjust.
 Identities = 22/48 (45%), Positives = 30/48 (62%)

Query: 479 DPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQRHFV 526
           +P   + Y  RG  Y   G+Y+EA+R+ D+ IALNPNF+ A A R  V
Sbjct: 96  NPRDPEGYNVRGSAYGKAGRYKEAMRDFDQAIALNPNFYQAYANRALV 143



 Score = 47.0 bits (110), Expect = 0.026,   Method: Compositional matrix adjust.
 Identities = 42/186 (22%), Positives = 82/186 (44%), Gaps = 11/186 (5%)

Query: 103 LRATVYIFTSQSTKAIEDLTQLVEDTSVDPKIKVNAHIKRAVVHLHAASDFTKAFADLDE 162
           +R + Y    +  +A+ D  Q +   +++P     A+  RA+V  +   D  KA  D   
Sbjct: 105 VRGSAYGKAGRYKEAMRDFDQAI---ALNPNF-YQAYANRALVDRYMG-DNNKAVQDYSR 159

Query: 163 AEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQRHFVVHKMIVPG 222
           A +++P    +Y  RG +Y   G  ++AL + ++ IAL      A   R  +     +  
Sbjct: 160 AIQLNPQYDAAYIGRGNVYRQAGHLDQALNDFNQAIALRTTDGRAYHNRGLIYQAKGLH- 218

Query: 223 DRERVEQSLKEFRNFVDTHSNVVEACTLFAQVLVDQEDFDGAEEYFNRSIRVDPENASLY 282
                +Q++++F   +  +S   E         V   D+D A + FN +I +D   A  +
Sbjct: 219 -----KQAIEDFSKAISLNSTAPEPYNGRGISYVALGDYDNAFDDFNTAITLDQNVAESW 273

Query: 283 VHRAML 288
            ++A++
Sbjct: 274 ANQALV 279



 Score = 40.8 bits (94), Expect = 1.8,   Method: Compositional matrix adjust.
 Identities = 27/105 (25%), Positives = 51/105 (48%), Gaps = 5/105 (4%)

Query: 104 RATVYIFTSQSTKAIEDLTQLVEDTSVDPKIKVNAHIKRAVVHLHAASDFTKAFADLDEA 163
           R  +Y       +AIED ++ +   S  P+     +  R + ++ A  D+  AF D + A
Sbjct: 208 RGLIYQAKGLHKQAIEDFSKAISLNSTAPE----PYNGRGISYV-ALGDYDNAFDDFNTA 262

Query: 164 EKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVAR 208
             +D NVA+S+  +  +Y   G   +A  +  +T+ L+P +  A+
Sbjct: 263 ITLDQNVAESWANQALVYEHNGDKAKAANSYARTVQLDPKYKPAK 307


>gi|72383071|ref|YP_292426.1| TPR repeat-containing protein [Prochlorococcus marinus str. NATL2A]
 gi|72002921|gb|AAZ58723.1| TPR repeat [Prochlorococcus marinus str. NATL2A]
          Length = 909

 Score = 70.9 bits (172), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 93/416 (22%), Positives = 177/416 (42%), Gaps = 46/416 (11%)

Query: 140 IKRAVVHLHAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIA 199
           I R + +L  A  +T+      +A K++PN A +Y   G +    G+ ++A  +  K I 
Sbjct: 111 ILRDLGNLQDAELYTR------KAIKINPNYALAYSNLGNVLKDLGKSQDAELSYRKAIQ 164

Query: 200 LNPNFHVARAQRHFVVHKMIVPGDRERVEQSLKEFRNFVDTHSNVVEACTLFAQVLVDQE 259
           +NPN+  A      ++ ++   G+ +  E S   +R  +  + N  +A +    VL D +
Sbjct: 165 INPNYADAHYNLGIILKEL---GNLQDAELS---YRKAIQINPNYADAYSNLGNVLKDLD 218

Query: 260 DFDGAEEYFNRSIRVDPENASLYVHRAMLMLQARGNVDEAIKLIEKAISIDKSCMFAYET 319
           +   AE  + ++I+++P  A  Y +    +L+  GN+ +A     KAI I+     A+  
Sbjct: 219 NLQDAELSYRKAIQINPSYADAYSNLGN-VLKDLGNLQDAELSYRKAIQINPDYAEAHFN 277

Query: 320 LGTIEVQRGRLEEAVKCFNKALPLARDEAELSHIYSLRDAAIAQMKVCERYNIKK-KVSP 378
           LG +    G+L++A   + KA+ +  D AE  +   +    +  ++  E YN K  ++ P
Sbjct: 278 LGNLLKDLGKLQDAELSYRKAIQIKSDYAEAHYNLGIILKDLGNLQDAEFYNRKAIQIKP 337

Query: 379 RSQNITKNEKLAIKQLRENNDIIIRPADKGGKTVVMDKADYTQKMTSILNS-------ND 431
                  N  + +K L       ++ A+   +  +  K DY    +++ N         D
Sbjct: 338 DYAEAHFNLGIILKDLGN-----LQDAEFSYRQAIQIKPDYADAYSNLGNVLKDLGKLKD 392

Query: 432 YEIIPGDPTKTIEESEKYGNLENESGQKHAASDFTKAFADLDEAE-------KVDPNVAD 484
            E+      K I+    Y  + +  G      +  K   +L +AE       ++ P+ AD
Sbjct: 393 AEL---SYRKAIQIKPDYAEVYSNLG------NVLKDLGNLQDAEFSYRKAIQIKPDYAD 443

Query: 485 SYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQRHFVWTSTLAELMAFSDE 540
           +Y   G I      + +A+      + LN    +  AQ   +  ST   +  +SDE
Sbjct: 444 AYSNLGNILKELSNFTDAINQFKDALKLNN--ELTSAQTGLM--STQGNICDWSDE 495


>gi|294853920|ref|ZP_06794592.1| hypothetical protein BAZG_02903 [Brucella sp. NVSL 07-0026]
 gi|294819575|gb|EFG36575.1| hypothetical protein BAZG_02903 [Brucella sp. NVSL 07-0026]
          Length = 315

 Score = 70.9 bits (172), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 55/183 (30%), Positives = 87/183 (47%), Gaps = 7/183 (3%)

Query: 167 DPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQRHFVVHKMIVPGDRER 226
           +P   + Y  RG  Y   G+Y+EA+R+ D+ IALNPNF+ A A R  V   M   GD  +
Sbjct: 96  NPRDPEGYNVRGSAYGKAGRYKEAMRDFDQAIALNPNFYQAYANRALVDRYM---GDNNK 152

Query: 227 VEQSLKEFRNFVDTHSNVVEACTLFAQVLVDQEDFDGAEEYFNRSIRVDPENASLYVHRA 286
              +++++   +  +     A      V       D A   FN++I +   +   Y +R 
Sbjct: 153 ---AVQDYSRAIQLNPQYDAAYIGRGNVYRQAGHLDQALNDFNQAIALRTTDGRAYHNRG 209

Query: 287 MLMLQARGNVDEAIKLIEKAISIDKSCMFAYETLGTIEVQRGRLEEAVKCFNKALPLARD 346
            L+ QA+G   +AI+   KAIS++ +    Y   G   V  G  + A   FN A+ L ++
Sbjct: 210 -LIYQAKGLHKQAIEDFSKAISLNSTAPEPYNGRGISYVALGDYDNAFDDFNTAITLDQN 268

Query: 347 EAE 349
            AE
Sbjct: 269 VAE 271



 Score = 48.5 bits (114), Expect = 0.009,   Method: Compositional matrix adjust.
 Identities = 22/48 (45%), Positives = 30/48 (62%)

Query: 479 DPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQRHFV 526
           +P   + Y  RG  Y   G+Y+EA+R+ D+ IALNPNF+ A A R  V
Sbjct: 96  NPRDPEGYNVRGSAYGKAGRYKEAMRDFDQAIALNPNFYQAYANRALV 143



 Score = 46.6 bits (109), Expect = 0.031,   Method: Compositional matrix adjust.
 Identities = 42/186 (22%), Positives = 82/186 (44%), Gaps = 11/186 (5%)

Query: 103 LRATVYIFTSQSTKAIEDLTQLVEDTSVDPKIKVNAHIKRAVVHLHAASDFTKAFADLDE 162
           +R + Y    +  +A+ D  Q +   +++P     A+  RA+V  +   D  KA  D   
Sbjct: 105 VRGSAYGKAGRYKEAMRDFDQAI---ALNPNF-YQAYANRALVDRYMG-DNNKAVQDYSR 159

Query: 163 AEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQRHFVVHKMIVPG 222
           A +++P    +Y  RG +Y   G  ++AL + ++ IAL      A   R  +     +  
Sbjct: 160 AIQLNPQYDAAYIGRGNVYRQAGHLDQALNDFNQAIALRTTDGRAYHNRGLIYQAKGLH- 218

Query: 223 DRERVEQSLKEFRNFVDTHSNVVEACTLFAQVLVDQEDFDGAEEYFNRSIRVDPENASLY 282
                +Q++++F   +  +S   E         V   D+D A + FN +I +D   A  +
Sbjct: 219 -----KQAIEDFSKAISLNSTAPEPYNGRGISYVALGDYDNAFDDFNTAITLDQNVAESW 273

Query: 283 VHRAML 288
            ++A++
Sbjct: 274 ANQALV 279


>gi|289191717|ref|YP_003457658.1| TPR repeat-containing protein [Methanocaldococcus sp. FS406-22]
 gi|288938167|gb|ADC68922.1| TPR repeat-containing protein [Methanocaldococcus sp. FS406-22]
          Length = 308

 Score = 70.9 bits (172), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 48/208 (23%), Positives = 103/208 (49%), Gaps = 8/208 (3%)

Query: 135 KVNAHIKRAVVH-LHAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRN 193
           K +  +K A+   L    ++  A   LDE  K  P  A ++ ++G+I    G+ +++L  
Sbjct: 104 KSDLSVKYAIAFILKKLGEYDSALKILDEVLKKYPQSAIAWAEKGEILYKEGKLKKSLEC 163

Query: 194 LDKTIALNPNFHVARAQRHFVVHKMIVPGDRERVEQSLKEFRNFVDTHSNVVEACTLFAQ 253
            D  + +NPN   +   +  ++ K+       R  ++LK F+   + +   + A     Q
Sbjct: 164 FDNALKINPNDCQSLQYKGEILFKL------GRYGEALKCFKKVFERNDKDIRALMYIIQ 217

Query: 254 VLVDQEDFDGAEEYFNRSIRVDPENASLYVHRAMLMLQARGNVDEAIKLIEKAISIDKSC 313
           +L+       A EY  ++++++P++  LY+++ + +L   G   +AIK  +K + I+ + 
Sbjct: 218 ILIYLGRLSQALEYTKKALKLNPDDPLLYLYKGI-ILNKLGKYKDAIKYFDKVLEINPNF 276

Query: 314 MFAYETLGTIEVQRGRLEEAVKCFNKAL 341
             A+        + G++ EA++C+N+AL
Sbjct: 277 PEAWNGKAVALEKLGKINEAIECYNRAL 304



 Score = 45.1 bits (105), Expect = 0.091,   Method: Compositional matrix adjust.
 Identities = 35/169 (20%), Positives = 81/169 (47%), Gaps = 7/169 (4%)

Query: 172 DSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQRHFVVHKMIVPGDRERVEQSL 231
           D Y ++ +I    G+ +EAL   DK + + P + +A    +F+   ++V     R+E++ 
Sbjct: 40  DIYVRKAKILRTMGKNDEALEYFDKALKIKPKYILA----NFLKGALLV--SLGRLEEAK 93

Query: 232 KEFRNFVDTHSNVVEACTLFAQVLVDQEDFDGAEEYFNRSIRVDPENASLYVHRAMLMLQ 291
           + F        + +      A +L    ++D A +  +  ++  P++A  +  +  ++ +
Sbjct: 94  EIFLKLYRLKKSDLSVKYAIAFILKKLGEYDSALKILDEVLKKYPQSAIAWAEKGEILYK 153

Query: 292 ARGNVDEAIKLIEKAISIDKSCMFAYETLGTIEVQRGRLEEAVKCFNKA 340
             G + ++++  + A+ I+ +   + +  G I  + GR  EA+KCF K 
Sbjct: 154 -EGKLKKSLECFDNALKINPNDCQSLQYKGEILFKLGRYGEALKCFKKV 201



 Score = 41.6 bits (96), Expect = 1.2,   Method: Compositional matrix adjust.
 Identities = 35/159 (22%), Positives = 78/159 (49%), Gaps = 12/159 (7%)

Query: 187 YEEALRNLDKTIALN--PNFHVARAQRHFVVHKMIVPGDRERVEQSLKEFRNFVDTHSNV 244
           YE+AL  +DK + +   P+ +V +A+   ++  M       + +++L+ F   +      
Sbjct: 22  YEKALYLIDKILEIRKAPDIYVRKAK---ILRTM------GKNDEALEYFDKALKIKPKY 72

Query: 245 VEACTLFAQVLVDQEDFDGAEEYFNRSIRVDPENASLYVHRAMLMLQARGNVDEAIKLIE 304
           + A  L   +LV     + A+E F +  R+   + S+  +    +L+  G  D A+K+++
Sbjct: 73  ILANFLKGALLVSLGRLEEAKEIFLKLYRLKKSDLSV-KYAIAFILKKLGEYDSALKILD 131

Query: 305 KAISIDKSCMFAYETLGTIEVQRGRLEEAVKCFNKALPL 343
           + +        A+   G I  + G+L+++++CF+ AL +
Sbjct: 132 EVLKKYPQSAIAWAEKGEILYKEGKLKKSLECFDNALKI 170


>gi|158339402|ref|YP_001520579.1| hypothetical protein AM1_6330 [Acaryochloris marina MBIC11017]
 gi|158309643|gb|ABW31260.1| TPR domain protein [Acaryochloris marina MBIC11017]
          Length = 1346

 Score = 70.9 bits (172), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 99/439 (22%), Positives = 173/439 (39%), Gaps = 96/439 (21%)

Query: 139  HIKRAVVHLHAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTI 198
            +I R  V L     + +    L++A ++DPN+A +Y  RG  Y    + +EA+ +L K I
Sbjct: 689  YINRGWV-LIKMDRYEETLTALNQAIEIDPNMAIAYTNRGVTYSFLKRPKEAIADLKKAI 747

Query: 199  ALNPNFHVARAQRHFVVHKMIVPGDRERVEQSLKEFRN--FVDTHSNVVEACTLFAQVLV 256
            AL+  +  A      + H       + R +++L +F     +D  + +  +   F  V  
Sbjct: 748  ALDSQYISAYGGLGMLYH------SQGRYQEALAQFNQGIAIDPKNPINYSGQGF--VYF 799

Query: 257  DQEDFDGAEEYFNRSIRVDPENASLYVHRAMLMLQA------------------------ 292
             Q+ +  A     ++I ++P++A+ Y  RA + +                          
Sbjct: 800  AQKQYQDAIAAHTKAIELEPDSANDYFSRANVYITTQQYQDAIADLTKAIRLAPPDPIYF 859

Query: 293  --RGNVDEAIKLIE-------KAISIDKSCMFAYETLGTIEVQRGRLEEAVKCFNKALPL 343
              RG+  +A+   E       +AI +DK+   AY  LGT+  +  + + A+  F+KA+ +
Sbjct: 860  NNRGDAYDALNQPEAALADYSQAIEVDKNNTRAYIGLGTVYQRARQYQRAIAQFDKAIEV 919

Query: 344  A-------RDEAELSHIYSLRDAAIAQMKVCER----YNIKKKVSPRSQNITKNEKLAIK 392
            A        D+      YS R    + +   E+    ++   ++SP+   + +   L   
Sbjct: 920  ADFPQKLETDKKYKGLAYSARGFLYSDLGKLEQAIADFSQAIELSPKVTYLYRARALNYT 979

Query: 393  QLRENNDIIIRPADKGGKTVVMDKADYTQKMTSILNSNDYEIIPGDPTKTIEESEKYGNL 452
             L    + I               ADYTQ +         EI P D +  I   + Y  L
Sbjct: 980  ALNRYQEAI---------------ADYTQAI---------EIAPKDLSTYIRRGKIYRTL 1015

Query: 453  ENESGQKHAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIAL 512
              E          T+A AD  +    +P+ +  Y  R  +Y    +Y EAL +  K I L
Sbjct: 1016 GQE----------TEANADFQKVLTTEPSDSQGYGVRADVYKSLKRYPEALADYTKAIEL 1065

Query: 513  NPN-------FHVARAQRH 524
             P         H +RAQ H
Sbjct: 1066 APQNPFQRSLLHSSRAQMH 1084



 Score = 59.7 bits (143), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 105/484 (21%), Positives = 193/484 (39%), Gaps = 113/484 (23%)

Query: 119  EDLTQLVEDTSVDPKIKVNAHIKRAVVHLHAASDFTK----AFADLDEAEKVDPNVADSY 174
            E LT L +   +DP + + A+  R V +      F K    A ADL +A  +D     +Y
Sbjct: 704  ETLTALNQAIEIDPNMAI-AYTNRGVTY-----SFLKRPKEAIADLKKAIALDSQYISAY 757

Query: 175  YQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQRHFVVHKMIVPGDRERVEQSLKEF 234
               G +Y   G+Y+EAL   ++ IA++P   +  + + FV                 K++
Sbjct: 758  GGLGMLYHSQGRYQEALAQFNQGIAIDPKNPINYSGQGFVYFAQ-------------KQY 804

Query: 235  RNFVDTHSNVVE-----ACTLF--AQVLVDQEDFDGAEEYFNRSIRVDPENASLYVHRAM 287
            ++ +  H+  +E     A   F  A V +  + +  A     ++IR+ P +  +Y +   
Sbjct: 805  QDAIAAHTKAIELEPDSANDYFSRANVYITTQQYQDAIADLTKAIRLAPPD-PIYFNNRG 863

Query: 288  LMLQARGNVDEAIKLIEKAISIDKSCMFAYETLGTI-----EVQR--------------- 327
                A    + A+    +AI +DK+   AY  LGT+     + QR               
Sbjct: 864  DAYDALNQPEAALADYSQAIEVDKNNTRAYIGLGTVYQRARQYQRAIAQFDKAIEVADFP 923

Query: 328  ------------------------GRLEEAVKCFNKALPLARDEAELSHIYSLRDAAIAQ 363
                                    G+LE+A+  F++A+ L+     L    +L   A+ +
Sbjct: 924  QKLETDKKYKGLAYSARGFLYSDLGKLEQAIADFSQAIELSPKVTYLYRARALNYTALNR 983

Query: 364  MK-VCERYNIKKKVSPR--SQNITKNE--KLAIKQLRENND----IIIRPADKGGKTVVM 414
             +     Y    +++P+  S  I + +  +   ++   N D    +   P+D  G  V  
Sbjct: 984  YQEAIADYTQAIEIAPKDLSTYIRRGKIYRTLGQETEANADFQKVLTTEPSDSQGYGVRA 1043

Query: 415  DK-----------ADYTQKMTSILNSNDYEIIPGDP-TKTIEESEK---YGNLENESGQK 459
            D            ADYT+ +         E+ P +P  +++  S +   +GNL+     +
Sbjct: 1044 DVYKSLKRYPEALADYTKAI---------ELAPQNPFQRSLLHSSRAQMHGNLQQY---E 1091

Query: 460  HAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVA 519
             A  D++KA A L       P  AD Y  RG  +  + + ++AL + ++ I ++P   +A
Sbjct: 1092 QANLDYSKALALL--PNPTVPFAADLYIARGNNFLSWQRQDDALADFNQAIGISPKNVMA 1149

Query: 520  RAQR 523
               R
Sbjct: 1150 YVGR 1153



 Score = 55.5 bits (132), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 110/466 (23%), Positives = 186/466 (39%), Gaps = 42/466 (9%)

Query: 72   FEHEDYLTAIRHCTE--EIESTSSNHTKALARLLRATVYIFTSQSTKAIEDLTQLVEDTS 129
            F  + Y  AI   T+  E+E  S+N         RA VYI T Q   AI DLT+ +    
Sbjct: 799  FAQKQYQDAIAAHTKAIELEPDSAND-----YFSRANVYITTQQYQDAIADLTKAIRLAP 853

Query: 130  VDPKIKVNAHIKRAVVHLHAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEE 189
             DP I  N    R   +  A +    A AD  +A +VD N   +Y   G +Y    QY+ 
Sbjct: 854  PDP-IYFN---NRGDAY-DALNQPEAALADYSQAIEVDKNNTRAYIGLGTVYQRARQYQR 908

Query: 190  ALRNLDKTIALNPNF-----------HVARAQRHFVVHKMIVPGDRERVEQSLKEFRNFV 238
            A+   DK I +  +F            +A + R F+        D  ++EQ++ +F   +
Sbjct: 909  AIAQFDKAIEVA-DFPQKLETDKKYKGLAYSARGFLYS------DLGKLEQAIADFSQAI 961

Query: 239  DTHSNVVEACTLFAQVLVDQEDFDGAEEYFNRSIRVDPENASLYVHRAMLMLQARGNVDE 298
            +    V       A        +  A   + ++I + P++ S Y+ R  +  +  G   E
Sbjct: 962  ELSPKVTYLYRARALNYTALNRYQEAIADYTQAIEIAPKDLSTYIRRGKIY-RTLGQETE 1020

Query: 299  AIKLIEKAISIDKSCMFAYETLGTIEVQRGRLEEAVKCFNKALPLA-RDEAELSHIYSLR 357
            A    +K ++ + S    Y     +     R  EA+  + KA+ LA ++  + S ++S R
Sbjct: 1021 ANADFQKVLTTEPSDSQGYGVRADVYKSLKRYPEALADYTKAIELAPQNPFQRSLLHSSR 1080

Query: 358  DAAIAQMKVCERYNIK-KKVSPRSQNITKNEKLAIKQLRENNDIIIRPADKG----GKTV 412
                  ++  E+ N+   K      N T      +   R NN +  +  D       + +
Sbjct: 1081 AQMHGNLQQYEQANLDYSKALALLPNPTVPFAADLYIARGNNFLSWQRQDDALADFNQAI 1140

Query: 413  VMDKAD---YTQKMTSILNSNDYEIIPGDPTKTIEESEKYGNLEN-ESGQKHAASDFTKA 468
             +   +   Y  +    L +  Y+    D +  I+ + K G + +  S    A +    A
Sbjct: 1141 GISPKNVMAYVGRGRLSLGTQKYQDALADFSTVIKLNPKLGFVYDFRSRTYQALNRIEDA 1200

Query: 469  FADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNP 514
             AD D+  +   N A SY +RG ++ L      AL +  + I LNP
Sbjct: 1201 IADADQWIERQANAA-SYTRRGILHVLGANPSLALNDFQQAITLNP 1245



 Score = 44.7 bits (104), Expect = 0.13,   Method: Compositional matrix adjust.
 Identities = 77/350 (22%), Positives = 139/350 (39%), Gaps = 52/350 (14%)

Query: 171 ADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNF-HVARAQRHFVVHKMIVPGDRERVEQ 229
           A+ + +RG       QY EAL   D+ I LNP+F H+A         K +V   +E    
Sbjct: 550 AEVWIERGNQLWRLEQYAEALAAFDRAIQLNPSFVHLAW------YGKALVYRSQENFPA 603

Query: 230 SLKEFRNFVDTHSNVVEACTLFAQVLVDQEDFDGAEEYFNRSIRVDPENASLYVHRAMLM 289
           +       ++   N      + +     Q+  + A    N  +++ P +A L ++   ++
Sbjct: 604 AETALLKVLNLKPNYKPGWKVLSAAYRLQKKPEQALTAVNSGLKIAPTDAQL-LNEKYVV 662

Query: 290 LQARGNVDEAIKLIEKAISIDKSCMFAYETLGTIEVQRGRLEEAVKCFNKALPLARDEAE 349
           L       EA+  I+ AI+      F Y   G + ++  R EE +   N+A+ +   +  
Sbjct: 663 LSELYRYSEALAAIDAAIAQAPRAAF-YINRGWVLIKMDRYEETLTALNQAIEI---DPN 718

Query: 350 LSHIYSLRDAAIAQMKVCER--YNIKKKVSPRSQNITKNEKLAIKQLRENNDIIIRPADK 407
           ++  Y+ R    + +K  +    ++KK ++  SQ I+                       
Sbjct: 719 MAIAYTNRGVTYSFLKRPKEAIADLKKAIALDSQYISA---------------------Y 757

Query: 408 GGKTVVMDKADYTQKMTSILNSNDYEIIPGDPTKTIEESEKYGNLENESGQK---HAASD 464
           GG  ++       Q+  +  N      I  DP   I          N SGQ     A   
Sbjct: 758 GGLGMLYHSQGRYQEALAQFNQG----IAIDPKNPI----------NYSGQGFVYFAQKQ 803

Query: 465 FTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNP 514
           +  A A   +A +++P+ A+ Y+ R  +Y    QY++A+ +L K I L P
Sbjct: 804 YQDAIAAHTKAIELEPDSANDYFSRANVYITTQQYQDAIADLTKAIRLAP 853



 Score = 43.1 bits (100), Expect = 0.41,   Method: Compositional matrix adjust.
 Identities = 41/188 (21%), Positives = 81/188 (43%), Gaps = 8/188 (4%)

Query: 156  AFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQRHFVV 215
            A AD ++A  + P    +Y  RG++     +Y++AL +    I LNP        R    
Sbjct: 1132 ALADFNQAIGISPKNVMAYVGRGRLSLGTQKYQDALADFSTVIKLNPKLGFVYDFRSRTY 1191

Query: 216  HKMIVPGDRERVEQSLKEFRNFVDTHSNVVEACTLFAQVLVDQEDFDGAEEYFNRSIRVD 275
              +       R+E ++ +   +++  +N   + T    + V   +   A   F ++I ++
Sbjct: 1192 QAL------NRIEDAIADADQWIERQANAA-SYTRRGILHVLGANPSLALNDFQQAITLN 1244

Query: 276  PENASLYVHRAMLMLQARGNVDEAIKLIEKAISIDKSCMFAYETLGTIEVQRGRLEEAVK 335
            P+     V+  ++  + +GN  +AI   ++AI +D S       L T     G+ ++A+ 
Sbjct: 1245 PKAIIPTVNLGLIYYE-QGNRKQAIAQFQRAIELDGSLAEPQLALATALYHGGQQKQAIA 1303

Query: 336  CFNKALPL 343
                AL L
Sbjct: 1304 LAQSALKL 1311


>gi|411007460|ref|ZP_11383789.1| hypothetical protein SgloC_32050 [Streptomyces globisporus C-1027]
          Length = 800

 Score = 70.9 bits (172), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 59/215 (27%), Positives = 102/215 (47%), Gaps = 9/215 (4%)

Query: 129 SVDPKIKVNAHIKRAVVHLHAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYE 188
           +VDP+ +  AH  RAV+ L +   + +A ADLD AE++ P  A +  +RG+ Y   G+  
Sbjct: 574 AVDPRSE-RAHQGRAVI-LRSLGRYEEALADLDRAEEIAPAWAWAVRERGETYRRMGRLA 631

Query: 189 EALRNLDKTIALNPNFHVARAQRHFVVHKMIVPGDRERVEQSLKEFRNFVDTHSNVVEAC 248
           EAL  LD+  A++P+  V    R  V H +  P      E++L +F   +        A 
Sbjct: 632 EALTVLDRAHAMDPSDAVPLGSRGLVRHVLGRP------EEALDDFDRAIALWPEYAWAL 685

Query: 249 TLFAQVLVDQEDFDGAEEYFNRSIRVDPENASLYVHRAMLMLQARGNVDEAIKLIEKAIS 308
              ++V     D  GA    +R+  ++P        R  +  +A G  +EA+   ++A++
Sbjct: 686 VRRSRVRTVLGDPVGALADLDRAEELNPGLPGTEGERGEVY-RATGRYEEAVACYDRALA 744

Query: 309 IDKSCMFAYETLGTIEVQRGRLEEAVKCFNKALPL 343
           +D    +A+ +        GRL EA    ++A+ L
Sbjct: 745 LDPDYAWAHGSRALALEALGRLPEARADLDRAVEL 779



 Score = 54.3 bits (129), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 55/261 (21%), Positives = 109/261 (41%), Gaps = 44/261 (16%)

Query: 268 FNRSIRVDPENASLYVHRAMLMLQARGNVDEAIKLIEKAISIDKSCMFAYETLGTIEVQR 327
             R+   D + A+  V RA    +A G +D A+    +AI++D     A++    I    
Sbjct: 535 LTRAELTDTDRAAALVARAWDRFRA-GELDAALSDHGRAIAVDPRSERAHQGRAVILRSL 593

Query: 328 GRLEEAVKCFNKALPLARDEAELSHIYSLRDAAIAQMKVCERYNIKKKVSPRSQNITKNE 387
           GR EEA+   ++A     +E   +  +++R+      ++  R      V  R+  +  ++
Sbjct: 594 GRYEEALADLDRA-----EEIAPAWAWAVRERGETYRRMG-RLAEALTVLDRAHAMDPSD 647

Query: 388 KLAIKQLRENNDIIIRPADKGGKTVVMDKAD-----YTQKMTSILNSNDYEIIPGDPTKT 442
            + +        ++ RP +       +D  D     + +   +++  +    + GDP   
Sbjct: 648 AVPLGSRGLVRHVLGRPEE------ALDDFDRAIALWPEYAWALVRRSRVRTVLGDPVG- 700

Query: 443 IEESEKYGNLENESGQKHAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEA 502
                                    A ADLD AE+++P +  +  +RG++Y   G+YEEA
Sbjct: 701 -------------------------ALADLDRAEELNPGLPGTEGERGEVYRATGRYEEA 735

Query: 503 LRNLDKTIALNPNFHVARAQR 523
           +   D+ +AL+P++  A   R
Sbjct: 736 VACYDRALALDPDYAWAHGSR 756



 Score = 51.6 bits (122), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 67/252 (26%), Positives = 106/252 (42%), Gaps = 17/252 (6%)

Query: 100 ARLLRATVYIFTSQSTKAIEDLTQLVEDTSVDPKIKVNAHIKRAVVHLHAASDFTKAFAD 159
            R L A +     + T A+  L    E T  D   +  A + RA     A  +   A +D
Sbjct: 513 GRDLLAAITDHGPRPTAALGLLLTRAELTDTD---RAAALVARAWDRFRA-GELDAALSD 568

Query: 160 LDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQRHFVVHKMI 219
              A  VDP    ++  R  I    G+YEEAL +LD+   + P +  A  +R     +M 
Sbjct: 569 HGRAIAVDPRSERAHQGRAVILRSLGRYEEALADLDRAEEIAPAWAWAVRERGETYRRM- 627

Query: 220 VPGDRERVEQSLKEF-RNFVDTHSNVVEACT--LFAQVLVDQEDFDGAEEYFNRSIRVDP 276
                 R+ ++L    R      S+ V   +  L   VL   E+   A + F+R+I + P
Sbjct: 628 -----GRLAEALTVLDRAHAMDPSDAVPLGSRGLVRHVLGRPEE---ALDDFDRAIALWP 679

Query: 277 ENASLYVHRAMLMLQARGNVDEAIKLIEKAISIDKSCMFAYETLGTIEVQRGRLEEAVKC 336
           E A   V R+ +     G+   A+  +++A  ++          G +    GR EEAV C
Sbjct: 680 EYAWALVRRSRVR-TVLGDPVGALADLDRAEELNPGLPGTEGERGEVYRATGRYEEAVAC 738

Query: 337 FNKALPLARDEA 348
           +++AL L  D A
Sbjct: 739 YDRALALDPDYA 750



 Score = 45.1 bits (105), Expect = 0.11,   Method: Compositional matrix adjust.
 Identities = 23/62 (37%), Positives = 35/62 (56%)

Query: 465 FTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQRH 524
           + +A ADLD AE++ P  A +  +RG+ Y   G+  EAL  LD+  A++P+  V    R 
Sbjct: 596 YEEALADLDRAEEIAPAWAWAVRERGETYRRMGRLAEALTVLDRAHAMDPSDAVPLGSRG 655

Query: 525 FV 526
            V
Sbjct: 656 LV 657


>gi|237816772|ref|ZP_04595764.1| TPR domain-containing protein [Brucella abortus str. 2308 A]
 gi|376270821|ref|YP_005113866.1| hypothetical protein BAA13334_II00651 [Brucella abortus A13334]
 gi|376277527|ref|YP_005153588.1| hypothetical protein BCA52141_II1638 [Brucella canis HSK A52141]
 gi|384213475|ref|YP_005602558.1| hypothetical protein BM590_B0937 [Brucella melitensis M5-90]
 gi|384410576|ref|YP_005599196.1| hypothetical protein BM28_B0938 [Brucella melitensis M28]
 gi|384447076|ref|YP_005661294.1| hypothetical protein [Brucella melitensis NI]
 gi|237787585|gb|EEP61801.1| TPR domain-containing protein [Brucella abortus str. 2308 A]
 gi|326411123|gb|ADZ68187.1| TPR repeat-containing protein [Brucella melitensis M28]
 gi|326554415|gb|ADZ89054.1| TPR repeat-containing protein [Brucella melitensis M5-90]
 gi|349745073|gb|AEQ10615.1| TPR repeat-containing protein [Brucella melitensis NI]
 gi|363401993|gb|AEW18962.1| TPR repeat-containing protein [Brucella abortus A13334]
 gi|363405901|gb|AEW16195.1| TPR repeat-containing protein [Brucella canis HSK A52141]
          Length = 315

 Score = 70.9 bits (172), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 55/183 (30%), Positives = 87/183 (47%), Gaps = 7/183 (3%)

Query: 167 DPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQRHFVVHKMIVPGDRER 226
           +P   + Y  RG  Y   G+Y+EA+R+ D+ IALNPNF+ A A R  V   M   GD  +
Sbjct: 96  NPRDPEGYNVRGSAYGKAGRYKEAMRDFDQAIALNPNFYQAYANRALVDRYM---GDNNK 152

Query: 227 VEQSLKEFRNFVDTHSNVVEACTLFAQVLVDQEDFDGAEEYFNRSIRVDPENASLYVHRA 286
              +++++   +  +     A      V       D A   FN++I +   +   Y +R 
Sbjct: 153 ---AVQDYSRAIQLNPQYDAAYIGRGNVYRQAGHLDQALNDFNQAIALRTTDGRAYHNRG 209

Query: 287 MLMLQARGNVDEAIKLIEKAISIDKSCMFAYETLGTIEVQRGRLEEAVKCFNKALPLARD 346
            L+ QA+G   +AI+   KAIS++ +    Y   G   V  G  + A   FN A+ L ++
Sbjct: 210 -LIYQAKGLHKQAIEDFSKAISLNSTAPEPYNGRGISYVALGDYDNAFDDFNTAITLDQN 268

Query: 347 EAE 349
            AE
Sbjct: 269 VAE 271



 Score = 48.5 bits (114), Expect = 0.008,   Method: Compositional matrix adjust.
 Identities = 47/208 (22%), Positives = 92/208 (44%), Gaps = 12/208 (5%)

Query: 103 LRATVYIFTSQSTKAIEDLTQLVEDTSVDPKIKVNAHIKRAVVHLHAASDFTKAFADLDE 162
           +R + Y    +  +A+ D  Q +   +++P     A+  RA+V  +   D  KA  D   
Sbjct: 105 VRGSAYGKAGRYKEAMRDFDQAI---ALNPNF-YQAYANRALVDRYMG-DNNKAVQDYSR 159

Query: 163 AEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQRHFVVHKMIVPG 222
           A +++P    +Y  RG +Y   G  ++AL + ++ IAL      A   R  +     +  
Sbjct: 160 AIQLNPQYDAAYIGRGNVYRQAGHLDQALNDFNQAIALRTTDGRAYHNRGLIYQAKGLH- 218

Query: 223 DRERVEQSLKEFRNFVDTHSNVVEACTLFAQVLVDQEDFDGAEEYFNRSIRVDPENASLY 282
                +Q++++F   +  +S   E         V   D+D A + FN +I +D   A  +
Sbjct: 219 -----KQAIEDFSKAISLNSTAPEPYNGRGISYVALGDYDNAFDDFNTAITLDQNVAESW 273

Query: 283 VHRAMLMLQARGNVDEAIKLIEKAISID 310
            ++A L+ +  G+  +A     +A+ +D
Sbjct: 274 ANQA-LVYEHNGDKAKAANSYARAVQLD 300



 Score = 48.5 bits (114), Expect = 0.009,   Method: Compositional matrix adjust.
 Identities = 22/48 (45%), Positives = 30/48 (62%)

Query: 479 DPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQRHFV 526
           +P   + Y  RG  Y   G+Y+EA+R+ D+ IALNPNF+ A A R  V
Sbjct: 96  NPRDPEGYNVRGSAYGKAGRYKEAMRDFDQAIALNPNFYQAYANRALV 143



 Score = 38.9 bits (89), Expect = 7.2,   Method: Compositional matrix adjust.
 Identities = 26/105 (24%), Positives = 50/105 (47%), Gaps = 5/105 (4%)

Query: 104 RATVYIFTSQSTKAIEDLTQLVEDTSVDPKIKVNAHIKRAVVHLHAASDFTKAFADLDEA 163
           R  +Y       +AIED ++ +   S  P+     +  R + ++ A  D+  AF D + A
Sbjct: 208 RGLIYQAKGLHKQAIEDFSKAISLNSTAPE----PYNGRGISYV-ALGDYDNAFDDFNTA 262

Query: 164 EKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVAR 208
             +D NVA+S+  +  +Y   G   +A  +  + + L+P +  A+
Sbjct: 263 ITLDQNVAESWANQALVYEHNGDKAKAANSYARAVQLDPKYKPAK 307


>gi|414079262|ref|YP_007000686.1| hypothetical protein ANA_C20172 [Anabaena sp. 90]
 gi|413972541|gb|AFW96629.1| TPR repeat-containing protein [Anabaena sp. 90]
          Length = 619

 Score = 70.9 bits (172), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 67/263 (25%), Positives = 121/263 (46%), Gaps = 12/263 (4%)

Query: 89  ESTSSNHTKALARLLRATVYIFTSQSTKAIEDLTQLVEDTSVDPKIKVNAHIKRAVVHLH 148
           E+ + N+       +R   Y   S+   A  D TQ +E  S      V A+  R+ V  +
Sbjct: 345 EAINCNNNDPQIYNMRGRSYYELSKYEDAFSDFTQAIELDSD----YVEAYGNRSAVS-Y 399

Query: 149 AASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVAR 208
              ++ KA  D ++A K+DP+ AD+Y  RGQ      QY+ A+++  K+I+ +P   +A 
Sbjct: 400 RLKNYRKALQDSNKALKIDPSCADAYLNRGQAREGLKQYKGAIQDYTKSISFDPGMVLAY 459

Query: 209 AQRHFVVHKMIVPGDRERVEQSLKEFRNFVDTHSNVVEACTLFAQVLVDQEDFDGAEEYF 268
             R    +++      E  + ++++    +    N   A       + + +D+  A +  
Sbjct: 460 NNRGLAKYEI------EDYQGAIEDCTEALKLDPNCALAYNNRGLAMYEIKDYHRAIDDC 513

Query: 269 NRSIRVDPENASLYVHRAMLMLQARGNVDEAIKLIEKAISIDKSCMFAYETLGTIEVQRG 328
           N++I++D + A  Y  R    L  R N+  A+  I++AI I+     AY   G I +  G
Sbjct: 514 NQAIKLDSKLAQSYYIRGKSHLGLR-NLGSALSDIDQAIQINPEIAEAYTDKGFIHLISG 572

Query: 329 RLEEAVKCFNKALPLARDEAELS 351
           R +EA++ +  +L L      LS
Sbjct: 573 RKKEAIQFYKISLHLHLKTGNLS 595



 Score = 55.5 bits (132), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 76/358 (21%), Positives = 142/358 (39%), Gaps = 26/358 (7%)

Query: 182 CLFGQ-YEEALRNLDKTIALNPNFHVARAQRHFVVHKMIVPGDRERVEQSLKEFRNFVDT 240
           CL  + Y+EA+      I + P+ + A   R +  + +      +  + ++ +FR  +  
Sbjct: 223 CLLSKNYKEAIEFYTAIINIKPDLYPAYHYRGYAYYLL------DNYQAAIDDFRQIIHF 276

Query: 241 HSNVVEACTLFAQVLVDQEDFDGAEEYFNRSI----RVDPENASLYVHRAMLMLQARGNV 296
             + +    L   V + + D+  A E    +I     +D E   L   +   +    GN 
Sbjct: 277 KPHNLLTYLLLTSVFIKKLDYQAALEQCKIAIILNNHLDKELDILIYIQCGWIFNKIGNY 336

Query: 297 DEAIKLIEKAISIDKSCMFAYETLGTIEVQRGRLEEAVKCFNKALPLARDEAELSHIYSL 356
           +EAI+   +AI+ + +    Y   G    +  + E+A   F +A+ L  D  E    Y  
Sbjct: 337 EEAIENFNEAINCNNNDPQIYNMRGRSYYELSKYEDAFSDFTQAIELDSDYVE---AYGN 393

Query: 357 RDAAIAQMK----VCERYNIKKKVSPRSQNITKNEKLAIKQLRENNDIIIRPADKGGKTV 412
           R A   ++K      +  N   K+ P   +   N   A + L++    I        K++
Sbjct: 394 RSAVSYRLKNYRKALQDSNKALKIDPSCADAYLNRGQAREGLKQYKGAI----QDYTKSI 449

Query: 413 VMDKA---DYTQKMTSILNSNDYEIIPGDPTKTIEESEKYGNLENESG-QKHAASDFTKA 468
             D      Y  +  +     DY+    D T+ ++         N  G   +   D+ +A
Sbjct: 450 SFDPGMVLAYNNRGLAKYEIEDYQGAIEDCTEALKLDPNCALAYNNRGLAMYEIKDYHRA 509

Query: 469 FADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQRHFV 526
             D ++A K+D  +A SYY RG+ +        AL ++D+ I +NP    A   + F+
Sbjct: 510 IDDCNQAIKLDSKLAQSYYIRGKSHLGLRNLGSALSDIDQAIQINPEIAEAYTDKGFI 567



 Score = 48.5 bits (114), Expect = 0.009,   Method: Compositional matrix adjust.
 Identities = 57/293 (19%), Positives = 126/293 (43%), Gaps = 17/293 (5%)

Query: 99  LARLLRATVYIFTSQSTKAIEDL-TQLVEDTSVDPKIKVNAHIKRAVVHLHAASDFTKAF 157
           L  LL  +V+I       A+E     ++ +  +D ++ +  +I+   +  +   ++ +A 
Sbjct: 282 LTYLLLTSVFIKKLDYQAALEQCKIAIILNNHLDKELDILIYIQCGWI-FNKIGNYEEAI 340

Query: 158 ADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQRHFVVHK 217
            + +EA   + N    Y  RG+ Y    +YE+A  +  + I L+ ++  A   R  V ++
Sbjct: 341 ENFNEAINCNNNDPQIYNMRGRSYYELSKYEDAFSDFTQAIELDSDYVEAYGNRSAVSYR 400

Query: 218 MIVPGDRERVEQSLKEFRNFVDTHSNVVEACTLFAQVLVDQEDFDGAEEYFNRSIRVDPE 277
           +      +   ++L++    +    +  +A     Q     + + GA + + +SI  DP 
Sbjct: 401 L------KNYRKALQDSNKALKIDPSCADAYLNRGQAREGLKQYKGAIQDYTKSISFDPG 454

Query: 278 NASLYVHRAMLMLQARGNVDEAIKLIEKAISIDKSCMFAYETLGTIEVQRGRLEEAVKCF 337
               Y +R +   +   +   AI+   +A+ +D +C  AY   G    +      A+   
Sbjct: 455 MVLAYNNRGLAKYEIE-DYQGAIEDCTEALKLDPNCALAYNNRGLAMYEIKDYHRAIDDC 513

Query: 338 NKALPLARDEAELSHIYSLRDAAIAQMKVCERYNIKKKVSPRSQNITKNEKLA 390
           N+A+ L   +++L+  Y +R  +   ++     N+   +S   Q I  N ++A
Sbjct: 514 NQAIKL---DSKLAQSYYIRGKSHLGLR-----NLGSALSDIDQAIQINPEIA 558



 Score = 46.6 bits (109), Expect = 0.033,   Method: Compositional matrix adjust.
 Identities = 35/121 (28%), Positives = 64/121 (52%), Gaps = 8/121 (6%)

Query: 72  FEHEDYLTAIRHCTEEIESTSSNHTKALARLLRATVYIFTSQSTKAIEDLTQLVEDTSVD 131
           +E EDY  AI  CTE ++   +    ALA   R           +AI+D  Q ++   +D
Sbjct: 467 YEIEDYQGAIEDCTEALKLDPNC---ALAYNNRGLAMYEIKDYHRAIDDCNQAIK---LD 520

Query: 132 PKIKVNAHIKRAVVHLHAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEAL 191
            K+  + +I R   HL    +   A +D+D+A +++P +A++Y  +G I+ + G+ +EA+
Sbjct: 521 SKLAQSYYI-RGKSHL-GLRNLGSALSDIDQAIQINPEIAEAYTDKGFIHLISGRKKEAI 578

Query: 192 R 192
           +
Sbjct: 579 Q 579



 Score = 41.2 bits (95), Expect = 1.3,   Method: Compositional matrix adjust.
 Identities = 73/341 (21%), Positives = 125/341 (36%), Gaps = 94/341 (27%)

Query: 174 YYQRGQIYCLFGQYEEALRNLDKTIALN---PNFHVARAQRHFVVHKMIVPGDRERVEQS 230
           Y Q G I+   G YEEA+ N ++ I  N   P  +  R + ++                 
Sbjct: 323 YIQCGWIFNKIGNYEEAIENFNEAINCNNNDPQIYNMRGRSYY----------------- 365

Query: 231 LKEFRNFVDTHSNVVEACTLFAQVLVDQEDFDGAEEYFNRSIRVDPENASLYVHRAMLML 290
             E   + D  S+  +A  L         D D  E Y NRS       A  Y  +     
Sbjct: 366 --ELSKYEDAFSDFTQAIEL---------DSDYVEAYGNRS-------AVSYRLK----- 402

Query: 291 QARGNVDEAIKLIEKAISIDKSCMFAYETLG----TIEVQRGRLEEAVKC--FNKALPLA 344
               N  +A++   KA+ ID SC  AY   G     ++  +G +++  K   F+  + LA
Sbjct: 403 ----NYRKALQDSNKALKIDPSCADAYLNRGQAREGLKQYKGAIQDYTKSISFDPGMVLA 458

Query: 345 RDEAELSHIYSLRDAAIAQMKVCERYNIKKKVSPRSQNITKNEKLAIKQLRENNDIIIRP 404
            +   L+  Y + D   A     E      K+ P       N  LA+ +++         
Sbjct: 459 YNNRGLAK-YEIEDYQGAIEDCTEAL----KLDPNCALAYNNRGLAMYEIK--------- 504

Query: 405 ADKGGKTVVMDKADYTQKMTSILNSNDYEIIPGDPTKTIEESEKYGNLENESGQKHAA-S 463
                                     DY     D  + I+   K        G+ H    
Sbjct: 505 --------------------------DYHRAIDDCNQAIKLDSKLAQSYYIRGKSHLGLR 538

Query: 464 DFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALR 504
           +   A +D+D+A +++P +A++Y  +G I+ + G+ +EA++
Sbjct: 539 NLGSALSDIDQAIQINPEIAEAYTDKGFIHLISGRKKEAIQ 579


>gi|218245568|ref|YP_002370939.1| hypothetical protein PCC8801_0698 [Cyanothece sp. PCC 8801]
 gi|218166046|gb|ACK64783.1| Tetratricopeptide TPR_2 repeat protein [Cyanothece sp. PCC 8801]
          Length = 784

 Score = 70.9 bits (172), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 84/361 (23%), Positives = 155/361 (42%), Gaps = 54/361 (14%)

Query: 162 EAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQRHFVVHKMIVP 221
           EA  + PN    + + G I     QYEEA+  LDK I + PN   +   R   +  +   
Sbjct: 267 EAVDISPNYIQVWERLGFILFRIYQYEEAIFCLDKVINIKPNDDSSWHLRGLCLSSL--- 323

Query: 222 GDRERVEQSLKEFRNFVDTHSNVVEACTLFAQVLVDQEDFDGAEEYFNRSIRVDPENASL 281
               R+E++L+     ++ + N         ++L   E++  A   FNRS+ +DPEN  +
Sbjct: 324 ---GRLEEALESLDQALEVNPNDSFIWGNKGKLLNQLEEYQQALLSFNRSLELDPENDEI 380

Query: 282 YVHRAMLMLQARGNVDEAIKLIEKAISIDKSCMFAYETLGTIEVQRGRLEEAVKCFNKAL 341
           +  +  ++ + +   +EA+   +KA+ I  +   A+   G I V     ++A+  F+K +
Sbjct: 381 WYLKGKVLSELK-KYEEALNSFDKALEIHSNYYEAWGMRGVILVNLQYYKQALISFDKLI 439

Query: 342 PLARDEAELSHIYSLRDAAIAQMKVCERYNIKKKVSPRSQNITKNEKLAIKQLRENNDII 401
            +  ++ +    +  R  A+  +K             R Q   K+   A+ ++  ++D+I
Sbjct: 440 EINPNDYQ---GWLNRGIALIYLK-------------RHQEALKSLNKAL-EINSDDDMI 482

Query: 402 IRPADKGGKTVVM-DKADYTQKMTSILNSNDYEIIPGDPTKTIEESEKYGNLENESGQKH 460
                 G K VV+ +   Y + + S  N+     I  D               N+ G  H
Sbjct: 483 W-----GNKGVVLRNLGHYQEALESFDNA-----IKLD-------------FNNDRGWFH 519

Query: 461 AA------SDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNP 514
                     + +A   LD+A ++DPN  ++  ++G    L   YE+AL +  K I +NP
Sbjct: 520 KGITLIKLKQYQEALKCLDKALEIDPNDHNTLIEKGNTLYLLQCYEQALISFKKAIEVNP 579

Query: 515 N 515
           N
Sbjct: 580 N 580



 Score = 69.7 bits (169), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 96/448 (21%), Positives = 186/448 (41%), Gaps = 69/448 (15%)

Query: 118 IEDLTQLVEDTSVDPK-IKVNAHIKRAVVHLHAASDFTKAFADLDEAEKVDPNVADSYYQ 176
           IE +    E   + P  I+V   +   +  ++    + +A   LD+   + PN   S++ 
Sbjct: 259 IEGINSYYEAVDISPNYIQVWERLGFILFRIYQ---YEEAIFCLDKVINIKPNDDSSWHL 315

Query: 177 RGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQRHFVVHKM------------------ 218
           RG      G+ EEAL +LD+ + +NPN       +  +++++                  
Sbjct: 316 RGLCLSSLGRLEEALESLDQALEVNPNDSFIWGNKGKLLNQLEEYQQALLSFNRSLELDP 375

Query: 219 ----------IVPGDRERVEQSLKEFRNFVDTHSNVVEACTLFAQVLVDQEDFDGAEEYF 268
                      V  + ++ E++L  F   ++ HSN  EA  +   +LV+ + +  A   F
Sbjct: 376 ENDEIWYLKGKVLSELKKYEEALNSFDKALEIHSNYYEAWGMRGVILVNLQYYKQALISF 435

Query: 269 NRSIRVDPENASLYVHRAMLMLQARGNVDEAIKLIEKAISIDKSCMFAYETLGTIEVQRG 328
           ++ I ++P +   +++R + ++  + +  EA+K + KA+ I+      +   G +    G
Sbjct: 436 DKLIEINPNDYQGWLNRGIALIYLKRH-QEALKSLNKALEINSDDDMIWGNKGVVLRNLG 494

Query: 329 RLEEAVKCFNKALPLARDEAELSHIYSLRDAAIAQMKVCERYNIKK------KVSPRSQN 382
             +EA++ F+ A+ L     + ++        I  +K+ +     K      ++ P   N
Sbjct: 495 HYQEALESFDNAIKL-----DFNNDRGWFHKGITLIKLKQYQEALKCLDKALEIDPNDHN 549

Query: 383 --ITKNEKLAIKQLRENNDIIIRPADKGGKTVVMDKADYTQKMTSILN---SND------ 431
             I K   L + Q  E   I  + A +       D  D+      +LN   +ND      
Sbjct: 550 TLIEKGNTLYLLQCYEQALISFKKAIEVNPN---DSDDWNACGYLLLNQSSANDQPVFDI 606

Query: 432 -YEIIPGDPTKTIEESEKYGNLENESGQKHAASDFTKAFADLDEAEKVDPNVADSYYQRG 490
             EIIP   +K  + +E   +L N+   + A S F KA        ++ P+ +  +  R 
Sbjct: 607 PLEIIPIVNSKNNQLNE---SLNNQKSYQEALSYFDKAI-------ELKPDYSLVFANRS 656

Query: 491 QIYCLFGQYEEALRNLDKTIALNPNFHV 518
                 G+Y+EAL++  K I L P+  V
Sbjct: 657 FPLYYLGEYQEALKSCIKAIKLKPHKEV 684



 Score = 53.5 bits (127), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 63/280 (22%), Positives = 116/280 (41%), Gaps = 48/280 (17%)

Query: 100 ARLLRATVYIFTSQSTKAIEDLTQLVEDTSVDPKIKVNAHIKRAVVHLHAASDFTKAFAD 159
             L R    I+  +  +A++ L + +E  S D  I  N    + VV L     + +A   
Sbjct: 448 GWLNRGIALIYLKRHQEALKSLNKALEINSDDDMIWGN----KGVV-LRNLGHYQEALES 502

Query: 160 LDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQRHFVVHKMI 219
            D A K+D N    ++ +G       QY+EAL+ LDK + ++PN H    ++   ++ + 
Sbjct: 503 FDNAIKLDFNNDRGWFHKGITLIKLKQYQEALKCLDKALEIDPNDHNTLIEKGNTLYLL- 561

Query: 220 VPGDRERVEQSLKEFRNFVDTHSNVVE---ACTLFA------------------------ 252
                +  EQ+L  F+  ++ + N  +   AC                            
Sbjct: 562 -----QCYEQALISFKKAIEVNPNDSDDWNACGYLLLNQSSANDQPVFDIPLEIIPIVNS 616

Query: 253 ------QVLVDQEDFDGAEEYFNRSIRVDPENASLYVHRAMLMLQARGNVDEAIKLIEKA 306
                 + L +Q+ +  A  YF+++I + P+ + ++ +R+   L   G   EA+K   KA
Sbjct: 617 KNNQLNESLNNQKSYQEALSYFDKAIELKPDYSLVFANRSF-PLYYLGEYQEALKSCIKA 675

Query: 307 ISIDKSCMFAYETL---GTIEVQRGRLEEAVKCFNKALPL 343
           I +         TL   G I ++  R ++A+  F + L L
Sbjct: 676 IKLKPHKEVKEITLANKGFILMKLERYKQALSTFKEVLKL 715


>gi|386395126|ref|ZP_10079904.1| tetratricopeptide repeat protein [Bradyrhizobium sp. WSM1253]
 gi|385735752|gb|EIG55948.1| tetratricopeptide repeat protein [Bradyrhizobium sp. WSM1253]
          Length = 309

 Score = 70.9 bits (172), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 51/192 (26%), Positives = 93/192 (48%), Gaps = 8/192 (4%)

Query: 152 DFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQR 211
           D+ +A AD D A K+DP++A +Y  RG+     G  + A  + D  I  +P + +A A R
Sbjct: 109 DYDRAIADYDLAIKLDPSLALAYSNRGESRFNKGDLDGAFADFDAAIKRDPKYAMAYANR 168

Query: 212 HFVVHKMIVPGDRERVEQSLKEFRNFVDTHSNVVEACTLFAQVLVDQEDFDGAEEYFNRS 271
             V ++      R  +  ++ ++   +    +++ A      V  D E  D A   +  +
Sbjct: 169 ALVSYR------RRDMAHAIADYTTRIKLAPDLL-AYIDRGNVYRDSEQLDRAAADYGEA 221

Query: 272 IRVDPENASLYVHRAMLMLQARGNVDEAIKLIEKAISIDKSCMFAYETLGTIEVQRGRLE 331
           IRV P +A  + +R M+ L  +G+    +   +KA+  D S +F++   G  +++ G  +
Sbjct: 222 IRVAPTDARGWRNRGMIRLY-QGDSKGGLSDYDKALQYDPSDVFSWSNRGQAKLRLGDKQ 280

Query: 332 EAVKCFNKALPL 343
            A+  F KAL L
Sbjct: 281 GAIADFRKALEL 292



 Score = 42.4 bits (98), Expect = 0.57,   Method: Compositional matrix adjust.
 Identities = 20/56 (35%), Positives = 33/56 (58%)

Query: 468 AFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQR 523
           A +DLD+A + DP  A +Y  RG++Y     Y+ A+ + D  I L+P+  +A + R
Sbjct: 79  ALSDLDDAVRRDPGYACAYNNRGRVYSFKRDYDRAIADYDLAIKLDPSLALAYSNR 134



 Score = 40.4 bits (93), Expect = 2.4,   Method: Compositional matrix adjust.
 Identities = 22/63 (34%), Positives = 34/63 (53%)

Query: 464 DFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQR 523
           D+ +A AD D A K+DP++A +Y  RG+     G  + A  + D  I  +P + +A A R
Sbjct: 109 DYDRAIADYDLAIKLDPSLALAYSNRGESRFNKGDLDGAFADFDAAIKRDPKYAMAYANR 168

Query: 524 HFV 526
             V
Sbjct: 169 ALV 171


>gi|224588324|gb|ACN58948.1| hypothetical protein AKSOIL_0107 [uncultured bacterium BLR7]
          Length = 428

 Score = 70.9 bits (172), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 66/297 (22%), Positives = 132/297 (44%), Gaps = 20/297 (6%)

Query: 69  KRAFEHEDYLTAIRHCTEEIESTSSNHTKALARLLRATVYIFTSQSTKAIEDLTQLVEDT 128
           +R F    Y  A++  +  +E    N  +A A   R   +   +   +AI D  + +   
Sbjct: 121 ERLFREGKYAEAVQAFSRAVE-RDPNMAQAYA--FRGYTHNSLNDYDRAIADFARAI--- 174

Query: 129 SVDPKIKVNAHIKRAVVHLHAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYE 188
           ++DP     +   R +V      D+ +A AD D+A K+DP +  ++  RG +Y   G  +
Sbjct: 175 AIDPN-DATSFSDRGMV-FSNKKDYARAIADYDQAIKLDPKLTYAFNGRGTVYNALGDDD 232

Query: 189 EALRNLDKTIALNPNFHVARAQRHFVVHKMIVPGDRERVEQSLKEFRNFVDTHSNVVEAC 248
            AL + D+ I L+PN+  A   R          GD +R   ++ E+   ++       A 
Sbjct: 233 RALADYDEAIRLDPNYAEAYGNRGV---SFKAKGDNDR---AILEYSKAIELDPKFANAF 286

Query: 249 TLFAQVLVDQEDFDGAEEYFNRSIRVDPENASLYVHRAMLMLQARGNVDEAIKLIEKAIS 308
                   D+ D++ A +  ++++++DP+N   Y +R   +  A G   EA+     A++
Sbjct: 287 GNRGIAYYDKGDYEHAIQDDDQAVKLDPDNPERYNNRCYALATA-GRAQEALADCNIALA 345

Query: 309 IDKSCMFAYETLGTIEVQRGRLEEAVKCFNKALPLARDEAELSHIYSLRDAAIAQMK 365
                 F +++ G   ++ G+   +++ ++ AL L       +H  +L    +A++K
Sbjct: 346 RSPDAAFMWDSRGYAYLRLGQYRRSIEDYDAALRL-----NPTHAQALYGRGVAKLK 397



 Score = 53.5 bits (127), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 64/293 (21%), Positives = 115/293 (39%), Gaps = 42/293 (14%)

Query: 226 RVEQSLKEFRNFVDTHSNVVEACTLFAQVLVDQEDFDGAEEYFNRSIRVDPENASLYVHR 285
           +  ++++ F   V+   N+ +A            D+D A   F R+I +DP +A+ +  R
Sbjct: 128 KYAEAVQAFSRAVERDPNMAQAYAFRGYTHNSLNDYDRAIADFARAIAIDPNDATSFSDR 187

Query: 286 AMLMLQARGNVDEAIKLIEKAISIDKSCMFAYETLGTIEVQRGRLEEAVKCFNKALPLAR 345
            M+    + +   AI   ++AI +D    +A+   GT+    G  + A+  +++A+ L  
Sbjct: 188 GMVFSNKK-DYARAIADYDQAIKLDPKLTYAFNGRGTVYNALGDDDRALADYDEAIRLDP 246

Query: 346 DEAELSHIYSLRDAAIAQMKVCER----YNIKKKVSPRSQNITKNEKLAIKQLRENNDII 401
           + AE    Y  R  +       +R    Y+   ++ P+  N   N  +A           
Sbjct: 247 NYAE---AYGNRGVSFKAKGDNDRAILEYSKAIELDPKFANAFGNRGIA----------- 292

Query: 402 IRPADKGGKTVVMDKADYTQKMTSILNSNDYEIIPGDPTKTIEESEKYGNLENESGQKHA 461
                        DK DY   +      +D + +  DP    +  E+Y    N       
Sbjct: 293 -----------YYDKGDYEHAI-----QDDDQAVKLDP----DNPERY---NNRCYALAT 329

Query: 462 ASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNP 514
           A    +A AD + A    P+ A  +  RG  Y   GQY  ++ + D  + LNP
Sbjct: 330 AGRAQEALADCNIALARSPDAAFMWDSRGYAYLRLGQYRRSIEDYDAALRLNP 382



 Score = 46.6 bits (109), Expect = 0.033,   Method: Compositional matrix adjust.
 Identities = 22/60 (36%), Positives = 35/60 (58%)

Query: 464 DFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQR 523
           D+ +A AD D+A K+DP +  ++  RG +Y   G  + AL + D+ I L+PN+  A   R
Sbjct: 196 DYARAIADYDQAIKLDPKLTYAFNGRGTVYNALGDDDRALADYDEAIRLDPNYAEAYGNR 255



 Score = 45.4 bits (106), Expect = 0.069,   Method: Compositional matrix adjust.
 Identities = 63/249 (25%), Positives = 97/249 (38%), Gaps = 48/249 (19%)

Query: 286 AMLMLQARGNVDEAIKLIEKAISIDKSCMFAYETLGTIEVQRGRLEEAVKCFNKALPLAR 345
           AML LQ   +      +    I+ +     AY+    +  + G+  EAV+ F++A+    
Sbjct: 86  AMLFLQGAADPPSPSSVAAAPITANTEAAAAYQDCERL-FREGKYAEAVQAFSRAVE--- 141

Query: 346 DEAELSHIYSLRDAAIAQMKVCERYNIKKKVSPRSQNITKNEKLAIKQLRENNDIIIRP- 404
                      RD  +AQ      Y         + N   +   AI        I I P 
Sbjct: 142 -----------RDPNMAQAYAFRGY---------THNSLNDYDRAIADFARA--IAIDPN 179

Query: 405 -----ADKGGKTVVMDKADYTQKMTSILNSNDY-EIIPGDPTKTIEESEKYGNLENESGQ 458
                +D+G   V  +K DY + +       DY + I  DP  T   + + G + N  G 
Sbjct: 180 DATSFSDRG--MVFSNKKDYARAIA------DYDQAIKLDPKLTYAFNGR-GTVYNALG- 229

Query: 459 KHAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHV 518
                D  +A AD DEA ++DPN A++Y  RG  +   G  + A+    K I L+P F  
Sbjct: 230 -----DDDRALADYDEAIRLDPNYAEAYGNRGVSFKAKGDNDRAILEYSKAIELDPKFAN 284

Query: 519 ARAQRHFVW 527
           A   R   +
Sbjct: 285 AFGNRGIAY 293



 Score = 39.7 bits (91), Expect = 3.9,   Method: Compositional matrix adjust.
 Identities = 23/77 (29%), Positives = 38/77 (49%)

Query: 463 SDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQ 522
           +D+ +A AD   A  +DPN A S+  RG ++     Y  A+ + D+ I L+P    A   
Sbjct: 161 NDYDRAIADFARAIAIDPNDATSFSDRGMVFSNKKDYARAIADYDQAIKLDPKLTYAFNG 220

Query: 523 RHFVWTSTLAELMAFSD 539
           R  V+ +   +  A +D
Sbjct: 221 RGTVYNALGDDDRALAD 237



 Score = 39.7 bits (91), Expect = 4.6,   Method: Compositional matrix adjust.
 Identities = 53/271 (19%), Positives = 104/271 (38%), Gaps = 51/271 (18%)

Query: 264 AEEYFNRSIRVDPENASLYVHRAMLMLQARGNVDEAIKLIEKAISIDKSCMFAYETLGTI 323
           A + F+R++  DP  A  Y  R      +  + D AI    +AI+ID +   ++   G +
Sbjct: 132 AVQAFSRAVERDPNMAQAYAFRGYTH-NSLNDYDRAIADFARAIAIDPNDATSFSDRGMV 190

Query: 324 EVQRGRLEEAVKCFNKALPLARDEAELSHIYSLRDAAIAQMKVCER----YNIKKKVSPR 379
              +     A+  +++A+ L   + +L++ ++ R      +   +R    Y+   ++ P 
Sbjct: 191 FSNKKDYARAIADYDQAIKL---DPKLTYAFNGRGTVYNALGDDDRALADYDEAIRLDPN 247

Query: 380 SQNITKNEKLAIKQLRENNDIIIRPADKGGKTVVMDKADYTQKMTSILNSNDYEIIPGDP 439
                 N  ++ K   +N+  I+                                   + 
Sbjct: 248 YAEAYGNRGVSFKAKGDNDRAIL-----------------------------------EY 272

Query: 440 TKTIEESEKYGN-LENESGQKHAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQ 498
           +K IE   K+ N   N     +   D+  A  D D+A K+DP+  + Y  R       G+
Sbjct: 273 SKAIELDPKFANAFGNRGIAYYDKGDYEHAIQDDDQAVKLDPDNPERYNNRCYALATAGR 332

Query: 499 YEEALRNLDKTIALNPNFHVARAQRHFVWTS 529
            +EAL + +  +A +P+         F+W S
Sbjct: 333 AQEALADCNIALARSPD-------AAFMWDS 356


>gi|428317099|ref|YP_007114981.1| serine/threonine protein kinase [Oscillatoria nigro-viridis PCC
           7112]
 gi|428240779|gb|AFZ06565.1| serine/threonine protein kinase [Oscillatoria nigro-viridis PCC
           7112]
          Length = 804

 Score = 70.9 bits (172), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 103/489 (21%), Positives = 177/489 (36%), Gaps = 65/489 (13%)

Query: 68  AKRAFEHEDYLTAIRHCTEEIESTSSNHTKALARLLRAT----------VYIFTSQSTKA 117
           AKR    E+ L A+       E  ++ H K++A  L ++           ++       A
Sbjct: 336 AKRYQSAEEVLVALSKLRHRQEPVNTAHKKSIAPSLMSSDSFYSRLGSRFWLLILAGVGA 395

Query: 118 IEDLTQLVEDTSVDPKIKVNAHIKRAVVHLHAASDFTKAFADLDEAEKVDPNVADSYYQR 177
              L  L    S    IK   + ++ V       D   A    +++ +++P  A+S+Y R
Sbjct: 396 AIVLIFLFSYWSRPNPIKAKEYYEKGV-EKSRNQDAAAALQAFNKSIQLNPKNAESFYWR 454

Query: 178 GQIYCLFGQYEEALRNLDKTIALNPNFHVARAQRHFVVHKMIVPGDRERVEQSLKEFRNF 237
           G       +Y+EA+ +  + IALNP +  A   R    H                     
Sbjct: 455 GNANYDLKKYQEAIADYSQAIALNPKYVQAYFNRGLARH--------------------- 493

Query: 238 VDTHSNVVEACTLFAQVLVDQEDFDGAEEYFNRSIRVDPENASLYVHRAMLMLQARGNVD 297
                              D  D  GA E + +++ + P +A  Y  R +  L+ + +  
Sbjct: 494 -------------------DFNDKRGAIEDYTQALNLQPNDADTYYERGVTYLELQ-DYK 533

Query: 298 EAIKLIEKAISIDKSCMFAYETLGTIEVQRGRLEEAVKCFNKALPLARDEAELSHIYSLR 357
            AI+     I +  + + AY + G      G L+  +  + +A+ L  D   +   YS  
Sbjct: 534 TAIQDFNAVIRLQPNLVKAYHSRGLARAGSGDLQGGIGDYTEAIKL--DAKNVDAFYSRG 591

Query: 358 DAAIA---QMKVCERYNIKKKVSPRSQNITKNEKLAIKQLRENNDIIIRPADKGGKTVVM 414
            A             Y+    + P+S +   N       L  +   I    D   + + +
Sbjct: 592 RARFHLGDYQGALADYSQVIAIDPKSADAYANRCSTQLNLGAHQAAI----DDCTQAISL 647

Query: 415 ---DKADYTQKMTSILNSNDYEIIPGDPTKTIE-ESEKYGNLENESGQKHAASDFTKAFA 470
              D   Y  +  + LN  DY     D T+ ++     Y    N +  + A  D   A A
Sbjct: 648 SDEDGVPYNNRCIAYLNLKDYPKAIADCTQALKVNPNDYNAYNNRALARSAGGDAQGAIA 707

Query: 471 DLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQRHFVWTST 530
           D   A   +PN A++Y  R +IY     Y  A+ +  + I ++PN+  A   R  V  S 
Sbjct: 708 DFTAAIGFNPNNAEAYANRAKIYQELKNYNSAIADYVQAIRISPNYAAAYYGRGLVRRSL 767

Query: 531 LAELMAFSD 539
             +  A SD
Sbjct: 768 GDKAGAISD 776



 Score = 58.2 bits (139), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 91/396 (22%), Positives = 152/396 (38%), Gaps = 83/396 (20%)

Query: 116 KAIEDLTQLVEDTSVDPKIKVNAHIKRAVVHLHAASDFTKAFADLDEAEKVDPNVADSYY 175
           +AI D +Q +   +++PK  V A+  R +   H  +D   A  D  +A  + PN AD+YY
Sbjct: 466 EAIADYSQAI---ALNPKY-VQAYFNRGLAR-HDFNDKRGAIEDYTQALNLQPNDADTYY 520

Query: 176 QRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQRHFVVHKMIVPGDRERVEQSLKEFR 235
           +RG  Y     Y+ A+++ +  I L PN   A   R          GD   ++  + ++ 
Sbjct: 521 ERGVTYLELQDYKTAIQDFNAVIRLQPNLVKAYHSRGLA---RAGSGD---LQGGIGDYT 574

Query: 236 NFVDTHSNVVEACTLFAQVLVDQEDFDGAEEYFNRSIRVDPENASLYVHRAMLMLQARGN 295
             +   +  V+A     +      D+ GA   +++ I +DP++A  Y +R    L   G 
Sbjct: 575 EAIKLDAKNVDAFYSRGRARFHLGDYQGALADYSQVIAIDPKSADAYANRCSTQLNL-GA 633

Query: 296 VDEAIKLIEKAISIDKSCMFAYETLGTIEVQRGRLEEAVKCFNKALPLARDEAELSHIYS 355
              AI    +AIS+                     E+ V   N+ +             +
Sbjct: 634 HQAAIDDCTQAISLSD-------------------EDGVPYNNRCIAY----------LN 664

Query: 356 LRD--AAIAQMKVCERYNIKKKVSPRSQNITKNEKLAIKQLRENNDIIIRPADKGGKTVV 413
           L+D   AIA    C +     KV+P   N   N  LA            R A    +  +
Sbjct: 665 LKDYPKAIAD---CTQ---ALKVNPNDYNAYNNRALA------------RSAGGDAQGAI 706

Query: 414 MDKADYTQKMTSILNSNDYEIIPGDPTKTIEESEKYGNLENESGQKHAASDFTKAFADLD 473
            D        T+ +  N     P +       ++ Y  L+N          +  A AD  
Sbjct: 707 AD-------FTAAIGFN-----PNNAEAYANRAKIYQELKN----------YNSAIADYV 744

Query: 474 EAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKT 509
           +A ++ PN A +YY RG +    G    A+ +L+K 
Sbjct: 745 QAIRISPNYAAAYYGRGLVRRSLGDKAGAISDLEKA 780



 Score = 44.7 bits (104), Expect = 0.14,   Method: Compositional matrix adjust.
 Identities = 64/273 (23%), Positives = 110/273 (40%), Gaps = 57/273 (20%)

Query: 54  GDTNESHELD------LLSKAKRAFEHEDYLTAIRHCTEEIESTSSNHTKALARLLRATV 107
           GD  E+ +LD        S+ +  F   DY  A+   ++ I   + +   A A   R + 
Sbjct: 571 GDYTEAIKLDAKNVDAFYSRGRARFHLGDYQGALADYSQVI---AIDPKSADAYANRCST 627

Query: 108 YIFTSQSTKAIEDLTQLVEDTSVDPKIKVNAHIKRAVVHLHAASDFTKAFADLDEAEKVD 167
            +       AI+D TQ +  +  D  +  N    R + +L+   D+ KA AD  +A KV+
Sbjct: 628 QLNLGAHQAAIDDCTQAISLSDED-GVPYN---NRCIAYLNL-KDYPKAIADCTQALKVN 682

Query: 168 PNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQRHFVVHKMIVPGDRERV 227
           PN  ++Y  R       G  + A+ +    I  NPN   A A             +R ++
Sbjct: 683 PNDYNAYNNRALARSAGGDAQGAIADFTAAIGFNPNNAEAYA-------------NRAKI 729

Query: 228 EQSLKEFRNFVDTHSNVVEACTLFAQVLVDQEDFDGAEEYFNRSIRVDPENASLYVHRAM 287
            Q LK + + +   ++ V+A                        IR+ P  A+ Y  R  
Sbjct: 730 YQELKNYNSAI---ADYVQA------------------------IRISPNYAAAYYGRG- 761

Query: 288 LMLQARGNVDEAIKLIEKA--ISIDKSCMFAYE 318
           L+ ++ G+   AI  +EKA  + +D+     Y+
Sbjct: 762 LVRRSLGDKAGAISDLEKAGKMYLDQGLTGGYK 794



 Score = 39.3 bits (90), Expect = 5.4,   Method: Compositional matrix adjust.
 Identities = 35/140 (25%), Positives = 53/140 (37%), Gaps = 10/140 (7%)

Query: 415 DKADYTQKMTSILNSNDYEIIPGDPTKTIEESEKYGNLENESGQKHAAS-DFTKAFADLD 473
           D   Y ++  + L   DY+    D    I          +  G   A S D      D  
Sbjct: 515 DADTYYERGVTYLELQDYKTAIQDFNAVIRLQPNLVKAYHSRGLARAGSGDLQGGIGDYT 574

Query: 474 EAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQR---------H 524
           EA K+D    D++Y RG+     G Y+ AL +  + IA++P    A A R         H
Sbjct: 575 EAIKLDAKNVDAFYSRGRARFHLGDYQGALADYSQVIAIDPKSADAYANRCSTQLNLGAH 634

Query: 525 FVWTSTLAELMAFSDEFMIP 544
                   + ++ SDE  +P
Sbjct: 635 QAAIDDCTQAISLSDEDGVP 654


>gi|440684109|ref|YP_007158904.1| serine/threonine protein kinase with TPR repeats [Anabaena
           cylindrica PCC 7122]
 gi|428681228|gb|AFZ59994.1| serine/threonine protein kinase with TPR repeats [Anabaena
           cylindrica PCC 7122]
          Length = 706

 Score = 70.9 bits (172), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 80/374 (21%), Positives = 153/374 (40%), Gaps = 54/374 (14%)

Query: 153 FTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQRH 212
           +  A A  ++A  + PN   ++Y +G+      +Y+E+L   DK I L PN+  A   R 
Sbjct: 349 YEDALAVYEKAANIKPNYFQAWYGQGKALFKLQKYQESLLAYDKAIQLQPNYLEAWTDRG 408

Query: 213 FVVHKMIVPGDRERVEQSLKEFRNFVDTHSNVVEACTLFAQVLVDQEDFDGAEEYFNRSI 272
           FV+  +      +R  +++  F   +    +             + + +D A + +N++I
Sbjct: 409 FVLSHL------QRYSEAIFAFDKGLQIKEDYPALWDAKGDAFKNLKQYDNAIKSYNQAI 462

Query: 273 RVDPENASLYVHRAMLMLQARGNVDEAIKLIEKAISIDKSCMFAYETLGTIEVQRGRLEE 332
            + P+N  ++  +  L LQ+    D+AI    KA+ +      A    G   V   R E+
Sbjct: 463 ELQPDNYEIWYKKGFL-LQSLKQYDDAITAYIKAVELKPDYEAALYNWGNSLVNLNRYED 521

Query: 333 AVKCFNKALPLARD--EAELSH---IYSLR--DAAIAQMKVCERYNIKKKVSPRSQNITK 385
           A+K +++ +    +  +A  S    + +LR    AI   K   +YN      P +     
Sbjct: 522 ALKAYSQLVQYKPNHYQAWFSRGNSLITLRRYSEAIDSFKEVIKYN------PSNYQAWY 575

Query: 386 NEKLAIKQLRENNDIIIRPADKGGKTVVMDKADYTQKMTSILNSNDYEIIPGDPTKTIEE 445
           +   A+ Q +   + I                 Y + ++  L SNDY++           
Sbjct: 576 SLGWALHQSQRYAEAI---------------ESYNKAIS--LKSNDYKV----------- 607

Query: 446 SEKYGNLENESGQKHAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRN 505
              + NL N    ++    +  A A  ++A +   N  +S+Y RG       QY+EA+ +
Sbjct: 608 ---WYNLGNS---QYNLQKYADALAAYNKAVRYQKNHYESWYSRGNTLLNLKQYQEAIAS 661

Query: 506 LDKTIALNPNFHVA 519
            ++ I   P++  A
Sbjct: 662 YEQAIKYKPDYQQA 675



 Score = 40.4 bits (93), Expect = 2.5,   Method: Compositional matrix adjust.
 Identities = 23/75 (30%), Positives = 38/75 (50%), Gaps = 4/75 (5%)

Query: 465 FTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQRH 524
           +  A A  ++A  + PN   ++Y +G+      +Y+E+L   DK I L PN+  A   R 
Sbjct: 349 YEDALAVYEKAANIKPNYFQAWYGQGKALFKLQKYQESLLAYDKAIQLQPNYLEAWTDRG 408

Query: 525 FVWTSTLAELMAFSD 539
           FV    L+ L  +S+
Sbjct: 409 FV----LSHLQRYSE 419


>gi|425452343|ref|ZP_18832160.1| Tetratricopeptide repeat protein (fragment) [Microcystis aeruginosa
           PCC 7941]
 gi|389765891|emb|CCI08329.1| Tetratricopeptide repeat protein (fragment) [Microcystis aeruginosa
           PCC 7941]
          Length = 436

 Score = 70.5 bits (171), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 88/373 (23%), Positives = 160/373 (42%), Gaps = 38/373 (10%)

Query: 171 ADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQRHFVVHKMIVPGDRERVEQS 230
           A  +Y RG  Y    +Y+ AL    K I +NP +  A   R F+  +      +E+ + +
Sbjct: 45  AIGHYNRGVDYIQQEKYDLALAEFTKAININPRYAEAYLNRGFLYEQ------QEKPDLA 98

Query: 231 LKEFRNFVDTHSNVVEACTLFAQVLVDQEDFDGAEEYFNRSIRVDPENASLYVHRAMLML 290
           L +F   ++ +  + EA      +  +Q   D A   FN+++ ++P NA+ Y +R  L  
Sbjct: 99  LSDFNQAININPRLAEAYNNRGLLYYEQGKSDLALSDFNQALNINPRNATAYYNRGNLY- 157

Query: 291 QARGNVDEAIKLIEKAISIDKSCMFAYETLGTIEVQRGRLEEAVKCFNKAL---PLAR-- 345
           + +G  D A+    +A++I+     AY   G +  ++G+ + A+  +N+AL   PL    
Sbjct: 158 KEQGKPDLALFDYNQALNINPRDAEAYLNRGFLYHEQGKPDLALFDYNQALNINPLYALA 217

Query: 346 --DEAELSHIYSLRDAAIAQMKVCERYNIKKKVSPRSQNITKNE--KLAIKQLRENNDII 401
             +   L H     D A++        N +  ++  ++ +   +  KL +     N  I 
Sbjct: 218 YLNRGNLYHEQGKPDLALSDFNQAININPRYAMAYNNRGLLYQQQGKLNLALFDYNQAIN 277

Query: 402 IRP------ADKGGKTVVMDKADYT-QKMTSILNSNDYEIIPGDPTKTIEESEKYGNLEN 454
           I P       ++G    V  K D         +N N          +  E     G L  
Sbjct: 278 INPRYAMAYLNRGVLYAVQGKPDLALSDFNQAININ---------PRLAEAYNNRGLLYY 328

Query: 455 ESGQKHAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNP 514
           E G+    SD   A +D ++A  ++P  A +Y  RG +Y + G+ + AL + ++ I +NP
Sbjct: 329 EQGK----SDL--ALSDYNQAININPGYAQAYLNRGVLYAVQGKPDLALSDYNQAININP 382

Query: 515 NFHVARAQRHFVW 527
               A A R  ++
Sbjct: 383 REAQAYANRGVLY 395



 Score = 69.3 bits (168), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 66/270 (24%), Positives = 128/270 (47%), Gaps = 17/270 (6%)

Query: 73  EHEDYLTAIRHCTEEIESTSSNHTKALARLLRATVYIFTSQSTKAIEDLTQLVEDTSVDP 132
           + E Y  A+   T+ I   + N   A A L R  +Y    +   A+ D  Q +   +++P
Sbjct: 57  QQEKYDLALAEFTKAI---NINPRYAEAYLNRGFLYEQQEKPDLALSDFNQAI---NINP 110

Query: 133 KIKVNAHIKRAVVHL-HAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEAL 191
           ++   A+  R +++     SD   A +D ++A  ++P  A +YY RG +Y   G+ + AL
Sbjct: 111 RL-AEAYNNRGLLYYEQGKSDL--ALSDFNQALNINPRNATAYYNRGNLYKEQGKPDLAL 167

Query: 192 RNLDKTIALNPNFHVARAQRHFVVHKMIVPGDRERVEQSLKEFRNFVDTHSNVVEACTLF 251
            + ++ + +NP    A   R F+ H+   P      + +L ++   ++ +     A    
Sbjct: 168 FDYNQALNINPRDAEAYLNRGFLYHEQGKP------DLALFDYNQALNINPLYALAYLNR 221

Query: 252 AQVLVDQEDFDGAEEYFNRSIRVDPENASLYVHRAMLMLQARGNVDEAIKLIEKAISIDK 311
             +  +Q   D A   FN++I ++P  A  Y +R +L  Q +G ++ A+    +AI+I+ 
Sbjct: 222 GNLYHEQGKPDLALSDFNQAININPRYAMAYNNRGLLY-QQQGKLNLALFDYNQAININP 280

Query: 312 SCMFAYETLGTIEVQRGRLEEAVKCFNKAL 341
               AY   G +   +G+ + A+  FN+A+
Sbjct: 281 RYAMAYLNRGVLYAVQGKPDLALSDFNQAI 310



 Score = 54.7 bits (130), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 55/261 (21%), Positives = 107/261 (40%), Gaps = 46/261 (17%)

Query: 89  ESTSSNHTKALARLLRATVYIFTSQSTKAIEDLTQLVEDTSVDPKIKVNAHIKRAVVHLH 148
           ++ + N   ALA L R  +Y    +   A+ D  Q +   +++P+  + A+  R +++  
Sbjct: 206 QALNINPLYALAYLNRGNLYHEQGKPDLALSDFNQAI---NINPRYAM-AYNNRGLLY-Q 260

Query: 149 AASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVAR 208
                  A  D ++A  ++P  A +Y  RG +Y + G+ + AL + ++ I +NP    A 
Sbjct: 261 QQGKLNLALFDYNQAININPRYAMAYLNRGVLYAVQGKPDLALSDFNQAININPRLAEAY 320

Query: 209 AQRHFVVHKMIVPGDRERVEQSLKEFRNFVDTHSNVVEACTLFAQVLVDQEDFDGAEEYF 268
             R  + +                                        +Q   D A   +
Sbjct: 321 NNRGLLYY----------------------------------------EQGKSDLALSDY 340

Query: 269 NRSIRVDPENASLYVHRAMLMLQARGNVDEAIKLIEKAISIDKSCMFAYETLGTIEVQRG 328
           N++I ++P  A  Y++R +L    +G  D A+    +AI+I+     AY   G +   R 
Sbjct: 341 NQAININPGYAQAYLNRGVLY-AVQGKPDLALSDYNQAININPREAQAYANRGVLYYYRQ 399

Query: 329 RLEEAVKCFNKALPLARDEAE 349
             E+A++   +A  L R + +
Sbjct: 400 EREKAIRDLRQAAELFRQQGD 420


>gi|67920262|ref|ZP_00513782.1| TPR repeat:Sel1-like repeat:Sel1-like repeat [Crocosphaera watsonii
           WH 8501]
 gi|67857746|gb|EAM52985.1| TPR repeat:Sel1-like repeat:Sel1-like repeat [Crocosphaera watsonii
           WH 8501]
          Length = 353

 Score = 70.5 bits (171), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 64/262 (24%), Positives = 115/262 (43%), Gaps = 27/262 (10%)

Query: 103 LRATVYIFTSQSTKAIEDLTQLVEDTSVDPKIKVNAHIKRAVVH---------------L 147
           L AT Y+  +QS   IE L Q       + + +    I R ++                L
Sbjct: 14  LVATPYVGMTQS---IEQLFQQGNQAQNEGRYREAESIWRQIISIDSNNAIAYFYIGLAL 70

Query: 148 HAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVA 207
                  +A A   +A ++DPN + +Y   G      G+ EEA+    K I L+PN    
Sbjct: 71  RKQGKLEEATAAYKKAIELDPNYSFAYNNMGNALRKQGKLEEAIAAYKKAIELDPN---- 126

Query: 208 RAQRHFVVHKM-IVPGDRERVEQSLKEFRNFVDTHSNVVEACTLFAQVLVDQEDFDGAEE 266
                F  + M +   D+ ++E+++  ++  ++   N   A       L  Q   + A  
Sbjct: 127 ---DAFAYNNMGLALDDQGKLEEAIAAYKKAIELDPNYATAYYNMGNALNRQGKLEEAIA 183

Query: 267 YFNRSIRVDPENASLYVHRAMLMLQARGNVDEAIKLIEKAISIDKSCMFAYETLGTIEVQ 326
            + ++I +DP N S   +   + L+ +G  DEAI   +KAI I+ +  FAY  +G    +
Sbjct: 184 AYKKAIELDP-NYSFAYNNMGVALRKQGKYDEAIAAYKKAIEINPNYAFAYNNMGVALRK 242

Query: 327 RGRLEEAVKCFNKALPLARDEA 348
           +G+ +EA+  + KA+ +  ++A
Sbjct: 243 QGKYDEAIAAYKKAIEINPNDA 264



 Score = 64.7 bits (156), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 50/195 (25%), Positives = 90/195 (46%), Gaps = 7/195 (3%)

Query: 147 LHAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHV 206
           L       +A A   +A ++DPN A +Y   G      G+ EEA+    K I L+PN+  
Sbjct: 104 LRKQGKLEEAIAAYKKAIELDPNDAFAYNNMGLALDDQGKLEEAIAAYKKAIELDPNYAT 163

Query: 207 ARAQRHFVVHKMIVPGDRERVEQSLKEFRNFVDTHSNVVEACTLFAQVLVDQEDFDGAEE 266
           A       +++      + ++E+++  ++  ++   N   A       L  Q  +D A  
Sbjct: 164 AYYNMGNALNR------QGKLEEAIAAYKKAIELDPNYSFAYNNMGVALRKQGKYDEAIA 217

Query: 267 YFNRSIRVDPENASLYVHRAMLMLQARGNVDEAIKLIEKAISIDKSCMFAYETLGTIEVQ 326
            + ++I ++P  A  Y +   + L+ +G  DEAI   +KAI I+ +  F Y  +G     
Sbjct: 218 AYKKAIEINPNYAFAYNNMG-VALRKQGKYDEAIAAYKKAIEINPNDAFGYNNMGLALDD 276

Query: 327 RGRLEEAVKCFNKAL 341
           +G+ +EA+    KAL
Sbjct: 277 QGKYDEAIAAHKKAL 291



 Score = 60.8 bits (146), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 45/170 (26%), Positives = 79/170 (46%), Gaps = 7/170 (4%)

Query: 155 KAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQRHFV 214
           +A A   +A ++DPN A +YY  G      G+ EEA+    K I L+PN+  A       
Sbjct: 146 EAIAAYKKAIELDPNYATAYYNMGNALNRQGKLEEAIAAYKKAIELDPNYSFAYNNMGVA 205

Query: 215 VHKMIVPGDRERVEQSLKEFRNFVDTHSNVVEACTLFAQVLVDQEDFDGAEEYFNRSIRV 274
           + K      + + ++++  ++  ++ + N   A       L  Q  +D A   + ++I +
Sbjct: 206 LRK------QGKYDEAIAAYKKAIEINPNYAFAYNNMGVALRKQGKYDEAIAAYKKAIEI 259

Query: 275 DPENASLYVHRAMLMLQARGNVDEAIKLIEKAISIDKSCMFAYETLGTIE 324
           +P +A  Y +   L L  +G  DEAI   +KA+ ID + + A   L   E
Sbjct: 260 NPNDAFGYNNMG-LALDDQGKYDEAIAAHKKALEIDPNLVLAQNNLKEAE 308



 Score = 55.5 bits (132), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 77/332 (23%), Positives = 135/332 (40%), Gaps = 49/332 (14%)

Query: 197 TIALNPNFHVARAQRHFVVHKMIVPGDRERVEQSLKE----FRNFVDTHSNVVEACTLFA 252
           T++L    +V   Q    + ++   G++ + E   +E    +R  +   SN   A     
Sbjct: 11  TVSLVATPYVGMTQS---IEQLFQQGNQAQNEGRYREAESIWRQIISIDSNNAIAYFYIG 67

Query: 253 QVLVDQEDFDGAEEYFNRSIRVDPENASLYVHRAMLMLQARGNVDEAIKLIEKAISIDKS 312
             L  Q   + A   + ++I +DP N S   +     L+ +G ++EAI   +KAI +D +
Sbjct: 68  LALRKQGKLEEATAAYKKAIELDP-NYSFAYNNMGNALRKQGKLEEAIAAYKKAIELDPN 126

Query: 313 CMFAYETLGTIEVQRGRLEEAVKCFNKALPLARDEAELSHIYSLRDAAIAQMKVCERYNI 372
             FAY  +G     +G+LEEA+  + KA+ L  D    +  Y++ +A   Q K+ E    
Sbjct: 127 DAFAYNNMGLALDDQGKLEEAIAAYKKAIEL--DPNYATAYYNMGNALNRQGKLEEAIAA 184

Query: 373 KKK---VSPRSQNITKNEKLAIKQLRENNDIIIRPADKGGKTVVMDKADYTQKMTSILNS 429
            KK   + P       N  +A++              K GK        Y + + +    
Sbjct: 185 YKKAIELDPNYSFAYNNMGVALR--------------KQGK--------YDEAIAAY--- 219

Query: 430 NDYEIIPGDPTKTIEESEKYGNLENESGQK-HAASDFTKAFADLDEAEKVDPNVADSYYQ 488
                      K IE +  Y    N  G        + +A A   +A +++PN A  Y  
Sbjct: 220 ----------KKAIEINPNYAFAYNNMGVALRKQGKYDEAIAAYKKAIEINPNDAFGYNN 269

Query: 489 RGQIYCLFGQYEEALRNLDKTIALNPNFHVAR 520
            G      G+Y+EA+    K + ++PN  +A+
Sbjct: 270 MGLALDDQGKYDEAIAAHKKALEIDPNLVLAQ 301


>gi|445062671|ref|ZP_21375019.1| hypothetical protein H263_04638, partial [Brachyspira hampsonii
           30599]
 gi|444505943|gb|ELV06357.1| hypothetical protein H263_04638, partial [Brachyspira hampsonii
           30599]
          Length = 324

 Score = 70.5 bits (171), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 75/325 (23%), Positives = 141/325 (43%), Gaps = 54/325 (16%)

Query: 63  DLLSKAKRAFEHEDYLTAIRHCTEEIESTSSNHTKALARLLRATVYIFTSQSTK-AIEDL 121
           +  +KA  AF++++Y  AI + +E I+  S+ +     R   A   I    S K A+ED 
Sbjct: 8   NFFNKAYDAFKNKNYNLAIEYFSEVIKLDSTIYEAYYNRA-NAKANIDNENSYKSAVEDY 66

Query: 122 TQLVEDTS-------------------------VDPKIKVNAHIKRAVVHLHAAS----- 151
           T  ++                             D  I++N +++ A  ++ A +     
Sbjct: 67  TWALKLNDKFAAAYYNRGIINRSLGNTENALKDFDKAIELNYNLEEAY-YVRANTKASLK 125

Query: 152 DFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQR 211
           D+  +  D ++A +V P+ AD+YY R       G+Y+EA+++ DK I  N +F       
Sbjct: 126 DYKGSIEDYNKAIEVYPHFADAYYNRALSKNALGEYKEAIKDYDKAIEYNSHF------- 178

Query: 212 HFVVHKMIVPGDRERVEQSLKEFRNFVDTHSNVVEACTLFAQVLVDQ-------EDFDGA 264
                 +    +R  V++ L  +   +D ++N +     FA    ++       +D+ GA
Sbjct: 179 ------IDAYNNRGNVKEKLGNYNEAIDDYTNAIHINREFADGYFNRANAKFHIKDYKGA 232

Query: 265 EEYFNRSIRVDPENASLYVHRAMLMLQARGNVDEAIKLIEKAISIDKSCMFAYETLGTIE 324
            E F+  I++ P     Y++R ++ +       EAIK  +K I +D +   AY       
Sbjct: 233 VEDFDELIKIAPNYLKAYLNRGIIAMTMEA-YQEAIKDFDKVIELDPNIADAYYNKAVAL 291

Query: 325 VQRGRLEEAVKCFNKALPLARDEAE 349
              G  +EA+  +++A+ L  D +E
Sbjct: 292 NHLGIYDEAILYYDQAIKLNPDYSE 316



 Score = 63.5 bits (153), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 69/266 (25%), Positives = 114/266 (42%), Gaps = 13/266 (4%)

Query: 258 QEDFDGAEEYFNRSIRVDPENASLYVHRAMLMLQARGNVDE------AIKLIEKAISIDK 311
            ++++ A EYF+  I++D      Y +RA     A+ N+D       A++    A+ ++ 
Sbjct: 19  NKNYNLAIEYFSEVIKLDSTIYEAYYNRA----NAKANIDNENSYKSAVEDYTWALKLND 74

Query: 312 SCMFAYETLGTIEVQRGRLEEAVKCFNKALPLARDEAELSHIYSLRDAAIAQMK-VCERY 370
               AY   G I    G  E A+K F+KA+ L  +  E  ++ +   A++   K   E Y
Sbjct: 75  KFAAAYYNRGIINRSLGNTENALKDFDKAIELNYNLEEAYYVRANTKASLKDYKGSIEDY 134

Query: 371 NIKKKVSPRSQNITKNEKLAIKQLRENNDIIIRPADKGGKTVVMDKADYTQKMTSILNSN 430
           N   +V P   +   N  L+   L E  + I +  DK  +        Y  +        
Sbjct: 135 NKAIEVYPHFADAYYNRALSKNALGEYKEAI-KDYDKAIEYNSHFIDAYNNRGNVKEKLG 193

Query: 431 DYEIIPGDPTKTIEESEKYGN-LENESGQKHAASDFTKAFADLDEAEKVDPNVADSYYQR 489
           +Y     D T  I  + ++ +   N +  K    D+  A  D DE  K+ PN   +Y  R
Sbjct: 194 NYNEAIDDYTNAIHINREFADGYFNRANAKFHIKDYKGAVEDFDELIKIAPNYLKAYLNR 253

Query: 490 GQIYCLFGQYEEALRNLDKTIALNPN 515
           G I      Y+EA+++ DK I L+PN
Sbjct: 254 GIIAMTMEAYQEAIKDFDKVIELDPN 279



 Score = 46.6 bits (109), Expect = 0.034,   Method: Compositional matrix adjust.
 Identities = 60/271 (22%), Positives = 127/271 (46%), Gaps = 11/271 (4%)

Query: 252 AQVLVDQED-FDGAEEYFNRSIRVDPENASLYVHRAMLMLQARGNVDEAIKLIEKAISID 310
           A+  +D E+ +  A E +  +++++ + A+ Y +R ++  ++ GN + A+K  +KAI ++
Sbjct: 49  AKANIDNENSYKSAVEDYTWALKLNDKFAAAYYNRGIIN-RSLGNTENALKDFDKAIELN 107

Query: 311 KSCMFAYETLGTIEVQRGRLEEAVKCFNKALPLARDEAELSHIYSLRDAAIAQMKVCERY 370
            +   AY      +      + +++ +NKA+ +    A+  +  +L   A+ + K   + 
Sbjct: 108 YNLEEAYYVRANTKASLKDYKGSIEDYNKAIEVYPHFADAYYNRALSKNALGEYKEAIK- 166

Query: 371 NIKKKVSPRSQNI-TKNEKLAIKQLRENNDIIIRPADKGGKTVVMDK--AD-YTQKMTSI 426
           +  K +   S  I   N +  +K+   N +  I   D     + +++  AD Y  +  + 
Sbjct: 167 DYDKAIEYNSHFIDAYNNRGNVKEKLGNYNEAI---DDYTNAIHINREFADGYFNRANAK 223

Query: 427 LNSNDYEIIPGDPTKTIEESEKY-GNLENESGQKHAASDFTKAFADLDEAEKVDPNVADS 485
            +  DY+    D  + I+ +  Y     N          + +A  D D+  ++DPN+AD+
Sbjct: 224 FHIKDYKGAVEDFDELIKIAPNYLKAYLNRGIIAMTMEAYQEAIKDFDKVIELDPNIADA 283

Query: 486 YYQRGQIYCLFGQYEEALRNLDKTIALNPNF 516
           YY +       G Y+EA+   D+ I LNP++
Sbjct: 284 YYNKAVALNHLGIYDEAILYYDQAIKLNPDY 314



 Score = 45.1 bits (105), Expect = 0.11,   Method: Compositional matrix adjust.
 Identities = 40/186 (21%), Positives = 82/186 (44%), Gaps = 12/186 (6%)

Query: 105 ATVYIFTSQSTKAIEDLTQLVEDTSVDPKIKVNAHIKRAVVHLHAA----SDFTKAFADL 160
           A  Y   + S  A+ +  + ++D   D  I+ N+H   A  +         ++ +A  D 
Sbjct: 145 ADAYYNRALSKNALGEYKEAIKD--YDKAIEYNSHFIDAYNNRGNVKEKLGNYNEAIDDY 202

Query: 161 DEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQRHFVVHKMIV 220
             A  ++   AD Y+ R         Y+ A+ + D+ I + PN+  A   R  +   M  
Sbjct: 203 TNAIHINREFADGYFNRANAKFHIKDYKGAVEDFDELIKIAPNYLKAYLNRGIIAMTM-- 260

Query: 221 PGDRERVEQSLKEFRNFVDTHSNVVEACTLFAQVLVDQEDFDGAEEYFNRSIRVDPENAS 280
               E  ++++K+F   ++   N+ +A    A  L     +D A  Y++++I+++P+ + 
Sbjct: 261 ----EAYQEAIKDFDKVIELDPNIADAYYNKAVALNHLGIYDEAILYYDQAIKLNPDYSE 316

Query: 281 LYVHRA 286
            Y +R 
Sbjct: 317 SYFNRG 322



 Score = 43.1 bits (100), Expect = 0.42,   Method: Compositional matrix adjust.
 Identities = 30/85 (35%), Positives = 42/85 (49%), Gaps = 11/85 (12%)

Query: 450 GNLENESGQKHAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKT 509
            N++NE+  K A  D+T A        K++   A +YY RG I    G  E AL++ DK 
Sbjct: 51  ANIDNENSYKSAVEDYTWAL-------KLNDKFAAAYYNRGIINRSLGNTENALKDFDKA 103

Query: 510 IALNPNFHVARAQRHFVWTSTLAEL 534
           I LN N   A    ++V  +T A L
Sbjct: 104 IELNYNLEEA----YYVRANTKASL 124



 Score = 38.9 bits (89), Expect = 7.8,   Method: Compositional matrix adjust.
 Identities = 32/116 (27%), Positives = 59/116 (50%), Gaps = 8/116 (6%)

Query: 65  LSKAKRAFEHEDYLTAIRHCTEEIESTSSNHTKALARLLRATVYIFTSQSTKAIEDLTQL 124
            ++A   F  +DY  A+    E I+  + N+ KA   L R  + +      +AI+D  ++
Sbjct: 217 FNRANAKFHIKDYKGAVEDFDELIK-IAPNYLKAY--LNRGIIAMTMEAYQEAIKDFDKV 273

Query: 125 VEDTSVDPKIKVNAHIKRAVVHLHAASDFTKAFADLDEAEKVDPNVADSYYQRGQI 180
           +E   +DP I  +A+  +AV   H    + +A    D+A K++P+ ++SY+ RG  
Sbjct: 274 IE---LDPNI-ADAYYNKAVALNHLGI-YDEAILYYDQAIKLNPDYSESYFNRGNF 324


>gi|145483311|ref|XP_001427678.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
 gi|124394760|emb|CAK60280.1| unnamed protein product [Paramecium tetraurelia]
          Length = 456

 Score = 70.5 bits (171), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 84/365 (23%), Positives = 163/365 (44%), Gaps = 28/365 (7%)

Query: 170 VADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQRHFVVHKMIVPGDRERVEQ 229
           +   Y  +G   C   +YEE++   DK I LNPN+      +   + ++       + E+
Sbjct: 95  IPQYYCNKGNALCNLKKYEESIIEYDKAIELNPNYDDYYNSKGLALQELY------KYEE 148

Query: 230 SLKEFRNFVDTHSNVVEACTLFAQVLVDQEDFDGAEEYFNRSIRVDPENASLYVHRAMLM 289
           S+ EF   +  + N  +      Q L + + ++ +   F+++I ++P     Y  +   +
Sbjct: 149 SIIEFDKAIKLNPNYDDYYNSKGQALQNLKKYEESIIEFDKAIELNPNYDDYYNSKGNAL 208

Query: 290 LQARGNVDEAIKLIEKAISIDKSCMFAYETLGTIEVQRGRLEEAVKCFNKALPLARDEAE 349
              +   +E+I   +KAI ++ +    Y + G       + EE++  ++KA+ L  ++ +
Sbjct: 209 CNQKK-YEESIIEYDKAIELNPNYAEYYNSKGYALYNLKKYEESIIEYDKAIELNPNDDD 267

Query: 350 LSHIYSLRDAAIAQMKVCER----YNIKKKVSPRSQNITKNEKLAIKQLRENNDIIIRPA 405
               Y+++  A+  +K  E     Y+   +++P   +   ++ LA+++  +  + II   
Sbjct: 268 Y---YNIKGNALCNLKKYEESIIEYDKAIELNPNYDDYYNSKGLALQEFYKYEESIIE-F 323

Query: 406 DKGGKTVVMDKADYTQKMTSILNSNDYE--IIPGDPTKTIEESEKYGNLENESGQKHAAS 463
           DK  +        Y  K  ++ N   YE  II  D  K IE +  Y +  N  G   A  
Sbjct: 324 DKAIELNQNYSQYYCNKGQALCNLKKYEESIIEYD--KAIELNPNYDDYYNSKGL--ALQ 379

Query: 464 DFTK---AFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVAR 520
           +F K   +  + D+A +++ N +  Y  +GQ      +YEE++   DK I LNPN     
Sbjct: 380 EFYKYEESIIEFDKAIELNQNYSQYYCNKGQALFNLKKYEESIIEFDKAIKLNPN----D 435

Query: 521 AQRHF 525
           A  HF
Sbjct: 436 ADSHF 440



 Score = 62.0 bits (149), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 49/207 (23%), Positives = 100/207 (48%), Gaps = 8/207 (3%)

Query: 147 LHAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHV 206
           L+    + ++  + D+A +++PN  D Y  +G   C   +YEE++   DK I LNPN+  
Sbjct: 242 LYNLKKYEESIIEYDKAIELNPNDDDYYNIKGNALCNLKKYEESIIEYDKAIELNPNYDD 301

Query: 207 ARAQRHFVVHKMIVPGDRERVEQSLKEFRNFVDTHSNVVEACTLFAQVLVDQEDFDGAEE 266
               +   + +        + E+S+ EF   ++ + N  +      Q L + + ++ +  
Sbjct: 302 YYNSKGLALQEFY------KYEESIIEFDKAIELNQNYSQYYCNKGQALCNLKKYEESII 355

Query: 267 YFNRSIRVDPENASLYVHRAMLMLQARGNVDEAIKLIEKAISIDKSCMFAYETLGTIEVQ 326
            ++++I ++P N   Y +   L LQ     +E+I   +KAI ++++    Y   G     
Sbjct: 356 EYDKAIELNP-NYDDYYNSKGLALQEFYKYEESIIEFDKAIELNQNYSQYYCNKGQALFN 414

Query: 327 RGRLEEAVKCFNKALPLARDEAELSHI 353
             + EE++  F+KA+ L  ++A+ SH 
Sbjct: 415 LKKYEESIIEFDKAIKLNPNDAD-SHF 440



 Score = 59.3 bits (142), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 71/349 (20%), Positives = 151/349 (43%), Gaps = 50/349 (14%)

Query: 147 LHAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHV 206
           L     + ++  + D+A K++PN  D Y  +GQ      +YEE++   DK I LNPN+  
Sbjct: 140 LQELYKYEESIIEFDKAIKLNPNYDDYYNSKGQALQNLKKYEESIIEFDKAIELNPNYD- 198

Query: 207 ARAQRHFVVHKMIVPGDRERVEQSLKEFRNFVDTHSNVVEACTLFAQVLVDQEDFDGAEE 266
                 +   K     ++++ E+S+ E+   ++ + N  E        L + + ++ +  
Sbjct: 199 -----DYYNSKGNALCNQKKYEESIIEYDKAIELNPNYAEYYNSKGYALYNLKKYEESII 253

Query: 267 YFNRSIRVDPENASLYVHRAMLMLQARGNVDEAIKLIEKAISIDKSCMFAYETLGTIEVQ 326
            ++++I ++P +   Y  +   +   +   +E+I   +KAI ++ +    Y + G    +
Sbjct: 254 EYDKAIELNPNDDDYYNIKGNALCNLKK-YEESIIEYDKAIELNPNYDDYYNSKGLALQE 312

Query: 327 RGRLEEAVKCFNKALPLARDEAELSHIYSLRDAAIAQMKVCE----RYNIKKKVSPRSQN 382
             + EE++  F+KA+ L ++    S  Y  +  A+  +K  E     Y+   +++P   +
Sbjct: 313 FYKYEESIIEFDKAIELNQN---YSQYYCNKGQALCNLKKYEESIIEYDKAIELNPNYDD 369

Query: 383 ITKNEKLAIKQLRENNDIIIRPADKGGKTVVMDKADYTQKMTSILNSNDYEIIPGDPTKT 442
              ++ LA+++  +  + II            DKA                         
Sbjct: 370 YYNSKGLALQEFYKYEESIIE----------FDKA------------------------- 394

Query: 443 IEESEKYGNLENESGQK-HAASDFTKAFADLDEAEKVDPNVADSYYQRG 490
           IE ++ Y       GQ       + ++  + D+A K++PN ADS++ +G
Sbjct: 395 IELNQNYSQYYCNKGQALFNLKKYEESIIEFDKAIKLNPNDADSHFNKG 443


>gi|225620520|ref|YP_002721777.1| TPR domain-containing protein [Brachyspira hyodysenteriae WA1]
 gi|225215339|gb|ACN84073.1| TPR domain-containing protein [Brachyspira hyodysenteriae WA1]
          Length = 392

 Score = 70.5 bits (171), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 50/199 (25%), Positives = 94/199 (47%), Gaps = 21/199 (10%)

Query: 152 DFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQR 211
           D+  +  D ++A +V P+ AD+YY R       G+Y+EA+++ DK I  N +F       
Sbjct: 126 DYKGSIEDYNKAIEVYPHFADAYYNRALSKNALGEYKEAIKDYDKAIEYNSHF------- 178

Query: 212 HFVVHKMIVPGDRERVEQSLKEFRNFVDTHSNVVEACTLFAQVLVDQ-------EDFDGA 264
                 +    +R  V++ L  F   +D ++N +     FA    ++       +D+ GA
Sbjct: 179 ------IDAYNNRGNVKEKLGNFNEAIDDYTNAIHINREFADGYFNRANAKFHIKDYKGA 232

Query: 265 EEYFNRSIRVDPENASLYVHRAMLMLQARGNVDEAIKLIEKAISIDKSCMFAYETLGTIE 324
            E F+  I+++P+    Y++R ++ +       EAIK  +K I ++ +   A+       
Sbjct: 233 VEDFDELIKINPKYTKAYLNRGIIAMTMEA-YQEAIKDFDKVIELEPNLADAHYNKAVAL 291

Query: 325 VQRGRLEEAVKCFNKALPL 343
              G  +EA+  +NKA+ L
Sbjct: 292 NHLGIYDEAILYYNKAIEL 310



 Score = 63.2 bits (152), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 67/243 (27%), Positives = 107/243 (44%), Gaps = 48/243 (19%)

Query: 110 FTSQSTK-AIEDLTQLVEDTSVDPKIKVNAHIKRA--VVHLHAASDFTKAFADLDEAEKV 166
           F S++ K AIE  +++++   +D  I   A+  RA    ++   + +  A  D     K+
Sbjct: 17  FKSKNYKLAIEYFSEVIK---LDSTI-YEAYYNRANAKANIDDEASYKSAVEDYTWTIKL 72

Query: 167 DPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQRHFVVHKMIVPGDRER 226
           +   A +YY RG I    G  EEAL++ DKTI LN N      + ++V         R  
Sbjct: 73  NDQFAAAYYNRGIINRSLGNTEEALKDFDKTIELNYNLE----EVYYV---------RAN 119

Query: 227 VEQSLKEFRNFVDTHSNVVEACTLFAQVLVDQEDFDGAEEYFNRSIRVDPENASLYVHRA 286
            + SLK                           D+ G+ E +N++I V P  A  Y +RA
Sbjct: 120 TKASLK---------------------------DYKGSIEDYNKAIEVYPHFADAYYNRA 152

Query: 287 MLMLQARGNVDEAIKLIEKAISIDKSCMFAYETLGTIEVQRGRLEEAVKCFNKALPLARD 346
            L   A G   EAIK  +KAI  +   + AY   G ++ + G   EA+  +  A+ + R+
Sbjct: 153 -LSKNALGEYKEAIKDYDKAIEYNSHFIDAYNNRGNVKEKLGNFNEAIDDYTNAIHINRE 211

Query: 347 EAE 349
            A+
Sbjct: 212 FAD 214



 Score = 61.6 bits (148), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 67/265 (25%), Positives = 114/265 (43%), Gaps = 25/265 (9%)

Query: 266 EYFNRSIRVDPENASLYVHRAMLMLQARGNVDE------AIKLIEKAISIDKSCMFAYET 319
           EYF+  I++D      Y +RA     A+ N+D+      A++     I ++     AY  
Sbjct: 27  EYFSEVIKLDSTIYEAYYNRA----NAKANIDDEASYKSAVEDYTWTIKLNDQFAAAYYN 82

Query: 320 LGTIEVQRGRLEEAVKCFNKALPLARDEAELSHIYSLRDAAIAQMK-VCERYNIKKKVSP 378
            G I    G  EEA+K F+K + L  +  E+ ++ +   A++   K   E YN   +V P
Sbjct: 83  RGIINRSLGNTEEALKDFDKTIELNYNLEEVYYVRANTKASLKDYKGSIEDYNKAIEVYP 142

Query: 379 RSQNITKNEKLAIKQLRENNDIIIRPADKGGK------TVVMDKADYTQKMTSILNSNDY 432
              +   N  L+   L E  + I +  DK  +          ++ +  +K+ +   + D 
Sbjct: 143 HFADAYYNRALSKNALGEYKEAI-KDYDKAIEYNSHFIDAYNNRGNVKEKLGNFNEAID- 200

Query: 433 EIIPGDPTKTIEESEKYGN-LENESGQKHAASDFTKAFADLDEAEKVDPNVADSYYQRGQ 491
                D T  I  + ++ +   N +  K    D+  A  D DE  K++P    +Y  RG 
Sbjct: 201 -----DYTNAIHINREFADGYFNRANAKFHIKDYKGAVEDFDELIKINPKYTKAYLNRGI 255

Query: 492 IYCLFGQYEEALRNLDKTIALNPNF 516
           I      Y+EA+++ DK I L PN 
Sbjct: 256 IAMTMEAYQEAIKDFDKVIELEPNL 280



 Score = 43.5 bits (101), Expect = 0.27,   Method: Compositional matrix adjust.
 Identities = 23/69 (33%), Positives = 33/69 (47%), Gaps = 1/69 (1%)

Query: 136 VNAHIKRAVVHLHAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLD 195
            + +  RA    H   D+  A  D DE  K++P    +Y  RG I      Y+EA+++ D
Sbjct: 213 ADGYFNRANAKFHI-KDYKGAVEDFDELIKINPKYTKAYLNRGIIAMTMEAYQEAIKDFD 271

Query: 196 KTIALNPNF 204
           K I L PN 
Sbjct: 272 KVIELEPNL 280


>gi|145495192|ref|XP_001433589.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
 gi|124400708|emb|CAK66192.1| unnamed protein product [Paramecium tetraurelia]
          Length = 652

 Score = 70.5 bits (171), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 73/373 (19%), Positives = 160/373 (42%), Gaps = 42/373 (11%)

Query: 145 VHLHAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNF 204
           + L   + + +A    DE   ++P    ++  +G       QYEEA++  ++ I++NP  
Sbjct: 103 ITLDDLNQYKEAIECYDEIISINPKYIGAWKGKGHTLINLNQYEEAIKCYNEAISINPKH 162

Query: 205 HVARAQRHFVVHKMIVPGDRERVEQSLKEFRNFVDTHSNVVEACTLFAQVLVDQEDFDGA 264
           + A   +   +  +       + E+++K +   +  + N  +        L +   ++ A
Sbjct: 163 NGAWYNKGIALQNL------NQYEEAIKCYNEAISINPNQEDVWNCKGNTLRNLNQYEEA 216

Query: 265 EEYFNRSIRVDPENASLYVHRAMLMLQARGNVDEAIKLIEKAISIDKSCMFAYETLGTIE 324
            + +N++I ++P+    + ++  + L      +EAI+  ++ ISI+   ++A+   G   
Sbjct: 217 IKCYNQAISINPKYFDAWYNKG-ITLDNLNYYEEAIECYDEIISINPKYIYAWNGKGNTL 275

Query: 325 VQRGRLEEAVKCFNKALPLARDEAELSHIYSLRDAAIAQMKVCERYNIKKKVSPRSQNIT 384
               + EEA+KC+N+A+ +  ++ ++                   +N K       +N+ 
Sbjct: 276 RNLNQYEEAIKCYNEAISINPNQEDV-------------------WNCKGNT---LRNLN 313

Query: 385 KNEKLAIKQLRENNDIIIRPADKG-GKTVVMDKADYTQKMTSILNSNDYEIIPGDPTKTI 443
           + E+ AIK   E   I  +  D    K + +D  +  ++     +    EII  +P    
Sbjct: 314 QYEE-AIKCYNEAISINHKYFDAWYNKGITLDDLNQYKEAIECYD----EIISINPKYIY 368

Query: 444 EESEKYGNLENESGQKHAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEAL 503
             + K   L N        + + +A    ++A  ++P   D++Y +G       QYEEA+
Sbjct: 369 AWNGKGNTLRN-------LNQYEEAIKCYNQAISINPKYFDAWYNKGATLDNLNQYEEAI 421

Query: 504 RNLDKTIALNPNF 516
              D+ I++N  F
Sbjct: 422 ECYDEIISINQKF 434



 Score = 59.7 bits (143), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 60/287 (20%), Positives = 125/287 (43%), Gaps = 24/287 (8%)

Query: 57  NESHELDLLSKAKRAFEHEDYLTAIRHCTEEIESTSSNHTKALARLLRATVYIFTSQSTK 116
           N+   LD L++ K A E          C +EI S +  +  A     +    I  +Q  +
Sbjct: 100 NKGITLDDLNQYKEAIE----------CYDEIISINPKYIGAWKG--KGHTLINLNQYEE 147

Query: 117 AIEDLTQLVEDTSVDPKIKVNAHIKRAVVHLHAASDFTKAFADLDEAEKVDPNVADSYYQ 176
           AI+   + +   S++PK   N       + L   + + +A    +EA  ++PN  D +  
Sbjct: 148 AIKCYNEAI---SINPK--HNGAWYNKGIALQNLNQYEEAIKCYNEAISINPNQEDVWNC 202

Query: 177 RGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQRHFVVHKMIVPGDRERVEQSLKEFRN 236
           +G       QYEEA++  ++ I++NP +  A        +K I   +    E++++ +  
Sbjct: 203 KGNTLRNLNQYEEAIKCYNQAISINPKYFDAW------YNKGITLDNLNYYEEAIECYDE 256

Query: 237 FVDTHSNVVEACTLFAQVLVDQEDFDGAEEYFNRSIRVDPENASLYVHRAMLMLQARGNV 296
            +  +   + A       L +   ++ A + +N +I ++P    ++  +    L+     
Sbjct: 257 IISINPKYIYAWNGKGNTLRNLNQYEEAIKCYNEAISINPNQEDVWNCKGN-TLRNLNQY 315

Query: 297 DEAIKLIEKAISIDKSCMFAYETLGTIEVQRGRLEEAVKCFNKALPL 343
           +EAIK   +AISI+     A+   G       + +EA++C+++ + +
Sbjct: 316 EEAIKCYNEAISINHKYFDAWYNKGITLDDLNQYKEAIECYDEIISI 362



 Score = 50.8 bits (120), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 51/261 (19%), Positives = 109/261 (41%), Gaps = 44/261 (16%)

Query: 116 KAIEDLTQLVEDTSVDPKIKVNAHIKRAVVHLHAASDFTKAFADLDEAEKVDPNVADSYY 175
           +AIE   +++   S++PK     + K     L   + + +A    +EA  ++PN  D + 
Sbjct: 249 EAIECYDEII---SINPKYIYAWNGKGNT--LRNLNQYEEAIKCYNEAISINPNQEDVWN 303

Query: 176 QRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQRHFVVHKMIVPGDRERVEQSLKEFR 235
            +G       QYEEA++  ++ I++N  +  A        +K I   D  + +++++ + 
Sbjct: 304 CKGNTLRNLNQYEEAIKCYNEAISINHKYFDAW------YNKGITLDDLNQYKEAIECYD 357

Query: 236 NFVDTHSNVVEACTLFAQVLVDQEDFDGAEEYFNRSIRVDPENASLYVHRAMLM------ 289
             +  +   + A       L +   ++ A + +N++I ++P+    + ++   +      
Sbjct: 358 EIISINPKYIYAWNGKGNTLRNLNQYEEAIKCYNQAISINPKYFDAWYNKGATLDNLNQY 417

Query: 290 --------------------LQARGNV-------DEAIKLIEKAISIDKSCMFAYETLGT 322
                                  +GN        +EAIK   +AISI+     A+   G 
Sbjct: 418 EEAIECYDEIISINQKFIHAWNGKGNTLRKLNQYEEAIKCYNEAISINHKYFDAWNNKGI 477

Query: 323 IEVQRGRLEEAVKCFNKALPL 343
                 + EEA+KC+N+A+ +
Sbjct: 478 SLQNLNQYEEAIKCYNEAISI 498



 Score = 49.7 bits (117), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 66/343 (19%), Positives = 149/343 (43%), Gaps = 29/343 (8%)

Query: 186 QYEEALRNLDKTIALNPNFHVA--RAQRHFVVHKMIVPGDRERVEQSLKEFRNFVDTHSN 243
           QY+ A+   D+ +++NP +  A         ++  I   +  + E+++K +   V  +  
Sbjct: 1   QYQVAIECYDEALSINPQYFKALNNKGNLKNLNLGISLENLNQYEEAIKCYNEAVSMNPK 60

Query: 244 VVEACTLFAQVLVDQEDFDGAEEYFNRSIRVDPENASLYVHRAMLMLQARGNVDEAIKLI 303
             +A       L +   ++ A + +N +I ++ +    + ++  + L       EAI+  
Sbjct: 61  YFQAWNNKGN-LRNLNQYEEAIKCYNEAISINHKYFDAWYNKG-ITLDDLNQYKEAIECY 118

Query: 304 EKAISIDKSCMFAYETLGTIEVQRGRLEEAVKCFNKALPL--ARDEAELSHIYSLRDAAI 361
           ++ ISI+   + A++  G   +   + EEA+KC+N+A+ +    + A  +   +L++   
Sbjct: 119 DEIISINPKYIGAWKGKGHTLINLNQYEEAIKCYNEAISINPKHNGAWYNKGIALQNLNQ 178

Query: 362 AQMKVCERYNIKKKVSPRSQNITKNEKLAIKQLRE--------NNDIIIRPA---DKGGK 410
            +  + + YN    ++P  +++   +   ++ L +        N  I I P        K
Sbjct: 179 YEEAI-KCYNEAISINPNQEDVWNCKGNTLRNLNQYEEAIKCYNQAISINPKYFDAWYNK 237

Query: 411 TVVMDKADYTQKMTSILNSNDYEIIPGDPTKTIEESEKYGNLENESGQKHAASDFTKAFA 470
            + +D  +Y ++     +    EII  +P      + K   L N        + + +A  
Sbjct: 238 GITLDNLNYYEEAIECYD----EIISINPKYIYAWNGKGNTLRN-------LNQYEEAIK 286

Query: 471 DLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALN 513
             +EA  ++PN  D +  +G       QYEEA++  ++ I++N
Sbjct: 287 CYNEAISINPNQEDVWNCKGNTLRNLNQYEEAIKCYNEAISIN 329



 Score = 40.4 bits (93), Expect = 2.1,   Method: Compositional matrix adjust.
 Identities = 40/192 (20%), Positives = 83/192 (43%), Gaps = 11/192 (5%)

Query: 89  ESTSSNHTKALARLLRATVYIFTSQSTKAIEDLTQLVEDTSVDPKIKVNAHIKRAVVHLH 148
           E+ S NH    A   +       +Q  +AIE   +++   S++PK     + K     L 
Sbjct: 324 EAISINHKYFDAWYNKGITLDDLNQYKEAIECYDEII---SINPKYIYAWNGKGNT--LR 378

Query: 149 AASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVAR 208
             + + +A    ++A  ++P   D++Y +G       QYEEA+   D+ I++N  F  A 
Sbjct: 379 NLNQYEEAIKCYNQAISINPKYFDAWYNKGATLDNLNQYEEAIECYDEIISINQKFIHAW 438

Query: 209 AQRHFVVHKMIVPGDRERVEQSLKEFRNFVDTHSNVVEACTLFAQVLVDQEDFDGAEEYF 268
             +   + K+       + E+++K +   +  +    +A       L +   ++ A + +
Sbjct: 439 NGKGNTLRKL------NQYEEAIKCYNEAISINHKYFDAWNNKGISLQNLNQYEEAIKCY 492

Query: 269 NRSIRVDPENAS 280
           N +I + P+  S
Sbjct: 493 NEAISIKPQMCS 504


>gi|150401356|ref|YP_001325122.1| hypothetical protein Maeo_0930 [Methanococcus aeolicus Nankai-3]
 gi|150014059|gb|ABR56510.1| TPR repeat-containing protein [Methanococcus aeolicus Nankai-3]
          Length = 329

 Score = 70.5 bits (171), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 75/354 (21%), Positives = 149/354 (42%), Gaps = 46/354 (12%)

Query: 145 VHLHAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNF 204
           + L+    +  A   +D A  ++P  ++++  +G  +  + +Y  A+   DK + LNP  
Sbjct: 10  ITLYGQRRYMDAIGAIDTAISINPKNSNAWKHKGIAFRKWKKYPNAIECFDKALNLNPKN 69

Query: 205 HVARAQRHFVVHKMIVPGDRERVEQSLKEFRNFVDTHSNVVEACTLFAQVLVDQEDFDGA 264
             A       +HK ++ G   + E+++      ++   N          +L   E ++ A
Sbjct: 70  SSA------WMHKGVLYGKINKYEEAITCLDKSLELTPNNARVWIYKGVILRKWEKYEEA 123

Query: 265 EEYFNRSIRVDPENASLYVHRAMLMLQARGNVDEAIKLIEKAISIDKSCMFAYETLGTIE 324
             YFN+++ ++P++A ++ H  +L  +     +EA+    KA  ++      ++  G + 
Sbjct: 124 ITYFNKALEINPKDARVWKHAGVLFSKLE-KYEEALLCFNKATEVNPRVKQIFDEKGVVL 182

Query: 325 VQRGRLEEAVKCFNKALPLARDEAELSHIYSLRDAAIAQMKVCERYNIKKKVSPRSQNIT 384
              GR EEA++C+N  + L R+    S I +L+   + +MK   RY           NI 
Sbjct: 183 ENLGRYEEALECYN--ILLNRNPKN-SGILNLKIRVLRKMK---RYEDALNCCDEVLNIN 236

Query: 385 KNEKLAIKQLRENNDIIIRPADKGGKTVVMDKADYTQKMTSILNSNDYE--IIPGDPTKT 442
                              P +K           Y  K+  + N   YE  +   D    
Sbjct: 237 -------------------PENKN---------TYFIKLQILRNLERYEDALNCCDEVLN 268

Query: 443 IEESEKYGNLENESGQK-HAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCL 495
           I  S K GN+ N  G   +   ++ KA    ++A +++P+  D Y ++G+I+ +
Sbjct: 269 IISSSKKGNIWNIKGDIFNDLGEYNKAIGCFNKALEINPH--DDYAKQGKIFAI 320



 Score = 47.8 bits (112), Expect = 0.016,   Method: Compositional matrix adjust.
 Identities = 53/252 (21%), Positives = 115/252 (45%), Gaps = 14/252 (5%)

Query: 94  NHTKALARLLRATVYIFTSQSTKAIEDLTQLVEDTSVDPKIKVNAHIKRAVVHLHAASDF 153
           N   + A + +  +Y   ++  +AI  L + +E T  + ++     I + V+ L     +
Sbjct: 66  NPKNSSAWMHKGVLYGKINKYEEAITCLDKSLELTPNNARV----WIYKGVI-LRKWEKY 120

Query: 154 TKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQRHF 213
            +A    ++A +++P  A  +   G ++    +YEEAL   +K   +NP     R ++ F
Sbjct: 121 EEAITYFNKALEINPKDARVWKHAGVLFSKLEKYEEALLCFNKATEVNP-----RVKQIF 175

Query: 214 VVHKMIVPGDRERVEQSLKEFRNFVDTHSNVVEACTLFAQVLVDQEDFDGAEEYFNRSIR 273
              K +V  +  R E++L+ +   ++ +        L  +VL   + ++ A    +  + 
Sbjct: 176 D-EKGVVLENLGRYEEALECYNILLNRNPKNSGILNLKIRVLRKMKRYEDALNCCDEVLN 234

Query: 274 VDPENASLYVHRAMLMLQARGNVDEAIKLIEKAISIDKSCMFA--YETLGTIEVQRGRLE 331
           ++PEN + Y  + + +L+     ++A+   ++ ++I  S      +   G I    G   
Sbjct: 235 INPENKNTYFIK-LQILRNLERYEDALNCCDEVLNIISSSKKGNIWNIKGDIFNDLGEYN 293

Query: 332 EAVKCFNKALPL 343
           +A+ CFNKAL +
Sbjct: 294 KAIGCFNKALEI 305



 Score = 40.0 bits (92), Expect = 3.1,   Method: Compositional matrix adjust.
 Identities = 22/71 (30%), Positives = 36/71 (50%), Gaps = 6/71 (8%)

Query: 451 NLENESGQKHAASDFTK------AFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALR 504
           N +N +  KH    F K      A    D+A  ++P  + ++  +G +Y    +YEEA+ 
Sbjct: 32  NPKNSNAWKHKGIAFRKWKKYPNAIECFDKALNLNPKNSSAWMHKGVLYGKINKYEEAIT 91

Query: 505 NLDKTIALNPN 515
            LDK++ L PN
Sbjct: 92  CLDKSLELTPN 102


>gi|119357636|ref|YP_912280.1| hypothetical protein Cpha266_1840 [Chlorobium phaeobacteroides DSM
           266]
 gi|119354985|gb|ABL65856.1| TPR repeat-containing protein [Chlorobium phaeobacteroides DSM 266]
          Length = 3560

 Score = 70.5 bits (171), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 79/300 (26%), Positives = 131/300 (43%), Gaps = 25/300 (8%)

Query: 54  GDTNESHELDLLSKAKRA--FEHEDYLTAIRHCTEEIESTSSNHTKALARLLRATVYIFT 111
           G TNE        K +RA  F  E  L        EI S+S  H  AL   L AT+    
Sbjct: 10  GSTNEES-----VKLQRALKFHQEGRLDEAEALYREILSSSPEHFDALQ--LSATIAAQR 62

Query: 112 SQSTKAIEDLTQLVEDTSVDPKIKVNAHIKRAVVHLHAASDFTKAFADLDEAEKVDPNVA 171
            +  KA+    Q++    V P       +      L A   + +A    ++A  + P+ A
Sbjct: 63  HEFEKAVTLFDQVIHINPVHP-----GSLNNRGNALKALQRYEEALESYEKAIAIKPDYA 117

Query: 172 DSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQRHFVVHKMIVPGDRERVEQSL 231
           D+Y  R  +     +YEEAL + +K IA+NP+F  A   R  + +      D +R E++L
Sbjct: 118 DAYSNRSVVLKELMRYEEALASYEKAIAINPDFAEAYYNRAVIFY------DSDRYEEAL 171

Query: 232 KEFRNFVDTHSNVVEACTLFAQVLVDQEDFDGAEEYFNRSI--RVDPENASLYVHRAMLM 289
             +   +    + VEA      V +  + ++ A   + ++I  +++ + A   +  A+L 
Sbjct: 172 ASYDRAIVLKPDYVEAYANRGNVYLKLKRYEDALGSYKKAIALKLECDEAYYNMGNALLE 231

Query: 290 LQARGNVDEAIKLIEKAISIDKSCMFAYETLGTIEVQRGRLEEAVKCFNKALPLARDEAE 349
           LQ     +EA+   EKAI++      AY   G + +   R E+A+  + KA+ L    AE
Sbjct: 232 LQ---RYEEALASYEKAIALKVDYFEAYSNRGVVLLVLRRYEDALVSYEKAIALKPHHAE 288



 Score = 62.8 bits (151), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 73/303 (24%), Positives = 128/303 (42%), Gaps = 20/303 (6%)

Query: 87   EIESTSSNHTKALARLLRATVYIFTSQSTKAIEDLTQLVEDTSVDPKIKVNAHIKRAVVH 146
            EI S S  H  AL   L AT+      S KA+     ++ D ++  K      +    + 
Sbjct: 1501 EILSFSPEHFDALQ--LSATIAAQRHDSEKAL-----VLFDQALAIKPDHARSLNNRGIA 1553

Query: 147  LHAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHV 206
            L     + +A    + A  V P+  + Y  RG       +YEEAL   D  IAL P    
Sbjct: 1554 LQELKRYDEALESYERAIAVKPDFIEPYSNRGNTLQELKRYEEALACYDSAIALKPE--- 1610

Query: 207  ARAQRHFVVHKMIVPGDRERVEQSLKEFRNFVDTHSNVVEACTLFAQVLVDQEDFDGAEE 266
                  F  H+ +V  + +R E++L  + + +    +  EA +    +L   + ++ A  
Sbjct: 1611 ---NEQFYYHRAVVLHNMKRYEEALLNYDHVLALKPDCAEAYSNRGNILTGLKRYEEALA 1667

Query: 267  YFNRSIRVDPENASL-YVHRAMLMLQARGNVDEAIKLIEKAISIDKSCMFAYETLGTIEV 325
             +++ I + P+N  + Y +R +++L+  G   +A    E  I  +     AY   G    
Sbjct: 1668 SYDQVIALKPDNNLVAYSNRGVVLLEL-GRYRDAFLSFENTIEQNSDSADAYCHRGLALR 1726

Query: 326  QRGRLEEAVKCFNKALPLARDEAELSHIYSLRDAAIAQMKVCERYNIKKKVSPRSQNITK 385
            +  R EEA+  + KAL L  D   LS +         +M++C+     ++V    + I +
Sbjct: 1727 KLKRYEEAIGSYEKALTLKPDYDFLSGL-----CLYTRMRICDWNAFDEQVRQIKKKIER 1781

Query: 386  NEK 388
            +EK
Sbjct: 1782 HEK 1784



 Score = 52.4 bits (124), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 64/261 (24%), Positives = 109/261 (41%), Gaps = 54/261 (20%)

Query: 155  KAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQRHFV 214
            KA A  D+A  + P+ A S   RG        YEEAL + +K IA+NP + +A + R   
Sbjct: 849  KAVALFDQALAIKPDHARSLNNRGIALQELKCYEEALGSYEKAIAINPEYAMAYSNRG-- 906

Query: 215  VHKMIVPGDRERVEQSLKEFRNFVDTHSNVVEACTLFAQVLVDQEDFDGAEEYFNRSIRV 274
                           +L+E + + D                        A E ++R+I +
Sbjct: 907  --------------NTLQELKRYED------------------------AVESYDRAIAL 928

Query: 275  DPENASLYVHRAMLMLQARGNVDEAIKLIEKAISIDKSCMFAYETLGTIEVQRGRLEEAV 334
            +P +A+ Y +R + +L+     ++A++  ++AI +      AY     +     R EEA+
Sbjct: 929  NPYSATAYSNRGVALLKLV-RYEDALESHDRAIVLKPDYADAYYNRSVVLEILMRYEEAI 987

Query: 335  KCFNKALPLARDEAELSHIYSLRDAAIAQMKVCERYNIKKKVSPRSQNITKNEK------ 388
              + KAL L  D      +Y        +MK+C+      +V    + I ++EK      
Sbjct: 988  ASYEKALLLKPDGCFWYGMY-----LHTKMKICDWSVFDHQVHQLEKKIVRHEKGVSPFP 1042

Query: 389  -LAIK-QLRENNDIIIRPADK 407
             LAIK  L +  D+    A+K
Sbjct: 1043 FLAIKDSLSQQQDVACVFAEK 1063



 Score = 47.8 bits (112), Expect = 0.017,   Method: Compositional matrix adjust.
 Identities = 57/237 (24%), Positives = 90/237 (37%), Gaps = 46/237 (19%)

Query: 152  DFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQR 211
            D  KA A  D+A  + P+ A S   RG       +YEEAL + ++ I L P++       
Sbjct: 2952 DSEKALALFDQALAIKPDHARSLNNRGIALQELKRYEEALASYERAIVLKPDY------- 3004

Query: 212  HFVVHKMIVPGDRERVEQSLKEFRNFVDTHSNVVEACTLFAQVLVDQEDFDGAEEYFNRS 271
                                       D +SN           L+    +  A E + R+
Sbjct: 3005 --------------------------ADAYSNR-------GNTLMKMNQYKEALESYERA 3031

Query: 272  IRVDPENASLYVHRAMLMLQARGNVDEAIKLIEKAISIDKSCMFAYETLGTIEVQRGRLE 331
            I + PENA    H+    LQ     +E++   EKAI++       Y   G +  +  R E
Sbjct: 3032 IALKPENADACFHQGN-ALQELKRYNESLASYEKAIALKSVNAEVYAHRGVVLQKLSRFE 3090

Query: 332  EAVKCFNKALPLARDEAELSHIYSLRDAAIAQMKVCERYNIKKKVSPRSQNITKNEK 388
            +AV  + +AL L  D   L  +        A M +C+      +V    + I ++EK
Sbjct: 3091 DAVLNYKQALLLKPDYDFLPGL-----CLHAIMHLCDWREFDDQVHQLEKKIERHEK 3142



 Score = 47.0 bits (110), Expect = 0.025,   Method: Compositional matrix adjust.
 Identities = 68/264 (25%), Positives = 109/264 (41%), Gaps = 39/264 (14%)

Query: 280  SLYVHRAMLMLQARGNVDEAIKLIEKAISIDKSCMFAYETLGTIEVQRGRLEEAVKCFNK 339
            S+ + RA L L   G +DEA  L  + +S       A +   TI  QR   E+A+  F++
Sbjct: 1477 SVKLQRA-LKLHQEGRLDEAEALYREILSFSPEHFDALQLSATIAAQRHDSEKALVLFDQ 1535

Query: 340  ALPLARDEAELSHIYSLRDAAIAQMKVCERYNIKKKVSPRSQNITKNEKLAIKQLRENND 399
            AL +  D     H  SL +  IA ++  +RY+   +   R+  +  +             
Sbjct: 1536 ALAIKPD-----HARSLNNRGIA-LQELKRYDEALESYERAIAVKPD------------- 1576

Query: 400  IIIRPADKGGKTVVMDKADYTQKMTSILNSNDYEIIPGDPTKTIEESEKYGNLENESGQK 459
              I P    G T+        ++    L   D  I          E+E++    + +   
Sbjct: 1577 -FIEPYSNRGNTL-----QELKRYEEALACYDSAI------ALKPENEQF--YYHRAVVL 1622

Query: 460  HAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNP-NFHV 518
            H    + +A  + D    + P+ A++Y  RG I     +YEEAL + D+ IAL P N  V
Sbjct: 1623 HNMKRYEEALLNYDHVLALKPDCAEAYSNRGNILTGLKRYEEALASYDQVIALKPDNNLV 1682

Query: 519  ARAQRHFVWTSTLAELMAFSDEFM 542
            A + R  V    L EL  + D F+
Sbjct: 1683 AYSNRGVV----LLELGRYRDAFL 1702



 Score = 44.7 bits (104), Expect = 0.14,   Method: Compositional matrix adjust.
 Identities = 51/240 (21%), Positives = 104/240 (43%), Gaps = 17/240 (7%)

Query: 86   EEIESTSSNHTKALARLLRATVYIFTSQSTKAIEDLTQLVEDTSVDPKIKVNAHIKRAVV 145
            +EI S    H +AL  L  A++     + T A+    + +E   +DP   V+       +
Sbjct: 2248 QEILSIQPLHIEALQFL--ASMATRRKKYTDAVSLFERALE---IDPDHPVSWCT--LGI 2300

Query: 146  HLHAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFH 205
             LH    + +A A  ++A  + P   + Y  RG  + +  +Y+EAL + +K +A+NP + 
Sbjct: 2301 ALHELGRYEEALASYEKAIVLYPGFVEVYSNRGNTFLILKRYQEALSSYEKALAINPEYT 2360

Query: 206  VARAQRHFVVHKMIVPGDRERVEQSLKEFRNFVDTHSNVVEACTLFAQVLVDQEDFDGAE 265
             A   R   + ++      +R E++L ++        + + A    A VL + + +  A 
Sbjct: 2361 RAYFNRGSALLEL------KRYEEALADYDKVTALKPDYIVAYINCAVVLQELKRYREAI 2414

Query: 266  EYFNRSIRVDPEN---ASLYVHRAMLMLQARGNVDEAIKLIEKAISIDKSCMFAYETLGT 322
              + +++ + PE      LY++  M +       D+ +  I++ I   K  +  +  L  
Sbjct: 2415 GSYEKALALKPEYNFLRGLYLYTRMRICDWSAFEDQ-VNQIKRKIECQKKVIVPFSLLAV 2473



 Score = 43.9 bits (102), Expect = 0.20,   Method: Compositional matrix adjust.
 Identities = 24/78 (30%), Positives = 40/78 (51%)

Query: 450 GNLENESGQKHAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKT 509
           G+L N      A   + +A    ++A  + P+ AD+Y  R  +     +YEEAL + +K 
Sbjct: 84  GSLNNRGNALKALQRYEEALESYEKAIAIKPDYADAYSNRSVVLKELMRYEEALASYEKA 143

Query: 510 IALNPNFHVARAQRHFVW 527
           IA+NP+F  A   R  ++
Sbjct: 144 IAINPDFAEAYYNRAVIF 161



 Score = 43.9 bits (102), Expect = 0.20,   Method: Compositional matrix adjust.
 Identities = 67/306 (21%), Positives = 124/306 (40%), Gaps = 44/306 (14%)

Query: 226 RVEQSLKEFRNFVDTHSNVVEACTLFAQVLVDQEDFDGAEEYFNRSIRVDPENASLYVHR 285
           R++++   +R  + +     +A  L A +   + +F+ A   F++ I ++P +     +R
Sbjct: 30  RLDEAEALYREILSSSPEHFDALQLSATIAAQRHEFEKAVTLFDQVIHINPVHPGSLNNR 89

Query: 286 AMLMLQARGNVDEAIKLIEKAISIDKSCMFAYETLGTIEVQRGRLEEAVKCFNKALPLAR 345
               L+A    +EA++  EKAI+I      AY     +  +  R EEA+  + KA+ +  
Sbjct: 90  GN-ALKALQRYEEALESYEKAIAIKPDYADAYSNRSVVLKELMRYEEALASYEKAIAINP 148

Query: 346 DEAELSHIYSLRDAAIAQMKVCERYNIKKKVSPRSQNITKNEKLAIKQLRENNDIIIRPA 405
           D AE                    YN       R+     +++        +  I+++P 
Sbjct: 149 DFAE------------------AYYN-------RAVIFYDSDRYEEALASYDRAIVLKP- 182

Query: 406 DKGGKTVVMDKAD-YTQKMTSILNSNDYEIIPGDPTKTI----EESEKYGNLENESGQKH 460
                    D  + Y  +    L    YE   G   K I    E  E Y N+ N   +  
Sbjct: 183 ---------DYVEAYANRGNVYLKLKRYEDALGSYKKAIALKLECDEAYYNMGNALLELQ 233

Query: 461 AASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVAR 520
               + +A A  ++A  +  +  ++Y  RG +  +  +YE+AL + +K IAL P+   A 
Sbjct: 234 ---RYEEALASYEKAIALKVDYFEAYSNRGVVLLVLRRYEDALVSYEKAIALKPHHAEAY 290

Query: 521 AQRHFV 526
           A +  V
Sbjct: 291 ANQCLV 296



 Score = 43.9 bits (102), Expect = 0.23,   Method: Compositional matrix adjust.
 Identities = 22/63 (34%), Positives = 38/63 (60%)

Query: 465 FTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQRH 524
           + +A A  ++A  ++P+ A++YY R  I+    +YEEAL + D+ I L P++  A A R 
Sbjct: 133 YEEALASYEKAIAINPDFAEAYYNRAVIFYDSDRYEEALASYDRAIVLKPDYVEAYANRG 192

Query: 525 FVW 527
            V+
Sbjct: 193 NVY 195



 Score = 43.5 bits (101), Expect = 0.26,   Method: Compositional matrix adjust.
 Identities = 50/247 (20%), Positives = 96/247 (38%), Gaps = 53/247 (21%)

Query: 153  FTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQRH 212
            +T A +  + A ++DP+   S+   G      G+YEEAL + +K I L P F        
Sbjct: 2274 YTDAVSLFERALEIDPDHPVSWCTLGIALHELGRYEEALASYEKAIVLYPGF-------- 2325

Query: 213  FVVHKMIVPGDRERVEQSLKEFRNFVDTHSNVVEACTLFAQVLVDQEDFDGAEEYFNRSI 272
                                     V+ +SN            +  + +  A   + +++
Sbjct: 2326 -------------------------VEVYSNR-------GNTFLILKRYQEALSSYEKAL 2353

Query: 273  RVDPENASLYVHRAMLMLQARGNVDEAIKLIEKAISIDKSCMFAYETLGTIEVQRGRLEE 332
             ++PE    Y +R   +L+ +   +EA+   +K  ++    + AY     +  +  R  E
Sbjct: 2354 AINPEYTRAYFNRGSALLELK-RYEEALADYDKVTALKPDYIVAYINCAVVLQELKRYRE 2412

Query: 333  AVKCFNKALPLARDEAELSHIYSLRDAAIAQMKVCERY-------NIKKKVSPRSQNITK 385
            A+  + KAL L  +   L  +Y        +M++C+          IK+K+  + + I  
Sbjct: 2413 AIGSYEKALALKPEYNFLRGLY-----LYTRMRICDWSAFEDQVNQIKRKIECQKKVIVP 2467

Query: 386  NEKLAIK 392
               LA+K
Sbjct: 2468 FSLLAVK 2474



 Score = 40.8 bits (94), Expect = 2.0,   Method: Compositional matrix adjust.
 Identities = 56/239 (23%), Positives = 94/239 (39%), Gaps = 27/239 (11%)

Query: 87   EIESTSSNHTKALARLLRATVYIFTSQSTKAIEDLTQLVEDTSVDPKIKVNAHIKRAVVH 146
            EI S+S  H  AL   L AT+      S KA+      + D ++  K      +    + 
Sbjct: 2928 EILSSSPEHFDALR--LSATIAAQRHDSEKALA-----LFDQALAIKPDHARSLNNRGIA 2980

Query: 147  LHAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPN--- 203
            L     + +A A  + A  + P+ AD+Y  RG       QY+EAL + ++ IAL P    
Sbjct: 2981 LQELKRYEEALASYERAIVLKPDYADAYSNRGNTLMKMNQYKEALESYERAIALKPENAD 3040

Query: 204  --FHVARAQRHFVVHKMIVPGDRERVEQSLKEFRNFVDTHSNVVEACTLFAQVLVDQEDF 261
              FH   A +             +R  +SL  +   +   S   E       VL     F
Sbjct: 3041 ACFHQGNALQEL-----------KRYNESLASYEKAIALKSVNAEVYAHRGVVLQKLSRF 3089

Query: 262  DGAEEYFNRSIRVDPEN---ASLYVHRAMLMLQARGNVDEAIKLIEKAISIDKSCMFAY 317
            + A   + +++ + P+      L +H  M +   R   D+ +  +EK I   +  +F +
Sbjct: 3090 EDAVLNYKQALLLKPDYDFLPGLCLHAIMHLCDWR-EFDDQVHQLEKKIERHEKAIFPF 3147



 Score = 39.7 bits (91), Expect = 3.8,   Method: Compositional matrix adjust.
 Identities = 40/165 (24%), Positives = 71/165 (43%), Gaps = 41/165 (24%)

Query: 153  FTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQRH 212
            + +A    ++A  ++P  A +Y  RG       +YE+A+ + D+ IALNP    A + R 
Sbjct: 881  YEEALGSYEKAIAINPEYAMAYSNRGNTLQELKRYEDAVESYDRAIALNPYSATAYSNRG 940

Query: 213  FVVHKMIVPGDRERVEQSLKEFRNFVDTHSNVVEACTLFAQVLVDQEDFDGAEEYFNRSI 272
              + K++      R E +L       ++H   +          V + D+  A+ Y+NRS+
Sbjct: 941  VALLKLV------RYEDAL-------ESHDRAI----------VLKPDY--ADAYYNRSV 975

Query: 273  RVDPENASLYVHRAMLMLQARGNVDEAIKLIEKAISIDKSCMFAY 317
             ++           +LM       +EAI   EKA+ +     F Y
Sbjct: 976  VLE-----------ILM-----RYEEAIASYEKALLLKPDGCFWY 1004



 Score = 39.7 bits (91), Expect = 4.4,   Method: Compositional matrix adjust.
 Identities = 18/55 (32%), Positives = 31/55 (56%)

Query: 465  FTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVA 519
            + +A +  ++A  ++P    +Y+ RG       +YEEAL + DK  AL P++ VA
Sbjct: 2342 YQEALSSYEKALAINPEYTRAYFNRGSALLELKRYEEALADYDKVTALKPDYIVA 2396



 Score = 39.3 bits (90), Expect = 5.2,   Method: Compositional matrix adjust.
 Identities = 27/73 (36%), Positives = 38/73 (52%), Gaps = 4/73 (5%)

Query: 467 KAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQRHFV 526
           KA A  D+A  + P+ A S   RG        YEEAL + +K IA+NP + +A + R   
Sbjct: 849 KAVALFDQALAIKPDHARSLNNRGIALQELKCYEEALGSYEKAIAINPEYAMAYSNR--- 905

Query: 527 WTSTLAELMAFSD 539
             +TL EL  + D
Sbjct: 906 -GNTLQELKRYED 917



 Score = 38.9 bits (89), Expect = 6.3,   Method: Compositional matrix adjust.
 Identities = 22/75 (29%), Positives = 38/75 (50%), Gaps = 4/75 (5%)

Query: 460  HAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVA 519
            H    + +A A  ++A  + P   + Y  RG  + +  +Y+EAL + +K +A+NP +  A
Sbjct: 2303 HELGRYEEALASYEKAIVLYPGFVEVYSNRGNTFLILKRYQEALSSYEKALAINPEYTRA 2362

Query: 520  RAQRHFVWTSTLAEL 534
                +F   S L EL
Sbjct: 2363 ----YFNRGSALLEL 2373



 Score = 38.9 bits (89), Expect = 7.8,   Method: Compositional matrix adjust.
 Identities = 29/121 (23%), Positives = 55/121 (45%), Gaps = 4/121 (3%)

Query: 245  VEACTLFAQVLVDQEDFDGAEEYFNRSIRVDPENASLYVHRAMLMLQARGNVDEAIKLIE 304
            +EA    A +   ++ +  A   F R++ +DP++   +     + L   G  +EA+   E
Sbjct: 2258 IEALQFLASMATRRKKYTDAVSLFERALEIDPDHPVSWCTLG-IALHELGRYEEALASYE 2316

Query: 305  KAISIDKSCMFAYETLGTIEVQRGRLEEAVKCFNKALPLARDEAELSHIYSLRDAAIAQM 364
            KAI +    +  Y   G   +   R +EA+  + KAL +     E +  Y  R +A+ ++
Sbjct: 2317 KAIVLYPGFVEVYSNRGNTFLILKRYQEALSSYEKALAI---NPEYTRAYFNRGSALLEL 2373

Query: 365  K 365
            K
Sbjct: 2374 K 2374


>gi|296126379|ref|YP_003633631.1| hypothetical protein [Brachyspira murdochii DSM 12563]
 gi|296018195|gb|ADG71432.1| TPR repeat-containing protein [Brachyspira murdochii DSM 12563]
          Length = 391

 Score = 70.5 bits (171), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 56/198 (28%), Positives = 90/198 (45%), Gaps = 10/198 (5%)

Query: 152 DFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQ---YEEALRNLDKTIALNPNFHVAR 208
           D+  A     EA K+DPN A++YY RG           Y+ A+ +    I LN  F  A 
Sbjct: 21  DYKTAIDYFSEAIKLDPNSAETYYNRGNAKANLDDKKLYKSAIEDYSWAINLNDKFAAAY 80

Query: 209 AQRHFVVHKMIVPGDRERVEQSLKEFRNFVDTHSNVVEACTLFAQVLVDQEDFDGAEEYF 268
             R  +        ++E +E    +F   ++ + N+ EA  +        +D+ G+ E +
Sbjct: 81  YNRGILNRSF--GNNKEAIE----DFDKAIELNYNLEEAYYVRGNTKASLKDYKGSIEDY 134

Query: 269 NRSIRVDPENASLYVHRAMLMLQARGNVDEAIKLIEKAISIDKSCMFAYETLGTIEVQRG 328
           N+++ V P  +  Y + A L   A GN  EAIK  +KAI  +     AY   G ++ + G
Sbjct: 135 NKAVEVYPHFSDAYYNMA-LSHNAIGNYKEAIKAYDKAIEYNSHFADAYNNRGNVKEKLG 193

Query: 329 RLEEAVKCFNKALPLARD 346
              EA+  +  AL L R+
Sbjct: 194 YYNEAIDDYTNALHLNRN 211



 Score = 67.0 bits (162), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 90/356 (25%), Positives = 151/356 (42%), Gaps = 59/356 (16%)

Query: 64  LLSKAKRAFEHEDYLTAIRHCTEEIE------STSSNHTKALARLLRATVYIFTSQSTKA 117
            L  A  AF  +DY TAI + +E I+       T  N   A A L    +Y        A
Sbjct: 9   FLKNAYNAFNDKDYKTAIDYFSEAIKLDPNSAETYYNRGNAKANLDDKKLY------KSA 62

Query: 118 IEDLT---------------------------QLVEDTSVDPKIKVNAHIKRA--VVHLH 148
           IED +                           + +ED   D  I++N +++ A  V    
Sbjct: 63  IEDYSWAINLNDKFAAAYYNRGILNRSFGNNKEAIED--FDKAIELNYNLEEAYYVRGNT 120

Query: 149 AAS--DFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHV 206
            AS  D+  +  D ++A +V P+ +D+YY     +   G Y+EA++  DK I  N +F  
Sbjct: 121 KASLKDYKGSIEDYNKAVEVYPHFSDAYYNMALSHNAIGNYKEAIKAYDKAIEYNSHFAD 180

Query: 207 ARAQRHFVVHKMIVPGDRERVEQSLKEFRNFVDTHSNVVEACTLFAQVLVDQEDFDGAEE 266
           A   R  V  K+          +++ ++ N +  + N +EA    A    + +++ G+ E
Sbjct: 181 AYNNRGNVKEKL------GYYNEAIDDYTNALHLNRNFIEAYFNRANAKFNIKNYKGSIE 234

Query: 267 YFNRSIRVDPENASLYVHRAMLMLQARGNVDEAIKLIEKAISIDKSCMFAYETLGTIEVQ 326
            F+  I++DP  +  Y +R ++        D AI+  +K I ++     AY         
Sbjct: 235 DFDEIIKIDPTYSKAYYNRGIVKTSMEEYKD-AIEDFDKVIELEPKFPDAYYNKAVAINH 293

Query: 327 RGRLEEAVKCFNKALPLARDEAELSHIYSLRDAAIAQMKVCERYNIKKKVSPRSQN 382
            G  +EAV+ ++KA+ L  + AE     S  + AI++ K+   Y  K KVS    N
Sbjct: 294 LGIYDEAVEFYDKAIELNPNYAE-----SYCNRAISKSKMA--YIRKDKVSTDEYN 342



 Score = 63.9 bits (154), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 68/273 (24%), Positives = 119/273 (43%), Gaps = 23/273 (8%)

Query: 257 DQEDFDGAEEYFNRSIRVDPENASLYVHRAMLMLQARGNVDE------AIKLIEKAISID 310
           + +D+  A +YF+ +I++DP +A  Y +R      A+ N+D+      AI+    AI+++
Sbjct: 18  NDKDYKTAIDYFSEAIKLDPNSAETYYNRG----NAKANLDDKKLYKSAIEDYSWAINLN 73

Query: 311 KSCMFAYETLGTIEVQRGRLEEAVKCFNKALPLARDEAELSHIYSLRDAAIAQMK-VCER 369
                AY   G +    G  +EA++ F+KA+ L  +  E  ++     A++   K   E 
Sbjct: 74  DKFAAAYYNRGILNRSFGNNKEAIEDFDKAIELNYNLEEAYYVRGNTKASLKDYKGSIED 133

Query: 370 YNIKKKVSPRSQNITKNEKL---AIKQLRENNDIIIRPADKGGKTVVMDKADYTQKMTSI 426
           YN   +V P   +   N  L   AI   +E     I+  DK  +        Y  +    
Sbjct: 134 YNKAVEVYPHFSDAYYNMALSHNAIGNYKE----AIKAYDKAIEYNSHFADAYNNRGNVK 189

Query: 427 LNSNDYEIIPGDPTKTIEESEKYGNLE---NESGQKHAASDFTKAFADLDEAEKVDPNVA 483
                Y     D T  +  +  +  +E   N +  K    ++  +  D DE  K+DP  +
Sbjct: 190 EKLGYYNEAIDDYTNALHLNRNF--IEAYFNRANAKFNIKNYKGSIEDFDEIIKIDPTYS 247

Query: 484 DSYYQRGQIYCLFGQYEEALRNLDKTIALNPNF 516
            +YY RG +     +Y++A+ + DK I L P F
Sbjct: 248 KAYYNRGIVKTSMEEYKDAIEDFDKVIELEPKF 280


>gi|113474031|ref|YP_720092.1| group 1 glycosyl transferase [Trichodesmium erythraeum IMS101]
 gi|110165079|gb|ABG49619.1| glycosyl transferase, group 1 [Trichodesmium erythraeum IMS101]
          Length = 3301

 Score = 70.1 bits (170), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 45/181 (24%), Positives = 97/181 (53%), Gaps = 8/181 (4%)

Query: 162  EAEKVDPNVADSYYQRGQIYCLF-GQYEEALRNLDKTIALNPNFHVARAQRHFVVHKMIV 220
            +A K++PN + + Y+ G I  L  G+ EEA+    K + ++P       + ++ +  + V
Sbjct: 1729 QALKLNPNDSGANYEMGNILALLPGKLEEAITYYYKALEIDPYL----TEAYYSLANIFV 1784

Query: 221  PGDRERVEQSLKEFRNFVDTHSNVVEACTLFAQVLVDQEDFDGAEEYFNRSIRVDPENAS 280
              ++ ++++++  ++  ++   N+ E       +L++QE+F         +I+++P ++ 
Sbjct: 1785 --NQNQLKKAVIIYKKLIEIQPNIWENYHNLGNILIEQENFSEGISALYYAIKLNPSSSI 1842

Query: 281  LYVHRAMLMLQARGNVDEAIKLIEKAISIDKSCMFAYETLGTIEVQRGRLEEAVKCFNKA 340
             Y+  A ++ ++ G + EAI   +K I ID +   AY+ LG I   +G  EEA+K + KA
Sbjct: 1843 SYLKLAEILAKS-GKLSEAINAYQKVIFIDPNLAEAYQYLGDILRNKGEKEEAIKVYRKA 1901

Query: 341  L 341
            +
Sbjct: 1902 I 1902



 Score = 58.5 bits (140), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 90/430 (20%), Positives = 188/430 (43%), Gaps = 49/430 (11%)

Query: 105  ATVYIFTSQSTKAIEDLTQLVEDTSVDPKIKVNAHIKRAVVHLHAASDFTKAFADLDEAE 164
            A +++  +Q  KA+    +L+E   + P I  N H    +  L    +F++  + L  A 
Sbjct: 1780 ANIFVNQNQLKKAVIIYKKLIE---IQPNIWENYHNLGNI--LIEQENFSEGISALYYAI 1834

Query: 165  KVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQRHFVVHKMIVPGDR 224
            K++P+ + SY +  +I    G+  EA+    K I ++PN  +A A ++         GD 
Sbjct: 1835 KLNPSSSISYLKLAEILAKSGKLSEAINAYQKVIFIDPN--LAEAYQYL--------GDI 1884

Query: 225  ER----VEQSLKEFRNFVDTHSNVVEACTLFAQVLVDQEDFDGAEEYFNRSIRVDPENAS 280
             R     E+++K +R  ++    +         +  + E  + A   + +SI ++P+   
Sbjct: 1885 LRNKGEKEEAIKVYRKAIEIQPQLWTVHHKLGSLFQETEKLEAATNAYRKSIELNPDFCW 1944

Query: 281  LYVHRAMLMLQARGNVDEAIKLIEKAISIDKSCMFAYETLGTIEVQRGRLEEAVKCFNKA 340
             Y +   ++++      EA     +AI ++    ++Y  LG + V+  +  EA   +++A
Sbjct: 1945 SYNNLGDVLVRLE-KWSEAAGAYGRAIELNPDFCWSYNNLGDVLVRLEKWPEAAGVYHQA 2003

Query: 341  LPLARDEAELSHIYSLRDAAIAQMKVCERYNIKKKVSPRSQNITKNEKLAIKQLRENNDI 400
            + L  D     + Y+L D  +      +  + +  +   SQ +    KL + + ++  D 
Sbjct: 2004 IELNPDFP--WNYYNLGDVLV------KLEDWEGAIIAYSQALEF--KLELPEAKQKLDN 2053

Query: 401  IIRPADKGGKTVVMDKADYTQKMTSILNSND-----YEIIPGDPTKTIEESEKYGNLENE 455
             +    K G   V++   Y + +    N+ +      EI P +P       E Y  L N 
Sbjct: 2054 ALHQKVKSGLQSVLNY--YLRAIEQEPNNVENYFKAIEIEPNNP-------ELYFGLGNV 2104

Query: 456  SGQKHAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPN 515
              +K    +F +A    ++A  ++PN+   Y    +++   G+ +EA  +  K ++L  +
Sbjct: 2105 WLEK---KEFDQAITSYEKAIDINPNLGKVYQNLARVFQEKGREKEARESWFKALSLEAS 2161

Query: 516  FHVARAQRHF 525
              +A A++HF
Sbjct: 2162 --LATAEQHF 2169



 Score = 52.4 bits (124), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 90/411 (21%), Positives = 172/411 (41%), Gaps = 50/411 (12%)

Query: 119  EDLTQLVEDTSVDPKIKVNAHIKRAVVHLHAASDFTKAFADLDEAEKVDPNVADSYYQRG 178
            E ++ L     ++P   + +++K A + L  +   ++A     +   +DPN+A++Y   G
Sbjct: 1825 EGISALYYAIKLNPSSSI-SYLKLAEI-LAKSGKLSEAINAYQKVIFIDPNLAEAYQYLG 1882

Query: 179  QIYCLFGQYEEALRNLDKTIALNPNFHVARAQRHFVVHKM-IVPGDRERVEQSLKEFRNF 237
             I    G+ EEA++   K I + P       Q   V HK+  +  + E++E +   +R  
Sbjct: 1883 DILRNKGEKEEAIKVYRKAIEIQP-------QLWTVHHKLGSLFQETEKLEAATNAYRKS 1935

Query: 238  VDTHSNVVEACTLFAQVLVDQEDFDGAEEYFNRSIRVDPENASLYVHRAMLMLQARGNVD 297
            ++ + +   +      VLV  E +  A   + R+I ++P+    Y +   ++++      
Sbjct: 1936 IELNPDFCWSYNNLGDVLVRLEKWSEAAGAYGRAIELNPDFCWSYNNLGDVLVRLE-KWP 1994

Query: 298  EAIKLIEKAISIDKSCMFAYETLGTIEVQRGRLEEAVKCFNKALPLARDEAELSHIYSLR 357
            EA  +  +AI ++    + Y  LG + V+    E A+  +++AL     + EL       
Sbjct: 1995 EAAGVYHQAIELNPDFPWNYYNLGDVLVKLEDWEGAIIAYSQALEF---KLELPEAKQKL 2051

Query: 358  DAAIAQMKVCERYNIKKKVSPRSQNITKNEKLAIKQLRENND-----IIIRPADK----G 408
            D A+ Q           KV    Q++      AI+Q   N +     I I P +     G
Sbjct: 2052 DNALHQ-----------KVKSGLQSVLNYYLRAIEQEPNNVENYFKAIEIEPNNPELYFG 2100

Query: 409  GKTVVMDKADYTQKMTSILNSNDYEIIPGDPTKTIEESEKYGNLENESGQKHAASDFTKA 468
               V ++K ++ Q +TS   + D     G   + +         + +  +K A   + KA
Sbjct: 2101 LGNVWLEKKEFDQAITSYEKAIDINPNLGKVYQNLARV-----FQEKGREKEARESWFKA 2155

Query: 469  F---ADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNF 516
                A L  AE+        ++  G  +    Q+ EA+    + IALNP+F
Sbjct: 2156 LSLEASLATAEQ--------HFNLGSEFLQEEQHREAVTCYRRAIALNPSF 2198



 Score = 51.2 bits (121), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 54/214 (25%), Positives = 94/214 (43%), Gaps = 12/214 (5%)

Query: 162  EAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQRH-FVVHKMIV 220
            +A K  P+ + +    G ++   GQ E A     K I   PNF  A A      V K   
Sbjct: 867  QALKSQPDYSPACKTLGNVFYAQGQIETAWYWYTKAIEYQPNFAEAYANLGTLSVKKEQW 926

Query: 221  PGDRERVEQSLKEFRNFVDTHSNVVEACTLFAQVLVDQEDFDGAEEYFNR-SIRVDPENA 279
                   +++LK    F   + N+            + E F    EY    + ++ PEN 
Sbjct: 927  QEAISYYQKALKIQPKFAGVYRNLARIYQKIGSY-TEAEKFSIKAEYLEPVNQKITPENQ 985

Query: 280  ----SLYVHRAMLMLQARGNVDEAIKLIEKAISIDKSCMFAYETLGTIEVQRGRLEEAVK 335
                +LY  +    LQ++G V+ A +  +K +S++K+    Y  +G++  Q+ +  EA+K
Sbjct: 986  AIKLTLYYKKLGKRLQSQGEVEAAWQSYKKFLSLEKNDPEIYLNIGSLYAQQEQWIEAIK 1045

Query: 336  CFNKALPLARDEAELSHIYSLRDAAIAQMKVCER 369
            C+ K+L +  + A+     + R  AIA  KV ++
Sbjct: 1046 CYQKSLVIQPNYAD-----AYRQLAIAWRKVGKK 1074



 Score = 46.6 bits (109), Expect = 0.033,   Method: Compositional matrix adjust.
 Identities = 44/202 (21%), Positives = 91/202 (45%), Gaps = 20/202 (9%)

Query: 149 AASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNP------ 202
           AA  + +A       ++V+ N+   +YQ+G    L G Y+    +  K IAL P      
Sbjct: 32  AAFYYQQALNQNPNLQQVNYNLGIIHYQQGD---LLGAYQ----SYKKAIALKPDDINAY 84

Query: 203 -NFHVARAQRHFVVHKMIVPGDRERVEQSLKEFRNFVDTHSNVVEACTLFAQVLVDQEDF 261
            N  +    +  ++    +   ++ +  S  E  N    H  +V   + +  +L+ Q   
Sbjct: 85  YNLGIVLQNQGLLISA--IDSYQQAINLSKSEKSN---PHETIVNCYSNWGCILLHQGQS 139

Query: 262 DGAEEYFNRSIRVDPENASLYVHRAMLMLQARGNVDEAIKLIEKAISIDKSCMFAYETLG 321
           D A   F  ++ + P++ ++Y +    +LQ +  +D+AI  ++K++ ++     +   LG
Sbjct: 140 DAAIAVFKEALLLKPDDFTIYNNIGQALLQ-KSQLDQAITYLKKSLKLEPQFTISLYHLG 198

Query: 322 TIEVQRGRLEEAVKCFNKALPL 343
            +   +G  E+AVK F + + L
Sbjct: 199 QVYQSQGLHEKAVKYFQQIIEL 220



 Score = 43.9 bits (102), Expect = 0.23,   Method: Compositional matrix adjust.
 Identities = 57/241 (23%), Positives = 91/241 (37%), Gaps = 65/241 (26%)

Query: 292  ARGNVDEAIKLIEKAISIDKSCMFAYETLGTIEVQRGRLEEAVKCFNKALPLARDEA--- 348
            A+G ++ A     KAI    +   AY  LGT+ V++ + +EA+  + KAL +    A   
Sbjct: 888  AQGQIETAWYWYTKAIEYQPNFAEAYANLGTLSVKKEQWQEAISYYQKALKIQPKFAGVY 947

Query: 349  -ELSHIYSLRDAAIAQMKVCERYNIKKK-VSPRSQNITKNEKLAIKQLRENNDIIIRPAD 406
              L+ IY      I      E+++IK + + P +Q IT                   P +
Sbjct: 948  RNLARIYQ----KIGSYTEAEKFSIKAEYLEPVNQKIT-------------------PEN 984

Query: 407  KGGKTVVMDKADYTQKMTSILNSNDYEIIPGDPTKTIEESEKYGNLENESGQKHAASDFT 466
            +  K  +     Y +K+   L S                           G+  AA    
Sbjct: 985  QAIKLTL-----YYKKLGKRLQS--------------------------QGEVEAAWQSY 1013

Query: 467  KAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQRHFV 526
            K F  L   EK DP +   Y   G +Y    Q+ EA++   K++ + PN+  A  Q    
Sbjct: 1014 KKFLSL---EKNDPEI---YLNIGSLYAQQEQWIEAIKCYQKSLVIQPNYADAYRQLAIA 1067

Query: 527  W 527
            W
Sbjct: 1068 W 1068



 Score = 40.8 bits (94), Expect = 1.8,   Method: Compositional matrix adjust.
 Identities = 93/429 (21%), Positives = 166/429 (38%), Gaps = 72/429 (16%)

Query: 153  FTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNP-NFHVA---R 208
            + +A +   +A K+ P  A  Y    +IY   G Y EA +   K   L P N  +    +
Sbjct: 926  WQEAISYYQKALKIQPKFAGVYRNLARIYQKIGSYTEAEKFSIKAEYLEPVNQKITPENQ 985

Query: 209  AQRHFVVHKMIVPGDRER----VEQSLKEFRNFVDTHSNVVEACTLFAQVLVDQEDFDGA 264
            A +  + +K +  G R +    VE + + ++ F+    N  E       +   QE +  A
Sbjct: 986  AIKLTLYYKKL--GKRLQSQGEVEAAWQSYKKFLSLEKNDPEIYLNIGSLYAQQEQWIEA 1043

Query: 265  EEYFNRSIRVDPENASLYVHRAMLMLQARGNVDEAIKLIEKAISIDKSCMFAYE--TLGT 322
             + + +S+ + P  A  Y   A+   +  G   +    + +A S++     A E   LG 
Sbjct: 1044 IKCYQKSLVIQPNYADAYRQLAIAWRKV-GKKTKGDNCLYQAYSLEPGKATAEEHLILGN 1102

Query: 323  IEVQRGRLEEAVKCFNKALPLARD----EAELSHIYSLRDAAIAQMKVCERY--NIKKKV 376
              +Q+  + +A+ C+ +A+ L  +       L     L+       KV   Y  N++  +
Sbjct: 1103 SLLQQKVISQAISCYCRAIELNPNLLGAYESLGEALKLQGTKKPTTKVFPNYWQNLENSL 1162

Query: 377  SPRSQNITKNEKLAIKQLRENNDIII--------RPADKGGKTVV---------MDKADY 419
            +       +N +  I+Q+R ++ I I        R   KG   V+          D  +Y
Sbjct: 1163 NLLIGENHQNSQGIIQQVRADDTIHIIQKPENFQRVVSKGVSRVISTFDLKSDLSDSVNY 1222

Query: 420  TQKMTSIL-NSNDYEIIP-GDPTKTIEESEK----------YGNLENE-----SGQKHAA 462
             +   S+L NS D  +    + TKT+  ++           YGN+E E     S +K   
Sbjct: 1223 LESSLSVLENSQDKRVTNYKEITKTLAPNKPLIIEADVTNVYGNIEGEKTVMNSPKKANN 1282

Query: 463  SDFTKAFADLDEAEKVDP-------------------NVADSYYQRGQIYCLFGQYEEAL 503
            +    +   L E  KV+                    N+ + Y Q  Q Y   G YE+A+
Sbjct: 1283 NQIIHSTLKLKEISKVNEVKQINSTFLLKDMTSNGVRNIPNVYIQEAQKYYEEGFYEKAI 1342

Query: 504  RNLDKTIAL 512
                + I+L
Sbjct: 1343 SQCQQAISL 1351



 Score = 40.0 bits (92), Expect = 3.5,   Method: Compositional matrix adjust.
 Identities = 58/272 (21%), Positives = 115/272 (42%), Gaps = 35/272 (12%)

Query: 246  EACTLFAQVLVDQEDFDGAEEYFNRSIRVDPENASLYVHRAMLMLQARGNVDEAIKLIEK 305
            EA  +  +    +   D A   + ++++++P ++        ++    G ++EAI    K
Sbjct: 1705 EAYQIMGKAFQQKNQLDNAINCYAQALKLNPNDSGANYEMGNILALLPGKLEEAITYYYK 1764

Query: 306  AISIDKSCMFAYETLGTIEVQRGRLEEAVKCFNKALPLARDEAELSHIYSLRDAAIAQMK 365
            A+ ID     AY +L  I V + +L++AV  + K + +  +  E  H  +L +  I    
Sbjct: 1765 ALEIDPYLTEAYYSLANIFVNQNQLKKAVIIYKKLIEIQPNIWENYH--NLGNILI---- 1818

Query: 366  VCERYNIKKKVSPRSQNITKNEKLAIKQLRENNDIIIRPADKGGKTVVMDKADYTQKMTS 425
              E+ N  + +S     I  N   +I  L+     +     K GK  + +  +  QK+  
Sbjct: 1819 --EQENFSEGISALYYAIKLNPSSSISYLK-----LAEILAKSGK--LSEAINAYQKVIF 1869

Query: 426  ILNSNDYEIIPGDPTKTIEESEKY-GNLENESGQKHAASDFTKAFADLDEAEKVDPNVAD 484
            I           DP   + E+ +Y G++    G+K  A    +      +A ++ P +  
Sbjct: 1870 I-----------DP--NLAEAYQYLGDILRNKGEKEEAIKVYR------KAIEIQPQLWT 1910

Query: 485  SYYQRGQIYCLFGQYEEALRNLDKTIALNPNF 516
             +++ G ++    + E A     K+I LNP+F
Sbjct: 1911 VHHKLGSLFQETEKLEAATNAYRKSIELNPDF 1942


>gi|428300288|ref|YP_007138594.1| hypothetical protein Cal6303_3698 [Calothrix sp. PCC 6303]
 gi|428236832|gb|AFZ02622.1| Tetratricopeptide TPR_2 repeat-containing protein [Calothrix sp.
           PCC 6303]
          Length = 879

 Score = 70.1 bits (170), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 63/278 (22%), Positives = 118/278 (42%), Gaps = 67/278 (24%)

Query: 151 SDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQ 210
           ++ +++    D+A ++ PN   ++Y RG +Y     Y+E+L++ DK++ + PNF  A   
Sbjct: 570 TNTSESIQSFDKAIQLRPNFYQAWYLRGFVYMTQNNYQESLKSFDKSVQIEPNFSTAWRW 629

Query: 211 RHFVVHKM---------------IVPGDR--------------------ERVEQSLKEFR 235
           R  ++  +               + PGD                     E  E+SLK++ 
Sbjct: 630 RGMILANLNKYQEALACFEQLAKLDPGDSGAQTFRSIMLIGLQRFPEALEIAEKSLKQYP 689

Query: 236 NFVDTHSNVV----------------EACTLFAQVLVD------------QEDFDGAEEY 267
           N  +  +  +                EA  L  + + D            Q D  GA   
Sbjct: 690 NSWNYFARGIARFGTKDQKGALADLNEAIRLNPEAIEDTAYSVRATIRYAQGDIQGALTD 749

Query: 268 FNRSIRVDPENASLYVHRAMLMLQARGNVDEAIKLIEKAISIDKSCMFAYETLGTIEVQR 327
           +N +IR++P+ A   + RA + LQ + +   A+  + +AI +      A+E  GT+   +
Sbjct: 750 YNEAIRLNPQKAEPILSRAAIHLQQK-DYKSAVVDLNEAIRLKPEYREAFELRGTLYFLQ 808

Query: 328 GRLEEAVKCFNKALPLARDEAELSHIYSLRDAAIAQMK 365
            + +EAVK   +A+   R  ++   +YS+R  A  Q+K
Sbjct: 809 NKHQEAVKDLTQAI---RLNSQNPDVYSIRGGAWLQLK 843



 Score = 47.8 bits (112), Expect = 0.016,   Method: Compositional matrix adjust.
 Identities = 36/122 (29%), Positives = 61/122 (50%), Gaps = 13/122 (10%)

Query: 80  AIRHCTEEIESTSSNHTKALARLLRATVYIFTSQSTKAIEDLTQLVEDTSVDPKIKVNAH 139
           AIR   E IE T        A  +RAT+         A+ D  + +    ++P+ K    
Sbjct: 717 AIRLNPEAIEDT--------AYSVRATIRYAQGDIQGALTDYNEAIR---LNPQ-KAEPI 764

Query: 140 IKRAVVHLHAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIA 199
           + RA +HL    D+  A  DL+EA ++ P   +++  RG +Y L  +++EA+++L + I 
Sbjct: 765 LSRAAIHLQQ-KDYKSAVVDLNEAIRLKPEYREAFELRGTLYFLQNKHQEAVKDLTQAIR 823

Query: 200 LN 201
           LN
Sbjct: 824 LN 825



 Score = 46.2 bits (108), Expect = 0.049,   Method: Compositional matrix adjust.
 Identities = 18/64 (28%), Positives = 37/64 (57%)

Query: 463 SDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQ 522
           ++ +++    D+A ++ PN   ++Y RG +Y     Y+E+L++ DK++ + PNF  A   
Sbjct: 570 TNTSESIQSFDKAIQLRPNFYQAWYLRGFVYMTQNNYQESLKSFDKSVQIEPNFSTAWRW 629

Query: 523 RHFV 526
           R  +
Sbjct: 630 RGMI 633



 Score = 45.8 bits (107), Expect = 0.064,   Method: Compositional matrix adjust.
 Identities = 62/264 (23%), Positives = 115/264 (43%), Gaps = 35/264 (13%)

Query: 268 FNRSIRVDPENASLYVHRAMLMLQARGNVDEAIKLIEKAISIDKSCMFAYETLGTIEVQR 327
           F+++I++ P     +  R  + +  + N  E++K  +K++ I+ +   A+   G I    
Sbjct: 579 FDKAIQLRPNFYQAWYLRGFVYM-TQNNYQESLKSFDKSVQIEPNFSTAWRWRGMILANL 637

Query: 328 GRLEEAVKCFNKALPLARDEAELSHIYSLRDAA-IAQMKVCERYNIKKKV---SPRSQNI 383
            + +EA+ CF +   LA+ +   S   + R    I   +  E   I +K     P S N 
Sbjct: 638 NKYQEALACFEQ---LAKLDPGDSGAQTFRSIMLIGLQRFPEALEIAEKSLKQYPNSWNY 694

Query: 384 ---------TKNEKLAIKQLRE----NNDIIIRPADKGGKTVVMDKADYTQKMTSILNSN 430
                    TK++K A+  L E    N + I   A     T+   + D    +T      
Sbjct: 695 FARGIARFGTKDQKGALADLNEAIRLNPEAIEDTAYSVRATIRYAQGDIQGALT------ 748

Query: 431 DY-EIIPGDPTKTIEESEKYGNLENESGQKHAASDFTKAFADLDEAEKVDPNVADSYYQR 489
           DY E I  +P       +K   + + +       D+  A  DL+EA ++ P   +++  R
Sbjct: 749 DYNEAIRLNP-------QKAEPILSRAAIHLQQKDYKSAVVDLNEAIRLKPEYREAFELR 801

Query: 490 GQIYCLFGQYEEALRNLDKTIALN 513
           G +Y L  +++EA+++L + I LN
Sbjct: 802 GTLYFLQNKHQEAVKDLTQAIRLN 825


>gi|118350024|ref|XP_001008293.1| TPR Domain containing protein [Tetrahymena thermophila]
 gi|89290060|gb|EAR88048.1| TPR Domain containing protein [Tetrahymena thermophila SB210]
          Length = 373

 Score = 70.1 bits (170), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 45/185 (24%), Positives = 92/185 (49%), Gaps = 7/185 (3%)

Query: 165 KVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQRHFVVHKMIVPGDR 224
           +++PN     Y  G I    G+YE A +   K I LNP      A  +F +   +     
Sbjct: 159 EINPNFKSVVYNLGIISEKLGEYENAKQFYQKAIQLNPQ----DANTYFNLG--VTYEKM 212

Query: 225 ERVEQSLKEFRNFVDTHSNVVEACTLFAQVLVDQEDFDGAEEYFNRSIRVDPENASLYVH 284
           + VE++ K +          + A      +  D   F  A++ F   I++DP+N   Y +
Sbjct: 213 KNVEEARKCYLKVQQLEPKSIYALNNLGAIYFDLGQFQEAQKCFEDIIKIDPQNFGAYYN 272

Query: 285 RAMLMLQARGNVDEAIKLIEKAISIDKSCMFAYETLGTIEVQRGRLEEAVKCFNKALPLA 344
            + + ++ +GN++E+I+ ++K I I+   + A++ LG I   +G+ +EA++C+ +A+ + 
Sbjct: 273 LSAIYIK-KGNIEESIQCLQKTIQINPEYINAHKQLGQIFYTKGQFDEAIQCYQQAIKIN 331

Query: 345 RDEAE 349
             +++
Sbjct: 332 SQDSD 336



 Score = 44.3 bits (103), Expect = 0.15,   Method: Compositional matrix adjust.
 Identities = 42/206 (20%), Positives = 96/206 (46%), Gaps = 29/206 (14%)

Query: 160 LDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQRHFVVHKMI 219
           L +A +++P   +++   G +Y   G+ ++A   + K + +NP    +  +  ++   M 
Sbjct: 52  LLKALEINPQFENAHTSLGYLYKKIGKPQKAKECILKALEINPKSVFSLLELGYLYEDMN 111

Query: 220 VPGDRERVEQSLKEF--RNFVDTHS--------NVV-EACTLFAQVLVDQEDF------- 261
           +  ++++    + +   +NF   +         N++ EA   F QVL    +F       
Sbjct: 112 MQDEQKQTYMKILQIEPKNFEAQYGLGLYYFKQNMLQEARHWFLQVLEINPNFKSVVYNL 171

Query: 262 ----------DGAEEYFNRSIRVDPENASLYVHRAMLMLQARGNVDEAIKLIEKAISIDK 311
                     + A++++ ++I+++P++A+ Y +  +   + + NV+EA K   K   ++ 
Sbjct: 172 GIISEKLGEYENAKQFYQKAIQLNPQDANTYFNLGVTYEKMK-NVEEARKCYLKVQQLEP 230

Query: 312 SCMFAYETLGTIEVQRGRLEEAVKCF 337
             ++A   LG I    G+ +EA KCF
Sbjct: 231 KSIYALNNLGAIYFDLGQFQEAQKCF 256


>gi|434405897|ref|YP_007148782.1| tetratricopeptide repeat protein,HTH domain-containing protein
           [Cylindrospermum stagnale PCC 7417]
 gi|428260152|gb|AFZ26102.1| tetratricopeptide repeat protein,HTH domain-containing protein
           [Cylindrospermum stagnale PCC 7417]
          Length = 894

 Score = 70.1 bits (170), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 72/328 (21%), Positives = 150/328 (45%), Gaps = 28/328 (8%)

Query: 23  SKQFIKTYLKSFPNDPILQPDGLSNGVELTNGDTNESHELDLLSKAKRAFEHEDYLTAIR 82
           +K+ +K  L+  P D  ++ D + + +++   +  +    + L     +FE++DYL    
Sbjct: 390 TKEELKQRLEILPPDAEIERDYILHALQIIEEEPEDPRIAEYLKDVFASFENKDYL---- 445

Query: 83  HCTEEIESTSSNHTKALARLLRATVYIFTSQSTKAIEDLTQLVEDTSVDPKIKVNAHIKR 142
           HC +  +   +    A    +   +        +A+  + + ++   +DP  K++  ++ 
Sbjct: 446 HCLKIADKLIAIRGYANDWFIHGCILHEFKHYEQALLSIDKAID---IDPNQKLSWLLRG 502

Query: 143 AVVHLHAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNP 202
             + L    D+ +A    ++  ++D N  D++Y+RG+I     QY+EAL++ +K   LN 
Sbjct: 503 --LTLDETEDYEEALTSYNKVIELDQNYVDAWYRRGRILKNIKQYDEALKSYNKVTKLND 560

Query: 203 NFHVARAQRHFVVHKMIVPGDRERVEQSLKEFRNFV-------DTHSNVVEACTLFAQVL 255
           N   A     +++   I+  + E  +++L+ F   +       D + N + AC      L
Sbjct: 561 NHEGA-----WLLRGEILLYNLEHYDEALESFYKAMEINQDEKDIYWNYISAC------L 609

Query: 256 VDQEDFDGAEEYFNRSIRVDPENASLYVHRAMLMLQARGNVDEAIKLIEKAISIDKSCMF 315
                ++ A E+ ++ I ++P  A  + +R   ML      D+A++   KA+ I+     
Sbjct: 610 SGIGQYEAALEFCDKLIELEPNEAIYWANRGA-MLTNLERYDQALESYNKAVDINPFDAK 668

Query: 316 AYETLGTIEVQRGRLEEAVKCFNKALPL 343
           A+   G I +     EEA+  FNKA+ L
Sbjct: 669 AWYDRGNILLNLECDEEALVSFNKAIKL 696



 Score = 41.6 bits (96), Expect = 1.2,   Method: Compositional matrix adjust.
 Identities = 74/391 (18%), Positives = 151/391 (38%), Gaps = 76/391 (19%)

Query: 123 QLVEDTSVDPKIKVNAHIKRAVVHLHAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYC 182
           Q++E+   DP+I   A   + V       D+       D+   +    A+ ++  G I  
Sbjct: 417 QIIEEEPEDPRI---AEYLKDVFASFENKDYLHCLKIADKLIAI-RGYANDWFIHGCILH 472

Query: 183 LFGQYEEALRNLDKTIALNPNFHVARAQRHFVVHKMIVPGDRERVEQSLKEFRNFVDTHS 242
            F  YE+AL ++DK I ++PN  ++   R   +       + E  E++L  +   ++   
Sbjct: 473 EFKHYEQALLSIDKAIDIDPNQKLSWLLRGLTL------DETEDYEEALTSYNKVIELDQ 526

Query: 243 NVVEACTLFAQVLVDQEDFDGAEEYFNRSIRVDPENASLYVHRAMLMLQARGNVDEAIKL 302
           N V+A     ++L + + +D A + +N+  +++  +   ++ R  ++L    + DEA++ 
Sbjct: 527 NYVDAWYRRGRILKNIKQYDEALKSYNKVTKLNDNHEGAWLLRGEILLYNLEHYDEALE- 585

Query: 303 IEKAISIDKSCMFAYETLGTIEVQRGRLEEAVKCFNKALPLARDEAELSHIYSLRDAAIA 362
                                             F KA+ + +DE ++   Y       A
Sbjct: 586 ---------------------------------SFYKAMEINQDEKDIYWNY-----ISA 607

Query: 363 QMKVCERYNIKKKVSPRSQNITKNEKLAIKQLRENNDIIIRPADKGGKTVVMDKADYTQK 422
            +    +Y    +   +   +  NE              I  A++G     +++  Y Q 
Sbjct: 608 CLSGIGQYEAALEFCDKLIELEPNEA-------------IYWANRGAMLTNLER--YDQA 652

Query: 423 MTSILNSNDYEIIPGDPTKTIEESEKYGNLENESGQKHAASDFTKAFADLDEAEKVDPNV 482
           + S   + D  I P D     +      NLE +           +A    ++A K+D   
Sbjct: 653 LESYNKAVD--INPFDAKAWYDRGNILLNLECDE----------EALVSFNKAIKLDSTD 700

Query: 483 ADSYYQRGQIYCLFGQYEEALRNLDKTIALN 513
            +++ +R  I     +Y+E+L +  +TIAL 
Sbjct: 701 VNTWLKRSLILYDLERYDESLESSKQTIALG 731



 Score = 40.4 bits (93), Expect = 2.8,   Method: Compositional matrix adjust.
 Identities = 20/60 (33%), Positives = 34/60 (56%)

Query: 464 DFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQR 523
           D+ +A    ++  ++D N  D++Y+RG+I     QY+EAL++ +K   LN N   A   R
Sbjct: 510 DYEEALTSYNKVIELDQNYVDAWYRRGRILKNIKQYDEALKSYNKVTKLNDNHEGAWLLR 569


>gi|118395435|ref|XP_001030067.1| SLEI family protein [Tetrahymena thermophila]
 gi|89284355|gb|EAR82404.1| SLEI family protein [Tetrahymena thermophila SB210]
          Length = 2406

 Score = 70.1 bits (170), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 93/412 (22%), Positives = 185/412 (44%), Gaps = 65/412 (15%)

Query: 143  AVVHLHAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNP 202
             +V+    +D  KA   L +A ++DPN  ++Y + G +Y +   ++E++ +  K + LNP
Sbjct: 1343 GLVYYQQQND-DKAIECLKKALELDPNFYEAYDKLGLVYKVKKMFDESIIHYKKALELNP 1401

Query: 203  NFHVA-RAQRHFVVHKMIVPGDRERVEQSLKEFRNFVDTHSNVVEACTLFAQVLVDQEDF 261
             F+ A     +  + K ++   +E  EQ  K     +DT+  +       A+V  DQ   
Sbjct: 1402 KFYSAMETVMNMYLDKKMIKEAKEFSEQVPKN----LDTYYKL-------AKVYQDQNML 1450

Query: 262  DGAEEYFNRSIRVDPENASLYVHRAMLMLQARGNVDEAIKLIEKAISIDKSCMFAYETLG 321
            D +  Y+ + +  D +  + Y+      L  +   D+A++  +K I ID +   AY  +G
Sbjct: 1451 DESIVYYKKVLEQDSKYINAYIQLGNAYLD-KPLYDQAMECYQKIIEIDSTKSVAYNNIG 1509

Query: 322  TIEVQRGRLEEAVKCFNKALPLARDEAELSHIYSLRDAAIA------QMKVCERYNIKKK 375
             I +++  L+EA++ FNKA+     E +  ++ S+ ++ +       + K  E YN   +
Sbjct: 1510 LIYLRQNMLDEALEQFNKAI-----EIDPKYVLSIYNSGLVYEKKQQKDKALECYNKALE 1564

Query: 376  VSPRSQNITKNEKLAIKQLRENNDIIIRPADKGGKTVVMDKADYTQKMTSILNSNDYEII 435
            ++P  +N              N   +++ + K  +    DK +  Q+  ++  + DY   
Sbjct: 1565 INPAHKN------------SYNRISVLKKSGKQAQET--DKEE--QQEINLQTAKDY--- 1605

Query: 436  PGDPTKTIEESEKYGNLENESGQKHAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCL 495
                    EE  KY    N+           ++   L++A ++DPN  ++Y + G +   
Sbjct: 1606 -------YEEGYKYYTELNDD----------ESIKCLNKAIELDPNYFEAYDKLGLVLKE 1648

Query: 496  FGQYEEALRNLDKTIALNPNFHVAR--AQRHFVWTSTLAELMAFSDEFMIPK 545
              +YEEA+++  K I +NP    A      +++ +  + E   F D   +PK
Sbjct: 1649 NRKYEEAIQSYKKAIEVNPKCFAAMQAVMNYYLDSKMINEAKEFYD--YVPK 1698



 Score = 69.3 bits (168), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 109/481 (22%), Positives = 202/481 (41%), Gaps = 55/481 (11%)

Query: 72  FEHEDYLTAIRHCTEEIESTSSNHTKALARLLRATVYIFTSQSTKAIEDLTQLVEDTSVD 131
           F+ ++ +     C +++     ++ +AL  L    +Y    Q  +++E L + VE    +
Sbjct: 14  FQKQNLIDEAIECYKKVLEVDYSNVEALYNL--GLIYQSKKQLDESLEFLNKAVEK---N 68

Query: 132 PKIKVNAHIKRAVVHLHAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEAL 191
           P   +NA+I +A  +L       +A   L +A ++DP  A ++ + G  Y      ++A+
Sbjct: 69  PNY-INAYICKAENYLQKKM-IEEAVVCLQKALEIDPKSAKAHERLGFAYKKQNLTDKAI 126

Query: 192 RNLDKTIALNPNFHVARAQRHFV------------VHKMIVPGDRERV------------ 227
             L K I ++PNF  A     F              +K I+  D   V            
Sbjct: 127 DCLKKAIEIDPNFTEAHHNLGFTYESKKMIDQAYDCYKNILNIDPNYVKAYISLARNYYI 186

Query: 228 ----EQSLKEFRNFVDTHSNVVEACTLFAQVLVDQEDFDGAEEYFNRSIRVDPENASLYV 283
               E S+K  +  ++   N VEA      +  +    + + +YF ++I +DP   +   
Sbjct: 187 EYKTEDSIKYLKKAIEMDQNCVEAYERLGYIYQNISKKEESIKYFKKAIEIDPNYFNAQF 246

Query: 284 HRAMLMLQARGNVDEAIKLIEKAISIDKSCMFAYETLGTIEVQRGRLEEAVKCFNKALPL 343
           +  +L  Q + + +EA+   +KAI I+     +Y  +G +   +  + EA++ F KAL +
Sbjct: 247 NLGLLYYQEQKD-NEALTYFQKAIEINPKSSDSYNNIGLVYYHKDMITEALEYFKKALDV 305

Query: 344 ARDEAELSHIYSLRDAAIAQMKVCERYNIKKKVSPRSQNITKNEKLAIKQLRENNDIIIR 403
                +  H   L   A A+  +     I+  +    ++I  N K  +K L    D+ ++
Sbjct: 306 NPLYYKAHHNSGL---AYAKQNL-----IQNAIESYKKSIEINPKF-LKSLTNLGDLCVK 356

Query: 404 P--ADKG----GKTVVMDKA---DYTQKMTSILNSNDYEIIPGDPTKTIEESEKYGNLEN 454
              +D+G     K + ++     DY Q      N +  E       K IE S +Y N   
Sbjct: 357 QNLSDEGIECFKKIIQINPKSHYDYFQLGFLYQNKDMNEEAVKAYKKVIELSPQYTNAHI 416

Query: 455 ESGQKHAASD-FTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALN 513
             G  +     F +A A   +  ++DPN  ++YY+  ++Y L G   EA+    K I +N
Sbjct: 417 NLGVIYFKQKMFDEAQACFKKVIQIDPNCWNAYYRSAEVYQLKGNTTEAIECYKKIIEIN 476

Query: 514 P 514
           P
Sbjct: 477 P 477



 Score = 63.5 bits (153), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 110/553 (19%), Positives = 230/553 (41%), Gaps = 102/553 (18%)

Query: 49  VELTNGDTNESHELDLLSKAKRAFEHEDYLTAIRHCTEEIESTSSNHTKALARLLRATVY 108
           +EL+   TN    L ++   ++ F+        + C +++     N   A  R   A VY
Sbjct: 405 IELSPQYTNAHINLGVIYFKQKMFDE------AQACFKKVIQIDPNCWNAYYR--SAEVY 456

Query: 109 IFTSQSTKAIEDLTQLVEDTSVDPKIKVNAHIKRAVVHLHAASDFTKAFADLDEAEKVDP 168
                +T+AIE   +++E   ++PK  + ++   A++     S + +A A       ++ 
Sbjct: 457 QLKGNTTEAIECYKKIIE---INPK-HIKSYFSLAILKTTQKS-YDEAIACYQSILAIEE 511

Query: 169 NVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQRHFVVHKMIVPGDRERVE 228
           +  D+    G +Y     ++EAL    K + L+ ++++A      +         +  +E
Sbjct: 512 DNLDALNNLGDVYQQQNMFDEALDYFKKILQLDSSYYLAYYNLGTIYE------SKNMLE 565

Query: 229 QSLKEFRNFVDTH----SNVVEACTLFAQVLVDQEDFDGAE------------------- 265
           ++L+ ++   + +    +  V    +++Q  +  E F+                      
Sbjct: 566 EALEYYKKIEEMNPKFIATFVRQGNVYSQKNMQSEAFECYNKVKDSDLKSTFDDDLFIQT 625

Query: 266 -------EYFNRSIRVDPENASLYVHRAMLMLQARGNVDEAIKLIEKAISIDKSCMFAYE 318
                  E + ++I+++P+    + +  +L  QA   ++EAI+    AI +D  C+  Y 
Sbjct: 626 EIIVELIECYEKAIQLNPKYTQAFCNLGLLN-QAIKQMEEAIRFYLAAIELDPKCLKPYL 684

Query: 319 TLGTIEVQRGRLEEAVKCFNKALPLARDEAE-------LSHIYSLRDAAIAQMKVCERYN 371
            LG+I   +G  E+A++CF+KA  +  + AE       + + + + D A+         N
Sbjct: 685 GLGSIYSAKGINEKALECFSKAQEIDANNAETFNSIGFMYYNWKILDQALD--------N 736

Query: 372 IKK--KVSPRSQNITKNEKLAIKQLRENNDII--------IRPADKGGKTVVMDKADYTQ 421
           +KK  +++P  +    N  L  +Q ++N+  +        I+P DK  K  +       Q
Sbjct: 737 LKKALEINPNYELAIYNTGLVYEQKKQNDKALECYQKVLQIKPNDKKAKVRIFQINQKNQ 796

Query: 422 KMTSILNSNDYEIIPGDPTKTIEESEKYG-NLENESGQKHAASDFTKAFADLDEAEKVDP 480
           +             P    +  ++  KY   L++E           ++   L +A ++DP
Sbjct: 797 QEDK---------TPKTAKEFYQQGYKYYIQLKDE-----------QSIECLQKALELDP 836

Query: 481 NVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFH--VARAQRHFVWTSTLAELMAFS 538
           N  ++Y + G IY     +++A+ N  K + +NP+    +      ++    + E  AF 
Sbjct: 837 NYYEAYDKLGLIYKEKKMFDQAIVNFKKVLEINPHCLDIIKTVMNIYLDRKMIDEAKAFY 896

Query: 539 DEFMIPKI--TYY 549
           DE  +PK   TYY
Sbjct: 897 DE--VPKNLDTYY 907



 Score = 60.5 bits (145), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 37/159 (23%), Positives = 75/159 (47%), Gaps = 7/159 (4%)

Query: 188 EEALRNLDKTIALNPNFHVARAQRHFVVHKMIVPGDRERVEQSLKEFRNFVDTHSNVVEA 247
           +E +    K I +NP  H    Q  F+        +++  E+++K ++  ++       A
Sbjct: 361 DEGIECFKKIIQINPKSHYDYFQLGFLYQ------NKDMNEEAVKAYKKVIELSPQYTNA 414

Query: 248 CTLFAQVLVDQEDFDGAEEYFNRSIRVDPENASLYVHRAMLMLQARGNVDEAIKLIEKAI 307
                 +   Q+ FD A+  F + I++DP   + Y +R+  + Q +GN  EAI+  +K I
Sbjct: 415 HINLGVIYFKQKMFDEAQACFKKVIQIDPNCWNAY-YRSAEVYQLKGNTTEAIECYKKII 473

Query: 308 SIDKSCMFAYETLGTIEVQRGRLEEAVKCFNKALPLARD 346
            I+   + +Y +L  ++  +   +EA+ C+   L +  D
Sbjct: 474 EINPKHIKSYFSLAILKTTQKSYDEAIACYQSILAIEED 512



 Score = 56.6 bits (135), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 86/365 (23%), Positives = 152/365 (41%), Gaps = 60/365 (16%)

Query: 160  LDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVAR--AQRHFVVHK 217
            L++A ++DPN  ++Y + G +     +YEEA+++  K I +NP    A      +++  K
Sbjct: 1625 LNKAIELDPNYFEAYDKLGLVLKENRKYEEAIQSYKKAIEVNPKCFAAMQAVMNYYLDSK 1684

Query: 218  MIVPGDRERVEQSLKEFRNFVDTHSNVVEACTLFAQVLVDQEDFDGAEEYFNRSIRVDPE 277
            MI             E + F D      E      +V  DQ   D A   +  +I +D +
Sbjct: 1685 MI------------NEAKEFYDYVPKCAETHYHLGRVYQDQNMLDEAIGSYQNAIELDSK 1732

Query: 278  NASLYVHRAMLMLQARGNVDEAIKLIEKAISIDKSCMFAYETLGTIEVQRGRLEEAVKCF 337
                Y+      L  +   D+A++  +K + ID     AY  +G +   +   +EA++ F
Sbjct: 1733 YIDAYIQLGNAYLD-KPMFDQALETYKKILEIDPQKPVAYNNIGLVYFDQNMNDEALEQF 1791

Query: 338  NKALPLARDEAELSHIYSLRDAAIA------QMKVCERYNIKKKVSPRSQNITKNEKLA- 390
            NKAL +   + EL    SL ++ +A        K  E YN   +++P     T++  LA 
Sbjct: 1792 NKALEI-NPKYEL----SLYNSGLAYERKNQTEKALECYNKVLEINP-----TESRSLAR 1841

Query: 391  -IKQLRENNDIIIRPADKGGKTVVMDKADYTQKMTSILNSNDYEIIPGDPTKTIEESEKY 449
             I  L++NN      +   G   + D  D                    P+      EK+
Sbjct: 1842 KIALLKKNN------SSNTGFDFLKDLQD-----------------KFGPSYKSTAEEKF 1878

Query: 450  GNLENESGQKHAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKT 509
                N++   +   +  K+   L +A ++DPN   +Y   G +Y    +++EA+    K 
Sbjct: 1879 ----NQAFHYYMQMEDDKSIECLKKAIEIDPNYYAAYEMLGFVYSKKKKFDEAIEFYQKG 1934

Query: 510  IALNP 514
            I +NP
Sbjct: 1935 IKVNP 1939



 Score = 56.2 bits (134), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 90/426 (21%), Positives = 174/426 (40%), Gaps = 66/426 (15%)

Query: 105  ATVYIFTSQSTKAIEDLTQLVEDTSVDPKIKVNAHIKRAVVHLHAASDFTKAFADLDEAE 164
              +Y+  ++  +A+E   ++++   ++P+ K  A+    +VH     D  KA    ++A 
Sbjct: 2013 GNLYLGKAEYDQALECYQKIIQ---INPQ-KAVAYNNIGLVHYKQKMD-DKAIEYYNKAL 2067

Query: 165  KVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQRHFVVHKMIVPGDR 224
            ++DPN   SYY  G +Y     +++AL    K + +NP     + ++      +I   + 
Sbjct: 2068 ELDPNYDLSYYNSGLVYEQKKDFDKALECYKKVLQINP-----KDKKTLNRINLIKKNNG 2122

Query: 225  ERVEQSLKEFRNFVDTHSNVVEACTLFAQVLVDQEDFDGAEEYFNRSIRVDPENASLYVH 284
            ++++   +E     D  S   +    +      ++D   AE+Y+N+  +          +
Sbjct: 2123 DKIDNQAQE-----DEGSEPEDYDDDYEDGDEQKKDLQTAEDYYNQGFKY---------Y 2168

Query: 285  RAMLMLQARGNVDEAIKLIEKAISIDKSCMFAYETLGTIEVQRGRLEEAVKCFNKALPLA 344
              M          E IK ++KAI ID     AY+ LG +  +  + EEA++C+ KA+   
Sbjct: 2169 NQM-------KDQECIKCLKKAIEIDPKYSEAYDKLGLVYEENEQFEEAIECYKKAIE-- 2219

Query: 345  RDEAELSHIYSLRDAAIAQMKVCERYNIKKKVSPRSQNITKNEKLAIKQLRENNDIIIRP 404
                 L  I +L    I Q    E       VS +S +I       + ++ E+  ++   
Sbjct: 2220 HKPNNLDCISALMTIYINQKMTDEAKEFYNSVS-QSADIY----YELGRVYEDKSMVDEA 2274

Query: 405  ADKGGKTVVMD----------------KADYTQKMTSILNSNDYEIIPGDPTKTIEESEK 448
                 K + +D                KA Y Q +         +I+  +P   I     
Sbjct: 2275 ISSHKKAIELDPKYVNSYIQLGNIYSEKASYEQAIEYFQ-----KILEIEPNNEI----A 2325

Query: 449  YGNLENESGQKHAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDK 508
            Y N+       +    + +A    ++A +++P    S Y  G +Y    QYE+AL   +K
Sbjct: 2326 YNNI---GLIYYDQGKYDQALEQYNKALEINPKYELSLYNSGLVYEKKDQYEKALEFYNK 2382

Query: 509  TIALNP 514
             +++NP
Sbjct: 2383 VLSINP 2388



 Score = 53.1 bits (126), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 76/380 (20%), Positives = 166/380 (43%), Gaps = 60/380 (15%)

Query: 159  DLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQRHFVVHKM 218
            D +E ++++   A  YY+ G  Y      +E+++ L+K I L+PN+  A  +   V+   
Sbjct: 1590 DKEEQQEINLQTAKDYYEEGYKYYTELNDDESIKCLNKAIELDPNYFEAYDKLGLVLK-- 1647

Query: 219  IVPGDRERVEQSLKEFRNFVDTHSNVVEACTLFAQVLVDQEDFDGAEEYFNRSIRVDPEN 278
                +  + E++++ ++  ++ +     A        +D +  + A+E+++      P+ 
Sbjct: 1648 ----ENRKYEEAIQSYKKAIEVNPKCFAAMQAVMNYYLDSKMINEAKEFYDYV----PKC 1699

Query: 279  ASLYVHRAMLMLQARGNVDEAIKLIEKAISIDKSCMFAYETLGTIEVQRGRLEEAVKCFN 338
            A  + H   +  Q +  +DEAI   + AI +D   + AY  LG   + +   ++A++ + 
Sbjct: 1700 AETHYHLGRVY-QDQNMLDEAIGSYQNAIELDSKYIDAYIQLGNAYLDKPMFDQALETYK 1758

Query: 339  KAL------PLARDEAELSHI-YSLRDAAIAQMKVCERYNIKKKVSPRSQNITKNEKLAI 391
            K L      P+A +   L +   ++ D A+      E++N   +++P+ +    N  LA 
Sbjct: 1759 KILEIDPQKPVAYNNIGLVYFDQNMNDEAL------EQFNKALEINPKYELSLYNSGLAY 1812

Query: 392  KQLRENNDIIIRPADKGGKTVVMDKADYTQKMTSILNSNDYEIIPGDPTKTIEESEKYGN 451
            +  R+N                      T+K     N    +++  +PT++   + K   
Sbjct: 1813 E--RKNQ---------------------TEKALECYN----KVLEINPTESRSLARKIAL 1845

Query: 452  LENESGQKHAASDFTKAFADLDEAEKVDPNVADSYYQR-GQIYCLFGQYEE--ALRNLDK 508
            L+ ++   +   DF K   D     K  P+   +  ++  Q +  + Q E+  ++  L K
Sbjct: 1846 LK-KNNSSNTGFDFLKDLQD-----KFGPSYKSTAEEKFNQAFHYYMQMEDDKSIECLKK 1899

Query: 509  TIALNPNFHVARAQRHFVWT 528
             I ++PN++ A     FV++
Sbjct: 1900 AIEIDPNYYAAYEMLGFVYS 1919



 Score = 51.2 bits (121), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 107/507 (21%), Positives = 212/507 (41%), Gaps = 116/507 (22%)

Query: 84   CTEEIESTSSNHTKALARLLRATVYIFTSQSTKAIEDLTQLVEDTSVDP------KIKVN 137
            C ++      N+ +A  +L    +Y       +AI +  +++E   ++P      K  +N
Sbjct: 827  CLQKALELDPNYYEAYDKL--GLIYKEKKMFDQAIVNFKKVLE---INPHCLDIIKTVMN 881

Query: 138  AHIKRAVVHLHAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKT 197
             ++ R ++      D  KAF   DE     P   D+YY+   +Y     +EE++ N  K 
Sbjct: 882  IYLDRKMI------DEAKAF--YDEV----PKNLDTYYEFADVYKSQNMFEESVTNYKKV 929

Query: 198  IALNPNFHVARAQRHFVVHKMIVPGDRERVEQSLKEFRNFVDTHSNVVEACTLFAQVLVD 257
            + L+PN        H ++  + +  ++   E++L+ ++N ++  S    A      V   
Sbjct: 930  LELDPN----DIDAHILLGSLYL--NKPDYEKALECYQNILNIDSKQAVAYNNMGLVYFR 983

Query: 258  QEDFDGAEEYFNRSIRVDPENASLYVHRAMLMLQARGNVDEAIKLIEKAISIDKSCMFAY 317
            Q   D A EYFN+++ V+P+   L ++ + L+ + +   D+A++L  + ++I+ +     
Sbjct: 984  QNIDDQALEYFNKALEVNPK-YELSIYNSGLVYEKKNQKDKALELYNQVLAINPT---EK 1039

Query: 318  ETLGTIEV--------------------------QRGRLEEAVKCFNKALPL------AR 345
            +TL  +E+                           + + EE++ C+ KAL L      A 
Sbjct: 1040 KTLARMEILKKKEQEQEQKLETAKDYLDQGFKYYNQMKDEESINCYKKALELDLNYFQAY 1099

Query: 346  DEAELSHIYSLR-DAAIAQMKVCERYNIKKKVSPRSQNITKN------EKLAIKQLRENN 398
            ++  L H  + + D A+      E Y    +++P+  +  K       +K  IK+ +E  
Sbjct: 1100 EKLGLLHKTNKKFDEAV------ENYKKAIEINPKCFSAMKAVMNLYLDKKMIKEAQEFC 1153

Query: 399  DIIIRPAD---KGGKTV----VMDKA-----------------------DYTQKMTSILN 428
            + + +  +   + G+T     ++D A                        Y  K+   L 
Sbjct: 1154 EFVPKCTEAYYELGRTYEEQNMLDDAIVNYKKAIQLDPSHINSYIYLGNSYLDKLQFDLA 1213

Query: 429  SNDYE-IIPGDPTKTIEESEKYGNLENESGQKHAASDFTKAFADLDEAEKVDPNVADSYY 487
             + Y+ II  DP K +  +   G + N+ G   AA ++ K   D      VDP+   + +
Sbjct: 1214 LDSYKKIIEIDPKKAVAYN-NVGVVYNKQGLYDAALEYYKKALD------VDPHYELALF 1266

Query: 488  QRGQIYCLFGQYEEALRNLDKTIALNP 514
              G +Y   G+ ++AL    KT+ +NP
Sbjct: 1267 NSGLVYEKKGEQDKALEFFYKTLEINP 1293



 Score = 48.5 bits (114), Expect = 0.008,   Method: Compositional matrix adjust.
 Identities = 105/495 (21%), Positives = 205/495 (41%), Gaps = 69/495 (13%)

Query: 61   ELDLLSKAKRAFEH--EDYLTAIRHCTEEIESTSSNHTKALARLLRATVYI--------F 110
            +L LL K  + F+   E+Y  AI     EI     +  KA+  L      I        F
Sbjct: 1101 KLGLLHKTNKKFDEAVENYKKAI-----EINPKCFSAMKAVMNLYLDKKMIKEAQEFCEF 1155

Query: 111  TSQSTKAIEDLTQLVEDTSV--DPKIKVNAHIKRAVVHLHAASDFTKAFAD-------LD 161
              + T+A  +L +  E+ ++  D  +     I+    H+++      ++ D       LD
Sbjct: 1156 VPKCTEAYYELGRTYEEQNMLDDAIVNYKKAIQLDPSHINSYIYLGNSYLDKLQFDLALD 1215

Query: 162  EAEKV---DPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQRHFVVHKM 218
              +K+   DP  A +Y   G +Y   G Y+ AL    K + ++P++ +A      V  K 
Sbjct: 1216 SYKKIIEIDPKKAVAYNNVGVVYNKQGLYDAALEYYKKALDVDPHYELALFNSGLVYEK- 1274

Query: 219  IVPGDRERVEQSLKEFRNFVDTHS------NVVEACTLFAQVLVDQEDFDGAEEYFNRSI 272
               G++++   +L+ F   ++ +       N ++      Q   D ++F   ++ F    
Sbjct: 1275 --KGEQDK---ALEFFYKTLEINPTEKKSLNRIKVIQQNKQTSKDDKEFSLFKDLFKNDK 1329

Query: 273  RVDPENASLYVHRAMLMLQARGNVDEAIKLIEKAISIDKSCMFAYETLGTIEVQRGRLEE 332
            +     A  Y +  ++  Q + N D+AI+ ++KA+ +D +   AY+ LG +   +   +E
Sbjct: 1330 KKVLSTADDYYYEGLVYYQQQ-NDDKAIECLKKALELDPNFYEAYDKLGLVYKVKKMFDE 1388

Query: 333  AVKCFNKALPLARDEAELSHIYSLRDAAIAQMKVCERYNIKKKVSP------------RS 380
            ++  + KAL L  +    S + ++ +  + +  + E     ++V              + 
Sbjct: 1389 SIIHYKKALEL--NPKFYSAMETVMNMYLDKKMIKEAKEFSEQVPKNLDTYYKLAKVYQD 1446

Query: 381  QNITKNEKLAIKQLRENNDIIIRPADKGGKTVVMDKADYTQKMTSILNSNDYEIIPGDPT 440
            QN+     +  K++ E +   I    + G    +DK  Y Q M         +II  D T
Sbjct: 1447 QNMLDESIVYYKKVLEQDSKYINAYIQLG-NAYLDKPLYDQAMECYQ-----KIIEIDST 1500

Query: 441  KTIEESEKYGNLENESGQKHAASD-FTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQY 499
            K++     Y N+    G  +   +   +A    ++A ++DP    S Y  G +Y    Q 
Sbjct: 1501 KSV----AYNNI----GLIYLRQNMLDEALEQFNKAIEIDPKYVLSIYNSGLVYEKKQQK 1552

Query: 500  EEALRNLDKTIALNP 514
            ++AL   +K + +NP
Sbjct: 1553 DKALECYNKALEINP 1567



 Score = 48.1 bits (113), Expect = 0.013,   Method: Compositional matrix adjust.
 Identities = 32/156 (20%), Positives = 78/156 (50%), Gaps = 11/156 (7%)

Query: 188  EEALRNLDKTIALNPNFHVARAQRHFVVHKMIVPGDRERVEQSLKEFRNFVDTHSNVVEA 247
            ++++  L K I ++PN++ A     FV  K      +++ +++++ ++  +  +   +E 
Sbjct: 1891 DKSIECLKKAIEIDPNYYAAYEMLGFVYSK------KKKFDEAIEFYQKGIKVNPKGMEC 1944

Query: 248  CTLFAQVLVDQEDFDGAEEYFNRSIRVDPENASLYVHRAMLMLQARGNVDEAIKLIEKAI 307
                 ++  D+   + A+E+FN+     P+    Y   A +  + +   +EAI   +KAI
Sbjct: 1945 IRSLVKIYQDKNMENEAKEFFNQI----PKYLETYYELATIYSECKM-TEEAIDYFQKAI 1999

Query: 308  SIDKSCMFAYETLGTIEVQRGRLEEAVKCFNKALPL 343
             +D   + AY  LG + + +   ++A++C+ K + +
Sbjct: 2000 ELDPLYINAYIELGNLYLGKAEYDQALECYQKIIQI 2035



 Score = 43.1 bits (100), Expect = 0.34,   Method: Compositional matrix adjust.
 Identities = 59/258 (22%), Positives = 112/258 (43%), Gaps = 42/258 (16%)

Query: 45   LSNGVELTNGDTNESHELDLLSKAKRAFEH--EDYLTAIRHCTEEIESTSSNHTKALARL 102
            L   +E+    +    +L L+ +    FE   E Y  AI H    ++  S+  T  + + 
Sbjct: 2180 LKKAIEIDPKYSEAYDKLGLVYEENEQFEEAIECYKKAIEHKPNNLDCISALMTIYINQK 2239

Query: 103  LR---ATVYIFTSQSTKAIEDLTQLVEDTS-VDPKIKVNAHIKRAVVHLHAASDFTKAFA 158
            +       Y   SQS     +L ++ ED S VD  I  ++H K+A+              
Sbjct: 2240 MTDEAKEFYNSVSQSADIYYELGRVYEDKSMVDEAI--SSH-KKAI-------------- 2282

Query: 159  DLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQRHFVVHKM 218
                  ++DP   +SY Q G IY     YE+A+    K + + PN  +A      + +  
Sbjct: 2283 ------ELDPKYVNSYIQLGNIYSEKASYEQAIEYFQKILEIEPNNEIAYNNIGLIYY-- 2334

Query: 219  IVPGDRERVEQSLKEFRNFVDTHSNVVEACTLFAQVLV--DQEDFDGAEEYFNRSIRVDP 276
                D+ + +Q+L+++   ++ +       +L+   LV   ++ ++ A E++N+ + ++P
Sbjct: 2335 ----DQGKYDQALEQYNKALEINPKY--ELSLYNSGLVYEKKDQYEKALEFYNKVLSINP 2388

Query: 277  -ENASLYVHRAMLMLQAR 293
             E  SL  +R  LM Q +
Sbjct: 2389 TERRSL--NRIKLMKQNK 2404



 Score = 40.4 bits (93), Expect = 2.5,   Method: Compositional matrix adjust.
 Identities = 36/126 (28%), Positives = 62/126 (49%), Gaps = 10/126 (7%)

Query: 249 TLFAQVLVDQED--FDGAEEYFNRSIRVDPENASLYVHRAMLMLQARGNVDEAIKLIEKA 306
           TLF + L  Q+    D A E + + + VD  N    ++   L+ Q++  +DE+++ + KA
Sbjct: 6   TLFNKALDFQKQNLIDEAIECYKKVLEVDYSNVEA-LYNLGLIYQSKKQLDESLEFLNKA 64

Query: 307 ISIDKSCMFAYETLGTIEVQRGRLEEAVKCFNKALPL----ARDEAELSHIY---SLRDA 359
           +  + + + AY       +Q+  +EEAV C  KAL +    A+    L   Y   +L D 
Sbjct: 65  VEKNPNYINAYICKAENYLQKKMIEEAVVCLQKALEIDPKSAKAHERLGFAYKKQNLTDK 124

Query: 360 AIAQMK 365
           AI  +K
Sbjct: 125 AIDCLK 130



 Score = 39.3 bits (90), Expect = 5.3,   Method: Compositional matrix adjust.
 Identities = 43/209 (20%), Positives = 92/209 (44%), Gaps = 16/209 (7%)

Query: 136  VNAHIKRAVVHLHAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLD 195
            +NA+I+    +L     + +A     +  ++D   + +Y   G IY      +EAL   +
Sbjct: 1468 INAYIQLGNAYLDKPL-YDQAMECYQKIIEIDSTKSVAYNNIGLIYLRQNMLDEALEQFN 1526

Query: 196  KTIALNPNFHVARAQRHFVVHKMIVPGDRERVEQSLKEFRNFVD---THSNVVEACTLFA 252
            K I ++P + ++      V  K      +++ +++L+ +   ++    H N     ++  
Sbjct: 1527 KAIEIDPKYVLSIYNSGLVYEK------KQQKDKALECYNKALEINPAHKNSYNRISVLK 1580

Query: 253  QVLVDQEDFDGAEEYFNRSIRVDPENASLYVHRAMLMLQARGNVDEAIKLIEKAISIDKS 312
            +     ++ D  E+       ++ + A  Y            N DE+IK + KAI +D +
Sbjct: 1581 KSGKQAQETDKEEQ-----QEINLQTAKDYYEEGY-KYYTELNDDESIKCLNKAIELDPN 1634

Query: 313  CMFAYETLGTIEVQRGRLEEAVKCFNKAL 341
               AY+ LG +  +  + EEA++ + KA+
Sbjct: 1635 YFEAYDKLGLVLKENRKYEEAIQSYKKAI 1663



 Score = 39.3 bits (90), Expect = 5.5,   Method: Compositional matrix adjust.
 Identities = 94/424 (22%), Positives = 169/424 (39%), Gaps = 63/424 (14%)

Query: 100  ARLLRATVYIFTSQSTKAIEDLTQLVEDTSVDPKIKVNAHIKRAVVHLHAASDFTKAFAD 159
            A +     Y+      +A+E   +++E   +DP+  V A+    +V+     +  +A   
Sbjct: 1736 AYIQLGNAYLDKPMFDQALETYKKILE---IDPQKPV-AYNNIGLVYFDQNMN-DEALEQ 1790

Query: 160  LDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQRHFVVHKMI 219
             ++A +++P    S Y  G  Y    Q E+AL   +K + +NP    + A++  ++ K  
Sbjct: 1791 FNKALEINPKYELSLYNSGLAYERKNQTEKALECYNKVLEINPTESRSLARKIALLKKNN 1850

Query: 220  VPGDRERVEQSLKEFRNFVDTHSNVVEACTLFAQVL---VDQEDFDGAEEYFNRSIRVDP 276
                     + L++   F  ++ +  E    F Q     +  ED D + E   ++I +DP
Sbjct: 1851 SSNTGFDFLKDLQD--KFGPSYKSTAE--EKFNQAFHYYMQMED-DKSIECLKKAIEIDP 1905

Query: 277  ENASLYVHRAML--MLQARGNVDEAIKLIEKAISIDKSCMFAYETLGTIEVQRGRLEEAV 334
               + Y    ML  +   +   DEAI+  +K I ++   M    +L  I   +    EA 
Sbjct: 1906 ---NYYAAYEMLGFVYSKKKKFDEAIEFYQKGIKVNPKGMECIRSLVKIYQDKNMENEAK 1962

Query: 335  KCFNKALPLARDEAELSHIYSLRDAAIAQMKVCERYNIKKKVSPRSQNITKNEKLAIKQL 394
            + FN+         EL+ IYS       + K+ E                     AI   
Sbjct: 1963 EFFNQIPKYLETYYELATIYS-------ECKMTEE--------------------AIDYF 1995

Query: 395  R---ENNDIIIRPADKGGKTVVMDKADYTQKMTSILNSNDYEIIPGDPTKTIEESEKYGN 451
            +   E + + I    + G  + + KA+Y Q +         +II  +P K +     Y N
Sbjct: 1996 QKAIELDPLYINAYIELG-NLYLGKAEYDQALECYQ-----KIIQINPQKAV----AYNN 2045

Query: 452  LENESGQKHAASDF-TKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTI 510
            +    G  H       KA    ++A ++DPN   SYY  G +Y     +++AL    K +
Sbjct: 2046 I----GLVHYKQKMDDKAIEYYNKALELDPNYDLSYYNSGLVYEQKKDFDKALECYKKVL 2101

Query: 511  ALNP 514
             +NP
Sbjct: 2102 QINP 2105


>gi|357412120|ref|YP_004923856.1| hypothetical protein Sfla_2912 [Streptomyces flavogriseus ATCC
           33331]
 gi|320009489|gb|ADW04339.1| Tetratricopeptide TPR_1 repeat-containing protein [Streptomyces
           flavogriseus ATCC 33331]
          Length = 1020

 Score = 70.1 bits (170), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 70/267 (26%), Positives = 121/267 (45%), Gaps = 15/267 (5%)

Query: 77  YLTAIRHCTEEIESTSSNHTKALARLLRATVYIFTSQSTKAIEDLTQLVEDTSVDPKIKV 136
           Y  ++  CT  +E    +   ALA   R   Y    +  +A  D  + +E   +D +   
Sbjct: 583 YEESVASCTRAVEI---DPGYALAFGSRGDAYRNLGRHDEAFADFGRAIE---IDRRYAW 636

Query: 137 NAHIKRAVVHLHAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDK 196
            A+  RA V+  A     +A AD D A ++DP    +   R Q++   G+YEEAL + D+
Sbjct: 637 -AYGSRARVY-EALERHEEALADYDRALEIDPLYEWAVGSRAQLFERMGRYEEALADYDR 694

Query: 197 TIALNPNFHVARAQRHFVVHKMIVPGDRERVEQSLKEFRNFVDTHSNVVEACTLFAQVLV 256
            + ++P +  ARA R  V   M       R E++L ++   +D       A    AQ+  
Sbjct: 695 AVEMDPQYAWARAGRAQVHEAM------GRHEEALADYDRALDIDPLYEWAVGSRAQLFE 748

Query: 257 DQEDFDGAEEYFNRSIRVDPENASLYVHRAMLMLQARGNVDEAIKLIEKAISIDKSCMFA 316
               ++ A   ++R++ +DPE A     RA +  +  G  +EA+    +A+ I     +A
Sbjct: 749 RMGRYEEALADYDRAVVIDPEYAWALGSRARVK-KDMGRPEEAVADYSRAVEILPDYAWA 807

Query: 317 YETLGTIEVQRGRLEEAVKCFNKALPL 343
           ++    +    GR +EA+  F +AL L
Sbjct: 808 FQGRAQVYAGMGRHDEALADFARALEL 834



 Score = 61.2 bits (147), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 48/189 (25%), Positives = 89/189 (47%), Gaps = 7/189 (3%)

Query: 153 FTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQRH 212
           + +A AD D A ++DP  A +   R Q++   G++EEAL + D+ + ++P +  A   R 
Sbjct: 685 YEEALADYDRAVEMDPQYAWARAGRAQVHEAMGRHEEALADYDRALDIDPLYEWAVGSRA 744

Query: 213 FVVHKMIVPGDRERVEQSLKEFRNFVDTHSNVVEACTLFAQVLVDQEDFDGAEEYFNRSI 272
            +  +M       R E++L ++   V        A    A+V  D    + A   ++R++
Sbjct: 745 QLFERM------GRYEEALADYDRAVVIDPEYAWALGSRARVKKDMGRPEEAVADYSRAV 798

Query: 273 RVDPENASLYVHRAMLMLQARGNVDEAIKLIEKAISIDKSCMFAYETLGTIEVQRGRLEE 332
            + P+ A  +  RA +     G  DEA+    +A+ +     +A    G +  + GR E+
Sbjct: 799 EILPDYAWAFQGRAQVY-AGMGRHDEALADFARALELRPGYGWALGNRGELYEKLGRRED 857

Query: 333 AVKCFNKAL 341
           AV  F +A+
Sbjct: 858 AVADFTRAI 866



 Score = 59.7 bits (143), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 50/194 (25%), Positives = 92/194 (47%), Gaps = 7/194 (3%)

Query: 155 KAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQRHFV 214
           +AFAD   A ++D   A +Y  R ++Y    ++EEAL + D+ + ++P +  A   R  +
Sbjct: 619 EAFADFGRAIEIDRRYAWAYGSRARVYEALERHEEALADYDRALEIDPLYEWAVGSRAQL 678

Query: 215 VHKMIVPGDRERVEQSLKEFRNFVDTHSNVVEACTLFAQVLVDQEDFDGAEEYFNRSIRV 274
             +M       R E++L ++   V+       A    AQV       + A   ++R++ +
Sbjct: 679 FERM------GRYEEALADYDRAVEMDPQYAWARAGRAQVHEAMGRHEEALADYDRALDI 732

Query: 275 DPENASLYVHRAMLMLQARGNVDEAIKLIEKAISIDKSCMFAYETLGTIEVQRGRLEEAV 334
           DP        RA L  +  G  +EA+   ++A+ ID    +A  +   ++   GR EEAV
Sbjct: 733 DPLYEWAVGSRAQL-FERMGRYEEALADYDRAVVIDPEYAWALGSRARVKKDMGRPEEAV 791

Query: 335 KCFNKALPLARDEA 348
             +++A+ +  D A
Sbjct: 792 ADYSRAVEILPDYA 805



 Score = 56.6 bits (135), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 85/423 (20%), Positives = 173/423 (40%), Gaps = 63/423 (14%)

Query: 121 LTQLVEDTSVDPKIKVNAHIKRAVVHLHAASDFTKAFADLDEAEKVDPNVADSYYQRGQI 180
           LT L+  + +D   +  A+  RA  + H   D   A AD + A  + P+ A  +   G+ 
Sbjct: 518 LTLLLNASELDASGRALAYTVRAEEYRHV-GDAGSALADCEAAVALAPDAARPHAGLGET 576

Query: 181 YCLFGQYEEALRNLDKTIALNPNFHVARAQRHFVVHKM---------------------I 219
           Y + G+YEE++ +  + + ++P + +A   R      +                      
Sbjct: 577 YRVLGRYEESVASCTRAVEIDPGYALAFGSRGDAYRNLGRHDEAFADFGRAIEIDRRYAW 636

Query: 220 VPGDRERVEQSLKEFRNFVDTHSNVVEACTLF-------AQVLVDQEDFDGAEEYFNRSI 272
             G R RV ++L+     +  +   +E   L+       AQ+      ++ A   ++R++
Sbjct: 637 AYGSRARVYEALERHEEALADYDRALEIDPLYEWAVGSRAQLFERMGRYEEALADYDRAV 696

Query: 273 RVDPENASLYVHRAMLMLQARGNVDEAIKLIEKAISIDKSCMFAYETLGTIEVQRGRLEE 332
            +DP+ A     RA +  +A G  +EA+   ++A+ ID    +A  +   +  + GR EE
Sbjct: 697 EMDPQYAWARAGRAQVH-EAMGRHEEALADYDRALDIDPLYEWAVGSRAQLFERMGRYEE 755

Query: 333 AVKCFNKALPLARDEAELSHIYSLRDAAIAQMKVCERYNIKKKVSPRSQNITKNEKLAIK 392
           A+  +++A+ +     +  + ++L            R  +KK +  R +    +   A++
Sbjct: 756 ALADYDRAVVI-----DPEYAWAL----------GSRARVKKDMG-RPEEAVADYSRAVE 799

Query: 393 QLRENNDIIIRPADKGGKTVVMDKADYTQKMTSILNSNDYEIIPGDPTKTIEESEKYGNL 452
            L +        A +G   V      + + +     +   E+ PG         E Y  L
Sbjct: 800 ILPDYA-----WAFQGRAQVYAGMGRHDEALADFARA--LELRPGYGWALGNRGELYEKL 852

Query: 453 ENESGQKHAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIAL 512
                ++ A +DFT+A        ++DP        R + Y   G++E+AL +  +T+ +
Sbjct: 853 GR---REDAVADFTRAI-------EIDPTSDWVLGARARTYLCMGRHEDALADCARTVEI 902

Query: 513 NPN 515
           +P 
Sbjct: 903 DPR 905



 Score = 45.1 bits (105), Expect = 0.10,   Method: Compositional matrix adjust.
 Identities = 21/57 (36%), Positives = 34/57 (59%)

Query: 467 KAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQR 523
           +A AD D A ++DP    +   R Q++   G+YEEAL + D+ + ++P +  ARA R
Sbjct: 653 EALADYDRALEIDPLYEWAVGSRAQLFERMGRYEEALADYDRAVEMDPQYAWARAGR 709



 Score = 44.3 bits (103), Expect = 0.16,   Method: Compositional matrix adjust.
 Identities = 51/234 (21%), Positives = 85/234 (36%), Gaps = 35/234 (14%)

Query: 294 GNVDEAIKLIEKAISIDKSCMFAYETLGTIEVQRGRLEEAVKCFNKALPLARDEAELSHI 353
           G  +E++    +A+ ID     A+ + G      GR +EA   F +A+ + R        
Sbjct: 581 GRYEESVASCTRAVEIDPGYALAFGSRGDAYRNLGRHDEAFADFGRAIEIDR-------- 632

Query: 354 YSLRDAAIAQMKVCERYNIKKKVSPRSQNITKNEKLAIKQLRENNDIIIRPADKGGKTVV 413
                          RY        R     +  + A+       +I     D   +  V
Sbjct: 633 ---------------RYAWAYGSRARVYEALERHEEALADYDRALEI-----DPLYEWAV 672

Query: 414 MDKADYTQKMTSILNSNDYEIIPGDPTKTIEESEKYGNLENESGQKH-AASDFTKAFADL 472
             +A   ++M        YE    D  + +E   +Y        Q H A     +A AD 
Sbjct: 673 GSRAQLFERM------GRYEEALADYDRAVEMDPQYAWARAGRAQVHEAMGRHEEALADY 726

Query: 473 DEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQRHFV 526
           D A  +DP    +   R Q++   G+YEEAL + D+ + ++P +  A   R  V
Sbjct: 727 DRALDIDPLYEWAVGSRAQLFERMGRYEEALADYDRAVVIDPEYAWALGSRARV 780


>gi|145504450|ref|XP_001438197.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
 gi|124405358|emb|CAK70800.1| unnamed protein product [Paramecium tetraurelia]
          Length = 728

 Score = 70.1 bits (170), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 69/274 (25%), Positives = 134/274 (48%), Gaps = 19/274 (6%)

Query: 83  HCTEEIESTSSNHTK-ALARLLRATVYIFTSQ-STKAIEDLTQLVEDTSVDPKIKVNAHI 140
           H  EEI        K A A  LR  +  F  +   KA++DL Q +     +P + V++  
Sbjct: 3   HAQEEINKALKLDPKYAEAYQLRGRLIHFKKEEKLKALDDLNQAIFH---NPSL-VSSFY 58

Query: 141 KRAVVHLHAASDFTK------AFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNL 194
            R +     A+ + K      A  D D+A K++P+ A +Y ++G +  + G+ +EAL   
Sbjct: 59  HRGISKTDVATVYQKNQMLDKALEDCDQAIKLNPDYALAYSKKGSLMKIKGRLDEALDLY 118

Query: 195 DKTIALNPNFHVARAQRHFVVHKMIVPGDRERVEQSLKEFRNFVDTHSNVVEACTLFAQV 254
            K I L+ N   A       +H+ ++  +  ++E++LK++   ++ + N   A      +
Sbjct: 119 SKAIGLDKNCSNA------FLHRALLFKEIRQLEKALKDYNQAIEINQNNPNAYFNRGVL 172

Query: 255 LVDQEDFDGAEEYFNRSIRVDPENASLYVHRAMLMLQARGNVDEAIKLIEKAISIDKSCM 314
           L +  +++ A + ++R+I ++P NAS+Y++R  L L +    + A+K  +KAI I+    
Sbjct: 173 LKEIGEYEQALQDYDRAIELNPTNASIYLNRGAL-LSSMNQKERALKDYDKAIQINPEYS 231

Query: 315 FAYETLGTIEVQRGRLEEAVKCFNKALPLARDEA 348
            AY     +     ++ +AVK  N  + + + +A
Sbjct: 232 NAYLNRALLLCDMDQIGKAVKDCNSIIKINKQDA 265



 Score = 54.3 bits (129), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 49/202 (24%), Positives = 94/202 (46%), Gaps = 9/202 (4%)

Query: 137 NAHIKRAVVHLHAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDK 196
           NA + RA++         KA  D ++A +++ N  ++Y+ RG +    G+YE+AL++ D+
Sbjct: 130 NAFLHRALL-FKEIRQLEKALKDYNQAIEINQNNPNAYFNRGVLLKEIGEYEQALQDYDR 188

Query: 197 TIALNPNFHVARAQRHFVVHKMIVPGDRERVEQSLKEFRNFVDTHSNVVEACTLFAQVLV 256
            I LNP        R  ++  M       + E++LK++   +  +     A    A +L 
Sbjct: 189 AIELNPTNASIYLNRGALLSSM------NQKERALKDYDKAIQINPEYSNAYLNRALLLC 242

Query: 257 DQEDFDGAEEYFNRSIRVDPENASLYVHRAMLMLQARGNVDEAIKLIEKAISIDKSCMFA 316
           D +    A +  N  I+++ ++A+ Y +R  L  Q      +A+    + I I+     A
Sbjct: 243 DMDQIGKAVKDCNSIIKINKQDANAYFNRGFLFDQL-DQRQQALDDYTQTIEINPKDSRA 301

Query: 317 YETLGTIEVQRGRLEEAVK-CF 337
           +   G +  +    E+A+K CF
Sbjct: 302 FINRGLLYWRMQEKEKAMKDCF 323



 Score = 53.9 bits (128), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 84/390 (21%), Positives = 165/390 (42%), Gaps = 80/390 (20%)

Query: 159 DLDEAEKVDPNVADSYYQRGQIYCLFGQYEE--ALRNLDKTIALNPNFHVARAQRHFVVH 216
           ++++A K+DP  A++Y  RG++   F + E+  AL +L++ I  NP+   +        H
Sbjct: 7   EINKALKLDPKYAEAYQLRGRL-IHFKKEEKLKALDDLNQAIFHNPSLVSS------FYH 59

Query: 217 KMIVPGDRERVEQSLKEFRNFVDTHSNVVEACTLFAQVLVDQEDFDGAEEYFNRSIRVDP 276
           + I   D                            A V    +  D A E  +++I+++P
Sbjct: 60  RGISKTD---------------------------VATVYQKNQMLDKALEDCDQAIKLNP 92

Query: 277 ENASLYVHRAMLMLQARGNVDEAIKLIEKAISIDKSCMFAYETLGTIEVQRGRLEEAVKC 336
           + A  Y  +  LM + +G +DEA+ L  KAI +DK+C  A+     +  +  +LE+A+K 
Sbjct: 93  DYALAYSKKGSLM-KIKGRLDEALDLYSKAIGLDKNCSNAFLHRALLFKEIRQLEKALKD 151

Query: 337 FNKALPLARDEAELSHIYSLRDAAIAQM----KVCERYNIKKKVSPRSQNITKNEKLAIK 392
           +N+A+ + ++     + Y  R   + ++    +  + Y+   +++P + +I  N      
Sbjct: 152 YNQAIEINQNNP---NAYFNRGVLLKEIGEYEQALQDYDRAIELNPTNASIYLN------ 202

Query: 393 QLRENNDIIIRPADKGGKTVVMDKADYTQKMTSILNSNDYEIIPGDPTKTIEESEKYGN- 451
                         +G     M++ +   K        DY+       K I+ + +Y N 
Sbjct: 203 --------------RGALLSSMNQKERALK--------DYD-------KAIQINPEYSNA 233

Query: 452 LENESGQKHAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIA 511
             N +          KA  D +   K++   A++Y+ RG ++    Q ++AL +  +TI 
Sbjct: 234 YLNRALLLCDMDQIGKAVKDCNSIIKINKQDANAYFNRGFLFDQLDQRQQALDDYTQTIE 293

Query: 512 LNPNFHVARAQRHFVWTSTLAELMAFSDEF 541
           +NP    A   R  ++     +  A  D F
Sbjct: 294 INPKDSRAFINRGLLYWRMQEKEKAMKDCF 323


>gi|428214933|ref|YP_007088077.1| Flp pilus assembly protein TadD [Oscillatoria acuminata PCC 6304]
 gi|428003314|gb|AFY84157.1| Flp pilus assembly protein TadD [Oscillatoria acuminata PCC 6304]
          Length = 348

 Score = 70.1 bits (170), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 57/218 (26%), Positives = 101/218 (46%), Gaps = 31/218 (14%)

Query: 155 KAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNP-------NFHVA 207
           +A A   +A  +DPN A +Y   G  Y    Q+EEA+   ++ + LNP       N  VA
Sbjct: 73  EAIAQYRQALALDPNNASAYNNLGNAYTDRQQHEEAIAAYEQALRLNPDQGQTYFNLGVA 132

Query: 208 -----RAQRHFVVHKMIV---PGDRE-------------RVEQSLKEFRNFVDTHSNVVE 246
                R       ++  V   P D E             ++++++  +R  +  ++N  E
Sbjct: 133 LTAVRRGDEAIAAYRRAVALDPNDAEAQVKIANLLVRQNKLDEAVTAYRTAIGLNANDAE 192

Query: 247 ACTLFAQVLVDQEDFDGAEEYFNRSIRVDPENASLYVHRAM-LMLQARGNVDEAIKLIEK 305
           A       L  Q+  D A   + +++ ++P  A   VH  + +ML+ + N++EA    E+
Sbjct: 193 AHLNLGLALARQDKVDEAIAAYRQALNINPNLAE--VHNNLGVMLRRQNNLEEATAAYER 250

Query: 306 AISIDKSCMFAYETLGTIEVQRGRLEEAVKCFNKALPL 343
           AI+I  +   AY  L T+  ++G L+EA+  + +AL L
Sbjct: 251 AIAISPNLATAYNGLATVYREQGNLDEAIATYRRALAL 288



 Score = 56.6 bits (135), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 52/211 (24%), Positives = 98/211 (46%), Gaps = 14/211 (6%)

Query: 145 VHLHAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNF 204
           V L A     +A A    A  +DPN A++  +   +     + +EA+      I LN N 
Sbjct: 131 VALTAVRRGDEAIAAYRRAVALDPNDAEAQVKIANLLVRQNKLDEAVTAYRTAIGLNAN- 189

Query: 205 HVARAQRHFVVHKMIVPGDRERVEQSLKEFRNFVDTHSNVVEACTLFAQVLVDQEDFDGA 264
               A+ H  +   +   D+  V++++  +R  ++ + N+ E       +L  Q + + A
Sbjct: 190 ---DAEAHLNLGLALARQDK--VDEAIAAYRQALNINPNLAEVHNNLGVMLRRQNNLEEA 244

Query: 265 EEYFNRSIRVDPENASLYVHRAMLMLQARGNVDEAIKLIEKAISI-DKSC------MFAY 317
              + R+I + P  A+ Y   A +  + +GN+DEAI    +A+++ D+          AY
Sbjct: 245 TAAYERAIAISPNLATAYNGLATVYRE-QGNLDEAIATYRRALALPDRPANPASAHTLAY 303

Query: 318 ETLGTIEVQRGRLEEAVKCFNKALPLARDEA 348
             LG    Q+G + EA++ F +A+ L+ + A
Sbjct: 304 NGLGLTLKQQGNIAEAIEQFQRAIELSPNYA 334



 Score = 42.0 bits (97), Expect = 0.76,   Method: Compositional matrix adjust.
 Identities = 64/299 (21%), Positives = 131/299 (43%), Gaps = 31/299 (10%)

Query: 224 RERVEQSLKEFRNFVDTHSNVVEACTLFAQVLVDQEDFDGAEEYFNRSIRVDPENASLYV 283
           +++VE+++ ++R  +    N   A         D++  + A   + +++R++P+    Y 
Sbjct: 68  QDKVEEAIAQYRQALALDPNNASAYNNLGNAYTDRQQHEEAIAAYEQALRLNPDQGQTYF 127

Query: 284 HRAMLMLQARGNVDEAIKLIEKAISIDKSCMFAYETLGTIEVQRGRLEEAVKCFNKALPL 343
           +  + +   R   DEAI    +A+++D +   A   +  + V++ +L+EAV  +  A+ L
Sbjct: 128 NLGVALTAVRRG-DEAIAAYRRAVALDPNDAEAQVKIANLLVRQNKLDEAVTAYRTAIGL 186

Query: 344 ARDEAELSHIYSLRDAAIAQMKVCERYNIKKKVSPRSQNITKNEKLAIKQLRENNDIIIR 403
             ++AE +H+ +L  A   Q KV E       ++   Q +  N  LA  ++  N  +++R
Sbjct: 187 NANDAE-AHL-NLGLALARQDKVDE------AIAAYRQALNINPNLA--EVHNNLGVMLR 236

Query: 404 PADKGGKTVVMDKADYTQKMTSILNSNDYEIIPGDPTKTIEESEKYGNLENESGQKHAAS 463
             +       +++A    +    ++ N      G  T   E+    GNL+       A +
Sbjct: 237 RQNN------LEEATAAYERAIAISPNLATAYNGLATVYREQ----GNLD------EAIA 280

Query: 464 DFTKAFADLDEAEKVDPNVADSYYQRGQIYCL--FGQYEEALRNLDKTIALNPNFHVAR 520
            + +A A  D     +P  A +    G    L   G   EA+    + I L+PN+  A+
Sbjct: 281 TYRRALALPDR--PANPASAHTLAYNGLGLTLKQQGNIAEAIEQFQRAIELSPNYAPAQ 337


>gi|254412945|ref|ZP_05026717.1| Tetratricopeptide repeat family [Coleofasciculus chthonoplastes PCC
           7420]
 gi|196180109|gb|EDX75101.1| Tetratricopeptide repeat family [Coleofasciculus chthonoplastes PCC
           7420]
          Length = 863

 Score = 70.1 bits (170), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 80/360 (22%), Positives = 154/360 (42%), Gaps = 38/360 (10%)

Query: 172 DSYYQRGQIYCL--FGQYEEALRNLDKTIALNPNFHVARAQRHFVVHKMIVPGDRERVEQ 229
           + Y   G+ Y L   G  +EA+ N DK + L PN + A + R   +       D    ++
Sbjct: 494 EGYAYLGKGYALHKLGNLKEAITNYDKGLELKPNNYEAWSNRGSALR------DLGHNKE 547

Query: 230 SLKEFRNFVDTHSNVVEACTLFAQVLVDQEDFDGAEEYFNRSIRVDPENASLYVHRAMLM 289
           ++      +   SN  +A       L++    + A   F+++I++ P+    + +R +++
Sbjct: 548 AIISHDKAIQIKSNYYQAWHNRGIALLNLRLLEEAIVSFDKAIQIKPDFHEAWNNRGVVL 607

Query: 290 LQARGNVDEAIKLIEKAISIDKSCMFAYETLGTIEVQRGRLEEAVKCFNKALPLARDEAE 349
           L  R  ++EAI   +KAI I      A+   G   +   RL+E++ CF+KAL L  D  E
Sbjct: 608 LNLRL-LEEAIVSFDKAIQIKPDFHEAWNNRGDALLNLRRLDESLACFDKALELKPDSWE 666

Query: 350 LSHIYSLRDAAIAQMKVCER----YNIKKKVSPRSQNITKNEKLAIKQLRE--------N 397
                + R   + ++K  ++    +N   ++ P       N  + +++L +        N
Sbjct: 667 ---ALNNRGTVLLKLKNLDKALTCFNKAIQIQPNLHQAWNNRSIVLRKLGQFKEAITSCN 723

Query: 398 NDIIIRPA---DKGGKTVVMDKADYTQKMTSILNSNDYEIIPGDPTKTIEESEKYGNLEN 454
             + I+P        K + +  + Y ++           II  D    I++ + + N   
Sbjct: 724 KALEIQPTYYEASYNKGIALAMSGYLKQA----------IISFDKATQIKQ-DFHDNWYI 772

Query: 455 ESGQKHAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNP 514
                +      +A    +EA K+ PN AD++Y +   Y L  + + A+ +L + I LNP
Sbjct: 773 RGLAFYDLGRLEEAITSFEEATKIKPNNADNFYSKACCYALQNKIDLAVESLKQAIKLNP 832



 Score = 38.9 bits (89), Expect = 6.3,   Method: Compositional matrix adjust.
 Identities = 50/256 (19%), Positives = 102/256 (39%), Gaps = 42/256 (16%)

Query: 268 FNRSIRVDPENASLYVHRAMLMLQARGNVDEAIKLIEKAISIDKSCMFAYETLGTIEVQR 327
           +++ + + P N   + +R    L+  G+  EAI   +KAI I  +   A+   G   +  
Sbjct: 518 YDKGLELKPNNYEAWSNRGS-ALRDLGHNKEAIISHDKAIQIKSNYYQAWHNRGIALLNL 576

Query: 328 GRLEEAVKCFNKALPLARDEAELSHIYSLRDAAIAQMKVCER----YNIKKKVSPRSQNI 383
             LEEA+  F+KA+ +  D  E    ++ R   +  +++ E     ++   ++ P     
Sbjct: 577 RLLEEAIVSFDKAIQIKPDFHE---AWNNRGVVLLNLRLLEEAIVSFDKAIQIKPDFHEA 633

Query: 384 TKNEKLAIKQLRENNDIIIRPADKGGKTVVMDKADYTQKMTSILNSNDYEIIPGDPTKTI 443
             N   A+  LR  ++ +             DKA               E+ P       
Sbjct: 634 WNNRGDALLNLRRLDESL----------ACFDKA--------------LELKP------- 662

Query: 444 EESEKYGNLENESGQKHAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEAL 503
              + +  L N         +  KA    ++A ++ PN+  ++  R  +    GQ++EA+
Sbjct: 663 ---DSWEALNNRGTVLLKLKNLDKALTCFNKAIQIQPNLHQAWNNRSIVLRKLGQFKEAI 719

Query: 504 RNLDKTIALNPNFHVA 519
            + +K + + P ++ A
Sbjct: 720 TSCNKALEIQPTYYEA 735


>gi|307154716|ref|YP_003890100.1| serine/threonine protein kinase [Cyanothece sp. PCC 7822]
 gi|306984944|gb|ADN16825.1| serine/threonine protein kinase [Cyanothece sp. PCC 7822]
          Length = 708

 Score = 70.1 bits (170), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 73/316 (23%), Positives = 134/316 (42%), Gaps = 33/316 (10%)

Query: 54  GDTNESHELDLLSKAKRAFEHEDYLTAIRHCTEEIESTSSNHTKALARLLRAT-----VY 108
           GDT     L  L + ++A +  D    I+  + +         + L R L A      V 
Sbjct: 373 GDT-----LQALKRYQQALDSYDEAIQIQPDSWQAWMGRGKVLEKLGRNLEAINSYEKVI 427

Query: 109 IFTSQSTKAIEDLTQL----------VEDTSVDPKIKVNAHIKRAVVH----LHAASDFT 154
           IF   S +A  +L +L          ++D  ++  +K+N   + A       L     + 
Sbjct: 428 IFKDNSWEAWSNLGELKVKLAQYSEAIKD--LEKSLKLNPDNEEAWYQKGWSLQNLKKYE 485

Query: 155 KAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQRHFV 214
            A    DE  KV+ + + ++YQ+G IY    +Y EA  N  K +   P+ + A   +   
Sbjct: 486 DAIKSYDETVKVNSSFSQAWYQKGNIYMNLEKYNEASENYAKAVQFQPDLYQAWYSQGIA 545

Query: 215 VHKMIVPGDRERVEQSLKEFRNFVDTHSNVVEACTLFAQVLVDQEDFDGAEEYFNRSIRV 274
           ++++       R E++LK F       S   EA    A  L   + +  A   +  +IR+
Sbjct: 546 LNRL------NRYEEALKTFEKATQVQSLSFEAWYQKAWTLHILKRYAEAVSAYTTAIRL 599

Query: 275 DPENASLYVHRAMLMLQARGNVDEAIKLIEKAISIDKSCMFAYETLGTIEVQRGRLEEAV 334
            P +   + ++A   L   G  +EA    ++ I++ K    A+++LG   ++  R +EA+
Sbjct: 600 RPRDQQAWYNKAN-SLYNFGEYEEATAAYKQVIALQKDYYPAWKSLGNSLLKLERYQEAI 658

Query: 335 KCFNKALPLARDEAEL 350
             +N+AL    D+ E+
Sbjct: 659 NAYNQALRYKPDQPEV 674



 Score = 50.8 bits (120), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 40/200 (20%), Positives = 89/200 (44%), Gaps = 7/200 (3%)

Query: 147 LHAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHV 206
           L+    +  A    D +  ++PN A+++  +G       +Y++AL + D+ I + P+   
Sbjct: 342 LYQLQRYEDALQAYDTSLNINPNNANAWQGKGDTLQALKRYQQALDSYDEAIQIQPDSWQ 401

Query: 207 ARAQRHFVVHKMIVPGDRERVEQSLKEFRNFVDTHSNVVEACTLFAQVLVDQEDFDGAEE 266
           A   R  V+ K+       R  +++  +   +    N  EA +   ++ V    +  A +
Sbjct: 402 AWMGRGKVLEKL------GRNLEAINSYEKVIIFKDNSWEAWSNLGELKVKLAQYSEAIK 455

Query: 267 YFNRSIRVDPENASLYVHRAMLMLQARGNVDEAIKLIEKAISIDKSCMFAYETLGTIEVQ 326
              +S++++P+N   +  +    LQ     ++AIK  ++ + ++ S   A+   G I + 
Sbjct: 456 DLEKSLKLNPDNEEAWYQKGW-SLQNLKKYEDAIKSYDETVKVNSSFSQAWYQKGNIYMN 514

Query: 327 RGRLEEAVKCFNKALPLARD 346
             +  EA + + KA+    D
Sbjct: 515 LEKYNEASENYAKAVQFQPD 534



 Score = 48.9 bits (115), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 80/369 (21%), Positives = 144/369 (39%), Gaps = 76/369 (20%)

Query: 169 NVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQRHFVVHKMIVPGDRERVE 228
           N A   Y +G       +YE+AL+  D ++ +NPN   A   +          GD     
Sbjct: 330 NNATKMYNKGNTLYQLQRYEDALQAYDTSLNINPNNANAWQGK----------GD---TL 376

Query: 229 QSLKEFRNFVDTHSNVVEACTLFAQVLVDQEDFDGAEEYFNRSIRVDPENASLYVHRAML 288
           Q+LK ++  +D+                           ++ +I++ P++   ++ R   
Sbjct: 377 QALKRYQQALDS---------------------------YDEAIQIQPDSWQAWMGRGK- 408

Query: 289 MLQARGNVDEAIKLIEKAISIDKSCMFAYETLGTIEVQRGRLEEAVKCFNKALPLARD-- 346
           +L+  G   EAI   EK I    +   A+  LG ++V+  +  EA+K   K+L L  D  
Sbjct: 409 VLEKLGRNLEAINSYEKVIIFKDNSWEAWSNLGELKVKLAQYSEAIKDLEKSLKLNPDNE 468

Query: 347 EAELSHIYSLRDAAIAQMKVCERYNIKK---KVSPRSQNITKNEKLAIKQLRENNDII-- 401
           EA     +SL+             N+KK    +    + +  N   +    ++ N  +  
Sbjct: 469 EAWYQKGWSLQ-------------NLKKYEDAIKSYDETVKVNSSFSQAWYQKGNIYMNL 515

Query: 402 --IRPADKGGKTVVMDKADYTQKMTS---ILNS-NDYEIIPGDPTKTIEESEKYGNLENE 455
                A +     V  + D  Q   S    LN  N YE    +  KT E++ +  +L  E
Sbjct: 516 EKYNEASENYAKAVQFQPDLYQAWYSQGIALNRLNRYE----EALKTFEKATQVQSLSFE 571

Query: 456 SGQK-----HAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTI 510
           +  +     H    + +A +    A ++ P    ++Y +      FG+YEEA     + I
Sbjct: 572 AWYQKAWTLHILKRYAEAVSAYTTAIRLRPRDQQAWYNKANSLYNFGEYEEATAAYKQVI 631

Query: 511 ALNPNFHVA 519
           AL  +++ A
Sbjct: 632 ALQKDYYPA 640



 Score = 42.0 bits (97), Expect = 0.87,   Method: Compositional matrix adjust.
 Identities = 17/61 (27%), Positives = 41/61 (67%)

Query: 463 SDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQ 522
           + +++A  DL+++ K++P+  +++YQ+G       +YE+A+++ D+T+ +N +F  A  Q
Sbjct: 448 AQYSEAIKDLEKSLKLNPDNEEAWYQKGWSLQNLKKYEDAIKSYDETVKVNSSFSQAWYQ 507

Query: 523 R 523
           +
Sbjct: 508 K 508


>gi|254412148|ref|ZP_05025923.1| Tetratricopeptide repeat family [Coleofasciculus chthonoplastes PCC
           7420]
 gi|196181114|gb|EDX76103.1| Tetratricopeptide repeat family [Coleofasciculus chthonoplastes PCC
           7420]
          Length = 427

 Score = 70.1 bits (170), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 59/245 (24%), Positives = 104/245 (42%), Gaps = 12/245 (4%)

Query: 99  LARLLRATVYIFTSQSTKAIEDLTQLVEDTSVDPKIKVNAHIKRAVVHLHAASDFTKAFA 158
           +AR L         Q   A E     +    +DP +   AH    ++ L+   +  +A +
Sbjct: 86  MARYLLGNALFQQGQIAAAAEQYQMAI---GLDPNM-AEAHYNLGLM-LYQQGNIEEAIS 140

Query: 159 DLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQRHFVVHKM 218
              +A  +DPN+A + Y  G      G  E AL    + + LNPN  VA+     ++ K 
Sbjct: 141 AYQQAIAIDPNLAAARYNLGLALEAVGDTEAALSEYTQAVRLNPNSAVAKYNLALLLAK- 199

Query: 219 IVPGDRERVEQSLKEFRNFVDTHSNVVEACTLFAQVLVDQEDFDGAEEYFNRSIRVDPEN 278
                + +V+ ++   R  +   S  V+A      +L  Q     A+  F R+ +++   
Sbjct: 200 -----QNQVDSAIAALRQALRNDSQFVQAHYQLGLLLAQQNQITEAKNSFLRATQINSRF 254

Query: 279 ASLYVHRAMLMLQARGNVDEAIKLIEKAISIDKSCMFAYETLGTIEVQRGRLEEAVKCFN 338
           A  +    ++ LQ +G+ +EAI+       ID   + AY  LG   +Q G  E+A+    
Sbjct: 255 APAHYRLGLIFLQ-QGDAEEAIRRFNWVTQIDPDNVDAYRQLGAALIQNGEYEQAIAALE 313

Query: 339 KALPL 343
           +A+ L
Sbjct: 314 RAISL 318



 Score = 57.0 bits (136), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 62/294 (21%), Positives = 128/294 (43%), Gaps = 38/294 (12%)

Query: 241 HSNVVEACTLFAQVLV--DQEDFDGAEEYFNRSIRVDPENASLYVHRAMLMLQ----ARG 294
           ++N +EA T F Q ++  ++ DF  AE  F ++++ DP     ++  A  +L      +G
Sbjct: 45  YTNDLEAATFFQQGVMRYNRSDFKAAELAFRKALQEDP-----FIPMARYLLGNALFQQG 99

Query: 295 NVDEAIKLIEKAISIDKSCMFAYETLGTIEVQRGRLEEAVKCFNKALPLARDEAELSHIY 354
            +  A +  + AI +D +   A+  LG +  Q+G +EEA+  + +A+ +  + A   +  
Sbjct: 100 QIAAAAEQYQMAIGLDPNMAEAHYNLGLMLYQQGNIEEAISAYQQAIAIDPNLAAARYNL 159

Query: 355 SLRDAAIAQMKVC-ERYNIKKKVSPRS-------------QNITKNEKLAIKQLRENNDI 400
            L   A+   +     Y    +++P S             QN   +   A++Q   N+  
Sbjct: 160 GLALEAVGDTEAALSEYTQAVRLNPNSAVAKYNLALLLAKQNQVDSAIAALRQALRNDSQ 219

Query: 401 IIRPADKGGKTVVMDKADYTQKMTSILNSNDYEIIPGDPTKTIEESEKYGNLENESGQKH 460
            ++   + G  ++  +   T+   S L +          ++      + G +  + G   
Sbjct: 220 FVQAHYQLG-LLLAQQNQITEAKNSFLRATQIN------SRFAPAHYRLGLIFLQQG--- 269

Query: 461 AASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNP 514
              D  +A    +   ++DP+  D+Y Q G      G+YE+A+  L++ I+L+P
Sbjct: 270 ---DAEEAIRRFNWVTQIDPDNVDAYRQLGAALIQNGEYEQAIAALERAISLDP 320



 Score = 50.8 bits (120), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 44/190 (23%), Positives = 85/190 (44%), Gaps = 7/190 (3%)

Query: 151 SDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQ 210
           SDF  A     +A + DP +  + Y  G      GQ   A       I L+PN     A+
Sbjct: 65  SDFKAAELAFRKALQEDPFIPMARYLLGNALFQQGQIAAAAEQYQMAIGLDPNM----AE 120

Query: 211 RHFVVHKMIVPGDRERVEQSLKEFRNFVDTHSNVVEACTLFAQVLVDQEDFDGAEEYFNR 270
            H+ +  M+    +  +E+++  ++  +    N+  A       L    D + A   + +
Sbjct: 121 AHYNLGLMLY--QQGNIEEAISAYQQAIAIDPNLAAARYNLGLALEAVGDTEAALSEYTQ 178

Query: 271 SIRVDPENASLYVHRAMLMLQARGNVDEAIKLIEKAISIDKSCMFAYETLGTIEVQRGRL 330
           ++R++P N+++  +   L+L  +  VD AI  + +A+  D   + A+  LG +  Q+ ++
Sbjct: 179 AVRLNP-NSAVAKYNLALLLAKQNQVDSAIAALRQALRNDSQFVQAHYQLGLLLAQQNQI 237

Query: 331 EEAVKCFNKA 340
            EA   F +A
Sbjct: 238 TEAKNSFLRA 247


>gi|416401989|ref|ZP_11687317.1| TPR domain protein [Crocosphaera watsonii WH 0003]
 gi|357261972|gb|EHJ11178.1| TPR domain protein [Crocosphaera watsonii WH 0003]
          Length = 547

 Score = 69.7 bits (169), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 94/409 (22%), Positives = 169/409 (41%), Gaps = 73/409 (17%)

Query: 139 HIKRAVVHLHAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTI 198
           H  R  + L    D   A  D +EA K+ P  AD+Y  RG  Y    Q E+A  + +K I
Sbjct: 94  HKYRGDIRLQL-KDTEGALQDYNEAIKLAPKQADAYVARGDYYTQMQQAEKAKADYNKAI 152

Query: 199 AL------NPNFHVARAQRHFVVHKMIVPGDRERVEQSLKEFRNFVDTHSNVVE--ACTL 250
            +      NP    +       +H      DR  V   +K ++  +  ++ V++     L
Sbjct: 153 TIYSESIENPTIKAS-----LFIHY----SDRAEVYSKIKNYQAAIADYTQVIDIGGPNL 203

Query: 251 F----AQVLVDQE--DFDGAEEYFNRSIRVDPENASLYVHRAMLMLQARGNVDEAIKLIE 304
           F    ++ ++ Q+  D++ A + F+++I + PE   +Y  RA++ L+ + N + A+  + 
Sbjct: 204 FLSYESRAVIYQQIKDYEAAIKDFSKAIAIQPEFIRIYGRRAIVYLEMK-NYEAALTDLS 262

Query: 305 KAISIDKS--------CMFAYETLGTIEVQRGRLEEAVKCFNKALPLARDEAELSHIYSL 356
           K I + K+         +FAY   G +  Q    + A++ F+  + L  +  E   +Y  
Sbjct: 263 KIIELGKNSQETEEFVVVFAYLQRGKLYQQAKNYQGAIEDFSSLIKLQPNSPESVEVYGR 322

Query: 357 RDAAIAQMKVCERYNIKKKVSPRSQNITKNEKLAIKQLRENNDIIIRPADKGGKT----V 412
           R  + AQ+                    KN   AI+    ++ I ++P +  G T    V
Sbjct: 323 RGLSYAQL--------------------KNYPAAIEDF--SSLIKLQPKNHQGYTYRCRV 360

Query: 413 VMDKADYTQKMTSILNSNDYEIIPGDPTKTIEESEKYGNLENESGQKHAASDFTKAFADL 472
            ++  DY Q M     +    I P +P      +  +  L+N          ++ A  D 
Sbjct: 361 YIELKDYNQAMKDC--NQAVAIAPNNPEVYFARAGVHSGLKN----------YSAAIKDA 408

Query: 473 DEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARA 521
           D+  ++ P+    Y+ RG +Y  F Q   +    D  +AL+ N   A A
Sbjct: 409 DKIIEIAPDFPVGYWVRGAMY--FAQNNPSKALSDYELALSKNHKFAPA 455



 Score = 50.4 bits (119), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 53/249 (21%), Positives = 107/249 (42%), Gaps = 16/249 (6%)

Query: 65  LSKAKRAFEHEDYLTAIRHCTE--EIESTSSNHTKALARLLRATVYIFTSQSTKAIEDLT 122
           L + K   + ++Y  AI   +   +++  S    +   R  R   Y        AIED +
Sbjct: 284 LQRGKLYQQAKNYQGAIEDFSSLIKLQPNSPESVEVYGR--RGLSYAQLKNYPAAIEDFS 341

Query: 123 QLVEDTSVDPKIKVNAHIKRAVVHLHAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYC 182
            L++   + PK     +  R  V++    D+ +A  D ++A  + PN  + Y+ R  ++ 
Sbjct: 342 SLIK---LQPK-NHQGYTYRCRVYIEL-KDYNQAMKDCNQAVAIAPNNPEVYFARAGVHS 396

Query: 183 LFGQYEEALRNLDKTIALNPNFHVARAQRHFVVHKMIVPGDRERVEQSLKEFRNFVDTHS 242
               Y  A+++ DK I + P+F V    R  +      P       ++L ++   +  + 
Sbjct: 397 GLKNYSAAIKDADKIIEIAPDFPVGYWVRGAMYFAQNNPS------KALSDYELALSKNH 450

Query: 243 NVVEACTLFAQVLVDQEDFDGAEEYFNRSIRVDPENASLYVHRAMLMLQARGNVDEAIKL 302
               A +  A V  +Q D   A E + +++ +  +     +  A+ + Q  G  ++A+ L
Sbjct: 451 KFAPAISSIAYVKYEQGDKQKAIELWQKALTIQDDLTGTKLALAVALYQ-EGQPEKALSL 509

Query: 303 IEKAISIDK 311
            ++AI ID+
Sbjct: 510 AKEAIKIDE 518


>gi|257062263|ref|YP_003142321.1| TPR repeat-containing protein [Cyanothece sp. PCC 8802]
 gi|256592523|gb|ACV03373.1| TPR repeat-containing protein [Cyanothece sp. PCC 8802]
          Length = 279

 Score = 69.7 bits (169), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 49/201 (24%), Positives = 95/201 (47%), Gaps = 7/201 (3%)

Query: 149 AASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVAR 208
           A  ++ +   D  E  +  P+ A++Y  RG  Y   G Y  A+++ +K+I LNPN++ A 
Sbjct: 37  AYPNYDQVIIDYTEIIQDFPDCAEAYSDRGCAYAAIGDYTHAIQDFNKSIKLNPNYYEAY 96

Query: 209 AQRHFVVHKMIVPGDRERVEQSLKEFRNFVDTHSNVVEACTLFAQVLVDQEDFDGAEEYF 268
             R FV       G +E+ E+++K+F   +       +A            +++ A E F
Sbjct: 97  RGRGFVY------GKQEKYEEAIKDFEKAIKIKPKYAQAFHGQGIAYTKLGNYEKALENF 150

Query: 269 NRSIRVDPENASLYVHRAMLMLQARGNVDEAIKLIEKAISIDKSCMFAYETLGTIEVQRG 328
            ++I+ +P+ A  +  R +  +Q      +A+   +KAI  + + + A    G    Q+G
Sbjct: 151 RKAIQNNPQYAEAFNGRGIAYIQME-KYRQALNDFDKAIKFNSNYIEAIYNKGIAYKQQG 209

Query: 329 RLEEAVKCFNKALPLARDEAE 349
             E+A++ F + + +  D  E
Sbjct: 210 NSEKAIEAFTQVIQIDSDYLE 230



 Score = 63.9 bits (154), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 56/215 (26%), Positives = 96/215 (44%), Gaps = 11/215 (5%)

Query: 117 AIEDLTQLVEDTSVDPKIKVN---AHIKRAVVHLHAASDFTKAFADLDEAEKVDPNVADS 173
           AI D T  ++D +   K+  N   A+  R  V+      + +A  D ++A K+ P  A +
Sbjct: 71  AIGDYTHAIQDFNKSIKLNPNYYEAYRGRGFVY-GKQEKYEEAIKDFEKAIKIKPKYAQA 129

Query: 174 YYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQRHFVVHKMIVPGDRERVEQSLKE 233
           ++ +G  Y   G YE+AL N  K I  NP +  A   R     +M      E+  Q+L +
Sbjct: 130 FHGQGIAYTKLGNYEKALENFRKAIQNNPQYAEAFNGRGIAYIQM------EKYRQALND 183

Query: 234 FRNFVDTHSNVVEACTLFAQVLVDQEDFDGAEEYFNRSIRVDPENASLYVHRAMLMLQAR 293
           F   +  +SN +EA          Q + + A E F + I++D +    Y+ R  +  +  
Sbjct: 184 FDKAIKFNSNYIEAIYNKGIAYKQQGNSEKAIEAFTQVIQIDSDYLEAYIERGYVYGEL- 242

Query: 294 GNVDEAIKLIEKAISIDKSCMFAYETLGTIEVQRG 328
           G   +AI+  EKA + +     AY  +   +  +G
Sbjct: 243 GKYKKAIEDCEKARNKNSKSQEAYLCIAKFKNIKG 277



 Score = 45.4 bits (106), Expect = 0.086,   Method: Compositional matrix adjust.
 Identities = 22/67 (32%), Positives = 37/67 (55%)

Query: 461 AASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVAR 520
           A  ++ +   D  E  +  P+ A++Y  RG  Y   G Y  A+++ +K+I LNPN++ A 
Sbjct: 37  AYPNYDQVIIDYTEIIQDFPDCAEAYSDRGCAYAAIGDYTHAIQDFNKSIKLNPNYYEAY 96

Query: 521 AQRHFVW 527
             R FV+
Sbjct: 97  RGRGFVY 103



 Score = 45.1 bits (105), Expect = 0.11,   Method: Compositional matrix adjust.
 Identities = 31/112 (27%), Positives = 57/112 (50%), Gaps = 3/112 (2%)

Query: 418 DYTQKMTSILNSNDYEIIPGDPTKTIEESEKYGNLENESGQKHAA-SDFTKAFADLDEAE 476
           D+ Q       + D  II  D T+ I++        ++ G  +AA  D+T A  D +++ 
Sbjct: 29  DFQQATPGAYPNYDQVII--DYTEIIQDFPDCAEAYSDRGCAYAAIGDYTHAIQDFNKSI 86

Query: 477 KVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQRHFVWT 528
           K++PN  ++Y  RG +Y    +YEEA+++ +K I + P +  A   +   +T
Sbjct: 87  KLNPNYYEAYRGRGFVYGKQEKYEEAIKDFEKAIKIKPKYAQAFHGQGIAYT 138



 Score = 40.4 bits (93), Expect = 2.6,   Method: Compositional matrix adjust.
 Identities = 22/75 (29%), Positives = 35/75 (46%)

Query: 465 FTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQRH 524
           + +A  D ++A K+ P  A +++ +G  Y   G YE+AL N  K I  NP +  A   R 
Sbjct: 109 YEEAIKDFEKAIKIKPKYAQAFHGQGIAYTKLGNYEKALENFRKAIQNNPQYAEAFNGRG 168

Query: 525 FVWTSTLAELMAFSD 539
             +        A +D
Sbjct: 169 IAYIQMEKYRQALND 183


>gi|126178012|ref|YP_001045977.1| TPR repeat-containing protein [Methanoculleus marisnigri JR1]
 gi|125860806|gb|ABN55995.1| TPR repeat-containing protein [Methanoculleus marisnigri JR1]
          Length = 562

 Score = 69.7 bits (169), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 85/398 (21%), Positives = 158/398 (39%), Gaps = 54/398 (13%)

Query: 131 DPKIKVNAHIKRAVVH----LHAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQ 186
           D  I+ N     A  H    L AA    +A    D+  ++DP     +  RGQ     G+
Sbjct: 32  DQAIRQNTGAGDAWYHKGLALAAARRHREALECFDQVVRIDPTCGRFWLARGQTLYDLGE 91

Query: 187 YEEALRNLDKTIALNPNFHVARAQRHFVVHKMIVPGDRERVEQSLKEFRNFVDTHSNVVE 246
             EA+ +  + + L P+   A   R   + K+ +        ++++ +   V    N ++
Sbjct: 92  CREAIGSCGQAVKLAPDSANAWFIRGHALRKIGLS------PEAIECYDRVVALEPNRID 145

Query: 247 ACTLFAQVLVDQEDFDGAEEYFNRSIRVDPENASLYVHRAML-MLQARGNVDEAIKLIEK 305
           A       L  +  ++ A E ++R + ++P+NA+ +  R  +  L +R   ++AI    +
Sbjct: 146 AWLARGTALAAERRYEAAIECYDRVVALEPKNANAWYARGTIETLLSR--YEDAIASYGQ 203

Query: 306 AISIDKSCMFAYETLGTIEVQRGRLEEAVKCFNKALPLARDEAELSHIYSLRDAAIAQMK 365
           A++ID +    +   G       R +EA+ CF++A+ L  D+AE    +  R  A+  ++
Sbjct: 204 AVAIDPNHAETWYNRGCALSALKRYDEAIGCFDRAIALRPDDAE---TWYNRGRALQNLE 260

Query: 366 VCER----YNIKKKVSPRSQNITKNEKLAIKQLRENNDIIIRPADKGGKTVVMDKADYTQ 421
             E     Y    +++P    I  ++   +K+L+   D+ +   D+  +   +D   + Q
Sbjct: 261 RYEEALDCYERAFRINPDYPGIWNHKATVLKKLKR-YDLSLACFDRALRVNAVDAEIWHQ 319

Query: 422 KMTSILNSNDYEIIPGDPTKTIEESEKYGNLENESGQKHAASDFTKAFADLDEAEKVDPN 481
           K         Y    GD  +                              L +A K+ P 
Sbjct: 320 KGLLYFTLKRY----GDAIEC-----------------------------LSQALKLQPG 346

Query: 482 VADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVA 519
             D+ Y RG+ Y   G  E A+      + LNP   VA
Sbjct: 347 HTDAEYYRGESYYALGNCEAAIDCYRAVVRLNPENAVA 384



 Score = 62.0 bits (149), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 83/461 (18%), Positives = 193/461 (41%), Gaps = 32/461 (6%)

Query: 64  LLSKAKRAFEHEDYLTAIRHCTEEIESTSSNHTKALARLLRATVYIFTSQSTKAIEDLTQ 123
            L++ +  ++  +   AI  C + ++    +   A A  +R         S +AIE   +
Sbjct: 79  WLARGQTLYDLGECREAIGSCGQAVKLAPDS---ANAWFIRGHALRKIGLSPEAIECYDR 135

Query: 124 LVEDTSVDPKIKVNAHIKRAVVHLHAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCL 183
           +V   +++P  +++A + R    L A   +  A    D    ++P  A+++Y RG I  L
Sbjct: 136 VV---ALEPN-RIDAWLARGTA-LAAERRYEAAIECYDRVVALEPKNANAWYARGTIETL 190

Query: 184 FGQYEEALRNLDKTIALNPNFHVARAQRHFVVHKMIVPGDRERVEQSLKEFRNFVDTHSN 243
             +YE+A+ +  + +A++PN       R   +  +      +R ++++  F   +    +
Sbjct: 191 LSRYEDAIASYGQAVAIDPNHAETWYNRGCALSAL------KRYDEAIGCFDRAIALRPD 244

Query: 244 VVEACTLFAQVLVDQEDFDGAEEYFNRSIRVDPENASLYVHRAMLMLQARGNVDEAIKLI 303
             E      + L + E ++ A + + R+ R++P+   ++ H+A ++ + +   D ++   
Sbjct: 245 DAETWYNRGRALQNLERYEEALDCYERAFRINPDYPGIWNHKATVLKKLK-RYDLSLACF 303

Query: 304 EKAISIDKSCMFAYETLGTIEVQRGRLEEAVKCFNKALPLARDEAELSHIYSLRDAAIAQ 363
           ++A+ ++      +   G +     R  +A++C ++AL L     +  +    R  +   
Sbjct: 304 DRALRVNAVDAEIWHQKGLLYFTLKRYGDAIECLSQALKLQPGHTDAEYY---RGESYYA 360

Query: 364 MKVCER----YNIKKKVSPRSQNITKNEKLAIKQLRENNDIII-----RPADKGGKTVVM 414
           +  CE     Y    +++P +     N   A+  L+   + ++        D   + V  
Sbjct: 361 LGNCEAAIDCYRAVVRLNPENAVAWNNCGNALYHLKHYEEALVCYERALEIDPENRRVWN 420

Query: 415 DKADYTQKMTSILNSNDYEIIPGDPTKTIEESEKYGNLENESGQKHAASDFTKAFADLDE 474
           +KA     + S+L+  D  ++  D  + +   E      N+         +++A      
Sbjct: 421 NKA----SVLSVLSHYDKALVCYD-QELLAHPENADAWYNKGVALFVLGRYSEAVTCYAH 475

Query: 475 AEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPN 515
             ++DP  A+ +   G    +  + EEAL   D  +A +P+
Sbjct: 476 VLEIDPARAEVWNTMGNALVILERSEEALECYDLALAASPD 516



 Score = 53.5 bits (127), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 57/273 (20%), Positives = 112/273 (41%), Gaps = 38/273 (13%)

Query: 245 VEACTLFAQVLVDQEDFDGAEEYFNRSIRVDPENASLYVHRAMLMLQARGNVDEAIKLIE 304
           VEA     +   +Q  +D A E ++++IR +      + H+ + +  AR +  EA++  +
Sbjct: 8   VEAWCKKGRAYAEQGQYDRAVECYDQAIRQNTGAGDAWYHKGLALAAARRH-REALECFD 66

Query: 305 KAISIDKSCMFAYETLGTIEVQRGRLEEAVKCFNKALPLARDEAELSHIYSLRDAAIAQM 364
           + + ID +C   +   G      G   EA+    +A+ LA D A   + + +R  A+   
Sbjct: 67  QVVRIDPTCGRFWLARGQTLYDLGECREAIGSCGQAVKLAPDSA---NAWFIRGHAL--- 120

Query: 365 KVCERYNIKKKVSPRSQNITKNEKLAIKQLRENNDIIIRPADKGGKTVVMDKAD-YTQKM 423
                    +K+    + I   +++          + + P          ++ D +  + 
Sbjct: 121 ---------RKIGLSPEAIECYDRV----------VALEP----------NRIDAWLARG 151

Query: 424 TSILNSNDYEIIPGDPTKTIEESEKYGNLENESGQ-KHAASDFTKAFADLDEAEKVDPNV 482
           T++     YE       + +    K  N     G  +   S +  A A   +A  +DPN 
Sbjct: 152 TALAAERRYEAAIECYDRVVALEPKNANAWYARGTIETLLSRYEDAIASYGQAVAIDPNH 211

Query: 483 ADSYYQRGQIYCLFGQYEEALRNLDKTIALNPN 515
           A+++Y RG       +Y+EA+   D+ IAL P+
Sbjct: 212 AETWYNRGCALSALKRYDEAIGCFDRAIALRPD 244



 Score = 52.4 bits (124), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 54/224 (24%), Positives = 95/224 (42%), Gaps = 13/224 (5%)

Query: 131 DPKIKVNAHIKRAVVHLHAASDFT-KAFAD----LDEAEKVDPNVADSYYQRGQIYCLFG 185
           D  ++VNA +   + H      FT K + D    L +A K+ P   D+ Y RG+ Y   G
Sbjct: 304 DRALRVNA-VDAEIWHQKGLLYFTLKRYGDAIECLSQALKLQPGHTDAEYYRGESYYALG 362

Query: 186 QYEEALRNLDKTIALNPNFHVARAQRHFVVHKMIVPGDRERVEQSLKEFRNFVDTHSNVV 245
             E A+      + LNP   VA       ++ +      +  E++L  +   ++      
Sbjct: 363 NCEAAIDCYRAVVRLNPENAVAWNNCGNALYHL------KHYEEALVCYERALEIDPENR 416

Query: 246 EACTLFAQVLVDQEDFDGAEEYFNRSIRVDPENASLYVHRAMLMLQARGNVDEAIKLIEK 305
                 A VL     +D A   +++ +   PENA  + ++ + +    G   EA+     
Sbjct: 417 RVWNNKASVLSVLSHYDKALVCYDQELLAHPENADAWYNKGVALF-VLGRYSEAVTCYAH 475

Query: 306 AISIDKSCMFAYETLGTIEVQRGRLEEAVKCFNKALPLARDEAE 349
            + ID +    + T+G   V   R EEA++C++ AL  + D+ E
Sbjct: 476 VLEIDPARAEVWNTMGNALVILERSEEALECYDLALAASPDDIE 519


>gi|34540729|ref|NP_905208.1| hypothetical protein PG0982 [Porphyromonas gingivalis W83]
 gi|34397043|gb|AAQ66107.1| TPR domain protein [Porphyromonas gingivalis W83]
          Length = 750

 Score = 69.7 bits (169), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 62/229 (27%), Positives = 97/229 (42%), Gaps = 39/229 (17%)

Query: 294 GNVDEAIKLIEKAISIDKSCMFAYETLGTIEVQRGRLEEAVKCFNKALPLARDEAELSHI 353
           G+ +EAIK   KAI +D   + AY   G    ++G  EEA+K F+KA+ L   + +  H 
Sbjct: 39  GSYEEAIKDYSKAIELDGKFIPAYYNRGVAYFKKGSYEEAIKDFSKAIEL---DDKFVHA 95

Query: 354 YSLRDAAIAQMKVCERYNIKKKVSPRSQNITKNEKLAIKQLRENNDIIIRPADKGGKTVV 413
           Y  R  A ++         KK +   SQ I  ++K  +                      
Sbjct: 96  YHGRGNAYSKKGW-----YKKAIKDYSQAIELDDKYIL---------------------- 128

Query: 414 MDKADYTQKMTSILNSNDYEIIPGDPTKTIEESEKYGNLENESGQKHAASD-FTKAFADL 472
                Y  +  +      YE    D +K IE  +KY    +  G  ++    + KA  D 
Sbjct: 129 ----GYNGRGVAYCEKGSYEEAIKDYSKAIELDDKYAPAYHGRGNAYSKKGWYKKAIKDY 184

Query: 473 DEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALN----PNFH 517
            +A ++D   A +YY RG  YC  G YEEA+++  + I L+    P +H
Sbjct: 185 SQAIELDGKFAHAYYGRGNAYCEKGSYEEAIKDYSQAIELDDKYAPAYH 233



 Score = 61.2 bits (147), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 55/220 (25%), Positives = 102/220 (46%), Gaps = 15/220 (6%)

Query: 171 ADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQRHFVVHKMIVPGDRERVEQS 230
           A +YY RG    + G YEEA+++  K I L+  F  A   R     K      +   E++
Sbjct: 25  AIAYYNRGVGCYIVGSYEEAIKDYSKAIELDGKFIPAYYNRGVAYFK------KGSYEEA 78

Query: 231 LKEFRNFVDTHSNVVEACTLFAQVLVDQEDFDGAEEYFNRSIRVDPENASLYVHRAMLML 290
           +K+F   ++     V A          +  +  A + ++++I +D +    Y  R +   
Sbjct: 79  IKDFSKAIELDDKFVHAYHGRGNAYSKKGWYKKAIKDYSQAIELDDKYILGYNGRGVAYC 138

Query: 291 QARGNVDEAIKLIEKAISIDKSCMFAYETLGTIEVQRGRLEEAVKCFNKALPLARDEAEL 350
           + +G+ +EAIK   KAI +D     AY   G    ++G  ++A+K +++A+ L   + + 
Sbjct: 139 E-KGSYEEAIKDYSKAIELDDKYAPAYHGRGNAYSKKGWYKKAIKDYSQAIEL---DGKF 194

Query: 351 SHIYSLRDAAIAQMKVCERYNIKKKVSPRSQNITKNEKLA 390
           +H Y  R  A      CE+ + ++ +   SQ I  ++K A
Sbjct: 195 AHAYYGRGNA-----YCEKGSYEEAIKDYSQAIELDDKYA 229



 Score = 57.8 bits (138), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 46/199 (23%), Positives = 89/199 (44%), Gaps = 7/199 (3%)

Query: 145 VHLHAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNF 204
           V  +    + +A  D  +A ++D     +YY RG  Y   G YEEA+++  K I L+  F
Sbjct: 33  VGCYIVGSYEEAIKDYSKAIELDGKFIPAYYNRGVAYFKKGSYEEAIKDFSKAIELDDKF 92

Query: 205 HVARAQRHFVVHKMIVPGDRERVEQSLKEFRNFVDTHSNVVEACTLFAQVLVDQEDFDGA 264
             A   R     K      +   ++++K++   ++     +           ++  ++ A
Sbjct: 93  VHAYHGRGNAYSK------KGWYKKAIKDYSQAIELDDKYILGYNGRGVAYCEKGSYEEA 146

Query: 265 EEYFNRSIRVDPENASLYVHRAMLMLQARGNVDEAIKLIEKAISIDKSCMFAYETLGTIE 324
            + ++++I +D + A  Y  R       +G   +AIK   +AI +D     AY   G   
Sbjct: 147 IKDYSKAIELDDKYAPAYHGRGN-AYSKKGWYKKAIKDYSQAIELDGKFAHAYYGRGNAY 205

Query: 325 VQRGRLEEAVKCFNKALPL 343
            ++G  EEA+K +++A+ L
Sbjct: 206 CEKGSYEEAIKDYSQAIEL 224



 Score = 55.8 bits (133), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 55/240 (22%), Positives = 101/240 (42%), Gaps = 12/240 (5%)

Query: 104 RATVYIFTSQSTKAIEDLTQLVEDTSVDPKIKVNAHIKRAVVHLHAASDFTKAFADLDEA 163
           R   Y       +AI+D ++ +E   +D K  V+A+  R   +      + KA  D  +A
Sbjct: 65  RGVAYFKKGSYEEAIKDFSKAIE---LDDKF-VHAYHGRGNAYSKKGW-YKKAIKDYSQA 119

Query: 164 EKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQRHFVVHKMIVPGD 223
            ++D      Y  RG  YC  G YEEA+++  K I L+  +  A   R     K      
Sbjct: 120 IELDDKYILGYNGRGVAYCEKGSYEEAIKDYSKAIELDDKYAPAYHGRGNAYSK------ 173

Query: 224 RERVEQSLKEFRNFVDTHSNVVEACTLFAQVLVDQEDFDGAEEYFNRSIRVDPENASLYV 283
           +   ++++K++   ++       A         ++  ++ A + ++++I +D + A  Y 
Sbjct: 174 KGWYKKAIKDYSQAIELDGKFAHAYYGRGNAYCEKGSYEEAIKDYSQAIELDDKYAPAYH 233

Query: 284 HRAMLMLQARGNVDEAIKLIEKAISIDKSCMFAYETLGTIEVQRGRLEEAVKCFNKALPL 343
            R       +G   +AIK   +AI +D   +  Y   G    + G  E++   FN  L L
Sbjct: 234 GRGN-AYSKKGWYKKAIKDYSQAIELDDKYILGYNGRGVAYYEIGDFEKSQADFNTVLYL 292



 Score = 54.7 bits (130), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 57/257 (22%), Positives = 113/257 (43%), Gaps = 36/257 (14%)

Query: 268 FNRSIRVDPENASLYVHRAMLMLQARGNVDEAIKLIEKAISIDKSCMFAYETLGTIEVQR 327
           ++++I +D +    Y +R +   + +G+ +EAIK   KAI +D   + AY   G    ++
Sbjct: 48  YSKAIELDGKFIPAYYNRGVAYFK-KGSYEEAIKDFSKAIELDDKFVHAYHGRGNAYSKK 106

Query: 328 GRLEEAVKCFNKALPLARDEAELSHIYSLRDAAIAQMKVCERYNIKKKVSPRSQNITKNE 387
           G  ++A+K +++A+ L  D+  L   Y+ R  A      CE+ + ++ +   S+ I  ++
Sbjct: 107 GWYKKAIKDYSQAIEL-DDKYILG--YNGRGVA-----YCEKGSYEEAIKDYSKAIELDD 158

Query: 388 KLAIKQLRENNDIIIRPADKGGKTVVMDKADYTQKMTSILNSNDYEIIPGDPTKTIEESE 447
           K A             PA  G       K  Y + +              D ++ IE   
Sbjct: 159 KYA-------------PAYHGRGNAYSKKGWYKKAIK-------------DYSQAIELDG 192

Query: 448 KYGNLENESGQKHA-ASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNL 506
           K+ +     G  +     + +A  D  +A ++D   A +Y+ RG  Y   G Y++A+++ 
Sbjct: 193 KFAHAYYGRGNAYCEKGSYEEAIKDYSQAIELDDKYAPAYHGRGNAYSKKGWYKKAIKDY 252

Query: 507 DKTIALNPNFHVARAQR 523
            + I L+  + +    R
Sbjct: 253 SQAIELDDKYILGYNGR 269


>gi|428299394|ref|YP_007137700.1| hypothetical protein Cal6303_2758 [Calothrix sp. PCC 6303]
 gi|428235938|gb|AFZ01728.1| Tetratricopeptide TPR_1 repeat-containing protein [Calothrix sp.
           PCC 6303]
          Length = 1787

 Score = 69.7 bits (169), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 95/426 (22%), Positives = 184/426 (43%), Gaps = 28/426 (6%)

Query: 118 IED-LTQLVEDTSVDPKIKVNAHIKRAVVHLHAASDFTKAFADLDEAEKVDPNVADSYYQ 176
           IED LT L +  +++PK+    +++ +++     S   +A A+ ++A ++ PN   ++  
Sbjct: 548 IEDSLTPLNQAINLNPKLYQAYYLRGSILSFQGKS--KEALAEFNKATELKPNFTQAWRI 605

Query: 177 RGQIYCLFGQYEEALRNLDKTIALNPNFH---VARAQRHFVVH--KMIVPGDRERVEQSL 231
           +  +     +Y EAL+ +DK I +        V + +  F  +  ++ +  + ER +++L
Sbjct: 606 KSSLLFNLKKYPEALKAIDKAIEIQSKSKSDPVGKIKSSFTFYPLRIAILIELERYQEAL 665

Query: 232 KEFRNFVDTHSNVVEACTLFAQVLVDQEDFDGAEEYFNRSIRVDPENASLYVHRAMLMLQ 291
            E + F+DT S  +    L   +    +D++ A +   ++I + P N + Y  R    L+
Sbjct: 666 DESKKFIDTSSYAI-GYILRGAIYWKLKDYEKAFDDIKKAIELKPNNPNYYFIRGSSYLE 724

Query: 292 ARGNVDEAIKLIEKAISIDKSCMFAYETLGTIEVQRGRLEEAVKCFNKALPLARDEAELS 351
            + N  +A    +KAI++  S    Y        +    E A+  + KA+ L   E +  
Sbjct: 725 RKEN-QKAFADFKKAITLQPSNAELYINRAIAYQEVKDTERAMADYKKAIEL---EPKNP 780

Query: 352 HIYSLRDAAIAQMKVCER----YNIKKKVSPRSQNITKNEKLAIKQLRENNDIIIRPAD- 406
             Y  R  A  ++K  ER    Y    ++ P +         A + L EN   +   AD 
Sbjct: 781 ERYITRAEAYQELKDTERAMADYKKAIELDPNNPERYITRARAYQDLEENEKAM---ADY 837

Query: 407 -KGGKTVVMDKADYTQKMTSILNSNDYEIIPGDPTKTIEESEKYGNLENESGQKHAASDF 465
            K  +    D  +Y  +  +      Y+    D  K IE   K  +L N     +   D 
Sbjct: 838 KKAIQIEPHDPWNYIWRGYAYQGMFRYQDALDDFNKAIEIDPKNPDLYNTRCSAYQEDDE 897

Query: 466 TKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYE---EALRNLDKTIAL---NPNFHVA 519
            KA +D  +A ++D +    Y  R ++Y     Y+   +   +L+K I +   NPN ++ 
Sbjct: 898 QKAISDCTKAIELDSDNPKRYLNRAEVYFKSKNYQLKSKGFADLNKAIEVDPKNPNLYMI 957

Query: 520 RAQRHF 525
           R++ + 
Sbjct: 958 RSRVYM 963



 Score = 63.5 bits (153), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 97/460 (21%), Positives = 190/460 (41%), Gaps = 60/460 (13%)

Query: 67   KAKRAFEHEDYLTAIRHCTEEIESTSSNHTKALARL--------LRATVYIFTSQSTKAI 118
            K+   F  + Y  A++   + IE  S + +  + ++        LR  + I   +  +A+
Sbjct: 606  KSSLLFNLKKYPEALKAIDKAIEIQSKSKSDPVGKIKSSFTFYPLRIAILIELERYQEAL 665

Query: 119  EDLTQLVEDTSVDPKIKVNAHIKRAVVHLHAASDFTKAFADLDEAEKVDPNVADSYYQRG 178
            ++  + ++ +S         +I R  ++     D+ KAF D+ +A ++ PN  + Y+ RG
Sbjct: 666  DESKKFIDTSSY-----AIGYILRGAIYWKL-KDYEKAFDDIKKAIELKPNNPNYYFIRG 719

Query: 179  QIYCLFGQYEEALRNLDKTIALNPNFHVARAQRHFVVHKMIVPGDRERVEQSLKEFRNFV 238
              Y    + ++A  +  K I L P      +     +++ I   + +  E+++ +++  +
Sbjct: 720  SSYLERKENQKAFADFKKAITLQP------SNAELYINRAIAYQEVKDTERAMADYKKAI 773

Query: 239  DTHSNVVEACTLFAQVLVDQEDFDGAEEYFNRSIRVDPENASLYVHRAMLMLQARGNVDE 298
            +      E     A+   + +D + A   + ++I +DP N   Y+ RA        N ++
Sbjct: 774  ELEPKNPERYITRAEAYQELKDTERAMADYKKAIELDPNNPERYITRARAYQDLEEN-EK 832

Query: 299  AIKLIEKAISIDKSCMFAYETLGTIEVQRGRLEEAVKCFNKALPLARDEAELSHIYSLRD 358
            A+   +KAI I+    + Y   G       R ++A+  FNKA+ +     +L   Y+ R 
Sbjct: 833  AMADYKKAIQIEPHDPWNYIWRGYAYQGMFRYQDALDDFNKAIEIDPKNPDL---YNTR- 888

Query: 359  AAIAQMKVCERY---NIKKKVSPRSQNITKNEKLAIKQLRENNDIIIRPADKGGKTVVMD 415
                    C  Y   + +K +S    + TK    AI+   +N    +  A+     V   
Sbjct: 889  --------CSAYQEDDEQKAIS----DCTK----AIELDSDNPKRYLNRAE-----VYFK 927

Query: 416  KADYTQKMTSILNSND-YEIIPGDPTKTIEESEKYGNLENESGQKHAASDFTKAFADLDE 474
              +Y  K     + N   E+ P +P   +  S  Y N            D+  A  D  +
Sbjct: 928  SKNYQLKSKGFADLNKAIEVDPKNPNLYMIRSRVYMNF----------FDYPNAINDATK 977

Query: 475  AEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNP 514
            A  + P+  D Y+ R   Y    +YE+AL + +K I + P
Sbjct: 978  AIDIIPSCFDCYFWRAFSYRQMKEYEKALVDYNKIIEIEP 1017



 Score = 59.7 bits (143), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 117/526 (22%), Positives = 203/526 (38%), Gaps = 87/526 (16%)

Query: 65   LSKAKRAFEHEDYLTAIRHCTEEIESTSSNHTKALARLLRATVYIFTSQSTKAIEDLTQL 124
            L +A+  +  +DY  A    T+ IE  S N  + L R   A  Y        A  D T+ 
Sbjct: 1092 LKRAEVYWTLKDYQNAFADYTKAIEVDSKNPERYLKR---AEAYWTLKDYQNAFADYTKA 1148

Query: 125  VEDTSVDPKIKVNAHIKRAVVHLHAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLF 184
            +E   VDPK     H+KRA  +     D+  AFAD  +A +VDP   + Y +R + Y   
Sbjct: 1149 IE---VDPK-NPELHLKRAEAYW-TLKDYQNAFADYTKAIEVDPKNPERYRKRAKAYLEV 1203

Query: 185  GQYEEALRNLDKTIAL---NPNFHVARAQRHFVVHKMIVPGDRERVEQSLKEFRNFVDTH 241
              Y + + +  K I +   NP ++      + +        +R  V   LK+++N +  +
Sbjct: 1204 KDYNKVITDYTKAINIISDNPTYYTDLKVLNNISDSPTYYIERGDVYSELKDYQNALADY 1263

Query: 242  SNVVE-------------ACTL--------------FAQVLVDQEDFDGAEEYFNRSIRV 274
               +E             A  +                +  ++ +D+  A     + I+ 
Sbjct: 1264 IKAIEIYDNLPALPNSQQAWLMHSTKKYKYEETRLKIVKTSLNYKDYQKAIVNLTKIIQQ 1323

Query: 275  DPENASLYVHRAMLMLQARGN------VDEAIKLIEKAISIDK---SCMFA--------- 316
            +P    LY HR    L+ + N      + +AI+++EK  +I      C F+         
Sbjct: 1324 NPNVFDLYFHRGSASLELKDNKNAIADLTKAIEIMEKEKNISSFAVKCTFSDLLCVKEWS 1383

Query: 317  -YETLGTIEVQRGRLEEAVKCFNKALPLARDEAELSHIYSLRDAAIAQM--KVCERYNIK 373
             Y   G     +    +A+K FNKA  + +        Y      + ++  K  E Y  K
Sbjct: 1384 LYVNRGLAYKNQQDYLKAIKDFNKAAEILKYNRSNQEEYKRVQKYLIELASKNPEPYLTK 1443

Query: 374  KKVSPRS---QNITKNEKLAIK---------QLRENNDIIIRPADKG----GKTVVMDKA 417
             + S RS   +N+  N   AI+           R N   +++   K      K +  D  
Sbjct: 1444 VEASQRSGDYKNMLANYTKAIEIAPQESEFYMGRANVYFLLKNYRKAFVDYNKAIAFDSE 1503

Query: 418  D---YTQKMTSILNSNDYEIIPGDPTKTIE----ESEKYGNLE-----NESGQKHAASDF 465
                Y ++  + L   D E    D  K IE       K+ ++      + +       ++
Sbjct: 1504 KSWYYIERAEAYLKVKDNEKAFVDYNKAIEIYTKNIAKFSSISSFYYIDRAKAYLKVKNY 1563

Query: 466  TKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIA 511
             KAFAD ++A  ++P+  ++Y  R + Y     YE+A  + +K IA
Sbjct: 1564 EKAFADYNKAIALEPDDDNNYIARAKAYLEIKDYEKAFADYNKAIA 1609



 Score = 58.2 bits (139), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 98/435 (22%), Positives = 179/435 (41%), Gaps = 65/435 (14%)

Query: 116  KAIEDLTQLVEDTSVDPKIKVNAHIKRAVVHLHAASD--FTKAFADLDEAEKVDPNVADS 173
            KAI D T+ +E  S +PK     ++ RA V+  + +    +K FADL++A +VDP   + 
Sbjct: 899  KAISDCTKAIELDSDNPK----RYLNRAEVYFKSKNYQLKSKGFADLNKAIEVDPKNPNL 954

Query: 174  YYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQRHFVVHKMIVPGDRERVEQSLKE 233
            Y  R ++Y  F  Y  A+ +  K I + P+       R F   +M      +  E++L +
Sbjct: 955  YMIRSRVYMNFFDYPNAINDATKAIDIIPSCFDCYFWRAFSYRQM------KEYEKALVD 1008

Query: 234  FRNFVDTHSNVVEACTLFAQVLVDQEDFDGAEEYFNRSIRVDPENASLYVHRAMLMLQAR 293
            +   ++       +  + A+  ++ +D+  A   + + I ++P N+  Y+ RA      +
Sbjct: 1009 YNKIIEIEPIDPYSYNVRAEFFLELKDYKKAFADYQKMIELEPNNSENYLERAEAYWTLK 1068

Query: 294  GNVDEAIKLIEKAISIDKSCMFAYETLGTIEVQRGRLEEAVKCFNKALPLARDEAELSHI 353
             +   A     KAI +D      Y     +       + A   + KA+ +     E    
Sbjct: 1069 -DYQNAFADYTKAIEVDSKNPERYLKRAEVYWTLKDYQNAFADYTKAIEVDSKNPER--- 1124

Query: 354  YSLRDAAIAQMKVCER----YNIKKKVSPRSQNITKNEKLAIKQLRENNDIIIRPADKGG 409
            Y  R  A   +K  +     Y    +V P++  +      A   L++  +          
Sbjct: 1125 YLKRAEAYWTLKDYQNAFADYTKAIEVDPKNPELHLKRAEAYWTLKDYQNAF-------- 1176

Query: 410  KTVVMDKADYTQKMTSILNSNDYEIIPGDPTKTIEESEKYGNLENESGQKHAASDFTKA- 468
                   ADYT+ +         E+ P +P +  + ++ Y  LE +   K   +D+TKA 
Sbjct: 1177 -------ADYTKAI---------EVDPKNPERYRKRAKAY--LEVKDYNK-VITDYTKAI 1217

Query: 469  ---------FADLDEAEKVDPNVADS---YYQRGQIYCLFGQYEEALRNLDKTIALNPNF 516
                     + DL    KV  N++DS   Y +RG +Y     Y+ AL +  K I +  N 
Sbjct: 1218 NIISDNPTYYTDL----KVLNNISDSPTYYIERGDVYSELKDYQNALADYIKAIEIYDNL 1273

Query: 517  -HVARAQRHFVWTST 530
              +  +Q+ ++  ST
Sbjct: 1274 PALPNSQQAWLMHST 1288



 Score = 40.4 bits (93), Expect = 2.4,   Method: Compositional matrix adjust.
 Identities = 60/296 (20%), Positives = 123/296 (41%), Gaps = 30/296 (10%)

Query: 64   LLSKAKRAFEHEDYLTAIRHCTEEIESTSSNHTKALARLLRATVYIFTSQSTKAIEDLTQ 123
            LL   ++AF   DY  AI   +E          K+   + RA  Y+    + KA  D  +
Sbjct: 1483 LLKNYRKAFV--DYNKAIAFDSE----------KSWYYIERAEAYLKVKDNEKAFVDYNK 1530

Query: 124  LVE----DTSVDPKIKVNAHIKRAVVHLHAASDFTKAFADLDEAEKVDPNVADSYYQRGQ 179
             +E    + +    I    +I RA  +L    ++ KAFAD ++A  ++P+  ++Y  R +
Sbjct: 1531 AIEIYTKNIAKFSSISSFYYIDRAKAYLKV-KNYEKAFADYNKAIALEPDDDNNYIARAK 1589

Query: 180  IYC-------LFGQYEEALRNLDKTIALNPNFHVARAQRHFVVHKMIVPGDRERVEQSLK 232
             Y         F  Y +A+ + +K IA+ P  +  + + +  + +     + +  E++  
Sbjct: 1590 AYLEIKDYEKAFADYNKAIADDNKAIAIQPEPYAIQLELYNYLARAEAYLEIKNYEKAFA 1649

Query: 233  EFR--NFVDTHSNVVEACTLF---AQVLVDQEDFDGAEEYFNRSIRVDPENASLYVHRAM 287
            ++   N    H       T +   A+  +  +D+  A +   + I + P N   Y  R +
Sbjct: 1650 DYNKANLEGNHFPYFIKITAYIKQAEAYLGIKDYQNAIDNHTKVINLQPNNPIFYNSRGL 1709

Query: 288  LMLQARGNVDEAIKLIEKAISIDKSCMFAYETLGTIEVQRGRLEEAVKCFNKALPL 343
               +++ N  ++I    KA+ +      +Y   G    +    ++A+    KA+ +
Sbjct: 1710 AYFRSQ-NYQQSILDYNKALELQPDYADSYYNRGLAYKELKDYQKAITDIQKAVQI 1764



 Score = 39.3 bits (90), Expect = 5.7,   Method: Compositional matrix adjust.
 Identities = 84/364 (23%), Positives = 144/364 (39%), Gaps = 86/364 (23%)

Query: 185  GQYEEALRNLDKTIALNPN---FHVARAQRHFVVHKMIVPGDRERVEQSLKEFRN-FVDT 240
            G Y+  L N  K I + P    F++ RA  +F+                LK +R  FVD 
Sbjct: 1451 GDYKNMLANYTKAIEIAPQESEFYMGRANVYFL----------------LKNYRKAFVD- 1493

Query: 241  HSNVVEACTLFAQVLVDQEDFDGAEEYFNRSIRVDPENASLYVHRAMLMLQARGN----- 295
                                       +N++I  D E +  Y+ RA   L+ + N     
Sbjct: 1494 ---------------------------YNKAIAFDSEKSWYYIERAEAYLKVKDNEKAFV 1526

Query: 296  -VDEAIKLIEKAISIDKS-CMFAYETLGTIEVQRGRLEEAVKCFNKALPLARDEAELSHI 353
              ++AI++  K I+   S   F Y       ++    E+A   +NKA+ L  D+    + 
Sbjct: 1527 DYNKAIEIYTKNIAKFSSISSFYYIDRAKAYLKVKNYEKAFADYNKAIALEPDD---DNN 1583

Query: 354  YSLRDAAIAQMKVCER----YNIKKKVSPRSQNIT-KNEKLAIKQLRENNDIIIRPADKG 408
            Y  R  A  ++K  E+    YN  K ++  ++ I  + E  AI QL   N +    A   
Sbjct: 1584 YIARAKAYLEIKDYEKAFADYN--KAIADDNKAIAIQPEPYAI-QLELYNYLARAEAYLE 1640

Query: 409  GKTVVMDKADYTQ------------KMTSILNSNDYEIIPGDPTKTIEESEKYGNLE--- 453
             K      ADY +            K+T+ +   +  +   D    I+   K  NL+   
Sbjct: 1641 IKNYEKAFADYNKANLEGNHFPYFIKITAYIKQAEAYLGIKDYQNAIDNHTKVINLQPNN 1700

Query: 454  ----NESGQKHAAS-DFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDK 508
                N  G  +  S ++ ++  D ++A ++ P+ ADSYY RG  Y     Y++A+ ++ K
Sbjct: 1701 PIFYNSRGLAYFRSQNYQQSILDYNKALELQPDYADSYYNRGLAYKELKDYQKAITDIQK 1760

Query: 509  TIAL 512
             + +
Sbjct: 1761 AVQI 1764



 Score = 38.9 bits (89), Expect = 8.0,   Method: Compositional matrix adjust.
 Identities = 34/164 (20%), Positives = 76/164 (46%), Gaps = 19/164 (11%)

Query: 40   LQPDGLSNGVELTNGDTNESHELDLLSKAKRAFEHEDYLTAIRHCTEEIESTSSNHTKAL 99
            +QP+  +  +EL N           L++A+   E ++Y  A     +   +   NH    
Sbjct: 1617 IQPEPYAIQLELYN----------YLARAEAYLEIKNYEKAFADYNKA--NLEGNH---F 1661

Query: 100  ARLLRATVYIFTSQSTKAIEDLTQLVEDTSVDPKIKVNAHI---KRAVVHLHAASDFTKA 156
               ++ T YI  +++   I+D    +++ +    ++ N  I    R + +  +  ++ ++
Sbjct: 1662 PYFIKITAYIKQAEAYLGIKDYQNAIDNHTKVINLQPNNPIFYNSRGLAYFRS-QNYQQS 1720

Query: 157  FADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIAL 200
              D ++A ++ P+ ADSYY RG  Y     Y++A+ ++ K + +
Sbjct: 1721 ILDYNKALELQPDYADSYYNRGLAYKELKDYQKAITDIQKAVQI 1764


>gi|414077915|ref|YP_006997233.1| hypothetical protein ANA_C12709 [Anabaena sp. 90]
 gi|413971331|gb|AFW95420.1| TPR repeat-containing protein [Anabaena sp. 90]
          Length = 460

 Score = 69.7 bits (169), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 57/232 (24%), Positives = 104/232 (44%), Gaps = 12/232 (5%)

Query: 117 AIEDLTQLVEDTSVDPKIKVNAHIKRAVVHLHAASDFTKAFADLDEAEKVDPNVADSYYQ 176
           AI+D TQ +   +++P     A+  R +   H   D   A  D  +A +++PN AD+YY 
Sbjct: 224 AIDDWTQAI---NINPNY-AKAYFNRGLARYHLG-DKQSAIDDWTQAIRINPNYADTYYS 278

Query: 177 RGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQRHFVVHKMIVPGDRERVEQSLKEFRN 236
           RG  +   G  + A+ +  + I +NPN+ +A   R     ++   GD+   + ++ ++  
Sbjct: 279 RGLAHSELGDNQSAIDDYTQAININPNYDLAYRNRGIARSEL---GDK---QGAIDDYSQ 332

Query: 237 FVDTHSNVVEACTLFAQVLVDQEDFDGAEEYFNRSIRVDPENASLYVHRAMLMLQARGNV 296
            ++ + N   A            D  GA   + ++I ++P +A  Y HR        G+ 
Sbjct: 333 AININPNYDLAYCNRGIARSKLGDKQGAINDYTQAININPNDADAYFHRGYNHYHL-GDN 391

Query: 297 DEAIKLIEKAISIDKSCMFAYETLGTIEVQRGRLEEAVKCFNKALPLARDEA 348
             AI    +AI I+ +   AY   G I  + G  + A+  + KA  + + E 
Sbjct: 392 QSAIDDFTQAIKINPNDADAYFNRGVIHSELGDKQGAIINYRKAADIYKKEG 443



 Score = 46.2 bits (108), Expect = 0.040,   Method: Compositional matrix adjust.
 Identities = 32/124 (25%), Positives = 53/124 (42%), Gaps = 2/124 (1%)

Query: 419 YTQKMTSILNSNDYEIIPGDPTKTIEESEKYGNLE-NESGQKHAASDFTKAFADLDEAEK 477
           Y        N  DY+    D T+ I  +  Y     N    ++   D   A  D  +A +
Sbjct: 208 YISLGNECFNKKDYKGAIDDWTQAININPNYAKAYFNRGLARYHLGDKQSAIDDWTQAIR 267

Query: 478 VDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQRHFVWTSTLAELMAF 537
           ++PN AD+YY RG  +   G  + A+ +  + I +NPN+ +A   R     S L +    
Sbjct: 268 INPNYADTYYSRGLAHSELGDNQSAIDDYTQAININPNYDLAYRNRGIA-RSELGDKQGA 326

Query: 538 SDEF 541
            D++
Sbjct: 327 IDDY 330



 Score = 45.4 bits (106), Expect = 0.083,   Method: Compositional matrix adjust.
 Identities = 70/299 (23%), Positives = 128/299 (42%), Gaps = 53/299 (17%)

Query: 215 VHKMIVPGDRERVEQSLKEFRNFVDTHSNVVEACTLFAQVLVDQEDFDGAEEYFNRSIRV 274
           + +++ PG      +SL        T S++ +  +L  +   +++D+ GA + + ++I +
Sbjct: 184 IDELLYPGGLRGYLESL--------TSSDIDKYISLGNECF-NKKDYKGAIDDWTQAINI 234

Query: 275 DPENASLYVHRAMLMLQARGNVDEAIKLIEKAISIDKSCMFAYETLGTIEVQRGRLEEAV 334
           +P  A  Y +R +      G+   AI    +AI I+ +    Y + G    + G  + A+
Sbjct: 235 NPNYAKAYFNRGLARYHL-GDKQSAIDDWTQAIRINPNYADTYYSRGLAHSELGDNQSAI 293

Query: 335 KCFNKALPLARDEAELSHIYSLRDAAIAQMKVCERYNIKKKVSPRSQ--NITKNEKLAIK 392
             + +A+ +       ++  + R+  IA+ ++ ++   +  +   SQ  NI  N  LA  
Sbjct: 294 DDYTQAINI-----NPNYDLAYRNRGIARSELGDK---QGAIDDYSQAININPNYDLAYC 345

Query: 393 QLRENNDIIIRP--ADKGGKTVVMDKADYTQKMTSILNSNDYEIIPGDPTKTIEESEKYG 450
                N  I R    DK G        DYTQ +          I P D          + 
Sbjct: 346 -----NRGIARSKLGDKQGAI-----NDYTQAIN---------INPNDADAYFHRGYNHY 386

Query: 451 NL-ENESGQKHAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDK 508
           +L +N+S    A  DFT+A        K++PN AD+Y+ RG I+   G  + A+ N  K
Sbjct: 387 HLGDNQS----AIDDFTQAI-------KINPNDADAYFNRGVIHSELGDKQGAIINYRK 434


>gi|189183138|ref|YP_001936923.1| TPR repeat-containing protein 03 [Orientia tsutsugamushi str.
           Ikeda]
 gi|189179909|dbj|BAG39689.1| TPR repeat-containing protein 03 [Orientia tsutsugamushi str.
           Ikeda]
          Length = 502

 Score = 69.7 bits (169), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 92/376 (24%), Positives = 158/376 (42%), Gaps = 26/376 (6%)

Query: 151 SDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQ 210
           + + +A  + D A K +PN A++YY +G      GQ ++A+ N D TI    N   A   
Sbjct: 56  NKYQEAIENFDLAIKYNPNCAEAYYNKGICLDKLGQLQKAIENFDLTIKYKSNCEEA--- 112

Query: 211 RHFVVHKMIVPGDRERVEQSLKEFRNFVDTHSNVVEACTLFAQVLVDQEDFDGAEEYFNR 270
               + K +  G   +++++++ F   +  + N   A       L     +  A E  N 
Sbjct: 113 ---YLSKGVSLGKLGQLQKAIENFDLAIKHNINYETAYLNKGICLYKLGQYHEAIECCNL 169

Query: 271 SIRVDPENASLYVHRAMLMLQARGNVDEAIKLIEKAISIDKSCMFAYETLGTIEVQRGRL 330
           +I+ +P N   Y H   + L   G   EAI+  + AI  +      Y   G    + G+ 
Sbjct: 170 AIKYEPYNPDAY-HSKGMCLDKLGQYHEAIENFDLAIKYEPYNPDTYNNKGVCVDKLGQH 228

Query: 331 EEAVKCFNKALPLARD--EAELSHIYSLRDAAIAQMK-VCERYNIKKKVSPRSQNITKNE 387
           +EA+K FN A+    +  EA L+    L    + Q K   E +++  K          N+
Sbjct: 229 QEAIKIFNLAIKYKPNCEEAYLNKGMCLYQ--LEQYKEAIENFDLAIKYKSNYVGAYLNK 286

Query: 388 KLAIKQLRENNDIIIRPADKGGKTVVMDKADYTQKMTSILNSNDYEIIPGDPTKTIEESE 447
              + +L ++ + I    D   K  + +   Y  K   +     Y+    +  +  + + 
Sbjct: 287 GACLSKLEQHQEAI-ENFDLAIKYELCNPDTYYNKGACLYELRQYQ----EAVENFDLAI 341

Query: 448 KYG-NLENESGQKHAA----SDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLF--GQYE 500
           KY  N E     K A       + +A    + A K +PN A++YY +G   CLF  GQ++
Sbjct: 342 KYNPNFEKAYLSKGACLYELRQYQEAIECCNLAIKYNPNDAEAYYNKGV--CLFKLGQHQ 399

Query: 501 EALRNLDKTIALNPNF 516
            A+ N D  I  NPN+
Sbjct: 400 AAVENYDLAIKYNPNY 415



 Score = 55.5 bits (132), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 42/160 (26%), Positives = 76/160 (47%), Gaps = 14/160 (8%)

Query: 129 SVDPKIKVNAHIKRAVVH----LHAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLF 184
           + D  IK N + ++A +     L+    + +A    + A K +PN A++YY +G   CLF
Sbjct: 336 NFDLAIKYNPNFEKAYLSKGACLYELRQYQEAIECCNLAIKYNPNDAEAYYNKGV--CLF 393

Query: 185 --GQYEEALRNLDKTIALNPNFHVARAQRHFVVHKMIVPGDRERVEQSLKEFRNFVDTHS 242
             GQ++ A+ N D  I  NPN+  A   +   + K+       + +++++ F   +  + 
Sbjct: 394 KLGQHQAAVENYDLAIKYNPNYVDAYYNKGLCLSKL------GQAQEAVENFNLAIKYNP 447

Query: 243 NVVEACTLFAQVLVDQEDFDGAEEYFNRSIRVDPENASLY 282
           N  EA       L +   +  A   F+ +I+ DP N +LY
Sbjct: 448 NDAEAYYNKGLCLYELRQYQAAIANFDLAIKYDPNNGTLY 487



 Score = 50.8 bits (120), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 78/376 (20%), Positives = 154/376 (40%), Gaps = 56/376 (14%)

Query: 170 VADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQRHFVVHKMIVPGDRERVEQ 229
           +A+ ++  G  +    +Y+EA+ N D  I  NPN   A   +   + K+       ++++
Sbjct: 41  LAEKHFYVGISFLKLNKYQEAIENFDLAIKYNPNCAEAYYNKGICLDKL------GQLQK 94

Query: 230 SLKEFRNFVDTHSNVVEACTLFAQVLVDQEDFDGAEEYFNRSIRVDPENASLYVHRAMLM 289
           +++ F   +   SN  EA       L        A E F+ +I+ +    + Y+++ + +
Sbjct: 95  AIENFDLTIKYKSNCEEAYLSKGVSLGKLGQLQKAIENFDLAIKHNINYETAYLNKGICL 154

Query: 290 LQARGNVDEAIKLIEKAISIDKSCMFAYETLGTIEVQRGRLEEAVKCFNKALPLARDEAE 349
            +  G   EAI+    AI  +     AY + G    + G+  EA++ F+ A+   + E  
Sbjct: 155 YKL-GQYHEAIECCNLAIKYEPYNPDAYHSKGMCLDKLGQYHEAIENFDLAI---KYEPY 210

Query: 350 LSHIYSLRDAAIAQM----KVCERYNIKKKVSPRSQNITKNEKLAIKQLRENNDIIIRPA 405
               Y+ +   + ++    +  + +N+  K  P  +    N+ + + QL +      + A
Sbjct: 211 NPDTYNNKGVCVDKLGQHQEAIKIFNLAIKYKPNCEEAYLNKGMCLYQLEQ-----YKEA 265

Query: 406 DKGGKTVVMDKADYTQKMTSILNSNDYEIIPGDPTKTIEESEKYGNLENESGQKHAASDF 465
            +     +  K++Y   + + LN        G     +E+ +                  
Sbjct: 266 IENFDLAIKYKSNY---VGAYLNK-------GACLSKLEQHQ------------------ 297

Query: 466 TKAFADLDEAEKVDPNVADSYYQRGQIYCLFG--QYEEALRNLDKTIALNPNFHVARAQR 523
            +A  + D A K +    D+YY +G   CL+   QY+EA+ N D  I  NPNF  A   +
Sbjct: 298 -EAIENFDLAIKYELCNPDTYYNKGA--CLYELRQYQEAVENFDLAIKYNPNFEKAYLSK 354

Query: 524 HFVWTSTLAELMAFSD 539
                + L EL  + +
Sbjct: 355 ----GACLYELRQYQE 366


>gi|425441210|ref|ZP_18821493.1| TPR repeat:TPR repeat [Microcystis aeruginosa PCC 9717]
 gi|389718158|emb|CCH97859.1| TPR repeat:TPR repeat [Microcystis aeruginosa PCC 9717]
          Length = 506

 Score = 69.7 bits (169), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 58/254 (22%), Positives = 111/254 (43%), Gaps = 19/254 (7%)

Query: 99  LARLLRATVYI---------FTSQST--KAIEDLTQLVEDTSVDPKIKVNAHIKRAVVHL 147
           L R +R  VY+         FT Q    K  E    L +  S+DP        K+ ++H 
Sbjct: 195 LEREIRRLVYLDGDLDTYQQFTPQQRQEKLAEIKAYLSDSPSLDPVQTSELWHKKGLIH- 253

Query: 148 HAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVA 207
               ++ +A A  D+A ++ P+  +++Y RG      G+ EEA+ + D+ +   P++H A
Sbjct: 254 QMGKEYEQAIASYDKALEIKPDYHEAWYNRGVALGNLGRLEEAIASYDQALEFKPDYHEA 313

Query: 208 RAQRHFVVHKMIVPGDRERVEQSLKEFRNFVDTHSNVVEACTLFAQVLVDQEDFDGAEEY 267
              R   +  +       R EQ++  +   ++   +  EA       L +   F+ A   
Sbjct: 314 WNNRGIALRNL------GRFEQAIASYDRALEFKPDKHEAWNNRGNALFNLGRFEQAIAS 367

Query: 268 FNRSIRVDPENASLYVHRAMLMLQARGNVDEAIKLIEKAISIDKSCMFAYETLGTIEVQR 327
           +++++   P+    + +R  + L   G + EAI   ++A+        A+   G      
Sbjct: 368 YDQALEFKPDYHEAWYNRG-IALGNLGRLAEAIASYDRALEFKPDFHEAWYNRGNALGNL 426

Query: 328 GRLEEAVKCFNKAL 341
           GRLE+A+  +++AL
Sbjct: 427 GRLEQAIASYDRAL 440



 Score = 41.6 bits (96), Expect = 1.2,   Method: Compositional matrix adjust.
 Identities = 23/86 (26%), Positives = 42/86 (48%), Gaps = 6/86 (6%)

Query: 438 DPTKTIEESEKYGNLENESGQKHAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFG 497
           DP +T E   K G +           ++ +A A  D+A ++ P+  +++Y RG      G
Sbjct: 238 DPVQTSELWHKKGLIH------QMGKEYEQAIASYDKALEIKPDYHEAWYNRGVALGNLG 291

Query: 498 QYEEALRNLDKTIALNPNFHVARAQR 523
           + EEA+ + D+ +   P++H A   R
Sbjct: 292 RLEEAIASYDQALEFKPDYHEAWNNR 317


>gi|374812493|ref|ZP_09716230.1| hypothetical protein TpriZ_01350 [Treponema primitia ZAS-1]
          Length = 343

 Score = 69.7 bits (169), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 73/291 (25%), Positives = 124/291 (42%), Gaps = 38/291 (13%)

Query: 254 VLVDQEDFDGAEEYFNRSIRVDPENASLYVHRAMLMLQARGNVDEAIKLIEKAISIDKSC 313
           +  DQ+++D A  Y+N++IR++P     Y +R       +G    A+    +AI +  + 
Sbjct: 38  LYADQKNYDSAIGYYNQAIRLNPNLPEAYNNRGS-AYAVKGEQVWALADFTEAIRLKPNY 96

Query: 314 MFAYETLGTIEVQRGRLEEAVKCFNKALPLARDEAELSHIYSLRDAAIAQMKVCERYNIK 373
            FAY   G + ++RG  E A+  F++A+ +   +   +  Y  R  A  Q    ER    
Sbjct: 97  TFAYNNRGLLHIERGDYERALSDFSQAILI---DPGYAKAYRNRGDAWVQKGEYER---- 149

Query: 374 KKVSPRSQNITKNEKLAIKQLRENNDIIIRPADKGGKTVVMDKA--DYTQKMTSILNSND 431
             +S   Q I  +   A+      N      A++G      DKA  DY Q +    N  +
Sbjct: 150 -AISDYDQAIRLSPSYAMAYGSRGNAY----ANRG----EYDKAAADYNQAIRINPNYAE 200

Query: 432 YEIIPG--------------DPTKTIEESEKYG-----NLENESGQKHAASDFTKAFADL 472
             I  G              D T+ ++ +  YG     +  N     +   ++ +A  D 
Sbjct: 201 AYINRGNIYYDIGYTNRGLEDYTRVLDINLSYGPDLAKSYANRGLAYNNMGEYRRALTDY 260

Query: 473 DEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQR 523
           +EA K+ PN+A  +  RG  Y   G+Y+ A+ +    I LNPN+ +A   R
Sbjct: 261 NEAIKLRPNLAVVFRHRGVSYTNLGEYDLAIEDFTHAIILNPNYALAYINR 311



 Score = 65.5 bits (158), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 84/387 (21%), Positives = 151/387 (39%), Gaps = 79/387 (20%)

Query: 134 IKVNAHIKRAVVHLHAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRN 193
           +  N +I R +++     ++  A    ++A +++PN+ ++Y  RG  Y + G+   AL +
Sbjct: 27  LSYNEYINRGILYADQ-KNYDSAIGYYNQAIRLNPNLPEAYNNRGSAYAVKGEQVWALAD 85

Query: 194 LDKTIALNPNFHVARAQRHFVVHKMIVPGDRERVEQSLKEFRNFVDTHSNVVEACTLFAQ 253
             + I L PN+  A   R  ++H  I  GD ER                           
Sbjct: 86  FTEAIRLKPNYTFAYNNRG-LLH--IERGDYER--------------------------- 115

Query: 254 VLVDQEDFDGAEEYFNRSIRVDPENASLYVHRAMLMLQARGNVDEAIKLIEKAISIDKSC 313
            L D          F+++I +DP  A  Y +R    +Q +G  + AI   ++AI +  S 
Sbjct: 116 ALSD----------FSQAILIDPGYAKAYRNRGDAWVQ-KGEYERAISDYDQAIRLSPSY 164

Query: 314 MFAYETLGTIEVQRGRLEEAVKCFNKALPLARDEAELSHIYSLRDAAIAQMKVCERYNIK 373
             AY + G     RG  ++A   +N+A+ +  + AE                   R NI 
Sbjct: 165 AMAYGSRGNAYANRGEYDKAAADYNQAIRINPNYAE---------------AYINRGNIY 209

Query: 374 KKVSPRSQNITKNEKLAIKQLRENNDIIIRPADKGGKTVVMDKADYTQKMTSILNSNDY- 432
             +   ++ +    ++    L    D+    A++G      +  +Y + +T      DY 
Sbjct: 210 YDIGYTNRGLEDYTRVLDINLSYGPDLAKSYANRG--LAYNNMGEYRRALT------DYN 261

Query: 433 EIIPGDPTKTI---EESEKYGNLENESGQKHAASDFTKAFADLDEAEKVDPNVADSYYQR 489
           E I   P   +        Y NL           ++  A  D   A  ++PN A +Y  R
Sbjct: 262 EAIKLRPNLAVVFRHRGVSYTNL----------GEYDLAIEDFTHAIILNPNYALAYINR 311

Query: 490 GQIYCLFGQYEEALRNLDKTIALNPNF 516
           G  Y   G Y++A  +  + + +NP +
Sbjct: 312 GNAYSQKGLYDQARIDYHQAVRINPKY 338



 Score = 60.1 bits (144), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 59/276 (21%), Positives = 112/276 (40%), Gaps = 50/276 (18%)

Query: 104 RATVYIFTSQSTKAIEDLTQLVEDTSVDPKIKVNAHIKRAVVHLHAASDFTKAFADLDEA 163
           R + Y    +   A+ D T+ +    + P     A+  R ++H+    D+ +A +D  +A
Sbjct: 69  RGSAYAVKGEQVWALADFTEAIR---LKPNYTF-AYNNRGLLHIERG-DYERALSDFSQA 123

Query: 164 EKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQRHFVVHKMIVPGD 223
             +DP  A +Y  RG  +   G+YE A+ + D+ I L+P++ +A   R           +
Sbjct: 124 ILIDPGYAKAYRNRGDAWVQKGEYERAISDYDQAIRLSPSYAMAYGSRGNAY------AN 177

Query: 224 RERVEQSLKEFRNFVDTHSNVVEACTLFAQVLVD-------QEDF------------DGA 264
           R   +++  ++   +  + N  EA      +  D        ED+            D A
Sbjct: 178 RGEYDKAAADYNQAIRINPNYAEAYINRGNIYYDIGYTNRGLEDYTRVLDINLSYGPDLA 237

Query: 265 EEYFNR-------------------SIRVDPENASLYVHRAMLMLQARGNVDEAIKLIEK 305
           + Y NR                   +I++ P  A ++ HR +      G  D AI+    
Sbjct: 238 KSYANRGLAYNNMGEYRRALTDYNEAIKLRPNLAVVFRHRGVSYTNL-GEYDLAIEDFTH 296

Query: 306 AISIDKSCMFAYETLGTIEVQRGRLEEAVKCFNKAL 341
           AI ++ +   AY   G    Q+G  ++A   +++A+
Sbjct: 297 AIILNPNYALAYINRGNAYSQKGLYDQARIDYHQAV 332



 Score = 53.1 bits (126), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 32/119 (26%), Positives = 61/119 (51%), Gaps = 3/119 (2%)

Query: 94  NHTKALARLLRATVYIFTSQSTKAIEDLTQLVE-DTSVDPKIKVNAHIKRAVVHLHAASD 152
           N   A A + R  +Y     + + +ED T++++ + S  P +   ++  R + + +   +
Sbjct: 195 NPNYAEAYINRGNIYYDIGYTNRGLEDYTRVLDINLSYGPDL-AKSYANRGLAY-NNMGE 252

Query: 153 FTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQR 211
           + +A  D +EA K+ PN+A  +  RG  Y   G+Y+ A+ +    I LNPN+ +A   R
Sbjct: 253 YRRALTDYNEAIKLRPNLAVVFRHRGVSYTNLGEYDLAIEDFTHAIILNPNYALAYINR 311



 Score = 39.7 bits (91), Expect = 4.1,   Method: Compositional matrix adjust.
 Identities = 26/87 (29%), Positives = 38/87 (43%), Gaps = 1/87 (1%)

Query: 454 NESGQKHAA-SDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIAL 512
           N  G  +A   +   A AD  EA ++ PN   +Y  RG ++   G YE AL +  + I +
Sbjct: 67  NNRGSAYAVKGEQVWALADFTEAIRLKPNYTFAYNNRGLLHIERGDYERALSDFSQAILI 126

Query: 513 NPNFHVARAQRHFVWTSTLAELMAFSD 539
           +P +  A   R   W        A SD
Sbjct: 127 DPGYAKAYRNRGDAWVQKGEYERAISD 153


>gi|374628480|ref|ZP_09700865.1| Tetratricopeptide TPR_1 repeat-containing protein [Methanoplanus
           limicola DSM 2279]
 gi|373906593|gb|EHQ34697.1| Tetratricopeptide TPR_1 repeat-containing protein [Methanoplanus
           limicola DSM 2279]
          Length = 419

 Score = 69.7 bits (169), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 92/387 (23%), Positives = 164/387 (42%), Gaps = 47/387 (12%)

Query: 155 KAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQRHFV 214
           KA+  + E+E   P +   +Y RG  Y    +Y++A    +K +A+ P    A   R   
Sbjct: 31  KAYESVSESEY--PEI---HYCRGNAYYGLLKYDKAAEAYNKAVAITPGDADAHYNRGNA 85

Query: 215 VHKMIVPGDRERVEQSLKEFRNFVDTHSNVVEACTLFAQVLVDQEDFDGAEEYFNRSIRV 274
           ++K+  P      +++++ +       S + EA      VL     ++ A   F  +I  
Sbjct: 86  LYKLGCP------DEAIEAYDKATGIDSRLAEAYNNKGNVLSKSGRYEEALAAFESAIAA 139

Query: 275 DPENASLYVHRAMLMLQARGNVDEAIKLIEKAISIDKSCMFAYETLGTIEVQRGRLEEAV 334
             + A  Y ++  L L + G  D+A+   +KAISI      AY   G    + GR +EA+
Sbjct: 140 GTDFAEGYNNKG-LSLSSLGQYDDAVLAFDKAISIRSDYAEAYYNRGNALYEAGRHDEAL 198

Query: 335 KCFNKALPLARDEAELSHIYSLRDAAIAQMKVCER----YNIKKKVSPRSQNITKNEKLA 390
             ++ A  +     E S  ++ R   + ++   E     ++    ++P+  ++  N+  A
Sbjct: 199 ASYDMAAEII---PENSLYHNNRALTLFELGRYEEAMAAFDRSLSLNPKDADLWFNKGFA 255

Query: 391 IKQLRE--------NNDIIIRPADKGGKTVVMDKADYTQKMT-SILNSNDYEIIPGDPTK 441
           +  L +         N + I P D         +A Y +    + L   D  II  D + 
Sbjct: 256 LNNLGQYDKALKAVENSVSINPDDA--------EAQYNKGFALNELGRYDEAIIALDRSV 307

Query: 442 TIEESEK-----YGNLENESGQKHAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLF 496
            I+          G +  E G+     D  KA+   D A  + P+ A  YYQ+G      
Sbjct: 308 AIDSGNSEVQCLRGAVLTELGRY---DDAVKAY---DLALGIVPDNATFYYQKGDAIGKT 361

Query: 497 GQYEEALRNLDKTIALNPNFHVARAQR 523
           G+YEEA+   D+ IALNP++  A +++
Sbjct: 362 GRYEEAISVYDQAIALNPDYAAAYSKK 388



 Score = 65.9 bits (159), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 46/202 (22%), Positives = 100/202 (49%), Gaps = 8/202 (3%)

Query: 139 HIKRAVVHLHAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTI 198
           H  RA+  L     + +A A  D +  ++P  AD ++ +G      GQY++AL+ ++ ++
Sbjct: 215 HNNRALT-LFELGRYEEAMAAFDRSLSLNPKDADLWFNKGFALNNLGQYDKALKAVENSV 273

Query: 199 ALNPNFHVARAQRHFVVHKMIVPGDRERVEQSLKEFRNFVDTHSNVVEACTLFAQVLVDQ 258
           ++NP+   A+  + F ++++       R ++++      V   S   E   L   VL + 
Sbjct: 274 SINPDDAEAQYNKGFALNEL------GRYDEAIIALDRSVAIDSGNSEVQCLRGAVLTEL 327

Query: 259 EDFDGAEEYFNRSIRVDPENASLYVHRAMLMLQARGNVDEAIKLIEKAISIDKSCMFAYE 318
             +D A + ++ ++ + P+NA+ Y  +   + +  G  +EAI + ++AI+++     AY 
Sbjct: 328 GRYDDAVKAYDLALGIVPDNATFYYQKGDAIGKT-GRYEEAISVYDQAIALNPDYAAAYS 386

Query: 319 TLGTIEVQRGRLEEAVKCFNKA 340
             G   +  GR ++A   ++ A
Sbjct: 387 KKGKALIHLGRYDDASAAYDMA 408



 Score = 60.5 bits (145), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 68/311 (21%), Positives = 133/311 (42%), Gaps = 50/311 (16%)

Query: 223 DRERVEQSLKEFRNFVDTHSNVVEACTLFAQVLVDQEDFDGAEEYFNRSIRVDPENASLY 282
           D  + E++LK + +  ++    +  C   A   + +  +D A E +N+++ + P +A  +
Sbjct: 22  DSGKFEEALKAYESVSESEYPEIHYCRGNAYYGLLK--YDKAAEAYNKAVAITPGDADAH 79

Query: 283 VHRAMLMLQARGNVDEAIKLIEKAISIDKSCMFAYETLGTIEVQRGRLEEAVKCFNKALP 342
            +R   + +  G  DEAI+  +KA  ID     AY   G +  + GR EEA+  F  A+ 
Sbjct: 80  YNRGNALYK-LGCPDEAIEAYDKATGIDSRLAEAYNNKGNVLSKSGRYEEALAAFESAIA 138

Query: 343 LARDEAELSHIYSLRDAAIAQMKVCERYNIKKKVSPRSQNITKNEKLAIKQLRENNDIII 402
              D                     E YN              N+ L++  L + +D ++
Sbjct: 139 AGTD-------------------FAEGYN--------------NKGLSLSSLGQYDDAVL 165

Query: 403 RPADKGGKTVVMDKADYTQKMTSILNS------NDYEIIPGD-PTKTIEESEKYGNLENE 455
              DK     +  ++DY +   +  N+      +D  +   D   + I E+  Y N  N 
Sbjct: 166 -AFDK----AISIRSDYAEAYYNRGNALYEAGRHDEALASYDMAAEIIPENSLYHN--NR 218

Query: 456 SGQKHAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPN 515
           +        + +A A  D +  ++P  AD ++ +G      GQY++AL+ ++ ++++NP+
Sbjct: 219 ALTLFELGRYEEAMAAFDRSLSLNPKDADLWFNKGFALNNLGQYDKALKAVENSVSINPD 278

Query: 516 FHVARAQRHFV 526
              A+  + F 
Sbjct: 279 DAEAQYNKGFA 289



 Score = 55.1 bits (131), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 75/365 (20%), Positives = 152/365 (41%), Gaps = 36/365 (9%)

Query: 153 FTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQRH 212
           + KA    ++A  + P  AD++Y RG      G  +EA+   DK   ++     A   + 
Sbjct: 58  YDKAAEAYNKAVAITPGDADAHYNRGNALYKLGCPDEAIEAYDKATGIDSRLAEAYNNKG 117

Query: 213 FVVHKMIVPGDRERVEQSLKEFRNFVDTHSNVVEACTLFAQVLVDQEDFDGAEEYFNRSI 272
            V+ K        R E++L  F + +   ++  E        L     +D A   F+++I
Sbjct: 118 NVLSK------SGRYEEALAAFESAIAAGTDFAEGYNNKGLSLSSLGQYDDAVLAFDKAI 171

Query: 273 RVDPENASLYVHRAMLMLQARGNVDEAIKLIEKAISIDKSCMFAYETLGTIEVQRGRLEE 332
            +  + A  Y +R   + +A G  DEA+   + A  I       +        + GR EE
Sbjct: 172 SIRSDYAEAYYNRGNALYEA-GRHDEALASYDMAAEIIPENSLYHNNRALTLFELGRYEE 230

Query: 333 AVKCFNKALPLARDEAELSHIYSLRDAAIAQM-KVCERYNIKKKVSPRSQNITKNEKLAI 391
           A+  F+++L L   +A+L          + Q  K  +       ++P       N+  A+
Sbjct: 231 AMAAFDRSLSLNPKDADLWFNKGFALNNLGQYDKALKAVENSVSINPDDAEAQYNKGFAL 290

Query: 392 KQLRENNDIIIRPADKGGKTVVMDKADYTQK------MTSILNSND----YE----IIPG 437
            +L   ++ II       ++V +D  +   +      +T +   +D    Y+    I+P 
Sbjct: 291 NELGRYDEAIIAL----DRSVAIDSGNSEVQCLRGAVLTELGRYDDAVKAYDLALGIVPD 346

Query: 438 DPTKTIEESEKYGNLENESGQKHAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFG 497
           + T   ++ +  G    ++G+      + +A +  D+A  ++P+ A +Y ++G+     G
Sbjct: 347 NATFYYQKGDAIG----KTGR------YEEAISVYDQAIALNPDYAAAYSKKGKALIHLG 396

Query: 498 QYEEA 502
           +Y++A
Sbjct: 397 RYDDA 401



 Score = 52.0 bits (123), Expect = 9e-04,   Method: Compositional matrix adjust.
 Identities = 70/342 (20%), Positives = 139/342 (40%), Gaps = 62/342 (18%)

Query: 104 RATVYIFTSQSTKAIEDLTQLVEDTSVDPKIKVNAHIKR--AVVHLHAASDFTKAFADLD 161
           R   Y    +  KA E   + V  T  D     +AH  R  A+  L    +  +A+   D
Sbjct: 48  RGNAYYGLLKYDKAAEAYNKAVAITPGD----ADAHYNRGNALYKLGCPDEAIEAY---D 100

Query: 162 EAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQRHFVVHKM--- 218
           +A  +D  +A++Y  +G +    G+YEEAL   +  IA   +F      +   +  +   
Sbjct: 101 KATGIDSRLAEAYNNKGNVLSKSGRYEEALAAFESAIAAGTDFAEGYNNKGLSLSSLGQY 160

Query: 219 ---IVPGDRE----------------------RVEQSLKEFRNFVDTHSNVVEACTLF-- 251
              ++  D+                       R +++L  +    D  + ++   +L+  
Sbjct: 161 DDAVLAFDKAISIRSDYAEAYYNRGNALYEAGRHDEALASY----DMAAEIIPENSLYHN 216

Query: 252 --AQVLVDQEDFDGAEEYFNRSIRVDPENASLYVHRAMLMLQARGNVDEAIKLIEKAISI 309
             A  L +   ++ A   F+RS+ ++P++A L+ ++    L   G  D+A+K +E ++SI
Sbjct: 217 NRALTLFELGRYEEAMAAFDRSLSLNPKDADLWFNKG-FALNNLGQYDKALKAVENSVSI 275

Query: 310 DKSCMFAYETLGTIEVQRGRLEEAVKCFNKALPLARDEAELSHIYSLRDAAIAQMKVCER 369
           +     A    G    + GR +EA+   ++++ +   ++  S +  LR A + ++     
Sbjct: 276 NPDDAEAQYNKGFALNELGRYDEAIIALDRSVAI---DSGNSEVQCLRGAVLTELG---- 328

Query: 370 YNIKKKVSPRSQNITKNEKLAIKQLRENNDIIIRPADKGGKT 411
                    R  +  K   LA+  + +N     +  D  GKT
Sbjct: 329 ---------RYDDAVKAYDLALGIVPDNATFYYQKGDAIGKT 361


>gi|313203959|ref|YP_004042616.1| hypothetical protein Palpr_1485 [Paludibacter propionicigenes WB4]
 gi|312443275|gb|ADQ79631.1| Tetratricopeptide TPR_1 repeat-containing protein [Paludibacter
           propionicigenes WB4]
          Length = 591

 Score = 69.7 bits (169), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 54/195 (27%), Positives = 94/195 (48%), Gaps = 13/195 (6%)

Query: 152 DFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQR 211
           D  KAF   +++  +DP  +  Y QRG  Y    Q+E+A  +  K I LN N   A   R
Sbjct: 13  DLQKAFLLAEKSISIDPYNSFGYLQRGGAYFQEDQFEKAFEDASKAIELNSNNAYAYNLR 72

Query: 212 HFVVHKMIVPGDRERVEQSLKEFRNFVDTHSNVVEACTLFAQVLVDQEDFDGAEEYFNRS 271
             V    +  G+ E+ E    EF+  +D   N V A         D +  + A E F+++
Sbjct: 73  ARV---FVKRGENEKAEV---EFKKAIDLDPNYVNAYNARGVFFTDLKQCEKAIEDFDKA 126

Query: 272 IRVDPENASLYVHRAMLMLQARGNVDEAIKLI---EKAISIDKSCMFAYETLGTIEVQRG 328
           + + P +A +Y +R +    A   +DE  K +    + + +D + +F Y   G + ++ G
Sbjct: 127 VELKPNSAYIYNNRGI----AWTKLDEDEKAMVDYNRTLELDSNYVFTYNNRGNLWLKLG 182

Query: 329 RLEEAVKCFNKALPL 343
            +++A+K +NKA+ L
Sbjct: 183 EIDKALKDYNKAIEL 197



 Score = 63.9 bits (154), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 63/251 (25%), Positives = 109/251 (43%), Gaps = 42/251 (16%)

Query: 270 RSIRVDPENASLYVHRAMLMLQARGNVDEAIKLIEKAISIDKSCMFAYETLGTIEVQRGR 329
           +SI +DP N+  Y+ R     Q     ++A +   KAI ++ +  +AY     + V+RG 
Sbjct: 23  KSISIDPYNSFGYLQRGGAYFQ-EDQFEKAFEDASKAIELNSNNAYAYNLRARVFVKRGE 81

Query: 330 LEEAVKCFNKALPLARDEAELSHIYSLRDAAIAQMKVCER----YNIKKKVSPRSQNITK 385
            E+A   F KA+ L   +    + Y+ R      +K CE+    ++   ++ P S  I  
Sbjct: 82  NEKAEVEFKKAIDL---DPNYVNAYNARGVFFTDLKQCEKAIEDFDKAVELKPNSAYIYN 138

Query: 386 NEKLAIKQLRENNDIIIRPADKGGKTVVMDKADYTQKMTSILNSNDYEIIPGDPTKTIEE 445
           N  +A  +L E+   ++               DY + +   L+SN            +  
Sbjct: 139 NRGIAWTKLDEDEKAMV---------------DYNRTLE--LDSN-----------YVFT 170

Query: 446 SEKYGNLENESGQKHAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRN 505
               GNL  + G+        KA  D ++A ++D N A++Y  RG +Y   G Y+ A+ N
Sbjct: 171 YNNRGNLWLKLGE------IDKALKDYNKAIELDSNFANAYRNRGILYFKIGNYDNAIEN 224

Query: 506 LDKTIALNPNF 516
             K I+L+  F
Sbjct: 225 FQKAISLDEGF 235



 Score = 47.4 bits (111), Expect = 0.021,   Method: Compositional matrix adjust.
 Identities = 48/187 (25%), Positives = 79/187 (42%), Gaps = 40/187 (21%)

Query: 65  LSKAKRAFEHEDYLTAIRHCTEEIESTSSNHTKALARLLRATVYIFTSQSTKAIEDLTQL 124
           L +    F+ + +  A    ++ IE  S+N   A A  LRA V++   ++ KA  +  + 
Sbjct: 36  LQRGGAYFQEDQFEKAFEDASKAIELNSNN---AYAYNLRARVFVKRGENEKAEVEFKKA 92

Query: 125 VEDTSVDPKIKVNAHIKRAVVHL------HAASDFTKA-----------------FADLD 161
           ++   +DP   VNA+  R V          A  DF KA                 +  LD
Sbjct: 93  ID---LDPNY-VNAYNARGVFFTDLKQCEKAIEDFDKAVELKPNSAYIYNNRGIAWTKLD 148

Query: 162 EAEK----------VDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQR 211
           E EK          +D N   +Y  RG ++   G+ ++AL++ +K I L+ NF  A   R
Sbjct: 149 EDEKAMVDYNRTLELDSNYVFTYNNRGNLWLKLGEIDKALKDYNKAIELDSNFANAYRNR 208

Query: 212 HFVVHKM 218
             +  K+
Sbjct: 209 GILYFKI 215



 Score = 42.0 bits (97), Expect = 0.80,   Method: Compositional matrix adjust.
 Identities = 37/134 (27%), Positives = 64/134 (47%), Gaps = 13/134 (9%)

Query: 77  YLTAIRHCTEEIESTSSNHTKALARLLRATVYIFTSQS---TKAIEDLTQLVE---DTSV 130
           + T ++ C + IE    +  KA+  L   + YI+ ++    TK  ED   +V+      +
Sbjct: 109 FFTDLKQCEKAIE----DFDKAV-ELKPNSAYIYNNRGIAWTKLDEDEKAMVDYNRTLEL 163

Query: 131 DPKIKVNAHIKRAVVHLHAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEA 190
           D    V  +  R  + L    +  KA  D ++A ++D N A++Y  RG +Y   G Y+ A
Sbjct: 164 DSNY-VFTYNNRGNLWLKLG-EIDKALKDYNKAIELDSNFANAYRNRGILYFKIGNYDNA 221

Query: 191 LRNLDKTIALNPNF 204
           + N  K I+L+  F
Sbjct: 222 IENFQKAISLDEGF 235



 Score = 40.4 bits (93), Expect = 2.3,   Method: Compositional matrix adjust.
 Identities = 20/62 (32%), Positives = 30/62 (48%)

Query: 467 KAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQRHFV 526
           KA  +  +A  +DPN  ++Y  RG  +    Q E+A+ + DK + L PN       R   
Sbjct: 84  KAEVEFKKAIDLDPNYVNAYNARGVFFTDLKQCEKAIEDFDKAVELKPNSAYIYNNRGIA 143

Query: 527 WT 528
           WT
Sbjct: 144 WT 145


>gi|301094298|ref|XP_002896255.1| UDP-N-acetylglucosamine-peptide N-acetylglucosaminyltransferase,
           putative [Phytophthora infestans T30-4]
 gi|262109650|gb|EEY67702.1| UDP-N-acetylglucosamine-peptide N-acetylglucosaminyltransferase,
           putative [Phytophthora infestans T30-4]
          Length = 977

 Score = 69.7 bits (169), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 91/396 (22%), Positives = 155/396 (39%), Gaps = 75/396 (18%)

Query: 147 LHAASDFTKAFADLDEAEK-----------------VDPNVADSYYQRGQIYCLFGQYEE 189
           +  A DF +A+ +L  A K                 ++P   D+Y      Y L GQ EE
Sbjct: 97  IRVAPDFAEAYGNLGNALKELGDVAGAVQFYVRAIKLNPRFGDAYNNLANCYMLLGQTEE 156

Query: 190 ALRNLDKTIALNPNF---HVARAQRHFVVHKMIVPGDRERVEQSLKEFRNFVDTHSNVVE 246
           A+      I L+P     H      + V  +++    +    Q+++   +F    SN+  
Sbjct: 157 AVETYKMAIMLDPRLVDAHSNLGNLYKVQGRLV--DAKHCYAQAIRVKPSFAIAWSNL-- 212

Query: 247 ACTLFAQVLVDQEDFDGAEEYFNRSIRVDPENASLYVHRAMLMLQARGNVDEAIKLIEKA 306
                A +L D    D A E++  +IR+ P+ A  Y +     L+  G VDEAI+  + A
Sbjct: 213 -----AGLLKDDGQLDAAVEHYREAIRLAPDFADAYSNLGN-ALKESGRVDEAIQAYKSA 266

Query: 307 ISIDKSCMFAYETLGTIEVQRGRLEEAVKCFNKALPLARDEAELSHIY-----SLRDAA- 360
           + I  +   A+  L +     G++E A+  F  A+ L   E      Y     +LR+   
Sbjct: 267 LQIRPNFAIAHGNLASCYYDAGQMELAIHTFRHAIQL---EPNFPDAYNNLGNALRECGH 323

Query: 361 IAQMKVCERYNIKKKVSPRSQNITKNEKLAIKQLRENNDIIIRPADKGGKTVVMDKADYT 420
           + Q   C R  ++ K  P   +   N   A+K             DKG    ++ +A + 
Sbjct: 324 LEQAVTCYRTALQLK--PDHPHAYNNLGNALK-------------DKG----LVKEALHC 364

Query: 421 QKMTSILNSNDYEIIPGDPTKTIEESEKYGNLENESGQKHAASDFTKAFADLDEAEKVDP 480
               +        ++P    +        G++  E G+        +A A   +A  +DP
Sbjct: 365 YTTAA-------RLLP----QFAAAHSNIGSVLKEQGK------LDQALAHYQQAITIDP 407

Query: 481 NVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNF 516
           N AD+Y   G ++    + EEA++     I L P F
Sbjct: 408 NFADAYSNMGNVFKDLCRLEEAIQCYSTAIRLKPQF 443



 Score = 51.6 bits (122), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 45/182 (24%), Positives = 77/182 (42%), Gaps = 9/182 (4%)

Query: 163 AEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNF-HVARAQRHFVVHKMIVP 221
           A +++PN  D+Y   G      G  E+A+      + L P+  H      + +  K +V 
Sbjct: 300 AIQLEPNFPDAYNNLGNALRECGHLEQAVTCYRTALQLKPDHPHAYNNLGNALKDKGLVK 359

Query: 222 GDRERVEQSLKEFRNFVDTHSNVVEACTLFAQVLVDQEDFDGAEEYFNRSIRVDPENASL 281
                   + +    F   HSN+         VL +Q   D A  ++ ++I +DP  A  
Sbjct: 360 EALHCYTTAARLLPQFAAAHSNI-------GSVLKEQGKLDQALAHYQQAITIDPNFADA 412

Query: 282 YVHRAMLMLQARGNVDEAIKLIEKAISIDKSCMFAYETLGTIEVQRGRLEEAVKCFNKAL 341
           Y +   +  +    ++EAI+    AI +      AY  L +     GRL++A+ C+ KAL
Sbjct: 413 YSNMGNV-FKDLCRLEEAIQCYSTAIRLKPQFPDAYSNLASAYKDGGRLDDAITCYRKAL 471

Query: 342 PL 343
            L
Sbjct: 472 AL 473



 Score = 43.9 bits (102), Expect = 0.20,   Method: Compositional matrix adjust.
 Identities = 30/117 (25%), Positives = 60/117 (51%), Gaps = 14/117 (11%)

Query: 228 EQSLKEFRNFVDTHSNVVEACTLFAQVLVDQEDFDGAEEYFNRSIRVDPENASLYVHRA- 286
           +Q ++   +F + + N+  A       L +  D  GA +++ R+I+++P     Y + A 
Sbjct: 94  QQCIRVAPDFAEAYGNLGNA-------LKELGDVAGAVQFYVRAIKLNPRFGDAYNNLAN 146

Query: 287 --MLMLQARGNVDEAIKLIEKAISIDKSCMFAYETLGTIEVQRGRLEEAVKCFNKAL 341
             ML+    G  +EA++  + AI +D   + A+  LG +   +GRL +A  C+ +A+
Sbjct: 147 CYMLL----GQTEEAVETYKMAIMLDPRLVDAHSNLGNLYKVQGRLVDAKHCYAQAI 199


>gi|428210653|ref|YP_007083797.1| hypothetical protein Oscil6304_0120 [Oscillatoria acuminata PCC
           6304]
 gi|427999034|gb|AFY79877.1| tetratricopeptide repeat protein [Oscillatoria acuminata PCC 6304]
          Length = 995

 Score = 69.7 bits (169), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 55/213 (25%), Positives = 92/213 (43%), Gaps = 9/213 (4%)

Query: 156 AFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQRHFVV 215
           A A  +EA     +  D+YY RG      GQ ++A+ + ++ I L PNF  A   R    
Sbjct: 114 AIASFNEAIHFKRDFPDAYYNRGVAQGQLGQNKDAIASFNEAICLKPNFPDAYYNRG--- 170

Query: 216 HKMIVPGDRERVEQSLKEFRNFVDTHSNVVEACTLFAQVLVDQEDFDGAEEYFNRSIRVD 275
              +V G   + E ++  F   +    N  +A  L          ++ A   FN +IR+ 
Sbjct: 171 ---VVQGQLGQKEDAIASFNEAICLKPNFSDAYYLRGLTQSQLGQYEDAIASFNEAIRLK 227

Query: 276 PENASLYVHRAMLMLQARGNVDEAIKLIEKAISIDKSCMFAYETLGTIEVQRGRLEEAVK 335
           P+    Y HR +++       ++AI    +AI        AY   G  +   G+ E+A+ 
Sbjct: 228 PDFPDAYFHRGIVLCDHLKQYEDAIASFNEAIRFKSDFDTAYCNRGVAQRNLGQYEDAIA 287

Query: 336 CFNKALPLARDEAELSHIYSLRDAAIAQMKVCE 368
            FN+A+ L  D    S+ Y  R  A ++++  E
Sbjct: 288 SFNEAIRLKPD---FSYAYFKRGVAQSKLRQYE 317



 Score = 65.9 bits (159), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 53/211 (25%), Positives = 93/211 (44%), Gaps = 9/211 (4%)

Query: 137 NAHIKRAVVHLHAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDK 196
           +A+  R V       +   A A  +EA  + PN  D+YY RG +    GQ E+A+ + ++
Sbjct: 130 DAYYNRGVAQGQLGQN-KDAIASFNEAICLKPNFPDAYYNRGVVQGQLGQKEDAIASFNE 188

Query: 197 TIALNPNFHVARAQRHFVVHKMIVPGDRERVEQSLKEFRNFVDTHSNVVEACTLFAQVLV 256
            I L PNF  A   R     ++       + E ++  F   +    +  +A      VL 
Sbjct: 189 AICLKPNFSDAYYLRGLTQSQL------GQYEDAIASFNEAIRLKPDFPDAYFHRGIVLC 242

Query: 257 DQ-EDFDGAEEYFNRSIRVDPENASLYVHRAMLMLQARGNVDEAIKLIEKAISIDKSCMF 315
           D  + ++ A   FN +IR   +  + Y +R +   +  G  ++AI    +AI +     +
Sbjct: 243 DHLKQYEDAIASFNEAIRFKSDFDTAYCNRGVAQ-RNLGQYEDAIASFNEAIRLKPDFSY 301

Query: 316 AYETLGTIEVQRGRLEEAVKCFNKALPLARD 346
           AY   G  + +  + E+A+  F+  L L RD
Sbjct: 302 AYFKRGVAQSKLRQYEDAIASFDSGLTLKRD 332



 Score = 48.1 bits (113), Expect = 0.011,   Method: Compositional matrix adjust.
 Identities = 53/210 (25%), Positives = 82/210 (39%), Gaps = 41/210 (19%)

Query: 321 GTIEVQRGRLEEAVKCFNKALPLARDEAELSHIYSLRDAAIAQMKVCE----RYNIKKKV 376
           G  +  RG   +A+  +N+A+ L RD  +    Y LR  A  Q+   E     +N     
Sbjct: 68  GKEQFYRGNFTDALASWNEAIRLKRDYPD---AYYLRGVAQGQLGQKEDAIASFNEAIHF 124

Query: 377 SPRSQNITKNEKLAIKQLRENNDIIIRPADKGGKTVVMDKADYTQKMTSILNSNDYEIIP 436
                +   N  +A  QL +N D I               A + + +          + P
Sbjct: 125 KRDFPDAYYNRGVAQGQLGQNKDAI---------------ASFNEAIC---------LKP 160

Query: 437 GDPTKTIEESEKYGNLENESGQKHAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLF 496
             P          G ++ + GQK        A A  +EA  + PN +D+YY RG      
Sbjct: 161 NFPDAYYNR----GVVQGQLGQKE------DAIASFNEAICLKPNFSDAYYLRGLTQSQL 210

Query: 497 GQYEEALRNLDKTIALNPNFHVARAQRHFV 526
           GQYE+A+ + ++ I L P+F  A   R  V
Sbjct: 211 GQYEDAIASFNEAIRLKPDFPDAYFHRGIV 240



 Score = 43.9 bits (102), Expect = 0.20,   Method: Compositional matrix adjust.
 Identities = 48/180 (26%), Positives = 79/180 (43%), Gaps = 15/180 (8%)

Query: 171 ADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQRHFVVHKMIVPGDRERVEQS 230
           A+  YQRG+     G + +AL + ++ I L  ++  A   R     ++   G +E    S
Sbjct: 61  AEELYQRGKEQFYRGNFTDALASWNEAIRLKRDYPDAYYLRGVAQGQL---GQKEDAIAS 117

Query: 231 LKEF----RNFVDTHSNVVEACTLFAQVLVDQEDFDGAEEYFNRSIRVDPENASLYVHRA 286
             E     R+F D + N   A     Q     +D   A   FN +I + P     Y +R 
Sbjct: 118 FNEAIHFKRDFPDAYYNRGVAQGQLGQ----NKD---AIASFNEAICLKPNFPDAYYNRG 170

Query: 287 MLMLQARGNVDEAIKLIEKAISIDKSCMFAYETLGTIEVQRGRLEEAVKCFNKALPLARD 346
           ++  Q  G  ++AI    +AI +  +   AY   G  + Q G+ E+A+  FN+A+ L  D
Sbjct: 171 VVQGQL-GQKEDAIASFNEAICLKPNFSDAYYLRGLTQSQLGQYEDAIASFNEAIRLKPD 229


>gi|158522429|ref|YP_001530299.1| hypothetical protein Dole_2418 [Desulfococcus oleovorans Hxd3]
 gi|158511255|gb|ABW68222.1| Tetratricopeptide TPR_2 repeat protein [Desulfococcus oleovorans
           Hxd3]
          Length = 827

 Score = 69.7 bits (169), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 52/196 (26%), Positives = 88/196 (44%), Gaps = 7/196 (3%)

Query: 151 SDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQ 210
            D  K  A L++A ++DP  A++ Y  G++    G  + A+  L++ + L P+  +A   
Sbjct: 574 GDREKTAALLEKAIRLDPASAEARYHLGELLARTGNPDNAMAQLEQALHLKPDHALA--- 630

Query: 211 RHFVVHKMIVPGDRERVEQSLKEFRNFVDTHSNVVEACTLFAQVLVDQEDFDGAEEYFNR 270
            H  +  + +   +   ++++  ++  +        A T  A  LV     D A  Y   
Sbjct: 631 -HNAMGNLWLQAGK--TDRAIDHYQKAIAIDPGFAAAHTNLADALVRTGKIDSALHYLET 687

Query: 271 SIRVDPENASLYVHRAMLMLQARGNVDEAIKLIEKAISIDKSCMFAYETLGTIEVQRGRL 330
                P++A L +   +L  Q  GN+  A  L +KA+SID  C      LG I  Q GRL
Sbjct: 688 VAASRPDDAGLLLKTGILH-QQNGNLPAAENLYQKALSIDPGCTACLNRLGMIHAQAGRL 746

Query: 331 EEAVKCFNKALPLARD 346
           ++A  CF +   L  D
Sbjct: 747 DKAAGCFEELALLVPD 762



 Score = 56.2 bits (134), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 69/306 (22%), Positives = 118/306 (38%), Gaps = 37/306 (12%)

Query: 72  FEHEDYLTAIRHCTEEIES--TSSNHTKALARLLRATVYIF---TSQSTKAIEDLTQLVE 126
           FEH  YL ++      + +  T   H   +   L A   IF   T Q      D T L  
Sbjct: 355 FEHRTYLPSVFVVAALVWAAITYIRHRPLVIGFLCAVTMIFGCWTFQRNTIWADDTALWR 414

Query: 127 D-TSVDPKIKVNAHIKRAVVHLHAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFG 185
           D T   P +    +     +     +D  +A A  + A ++DP     Y   G ++   G
Sbjct: 415 DVTEKSPNLARPWNNLGLALKNQGQTD--QAMAMYNRAIEIDPGYIHPYNNLGALFLETG 472

Query: 186 QYEEALRNLDKTIALNPNFHVARAQRHFVVHKM---------------IVPGDRE----- 225
           Q E+A   L+K I  +P F +A +      H++               I P D E     
Sbjct: 473 QPEKARPLLEKAIETDPLFMMAYSNLAIACHRLGDSEAAMAWCEKGLQISPNDLEIQNTL 532

Query: 226 --------RVEQSLKEFRNFVDTHSNVVEACTLFAQVLVDQEDFDGAEEYFNRSIRVDPE 277
                   R +++   F   +       EA    A +   Q D +       ++IR+DP 
Sbjct: 533 GVILLAQRREQEAAVLFEAVLQKDPGHTEALMNLALIADKQGDREKTAALLEKAIRLDPA 592

Query: 278 NASLYVHRAMLMLQARGNVDEAIKLIEKAISIDKSCMFAYETLGTIEVQRGRLEEAVKCF 337
           +A    H   L+ +  GN D A+  +E+A+ +      A+  +G + +Q G+ + A+  +
Sbjct: 593 SAEARYHLGELLART-GNPDNAMAQLEQALHLKPDHALAHNAMGNLWLQAGKTDRAIDHY 651

Query: 338 NKALPL 343
            KA+ +
Sbjct: 652 QKAIAI 657


>gi|428304585|ref|YP_007141410.1| hypothetical protein Cri9333_0985 [Crinalium epipsammum PCC 9333]
 gi|428246120|gb|AFZ11900.1| Tetratricopeptide TPR_1 repeat-containing protein [Crinalium
           epipsammum PCC 9333]
          Length = 287

 Score = 69.7 bits (169), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 51/193 (26%), Positives = 92/193 (47%), Gaps = 7/193 (3%)

Query: 151 SDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQ 210
            D+  A A  D+A K++   AD++Y R   Y L G Y EA+++  + I L P+F  A + 
Sbjct: 78  GDYKAAIALFDQAIKINSKDADAFYNRAYAYSLLGSYSEAVKDYTQAINLKPDFGDAYSN 137

Query: 211 RHFVVHKMIVPGDRERVEQSLKEFRNFVDTHSNVVEACTLFAQVLVDQEDFDGAEEYFNR 270
           R +  +   V G+    + ++ +    +  +    +A         D  +   A E +N+
Sbjct: 138 RAYAYY---VAGN---YQSAIADCTQAIRINPKNADAYIYKGNAYDDLGEHLAAIENYNQ 191

Query: 271 SIRVDPENASLYVHRAMLMLQARGNVDEAIKLIEKAISIDKSCMFAYETLGTIEVQRGRL 330
           ++ +DP+NA  Y +RA L    + N  +AI+   +++ +D     AY   G   +Q G+ 
Sbjct: 192 ALSIDPKNAKAYYNRA-LGYNRQNNHLKAIEDYTQSVRLDTKFAEAYYNRGVTSLQLGKK 250

Query: 331 EEAVKCFNKALPL 343
            EA++   KA  L
Sbjct: 251 AEAIEDIRKAADL 263



 Score = 50.4 bits (119), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 43/165 (26%), Positives = 81/165 (49%), Gaps = 15/165 (9%)

Query: 38  PILQPDGLSNGVELTNGDTNESHELDLLSKAKRAFEHEDYLTAIRHCTEEIESTSSNHTK 97
           PI  P      + +  G+T  S  +DL ++     E+ DY  AI    + I+  S +   
Sbjct: 48  PIQMP------MVVAQGNTQIS-AVDLYNRGVDQLENGDYKAAIALFDQAIKINSKD--- 97

Query: 98  ALARLLRATVYIFTSQSTKAIEDLTQLVEDTSVDPKIKVNAHIKRAVVHLHAASDFTKAF 157
           A A   RA  Y      ++A++D TQ +   ++ P    +A+  RA  + + A ++  A 
Sbjct: 98  ADAFYNRAYAYSLLGSYSEAVKDYTQAI---NLKPDFG-DAYSNRAYAY-YVAGNYQSAI 152

Query: 158 ADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNP 202
           AD  +A +++P  AD+Y  +G  Y   G++  A+ N ++ ++++P
Sbjct: 153 ADCTQAIRINPKNADAYIYKGNAYDDLGEHLAAIENYNQALSIDP 197



 Score = 48.1 bits (113), Expect = 0.011,   Method: Compositional matrix adjust.
 Identities = 22/65 (33%), Positives = 36/65 (55%)

Query: 463 SDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQ 522
            D+  A A  D+A K++   AD++Y R   Y L G Y EA+++  + I L P+F  A + 
Sbjct: 78  GDYKAAIALFDQAIKINSKDADAFYNRAYAYSLLGSYSEAVKDYTQAINLKPDFGDAYSN 137

Query: 523 RHFVW 527
           R + +
Sbjct: 138 RAYAY 142



 Score = 38.9 bits (89), Expect = 6.6,   Method: Compositional matrix adjust.
 Identities = 25/103 (24%), Positives = 48/103 (46%), Gaps = 1/103 (0%)

Query: 438 DPTKTIEESEKYGN-LENESGQKHAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLF 496
           D T+ I     +G+   N +   + A ++  A AD  +A +++P  AD+Y  +G  Y   
Sbjct: 120 DYTQAINLKPDFGDAYSNRAYAYYVAGNYQSAIADCTQAIRINPKNADAYIYKGNAYDDL 179

Query: 497 GQYEEALRNLDKTIALNPNFHVARAQRHFVWTSTLAELMAFSD 539
           G++  A+ N ++ ++++P    A   R   +      L A  D
Sbjct: 180 GEHLAAIENYNQALSIDPKNAKAYYNRALGYNRQNNHLKAIED 222


>gi|434389347|ref|YP_007099958.1| trypsin-like serine protease with C-terminal PDZ domain
           [Chamaesiphon minutus PCC 6605]
 gi|428020337|gb|AFY96431.1| trypsin-like serine protease with C-terminal PDZ domain
           [Chamaesiphon minutus PCC 6605]
          Length = 573

 Score = 69.3 bits (168), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 73/262 (27%), Positives = 117/262 (44%), Gaps = 14/262 (5%)

Query: 90  STSSNHTKALAR--LLRATVYIFTSQSTKAIEDLTQLVEDTSVDPKIKVNAHIKRAVVHL 147
           +T++N T  L    L+ ATV + +     A+ +L + +   + +PK K  A+  R+ VH 
Sbjct: 240 ATANNKTIDLGGDALVSATVKLQSGDYQGALAELNRAI---AANPK-KAAAYYMRSNVH- 294

Query: 148 HAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVA 207
               D  +  ADL++A ++D   A +YY RG I      Y+ A  + D+TIA++P +  A
Sbjct: 295 QMLGDRPQVLADLNKAIELDTKNASAYYLRGNILYANQDYKGAAADFDRTIAIDPKYTQA 354

Query: 208 RAQRHFVVHKMIVPGDRERVEQSLKEFRNFVDTHSNVVEACTLFAQVLVDQEDFDGAEEY 267
              R        V GD    + +   +   +        A    A V V   +F GA E 
Sbjct: 355 YLLRAITAQ---VQGDLPGAQAA---YTKMIAADPQNTLAYNNRAGVRVQLNNFPGAIED 408

Query: 268 FNRSIRVDPENASLYVHRAMLMLQARGNVDEAIKLIEKAISIDKSCMFAYETLGTIEVQR 327
           F+  I++ PE  S Y  RA    +A G++  AI    K I I  + + AY     I  +R
Sbjct: 409 FSEVIKIAPETTSAYDSRANFR-KATGDIAGAIADYTKIIQISPNNLRAYSYRAAIYQER 467

Query: 328 GRLEEAVKCFNKALPLARDEAE 349
                A+K +   L +  +E E
Sbjct: 468 KEWTLALKDYASMLKINPNETE 489



 Score = 41.6 bits (96), Expect = 0.98,   Method: Compositional matrix adjust.
 Identities = 76/348 (21%), Positives = 139/348 (39%), Gaps = 22/348 (6%)

Query: 177 RGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQRHFVVHKMIVP-GDRERVEQSLKEFR 235
           RG++  + G+ +        T  LNPN  V       ++  + VP   +  V+  +    
Sbjct: 186 RGELIAIHGRGDVEKSTTAST--LNPNVRVKTGFNLGILASVFVPLATQTGVKMEVATAN 243

Query: 236 N-FVDTHSNVVEACTLFAQVLVDQEDFDGAEEYFNRSIRVDPENASLYVHRAMLMLQARG 294
           N  +D   + + + T    V +   D+ GA    NR+I  +P+ A+ Y  R+ +  Q  G
Sbjct: 244 NKTIDLGGDALVSAT----VKLQSGDYQGALAELNRAIAANPKKAAAYYMRSNVH-QMLG 298

Query: 295 NVDEAIKLIEKAISIDKSCMFAYETLGTIEVQRGRLEEAVKCFNKALPLARDEAELSHIY 354
           +  + +  + KAI +D     AY   G I       + A   F++ + +   + + +  Y
Sbjct: 299 DRPQVLADLNKAIELDTKNASAYYLRGNILYANQDYKGAAADFDRTIAI---DPKYTQAY 355

Query: 355 SLRDAAIAQMK---VCERYNIKKKVSPRSQN-ITKNEKLAIKQLRENNDIIIRPADKGGK 410
            LR A  AQ++      +    K ++   QN +  N +  ++    N    I    +  K
Sbjct: 356 LLR-AITAQVQGDLPGAQAAYTKMIAADPQNTLAYNNRAGVRVQLNNFPGAIEDFSEVIK 414

Query: 411 TVVMDKADYTQKMTSILNSNDYEIIPGDPTKTIEESEKYGNLENESGQK---HAASDFTK 467
                 + Y  +      + D      D TK I+ S    NL   S +        ++T 
Sbjct: 415 IAPETTSAYDSRANFRKATGDIAGAIADYTKIIQISPN--NLRAYSYRAAIYQERKEWTL 472

Query: 468 AFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPN 515
           A  D     K++PN  ++Y ++ +IY     +   +  LD  + LNPN
Sbjct: 473 ALKDYASMLKINPNETEAYSEQLKIYRQLKDFRGVVNALDGLVRLNPN 520



 Score = 38.5 bits (88), Expect = 9.6,   Method: Compositional matrix adjust.
 Identities = 19/54 (35%), Positives = 31/54 (57%)

Query: 463 SDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNF 516
            D  +  ADL++A ++D   A +YY RG I      Y+ A  + D+TIA++P +
Sbjct: 298 GDRPQVLADLNKAIELDTKNASAYYLRGNILYANQDYKGAAADFDRTIAIDPKY 351


>gi|291234181|ref|XP_002737022.1| PREDICTED: P58IPK-like [Saccoglossus kowalevskii]
          Length = 1148

 Score = 69.3 bits (168), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 66/275 (24%), Positives = 122/275 (44%), Gaps = 13/275 (4%)

Query: 105 ATVYIFTSQSTKAIEDLTQLVEDTSVDPKIKVNAHIKRAVVHLHAASDFTKAFADLDEAE 164
           + V + T      IE LT L++D   +P I    H++ A            A ADL +A 
Sbjct: 442 SIVLLNTKNYDGCIEQLTSLLKD---NPNIIGAYHVRGAAYAKKGFQSADSAIADLSKAI 498

Query: 165 KVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQRHFVVHKMIVPGDR 224
           ++ PN  + + +R +IY   G+  EAL +L   I L P+   A+A      H+  V    
Sbjct: 499 QLQPNAPEGWERRAEIYMSLGRTNEALADLTTAITLVPS---AKA----YAHRGTVHFKE 551

Query: 225 ERVEQSLKEFRNFVDTHSNVVEACTLFAQVLVDQEDFDGAEEYFNRSIRVDPENASLYVH 284
           E    + ++F+  ++  S   E        L  Q     + E FN +++++P    +   
Sbjct: 552 ENYLAAEEDFQKSLELDSKQSEIMHFRGLALYHQGKIKDSIEVFNTTLKLEP--LCVDCR 609

Query: 285 RAML-MLQARGNVDEAIKLIEKAISIDKSCMFAYETLGTIEVQRGRLEEAVKCFNKALPL 343
           R++    +  G+ + +++    A+S+ +  + + +  G++  Q GR  EA+K FNK L +
Sbjct: 610 RSLGHAYRELGDFETSMQHFNTALSLQEDHVQSLQLRGSLLYQSGRPLEALKDFNKCLSV 669

Query: 344 ARDEAELSHIYSLRDAAIAQMKVCERYNIKKKVSP 378
                   ++  L  A+I Q     + N K + +P
Sbjct: 670 DSTNEACEYMRGLSHASIGQYYEAVKSNAKVQSNP 704



 Score = 40.0 bits (92), Expect = 3.4,   Method: Compositional matrix adjust.
 Identities = 28/105 (26%), Positives = 49/105 (46%), Gaps = 5/105 (4%)

Query: 426 ILNSNDYEIIPGDPTKTIEESEKYGNLENESGQKHAASDFTKA---FADLDEAEKVDPNV 482
           +LN+ +Y+      T  ++++       +  G  +A   F  A    ADL +A ++ PN 
Sbjct: 445 LLNTKNYDGCIEQLTSLLKDNPNIIGAYHVRGAAYAKKGFQSADSAIADLSKAIQLQPNA 504

Query: 483 ADSYYQRGQIYCLFGQYEEALRNLDKTIALNPN--FHVARAQRHF 525
            + + +R +IY   G+  EAL +L   I L P+   +  R   HF
Sbjct: 505 PEGWERRAEIYMSLGRTNEALADLTTAITLVPSAKAYAHRGTVHF 549


>gi|225620899|ref|YP_002722157.1| TPR domain-containing protein [Brachyspira hyodysenteriae WA1]
 gi|225215719|gb|ACN84453.1| TPR domain-containing protein [Brachyspira hyodysenteriae WA1]
          Length = 952

 Score = 69.3 bits (168), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 57/225 (25%), Positives = 100/225 (44%), Gaps = 9/225 (4%)

Query: 119 EDLTQLVEDTSVDPKIKVNAHIKRAVVHLHAASDFTKAFADLDEAEKVDPNVADSYYQRG 178
           E +    E   ++PK  V ++  R V        + ++  D +E  K++P   +SY+ RG
Sbjct: 265 ESIVDFNEIIKLNPK-NVESYFNRGVSKAKLEK-YEESIVDFNEVIKLNPKNVESYFNRG 322

Query: 179 QIYCLFGQYEEALRNLDKTIALNPNFHVARAQRHFVVHKMIVPGDRERVEQSLKEFRNFV 238
                  +YEEA+ + +  I LNPN               +   D ER E+S+ +F   +
Sbjct: 323 VSKAKLEKYEEAIADFNNAIKLNPN------DEKVYFASGLAKADLERYEESIVDFNEVI 376

Query: 239 DTHSNVVEACTLFAQVLVDQEDFDGAEEYFNRSIRVDPENASLYVHRAMLMLQARGNVDE 298
             +S  VEA         D E ++ +   FN  I++DP+N   Y +R +   +     +E
Sbjct: 377 KLNSKNVEAYFYRGVAKADLERYEESIVDFNEVIKLDPKNVEAYFYRGVSKAKLEK-YEE 435

Query: 299 AIKLIEKAISIDKSCMFAYETLGTIEVQRGRLEEAVKCFNKALPL 343
           +I    + I+ + +   AY   G  + Q  R ++A+  FNK + L
Sbjct: 436 SIIDFNEVITFNPNDEKAYFNRGLSKAQLERYKKAIVDFNKVIKL 480



 Score = 69.3 bits (168), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 103/460 (22%), Positives = 192/460 (41%), Gaps = 40/460 (8%)

Query: 77  YLTAIRHCTEEIESTSSNHTKALARLLRATVYIFTSQSTKAIEDLTQLVEDTSVDPKIKV 136
           Y  AI++  + I     N      R L  T      +   AIED  + +E    + +   
Sbjct: 59  YEEAIKYFNKTIGLNQKNRDAYFFRGLAKTELKLYEE---AIEDFNESIELNLKNWESYF 115

Query: 137 NAHIKRAVVHLHAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDK 196
              I +A + L     + +A  D +++ +++P    +Y+ RG       +YEE++ + +K
Sbjct: 116 ARGIAKANLKL-----YEEAIEDFNKSIELNPKNEKAYFNRGISKAKLKKYEESIVDFNK 170

Query: 197 TIALNPNFHVARAQRHFVVHKMIVPGDRERVEQSLKEFRNFVDTHSNVVEACTLFAQVLV 256
            I LNP    A   R F   K+      ++ E+S+ +F N +   S  VE          
Sbjct: 171 VIELNPKNEKAYFNRGFAKAKL------KKYEKSIVDFNNAIKLDSKNVEVYFYRGISKA 224

Query: 257 DQEDFDGAEEYFNRSIRVDPENASLYVHRAMLMLQARGNVDEAIKLIEKAISIDKSCMFA 316
             E ++ +   FN +I++D +N  +Y +R +   +     +E+I    + I ++   + +
Sbjct: 225 KLERYEESIVDFNNAIKLDSKNVEVYFYRGVSKAKLER-YEESIVDFNEIIKLNPKNVES 283

Query: 317 YETLGTIEVQRGRLEEAVKCFNKALPLARDEAELSHIYSLRDAAIAQMKVCER----YNI 372
           Y   G  + +  + EE++  FN+ + L     E    Y  R  + A+++  E     +N 
Sbjct: 284 YFNRGVSKAKLEKYEESIVDFNEVIKLNPKNVES---YFNRGVSKAKLEKYEEAIADFNN 340

Query: 373 KKKVSPRSQNITKNEKLAIKQLRENNDII------IRPADKGGKTVV---MDKADYTQKM 423
             K++P  + +     LA   L    + I      I+   K  +      + KAD  +  
Sbjct: 341 AIKLNPNDEKVYFASGLAKADLERYEESIVDFNEVIKLNSKNVEAYFYRGVAKADLERYE 400

Query: 424 TSILNSNDYEIIPGDPTKTIEESEKYGNLENESGQKHAASDFTKAFADLDEAEKVDPNVA 483
            SI++ N  E+I  DP     E+  Y  +     +K+  S       D +E    +PN  
Sbjct: 401 ESIVDFN--EVIKLDPKNV--EAYFYRGVSKAKLEKYEES-----IIDFNEVITFNPNDE 451

Query: 484 DSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQR 523
            +Y+ RG       +Y++A+ + +K I LNP   +A   R
Sbjct: 452 KAYFNRGLSKAQLERYKKAIVDFNKVIKLNPKNEIAYLAR 491



 Score = 60.8 bits (146), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 83/348 (23%), Positives = 147/348 (42%), Gaps = 52/348 (14%)

Query: 174 YYQRGQIYCLFGQYEEALRNLDKTIALNPN-----FHVARAQRHFVVHKMIVPGDRERVE 228
           Y+ RG        YEEA++  +KTI LN       F    A+    +++  +    E +E
Sbjct: 46  YFNRGLEKIESKLYEEAIKYFNKTIGLNQKNRDAYFFRGLAKTELKLYEEAIEDFNESIE 105

Query: 229 QSLKEFRNFVDTHSNVVEA-CTLFAQVLVDQEDFDGAEEYFNRSIRVDPENASLYVHRAM 287
            +LK + ++      + +A   L+ + + D          FN+SI ++P+N   Y +R +
Sbjct: 106 LNLKNWESYF--ARGIAKANLKLYEEAIED----------FNKSIELNPKNEKAYFNRGI 153

Query: 288 LMLQARGNVDEAIKLIEKAISIDKSCMFAYETLGTIEVQRGRLEEAVKCFNKALPLARDE 347
              + +   +E+I    K I ++     AY   G  + +  + E+++  FN A+ L    
Sbjct: 154 SKAKLKK-YEESIVDFNKVIELNPKNEKAYFNRGFAKAKLKKYEKSIVDFNNAIKLDSKN 212

Query: 348 AELSHIYSLRDAAIAQMKVCERYNIKKKVSPRSQNITKNEKLAIKQLRENNDIIIRPADK 407
            E   +Y  R  + A++   ERY          ++I      AIK   +N ++       
Sbjct: 213 VE---VYFYRGISKAKL---ERY---------EESIVDFNN-AIKLDSKNVEVYFYRG-- 254

Query: 408 GGKTVVMDKADYTQKMTSILNSNDYEIIPGDPTKTIEESEKYGNLENESGQKHAASDFTK 467
                 + KA   +   SI++ N  EII  +P       E Y N       K     + +
Sbjct: 255 ------VSKAKLERYEESIVDFN--EIIKLNPKNV----ESYFN---RGVSKAKLEKYEE 299

Query: 468 AFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPN 515
           +  D +E  K++P   +SY+ RG       +YEEA+ + +  I LNPN
Sbjct: 300 SIVDFNEVIKLNPKNVESYFNRGVSKAKLEKYEEAIADFNNAIKLNPN 347



 Score = 45.4 bits (106), Expect = 0.075,   Method: Compositional matrix adjust.
 Identities = 54/253 (21%), Positives = 107/253 (42%), Gaps = 43/253 (16%)

Query: 119 EDLTQLVEDTSVDPKIKVNAHIKRAVVHLHAASDFTKAFADLDEAEKVDPNVADSYYQRG 178
           E +    E   ++PK  V ++  R V        + +A AD + A K++PN    Y+  G
Sbjct: 299 ESIVDFNEVIKLNPK-NVESYFNRGVSKAKLEK-YEEAIADFNNAIKLNPNDEKVYFASG 356

Query: 179 QIYCLFGQYEEALRNLDKTIALNPNFHVARAQRHFVVHKMIVPGDRERVEQSLKEFRNFV 238
                  +YEE++ + ++ I LN        + +F  ++ +   D ER E+S+ +F   +
Sbjct: 357 LAKADLERYEESIVDFNEVIKLNS----KNVEAYF--YRGVAKADLERYEESIVDFNEVI 410

Query: 239 DTHSNVVEACTL----------FAQVLVDQED---FDGAEE--YFNRS------------ 271
                 VEA             + + ++D  +   F+  +E  YFNR             
Sbjct: 411 KLDPKNVEAYFYRGVSKAKLEKYEESIIDFNEVITFNPNDEKAYFNRGLSKAQLERYKKA 470

Query: 272 -------IRVDPENASLYVHRAMLMLQARGNVDEAIKLIEKAISIDKSCMFAYETLGTIE 324
                  I+++P+N   Y+ R +   + +   +EAI    KAI ++ +   +Y   G ++
Sbjct: 471 IVDFNKVIKLNPKNEIAYLARGISNYELKK-YEEAIVDFNKAIKLNPNNEESYFNRGILK 529

Query: 325 VQRGRLEEAVKCF 337
           +   + ++A+  F
Sbjct: 530 IHLKKYKQAINDF 542


>gi|427725276|ref|YP_007072553.1| hypothetical protein Lepto7376_3522 [Leptolyngbya sp. PCC 7376]
 gi|427356996|gb|AFY39719.1| Tetratricopeptide TPR_1 repeat-containing protein [Leptolyngbya sp.
           PCC 7376]
          Length = 399

 Score = 69.3 bits (168), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 40/129 (31%), Positives = 65/129 (50%), Gaps = 6/129 (4%)

Query: 151 SDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQ 210
            DFT A AD DE  K++  +   ++ RG  +   GQ++ AL   DK IA+ P   VA   
Sbjct: 250 GDFTGAIADWDEVLKMNDRIPQVWHNRGSAFGCIGQFQSALECFDKAIAILPEGVVAWKD 309

Query: 211 RHFVVHKMIVPGDRERVEQSLKEFRNFVDTHSNVVEACTLFAQVLVDQEDFDGAEEYFNR 270
           R + + K+      ER + +L+ + + +D   NV EA       L   E FD A+  + +
Sbjct: 310 RSYALMKL------ERWQDALESWNHTIDLRDNVAEAWFQRGCTLERLEKFDNAQINYRK 363

Query: 271 SIRVDPENA 279
           +I ++P+ A
Sbjct: 364 AIALEPDFA 372



 Score = 48.5 bits (114), Expect = 0.009,   Method: Compositional matrix adjust.
 Identities = 23/64 (35%), Positives = 33/64 (51%)

Query: 463 SDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQ 522
            DFT A AD DE  K++  +   ++ RG  +   GQ++ AL   DK IA+ P   VA   
Sbjct: 250 GDFTGAIADWDEVLKMNDRIPQVWHNRGSAFGCIGQFQSALECFDKAIAILPEGVVAWKD 309

Query: 523 RHFV 526
           R + 
Sbjct: 310 RSYA 313


>gi|218441625|ref|YP_002379954.1| serine/threonine protein kinase [Cyanothece sp. PCC 7424]
 gi|218174353|gb|ACK73086.1| serine/threonine protein kinase with TPR repeats [Cyanothece sp.
           PCC 7424]
          Length = 730

 Score = 69.3 bits (168), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 44/206 (21%), Positives = 99/206 (48%), Gaps = 11/206 (5%)

Query: 147 LHAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHV 206
           L    ++ +A    ++A K++P+ + ++YQ+G  Y    +Y +A  +  + +   P+ + 
Sbjct: 507 LQNLKNYEEAIKSYEKAVKINPSFSQAWYQKGNSYMNLEKYSQAGESYRQAVQFQPDLYQ 566

Query: 207 ARAQRHFVVHKMIVPGDRERVEQSLKEFRNFVDTHSNVVEACTLFAQVLVDQEDFDGAEE 266
           A   +   ++++       R  ++LK F        N  EA    A  L     +  A E
Sbjct: 567 AWYSQGIALNRL------NRYREALKAFEEGTQIQPNSFEAWYQKAWTLQTLNRYGEAVE 620

Query: 267 YFNRSIRVDPENASLYVHR--AMLMLQARGNVDEAIKLIEKAISIDKSCMFAYETLGTIE 324
            +N + R++P+N   + ++  ++ +L+   +  +AI   ++ IS+DK    A+++LG   
Sbjct: 621 AYNTATRLNPKNPQAWYNKGNSLYLLE---DYQQAIAAYQQVISLDKDFYPAWKSLGNSF 677

Query: 325 VQRGRLEEAVKCFNKALPLARDEAEL 350
            +  R  EA+K +++ L    D+ ++
Sbjct: 678 FKLKRYSEAIKAYDQTLRYKSDDRQV 703



 Score = 59.3 bits (142), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 47/204 (23%), Positives = 92/204 (45%), Gaps = 12/204 (5%)

Query: 144 VVHLHAASDFTKAF-ADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNP 202
           +  L    D  +A+ A LD     +PN   ++  +G       +Y+ AL   D+ I L P
Sbjct: 371 LYQLQRYQDALQAYEASLD----TNPNNPPTWKGKGDALQALKRYQNALEAYDEAIQLQP 426

Query: 203 NFHVARAQRHFVVHKMIVPGDRERVEQSLKEFRNFVDTHSNVVEACTLFAQVLVDQEDFD 262
           N+  A  +R  V+ K+       +  +++  +   +D   N  +A     ++ V  +D+ 
Sbjct: 427 NYWQAWMERAEVLEKL------GKNSEAIYSYEKVIDFTPNEWQAWQNLGEIQVKLQDYA 480

Query: 263 GAEEYFNRSIRVDPENASLYVHRAMLMLQARGNVDEAIKLIEKAISIDKSCMFAYETLGT 322
            A    N+S++++P++   +  +    LQ   N +EAIK  EKA+ I+ S   A+   G 
Sbjct: 481 TALVSLNKSLQINPDDEWSWYQKG-FALQNLKNYEEAIKSYEKAVKINPSFSQAWYQKGN 539

Query: 323 IEVQRGRLEEAVKCFNKALPLARD 346
             +   +  +A + + +A+    D
Sbjct: 540 SYMNLEKYSQAGESYRQAVQFQPD 563



 Score = 44.3 bits (103), Expect = 0.18,   Method: Compositional matrix adjust.
 Identities = 61/291 (20%), Positives = 117/291 (40%), Gaps = 36/291 (12%)

Query: 225 ERVEQSLKEFRNFVDTHSNVVEACTLFAQVLVDQEDFDGAEEYFNRSIRVDPENASLYVH 284
           +R + +L+ +   +DT+ N           L   + +  A E ++ +I++ P     ++ 
Sbjct: 375 QRYQDALQAYEASLDTNPNNPPTWKGKGDALQALKRYQNALEAYDEAIQLQPNYWQAWME 434

Query: 285 RAMLMLQARGNVDEAIKLIEKAISIDKSCMFAYETLGTIEVQRGRLEEAVKCFNKALPLA 344
           RA  +L+  G   EAI   EK I    +   A++ LG I+V+      A+   NK+L + 
Sbjct: 435 RAE-VLEKLGKNSEAIYSYEKVIDFTPNEWQAWQNLGEIQVKLQDYATALVSLNKSLQIN 493

Query: 345 RDEAELSHIYSLRDAAIAQMKVCERYNIKKKVSPRSQNITKNEKLAIKQLRENNDIIIRP 404
            D+      +S      A                  QN+ KN + AIK   +   + I P
Sbjct: 494 PDDE-----WSWYQKGFA-----------------LQNL-KNYEEAIKSYEK--AVKINP 528

Query: 405 ADKGGKTVVMDKADYTQKMTSILNSNDYEIIPGDPTKTIE-ESEKYGNLENESGQKHAAS 463
           +          +A Y QK  S +N   Y        + ++ + + Y    ++    +  +
Sbjct: 529 S--------FSQAWY-QKGNSYMNLEKYSQAGESYRQAVQFQPDLYQAWYSQGIALNRLN 579

Query: 464 DFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNP 514
            + +A    +E  ++ PN  +++YQ+        +Y EA+   +    LNP
Sbjct: 580 RYREALKAFEEGTQIQPNSFEAWYQKAWTLQTLNRYGEAVEAYNTATRLNP 630



 Score = 41.6 bits (96), Expect = 0.96,   Method: Compositional matrix adjust.
 Identities = 18/60 (30%), Positives = 36/60 (60%)

Query: 464 DFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQR 523
           D+  A   L+++ +++P+   S+YQ+G        YEEA+++ +K + +NP+F  A  Q+
Sbjct: 478 DYATALVSLNKSLQINPDDEWSWYQKGFALQNLKNYEEAIKSYEKAVKINPSFSQAWYQK 537


>gi|414076416|ref|YP_006995734.1| TPR repeat-containing serine/threonine protein kinase [Anabaena sp.
           90]
 gi|413969832|gb|AFW93921.1| TPR repeat-containing serine/threonine protein kinase [Anabaena sp.
           90]
          Length = 689

 Score = 69.3 bits (168), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 75/376 (19%), Positives = 159/376 (42%), Gaps = 50/376 (13%)

Query: 153 FTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQRH 212
           + +A A  ++A  + P+   + Y +G+      +Y+E+L   D+ I + PN+  A   R 
Sbjct: 346 YQEALATYEKAIDIKPDYPQALYGQGKALFQLKKYQESLIAYDQAIQIQPNYLEAWTNRG 405

Query: 213 FVVHKMIVPGDRERVEQSLKEFRNFVDTHSNVVEACTLFAQVLVDQEDFDGAEEYFNRSI 272
           FV+ ++      +R  +++      +   ++  +   L   + +    ++ A + + ++I
Sbjct: 406 FVLVRL------KRYSEAIATVDKALQLKNDDPQIWQLKGDIFIKISQYNDAIKAYEQAI 459

Query: 273 RVDPENASLYVHRAMLMLQARGNVDEAIKLIEKAISIDKSCMFAYETLGTIEVQRGRLEE 332
               +N  L+ ++  L  Q     +EAI   +K + +      A+  LG   V   R E 
Sbjct: 460 NFQADNPELW-YKKGLAFQNLKQYEEAITAYKKTVELKPDHESAWYNLGNCLVNLNRYEF 518

Query: 333 AVKCFNKALPLARDE--AELSH---IYSLRDAAIAQMKVCERYNIKKKVSPRSQNITKNE 387
           A++ +++A+   ++   A LS    + +LR  + A     + +    K +P+      N 
Sbjct: 519 ALQAYDQAVQYNQNNSAAWLSRSNILMTLRRYSEA----IDSFTQVIKTNPQQYQAWYNR 574

Query: 388 KLAIKQLRENNDIIIRPADKGGKTVVMDKADYTQKMTSILNSNDYEIIPGDPTKTIEESE 447
             A+ Q++   + I                 Y + ++  L SNDY +             
Sbjct: 575 GWALHQVKRYGEAI---------------ESYKKAIS--LKSNDYLV------------- 604

Query: 448 KYGNLENESGQKHAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLD 507
            + NL N    ++    + +A A  ++A +  PN  +S+Y +G  +    QY++A+ + D
Sbjct: 605 -WYNLGNT---QYNLQKYQEAIASYNKATRYKPNHYESWYSKGNAWLNLQQYQQAIASYD 660

Query: 508 KTIALNPNFHVARAQR 523
           K I   P++  A   R
Sbjct: 661 KAIEYKPDYQQAIQAR 676



 Score = 56.2 bits (134), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 59/278 (21%), Positives = 125/278 (44%), Gaps = 17/278 (6%)

Query: 64  LLSKAKRAFEHEDYLTAIRHCTEEIESTSSNHTKALARLLRATVYIFTSQSTKAIEDLTQ 123
           L  + K  F+ + Y  ++    + I+    N+ +A     R  V +   + ++AI  + +
Sbjct: 367 LYGQGKALFQLKKYQESLIAYDQAIQ-IQPNYLEAWTN--RGFVLVRLKRYSEAIATVDK 423

Query: 124 LVEDTSVDPKIKVNAHIKRAV-VHLHAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYC 182
            ++  + DP+I     +K  + + +   +D  KA+      +  +P +   +Y++G  + 
Sbjct: 424 ALQLKNDDPQI---WQLKGDIFIKISQYNDAIKAYEQAINFQADNPEL---WYKKGLAFQ 477

Query: 183 LFGQYEEALRNLDKTIALNPNFHVARAQRHFVVHKMIVPGDRERVEQSLKEFRNFVDTHS 242
              QYEEA+    KT+ L P+   A     + +   +V  +  R E +L+ +   V  + 
Sbjct: 478 NLKQYEEAITAYKKTVELKPDHESA----WYNLGNCLV--NLNRYEFALQAYDQAVQYNQ 531

Query: 243 NVVEACTLFAQVLVDQEDFDGAEEYFNRSIRVDPENASLYVHRAMLMLQARGNVDEAIKL 302
           N   A    + +L+    +  A + F + I+ +P+    + +R   + Q +    EAI+ 
Sbjct: 532 NNSAAWLSRSNILMTLRRYSEAIDSFTQVIKTNPQQYQAWYNRGWALHQVK-RYGEAIES 590

Query: 303 IEKAISIDKSCMFAYETLGTIEVQRGRLEEAVKCFNKA 340
            +KAIS+  +    +  LG  +    + +EA+  +NKA
Sbjct: 591 YKKAISLKSNDYLVWYNLGNTQYNLQKYQEAIASYNKA 628


>gi|91774230|ref|YP_566922.1| tetratricopeptide protein [Methanococcoides burtonii DSM 6242]
 gi|91713245|gb|ABE53172.1| Tetratricopeptide repeat protein [Methanococcoides burtonii DSM
           6242]
          Length = 573

 Score = 69.3 bits (168), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 78/349 (22%), Positives = 154/349 (44%), Gaps = 19/349 (5%)

Query: 172 DSYY-QRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQRHFVVHKMIVPGDRERVEQS 230
           DSY+  +G   C   +Y+EA+   DK I ++ +F +    +   +  +      ER +++
Sbjct: 210 DSYWSNKGDALCNLEKYDEAIGCYDKAIEISTDFDMYWNNKGNALCNL------ERYDEA 263

Query: 231 LKEFRNFVDTHSNVVEACTLFAQVLVDQEDFDGAEEYFNRSIRVDPENASLYVHRAMLML 290
           ++ +   ++   +    C      L + E +D A E ++++I +DP+ +S Y +     L
Sbjct: 264 IECYDKAIEIDPDFSSYCNNKGDALCNLEKYDEAIECYDKAIEIDPDFSS-YCNNKGDAL 322

Query: 291 QARGNVDEAIKLIEKAISIDKSCMFAYETLGTIEVQRGRLEEAVKCFNKALPLARDEAEL 350
                 +EAI+  +KAI +       +   G       +  +A++C++KA+ +   + + 
Sbjct: 323 CNLERYNEAIECYDKAIEMSTDFDMYWNNKGNAHFNLEKYNKAIECYDKAIEI---DPDF 379

Query: 351 SHIYSLRDAAIAQMK----VCERYNIKKKVSPRSQNITKNEKLAIKQLRENNDIIIRPAD 406
           S   + +  A+  ++      E Y+   ++ P   +   N+  A+  L E +D  I   D
Sbjct: 380 SSYCNNKGDALCNLEKYDEAIECYDKAIEIDPDFSSYWGNKGDALCNL-ERHDEAIECYD 438

Query: 407 KGGKTVVMDKADYTQ-KMTSILNSNDYEIIPGDPTKTIEESEKYGNLENESGQK-HAASD 464
           K  + +  D   Y   K  ++ N   Y        KT+E    + +  N  G   +    
Sbjct: 439 KALE-ISTDFGMYCNNKGNALCNLERYNEAIECYDKTLEIYPDFSSCWNNKGNALYYLER 497

Query: 465 FTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALN 513
           + +A    D+A ++DPN  D++Y    I+   G  EEAL  L K+I L+
Sbjct: 498 YNEAIECYDKALEMDPNDDDAWYASASIFSKNGNKEEALYRLAKSIELD 546



 Score = 60.5 bits (145), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 45/194 (23%), Positives = 92/194 (47%), Gaps = 7/194 (3%)

Query: 153 FTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQRH 212
           + +A    D+A ++DP+ +     +G   C   +Y+EA+   DK I ++P+F        
Sbjct: 260 YDEAIECYDKAIEIDPDFSSYCNNKGDALCNLEKYDEAIECYDKAIEIDPDFS------S 313

Query: 213 FVVHKMIVPGDRERVEQSLKEFRNFVDTHSNVVEACTLFAQVLVDQEDFDGAEEYFNRSI 272
           +  +K     + ER  ++++ +   ++  ++             + E ++ A E ++++I
Sbjct: 314 YCNNKGDALCNLERYNEAIECYDKAIEMSTDFDMYWNNKGNAHFNLEKYNKAIECYDKAI 373

Query: 273 RVDPENASLYVHRAMLMLQARGNVDEAIKLIEKAISIDKSCMFAYETLGTIEVQRGRLEE 332
            +DP+ +S Y +     L      DEAI+  +KAI ID      +   G       R +E
Sbjct: 374 EIDPDFSS-YCNNKGDALCNLEKYDEAIECYDKAIEIDPDFSSYWGNKGDALCNLERHDE 432

Query: 333 AVKCFNKALPLARD 346
           A++C++KAL ++ D
Sbjct: 433 AIECYDKALEISTD 446



 Score = 53.1 bits (126), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 42/192 (21%), Positives = 93/192 (48%), Gaps = 9/192 (4%)

Query: 153 FTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQRH 212
           + KA    D+A ++DP+ +     +G   C   +Y+EA+   DK I ++P+F      + 
Sbjct: 362 YNKAIECYDKAIEIDPDFSSYCNNKGDALCNLEKYDEAIECYDKAIEIDPDFSSYWGNKG 421

Query: 213 FVVHKMIVPGDRERVEQSLKEFRNFVDTHSNVVEACTLFAQVLVDQEDFDGAEEYFNRSI 272
             +  +      ER +++++ +   ++  ++    C      L + E ++ A E +++++
Sbjct: 422 DALCNL------ERHDEAIECYDKALEISTDFGMYCNNKGNALCNLERYNEAIECYDKTL 475

Query: 273 RVDPENASLYVHRA-MLMLQARGNVDEAIKLIEKAISIDKSCMFAYETLGTIEVQRGRLE 331
            + P+ +S + ++   L    R N  EAI+  +KA+ +D +   A+    +I  + G  E
Sbjct: 476 EIYPDFSSCWNNKGNALYYLERYN--EAIECYDKALEMDPNDDDAWYASASIFSKNGNKE 533

Query: 332 EAVKCFNKALPL 343
           EA+    K++ L
Sbjct: 534 EALYRLAKSIEL 545



 Score = 51.6 bits (122), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 54/256 (21%), Positives = 102/256 (39%), Gaps = 44/256 (17%)

Query: 266 EYFNRSIRVDPENASLYVHRAMLMLQARGNVDEAIKLIEKAISIDKSCMFAYETLGTIEV 325
           +Y+ +++  +P+N S + ++   +       DEAI   +KAI I       +   G    
Sbjct: 197 DYYTKALEHNPDNDSYWSNKGDALCNLEK-YDEAIGCYDKAIEISTDFDMYWNNKGNALC 255

Query: 326 QRGRLEEAVKCFNKALPLARDEAELSHIYSLRDAAIAQMK----VCERYNIKKKVSPRSQ 381
              R +EA++C++KA+ +   + + S   + +  A+  ++      E Y+   ++ P   
Sbjct: 256 NLERYDEAIECYDKAIEI---DPDFSSYCNNKGDALCNLEKYDEAIECYDKAIEIDPDFS 312

Query: 382 NITKNEKLAIKQLRENNDIIIRPADKGGKTVVMDKADYTQKMTSILNSNDYEIIPGDPTK 441
           +   N+  A+  L   N+ I             DKA                        
Sbjct: 313 SYCNNKGDALCNLERYNEAI----------ECYDKA------------------------ 338

Query: 442 TIEESEKYGNLENESGQKH-AASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYE 500
            IE S  +    N  G  H     + KA    D+A ++DP+ +     +G   C   +Y+
Sbjct: 339 -IEMSTDFDMYWNNKGNAHFNLEKYNKAIECYDKAIEIDPDFSSYCNNKGDALCNLEKYD 397

Query: 501 EALRNLDKTIALNPNF 516
           EA+   DK I ++P+F
Sbjct: 398 EAIECYDKAIEIDPDF 413



 Score = 44.7 bits (104), Expect = 0.14,   Method: Compositional matrix adjust.
 Identities = 40/199 (20%), Positives = 92/199 (46%), Gaps = 14/199 (7%)

Query: 115 TKAIEDLTQLVEDTSVDPKIKVNAHIK-RAVVHLHAASDFTKAFADLDEAEKVDPNVADS 173
            KAIE   + +E   +DP      + K  A+ +L     + +A    D+A ++DP+ +  
Sbjct: 363 NKAIECYDKAIE---IDPDFSSYCNNKGDALCNLEK---YDEAIECYDKAIEIDPDFSSY 416

Query: 174 YYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQRHFVVHKMIVPGDRERVEQSLKE 233
           +  +G   C   +++EA+   DK + ++ +F +      +  +K     + ER  ++++ 
Sbjct: 417 WGNKGDALCNLERHDEAIECYDKALEISTDFGM------YCNNKGNALCNLERYNEAIEC 470

Query: 234 FRNFVDTHSNVVEACTLFAQVLVDQEDFDGAEEYFNRSIRVDPENASLYVHRAMLMLQAR 293
           +   ++ + +           L   E ++ A E +++++ +DP +   +   A +     
Sbjct: 471 YDKTLEIYPDFSSCWNNKGNALYYLERYNEAIECYDKALEMDPNDDDAWYASASI-FSKN 529

Query: 294 GNVDEAIKLIEKAISIDKS 312
           GN +EA+  + K+I +D S
Sbjct: 530 GNKEEALYRLAKSIELDDS 548


>gi|359464250|ref|ZP_09252813.1| TPR domain-containing protein [Acaryochloris sp. CCMEE 5410]
          Length = 1345

 Score = 69.3 bits (168), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 104/470 (22%), Positives = 181/470 (38%), Gaps = 108/470 (22%)

Query: 119  EDLTQLVEDTSVDPKIKVNAHIKRAVVHLHAASDFTK----AFADLDEAEKVDPNVADSY 174
            E LT L +   +DP + + A+  R V +      F K    A ADL +A  +D     +Y
Sbjct: 704  ETLTALNQAIEIDPNMAI-AYTNRGVTY-----SFLKRPKEAIADLKKAIALDSQYISAY 757

Query: 175  YQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQRHFVVHKMIVPGDRERVEQSLKEF 234
               G +Y   G+Y+EAL   ++ IA++P   +  + + FV                 K++
Sbjct: 758  GGLGMLYHSQGRYQEALAQFNQGIAIDPKNPINYSGQGFVYFAQ-------------KQY 804

Query: 235  RNFVDTHSNVVE-----ACTLF--AQVLVDQEDFDGAEEYFNRSIRVDPENASLYVHRAM 287
            +  +  H+  +E     A   F  A V +  + +  A     ++I++ P +  +Y +   
Sbjct: 805  QAAIAAHTQAIELEPDSANDYFSRANVYITTQQYQPAIADLTKAIQLAPPD-PIYFNNRG 863

Query: 288  LMLQARGNVDEAIKLIEKAISIDKSCMFAYETLGTIEVQRGRLEEAVKCFNKALPLA--- 344
                A    + A+    +AI++DK+   AY  LGT+  +  + + A+  F++A+ +A   
Sbjct: 864  DAYAALNQPEAALADYSQAIAVDKNNTRAYIGLGTVYQRTRQYQRAIAQFDQAIEVADFP 923

Query: 345  ----RDEAELSHIYSLRDAAIAQMKVCER----YNIKKKVSPRSQNITKNEKLAIKQLRE 396
                 D+      YS R    + +   E+    ++   ++SP+   + +   L    L  
Sbjct: 924  QQLETDKKYKGLAYSARGFLYSDLGKLEQAIADFSQAIELSPKVTYLYRARALNYTALNR 983

Query: 397  NNDIIIRPADKGGKTVVMDKADYTQKMTSILNSNDYEIIPGDPTKTIEESEKYGNLENES 456
              + I               ADYTQ +         EI P D +  I+  + Y  L  E+
Sbjct: 984  YQEAI---------------ADYTQAI---------EIAPKDLSTYIQRGKVYRTLGQEA 1019

Query: 457  GQKHAASDFTK---------------------------AFADLDEAEKVDPNVADS---- 485
                A +DF K                           A AD  +A K+ P         
Sbjct: 1020 ---EANADFQKVLQTEPSDSQGYEARADVYKSLKRYPEALADYTQAIKLAPQTPLQRSLL 1076

Query: 486  YYQRGQIYCLFGQYEEALRNLDKTIALNPN--------FHVARAQRHFVW 527
            +  R Q+Y    QYE+A  +  K +AL PN         ++AR      W
Sbjct: 1077 HSSRAQMYGNLQQYEQANSDYSKALALLPNPTVPFAADLYIARGNNSLNW 1126



 Score = 67.8 bits (164), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 94/432 (21%), Positives = 175/432 (40%), Gaps = 89/432 (20%)

Query: 139  HIKRAVVHLHAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTI 198
            +I R  V L     + +    L++A ++DPN+A +Y  RG  Y    + +EA+ +L K I
Sbjct: 689  YINRGWV-LIKMDRYEETLTALNQAIEIDPNMAIAYTNRGVTYSFLKRPKEAIADLKKAI 747

Query: 199  ALNPNFHVARAQRHFVVHKMIVPGDRERVEQSLKEFRN--FVDTHSNVVEACTLFAQVLV 256
            AL+  +  A      + H       + R +++L +F     +D  + +  +   F  V  
Sbjct: 748  ALDSQYISAYGGLGMLYH------SQGRYQEALAQFNQGIAIDPKNPINYSGQGF--VYF 799

Query: 257  DQEDFDGAEEYFNRSIRVDPENASLYVHRAMLMLQ------ARGNVDEAIKLI------- 303
             Q+ +  A     ++I ++P++A+ Y  RA + +       A  ++ +AI+L        
Sbjct: 800  AQKQYQAAIAAHTQAIELEPDSANDYFSRANVYITTQQYQPAIADLTKAIQLAPPDPIYF 859

Query: 304  --------------------EKAISIDKSCMFAYETLGTIEVQRGRLEEAVKCFNKALPL 343
                                 +AI++DK+   AY  LGT+  +  + + A+  F++A+ +
Sbjct: 860  NNRGDAYAALNQPEAALADYSQAIAVDKNNTRAYIGLGTVYQRTRQYQRAIAQFDQAIEV 919

Query: 344  A-------RDEAELSHIYSLRDAAIAQMKVCER----YNIKKKVSPRSQNITKNEKLAIK 392
            A        D+      YS R    + +   E+    ++   ++SP+   + +   L   
Sbjct: 920  ADFPQQLETDKKYKGLAYSARGFLYSDLGKLEQAIADFSQAIELSPKVTYLYRARALNYT 979

Query: 393  QLRENNDIIIRPADKGGKTVVMDKADYTQKMTSILNSNDYEIIPGDPTKTIEESEKYGNL 452
             L    + I               ADYTQ +         EI P D +  I+  + Y  L
Sbjct: 980  ALNRYQEAI---------------ADYTQAI---------EIAPKDLSTYIQRGKVYRTL 1015

Query: 453  ENESGQKHAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIAL 512
              E+    A +DF K         + +P+ +  Y  R  +Y    +Y EAL +  + I L
Sbjct: 1016 GQEA---EANADFQKVL-------QTEPSDSQGYEARADVYKSLKRYPEALADYTQAIKL 1065

Query: 513  NPNFHVARAQRH 524
             P   + R+  H
Sbjct: 1066 APQTPLQRSLLH 1077



 Score = 56.2 bits (134), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 109/475 (22%), Positives = 185/475 (38%), Gaps = 60/475 (12%)

Query: 72   FEHEDYLTAIRHCTE--EIESTSSNHTKALARLLRATVYIFTSQSTKAIEDLTQLVEDTS 129
            F  + Y  AI   T+  E+E  S+N         RA VYI T Q   AI DLT+ ++   
Sbjct: 799  FAQKQYQAAIAAHTQAIELEPDSAND-----YFSRANVYITTQQYQPAIADLTKAIQLAP 853

Query: 130  VDPKIKVNAHIKRAVVHLHAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEE 189
             DP    N     A ++   A     A AD  +A  VD N   +Y   G +Y    QY+ 
Sbjct: 854  PDPIYFNNRGDAYAALNQPEA-----ALADYSQAIAVDKNNTRAYIGLGTVYQRTRQYQR 908

Query: 190  ALRNLDKTIALNPNF-----------HVARAQRHFVVHKMIVPGDRERVEQSLKEFRNFV 238
            A+   D+ I +  +F            +A + R F+        D  ++EQ++ +F   +
Sbjct: 909  AIAQFDQAIEVA-DFPQQLETDKKYKGLAYSARGFLYS------DLGKLEQAIADFSQAI 961

Query: 239  DTHSNVVEACTLFAQVLVDQEDFDGAEEYFNRSIRVDPENASLYVHRAMLMLQARGNVDE 298
            +    V       A        +  A   + ++I + P++ S Y+ R  +  +  G   E
Sbjct: 962  ELSPKVTYLYRARALNYTALNRYQEAIADYTQAIEIAPKDLSTYIQRGKVY-RTLGQEAE 1020

Query: 299  AIKLIEKAISIDKSCMFAYETLGTIEVQRGRLEEAVKCFNKALPLA-RDEAELSHIYSLR 357
            A    +K +  + S    YE    +     R  EA+  + +A+ LA +   + S ++S R
Sbjct: 1021 ANADFQKVLQTEPSDSQGYEARADVYKSLKRYPEALADYTQAIKLAPQTPLQRSLLHSSR 1080

Query: 358  DAAIAQMKVCERYN---------IKKKVSPRSQNI---TKNEKLAIKQLRE-----NNDI 400
                  ++  E+ N         +     P + ++     N  L  ++  +     N  I
Sbjct: 1081 AQMYGNLQQYEQANSDYSKALALLPNPTVPFAADLYIARGNNSLNWQRQEDALADFNQAI 1140

Query: 401  IIRPADKGGKTVVMDKADYTQKMTSILNSNDYEIIPGDPTKTIEESEKYGNLEN-ESGQK 459
             I P     K V+     Y  +    L +  Y+    D    I+ + K G + +  S   
Sbjct: 1141 NINP-----KNVMA----YVGRGRLSLGTQKYQDALADFNTVIKLNPKLGFVYDFRSRTY 1191

Query: 460  HAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNP 514
             A +    A  D D+  ++  N A SY +RG ++ L      AL +  + I LNP
Sbjct: 1192 QALNRIEDAITDADQWIELQANAA-SYTRRGILHVLGANPSLALNDFQQAITLNP 1245



 Score = 52.4 bits (124), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 67/302 (22%), Positives = 133/302 (44%), Gaps = 34/302 (11%)

Query: 69   KRAFEHEDYLTAIRHCTEEIESTSSNHTKALARLLRATVYIFTSQSTKAIEDLTQLVEDT 128
            +RA    D    +    +++E+      K LA   R  +Y    +  +AI D +Q +E  
Sbjct: 907  QRAIAQFDQAIEVADFPQQLET--DKKYKGLAYSARGFLYSDLGKLEQAIADFSQAIE-- 962

Query: 129  SVDPKIKVNAHIKRA-VVHLHAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQY 187
             + PK+    ++ RA  ++  A + + +A AD  +A ++ P    +Y QRG++Y   GQ 
Sbjct: 963  -LSPKV---TYLYRARALNYTALNRYQEAIADYTQAIEIAPKDLSTYIQRGKVYRTLGQE 1018

Query: 188  EEALRNLDKTIALNPN---FHVARAQRHFVVHKMIVPGDRERVEQSLKEFRNFVDTHSNV 244
             EA  +  K +   P+    + ARA     V+K +     +R  ++L ++   +      
Sbjct: 1019 AEANADFQKVLQTEPSDSQGYEARAD----VYKSL-----KRYPEALADYTQAIKLAPQT 1069

Query: 245  VEACTLF----AQVLVDQEDFDGAEEYFNRSIRVDPEN-----ASLYVHRAMLMLQARGN 295
                +L     AQ+  + + ++ A   +++++ + P       A LY+ R    L  +  
Sbjct: 1070 PLQRSLLHSSRAQMYGNLQQYEQANSDYSKALALLPNPTVPFAADLYIARGNNSLNWQRQ 1129

Query: 296  VDEAIKLIEKAISIDKSCMFAYETLGTIEVQRGRLEEAVKCFNKALPLARDEAELSHIYS 355
             D A+    +AI+I+   + AY   G + +   + ++A+  FN  + L     +L  +Y 
Sbjct: 1130 ED-ALADFNQAININPKNVMAYVGRGRLSLGTQKYQDALADFNTVIKL---NPKLGFVYD 1185

Query: 356  LR 357
             R
Sbjct: 1186 FR 1187



 Score = 49.7 bits (117), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 55/233 (23%), Positives = 94/233 (40%), Gaps = 63/233 (27%)

Query: 171 ADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNF-HVA--------RAQRHFVVHKMIV- 220
           A+ + +RG       QY EAL   D+ I LNP+F H+A        R+Q +F   +M + 
Sbjct: 550 AEVWIERGNQLWRLEQYAEALAAFDRAIQLNPSFVHLAWYGKALVYRSQENFPAAEMALR 609

Query: 221 ----------PGDR---------ERVEQSLKEFRN---FVDTHSNVV------------- 245
                     PG +         ++ EQ+L    +      T + ++             
Sbjct: 610 KVLTLKPNYKPGWKVLSAVYRLQKKPEQALTAVNSGLKIAPTDAQLLNEKYVVLSVLYRY 669

Query: 246 -EACTLF----------------AQVLVDQEDFDGAEEYFNRSIRVDPENASLYVHRAML 288
            EA T                    VL+  + ++      N++I +DP  A  Y +R + 
Sbjct: 670 PEALTAIDAAIAQAPRAAFYINRGWVLIKMDRYEETLTALNQAIEIDPNMAIAYTNRGVT 729

Query: 289 MLQARGNVDEAIKLIEKAISIDKSCMFAYETLGTIEVQRGRLEEAVKCFNKAL 341
               +    EAI  ++KAI++D   + AY  LG +   +GR +EA+  FN+ +
Sbjct: 730 YSFLK-RPKEAIADLKKAIALDSQYISAYGGLGMLYHSQGRYQEALAQFNQGI 781


>gi|300868979|ref|ZP_07113583.1| conserved hypothetical protein [Oscillatoria sp. PCC 6506]
 gi|300333046|emb|CBN58775.1| conserved hypothetical protein [Oscillatoria sp. PCC 6506]
          Length = 328

 Score = 69.3 bits (168), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 51/208 (24%), Positives = 95/208 (45%), Gaps = 7/208 (3%)

Query: 145 VHLHAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNF 204
           V L    DF  A A  D+A  + P+  +++Y RG      G++E A+ + DK + + P++
Sbjct: 116 VALGKFGDFEDAIASFDKALAIQPDYHEAWYNRGVALGKLGRFEGAIASYDKALVIKPDY 175

Query: 205 HVARAQRHFVVHKMIVPGDRERVEQSLKEFRNFVDTHSNVVEACTLFAQVLVDQEDFDGA 264
           H A   R   + K+       + E ++  +   ++   +  EA       L +   F+ A
Sbjct: 176 HEAWYNRGMALGKL------GQFEGAIAAYDKAIELKIDKHEAWNNRGIALKNLGRFEDA 229

Query: 265 EEYFNRSIRVDPENASLYVHRAMLMLQARGNVDEAIKLIEKAISIDKSCMFAYETLGTIE 324
              ++R+I +  +    +++R  + L +    ++AI   +KA++I      A+   G   
Sbjct: 230 IASYDRAIELKIDKHEAWINRG-IALNSLERFEDAIASFDKALAIKPDYHEAWNNRGVAL 288

Query: 325 VQRGRLEEAVKCFNKALPLARDEAELSH 352
            Q G LE A+  F+KAL +  D  E  H
Sbjct: 289 RQLGDLEGAIASFDKALVIKPDYQEAWH 316



 Score = 66.2 bits (160), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 56/246 (22%), Positives = 109/246 (44%), Gaps = 14/246 (5%)

Query: 153 FTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQRH 212
             +A A  D++  + P+  +++Y RG     FG +E+A+ + DK +A+ P++H A   R 
Sbjct: 90  LGEAIASFDKSLAIQPDYHEAWYNRGVALGKFGDFEDAIASFDKALAIQPDYHEAWYNRG 149

Query: 213 FVVHKMIVPGDRERVEQSLKEFRNFVDTHSNVVEACTLFAQVLVDQEDFDGAEEYFNRSI 272
             + K+       R E ++  +   +    +  EA       L     F+GA   ++++I
Sbjct: 150 VALGKL------GRFEGAIASYDKALVIKPDYHEAWYNRGMALGKLGQFEGAIAAYDKAI 203

Query: 273 RVDPENASLYVHRAMLMLQARGNVDEAIKLIEKAISIDKSCMFAYETLGTIEVQRGRLEE 332
            +  +    + +R  + L+  G  ++AI   ++AI +      A+   G       R E+
Sbjct: 204 ELKIDKHEAWNNRG-IALKNLGRFEDAIASYDRAIELKIDKHEAWINRGIALNSLERFED 262

Query: 333 AVKCFNKALPLARDEAELSHIYSLRDAAIAQMKVCE----RYNIKKKVSPRSQNITKNEK 388
           A+  F+KAL +  D  E    ++ R  A+ Q+   E     ++    + P  Q    N  
Sbjct: 263 AIASFDKALAIKPDYHE---AWNNRGVALRQLGDLEGAIASFDKALVIKPDYQEAWHNRS 319

Query: 389 LAIKQL 394
           +AI +L
Sbjct: 320 MAISEL 325



 Score = 65.1 bits (157), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 77/374 (20%), Positives = 136/374 (36%), Gaps = 76/374 (20%)

Query: 151 SDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQ 210
            DF  A A   +A  + P+    +Y  G+     GQY+EA+   DK I   P+ + A   
Sbjct: 20  GDFEGAIAFYKKAIGIQPDFYKVWYNWGEALYELGQYKEAIAAYDKGIEFKPDLYQAWYS 79

Query: 211 RHFVVHKMIVPGDRERVEQSLKEFRNFVDTHSNVVEACTLFAQVLVDQEDFDGAEEYFNR 270
           R  V++++   G                       EA   F + L  Q D+   E ++NR
Sbjct: 80  RGNVLYRLRRLG-----------------------EAIASFDKSLAIQPDYH--EAWYNR 114

Query: 271 SIRVDPENASLYVHRAMLMLQARGNVDEAIKLIEKAISIDKSCMFAYETLGTIEVQRGRL 330
            +                 L   G+ ++AI   +KA++I      A+   G    + GR 
Sbjct: 115 GV----------------ALGKFGDFEDAIASFDKALAIQPDYHEAWYNRGVALGKLGRF 158

Query: 331 EEAVKCFNKALPLARDEAELSHIYSLRDAAIAQMK-VCERYNIKKKVSPRSQNITKNEKL 389
           E A+  ++KAL +  D  E  +   +    + Q +     Y+   ++         N  +
Sbjct: 159 EGAIASYDKALVIKPDYHEAWYNRGMALGKLGQFEGAIAAYDKAIELKIDKHEAWNNRGI 218

Query: 390 AIKQLRENNDIIIRPADKGGKTVVMDKADYTQKMTSILNSNDYEIIPGDPTKTIEESEKY 449
           A+K L    D I               A Y + +   ++ ++  I  G    ++E     
Sbjct: 219 ALKNLGRFEDAI---------------ASYDRAIELKIDKHEAWINRGIALNSLER---- 259

Query: 450 GNLENESGQKHAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKT 509
                          F  A A  D+A  + P+  +++  RG      G  E A+ + DK 
Sbjct: 260 ---------------FEDAIASFDKALAIKPDYHEAWNNRGVALRQLGDLEGAIASFDKA 304

Query: 510 IALNPNFHVARAQR 523
           + + P++  A   R
Sbjct: 305 LVIKPDYQEAWHNR 318



 Score = 64.7 bits (156), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 56/252 (22%), Positives = 110/252 (43%), Gaps = 14/252 (5%)

Query: 147 LHAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHV 206
           L+    + +A A  D+  +  P++  ++Y RG +     +  EA+ + DK++A+ P++H 
Sbjct: 50  LYELGQYKEAIAAYDKGIEFKPDLYQAWYSRGNVLYRLRRLGEAIASFDKSLAIQPDYHE 109

Query: 207 ARAQRHFVVHKMIVPGDRERVEQSLKEFRNFVDTHSNVVEACTLFAQVLVDQEDFDGAEE 266
           A   R   + K    GD    E ++  F   +    +  EA       L     F+GA  
Sbjct: 110 AWYNRGVALGKF---GD---FEDAIASFDKALAIQPDYHEAWYNRGVALGKLGRFEGAIA 163

Query: 267 YFNRSIRVDPENASLYVHRAMLMLQARGNVDEAIKLIEKAISIDKSCMFAYETLGTIEVQ 326
            +++++ + P+    + +R M  L   G  + AI   +KAI +      A+   G     
Sbjct: 164 SYDKALVIKPDYHEAWYNRGM-ALGKLGQFEGAIAAYDKAIELKIDKHEAWNNRGIALKN 222

Query: 327 RGRLEEAVKCFNKALPLARDEAELSHIYSLRDAAIAQMKVCE----RYNIKKKVSPRSQN 382
            GR E+A+  +++A+ L  D+ E    +  R  A+  ++  E     ++    + P    
Sbjct: 223 LGRFEDAIASYDRAIELKIDKHE---AWINRGIALNSLERFEDAIASFDKALAIKPDYHE 279

Query: 383 ITKNEKLAIKQL 394
              N  +A++QL
Sbjct: 280 AWNNRGVALRQL 291


>gi|182417314|ref|ZP_02948653.1| putative tetratricopeptide repeat domain containing protein
           [Clostridium butyricum 5521]
 gi|237667079|ref|ZP_04527063.1| tetratricopeptide repeat domain protein [Clostridium butyricum E4
           str. BoNT E BL5262]
 gi|182378822|gb|EDT76341.1| putative tetratricopeptide repeat domain containing protein
           [Clostridium butyricum 5521]
 gi|237655427|gb|EEP52983.1| tetratricopeptide repeat domain protein [Clostridium butyricum E4
           str. BoNT E BL5262]
          Length = 986

 Score = 69.3 bits (168), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 104/497 (20%), Positives = 218/497 (43%), Gaps = 95/497 (19%)

Query: 72  FEHEDYLTAIRHCTEEIESTSSNHTKALARLLRATVYIFTSQSTKAIEDLTQLVE-DTSV 130
           +  + Y+ AI    +E++  + N+    A L     Y + +++ +A++   ++++ D+++
Sbjct: 129 YRMKQYIDAITFFEKELKINNKNYE---AILNIGYCYGYINKNKEAMKCFEKVIKLDSNL 185

Query: 131 DPKIKVNAHIKRAVVHLHAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEA 190
           +  +  +A+I +A + L   +   +A   LDE  KV+ +  ++++ +G I+      +E+
Sbjct: 186 EEYL--DAYISKASI-LRELNKSEQAIKCLDELLKVNSSSGEAFFYKGLIFNEQNNIKES 242

Query: 191 LRNLDKTIALNPNFHVARAQRHFVVHKMIVPGDRERVEQSLKEFRNFVDTHS----NVVE 246
           ++ LDK I L  N               ++  + ++ + +++  +  +D H     N++ 
Sbjct: 243 IKCLDKIIELGSN---------------VIFRENKQAQMNIENMQ--MDNHGILVPNIIN 285

Query: 247 ACTLFAQVLVDQE-DFDGAEEYFNRSIRVDPENASLYVHRAMLMLQARGNVDEAIKLIEK 305
           A  + A +L ++  D D A E F ++ ++D +N    +H A ++L   G V+E++K+ + 
Sbjct: 286 AYLIKATILEEKMLDLDKALECFKQAKKIDDKNTYANIHIA-IVLDKLGRVEESLKVFDF 344

Query: 306 AISIDKS-----C----------------MF------------AYETLGTIEVQRGRLEE 332
            I+ DKS     C                +F            AY   G      G +EE
Sbjct: 345 VIANDKSIEGIYCKGFVMLKRENYIESIDLFNKVIARDDKNIDAYINKGIALKNVGNIEE 404

Query: 333 AVKCFNKALPLARDEAELSHIYSLRDAAIAQMKVCERYNIKKKVSPRSQNITKNEKLAIK 392
           A+KCF KA+ L   + + ++ Y L+   + +   CE  NIK+ +   ++ I  N K    
Sbjct: 405 AIKCFEKAIYL---DDKFAYAYFLKGTTLFENNCCE--NIKEILECINKAIELNSKYFEA 459

Query: 393 QLRENNDIIIRPADKGGKTVVMDKADYTQKMTSILNSNDYEIIPGDPTKTIEESEKYGNL 452
                            K +++D  +   +  SIL             +++  ++K   +
Sbjct: 460 YF--------------NKAIILDSIERYSEAISIL------------KESLSFTDKKEQV 493

Query: 453 ENESGQKHA-ASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIA 511
             + G  +   +D  K+    D+A  +D N  ++YY +G I    G+  EAL+  ++ I 
Sbjct: 494 YLQLGATYCHMNDNKKSIECFDKAISLDSNYVEAYYNKGIILFSQGELNEALQCFNEIIE 553

Query: 512 LNPNFHVARAQRHFVWT 528
            N  +     +R  V T
Sbjct: 554 KNDKYIEVYLERASVLT 570



 Score = 68.9 bits (167), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 92/384 (23%), Positives = 164/384 (42%), Gaps = 30/384 (7%)

Query: 168 PNVADSYYQRGQIYCLFGQYEEALRNLDKTI-ALNPNFHVARAQRHFVVHKMIVPGDRER 226
           PN+ ++Y  +  I       EE + +LDK +        +     +  +H  IV     R
Sbjct: 281 PNIINAYLIKATIL------EEKMLDLDKALECFKQAKKIDDKNTYANIHIAIVLDKLGR 334

Query: 227 VEQSLKEFRNFVDTHSNVVEACTLFAQVLVDQEDFDGAEEYFNRSIRVDPENASLYVHRA 286
           VE+SLK F +FV  +   +E       V++ +E++  + + FN+ I  D +N   Y+++ 
Sbjct: 335 VEESLKVF-DFVIANDKSIEGIYCKGFVMLKRENYIESIDLFNKVIARDDKNIDAYINKG 393

Query: 287 MLMLQARGNVDEAIKLIEKAISIDKSCMFAYETLGTIEVQRG---RLEEAVKCFNKALPL 343
            + L+  GN++EAIK  EKAI +D    +AY   GT   +      ++E ++C NKA+ L
Sbjct: 394 -IALKNVGNIEEAIKCFEKAIYLDDKFAYAYFLKGTTLFENNCCENIKEILECINKAIEL 452

Query: 344 ARDEAELSHIYSLRDAAIAQMKVCERYNIKKKVSPRSQNITKNEKLAIKQL------REN 397
                E     +  + AI  +   ERY+    +   S + T  ++    QL        +
Sbjct: 453 NSKYFE-----AYFNKAII-LDSIERYSEAISILKESLSFTDKKEQVYLQLGATYCHMND 506

Query: 398 NDIIIRPADKGGKTVVMDKADYTQKMTSILNSNDYEIIPGDPTKTIEESEKYGNLENESG 457
           N   I   DK           Y  K   + +  +         + IE+++KY  +  E  
Sbjct: 507 NKKSIECFDKAISLDSNYVEAYYNKGIILFSQGELNEALQCFNEIIEKNDKYIEVYLERA 566

Query: 458 QKHAA-SDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNF 516
                   F +A    ++  ++D N  D+YY+R  I     + +EA+ ++ K I +N   
Sbjct: 567 SVLTILGRFNEAVESCEKVIQIDDNNDDAYYKRTIILSALKKDDEAIESIKKAIQIND-- 624

Query: 517 HVARAQRHFVWTSTLAELMAFSDE 540
              +   +F+  + L  L   S E
Sbjct: 625 ---KQYTYFITYALLLNLKGKSKE 645



 Score = 57.0 bits (136), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 59/251 (23%), Positives = 116/251 (46%), Gaps = 19/251 (7%)

Query: 98  ALARLLRATVYIFTSQSTKAIEDLTQLVEDTSVDPKIKVN-----AHIKRAVVHLHAASD 152
           A A  L+ T    T       E++ +++E   ++  I++N     A+  +A++ L +   
Sbjct: 420 AYAYFLKGT----TLFENNCCENIKEILE--CINKAIELNSKYFEAYFNKAII-LDSIER 472

Query: 153 FTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQRH 212
           +++A + L E+          Y Q G  YC     ++++   DK I+L+ N+  A     
Sbjct: 473 YSEAISILKESLSFTDKKEQVYLQLGATYCHMNDNKKSIECFDKAISLDSNYVEA----- 527

Query: 213 FVVHKMIVPGDRERVEQSLKEFRNFVDTHSNVVEACTLFAQVLVDQEDFDGAEEYFNRSI 272
              +K I+   +  + ++L+ F   ++ +   +E     A VL     F+ A E   + I
Sbjct: 528 -YYNKGIILFSQGELNEALQCFNEIIEKNDKYIEVYLERASVLTILGRFNEAVESCEKVI 586

Query: 273 RVDPENASLYVHRAMLMLQARGNVDEAIKLIEKAISIDKSCMFAYETLGTIEVQRGRLEE 332
           ++D  N   Y  R ++ L A    DEAI+ I+KAI I+      + T   +   +G+ +E
Sbjct: 587 QIDDNNDDAYYKRTII-LSALKKDDEAIESIKKAIQINDKQYTYFITYALLLNLKGKSKE 645

Query: 333 AVKCFNKALPL 343
           A+K ++ A+ +
Sbjct: 646 ALKQYSYAIKI 656


>gi|225619724|ref|YP_002720981.1| TPR domain-containing protein [Brachyspira hyodysenteriae WA1]
 gi|225214543|gb|ACN83277.1| TPR domain-containing protein [Brachyspira hyodysenteriae WA1]
          Length = 424

 Score = 68.9 bits (167), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 84/376 (22%), Positives = 162/376 (43%), Gaps = 49/376 (13%)

Query: 153 FTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQRH 212
           +  A  D D+  ++ P  + +Y  RG      G YEEA++++DK I L+ N   A   R 
Sbjct: 84  YEAAINDYDKVIELVPTHSKAYDDRGYAKGNLGYYEEAIKDIDKAIVLDSNNIDAYIDRA 143

Query: 213 FVVHKMIVPGDRERVEQSLKEFRNFVDTHSNVVEACTLFAQVLVDQEDFDGAEEYFNRSI 272
           F+  K++     ++  +++++++  ++     V A             ++ A  Y+N+ I
Sbjct: 144 FI--KLM----SKKYIEAIEDYKKVLELDDTEVYAYNGIGDAKRSIGLYEEAISYYNKVI 197

Query: 273 RVDPENASL-YVHRAMLMLQARGNVDEAIKLIEKAISIDKSCMFAYETLGTIEVQRGRLE 331
            +   N+S  Y +R    +   G  +EAI  I KA+ I      AY   GT +      +
Sbjct: 198 EISNSNSSYAYNNRGACKI-GLGLYNEAIIDINKALEIYDEYTDAYNNRGTAKYNLELYK 256

Query: 332 EAVKCFNKALPLARDEAELSHIYSLRDAAIAQMKV----CERYNIKKKVSPRSQNITKNE 387
           EA++ F+KA+ L+    +  + Y+ R  + + + +     E +NI   + P+  +   N 
Sbjct: 257 EAIEDFDKAIELS---PQYFYAYNNRGNSKSALGLYEDAIEDFNIAINIEPKYIDAYYNR 313

Query: 388 KLAIKQLRENNDIIIRPADKGGKTVVMDKADYTQKMTSILNSNDYEIIPGDPTKTIEESE 447
            +A   +  +N+ I                             DY+I+    +  I    
Sbjct: 314 AVAKNNMGLHNEAI----------------------------KDYDIVIELDSNHINA-- 343

Query: 448 KYGNLENESGQKHAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLD 507
                 N +   +  SD+ +A  + D+  +++P  A++Y  RG      G YEEAL++ D
Sbjct: 344 ----YYNRALSYYNLSDYEEAIKNYDKVIELNPKSAEAYNNRGFAKYSIGLYEEALKDYD 399

Query: 508 KTIALNPNFHVARAQR 523
           K I ++ N+  A+  +
Sbjct: 400 KAIEIDSNYEKAKNNK 415



 Score = 60.8 bits (146), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 87/391 (22%), Positives = 156/391 (39%), Gaps = 55/391 (14%)

Query: 145 VHLHAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNF 204
           + L   + F KA A   +A + D N ++ Y   G      G YEEA+    K I ++ N+
Sbjct: 8   LQLFRETQFEKAAALFIKALEEDRNNSEIYNYLGITKQALGFYEEAINYYSKGIEIDENY 67

Query: 205 HVARAQRHFVVHKMIVPGDRERVEQSLKEFRNFVDTHSNVVEACTLFAQVLVDQEDFDGA 264
               A+ ++         +R   E +L  +   ++ +  V+E     ++   D+    G 
Sbjct: 68  ----AELYY---------NRANCESNLGLYEAAINDYDKVIELVPTHSKAYDDRGYAKGN 114

Query: 265 EEYFNRSIR-------VDPENASLYVHRAMLMLQARGNVDEAIKLIEKAISIDKSCMFAY 317
             Y+  +I+       +D  N   Y+ RA + L ++  + EAI+  +K + +D + ++AY
Sbjct: 115 LGYYEEAIKDIDKAIVLDSNNIDAYIDRAFIKLMSKKYI-EAIEDYKKVLELDDTEVYAY 173

Query: 318 ETLGTIEVQRGRLEEAVKCFNKALPLARDEAELSHIYSLRDAAIAQMKVCERYNIKKKVS 377
             +G  +   G  EEA+  +NK + ++   +  S+ Y+ R A    + +           
Sbjct: 174 NGIGDAKRSIGLYEEAISYYNKVIEISNSNS--SYAYNNRGACKIGLGLYNE-------- 223

Query: 378 PRSQNITKNEKLAIKQLRENNDIIIRPADKGGKTVVMDKADYTQKMTSILNSNDYEIIPG 437
                       AI  + +  +I     D            Y  + T+  N   Y+    
Sbjct: 224 ------------AIIDINKALEIYDEYTDA-----------YNNRGTAKYNLELYKEAIE 260

Query: 438 DPTKTIEESEKYGNLENESGQ-KHAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLF 496
           D  K IE S +Y    N  G  K A   +  A  D + A  ++P   D+YY R       
Sbjct: 261 DFDKAIELSPQYFYAYNNRGNSKSALGLYEDAIEDFNIAINIEPKYIDAYYNRAVAKNNM 320

Query: 497 GQYEEALRNLDKTIALNPNFHVARAQRHFVW 527
           G + EA+++ D  I L+ N   A   R   +
Sbjct: 321 GLHNEAIKDYDIVIELDSNHINAYYNRALSY 351



 Score = 51.6 bits (122), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 41/135 (30%), Positives = 66/135 (48%), Gaps = 19/135 (14%)

Query: 117 AIEDLTQLVEDTSVDPKIKVNAHIKRAV----VHLHAASDFTKAFADLDEAEKVDPNVAD 172
           AIED    +   +++PK  ++A+  RAV    + LH      +A  D D   ++D N  +
Sbjct: 292 AIEDFNIAI---NIEPKY-IDAYYNRAVAKNNMGLH-----NEAIKDYDIVIELDSNHIN 342

Query: 173 SYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQRHFVVHKMIVPGDRERVEQSLK 232
           +YY R   Y     YEEA++N DK I LNP    A   R F  + + +       E++LK
Sbjct: 343 AYYNRALSYYNLSDYEEAIKNYDKVIELNPKSAEAYNNRGFAKYSIGL------YEEALK 396

Query: 233 EFRNFVDTHSNVVEA 247
           ++   ++  SN  +A
Sbjct: 397 DYDKAIEIDSNYEKA 411



 Score = 50.1 bits (118), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 86/354 (24%), Positives = 145/354 (40%), Gaps = 60/354 (16%)

Query: 227 VEQSLKEFRNFVDTHSNVVEACTLFAQVLVDQED-------FDGAEEYFNRSIRVDPENA 279
            +Q+L  +   ++ +S  +E    +A++  ++ +       ++ A   +++ I + P ++
Sbjct: 43  TKQALGFYEEAINYYSKGIEIDENYAELYYNRANCESNLGLYEAAINDYDKVIELVPTHS 102

Query: 280 SLYVHRAMLMLQARGNV---DEAIKLIEKAISIDKSCMFAYETLGTIEVQRGRLEEAVKC 336
             Y  R      A+GN+   +EAIK I+KAI +D + + AY     I++   +  EA++ 
Sbjct: 103 KAYDDRGY----AKGNLGYYEEAIKDIDKAIVLDSNNIDAYIDRAFIKLMSKKYIEAIED 158

Query: 337 FNKALPLARDEAELSHIYSLRDA--AIAQMK-VCERYNIKKKVSPRSQNITKNEKLAIK- 392
           + K L L  D+ E+     + DA  +I   +     YN   ++S  + +   N + A K 
Sbjct: 159 YKKVLEL--DDTEVYAYNGIGDAKRSIGLYEEAISYYNKVIEISNSNSSYAYNNRGACKI 216

Query: 393 QLRENNDIIIRPADKGGKTVVMDKAD--YTQKMTSILNSNDYEIIPGDPTKTIEESEKYG 450
            L   N+ II   D      + D+    Y  + T+  N   Y+    D  K IE S +Y 
Sbjct: 217 GLGLYNEAII---DINKALEIYDEYTDAYNNRGTAKYNLELYKEAIEDFDKAIELSPQYF 273

Query: 451 NLENESGQKHAA--------SDFT---------------------------KAFADLDEA 475
              N  G   +A         DF                            +A  D D  
Sbjct: 274 YAYNNRGNSKSALGLYEDAIEDFNIAINIEPKYIDAYYNRAVAKNNMGLHNEAIKDYDIV 333

Query: 476 EKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQRHFVWTS 529
            ++D N  ++YY R   Y     YEEA++N DK I LNP    A   R F   S
Sbjct: 334 IELDSNHINAYYNRALSYYNLSDYEEAIKNYDKVIELNPKSAEAYNNRGFAKYS 387



 Score = 47.4 bits (111), Expect = 0.018,   Method: Compositional matrix adjust.
 Identities = 25/83 (30%), Positives = 48/83 (57%), Gaps = 1/83 (1%)

Query: 136 VNAHIKRAVVHLHAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLD 195
           +NA+  RA+ + +  SD+ +A  + D+  +++P  A++Y  RG      G YEEAL++ D
Sbjct: 341 INAYYNRALSY-YNLSDYEEAIKNYDKVIELNPKSAEAYNNRGFAKYSIGLYEEALKDYD 399

Query: 196 KTIALNPNFHVARAQRHFVVHKM 218
           K I ++ N+  A+  +   + K+
Sbjct: 400 KAIEIDSNYEKAKNNKEEALKKL 422


>gi|392413167|ref|YP_006449774.1| tetratricopeptide repeat protein [Desulfomonile tiedjei DSM 6799]
 gi|390626303|gb|AFM27510.1| tetratricopeptide repeat protein [Desulfomonile tiedjei DSM 6799]
          Length = 546

 Score = 68.9 bits (167), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 83/373 (22%), Positives = 153/373 (41%), Gaps = 48/373 (12%)

Query: 155 KAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQRHFV 214
           +A A LD     +P    +   RG       +Y+ AL +    I L+P++  A   R  +
Sbjct: 56  QAVAILDGIMLKNPKEVSALVLRGWAKERQDEYDLALHDYTAAIDLDPDYGSAWEMRGRL 115

Query: 215 VHKMIVPGDRERVEQSLKEFRNFVDTHSNVVEACTLFAQVLVDQEDFDGAEEYFNRSIRV 274
           + +M      E  E +L++ +   +   +          +   ++D+DGA  YF++S ++
Sbjct: 116 LARM------EDHEGALRDLKRAAELQPHAAAIVASMGLMRFFEQDYDGARTYFDKSSQL 169

Query: 275 DPENASLYVHRAMLMLQARGNVDEAIKLIEKAISIDKSCMFAYETLGTIEVQRGRLEEAV 334
           DP+  S Y  R  + L+ + +   AI  ++K +        A    G   ++ G+ ++++
Sbjct: 170 DPKEESAYFGRTAIYLE-KNDFTSAIAEMDKLLQFQPQSAQALFRRGFAYLKSGQPQKSL 228

Query: 335 KCFNKALPLARDEAELSHIYSLR-DA--AIAQM-KVCERYNIKKKVSPRSQNITKNEKLA 390
           + F+KAL L   + E+  IY  R DA  AI  + K  + Y     + P    +  N+   
Sbjct: 229 EDFDKALEL---DPEMKEIYWYRADAHRAINALDKALKDYQKAASIDPEDSILLLNQ--- 282

Query: 391 IKQLRENNDIIIRPADKGGKTVVMDKADYTQKMTSILNSNDYEIIPGDPTKTIEESEKYG 450
                               T++M    Y + +  +  S   E  P +P      +  Y 
Sbjct: 283 -------------------ATILMMMGRYDEALEMLRQSILLE--PDNPLPYTNRALLYL 321

Query: 451 NLENESGQKHAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTI 510
              N  G          A  DL++A +V P+      +R  ++ +  + ++AL +LD  I
Sbjct: 322 GTGNYLG----------ALKDLNKALQVQPDDVWLLIKRAHVFKMIARGDKALADLDSVI 371

Query: 511 ALNPNFHVARAQR 523
            L+P  H AR  R
Sbjct: 372 ELDPENHEARLMR 384



 Score = 65.5 bits (158), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 50/187 (26%), Positives = 98/187 (52%), Gaps = 19/187 (10%)

Query: 128 TSVDPKIKVNAHIKRAVVHLHAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQY 187
           + +DPK + +A+  R  ++L   +DFT A A++D+  +  P  A + ++RG  Y   GQ 
Sbjct: 167 SQLDPK-EESAYFGRTAIYLEK-NDFTSAIAEMDKLLQFQPQSAQALFRRGFAYLKSGQP 224

Query: 188 EEALRNLDKTIALNPNF---HVARAQRHFVVHKMIVPGDRERVEQSLKEFRNF--VDTHS 242
           +++L + DK + L+P     +  RA  H  ++ +         +++LK+++    +D   
Sbjct: 225 QKSLEDFDKALELDPEMKEIYWYRADAHRAINAL---------DKALKDYQKAASIDPED 275

Query: 243 NVVEACTLFAQVLVDQEDFDGAEEYFNRSIRVDPENASLYVHRAMLMLQARGNVDEAIKL 302
           +++      A +L+    +D A E   +SI ++P+N   Y +RA+L L   GN   A+K 
Sbjct: 276 SILLLNQ--ATILMMMGRYDEALEMLRQSILLEPDNPLPYTNRALLYL-GTGNYLGALKD 332

Query: 303 IEKAISI 309
           + KA+ +
Sbjct: 333 LNKALQV 339



 Score = 60.5 bits (145), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 77/379 (20%), Positives = 160/379 (42%), Gaps = 38/379 (10%)

Query: 152 DFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQR 211
           D+  A    D++ ++DP    +Y+ R  IY     +  A+  +DK +   P    A  +R
Sbjct: 155 DYDGARTYFDKSSQLDPKEESAYFGRTAIYLEKNDFTSAIAEMDKLLQFQPQSAQALFRR 214

Query: 212 HFVVHKMIVPGDRERVEQSLKEFRNFVDTHSNVVEACTLFAQVLVDQEDFDGAEEYFNRS 271
            F   K   P      ++SL++F   ++    + E     A         D A + + ++
Sbjct: 215 GFAYLKSGQP------QKSLEDFDKALELDPEMKEIYWYRADAHRAINALDKALKDYQKA 268

Query: 272 IRVDPENASLYVHRAMLMLQARGNVDEAIKLIEKAISIDKSCMFAYETLGTIEVQRGRLE 331
             +DPE++ L +++A +++   G  DEA++++ ++I ++      Y     + +  G   
Sbjct: 269 ASIDPEDSILLLNQATILMMM-GRYDEALEMLRQSILLEPDNPLPYTNRALLYLGTGNYL 327

Query: 332 EAVKCFNKALPLARDEAEL----SHIYSL---RDAAIAQM-KVCERYNIKKKVSPRSQNI 383
            A+K  NKAL +  D+  L    +H++ +    D A+A +  V E      +      ++
Sbjct: 328 GALKDLNKALQVQPDDVWLLIKRAHVFKMIARGDKALADLDSVIELDPENHEARLMRGSL 387

Query: 384 TKNEK---LAIKQLRENNDIIIRPADKGGKTVV----MDKADYTQKMTSILNSNDYEIIP 436
             N+K    AI+ L+   D++  P D     ++    + K D  + +  I          
Sbjct: 388 YFNDKQLERAIQDLKIAIDLL--PEDAAAYQLLAEAFLKKGDTPEALKMI---------- 435

Query: 437 GDPTKTIEESEKYGNLENESGQKHAA-SDFTKAFADLDEAEKVDPNVADSYYQRGQIYCL 495
               + +++   +       G+ H A S   +A      A  +DPN  ++  +R +++  
Sbjct: 436 ---GQALKKESSFPAAFVTLGEIHMADSHMDQALEAYSRALTIDPNSFEARMRRAELFIE 492

Query: 496 FGQYEEALRNLDKTIALNP 514
              Y+ A+++L+     NP
Sbjct: 493 LNNYQNAVQDLEHAAKSNP 511



 Score = 56.2 bits (134), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 52/238 (21%), Positives = 111/238 (46%), Gaps = 46/238 (19%)

Query: 104 RATVYIFTSQSTKAIEDLTQLVEDTSVDPKIKVNAHIKRAVVHLHAASDFTKAFADLDEA 163
           +AT+ +   +  +A+E L Q +     +P    N    RA+++L    ++  A  DL++A
Sbjct: 282 QATILMMMGRYDEALEMLRQSILLEPDNPLPYTN----RALLYL-GTGNYLGALKDLNKA 336

Query: 164 EKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQRHFVVHKMIVPGD 223
            +V P+      +R  ++ +  + ++AL +LD  I L+P  H AR  R  +        +
Sbjct: 337 LQVQPDDVWLLIKRAHVFKMIARGDKALADLDSVIELDPENHEARLMRGSLYF------N 390

Query: 224 RERVEQSLKEFRNFVDTHSNVVEACTLFAQVLVDQEDFDGAEEYFNRSIRVDPENASLYV 283
            +++E+++++ +  +D                                  + PE+A+ Y 
Sbjct: 391 DKQLERAIQDLKIAID----------------------------------LLPEDAAAYQ 416

Query: 284 HRAMLMLQARGNVDEAIKLIEKAISIDKSCMFAYETLGTIEVQRGRLEEAVKCFNKAL 341
             A   L+ +G+  EA+K+I +A+  + S   A+ TLG I +    +++A++ +++AL
Sbjct: 417 LLAEAFLK-KGDTPEALKMIGQALKKESSFPAAFVTLGEIHMADSHMDQALEAYSRAL 473



 Score = 40.4 bits (93), Expect = 2.5,   Method: Compositional matrix adjust.
 Identities = 29/111 (26%), Positives = 50/111 (45%), Gaps = 8/111 (7%)

Query: 437 GDPTKTIEESEKYGNLENESGQKH--------AASDFTKAFADLDEAEKVDPNVADSYYQ 488
           G P K++E+ +K   L+ E  + +        A +   KA  D  +A  +DP  +     
Sbjct: 222 GQPQKSLEDFDKALELDPEMKEIYWYRADAHRAINALDKALKDYQKAASIDPEDSILLLN 281

Query: 489 RGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQRHFVWTSTLAELMAFSD 539
           +  I  + G+Y+EAL  L ++I L P+  +    R  ++  T   L A  D
Sbjct: 282 QATILMMMGRYDEALEMLRQSILLEPDNPLPYTNRALLYLGTGNYLGALKD 332


>gi|156740598|ref|YP_001430727.1| hypothetical protein Rcas_0580 [Roseiflexus castenholzii DSM 13941]
 gi|156231926|gb|ABU56709.1| TPR repeat-containing protein [Roseiflexus castenholzii DSM 13941]
          Length = 319

 Score = 68.9 bits (167), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 54/200 (27%), Positives = 95/200 (47%), Gaps = 3/200 (1%)

Query: 152 DFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQR 211
           ++ +A AD D A  +DP+++ +++ RG  Y L  +Y+ ALR+  + I L+P +  A   R
Sbjct: 73  NYIEAIADYDRALALDPSMSRAFHNRGLAYALLKEYDAALRDYAQAIHLDPAYRRAYENR 132

Query: 212 HFVVHKMIVPGDRERVEQSLKEFRNFVDTHSNVVEACTLFAQ--VLVDQEDFDGAEEYFN 269
             ++ ++      E + Q L +    +       EA   + Q  +LV   D   A E F+
Sbjct: 133 VRLLEELTASTPDETLLQQLADDYGSLARLIPEAEAPYRYRQGLILVRLNDRTAAREAFD 192

Query: 270 RSIRVDPENASLYVHRAMLMLQARGNVDEAIKLIEKAISIDKSCMFAYETLGTIEVQRGR 329
            +IR  P++      RA+L   A G+++ A+  ++ A+ +      AY   G I   +G 
Sbjct: 193 AAIRARPQHVDALYERALLHY-AVGDLNAALADLDTALRLSPRAANAYYARGLIRHTQGD 251

Query: 330 LEEAVKCFNKALPLARDEAE 349
              A+  F +AL L  D  E
Sbjct: 252 PRSAIADFGQALLLRPDYPE 271



 Score = 46.6 bits (109), Expect = 0.032,   Method: Compositional matrix adjust.
 Identities = 27/77 (35%), Positives = 43/77 (55%), Gaps = 4/77 (5%)

Query: 136 VNAHIKRAVVHLHAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLD 195
           V+A  +RA++H +A  D   A ADLD A ++ P  A++YY RG I    G    A+ +  
Sbjct: 202 VDALYERALLH-YAVGDLNAALADLDTALRLSPRAANAYYARGLIRHTQGDPRSAIADFG 260

Query: 196 KTIALNPNFH---VARA 209
           + + L P++    +ARA
Sbjct: 261 QALLLRPDYPEALIARA 277



 Score = 43.9 bits (102), Expect = 0.20,   Method: Compositional matrix adjust.
 Identities = 19/56 (33%), Positives = 35/56 (62%)

Query: 464 DFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVA 519
           ++ +A AD D A  +DP+++ +++ RG  Y L  +Y+ ALR+  + I L+P +  A
Sbjct: 73  NYIEAIADYDRALALDPSMSRAFHNRGLAYALLKEYDAALRDYAQAIHLDPAYRRA 128



 Score = 41.2 bits (95), Expect = 1.4,   Method: Compositional matrix adjust.
 Identities = 22/65 (33%), Positives = 34/65 (52%), Gaps = 3/65 (4%)

Query: 460 HAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFH-- 517
           +A  D   A ADLD A ++ P  A++YY RG I    G    A+ +  + + L P++   
Sbjct: 213 YAVGDLNAALADLDTALRLSPRAANAYYARGLIRHTQGDPRSAIADFGQALLLRPDYPEA 272

Query: 518 -VARA 521
            +ARA
Sbjct: 273 LIARA 277


>gi|307152867|ref|YP_003888251.1| hypothetical protein Cyan7822_3021 [Cyanothece sp. PCC 7822]
 gi|306983095|gb|ADN14976.1| Tetratricopeptide TPR_2 repeat protein [Cyanothece sp. PCC 7822]
          Length = 846

 Score = 68.9 bits (167), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 85/353 (24%), Positives = 154/353 (43%), Gaps = 29/353 (8%)

Query: 174 YYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQRHFVVHKMIVPGDRERVEQSLKE 233
           Y +RG +    G Y+EA+ + +K I L P+   A  +R     ++      E  ++++ +
Sbjct: 407 YTERGSVLAYSGHYQEAIADYNKAIELKPH-PWAYNKRGLAYSEL------EEYQKAIAD 459

Query: 234 FRNFVDTHSNVVEACTLFAQVLVDQEDFDGAEEYFNRSIRVDPENASLYVHRAMLMLQAR 293
           F   ++   +   A      V  D +D+D A   +N++I  +   A  Y +R  L L  +
Sbjct: 460 FNKTIELEPDADYAYNNRGNVYKDLKDYDKALADYNKAISYNYVGA--YNNRGNLYLDLK 517

Query: 294 GNVDEAIKLIEKAISIDKSCMFAYETLGTIEVQRGRLEEAVKCFNKALPLARDEAELSHI 353
               +A+    K I ID      Y   G +  +    ++A   ++KA+ +  ++   S  
Sbjct: 518 -EYQKALADFNKGIEIDSENSLLYGNRGRVYSELKDYKKAFDDYSKAIEINPNQ---SFY 573

Query: 354 YSLRDAAIAQMK----VCERYNIKKKVSPRSQNITK---NEKLAIKQLRENNDIIIRPAD 406
           Y+LR      +K    V + Y    ++ P  + I +   N   A + L+E      +  D
Sbjct: 574 YTLRARVSQDLKDYNTVIKDYTKVIELKPEQEKIVEAYANRAGAYQNLKE----FQKALD 629

Query: 407 KGGKTV--VMDK-ADYTQKMTSILNSNDYEIIPGDPTKTIEESEKYGNLENESGQKH-AA 462
              K +  V D+   Y  +      S DY+    D TK+IE   K+  L N  GQ +   
Sbjct: 630 DANKVIELVPDQFYGYVVRGGIYAESGDYQKTVDDYTKSIEIYPKWFVLYNRRGQAYFNL 689

Query: 463 SDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPN 515
             +  A AD  ++ +++PN+ D Y+ R  IY   G YE A+++  + + L+ N
Sbjct: 690 KQYQNALADYTKSVEIEPNI-DGYFGRAIIYHKQGNYEAAVQDYKQILNLDQN 741



 Score = 48.1 bits (113), Expect = 0.012,   Method: Compositional matrix adjust.
 Identities = 49/265 (18%), Positives = 104/265 (39%), Gaps = 64/265 (24%)

Query: 136 VNAHIKRAVVHLHAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLD 195
           V A+  R  ++L    ++ KA AD ++  ++D   +  Y  RG++Y     Y++A  +  
Sbjct: 503 VGAYNNRGNLYLDL-KEYQKALADFNKGIEIDSENSLLYGNRGRVYSELKDYKKAFDDYS 561

Query: 196 KTIALNPN--FHV---ARAQRHFVVHKMIVP-------------------GDRERVEQSL 231
           K I +NPN  F+    AR  +    +  ++                     +R    Q+L
Sbjct: 562 KAIEINPNQSFYYTLRARVSQDLKDYNTVIKDYTKVIELKPEQEKIVEAYANRAGAYQNL 621

Query: 232 KEFRNFVDTHSNVVE-------ACTLFAQVLVDQEDFDGAEEYFNRSIRVDPENASLYVH 284
           KEF+  +D  + V+E          +   +  +  D+    + + +SI + P+   LY  
Sbjct: 622 KEFQKALDDANKVIELVPDQFYGYVVRGGIYAESGDYQKTVDDYTKSIEIYPKWFVLYNR 681

Query: 285 RAM--------------------------------LMLQARGNVDEAIKLIEKAISIDKS 312
           R                                  ++   +GN + A++  ++ +++D++
Sbjct: 682 RGQAYFNLKQYQNALADYTKSVEIEPNIDGYFGRAIIYHKQGNYEAAVQDYKQILNLDQN 741

Query: 313 CMFAYETLGTIEVQRGRLEEAVKCF 337
            +  +  LG I  + G +  A+K +
Sbjct: 742 NLATWNNLGLILYETGDIANAIKPW 766



 Score = 46.6 bits (109), Expect = 0.033,   Method: Compositional matrix adjust.
 Identities = 60/285 (21%), Positives = 123/285 (43%), Gaps = 26/285 (9%)

Query: 27  IKTYLKSFPNDPILQPDGLSNGVELTNGDTNESHELDLLSKAKRAFEHEDYLTAIRHCTE 86
           +K Y K+F        D  S  +E+   + N+S    L  +A+ + + +DY T I+  T+
Sbjct: 550 LKDYKKAF--------DDYSKAIEI---NPNQSFYYTL--RARVSQDLKDYNTVIKDYTK 596

Query: 87  EIESTSSNHTKALARLLRATVYIFTSQSTKAIEDLTQLVEDTSVDPKIKVNAHIKRAVVH 146
            IE          A   RA  Y    +  KA++D  +++E   + P  +   ++ R  ++
Sbjct: 597 VIELKPEQEKIVEAYANRAGAYQNLKEFQKALDDANKVIE---LVPD-QFYGYVVRGGIY 652

Query: 147 LHAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHV 206
             +  D+ K   D  ++ ++ P     Y +RGQ Y    QY+ AL +  K++ + PN   
Sbjct: 653 AESG-DYQKTVDDYTKSIEIYPKWFVLYNRRGQAYFNLKQYQNALADYTKSVEIEPNID- 710

Query: 207 ARAQRHFVVHKMIVPGDRERVEQSLKEFRNFVDTHSNVVEACTLFAQVLVDQEDFDGAEE 266
               R  + HK      +   E ++++++  ++   N +        +L +  D   A +
Sbjct: 711 GYFGRAIIYHK------QGNYEAAVQDYKQILNLDQNNLATWNNLGLILYETGDIANAIK 764

Query: 267 YFNRSIRVDPENASLYVHRAMLMLQARGNVDEAIKLIEKAISIDK 311
            +   +      A   +  A+  L  +G  ++ + L E A+++D+
Sbjct: 765 PWTVIVESKAPIAETQLALAV-ALYNQGEQEKGLALAENALTLDR 808



 Score = 43.1 bits (100), Expect = 0.37,   Method: Compositional matrix adjust.
 Identities = 93/394 (23%), Positives = 151/394 (38%), Gaps = 65/394 (16%)

Query: 186 QYEEALRNLDKTIAL-----NPNFHVARAQRHFVVHKMIVPGDRERVEQSLKEFRNFVDT 240
           ++E+A+   D+ I +     NP+    +        K +       + QS +EF + +  
Sbjct: 305 EFEKAITAFDQAITVLKSTPNPSSQTKQDLAKAYYAKGLTLWFTRDLSQSAQEFIHAIQQ 364

Query: 241 HSNVVEACTLFAQVLVDQEDFDGAEEYFNRSIRVDPE-NASLYVHRAMLMLQARGNVDEA 299
                 A       L    ++  A + +N+   ++P+ +  LY  R   +L   G+  EA
Sbjct: 365 DDQFYSAWRWLGYDLFLMRNYTDALKVYNKLFEMNPKGDFVLYTERGS-VLAYSGHYQEA 423

Query: 300 IKLIEKAISIDKSCMFAYETLGTIEVQRGRLEEAVKCFNKALPLARDEAELSHIYSLR-- 357
           I    KAI + K   +AY   G    +    ++A+  FNK + L   E +  + Y+ R  
Sbjct: 424 IADYNKAIEL-KPHPWAYNKRGLAYSELEEYQKAIADFNKTIEL---EPDADYAYNNRGN 479

Query: 358 --------DAAIAQMKVCERYNIKKKVSPRSQNITKNEKLAIKQLRENNDII-------I 402
                   D A+A       YN     + R  N+  + K   K L + N  I       +
Sbjct: 480 VYKDLKDYDKALADYNKAISYNYVGAYNNRG-NLYLDLKEYQKALADFNKGIEIDSENSL 538

Query: 403 RPADKGGKTVVMDKADYTQKMTSI-----LNSN----------------DYEIIPGDPTK 441
              ++G   V  +  DY +          +N N                DY  +  D TK
Sbjct: 539 LYGNRG--RVYSELKDYKKAFDDYSKAIEINPNQSFYYTLRARVSQDLKDYNTVIKDYTK 596

Query: 442 TIE---ESEKYGN-LENESGQKHAASDFTKAFADLDEAEKVDPNVADSYYQ---RGQIYC 494
            IE   E EK      N +G      +F KA   LD+A KV   V D +Y    RG IY 
Sbjct: 597 VIELKPEQEKIVEAYANRAGAYQNLKEFQKA---LDDANKVIELVPDQFYGYVVRGGIYA 653

Query: 495 LFGQYEEALRNLDKTIALNPNFHVA---RAQRHF 525
             G Y++ + +  K+I + P + V    R Q +F
Sbjct: 654 ESGDYQKTVDDYTKSIEIYPKWFVLYNRRGQAYF 687


>gi|428298611|ref|YP_007136917.1| hypothetical protein Cal6303_1911 [Calothrix sp. PCC 6303]
 gi|428235155|gb|AFZ00945.1| Tetratricopeptide TPR_2 repeat-containing protein [Calothrix sp.
           PCC 6303]
          Length = 1338

 Score = 68.9 bits (167), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 87/427 (20%), Positives = 166/427 (38%), Gaps = 51/427 (11%)

Query: 107 VYIFTSQSTKAIEDLTQLVEDTSVDPKIKVNAH---IKRAVVHLHAA------SDFTKAF 157
           ++I    S   +E LT +  + +    I    H   I RA    + A       D   A 
Sbjct: 338 LWIRLQHSGSLVERLTSIPVNNTAQVFIDAPPHPSAIGRAQAWFYQALKQAKFGDLNGAI 397

Query: 158 ADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQRHFVVHK 217
           A  D A  + P+  + ++ RG      G  +EA+ + +K+I + P+++ A   R  ++  
Sbjct: 398 ASYDTAISITPDAYEYWFNRGLALFHLGYIKEAIASYEKSIVVKPDYYKAWLNRAVIL-- 455

Query: 218 MIVPGDRERVEQSLKEFRNFVDTHSNVVEACTLFAQVLVDQEDFDGAEEYFNRSIRVDPE 277
                ++ R + ++  F   ++ H    EA +  +  L+       A   ++++ R+ P 
Sbjct: 456 ----AEQGRYDDAIASFDKVIEIHPEANEAWSGRSLALLKLGKIPEAIYSYDQTTRLQPY 511

Query: 278 NASLYVHRAMLMLQARGNVDEAIKLIEKAISIDKSCMFAYETLGTIEVQRGRLEEAVKCF 337
           +   + HR + + + +    EA+   ++AI I       +   G  ++   R E+AV  F
Sbjct: 512 DPENWYHRGVALAENQ-QYAEAVTSFDEAIEIQPEQSIIWHQRGLSQLHLQRWEDAVISF 570

Query: 338 NKALPLARDEAELSHIYSLRDAAIAQMKVCERYNIKKKVSPRSQNITKNEKLAIKQLREN 397
            KAL       EL ++               R N  +K     Q I   +      L  N
Sbjct: 571 QKALKSQPGNHELWYL---------------RGNALEKSGQYQQAIASYD----NALELN 611

Query: 398 NDIIIRPADKGGKTVVMDKADYTQKMTSILNSNDYEIIPGDPTKTIE-ESEKYGNLENES 456
             +     D+G     + +A   Q   +I++ N          K +E E   Y    N++
Sbjct: 612 PSLHAVWIDRG-----VIQAHLQQWYEAIVSWN----------KALEIEPNLYLAWFNQA 656

Query: 457 GQKHAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNF 516
                  +  +A A  D A  ++PN   ++Y RG +    G+ E A+ + D  + +  ++
Sbjct: 657 IAWEKLGETQEAIASYDCALNIEPNFHTAWYNRGVLLASQGELEAAILSYDYALQIQSDY 716

Query: 517 HVARAQR 523
             A   R
Sbjct: 717 WEAWLAR 723


>gi|119512967|ref|ZP_01632028.1| serine/threonine kinase [Nodularia spumigena CCY9414]
 gi|119462380|gb|EAW43356.1| serine/threonine kinase [Nodularia spumigena CCY9414]
          Length = 713

 Score = 68.9 bits (167), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 77/379 (20%), Positives = 149/379 (39%), Gaps = 54/379 (14%)

Query: 153 FTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQRH 212
           +  A A   EA  + P+    +  +G+      +YEEAL   D+ I + P++  A + R 
Sbjct: 358 YQDALAAYQEAVSISPDYVPGWNGQGKTLSQLKKYEEALAAYDQAIQIQPDYVEAWSGRG 417

Query: 213 FVVHKMIVPGDRERVEQSLKEFRNFVDTHSNVVEACTLFAQVLVDQEDFDGAEEYFNRSI 272
           FV+       D +R  +++  F   +   +   E      ++  + + ++ A + +N++I
Sbjct: 418 FVLR------DLQRYPEAIASFDKALQLDNTAPEIWNAKGEIFRNLQQYNNAIQSYNQAI 471

Query: 273 RVDPENASLYVHRAMLMLQARGNVDEAIKLIEKAISIDKSCMFAYETLGTIEVQRGRLEE 332
            + P     +  + +     +   ++AI   E AI        A+ +LG       R + 
Sbjct: 472 ELQPNYYQAWYSKGLAFHNLK-QYNDAINAYETAIEFKPDYGQAWYSLGNALFNLNRFDN 530

Query: 333 AVKCFNKAL-------PLARDEAELSHIYSLRDAAIAQMKVCERYNIKKKVSPRSQNITK 385
           A+K ++KA+       P     + +  I      AI      E ++   K +P       
Sbjct: 531 ALKAYDKAVQYRPKFYPAWFSRSNILIILRRYPQAI------ESFDQAIKHNPNDYQAWY 584

Query: 386 NEKLAIKQLRENNDIIIRPADKGGKTVVMDKADYTQKMTSILNSNDYEIIPGDPTKTIEE 445
           +   A+ Q +   + I               A Y +   + +  NDY+I           
Sbjct: 585 SRGWALHQSQRYEEAI---------------ASYNK--AAAIKRNDYQI----------- 616

Query: 446 SEKYGNLENESGQKHAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRN 505
              + NL N    ++    + +A A  D+A +   N A+S+Y RG       +Y+EA+ +
Sbjct: 617 ---WYNLGNS---QYILQKYQQAIASYDKAVRYQTNHAESWYSRGNALLNLQRYKEAIDS 670

Query: 506 LDKTIALNPNFHVARAQRH 524
            D+ I   PN+  A   R+
Sbjct: 671 YDQAIKYKPNYRQAINARN 689



 Score = 61.2 bits (147), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 50/241 (20%), Positives = 110/241 (45%), Gaps = 9/241 (3%)

Query: 112 SQSTKAIEDLTQLVEDTSVDPKIKVNAHIKRAVVHLHAASDFTKAFADLDEAEKVDPNVA 171
           SQ  K  E L    +   + P   V A   R  V L     + +A A  D+A ++D    
Sbjct: 387 SQLKKYEEALAAYDQAIQIQPDY-VEAWSGRGFV-LRDLQRYPEAIASFDKALQLDNTAP 444

Query: 172 DSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQRHFVVHKMIVPGDRERVEQSL 231
           + +  +G+I+    QY  A+++ ++ I L PN++ A   +    H +      ++   ++
Sbjct: 445 EIWNAKGEIFRNLQQYNNAIQSYNQAIELQPNYYQAWYSKGLAFHNL------KQYNDAI 498

Query: 232 KEFRNFVDTHSNVVEACTLFAQVLVDQEDFDGAEEYFNRSIRVDPENASLYVHRAMLMLQ 291
             +   ++   +  +A       L +   FD A + ++++++  P+    +  R+ +++ 
Sbjct: 499 NAYETAIEFKPDYGQAWYSLGNALFNLNRFDNALKAYDKAVQYRPKFYPAWFSRSNILII 558

Query: 292 ARGNVDEAIKLIEKAISIDKSCMFAYETLGTIEVQRGRLEEAVKCFNKALPLARDEAELS 351
            R    +AI+  ++AI  + +   A+ + G    Q  R EEA+  +NKA  + R++ ++ 
Sbjct: 559 LR-RYPQAIESFDQAIKHNPNDYQAWYSRGWALHQSQRYEEAIASYNKAAAIKRNDYQIW 617

Query: 352 H 352
           +
Sbjct: 618 Y 618



 Score = 47.0 bits (110), Expect = 0.029,   Method: Compositional matrix adjust.
 Identities = 62/292 (21%), Positives = 119/292 (40%), Gaps = 26/292 (8%)

Query: 236 NFVDTHSNVV---EACTLFAQVLVDQEDFDGAEEYFNRSIRVDPENASLYVHRAMLMLQA 292
           N ++ H+ +    +  TLF     + + +  A   +  ++ + P+    +  +   + Q 
Sbjct: 335 NSINAHNAIALSEQGSTLF-----ELQRYQDALAAYQEAVSISPDYVPGWNGQGKTLSQL 389

Query: 293 RGNVDEAIKLIEKAISIDKSCMFAYETLGTIEVQRGRLEEAVKCFNKALPLARDEAELSH 352
           +   +EA+   ++AI I    + A+   G +     R  EA+  F+KAL L     E   
Sbjct: 390 K-KYEEALAAYDQAIQIQPDYVEAWSGRGFVLRDLQRYPEAIASFDKALQLDNTAPE--- 445

Query: 353 IYSLRDAAIAQMK----VCERYNIKKKVSPRSQNITKNEKLAIKQLRENNDIIIRPADKG 408
           I++ +      ++      + YN   ++ P       ++ LA   L++ ND I       
Sbjct: 446 IWNAKGEIFRNLQQYNNAIQSYNQAIELQPNYYQAWYSKGLAFHNLKQYNDAI-----NA 500

Query: 409 GKTVVMDKADYTQKMTSI----LNSNDYEIIPGDPTKTIEESEK-YGNLENESGQKHAAS 463
            +T +  K DY Q   S+     N N ++       K ++   K Y    + S       
Sbjct: 501 YETAIEFKPDYGQAWYSLGNALFNLNRFDNALKAYDKAVQYRPKFYPAWFSRSNILIILR 560

Query: 464 DFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPN 515
            + +A    D+A K +PN   ++Y RG       +YEEA+ + +K  A+  N
Sbjct: 561 RYPQAIESFDQAIKHNPNDYQAWYSRGWALHQSQRYEEAIASYNKAAAIKRN 612



 Score = 38.9 bits (89), Expect = 7.4,   Method: Compositional matrix adjust.
 Identities = 25/77 (32%), Positives = 39/77 (50%), Gaps = 8/77 (10%)

Query: 153 FTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVA----- 207
           + +A A  D+A +   N A+S+Y RG       +Y+EA+ + D+ I   PN+  A     
Sbjct: 630 YQQAIASYDKAVRYQTNHAESWYSRGNALLNLQRYKEAIDSYDQAIKYKPNYRQAINARN 689

Query: 208 RAQRHFVVHK---MIVP 221
            AQ+   V K   +IVP
Sbjct: 690 EAQKELSVDKPQPIIVP 706


>gi|427737546|ref|YP_007057090.1| cytochrome c biogenesis factor [Rivularia sp. PCC 7116]
 gi|427372587|gb|AFY56543.1| cytochrome c biogenesis factor [Rivularia sp. PCC 7116]
          Length = 652

 Score = 68.9 bits (167), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 69/257 (26%), Positives = 108/257 (42%), Gaps = 30/257 (11%)

Query: 151 SDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIAL----NPNFHV 206
           +DF  A  DL++A K++P  A +YY+R +     G+ E+A+++L K   L          
Sbjct: 269 ADFQGAIKDLNQAIKINPKYAFAYYRRAEARQNTGEREKAIKDLQKAAELFSEQGNKSDA 328

Query: 207 ARAQRHFVVHKMIVPGDRERVEQSLKEFRNFVDTHSNVVEACTLFAQVLVDQEDFDGAEE 266
            R+Q    + K   PG      Q++K   N  DT     +A        V   D  GA  
Sbjct: 329 FRSQGSMRMLKQDYPGAIAAFSQAIK--LNPKDT-----DAYNERGMTRVQSGDLKGALA 381

Query: 267 YFNRSIRVDPENASLYVHRAMLMLQARGNVDEAIKLIEKAISIDKSCMFAYETLGTIEVQ 326
            +N+S+ + P +A  Y+ R+   L+ +  +  AI  + +AISI  +    Y  LG I   
Sbjct: 382 DYNKSLSLQPSDAYAYMGRSFTHLKLQDKI-SAIADVNQAISIAPNYALPYLILGVIHYN 440

Query: 327 RGRLEEAVKCFNKALPLARDEAELSH------------------IYSLRDAAIAQMKVCE 368
            G   +A+  FNKA  L   +   S+                  I S   A  A  +  E
Sbjct: 441 FGDTPKAITTFNKASQLLAAQGNQSYAHGSQALAFQLSNNYPAAINSFTKAIKANPQDAE 500

Query: 369 RYNIKKKVSPRSQNITK 385
            Y ++  V  R+ NI K
Sbjct: 501 MYELRGDVYSRNGNIKK 517



 Score = 50.1 bits (118), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 49/207 (23%), Positives = 85/207 (41%), Gaps = 10/207 (4%)

Query: 138 AHIKRAVVHLHAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKT 197
           A++ R+  HL    D   A AD+++A  + PN A  Y   G I+  FG   +A+   +K 
Sbjct: 396 AYMGRSFTHLKL-QDKISAIADVNQAISIAPNYALPYLILGVIHYNFGDTPKAITTFNKA 454

Query: 198 ---IALNPNFHVARAQRHFVVHKMIVPGDRERVEQSLKEFRNFVDTHSNVVEACTLFAQV 254
              +A   N   A   +                  ++  F   +  +    E   L   V
Sbjct: 455 SQLLAAQGNQSYAHGSQALAFQL------SNNYPAAINSFTKAIKANPQDAEMYELRGDV 508

Query: 255 LVDQEDFDGAEEYFNRSIRVDPENASLYVHRAMLMLQARGNVDEAIKLIEKAISIDKSCM 314
                +   A   + ++IR++P +AS Y  RA + L  + +   A+  + KA+S+D S  
Sbjct: 509 YSRNGNIKKALADYAQAIRINPNDASAYTSRASIRLVQQKDSQGALTDLNKALSLDPSQD 568

Query: 315 FAYETLGTIEVQRGRLEEAVKCFNKAL 341
            AY     I +Q+   + A+   N A+
Sbjct: 569 KAYFFRTIIRIQQKDRQRALADINNAI 595



 Score = 41.2 bits (95), Expect = 1.5,   Method: Compositional matrix adjust.
 Identities = 65/340 (19%), Positives = 124/340 (36%), Gaps = 90/340 (26%)

Query: 187 YEEALRNLDKTIALNPNFHVARAQRHFVVHKMIVPGDRERVEQSLKEFRNFVDTHSNVVE 246
           ++ A+++L++ I +NP +  A  +R          G+RE+  + L++         N  +
Sbjct: 271 FQGAIKDLNQAIKINPKYAFAYYRRAEARQNT---GEREKAIKDLQKAAELFSEQGNKSD 327

Query: 247 ACTLFAQVLVDQEDFDGAEEYFNRSIRVDPENASLYVHRAMLMLQARGNVDEAIKLIEKA 306
           A      + + ++D+ GA   F+++I+++P++                            
Sbjct: 328 AFRSQGSMRMLKQDYPGAIAAFSQAIKLNPKDTD-------------------------- 361

Query: 307 ISIDKSCMFAYETLGTIEVQRGRLEEAVKCFNKALPLARDEAELSHIYSLRDAAIAQMKV 366
                    AY   G   VQ G L+ A+  +NK+L L   +A     Y+    +   +K+
Sbjct: 362 ---------AYNERGMTRVQSGDLKGALADYNKSLSLQPSDA-----YAYMGRSFTHLKL 407

Query: 367 CERYNIKKKVSPRSQNITKNEKLAIKQLRENNDIIIRPADKGGKTVVMDKADYTQKMTSI 426
            ++ +    ++  +Q I+     A+  L                               I
Sbjct: 408 QDKIS---AIADVNQAISIAPNYALPYL-------------------------------I 433

Query: 427 LNSNDYEIIPGDPTKTIEESEKYGNLENESGQKHAA-----------SDFTKAFADLDEA 475
           L    Y    GD  K I    K   L    G +  A           +++  A     +A
Sbjct: 434 LGVIHYNF--GDTPKAITTFNKASQLLAAQGNQSYAHGSQALAFQLSNNYPAAINSFTKA 491

Query: 476 EKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPN 515
            K +P  A+ Y  RG +Y   G  ++AL +  + I +NPN
Sbjct: 492 IKANPQDAEMYELRGDVYSRNGNIKKALADYAQAIRINPN 531



 Score = 40.0 bits (92), Expect = 3.2,   Method: Compositional matrix adjust.
 Identities = 30/114 (26%), Positives = 51/114 (44%), Gaps = 11/114 (9%)

Query: 437 GDPTKTIEESEKYGNLENESGQKHAA-----------SDFTKAFADLDEAEKVDPNVADS 485
           G+  K I++ +K   L +E G K  A            D+  A A   +A K++P   D+
Sbjct: 303 GEREKAIKDLQKAAELFSEQGNKSDAFRSQGSMRMLKQDYPGAIAAFSQAIKLNPKDTDA 362

Query: 486 YYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQRHFVWTSTLAELMAFSD 539
           Y +RG      G  + AL + +K+++L P+   A   R F       ++ A +D
Sbjct: 363 YNERGMTRVQSGDLKGALADYNKSLSLQPSDAYAYMGRSFTHLKLQDKISAIAD 416


>gi|158523125|ref|YP_001530995.1| hypothetical protein Dole_3115 [Desulfococcus oleovorans Hxd3]
 gi|158511951|gb|ABW68918.1| TPR repeat-containing protein [Desulfococcus oleovorans Hxd3]
          Length = 284

 Score = 68.9 bits (167), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 64/249 (25%), Positives = 110/249 (44%), Gaps = 48/249 (19%)

Query: 111 TSQSTKAIEDLTQLVEDTSVDPKIKVNAHIKRAVVHLHAASDFTKAFADLDEAEKVDPNV 170
             Q  KA+E  T+++ D S D      A+  RA        D+  A AD + A  ++P+ 
Sbjct: 6   AGQYDKAVEAFTRVL-DLSPD---FAPAYNNRAAARWDL-GDYEGAVADYNRALAINPDF 60

Query: 171 ADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQRHFVVHKMIVPGDRERVEQS 230
            +SY  RG+ +C  GQ ++AL +LD+ + L P+F  A   R   + K             
Sbjct: 61  PESYNGRGKAFCDMGQMDKALADLDRAVELAPDFADAYNNRGVALRKT------------ 108

Query: 231 LKEFRNFVDTHSNVVEACTLFAQVLVDQEDFDGAEEYFNRSIRVDPENAS-LYVHRAMLM 289
                                        DF GA    +R+I++ P+ A+  Y  R +  
Sbjct: 109 ----------------------------GDFIGALADHSRAIQMRPDRAAEFYNARGVTW 140

Query: 290 LQARGNVDEAIKLIEKAISIDKSCMFAYETLGTIEVQRGRLEEAVKCFNKALPLARDEAE 349
           L+ +G+ D+AI     A++ +    +AY  L +  +++G+ + A+  ++KAL +    AE
Sbjct: 141 LE-KGDPDKAIADFTAALAENPGFAWAYNNLASAWMEKGQPDRAMAAYDKALSIFPRMAE 199

Query: 350 -LSHIYSLR 357
            LS   S+R
Sbjct: 200 ALSGRGSVR 208



 Score = 62.4 bits (150), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 65/288 (22%), Positives = 124/288 (43%), Gaps = 33/288 (11%)

Query: 228 EQSLKEFRNFVDTHSNVVEACTLFAQVLVDQEDFDGAEEYFNRSIRVDPENASLYVHRAM 287
           +++++ F   +D   +   A    A    D  D++GA   +NR++ ++P+    Y  R  
Sbjct: 10  DKAVEAFTRVLDLSPDFAPAYNNRAAARWDLGDYEGAVADYNRALAINPDFPESYNGRGK 69

Query: 288 LMLQARGNVDEAIKLIEKAISIDKSCMFAYETLGTIEVQRGRLEEAVKCFNKALPLARDE 347
                 G +D+A+  +++A+ +      AY   G    + G    A+   ++A+ +  D 
Sbjct: 70  AFCD-MGQMDKALADLDRAVELAPDFADAYNNRGVALRKTGDFIGALADHSRAIQMRPDR 128

Query: 348 AELSHIYSLRDAAIAQMKVCERYNIKKKVSPRSQNITKNEKLAIKQLRENNDIIIRPADK 407
           A  +  Y+ R      +   E+ +  K ++  +  + +N   A       N++     +K
Sbjct: 129 A--AEFYNAR-----GVTWLEKGDPDKAIADFTAALAENPGFAWAY----NNLASAWMEK 177

Query: 408 GGKTVVMDKADYTQKMTSILNSNDYEIIPGDPTKTIEESEKYGNLENESGQKHAASDFTK 467
           G     M  A Y + ++         I P    +  E     G++  ++G      D+T 
Sbjct: 178 GQPDRAM--AAYDKALS---------IFP----RMAEALSGRGSVRAQAG------DYTG 216

Query: 468 AFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPN 515
           A ADLD+A +  P+   +YY R ++Y L G  E+AL N  K + L PN
Sbjct: 217 ALADLDKAIEFYPSYHTAYYNRARVYQLTGNREKALANAVKAVGLFPN 264



 Score = 53.5 bits (127), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 67/259 (25%), Positives = 105/259 (40%), Gaps = 29/259 (11%)

Query: 287 MLMLQARGNVDEAIKLIEKAISIDKSCMFAYETLGTIEVQRGRLEEAVKCFNKALPLARD 346
           M  +QA G  D+A++   + + +      AY          G  E AV  +N+AL +  D
Sbjct: 1   MASVQA-GQYDKAVEAFTRVLDLSPDFAPAYNNRAAARWDLGDYEGAVADYNRALAINPD 59

Query: 347 EAELSHIYSLRDAAIAQM----KVCERYNIKKKVSPRSQNITKNEKLAIKQLRENNDIII 402
                  Y+ R  A   M    K     +   +++P   +   N  +A   LR+  D I 
Sbjct: 60  ---FPESYNGRGKAFCDMGQMDKALADLDRAVELAPDFADAYNNRGVA---LRKTGDFIG 113

Query: 403 RPADKGGKTVVM--DKAD--YTQKMTSILNSNDYEIIPGDPTKTIEE----SEKYGNLEN 454
             AD   + + M  D+A   Y  +  + L   D +    D T  + E    +  Y NL +
Sbjct: 114 ALADHS-RAIQMRPDRAAEFYNARGVTWLEKGDPDKAIADFTAALAENPGFAWAYNNLAS 172

Query: 455 ---ESGQKHAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIA 511
              E GQ        +A A  D+A  + P +A++   RG +    G Y  AL +LDK I 
Sbjct: 173 AWMEKGQPD------RAMAAYDKALSIFPRMAEALSGRGSVRAQAGDYTGALADLDKAIE 226

Query: 512 LNPNFHVARAQRHFVWTST 530
             P++H A   R  V+  T
Sbjct: 227 FYPSYHTAYYNRARVYQLT 245



 Score = 47.4 bits (111), Expect = 0.021,   Method: Compositional matrix adjust.
 Identities = 24/54 (44%), Positives = 33/54 (61%)

Query: 150 ASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPN 203
           A D+T A ADLD+A +  P+   +YY R ++Y L G  E+AL N  K + L PN
Sbjct: 211 AGDYTGALADLDKAIEFYPSYHTAYYNRARVYQLTGNREKALANAVKAVGLFPN 264



 Score = 41.2 bits (95), Expect = 1.4,   Method: Compositional matrix adjust.
 Identities = 39/152 (25%), Positives = 60/152 (39%), Gaps = 29/152 (19%)

Query: 104 RATVYIFTSQSTKAIEDLTQLVEDTSVDPKIKVNAHIKRAVVHLHAA----SDFTKAFAD 159
           R   ++      KAI D T  + +         N     A  +L +A        +A A 
Sbjct: 136 RGVTWLEKGDPDKAIADFTAALAE---------NPGFAWAYNNLASAWMEKGQPDRAMAA 186

Query: 160 LDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQRHFVVHKMI 219
            D+A  + P +A++   RG +    G Y  AL +LDK I   P++H A   R  V     
Sbjct: 187 YDKALSIFPRMAEALSGRGSVRAQAGDYTGALADLDKAIEFYPSYHTAYYNRARVYQ--- 243

Query: 220 VPGDRERVEQSLKEFRNFVDTHSNVVEACTLF 251
           + G+RE+               +N V+A  LF
Sbjct: 244 LTGNREKA-------------LANAVKAVGLF 262


>gi|125863515|gb|ABN58564.1| TOM70 [Saccharomyces cerevisiae]
 gi|125863525|gb|ABN58573.1| TOM70 [Saccharomyces cerevisiae]
 gi|365763569|gb|EHN05097.1| Tom70p [Saccharomyces cerevisiae x Saccharomyces kudriavzevii VIN7]
          Length = 617

 Score = 68.9 bits (167), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 65/250 (26%), Positives = 119/250 (47%), Gaps = 15/250 (6%)

Query: 135 KVNAHIKRAVVHLHAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNL 194
           +V ++I  A++ +   +D T+ +   D+A K+D N +  YY RGQ+  +   Y++A ++ 
Sbjct: 362 RVISYIYMALI-MADRNDSTEYYNYFDKALKLDSNNSSVYYHRGQMNFILQNYDQAGKDF 420

Query: 195 DKTIALNPNFHVARAQRHFVVHKMIVPGDRERVEQSLKEFRNFVDTHSNVVEACTLFAQV 254
           DK   L+P       Q   + ++     D E +    K  R F +      E    FA++
Sbjct: 421 DKAKELDPENIFPYIQLACLAYRENKFDDCETLFSEAK--RKFPEAP----EVPNFFAEI 474

Query: 255 LVDQEDFDGAEEYFNRSIRVDPENASLYVHRAMLMLQAR--------GNVDEAIKLIEKA 306
           L D+ DFD A + ++ +I ++ +   +YV  A L+ +A          N  EA  L+EKA
Sbjct: 475 LTDKNDFDKALKQYDLAIELENKLDGIYVGIAPLVGKATLLTRNPTVENFIEATNLLEKA 534

Query: 307 ISIDKSCMFAYETLGTIEVQRGRLEEAVKCFNKALPLARDEAELSHIYSLRDAAIAQMKV 366
             +D     A   L  +++Q+  ++EA+  F ++  LAR   E     +  +AA  Q ++
Sbjct: 535 SKLDPRSEQAKIGLAQMKLQQEDIDEAITLFEESADLARTMEEKLQAITFAEAAKVQQRI 594

Query: 367 CERYNIKKKV 376
                + KK+
Sbjct: 595 RSDPVLAKKI 604


>gi|386813638|ref|ZP_10100862.1| conserved hypothetical protein [planctomycete KSU-1]
 gi|386403135|dbj|GAB63743.1| conserved hypothetical protein [planctomycete KSU-1]
          Length = 405

 Score = 68.9 bits (167), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 86/376 (22%), Positives = 160/376 (42%), Gaps = 63/376 (16%)

Query: 142 RAVVHLHAASDFTK------AFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLD 195
           +A  H+  A  F K      A  +  +  + DPN+A++YY RG++Y    + E+A  +  
Sbjct: 25  KAKKHIDVAEGFVKEKKLDEALVEYTKVIEADPNLAEAYYGRGKVYFELERLEDAAADFR 84

Query: 196 KTIALNPNFHVARAQRHFVVHKMIVPGDRERVEQSLKEFRNFVDTHSNVVEACTLFAQVL 255
           K I +  N+  A  +      K+  P D    ++  K  +N  D     V+    + ++ 
Sbjct: 85  KAIDVKSNYIDAHKKLAETFMKIGAPDDE--FQKRFKAIQNDPDNAMGYVDLGVFYHKL- 141

Query: 256 VDQEDFDGAEEYFNRSIRVDPENASLYVHRAMLMLQARGNVDEAIKLIEKAISIDKSCMF 315
             ++D D  E+Y  +++ +DP N+ +  +  +  L   G  ++A  + ++AI I+ +   
Sbjct: 142 --EKDIDAIEQY-KQALELDPNNSFILYNLGVGYLDM-GLYEDAETIFKQAIEINPTHDN 197

Query: 316 AYETLGTIEVQRGRLEEAVKCFNKAL---PLARDEAELSHIYSLR----DAAIAQMKVCE 368
           A+  L     +RG+++E +K  NK L   P   +   +  +  LR    D AIAQ     
Sbjct: 198 AHYNLAVALHKRGKIDECIKELNKTLEVNPKYSNSYVIFGLIKLREKKFDEAIAQ----- 252

Query: 369 RYNIKKKVSPRSQNITKNEKLAIKQLRENNDIIIRPADKGGKTVVMDKADYTQKMTSILN 428
            YN   ++ P +                                   +A Y + +   L 
Sbjct: 253 -YNKAMEIDPDNL----------------------------------EARYQRAIVFALQ 277

Query: 429 SNDYEIIPGDPTKTIEESEKYGNLENESGQKHAASD-FTKAFADLDE-AEKVDPNVADSY 486
              Y+    +  K +E++ K+ +     G  +  +D   KA    D+ A+K+DP   D+Y
Sbjct: 278 ER-YDDALAENMKILEKNPKHASAAYNIGVIYHRTDRLDKAMEWYDKVAKKIDPLYEDAY 336

Query: 487 YQRGQIYCLFGQYEEA 502
           Y RGQ+Y + G + +A
Sbjct: 337 YTRGQLYSMKGDHSKA 352


>gi|425440272|ref|ZP_18820578.1| putative Tetratricopeptide repeat protein [Microcystis aeruginosa PCC
            9717]
 gi|389719348|emb|CCH96816.1| putative Tetratricopeptide repeat protein [Microcystis aeruginosa PCC
            9717]
          Length = 1539

 Score = 68.9 bits (167), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 93/417 (22%), Positives = 175/417 (41%), Gaps = 50/417 (11%)

Query: 151  SDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQ 210
             D+  A AD++EA ++ P++A +Y  RG +    G  + A+ ++++ + L P+   A A 
Sbjct: 694  GDYRGAIADVNEALRLQPDLAIAYQFRGTLKSEQGDNQGAIADINEALRLQPDNAGAYAA 753

Query: 211  RHFVVHKMIVPGDRERVEQSLKEFRNFVDTHSNVVEACTLFAQVLVDQEDFDGAEEYFNR 270
            R  V  +M   GD++R+ +   +  + +      +     +A+ ++  +D+  A E +  
Sbjct: 754  RGIVYARM---GDQQRLAEDFNKALS-LQPDDAWIHQNRGYARFIL--KDYQKAVEDYTE 807

Query: 271  SIRVDPENA-SLYVHRAMLMLQARGNVDEAIKLIEKAISIDKSCMFAYETLGTIEVQRGR 329
            +IR+ PE+A   Y  R  +  Q   +  +AI+   +A+    + + AY   G    + G 
Sbjct: 808  AIRLAPESAYQFYTERGFVRYQQE-DYKKAIEDYTEALRFRPNYVMAYVRRGEAYAKLGN 866

Query: 330  LEEAVKCFNKALPLARDEAELSHIYSLRDAAIAQMKVCER----YNIKKKVSP------- 378
             +   + F KAL L  D A    IY+ R      +K  ++    Y+   +++P       
Sbjct: 867  QQGFTEDFKKALSLQPDNA---WIYTERGDTYFFLKDKQKGIGDYDEAIRLAPELADFYY 923

Query: 379  --RSQNITKNEKLAIKQLRENNDIIIRP------ADKGGKTVVMDK-----ADYTQ---- 421
              R       E      +     I ++P       ++G    + +      ADYT+    
Sbjct: 924  NWRGNQFYGQEDYKAAIVDYTKAIGLKPDEAWYYYNRGDAYRLQEDYKEAIADYTEAIRL 983

Query: 422  ----------KMTSILNSNDYEIIPGDPTKTIEESEKYG-NLENESGQKHAASDFTKAFA 470
                      +  +     +Y+    D T+ I    KY  N  + S  +    D   A A
Sbjct: 984  KPDLADAFNGRAITYARQKNYQGAIADYTEAIRLDPKYDENYYSRSQVRQELGDLQGALA 1043

Query: 471  DLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQRHFVW 527
            DL+EA ++DP+   +  +RG I      Y+EA+ +  + I L P+F  A   R   +
Sbjct: 1044 DLNEAVRLDPDDVGNLRERGDIRRQLKDYQEAIADYTEAIRLKPDFADAYNARGLAY 1100



 Score = 66.6 bits (161), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 120/507 (23%), Positives = 207/507 (40%), Gaps = 83/507 (16%)

Query: 72   FEHEDYLTAIRHCTEEIESTSSNHTKALARLLRATVYIFTSQSTKAIEDLTQLVEDTSVD 131
            ++ EDY  AI   TE +     N+  A  R  R   Y          ED  + +   S+ 
Sbjct: 828  YQQEDYKKAIEDYTEALR-FRPNYVMAYVR--RGEAYAKLGNQQGFTEDFKKAL---SLQ 881

Query: 132  PKIKVNAHI--KRAVVHLHAASDFTKAFADLDEAEKVDPNVADSYYQ-RGQIYCLFGQ-- 186
            P    NA I  +R   +     D  K   D DEA ++ P +AD YY  RG  +  +GQ  
Sbjct: 882  PD---NAWIYTERGDTYFFL-KDKQKGIGDYDEAIRLAPELADFYYNWRGNQF--YGQED 935

Query: 187  YEEALRNLDKTIALNPNFHVARAQRHFVVHKMIVPGDRERVEQSLKE----FRNFVDTHS 242
            Y+ A+ +  K I L P+      +  +  ++    GD  R+++  KE    +   +    
Sbjct: 936  YKAAIVDYTKAIGLKPD------EAWYYYNR----GDAYRLQEDYKEAIADYTEAIRLKP 985

Query: 243  NVVEACTLFAQVLVDQEDFDGAEEYFNRSIRVDPENASLYVHRAMLMLQARGNVDEAIKL 302
            ++ +A    A     Q+++ GA   +  +IR+DP+    Y  R+ +  Q  G++  A+  
Sbjct: 986  DLADAFNGRAITYARQKNYQGAIADYTEAIRLDPKYDENYYSRSQVR-QELGDLQGALAD 1044

Query: 303  IEKAISIDKSCMFAYETLGTIEVQRGRLEEAVKCFNKALPLARDEAELSHIYSLRDAAI- 361
            + +A+ +D   +      G I  Q    +EA+  + +A+ L  D A+    Y+ R  A  
Sbjct: 1045 LNEAVRLDPDDVGNLRERGDIRRQLKDYQEAIADYTEAIRLKPDFAD---AYNARGLAYH 1101

Query: 362  AQMKVCER---YNIKKKVSPR---------SQNITKNEKLAIKQLRENNDIIIRP----- 404
             Q K  E    Y+   ++ P+         +  +  + + AI    E   I ++P     
Sbjct: 1102 LQEKYPEAIKDYSEAVRIYPKPFYYGNRGEAHRLQGDYQEAITDYTEA--IGLKPDFADA 1159

Query: 405  -----------ADKGGKTVVMDKADYTQKMTSILNSNDYEI-------IPGDPTKTIEES 446
                        DK G    + KA   Q      N + Y++       I G  T+  +E 
Sbjct: 1160 YNARGLAKAEIGDKQGAIEDLQKA--AQLFREQGNDDAYQVAQTKIREIQGISTE--DEQ 1215

Query: 447  EKYGNLENESGQ------KHAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYE 500
               GN +N           +   D+  A A+ +EA ++ P  A +Y  RG  Y     Y+
Sbjct: 1216 VSRGNPQNVDAHLGRGIASYKREDYQTAIAEYNEAIRLAPQNAFAYNLRGNAYFAQENYQ 1275

Query: 501  EALRNLDKTIALNPNFHVARAQRHFVW 527
            +A+++  + I LNP F VA + R  ++
Sbjct: 1276 QAIKDYTQAIRLNPKFAVAYSNRGNIY 1302



 Score = 65.1 bits (157), Expect = 9e-08,   Method: Compositional matrix adjust.
 Identities = 101/467 (21%), Positives = 190/467 (40%), Gaps = 44/467 (9%)

Query: 67   KAKRAFEHEDYLTAIRHCTEEIESTSSNHTKALARLLRATVYIFTSQSTKAIEDLTQLVE 126
            +  + +  EDY  AI   T+ I        +A     R   Y       +AI D T+ + 
Sbjct: 926  RGNQFYGQEDYKAAIVDYTKAI---GLKPDEAWYYYNRGDAYRLQEDYKEAIADYTEAIR 982

Query: 127  DTSVDPKIKVNAHIKRAVVHLHAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQ 186
               + P +  +A   RA+ +     ++  A AD  EA ++DP   ++YY R Q+    G 
Sbjct: 983  ---LKPDL-ADAFNGRAITYARQ-KNYQGAIADYTEAIRLDPKYDENYYSRSQVRQELGD 1037

Query: 187  YEEALRNLDKTIALNPNFHVARAQRHFVVHKMIVPGDRERVEQSLKEFRNFVDTHSNVVE 246
             + AL +L++ + L+P+           V  +   GD   + + LK+++  +  ++  + 
Sbjct: 1038 LQGALADLNEAVRLDPD----------DVGNLRERGD---IRRQLKDYQEAIADYTEAIR 1084

Query: 247  ACTLFAQVLVD-------QEDFDGAEEYFNRSIRVDPENASLYVHRAMLMLQARGNVDEA 299
                FA            QE +  A + ++ ++R+ P+    Y        + +G+  EA
Sbjct: 1085 LKPDFADAYNARGLAYHLQEKYPEAIKDYSEAVRIYPK--PFYYGNRGEAHRLQGDYQEA 1142

Query: 300  IKLIEKAISIDKSCMFAYETLGTIEVQRGRLEEAVKCFNKALPLARDEAELSHIYSLRDA 359
            I    +AI +      AY   G  + + G  + A++   KA  L R++          DA
Sbjct: 1143 ITDYTEAIGLKPDFADAYNARGLAKAEIGDKQGAIEDLQKAAQLFREQGN-------DDA 1195

Query: 360  -AIAQMKVCERYNIK---KKVS-PRSQNITKNEKLAIKQL-RENNDIIIRPADKGGKTVV 413
              +AQ K+ E   I    ++VS    QN+  +    I    RE+    I   ++  +   
Sbjct: 1196 YQVAQTKIREIQGISTEDEQVSRGNPQNVDAHLGRGIASYKREDYQTAIAEYNEAIRLAP 1255

Query: 414  MDKADYTQKMTSILNSNDYEIIPGDPTKTIEESEKYG-NLENESGQKHAASDFTKAFADL 472
             +   Y  +  +     +Y+    D T+ I  + K+     N     +   ++  A +D 
Sbjct: 1256 QNAFAYNLRGNAYFAQENYQQAIKDYTQAIRLNPKFAVAYSNRGNIYYELEEYKSAVSDY 1315

Query: 473  DEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVA 519
             EA ++ P+ AD Y++RG        Y  A+ +  + I L P++  A
Sbjct: 1316 TEAIRIKPDDADFYFKRGDARDQSEDYSGAIADYTEAIRLKPDYTTA 1362



 Score = 61.6 bits (148), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 92/426 (21%), Positives = 170/426 (39%), Gaps = 72/426 (16%)

Query: 151  SDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPN---FHVA 207
             D   A AD++EA ++ P+ A +Y  RG +Y   G  +    + +K ++L P+    H  
Sbjct: 728  GDNQGAIADINEALRLQPDNAGAYAARGIVYARMGDQQRLAEDFNKALSLQPDDAWIHQN 787

Query: 208  RAQRHFVV--------------------------HKMIVPGDRERVEQSLKEFRNFVDTH 241
            R    F++                           +  V   +E  +++++++   +   
Sbjct: 788  RGYARFILKDYQKAVEDYTEAIRLAPESAYQFYTERGFVRYQQEDYKKAIEDYTEALRFR 847

Query: 242  SNVVEACTLFAQVLVDQEDFDGAEEYFNRSIRVDPENASLYVHRA--MLMLQAR----GN 295
             N V A     +      +  G  E F +++ + P+NA +Y  R      L+ +    G+
Sbjct: 848  PNYVMAYVRRGEAYAKLGNQQGFTEDFKKALSLQPDNAWIYTERGDTYFFLKDKQKGIGD 907

Query: 296  VDEAIKLIEKAISIDKSCMFAYETLGTIEVQRGRLEEAVKCFNKALPLARDEAELSHIYS 355
             DEAI+L  +         F Y   G     +   + A+  + KA+ L  DEA   + Y+
Sbjct: 908  YDEAIRLAPEL------ADFYYNWRGNQFYGQEDYKAAIVDYTKAIGLKPDEA--WYYYN 959

Query: 356  LRDAAIAQMKVCERYNIKKKVSPRSQNITKNEKLAIKQLRENNDIIIRPADKGGKTVVMD 415
              DA     ++ E Y  K+ ++  ++ I     LA      N   I     K  +  +  
Sbjct: 960  RGDA----YRLQEDY--KEAIADYTEAIRLKPDLADA---FNGRAITYARQKNYQGAI-- 1008

Query: 416  KADYTQ--KMTSILNSNDYEIIP-----GDPTKTIEE--------SEKYGNLENESGQKH 460
             ADYT+  ++    + N Y         GD    + +         +  GNL      + 
Sbjct: 1009 -ADYTEAIRLDPKYDENYYSRSQVRQELGDLQGALADLNEAVRLDPDDVGNLRERGDIRR 1067

Query: 461  AASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPN--FHV 518
               D+ +A AD  EA ++ P+ AD+Y  RG  Y L  +Y EA+++  + + + P   ++ 
Sbjct: 1068 QLKDYQEAIADYTEAIRLKPDFADAYNARGLAYHLQEKYPEAIKDYSEAVRIYPKPFYYG 1127

Query: 519  ARAQRH 524
             R + H
Sbjct: 1128 NRGEAH 1133



 Score = 59.3 bits (142), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 85/399 (21%), Positives = 172/399 (43%), Gaps = 41/399 (10%)

Query: 144  VVHLHAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPN 203
             V L+    + +A    ++A K+ P+ A+SY++RGQ     G Y  A+ ++++ + L P+
Sbjct: 653  AVPLNELGRYPEALKSGNKAIKIKPDHAESYFRRGQTRRYMGDYRGAIADVNEALRLQPD 712

Query: 204  FHVARAQRHFVVHKMIVPGDRERVEQSLKEFRNFVDTHSNVVEACTLFAQVLVDQEDFDG 263
              +A   R  +  +    GD +     + E       ++    A  +    + DQ+    
Sbjct: 713  LAIAYQFRGTLKSEQ---GDNQGAIADINEALRLQPDNAGAYAARGIVYARMGDQQRL-- 767

Query: 264  AEEYFNRSIRVDPENASLYVHR--AMLMLQARGNVDEAIKLIEKAISIDKSCMFAYET-L 320
              E FN+++ + P++A ++ +R  A  +L+   +  +A++   +AI +     + + T  
Sbjct: 768  -AEDFNKALSLQPDDAWIHQNRGYARFILK---DYQKAVEDYTEAIRLAPESAYQFYTER 823

Query: 321  GTIEVQRGRLEEAVKCFNKALPLARDEAELSHIYSLRDAAIAQMKVCERY--NIKKKVSP 378
            G +  Q+   ++A++ + +AL   R        Y  R  A A++   + +  + KK +S 
Sbjct: 824  GFVRYQQEDYKKAIEDYTEAL---RFRPNYVMAYVRRGEAYAKLGNQQGFTEDFKKALSL 880

Query: 379  RSQNITKNEKLAIKQLRENNDIIIRPADKG------GKTVVMDKAD--YTQKMTSILNSN 430
            +  N        I   R +    ++   KG         +  + AD  Y  +        
Sbjct: 881  QPDNAW------IYTERGDTYFFLKDKQKGIGDYDEAIRLAPELADFYYNWRGNQFYGQE 934

Query: 431  DYEIIPGDPTKTI----EESEKYGNLENESGQKHAASDFTKAFADLDEAEKVDPNVADSY 486
            DY+    D TK I    +E+  Y    N         D+ +A AD  EA ++ P++AD++
Sbjct: 935  DYKAAIVDYTKAIGLKPDEAWYY---YNRGDAYRLQEDYKEAIADYTEAIRLKPDLADAF 991

Query: 487  YQRGQIYCLFGQYEEALRNLDKTIALNPNF---HVARAQ 522
              R   Y     Y+ A+ +  + I L+P +   + +R+Q
Sbjct: 992  NGRAITYARQKNYQGAIADYTEAIRLDPKYDENYYSRSQ 1030



 Score = 56.2 bits (134), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 91/385 (23%), Positives = 148/385 (38%), Gaps = 74/385 (19%)

Query: 165 KVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQRHFVVHKMI-VP-G 222
           KVD ++A    Q G      G YEEA++   + I L P+         F+++  + VP  
Sbjct: 608 KVDKDLA--LRQVGDSAWYSGDYEEAVKAFKEAIELKPD--------DFILYNWLAVPLN 657

Query: 223 DRERVEQSLKEFRNFVDTHSNVVEACTLFAQVLVDQEDFDGAEEYFNRSIRVDPENASLY 282
           +  R  ++LK     +    +  E+     Q      D+ GA    N ++R+ P+ A  Y
Sbjct: 658 ELGRYPEALKSGNKAIKIKPDHAESYFRRGQTRRYMGDYRGAIADVNEALRLQPDLAIAY 717

Query: 283 VHRAMLMLQARGNVDEAIKLIEKAISIDKSCMFAYETLGTIEVQRGRLEEAVKCFNKALP 342
             R  L  + +G+   AI  I +A+ +      AY   G +  + G  +   + FNKAL 
Sbjct: 718 QFRGTLKSE-QGDNQGAIADINEALRLQPDNAGAYAARGIVYARMGDQQRLAEDFNKALS 776

Query: 343 LARDEAELSH-----IYSLRDAAIAQMKVCERYNIKKKVSPRSQNITKNEKLAIKQLREN 397
           L  D+A +        + L+D      K  E Y    +++P S      E+  ++  +E+
Sbjct: 777 LQPDDAWIHQNRGYARFILKD----YQKAVEDYTEAIRLAPESAYQFYTERGFVRYQQED 832

Query: 398 NDIIIRPADKGGKTVVMDKADYTQKMTSILNSNDYEIIPGDPTKTIEESEKYGNLENESG 457
               I               DYT+ +            P      +   E Y  L N+ G
Sbjct: 833 YKKAIE--------------DYTEAL---------RFRPNYVMAYVRRGEAYAKLGNQQG 869

Query: 458 -----------QKHAASDFT-------------KAFADLDEAEKVDPNVADSYYQ-RGQI 492
                      Q   A  +T             K   D DEA ++ P +AD YY  RG  
Sbjct: 870 FTEDFKKALSLQPDNAWIYTERGDTYFFLKDKQKGIGDYDEAIRLAPELADFYYNWRGNQ 929

Query: 493 YCLFGQ--YEEALRNLDKTIALNPN 515
           +  +GQ  Y+ A+ +  K I L P+
Sbjct: 930 F--YGQEDYKAAIVDYTKAIGLKPD 952



 Score = 54.7 bits (130), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 41/143 (28%), Positives = 67/143 (46%), Gaps = 8/143 (5%)

Query: 65   LSKAKRAFEHEDYLTAIRHCTEEIESTSSNHTKALARLLRATVYIFTSQSTKAIEDLTQL 124
            L +   +++ EDY TAI    E I     N   A A  LR   Y       +AI+D TQ 
Sbjct: 1228 LGRGIASYKREDYQTAIAEYNEAIRLAPQN---AFAYNLRGNAYFAQENYQQAIKDYTQA 1284

Query: 125  VEDTSVDPKIKVNAHIKRAVVHLHAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLF 184
            +    ++PK  V A+  R  ++ +   ++  A +D  EA ++ P+ AD Y++RG      
Sbjct: 1285 IR---LNPKFAV-AYSNRGNIY-YELEEYKSAVSDYTEAIRIKPDDADFYFKRGDARDQS 1339

Query: 185  GQYEEALRNLDKTIALNPNFHVA 207
              Y  A+ +  + I L P++  A
Sbjct: 1340 EDYSGAIADYTEAIRLKPDYTTA 1362



 Score = 54.3 bits (129), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 35/152 (23%), Positives = 72/152 (47%), Gaps = 7/152 (4%)

Query: 136  VNAHIKRAVVHLHAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLD 195
            V+AH+ R +   +   D+  A A+ +EA ++ P  A +Y  RG  Y     Y++A+++  
Sbjct: 1224 VDAHLGRGIAS-YKREDYQTAIAEYNEAIRLAPQNAFAYNLRGNAYFAQENYQQAIKDYT 1282

Query: 196  KTIALNPNFHVARAQRHFVVHKMIVPGDRERVEQSLKEFRNFVDTHSNVVEACTLFAQVL 255
            + I LNP F VA + R  + +++      E  + ++ ++   +    +  +         
Sbjct: 1283 QAIRLNPKFAVAYSNRGNIYYEL------EEYKSAVSDYTEAIRIKPDDADFYFKRGDAR 1336

Query: 256  VDQEDFDGAEEYFNRSIRVDPENASLYVHRAM 287
               ED+ GA   +  +IR+ P+  + Y +R +
Sbjct: 1337 DQSEDYSGAIADYTEAIRLKPDYTTAYYYRGI 1368


>gi|218780050|ref|YP_002431368.1| hypothetical protein Dalk_2207 [Desulfatibacillum alkenivorans
           AK-01]
 gi|218761434|gb|ACL03900.1| Tetratricopeptide TPR_2 repeat protein [Desulfatibacillum
           alkenivorans AK-01]
          Length = 661

 Score = 68.9 bits (167), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 103/461 (22%), Positives = 188/461 (40%), Gaps = 53/461 (11%)

Query: 104 RATVYIFTSQSTKAIEDLTQLVEDTSVDPKIKVNAHIKRAVVHLHAASDFTKAFADLDEA 163
           R   Y  T    +A++D TQ +   +  P     A+++RA  +  A  D+ KA AD D A
Sbjct: 87  RGGAYARTGDHEQAVQDFTQAINMIARFPA----AYVQRAKSY-AALGDYEKARADFDAA 141

Query: 164 EKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQRHFVVHKMIVPGD 223
             + P+ A  Y +        G Y +AL    K + + P+     A    ++ K     D
Sbjct: 142 IALLPDQAWPYREIAGFCSQQGNYGQALVYYLKALEIEPD----NAALMCLMGK--AQAD 195

Query: 224 RERVEQSLKEFRNFVDTHSNVVEACTLFAQVLVDQEDFDGAEEYFNRSIRVDPENASLYV 283
               E+ ++   N   +     E       +   + D   A E + +++ +DP +     
Sbjct: 196 AGYPEKGIQTCLNAAKSDPQSAEPYLTMGLIYSKEGDHYAAVEQYTKAMVLDPGSNQALG 255

Query: 284 HRAMLMLQARGNVDEAIKLIEKAISIDKSCMFAYETLGTIEVQRGRLEEAVKCFNKALPL 343
            RA L   A G  D+A+   +K ++ D      Y  LG+I  QR   E+A + + KAL +
Sbjct: 256 RRA-LAYAAAGEYDKALADAQKVVADDPDKALGYYYLGSIYTQRNEPEKAYESYTKALEI 314

Query: 344 ARDEAEL----SHIYSLR----------DAAIAQMK-----VCERYNIKKKVSPRSQNIT 384
             +E  L    +H   L+          D AIA          ER NI + +  + + + 
Sbjct: 315 TPNEPALYLGQAHAARLKGDYDLALKNADEAIALFPGKDSLYFERGNIYEIMGQKPKALE 374

Query: 385 KNEKLAIKQLRENNDIIIRPADKGGKTVVMDKADYTQKMTSILNSNDYEIIP-------- 436
              K A++   ++     R      +++   KA   +  + ++  N+  ++         
Sbjct: 375 DYLK-AVELNPQSVQGHFRLGVNYAQSLANQKA--YEHFSKVIEVNENHVMAYAWRAVIN 431

Query: 437 ---GDPTKTIEESEKYGNLENES-------GQKHAASDFTKA-FADLDEAEKVDPNVADS 485
              G   + + +SEK   L+++S       G  +      +A    LD+A +++P  A +
Sbjct: 432 ARLGKKAEGVSDSEKAVALKSDSPLVLYFTGTAYGLLKMPEAAIRQLDKAVQLNPEYALA 491

Query: 486 YYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQRHFV 526
           Y +RG+ +    QY  A+R+L+K +  NP+   A  Q  + 
Sbjct: 492 YMERGKAHMQLRQYRAAVRDLEKAVQYNPDLCGAYLQAAYA 532



 Score = 68.6 bits (166), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 101/425 (23%), Positives = 156/425 (36%), Gaps = 86/425 (20%)

Query: 133 KIKVNAHIKRAVVHLHAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALR 192
           K+   A+   A V L   +   +A  DL  A K+ P+ A   +QRG  Y   G +E+A++
Sbjct: 43  KMLAQAYSDSARVALQDPATMDQAIEDLSAAAKLSPDNAVLLFQRGGAYARTGDHEQAVQ 102

Query: 193 NLDKTIALNPNFHVARAQRHFVVHKMIVPGDRERVEQSLKEFRNFVDTHSNVVEACTLFA 252
           +  + I +   F  A  QR          GD E+      +F   +    +        A
Sbjct: 103 DFTQAINMIARFPAAYVQR---AKSYAALGDYEKAR---ADFDAAIALLPDQAWPYREIA 156

Query: 253 QVLVDQEDFDGAEEYFNRSIRVDPENASLYVHRAMLMLQAR---GNVDEAIKLIEKAISI 309
                Q ++  A  Y+ +++ ++P+NA+L      LM +A+   G  ++ I+    A   
Sbjct: 157 GFCSQQGNYGQALVYYLKALEIEPDNAALMC----LMGKAQADAGYPEKGIQTCLNAAKS 212

Query: 310 DKSCMFAYETLGTIEVQRGRLEEAVKCFNKALPLARDEAELSHIYSLRDAAIAQMKVCER 369
           D      Y T+G I  + G    AV+ + KA+ L                          
Sbjct: 213 DPQSAEPYLTMGLIYSKEGDHYAAVEQYTKAMVL-------------------------- 246

Query: 370 YNIKKKVSPRSQNITKNEKLAIKQLRENNDIIIRPADKGGKTVVMDKAD----------- 418
                   P S        LA     E +  +   AD   + VV D  D           
Sbjct: 247 -------DPGSNQALGRRALAYAAAGEYDKAL---AD--AQKVVADDPDKALGYYYLGSI 294

Query: 419 YTQKMTSILNSNDY----EIIPGDPTKTIEESEKYGNLENESGQKHAA---SDFTKAFAD 471
           YTQ+         Y    EI P +P   +             GQ HAA    D+  A  +
Sbjct: 295 YTQRNEPEKAYESYTKALEITPNEPALYL-------------GQAHAARLKGDYDLALKN 341

Query: 472 LDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQRHFVWTSTL 531
            DEA  + P     Y++RG IY + GQ  +AL +  K + LNP       Q HF      
Sbjct: 342 ADEAIALFPGKDSLYFERGNIYEIMGQKPKALEDYLKAVELNPQ----SVQGHFRLGVNY 397

Query: 532 AELMA 536
           A+ +A
Sbjct: 398 AQSLA 402



 Score = 52.0 bits (123), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 63/249 (25%), Positives = 101/249 (40%), Gaps = 50/249 (20%)

Query: 97  KALARLLRATVYIFTSQSTKAIEDLTQLVEDTSVDPKIKVN-AHIKRAVVHLHAASDFTK 155
           KAL      ++Y   ++  KA E  T+ +E T  +P + +  AH  R         D+  
Sbjct: 284 KALGYYYLGSIYTQRNEPEKAYESYTKALEITPNEPALYLGQAHAARL------KGDYDL 337

Query: 156 AFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQRHFVV 215
           A  + DEA  + P     Y++RG IY + GQ  +AL +  K + LNP       Q H   
Sbjct: 338 ALKNADEAIALFPGKDSLYFERGNIYEIMGQKPKALEDYLKAVELNPQ----SVQGH--- 390

Query: 216 HKMIVPGDRERVEQSLKEFRNFVDTHSNVVEACTLFAQVLVDQEDFDGAEEYFNRSIRVD 275
                             FR  V+           +AQ L +Q+ +    E+F++ I V+
Sbjct: 391 ------------------FRLGVN-----------YAQSLANQKAY----EHFSKVIEVN 417

Query: 276 PENASLYVHRAMLMLQAR-GNVDEAIKLIEKAISIDKSCMFAYETLGTIEVQRGRLEEAV 334
             +   Y  RA  ++ AR G   E +   EKA+++           GT        E A+
Sbjct: 418 ENHVMAYAWRA--VINARLGKKAEGVSDSEKAVALKSDSPLVLYFTGTAYGLLKMPEAAI 475

Query: 335 KCFNKALPL 343
           +  +KA+ L
Sbjct: 476 RQLDKAVQL 484



 Score = 50.4 bits (119), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 55/231 (23%), Positives = 98/231 (42%), Gaps = 17/231 (7%)

Query: 80  AIRHCTEEIESTSSNHTKALARLLRATVYIFTSQSTKAIEDLTQLVEDTSVDPKIKVNAH 139
           A  H ++ IE  + NH  A A   RA +     +  + + D  + V   S  P +     
Sbjct: 406 AYEHFSKVIE-VNENHVMAYA--WRAVINARLGKKAEGVSDSEKAVALKSDSPLVLYFTG 462

Query: 140 IKRAVVHLHAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIA 199
               ++ +  A     A   LD+A +++P  A +Y +RG+ +    QY  A+R+L+K + 
Sbjct: 463 TAYGLLKMPEA-----AIRQLDKAVQLNPEYALAYMERGKAHMQLRQYRAAVRDLEKAVQ 517

Query: 200 LNPNFHVARAQRHFVVHKMIVPGDRERVEQSLKEFRNFVDTHSNVVEACTLFAQVL---V 256
            NP+   A  Q  +    M   GD  +    L +   ++D   ++ E   L A VL    
Sbjct: 518 YNPDLCGAYLQAAYAARYM---GDDLKTVDWLSQ---YLDCKPDMEEPSRLLAWVLSVSF 571

Query: 257 DQEDFDGAEEYFNRSIRVDPENASLYVHRAMLMLQARGNVDEAIKLIEKAI 307
           D +  DGA         V+ +  + Y+      L   G+  +AI + ++A+
Sbjct: 572 DDQVRDGARALEIAQGLVNKKKPASYLETLAAALAETGDFQQAIAVQQRAL 622


>gi|428319714|ref|YP_007117596.1| Tetratricopeptide TPR_1 repeat-containing protein [Oscillatoria
           nigro-viridis PCC 7112]
 gi|428243394|gb|AFZ09180.1| Tetratricopeptide TPR_1 repeat-containing protein [Oscillatoria
           nigro-viridis PCC 7112]
          Length = 548

 Score = 68.9 bits (167), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 49/187 (26%), Positives = 86/187 (45%), Gaps = 9/187 (4%)

Query: 165 KVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQRHFVVHKMIVPGDR 224
           +V+   A +Y+ RG +    G+ EEA     +   LNP+F         V+ K+   G R
Sbjct: 6   QVNEETASNYFHRGNLLKQSGKLEEAAAAYQRCTELNPDFSWYHHNLGEVLAKL---GQR 62

Query: 225 ERVEQSLKEFRNFVDTHSNVVEACTLFAQVLVDQEDFDGAEEYFNRSIRVDPENASLYVH 284
           +  E+S   +R   + + N   +     +VL  Q + + A   + +++ + P+    Y  
Sbjct: 63  DGAEKS---YRRACELNQNSAWSWHNLGEVLEQQGNLEEAVAAYRKAVEIYPDFYEFYNS 119

Query: 285 RAM-LMLQARGNVDEAIKLIEKAISIDKSCMFAYETLGTIEVQRGRLEEAVKCFNKALPL 343
               L LQ  G +DE+I  + +AI +D      Y+ L     ++GRLEE + C  +A+ L
Sbjct: 120 LGKGLCLQ--GQLDESISCLRRAIELDSESALPYQNLWEALARQGRLEEGIDCLRRAIDL 177

Query: 344 ARDEAEL 350
              + EL
Sbjct: 178 NPGDGEL 184



 Score = 55.8 bits (133), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 49/208 (23%), Positives = 84/208 (40%), Gaps = 18/208 (8%)

Query: 147 LHAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHV 206
           L   ++  +A     +A ++ P+    YY+ G      GQ+EEA+    K   L P   +
Sbjct: 192 LQGKNELAEAVGYYRKAIQLKPDFHWIYYKLGTALSAQGQWEEAIAAYSKAAELEPGSAI 251

Query: 207 ARAQRHFVVHKMIVPGDRERVEQSLKEFRNFVDTHSNVVEACTLFAQVLVDQEDFDGAEE 266
                H++ H + +    +R ++++  +R  +D   N           L   + ++ A  
Sbjct: 252 V---HHYLGHTLSIV---QRWDEAIASYRKALDLVPNAAVIYQHLGDALAKLQKWEQAVG 305

Query: 267 YFNRSIRVDPENASLYVHRAMLMLQARGNVDEAIKLIEKAISIDKSCMFAYETLGTIEVQ 326
            + +S+  +P +     H    + Q  G  DEAI    KA+ I       +  LG    +
Sbjct: 306 SYRKSVEFEPNSLEAQDHLGFALYQL-GRYDEAISAYRKALEIAPDSDVVHCHLGEALQR 364

Query: 327 RGR-----------LEEAVKCFNKALPL 343
           R R           LEEAVKC+ KA  L
Sbjct: 365 RARVQPLQKDVELDLEEAVKCYRKASKL 392



 Score = 50.1 bits (118), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 43/188 (22%), Positives = 85/188 (45%), Gaps = 7/188 (3%)

Query: 165 KVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQRHFVVHKMIVPGDR 224
           +++ N A S++  G++    G  EEA+    K + + P+F+      + +   + + G  
Sbjct: 74  ELNQNSAWSWHNLGEVLEQQGNLEEAVAAYRKAVEIYPDFYEFY---NSLGKGLCLQG-- 128

Query: 225 ERVEQSLKEFRNFVDTHSNVVEACTLFAQVLVDQEDFDGAEEYFNRSIRVDPENASLYVH 284
            ++++S+   R  ++  S          + L  Q   +   +   R+I ++P +  LY+ 
Sbjct: 129 -QLDESISCLRRAIELDSESALPYQNLWEALARQGRLEEGIDCLRRAIDLNPGDGELYLK 187

Query: 285 RAMLMLQARGNVDEAIKLIEKAISIDKSCMFAYETLGTIEVQRGRLEEAVKCFNKALPLA 344
            A   LQ +  + EA+    KAI +     + Y  LGT    +G+ EEA+  ++KA  L 
Sbjct: 188 LAE-ALQGKNELAEAVGYYRKAIQLKPDFHWIYYKLGTALSAQGQWEEAIAAYSKAAELE 246

Query: 345 RDEAELSH 352
              A + H
Sbjct: 247 PGSAIVHH 254


>gi|434399223|ref|YP_007133227.1| Tetratricopeptide TPR_1 repeat-containing protein [Stanieria
           cyanosphaera PCC 7437]
 gi|428270320|gb|AFZ36261.1| Tetratricopeptide TPR_1 repeat-containing protein [Stanieria
           cyanosphaera PCC 7437]
          Length = 280

 Score = 68.6 bits (166), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 55/231 (23%), Positives = 107/231 (46%), Gaps = 32/231 (13%)

Query: 147 LHAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPN--- 203
           L    +F ++     +A K+ PN      +  +IY     + EA++   + I LNP+   
Sbjct: 21  LKEQGNFEESIQSYQQAIKIKPNYTQPLPKLAEIYESQQNWSEAVKCYQRMIGLNPSNYA 80

Query: 204 --FHVARA-QRHFVVHKMI------------VP-------GD-----RERVEQSLKEFRN 236
               +A+  Q+   +H  I            +P       GD     ++ +E ++  ++ 
Sbjct: 81  PYLKLAKVLQKQNKIHGAIAAYQEAIELKPELPARIYKQLGDLLLQEKDEIESAINYYQK 140

Query: 237 FVDTHSNVVEACTL-FAQVLVDQEDFDGAEEYFNRSIRVDPENASLYVHRAMLMLQARGN 295
            +  +S       L +A +L+ +E FD A  Y+ + I + P++A  Y+     +L+ +G 
Sbjct: 141 ALKINSEWNSGFYLKYANILLKKEHFDDAIAYYQKVIELKPDSAKPYLFLGDALLE-KGQ 199

Query: 296 VDEAIKLIEKAISIDKSCMFAYETLGTIEVQRGRLEEAVKCFNKALPLARD 346
           +DEA+   +KAI +    + AY+ LG I  ++  L+ A++C+ KA+ L  D
Sbjct: 200 LDEAMANYQKAIQLQPDFVVAYKKLGDIFQEKDNLDTAIRCYQKAIELKPD 250


>gi|78188282|ref|YP_378620.1| TPR repeat-containing protein [Chlorobium chlorochromatii CaD3]
 gi|78170481|gb|ABB27577.1| TPR repeat [Chlorobium chlorochromatii CaD3]
          Length = 1827

 Score = 68.6 bits (166), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 55/212 (25%), Positives = 103/212 (48%), Gaps = 7/212 (3%)

Query: 145 VHLHAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNF 204
           V LH +    +A A   +  K  P+  D+ +  G ++    +Y +AL  L++ IAL P F
Sbjct: 290 VTLHQSGKHNEAEACYQQILKQQPHHIDALHLLGVLFYHKKEYSKALDLLNQAIALKPTF 349

Query: 205 HVARAQRHFVVHKMIVPGDRERVEQSLKEFRNFVDTHSNVVEACTLFAQVLVDQEDFDGA 264
             A + R  V+ ++      +R +++L  +   ++   N   A    A +L + + F  A
Sbjct: 350 TEAYSNRGAVLKEL------KRFDEALASYNKALELKENYAAAWYNRANLLKEWKQFSEA 403

Query: 265 EEYFNRSIRVDPENASLYVHRAMLMLQARGNVDEAIKLIEKAISIDKSCMFAYETLGTIE 324
            E +N++I   P     Y +R +++ + +   D A     +AI++  + + AY   GT+ 
Sbjct: 404 IESYNKAIEFQPNYPEAYSNRGVVLKELK-QFDAAFASYNQAIALKPTYVEAYSNKGTVL 462

Query: 325 VQRGRLEEAVKCFNKALPLARDEAELSHIYSL 356
            +  +L+ A++ FNKA+ L  D AE+    SL
Sbjct: 463 KELKQLDAAIESFNKAIALKPDYAEVQWNKSL 494



 Score = 66.6 bits (161), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 63/262 (24%), Positives = 117/262 (44%), Gaps = 30/262 (11%)

Query: 84   CTEEIESTSSNHTKALARLLRATVYIFTSQS-TKAIEDLTQLVEDTSVDPKIKVNAHIKR 142
            C ++I     NH  AL  L    V  F  ++ ++++E L Q +   S       +A+  R
Sbjct: 1297 CYQKILQLQPNHADALHLL---GVLSFQKENYSQSLELLNQAIAIKSD----FASAYFNR 1349

Query: 143  AVVHLHAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNP 202
             +V L   S F KA  D ++A +  P  A +Y+ RG +     Q++ AL++ +K IAL P
Sbjct: 1350 GLV-LKNLSQFEKAIEDFNKAIEQKPEYASAYHSRGTVQKELKQFDAALKSYEKAIALKP 1408

Query: 203  NFHVARAQRHFVVHKMIVPGDRERVEQSLKEFRNFVDTHSNVVEACTLFAQ-------VL 255
            ++  A               +R    Q LK F   +D+++  +     +A+       V 
Sbjct: 1409 DYTEAYC-------------NRGNALQLLKRFNEAIDSYNKAIALKPQYAEAYSNRGVVF 1455

Query: 256  VDQEDFDGAEEYFNRSIRVDPENASLYVHRAMLMLQARGNVDEAIKLIEKAISIDKSCMF 315
             + ++ D + + FN++I +  + A  Y +R ++  + +  +D A+    KAI + K    
Sbjct: 1456 RELKELDTSLDNFNKAIELKADYAEAYSNRGVVFRELK-MLDNALADFNKAIELKKDYAI 1514

Query: 316  AYETLGTIEVQRGRLEEAVKCF 337
            AY     + +  G   E  +C+
Sbjct: 1515 AYWNKSLVLLLLGNFAEGWQCY 1536



 Score = 60.1 bits (144), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 51/221 (23%), Positives = 104/221 (47%), Gaps = 14/221 (6%)

Query: 84  CTEEIESTSSNHTKALARLLRATVYIFTSQSTKAIEDLTQLVEDTSVDPKIKVNAHIKRA 143
           C ++I     +H  AL  L    ++    + +KA++ L Q +   ++ P     A+  R 
Sbjct: 304 CYQQILKQQPHHIDALHLL--GVLFYHKKEYSKALDLLNQAI---ALKPTF-TEAYSNRG 357

Query: 144 VVHLHAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPN 203
            V L     F +A A  ++A ++  N A ++Y R  +   + Q+ EA+ + +K I   PN
Sbjct: 358 AV-LKELKRFDEALASYNKALELKENYAAAWYNRANLLKEWKQFSEAIESYNKAIEFQPN 416

Query: 204 FHVARAQRHFVVHKMIVPGDRERVEQSLKEFRNFVDTHSNVVEACTLFAQVLVDQEDFDG 263
           +  A + R  V+ ++      ++ + +   +   +      VEA +    VL + +  D 
Sbjct: 417 YPEAYSNRGVVLKEL------KQFDAAFASYNQAIALKPTYVEAYSNKGTVLKELKQLDA 470

Query: 264 AEEYFNRSIRVDPENASLYVHRAMLMLQARGNVDEAIKLIE 304
           A E FN++I + P+ A +  ++++++L + GN  +   L E
Sbjct: 471 AIESFNKAIALKPDYAEVQWNKSLVLLLS-GNFIDGWMLYE 510



 Score = 47.8 bits (112), Expect = 0.016,   Method: Compositional matrix adjust.
 Identities = 45/192 (23%), Positives = 87/192 (45%), Gaps = 13/192 (6%)

Query: 234  FRNFVDTHSNVVEACTLFAQVLVDQEDFDGAEEYFNRSIRVDPENASLYVHRAMLMLQAR 293
            ++  +    N  +A  L   +   +E++  + E  N++I +  + AS Y +R  L+L+  
Sbjct: 1298 YQKILQLQPNHADALHLLGVLSFQKENYSQSLELLNQAIAIKSDFASAYFNRG-LVLKNL 1356

Query: 294  GNVDEAIKLIEKAISIDKSCMFAYETLGTIEVQRGRLEEAVKCFNKALPLARDEAELSHI 353
               ++AI+   KAI        AY + GT++ +  + + A+K + KA+ L  D  E    
Sbjct: 1357 SQFEKAIEDFNKAIEQKPEYASAYHSRGTVQKELKQFDAALKSYEKAIALKPDYTE---A 1413

Query: 354  YSLRDAAIAQMK----VCERYNIKKKVSPRSQNITKNEKLAIKQLRENNDIIIRPADKGG 409
            Y  R  A+  +K      + YN    + P+      N  +  ++L+E +  +    D   
Sbjct: 1414 YCNRGNALQLLKRFNEAIDSYNKAIALKPQYAEAYSNRGVVFRELKELDTSL----DNFN 1469

Query: 410  KTVVMDKADYTQ 421
            K + + KADY +
Sbjct: 1470 KAIEL-KADYAE 1480



 Score = 45.8 bits (107), Expect = 0.062,   Method: Compositional matrix adjust.
 Identities = 30/115 (26%), Positives = 58/115 (50%), Gaps = 1/115 (0%)

Query: 234 FRNFVDTHSNVVEACTLFAQVLVDQEDFDGAEEYFNRSIRVDPENASLYVHRAMLMLQAR 293
           ++N +    N V+A  L   V   +E ++ A    N++I ++ + AS Y +R  L+ +  
Sbjct: 834 YKNIIQLQPNHVDALHLLGVVAFQKEQYNEALNLLNQAIALNTDFASAYFNRG-LVFKNL 892

Query: 294 GNVDEAIKLIEKAISIDKSCMFAYETLGTIEVQRGRLEEAVKCFNKALPLARDEA 348
            + D+A++  ++A+ +  +   AY   G I  + G +  A+  +N AL L  D A
Sbjct: 893 YHFDKALEDFDRALRLKPNYAEAYHKRGNILKELGLITAALSSYNNALALKADYA 947



 Score = 41.6 bits (96), Expect = 1.2,   Method: Compositional matrix adjust.
 Identities = 21/61 (34%), Positives = 34/61 (55%)

Query: 463  SDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQ 522
            S F KA  D ++A +  P  A +Y+ RG +     Q++ AL++ +K IAL P++  A   
Sbjct: 1357 SQFEKAIEDFNKAIEQKPEYASAYHSRGTVQKELKQFDAALKSYEKAIALKPDYTEAYCN 1416

Query: 523  R 523
            R
Sbjct: 1417 R 1417



 Score = 40.4 bits (93), Expect = 2.6,   Method: Compositional matrix adjust.
 Identities = 39/176 (22%), Positives = 76/176 (43%), Gaps = 13/176 (7%)

Query: 122 TQLVEDTSVDPKIKVNAHIKRAV-------VHLHAASDFTKAFADLDEAEKVDPNVADSY 174
           T L +  + D K+ V+    +A+       + LH +    +A        ++ PN  D+ 
Sbjct: 789 TDLYDYFTTDNKVAVSHKATKAIQALLKEAIKLHQSGKQNEAAICYKNIIQLQPNHVDAL 848

Query: 175 YQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQRHFVVHKMIVPGDRERVEQSLKEF 234
           +  G +     QY EAL  L++ IALN +F  A   R  V   +         +++L++F
Sbjct: 849 HLLGVVAFQKEQYNEALNLLNQAIALNTDFASAYFNRGLVFKNLY------HFDKALEDF 902

Query: 235 RNFVDTHSNVVEACTLFAQVLVDQEDFDGAEEYFNRSIRVDPENASLYVHRAMLML 290
              +    N  EA      +L +      A   +N ++ +  + A +Y+ +A+++L
Sbjct: 903 DRALRLKPNYAEAYHKRGNILKELGLITAALSSYNNALALKADYAGVYLDKAIILL 958



 Score = 39.7 bits (91), Expect = 4.3,   Method: Compositional matrix adjust.
 Identities = 34/122 (27%), Positives = 53/122 (43%), Gaps = 9/122 (7%)

Query: 84  CTEEIESTSSNHTKALARLLRATVYIFTSQSTKAIEDLTQLVE-DTSVDPKIKVNAHIKR 142
           C + I     NH  AL  L    V     Q  +A+  L Q +  +T        +A+  R
Sbjct: 833 CYKNIIQLQPNHVDALHLL--GVVAFQKEQYNEALNLLNQAIALNTDF-----ASAYFNR 885

Query: 143 AVVHLHAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNP 202
            +V       F KA  D D A ++ PN A++Y++RG I    G    AL + +  +AL  
Sbjct: 886 GLV-FKNLYHFDKALEDFDRALRLKPNYAEAYHKRGNILKELGLITAALSSYNNALALKA 944

Query: 203 NF 204
           ++
Sbjct: 945 DY 946


>gi|414078778|ref|YP_006998096.1| hypothetical protein ANA_C13625 [Anabaena sp. 90]
 gi|413972194|gb|AFW96283.1| TPR repeat-containing protein [Anabaena sp. 90]
          Length = 383

 Score = 68.6 bits (166), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 70/281 (24%), Positives = 121/281 (43%), Gaps = 49/281 (17%)

Query: 63  DLLSKAKRAFEHEDYLTAIRHCTEEIESTSSNHTKALARLLRATVYIFTSQSTKAIEDLT 122
           D L +A   +E  DY  AI    E I  T  N+++AL    R   Y     +  AI+D  
Sbjct: 96  DFLVQAADKYEIGDYRGAILAYDEVIRLTP-NNSEAL--FYRGMAYYNLGDNQAAIQDYN 152

Query: 123 QLVEDTSVDPKIKVNAHIKRAVVHLHAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYC 182
           Q+++   ++P    NA+I R  +   A  D   A  D ++A K++PN A++Y  RG    
Sbjct: 153 QVLK---INPN-DANAYINRGNLR-DALGDKQAAIQDYNQALKINPNYAEAYLNRGLTRD 207

Query: 183 LFGQYEEALRNLDKTIALNPNFHVARAQRHFVVHKMIVPGDRERVEQSLKEFRNFVDTHS 242
             G  + A+ + ++ + +NPN  V+                          +RN  +   
Sbjct: 208 DLGDKKGAIEDYNQALKINPNDAVS--------------------------YRNRGNARD 241

Query: 243 NVVEACTLFAQVLVDQEDFDGAEEYFNRSIRVDPENASLYVHRAMLMLQARGNVDEAIKL 302
                         D  D  GA E +N++++++P +A  Y++R  L   A G+   AI+ 
Sbjct: 242 --------------DLGDKKGAIEDYNQALKINPNDAVSYLNRGNLR-DALGDKQAAIQD 286

Query: 303 IEKAISIDKSCMFAYETLGTIEVQRGRLEEAVKCFNKALPL 343
             +A+ I+ +   AY   G      G  +  ++ FN+AL +
Sbjct: 287 YNQALKINPNYAEAYLNRGVARDTLGDKQAVIQDFNQALKI 327



 Score = 63.2 bits (152), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 70/288 (24%), Positives = 116/288 (40%), Gaps = 36/288 (12%)

Query: 260 DFDGAEEYFNRSIRVDPENASLYVHRAMLMLQARGNVDEAIKLIEKAISIDKSCMFAYET 319
           D+ GA   ++  IR+ P N+    +R M      G+   AI+   + + I+ +   AY  
Sbjct: 109 DYRGAILAYDEVIRLTPNNSEALFYRGMAYYNL-GDNQAAIQDYNQVLKINPNDANAYIN 167

Query: 320 LGTIEVQRGRLEEAVKCFNKALPLARDEAELSHIYSL-RDAAIAQMKVCERYNIKKKVSP 378
            G +    G  + A++ +N+AL +  + AE      L RD    +    E YN   K++P
Sbjct: 168 RGNLRDALGDKQAAIQDYNQALKINPNYAEAYLNRGLTRDDLGDKKGAIEDYNQALKINP 227

Query: 379 RSQNITKNEKLAIKQLRENNDIIIRPADKGGKTVVMDKADYTQKMTSILNSNDYEIIPGD 438
                 +N   A   L           DK G        DY Q +         +I P D
Sbjct: 228 NDAVSYRNRGNARDDL----------GDKKGAI-----EDYNQAL---------KINPND 263

Query: 439 PTKTIEESEKYGNLENESGQKHAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQ 498
               +      GNL +  G K AA        D ++A K++PN A++Y  RG      G 
Sbjct: 264 AVSYLNR----GNLRDALGDKQAA------IQDYNQALKINPNYAEAYLNRGVARDTLGD 313

Query: 499 YEEALRNLDKTIALNPNFHVARAQRHFVWTSTLAELMAFSDEFMIPKI 546
            +  +++ ++ + +NPN+  A   R   + +   +  A SD     KI
Sbjct: 314 KQAVIQDFNQALKINPNYAKAYYNRGNAYATLGDKFQAISDFQQAAKI 361



 Score = 41.6 bits (96), Expect = 1.0,   Method: Compositional matrix adjust.
 Identities = 31/122 (25%), Positives = 53/122 (43%), Gaps = 7/122 (5%)

Query: 151 SDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQ 210
            D   A  D ++A K++PN A SY  RG +    G  + A+++ ++ + +NPN+  A   
Sbjct: 244 GDKKGAIEDYNQALKINPNDAVSYLNRGNLRDALGDKQAAIQDYNQALKINPNYAEAYLN 303

Query: 211 RHFVVHKMIVPGDRERV----EQSLKEFRNFVDTHSNVVEACTLFAQVLVDQEDFDGAEE 266
           R      +   GD++ V     Q+LK   N+   + N   A            DF  A +
Sbjct: 304 RGVARDTL---GDKQAVIQDFNQALKINPNYAKAYYNRGNAYATLGDKFQAISDFQQAAK 360

Query: 267 YF 268
            +
Sbjct: 361 IY 362



 Score = 40.8 bits (94), Expect = 2.0,   Method: Compositional matrix adjust.
 Identities = 26/95 (27%), Positives = 49/95 (51%), Gaps = 5/95 (5%)

Query: 117 AIEDLTQLVEDTSVDPKIKVNAHIKRAVVHLHAASDFTKAFADLDEAEKVDPNVADSYYQ 176
           AIED  Q ++   ++P   V +++ R  +   A  D   A  D ++A K++PN A++Y  
Sbjct: 249 AIEDYNQALK---INPNDAV-SYLNRGNLR-DALGDKQAAIQDYNQALKINPNYAEAYLN 303

Query: 177 RGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQR 211
           RG      G  +  +++ ++ + +NPN+  A   R
Sbjct: 304 RGVARDTLGDKQAVIQDFNQALKINPNYAKAYYNR 338


>gi|431797887|ref|YP_007224791.1| hypothetical protein Echvi_2535 [Echinicola vietnamensis DSM 17526]
 gi|430788652|gb|AGA78781.1| tetratricopeptide repeat protein [Echinicola vietnamensis DSM
           17526]
          Length = 315

 Score = 68.6 bits (166), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 58/261 (22%), Positives = 117/261 (44%), Gaps = 31/261 (11%)

Query: 136 VNAHIKRAVVHLHAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLD 195
           V+A+  R + +    SDF +A +D ++A  +D    D+YY RG  +   G    AL + D
Sbjct: 65  VDAYYNRGIAYTKT-SDFQRAISDFNKAISIDHQYVDAYYHRGIAHFDNGANYNALSDAD 123

Query: 196 KTIALNPNFHVARAQRHFVVHKMIVPGDRERVEQSLKEFRNFVDTHSNVVEACTLFAQVL 255
           + IAL P+ +     R  V   +         E +L+ F   ++    + +     A + 
Sbjct: 124 QLIALAPDDYRGYFLRGLVQETL------GNYETALQAFDQAIEHDQTITDLYVNKATIQ 177

Query: 256 VDQEDFDGAEEYFNRSIRVDPENASLYVHRAMLMLQARGNVDEAIKLIEKAISIDKSCMF 315
             ++D+  A    N++  ++PE  +++  R+++  + R  +D A+K + KAI ++    +
Sbjct: 178 YYRKDYKSATTNLNKAESLNPEEPNIFNLRSLIAFE-RDAIDSALKWVNKAIDLNAGQAY 236

Query: 316 AYETLGTIEVQRGRLEEAVKCFNKALPLARDEAELSHIYSLRDAAIAQMKVCERYNIKKK 375
            Y   G   +  G++E  ++  N +L     +    ++++LR+  I              
Sbjct: 237 FYNNRGLYYLFDGQMERGIEDINFSL-----KQNSKNLFALRNKGIYYY----------- 280

Query: 376 VSPRSQNITKNEKLAIKQLRE 396
                  ++ N+ LAIK L+E
Sbjct: 281 -------LSGNKPLAIKYLQE 294


>gi|225851470|ref|YP_002731704.1| TPR Domain containing protein [Persephonella marina EX-H1]
 gi|225644946|gb|ACO03132.1| TPR Domain containing protein [Persephonella marina EX-H1]
          Length = 345

 Score = 68.6 bits (166), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 57/247 (23%), Positives = 111/247 (44%), Gaps = 13/247 (5%)

Query: 105 ATVYIFTSQSTKAIEDLTQLVEDTSVDPKIKVNAHIKRAVVHLHAASDFTKAFADLDEAE 164
            ++Y+      KA++ L + VE      K K   +            D  KA     +A 
Sbjct: 67  GSIYLEEGNPEKAVKYLKKAVE------KGKKAEYFNDLGYAYFLKGDPEKAIKCYTKAI 120

Query: 165 KVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQRHFVVHKMIVPGDR 224
           ++ P++A +YY RG  +   G Y+EA++N ++ IALNP          +  +  IV   +
Sbjct: 121 EIKPDLAVAYYNRGLAFKKMGDYDEAVKNYNRAIALNPE------DPDYYYNLGIVYRIK 174

Query: 225 ERVEQSLKEFRNFVDTHSNVVEACTLFAQVLVDQEDFDGAEEYFNRSIRVDPENASLYVH 284
             +++++  ++  ++ +            V  D +D+  A E + +++ ++P     + +
Sbjct: 175 GDLQKAVNCYKKAIEINPENENYYNNLGNVYYDMKDYKKAVECYKKAVEINPLFFLGWQN 234

Query: 285 RAMLMLQARGNVDEAIKLIEKAISIDKSCMFAYETLGTIEVQRGRLEEAVKCFNKALPLA 344
                L   G+ ++A+K  +KA+ IDK     Y  +G    + GR +EA+K + KA  + 
Sbjct: 235 LGNTYLDM-GDYEKAVKAFKKALKIDKRSAECYMDMGIALKELGRYDEALKAYEKAEQIN 293

Query: 345 RDEAELS 351
            D   LS
Sbjct: 294 PDLKALS 300



 Score = 60.5 bits (145), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 49/202 (24%), Positives = 97/202 (48%), Gaps = 13/202 (6%)

Query: 142 RAVVHLHAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALN 201
           +AV+H H  ++  KA   L +   +D N  +SYY  G IY   G  E+A++ L K +   
Sbjct: 32  KAVIHFHTGNN-IKAKELLKKYINLDKNNPESYYYLGSIYLEEGNPEKAVKYLKKAV--- 87

Query: 202 PNFHVARAQRHF--VVHKMIVPGDRERVEQSLKEFRNFVDTHSNVVEACTLFAQVLVDQE 259
                 +   +F  + +   + GD E+   ++K +   ++   ++  A            
Sbjct: 88  ---EKGKKAEYFNDLGYAYFLKGDPEK---AIKCYTKAIEIKPDLAVAYYNRGLAFKKMG 141

Query: 260 DFDGAEEYFNRSIRVDPENASLYVHRAMLMLQARGNVDEAIKLIEKAISIDKSCMFAYET 319
           D+D A + +NR+I ++PE+   Y +   ++ + +G++ +A+   +KAI I+      Y  
Sbjct: 142 DYDEAVKNYNRAIALNPEDPDYYYNLG-IVYRIKGDLQKAVNCYKKAIEINPENENYYNN 200

Query: 320 LGTIEVQRGRLEEAVKCFNKAL 341
           LG +       ++AV+C+ KA+
Sbjct: 201 LGNVYYDMKDYKKAVECYKKAV 222



 Score = 41.6 bits (96), Expect = 0.96,   Method: Compositional matrix adjust.
 Identities = 27/85 (31%), Positives = 44/85 (51%), Gaps = 7/85 (8%)

Query: 437 GDPTKTIE------ESEKYGNLENESGQKH-AASDFTKAFADLDEAEKVDPNVADSYYQR 489
           G+P K ++      E  K     N+ G  +    D  KA     +A ++ P++A +YY R
Sbjct: 74  GNPEKAVKYLKKAVEKGKKAEYFNDLGYAYFLKGDPEKAIKCYTKAIEIKPDLAVAYYNR 133

Query: 490 GQIYCLFGQYEEALRNLDKTIALNP 514
           G  +   G Y+EA++N ++ IALNP
Sbjct: 134 GLAFKKMGDYDEAVKNYNRAIALNP 158


>gi|312112988|ref|YP_004010584.1| hypothetical protein Rvan_0195 [Rhodomicrobium vannielii ATCC
           17100]
 gi|311218117|gb|ADP69485.1| Tetratricopeptide TPR_1 repeat-containing protein [Rhodomicrobium
           vannielii ATCC 17100]
          Length = 557

 Score = 68.6 bits (166), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 51/198 (25%), Positives = 95/198 (47%), Gaps = 14/198 (7%)

Query: 149 AASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVAR 208
           AA+DFTKA +       ++P+ A +Y  RG ++    + ++A R+ D+ +AL+P+F  A 
Sbjct: 84  AAADFTKAVS-------LNPDYALAYNNRGNVFLEMNRPDDAFRDFDRAVALSPDFGAAY 136

Query: 209 AQRHFVVHKMIVPGDRERVEQSLKEFRNFVDTHSNVVEACTLFAQVLVDQEDFDGAEEYF 268
           A R     K+  P   +  E+  ++    +   S  +  C    ++   +        Y 
Sbjct: 137 ANRANASQKLNHP---DVAEKDFRKAIELMPASSIPLNGC---GRIAAGEGRLYTGLRYL 190

Query: 269 NRSIRVDPENASLYVHRAMLMLQARGNVDEAIKLIEKAISIDKSCMFAYETLGTIEVQRG 328
           NR+I ++ + A  Y +RA +    + N DEA + ++K I++    +  Y   G    +  
Sbjct: 191 NRAITLNAQFAPAYHNRAAIYAALKRN-DEAAQDLDKVIALAPDNVALYVARGQAHAKEK 249

Query: 329 RLEEAVKCFNKALPLARD 346
           R + A + F+KA+ LA D
Sbjct: 250 RWQPAFRDFSKAVELASD 267



 Score = 44.3 bits (103), Expect = 0.17,   Method: Compositional matrix adjust.
 Identities = 22/63 (34%), Positives = 38/63 (60%), Gaps = 7/63 (11%)

Query: 461 AASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVAR 520
           AA+DFTKA +       ++P+ A +Y  RG ++    + ++A R+ D+ +AL+P+F  A 
Sbjct: 84  AAADFTKAVS-------LNPDYALAYNNRGNVFLEMNRPDDAFRDFDRAVALSPDFGAAY 136

Query: 521 AQR 523
           A R
Sbjct: 137 ANR 139



 Score = 43.5 bits (101), Expect = 0.31,   Method: Compositional matrix adjust.
 Identities = 75/346 (21%), Positives = 138/346 (39%), Gaps = 46/346 (13%)

Query: 176 QRGQIYCLFGQYEEALRNLDKTI---ALNPNFHVARAQRHFVVHKMIVPGDRERVEQSLK 232
           Q G    L G+Y+ A+   D+ +    L P    AR Q   +  + +     ++++ +  
Sbjct: 32  QEGSSALLRGRYDLAVSAYDEALREAGLPP----AR-QATILSDRGVAKWRMKQLDDAAA 86

Query: 233 EFRNFVDTHSNVVEACTLFAQVLVDQEDFDGAEEYFNRSIRVDPENASLYVHRAMLMLQA 292
           +F   V  + +   A      V ++    D A   F+R++ + P+  + Y +RA    Q 
Sbjct: 87  DFTKAVSLNPDYALAYNNRGNVFLEMNRPDDAFRDFDRAVALSPDFGAAYANRANAS-QK 145

Query: 293 RGNVDEAIKLIEKAISIDKSCMFAYETLGTIEVQRGRLEEAVKCFNKALPLARDEAELSH 352
             + D A K   KAI +  +        G I    GRL   ++  N+A+ L    A+ + 
Sbjct: 146 LNHPDVAEKDFRKAIELMPASSIPLNGCGRIAAGEGRLYTGLRYLNRAITL---NAQFAP 202

Query: 353 IYSLRDAAIAQMKVCERY--NIKKKVSPRSQNITKNEKLAIKQLRENNDIIIRPADKGGK 410
            Y  R A  A +K  +    ++ K ++    N+           +E      +PA +   
Sbjct: 203 AYHNRAAIYAALKRNDEAAQDLDKVIALAPDNVALYVARGQAHAKEKR---WQPAFR--- 256

Query: 411 TVVMDKADYTQKMTSILNSNDYEIIPGDPTKTIEESEKYGNLENESGQKHAASDFTKAFA 470
                  D+++ +   L S++   + G  ++ +E   K  +L               A  
Sbjct: 257 -------DFSKAVE--LASDNVPALIGRASQNLER--KRADL---------------ALD 290

Query: 471 DLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNF 516
           DL+ A  +D N A++Y+ RGQ     G  E A  +L K + L P +
Sbjct: 291 DLNHAISLDANAAEAYFWRGQAKYGTGDVEGADADLSKALELAPAY 336



 Score = 38.9 bits (89), Expect = 7.1,   Method: Compositional matrix adjust.
 Identities = 21/56 (37%), Positives = 32/56 (57%), Gaps = 3/56 (5%)

Query: 472 LDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPN---FHVARAQRH 524
           L+ A  ++   A +Y+ R  IY    + +EA ++LDK IAL P+    +VAR Q H
Sbjct: 190 LNRAITLNAQFAPAYHNRAAIYAALKRNDEAAQDLDKVIALAPDNVALYVARGQAH 245


>gi|435851441|ref|YP_007313027.1| putative endonuclease related to Holliday junction resolvase
           [Methanomethylovorans hollandica DSM 15978]
 gi|433662071|gb|AGB49497.1| putative endonuclease related to Holliday junction resolvase
           [Methanomethylovorans hollandica DSM 15978]
          Length = 913

 Score = 68.6 bits (166), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 79/370 (21%), Positives = 159/370 (42%), Gaps = 50/370 (13%)

Query: 161 DEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQRHFVVHKMIV 220
           ++A K+D   A ++  +G      G+YEEA++  DK I +NP    A   + + +  +  
Sbjct: 564 NKAIKIDQKSASAWNSKGFALTDAGRYEEAIQAYDKAIEINPRSDSAWDSKGWALRSL-- 621

Query: 221 PGDRERVEQSLKEFRNFVDTHSNVVEACTLFAQVLVDQEDFDGAEEYFNRSIRVDPENAS 280
                R E++++E+                                  +++I ++P +AS
Sbjct: 622 ----GRDEEAIQEY----------------------------------DKAIEINPRSAS 643

Query: 281 LYVHRAMLMLQARGNVDEAIKLIEKAISIDKSCMFAYETLGTIEVQRGRLEEAVKCFNKA 340
           ++  +  L L + G  +EAI+  +K I ID     A++  G      GR EEA++ ++KA
Sbjct: 644 IWNSKG-LALSSLGRDEEAIQAFDKVIEIDSKYPHAWDNKGLALSTLGRDEEAIQAYDKA 702

Query: 341 LPLARDEAELSHIYSLRDAAIAQM----KVCERYNIKKKVSPRSQNITKNEKLAIKQLRE 396
           + +   + +    +S +  A++ +    +  + Y+   +++PRS +I   + LA+  L  
Sbjct: 703 IEI---DPKFEGPWSSKGFALSSLGRYEEAIQAYDKAIEINPRSASIWSGKGLALSILGR 759

Query: 397 NNDIIIRPADKGGKTVVMDKADYTQKMTSILNSNDYEIIPGDPTKTIEESEKYG-NLENE 455
             +  I+  DK  +      + +  K  ++ +   YE       K IE + K   +  N 
Sbjct: 760 YEE-AIQAYDKVIEINPRSDSAWDSKGLALSSLGRYEEAIQAFDKAIEVNPKSDISWANT 818

Query: 456 SGQKHAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPN 515
                +   + +A    D+A ++D     ++ + G      G+YEEA++  D  I +NP 
Sbjct: 819 GYVLSSLGKYEEAMCAFDKAIEIDSMSEIAWVRMGFALTDAGRYEEAIQAFDVVIEINPK 878

Query: 516 FHVARAQRHF 525
             V    + F
Sbjct: 879 SSVIWHTKGF 888



 Score = 61.2 bits (147), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 53/220 (24%), Positives = 99/220 (45%), Gaps = 13/220 (5%)

Query: 130 VDPKIKVNAHIKRAVVHLHAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEE 189
           +DPK +     K     L +   + +A    D+A +++P  A  +  +G    + G+YEE
Sbjct: 705 IDPKFEGPWSSKG--FALSSLGRYEEAIQAYDKAIEINPRSASIWSGKGLALSILGRYEE 762

Query: 190 ALRNLDKTIALNPNFHVARAQRHFVVHKMIVPGDRERVEQSLKEFRNFVDTH--SNVVEA 247
           A++  DK I +NP    A   +   +  +       R E++++ F   ++ +  S++  A
Sbjct: 763 AIQAYDKVIEINPRSDSAWDSKGLALSSL------GRYEEAIQAFDKAIEVNPKSDISWA 816

Query: 248 CTLFAQVLVDQEDFDGAEEYFNRSIRVDPENASLYVHRAMLMLQARGNVDEAIKLIEKAI 307
            T    VL     ++ A   F+++I +D  +   +V     +  A G  +EAI+  +  I
Sbjct: 817 NT--GYVLSSLGKYEEAMCAFDKAIEIDSMSEIAWVRMGFALTDA-GRYEEAIQAFDVVI 873

Query: 308 SIDKSCMFAYETLGTIEVQRGRLEEAVKCFNKALPLARDE 347
            I+      + T G      GR EEA++ F++A  L   E
Sbjct: 874 EINPKSSVIWHTKGFALRSLGREEEAIQAFDRAKELGYTE 913



 Score = 58.5 bits (140), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 59/265 (22%), Positives = 129/265 (48%), Gaps = 8/265 (3%)

Query: 269 NRSIRVDPENASLYVHRAMLMLQARGNVDEAIKLIEKAISIDKSCMFAYETLGTIEVQRG 328
           N++I++D ++AS +  +   +  A G  +EAI+  +KAI I+     A+++ G      G
Sbjct: 564 NKAIKIDQKSASAWNSKGFALTDA-GRYEEAIQAYDKAIEINPRSDSAWDSKGWALRSLG 622

Query: 329 RLEEAVKCFNKALPLARDEAELSHIYSLRDAAIAQ-MKVCERYNIKKKVSPRSQNITKNE 387
           R EEA++ ++KA+ +    A + +   L  +++ +  +  + ++   ++  +  +   N+
Sbjct: 623 RDEEAIQEYDKAIEINPRSASIWNSKGLALSSLGRDEEAIQAFDKVIEIDSKYPHAWDNK 682

Query: 388 KLAIKQLRENNDIIIRPADKGGKTVVMDKADYTQKMTSILNSNDYEIIPGDPTKTIEESE 447
            LA+  L  + + I +  DK  +     +  ++ K  ++ +   YE       K IE + 
Sbjct: 683 GLALSTLGRDEEAI-QAYDKAIEIDPKFEGPWSSKGFALSSLGRYEEAIQAYDKAIEINP 741

Query: 448 KYGNLENESGQKHAAS---DFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALR 504
           +  ++   SG+  A S    + +A    D+  +++P    ++  +G      G+YEEA++
Sbjct: 742 RSASIW--SGKGLALSILGRYEEAIQAYDKVIEINPRSDSAWDSKGLALSSLGRYEEAIQ 799

Query: 505 NLDKTIALNPNFHVARAQRHFVWTS 529
             DK I +NP   ++ A   +V +S
Sbjct: 800 AFDKAIEVNPKSDISWANTGYVLSS 824



 Score = 49.7 bits (117), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 51/257 (19%), Positives = 106/257 (41%), Gaps = 41/257 (15%)

Query: 119 EDLTQLVEDTSVDPKIKVNAHIKRAVVHLHAASDFTKAFADLDEAEKVDPNVADSYYQRG 178
           ++L  L+ + ++    K  +        L  A  + +A    D+A +++P    ++  +G
Sbjct: 556 DELNYLINNKAIKIDQKSASAWNSKGFALTDAGRYEEAIQAYDKAIEINPRSDSAWDSKG 615

Query: 179 QIYCLFGQYEEALRNLDKTIALNPNFHVARAQRHFVVHKMIVPGDRERVEQSLKEFRNFV 238
                 G+ EEA++  DK I +NP        +   +  +       R E++++ F   +
Sbjct: 616 WALRSLGRDEEAIQEYDKAIEINPRSASIWNSKGLALSSL------GRDEEAIQAFDKVI 669

Query: 239 DTHSNVV-----------------EACTLFAQVLVDQEDFDG-----------------A 264
           +  S                    EA   + + +     F+G                 A
Sbjct: 670 EIDSKYPHAWDNKGLALSTLGRDEEAIQAYDKAIEIDPKFEGPWSSKGFALSSLGRYEEA 729

Query: 265 EEYFNRSIRVDPENASLYVHRAMLMLQARGNVDEAIKLIEKAISIDKSCMFAYETLGTIE 324
            + ++++I ++P +AS++  +  L L   G  +EAI+  +K I I+     A+++ G   
Sbjct: 730 IQAYDKAIEINPRSASIWSGKG-LALSILGRYEEAIQAYDKVIEINPRSDSAWDSKGLAL 788

Query: 325 VQRGRLEEAVKCFNKAL 341
              GR EEA++ F+KA+
Sbjct: 789 SSLGRYEEAIQAFDKAI 805


>gi|386876076|ref|ZP_10118214.1| tetratricopeptide repeat protein [Candidatus Nitrosopumilus salaria
           BD31]
 gi|386806122|gb|EIJ65603.1| tetratricopeptide repeat protein [Candidatus Nitrosopumilus salaria
           BD31]
          Length = 297

 Score = 68.6 bits (166), Expect = 9e-09,   Method: Compositional matrix adjust.
 Identities = 61/275 (22%), Positives = 126/275 (45%), Gaps = 35/275 (12%)

Query: 145 VHLHAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNF 204
           V L     + KA    D+A  +DPN  + +Y +G      G+ +EAL   ++ I +NPN 
Sbjct: 12  VALVNQGKYHKALKVYDKALNIDPNNWNVWYNKGVALDELGRNDEALECFNQAIQINPND 71

Query: 205 HVARAQRHFVVHKMIVPGDRERVEQSLKEFRNFVDTHSNVVEACTLFAQVLVDQEDFDGA 264
             A + +   + K+       R ++++  F   +    N   A       L +    D A
Sbjct: 72  AWAWSNKGITLGKL------GRNDEAVMAFDQEIKIDPNDA-AWYNRGMALDNLGRNDEA 124

Query: 265 EEYFNRSIRVDPENASLYVHRAMLMLQARGNV---------------------DEAIKLI 303
            E FN++I+++P N S  V + + + +   NV                     +EA++  
Sbjct: 125 LECFNQAIQINPNNLSACVKKDITLDKIGKNVEREMVRMWTNKGVALEKIDKLNEALECY 184

Query: 304 EKAISIDKSCMFAYETLGTIEVQRGRLEEAVKCFNKALPLARDEAELSHIYSLRDAAIAQ 363
           ++A+ I ++ M+ ++  G I  +  R+ EA++CFN+A+ +  ++A    +++ +  A+ +
Sbjct: 185 DEALKISRNYMWPWDNKGIILNKLNRINEALECFNQAIQINPNDA---TVWNDKGVALGK 241

Query: 364 M----KVCERYNIKKKVSPRSQNITKNEKLAIKQL 394
           +    +    ++   K+ P S    KN+ +A++ L
Sbjct: 242 LNRNDEAVMAFDQAIKLDPNSAVAWKNKGIALENL 276



 Score = 51.2 bits (121), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 58/280 (20%), Positives = 129/280 (46%), Gaps = 20/280 (7%)

Query: 243 NVVEACTLFAQVLVDQEDFDGAEEYFNRSIRVDPENASLYVHRAMLMLQARGNVDEAIKL 302
           N  E C      LV+Q  +  A + +++++ +DP N +++ ++  + L   G  DEA++ 
Sbjct: 3   NATELCEK-GVALVNQGKYHKALKVYDKALNIDPNNWNVWYNKG-VALDELGRNDEALEC 60

Query: 303 IEKAISIDKSCMFAYETLGTIEVQRGRLEEAVKCFNKALPLARDEAELSHIYSLRDAAIA 362
             +AI I+ +  +A+   G    + GR +EAV  F++ + +  ++A   +     D    
Sbjct: 61  FNQAIQINPNDAWAWSNKGITLGKLGRNDEAVMAFDQEIKIDPNDAAWYNRGMALDNLGR 120

Query: 363 QMKVCERYNIKKKVSPRSQNITKNEKLAIKQLREN--NDIIIRPADKGGKTVVMDKADYT 420
             +  E +N   +++P + +    + + + ++ +N   +++    +KG   V ++K D  
Sbjct: 121 NDEALECFNQAIQINPNNLSACVKKDITLDKIGKNVEREMVRMWTNKG---VALEKID-- 175

Query: 421 QKMTSILNSNDYEIIPGDPTKTIEESEKY-GNLENESGQKHAASDFTKAFADLDEAEKVD 479
            K+   L   D         + ++ S  Y    +N+    +  +   +A    ++A +++
Sbjct: 176 -KLNEALECYD---------EALKISRNYMWPWDNKGIILNKLNRINEALECFNQAIQIN 225

Query: 480 PNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVA 519
           PN A  +  +G       + +EA+   D+ I L+PN  VA
Sbjct: 226 PNDATVWNDKGVALGKLNRNDEAVMAFDQAIKLDPNSAVA 265



 Score = 49.3 bits (116), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 54/246 (21%), Positives = 113/246 (45%), Gaps = 41/246 (16%)

Query: 185 GQYEEALRNLDKTIALNPNFHVARAQRHFVVHKMIVPGDRERVEQSLKEFRNFVDTHSNV 244
           G+Y +AL+  DK + ++PN        +   +K +   +  R +++L+ F   +  + N 
Sbjct: 18  GKYHKALKVYDKALNIDPN------NWNVWYNKGVALDELGRNDEALECFNQAIQINPND 71

Query: 245 VEACTLFAQVLVDQEDFDGAEEYFNRSIRVDPENASLYVHRAMLMLQARGNVDEAIKLIE 304
             A +     L      D A   F++ I++DP +A+ Y +R M  L   G  DEA++   
Sbjct: 72  AWAWSNKGITLGKLGRNDEAVMAFDQEIKIDPNDAAWY-NRGM-ALDNLGRNDEALECFN 129

Query: 305 KAISID----KSCMFAYETLGTI--EVQR----------------GRLEEAVKCFNKALP 342
           +AI I+     +C+    TL  I   V+R                 +L EA++C+++AL 
Sbjct: 130 QAIQINPNNLSACVKKDITLDKIGKNVEREMVRMWTNKGVALEKIDKLNEALECYDEALK 189

Query: 343 LARDEAELSHIYSLRDAAIAQMKV------CERYNIKKKVSPRSQNITKNEKLAIKQLRE 396
           ++R     ++++   +  I   K+       E +N   +++P    +  ++ +A+ +L  
Sbjct: 190 ISR-----NYMWPWDNKGIILNKLNRINEALECFNQAIQINPNDATVWNDKGVALGKLNR 244

Query: 397 NNDIII 402
           N++ ++
Sbjct: 245 NDEAVM 250


>gi|344299677|gb|EGW30030.1| hypothetical protein SPAPADRAFT_63650 [Spathaspora passalidarum
           NRRL Y-27907]
          Length = 400

 Score = 68.6 bits (166), Expect = 9e-09,   Method: Compositional matrix adjust.
 Identities = 59/247 (23%), Positives = 113/247 (45%), Gaps = 14/247 (5%)

Query: 127 DTSVDPKIKVNAHIKRAVVHLHAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQ 186
           + +++ K +  ++I RA+++   +S + +A  D  +AE++DP   D +Y  GQ++ L G 
Sbjct: 141 EKAINLKPRPRSYIFRALINADKSS-YQEALEDFKKAEEMDPECPDIFYHLGQLFYLTGD 199

Query: 187 YEEALRNLDKTIALNPNFHVARAQRHFVVHKMIVPGDRERVEQSLKEFRNFVDTHSNVVE 246
             +A  N +K   L+P    A  Q   + +K    G  E   +   E R    T   V  
Sbjct: 200 LTQAETNFNKAKELHPENVYAYIQLACIAYKN---GSGESANEKFTEARLKFPTSPEV-- 254

Query: 247 ACTLFAQVLVDQEDFDGAEEYFNRSIRVDPENASLYV-------HRAMLMLQARGNVDEA 299
               + ++L D+ D  GA   F  + R+  +     V       H  ++  ++   +DEA
Sbjct: 255 -PNYYGEILADKGDIQGAVRQFEIAARLQEKLERFSVGALPLINHATVISRESLERIDEA 313

Query: 300 IKLIEKAISIDKSCMFAYETLGTIEVQRGRLEEAVKCFNKALPLARDEAELSHIYSLRDA 359
            +L+ +A  +D     A  +L  I++Q+  +++A+  F ++  LAR   E     S  +A
Sbjct: 314 QELLVRACELDPRSELARISLAQIKLQKDEVDDAIVLFEESSDLARSFEEKVQATSFAEA 373

Query: 360 AIAQMKV 366
              Q ++
Sbjct: 374 TKMQKRI 380



 Score = 39.7 bits (91), Expect = 4.6,   Method: Compositional matrix adjust.
 Identities = 18/52 (34%), Positives = 29/52 (55%)

Query: 463 SDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNP 514
           S + +A  D  +AE++DP   D +Y  GQ++ L G   +A  N +K   L+P
Sbjct: 164 SSYQEALEDFKKAEEMDPECPDIFYHLGQLFYLTGDLTQAETNFNKAKELHP 215


>gi|113476527|ref|YP_722588.1| hypothetical protein Tery_2953 [Trichodesmium erythraeum IMS101]
 gi|110167575|gb|ABG52115.1| TPR repeat [Trichodesmium erythraeum IMS101]
          Length = 711

 Score = 68.6 bits (166), Expect = 9e-09,   Method: Compositional matrix adjust.
 Identities = 82/390 (21%), Positives = 163/390 (41%), Gaps = 52/390 (13%)

Query: 134 IKVNAHIKRA-------VVHLHAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQ 186
           I +N+++  A        V LH  SD   A A  D A  +  +  + ++ RG ++    +
Sbjct: 306 ISLNSYLSEAWFKSGNVFVKLHRYSD---ALAAYDHAIAIHSDRFEYWFNRGNVFVKLER 362

Query: 187 YEEALRNLDKTIALNPNFHVARAQRHFVVHKMIVPGDRERVEQSLKEFRNFVDTHSNVVE 246
           Y EAL + DK ++LN N HV        +++ I+    +R  +++  ++  +      V+
Sbjct: 363 YSEALASYDKALSLNQN-HV-----EIWLNRGILFRKLQRYNEAVVSYQKAILIQPKNVD 416

Query: 247 ACTLFAQVLVDQEDFDGAEEYFNRSIRVDPENASLYVHRAMLMLQARGNVDEAIKLIEKA 306
                  +L   E ++ A   F++++++ P    ++ +R  L+ + +   +EAI   +KA
Sbjct: 417 ILHNLGALLGKLERYEEAITTFDQALKIQPNKFEIWYNRGNLLGRIQS-FNEAINSYDKA 475

Query: 307 ISIDKSCMFAYETLGTIEVQRGRLEEAVKCFNKALPLARDEAELSHIYSLRDAAIAQMKV 366
           + I       +   G I  Q  + +EAV C+++A+ L  D+ E+ H    R  A+  +  
Sbjct: 476 LKIKPDRYEIWYNKGAILWQIEKYQEAVNCYDQAINLMPDDYEVWHN---RGVALGAL-- 530

Query: 367 CERYNIKKKVSPRSQNITKNEKLAIKQLRENNDIIIRPADKGGKTVVMDKADYTQKMTSI 426
            E+Y  +K V+                            DK  K        +  K  ++
Sbjct: 531 -EKY--QKAVNSY--------------------------DKAIKIYPQCYQAFIGKAETL 561

Query: 427 LNSNDYEIIPGDPTKTIE-ESEKYGNLENESGQKHAASDFTKAFADLDEAEKVDPNVADS 485
           L    YE         I  + E+Y     +       + + +A    D+   ++ N  ++
Sbjct: 562 LKLEQYEEALSSCNHAIAIKKERYEGWLCQGRVLEKLTSYEEALMAYDQTIAINDNSYEA 621

Query: 486 YYQRGQIYCLFGQYEEALRNLDKTIALNPN 515
           + ++G +     +Y+EAL   D+ IA+ PN
Sbjct: 622 WARKGMVLEKIKRYQEALMCYDRAIAIKPN 651



 Score = 67.0 bits (162), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 86/384 (22%), Positives = 165/384 (42%), Gaps = 40/384 (10%)

Query: 160 LDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQRHFVVHKMI 219
           L  +EK    +AD Y++ G+     GQY +AL N +K I+LN     A  +   V  K+ 
Sbjct: 268 LKSSEKQPTMIADDYFKLGEKQFYDGQYNQALANFEKAISLNSYLSEAWFKSGNVFVKL- 326

Query: 220 VPGDRERVEQSLKEFRNFVDTHSNVVEACTLFAQVLVDQEDFDGAEEYFNRSIRVDPENA 279
                 R   +L  + + +  HS+  E       V V  E +  A   +++++ ++  + 
Sbjct: 327 -----HRYSDALAAYDHAIAIHSDRFEYWFNRGNVFVKLERYSEALASYDKALSLNQNHV 381

Query: 280 SLYVHRAMLMLQARGNVDEAIKLIEKAISIDKSCMFAYETLGTIEVQRGRLEEAVKCFNK 339
            ++++R +L  + +   +EA+   +KAI I    +     LG +  +  R EEA+  F++
Sbjct: 382 EIWLNRGILFRKLQ-RYNEAVVSYQKAILIQPKNVDILHNLGALLGKLERYEEAITTFDQ 440

Query: 340 ALPLARDEAELSHIYSLRDAAIAQMK----VCERYNIKKKVSPRSQNITKNEKLAIKQLR 395
           AL +  ++ E   I+  R   + +++        Y+   K+ P    I  N+   + Q+ 
Sbjct: 441 ALKIQPNKFE---IWYNRGNLLGRIQSFNEAINSYDKALKIKPDRYEIWYNKGAILWQIE 497

Query: 396 ENNDII--------IRPAD---KGGKTVVMDKADYTQKMTSILNSND--YEIIPGDPTKT 442
           +  + +        + P D      + V +   +  QK    +NS D   +I P      
Sbjct: 498 KYQEAVNCYDQAINLMPDDYEVWHNRGVALGALEKYQKA---VNSYDKAIKIYPQCYQAF 554

Query: 443 IEESEKYGNLENESGQKHAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEA 502
           I ++E    LE           + +A +  + A  +     + +  +G++      YEEA
Sbjct: 555 IGKAETLLKLE----------QYEEALSSCNHAIAIKKERYEGWLCQGRVLEKLTSYEEA 604

Query: 503 LRNLDKTIALNPNFHVARAQRHFV 526
           L   D+TIA+N N + A A++  V
Sbjct: 605 LMAYDQTIAINDNSYEAWARKGMV 628



 Score = 48.5 bits (114), Expect = 0.008,   Method: Compositional matrix adjust.
 Identities = 40/225 (17%), Positives = 100/225 (44%), Gaps = 29/225 (12%)

Query: 153 FTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPN--------- 203
           + +A    D+A K+ PN  + +Y RG +      + EA+ + DK + + P+         
Sbjct: 431 YEEAITTFDQALKIQPNKFEIWYNRGNLLGRIQSFNEAINSYDKALKIKPDRYEIWYNKG 490

Query: 204 ---FHVARAQR---------------HFVVH-KMIVPGDRERVEQSLKEFRNFVDTHSNV 244
              + + + Q                + V H + +  G  E+ ++++  +   +  +   
Sbjct: 491 AILWQIEKYQEAVNCYDQAINLMPDDYEVWHNRGVALGALEKYQKAVNSYDKAIKIYPQC 550

Query: 245 VEACTLFAQVLVDQEDFDGAEEYFNRSIRVDPENASLYVHRAMLMLQARGNVDEAIKLIE 304
            +A    A+ L+  E ++ A    N +I +  E    ++ +   +L+   + +EA+   +
Sbjct: 551 YQAFIGKAETLLKLEQYEEALSSCNHAIAIKKERYEGWLCQGR-VLEKLTSYEEALMAYD 609

Query: 305 KAISIDKSCMFAYETLGTIEVQRGRLEEAVKCFNKALPLARDEAE 349
           + I+I+ +   A+   G +  +  R +EA+ C+++A+ +  +++E
Sbjct: 610 QTIAINDNSYEAWARKGMVLEKIKRYQEALMCYDRAIAIKPNDSE 654


>gi|354548559|emb|CCE45296.1| hypothetical protein CPAR2_703090 [Candida parapsilosis]
          Length = 601

 Score = 68.6 bits (166), Expect = 9e-09,   Method: Compositional matrix adjust.
 Identities = 78/358 (21%), Positives = 155/358 (43%), Gaps = 23/358 (6%)

Query: 16  KRSFFKPSKQFIKTYLKSFPNDPILQPDGLSNGVELTNGDTNESHELDLLSKAKRAFEHE 75
           ++++  PS   I ++  +F ++P L  DG     +   G       + +    K  ++  
Sbjct: 240 EKTYQLPSAATIGSFFGAFADEPHL--DGADENSQ-GGGKFLYDAIVKIKGNTKEGYDEA 296

Query: 76  DYLTAIRHCTEEIESTSSNHTKALARLLRATVYIFTSQSTKAIEDLTQLVEDTSVDPKIK 135
           D  T I      +E   S        L  A+ + F         D+    +  S+ P+ +
Sbjct: 297 D--TLINQAVSALEGDESKKELYAVALEYASAFHFLKNDPSTAADVIN--KSISIQPRAR 352

Query: 136 VNAHIKRAVVHLHAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLD 195
             +++ RA+++   +S + +A  D   A+ +DPN  D +Y  GQ++ L G    A  N  
Sbjct: 353 --SYVFRALINADKSS-YDEALNDFKLAQNLDPNSPDIFYHLGQLHYLTGDLTNAEINFQ 409

Query: 196 KTIALNPNFHVARAQRHFVVHKMIVPGDRERVEQSLKEFRNFVDTHSNVVEACTLFAQVL 255
           K  +L+P+   A  Q   + +K    G R+  ++   E +    T     E    + ++L
Sbjct: 410 KAKSLHPDNVYAYIQLACITYKN---GHRDLADEKFTEAKLKFPTSP---EIPNYYGEIL 463

Query: 256 VDQEDFDGAEEYFNRSIRVDPE------NASLYVHRAMLM-LQARGNVDEAIKLIEKAIS 308
            D+ D +GA   F+ S R+  +       A   +++A ++  ++   + EA  L+ KA +
Sbjct: 464 ADKGDVEGALRQFDISARLQEKLDRFSVGALPLINKATVISRESLERIGEAETLLTKACA 523

Query: 309 IDKSCMFAYETLGTIEVQRGRLEEAVKCFNKALPLARDEAELSHIYSLRDAAIAQMKV 366
           +D     A  +L  I++Q+  +++A+  F ++  LAR   E     S  +A   Q ++
Sbjct: 524 LDPKSELARISLAQIKLQKDEVDDAIVLFEESCDLARSIEEKVQAISFAEATKMQKRI 581


>gi|225620848|ref|YP_002722106.1| TPR domain-containing protein [Brachyspira hyodysenteriae WA1]
 gi|225215668|gb|ACN84402.1| TPR domain-containing protein [Brachyspira hyodysenteriae WA1]
          Length = 798

 Score = 68.6 bits (166), Expect = 9e-09,   Method: Compositional matrix adjust.
 Identities = 54/226 (23%), Positives = 105/226 (46%), Gaps = 12/226 (5%)

Query: 116 KAIEDLTQLVEDTSVDPKIKVNAHIKRAVVHLHAASDFTKAFADLDEAEKVDPNVADSYY 175
           +A+ED  + +E    D  +  N  + +  +HL     + +A  D D A  +     + YY
Sbjct: 372 EALEDYNKAIELEQNDAYLYNNRALLKGRMHL-----YKEAIEDFDRAISLYDRDCEFYY 426

Query: 176 QRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQRHFVVHKMIVPGDRERVEQSLKEFR 235
            RG       + +EAL+ ++K I L+PN+  A  +R  + ++          + ++K+F+
Sbjct: 427 YRGLTNSYLNELDEALQYINKAIELDPNYINAYNERGLIHYR------NSNYDLAIKDFK 480

Query: 236 NFVDTHSNVVEACTLFAQVLVDQEDFDGAEEYFNRSIRVDPENASLYVHRAMLMLQARGN 295
             ++  +  V A    A      E+++ A +Y+ R I +DP     Y +RA+  ++    
Sbjct: 481 KVIELDNESVYANYHLALSYDALEEYETALKYYARVIELDPNTPDSYYNRALAEIEMEL- 539

Query: 296 VDEAIKLIEKAISIDKSCMFAYETLGTIEVQRGRLEEAVKCFNKAL 341
            +EAI+   K I ID + + AY  +G         ++A+ C+ K +
Sbjct: 540 YNEAIEDFYKVIDIDNTIIDAYFNIGICYDSLKEHQKAIDCYTKVI 585



 Score = 60.5 bits (145), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 103/489 (21%), Positives = 203/489 (41%), Gaps = 59/489 (12%)

Query: 64  LLSKAKRAFEHEDYLTAIRHCTEEIESTSSNHTKALARLLRATVYIFTSQSTKAIEDLTQ 123
           L      AF  +DY  AI++  E I+     + + +     +   I++       E+  +
Sbjct: 10  LFDLGNDAFISKDYEKAIKYLDEVIDI----YNRDIIAYSDSEFIIYSDSYDNEDEEEGK 65

Query: 124 LVEDTSVDP--KIKVNAHIKRAVVHLHAASDFTKAFADLDEAEKVDPNVADSYYQRGQIY 181
            + D  ++    I V+ +  R + + +   ++ +A  D D+  ++ P  +++YY RG   
Sbjct: 66  NINDEDINNTHNILVDTYYNRGLSYFNL-KNYEEAIKDFDKVIELSPEKSNAYYNRGHSK 124

Query: 182 CLFGQYEEALRNLDKTIALNPN------------FHVARAQRHFVVHKMIVPGDRERVEQ 229
              G+YEE +++  K +  N +            F++ R Q       + +  D E ++ 
Sbjct: 125 SYLGKYEEGIKDFKKVLEFNEDDAEAIYYIGLGYFYLGRYQEAIKNFDIALLLDDE-IDD 183

Query: 230 SLKEFRNFVDTHSNVVEACTLFAQVLVDQEDFDGAEEYFNRSIRVDPENASLYVHRAMLM 289
           +      +   HS       ++ + L D          FN+ + +  +++  Y  +A+  
Sbjct: 184 AY-----YYRGHSK--RYLNMYEEALSD----------FNKIVELRDDDSDSYYSKALTE 226

Query: 290 LQARGNVDEAIKLIEKAISIDKSCMFAYETLGTIEVQRGRLEEAVKCFNKALPLARDEAE 349
               G  ++AIK  +KAI +D +   AY   G  +      ++A+  + KAL  A DE  
Sbjct: 227 F-FLGLYEDAIKDFDKAIELDGNYSNAYYFRGLTKNSLELYKDAMDDYKKALEYA-DEDN 284

Query: 350 LSHIYSLRDAAIAQMKVCERYNIKKKVSPRSQNITKNEKLAI----KQLRENNDIIIRPA 405
           +  IY+  D  + + K+    N K+ ++  ++ I  N+ +      + L E +  +   A
Sbjct: 285 IISIYN--DMGLLEYKLG---NYKESINYYTKIIEINDDIYYSYYNRALAEESLQLYEDA 339

Query: 406 DKG-GKTVVMDKADYTQKMTSILNSND---YEIIPGDPTKTIE----ESEKYGNLENESG 457
            K   K + ++  D        L  N+   Y+    D  K IE    ++  Y N     G
Sbjct: 340 LKDYNKAIELNPEDTYSYNNRGLIKNEMQMYDEALEDYNKAIELEQNDAYLYNNRALLKG 399

Query: 458 QKHAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFH 517
           + H    + +A  D D A  +     + YY RG       + +EAL+ ++K I L+PN+ 
Sbjct: 400 RMHL---YKEAIEDFDRAISLYDRDCEFYYYRGLTNSYLNELDEALQYINKAIELDPNYI 456

Query: 518 VARAQRHFV 526
            A  +R  +
Sbjct: 457 NAYNERGLI 465



 Score = 51.2 bits (121), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 46/206 (22%), Positives = 93/206 (45%), Gaps = 7/206 (3%)

Query: 165 KVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQRHFVVHKMIVPGDR 224
           +++ ++  SYY R         YE+AL++ +K I LNP    +   R  + ++M      
Sbjct: 314 EINDDIYYSYYNRALAEESLQLYEDALKDYNKAIELNPEDTYSYNNRGLIKNEM------ 367

Query: 225 ERVEQSLKEFRNFVDTHSNVVEACTLFAQVLVDQEDFDGAEEYFNRSIRVDPENASLYVH 284
           +  +++L+++   ++   N        A +      +  A E F+R+I +   +   Y +
Sbjct: 368 QMYDEALEDYNKAIELEQNDAYLYNNRALLKGRMHLYKEAIEDFDRAISLYDRDCEFYYY 427

Query: 285 RAMLMLQARGNVDEAIKLIEKAISIDKSCMFAYETLGTIEVQRGRLEEAVKCFNKALPLA 344
           R  L       +DEA++ I KAI +D + + AY   G I  +    + A+K F K + L 
Sbjct: 428 RG-LTNSYLNELDEALQYINKAIELDPNYINAYNERGLIHYRNSNYDLAIKDFKKVIELD 486

Query: 345 RDEAELSHIYSLRDAAIAQMKVCERY 370
            +    ++  +L   A+ + +   +Y
Sbjct: 487 NESVYANYHLALSYDALEEYETALKY 512


>gi|91200490|emb|CAJ73538.1| similar to N-acetylglucosaminyltransferases (O-GlcNAc transferase)
           [Candidatus Kuenenia stuttgartiensis]
          Length = 568

 Score = 68.6 bits (166), Expect = 9e-09,   Method: Compositional matrix adjust.
 Identities = 90/400 (22%), Positives = 169/400 (42%), Gaps = 54/400 (13%)

Query: 151 SDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIAL---NPNFHVA 207
           +++T+AF+ L E  K++P++A++YY    +Y    +  E+   L+K I L   NP+FH +
Sbjct: 137 NEYTEAFSALKECLKLNPSMAEAYYTMALLYLETNKINESFDYLNKAIKLDSNNPDFHFS 196

Query: 208 ------------RAQRHFVVHKMIVPGDRE-------------RVEQSLKEFRNFVDTHS 242
                       +A   F     + P D E              +E+++   +  V   +
Sbjct: 197 MGLAFYKKNMPEKALTEFQKTLDLNPRDAEAHNYLGIIYYEMNEIEKAISAHQTAVKLKN 256

Query: 243 NVVEACTLFAQVLVDQEDFDGAEEYFNRSIRVDPENASLYVHRAMLMLQARGNVDEAIKL 302
           N  +A       L    + + A++ F  ++++  + A  + +   L+L   GN  EAI  
Sbjct: 257 NYTDAYNNLGIALFAHNNLNEAKDAFETALKLRADFAEAHYNLG-LILSKEGNSKEAIAS 315

Query: 303 IEKAISIDKSCMFAYETLGTIEVQRGRLEEAVKCFNKALPLARDEAELSHIYSLRDAAIA 362
           +EKAI+I  +   A+  LG I  +    ++A+  +  A        E  + Y    A I 
Sbjct: 316 LEKAIAISNAIAPAHFKLGEIYTKINMPDKALSAYESAFSDDPSYEEAYYNYGELAAEIG 375

Query: 363 QM-KVCERYNIKKKVSPRSQNITKNEKLAI-KQLRENNDIIIRPADKGGKTVVMDKADYT 420
            + K    +    +++P + +   N  +A+  Q + +N I +       K +  +  DY 
Sbjct: 376 DVDKSIRAWKKTIEINPTNTDAYFNLGVALYNQGKIDNAISMW-----SKVLETNPDDY- 429

Query: 421 QKMTSILNSNDYEIIPGDPTKTIEESEK-----------YGNLENESGQKHAASDFTKAF 469
              T++ N  D     G   K I+  EK           Y  L N   +K+    +  A 
Sbjct: 430 ---TTLNNLADAYEAKGSIDKAIKTWEKIVEGHPVNSLVYYKLGNAYTKKN---KYNSAL 483

Query: 470 ADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKT 509
           A  ++A  +DP+  ++Y+  G+ Y   G+ +EA+    KT
Sbjct: 484 ACWEQAVIIDPDFVNAYFNLGKTYKKLGRLDEAIAAFSKT 523



 Score = 52.4 bits (124), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 41/191 (21%), Positives = 87/191 (45%), Gaps = 14/191 (7%)

Query: 149 AASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVAR 208
           A S +  AF+D       DP+  ++YY  G++    G  ++++R   KTI +NP      
Sbjct: 346 ALSAYESAFSD-------DPSYEEAYYNYGELAAEIGDVDKSIRAWKKTIEINP----TN 394

Query: 209 AQRHFVVHKMIVPGDRERVEQSLKEFRNFVDTHSNVVEACTLFAQVLVDQEDFDGAEEYF 268
              +F +   +   ++ +++ ++  +   ++T+ +        A     +   D A + +
Sbjct: 395 TDAYFNLG--VALYNQGKIDNAISMWSKVLETNPDDYTTLNNLADAYEAKGSIDKAIKTW 452

Query: 269 NRSIRVDPENASLYVHRAMLMLQARGNVDEAIKLIEKAISIDKSCMFAYETLGTIEVQRG 328
            + +   P N+ +Y ++       +   + A+   E+A+ ID   + AY  LG    + G
Sbjct: 453 EKIVEGHPVNSLVY-YKLGNAYTKKNKYNSALACWEQAVIIDPDFVNAYFNLGKTYKKLG 511

Query: 329 RLEEAVKCFNK 339
           RL+EA+  F+K
Sbjct: 512 RLDEAIAAFSK 522


>gi|376003786|ref|ZP_09781589.1| hypothetical protein ARTHRO_160012 [Arthrospira sp. PCC 8005]
 gi|375327817|emb|CCE17342.1| hypothetical protein ARTHRO_160012 [Arthrospira sp. PCC 8005]
          Length = 1104

 Score = 68.6 bits (166), Expect = 9e-09,   Method: Compositional matrix adjust.
 Identities = 88/398 (22%), Positives = 155/398 (38%), Gaps = 83/398 (20%)

Query: 151 SDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQ 210
            DF  A +  ++A ++ P+  +++Y RG    L G+YE+A+ + D+ +   P+ H A   
Sbjct: 163 GDFRGAISSWEKAIELKPDYHEAWYNRGLALSLLGEYEQAISSFDQALKYKPDDHEAWYN 222

Query: 211 RHFVVHKMIVPGDRERVEQSLKEFRNFVDTHSNVVEACTLFAQVLVDQEDFDGAEEYFNR 270
           R   +  +   G+ E                    +A + F Q L  + DF  A  + NR
Sbjct: 223 RGVALSLL---GELE--------------------QAISSFDQALKYKLDFHAA--WNNR 257

Query: 271 SIRVDPENASLYVHRAMLMLQARGNVDEAIKLIEKAISIDKSCMFAYETLGTIEVQRGRL 330
                  NA          L+  G  ++AI   ++A+        A+   G      G L
Sbjct: 258 G------NA----------LKDLGEYEQAISSYDQALKYKPDYHVAWNNRGLALSDLGEL 301

Query: 331 EEAVKCFNKALPLARD--EAELSHIYSLRDAAIAQMKVCERYNIKKKVSPRSQNITKNEK 388
           E+A+  +++AL   +D  EA  S   +L D    +  +   Y+   K  P       N  
Sbjct: 302 EKAISSYDQALTYKQDKHEAWYSRGNALSDLGEYEQAISS-YDQALKYKPDYHVAWNNRG 360

Query: 389 LAIKQLRENNDIIIRPADKGGKTVVMDKADYTQKMTSILNSNDYEIIPGDPTKTIEESEK 448
           LA+  L E    I               + Y Q +T      D+           E    
Sbjct: 361 LALSDLGELEKAI---------------SSYDQALTY---KPDFH----------EAWYS 392

Query: 449 YGNLENESGQKHAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDK 508
            GN  ++ G+      + +A +  D+A K  P+  ++++ RG      G+ E+A+ + D+
Sbjct: 393 RGNALSDLGE------YEQAISSYDQALKYKPDFHEAWFNRGLALYFLGELEQAISSYDQ 446

Query: 509 TIALNPNFHVARAQRHFVWTSTLAELMAFSDEFMIPKI 546
            +   P+ H A A R  V   +L      +  F++P I
Sbjct: 447 ALKYKPDKHEAWANRGNVAGQSLR-----TTPFIVPDI 479



 Score = 53.9 bits (128), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 40/197 (20%), Positives = 89/197 (45%), Gaps = 7/197 (3%)

Query: 145 VHLHAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNF 204
           V L    +  +A +  D+A K   +   ++  RG      G+YE+A+ + D+ +   P++
Sbjct: 225 VALSLLGELEQAISSFDQALKYKLDFHAAWNNRGNALKDLGEYEQAISSYDQALKYKPDY 284

Query: 205 HVARAQRHFVVHKMIVPGDRERVEQSLKEFRNFVDTHSNVVEACTLFAQVLVDQEDFDGA 264
           HVA   R   +       D   +E+++  +   +    +  EA       L D  +++ A
Sbjct: 285 HVAWNNRGLAL------SDLGELEKAISSYDQALTYKQDKHEAWYSRGNALSDLGEYEQA 338

Query: 265 EEYFNRSIRVDPENASLYVHRAMLMLQARGNVDEAIKLIEKAISIDKSCMFAYETLGTIE 324
              ++++++  P+    + +R  L L   G +++AI   ++A++       A+ + G   
Sbjct: 339 ISSYDQALKYKPDYHVAWNNRG-LALSDLGELEKAISSYDQALTYKPDFHEAWYSRGNAL 397

Query: 325 VQRGRLEEAVKCFNKAL 341
              G  E+A+  +++AL
Sbjct: 398 SDLGEYEQAISSYDQAL 414



 Score = 43.5 bits (101), Expect = 0.27,   Method: Compositional matrix adjust.
 Identities = 23/77 (29%), Positives = 40/77 (51%), Gaps = 1/77 (1%)

Query: 458 QKHAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFH 517
           Q+    DF  A +  ++A ++ P+  +++Y RG    L G+YE+A+ + D+ +   P+ H
Sbjct: 158 QRANNGDFRGAISSWEKAIELKPDYHEAWYNRGLALSLLGEYEQAISSFDQALKYKPDDH 217

Query: 518 VARAQRHFVWTSTLAEL 534
            A   R     S L EL
Sbjct: 218 EAWYNRGVA-LSLLGEL 233


>gi|168704732|ref|ZP_02737009.1| tetratricopeptide repeat protein [Gemmata obscuriglobus UQM 2246]
          Length = 607

 Score = 68.2 bits (165), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 102/473 (21%), Positives = 181/473 (38%), Gaps = 62/473 (13%)

Query: 79  TAIRHCTEEIESTSSNHTKALARLLRATVYIFTSQSTKAIEDLTQLVEDTSVDPKIKVNA 138
            A+   TE ++   +N T    R  R   Y       KAI DLT  +E T   P     A
Sbjct: 79  AALSDLTEALKRDPNNATT---RYYRGLAYAHLGWPEKAIADLTDFIEMT---PDF-APA 131

Query: 139 HIKRAVVHLHAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTI 198
              RA+   H    F KA AD +EA ++DP   ++   RG  +   GQ+++AL + ++ +
Sbjct: 132 FYNRALAFEH-VKQFDKALADYNEALRLDPKHTNALVGRGTAHATAGQFDKALADYNEAL 190

Query: 199 ALNPNFHVARAQRHFVVHKMIVPGDRERVEQSLKEFRNFVDTHSNVVEACTLFAQVLVDQ 258
            L+P   +A   R  ++ +      + R   +L +    V       E     +   + +
Sbjct: 191 RLDPKQSLAFFNRAALLFR------QGRWAATLTDLDEAVRLAPEKAEYLLFRSTCRMLR 244

Query: 259 EDFDGAEEYFNRSIRVDPENASLYVHRAMLMLQARGNVDEAIKLIEKAISIDKSCMFAY- 317
            + D A +  ++++R  P N    VHR+ + L AR N D A++ + + I +D +  FA+ 
Sbjct: 245 SELDEALKDADQAVRSAPRNPDARVHRSSVHL-ARSNWDAALRDLTEVILLDPNHRFAFL 303

Query: 318 ------------------------ETLGTIEVQR---------------GRLEEAVKCFN 338
                                   +  G +   +               G   +AVK  N
Sbjct: 304 NRAWVLASCPEAKHRDPAQAIKDADRAGELSGWKNPAAIEARAAAAAESGDFPDAVKWQN 363

Query: 339 KALPLARDEAELSHIYSLRDAAIAQMKVCERYNIKKKVSPRSQNITKNEKLAIKQLRENN 398
           KAL     +     +   R   +A  +  + Y  +   +P    +   E+ A    +   
Sbjct: 364 KALKHPGYDGPAGAVARAR---LALYEAGKPYRFQSPTAPNGAALL-FERGARWHAQGEF 419

Query: 399 DIIIRPADKGGKTVVMDKADYTQKMTSILNSNDYEIIPGDPTKTIEESEKYGNLENESGQ 458
           D  +   D   +    +   +  + +  L   DY+    D T++I     +    N+ G 
Sbjct: 420 DKALTDYDAAARLDPNNARIFYARGSVHLAMRDYDRAIKDLTESIRLDPTFVWAFNDRGA 479

Query: 459 -KHAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTI 510
            +     +  A  D DEA ++DP  A +   RG +    G  + ALR+  K +
Sbjct: 480 VRFVMGAWGAALGDFDEALRLDPKHATALANRGLLRAAAG--DAALRDATKAL 530



 Score = 60.1 bits (144), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 100/422 (23%), Positives = 177/422 (41%), Gaps = 55/422 (13%)

Query: 117 AIEDLTQLVEDTSVDPKIKVNAHIKRAVVHLHAASDFTKAFADLDEAEKVDPNVADSYYQ 176
           AI D T+ ++   +DP     A+  R   H    +D   A +DL EA K DPN A + Y 
Sbjct: 46  AIRDYTRAIK---LDPD-SAAAYSARGTAHQANGND-AAALSDLTEALKRDPNNATTRYY 100

Query: 177 RGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQRHFVVHKMIVPGDRERVEQSLKEFRN 236
           RG  Y   G  E+A+ +L   I + P+F  A   R      +      ++ +++L ++  
Sbjct: 101 RGLAYAHLGWPEKAIADLTDFIEMTPDFAPAFYNRALAFEHV------KQFDKALADYNE 154

Query: 237 FVDTHSNVVEACTLFAQVLVDQEDFDGAEEYFNRSIRVDPENASLYVHRAMLML-QARG- 294
            +        A             FD A   +N ++R+DP+ +  + +RA L+  Q R  
Sbjct: 155 ALRLDPKHTNALVGRGTAHATAGQFDKALADYNEALRLDPKQSLAFFNRAALLFRQGRWA 214

Query: 295 ----NVDEAIKLIEKAISIDKSCMFAYETLGTIEVQRGRLEEAVKCFNKAL------PLA 344
               ++DEA++L     + +K+    + +  T  + R  L+EA+K  ++A+      P A
Sbjct: 215 ATLTDLDEAVRL-----APEKAEYLLFRS--TCRMLRSELDEALKDADQAVRSAPRNPDA 267

Query: 345 RDEAELSHIY-SLRDAAIAQMKVCERYNIKKKVSPRSQNITKNEKLAIKQLRENNDI--I 401
           R      H+  S  DAA+  +       I    + R   + +   LA     ++ D    
Sbjct: 268 RVHRSSVHLARSNWDAALRDLTEV----ILLDPNHRFAFLNRAWVLASCPEAKHRDPAQA 323

Query: 402 IRPADKGGK-TVVMDKADYTQKMTSILNSNDYEIIPGDPTKTIEESEKYGNLENESGQKH 460
           I+ AD+ G+ +   + A    +  +   S D+     D  K   ++ K+   +  +G   
Sbjct: 324 IKDADRAGELSGWKNPAAIEARAAAAAESGDFP----DAVKWQNKALKHPGYDGPAGA-- 377

Query: 461 AASDFTKAFADLDEAEK-------VDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALN 513
                 +A   L EA K         PN A   ++RG  +   G++++AL + D    L+
Sbjct: 378 ----VARARLALYEAGKPYRFQSPTAPNGAALLFERGARWHAQGEFDKALTDYDAAARLD 433

Query: 514 PN 515
           PN
Sbjct: 434 PN 435



 Score = 56.6 bits (135), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 46/197 (23%), Positives = 87/197 (44%), Gaps = 7/197 (3%)

Query: 153 FTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQRH 212
           +  A  D   A K+DP+ A +Y  RG  +   G    AL +L + +  +PN    R  R 
Sbjct: 43  YEDAIRDYTRAIKLDPDSAAAYSARGTAHQANGNDAAALSDLTEALKRDPNNATTRYYRG 102

Query: 213 FVVHKMIVPGDRERVEQSLKEFRNFVDTHSNVVEACTLFAQVLVDQEDFDGAEEYFNRSI 272
                +  P      E+++ +  +F++   +   A    A      + FD A   +N ++
Sbjct: 103 LAYAHLGWP------EKAIADLTDFIEMTPDFAPAFYNRALAFEHVKQFDKALADYNEAL 156

Query: 273 RVDPENASLYVHRAMLMLQARGNVDEAIKLIEKAISIDKSCMFAYETLGTIEVQRGRLEE 332
           R+DP++ +  V R      A G  D+A+    +A+ +D     A+     +  ++GR   
Sbjct: 157 RLDPKHTNALVGRGTAHATA-GQFDKALADYNEALRLDPKQSLAFFNRAALLFRQGRWAA 215

Query: 333 AVKCFNKALPLARDEAE 349
            +   ++A+ LA ++AE
Sbjct: 216 TLTDLDEAVRLAPEKAE 232



 Score = 52.4 bits (124), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 30/87 (34%), Positives = 46/87 (52%), Gaps = 7/87 (8%)

Query: 455 ESGQK-HAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALN 513
           E G + HA  +F KA  D D A ++DPN A  +Y RG ++     Y+ A+++L ++I L+
Sbjct: 408 ERGARWHAQGEFDKALTDYDAAARLDPNNARIFYARGSVHLAMRDYDRAIKDLTESIRLD 467

Query: 514 PNFHVA---RAQRHFV---WTSTLAEL 534
           P F  A   R    FV   W + L + 
Sbjct: 468 PTFVWAFNDRGAVRFVMGAWGAALGDF 494



 Score = 42.0 bits (97), Expect = 0.95,   Method: Compositional matrix adjust.
 Identities = 25/76 (32%), Positives = 42/76 (55%), Gaps = 6/76 (7%)

Query: 465 FTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVA---RA 521
           F KA AD +EA ++DP   ++   RG  +   GQ+++AL + ++ + L+P   +A   RA
Sbjct: 145 FDKALADYNEALRLDPKHTNALVGRGTAHATAGQFDKALADYNEALRLDPKQSLAFFNRA 204

Query: 522 Q---RHFVWTSTLAEL 534
               R   W +TL +L
Sbjct: 205 ALLFRQGRWAATLTDL 220



 Score = 41.6 bits (96), Expect = 1.2,   Method: Compositional matrix adjust.
 Identities = 30/89 (33%), Positives = 41/89 (46%), Gaps = 1/89 (1%)

Query: 432 YEIIPGDPTKTIEESEKYGNLENESGQKHAA-SDFTKAFADLDEAEKVDPNVADSYYQRG 490
           YE    D T+ I+         +  G  H A  +   A +DL EA K DPN A + Y RG
Sbjct: 43  YEDAIRDYTRAIKLDPDSAAAYSARGTAHQANGNDAAALSDLTEALKRDPNNATTRYYRG 102

Query: 491 QIYCLFGQYEEALRNLDKTIALNPNFHVA 519
             Y   G  E+A+ +L   I + P+F  A
Sbjct: 103 LAYAHLGWPEKAIADLTDFIEMTPDFAPA 131



 Score = 39.7 bits (91), Expect = 4.2,   Method: Compositional matrix adjust.
 Identities = 21/71 (29%), Positives = 36/71 (50%), Gaps = 1/71 (1%)

Query: 457 GQKH-AASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPN 515
           G  H A  D+ +A  DL E+ ++DP    ++  RG +  + G +  AL + D+ + L+P 
Sbjct: 444 GSVHLAMRDYDRAIKDLTESIRLDPTFVWAFNDRGAVRFVMGAWGAALGDFDEALRLDPK 503

Query: 516 FHVARAQRHFV 526
              A A R  +
Sbjct: 504 HATALANRGLL 514


>gi|254417461|ref|ZP_05031201.1| tetratricopeptide repeat domain protein [Coleofasciculus
           chthonoplastes PCC 7420]
 gi|196175726|gb|EDX70750.1| tetratricopeptide repeat domain protein [Coleofasciculus
           chthonoplastes PCC 7420]
          Length = 374

 Score = 68.2 bits (165), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 49/194 (25%), Positives = 95/194 (48%), Gaps = 10/194 (5%)

Query: 151 SDFTK---AFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVA 207
           SD+ K   A A  D+  + +P   +++  RG    + G+ +EAL + D+ IA NPN+  A
Sbjct: 86  SDWGKHEAAIASFDQVIEREPTHPEAWNSRGTSLMILGRNKEALASFDQAIACNPNYDKA 145

Query: 208 RAQRHFVVHKMIVPGDRERVEQSLKEFRNFVDTHSNVVEACTLFAQVLVDQEDFDGAEEY 267
            + R  V+  +       R + +LK F   +    N  E       +L+  +  D A   
Sbjct: 146 WSNRGNVLTNL------GRHKAALKSFDKALHISPNHPEIWYNQGCLLMQLQKRDDAIAS 199

Query: 268 FNRSIRVDPENASLYVHRAMLMLQARGNVDEAIKLIEKAISIDKSCMFAYETLGTIEVQR 327
           FN+++ + P++   ++++ +++ +  G   EA+   EKA+  D +    +   G    + 
Sbjct: 200 FNKALELKPDHIGSWINKGIVISEM-GREKEALLYYEKALEFDPNETHCWNNRGLTMRRL 258

Query: 328 GRLEEAVKCFNKAL 341
           GRL++AV  +++AL
Sbjct: 259 GRLQDAVASYDRAL 272



 Score = 58.2 bits (139), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 77/379 (20%), Positives = 145/379 (38%), Gaps = 52/379 (13%)

Query: 150 ASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARA 209
             DF  A A   +A K+ P   +++   G       +YEEA+ + D+   LNP       
Sbjct: 20  GGDFDAAVALFQDAVKLTPENGEAWTGLGLALGHLQRYEEAIASFDQAGVLNPQ------ 73

Query: 210 QRHFVVHKMIVPGDRERVEQSLKEFRNFVDTHSNVVEACTLFAQVLVDQEDFDGAEEYFN 269
                +++ IV  D  + E ++  F   ++      EA       L+       A   F+
Sbjct: 74  DASIWLNRGIVLSDWGKHEAAIASFDQVIEREPTHPEAWNSRGTSLMILGRNKEALASFD 133

Query: 270 RSIRVDPENASLYVHRAMLMLQARGNVDEAIKLIEKAISIDKSCMFAYETLGTIEVQRGR 329
           ++I  +P     + +R  ++    G    A+K  +KA+ I  +    +   G + +Q  +
Sbjct: 134 QAIACNPNYDKAWSNRGNVLTNL-GRHKAALKSFDKALHISPNHPEIWYNQGCLLMQLQK 192

Query: 330 LEEAVKCFNKALPLARDEAELSHIYSLRDAAIAQMKVCER------YNIKKKVSPRSQNI 383
            ++A+  FNKAL L  D     HI S  +  I   ++         Y    +  P   + 
Sbjct: 193 RDDAIASFNKALELKPD-----HIGSWINKGIVISEMGREKEALLYYEKALEFDPNETHC 247

Query: 384 TKNEKLAIKQLRENNDIIIRPADKGGKTVVMDKADYTQKMTSILNSNDYEIIPGDPTKTI 443
             N  L +++L    D +               A Y + +         E +P       
Sbjct: 248 WNNRGLTMRRLGRLQDAV---------------ASYDRAL---------ECMP------- 276

Query: 444 EESEKYGNLENESGQKHAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEAL 503
              E Y   +N          + +A A  D+A +V+P+  ++ Y +G  Y   G+   A+
Sbjct: 277 ---ENYEAWDNRGYALVKMGRYREAMASFDKALEVNPDHVNAVYNKGYCYAAQGKVTLAV 333

Query: 504 RNLDKTIALNPNFHVARAQ 522
             +++ I +NP  ++  A+
Sbjct: 334 NYIEQAIKVNPQKYLPVAK 352



 Score = 58.2 bits (139), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 49/222 (22%), Positives = 105/222 (47%), Gaps = 13/222 (5%)

Query: 143 AVVHLHAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNP 202
           A+ HL     + +A A  D+A  ++P  A  +  RG +   +G++E A+ + D+ I   P
Sbjct: 50  ALGHLQ---RYEEAIASFDQAGVLNPQDASIWLNRGIVLSDWGKHEAAIASFDQVIEREP 106

Query: 203 NFHVARAQRHFVVHKMIVPGDRERVEQSLKEFRNFVDTHSNVVEACTLFAQVLVDQEDFD 262
               A   R   +  MI+     R +++L  F   +  + N  +A +    VL +     
Sbjct: 107 THPEAWNSRGTSL--MIL----GRNKEALASFDQAIACNPNYDKAWSNRGNVLTNLGRHK 160

Query: 263 GAEEYFNRSIRVDPENASLYVHRAMLMLQARGNVDEAIKLIEKAISIDKSCMFAYETLGT 322
            A + F++++ + P +  ++ ++  L++Q +   D+AI    KA+ +    + ++   G 
Sbjct: 161 AALKSFDKALHISPNHPEIWYNQGCLLMQLQ-KRDDAIASFNKALELKPDHIGSWINKGI 219

Query: 323 IEVQRGRLEEAVKCFNKALPLARDEAELSHIYSLRDAAIAQM 364
           +  + GR +EA+  + KAL    +E   +H ++ R   + ++
Sbjct: 220 VISEMGREKEALLYYEKALEFDPNE---THCWNNRGLTMRRL 258



 Score = 54.7 bits (130), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 50/246 (20%), Positives = 112/246 (45%), Gaps = 12/246 (4%)

Query: 155 KAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQRHFV 214
           +A A  D+A   +PN   ++  RG +    G+++ AL++ DK + ++PN       +  +
Sbjct: 127 EALASFDQAIACNPNYDKAWSNRGNVLTNLGRHKAALKSFDKALHISPNHPEIWYNQGCL 186

Query: 215 VHKMIVPGDRERVEQSLKEFRNFVDTHSNVVEACTLFAQVLVDQEDFDGAEEYFNRSIRV 274
           + ++      ++ + ++  F   ++   + + +      V+ +      A  Y+ +++  
Sbjct: 187 LMQL------QKRDDAIASFNKALELKPDHIGSWINKGIVISEMGREKEALLYYEKALEF 240

Query: 275 DPENASLYVHRAMLMLQARGNVDEAIKLIEKAISIDKSCMFAYETLGTIEVQRGRLEEAV 334
           DP     + +R + M +  G + +A+   ++A+        A++  G   V+ GR  EA+
Sbjct: 241 DPNETHCWNNRGLTMRRL-GRLQDAVASYDRALECMPENYEAWDNRGYALVKMGRYREAM 299

Query: 335 KCFNKALPLARDEAELSHIYSLRDAAIAQMKVCERYNIKK---KVSPRSQNITKNEKLAI 391
             F+KAL +  D   ++ +Y+      AQ KV    N  +   KV+P+           +
Sbjct: 300 ASFDKALEVNPD--HVNAVYNKGYCYAAQGKVTLAVNYIEQAIKVNPQKYLPVAKTDPDL 357

Query: 392 KQLREN 397
           ++LR+N
Sbjct: 358 ERLRKN 363



 Score = 40.8 bits (94), Expect = 1.8,   Method: Compositional matrix adjust.
 Identities = 30/96 (31%), Positives = 47/96 (48%), Gaps = 10/96 (10%)

Query: 463 SDFTK---AFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVA 519
           SD+ K   A A  D+  + +P   +++  RG    + G+ +EAL + D+ IA NPN+  A
Sbjct: 86  SDWGKHEAAIASFDQVIEREPTHPEAWNSRGTSLMILGRNKEALASFDQAIACNPNYDKA 145

Query: 520 RAQRHFVWTSTL---AELMAFSDEFMI----PKITY 548
            + R  V T+     A L +F     I    P+I Y
Sbjct: 146 WSNRGNVLTNLGRHKAALKSFDKALHISPNHPEIWY 181


>gi|386811383|ref|ZP_10098609.1| conserved hypothetical protein [planctomycete KSU-1]
 gi|386406107|dbj|GAB61490.1| conserved hypothetical protein [planctomycete KSU-1]
          Length = 609

 Score = 68.2 bits (165), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 77/381 (20%), Positives = 163/381 (42%), Gaps = 35/381 (9%)

Query: 147 LHAASDFTK------AFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIAL 200
           +H  +DF +      AF   + A ++ P+  +++Y +  I   FG+Y +A+ + +K I  
Sbjct: 32  IHKGNDFVRNQMYQEAFDAYENALQIKPDAFEAWYNKAIILDYFGKYADAIESFEKAIQY 91

Query: 201 NPNFHVARAQRHFVVHKMIVPGDRERVEQSLKEFRNFVDTHSNVVEACTLFAQVLVDQED 260
            P+++ A   +  V+          R ++++K F   ++   + V A      VL     
Sbjct: 92  KPDYYEAWYMKGRVLDHA------GRYDEAVKAFDKALEIKPDYVTALYNKGNVLDHIGS 145

Query: 261 FDGAEEYFNRSIRVDPENASLYVHRAMLMLQARGNVDEAIKLIEKAISIDKSCMFAYETL 320
            D A + ++R I++  +    + ++ + + +     +EA+   +KAI+I+     A+   
Sbjct: 146 IDMAIDTYDRIIKIKSDAYEAWNNKGLALAKIPERRNEALDAYDKAIAINPKYYEAWINK 205

Query: 321 GTIEVQRGRLEEAVKCFNKALPLARDE--AELSHIYSLRDAAIAQMKVCERYNIKKKVSP 378
           G   V+  + +EAV  +++A+ +   E  A     ++L D    +  V   +N   ++ P
Sbjct: 206 GNCFVRLRKYQEAVHAYDQAIEIKPSEHAAWADKGFTLADLGKYEDAVYA-FNKAIELKP 264

Query: 379 RSQNITKNEKLAIKQLRENND--------IIIRPADKGGKTVVMDKADYTQKMTSILNSN 430
            S      + LA+  L    +        I I+P   G          +T K  ++  + 
Sbjct: 265 DSYGAWNGKGLALDALGRYEEALAAYEKTIEIQPNSYGA---------WTNKGLALSRTG 315

Query: 431 DYE--IIPGDPTKTIEESEKYGNLENESGQKHAASDFTKAFADLDEAEKVDPNVADSYYQ 488
            +E  I+  +    I + + Y  + N+ G+      +  A   LD A K+ P+    +  
Sbjct: 316 KHEDAILAYEKALQI-QPDSYETMTNKGGELFHMGRYEAAIKVLDNAIKLRPDYPQVWNS 374

Query: 489 RGQIYCLFGQYEEALRNLDKT 509
           +G      G++ EA+++ DK 
Sbjct: 375 KGWALLRLGRFMEAMKSFDKV 395



 Score = 53.1 bits (126), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 78/384 (20%), Positives = 158/384 (41%), Gaps = 44/384 (11%)

Query: 161 DEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQRHFVVHKMIV 220
           D+A  ++P   +++  +G  +    +Y+EA+   D+ I + P+ H A A + F +     
Sbjct: 189 DKAIAINPKYYEAWINKGNCFVRLRKYQEAVHAYDQAIEIKPSEHAAWADKGFTL----- 243

Query: 221 PGDRERVEQSLKEFRNFVDTHSNVVEACTLFAQVLVDQEDFDGAEEYFNRSIRVDPENAS 280
             D  + E ++  F   ++   +   A       L     ++ A   + ++I + P +  
Sbjct: 244 -ADLGKYEDAVYAFNKAIELKPDSYGAWNGKGLALDALGRYEEALAAYEKTIEIQPNSYG 302

Query: 281 LYVHRAMLMLQARGNVDEAIKLIEKAISIDKSCMFAYETL---GTIEVQRGRLEEAVKCF 337
            + ++  L L   G  ++AI   EKA+ I      +YET+   G      GR E A+K  
Sbjct: 303 AWTNKG-LALSRTGKHEDAILAYEKALQIQPD---SYETMTNKGGELFHMGRYEAAIKVL 358

Query: 338 NKALPLARDEAELSHIYSLRDAAIAQM-KVCERYNIKKKVSP-----RSQNITKNEKLAI 391
           + A+ L  D      +++ +  A+ ++ +  E      KV+       + NI +  K+  
Sbjct: 359 DNAIKLRPD---YPQVWNSKGWALLRLGRFMEAMKSFDKVAQIITDEEAMNIPRLAKIKY 415

Query: 392 KQLRENNDIIIRPADKGGKTVVMDKAD---------YTQKMTSILNSNDYE--IIPGDPT 440
           + L      +I+  +      V +KA          +  K   ++    YE  +   D  
Sbjct: 416 EALSNKGLALIQLQNYEEAVKVFEKALSLKPDVFSLWINKGLCLVQLKKYEEALNAFDKA 475

Query: 441 KT----IEESEKY-GNLENESGQKHAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCL 495
            T    + E+  Y G +  E G++  A D        D+A K  P+   +   +G +  +
Sbjct: 476 ATLSGNVHEAWNYKGYVFEEIGKQLEALD------AYDKAIKTKPDFFGALNNKGLLLDV 529

Query: 496 FGQYEEALRNLDKTIALNPNFHVA 519
            G ++EA+   ++ + + P+F  A
Sbjct: 530 VGNHKEAIEAYNQALRIKPDFDAA 553



 Score = 50.1 bits (118), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 68/289 (23%), Positives = 117/289 (40%), Gaps = 35/289 (12%)

Query: 258 QEDFDGAEEYFNRSIRVDPENASLYVHRAMLMLQARGNVDEAIKLIEKAISIDKSCMFAY 317
           QE FD  E     ++++ P+    + ++A++ L   G   +AI+  EKAI        A+
Sbjct: 45  QEAFDAYE----NALQIKPDAFEAWYNKAII-LDYFGKYADAIESFEKAIQYKPDYYEAW 99

Query: 318 ETLGTIEVQRGRLEEAVKCFNKALPLARDEAE--------LSHIYSLRDAAIAQMKVCER 369
              G +    GR +EAVK F+KAL +  D           L HI S+ D AI      + 
Sbjct: 100 YMKGRVLDHAGRYDEAVKAFDKALEIKPDYVTALYNKGNVLDHIGSI-DMAI------DT 152

Query: 370 YNIKKKVSPRSQNITKNEKLAIKQLRENNDIIIRPADKGGKTVVMDKADYTQKMTSILNS 429
           Y+   K+   +     N+ LA+ ++ E  +  +   DK           +  K    +  
Sbjct: 153 YDRIIKIKSDAYEAWNNKGLALAKIPERRNEALDAYDKAIAINPKYYEAWINKGNCFVRL 212

Query: 430 NDYE--------IIPGDPTKTIEESEKYGNLENESGQKHAASDFTKAFADLDEAEKVDPN 481
             Y+         I   P++    ++K   L +    + A   F KA        ++ P+
Sbjct: 213 RKYQEAVHAYDQAIEIKPSEHAAWADKGFTLADLGKYEDAVYAFNKAI-------ELKPD 265

Query: 482 VADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQRHFVWTST 530
              ++  +G      G+YEEAL   +KTI + PN + A   +    + T
Sbjct: 266 SYGAWNGKGLALDALGRYEEALAAYEKTIEIQPNSYGAWTNKGLALSRT 314



 Score = 45.4 bits (106), Expect = 0.079,   Method: Compositional matrix adjust.
 Identities = 55/296 (18%), Positives = 124/296 (41%), Gaps = 15/296 (5%)

Query: 228 EQSLKEFRNFVDTHSNVVEACTLFAQVLVDQEDFDGAEEYFNRSIRVDPENASLYVHRAM 287
           +++   + N +    +  EA    A +L     +  A E F ++I+  P+    +  +  
Sbjct: 45  QEAFDAYENALQIKPDAFEAWYNKAIILDYFGKYADAIESFEKAIQYKPDYYEAWYMKGR 104

Query: 288 LMLQARGNVDEAIKLIEKAISIDKSCMFAYETLGTIEVQRGRLEEAVKCFNKALPLARDE 347
           ++  A G  DEA+K  +KA+ I    + A    G +    G ++ A+  +++ + +  D 
Sbjct: 105 VLDHA-GRYDEAVKAFDKALEIKPDYVTALYNKGNVLDHIGSIDMAIDTYDRIIKIKSDA 163

Query: 348 AELSHIYSLRDAAIAQMKVCER-------YNIKKKVSPRSQNITKNEKLAIKQLRENNDI 400
            E     +  +  +A  K+ ER       Y+    ++P+      N+     +LR+  + 
Sbjct: 164 YE-----AWNNKGLALAKIPERRNEALDAYDKAIAINPKYYEAWINKGNCFVRLRKYQEA 218

Query: 401 IIRPADKGGKTVVMDKADYTQKMTSILNSNDYEIIPGDPTKTIE-ESEKYGNLENESGQK 459
           +    D+  +    + A +  K  ++ +   YE       K IE + + YG    +    
Sbjct: 219 V-HAYDQAIEIKPSEHAAWADKGFTLADLGKYEDAVYAFNKAIELKPDSYGAWNGKGLAL 277

Query: 460 HAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPN 515
            A   + +A A  ++  ++ PN   ++  +G      G++E+A+   +K + + P+
Sbjct: 278 DALGRYEEALAAYEKTIEIQPNSYGAWTNKGLALSRTGKHEDAILAYEKALQIQPD 333


>gi|440755624|ref|ZP_20934826.1| tetratricopeptide repeat family protein [Microcystis aeruginosa
           TAIHU98]
 gi|440175830|gb|ELP55199.1| tetratricopeptide repeat family protein [Microcystis aeruginosa
           TAIHU98]
          Length = 971

 Score = 68.2 bits (165), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 46/200 (23%), Positives = 97/200 (48%), Gaps = 11/200 (5%)

Query: 94  NHTKALARLLRATVYIFTSQSTKAIEDLTQLVEDTSVDPKIKVNAHIKRAVVHLHAASDF 153
           N   A+A   R  +Y    +   A+ D ++ ++   ++P     A+  R +++ +    +
Sbjct: 741 NRNDAVAYYNRGLLYYNQQKYDLALSDYSKAID---INPN-DAEAYYNRGILY-YNQRKY 795

Query: 154 TKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQRHF 213
             A +D  +A  ++PN A++Y  RG +Y    +YE AL + ++ I +NPNF +A   R  
Sbjct: 796 DLALSDYSKAIDINPNYAEAYNNRGLLYYNLQKYELALADYNQAIRINPNFALAYNNRGN 855

Query: 214 VVHKMIVPGDRERVEQSLKEFRNFVDTHSNVVEACTLFAQVLVDQEDFDGAEEYFNRSIR 273
           +        D ++ + +L ++   +D + N   A      +  +Q+ +D A   +N++I 
Sbjct: 856 LYS------DLQKYDLALSDYSKAIDINRNYAYAYVNRGVLYYNQQKYDLALSDYNKAIE 909

Query: 274 VDPENASLYVHRAMLMLQAR 293
           ++P  A  Y++R ++    R
Sbjct: 910 INPNYAYAYINRGVVYALTR 929



 Score = 67.4 bits (163), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 53/213 (24%), Positives = 101/213 (47%), Gaps = 15/213 (7%)

Query: 138 AHIKRAVVHLHAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKT 197
           A+  R +++ +    +  A +D  +A  ++PN A++YY RG +Y    +Y+ AL +  K 
Sbjct: 747 AYYNRGLLY-YNQQKYDLALSDYSKAIDINPNDAEAYYNRGILYYNQRKYDLALSDYSKA 805

Query: 198 IALNPNFHVARAQRHFVVHKMIVPGDRERVEQSLKEFRNFVDTHSNVVEACTLFAQVLVD 257
           I +NPN+  A   R  + + +      ++ E +L ++   +  + N   A      +  D
Sbjct: 806 IDINPNYAEAYNNRGLLYYNL------QKYELALADYNQAIRINPNFALAYNNRGNLYSD 859

Query: 258 QEDFDGAEEYFNRSIRVDPENASLYVHRAMLMLQARGNVDEAIKLIEKAISIDKSCMFAY 317
            + +D A   ++++I ++   A  YV+R +L    +   D A+    KAI I+ +  +AY
Sbjct: 860 LQKYDLALSDYSKAIDINRNYAYAYVNRGVLYYNQQ-KYDLALSDYNKAIEINPNYAYAY 918

Query: 318 ETLGTIEVQRGRLEEAVKCFNKALPLARDEAEL 350
                  + RG +    + F KAL  A   +EL
Sbjct: 919 -------INRGVVYALTREFPKALADAEKASEL 944



 Score = 61.6 bits (148), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 80/399 (20%), Positives = 174/399 (43%), Gaps = 39/399 (9%)

Query: 163 AEKVDPNV---ADSYYQRGQIYCLFGQYEEALRNLDKTIALNP--NFHVARAQRHFVVHK 217
           A  + PN    AD + +RG       + EEA++  D+ I  N   N ++A   +   +  
Sbjct: 522 AGVIVPNTNAKADIWIERGGQLWRLRRSEEAIKAFDEAIKQNDPDNVYLAWYGKGLALFA 581

Query: 218 MIVPGDRERVEQSLKEFRNFVDT----------HSNVVEACTLFAQVLVDQEDFDGAEEY 267
           +      ++ + +++  +  ++T          HS++++  ++  + L   E+++ A   
Sbjct: 582 L------DKYQPAIEALQQAINTLPKGEDLKEFHSSILQKQSVVYRYL---ENYEQALSV 632

Query: 268 FNRSIRVDPENASLYVHRAMLMLQARGNVDEAIKLIEKAISIDKSCMFAYETLGTIEVQR 327
            N++I + P N + Y  + +++ + +   DE +  I +AI +     + Y   G +    
Sbjct: 633 INQAISLVPNNPNYYNEKYVVLSRLK-RYDEGLAAITQAIDLAPRAAW-YFNRGNLYYNL 690

Query: 328 GRLEEAVKCFNKALPLARDEAELSHIYSLRDAAIAQMKVCERYNIKKKVSPRSQNITKNE 387
            + + A+  +NKA+ +  + AE    Y  R    + +   ++Y++      ++ +I +N+
Sbjct: 691 QKYDLALSDWNKAIKINPNYAE---AYVNRGNLYSDL---QKYDLALSDYSKAIDINRND 744

Query: 388 KLA------IKQLRENNDIIIRPADKGGKTVVMDKADYTQKMTSILNSNDYEIIPGDPTK 441
            +A      +   ++  D+ +    K       D   Y  +     N   Y++   D +K
Sbjct: 745 AVAYYNRGLLYYNQQKYDLALSDYSKAIDINPNDAEAYYNRGILYYNQRKYDLALSDYSK 804

Query: 442 TIEESEKYGNLENESGQ-KHAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYE 500
            I+ +  Y    N  G   +    +  A AD ++A +++PN A +Y  RG +Y    +Y+
Sbjct: 805 AIDINPNYAEAYNNRGLLYYNLQKYELALADYNQAIRINPNFALAYNNRGNLYSDLQKYD 864

Query: 501 EALRNLDKTIALNPNFHVARAQRHFVWTSTLAELMAFSD 539
            AL +  K I +N N+  A   R  ++ +     +A SD
Sbjct: 865 LALSDYSKAIDINRNYAYAYVNRGVLYYNQQKYDLALSD 903



 Score = 60.1 bits (144), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 79/356 (22%), Positives = 147/356 (41%), Gaps = 51/356 (14%)

Query: 180 IYCLFGQYEEALRNLDKTIALNPNFHVARAQRHFVVHKMIVPGDRERVEQSLKEFRNFVD 239
           +Y     YE+AL  +++ I+L PN      +++ V+ ++      +R ++ L      +D
Sbjct: 619 VYRYLENYEQALSVINQAISLVPNNPNYYNEKYVVLSRL------KRYDEGLAAITQAID 672

Query: 240 THSNVVEACTLF--AQVLVDQEDFDGAEEYFNRSIRVDPENASLYVHRAMLMLQARGNVD 297
                  A   F    +  + + +D A   +N++I+++P  A  YV+R  L    +   D
Sbjct: 673 LAP---RAAWYFNRGNLYYNLQKYDLALSDWNKAIKINPNYAEAYVNRGNLYSDLQ-KYD 728

Query: 298 EAIKLIEKAISIDKSCMFAYETLGTIEVQRGRLEEAVKCFNKALPLARDEAELSHIYSLR 357
            A+    KAI I+++   AY   G +   + + + A+  ++KA+ +  ++AE  +     
Sbjct: 729 LALSDYSKAIDINRNDAVAYYNRGLLYYNQQKYDLALSDYSKAIDINPNDAEAYY----- 783

Query: 358 DAAIAQMKVCERYNIKKKVSPRSQNITKNEKLAIKQLRENNDIIIRPADKGGKTVVMDKA 417
                  +    YN +K              LA+    +  DI    A+           
Sbjct: 784 ------NRGILYYNQRKY------------DLALSDYSKAIDINPNYAEA---------- 815

Query: 418 DYTQKMTSILNSNDYEIIPGDPTKTIEESEKYGNLENESGQKHAASDFTK---AFADLDE 474
            Y  +     N   YE+   D  + I  +  +    N  G  +  SD  K   A +D  +
Sbjct: 816 -YNNRGLLYYNLQKYELALADYNQAIRINPNFALAYNNRGNLY--SDLQKYDLALSDYSK 872

Query: 475 AEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQRHFVWTST 530
           A  ++ N A +Y  RG +Y    +Y+ AL + +K I +NPN+  A   R  V+  T
Sbjct: 873 AIDINRNYAYAYVNRGVLYYNQQKYDLALSDYNKAIEINPNYAYAYINRGVVYALT 928


>gi|347735989|ref|ZP_08868740.1| hypothetical protein AZA_56144 [Azospirillum amazonense Y2]
 gi|346920650|gb|EGY01669.1| hypothetical protein AZA_56144 [Azospirillum amazonense Y2]
          Length = 1087

 Score = 68.2 bits (165), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 51/197 (25%), Positives = 87/197 (44%), Gaps = 7/197 (3%)

Query: 147 LHAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHV 206
           L  A  FT+A AD D+A  +DP +  +   RG  +   GQ E A ++ D+  A++P    
Sbjct: 675 LMGAQKFTEALADFDKALALDPKMVTAIADRGIAHYWMGQLELAEQDFDRGYAIDPRNAY 734

Query: 207 ARAQRHFVVHKMIVPGDRERVEQSLKEFRNFVDTHSNVVEACTLFAQVLVDQEDFDGAEE 266
               R  V  K      RE +++++  F   ++  +N        AQ     +D+D A  
Sbjct: 735 VFQGRGLVALK------REHLKEAVVAFSTSLEIDANNDFTLKYRAQAYAQMKDWDHALA 788

Query: 267 YFNRSIRVDPENASLYVHRAMLMLQARGNVDEAIKLIEKAISIDKSCMFAYETLGTIEVQ 326
             +  + + P+    Y HRA +        D+A+    + +  + +   AY T GTI  Q
Sbjct: 789 DLDAVLHLHPDWLDGYAHRAQIFTVMEAT-DQALAEARRVVEANPAAATAYITSGTIYRQ 847

Query: 327 RGRLEEAVKCFNKALPL 343
            G  +EA +   ++L L
Sbjct: 848 LGHKDEATRMLTRSLEL 864


>gi|399023126|ref|ZP_10725193.1| cytochrome c biogenesis factor [Chryseobacterium sp. CF314]
 gi|398083685|gb|EJL74390.1| cytochrome c biogenesis factor [Chryseobacterium sp. CF314]
          Length = 237

 Score = 68.2 bits (165), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 53/194 (27%), Positives = 90/194 (46%), Gaps = 7/194 (3%)

Query: 151 SDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQ 210
           SDF  A  + + + + DPN A++YY     Y + G   +A+    K+I LN +F +A A+
Sbjct: 37  SDFRNAQKEFESSIQKDPNNANAYYGLALTYSVAGDNSKAIDYFTKSIELNSDFTLAYAE 96

Query: 211 RHFVVHKMIVPGDRERVEQSLKEFRNFVDTHSNVVEACTLFAQVLVDQEDFDGAEEYFNR 270
           R  +    +  GD     Q+ K+F   V    ++V       Q+ +   ++  A   F  
Sbjct: 97  RGTL---YLNSGD---FRQAKKDFNKVVTLAPDLVVPYLYLGQIEIQNSNYQEAISNFEE 150

Query: 271 SIRVDPENASLYVHRAMLMLQARGNVDEAIKLIEKAISIDKSCMFAYETLGTIEVQRGRL 330
            ++ DP+NA+ Y+ +  +    +G+   AI  I K+I ++     AY   GT E Q    
Sbjct: 151 VLKRDPKNATAYLSKG-ISEGTQGDYKNAISSITKSIELNPKNAIAYVYKGTFEFQNKMS 209

Query: 331 EEAVKCFNKALPLA 344
           + A   F+KA  L 
Sbjct: 210 DAACTDFHKAEELG 223



 Score = 50.8 bits (120), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 31/89 (34%), Positives = 45/89 (50%), Gaps = 1/89 (1%)

Query: 258 QEDFDGAEEYFNRSIRVDPENASLYVHRAMLMLQARGNVDEAIKLIEKAISIDKSCMFAY 317
           + DF  A++ F  SI+ DP NA+ Y   A L     G+  +AI    K+I ++     AY
Sbjct: 36  ESDFRNAQKEFESSIQKDPNNANAYYGLA-LTYSVAGDNSKAIDYFTKSIELNSDFTLAY 94

Query: 318 ETLGTIEVQRGRLEEAVKCFNKALPLARD 346
              GT+ +  G   +A K FNK + LA D
Sbjct: 95  AERGTLYLNSGDFRQAKKDFNKVVTLAPD 123



 Score = 40.0 bits (92), Expect = 3.6,   Method: Compositional matrix adjust.
 Identities = 21/68 (30%), Positives = 38/68 (55%)

Query: 463 SDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQ 522
           SDF  A  + + + + DPN A++YY     Y + G   +A+    K+I LN +F +A A+
Sbjct: 37  SDFRNAQKEFESSIQKDPNNANAYYGLALTYSVAGDNSKAIDYFTKSIELNSDFTLAYAE 96

Query: 523 RHFVWTST 530
           R  ++ ++
Sbjct: 97  RGTLYLNS 104


>gi|15669536|ref|NP_248347.1| O-linked GlnNAc transferase [Methanocaldococcus jannaschii DSM
           2661]
 gi|2842595|sp|Q58741.1|Y1345_METJA RecName: Full=TPR repeat-containing protein MJ1345
 gi|1591987|gb|AAB99354.1| O-linked GlnNAc transferase [Methanocaldococcus jannaschii DSM
           2661]
          Length = 314

 Score = 68.2 bits (165), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 53/244 (21%), Positives = 116/244 (47%), Gaps = 14/244 (5%)

Query: 99  LARLLRATVYIFTSQSTKAIEDLTQLVEDTSVDPKIK-VNAHIKRAVVHLHAASDFTKAF 157
           LA  L+  + +   +  +A E   +L      D  +K V A I      L    ++  A 
Sbjct: 80  LANFLKGALLVSLGKLEEAKEVFLKLCRLEKSDLPVKYVTAFI------LKKLGEYDYAL 133

Query: 158 ADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQRHFVVHK 217
             +D+  K  P  A ++ ++G+I    G+ +++L   D  + +NP    +   +  ++ K
Sbjct: 134 KIIDKILKKYPKSAIAWAEKGEILYREGKLKKSLECFDNALKINPKDCQSLLYKGEILFK 193

Query: 218 MIVPGDRERVEQSLKEFRNFVDTHSNVVEACTLFAQVLVDQEDFDGAEEYFNRSIRVDPE 277
           +       R  ++LK  +   + ++  + A     Q+L+     + A EY  ++++++P+
Sbjct: 194 L------GRYGEALKCLKKVFERNNKDIRALMYIIQILIYLGRLNQALEYTKKALKLNPD 247

Query: 278 NASLYVHRAMLMLQARGNVDEAIKLIEKAISIDKSCMFAYETLGTIEVQRGRLEEAVKCF 337
           +  LY+++ + +L   G  +EAIK  +K + I+ +   A+        + G++ EA++C+
Sbjct: 248 DPLLYLYKGI-ILNKLGKYNEAIKYFDKVLEINPNIPDAWNGKAIALEKLGKINEAIECY 306

Query: 338 NKAL 341
           N+AL
Sbjct: 307 NRAL 310



 Score = 40.0 bits (92), Expect = 3.2,   Method: Compositional matrix adjust.
 Identities = 40/191 (20%), Positives = 93/191 (48%), Gaps = 12/191 (6%)

Query: 152 DFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQR 211
           ++ KA   +D+  +V  +  D Y ++ +I    G+ ++AL   DK + L P + +A    
Sbjct: 27  NYEKALLLIDKILEVRES-PDVYVRKARILRTLGENDKALEYFDKALKLKPKYILA---- 81

Query: 212 HFVVHKMIVPGDRERVEQSLKEFRNFVDTHSNVVEACTLFAQVLVDQEDFDGAEEYFNRS 271
           +F+   ++V     ++E++ + F        + +    + A +L    ++D A +  ++ 
Sbjct: 82  NFLKGALLV--SLGKLEEAKEVFLKLCRLEKSDLPVKYVTAFILKKLGEYDYALKIIDKI 139

Query: 272 IRVDPENASLYVHRAMLMLQARGNVDEAIKLIEKAISID-KSCM-FAYETLGTIEVQRGR 329
           ++  P++A  +  +  ++ +  G + ++++  + A+ I+ K C    Y+  G I  + GR
Sbjct: 140 LKKYPKSAIAWAEKGEILYR-EGKLKKSLECFDNALKINPKDCQSLLYK--GEILFKLGR 196

Query: 330 LEEAVKCFNKA 340
             EA+KC  K 
Sbjct: 197 YGEALKCLKKV 207



 Score = 40.0 bits (92), Expect = 3.5,   Method: Compositional matrix adjust.
 Identities = 42/219 (19%), Positives = 96/219 (43%), Gaps = 9/219 (4%)

Query: 137 NAHIKRAVVHLHAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDK 196
           + ++++A + L    +  KA    D+A K+ P    + + +G +    G+ EEA     K
Sbjct: 46  DVYVRKARI-LRTLGENDKALEYFDKALKLKPKYILANFLKGALLVSLGKLEEAKEVFLK 104

Query: 197 TIALNPNFHVARAQRHFVVHKMIVPGDRERVEQSLKEFRNFVDTHSNVVEACTLFAQVLV 256
              L  +    +    F++ K+         + +LK     +  +     A     ++L 
Sbjct: 105 LCRLEKSDLPVKYVTAFILKKL------GEYDYALKIIDKILKKYPKSAIAWAEKGEILY 158

Query: 257 DQEDFDGAEEYFNRSIRVDPENASLYVHRAMLMLQARGNVDEAIKLIEKAISIDKSCMFA 316
            +     + E F+ +++++P++    +++  ++ +  G   EA+K ++K    +   + A
Sbjct: 159 REGKLKKSLECFDNALKINPKDCQSLLYKGEILFKL-GRYGEALKCLKKVFERNNKDIRA 217

Query: 317 YETLGTIEVQRGRLEEAVKCFNKALPLARDEAELSHIYS 355
              +  I +  GRL +A++   KAL L  D+  L ++Y 
Sbjct: 218 LMYIIQILIYLGRLNQALEYTKKALKLNPDDP-LLYLYK 255


>gi|186682238|ref|YP_001865434.1| hypothetical protein Npun_R1829 [Nostoc punctiforme PCC 73102]
 gi|186464690|gb|ACC80491.1| TPR repeat-containing protein [Nostoc punctiforme PCC 73102]
          Length = 539

 Score = 68.2 bits (165), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 69/267 (25%), Positives = 120/267 (44%), Gaps = 30/267 (11%)

Query: 108 YIFTSQSTKAIEDLTQLVEDTSVDPKIKVNAHIKRAVVHLHAASDFTKAFADLDEAEKVD 167
           Y    + T AI +  + ++ TS D    +N + KR + H +   D+  A AD  +A +++
Sbjct: 255 YFEKGEYTNAIVNYGKALKVTSSD----INLYYKRGLTH-YQIGDYEAAIADYSQAIQMN 309

Query: 168 PNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQR-HFVVHKMIVPGDRER 226
              A SY +RG      G+ EEA+ +  + I +NPN  VA   R     H     G  E 
Sbjct: 310 IQDAKSYNKRGLALSQLGRLEEAINDYTQAIRINPNVAVAYKNRAEARSHIGDNQGAIED 369

Query: 227 VEQSLKEFRNFVDTHSN------VVEACTLFAQVL-----------------VDQEDFDG 263
             Q++K   ++ D + N      ++ +   F Q +                  D  DF+G
Sbjct: 370 YTQAIKINPHYADAYKNRGIARYLLSSQPGFPQAIKINPKDAIAYKKRGNARSDLGDFEG 429

Query: 264 AEEYFNRSIRVDPENASLYVHRAMLMLQARGNVDEAIKLIEKAISIDKSCMFAYETLGTI 323
           A E + ++I+++P  A  Y +R        G+ + AI+   +AI I+ +   AY   G I
Sbjct: 430 AIEDYTQAIQINPNYADAYYNRDNAH-SDLGDFERAIEDYTQAIQINYNYADAYYNRGNI 488

Query: 324 EVQRGRLEEAVKCFNKALPLARDEAEL 350
            ++    + A++ F+KA  + R E +L
Sbjct: 489 RLEIADKQGAIEDFHKAADIYRKEGKL 515



 Score = 55.1 bits (131), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 65/297 (21%), Positives = 124/297 (41%), Gaps = 49/297 (16%)

Query: 234 FRNFVDTHSNVVEACTLFAQV---LVDQEDFDGAEEYFNRSIRVDPENASLYVHRAMLML 290
            ++F     N  ++ TL+A++     ++ ++  A   + ++++V   + +LY  R +   
Sbjct: 231 LKSFFQPEYNNEDSNTLYAKLGDEYFEKGEYTNAIVNYGKALKVTSSDINLYYKRGLTHY 290

Query: 291 QARGNVDEAIKLIEKAISIDKSCMFAYETLGTIEVQRGRLEEAVKCFNKALPLARDEAEL 350
           Q  G+ + AI    +AI ++     +Y   G    Q GRLEEA+  + +A+   R    +
Sbjct: 291 QI-GDYEAAIADYSQAIQMNIQDAKSYNKRGLALSQLGRLEEAINDYTQAI---RINPNV 346

Query: 351 SHIYSLRDAAIAQMK----VCERYNIKKKVSPRSQNITKNEKLAIKQLRENNDIIIRPAD 406
           +  Y  R  A + +       E Y    K++P   +  KN  +A                
Sbjct: 347 AVAYKNRAEARSHIGDNQGAIEDYTQAIKINPHYADAYKNRGIA---------------- 390

Query: 407 KGGKTVVMDKADYTQKMTSILNSNDYEIIPGDPTKTIEESEKYGNLENESGQKHAASDFT 466
              + ++  +  + Q +         +I P D        +K GN  ++ G      DF 
Sbjct: 391 ---RYLLSSQPGFPQAI---------KINPKDAIAY----KKRGNARSDLG------DFE 428

Query: 467 KAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQR 523
            A  D  +A +++PN AD+YY R   +   G +E A+ +  + I +N N+  A   R
Sbjct: 429 GAIEDYTQAIQINPNYADAYYNRDNAHSDLGDFERAIEDYTQAIQINYNYADAYYNR 485


>gi|404475555|ref|YP_006706986.1| hypothetical protein B2904_orf895 [Brachyspira pilosicoli B2904]
 gi|404437044|gb|AFR70238.1| TPR domain-containing protein [Brachyspira pilosicoli B2904]
          Length = 318

 Score = 68.2 bits (165), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 59/215 (27%), Positives = 107/215 (49%), Gaps = 10/215 (4%)

Query: 145 VHLHAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNF 204
           ++  A  ++ +A    DEA K++PN+AD+YY +          +EA+   DK I L  ++
Sbjct: 106 IYKSANGEYAEAIKYYDEAIKLNPNMADAYYNKAIAKTKLVLLKEAIEEYDKAIELRADY 165

Query: 205 HVARAQRHFVVHKMIVPGDRERVEQSLKEFRNFVDTHSNVVEACTLFAQVLVDQEDF-DG 263
             A   R       ++  D   +E+++K+F   +    N+ +A      +L D+  F   
Sbjct: 166 TYAYYNRG------LLKSDLGLLEEAIKDFDKALSIDPNLFDAYN-NKGLLEDELGFYKE 218

Query: 264 AEEYFNRSIRVDPENASLYVHRAMLMLQARGNVDEAIKLIEKAISIDKSCMFAYETLGTI 323
           A + FN++I+++P  A  Y +R +      G   EAI+  +KAI ++ +  + Y   G +
Sbjct: 219 AIKDFNKAIKLNPNYALAYNNRGIAK-DELGQYKEAIEDYDKAIELEPNTAYLYNDRGWV 277

Query: 324 EVQRGRLEEAVKCFNKALPLARD-EAELSHIYSLR 357
           +   G  +EA+K + KAL L  D E   S+I +L+
Sbjct: 278 KKNAGLYKEALKDYKKALELDPDNEYAKSNIANLK 312



 Score = 54.3 bits (129), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 42/173 (24%), Positives = 75/173 (43%), Gaps = 41/173 (23%)

Query: 156 AFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQRHFVV 215
           A  D D+A  +DPN+ D+Y  +G +    G Y+EA+++ +K I LNPN+ +A   R    
Sbjct: 185 AIKDFDKALSIDPNLFDAYNNKGLLEDELGFYKEAIKDFNKAIKLNPNYALAYNNRGIA- 243

Query: 216 HKMIVPGDRERVEQSLKEFRNFVDTHSNVVEACTLFAQVLVDQEDFDGAEEYFNRSIRVD 275
                       +  L +++  +                    ED+D       ++I ++
Sbjct: 244 ------------KDELGQYKEAI--------------------EDYD-------KAIELE 264

Query: 276 PENASLYVHRAMLMLQARGNVDEAIKLIEKAISIDKSCMFAYETLGTIEVQRG 328
           P  A LY  R  +   A G   EA+K  +KA+ +D    +A   +  ++ + G
Sbjct: 265 PNTAYLYNDRGWVKKNA-GLYKEALKDYKKALELDPDNEYAKSNIANLKKEHG 316



 Score = 48.9 bits (115), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 22/56 (39%), Positives = 35/56 (62%)

Query: 468 AFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQR 523
           A  D D+A  +DPN+ D+Y  +G +    G Y+EA+++ +K I LNPN+ +A   R
Sbjct: 185 AIKDFDKALSIDPNLFDAYNNKGLLEDELGFYKEAIKDFNKAIKLNPNYALAYNNR 240



 Score = 44.3 bits (103), Expect = 0.17,   Method: Compositional matrix adjust.
 Identities = 31/78 (39%), Positives = 39/78 (50%), Gaps = 8/78 (10%)

Query: 450 GNLENESG-QKHAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDK 508
           G LE+E G  K A  DF KA        K++PN A +Y  RG      GQY+EA+ + DK
Sbjct: 207 GLLEDELGFYKEAIKDFNKAI-------KLNPNYALAYNNRGIAKDELGQYKEAIEDYDK 259

Query: 509 TIALNPNFHVARAQRHFV 526
            I L PN       R +V
Sbjct: 260 AIELEPNTAYLYNDRGWV 277



 Score = 39.3 bits (90), Expect = 5.3,   Method: Compositional matrix adjust.
 Identities = 53/232 (22%), Positives = 101/232 (43%), Gaps = 35/232 (15%)

Query: 292 ARGNVDEAIKLIEKAISIDKSCMFAYETLGTIEVQRGRLEEAVKCFNKALPLARDEAELS 351
           A G   EAIK  ++AI ++ +   AY      + +   L+EA++ ++KA+ L    A+ +
Sbjct: 110 ANGEYAEAIKYYDEAIKLNPNMADAYYNKAIAKTKLVLLKEAIEEYDKAIEL---RADYT 166

Query: 352 HIYSLRDAAIAQMKVCERYNIKKKVSPRSQNITKNEKLAIKQLRENNDIIIRPADK-GGK 410
           + Y  R    + + + E                     AIK   +   I     D    K
Sbjct: 167 YAYYNRGLLKSDLGLLEE--------------------AIKDFDKALSIDPNLFDAYNNK 206

Query: 411 TVVMDKADYTQKMTSILNSNDYEIIPGDPTKTIEESEKYGNLENESGQKHAASDFTKAFA 470
            ++ D+  + ++     N    + I  +P   +  + + G  ++E GQ      + +A  
Sbjct: 207 GLLEDELGFYKEAIKDFN----KAIKLNPNYALAYNNR-GIAKDELGQ------YKEAIE 255

Query: 471 DLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQ 522
           D D+A +++PN A  Y  RG +    G Y+EAL++  K + L+P+   A++ 
Sbjct: 256 DYDKAIELEPNTAYLYNDRGWVKKNAGLYKEALKDYKKALELDPDNEYAKSN 307


>gi|218437459|ref|YP_002375788.1| hypothetical protein PCC7424_0454 [Cyanothece sp. PCC 7424]
 gi|218170187|gb|ACK68920.1| Tetratricopeptide TPR_2 repeat protein [Cyanothece sp. PCC 7424]
          Length = 357

 Score = 68.2 bits (165), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 62/248 (25%), Positives = 116/248 (46%), Gaps = 14/248 (5%)

Query: 153 FTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQRH 212
           + +A    ++A  ++PN   +Y +RG  Y    QY+EA  + ++ + L+  F  A   R 
Sbjct: 49  YQEALKQFNQALNINPNYTQAYTKRGLTYYHLKQYQEAFNDYNRAVQLDAKFPEAYTYRG 108

Query: 213 FVVHKMIVPGDRERVEQSLKEFRNFVDTHSNVVEACTLFAQVLVDQEDFDGAEEYFNRSI 272
            + H +   G+      +L ++   ++  SN  EA        +   D   A + + ++I
Sbjct: 109 LLRHAL---GND---IGALTDYNRAIEIKSNYAEAYNYRGVSHLALSDHQNAIKDYTQAI 162

Query: 273 RVDPENASLYVHRAMLMLQARGNVDEAIKLIEKAISIDKSCMFAYETLGTIEVQRGRLEE 332
            ++P+ A  Y +R +    A G+  +A++   KAI +D +   AY+  G  + Q G    
Sbjct: 163 ALNPKYAEAYNNRGVAHSIA-GDYAKAMEDYSKAIQLDSNYTQAYKNRGITKAQLGEYLA 221

Query: 333 AVKCFNKALPLARDEAELSHIYSLRDAAIAQMKVCER----YNIKKKVSPRSQNITKNEK 388
           A+  +N AL L   +++ S IY  R  A  Q+K  ++    Y+   K  P S N   +  
Sbjct: 222 AIIDYNHALEL---DSQDSSIYYNRGIAYYQLKEYQKAIADYSEVIKRDPNSPNTYFSRA 278

Query: 389 LAIKQLRE 396
           +A +QL++
Sbjct: 279 VARQQLKD 286



 Score = 52.0 bits (123), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 51/200 (25%), Positives = 91/200 (45%), Gaps = 30/200 (15%)

Query: 138 AHIKRAVVHLHAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKT 197
           A+  R V HL A SD   A  D  +A  ++P  A++Y  RG  + + G Y +A+ +  K 
Sbjct: 137 AYNYRGVSHL-ALSDHQNAIKDYTQAIALNPKYAEAYNNRGVAHSIAGDYAKAMEDYSKA 195

Query: 198 IALNPNF-------HVARAQRHFVVHKMI--------------VPGDRERVEQSLKEFRN 236
           I L+ N+        + +AQ    +  +I              +  +R      LKE++ 
Sbjct: 196 IQLDSNYTQAYKNRGITKAQLGEYLAAIIDYNHALELDSQDSSIYYNRGIAYYQLKEYQK 255

Query: 237 FVDTHSNVVE-----ACTLFAQVLVDQE--DFDGAEEYFNRSIRVDPENASLYVHRAMLM 289
            +  +S V++       T F++ +  Q+  D  GA + +N +I    + A  Y +R +L 
Sbjct: 256 AIADYSEVIKRDPNSPNTYFSRAVARQQLKDAQGALDDYNLAITKKTDYADAYFNRGLLF 315

Query: 290 LQARGNVDEAIKLIEKAISI 309
            Q  GN  + ++ +EKA S+
Sbjct: 316 YQV-GNQSKFVEDLEKAASL 334



 Score = 43.1 bits (100), Expect = 0.34,   Method: Compositional matrix adjust.
 Identities = 30/100 (30%), Positives = 46/100 (46%), Gaps = 2/100 (2%)

Query: 438 DPTKTIEESEKYGNLENESGQKHAA-SDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLF 496
           D  + IE    Y    N  G  H A SD   A  D  +A  ++P  A++Y  RG  + + 
Sbjct: 123 DYNRAIEIKSNYAEAYNYRGVSHLALSDHQNAIKDYTQAIALNPKYAEAYNNRGVAHSIA 182

Query: 497 GQYEEALRNLDKTIALNPNFHVARAQRHFVWTSTLAELMA 536
           G Y +A+ +  K I L+ N+  A   R  +  + L E +A
Sbjct: 183 GDYAKAMEDYSKAIQLDSNYTQAYKNRG-ITKAQLGEYLA 221



 Score = 39.7 bits (91), Expect = 4.7,   Method: Compositional matrix adjust.
 Identities = 54/262 (20%), Positives = 102/262 (38%), Gaps = 36/262 (13%)

Query: 255 LVDQEDFDGAEEYFNRSIRVDPENASLYVHRAMLMLQARGNVDEAIKLIEKAISIDKSCM 314
           L+ Q+ +  A + FN+++ ++P     Y  R +     +    EA     +A+ +D    
Sbjct: 43  LLKQKKYQEALKQFNQALNINPNYTQAYTKRGLTYYHLK-QYQEAFNDYNRAVQLDAKFP 101

Query: 315 FAYETLGTIEVQRGRLEEAVKCFNKALPLARDEAELSHIYSLRDAAIAQMKVCERYNIKK 374
            AY   G +    G    A+  +N+A+ +  + AE    Y+ R   ++ + + +  N   
Sbjct: 102 EAYTYRGLLRHALGNDIGALTDYNRAIEIKSNYAE---AYNYR--GVSHLALSDHQN--- 153

Query: 375 KVSPRSQNITKNEKLAIKQLRENNDIIIRPADKGGKTVVMDKADYTQKMTSILNSNDYEI 434
            +   +Q I  N K A  +   N  +    A            DY + M           
Sbjct: 154 AIKDYTQAIALNPKYA--EAYNNRGVAHSIA-----------GDYAKAME---------- 190

Query: 435 IPGDPTKTIEESEKYGN-LENESGQKHAASDFTKAFADLDEAEKVDPNVADSYYQRGQIY 493
              D +K I+    Y    +N    K    ++  A  D + A ++D   +  YY RG  Y
Sbjct: 191 ---DYSKAIQLDSNYTQAYKNRGITKAQLGEYLAAIIDYNHALELDSQDSSIYYNRGIAY 247

Query: 494 CLFGQYEEALRNLDKTIALNPN 515
               +Y++A+ +  + I  +PN
Sbjct: 248 YQLKEYQKAIADYSEVIKRDPN 269


>gi|374851919|dbj|BAL54865.1| tetratricopeptide repeat domain protein [uncultured Acidobacteria
            bacterium]
          Length = 1230

 Score = 68.2 bits (165), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 67/269 (24%), Positives = 116/269 (43%), Gaps = 17/269 (6%)

Query: 75   EDYLTAIRHCTEEIESTSSNHTKALARLLRATVYIFTSQSTKAIEDLTQLVEDTSV-DPK 133
            ED ++A R     IE +S    +AL  L     Y+     T+AIE   Q +E T   DP 
Sbjct: 854  EDAISAYRTA---IEQSSGRFPEALWNL--GNAYVRQGDITRAIEAYRQAIEQTGGRDPA 908

Query: 134  IKVNAHIKRAVVHLHAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRN 193
            +  N  +      L  A ++ +A A   +A ++ PN  +++Y  G +    G+ EEALR 
Sbjct: 909  LHHNLGLV-----LLQAGEWEQAEASFRKALELHPNDPEAHYYLGVLALGRGRLEEALRE 963

Query: 194  LDKTIALNPNFHVARAQRHFVVHKMIVPGDRERVEQSLKEFRNFVDTHSNVVEACTLFAQ 253
            L + +           + HF + K +   ++     + +EF+  ++   +  EA     +
Sbjct: 964  LRQALEQKSG---PFPEAHFDLGKALY--EKGEYAAAAREFQMALEQQGDFPEAHYWLGR 1018

Query: 254  VLVDQEDFDGAEEYFNRSIRVDPENASLYVHRAMLMLQARGNVDEAIKLIEKAISIDKSC 313
             L  Q D DGA           P++     +   L+   RG +D A+     AI+ ++  
Sbjct: 1019 ALAAQGDVDGAIAALQTVCATHPKSFPEAHYELGLLYSRRGMLDPALDQFSLAIAANRGV 1078

Query: 314  MF-AYETLGTIEVQRGRLEEAVKCFNKAL 341
               AY   G +  +RG +  A++ F KA+
Sbjct: 1079 FPEAYYQKGRVHARRGEVARAIEAFQKAI 1107



 Score = 64.3 bits (155), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 57/257 (22%), Positives = 115/257 (44%), Gaps = 40/257 (15%)

Query: 117 AIEDLTQLVEDTSVDPKIKVNAHIKRAVVHLHAASDFTKAFADLDEAEKVDPNVADSYYQ 176
           AI+ L Q +E     P+     H+ RA++HL    +  +A+    +A  + P+   +Y+ 
Sbjct: 616 AIQSLRQAIEQQPEFPE--AYDHLGRALLHLGRVEEAIEAY---RQALALRPDFVHAYHG 670

Query: 177 RGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQRHFVVHKMIVPGDRER---------- 226
            G    L G+ +EA+R L++ + L P+  + RA     V  ++  G+ ER          
Sbjct: 671 LGVALYLNGELDEAIRALERALELKPD--LPRAHHDLGV-ALLDRGEIERAIAAFQAAIQ 727

Query: 227 ----------------------VEQSLKEFRNFVDTHSNVVEACTLFAQVLVDQEDFDGA 264
                                 +EQ++  +R  ++   +  +A       L ++ +   A
Sbjct: 728 TAGRPYPEGYYDLGNAYFARGDLEQAIAAYRTAIEHKPDFGQAHYRLGLALWERGEVAEA 787

Query: 265 EEYFNRSIRVDPENASLYVHRAMLMLQARGNVDEAIKLIEKAISIDKSCMFAYETLGTIE 324
              F+R+I V+P+      +   +ML   G +D A++ + +AI+  +    AY +LG + 
Sbjct: 788 RAAFHRAIEVEPQAFPQAYYSLGVMLLEHGELDAALEALRQAIAQCELFPLAYYSLGNVF 847

Query: 325 VQRGRLEEAVKCFNKAL 341
           + +GR+E+A+  +  A+
Sbjct: 848 LAQGRIEDAISAYRTAI 864



 Score = 59.3 bits (142), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 45/171 (26%), Positives = 81/171 (47%), Gaps = 8/171 (4%)

Query: 178 GQIYCLFGQYEEALRNLDKTIALNPNFHVARAQRHFVVHKMIVPGDRERVEQSLKEFRNF 237
           G  + + G+ EEA+    + IA  P       + +  + + +     + + ++++ FR  
Sbjct: 533 GLAFLVQGKLEEAIEAYRRAIAACPT---PWPEAYLELGRALQQKGMDALPEAIEAFRQA 589

Query: 238 VDTHSNVVEACTLFAQVLVDQEDFDGAEEYFNRSIRVDPENASLYVH--RAMLMLQARGN 295
           V   S+  EA       L+D  +++GA +   ++I   PE    Y H  RA+L L   G 
Sbjct: 590 VRARSDFPEAHYHLGCALLDAGEWEGAIQSLRQAIEQQPEFPEAYDHLGRALLHL---GR 646

Query: 296 VDEAIKLIEKAISIDKSCMFAYETLGTIEVQRGRLEEAVKCFNKALPLARD 346
           V+EAI+   +A+++    + AY  LG      G L+EA++   +AL L  D
Sbjct: 647 VEEAIEAYRQALALRPDFVHAYHGLGVALYLNGELDEAIRALERALELKPD 697



 Score = 58.2 bits (139), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 60/256 (23%), Positives = 107/256 (41%), Gaps = 14/256 (5%)

Query: 88  IESTSSNHTKALARLLRATVYIFTSQSTKAIEDLTQ-LVEDTSVDPKIKVNAHIKRAVVH 146
           IE T  NH  A   L          +  +AIE   Q + +   V P+   + H+  A+ H
Sbjct: 102 IEQTGGNHPGAYHNL--GLALFGKGEVERAIEAFRQAIAQRGGVFPR--AHFHLGFALAH 157

Query: 147 LHAASDFTKAFADLDEA-EKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFH 205
                   +A A    A E+   +  D ++Q G +    G  EEA+      I      +
Sbjct: 158 ---TGRIEEAIAAYRTAIEQSGGHSPDIHFQLGWLLMGKGDLEEAIEAFRTAIEQRGGVY 214

Query: 206 VARAQRHFVVHKMIVPGDRERVEQSLKEFRNFVDTHSNVVEACTLFAQVLVDQEDFDGAE 265
               +  + + + ++   R R+E+++  FR  +  + N  EA     +  + Q D + A 
Sbjct: 215 ---PEAQYELGRALL--ARGRLEEAITTFRTLLQVNPNHPEAYFNLGRAYLRQGDLEAAR 269

Query: 266 EYFNRSIRVDPENASLYVHRAMLMLQARGNVDEAIKLIEKAISIDKSCMFAYETLGTIEV 325
           E    +IR    N +   H+  L+L  +G+V++A     +AI  +     AY  LG +  
Sbjct: 270 EALETAIRQRGGNFAAAHHQLGLLLAQQGDVEQAAAAYHRAIEQNPFFPRAYYDLGRLYA 329

Query: 326 QRGRLEEAVKCFNKAL 341
            +G  EEA+   ++A+
Sbjct: 330 TQGAYEEAIAALSRAV 345



 Score = 48.5 bits (114), Expect = 0.009,   Method: Compositional matrix adjust.
 Identities = 55/227 (24%), Positives = 104/227 (45%), Gaps = 12/227 (5%)

Query: 120 DLTQLVED--TSVDPKIKVNAHIKRAVVHLHAASDFTKAFADLDEAEKVDPNV-ADSYYQ 176
           DL Q +    T+++ K        R  + L    +  +A A    A +V+P     +YY 
Sbjct: 749 DLEQAIAAYRTAIEHKPDFGQAHYRLGLALWERGEVAEARAAFHRAIEVEPQAFPQAYYS 808

Query: 177 RGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQRHFVVHKMIVPGDRERVEQSLKEFRN 236
            G +    G+ + AL  L + IA    F +A    ++ +  + +   + R+E ++  +R 
Sbjct: 809 LGVMLLEHGELDAALEALRQAIAQCELFPLA----YYSLGNVFL--AQGRIEDAISAYRT 862

Query: 237 FVDTHSN-VVEACTLFAQVLVDQEDFDGAEEYFNRSI-RVDPENASLYVHRAMLMLQARG 294
            ++  S    EA        V Q D   A E + ++I +    + +L+ +  +++LQA G
Sbjct: 863 AIEQSSGRFPEALWNLGNAYVRQGDITRAIEAYRQAIEQTGGRDPALHHNLGLVLLQA-G 921

Query: 295 NVDEAIKLIEKAISIDKSCMFAYETLGTIEVQRGRLEEAVKCFNKAL 341
             ++A     KA+ +  +   A+  LG + + RGRLEEA++   +AL
Sbjct: 922 EWEQAEASFRKALELHPNDPEAHYYLGVLALGRGRLEEALRELRQAL 968



 Score = 45.1 bits (105), Expect = 0.11,   Method: Compositional matrix adjust.
 Identities = 84/406 (20%), Positives = 154/406 (37%), Gaps = 45/406 (11%)

Query: 151 SDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPN------F 204
            D  +A A    A + +P    +YY  G++Y   G YEEA+  L + +            
Sbjct: 298 GDVEQAAAAYHRAIEQNPFFPRAYYDLGRLYATQGAYEEAIAALSRAVEQRQGHFPEAEL 357

Query: 205 HVARAQ------RHFVVHKMIVPGDRERVEQSLKEFRNFVDTHSNVVEACTLFAQ----- 253
            +ARA          + H   V      V +S  E  +      ++  A   F Q     
Sbjct: 358 ELARALASAGRLEEAIAHLERVIAQGYEVAESWYELGHLFFLRKDLDRAAAAFRQALEAA 417

Query: 254 -------------VLVDQEDFDGAEEYFNRSIRVDPE--NASLYVHRAMLMLQARGNVDE 298
                        VL ++ +   A + F  +I   P   NA   + R +L L   G ++ 
Sbjct: 418 GGTFPRARYNLGRVLHEKGELQAAADAFRHAIAEHPHFPNAHFNLARTLLEL---GELEA 474

Query: 299 AIKLIEKAI-SIDKSCMFAYETLGTIEVQRGRLEEAVKCFNKALPLARDEAELSHIYSLR 357
           A + I+ AI   ++    AY  LG I   RG L EA+  +  A+   R E        L 
Sbjct: 475 ARQAIQTAIEQRERHFPEAYHLLGRIAYSRGDLAEAIDAYQTAIH-QRQEPYPEAWRDLG 533

Query: 358 DAAIAQMKVCERYNIKKKVSPRSQNITKNEKLAIKQLRENNDIIIRP-ADKGGKTVVMDK 416
            A + Q K+ E     ++             L + +  +   +   P A +  +  V  +
Sbjct: 534 LAFLVQGKLEEAIEAYRRAIAACPTPWPEAYLELGRALQQKGMDALPEAIEAFRQAVRAR 593

Query: 417 ADYTQKM----TSILNSNDYEIIPGDPTKTIEESEKYGNLENESGQK--HAASDFTKAFA 470
           +D+ +       ++L++ ++E       + IE+  ++    +  G+   H      +A  
Sbjct: 594 SDFPEAHYHLGCALLDAGEWEGAIQSLRQAIEQQPEFPEAYDHLGRALLHLGR-VEEAIE 652

Query: 471 DLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNF 516
              +A  + P+   +Y+  G    L G+ +EA+R L++ + L P+ 
Sbjct: 653 AYRQALALRPDFVHAYHGLGVALYLNGELDEAIRALERALELKPDL 698



 Score = 43.9 bits (102), Expect = 0.24,   Method: Compositional matrix adjust.
 Identities = 89/448 (19%), Positives = 173/448 (38%), Gaps = 113/448 (25%)

Query: 116 KAIEDLTQLVEDTSVDPKIKVNAHIKRAVVHLHAASDFTKAFADLDEAEKVDPNVADSYY 175
           +AIE   Q V   S  P+   + H+  A++    A ++  A   L +A +  P   ++Y 
Sbjct: 581 EAIEAFRQAVRARSDFPE--AHYHLGCALLD---AGEWEGAIQSLRQAIEQQPEFPEAYD 635

Query: 176 QRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQRHFVVHKMIVPGDRERVEQSLKEFR 235
             G+     G+ EEA+    + +AL P+F  A    H +   + + G+   ++++++   
Sbjct: 636 HLGRALLHLGRVEEAIEAYRQALALRPDFVHA---YHGLGVALYLNGE---LDEAIRALE 689

Query: 236 NFVDTHSNVVEACTLFAQVLVDQED-----------------------FDGAEEYFNR-- 270
             ++   ++  A       L+D+ +                       +D    YF R  
Sbjct: 690 RALELKPDLPRAHHDLGVALLDRGEIERAIAAFQAAIQTAGRPYPEGYYDLGNAYFARGD 749

Query: 271 ----------SIRVDPENASLYVHRAMLMLQARGNVDEAIKLIEKAISIDKSCMF-AYET 319
                     +I   P+    + +R  L L  RG V EA     +AI ++      AY +
Sbjct: 750 LEQAIAAYRTAIEHKPDFGQAH-YRLGLALWERGEVAEARAAFHRAIEVEPQAFPQAYYS 808

Query: 320 LGTIEVQRGRLEEAVKCFNKAL------PLARDEAELSHIYSLRDAAIAQMKVCERYNIK 373
           LG + ++ G L+ A++   +A+      PLA         YSL +  +AQ ++       
Sbjct: 809 LGVMLLEHGELDAALEALRQAIAQCELFPLA--------YYSLGNVFLAQGRI------- 853

Query: 374 KKVSPRSQNITKNEKLAIKQLRENNDIIIRPADKGGKTVVMDKADYTQKMTSILNSNDYE 433
                  ++     + AI+Q                         + + + ++ N+    
Sbjct: 854 -------EDAISAYRTAIEQ---------------------SSGRFPEALWNLGNAY--- 882

Query: 434 IIPGDPTKTIEESEKYGNLENESGQKHA-----------ASDFTKAFADLDEAEKVDPNV 482
           +  GD T+ IE   +   +E   G+  A           A ++ +A A   +A ++ PN 
Sbjct: 883 VRQGDITRAIEAYRQ--AIEQTGGRDPALHHNLGLVLLQAGEWEQAEASFRKALELHPND 940

Query: 483 ADSYYQRGQIYCLFGQYEEALRNLDKTI 510
            +++Y  G +    G+ EEALR L + +
Sbjct: 941 PEAHYYLGVLALGRGRLEEALRELRQAL 968



 Score = 38.9 bits (89), Expect = 7.7,   Method: Compositional matrix adjust.
 Identities = 30/120 (25%), Positives = 53/120 (44%), Gaps = 3/120 (2%)

Query: 224 RERVEQSLKEFRNFV-DTHSNVVEACTLFAQVLVDQEDFDGAEEYFNRSIRVDPENASLY 282
           R  +E ++   R  +        +A  L  + L D  D + A   F  +I   P+    +
Sbjct: 19  RGELEAAITALRTAIKQQQGRFPKAYFLLGRALYDAGDVERAIAAFRTAIEQQPQYPEAH 78

Query: 283 VHRAMLMLQARGNVDEAIKLIEKAI-SIDKSCMFAYETLGTIEVQRGRLEEAVKCFNKAL 341
            +  M + + RG ++EAI   E+AI     +   AY  LG     +G +E A++ F +A+
Sbjct: 79  YYLGMALAR-RGELEEAIAAYERAIEQTGGNHPGAYHNLGLALFGKGEVERAIEAFRQAI 137


>gi|297180994|gb|ADI17196.1| FOG: tpr repeat-protein [uncultured Rhodobacterales bacterium
           HF0070_10D05]
          Length = 734

 Score = 68.2 bits (165), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 56/209 (26%), Positives = 100/209 (47%), Gaps = 21/209 (10%)

Query: 147 LHAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHV 206
           L A  DF K+   L++A +++P+ A++   RG I         AL +L+    L P  H+
Sbjct: 240 LRANGDFGKSLRYLNKAIELNPDYAEALINRGLISLAQEDKASALTDLENAHKLKP--HI 297

Query: 207 ARAQRHFVVHKMIVPGDRERVEQSLKEFRNFVDTHSNVVEACT----LFAQVLVDQE--- 259
            +     +  KM             K+F + +     +V+       LFA + +  +   
Sbjct: 298 NQIWHPILTLKM-----------EAKDFEHTIALAEGMVKLDPMDEKLFASMALSHQHLK 346

Query: 260 DFDGAEEYFNRSIRVDPENASLYVHRAMLMLQARGNVDEAIKLIEKAISIDKSCMFAYET 319
           ++D A  ++N++I + P+ A+ Y +     L+ +G +DEAI+   KA+ I      AY  
Sbjct: 347 NYDDAVVFYNKAISIKPDYATAYNNMGN-ALKDQGKLDEAIEAFNKALCIKPDYATAYNN 405

Query: 320 LGTIEVQRGRLEEAVKCFNKALPLARDEA 348
           +G     +G+L+EA++ FNKAL +  D A
Sbjct: 406 MGNALKDQGKLDEAIEAFNKALCIKPDYA 434


>gi|334118912|ref|ZP_08493000.1| Tetratricopeptide TPR_1 repeat-containing protein [Microcoleus
           vaginatus FGP-2]
 gi|333459142|gb|EGK87757.1| Tetratricopeptide TPR_1 repeat-containing protein [Microcoleus
           vaginatus FGP-2]
          Length = 1004

 Score = 68.2 bits (165), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 60/269 (22%), Positives = 127/269 (47%), Gaps = 15/269 (5%)

Query: 75  EDYLTAIRHCTEEIESTSSNHTKALARLLRATVYIFTSQSTKAIEDLTQLVEDTSVDPKI 134
           E Y  A+  C ++     SN+ +A A   +  V     +  +A+  L + +E   +D   
Sbjct: 485 ERYYEAV-ECLDKAIKIDSNYVRAWAH--KGNVLDSLKRYDEALAFLDRAIE---LDDNN 538

Query: 135 KVNAHIKRAVVHLHAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNL 194
           K    ++  V  L+    + +A    D A ++DPN   ++ +RG +     +Y++AL + 
Sbjct: 539 KFYWFLRGNV--LNNLKRYDEALVSYDRALELDPNYQSAWAKRGDVLSNLKRYDKALESY 596

Query: 195 DKTIALNPNFHVARAQRHFVVHKMIVPGDRERVEQSLKEFRNFVDTHSNVVEACTLFAQV 254
           D+ I L+ N+  A A R  V++ +      +R +++L  +   ++  +N   A      V
Sbjct: 597 DRAIELDANYRWAWANRGGVLYNL------KRYDEALVSYDRAIELDANYRWAWANRGGV 650

Query: 255 LVDQEDFDGAEEYFNRSIRVDPENASLYVHRAMLMLQARGNVDEAIKLIEKAISIDKSCM 314
           L + + +D A   ++R+I +D      + +R  ++   +   DEA+   ++AI +D +  
Sbjct: 651 LYNLKRYDEALVSYDRAIELDANYRWAWANRGGVLYNLK-RYDEALVSYDRAIELDANNQ 709

Query: 315 FAYETLGTIEVQRGRLEEAVKCFNKALPL 343
            A+   G +  +  R +EA+  +++A+ L
Sbjct: 710 SAWANRGNVLYKLKRYDEALVSYDRAIEL 738



 Score = 49.3 bits (116), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 50/234 (21%), Positives = 106/234 (45%), Gaps = 15/234 (6%)

Query: 128 TSVDPKIKVNAHIKRAVVH----LHAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCL 183
            S D  I+++A+ + A  +    L+    + +A    D A ++D N   ++  RG +   
Sbjct: 662 VSYDRAIELDANYRWAWANRGGVLYNLKRYDEALVSYDRAIELDANNQSAWANRGNVLYK 721

Query: 184 FGQYEEALRNLDKTIALNPNFHVARAQRHFVVHKMIVPGDRERVEQSLKEFRNFVDTHSN 243
             +Y+EAL + D+ I L+ N   A A +  V++K+      +R +++L  +   ++  +N
Sbjct: 722 LKRYDEALVSYDRAIELDANNQSAWANQGNVLYKL------KRYDEALVSYDRAIELDAN 775

Query: 244 VVEACTLFAQVLVDQEDFDGAEEYFNRSIRVDPENASLYVHRAMLMLQARGNVDEAIKLI 303
                 L   +L   + ++ A   ++R+I +D     ++  R  L+L      +EA+   
Sbjct: 776 YQLVWFLRGLLLDTLKRYEEALVSYDRAIELDTNYQLVWFLRG-LLLDTLKRYEEALVSY 834

Query: 304 EKAISID--KSCMFAYETLGTIEVQRGRLEEAVKCFNKALPLARDEAELSHIYS 355
           ++AI +    S  F Y  +  + +   R +E +   + A      + E+S  Y+
Sbjct: 835 DRAIELGDLSSYFFFYRAIAILGL--NRWDEGLVALDHAFQRIESDDEVSSEYA 886



 Score = 40.4 bits (93), Expect = 2.3,   Method: Compositional matrix adjust.
 Identities = 19/62 (30%), Positives = 34/62 (54%)

Query: 465 FTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQRH 524
           + +A    D A ++DPN   ++ +RG +     +Y++AL + D+ I L+ N+  A A R 
Sbjct: 555 YDEALVSYDRALELDPNYQSAWAKRGDVLSNLKRYDKALESYDRAIELDANYRWAWANRG 614

Query: 525 FV 526
            V
Sbjct: 615 GV 616



 Score = 40.0 bits (92), Expect = 3.3,   Method: Compositional matrix adjust.
 Identities = 20/59 (33%), Positives = 35/59 (59%)

Query: 465 FTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQR 523
           + +A A LD A ++D N    ++ RG +     +Y+EAL + D+ + L+PN+  A A+R
Sbjct: 521 YDEALAFLDRAIELDDNNKFYWFLRGNVLNNLKRYDEALVSYDRALELDPNYQSAWAKR 579


>gi|145545470|ref|XP_001458419.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
 gi|124426239|emb|CAK91022.1| unnamed protein product [Paramecium tetraurelia]
          Length = 551

 Score = 68.2 bits (165), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 80/375 (21%), Positives = 155/375 (41%), Gaps = 46/375 (12%)

Query: 174 YYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQRHFVVHKMIVPGDRERVEQSLKE 233
           YY  G       +Y+EA+   DK I++NPN+  A   +   ++K+       + +++++ 
Sbjct: 26  YYYIGNALKSLNKYQEAIECYDKAISINPNYEAAWINKGLALNKL------NQYQEAIEC 79

Query: 234 FRNFVDTHSNVVEACTLFAQVLVDQEDFDGAEEYFNRSIRVDPE---------NASLYVH 284
           +   +  + N      L    L     +  A E +++SI ++P          N  L  H
Sbjct: 80  YNKAISINPNYDVTWYLKGHALSKLNQYQKAIECYDKSISINPNYDVTWFNKGNQLLEQH 139

Query: 285 RAMLMLQARGNVDEAIKLIEKAISIDKSCMFAYETLGTIEVQRGRLEEAVKCFNKALPLA 344
              + L       EAI+  +KAI I+ +    +   G    +  R +EA++C +KA+ + 
Sbjct: 140 YIGISLSKINKYYEAIECYDKAIFINPNYDLTWYLKGHALNKLNRYQEAIECSDKAISIN 199

Query: 345 --RDEAELSHIYSLRDAAIAQMKVCERYNIKKKVSPRSQNITKNEKLAIKQLRE------ 396
              D+A  +   +L+     Q  + E Y+   K++P +  +  N+ +A+  L +      
Sbjct: 200 PNYDDAWNNKGNALKSLNKYQEAI-ECYDKAIKINPNNFGVWNNKGIALDNLNQHQEAME 258

Query: 397 --NNDIIIRPA------DKGGKTVVMDKADYTQKMTSILNSNDYEIIPGDPTKTIEESEK 448
             N  I I P       +KG     + K  Y + +        Y+ I  +P   +  +  
Sbjct: 259 CYNKAISINPNYDVAWNNKGNALNHLHK--YQEAVECY-----YKAIFINPNYDVAWNNI 311

Query: 449 YGNLENESGQKHAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDK 508
              L   +  K A   + KA +       ++PN   +++  G       +Y+EA+   DK
Sbjct: 312 GDGLSKLNKYKDAIECYKKAIS-------INPNYDVTWFHNGLALSNLNKYQEAIECYDK 364

Query: 509 TIALNPNFHVARAQR 523
            I++NPN+  A   +
Sbjct: 365 AISINPNYEAAWINK 379



 Score = 58.2 bits (139), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 48/197 (24%), Positives = 94/197 (47%), Gaps = 7/197 (3%)

Query: 147 LHAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHV 206
           L + + + +A    D+A K++PN    +  +G       Q++EA+   +K I++NPN+ V
Sbjct: 213 LKSLNKYQEAIECYDKAIKINPNNFGVWNNKGIALDNLNQHQEAMECYNKAISINPNYDV 272

Query: 207 ARAQRHFVVHKMIVPGDRERVEQSLKEFRNFVDTHSNVVEACTLFAQVLVDQEDFDGAEE 266
           A   +   ++ +     +E VE   K    F++ + +V  A       L     +  A E
Sbjct: 273 AWNNKGNALNHL--HKYQEAVECYYKAI--FINPNYDV--AWNNIGDGLSKLNKYKDAIE 326

Query: 267 YFNRSIRVDPENASLYVHRAMLMLQARGNVDEAIKLIEKAISIDKSCMFAYETLGTIEVQ 326
            + ++I ++P     + H   L L       EAI+  +KAISI+ +   A+   G    +
Sbjct: 327 CYKKAISINPNYDVTWFHNG-LALSNLNKYQEAIECYDKAISINPNYEAAWINKGHALNK 385

Query: 327 RGRLEEAVKCFNKALPL 343
             + +EA++C++KA+ +
Sbjct: 386 LNQYQEAIECYDKAISI 402



 Score = 55.5 bits (132), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 88/434 (20%), Positives = 177/434 (40%), Gaps = 39/434 (8%)

Query: 112 SQSTKAIEDLTQLVEDTSVDPKIKVNAHIKRAVVHLHAASDFTKAFADLDEAEKVDPNVA 171
           +Q  +AIE   + +   S++P   V  ++K     L   + + KA    D++  ++PN  
Sbjct: 71  NQYQEAIECYNKAI---SINPNYDVTWYLKGHA--LSKLNQYQKAIECYDKSISINPNYD 125

Query: 172 DSYYQRG-----QIY-----CLFGQYEEALRNLDKTIALNPNFHVARAQRHFVVHKMIVP 221
            +++ +G     Q Y         +Y EA+   DK I +NPN+ +    +   ++K+   
Sbjct: 126 VTWFNKGNQLLEQHYIGISLSKINKYYEAIECYDKAIFINPNYDLTWYLKGHALNKL--- 182

Query: 222 GDRERVEQSLKEFRNFVDTHSNVVEACTLFAQVLVDQEDFDGAEEYFNRSIRVDPENASL 281
               R +++++     +  + N  +A       L     +  A E ++++I+++P N  +
Sbjct: 183 ---NRYQEAIECSDKAISINPNYDDAWNNKGNALKSLNKYQEAIECYDKAIKINPNNFGV 239

Query: 282 YVHRAMLMLQARGNVDEAIKLIEKAISIDKSCMFAYETLGTIEVQRGRLEEAVKCFNKAL 341
           + ++  + L       EA++   KAISI+ +   A+   G       + +EAV+C+ KA+
Sbjct: 240 WNNKG-IALDNLNQHQEAMECYNKAISINPNYDVAWNNKGNALNHLHKYQEAVECYYKAI 298

Query: 342 PLA--RDEAE------LSHIYSLRDAAIAQMKVCERYNIKKKVSPRSQNITKNEKLAIKQ 393
            +    D A       LS +   +DA        E Y     ++P       +  LA+  
Sbjct: 299 FINPNYDVAWNNIGDGLSKLNKYKDAI-------ECYKKAISINPNYDVTWFHNGLALSN 351

Query: 394 LRENNDIIIRPADKGGKTVVMDKADYTQKMTSILNSNDYEIIPGDPTKTIEESEKYGNLE 453
           L +  + I    DK        +A +  K  ++   N Y+       K I  +  Y    
Sbjct: 352 LNKYQEAI-ECYDKAISINPNYEAAWINKGHALNKLNQYQEAIECYDKAISINSNYEAAW 410

Query: 454 NESGQKHAA-SDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIAL 512
           N  G      + + +A    D+   ++ N   ++  +G       QY++A+   DK I++
Sbjct: 411 NNKGLALTKLNKYQEAIECYDKVISINQNSDAAWNNKGFALSNLYQYQDAIECYDKAISI 470

Query: 513 NPNFHVARAQRHFV 526
           N     A   +  +
Sbjct: 471 NSKHDTAWQNKGLI 484



 Score = 50.1 bits (118), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 60/306 (19%), Positives = 132/306 (43%), Gaps = 30/306 (9%)

Query: 58  ESHELDLLSKAKRAFEHEDYLTAIRHCTEEIESTSSNHTKALARLLRA------TVYI-- 109
           + H L+ L++ + A E  D   +I    ++  +   N  K+L +   A       + I  
Sbjct: 175 KGHALNKLNRYQEAIECSDKAISINPNYDDAWNNKGNALKSLNKYQEAIECYDKAIKINP 234

Query: 110 --FTSQSTK--AIEDLTQLVEDT-------SVDPKIKVNAHIK-RAVVHLHAASDFTKAF 157
             F   + K  A+++L Q  E         S++P   V  + K  A+ HLH   +  + +
Sbjct: 235 NNFGVWNNKGIALDNLNQHQEAMECYNKAISINPNYDVAWNNKGNALNHLHKYQEAVECY 294

Query: 158 ADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQRHFVVHK 217
               +A  ++PN   ++   G       +Y++A+    K I++NPN+ V         H 
Sbjct: 295 Y---KAIFINPNYDVAWNNIGDGLSKLNKYKDAIECYKKAISINPNYDVTW------FHN 345

Query: 218 MIVPGDRERVEQSLKEFRNFVDTHSNVVEACTLFAQVLVDQEDFDGAEEYFNRSIRVDPE 277
            +   +  + +++++ +   +  + N   A       L     +  A E ++++I ++  
Sbjct: 346 GLALSNLNKYQEAIECYDKAISINPNYEAAWINKGHALNKLNQYQEAIECYDKAISINSN 405

Query: 278 NASLYVHRAMLMLQARGNVDEAIKLIEKAISIDKSCMFAYETLGTIEVQRGRLEEAVKCF 337
             + + ++  L L       EAI+  +K ISI+++   A+   G       + ++A++C+
Sbjct: 406 YEAAWNNKG-LALTKLNKYQEAIECYDKVISINQNSDAAWNNKGFALSNLYQYQDAIECY 464

Query: 338 NKALPL 343
           +KA+ +
Sbjct: 465 DKAISI 470



 Score = 44.7 bits (104), Expect = 0.13,   Method: Compositional matrix adjust.
 Identities = 46/217 (21%), Positives = 96/217 (44%), Gaps = 45/217 (20%)

Query: 129 SVDPKIKVNA-HIKRAVVHLHAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQY 187
           S++P   V   H   A+ +L   + + +A    D+A  ++PN   ++  +G       QY
Sbjct: 333 SINPNYDVTWFHNGLALSNL---NKYQEAIECYDKAISINPNYEAAWINKGHALNKLNQY 389

Query: 188 EEALRNLDKTIALNPNFHVARAQRHFVVHKMIVPGDRERVEQSLKEFRNFVDTHSNVVEA 247
           +EA+   DK I++N N+  A   +   + K             L +++          EA
Sbjct: 390 QEAIECYDKAISINSNYEAAWNNKGLALTK-------------LNKYQ----------EA 426

Query: 248 CTLFAQVLVDQEDFDGAEEYFNRSIRVDPENASLYVHRAMLMLQARGNVDEAIKLIEKAI 307
              + +V+   ++ D A  + N+   +    ++LY ++            +AI+  +KAI
Sbjct: 427 IECYDKVISINQNSDAA--WNNKGFAL----SNLYQYQ------------DAIECYDKAI 468

Query: 308 SIDKSCMFAYETLGTIEVQRGRLEEAVKCFNKALPLA 344
           SI+     A++  G I     + ++A+ C+++AL ++
Sbjct: 469 SINSKHDTAWQNKGLILHNLNKYKDAIICYDQALSIS 505


>gi|307154454|ref|YP_003889838.1| hypothetical protein Cyan7822_4657 [Cyanothece sp. PCC 7822]
 gi|306984682|gb|ADN16563.1| Tetratricopeptide TPR_2 repeat protein [Cyanothece sp. PCC 7822]
          Length = 434

 Score = 68.2 bits (165), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 46/194 (23%), Positives = 90/194 (46%), Gaps = 7/194 (3%)

Query: 150 ASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARA 209
           A D+  A  +  +   ++P +++++  RG        Y  A+ + +K I+LNP       
Sbjct: 57  AKDYQGAIVEFSKVIAINPQISEAFNNRGLARSGLKDYRGAIEDYNKAISLNPKEARYYN 116

Query: 210 QRHFVVHKMIVPGDRERVEQSLKEFRNFVDTHSNVVEACTLFAQVLVDQEDFDGAEEYFN 269
            R   +H+    GD    + +L+++   +  +  + EA T    +  +  D+  A    N
Sbjct: 117 NRGLALHR---SGDS---KSALEDYNKAISLNPKLAEAYTNRGFIRDELRDYRRALADHN 170

Query: 270 RSIRVDPENASLYVHRAMLMLQARGNVDEAIKLIEKAISIDKSCMFAYETLGTIEVQRGR 329
           +++R+DP+NA+ Y +R  + L   GN  E ++  E+AI +D S   AY   G +    G 
Sbjct: 171 QALRLDPKNATAYNNRG-VTLSNLGNFQEGLEDFERAIRLDPSIAIAYNNRGIVRYLLGS 229

Query: 330 LEEAVKCFNKALPL 343
               ++  N++  L
Sbjct: 230 YSGVIEDLNRSTSL 243



 Score = 59.7 bits (143), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 81/358 (22%), Positives = 144/358 (40%), Gaps = 34/358 (9%)

Query: 134 IKVNAHIKRAVVHLHAA----SDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEE 189
           I +N  I  A  +   A     D+  A  D ++A  ++P  A  Y  RG      G  + 
Sbjct: 71  IAINPQISEAFNNRGLARSGLKDYRGAIEDYNKAISLNPKEARYYNNRGLALHRSGDSKS 130

Query: 190 ALRNLDKTIALNPNFHVARAQRHFVVHKMIVPGDRERVEQSLKEFRNFVDTHSNVVE--- 246
           AL + +K I+LNP    A   R F             +   L+++R  +  H+  +    
Sbjct: 131 ALEDYNKAISLNPKLAEAYTNRGF-------------IRDELRDYRRALADHNQALRLDP 177

Query: 247 ----ACTLFAQVLVDQEDFDGAEEYFNRSIRVDPENASLYVHRAMLMLQARGNVDEAIKL 302
               A       L +  +F    E F R+IR+DP  A  Y +R ++     G+    I+ 
Sbjct: 178 KNATAYNNRGVTLSNLGNFQEGLEDFERAIRLDPSIAIAYNNRGIVRY-LLGSYSGVIED 236

Query: 303 IEKAISIDKSCMFAYETLGTIEVQRGRLEEAVKCFNKALPLARDEAELSHIYSLRDAAIA 362
           + ++ S+D S +  Y    T+  + GR +EA+  +++ +   R + + +H Y  R    A
Sbjct: 237 LNRSTSLDPSEIKPYGNRATVFDESGRYQEAIDNYSQVI---RRQPKEAHAYYGRGINYA 293

Query: 363 QM----KVCERYNIKKKVSPRSQNITKNEKLAIKQLRENNDIIIRPADKGGKTVVMDKAD 418
           ++    +  + Y     ++PR   IT  + L  +   +N + I++P ++  +   +    
Sbjct: 294 EIGSFQQAIDDYIQATNLNPRLL-ITNFDVLLGRNPLKNAEAILQPFNQAIQENPVSSVA 352

Query: 419 YTQKMTSILNSNDYEIIPGDPTKTIEESEKYGNLENESG-QKHAASDFTKAFADLDEA 475
           Y  +        DY     D T  I     Y    N  G  ++   D   A ADL +A
Sbjct: 353 YHNRGNIRYQLKDYRGAIEDYTLAIRFDNNYALAYNNRGVARYQVGDKQGAKADLQQA 410



 Score = 53.1 bits (126), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 53/233 (22%), Positives = 93/233 (39%), Gaps = 46/233 (19%)

Query: 111 TSQSTKAIEDLTQLVEDTSVDPKIKVNAHIKRAVVHLHAASDFTKAFADLDEAEKVDPNV 170
           +  S  A+ED  + +   S++PK+   A+  R  +      D+ +A AD ++A ++DP  
Sbjct: 125 SGDSKSALEDYNKAI---SLNPKL-AEAYTNRGFIR-DELRDYRRALADHNQALRLDPKN 179

Query: 171 ADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQRHFVVHKMIVPGDRERVEQS 230
           A +Y  RG      G ++E L + ++ I L+P+  +A   R  V                
Sbjct: 180 ATAYNNRGVTLSNLGNFQEGLEDFERAIRLDPSIAIAYNNRGIV---------------- 223

Query: 231 LKEFRNFVDTHSNVVEACTLFAQVLVDQEDFDGAEEYFNRSIRVDPENASLYVHRAMLML 290
               R  + ++S V+E                      NRS  +DP     Y +RA +  
Sbjct: 224 ----RYLLGSYSGVIED--------------------LNRSTSLDPSEIKPYGNRATVFD 259

Query: 291 QARGNVDEAIKLIEKAISIDKSCMFAYETLGTIEVQRGRLEEAVKCFNKALPL 343
           ++ G   EAI    + I        AY   G    + G  ++A+  + +A  L
Sbjct: 260 ES-GRYQEAIDNYSQVIRRQPKEAHAYYGRGINYAEIGSFQQAIDDYIQATNL 311



 Score = 48.9 bits (115), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 67/294 (22%), Positives = 125/294 (42%), Gaps = 40/294 (13%)

Query: 228 EQSLKEFRNFVDTHSNVVEACTLFAQVLVDQEDFDGAEEYFNRSIRVDPENASLYVHRAM 287
           + ++ EF   +  +  + EA           +D+ GA E +N++I ++P+ A  Y +R  
Sbjct: 61  QGAIVEFSKVIAINPQISEAFNNRGLARSGLKDYRGAIEDYNKAISLNPKEARYYNNRG- 119

Query: 288 LMLQARGNVDEAIKLIEKAISIDKSCMFAYETLGTIEVQRGRLEEAVKCFNKALPLARDE 347
           L L   G+   A++   KAIS++     AY   G I  +      A+   N+AL L   +
Sbjct: 120 LALHRSGDSKSALEDYNKAISLNPKLAEAYTNRGFIRDELRDYRRALADHNQALRL---D 176

Query: 348 AELSHIYSLRDAAIAQMKVCERYNIKKKVSPRSQNITKNEKLAIKQLRENNDIIIRPADK 407
            + +  Y+ R   ++ +      N ++ +    + I  +  +AI     NN  I+R    
Sbjct: 177 PKNATAYNNRGVTLSNLG-----NFQEGLEDFERAIRLDPSIAIAY---NNRGIVRYLLG 228

Query: 408 GGKTVVMDKADYTQKMTSILNSNDYEIIPGDPTKTIEESEKYGN---LENESGQKHAASD 464
               V+ D      + TS+           DP+    E + YGN   + +ESG+      
Sbjct: 229 SYSGVIED----LNRSTSL-----------DPS----EIKPYGNRATVFDESGR------ 263

Query: 465 FTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHV 518
           + +A  +  +  +  P  A +YY RG  Y   G +++A+ +  +   LNP   +
Sbjct: 264 YQEAIDNYSQVIRRQPKEAHAYYGRGINYAEIGSFQQAIDDYIQATNLNPRLLI 317



 Score = 43.9 bits (102), Expect = 0.21,   Method: Compositional matrix adjust.
 Identities = 20/63 (31%), Positives = 35/63 (55%)

Query: 464 DFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQR 523
           D+ +A AD ++A ++DP  A +Y  RG      G ++E L + ++ I L+P+  +A   R
Sbjct: 161 DYRRALADHNQALRLDPKNATAYNNRGVTLSNLGNFQEGLEDFERAIRLDPSIAIAYNNR 220

Query: 524 HFV 526
             V
Sbjct: 221 GIV 223


>gi|374576416|ref|ZP_09649512.1| putative O-linked N-acetylglucosamine transferase, SPINDLY family
           [Bradyrhizobium sp. WSM471]
 gi|374424737|gb|EHR04270.1| putative O-linked N-acetylglucosamine transferase, SPINDLY family
           [Bradyrhizobium sp. WSM471]
          Length = 708

 Score = 68.2 bits (165), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 64/250 (25%), Positives = 114/250 (45%), Gaps = 25/250 (10%)

Query: 124 LVEDTSVDPKIKVNAHIKRAVV------HLHAASDFTKAFADLDEAEKVDPNVADSYYQR 177
           L    +VDP+    AH    V       H  A   + KA A       + PN A +    
Sbjct: 80  LSRAVAVDPR-SAEAHTSLGVALNGLKRHNEARESYRKALA-------LRPNYALALSNL 131

Query: 178 GQIYCLFGQYEEALRNLDKTIALNPNFHVARAQRHFVVHKMIVPGDRERVEQSLKEFRNF 237
           G        Y+EAL + DK +A++     A   R + + ++         ++++      
Sbjct: 132 GNASAALELYQEALESYDKALAIDGKLSEAHNGRGWALCRV------RAYDEAIASLNRA 185

Query: 238 VDTHSNVVEACTLFAQVLVDQEDFDGAEEYFNRSIRVDPENASLYVHRAMLMLQARGNVD 297
           +    +   A +  A  L + + FD A    NR+I + P++A+ ++ RA ++L  R  V 
Sbjct: 186 LSIKPDYASALSTRAVALRELQRFDEAMADCNRAIALAPDDANGWLRRASILLLTR-QVA 244

Query: 298 EAIKLIEKAISIDKSCMFAYETLGTIEVQRGRLEEAVKCFNKALPLARDEAELSH-IYSL 356
           EA+   EKA++ D     A+  LG      GR++EA+  F++A+ +  D++ +S  I++L
Sbjct: 245 EALSDCEKALATDPGFSQAHSLLGQCLAALGRVDEALASFDRAIDIEPDQSTISSKIFTL 304

Query: 357 ---RDAAIAQ 363
               DA++AQ
Sbjct: 305 DFIADASVAQ 314


>gi|443661142|ref|ZP_21132694.1| tetratricopeptide repeat family protein [Microcystis aeruginosa
           DIANCHI905]
 gi|159027046|emb|CAO89232.1| unnamed protein product [Microcystis aeruginosa PCC 7806]
 gi|443332373|gb|ELS46985.1| tetratricopeptide repeat family protein [Microcystis aeruginosa
           DIANCHI905]
          Length = 970

 Score = 68.2 bits (165), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 47/214 (21%), Positives = 96/214 (44%), Gaps = 10/214 (4%)

Query: 151 SDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQ 210
            DF  A A  D+A ++ P++  ++Y RG      G++E+A+ + D+ +   P+FH A   
Sbjct: 190 GDFIGAIASYDQALEIKPDLHQAWYNRGIALRNLGRFEQAIASYDRALEFKPDFHEAWTN 249

Query: 211 RHFVVHKMIVPGDRERVEQSLKEFRNFVDTHSNVVEACTLFAQVLVDQEDFDGAEEYFNR 270
           R   +  +       R E+++  +   ++   +  EA       L +   F  A   +++
Sbjct: 250 RGLALKNL------GRYEEAIASYDRALEIKPDCHEAWYNRGIALHNLGRFAEAIASYDQ 303

Query: 271 SIRVDPENASLYVHRAMLMLQARGNVDEAIKLIEKAISIDKSCMFAYETLGTIEVQRGRL 330
           ++ + P+    + +R  + L   G  ++AI   ++A+ I      A+   G      GR 
Sbjct: 304 ALEIKPDYHEAWYNRG-IALHNLGRFEQAIASWDRALEIKPDYHEAWNNRGIALGNLGRF 362

Query: 331 EEAVKCFNKALPLARDEAELSHIYSLRDAAIAQM 364
           E+A+  F++AL    D   L   ++ R  A+  +
Sbjct: 363 EQAIASFDRALEFKPD---LHEAWNNRGTAVCSL 393



 Score = 50.8 bits (120), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 26/104 (25%), Positives = 53/104 (50%), Gaps = 6/104 (5%)

Query: 145 VHLHAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNF 204
           + LH    F +A A  D+A ++ P+  +++Y RG      G++E+A+ + D+ + + P++
Sbjct: 286 IALHNLGRFAEAIASYDQALEIKPDYHEAWYNRGIALHNLGRFEQAIASWDRALEIKPDY 345

Query: 205 HVARAQRHFVVHKMIVPGDRERVEQSLKEFRNFVDTHSNVVEAC 248
           H A   R   +      G+  R EQ++  F   ++   ++ EA 
Sbjct: 346 HEAWNNRGIAL------GNLGRFEQAIASFDRALEFKPDLHEAW 383



 Score = 46.6 bits (109), Expect = 0.034,   Method: Compositional matrix adjust.
 Identities = 21/66 (31%), Positives = 36/66 (54%)

Query: 458 QKHAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFH 517
           QK    DF  A A  D+A ++ P++  ++Y RG      G++E+A+ + D+ +   P+FH
Sbjct: 185 QKVINGDFIGAIASYDQALEIKPDLHQAWYNRGIALRNLGRFEQAIASYDRALEFKPDFH 244

Query: 518 VARAQR 523
            A   R
Sbjct: 245 EAWTNR 250



 Score = 43.5 bits (101), Expect = 0.26,   Method: Compositional matrix adjust.
 Identities = 18/64 (28%), Positives = 36/64 (56%)

Query: 460 HAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVA 519
           H    F +A A  D+A ++ P+  +++Y RG      G++E+A+ + D+ + + P++H A
Sbjct: 289 HNLGRFAEAIASYDQALEIKPDYHEAWYNRGIALHNLGRFEQAIASWDRALEIKPDYHEA 348

Query: 520 RAQR 523
              R
Sbjct: 349 WNNR 352


>gi|421597100|ref|ZP_16040780.1| hypothetical protein BCCGELA001_07294 [Bradyrhizobium sp.
           CCGE-LA001]
 gi|404270790|gb|EJZ34790.1| hypothetical protein BCCGELA001_07294 [Bradyrhizobium sp.
           CCGE-LA001]
          Length = 452

 Score = 67.8 bits (164), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 66/282 (23%), Positives = 123/282 (43%), Gaps = 22/282 (7%)

Query: 268 FNRSIRVDPENASLYVHRAMLMLQARGNVDEAIKLIEKAISIDKSCMFAYETLGTIEVQR 327
            +R+I +D  NA  +  R  L+ +A G+++ A   + KAI +D     AYE  G +   +
Sbjct: 86  LDRAIALDGRNAKAWRVRGDLLREAGGDLNRAAADLTKAIELDPKDAEAYELRGVVYTNQ 145

Query: 328 GRLEEAVKCFNKALPLARDEAELSHIYSLRDAAIA------QMKVCERYNIKKKVSPRSQ 381
            RL+ A+  +++A+ L  D+A+     +  D  +A        K  + ++   ++ P   
Sbjct: 146 RRLDRALADYDQAIKLKPDDAQ-----AWSDRGVAYYLGGDNEKAVKNFDEALRLDPNRA 200

Query: 382 NITKNEKLAIKQLRENNDIIIRPADKGGKTVVMDKAD---YTQKMTSILNSNDYEIIPGD 438
               N   A K+L + N  +   AD  G+ + +D      Y  +  +     +Y+    D
Sbjct: 201 RTYTNRGAAYKKLGQLNKAV---ADD-GEAIRLDPRVPEYYDNRGLTYAAMGEYDKAIAD 256

Query: 439 PTKTIEESEKYGNLENESGQKHAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQ 498
             + I   ++   L N         +   A +D + A K+DPN A +Y  R  +Y   G+
Sbjct: 257 YDQAIRREQRANFLTNRGDSYQFKGELGAALSDYEAALKLDPNFAKTYNNRAVLYKKMGE 316

Query: 499 YEEALRNLDKTIALNPNFHVARAQRHFVWTSTLAELMAFSDE 540
            ++AL + +  + L+P    A   R  +    +AE+  F  E
Sbjct: 317 RKKALADYETALKLDPGNENATNGRRVM----IAEIAKFGAE 354



 Score = 62.0 bits (149), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 82/326 (25%), Positives = 148/326 (45%), Gaps = 33/326 (10%)

Query: 81  IRHCTEEIESTSSNHT-KALARLLRATVYIFTSQS-TKAIEDLTQLVEDTSVDPKIKVNA 138
           I  C+  I+ T+++ + ++LA + RA      S   ++A+ DL + +   ++D +    A
Sbjct: 44  ISACSAIIDQTANSASERSLALVARAEANARISGGLSQALRDLDRAI---ALDGR-NAKA 99

Query: 139 HIKRAVVHLHAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTI 198
              R  +   A  D  +A ADL +A ++DP  A++Y  RG +Y    + + AL + D+ I
Sbjct: 100 WRVRGDLLREAGGDLNRAAADLTKAIELDPKDAEAYELRGVVYTNQRRLDRALADYDQAI 159

Query: 199 ALNPNFHVARAQRHFVVHKMIVPGDRERV----EQSLKEFRNFVDTHSNVVEACTLFAQV 254
            L P+   A + R    +   + GD E+     +++L+   N   T++N   A     Q+
Sbjct: 160 KLKPDDAQAWSDRGVAYY---LGGDNEKAVKNFDEALRLDPNRARTYTNRGAAYKKLGQL 216

Query: 255 LVDQEDFDGAEEYFNRSIRVDPENASLYVHRAMLMLQARGNVDEAIKLIEKAISIDKSCM 314
                D DG       +IR+DP     Y +R  L   A G  D+AI   ++AI  ++   
Sbjct: 217 NKAVAD-DG------EAIRLDPRVPEYYDNRG-LTYAAMGEYDKAIADYDQAIRREQRAN 268

Query: 315 FAYETLGTIEVQRGRLEEAVKCFNKALPLARDEAELSHIYSLRDAAIAQMKVCER----- 369
           F      + +  +G L  A+  +  AL L   +   +  Y+ R  A+   K+ ER     
Sbjct: 269 FLTNRGDSYQF-KGELGAALSDYEAALKL---DPNFAKTYNNR--AVLYKKMGERKKALA 322

Query: 370 -YNIKKKVSPRSQNITKNEKLAIKQL 394
            Y    K+ P ++N T   ++ I ++
Sbjct: 323 DYETALKLDPGNENATNGRRVMIAEI 348


>gi|356960782|ref|ZP_09063764.1| TPR repeat-containing protein, partial [gamma proteobacterium SCGC
           AAA001-B15]
          Length = 243

 Score = 67.8 bits (164), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 53/209 (25%), Positives = 97/209 (46%), Gaps = 9/209 (4%)

Query: 142 RAVVHLHAASDFTKAFADLDEAEKVD-PNVADSYYQRGQIYCLFGQYEEALRNLDKTIAL 200
            +V+ L++     +A  D  EA  +D PN    Y   G  Y   GQ + A++  +K +A+
Sbjct: 12  NSVIGLYSNGQIQEAL-DSVEALTIDYPNEPLLYNVSGACYAGLGQLDAAVKRYEKALAI 70

Query: 201 NPNFHVARAQRHFVVHKMIVPGDRERVEQSLKEFRNFVDTHSNVVEACTLFAQVLVDQED 260
            P++             +       +++ ++K +   V    N  EA      VL +   
Sbjct: 71  KPDYAEVHNNLGVAFQGL------GQLDAAVKSYEQAVAITPNYAEAHNNLGNVLRELNQ 124

Query: 261 FDGAEEYFNRSIRVDPENASLYVHRAMLMLQARGNVDEAIKLIEKAISIDKSCMFAYETL 320
            D A + + ++I + P+ A  + +  ++  Q +G +D A+K  EKA++I      AY  L
Sbjct: 125 LDTALKSYEQAISIKPDYADAHYNLGIVH-QEQGQIDNAVKQYEKAVAIKPDYAQAYNNL 183

Query: 321 GTIEVQRGRLEEAVKCFNKALPLARDEAE 349
           G    +RG+++ AVK + KA+ +  D AE
Sbjct: 184 GVSFQERGQIDNAVKQYEKAVAINPDYAE 212



 Score = 63.5 bits (153), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 43/186 (23%), Positives = 91/186 (48%), Gaps = 7/186 (3%)

Query: 161 DEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQRHFVVHKMIV 220
           ++A  + P+ A+ +   G  +   GQ + A+++ ++ +A+ PN+  A      V+ ++  
Sbjct: 65  EKALAIKPDYAEVHNNLGVAFQGLGQLDAAVKSYEQAVAITPNYAEAHNNLGNVLREL-- 122

Query: 221 PGDRERVEQSLKEFRNFVDTHSNVVEACTLFAQVLVDQEDFDGAEEYFNRSIRVDPENAS 280
                +++ +LK +   +    +  +A      V  +Q   D A + + +++ + P+ A 
Sbjct: 123 ----NQLDTALKSYEQAISIKPDYADAHYNLGIVHQEQGQIDNAVKQYEKAVAIKPDYAQ 178

Query: 281 LYVHRAMLMLQARGNVDEAIKLIEKAISIDKSCMFAYETLGTIEVQRGRLEEAVKCFNKA 340
            Y +   +  Q RG +D A+K  EKA++I+     A+  L     + G+L+ AVK + KA
Sbjct: 179 AY-NNLGVSFQERGQIDNAVKQYEKAVAINPDYAEAHYNLAGTLKELGQLDAAVKSYEKA 237

Query: 341 LPLARD 346
           L +  D
Sbjct: 238 LAIKPD 243



 Score = 45.8 bits (107), Expect = 0.065,   Method: Compositional matrix adjust.
 Identities = 56/253 (22%), Positives = 104/253 (41%), Gaps = 43/253 (16%)

Query: 285 RAMLMLQARGNVDEAIKLIEKAISID-KSCMFAYETLGTIEVQRGRLEEAVKCFNKALPL 343
            +++ L + G + EA+  +E A++ID  +    Y   G      G+L+ AVK + KAL +
Sbjct: 12  NSVIGLYSNGQIQEALDSVE-ALTIDYPNEPLLYNVSGACYAGLGQLDAAVKRYEKALAI 70

Query: 344 ARDEAELSHIYSLRDAAIAQM-KVCERYNIKKKVSPRSQNITKNEKLAIKQLRENNDIII 402
             D AE+ +   +    + Q+    + Y     ++P       N    +++L +     +
Sbjct: 71  KPDYAEVHNNLGVAFQGLGQLDAAVKSYEQAVAITPNYAEAHNNLGNVLRELNQ-----L 125

Query: 403 RPADKGGKTVVMDKADYTQKMTSILNSNDYEIIPGDPTKTIEESEKYGNLENESGQ-KHA 461
             A K  +  +  K DY     ++                       G +  E GQ  +A
Sbjct: 126 DTALKSYEQAISIKPDYADAHYNL-----------------------GIVHQEQGQIDNA 162

Query: 462 ASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARA 521
              + KA A       + P+ A +Y   G  +   GQ + A++  +K +A+NP++    A
Sbjct: 163 VKQYEKAVA-------IKPDYAQAYNNLGVSFQERGQIDNAVKQYEKAVAINPDY----A 211

Query: 522 QRHFVWTSTLAEL 534
           + H+    TL EL
Sbjct: 212 EAHYNLAGTLKEL 224


>gi|428211029|ref|YP_007084173.1| hypothetical protein Oscil6304_0507 [Oscillatoria acuminata PCC
           6304]
 gi|427999410|gb|AFY80253.1| tetratricopeptide repeat protein [Oscillatoria acuminata PCC 6304]
          Length = 247

 Score = 67.8 bits (164), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 49/183 (26%), Positives = 85/183 (46%), Gaps = 7/183 (3%)

Query: 171 ADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQRHFVVHKMIVPGDRERVEQS 230
           A+ YY  G      G  E A+ +  + I LNPNF  A+      ++  +   +  R+ ++
Sbjct: 57  AERYYTEGARLQDEGNLEGAITSYQQAIRLNPNFTEAQ------INMGVALVNLGRISEA 110

Query: 231 LKEFRNFVDTHSNVVEACTLFAQVLVDQEDFDGAEEYFNRSIRVDPENASLYVHRAMLML 290
           +  +RN + T+S +  A    A  L  Q++FD A   +  +IR+ P     Y +   +++
Sbjct: 111 IAAYRNAIATNSQLAAAHYNLANALAQQQEFDEAIAAYEEAIRLQPNYDKAYYNMGNILV 170

Query: 291 QARGNVDEAIKLIEKAISIDKSCMFAYETLGTIEVQRGRLEEAVKCFNKALPLARDEAEL 350
             RG + +AI   +KAI I+ +   AY  LG I  + G   EA +    A  L + +   
Sbjct: 171 -TRGELQDAISAYQKAIEINPNFAEAYGNLGMILSEGGNQTEATQVLQTARDLFQRQGNF 229

Query: 351 SHI 353
           S +
Sbjct: 230 SAV 232



 Score = 44.7 bits (104), Expect = 0.14,   Method: Compositional matrix adjust.
 Identities = 30/114 (26%), Positives = 51/114 (44%), Gaps = 7/114 (6%)

Query: 134 IKVNAHIKRAVVHLHAA----SDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEE 189
           I  N+ +  A  +L  A     +F +A A  +EA ++ PN   +YY  G I    G+ ++
Sbjct: 118 IATNSQLAAAHYNLANALAQQQEFDEAIAAYEEAIRLQPNYDKAYYNMGNILVTRGELQD 177

Query: 190 ALRNLDKTIALNPNFHVARAQRHFVVHKMIVPGDRERVEQSLKEFRNFVDTHSN 243
           A+    K I +NPNF  A      ++ +    G++    Q L+  R+      N
Sbjct: 178 AISAYQKAIEINPNFAEAYGNLGMILSE---GGNQTEATQVLQTARDLFQRQGN 228



 Score = 43.1 bits (100), Expect = 0.41,   Method: Compositional matrix adjust.
 Identities = 23/66 (34%), Positives = 35/66 (53%), Gaps = 3/66 (4%)

Query: 451 NLENESGQKHAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTI 510
           NL N   Q+    +F +A A  +EA ++ PN   +YY  G I    G+ ++A+    K I
Sbjct: 130 NLANALAQQQ---EFDEAIAAYEEAIRLQPNYDKAYYNMGNILVTRGELQDAISAYQKAI 186

Query: 511 ALNPNF 516
            +NPNF
Sbjct: 187 EINPNF 192


>gi|182677316|ref|YP_001831462.1| hypothetical protein Bind_0319 [Beijerinckia indica subsp. indica
           ATCC 9039]
 gi|182633199|gb|ACB93973.1| TPR repeat-containing protein [Beijerinckia indica subsp. indica
           ATCC 9039]
          Length = 301

 Score = 67.8 bits (164), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 49/185 (26%), Positives = 85/185 (45%), Gaps = 7/185 (3%)

Query: 157 FADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQRHFVVH 216
            A L +    +P  +++Y  RG  Y   G+Y EA+ +  + I L+PN   A   R     
Sbjct: 71  LASLSDVVSRNPRSSEAYDTRGVAYAKLGKYSEAISDFSQAIKLDPNNAPAYTNRALAYR 130

Query: 217 KMIVPGDRERVEQSLKEFRNFVDTHSNVVEACTLFAQVLVDQEDFDGAEEYFNRSIRVDP 276
           +        R + +L +F   ++ +     A    A +L  Q + D A+   +++I+++P
Sbjct: 131 QS------NRNDAALADFNRAIEVNPRHAPAYLGRANLLRVQGNLDEAKSDLDQAIKLNP 184

Query: 277 ENASLYVHRAMLMLQARGNVDEAIKLIEKAISIDKSCMFAYETLGTIEVQRGRLEEAVKC 336
           ENA  + H   L+ Q  GN  +AI   + AI  D      Y   G   +  G+ ++A++ 
Sbjct: 185 ENAQAF-HARGLIYQREGNQPQAITDFDNAIDRDPFAGAPYLARGQSLIATGKYDKAIED 243

Query: 337 FNKAL 341
           FN AL
Sbjct: 244 FNAAL 248



 Score = 49.3 bits (116), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 66/277 (23%), Positives = 114/277 (41%), Gaps = 62/277 (22%)

Query: 63  DLLSKAKRAFEHED-----------YLTAIRHCTEEIESTSSNHTKALARLLRATVYIFT 111
           D++S+  R+ E  D           Y  AI   ++ I+   +N   A A   RA  Y  +
Sbjct: 76  DVVSRNPRSSEAYDTRGVAYAKLGKYSEAISDFSQAIKLDPNN---APAYTNRALAYRQS 132

Query: 112 SQSTKAIEDLTQLVEDTSVDPKIKVNAHIKRAVVHLHAASDFTKAFADLDEAEKVDPNVA 171
           +++  A+ D  + +E   V+P+    A++ RA + L    +  +A +DLD+A K++P  A
Sbjct: 133 NRNDAALADFNRAIE---VNPR-HAPAYLGRANL-LRVQGNLDEAKSDLDQAIKLNPENA 187

Query: 172 DSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQRHFVVHKMIVPGDRERVEQSL 231
            +++ RG IY   G   +A+ + D  I  +P          F     +  G         
Sbjct: 188 QAFHARGLIYQREGNQPQAITDFDNAIDRDP----------FAGAPYLARG--------- 228

Query: 232 KEFRNFVDTHSNVVEACTLFAQVLVDQEDFDGAEEYFNRSIRVDPENASLYVHRAMLMLQ 291
                                Q L+    +D A E FN ++ VD +N   +     L  +
Sbjct: 229 ---------------------QSLIATGKYDKAIEDFNAALHVDNKNPDAWAGLG-LAYE 266

Query: 292 ARGNVDEAIKLIEKAISIDKSCMFAYETLGTIEVQRG 328
             GN  +A +  ++A++ D S   A E  G+  V RG
Sbjct: 267 KSGNRTKAAESYQRALTFDPSNGLAKE--GSSRVGRG 301


>gi|384208546|ref|YP_005594266.1| hypothetical protein Bint_1063 [Brachyspira intermedia PWS/A]
 gi|343386196|gb|AEM21686.1| TPR domain-containing protein [Brachyspira intermedia PWS/A]
          Length = 424

 Score = 67.8 bits (164), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 86/377 (22%), Positives = 162/377 (42%), Gaps = 51/377 (13%)

Query: 153 FTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQRH 212
           +  A  D D+  ++ P  + +Y  RG      G YEEA++++DK I L+ N   A   R 
Sbjct: 84  YEAAVKDYDKVIELVPTHSKAYDDRGYAKGNLGYYEEAIKDIDKAIVLDSNNIDAYIDRA 143

Query: 213 FVVHKMIVPGDRERVEQSLKEFRNFVDTHSNVVEACTLFAQVLVDQEDFDGAEEYFNRSI 272
           F+  K++     ++  +++++++  ++     V A             ++ A  Y+N+ I
Sbjct: 144 FI--KLM----SKKYIEAIEDYKKVLELDDTEVYAYNGIGDAKRSIGLYEEAITYYNKVI 197

Query: 273 RVDPENASL-YVHRAMLMLQARGNVDEAIKLIEKAISIDKSCMFAYETLGTIEVQRGRLE 331
            +   N+S  Y +R    +   G  +EAI  I KA+ I      AY   GT E      +
Sbjct: 198 ELSNGNSSYAYNNRGACKI-GLGLYNEAIIDINKALEIYDEYTDAYNNRGTAEYNLELYK 256

Query: 332 EAVKCFNKALPLARDEAELSHIYSLRDAAIAQMKV----CERYNIKKKVSPRSQNITKNE 387
           EA+K F+KA+ L+    +  + Y+ R  A + + +     E +N    + P+  +   N 
Sbjct: 257 EAIKDFDKAIELS---PQYFYAYNNRGNAKSALGLYEDAIEDFNKAISIEPQYIDAYYNR 313

Query: 388 KLAIKQLRENNDIIIRPADKGGKTVVMDKADYTQKMTSILNSNDYEIIPGDPTKTIEESE 447
            +A   +  +N+ +                             DY+++       IE   
Sbjct: 314 AIAKNNMGLHNEAV----------------------------KDYDMV-------IELDN 338

Query: 448 KYGNLENESG-QKHAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNL 506
            + N     G   +  +D+ +A  + D   +++  +AD+Y  RG      G YEEA+R+ 
Sbjct: 339 NHINAYYNRGLSYYNLADYEEAIKNYDRVIELNSKLADAYNNRGFAKYSMGLYEEAVRDY 398

Query: 507 DKTIALNPNFHVARAQR 523
           DK I ++PN+  A+  +
Sbjct: 399 DKAIEIDPNYEKAKQNK 415



 Score = 60.8 bits (146), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 88/391 (22%), Positives = 156/391 (39%), Gaps = 55/391 (14%)

Query: 145 VHLHAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNF 204
           + L   + F KA     +A K D N ++ Y   G      G +EEA+   +K I ++ N+
Sbjct: 8   LQLFRETQFEKASELFLKALKEDANNSEIYNYLGIAKQALGLFEEAINYYNKGIEVDENY 67

Query: 205 HVARAQRHFVVHKMIVPGDRERVEQSLKEFRNFVDTHSNVVEACTLFAQVLVDQEDFDGA 264
               A+ ++         +R   E +L  +   V  +  V+E     ++   D+    G 
Sbjct: 68  ----AELYY---------NRANCESNLGLYEAAVKDYDKVIELVPTHSKAYDDRGYAKGN 114

Query: 265 EEYFNRSIR-------VDPENASLYVHRAMLMLQARGNVDEAIKLIEKAISIDKSCMFAY 317
             Y+  +I+       +D  N   Y+ RA + L ++  + EAI+  +K + +D + ++AY
Sbjct: 115 LGYYEEAIKDIDKAIVLDSNNIDAYIDRAFIKLMSKKYI-EAIEDYKKVLELDDTEVYAY 173

Query: 318 ETLGTIEVQRGRLEEAVKCFNKALPLARDEAELSHIYSLRDAAIAQMKVCERYNIKKKVS 377
             +G  +   G  EEA+  +NK + L+   +  S+ Y+ R A    + +           
Sbjct: 174 NGIGDAKRSIGLYEEAITYYNKVIELSNGNS--SYAYNNRGACKIGLGLYNE-------- 223

Query: 378 PRSQNITKNEKLAIKQLRENNDIIIRPADKGGKTVVMDKADYTQKMTSILNSNDYEIIPG 437
                       AI  + +  +I     D            Y  + T+  N   Y+    
Sbjct: 224 ------------AIIDINKALEIYDEYTDA-----------YNNRGTAEYNLELYKEAIK 260

Query: 438 DPTKTIEESEKYGNLENESGQ-KHAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLF 496
           D  K IE S +Y    N  G  K A   +  A  D ++A  ++P   D+YY R       
Sbjct: 261 DFDKAIELSPQYFYAYNNRGNAKSALGLYEDAIEDFNKAISIEPQYIDAYYNRAIAKNNM 320

Query: 497 GQYEEALRNLDKTIALNPNFHVARAQRHFVW 527
           G + EA+++ D  I L+ N   A   R   +
Sbjct: 321 GLHNEAVKDYDMVIELDNNHINAYYNRGLSY 351



 Score = 51.6 bits (122), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 90/343 (26%), Positives = 133/343 (38%), Gaps = 79/343 (23%)

Query: 261 FDGAEEYFNRSIRVDPENASLYVHRAM----LMLQ------------------------- 291
           F+ A  Y+N+ I VD   A LY +RA     L L                          
Sbjct: 50  FEEAINYYNKGIEVDENYAELYYNRANCESNLGLYEAAVKDYDKVIELVPTHSKAYDDRG 109

Query: 292 -ARGNV---DEAIKLIEKAISIDKSCMFAYETLGTIEVQRGRLEEAVKCFNKALPLARDE 347
            A+GN+   +EAIK I+KAI +D + + AY     I++   +  EA++ + K L L  D+
Sbjct: 110 YAKGNLGYYEEAIKDIDKAIVLDSNNIDAYIDRAFIKLMSKKYIEAIEDYKKVLEL--DD 167

Query: 348 AELSHIYSLRDA--AIAQMK-VCERYNIKKKVSPRSQNITKNEKLAIK-QLRENNDIIIR 403
            E+     + DA  +I   +     YN   ++S  + +   N + A K  L   N+ II 
Sbjct: 168 TEVYAYNGIGDAKRSIGLYEEAITYYNKVIELSNGNSSYAYNNRGACKIGLGLYNEAII- 226

Query: 404 PADKGGKTVVMDKAD--YTQKMTSILNSNDYEIIPGDPTKTIEESEKYGNLENESGQKHA 461
             D      + D+    Y  + T+  N   Y+    D  K IE S +Y    N  G   +
Sbjct: 227 --DINKALEIYDEYTDAYNNRGTAEYNLELYKEAIKDFDKAIELSPQYFYAYNNRGNAKS 284

Query: 462 A--------SDFTKAFA---------------------------DLDEAEKVDPNVADSY 486
           A         DF KA +                           D D   ++D N  ++Y
Sbjct: 285 ALGLYEDAIEDFNKAISIEPQYIDAYYNRAIAKNNMGLHNEAVKDYDMVIELDNNHINAY 344

Query: 487 YQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQRHFVWTS 529
           Y RG  Y     YEEA++N D+ I LN     A   R F   S
Sbjct: 345 YNRGLSYYNLADYEEAIKNYDRVIELNSKLADAYNNRGFAKYS 387



 Score = 50.1 bits (118), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 34/106 (32%), Positives = 53/106 (50%), Gaps = 13/106 (12%)

Query: 117 AIEDLTQLVEDTSVDPKIKVNAHIKRAV----VHLHAASDFTKAFADLDEAEKVDPNVAD 172
           AIED  + +   S++P+  ++A+  RA+    + LH      +A  D D   ++D N  +
Sbjct: 292 AIEDFNKAI---SIEPQY-IDAYYNRAIAKNNMGLH-----NEAVKDYDMVIELDNNHIN 342

Query: 173 SYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQRHFVVHKM 218
           +YY RG  Y     YEEA++N D+ I LN     A   R F  + M
Sbjct: 343 AYYNRGLSYYNLADYEEAIKNYDRVIELNSKLADAYNNRGFAKYSM 388



 Score = 48.9 bits (115), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 25/83 (30%), Positives = 47/83 (56%), Gaps = 1/83 (1%)

Query: 136 VNAHIKRAVVHLHAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLD 195
           +NA+  R + + + A D+ +A  + D   +++  +AD+Y  RG      G YEEA+R+ D
Sbjct: 341 INAYYNRGLSYYNLA-DYEEAIKNYDRVIELNSKLADAYNNRGFAKYSMGLYEEAVRDYD 399

Query: 196 KTIALNPNFHVARAQRHFVVHKM 218
           K I ++PN+  A+  +   + K+
Sbjct: 400 KAIEIDPNYEKAKQNKEEALKKL 422



 Score = 47.8 bits (112), Expect = 0.016,   Method: Compositional matrix adjust.
 Identities = 58/258 (22%), Positives = 112/258 (43%), Gaps = 20/258 (7%)

Query: 55  DTNESHELDLLSKAKRAFEHEDYLTAIRHCTEEIESTSSNHTKALARLLRATVYIFTSQS 114
           D  E +  + +  AKR+     Y  AI +  + IE ++ N + A     R    I     
Sbjct: 166 DDTEVYAYNGIGDAKRSIGL--YEEAITYYNKVIELSNGNSSYAYNN--RGACKIGLGLY 221

Query: 115 TKAIEDLTQLVE--DTSVDPKIKVNAHIKRAVVHLHAASDFTKAFADLDEAEKVDPNVAD 172
            +AI D+ + +E  D   D      A+  R     +    + +A  D D+A ++ P    
Sbjct: 222 NEAIIDINKALEIYDEYTD------AYNNRGTAEYNLEL-YKEAIKDFDKAIELSPQYFY 274

Query: 173 SYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQRHFVVHKMIVPGDRERVEQSLK 232
           +Y  RG      G YE+A+ + +K I++ P +  A   R    + M +        +++K
Sbjct: 275 AYNNRGNAKSALGLYEDAIEDFNKAISIEPQYIDAYYNRAIAKNNMGLHN------EAVK 328

Query: 233 EFRNFVDTHSNVVEACTLFAQVLVDQEDFDGAEEYFNRSIRVDPENASLYVHRAMLMLQA 292
           ++   ++  +N + A         +  D++ A + ++R I ++ + A  Y +R      +
Sbjct: 329 DYDMVIELDNNHINAYYNRGLSYYNLADYEEAIKNYDRVIELNSKLADAYNNRGFAKY-S 387

Query: 293 RGNVDEAIKLIEKAISID 310
            G  +EA++  +KAI ID
Sbjct: 388 MGLYEEAVRDYDKAIEID 405


>gi|428320334|ref|YP_007118216.1| Tetratricopeptide TPR_2 repeat-containing protein [Oscillatoria
           nigro-viridis PCC 7112]
 gi|428244014|gb|AFZ09800.1| Tetratricopeptide TPR_2 repeat-containing protein [Oscillatoria
           nigro-viridis PCC 7112]
          Length = 560

 Score = 67.8 bits (164), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 80/396 (20%), Positives = 162/396 (40%), Gaps = 59/396 (14%)

Query: 138 AHIKRAVVHLHAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKT 197
           A + R +  L  A  + +A    D A ++ P  + +++ RG       +Y EA+   D+ 
Sbjct: 201 AWLNRGLA-LMKAERYAEAVTSYDRAIQLQPQNSLAWFNRGIASAKLHKYAEAVTAYDRV 259

Query: 198 IALNPN-----FHVARAQRHFVVHKMIVPGDRERVEQSLKEFRNFVDTHSNVVEACTLFA 252
           + + PN     F+   A +H      I   DR             +  +S   EA     
Sbjct: 260 LQMQPNDCEAWFYKGMALKHQWADAAIACFDRA------------IQINSFYPEAWIGRG 307

Query: 253 QVLVDQEDFDGAEEYFNRSIRVDPENASLYVHRAMLMLQARGNVDEAIKLIEKAISIDKS 312
           Q L +  DF+GA   F+++I+++P     ++ R  + L       EAI     A+ I+ +
Sbjct: 308 QTLSESRDFEGAIAAFDQAIQINPNFPEAWLGRG-IALAGLERYKEAIIAYSNALQIEGN 366

Query: 313 CMFAYETLGTIEVQRGRLEEAVKCFNKALPLARDEAELSHIYSL-RDAAIAQMKVCER-- 369
            + A+   G    +  + EEA+ CF+K + L   EAE++    L + AA+ +++  E+  
Sbjct: 367 FLEAWNLRGEALEKLQQYEEAIACFDKVISLT-SEAEITSKVGLQQGAALEKLQQYEQAV 425

Query: 370 --YNIKKKVSPRSQNITKNEKLAIKQLRENNDIIIRPADKGGKTVVMDKADYTQKMTSIL 427
             YN   K+ P +         A+ +L++    +               A Y + +T   
Sbjct: 426 AAYNRVIKIVPDNFEAWLKRGNALSKLQQYEQAL---------------ASYDRAIT--- 467

Query: 428 NSNDYEIIPGDPTKTIEESEKYGNLENESGQKHAASDFTKAFADLDEAEKVDPNVADSYY 487
                 I P +    ++     G ++N          +++A    D   ++ P+  +++ 
Sbjct: 468 ------IWPDNYQGWVQRGLILGEMQN----------YSQALVAFDRVIQLKPDNWEAWA 511

Query: 488 QRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQR 523
           QRG +     + ++A+ +    + + P+++ A   R
Sbjct: 512 QRGDVLQKLQRTQDAISSYGVALEIKPDYYEALVSR 547



 Score = 55.1 bits (131), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 74/382 (19%), Positives = 154/382 (40%), Gaps = 37/382 (9%)

Query: 146 HLHAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFH 205
            L+A+  +  A     +A ++ P+ A ++   G+ Y     Y E +   D+  A+NP  +
Sbjct: 38  RLYASGRYEAAVLCYGKAVQIKPDWARAWLNLGKAYKQLHSYAETVACADRATAINPEEY 97

Query: 206 VARAQRHFVVHKMIVPGDRERVEQSLKEFRNFVDTHSNVVEACTLFAQVLVDQEDFDGAE 265
            A   R   +  +      +   +++  F   +  +S   EA     +VL + + +D A 
Sbjct: 98  WAWMLRGTGLLSL------QNHSEAIAAFDTAIQINSEKHEAWYQRGRVLEELQQWDAAA 151

Query: 266 EYFNRSIRVDPENASLYVHRAMLMLQARGNVDEAIKLIEKAISIDKSCMFAYETLGTIEV 325
             + R+ ++ P   +++  +  ++LQA     EA+   E+A+ +  +   A+   G   +
Sbjct: 152 TCYKRATQLHPNLPAMWYRQGNVLLQAE-RYPEAVAAFERALKLVPTNWEAWLNRGLALM 210

Query: 326 QRGRLEEAVKCFNKALPLARDEAELSHIYSLRDAAIAQM----KVCERYNIKKKVSPRSQ 381
           +  R  EAV  +++A+ L   + + S  +  R  A A++    +    Y+   ++ P   
Sbjct: 211 KAERYAEAVTSYDRAIQL---QPQNSLAWFNRGIASAKLHKYAEAVTAYDRVLQMQPNDC 267

Query: 382 NITKNEKLAIKQLRENNDIIIRPADKGGKTVVMDKADYTQKMTSILNSNDYE-------- 433
                + +A+K   +  D  I   D+  +        +  +  ++  S D+E        
Sbjct: 268 EAWFYKGMALKH--QWADAAIACFDRAIQINSFYPEAWIGRGQTLSESRDFEGAIAAFDQ 325

Query: 434 ---IIPGDPTKTIEESEKYGNLENESGQKHAASDFTKAFADLDEAEKVDPNVADSYYQRG 490
              I P  P   +        LE           + +A      A +++ N  +++  RG
Sbjct: 326 AIQINPNFPEAWLGRGIALAGLER----------YKEAIIAYSNALQIEGNFLEAWNLRG 375

Query: 491 QIYCLFGQYEEALRNLDKTIAL 512
           +      QYEEA+   DK I+L
Sbjct: 376 EALEKLQQYEEAIACFDKVISL 397



 Score = 48.9 bits (115), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 50/257 (19%), Positives = 104/257 (40%), Gaps = 48/257 (18%)

Query: 131 DPKIKVNAHIKRAVVH----LHAASDFTKAFADLDEAEKVDPNVADSYYQRG-------- 178
           D  I++N+    A +     L  + DF  A A  D+A +++PN  +++  RG        
Sbjct: 290 DRAIQINSFYPEAWIGRGQTLSESRDFEGAIAAFDQAIQINPNFPEAWLGRGIALAGLER 349

Query: 179 -------------------QIYCLFG-------QYEEALRNLDKTIALNPNFHVARA--- 209
                              + + L G       QYEEA+   DK I+L     +      
Sbjct: 350 YKEAIIAYSNALQIEGNFLEAWNLRGEALEKLQQYEEAIACFDKVISLTSEAEITSKVGL 409

Query: 210 QRHFVVHKMIVPGDRERVEQSLKEFRNFVDTHSNVVEACTLFAQVLVDQEDFDGAEEYFN 269
           Q+   + K+      ++ EQ++  +   +    +  EA       L   + ++ A   ++
Sbjct: 410 QQGAALEKL------QQYEQAVAAYNRVIKIVPDNFEAWLKRGNALSKLQQYEQALASYD 463

Query: 270 RSIRVDPENASLYVHRAMLMLQARGNVDEAIKLIEKAISIDKSCMFAYETLGTIEVQRGR 329
           R+I + P+N   +V R +++ + + N  +A+   ++ I +      A+   G +  +  R
Sbjct: 464 RAITIWPDNYQGWVQRGLILGEMQ-NYSQALVAFDRVIQLKPDNWEAWAQRGDVLQKLQR 522

Query: 330 LEEAVKCFNKALPLARD 346
            ++A+  +  AL +  D
Sbjct: 523 TQDAISSYGVALEIKPD 539



 Score = 39.7 bits (91), Expect = 4.6,   Method: Compositional matrix adjust.
 Identities = 30/139 (21%), Positives = 59/139 (42%), Gaps = 6/139 (4%)

Query: 153 FTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQRH 212
           + +A A  +   K+ P+  +++ +RG       QYE+AL + D+ I + P+ +    QR 
Sbjct: 421 YEQAVAAYNRVIKIVPDNFEAWLKRGNALSKLQQYEQALASYDRAITIWPDNYQGWVQRG 480

Query: 213 FVVHKMIVPGDRERVEQSLKEFRNFVDTHSNVVEACTLFAQVLVDQEDFDGAEEYFNRSI 272
            ++      G+ +   Q+L  F   +    +  EA      VL   +    A   +  ++
Sbjct: 481 LIL------GEMQNYSQALVAFDRVIQLKPDNWEAWAQRGDVLQKLQRTQDAISSYGVAL 534

Query: 273 RVDPENASLYVHRAMLMLQ 291
            + P+     V R  L L+
Sbjct: 535 EIKPDYYEALVSREELRLK 553


>gi|254415937|ref|ZP_05029694.1| tetratricopeptide repeat domain protein [Coleofasciculus
           chthonoplastes PCC 7420]
 gi|196177364|gb|EDX72371.1| tetratricopeptide repeat domain protein [Coleofasciculus
           chthonoplastes PCC 7420]
          Length = 268

 Score = 67.8 bits (164), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 53/206 (25%), Positives = 95/206 (46%), Gaps = 14/206 (6%)

Query: 151 SDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQ 210
            D+  A +D  +A K++P  AD+YY RG  Y   G Y+ A+ +  + I LNP+F  A + 
Sbjct: 57  GDYAGAISDFGDALKLEPEDADTYYNRGYAYHSLGNYDAAIYDYTQAIKLNPDFSQAYSN 116

Query: 211 RHFVVHKMIVPGDRERVEQSLKEFRNFVDTHSNVVEACTLFAQVLVDQEDFDGAEEYFN- 269
           R +          R   ++++ +F   ++      E  T +       ++   +EE  N 
Sbjct: 117 RGYTYFV------RRDYQKAIADFTKAIEIDP---ENDTAYISRGNAYDELGNSEEALND 167

Query: 270 --RSIRVDPENASLYVHRAMLMLQARGNVDEAIKLIEKAISIDKSCMFAYETLGTIEVQR 327
             +++ ++PENA LY +R +   +     ++AI    K+I +  +   AY   G  + Q 
Sbjct: 168 YAKALEINPENARLYYNRGLTRNRLE-QYEDAIADYTKSIELQPTFAEAYYNRGLTQFQL 226

Query: 328 GRLEEAVKCFNKALPLARDEAEL-SH 352
             +E A     KA  L +++  L SH
Sbjct: 227 ENIEAATADLQKAAELFKEQGRLDSH 252



 Score = 54.3 bits (129), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 26/76 (34%), Positives = 41/76 (53%)

Query: 452 LENESGQKHAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIA 511
           L N+   K    D+  A +D  +A K++P  AD+YY RG  Y   G Y+ A+ +  + I 
Sbjct: 46  LYNQGVDKLEKGDYAGAISDFGDALKLEPEDADTYYNRGYAYHSLGNYDAAIYDYTQAIK 105

Query: 512 LNPNFHVARAQRHFVW 527
           LNP+F  A + R + +
Sbjct: 106 LNPDFSQAYSNRGYTY 121



 Score = 40.0 bits (92), Expect = 3.3,   Method: Compositional matrix adjust.
 Identities = 20/51 (39%), Positives = 28/51 (54%)

Query: 464 DFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNP 514
           D+ KA AD  +A ++DP    +Y  RG  Y   G  EEAL +  K + +NP
Sbjct: 126 DYQKAIADFTKAIEIDPENDTAYISRGNAYDELGNSEEALNDYAKALEINP 176


>gi|23006671|ref|ZP_00048884.1| COG0457: FOG: TPR repeat [Magnetospirillum magnetotacticum MS-1]
          Length = 259

 Score = 67.8 bits (164), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 57/223 (25%), Positives = 98/223 (43%), Gaps = 8/223 (3%)

Query: 157 FADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQRHFVVH 216
            A L +    +P+ A +Y  RG  Y   GQ+ EA+ +  K I L+P    A   R     
Sbjct: 27  IASLSDVISRNPSDAGAYNTRGAAYARAGQFGEAISDFSKAIQLDPGSASAYNNRALAYR 86

Query: 217 KMIVPGDRERVEQSLKEFRNFVDTHSNVVEACTLFAQVLVDQEDFDGAEEYFNRSIRVDP 276
           +        R + ++++F   + +  N   A    A +   Q D DGA    N +IR+ P
Sbjct: 87  QT------GRNDAAMQDFSKAISSDPNFSAAYIGRANLERAQGDLDGALNDLNVAIRLAP 140

Query: 277 ENASLYVHRAMLMLQARGNVDEAIKLIEKAISIDKSCMFAYETLGTIEVQRGRLEEAVKC 336
           E+A  Y H   L+ Q +G+  EA+     AI  +      Y   G   +  G+ ++A++ 
Sbjct: 141 ESAEAY-HARGLVRQKQGHNAEAVGDFAAAIDRNPFVAAPYAARGQSLISMGQYDKAIED 199

Query: 337 FNKALPL-ARDEAELSHIYSLRDAAIAQMKVCERYNIKKKVSP 378
           FN AL + A+D +  ++     + A  + +  E Y    ++ P
Sbjct: 200 FNAALNVNAKDASSWAYRGLAYEKANRRKEASESYQQAARLDP 242



 Score = 40.4 bits (93), Expect = 2.6,   Method: Compositional matrix adjust.
 Identities = 22/67 (32%), Positives = 36/67 (53%), Gaps = 1/67 (1%)

Query: 454 NESGQKHA-ASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIAL 512
           N  G  +A A  F +A +D  +A ++DP  A +Y  R   Y   G+ + A+++  K I+ 
Sbjct: 45  NTRGAAYARAGQFGEAISDFSKAIQLDPGSASAYNNRALAYRQTGRNDAAMQDFSKAISS 104

Query: 513 NPNFHVA 519
           +PNF  A
Sbjct: 105 DPNFSAA 111


>gi|434395410|ref|YP_007130357.1| Tetratricopeptide TPR_1 repeat-containing protein [Gloeocapsa sp.
           PCC 7428]
 gi|428267251|gb|AFZ33197.1| Tetratricopeptide TPR_1 repeat-containing protein [Gloeocapsa sp.
           PCC 7428]
          Length = 1022

 Score = 67.8 bits (164), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 47/194 (24%), Positives = 90/194 (46%), Gaps = 41/194 (21%)

Query: 153 FTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQRH 212
           +  AFA   +  +V P  +D+++ RG +     +Y++A+ + DK I +NPN H+A   R 
Sbjct: 810 YEGAFAAFSQVIQVQPENSDAWFNRGIVLSRMKRYKDAIASYDKAIEINPNHHLAWVDRG 869

Query: 213 FVVHKMIVPGDRERVEQSLKEFRNFVDTHSNVVEACTLFAQVLVDQEDFDGAEEYFNRSI 272
             + K+                                        ++ + A + F+R++
Sbjct: 870 VALGKL----------------------------------------QNHEEAFQSFDRAV 889

Query: 273 RVDPENASLYVHRAMLMLQARGNVDEAIKLIEKAISIDKSCMFAYETLGTIEVQRGRLEE 332
           +V P++A  +++RAM  L+    +++AI   +KAI +D     A+   G + VQ  R  E
Sbjct: 890 QVKPDDAVAWMNRAM-ALEVLEKLEDAIASYDKAIELDPDYYKAWNAKGYLLVQLERDPE 948

Query: 333 AVKCFNKALPLARD 346
           A++ F++AL +  D
Sbjct: 949 ALESFDRALQIQPD 962



 Score = 44.7 bits (104), Expect = 0.12,   Method: Compositional matrix adjust.
 Identities = 19/59 (32%), Positives = 34/59 (57%)

Query: 465 FTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQR 523
           +  AFA   +  +V P  +D+++ RG +     +Y++A+ + DK I +NPN H+A   R
Sbjct: 810 YEGAFAAFSQVIQVQPENSDAWFNRGIVLSRMKRYKDAIASYDKAIEINPNHHLAWVDR 868



 Score = 42.0 bits (97), Expect = 0.81,   Method: Compositional matrix adjust.
 Identities = 58/300 (19%), Positives = 118/300 (39%), Gaps = 50/300 (16%)

Query: 226 RVEQSLKEFRNFVDTHSNVVEACTLFAQVLVDQEDFDGAEEYFNRSIRVDPENASLYVHR 285
           R ++++  +   ++   N  + C      L + + ++ A   F++ + + P++A+ + HR
Sbjct: 741 RYQEAIATYEQALEIQPNNPDLCYQQGLALWELKQYESAIAAFDKVLEIKPDDAASWYHR 800

Query: 286 AMLMLQARGNVDEAIKLIEKAISIDKSCMFAYETLGTIEVQRGRLEEAVKCFNKALPLAR 345
             L L+     + A     + I +      A+   G +  +  R ++A+  ++KA+    
Sbjct: 801 G-LALKELKRYEGAFAAFSQVIQVQPENSDAWFNRGIVLSRMKRYKDAIASYDKAI---- 855

Query: 346 DEAELSHIYSLRDAAIAQMKV------CERYNIKKKVSPRSQNITKNEKLAIKQLRENND 399
            E   +H  +  D  +A  K+       + ++   +V P       N  +A++ L +  D
Sbjct: 856 -EINPNHHLAWVDRGVALGKLQNHEEAFQSFDRAVQVKPDDAVAWMNRAMALEVLEKLED 914

Query: 400 IIIRPADKGGKTVVMDKADYTQKMTSILNSNDYEIIP--GDPTKTIEESEKYGNLENESG 457
            I        K + +D  DY +      N+  Y ++    DP                  
Sbjct: 915 AIA----SYDKAIELD-PDYYKAW----NAKGYLLVQLERDP------------------ 947

Query: 458 QKHAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFH 517
                    +A    D A ++ P+  ++YY +   Y   GQ + AL NL K I LNP + 
Sbjct: 948 ---------EALESFDRALQIQPDYPNAYYNKAICYAFQGQVKLALENLQKAIELNPKYR 998



 Score = 40.4 bits (93), Expect = 2.2,   Method: Compositional matrix adjust.
 Identities = 18/51 (35%), Positives = 27/51 (52%)

Query: 155 KAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFH 205
           +A    D A ++ P+  ++YY +   Y   GQ + AL NL K I LNP + 
Sbjct: 948 EALESFDRALQIQPDYPNAYYNKAICYAFQGQVKLALENLQKAIELNPKYR 998


>gi|88602246|ref|YP_502424.1| tetratricopeptide TPR_2 [Methanospirillum hungatei JF-1]
 gi|88187708|gb|ABD40705.1| Tetratricopeptide TPR_2 [Methanospirillum hungatei JF-1]
          Length = 635

 Score = 67.8 bits (164), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 88/435 (20%), Positives = 176/435 (40%), Gaps = 102/435 (23%)

Query: 145 VHLHAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPN- 203
           V+L  A +F KA+  ++++  + P +  S+  +G I+    +YEEA+   DK +A +P  
Sbjct: 192 VNLVQAGEFEKAYPFIEKSLTIQPELTLSWLYKGFIHHNRKEYEEAITCFDKVLAKDPFQ 251

Query: 204 -----------FHVARAQRHFVVHKMIVPGDRERVE---------QSLKEFRNFVDTHSN 243
                      FH+ +  +       ++  DR+++          ++LK ++   +   N
Sbjct: 252 IRAWLFKGYSLFHLHQDDKALECFDRVIKEDRKQLRAIIYKGYCLKNLKRYKEAGNAFDN 311

Query: 244 VV------------------------EACTLFAQVL-VDQEDFDGA-------------E 265
            +                        EA   F +VL +D+ +                 +
Sbjct: 312 AIQLSPRDLNLRLNRGICLFEDKQFYEALNAFDKVLELDKRNLSAWLYKIRSLIRMERIQ 371

Query: 266 EYFNRS---IRVDPENASLYVHRAMLMLQARGNVDEAIKLIEKAISIDKSCMFAYETLGT 322
           E F  S   + + P   S+++ RA L+L+ +  V+EA+   +K++ +DK     +   G 
Sbjct: 372 EAFQSSGKLLEIQPREVSVWLARADLLLKMK-KVEEALDATKKSLLLDKWNPDTWSLRGL 430

Query: 323 IEVQRGRLEEAVKCFNKALPLARDEAELSHIYSLRDAAIAQMKVCERYNIKKKVSPRSQN 382
              + G+  EA++C++ AL                                 K++P+  +
Sbjct: 431 CFYKLGKFNEALQCYDNAL---------------------------------KINPKHLD 457

Query: 383 ITKNEKLAIKQLRENNDII--IRPADKGGKTVVMDKADYTQKMTSILNSNDYEIIPGDPT 440
             KN  L + +L+ ++D +     A  G    +  +A + + +  +  + +Y+       
Sbjct: 458 AMKNRALCLHKLKRHSDALEYYEHAIAGNPHNI--EAWFNRGLI-LHKAKNYDEALHSYD 514

Query: 441 KTIEESEKYGNLENESGQKH-AASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQY 499
           K IE  + +       G  H     + +A     +A  VDP+ A ++Y  G IY    ++
Sbjct: 515 KVIELDKFHAKAYFNKGLIHRQLEQYFEALQAFSQATSVDPSFASAWYHMGLIYTDLVRH 574

Query: 500 EEALRNLDKTIALNP 514
           +EAL+  DKT+ LNP
Sbjct: 575 KEALQCYDKTLKLNP 589



 Score = 46.2 bits (108), Expect = 0.043,   Method: Compositional matrix adjust.
 Identities = 74/334 (22%), Positives = 137/334 (41%), Gaps = 52/334 (15%)

Query: 43  DGLSNGVELTNGDTNESHELDLLSKAKRAFEHEDYLTAIRHCTEEIESTSSNHTKALARL 102
           +   N ++L+  D N       L++    FE + +  A+    + +E    N +   A L
Sbjct: 307 NAFDNAIQLSPRDLNLR-----LNRGICLFEDKQFYEALNAFDKVLELDKRNLS---AWL 358

Query: 103 LRATVYIFTSQSTKAIEDLTQLVEDTSVDPKIKVNAHIKRAVVHLHA-----ASDFTKAF 157
            +    I   +  +A +   +L+E   + P+ +V+  + RA + L       A D TK  
Sbjct: 359 YKIRSLIRMERIQEAFQSSGKLLE---IQPR-EVSVWLARADLLLKMKKVEEALDATKKS 414

Query: 158 ADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQRHFVVHK 217
             LD   K +P   D++  RG  +   G++ EAL+  D  + +NP    A   R   +HK
Sbjct: 415 LLLD---KWNP---DTWSLRGLCFYKLGKFNEALQCYDNALKINPKHLDAMKNRALCLHK 468

Query: 218 M------------IVPGDRERVEQSL---------KEFRNFVDTHSNVVE-----ACTLF 251
           +             + G+   +E            K +   + ++  V+E     A   F
Sbjct: 469 LKRHSDALEYYEHAIAGNPHNIEAWFNRGLILHKAKNYDEALHSYDKVIELDKFHAKAYF 528

Query: 252 AQVLVDQ--EDFDGAEEYFNRSIRVDPENASLYVHRAMLMLQARGNVDEAIKLIEKAISI 309
            + L+ +  E +  A + F+++  VDP  AS + H  ++      +  EA++  +K + +
Sbjct: 529 NKGLIHRQLEQYFEALQAFSQATSVDPSFASAWYHMGLIYTDLVRH-KEALQCYDKTLKL 587

Query: 310 DKSCMFAYETLGTIEVQRGRLEEAVKCFNKALPL 343
           +   + A    G I    G  +EA  CF KA  L
Sbjct: 588 NPKHIGALLNKGVILEDAGLKKEAFMCFQKAANL 621


>gi|145550908|ref|XP_001461132.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
 gi|124428964|emb|CAK93756.1| unnamed protein product [Paramecium tetraurelia]
          Length = 757

 Score = 67.8 bits (164), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 86/362 (23%), Positives = 155/362 (42%), Gaps = 44/362 (12%)

Query: 185 GQYEEALRNLDKTIALNPNFHVARAQRHFVVHKMIVPGDRERVEQSLKEFRNFVDTHSNV 244
           G+ +EAL   DK + LNPN  +    R  + + M      E+ E++L ++   ++ +S  
Sbjct: 30  GRTDEALLEYDKALILNPNNSLIYHNRGILYYNM------EKNEEALLDYNKAIELNSQD 83

Query: 245 VEACTLFAQVLVDQEDFDGAEEYFNRSIRVDPENASLYVHRAMLMLQARGNVDEAIKLIE 304
            +       +  D    D A   FN++I++DP  +  Y  RAML +   G  D+A+    
Sbjct: 84  SKIYNNRGNLYSDLGRSDDALNDFNQAIKLDPNFSDAYNSRAMLYVDL-GKNDQALIDFG 142

Query: 305 KAISIDKSCMFAYETLGTIEVQRGRLEEAVKCFNKALPLARDEAELSHIYSLRDAAIAQM 364
           +AI + K+     +  G +     + +EA+K FN+A+ L ++++ L     L  A I Q 
Sbjct: 143 QAIKL-KAQSNILKNRGILLFNLNQFDEALKDFNEAINLTQNDSTLY----LNAAIILQA 197

Query: 365 K-----VCERYNIKKKVSPRSQNITKNEKLAIKQLRENNDIIIRPADKGGKTVVMDKADY 419
           +       E YN+  K++   Q   K+  +    L E    +        K +++   D+
Sbjct: 198 QNKNQEALEHYNLSIKLNTNDQRAYKSRAMLYSNLGE----VQLAVSDLSKAILLKSDDF 253

Query: 420 TQ-----KMTSILNSNDYEIIPGDPTKTIEESEKY-------GNLENESGQKHAA-SDFT 466
                  K+          +   D  ++I  + KY       G L  E G+ + A SDF+
Sbjct: 254 NAYYHRGKLIIYWKQKQLNLALQDFNQSIRLNPKYQNAYDCRGCLFLELGENNKAESDFS 313

Query: 467 KAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIAL---NPNFHVARAQR 523
           K+        +++   ++SY   G  +   G Y+EAL+N  + I L   N  + +   Q 
Sbjct: 314 KSI-------ELNTRSSNSYNNLGNFFVSIGNYQEALKNYQQAIQLDAYNSIYLINLGQL 366

Query: 524 HF 525
           H 
Sbjct: 367 HL 368



 Score = 65.1 bits (157), Expect = 9e-08,   Method: Compositional matrix adjust.
 Identities = 63/245 (25%), Positives = 118/245 (48%), Gaps = 21/245 (8%)

Query: 104 RATVYIFTSQSTKAIEDLTQLVEDTSVDPKIKVNAHIKRAVVHLHAASDFTK---AFADL 160
           R  +Y    ++ +A+ D  + +E  S D KI  N    R  ++    SD  +   A  D 
Sbjct: 56  RGILYYNMEKNEEALLDYNKAIELNSQDSKIYNN----RGNLY----SDLGRSDDALNDF 107

Query: 161 DEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQRHFVVHKMIV 220
           ++A K+DPN +D+Y  R  +Y   G+ ++AL +  + I L       +AQ + + ++ I+
Sbjct: 108 NQAIKLDPNFSDAYNSRAMLYVDLGKNDQALIDFGQAIKL-------KAQSNILKNRGIL 160

Query: 221 PGDRERVEQSLKEFRNFVDTHSNVVEACTLFAQVLVDQEDFDGAEEYFNRSIRVDPENAS 280
             +  + +++LK+F   ++   N        A +L  Q     A E++N SI+++  +  
Sbjct: 161 LFNLNQFDEALKDFNEAINLTQNDSTLYLNAAIILQAQNKNQEALEHYNLSIKLNTNDQR 220

Query: 281 LYVHRAMLMLQARGNVDEAIKLIEKAISIDKSCMFAYETLGTIEV--QRGRLEEAVKCFN 338
            Y  RAML     G V  A+  + KAI +      AY   G + +  ++ +L  A++ FN
Sbjct: 221 AYKSRAMLY-SNLGEVQLAVSDLSKAILLKSDDFNAYYHRGKLIIYWKQKQLNLALQDFN 279

Query: 339 KALPL 343
           +++ L
Sbjct: 280 QSIRL 284



 Score = 45.4 bits (106), Expect = 0.073,   Method: Compositional matrix adjust.
 Identities = 52/246 (21%), Positives = 114/246 (46%), Gaps = 12/246 (4%)

Query: 97  KALARLL--RATVYIFTSQSTKAIEDLTQLVEDTSVDPKIKVNAHIKRAVVHLHAASDFT 154
           KA + +L  R  +    +Q  +A++D  + +  T  D  + +NA    A++ L A +   
Sbjct: 148 KAQSNILKNRGILLFNLNQFDEALKDFNEAINLTQNDSTLYLNA----AII-LQAQNKNQ 202

Query: 155 KAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQRHFV 214
           +A    + + K++ N   +Y  R  +Y   G+ + A+ +L K I L  +   A   R   
Sbjct: 203 EALEHYNLSIKLNTNDQRAYKSRAMLYSNLGEVQLAVSDLSKAILLKSDDFNAYYHRG-- 260

Query: 215 VHKMIVPGDRERVEQSLKEFRNFVDTHSNVVEACTLFAQVLVDQEDFDGAEEYFNRSIRV 274
             K+I+   ++++  +L++F   +  +     A      + ++  + + AE  F++SI +
Sbjct: 261 --KLIIYWKQKQLNLALQDFNQSIRLNPKYQNAYDCRGCLFLELGENNKAESDFSKSIEL 318

Query: 275 DPENASLYVHRAMLMLQARGNVDEAIKLIEKAISIDKSCMFAYETLGTIEVQRGRLEEAV 334
           +  +++ Y +     + + GN  EA+K  ++AI +D         LG + ++    ++A 
Sbjct: 319 NTRSSNSYNNLGNFFV-SIGNYQEALKNYQQAIQLDAYNSIYLINLGQLHLKLNDFQQAF 377

Query: 335 KCFNKA 340
             F +A
Sbjct: 378 IFFLQA 383


>gi|148558498|ref|YP_001257882.1| hypothetical protein BOV_A0905 [Brucella ovis ATCC 25840]
 gi|148369783|gb|ABQ62655.1| TPR domain protein [Brucella ovis ATCC 25840]
          Length = 295

 Score = 67.8 bits (164), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 54/183 (29%), Positives = 86/183 (46%), Gaps = 7/183 (3%)

Query: 167 DPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQRHFVVHKMIVPGDRER 226
           +P   + Y  RG  Y    +Y+EA+R+ D+ IALNPNF+ A A R  V   M   GD  +
Sbjct: 76  NPRDPEGYNVRGSAYGKARRYKEAMRDFDQAIALNPNFYQAYANRALVDRYM---GDNNK 132

Query: 227 VEQSLKEFRNFVDTHSNVVEACTLFAQVLVDQEDFDGAEEYFNRSIRVDPENASLYVHRA 286
              +++++   +  +     A      V       D A   FN++I +   +   Y +R 
Sbjct: 133 ---AVQDYSRAIQLNPQYDAAYIGRGNVYRQAGHLDQALNDFNQAIALRTTDGRAYHNRG 189

Query: 287 MLMLQARGNVDEAIKLIEKAISIDKSCMFAYETLGTIEVQRGRLEEAVKCFNKALPLARD 346
            L+ QA+G   +AI+   KAIS++ +    Y   G   V  G  + A   FN A+ L ++
Sbjct: 190 -LIYQAKGLHKQAIEDFSKAISLNSTAPEPYNGRGISYVALGDYDNAFDDFNTAITLDQN 248

Query: 347 EAE 349
            AE
Sbjct: 249 VAE 251



 Score = 48.1 bits (113), Expect = 0.012,   Method: Compositional matrix adjust.
 Identities = 47/208 (22%), Positives = 92/208 (44%), Gaps = 12/208 (5%)

Query: 103 LRATVYIFTSQSTKAIEDLTQLVEDTSVDPKIKVNAHIKRAVVHLHAASDFTKAFADLDE 162
           +R + Y    +  +A+ D  Q +   +++P     A+  RA+V  +   D  KA  D   
Sbjct: 85  VRGSAYGKARRYKEAMRDFDQAI---ALNPNF-YQAYANRALVDRYMG-DNNKAVQDYSR 139

Query: 163 AEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQRHFVVHKMIVPG 222
           A +++P    +Y  RG +Y   G  ++AL + ++ IAL      A   R  +     +  
Sbjct: 140 AIQLNPQYDAAYIGRGNVYRQAGHLDQALNDFNQAIALRTTDGRAYHNRGLIYQAKGLH- 198

Query: 223 DRERVEQSLKEFRNFVDTHSNVVEACTLFAQVLVDQEDFDGAEEYFNRSIRVDPENASLY 282
                +Q++++F   +  +S   E         V   D+D A + FN +I +D   A  +
Sbjct: 199 -----KQAIEDFSKAISLNSTAPEPYNGRGISYVALGDYDNAFDDFNTAITLDQNVAESW 253

Query: 283 VHRAMLMLQARGNVDEAIKLIEKAISID 310
            ++A L+ +  G+  +A     +A+ +D
Sbjct: 254 ANQA-LVYEHNGDKAKAANSYARAVQLD 280



 Score = 44.3 bits (103), Expect = 0.16,   Method: Compositional matrix adjust.
 Identities = 21/48 (43%), Positives = 29/48 (60%)

Query: 479 DPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQRHFV 526
           +P   + Y  RG  Y    +Y+EA+R+ D+ IALNPNF+ A A R  V
Sbjct: 76  NPRDPEGYNVRGSAYGKARRYKEAMRDFDQAIALNPNFYQAYANRALV 123



 Score = 38.9 bits (89), Expect = 6.9,   Method: Compositional matrix adjust.
 Identities = 26/105 (24%), Positives = 50/105 (47%), Gaps = 5/105 (4%)

Query: 104 RATVYIFTSQSTKAIEDLTQLVEDTSVDPKIKVNAHIKRAVVHLHAASDFTKAFADLDEA 163
           R  +Y       +AIED ++ +   S  P+     +  R + ++ A  D+  AF D + A
Sbjct: 188 RGLIYQAKGLHKQAIEDFSKAISLNSTAPE----PYNGRGISYV-ALGDYDNAFDDFNTA 242

Query: 164 EKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVAR 208
             +D NVA+S+  +  +Y   G   +A  +  + + L+P +  A+
Sbjct: 243 ITLDQNVAESWANQALVYEHNGDKAKAANSYARAVQLDPKYKPAK 287


>gi|119509305|ref|ZP_01628455.1| hypothetical protein N9414_15180 [Nodularia spumigena CCY9414]
 gi|119466147|gb|EAW47034.1| hypothetical protein N9414_15180 [Nodularia spumigena CCY9414]
          Length = 608

 Score = 67.8 bits (164), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 95/418 (22%), Positives = 182/418 (43%), Gaps = 39/418 (9%)

Query: 117 AIEDLTQLVEDTSVDPKIKVNAHIKRAVVHLHAASDFTKAFADLDEAEKVDPNVADSYYQ 176
           AI +  Q +E   ++P+    A+  RA    +   D+  A AD D+A ++ PN   SY+ 
Sbjct: 57  AIANFDQALE---INPQF-AEAYCNRANAR-YFLGDYEGAIADFDQAIEIKPNFTQSYHS 111

Query: 177 RGQIYCLFGQYEEALRNLDKTIALNP------NFHVARAQRHFVVHKMIVPGDRERVEQS 230
           RG  Y    +Y++A+ N  + I  +P      N  +A+A    + ++ +   +    + +
Sbjct: 112 RGNAYLALEKYDQAIANYQQAIENSPELATQINCDIAKA----LHNRGVARCNYGDYQGA 167

Query: 231 LKEFRNFVDTHSNVVEACTLFAQVLVDQEDFDGAEEYFNRSIRVDPENASLYVHRAMLML 290
           + +F+  +  H     A +    +     ++  A    +R++++DP  A +Y +R     
Sbjct: 168 IADFQQALQWHPYFAPAYSSRGNIYQILGEYQQAIAEHDRALQLDPNLAEVYHNRGNARY 227

Query: 291 QARGNVDEAIKLIEKAISIDKSCMFAYETLGTIEVQRGRLEEAVKCFNKALPLARDEAEL 350
            A G+   AIK    A+ I      AY   G +  +     +A+  FN+AL L  D+ + 
Sbjct: 228 -ALGDNQGAIKDYNYALKIKPHFAEAYYNRGLVYSRLKDFPQAIADFNQALILNPDDVQ- 285

Query: 351 SHIYSLRDAAIAQMKVCERYNIKKKVSPRSQNITKNEKLA--------IKQLRENNDIII 402
              YS R   + +  + E Y   + +   SQ + KN  LA        +++L  +    I
Sbjct: 286 --AYSER--GLIRETLGEYY---QALEDYSQALQKNPTLALVYGLRANVRRLLGDYQGAI 338

Query: 403 RPADKGGKTVVMDKADYTQKMTSILNSNDYEIIPGDPTKTIEESEKYGNL-ENESGQKHA 461
             +++  K        Y  + T+     DY+    D T  ++ +    NL E   G+  A
Sbjct: 339 DDSNQSLKLHPHLAQGYCDRATTRRIQGDYQGAVQDYTMALQIN---CNLAEAYYGRAIA 395

Query: 462 ---ASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNF 516
                DF  A AD  +A ++ P+ + +Y  RG  +      ++A+ + ++ +A+NP+ 
Sbjct: 396 YEFLQDFAAAVADNTQAIQMFPDFSPAYCNRGNAHRFLRNEKQAMADYNQALAINPDL 453



 Score = 65.5 bits (158), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 92/447 (20%), Positives = 181/447 (40%), Gaps = 56/447 (12%)

Query: 76  DYLTAIRHCTEEIE----STSSNHTKALARLLRATVYIFTSQSTKAIEDLTQLVEDTSVD 131
           DY  AI    + IE     T S H+       R   Y+   +  +AI +  Q +E+ S +
Sbjct: 87  DYEGAIADFDQAIEIKPNFTQSYHS-------RGNAYLALEKYDQAIANYQQAIEN-SPE 138

Query: 132 PKIKVNAHIKRAVVHLHAA----SDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQY 187
              ++N  I +A+ +   A     D+  A AD  +A +  P  A +Y  RG IY + G+Y
Sbjct: 139 LATQINCDIAKALHNRGVARCNYGDYQGAIADFQQALQWHPYFAPAYSSRGNIYQILGEY 198

Query: 188 EEALRNLDKTIALNPNFHVARAQRHFVVHKMIVPGDRERVEQSLKEFRNFVDTHSNVVEA 247
           ++A+   D+ + L+PN       R    + +   GD +    ++K++   +    +  EA
Sbjct: 199 QQAIAEHDRALQLDPNLAEVYHNRGNARYAL---GDNQG---AIKDYNYALKIKPHFAEA 252

Query: 248 CTLFAQVLVDQEDFDGAEEYFNRSIRVDPENASLYVHRAMLMLQARGNVDEAIKLIEKAI 307
                 V    +DF  A   FN+++ ++P++   Y  R  L+ +  G   +A++   +A+
Sbjct: 253 YYNRGLVYSRLKDFPQAIADFNQALILNPDDVQAYSERG-LIRETLGEYYQALEDYSQAL 311

Query: 308 SIDKSCMFAYETLGTIEVQRGRLEEAVKCFNKALPLARDEAELSHIYSLRDAAIAQMKVC 367
             + +    Y     +    G  + A+   N++L L      L+  Y            C
Sbjct: 312 QKNPTLALVYGLRANVRRLLGDYQGAIDDSNQSLKL---HPHLAQGY------------C 356

Query: 368 ERYNIKKKVSPRSQNITKNEKLAIKQLRENNDIIIRPADKGGKTVVMDKADYTQKMTSIL 427
           +R    +++    Q   ++  +A+ Q+  N    +  A  G         D+   +    
Sbjct: 357 DR-ATTRRIQGDYQGAVQDYTMAL-QINCN----LAEAYYGRAIAYEFLQDFAAAVAD-- 408

Query: 428 NSNDYEIIPGDPTKTIEESEKYGNLENESGQKHAASDFTKAFADLDEAEKVDPNVADSYY 487
           N+   ++ P            +  L NE           +A AD ++A  ++P++ ++YY
Sbjct: 409 NTQAIQMFPDFSPAYCNRGNAHRFLRNEK----------QAMADYNQALAINPDLVEAYY 458

Query: 488 QRGQIYCLFGQYEEALRNLDKTIALNP 514
            R  +      Y+ A+ +  + +  NP
Sbjct: 459 NRACLRYTLKDYQSAVADYTEALQRNP 485



 Score = 48.1 bits (113), Expect = 0.012,   Method: Compositional matrix adjust.
 Identities = 76/377 (20%), Positives = 153/377 (40%), Gaps = 94/377 (24%)

Query: 171 ADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQRHFVVHKMIVPGDRERVEQS 230
           AD ++Q+G    L G Y+EA+ N  + I L P++                          
Sbjct: 3   ADEFFQQGFNKHLQGDYQEAIANYTQAIQLYPDY-------------------------- 36

Query: 231 LKEFRNFVDTHSNVVEACTLFAQVLVDQEDFDGAEEYFNRSIRVDPENASLYVHRAMLML 290
                   + + N+     L A++    +D+ GA   F++++ ++P+ A  Y +RA    
Sbjct: 37  -------AEAYYNL--GIILSAEL----QDYHGAIANFDQALEINPQFAEAYCNRA---- 79

Query: 291 QAR---GNVDEAIKLIEKAISIDKSCMFAYETLGTIEVQRGRLEEAVKCFNKAL---PLA 344
            AR   G+ + AI   ++AI I  +   +Y + G   +   + ++A+  + +A+   P  
Sbjct: 80  NARYFLGDYEGAIADFDQAIEIKPNFTQSYHSRGNAYLALEKYDQAIANYQQAIENSPEL 139

Query: 345 RDEAELSHIYSLRDAAIAQMKVCERYNIKKKVSPRSQNITKNEKLAIKQLRENNDIIIRP 404
             +       +L +  +A+   C   + +  ++   Q +  +   A             P
Sbjct: 140 ATQINCDIAKALHNRGVAR---CNYGDYQGAIADFQQALQWHPYFA-------------P 183

Query: 405 ADKGGKTVVMDKADYTQKMTSILNSNDYEIIPGDPTKTIEESEKYGNLE--------NES 456
           A             Y+ +       N Y+I+ G+  + I E ++   L+        N  
Sbjct: 184 A-------------YSSR------GNIYQIL-GEYQQAIAEHDRALQLDPNLAEVYHNRG 223

Query: 457 GQKHAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNF 516
             ++A  D   A  D + A K+ P+ A++YY RG +Y     + +A+ + ++ + LNP+ 
Sbjct: 224 NARYALGDNQGAIKDYNYALKIKPHFAEAYYNRGLVYSRLKDFPQAIADFNQALILNPDD 283

Query: 517 HVARAQRHFVWTSTLAE 533
             A ++R  +   TL E
Sbjct: 284 VQAYSERGLI-RETLGE 299



 Score = 40.0 bits (92), Expect = 3.2,   Method: Compositional matrix adjust.
 Identities = 52/263 (19%), Positives = 117/263 (44%), Gaps = 27/263 (10%)

Query: 114 STKAIE-DLTQLVEDTSVDPKIKVN---AHIKRAVVHLHAASDFTKAFADLDEAEKVDPN 169
           +T+ I+ D    V+D ++  +I  N   A+  RA+ +     DF  A AD  +A ++ P+
Sbjct: 360 TTRRIQGDYQGAVQDYTMALQINCNLAEAYYGRAIAY-EFLQDFAAAVADNTQAIQMFPD 418

Query: 170 VADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQRHFVVHKMIVPGDRERVEQ 229
            + +Y  RG  +      ++A+ + ++ +A+NP+   A   R  + +             
Sbjct: 419 FSPAYCNRGNAHRFLRNEKQAMADYNQALAINPDLVEAYYNRACLRY------------- 465

Query: 230 SLKEFRNFVDTHSNVVEACTLFAQVLVDQ-------EDFDGAEEYFNRSIRVDPENASLY 282
           +LK++++ V  ++  ++     A    D+       +D+ GA   +++++ +D   A  +
Sbjct: 466 TLKDYQSAVADYTEALQRNPQSATFYSDRANARYALQDYHGAIADYHQALAIDSSRAEDW 525

Query: 283 VHRAMLMLQARGNVDEAIKLIEKAISIDKSCMFAYETLGTIEVQRGRLEEAVKCFNKALP 342
            +R    L   G++  A+  + +A+        AY     I  Q    + A+  F K+  
Sbjct: 526 YNRGR-SLSMLGDLTAALADLNQALQCQPYWASAYMLRADIRRQLEDYQGAIADFQKSAD 584

Query: 343 LARDEAELSHIYSLRDAAIAQMK 365
           +   +  + +   + + AIAQ++
Sbjct: 585 IYNRDGNIEYYQQILE-AIAQLE 606


>gi|27380734|ref|NP_772263.1| hypothetical protein blr5623 [Bradyrhizobium japonicum USDA 110]
 gi|27353899|dbj|BAC50888.1| TPR domain protein [Bradyrhizobium japonicum USDA 110]
          Length = 708

 Score = 67.8 bits (164), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 78/332 (23%), Positives = 151/332 (45%), Gaps = 58/332 (17%)

Query: 54  GDTNESHELDLLSKAKRAFEH-----EDYLTAIRHCTEEIESTSSNHTKALARLLRATVY 108
           G   + H+  LL++A+ A+        D   A+ H    +ES + N+ +A   L RA   
Sbjct: 28  GQALQLHKQGLLAQAQAAYRQVLQLAPDQFIAL-HMLGSLESDTKNYQQAEILLSRAVAV 86

Query: 109 IFTSQSTK-----AIEDLTQLVEDT-SVDPKIKVNAHIKRAVVHLHAAS---DFTKAFAD 159
              S         A+  L +  E   S    + +  +   A+ +L  AS   D  +A A 
Sbjct: 87  DPRSADAHMSRGVALNGLRRHGEACESYRRALALRPNFAVALSNLGNASVTLDLQEALAC 146

Query: 160 LDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQRHFVVHKMI 219
            D+A  +D N+A+++  RG + C    Y+EA+ +L++ +A+ P +  A A R   + +++
Sbjct: 147 FDKALAIDGNLAEAHNGRGWVLCRLRNYDEAIASLNRALAIKPAYASALANRALALQELL 206

Query: 220 VPGDRERVEQSLKEFRNFVDTHSNVVEACTLFAQVLVDQEDFDGAEEYFNRSIRVDPENA 279
                 R+++++ +              C                    N++I V+P + 
Sbjct: 207 ------RIDEAMAD--------------C--------------------NQAIAVEPNDM 226

Query: 280 SLYVHRAMLMLQARGNVDEAIKLIEKAISIDKSCMFAYETLGTIEVQRGRLEEAVKCFNK 339
           + ++ RA + LQ + ++ EA+   EKAI++D   + A+   G      GR++EA+  +++
Sbjct: 227 NGWLGRASVWLQVQ-HMAEALHDSEKAIAVDPDAVQAHLVRGICLAALGRVDEALASYDR 285

Query: 340 ALPLARD--EAELSHIYSLRDAAIAQMKVCER 369
           AL +  D   A  + I++L  AA A ++  +R
Sbjct: 286 ALEIEPDFPSAISNKIFTLDFAADASVEQHQR 317



 Score = 46.6 bits (109), Expect = 0.037,   Method: Compositional matrix adjust.
 Identities = 27/86 (31%), Positives = 44/86 (51%), Gaps = 5/86 (5%)

Query: 457 GQKHAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNF 516
           G      D  +A A  D+A  +D N+A+++  RG + C    Y+EA+ +L++ +A+ P +
Sbjct: 132 GNASVTLDLQEALACFDKALAIDGNLAEAHNGRGWVLCRLRNYDEAIASLNRALAIKPAY 191

Query: 517 HVARAQRHFVWTSTLAELMAFSDEFM 542
             A A R       L EL+   DE M
Sbjct: 192 ASALANRAL----ALQELLRI-DEAM 212


>gi|113476445|ref|YP_722506.1| sulfotransferase [Trichodesmium erythraeum IMS101]
 gi|110167493|gb|ABG52033.1| sulfotransferase [Trichodesmium erythraeum IMS101]
          Length = 832

 Score = 67.8 bits (164), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 56/242 (23%), Positives = 113/242 (46%), Gaps = 16/242 (6%)

Query: 156 AFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQRHFVV 215
           A A  +++ K +PN+  +++  G+ Y    +++ A+ +  K I LNP F    +  H  +
Sbjct: 165 AIACYEQSLKFNPNLYQAHHNLGEFYSQEEKWQAAISSYQKAIKLNPKF----SWSHHSL 220

Query: 216 HKMIVPGDRERVEQSLKEFRNFVDTHSNVVEACTLFAQVLVDQEDFDGAEEYFNRSIRVD 275
            K     + ++ E+++  ++  +  +S            LV  +  D A   + +SI + 
Sbjct: 221 GKAF--ANTQQWEKAISSYQEALQLNSQDAVTYHCLGDALVKHKQLDAAISAYQKSIELK 278

Query: 276 PENASLYVHRAMLMLQARGNVDEAIKLIEKAISIDKSCMFAYETLGTIEVQRGRLEEAVK 335
           PE   ++ H+   + Q +G +D AI    KAI ++ + +++Y +LG   +Q     EAV 
Sbjct: 279 PETWVVH-HKLANIFQEKGELDAAIVAYHKAIKLNPNFLWSYYSLGETLIQLKIWNEAVV 337

Query: 336 CFNKALPLARDEAELSHIYSLRDAAIAQMKVCERYNIKKKVSPRS---QNITKNEKLAIK 392
            +  A  + +D   L  IY     A+ +     + N+K+ ++  S   QN  + +   IK
Sbjct: 338 AYLYAFKINQD---LPSIYERLGYALEKQ---SQSNLKETINYYSEIIQNYQQQKSTPIK 391

Query: 393 QL 394
           +L
Sbjct: 392 EL 393



 Score = 45.8 bits (107), Expect = 0.066,   Method: Compositional matrix adjust.
 Identities = 46/206 (22%), Positives = 91/206 (44%), Gaps = 15/206 (7%)

Query: 152 DFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQR 211
           ++ +A A   +A K++PN A +Y    +IY    + E A     K   L P   +A    
Sbjct: 91  EWDQAVASYQKATKLEPNFASAYRALAEIYHQIDKPELAASCQYKAFILKP--ELATDLE 148

Query: 212 HFVVHKMIVPGDRER-----VEQSLKEFRNFVDTHSNVVEACTLFAQVLVDQEDFDGAEE 266
           +  + K ++  +R++      EQSLK   N    H N+ E    ++Q    +E +  A  
Sbjct: 149 YLNLGKTLLTYNRKKEAIACYEQSLKFNPNLYQAHHNLGE---FYSQ----EEKWQAAIS 201

Query: 267 YFNRSIRVDPENASLYVHRAMLMLQARGNVDEAIKLIEKAISIDKSCMFAYETLGTIEVQ 326
            + ++I+++P+  S   H            ++AI   ++A+ ++      Y  LG   V+
Sbjct: 202 SYQKAIKLNPK-FSWSHHSLGKAFANTQQWEKAISSYQEALQLNSQDAVTYHCLGDALVK 260

Query: 327 RGRLEEAVKCFNKALPLARDEAELSH 352
             +L+ A+  + K++ L  +   + H
Sbjct: 261 HKQLDAAISAYQKSIELKPETWVVHH 286



 Score = 42.4 bits (98), Expect = 0.61,   Method: Compositional matrix adjust.
 Identities = 24/113 (21%), Positives = 53/113 (46%), Gaps = 1/113 (0%)

Query: 229 QSLKEFRNFVDTHSNVVEACTLFAQVLVDQEDFDGAEEYFNRSIRVDPENASLYVHRAML 288
           Q L   +N ++ +S    +      +L+  +  + A E + ++I++ PE    + +  +L
Sbjct: 452 QELTNCQNTINKNSKQFISHYKLGNILLKLQRLNQAAEAYIKAIKIKPEYPWFFFYSDLL 511

Query: 289 -MLQARGNVDEAIKLIEKAISIDKSCMFAYETLGTIEVQRGRLEEAVKCFNKA 340
             L  +G + + +   +KA   +   ++ Y  LG I  + G L+ A+K +  A
Sbjct: 512 DFLIKQGKIQQVLAFFQKATQENLESIWCYVNLGEILTKTGNLDAAIKNYQTA 564


>gi|402848922|ref|ZP_10897168.1| putative TPR repeat family protein [Rhodovulum sp. PH10]
 gi|402500798|gb|EJW12464.1| putative TPR repeat family protein [Rhodovulum sp. PH10]
          Length = 269

 Score = 67.8 bits (164), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 62/236 (26%), Positives = 112/236 (47%), Gaps = 12/236 (5%)

Query: 111 TSQSTKAIEDLTQLVEDTSVDPKIKVNAHIKRAVVHLHAASDFTKAFADLDEAEKVDPNV 170
           ++ S   +  LT ++     DP+    A+  R  V L  A  + +A AD D A  +DP  
Sbjct: 23  SAASPANLSSLTAVLAKNPNDPQ----AYNMRGSV-LGQAGRYKEALADFDRAITLDPRY 77

Query: 171 ADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQRHFVVHKMIVPGDRERVEQS 230
           A +Y  RG +Y   GQ E AL + D+ + ++P++ VA   R  +VH+    GD   +  +
Sbjct: 78  AQAYANRGLVYRQMGQIEPALADYDRALEIDPSYAVAHVGRG-MVHR--AKGD---LLAA 131

Query: 231 LKEFRNFVDTHSNVVEACTLFAQVLVDQEDFDGAEEYFNRSIRVDPENASLYVHRAMLML 290
           L++F   +    +  +A      +   Q  +  A + F+ +I +  + A  YV RA+  L
Sbjct: 132 LQDFNKAIQIRPDNAQAYYNRGLLYQSQRQYQYAIDDFSTAIGLSQQQAEPYVARALTYL 191

Query: 291 QARGNVDEAIKLIEKAISIDKSCMFAYETLGTIEVQRGRLEEAVKCFNKALPLARD 346
            A G+   A   ++ A+ ++   + A+ + G    ++   E+A   + KAL L +D
Sbjct: 192 -AIGDTKAAADDLDDAVQMEPENIQAWTSRGLAYERQNDREKAAGSYAKALALRKD 246



 Score = 55.5 bits (132), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 44/183 (24%), Positives = 81/183 (44%), Gaps = 41/183 (22%)

Query: 167 DPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQRHFVVHKMIVPGDRER 226
           +PN   +Y  RG +    G+Y+EAL + D+ I L+P +  A A R  V  +M       +
Sbjct: 40  NPNDPQAYNMRGSVLGQAGRYKEALADFDRAITLDPRYAQAYANRGLVYRQM------GQ 93

Query: 227 VEQSLKEFRNFVDTHSNVVEACTLFAQVLVDQEDFDGAEEYFNRSIRVDPENASLYVHRA 286
           +E +L ++                                  +R++ +DP  A  +V R 
Sbjct: 94  IEPALADY----------------------------------DRALEIDPSYAVAHVGRG 119

Query: 287 MLMLQARGNVDEAIKLIEKAISIDKSCMFAYETLGTIEVQRGRLEEAVKCFNKALPLARD 346
           M+  +A+G++  A++   KAI I      AY   G +   + + + A+  F+ A+ L++ 
Sbjct: 120 MVH-RAKGDLLAALQDFNKAIQIRPDNAQAYYNRGLLYQSQRQYQYAIDDFSTAIGLSQQ 178

Query: 347 EAE 349
           +AE
Sbjct: 179 QAE 181



 Score = 53.1 bits (126), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 36/124 (29%), Positives = 58/124 (46%), Gaps = 18/124 (14%)

Query: 423 MTSILNSNDYEIIPGDPTKTIEESEKYGNLENESGQKHAASDFTKAFADLDEAEKVDPNV 482
           +T++L  N     P DP    +     G++  ++G+      + +A AD D A  +DP  
Sbjct: 33  LTAVLAKN-----PNDP----QAYNMRGSVLGQAGR------YKEALADFDRAITLDPRY 77

Query: 483 ADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNF---HVARAQRHFVWTSTLAELMAFSD 539
           A +Y  RG +Y   GQ E AL + D+ + ++P++   HV R   H      LA L  F+ 
Sbjct: 78  AQAYANRGLVYRQMGQIEPALADYDRALEIDPSYAVAHVGRGMVHRAKGDLLAALQDFNK 137

Query: 540 EFMI 543
              I
Sbjct: 138 AIQI 141


>gi|302838049|ref|XP_002950583.1| hypothetical protein VOLCADRAFT_91119 [Volvox carteri f. nagariensis]
 gi|300264132|gb|EFJ48329.1| hypothetical protein VOLCADRAFT_91119 [Volvox carteri f. nagariensis]
          Length = 1402

 Score = 67.8 bits (164), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 73/300 (24%), Positives = 131/300 (43%), Gaps = 33/300 (11%)

Query: 117  AIEDLTQLVEDTSVDPKIKVNAHIKRAVVHLHAASDFTKAFADLDEAEKVDPNVADSYYQ 176
            A+ED T  ++   VDP+    AH  R +       DF  A AD   A  ++PN AD Y+ 
Sbjct: 913  AVEDYTAALQ---VDPQSSY-AHYNRGITR-DRLQDFAGAVADFTAAICLEPNSADFYHN 967

Query: 177  RGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQRHFVVHKMIVPGDRERVEQSLKEFRN 236
            RG      G +E A+++    I LNPN   A   R F   ++        V+Q++ ++  
Sbjct: 968  RGFALRKQGMFEAAVQDYTMAIKLNPNHCRAYYNRAFCHDRL------NHVQQAIDDYTK 1021

Query: 237  FVDTHSNVVEACTLFAQVLVDQEDFDGAEEYFNRSIRVDPENASLYVHRAMLML------ 290
             ++   N   A      +       D A + F+R+I  DP  A  Y  R +L+       
Sbjct: 1022 ALEMEPNNATALLNRGSLHERNGRSDMALQDFDRAIMGDPNCAQSYNARGVLLQHLGRLE 1081

Query: 291  QARGNVDEAIKLIE---------------KAISIDKSCMFAYETLGTIEVQRGRLEEAVK 335
            +A+ ++D A+ L++               +AIS+D   + +Y        + G  E A++
Sbjct: 1082 EAQSDLDMAVVLMQPPSALLFRNRAQDLTRAISLDPGDLLSYSRRAHCFRRMGEYESAIR 1141

Query: 336  CFNKALPLARDEAELSHIYSLRDAAIAQM-KVCERYNIKKKVSPRSQNITKNEKLAIKQL 394
             + +A+ L+ +  +L  I +   A I    +    Y+I   + P + + + N  +A+++L
Sbjct: 1142 DYTRAITLSPNNPKLHTIRAYCYAMIEWYNEAVMDYDIVISLEPGNAHASYNRSIALEKL 1201



 Score = 40.0 bits (92), Expect = 3.1,   Method: Compositional matrix adjust.
 Identities = 24/63 (38%), Positives = 31/63 (49%)

Query: 464  DFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQR 523
            DF  A AD   A  ++PN AD Y+ RG      G +E A+++    I LNPN   A   R
Sbjct: 943  DFAGAVADFTAAICLEPNSADFYHNRGFALRKQGMFEAAVQDYTMAIKLNPNHCRAYYNR 1002

Query: 524  HFV 526
             F 
Sbjct: 1003 AFC 1005



 Score = 39.7 bits (91), Expect = 4.1,   Method: Compositional matrix adjust.
 Identities = 70/312 (22%), Positives = 124/312 (39%), Gaps = 50/312 (16%)

Query: 244  VVEACTLFAQVL-VDQEDFDGAEEYFNRSIRVDPENASLYVHRAMLMLQARGNVDEAIKL 302
            +VEA   + + L +D   F   +  FNR    D        H  +  L   G ++ A++ 
Sbjct: 866  LVEAVREYTRALELDSNHF---KTLFNRGFTYD------RGHGWLSRLPPLGELEAAVED 916

Query: 303  IEKAISIDKSCMFAYETLGTIEVQRGRLEE---AVKCFNKALPLARDEAELSH--IYSLR 357
               A+ +D    +A+   G   + R RL++   AV  F  A+ L  + A+  H   ++LR
Sbjct: 917  YTAALQVDPQSSYAHYNRG---ITRDRLQDFAGAVADFTAAICLEPNSADFYHNRGFALR 973

Query: 358  DAAIAQMKVCERYNIKKKVSPRSQNITKNEKLAIKQLRENNDII--------IRPADKGG 409
               + +  V + Y +  K++P       N      +L      I        + P +   
Sbjct: 974  KQGMFEAAV-QDYTMAIKLNPNHCRAYYNRAFCHDRLNHVQQAIDDYTKALEMEPNNA-- 1030

Query: 410  KTVVMDKAD-YTQKMTSILNSNDYE-IIPGDPT---------------KTIEESEKYGNL 452
             T ++++   + +   S +   D++  I GDP                  +EE++   ++
Sbjct: 1031 -TALLNRGSLHERNGRSDMALQDFDRAIMGDPNCAQSYNARGVLLQHLGRLEEAQSDLDM 1089

Query: 453  ENESGQKHAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIAL 512
                 Q  +A  F     DL  A  +DP    SY +R   +   G+YE A+R+  + I L
Sbjct: 1090 AVVLMQPPSALLFRNRAQDLTRAISLDPGDLLSYSRRAHCFRRMGEYESAIRDYTRAITL 1149

Query: 513  NPN---FHVARA 521
            +PN    H  RA
Sbjct: 1150 SPNNPKLHTIRA 1161


>gi|15678111|ref|NP_275226.1| O-linked GlcNAc transferase [Methanothermobacter thermautotrophicus
           str. Delta H]
 gi|2621120|gb|AAB84589.1| O-linked GlcNAc transferase [Methanothermobacter thermautotrophicus
           str. Delta H]
          Length = 379

 Score = 67.8 bits (164), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 57/248 (22%), Positives = 113/248 (45%), Gaps = 43/248 (17%)

Query: 130 VDPKIKVNAHIKRAVVHLHAASDFTKAFADLDEAEKVDPNVADSYYQRGQI--------- 180
           ++PK    A   +A+V L     + +A    ++A +++P +AD++Y +G +         
Sbjct: 113 INPKY-AGAWNNKALV-LKELGRYDEALECYEKALQINPKLADAWYNKGSVLIYLKKYKK 170

Query: 181 ---------------YCLFGQ----------YEEALRNLDKTIALNPNFHVARAQRHFVV 215
                          Y  +G           YEEAL+  DK + LNP    A   +  V 
Sbjct: 171 ALKCFEKAIELNPKNYRAWGTKGITLHNLKIYEEALKCYDKVLQLNPQDDKAWNNKGLVF 230

Query: 216 HKMIVPGDRERVEQSLKEFRNFVDTHSNVVEACTLFAQVLVDQEDFDGAEEYFNRSIRVD 275
           +++       R ++SL+ +   +  +  + EA      VL +   ++ A E + +++ +D
Sbjct: 231 NEL------GRYDESLECYEKALQINPKLAEAWNNKGVVLSELGRYEEALECYEKALEID 284

Query: 276 PENASLYVHRAMLMLQARGNVDEAIKLIEKAISIDKSCMFAYETLGTIEVQRGRLEEAVK 335
           PE+   + ++  L+L+  G   +A++  +KA+ I+     A++  G I     + EE++K
Sbjct: 285 PEDDKTWNNKG-LVLEELGKYKDALECFQKALEINPEFADAWKWKGIILEDLKKPEESLK 343

Query: 336 CFNKALPL 343
           C+ KAL L
Sbjct: 344 CYKKALKL 351



 Score = 60.8 bits (146), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 80/348 (22%), Positives = 154/348 (44%), Gaps = 42/348 (12%)

Query: 185 GQYEEALRNLDKTIALNPNFHVARAQRHFVVHKMIVPGDRERVEQSLKEFRNFVDTHSNV 244
           G+Y+EAL+   K +   PN          + +  I     +R E++L+ +   +  +  +
Sbjct: 30  GKYKEALKEFRKALKARPN------NPEILHYNAITLLKLKRPEKALECYEKILKNNPKL 83

Query: 245 VEACTLFAQVLVDQEDFDGAEEYFNRSIRVDPENASLYVHRAMLMLQARGNVDEAIKLIE 304
            EA      VL +   +D A E + ++++++P+ A  + ++A L+L+  G  DEA++  E
Sbjct: 84  AEAWNNKGLVLKELGRYDEALECYEKALKINPKYAGAWNNKA-LVLKELGRYDEALECYE 142

Query: 305 KAISIDKSCMFAYETLGTIEVQRGRLEEAVKCFNKALPLARDEAELSHIYSLRDAAIAQM 364
           KA+ I+     A+   G++ +   + ++A+KCF KA+ L     +    +  +   +  +
Sbjct: 143 KALQINPKLADAWYNKGSVLIYLKKYKKALKCFEKAIEL---NPKNYRAWGTKGITLHNL 199

Query: 365 KVCER----YNIKKKVSPRSQNITKNEKLAIKQLRENNDII--------IRPA------D 406
           K+ E     Y+   +++P+      N+ L   +L   ++ +        I P       +
Sbjct: 200 KIYEEALKCYDKVLQLNPQDDKAWNNKGLVFNELGRYDESLECYEKALQINPKLAEAWNN 259

Query: 407 KGGKTVVMDKADYTQKMTSILNSNDYEIIPGDPTKTIEESEKYGNLENESGQKHAASDFT 466
           KG   V+ +   Y + +         EI P D  KT   + K   LE     K A   F 
Sbjct: 260 KG--VVLSELGRYEEALECY--EKALEIDPED-DKTW--NNKGLVLEELGKYKDALECFQ 312

Query: 467 KAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNP 514
           KA        +++P  AD++  +G I     + EE+L+   K + LNP
Sbjct: 313 KAL-------EINPEFADAWKWKGIILEDLKKPEESLKCYKKALKLNP 353



 Score = 60.5 bits (145), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 45/220 (20%), Positives = 97/220 (44%), Gaps = 39/220 (17%)

Query: 155 KAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQRHFV 214
           KA    ++  K +P +A+++  +G +    G+Y+EAL   +K + +NP +  A   +  V
Sbjct: 68  KALECYEKILKNNPKLAEAWNNKGLVLKELGRYDEALECYEKALKINPKYAGAWNNKALV 127

Query: 215 VHKMIVPGDRERVEQSLKEFRNFVDTHSNVVEACTLFAQVLVDQEDFDGAEEYFNRSIRV 274
           + ++       R +++L+ +   +  +  + +A      VL+  + +  A + F ++I +
Sbjct: 128 LKEL------GRYDEALECYEKALQINPKLADAWYNKGSVLIYLKKYKKALKCFEKAIEL 181

Query: 275 DPENASLYVHRAM---------------------------------LMLQARGNVDEAIK 301
           +P+N   +  + +                                 L+    G  DE+++
Sbjct: 182 NPKNYRAWGTKGITLHNLKIYEEALKCYDKVLQLNPQDDKAWNNKGLVFNELGRYDESLE 241

Query: 302 LIEKAISIDKSCMFAYETLGTIEVQRGRLEEAVKCFNKAL 341
             EKA+ I+     A+   G +  + GR EEA++C+ KAL
Sbjct: 242 CYEKALQINPKLAEAWNNKGVVLSELGRYEEALECYEKAL 281


>gi|281417167|ref|ZP_06248187.1| Tetratricopeptide TPR_2 repeat protein [Clostridium thermocellum
           JW20]
 gi|281408569|gb|EFB38827.1| Tetratricopeptide TPR_2 repeat protein [Clostridium thermocellum
           JW20]
          Length = 1056

 Score = 67.4 bits (163), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 95/406 (23%), Positives = 180/406 (44%), Gaps = 56/406 (13%)

Query: 132 PKIKVNAHIKRAVVHLHAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEAL 191
           PK+   A+++RA V L     + +A  D D+A  + P    + Y++  I C  G+Y+EA+
Sbjct: 442 PKVP-EAYVERAEV-LQFMQRYEEAKEDCDQALVLRPQFGSACYRKSLILCELGKYDEAI 499

Query: 192 RNLDKTIALNPNFHVARAQRHFVVHKMIVPGDRERVEQSLKEFRNFVDTHSNVVEACTLF 251
             L+K +       +A         K +   +  R E++L+    ++  +    E     
Sbjct: 500 EILEKLLDDEEFCDIAG------YFKGVALKNLGRYEEALEYVDGYITKYPGYREPYLEK 553

Query: 252 AQVLVDQEDFDGAEEYFNRSIRVDPENASLYVHRAMLMLQARGNVDEAIKLIEKA--ISI 309
           A +L+  E+++ A E  N  +  D E+    V ++ +  + +   +EA+K IE A  +S+
Sbjct: 554 ADILIALEEYEKAMEACNVLLDRDAEDIGALVKKSGVFFR-QDKFEEALKCIEDAMALSL 612

Query: 310 DKSCMFAYETLGTIEVQR--GRLEEAVKCFNKALPLARDE-----AELSHIYSLRDAAIA 362
           D   ++ Y+     E+ R  G+ EEA++ F+K +    +           +Y +R+   A
Sbjct: 613 DHHALYYYKA----EILRNMGKPEEAIEFFDKYIEKVPNHPNPYIGRAKSLYVMREYEKA 668

Query: 363 QMKVCERYNIKKKVSPRSQNITKNEKLA--IKQLRENNDII-----IRPADKGGKTVVMD 415
            ++ CE     K +S   + I      A  + Q+ +  D++     I+  D        D
Sbjct: 669 -LECCE-----KAISLDDKYIEGYYSKAHILLQMDKYKDVLELLDKIKEIDPEFPMFYYD 722

Query: 416 KADYTQKMTSILNSNDYEIIPGDPTKTIEESEKYGNLENESGQKH---AASDFT-----K 467
           +A+  ++M             G+  K ++E + Y     + G  H   A   FT     +
Sbjct: 723 RAEVFKRM-------------GNHEKALQEIDIYLEKFPDDGYAHEKRANILFTLGRLDE 769

Query: 468 AFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALN 513
           A  + D+A + +P + D+YY +G I    G+++E+L   DK I LN
Sbjct: 770 AIEECDKAIEFEPELLDAYYGKGYILYYTGRFKESLSYFDKVIELN 815



 Score = 60.1 bits (144), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 53/225 (23%), Positives = 111/225 (49%), Gaps = 8/225 (3%)

Query: 112 SQSTKAIEDLTQLVEDTSV-DPKIKVNAHIKRAVVHLHAASDFTKAFADLDEAEKVDPNV 170
           + + K ++++  +VE + + D   K+   +K      H    F +A    D+A  VD + 
Sbjct: 317 ADALKVLDNILNIVEASDIRDRNEKICTLLKCKGEAFHIMGKFNEAIECYDKALAVDKDR 376

Query: 171 ADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQRHFVVHKMIVPGDRERVEQS 230
           AD   ++G+ Y   G  +EA+   +K + +  ++++A    +F++   +     +  + +
Sbjct: 377 ADVLVKKGEAYNRLGMPQEAILMYEKALGVRNDYYIA----YFLMG--VTYKHLDEYQLA 430

Query: 231 LKEFRNFVDTHSNVVEACTLFAQVLVDQEDFDGAEEYFNRSIRVDPENASLYVHRAMLML 290
           L+ F  +++    V EA    A+VL   + ++ A+E  ++++ + P+  S   +R  L+L
Sbjct: 431 LEAFDCYINAVPKVPEAYVERAEVLQFMQRYEEAKEDCDQALVLRPQFGSA-CYRKSLIL 489

Query: 291 QARGNVDEAIKLIEKAISIDKSCMFAYETLGTIEVQRGRLEEAVK 335
              G  DEAI+++EK +  ++ C  A    G      GR EEA++
Sbjct: 490 CELGKYDEAIEILEKLLDDEEFCDIAGYFKGVALKNLGRYEEALE 534



 Score = 58.5 bits (140), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 60/258 (23%), Positives = 116/258 (44%), Gaps = 14/258 (5%)

Query: 104 RATVYIFTSQSTKAIEDLTQLVEDTSVDPKIKVNAHIKRAVVHLHAASDFTKAFADLDEA 163
           RA V+       KA++++   +E    D      AH KRA + L       +A  + D+A
Sbjct: 723 RAEVFKRMGNHEKALQEIDIYLEKFPDDGY----AHEKRANI-LFTLGRLDEAIEECDKA 777

Query: 164 EKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQRHFVVHKMIVPGD 223
            + +P + D+YY +G I    G+++E+L   DK I LN     A   +   +  +   GD
Sbjct: 778 IEFEPELLDAYYGKGYILYYTGRFKESLSYFDKVIELNSKSAYAYYSKGNALKYL---GD 834

Query: 224 RERVEQSLKEFRNFVDTHSNVVEACTLFAQVLVDQEDFDGAEEYFNRSIRVDPENASLYV 283
               E +L+ +   ++      E  +    +     ++  +  +++R+  + P+    Y+
Sbjct: 835 ---FEGALENYNYAINLWHEFAECYSAIGHLYFLVGNYTNSMIFYDRAESLKPDYIYPYI 891

Query: 284 HRAMLMLQARGNVDEAIKLIEKAISIDKSCMFAYETLGTIEVQRGRLEEAVKCFNKALPL 343
            ++ L +   G+++ AI+  +KA+ I       +   G I    G  +EAV  F  A+ L
Sbjct: 892 GKSQLYMTL-GDMESAIRYSDKALEISPDDAEVHNNKGKILGYFGMFDEAVSSFLTAIEL 950

Query: 344 ARDEAELSHIYSLRDAAI 361
              +AE  + Y+L +A +
Sbjct: 951 NDSQAE--YYYNLGNAYL 966



 Score = 53.9 bits (128), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 87/385 (22%), Positives = 173/385 (44%), Gaps = 60/385 (15%)

Query: 172 DSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQRHFVVHKMIVPGDRERVEQSL 231
           ++Y   G    + G+YEE +R  ++ +ALNP      ++ +F+  +      R R  ++L
Sbjct: 52  EAYVNLGYTLIILGKYEECIRYCNRALALNPQ---DASELYFIKAECFKKMKRYR--EAL 106

Query: 232 KEFRNFVDTHSNVVEACTLFAQVLVDQEDFDGAEEYFNR----SIRVDPENASLYVHRAM 287
           + +   V+    V     L A +L D E++D A E F+      ++ + +  S+++++  
Sbjct: 107 ENYIKAVEIRKRVFYLIPL-AILLYDMEEYDKALEIFDTLEALDLKYNDDLESIFLYKGK 165

Query: 288 LMLQARGNVDEAIKLIEKAISIDKSCMFAYETLGTIEVQRGR-------LEEAVKCFNKA 340
           +M + +G   EAI   +KA+ ++ +    Y+   +     GR       ++E++  + KA
Sbjct: 166 IM-EKKGRFKEAIDYFDKALEVNPANAEIYDKKASSLYYLGRDTDDMDLIKESIIYYRKA 224

Query: 341 LPLARDEAELSHIYSLRDAAIAQMKVCER-------YNIKKKVSP-----------RSQN 382
           L     E +  +++SL   A++ ++V          Y+   +V P              N
Sbjct: 225 L-----EIDGEYLHSLNGIAVS-LEVLGNADEALIYYDKALEVYPDFVLVHYNKANLLMN 278

Query: 383 ITKNEKL------AIKQLRENNDIIIRPADKGGKTVVMDK-ADYTQKMTSILNSNDYEII 435
           +++NE+       AI+  R   D  I  A+   K   M+K AD  + + +ILN     I+
Sbjct: 279 LSRNEEALYHYDKAIQIDRYCVDAYIEKAELLCK---MEKYADALKVLDNILN-----IV 330

Query: 436 PGDPTKTIEESEKYGNLENESGQK-HAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYC 494
                +  + +EK   L    G+  H    F +A    D+A  VD + AD   ++G+ Y 
Sbjct: 331 EASDIR--DRNEKICTLLKCKGEAFHIMGKFNEAIECYDKALAVDKDRADVLVKKGEAYN 388

Query: 495 LFGQYEEALRNLDKTIALNPNFHVA 519
             G  +EA+   +K + +  ++++A
Sbjct: 389 RLGMPQEAILMYEKALGVRNDYYIA 413



 Score = 53.5 bits (127), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 95/485 (19%), Positives = 195/485 (40%), Gaps = 96/485 (19%)

Query: 77  YLTAIRHCTEEIESTSSNHTKALARLLRATVYIFTSQSTKAIEDLTQLVED--TSVDPKI 134
           Y   IR+C         N   AL     + +Y   ++  K ++   + +E+   +V+ + 
Sbjct: 67  YEECIRYC---------NRALALNPQDASELYFIKAECFKKMKRYREALENYIKAVEIRK 117

Query: 135 KVNAHIKRAVVHLHAASDFTKAFADLDEAEKVDPNVADS----YYQRGQIYCLFGQYEEA 190
           +V   I  A++ L+   ++ KA    D  E +D    D     +  +G+I    G+++EA
Sbjct: 118 RVFYLIPLAIL-LYDMEEYDKALEIFDTLEALDLKYNDDLESIFLYKGKIMEKKGRFKEA 176

Query: 191 LRNLDKTIALNP-NFHVARAQRHFVVHKMIVPGDRERVEQSLKEFRNFVDTHSNVVEACT 249
           +   DK + +NP N  +   +   + +      D + +++S+  +R  ++     + +  
Sbjct: 177 IDYFDKALEVNPANAEIYDKKASSLYYLGRDTDDMDLIKESIIYYRKALEIDGEYLHSLN 236

Query: 250 LFAQVLVDQEDFDGAEEYFNRSIRVDPENASLYVHRAMLMLQARGNVDEAIKLIEKAISI 309
             A  L    + D A  Y+++++ V P+   ++ ++A L++    N +EA+   +KAI I
Sbjct: 237 GIAVSLEVLGNADEALIYYDKALEVYPDFVLVHYNKANLLMNLSRN-EEALYHYDKAIQI 295

Query: 310 DKSCMFAY---------------------ETLGTIEVQ---------------------- 326
           D+ C+ AY                       L  +E                        
Sbjct: 296 DRYCVDAYIEKAELLCKMEKYADALKVLDNILNIVEASDIRDRNEKICTLLKCKGEAFHI 355

Query: 327 RGRLEEAVKCFNKALPLARDEAELSHIYSLRDAAIAQMKVCERYNIKKKVSPRSQNITKN 386
            G+  EA++C++KAL + +D A++             +K  E YN  +   P+   +   
Sbjct: 356 MGKFNEAIECYDKALAVDKDRADV------------LVKKGEAYN--RLGMPQEAILMYE 401

Query: 387 EKLAIKQLRENNDIIIRPADKGGKTVVMDKADYT-QKMTSILNSNDYEIIPGDPTKTIEE 445
           + L ++     ND  I     G     +D+     +     +N+     +P  P   +E 
Sbjct: 402 KALGVR-----NDYYIAYFLMGVTYKHLDEYQLALEAFDCYINA-----VPKVPEAYVER 451

Query: 446 SEKYGNLENESGQKHAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRN 505
           +E    ++           + +A  D D+A  + P    + Y++  I C  G+Y+EA+  
Sbjct: 452 AEVLQFMQR----------YEEAKEDCDQALVLRPQFGSACYRKSLILCELGKYDEAIEI 501

Query: 506 LDKTI 510
           L+K +
Sbjct: 502 LEKLL 506



 Score = 50.1 bits (118), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 45/183 (24%), Positives = 86/183 (46%), Gaps = 12/183 (6%)

Query: 138  AHIKRAVVHLH-AASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDK 196
            A    A+ HL+    ++T +    D AE + P+    Y  + Q+Y   G  E A+R  DK
Sbjct: 853  AECYSAIGHLYFLVGNYTNSMIFYDRAESLKPDYIYPYIGKSQLYMTLGDMESAIRYSDK 912

Query: 197  TIALNPNFHVARAQRHFVVHKMIVPGDRERVEQSLKEFRNFVDTHSNVVEACTLFAQVLV 256
             + ++P+     A+ H   +K  + G     ++++  F   ++ + +  E         +
Sbjct: 913  ALEISPD----DAEVH--NNKGKILGYFGMFDEAVSSFLTAIELNDSQAEYYYNLGNAYL 966

Query: 257  DQEDFDGAEEYFNRSIRVDPENASLYVH--RAMLMLQARGNVDEAIKLIEKAISIDKSCM 314
               +F+ A E +N++I + PE  + YV   +A + L+   N++EA+K   KAI ++    
Sbjct: 967  MINEFENAIESYNKAINLYPEYEAAYVGIGKAQMCLE---NIEEALKNFNKAIELNPRSA 1023

Query: 315  FAY 317
             AY
Sbjct: 1024 EAY 1026



 Score = 44.7 bits (104), Expect = 0.12,   Method: Compositional matrix adjust.
 Identities = 53/212 (25%), Positives = 92/212 (43%), Gaps = 25/212 (11%)

Query: 147  LHAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNF-- 204
            L    DF  A  + + A  +    A+ Y   G +Y L G Y  ++   D+  +L P++  
Sbjct: 829  LKYLGDFEGALENYNYAINLWHEFAECYSAIGHLYFLVGNYTNSMIFYDRAESLKPDYIY 888

Query: 205  -HVARAQRHFVVHKMIVPGDRERV----EQSLKEFRNFVDTHSNVVEACTLFAQVLVDQE 259
             ++ ++Q +  +      GD E      +++L+   +  + H+N  +    F        
Sbjct: 889  PYIGKSQLYMTL------GDMESAIRYSDKALEISPDDAEVHNNKGKILGYFGM------ 936

Query: 260  DFDGAEEYFNRSIRVDPENASLY--VHRAMLMLQARGNVDEAIKLIEKAISIDKSCMFAY 317
             FD A   F  +I ++   A  Y  +  A LM+    N   AI+   KAI++      AY
Sbjct: 937  -FDEAVSSFLTAIELNDSQAEYYYNLGNAYLMINEFEN---AIESYNKAINLYPEYEAAY 992

Query: 318  ETLGTIEVQRGRLEEAVKCFNKALPLARDEAE 349
              +G  ++    +EEA+K FNKA+ L    AE
Sbjct: 993  VGIGKAQMCLENIEEALKNFNKAIELNPRSAE 1024



 Score = 41.6 bits (96), Expect = 0.98,   Method: Compositional matrix adjust.
 Identities = 71/359 (19%), Positives = 141/359 (39%), Gaps = 46/359 (12%)

Query: 168 PNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQRHFVVHKMIVPGDRERV 227
           P V ++Y +R ++     +YEEA  + D+ + L P F  A  ++  ++ ++       + 
Sbjct: 442 PKVPEAYVERAEVLQFMQRYEEAKEDCDQALVLRPQFGSACYRKSLILCEL------GKY 495

Query: 228 EQSLKEFRNFVDTHSNVVEACTLFAQVLVDQEDFDGAEEYFNRSIRVDPENASLYVHRAM 287
           +++++     +D       A       L +   ++ A EY +  I   P     Y+ +A 
Sbjct: 496 DEAIEILEKLLDDEEFCDIAGYFKGVALKNLGRYEEALEYVDGYITKYPGYREPYLEKAD 555

Query: 288 LMLQARGNVDEAIKLIEKAISIDKSCMFAYETLGTIEVQRGRLEEAVKCFNKALPLARDE 347
           +++ A    ++A++     +  D   + A      +  ++ + EEA+KC   A+ L+ D 
Sbjct: 556 ILI-ALEEYEKAMEACNVLLDRDAEDIGALVKKSGVFFRQDKFEEALKCIEDAMALSLDH 614

Query: 348 AELSHIYSLRDAAIAQMKVCERYNIKKKVSPRSQNITKNEKLAIKQLRENNDIIIRPADK 407
             L                   Y  K ++    +N+ K E+             I   DK
Sbjct: 615 HAL-------------------YYYKAEIL---RNMGKPEE------------AIEFFDK 640

Query: 408 GGKTVVMDKADYTQKMTSILNSNDYEIIPGDPTKTIEESEKYGNLENESGQKHAASDFTK 467
             + V      Y  +  S+    +YE       K I   +KY  +E    + H      K
Sbjct: 641 YIEKVPNHPNPYIGRAKSLYVMREYEKALECCEKAISLDDKY--IEGYYSKAHILLQMDK 698

Query: 468 ---AFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQR 523
                  LD+ +++DP     YY R +++   G +E+AL+ +D  +   P+   A  +R
Sbjct: 699 YKDVLELLDKIKEIDPEFPMFYYDRAEVFKRMGNHEKALQEIDIYLEKFPDDGYAHEKR 757


>gi|124024101|ref|YP_001018408.1| hypothetical protein P9303_24101 [Prochlorococcus marinus str. MIT
           9303]
 gi|123964387|gb|ABM79143.1| Hypothetical protein P9303_24101 [Prochlorococcus marinus str. MIT
           9303]
          Length = 725

 Score = 67.4 bits (163), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 50/187 (26%), Positives = 91/187 (48%), Gaps = 7/187 (3%)

Query: 147 LHAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHV 206
           L    D  +A A   +A +V P+ AD+Y+  G +    G  EEA+ +  K I + P+F  
Sbjct: 220 LKEEGDVEEAIASYRKAIEVKPDFADAYFALGLVMKEEGDVEEAIASYRKAIEVKPDF-- 277

Query: 207 ARAQRHFVVHKMIVPGDRERVEQSLKEFRNFVDTHSNVVEACTLFAQVLVDQEDFDGAEE 266
             A  +F +   +V  +   VE+++  +R  ++   +  +A      V+ ++ D + A  
Sbjct: 278 --ADAYFALG--LVMKEEGDVEEAIASYRKAIEVKPDFADAYFALGLVMKEEGDVEEAIA 333

Query: 267 YFNRSIRVDPENASLYVHRAMLMLQARGNVDEAIKLIEKAISIDKSCMFAYETLGTIEVQ 326
            + ++I V P+ A  Y    ++M +  G+V+EAI    KAI +      AY  LG +  +
Sbjct: 334 SYRKAIEVKPDFADAYFALGLVM-KEEGDVEEAIASYRKAIEVKPDFADAYLNLGNVLKE 392

Query: 327 RGRLEEA 333
            G ++EA
Sbjct: 393 EGEIDEA 399



 Score = 60.8 bits (146), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 44/165 (26%), Positives = 82/165 (49%), Gaps = 7/165 (4%)

Query: 185 GQYEEALRNLDKTIALNPNFHVARAQRHFVVHKMIVPGDRERVEQSLKEFRNFVDTHSNV 244
           G  EEA+ +  K I + P+F    A  +F +   +V  +   VE+++  +R  ++   + 
Sbjct: 224 GDVEEAIASYRKAIEVKPDF----ADAYFALG--LVMKEEGDVEEAIASYRKAIEVKPDF 277

Query: 245 VEACTLFAQVLVDQEDFDGAEEYFNRSIRVDPENASLYVHRAMLMLQARGNVDEAIKLIE 304
            +A      V+ ++ D + A   + ++I V P+ A  Y    ++M +  G+V+EAI    
Sbjct: 278 ADAYFALGLVMKEEGDVEEAIASYRKAIEVKPDFADAYFALGLVM-KEEGDVEEAIASYR 336

Query: 305 KAISIDKSCMFAYETLGTIEVQRGRLEEAVKCFNKALPLARDEAE 349
           KAI +      AY  LG +  + G +EEA+  + KA+ +  D A+
Sbjct: 337 KAIEVKPDFADAYFALGLVMKEEGDVEEAIASYRKAIEVKPDFAD 381



 Score = 54.7 bits (130), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 55/221 (24%), Positives = 95/221 (42%), Gaps = 31/221 (14%)

Query: 146 HLHAASDFTKAFAD---LDEAEKVDPNVADSYYQRGQIYCLFG--------------QYE 188
           H  AA +      D   LDEAE++     D Y     +   +G              QY+
Sbjct: 141 HAGAAGNLGALLTDDGELDEAEQLFVKAVDQYPNNVNLRINYGRLLAEKAEHAAAIMQYQ 200

Query: 189 EALRNLDKTIALNPNFHVARAQRHFVVHKMIVPGDRERVEQSLKEFRNFVDTHSNVVEAC 248
            AL    ++  L+ NF  A  +           GD   VE+++  +R  ++   +  +A 
Sbjct: 201 IALPLAPQSPELHYNFANALKEE----------GD---VEEAIASYRKAIEVKPDFADAY 247

Query: 249 TLFAQVLVDQEDFDGAEEYFNRSIRVDPENASLYVHRAMLMLQARGNVDEAIKLIEKAIS 308
                V+ ++ D + A   + ++I V P+ A  Y    ++M +  G+V+EAI    KAI 
Sbjct: 248 FALGLVMKEEGDVEEAIASYRKAIEVKPDFADAYFALGLVM-KEEGDVEEAIASYRKAIE 306

Query: 309 IDKSCMFAYETLGTIEVQRGRLEEAVKCFNKALPLARDEAE 349
           +      AY  LG +  + G +EEA+  + KA+ +  D A+
Sbjct: 307 VKPDFADAYFALGLVMKEEGDVEEAIASYRKAIEVKPDFAD 347



 Score = 53.5 bits (127), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 65/273 (23%), Positives = 120/273 (43%), Gaps = 30/273 (10%)

Query: 259 EDFDGAEEYFNRSIRVDPENASLYVHRAMLMLQARGNVDEAIKLIEKAISIDKSCMFAYE 318
           +D DGAE  F + + V+P+  +  +H    + + RG   +A++LI+ +I  D+S    + 
Sbjct: 20  KDLDGAEAVFKQILAVNPKEPNA-LHLLGCIYKDRGQHQQAVELIQASIREDESNPIPFF 78

Query: 319 TLGTIEVQRGRLEEAVKCFNKALPLARDEAELSHIYS--LRDAAIAQMKVCERYNIKKKV 376
            LG I    G+ E AV  F +AL   +   E    ++  LR+    + +  + Y    ++
Sbjct: 79  NLGKILAIAGQHENAVGVFQEALKRNQQIPETWFCFANALREIGKTE-EAKQAYRNALQL 137

Query: 377 SPRSQNITKNEKLAI---KQLRENNDIIIRPADKGGKTV---------VMDKADYTQKMT 424
           +P       N    +    +L E   + ++  D+    V         + +KA++   + 
Sbjct: 138 NPAHAGAAGNLGALLTDDGELDEAEQLFVKAVDQYPNNVNLRINYGRLLAEKAEHAAAIM 197

Query: 425 SILNSNDYEI-IPGDPTKTIEESEKYGNLENESGQKHAASDFTKAFADLDEAEKVDPNVA 483
                  Y+I +P  P ++ E    + N   E G      D  +A A   +A +V P+ A
Sbjct: 198 Q------YQIALPLAP-QSPELHYNFANALKEEG------DVEEAIASYRKAIEVKPDFA 244

Query: 484 DSYYQRGQIYCLFGQYEEALRNLDKTIALNPNF 516
           D+Y+  G +    G  EEA+ +  K I + P+F
Sbjct: 245 DAYFALGLVMKEEGDVEEAIASYRKAIEVKPDF 277



 Score = 46.6 bits (109), Expect = 0.038,   Method: Compositional matrix adjust.
 Identities = 50/214 (23%), Positives = 84/214 (39%), Gaps = 49/214 (22%)

Query: 174 YYQRGQIYCLFGQYEEALRNLDKTIALNPN-----FHVARAQRHFVVHKMIVPGDRERVE 228
           ++  G+I  + GQ+E A+    + +  N       F  A A R          G  E  +
Sbjct: 77  FFNLGKILAIAGQHENAVGVFQEALKRNQQIPETWFCFANALREI--------GKTEEAK 128

Query: 229 QSLKEFRNFVDTHSNVVEACTLFAQVLVDQEDFDGAEEYFNRSIRVDPENASLYV----- 283
           Q+   +RN +  +     A      +L D  + D AE+ F +++   P N +L +     
Sbjct: 129 QA---YRNALQLNPAHAGAAGNLGALLTDDGELDEAEQLFVKAVDQYPNNVNLRINYGRL 185

Query: 284 ------HRAMLM----------------------LQARGNVDEAIKLIEKAISIDKSCMF 315
                 H A +M                      L+  G+V+EAI    KAI +      
Sbjct: 186 LAEKAEHAAAIMQYQIALPLAPQSPELHYNFANALKEEGDVEEAIASYRKAIEVKPDFAD 245

Query: 316 AYETLGTIEVQRGRLEEAVKCFNKALPLARDEAE 349
           AY  LG +  + G +EEA+  + KA+ +  D A+
Sbjct: 246 AYFALGLVMKEEGDVEEAIASYRKAIEVKPDFAD 279


>gi|344233807|gb|EGV65677.1| hypothetical protein CANTEDRAFT_118183 [Candida tenuis ATCC 10573]
          Length = 606

 Score = 67.4 bits (163), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 90/371 (24%), Positives = 162/371 (43%), Gaps = 34/371 (9%)

Query: 11  KEEISKRSFFKPSKQFIKTYLKSFPNDPILQPDGLSNGVELTNGDTNESHELDLLSK--- 67
           ++ I  R    PS     ++  +F  +    P+G+S   E + G  N+    D ++K   
Sbjct: 230 EQNIKTRVLDLPSASTTGSFFGAFVTES--NPEGIS---EESTG--NDKLLFDAIAKINS 282

Query: 68  -AKRAFEHEDYLTA---IRHCTEEIESTSSNHTKA-LARLLRATVYIFTSQSTKAIEDLT 122
                +E  D L A     +  E +++ S N  KA +A    AT     +    A  D+ 
Sbjct: 283 NTPEGYEEADKLIAEAVSGYDAEGLKADSDNAAKASIAYEYAATFKFLKNDPLSAAVDIG 342

Query: 123 QLVEDTSVDPKIKVNAHIKRAVVHLHAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYC 182
           + V   S+ P+ +   ++ RA+++   +S +  A  D   A K+D N  D+YY  GQ++ 
Sbjct: 343 KAV---SLKPRSRT--YVIRALINADKSS-YEDARNDFASAAKMDSNAGDAYYHLGQLFY 396

Query: 183 LFGQYEEALRNLDKTIALNPNFHVARAQRHFVVHKMIVPGDRERVEQSLKEFRNFVDTHS 242
           L  + ++A  N +K    NP    A  Q   + +K    GD +  E    E +    T  
Sbjct: 397 LTNELDKAQENFEKAKKANPQNVYAYVQSACITYKN---GDIKEAEDKFTEAKLKFPTSP 453

Query: 243 NVVEACTLFAQVLVDQEDFDGAEEYFNRSIRVDPE------NASLYVHRAMLMLQARGN- 295
              E    + +VL D+ D   A + F  + R+          A   V++A L+ +   N 
Sbjct: 454 ---EIPNYYGEVLSDRGDIQAALKQFETAARLQKALPNYSVGALPLVNKASLISRENFNK 510

Query: 296 VDEAIKLIEKAISIDKSCMFAYETLGTIEVQRGRLEEAVKCFNKALPLARDEAELSHIYS 355
           +DEA +L+ +A  +D     A  +L  +++Q+ +++EA+  F ++  LAR   E     S
Sbjct: 511 LDEAEELLVEACKLDPKSELARISLAQLKLQKEQVDEAIVLFEESSNLARTIEEKVQATS 570

Query: 356 LRDAAIAQMKV 366
             +A   Q ++
Sbjct: 571 FAEATKMQKRI 581


>gi|113475342|ref|YP_721403.1| hypothetical protein Tery_1657, partial [Trichodesmium erythraeum
           IMS101]
 gi|110166390|gb|ABG50930.1| TPR repeat [Trichodesmium erythraeum IMS101]
          Length = 594

 Score = 67.4 bits (163), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 83/367 (22%), Positives = 149/367 (40%), Gaps = 48/367 (13%)

Query: 156 AFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQRHFVV 215
           A  D D A + +P  A++Y QR  +      Y++A+   D+ + LNPN  +A   +    
Sbjct: 130 AIEDADRAIQFEPAYANAYVQRADVDFRLNNYQQAISIYDRGLRLNPNLPLAYYDQGRCF 189

Query: 216 HKMIVPGDRERVEQSLKEFRNFVDTHSNVVEACTLFAQVLVDQEDFDGAEEYFNRSIRVD 275
            ++   G +++ +    E    +   S+          +L   E+   A E F  ++R++
Sbjct: 190 LQL---GKKKQAQDCWHEGLKIIPKTSDDY---NTRGAILSQLEEHSKALEEFQEALRLN 243

Query: 276 PENASLYVHRAMLMLQARGNVDEAIKLIEKAISIDKSCMFAYETLGTIEVQRGRLEEAVK 335
             N   YVHRAM    A GN    +   +KA+S++ +    Y   G    Q G L++A++
Sbjct: 244 NNNIGAYVHRAMAH-SALGNHQAVMDNFDKALSLNSNDADIYGWRGIHFEQTGELKKAIE 302

Query: 336 CFNKALPLARDEAELSHIYSLRDAAIA----QMKVCERYNIKKKVSPRSQNITKNEKLAI 391
            F+KAL +     + + +Y+ R    +    Q +  + +N   +++P   N    + L  
Sbjct: 303 EFDKALQI---NYKYTVVYAERGKCYSWLGNQQEAIKDFNRALEIAPN--NSYAYDALGT 357

Query: 392 KQLRENNDIIIRPADKGGKTVVMDKADYTQKMTSILNSNDYEIIPGDPTKTIEESEKYGN 451
             L  N                 D  +  QK    L  N     P +P         +G 
Sbjct: 358 AYLYLN-----------------DIEEAEQKFKKALKLN-----PNNPLAHCGIGVVFGF 395

Query: 452 LENESGQKHAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIA 511
            E           + +A A   EA  ++P +A  Y   GQ + + G+ +EA+    K + 
Sbjct: 396 KEK----------WEEAIAAYQEALCIEPKLAQGYDGLGQAFFMQGKLDEAIHAYKKALG 445

Query: 512 LNPNFHV 518
           + PNF +
Sbjct: 446 IAPNFTI 452



 Score = 64.3 bits (155), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 52/241 (21%), Positives = 114/241 (47%), Gaps = 12/241 (4%)

Query: 104 RATVYIFTSQSTKAIEDLTQLVEDTSVDPKIKVNAHIKRAVVHLHAASDFTKAFADLDEA 163
           R  +     + +KA+E+  + +   + +    + A++ RA+ H  A  +      + D+A
Sbjct: 219 RGAILSQLEEHSKALEEFQEALRLNNNN----IGAYVHRAMAH-SALGNHQAVMDNFDKA 273

Query: 164 EKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQRHFVVHKMIVPGD 223
             ++ N AD Y  RG  +   G+ ++A+   DK + +N  + V  A+R      +   G+
Sbjct: 274 LSLNSNDADIYGWRGIHFEQTGELKKAIEEFDKALQINYKYTVVYAERGKCYSWL---GN 330

Query: 224 RERVEQSLKEFRNFVDTHSNVVEACTLFAQVLVDQEDFDGAEEYFNRSIRVDPENASLYV 283
           ++   +++K+F   ++   N   A        +   D + AE+ F ++++++P N   + 
Sbjct: 331 QQ---EAIKDFNRALEIAPNNSYAYDALGTAYLYLNDIEEAEQKFKKALKLNPNNPLAHC 387

Query: 284 HRAMLMLQARGNVDEAIKLIEKAISIDKSCMFAYETLGTIEVQRGRLEEAVKCFNKALPL 343
              + +   +   +EAI   ++A+ I+      Y+ LG     +G+L+EA+  + KAL +
Sbjct: 388 GIGV-VFGFKEKWEEAIAAYQEALCIEPKLAQGYDGLGQAFFMQGKLDEAIHAYKKALGI 446

Query: 344 A 344
           A
Sbjct: 447 A 447



 Score = 62.4 bits (150), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 57/253 (22%), Positives = 120/253 (47%), Gaps = 14/253 (5%)

Query: 92  SSNHTKALARLLRATVYIFTSQSTKAIEDLTQLVEDTSVDPKIKVNAHIKRAVVHLHAAS 151
           S N+TKA     R+  Y    + + AIED  + ++    +P    NA+++RA V     +
Sbjct: 107 SPNYTKAYVE--RSAAYTKLGKHSIAIEDADRAIQ---FEPAY-ANAYVQRADVDFRL-N 159

Query: 152 DFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQR 211
           ++ +A +  D   +++PN+  +YY +G+ +   G+ ++A     + + + P        R
Sbjct: 160 NYQQAISIYDRGLRLNPNLPLAYYDQGRCFLQLGKKKQAQDCWHEGLKIIPKTSDDYNTR 219

Query: 212 HFVVHKMIVPGDRERVEQSLKEFRNFVDTHSNVVEACTLFAQVLVDQEDFDGAEEYFNRS 271
             ++ ++      E   ++L+EF+  +  ++N + A    A       +     + F+++
Sbjct: 220 GAILSQL------EEHSKALEEFQEALRLNNNNIGAYVHRAMAHSALGNHQAVMDNFDKA 273

Query: 272 IRVDPENASLYVHRAMLMLQARGNVDEAIKLIEKAISIDKSCMFAYETLGTIEVQRGRLE 331
           + ++  +A +Y  R +   Q  G + +AI+  +KA+ I+      Y   G      G  +
Sbjct: 274 LSLNSNDADIYGWRGIHFEQT-GELKKAIEEFDKALQINYKYTVVYAERGKCYSWLGNQQ 332

Query: 332 EAVKCFNKALPLA 344
           EA+K FN+AL +A
Sbjct: 333 EAIKDFNRALEIA 345



 Score = 56.6 bits (135), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 77/319 (24%), Positives = 135/319 (42%), Gaps = 49/319 (15%)

Query: 222 GDRERVEQSLKEFRNFVDTHSNVVEACTLFAQVLVDQEDFDGAEEYFNRSIRVDPENASL 281
           G   +  Q+L+E  N+   +     A T   +  +  ED D       R+I+ +P  A+ 
Sbjct: 95  GAIAKYNQALQESPNYTKAYVERSAAYTKLGKHSIAIEDAD-------RAIQFEPAYANA 147

Query: 282 YVHRAMLMLQARGNVDEAIKLIEKAISIDKSCMFAYETLGTIEVQRGRLEEAVKCFNKAL 341
           YV RA +  +   N  +AI + ++ + ++ +   AY   G   +Q G+ ++A  C+++ L
Sbjct: 148 YVQRADVDFRLN-NYQQAISIYDRGLRLNPNLPLAYYDQGRCFLQLGKKKQAQDCWHEGL 206

Query: 342 PLARDEAELSHIYSLRDAAIAQM----KVCERYNIKKKVSPRSQNITKNEKLAIKQLREN 397
            +     + S  Y+ R A ++Q+    K  E +    +++  +     +  +A   L   
Sbjct: 207 KII---PKTSDDYNTRGAILSQLEEHSKALEEFQEALRLNNNNIGAYVHRAMAHSAL--- 260

Query: 398 NDIIIRPADKGGKTVVMDKADYTQKMTSILNSNDYEII---------PGDPTKTIEESEK 448
                     G    VMD  D   K  S LNSND +I           G+  K IEE +K
Sbjct: 261 ----------GNHQAVMDNFD---KALS-LNSNDADIYGWRGIHFEQTGELKKAIEEFDK 306

Query: 449 -------YGNLENESGQKHAA-SDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYE 500
                  Y  +  E G+ ++   +  +A  D + A ++ PN + +Y   G  Y      E
Sbjct: 307 ALQINYKYTVVYAERGKCYSWLGNQQEAIKDFNRALEIAPNNSYAYDALGTAYLYLNDIE 366

Query: 501 EALRNLDKTIALNPNFHVA 519
           EA +   K + LNPN  +A
Sbjct: 367 EAEQKFKKALKLNPNNPLA 385



 Score = 55.1 bits (131), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 46/201 (22%), Positives = 92/201 (45%), Gaps = 11/201 (5%)

Query: 145 VHLHAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNF 204
           +H     +  KA  + D+A +++      Y +RG+ Y   G  +EA+++ ++ + + PN 
Sbjct: 289 IHFEQTGELKKAIEEFDKALQINYKYTVVYAERGKCYSWLGNQQEAIKDFNRALEIAPNN 348

Query: 205 HVARAQRHFVVHKMIVPGDRERVEQSLKEFRNFVDTHSNVVEACTLFAQVLVDQEDFDGA 264
             A      +    +   D E  EQ  K+        +N +  C +   V   +E ++ A
Sbjct: 349 SYA---YDALGTAYLYLNDIEEAEQKFKKALKL--NPNNPLAHCGI-GVVFGFKEKWEEA 402

Query: 265 EEYFNRSIRVDPENASLY--VHRAMLMLQARGNVDEAIKLIEKAISIDKSCMFAYETLGT 322
              +  ++ ++P+ A  Y  + +A  M   +G +DEAI   +KA+ I  +    +  LG 
Sbjct: 403 IAAYQEALCIEPKLAQGYDGLGQAFFM---QGKLDEAIHAYKKALGIAPNFTIVHNKLGV 459

Query: 323 IEVQRGRLEEAVKCFNKALPL 343
              Q+ + +EAV  + +A+ L
Sbjct: 460 ALEQQKKEDEAVAAYKEAISL 480



 Score = 51.2 bits (121), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 43/189 (22%), Positives = 86/189 (45%), Gaps = 7/189 (3%)

Query: 155 KAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQRHFV 214
           +A  D + A ++ PN + +Y   G  Y      EEA +   K + LNPN  +A    H  
Sbjct: 333 EAIKDFNRALEIAPNNSYAYDALGTAYLYLNDIEEAEQKFKKALKLNPNNPLA----HCG 388

Query: 215 VHKMIVPGDRERVEQSLKEFRNFVDTHSNVVEACTLFAQVLVDQEDFDGAEEYFNRSIRV 274
           +   +V G +E+ E+++  ++  +     + +      Q    Q   D A   + +++ +
Sbjct: 389 IG--VVFGFKEKWEEAIAAYQEALCIEPKLAQGYDGLGQAFFMQGKLDEAIHAYKKALGI 446

Query: 275 DPENASLYVHRAMLMLQARGNVDEAIKLIEKAISIDKSCMFAYETLGTIEVQRGRLEEAV 334
            P N ++  ++  + L+ +   DEA+   ++AIS+D +   A   LG   +++ R  + +
Sbjct: 447 AP-NFTIVHNKLGVALEQQKKEDEAVAAYKEAISLDPNFATARANLGYALLKQDRTTDGI 505

Query: 335 KCFNKALPL 343
               KA  L
Sbjct: 506 ANLKKARDL 514


>gi|367471704|ref|ZP_09471309.1| exported hypothetical protein; putative tetratricopeptide repeat
           protein [Bradyrhizobium sp. ORS 285]
 gi|365276023|emb|CCD83777.1| exported hypothetical protein; putative tetratricopeptide repeat
           protein [Bradyrhizobium sp. ORS 285]
          Length = 356

 Score = 67.4 bits (163), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 66/282 (23%), Positives = 127/282 (45%), Gaps = 30/282 (10%)

Query: 78  LTAIRHCTEEIESTSSNHTKALARLLRATVYIFTSQSTKAIEDLTQLVE---DTSV---- 130
           ++ +R CT  +    +N   A A LL  ++    SQ + A ++L    +   D ++    
Sbjct: 7   ISLLRGCTA-MARVPANRRLASAALLAVSL----SQVSAAADELANCAQADGDAAISSCS 61

Query: 131 ---------DPKIKVNAHIKRAVVHLHAASDFTKAFADLDEAEKVDPNVADSYYQRGQIY 181
                    +P + V AH+ R   +     ++ +A  D + A  +DPN A ++Y RG I 
Sbjct: 62  SIIDVGEYSNPDL-VRAHLLRGYAY-SVKGNYDRAIKDYNVAIDLDPNNAVAHYNRGTIK 119

Query: 182 CLFGQYEEALRNLDKTIALNPNFHVARAQRHFVVHKMIVPGDRERVEQSLKEFRNFVDTH 241
              G+Y++A+ +  K I L P    A   R F  +     G+ E+ E    + R  ++  
Sbjct: 120 SNIGEYDQAILDYTKAIELKPGLSDAFNNRCFAYN---ANGNYEKAE---ADCRRAIELD 173

Query: 242 SNVVEACTLFAQVLVDQEDFDGAEEYFNRSIRVDPENASLYVHRAMLMLQARGNVDEAIK 301
            N          VL  +++++ + E + R+I++D  N++ ++ R  + ++    +D AI+
Sbjct: 174 PNQANFHLGLGNVLNSKKEYERSLEEYGRAIQLDSSNSNAFLGRCSVNIKLN-KLDLAIR 232

Query: 302 LIEKAISIDKSCMFAYETLGTIEVQRGRLEEAVKCFNKALPL 343
              KAI +  +    +      +   G+LE A+   N+AL L
Sbjct: 233 NCSKAIELQPNNPIGWNNRCWAQAVLGQLEPALSDCNRALDL 274



 Score = 41.6 bits (96), Expect = 1.0,   Method: Compositional matrix adjust.
 Identities = 21/68 (30%), Positives = 35/68 (51%)

Query: 463 SDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQ 522
            ++ +A  D + A  +DPN A ++Y RG I    G+Y++A+ +  K I L P    A   
Sbjct: 89  GNYDRAIKDYNVAIDLDPNNAVAHYNRGTIKSNIGEYDQAILDYTKAIELKPGLSDAFNN 148

Query: 523 RHFVWTST 530
           R F + + 
Sbjct: 149 RCFAYNAN 156


>gi|311270072|ref|XP_003132756.1| PREDICTED: mitochondrial import receptor subunit TOM70-like [Sus
           scrofa]
          Length = 58

 Score = 67.4 bits (163), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 30/54 (55%), Positives = 43/54 (79%)

Query: 320 LGTIEVQRGRLEEAVKCFNKALPLARDEAELSHIYSLRDAAIAQMKVCERYNIK 373
           +GTIEVQRG +E+A+  FNKA+ LA+ E E++H+YSL DAA AQ +V ++Y +K
Sbjct: 1   MGTIEVQRGNMEKAIDMFNKAINLAKSEMEMAHLYSLCDAAHAQTEVAKKYGLK 54


>gi|113478134|ref|YP_724195.1| sulfotransferase [Trichodesmium erythraeum IMS101]
 gi|110169182|gb|ABG53722.1| sulfotransferase [Trichodesmium erythraeum IMS101]
          Length = 676

 Score = 67.4 bits (163), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 53/237 (22%), Positives = 120/237 (50%), Gaps = 15/237 (6%)

Query: 131 DPKIKVNAH-IKRAVVHLHAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEE 189
           +PK  +  H +   ++ L +  +   AF     A + +PN   SYY+ G+      ++ +
Sbjct: 105 NPKASLFYHKLGLVLIQLKSWDEAVSAFC---RAIQFNPNFPWSYYKLGEALTQQKKWHQ 161

Query: 190 ALRNLDKTIALNPNFHVARAQRHFVVHKMIVPGDRERVEQSLKEFRNFVDTHSNVVEACT 249
           A+    ++I + P+  +  + +H + + +I  G   +++Q++  ++  +    ++     
Sbjct: 162 AVIAYQRSIEIKPD--LCWSYQH-LGNALIKQG---KIDQAIAYYQEILQQQPHLDRIHK 215

Query: 250 LFAQVLVDQEDFDGAEEYFNRSIRVDPENASLYVHRAMLMLQARGNVDEAIKLIEKAISI 309
           L A  LV++ + DGA   + ++I+++P+    +V    + L+ +   +EA+ +  +AI +
Sbjct: 216 LLADALVEKGEIDGAIPNYLKAIQLNPDFPWSHVCLWEIFLK-KDQWNEAVIIYRQAIKL 274

Query: 310 DKSCMFAYETLGTIEVQRGRLEEAVKCFNKALPLARDEAELSHIYS-LRDAAIAQMK 365
           + +  + +  LG   V++G LE A+ C+ KA+ +   +  +S IY  L DA + Q K
Sbjct: 275 NPNAFWLWTYLGNALVKQGDLETAITCYQKAISI---QPNISKIYQFLGDAFVQQQK 328



 Score = 48.9 bits (115), Expect = 0.008,   Method: Compositional matrix adjust.
 Identities = 50/234 (21%), Positives = 94/234 (40%), Gaps = 45/234 (19%)

Query: 168 PNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQRHFVVHKMIVPGDRERV 227
           PN A +Y  +G++    G+ E A+ +  + I LNP                         
Sbjct: 38  PNFAPAYNTQGKVLQAMGKIESAIISYRQAIKLNP------------------------- 72

Query: 228 EQSLKEFRNFVDTHSNVVEACTLFAQVLVDQEDFDGAEEYFNRSIRVDPENASLYVHRAM 287
                            +E   +   +LV QE    A   +   I+ +P+ ASL+ H+  
Sbjct: 73  ---------------QQIETYKILGDILVKQEQLSEAIACYETGIKYNPK-ASLFYHKLG 116

Query: 288 LMLQARGNVDEAIKLIEKAISIDKSCMFAYETLGTIEVQRGRLEEAVKCFNKALPLARDE 347
           L+L    + DEA+    +AI  + +  ++Y  LG    Q+ +  +AV  + +++ +  D 
Sbjct: 117 LVLIQLKSWDEAVSAFCRAIQFNPNFPWSYYKLGEALTQQKKWHQAVIAYQRSIEIKPD- 175

Query: 348 AELSHIYS-LRDAAIAQMKVCERYNIKKKVSPRSQNITKNEKLAIKQLRENNDI 400
             L   Y  L +A I Q K+ +     +++  +  ++ +  KL    L E  +I
Sbjct: 176 --LCWSYQHLGNALIKQGKIDQAIAYYQEILQQQPHLDRIHKLLADALVEKGEI 227



 Score = 48.5 bits (114), Expect = 0.009,   Method: Compositional matrix adjust.
 Identities = 39/185 (21%), Positives = 82/185 (44%), Gaps = 7/185 (3%)

Query: 156 AFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQRHFVV 215
           A  +  +A +++P+   S+    +I+    Q+ EA+    + I LNPN   A     ++ 
Sbjct: 230 AIPNYLKAIQLNPDFPWSHVCLWEIFLKKDQWNEAVIIYRQAIKLNPN---AFWLWTYLG 286

Query: 216 HKMIVPGDRERVEQSLKEFRNFVDTHSNVVEACTLFAQVLVDQEDFDGAEEYFNRSIRVD 275
           + ++  GD   +E ++  ++  +    N+ +         V Q+ +D A   + R+I ++
Sbjct: 287 NALVKQGD---LETAITCYQKAISIQPNISKIYQFLGDAFVQQQKWDEAAFAYLRAIEIN 343

Query: 276 PENASLYVHRAMLMLQARGNVDEAIKLIEKAISIDKSCMFAYETLGTIEVQRGRLEEAVK 335
           PE  S   +     L     +D  + L  + I  +     +Y  LG I  ++ ++ EA+ 
Sbjct: 344 PE-LSWSNYHLWNTLDRCHKLDAVVNLYRQFIKKNPDSFLSYLRLGKILTKQNQINEAII 402

Query: 336 CFNKA 340
           C+  A
Sbjct: 403 CYQTA 407


>gi|254526134|ref|ZP_05138186.1| hypothetical protein P9202_786 [Prochlorococcus marinus str. MIT
           9202]
 gi|221537558|gb|EEE40011.1| hypothetical protein P9202_786 [Prochlorococcus marinus str. MIT
           9202]
          Length = 275

 Score = 67.4 bits (163), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 64/243 (26%), Positives = 114/243 (46%), Gaps = 32/243 (13%)

Query: 117 AIEDLTQLVEDTSVDPKIKVNAHIKRAVVHLHAASDFTKAFADLDEAEKVDPNVADSYYQ 176
           AIED T+L+   +++PK + +    R +       DF  A  D   A +++P    +++ 
Sbjct: 48  AIEDFTKLI---AINPKTE-DVFKNRGIAK-DELGDFKGAIEDYTSAIEINPEDHLNFFF 102

Query: 177 RGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQRHFVVHKMIVPGDRERVEQSLKEFRN 236
           RG        YE+AL +L KTI LNP   +A               DR  +++ L + + 
Sbjct: 103 RGNTKYKLNNYEDALEDLTKTIELNPKSSLALY-------------DRAGIKKILNDNKG 149

Query: 237 FVDTHSNVVEACTLFAQVLV-------DQEDFDGAEEYFNRSIRVDPENASLYVHRAMLM 289
            +  +++ +E    FA           D ED+  A E F++ I +DP   ++Y +R    
Sbjct: 150 AIQDYTSAIEINPTFANAYFKRGDLSSDLEDYASAIEDFSKVIVIDPNYQNIYFYRG--- 206

Query: 290 LQARGNVDEAIKLI-EKAISIDKSCMFA--YETLGTIEVQRGRLEEAVKCFNKALPLARD 346
             A+ N+D+    I +  I+I+K+ + +  Y  LG+     G L+ A+K + KA  L  +
Sbjct: 207 -NAKYNLDDNKSAIADYEIAIEKNPVHSDTYFNLGSCRENLGDLKGAIKEWRKAAELGDE 265

Query: 347 EAE 349
           +A+
Sbjct: 266 DAK 268



 Score = 44.3 bits (103), Expect = 0.18,   Method: Compositional matrix adjust.
 Identities = 28/89 (31%), Positives = 46/89 (51%), Gaps = 1/89 (1%)

Query: 430 NDYEIIPGDPTKTIEESEKYG-NLENESGQKHAASDFTKAFADLDEAEKVDPNVADSYYQ 488
           N+YE    D TKTIE + K    L + +G K   +D   A  D   A +++P  A++Y++
Sbjct: 111 NNYEDALEDLTKTIELNPKSSLALYDRAGIKKILNDNKGAIQDYTSAIEINPTFANAYFK 170

Query: 489 RGQIYCLFGQYEEALRNLDKTIALNPNFH 517
           RG +      Y  A+ +  K I ++PN+ 
Sbjct: 171 RGDLSSDLEDYASAIEDFSKVIVIDPNYQ 199


>gi|434388094|ref|YP_007098705.1| TPR repeat-containing protein [Chamaesiphon minutus PCC 6605]
 gi|428019084|gb|AFY95178.1| TPR repeat-containing protein [Chamaesiphon minutus PCC 6605]
          Length = 779

 Score = 67.4 bits (163), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 97/448 (21%), Positives = 167/448 (37%), Gaps = 68/448 (15%)

Query: 126 EDTSVDPKIKVNAHIKRAV---VHLHAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYC 182
           + +  D + ++  H++  V      +   +  +A +  D A  +DP   D+Y  RG    
Sbjct: 267 QHSRADTRTEIARHVQLLVDRGTEFYEVGNCQQALSAYDRAISLDPQCVDAYCGRGNARR 326

Query: 183 LFGQYEEALRNLDKTIALNPNFHVA----------------RAQRHFVVHKMIVPGDRER 226
             G Y  +  +    + L+P+  +A                R    F   K ++P   + 
Sbjct: 327 YMGDYPGSWEDFSTAVELDPDRGIAYIGRALAACFKPQSDYRPNDDFERGKNLLPNPTDA 386

Query: 227 VEQSLKEF--RNFVDTHSNVVE---ACTLFAQVLV----------DQEDFDGAEEYFNRS 271
           +   ++        D +  + +   A +L  ++LV          +  D DGA   F+  
Sbjct: 387 LSYVMRGTAKAQLFDDNGAIADYSTAISLNPRLLVAYNNRGNLRQNLGDMDGALADFSAV 446

Query: 272 IRVDPENASLYVHRAMLMLQARGNVDEAIKLIEKAISIDKSCMFAYETLGTIEVQRGRLE 331
           + +DP +A  Y +RA+L  Q+ G    A+    +A+ I    +  Y  LG    Q G L 
Sbjct: 447 LEIDPHSAIAYNNRAILYTQS-GEFTSAVADYHRALEIQPELVSVYNNLGNNYCQMGELA 505

Query: 332 EAVKCFNKALPLARDEAELSHIYSLRDAAIAQMKVCERYNIKKKVSPRSQNITKNEKLAI 391
            A+  + +AL L   + E +  Y+ R         C      + ++   + I  +  L I
Sbjct: 506 LAIANYTQALEL---DPEFAVAYTNRANVYRIQGDCH-----EALTDYDRAIALDPNLVI 557

Query: 392 KQLRENNDIIIRPADKGGKTVVMDKADYTQKMTSILNSNDYEIIPGDPTKTIEESEKYGN 451
                N  I  R        +    ADYTQ +   LNS  Y                 GN
Sbjct: 558 GYY--NRGICHRQIGNHQAAI----ADYTQTLA--LNSQYY-----------YAYYHRGN 598

Query: 452 LENESGQKHAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIA 511
                G KH       A AD  +    DPN   ++Y R  +       + A+ +L++ IA
Sbjct: 599 ARQYVGDKHG------AIADYTQTIYFDPNHLHAHYNRAIVRSELHDVQGAIEDLERAIA 652

Query: 512 LNPNFHVARAQRHFVWTSTLAELMAFSD 539
           ++P F  A  QR +V +       A +D
Sbjct: 653 ISPTFAQAYYQRGWVLSRNDDHQFALAD 680



 Score = 64.3 bits (155), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 83/417 (19%), Positives = 159/417 (38%), Gaps = 59/417 (14%)

Query: 94  NHTKALARLLRATVYIFTSQSTKAIEDLTQLVEDTSVDPKIKVNAHIKRAVVHLHAASDF 153
           N T AL+ ++R T          AI D +  +   S++P++ V A+  R  +      D 
Sbjct: 382 NPTDALSYVMRGTAKAQLFDDNGAIADYSTAI---SLNPRLLV-AYNNRGNLR-QNLGDM 436

Query: 154 TKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQRHF 213
             A AD     ++DP+ A +Y  R  +Y   G++  A+ +  + + + P           
Sbjct: 437 DGALADFSAVLEIDPHSAIAYNNRAILYTQSGEFTSAVADYHRALEIQPEL--------- 487

Query: 214 VVHKMIVPGDRERVEQSLKEFRNFVDTHSNVVEACTLFAQVLVDQEDFDGAEEYFNRSIR 273
                            +  + N  + +  + E     A               + +++ 
Sbjct: 488 -----------------VSVYNNLGNNYCQMGELALAIAN--------------YTQALE 516

Query: 274 VDPENASLYVHRAMLMLQARGNVDEAIKLIEKAISIDKSCMFAYETLGTIEVQRGRLEEA 333
           +DPE A  Y +RA +  + +G+  EA+   ++AI++D + +  Y   G    Q G  + A
Sbjct: 517 LDPEFAVAYTNRANVY-RIQGDCHEALTDYDRAIALDPNLVIGYYNRGICHRQIGNHQAA 575

Query: 334 VKCFNKALPLARDEAELSHIYSLRDAAIAQMKVCER------YNIKKKVSPRSQNITKNE 387
           +  + + L L        + Y+      A+  V ++      Y       P   +   N 
Sbjct: 576 IADYTQTLAL-----NSQYYYAYYHRGNARQYVGDKHGAIADYTQTIYFDPNHLHAHYNR 630

Query: 388 KLAIKQLRENNDIIIRPADKGGKTVVMDKADYTQKMTSILNSNDYEIIPGDPTKTIEESE 447
            +   +L +    I         +    +A Y Q+   +  ++D++    D  + I+   
Sbjct: 631 AIVRSELHDVQGAIEDLERAIAISPTFAQA-YYQRGWVLSRNDDHQFALADYQRAIDLQP 689

Query: 448 KYGNLENESGQK-HAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEAL 503
            Y +     G   H+  D + A AD   +  +DP  A +YYQRG+IY   G    A+
Sbjct: 690 DYLDAYYYRGYSYHSLGDLSAAIADFSHSISIDPKYAPAYYQRGKIYTQIGDITGAI 746



 Score = 63.2 bits (152), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 64/261 (24%), Positives = 107/261 (40%), Gaps = 34/261 (13%)

Query: 117 AIEDLTQLVEDTSVDPKIKVNAHIKRAVVHLHAASDFTKAFADLDEAEKVDPNVADSYYQ 176
           AI + TQ +E   +DP+  V A+  RA V+     D  +A  D D A  +DPN+   YY 
Sbjct: 507 AIANYTQALE---LDPEFAV-AYTNRANVY-RIQGDCHEALTDYDRAIALDPNLVIGYYN 561

Query: 177 RGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQR------------------------- 211
           RG  +   G ++ A+ +  +T+ALN  ++ A   R                         
Sbjct: 562 RGICHRQIGNHQAAIADYTQTLALNSQYYYAYYHRGNARQYVGDKHGAIADYTQTIYFDP 621

Query: 212 -HFVVH--KMIVPGDRERVEQSLKEFRNFVDTHSNVVEACTLFAQVLVDQEDFDGAEEYF 268
            H   H  + IV  +   V+ ++++    +       +A      VL   +D   A   +
Sbjct: 622 NHLHAHYNRAIVRSELHDVQGAIEDLERAIAISPTFAQAYYQRGWVLSRNDDHQFALADY 681

Query: 269 NRSIRVDPENASLYVHRAMLMLQARGNVDEAIKLIEKAISIDKSCMFAYETLGTIEVQRG 328
            R+I + P+    Y +R      + G++  AI     +ISID     AY   G I  Q G
Sbjct: 682 QRAIDLQPDYLDAYYYRGY-SYHSLGDLSAAIADFSHSISIDPKYAPAYYQRGKIYTQIG 740

Query: 329 RLEEAVKCFNKALPLARDEAE 349
            +  A+  +++A  L  D  +
Sbjct: 741 DITGAIADYHQAANLYLDRGD 761


>gi|443319283|ref|ZP_21048517.1| Flp pilus assembly protein TadD [Leptolyngbya sp. PCC 6406]
 gi|442781110|gb|ELR91216.1| Flp pilus assembly protein TadD [Leptolyngbya sp. PCC 6406]
          Length = 492

 Score = 67.4 bits (163), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 70/290 (24%), Positives = 120/290 (41%), Gaps = 57/290 (19%)

Query: 88  IESTSSNHTKAL--------ARLLRATVYIFTSQSTKAIEDLTQLVEDTSVDPKIKVNAH 139
           IES  +N ++A+        A +LR   Y        AI D T ++E+T    +    AH
Sbjct: 185 IESAIANLSEAIRINPQNLNAYILRGFAYDRAGDYRSAIADFTYVIENT----RASGIAH 240

Query: 140 IKRAVVHLHAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIA 199
           + R V H H   + T A  DL+ A +  P   + YY R  +Y   G+ + A+R+LD+ I 
Sbjct: 241 VGRGVAHYHLG-NLTDAERDLNTAVRYTPGAVEPYYNRSFVYAAQGRPQRAIRDLDEAIN 299

Query: 200 LNPNFHVARAQRHFVVHKMIVPGDRERVEQSLKEFRNFVDTHSNVVEACTLFAQVLVDQE 259
            + +F      R  +                          HS++    +  A +     
Sbjct: 300 RDTSFFAGYLNRGIL--------------------------HSSMGNHGSAIADL----- 328

Query: 260 DFDGAEEYFNRSIRVDPENASLYVHRAMLMLQARGNVDEAIKLIEKAISIDKSCMFAYET 319
                    +R++ ++ ++A  Y +R    L ARGN  EA+    +A+++D +    Y  
Sbjct: 329 ---------SRALELNGDSALAYRYRGDAQL-ARGNEREALLDYSQALALDPNNPELYTL 378

Query: 320 LGTIEVQRGRLEEAVKCFNKALPLARDEAELSHIYSLRDAAIAQMKVCER 369
            G +   RG +  A+  +N+A+ L  D    +  YS R    AQ+   +R
Sbjct: 379 RGKVRFARGDIPGALADYNQAIFLRPD---YTAAYSARGMVYAQVGDSQR 425



 Score = 57.4 bits (137), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 90/408 (22%), Positives = 155/408 (37%), Gaps = 90/408 (22%)

Query: 112 SQSTKAIEDLTQLVEDTSVDPKIKVNAHIKRAVVHLHAASDFTKAFADLDEAEKVDPNVA 171
           SQ  +A E +  L +   +DP +   A++ R   + +   + T+A  D+ EA   DP + 
Sbjct: 112 SQLGRADEAIGSLSQAIRLDPTL-ARAYLLRGTAY-YELGNITQALVDVQEALIHDPELV 169

Query: 172 DSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQRHFVVHKMIVPGDRERVEQSL 231
            +Y  +G +    G  E A+ NL + I +NP    A   R F   +    GD        
Sbjct: 170 SAYLYQGLVDTQIGNIESAIANLSEAIRINPQNLNAYILRGFAYDRA---GD-------- 218

Query: 232 KEFRNFVDTHSNVVEACTLFAQVLVDQ-------EDFDGAEEYFNRSIRVDPENASLYVH 284
             +R+ +   + V+E         V +        +   AE   N ++R  P     Y +
Sbjct: 219 --YRSAIADFTYVIENTRASGIAHVGRGVAHYHLGNLTDAERDLNTAVRYTPGAVEPYYN 276

Query: 285 RAMLMLQARGNVDEAIKLIEKAISIDKSCMFAYETLGTIEVQRGRLEEAVKCFNKALPLA 344
           R+  +  A+G    AI+ +++AI+ D S    Y   G +    G    A+   ++AL L 
Sbjct: 277 RS-FVYAAQGRPQRAIRDLDEAINRDTSFFAGYLNRGILHSSMGNHGSAIADLSRALELN 335

Query: 345 RDEAELSHIYSLRDAAIAQMKVCERYNIKKKVSPRSQNITKNEKLAIKQLRENNDIIIRP 404
            D A L++ Y   DA +A+                      NE+ A+             
Sbjct: 336 GDSA-LAYRYR-GDAQLAR---------------------GNEREALL------------ 360

Query: 405 ADKGGKTVVMDKADYTQKMTSILNSNDYEIIPGDPTKTIEESEKYGNLENESGQKHAASD 464
                        DY+Q +   L+ N+ E+       T+    ++           A  D
Sbjct: 361 -------------DYSQALA--LDPNNPELY------TLRGKVRF-----------ARGD 388

Query: 465 FTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIAL 512
              A AD ++A  + P+   +Y  RG +Y   G  + A  +L   IA+
Sbjct: 389 IPGALADYNQAIFLRPDYTAAYSARGMVYAQVGDSQRAYDDLSLVIAV 436



 Score = 56.2 bits (134), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 73/288 (25%), Positives = 128/288 (44%), Gaps = 27/288 (9%)

Query: 78  LTAIRHCTEEIESTSS----NHTKALARLLRATVYIFTSQSTKAIEDLTQLVEDTSVDPK 133
           L+ +    E I S S     + T A A LLR T Y      T+A+ D+ + +     DP+
Sbjct: 111 LSQLGRADEAIGSLSQAIRLDPTLARAYLLRGTAYYELGNITQALVDVQEALIH---DPE 167

Query: 134 IKVNAHIKRAVVHLHAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRN 193
           + V+A++ + +V      +   A A+L EA +++P   ++Y  RG  Y   G Y  A+ +
Sbjct: 168 L-VSAYLYQGLVDTQIG-NIESAIANLSEAIRINPQNLNAYILRGFAYDRAGDYRSAIAD 225

Query: 194 LDKTIA---LNPNFHVARAQRHFVVHKMIVPGDRER-VEQSLKEFRNFVDTHSNVVEACT 249
               I     +   HV R   H+ +  +    D ER +  +++     V+ + N      
Sbjct: 226 FTYVIENTRASGIAHVGRGVAHYHLGNLT---DAERDLNTAVRYTPGAVEPYYN---RSF 279

Query: 250 LFAQVLVDQEDFDGAEEYFNRSIRVDPENASLYVHRAMLMLQARGNVDEAIKLIEKAISI 309
           ++A     Q      +E  NR    D    + Y++R +L   + GN   AI  + +A+ +
Sbjct: 280 VYAAQGRPQRAIRDLDEAINR----DTSFFAGYLNRGILH-SSMGNHGSAIADLSRALEL 334

Query: 310 DKSCMFAYETLGTIEVQRGRLEEAVKCFNKALPLARDEAELSHIYSLR 357
           +     AY   G  ++ RG   EA+  +++AL L  +  EL   Y+LR
Sbjct: 335 NGDSALAYRYRGDAQLARGNEREALLDYSQALALDPNNPEL---YTLR 379



 Score = 54.7 bits (130), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 64/263 (24%), Positives = 106/263 (40%), Gaps = 36/263 (13%)

Query: 268 FNRSIRVDPENASLYVHRAMLMLQARGNVDEAIKLIEKAISIDKSCMFAYETLGTIEVQR 327
           F+ +I   P+ A+ +++R   + Q  G  DEAI  + +AI +D +   AY   GT   + 
Sbjct: 90  FDAAIVQQPDYAAAFMYRGAALSQL-GRADEAIGSLSQAIRLDPTLARAYLLRGTAYYEL 148

Query: 328 GRLEEAVKCFNKALPLARDEAELSHIYSLRDAAIAQMKVCERYNIKKKVSPRSQNITKNE 387
           G + +A+    +AL     + EL   Y  +     Q+      NI+  ++  S+ I  N 
Sbjct: 149 GNITQALVDVQEALI---HDPELVSAYLYQGLVDTQIG-----NIESAIANLSEAIRINP 200

Query: 388 KLAIKQLRENNDIIIRPADKGGKTVVMDKADYTQKMTSILNSNDYEIIPGDPTKTIEESE 447
           +         N  I+R           D+A             DY     D T  IE + 
Sbjct: 201 Q-------NLNAYILR-------GFAYDRA------------GDYRSAIADFTYVIENTR 234

Query: 448 KYGNLENESGQKHA-ASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNL 506
             G      G  H    + T A  DL+ A +  P   + YY R  +Y   G+ + A+R+L
Sbjct: 235 ASGIAHVGRGVAHYHLGNLTDAERDLNTAVRYTPGAVEPYYNRSFVYAAQGRPQRAIRDL 294

Query: 507 DKTIALNPNFHVARAQRHFVWTS 529
           D+ I  + +F      R  + +S
Sbjct: 295 DEAINRDTSFFAGYLNRGILHSS 317



 Score = 50.1 bits (118), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 62/250 (24%), Positives = 110/250 (44%), Gaps = 22/250 (8%)

Query: 70  RAFEHE---DYLTAIRHCTEEIESTSSNHTKALARLLRATVYIFTSQSTKAIEDLTQLVE 126
           R F ++   DY +AI   T  IE+T ++    +A + R   +      T A  DL   V 
Sbjct: 209 RGFAYDRAGDYRSAIADFTYVIENTRAS---GIAHVGRGVAHYHLGNLTDAERDLNTAVR 265

Query: 127 DT--SVDPKIKVNAHIKRAVVHLHAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLF 184
            T  +V+P      +  R+ V+  A     +A  DLDEA   D +    Y  RG ++   
Sbjct: 266 YTPGAVEP------YYNRSFVY-AAQGRPQRAIRDLDEAINRDTSFFAGYLNRGILHSSM 318

Query: 185 GQYEEALRNLDKTIALNPNFHVARAQRHFVVHKMIVPGDRERVEQSLKEFRNFVDTHSNV 244
           G +  A+ +L + + LN +   A A R+    ++    +RE    +L ++   +    N 
Sbjct: 319 GNHGSAIADLSRALELNGD--SALAYRYRGDAQLARGNERE----ALLDYSQALALDPNN 372

Query: 245 VEACTLFAQVLVDQEDFDGAEEYFNRSIRVDPENASLYVHRAMLMLQARGNVDEAIKLIE 304
            E  TL  +V   + D  GA   +N++I + P+  + Y  R M+  Q  G+   A   + 
Sbjct: 373 PELYTLRGKVRFARGDIPGALADYNQAIFLRPDYTAAYSARGMVYAQV-GDSQRAYDDLS 431

Query: 305 KAISIDKSCM 314
             I++++  +
Sbjct: 432 LVIAVEEGAV 441



 Score = 47.0 bits (110), Expect = 0.028,   Method: Compositional matrix adjust.
 Identities = 45/193 (23%), Positives = 83/193 (43%), Gaps = 11/193 (5%)

Query: 151 SDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQ 210
            ++  A AD D A    P+ A ++  RG      G+ +EA+ +L + I L+P    A   
Sbjct: 81  GEYVNAIADFDAAIVQQPDYAAAFMYRGAALSQLGRADEAIGSLSQAIRLDPTLARAYLL 140

Query: 211 RHFVVHKMIVPGDRERVEQSLKEFRNFVDTHSNVVEACTLFAQVLVDQE--DFDGAEEYF 268
           R    +++        + Q+L + +  +     +V A     Q LVD +  + + A    
Sbjct: 141 RGTAYYEL------GNITQALVDVQEALIHDPELVSA--YLYQGLVDTQIGNIESAIANL 192

Query: 269 NRSIRVDPENASLYVHRAMLMLQARGNVDEAIKLIEKAISIDKSCMFAYETLGTIEVQRG 328
           + +IR++P+N + Y+ R     +A G+   AI      I   ++   A+   G      G
Sbjct: 193 SEAIRINPQNLNAYILRGFAYDRA-GDYRSAIADFTYVIENTRASGIAHVGRGVAHYHLG 251

Query: 329 RLEEAVKCFNKAL 341
            L +A +  N A+
Sbjct: 252 NLTDAERDLNTAV 264



 Score = 44.7 bits (104), Expect = 0.14,   Method: Compositional matrix adjust.
 Identities = 80/392 (20%), Positives = 152/392 (38%), Gaps = 31/392 (7%)

Query: 164 EKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQRHFVVHKMIVPGD 223
           E+V P+  +  Y RG  Y   G+Y  A+ + D  I   P++  A   R   + ++     
Sbjct: 61  EEVPPSPVE-LYNRGVDYFNRGEYVNAIADFDAAIVQQPDYAAAFMYRGAALSQL----- 114

Query: 224 RERVEQSLKEFRNFVDTHSNVVEACTLFAQVLVDQEDFDGAEEYFNRSIRVDPENASLYV 283
             R ++++      +     +  A  L      +  +   A      ++  DPE  S Y+
Sbjct: 115 -GRADEAIGSLSQAIRLDPTLARAYLLRGTAYYELGNITQALVDVQEALIHDPELVSAYL 173

Query: 284 HRAMLMLQARGNVDEAIKLIEKAISIDKSCMFAYETLGTIEVQRGRLEEAVKCFNKALPL 343
           ++ ++  Q  GN++ AI  + +AI I+   + AY   G    + G    A+  F   +  
Sbjct: 174 YQGLVDTQI-GNIESAIANLSEAIRINPQNLNAYILRGFAYDRAGDYRSAIADFTYVIEN 232

Query: 344 ARDEAELSHIYSLRDAA---IAQMKVCER-YNIKKKVSPRSQNITKNEKLAIKQLRENND 399
            R  + ++H+   R  A   +  +   ER  N   + +P +     N    +   +    
Sbjct: 233 TR-ASGIAHV--GRGVAHYHLGNLTDAERDLNTAVRYTPGAVEPYYNRSF-VYAAQGRPQ 288

Query: 400 IIIRPADKGGKTVVMDKADYTQKMTSILNSNDYEIIPGDPTKTIEESEKYGNLENESGQK 459
             IR  D+         A Y  +   IL+S+      G+    I +  +   L  +S   
Sbjct: 289 RAIRDLDEAINRDTSFFAGYLNR--GILHSS-----MGNHGSAIADLSRALELNGDSALA 341

Query: 460 H--------AASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIA 511
           +        A  +  +A  D  +A  +DPN  + Y  RG++    G    AL + ++ I 
Sbjct: 342 YRYRGDAQLARGNEREALLDYSQALALDPNNPELYTLRGKVRFARGDIPGALADYNQAIF 401

Query: 512 LNPNFHVARAQRHFVWTSTLAELMAFSDEFMI 543
           L P++  A + R  V+        A+ D  ++
Sbjct: 402 LRPDYTAAYSARGMVYAQVGDSQRAYDDLSLV 433


>gi|307592015|ref|YP_003899606.1| Tetratricopeptide repeat-containing protein [Cyanothece sp. PCC
           7822]
 gi|306985660|gb|ADN17540.1| Tetratricopeptide TPR_2 repeat protein [Cyanothece sp. PCC 7822]
          Length = 655

 Score = 67.4 bits (163), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 52/210 (24%), Positives = 100/210 (47%), Gaps = 10/210 (4%)

Query: 151 SDFTK---AFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVA 207
           SD  K   A +D ++A  ++P +  +YY RG +Y    +YE AL + DK I LNP     
Sbjct: 445 SDLQKYKLALSDYNKAIALNPLLEQAYYNRGVLYSQLKKYELALSDYDKAIQLNPEDTQV 504

Query: 208 RAQRHFVVHKMIVPGDRERVEQSLKEFRNFVDTHSNVVEACTLFAQVLVDQEDFDGAEEY 267
              R  +   +      +  +++L ++   ++ +S   +A    A V  + +++  A   
Sbjct: 505 YYNRGNLYKTL------KEYDKALFDYNKAIEFNSEDAQAYNNRAVVYKELKEYKKALSD 558

Query: 268 FNRSIRVDPENASLYVHRAMLMLQARGNVDEAIKLIEKAISIDKSCMFAYETLGTIEVQR 327
           +N++I ++P++A  Y +R +L  +     + A+    KAI I+    FAY   G +  Q 
Sbjct: 559 YNKAIEINPDDARTYYNRGILYKELE-EYELALSDYSKAIEINPQLAFAYANRGILYAQT 617

Query: 328 GRLEEAVKCFNKALPLARDEAELSHIYSLR 357
           G  ++A+     A  L R +  ++   ++R
Sbjct: 618 GNKKQAISDLQIAADLFRQQGNVTDYQNIR 647



 Score = 67.4 bits (163), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 90/397 (22%), Positives = 153/397 (38%), Gaps = 83/397 (20%)

Query: 147 LHAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHV 206
           L  +S + +A    D+A +  P  A++YY +G ++    QY EA+ N  K    +P FH 
Sbjct: 309 LWRSSQYNEAIKACDKAIEKQPKSANAYYLKGLLFLYQFQYPEAIINFKKATQFDPKFHQ 368

Query: 207 ARAQRHFVVHKMIVPGDRERVEQSLKEFRNFVDTHSNVVEACTLFAQVLVDQEDFDGAEE 266
           A  Q+ F                                  C L        E +  A  
Sbjct: 369 AWRQQGF----------------------------------CFLML------EQYPDAST 388

Query: 267 YFNRSIRVDPENASLYVHRAMLMLQARGNVDEAIKLIEKAISIDKSCMFAYETLGTIEVQ 326
            + ++I+  P     Y+ +A ++ + + N   A++  ++A+ I K   + Y   G +   
Sbjct: 389 AYQQAIKYAPGEFVYYIEQAGVLKRLK-NYALALEAYKEALKI-KQHPWTYNNRGLLYSD 446

Query: 327 RGRLEEAVKCFNKALPLARDEAELSHIYSLRDAAIAQMKVCER----YNIKKKVSPRSQN 382
             + + A+  +NKA+ L      L   Y  R    +Q+K  E     Y+   +++P    
Sbjct: 447 LQKYKLALSDYNKAIAL---NPLLEQAYYNRGVLYSQLKKYELALSDYDKAIQLNPEDTQ 503

Query: 383 ITKNEKLAIKQLRENNDIIIRPADKGGKTVVMDKADYTQKMTSILNSNDYEIIPGDPTKT 442
           +  N     K L+E                  DKA +        NS D +    +    
Sbjct: 504 VYYNRGNLYKTLKE-----------------YDKALFDYNKAIEFNSEDAQAY-NNRAVV 545

Query: 443 IEESEKYGNLENESGQKHAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEA 502
            +E ++Y         K A SD+ KA        +++P+ A +YY RG +Y    +YE A
Sbjct: 546 YKELKEY---------KKALSDYNKAI-------EINPDDARTYYNRGILYKELEEYELA 589

Query: 503 LRNLDKTIALNPNFHVARAQRHFVWTSTLAELMAFSD 539
           L +  K I +NP    A A R  ++  T  +  A SD
Sbjct: 590 LSDYSKAIEINPQLAFAYANRGILYAQTGNKKQAISD 626



 Score = 53.5 bits (127), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 35/111 (31%), Positives = 58/111 (52%), Gaps = 5/111 (4%)

Query: 104 RATVYIFTSQSTKAIEDLTQLVEDTSVDPKIKVNAHIKRAVVHLHAASDFTKAFADLDEA 163
           R  +Y    +  KA+ D  + +E  S D +    A+  RAVV+     ++ KA +D ++A
Sbjct: 508 RGNLYKTLKEYDKALFDYNKAIEFNSEDAQ----AYNNRAVVY-KELKEYKKALSDYNKA 562

Query: 164 EKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQRHFV 214
            +++P+ A +YY RG +Y    +YE AL +  K I +NP    A A R  +
Sbjct: 563 IEINPDDARTYYNRGILYKELEEYELALSDYSKAIEINPQLAFAYANRGIL 613


>gi|159462574|ref|XP_001689517.1| predicted chloroplast-targeted protein [Chlamydomonas reinhardtii]
 gi|158283505|gb|EDP09255.1| predicted chloroplast-targeted protein [Chlamydomonas reinhardtii]
          Length = 929

 Score = 67.4 bits (163), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 52/211 (24%), Positives = 97/211 (45%), Gaps = 9/211 (4%)

Query: 152 DFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFH---VAR 208
           D   A  D   A +V+P  ADS+ +RGQ     G +E AL +L K I L P F     A+
Sbjct: 216 DLAGAVEDFGVAIEVEPRYADSWKRRGQARSALGDHEGALADLQKAIDLAPLFGGPDSAQ 275

Query: 209 AQRHFVVHKMIVPGDRERVEQSLKEFRNFVDTHSNVVEACTLFAQVLVDQEDFDGAEEYF 268
           ++    V K ++        ++ +E +  V    +  +A  +       Q D       +
Sbjct: 276 SRAECYVEKGMIYQKMRDYRRACRELQQAVKLDGSNAQAWNVLGLCSTSQGDIRDGVRAY 335

Query: 269 NRSIRVDPENASLYVHRAMLMLQARGNVDEAIKLIEKAISI---DKSCMFAYETLGTIEV 325
            +++ ++P+    +V+     L+  G   EA +++ KA+++   D+  +     L  ++ 
Sbjct: 336 EKAVELNPKLKEGWVNMGQ-ALKEEGRTKEAERVLLKALALDPPDQPAVHVLRVLAQMKQ 394

Query: 326 QRGRLEEAVKCFNKALPL--ARDEAELSHIY 354
           Q+G    A+K  ++ALP+  ARDE  +  +Y
Sbjct: 395 QKGEHAAAIKLLDRALPVAEARDEQVIEVLY 425



 Score = 42.0 bits (97), Expect = 0.83,   Method: Compositional matrix adjust.
 Identities = 22/53 (41%), Positives = 28/53 (52%)

Query: 464 DFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNF 516
           D   A  D   A +V+P  ADS+ +RGQ     G +E AL +L K I L P F
Sbjct: 216 DLAGAVEDFGVAIEVEPRYADSWKRRGQARSALGDHEGALADLQKAIDLAPLF 268


>gi|118395433|ref|XP_001030066.1| SLEI family protein [Tetrahymena thermophila]
 gi|89284354|gb|EAR82403.1| SLEI family protein [Tetrahymena thermophila SB210]
          Length = 2397

 Score = 67.4 bits (163), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 112/508 (22%), Positives = 218/508 (42%), Gaps = 62/508 (12%)

Query: 72  FEHEDYLTAIRHCTEEIESTSSNHTKALARLLRATVYIFTSQSTKAIEDLTQLVEDTSVD 131
           F+ ++ L     C +++    +++ +AL  L    ++    Q  +++E L + +E    +
Sbjct: 14  FQKQNLLEEAIECYKKVLEVDASNVEALYNL--GLIHQSKKQHDESLEFLNRAIEK---N 68

Query: 132 PKIKVNAHIKRAVVHLHAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEAL 191
           P   +NA+I +A  +L       +A A L +A ++DP  A ++ + G  Y       +A+
Sbjct: 69  PNY-LNAYICKAENYLQKKM-LDEAVACLQKALEIDPKSAKAHERLGFAYKKQNLTNKAI 126

Query: 192 RNLDKTIALNPNFHVARAQRHFV------------VHKMIVPGDRE-------------- 225
           +   K I ++PNF  A     F              +K I+  D                
Sbjct: 127 QCFKKAIEIDPNFTEAHHNLGFAYESKNMIDQAYDCYKNILNIDPNYVNTYISLARNYYT 186

Query: 226 --RVEQSLKEFRNFVDTHSNVVEACTLFAQVLVDQEDFDGAEEYFNRSIRVDPENASLYV 283
             ++E S+K  +  ++   N VEA      V  +    + A +++ ++I +DP+  +   
Sbjct: 187 DYKIEDSIKYLKKAIEIDQNCVEAYERLGYVYQNTSKKEEAIKHYKKAIEIDPKYFNAQF 246

Query: 284 HRAMLMLQARGNVDEAIKLIEKAISIDKSCMFAYETLGTIEVQRGRLEEAVKCFNKALPL 343
           +  +L  + + + DEA+   +KAI I+     +Y  +G +   +  + EA++ + KAL +
Sbjct: 247 NLGLLYYEEQKD-DEALTYFQKAIEINPKSPDSYNNIGLVYYHKNMITEALEYYKKALDV 305

Query: 344 ARDEAELSHIYSLRDAAIAQMKVCERYN-IKKKVSPRSQNITKNEKLAIKQLRENNDIII 402
                +  H     ++A+A     E+ N I+  +    ++I  N K  +K L    D+ I
Sbjct: 306 DPQYHKAYH-----NSALAY----EKQNLIQNAIESYKKSIEMNPKF-LKSLTNLGDLCI 355

Query: 403 RP--ADKG----GKTVVMD---KADYTQKMTSILNSNDYEIIPGDPTKTIEESEKYGNLE 453
               AD+G     K + +D     D+ Q      + +  E       K IE + +Y N  
Sbjct: 356 EQNLADEGIECFKKIIQIDPYSHYDHFQLAFLYQDKDMNEEAVKTYKKVIELNPEYTNAY 415

Query: 454 NESGQKHAASD-FTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIAL 512
              G  ++    F +A +   +A +VDPN   +YY+  ++Y L G   EA+    K I +
Sbjct: 416 LNLGIIYSDQKMFDEAQSCFKKAIQVDPNYYKAYYRSAEVYELQGNTTEAIECYKKAIEI 475

Query: 513 NPNFHVARAQRHFVWTSTLAELMAFSDE 540
           NP +  +     +V  + L  ++   DE
Sbjct: 476 NPKYTYS-----YVSLAMLQTILKNYDE 498



 Score = 67.0 bits (162), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 42/175 (24%), Positives = 84/175 (48%), Gaps = 11/175 (6%)

Query: 188 EEALRNLDKTIALNPNFHVARAQRHFVVHKMIVPGDRERVEQSLKEFRNFVDTHSNVVEA 247
           +E +    K I ++P  H    Q  F+        D++  E+++K ++  ++ +     A
Sbjct: 361 DEGIECFKKIIQIDPYSHYDHFQLAFLYQ------DKDMNEEAVKTYKKVIELNPEYTNA 414

Query: 248 CTLFAQVLVDQEDFDGAEEYFNRSIRVDPENASLYVHRAMLMLQARGNVDEAIKLIEKAI 307
                 +  DQ+ FD A+  F ++I+VDP     Y +R+  + + +GN  EAI+  +KAI
Sbjct: 415 YLNLGIIYSDQKMFDEAQSCFKKAIQVDPNYYKAY-YRSAEVYELQGNTTEAIECYKKAI 473

Query: 308 SIDKSCMFAYETLGTIEVQRGRLEEAVKCFNKALPLARDEAE----LSHIYSLRD 358
            I+    ++Y +L  ++      +EA+ C+   L +  +       L +IY L++
Sbjct: 474 EINPKYTYSYVSLAMLQTILKNYDEAIACYQNVLAIEENNLSALNNLGYIYYLKN 528



 Score = 61.2 bits (147), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 90/390 (23%), Positives = 165/390 (42%), Gaps = 47/390 (12%)

Query: 174 YYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQRHFVVHKMIVPGDRERVEQSLKE 233
           YY  G  Y      EEAL    KT  +NPN H+    R    +       +    ++ + 
Sbjct: 551 YYNLGATYESKNMLEEALEYYKKTEEMNPN-HITTFIRQGNAY-----SQKNMQSEAFEC 604

Query: 234 FRNFVDTHSNVVEACTLFAQVLVDQEDFDGAEEYFNRSIRVDPENASLYVHRAMLMLQAR 293
           +    D++ + +    LF Q  + +E     E    ++I+++P+    + +   L  QA 
Sbjct: 605 YNKVNDSNLSTLFEDELFVQTNMIKECIKCYE----KTIQLNPKYTQAFCNLGQLN-QAI 659

Query: 294 GNVDEAIKLIEKAISIDKSCMFAYETLGTIEVQRGRLEEAVKCFNKALPL-ARDEAELSH 352
             ++EAI+    AI +D  C+ +Y  LG+I   +G  E+A++CF+KA  + A + A  + 
Sbjct: 660 KQMEEAIRFYLAAIELDPKCIKSYLGLGSIYSAKGINEKALECFSKAEEIDANNAAIFNG 719

Query: 353 IYSLRDAAIAQMKVCERYNIKKKVSPRSQNITKNEKLAIKQLRENNDII--------IRP 404
           I  +     +  +  E +N   +++P  +       L  +Q  +N+  +        I+P
Sbjct: 720 IGFMYYTQKSYDQAIENFNKALEINPNYELAIYYTGLVYQQKNQNDKALECYQKVLQIKP 779

Query: 405 ADKGGKTVVMDKADYTQKMTSILNSNDYEIIPGDPTKTIEESEKYG-NLENESGQKHAAS 463
            DK  K  +       Q+             P    +  ++  KY   L++E        
Sbjct: 780 NDKKAKVRIFQINQKNQQEDK---------TPKTAKEFYQQGYKYYIQLKDE-------- 822

Query: 464 DFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFH--VARA 521
              ++   L +A ++DPN  ++Y + G IY     ++EA+ N  K + +NP+    +   
Sbjct: 823 ---QSIECLQKALELDPNYYEAYDKLGLIYKEKKMFDEAIVNYKKVLEINPDCLDIIKTV 879

Query: 522 QRHFVWTSTLAELMAFSDEFMIPKI--TYY 549
              ++    L E  AF DE  +PK   TYY
Sbjct: 880 MNIYLDRKMLDEAKAFYDE--VPKNLDTYY 907



 Score = 60.1 bits (144), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 50/185 (27%), Positives = 93/185 (50%), Gaps = 13/185 (7%)

Query: 160  LDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPN-FHVARAQRHFVVHKM 218
            L++A ++DPN +++Y + G +     +YEEA+++  K I +NP  F    A  ++ +   
Sbjct: 1616 LNKAIELDPNYSEAYDKLGLVLKANRKYEEAIQSYKKAIEVNPKCFAAMEAVMNYYL--- 1672

Query: 219  IVPGDRERVEQSLKEFRNFVDTHSNVVEACTLFAQVLVDQEDFDGAEEYFNRSIRVDPEN 278
                DR+ + ++ KEF ++V      VE      +V  DQ   D A   + R+I +D + 
Sbjct: 1673 ----DRKMINEA-KEFYDYV---PKCVETHYHLGRVYQDQNMLDEAIGSYQRAIELDSKY 1724

Query: 279  ASLYVHRAMLMLQARGNVDEAIKLIEKAISIDKSCMFAYETLGTIEVQRGRLEEAVKCFN 338
             + Y+      L  +   D+A++  +K + ID     AY  +G +   +   +EA++ FN
Sbjct: 1725 INAYIQLGNAYLD-KPMFDQALETYKKILEIDPQKPVAYNNIGLVYFDQNMNDEALEQFN 1783

Query: 339  KALPL 343
            KAL +
Sbjct: 1784 KALEI 1788



 Score = 58.9 bits (141), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 95/399 (23%), Positives = 172/399 (43%), Gaps = 71/399 (17%)

Query: 155  KAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVAR--AQRH 212
            KA   L +A ++DPN  ++Y + G +Y     ++E++ +  K   LNP F+ A       
Sbjct: 1354 KAIECLKKALEIDPNFYEAYDKLGLVYKEKKMFDESITHYKKAFELNPKFYSAMETVMNM 1413

Query: 213  FVVHKMIVPGDRERVEQSLKEFRNFVDTHSNVVEACTLFAQVLVDQEDFDGAEEYFNRSI 272
            ++  KMI            KE + F +     ++A    A+V  DQ   D +  Y+ + +
Sbjct: 1414 YLDKKMI------------KEAKEFSEQVPKNLDAYYKLAKVYQDQNMLDESIVYYKKVL 1461

Query: 273  RVDPENASLYVHRAMLMLQARGNVDEAIKLIEKAISIDKSCMFAYETLGTIEVQRGRLEE 332
             +D +  + Y+      L  +   D+A++  +K I ID              V +  L+E
Sbjct: 1462 ELDSKYINAYIQLGNAYLD-KPLYDQAMECYQKIIEID----------SKEPVAQNMLDE 1510

Query: 333  AVKCFNKALPLARDEAELSHIYS---LRDAAIAQMKVCERYNIKKKVSPRSQN-ITKNEK 388
            A++ FNKA+  A  E ELS IY+   + +    + K  E YN   +++P  +N +++  K
Sbjct: 1511 ALEQFNKAIE-ADPEYELS-IYNSGLVYEKKHQKDKALECYNRALEINPAHKNTLSRLNK 1568

Query: 389  LAIKQLRENNDIIIRPADKGGKTVVMDKADYTQKMTSILNSNDYEIIPGDPTKTIEESEK 448
            L  K               G +    DK +  Q+  ++  + DY           EE  K
Sbjct: 1569 LKKKT--------------GKQAQGTDKEE--QQEKNLQTAKDY----------YEEGYK 1602

Query: 449  YGNLENESGQKHAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDK 508
            Y    N+           ++   L++A ++DPN +++Y + G +     +YEEA+++  K
Sbjct: 1603 YYTELNDD----------ESIKCLNKAIELDPNYSEAYDKLGLVLKANRKYEEAIQSYKK 1652

Query: 509  TIALNPNFHVAR--AQRHFVWTSTLAELMAFSDEFMIPK 545
             I +NP    A      +++    + E   F D   +PK
Sbjct: 1653 AIEVNPKCFAAMEAVMNYYLDRKMINEAKEFYD--YVPK 1689



 Score = 58.5 bits (140), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 86/423 (20%), Positives = 176/423 (41%), Gaps = 68/423 (16%)

Query: 105  ATVYIFTSQSTKAIEDLTQLVEDTSVDPKIKVNAHIKRAVVHLHAASDFTKAFADLDEAE 164
              +++  ++  +A+E   ++++   ++P+ K  A+    +VH     D  KA    ++A 
Sbjct: 2004 GNLHLGKAEYDQALECYQKIIQ---INPQ-KAVAYNNIGLVHYKQKMD-DKAIEYYNKAL 2058

Query: 165  KVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQRHFVVHKMIVPGDR 224
            ++DPN   SYY  G +Y     +++AL    K + +NP     + ++      +I   + 
Sbjct: 2059 ELDPNYDLSYYNSGLVYEQKKDFDKALECYKKVLKINP-----KDKKTLNRINLIKKNNG 2113

Query: 225  ERVEQSLKEFRNFVDTHSNVVEACTLFAQVLVDQEDFDGAEEYFNRSIRVDPENASLYVH 284
            ++++   KE     D  S   +    +      ++D   AE+Y+N+  +          +
Sbjct: 2114 DKIDNQTKE-----DEVSEPEDYDDDYEDGDEQKKDLQTAEDYYNQGFKY---------Y 2159

Query: 285  RAMLMLQARGNVDEAIKLIEKAISIDKSCMFAYETLGTIEVQRGRLEEAVKCFNKALPLA 344
              M          E IK ++KAI ID     AY+ LG +  +  + EEA++C+ KA+   
Sbjct: 2160 NQM-------KDQECIKCLKKAIEIDPKYSEAYDKLGLVYEENEQFEEAIECYKKAIE-- 2210

Query: 345  RDEAELSHIYSLRDAAIAQMKVCERYNIKKKVSPRSQNITKNEKLAIKQLRENNDIIIRP 404
                 L  I +L    I                  +Q +T+  K     ++++ DI    
Sbjct: 2211 HKPNSLDSISALMTLYI------------------NQKMTEEAKEFYNSVQQSADIYYEL 2252

Query: 405  ADKGGKTVVMDKADYTQKMTSILNSNDYEIIPGDPTKTIEESEKYGNLENESGQKHAASD 464
            A       ++D+A  + K          + I  DP K +    + GN+ ++      A++
Sbjct: 2253 ARVYEDKSMVDEAISSHK----------KAIELDP-KYVNSYIQLGNIYSDKASYEQATE 2301

Query: 465  FTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQRH 524
            + +   +      ++PN   +Y   G IY   G+ ++AL   +K + +NP + ++     
Sbjct: 2302 YYQKILE------IEPNNEIAYNNIGLIYYDQGKNDQALEQYNKALEINPKYELSLYNSG 2355

Query: 525  FVW 527
             V+
Sbjct: 2356 LVY 2358



 Score = 56.2 bits (134), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 85/401 (21%), Positives = 175/401 (43%), Gaps = 63/401 (15%)

Query: 136 VNAHIKRAVVHLHAASD---FTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALR 192
            NA++   +++    SD   F +A +   +A +VDPN   +YY+  ++Y L G   EA+ 
Sbjct: 412 TNAYLNLGIIY----SDQKMFDEAQSCFKKAIQVDPNYYKAYYRSAEVYELQGNTTEAIE 467

Query: 193 NLDKTIALNPNF---HVARAQRHFVVHKMIVPGDRERVEQSLKEFRNFVDTHSNVVEACT 249
              K I +NP +   +V+ A    ++         +  ++++  ++N +    N + A  
Sbjct: 468 CYKKAIEINPKYTYSYVSLAMLQTIL---------KNYDEAIACYQNVLAIEENNLSALN 518

Query: 250 LFAQVLVDQEDFDGAEEYFNRSIRVDPENASLYVHRAMLMLQARGNVDEAIKLIEKAISI 309
               +   +  +D A +YF + +++D  +  +Y +      +++  ++EA++  +K   +
Sbjct: 519 NLGYIYYLKNMYDEALDYFKKRLQLDTTDYLIYYNLGA-TYESKNMLEEALEYYKKTEEM 577

Query: 310 DKSCMFAYETLGTIEVQRGRLEEAVKCFNKALPLARDEAELSHIYSLRDAAIAQMKVCER 369
           + + +  +   G    Q+    EA +C+NK      +++ LS ++   D    Q  +   
Sbjct: 578 NPNHITTFIRQGNAYSQKNMQSEAFECYNKV-----NDSNLSTLF--EDELFVQTNM--- 627

Query: 370 YNIKKKVSPRSQNITKNEKL--AIKQLRENNDIIIRPADKGGKTVVMDKADYTQKMTSIL 427
             IK+ +    + I  N K   A   L + N  I +          M++A     +   L
Sbjct: 628 --IKECIKCYEKTIQLNPKYTQAFCNLGQLNQAIKQ----------MEEA-----IRFYL 670

Query: 428 NSNDYEIIPGDPTKTIEESEKYGNLENESG-QKHAASDFTKAFADLDEAEKVDPNVADSY 486
            +     I  DP K I+     G++ +  G  + A   F+K       AE++D N A  +
Sbjct: 671 AA-----IELDP-KCIKSYLGLGSIYSAKGINEKALECFSK-------AEEIDANNAAIF 717

Query: 487 YQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQRHFVW 527
              G +Y     Y++A+ N +K + +NPN+ +A      V+
Sbjct: 718 NGIGFMYYTQKSYDQAIENFNKALEINPNYELAIYYTGLVY 758



 Score = 53.1 bits (126), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 46/179 (25%), Positives = 84/179 (46%), Gaps = 7/179 (3%)

Query: 165 KVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQRHFVVHKMIVPGDR 224
           ++DP     ++Q   +Y      EEA++   K I LNP +  A       ++  I+  D+
Sbjct: 372 QIDPYSHYDHFQLAFLYQDKDMNEEAVKTYKKVIELNPEYTNA------YLNLGIIYSDQ 425

Query: 225 ERVEQSLKEFRNFVDTHSNVVEACTLFAQVLVDQEDFDGAEEYFNRSIRVDPENASLYVH 284
           +  +++   F+  +    N  +A    A+V   Q +   A E + ++I ++P+    YV 
Sbjct: 426 KMFDEAQSCFKKAIQVDPNYYKAYYRSAEVYELQGNTTEAIECYKKAIEINPKYTYSYVS 485

Query: 285 RAMLMLQARGNVDEAIKLIEKAISIDKSCMFAYETLGTIEVQRGRLEEAVKCFNKALPL 343
            AML    + N DEAI   +  ++I+++ + A   LG I   +   +EA+  F K L L
Sbjct: 486 LAMLQTILK-NYDEAIACYQNVLAIEENNLSALNNLGYIYYLKNMYDEALDYFKKRLQL 543



 Score = 52.0 bits (123), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 49/243 (20%), Positives = 119/243 (48%), Gaps = 20/243 (8%)

Query: 105  ATVYIFTSQSTKAIEDLTQLVEDTSVDPKIKVNAHIKRAVVHLHAASDFTKAFADLDEAE 164
              VY   +Q+ KA+E   +++E   ++P    +   KRA+   + +S+    F  LD+ +
Sbjct: 1800 GLVYERKNQTDKALECYNKVLE---INPTESRSLARKRALQKKNNSSN--NGFDFLDDLQ 1854

Query: 165  K----VDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQRHFVVHKMIV 220
                  + + A+  Y +  +Y +  + ++++  L K I ++PN++ A  +  FV  +   
Sbjct: 1855 NKFGSSNKSTAEQQYSQAFLYYMQMEDDKSIECLKKAIEIDPNYYAAYERLGFVYSQ--- 1911

Query: 221  PGDRERVEQSLKEFRNFVDTHSNVVEACTLFAQVLVDQEDFDGAEEYFNRSIRVDPENAS 280
               +++ +++++ ++  +  +   +E      ++  D+   + A+E+FN+     P+   
Sbjct: 1912 ---QKKFDEAIEFYQKGIKVNPKGMECIRSLVKIYQDKFMVNEAKEFFNQI----PKCLE 1964

Query: 281  LYVHRAMLMLQARGNVDEAIKLIEKAISIDKSCMFAYETLGTIEVQRGRLEEAVKCFNKA 340
             Y   A +  + +   +EAI   +KAI +D   + AY  LG + + +   ++A++C+ K 
Sbjct: 1965 TYYELATIYSECKM-TEEAIDYFQKAIELDPLYINAYIELGNLHLGKAEYDQALECYQKI 2023

Query: 341  LPL 343
            + +
Sbjct: 2024 IQI 2026



 Score = 50.4 bits (119), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 44/202 (21%), Positives = 92/202 (45%), Gaps = 36/202 (17%)

Query: 168  PNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQRHFVVHKMIVPGDRERV 227
            P   D+YY+   +Y     +EE++ N  K + L+PN        H ++  + +  ++   
Sbjct: 900  PKNLDTYYEFADVYKSQNMFEESVTNYKKVLELDPN----DIDAHILLGSLYL--NKPDY 953

Query: 228  EQSLKEFRNFVDTHSNVVEACTLFAQVLVDQEDFDGAEEYFNRSIRVDPENASLYVHRAM 287
            E++L+ ++N ++  S    A      V   Q   D A EYFN+++ V+P+   L ++ + 
Sbjct: 954  EKALECYQNILNIDSKQAVAYNNMGLVYFRQNIDDQALEYFNKALEVNPK-YELSIYNSG 1012

Query: 288  LMLQARGNVDEAIKLIEKAISIDKSCMFAYETLGTIEV---------------------- 325
            L+ + +   D+A++L  + ++I+ +     +TL  +E+                      
Sbjct: 1013 LVYEKKNQKDKALELYNQVLAINPT---EKKTLARMEILKKKEQEQEQKLETAKDYLDQG 1069

Query: 326  ----QRGRLEEAVKCFNKALPL 343
                 + + EE++ C+ KAL L
Sbjct: 1070 FKYYNQMKDEESINCYKKALEL 1091



 Score = 49.7 bits (117), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 71/378 (18%), Positives = 169/378 (44%), Gaps = 56/378 (14%)

Query: 159  DLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQRHFVVHKM 218
            D +E ++ +   A  YY+ G  Y      +E+++ L+K I L+PN+  A  +       +
Sbjct: 1581 DKEEQQEKNLQTAKDYYEEGYKYYTELNDDESIKCLNKAIELDPNYSEAYDKLG-----L 1635

Query: 219  IVPGDRERVEQSLKEFRNFVDTHSNVVEACTLFAQVLVDQEDFDGAEEYFNRSIRVDPEN 278
            ++  +R + E++++ ++  ++ +     A        +D++  + A+E+++      P+ 
Sbjct: 1636 VLKANR-KYEEAIQSYKKAIEVNPKCFAAMEAVMNYYLDRKMINEAKEFYDYV----PKC 1690

Query: 279  ASLYVHRAMLMLQARGNVDEAIKLIEKAISIDKSCMFAYETLGTIEVQRGRLEEAVKCFN 338
               + H   +  Q +  +DEAI   ++AI +D   + AY  LG   + +   ++A++ + 
Sbjct: 1691 VETHYHLGRVY-QDQNMLDEAIGSYQRAIELDSKYINAYIQLGNAYLDKPMFDQALETYK 1749

Query: 339  KAL------PLARDEAELSHI-YSLRDAAIAQMKVCERYNIKKKVSPRSQNITKNEKLAI 391
            K L      P+A +   L +   ++ D A+      E++N   +++P+ +    N  L  
Sbjct: 1750 KILEIDPQKPVAYNNIGLVYFDQNMNDEAL------EQFNKALEINPKYELSLYNSGL-- 1801

Query: 392  KQLRENNDIIIRPADKGGKTVVMDKADYTQKMTSILNSNDYEIIPGDPTKTIEESEKYGN 451
                                 V ++ + T K     N    +++  +PT++   + K   
Sbjct: 1802 ---------------------VYERKNQTDKALECYN----KVLEINPTESRSLARKRA- 1835

Query: 452  LENESGQKHAASDFTKAFADL-DEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTI 510
            L+ ++   +   DF     DL ++    + + A+  Y +  +Y +  + ++++  L K I
Sbjct: 1836 LQKKNNSSNNGFDF---LDDLQNKFGSSNKSTAEQQYSQAFLYYMQMEDDKSIECLKKAI 1892

Query: 511  ALNPNFHVARAQRHFVWT 528
             ++PN++ A  +  FV++
Sbjct: 1893 EIDPNYYAAYERLGFVYS 1910



 Score = 47.0 bits (110), Expect = 0.029,   Method: Compositional matrix adjust.
 Identities = 53/265 (20%), Positives = 118/265 (44%), Gaps = 29/265 (10%)

Query: 84  CTEEIESTSSNHTKALARLLRATVYIFTSQSTKAIEDLTQL-VEDTSVDPKIKVNAHIKR 142
           C E+    +  +T+A   L +       +Q+ K +E+  +  +    +DPK  + +++  
Sbjct: 634 CYEKTIQLNPKYTQAFCNLGQ------LNQAIKQMEEAIRFYLAAIELDPKC-IKSYLGL 686

Query: 143 AVVHLHAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNP 202
             ++  A     KA     +AE++D N A  +   G +Y     Y++A+ N +K + +NP
Sbjct: 687 GSIY-SAKGINEKALECFSKAEEIDANNAAIFNGIGFMYYTQKSYDQAIENFNKALEINP 745

Query: 203 NFHVARAQRHFVVHKMIVPGDRERVEQSLKEFRNFVDTHSNVVEACTLFAQVLVDQEDFD 262
           N+ +A      + +  +V   + + +++L+ ++  +    N  +A     Q+    +  D
Sbjct: 746 NYELA------IYYTGLVYQQKNQNDKALECYQKVLQIKPNDKKAKVRIFQINQKNQQED 799

Query: 263 GAEEYFNRSIRVDPENAS-LYVHRAMLMLQARGNVDEAIKLIEKAISIDKSCMFAYETLG 321
                        P+ A   Y       +Q +   +++I+ ++KA+ +D +   AY+ LG
Sbjct: 800 KT-----------PKTAKEFYQQGYKYYIQLKD--EQSIECLQKALELDPNYYEAYDKLG 846

Query: 322 TIEVQRGRLEEAVKCFNKALPLARD 346
            I  ++   +EA+  + K L +  D
Sbjct: 847 LIYKEKKMFDEAIVNYKKVLEINPD 871



 Score = 45.1 bits (105), Expect = 0.11,   Method: Compositional matrix adjust.
 Identities = 85/397 (21%), Positives = 170/397 (42%), Gaps = 43/397 (10%)

Query: 136  VNAHIKRAVVHLHAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLD 195
            +NA+I+    +L     F +A     +  ++DP    +Y   G +Y      +EAL   +
Sbjct: 1725 INAYIQLGNAYLDKPM-FDQALETYKKILEIDPQKPVAYNNIGLVYFDQNMNDEALEQFN 1783

Query: 196  KTIALNPNFHVARAQRHFVVHKMIVPGDRERVEQSLKEFRNFVDTHSNVVEACTLFAQVL 255
            K + +NP + ++      V  +      + + +++L+ +   ++   N  E+ +L  +  
Sbjct: 1784 KALEINPKYELSLYNSGLVYER------KNQTDKALECYNKVLEI--NPTESRSLARKRA 1835

Query: 256  VDQED------FDGAEEYFNRSIRVDPENASLYVHRAMLMLQARGNVDEAIKLIEKAISI 309
            + +++      FD  ++  N+    +   A     +A L      + D++I+ ++KAI I
Sbjct: 1836 LQKKNNSSNNGFDFLDDLQNKFGSSNKSTAEQQYSQAFLYYMQMED-DKSIECLKKAIEI 1894

Query: 310  DKSCMFAYETLGTIEVQRGRLEEAVKCFNKALPLARDEAE----LSHIYS----LRDAA- 360
            D +   AYE LG +  Q+ + +EA++ + K + +     E    L  IY     + +A  
Sbjct: 1895 DPNYYAAYERLGFVYSQQKKFDEAIEFYQKGIKVNPKGMECIRSLVKIYQDKFMVNEAKE 1954

Query: 361  -IAQMKVC-ERYNIKKKVSPRSQNITKNEKLAIKQLRENNDIIIRPADKGGKTVVMDKAD 418
               Q+  C E Y     +    + +T+      ++  E + + I    + G  + + KA+
Sbjct: 1955 FFNQIPKCLETYYELATIYSECK-MTEEAIDYFQKAIELDPLYINAYIELG-NLHLGKAE 2012

Query: 419  YTQKMTSILNSNDYEIIPGDPTKTIEESEKYGNLENESGQKHAASDF-TKAFADLDEAEK 477
            Y Q +         +II  +P K +     Y N+    G  H       KA    ++A +
Sbjct: 2013 YDQALECYQ-----KIIQINPQKAV----AYNNI----GLVHYKQKMDDKAIEYYNKALE 2059

Query: 478  VDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNP 514
            +DPN   SYY  G +Y     +++AL    K + +NP
Sbjct: 2060 LDPNYDLSYYNSGLVYEQKKDFDKALECYKKVLKINP 2096



 Score = 43.9 bits (102), Expect = 0.21,   Method: Compositional matrix adjust.
 Identities = 75/403 (18%), Positives = 165/403 (40%), Gaps = 50/403 (12%)

Query: 129 SVDPKIKVNAHIKRAVVHLHAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYE 188
           ++DP   VN +I  A  + +       +   L +A ++D N  ++Y + G +Y    + E
Sbjct: 168 NIDPNY-VNTYISLAR-NYYTDYKIEDSIKYLKKAIEIDQNCVEAYERLGYVYQNTSKKE 225

Query: 189 EALRNLDKTIALNPNFHVARAQRHFVVHKMIVPGDRERVEQSLKEFRNFVDTHSNVVEAC 248
           EA+++  K I ++P +  A+     + +      + ++ +++L  F+  ++ +    ++ 
Sbjct: 226 EAIKHYKKAIEIDPKYFNAQFNLGLLYY------EEQKDDEALTYFQKAIEINPKSPDSY 279

Query: 249 TLFAQVLVDQEDFDGAEEYFNRSIRVDPENASLYVHRAMLMLQARGNVDEAIKLIEKAIS 308
                V   +     A EY+ +++ VDP+    Y H + L  + +  +  AI+  +K+I 
Sbjct: 280 NNIGLVYYHKNMITEALEYYKKALDVDPQYHKAY-HNSALAYEKQNLIQNAIESYKKSIE 338

Query: 309 IDKSCMFAYETLGTIEVQRGRLEEAVKCFNKAL---PLAR-DEAELSHIYSLRDAAIAQM 364
           ++   + +   LG + +++   +E ++CF K +   P +  D  +L+ +Y  +D     +
Sbjct: 339 MNPKFLKSLTNLGDLCIEQNLADEGIECFKKIIQIDPYSHYDHFQLAFLYQDKDMNEEAV 398

Query: 365 KVCERYNIKKKVSPRSQNITKNEKLAIKQLRENNDIIIRPADKGGKTVVMDKADYTQKMT 424
           K        KKV   +   T N  L +  +  +  +         K + +D   Y     
Sbjct: 399 KTY------KKVIELNPEYT-NAYLNLGIIYSDQKMFDEAQSCFKKAIQVDPNYYKAYYR 451

Query: 425 SILNSNDYEIIPGDPTKTIEESEKYGNLENESGQKHAASDFTKAFADLDEAEKVDPNVAD 484
           S   +  YE+  G+ T+ IE  +K                          A +++P    
Sbjct: 452 S---AEVYEL-QGNTTEAIECYKK--------------------------AIEINPKYTY 481

Query: 485 SYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQRHFVW 527
           SY     +  +   Y+EA+      +A+  N   A     +++
Sbjct: 482 SYVSLAMLQTILKNYDEAIACYQNVLAIEENNLSALNNLGYIY 524



 Score = 40.0 bits (92), Expect = 2.9,   Method: Compositional matrix adjust.
 Identities = 69/311 (22%), Positives = 133/311 (42%), Gaps = 40/311 (12%)

Query: 61   ELDLLSKAKRAFEH--EDYLTAIRHCTEEIESTSSNHTKALARLLRATVYI--------F 110
            +L LL K  + F+   E+Y  AI     EI     +  KA+  L      I        F
Sbjct: 1101 KLGLLHKTNKKFDEAVENYKKAI-----EINPKCFSAMKAVMNLYLDKKMIKEAQEFCEF 1155

Query: 111  TSQSTKAIEDLTQLVEDTSV--DPKIKVNAHIKRAVVHLHAASDFTKAFAD-------LD 161
              + T+A  +L +  E+ ++  D  +     I+    H+++      ++ D       LD
Sbjct: 1156 VPKCTEAYYELGRTYEEQNMLDDAIVNYKKAIQLDPSHINSYIYLGNSYLDKLQFDLALD 1215

Query: 162  EAEKV---DPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQRHFVVHKM 218
              +K+   DP  A +Y   G +Y   G Y+ AL    K + ++P++ +A      V  K 
Sbjct: 1216 SYKKIIEIDPKKAVAYNNVGVVYNKQGLYDAALEYYKKALDVDPHYELALFNSGLVYEK- 1274

Query: 219  IVPGDRERVEQSLKEFRNFVDTHS------NVVEACTLFAQVLVDQEDFDGAEEYFNRSI 272
               G++++   +L+ F   ++ +       N ++      Q   D ++F   ++ F +  
Sbjct: 1275 --KGEQDK---ALEFFYKTLEINPTEKKSLNRIKVIQQNKQTSKDDKEFSLFKDIFKKDK 1329

Query: 273  RVDPENASLYVHRAMLMLQARGNVDEAIKLIEKAISIDKSCMFAYETLGTIEVQRGRLEE 332
            +     A  Y +      Q + N D+AI+ ++KA+ ID +   AY+ LG +  ++   +E
Sbjct: 1330 KKVLSTADDYYYEGFDYYQQQ-NDDKAIECLKKALEIDPNFYEAYDKLGLVYKEKKMFDE 1388

Query: 333  AVKCFNKALPL 343
            ++  + KA  L
Sbjct: 1389 SITHYKKAFEL 1399


>gi|15678100|ref|NP_275215.1| O-linked GlcNAc transferase [Methanothermobacter thermautotrophicus
           str. Delta H]
 gi|2621106|gb|AAB84576.1| O-linked GlcNAc transferase [Methanothermobacter thermautotrophicus
           str. Delta H]
          Length = 403

 Score = 67.4 bits (163), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 80/347 (23%), Positives = 153/347 (44%), Gaps = 40/347 (11%)

Query: 185 GQYEEALRNLDKTIALNPNFHVARAQRHFVVHKMIVPGDRERVEQSLKEFRNFVDTHSNV 244
           G+Y+EAL+   K +  +PN           + K+      +R E++LK +   +  +  +
Sbjct: 30  GKYKEALKEFRKALKASPNDPEILHYNAMTLLKL------KRPEKALKCYEKILKNNPKL 83

Query: 245 VEACTLFAQVLVDQEDFDGAEEYFNRSIRVDPENASLYVHRAMLMLQARGNVDEAIKLIE 304
            EA      VL + + +D A E + R++++DP++   + ++  L L   G  ++AI+  E
Sbjct: 84  AEAWNNKGVVLKELKRYDEALECYERALQIDPQDDGTWNNKGAL-LDTIGKPEKAIECYE 142

Query: 305 KAISIDKSCMFAYETLGTIEVQRGRLEEAVKCFNKALPLARDEAELSHIYSLRDAAIAQM 364
           KA+ I++    A+   G      G+ EEA++C+ KAL +    AE    +  +     ++
Sbjct: 143 KALEINQKNAKAWYNKGNGLRSLGKYEEALECYEKALQI---NAEFVEAWYNKALIFEEL 199

Query: 365 K----VCERYNIKKKVSPRSQNITKNEKLAIKQLRENNDIIIRPADKGGKTV-VMDKA-D 418
           K      E Y    ++ P+      N+   +       D I +P     K +   +KA +
Sbjct: 200 KRYDEALECYGRALQIDPQDDGTWNNKGALL-------DTIGKPE----KAIECYEKALE 248

Query: 419 YTQKMTSILNSNDYEIIPGDPTKTIEESEKYG-----NLENESGQKHAA------SDFTK 467
             QK     N+    ++  +  +  E  E Y      NLEN+    +          + +
Sbjct: 249 INQKNAKAWNNKG--VVLEELKRYDEALECYEKALEINLENDETWANKGVLLRKLGKYEE 306

Query: 468 AFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNP 514
           A    ++A +++P  AD++  +G I     + EEAL+  +K + LNP
Sbjct: 307 ALECFEKALEINPEFADAWEWKGIILEDLKKPEEALKCYEKALKLNP 353



 Score = 59.7 bits (143), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 43/207 (20%), Positives = 101/207 (48%), Gaps = 7/207 (3%)

Query: 147 LHAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHV 206
           L +   + +A    ++A +++    +++Y +  I+    +Y+EAL    + + ++P    
Sbjct: 162 LRSLGKYEEALECYEKALQINAEFVEAWYNKALIFEELKRYDEALECYGRALQIDPQDDG 221

Query: 207 ARAQRHFVVHKMIVPGDRERVEQSLKEFRNFVDTHSNVVEACTLFAQVLVDQEDFDGAEE 266
               +  ++  +  P      E++++ +   ++ +    +A      VL + + +D A E
Sbjct: 222 TWNNKGALLDTIGKP------EKAIECYEKALEINQKNAKAWNNKGVVLEELKRYDEALE 275

Query: 267 YFNRSIRVDPENASLYVHRAMLMLQARGNVDEAIKLIEKAISIDKSCMFAYETLGTIEVQ 326
            + +++ ++ EN   + ++ +L L+  G  +EA++  EKA+ I+     A+E  G I   
Sbjct: 276 CYEKALEINLENDETWANKGVL-LRKLGKYEEALECFEKALEINPEFADAWEWKGIILED 334

Query: 327 RGRLEEAVKCFNKALPLARDEAELSHI 353
             + EEA+KC+ KAL L   +  L ++
Sbjct: 335 LKKPEEALKCYEKALKLNPQDKTLWYM 361


>gi|304314872|ref|YP_003850019.1| tetratricopeptide repeat domain-containing protein
           [Methanothermobacter marburgensis str. Marburg]
 gi|302588331|gb|ADL58706.1| tetratricopeptide repeat domain-containing protein
           [Methanothermobacter marburgensis str. Marburg]
          Length = 406

 Score = 67.4 bits (163), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 57/248 (22%), Positives = 113/248 (45%), Gaps = 43/248 (17%)

Query: 130 VDPKIKVNAHIKRAVVHLHAASDFTKAFADLDEAEKVDPNVADSYYQRGQI--------- 180
           ++PK    A   +A+V L     + +A    ++A +++P +AD++Y +G +         
Sbjct: 113 INPKY-AGAWNNKALV-LKELGRYDEALECYEKALQINPKLADAWYNKGSVLIYLKKYKK 170

Query: 181 ---------------YCLFGQ----------YEEALRNLDKTIALNPNFHVARAQRHFVV 215
                          Y  +G           YEEAL+  DK + LNP    A   +  V 
Sbjct: 171 ALKCFEKAIELNPKNYRAWGTKGITLHNLKIYEEALKCYDKVLQLNPQDDKAWNNKGLVF 230

Query: 216 HKMIVPGDRERVEQSLKEFRNFVDTHSNVVEACTLFAQVLVDQEDFDGAEEYFNRSIRVD 275
           +++       R ++SL+ +   +  +  + EA      VL +   ++ A E + +++ +D
Sbjct: 231 NEL------GRYDESLECYEKALQINPKLAEAWNNKGVVLSELGRYEEALECYEKALEID 284

Query: 276 PENASLYVHRAMLMLQARGNVDEAIKLIEKAISIDKSCMFAYETLGTIEVQRGRLEEAVK 335
           PE+   + ++  L+L+  G  ++A++  +KA+ I+     A++  G I       EE++K
Sbjct: 285 PEDDKTWNNKG-LVLEELGKYEDALECFQKALEINPEFADAWKWKGIILEDLKEPEESLK 343

Query: 336 CFNKALPL 343
           C+ KAL L
Sbjct: 344 CYKKALKL 351



 Score = 61.6 bits (148), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 71/346 (20%), Positives = 146/346 (42%), Gaps = 48/346 (13%)

Query: 185 GQYEEALRNLDKTIALNPNFHVARAQRHFVVHKMIVPGDRERVEQSLKEFRNFVDTHSNV 244
           G+Y+EAL+   K +   PN          + +  I     +R E++L+ +   +  +  +
Sbjct: 30  GKYKEALKEFRKALKARPN------NPEILHYNAITLLKLKRPEKALECYEKILKNNPKL 83

Query: 245 VEACTLFAQVLVDQEDFDGAEEYFNRSIRVDPENASLYVHRAMLMLQARGNVDEAIKLIE 304
            EA      VL +   +D A E + ++++++P+ A  + ++A L+L+  G  DEA++  E
Sbjct: 84  AEAWNNKGLVLKELGRYDEALECYEKALKINPKYAGAWNNKA-LVLKELGRYDEALECYE 142

Query: 305 KAISIDKSCMFAYETLGTIEVQRGRLEEAVKCFNKALPLARDEAELSHIYSLRDAAIAQM 364
           KA+ I+     A+   G++ +   + ++A+KCF KA+ L          +  +   +  +
Sbjct: 143 KALQINPKLADAWYNKGSVLIYLKKYKKALKCFEKAIELNPKN---YRAWGTKGITLHNL 199

Query: 365 KVCER----YNIKKKVSPRSQNITKNEKLAIKQLRENNDIIIRPADKGGKTVVMDKADYT 420
           K+ E     Y+   +++P+      N+ L   +L                        Y 
Sbjct: 200 KIYEEALKCYDKVLQLNPQDDKAWNNKGLVFNEL----------------------GRYD 237

Query: 421 QKMTSILNSNDYEIIPGDPTKTIEESEKYGNLENESGQKHAASDFTKAFADLDEAEKVDP 480
           + +        YE       K  E     G + +E G+      + +A    ++A ++DP
Sbjct: 238 ESLEC------YEKALQINPKLAEAWNNKGVVLSELGR------YEEALECYEKALEIDP 285

Query: 481 NVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQRHFV 526
               ++  +G +    G+YE+AL    K + +NP F  A   +  +
Sbjct: 286 EDDKTWNNKGLVLEELGKYEDALECFQKALEINPEFADAWKWKGII 331



 Score = 60.5 bits (145), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 45/220 (20%), Positives = 97/220 (44%), Gaps = 39/220 (17%)

Query: 155 KAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQRHFV 214
           KA    ++  K +P +A+++  +G +    G+Y+EAL   +K + +NP +  A   +  V
Sbjct: 68  KALECYEKILKNNPKLAEAWNNKGLVLKELGRYDEALECYEKALKINPKYAGAWNNKALV 127

Query: 215 VHKMIVPGDRERVEQSLKEFRNFVDTHSNVVEACTLFAQVLVDQEDFDGAEEYFNRSIRV 274
           + ++       R +++L+ +   +  +  + +A      VL+  + +  A + F ++I +
Sbjct: 128 LKEL------GRYDEALECYEKALQINPKLADAWYNKGSVLIYLKKYKKALKCFEKAIEL 181

Query: 275 DPENASLYVHRAM---------------------------------LMLQARGNVDEAIK 301
           +P+N   +  + +                                 L+    G  DE+++
Sbjct: 182 NPKNYRAWGTKGITLHNLKIYEEALKCYDKVLQLNPQDDKAWNNKGLVFNELGRYDESLE 241

Query: 302 LIEKAISIDKSCMFAYETLGTIEVQRGRLEEAVKCFNKAL 341
             EKA+ I+     A+   G +  + GR EEA++C+ KAL
Sbjct: 242 CYEKALQINPKLAEAWNNKGVVLSELGRYEEALECYEKAL 281



 Score = 57.0 bits (136), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 39/197 (19%), Positives = 95/197 (48%), Gaps = 7/197 (3%)

Query: 145 VHLHAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNF 204
           + LH    + +A    D+  +++P    ++  +G ++   G+Y+E+L   +K + +NP  
Sbjct: 194 ITLHNLKIYEEALKCYDKVLQLNPQDDKAWNNKGLVFNELGRYDESLECYEKALQINPKL 253

Query: 205 HVARAQRHFVVHKMIVPGDRERVEQSLKEFRNFVDTHSNVVEACTLFAQVLVDQEDFDGA 264
             A   +  V+ ++       R E++L+ +   ++      +       VL +   ++ A
Sbjct: 254 AEAWNNKGVVLSEL------GRYEEALECYEKALEIDPEDDKTWNNKGLVLEELGKYEDA 307

Query: 265 EEYFNRSIRVDPENASLYVHRAMLMLQARGNVDEAIKLIEKAISIDKSCMFAYETLGTIE 324
            E F +++ ++PE A  +  + + +L+     +E++K  +KA+ ++      +   G   
Sbjct: 308 LECFQKALEINPEFADAWKWKGI-ILEDLKEPEESLKCYKKALKLNPQNKTLWYMQGKTL 366

Query: 325 VQRGRLEEAVKCFNKAL 341
            + G+ +EA+KC+ K+L
Sbjct: 367 QKLGKHKEALKCYEKSL 383



 Score = 56.6 bits (135), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 32/150 (21%), Positives = 80/150 (53%), Gaps = 7/150 (4%)

Query: 161 DEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQRHFVVHKMIV 220
           ++A +++P +A+++  +G +    G+YEEAL   +K + ++P        +  V+ ++  
Sbjct: 244 EKALQINPKLAEAWNNKGVVLSELGRYEEALECYEKALEIDPEDDKTWNNKGLVLEEL-- 301

Query: 221 PGDRERVEQSLKEFRNFVDTHSNVVEACTLFAQVLVDQEDFDGAEEYFNRSIRVDPENAS 280
                + E +L+ F+  ++ +    +A      +L D ++ + + + + ++++++P+N +
Sbjct: 302 ----GKYEDALECFQKALEINPEFADAWKWKGIILEDLKEPEESLKCYKKALKLNPQNKT 357

Query: 281 LYVHRAMLMLQARGNVDEAIKLIEKAISID 310
           L+  +    LQ  G   EA+K  EK++ ID
Sbjct: 358 LWYMQGK-TLQKLGKHKEALKCYEKSLKID 386


>gi|158339401|ref|YP_001520578.1| hypothetical protein AM1_6329 [Acaryochloris marina MBIC11017]
 gi|158309642|gb|ABW31259.1| TPR domain protein [Acaryochloris marina MBIC11017]
          Length = 1350

 Score = 67.4 bits (163), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 104/452 (23%), Positives = 188/452 (41%), Gaps = 61/452 (13%)

Query: 104  RATVYIFTSQSTKAIEDLTQLVEDTSVDPKIKVNAHIKRAVVHLHAASDFTKA-FADLDE 162
            RA +Y+   Q   AI D ++ +E   +DP+   N    +     +A  +  KA  AD  +
Sbjct: 819  RANIYLLRQQYENAIADWSKAIE---LDPQ---NPTYFQGRGEAYAGLNQPKAAIADFSQ 872

Query: 163  AEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARA--------QRHFV 214
            A ++ P    SY  RGQ Y    QYE A+ N ++ I  N ++  A A        ++ F 
Sbjct: 873  AIQLAPRDVQSYTGRGQAYQSLQQYEAAIANFNQAIK-NADYPQATAVDNQYIQQKKGFA 931

Query: 215  -VHKMIVPGDRERVEQSLKEFRNFVDTHSN------VVEACT-----LFAQVLVDQEDFD 262
               +  +  + E+ EQ++ +F   ++  SN      +  A T     + A   ++ + +D
Sbjct: 932  YTARGYLHVELEKFEQAIADFTQAIELRSNSDNPNGIPLAKTDNLHNIRAISYINLKQYD 991

Query: 263  GAEEYFNRSIRVDPENASLYVHRAMLMLQARGNVDEAIKLIEKAISIDKSCMFAYETLGT 322
             A   + ++I + P+N    V R  L  Q  G   EA    + A+  +      Y     
Sbjct: 992  KALADYTKAIEIAPQNPKYRVSRGQLY-QKMGREAEATADFQTALKTEPKDSEGYRVRAG 1050

Query: 323  IEVQRGRLEEAVKCFNKALPLA-RDEAELSHIYSLRDAAIAQMKVCERYNIKKKVSPRSQ 381
            I     R  EA+  ++KA+ LA ++    S +YS R    ++++  E+   K   S    
Sbjct: 1051 INKSLKRYSEAISDYSKAIELAPQNGLRTSILYSSRARVHSELQQYEQ--AKTDFS---- 1104

Query: 382  NITKNEKLAIKQLRENNDIIIRPADKGGKTVVMDKADYTQKMTSILNSNDYEIIPGDPTK 441
                              I++ P  +      + +A    +  + LN    E   GD +K
Sbjct: 1105 ----------------QAIVLHPNPRSPYVSELFEA----RGRNFLNWQRLEGAVGDFSK 1144

Query: 442  TIEESEKYGNLENESGQKHA---ASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQ 498
             IE + K  N+   +G+         + +A +D +   +++P  + +Y  R Q +    +
Sbjct: 1145 AIEINSK--NILAYAGRGPIYLETKRYEQALSDFNTIIELNPQASPAYDLRSQTHRRLQR 1202

Query: 499  YEEALRNLDKTIALNPNFHVARAQRHFVWTST 530
            +EEA+ +  K I LNP   VA  +R  ++  T
Sbjct: 1203 FEEAISDASKYIELNPKQPVAYTKRGILYALT 1234



 Score = 55.8 bits (133), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 78/300 (26%), Positives = 120/300 (40%), Gaps = 62/300 (20%)

Query: 73   EHEDYLTAIRHCTEEIE--STSSNHTK-ALARL-----LRATVYIFTSQSTKAIEDLTQL 124
            E E +  AI   T+ IE  S S N     LA+      +RA  YI   Q  KA+ D T+ 
Sbjct: 941  ELEKFEQAIADFTQAIELRSNSDNPNGIPLAKTDNLHNIRAISYINLKQYDKALADYTKA 1000

Query: 125  VEDTSVDPKIKVNAHIKRAVVHLHAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLF 184
            +E    +PK +V+    R  ++     +  +A AD   A K +P  ++ Y  R  I    
Sbjct: 1001 IEIAPQNPKYRVS----RGQLYQKMGRE-AEATADFQTALKTEPKDSEGYRVRAGINKSL 1055

Query: 185  GQYEEALRNLDKTIALNPNFHVARAQRHFVVHKMIVPGDRERVEQSLKEFRNFVDTHSNV 244
             +Y EA+ +  K I L P            +   I+   R RV   L+++          
Sbjct: 1056 KRYSEAISDYSKAIELAPQNG---------LRTSILYSSRARVHSELQQYE--------- 1097

Query: 245  VEACTLFAQVLVDQEDFDGAEEYFNRSIRVDPENASLYVHRAMLMLQARG-------NVD 297
             +A T F+Q +V                 + P   S YV     + +ARG        ++
Sbjct: 1098 -QAKTDFSQAIV-----------------LHPNPRSPYVSE---LFEARGRNFLNWQRLE 1136

Query: 298  EAIKLIEKAISIDKSCMFAYETLGTIEVQRGRLEEAVKCFNKALPLARDEAELSHIYSLR 357
             A+    KAI I+   + AY   G I ++  R E+A+  FN  + L     + S  Y LR
Sbjct: 1137 GAVGDFSKAIEINSKNILAYAGRGPIYLETKRYEQALSDFNTIIEL---NPQASPAYDLR 1193



 Score = 55.5 bits (132), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 95/410 (23%), Positives = 169/410 (41%), Gaps = 50/410 (12%)

Query: 139  HIKRAVVHLHAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTI 198
            +I R VV L     F  + A +++A ++DP +A +Y  RG I+ L  +Y+ AL +  + I
Sbjct: 680  YINRGVV-LMWMDQFEASLATVNQALELDPRLAIAYTNRGVIHQLLRRYDAALADHQQAI 738

Query: 199  ALNPNFHVARAQRHFVVHKM--IVPGDRERVEQSLKEFRNFVDTHSNVVEACTLFAQVLV 256
             L+P       Q  +V   +  +   +R R EQ+L +F+  +          +    V  
Sbjct: 739  QLDP-------QDSYVYSGLGQLYLAER-RFEQALAQFKKGISIDPENTTHYSGQGHVYF 790

Query: 257  DQEDFDGAEEYFNRSIRVDPENASLYVHRAMLMLQARGNVDEAIKLIEKAISIDKSCMFA 316
              + ++ A     ++I+++P   S    RA + L  R   + AI    KAI +D      
Sbjct: 791  GLKRYEDAIAAHTQAIQLEPNLPSHLSSRANIYL-LRQQYENAIADWSKAIELDPQNPTY 849

Query: 317  YETLGTIEVQRGRLEEAVKCFNKALPLA-RD-----------------EAELSHI-YSLR 357
            ++  G       + + A+  F++A+ LA RD                 EA +++   +++
Sbjct: 850  FQGRGEAYAGLNQPKAAIADFSQAIQLAPRDVQSYTGRGQAYQSLQQYEAAIANFNQAIK 909

Query: 358  DAAIAQMKVCERYNIKKK----VSPRSQNITKNEKLAIKQLRENNDIIIRPADKGGKTVV 413
            +A   Q    +   I++K     + R     + EK           I +R        + 
Sbjct: 910  NADYPQATAVDNQYIQQKKGFAYTARGYLHVELEKFEQAIADFTQAIELRSNSDNPNGIP 969

Query: 414  MDKADYTQKMTSI--LNSNDYEIIPGDPTKTIE---ESEKY----GNLENESGQKHAASD 464
            + K D    + +I  +N   Y+    D TK IE   ++ KY    G L  + G++     
Sbjct: 970  LAKTDNLHNIRAISYINLKQYDKALADYTKAIEIAPQNPKYRVSRGQLYQKMGRE----- 1024

Query: 465  FTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNP 514
              +A AD   A K +P  ++ Y  R  I     +Y EA+ +  K I L P
Sbjct: 1025 -AEATADFQTALKTEPKDSEGYRVRAGINKSLKRYSEAISDYSKAIELAP 1073



 Score = 42.0 bits (97), Expect = 0.90,   Method: Compositional matrix adjust.
 Identities = 35/159 (22%), Positives = 73/159 (45%), Gaps = 11/159 (6%)

Query: 117  AIEDLTQLVEDTSVDPKIKVNAHIKRAVVHLHAASDFTKAFADLDEAEKVDPNVADSYYQ 176
            A+ D ++ +E  S +    + A+  R  ++L     + +A +D +   +++P  + +Y  
Sbjct: 1138 AVGDFSKAIEINSKN----ILAYAGRGPIYLET-KRYEQALSDFNTIIELNPQASPAYDL 1192

Query: 177  RGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQRHFVVHKMIVPGDRERVEQSLKEFRN 236
            R Q +    ++EEA+ +  K I LNP   VA  +R       I+       + +LK+F+ 
Sbjct: 1193 RSQTHRRLQRFEEAISDASKYIELNPKQPVAYTKRG------ILYALTNNAQHALKDFKQ 1246

Query: 237  FVDTHSNVVEACTLFAQVLVDQEDFDGAEEYFNRSIRVD 275
             V+     +        +  +QE+ + A   F R++ +D
Sbjct: 1247 AVELDEKAIIPTINMGLIYYEQEERNLAIAQFKRAMELD 1285


>gi|21228450|ref|NP_634372.1| O-linked N-acetylglucosamine transferase [Methanosarcina mazei Go1]
 gi|20906930|gb|AAM32044.1| O-linked N-acetylglucosamine transferase [Methanosarcina mazei Go1]
          Length = 412

 Score = 67.4 bits (163), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 52/207 (25%), Positives = 97/207 (46%), Gaps = 8/207 (3%)

Query: 137 NAHIKRAVVHLHAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDK 196
           NA   +A+ +L  A  + +A    D   K + N  +++  +G      G Y+EA+   DK
Sbjct: 168 NAWYGKAL-NLSQAGRYEEAVDAYDIVLKENSNYKEAWAGKGIALGQMGNYDEAIIAYDK 226

Query: 197 TIALNPNFHVARAQRHFVVHKMIVPGDRERVEQSLKEFRNFVDTHSNVVEACTLFAQVLV 256
            + ++P F  A   +   +  +         +Q+LK +   V+      +A       L 
Sbjct: 227 ALEIDPEFLEAWYYKGVDLDSL------GSFKQALKAYEKAVEIDPENDDAWNNMGIDLE 280

Query: 257 DQEDFDGAEEYFNRSIRVDPENASLYVHRAMLMLQARGNVDEAIKLIEKAISIDKSCMFA 316
           + E +D A   F ++I ++ EN+ ++ ++   + Q +   DEA++   KA+ +D   + A
Sbjct: 281 NLERYDEAINAFEKAIEINSENSDVWYNKGFTLSQVQ-RFDEAVEAYRKAVQLDPEYLEA 339

Query: 317 YETLGTIEVQRGRLEEAVKCFNKALPL 343
           Y +LG +  Q  R EEA+  + KAL L
Sbjct: 340 YSSLGFVLAQLKRFEEALDIYEKALKL 366



 Score = 56.2 bits (134), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 46/206 (22%), Positives = 94/206 (45%), Gaps = 7/206 (3%)

Query: 147 LHAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHV 206
           L +   F +A     EA K++   AD +      Y   G+YE+A+    K + L P++  
Sbjct: 109 LESLGRFEEALKLYQEAVKINSEDADLWNNMAFSYSQIGEYEKAVEAYGKALDLKPDYPN 168

Query: 207 ARAQRHFVVHKMIVPGDRERVEQSLKEFRNFVDTHSNVVEACTLFAQVLVDQEDFDGAEE 266
           A   +   + +        R E+++  +   +  +SN  EA       L    ++D A  
Sbjct: 169 AWYGKALNLSQA------GRYEEAVDAYDIVLKENSNYKEAWAGKGIALGQMGNYDEAII 222

Query: 267 YFNRSIRVDPENASLYVHRAMLMLQARGNVDEAIKLIEKAISIDKSCMFAYETLGTIEVQ 326
            +++++ +DPE    + ++ +  L + G+  +A+K  EKA+ ID     A+  +G     
Sbjct: 223 AYDKALEIDPEFLEAWYYKGV-DLDSLGSFKQALKAYEKAVEIDPENDDAWNNMGIDLEN 281

Query: 327 RGRLEEAVKCFNKALPLARDEAELSH 352
             R +EA+  F KA+ +  + +++ +
Sbjct: 282 LERYDEAINAFEKAIEINSENSDVWY 307



 Score = 42.4 bits (98), Expect = 0.73,   Method: Compositional matrix adjust.
 Identities = 69/292 (23%), Positives = 122/292 (41%), Gaps = 36/292 (12%)

Query: 268 FNRSIRVDPENASLYVHRAMLMLQARGNVDEAIKLIEKAISIDKSCMFAYETLGTIEVQR 327
           F ++I  DP N  L  ++A   L++ G  +EA+KL ++A+ I+      +  +     Q 
Sbjct: 88  FEKAIDKDPGNIYLLNNKAA-ALESLGRFEEALKLYQEAVKINSEDADLWNNMAFSYSQI 146

Query: 328 GRLEEAVKCFNKALPLARD--EAELSHIYSLRDAAIAQMKVCERYNIKKKVSPRSQNITK 385
           G  E+AV+ + KAL L  D   A      +L  A   +  V + Y+I  K +   +    
Sbjct: 147 GEYEKAVEAYGKALDLKPDYPNAWYGKALNLSQAGRYEEAV-DAYDIVLKENSNYKEAWA 205

Query: 386 NEKLAIKQLRENNDIIIRPADKG------------GKTVVMDK-ADYTQKMTSILNSNDY 432
            + +A+ Q+   ++ II   DK              K V +D    + Q + +      Y
Sbjct: 206 GKGIALGQMGNYDEAII-AYDKALEIDPEFLEAWYYKGVDLDSLGSFKQALKA------Y 258

Query: 433 E-IIPGDPTKTIEESEKYGNLENESGQKHAASDFTKAFADLDEAEKVDPNVADSYYQRGQ 491
           E  +  DP      +    +LEN      A + F KA        +++   +D +Y +G 
Sbjct: 259 EKAVEIDPENDDAWNNMGIDLENLERYDEAINAFEKAI-------EINSENSDVWYNKGF 311

Query: 492 IYCLFGQYEEALRNLDKTIALNPNFHVARAQRHFVWTSTLAELMAFSDEFMI 543
                 +++EA+    K + L+P +  A +   FV    LA+L  F +   I
Sbjct: 312 TLSQVQRFDEAVEAYRKAVQLDPEYLEAYSSLGFV----LAQLKRFEEALDI 359



 Score = 40.0 bits (92), Expect = 3.1,   Method: Compositional matrix adjust.
 Identities = 51/222 (22%), Positives = 88/222 (39%), Gaps = 35/222 (15%)

Query: 294 GNVDEAIKLIEKAISIDKSCMFAYETLGTIEVQRGRLEEAVKCFNKALPLARDEAELSHI 353
           G  +EAI   EKAI  D   ++            GR EEA+K + +A+ +  ++A+L + 
Sbjct: 79  GKYNEAIIAFEKAIDKDPGNIYLLNNKAAALESLGRFEEALKLYQEAVKINSEDADLWNN 138

Query: 354 YSLRDAAIAQM-KVCERYNIKKKVSPRSQNITKNEKLAIKQLRENNDIIIRPADKGGKTV 412
            +   + I +  K  E Y     + P   N    + L + Q              G    
Sbjct: 139 MAFSYSQIGEYEKAVEAYGKALDLKPDYPNAWYGKALNLSQ-------------AGRYEE 185

Query: 413 VMDKADYTQKMTSILNSNDYEIIPGDPTKTIEESEKYGNLENESGQKHAASDFTKAFADL 472
            +D  D   K     NSN  E   G   K I      G + N          + +A    
Sbjct: 186 AVDAYDIVLKE----NSNYKEAWAG---KGI----ALGQMGN----------YDEAIIAY 224

Query: 473 DEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNP 514
           D+A ++DP   +++Y +G      G +++AL+  +K + ++P
Sbjct: 225 DKALEIDPEFLEAWYYKGVDLDSLGSFKQALKAYEKAVEIDP 266



 Score = 38.9 bits (89), Expect = 8.0,   Method: Compositional matrix adjust.
 Identities = 63/342 (18%), Positives = 142/342 (41%), Gaps = 24/342 (7%)

Query: 184 FGQYEEALRNLDKTIALNPNFHVARAQRHFVVHKMIVPGDRERVEQSLKEFRNFVDTHSN 243
            G+Y EA+   +K I  +P         + + +K        R E++LK ++  V  +S 
Sbjct: 78  LGKYNEAIIAFEKAIDKDP------GNIYLLNNKAAALESLGRFEEALKLYQEAVKINSE 131

Query: 244 VVEACTLFAQVLVDQEDFDGAEEYFNRSIRVDPENASLYVHRAMLMLQARGNVDEAIKLI 303
             +     A       +++ A E + +++ + P+  + +  +A+ + QA G  +EA+   
Sbjct: 132 DADLWNNMAFSYSQIGEYEKAVEAYGKALDLKPDYPNAWYGKALNLSQA-GRYEEAVDAY 190

Query: 304 EKAISIDKSCMFAYETLGTIEVQRGRLEEAVKCFNKALPLARDEAELSHIYSLRDAAIAQ 363
           +  +  + +   A+   G    Q G  +EA+  ++KAL +  +  E  +   +   ++  
Sbjct: 191 DIVLKENSNYKEAWAGKGIALGQMGNYDEAIIAYDKALEIDPEFLEAWYYKGVDLDSLGS 250

Query: 364 MK-VCERYNIKKKVSPRSQNITKNEKLAIKQLRENNDIIIRPADKGGKTVVMDKADYTQK 422
            K   + Y    ++ P + +   N  + ++ L E  D  I   +K  +    +   +  K
Sbjct: 251 FKQALKAYEKAVEIDPENDDAWNNMGIDLENL-ERYDEAINAFEKAIEINSENSDVWYNK 309

Query: 423 MTSILNSNDYEIIPGDPTKTIEESEKYGNLENESGQKHAASDFT--------KAFADLDE 474
             ++     ++       + +E   K   L+ E  + +++  F         +A    ++
Sbjct: 310 GFTLSQVQRFD-------EAVEAYRKAVQLDPEYLEAYSSLGFVLAQLKRFEEALDIYEK 362

Query: 475 AEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNF 516
           A K+DP  ADS++ +       G+ EEA     K + ++P +
Sbjct: 363 ALKLDPEAADSWFGKAVCLSYLGREEEAEDAYRKAVEIDPRY 404


>gi|113478133|ref|YP_724194.1| sulfotransferase [Trichodesmium erythraeum IMS101]
 gi|110169181|gb|ABG53721.1| sulfotransferase [Trichodesmium erythraeum IMS101]
          Length = 682

 Score = 67.0 bits (162), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 55/241 (22%), Positives = 117/241 (48%), Gaps = 13/241 (5%)

Query: 153 FTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQRH 212
           + KA     +A K++P  +  YY+ GQ      +++EA+ N  K I LN +F  +    H
Sbjct: 16  WEKAVTSYRQAIKLNPTFSWHYYKLGQALTQLQKWDEAITNYQKAIELNSDFPWS---YH 72

Query: 213 FVVHKMIVPGDRERVEQSLKEFRNFVDTHSNVVEACTLFAQVLVDQEDFDGAEEYFNRSI 272
            + + ++    +E+ E+++  + NF+  +S+   A     + L    +FD A   + ++I
Sbjct: 73  HLGNALL---KQEKWEEAVNAYHNFIKLNSDNYWAYHKLGEALFKIGEFDAAIISYQKAI 129

Query: 273 RVDPENASLYVHRAMLMLQARGNVDEAIKLIEKAISIDKSCMFAYETLGTIEVQRGRLEE 332
           +++PE    +   A ++    G ++ A     KAI ++   ++  + LG + +++ RL+E
Sbjct: 130 KINPEIKGTHQKLADILFHI-GQLEAAEIAYRKAIKLNPEVVWYRQCLGDVLLRQKRLDE 188

Query: 333 AVKCFNKALPLARDEAELSHIYSLRDAAIAQMKVCERYNIKKKVSPRSQNITKNEKLAIK 392
           A+  +   L +A+    L+ ++     A AQ+  C+  N+ + ++   Q I    +  I 
Sbjct: 189 AIATY---LEVAKVSHNLTWMHLQLGDAFAQL--CQS-NLDETINYYCQAIKNPNQYPIY 242

Query: 393 Q 393
           Q
Sbjct: 243 Q 243



 Score = 48.1 bits (113), Expect = 0.011,   Method: Compositional matrix adjust.
 Identities = 46/212 (21%), Positives = 98/212 (46%), Gaps = 9/212 (4%)

Query: 173 SYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQRHFVVHKMIVPGDRERVEQSLK 232
           +YY+ G+ +    Q+E+A+ +  + I LNP F    +  ++ + + +     ++ ++++ 
Sbjct: 2   NYYELGEKFLEQQQWEKAVTSYRQAIKLNPTF----SWHYYKLGQALT--QLQKWDEAIT 55

Query: 233 EFRNFVDTHSNVVEACTLFAQVLVDQEDFDGAEEYFNRSIRVDPENASLYVHRAMLMLQA 292
            ++  ++ +S+   +       L+ QE ++ A   ++  I+++ +N   Y H+    L  
Sbjct: 56  NYQKAIELNSDFPWSYHHLGNALLKQEKWEEAVNAYHNFIKLNSDNYWAY-HKLGEALFK 114

Query: 293 RGNVDEAIKLIEKAISIDKSCMFAYETLGTIEVQRGRLEEAVKCFNKALPLARDEAELSH 352
            G  D AI   +KAI I+      ++ L  I    G+LE A   + KA+ L  +      
Sbjct: 115 IGEFDAAIISYQKAIKINPEIKGTHQKLADILFHIGQLEAAEIAYRKAIKLNPEVVWYRQ 174

Query: 353 IYSLRDAAIAQMKVCERYNIKKKVSPRSQNIT 384
              L D  + Q ++ E      +V+  S N+T
Sbjct: 175 --CLGDVLLRQKRLDEAIATYLEVAKVSHNLT 204


>gi|209526966|ref|ZP_03275483.1| TPR repeat-containing protein [Arthrospira maxima CS-328]
 gi|209492568|gb|EDZ92906.1| TPR repeat-containing protein [Arthrospira maxima CS-328]
          Length = 631

 Score = 67.0 bits (162), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 51/225 (22%), Positives = 99/225 (44%), Gaps = 29/225 (12%)

Query: 153 FTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQRH 212
           + +A A  D A +++P++ +++YQ+G       QY +AL   D+ + + P    A   R 
Sbjct: 284 YKQAIAACDRALEINPDLDEAWYQKGNALVRLQQYSQALECYDRALKIQPQRSDAWYNRG 343

Query: 213 FVVHKM---------------IVPGDR-------------ERVEQSLKEFRNFVDTHSNV 244
            V+ ++               I P D              ++ EQ+L  +   +   +N 
Sbjct: 344 NVLVRLKRYSPALEAYNQALKIEPNDYAVWHNRGALLRKFQKYEQALDSYDRAIRLEANH 403

Query: 245 VEACTLFAQVLVDQEDFDGAEEYFNRSIRVDPENASLYVHRAMLMLQARGNVDEAIKLIE 304
            E       VL   + +  A   ++R+I+++P    ++ +R M +        EA+   E
Sbjct: 404 YETWHNRGNVLSQLKRYQEAISSYDRAIQINPGQFDIWANRGMALCHIH-QYSEALSCYE 462

Query: 305 KAISIDKSCMFAYETLGTIEVQRGRLEEAVKCFNKALPLARDEAE 349
           +AIS++      + + G + V+  R EEAV C+++A+ L  D  E
Sbjct: 463 QAISLNSKEPELWISQGGVLVKLARHEEAVICYDRAISLKSDSYE 507



 Score = 64.7 bits (156), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 73/360 (20%), Positives = 158/360 (43%), Gaps = 48/360 (13%)

Query: 168 PNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQRHFVVHKMIVPGDRERV 227
           P +AD + ++G+      QY++A+   D+ + +NP+   A  Q+   + ++      ++ 
Sbjct: 265 PLIADDFLKKGEALINERQYKQAIAACDRALEINPDLDEAWYQKGNALVRL------QQY 318

Query: 228 EQSLKEFRNFVDTHSNVVEACTLFAQVLVDQEDFDGAEEYFNRSIRVDPENASLYVHRAM 287
            Q+L+ +   +       +A      VLV  + +  A E +N++++++P + +++ +R  
Sbjct: 319 SQALECYDRALKIQPQRSDAWYNRGNVLVRLKRYSPALEAYNQALKIEPNDYAVWHNRGA 378

Query: 288 LMLQARGNVDEAIKLIEKAISIDKSCMFAYETLGTIEVQRGRLEEAVKCFNKALPLARDE 347
           L L+     ++A+   ++AI ++ +    +   G +  Q  R +EA+  +++A+ +   +
Sbjct: 379 L-LRKFQKYEQALDSYDRAIRLEANHYETWHNRGNVLSQLKRYQEAISSYDRAIQINPGQ 437

Query: 348 AELSHIYSLRDAAIAQMKVCERYNIKKKVSPRSQNITKNEK---LAIKQLRENNDIIIRP 404
            +   I++ R      M +C  +   + +S   Q I+ N K   L I Q      ++++ 
Sbjct: 438 FD---IWANRG-----MALCHIHQYSEALSCYEQAISLNSKEPELWISQ----GGVLVKL 485

Query: 405 ADKGGKTVVMDKADYTQKMTSILNSNDYEIIPGDPTKTIEESEKYGNLENESGQKHAASD 464
           A      +  D+A         L S+ YE   G            G +        A   
Sbjct: 486 ARHEEAVICYDRA-------ISLKSDSYEAWMGR-----------GEILT------ALKQ 521

Query: 465 FTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQRH 524
           + +A A+ D    + P+   ++ QRG       Q+++A+   D  IAL P+   A + RH
Sbjct: 522 YEQALANWDRVIALQPDAYQAWCQRGICLEKMEQHDDAIACFDTAIALKPDH--AESWRH 579



 Score = 52.0 bits (123), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 42/197 (21%), Positives = 89/197 (45%), Gaps = 13/197 (6%)

Query: 153 FTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALN---PNFHVARA 209
           + +A +  D A +++P   D +  RG   C   QY EAL   ++ I+LN   P   +++ 
Sbjct: 420 YQEAISSYDRAIQINPGQFDIWANRGMALCHIHQYSEALSCYEQAISLNSKEPELWISQG 479

Query: 210 QRHFVVHKMIVPGDRERVEQSLKEFRNFVDTHSNVVEACTLFAQVLVDQEDFDGAEEYFN 269
               V+ K+       R E+++  +   +   S+  EA     ++L   + ++ A   ++
Sbjct: 480 G---VLVKLA------RHEEAVICYDRAISLKSDSYEAWMGRGEILTALKQYEQALANWD 530

Query: 270 RSIRVDPENASLYVHRAMLMLQARGNVDEAIKLIEKAISIDKSCMFAYETLGTIEVQRGR 329
           R I + P+    +  R  + L+     D+AI   + AI++      ++   G +  +  +
Sbjct: 531 RVIALQPDAYQAWCQRG-ICLEKMEQHDDAIACFDTAIALKPDHAESWRHRGALLSRLKK 589

Query: 330 LEEAVKCFNKALPLARD 346
            +EA+    KA+ + +D
Sbjct: 590 YQEAIASLGKAISIQKD 606


>gi|284035302|ref|YP_003385232.1| hypothetical protein Slin_0369 [Spirosoma linguale DSM 74]
 gi|283814595|gb|ADB36433.1| TPR repeat-containing protein [Spirosoma linguale DSM 74]
          Length = 446

 Score = 67.0 bits (162), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 101/416 (24%), Positives = 161/416 (38%), Gaps = 69/416 (16%)

Query: 117 AIEDLTQLVEDTSVDPKIKVNAHIKRAVVHLHAASDFTKAFADLDEAEKVDPNVADSYYQ 176
           AI D  + +E  S D      A++ R V       D   A  D   + +++P+   +YY 
Sbjct: 80  AILDYDKAIELNSKD----AMAYLSRGVSKSRQ-DDHRGALLDFSRSIELNPDDPQAYYN 134

Query: 177 RGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQRHFVVHKMIVPGDRERVEQSLKEFRN 236
           RG       QY+ AL +  K I L P    A A  ++          R    Q L +F  
Sbjct: 135 RGISRSRIDQYQGALTDFSKAIELEP----ANAYSYYA---------RAITRQKLNDFAG 181

Query: 237 FVDTHSNVVEACTLFAQVL-------VDQEDFDGAEEYFNRSIRVDPENASLYVHRAMLM 289
            +   S V+E     AQ         V+  DF GA    N++I + PE+   Y +RA   
Sbjct: 182 SLTDFSKVIEITPKRAQAYAGRGLSKVELNDFTGAITDLNKAIELSPEDGESYFYRAY-- 239

Query: 290 LQARGNVDE---AIKLIEKAISIDKSCMFAYETLGTIEVQRGRLEEAVKCFNKALPLARD 346
             A+G +D+   A+   E+A+++      AY   G    + G  + AV+ FN+A+     
Sbjct: 240 --AKGKLDDYKAALPDYERALALKPDNYRAYYGRGFCRSKLGDQKGAVQDFNQAI----- 292

Query: 347 EAELSHIYSLRDAAIAQMKVCERYNIKKKVSPRSQNITKNEKLAIKQLRENNDIIIRPAD 406
             E++++Y          KV     I + +    +N+ + E+  I +L            
Sbjct: 293 --EINNVY-------VDTKVVYNGRISRAILDNLRNVVQ-ERDKINELS----------- 331

Query: 407 KGGKTVVMDKAD-YTQKMTSILNSNDYEIIPGDPTKTIEESEKYGNLENESGQ-KHAASD 464
                   ++A+ Y  +  S     D +    D  K IE +  Y       G  K A  D
Sbjct: 332 -------AERAEAYFSRGVSKNKQGDSKAAIVDLNKAIELNPAYSEAYFSRGMIKSAQGD 384

Query: 465 FTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKT--IALNPNFHV 518
              A  D + A K+ P  A+ +Y RG I    G       +L K   +  NP + V
Sbjct: 385 QKGALTDCNSAIKLKPGYAEVFYVRGLIKHSLGDENGGCLDLSKAGELGYNPAYKV 440



 Score = 53.9 bits (128), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 71/287 (24%), Positives = 127/287 (44%), Gaps = 23/287 (8%)

Query: 75  EDYLTAIRHCTEEIESTSSNHTKALAR-LLRATVYIFTSQSTKAIEDLTQLVEDTSVDPK 133
           + Y  A+   ++ IE   +N     AR + R  +  F    T    D ++++E   + PK
Sbjct: 143 DQYQGALTDFSKAIELEPANAYSYYARAITRQKLNDFAGSLT----DFSKVIE---ITPK 195

Query: 134 IKVNAHIKRAVVHLHAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRN 193
            +  A+  R +  +   +DFT A  DL++A ++ P   +SY+ R         Y+ AL +
Sbjct: 196 -RAQAYAGRGLSKVEL-NDFTGAITDLNKAIELSPEDGESYFYRAYAKGKLDDYKAALPD 253

Query: 194 LDKTIALNPNFHVARAQRHFVVHKMIVPGDRERVEQSLK---EFRN-FVDTHSNVVEACT 249
            ++ +AL P+ + A   R F   K+   GD++   Q      E  N +VDT   VV    
Sbjct: 254 YERALALKPDNYRAYYGRGFCRSKL---GDQKGAVQDFNQAIEINNVYVDTK--VVYNGR 308

Query: 250 LFAQVLVDQEDFDGAEEYFNRSIRVDPENASLYVHRAMLMLQARGNVDEAIKLIEKAISI 309
           +   +L +  +     +  N    +  E A  Y  R +     +G+   AI  + KAI +
Sbjct: 309 ISRAILDNLRNVVQERDKIN---ELSAERAEAYFSRGVSK-NKQGDSKAAIVDLNKAIEL 364

Query: 310 DKSCMFAYETLGTIEVQRGRLEEAVKCFNKALPLARDEAELSHIYSL 356
           + +   AY + G I+  +G  + A+   N A+ L    AE+ ++  L
Sbjct: 365 NPAYSEAYFSRGMIKSAQGDQKGALTDCNSAIKLKPGYAEVFYVRGL 411



 Score = 52.0 bits (123), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 86/390 (22%), Positives = 155/390 (39%), Gaps = 40/390 (10%)

Query: 145 VHLHAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNF 204
           ++   +SDFT A      A  ++P  A SYY RG        +  A+ + DK I LN   
Sbjct: 35  INRSKSSDFTGALQAFSMAITMNPENAPSYYNRGLAKANLKDHRGAILDYDKAIELNSKD 94

Query: 205 HVARAQRHFVVHKMIVPGDRERVEQSLKEFRNFVDTHSNVVEAC--TLFAQVLVDQEDFD 262
            +A   R     +     D  R   +L +F   ++ + +  +A      ++  +DQ  + 
Sbjct: 95  AMAYLSRGVSKSRQ----DDHR--GALLDFSRSIELNPDDPQAYYNRGISRSRIDQ--YQ 146

Query: 263 GAEEYFNRSIRVDPENASLYVHRAMLMLQARGNVDEAIKLIEKAISIDKSCMFAYETLGT 322
           GA   F+++I ++P NA  Y  RA +  Q   +   ++    K I I      AY   G 
Sbjct: 147 GALTDFSKAIELEPANAYSYYARA-ITRQKLNDFAGSLTDFSKVIEITPKRAQAYAGRGL 205

Query: 323 IEVQRGRLEEAVKCFNKALPLARDEAELSHIYSLRDAAIAQMKV------CERYNIKKKV 376
            +V+      A+   NKA+ L+ ++ E S+ Y     A A+ K+         Y     +
Sbjct: 206 SKVELNDFTGAITDLNKAIELSPEDGE-SYFYR----AYAKGKLDDYKAALPDYERALAL 260

Query: 377 SPRSQNITKNEKLAIKQLRENNDII--IRPADKGGKTVVMDKADYTQKMTSILNSNDYEI 434
            P +            +L +    +     A +     V  K  Y  +++  +  N   +
Sbjct: 261 KPDNYRAYYGRGFCRSKLGDQKGAVQDFNQAIEINNVYVDTKVVYNGRISRAILDNLRNV 320

Query: 435 IPGDPTKTIEESEKYGNLENESGQ--------KHAASDFTKAFADLDEAEKVDPNVADSY 486
                   ++E +K   L  E  +        K+   D   A  DL++A +++P  +++Y
Sbjct: 321 --------VQERDKINELSAERAEAYFSRGVSKNKQGDSKAAIVDLNKAIELNPAYSEAY 372

Query: 487 YQRGQIYCLFGQYEEALRNLDKTIALNPNF 516
           + RG I    G  + AL + +  I L P +
Sbjct: 373 FSRGMIKSAQGDQKGALTDCNSAIKLKPGY 402



 Score = 47.8 bits (112), Expect = 0.015,   Method: Compositional matrix adjust.
 Identities = 63/273 (23%), Positives = 114/273 (41%), Gaps = 42/273 (15%)

Query: 260 DFDGAEEYFNRSIRVDPENASLYVHRAMLMLQARGNVDE---AIKLIEKAISIDKSCMFA 316
           DF GA + F+ +I ++PENA  Y +R +    A+ N+ +   AI   +KAI ++     A
Sbjct: 42  DFTGALQAFSMAITMNPENAPSYYNRGL----AKANLKDHRGAILDYDKAIELNSKDAMA 97

Query: 317 YETLGTIEVQRGRLEEAVKCFNKALPLARDEAELSHIYSLRDAAIAQMKVCERYNIKKKV 376
           Y + G  + ++     A+  F++++ L  D+ +  +   +  + I Q +           
Sbjct: 98  YLSRGVSKSRQDDHRGALLDFSRSIELNPDDPQAYYNRGISRSRIDQYQGA--------- 148

Query: 377 SPRSQNITKNEKLAIKQLRENNDIIIRPADKGGKTVVMDKADYTQKMTSILNSNDYEIIP 436
                 +T   K           I + PA+            Y  +  +    ND+    
Sbjct: 149 ------LTDFSKA----------IELEPANA---------YSYYARAITRQKLNDFAGSL 183

Query: 437 GDPTKTIEESEKYGNLENESG-QKHAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCL 495
            D +K IE + K        G  K   +DFT A  DL++A ++ P   +SY+ R      
Sbjct: 184 TDFSKVIEITPKRAQAYAGRGLSKVELNDFTGAITDLNKAIELSPEDGESYFYRAYAKGK 243

Query: 496 FGQYEEALRNLDKTIALNPNFHVARAQRHFVWT 528
              Y+ AL + ++ +AL P+ + A   R F  +
Sbjct: 244 LDDYKAALPDYERALALKPDNYRAYYGRGFCRS 276


>gi|88602105|ref|YP_502283.1| tetratricopeptide TPR_2 [Methanospirillum hungatei JF-1]
 gi|88187567|gb|ABD40564.1| Tetratricopeptide TPR_2 [Methanospirillum hungatei JF-1]
          Length = 452

 Score = 67.0 bits (162), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 80/416 (19%), Positives = 177/416 (42%), Gaps = 44/416 (10%)

Query: 119 EDLTQLVEDTSVDPKIKVNAHI------------KRAVVHLHAASDFTKAFADLDEAEKV 166
           ED  Q V+  +++  IK N ++             RA+++ +    + +A    ++  K+
Sbjct: 20  EDTNQTVDTITLEDLIKENDYVLSLNPQNLTALQYRALIY-YNEEKYPEAINTSEQCLKI 78

Query: 167 DPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQRHFVVHKMIVPGDRER 226
           DP  + +++  G  +    Q ++A+      + LNP+  +    +   + +        +
Sbjct: 79  DPTCSFAWHIIGSSWGYLNQPDKAVEAFQNVVTLNPDDPIQYNVQGVALSRT------GK 132

Query: 227 VEQSLKEFRNFVDTHSNVVEACTLFAQVLVDQEDFDGAEEYFNRSIRVDPENASLYVHRA 286
             ++++ F+   + +S    A         + +++D A   F+++I + P+    Y ++ 
Sbjct: 133 FTEAIQAFQKATNLNSGYAAAWNNMGVTYFNMKEYDKANSAFDKAISLKPDEPEFYANKG 192

Query: 287 MLMLQARGNVDEAIKLIEKAISIDKSCMFAYETLGTIEVQRGRLEEAVKCFNKAL-PLAR 345
              LQ +G+ + A+ + + A ++D +C+ A+   G  +      +EA   F+     LA+
Sbjct: 193 YSYLQ-KGDYNGALGVAKTARNMDLTCVPAWFVSGEAQYHNRNWKEAFYSFDGGFNALAK 251

Query: 346 DEAELSHIYSLRDAAIAQ-MKVCERYNIKKKVSPRSQNITKNEKL---AIKQLRENNDII 401
           ++  L +    +   I + M+  + Y +    + R   I +   +    IK+ +E  D+ 
Sbjct: 252 ND--LWYYQGSKKTRITKDMQPMDSYYVAIASNVRFTGIWERTTVINYKIKRYQETIDLY 309

Query: 402 -----IRPADKGGKTVVMDKADYTQKMTSILNS--NDYEIIPGDPTKTIEESEKYGNLEN 454
                I P    G     D A   +++ S  +S     +++P DP    E    YG    
Sbjct: 310 DQILAITPDYGEGWKKKGDSAIKIKRIESARDSYKRALDLLPNDP----EVLSSYGYTTG 365

Query: 455 ESGQKHAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTI 510
             G      D+ +A   +++A +++P     Y  +G I+  +GQ E+AL  L K +
Sbjct: 366 LLG------DYLEAMKYINKALELEPGYTRGYLYKGLIFSFYGQREDALSALQKGL 415


>gi|156847128|ref|XP_001646449.1| hypothetical protein Kpol_1048p21 [Vanderwaltozyma polyspora DSM
           70294]
 gi|156117126|gb|EDO18591.1| hypothetical protein Kpol_1048p21 [Vanderwaltozyma polyspora DSM
           70294]
          Length = 597

 Score = 67.0 bits (162), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 68/252 (26%), Positives = 119/252 (47%), Gaps = 27/252 (10%)

Query: 129 SVDPKIKVNAHIKRAVVHLHAASDFTKAFADL-DEAEKVDPNVADSYYQRGQIYCLFGQY 187
           S++   +VNA+I  A++        +K + D  D+A  VDPN A  YY RGQ++ L  QY
Sbjct: 336 SIELHPRVNAYIYSALIMADKGE--SKNYFDFFDKALDVDPNSAPVYYHRGQMHFLSQQY 393

Query: 188 EEALRNLDK-----TIALNPNFHVARAQRHFVVHKMIVPGDRERVEQSLKEFRNFVDTHS 242
           E+A  + +K     +  + P   +A    H         G  +  E    E +    T  
Sbjct: 394 EKAAADFEKAKESDSSNIFPYIQLACLTYH--------EGKFDDCETLFSEAKRKFPT-- 443

Query: 243 NVVEACTLFAQVLVDQEDFDGAEEYFNRSIRVDPENASLYVHRAMLM----LQARG---- 294
              E    +A+VL D+ DFD A + ++ + R++    +++V  + L+    L AR     
Sbjct: 444 -APEVPNFYAEVLTDKGDFDAASKQYDIAKRLEESLDAIHVGVSPLVGKATLLARQPTVE 502

Query: 295 NVDEAIKLIEKAISIDKSCMFAYETLGTIEVQRGRLEEAVKCFNKALPLARDEAELSHIY 354
           N+ E+  L+E+A  +D     A   L  +++Q+  ++EA+  F +A  LAR+  E     
Sbjct: 503 NLLESTTLLEEACKMDSRSEQAKIGLAQLKLQQEEIDEAITLFEEASDLARNMEEKLQAT 562

Query: 355 SLRDAAIAQMKV 366
           +  +A+  Q K+
Sbjct: 563 TFAEASKVQKKI 574



 Score = 38.5 bits (88), Expect = 9.6,   Method: Compositional matrix adjust.
 Identities = 18/37 (48%), Positives = 24/37 (64%)

Query: 472 LDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDK 508
            D+A  VDPN A  YY RGQ++ L  QYE+A  + +K
Sbjct: 366 FDKALDVDPNSAPVYYHRGQMHFLSQQYEKAAADFEK 402


>gi|428202816|ref|YP_007081405.1| tetratricopeptide repeat protein,protein kinase family protein
           [Pleurocapsa sp. PCC 7327]
 gi|427980248|gb|AFY77848.1| tetratricopeptide repeat protein,protein kinase family protein
           [Pleurocapsa sp. PCC 7327]
          Length = 739

 Score = 67.0 bits (162), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 44/195 (22%), Positives = 95/195 (48%), Gaps = 7/195 (3%)

Query: 147 LHAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHV 206
           L+   D+ +A A  ++A K+ P   +++  +G ++    +Y+E+L   +K I + PN   
Sbjct: 367 LYELKDYDRALAAYEQALKIRPEYGEAWQGKGDVFQAQKRYKESLIAYEKAIQIQPNRWQ 426

Query: 207 ARAQRHFVVHKMIVPGDRERVEQSLKEFRNFVDTHSNVVEACTLFAQVLVDQEDFDGAEE 266
            R  R  V+ K+       + +++++ ++  +    N+ EA    AQV ++   +  A  
Sbjct: 427 PRLGRAQVLDKL------GKNQEAIETYKKVIKIKPNLAEAWLGLAQVQMELNQYSEAIA 480

Query: 267 YFNRSIRVDPENASLYVHRAMLMLQARGNVDEAIKLIEKAISIDKSCMFAYETLGTIEVQ 326
            ++R +++ PEN+  +  +       R   ++AIK  +KA+ I      A+   G + + 
Sbjct: 481 SYDRLLKMQPENSLAWYQQGWAWQNLR-EYEKAIKSYDKAVDIKPDLSSAWYQKGNVLMN 539

Query: 327 RGRLEEAVKCFNKAL 341
               E+AV+ + KA+
Sbjct: 540 LEEYEKAVEAYAKAV 554



 Score = 62.4 bits (150), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 39/190 (20%), Positives = 89/190 (46%), Gaps = 7/190 (3%)

Query: 152 DFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQR 211
           ++ KA    D+A  + P+++ ++YQ+G +     +YE+A+    K +   P  H A   +
Sbjct: 508 EYEKAIKSYDKAVDIKPDLSSAWYQKGNVLMNLEEYEKAVEAYAKAVQFQPKLHQAWYSQ 567

Query: 212 HFVVHKMIVPGDRERVEQSLKEFRNFVDTHSNVVEACTLFAQVLVDQEDFDGAEEYFNRS 271
              + K+       R E+++  +       SN  +A      +L   + ++ A   ++  
Sbjct: 568 GIALSKL------GRNEEAIAAYSQATQVKSNYAQAWYQKGWMLHQLKRYEEAISAYDTV 621

Query: 272 IRVDPENASLYVHRAMLMLQARGNVDEAIKLIEKAISIDKSCMFAYETLGTIEVQRGRLE 331
           IR+ P +   + ++  ++    GN + AI   ++ ++I++    A+ + G   +   R +
Sbjct: 622 IRLRPSDYQAWYNKGNVLYNL-GNYEGAIAAYKQTVAIERDYYQAWNSQGNALLLLKRYD 680

Query: 332 EAVKCFNKAL 341
           EAV  +++AL
Sbjct: 681 EAVNAYDRAL 690



 Score = 48.1 bits (113), Expect = 0.013,   Method: Compositional matrix adjust.
 Identities = 66/282 (23%), Positives = 121/282 (42%), Gaps = 24/282 (8%)

Query: 247 ACTLFAQ--VLVDQEDFDGAEEYFNRSIRVDPENASLYVHRAMLMLQARGNVDEAIKLIE 304
           A  L+ Q  +L + +D+D A   + +++++ PE    +  +  +  QA+    E++   E
Sbjct: 357 ATDLYRQGNILYELKDYDRALAAYEQALKIRPEYGEAWQGKGDV-FQAQKRYKESLIAYE 415

Query: 305 KAISIDKSCMFAYETLGTIEV--QRGRLEEAVKCFNKALPLARDEAELSHIYSLRDAAIA 362
           KAI I  +       LG  +V  + G+ +EA++ + K + +  + AE     +    A  
Sbjct: 416 KAIQIQPNRW--QPRLGRAQVLDKLGKNQEAIETYKKVIKIKPNLAE-----AWLGLAQV 468

Query: 363 QMKVCE------RYNIKKKVSPRSQNITKNEKLAIKQLRENNDIIIRPADKGGKTVVMDK 416
           QM++ +       Y+   K+ P +      +  A + LRE    I +  DK         
Sbjct: 469 QMELNQYSEAIASYDRLLKMQPENSLAWYQQGWAWQNLREYEKAI-KSYDKAVDIKPDLS 527

Query: 417 ADYTQKMTSILNSNDYEIIPGDPTKTIEESEKYGNLENESGQKHAASDFTK---AFADLD 473
           + + QK   ++N  +YE       K ++   K        G   A S   +   A A   
Sbjct: 528 SAWYQKGNVLMNLEEYEKAVEAYAKAVQFQPKLHQAWYSQG--IALSKLGRNEEAIAAYS 585

Query: 474 EAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPN 515
           +A +V  N A ++YQ+G +     +YEEA+   D  I L P+
Sbjct: 586 QATQVKSNYAQAWYQKGWMLHQLKRYEEAISAYDTVIRLRPS 627


>gi|145480427|ref|XP_001426236.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
 gi|124393310|emb|CAK58838.1| unnamed protein product [Paramecium tetraurelia]
          Length = 821

 Score = 67.0 bits (162), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 100/439 (22%), Positives = 186/439 (42%), Gaps = 57/439 (12%)

Query: 138 AHIKRAVVHLHAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKT 197
           A+IKR  + +       +A  D     ++DP  A+ YY RG +    G  E AL + +K 
Sbjct: 186 AYIKRGEICIQIGQK-QQALKDYTTVIQIDPKNAEFYYNRGVLNHDMGNVESALLDYNKA 244

Query: 198 IALNPNFHVARAQRHFVVHKMIVPGDRERVEQSLKEFRNFV---DTHSNVV--EACTLFA 252
           I L+P       + HF  H+ I   +    EQ+L ++   +    THS            
Sbjct: 245 IELDP----MDPKFHF--HRGIQNNEMGNKEQALLDYNQVILLDPTHSRTYCNRGFLNLY 298

Query: 253 QVLVDQEDF---DGAEEYFNRSIRVDPENASLYVHRAMLMLQARGNVDEAIKLIEKAISI 309
           ++ + Q++    D A   FN++I++DP ++  Y +R ++  + + N D+A+   +KAI +
Sbjct: 299 KIGIVQKNIGNKDQAVVDFNKAIQLDPSSSMFYYNRGVIYYEMK-NYDQALLDYDKAIEL 357

Query: 310 DKSCMFAYETLGTIEVQRGRLEEAVKCFNKALPLARDEAEL------SHIYSL------- 356
           D +    Y   G +    G +++A+  + +A+ L     +       ++IY L       
Sbjct: 358 DATDPKIYYNRGILYQDIGNIQQALLNYTQAIHLDPMNPKYYYNRGNNNIYGLGNLYGEM 417

Query: 357 --RDAAIAQMKVCERYNIKKKVSPRSQNI----TKNEKLAIKQLRENNDIIIRPADKGGK 410
             +D A+       + N   + +  ++ I      N++ A+  L  N  +I+ P +    
Sbjct: 418 GNKDLALLDYDKVIQLNPNDEKAYCNRGILHKDMGNQEKAL--LDYNQALILNPME---- 471

Query: 411 TVVMDKADYTQKMTSILNSN---------DY-EIIPGDPTKTIEESEKYGNLENESGQKH 460
            +        + +  ILN+          DY + I  DP  +     + G L +E G+K 
Sbjct: 472 AITYINRGILRFIKGILNNFMGNKEKSLIDYNKSIELDPLNSFAYINRVGLLYDELGKKE 531

Query: 461 AASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVAR 520
                  A  D + A  +D   +  YY+RG +Y   G  E+AL +L  +I L+  + +A 
Sbjct: 532 F------ALVDYNNAIFLDSKNSKFYYKRGVLYESLGNKEQALLDLSISIQLDSKYALAY 585

Query: 521 AQRHFVWTSTLAELMAFSD 539
             R  ++     +  A  D
Sbjct: 586 MSRGSIYFEIGNKQFALDD 604



 Score = 63.5 bits (153), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 102/428 (23%), Positives = 167/428 (39%), Gaps = 95/428 (22%)

Query: 104 RATVYIFTSQSTKAIEDLTQLVEDTSVDPKIKVNAHIKRAVVHLHAASDFTKAFADLDEA 163
           R  +Y       +A+ D  + +E  + DPKI  N    R +++     +  +A  +  +A
Sbjct: 334 RGVIYYEMKNYDQALLDYDKAIELDATDPKIYYN----RGILY-QDIGNIQQALLNYTQA 388

Query: 164 EKVDPNVADSYYQRGQ--IYCLFGQYEE------ALRNLDKTIALNPNFHVARAQRHFVV 215
             +DP     YY RG   IY L   Y E      AL + DK I LNPN   A   R  ++
Sbjct: 389 IHLDPMNPKYYYNRGNNNIYGLGNLYGEMGNKDLALLDYDKVIQLNPNDEKAYCNRG-IL 447

Query: 216 HKMIVPGDRERVEQSLKEFRNFVDTHSNVVEACTLFAQVLVDQEDFDGAEEYFNRSIRVD 275
           HK +  G++E+                            L+D          +N+++ ++
Sbjct: 448 HKDM--GNQEKA---------------------------LLD----------YNQALILN 468

Query: 276 PENASLYVHRAMLML------QARGNVDEAIKLIEKAISIDKSCMFAY-ETLGTIEVQRG 328
           P  A  Y++R +L           GN ++++    K+I +D    FAY   +G +  + G
Sbjct: 469 PMEAITYINRGILRFIKGILNNFMGNKEKSLIDYNKSIELDPLNSFAYINRVGLLYDELG 528

Query: 329 RLEEAVKCFNKALPLARDEAELSHIYSLRDAAIAQMKVCERYNIKKKVSPRSQNITKNEK 388
           + E A+  +N A+ L   +++ S  Y  R      +      N ++ +   S +I  + K
Sbjct: 529 KKEFALVDYNNAIFL---DSKNSKFYYKRGVLYESLG-----NKEQALLDLSISIQLDSK 580

Query: 389 LAIKQLRENNDIIIRPADKGGKTVVMDKADYTQKMTSILNSNDYEI-IPGDPTKTIEESE 447
            A+  +   +       + G K   +D               DY + I  DP K I    
Sbjct: 581 YALAYMSRGSIYF----EIGNKQFALD---------------DYSLAIQLDPLKAI---- 617

Query: 448 KYGNLENESGQKHAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLD 507
              N  N     H   +  +A  D   A K+DPN   SY  RG IY   GQY   L +  
Sbjct: 618 ---NYYNRGVLYHELGNNEQAILDFSMAIKLDPNDVRSYCNRGVIYINRGQYNFGLSDYL 674

Query: 508 KTIALNPN 515
           +   L P+
Sbjct: 675 RANHLQPD 682



 Score = 58.5 bits (140), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 67/283 (23%), Positives = 126/283 (44%), Gaps = 37/283 (13%)

Query: 244 VVEACTLFAQVLVDQEDFDGAEEYFNRSIRVDPENASLYVHRAMLMLQARGNVDEAIKLI 303
           ++++ T+F +  + QE  +  E    ++I+++P N  L   R   +   +G V EA+K  
Sbjct: 119 LIKSATVFQRKKMFQESQEDCE----KAIQINP-NYGLAYMRIGNLKHEQGQVYEALKYY 173

Query: 304 EKAISIDKSCMFAYETLGTIEVQRGRLEEAVKCFNKALPLARDEAELSHIYSLRDAAIAQ 363
            KAI +D+ C +AY   G I +Q G+ ++A+K +   + +    AE  +   + +  +  
Sbjct: 174 NKAIEVDEKCCYAYIKRGEICIQIGQKQQALKDYTTVIQIDPKNAEFYYNRGVLNHDMGN 233

Query: 364 MK-VCERYNIKKKVSPRSQNITKNEKLAIKQLRENNDIIIRPADKGGKTVVMDKADYTQK 422
           ++     YN   ++ P       + K    +  +NN++       G K   +   DY Q 
Sbjct: 234 VESALLDYNKAIELDPM------DPKFHFHRGIQNNEM-------GNKEQAL--LDYNQ- 277

Query: 423 MTSILNSNDYEIIPGDPTKTIEESEK-YGNLENESGQKHAASDFTKAFADLDEAEKVDPN 481
                      +I  DPT +     + + NL      +    +  +A  D ++A ++DP+
Sbjct: 278 -----------VILLDPTHSRTYCNRGFLNLYKIGIVQKNIGNKDQAVVDFNKAIQLDPS 326

Query: 482 VADSYYQRGQIYCLFGQYEEALRNLDKTIAL---NPNFHVARA 521
            +  YY RG IY     Y++AL + DK I L   +P  +  R 
Sbjct: 327 SSMFYYNRGVIYYEMKNYDQALLDYDKAIELDATDPKIYYNRG 369



 Score = 40.8 bits (94), Expect = 1.7,   Method: Compositional matrix adjust.
 Identities = 38/166 (22%), Positives = 71/166 (42%), Gaps = 23/166 (13%)

Query: 104 RATVYIFTSQSTKAIEDLTQLVEDTSVDPKIKVNAHIKRAVVHLHAASDFTKAFA--DLD 161
           R  +Y       +A+ DL+  ++   +D K  + A++ R  ++    +   K FA  D  
Sbjct: 554 RGVLYESLGNKEQALLDLSISIQ---LDSKYAL-AYMSRGSIYFEIGN---KQFALDDYS 606

Query: 162 EAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPN----------FHVARAQR 211
            A ++DP  A +YY RG +Y   G  E+A+ +    I L+PN           ++ R Q 
Sbjct: 607 LAIQLDPLKAINYYNRGVLYHELGNNEQAILDFSMAIKLDPNDVRSYCNRGVIYINRGQY 666

Query: 212 HFVVHKMI----VPGDRERVEQSLKEFRNFVDTHSNVVEACTLFAQ 253
           +F +   +    +  D   + Q L++  +      N  + C +  Q
Sbjct: 667 NFGLSDYLRANHLQPDNPFISQVLEQLYSLQQNQPNSTDFCQITKQ 712


>gi|428310178|ref|YP_007121155.1| serine/threonine protein kinase [Microcoleus sp. PCC 7113]
 gi|428251790|gb|AFZ17749.1| serine/threonine protein kinase [Microcoleus sp. PCC 7113]
          Length = 606

 Score = 67.0 bits (162), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 76/358 (21%), Positives = 148/358 (41%), Gaps = 45/358 (12%)

Query: 169 NVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQRHFVVHKMIVPGDRERVE 228
           N   S + +  I C   +Y EA+   +  I + PNF+ A  +R   ++++      ER E
Sbjct: 284 NSPQSLFNKAHILCELKRYSEAIAYYEDAILIQPNFYQAWYERGKALYQL------ERYE 337

Query: 229 QSLKEFRNFVDTHSNVVEACTLFAQVLVDQEDFDGAEEYFNRSIRVDPENASLYVHRAML 288
            ++  +   +   ++  E      Q L   + +       ++++++ P+ A  +V R ++
Sbjct: 338 DAIASYDQVIQFQTDDAEVWFERTQALYRLQSYSEVMMGLDKALQIRPDYAEAWVMRGVV 397

Query: 289 MLQARGNVDEAIKLIEKAISIDKSCMFAYETLGTIEVQRGRLEEAVKCFNKALPLARDEA 348
           +   + + +EAI    KAI        A+   G +     R EEA   F++ + L  + A
Sbjct: 398 LRNLQRD-EEAIACYNKAIEFKPDYAVAWYNRGVLLASWQRYEEAFTAFDQVIQLQPNNA 456

Query: 349 ELSHIYSLRDAAIAQMKVCERYNIKKKVSPRSQNITKNEKLAIKQLRENNDIIIRPADKG 408
                +  R AA+  +   +RY            ++ N+ +A      N + +     +G
Sbjct: 457 V---AWYNRGAALGNL---QRY--------EDAIVSCNQAIAF-----NPNYVQAWFQRG 497

Query: 409 GKTVVMDKADYTQKMTSILNSNDYEIIPGDPTKTIEESEKYGNLENESG-QKHAASDFTK 467
               + +   Y + +T+               K I+    YG    + G   +    +  
Sbjct: 498 --MALGELQRYEEAITAY-------------DKVIQLQPDYGEAWFQRGFALYNLQRYED 542

Query: 468 AFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVA---RAQ 522
           A A  D+A + +P  A+++  RG +     +YEEA+ + DK I + PNF +A   RAQ
Sbjct: 543 AIASYDQAIEFNPLDAEAWGNRGGVLLKLQRYEEAIASFDKAIQIQPNFPMAIYNRAQ 600



 Score = 61.6 bits (148), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 49/206 (23%), Positives = 96/206 (46%), Gaps = 8/206 (3%)

Query: 138 AHIKRAVVHLHAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKT 197
           A + R VV  +   D  +A A  ++A +  P+ A ++Y RG +   + +YEEA    D+ 
Sbjct: 390 AWVMRGVVLRNLQRD-EEAIACYNKAIEFKPDYAVAWYNRGVLLASWQRYEEAFTAFDQV 448

Query: 198 IALNPNFHVARAQRHFVVHKMIVPGDRERVEQSLKEFRNFVDTHSNVVEACTLFAQVLVD 257
           I L PN  VA   R   +      G+ +R E ++      +  + N V+A       L +
Sbjct: 449 IQLQPNNAVAWYNRGAAL------GNLQRYEDAIVSCNQAIAFNPNYVQAWFQRGMALGE 502

Query: 258 QEDFDGAEEYFNRSIRVDPENASLYVHRAMLMLQARGNVDEAIKLIEKAISIDKSCMFAY 317
            + ++ A   +++ I++ P+    +  R   +   +   ++AI   ++AI  +     A+
Sbjct: 503 LQRYEEAITAYDKVIQLQPDYGEAWFQRGFALYNLQ-RYEDAIASYDQAIEFNPLDAEAW 561

Query: 318 ETLGTIEVQRGRLEEAVKCFNKALPL 343
              G + ++  R EEA+  F+KA+ +
Sbjct: 562 GNRGGVLLKLQRYEEAIASFDKAIQI 587



 Score = 52.4 bits (124), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 44/206 (21%), Positives = 92/206 (44%), Gaps = 13/206 (6%)

Query: 147 LHAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHV 206
           L+    +  A A  D+  +   + A+ +++R Q       Y E +  LDK + + P++  
Sbjct: 330 LYQLERYEDAIASYDQVIQFQTDDAEVWFERTQALYRLQSYSEVMMGLDKALQIRPDYAE 389

Query: 207 ARAQRHFVVHKMIVPGDRERVEQSLKEFRNFVDTHSNVVEACTLFAQVLVDQEDFDGAEE 266
           A   R  V+  +      +R E+++  +   ++   +   A      +L   + ++ A  
Sbjct: 390 AWVMRGVVLRNL------QRDEEAIACYNKAIEFKPDYAVAWYNRGVLLASWQRYEEAFT 443

Query: 267 YFNRSIRVDPENASLYVHRAMLMLQARGNV---DEAIKLIEKAISIDKSCMFAYETLGTI 323
            F++ I++ P NA  + +R      A GN+   ++AI    +AI+ + + + A+   G  
Sbjct: 444 AFDQVIQLQPNNAVAWYNRGA----ALGNLQRYEDAIVSCNQAIAFNPNYVQAWFQRGMA 499

Query: 324 EVQRGRLEEAVKCFNKALPLARDEAE 349
             +  R EEA+  ++K + L  D  E
Sbjct: 500 LGELQRYEEAITAYDKVIQLQPDYGE 525



 Score = 51.2 bits (121), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 33/139 (23%), Positives = 65/139 (46%), Gaps = 6/139 (4%)

Query: 153 FTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQRH 212
           +  A    ++A   +PN   +++QRG       +YEEA+   DK I L P++  A  QR 
Sbjct: 472 YEDAIVSCNQAIAFNPNYVQAWFQRGMALGELQRYEEAITAYDKVIQLQPDYGEAWFQRG 531

Query: 213 FVVHKMIVPGDRERVEQSLKEFRNFVDTHSNVVEACTLFAQVLVDQEDFDGAEEYFNRSI 272
           F ++ +      +R E ++  +   ++ +    EA      VL+  + ++ A   F+++I
Sbjct: 532 FALYNL------QRYEDAIASYDQAIEFNPLDAEAWGNRGGVLLKLQRYEEAIASFDKAI 585

Query: 273 RVDPENASLYVHRAMLMLQ 291
           ++ P       +RA  + Q
Sbjct: 586 QIQPNFPMAIYNRAQALSQ 604



 Score = 46.2 bits (108), Expect = 0.041,   Method: Compositional matrix adjust.
 Identities = 73/357 (20%), Positives = 140/357 (39%), Gaps = 64/357 (17%)

Query: 153 FTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQRH 212
           +++A A  ++A  + PN   ++Y+RG+      +YE+A+ + D+ I     F    A+  
Sbjct: 302 YSEAIAYYEDAILIQPNFYQAWYERGKALYQLERYEDAIASYDQVI----QFQTDDAEVW 357

Query: 213 FVVHKMIVPGDRERVEQSLKEFRNFVDTHSNVVEACTLFAQVLVDQEDFDGAEEYFNRSI 272
           F           ER  Q+L   +++ +    +                        ++++
Sbjct: 358 F-----------ERT-QALYRLQSYSEVMMGL------------------------DKAL 381

Query: 273 RVDPENASLYVHRAMLMLQARGNVDEAIKLIEKAISIDKSCMFAYETLGTIEVQRGRLEE 332
           ++ P+ A  +V R +++   + + +EAI    KAI        A+   G +     R EE
Sbjct: 382 QIRPDYAEAWVMRGVVLRNLQRD-EEAIACYNKAIEFKPDYAVAWYNRGVLLASWQRYEE 440

Query: 333 AVKCFNKALPLARDEAELSHIYSLRDAAIAQMKVCE----RYNIKKKVSPRSQNITKNEK 388
           A   F++ + L  + A     +  R AA+  ++  E      N     +P          
Sbjct: 441 AFTAFDQVIQLQPNNAV---AWYNRGAALGNLQRYEDAIVSCNQAIAFNPNYVQAWFQRG 497

Query: 389 LAIKQLRENNDIIIRPADKGGKTVVMDKADYT----QKMTSILNSNDYEIIPGDPTKTIE 444
           +A+ +L+   + I    DK    V+  + DY     Q+  ++ N   YE       + IE
Sbjct: 498 MALGELQRYEEAIT-AYDK----VIQLQPDYGEAWFQRGFALYNLQRYEDAIASYDQAIE 552

Query: 445 ----ESEKYGNLENESGQKHAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFG 497
               ++E +G   N  G       + +A A  D+A ++ PN   + Y R Q     G
Sbjct: 553 FNPLDAEAWG---NRGGVLLKLQRYEEAIASFDKAIQIQPNFPMAIYNRAQALSQLG 606



 Score = 44.7 bits (104), Expect = 0.14,   Method: Compositional matrix adjust.
 Identities = 53/244 (21%), Positives = 98/244 (40%), Gaps = 31/244 (12%)

Query: 298 EAIKLIEKAISIDKSCMFAYETLGTIEVQRGRLEEAVKCFNKALPLARDEAELSH----- 352
           EAI   E AI I  +   A+   G    Q  R E+A+  +++ +    D+AE+       
Sbjct: 304 EAIAYYEDAILIQPNFYQAWYERGKALYQLERYEDAIASYDQVIQFQTDDAEVWFERTQA 363

Query: 353 IYSLRDAAIAQMKVCERYNIKKKVSPRS-------QNITKNEKLAI----KQLRENNDII 401
           +Y L+  +   M + +   I+   +          +N+ ++E+ AI    K +    D  
Sbjct: 364 LYRLQSYSEVMMGLDKALQIRPDYAEAWVMRGVVLRNLQRDEE-AIACYNKAIEFKPDYA 422

Query: 402 IRPADKGGKTVVMDKADYTQKMTSILNSNDYEIIPGDPTKTIEESEKYGNLENESGQKHA 461
           +   ++G   ++     Y +  T+       ++ P +           GNL+        
Sbjct: 423 VAWYNRG--VLLASWQRYEEAFTAF--DQVIQLQPNNAVAWYNRGAALGNLQR------- 471

Query: 462 ASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARA 521
              +  A    ++A   +PN   +++QRG       +YEEA+   DK I L P++  A  
Sbjct: 472 ---YEDAIVSCNQAIAFNPNYVQAWFQRGMALGELQRYEEAITAYDKVIQLQPDYGEAWF 528

Query: 522 QRHF 525
           QR F
Sbjct: 529 QRGF 532



 Score = 42.0 bits (97), Expect = 0.79,   Method: Compositional matrix adjust.
 Identities = 23/75 (30%), Positives = 39/75 (52%), Gaps = 4/75 (5%)

Query: 465 FTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQRH 524
           + +AF   D+  ++ PN A ++Y RG       +YE+A+ + ++ IA NPN+  A  QR 
Sbjct: 438 YEEAFTAFDQVIQLQPNNAVAWYNRGAALGNLQRYEDAIVSCNQAIAFNPNYVQAWFQRG 497

Query: 525 FVWTSTLAELMAFSD 539
                 L EL  + +
Sbjct: 498 M----ALGELQRYEE 508



 Score = 40.8 bits (94), Expect = 1.7,   Method: Compositional matrix adjust.
 Identities = 23/67 (34%), Positives = 37/67 (55%), Gaps = 3/67 (4%)

Query: 147 LHAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHV 206
           L+    +  A A  D+A + +P  A+++  RG +     +YEEA+ + DK I + PNF +
Sbjct: 534 LYNLQRYEDAIASYDQAIEFNPLDAEAWGNRGGVLLKLQRYEEAIASFDKAIQIQPNFPM 593

Query: 207 A---RAQ 210
           A   RAQ
Sbjct: 594 AIYNRAQ 600


>gi|428319180|ref|YP_007117062.1| Tetratricopeptide TPR_1 repeat-containing protein [Oscillatoria
           nigro-viridis PCC 7112]
 gi|428242860|gb|AFZ08646.1| Tetratricopeptide TPR_1 repeat-containing protein [Oscillatoria
           nigro-viridis PCC 7112]
          Length = 400

 Score = 67.0 bits (162), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 86/383 (22%), Positives = 143/383 (37%), Gaps = 56/383 (14%)

Query: 147 LHAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHV 206
           L A   F  A    +EA +++P   ++ Y +G      GQ EEA+   +K++ + PN   
Sbjct: 35  LEAMGRFQAAIESWEEAIELEPKFYEARYNQGVALKKLGQLEEAIAAYNKSLTIKPNNPE 94

Query: 207 ARAQRHFVVHKMIVPGDRERVEQSLKEFRNFVDTHSNVVEACTLFAQVLVDQEDFDGAEE 266
           A   R  V+ K+       R+ +++  +   ++   +  EA T     LV  E F  A  
Sbjct: 95  AWYNRANVLRKL------NRLSEAIASYEKAIELKPSYREAWTNRGNTLVSLEKFSEAIA 148

Query: 267 YFNRSIRVDPENASLYVHRAMLMLQARGNVDEAIKLIEKAISIDKSCMFAYETLGTIEVQ 326
            + ++I + P+    + ++A  + ++  N   AI   +KAI +      A+   G     
Sbjct: 149 SYEKAIAIKPDYCEAWYNKAFALRKSDQNT-AAIASYDKAIELKPDLHQAWYNRGLALAD 207

Query: 327 RGRLEEAVKCFNKALPLARDEAELSHIYSLRDAAIAQMKVCERYNIKKKVSPRSQNITKN 386
                EAV  ++K L L  + A     ++ R  AIAQM   E                  
Sbjct: 208 EKLYPEAVASYDKTLQLRPNSA---AAWNKRGTAIAQMGKFE------------------ 246

Query: 387 EKLAIKQLRENNDIIIRPADKGGKTVVMDKADYTQKMTSILNSNDYEIIPGDPTKTIE-E 445
                          I   DK       D   +  +  ++ N   +E       KT+E  
Sbjct: 247 -------------AAIASWDKALALKPNDSETFYNRGLALANLQRFEEAIASWDKTLELH 293

Query: 446 SEKYGNLENESGQKHAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEE---- 501
            +      N +        FT+A A  D+   + P+  + YYQ+  +Y L  Q  E    
Sbjct: 294 PDNTEAWYNRAIALKKIQRFTEAIASYDKIIALKPDDPNLYYQKACVYALEKQAGEVANS 353

Query: 502 ----------ALRNLDKTIALNP 514
                     A+ NL K I LNP
Sbjct: 354 QELVATSIGLAIENLSKAIELNP 376



 Score = 58.9 bits (141), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 80/367 (21%), Positives = 141/367 (38%), Gaps = 93/367 (25%)

Query: 160 LDEAEK---VDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQRHFVVH 216
           +D  EK   V+   A   Y+RG      G+++ A+ + ++ I L P F+ AR  +   + 
Sbjct: 11  IDSGEKSIAVNTQKAQILYERGNALEAMGRFQAAIESWEEAIELEPKFYEARYNQGVALK 70

Query: 217 KMIVPGDRERVEQSLKEFRNFVDTHSNVVEACTLFAQVLVDQEDFDGAEEYFNRSIRVDP 276
           K+       ++E+++  +                                  N+S+ + P
Sbjct: 71  KL------GQLEEAIAAY----------------------------------NKSLTIKP 90

Query: 277 ENASLYVHRAMLMLQARGNVDEAIKLIEKAISIDKSCMFAYETLGTIEVQRGRLEEAVKC 336
            N   + +RA  +L+    + EAI   EKAI +  S   A+   G   V   +  EA+  
Sbjct: 91  NNPEAWYNRAN-VLRKLNRLSEAIASYEKAIELKPSYREAWTNRGNTLVSLEKFSEAIAS 149

Query: 337 FNKALPLARD--EAELSHIYSLRD-----AAIAQMKVCERYNIKKKVSPRSQNITKNEKL 389
           + KA+ +  D  EA  +  ++LR      AAIA       Y+   ++ P       N  L
Sbjct: 150 YEKAIAIKPDYCEAWYNKAFALRKSDQNTAAIAS------YDKAIELKPDLHQAWYNRGL 203

Query: 390 AIKQLRENNDIIIRPADKGGKTVVMDKADYTQKMTSILNSNDYEIIPGDPTKTIEESEKY 449
           A+                       D+  Y + + S               KT++     
Sbjct: 204 AL----------------------ADEKLYPEAVASY-------------DKTLQLRPNS 228

Query: 450 GNLENESGQKHA-ASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDK 508
               N+ G   A    F  A A  D+A  + PN ++++Y RG       ++EEA+ + DK
Sbjct: 229 AAAWNKRGTAIAQMGKFEAAIASWDKALALKPNDSETFYNRGLALANLQRFEEAIASWDK 288

Query: 509 TIALNPN 515
           T+ L+P+
Sbjct: 289 TLELHPD 295



 Score = 52.0 bits (123), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 42/205 (20%), Positives = 88/205 (42%), Gaps = 7/205 (3%)

Query: 145 VHLHAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNF 204
           V L       +A A  +++  + PN  +++Y R  +     +  EA+ + +K I L P++
Sbjct: 67  VALKKLGQLEEAIAAYNKSLTIKPNNPEAWYNRANVLRKLNRLSEAIASYEKAIELKPSY 126

Query: 205 HVARAQRHFVVHKMIVPGDRERVEQSLKEFRNFVDTHSNVVEACTLFAQVLVDQEDFDGA 264
             A   R   +  +      E+  +++  +   +    +  EA    A  L   +    A
Sbjct: 127 REAWTNRGNTLVSL------EKFSEAIASYEKAIAIKPDYCEAWYNKAFALRKSDQNTAA 180

Query: 265 EEYFNRSIRVDPENASLYVHRAMLMLQARGNVDEAIKLIEKAISIDKSCMFAYETLGTIE 324
              ++++I + P+    + +R  L L       EA+   +K + +  +   A+   GT  
Sbjct: 181 IASYDKAIELKPDLHQAWYNRG-LALADEKLYPEAVASYDKTLQLRPNSAAAWNKRGTAI 239

Query: 325 VQRGRLEEAVKCFNKALPLARDEAE 349
            Q G+ E A+  ++KAL L  +++E
Sbjct: 240 AQMGKFEAAIASWDKALALKPNDSE 264



 Score = 46.6 bits (109), Expect = 0.032,   Method: Compositional matrix adjust.
 Identities = 63/261 (24%), Positives = 110/261 (42%), Gaps = 48/261 (18%)

Query: 270 RSIRVDPENASLYVHRAMLMLQARGNVDEAIKLIEKAISIDKSCMFAYETLGTIEVQRGR 329
           +SI V+ + A +   R    L+A G    AI+  E+AI ++     A    G    + G+
Sbjct: 16  KSIAVNTQKAQILYERGN-ALEAMGRFQAAIESWEEAIELEPKFYEARYNQGVALKKLGQ 74

Query: 330 LEEAVKCFNKALPLARDEAELSHIYSLRDAAIAQMKVCERYNIKKKVSPRSQNITKNEKL 389
           LEEA+  +NK+L +  +  E  +                R N+ +K++  S+ I   EK 
Sbjct: 75  LEEAIAAYNKSLTIKPNNPEAWY---------------NRANVLRKLNRLSEAIASYEKA 119

Query: 390 AIKQLRENNDIIIRPA------DKGGKTVVMDKADYTQKMTSILNSNDYEIIPGDPTKTI 443
                     I ++P+      ++G   V ++K  +++ + S      YE       K I
Sbjct: 120 ----------IELKPSYREAWTNRGNTLVSLEK--FSEAIAS------YE-------KAI 154

Query: 444 EESEKYGN-LENESGQKHAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEA 502
                Y     N++     +   T A A  D+A ++ P++  ++Y RG        Y EA
Sbjct: 155 AIKPDYCEAWYNKAFALRKSDQNTAAIASYDKAIELKPDLHQAWYNRGLALADEKLYPEA 214

Query: 503 LRNLDKTIALNPNFHVARAQR 523
           + + DKT+ L PN   A  +R
Sbjct: 215 VASYDKTLQLRPNSAAAWNKR 235


>gi|241957463|ref|XP_002421451.1| component of the mitochondrial Translocase of the Outer Membrane
           (TOM), putative [Candida dubliniensis CD36]
 gi|223644795|emb|CAX40786.1| component of the mitochondrial Translocase of the Outer Membrane
           (TOM), putative [Candida dubliniensis CD36]
          Length = 620

 Score = 67.0 bits (162), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 78/360 (21%), Positives = 154/360 (42%), Gaps = 36/360 (10%)

Query: 22  PSKQFIKTYLKSFPNDPILQPDGLSNGVELTNGDTNESHELDLLSKA--------KRAFE 73
           PS   I ++  +F  +   +P+G++        ++N++  +  L +A        +  +E
Sbjct: 262 PSAATIGSFFGAFVEE--TEPEGIN--------ESNDNEGIKFLGQALQKIKANTQNGYE 311

Query: 74  HEDYLTAIRHCTEEIESTSSNHTKALARLLRATVYIFTSQSTKAIEDLTQLVEDTSVDPK 133
             D L  I     E+E  S+   K +  +    +  F       +     + +  S+ P+
Sbjct: 312 EADEL--IIKAVNELEKQSNADLKPVLAIGLEYLAAFQFLKNDPVSAAESIEKAISLKPR 369

Query: 134 IKVNAHIKRAVVHLHAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRN 193
            +  A++ RA+++   +S +  A  D   AE++DP   D +Y  GQ++ L G    A  N
Sbjct: 370 PR--AYVFRALINADKSS-YEAALKDFKTAEELDPKCPDIFYHLGQLFYLTGDLTNAETN 426

Query: 194 LDKTIALNPNFHVARAQRHFVVHKMIVPGDRERVEQSLKEFRNFVDTHSNVVEACTLFAQ 253
            +K   L+P+   A  Q   + +K        ++E + ++F           E    + +
Sbjct: 427 FNKAKDLHPDNVYAYIQLACITYK------NGQIELANEKFTEAKLKFPTSPEVPNYYGE 480

Query: 254 VLVDQEDFDGAEEYFNRSIRVDPENASLYVHRAMLMLQAR-------GNVDEAIKLIEKA 306
           +L D+ D  GA + F  + R+  +     V    L+ QA          +DEA +L+ KA
Sbjct: 481 ILADKGDIQGACKQFEIASRLQEKLDRFSVGALPLINQATVISRESLEKIDEAEELLTKA 540

Query: 307 ISIDKSCMFAYETLGTIEVQRGRLEEAVKCFNKALPLARDEAELSHIYSLRDAAIAQMKV 366
            ++D     A  +L  I++Q+  +++A+  F ++  LAR   E     S  +A   Q ++
Sbjct: 541 CALDPKSELARISLAQIKLQKDEVDDAIILFEESSDLARSIEEKIQATSFAEATKMQKRI 600


>gi|428317098|ref|YP_007114980.1| serine/threonine protein kinase [Oscillatoria nigro-viridis PCC
           7112]
 gi|428240778|gb|AFZ06564.1| serine/threonine protein kinase [Oscillatoria nigro-viridis PCC
           7112]
          Length = 732

 Score = 67.0 bits (162), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 88/380 (23%), Positives = 153/380 (40%), Gaps = 48/380 (12%)

Query: 151 SDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQ 210
            D T A AD  +A  ++ + A+SYY+R       G  E+A+ +  + I +NP+   A   
Sbjct: 356 GDTTGAIADYTQAIALNASDAESYYKRANARYDTGATEQAIEDYTQAIKVNPSHTKALYN 415

Query: 211 RHFVVHKMIVPGDRERVEQSLKEFRNFVDTHSNVVEACTLFAQVLVDQEDFDGAEEYFNR 270
           R     ++ +   R  VE    +F   V  + +  EA +       D  D+  A E + +
Sbjct: 416 RGMA--RLDIGDKRGAVE----DFTQVVRLNPSDGEAYSQRGLAYYDLGDYRTAIEDYTQ 469

Query: 271 SIRVDPENASLYVHRAMLMLQARGNVDEAIKLIEKAISIDKSCMFAYETLGTIEVQRGRL 330
           +IR+ P +A  Y +R  L   A G+   A+    +A+ I       Y + G         
Sbjct: 470 AIRLSPNDAKAYSNRG-LARSAAGDKTGAMADFTQALQISPKQAGVYYSRGRARFNLADY 528

Query: 331 EEAVKCFNKALPLARDEAELSHIYSLRDAAIAQMKVCERYNIKKKVSPRSQNITKNEKLA 390
           + A++ + KA+ L  D   L+  Y+ R +A   +   +     K ++  ++ I  + K  
Sbjct: 529 QGAMEDYTKAIELQPD---LADAYTNRCSAYLNLATYD-----KAIADCTEGIRLDPK-- 578

Query: 391 IKQLRENNDIIIRPADKGGKTVVMDKADYTQKMTSILNSNDYEIIPGDPTKTIEESEKYG 450
                                   D+A Y  +  + LN   ++    D + TI  +   G
Sbjct: 579 ------------------------DEAAYNNRCVAYLNLKQFQKASEDCSLTIGLN---G 611

Query: 451 N----LENESGQKHAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNL 506
           N      N    + A+ D   A  D  +A +++P+ A +Y  RG IY     Y  A+ + 
Sbjct: 612 NNPKAYSNRGLARSASGDKQGALEDFTQAIRLNPSDAVAYSNRGTIYSELKNYPLAVEDF 671

Query: 507 DKTIALNPNFHVARAQRHFV 526
             ++ LNPN   A   R  V
Sbjct: 672 AHSLRLNPNNASAFYSRGLV 691



 Score = 55.8 bits (133), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 74/304 (24%), Positives = 119/304 (39%), Gaps = 27/304 (8%)

Query: 57  NESHELDLLSKAKRAFEHEDYLTAIRHCTEEIESTSSNHTKALARLLRATVYIFTSQSTK 116
           N SH   L ++     +  D   A+   T+ +     N +   A   R   Y        
Sbjct: 406 NPSHTKALYNRGMARLDIGDKRGAVEDFTQVVRL---NPSDGEAYSQRGLAYYDLGDYRT 462

Query: 117 AIEDLTQLVEDTSVDPKIKVNAHIKRAVVHLHAASDFTKAFADLDEAEKVDPNVADSYYQ 176
           AIED TQ +  +  D K   N  + R+     AA D T A AD  +A ++ P  A  YY 
Sbjct: 463 AIEDYTQAIRLSPNDAKAYSNRGLARS-----AAGDKTGAMADFTQALQISPKQAGVYYS 517

Query: 177 RGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQR-----HFVVHKMIVPGDRERVEQSL 231
           RG+       Y+ A+ +  K I L P+   A   R     +   +   +    E +    
Sbjct: 518 RGRARFNLADYQGAMEDYTKAIELQPDLADAYTNRCSAYLNLATYDKAIADCTEGIRLDP 577

Query: 232 KEFRNFVDTHSNVVEACTLFAQVLVDQEDFDGAEEYFNRSIRVDPENASLYVHRAMLMLQ 291
           K+   + +        C  +    ++ + F  A E  + +I ++  N   Y +R  L   
Sbjct: 578 KDEAAYNNR-------CVAY----LNLKQFQKASEDCSLTIGLNGNNPKAYSNRG-LARS 625

Query: 292 ARGNVDEAIKLIEKAISIDKSCMFAYETLGTIEVQRGRLEEAVKCFNKALPLARDEAELS 351
           A G+   A++   +AI ++ S   AY   GTI  +      AV+ F  +L L  + A  S
Sbjct: 626 ASGDKQGALEDFTQAIRLNPSDAVAYSNRGTIYSELKNYPLAVEDFAHSLRLNPNNA--S 683

Query: 352 HIYS 355
             YS
Sbjct: 684 AFYS 687



 Score = 53.5 bits (127), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 49/193 (25%), Positives = 93/193 (48%), Gaps = 12/193 (6%)

Query: 117 AIEDLTQLVEDTSVDPKIKVNAHIKRAVVHLHAASDFTKAFADLDEAEKVDPNVADSYYQ 176
           A+ED T+ +E   + P +  +A+  R   +L+ A+ + KA AD  E  ++DP    +Y  
Sbjct: 531 AMEDYTKAIE---LQPDL-ADAYTNRCSAYLNLAT-YDKAIADCTEGIRLDPKDEAAYNN 585

Query: 177 RGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQRHFVVHKMIVPGDRERVEQSLKEFRN 236
           R   Y    Q+++A  +   TI LN N   A + R          GD++    +L++F  
Sbjct: 586 RCVAYLNLKQFQKASEDCSLTIGLNGNNPKAYSNRGLARS---ASGDKQ---GALEDFTQ 639

Query: 237 FVDTHSNVVEACTLFAQVLVDQEDFDGAEEYFNRSIRVDPENASLYVHRAMLMLQARGNV 296
            +  + +   A +    +  + +++  A E F  S+R++P NAS +  R ++  Q +   
Sbjct: 640 AIRLNPSDAVAYSNRGTIYSELKNYPLAVEDFAHSLRLNPNNASAFYSRGLVRRQLKDRT 699

Query: 297 DEAIKLIEKAISI 309
             AI+  +KA ++
Sbjct: 700 G-AIEDFQKAATL 711



 Score = 46.6 bits (109), Expect = 0.039,   Method: Compositional matrix adjust.
 Identities = 50/208 (24%), Positives = 85/208 (40%), Gaps = 9/208 (4%)

Query: 321 GTIEVQRGRLEEAVKCFNKALPLARDEAELSHIYS-LRDAAIAQMKVCERYNIKKKVSPR 379
           G  + Q+G    A+  + +A+ L   +AE  +  +  R    A  +  E Y    KV+P 
Sbjct: 349 GVTKAQQGDTTGAIADYTQAIALNASDAESYYKRANARYDTGATEQAIEDYTQAIKVNPS 408

Query: 380 SQNITKNEKLAIKQLRENNDIIIRPADKGGKTVVMDKAD---YTQKMTSILNSNDYEIIP 436
                 N  +A   + +    +    +   + V ++ +D   Y+Q+  +  +  DY    
Sbjct: 409 HTKALYNRGMARLDIGDKRGAV----EDFTQVVRLNPSDGEAYSQRGLAYYDLGDYRTAI 464

Query: 437 GDPTKTIEESEKYGNLENESG-QKHAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCL 495
            D T+ I  S       +  G  + AA D T A AD  +A ++ P  A  YY RG+    
Sbjct: 465 EDYTQAIRLSPNDAKAYSNRGLARSAAGDKTGAMADFTQALQISPKQAGVYYSRGRARFN 524

Query: 496 FGQYEEALRNLDKTIALNPNFHVARAQR 523
              Y+ A+ +  K I L P+   A   R
Sbjct: 525 LADYQGAMEDYTKAIELQPDLADAYTNR 552



 Score = 41.6 bits (96), Expect = 1.0,   Method: Compositional matrix adjust.
 Identities = 67/270 (24%), Positives = 103/270 (38%), Gaps = 42/270 (15%)

Query: 258 QEDFDGAEEYFNRSIRVDPENASLYVHRAMLMLQARGNVDEAIKLIEKAISIDKSCMFAY 317
           Q D  GA   + ++I ++  +A  Y  RA       G  ++AI+   +AI ++ S   A 
Sbjct: 355 QGDTTGAIADYTQAIALNASDAESYYKRANARYDT-GATEQAIEDYTQAIKVNPSHTKAL 413

Query: 318 ETLGTIEVQRGRLEEAVKCFNKALPLARDEAELSHIYSLRDAAIAQMK----VCERYNIK 373
              G   +  G    AV+ F + + L   + E    YS R  A   +       E Y   
Sbjct: 414 YNRGMARLDIGDKRGAVEDFTQVVRLNPSDGE---AYSQRGLAYYDLGDYRTAIEDYTQA 470

Query: 374 KKVSPRSQNITKNEKLAIKQLRENNDIIIRPADKGGKTVVMDKADYTQKMTSILNSNDYE 433
            ++SP       N  LA            R A  G KT  M  AD+TQ +         +
Sbjct: 471 IRLSPNDAKAYSNRGLA------------RSA-AGDKTGAM--ADFTQAL---------Q 506

Query: 434 IIPGDPTKTIEESEKYGNLENESGQKHAASDFTKAFADLDEAEKVDPNVADSYYQRGQIY 493
           I P              NL +  G   A  D+TKA        ++ P++AD+Y  R   Y
Sbjct: 507 ISPKQAGVYYSRGRARFNLADYQG---AMEDYTKAI-------ELQPDLADAYTNRCSAY 556

Query: 494 CLFGQYEEALRNLDKTIALNPNFHVARAQR 523
                Y++A+ +  + I L+P    A   R
Sbjct: 557 LNLATYDKAIADCTEGIRLDPKDEAAYNNR 586


>gi|320580866|gb|EFW95088.1| hypothetical protein HPODL_3460 [Ogataea parapolymorpha DL-1]
          Length = 595

 Score = 67.0 bits (162), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 62/284 (21%), Positives = 127/284 (44%), Gaps = 17/284 (5%)

Query: 98  ALARLLRATVYIFTSQSTKAIEDLTQLVEDTSVDPKIKVNAHIKRAVVHLHAASDFTKAF 157
           ALA   + T      +S  A+ +  + +   S+ P+ +   H+   +V+     DF  A 
Sbjct: 311 ALAYEYKGTFDFLKGESESAVSNFNKAL---SLAPRCRT--HVLLGLVNADKG-DFASAD 364

Query: 158 ADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQRHFVVHK 217
            ++ +A K++P   D YY  GQ++ L G  ++A  N +K+   NP       Q   + ++
Sbjct: 365 EEIGKAIKMNPEDPDIYYHYGQLFYLMGDLDKAKDNFEKSKLYNPENVFGHIQLACIAYR 424

Query: 218 MIVPGDRERVEQSLKEFRNFVDTHSNVVEACTLFAQVLVDQEDFDGAEEYFNRSIRVDPE 277
               G+    ++  +E +    T   V      + ++L D++D+  A + F+ + R+   
Sbjct: 425 K---GESATCDELFREAKRKFPTSPEVP---NYYGEILFDRQDYAAAAKQFDTAARLQEV 478

Query: 278 NASLYVHRAML-----MLQARGNVDEAIKLIEKAISIDKSCMFAYETLGTIEVQRGRLEE 332
             +  +    L     + Q   ++    +L++ A  +D     A   LG I +Q  ++++
Sbjct: 479 LPTFNIGALPLINKSAIFQVNKDIAGCEQLLKTACELDPKSEVARINLGQIYLQAQKVKD 538

Query: 333 AVKCFNKALPLARDEAELSHIYSLRDAAIAQMKVCERYNIKKKV 376
           A++ F +A  L+R   +     SL +A+  Q+K+ E   +  KV
Sbjct: 539 AIELFEEACRLSRSNDDRVQAISLMEASKIQLKIKEDPILSAKV 582


>gi|145500066|ref|XP_001436017.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
 gi|124403154|emb|CAK68620.1| unnamed protein product [Paramecium tetraurelia]
          Length = 381

 Score = 67.0 bits (162), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 65/278 (23%), Positives = 128/278 (46%), Gaps = 16/278 (5%)

Query: 252 AQVLVDQEDFDGAEEYFNRSIRVDPENASLYVHRAMLMLQARGNVDEAIKLIEKAISIDK 311
           A  L+D +    A  +F+ +I+ +P+NA  Y ++A + L     + EA++  + AIS D 
Sbjct: 62  ANTLIDLDRPHEALTFFDYAIKKNPQNAGYYYNKA-ITLHEMSRLWEALEYYDLAISKDH 120

Query: 312 SCMFAYETLGTIEVQRGRLEEAVKCFNKALPLARDEAELSHIYSLRDAAIAQMKVCE--- 368
           +    Y    ++  +  RL+EA+KC+++A+ +    A+    Y+ +   +AQ+K  E   
Sbjct: 121 NNADYYNNKASVLHELNRLDEALKCYDQAIKINPKYADY---YNNKANTLAQLKRFEEAQ 177

Query: 369 -RYNIKKKVSPRSQNITKNEKLAIKQLRENNDIIIRPADKGGKTVVM------DKADYTQ 421
             Y+    + P +     N+ + +   + N     +  ++  K VV       +K  Y +
Sbjct: 178 NHYDKALSIDPENSEYYNNKGITVINQQANTLFECKEYEQALKNVVAAIQRNPEKEIYFK 237

Query: 422 KMTSILNS-NDYEIIPGDPTKTIEESEKYGNLENESG-QKHAASDFTKAFADLDEAEKVD 479
              + L   N +E         I+++ + G+   + G   H  + + +A    D+  + +
Sbjct: 238 VQANTLQKMNRFEESLEQSECAIQKNPQNGDNYRQKGFALHLLNRYQEALEYYDQGIEKN 297

Query: 480 PNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFH 517
           P  ++ YY +    C   +YEEAL N D +I  NP F+
Sbjct: 298 PENSEQYYYKAFTLCQMNRYEEALENCDYSIQKNPEFY 335



 Score = 41.2 bits (95), Expect = 1.4,   Method: Compositional matrix adjust.
 Identities = 22/75 (29%), Positives = 36/75 (48%), Gaps = 5/75 (6%)

Query: 147 LHAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHV 206
           LH  + + +A    D+  + +P  ++ YY +    C   +YEEAL N D +I  NP F+ 
Sbjct: 277 LHLLNRYQEALEYYDQGIEKNPENSEQYYYKAFTLCQMNRYEEALENCDYSIQKNPEFY- 335

Query: 207 ARAQRHFVVHKMIVP 221
                H+ +   I P
Sbjct: 336 ----DHYYIKASIQP 346


>gi|407263816|ref|XP_003084948.2| PREDICTED: tetratricopeptide repeat protein 6 [Mus musculus]
          Length = 926

 Score = 67.0 bits (162), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 56/236 (23%), Positives = 114/236 (48%), Gaps = 10/236 (4%)

Query: 100 ARLLRATVYIFTSQSTKAIEDLTQLVEDTSVDPKIKVNAHIKRAVVHLHAASDFTKAFAD 159
           A L R   Y    + +KAI +  + ++   + P+  V A+I R V+  +  + +     D
Sbjct: 479 AYLSRVAYYGLKGRYSKAILNCNEAIK---LYPE-SVRAYICRGVLKYYNRT-YKLGITD 533

Query: 160 LDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQRHFVVHKMI 219
           L  A K+D N   +YY R   Y   G+++ ALR+    + L+   ++A    + ++++ +
Sbjct: 534 LSTAIKMDKNNYTAYYNRALCYTKIGEHQMALRDYGIVLLLDAGENIA---LNTLINRGL 590

Query: 220 VPGDRERVEQSLKEFRNFVDTHSNVVEACTLFAQVLVDQEDFDGAEEYFNRSIRVDPENA 279
           +  + ++   +L++F+         V  C   A      ++F+GA E+F R+I+++P   
Sbjct: 591 IYTELKQYGFALEDFKQAALMSGTSVSLCQATATCHHRIKEFEGAVEFFTRAIKINPHYV 650

Query: 280 SLYVHR--AMLMLQARGNVDEAIKLIEKAISIDKSCMFAYETLGTIEVQRGRLEEA 333
             Y+ R  + +       + +A K   KA+ +D SC+ A  +LG     +G+ ++A
Sbjct: 651 DAYIGRGNSYMEYSQEDAMIQAQKDFLKALHLDPSCLKARISLGYNLQAQGKFQKA 706



 Score = 42.4 bits (98), Expect = 0.73,   Method: Compositional matrix adjust.
 Identities = 74/369 (20%), Positives = 142/369 (38%), Gaps = 43/369 (11%)

Query: 171 ADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQRHFVVHKMIVPGDRERVEQS 230
           +D+ ++RG  Y   G +  A+ +    + L+P    AR  R     K      R   +Q+
Sbjct: 236 SDALWKRGMFYFENGNWIGAVYDFTSLLKLDPYNSKARTYRGRAYFK------RNLYKQA 289

Query: 231 LKEFRNFVDTHSNVVEACTLFAQVLVDQEDFDGAEEY-FNRSIRVDPENASLYVHRAMLM 289
            ++F   +    N   A    A +      +   ++Y  +  I + P      +  A L+
Sbjct: 290 TQDFSAAIHLDPNNWVALYYRACLFRKSSPYRALQDYSVSGIIEMSP------IQEA-LI 342

Query: 290 LQARGNVDEAIKLIEKAISIDKSCMFAYETLGTIEVQRGRLEEAVKCFNKALPLARDEAE 349
                N D+AI ++E  I+  K  +  Y  L   +++  R++E+V+ F KAL L     +
Sbjct: 343 YSFCENHDKAIHILEGVIA-SKPDISTYALLAKAQMKAKRIKESVRLFKKALELYTFSDK 401

Query: 350 LSHIYSLRDAAIAQMKVC-----------ERYNIKKKVSPRSQNITKNEKLAIKQLRENN 398
                S+    +  + +C           E +    K +P       +  L   +L + N
Sbjct: 402 GPVATSVSAECLYNLGLCYMEEGNFQMAFESFTKAVKANPEFAEAFYHRGLCKVKLNKQN 461

Query: 399 DIIIRPADKGGKTVVMDKADYTQKMTSILNSNDYEIIPGDPTKTIEESEKYGNLENESGQ 458
            I+        + + ++   Y   ++ +     Y  + G  +K I    +   L  ES +
Sbjct: 462 SIL-----DFNRALTLNPKHYQAYLSRV----AYYGLKGRYSKAILNCNEAIKLYPESVR 512

Query: 459 KHAASDFTKAF--------ADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTI 510
            +      K +         DL  A K+D N   +YY R   Y   G+++ ALR+    +
Sbjct: 513 AYICRGVLKYYNRTYKLGITDLSTAIKMDKNNYTAYYNRALCYTKIGEHQMALRDYGIVL 572

Query: 511 ALNPNFHVA 519
            L+   ++A
Sbjct: 573 LLDAGENIA 581



 Score = 40.8 bits (94), Expect = 2.0,   Method: Compositional matrix adjust.
 Identities = 54/243 (22%), Positives = 102/243 (41%), Gaps = 20/243 (8%)

Query: 104 RATVYIFTSQSTKAIEDLTQ--LVEDTSVDPKIKVNAHIKRAVVHLHAASDFTKAFADLD 161
           R  +Y    Q   A+ED  Q  L+  TSV      +     A  H H   +F  A     
Sbjct: 588 RGLIYTELKQYGFALEDFKQAALMSGTSV------SLCQATATCH-HRIKEFEGAVEFFT 640

Query: 162 EAEKVDPNVADSYYQRGQIYCLFGQYE---EALRNLDKTIALNPNFHVARAQRHFVVHKM 218
            A K++P+  D+Y  RG  Y  + Q +   +A ++  K + L+P+   AR    + +   
Sbjct: 641 RAIKINPHYVDAYIGRGNSYMEYSQEDAMIQAQKDFLKALHLDPSCLKARISLGYNLQA- 699

Query: 219 IVPGDRERVEQSLKEFRNFVDTHSNVVEACTLFAQVLVDQEDFDGAEEYFNRSIRVDPEN 278
                + + +++   F   ++++     A    A V +   ++  A +  N +I+++   
Sbjct: 700 -----QGKFQKAWIHFTVGIESNPKSYLAYEGRAVVCLQMSNYFAAMQDINCAIKIN-ST 753

Query: 279 ASLYVHRAMLMLQARGNVDEAIKLIEKAISIDKSCMFAYETLGTIEVQRGRLEEAVKCFN 338
           A    +R ++  +  G    A+   + AIS++ S   AY   G I +   +  +A   F+
Sbjct: 754 AEFLTNRGVIH-EFMGQQQSAMADYQAAISLNPSYSLAYFNAGNIYLHHRQFSQASDYFS 812

Query: 339 KAL 341
            AL
Sbjct: 813 TAL 815



 Score = 40.0 bits (92), Expect = 3.0,   Method: Compositional matrix adjust.
 Identities = 57/240 (23%), Positives = 99/240 (41%), Gaps = 45/240 (18%)

Query: 80  AIRHCTEEIESTSSNHTKALARLLRATVYIFTSQSTKAIEDLTQLVEDTSVDPKIKVNAH 139
           A  H T  IES   ++   LA   RA V +  S    A++D         ++  IK+N+ 
Sbjct: 706 AWIHFTVGIESNPKSY---LAYEGRAVVCLQMSNYFAAMQD---------INCAIKINST 753

Query: 140 IK----RAVVHLHAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLD 195
            +    R V+H         A AD   A  ++P+ + +Y+  G IY    Q+ +A     
Sbjct: 754 AEFLTNRGVIHEFMGQQ-QSAMADYQAAISLNPSYSLAYFNAGNIYLHHRQFSQASDYFS 812

Query: 196 KTIALNPNFHVARAQRHFVVHKMIVPGDRERVEQSLKEFRNFVDTHSNVVEACTLFAQVL 255
             +  NP    A      ++++ +     ++ E++ K+F       S  +E C  +A + 
Sbjct: 813 TALKFNPENEYA------LMNRAVTNSVLKKYEEAEKDF-------SCAMERCPHWAALY 859

Query: 256 VDQEDF-------DGAEEYFNRSIRVDPENASLYVHRAMLMLQARGNVDEAIKLIEKAIS 308
            ++  F         AEE     + + P+ A +Y  RA    Q RG +     LI +A+S
Sbjct: 860 FNRASFYVYLKKYKLAEEDLGIGLSLKPDEAIMYNLRA----QVRGKMG----LIAEAMS 911



 Score = 39.3 bits (90), Expect = 6.0,   Method: Compositional matrix adjust.
 Identities = 44/175 (25%), Positives = 74/175 (42%), Gaps = 9/175 (5%)

Query: 169 NVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQRHFVVHKMIVPGDRERVE 228
           N+A  Y +RG IY   G+ + A+ +L + I   P F  A   RHF+         +++V 
Sbjct: 100 NLAFVYCRRGAIYRKLGKLQSAMNDLQEAIFQEPFFLNAYWHRHFIYL------FQDKVN 153

Query: 229 QSLKEFRNFVDTHSNVVEACTLFAQVLVDQEDFDGAEEYFNRSIRVDPENASLYVHRAML 288
            +L +       + N  EA    A++   ++D   A   ++++I+  P++A LY  R  +
Sbjct: 154 DALDDLNFITKYNKNHAEAYLSKAEIF-REKDITLAILNYSQAIKCRPKDADLYFKRGEM 212

Query: 289 MLQARGNVDEAIKLIEKAISIDKSCMFAYETLGTIEVQRGRLEEAVKCFNKALPL 343
               + N   AI    K I  ++    A    G    + G    AV  F   L L
Sbjct: 213 Y--EKTNKVLAIDDYSKCIYYNRKRSDALWKRGMFYFENGNWIGAVYDFTSLLKL 265


>gi|356960818|ref|ZP_09063800.1| TPR repeat-containing protein [gamma proteobacterium SCGC
           AAA001-B15]
          Length = 286

 Score = 67.0 bits (162), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 50/217 (23%), Positives = 103/217 (47%), Gaps = 12/217 (5%)

Query: 132 PKIKVNAHIKRAVVHLHAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEAL 191
           P+ ++N+     ++ L++     +A   ++   K  PN    Y   G  Y   G+ +EA+
Sbjct: 7   PQTEINS-----LIALYSNGQIQEALDTVETLTKDYPNEPLLYNISGICYKTIGKLDEAV 61

Query: 192 RNLDKTIALNPNFHVARAQRHFVVHKMIVPGDRERVEQSLKEFRNFVDTHSNVVEACTLF 251
           ++ +K +A+ P++    A+ H+ +   +   D  +++ ++K ++  ++   +   AC   
Sbjct: 62  KSFEKALAIKPDY----AEVHYNLG--LTLQDLGQLDAAVKCYKKALEIKPDYANACNNL 115

Query: 252 AQVLVDQEDFDGAEEYFNRSIRVDPENASLYVHRAMLMLQARGNVDEAIKLIEKAISIDK 311
              L D    D A + + ++I + P+    Y +      Q  G +D A+K  EKA++I  
Sbjct: 116 GVTLQDLGQLDAAVKSYEQAIAIKPDFVEAYYNLGG-TFQELGQMDAAVKCYEKALAIKP 174

Query: 312 SCMFAYETLGTIEVQRGRLEEAVKCFNKALPLARDEA 348
               A+  LG +    G+L  AVKC+ +AL +  + A
Sbjct: 175 DYAEAHYNLGNVLKNLGQLNGAVKCYEQALAIKPEYA 211



 Score = 43.9 bits (102), Expect = 0.22,   Method: Compositional matrix adjust.
 Identities = 53/243 (21%), Positives = 94/243 (38%), Gaps = 37/243 (15%)

Query: 286 AMLMLQARGNVDEAIKLIEKAISIDKSCMFAYETLGTIEVQRGRLEEAVKCFNKALPLAR 345
           +++ L + G + EA+  +E       +    Y   G      G+L+EAVK F KAL +  
Sbjct: 13  SLIALYSNGQIQEALDTVETLTKDYPNEPLLYNISGICYKTIGKLDEAVKSFEKALAIKP 72

Query: 346 DEAELSHIYSLRDAAIAQMKVCER-YNIKKKVSPRSQNITKNEKLAIKQLRENNDIIIRP 404
           D AE+ +   L    + Q+    + Y    ++ P   N   N  + ++ L +     +  
Sbjct: 73  DYAEVHYNLGLTLQDLGQLDAAVKCYKKALEIKPDYANACNNLGVTLQDLGQ-----LDA 127

Query: 405 ADKGGKTVVMDKADYTQKMTSILNSNDYEIIPGDPTKTIEESEKYGNLENESGQKHAASD 464
           A K  +  +  K D+                       +E     G    E GQ  AA  
Sbjct: 128 AVKSYEQAIAIKPDF-----------------------VEAYYNLGGTFQELGQMDAAVK 164

Query: 465 -FTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQR 523
            + KA A       + P+ A+++Y  G +    GQ   A++  ++ +A+ P +  A   R
Sbjct: 165 CYEKALA-------IKPDYAEAHYNLGNVLKNLGQLNGAVKCYEQALAIKPEYANAYFNR 217

Query: 524 HFV 526
             V
Sbjct: 218 GHV 220


>gi|27375838|ref|NP_767367.1| hypothetical protein blr0727 [Bradyrhizobium japonicum USDA 110]
 gi|27348976|dbj|BAC45992.1| blr0727 [Bradyrhizobium japonicum USDA 110]
          Length = 370

 Score = 67.0 bits (162), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 75/327 (22%), Positives = 143/327 (43%), Gaps = 20/327 (6%)

Query: 68  AKRAFEHEDYLTAIRHCTEEIESTSSNHTKALARLLRATVYIFTSQSTKAIEDLTQLVED 127
           A  A  H D  +  R   E+ E   ++ T A+A  LR   +       +A ED +  +  
Sbjct: 19  AATAMAHADEASNDRVIAEKTEIIVADPTNAVAYELRGEAWYMKRDKDRAFEDCSAAIR- 77

Query: 128 TSVDPKIKVNAHIKRAVVHLHAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQY 187
             +DP     A+  R   +  A  D  +A AD +EA ++DP    SY  R Q Y     +
Sbjct: 78  --IDPNFG-RAYNCRGRAY-SAKGDRDRAMADYNEAIRLDPGYGPSYTSRAQEYFNRRDF 133

Query: 188 EEALRNLDKTIALNPNFHVARAQRHF-VVHKMIVPGDRERVEQSLKEFRNFVDTHSNVVE 246
           + A+    + I  NP       Q +F  V +      +   + ++ ++   +  +     
Sbjct: 134 DLAIAGFTEAIERNPK------QAYFATVMRGEAYAAKGDTDHAVADYTEAMQRNPAAAW 187

Query: 247 ACTLFAQVLVDQEDFDGAEEYFNRSIRVDPENASLYVHRAMLMLQARGNVDEAIKLIEKA 306
              L + V  D+ + D A +  N ++R++P +A  +  RA+++++ + + D AI+  ++ 
Sbjct: 188 PYELRSAVHFDKGEIDEALDDCNSAVRLEPGSAGGHYCRAVVLVK-KDDPDGAIREFDEV 246

Query: 307 ISIDKSCMFAYETLGTIEVQRGRLEEAVKCFNKALPLARDEAELSHIYSLRDAAIAQMKV 366
             I  + + AY        ++G  + A+  F++A+ L   +   S  Y+ R AA   M  
Sbjct: 247 TRIAPAFVKAYLARAVAWHKKGDDKHAIADFDEAIRL---QPGNSTAYNNRAAAFRDMGQ 303

Query: 367 CER----YNIKKKVSPRSQNITKNEKL 389
            +R    YN   ++ P++Q++  N  L
Sbjct: 304 HDRALADYNEALRLDPKNQDVLANRGL 330



 Score = 44.7 bits (104), Expect = 0.12,   Method: Compositional matrix adjust.
 Identities = 29/96 (30%), Positives = 47/96 (48%), Gaps = 10/96 (10%)

Query: 433 EIIPGDPTKTIEESEKYGNLENESGQKHAASDFTKAFADLDEAEKVDPNVADSYYQRGQI 492
           EII  DPT  +        L  E+   +   D  +AF D   A ++DPN   +Y  RG+ 
Sbjct: 40  EIIVADPTNAVAYE-----LRGEAW--YMKRDKDRAFEDCSAAIRIDPNFGRAYNCRGRA 92

Query: 493 YCLFGQYEEALRNLDKTIALNPNF---HVARAQRHF 525
           Y   G  + A+ + ++ I L+P +   + +RAQ +F
Sbjct: 93  YSAKGDRDRAMADYNEAIRLDPGYGPSYTSRAQEYF 128


>gi|434388239|ref|YP_007098850.1| trypsin-like serine protease with C-terminal PDZ domain
           [Chamaesiphon minutus PCC 6605]
 gi|428019229|gb|AFY95323.1| trypsin-like serine protease with C-terminal PDZ domain
           [Chamaesiphon minutus PCC 6605]
          Length = 549

 Score = 67.0 bits (162), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 58/228 (25%), Positives = 106/228 (46%), Gaps = 13/228 (5%)

Query: 121 LTQLVEDTSVDPKIKVNAHIKRAVVHLHAASDFTKAFADLDEAEKVDPNVADSYYQRGQI 180
           LT L    +++P+  VNA+I R +V     +D   A ADL+ A  +D  VA++Y  RG +
Sbjct: 266 LTDLDRAIALNPQ-SVNAYIGRGMVKYQQLNDPQGALADLNRAIAIDSKVANAYNNRGVL 324

Query: 181 YCL-FGQYEEALRNLDKTIALNPNFHVARAQRHFVVHKMIVPGDRERVEQSLKEFRNFVD 239
                      L +LD++IA++P F +A   R  + ++ +       V+ +L +    + 
Sbjct: 325 KAQKLNDARGGLADLDRSIAIDPKFALAYNNRGNLKYQQL-----NDVQGALADLDRSIA 379

Query: 240 THSNVVEACTLFAQVLVDQE---DFDGAEEYFNRSIRVDPENASLYVHRAMLMLQARGNV 296
               V  A T + + ++  E   D  G     +R+I ++P+    Y +R  L  Q   +V
Sbjct: 380 LDPQV--ANTYYNRAVLKSEKLNDVRGTLADLDRAIALNPKYTFFYYYRGNLKAQKLNDV 437

Query: 297 DEAIKLIEKAISIDKSCMFAYETLGTIEVQR-GRLEEAVKCFNKALPL 343
             AI  + +AI+++     AY   G ++ Q       A+   N+A+ +
Sbjct: 438 QGAITDLSQAIALNPKFANAYNNRGFLKAQNLNDFSGALADLNRAISI 485



 Score = 52.4 bits (124), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 46/200 (23%), Positives = 94/200 (47%), Gaps = 10/200 (5%)

Query: 148 HAASDFTKAFADLDEAEKVDPNVADSYYQRGQI-YCLFGQYEEALRNLDKTIALNPNFHV 206
           +A  D+     DLD A  ++P   ++Y  RG + Y      + AL +L++ IA++     
Sbjct: 257 YATGDYRGTLTDLDRAIALNPQSVNAYIGRGMVKYQQLNDPQGALADLNRAIAIDSKVAN 316

Query: 207 ARAQRHFVVHKMI--VPGDRERVEQSLKEFRNFVDTHSNVVEACTLFAQVLVDQEDFDGA 264
           A   R  +  + +    G    +++S+     F   ++N       + Q+     D  GA
Sbjct: 317 AYNNRGVLKAQKLNDARGGLADLDRSIAIDPKFALAYNN--RGNLKYQQL----NDVQGA 370

Query: 265 EEYFNRSIRVDPENASLYVHRAMLMLQARGNVDEAIKLIEKAISIDKSCMFAYETLGTIE 324
               +RSI +DP+ A+ Y +RA+L  +   +V   +  +++AI+++    F Y   G ++
Sbjct: 371 LADLDRSIALDPQVANTYYNRAVLKSEKLNDVRGTLADLDRAIALNPKYTFFYYYRGNLK 430

Query: 325 VQR-GRLEEAVKCFNKALPL 343
            Q+   ++ A+   ++A+ L
Sbjct: 431 AQKLNDVQGAITDLSQAIAL 450



 Score = 50.1 bits (118), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 59/247 (23%), Positives = 102/247 (41%), Gaps = 22/247 (8%)

Query: 260 DFDGAEEYFNRSIRVDPENASLYVHRAMLMLQARGNVDEAIKLIEKAISIDKSCMFAYET 319
           D+ G     +R+I ++P++ + Y+ R M+  Q   +   A+  + +AI+ID     AY  
Sbjct: 261 DYRGTLTDLDRAIALNPQSVNAYIGRGMVKYQQLNDPQGALADLNRAIAIDSKVANAYNN 320

Query: 320 LGTIEVQ-----RGRLEEAVK--CFNKALPLARDEAELSHIYSLRDAAIAQMKVCERYNI 372
            G ++ Q     RG L +  +    +    LA +         L D   A   +     +
Sbjct: 321 RGVLKAQKLNDARGGLADLDRSIAIDPKFALAYNNRGNLKYQQLNDVQGALADLDRSIAL 380

Query: 373 KKKVSPRSQN--ITKNEKLAIKQLRENNDIIIRPADKGGKTVVMDKADYTQKMTSILNS- 429
             +V+    N  + K+EKL        ND+    AD      +  K  +       L + 
Sbjct: 381 DPQVANTYYNRAVLKSEKL--------NDVRGTLADLDRAIALNPKYTFFYYYRGNLKAQ 432

Query: 430 --NDYEIIPGDPTKTIEESEKYGNLENESG--QKHAASDFTKAFADLDEAEKVDPNVADS 485
             ND +    D ++ I  + K+ N  N  G  +    +DF+ A ADL+ A  +DP  A +
Sbjct: 433 KLNDVQGAITDLSQAIALNPKFANAYNNRGFLKAQNLNDFSGALADLNRAISIDPQYASA 492

Query: 486 YYQRGQI 492
           Y+ R  I
Sbjct: 493 YFNRAMI 499



 Score = 46.2 bits (108), Expect = 0.048,   Method: Compositional matrix adjust.
 Identities = 57/241 (23%), Positives = 97/241 (40%), Gaps = 31/241 (12%)

Query: 162 EAEKVDPNV---ADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQRHFVVHKM 218
           +   + PN    AD Y+         G Y   L +LD+ IALNP    A   R  V ++ 
Sbjct: 234 QVATIPPNTSPRADDYFASAAQKYATGDYRGTLTDLDRAIALNPQSVNAYIGRGMVKYQQ 293

Query: 219 IVPGDRERVEQSLKEFRNFVDTHSNVVEA----CTLFAQVLVDQEDFDGAEEYFNRSIRV 274
           +        + +L +    +   S V  A      L AQ L    D  G     +RSI +
Sbjct: 294 L-----NDPQGALADLNRAIAIDSKVANAYNNRGVLKAQKL---NDARGGLADLDRSIAI 345

Query: 275 DPENASLYVHRAMLMLQARGNVDEAIKLIEKAISIDKSCMFAYETLGTIEVQ-----RGR 329
           DP+ A  Y +R  L  Q   +V  A+  ++++I++D      Y     ++ +     RG 
Sbjct: 346 DPKFALAYNNRGNLKYQQLNDVQGALADLDRSIALDPQVANTYYNRAVLKSEKLNDVRGT 405

Query: 330 LEEAVKCFNKALPLARDEAELSHIYSLRDAAIAQMKVCERYNIKKKVSPRSQNITKNEKL 389
           L +     ++A+ L     + +  Y  R      +K  +  +++  ++  SQ I  N K 
Sbjct: 406 LAD----LDRAIAL---NPKYTFFYYYR----GNLKAQKLNDVQGAITDLSQAIALNPKF 454

Query: 390 A 390
           A
Sbjct: 455 A 455



 Score = 42.7 bits (99), Expect = 0.44,   Method: Compositional matrix adjust.
 Identities = 23/64 (35%), Positives = 36/64 (56%), Gaps = 4/64 (6%)

Query: 117 AIEDLTQLVEDTSVDPKIKVNAHIKRAVVHLHAASDFTKAFADLDEAEKVDPNVADSYYQ 176
           AI DL+Q +   +++PK   NA+  R  +     +DF+ A ADL+ A  +DP  A +Y+ 
Sbjct: 440 AITDLSQAI---ALNPKF-ANAYNNRGFLKAQNLNDFSGALADLNRAISIDPQYASAYFN 495

Query: 177 RGQI 180
           R  I
Sbjct: 496 RAMI 499



 Score = 40.8 bits (94), Expect = 1.9,   Method: Compositional matrix adjust.
 Identities = 21/55 (38%), Positives = 30/55 (54%), Gaps = 1/55 (1%)

Query: 463 SDFTKAFADLDEAEKVDPNVADSYYQRGQIYC-LFGQYEEALRNLDKTIALNPNF 516
           +D   A ADLD +  +DP VA++YY R  +           L +LD+ IALNP +
Sbjct: 365 NDVQGALADLDRSIALDPQVANTYYNRAVLKSEKLNDVRGTLADLDRAIALNPKY 419


>gi|218783089|ref|YP_002434407.1| hypothetical protein Dalk_5269 [Desulfatibacillum alkenivorans
           AK-01]
 gi|218764473|gb|ACL06939.1| TPR repeat-containing protein [Desulfatibacillum alkenivorans
           AK-01]
          Length = 816

 Score = 67.0 bits (162), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 95/421 (22%), Positives = 174/421 (41%), Gaps = 53/421 (12%)

Query: 108 YIFTSQSTKAIEDLTQLVEDTSVDPKIKVNAHIKRAVVHLHAASDFTKAFADLDEAEKVD 167
           Y+     T+A+    + +E    DP    N    +  + L       +A A++ EA K D
Sbjct: 435 YMAKRMYTEAVTAFEKTLELDPGDPDALNNLACAQVSLGL-----LDEATANVREALKTD 489

Query: 168 PNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQRHFVVHKMIVP-GDRER 226
           PN A +YY  G       +  EA+   D  + L P+F +A+    ++++KM  P   RER
Sbjct: 490 PNSAVAYYNLGNAMAKSNRLSEAVMYYDMAVGLKPDFPMAQCNLGYLLYKMGNPEKARER 549

Query: 227 VEQSLKEFRNFVDTHSNVVEACTLFAQVLVDQEDFDGAEEYFNRSIRVDPENASLYVHRA 286
           +  +L      +D  + +++  T+ A VL  + D + A  ++ +++ ++P+ + ++    
Sbjct: 550 LSIALA-----LDPENALIQ--TVMANVLSAEGDLEEARVHYQKALELEPDQSQIHYAYG 602

Query: 287 MLMLQARGNVDEAIKLIEKAISIDKSCMFAYETLGTIEVQRGRLEEAVKCFNKALPLARD 346
            L L   G VD+A +    A+  D      +  +     ++GR  EA+  ++KAL L   
Sbjct: 603 NL-LSKLGEVDQAEEQHRAALENDPEDPRFHANMANTLSRQGRYGEAMTHYHKALELEPG 661

Query: 347 EAELSHIYSLRDAAIA-QMKVCERYNIKKKVSPRSQNITKNEKLAIKQLRENNDIIIRPA 405
            A    I++    A+A Q KV E                 + K A+K   +       PA
Sbjct: 662 NA---MIHTNMGIALADQGKVDEA--------------ASHFKAAMKSQPD-----FAPA 699

Query: 406 DKGGKTVVMDKADYTQKMTSILNSNDYEIIPGDPTKTIEESEKYGNLENESGQKHA-ASD 464
                 V+  +  + + +                +K +E    YG    E+G   A    
Sbjct: 700 YYNMGYVLAKQGRHQEALEYF-------------SKAVEIKPDYGQAYYEAGNSLAHTGH 746

Query: 465 FTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQRH 524
             +A     +A + +P+     +  G +Y   G+ E A+   +K +AL PN+H   A +H
Sbjct: 747 LNEAVQSYKKALEQEPDNPKILHNLGIVYAQGGELETAVDYFEKALALQPNYH--EAAKH 804

Query: 525 F 525
            
Sbjct: 805 L 805



 Score = 40.8 bits (94), Expect = 2.1,   Method: Compositional matrix adjust.
 Identities = 67/354 (18%), Positives = 133/354 (37%), Gaps = 50/354 (14%)

Query: 168 PNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPN-----FHVARAQRHFVVHKMIVPG 222
           P+    +Y  G  Y     Y EA+   +KT+ L+P       ++A AQ    +       
Sbjct: 422 PDSPRPWYNLGNAYMAKRMYTEAVTAFEKTLELDPGDPDALNNLACAQVSLGL------- 474

Query: 223 DRERVEQSLKEFRNFVDTHSNVVEACTLFAQVLVDQEDFDGAEEYFNRSIRVDPENASLY 282
               ++++    R  + T  N   A       +        A  Y++ ++ + P+     
Sbjct: 475 ----LDEATANVREALKTDPNSAVAYYNLGNAMAKSNRLSEAVMYYDMAVGLKPDFPMAQ 530

Query: 283 VHRAMLMLQARGNVDEAIKLIEKAISIDKSCMFAYETLGTIEVQRGRLEEAVKCFNKALP 342
            +   L+ +  GN ++A + +  A+++D         +  +    G LEEA   + KAL 
Sbjct: 531 CNLGYLLYK-MGNPEKARERLSIALALDPENALIQTVMANVLSAEGDLEEARVHYQKALE 589

Query: 343 LARDEAELSHIYSLRDAAIAQMKVCERYNIKKKVSPRSQNITKNEKLAIKQLRENNDIII 402
           L  D++++ + Y                N+  K+    Q   +  + A++   E+     
Sbjct: 590 LEPDQSQIHYAYG---------------NLLSKLGEVDQ-AEEQHRAALENDPEDPRFHA 633

Query: 403 RPADKGGKTVVMDKADYTQKMTSILNSNDYEIIPGDPTKTIEESEKYGNLENESGQKHAA 462
             A+   +     +  Y + MT    + + E     P   +  +     L ++     AA
Sbjct: 634 NMANTLSR-----QGRYGEAMTHYHKALELE-----PGNAMIHTNMGIALADQGKVDEAA 683

Query: 463 SDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNF 516
           S F  A        K  P+ A +YY  G +    G+++EAL    K + + P++
Sbjct: 684 SHFKAAM-------KSQPDFAPAYYNMGYVLAKQGRHQEALEYFSKAVEIKPDY 730


>gi|386401848|ref|ZP_10086626.1| putative O-linked N-acetylglucosamine transferase, SPINDLY family
           [Bradyrhizobium sp. WSM1253]
 gi|385742474|gb|EIG62670.1| putative O-linked N-acetylglucosamine transferase, SPINDLY family
           [Bradyrhizobium sp. WSM1253]
          Length = 708

 Score = 67.0 bits (162), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 64/250 (25%), Positives = 113/250 (45%), Gaps = 25/250 (10%)

Query: 124 LVEDTSVDPKIKVNAHIKRAVV------HLHAASDFTKAFADLDEAEKVDPNVADSYYQR 177
           L    +VDP+    AH+   V       H  A   + KA A         PN A +    
Sbjct: 80  LSRAVAVDPR-SAEAHMSLGVALNGLKRHNEARESYRKALA-------FRPNYALALSNL 131

Query: 178 GQIYCLFGQYEEALRNLDKTIALNPNFHVARAQRHFVVHKMIVPGDRERVEQSLKEFRNF 237
           G        Y+EAL + DK +A++     A   R + + ++         ++++      
Sbjct: 132 GNASAALELYQEALESYDKALAIDGKLSEAHNGRGWALCRL------RAYDEAIASLNRA 185

Query: 238 VDTHSNVVEACTLFAQVLVDQEDFDGAEEYFNRSIRVDPENASLYVHRAMLMLQARGNVD 297
           +    +   A +  A  L + + FD A    NR+I + P++A+ ++ RA ++L  R  V 
Sbjct: 186 LSIKPDYASALSTRAVALRELQRFDEAMADCNRAIALAPDDANGWLRRASILLLTR-QVA 244

Query: 298 EAIKLIEKAISIDKSCMFAYETLGTIEVQRGRLEEAVKCFNKALPLARDEAELSH-IYSL 356
           EA+   E A++ D     A+  LG      GR++EA+  F++AL +  D++ +S  I++L
Sbjct: 245 EALADCEMALATDPGFSQAHSLLGQCLAALGRVDEALASFDRALDIEPDQSTISSKIFTL 304

Query: 357 ---RDAAIAQ 363
               DA++AQ
Sbjct: 305 DFMADASVAQ 314


>gi|389693671|ref|ZP_10181765.1| TPR repeat-containing protein [Microvirga sp. WSM3557]
 gi|388587057|gb|EIM27350.1| TPR repeat-containing protein [Microvirga sp. WSM3557]
          Length = 287

 Score = 67.0 bits (162), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 58/225 (25%), Positives = 104/225 (46%), Gaps = 14/225 (6%)

Query: 104 RATVYIFTSQSTKAIEDLTQLVEDTSVDPKIKVNAHIKRAVVHLHAASDFTKAFADLDEA 163
           R   Y      + AI D T+ V+   +DP     A+  RA+  L   S   +A +D   +
Sbjct: 70  RGAAYARVGNYSSAIADFTKAVQ---LDPNY-APAYTNRALA-LRQTSRNDQALSDFTRS 124

Query: 164 EKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQRHFVVHKMIVPGD 223
            + DPN   +Y  R  +Y    QY+EAL +L+    L P    A   R  +  +  +   
Sbjct: 125 IQADPNYGPAYIGRANLYRAQNQYQEALADLNMATRLLPESAEALHSRGLLYQRQGMH-- 182

Query: 224 RERVEQSLKEFRNFVDTHSNVVEACTLFAQVLVDQEDFDGAEEYFNRSIRVDPENASLYV 283
               +Q++ +F   +D +  V        Q  V    FD A E FN ++ VD ++A+ + 
Sbjct: 183 ----QQAILDFDATIDRNPFVGAPYAARGQSFVATNQFDKAIEDFNAALNVDNKDANSWA 238

Query: 284 HRAMLMLQARGNVDEAIKLIEKAISIDKSCMFAYETLGTIEVQRG 328
            R  + L+ +G+  +A++  ++A+++D S   A +  G+ ++Q G
Sbjct: 239 WRG-VALERKGDRSQALESYQRALALDSSNSVARQ--GSSKLQGG 280



 Score = 55.8 bits (133), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 49/199 (24%), Positives = 81/199 (40%), Gaps = 7/199 (3%)

Query: 143 AVVHLHAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNP 202
           AVV        T   + L +  + +PN   +Y  RG  Y   G Y  A+ +  K + L+P
Sbjct: 36  AVVEEDTQGTSTVNISSLSDVIQRNPNDPSAYNTRGAAYARVGNYSSAIADFTKAVQLDP 95

Query: 203 NFHVARAQRHFVVHKMIVPGDRERVEQSLKEFRNFVDTHSNVVEACTLFAQVLVDQEDFD 262
           N+  A   R   + +        R +Q+L +F   +    N   A    A +   Q  + 
Sbjct: 96  NYAPAYTNRALALRQT------SRNDQALSDFTRSIQADPNYGPAYIGRANLYRAQNQYQ 149

Query: 263 GAEEYFNRSIRVDPENASLYVHRAMLMLQARGNVDEAIKLIEKAISIDKSCMFAYETLGT 322
            A    N + R+ PE+A   +H   L+ Q +G   +AI   +  I  +      Y   G 
Sbjct: 150 EALADLNMATRLLPESAEA-LHSRGLLYQRQGMHQQAILDFDATIDRNPFVGAPYAARGQ 208

Query: 323 IEVQRGRLEEAVKCFNKAL 341
             V   + ++A++ FN AL
Sbjct: 209 SFVATNQFDKAIEDFNAAL 227



 Score = 39.7 bits (91), Expect = 4.0,   Method: Compositional matrix adjust.
 Identities = 31/114 (27%), Positives = 57/114 (50%), Gaps = 5/114 (4%)

Query: 419 YTQKMTSILNSNDYEIIPGDPTKTIEESEKYGNLE-NESGQKHAASDFTKAFADLDEAEK 477
           YT +  ++  ++  +    D T++I+    YG      +    A + + +A ADL+ A +
Sbjct: 101 YTNRALALRQTSRNDQALSDFTRSIQADPNYGPAYIGRANLYRAQNQYQEALADLNMATR 160

Query: 478 VDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNF---HVARAQRHFVWT 528
           + P  A++ + RG +Y   G +++A+ + D TI  NP     + AR Q  FV T
Sbjct: 161 LLPESAEALHSRGLLYQRQGMHQQAILDFDATIDRNPFVGAPYAARGQ-SFVAT 213


>gi|452210866|ref|YP_007490980.1| GTP cyclohydrolase III (methanopterin) [Methanosarcina mazei Tuc01]
 gi|452100768|gb|AGF97708.1| GTP cyclohydrolase III (methanopterin) [Methanosarcina mazei Tuc01]
          Length = 398

 Score = 67.0 bits (162), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 52/207 (25%), Positives = 97/207 (46%), Gaps = 8/207 (3%)

Query: 137 NAHIKRAVVHLHAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDK 196
           NA   +A+ +L  A  + +A    D   K + N  +++  +G      G Y+EA+   DK
Sbjct: 154 NAWYGKAL-NLSQAGRYEEAVDAYDIVLKENSNYKEAWAGKGIALGQMGNYDEAIIAYDK 212

Query: 197 TIALNPNFHVARAQRHFVVHKMIVPGDRERVEQSLKEFRNFVDTHSNVVEACTLFAQVLV 256
            + ++P F  A   +   +  +         +Q+LK +   V+      +A       L 
Sbjct: 213 ALEIDPEFLEAWYYKGVDLDSL------GSFKQALKAYEKAVEIDPENDDAWNNMGIDLE 266

Query: 257 DQEDFDGAEEYFNRSIRVDPENASLYVHRAMLMLQARGNVDEAIKLIEKAISIDKSCMFA 316
           + E +D A   F ++I ++ EN+ ++ ++   + Q +   DEA++   KA+ +D   + A
Sbjct: 267 NLERYDEAINAFEKAIEINSENSDVWYNKGFTLSQVQ-RFDEAVEAYRKAVQLDPEYLEA 325

Query: 317 YETLGTIEVQRGRLEEAVKCFNKALPL 343
           Y +LG +  Q  R EEA+  + KAL L
Sbjct: 326 YSSLGFVLAQLKRFEEALDIYEKALKL 352



 Score = 55.8 bits (133), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 46/206 (22%), Positives = 94/206 (45%), Gaps = 7/206 (3%)

Query: 147 LHAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHV 206
           L +   F +A     EA K++   AD +      Y   G+YE+A+    K + L P++  
Sbjct: 95  LESLGRFEEALKLYQEAVKINSEDADLWNNMAFSYSQIGEYEKAVEAYGKALDLKPDYPN 154

Query: 207 ARAQRHFVVHKMIVPGDRERVEQSLKEFRNFVDTHSNVVEACTLFAQVLVDQEDFDGAEE 266
           A   +   + +        R E+++  +   +  +SN  EA       L    ++D A  
Sbjct: 155 AWYGKALNLSQA------GRYEEAVDAYDIVLKENSNYKEAWAGKGIALGQMGNYDEAII 208

Query: 267 YFNRSIRVDPENASLYVHRAMLMLQARGNVDEAIKLIEKAISIDKSCMFAYETLGTIEVQ 326
            +++++ +DPE    + ++ +  L + G+  +A+K  EKA+ ID     A+  +G     
Sbjct: 209 AYDKALEIDPEFLEAWYYKGV-DLDSLGSFKQALKAYEKAVEIDPENDDAWNNMGIDLEN 267

Query: 327 RGRLEEAVKCFNKALPLARDEAELSH 352
             R +EA+  F KA+ +  + +++ +
Sbjct: 268 LERYDEAINAFEKAIEINSENSDVWY 293



 Score = 42.0 bits (97), Expect = 0.86,   Method: Compositional matrix adjust.
 Identities = 69/292 (23%), Positives = 122/292 (41%), Gaps = 36/292 (12%)

Query: 268 FNRSIRVDPENASLYVHRAMLMLQARGNVDEAIKLIEKAISIDKSCMFAYETLGTIEVQR 327
           F ++I  DP N  L  ++A   L++ G  +EA+KL ++A+ I+      +  +     Q 
Sbjct: 74  FEKAIDKDPGNIYLLNNKAA-ALESLGRFEEALKLYQEAVKINSEDADLWNNMAFSYSQI 132

Query: 328 GRLEEAVKCFNKALPLARD--EAELSHIYSLRDAAIAQMKVCERYNIKKKVSPRSQNITK 385
           G  E+AV+ + KAL L  D   A      +L  A   +  V + Y+I  K +   +    
Sbjct: 133 GEYEKAVEAYGKALDLKPDYPNAWYGKALNLSQAGRYEEAV-DAYDIVLKENSNYKEAWA 191

Query: 386 NEKLAIKQLRENNDIIIRPADKG------------GKTVVMDK-ADYTQKMTSILNSNDY 432
            + +A+ Q+   ++ II   DK              K V +D    + Q + +      Y
Sbjct: 192 GKGIALGQMGNYDEAII-AYDKALEIDPEFLEAWYYKGVDLDSLGSFKQALKA------Y 244

Query: 433 E-IIPGDPTKTIEESEKYGNLENESGQKHAASDFTKAFADLDEAEKVDPNVADSYYQRGQ 491
           E  +  DP      +    +LEN      A + F KA        +++   +D +Y +G 
Sbjct: 245 EKAVEIDPENDDAWNNMGIDLENLERYDEAINAFEKAI-------EINSENSDVWYNKGF 297

Query: 492 IYCLFGQYEEALRNLDKTIALNPNFHVARAQRHFVWTSTLAELMAFSDEFMI 543
                 +++EA+    K + L+P +  A +   FV    LA+L  F +   I
Sbjct: 298 TLSQVQRFDEAVEAYRKAVQLDPEYLEAYSSLGFV----LAQLKRFEEALDI 345



 Score = 40.0 bits (92), Expect = 3.4,   Method: Compositional matrix adjust.
 Identities = 51/222 (22%), Positives = 88/222 (39%), Gaps = 35/222 (15%)

Query: 294 GNVDEAIKLIEKAISIDKSCMFAYETLGTIEVQRGRLEEAVKCFNKALPLARDEAELSHI 353
           G  +EAI   EKAI  D   ++            GR EEA+K + +A+ +  ++A+L + 
Sbjct: 65  GKYNEAIIAFEKAIDKDPGNIYLLNNKAAALESLGRFEEALKLYQEAVKINSEDADLWNN 124

Query: 354 YSLRDAAIAQM-KVCERYNIKKKVSPRSQNITKNEKLAIKQLRENNDIIIRPADKGGKTV 412
            +   + I +  K  E Y     + P   N    + L + Q              G    
Sbjct: 125 MAFSYSQIGEYEKAVEAYGKALDLKPDYPNAWYGKALNLSQ-------------AGRYEE 171

Query: 413 VMDKADYTQKMTSILNSNDYEIIPGDPTKTIEESEKYGNLENESGQKHAASDFTKAFADL 472
            +D  D   K     NSN  E   G   K I      G + N          + +A    
Sbjct: 172 AVDAYDIVLKE----NSNYKEAWAG---KGI----ALGQMGN----------YDEAIIAY 210

Query: 473 DEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNP 514
           D+A ++DP   +++Y +G      G +++AL+  +K + ++P
Sbjct: 211 DKALEIDPEFLEAWYYKGVDLDSLGSFKQALKAYEKAVEIDP 252


>gi|388841092|gb|AFK79142.1| hypothetical protein PCC8801_1300 [uncultured bacterium F39-01]
          Length = 645

 Score = 67.0 bits (162), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 90/393 (22%), Positives = 158/393 (40%), Gaps = 46/393 (11%)

Query: 153 FTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQRH 212
           F +A    + A KV P  A  Y   G  Y    +  EA +   K+IAL  +     A  +
Sbjct: 131 FAQAITAYENALKVTPQDAVIYNNLGAAYFGLNKNNEAAQAFSKSIALKAD----DADAY 186

Query: 213 FVVHKMIVPGDRERVEQSLKEFRNFVDTHSNVVEACTLFAQVLVDQEDFDGAEEYFNRSI 272
           F +   I     ++ + +LK F++ V       EA        +   +F  A   + +++
Sbjct: 187 FNLG--IAYSSMDKFDDALKAFKDAVRIKPGWGEAHNAIGDTYLGMSNFQDAARAYQQAV 244

Query: 273 RVDPENASLYVHRAMLMLQARGNVDEAIKLIEKAISIDKSCMFAYETLGTIEVQRGRLEE 332
           R++P N++ Y +     L   G  +++I+ +  A+ +      AY  LG    + GR +E
Sbjct: 245 RLEPTNSTAYSNLGY-ALDRLGRSNDSIEALRNAVRLKGDDAVAYNNLGASLYKAGRYQE 303

Query: 333 AVKCFNKALPLARDEAE-------LSHIYSLRDAAIAQMKVCERYNIKKKVSPRSQNITK 385
           A++ F  A+ L  ++ E         ++ +  D A+   +   R    K  SP +Q    
Sbjct: 304 AIEAFGNAVRLNPNDVEALNNLGAAYYVTAQYDRALQNFQQAVRV---KADSPDAQYNLG 360

Query: 386 NEKLAIKQLRENNDIIIRPADKGGKTVVMDKADYTQKMTSILNSNDYEIIPGDPTKTIEE 445
           N      + RE        A    +  +  KADY +  T   N     I  G+  + I E
Sbjct: 361 NAYYMTGKYRE--------ATAAYRQAIQLKADYVEART---NLGSLLIALGENQEAITE 409

Query: 446 SEK----------------YGNLE-NESGQKHAASD-FTKAFADLDEAEKVDPNVADSYY 487
             +                Y N++  ES    AA++ F +A     EA ++ P+   +  
Sbjct: 410 LNESIRLRRDNPVAHNNLGYANVKLGESLAPAAATEYFRRAVDSYQEALRLRPDYIKALN 469

Query: 488 QRGQIYCLFGQYEEALRNLDKTIALNPNFHVAR 520
             G +Y   GQY+EA+  L + +  N +F  A+
Sbjct: 470 NLGAVYNKLGQYQEAVDVLRRAVQGNADFAEAQ 502



 Score = 48.1 bits (113), Expect = 0.012,   Method: Compositional matrix adjust.
 Identities = 52/222 (23%), Positives = 94/222 (42%), Gaps = 20/222 (9%)

Query: 156 AFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQRHFVV 215
            +A++   E + P  A  Y++R         Y+EALR       L P++  A      V 
Sbjct: 428 GYANVKLGESLAPAAATEYFRRA-----VDSYQEALR-------LRPDYIKALNNLGAVY 475

Query: 216 HKMIVPGDRERVEQSLKEFRNFVDTHSNVVEACTLFAQVLVDQEDFDGAEEYFNRSIRVD 275
           +K+       + ++++   R  V  +++  EA       L ++  F+ A     +++R+ 
Sbjct: 476 NKL------GQYQEAVDVLRRAVQGNADFAEAQYNLGTALYNRGQFNEAVTSLQQAVRLK 529

Query: 276 PENASLYVHRAMLMLQARGNVDEAIKLIEKAISIDKSCMFAYETLGTIEVQRGRLEEAVK 335
           P+ A  Y      + +A+   D AI+  +KA+S+          LGT+  +  R  EA  
Sbjct: 530 PDYAEAYNSLGSALYKAQ-QFDPAIEAYKKALSLKPGTAETNNNLGTVYFRTKRYPEAAG 588

Query: 336 CFNKALPLARDEAELSHIYSLRDAAIAQMK-VCERYNIKKKV 376
            F +A+ L  D  E     +L   A+   K   ++YN  K V
Sbjct: 589 SFKEAVRLKPDYGEAHFNLALTYVALNDRKGALDQYNKLKAV 630



 Score = 44.7 bits (104), Expect = 0.15,   Method: Compositional matrix adjust.
 Identities = 83/405 (20%), Positives = 153/405 (37%), Gaps = 42/405 (10%)

Query: 151 SDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQ 210
           S+F  A     +A +++P  + +Y   G      G+  +++  L   + L  +  VA   
Sbjct: 231 SNFQDAARAYQQAVRLEPTNSTAYSNLGYALDRLGRSNDSIEALRNAVRLKGDDAVAYNN 290

Query: 211 RHFVVHKMIVPGDRERVEQSLKEFRNFVDTHSNVVEACTLFAQVLVDQEDFDGAEEYFNR 270
               ++K        R +++++ F N V  + N VEA             +D A + F +
Sbjct: 291 LGASLYKA------GRYQEAIEAFGNAVRLNPNDVEALNNLGAAYYVTAQYDRALQNFQQ 344

Query: 271 SIRV--DPENASLYVHRAMLMLQARGNVDEAIKLIEKAISIDKSCMFAYETLGTIEVQRG 328
           ++RV  D  +A   +  A  M    G   EA     +AI +    + A   LG++ +  G
Sbjct: 345 AVRVKADSPDAQYNLGNAYYMT---GKYREATAAYRQAIQLKADYVEARTNLGSLLIALG 401

Query: 329 RLEEAVKCFNKALPLARDE---------AELSHIYSLRDAAIAQM--KVCERYNIKKKVS 377
             +EA+   N+++ L RD          A +    SL  AA  +   +  + Y    ++ 
Sbjct: 402 ENQEAITELNESIRLRRDNPVAHNNLGYANVKLGESLAPAAATEYFRRAVDSYQEALRLR 461

Query: 378 P---RSQNITKNEKLAIKQLRENNDIIIRPADKGGKTVVMDKADYTQKM----TSILNSN 430
           P   ++ N        + Q +E  D++ R         V   AD+ +      T++ N  
Sbjct: 462 PDYIKALNNLGAVYNKLGQYQEAVDVLRR--------AVQGNADFAEAQYNLGTALYNRG 513

Query: 431 DYEIIPGDPTKTIEESEKYGNLENESGQK-HAASDFTKAFADLDEAEKVDPNVADSYYQR 489
            +        + +     Y    N  G   + A  F  A     +A  + P  A++    
Sbjct: 514 QFNEAVTSLQQAVRLKPDYAEAYNSLGSALYKAQQFDPAIEAYKKALSLKPGTAETNNNL 573

Query: 490 GQIYCLFGQYEEALRNLDKTIALNPNFHVARAQRHFVWTSTLAEL 534
           G +Y    +Y EA  +  + + L P++  A    HF    T   L
Sbjct: 574 GTVYFRTKRYPEAAGSFKEAVRLKPDYGEA----HFNLALTYVAL 614



 Score = 43.5 bits (101), Expect = 0.28,   Method: Compositional matrix adjust.
 Identities = 65/323 (20%), Positives = 138/323 (42%), Gaps = 25/323 (7%)

Query: 36  NDPILQPDGLSNGVELTNGDTNESHELDL-LSKAKRAFEH-EDYLTAIRHCTEEIESTSS 93
           ND I   + L N V L   D    + L   L KA R  E  E +  A+R    ++E+ ++
Sbjct: 268 NDSI---EALRNAVRLKGDDAVAYNNLGASLYKAGRYQEAIEAFGNAVRLNPNDVEALNN 324

Query: 94  NHTKALARLLRATVYIFTSQSTKAIEDLTQLVEDTSVDPKIKVNAHIKRAVVHLHAASDF 153
                    L A  Y+ T+Q  +A+++  Q V   +  P  + N  +  A    +    +
Sbjct: 325 ---------LGAAYYV-TAQYDRALQNFQQAVRVKADSPDAQYN--LGNA---YYMTGKY 369

Query: 154 TKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIAL---NPNFHVARAQ 210
            +A A   +A ++  +  ++    G +    G+ +EA+  L+++I L   NP  H     
Sbjct: 370 REATAAYRQAIQLKADYVEARTNLGSLLIALGENQEAITELNESIRLRRDNPVAHNNLGY 429

Query: 211 RHFVVHKMIVPGD-RERVEQSLKEFRNFVDTHSNVVEACTLFAQVLVDQEDFDGAEEYFN 269
            +  + + + P    E   +++  ++  +    + ++A      V      +  A +   
Sbjct: 430 ANVKLGESLAPAAATEYFRRAVDSYQEALRLRPDYIKALNNLGAVYNKLGQYQEAVDVLR 489

Query: 270 RSIRVDPENASLYVHRAMLMLQARGNVDEAIKLIEKAISIDKSCMFAYETLGTIEVQRGR 329
           R+++ + + A    +    +   RG  +EA+  +++A+ +      AY +LG+   +  +
Sbjct: 490 RAVQGNADFAEAQYNLGTALYN-RGQFNEAVTSLQQAVRLKPDYAEAYNSLGSALYKAQQ 548

Query: 330 LEEAVKCFNKALPLARDEAELSH 352
            + A++ + KAL L    AE ++
Sbjct: 549 FDPAIEAYKKALSLKPGTAETNN 571


>gi|113478145|ref|YP_724206.1| TPR repeat-containing serine/threonine protein kinase
           [Trichodesmium erythraeum IMS101]
 gi|110169193|gb|ABG53733.1| serine/threonine protein kinase with TPR repeats [Trichodesmium
           erythraeum IMS101]
          Length = 738

 Score = 67.0 bits (162), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 57/252 (22%), Positives = 108/252 (42%), Gaps = 31/252 (12%)

Query: 126 EDTSVDPKIKVNAHIKRAVVHLHAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFG 185
           E   ++PK K + + KR   + ++   + KA  D     K+  N  D+YYQR  +Y    
Sbjct: 373 EALKLNPK-KASIYYKRGNSY-YSHRSYEKAIKDYTAGIKIKANYEDAYYQRALVYYELD 430

Query: 186 QYEEALRNLDKTIALNPNFHVARAQRHFV----------------------------VHK 217
             ++A+ +L +T+ +NPN+  A  +R  +                            +++
Sbjct: 431 NKDKAMTDLTQTLRINPNYTQAYKKRGLIYYEIGDYKSAIQDYSESIRLNPKDSKTYINR 490

Query: 218 MIVPGDRERVEQSLKEFRNFVDTHSNVVEACTLFAQVLVDQEDFDGAEEYFNRSIRVDPE 277
            I  G  E    ++ ++   +  + N V+A     + L    D+ GA E +N+ + V P+
Sbjct: 491 GIARGALEDQVGAISDYTQAIKLNPNDVKAYYYRGKSLFKMLDYQGAIENYNQFLEVKPD 550

Query: 278 NASLYVHRAMLMLQARGNVDEAIKLIEKAISIDKSCMFAYETLGTIEVQRGRLEEAVKCF 337
           +A  Y +R    L  +GN   AI   ++AI I+     AY  L       G  + A +  
Sbjct: 551 DADAYTNRCSAYLH-KGNDSSAIADCQQAIEINPQDFLAYHNLCIAYFNLGEYQRATENC 609

Query: 338 NKALPLARDEAE 349
           + A+ + ++ A+
Sbjct: 610 SIAIGIDKNNAK 621



 Score = 60.5 bits (145), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 45/197 (22%), Positives = 99/197 (50%), Gaps = 13/197 (6%)

Query: 156 AFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQRHFVV 215
           A A+  EA K++P  A  YY+RG  Y     YE+A+++    I +  N+  A  QR  V 
Sbjct: 367 AIANYTEALKLNPKKASIYYKRGNSYYSHRSYEKAIKDYTAGIKIKANYEDAYYQRALVY 426

Query: 216 HKMIVPGDRERVEQSLKEFRNFVDTHSNVVEACTLFAQVLVDQEDFDGAEEYFNRSIRVD 275
           +++      +  ++++ +    +  + N  +A      +  +  D+  A + ++ SIR++
Sbjct: 427 YEL------DNKDKAMTDLTQTLRINPNYTQAYKKRGLIYYEIGDYKSAIQDYSESIRLN 480

Query: 276 PENASLYVHRAMLMLQARGNVDEAIKLIE---KAISIDKSCMFAYETLGTIEVQRGRLEE 332
           P+++  Y++R +    ARG +++ +  I    +AI ++ + + AY   G    +    + 
Sbjct: 481 PKDSKTYINRGI----ARGALEDQVGAISDYTQAIKLNPNDVKAYYYRGKSLFKMLDYQG 536

Query: 333 AVKCFNKALPLARDEAE 349
           A++ +N+ L +  D+A+
Sbjct: 537 AIENYNQFLEVKPDDAD 553



 Score = 60.1 bits (144), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 66/258 (25%), Positives = 113/258 (43%), Gaps = 18/258 (6%)

Query: 94  NHTKALARLLRATVYIFTSQSTKAIEDLTQLVEDTSVDPKIKVNAHIKRAVVHLHAASDF 153
           N+T+A  +  R  +Y        AI+D ++ +     D K  +N  I R      A  D 
Sbjct: 448 NYTQAYKK--RGLIYYEIGDYKSAIQDYSESIRLNPKDSKTYINRGIARG-----ALEDQ 500

Query: 154 TKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQR-H 212
             A +D  +A K++PN   +YY RG+       Y+ A+ N ++ + + P+   A   R  
Sbjct: 501 VGAISDYTQAIKLNPNDVKAYYYRGKSLFKMLDYQGAIENYNQFLEVKPDDADAYTNRCS 560

Query: 213 FVVHKMIVPGDRERVEQSLK-EFRNFVDTHSNVVEACTLFAQVLVDQEDFDGAEEYFNRS 271
             +HK          +Q+++   ++F+  H+  +    L         ++  A E  + +
Sbjct: 561 AYLHKGNDSSAIADCQQAIEINPQDFLAYHNLCIAYFNL--------GEYQRATENCSIA 612

Query: 272 IRVDPENASLYVHRAMLMLQARGNVDEAIKLIEKAISIDKSCMFAYETLGTIEVQRGRLE 331
           I +D  NA  Y +RA L   ARG + EAIK    AI I+      Y   G I        
Sbjct: 613 IGIDKNNAKAYTNRA-LAQSARGYLQEAIKDFTTAIEINPQDDLNYSHRGMIFSVLKNYN 671

Query: 332 EAVKCFNKALPLARDEAE 349
           +A+K F++A+ L  + A+
Sbjct: 672 QAIKDFSQAIRLNSNNAK 689



 Score = 42.7 bits (99), Expect = 0.44,   Method: Compositional matrix adjust.
 Identities = 19/63 (30%), Positives = 34/63 (53%)

Query: 465 FTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQRH 524
           + KA  D     K+  N  D+YYQR  +Y      ++A+ +L +T+ +NPN+  A  +R 
Sbjct: 398 YEKAIKDYTAGIKIKANYEDAYYQRALVYYELDNKDKAMTDLTQTLRINPNYTQAYKKRG 457

Query: 525 FVW 527
            ++
Sbjct: 458 LIY 460



 Score = 42.4 bits (98), Expect = 0.57,   Method: Compositional matrix adjust.
 Identities = 18/48 (37%), Positives = 30/48 (62%)

Query: 467 KAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNP 514
           KA  DL +  +++PN   +Y +RG IY   G Y+ A+++  ++I LNP
Sbjct: 434 KAMTDLTQTLRINPNYTQAYKKRGLIYYEIGDYKSAIQDYSESIRLNP 481



 Score = 39.7 bits (91), Expect = 4.0,   Method: Compositional matrix adjust.
 Identities = 21/60 (35%), Positives = 32/60 (53%)

Query: 468 AFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQRHFVW 527
           A A+  EA K++P  A  YY+RG  Y     YE+A+++    I +  N+  A  QR  V+
Sbjct: 367 AIANYTEALKLNPKKASIYYKRGNSYYSHRSYEKAIKDYTAGIKIKANYEDAYYQRALVY 426



 Score = 39.3 bits (90), Expect = 5.8,   Method: Compositional matrix adjust.
 Identities = 41/182 (22%), Positives = 70/182 (38%), Gaps = 34/182 (18%)

Query: 67  KAKRAFEHEDYLTAIRHCTEEIESTSSNHTKALARLLRATVYIFTSQSTKAIEDLTQLVE 126
           + K  F+  DY  AI +  + +E    +   A A   R + Y+     + AI D  Q +E
Sbjct: 524 RGKSLFKMLDYQGAIENYNQFLEVKPDD---ADAYTNRCSAYLHKGNDSSAIADCQQAIE 580

Query: 127 ---------------------------DTSVDPKIKVN---AHIKRAVVHLHAASDFTKA 156
                                      + S+   I  N   A+  RA+    A     +A
Sbjct: 581 INPQDFLAYHNLCIAYFNLGEYQRATENCSIAIGIDKNNAKAYTNRALAQ-SARGYLQEA 639

Query: 157 FADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQRHFVVH 216
             D   A +++P    +Y  RG I+ +   Y +A+++  + I LN N   A   R  ++H
Sbjct: 640 IKDFTTAIEINPQDDLNYSHRGMIFSVLKNYNQAIKDFSQAIRLNSNNAKAYYNRGVILH 699

Query: 217 KM 218
           K+
Sbjct: 700 KL 701


>gi|325959562|ref|YP_004291028.1| hypothetical protein Metbo_1834 [Methanobacterium sp. AL-21]
 gi|325330994|gb|ADZ10056.1| Tetratricopeptide TPR_1 repeat-containing protein [Methanobacterium
           sp. AL-21]
          Length = 693

 Score = 67.0 bits (162), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 63/253 (24%), Positives = 114/253 (45%), Gaps = 39/253 (15%)

Query: 127 DTSVDPKIKVNAHIKRAVVHLHAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQ 186
           D ++D + K  A      + L+   +  +     + A ++DP  ++++  +G  Y   G+
Sbjct: 292 DRALDLEPKSAAIWNSKALSLYEIHEHEEEIGCYNHALEIDPEFSEAWTNKGATYLTLGR 351

Query: 187 YEEALRNLDKTIALNPNFHVARAQRHFVVHKM------IVPGDR---------------E 225
            EEAL  L+K + LNPN   A   +  V+  +      I+  DR                
Sbjct: 352 NEEALVCLEKALELNPNDQTALMNKASVLISVEDYDDAILYCDRVLEIDSNQVAALFLKA 411

Query: 226 RVEQSLKEFRNFVDTHSNVV-------EACTLFAQVLVDQEDFDGAEE---YFNRSIRVD 275
           R +Q++ +F   ++T   +        EA  L     V QE  +  E+    FN++I ++
Sbjct: 412 RTQQNIAKFDESIETLERITSIDPDNDEAWFLIG---VSQEYLNKPEDALVSFNKAIEIE 468

Query: 276 PEN--ASLYVHRAMLMLQARGNVDEAIKLIEKAISIDKSCMFAYETLGTIEVQRGRLEEA 333
           P+N  A  +  R+++ML   G  DEA+K  E    +D     A+   G I +++G  +EA
Sbjct: 469 PKNIGAWYFKGRSLMML---GRADEALKSYEMVTLMDPENYEAFHLTGLINMEQGNYDEA 525

Query: 334 VKCFNKALPLARD 346
           +K F+  L ++ D
Sbjct: 526 LKNFDAVLNISPD 538



 Score = 62.8 bits (151), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 72/314 (22%), Positives = 139/314 (44%), Gaps = 39/314 (12%)

Query: 57  NESHELDLLSKAKRAFEHEDYLTAIRHCTEEIESTSSNHTKALARLLRATVYIFTSQSTK 116
           N + +  L++KA      EDY  AI +C   +E   SN   AL   L+A      ++  +
Sbjct: 366 NPNDQTALMNKASVLISVEDYDDAILYCDRVLE-IDSNQVAAL--FLKARTQQNIAKFDE 422

Query: 117 AIEDLTQLVEDTSVDP-KIKVNAHIKRAVVHLHAASDFTKAFADLDEAEKVDPNVADSYY 175
           +IE L ++   TS+DP   +    I  +  +L+   D   A    ++A +++P    ++Y
Sbjct: 423 SIETLERI---TSIDPDNDEAWFLIGVSQEYLNKPED---ALVSFNKAIEIEPKNIGAWY 476

Query: 176 QRGQIYCLFGQYEEALRNLDKTIALNPN----FHVA-----------RAQRHF------- 213
            +G+   + G+ +EAL++ +    ++P     FH+             A ++F       
Sbjct: 477 FKGRSLMMLGRADEALKSYEMVTLMDPENYEAFHLTGLINMEQGNYDEALKNFDAVLNIS 536

Query: 214 ------VVHKMIVPGDRERVEQSLKEFRNFVDTHSNVVEACTLFAQVLVDQEDFDGAEEY 267
                 +++K    G  ++ E++L+ F   +D  S+ VEA       L    D D + + 
Sbjct: 537 PDNIDVLINKGQAYGFMDKPEKALEYFDEALDLESDNVEALNYRGVALKHMGDHDASIKT 596

Query: 268 FNRSIRVDPENASLYVHRAMLMLQARGNVDEAIKLIEKAISIDKSCMFAYETLGTIEVQR 327
           F   + ++PEN   + H+  L  +  G  ++AI+  + A+  D   + A    G      
Sbjct: 597 FEAVLEMEPENPWAW-HQIGLNYKEVGEYEKAIESFDNALDEDPKFLLALLEKGVCLGMN 655

Query: 328 GRLEEAVKCFNKAL 341
            + +EA++CF+  L
Sbjct: 656 KQFKEALECFDDVL 669



 Score = 51.2 bits (121), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 82/408 (20%), Positives = 156/408 (38%), Gaps = 48/408 (11%)

Query: 129 SVDPKIKVNAH----IKRAVVHLHAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLF 184
           + D  +K N+       R  + L       +A    D++  + PN   +         L 
Sbjct: 18  ACDELLKTNSEDYETWTRKGMALMGLGKINEAIECFDKSLAIMPNYPWALDNMCMALLLV 77

Query: 185 GQYEEALRNLDKTIALNPNFHVARAQRHFVVHKMIVPGDRERVEQSLKEFRNFVDTHSNV 244
            +Y+E+L   DK + ++P+  V    + F++  M   G+ E       E     D  ++V
Sbjct: 78  ERYDESLECFDKALEIHPDDEVLINNKAFLLSSM---GNFEGALILFDEILKTTDNKNSV 134

Query: 245 VEACTLFAQVLVDQEDFDGAEEYFNRSIRVDPENASLYVHRAMLMLQARGNVDEAIKLIE 304
           ++  T     L++ E +D A    N  +    ++  LY  +    L   G  DEAI+  E
Sbjct: 135 LKEKT---NCLLNLERYDDALNSINEVLEEVSDDPDLYFKKGN-ALGGLGRTDEAIEAFE 190

Query: 305 KAISIDKSCMFAYETLGTIEVQRGRLEEAVKCFNKALPLARDEAELSHIYSLRDAAIAQM 364
            +++++   + ++   G          +A+ CF+ A+ L  D+      + L+   + +M
Sbjct: 191 TSLNLNPLFVESWNAKGVAYSMLECYSDALICFDHAIDLDVDD---DRGWFLKAETLTKM 247

Query: 365 -KVCERYNI-KKKVSPRSQNITKNEKLAIKQLRENNDIIIRPADKGGKTVVMDKADYTQK 422
            ++ E ++  KK V     N     KL +                    V+ +   + Q 
Sbjct: 248 NELKEAFDCYKKAVDLNPLNTEGWYKLGL--------------------VLYNLKQFPQS 287

Query: 423 MTSILNSNDYEIIPGDPTKTIEESEKYGNLENESGQKHAASDFTKAFADLDEAEKVDPNV 482
           + S   + D E     P      + K  +L      +     +  A        ++DP  
Sbjct: 288 IESYDRALDLE-----PKSAAIWNSKALSLYEIHEHEEEIGCYNHAL-------EIDPEF 335

Query: 483 ADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQRHFVWTST 530
           ++++  +G  Y   G+ EEAL  L+K + LNPN   A   +  V  S 
Sbjct: 336 SEAWTNKGATYLTLGRNEEALVCLEKALELNPNDQTALMNKASVLISV 383


>gi|124004030|ref|ZP_01688877.1| TPR repeat [Microscilla marina ATCC 23134]
 gi|123990609|gb|EAY30089.1| TPR repeat [Microscilla marina ATCC 23134]
          Length = 603

 Score = 67.0 bits (162), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 104/454 (22%), Positives = 183/454 (40%), Gaps = 68/454 (14%)

Query: 104 RATVYIFTSQSTKAIEDL-----TQLVEDTSVDPKIKVNAHIKRAVVHLHAASDFTKAFA 158
           RA  Y+       AI+D       ++ +  S + +    A +KR          FT+A  
Sbjct: 132 RAFTYLTMRVFQSAIDDYDKSIGLKMADAASYNNRGWAKAKLKR----------FTEAEQ 181

Query: 159 DLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNF---HVARAQRHFVV 215
           D ++A  +DP  A +Y  RG +    G Y  ++R+  K+I LNP F   ++ R   H+  
Sbjct: 182 DYNKAIAMDPEYAMAYNNRGYVRAKLGDYTNSVRDYSKSIILNPRFSDAYLWRGITHYRF 241

Query: 216 H------KMIVPGDRERVEQSLKEFRNFVDTHSNVVEACTLFA---QVLVDQEDFDGAEE 266
                  K      R + +++ +   +F         A   FA   + L++ E +  A  
Sbjct: 242 GNQEQACKDWTSALRLKNQKAQRWLDDFCTGDGPAKTADEYFADGDKALLN-EKWQEAIS 300

Query: 267 YFNRSIRVDPENASLYVHRAMLMLQARGNVDEAIKLIEKAISIDKSCMFAYETLGTIEVQ 326
            + + + +  ++   Y HR     +A GN+D+AI    KAI I+    +AY + G  +V 
Sbjct: 301 AYTKCVHLKSDHYMAYGHRGRANRKA-GNLDQAIADFSKAIKINPEYDWAYASRGYAKVV 359

Query: 327 RGRLEEAVKCFNKALPLARDEAELSHIYSLRDA-AIAQMK-VCERYNIKKKVSPRSQNIT 384
             +  EA+  F+KA+ L +     ++ +  R    + + K   E YN   K+ P      
Sbjct: 360 AKKYTEALLDFDKAIAL-KPSYRWAYAHRARTKYYLGRYKNAIEDYNNALKIDPNDGWSY 418

Query: 385 KNEKLA-------------IKQLRENNDI----IIRPADKGGKTVVMDKADYTQKMTSIL 427
           +N  LA             +K+ +E  D     +I+   K   +      D T+   + L
Sbjct: 419 RNRALARYELGDAVGTCADLKKAKELGDYKAEGLIQEYCKTRGSNNQRTTDTTRNYNTGL 478

Query: 428 NSNDYEIIPGDPTKTIEESEKYGN--LENESGQKHAASDFTKAFADLDEAEKVDPNVADS 485
           +S++ E I         +  K GN  L+NE+        F  A     +A   D    ++
Sbjct: 479 SSSNAEAI---------QFYKLGNERLDNEA--------FYDAITRYTQAIWADARFKEA 521

Query: 486 YYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVA 519
           Y  RG        Y  A+++ D  + L+ N+  A
Sbjct: 522 YMDRGHAKIRLKDYRSAIKDFDNALLLDINYSEA 555



 Score = 58.9 bits (141), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 99/422 (23%), Positives = 163/422 (38%), Gaps = 70/422 (16%)

Query: 110 FTSQSTKAI-EDLTQLVED--TSVDPKIKVNAHIKRAVVHLHAASDFTKAFADLDEAEKV 166
           F S + K + ED    V D   ++  K  V A      +  +    + ++  D D A ++
Sbjct: 28  FDSGNQKLMKEDYDGAVNDYNNAIAQKTNVAAFFANRAIAKYRLGRYLESVQDCDIALRL 87

Query: 167 DPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQRHFVVHKMIVPGDRER 226
           +PN +  Y  RG       +Y+EA+ +  K  AL P F  A   R F    M V      
Sbjct: 88  EPNQSKVYNNRGLANFGLKRYKEAVSDYTKATALEPTFAKAYNNRAFTYLTMRV------ 141

Query: 227 VEQSLKEFRNFVDTHSNVVEACTLFAQVLVDQEDFDGAEEYFNRSIRVDPENASLYVHRA 286
                  F++ +D                    D+D       +SI +   +A+ Y +R 
Sbjct: 142 -------FQSAID--------------------DYD-------KSIGLKMADAASYNNRG 167

Query: 287 MLMLQARGNVDEAIKLIEKAISIDKSCMFAYETLGTIEVQRGRLEEAVKCFNKALPLARD 346
               + +    EA +   KAI++D     AY   G +  + G    +V+ ++K++ L   
Sbjct: 168 WAKAKLK-RFTEAEQDYNKAIAMDPEYAMAYNNRGYVRAKLGDYTNSVRDYSKSIIL--- 223

Query: 347 EAELSHIYSLRDAA----IAQMKVCERYNIKKKVSPRSQNITKNEKLAIKQLRENNDIII 402
               S  Y  R         Q + C+ +    ++        KN+K      R  +D   
Sbjct: 224 NPRFSDAYLWRGITHYRFGNQEQACKDWTSALRL--------KNQKAQ----RWLDDFCT 271

Query: 403 RPADKGGKTVVMDKADYTQKMTSILNSNDYEIIPGDPTKTIE-ESEKYGNLENESGQKHA 461
              D   KT     AD  +   ++LN    E I    TK +  +S+ Y    +       
Sbjct: 272 --GDGPAKTADEYFADGDK---ALLNEKWQEAISA-YTKCVHLKSDHYMAYGHRGRANRK 325

Query: 462 ASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARA 521
           A +  +A AD  +A K++P    +Y  RG    +  +Y EAL + DK IAL P++  A A
Sbjct: 326 AGNLDQAIADFSKAIKINPEYDWAYASRGYAKVVAKKYTEALLDFDKAIALKPSYRWAYA 385

Query: 522 QR 523
            R
Sbjct: 386 HR 387



 Score = 42.4 bits (98), Expect = 0.61,   Method: Compositional matrix adjust.
 Identities = 28/91 (30%), Positives = 41/91 (45%), Gaps = 13/91 (14%)

Query: 454 NESGQKHAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALN 513
           N    K     FT+A  D ++A  +DP  A +Y  RG +    G Y  ++R+  K+I LN
Sbjct: 165 NRGWAKAKLKRFTEAEQDYNKAIAMDPEYAMAYNNRGYVRAKLGDYTNSVRDYSKSIILN 224

Query: 514 PNF---HVARAQRHFV----------WTSTL 531
           P F   ++ R   H+           WTS L
Sbjct: 225 PRFSDAYLWRGITHYRFGNQEQACKDWTSAL 255


>gi|440681896|ref|YP_007156691.1| Tetratricopeptide TPR_1 repeat-containing protein [Anabaena
           cylindrica PCC 7122]
 gi|428679015|gb|AFZ57781.1| Tetratricopeptide TPR_1 repeat-containing protein [Anabaena
           cylindrica PCC 7122]
          Length = 371

 Score = 67.0 bits (162), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 55/237 (23%), Positives = 101/237 (42%), Gaps = 12/237 (5%)

Query: 104 RATVYIFTSQSTKAIEDLTQLVEDTSVDPKIKVNAHIKRAVVHLHAASDFTKAFADLDEA 163
           R  ++    Q T+AI D  Q ++   ++P +    H +    +  A  D+  A AD ++A
Sbjct: 118 RGNIFYILGQYTEAIADYNQAIQ---LNPNLSAAYHNRGNSRY--ALKDYQGAIADYNQA 172

Query: 164 EKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQRHFVVHKMIVPGD 223
             ++P   ++YY RG I      Y+ A+ + ++ I LNP    A  QR  V   +     
Sbjct: 173 LAINPQFGEAYYNRGLIMSHLQDYQSAIADFNQAIQLNPGDDQAYHQRGLVYSNL----- 227

Query: 224 RERVEQSLKEFRNFVDTHSNVVEACTLFAQVLVDQEDFDGAEEYFNRSIRVDPENASLYV 283
            E  E +++++   +  +  +     L A  L    D+  A     R ++++P     Y 
Sbjct: 228 -EDYENAIQDYNQALQVNPTLPIVYGLRANALHHLGDYQSAIADSTRLLQLNPTLVEGYC 286

Query: 284 HRAMLMLQARGNVDEAIKLIEKAISIDKSCMFAYETLGTIEVQRGRLEEAVKCFNKA 340
            RA    +  GN   AI+   +A+ +  +   AY     I +  G  + A+  F K+
Sbjct: 287 DRANFH-RLLGNYQGAIEDYNRALQLQPNYATAYFLRANIHLHLGNNQAAIDDFQKS 342



 Score = 56.2 bits (134), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 89/377 (23%), Positives = 141/377 (37%), Gaps = 74/377 (19%)

Query: 183 LFGQYEEALRNLDKTIALNPNFHVARAQRHFVVHKMIVPGDRERVEQSLKEFRNFVDTHS 242
           L G Y  A+   ++ I LNP             H  IV   R      L+EF   +  + 
Sbjct: 15  LSGDYRGAITFFNQAIQLNP-------------HLEIVYHYRGHAYLGLEEFDLAIADYQ 61

Query: 243 NVVEACTLFAQVLVDQEDFDGAEEYFNRSIRVDPENASLYVHRAMLMLQARGNVDEAIKL 302
                 T    +     +FD A+ Y NR                 L    RG+   AI  
Sbjct: 62  QARHNSTGLENL-----NFDIAKAYHNRG----------------LARFQRGDNQAAIVD 100

Query: 303 IEKAISIDKSCMFAYETLGTIEVQRGRLEEAVKCFNKALPLARDEAELSHI-----YSLR 357
           I++A+      + AY   G I    G+  EA+  +N+A+ L  + +   H      Y+L+
Sbjct: 101 IKQALDYYPDFVAAYSNRGNIFYILGQYTEAIADYNQAIQLNPNLSAAYHNRGNSRYALK 160

Query: 358 D--AAIAQMKVCERYNIKKKVSPRSQNITKNEKLAIKQLRE--------NNDIIIRPADK 407
           D   AIA       YN    ++P+      N  L +  L++        N  I + P D 
Sbjct: 161 DYQGAIAD------YNQALAINPQFGEAYYNRGLIMSHLQDYQSAIADFNQAIQLNPGD- 213

Query: 408 GGKTVVMDKADYTQKMTSILNSNDYEIIPGDPTKTIEESEK----YGNLENESGQKHAAS 463
                  D+A Y Q+     N  DYE    D  + ++ +      YG   N     H   
Sbjct: 214 -------DQA-YHQRGLVYSNLEDYENAIQDYNQALQVNPTLPIVYGLRANA---LHHLG 262

Query: 464 DFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVA---R 520
           D+  A AD     +++P + + Y  R   + L G Y+ A+ + ++ + L PN+  A   R
Sbjct: 263 DYQSAIADSTRLLQLNPTLVEGYCDRANFHRLLGNYQGAIEDYNRALQLQPNYATAYFLR 322

Query: 521 AQRHFVWTSTLAELMAF 537
           A  H    +  A +  F
Sbjct: 323 ANIHLHLGNNQAAIDDF 339



 Score = 53.9 bits (128), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 48/214 (22%), Positives = 85/214 (39%), Gaps = 44/214 (20%)

Query: 151 SDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQ 210
            D   A  D+ +A    P+   +Y  RG I+ + GQY EA+ + ++ I LNPN   A   
Sbjct: 92  GDNQAAIVDIKQALDYYPDFVAAYSNRGNIFYILGQYTEAIADYNQAIQLNPNLSAAYH- 150

Query: 211 RHFVVHKMIVPGDRERVEQSLKEFRNFVDTHSNVVEACTLFAQVLVDQEDFDGAEEYFNR 270
                       +R     +LK                           D+ GA   +N+
Sbjct: 151 ------------NRGNSRYALK---------------------------DYQGAIADYNQ 171

Query: 271 SIRVDPENASLYVHRAMLMLQARGNVDEAIKLIEKAISIDKSCMFAYETLGTIEVQRGRL 330
           ++ ++P+    Y +R ++M   + +   AI    +AI ++     AY   G +       
Sbjct: 172 ALAINPQFGEAYYNRGLIMSHLQ-DYQSAIADFNQAIQLNPGDDQAYHQRGLVYSNLEDY 230

Query: 331 EEAVKCFNKALPLARDEAELSHIYSLRDAAIAQM 364
           E A++ +N+AL +      L  +Y LR  A+  +
Sbjct: 231 ENAIQDYNQALQV---NPTLPIVYGLRANALHHL 261


>gi|332707691|ref|ZP_08427719.1| hypothetical protein LYNGBM3L_54490 [Moorea producens 3L]
 gi|332353600|gb|EGJ33112.1| hypothetical protein LYNGBM3L_54490 [Moorea producens 3L]
          Length = 463

 Score = 67.0 bits (162), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 61/246 (24%), Positives = 109/246 (44%), Gaps = 12/246 (4%)

Query: 98  ALARLLRATVYIFTSQSTKAIEDLTQLVEDTSVDPKIKVNAHIKRAVVHLHAASDFTKAF 157
           A+ R L A  Y+   ++  A+E     +   ++DP +    +      +   A D   A 
Sbjct: 81  AMGRYLLANTYLQQGKNQLALEQYQIAI---ALDPTLSQAYYNLGIAFYKEGAPD--SAI 135

Query: 158 ADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQRHFVVHK 217
           A   +A   +P  AD YY  G      G  EEA+ +   TI L+P++  A    ++ +  
Sbjct: 136 AAYRQALSFNPESADIYYNLGLALESQGNQEEAIEHYQATIRLDPDYGKA----YYNMGL 191

Query: 218 MIVPGDRERVEQSLKEFRNFVDTHSNVVEACTLFAQVLVDQEDFDGAEEYFNRSIRVDPE 277
           ++V  +++++  +    R  V T   +V+A      +LV+Q +   AEE F  +++VDP+
Sbjct: 192 ILV--EQDQIGPATTALRQAVRTQPKLVKAHYQLGLLLVEQGEKSAAEESFREAVKVDPK 249

Query: 278 NASLYVHRAMLMLQARGNVDEAIKLIEKAISIDKSCMFAYETLGTIEVQRGRLEEAVKCF 337
            A      A+++ + +G + EAI        ++   + AY  LG      G   EAV   
Sbjct: 250 LAPAQYQLAVILFE-KGELAEAITRFRLVTELEPENVDAYRQLGAALTANGEYAEAVTTL 308

Query: 338 NKALPL 343
             A+ L
Sbjct: 309 KLAVQL 314



 Score = 45.8 bits (107), Expect = 0.065,   Method: Compositional matrix adjust.
 Identities = 41/197 (20%), Positives = 82/197 (41%), Gaps = 7/197 (3%)

Query: 145 VHLHAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNF 204
           V L+   DF  A     +A + DP +A   Y     Y   G+ + AL      IAL+P  
Sbjct: 55  VKLYGRRDFPGAERAFRKALEFDPYMAMGRYLLANTYLQQGKNQLALEQYQIAIALDPTL 114

Query: 205 HVARAQRHFVVHKMIVPGDRERVEQSLKEFRNFVDTHSNVVEACTLFAQVLVDQEDFDGA 264
             A        +K   P      + ++  +R  +  +    +        L  Q + + A
Sbjct: 115 SQAYYNLGIAFYKEGAP------DSAIAAYRQALSFNPESADIYYNLGLALESQGNQEEA 168

Query: 265 EEYFNRSIRVDPENASLYVHRAMLMLQARGNVDEAIKLIEKAISIDKSCMFAYETLGTIE 324
            E++  +IR+DP+    Y +  +++++ +  +  A   + +A+      + A+  LG + 
Sbjct: 169 IEHYQATIRLDPDYGKAYYNMGLILVE-QDQIGPATTALRQAVRTQPKLVKAHYQLGLLL 227

Query: 325 VQRGRLEEAVKCFNKAL 341
           V++G    A + F +A+
Sbjct: 228 VEQGEKSAAEESFREAV 244



 Score = 42.4 bits (98), Expect = 0.58,   Method: Compositional matrix adjust.
 Identities = 70/323 (21%), Positives = 135/323 (41%), Gaps = 44/323 (13%)

Query: 241 HSNVVEACTLFAQV---LVDQEDFDGAEEYFNRSIRVDPENASLYVHRAMLMLQARGNVD 297
           +SN ++A + F QV   L  + DF GAE  F +++  DP  A      A   LQ +G   
Sbjct: 41  YSNNLDAASYF-QVGVKLYGRRDFPGAERAFRKALEFDPYMAMGRYLLANTYLQ-QGKNQ 98

Query: 298 EAIKLIEKAISIDKSCMFAYETLGTIEVQRGRLEEAVKCFNKALPLARDEAELSHIYSL- 356
            A++  + AI++D +   AY  LG    + G  + A+  + +AL    + A++ +   L 
Sbjct: 99  LALEQYQIAIALDPTLSQAYYNLGIAFYKEGAPDSAIAAYRQALSFNPESADIYYNLGLA 158

Query: 357 ------RDAAIAQMKVCER---------YNI------KKKVSPRSQNITKNEKLAIKQLR 395
                 ++ AI   +   R         YN+      + ++ P +  + +  +   K ++
Sbjct: 159 LESQGNQEEAIEHYQATIRLDPDYGKAYYNMGLILVEQDQIGPATTALRQAVRTQPKLVK 218

Query: 396 ENNDIIIRPADKGGKTVVMDKADYTQKMTSILNSNDYEII-----PGDPTKTIEESEKYG 450
            +  + +   ++G K+   +      K+   L    Y++       G+  + I       
Sbjct: 219 AHYQLGLLLVEQGEKSAAEESFREAVKVDPKLAPAQYQLAVILFEKGELAEAITRFRLVT 278

Query: 451 NLENESGQKH--------AASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEA 502
            LE E+   +        A  ++ +A   L  A ++DP  A ++Y  G       QYEEA
Sbjct: 279 ELEPENVDAYRQLGAALTANGEYAEAVTTLKLAVQLDPYHALTHYNLGVALQQQEQYEEA 338

Query: 503 LRNLDKTIALNPNFHVARAQRHF 525
           +    + ++L+P    A A+ H+
Sbjct: 339 MAEYQQALSLSP----ALAEGHY 357


>gi|282895338|ref|ZP_06303539.1| TPR repeat protein [Raphidiopsis brookii D9]
 gi|281199589|gb|EFA74450.1| TPR repeat protein [Raphidiopsis brookii D9]
          Length = 260

 Score = 67.0 bits (162), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 62/232 (26%), Positives = 98/232 (42%), Gaps = 22/232 (9%)

Query: 117 AIEDLTQLVEDTSVDPKIKVNAHIKRAVVHLHAASDFTKAFADLDEAEKVDPNVADSYYQ 176
           AI D +Q +   +  P+  + A+  R +   H   D  +A +D  +  K++PN   +YY 
Sbjct: 41  AINDFSQFI---NFYPRNSL-AYFNRGIA-WHELGDKQRAISDFTQVIKLNPNNVAAYYN 95

Query: 177 RGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQRHFVVHKMIVPGDRERV----EQSLK 232
           RG      G    A+ +    I LNPNF      R    H +   GD++       QSL+
Sbjct: 96  RGASRSDLGDKHGAINDFTTVINLNPNFAQPYYNRGLARHNL---GDKQGAISDFTQSLR 152

Query: 233 -EFRNFVDTHSNVVEACTLFAQVLVDQEDFDGAEEYFNRSIRVDPENASLYVHRAMLMLQ 291
            ++R+    ++  +           D  D  GA   F ++I++ P  A  Y +R  L   
Sbjct: 153 LDYRDPTAYNNRGI--------ARYDMGDRQGAINDFTQAIQISPNFAQAYNNRG-LARH 203

Query: 292 ARGNVDEAIKLIEKAISIDKSCMFAYETLGTIEVQRGRLEEAVKCFNKALPL 343
             G+   AI    +AI I+ +   AY   G      G  E A++ FNKA  L
Sbjct: 204 NMGDKQGAISDFTQAIQINPNFAQAYNNRGATRNDLGDKEGAIRDFNKASQL 255



 Score = 53.5 bits (127), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 48/199 (24%), Positives = 82/199 (41%), Gaps = 7/199 (3%)

Query: 151 SDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQ 210
            D   A +D  +A  ++PN A  YY RG      G  + A+ +  + I   P   +A   
Sbjct: 2   GDKQGAISDFTQAINLNPNFAQPYYNRGATRNDLGDKQGAINDFSQFINFYPRNSLAYFN 61

Query: 211 RHFVVHKMIVPGDRERVEQSLKEFRNFVDTHSNVVEACTLFAQVLVDQEDFDGAEEYFNR 270
           R    H++   GD++R   ++ +F   +  + N V A         D  D  GA   F  
Sbjct: 62  RGIAWHEL---GDKQR---AISDFTQVIKLNPNNVAAYYNRGASRSDLGDKHGAINDFTT 115

Query: 271 SIRVDPENASLYVHRAMLMLQARGNVDEAIKLIEKAISIDKSCMFAYETLGTIEVQRGRL 330
            I ++P  A  Y +R  L     G+   AI    +++ +D     AY   G      G  
Sbjct: 116 VINLNPNFAQPYYNRG-LARHNLGDKQGAISDFTQSLRLDYRDPTAYNNRGIARYDMGDR 174

Query: 331 EEAVKCFNKALPLARDEAE 349
           + A+  F +A+ ++ + A+
Sbjct: 175 QGAINDFTQAIQISPNFAQ 193



 Score = 40.8 bits (94), Expect = 1.7,   Method: Compositional matrix adjust.
 Identities = 58/286 (20%), Positives = 105/286 (36%), Gaps = 36/286 (12%)

Query: 228 EQSLKEFRNFVDTHSNVVEACTLFAQVLVDQEDFDGAEEYFNRSIRVDPENASLYVHRAM 287
           + ++ +F   ++ + N  +          D  D  GA   F++ I   P N+  Y +R +
Sbjct: 5   QGAISDFTQAINLNPNFAQPYYNRGATRNDLGDKQGAINDFSQFINFYPRNSLAYFNRGI 64

Query: 288 LMLQARGNVDEAIKLIEKAISIDKSCMFAYETLGTIEVQRGRLEEAVKCFNKALPLARDE 347
              +  G+   AI    + I ++ + + AY   G      G    A+  F   + L    
Sbjct: 65  AWHEL-GDKQRAISDFTQVIKLNPNNVAAYYNRGASRSDLGDKHGAINDFTTVINL---N 120

Query: 348 AELSHIYSLRDAAIAQMKVCERYNIKKKVSPRSQNITKNEKLAIKQLRENNDIIIRPADK 407
              +  Y  R  A        R+N+  K    S + T++ +L  +               
Sbjct: 121 PNFAQPYYNRGLA--------RHNLGDKQGAIS-DFTQSLRLDYR--------------- 156

Query: 408 GGKTVVMDKADYTQKMTSILNSNDYEIIPGDPTKTIEESEKYGNLENESG-QKHAASDFT 466
                  D   Y  +  +  +  D +    D T+ I+ S  +    N  G  +H   D  
Sbjct: 157 -------DPTAYNNRGIARYDMGDRQGAINDFTQAIQISPNFAQAYNNRGLARHNMGDKQ 209

Query: 467 KAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIAL 512
            A +D  +A +++PN A +Y  RG      G  E A+R+ +K   L
Sbjct: 210 GAISDFTQAIQINPNFAQAYNNRGATRNDLGDKEGAIRDFNKASQL 255


>gi|300868250|ref|ZP_07112881.1| TPR repeat-containing protein [Oscillatoria sp. PCC 6506]
 gi|300333774|emb|CBN58065.1| TPR repeat-containing protein [Oscillatoria sp. PCC 6506]
          Length = 728

 Score = 66.6 bits (161), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 55/217 (25%), Positives = 103/217 (47%), Gaps = 13/217 (5%)

Query: 148 HAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVA 207
           +A    T+A A    A +  P+ A +Y   G +    GQ EEA+R   + +A NP++  A
Sbjct: 28  YAQGKLTEAIAFCRRALEAKPDWAPAYVTMGNVQQAQGQIEEAIRFYSEALAFNPDYAEA 87

Query: 208 RAQRHFVVHKMIVPGDRERVEQSLKEFRNFVDTHSNVVEACTLFAQVLVDQEDFDGAEEY 267
            A    +++K      + R  +++  +   +    ++  A       L  Q   + A+ Y
Sbjct: 88  YANLGSMLYK------QGRFVEAIVNYEKAIGLKPDLAAAYWNLGNALKQQGKLEEAKSY 141

Query: 268 FNRSIRVDPE--NASLYVHRAMLMLQARGNVDEAIKLIEKAISIDKSCMFAYETLGTIEV 325
             ++I+++P+      Y+ R    L  +G + EA+   ++AI+I    + AY  +G +  
Sbjct: 142 QQKAIKINPQLGGVEFYLDRGD-ELANQGKLSEAVAAWKRAITIKPDSVDAYCQIGIVLR 200

Query: 326 QRGRLEEAVKCFNKALPLARDEAELSHIY---SLRDA 359
            +G+L+EA+    KAL +  D A ++H +    LRDA
Sbjct: 201 YQGKLKEAIPYLQKALEIKPDFA-IAHQHLCGILRDA 236



 Score = 53.5 bits (127), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 63/281 (22%), Positives = 111/281 (39%), Gaps = 66/281 (23%)

Query: 239 DTHSNVVEACTLFAQVLVDQEDFDGAEEYFNRSIRVDPENASLYVHRAMLMLQARGNVDE 298
           +T     +A T  A+V   Q     A  +  R++   P+ A  YV    +  QA+G ++E
Sbjct: 11  ETKPEDAQALTQAAEVYYAQGKLTEAIAFCRRALEAKPDWAPAYVTMGNVQ-QAQGQIEE 69

Query: 299 AIKLIEKAISIDKSCMFAYETLGTIEVQRGRLEEAVKCFNKALPLARDEAELSHIYSLRD 358
           AI+   +A++ +     AY  LG++  ++GR  EA+  + KA+ L  D A  +  ++L +
Sbjct: 70  AIRFYSEALAFNPDYAEAYANLGSMLYKQGRFVEAIVNYEKAIGLKPDLA--AAYWNLGN 127

Query: 359 AAIAQMKVCERYNIKKKVSPRSQNITKNEKLAIKQLRENNDIIIRPADKGGKTVVMDKAD 418
           A   Q K+ E  + ++K       I  N +L                  GG    +D+ D
Sbjct: 128 ALKQQGKLEEAKSYQQKA------IKINPQL------------------GGVEFYLDRGD 163

Query: 419 YTQKMTSILNSNDYEIIPGDPTKTIEESEKYGNLENESGQKHAASDFTKAFADLDEAEKV 478
                                            L N+          ++A A    A  +
Sbjct: 164 --------------------------------ELANQ-------GKLSEAVAAWKRAITI 184

Query: 479 DPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVA 519
            P+  D+Y Q G +    G+ +EA+  L K + + P+F +A
Sbjct: 185 KPDSVDAYCQIGIVLRYQGKLKEAIPYLQKALEIKPDFAIA 225


>gi|296109346|ref|YP_003616295.1| TPR repeat-containing protein [methanocaldococcus infernus ME]
 gi|295434160|gb|ADG13331.1| TPR repeat-containing protein [Methanocaldococcus infernus ME]
          Length = 534

 Score = 66.6 bits (161), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 49/169 (28%), Positives = 87/169 (51%), Gaps = 7/169 (4%)

Query: 173 SYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQRHFVVHKMIVPGDRERVEQSLK 232
            YY++G  Y   G+YE+A+   DK I L+PN   A   +   ++K+      ER E++++
Sbjct: 5   KYYEKGLKYYNEGRYEKAIECFDKAIKLDPNNPAAWYYKADSLYKL------ERYEKAIE 58

Query: 233 EFRNFVDTHSNVVEACTLFAQVLVDQEDFDGAEEYFNRSIRVDPENASLYVHRAMLMLQA 292
            F   +    N   A    A  L   E ++ A E F+++I++DP N + + ++A  + + 
Sbjct: 59  CFDKAIKLDPNNPAAWYYKADSLYKLERYEKAIECFDKAIKLDPNNPAAWYYKADSLYKL 118

Query: 293 RGNVDEAIKLIEKAISIDKSCMFAYETLGTIEVQRGRLEEAVKCFNKAL 341
               ++AI+  +KAI +D +   A+   G I  + G+ EE  K + KAL
Sbjct: 119 E-RYEKAIECFDKAIKLDPNNPAAWYYKGIILAKLGKHEEESKKYEKAL 166



 Score = 62.0 bits (149), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 48/191 (25%), Positives = 89/191 (46%), Gaps = 27/191 (14%)

Query: 153 FTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQRH 212
           + KA    D+A K+DPN   ++Y +        +YE+A+   DK I L+PN   A   + 
Sbjct: 19  YEKAIECFDKAIKLDPNNPAAWYYKADSLYKLERYEKAIECFDKAIKLDPNNPAAWYYKA 78

Query: 213 FVVHKMIVPGDRERVEQSLKEFRNFVDTHSNVVEACTLFAQVLVDQEDFDGAEEYFNRSI 272
             ++K+      ER E++++ F   +    N   A    A  L   E ++ A E F+++I
Sbjct: 79  DSLYKL------ERYEKAIECFDKAIKLDPNNPAAWYYKADSLYKLERYEKAIECFDKAI 132

Query: 273 RVDPENASLYVHRAMLMLQARGNVDEAIKLIEKAISIDKSCMFAYETLGTIEVQRGRLEE 332
           ++DP N + + ++ +++ +  G  +E  K  EKA+                     + +E
Sbjct: 133 KLDPNNPAAWYYKGIILAKL-GKHEEESKKYEKALD--------------------KYKE 171

Query: 333 AVKCFNKALPL 343
           A++CF K L +
Sbjct: 172 AIECFKKVLEI 182



 Score = 42.0 bits (97), Expect = 0.80,   Method: Compositional matrix adjust.
 Identities = 29/114 (25%), Positives = 54/114 (47%), Gaps = 7/114 (6%)

Query: 147 LHAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHV 206
           L+    + KA    D+A K+DPN   ++Y +        +YE+A+   DK I L+PN   
Sbjct: 81  LYKLERYEKAIECFDKAIKLDPNNPAAWYYKADSLYKLERYEKAIECFDKAIKLDPNNPA 140

Query: 207 ARAQRHFVVHKMIVPGDRE----RVEQSLKEFRNFVDTHSNVVEACTLFAQVLV 256
           A   +  ++ K+   G  E    + E++L +++  ++    V+E    F   L+
Sbjct: 141 AWYYKGIILAKL---GKHEEESKKYEKALDKYKEAIECFKKVLEIDPNFYSPLI 191


>gi|119484720|ref|ZP_01619202.1| TPR repeat protein [Lyngbya sp. PCC 8106]
 gi|119457538|gb|EAW38662.1| TPR repeat protein [Lyngbya sp. PCC 8106]
          Length = 335

 Score = 66.6 bits (161), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 60/238 (25%), Positives = 105/238 (44%), Gaps = 34/238 (14%)

Query: 117 AIEDLTQLVEDTSVDPKIKVNAHIKRAVVHLHAASDFTKAFADLDEAEKVDPNVADSYYQ 176
           A++DL Q++   S +P   + A+  RA+++ H   D+  A  DLD A +++P ++D+Y  
Sbjct: 22  ALDDLNQVL---SCNPNHAI-AYTNRALLYYHL-KDYKNAIKDLDYALQINPKLSDAYLN 76

Query: 177 RGQIYCLFGQYEEALRNLDKTIALNP-------NFHVARAQRHFVVHKMIVPGDRERVEQ 229
           RG  +   G+YE+A+++L   +  NP       N  +A AQ                 E 
Sbjct: 77  RGNAWRHLGKYEKAIKDLKIALKFNPTSDAIYNNLGLAIAQ-------------SGEYED 123

Query: 230 SLKEFRNFV----DTHSNVVEACTLFAQVLVDQEDFDGAEEYFNRSIRVDPENASLYVHR 285
           +LK +   +      H         F      Q+    A + FN++I + P     Y++R
Sbjct: 124 ALKYYNKALLFNPKNHKTYHNRGRSFYMGGRKQD----AIQDFNKTIELSPNYTKAYINR 179

Query: 286 AMLMLQARGNVDEAIKLIEKAISIDKSCMFAYETLGTIEVQRGRLEEAVKCFNKALPL 343
            +   Q  G    AI+    A+ ID   ++AY   G +      +  A+  FN+A+ L
Sbjct: 180 GLCHHQL-GEHQAAIEDYNTALKIDAYNVYAYYNRGCVYYSLKEMRSAIDDFNQAIQL 236



 Score = 56.6 bits (135), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 45/193 (23%), Positives = 83/193 (43%), Gaps = 7/193 (3%)

Query: 151 SDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQ 210
            ++  A  DL++    +PN A +Y  R  +Y     Y+ A+++LD  + +NP    A   
Sbjct: 17  GNYRGALDDLNQVLSCNPNHAIAYTNRALLYYHLKDYKNAIKDLDYALQINPKLSDAYLN 76

Query: 211 RHFVVHKMIVPGDRERVEQSLKEFRNFVDTHSNVVEACTLFAQVLVDQEDFDGAEEYFNR 270
           R      +   G  E+  + LK    F  T   +     L    +    +++ A +Y+N+
Sbjct: 77  RGNAWRHL---GKYEKAIKDLKIALKFNPTSDAIYNNLGL---AIAQSGEYEDALKYYNK 130

Query: 271 SIRVDPENASLYVHRAMLMLQARGNVDEAIKLIEKAISIDKSCMFAYETLGTIEVQRGRL 330
           ++  +P+N   Y +R        G   +AI+   K I +  +   AY   G    Q G  
Sbjct: 131 ALLFNPKNHKTYHNRGRSFYMG-GRKQDAIQDFNKTIELSPNYTKAYINRGLCHHQLGEH 189

Query: 331 EEAVKCFNKALPL 343
           + A++ +N AL +
Sbjct: 190 QAAIEDYNTALKI 202



 Score = 50.8 bits (120), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 57/272 (20%), Positives = 120/272 (44%), Gaps = 21/272 (7%)

Query: 57  NESHELDLLSKAKRAFEHEDYLTAIRHCTEEIESTSSNHTKALARLLRATVYIFTSQSTK 116
           N +H +   ++A   +  +DY  AI+     ++    N   + A L R   +    +  K
Sbjct: 33  NPNHAIAYTNRALLYYHLKDYKNAIKDLDYALQI---NPKLSDAYLNRGNAWRHLGKYEK 89

Query: 117 AIEDLTQLVEDTSVDPKIKVNAHIKRAVVHLHAASDFTKAFADLDEAEKVDPNVADSYYQ 176
           AI+DL   ++       I  N  +  A      + ++  A    ++A   +P    +Y+ 
Sbjct: 90  AIKDLKIALKFNPTSDAIYNNLGLAIA-----QSGEYEDALKYYNKALLFNPKNHKTYHN 144

Query: 177 RGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQRHFVVHKMIVPGDRERVEQSLKEFRN 236
           RG+ + + G+ ++A+++ +KTI L+PN+  A   R    H++   G+    + +++++  
Sbjct: 145 RGRSFYMGGRKQDAIQDFNKTIELSPNYTKAYINRGLCHHQL---GEH---QAAIEDYNT 198

Query: 237 FVDTHSNVVEACTLFAQVLVDQEDFDGAEEYFNRSIRVDPENASLYVHRAMLMLQARGNV 296
            +   +  V A      V    ++   A + FN++I++DP     Y++R +   ++ GN 
Sbjct: 199 ALKIDAYNVYAYYNRGCVYYSLKEMRSAIDDFNQAIQLDPTYIKAYLNRGLARYKS-GNQ 257

Query: 297 DEAIKLIEKAISIDKSCMFAYETLGTIEVQRG 328
            EA K     + ++      Y      + QRG
Sbjct: 258 TEANKDFYHVMCVNADAYVYY------QAQRG 283



 Score = 50.8 bits (120), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 66/277 (23%), Positives = 105/277 (37%), Gaps = 38/277 (13%)

Query: 250 LFAQVLVD--QEDFDGAEEYFNRSIRVDPENASLYVHRAMLMLQARGNVDEAIKLIEKAI 307
           L+ Q L+   Q ++ GA +  N+ +  +P +A  Y +RA+L    + +   AIK ++ A+
Sbjct: 6   LYQQGLIKARQGNYRGALDDLNQVLSCNPNHAIAYTNRALLYYHLK-DYKNAIKDLDYAL 64

Query: 308 SIDKSCMFAYETLGTIEVQRGRLEEAVKCFNKALPLARDEAELSHIYSLRDAAIAQMKVC 367
            I+     AY   G      G+ E+A+K    AL                          
Sbjct: 65  QINPKLSDAYLNRGNAWRHLGKYEKAIKDLKIAL-------------------------- 98

Query: 368 ERYNIKKKVSPRSQNITKNEKLAIKQLRENNDIIIRPADKGGKTVVMDKADYTQKMTSIL 427
                  K +P S  I  N  LAI Q  E  D + +  +K       +   Y  +  S  
Sbjct: 99  -------KFNPTSDAIYNNLGLAIAQSGEYEDAL-KYYNKALLFNPKNHKTYHNRGRSFY 150

Query: 428 NSNDYEIIPGDPTKTIEESEKYGNLE-NESGQKHAASDFTKAFADLDEAEKVDPNVADSY 486
                +    D  KTIE S  Y     N     H   +   A  D + A K+D     +Y
Sbjct: 151 MGGRKQDAIQDFNKTIELSPNYTKAYINRGLCHHQLGEHQAAIEDYNTALKIDAYNVYAY 210

Query: 487 YQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQR 523
           Y RG +Y    +   A+ + ++ I L+P +  A   R
Sbjct: 211 YNRGCVYYSLKEMRSAIDDFNQAIQLDPTYIKAYLNR 247



 Score = 46.6 bits (109), Expect = 0.033,   Method: Compositional matrix adjust.
 Identities = 40/167 (23%), Positives = 73/167 (43%), Gaps = 41/167 (24%)

Query: 175 YQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQRHFVVHKMIVPGDRERVEQSLKEF 234
           YQ+G I    G Y  AL +L++ ++ NPN  +A   R  + +              LK++
Sbjct: 7   YQQGLIKARQGNYRGALDDLNQVLSCNPNHAIAYTNRALLYY-------------HLKDY 53

Query: 235 RNFVDTHSNVVEACTLFAQVLVDQEDFDGAEEYFNRSIRVDPENASLYVHRAMLMLQARG 294
           +N +                    +D D A       ++++P+ +  Y++R     +  G
Sbjct: 54  KNAI--------------------KDLDYA-------LQINPKLSDAYLNRGN-AWRHLG 85

Query: 295 NVDEAIKLIEKAISIDKSCMFAYETLGTIEVQRGRLEEAVKCFNKAL 341
             ++AIK ++ A+  + +    Y  LG    Q G  E+A+K +NKAL
Sbjct: 86  KYEKAIKDLKIALKFNPTSDAIYNNLGLAIAQSGEYEDALKYYNKAL 132


>gi|407261987|ref|XP_003085859.2| PREDICTED: tetratricopeptide repeat protein 6 [Mus musculus]
          Length = 901

 Score = 66.6 bits (161), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 56/236 (23%), Positives = 114/236 (48%), Gaps = 10/236 (4%)

Query: 100 ARLLRATVYIFTSQSTKAIEDLTQLVEDTSVDPKIKVNAHIKRAVVHLHAASDFTKAFAD 159
           A L R   Y    + +KAI +  + ++   + P+  V A+I R V+  +  + +     D
Sbjct: 454 AYLSRVAYYGLKGRYSKAILNCNEAIK---LYPE-SVRAYICRGVLKYYNRT-YKLGITD 508

Query: 160 LDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQRHFVVHKMI 219
           L  A K+D N   +YY R   Y   G+++ ALR+    + L+   ++A    + ++++ +
Sbjct: 509 LSTAIKMDKNNYTAYYNRALCYTKIGEHQMALRDYGIVLLLDAGENIA---LNTLINRGL 565

Query: 220 VPGDRERVEQSLKEFRNFVDTHSNVVEACTLFAQVLVDQEDFDGAEEYFNRSIRVDPENA 279
           +  + ++   +L++F+         V  C   A      ++F+GA E+F R+I+++P   
Sbjct: 566 IYTELKQYGFALEDFKQAALMSGTSVSLCQATATCHHRIKEFEGAVEFFTRAIKINPHYV 625

Query: 280 SLYVHR--AMLMLQARGNVDEAIKLIEKAISIDKSCMFAYETLGTIEVQRGRLEEA 333
             Y+ R  + +       + +A K   KA+ +D SC+ A  +LG     +G+ ++A
Sbjct: 626 DAYIGRGNSYMEYSQEDAMIQAQKDFLKALHLDPSCLKARISLGYNLQAQGKFQKA 681



 Score = 49.7 bits (117), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 83/417 (19%), Positives = 157/417 (37%), Gaps = 83/417 (19%)

Query: 169 NVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQRHFVVHKMIVPGDRERVE 228
           N+A  Y +RG IY   G+ + A+ +L + I   P F  A   RHF+         +++V 
Sbjct: 157 NLAFVYCRRGAIYRKLGKLQSAMNDLQEAIFQEPFFLNAYWHRHFIYL------FQDKVN 210

Query: 229 QSLKEFRNFVDTHSNVVEACTLFAQVLVDQEDFDGAEEYFNRSIRVDPENASLYVHRAML 288
            +L +       + N  EA    A++   ++D   A   ++++I+  P++A LY  R  +
Sbjct: 211 DALDDLNFITKYNKNHAEAYLSKAEIF-REKDITLAILNYSQAIKCRPKDADLYFKRGEM 269

Query: 289 M-------------------------LQARG----------------------NVDEAIK 301
                                     ++  G                      N D+AI 
Sbjct: 270 YEKTNKVLAIDDYSKVINYVKFAETDVKVEGENLKSIIEMSPIQEALIYSFCENHDKAIH 329

Query: 302 LIEKAISIDKSCMFAYETLGTIEVQRGRLEEAVKCFNKALPLARDEAELSHIYSLRDAAI 361
           ++E  I+  K  +  Y  L   +++  R++E+V+ F KAL L     +     S+    +
Sbjct: 330 ILEGVIA-SKPDISTYALLAKAQMKAKRIKESVRLFKKALELYTFSDKGPVATSVSAECL 388

Query: 362 AQMKVC-----------ERYNIKKKVSPRSQNITKNEKLAIKQLRENNDIIIRPADKGGK 410
             + +C           E +    K +P       +  L   +L + N I+        +
Sbjct: 389 YNLGLCYMEEGNFQMAFESFTKAVKANPEFAEAFYHRGLCKVKLNKQNSIL-----DFNR 443

Query: 411 TVVMDKADYTQKMTSILNSNDYEIIPGDPTKTIEESEKYGNLENESGQKHAASDFTKAF- 469
            + ++   Y   ++ +     Y  + G  +K I    +   L  ES + +      K + 
Sbjct: 444 ALTLNPKHYQAYLSRV----AYYGLKGRYSKAILNCNEAIKLYPESVRAYICRGVLKYYN 499

Query: 470 -------ADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVA 519
                   DL  A K+D N   +YY R   Y   G+++ ALR+    + L+   ++A
Sbjct: 500 RTYKLGITDLSTAIKMDKNNYTAYYNRALCYTKIGEHQMALRDYGIVLLLDAGENIA 556



 Score = 40.8 bits (94), Expect = 1.8,   Method: Compositional matrix adjust.
 Identities = 54/243 (22%), Positives = 102/243 (41%), Gaps = 20/243 (8%)

Query: 104 RATVYIFTSQSTKAIEDLTQ--LVEDTSVDPKIKVNAHIKRAVVHLHAASDFTKAFADLD 161
           R  +Y    Q   A+ED  Q  L+  TSV      +     A  H H   +F  A     
Sbjct: 563 RGLIYTELKQYGFALEDFKQAALMSGTSV------SLCQATATCH-HRIKEFEGAVEFFT 615

Query: 162 EAEKVDPNVADSYYQRGQIYCLFGQYE---EALRNLDKTIALNPNFHVARAQRHFVVHKM 218
            A K++P+  D+Y  RG  Y  + Q +   +A ++  K + L+P+   AR    + +   
Sbjct: 616 RAIKINPHYVDAYIGRGNSYMEYSQEDAMIQAQKDFLKALHLDPSCLKARISLGYNLQA- 674

Query: 219 IVPGDRERVEQSLKEFRNFVDTHSNVVEACTLFAQVLVDQEDFDGAEEYFNRSIRVDPEN 278
                + + +++   F   ++++     A    A V +   ++  A +  N +I+++   
Sbjct: 675 -----QGKFQKAWIHFTVGIESNPKSYLAYEGRAVVCLQMSNYFAAMQDINCAIKIN-ST 728

Query: 279 ASLYVHRAMLMLQARGNVDEAIKLIEKAISIDKSCMFAYETLGTIEVQRGRLEEAVKCFN 338
           A    +R ++  +  G    A+   + AIS++ S   AY   G I +   +  +A   F+
Sbjct: 729 AEFLTNRGVIH-EFMGQQQSAMADYQAAISLNPSYSLAYFNAGNIYLHHRQFSQASDYFS 787

Query: 339 KAL 341
            AL
Sbjct: 788 TAL 790



 Score = 40.0 bits (92), Expect = 3.3,   Method: Compositional matrix adjust.
 Identities = 57/240 (23%), Positives = 99/240 (41%), Gaps = 45/240 (18%)

Query: 80  AIRHCTEEIESTSSNHTKALARLLRATVYIFTSQSTKAIEDLTQLVEDTSVDPKIKVNAH 139
           A  H T  IES   ++   LA   RA V +  S    A++D         ++  IK+N+ 
Sbjct: 681 AWIHFTVGIESNPKSY---LAYEGRAVVCLQMSNYFAAMQD---------INCAIKINST 728

Query: 140 IK----RAVVHLHAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLD 195
            +    R V+H         A AD   A  ++P+ + +Y+  G IY    Q+ +A     
Sbjct: 729 AEFLTNRGVIHEFMGQQ-QSAMADYQAAISLNPSYSLAYFNAGNIYLHHRQFSQASDYFS 787

Query: 196 KTIALNPNFHVARAQRHFVVHKMIVPGDRERVEQSLKEFRNFVDTHSNVVEACTLFAQVL 255
             +  NP    A      ++++ +     ++ E++ K+F       S  +E C  +A + 
Sbjct: 788 TALKFNPENEYA------LMNRAVTNSVLKKYEEAEKDF-------SCAMERCPHWAALY 834

Query: 256 VDQEDF-------DGAEEYFNRSIRVDPENASLYVHRAMLMLQARGNVDEAIKLIEKAIS 308
            ++  F         AEE     + + P+ A +Y  RA    Q RG +     LI +A+S
Sbjct: 835 FNRASFYVYLKKYKLAEEDLGIGLSLKPDEAIMYNLRA----QVRGKMG----LIAEAMS 886


>gi|406981058|gb|EKE02578.1| hypothetical protein ACD_20C00357G0001 [uncultured bacterium]
          Length = 536

 Score = 66.6 bits (161), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 47/192 (24%), Positives = 90/192 (46%), Gaps = 4/192 (2%)

Query: 151 SDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQ 210
           SD+  A     +   ++PN A  Y     +  L G+++EA+      + LNPN       
Sbjct: 291 SDYDSAIEMYRKLIHLNPNDAVFYSNLANLLYLKGKFDEAISAYQTAVTLNPNKRWTSVI 350

Query: 211 RHFVVHKMIVPGDRERVEQSLKEFRNFVDTHSNVVEACTLFAQVLVDQEDFDGAEEYFNR 270
              + +  I    +E V+ ++  ++N    +   ++          D+ D++ A   +  
Sbjct: 351 AQTLGY--IFQESKENVDAAISSYQNATLLNPEDIDTYISLGSAFYDKGDYNNALIVYRT 408

Query: 271 SIRVDPENASLYVHRAMLMLQARGNVDEAIKLIEKAISIDKSCMFAYETLGTIEV-QRGR 329
           ++ +DP NA ++ +   L L  +G +DE+IK  E AI +D S   AY  LG I +   G 
Sbjct: 409 ALEIDPNNARIHCNLGYL-LWGKGLIDESIKEYELAIKLDPSYDIAYNNLGVIYLDDLGY 467

Query: 330 LEEAVKCFNKAL 341
           +++A++ F +A+
Sbjct: 468 VQKAIEVFQQAI 479



 Score = 43.5 bits (101), Expect = 0.27,   Method: Compositional matrix adjust.
 Identities = 38/146 (26%), Positives = 68/146 (46%), Gaps = 11/146 (7%)

Query: 185 GQYEEALRNLDKTIALNPNFHVARAQRHFVVHKMIVPGDRER----VEQSLKEFRNFVDT 240
           G Y E  RN+ + I L     +    R   ++  I+ GD  R    +  ++ E+R  +  
Sbjct: 216 GYYLEKTRNVYRAIELYSQ-AIEETPRFLPLY--ILLGDVYRSIGKISDAINEYRMALWL 272

Query: 241 HSNVVEACTLFAQVLVDQEDFDGAEEYFNRSIRVDPENASLYVHRAMLMLQARGNVDEAI 300
            S  + A      +  +Q D+D A E + + I ++P +A  Y + A L L  +G  DEAI
Sbjct: 273 DSTSITAYKSLCSIYEEQSDYDSAIEMYRKLIHLNPNDAVFYSNLANL-LYLKGKFDEAI 331

Query: 301 KLIEKAISIDKSCMFAY---ETLGTI 323
              + A++++ +  +     +TLG I
Sbjct: 332 SAYQTAVTLNPNKRWTSVIAQTLGYI 357


>gi|384210214|ref|YP_005595934.1| hypothetical protein Bint_2760 [Brachyspira intermedia PWS/A]
 gi|343387864|gb|AEM23354.1| TPR domain-containing protein [Brachyspira intermedia PWS/A]
          Length = 800

 Score = 66.6 bits (161), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 54/226 (23%), Positives = 106/226 (46%), Gaps = 12/226 (5%)

Query: 116 KAIEDLTQLVEDTSVDPKIKVNAHIKRAVVHLHAASDFTKAFADLDEAEKVDPNVADSYY 175
           +A+ED  + +E    D  +  N  + +  +HL     + +A  D D+A  +    A+ YY
Sbjct: 374 EALEDYNKAIELEQNDAYLYNNRALLKGRMHL-----YKEAIEDFDKAISLYSEDAEFYY 428

Query: 176 QRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQRHFVVHKMIVPGDRERVEQSLKEFR 235
            RG       + +EAL+ ++K I L+  +  A  +R  + ++          + ++K+F+
Sbjct: 429 YRGLTNSYLNELDEALKYINKAIELDSKYINAYNERGLIHYR------NTDYKSAIKDFK 482

Query: 236 NFVDTHSNVVEACTLFAQVLVDQEDFDGAEEYFNRSIRVDPENASLYVHRAMLMLQARGN 295
             ++  +  V A    A      E+++ A +Y++R I +DP     Y +RA+  ++    
Sbjct: 483 KVIELDNESVYANYHLALSYDALEEYETALKYYSRVIELDPTTPDPYYNRALAEIEMEL- 541

Query: 296 VDEAIKLIEKAISIDKSCMFAYETLGTIEVQRGRLEEAVKCFNKAL 341
            +EAI+   K I ID + M AY  +G         ++A+ C+ K +
Sbjct: 542 YNEAIEDFYKVIEIDNTIMDAYFNIGICYDSLKEHQKAIDCYTKVI 587



 Score = 58.9 bits (141), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 86/412 (20%), Positives = 172/412 (41%), Gaps = 53/412 (12%)

Query: 108 YIFTSQSTKAIEDL-TQLVEDTSVDPKIKVNAHIKRAV-VHLHAASDFTKAFADLDEAEK 165
           Y +  +  +AI++    L+ D  +D       H KR + ++  A SDF K         +
Sbjct: 160 YFYLGRYEEAIKNFDISLLLDDEIDDAYYYRGHSKRYLNMYEEALSDFNKVI-------Q 212

Query: 166 VDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQRHFVVHKMIVPGDRE 225
           +  + +DSYY +G      G YE+A+ + DK I L+ N+  A   R    + +      E
Sbjct: 213 LRDDDSDSYYSKGLTEFFLGLYEDAINDFDKAIELDGNYSNAYYFRGLTKNSL------E 266

Query: 226 RVEQSLKEFRNFVD--THSNVVEACTLFAQVLVDQEDFDGAEEYFNRSIRVDPENASLYV 283
             ++++ +++  ++     N++        +     ++  A  Y+ + I ++ +    Y 
Sbjct: 267 LYKEAMDDYKKALEYADEDNIISIYNDMGLLEYKLGNYKEAINYYTKIIEINDDIYYSYY 326

Query: 284 HRAMLMLQARGNVDEAIKLIEKAISIDKSCMFAYETLGTIEVQRGRLEEAVKCFNKALPL 343
           +RA L  ++    ++A+    +AI ++    ++Y   G I+ +    +EA++ +NKA+ L
Sbjct: 327 NRA-LAEESLELYEDALADYSRAIELNPEDTYSYNNRGLIKNEMQMYDEALEDYNKAIEL 385

Query: 344 ARDEAELSHIYSLRDAAIAQMKVCERYNIKKKVSPRSQNITKNEKLAIKQLRENNDIIIR 403
            +++A L +  +L               +K ++    + I   +K AI    E+ +    
Sbjct: 386 EQNDAYLYNNRAL---------------LKGRMHLYKEAIEDFDK-AISLYSEDAEFYYY 429

Query: 404 PADKGGKTVVMDKADYTQKMTSILNSNDYEIIPGDPTKTIEESEKYGNLENESGQKHA-A 462
              +G     +++ D   K  +               K IE   KY N  NE G  H   
Sbjct: 430 ---RGLTNSYLNELDEALKYIN---------------KAIELDSKYINAYNERGLIHYRN 471

Query: 463 SDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNP 514
           +D+  A  D  +  ++D     + Y     Y    +YE AL+   + I L+P
Sbjct: 472 TDYKSAIKDFKKVIELDNESVYANYHLALSYDALEEYETALKYYSRVIELDP 523



 Score = 53.9 bits (128), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 92/432 (21%), Positives = 176/432 (40%), Gaps = 67/432 (15%)

Query: 126 EDTSVDPKIKVNAHIKRAVVHLHAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFG 185
           ED +      V+ +  R + + +    + +A  D D+  ++ P+ +++YY RG      G
Sbjct: 72  EDINTTHDTLVDVYYNRGLSYFNLKK-YEEAIKDFDKVIELSPDKSNAYYNRGHSKSYLG 130

Query: 186 QYEEALRNLDKTIALNPNFHVARAQRHFVVHKMIVPGDRERVEQSLKEFRNFVDTHSNVV 245
           QYEE +++  K +  N +   A A  +  +    +     R E+++K F   +     + 
Sbjct: 131 QYEEGIKDFKKVLEFNED--DAEAIYYIGLGYFYLG----RYEEAIKNFDISLLLDDEID 184

Query: 246 EA----------CTLFAQVLVDQEDFDGAEEYFNRSIRVDPENASLYVHRAMLMLQARGN 295
           +A            ++ + L D          FN+ I++  +++  Y  + +      G 
Sbjct: 185 DAYYYRGHSKRYLNMYEEALSD----------FNKVIQLRDDDSDSYYSKGLTEF-FLGL 233

Query: 296 VDEAIKLIEKAISIDKSCMFAYETLGTIEVQRGRLEEAVKCFNKALPLARDEAELSHIYS 355
            ++AI   +KAI +D +   AY   G  +      +EA+  + KAL  A DE  +  IY+
Sbjct: 234 YEDAINDFDKAIELDGNYSNAYYFRGLTKNSLELYKEAMDDYKKALEYA-DEDNIISIYN 292

Query: 356 LRDAAIAQMKVCERYNIKKKVSPRSQNITKNEKLAIKQLRENNDIIIRPADKGGKTVVMD 415
             D  + + K+    N K+ ++  ++ I  N+ +             R   +    +  D
Sbjct: 293 --DMGLLEYKLG---NYKEAINYYTKIIEINDDIYYSYYN-------RALAEESLELYED 340

Query: 416 K-ADYTQKMTSILNSND----------------YEIIPGDPTKTIE----ESEKYGNLEN 454
             ADY++ +   LN  D                Y+    D  K IE    ++  Y N   
Sbjct: 341 ALADYSRAIE--LNPEDTYSYNNRGLIKNEMQMYDEALEDYNKAIELEQNDAYLYNNRAL 398

Query: 455 ESGQKHAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNP 514
             G+ H    + +A  D D+A  +    A+ YY RG       + +EAL+ ++K I L+ 
Sbjct: 399 LKGRMHL---YKEAIEDFDKAISLYSEDAEFYYYRGLTNSYLNELDEALKYINKAIELDS 455

Query: 515 NFHVARAQRHFV 526
            +  A  +R  +
Sbjct: 456 KYINAYNERGLI 467


>gi|381160368|ref|ZP_09869600.1| putative O-linked N-acetylglucosamine transferase, SPINDLY family
           [Thiorhodovibrio sp. 970]
 gi|380878432|gb|EIC20524.1| putative O-linked N-acetylglucosamine transferase, SPINDLY family
           [Thiorhodovibrio sp. 970]
          Length = 717

 Score = 66.6 bits (161), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 64/251 (25%), Positives = 109/251 (43%), Gaps = 24/251 (9%)

Query: 160 LDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQRHFVVHKMI 219
           +D A + D  VA  Y   G +     + EEAL   D  + LNP F  A   R  V+    
Sbjct: 50  IDRAIQSDSQVALFYNHYGLVLYALSRTEEALAAFDAALKLNPGFVKAHNNRGAVLMGA- 108

Query: 220 VPGDRERVEQSLKEFRNFVDTHSNVVEACTLFAQVLVDQEDFDGAEEYFNRSIRVDP--E 277
                 R++++L  F N V       E     A+VL +      + E F  +I +DP   
Sbjct: 109 -----GRLKEALAAFNNAVGLEPGNQEGHVNRAKVLGELGHLGESVESFQTAIAIDPCLS 163

Query: 278 NASLYVHRAMLMLQARGNVDEAIKLIEKAISIDKSCMFAYETLGTIEVQRGRLEEAVKCF 337
           +A   +   + ML   G + +A+   + A+ +D      Y   G + V+ GRL+EA + +
Sbjct: 164 DAHFQLGNVLRML---GRMQDALSAYDHALKLDDKDASVYANRGNVLVELGRLKEAEESY 220

Query: 338 NKALPLARDEAELSHIYSLRDAAIAQMK-------VCERYNIKKKVSPRSQNITKNEKLA 390
            KAL + +D     HI +L + A   +K       +C  +     ++P++  +  N   A
Sbjct: 221 RKALAVDQD-----HIVTLNNWASLLLKQGKSREAICV-FETALAINPKNPEVNNNYGAA 274

Query: 391 IKQLRENNDII 401
           ++ + E N+ I
Sbjct: 275 LRDVGELNEAI 285



 Score = 62.8 bits (151), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 51/219 (23%), Positives = 105/219 (47%), Gaps = 15/219 (6%)

Query: 147 LHAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPN--- 203
           L+A S   +A A  D A K++P    ++  RG +    G+ +EAL   +  + L P    
Sbjct: 71  LYALSRTEEALAAFDAALKLNPGFVKAHNNRGAVLMGAGRLKEALAAFNNAVGLEPGNQE 130

Query: 204 FHVARAQRHFVVHKMIVPGDRERVEQSLKEFRNFVDTHSNVVEACTLFAQVLVDQEDFDG 263
            HV RA+         V G+   + +S++ F+  +     + +A      VL        
Sbjct: 131 GHVNRAK---------VLGELGHLGESVESFQTAIAIDPCLSDAHFQLGNVLRMLGRMQD 181

Query: 264 AEEYFNRSIRVDPENASLYVHRAMLMLQARGNVDEAIKLIEKAISIDKSCMFAYETLGTI 323
           A   ++ ++++D ++AS+Y +R  ++++  G + EA +   KA+++D+  +       ++
Sbjct: 182 ALSAYDHALKLDDKDASVYANRGNVLVEL-GRLKEAEESYRKALAVDQDHIVTLNNWASL 240

Query: 324 EVQRGRLEEAVKCFNKALPLARDEAELSHIY--SLRDAA 360
            +++G+  EA+  F  AL +     E+++ Y  +LRD  
Sbjct: 241 LLKQGKSREAICVFETALAINPKNPEVNNNYGAALRDVG 279



 Score = 60.5 bits (145), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 50/196 (25%), Positives = 90/196 (45%), Gaps = 7/196 (3%)

Query: 148 HAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVA 207
           H   D   A A   E     PN AD+ +  G  +   G+ E+A R +D+ I  +    + 
Sbjct: 4   HRRGDLAGAIAGYKELLNQAPNHADALHLLGLAFYQQGENEQAARLIDRAIQSDSQVAL- 62

Query: 208 RAQRHFVVHKMIVPGDRERVEQSLKEFRNFVDTHSNVVEACTLFAQVLVDQEDFDGAEEY 267
                F  H  +V     R E++L  F   +  +   V+A      VL+       A   
Sbjct: 63  -----FYNHYGLVLYALSRTEEALAAFDAALKLNPGFVKAHNNRGAVLMGAGRLKEALAA 117

Query: 268 FNRSIRVDPENASLYVHRAMLMLQARGNVDEAIKLIEKAISIDKSCMFAYETLGTIEVQR 327
           FN ++ ++P N   +V+RA ++ +  G++ E+++  + AI+ID     A+  LG +    
Sbjct: 118 FNNAVGLEPGNQEGHVNRAKVLGEL-GHLGESVESFQTAIAIDPCLSDAHFQLGNVLRML 176

Query: 328 GRLEEAVKCFNKALPL 343
           GR+++A+  ++ AL L
Sbjct: 177 GRMQDALSAYDHALKL 192


>gi|118369961|ref|XP_001018183.1| TPR Domain containing protein [Tetrahymena thermophila]
 gi|89299950|gb|EAR97938.1| TPR Domain containing protein [Tetrahymena thermophila SB210]
          Length = 3418

 Score = 66.6 bits (161), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 98/440 (22%), Positives = 181/440 (41%), Gaps = 74/440 (16%)

Query: 113  QSTKAIEDLTQLVEDTSVDPKIKVNAHI--KRAVVHLHAASDFTKAFADLDEAEKVDPNV 170
            Q  + +E L    + T ++P+   N  I  K A++ + +  +F +A   +D+  ++ P  
Sbjct: 2903 QDQQYLEALIHYQKQTQINPE---NTEILFKMALIQI-SYDNFNQAKQLIDKLIELKPQD 2958

Query: 171  ADSYYQRGQIYCLFGQYEEALRNLDKTIALNPN-----FHVA----------RAQRHFVV 215
               Y  +  +Y   G  +EA+++ D+++++ P      F++A          + ++ +  
Sbjct: 2959 YLVYSAQAYLYKRQGNLQEAIKSFDQSLSIQPTNTFTLFNLALCHGELGNIKQEKKMYKE 3018

Query: 216  HKMIVPGDRE-------------RVEQSLKEFRNFVDTHSNVVEACTLFAQVLVDQEDFD 262
             + I P DR+             + E++++ F   +       +  T        + D+D
Sbjct: 3019 IQKISPNDRKMLNNLGIIYRQKGKYEKAIQLFSQCIKLDQYFCDYFTNLGLCYYAKGDYD 3078

Query: 263  GAEEYFNRSIRVDPENASLYVHRAMLMLQARGNVDEAIKLIEKAISIDKSCMFAYETLGT 322
            GA  YF +   +D  N    ++ A   L+A+G   +AIK ++K I I+ +   AY  LG 
Sbjct: 3079 GAINYFQKGYTLDRINVECLLNLAS-ALKAKGEPQQAIKYLQKIIKINPNYTAAYYNLGI 3137

Query: 323  IEVQRGRLEEAVKCFNKALPLARDEAELSHIYSLRDAAIAQMKVCERYNIKKKVSPRSQN 382
            I+ Q G + +A   F   L + +D     HI S+   AI                 R QN
Sbjct: 3138 IQKQNGNISDAQTSF--KLSIEKDPY---HINSVIQLAII---------------YREQN 3177

Query: 383  ITKNEKLAIKQLRE---NNDIIIRPADKGGKTVVMDKADYTQKMTSILNSNDYEIIPGDP 439
               N K  +KQ  E   NN++    A+     +   K  + +++ ++L +  Y   P + 
Sbjct: 3178 DYDNSKKLLKQALEIDSNNEL----ANFNIALLYRQKCKHAKELNALLKALSYS--PKNA 3231

Query: 440  TKTIEESEKYGNLENESGQKHAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQY 499
                    KY  L N    +    ++ +A     ++ ++D   A  YY    IY      
Sbjct: 3232 --------KY--LHNIGICQRLQENYQEALIYFKQSVQIDSENAKYYYNLADIYNCLKMP 3281

Query: 500  EEALRNLDKTIALNPNFHVA 519
             E +    K I LNPNF  A
Sbjct: 3282 IEEINCYMKCIQLNPNFERA 3301



 Score = 42.0 bits (97), Expect = 0.82,   Method: Compositional matrix adjust.
 Identities = 48/226 (21%), Positives = 100/226 (44%), Gaps = 20/226 (8%)

Query: 116  KAIEDLTQLVEDTSVDPK-IKVNAHIKRAVVHLHAASDFTKAFADLDEAEKVDPNVADSY 174
            K+   + Q ++    DP+ IK++A +      L    + + +     +    +PN  +  
Sbjct: 2807 KSFALIKQCLDKNPNDPEVIKLHAKV------LQQQGNLSSSIIQYQKYLSSNPNSYEVQ 2860

Query: 175  YQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQRHFVVHKMIVPGDRERVEQSLKEF 234
            Y  G+     G  ++A+ +L K + LNP F              I+    E+ +Q L+  
Sbjct: 2861 YLLGKARLEIGCPDQAIYSLKKCLQLNPKFPNING---------ILGEAYEQDQQYLEAL 2911

Query: 235  RNFV-DTHSNVVEACTLFAQVL--VDQEDFDGAEEYFNRSIRVDPENASLYVHRAMLMLQ 291
             ++   T  N      LF   L  +  ++F+ A++  ++ I + P++  +Y  +A L  +
Sbjct: 2912 IHYQKQTQINPENTEILFKMALIQISYDNFNQAKQLIDKLIELKPQDYLVYSAQAYLY-K 2970

Query: 292  ARGNVDEAIKLIEKAISIDKSCMFAYETLGTIEVQRGRLEEAVKCF 337
             +GN+ EAIK  ++++SI  +  F    L     + G +++  K +
Sbjct: 2971 RQGNLQEAIKSFDQSLSIQPTNTFTLFNLALCHGELGNIKQEKKMY 3016



 Score = 41.2 bits (95), Expect = 1.5,   Method: Compositional matrix adjust.
 Identities = 30/104 (28%), Positives = 52/104 (50%), Gaps = 5/104 (4%)

Query: 258  QEDFDGAEEYFNRSIRVDPENASLYVHRAMLMLQARGNVDEAIKLIEKAISIDKSCMFAY 317
            QE++  A  YF +S+++D ENA  Y + A +    +  ++E I    K I ++ +   A+
Sbjct: 3244 QENYQEALIYFKQSVQIDSENAKYYYNLADIYNCLKMPIEE-INCYMKCIQLNPNFERAH 3302

Query: 318  ETLGTIEVQRGRLEEAVKCFNKALPLARDEAE----LSHIYSLR 357
              LG         +EA+ CF K + +A    +    L +IYSL+
Sbjct: 3303 YNLGIAYENIKNYKEAISCFEKCIEIAPSNDQYFFSLGNIYSLQ 3346



 Score = 38.9 bits (89), Expect = 6.8,   Method: Compositional matrix adjust.
 Identities = 23/64 (35%), Positives = 39/64 (60%), Gaps = 2/64 (3%)

Query: 267  YFNRSIRVDPENASLYVHRAMLMLQARGNVDEAIKLIEKAISIDKSCMFAYETLGTI-EV 325
            Y+NRS+++D +NA  Y +R  ++L  +   + +IK +   I IDK  + A+E L  I EV
Sbjct: 1175 YYNRSLKLDQKNAESY-YRTGILLFKQNMFENSIKSLNNCIKIDKYHLGAHEQLIQIYEV 1233

Query: 326  QRGR 329
            Q+ +
Sbjct: 1234 QQNK 1237


>gi|333988324|ref|YP_004520931.1| hypothetical protein MSWAN_2122 [Methanobacterium sp. SWAN-1]
 gi|333826468|gb|AEG19130.1| Tetratricopeptide TPR_1 repeat-containing protein [Methanobacterium
           sp. SWAN-1]
          Length = 584

 Score = 66.6 bits (161), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 82/393 (20%), Positives = 171/393 (43%), Gaps = 49/393 (12%)

Query: 147 LHAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHV 206
           L++   + +A    DEA K+D    D++  +G       +Y  A+   ++ +    N+  
Sbjct: 161 LNSLERYVEALKCFDEALKLDAEDVDTWIGKGYALQSLKKYNLAMACFNRALDFKSNYLK 220

Query: 207 ARAQRHFVVHKMIVPGDRERVEQSLKEFRNFVDTHSNVVE--ACTLFAQVLVDQEDFDGA 264
           A   + F++             + LKE    V+    V+E    + FA  L     FD  
Sbjct: 221 AYYNKGFLL-------------RELKEHEKAVECFDKVIEIEPKSGFAWYLKGL-SFDML 266

Query: 265 EEY------FNRSIRVDPENASLYVHRAMLMLQARGNVDEAIKLIEKAISIDKSCMFAYE 318
           ++Y      ++ +I++DP++    V ++   L+     ++A+KL++K I +D     AY 
Sbjct: 267 KKYHDALNAYDEAIKIDPKDPEFLVVKSW-TLKHLKEYEDALKLLDKTIELDSGYYHAYV 325

Query: 319 TLGTIEVQRGRLEEAVKCFNKALPLARDEAELSHIYSLRDAAIAQM----KVCERYNIKK 374
             G I  +  + E++++CFNKA+ L  D+   S IY  +   + ++    +    +N   
Sbjct: 326 DKGLIFSELKKYEKSIECFNKAIELKEDD---SIIYRSKGDVLDKLGNYHEALNCFNKTL 382

Query: 375 KVSPRSQNITKNEKLAIKQLRENND--IIIRPA----------DKGGKTVVMDKADYTQK 422
           ++ P +     ++ L ++++ + ++     + A          D   K  + +KA   ++
Sbjct: 383 ELEPENGLNWHSKALTLEKMWKMDESKFYFKRAIECYDAKLTKDPENKYTLANKASALEE 442

Query: 423 MTSILNSNDYEIIPGDPTKTIEESEKYGNLENESGQ-KHAASDFTKAFADLDEAEKVDPN 481
           +     + +Y        K +E    Y    N  G+       + +A   +DEA +++  
Sbjct: 443 LGKYAEALEY------VDKALEIDADYDWALNLKGEILLKMKQYHEALKYIDEAIQLETE 496

Query: 482 VADSYYQRGQIYCLFGQYEEALRNLDKTIALNP 514
             + YY +G++ C   QY  AL+  +K+I L+P
Sbjct: 497 DEEYYYNKGKVLCALKQYGGALKLFNKSIKLDP 529



 Score = 60.1 bits (144), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 86/379 (22%), Positives = 162/379 (42%), Gaps = 31/379 (8%)

Query: 167 DPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQRHFVVHKMIVPGDRER 226
           DP    ++  +  +Y    +YE+AL+ LDK     P    A   + +    +    D++ 
Sbjct: 38  DPKNYRAWKGKSDVYQKMERYEDALKCLDKLTDFYPENGRAWHSKAYTYQLLGNDEDKDV 97

Query: 227 VEQSLKEF--RNFVDTHSNVVEACTLFAQVLVDQEDFDGAEEYFNRSIRVDPENASLYVH 284
             +   +F  R+ V    N VE     A +L   E ++ + E+F++SI+ DP+ A  + +
Sbjct: 98  CYKKALKFYGRDLVKNPHNSVELYNK-ALILYIFEKYEESLEFFDKSIKEDPKYAHSWQY 156

Query: 285 RAMLMLQARGNVDEAIKLIEKAISIDKSCMFAYETLGTIEVQRGRLEEAVKCFNKALPLA 344
           +    L +     EA+K  ++A+ +D   +  +   G       +   A+ CFN+AL   
Sbjct: 157 KG-FALNSLERYVEALKCFDEALKLDAEDVDTWIGKGYALQSLKKYNLAMACFNRALDFK 215

Query: 345 RD--EAELSHIYSLRDAAIAQMKVCERYNIKKKVSPRSQNITKNEKLAIKQLRENNDIII 402
            +  +A  +  + LR+      K  E ++   ++ P+S      + L+   L++ +D  +
Sbjct: 216 SNYLKAYYNKGFLLRELK-EHEKAVECFDKVIEIEPKSGFAWYLKGLSFDMLKKYHD-AL 273

Query: 403 RPADKGGKTVVMDKADYTQKMTSILNSNDYEIIPGDPTKTIEESEKYGNLENESGQKHAA 462
              D+  K    D      K  ++ +  +YE    D  K ++++     +E +SG  HA 
Sbjct: 274 NAYDEAIKIDPKDPEFLVVKSWTLKHLKEYE----DALKLLDKT-----IELDSGYYHAY 324

Query: 463 SDFTKAFADLDEAEK--------VDPNVADS--YYQRGQIYCLFGQYEEALRNLDKTIAL 512
            D    F++L + EK        ++    DS  Y  +G +    G Y EAL   +KT+ L
Sbjct: 325 VDKGLIFSELKKYEKSIECFNKAIELKEDDSIIYRSKGDVLDKLGNYHEALNCFNKTLEL 384

Query: 513 NP----NFHVARAQRHFVW 527
            P    N+H        +W
Sbjct: 385 EPENGLNWHSKALTLEKMW 403



 Score = 52.0 bits (123), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 52/269 (19%), Positives = 113/269 (42%), Gaps = 37/269 (13%)

Query: 110 FTSQSTKAIEDLTQLVEDTSVDPKIKVNAHIKRAVVHLHAASDFTKAFADLDEAEKVDPN 169
           +T +  K  ED  +L++ T        +A++ + ++       + K+    ++A ++  +
Sbjct: 295 WTLKHLKEYEDALKLLDKTIELDSGYYHAYVDKGLI-FSELKKYEKSIECFNKAIELKED 353

Query: 170 VADSYYQRGQIYCLFGQYEEALRNLDKTIALNP----------------------NFHVA 207
            +  Y  +G +    G Y EAL   +KT+ L P                       F+  
Sbjct: 354 DSIIYRSKGDVLDKLGNYHEALNCFNKTLELEPENGLNWHSKALTLEKMWKMDESKFYFK 413

Query: 208 RA-------------QRHFVVHKMIVPGDRERVEQSLKEFRNFVDTHSNVVEACTLFAQV 254
           RA              ++ + +K     +  +  ++L+     ++  ++   A  L  ++
Sbjct: 414 RAIECYDAKLTKDPENKYTLANKASALEELGKYAEALEYVDKALEIDADYDWALNLKGEI 473

Query: 255 LVDQEDFDGAEEYFNRSIRVDPENASLYVHRAMLMLQARGNVDEAIKLIEKAISIDKSCM 314
           L+  + +  A +Y + +I+++ E+   Y ++   +L A      A+KL  K+I +D  C 
Sbjct: 474 LLKMKQYHEALKYIDEAIQLETEDEEYYYNKGK-VLCALKQYGGALKLFNKSIKLDPKCY 532

Query: 315 FAYETLGTIEVQRGRLEEAVKCFNKALPL 343
            +    G +  + G  EEA+KC+ KAL +
Sbjct: 533 RSLYAKGVVMEKMGNPEEALKCYKKALQI 561



 Score = 45.8 bits (107), Expect = 0.061,   Method: Compositional matrix adjust.
 Identities = 34/128 (26%), Positives = 67/128 (52%), Gaps = 9/128 (7%)

Query: 184 FGQYEEALRNLDKTIALNPNFHVARAQRHFVVHKMIVPGDRERVEQSLKEFRNFVDTHSN 243
            G+Y EAL  +DK + ++ ++  A   +  ++ KM      ++  ++LK     +   + 
Sbjct: 443 LGKYAEALEYVDKALEIDADYDWALNLKGEILLKM------KQYHEALKYIDEAIQLETE 496

Query: 244 VVEACTLFAQVLVDQEDFDGAEEYFNRSIRVDPE-NASLYVHRAMLMLQARGNVDEAIKL 302
             E      +VL   + + GA + FN+SI++DP+   SLY     ++++  GN +EA+K 
Sbjct: 497 DEEYYYNKGKVLCALKQYGGALKLFNKSIKLDPKCYRSLYAKG--VVMEKMGNPEEALKC 554

Query: 303 IEKAISID 310
            +KA+ I+
Sbjct: 555 YKKALQIN 562


>gi|218530199|ref|YP_002421015.1| hypothetical protein Mchl_2240 [Methylobacterium extorquens CM4]
 gi|240138554|ref|YP_002963026.1| hypothetical protein MexAM1_META1p1938 [Methylobacterium extorquens
           AM1]
 gi|418061679|ref|ZP_12699523.1| Tetratricopeptide TPR_1 repeat-containing protein [Methylobacterium
           extorquens DSM 13060]
 gi|218522502|gb|ACK83087.1| Tetratricopeptide TPR_2 repeat protein [Methylobacterium extorquens
           CM4]
 gi|240008523|gb|ACS39749.1| conserved hypothetical protein; putative exported protein
           [Methylobacterium extorquens AM1]
 gi|373564765|gb|EHP90850.1| Tetratricopeptide TPR_1 repeat-containing protein [Methylobacterium
           extorquens DSM 13060]
          Length = 286

 Score = 66.6 bits (161), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 54/197 (27%), Positives = 87/197 (44%), Gaps = 8/197 (4%)

Query: 157 FADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQRHFVVH 216
            A L +    +P+ A +Y  RG  Y   GQ+ EA+ +  K I L+PN   A   R     
Sbjct: 54  IASLSDVISRNPSDAGAYNTRGAAYARAGQFGEAITDFSKAIQLDPNSASAYNNRALAYR 113

Query: 217 KMIVPGDRERVEQSLKEFRNFVDTHSNVVEACTLFAQVLVDQEDFDGAEEYFNRSIRVDP 276
           +        R + ++++F   +    N   A    A +   Q D DGA    N +IR+ P
Sbjct: 114 QT------GRADAAMQDFSKAIANDPNFSAAYIGRANLERAQGDLDGALNDLNVAIRLAP 167

Query: 277 ENASLYVHRAMLMLQARGNVDEAIKLIEKAISIDKSCMFAYETLGTIEVQRGRLEEAVKC 336
           E+A  Y H   L+ Q + +  EAI     AI  +      Y   G   +  G+ ++A++ 
Sbjct: 168 ESAEAY-HARGLVRQKQNHNPEAIGDFAAAIDRNPFVAAPYAARGQSLISLGQYDKAIED 226

Query: 337 FNKALPL-ARDEAELSH 352
           FN AL + A+D    ++
Sbjct: 227 FNAALNVNAKDAGSWAY 243



 Score = 43.1 bits (100), Expect = 0.36,   Method: Compositional matrix adjust.
 Identities = 24/67 (35%), Positives = 36/67 (53%), Gaps = 1/67 (1%)

Query: 454 NESGQKHA-ASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIAL 512
           N  G  +A A  F +A  D  +A ++DPN A +Y  R   Y   G+ + A+++  K IA 
Sbjct: 72  NTRGAAYARAGQFGEAITDFSKAIQLDPNSASAYNNRALAYRQTGRADAAMQDFSKAIAN 131

Query: 513 NPNFHVA 519
           +PNF  A
Sbjct: 132 DPNFSAA 138


>gi|427722230|ref|YP_007069507.1| hypothetical protein Lepto7376_0229 [Leptolyngbya sp. PCC 7376]
 gi|427353950|gb|AFY36673.1| Tetratricopeptide TPR_1 repeat-containing protein [Leptolyngbya sp.
           PCC 7376]
          Length = 371

 Score = 66.6 bits (161), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 55/234 (23%), Positives = 103/234 (44%), Gaps = 14/234 (5%)

Query: 173 SYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQRHFVVHKMIVPGDRERVEQSLK 232
           +++++G  Y   G+YE+ + + DK +A+NP FH A   R   +      G   R E  + 
Sbjct: 73  AWFEQGLEYGAQGRYEDEIASYDKALAINPEFHDAWFYRGLAL------GFLNRYEDEVI 126

Query: 233 EFRNFVDTHSNVVEACTLFAQVLVDQEDFDGAEEYFNRSIRVDPENASLYVHRAMLMLQA 292
            +   +    N  +     A  L +    D A   +  +   +PE+A  + +R +L L  
Sbjct: 127 SYDRAITLQPNNGDTWFNRAVALENLGQIDAAITSYEAAGEANPEDAEAWYNRGIL-LGG 185

Query: 293 RGNVDEAIKLIEKAISIDKSCMFAYETLGTIEVQRGRLEEAVKCFNKALPLARDEAELSH 352
            G  +E I   +K++SID +    +   G      GRLEE ++ ++KAL     + E   
Sbjct: 186 LGRFEEEIASYDKSLSIDPTSTDTWYNRGVSLGDLGRLEEEIESYDKAL---EQDPENQD 242

Query: 353 IYSLRDAAIAQM----KVCERYNIKKKVSPRSQNITKNEKLAIKQLRENNDIII 402
            +  R  A   +    K  E Y+I   ++P   +   N  +++  L + ++ I+
Sbjct: 243 AWYNRGVAFGLLGEFEKEIESYDILLALNPEDADTWYNRGISLSDLGQESEAIV 296



 Score = 48.9 bits (115), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 40/199 (20%), Positives = 88/199 (44%), Gaps = 7/199 (3%)

Query: 145 VHLHAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNF 204
           V L        A    + A + +P  A+++Y RG +    G++EE + + DK+++++P  
Sbjct: 147 VALENLGQIDAAITSYEAAGEANPEDAEAWYNRGILLGGLGRFEEEIASYDKSLSIDPT- 205

Query: 205 HVARAQRHFVVHKMIVPGDRERVEQSLKEFRNFVDTHSNVVEACTLFAQVLVDQEDFDGA 264
                      ++ +  GD  R+E+ ++ +   ++      +A            +F+  
Sbjct: 206 -----STDTWYNRGVSLGDLGRLEEEIESYDKALEQDPENQDAWYNRGVAFGLLGEFEKE 260

Query: 265 EEYFNRSIRVDPENASLYVHRAMLMLQARGNVDEAIKLIEKAISIDKSCMFAYETLGTIE 324
            E ++  + ++PE+A  + +R  + L   G   EAI    +AI +D      +  +   +
Sbjct: 261 IESYDILLALNPEDADTWYNRG-ISLSDLGQESEAIVSYREAIRLDPQRDIVFYNIAVSQ 319

Query: 325 VQRGRLEEAVKCFNKALPL 343
           V+ G ++ A+    KA+ L
Sbjct: 320 VRLGEIDAALDSLEKAIEL 338



 Score = 38.5 bits (88), Expect = 8.4,   Method: Compositional matrix adjust.
 Identities = 22/74 (29%), Positives = 36/74 (48%), Gaps = 2/74 (2%)

Query: 129 SVDPKIKVNAHIKRAVVHLHAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYE 188
           S+DP    +    R V  L       +     D+A + DP   D++Y RG  + L G++E
Sbjct: 201 SIDPT-STDTWYNRGV-SLGDLGRLEEEIESYDKALEQDPENQDAWYNRGVAFGLLGEFE 258

Query: 189 EALRNLDKTIALNP 202
           + + + D  +ALNP
Sbjct: 259 KEIESYDILLALNP 272


>gi|113475260|ref|YP_721321.1| hypothetical protein Tery_1568 [Trichodesmium erythraeum IMS101]
 gi|110166308|gb|ABG50848.1| protein of unknown function DUF323 [Trichodesmium erythraeum
           IMS101]
          Length = 820

 Score = 66.6 bits (161), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 46/192 (23%), Positives = 90/192 (46%), Gaps = 7/192 (3%)

Query: 156 AFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQRHFVV 215
           A A+ ++A K++P  A++YY RG +Y   G+Y+ AL + ++ I  NP +      +  + 
Sbjct: 336 AIAEFNQAIKLNPKYAEAYYNRGNVYNTQGKYDLALVDYNQAIKFNPKYTQVYNNKGIIY 395

Query: 216 HKMIVPGDRERVEQSLKEFRNFVDTHSNVVEACTLFAQVLVDQEDFDGAEEYFNRSIRVD 275
           +K      + + + +L EF   +  +    +       V  +Q  +D A   FN++I+++
Sbjct: 396 NK------QGKYDLALAEFNQAIKLNPKYSKVYNNRGIVYNNQRKYDLAIAEFNQAIKLN 449

Query: 276 PENASLYVHRAMLMLQARGNVDEAIKLIEKAISIDKSCMFAYETLGTIEVQRGRLEEAVK 335
           P+ A  Y +R  +    +G  D A+    +AI        AY   G +   +  +E  + 
Sbjct: 450 PKYAEAYYNRGNIY-NNQGKYDLALAEFNQAIKFKPKYAKAYYNRGLVYKTQRNIERVIS 508

Query: 336 CFNKALPLARDE 347
            F KA  L +++
Sbjct: 509 DFEKAAKLYKEQ 520



 Score = 45.8 bits (107), Expect = 0.056,   Method: Compositional matrix adjust.
 Identities = 39/171 (22%), Positives = 80/171 (46%), Gaps = 7/171 (4%)

Query: 171 ADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQRHFVVHKMIVPGDRERVEQS 230
           A+SY+ +G  Y    +Y+ A+   ++ I LNP +  A   R  V +       + + + +
Sbjct: 317 AESYFNQGLKYRNQRKYDLAIAEFNQAIKLNPKYAEAYYNRGNVYNT------QGKYDLA 370

Query: 231 LKEFRNFVDTHSNVVEACTLFAQVLVDQEDFDGAEEYFNRSIRVDPENASLYVHRAMLML 290
           L ++   +  +    +       +   Q  +D A   FN++I+++P+ + +Y +R ++  
Sbjct: 371 LVDYNQAIKFNPKYTQVYNNKGIIYNKQGKYDLALAEFNQAIKLNPKYSKVYNNRGIVYN 430

Query: 291 QARGNVDEAIKLIEKAISIDKSCMFAYETLGTIEVQRGRLEEAVKCFNKAL 341
             R   D AI    +AI ++     AY   G I   +G+ + A+  FN+A+
Sbjct: 431 NQR-KYDLAIAEFNQAIKLNPKYAEAYYNRGNIYNNQGKYDLALAEFNQAI 480



 Score = 45.1 bits (105), Expect = 0.10,   Method: Compositional matrix adjust.
 Identities = 27/99 (27%), Positives = 50/99 (50%), Gaps = 1/99 (1%)

Query: 432 YEIIPGDPTKTIEESEKYGNLENESGQKHAAS-DFTKAFADLDEAEKVDPNVADSYYQRG 490
           Y++   +  + I+ + KY  + N  G  +     +  A A+ ++A K++P  A++YY RG
Sbjct: 401 YDLALAEFNQAIKLNPKYSKVYNNRGIVYNNQRKYDLAIAEFNQAIKLNPKYAEAYYNRG 460

Query: 491 QIYCLFGQYEEALRNLDKTIALNPNFHVARAQRHFVWTS 529
            IY   G+Y+ AL   ++ I   P +  A   R  V+ +
Sbjct: 461 NIYNNQGKYDLALAEFNQAIKFKPKYAKAYYNRGLVYKT 499



 Score = 43.5 bits (101), Expect = 0.30,   Method: Compositional matrix adjust.
 Identities = 18/49 (36%), Positives = 32/49 (65%)

Query: 468 AFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNF 516
           A A+ ++A K++P  A++YY RG +Y   G+Y+ AL + ++ I  NP +
Sbjct: 336 AIAEFNQAIKLNPKYAEAYYNRGNVYNTQGKYDLALVDYNQAIKFNPKY 384



 Score = 39.7 bits (91), Expect = 4.7,   Method: Compositional matrix adjust.
 Identities = 30/127 (23%), Positives = 54/127 (42%), Gaps = 13/127 (10%)

Query: 410 KTVVMDKADYTQKMTSILNSNDYEIIPGDPTKTIEESEKY-------GNLENESGQKHAA 462
           K ++ +   Y  +     N   Y++   +  + I+ + KY       GN+ N  G+    
Sbjct: 311 KFLIQNAESYFNQGLKYRNQRKYDLAIAEFNQAIKLNPKYAEAYYNRGNVYNTQGK---- 366

Query: 463 SDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQ 522
             +  A  D ++A K +P     Y  +G IY   G+Y+ AL   ++ I LNP +      
Sbjct: 367 --YDLALVDYNQAIKFNPKYTQVYNNKGIIYNKQGKYDLALAEFNQAIKLNPKYSKVYNN 424

Query: 523 RHFVWTS 529
           R  V+ +
Sbjct: 425 RGIVYNN 431


>gi|334118605|ref|ZP_08492694.1| Tetratricopeptide TPR_2 repeat-containing protein [Microcoleus
           vaginatus FGP-2]
 gi|333459612|gb|EGK88225.1| Tetratricopeptide TPR_2 repeat-containing protein [Microcoleus
           vaginatus FGP-2]
          Length = 560

 Score = 66.6 bits (161), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 78/396 (19%), Positives = 162/396 (40%), Gaps = 59/396 (14%)

Query: 138 AHIKRAVVHLHAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKT 197
           A + R +  L  A  + +A    D A ++ P  + +++ RG       +Y EA+   D+ 
Sbjct: 201 AWLNRGLA-LMKAERYAEAVTSYDRAIQLQPQNSLAWFNRGIASAKLHKYAEAVTAYDRV 259

Query: 198 IALNPN-----FHVARAQRHFVVHKMIVPGDRERVEQSLKEFRNFVDTHSNVVEACTLFA 252
           + + PN     F+   A +H      I   DR             +  +S   EA     
Sbjct: 260 LQMQPNDCEAWFYKGMALKHQWADAAIACFDRA------------IKINSFYPEAWIGRG 307

Query: 253 QVLVDQEDFDGAEEYFNRSIRVDPENASLYVHRAMLMLQARGNVDEAIKLIEKAISIDKS 312
           Q L +  DF+GA   F+++++++P     ++ R  + L       EAI     A+ I+ +
Sbjct: 308 QTLSESRDFEGAIAAFDQAVQINPNFPEAWLGRG-IALAGLERYKEAIIAYSNALQIEGN 366

Query: 313 CMFAYETLGTIEVQRGRLEEAVKCFNKALPLARDEAELSHIYSL-RDAAIAQMKVCER-- 369
            + A+   G    +  + EEA+ CF+K + L   EAE++    L + AA+ +++  E   
Sbjct: 367 FLEAWNLRGEALEKLQQYEEAIACFDKVISLT-SEAEITSKVGLQQGAALEKLQRYEEAV 425

Query: 370 --YNIKKKVSPRSQNITKNEKLAIKQLRENNDIIIRPADKGGKTVVMDKADYTQKMTSIL 427
             YN   K+ P +         A+ +L++    +               A Y + +T   
Sbjct: 426 AAYNRVLKIVPDNFEAWLKRGNALSKLQQYEQAL---------------ASYDRAIT--- 467

Query: 428 NSNDYEIIPGDPTKTIEESEKYGNLENESGQKHAASDFTKAFADLDEAEKVDPNVADSYY 487
                 + P +    ++     G ++N          +++A    D+  ++ P+  +++ 
Sbjct: 468 ------VWPDNYQGWVQRGLILGEMQN----------YSQALVAFDQVIQLKPDNWEAWA 511

Query: 488 QRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQR 523
           QRG +     + ++A+ +    + + P+++ A   R
Sbjct: 512 QRGDVLQKLQRTQDAISSYGVALEIKPDYYEALVSR 547



 Score = 55.1 bits (131), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 90/464 (19%), Positives = 181/464 (39%), Gaps = 74/464 (15%)

Query: 146 HLHAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFH 205
            L+AA  +  A     +A ++ P+ A ++   G+ Y     Y E +   D+  A+NP  +
Sbjct: 38  RLYAAGRYEAAVICYGKAVQIKPDWARAWLNLGKAYKQLHSYAETVACADRATAINPEEY 97

Query: 206 VARAQRHFVVHKM------IVPGD---------------RERVEQSLKE-------FRNF 237
            A   R   +  +      I   D               R RV + L++       ++  
Sbjct: 98  WAWMLRGTGLLSLQNHSEAIAAFDTAIQINSEKHEAWYQRGRVLEELQQWEAAASCYKKA 157

Query: 238 VDTHSNVVEACTLFAQVLVDQEDFDGAEEYFNRSIRVDPENASLYVHRAMLMLQARGNVD 297
              H N+         VLV  E +  A   F R++++ P N   +++R + +++A     
Sbjct: 158 TQLHPNLPAMWYRQGNVLVQAERYPEAVAAFERALKLVPTNWEAWLNRGLALMKAE-RYA 216

Query: 298 EAIKLIEKAISIDKSCMFAYETLGTIEVQRGRLEEAVKCFNKALPLARDEAE-------- 349
           EA+   ++AI +      A+   G    +  +  EAV  +++ L +  ++ E        
Sbjct: 217 EAVTSYDRAIQLQPQNSLAWFNRGIASAKLHKYAEAVTAYDRVLQMQPNDCEAWFYKGMA 276

Query: 350 LSHIYSLRDAAIAQMKVCERYN--IKKKVSPRSQNITKNEKLAIKQLRENNDIIIRP--- 404
           L H ++  DAAIA      + N    +    R Q ++++          +  + I P   
Sbjct: 277 LKHQWA--DAAIACFDRAIKINSFYPEAWIGRGQTLSESRDFEGAIAAFDQAVQINPNFP 334

Query: 405 -ADKGGKTVVMDKADYTQKMTSILNSNDYEI-------IPGDPTKTIEESE-------KY 449
            A  G    +     Y + + +  N+   E        + G+  + +++ E       K 
Sbjct: 335 EAWLGRGIALAGLERYKEAIIAYSNALQIEGNFLEAWNLRGEALEKLQQYEEAIACFDKV 394

Query: 450 GNLENES------GQKHAAS-----DFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQ 498
            +L +E+      G +  A+      + +A A  +   K+ P+  +++ +RG       Q
Sbjct: 395 ISLTSEAEITSKVGLQQGAALEKLQRYEEAVAAYNRVLKIVPDNFEAWLKRGNALSKLQQ 454

Query: 499 YEEALRNLDKTIALNPNFHVARAQRHFVWTSTLAELMAFSDEFM 542
           YE+AL + D+ I + P+ +    QR  +    L E+  +S   +
Sbjct: 455 YEQALASYDRAITVWPDNYQGWVQRGLI----LGEMQNYSQALV 494



 Score = 50.4 bits (119), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 52/257 (20%), Positives = 104/257 (40%), Gaps = 48/257 (18%)

Query: 131 DPKIKVNAHIKRAVVH----LHAASDFTKAFADLDEAEKVDPNVADSYYQRG-------- 178
           D  IK+N+    A +     L  + DF  A A  D+A +++PN  +++  RG        
Sbjct: 290 DRAIKINSFYPEAWIGRGQTLSESRDFEGAIAAFDQAVQINPNFPEAWLGRGIALAGLER 349

Query: 179 -------------------QIYCLFG-------QYEEALRNLDKTIALNPNFHVARA--- 209
                              + + L G       QYEEA+   DK I+L     +      
Sbjct: 350 YKEAIIAYSNALQIEGNFLEAWNLRGEALEKLQQYEEAIACFDKVISLTSEAEITSKVGL 409

Query: 210 QRHFVVHKMIVPGDRERVEQSLKEFRNFVDTHSNVVEACTLFAQVLVDQEDFDGAEEYFN 269
           Q+   + K+      +R E+++  +   +    +  EA       L   + ++ A   ++
Sbjct: 410 QQGAALEKL------QRYEEAVAAYNRVLKIVPDNFEAWLKRGNALSKLQQYEQALASYD 463

Query: 270 RSIRVDPENASLYVHRAMLMLQARGNVDEAIKLIEKAISIDKSCMFAYETLGTIEVQRGR 329
           R+I V P+N   +V R +++ + + N  +A+   ++ I +      A+   G +  +  R
Sbjct: 464 RAITVWPDNYQGWVQRGLILGEMQ-NYSQALVAFDQVIQLKPDNWEAWAQRGDVLQKLQR 522

Query: 330 LEEAVKCFNKALPLARD 346
            ++A+  +  AL +  D
Sbjct: 523 TQDAISSYGVALEIKPD 539



 Score = 39.3 bits (90), Expect = 4.9,   Method: Compositional matrix adjust.
 Identities = 30/140 (21%), Positives = 59/140 (42%), Gaps = 6/140 (4%)

Query: 153 FTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQRH 212
           + +A A  +   K+ P+  +++ +RG       QYE+AL + D+ I + P+ +    QR 
Sbjct: 421 YEEAVAAYNRVLKIVPDNFEAWLKRGNALSKLQQYEQALASYDRAITVWPDNYQGWVQRG 480

Query: 213 FVVHKMIVPGDRERVEQSLKEFRNFVDTHSNVVEACTLFAQVLVDQEDFDGAEEYFNRSI 272
            ++      G+ +   Q+L  F   +    +  EA      VL   +    A   +  ++
Sbjct: 481 LIL------GEMQNYSQALVAFDQVIQLKPDNWEAWAQRGDVLQKLQRTQDAISSYGVAL 534

Query: 273 RVDPENASLYVHRAMLMLQA 292
            + P+     V R  L L+ 
Sbjct: 535 EIKPDYYEALVSREELRLKG 554


>gi|384210297|ref|YP_005596017.1| hypothetical protein Bint_2843 [Brachyspira intermedia PWS/A]
 gi|343387947|gb|AEM23437.1| TPR domain-containing protein [Brachyspira intermedia PWS/A]
          Length = 233

 Score = 66.6 bits (161), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 51/194 (26%), Positives = 93/194 (47%), Gaps = 13/194 (6%)

Query: 153 FTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQRH 212
           + +A    ++A ++DPN + +YY RG +    G+YEEA+++ D  I L+ N+  A   R 
Sbjct: 29  YEEAIVYYNKAIELDPNYSAAYYNRGSVKADLGEYEEAIKDYDMAIELDHNYTYAYNNRG 88

Query: 213 FVVHKMIVPGDRERVEQSLKEFRNFVDTHSNVVEACT---LFAQVLVDQEDFDGAEEYFN 269
                +         E+++K++   ++  S+  +A     +   VL   ED   + + FN
Sbjct: 89  LAKDYL------GEYEEAIKDYDKAIELDSDYSDAYNNRGIVKNVLGKYED---SIKDFN 139

Query: 270 RSIRVDPENASLYVHRAMLMLQARGNVDEAIKLIEKAISIDKSCMFAYETLGTIEVQRGR 329
           + I ++P ++  Y +R  +     G   EAIK  +KAI ++ +    Y   G  +     
Sbjct: 140 KVIELNPNDSDAYYNRGTVK-DVLGKYGEAIKDYDKAIELNPNNGAFYNNRGVSKENLEE 198

Query: 330 LEEAVKCFNKALPL 343
             EA+K + KAL L
Sbjct: 199 YNEALKDYKKALEL 212



 Score = 61.6 bits (148), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 43/170 (25%), Positives = 84/170 (49%), Gaps = 7/170 (4%)

Query: 174 YYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQRHFVVHKMIVPGDRERVEQSLKE 233
           Y+    I+CL G+YEEA+   +K I L+PN+  A   R        V  D    E+++K+
Sbjct: 16  YFDNANIFCLEGKYEEAIVYYNKAIELDPNYSAAYYNRG------SVKADLGEYEEAIKD 69

Query: 234 FRNFVDTHSNVVEACTLFAQVLVDQEDFDGAEEYFNRSIRVDPENASLYVHRAMLMLQAR 293
           +   ++   N   A            +++ A + ++++I +D + +  Y +R ++     
Sbjct: 70  YDMAIELDHNYTYAYNNRGLAKDYLGEYEEAIKDYDKAIELDSDYSDAYNNRGIVK-NVL 128

Query: 294 GNVDEAIKLIEKAISIDKSCMFAYETLGTIEVQRGRLEEAVKCFNKALPL 343
           G  +++IK   K I ++ +   AY   GT++   G+  EA+K ++KA+ L
Sbjct: 129 GKYEDSIKDFNKVIELNPNDSDAYYNRGTVKDVLGKYGEAIKDYDKAIEL 178



 Score = 57.8 bits (138), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 56/227 (24%), Positives = 108/227 (47%), Gaps = 18/227 (7%)

Query: 105 ATVYIFTSQSTKAIEDLTQLVEDTSVDPKIKVNAHIKRAVVHLHAASDFTKAFADLDEAE 164
           A ++    +  +AI    + +E   +DP     A+  R  V      ++ +A  D D A 
Sbjct: 20  ANIFCLEGKYEEAIVYYNKAIE---LDPNYSA-AYYNRGSVKADLG-EYEEAIKDYDMAI 74

Query: 165 KVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQRHFVVHKMIVPGDR 224
           ++D N   +Y  RG      G+YEEA+++ DK I L+ ++  A   R  V +   V G  
Sbjct: 75  ELDHNYTYAYNNRGLAKDYLGEYEEAIKDYDKAIELDSDYSDAYNNRGIVKN---VLG-- 129

Query: 225 ERVEQSLKEFRNFVDTHSNVVEACTLFAQVLVDQEDFDGAEEYFNRSIRVDPENASLYVH 284
            + E S+K+F   ++ + N  +A      V      +  A + ++++I ++P N + Y +
Sbjct: 130 -KYEDSIKDFNKVIELNPNDSDAYYNRGTVKDVLGKYGEAIKDYDKAIELNPNNGAFYNN 188

Query: 285 RAMLMLQARGNV---DEAIKLIEKAISIDKSCMFAYETLGTIEVQRG 328
           R +    ++ N+   +EA+K  +KA+ +D +   A E +  I+ + G
Sbjct: 189 RGV----SKENLEEYNEALKDYKKALELDPNYDIARENIKEIQDKYG 231



 Score = 52.0 bits (123), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 34/142 (23%), Positives = 70/142 (49%), Gaps = 11/142 (7%)

Query: 94  NHTKALARLLRATVYIFTSQSTKAIEDLTQLVEDTSVDPKIKVNAHIKRAVVHLHAASDF 153
           +H    A   R     +  +  +AI+D  + +E   +D     +A+  R +V  +    +
Sbjct: 77  DHNYTYAYNNRGLAKDYLGEYEEAIKDYDKAIE---LDSDYS-DAYNNRGIVK-NVLGKY 131

Query: 154 TKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQRHF 213
             +  D ++  +++PN +D+YY RG +  + G+Y EA+++ DK I LNPN         F
Sbjct: 132 EDSIKDFNKVIELNPNDSDAYYNRGTVKDVLGKYGEAIKDYDKAIELNPN------NGAF 185

Query: 214 VVHKMIVPGDRERVEQSLKEFR 235
             ++ +   + E   ++LK+++
Sbjct: 186 YNNRGVSKENLEEYNEALKDYK 207



 Score = 51.2 bits (121), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 29/85 (34%), Positives = 46/85 (54%), Gaps = 1/85 (1%)

Query: 432 YEIIPGDPTKTIEESEKYGNLENESG-QKHAASDFTKAFADLDEAEKVDPNVADSYYQRG 490
           YE    D  K IE    Y +  N  G  K+    +  +  D ++  +++PN +D+YY RG
Sbjct: 97  YEEAIKDYDKAIELDSDYSDAYNNRGIVKNVLGKYEDSIKDFNKVIELNPNDSDAYYNRG 156

Query: 491 QIYCLFGQYEEALRNLDKTIALNPN 515
            +  + G+Y EA+++ DK I LNPN
Sbjct: 157 TVKDVLGKYGEAIKDYDKAIELNPN 181



 Score = 47.4 bits (111), Expect = 0.023,   Method: Compositional matrix adjust.
 Identities = 52/227 (22%), Positives = 95/227 (41%), Gaps = 33/227 (14%)

Query: 294 GNVDEAIKLIEKAISIDKSCMFAYETLGTIEVQRGRLEEAVKCFNKALPLARDEAELSHI 353
           G  +EAI    KAI +D +   AY   G+++   G  EEA+K ++ A+ L     + ++ 
Sbjct: 27  GKYEEAIVYYNKAIELDPNYSAAYYNRGSVKADLGEYEEAIKDYDMAIEL-----DHNYT 81

Query: 354 YSLRDAAIAQMKVCERYNIKKKVSPRSQNITKNEKLAIKQLRENNDIIIRPADKGGKTVV 413
           Y+  +  +A+  + E    ++ +    + I  +   +      NN  I+       K V+
Sbjct: 82  YAYNNRGLAKDYLGE---YEEAIKDYDKAIELDSDYSDAY---NNRGIV-------KNVL 128

Query: 414 MDKADYTQKMTSILNSNDYEIIPGDPTKTIEESEKYGNLENESGQKHAASDFTKAFADLD 473
               D  +    ++     E+ P D               N    K     + +A  D D
Sbjct: 129 GKYEDSIKDFNKVI-----ELNPNDSDAYY----------NRGTVKDVLGKYGEAIKDYD 173

Query: 474 EAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVAR 520
           +A +++PN    Y  RG       +Y EAL++  K + L+PN+ +AR
Sbjct: 174 KAIELNPNNGAFYNNRGVSKENLEEYNEALKDYKKALELDPNYDIAR 220



 Score = 44.7 bits (104), Expect = 0.12,   Method: Compositional matrix adjust.
 Identities = 22/68 (32%), Positives = 40/68 (58%)

Query: 459 KHAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHV 518
           K    ++ +A  D D+A ++D + +D+Y  RG +  + G+YE+++++ +K I LNPN   
Sbjct: 91  KDYLGEYEEAIKDYDKAIELDSDYSDAYNNRGIVKNVLGKYEDSIKDFNKVIELNPNDSD 150

Query: 519 ARAQRHFV 526
           A   R  V
Sbjct: 151 AYYNRGTV 158



 Score = 43.5 bits (101), Expect = 0.30,   Method: Compositional matrix adjust.
 Identities = 20/59 (33%), Positives = 35/59 (59%)

Query: 465 FTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQR 523
           + +A    ++A ++DPN + +YY RG +    G+YEEA+++ D  I L+ N+  A   R
Sbjct: 29  YEEAIVYYNKAIELDPNYSAAYYNRGSVKADLGEYEEAIKDYDMAIELDHNYTYAYNNR 87



 Score = 38.9 bits (89), Expect = 7.6,   Method: Compositional matrix adjust.
 Identities = 23/73 (31%), Positives = 36/73 (49%)

Query: 454 NESGQKHAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALN 513
           N    K    ++ +A  D D A ++D N   +Y  RG      G+YEEA+++ DK I L+
Sbjct: 52  NRGSVKADLGEYEEAIKDYDMAIELDHNYTYAYNNRGLAKDYLGEYEEAIKDYDKAIELD 111

Query: 514 PNFHVARAQRHFV 526
            ++  A   R  V
Sbjct: 112 SDYSDAYNNRGIV 124


>gi|429125145|ref|ZP_19185677.1| beta-lactamase domain-containing protein [Brachyspira hampsonii
           30446]
 gi|426278893|gb|EKV55921.1| beta-lactamase domain-containing protein [Brachyspira hampsonii
           30446]
          Length = 276

 Score = 66.6 bits (161), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 48/236 (20%), Positives = 107/236 (45%), Gaps = 12/236 (5%)

Query: 108 YIFTSQSTKAIEDLTQLVEDTSVDPKIKVNAHIKRAVVHLHAASDFTKAFADLDEAEKVD 167
           Y++     KAIE L + V   +++P  + N +      + +   D+ KA    ++A  ++
Sbjct: 3   YLYNKDYNKAIESLNKAV---NLNPNDEYNWYWLGGAYYNN--KDYNKAIESFNKAVNLN 57

Query: 168 PNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQRHFVVHKMIVPGDRERV 227
           PN    +Y  G+ Y     Y EA+ +L+K + LNPN        +++    +   D  + 
Sbjct: 58  PNEESYWYWLGRAYLENKYYNEAIESLNKAVNLNPN---DEYNWYWLGLSYLYNKDYNKA 114

Query: 228 EQSLKEFRNFVDTHSNVVEACTLFAQVLVDQEDFDGAEEYFNRSIRVDPENASLYVHRAM 287
            +S   F   V+ + N            +  ++++   E  N+++ ++P N S +     
Sbjct: 115 IES---FNKAVNLNPNKENYWYWLGMAYLYNQNYNKVVESLNKAVNLNPNNESYWYWLGN 171

Query: 288 LMLQARGNVDEAIKLIEKAISIDKSCMFAYETLGTIEVQRGRLEEAVKCFNKALPL 343
             L+ +   ++A++ + KAI+++ +    +  LG+  ++     +A++   KA+ L
Sbjct: 172 AYLENKE-YNKAVESLNKAINLNPNKESYWYELGSAYLENKEYNKAIESLKKAVEL 226



 Score = 40.4 bits (93), Expect = 2.3,   Method: Compositional matrix adjust.
 Identities = 19/60 (31%), Positives = 31/60 (51%)

Query: 456 SGQKHAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPN 515
            G  +   D+ KA    ++A  ++PN    +Y  G+ Y     Y EA+ +L+K + LNPN
Sbjct: 34  GGAYYNNKDYNKAIESFNKAVNLNPNEESYWYWLGRAYLENKYYNEAIESLNKAVNLNPN 93


>gi|409992587|ref|ZP_11275768.1| hypothetical protein APPUASWS_15917 [Arthrospira platensis str.
           Paraca]
 gi|291565893|dbj|BAI88165.1| TPR domain protein [Arthrospira platensis NIES-39]
 gi|409936542|gb|EKN78025.1| hypothetical protein APPUASWS_15917 [Arthrospira platensis str.
           Paraca]
          Length = 581

 Score = 66.6 bits (161), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 76/369 (20%), Positives = 144/369 (39%), Gaps = 51/369 (13%)

Query: 147 LHAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHV 206
           L     + KA    D A K+ P     +  RG       +YEEA+ + DK + + PN   
Sbjct: 94  LRKLKQYKKALGAYDRAIKLRPRNYWPWTFRGMTLSKLERYEEAIASFDKALTMEPNNFE 153

Query: 207 ARAQRHFVVHKMIVPGDRERVEQSLKEFRNFVDTHSNVVEACTLFAQVLVDQEDFDGAEE 266
           A  +R   +   +      + E +   ++  ++   N+          L++ + +  A  
Sbjct: 154 AWYERGLALEASL------QFEAAAASYKRAIEIKPNISALWYHQGSALMNDDRYSEAVA 207

Query: 267 YFNRSIRVDPENASLYVHRAMLMLQARGNVDEAIKLIEKAISIDKSCMFAYETLGTIEVQ 326
             +R+++++P N   + HR  ++ +    VD AI   +KA+ +  +   A    G    +
Sbjct: 208 SLDRAVKLEPANYEAWFHRGEMLTREHRYVD-AIASYDKALELQPASFKAIFNRGIALQK 266

Query: 327 RGRLEEAVKCFNKALPLARDEAELSHIYSLRDAAIAQMKVCERYNIKKKVSPRSQNITKN 386
             R  +A+ C+++ + L  ++ E    +  +  A+            K   P++  ++ +
Sbjct: 267 LHRYNDAIACYDQVIQLQPNDYE---AWFYKGMAL------------KSGWPKTALLSLD 311

Query: 387 EKLAIKQLRENNDIIIRPADKGGKTVVMDKADYTQKMTSI-----LNSNDYEIIPGDPTK 441
             L I    E+  I I     G    ++D  +Y   + S      LNSN  E   G    
Sbjct: 312 RALEINP--ESPAIWI-----GRGQTLLDLKEYKSAIASFDRATQLNSNFPEAWLGRAVA 364

Query: 442 TIEESEKYGNLENESGQKHAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEE 501
             +                    + +A    D A +V PN  +++ QRG      G+YE+
Sbjct: 365 LFQ-----------------LRRYPEAIIACDNALQVQPNFLEAWNQRGLTLERLGRYED 407

Query: 502 ALRNLDKTI 510
           AL+  DK I
Sbjct: 408 ALKAYDKVI 416



 Score = 39.3 bits (90), Expect = 5.7,   Method: Compositional matrix adjust.
 Identities = 75/398 (18%), Positives = 156/398 (39%), Gaps = 41/398 (10%)

Query: 145 VHLHAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNF 204
           + L A+  F  A A    A ++ PN++  +Y +G       +Y EA+ +LD+ + L P  
Sbjct: 160 LALEASLQFEAAAASYKRAIEIKPNISALWYHQGSALMNDDRYSEAVASLDRAVKLEPAN 219

Query: 205 HVARAQRHFVVHKMIVPGDRERVEQSLKEFRNFVDTHSNVVEACTLFAQVLVDQEDFDGA 264
           + A   R  ++ +        R   ++  +   ++      +A       L     ++ A
Sbjct: 220 YEAWFHRGEMLTR------EHRYVDAIASYDKALELQPASFKAIFNRGIALQKLHRYNDA 273

Query: 265 EEYFNRSIRVDPENASLYVHRAMLMLQARGNVDEAIKLIEKAISIDKSCMFAYETLGTIE 324
              +++ I++ P +   + ++ M +    G    A+  +++A+ I+      +   G   
Sbjct: 274 IACYDQVIQLQPNDYEAWFYKGMAL--KSGWPKTALLSLDRALEINPESPAIWIGRGQTL 331

Query: 325 VQRGRLEEAVKCFNKALPLARD--EAELSH---IYSLR---DAAIAQMKVCERYNIKKKV 376
           +     + A+  F++A  L  +  EA L     ++ LR   +A IA    C+      +V
Sbjct: 332 LDLKEYKSAIASFDRATQLNSNFPEAWLGRAVALFQLRRYPEAIIA----CDN---ALQV 384

Query: 377 SPRSQNITKNEKLAIKQLRENNDIIIRPADKGGKTVVM-----DKADYTQKMTSILNSND 431
            P          L +++L    D  ++  DK  +T V+     D+    + M   L   D
Sbjct: 385 QPNFLEAWNQRGLTLERLGRYED-ALKAYDKVIQTTVLTLELADQVGLQRGMALELLKRD 443

Query: 432 YEIIPG------DPTKTIEESEKYGNLENESGQKHAASDFTKAFADLDEAEKVDPNVADS 485
            E +              +   K G +    GQ      + +A     EA  + P+    
Sbjct: 444 EEAVMAYRKLVRQKPDNFQAWVKLGQVLARLGQ------YVQAVDAFSEAIAIWPDNYQI 497

Query: 486 YYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQR 523
           + ++G I     +Y++A+   D+ I + P++  A  +R
Sbjct: 498 WLEQGAILEKLDRYQDAIAAYDRLIKIKPDYWEAWVRR 535


>gi|73670356|ref|YP_306371.1| O-linked N-acetylglucosamine transferase [Methanosarcina barkeri
           str. Fusaro]
 gi|72397518|gb|AAZ71791.1| O-linked N-acetylglucosamine transferase [Methanosarcina barkeri
           str. Fusaro]
          Length = 397

 Score = 66.6 bits (161), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 53/207 (25%), Positives = 101/207 (48%), Gaps = 8/207 (3%)

Query: 137 NAHIKRAVVHLHAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDK 196
           NA   +A+ +L  A D+  A    ++  + + +  +++  +G      G+Y+EA+   DK
Sbjct: 153 NAWYGKAL-NLSQAGDYKAAIEAYEKVLEENSDYKEAWVGKGIALGQMGKYDEAIIAYDK 211

Query: 197 TIALNPNFHVARAQRHFVVHKMIVPGDRERVEQSLKEFRNFVDTHSNVVEACTLFAQVLV 256
            I L+PNF  A    H+    M   G      Q+LK ++  V+      +A       L 
Sbjct: 212 AIELDPNFAEA---WHYKGVDMDSLG---SYRQALKAYQKTVELDPENDDAWNNMGIDLE 265

Query: 257 DQEDFDGAEEYFNRSIRVDPENASLYVHRAMLMLQARGNVDEAIKLIEKAISIDKSCMFA 316
           + E +D A + F+++I ++ ENA ++ ++   + Q +   +EA +   KA  +D   + A
Sbjct: 266 NLEKYDEAIKAFDKAIEINSENADVWYNKGFTLSQMQ-RFEEAAETYRKATQLDPEYLEA 324

Query: 317 YETLGTIEVQRGRLEEAVKCFNKALPL 343
           Y +LG +  Q  R  E+++ + +AL L
Sbjct: 325 YSSLGFVLAQLRRFAESLEIYEQALKL 351



 Score = 54.3 bits (129), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 73/298 (24%), Positives = 127/298 (42%), Gaps = 32/298 (10%)

Query: 260 DFDGAEEYFNRSIRVDPENASLYVHRAMLMLQARGNVDEAIKLIEKAISIDKSCMFAYET 319
           +F+ A + F+++I +DP+N  L  ++A   L+  G  DEA+   EKAI I+      +  
Sbjct: 65  NFNEAMKAFDKAIEIDPDNIDLLNNKAQ-ALETVGKYDEALGFYEKAIKINAEDPDIWNN 123

Query: 320 LGTIEVQRGRLEEAVKCFNKALPLARDEAELSHIYSLRDAAIAQMKVC-ERYNIKKKVSP 378
           +     Q G+ +EAVK + KAL L  D     +  +L  +     K   E Y    + + 
Sbjct: 124 MAFSLSQVGKYDEAVKAYEKALELRPDYPNAWYGKALNLSQAGDYKAAIEAYEKVLEENS 183

Query: 379 RSQNITKNEKLAIKQLRENNDIIIRPADKG------------GKTVVMDK-ADYTQKMTS 425
             +     + +A+ Q+ + ++ II   DK              K V MD    Y Q + +
Sbjct: 184 DYKEAWVGKGIALGQMGKYDEAII-AYDKAIELDPNFAEAWHYKGVDMDSLGSYRQALKA 242

Query: 426 ILNSNDYEIIPGDPTKTIEESEKYGNLENESGQKHAASDFTKAFADLDEAEKVDPNVADS 485
              +     +  DP    E  + + N+  +        +  KAF   D+A +++   AD 
Sbjct: 243 YQKT-----VELDP----ENDDAWNNMGIDLENLEKYDEAIKAF---DKAIEINSENADV 290

Query: 486 YYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQRHFVWTSTLAELMAFSDEFMI 543
           +Y +G       ++EEA     K   L+P +  A +   FV    LA+L  F++   I
Sbjct: 291 WYNKGFTLSQMQRFEEAAETYRKATQLDPEYLEAYSSLGFV----LAQLRRFAESLEI 344



 Score = 48.1 bits (113), Expect = 0.012,   Method: Compositional matrix adjust.
 Identities = 43/215 (20%), Positives = 100/215 (46%), Gaps = 14/215 (6%)

Query: 185 GQYEEALRNLDKTIALNPNFHVARAQRHFVVHKMIVPGDRERVEQSLKEFRNFVDTHSNV 244
           G+Y+EA++  +K + L P++  A   +   + +    GD    + +++ +   ++ +S+ 
Sbjct: 132 GKYDEAVKAYEKALELRPDYPNAWYGKALNLSQ---AGD---YKAAIEAYEKVLEENSDY 185

Query: 245 VEACTLFAQVLVDQEDFDGAEEYFNRSIRVDPENASLYVHRAMLMLQARGNVDEAIKLIE 304
            EA       L     +D A   ++++I +DP  A  + ++ + M  + G+  +A+K  +
Sbjct: 186 KEAWVGKGIALGQMGKYDEAIIAYDKAIELDPNFAEAWHYKGVDM-DSLGSYRQALKAYQ 244

Query: 305 KAISIDKSCMFAYETLGTIEVQRGRLEEAVKCFNKALPLARDEAELSHIYSLRDAAIAQM 364
           K + +D     A+  +G       + +EA+K F+KA+ +  + A+   ++  +   ++QM
Sbjct: 245 KTVELDPENDDAWNNMGIDLENLEKYDEAIKAFDKAIEINSENAD---VWYNKGFTLSQM 301

Query: 365 K----VCERYNIKKKVSPRSQNITKNEKLAIKQLR 395
           +      E Y    ++ P       +    + QLR
Sbjct: 302 QRFEEAAETYRKATQLDPEYLEAYSSLGFVLAQLR 336



 Score = 45.4 bits (106), Expect = 0.082,   Method: Compositional matrix adjust.
 Identities = 44/208 (21%), Positives = 88/208 (42%), Gaps = 7/208 (3%)

Query: 136 VNAHIKRAVVHLHAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLD 195
           V A +    +   +  +F +A    D+A ++DP+  D    + Q     G+Y+EAL   +
Sbjct: 49  VAAKLNEYGLDFLSCGNFNEAMKAFDKAIEIDPDNIDLLNNKAQALETVGKYDEALGFYE 108

Query: 196 KTIALNPNFHVARAQRHFVVHKMIVPGDRERVEQSLKEFRNFVDTHSNVVEACTLFAQVL 255
           K I +N           F + ++       + ++++K +   ++   +   A    A  L
Sbjct: 109 KAIKINAEDPDIWNNMAFSLSQV------GKYDEAVKAYEKALELRPDYPNAWYGKALNL 162

Query: 256 VDQEDFDGAEEYFNRSIRVDPENASLYVHRAMLMLQARGNVDEAIKLIEKAISIDKSCMF 315
               D+  A E + + +  + +    +V + + + Q  G  DEAI   +KAI +D +   
Sbjct: 163 SQAGDYKAAIEAYEKVLEENSDYKEAWVGKGIALGQ-MGKYDEAIIAYDKAIELDPNFAE 221

Query: 316 AYETLGTIEVQRGRLEEAVKCFNKALPL 343
           A+   G      G   +A+K + K + L
Sbjct: 222 AWHYKGVDMDSLGSYRQALKAYQKTVEL 249



 Score = 41.6 bits (96), Expect = 1.1,   Method: Compositional matrix adjust.
 Identities = 74/365 (20%), Positives = 154/365 (42%), Gaps = 30/365 (8%)

Query: 164 EKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPN---FHVARAQRHFVVHKMIV 220
           E  D  VA    + G  +   G + EA++  DK I ++P+       +AQ    V K   
Sbjct: 43  EVSDKVVAAKLNEYGLDFLSCGNFNEAMKAFDKAIEIDPDNIDLLNNKAQALETVGKY-- 100

Query: 221 PGDRERVEQSLKEFRNFVDTHSNVVEACTLFAQVLVDQEDFDGAEEYFNRSIRVDPENAS 280
                  +++L  +   +  ++   +     A  L     +D A + + +++ + P+  +
Sbjct: 101 -------DEALGFYEKAIKINAEDPDIWNNMAFSLSQVGKYDEAVKAYEKALELRPDYPN 153

Query: 281 LYVHRAMLMLQARGNVDEAIKLIEKAISIDKSCMFAYETLGTIEVQRGRLEEAVKCFNKA 340
            +  +A+ + QA G+   AI+  EK +  +     A+   G    Q G+ +EA+  ++KA
Sbjct: 154 AWYGKALNLSQA-GDYKAAIEAYEKVLEENSDYKEAWVGKGIALGQMGKYDEAIIAYDKA 212

Query: 341 LPLARDEAELSHIYSL-RDAAIAQMKVCERYNIKKKVSPRSQNITKNEKLAIKQLRENND 399
           + L  + AE  H   +  D+  +  +  + Y    ++ P + +   N  + ++ L E  D
Sbjct: 213 IELDPNFAEAWHYKGVDMDSLGSYRQALKAYQKTVELDPENDDAWNNMGIDLENL-EKYD 271

Query: 400 IIIRPADKGGKTVVMDKADYTQKMTSILNSNDYEIIPGDPTKTIEESEKYGNLENESGQK 459
             I+  DK  +    +   +  K  ++     +E       +  E   K   L+ E  + 
Sbjct: 272 EAIKAFDKAIEINSENADVWYNKGFTLSQMQRFE-------EAAETYRKATQLDPEYLEA 324

Query: 460 HAASDFTKA----FAD----LDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIA 511
           +++  F  A    FA+     ++A K++P  ADS++ +       G+ EEA     K + 
Sbjct: 325 YSSLGFVLAQLRRFAESLEIYEQALKLNPEAADSWFGKAVCLSFLGREEEAEEAYRKAVE 384

Query: 512 LNPNF 516
           ++P +
Sbjct: 385 IDPRY 389


>gi|290988656|ref|XP_002677013.1| predicted protein [Naegleria gruberi]
 gi|284090618|gb|EFC44269.1| predicted protein [Naegleria gruberi]
          Length = 307

 Score = 66.6 bits (161), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 50/210 (23%), Positives = 93/210 (44%), Gaps = 16/210 (7%)

Query: 80  AIRHCTEEIESTSSNHTKALARLLRATVYIFTSQSTKAIEDLTQLVEDTSVDPKIKVNAH 139
           AI   T+ I   S+ +  +     R   Y   S ++KA++D ++ +E   +DP     A+
Sbjct: 34  AIEDFTKAISLLSAPNVLSKLHYNRGVTYSEMSDNSKAMDDFSRAIE---LDPSFHA-AY 89

Query: 140 IKRAVVHLHAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIA 199
             R +++     +   A  D  +A  +DPN +D YY RG  YC  G+YE A+ +  K I 
Sbjct: 90  NNRGLLYTRMEEE-ELAIKDFSKAIDLDPNFSDFYYNRGNSYCAIGEYENAMSDYTKCIE 148

Query: 200 LNPNF--HVARAQRHFVVHKMIVPGDRERVEQSLKEFRNFVDTHSNVVEACTLFAQVLVD 257
           L P+F  +  R   HF           + +++++ +F   ++  S+   +          
Sbjct: 149 LEPSFDCYYNRGNLHF---------GYQSIDKAIDDFTKSIELKSDFSMSWMHRGNAYCK 199

Query: 258 QEDFDGAEEYFNRSIRVDPENASLYVHRAM 287
             ++D A     R+I ++P     Y +R +
Sbjct: 200 ISNYDLAIVDLTRAIELNPNFPGGYFNRGI 229



 Score = 55.1 bits (131), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 26/64 (40%), Positives = 35/64 (54%), Gaps = 2/64 (3%)

Query: 468 AFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNF--HVARAQRHF 525
           A  D  +A  +DPN +D YY RG  YC  G+YE A+ +  K I L P+F  +  R   HF
Sbjct: 105 AIKDFSKAIDLDPNFSDFYYNRGNSYCAIGEYENAMSDYTKCIELEPSFDCYYNRGNLHF 164

Query: 526 VWTS 529
            + S
Sbjct: 165 GYQS 168



 Score = 48.5 bits (114), Expect = 0.010,   Method: Compositional matrix adjust.
 Identities = 51/222 (22%), Positives = 85/222 (38%), Gaps = 12/222 (5%)

Query: 320 LGTIEVQRGRLEE-------AVKCFNKALPLARDEAELSHIYSLRDAAIAQM----KVCE 368
           LG    QRG + +       A++ F KA+ L      LS ++  R    ++M    K  +
Sbjct: 14  LGDAYSQRGLIYQITRQGDLAIEDFTKAISLLSAPNVLSKLHYNRGVTYSEMSDNSKAMD 73

Query: 369 RYNIKKKVSPRSQNITKNEKLAIKQLRENNDIIIRPADKGGKTVVMDKADYTQKMTSILN 428
            ++   ++ P       N  L   ++ E  ++ I+   K           Y  +  S   
Sbjct: 74  DFSRAIELDPSFHAAYNNRGLLYTRMEEE-ELAIKDFSKAIDLDPNFSDFYYNRGNSYCA 132

Query: 429 SNDYEIIPGDPTKTIEESEKYGNLENESGQKHAASDFTKAFADLDEAEKVDPNVADSYYQ 488
             +YE    D TK IE    +    N            KA  D  ++ ++  + + S+  
Sbjct: 133 IGEYENAMSDYTKCIELEPSFDCYYNRGNLHFGYQSIDKAIDDFTKSIELKSDFSMSWMH 192

Query: 489 RGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQRHFVWTST 530
           RG  YC    Y+ A+ +L + I LNPNF      R   +T T
Sbjct: 193 RGNAYCKISNYDLAIVDLTRAIELNPNFPGGYFNRGIAFTLT 234



 Score = 42.4 bits (98), Expect = 0.64,   Method: Compositional matrix adjust.
 Identities = 77/358 (21%), Positives = 135/358 (37%), Gaps = 65/358 (18%)

Query: 159 DLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIAL--NPNFHVARAQRHFVVH 216
           D +   + +PN+ D+Y QRG IY +  Q + A+ +  K I+L   PN     ++ H+  +
Sbjct: 3   DFNRVIENEPNLGDAYSQRGLIYQITRQGDLAIEDFTKAISLLSAPN---VLSKLHY--N 57

Query: 217 KMIVPGDRERVEQSLKEFRNFVDTHSNVVEACTLFAQVLVDQEDFDGAEEYFNRSIRVDP 276
           + +   +     +++ +F   ++   +   A      +    E+ + A + F+++I +DP
Sbjct: 58  RGVTYSEMSDNSKAMDDFSRAIELDPSFHAAYNNRGLLYTRMEEEELAIKDFSKAIDLDP 117

Query: 277 ENASLYVHRAMLMLQARGNVDEAIKLIEKAISIDKSCMFAYETLGTIEVQRGRLEEAVKC 336
             +  Y +R      A G  + A+    K I ++ S    Y   G +      +++A+  
Sbjct: 118 NFSDFYYNRGNSYC-AIGEYENAMSDYTKCIELEPS-FDCYYNRGNLHFGYQSIDKAIDD 175

Query: 337 FNKALPLARDEAELSHIYSLRDAAIAQMKVCERYNIKKKVSPRSQNITKNEKLAIKQLRE 396
           F K++ L  D                 M    R N   K+S        N  LAI  L  
Sbjct: 176 FTKSIELKSD---------------FSMSWMHRGNAYCKIS--------NYDLAIVDLTR 212

Query: 397 NNDIIIRPADKGGKTVVMDKADYTQKMTSILNSNDYEIIPGDPTKTIEESEKYGNLENES 456
              I + P   GG         Y  +  +   + DY     D T+ IE     G      
Sbjct: 213 A--IELNPNFPGG---------YFNRGIAFTLTKDYSKALDDFTRVIEIVPTLG------ 255

Query: 457 GQKHAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNP 514
                              E + P  A +Y+ RG +Y    + E+A  +  K I LNP
Sbjct: 256 ----------------PHMEMLLPLHASAYHLRGNVYQNMQETEKAQLDFKKAIELNP 297


>gi|73671072|ref|YP_307087.1| TPR domain-containing protein [Methanosarcina barkeri str. Fusaro]
 gi|72398234|gb|AAZ72507.1| TPR-domain containing protein [Methanosarcina barkeri str. Fusaro]
          Length = 1979

 Score = 66.6 bits (161), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 49/204 (24%), Positives = 96/204 (47%), Gaps = 10/204 (4%)

Query: 143 AVVHLHAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNP 202
           A+V L    +  K+F+   E   +DP   D+ YQ+G++    G+YEEAL+  D  +  NP
Sbjct: 354 ALVKLQHFGEAAKSFSRTAE---LDPAYGDALYQQGRLLAREGKYEEALKAFDSMLEQNP 410

Query: 203 NFHVARAQRHFVVHKMIVPGDRERVEQSLKEFRNFVDTHSNVVEACTLFAQVLVDQEDFD 262
            F  A+  R  ++ K+       R+E++L      ++              +L+D   F+
Sbjct: 411 EFIKAQKLRGTMLIKL------GRIEEALDSLAQSLEKEPENYGLWLQQGLILLDNGKFE 464

Query: 263 GAEEYFNRSIRVDPENASLYVHRAMLMLQARGNVDEAIKLIEKAISIDKSCMFAYETLGT 322
            A +   +   + P+N + ++++    L +    +EA++  E+ + ++      +   G 
Sbjct: 465 PALKALEKVAELKPDNDACWMNKGY-ALYSMDRYEEALEDFEEGLRLNPYLEKGWNNKGI 523

Query: 323 IEVQRGRLEEAVKCFNKALPLARD 346
           +  + GR EEA++ F KA+ L  D
Sbjct: 524 VLGKLGRTEEALEAFEKAVSLRPD 547



 Score = 65.5 bits (158), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 81/420 (19%), Positives = 182/420 (43%), Gaps = 60/420 (14%)

Query: 151 SDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQ 210
            ++ +A    + A +++P  +D+ Y +G +     +Y EAL   D  I   P    A  Q
Sbjct: 155 GNYEEALECFEHALEINPKNSDACYSKGLVLANLEKYGEALECFDSLIREKPRHKDAWKQ 214

Query: 211 RHFVVHKMIVPGDRERVEQSLKEF-RNFVDTHSNVVEACTLFAQVLVDQEDFDGAEEYFN 269
           ++F + K+   G  E   + +  F R F  + + + +   L  ++      ++ AE+ F 
Sbjct: 215 KYFSLIKL---GKNEEALECVDAFLRKFPVSETALYQKGILLNEL----SRYEDAEKTFT 267

Query: 270 RSIRVDPENASLYVHRAMLMLQARGNVDEAIKLIEKAISIDKSCM--FAYETLGTIEVQR 327
           + ++++P N  +++ + + ++Q    +++AIK  E+AI +D +    + Y+ L  ++++ 
Sbjct: 268 KILKINPGNKEIWLKKGLALIQLL-RLNDAIKAFEEAIKLDPTYFEAWNYKCLALMKLEV 326

Query: 328 GRLEEAVKCF---------------NKALPLARDE------------AELSHIYSLRDAA 360
              EEA++ F               N+AL L + +            AEL   Y   DA 
Sbjct: 327 --YEEALEAFDSVLEIYPETKEIWYNRALALVKLQHFGEAAKSFSRTAELDPAYG--DAL 382

Query: 361 IAQMKVCER----------YNIKKKVSP---RSQNITKNEKLAIKQLRENNDIIIRPADK 407
             Q ++  R          ++   + +P   ++Q +     + + ++ E  D + +  +K
Sbjct: 383 YQQGRLLAREGKYEEALKAFDSMLEQNPEFIKAQKLRGTMLIKLGRIEEALDSLAQSLEK 442

Query: 408 GGKTVVMDKADYTQKMTSILNSNDYEIIPGDPTKTIE-ESEKYGNLENESGQKHAASDFT 466
             +   +    + Q+   +L++  +E       K  E + +      N+    ++   + 
Sbjct: 443 EPENYGL----WLQQGLILLDNGKFEPALKALEKVAELKPDNDACWMNKGYALYSMDRYE 498

Query: 467 KAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQRHFV 526
           +A  D +E  +++P +   +  +G +    G+ EEAL   +K ++L P+F  A   R  +
Sbjct: 499 EALEDFEEGLRLNPYLEKGWNNKGIVLGKLGRTEEALEAFEKAVSLRPDFEDAWKNRGLI 558



 Score = 62.0 bits (149), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 93/450 (20%), Positives = 188/450 (41%), Gaps = 51/450 (11%)

Query: 100 ARLLRATVYIFTSQSTKAIEDLTQLVEDTSVDPKIKVNAHIKRAVVHLHAASDFTKAFAD 159
           A+ LR T+ I   +  +A++ L Q +E    +P+      +++ ++ L     F  A   
Sbjct: 415 AQKLRGTMLIKLGRIEEALDSLAQSLEK---EPE-NYGLWLQQGLILLDNGK-FEPALKA 469

Query: 160 LDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQRHFVVHKMI 219
           L++  ++ P+    +  +G       +YEEAL + ++ + LNP             +K I
Sbjct: 470 LEKVAELKPDNDACWMNKGYALYSMDRYEEALEDFEEGLRLNPYLEKGWN------NKGI 523

Query: 220 VPGDRERVEQSLKEFRNFVDTHSNVVEACTLFAQVLVDQEDFDGAEEYFNRSIRVDPENA 279
           V G   R E++L+ F   V    +  +A      +L+  +D++ A E F+  ++ +PE+ 
Sbjct: 524 VLGKLGRTEEALEAFEKAVSLRPDFEDAWKNRGLILLAVDDYEKASEAFDEVLKTNPEDL 583

Query: 280 SLYVHRAMLMLQARGNVDEAIKLIEKAISIDKSCMFAYETLGTIEVQRGRLEEAVKCFNK 339
               +R   +L+  G  + A++  EK +S++        +L   + + G+ EEA++ F K
Sbjct: 584 DSIYNRGTALLKL-GKTETALECFEKILSLNPDYPDLLYSLAVAQAKLGKQEEALETFEK 642

Query: 340 A-------LPLARDEAELSHIYSLRDAAIAQMKVCERYNIKKKVSPRSQNITKNEKLAIK 392
                   L + R + + +      D A+      + ++      P S+     + LA+ 
Sbjct: 643 LAAKNPEDLKIQRRKGKFAMEIGKYDTAL------QAFDQVLSEKPESREAWYRKGLALI 696

Query: 393 QLREN-------NDIIIRPADKGGKTVVMDKADYTQKMTSILNSNDYEIIPGDPTKTIEE 445
           +L+         +++I+R  +       +  +DY +     L+ +D +    D TK  + 
Sbjct: 697 KLKRFEEAITAFDEVIVRNLNNKE----ISNSDYEELKN--LDRDDIDNPARDETKRPDY 750

Query: 446 SEKYGNLENESGQKHAASDFTKAFADL------------DEAEKVDPNVADSYYQRGQIY 493
            ++  + E+E+     A  + K FA +            + A +  PN    +Y RG   
Sbjct: 751 EDENPDYEDENSDYENARTY-KGFAQMQLERYLPALKTFESALEEKPNSDILWYYRGLSL 809

Query: 494 CLFGQYEEALRNLDKTIALNPNFHVARAQR 523
                 EEA    + ++ LNP    A   R
Sbjct: 810 YRINMLEEAACAFESSVRLNPEMKEALEYR 839



 Score = 60.1 bits (144), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 76/352 (21%), Positives = 149/352 (42%), Gaps = 24/352 (6%)

Query: 172 DSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQRHFVVHKMIVPGDRERVEQSL 231
           D  +QRG       +YE+++   +K +  +     A   R   + K+  P      E++L
Sbjct: 6   DEAFQRGLGLIKQKRYEKSINVFNKIVDKDSGHTGALFNRGLALLKIKKP------EEAL 59

Query: 232 KEFRNFVDTHSNVVEACTLFAQVLVDQEDFDGAEEYFNRSIRVDPENASLYVHRAMLMLQ 291
             F   +       +A       L   E F+ A E ++ ++ ++P+N  ++  + +   +
Sbjct: 60  DSFDQVLHFEPENFDALYKKGIALATLEKFEAALETYDNALEINPDNPKIWYQKGLAFAE 119

Query: 292 ARGNVDEAIKLIEKAISIDKSCMFAYETLGTIEVQRGRLEEAVKCFNKALPLARDEAELS 351
              N + +I   EKAI ++  C  A+   GT+  + G  EEA++CF  AL +    ++  
Sbjct: 120 LEKN-EASILCFEKAIELEPECGSAWYARGTVTGKTGNYEEALECFEHALEINPKNSDAC 178

Query: 352 HIYSLRDAAIAQM-KVCERYNIKKKVSPRSQNITKNEKLAIKQLRENNDIIIRPADKGGK 410
           +   L  A + +  +  E ++   +  PR ++  K +  ++ +L +N +  +   D   +
Sbjct: 179 YSKGLVLANLEKYGEALECFDSLIREKPRHKDAWKQKYFSLIKLGKNEE-ALECVDAFLR 237

Query: 411 TVVMDKADYTQKMTSILNSNDYEIIPGDPTKTIEESEKYGNLENESG----QKHAASDFT 466
              + +    QK   +   + YE      TK ++ +     +  + G    Q    +D  
Sbjct: 238 KFPVSETALYQKGILLNELSRYEDAEKTFTKILKINPGNKEIWLKKGLALIQLLRLNDAI 297

Query: 467 KAFADLDEAEKVDPNVADSYYQRGQIYCL----FGQYEEALRNLDKTIALNP 514
           KAF   +EA K+DP    +Y++     CL       YEEAL   D  + + P
Sbjct: 298 KAF---EEAIKLDP----TYFEAWNYKCLALMKLEVYEEALEAFDSVLEIYP 342



 Score = 58.2 bits (139), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 61/266 (22%), Positives = 111/266 (41%), Gaps = 23/266 (8%)

Query: 89   ESTSSNHTKALARLLRATVYIFTSQSTKAIEDLTQLVEDTSVDPKIKVNAHIKRAVV--H 146
            E  SS + K L  L+R   Y       +A+E  ++L E+  +  +      I  + +  H
Sbjct: 1016 EKYSSFYWKGLV-LIRLEAY------ERALEVFSRLTENNPLFVEAWYLKGISHSKLKQH 1068

Query: 147  LHAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHV 206
              AA DF K         ++DP   D+ YQ G  Y   G +EEA+R  +  + ++P    
Sbjct: 1069 KEAAKDFEKVL-------ELDPAYQDTCYQLGLSYFELGNFEEAIRVFESALKMDPENLD 1121

Query: 207  ARAQRHFVVHKMIVPGDRERVEQSLKEFRNFVDTHSNVVEACTLFAQVLVDQEDFDGAEE 266
            A   R   + +       +R  +S   FR  +  + +  EA    +     Q  ++ A  
Sbjct: 1122 ALYMRSLALLR------SKRYGESASGFREVLKRNPSDTEALAHLSTASFKQGFYEEALG 1175

Query: 267  YFNRSIRVDPENASLYVHRAMLMLQARGNVDEAIKLIEKAISIDKSCMFAYETLGTIEVQ 326
             F++ +  +PE  ++ + R  + L+A G V  A  + +  + +   C +A E       +
Sbjct: 1176 LFDQVLSKNPERKTV-LFRKGVALKALGEVKRASTIFDSVLKLKPDCTYALEQKAYTHFE 1234

Query: 327  RGRLEEAVKCFNKALPLARDEAELSH 352
                 EAV+ F  AL   + + +L +
Sbjct: 1235 LEEYPEAVEAFKTALEYCQKKEDLYY 1260



 Score = 45.4 bits (106), Expect = 0.086,   Method: Compositional matrix adjust.
 Identities = 48/202 (23%), Positives = 90/202 (44%), Gaps = 14/202 (6%)

Query: 168  PNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQRHFVVHKMIVPGDRE-- 225
            P+   ++Y+RG I    G Y EAL + ++  AL     +        + +      RE  
Sbjct: 1463 PDFEKAWYRRGLILFSLGYYVEALDSFEQA-ALEDQTEIPEEIDELSLDETQREKMRESP 1521

Query: 226  ------RVEQSLKEFRNFVDTHSNVVEACTLFAQVLVDQEDFDGAEEYFNRSIRVDPENA 279
                  R+E   +      +T    V      +Q+ +  E ++ A E F + + V PE +
Sbjct: 1522 ELEDETRLEDKFELKEKLSETELEDVWMKMGLSQLKL--EHYEAAIEIFEKLLEVKPEAS 1579

Query: 280  SLYVHRAMLMLQARGNVDEAIKLIEKAISIDKSCMFAYETLGTIEVQRGRLEEAVKCFNK 339
             L+ + A L L+     ++A++  E A+ +D +   A+E +G   ++    EEA + F+ 
Sbjct: 1580 DLW-YVAGLALRGLDQDEQAVEAFENAVELDPALEAAWEQIGLSLLRLNMYEEASQAFSS 1638

Query: 340  ALPLARDEAELSHIYSLRDAAI 361
            AL L  D   ++ +YS  +A+ 
Sbjct: 1639 ALTLKPD--NVNALYSRSEASF 1658


>gi|428320554|ref|YP_007118436.1| Tetratricopeptide TPR_1 repeat-containing protein [Oscillatoria
           nigro-viridis PCC 7112]
 gi|428244234|gb|AFZ10020.1| Tetratricopeptide TPR_1 repeat-containing protein [Oscillatoria
           nigro-viridis PCC 7112]
          Length = 411

 Score = 66.6 bits (161), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 54/248 (21%), Positives = 111/248 (44%), Gaps = 14/248 (5%)

Query: 151 SDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQ 210
            DF  A A  D+A ++ P   ++++ RG      G+ E+A+ + DK + + P+ H A   
Sbjct: 171 GDFEGAIASYDKALEIKPYSYEAWFNRGHALYDLGRLEDAITSYDKALEIKPDLHEAWYI 230

Query: 211 RHFVVHKMIVPGDRERVEQSLKEFRNFVDTHSNVVEACTLFAQVLVDQEDFDGAEEYFNR 270
           R   +  +       R+E ++  +   ++   +  EA       L +    +     +++
Sbjct: 231 RGLALANL------GRLEDAIASYDKALEIKPDYHEAWYNRGVALGNLGRLENEIASYDK 284

Query: 271 SIRVDPENASLYVHRAMLMLQARGNVDEAIKLIEKAISIDKSCMFAYETLGTIEVQRGRL 330
           ++ + P+    + +R +  L+  G +++AI   +KA+        A+   G    + GR+
Sbjct: 285 ALEIKPDYHEAWYNRGV-ALRDLGRIEDAIASCDKALKFKPDLHEAWYIRGLALGKLGRI 343

Query: 331 EEAVKCFNKALPLARDEAELSHIYSLRDAAIAQMKVCE----RYNIKKKVSPRSQNITKN 386
           E+AV  ++KAL    D  E  +I   R  A+ ++   E     ++   K  P     +KN
Sbjct: 344 EDAVASWDKALKFKPDYHEAWYI---RGVALVKLGRIEDAITSFDKALKFKPDDHLASKN 400

Query: 387 EKLAIKQL 394
             +A+K+L
Sbjct: 401 RTIALKKL 408



 Score = 45.8 bits (107), Expect = 0.062,   Method: Compositional matrix adjust.
 Identities = 40/198 (20%), Positives = 87/198 (43%), Gaps = 10/198 (5%)

Query: 171 ADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQRHFVVHKMIVPGDRERVEQS 230
           A++ + RG    + G +E A+ + DK + + P  + A   R   ++      D  R+E +
Sbjct: 157 AEACWNRGYEQLMKGDFEGAIASYDKALEIKPYSYEAWFNRGHALY------DLGRLEDA 210

Query: 231 LKEFRNFVDTHSNVVEACTLFAQVLVDQEDFDGAEEYFNRSIRVDPENASLYVHRAMLML 290
           +  +   ++   ++ EA  +    L +    + A   +++++ + P+    + +R +  L
Sbjct: 211 ITSYDKALEIKPDLHEAWYIRGLALANLGRLEDAIASYDKALEIKPDYHEAWYNRGV-AL 269

Query: 291 QARGNVDEAIKLIEKAISIDKSCMFAYETLGTIEVQRGRLEEAVKCFNKALPLARDEAEL 350
              G ++  I   +KA+ I      A+   G      GR+E+A+   +KAL    D   L
Sbjct: 270 GNLGRLENEIASYDKALEIKPDYHEAWYNRGVALRDLGRIEDAIASCDKALKFKPD---L 326

Query: 351 SHIYSLRDAAIAQMKVCE 368
              + +R  A+ ++   E
Sbjct: 327 HEAWYIRGLALGKLGRIE 344



 Score = 39.3 bits (90), Expect = 6.1,   Method: Compositional matrix adjust.
 Identities = 17/57 (29%), Positives = 31/57 (54%)

Query: 463 SDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVA 519
            DF  A A  D+A ++ P   ++++ RG      G+ E+A+ + DK + + P+ H A
Sbjct: 171 GDFEGAIASYDKALEIKPYSYEAWFNRGHALYDLGRLEDAITSYDKALEIKPDLHEA 227



 Score = 38.9 bits (89), Expect = 7.2,   Method: Compositional matrix adjust.
 Identities = 19/69 (27%), Positives = 37/69 (53%), Gaps = 3/69 (4%)

Query: 458 QKHAASDFTK---AFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNP 514
           + HA  D  +   A    D+A ++ P++ +++Y RG      G+ E+A+ + DK + + P
Sbjct: 197 RGHALYDLGRLEDAITSYDKALEIKPDLHEAWYIRGLALANLGRLEDAIASYDKALEIKP 256

Query: 515 NFHVARAQR 523
           ++H A   R
Sbjct: 257 DYHEAWYNR 265


>gi|145539113|ref|XP_001455251.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
 gi|124423050|emb|CAK87854.1| unnamed protein product [Paramecium tetraurelia]
          Length = 945

 Score = 66.6 bits (161), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 57/221 (25%), Positives = 111/221 (50%), Gaps = 23/221 (10%)

Query: 153 FTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQRH 212
           F +A  DL++A  ++ N   SYY R Q Y   GQ ++A+++L+K + +NPN   A  Q  
Sbjct: 343 FEEAIKDLNKAININSNSQFSYYNRAQSYLKIGQKDQAMKDLEKHVEINPNHSDAYYQLG 402

Query: 213 FVVHKMIVPGDRERVE----QSLKEFRNFVDTHSN-----VVEACTLFAQVLVDQEDFDG 263
           F++  +   G+  +      ++++    F   ++N     +++  +L   + + Q+ FD 
Sbjct: 403 FILTML---GNINQAFFYYCKAIQLNPKFQKAYANRGIDQILKVASLATSLGLKQQAFDD 459

Query: 264 AEEYFNRSIRVDPENASLYVHRAM------LMLQARGNVDEAIKLIEKAISIDKSCMFAY 317
                N++I +DP  ++ Y +R         +    GN + A+K + +AI ID +   A 
Sbjct: 460 ----LNKAIELDPNCSNSYYNRGFSFSILGTLFVNLGNFELALKDLNQAIQIDPNYQDAL 515

Query: 318 ETLGTIEVQRGRLEEAVKCFNKALPL-ARDEAELSHIYSLR 357
              G +    G+ +EA+K FN+ + L   + A L++I +L+
Sbjct: 516 NNRGLVYNHLGQKKEALKDFNQIILLNPTNGAVLNNIGTLQ 556



 Score = 58.9 bits (141), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 58/259 (22%), Positives = 120/259 (46%), Gaps = 15/259 (5%)

Query: 104 RATVYIFTSQSTKAIEDLTQLVEDTSVDPKIKVNAHIKRAVVHLHAASDFTKAFADLDEA 163
           R+ +Y    +  +AI+DL + +   S        ++  RA  +L       +A  DL++ 
Sbjct: 333 RSELYFRLERFEEAIKDLNKAININSNSQF----SYYNRAQSYLKIGQK-DQAMKDLEKH 387

Query: 164 EKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQRHF-----VVHKM 218
            +++PN +D+YYQ G I  + G   +A     K I LNP F  A A R       V    
Sbjct: 388 VEINPNHSDAYYQLGFILTMLGNINQAFFYYCKAIQLNPKFQKAYANRGIDQILKVASLA 447

Query: 219 IVPGDRER----VEQSLKEFRNFVDTHSNVVEACTLFAQVLVDQEDFDGAEEYFNRSIRV 274
              G +++    + ++++   N  +++ N   + ++   + V+  +F+ A +  N++I++
Sbjct: 448 TSLGLKQQAFDDLNKAIELDPNCSNSYYNRGFSFSILGTLFVNLGNFELALKDLNQAIQI 507

Query: 275 DPENASLYVHRAMLMLQARGNVDEAIKLIEKAISIDKSCMFAYETLGTIEVQRGRLEEAV 334
           DP       +R  L+    G   EA+K   + I ++ +       +GT++  +G  ++++
Sbjct: 508 DPNYQDALNNRG-LVYNHLGQKKEALKDFNQIILLNPTNGAVLNNIGTLQFYQGLRQDSL 566

Query: 335 KCFNKALPLARDEAELSHI 353
           + F KA    ++   L +I
Sbjct: 567 QSFLKANQYCQNPVILVNI 585



 Score = 55.5 bits (132), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 44/185 (23%), Positives = 91/185 (49%), Gaps = 26/185 (14%)

Query: 176 QRGQIYCLFGQYEEALRNLDKTIALNPNFHVA---RAQRHFVVHKMIVPGDRERVEQSLK 232
           QR ++Y    ++EEA+++L+K I +N N   +   RAQ +  +      G +   +Q++K
Sbjct: 332 QRSELYFRLERFEEAIKDLNKAININSNSQFSYYNRAQSYLKI------GQK---DQAMK 382

Query: 233 EFRNFVDTHSNVVEACTLFAQVLVDQEDFDGAEEYFNRSIRVDPENASLYVHRAMLMLQA 292
           +    V+ + N  +A      +L    + + A  Y+ ++I+++P+    Y +R +  +  
Sbjct: 383 DLEKHVEINPNHSDAYYQLGFILTMLGNINQAFFYYCKAIQLNPKFQKAYANRGIDQILK 442

Query: 293 RGNVDEAIKL-------IEKAISIDKSCM-------FAYETLGTIEVQRGRLEEAVKCFN 338
             ++  ++ L       + KAI +D +C        F++  LGT+ V  G  E A+K  N
Sbjct: 443 VASLATSLGLKQQAFDDLNKAIELDPNCSNSYYNRGFSFSILGTLFVNLGNFELALKDLN 502

Query: 339 KALPL 343
           +A+ +
Sbjct: 503 QAIQI 507



 Score = 51.2 bits (121), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 24/69 (34%), Positives = 42/69 (60%), Gaps = 7/69 (10%)

Query: 467 KAFADLDEAEKVDPNVADSYYQR-------GQIYCLFGQYEEALRNLDKTIALNPNFHVA 519
           +AF DL++A ++DPN ++SYY R       G ++   G +E AL++L++ I ++PN+  A
Sbjct: 455 QAFDDLNKAIELDPNCSNSYYNRGFSFSILGTLFVNLGNFELALKDLNQAIQIDPNYQDA 514

Query: 520 RAQRHFVWT 528
              R  V+ 
Sbjct: 515 LNNRGLVYN 523



 Score = 49.7 bits (117), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 31/93 (33%), Positives = 46/93 (49%), Gaps = 10/93 (10%)

Query: 436 PGDPTKTIEESEKYGNLENESGQKHAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCL 495
           P D     + SE Y  LE           F +A  DL++A  ++ N   SYY R Q Y  
Sbjct: 324 PKDEQYLNQRSELYFRLER----------FEEAIKDLNKAININSNSQFSYYNRAQSYLK 373

Query: 496 FGQYEEALRNLDKTIALNPNFHVARAQRHFVWT 528
            GQ ++A+++L+K + +NPN   A  Q  F+ T
Sbjct: 374 IGQKDQAMKDLEKHVEINPNHSDAYYQLGFILT 406



 Score = 47.8 bits (112), Expect = 0.014,   Method: Compositional matrix adjust.
 Identities = 21/52 (40%), Positives = 33/52 (63%)

Query: 463 SDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNP 514
            +F  A  DL++A ++DPN  D+   RG +Y   GQ +EAL++ ++ I LNP
Sbjct: 492 GNFELALKDLNQAIQIDPNYQDALNNRGLVYNHLGQKKEALKDFNQIILLNP 543



 Score = 44.7 bits (104), Expect = 0.14,   Method: Compositional matrix adjust.
 Identities = 22/57 (38%), Positives = 32/57 (56%)

Query: 467 KAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQR 523
           +A  DL++  +++PN +D+YYQ G I  + G   +A     K I LNP F  A A R
Sbjct: 379 QAMKDLEKHVEINPNHSDAYYQLGFILTMLGNINQAFFYYCKAIQLNPKFQKAYANR 435


>gi|298244613|ref|ZP_06968419.1| serine/threonine protein kinase with TPR repeats [Ktedonobacter
           racemifer DSM 44963]
 gi|297552094|gb|EFH85959.1| serine/threonine protein kinase with TPR repeats [Ktedonobacter
           racemifer DSM 44963]
          Length = 853

 Score = 66.6 bits (161), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 56/243 (23%), Positives = 111/243 (45%), Gaps = 21/243 (8%)

Query: 151 SDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQ 210
            D+++A  +L +A KV P    +Y++R  +     QYE+AL   +K  AL+P    A+  
Sbjct: 551 GDYSRALEELSQAAKVRPTYTRAYHERALLLYTLQQYEQALVEFEKAFALDPT--NAKYW 608

Query: 211 RHFVVHKMIVPGDRERVEQSLKEFRNFVDTHSNVVEACTLFAQVLVDQEDFDGAEEYFNR 270
             F    + + G+    +  L+     +  H  + EA    A      + F  A + ++R
Sbjct: 609 SEFTSLLLKLGGNDLVRDMLLR----VIQRHPTLSEAWFQLASCSAYNDRFVSAHQQYSR 664

Query: 271 SIRVDPENASLYVHRAMLMLQARGNVDEAIKLIEKAISIDKSCMFAYETLGTIEVQRGRL 330
           +++ +P NA  Y  RA+  L+ + + + A+    +A ++D      ++T G + +  G+ 
Sbjct: 665 ALKFNPHNAFAYAMRALCNLEMK-HYNSALVDCRRASALDPEHYLPWQTRGNVFLAIGQN 723

Query: 331 EEAVKCFNKALPLARDEAELSHIYSLRDAAIAQMKVCERY---NIKKKVSPRSQNITKNE 387
           + A + F++ +    D           DAA  Q +    Y   N  + ++  +Q +T +E
Sbjct: 724 DRAYQAFSQLIERNPD-----------DAANWQTRATASYQAHNYAQAIADCTQALTLDE 772

Query: 388 KLA 390
           +LA
Sbjct: 773 ELA 775



 Score = 55.5 bits (132), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 95/486 (19%), Positives = 187/486 (38%), Gaps = 66/486 (13%)

Query: 72  FEHEDYLTAIRHCTEEIESTSSNHTKALARLLRATVYIFTSQSTKAIEDLTQLVEDTSVD 131
           +E +DY  A+      +E         +A   RA VY    Q  +AI + T ++E    D
Sbjct: 344 YELKDYAAALEDLNHVVEFAPDLQ---VAYKYRALVYHKLEQFEQAIANQTHILERDDAD 400

Query: 132 PKIKVNAHIKRAVVHLHAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEAL 191
             +  N    R   +      F  A AD  +A  + P  A +Y  +  +Y   G++++A 
Sbjct: 401 AVMYNN----RGYAY-QRLEQFQAALADFQQAITLFPRFALAYANQAGVYRELGEFQKAQ 455

Query: 192 RNLDKTIALNPNFHVARAQRHFVVHKMIVPGDRERVEQSLKEFRNFVDTHSNVVEACTLF 251
            N+ + + L P   +A  ++  ++HK+       R E++L   R+  + + +        
Sbjct: 456 DNIQQALELEPTLVLAYNEQAMLLHKL------GRHEEALACIRHAQEINPHDTHTWVAL 509

Query: 252 AQVLVDQEDFDGAEEYFNRSIRVDPENASLYVHRAMLMLQARGNVDEAIKLIEKAISIDK 311
             +  D E+++ A   F R++ ++P +A  +     + ++  G+   A++ + +A  +  
Sbjct: 510 GGISYDLEEYEQARIAFTRALELEPASADGWYLLGCISIKL-GDYSRALEELSQAAKVRP 568

Query: 312 SCMFAYETLGTIEVQRGRLEEAVKCFNKALPLARDEAE-LSHIYSL----------RDA- 359
           +   AY     +     + E+A+  F KA  L    A+  S   SL          RD  
Sbjct: 569 TYTRAYHERALLLYTLQQYEQALVEFEKAFALDPTNAKYWSEFTSLLLKLGGNDLVRDML 628

Query: 360 ------------AIAQMKVCERYNIK-----------KKVSPRSQNITKNEKLAIKQLRE 396
                       A  Q+  C  YN +            K +P +        L   +++ 
Sbjct: 629 LRVIQRHPTLSEAWFQLASCSAYNDRFVSAHQQYSRALKFNPHNAFAYAMRALCNLEMKH 688

Query: 397 NNDIIIRPADKGGKTVVMDKADYTQKMTS-----ILNSND--YEIIPGDPTKTIEES-EK 448
            N  ++       +   +D   Y    T       +  ND  Y+      ++ IE + + 
Sbjct: 689 YNSALV----DCRRASALDPEHYLPWQTRGNVFLAIGQNDRAYQAF----SQLIERNPDD 740

Query: 449 YGNLENESGQKHAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDK 508
             N +  +   + A ++ +A AD  +A  +D  +A++Y  R Q         EA+ +   
Sbjct: 741 AANWQTRATASYQAHNYAQAIADCTQALTLDEELAEAYLTRAQSQRELAHLTEAIADYQN 800

Query: 509 TIALNP 514
            +A +P
Sbjct: 801 YLAASP 806



 Score = 54.7 bits (130), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 98/454 (21%), Positives = 171/454 (37%), Gaps = 61/454 (13%)

Query: 113 QSTKAIEDLTQLVEDTSVDPKIKVNAHIKRAVVHLHAASDFTKAFADLDEAEKVDPNVAD 172
           ++++A  D   L  D + +   ++ A   +A+V LH A  + +A      A  ++P   +
Sbjct: 278 EASQAKADFYALPIDWAQEASAQLWA--DQALV-LHDAKRYEEAKETCSRALALNPRFYE 334

Query: 173 SYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQRHFVVHKM-------------- 218
           +Y  R  I      Y  AL +L+  +   P+  VA   R  V HK+              
Sbjct: 335 AYAHRALIKYELKDYAAALEDLNHVVEFAPDLQVAYKYRALVYHKLEQFEQAIANQTHIL 394

Query: 219 -------IVPGDRERVEQSLKEFRNFVDTHSNVVEACTLF----------AQVLVDQEDF 261
                  ++  +R    Q L++F+  +   ++  +A TLF          A V  +  +F
Sbjct: 395 ERDDADAVMYNNRGYAYQRLEQFQAAL---ADFQQAITLFPRFALAYANQAGVYRELGEF 451

Query: 262 DGAEEYFNRSIRVDPENASLYVHRAMLMLQARGNVDEAIKLIEKAISIDKSCMFAYETLG 321
             A++   +++ ++P     Y  +AML L   G  +EA+  I  A  I+      +  LG
Sbjct: 452 QKAQDNIQQALELEPTLVLAYNEQAML-LHKLGRHEEALACIRHAQEINPHDTHTWVALG 510

Query: 322 TIEVQRGRLEEAVKCFNKALPLARDEAELSHIYSLRDAAIAQM-KVCERYNIKKKVSPRS 380
            I       E+A   F +AL L    A+  ++       +    +  E  +   KV P  
Sbjct: 511 GISYDLEEYEQARIAFTRALELEPASADGWYLLGCISIKLGDYSRALEELSQAAKVRPTY 570

Query: 381 QNITKNEKLAIKQLRENNDIIIRPADKGGKTVVMD--KADYTQKMTSI---LNSND---- 431
                   L +  L++    ++    +  K   +D   A Y  + TS+   L  ND    
Sbjct: 571 TRAYHERALLLYTLQQYEQALV----EFEKAFALDPTNAKYWSEFTSLLLKLGGNDLVRD 626

Query: 432 --YEIIPGDPTKTIEESEKYGNLENESGQKHAASDFTKAFADLDEAEKVDPNVADSYYQR 489
               +I   PT     SE +  L + S        F  A      A K +P+ A +Y  R
Sbjct: 627 MLLRVIQRHPTL----SEAWFQLASCSAYN---DRFVSAHQQYSRALKFNPHNAFAYAMR 679

Query: 490 GQIYCLFGQYEEALRNLDKTIALNPNFHVARAQR 523
                    Y  AL +  +  AL+P  ++    R
Sbjct: 680 ALCNLEMKHYNSALVDCRRASALDPEHYLPWQTR 713


>gi|416402040|ref|ZP_11687331.1| TPR repeat-containing protein [Crocosphaera watsonii WH 0003]
 gi|357261962|gb|EHJ11169.1| TPR repeat-containing protein [Crocosphaera watsonii WH 0003]
          Length = 207

 Score = 66.6 bits (161), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 46/156 (29%), Positives = 76/156 (48%), Gaps = 7/156 (4%)

Query: 151 SDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQ 210
            D   A  D ++A + +P  +D+Y  RG  Y L  Q EEA++N ++ I L+P        
Sbjct: 34  GDLKAALEDYNQAIEANPQNSDAYSNRGNAYFLLKQPEEAMKNYNQAIKLDPELSRPYYN 93

Query: 211 RHFVVHKMIVPGDRERVEQSLKEFRNFVDTHSNVVEACTLFAQVLVDQEDFDGAEEYFNR 270
           R F+  +   P      E ++K++   +  + + + A    A VL    D  GA E +N+
Sbjct: 94  RGFLYQREGKP------ELAVKDYNKTISLNPDYIPAYLNRAVVLSILGDNQGAIEDYNK 147

Query: 271 SIRVDPENASLYVHRAMLMLQARGNVDEAIKLIEKA 306
            I  DP    LY +RA    +  GN ++A++ +EKA
Sbjct: 148 VIETDPNLPQLYFNRAASYSEL-GNPEKAMEDLEKA 182



 Score = 45.8 bits (107), Expect = 0.057,   Method: Compositional matrix adjust.
 Identities = 22/70 (31%), Positives = 36/70 (51%)

Query: 458 QKHAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFH 517
           +K    D   A  D ++A + +P  +D+Y  RG  Y L  Q EEA++N ++ I L+P   
Sbjct: 29  EKVKKGDLKAALEDYNQAIEANPQNSDAYSNRGNAYFLLKQPEEAMKNYNQAIKLDPELS 88

Query: 518 VARAQRHFVW 527
                R F++
Sbjct: 89  RPYYNRGFLY 98



 Score = 44.7 bits (104), Expect = 0.12,   Method: Compositional matrix adjust.
 Identities = 22/62 (35%), Positives = 39/62 (62%)

Query: 467 KAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQRHFV 526
           +A  + ++A K+DP ++  YY RG +Y   G+ E A+++ +KTI+LNP++  A   R  V
Sbjct: 72  EAMKNYNQAIKLDPELSRPYYNRGFLYQREGKPELAVKDYNKTISLNPDYIPAYLNRAVV 131

Query: 527 WT 528
            +
Sbjct: 132 LS 133



 Score = 43.9 bits (102), Expect = 0.21,   Method: Compositional matrix adjust.
 Identities = 32/111 (28%), Positives = 56/111 (50%), Gaps = 7/111 (6%)

Query: 240 THSNVVEACTLFAQVL--VDQEDFDGAEEYFNRSIRVDPENASLYVHR--AMLMLQARGN 295
              ++ ++  L+ Q L  V + D   A E +N++I  +P+N+  Y +R  A  +L+    
Sbjct: 13  AEGDIKKSEVLYQQALEKVKKGDLKAALEDYNQAIEANPQNSDAYSNRGNAYFLLK---Q 69

Query: 296 VDEAIKLIEKAISIDKSCMFAYETLGTIEVQRGRLEEAVKCFNKALPLARD 346
            +EA+K   +AI +D      Y   G +  + G+ E AVK +NK + L  D
Sbjct: 70  PEEAMKNYNQAIKLDPELSRPYYNRGFLYQREGKPELAVKDYNKTISLNPD 120


>gi|425466283|ref|ZP_18845586.1| hypothetical protein MICAH_3760003 [Microcystis aeruginosa PCC
           9809]
 gi|389831288|emb|CCI26096.1| hypothetical protein MICAH_3760003 [Microcystis aeruginosa PCC
           9809]
          Length = 187

 Score = 66.6 bits (161), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 52/195 (26%), Positives = 98/195 (50%), Gaps = 14/195 (7%)

Query: 138 AHIKRAVVHLHAASDFTK---AFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNL 194
           A+  R +++    SD  K   A +D ++A  ++PN A++Y  RG +Y    +YE AL + 
Sbjct: 2   AYNNRGLLY----SDLQKYELALSDYNKAIDINPNYANAYVNRGGLYSDLQKYELALSDY 57

Query: 195 DKTIALNPNFHVARAQRHFVVHKMIVPGDRERVEQSLKEFRNFVDTHSNVVEACTLFAQV 254
           +K I +NPNF    AQ +F  ++ ++  D ++ + +L +F   +D + N  EA      +
Sbjct: 58  NKAIDINPNF----AQAYF--NRGVLYIDLQKYDLALSDFSKAIDINRNFAEAYNNRGNL 111

Query: 255 LVDQEDFDGAEEYFNRSIRVDPENASLYVHRAMLMLQARGNVDEAIKLIEKAISI-DKSC 313
              Q+ ++ A   ++++I ++P  A  Y +R +L    +      I L + AI    ++ 
Sbjct: 112 YNLQQKYELALADYSKAIEINPNYAEAYANRGVLYAILKQTEKAKIDLQQAAILFRQQNN 171

Query: 314 MFAYETLGTIEVQRG 328
           M  YE +  +  Q G
Sbjct: 172 MATYEKVMQLLQQLG 186



 Score = 48.5 bits (114), Expect = 0.008,   Method: Compositional matrix adjust.
 Identities = 28/80 (35%), Positives = 43/80 (53%), Gaps = 3/80 (3%)

Query: 463 SDFTK---AFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVA 519
           SD  K   A +D ++A  ++PN A++Y  RG +Y    +YE AL + +K I +NPNF  A
Sbjct: 11  SDLQKYELALSDYNKAIDINPNYANAYVNRGGLYSDLQKYELALSDYNKAIDINPNFAQA 70

Query: 520 RAQRHFVWTSTLAELMAFSD 539
              R  ++       +A SD
Sbjct: 71  YFNRGVLYIDLQKYDLALSD 90



 Score = 48.1 bits (113), Expect = 0.010,   Method: Compositional matrix adjust.
 Identities = 45/180 (25%), Positives = 85/180 (47%), Gaps = 9/180 (5%)

Query: 173 SYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQRHFVVHKMIVPGDRERVEQSLK 232
           +Y  RG +Y    +YE AL + +K I +NPN+  A       V++  +  D ++ E +L 
Sbjct: 2   AYNNRGLLYSDLQKYELALSDYNKAIDINPNYANA------YVNRGGLYSDLQKYELALS 55

Query: 233 EFRNFVDTHSNVVEACTLFAQVLVDQEDFDGAEEYFNRSIRVDPENASLYVHRAMLM-LQ 291
           ++   +D + N  +A      + +D + +D A   F+++I ++   A  Y +R  L  LQ
Sbjct: 56  DYNKAIDINPNFAQAYFNRGVLYIDLQKYDLALSDFSKAIDINRNFAEAYNNRGNLYNLQ 115

Query: 292 ARGNVDEAIKLIEKAISIDKSCMFAYETLGTIEVQRGRLEEAVKCFNKALPLARDEAELS 351
            +   + A+    KAI I+ +   AY   G +     + E+A     +A  L R +  ++
Sbjct: 116 QK--YELALADYSKAIEINPNYAEAYANRGVLYAILKQTEKAKIDLQQAAILFRQQNNMA 173



 Score = 47.8 bits (112), Expect = 0.015,   Method: Compositional matrix adjust.
 Identities = 31/109 (28%), Positives = 51/109 (46%), Gaps = 1/109 (0%)

Query: 432 YEIIPGDPTKTIEESEKYGN-LENESGQKHAASDFTKAFADLDEAEKVDPNVADSYYQRG 490
           YE+   D  K I+ +  Y N   N  G       +  A +D ++A  ++PN A +Y+ RG
Sbjct: 16  YELALSDYNKAIDINPNYANAYVNRGGLYSDLQKYELALSDYNKAIDINPNFAQAYFNRG 75

Query: 491 QIYCLFGQYEEALRNLDKTIALNPNFHVARAQRHFVWTSTLAELMAFSD 539
            +Y    +Y+ AL +  K I +N NF  A   R  ++       +A +D
Sbjct: 76  VLYIDLQKYDLALSDFSKAIDINRNFAEAYNNRGNLYNLQQKYELALAD 124



 Score = 45.4 bits (106), Expect = 0.073,   Method: Compositional matrix adjust.
 Identities = 35/154 (22%), Positives = 75/154 (48%), Gaps = 4/154 (2%)

Query: 216 HKMIVPGDRERVEQSLKEFRNFVDTHSNVVEACTLFAQVLVDQEDFDGAEEYFNRSIRVD 275
           ++ ++  D ++ E +L ++   +D + N   A      +  D + ++ A   +N++I ++
Sbjct: 5   NRGLLYSDLQKYELALSDYNKAIDINPNYANAYVNRGGLYSDLQKYELALSDYNKAIDIN 64

Query: 276 PENASLYVHRAMLMLQARGNVDEAIKLIEKAISIDKSCMFAYETLGTIEVQRGRLEEAVK 335
           P  A  Y +R +L +  +   D A+    KAI I+++   AY   G +   + + E A+ 
Sbjct: 65  PNFAQAYFNRGVLYIDLQ-KYDLALSDFSKAIDINRNFAEAYNNRGNLYNLQQKYELALA 123

Query: 336 CFNKALPLARDEAELSHIYSLRDAAIAQMKVCER 369
            ++KA+ +  + AE    Y+ R    A +K  E+
Sbjct: 124 DYSKAIEINPNYAE---AYANRGVLYAILKQTEK 154



 Score = 43.9 bits (102), Expect = 0.20,   Method: Compositional matrix adjust.
 Identities = 33/105 (31%), Positives = 50/105 (47%), Gaps = 15/105 (14%)

Query: 432 YEIIPGDPTKTIEESEKYGNLENESG------QKH--AASDFTKAFADLDEAEKVDPNVA 483
           YE+   D  K I+ +  +       G      QK+  A SDF+KA         ++ N A
Sbjct: 50  YELALSDYNKAIDINPNFAQAYFNRGVLYIDLQKYDLALSDFSKAI-------DINRNFA 102

Query: 484 DSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQRHFVWT 528
           ++Y  RG +Y L  +YE AL +  K I +NPN+  A A R  ++ 
Sbjct: 103 EAYNNRGNLYNLQQKYELALADYSKAIEINPNYAEAYANRGVLYA 147


>gi|427723490|ref|YP_007070767.1| hypothetical protein Lepto7376_1597 [Leptolyngbya sp. PCC 7376]
 gi|427355210|gb|AFY37933.1| Tetratricopeptide TPR_1 repeat-containing protein [Leptolyngbya sp.
           PCC 7376]
          Length = 434

 Score = 66.2 bits (160), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 87/421 (20%), Positives = 175/421 (41%), Gaps = 69/421 (16%)

Query: 153 FTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQRH 212
           + +A A  +EA K++P+   ++  RG +    G+YE+++ + D+ + + P    A   R 
Sbjct: 30  YEEALACYNEAIKLEPDYYAAWLNRGNVCYKLGRYEDSIMSYDQALEIRPICEHALNNRR 89

Query: 213 FVVHKMIVPGDRERVEQSLKEFRNFVDTHSN-----------VVEACTLFAQVLVDQED- 260
           FV         +E+ ++ L  F      +++           V EA   F +V++  +D 
Sbjct: 90  FVC--------KEKSDELLNSFDECTALYTDDDPESWYIQALVYEAFGQFYEVVMHCDDA 141

Query: 261 -----------------------FDGAEEYFNRSIRVDPEN--ASLYVHRAMLMLQARGN 295
                                  ++ A + +N+++  +P+N  A       + +L+    
Sbjct: 142 LSVKSDYSRAWYERANALYELKRYEEAVDSYNKTVEFNPKNNEARYRCSNTLCLLK---K 198

Query: 296 VDEAIKLIEKAISIDKSCMFAYETLGTIEVQRGRLEEAVKCFNKALPLARDEAELSHIYS 355
            DEA+   ++ ++ D   + A    G +  + GR EEA+ C+ K L L  D     H   
Sbjct: 199 YDEALASYDETLAFDPENIDAINNKGLVLKELGRKEEALDCYGKVLELKPDHHYAWHNRV 258

Query: 356 LRDAAIA-QMKVCERYNIKKKVSPRSQNITKNEKLAIKQLRENNDIIIRPADKGGKTVVM 414
              +A+  Q +    Y+   +  P  +    N  + + +L E N+  I   DK  +    
Sbjct: 259 ADLSAMGRQEEALASYDKATECDPNCETTWYNRAIVL-ELSERNEEAIASYDKALELTPN 317

Query: 415 DKADYTQKMTSILNSNDYE--------IIPGDPTKTIEESEKYGNLENESGQKHAASDFT 466
           D     +K  ++  +  YE        +I   P   +   +K   LE +SG+  AA    
Sbjct: 318 DNQTRYKKALALEKTGQYEAAIDIYDYLIEIRPNYYLTWFQKGIALE-KSGEYEAA---- 372

Query: 467 KAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKT----IALNPNFHVARAQ 522
              A  D+A ++ P++ D++ +RG +    G+ EEA+ +  K     I + P++ +   +
Sbjct: 373 --IASYDKALELRPDLHDAWQKRGDVLSALGREEEAIASHKKATEGIITVAPDYIIIDGK 430

Query: 523 R 523
           +
Sbjct: 431 K 431



 Score = 48.9 bits (115), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 63/266 (23%), Positives = 109/266 (40%), Gaps = 15/266 (5%)

Query: 81  IRHCTEEIESTSSNHTKALARLLRATVYIFTSQSTKAIEDLTQLVEDTSVDPKIKVNAHI 140
           + HC + + S  S++++A     RA       +  +A++   + VE    +PK   N   
Sbjct: 135 VMHCDDAL-SVKSDYSRAWYE--RANALYELKRYEEAVDSYNKTVE---FNPK--NNEAR 186

Query: 141 KRAVVHLHAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIAL 200
            R    L     + +A A  DE    DP   D+   +G +    G+ EEAL    K + L
Sbjct: 187 YRCSNTLCLLKKYDEALASYDETLAFDPENIDAINNKGLVLKELGRKEEALDCYGKVLEL 246

Query: 201 NPNFHVARAQRHFVVHKMIVPGDRERVEQSLKEFRNFVDTHSNVVEACTLFAQVLVDQED 260
            P+ H A   R   V  +   G   R E++L  +    +   N        A VL   E 
Sbjct: 247 KPDHHYAWHNR---VADLSAMG---RQEEALASYDKATECDPNCETTWYNRAIVLELSER 300

Query: 261 FDGAEEYFNRSIRVDPENASLYVHRAMLMLQARGNVDEAIKLIEKAISIDKSCMFAYETL 320
            + A   +++++ + P N +   ++  L L+  G  + AI + +  I I  +    +   
Sbjct: 301 NEEAIASYDKALELTP-NDNQTRYKKALALEKTGQYEAAIDIYDYLIEIRPNYYLTWFQK 359

Query: 321 GTIEVQRGRLEEAVKCFNKALPLARD 346
           G    + G  E A+  ++KAL L  D
Sbjct: 360 GIALEKSGEYEAAIASYDKALELRPD 385



 Score = 42.7 bits (99), Expect = 0.46,   Method: Compositional matrix adjust.
 Identities = 43/202 (21%), Positives = 91/202 (45%), Gaps = 8/202 (3%)

Query: 142 RAVVHLHAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALN 201
           +A+V+  A   F +     D+A  V  + + ++Y+R        +YEEA+ + +KT+  N
Sbjct: 121 QALVY-EAFGQFYEVVMHCDDALSVKSDYSRAWYERANALYELKRYEEAVDSYNKTVEFN 179

Query: 202 PNFHVARAQRHFVVHKMIVPGDRERVEQSLKEFRNFVDTHSNVVEACTLFAQVLVDQEDF 261
           P  + AR +    +  +      ++ +++L  +   +      ++A      VL +    
Sbjct: 180 PKNNEARYRCSNTLCLL------KKYDEALASYDETLAFDPENIDAINNKGLVLKELGRK 233

Query: 262 DGAEEYFNRSIRVDPENASLYVHRAMLMLQARGNVDEAIKLIEKAISIDKSCMFAYETLG 321
           + A + + + + + P++   + H  +  L A G  +EA+   +KA   D +C   +    
Sbjct: 234 EEALDCYGKVLELKPDHHYAW-HNRVADLSAMGRQEEALASYDKATECDPNCETTWYNRA 292

Query: 322 TIEVQRGRLEEAVKCFNKALPL 343
            +     R EEA+  ++KAL L
Sbjct: 293 IVLELSERNEEAIASYDKALEL 314



 Score = 42.4 bits (98), Expect = 0.62,   Method: Compositional matrix adjust.
 Identities = 39/168 (23%), Positives = 74/168 (44%), Gaps = 14/168 (8%)

Query: 144 VVHLHAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPN 203
           V  L A     +A A  D+A + DPN   ++Y R  +  L  + EEA+ + DK + L PN
Sbjct: 258 VADLSAMGRQEEALASYDKATECDPNCETTWYNRAIVLELSERNEEAIASYDKALELTPN 317

Query: 204 FHVARAQRHFVVHKMIVPGDRERVEQSLKEFRNFVDTHSNVVEACTLFAQVLVDQEDFDG 263
            +  R ++   + K        + E ++  +   ++   N           L    +++ 
Sbjct: 318 DNQTRYKKALALEKT------GQYEAAIDIYDYLIEIRPNYYLTWFQKGIALEKSGEYEA 371

Query: 264 AEEYFNRSIRVDPENASLYVHRAMLMLQARGNVDEAIKLIEKAISIDK 311
           A   +++++ + P+     +H A    Q RG+V  A+   E+AI+  K
Sbjct: 372 AIASYDKALELRPD-----LHDAW---QKRGDVLSALGREEEAIASHK 411


>gi|354567939|ref|ZP_08987106.1| serine/threonine protein kinase [Fischerella sp. JSC-11]
 gi|353541613|gb|EHC11080.1| serine/threonine protein kinase [Fischerella sp. JSC-11]
          Length = 759

 Score = 66.2 bits (160), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 74/368 (20%), Positives = 158/368 (42%), Gaps = 50/368 (13%)

Query: 153 FTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQRH 212
           +  A +  ++A K+ P+ A+++  +G       +Y+ AL   D+ I + P++  A   R 
Sbjct: 387 YQDALSAFEKAVKIRPDYAEAWNGQGSTLSKLKEYKAALTAYDRAIQIQPDYLEAWIGRG 446

Query: 213 FVVHKMIVPGDRERVEQSLKEFRNFVDTHSNVVEACTLFAQVLVDQEDFDGAEEYFNRSI 272
           FV+  +      +R ++++  F   +   +N  +  T   +VL   + +D A   + ++I
Sbjct: 447 FVLKNL------QRYQEAIASFDKALQLDTNSPQLWTTKGEVLSSLKRYDEAISAYEQAI 500

Query: 273 RVDPENASLYVHRAMLMLQARGNVDEAIKLIEKAISIDKSCMFAYETLGTIEVQRGRLEE 332
            +  ++ + + ++A L LQ     +EA++  +KA+ I  S   A+   G   V   R ++
Sbjct: 501 NLKKDDYTAWYNKA-LTLQNLKRYEEAVRAYDKAVEIKPSYAEAWYNRGNALVNLQRYQD 559

Query: 333 AVKCFNKALPLARD--EAELSH---IYSLRDAAIAQMKVCERYNIKKKVSPRSQNITKNE 387
           A   ++KA+ +     +A LS    + SL+    A     E  N   +++P++      +
Sbjct: 560 AFTAYDKAVQINPTYYQAWLSRGNILISLQRYPEA----VESLNQVIQINPQNYQAWYAK 615

Query: 388 KLAIKQLRENNDIIIRPADKGGKTVVMDKADYTQKMTSILNSNDYEIIPGDPTKTIEESE 447
             +  Q++  N+ +               A Y Q   + L  NDY++             
Sbjct: 616 GWSQHQMQRYNEAL---------------AAYDQ--AAELKRNDYQL------------- 645

Query: 448 KYGNLENESGQKHAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLD 507
                 N     +    + +A A  D A + +P   +S++ RG       +Y+EA+ + +
Sbjct: 646 ----WYNRGNSLYNLQKYEEAIASYDRAVRYNPQHYESWFSRGNALFNLLRYQEAIASYN 701

Query: 508 KTIALNPN 515
           + I + P+
Sbjct: 702 QAIKIKPD 709



 Score = 50.4 bits (119), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 48/260 (18%), Positives = 112/260 (43%), Gaps = 36/260 (13%)

Query: 147 LHAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHV 206
           L    ++  A    D A ++ P+  +++  RG +     +Y+EA+ + DK + L+ N   
Sbjct: 415 LSKLKEYKAALTAYDRAIQIQPDYLEAWIGRGFVLKNLQRYQEAIASFDKALQLDTNSPQ 474

Query: 207 ARAQRHFVV----------------------------HKMIVPGDRERVEQSLKEFRNFV 238
               +  V+                            +K +   + +R E++++ +   V
Sbjct: 475 LWTTKGEVLSSLKRYDEAISAYEQAINLKKDDYTAWYNKALTLQNLKRYEEAVRAYDKAV 534

Query: 239 DTHSNVVEACTLFAQVLVDQEDFDGAEEYFNRSIRVDPENASLYVHRAMLMLQARGNVDE 298
           +   +  EA       LV+ + +  A   ++++++++P     ++ R  +++  +    E
Sbjct: 535 EIKPSYAEAWYNRGNALVNLQRYQDAFTAYDKAVQINPTYYQAWLSRGNILISLQ-RYPE 593

Query: 299 AIKLIEKAISIDKSCMFAYETLGTIEVQRGRLEEAVKCFNKALPLARDEAELSH-----I 353
           A++ + + I I+     A+   G  + Q  R  EA+  +++A  L R++ +L +     +
Sbjct: 594 AVESLNQVIQINPQNYQAWYAKGWSQHQMQRYNEALAAYDQAAELKRNDYQLWYNRGNSL 653

Query: 354 YSLR--DAAIAQMKVCERYN 371
           Y+L+  + AIA      RYN
Sbjct: 654 YNLQKYEEAIASYDRAVRYN 673



 Score = 48.9 bits (115), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 67/347 (19%), Positives = 142/347 (40%), Gaps = 40/347 (11%)

Query: 171 ADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQRHFVVHKMIVPGDRERVEQS 230
           A   Y++   +    +Y++AL   +K + + P++  A   +   + K+      +  + +
Sbjct: 371 ATELYKKANTFYELQRYQDALSAFEKAVKIRPDYAEAWNGQGSTLSKL------KEYKAA 424

Query: 231 LKEFRNFVDTHSNVVEACTLFAQVLVDQEDFDGAEEYFNRSIRVDPENASLYVHRAMLML 290
           L  +   +    + +EA      VL + + +  A   F++++++D  +  L+  +   +L
Sbjct: 425 LTAYDRAIQIQPDYLEAWIGRGFVLKNLQRYQEAIASFDKALQLDTNSPQLWTTKGE-VL 483

Query: 291 QARGNVDEAIKLIEKAISIDKSCMFAYETLGTIEVQRGRLEEAVKCFNKALPLARDEAEL 350
            +    DEAI   E+AI++ K    A+           R EEAV+ ++KA+ +    AE 
Sbjct: 484 SSLKRYDEAISAYEQAINLKKDDYTAWYNKALTLQNLKRYEEAVRAYDKAVEIKPSYAE- 542

Query: 351 SHIYSLRDAAIAQMKVCERYNIKKKVSPRSQNITKNEKLAIKQLRENNDIIIRPADKGGK 410
              +  R  A+  +   +RY  +   +   + +  N       L   N            
Sbjct: 543 --AWYNRGNALVNL---QRY--QDAFTAYDKAVQINPTYYQAWLSRGN------------ 583

Query: 411 TVVMDKADYTQKMTSILNSNDYEIIPGDPTKTIEESEKYGNLENESGQKHAASDFTKAFA 470
            +++    Y + + S LN    ++I  +P       + Y     +   +H    + +A A
Sbjct: 584 -ILISLQRYPEAVES-LN----QVIQINP-------QNYQAWYAKGWSQHQMQRYNEALA 630

Query: 471 DLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFH 517
             D+A ++  N    +Y RG       +YEEA+ + D+ +  NP  +
Sbjct: 631 AYDQAAELKRNDYQLWYNRGNSLYNLQKYEEAIASYDRAVRYNPQHY 677



 Score = 45.1 bits (105), Expect = 0.11,   Method: Compositional matrix adjust.
 Identities = 37/216 (17%), Positives = 95/216 (43%), Gaps = 10/216 (4%)

Query: 153 FTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQRH 212
           + +A    D+A ++ P+ A+++Y RG       +Y++A    DK + +NP ++ A   R 
Sbjct: 523 YEEAVRAYDKAVEIKPSYAEAWYNRGNALVNLQRYQDAFTAYDKAVQINPTYYQAWLSRG 582

Query: 213 FVVHKMIVPGDRERVEQSLKEFRNFVDTHSNVVEACTLFAQVLVDQEDFDGAEEYFNRSI 272
            ++  +      +R  ++++     +  +    +A           + ++ A   ++++ 
Sbjct: 583 NILISL------QRYPEAVESLNQVIQINPQNYQAWYAKGWSQHQMQRYNEALAAYDQAA 636

Query: 273 RVDPENASLYVHRAMLMLQARGNVDEAIKLIEKAISIDKSCMFAYETLGTIEVQRGRLEE 332
            +   +  L+ +R   +   +   +EAI   ++A+  +     ++ + G       R +E
Sbjct: 637 ELKRNDYQLWYNRGNSLYNLQ-KYEEAIASYDRAVRYNPQHYESWFSRGNALFNLLRYQE 695

Query: 333 AVKCFNKALPLARDEAELSHIYSLRDAAIAQMKVCE 368
           A+  +N+A+ +  D  +       RD A +Q+ V +
Sbjct: 696 AIASYNQAIKIKPDNQQAIQA---RDKAQSQLSVIK 728



 Score = 43.5 bits (101), Expect = 0.30,   Method: Compositional matrix adjust.
 Identities = 57/284 (20%), Positives = 111/284 (39%), Gaps = 44/284 (15%)

Query: 237 FVDTHSNVVEACTLF--AQVLVDQEDFDGAEEYFNRSIRVDPENASLYVHRAMLMLQARG 294
           ++    N V A  L+  A    + + +  A   F +++++ P+ A  +  +   + + + 
Sbjct: 361 YIINSINSVNATELYKKANTFYELQRYQDALSAFEKAVKIRPDYAEAWNGQGSTLSKLK- 419

Query: 295 NVDEAIKLIEKAISIDKSCMFAYETLGTIEVQRGRLEEAVKCFNKALPLARDEAELSHIY 354
               A+   ++AI I    + A+   G +     R +EA+  F+KAL L  +  +L   +
Sbjct: 420 EYKAALTAYDRAIQIQPDYLEAWIGRGFVLKNLQRYQEAIASFDKALQLDTNSPQL---W 476

Query: 355 SLRDAAIAQMKVCERYNIKKKVSPRSQNITKNEKLAIKQLRENNDIIIRPADKGGKTVVM 414
           + +   ++ +K   RY+  + +S   Q I                              +
Sbjct: 477 TTKGEVLSSLK---RYD--EAISAYEQAIN-----------------------------L 502

Query: 415 DKADYT---QKMTSILNSNDYEIIPGDPTKTIEESEKYGNLENESGQKHA-ASDFTKAFA 470
            K DYT    K  ++ N   YE       K +E    Y       G        +  AF 
Sbjct: 503 KKDDYTAWYNKALTLQNLKRYEEAVRAYDKAVEIKPSYAEAWYNRGNALVNLQRYQDAFT 562

Query: 471 DLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNP 514
             D+A +++P    ++  RG I     +Y EA+ +L++ I +NP
Sbjct: 563 AYDKAVQINPTYYQAWLSRGNILISLQRYPEAVESLNQVIQINP 606


>gi|428317844|ref|YP_007115726.1| serine/threonine protein kinase with TPR repeats [Oscillatoria
           nigro-viridis PCC 7112]
 gi|428241524|gb|AFZ07310.1| serine/threonine protein kinase with TPR repeats [Oscillatoria
           nigro-viridis PCC 7112]
          Length = 710

 Score = 66.2 bits (160), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 44/189 (23%), Positives = 93/189 (49%), Gaps = 7/189 (3%)

Query: 155 KAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQRHFV 214
           +A A  D A K+ P+ A ++  RG +     +YEEA+ + +K +   PN + A   R   
Sbjct: 432 EAIASFDNALKIQPDYAAAWEGRGDVLLDSQRYEEAIASYEKAVQFQPNLYGAWYNRGQA 491

Query: 215 VHKMIVPGDRERVEQSLKEFRNFVDTHSNVVEACTLFAQVLVDQEDFDGAEEYFNRSIRV 274
             K+      ++ +++++ ++  V+   +  EA      V ++      A E + +++R 
Sbjct: 492 HQKL------KQYDRAVESYQKAVEIKFDNYEAWYNLGNVFLELNKNQEAFEAYEKAVRF 545

Query: 275 DPENASLYVHRAMLMLQARGNVDEAIKLIEKAISIDKSCMFAYETLGTIEVQRGRLEEAV 334
            P     +  + + +L+ R + +EA++  EKA+ +      A+  LG    +  + E+A+
Sbjct: 546 QPNFYQGWYSKGIALLKMRRH-EEAVEAYEKAVKLKPDYYQAWYNLGWSYHELRKYEQAI 604

Query: 335 KCFNKALPL 343
           +C+N+AL L
Sbjct: 605 ECYNRALDL 613



 Score = 65.1 bits (157), Expect = 9e-08,   Method: Compositional matrix adjust.
 Identities = 71/377 (18%), Positives = 149/377 (39%), Gaps = 48/377 (12%)

Query: 147 LHAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHV 206
           L+  S F +A A  + A  + P+ A+ + ++ +      +Y+E+    D+ I L P +  
Sbjct: 356 LYNLSRFEEALAAYERAITLRPDYAEVWQEKAKTLYKLKKYQESQAAYDRAIELKPEYLE 415

Query: 207 ARAQRHFVVHKMIVPGDRERVEQSLKEFRNFVDTHSNVVEACTLFAQVLVDQEDFDGAEE 266
           A   R + + K+      ++ ++++  F N +    +   A      VL+D + ++ A  
Sbjct: 416 AWTGRGYALEKL------QQSQEAIASFDNALKIQPDYAAAWEGRGDVLLDSQRYEEAIA 469

Query: 267 YFNRSIRVDPENASLYVHRAMLMLQARGNVDEAIKLIEKAISIDKSCMFAYETLGTIEVQ 326
            + ++++  P     + +R     Q     D A++  +KA+ I      A+  LG + ++
Sbjct: 470 SYEKAVQFQPNLYGAWYNRGQAH-QKLKQYDRAVESYQKAVEIKFDNYEAWYNLGNVFLE 528

Query: 327 RGRLEEAVKCFNKALPLARDEAELSHIYSLRDAAIAQMK----VCERYNIKKKVSPRSQN 382
             + +EA + + KA+   R +      +  +  A+ +M+      E Y    K+ P    
Sbjct: 529 LNKNQEAFEAYEKAV---RFQPNFYQGWYSKGIALLKMRRHEEAVEAYEKAVKLKPDYYQ 585

Query: 383 ITKNEKLAIKQLRENNDIIIRPADKGGKTVVMDKADYTQKMTSILNSNDYEIIPGDPTKT 442
              N   +  +LR+    I                 Y + +   LN  +Y+         
Sbjct: 586 AWYNLGWSYHELRKYEQAI---------------ECYNRALD--LNPKEYQA-------- 620

Query: 443 IEESEKYGNLENESGQKHAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEA 502
                      N    +     +  A    +EA  V P+ ++++Y RG       +YE+A
Sbjct: 621 ---------WYNRGNAQSNLKRYEDALVSYNEAVYVKPDYSEAWYSRGNALVAVKRYEDA 671

Query: 503 LRNLDKTIALNPNFHVA 519
           + + DK I   P++  A
Sbjct: 672 IASYDKAIRYKPDYGAA 688



 Score = 38.9 bits (89), Expect = 6.3,   Method: Compositional matrix adjust.
 Identities = 27/90 (30%), Positives = 44/90 (48%), Gaps = 8/90 (8%)

Query: 441 KTIEESEKYGNLENESGQKHAASDFTK---AFADLDEAEKVDPNVADSYYQRGQIYCLFG 497
           + IE   +Y  LE  +G+ +A     +   A A  D A K+ P+ A ++  RG +     
Sbjct: 405 RAIELKPEY--LEAWTGRGYALEKLQQSQEAIASFDNALKIQPDYAAAWEGRGDVLLDSQ 462

Query: 498 QYEEALRNLDKTIALNPNFHVA---RAQRH 524
           +YEEA+ + +K +   PN + A   R Q H
Sbjct: 463 RYEEAIASYEKAVQFQPNLYGAWYNRGQAH 492


>gi|187250949|ref|YP_001875431.1| putative Zn-dependent protease [Elusimicrobium minutum Pei191]
 gi|186971109|gb|ACC98094.1| Putative Zn-dependent protease [Elusimicrobium minutum Pei191]
          Length = 389

 Score = 66.2 bits (160), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 53/193 (27%), Positives = 88/193 (45%), Gaps = 7/193 (3%)

Query: 154 TKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQRHF 213
           ++A AD  +A K  P     YY R  +Y    +Y  A+ +L K I+L P+F        F
Sbjct: 72  SRATADYTKAIKFAPKDPFKYYSRAVLYIDQKKYLPAIDDLTKAISLKPDF------LDF 125

Query: 214 VVHKMIVPGDRERVEQSLKEFRNFVDTHSNVVEACTLFAQVLVDQEDFDGAEEYFNRSIR 273
            + +  V   R+  + ++K+F  +               +  +   ++D A + F   I 
Sbjct: 126 YLKRGQVYLKRDNFDLAVKDFEKYSSKRKKPNSFYLELGRSYLGNYNYDKAHKQFETFIA 185

Query: 274 VDPENASLYVHRAMLMLQARGNVDEAIKLIEKAISIDKSCMFAYETLGTIEVQRGRLEEA 333
           ++P+N   Y +   +   ARGN DEAI L  KA++ +++   AY   GT+    G  E A
Sbjct: 186 LEPKNHEGYFYLGRVEY-ARGNYDEAISLFSKAVNRNENYAPAYRLRGTVFKDIGDFESA 244

Query: 334 VKCFNKALPLARD 346
           V+ F K + L  D
Sbjct: 245 VEDFTKLIELLPD 257



 Score = 58.2 bits (139), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 62/268 (23%), Positives = 113/268 (42%), Gaps = 42/268 (15%)

Query: 104 RATVYIFTSQSTKAIEDLTQLVEDTSVDPKIKVNAHIKRAVVHLHAASDFTKAFADLDEA 163
           R  VY   ++ ++A  D T+ ++    DP      +  RAV+++     +  A  DL +A
Sbjct: 61  RGDVYKEMNKISRATADYTKAIKFAPKDP----FKYYSRAVLYIDQKK-YLPAIDDLTKA 115

Query: 164 EKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNP---------------NFHVAR 208
             + P+  D Y +RGQ+Y     ++ A+++ +K  +                  N++  +
Sbjct: 116 ISLKPDFLDFYLKRGQVYLKRDNFDLAVKDFEKYSSKRKKPNSFYLELGRSYLGNYNYDK 175

Query: 209 AQRHFVVHKMIVPGDRE------RVE-------QSLKEFRNFVDTHSNVVEACTLFAQVL 255
           A + F     + P + E      RVE       +++  F   V+ + N   A  L   V 
Sbjct: 176 AHKQFETFIALEPKNHEGYFYLGRVEYARGNYDEAISLFSKAVNRNENYAPAYRLRGTVF 235

Query: 256 VDQEDFDGAEEYFNRSIRVDPENASLYVHRAMLMLQARGNVDEAIKLIEKAISIDKSCMF 315
            D  DF+ A E F + I + P+ +  Y +R  L+ +  GN+  A +   K I ++     
Sbjct: 236 KDIGDFESAVEDFTKLIELLPDYS--YYNRRGLVYEELGNLKAAAEDYGKTIELNPKWAV 293

Query: 316 AYETLGTIEVQ-------RGRLEEAVKC 336
           AY   G + ++       R  LE A+K 
Sbjct: 294 AYNNRGFVYLKLKEYALARADLETAIKL 321



 Score = 40.4 bits (93), Expect = 2.3,   Method: Compositional matrix adjust.
 Identities = 79/370 (21%), Positives = 134/370 (36%), Gaps = 85/370 (22%)

Query: 150 ASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARA 209
           A D T+     D A  +  N AD+Y+ RG +Y    +   A  +  K I   P       
Sbjct: 34  AKDNTEKLKYFDRAVLLKNNYADAYHYRGDVYKEMNKISRATADYTKAIKFAPKDPFKYY 93

Query: 210 QRHFVVHKMIVPGDRERVEQSLKEFRNFVDTHSNVVEACTLFAQVLVDQEDFDGAEEYFN 269
            R       ++  D+++   ++ +    +    + ++      QV + +++FD A + F 
Sbjct: 94  SR------AVLYIDQKKYLPAIDDLTKAISLKPDFLDFYLKRGQVYLKRDNFDLAVKDFE 147

Query: 270 R--SIRVDPENASLYVHRAMLMLQARGNVDEAIKLIEKAISIDKSCMFAYETLGTIEVQR 327
           +  S R  P +  L + R+ L      N D+A K  E  I+++      Y  LG +E  R
Sbjct: 148 KYSSKRKKPNSFYLELGRSYL---GNYNYDKAHKQFETFIALEPKNHEGYFYLGRVEYAR 204

Query: 328 GRLEEAVKCFNKALPLARDEAELSHIYSLRDAAIAQMKVCERYNIKKKVSPRSQNITKNE 387
           G  +EA                                          +S  S+ + +NE
Sbjct: 205 GNYDEA------------------------------------------ISLFSKAVNRNE 222

Query: 388 KLAIKQLRENNDIIIRPADKGGKTVVMDKADY---TQKMTSILNSNDYEIIPGDPTKTIE 444
             A             PA +   TV  D  D+    +  T ++     E++P D +    
Sbjct: 223 NYA-------------PAYRLRGTVFKDIGDFESAVEDFTKLI-----ELLP-DYSYYNR 263

Query: 445 ESEKYGNLENESGQKHAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALR 504
               Y  L N    K AA D+ K         +++P  A +Y  RG +Y    +Y  A  
Sbjct: 264 RGLVYEELGN---LKAAAEDYGKTI-------ELNPKWAVAYNNRGFVYLKLKEYALARA 313

Query: 505 NLDKTIALNP 514
           +L+  I L P
Sbjct: 314 DLETAIKLEP 323



 Score = 39.3 bits (90), Expect = 5.4,   Method: Compositional matrix adjust.
 Identities = 64/275 (23%), Positives = 107/275 (38%), Gaps = 27/275 (9%)

Query: 266 EYFNRSIRVDPENASLYVHRAMLMLQARGNVDEAIKLIEKAISIDKSCMFAYETLGTIEV 325
           +YF+R++ +    A  Y +R  +  +    +  A     KAI       F Y +   + +
Sbjct: 42  KYFDRAVLLKNNYADAYHYRGDVY-KEMNKISRATADYTKAIKFAPKDPFKYYSRAVLYI 100

Query: 326 QRGRLEEAVKCFNKALPLARDEAEL----SHIYSLRDAAIAQMKVCERYNIKKKVS---- 377
            + +   A+    KA+ L  D  +       +Y  RD     +K  E+Y+ K+K      
Sbjct: 101 DQKKYLPAIDDLTKAISLKPDFLDFYLKRGQVYLKRDNFDLAVKDFEKYSSKRKKPNSFY 160

Query: 378 ---PRSQNITKNEKLAIKQLRENNDIIIRPADKGGKTVVMDKADYTQKMTSILNSNDYEI 434
               RS     N   A KQ      I + P +  G    + + +Y +         +Y+ 
Sbjct: 161 LELGRSYLGNYNYDKAHKQFE--TFIALEPKNHEG-YFYLGRVEYAR--------GNYDE 209

Query: 435 IPGDPTKTIEESEKYGNLENESGQKHA-ASDFTKAFADLDEAEKVDPNVADSYY-QRGQI 492
                +K +  +E Y       G       DF  A  D  +  ++ P+   SYY +RG +
Sbjct: 210 AISLFSKAVNRNENYAPAYRLRGTVFKDIGDFESAVEDFTKLIELLPDY--SYYNRRGLV 267

Query: 493 YCLFGQYEEALRNLDKTIALNPNFHVARAQRHFVW 527
           Y   G  + A  +  KTI LNP + VA   R FV+
Sbjct: 268 YEELGNLKAAAEDYGKTIELNPKWAVAYNNRGFVY 302


>gi|194335759|ref|YP_002017553.1| hypothetical protein Ppha_0637 [Pelodictyon phaeoclathratiforme BU-1]
 gi|194308236|gb|ACF42936.1| TPR repeat-containing protein [Pelodictyon phaeoclathratiforme BU-1]
          Length = 4489

 Score = 66.2 bits (160), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 82/367 (22%), Positives = 152/367 (41%), Gaps = 44/367 (11%)

Query: 152  DFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQR 211
            +F +A    D+A K++P  A  +  RG       +Y+EAL+  D  +    ++  A   R
Sbjct: 3713 NFPEAEELFDQALKINPAHATVWNNRGIALQELKRYDEALQCYDNALERKADYAAAFFYR 3772

Query: 212  HFVVHKMIVPGDRERVEQSLKEFRNFVDTHSNVVEACTLFAQVLVDQEDFDGAEEYFNRS 271
              V+ K+       R ++++  +   +    +   AC      L     +D A   +++ 
Sbjct: 3773 GLVLTKL------HRYDEAVLSYNRALILKPDYAAACYNLGNTLQKLNRYDEALVCYDKV 3826

Query: 272  IRVDPENASLYVHRAMLMLQARGNVDEAIKLIEKAISIDKSCMFAYETLGTIEVQRGRLE 331
            + + P +A    +R  + L+     DEA+   EKA+++      AY  LG +     R  
Sbjct: 3827 LVIKPGDAEACSNRG-ITLKELQRYDEAVLSYEKALALRPDYADAYYNLGNVLQDLKRYR 3885

Query: 332  EAVKCFNKALPLARDEAELSHIYSLRDAAIAQMKVCERYNIKKKVSPRSQNITKNEKLAI 391
            EA+  ++K L +   +A   H+YS R  A+ ++K   RY+           ++  + LA+
Sbjct: 3886 EALDNYDKVLAIRPGDA---HVYSNRGIALQELK---RYD--------EALVSYEKALAL 3931

Query: 392  KQLRENNDIIIRPADKGGKTVVMDKADYTQKMTSILNSNDYEIIPGDPTKTIEE--SEKY 449
            K      D     +++G              +   LN ND  ++  +    I++  +E Y
Sbjct: 3932 KP-----DYAKAYSNRGS-------------VLQALNRNDEALLSYERAIAIKQDYAEAY 3973

Query: 450  GNLENESGQKHAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKT 509
                N          + +A    + A    P+ AD Y+  G       +Y+EAL N DKT
Sbjct: 3974 ---RNRGVVLKELKRYDEALLSYERAIAFKPDSADGYFNLGIALRELKRYDEALINFDKT 4030

Query: 510  IALNPNF 516
            + +NP +
Sbjct: 4031 LFINPGY 4037



 Score = 61.6 bits (148), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 54/218 (24%), Positives = 104/218 (47%), Gaps = 22/218 (10%)

Query: 153 FTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQRH 212
           F +A A  + A +++   A+S    G + C   +Y +A+ + DK IALNP++  A     
Sbjct: 82  FHEAIALFERAFEINSEHANSLNNYGIVLCEVKRYNDAVLSFDKAIALNPDYGEAAL--- 138

Query: 213 FVVHKMIVPGDRERVEQSLKEFRNFVDT-----HSNVVEACTLFAQVLVDQEDFDGAEEY 267
                     +RE V + LK +   V +       N    C+ +  VL +   ++ +  Y
Sbjct: 139 ----------NREAVLKILKRYDEVVLSCGLAFKGNNAAVCSDYGNVLQELSRYEESLLY 188

Query: 268 FNRSIRVDPENASLYVHRAMLMLQARGNVDEAIKLIEKAISIDKSCMFAYETLGTIEVQR 327
           ++R++ ++P+  + Y +R  L L+     DEA+   +KAI+++     A+   G    + 
Sbjct: 189 YDRALALEPDYVAAYFNRG-LALKKLKRYDEAVLSYDKAIALEPDYAEAHSNRGNALTEL 247

Query: 328 GRLEEAVKCFNKALPLARDEAELSHIYSLRDAAIAQMK 365
            R  +AV  +++AL L  D A+    ++ R  A+ ++K
Sbjct: 248 KRYHDAVLSYDRALALKPDYAK---AHANRGVALQELK 282



 Score = 58.2 bits (139), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 66/309 (21%), Positives = 135/309 (43%), Gaps = 32/309 (10%)

Query: 234  FRNFVDTHSNVVEACTLFAQVLVDQEDFDGAEEYFNRSIRVDPENASLYVHRAMLMLQAR 293
            +R  +  +    +A  L A V   +++F  AEE F+++++++P +A+++ +R  + LQ  
Sbjct: 3687 YREILRANPEHFDALRLLATVAAQRKNFPEAEELFDQALKINPAHATVWNNRG-IALQEL 3745

Query: 294  GNVDEAIKLIEKAISIDKSCMFAYETLGTIEVQRGRLEEAVKCFNKALPLARDEAELSHI 353
               DEA++  + A+        A+   G +  +  R +EAV  +N+AL L  D A  +  
Sbjct: 3746 KRYDEALQCYDNALERKADYAAAFFYRGLVLTKLHRYDEAVLSYNRALILKPDYA--AAC 3803

Query: 354  YSLRDAA-----IAQMKVCERYNIKKKVSPRSQNITKNEKLAIKQLRENNDIIIRPADKG 408
            Y+L +         +  VC  Y+    + P       N  + +K+L+  ++ ++  + + 
Sbjct: 3804 YNLGNTLQKLNRYDEALVC--YDKVLVIKPGDAEACSNRGITLKELQRYDEAVL--SYEK 3859

Query: 409  GKTVVMDKADYTQKMTSILNSNDYEIIPGDPTKTIEESEKYGN-LENESGQKHAASD--- 464
               +  D AD    + ++L          D  +  E  + Y   L    G  H  S+   
Sbjct: 3860 ALALRPDYADAYYNLGNVLQ---------DLKRYREALDNYDKVLAIRPGDAHVYSNRGI 3910

Query: 465  -------FTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFH 517
                   + +A    ++A  + P+ A +Y  RG +     + +EAL + ++ IA+  ++ 
Sbjct: 3911 ALQELKRYDEALVSYEKALALKPDYAKAYSNRGSVLQALNRNDEALLSYERAIAIKQDYA 3970

Query: 518  VARAQRHFV 526
             A   R  V
Sbjct: 3971 EAYRNRGVV 3979



 Score = 56.6 bits (135), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 54/236 (22%), Positives = 104/236 (44%), Gaps = 12/236 (5%)

Query: 153  FTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQRH 212
            + +A    ++A  + P+ AD+YY  G +     +Y EAL N DK +A+ P         H
Sbjct: 3850 YDEAVLSYEKALALRPDYADAYYNLGNVLQDLKRYREALDNYDKVLAIRP------GDAH 3903

Query: 213  FVVHKMIVPGDRERVEQSLKEFRNFVDTHSNVVEACTLFAQVLVDQEDFDGAEEYFNRSI 272
               ++ I   + +R +++L  +   +    +  +A +    VL      D A   + R+I
Sbjct: 3904 VYSNRGIALQELKRYDEALVSYEKALALKPDYAKAYSNRGSVLQALNRNDEALLSYERAI 3963

Query: 273  RVDPENASLYVHRAMLMLQARGNVDEAIKLIEKAISIDKSCMFAYETLGTIEVQRGRLEE 332
             +  + A  Y +R +++ + +   DEA+   E+AI+        Y  LG    +  R +E
Sbjct: 3964 AIKQDYAEAYRNRGVVLKELK-RYDEALLSYERAIAFKPDSADGYFNLGIALRELKRYDE 4022

Query: 333  AVKCFNKALPLARDEAELSHIYSLRDAAIAQMKVCERYNIKKKVSPRSQNITKNEK 388
            A+  F+K L +         ++ +R      M +C+    K  VS   + + ++EK
Sbjct: 4023 ALINFDKTLFI---NPGYEFLFGVR--LYTMMHICDWSTFKHHVSQLREKLERHEK 4073



 Score = 51.6 bits (122), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 61/290 (21%), Positives = 125/290 (43%), Gaps = 36/290 (12%)

Query: 145  VHLHAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNF 204
            + L     + +A    D A +   + A +++ RG +     +Y+EA+ + ++ + L P++
Sbjct: 3740 IALQELKRYDEALQCYDNALERKADYAAAFFYRGLVLTKLHRYDEAVLSYNRALILKPDY 3799

Query: 205  HVA------------RAQRHFVVHK---MIVPGDRERVEQ---SLKEFRNFVDTHSNVVE 246
              A            R     V +    +I PGD E       +LKE + + +   +  +
Sbjct: 3800 AAACYNLGNTLQKLNRYDEALVCYDKVLVIKPGDAEACSNRGITLKELQRYDEAVLSYEK 3859

Query: 247  ACTL----------FAQVLVDQEDFDGAEEYFNRSIRVDPENASLYVHRAMLMLQARGNV 296
            A  L             VL D + +  A + +++ + + P +A +Y +R  + LQ     
Sbjct: 3860 ALALRPDYADAYYNLGNVLQDLKRYREALDNYDKVLAIRPGDAHVYSNRG-IALQELKRY 3918

Query: 297  DEAIKLIEKAISIDKSCMFAYETLGTIEVQRGRLEEAVKCFNKALPLARDEAELSHIYSL 356
            DEA+   EKA+++      AY   G++     R +EA+  + +A+ + +D AE    Y  
Sbjct: 3919 DEALVSYEKALALKPDYAKAYSNRGSVLQALNRNDEALLSYERAIAIKQDYAE---AYRN 3975

Query: 357  RDAAIAQMKVCER----YNIKKKVSPRSQNITKNEKLAIKQLRENNDIII 402
            R   + ++K  +     Y       P S +   N  +A+++L+  ++ +I
Sbjct: 3976 RGVVLKELKRYDEALLSYERAIAFKPDSADGYFNLGIALRELKRYDEALI 4025



 Score = 50.4 bits (119), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 53/245 (21%), Positives = 106/245 (43%), Gaps = 12/245 (4%)

Query: 147  LHAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHV 206
            L A   +  A +  + A  + P+ A++ Y R        ++EEAL   +K I + P++  
Sbjct: 2981 LIALKRYGDALSSYERAFLLKPDYAEACYNRALALQELERHEEALSGYEKAIGIKPDYVE 3040

Query: 207  ARAQRHFVVHKMIVPGDRERVEQSLKEFRNFVDTHSNVVEACTLFAQVLVDQEDFDGAEE 266
            A  +R   + ++      +R + +L  +   +    +  +A       L + + +D A  
Sbjct: 3041 ALYKRGVALKRL------QRYDDALLCYDKVIALKPDYADAHYSRGLALQELQRYDEALS 3094

Query: 267  YFNRSIRVDPENASLYVHRAMLMLQARGNVDEAIKLIEKAISIDKSCMFAYETLGTIEVQ 326
             +  +I  +P+ A  YV+R   +   +   D A+   ++AI++      AY   G I+ +
Sbjct: 3095 NYGEAIARNPQFAEAYVNRGNALTDLKRYQD-ALLDYDRAIAVKLDYAIAYFNRGVIQQK 3153

Query: 327  RGRLEEAVKCFNKALPLARDEAELSHIYSLRDAAIAQMKVCERYNIKKKVSPRSQNITKN 386
                E+AV  ++ A      E     +Y LR    A+M++C+       V    + I + 
Sbjct: 3154 LKLYEDAVLSYDNAYTF---EPTFDFLYGLR--LYARMQICDWSIFYNNVRELREKIGRC 3208

Query: 387  EKLAI 391
            EK++I
Sbjct: 3209 EKVSI 3213



 Score = 50.1 bits (118), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 62/277 (22%), Positives = 107/277 (38%), Gaps = 57/277 (20%)

Query: 275 DPENASLYVHRAMLMLQARGNVDEAIKLIEKAISIDKSCMFAYETLGTIEVQRGRLEEAV 334
           DP +A +   +A L    +G +DEA  +  + +  +     A+  L  I  QR +  EA+
Sbjct: 27  DPSDAPVARLQAALTFHQQGRLDEAEAVYREILVTEPDQFDAFRLLAIIAAQRKQFHEAI 86

Query: 335 KCFNKALPLARDEAELSHIYSLRDAAIAQMKVCERYN-----IKKKVS--PRSQNITKNE 387
             F +A      E    H  SL +  I   +V +RYN       K ++  P       N 
Sbjct: 87  ALFERAF-----EINSEHANSLNNYGIVLCEV-KRYNDAVLSFDKAIALNPDYGEAALNR 140

Query: 388 KLAIKQLRENNDIIIRP--ADKGGKTVVMDKADYTQKMTSILNSNDYEIIPGDPTKTIEE 445
           +  +K L+  +++++    A KG    V                                
Sbjct: 141 EAVLKILKRYDEVVLSCGLAFKGNNAAV-------------------------------- 168

Query: 446 SEKYGNLENESGQKHAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRN 505
              YGN+  E       S + ++    D A  ++P+   +Y+ RG       +Y+EA+ +
Sbjct: 169 CSDYGNVLQE------LSRYEESLLYYDRALALEPDYVAAYFNRGLALKKLKRYDEAVLS 222

Query: 506 LDKTIALNPNFHVARAQRHFVWTSTLAELMAFSDEFM 542
            DK IAL P++  A + R     + L EL  + D  +
Sbjct: 223 YDKAIALEPDYAEAHSNR----GNALTELKRYHDAVL 255



 Score = 50.1 bits (118), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 58/274 (21%), Positives = 115/274 (41%), Gaps = 48/274 (17%)

Query: 153  FTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQRH 212
            + +A    D A +++P   ++YY RG       +Y+EAL + D  IAL P++      R 
Sbjct: 872  YDEALHCFDRATELNPYYVEAYYNRGITLKELQRYDEALLSYDAVIALKPDYPEVYVNRG 931

Query: 213  FVVHKMIVPGDRERVEQSLKEFRNFVDTHSNVVEACTLFAQVLVDQ--EDFDGAEEYFNR 270
             V+ +++      R +++L  + + +    +  +A   F Q L  Q  + ++ A   +++
Sbjct: 932  NVLKELL------RCDEALLSYNSALVLKPDYTQA--YFNQALALQHLKQYEEAVLSYDK 983

Query: 271  SIRVDPENASLYVHRAMLMLQA--------------------------RGNV-------D 297
            +I ++PE  + Y +R   + +                           RGN         
Sbjct: 984  AILLNPEYVAAYSNRGSALKELKRYDEALSNYGEAIARNPQFAEAYVNRGNALTDLKRYQ 1043

Query: 298  EAIKLIEKAISIDKSCMFAYETLGTIEVQRGRLEEAVKCFNKALPLARDEAELSHIYSLR 357
            +A+   ++AI++      AY   G I+ +    E+AV  ++ A      E     +Y LR
Sbjct: 1044 DALLDYDRAIAVKLDYAIAYFNRGVIQQKLKLYEDAVLSYDNAYTF---EPTFDFLYGLR 1100

Query: 358  DAAIAQMKVCERYNIKKKVSPRSQNITKNEKLAI 391
                A+M++C+       V    + I + EK++I
Sbjct: 1101 --LYARMQICDWSIFYNNVRELREKIGRCEKVSI 1132



 Score = 47.4 bits (111), Expect = 0.018,   Method: Compositional matrix adjust.
 Identities = 61/322 (18%), Positives = 133/322 (41%), Gaps = 26/322 (8%)

Query: 205  HVARAQRHFVVHKMIVPGDRERVEQSLKEFRNFVDTHSNVVEACTLFAQVLVDQEDFDGA 264
            H +R      +H+      + R+ ++   +R  +  +    +A  L A V   + +F  A
Sbjct: 788  HASRFPEALTLHQ------QGRINEAEALYREILCANPKHFDALQLLATVAAQKRNFSEA 841

Query: 265  EEYFNRSIRVDPENASLYVHRAMLMLQARGNVDEAIKLIEKAISIDKSCMFAYETLGTIE 324
               F ++  ++ +   L ++     L+     DEA+   ++A  ++   + AY   G   
Sbjct: 842  AALFEQAFAINSDCPEL-LNNWGNTLKELKRYDEALHCFDRATELNPYYVEAYYNRGITL 900

Query: 325  VQRGRLEEAVKCFNKALPLARDEAELSHIYSLRDAAIAQMKVCER----YNIKKKVSPRS 380
             +  R +EA+  ++  + L  D  E   +Y  R   + ++  C+     YN    + P  
Sbjct: 901  KELQRYDEALLSYDAVIALKPDYPE---VYVNRGNVLKELLRCDEALLSYNSALVLKPDY 957

Query: 381  QNITKNEKLAIKQLRENNDIIIRPADKGGKTVVMDK---ADYTQKMTSILNSNDYEIIPG 437
                 N+ LA++ L++  + ++       K ++++    A Y+ + +++     Y+    
Sbjct: 958  TQAYFNQALALQHLKQYEEAVL----SYDKAILLNPEYVAAYSNRGSALKELKRYDEALS 1013

Query: 438  DPTKTIEESEKYGNLENESGQKHAASDFTK---AFADLDEAEKVDPNVADSYYQRGQIYC 494
            +  + I  + ++   E    + +A +D  +   A  D D A  V  + A +Y+ RG I  
Sbjct: 1014 NYGEAIARNPQFA--EAYVNRGNALTDLKRYQDALLDYDRAIAVKLDYAIAYFNRGVIQQ 1071

Query: 495  LFGQYEEALRNLDKTIALNPNF 516
                YE+A+ + D      P F
Sbjct: 1072 KLKLYEDAVLSYDNAYTFEPTF 1093



 Score = 47.4 bits (111), Expect = 0.019,   Method: Compositional matrix adjust.
 Identities = 64/297 (21%), Positives = 121/297 (40%), Gaps = 23/297 (7%)

Query: 239  DTHSNVVEACTLFAQVLVDQEDFDGAEEYFNRSIRVDPENASLYVHRAMLMLQARGNVDE 298
            D  S   EA TL  Q  +++     AE  +   +  +P++       A +  Q R N  E
Sbjct: 787  DHASRFPEALTLHQQGRINE-----AEALYREILCANPKHFDALQLLATVAAQKR-NFSE 840

Query: 299  AIKLIEKAISIDKSCMFAYETLGTIEVQRGRLEEAVKCFNKALPLARDEAELSHIYSLRD 358
            A  L E+A +I+  C       G    +  R +EA+ CF++A  L     E    Y  R 
Sbjct: 841  AAALFEQAFAINSDCPELLNNWGNTLKELKRYDEALHCFDRATELNPYYVE---AYYNRG 897

Query: 359  AAIAQMKVCER----YNIKKKVSPRSQNITKNEKLAIKQLRENNDIIIRPADKGGKTVVM 414
              + +++  +     Y+    + P    +  N    +K+L   ++ ++        + ++
Sbjct: 898  ITLKELQRYDEALLSYDAVIALKPDYPEVYVNRGNVLKELLRCDEALL-----SYNSALV 952

Query: 415  DKADYTQ----KMTSILNSNDYEIIPGDPTKTIEESEKY-GNLENESGQKHAASDFTKAF 469
             K DYTQ    +  ++ +   YE       K I  + +Y     N          + +A 
Sbjct: 953  LKPDYTQAYFNQALALQHLKQYEEAVLSYDKAILLNPEYVAAYSNRGSALKELKRYDEAL 1012

Query: 470  ADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQRHFV 526
            ++  EA   +P  A++Y  RG       +Y++AL + D+ IA+  ++ +A   R  +
Sbjct: 1013 SNYGEAIARNPQFAEAYVNRGNALTDLKRYQDALLDYDRAIAVKLDYAIAYFNRGVI 1069



 Score = 45.8 bits (107), Expect = 0.057,   Method: Compositional matrix adjust.
 Identities = 63/267 (23%), Positives = 105/267 (39%), Gaps = 40/267 (14%)

Query: 252  AQVLVDQEDFDGAEEYFNRSIRVDPENASLYVHRAMLMLQARGNVDEAIKLIEKAISIDK 311
            A  L  Q   D AE  +   +R +PE+       A +  Q R N  EA +L ++A+ I+ 
Sbjct: 3671 ALALHQQGCLDDAEVLYREILRANPEHFDALRLLATVAAQ-RKNFPEAEELFDQALKINP 3729

Query: 312  SCMFAYETLGTIEVQRGRLEEAVKCFNKALPLARDEAELSHIYSLRDAAIAQMKVCERYN 371
            +    +   G    +  R +EA++C++ AL    D A  +  Y                 
Sbjct: 3730 AHATVWNNRGIALQELKRYDEALQCYDNALERKADYAA-AFFY----------------- 3771

Query: 372  IKKKVSPRSQNITKNEKLAIKQLRENNDIIIRPADKGGKTVVMDKADYTQKMTSILNSND 431
                   R   +TK  +     L  N  +I++P          +  +  QK    LN  D
Sbjct: 3772 -------RGLVLTKLHRYDEAVLSYNRALILKP---DYAAACYNLGNTLQK----LNRYD 3817

Query: 432  YEIIPGDPTKTIEESEKYGNLENESGQKHAASD---FTKAFADLDEAEKVDPNVADSYYQ 488
              ++  D    I    K G+ E  S +     +   + +A    ++A  + P+ AD+YY 
Sbjct: 3818 EALVCYDKVLVI----KPGDAEACSNRGITLKELQRYDEAVLSYEKALALRPDYADAYYN 3873

Query: 489  RGQIYCLFGQYEEALRNLDKTIALNPN 515
             G +     +Y EAL N DK +A+ P 
Sbjct: 3874 LGNVLQDLKRYREALDNYDKVLAIRPG 3900



 Score = 44.3 bits (103), Expect = 0.17,   Method: Compositional matrix adjust.
 Identities = 44/197 (22%), Positives = 84/197 (42%), Gaps = 7/197 (3%)

Query: 152  DFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQR 211
            +F +A    D A  + P+   +   RG       +Y +AL + ++   L P++  A   R
Sbjct: 2952 NFHEALELFDHALAIKPDHPITLNNRGNTLIALKRYGDALSSYERAFLLKPDYAEACYNR 3011

Query: 212  HFVVHKMIVPGDRERVEQSLKEFRNFVDTHSNVVEACTLFAQVLVDQEDFDGAEEYFNRS 271
               + ++      ER E++L  +   +    + VEA       L   + +D A   +++ 
Sbjct: 3012 ALALQEL------ERHEEALSGYEKAIGIKPDYVEALYKRGVALKRLQRYDDALLCYDKV 3065

Query: 272  IRVDPENASLYVHRAMLMLQARGNVDEAIKLIEKAISIDKSCMFAYETLGTIEVQRGRLE 331
            I + P+ A  +  R  L LQ     DEA+    +AI+ +     AY   G       R +
Sbjct: 3066 IALKPDYADAHYSRG-LALQELQRYDEALSNYGEAIARNPQFAEAYVNRGNALTDLKRYQ 3124

Query: 332  EAVKCFNKALPLARDEA 348
            +A+  +++A+ +  D A
Sbjct: 3125 DALLDYDRAIAVKLDYA 3141



 Score = 42.4 bits (98), Expect = 0.71,   Method: Compositional matrix adjust.
 Identities = 47/214 (21%), Positives = 96/214 (44%), Gaps = 10/214 (4%)

Query: 152  DFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQR 211
            +F++A A  ++A  ++ +  +     G       +Y+EAL   D+   LNP +  A   R
Sbjct: 837  NFSEAAALFEQAFAINSDCPELLNNWGNTLKELKRYDEALHCFDRATELNPYYVEAYYNR 896

Query: 212  HFVVHKMIVPGDRERVEQSLKEFRNFVDTHSNVVEACTLFAQVLVDQEDFDGAEEYFNRS 271
               + ++      +R +++L  +   +    +  E       VL +    D A   +N +
Sbjct: 897  GITLKEL------QRYDEALLSYDAVIALKPDYPEVYVNRGNVLKELLRCDEALLSYNSA 950

Query: 272  IRVDPENASLYVHRAMLMLQARGNVDEAIKLIEKAISIDKSCMFAYETLGTIEVQRGRLE 331
            + + P+    Y ++A L LQ     +EA+   +KAI ++   + AY   G+   +  R +
Sbjct: 951  LVLKPDYTQAYFNQA-LALQHLKQYEEAVLSYDKAILLNPEYVAAYSNRGSALKELKRYD 1009

Query: 332  EAVKCFNKALPLARDEAELSHIYSLRDAAIAQMK 365
            EA+  + +A  +AR+  + +  Y  R  A+  +K
Sbjct: 1010 EALSNYGEA--IARN-PQFAEAYVNRGNALTDLK 1040



 Score = 41.2 bits (95), Expect = 1.3,   Method: Compositional matrix adjust.
 Identities = 53/255 (20%), Positives = 102/255 (40%), Gaps = 25/255 (9%)

Query: 285  RAMLMLQARGNVDEAIKLIEKAISIDKSCMFAYETLGTIEVQRGRLEEAVKCFNKALPLA 344
            ++ L L  +G +D+A  L  + +  +     A + L T+  Q+    EA++ F+ AL + 
Sbjct: 2908 QSALALHQQGCLDDAEVLYREVVHSNPDYFEAVQLLATVAAQKQNFHEALELFDHALAIK 2967

Query: 345  RDEAELSHIYSL--RDAAIAQMK----VCERYNIKKKVSPRSQNITKNEKLAIKQLRENN 398
             D     H  +L  R   +  +K        Y     + P       N  LA+++L  + 
Sbjct: 2968 PD-----HPITLNNRGNTLIALKRYGDALSSYERAFLLKPDYAEACYNRALALQELERHE 3022

Query: 399  DIIIRPADKGGKTVVMDKADYTQKM------TSILNSNDYEIIPGDPTKTIEESEKYGNL 452
            + +      G +  +  K DY + +         L   D  ++  D  K I     Y + 
Sbjct: 3023 EAL-----SGYEKAIGIKPDYVEALYKRGVALKRLQRYDDALLCYD--KVIALKPDYADA 3075

Query: 453  ENESGQK-HAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIA 511
                G        + +A ++  EA   +P  A++Y  RG       +Y++AL + D+ IA
Sbjct: 3076 HYSRGLALQELQRYDEALSNYGEAIARNPQFAEAYVNRGNALTDLKRYQDALLDYDRAIA 3135

Query: 512  LNPNFHVARAQRHFV 526
            +  ++ +A   R  +
Sbjct: 3136 VKLDYAIAYFNRGVI 3150



 Score = 40.4 bits (93), Expect = 2.4,   Method: Compositional matrix adjust.
 Identities = 73/302 (24%), Positives = 116/302 (38%), Gaps = 72/302 (23%)

Query: 234  FRNFVDTHSNVVEACTLFAQVLVDQEDFDGAEEYFNRSIRVDPENASLYVHRAMLMLQAR 293
            +R  V ++ +  EA  L A V   +++F  A E F+ ++ + P++         + L  R
Sbjct: 2926 YREVVHSNPDYFEAVQLLATVAAQKQNFHEALELFDHALAIKPDHP--------ITLNNR 2977

Query: 294  GNVDEAIKLIEKAISIDKSCMFAYETLGTIEVQRGRLEEAVKCFNKALPLA---RDEAEL 350
            GN   A+K    A+S       +YE    +     + + A  C+N+AL L    R E  L
Sbjct: 2978 GNTLIALKRYGDALS-------SYERAFLL-----KPDYAEACYNRALALQELERHEEAL 3025

Query: 351  SHIYSLRDAAIAQMKVCERYNIKKKVSPRSQNITKNEKLAIKQLRENNDIIIRPADKGGK 410
            S                  Y     + P          +A+K+L+  +D ++   DK   
Sbjct: 3026 SG-----------------YEKAIGIKPDYVEALYKRGVALKRLQRYDDALL-CYDK--- 3064

Query: 411  TVVMDKADYT-------------QKMTSILNSNDYEIIPGDPTKTIEESEKYGNLENESG 457
             V+  K DY              Q+    L SN  E I  +P    + +E Y N  N   
Sbjct: 3065 -VIALKPDYADAHYSRGLALQELQRYDEAL-SNYGEAIARNP----QFAEAYVNRGN--- 3115

Query: 458  QKHAASDFTK---AFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNP 514
               A +D  +   A  D D A  V  + A +Y+ RG I      YE+A+ + D      P
Sbjct: 3116 ---ALTDLKRYQDALLDYDRAIAVKLDYAIAYFNRGVIQQKLKLYEDAVLSYDNAYTFEP 3172

Query: 515  NF 516
             F
Sbjct: 3173 TF 3174


>gi|67921673|ref|ZP_00515191.1| TPR repeat:TPR repeat [Crocosphaera watsonii WH 8501]
 gi|67856785|gb|EAM52026.1| TPR repeat:TPR repeat [Crocosphaera watsonii WH 8501]
          Length = 226

 Score = 66.2 bits (160), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 46/156 (29%), Positives = 76/156 (48%), Gaps = 7/156 (4%)

Query: 151 SDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQ 210
            D   A  D ++A + +P  +D+Y  RG  Y L  Q EEA++N ++ I L+P        
Sbjct: 53  GDLKAALEDYNQAIEANPQNSDAYSNRGNAYFLLKQPEEAMKNYNQAIKLDPELSRPYYN 112

Query: 211 RHFVVHKMIVPGDRERVEQSLKEFRNFVDTHSNVVEACTLFAQVLVDQEDFDGAEEYFNR 270
           R F+  +   P      E ++K++   +  + + + A    A VL    D  GA E +N+
Sbjct: 113 RGFLYQREGKP------ELAVKDYNKTISLNPDYIPAYLNRAVVLSILGDNQGAIEDYNK 166

Query: 271 SIRVDPENASLYVHRAMLMLQARGNVDEAIKLIEKA 306
            I  DP    LY +RA    +  GN ++A++ +EKA
Sbjct: 167 VIETDPNLPQLYFNRAASYSEL-GNPEKAMEDLEKA 201



 Score = 46.2 bits (108), Expect = 0.044,   Method: Compositional matrix adjust.
 Identities = 22/70 (31%), Positives = 36/70 (51%)

Query: 458 QKHAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFH 517
           +K    D   A  D ++A + +P  +D+Y  RG  Y L  Q EEA++N ++ I L+P   
Sbjct: 48  EKVKKGDLKAALEDYNQAIEANPQNSDAYSNRGNAYFLLKQPEEAMKNYNQAIKLDPELS 107

Query: 518 VARAQRHFVW 527
                R F++
Sbjct: 108 RPYYNRGFLY 117



 Score = 45.4 bits (106), Expect = 0.082,   Method: Compositional matrix adjust.
 Identities = 22/61 (36%), Positives = 38/61 (62%)

Query: 468 AFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQRHFVW 527
           A  + ++A K+DP ++  YY RG +Y   G+ E A+++ +KTI+LNP++  A   R  V 
Sbjct: 92  AMKNYNQAIKLDPELSRPYYNRGFLYQREGKPELAVKDYNKTISLNPDYIPAYLNRAVVL 151

Query: 528 T 528
           +
Sbjct: 152 S 152



 Score = 43.1 bits (100), Expect = 0.35,   Method: Compositional matrix adjust.
 Identities = 32/111 (28%), Positives = 56/111 (50%), Gaps = 7/111 (6%)

Query: 240 THSNVVEACTLFAQVL--VDQEDFDGAEEYFNRSIRVDPENASLYVHR--AMLMLQARGN 295
              ++ ++  L+ Q L  V + D   A E +N++I  +P+N+  Y +R  A  +L+    
Sbjct: 32  AEGDIKKSEVLYQQALEKVKKGDLKAALEDYNQAIEANPQNSDAYSNRGNAYFLLK---Q 88

Query: 296 VDEAIKLIEKAISIDKSCMFAYETLGTIEVQRGRLEEAVKCFNKALPLARD 346
            +EA+K   +AI +D      Y   G +  + G+ E AVK +NK + L  D
Sbjct: 89  PEEAMKNYNQAIKLDPELSRPYYNRGFLYQREGKPELAVKDYNKTISLNPD 139


>gi|434387356|ref|YP_007097967.1| Tfp pilus assembly protein PilF [Chamaesiphon minutus PCC 6605]
 gi|428018346|gb|AFY94440.1| Tfp pilus assembly protein PilF [Chamaesiphon minutus PCC 6605]
          Length = 607

 Score = 66.2 bits (160), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 85/359 (23%), Positives = 145/359 (40%), Gaps = 53/359 (14%)

Query: 1   MFMDRG---AQHAKEEISKRSFFKPSKQFIKTYLK-SFPNDPILQPDGLSNGVELTNGDT 56
           +  DRG   A H + +I +      +  F+KT      P +  +Q  G S GV++  G T
Sbjct: 180 VLNDRGELIAVHGRGDIQENKATANANVFVKTGFNLGIPANTFVQIAG-SMGVKI-GGKT 237

Query: 57  --------NESHELDLLSKAKRAFEHEDYLTAIRHCTEEIESTSSNHTKALARLLRATVY 108
                     +   D    A   F   DY  AI+     I +T  N+T A   + RA   
Sbjct: 238 APVIATQPRTTTADDFFVTAATKFRQGDYPGAIQGFDRAI-ATKPNYTAAY--IARAEAN 294

Query: 109 IFTSQSTKAIEDLTQLVEDTSVDPKIKVNAHIKRAVVHLHAASDFTKAFADLDEAEKVDP 168
           ++     + I D  + +   +++P+   +A+  R    +    D   AFADLD A  ++P
Sbjct: 295 LYLDNEEEVIRDANRAL---NLNPRSD-DAYALRGGGKI-GIGDAKGAFADLDRAIALNP 349

Query: 169 NVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQRHFVVHKMIVPGDRE--- 225
                Y+ RG     +G   +AL+++DK +A++PN   A A R    + +  P   E   
Sbjct: 350 RNPRGYFYRGFGQMQYGDPTQALQSIDKALAIDPNLSDAYAVRAVAKYLLGEPQAAESDF 409

Query: 226 --------------------RVEQSLKEFRNFVDTHSNV------VEACTLFAQVLVDQE 259
                               RV    KE   F D    +          +L  Q   +  
Sbjct: 410 ARALQINANNFLAYVYRGFIRVVAGKKE-TGFADLQKAIAISPKNAIGYSLRGQAYANTG 468

Query: 260 DFDGAEEYFNRSIRVDPENASLYVHRAMLMLQARGNVDEAIKLIEKAISIDKSCMFAYE 318
           D+  A   +NR++++ P   S Y +R +  +Q + N  + +  +EKA+ ++ S   AY+
Sbjct: 469 DYARAISEYNRALQIKPNYGSAYANRGVAHMQQQ-NFKQGLADVEKALKLNPSNETAYQ 526



 Score = 47.0 bits (110), Expect = 0.025,   Method: Compositional matrix adjust.
 Identities = 30/86 (34%), Positives = 42/86 (48%), Gaps = 1/86 (1%)

Query: 456 SGQKHAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPN 515
            G K    D   AFADLD A  ++P     Y+ RG     +G   +AL+++DK +A++PN
Sbjct: 325 GGGKIGIGDAKGAFADLDRAIALNPRNPRGYFYRGFGQMQYGDPTQALQSIDKALAIDPN 384

Query: 516 FHVARAQRHFVWTSTLAELMAFSDEF 541
              A A R  V    L E  A   +F
Sbjct: 385 LSDAYAVRA-VAKYLLGEPQAAESDF 409



 Score = 41.2 bits (95), Expect = 1.3,   Method: Compositional matrix adjust.
 Identities = 20/56 (35%), Positives = 28/56 (50%)

Query: 468 AFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQR 523
            FADL +A  + P  A  Y  RGQ Y   G Y  A+   ++ + + PN+  A A R
Sbjct: 439 GFADLQKAIAISPKNAIGYSLRGQAYANTGDYARAISEYNRALQIKPNYGSAYANR 494


>gi|188997368|ref|YP_001931619.1| TPR repeat-containing protein [Sulfurihydrogenibium sp. YO3AOP1]
 gi|188932435|gb|ACD67065.1| TPR repeat-containing protein [Sulfurihydrogenibium sp. YO3AOP1]
          Length = 329

 Score = 66.2 bits (160), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 66/251 (26%), Positives = 118/251 (47%), Gaps = 20/251 (7%)

Query: 102 LLRATVYIFTSQSTKAIEDLTQLVEDTSVDPKIKVNAHIKRAVVHLHAAS--DFTKAFAD 159
           LL   +Y + +++ +    +T L E   +DP+I    H  R  V  H  +      A  +
Sbjct: 10  LLNKAIYHYENENFEMA--ITLLDEAILLDPEIP-EVHYWRGKVATHDLNQESLEVAIVE 66

Query: 160 LDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQRHFVVHKMI 219
           L EA ++ P+ AD+Y++RG++Y   G++EEA ++L+K I LNP    A +    +    +
Sbjct: 67  LSEAIRLKPDYADAYFERGRVYIQKGEFEEAKKDLEKAIQLNPKLKEAYS---LLAQIEL 123

Query: 220 VPGDRERVEQSLKEFRNFVDTHSNVVEACTLFAQVLVDQEDFDGAEEYFNRSIRVDPENA 279
           + G+ E+  + L++    V              ++  +   +  A E FNR+I  +    
Sbjct: 124 ISGNDEKAMKYLEK----VSHQEGDDRYYYSLGKIFYNAGKYQPAIEQFNRTIEKNKYFV 179

Query: 280 SLYVHRAMLMLQARGNVDEAIKLIEKAISI--DKSCMFA-----YETLGTIEVQRGRLEE 332
             YV++A   L   GN  EAI+ ++KAI +  ++   F      Y  +G  + + G   E
Sbjct: 180 DAYVYKAH-ALANIGNYQEAIENLKKAIILVPEEISYFIDMAKYYFEIGKQKAKEGNNIE 238

Query: 333 AVKCFNKALPL 343
           A + F K L +
Sbjct: 239 AAENFIKGLQI 249



 Score = 51.2 bits (121), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 22/52 (42%), Positives = 36/52 (69%)

Query: 468 AFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVA 519
           A  +L EA ++ P+ AD+Y++RG++Y   G++EEA ++L+K I LNP    A
Sbjct: 63  AIVELSEAIRLKPDYADAYFERGRVYIQKGEFEEAKKDLEKAIQLNPKLKEA 114


>gi|423064909|ref|ZP_17053699.1| putative TPR repeat protein [Arthrospira platensis C1]
 gi|406714152|gb|EKD09320.1| putative TPR repeat protein [Arthrospira platensis C1]
          Length = 631

 Score = 66.2 bits (160), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 51/225 (22%), Positives = 99/225 (44%), Gaps = 29/225 (12%)

Query: 153 FTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQRH 212
           + +A A  D A +++P++ +++YQ+G       QY +AL   D+ + + P    A   R 
Sbjct: 284 YKQAIAACDRALEINPDLDEAWYQKGNALVRLQQYSQALECYDRALKIQPQRSDAWYNRG 343

Query: 213 FVVHKM---------------IVPGDR-------------ERVEQSLKEFRNFVDTHSNV 244
            V+ ++               I P D              ++ EQ+L  +   +   +N 
Sbjct: 344 NVLVRLKRYSPALEAYNQALKIEPNDYAVWHNRGALLRKFQKYEQALDSYDRAIRLEANH 403

Query: 245 VEACTLFAQVLVDQEDFDGAEEYFNRSIRVDPENASLYVHRAMLMLQARGNVDEAIKLIE 304
            E       VL   + +  A   ++R+I+++P    ++ +R M +        EA+   E
Sbjct: 404 YETWHNRGNVLSQLKRYQEAISSYDRAIQINPGQFDIWANRGMDLCHIH-QYSEALSCYE 462

Query: 305 KAISIDKSCMFAYETLGTIEVQRGRLEEAVKCFNKALPLARDEAE 349
           +AIS++      + + G + V+  R EEAV C+++A+ L  D  E
Sbjct: 463 QAISLNSKEPELWISQGGVLVKLARHEEAVICYDRAISLKSDSYE 507



 Score = 64.7 bits (156), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 73/360 (20%), Positives = 158/360 (43%), Gaps = 48/360 (13%)

Query: 168 PNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQRHFVVHKMIVPGDRERV 227
           P +AD + ++G+      QY++A+   D+ + +NP+   A  Q+   + ++      ++ 
Sbjct: 265 PLIADDFLKKGEALINERQYKQAIAACDRALEINPDLDEAWYQKGNALVRL------QQY 318

Query: 228 EQSLKEFRNFVDTHSNVVEACTLFAQVLVDQEDFDGAEEYFNRSIRVDPENASLYVHRAM 287
            Q+L+ +   +       +A      VLV  + +  A E +N++++++P + +++ +R  
Sbjct: 319 SQALECYDRALKIQPQRSDAWYNRGNVLVRLKRYSPALEAYNQALKIEPNDYAVWHNRGA 378

Query: 288 LMLQARGNVDEAIKLIEKAISIDKSCMFAYETLGTIEVQRGRLEEAVKCFNKALPLARDE 347
           L L+     ++A+   ++AI ++ +    +   G +  Q  R +EA+  +++A+ +   +
Sbjct: 379 L-LRKFQKYEQALDSYDRAIRLEANHYETWHNRGNVLSQLKRYQEAISSYDRAIQINPGQ 437

Query: 348 AELSHIYSLRDAAIAQMKVCERYNIKKKVSPRSQNITKNEK---LAIKQLRENNDIIIRP 404
            +   I++ R      M +C  +   + +S   Q I+ N K   L I Q      ++++ 
Sbjct: 438 FD---IWANRG-----MDLCHIHQYSEALSCYEQAISLNSKEPELWISQ----GGVLVKL 485

Query: 405 ADKGGKTVVMDKADYTQKMTSILNSNDYEIIPGDPTKTIEESEKYGNLENESGQKHAASD 464
           A      +  D+A         L S+ YE   G            G +        A   
Sbjct: 486 ARHEEAVICYDRA-------ISLKSDSYEAWMGR-----------GEILT------ALKQ 521

Query: 465 FTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQRH 524
           + +A A+ D    + P+   ++ QRG       Q+++A+   D  IAL P+   A + RH
Sbjct: 522 YEQALANWDRVIALQPDAYQAWCQRGICLEKMEQHDDAIACFDTAIALKPDH--AESWRH 579



 Score = 51.2 bits (121), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 42/197 (21%), Positives = 89/197 (45%), Gaps = 13/197 (6%)

Query: 153 FTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALN---PNFHVARA 209
           + +A +  D A +++P   D +  RG   C   QY EAL   ++ I+LN   P   +++ 
Sbjct: 420 YQEAISSYDRAIQINPGQFDIWANRGMDLCHIHQYSEALSCYEQAISLNSKEPELWISQG 479

Query: 210 QRHFVVHKMIVPGDRERVEQSLKEFRNFVDTHSNVVEACTLFAQVLVDQEDFDGAEEYFN 269
               V+ K+       R E+++  +   +   S+  EA     ++L   + ++ A   ++
Sbjct: 480 G---VLVKL------ARHEEAVICYDRAISLKSDSYEAWMGRGEILTALKQYEQALANWD 530

Query: 270 RSIRVDPENASLYVHRAMLMLQARGNVDEAIKLIEKAISIDKSCMFAYETLGTIEVQRGR 329
           R I + P+    +  R  + L+     D+AI   + AI++      ++   G +  +  +
Sbjct: 531 RVIALQPDAYQAWCQRG-ICLEKMEQHDDAIACFDTAIALKPDHAESWRHRGALLSRLKK 589

Query: 330 LEEAVKCFNKALPLARD 346
            +EA+    KA+ + +D
Sbjct: 590 YQEAIASLGKAISIQKD 606


>gi|124026526|ref|YP_001015641.1| hypothetical protein NATL1_18211 [Prochlorococcus marinus str.
           NATL1A]
 gi|123961594|gb|ABM76377.1| Hypothetical protein NATL1_18211 [Prochlorococcus marinus str.
           NATL1A]
          Length = 603

 Score = 66.2 bits (160), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 68/270 (25%), Positives = 124/270 (45%), Gaps = 21/270 (7%)

Query: 155 KAFADLDEAEK-------VDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVA 207
           K F  L EAEK       ++PN A++Y   G I    GQ +EA  +  K I +  ++  A
Sbjct: 90  KKFGKLKEAEKCQREAIQINPNFAEAYSNLGNILSDLGQLKEAELSFRKAIEIKSDYAEA 149

Query: 208 RAQRHFVVHKMIVPGDRERVEQSLKEFRNFVDTHSNVVEACTLFAQVLVDQEDFDGAEEY 267
            +    ++       D  +++++   FR  ++  S+  EA +    +L D      AE  
Sbjct: 150 HSNLGNILR------DFGQLKEAELSFRKAIEIKSDYAEAHSNLGNILNDLGQLKEAELS 203

Query: 268 FNRSIRVDPENASLYVHRAMLMLQARGNVDEAIKLIEKAISIDKSCMFAYETLGTIEVQR 327
           F ++I + P+ A+ + +   ++L     + EA     KAI I    + AY  LG I    
Sbjct: 204 FRKAIEIKPDFANTH-NNLGIILSDLDQLKEAELSFRKAIEIKPDFIKAYSNLGNILRDL 262

Query: 328 GRLEEAVKCFNKALPLARDEAE----LSHIYSLRDAAIAQMKVCE-RYNIKKKVSPRSQN 382
           G+L+EA   F KA+ +  D AE    L+++  L+    + +K  E R+  K+   P  + 
Sbjct: 263 GQLKEAELSFRKAIKIKPDYAEAYFNLAYLELLKGNYKSGLKNYEFRFKKKQPTVPHIK- 321

Query: 383 ITKNEKLAIKQLRENNDIIIRPADKGGKTV 412
            TK +++  +Q ++   +++      G T+
Sbjct: 322 -TKLKRVTNEQFQKGEKLLVVSEQGLGDTL 350



 Score = 42.4 bits (98), Expect = 0.60,   Method: Compositional matrix adjust.
 Identities = 66/242 (27%), Positives = 105/242 (43%), Gaps = 43/242 (17%)

Query: 288 LMLQARGNVDEAIKLIEKAISIDKSCMFAYETLGTIEVQRGRLEEAVKCFNKALPLARDE 347
           ++L+  G + EA K   +AI I+ +   AY  LG I    G+L+EA   F KA+ +  D 
Sbjct: 87  VILKKFGKLKEAEKCQREAIQINPNFAEAYSNLGNILSDLGQLKEAELSFRKAIEIKSDY 146

Query: 348 AE----LSHIYSLRDAAIAQMKVCERYNIKKKVSPRSQNITKNEKLA-----IKQLRENN 398
           AE    L +I  LRD    Q+K  E  + +K +  +S     +  L      + QL+E  
Sbjct: 147 AEAHSNLGNI--LRD--FGQLKEAE-LSFRKAIEIKSDYAEAHSNLGNILNDLGQLKE-A 200

Query: 399 DIIIRPADKGGKTVVMDKADYTQKMTSILNSND------------YEIIPGDPTKTIEES 446
           ++  R A +    +  D A+    +  IL+  D             EI P      I+  
Sbjct: 201 ELSFRKAIE----IKPDFANTHNNLGIILSDLDQLKEAELSFRKAIEIKP----DFIKAY 252

Query: 447 EKYGNLENESGQ-KHAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRN 505
              GN+  + GQ K A   F KA        K+ P+ A++Y+    +  L G Y+  L+N
Sbjct: 253 SNLGNILRDLGQLKEAELSFRKAI-------KIKPDYAEAYFNLAYLELLKGNYKSGLKN 305

Query: 506 LD 507
            +
Sbjct: 306 YE 307


>gi|392411460|ref|YP_006448067.1| tetratricopeptide repeat protein [Desulfomonile tiedjei DSM 6799]
 gi|390624596|gb|AFM25803.1| tetratricopeptide repeat protein [Desulfomonile tiedjei DSM 6799]
          Length = 407

 Score = 66.2 bits (160), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 74/293 (25%), Positives = 122/293 (41%), Gaps = 56/293 (19%)

Query: 136 VNAHIKRAVVHLHAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLD 195
            +A  KR  V+L    D   A  DL +A K+DP  A +Y + G  Y     YE A+  L+
Sbjct: 63  AHAWAKRGEVNLRKG-DPQSAIKDLLQAVKLDPAYAAAYTRLGFAYNALNDYEHAIEALN 121

Query: 196 KTIALNPNFHVARAQRHFVVHKMIVPGDRERVEQSLKEFRNFVDTHSN----------VV 245
           + + L+P    A   R F  +       +   + ++++F   +  +SN           +
Sbjct: 122 QAVQLDPTSSEALNTRGFAFNG------KHDYDSAVRDFDAAIRLNSNDARYYNNRGFAL 175

Query: 246 EACTLFAQVLVD------------------------QEDFDGAEEYFNRSIRVDPENASL 281
                +A+ + D                        Q+DFD A E F R++++D + +S 
Sbjct: 176 NGKHEYARAVEDFDRAISLDSTKAMYFNNRGVAYLRQKDFDRALEDFERTLKLDSKFSSA 235

Query: 282 YVHRAMLMLQARGNVDEAIKLIEKAISIDKSCMFAYETLGTIEVQRGRLEEAVKCFNKAL 341
           Y +R M  L  +G  D+A++ I K I ++      Y+  GT   + G  E AVK   KA+
Sbjct: 236 YHNRGM-ALSGKGRHDKAVEEISKVIEMNPDSPLLYKDRGTAYRKMGEFELAVKDLEKAI 294

Query: 342 PLARDEAELSHIYSLRDAAIAQMKVCERYNIKKKVSPRSQNITKNEKLAIKQL 394
                  +L   ++   AA+AQ+             P+ +N T   KLA K L
Sbjct: 295 -------DLDKKFAPGYAALAQVYAFS-------TDPKYKNSTMALKLAEKAL 333



 Score = 56.6 bits (135), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 57/259 (22%), Positives = 116/259 (44%), Gaps = 14/259 (5%)

Query: 142 RAVVHLHAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALN 201
           RA +    A +   A A L EA K+    A ++ +RG++    G  + A+++L + + L+
Sbjct: 34  RAGLDAEDAGNLDDALARLTEALKLQGQSAHAWAKRGEVNLRKGDPQSAIKDLLQAVKLD 93

Query: 202 PNFHVARAQRHFVVHKMIVPGDRERVEQSLKEFRNFVDTHSNVVEACTLFAQVLVDQEDF 261
           P +  A  +  F  + +    D E   ++L +      T S   EA          + D+
Sbjct: 94  PAYAAAYTRLGFAYNAL---NDYEHAIEALNQAVQLDPTSS---EALNTRGFAFNGKHDY 147

Query: 262 DGAEEYFNRSIRVDPENASLYVHRAMLMLQARGNVDEAIKLIEKAISIDKSCMFAYETLG 321
           D A   F+ +IR++  +A  Y +R    L  +     A++  ++AIS+D +    +   G
Sbjct: 148 DSAVRDFDAAIRLNSNDARYYNNRG-FALNGKHEYARAVEDFDRAISLDSTKAMYFNNRG 206

Query: 322 TIEVQRGRLEEAVKCFNKALPLARDEAELSHIYSLRDAAIAQM----KVCERYNIKKKVS 377
              +++   + A++ F + L L   +++ S  Y  R  A++      K  E  +   +++
Sbjct: 207 VAYLRQKDFDRALEDFERTLKL---DSKFSSAYHNRGMALSGKGRHDKAVEEISKVIEMN 263

Query: 378 PRSQNITKNEKLAIKQLRE 396
           P S  + K+   A +++ E
Sbjct: 264 PDSPLLYKDRGTAYRKMGE 282



 Score = 44.7 bits (104), Expect = 0.11,   Method: Compositional matrix adjust.
 Identities = 52/239 (21%), Positives = 98/239 (41%), Gaps = 11/239 (4%)

Query: 283 VHRAMLMLQARGNVDEAIKLIEKAISIDKSCMFAYETLGTIEVQRGRLEEAVKCFNKALP 342
           + RA L  +  GN+D+A+  + +A+ +      A+   G + +++G  + A+K   +A+ 
Sbjct: 32  LFRAGLDAEDAGNLDDALARLTEALKLQGQSAHAWAKRGEVNLRKGDPQSAIKDLLQAVK 91

Query: 343 L----ARDEAELSHIY-SLRDAAIAQMKVCERYNIKKKVSPRSQNITKNEKLAIKQLREN 397
           L    A     L   Y +L D   A     E  N   ++ P S         A    + +
Sbjct: 92  LDPAYAAAYTRLGFAYNALNDYEHA----IEALNQAVQLDPTSSEALNTRGFAFNG-KHD 146

Query: 398 NDIIIRPADKGGKTVVMDKADYTQKMTSILNSNDYEIIPGDPTKTIE-ESEKYGNLENES 456
            D  +R  D   +    D   Y  +  ++   ++Y     D  + I  +S K     N  
Sbjct: 147 YDSAVRDFDAAIRLNSNDARYYNNRGFALNGKHEYARAVEDFDRAISLDSTKAMYFNNRG 206

Query: 457 GQKHAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPN 515
                  DF +A  D +   K+D   + +Y+ RG      G++++A+  + K I +NP+
Sbjct: 207 VAYLRQKDFDRALEDFERTLKLDSKFSSAYHNRGMALSGKGRHDKAVEEISKVIEMNPD 265



 Score = 43.5 bits (101), Expect = 0.32,   Method: Compositional matrix adjust.
 Identities = 52/230 (22%), Positives = 88/230 (38%), Gaps = 42/230 (18%)

Query: 115 TKAIEDLTQLVEDTSVDPKIKVNAHIKRAVVHLHAASDFTKAFADLDEAEKVDPNVADSY 174
            +A+ED  + +   S+D   K      R V +L    DF +A  D +   K+D   + +Y
Sbjct: 182 ARAVEDFDRAI---SLD-STKAMYFNNRGVAYLRQ-KDFDRALEDFERTLKLDSKFSSAY 236

Query: 175 YQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQRHFVVHKMIVPGDRERVEQSLKEF 234
           + RG      G++++A+  + K I +NP+  +    R     KM         E ++K+ 
Sbjct: 237 HNRGMALSGKGRHDKAVEEISKVIEMNPDSPLLYKDRGTAYRKM------GEFELAVKDL 290

Query: 235 RNFVDTHSNVVEACTLFAQVLVDQEDFDGAEEYFNRSIRVDPENASLYVHRAMLMLQARG 294
              +D            AQV                +   DP+    Y +  M       
Sbjct: 291 EKAIDLDKKFAPGYAALAQVY---------------AFSTDPK----YKNSTM------- 324

Query: 295 NVDEAIKLIEKAISIDKS-CMFAYETLGTIEVQRGRLEEAVKCFNKALPL 343
               A+KL EKA+++ K       E L  I+    +   AV+   KAL +
Sbjct: 325 ----ALKLAEKALALGKGDSPDILENLAEIQFANNQKALAVRTLQKALTM 370



 Score = 41.2 bits (95), Expect = 1.6,   Method: Compositional matrix adjust.
 Identities = 61/291 (20%), Positives = 119/291 (40%), Gaps = 26/291 (8%)

Query: 257 DQEDFDGAEEYFNRSIRVDPENASLYVHRAMLMLQARGNVDEAIKLIEKAISIDKSCMFA 316
           D  + D A      ++++  ++A  +  R  + L+ +G+   AIK + +A+ +D +   A
Sbjct: 41  DAGNLDDALARLTEALKLQGQSAHAWAKRGEVNLR-KGDPQSAIKDLLQAVKLDPAYAAA 99

Query: 317 YETLGTIEVQRGRLEEAVKCFNKALPLARDEAELSHIYSLR-------DAAIAQMKVCER 369
           Y  LG         E A++  N+A+ L    +E  +            D+A+       R
Sbjct: 100 YTRLGFAYNALNDYEHAIEALNQAVQLDPTSSEALNTRGFAFNGKHDYDSAVRDFDAAIR 159

Query: 370 YNIKKKVSPRSQNITKNEKLAIKQLRENNDIIIRPADKGGKTVVMDKADY-TQKMTSILN 428
            N        ++    N K    +  E+ D  I        ++   KA Y   +  + L 
Sbjct: 160 LNSNDARYYNNRGFALNGKHEYARAVEDFDRAI--------SLDSTKAMYFNNRGVAYLR 211

Query: 429 SNDYEIIPGDPTKTIEESEKYGNLENESGQKHAASD-FTKAFADLDEAEKVDPNVADSYY 487
             D++    D  +T++   K+ +  +  G   +      KA  ++ +  +++P+    Y 
Sbjct: 212 QKDFDRALEDFERTLKLDSKFSSAYHNRGMALSGKGRHDKAVEEISKVIEMNPDSPLLYK 271

Query: 488 QRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQRHFVWTSTLAELMAFS 538
            RG  Y   G++E A+++L+K I L+  F    A         LA++ AFS
Sbjct: 272 DRGTAYRKMGEFELAVKDLEKAIDLDKKFAPGYA--------ALAQVYAFS 314


>gi|163851391|ref|YP_001639434.1| hypothetical protein Mext_1964 [Methylobacterium extorquens PA1]
 gi|254561150|ref|YP_003068245.1| hypothetical protein METDI2727 [Methylobacterium extorquens DM4]
 gi|163662996|gb|ABY30363.1| Tetratricopeptide TPR_2 repeat protein [Methylobacterium extorquens
           PA1]
 gi|254268428|emb|CAX24385.1| conserved hypothetical protein; putative exported protein
           [Methylobacterium extorquens DM4]
          Length = 286

 Score = 66.2 bits (160), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 52/185 (28%), Positives = 81/185 (43%), Gaps = 7/185 (3%)

Query: 157 FADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQRHFVVH 216
            A L +    +P+ A +Y  RG  Y   GQ+ EA+ +  K I L+PN   A   R     
Sbjct: 54  IASLSDVISRNPSDAGAYNTRGAAYARAGQFGEAITDFSKAIQLDPNSASAYNNRALAYR 113

Query: 217 KMIVPGDRERVEQSLKEFRNFVDTHSNVVEACTLFAQVLVDQEDFDGAEEYFNRSIRVDP 276
           +        R + ++++F   +    N   A    A +   Q D DGA    N +IR+ P
Sbjct: 114 QT------GRADAAMQDFSKAIANDPNFSAAYIGRANLERAQGDLDGALNDLNVAIRLAP 167

Query: 277 ENASLYVHRAMLMLQARGNVDEAIKLIEKAISIDKSCMFAYETLGTIEVQRGRLEEAVKC 336
           E+A  Y H   L+ Q + +  EAI     AI  +      Y   G   +  G+ ++A++ 
Sbjct: 168 ESAEAY-HARGLVRQKQNHNPEAIGDFAAAIDRNPFVAAPYAARGQSLISLGQYDKAIED 226

Query: 337 FNKAL 341
           FN AL
Sbjct: 227 FNAAL 231



 Score = 43.1 bits (100), Expect = 0.35,   Method: Compositional matrix adjust.
 Identities = 24/67 (35%), Positives = 36/67 (53%), Gaps = 1/67 (1%)

Query: 454 NESGQKHA-ASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIAL 512
           N  G  +A A  F +A  D  +A ++DPN A +Y  R   Y   G+ + A+++  K IA 
Sbjct: 72  NTRGAAYARAGQFGEAITDFSKAIQLDPNSASAYNNRALAYRQTGRADAAMQDFSKAIAN 131

Query: 513 NPNFHVA 519
           +PNF  A
Sbjct: 132 DPNFSAA 138



 Score = 39.3 bits (90), Expect = 5.1,   Method: Compositional matrix adjust.
 Identities = 41/176 (23%), Positives = 76/176 (43%), Gaps = 11/176 (6%)

Query: 104 RATVYIFTSQSTKAIEDLTQLVEDTSVDPKIKVNAHIKRAVVHLHAASDFTKAFADLDEA 163
           RA  Y  T ++  A++D ++ + +   DP     A+I RA +   A  D   A  DL+ A
Sbjct: 108 RALAYRQTGRADAAMQDFSKAIAN---DPNFSA-AYIGRANLE-RAQGDLDGALNDLNVA 162

Query: 164 EKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQRHFVVHKMIVPGD 223
            ++ P  A++Y+ RG +        EA+ +    I  NP      A R      +I  G 
Sbjct: 163 IRLAPESAEAYHARGLVRQKQNHNPEAIGDFAAAIDRNPFVAAPYAARG---QSLISLG- 218

Query: 224 RERVEQSLKEFRNFVDTHSNVVEACTLFAQVLVDQEDFDGAEEYFNRSIRVDPENA 279
             + ++++++F   ++ +S    +                A E + ++ R+DP NA
Sbjct: 219 --QYDKAIEDFNAALNVNSKDAGSWAYRGLAYEKTNRRKEANESYQQAARLDPNNA 272


>gi|425460197|ref|ZP_18839679.1| Similar to tr|Q96301|Q96301 [Microcystis aeruginosa PCC 9808]
 gi|389827192|emb|CCI21792.1| Similar to tr|Q96301|Q96301 [Microcystis aeruginosa PCC 9808]
          Length = 1271

 Score = 66.2 bits (160), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 51/187 (27%), Positives = 87/187 (46%), Gaps = 7/187 (3%)

Query: 162  EAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQRHFVVHKMIVP 221
            +A KVDP  A SY+  G +    GQ +EA+    + I   P++  A      V  ++   
Sbjct: 1023 QAIKVDPTYAKSYHNLGFLAAQQGQLQEAISYYQQAIQSQPDYPTAFYNLGLVYEQL--- 1079

Query: 222  GDRERVEQSLKEFRNFVDTHSNVVEACTLFAQVLVDQEDFDGAEEYFNRSIRVDPENASL 281
               E  E+++  + + V   S  VE     AQ+   QE++  AE+Y+  ++ + P+N  L
Sbjct: 1080 ---EETEKAIACYSHSVQLDSTNVEVYKSLAQLYDRQENYAKAEKYYRCALLLQPDNLEL 1136

Query: 282  YVHRAMLMLQARGNVDEAIKLIEKAISIDKSCMFAYETLGTIEVQRGRLEEAVKCFNKAL 341
              +  +++ + +   D+A+   +K I        AY  LG    Q+  L +A  CF KA+
Sbjct: 1137 RYNLGVVLYEQK-KFDKAVSCFQKIIQAKPQDAIAYLHLGISYKQQKLLTKAKSCFEKAI 1195

Query: 342  PLARDEA 348
             L  D A
Sbjct: 1196 ELDPDYA 1202



 Score = 41.6 bits (96), Expect = 0.99,   Method: Compositional matrix adjust.
 Identities = 57/234 (24%), Positives = 96/234 (41%), Gaps = 34/234 (14%)

Query: 260  DFDGAEEYFNRSIRVDPENASLYVHRAMLMLQARGNVDEAIKLIEKAISIDKSCMFAYET 319
            + + A+ ++ ++I+VDP  A  Y +   L  Q +G + EAI   ++AI        A+  
Sbjct: 1013 ELESAKNFYLQAIKVDPTYAKSYHNLGFLAAQ-QGQLQEAISYYQQAIQSQPDYPTAFYN 1071

Query: 320  LGTIEVQRGRLEEAVKCFNKALPLARDEAELSHIYSLRDAAIAQMKVCERYNIKKKVSPR 379
            LG +  Q    E+A+ C++ ++ L     E+                   Y    ++  R
Sbjct: 1072 LGLVYEQLEETEKAIACYSHSVQLDSTNVEV-------------------YKSLAQLYDR 1112

Query: 380  SQNITKNEKLAIKQLRENNDIIIRPADKGGKTVVMDKADYTQKMTSILNSNDYEIIPGDP 439
             +N  K EK     L    D +    + G   VV+    Y QK      S   +II   P
Sbjct: 1113 QENYAKAEKYYRCALLLQPDNLELRYNLG---VVL----YEQKKFDKAVSCFQKIIQAKP 1165

Query: 440  TKTIEESEKYGNLENESGQKHAASDFTKAFADLDEAEKVDPNVADSYYQRGQIY 493
               I     Y +L     Q+      TKA +  ++A ++DP+ A +YY  G +Y
Sbjct: 1166 QDAI----AYLHLGISYKQQKL---LTKAKSCFEKAIELDPDYAMAYYNLGVVY 1212


>gi|300864445|ref|ZP_07109316.1| tetratricopeptide TPR_2 [Oscillatoria sp. PCC 6506]
 gi|300337589|emb|CBN54464.1| tetratricopeptide TPR_2 [Oscillatoria sp. PCC 6506]
          Length = 1129

 Score = 66.2 bits (160), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 51/197 (25%), Positives = 95/197 (48%), Gaps = 7/197 (3%)

Query: 155 KAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQRHF- 213
           KA     +A  + P++A  Y+  G+++   G+  EA+    KT  +NP  HV  A  HF 
Sbjct: 403 KAIVYYQQAIALKPDLAGVYWNLGKVFQKQGKSAEAIAYFQKTSDINP--HVVGADFHFN 460

Query: 214 VVHKMIVPGDRERVEQSLKEFRNFVDTHSNVVEACTLFAQVLVDQEDFDGAEEYFNRSIR 273
           + + ++  G R+   QS   ++  +    +  EA        + Q + + A +Y+ ++I 
Sbjct: 461 LANTLLTEGKRDEAIQS---YQRAIAVKPDWAEAYANIGSARMQQGNLEEAIQYYRKAIA 517

Query: 274 VDPENASLYVHRAMLMLQARGNVDEAIKLIEKAISIDKSCMFAYETLGTIEVQRGRLEEA 333
           + P+  +L+ + A  +L  +G  +EAI   ++AI        A   +G     +G+LEEA
Sbjct: 518 IKPQLEALHFNIANALLH-QGKYEEAISNYQEAIKHKPDWPDAIANMGNAFSMQGKLEEA 576

Query: 334 VKCFNKALPLARDEAEL 350
           +  + +AL    D AE+
Sbjct: 577 IATYQQALVYKPDWAEV 593



 Score = 60.5 bits (145), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 50/211 (23%), Positives = 97/211 (45%), Gaps = 10/211 (4%)

Query: 135 KVNAHIKRAVVHLHAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNL 194
           +V  + KRA  +L    +F +A A    A K+ P+   +Y   G      G+ + A+R  
Sbjct: 316 EVEEYKKRAEAYL-LQGNFREAIASCQLALKIRPDFIQAYVTLGNALQGQGKMDAAIRAY 374

Query: 195 DKTIALNPNFHVARAQRHFVVHKMIVPGDRERVEQSLKEFRNFVDTHSNVVEACTLFAQV 254
           ++ +   PN+   RA    +  KM        +E+++  ++  +    ++        +V
Sbjct: 375 EQALEFEPNYAEVRANIGSMYFKM------GHLEKAIVYYQQAIALKPDLAGVYWNLGKV 428

Query: 255 LVDQEDFDGAEEYFNRSIRVDPE--NASLYVHRAMLMLQARGNVDEAIKLIEKAISIDKS 312
              Q     A  YF ++  ++P    A  + + A  +L   G  DEAI+  ++AI++   
Sbjct: 429 FQKQGKSAEAIAYFQKTSDINPHVVGADFHFNLANTLL-TEGKRDEAIQSYQRAIAVKPD 487

Query: 313 CMFAYETLGTIEVQRGRLEEAVKCFNKALPL 343
              AY  +G+  +Q+G LEEA++ + KA+ +
Sbjct: 488 WAEAYANIGSARMQQGNLEEAIQYYRKAIAI 518



 Score = 55.8 bits (133), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 89/415 (21%), Positives = 175/415 (42%), Gaps = 60/415 (14%)

Query: 140 IKRAVVHLHAA-SDFTKAFADLDEAEKVDP-----------NVADSYYQR--GQIYCLFG 185
           I  ++V+L AA + F KA   L EA K+D            NV D+   R   ++Y L G
Sbjct: 2   ITESLVNLEAAQAHFNKANW-LKEAGKLDAAADNYQKAISFNVEDAEIHRKLAEVYILKG 60

Query: 186 QYEEALRNLDKTIALNPNFHVARAQRHFVVHKMIVPGDRERVEQSLKEFRNFVDTHSNVV 245
           Q + A+ +    + + P+F  A        H       +E++E ++  +   ++   N  
Sbjct: 61  QLDSAIASCKFALKVKPDFAPAYLTMGNAFH------SQEQLEMAIHAYSQALEIDPNFA 114

Query: 246 EACTLFAQVLVDQEDFDGAEEYFNRSIRVDPENASLYVHRAML--MLQARGNVDEAIKLI 303
           EA      +       D A   + +++  +P  AS+ +   ML  +LQ + ++  AI   
Sbjct: 115 EAHANLGSMYYKLGRLDEAANSYQKALANNPNLASVLL---MLGNILQQQEDLGAAIACY 171

Query: 304 EKAISIDKSCMFAYETLGTIEVQRGRLEEAVKCFNKALPLARDEAELSHIYSLRDAAIAQ 363
           +K++ +    +  Y  L     +   ++ A+ C+ K L L   +AE +   S    ++ Q
Sbjct: 172 QKSLVLQPGLLRNYYKLAEALTKSNNVDAAISCYQKVLQLQPGDAEATDKLS----SLQQ 227

Query: 364 MKVCERYNIKKKVSPRSQNITKNEKLAIKQ---------LRENNDIIIRPAD----KGGK 410
           +K  E    + K SP  +  TK + L +++         ++++ +  ++P+     +  +
Sbjct: 228 LKSQE----EPKNSPNDEG-TKGQFLELEKEGEWQQQEPIKQDEEYGLQPSSLNLPQTTQ 282

Query: 411 TVVMDK----ADYTQKMTSILNSNDYEIIPGDPTKTIEESEKYGNLENESGQKHAASDFT 466
            + +D+    AD T +  S  N N     P +     +E E+Y   +  +       +F 
Sbjct: 283 DLSLDRPFETADETAEQVSSFNFN-----PPEQVAKFQEVEEY---KKRAEAYLLQGNFR 334

Query: 467 KAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARA 521
           +A A    A K+ P+   +Y   G      G+ + A+R  ++ +   PN+   RA
Sbjct: 335 EAIASCQLALKIRPDFIQAYVTLGNALQGQGKMDAAIRAYEQALEFEPNYAEVRA 389



 Score = 53.9 bits (128), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 48/197 (24%), Positives = 88/197 (44%), Gaps = 9/197 (4%)

Query: 147 LHAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHV 206
           L        A    ++A + +PN A+     G +Y   G  E+A+    + IAL P+   
Sbjct: 361 LQGQGKMDAAIRAYEQALEFEPNYAEVRANIGSMYFKMGHLEKAIVYYQQAIALKPDLAG 420

Query: 207 ARAQRHFVVHKMIVPGDRERVEQSLKEFRNFVDTHSNVVEACTLF--AQVLVDQEDFDGA 264
                  V  K      + +  +++  F+   D + +VV A   F  A  L+ +   D A
Sbjct: 421 VYWNLGKVFQK------QGKSAEAIAYFQKTSDINPHVVGADFHFNLANTLLTEGKRDEA 474

Query: 265 EEYFNRSIRVDPENASLYVHRAMLMLQARGNVDEAIKLIEKAISIDKSCMFAYETLGTIE 324
            + + R+I V P+ A  Y +     +Q +GN++EAI+   KAI+I       +  +    
Sbjct: 475 IQSYQRAIAVKPDWAEAYANIGSARMQ-QGNLEEAIQYYRKAIAIKPQLEALHFNIANAL 533

Query: 325 VQRGRLEEAVKCFNKAL 341
           + +G+ EEA+  + +A+
Sbjct: 534 LHQGKYEEAISNYQEAI 550


>gi|449119628|ref|ZP_21756024.1| hypothetical protein HMPREF9725_01489 [Treponema denticola H1-T]
 gi|449122019|ref|ZP_21758365.1| hypothetical protein HMPREF9727_01125 [Treponema denticola MYR-T]
 gi|449131739|ref|ZP_21767926.1| hypothetical protein HMPREF9724_02591 [Treponema denticola SP37]
 gi|448938371|gb|EMB19304.1| hypothetical protein HMPREF9724_02591 [Treponema denticola SP37]
 gi|448949460|gb|EMB30285.1| hypothetical protein HMPREF9727_01125 [Treponema denticola MYR-T]
 gi|448950618|gb|EMB31440.1| hypothetical protein HMPREF9725_01489 [Treponema denticola H1-T]
          Length = 370

 Score = 66.2 bits (160), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 58/254 (22%), Positives = 115/254 (45%), Gaps = 16/254 (6%)

Query: 102 LLRATVYIFTSQSTKAIEDLTQLVEDTSVDPKIKVNAHIKRAVVHLHAASDFTKAFADLD 161
           LLR  ++    +  +AI D ++++E    DP+    A+  R+  +L    DF KA +D++
Sbjct: 93  LLRGLIFYAMMKYNEAIVDFSRVIELIPNDPR----AYNNRSSCYLEFG-DFEKALSDIN 147

Query: 162 EAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQRHFVVHKMIVP 221
            A K+DP  +  +  RG+I+     Y+ A+ N  + + LNP    A   R  + ++ I  
Sbjct: 148 SAIKLDPKDSLHFKNRGEIFYRLKDYDNAILNYTQALKLNPRDSDAYFSRG-LFYETIKD 206

Query: 222 GDRERVE--QSLKEFRNFVDTHSNVVEACTLFAQVLVDQEDFDGAEEYFNRSIRVDPENA 279
            +    +  ++LK      D + ++  +C          +++D A   FN+ I+++  +A
Sbjct: 207 YNSALSDYYKALKLKYRSNDIYFHIGLSCYAL-------KEYDNAINAFNKYIKINNTDA 259

Query: 280 SLYVHRAMLMLQARGNVDEAIKLIEKAISIDKSCMFAYETLGTIEVQRGRLEEAVKCFNK 339
             Y  R  +    + N D +IK ++ AI++  S    +         +  L EA+ C  +
Sbjct: 260 EAYTWRGSIYFILK-NYDNSIKDLDMAINLGGSNEVVFYNKAVALYSKNELNEAIDCLEE 318

Query: 340 ALPLARDEAELSHI 353
            + L  D  +   +
Sbjct: 319 GINLFPDYYDFYQV 332



 Score = 45.4 bits (106), Expect = 0.084,   Method: Compositional matrix adjust.
 Identities = 32/116 (27%), Positives = 49/116 (42%), Gaps = 10/116 (8%)

Query: 433 EIIPGDPTKTIEESEKYGNLENESGQKHAASDFTKAFADLDEAEKVDPNVADSYYQRGQI 492
           E+IP DP              N S       DF KA +D++ A K+DP  +  +  RG+I
Sbjct: 117 ELIPNDPRA----------YNNRSSCYLEFGDFEKALSDINSAIKLDPKDSLHFKNRGEI 166

Query: 493 YCLFGQYEEALRNLDKTIALNPNFHVARAQRHFVWTSTLAELMAFSDEFMIPKITY 548
           +     Y+ A+ N  + + LNP    A   R   + +      A SD +   K+ Y
Sbjct: 167 FYRLKDYDNAILNYTQALKLNPRDSDAYFSRGLFYETIKDYNSALSDYYKALKLKY 222



 Score = 42.0 bits (97), Expect = 0.87,   Method: Compositional matrix adjust.
 Identities = 41/175 (23%), Positives = 85/175 (48%), Gaps = 14/175 (8%)

Query: 167 DPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQRHFVVHKMIVPGDRER 226
           DPN    YY+RG  Y L G Y+ A+ ++++++ +NPN+  +   R  + + M+      +
Sbjct: 51  DPNNYKLYYERGYYYSLSGYYDLAIHDINRSLKINPNYEESILLRGLIFYAMM------K 104

Query: 227 VEQSLKEFRNFVDTHSNVVEACTLFAQVLVDQEDFDGAEEYFNRSIRVDPENASLYVHRA 286
             +++ +F   ++   N   A    +   ++  DF+ A    N +I++DP+++  + +R 
Sbjct: 105 YNEAIVDFSRVIELIPNDPRAYNNRSSCYLEFGDFEKALSDINSAIKLDPKDSLHFKNRG 164

Query: 287 MLMLQARGNVDEAIKLIEKAISIDKSCMFAYETLGTIEVQRGRLEEAVKCFNKAL 341
            +  + + + D AI    +A+ ++     AY         RG   E +K +N AL
Sbjct: 165 EIFYRLK-DYDNAILNYTQALKLNPRDSDAY-------FSRGLFYETIKDYNSAL 211



 Score = 40.4 bits (93), Expect = 2.2,   Method: Compositional matrix adjust.
 Identities = 42/204 (20%), Positives = 81/204 (39%), Gaps = 27/204 (13%)

Query: 156 AFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQRHFVV 215
           A  D++ + K++PN  +S   RG I+    +Y EA+ +  + I L PN   A   R    
Sbjct: 74  AIHDINRSLKINPNYEESILLRGLIFYAMMKYNEAIVDFSRVIELIPNDPRAYNNR---- 129

Query: 216 HKMIVPGDRERVEQSLKEFRNFVDTHSNVVEACTL----------FAQVLVDQEDFDGAE 265
                            EF +F    S++  A  L            ++    +D+D A 
Sbjct: 130 ------------SSCYLEFGDFEKALSDINSAIKLDPKDSLHFKNRGEIFYRLKDYDNAI 177

Query: 266 EYFNRSIRVDPENASLYVHRAMLMLQARGNVDEAIKLIEKAISIDKSCMFAYETLGTIEV 325
             + ++++++P ++  Y  R  L  +   + + A+    KA+ +       Y  +G    
Sbjct: 178 LNYTQALKLNPRDSDAYFSRG-LFYETIKDYNSALSDYYKALKLKYRSNDIYFHIGLSCY 236

Query: 326 QRGRLEEAVKCFNKALPLARDEAE 349
                + A+  FNK + +   +AE
Sbjct: 237 ALKEYDNAINAFNKYIKINNTDAE 260


>gi|323137815|ref|ZP_08072890.1| Tetratricopeptide TPR_1 repeat-containing protein [Methylocystis
           sp. ATCC 49242]
 gi|322396818|gb|EFX99344.1| Tetratricopeptide TPR_1 repeat-containing protein [Methylocystis
           sp. ATCC 49242]
          Length = 290

 Score = 66.2 bits (160), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 65/244 (26%), Positives = 105/244 (43%), Gaps = 17/244 (6%)

Query: 104 RATVYIFTSQSTKAIEDLTQLVEDTSVDPKIKVNAHIKRAVVHLHAASDFTKAFADLDEA 163
           R    I  + S  A  ++  L E    +P     A+  R V +      F +A AD  +A
Sbjct: 47  RGIAEIADTDSKAAAANIDSLTEVIRRNPS-SAEAYNTRGVAYARVGR-FNEAIADFTQA 104

Query: 164 EKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQRHFVVHKMIVPGD 223
            K+DPN A +Y  R       GQ E A  + D  I +NPN   A   R  ++        
Sbjct: 105 IKLDPNSAAAYTNRALAQRQIGQNEAARNDFDHAIQVNPNHAPAYVGRANLL-------- 156

Query: 224 RERVEQSLKEFRNFVDT--HSNVVEACTLFAQVLVDQEDFDGAEEY--FNRSIRVDPENA 279
             R + +L +  + +DT    N   A    A+ L+ Q+  D A     F+ +I  DP  A
Sbjct: 157 --RAQGNLDQALSDLDTAIRLNPESAQAFHARGLIHQKRGDNARAVTDFDNAIDRDPFAA 214

Query: 280 SLYVHRAMLMLQARGNVDEAIKLIEKAISIDKSCMFAYETLGTIEVQRGRLEEAVKCFNK 339
           + Y  R   ++ A G  D+A++    A+++D     A+  LG    + G  ++A + + +
Sbjct: 215 APYQARGESLV-ALGKYDKAVEDFNAALNVDNKSALAWAWLGLAYEKNGNRQKAQESYQR 273

Query: 340 ALPL 343
           AL L
Sbjct: 274 ALQL 277



 Score = 42.4 bits (98), Expect = 0.59,   Method: Compositional matrix adjust.
 Identities = 39/124 (31%), Positives = 56/124 (45%), Gaps = 16/124 (12%)

Query: 402 IRPADKGGKTVVMDKADYTQKMTSILNSNDYEIIPGDPTKTIEESEKYGNLENESGQKHA 461
           IRP  +G    + + AD   K  +    +  E+I  +P+     +E Y    N  G  +A
Sbjct: 42  IRPPGRG----IAEIADTDSKAAAANIDSLTEVIRRNPS----SAEAY----NTRGVAYA 89

Query: 462 -ASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNF---H 517
               F +A AD  +A K+DPN A +Y  R       GQ E A  + D  I +NPN    +
Sbjct: 90  RVGRFNEAIADFTQAIKLDPNSAAAYTNRALAQRQIGQNEAARNDFDHAIQVNPNHAPAY 149

Query: 518 VARA 521
           V RA
Sbjct: 150 VGRA 153


>gi|430744814|ref|YP_007203943.1| serine/threonine protein kinase [Singulisphaera acidiphila DSM 18658]
 gi|430016534|gb|AGA28248.1| serine/threonine protein kinase [Singulisphaera acidiphila DSM 18658]
          Length = 1199

 Score = 66.2 bits (160), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 57/216 (26%), Positives = 99/216 (45%), Gaps = 9/216 (4%)

Query: 128  TSVDPKIKVNAHIKRAVVHLHAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQY 187
            T ++PK  V  HI   V  L       +A A L  A  +DPN A ++Y  G       + 
Sbjct: 858  TQLNPKDAV-PHISLGVA-LSKQDKLEEAVASLKRAISLDPNYATAHYNLGVALSKQDKL 915

Query: 188  EEALRNLDKTIALNPNFHVARAQRHFVVHKMIVPGDRERVEQSLKEFRNFVDTHSNVVEA 247
            +EA+ +L +TIAL+PN+  A    H+ +       ++ ++++++  +R  ++ + N   A
Sbjct: 916  DEAVASLKRTIALDPNYATA----HYNLGNAY--SEQRKLDEAVTSYRRAIELNRNYTSA 969

Query: 248  CTLFAQVLVDQEDFDGAEEYFNRSIRVDPENASLYVHRAMLMLQARGNVDEAIKLIEKAI 307
                   L+ Q     A   F R I +D  +A  + ++  + L+     DEA+     AI
Sbjct: 970  HLNLGNELIRQGKLVDAVTSFKRVIELDSNHARAH-NQLGIALRRLKRWDEAVTAHRTAI 1028

Query: 308  SIDKSCMFAYETLGTIEVQRGRLEEAVKCFNKALPL 343
             +D     AY  LG     +G L EA+  + +A+ L
Sbjct: 1029 KLDPKYARAYHELGVTLQAQGELGEAITSYKRAIEL 1064



 Score = 57.0 bits (136), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 59/213 (27%), Positives = 100/213 (46%), Gaps = 18/213 (8%)

Query: 136 VNAHIKRAVVHLHAA-SDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNL 194
           VN ++  A+  L  A  D + AFA    A  + P  A ++   G    + G++ EA+ + 
Sbjct: 661 VNYNLAIALSKLGPAHRDASVAFAT--AAVALRPQSAAAHNVLGIALKVQGKFGEAVASY 718

Query: 195 DKTIALNPNFHVARAQRHFVVHKMIVPG--DRERVEQSLKEFRNFVDTHSNVVEACTLFA 252
           ++ + L+P        +H   H  +      ++++E++   FR  +    N   A T   
Sbjct: 719 ERALTLDP--------KHVPAHCNLGGALMAQQKLEEANARFRAAIALDPNSAPAHTGLG 770

Query: 253 QVLVDQEDFDGAEEYFNRSIRVDPENASLY--VHRAMLMLQARGNVDEAIKLIEKAISID 310
             L DQ   D A E   R+I +D ++AS +  + RA L LQ +  +DEAI    +AI++D
Sbjct: 771 WALCDQGKLDEAVESGRRAIALDSKSASAHYNLGRA-LALQKK--LDEAISCYRQAIALD 827

Query: 311 KSCMFAYETLGTIEVQRGRLEEAVKCFNKALPL 343
            +   A+  LG     +G+  EAV C+  A  L
Sbjct: 828 PTFAKAHMNLGNELGNQGKWAEAVACYETATQL 860



 Score = 54.3 bits (129), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 84/388 (21%), Positives = 162/388 (41%), Gaps = 44/388 (11%)

Query: 129  SVDPKIKVNAHIKRAVVHLHAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYE 188
            ++DPK  V AH       L A     +A A    A  +DPN A ++   G   C  G+ +
Sbjct: 723  TLDPK-HVPAHCNLGGA-LMAQQKLEEANARFRAAIALDPNSAPAHTGLGWALCDQGKLD 780

Query: 189  EALRNLDKTIALNPNFHVARAQRHFVVHKMIVPGDRERVEQSLKEFRNFVDTHSNVVEAC 248
            EA+ +  + IAL+       A  H+ + + +    ++++++++  +R  +       +A 
Sbjct: 781  EAVESGRRAIALDSK----SASAHYNLGRALAL--QKKLDEAISCYRQAIALDPTFAKAH 834

Query: 249  TLFAQVLVDQEDFDGAEEYFNRSIRVDPENASLYVHRAMLMLQARGNVDEAIKLIEKAIS 308
                  L +Q  +  A   +  + +++P++A  ++   +  L  +  ++EA+  +++AIS
Sbjct: 835  MNLGNELGNQGKWAEAVACYETATQLNPKDAVPHISLGV-ALSKQDKLEEAVASLKRAIS 893

Query: 309  IDKSCMFAYETLGTIEVQRGRLEEAVKCFNKALPLARDEAELSHIYSLRDAAIAQMKVCE 368
            +D +   A+  LG    ++ +L+EAV    + + L  D    +  Y+L +A   Q K+ E
Sbjct: 894  LDPNYATAHYNLGVALSKQDKLDEAVASLKRTIAL--DPNYATAHYNLGNAYSEQRKLDE 951

Query: 369  RYNIKKKVSPRSQNITKNEKLAIKQLRENNDIIIRPADKGGKTVVMDKADYTQKMTSILN 428
                   V+   + I  N       L   N++I     + GK V          +TS   
Sbjct: 952  ------AVTSYRRAIELNRNYTSAHLNLGNELI-----RQGKLV--------DAVTSF-- 990

Query: 429  SNDYEIIPGDPTKTIEESEKYGNLENESG-QKHAASDFTKAFADLDEAEKVDPNVADSYY 487
                        + IE    +    N+ G        + +A      A K+DP  A +Y+
Sbjct: 991  -----------KRVIELDSNHARAHNQLGIALRRLKRWDEAVTAHRTAIKLDPKYARAYH 1039

Query: 488  QRGQIYCLFGQYEEALRNLDKTIALNPN 515
            + G      G+  EA+ +  + I L PN
Sbjct: 1040 ELGVTLQAQGELGEAITSYKRAIELEPN 1067



 Score = 49.7 bits (117), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 62/262 (23%), Positives = 107/262 (40%), Gaps = 34/262 (12%)

Query: 258 QEDFDGAEEYFNRSIRVDPENASLYVHRAMLMLQARGNVDEAIKLIEKAISIDKSCMFAY 317
           Q  F  A   + R++ +DP++   + +    ++ A+  ++EA      AI++D +   A+
Sbjct: 708 QGKFGEAVASYERALTLDPKHVPAHCNLGGALM-AQQKLEEANARFRAAIALDPNSAPAH 766

Query: 318 ETLGTIEVQRGRLEEAVKCFNKALPLARDEAELSHIYSLRDAAIAQMKVCERYNIKKKVS 377
             LG     +G+L+EAV+   +A+ L  D    S  Y+L  A   Q K+ E       +S
Sbjct: 767 TGLGWALCDQGKLDEAVESGRRAIAL--DSKSASAHYNLGRALALQKKLDE------AIS 818

Query: 378 PRSQNITKNEKLAIKQLRENNDIIIRPADKGGKTVVMDKADYTQKMTSILNSNDYEIIPG 437
              Q I  +   A   +   N++        G      +A    +  + LN       P 
Sbjct: 819 CYRQAIALDPTFAKAHMNLGNEL--------GNQGKWAEAVACYETATQLN-------PK 863

Query: 438 DPTKTIEESEKYGNLENESGQKHAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFG 497
           D    I         +             +A A L  A  +DPN A ++Y  G       
Sbjct: 864 DAVPHISLGVALSKQDK----------LEEAVASLKRAISLDPNYATAHYNLGVALSKQD 913

Query: 498 QYEEALRNLDKTIALNPNFHVA 519
           + +EA+ +L +TIAL+PN+  A
Sbjct: 914 KLDEAVASLKRTIALDPNYATA 935



 Score = 44.7 bits (104), Expect = 0.14,   Method: Compositional matrix adjust.
 Identities = 44/199 (22%), Positives = 83/199 (41%), Gaps = 7/199 (3%)

Query: 145 VHLHAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNF 204
           + L     F +A A  + A  +DP    ++   G       + EEA       IAL+PN 
Sbjct: 703 IALKVQGKFGEAVASYERALTLDPKHVPAHCNLGGALMAQQKLEEANARFRAAIALDPNS 762

Query: 205 HVARAQRHFVVHKMIVPGDRERVEQSLKEFRNFVDTHSNVVEACTLFAQVLVDQEDFDGA 264
             A     + +       D+ +++++++  R  +   S    A     + L  Q+  D A
Sbjct: 763 APAHTGLGWALC------DQGKLDEAVESGRRAIALDSKSASAHYNLGRALALQKKLDEA 816

Query: 265 EEYFNRSIRVDPENASLYVHRAMLMLQARGNVDEAIKLIEKAISIDKSCMFAYETLGTIE 324
              + ++I +DP  A  +++     L  +G   EA+   E A  ++      + +LG   
Sbjct: 817 ISCYRQAIALDPTFAKAHMNLGN-ELGNQGKWAEAVACYETATQLNPKDAVPHISLGVAL 875

Query: 325 VQRGRLEEAVKCFNKALPL 343
            ++ +LEEAV    +A+ L
Sbjct: 876 SKQDKLEEAVASLKRAISL 894



 Score = 38.5 bits (88), Expect = 9.8,   Method: Compositional matrix adjust.
 Identities = 56/259 (21%), Positives = 109/259 (42%), Gaps = 36/259 (13%)

Query: 262 DGAEEYFNRSIRVDPENASLYVHRAM-LMLQARGNVDEAIKLIEKAISIDKSCMFAYETL 320
           D +  +   ++ + P++A+   H  + + L+ +G   EA+   E+A+++D   + A+  L
Sbjct: 678 DASVAFATAAVALRPQSAA--AHNVLGIALKVQGKFGEAVASYERALTLDPKHVPAHCNL 735

Query: 321 GTIEVQRGRLEEAVKCFNKALPLARDEAELSHIYSLRDAAIAQMKVCERYNIKKKVSPRS 380
           G   + + +LEEA   F  A+ L  + A  +H             +C++  + + V    
Sbjct: 736 GGALMAQQKLEEANARFRAAIALDPNSAP-AHTG-------LGWALCDQGKLDEAVESGR 787

Query: 381 QNITKNEKLAIKQLRENNDIIIRPADKGGKTVVMDKADYTQKMTSILNSNDYEIIPGDPT 440
           + I  + K A                       + +A   QK      S   + I  DPT
Sbjct: 788 RAIALDSKSASAHYN------------------LGRALALQKKLDEAISCYRQAIALDPT 829

Query: 441 KTIEESEKYGNLENESGQKHAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYE 500
                ++ + NL NE G +     + +A A  + A +++P  A  +   G       + E
Sbjct: 830 F----AKAHMNLGNELGNQ---GKWAEAVACYETATQLNPKDAVPHISLGVALSKQDKLE 882

Query: 501 EALRNLDKTIALNPNFHVA 519
           EA+ +L + I+L+PN+  A
Sbjct: 883 EAVASLKRAISLDPNYATA 901


>gi|269925204|ref|YP_003321827.1| hypothetical protein Tter_0083 [Thermobaculum terrenum ATCC BAA-798]
 gi|269788864|gb|ACZ41005.1| Tetratricopeptide TPR_2 repeat protein [Thermobaculum terrenum ATCC
            BAA-798]
          Length = 2240

 Score = 66.2 bits (160), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 106/491 (21%), Positives = 207/491 (42%), Gaps = 77/491 (15%)

Query: 55   DTNESHELDLLSKAKRAFEHEDYLTAIRHCTEEIESTSSNHTKALARLLRATVYIFTSQS 114
            DTN S+++ L S  +R  E++D    +  CT++   ++  H++         +Y+     
Sbjct: 1140 DTNVSYKVKLGSMLRRYGEYQDAEDLLLKCTDDHPESAQAHSEL------GMLYMDLGLQ 1193

Query: 115  TKAIE--DLTQLVEDTSVDPKIKVNAHIKRAVVHLHAASDFTKAFADLDEAEKVDPNVAD 172
             KA+   ++   ++D S + K +    +  A++HL     + +A   +  A + +P  A+
Sbjct: 1194 EKALRHHEIACSLDDRSPEYKYR----MALALIHL---KRYAEAIDTILTAIQANPEAAE 1246

Query: 173  SYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQRHF-VVHKMIVPGDRERVEQSL 231
             Y+  G+ +    QYEEA++  +K + + P+  VA+  R   + ++ I          + 
Sbjct: 1247 YYHALGRAHMGLSQYEEAVQAFEKAVRIAPS--VAQYHRDLGIAYRSI-----SEYGAAC 1299

Query: 232  KEFRNFVDTHSNVVEACTLFAQVLVDQEDFDGAEEYFNRSIRVDPENASLYVHRAMLMLQ 291
            +E    V    +V             +     A + F ++I + P    +Y+  A  +L+
Sbjct: 1300 QEIEEAVRISPDVAAWYNDLGICYERRGWLHEAVQAFEKAIELQP-GEPVYLSNAGNVLR 1358

Query: 292  ARGNVDEAIKLIEKAISIDKSCMFAYETLGTIEVQRGRLEEAVKCFNKALPLARDEAELS 351
             +   D A++ ++KAI +D +    Y  +  +    GR ++A   F +++ L+ D     
Sbjct: 1359 QQRKHDLALQHLQKAIELDSNFAEPYHQMALVMQDMGRFDDAYDLFQRSISLSPDNP--- 1415

Query: 352  HIYSLRDAAIAQMKVCERYNIKKKVSPRSQNITKNEKLAIKQLRENNDIIIRP------- 404
                             RY+    +  RSQ    +   AI Q+ +  DI  +P       
Sbjct: 1416 -----------------RYHYNLGILMRSQGDLHD---AINQVSKAIDI--QPNNAEWHS 1453

Query: 405  --ADKGGKTVVMDKADYTQKMTSILNSNDYEI-----IPGDPTKTIEES----------- 446
              AD   +  ++DKA    +  S L+ ++Y       +    T+ ++++           
Sbjct: 1454 TLADLYFQIGMLDKARKEAEEASRLDPDNYRYHRQLSVIARETQDLDQALASARQALKCA 1513

Query: 447  --EKYGNLENESGQKHAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALR 504
              E     E  S Q+ A  + T A A   +A  +DP  AD + + G IY   G+ +E+L+
Sbjct: 1514 PDEPQAIAELASVQE-ALGELTSALALYKQAAMLDPLNADYHRKIGSIYRQLGKTQESLQ 1572

Query: 505  NLDKTIALNPN 515
            +L K I L PN
Sbjct: 1573 SLQKAIDLAPN 1583



 Score = 63.2 bits (152), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 92/391 (23%), Positives = 163/391 (41%), Gaps = 52/391 (13%)

Query: 147  LHAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHV 206
            L A+  + +A A+ +EA +++P+ A   ++  ++    G+ EEA+  L   + L P  + 
Sbjct: 1885 LEASEQYEEALAEYNEAMQLNPDGAIYAFRAAEVCERMGKKEEAIECLKYALKLEPRNYE 1944

Query: 207  ARAQRHFVVHKMIVPGDRERVEQSLKEFRNFVDTHSNVVEACTLFAQVLVDQEDFDGAEE 266
             R    F +  M +  D E    + +E    ++      EA       L++ E +D A E
Sbjct: 1945 WR----FKLGCMYL--DMEYFAPAAEELAKSLEIEPESAEAHLKLGIALINLEQYDQALE 1998

Query: 267  YFNRSIRVDPENASLYVHRAMLMLQARGNVDEAIKLIEKAISIDKSCMFAYETLGTIEVQ 326
                + +++P N  ++   +++M +  G  +EAI  I +A+ +D S    Y   G +   
Sbjct: 1999 RLMDAAKIEPNNFDVHEQLSLVM-EKLGRPEEAISHIAQALLLDSSRADLYRRAGKLYAD 2057

Query: 327  RGRLEEAVKCFNKALPLARDEA----ELSHIYSLRDAAIAQMKVCERYNIKKKVSPRSQN 382
              RLEEA +   KAL L  D+A    EL  IY       AQ K      +K  +  + + 
Sbjct: 2058 MDRLEEAAQALEKALELDPDDAETHSELGLIYE------AQEK------LKLALGEQKEA 2105

Query: 383  ITKNEKLAIKQLRENNDIIIRPADKGGKTVVMDKADYTQKMTSILNSNDYEIIPGDPTKT 442
            I  + K  I +LR               ++      + + M ++  S D      DP   
Sbjct: 2106 IRLDPKNPIYELR-------------AASICRQLRWFEEAMAALERSLDL-----DP--- 2144

Query: 443  IEESEKYGNLENESGQKH-AASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEE 501
             E +  Y    NE G  + A  +   A    + A ++ P+ A  +   G +Y    +Y+ 
Sbjct: 2145 -ENAAAY----NERGMLYEAMGNLDAAREQYEIAVRLQPDEALYHRNLGVVYKKLKRYDL 2199

Query: 502  ALRNLDKTIALNPNFHVARAQRHFVWTSTLA 532
            A   L + + L P +  A A +     STL+
Sbjct: 2200 AASELRQAVKLRPGY--ADAYKELTTVSTLS 2228



 Score = 53.9 bits (128), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 47/181 (25%), Positives = 82/181 (45%), Gaps = 7/181 (3%)

Query: 169 NVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQRHFVVHKMIVPGDRERVE 228
           + A + ++ G IY + G+ ++AL        ++P+  V       V   +   GD +  E
Sbjct: 563 DCALTQHELGNIYKIQGRLQQALEQFQDAATMSPSSAVYLTSLGSV---LAACGDDQGAE 619

Query: 229 QSLKEFRNFVDTHSNVVEACTLFAQVLVDQEDFDGAEEYFNRSIRVDPENASLYVHRAML 288
              +E R  +D   N   A    A VL  Q   D A   + ++  + PE   LY   A  
Sbjct: 620 ---RELRRALDLDPNYAPAANELAAVLERQGKLDLALANYQKATEIQPEE-PLYHRNAGA 675

Query: 289 MLQARGNVDEAIKLIEKAISIDKSCMFAYETLGTIEVQRGRLEEAVKCFNKALPLARDEA 348
           +L+  G V+EA + +  AI +D     AY  LG++ +  G+   A++ F KA+  + ++ 
Sbjct: 676 ILRKLGRVEEAERELVTAIELDSKYADAYNELGSLYMDMGKHLAALENFQKAIQYSPEQP 735

Query: 349 E 349
           E
Sbjct: 736 E 736



 Score = 53.5 bits (127), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 98/465 (21%), Positives = 171/465 (36%), Gaps = 99/465 (21%)

Query: 130  VDPKIKVNAHIKRAVVHLHAASDFTK-AFADLDEAEKVDPNVADSYYQRGQIYCLFGQYE 188
            +DP   +NA   R +  ++     T+ +   L +A  + PN  DS ++ GQ+Y    +++
Sbjct: 1546 LDP---LNADYHRKIGSIYRQLGKTQESLQSLQKAIDLAPNAPDSLFEIGQLYLQTDRFD 1602

Query: 189  EALRNLDKTIALNPNFHVARAQRHFVVHKMIVPGDR-------------------ERVEQ 229
            EA + L K   L P+    R      + ++    D+                   E +E 
Sbjct: 1603 EACKVLQKATQLAPDNPTYRFHYGLAIMRLKEREDKLRSARLLASSSQVSYAQAIEEIEA 1662

Query: 230  SLKEFRNFVDTHSNVVEA-----------------------CTLF----AQVLVDQEDFD 262
            +L+   N  D H+ + E                        C LF     ++     D+D
Sbjct: 1663 ALRIEHNHADWHNTLGELYELVDDYESALHHFRWAADIDSDCALFQYNQGRIYKKLRDYD 1722

Query: 263  GAEEYFNRSIRVDPENASLYVHRAMLMLQARGNVDEAIKLIEKAISIDKSCMFAYETLGT 322
             A   F  ++R+DPE A  Y           GN  EA+   E+A+ I          LG+
Sbjct: 1723 RAIRAFQMAVRLDPEFAQAYSELGA-TYNMVGNHSEALINYERALQIRPDDGLTLRRLGS 1781

Query: 323  IEVQRGRLEEAVKCFNKALPLARDEAELSHIYSLRDAAIAQMK---VCERYNIKKKVSPR 379
               Q  R ++A+    KA  +   + E+ +   L  A  AQ K       +    K+ P 
Sbjct: 1782 TYRQMKRFKDAISILQKAAEIDPQDPEIYNELGL--AYRAQGKHREALAEFEHALKLRPD 1839

Query: 380  SQNITKNEKLAIKQLRENNDIIIRPADKGGKTVVMDKADYTQKMTSILNSNDYEIIPGDP 439
            +    +N  +A + L++    I    +K    V+++                    P  P
Sbjct: 1840 NATYNRNAAIAHQDLKQTKLAI----EKLQHAVMLE--------------------PYQP 1875

Query: 440  TKTIEESEKYGNLENESGQKHAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQY 499
            T   E     G L   S Q      + +A A+ +EA +++P+ A   ++  ++    G+ 
Sbjct: 1876 TWHFE----LGALLEASEQ------YEEALAEYNEAMQLNPDGAIYAFRAAEVCERMGKK 1925

Query: 500  EEALRNLDKTIALNPNFHVARAQRHFVWTSTLAELMAFSDEFMIP 544
            EEA+  L   + L P        R++ W   L   M    E+  P
Sbjct: 1926 EEAIECLKYALKLEP--------RNYEWRFKLG-CMYLDMEYFAP 1961



 Score = 53.1 bits (126), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 75/373 (20%), Positives = 154/373 (41%), Gaps = 26/373 (6%)

Query: 145  VHLHAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNF 204
            + + +  D   A   + +A  + PN A+ +     +Y   G  ++A +  ++   L+P+ 
Sbjct: 1423 ILMRSQGDLHDAINQVSKAIDIQPNNAEWHSTLADLYFQIGMLDKARKEAEEASRLDPDN 1482

Query: 205  HVARAQRHFVVHKMIVPGDRERVEQSLKEFRNFVDTHSNVVEACTLFAQVLVDQEDFDGA 264
            +  R  R   V    +  + + ++Q+L   R  +    +  +A    A V     +   A
Sbjct: 1483 Y--RYHRQLSV----IARETQDLDQALASARQALKCAPDEPQAIAELASVQEALGELTSA 1536

Query: 265  EEYFNRSIRVDPENASLYVHRAMLMLQARGNVDEAIKLIEKAISIDKSCMFAYETLGTIE 324
               + ++  +DP NA  Y  +   + +  G   E+++ ++KAI +  +   +   +G + 
Sbjct: 1537 LALYKQAAMLDPLNAD-YHRKIGSIYRQLGKTQESLQSLQKAIDLAPNAPDSLFEIGQLY 1595

Query: 325  VQRGRLEEAVKCFNKALPLARDEAELSHIYSLRDAAIAQMKVCERYNIKKKVSPRSQNIT 384
            +Q  R +EA K   KA  LA D       Y L     A M++ ER +  K  S R   + 
Sbjct: 1596 LQTDRFDEACKVLQKATQLAPDNPTYRFHYGL-----AIMRLKERED--KLRSARL--LA 1646

Query: 385  KNEKLAIKQLRENNDIIIRPADKGGKTVVMDKADYTQKMTSILN-SNDYEIIPGDPTKTI 443
             + +++  Q  E  +  +R        +  + AD+   +  +    +DYE          
Sbjct: 1647 SSSQVSYAQAIEEIEAALR--------IEHNHADWHNTLGELYELVDDYESALHHFRWAA 1698

Query: 444  EESEKYGNLENESGQKHAA-SDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEA 502
            +        +   G+ +    D+ +A      A ++DP  A +Y + G  Y + G + EA
Sbjct: 1699 DIDSDCALFQYNQGRIYKKLRDYDRAIRAFQMAVRLDPEFAQAYSELGATYNMVGNHSEA 1758

Query: 503  LRNLDKTIALNPN 515
            L N ++ + + P+
Sbjct: 1759 LINYERALQIRPD 1771



 Score = 51.2 bits (121), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 90/395 (22%), Positives = 160/395 (40%), Gaps = 66/395 (16%)

Query: 168  PNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNF-----HVARAQRHFVVHKMIVPG 222
            P  A  + + G I  + G Y++A     K   L+P       H+ +A R+       +  
Sbjct: 902  PESALIHDELGTIEFVRGNYQKASECFLKATKLSPETSDFWAHLGKAYRYLTR----LDE 957

Query: 223  DRERVEQSLKEFRNFVDTHSNVVEACTLFAQVLVDQEDFDGAEEYFNRSIRVDPENASLY 282
             +E  E++L+     +D ++ V    T  A +L+   + + A  +F ++ R+D  NA  Y
Sbjct: 958  AKEACEEALR-----LDANNPVAHHET--AMLLIALNEEEEALSHFRKAARLDARNAQ-Y 1009

Query: 283  VHRAMLMLQARGNVDEAIKLIEKAISIDKSCMFAYETLGTIEVQRGRLEEAVKCFNKALP 342
                       G V+E +  +EKA+S+D +   A+  LG +   RG+ EEA+  F  +L 
Sbjct: 1010 ALDLGACASKLGRVNEGLTWLEKALSLDPNNGQAHAELGMLMGSRGQWEEALAHFRASLL 1069

Query: 343  LARDEAELSHIYSL----RDAAIAQMKVCERYNIKKKVSPRSQN--ITKNEKLAIKQLRE 396
            +     +  H+Y +     DA    +K  ER      + PR  +  +T  E L I   R+
Sbjct: 1070 IDEQNVDYLHMYGIACLHTDATEDAIKTLER---ALALDPRRADVYVTYAEALEIAGKRD 1126

Query: 397  NNDIIIRPADKGGKTVVMDKADYTQKMTSILNS----NDYEII----PGDPTKTIEESEK 448
                 ++ A +   T V     Y  K+ S+L       D E +      D  ++ +   +
Sbjct: 1127 EAIQNLQEAVRLDDTNV----SYKVKLGSMLRRYGEYQDAEDLLLKCTDDHPESAQAHSE 1182

Query: 449  YGNLENESGQKHAASDFTKAFADLDE-------------------AEKVD---------P 480
             G L  + G +  A    +    LD+                   AE +D         P
Sbjct: 1183 LGMLYMDLGLQEKALRHHEIACSLDDRSPEYKYRMALALIHLKRYAEAIDTILTAIQANP 1242

Query: 481  NVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPN 515
              A+ Y+  G+ +    QYEEA++  +K + + P+
Sbjct: 1243 EAAEYYHALGRAHMGLSQYEEAVQAFEKAVRIAPS 1277



 Score = 48.1 bits (113), Expect = 0.012,   Method: Compositional matrix adjust.
 Identities = 51/242 (21%), Positives = 102/242 (42%), Gaps = 16/242 (6%)

Query: 105 ATVYIFTSQSTKAIEDLTQLVEDTSVDPKIKVNAHIKRAVVHLHAASDFTKAFADLDEAE 164
            ++Y+   +   A+E+  + ++ +   P+     +++  + +  A     KA   L  A 
Sbjct: 708 GSLYMDMGKHLAALENFQKAIQYSPEQPEY----YLQMGLTY-RALKQPAKAITALQIAL 762

Query: 165 KVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQRHFVVHKMIVPGDR 224
            +DP   +      + YC  G+  EA+      I L+           ++++  IV    
Sbjct: 763 SMDPKDLNKRAILAETYCQSGRLTEAIEEYRWAIELSGGMP------QYLLNAAIVQRKA 816

Query: 225 ERVEQSLKEFRNFVDTHSNVVEACTLFAQVLVDQEDFDGAEEYFNRSIRVDPENASLYVH 284
             +E + +  +  +  +  +  A      V   + D+  A E + +++ + P+N    V 
Sbjct: 817 GMLEDAEESLKKVIQNNPGLAPAYFELGMVAEQKGDYILALERYRKALELSPDNEHFIV- 875

Query: 285 RAMLMLQAR--GNVDEAIKLIEKAISIDKSCMFAYETLGTIEVQRGRLEEAVKCFNKALP 342
              +   AR  GN+ +A +LI  A S        ++ LGTIE  RG  ++A +CF KA  
Sbjct: 876 --AVSRSARLSGNLLQADELIRDAFSRMPESALIHDELGTIEFVRGNYQKASECFLKATK 933

Query: 343 LA 344
           L+
Sbjct: 934 LS 935



 Score = 45.4 bits (106), Expect = 0.080,   Method: Compositional matrix adjust.
 Identities = 56/249 (22%), Positives = 106/249 (42%), Gaps = 24/249 (9%)

Query: 101  RLLRATVYIFTSQSTKAIEDLTQLVEDTSVDPKIKVNAHIKRAVVHLHAASDFTKAFADL 160
            R + A  Y  + + T+AIE+    +E +   P+  +NA I +       A     A   L
Sbjct: 772  RAILAETYCQSGRLTEAIEEYRWAIELSGGMPQYLLNAAIVQ-----RKAGMLEDAEESL 826

Query: 161  DEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQRHFVVHKMIV 220
             +  + +P +A +Y++ G +    G Y  AL    K + L+P+        HF+V     
Sbjct: 827  KKVIQNNPGLAPAYFELGMVAEQKGDYILALERYRKALELSPD------NEHFIV----A 876

Query: 221  PGDRERVEQSLKEFRNFV-DTHSNVVEACTL---FAQVLVDQEDFDGAEEYFNRSIRVDP 276
                 R+  +L +    + D  S + E+  +      +   + ++  A E F ++ ++ P
Sbjct: 877  VSRSARLSGNLLQADELIRDAFSRMPESALIHDELGTIEFVRGNYQKASECFLKATKLSP 936

Query: 277  ENASLYVH--RAMLMLQARGNVDEAIKLIEKAISIDKSCMFAYETLGTIEVQRGRLEEAV 334
            E +  + H  +A   L     +DEA +  E+A+ +D +   A+     + +     EEA+
Sbjct: 937  ETSDFWAHLGKAYRYLT---RLDEAKEACEEALRLDANNPVAHHETAMLLIALNEEEEAL 993

Query: 335  KCFNKALPL 343
              F KA  L
Sbjct: 994  SHFRKAARL 1002



 Score = 44.3 bits (103), Expect = 0.19,   Method: Compositional matrix adjust.
 Identities = 81/378 (21%), Positives = 149/378 (39%), Gaps = 46/378 (12%)

Query: 143  AVVHLHAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNP 202
            A +H  A  D  K    L+ A  +DP  AD Y    +   + G+ +EA++NL + + L+ 
Sbjct: 1084 ACLHTDATEDAIKT---LERALALDPRRADVYVTYAEALEIAGKRDEAIQNLQEAVRLDD 1140

Query: 203  NFHVARAQRHFVVHKMIVPGDRERVEQSLKEFRNFVDTHSNVVEACTLFAQVLVDQEDFD 262
                 + +   ++ +    G+ +  E  L +     D H    +A +    + +D    +
Sbjct: 1141 TNVSYKVKLGSMLRRY---GEYQDAEDLLLK---CTDDHPESAQAHSELGMLYMDLGLQE 1194

Query: 263  GAEEYFNRSIRVDPENASLYVHRAMLMLQARGNVDEAIKLIEKAISIDKSCMFAYETLGT 322
             A  +   +  +D + +  Y +R  L L       EAI  I  AI  +      Y  LG 
Sbjct: 1195 KALRHHEIACSLD-DRSPEYKYRMALALIHLKRYAEAIDTILTAIQANPEAAEYYHALGR 1253

Query: 323  IEVQRGRLEEAVKCFNKALPLARDEAELSHIYSLRDAAIAQMKVCERYNIKKKVSPRSQN 382
              +   + EEAV+ F KA+ +A   A+       RD  IA   + E            Q 
Sbjct: 1254 AHMGLSQYEEAVQAFEKAVRIAPSVAQYH-----RDLGIAYRSISE-------YGAACQE 1301

Query: 383  ITKNEKLAIKQLRENNDIIIRPADKGGKTVVMDKADYTQKMTSILNSNDYEIIPGDPTKT 442
            I +  +++       ND+           +  ++  +  +          E+ PG+P   
Sbjct: 1302 IEEAVRISPDVAAWYNDL----------GICYERRGWLHEAVQAFEKA-IELQPGEPVYL 1350

Query: 443  IEESEKYGNLENESGQKHAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEA 502
                   GN+  +  +KH       A   L +A ++D N A+ Y+Q   +    G++++A
Sbjct: 1351 ----SNAGNVLRQQ-RKH-----DLALQHLQKAIELDSNFAEPYHQMALVMQDMGRFDDA 1400

Query: 503  LRNLDKTIAL---NPNFH 517
                 ++I+L   NP +H
Sbjct: 1401 YDLFQRSISLSPDNPRYH 1418



 Score = 40.0 bits (92), Expect = 2.9,   Method: Compositional matrix adjust.
 Identities = 73/382 (19%), Positives = 162/382 (42%), Gaps = 16/382 (4%)

Query: 153  FTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQRH 212
            F  A + L +A ++DP   + Y + G  Y   G++ EAL   +  + L P+ +    +  
Sbjct: 1789 FKDAISILQKAAEIDPQDPEIYNELGLAYRAQGKHREALAEFEHALKLRPD-NATYNRNA 1847

Query: 213  FVVHKMIVPGDRERVEQSLKEFRNFVDTHSNVVEACTLFAQVLVDQEDFDGAEEYFNRSI 272
             + H+     D ++ + ++++ ++ V               +L   E ++ A   +N ++
Sbjct: 1848 AIAHQ-----DLKQTKLAIEKLQHAVMLEPYQPTWHFELGALLEASEQYEEALAEYNEAM 1902

Query: 273  RVDPENASLYVHRAMLMLQARGNVDEAIKLIEKAISIDKSCMFAYETLGTIEVQRGRLEE 332
            +++P+ A +Y  RA  + +  G  +EAI+ ++ A+ ++         LG + +       
Sbjct: 1903 QLNPDGA-IYAFRAAEVCERMGKKEEAIECLKYALKLEPRNYEWRFKLGCMYLDMEYFAP 1961

Query: 333  AVKCFNKALPLARDEAELSHIYSLRDAAIAQM-KVCERYNIKKKVSPRSQNITKNEKLAI 391
            A +   K+L +  + AE      +    + Q  +  ER     K+ P + ++ +   L +
Sbjct: 1962 AAEELAKSLEIEPESAEAHLKLGIALINLEQYDQALERLMDAAKIEPNNFDVHEQLSLVM 2021

Query: 392  KQLRENNDIIIRPADKGGKTVVMD--KADYTQKMTSILNSND-YEIIPGDPTKTIEESEK 448
            ++L    + I   A    + +++D  +AD  ++   +    D  E       K +E    
Sbjct: 2022 EKLGRPEEAISHIA----QALLLDSSRADLYRRAGKLYADMDRLEEAAQALEKALELDPD 2077

Query: 449  YGNLENESGQKHAASDFTK-AFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLD 507
                 +E G  + A +  K A  +  EA ++DP       +   I      +EEA+  L+
Sbjct: 2078 DAETHSELGLIYEAQEKLKLALGEQKEAIRLDPKNPIYELRAASICRQLRWFEEAMAALE 2137

Query: 508  KTIALNPNFHVARAQRHFVWTS 529
            +++ L+P    A  +R  ++ +
Sbjct: 2138 RSLDLDPENAAAYNERGMLYEA 2159


>gi|300868094|ref|ZP_07112731.1| tetratricopeptide TPR_2 [Oscillatoria sp. PCC 6506]
 gi|300333932|emb|CBN57909.1| tetratricopeptide TPR_2 [Oscillatoria sp. PCC 6506]
          Length = 558

 Score = 66.2 bits (160), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 54/211 (25%), Positives = 101/211 (47%), Gaps = 9/211 (4%)

Query: 155 KAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQRHFV 214
           +A    D+A K++ +   ++Y RG +     +Y+EA+ + D+   + P+FH+A   R  +
Sbjct: 295 EALLAFDKAIKINSDFYPAWYGRGNVLASMERYQEAIASYDRATKIKPDFHLAWRDRGAL 354

Query: 215 VHKMIVPGDRERVEQSLKEFRNFVDTHSNVVEACTLFAQVLVDQEDFDGAEEYFNRSIRV 274
           +    +  DRE +    +  +   D +        L A  L   ED   A   ++++IR+
Sbjct: 355 L--AFLKQDREALASFDRALQFKPDDYVAWYIRGDLLAGNLQRYED---AIASYDQAIRI 409

Query: 275 DPENASLYVHRAMLMLQARGNVDEAIKLIEKAISIDKSCMFAYETLGTIEVQRGRLEEAV 334
            P+ A  +  R   +   R    +AI  ++KAI ID     A+   GT+ ++  R  EAV
Sbjct: 410 KPDFAPAWTGRGEALYDLR-RYQDAIASLDKAIQIDPKQGEAWTLKGTLLLELERYSEAV 468

Query: 335 KCFNKALPLARDEAELSHIYSLRDAAIAQMK 365
             ++ ++ +A D  +L   + LR AA+  +K
Sbjct: 469 LAYDLSIAIAPDNYQL---WMLRAAALVGLK 496


>gi|304315338|ref|YP_003850485.1| tetratricopeptide repeat domain-containing protein
           [Methanothermobacter marburgensis str. Marburg]
 gi|302588797|gb|ADL59172.1| tetratricopeptide repeat domain-containing protein
           [Methanothermobacter marburgensis str. Marburg]
          Length = 386

 Score = 66.2 bits (160), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 76/346 (21%), Positives = 148/346 (42%), Gaps = 48/346 (13%)

Query: 185 GQYEEALRNLDKTIALNPNFHVARAQRHFVVHKMIVPGDRERVEQSLKEFRNFVDTHSNV 244
           G+Y+EAL+   K +  +PN           + K+      +R E++L+ +   +  +  +
Sbjct: 30  GKYKEALKEFRKALKASPNDPEILHYNAMTLLKL------KRPEKALECYEKILKNNPKL 83

Query: 245 VEACTLFAQVLVDQEDFDGAEEYFNRSIRVDPENASLYVHRAMLMLQARGNVDEAIKLIE 304
            EA      VL + + +D A E + R++++DPE+   + ++  L L   G  ++AI+  E
Sbjct: 84  AEAWNNKGVVLKELKRYDEALECYERALQIDPEDDGTWNNKGAL-LDTIGKPEKAIECYE 142

Query: 305 KAISIDKSCMFAYETLGTIEVQRGRLEEAVKCFNKALPLARDEAELSHIYSLRDAAIAQM 364
           KA+ I++    A+   G      G+ EEA++C+ KAL +    AE    +  +   + ++
Sbjct: 143 KALEINQKNAKAWYNKGNGLRSLGKYEEALECYEKALQI---NAEFVEAWYNKALILEEL 199

Query: 365 KVCERYNIKKKVSPRSQNITKNEKLAIKQLRENNDIIIRPADKG---GKTVVMDKADYTQ 421
           K   RY+   +   R+                   + I P D G    K  ++D     +
Sbjct: 200 K---RYDEALECYERA-------------------LQIDPEDDGTWNNKGALLDTIGKPE 237

Query: 422 KMTSILNSNDYEIIPGDPTKTIEESEKYGNLENESGQK-HAASDFTKAFADLDEAEKVDP 480
           K         YE       K +E ++K     N  G        + +A    ++A +++ 
Sbjct: 238 KAIEC-----YE-------KALEINQKNAKAWNNKGVVLEELKRYDEALECYEKALEINL 285

Query: 481 NVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQRHFV 526
              +++  +G +    G+YEEAL   +K + +NP F  A   +  +
Sbjct: 286 ENDETWANKGVLLRKLGKYEEALECFEKALEINPEFADAWKWKGII 331



 Score = 63.9 bits (154), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 53/237 (22%), Positives = 116/237 (48%), Gaps = 12/237 (5%)

Query: 105 ATVYIFTSQSTKAIEDLTQLVEDTSVDPKIKVNAHIKRAVVHLHAASDFTKAFADLDEAE 164
           A   +   +  KA+E   +++++   +PK+   A   + VV L     + +A    + A 
Sbjct: 57  AMTLLKLKRPEKALECYEKILKN---NPKL-AEAWNNKGVV-LKELKRYDEALECYERAL 111

Query: 165 KVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQRHFVVHKMIVPGDR 224
           ++DP    ++  +G +    G+ E+A+   +K + +N     A   +   +  +      
Sbjct: 112 QIDPEDDGTWNNKGALLDTIGKPEKAIECYEKALEINQKNAKAWYNKGNGLRSL------ 165

Query: 225 ERVEQSLKEFRNFVDTHSNVVEACTLFAQVLVDQEDFDGAEEYFNRSIRVDPENASLYVH 284
            + E++L+ +   +  ++  VEA    A +L + + +D A E + R++++DPE+   + +
Sbjct: 166 GKYEEALECYEKALQINAEFVEAWYNKALILEELKRYDEALECYERALQIDPEDDGTWNN 225

Query: 285 RAMLMLQARGNVDEAIKLIEKAISIDKSCMFAYETLGTIEVQRGRLEEAVKCFNKAL 341
           +  L L   G  ++AI+  EKA+ I++    A+   G +  +  R +EA++C+ KAL
Sbjct: 226 KGAL-LDTIGKPEKAIECYEKALEINQKNAKAWNNKGVVLEELKRYDEALECYEKAL 281


>gi|300869588|ref|ZP_07114169.1| putative Serine/threonine protein kinase with TPR repeats
           [Oscillatoria sp. PCC 6506]
 gi|300332456|emb|CBN59369.1| putative Serine/threonine protein kinase with TPR repeats
           [Oscillatoria sp. PCC 6506]
          Length = 774

 Score = 65.9 bits (159), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 58/224 (25%), Positives = 100/224 (44%), Gaps = 12/224 (5%)

Query: 94  NHTKALARLLRATVYIFTSQSTKAIEDLTQLVEDTSVDPKIKVNAHIKRAVVHLHAASDF 153
           N   A A   RA  +       +AI+D TQ ++   VDP   V A+  R + +     D 
Sbjct: 416 NSRDAEAYYKRANTHYDLGAYQQAIQDYTQAIQ---VDPN-NVKAYYNRGLAYTDI-EDR 470

Query: 154 TKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQRHF 213
             A  D  +  +++PN A++YYQR   Y   G Y+ A+ +  + I LNPN   + + R  
Sbjct: 471 RSAVQDFTQVIRLNPNDAEAYYQRALGYYELGDYKTAIEDYTQAIRLNPNDAKSYSNRGL 530

Query: 214 VVHKMIVPGDRERVEQSLKEFRNFVDTHSNVVEACTLFAQVLVDQEDFDGAEEYFNRSIR 273
                   GD+   + ++ +F   ++ +           +   +  D+ GA E ++++I 
Sbjct: 531 ARS---AAGDK---QGAMSDFTQAIELNPKQASVYYSRGRARFNLADYKGAMEDYSQAIV 584

Query: 274 VDPENASLYVHRAMLMLQARGNVDEAIKLIEKAISIDKSCMFAY 317
           +DP  A  Y +R    L      D+AI+   +AI++D     AY
Sbjct: 585 LDPNQADAYTNRCSAYLNL-ATYDKAIEDCTQAIALDPKNAEAY 627



 Score = 65.1 bits (157), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 83/380 (21%), Positives = 155/380 (40%), Gaps = 48/380 (12%)

Query: 151 SDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQ 210
            D   A AD  +A  ++   A++YY+R   +   G Y++A+++  + I ++PN   A   
Sbjct: 400 GDKAGAIADYTQAIGLNSRDAEAYYKRANTHYDLGAYQQAIQDYTQAIQVDPNNVKAYYN 459

Query: 211 RHFVVHKMIVPGDRERVEQSLKEFRNFVDTHSNVVEACTLFAQVLVDQEDFDGAEEYFNR 270
           R           D E    ++++F   +  + N  EA    A    +  D+  A E + +
Sbjct: 460 RGLAYT------DIEDRRSAVQDFTQVIRLNPNDAEAYYQRALGYYELGDYKTAIEDYTQ 513

Query: 271 SIRVDPENASLYVHRAMLMLQARGNVDEAIKLIEKAISIDKSCMFAYETLGTIEVQRGRL 330
           +IR++P +A  Y +R  L   A G+   A+    +AI ++      Y + G         
Sbjct: 514 AIRLNPNDAKSYSNRG-LARSAAGDKQGAMSDFTQAIELNPKQASVYYSRGRARFNLADY 572

Query: 331 EEAVKCFNKALPLARDEAELSHIYSLRDAAIAQMKVCERYNIKKKVSPRSQNITKNEKLA 390
           + A++ +++A+ L  ++A+    Y+ R +A   +   +     K +   +Q I  + K A
Sbjct: 573 KGAMEDYSQAIVLDPNQADA---YTNRCSAYLNLATYD-----KAIEDCTQAIALDPKNA 624

Query: 391 IKQLRENNDIIIRPADKGGKTVVMDKADYTQKMTSILNSNDYEIIPGDPTKTIEESEKYG 450
                                       Y  +  + LN  DY+    D + TI  +   G
Sbjct: 625 --------------------------EAYNNRCIARLNLGDYQKASEDCSLTIGIT---G 655

Query: 451 N----LENESGQKHAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNL 506
           N      N    + A  D   A  D  +A +++P+ A +Y  RG +Y     Y  A+ + 
Sbjct: 656 NNPKAFSNRGLARSAIGDKQGAIEDFSQAIRLNPSDAVAYSNRGIVYSEIKNYGSAIEDF 715

Query: 507 DKTIALNPNFHVARAQRHFV 526
            ++I L+PN   A   R  +
Sbjct: 716 AQSIRLSPNNATAYYSRGII 735



 Score = 48.5 bits (114), Expect = 0.009,   Method: Compositional matrix adjust.
 Identities = 81/369 (21%), Positives = 146/369 (39%), Gaps = 56/369 (15%)

Query: 168 PNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPN---FHVARAQRHFVVHKMIVPGDR 224
           P  A  +Y+R       G    A+ +  + I LN      +  RA  H+         D 
Sbjct: 383 PARAKEFYERAVQKAKQGDKAGAIADYTQAIGLNSRDAEAYYKRANTHY---------DL 433

Query: 225 ERVEQSLKEFRNFVDTHSNVVEACTLFAQVLVDQEDFDGAEEYFNRSIRVDPENASLYVH 284
              +Q+++++   +    N V+A         D ED   A + F + IR++P +A  Y  
Sbjct: 434 GAYQQAIQDYTQAIQVDPNNVKAYYNRGLAYTDIEDRRSAVQDFTQVIRLNPNDAEAYYQ 493

Query: 285 RAMLMLQARGNVDEAIKLIEKAISIDKSCMFAYETLGTIEVQRGRLEEAVKCFNKALPLA 344
           RA+   +  G+   AI+   +AI ++ +   +Y   G      G  + A+  F +A+ L 
Sbjct: 494 RALGYYEL-GDYKTAIEDYTQAIRLNPNDAKSYSNRGLARSAAGDKQGAMSDFTQAIELN 552

Query: 345 RDEAELSHIYSLRDAAIAQMKVCERYNIKKKVSPRSQNITKNEKLAIKQLRENNDIIIRP 404
             +A    +Y  R  A        R+N+             + K A++   +   I++ P
Sbjct: 553 PKQAS---VYYSRGRA--------RFNLA------------DYKGAMEDYSQA--IVLDP 587

Query: 405 ADKGGKTVVMDKAD-YTQKMTSILNSNDYEIIPGDPTKTI----EESEKYGNLENESGQK 459
                     ++AD YT + ++ LN   Y+    D T+ I    + +E Y    N    +
Sbjct: 588 ----------NQADAYTNRCSAYLNLATYDKAIEDCTQAIALDPKNAEAY---NNRCIAR 634

Query: 460 HAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVA 519
               D+ KA  D      +  N   ++  RG      G  + A+ +  + I LNP+  VA
Sbjct: 635 LNLGDYQKASEDCSLTIGITGNNPKAFSNRGLARSAIGDKQGAIEDFSQAIRLNPSDAVA 694

Query: 520 RAQRHFVWT 528
            + R  V++
Sbjct: 695 YSNRGIVYS 703



 Score = 44.3 bits (103), Expect = 0.16,   Method: Compositional matrix adjust.
 Identities = 37/146 (25%), Positives = 62/146 (42%), Gaps = 16/146 (10%)

Query: 77  YLTAIRHCTEEIESTSSN----HTKALARLLRATVYIFTSQSTKAIEDLTQLVEDTSVDP 132
           Y  AI  CT+ I     N    + + +ARL             KA ED +  +  T  +P
Sbjct: 606 YDKAIEDCTQAIALDPKNAEAYNNRCIARL-------NLGDYQKASEDCSLTIGITGNNP 658

Query: 133 KIKVNAHIKRAVVHLHAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALR 192
           K   N  + R+ +      D   A  D  +A +++P+ A +Y  RG +Y     Y  A+ 
Sbjct: 659 KAFSNRGLARSAI-----GDKQGAIEDFSQAIRLNPSDAVAYSNRGIVYSEIKNYGSAIE 713

Query: 193 NLDKTIALNPNFHVARAQRHFVVHKM 218
           +  ++I L+PN   A   R  +  ++
Sbjct: 714 DFAQSIRLSPNNATAYYSRGIIRREL 739


>gi|196006521|ref|XP_002113127.1| hypothetical protein TRIADDRAFT_56979 [Trichoplax adhaerens]
 gi|190585168|gb|EDV25237.1| hypothetical protein TRIADDRAFT_56979 [Trichoplax adhaerens]
          Length = 1437

 Score = 65.9 bits (159), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 97/443 (21%), Positives = 196/443 (44%), Gaps = 62/443 (13%)

Query: 116 KAIEDLTQLVEDTSVDPKIKVNAHIKRAVVHLHA-ASDFTKAFADLDEAEKVD------- 167
           K+I+ L     D    P+I   A I R +  ++     +  A + + ++ K+D       
Sbjct: 569 KSIKVLLTKFGDNCNHPRI---ARIYRNIGEVYTDQGKYDDAVSMISKSIKIDLTKLGDN 625

Query: 168 -PNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQRHFVVHKMIVPGDR-- 224
            P++A++Y + G +Y   G+Y++AL  L K++ +     +++A ++++   + +  DR  
Sbjct: 626 HPSIANTYGELGHVYKNQGKYDDALSALYKSLKI----KLSQAGKNYL--SISLTYDRIG 679

Query: 225 -------------ERVEQSLK-EFRNFVDTHSNVVEACTLFAQVLVDQEDFDGAEEYFNR 270
                          + +SLK     F + H N+V      A+V   Q  +D A   FN+
Sbjct: 680 QVYHCQGKCDEALSMLNKSLKLNLTRFANNHPNIVSLHNKIARVYNQQAKYDDALSIFNK 739

Query: 271 SIRV--------DPENASLYVHRAMLMLQARGNVDEAIKLIEKAISI--------DKSCM 314
           S+++         P  A++Y     +    +G  D+A+ +  K++ I          S  
Sbjct: 740 SLKLILTRLGNNHPRTAAIYRDIGQVY-NDQGKYDDALSVYNKSLKIILTKLDDNHPSIA 798

Query: 315 FAYETLGTIEVQRGRLEEAVKCFNKALPLARDEAELSHIYSLRDAAIAQMKVCERYNIKK 374
             Y+ +G +  ++G+ ++A+   NK+L +       +H    +  AI    + + YN + 
Sbjct: 799 STYDNIGLVYNKQGKYDDALSVHNKSLKIKLTRLGDNH----QSIAITYRNIGQVYNDQG 854

Query: 375 KVSPRSQNITKNEKLAIKQLRENNDIIIRPADKGGKTVVMDKADYTQKMTSILNSNDYEI 434
           K         K+ K+ IKQL  N+  I    +K G+ V  ++  Y   + S+ N +    
Sbjct: 855 KHDEALSMFNKSLKITIKQLGNNHPSIANTYNKIGQ-VYNNQGKYDDAL-SVYNKSLKIT 912

Query: 435 IP--GDPTKTIEES-EKYGNLENESGQ-KHAASDFTKAFA-DLDEAEKVDPNVADSYYQR 489
           +   GD    I ++    G + N+ G+   A S + K+    L + +   P++A +Y   
Sbjct: 913 LTRLGDNHPNITKTYGDIGQVYNDQGKYDDALSVYNKSLKITLTKFDDNHPSIAKTYDNI 972

Query: 490 GQIYCLFGQYEEALRNLDKTIAL 512
           G +Y   G+Y++AL   +K++ +
Sbjct: 973 GLVYNKQGKYDDALSVHNKSLKI 995



 Score = 54.7 bits (130), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 77/369 (20%), Positives = 156/369 (42%), Gaps = 42/369 (11%)

Query: 168  PNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQRHFVVHKMI--VPGDRE 225
            P++A +Y   G +Y   G+Y++AL   +K++ +         Q   + ++ I  V  D+ 
Sbjct: 795  PSIASTYDNIGLVYNKQGKYDDALSVHNKSLKIKLTRLGDNHQSIAITYRNIGQVYNDQG 854

Query: 226  RVEQSLKEF--------RNFVDTHSNVVEACTLFAQVLVDQEDFDGAEEYFNRSIRVD-- 275
            + +++L  F        +   + H ++        QV  +Q  +D A   +N+S+++   
Sbjct: 855  KHDEALSMFNKSLKITIKQLGNNHPSIANTYNKIGQVYNNQGKYDDALSVYNKSLKITLT 914

Query: 276  ------PENASLYVHRAMLMLQARGNVDEAIKLIEKAISID--------KSCMFAYETLG 321
                  P     Y     +    +G  D+A+ +  K++ I          S    Y+ +G
Sbjct: 915  RLGDNHPNITKTYGDIGQVY-NDQGKYDDALSVYNKSLKITLTKFDDNHPSIAKTYDNIG 973

Query: 322  TIEVQRGRLEEAVKCFNKALPLARDEAELSHIYSLRDAAIAQMKVCERYNIKKKVSPRSQ 381
             +  ++G+ ++A+   NK+L +       +H    +  AI    + + YN + K +    
Sbjct: 974  LVYNKQGKYDDALSVHNKSLKIKLTRLGDNH----QSIAITYRNIGQVYNDQGKYNEALS 1029

Query: 382  NITKNEKLAIKQLRENNDIIIRPADKGGKTVVMDKADYTQKMTSILNSNDYEIIP--GDP 439
               K+ K+ IKQL  N+  I    +K G+  + ++        SI N +    +   GD 
Sbjct: 1030 MFNKSLKITIKQLGNNHPSIANTYNKIGQ--IYNRQGKYDDALSIHNKSLKITLTRLGDN 1087

Query: 440  TKTIEESEKYGNL----ENESGQKHAASDFTKAFA-DLDEAEKVDPNVADSYYQRGQIYC 494
               I  +  YG++     N+     A S + K+    L +     P++A++Y   GQ+Y 
Sbjct: 1088 HPNIANT--YGSIGQVYNNQGKYDDALSVYNKSLKITLTKLGDNHPSIANTYDNIGQVYN 1145

Query: 495  LFGQYEEAL 503
               +Y++AL
Sbjct: 1146 RQDKYDDAL 1154



 Score = 46.2 bits (108), Expect = 0.040,   Method: Compositional matrix adjust.
 Identities = 94/419 (22%), Positives = 175/419 (41%), Gaps = 64/419 (15%)

Query: 121 LTQLVEDTSVDPKIKVN-AHIKRAVVHLHAASDFTKAFADLDEAEKVD--------PNVA 171
           LTQL E+    P I +  ++I +   HL     + +A + L+++ K+         P++A
Sbjct: 108 LTQLDEN---HPSIAITYSNIGQVYKHL---DKYDEALSMLNKSLKITLTKLSNNHPSIA 161

Query: 172 DSYYQRGQIYCLFGQYEEALRNLDKTIALN---PNFH---VARAQRHF--VVHKMIVPGD 223
           ++Y   GQ+Y   G+Y++AL   +K++ +    PN +   +A   R    V +      D
Sbjct: 162 NTYNNIGQVYNRQGKYDDALSIHNKSLKITLTRPNGNHSIIANTYRDIGQVYNNQGKYDD 221

Query: 224 RERV-EQSLK-EFRNFVDTHSNVVEACTLFAQVLVDQEDFDGAEEYFNRSIRVDPENASL 281
              V  +SLK       D H ++        QV   Q  +D A   FN+S++        
Sbjct: 222 ALSVYNKSLKITLTKLGDNHPSIANIYDKIGQVYCHQGKYDDALPVFNKSLKTQ------ 275

Query: 282 YVHRAMLMLQARGNVDEAIKLIEKAISIDKSCMFAYETLGTIEVQRGRLEEAVKCFNKAL 341
                  + Q   N    I LI             Y  +G +   +G+ ++A+  +NK+L
Sbjct: 276 -------LTQLDENHPMEIILI---------IANTYRDIGQVYNNQGKYDDALSAYNKSL 319

Query: 342 PLARDEAELSHIYSLRDAAIAQM--KVCERYNIKKKVSPRSQNITKNEKLAIKQLRENND 399
            +   +   +H       +IA     + + YN + K         K+ K+ + QL +N+ 
Sbjct: 320 KITLTKLGDNH------PSIANTYDNIGQVYNNQDKYDDALSLYYKSLKIKLTQLGDNHP 373

Query: 400 IIIRPADKGGKTVVMDKADYTQKMTSILNSNDYEIIP-GDPTKTIEESEKYGNLE---NE 455
            I    +  GK    D+  Y + ++ +  S    ++  GD   +I ++  Y N+    N 
Sbjct: 374 SIAITYNNIGK-AYSDQGKYDEALSMLNKSLKIRLVQLGDNHPSIADT--YNNIARAYNS 430

Query: 456 SGQ-KHAASDFTKAFA-DLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIAL 512
            G+  +A S + K+    L +     PN A +Y   G +Y   G+ ++AL    K++ +
Sbjct: 431 QGKYDNALSVYNKSLKIQLTQLGDNHPNTAITYNGIGNVYVNLGKQDDALSVYKKSLKI 489



 Score = 44.3 bits (103), Expect = 0.19,   Method: Compositional matrix adjust.
 Identities = 85/414 (20%), Positives = 179/414 (43%), Gaps = 51/414 (12%)

Query: 140 IKRAVVHLHAA-SDFTKAF-ADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKT 197
           IKR    L  A +DF K+    L      D +V+D Y++ G +Y   G+Y++AL   +K+
Sbjct: 44  IKRLQGDLSGALNDFYKSLKTKLKWLRSEDISVSDLYHKIGNVYDDQGKYDDALSMFNKS 103

Query: 198 IA-----LNPNF--------HVARAQRHFVVHKMIVPGDRERVEQSLKEFRNFVDTHSNV 244
           +      L+ N         ++ +  +H   +   +    + ++ +L +  N    H ++
Sbjct: 104 LKTQLTQLDENHPSIAITYSNIGQVYKHLDKYDEALSMLNKSLKITLTKLSN---NHPSI 160

Query: 245 VEACTLFAQVLVDQEDFDGAEEYFNRSIRVD---PE-NASLYVHRAMLMLQA---RGNVD 297
                   QV   Q  +D A    N+S+++    P  N S+  +    + Q    +G  D
Sbjct: 161 ANTYNNIGQVYNRQGKYDDALSIHNKSLKITLTRPNGNHSIIANTYRDIGQVYNNQGKYD 220

Query: 298 EAIKLIEKAISID--------KSCMFAYETLGTIEVQRGRLEEAVKCFNKALPLARDEAE 349
           +A+ +  K++ I          S    Y+ +G +   +G+ ++A+  FNK+L     + +
Sbjct: 221 DALSVYNKSLKITLTKLGDNHPSIANIYDKIGQVYCHQGKYDDALPVFNKSLKTQLTQLD 280

Query: 350 LSH-IYSLRDAAIAQMKVCERYNIKKKVSPRSQNITKNEKLAIKQLRENNDIIIRPADKG 408
            +H +  +   A     + + YN + K         K+ K+ + +L +N+  I    D  
Sbjct: 281 ENHPMEIILIIANTYRDIGQVYNNQGKYDDALSAYNKSLKITLTKLGDNHPSIANTYDNI 340

Query: 409 GKTVVMDKADYTQKMTSILNSNDYEIIP-GDPTKTIEESEKYGNLENESGQKHA-ASDFT 466
           G+ V  ++  Y   ++    S   ++   GD   +I  +  Y N+    G+ ++    + 
Sbjct: 341 GQ-VYNNQDKYDDALSLYYKSLKIKLTQLGDNHPSIAIT--YNNI----GKAYSDQGKYD 393

Query: 467 KAFADLDEAEKV--------DPNVADSYYQRGQIYCLFGQYEEALRNLDKTIAL 512
           +A + L+++ K+         P++AD+Y    + Y   G+Y+ AL   +K++ +
Sbjct: 394 EALSMLNKSLKIRLVQLGDNHPSIADTYNNIARAYNSQGKYDNALSVYNKSLKI 447



 Score = 42.4 bits (98), Expect = 0.67,   Method: Compositional matrix adjust.
 Identities = 79/373 (21%), Positives = 151/373 (40%), Gaps = 70/373 (18%)

Query: 168 PNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQRHFVVHKMIVPGDRERV 227
           P++A +Y   G+ Y   G+Y+EAL  L+K++ +                +++  GD    
Sbjct: 373 PSIAITYNNIGKAYSDQGKYDEALSMLNKSLKI----------------RLVQLGDNHP- 415

Query: 228 EQSLKEFRNFVDTHSNVVEACTLFAQVLVDQEDFDGAEEYFNRSIRVD--------PENA 279
                   +  DT++N+  A          Q  +D A   +N+S+++         P  A
Sbjct: 416 --------SIADTYNNIARAYN-------SQGKYDNALSVYNKSLKIQLTQLGDNHPNTA 460

Query: 280 SLYVHRAMLMLQARGNVDEAIKLIEKAISIDKS--------CMFAYETLGTIEVQRGRLE 331
             Y     + +   G  D+A+ + +K++ I+ +            Y  +G + + +G  +
Sbjct: 461 ITYNGIGNVYVNL-GKQDDALSVYKKSLKIELAQPGENHPYTAEIYNNIGQMNIYQGNYD 519

Query: 332 EAVKCFNKALPLARDEAELSHIYSLRDAAIA----QMKVCERYNIKKKVSPRSQNITKNE 387
            A+   NK+L +        H+  L D  +        V   Y  + K         K+ 
Sbjct: 520 SALLMLNKSLKI--------HLTRLGDNHLGITNTYHNVARVYTRQGKYDDALSICNKSI 571

Query: 388 KLAIKQLREN-NDIIIRPADKGGKTVVMDKADYTQKMTSILNSNDYEIIP-GDPTKTIEE 445
           K+ + +  +N N   I    +    V  D+  Y   ++ I  S   ++   GD   +I  
Sbjct: 572 KVLLTKFGDNCNHPRIARIYRNIGEVYTDQGKYDDAVSMISKSIKIDLTKLGDNHPSIAN 631

Query: 446 SEKYGNL----ENESGQKHAASDFTKAFA-DLDEAEKVDPNVADSYYQRGQIYCLFGQYE 500
           +  YG L    +N+     A S   K+    L +A K   +++ +Y + GQ+Y   G+ +
Sbjct: 632 T--YGELGHVYKNQGKYDDALSALYKSLKIKLSQAGKNYLSISLTYDRIGQVYHCQGKCD 689

Query: 501 EALRNLDKTIALN 513
           EAL  L+K++ LN
Sbjct: 690 EALSMLNKSLKLN 702



 Score = 42.0 bits (97), Expect = 0.75,   Method: Compositional matrix adjust.
 Identities = 82/407 (20%), Positives = 168/407 (41%), Gaps = 55/407 (13%)

Query: 146  HLHAASDFTKAFA-DLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIAL---- 200
            H  A S F K+    + +     P++A++Y + GQ+Y   G+Y++AL   +K++ +    
Sbjct: 856  HDEALSMFNKSLKITIKQLGNNHPSIANTYNKIGQVYNNQGKYDDALSVYNKSLKITLTR 915

Query: 201  ----NPNFHVARAQRHFVVHKMIVPGDRERV-EQSLK-EFRNFVDTHSNVVEACTLFAQV 254
                +PN          V +      D   V  +SLK     F D H ++ +       V
Sbjct: 916  LGDNHPNITKTYGDIGQVYNDQGKYDDALSVYNKSLKITLTKFDDNHPSIAKTYDNIGLV 975

Query: 255  LVDQEDFDGAEEYFNRSIRV------DPENASLYVHRAMLML-QARGNVDEAIKLIEKAI 307
               Q  +D A    N+S+++      D   +    +R +  +   +G  +EA+ +  K++
Sbjct: 976  YNKQGKYDDALSVHNKSLKIKLTRLGDNHQSIAITYRNIGQVYNDQGKYNEALSMFNKSL 1035

Query: 308  SID--------KSCMFAYETLGTIEVQRGRLEEAVKCFNKALP-----LARDEAELSHIY 354
             I          S    Y  +G I  ++G+ ++A+   NK+L      L  +   +++ Y
Sbjct: 1036 KITIKQLGNNHPSIANTYNKIGQIYNRQGKYDDALSIHNKSLKITLTRLGDNHPNIANTY 1095

Query: 355  SLRDAAIAQMKVCERYNIKKKVSPRSQNITKNEKLAIKQLRENNDIIIRPADKGGKTVVM 414
                 +I Q+     YN + K         K+ K+ + +L +N+  I    D  G+  V 
Sbjct: 1096 ----GSIGQV-----YNNQGKYDDALSVYNKSLKITLTKLGDNHPSIANTYDNIGQ--VY 1144

Query: 415  DKADYTQKMTSILNSNDYEIIPGDPTKTIEESEKYGNLENESGQKHA-ASDFTKAFADLD 473
            ++ D      S+     Y+ +    T+  +         N  G+  +    + +A + L+
Sbjct: 1145 NRQDKYDDALSVY----YKSLKIKLTRLGDNHPSIAMTCNNIGKVCSYQGKYDEALSMLN 1200

Query: 474  EAEKV--------DPNVADSYYQRGQIYCLFGQYEEALRNLDKTIAL 512
            ++ K+         P+++ +Y   GQ+Y    +Y++AL    K++ +
Sbjct: 1201 KSLKIRLLQLGHNHPSISITYSDIGQVYNRQSKYDDALSMFKKSLQV 1247



 Score = 38.9 bits (89), Expect = 7.6,   Method: Compositional matrix adjust.
 Identities = 33/192 (17%), Positives = 76/192 (39%), Gaps = 47/192 (24%)

Query: 168  PNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQRHFVVHKMIVPGDRERV 227
            PN+A++Y   GQ+Y   G+Y++AL   +K++ +                           
Sbjct: 1089 PNIANTYGSIGQVYNNQGKYDDALSVYNKSLKI--------------------------- 1121

Query: 228  EQSLKEFRNFVDTHSNVVEACTLFAQVLVDQEDFDGAEEYFNRSIRV-------DPENAS 280
                       D H ++        QV   Q+ +D A   + +S+++       +  + +
Sbjct: 1122 -----TLTKLGDNHPSIANTYDNIGQVYNRQDKYDDALSVYYKSLKIKLTRLGDNHPSIA 1176

Query: 281  LYVHRAMLMLQARGNVDEAIKLIEKAISI--------DKSCMFAYETLGTIEVQRGRLEE 332
            +  +    +   +G  DEA+ ++ K++ I          S    Y  +G +  ++ + ++
Sbjct: 1177 MTCNNIGKVCSYQGKYDEALSMLNKSLKIRLLQLGHNHPSISITYSDIGQVYNRQSKYDD 1236

Query: 333  AVKCFNKALPLA 344
            A+  F K+L ++
Sbjct: 1237 ALSMFKKSLQVS 1248


>gi|383774716|ref|YP_005453785.1| hypothetical protein S23_64920 [Bradyrhizobium sp. S23321]
 gi|381362843|dbj|BAL79673.1| hypothetical protein S23_64920 [Bradyrhizobium sp. S23321]
          Length = 461

 Score = 65.9 bits (159), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 67/287 (23%), Positives = 126/287 (43%), Gaps = 24/287 (8%)

Query: 268 FNRSIRVDPENASLYVHRAMLMLQARGNVDEAIKLIEKAISIDKSCMFAYETLGTIEVQR 327
            +R+I +D  NA  +  R  L+ +A G+++ A   + KAI +D     +YE  G +   +
Sbjct: 95  IDRAIALDGRNAKAWRLRGDLLREAGGDLNRAAADLSKAIELDPQDAESYELRGVVYTNQ 154

Query: 328 GRLEEAVKCFNKALPLARDEAELS-------HIYSLRDAAIAQMKVCERYNIKKKVSPRS 380
            RL+ A+  +++A+ L  D+A+         ++    + A+  +    R +  +   PRS
Sbjct: 155 RRLDRALADYDQAIKLKPDDAQAWSDRGVTYYLGGDNEKAVRDLSEALRLDPNR---PRS 211

Query: 381 QNITKNEKLAIKQLRENNDIIIRPADKGGKTVVMDKAD--YTQKMTSILNSNDYEIIPGD 438
                N   A K+L + +  +   AD G    +  K    Y  +  S+    +Y+    D
Sbjct: 212 YT---NRGAAYKKLGQLDKAV---ADDGEAIRLDPKVPEYYDNRGLSLAAMGEYDKAIAD 265

Query: 439 PTKTIEESEKYGNLENESGQKHAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQ 498
             + +  + +     N     H   +   A +D + A K+DPN A +Y  R  +Y   G+
Sbjct: 266 YDQALRLAPRPNFFTNRGDSYHLKGELGAALSDYESALKLDPNFAQTYNNRAVLYKKMGE 325

Query: 499 YEEALRNLDKTIALNP-NFHVARAQRHFVWTSTLAELMAFSDEFMIP 544
             +AL + +  + L+P N + A  +R  +     AE+  F  E + P
Sbjct: 326 RRKALADYETALRLDPGNDNAANGRRAMI-----AEIAKFGAEPLRP 367



 Score = 63.5 bits (153), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 86/336 (25%), Positives = 147/336 (43%), Gaps = 33/336 (9%)

Query: 81  IRHCTEEIESTSSNHT-KALARLLRATVYIFTSQS-TKAIEDLTQLVEDTSVDPKIKVNA 138
           I  C   I+  S+  + +A A L+RA     TS   T+A+ D+ + +   ++D +    A
Sbjct: 53  IPACGAIIDQASNPSSDRAAALLVRADANARTSGGLTQALRDIDRAI---ALDGR-NAKA 108

Query: 139 HIKRAVVHLHAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTI 198
              R  +   A  D  +A ADL +A ++DP  A+SY  RG +Y    + + AL + D+ I
Sbjct: 109 WRLRGDLLREAGGDLNRAAADLSKAIELDPQDAESYELRGVVYTNQRRLDRALADYDQAI 168

Query: 199 ALNPNFHVARAQRHFVVHKMIVPGDRERVEQSLKEF----RNFVDTHSNVVEACTLFAQV 254
            L P+   A + R    +   + GD E+  + L E      N   +++N   A     Q 
Sbjct: 169 KLKPDDAQAWSDRGVTYY---LGGDNEKAVRDLSEALRLDPNRPRSYTNRGAAYKKLGQ- 224

Query: 255 LVDQEDFDGAEEYFNRSIRVDPENASLYVHRAMLMLQARGNVDEAIKLIEKAISIDKSCM 314
            +D+   D  E     +IR+DP+    Y +R  L L A G  D+AI   ++A+ +     
Sbjct: 225 -LDKAVADDGE-----AIRLDPKVPEYYDNRG-LSLAAMGEYDKAIADYDQALRLAPRPN 277

Query: 315 FAYETLGTIEVQRGRLEEAVKCFNKALPLARDEAELSHIYSLRDAAIAQMKVCER----- 369
           F +   G     +G L  A+  +  AL L   +   +  Y+ R  A+   K+ ER     
Sbjct: 278 F-FTNRGDSYHLKGELGAALSDYESALKL---DPNFAQTYNNR--AVLYKKMGERRKALA 331

Query: 370 -YNIKKKVSPRSQNITKNEKLAIKQLRENNDIIIRP 404
            Y    ++ P + N     +  I ++ +     +RP
Sbjct: 332 DYETALRLDPGNDNAANGRRAMIAEIAKFGAEPLRP 367


>gi|425460012|ref|ZP_18839498.1| Similar to tr|Q3M7C2|Q3M7C2_ANAVT Protein prenyltransferase
           [Microcystis aeruginosa PCC 9808]
 gi|389827371|emb|CCI21411.1| Similar to tr|Q3M7C2|Q3M7C2_ANAVT Protein prenyltransferase
           [Microcystis aeruginosa PCC 9808]
          Length = 944

 Score = 65.9 bits (159), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 51/230 (22%), Positives = 104/230 (45%), Gaps = 16/230 (6%)

Query: 120 DLTQLVEDTSVDPKIKVNAHIKRAVVHLHAASDFTKAFADLDEAEKVDPNVADSYYQRGQ 179
           DLT++V+D        V  + K      +   DF  A A  D A ++ P+  +++  RG 
Sbjct: 142 DLTEVVQDAEF---WFVQGYQK------YMNGDFIGAIASWDRALEIKPDKHEAWNNRGV 192

Query: 180 IYCLFGQYEEALRNLDKTIALNPNFHVARAQRHFVVHKMIVPGDRERVEQSLKEFRNFVD 239
                G++EEA+ + D+ + + P+++ A   R   +H +       R E+++  +   ++
Sbjct: 193 ALGNLGRFEEAIASYDRALEIKPDYYEAWNNRGSALHNL------GRFEEAIASYDRALE 246

Query: 240 THSNVVEACTLFAQVLVDQEDFDGAEEYFNRSIRVDPENASLYVHRAMLMLQARGNVDEA 299
              +  EA       L +   F+ A   ++R++ + P+    +  R  + L   G  ++A
Sbjct: 247 IKPDKHEAWHNRGSALHNLGRFEEAIASWDRALEIKPDYPDAWYGRG-IALDDLGRFEQA 305

Query: 300 IKLIEKAISIDKSCMFAYETLGTIEVQRGRLEEAVKCFNKALPLARDEAE 349
           I   ++A+ I      A+   G      GR E+A+  +++AL +  D+ E
Sbjct: 306 IASYDRALEIKPDKHEAWNNRGVALDDLGRFEQAIASYDRALEIKPDDHE 355



 Score = 51.2 bits (121), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 45/218 (20%), Positives = 96/218 (44%), Gaps = 10/218 (4%)

Query: 145 VHLHAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNF 204
           V L     F +A A  D A ++ P+  +++  RG      G++EEA+ + D+ + + P+ 
Sbjct: 192 VALGNLGRFEEAIASYDRALEIKPDYYEAWNNRGSALHNLGRFEEAIASYDRALEIKPDK 251

Query: 205 HVARAQRHFVVHKMIVPGDRERVEQSLKEFRNFVDTHSNVVEACTLFAQVLVDQEDFDGA 264
           H A   R   +H +       R E+++  +   ++   +  +A       L D   F+ A
Sbjct: 252 HEAWHNRGSALHNL------GRFEEAIASWDRALEIKPDYPDAWYGRGIALDDLGRFEQA 305

Query: 265 EEYFNRSIRVDPENASLYVHRAMLMLQARGNVDEAIKLIEKAISIDKSCMFAYETLG--T 322
              ++R++ + P+    + +R +  L   G  ++AI   ++A+ I      A+   G   
Sbjct: 306 IASYDRALEIKPDKHEAWNNRGV-ALDDLGRFEQAIASYDRALEIKPDDHEAWYNRGRAV 364

Query: 323 IEVQRGRLE-EAVKCFNKALPLARDEAELSHIYSLRDA 359
             + + R+   +++      P+        HI++LR+A
Sbjct: 365 CSLSKNRVSTPSLEALIYRKPIVALNDREPHIFALREA 402



 Score = 43.9 bits (102), Expect = 0.19,   Method: Compositional matrix adjust.
 Identities = 26/93 (27%), Positives = 47/93 (50%), Gaps = 1/93 (1%)

Query: 260 DFDGAEEYFNRSIRVDPENASLYVHRAMLMLQARGNVDEAIKLIEKAISIDKSCMFAYET 319
           DF GA   ++R++ + P+    + +R +  L   G  +EAI   ++A+ I      A+  
Sbjct: 165 DFIGAIASWDRALEIKPDKHEAWNNRGV-ALGNLGRFEEAIASYDRALEIKPDYYEAWNN 223

Query: 320 LGTIEVQRGRLEEAVKCFNKALPLARDEAELSH 352
            G+     GR EEA+  +++AL +  D+ E  H
Sbjct: 224 RGSALHNLGRFEEAIASYDRALEIKPDKHEAWH 256



 Score = 42.4 bits (98), Expect = 0.67,   Method: Compositional matrix adjust.
 Identities = 19/66 (28%), Positives = 36/66 (54%)

Query: 458 QKHAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFH 517
           QK+   DF  A A  D A ++ P+  +++  RG      G++EEA+ + D+ + + P+++
Sbjct: 159 QKYMNGDFIGAIASWDRALEIKPDKHEAWNNRGVALGNLGRFEEAIASYDRALEIKPDYY 218

Query: 518 VARAQR 523
            A   R
Sbjct: 219 EAWNNR 224



 Score = 38.9 bits (89), Expect = 6.6,   Method: Compositional matrix adjust.
 Identities = 17/68 (25%), Positives = 34/68 (50%)

Query: 449 YGNLENESGQKHAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDK 508
           Y    N     H    F +A A  D A ++ P+  ++++ RG      G++EEA+ + D+
Sbjct: 218 YEAWNNRGSALHNLGRFEEAIASYDRALEIKPDKHEAWHNRGSALHNLGRFEEAIASWDR 277

Query: 509 TIALNPNF 516
            + + P++
Sbjct: 278 ALEIKPDY 285


>gi|113474349|ref|YP_720410.1| hypothetical protein Tery_0481 [Trichodesmium erythraeum IMS101]
 gi|110165397|gb|ABG49937.1| TPR repeat [Trichodesmium erythraeum IMS101]
          Length = 3145

 Score = 65.9 bits (159), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 52/222 (23%), Positives = 107/222 (48%), Gaps = 29/222 (13%)

Query: 155  KAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNP-----NFH---- 205
            +A A   +A  ++PN + +Y   G I+   GQ E A+ N +K+I +NP     NF+    
Sbjct: 1079 EAIAHYQKAISLEPNNSSNYSNLGFIFLEKGQIESAIINSEKSIEINPNNSQGNFNLGFA 1138

Query: 206  ------VARAQRHFVVHKMIVPG-------------DRERVEQSLKEFRNFVDTHSNVVE 246
                  +++A  ++     + P              ++  + ++   ++  ++ + N  E
Sbjct: 1139 WAEKGDLSKASTYYQKAINLQPDYAQAHNNLGLIFQEKGNLSKASNYYQQALEINPNYAE 1198

Query: 247  ACTLFAQVLVDQEDFDGAEEYFNRSIRVDPENASLYVHRAMLMLQARGNVDEAIKLIEKA 306
            A      +L+ Q   + A EYF +S+ ++P+ A  Y +    + Q +GN+ +A    ++A
Sbjct: 1199 AWCNLGVILLKQGQIELAIEYFRKSLELNPDYAQAY-NNLGFVFQEKGNLSKASNYYQQA 1257

Query: 307  ISIDKSCMFAYETLGTIEVQRGRLEEAVKCFNKALPLARDEA 348
            + I+ +   A+  LG +  ++G++E A++ F K+L L  D A
Sbjct: 1258 LEINPNYAEAWCNLGVVLRKQGQIELAIEYFRKSLELNPDYA 1299



 Score = 58.9 bits (141), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 45/211 (21%), Positives = 100/211 (47%), Gaps = 9/211 (4%)

Query: 139  HIKRAVVHLHAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTI 198
            H+   + +L   +D   A   L++   + P   ++Y    ++    G+ EEA+ +  K I
Sbjct: 1031 HLLAVLENLAGRNDI--AIQLLNQVINLYPGFTEAYSNLAKLMKKEGRLEEAIAHYQKAI 1088

Query: 199  ALNPNFHVARAQRHFVVHKMIVPGDRERVEQSLKEFRNFVDTHSNVVEACTLFAQVLVDQ 258
            +L PN     +   F+        ++ ++E ++      ++ + N  +          ++
Sbjct: 1089 SLEPNNSSNYSNLGFIFL------EKGQIESAIINSEKSIEINPNNSQGNFNLGFAWAEK 1142

Query: 259  EDFDGAEEYFNRSIRVDPENASLYVHRAMLMLQARGNVDEAIKLIEKAISIDKSCMFAYE 318
             D   A  Y+ ++I + P+ A  + +   L+ Q +GN+ +A    ++A+ I+ +   A+ 
Sbjct: 1143 GDLSKASTYYQKAINLQPDYAQAH-NNLGLIFQEKGNLSKASNYYQQALEINPNYAEAWC 1201

Query: 319  TLGTIEVQRGRLEEAVKCFNKALPLARDEAE 349
             LG I +++G++E A++ F K+L L  D A+
Sbjct: 1202 NLGVILLKQGQIELAIEYFRKSLELNPDYAQ 1232



 Score = 56.6 bits (135), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 51/263 (19%), Positives = 118/263 (44%), Gaps = 9/263 (3%)

Query: 151  SDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQ 210
             D +KA     +A  + P+ A ++   G I+   G   +A     + + +NPN+  A   
Sbjct: 1143 GDLSKASTYYQKAINLQPDYAQAHNNLGLIFQEKGNLSKASNYYQQALEINPNYAEAWCN 1202

Query: 211  RHFVVHKMIVPGDRERVEQSLKEFRNFVDTHSNVVEACTLFAQVLVDQEDFDGAEEYFNR 270
               ++ K      + ++E +++ FR  ++ + +  +A      V  ++ +   A  Y+ +
Sbjct: 1203 LGVILLK------QGQIELAIEYFRKSLELNPDYAQAYNNLGFVFQEKGNLSKASNYYQQ 1256

Query: 271  SIRVDPENASLYVHRAMLMLQARGNVDEAIKLIEKAISIDKSCMFAYETLGTIEVQRGRL 330
            ++ ++P  A  + +  + +L+ +G ++ AI+   K++ ++      + +LG    + G  
Sbjct: 1257 ALEINPNYAEAWCNLGV-VLRKQGQIELAIEYFRKSLELNPDYAMTHNSLGVTFEEEGNF 1315

Query: 331  EEAVKCFNKALPLARDEAELSHIYSLRDAAIAQMKVC-ERYNIKKKVSPRSQNITKNEKL 389
              ++  + KAL L  +  E+    SL    +  +K+  + YN + + S ++  + + EKL
Sbjct: 1316 TASIASYQKALELEPNFPEVHLNLSLVWLLLGDLKLGFQEYNWRWQAS-KALFLIQPEKL 1374

Query: 390  AIKQLRENNDIIIRPADKGGKTV 412
                  E   I+I      G T+
Sbjct: 1375 WDGSNLEGKKILIYAEQGYGDTI 1397



 Score = 56.6 bits (135), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 40/162 (24%), Positives = 76/162 (46%), Gaps = 7/162 (4%)

Query: 185 GQYEEALRNLDKTIALNPNFHVARAQRHFVVHKMIVPGDRERVEQSLKEFRNFVDTHSNV 244
           G +EE +    K I   PN  +         +K        ++EQ++  ++  +  + N 
Sbjct: 24  GNWEETINICHKIIKRQPNNFLVLELLGLCAYK------NNQIEQAIAYYQKSLKVNYNY 77

Query: 245 VEACTLFAQVLVDQEDFDGAEEYFNRSIRVDPENASLYVHRAMLMLQARGNVDEAIKLIE 304
            E     A  L D +  D A  +   +I++ P  A  + H   L+L+ +G  + AI+  +
Sbjct: 78  AETHNNLAVALQDNQQIDAALRHCKIAIKLCPNYAEAW-HNLGLILRDKGQFEAAIEHYQ 136

Query: 305 KAISIDKSCMFAYETLGTIEVQRGRLEEAVKCFNKALPLARD 346
           K++ I  +    Y +LGTI ++ G+L E+ K + +AL L ++
Sbjct: 137 KSLEIKPNNAEVYHSLGTISLELGKLSESQKYYQEALKLDKN 178



 Score = 48.9 bits (115), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 38/170 (22%), Positives = 83/170 (48%), Gaps = 7/170 (4%)

Query: 183  LFGQYEEALRNLDKTIALNPNFHVARAQRHFVVHKMIVPGDRERVEQSLKEFRNFVDTHS 242
            L G+ + A++ L++ I LNP F  A +    ++ K        R+E+++  ++  ++   
Sbjct: 1690 LAGRNDIAIQLLNQVINLNPGFTKAYSNLAKLMKK------EGRLEEAIAHYQKAIELEP 1743

Query: 243  NVVEACTLFAQVLVDQEDFDGAEEYFNRSIRVDPENASLYVHRAMLMLQARGNVDEAIKL 302
            N     +    + + +   D A   + +S +++P ++ + ++   +  +  GN+ +A   
Sbjct: 1744 NNSSNYSSLGWIFLQKGQIDLAIINYKKSRKINPNSSWININLGFVW-EKNGNLPKANTY 1802

Query: 303  IEKAISIDKSCMFAYETLGTIEVQRGRLEEAVKCFNKALPLARDEAELSH 352
             +KAI I  +   A+  LG I  ++G+ E A++   K+L L  D  E +H
Sbjct: 1803 YQKAIEIHPNHAEAWCRLGNILQKQGQFELAIEYCQKSLELNPDYIEANH 1852



 Score = 48.5 bits (114), Expect = 0.010,   Method: Compositional matrix adjust.
 Identities = 39/156 (25%), Positives = 70/156 (44%), Gaps = 13/156 (8%)

Query: 155  KAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQRHFV 214
            +A A   +A +++PN + +Y   G I+   GQ + A+ N  K+  +NPN         FV
Sbjct: 1730 EAIAHYQKAIELEPNNSSNYSSLGWIFLQKGQIDLAIINYKKSRKINPNSSWININLGFV 1789

Query: 215  VHKMIVPGDRERVEQSLKEFRNFVDTHSNVVEACTLFAQVLVDQEDFDGAEEYFNRSIRV 274
              K         + ++   ++  ++ H N  EA      +L  Q  F+ A EY  +S+ +
Sbjct: 1790 WEK------NGNLPKANTYYQKAIEIHPNHAEAWCRLGNILQKQGQFELAIEYCQKSLEL 1843

Query: 275  DPENASLYV---HRAMLMLQARGNVDEAIKLIEKAI 307
            +P+    Y+   H    +    G + E+ K  E+AI
Sbjct: 1844 NPD----YIEANHSLGYIFFQLGKLAESQKYYEQAI 1875



 Score = 45.8 bits (107), Expect = 0.058,   Method: Compositional matrix adjust.
 Identities = 34/152 (22%), Positives = 69/152 (45%), Gaps = 12/152 (7%)

Query: 203 NFHVARAQRHFVVHKM-----------IVPGDRERVEQSLKEFRNFVDTHSNVVEACTLF 251
           N+  A    HF++ K            +     ++++ ++  ++  ++ + N  +     
Sbjct: 523 NWKEAEEICHFIIQKQPNCTSAFEILALCAKKTDKIDLAIVYYQKAINLNPNNYKTHLGL 582

Query: 252 AQVLVDQEDFDGAEEYFNRSIRVDPENASLYVHRAMLMLQARGNVDEAIKLIEKAISIDK 311
           A VL  Q+  D A  +  R+I + P  AS + H   ++ + +GN+ EAI   +K++ I  
Sbjct: 583 AIVLKKQQKLDEAIVHNQRAIELKPNEASGW-HNLGVIFKIQGNIPEAICCYQKSLEIQP 641

Query: 312 SCMFAYETLGTIEVQRGRLEEAVKCFNKALPL 343
           +  + Y +   I  Q+G L EA   + K + L
Sbjct: 642 NNTYIYYSWANILKQQGNLTEAKVLYEKCIEL 673



 Score = 38.5 bits (88), Expect = 9.3,   Method: Compositional matrix adjust.
 Identities = 22/75 (29%), Positives = 42/75 (56%), Gaps = 1/75 (1%)

Query: 267  YFNRSIRVDPENASLYVHRAMLMLQARGNVDEAIKLIEKAISIDKSCMFAYETLGTIEVQ 326
            Y  ++I ++P N   Y++ A + L+ +   + AI   +KA+S   +   A+  LG I   
Sbjct: 2293 YCQKAISLNPNNEQTYLNLA-IALKNQHKFNAAIIHNQKALSRKPNYAEAWHNLGQIFKG 2351

Query: 327  RGRLEEAVKCFNKAL 341
            +G + E+++C+ KAL
Sbjct: 2352 KGEITESIRCYQKAL 2366


>gi|416377582|ref|ZP_11683629.1| TPR repeat protein [Crocosphaera watsonii WH 0003]
 gi|357266196|gb|EHJ14859.1| TPR repeat protein [Crocosphaera watsonii WH 0003]
          Length = 287

 Score = 65.9 bits (159), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 51/203 (25%), Positives = 90/203 (44%), Gaps = 7/203 (3%)

Query: 150 ASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARA 209
           A ++  A A   E+ K+DP  AD+YY RG  Y +  ++EE++ + D+ I L  +F  A  
Sbjct: 76  ARNYQGAIAAFSESIKLDPTDADAYYNRGYSYLVLEKFEESIEDYDQAIELKSDFAYAYG 135

Query: 210 QRHFVVHKMIVPGDRERVEQSLKEFRNFVDTHSNVVEACTLFAQVLVDQEDFDGAEEYFN 269
            R +  +++      +  EQ++ +    ++  S   +          D E  + A   +N
Sbjct: 136 NRCYAYYQL------KNHEQAITDCSKAIELESKYGDFYIYRGNAKDDLEMHEAAILDYN 189

Query: 270 RSIRVDPENASLYVHRAMLMLQARGNVDEAIKLIEKAISIDKSCMFAYETLGTIEVQRGR 329
           ++I + P N   Y +RA L     G   +A++   KAI  + +   AY   G    +   
Sbjct: 190 QAIIISPNNPKAYYNRA-LAYNRLGKSLQAVEDYSKAIQFNTNFADAYHNRGVTRFKLEE 248

Query: 330 LEEAVKCFNKALPLARDEAELSH 352
            E+A+    KA  L R +    H
Sbjct: 249 KEKAIADLRKAAQLFRQQGNTDH 271



 Score = 47.8 bits (112), Expect = 0.015,   Method: Compositional matrix adjust.
 Identities = 22/66 (33%), Positives = 37/66 (56%)

Query: 462 ASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARA 521
           A ++  A A   E+ K+DP  AD+YY RG  Y +  ++EE++ + D+ I L  +F  A  
Sbjct: 76  ARNYQGAIAAFSESIKLDPTDADAYYNRGYSYLVLEKFEESIEDYDQAIELKSDFAYAYG 135

Query: 522 QRHFVW 527
            R + +
Sbjct: 136 NRCYAY 141


>gi|118350326|ref|XP_001008444.1| TPR Domain containing protein [Tetrahymena thermophila]
 gi|89290211|gb|EAR88199.1| TPR Domain containing protein [Tetrahymena thermophila SB210]
          Length = 550

 Score = 65.9 bits (159), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 53/194 (27%), Positives = 91/194 (46%), Gaps = 11/194 (5%)

Query: 165 KVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQRHFVVHKMIVPGDR 224
           KVD   AD+ Y  G IY      ++A+    +   +NP  ++A+ Q   + H+      +
Sbjct: 332 KVDSRNADALYYLGIIYQKENNIQKAISIFKEVTQINPTKYIAQIQLGQLYHQ------Q 385

Query: 225 ERVEQSLKEFRNFVDTHSNVVEACTLFAQVLVDQEDFDGAEEYFNRSIRVDPENASLYVH 284
            +VE ++  ++  +    N   A    + +L +  DF+ AE    +++ VDP NA    H
Sbjct: 386 GKVEDAIISYKRILQVQPNNYFALNYLSFLLYELGDFNQAELLCKKALAVDP-NAYEPYH 444

Query: 285 RAMLMLQARGNVDEAIKLIEKAISIDKSCMFAYETLGTIEVQRGRLEEAVKCFNKAL--- 341
              L+ Q +   ++AIK  + A+  +  C  AY  LG I  ++G L+EA+  F +A+   
Sbjct: 445 NLGLIYQDKLLYEQAIKFYQSALKSNPDCAEAYNNLGCIYYEKGNLKEAINQFEEAIKAN 504

Query: 342 -PLARDEAELSHIY 354
              A     LS IY
Sbjct: 505 PKFAEAHKNLSIIY 518



 Score = 51.6 bits (122), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 60/266 (22%), Positives = 117/266 (43%), Gaps = 35/266 (13%)

Query: 78  LTAIRHCTEEIESTSSNHTKAL--------ARLLRATVYIFTSQSTKAIEDLTQLVEDTS 129
           L  I H  + IE       +A+        A L+ A +Y+    + K I +  QL E   
Sbjct: 276 LVEIYHSADLIEYAQEYLEQAIKIQPHNVKANLILAGIYL----AQKMILEAKQLCEQV- 330

Query: 130 VDPKIKVNAHIKRAVVHL----HAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFG 185
               IKV++    A+ +L       ++  KA +   E  +++P    +  Q GQ+Y   G
Sbjct: 331 ----IKVDSRNADALYYLGIIYQKENNIQKAISIFKEVTQINPTKYIAQIQLGQLYHQQG 386

Query: 186 QYEEALRNLDKTIALNPNFHVARAQRHFVVHKMIVPGDRERVEQSLKEFRNFVDTHSNVV 245
           + E+A+ +  + + + PN + A     F+++++   GD  + E   K+    +    N  
Sbjct: 387 KVEDAIISYKRILQVQPNNYFALNYLSFLLYEL---GDFNQAELLCKKA---LAVDPNAY 440

Query: 246 EACTLFAQVLVDQEDFDGAEEYFNRSIRVDPENASLYVHRAMLMLQARGNVDEAIKLIEK 305
           E       +  D+  ++ A +++  +++ +P+ A  Y +   +  + +GN+ EAI   E+
Sbjct: 441 EPYHNLGLIYQDKLLYEQAIKFYQSALKSNPDCAEAYNNLGCIYYE-KGNLKEAINQFEE 499

Query: 306 AISID-------KSCMFAYETLGTIE 324
           AI  +       K+    YE +G IE
Sbjct: 500 AIKANPKFAEAHKNLSIIYENMGLIE 525



 Score = 50.4 bits (119), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 41/191 (21%), Positives = 94/191 (49%), Gaps = 9/191 (4%)

Query: 152 DFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQR 211
           D+ +A    ++  ++DP   ++ ++ G       + +EA+ N  KT+ + P+   A  + 
Sbjct: 217 DWQQAIGYFEKTIEIDPENINALFELGVTQFQIEELDEAIHNFKKTLMIQPDHFNALFKL 276

Query: 212 HFVVHKM-IVPGDRERVEQSLKEFRNFVDTHSNVVEACTLFAQVLVDQEDFDGAEEYFNR 270
             + H   ++   +E +EQ++K     +  H+  V+A  + A + + Q+    A++   +
Sbjct: 277 VEIYHSADLIEYAQEYLEQAIK-----IQPHN--VKANLILAGIYLAQKMILEAKQLCEQ 329

Query: 271 SIRVDPENASLYVHRAMLMLQARGNVDEAIKLIEKAISIDKSCMFAYETLGTIEVQRGRL 330
            I+VD  NA    +  ++  Q   N+ +AI + ++   I+ +   A   LG +  Q+G++
Sbjct: 330 VIKVDSRNADALYYLGIIY-QKENNIQKAISIFKEVTQINPTKYIAQIQLGQLYHQQGKV 388

Query: 331 EEAVKCFNKAL 341
           E+A+  + + L
Sbjct: 389 EDAIISYKRIL 399



 Score = 48.9 bits (115), Expect = 0.008,   Method: Compositional matrix adjust.
 Identities = 90/422 (21%), Positives = 162/422 (38%), Gaps = 92/422 (21%)

Query: 171 ADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQRHFVVHKMIVPGDRERVEQS 230
            + Y ++G  Y   G  +EA+    K I LNP  +  + Q  ++  ++      +R++++
Sbjct: 66  GNDYEKQGFDYLGKGFNQEAILCFQKAIELNPQLNHLKQQLGYLCLEV------DRLDEA 119

Query: 231 LKEFRNFVDTHSNVVEACTLFAQVLVDQEDFD-GAEEYFNRSIRVDP------------- 276
           +K F   +   S+  E   L   ++ ++ + D  AEEY+ + ++ +              
Sbjct: 120 IKYFEQSLGFSSDPYEIYNLLG-IIYERNNMDEKAEEYYKKCLQTNENYLGAYFNLAQVY 178

Query: 277 ------ENASLYVHRAMLMLQARGNV--------------DEAIKLIEKAISIDKSCMFA 316
                 +NA L + +A ++  +   V               +AI   EK I ID   + A
Sbjct: 179 YKLNKMQNAKLCLEKASIIFPSEPEVFNKLGQLCQEMEDWQQAIGYFEKTIEIDPENINA 238

Query: 317 YETLGTIEVQRGRLEEAVKCFNKALPLARDE-------AELSHIYSLRDAA---IAQMKV 366
              LG  + Q   L+EA+  F K L +  D         E+ H   L + A   + Q   
Sbjct: 239 LFELGVTQFQIEELDEAIHNFKKTLMIQPDHFNALFKLVEIYHSADLIEYAQEYLEQAIK 298

Query: 367 CERYNIKKKVSPRSQNITKNEKLAIKQLRENNDIIIRPADKGGKT-----VVMDKADYTQ 421
            + +N+K  +      + +   L  KQL E    +I+   +         ++  K +  Q
Sbjct: 299 IQPHNVKANLILAGIYLAQKMILEAKQLCEQ---VIKVDSRNADALYYLGIIYQKENNIQ 355

Query: 422 KMTSILNSNDYEIIPGDPTKTIEESEKYGNLENESGQKHAA------------------- 462
           K  SI      E+   +PTK I + +  G L ++ G+   A                   
Sbjct: 356 KAISIFK----EVTQINPTKYIAQIQ-LGQLYHQQGKVEDAIISYKRILQVQPNNYFALN 410

Query: 463 ---------SDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALN 513
                     DF +A     +A  VDPN  + Y+  G IY     YE+A++     +  N
Sbjct: 411 YLSFLLYELGDFNQAELLCKKALAVDPNAYEPYHNLGLIYQDKLLYEQAIKFYQSALKSN 470

Query: 514 PN 515
           P+
Sbjct: 471 PD 472



 Score = 41.6 bits (96), Expect = 1.0,   Method: Compositional matrix adjust.
 Identities = 56/254 (22%), Positives = 107/254 (42%), Gaps = 41/254 (16%)

Query: 292 ARGNVDEAIKLIEKAISIDKSCMFAYETLGTIEVQRGRLEEAVKCFNKALPLARDEAELS 351
            +G   EAI   +KAI ++       + LG + ++  RL+EA+K F ++L  + D  E+ 
Sbjct: 78  GKGFNQEAILCFQKAIELNPQLNHLKQQLGYLCLEVDRLDEAIKYFEQSLGFSSDPYEIY 137

Query: 352 HIYSLRDAAIAQMKVCERYNIKKKVSPRSQNITKNEKLAIKQLRENNDII---IRPADKG 408
           ++  +         + ER N+ +K           E+   K L+ N + +      A   
Sbjct: 138 NLLGI---------IYERNNMDEKA----------EEYYKKCLQTNENYLGAYFNLAQVY 178

Query: 409 GKTVVMDKADYTQKMTSILNSNDYEIIPGDPTKTIEESEKYGNLENESGQKHAASDFTKA 468
            K   M  A    +  SI       I P +P    E   K G L  E        D+ +A
Sbjct: 179 YKLNKMQNAKLCLEKASI-------IFPSEP----EVFNKLGQLCQE------MEDWQQA 221

Query: 469 FADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQRHFVWT 528
               ++  ++DP   ++ ++ G       + +EA+ N  KT+ + P+   A  +   ++ 
Sbjct: 222 IGYFEKTIEIDPENINALFELGVTQFQIEELDEAIHNFKKTLMIQPDHFNALFKLVEIYH 281

Query: 529 STLAELMAFSDEFM 542
           S  A+L+ ++ E++
Sbjct: 282 S--ADLIEYAQEYL 293



 Score = 40.0 bits (92), Expect = 3.0,   Method: Compositional matrix adjust.
 Identities = 75/373 (20%), Positives = 153/373 (41%), Gaps = 50/373 (13%)

Query: 160 LDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPN-----FHVARAQRHFV 214
           L++A  + P+  + + + GQ+      +++A+   +KTI ++P      F +   Q    
Sbjct: 191 LEKASIIFPSEPEVFNKLGQLCQEMEDWQQAIGYFEKTIEIDPENINALFELGVTQFQI- 249

Query: 215 VHKMIVPGDRERVEQSLKEFRNFVDTHSNVVEACTLFAQVLVDQEDFDGAEEYFNRSIRV 274
                     E +++++  F+  +    +   A     ++    +  + A+EY  ++I++
Sbjct: 250 ----------EELDEAIHNFKKTLMIQPDHFNALFKLVEIYHSADLIEYAQEYLEQAIKI 299

Query: 275 DPENASLYVHRAMLMLQARGNVDEAIKLIEKAISIDKSCMFAYETLGTIEVQRGRLEEAV 334
            P N    +  A + L A+  + EA +L E+ I +D     A   LG I  +   +++A+
Sbjct: 300 QPHNVKANLILAGIYL-AQKMILEAKQLCEQVIKVDSRNADALYYLGIIYQKENNIQKAI 358

Query: 335 KCFNKALPLARDEAELSHIYSLRDAAIAQMKVCERYNIKKKVSPRSQNITKNEKLAIKQL 394
             F           E++ I   +   IAQ+++ + Y+ + KV     +  +     I Q+
Sbjct: 359 SIF----------KEVTQINPTK--YIAQIQLGQLYHQQGKVEDAIISYKR-----ILQV 401

Query: 395 RENNDIIIRPADKGGKTVVMDKADYTQKMTSILNSNDYEIIPGDPTKTIEESEKYGNLEN 454
           + NN   +         ++ +  D+ Q    +L     + +  DP       E Y NL  
Sbjct: 402 QPNNYFALNYLS----FLLYELGDFNQ--AELLCK---KALAVDPNAY----EPYHNLGL 448

Query: 455 ESGQKHAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNP 514
               K     + +A      A K +P+ A++Y   G IY   G  +EA+   ++ I  NP
Sbjct: 449 IYQDKLL---YEQAIKFYQSALKSNPDCAEAYNNLGCIYYEKGNLKEAINQFEEAIKANP 505

Query: 515 NFHVARAQRHFVW 527
            F  A      ++
Sbjct: 506 KFAEAHKNLSIIY 518


>gi|300863514|ref|ZP_07108466.1| Tetratricopeptide TPR_2 (fragment) [Oscillatoria sp. PCC 6506]
 gi|300338470|emb|CBN53608.1| Tetratricopeptide TPR_2 (fragment) [Oscillatoria sp. PCC 6506]
          Length = 401

 Score = 65.9 bits (159), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 80/379 (21%), Positives = 156/379 (41%), Gaps = 28/379 (7%)

Query: 147 LHAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHV 206
           L   +   K  A  ++A ++ P    + Y +G      G+++EA+ +  + + LNP+FH 
Sbjct: 9   LEKLASIEKPIASGNKAVEITPQNPQACYDQGNALVQLGRFQEAIASWTQAVKLNPDFHE 68

Query: 207 ARAQRHFVVHKMIVPGDRERVEQSLKEFRNFVDTHSNVVEACTLFAQVLVDQEDFDGAEE 266
           A   R     K+         ++++ ++   ++      EA    A  L   E F+ A  
Sbjct: 69  AWYNRGVAYRKLGCN------QEAIADYDKSLEIKPENAEAWYNRANALRSLERFEEAIA 122

Query: 267 YFNRSIRVDPENASLYVHRAMLMLQARGNVDEAIKLIEKAISIDKSCMFAYETLGTIEVQ 326
            +++++++ PE    + +R    +    N +EAI   +KA++I      A+   G     
Sbjct: 123 DYDKALQIRPEYHEAWSNRGNTFVNLERN-EEAIADYDKALAIRPDYYEAWYNRGMALKS 181

Query: 327 RGRLEEAVKCFNKALPLARDEAELSHIYSLRDAAIAQ----MKVCERYNIKKKVSPRSQN 382
            G+  EA+  +N+AL +      L   +  R  A+A      +    Y+    + P +  
Sbjct: 182 LGKFAEAIASYNRALEI---RPNLHQAWYNRGIALANSGEFAEAIASYDKTLALKPNAWE 238

Query: 383 ITKNEKLAIKQLRENNDIIIRPADKGGKTVVMDKADYTQ----KMTSILNSNDYEIIPGD 438
           +      A+ Q  +  D+ I   D+     V  K DY +    +  ++ +   +      
Sbjct: 239 VWNKRGTALVQSGQ-LDVAIASWDRA----VELKPDYHEAWYNRGLALASLEKFAAAIAS 293

Query: 439 PTKTIEESEKYGNLENESGQKHAASDFTK---AFADLDEAEKVDPNVADSYYQRGQIYCL 495
             K++E      N E    +  A S   +   A A  D+  ++ P+ A + Y +  +YC 
Sbjct: 294 WDKSLEFHPD--NREAWYNRGIALSKLERIEDAIASYDKVLEIKPDDAATLYHKAGLYCQ 351

Query: 496 FGQYEEALRNLDKTIALNP 514
               + A+ NL + IALNP
Sbjct: 352 QNNTDLAMENLQRAIALNP 370



 Score = 65.9 bits (159), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 62/287 (21%), Positives = 126/287 (43%), Gaps = 13/287 (4%)

Query: 116 KAIEDLTQLVEDTSVDPKIKVNAHIKRAVVHLHAASDFTKAFADLDEAEKVDPNVADSYY 175
           +AI   TQ V+   ++P     A   R V +     +  +A AD D++ ++ P  A+++Y
Sbjct: 51  EAIASWTQAVK---LNPDFH-EAWYNRGVAYRKLGCN-QEAIADYDKSLEIKPENAEAWY 105

Query: 176 QRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQRHFVVHKMIVPGDRERVEQSLKEFR 235
            R        ++EEA+ + DK + + P +H A + R      +      ER E+++ ++ 
Sbjct: 106 NRANALRSLERFEEAIADYDKALQIRPEYHEAWSNRGNTFVNL------ERNEEAIADYD 159

Query: 236 NFVDTHSNVVEACTLFAQVLVDQEDFDGAEEYFNRSIRVDPENASLYVHRAMLMLQARGN 295
             +    +  EA       L     F  A   +NR++ + P     + +R + +  + G 
Sbjct: 160 KALAIRPDYYEAWYNRGMALKSLGKFAEAIASYNRALEIRPNLHQAWYNRGIALANS-GE 218

Query: 296 VDEAIKLIEKAISIDKSCMFAYETLGTIEVQRGRLEEAVKCFNKALPLARDEAELSHIYS 355
             EAI   +K +++  +    +   GT  VQ G+L+ A+  +++A+ L  D  E  +   
Sbjct: 219 FAEAIASYDKTLALKPNAWEVWNKRGTALVQSGQLDVAIASWDRAVELKPDYHEAWYNRG 278

Query: 356 LRDAAIAQMKVC-ERYNIKKKVSPRSQNITKNEKLAIKQLRENNDII 401
           L  A++ +       ++   +  P ++    N  +A+ +L    D I
Sbjct: 279 LALASLEKFAAAIASWDKSLEFHPDNREAWYNRGIALSKLERIEDAI 325



 Score = 57.8 bits (138), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 49/230 (21%), Positives = 107/230 (46%), Gaps = 14/230 (6%)

Query: 86  EEIESTSSNHTKALARLLRATVYIFTSQSTKAIEDLTQLVED-TSVDPKIKVNAHIKRAV 144
           E  E   +++ KALA  +R   Y        A++ L +  E   S +  +++  ++ +A 
Sbjct: 149 ERNEEAIADYDKALA--IRPDYYEAWYNRGMALKSLGKFAEAIASYNRALEIRPNLHQAW 206

Query: 145 ----VHLHAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIAL 200
               + L  + +F +A A  D+   + PN  + + +RG      GQ + A+ + D+ + L
Sbjct: 207 YNRGIALANSGEFAEAIASYDKTLALKPNAWEVWNKRGTALVQSGQLDVAIASWDRAVEL 266

Query: 201 NPNFHVARAQRHFVVHKMIVPGDRERVEQSLKEFRNFVDTHSNVVEACTLFAQVLVDQED 260
            P++H A   R   +  +      E+   ++  +   ++ H +  EA       L   E 
Sbjct: 267 KPDYHEAWYNRGLALASL------EKFAAAIASWDKSLEFHPDNREAWYNRGIALSKLER 320

Query: 261 FDGAEEYFNRSIRVDPENASLYVHRAMLMLQARGNVDEAIKLIEKAISID 310
            + A   +++ + + P++A+   H+A L  Q + N D A++ +++AI+++
Sbjct: 321 IEDAIASYDKVLEIKPDDAATLYHKAGLYCQ-QNNTDLAMENLQRAIALN 369



 Score = 50.4 bits (119), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 58/237 (24%), Positives = 98/237 (41%), Gaps = 12/237 (5%)

Query: 289 MLQARGNVDEAIKLIEK-------AISIDKSCMFAYETLGTIEVQRGRLEEAVKCFNKAL 341
           M+  R N  E +  IEK       A+ I      A    G   VQ GR +EA+  + +A+
Sbjct: 1   MILQRSNTLEKLASIEKPIASGNKAVEITPQNPQACYDQGNALVQLGRFQEAIASWTQAV 60

Query: 342 PLARD--EAELSHIYSLRDAAIAQMKVCERYNIKKKVSPRSQNITKNEKLAIKQLRENND 399
            L  D  EA  +   + R     Q  + + Y+   ++ P +     N   A++ L E  +
Sbjct: 61  KLNPDFHEAWYNRGVAYRKLGCNQEAIAD-YDKSLEIKPENAEAWYNRANALRSL-ERFE 118

Query: 400 IIIRPADKGGKTVVMDKADYTQKMTSILNSNDYEIIPGDPTKTIE-ESEKYGNLENESGQ 458
             I   DK  +        ++ +  + +N    E    D  K +    + Y    N    
Sbjct: 119 EAIADYDKALQIRPEYHEAWSNRGNTFVNLERNEEAIADYDKALAIRPDYYEAWYNRGMA 178

Query: 459 KHAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPN 515
             +   F +A A  + A ++ PN+  ++Y RG      G++ EA+ + DKT+AL PN
Sbjct: 179 LKSLGKFAEAIASYNRALEIRPNLHQAWYNRGIALANSGEFAEAIASYDKTLALKPN 235



 Score = 38.9 bits (89), Expect = 7.0,   Method: Compositional matrix adjust.
 Identities = 18/59 (30%), Positives = 34/59 (57%)

Query: 465 FTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQR 523
           F +A AD D+A ++ P   +++  RG  +    + EEA+ + DK +A+ P+++ A   R
Sbjct: 117 FEEAIADYDKALQIRPEYHEAWSNRGNTFVNLERNEEAIADYDKALAIRPDYYEAWYNR 175



 Score = 38.5 bits (88), Expect = 9.2,   Method: Compositional matrix adjust.
 Identities = 17/57 (29%), Positives = 33/57 (57%)

Query: 467 KAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQR 523
           +A AD D++ ++ P  A+++Y R        ++EEA+ + DK + + P +H A + R
Sbjct: 85  EAIADYDKSLEIKPENAEAWYNRANALRSLERFEEAIADYDKALQIRPEYHEAWSNR 141


>gi|427708000|ref|YP_007050377.1| serine/threonine protein kinase [Nostoc sp. PCC 7107]
 gi|427360505|gb|AFY43227.1| serine/threonine protein kinase with TPR repeats [Nostoc sp. PCC
           7107]
          Length = 700

 Score = 65.9 bits (159), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 75/377 (19%), Positives = 148/377 (39%), Gaps = 50/377 (13%)

Query: 153 FTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQRH 212
           +  A +  +EA  + P+ A  +  +G+      QY+ AL   +K I + P++  A + R 
Sbjct: 346 YQDALSAYEEAVNIRPDYAQGWNGQGKTLFKLKQYDTALMAYEKAIQIQPDYVDAWSGRG 405

Query: 213 FVVHKMIVPGDRERVEQSLKEFRNFVDTHSNVVEACTLFAQVLVDQEDFDGAEEYFNRSI 272
           F + K+      +R  +++  F   +  H +  E      ++  + + +D A   + ++I
Sbjct: 406 FTLQKL------QRYSEAIAAFDKALQLHDDYPEIWNAKGEIFTELKQYDNAIRAYEKAI 459

Query: 273 RVDPENASLYVHRAMLMLQARGNVDEAIKLIEKAISIDKSCMFAYETLGTIEVQRGRLEE 332
            +  +    +  +  L  Q   N +EAI   +KA+ I      A+   G   V   R E+
Sbjct: 460 NLKSDYVEAWYSKG-LAWQNLKNYNEAIAAYDKALEIKSDYYQAWYNRGNSLVNLNRYED 518

Query: 333 AVKCFNKALPLARD--EAELSH---IYSLRDAAIAQMKVCERYNIKKKVSPRSQNITKNE 387
           A   ++KA+   +    A LS    + +LR  A    +  E +N   K    +     N 
Sbjct: 519 AFTAYDKAVQYQQSYYPAWLSRGNVLITLRRYA----EAVESFNQVIKNDSDNYQAWYNI 574

Query: 388 KLAIKQLRENNDIIIRPADKGGKTVVMDKADYTQKMTSILNSNDYEIIPGDPTKTIEESE 447
             +  QL+   D I             +KA       + +  NDY++             
Sbjct: 575 GWSQHQLQRYADAI----------TAYNKA-------ATIKRNDYQL------------- 604

Query: 448 KYGNLENESGQKHAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLD 507
                 +    ++    + +A    + A + +P   +S+Y RG       +Y+EA+ + +
Sbjct: 605 ----WYSSGNSQYNLQKYPEAITAYNRAVRYNPKHYESWYSRGNALLNLNRYQEAIASYN 660

Query: 508 KTIALNPNFHVARAQRH 524
           + I   P++  A   RH
Sbjct: 661 QAIKYKPDYQQAITARH 677


>gi|67920503|ref|ZP_00514023.1| TPR repeat:TPR repeat [Crocosphaera watsonii WH 8501]
 gi|67857987|gb|EAM53226.1| TPR repeat:TPR repeat [Crocosphaera watsonii WH 8501]
          Length = 278

 Score = 65.9 bits (159), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 51/203 (25%), Positives = 90/203 (44%), Gaps = 7/203 (3%)

Query: 150 ASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARA 209
           A ++  A A   E+ K+DP  AD+YY RG  Y +  ++EE++ + D+ I L  +F  A  
Sbjct: 67  ARNYQGAIAAFSESIKLDPTDADAYYNRGYSYLVLEKFEESIEDYDQAIELKSDFAYAYG 126

Query: 210 QRHFVVHKMIVPGDRERVEQSLKEFRNFVDTHSNVVEACTLFAQVLVDQEDFDGAEEYFN 269
            R +  +++      +  EQ++ +    ++  S   +          D E  + A   +N
Sbjct: 127 NRCYAYYQL------KNHEQAITDCSKAIELESKYGDFYIYRGNAKDDLEMHEAAILDYN 180

Query: 270 RSIRVDPENASLYVHRAMLMLQARGNVDEAIKLIEKAISIDKSCMFAYETLGTIEVQRGR 329
           ++I + P N   Y +RA L     G   +A++   KAI  + +   AY   G    +   
Sbjct: 181 QAIIISPNNPKAYYNRA-LAYNRLGKSLQAVEDYSKAIQFNTNFADAYHNRGVTRFKLEE 239

Query: 330 LEEAVKCFNKALPLARDEAELSH 352
            E+A+    KA  L R +    H
Sbjct: 240 KEKAIADLRKAAQLFRQQGNTDH 262



 Score = 47.8 bits (112), Expect = 0.016,   Method: Compositional matrix adjust.
 Identities = 22/66 (33%), Positives = 37/66 (56%)

Query: 462 ASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARA 521
           A ++  A A   E+ K+DP  AD+YY RG  Y +  ++EE++ + D+ I L  +F  A  
Sbjct: 67  ARNYQGAIAAFSESIKLDPTDADAYYNRGYSYLVLEKFEESIEDYDQAIELKSDFAYAYG 126

Query: 522 QRHFVW 527
            R + +
Sbjct: 127 NRCYAY 132


>gi|75907774|ref|YP_322070.1| TPR repeat-containing serine/threonine protein kinase [Anabaena
           variabilis ATCC 29413]
 gi|75701499|gb|ABA21175.1| serine/threonine protein kinase with TPR repeats [Anabaena
           variabilis ATCC 29413]
          Length = 707

 Score = 65.9 bits (159), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 75/372 (20%), Positives = 149/372 (40%), Gaps = 50/372 (13%)

Query: 153 FTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQRH 212
           +  A +   +A  + P+ A ++Y +G+      QY++AL   DK I + P++  A + R 
Sbjct: 345 YKDALSAYKKAVDIRPDYAPAWYGKGKTLFRLKQYQDALTAYDKAIQIQPDYVEAWSGRG 404

Query: 213 FVVHKMIVPGDRERVEQSLKEFRNFVDTHSNVVEACTLFAQVLVDQEDFDGAEEYFNRSI 272
           F +  +      +R  +++  F   +  + N  E      +   + + +D A + ++++I
Sbjct: 405 FSLQSL------QRYAEAIASFDKALQLNENYPEVWNARGEAFSNLKQYDRAIKSYDKAI 458

Query: 273 RVDPENASLYVHRAMLMLQARGNVDEAIKLIEKAISIDKSCMFAYETLGTIEVQRGRLEE 332
               +    + ++  L LQ+    +EAI    KAI I      A+  LG   V   R E+
Sbjct: 459 EFKSDAYESFYNKG-LALQSLKEYNEAINAYNKAIEIKSDYERAWYNLGNSLVNLNRYED 517

Query: 333 AVKCFNKALPLARDEAELSHIYSLRDAAIAQM-----KVCERYNIKKKVSPRSQNITKNE 387
           A K ++KA+    D A    I  L    +  +     +  E +N   K +P S      +
Sbjct: 518 AFKAYDKAVQYKTDYA----IAWLSKGNVLIILRRYPEAIESFNQVIKFNPNSYQAWYGK 573

Query: 388 KLAIKQLRENNDIIIRPADKGGKTVVMDKADYTQKMTSILNSNDYEIIPGDPTKTIEESE 447
             +  Q +   + I    +   K   +  ++Y Q   S+ NS                  
Sbjct: 574 GWSQHQNQRYAEAI----ESYKKAATIKPSNY-QVWYSLGNS------------------ 610

Query: 448 KYGNLENESGQKHAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLD 507
                      ++    + +A A  ++A +  P   +S+Y RG       QY++A+ + +
Sbjct: 611 -----------QYILQQYQEAIASYNKAVRYQPKHIESWYSRGNALFSLKQYQDAIASYE 659

Query: 508 KTIALNPNFHVA 519
           + I   P++  A
Sbjct: 660 QAIKHKPDYSQA 671



 Score = 46.6 bits (109), Expect = 0.030,   Method: Compositional matrix adjust.
 Identities = 53/289 (18%), Positives = 122/289 (42%), Gaps = 31/289 (10%)

Query: 147 LHAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHV 206
           L +   + +A A  D+A +++ N  + +  RG+ +    QY+ A+++ DK I    + + 
Sbjct: 407 LQSLQRYAEAIASFDKALQLNENYPEVWNARGEAFSNLKQYDRAIKSYDKAIEFKSDAYE 466

Query: 207 ARAQRHFVVHKMIVPGDRERVEQSLKEFRNFVDTHSNVVE-------ACTLFAQVLVDQE 259
           +   +   +             QSLKE+   ++ ++  +E       A       LV+  
Sbjct: 467 SFYNKGLAL-------------QSLKEYNEAINAYNKAIEIKSDYERAWYNLGNSLVNLN 513

Query: 260 DFDGAEEYFNRSIRVDPENASLYVHRAMLMLQARGNVDEAIKLIEKAISIDKSCMFAYET 319
            ++ A + ++++++   + A  ++ +  +++  R    EAI+   + I  + +   A+  
Sbjct: 514 RYEDAFKAYDKAVQYKTDYAIAWLSKGNVLIILR-RYPEAIESFNQVIKFNPNSYQAWYG 572

Query: 320 LGTIEVQRGRLEEAVKCFNKALPLARDEAELSHIYSLRDAAIAQMKVCE---RYNIKKKV 376
            G  + Q  R  EA++ + KA  +     ++   YSL ++     +  E    YN   + 
Sbjct: 573 KGWSQHQNQRYAEAIESYKKAATIKPSNYQV--WYSLGNSQYILQQYQEAIASYNKAVRY 630

Query: 377 SPRSQNITKNEKLAIKQLRENNDIIIRPADKGGKTVVMDKADYTQKMTS 425
            P+      +   A+  L++  D I        +  +  K DY+Q + +
Sbjct: 631 QPKHIESWYSRGNALFSLKQYQDAI-----ASYEQAIKHKPDYSQAINA 674


>gi|434406332|ref|YP_007149217.1| tetratricopeptide repeat protein [Cylindrospermum stagnale PCC
           7417]
 gi|428260587|gb|AFZ26537.1| tetratricopeptide repeat protein [Cylindrospermum stagnale PCC
           7417]
          Length = 496

 Score = 65.9 bits (159), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 43/197 (21%), Positives = 90/197 (45%), Gaps = 7/197 (3%)

Query: 151 SDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQ 210
            ++ +A A  ++   + P+   ++Y RG       +Y EA+ + +K IA+ P+ H A   
Sbjct: 291 GNYQQAIASYEKVIAIKPDYYQAWYNRGNALRQLQRYSEAIASYEKAIAIKPDLHQAWNN 350

Query: 211 RHFVVHKMIVPGDRERVEQSLKEFRNFVDTHSNVVEACTLFAQVLVDQEDFDGAEEYFNR 270
           R F + ++      +R   ++  +   +    +  EA       LV+ + +  A   + +
Sbjct: 351 RGFALSEL------KRYSDAIASYEKALAIKPDYHEAWNNRGNALVELKRYSDAIASWEK 404

Query: 271 SIRVDPENASLYVHRAMLMLQARGNVDEAIKLIEKAISIDKSCMFAYETLGTIEVQRGRL 330
            + + P++   + +R + + + +    EAI   EKA++I      A+   G       R 
Sbjct: 405 GLAIKPDDHEAWYNRGLALSELK-RYSEAIASYEKALAIKPDLYQAWNNRGIALFNLKRY 463

Query: 331 EEAVKCFNKALPLARDE 347
           EEA+K F+KA+ +  D+
Sbjct: 464 EEALKSFDKAISINPDD 480



 Score = 65.9 bits (159), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 83/408 (20%), Positives = 157/408 (38%), Gaps = 76/408 (18%)

Query: 152 DFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQR 211
           ++ +A A  ++A  +  + AD++  RG       +Y++AL + DK +A+ P+   A   R
Sbjct: 126 NYQQAIASYEKAIAIKSDYADAWNNRGSALGNLQRYKDALASFDKALAIKPDDADAWNNR 185

Query: 212 HFVVHKMIVPGDRERVEQSLKEFRNFVDTHSNVVEACTLFAQVLVDQEDFDGAEEYFNRS 271
              +      G+ +R + +L  F   +    +  EA       L + + +  A   F+++
Sbjct: 186 GSAL------GNLQRYKDALASFDKALAIKPDYAEAWNNRGSALANLQRYSDAIASFDKA 239

Query: 272 IRVDPENASLYVHR-AMLMLQAR----------------------------GNVDEAIKL 302
           I ++P++     +R  +L L  R                            GN  +AI  
Sbjct: 240 ISINPDDQIAINNRETLLKLLGRMPINVYAGSETVQKAEDFFNQGNDYAVQGNYQQAIAS 299

Query: 303 IEKAISIDKSCMFAYETLGTIEVQRGRLEEAVKCFNKALPLARDEAELSHIYSLRDAAIA 362
            EK I+I      A+   G    Q  R  EA+  + KA+ +  D   L   ++ R  A++
Sbjct: 300 YEKVIAIKPDYYQAWYNRGNALRQLQRYSEAIASYEKAIAIKPD---LHQAWNNRGFALS 356

Query: 363 QMK----VCERYNIKKKVSPRSQNITKNEKLAIKQLRENNDIIIRPADKGGKTVVMDKAD 418
           ++K        Y     + P       N   A+ +L+  +D I               A 
Sbjct: 357 ELKRYSDAIASYEKALAIKPDYHEAWNNRGNALVELKRYSDAI---------------AS 401

Query: 419 YTQKMTSILNSNDYEIIPGDPTKTIEESEKYGNLENESGQKHAASDFTKAFADLDEAEKV 478
           + + +          I P D             L+           +++A A  ++A  +
Sbjct: 402 WEKGLA---------IKPDDHEAWYNRGLALSELKR----------YSEAIASYEKALAI 442

Query: 479 DPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQRHFV 526
            P++  ++  RG       +YEEAL++ DK I++NP+  +A   R  V
Sbjct: 443 KPDLYQAWNNRGIALFNLKRYEEALKSFDKAISINPDDQLAINNRQAV 490



 Score = 59.3 bits (142), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 58/257 (22%), Positives = 114/257 (44%), Gaps = 31/257 (12%)

Query: 295 NVDEAIKLIEKAISIDKSCMFAYETLGTIEVQRGRLEEAVKCFNKALPLARDEAELSHIY 354
           N  +AI   EKAI+I      A+   G+      R ++A+  F+KAL +  D+A+    +
Sbjct: 126 NYQQAIASYEKAIAIKSDYADAWNNRGSALGNLQRYKDALASFDKALAIKPDDAD---AW 182

Query: 355 SLRDAAIAQMK----VCERYNIKKKVSPRSQNITKNEKLAIKQLRENNDII--------I 402
           + R +A+  ++        ++    + P       N   A+  L+  +D I        I
Sbjct: 183 NNRGSALGNLQRYKDALASFDKALAIKPDYAEAWNNRGSALANLQRYSDAIASFDKAISI 242

Query: 403 RPADKGGKTVVMDKADYTQKMTSILNSNDYEIIPGDPTKTIEESEKYGNLENESGQKHAA 462
            P D+    + ++  +   K+   +  N Y       ++T++++E + N  N+   +   
Sbjct: 243 NPDDQ----IAINNRETLLKLLGRMPINVYA-----GSETVQKAEDFFNQGNDYAVQ--- 290

Query: 463 SDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQ 522
            ++ +A A  ++   + P+   ++Y RG       +Y EA+ + +K IA+ P+ H A   
Sbjct: 291 GNYQQAIASYEKVIAIKPDYYQAWYNRGNALRQLQRYSEAIASYEKAIAIKPDLHQAWNN 350

Query: 523 RHFVWTSTLAELMAFSD 539
           R F     L+EL  +SD
Sbjct: 351 RGFA----LSELKRYSD 363



 Score = 50.4 bits (119), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 64/294 (21%), Positives = 132/294 (44%), Gaps = 32/294 (10%)

Query: 258 QEDFDGAEEYFNRSIRVDPENASLYVHRAMLMLQARGNVD---EAIKLIEKAISIDKSCM 314
           Q+++  A   + ++I +  + A  + +R      A GN+    +A+   +KA++I     
Sbjct: 124 QQNYQQAIASYEKAIAIKSDYADAWNNRG----SALGNLQRYKDALASFDKALAIKPDDA 179

Query: 315 FAYETLGTIEVQRGRLEEAVKCFNKALPLARDEAELSHIYSLRDAAIAQMKVCERYNIKK 374
            A+   G+      R ++A+  F+KAL +  D AE    ++ R +A+A +   +RY+   
Sbjct: 180 DAWNNRGSALGNLQRYKDALASFDKALAIKPDYAE---AWNNRGSALANL---QRYSDAI 233

Query: 375 KVSPRSQNITKNEKLAIKQLRENNDIIIRPADKGGKTVVMDKADYTQKMTSILN-SNDYE 433
               ++ +I  ++++AI     N + +++   +    V    ++  QK     N  NDY 
Sbjct: 234 ASFDKAISINPDDQIAI----NNRETLLKLLGRMPINVYAG-SETVQKAEDFFNQGNDYA 288

Query: 434 IIPGDPTKTIEESEK--------YGNLENESGQKHAASDFTKAFADLDEAEKVDPNVADS 485
           +  G+  + I   EK        Y    N          +++A A  ++A  + P++  +
Sbjct: 289 V-QGNYQQAIASYEKVIAIKPDYYQAWYNRGNALRQLQRYSEAIASYEKAIAIKPDLHQA 347

Query: 486 YYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQRHFVWTSTLAELMAFSD 539
           +  RG       +Y +A+ + +K +A+ P++H A   R     + L EL  +SD
Sbjct: 348 WNNRGFALSELKRYSDAIASYEKALAIKPDYHEAWNNR----GNALVELKRYSD 397



 Score = 40.8 bits (94), Expect = 1.9,   Method: Compositional matrix adjust.
 Identities = 19/66 (28%), Positives = 39/66 (59%)

Query: 153 FTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQRH 212
           +++A A  ++A  + P++  ++  RG       +YEEAL++ DK I++NP+  +A   R 
Sbjct: 429 YSEAIASYEKALAIKPDLYQAWNNRGIALFNLKRYEEALKSFDKAISINPDDQLAINNRQ 488

Query: 213 FVVHKM 218
            V+ ++
Sbjct: 489 AVLKQL 494


>gi|40063047|gb|AAR37903.1| TPR domain/sulfotransferase domain protein [uncultured marine
           bacterium 560]
          Length = 723

 Score = 65.9 bits (159), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 75/369 (20%), Positives = 151/369 (40%), Gaps = 49/369 (13%)

Query: 149 AASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVAR 208
           A   F KA A       + P+  +  Y  G  +   GQ + A++  +  +A+NP    A 
Sbjct: 64  AVKSFEKALA-------IKPDYTEVNYNLGLTFQELGQLDAAVKCYEDVLAVNPEHAEAH 116

Query: 209 AQRHFVVHKMIVPGDRERVEQSLKEFRNFVDTHSNVVEACTLFAQVLVDQEDFDGAEEYF 268
                 + ++      E+++ ++K +   +    +  EA       L +    D A + +
Sbjct: 117 NNLGVTLKEL------EQLDAAVKSYEKAIAIKPDYAEAHNNLGNALKELGQLDVAVKSY 170

Query: 269 NRSIRVDPENASLYVHRAMLMLQARGNVDEAIKLIEKAISIDKSCMFAYETLGTIEVQRG 328
            ++I + P+ A  + +     LQ  G +DEA+K  E+AI+I      AY  LG +  + G
Sbjct: 171 EKAIAIKPDFAETHNNLGN-ALQGLGQLDEAVKSYEQAIAIQSDFSNAYYNLGNVLRELG 229

Query: 329 RLEEAVKCFNKALPLARDEAELSHIYSLRDAAIAQM-KVCERYNIKKKVSPRSQNITKNE 387
           +L++AVK + KA+ +  D  E  +        + Q+ +  + Y     +     N   N 
Sbjct: 230 QLDDAVKSYEKAIAIKPDYDEAHNNLGNALQGLGQLDEAVKSYEQAIAIQSDFSNAYYNL 289

Query: 388 KLAIKQLRENNDIIIRPADKGGKTVVMDKADYTQKMTSILNSNDYEIIPGDPTKTIEESE 447
              +++L +     +  A +  K  ++ K DY +   ++                     
Sbjct: 290 GNVLRELGQ-----VDTAVRSYKKAIVIKPDYAKAHNNL--------------------- 323

Query: 448 KYGNLENESGQKHAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLD 507
             G    + GQ         A  +L++A  + P+ A++++  G      GQ + A++  +
Sbjct: 324 --GIALQDLGQ------MDTAVKNLEKAIAITPDFAEAHHNLGIALQDLGQIDAAVKGYE 375

Query: 508 KTIALNPNF 516
           K IA+ P++
Sbjct: 376 KAIAIKPDY 384



 Score = 64.7 bits (156), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 96/422 (22%), Positives = 180/422 (42%), Gaps = 48/422 (11%)

Query: 27  IKTYLKSFPNDPILQPDGLSNGVELTNGDTNESHELDLLSKAKRAFEHEDYLTAIRHCTE 86
           IK   K FPN+P+L    +S     T G      +LD+   A ++FE      AI+    
Sbjct: 34  IKVLTKDFPNEPLLY--NISGVCYKTIG------QLDV---AVKSFEKA---LAIKPDYT 79

Query: 87  EIESTSSNHTKALARLLRATVYIFTSQSTKAIEDLTQLVEDTSVDPKIKVNAHIKRAVVH 146
           E+        + L +L           + K  ED+       +V+P+    AH    V  
Sbjct: 80  EVNYNLGLTFQELGQL---------DAAVKCYEDVL------AVNPE-HAEAHNNLGVT- 122

Query: 147 LHAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHV 206
           L        A    ++A  + P+ A+++   G      GQ + A+++ +K IA+ P+F  
Sbjct: 123 LKELEQLDAAVKSYEKAIAIKPDYAEAHNNLGNALKELGQLDVAVKSYEKAIAIKPDF-- 180

Query: 207 ARAQRHFVVHKMIVPGDRERVEQSLKEFRNFVDTHSNVVEACTLFAQVLVDQEDFDGAEE 266
             A+ H  +   +      ++++++K +   +   S+   A      VL +    D A +
Sbjct: 181 --AETHNNLGNAL--QGLGQLDEAVKSYEQAIAIQSDFSNAYYNLGNVLRELGQLDDAVK 236

Query: 267 YFNRSIRVDPENASLYVHRAMLMLQARGNVDEAIKLIEKAISIDKSCMFAYETLGTIEVQ 326
            + ++I + P+    + +     LQ  G +DEA+K  E+AI+I      AY  LG +  +
Sbjct: 237 SYEKAIAIKPDYDEAHNNLGN-ALQGLGQLDEAVKSYEQAIAIQSDFSNAYYNLGNVLRE 295

Query: 327 RGRLEEAVKCFNKALPLARDEAELSHIYSLRDAAIAQMKVCERYNIKK--KVSPRSQNIT 384
            G+++ AV+ + KA+ +  D A+  +   +    + QM    + N++K   ++P      
Sbjct: 296 LGQVDTAVRSYKKAIVIKPDYAKAHNNLGIALQDLGQMDTAVK-NLEKAIAITPDFAEAH 354

Query: 385 KNEKLAIKQLRENNDIIIRPADKGGKTVVMDKADYTQKMTSILNSNDYEIIPGDPTKTIE 444
            N  +A++ L +     I  A KG +  +  K DY +   ++     Y     DP  +I 
Sbjct: 355 HNLGIALQDLGQ-----IDAAVKGYEKAIAIKPDYAEAYHNLSYLKKY--TANDPQISIM 407

Query: 445 ES 446
           +S
Sbjct: 408 QS 409



 Score = 53.1 bits (126), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 70/374 (18%), Positives = 148/374 (39%), Gaps = 74/374 (19%)

Query: 143 AVVHLHAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNP 202
           +V+ L+++    +A   +    K  PN    Y   G  Y   GQ + A+++ +K +A+ P
Sbjct: 17  SVITLYSSGKINEAIDAIKVLTKDFPNEPLLYNISGVCYKTIGQLDVAVKSFEKALAIKP 76

Query: 203 NFHVARAQRHFVVHKMIVPGDRERVEQSLKEFRNFVDTHSNVVEACTLFAQVLVDQEDFD 262
           ++            ++       +++ ++K + + +  +    EA       L + E  D
Sbjct: 77  DYTEVNYNLGLTFQEL------GQLDAAVKCYEDVLAVNPEHAEAHNNLGVTLKELEQLD 130

Query: 263 GAEEYFNRSIRVDPENASLYVHRAMLMLQARGNVDEAIKLIEKAISIDKSCMFAYETLGT 322
            A + + ++I + P+ A  + +     L+  G +D A+K  EKAI+I       +  LG 
Sbjct: 131 AAVKSYEKAIAIKPDYAEAHNNLGN-ALKELGQLDVAVKSYEKAIAIKPDFAETHNNLGN 189

Query: 323 IEVQRGRLEEAVKCFNKALPLARDEAELSHIYSLRDAAIAQMKVCERYNIKKKVSPRSQN 382
                G+L+EAVK + +A+ +   +++ S+ Y               YN+          
Sbjct: 190 ALQGLGQLDEAVKSYEQAIAI---QSDFSNAY---------------YNLGN-------- 223

Query: 383 ITKNEKLAIKQLRENNDIIIRPADKGGKTVVMDKADYTQKMTSILNSNDYEIIPGDPTKT 442
                   +++L + +D +     K  +  +  K DY +   ++                
Sbjct: 224 -------VLRELGQLDDAV-----KSYEKAIAIKPDYDEAHNNL---------------- 255

Query: 443 IEESEKYGNLENESGQKHAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEA 502
                  GN     GQ        +A    ++A  +  + +++YY  G +    GQ + A
Sbjct: 256 -------GNALQGLGQ------LDEAVKSYEQAIAIQSDFSNAYYNLGNVLRELGQVDTA 302

Query: 503 LRNLDKTIALNPNF 516
           +R+  K I + P++
Sbjct: 303 VRSYKKAIVIKPDY 316



 Score = 50.1 bits (118), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 53/250 (21%), Positives = 104/250 (41%), Gaps = 15/250 (6%)

Query: 277 ENASLYVHR----AMLMLQARGNVDEAIKLIEKAISIDKSCMFAYETLGTIEVQRGRLEE 332
           EN  L + R    +++ L + G ++EAI  I+       +    Y   G      G+L+ 
Sbjct: 4   ENIQLALSREQVDSVITLYSSGKINEAIDAIKVLTKDFPNEPLLYNISGVCYKTIGQLDV 63

Query: 333 AVKCFNKALPLARDEAELSHIYSLRDAAIAQMKVCER-YNIKKKVSPRSQNITKNEKLAI 391
           AVK F KAL +  D  E+++   L    + Q+    + Y     V+P       N  + +
Sbjct: 64  AVKSFEKALAIKPDYTEVNYNLGLTFQELGQLDAAVKCYEDVLAVNPEHAEAHNNLGVTL 123

Query: 392 KQLRENNDIIIRPADKGGKTVVMDKADYTQKMTSILNS----NDYEIIPGDPTKTIEESE 447
           K+L +     +  A K  +  +  K DY +   ++ N+       ++      K I    
Sbjct: 124 KELEQ-----LDAAVKSYEKAIAIKPDYAEAHNNLGNALKELGQLDVAVKSYEKAIAIKP 178

Query: 448 KYGNLENESGQK-HAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNL 506
            +    N  G          +A    ++A  +  + +++YY  G +    GQ ++A+++ 
Sbjct: 179 DFAETHNNLGNALQGLGQLDEAVKSYEQAIAIQSDFSNAYYNLGNVLRELGQLDDAVKSY 238

Query: 507 DKTIALNPNF 516
           +K IA+ P++
Sbjct: 239 EKAIAIKPDY 248


>gi|125972957|ref|YP_001036867.1| hypothetical protein Cthe_0436 [Clostridium thermocellum ATCC
           27405]
 gi|256005713|ref|ZP_05430669.1| Tetratricopeptide TPR_2 repeat protein [Clostridium thermocellum
           DSM 2360]
 gi|385779127|ref|YP_005688292.1| hypothetical protein Clo1313_1785 [Clostridium thermocellum DSM
           1313]
 gi|419722668|ref|ZP_14249807.1| Tetratricopeptide TPR_2 repeat-containing protein [Clostridium
           thermocellum AD2]
 gi|419725248|ref|ZP_14252299.1| Tetratricopeptide TPR_2 repeat-containing protein [Clostridium
           thermocellum YS]
 gi|125713182|gb|ABN51674.1| Tetratricopeptide TPR_1 repeat-containing protein [Clostridium
           thermocellum ATCC 27405]
 gi|255990344|gb|EEU00470.1| Tetratricopeptide TPR_2 repeat protein [Clostridium thermocellum
           DSM 2360]
 gi|316940807|gb|ADU74841.1| Tetratricopeptide TPR_1 repeat-containing protein [Clostridium
           thermocellum DSM 1313]
 gi|380771334|gb|EIC05203.1| Tetratricopeptide TPR_2 repeat-containing protein [Clostridium
           thermocellum YS]
 gi|380781328|gb|EIC10987.1| Tetratricopeptide TPR_2 repeat-containing protein [Clostridium
           thermocellum AD2]
          Length = 1056

 Score = 65.9 bits (159), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 103/470 (21%), Positives = 183/470 (38%), Gaps = 63/470 (13%)

Query: 58  ESHELDLLSKAKRAFEHEDYLTAIRHCTEEIESTSSNHTKAL---ARLLRATVYIFTSQS 114
           ++ ++  L K    F  +D       C E+  + S +H       A +LR        + 
Sbjct: 577 DAEDIGALVKKSGVFFRQDKFEEALKCIEDAMALSLDHHALYYYKAEILRNM-----GKP 631

Query: 115 TKAIEDLTQLVEDTSVDPKIKVNAHIKRAVVHLHAASDFTKAFADLDEAEKVDPNVADSY 174
            +AIE   + +E     P    N +I RA   L+   ++ KA    ++A  +D    + Y
Sbjct: 632 EEAIEFFDKYIEKVPNHP----NPYIGRAK-SLYVMQEYEKALECCEKAISLDDKYIEGY 686

Query: 175 YQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQRHFVVHKMIVPGDRERVEQSLKEF 234
           Y +  I     +YE+ L  LDK   ++P F +    R  V  +M   G+ E+   +L+E 
Sbjct: 687 YSKAHILLQMDKYEDVLELLDKIKEIDPEFPMFYYDRAEVFKRM---GNHEK---ALQEI 740

Query: 235 RNFVDTHSNVVEACTLFAQVLVDQEDFDGAEEYFNRSIRVDPENASLYVHRAMLMLQARG 294
             +++   +   A    A +L      D A E  +++I  +PE    Y  +  + L   G
Sbjct: 741 DIYLEKFPDDGYAHEKRANILFTLGRLDEAIEECDKAIEFEPELLDAYYGKGYI-LYYTG 799

Query: 295 NVDEAIKLIEKAISIDKSCMFAYETLGTIEVQRGRLEEAVKCFNKALPLARDEAE----L 350
              E++   +K I ++    +AY + G      G  E A++ +N A+ L  + AE    +
Sbjct: 800 RFKESLSYFDKVIELNSKSAYAYYSKGNALKYLGDFEGALENYNYAINLWHEFAECYSAI 859

Query: 351 SHIYSLRDAAIAQMKVCERYNIKKKVSPRSQNITKNEKLAIKQLRENNDIIIRPADKGGK 410
            H+Y L       M   +R    + + P                       I P   G  
Sbjct: 860 GHLYFLVGNYTNSMIFYDR---AESLKPD---------------------YIYPY-IGKS 894

Query: 411 TVVMDKADYTQKMTSILNSNDYEIIPGDPTKTIEESEKYGNLENESGQKHAA-SDFTKAF 469
            + M   D    M S +  +D         K +E S     + N  G+       F +A 
Sbjct: 895 QLYMTLGD----MESAIRYSD---------KALEISPDDAEVHNNKGKILGYFGMFDEAV 941

Query: 470 ADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVA 519
           +    A +++ + A+ YY  G  Y +  ++E A+ + +K I L P +  A
Sbjct: 942 SSFLTAIELNDSQAEYYYNLGNAYLMINEFENAIESYNKAINLYPEYEAA 991



 Score = 60.1 bits (144), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 53/225 (23%), Positives = 111/225 (49%), Gaps = 8/225 (3%)

Query: 112 SQSTKAIEDLTQLVEDTSV-DPKIKVNAHIKRAVVHLHAASDFTKAFADLDEAEKVDPNV 170
           + + K ++++  +VE + + D   K+   +K      H    F +A    D+A  VD + 
Sbjct: 317 ADALKVLDNILNIVEASDIRDRNEKICTLLKCKGEAFHIMGKFNEAIECYDKALAVDKDR 376

Query: 171 ADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQRHFVVHKMIVPGDRERVEQS 230
           AD   ++G+ Y   G  +EA+   +K + +  ++++A    +F++   +     +  + +
Sbjct: 377 ADVLVKKGEAYNRLGMPQEAILMYEKALGVRNDYYIA----YFLMG--VTYKHLDEYQLA 430

Query: 231 LKEFRNFVDTHSNVVEACTLFAQVLVDQEDFDGAEEYFNRSIRVDPENASLYVHRAMLML 290
           L+ F  +++    V EA    A+VL   + ++ A+E  ++++ + P+  S   +R  L+L
Sbjct: 431 LEAFDCYINAVPKVPEAYVERAEVLQFMQRYEEAKEDCDQALVLRPQFGSA-CYRKSLIL 489

Query: 291 QARGNVDEAIKLIEKAISIDKSCMFAYETLGTIEVQRGRLEEAVK 335
              G  DEAI+++EK +  ++ C  A    G      GR EEA++
Sbjct: 490 CELGKYDEAIEILEKLLDDEEFCDIAGYFKGVALKNLGRYEEALE 534



 Score = 53.9 bits (128), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 87/385 (22%), Positives = 173/385 (44%), Gaps = 60/385 (15%)

Query: 172 DSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQRHFVVHKMIVPGDRERVEQSL 231
           ++Y   G    + G+YEE +R  ++ +ALNP      ++ +F+  +      R R  ++L
Sbjct: 52  EAYVNLGYTLIILGKYEECIRYCNRALALNPQ---DASELYFIKAECFKKMKRYR--EAL 106

Query: 232 KEFRNFVDTHSNVVEACTLFAQVLVDQEDFDGAEEYFNR----SIRVDPENASLYVHRAM 287
           + +   V+    V     L A +L D E++D A E F+      ++ + +  S+++++  
Sbjct: 107 ENYIKAVEIRKRVFYLIPL-AILLYDMEEYDKALEIFDTLEALDLKYNDDLESIFLYKGK 165

Query: 288 LMLQARGNVDEAIKLIEKAISIDKSCMFAYETLGTIEVQRGR-------LEEAVKCFNKA 340
           +M + +G   EAI   +KA+ ++ +    Y+   +     GR       ++E++  + KA
Sbjct: 166 IM-EKKGRFKEAIDYFDKALEVNPANAEIYDKKASSLYYLGRDTDDMDLIKESIIYYRKA 224

Query: 341 LPLARDEAELSHIYSLRDAAIAQMKVCER-------YNIKKKVSP-----------RSQN 382
           L     E +  +++SL   A++ ++V          Y+   +V P              N
Sbjct: 225 L-----EIDGEYLHSLNGIAVS-LEVLGNADEALIYYDKALEVYPDFVLVHYNKANLLMN 278

Query: 383 ITKNEKL------AIKQLRENNDIIIRPADKGGKTVVMDK-ADYTQKMTSILNSNDYEII 435
           +++NE+       AI+  R   D  I  A+   K   M+K AD  + + +ILN     I+
Sbjct: 279 LSRNEEALYHYDKAIQIDRYCVDAYIEKAELLCK---MEKYADALKVLDNILN-----IV 330

Query: 436 PGDPTKTIEESEKYGNLENESGQK-HAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYC 494
                +  + +EK   L    G+  H    F +A    D+A  VD + AD   ++G+ Y 
Sbjct: 331 EASDIR--DRNEKICTLLKCKGEAFHIMGKFNEAIECYDKALAVDKDRADVLVKKGEAYN 388

Query: 495 LFGQYEEALRNLDKTIALNPNFHVA 519
             G  +EA+   +K + +  ++++A
Sbjct: 389 RLGMPQEAILMYEKALGVRNDYYIA 413



 Score = 53.5 bits (127), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 95/485 (19%), Positives = 195/485 (40%), Gaps = 96/485 (19%)

Query: 77  YLTAIRHCTEEIESTSSNHTKALARLLRATVYIFTSQSTKAIEDLTQLVED--TSVDPKI 134
           Y   IR+C         N   AL     + +Y   ++  K ++   + +E+   +V+ + 
Sbjct: 67  YEECIRYC---------NRALALNPQDASELYFIKAECFKKMKRYREALENYIKAVEIRK 117

Query: 135 KVNAHIKRAVVHLHAASDFTKAFADLDEAEKVDPNVADS----YYQRGQIYCLFGQYEEA 190
           +V   I  A++ L+   ++ KA    D  E +D    D     +  +G+I    G+++EA
Sbjct: 118 RVFYLIPLAIL-LYDMEEYDKALEIFDTLEALDLKYNDDLESIFLYKGKIMEKKGRFKEA 176

Query: 191 LRNLDKTIALNP-NFHVARAQRHFVVHKMIVPGDRERVEQSLKEFRNFVDTHSNVVEACT 249
           +   DK + +NP N  +   +   + +      D + +++S+  +R  ++     + +  
Sbjct: 177 IDYFDKALEVNPANAEIYDKKASSLYYLGRDTDDMDLIKESIIYYRKALEIDGEYLHSLN 236

Query: 250 LFAQVLVDQEDFDGAEEYFNRSIRVDPENASLYVHRAMLMLQARGNVDEAIKLIEKAISI 309
             A  L    + D A  Y+++++ V P+   ++ ++A L++    N +EA+   +KAI I
Sbjct: 237 GIAVSLEVLGNADEALIYYDKALEVYPDFVLVHYNKANLLMNLSRN-EEALYHYDKAIQI 295

Query: 310 DKSCMFAY---------------------ETLGTIEVQ---------------------- 326
           D+ C+ AY                       L  +E                        
Sbjct: 296 DRYCVDAYIEKAELLCKMEKYADALKVLDNILNIVEASDIRDRNEKICTLLKCKGEAFHI 355

Query: 327 RGRLEEAVKCFNKALPLARDEAELSHIYSLRDAAIAQMKVCERYNIKKKVSPRSQNITKN 386
            G+  EA++C++KAL + +D A++             +K  E YN  +   P+   +   
Sbjct: 356 MGKFNEAIECYDKALAVDKDRADV------------LVKKGEAYN--RLGMPQEAILMYE 401

Query: 387 EKLAIKQLRENNDIIIRPADKGGKTVVMDKADYT-QKMTSILNSNDYEIIPGDPTKTIEE 445
           + L ++     ND  I     G     +D+     +     +N+     +P  P   +E 
Sbjct: 402 KALGVR-----NDYYIAYFLMGVTYKHLDEYQLALEAFDCYINA-----VPKVPEAYVER 451

Query: 446 SEKYGNLENESGQKHAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRN 505
           +E    ++           + +A  D D+A  + P    + Y++  I C  G+Y+EA+  
Sbjct: 452 AEVLQFMQR----------YEEAKEDCDQALVLRPQFGSACYRKSLILCELGKYDEAIEI 501

Query: 506 LDKTI 510
           L+K +
Sbjct: 502 LEKLL 506



 Score = 50.1 bits (118), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 45/183 (24%), Positives = 86/183 (46%), Gaps = 12/183 (6%)

Query: 138  AHIKRAVVHLH-AASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDK 196
            A    A+ HL+    ++T +    D AE + P+    Y  + Q+Y   G  E A+R  DK
Sbjct: 853  AECYSAIGHLYFLVGNYTNSMIFYDRAESLKPDYIYPYIGKSQLYMTLGDMESAIRYSDK 912

Query: 197  TIALNPNFHVARAQRHFVVHKMIVPGDRERVEQSLKEFRNFVDTHSNVVEACTLFAQVLV 256
             + ++P+     A+ H   +K  + G     ++++  F   ++ + +  E         +
Sbjct: 913  ALEISPD----DAEVH--NNKGKILGYFGMFDEAVSSFLTAIELNDSQAEYYYNLGNAYL 966

Query: 257  DQEDFDGAEEYFNRSIRVDPENASLYVH--RAMLMLQARGNVDEAIKLIEKAISIDKSCM 314
               +F+ A E +N++I + PE  + YV   +A + L+   N++EA+K   KAI ++    
Sbjct: 967  MINEFENAIESYNKAINLYPEYEAAYVGIGKAQMCLE---NIEEALKNFNKAIELNPRSA 1023

Query: 315  FAY 317
             AY
Sbjct: 1024 EAY 1026



 Score = 44.7 bits (104), Expect = 0.12,   Method: Compositional matrix adjust.
 Identities = 53/212 (25%), Positives = 92/212 (43%), Gaps = 25/212 (11%)

Query: 147  LHAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNF-- 204
            L    DF  A  + + A  +    A+ Y   G +Y L G Y  ++   D+  +L P++  
Sbjct: 829  LKYLGDFEGALENYNYAINLWHEFAECYSAIGHLYFLVGNYTNSMIFYDRAESLKPDYIY 888

Query: 205  -HVARAQRHFVVHKMIVPGDRERV----EQSLKEFRNFVDTHSNVVEACTLFAQVLVDQE 259
             ++ ++Q +  +      GD E      +++L+   +  + H+N  +    F        
Sbjct: 889  PYIGKSQLYMTL------GDMESAIRYSDKALEISPDDAEVHNNKGKILGYFGM------ 936

Query: 260  DFDGAEEYFNRSIRVDPENASLY--VHRAMLMLQARGNVDEAIKLIEKAISIDKSCMFAY 317
             FD A   F  +I ++   A  Y  +  A LM+    N   AI+   KAI++      AY
Sbjct: 937  -FDEAVSSFLTAIELNDSQAEYYYNLGNAYLMINEFEN---AIESYNKAINLYPEYEAAY 992

Query: 318  ETLGTIEVQRGRLEEAVKCFNKALPLARDEAE 349
              +G  ++    +EEA+K FNKA+ L    AE
Sbjct: 993  VGIGKAQMCLENIEEALKNFNKAIELNPRSAE 1024



 Score = 42.0 bits (97), Expect = 0.90,   Method: Compositional matrix adjust.
 Identities = 71/359 (19%), Positives = 141/359 (39%), Gaps = 46/359 (12%)

Query: 168 PNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQRHFVVHKMIVPGDRERV 227
           P V ++Y +R ++     +YEEA  + D+ + L P F  A  ++  ++ ++       + 
Sbjct: 442 PKVPEAYVERAEVLQFMQRYEEAKEDCDQALVLRPQFGSACYRKSLILCEL------GKY 495

Query: 228 EQSLKEFRNFVDTHSNVVEACTLFAQVLVDQEDFDGAEEYFNRSIRVDPENASLYVHRAM 287
           +++++     +D       A       L +   ++ A EY +  I   P     Y+ +A 
Sbjct: 496 DEAIEILEKLLDDEEFCDIAGYFKGVALKNLGRYEEALEYVDGYITKYPGYREPYLEKAD 555

Query: 288 LMLQARGNVDEAIKLIEKAISIDKSCMFAYETLGTIEVQRGRLEEAVKCFNKALPLARDE 347
           +++ A    ++A++     +  D   + A      +  ++ + EEA+KC   A+ L+ D 
Sbjct: 556 ILI-ALEEYEKAMEACNVLLDRDAEDIGALVKKSGVFFRQDKFEEALKCIEDAMALSLDH 614

Query: 348 AELSHIYSLRDAAIAQMKVCERYNIKKKVSPRSQNITKNEKLAIKQLRENNDIIIRPADK 407
             L                   Y  K ++    +N+ K E+             I   DK
Sbjct: 615 HAL-------------------YYYKAEIL---RNMGKPEE------------AIEFFDK 640

Query: 408 GGKTVVMDKADYTQKMTSILNSNDYEIIPGDPTKTIEESEKYGNLENESGQKHAASDFTK 467
             + V      Y  +  S+    +YE       K I   +KY  +E    + H      K
Sbjct: 641 YIEKVPNHPNPYIGRAKSLYVMQEYEKALECCEKAISLDDKY--IEGYYSKAHILLQMDK 698

Query: 468 ---AFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQR 523
                  LD+ +++DP     YY R +++   G +E+AL+ +D  +   P+   A  +R
Sbjct: 699 YEDVLELLDKIKEIDPEFPMFYYDRAEVFKRMGNHEKALQEIDIYLEKFPDDGYAHEKR 757


>gi|196018208|ref|XP_002118767.1| hypothetical protein TRIADDRAFT_62778 [Trichoplax adhaerens]
 gi|190578271|gb|EDV18747.1| hypothetical protein TRIADDRAFT_62778 [Trichoplax adhaerens]
          Length = 904

 Score = 65.9 bits (159), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 57/256 (22%), Positives = 112/256 (43%), Gaps = 31/256 (12%)

Query: 168 PNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNP-----NFHVARAQRHFVVHKMIVPG 222
           P++A +Y   G +Y   G+Y++AL   +K++ + P     N  +  A  H +    I  G
Sbjct: 497 PSIATTYNNIGGVYLHQGKYDDALSMYNKSLKIQPTQLGDNHLIIPATYHNIGSVYIHQG 556

Query: 223 DRE----RVEQSLK-EFRNFVDTHSNVVEACTLFAQVLVDQEDFDGAEEYFNRSIRVD-- 275
             +       +SLK +   F D H ++    +   QV   Q  +D A   +N+S++++  
Sbjct: 557 KYDDALSMYNKSLKIQLTQFGDNHLSITVTYSNIGQVYNHQGKYDDALSMYNKSLKIELT 616

Query: 276 ------PENASLYVHRAMLMLQARGNVDEAIKLIEKAISI--------DKSCMFAYETLG 321
                 P  A+ Y++   +  + +G  D+A+ +  K++ I          S    Y  +G
Sbjct: 617 QLGDNHPSIATTYINIGSVY-KDQGKYDDALSMYNKSLKILLTQLGDNHPSIALTYNNIG 675

Query: 322 TIEVQRGRLEEAVKCFNKALPLARDEAELSHIYSLRDAAIAQMKVCERYNIKKKVSPRSQ 381
            +   +G+ ++A+  +NK+L +   + + +H       AI    V + YN + K      
Sbjct: 676 QVYRDQGKYDDALSMYNKSLKIRLTQLDDNH----PSIAITYSNVGQVYNDQGKYDDALS 731

Query: 382 NITKNEKLAIKQLREN 397
              K+ K+ + QL  N
Sbjct: 732 MYNKSLKIKLTQLGHN 747



 Score = 57.4 bits (137), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 72/367 (19%), Positives = 157/367 (42%), Gaps = 45/367 (12%)

Query: 168 PNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQRHFVVHKMIVPGDRE-R 226
           P++A +Y+  G +Y   G Y++AL   +K++ +                ++   GD    
Sbjct: 396 PSIATTYHNIGGVYNDQGNYDDALSMYNKSLKI----------------QLTQLGDNHPS 439

Query: 227 VEQSLKEFRNFVDTHSNVVEACTLFAQVLVDQEDFDGAEEYFNRSIRV--------DPEN 278
           +  +        +   N+         V  DQ  +D A   +N+S+++         P  
Sbjct: 440 IAATYHNIGVVYNHQGNIATIYHNIGVVYEDQGKYDDALSMYNKSLKIRQTQLGDNHPSI 499

Query: 279 ASLYVHRAMLMLQARGNVDEAIKLIEKAISIDKSCMF--------AYETLGTIEVQRGRL 330
           A+ Y +   + L  +G  D+A+ +  K++ I  + +          Y  +G++ + +G+ 
Sbjct: 500 ATTYNNIGGVYLH-QGKYDDALSMYNKSLKIQPTQLGDNHLIIPATYHNIGSVYIHQGKY 558

Query: 331 EEAVKCFNKALPLARDEAELSHIYSLRDAAIAQMKVCERYNIKKKVSPRSQNITKNEKLA 390
           ++A+  +NK+L +   +   +H+       +    + + YN + K         K+ K+ 
Sbjct: 559 DDALSMYNKSLKIQLTQFGDNHL----SITVTYSNIGQVYNHQGKYDDALSMYNKSLKIE 614

Query: 391 IKQLRENNDIIIRPADKGGKTVVMDKADYTQKMTSILNSNDYEIIP--GDPTKTIEES-E 447
           + QL +N+  I       G +V  D+  Y   + S+ N +   ++   GD   +I  +  
Sbjct: 615 LTQLGDNHPSIATTYINIG-SVYKDQGKYDDAL-SMYNKSLKILLTQLGDNHPSIALTYN 672

Query: 448 KYGNLENESGQ-KHAASDFTKAFA-DLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRN 505
             G +  + G+   A S + K+    L + +   P++A +Y   GQ+Y   G+Y++AL  
Sbjct: 673 NIGQVYRDQGKYDDALSMYNKSLKIRLTQLDDNHPSIAITYSNVGQVYNDQGKYDDALSM 732

Query: 506 LDKTIAL 512
            +K++ +
Sbjct: 733 YNKSLKI 739



 Score = 55.1 bits (131), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 80/396 (20%), Positives = 165/396 (41%), Gaps = 39/396 (9%)

Query: 149 AASDFTKAFA-DLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALN----PN 203
           A S + K+   DL +     P++A +Y   GQ+Y   G+Y++AL   +K++ +N     N
Sbjct: 40  ALSMYNKSLKIDLTQLGDNHPSIAVTYCNIGQVYNHQGKYDDALSVYNKSLKINLTQVNN 99

Query: 204 FHVARAQRHFVVHKMIVPGDR-----ERVEQSLK-EFRNFVDTHSNVVEACTLFAQVLVD 257
            H + A  +  +  + +   +         +SLK       D H ++    +    V   
Sbjct: 100 NHPSIATTYLNIGGVYIHQGKYDDALSMFNKSLKIRLTQLGDNHPSIAVTYSNIGLVYNH 159

Query: 258 QEDFDGAEEYFNRSIRVD--------PENASLYVHRAMLMLQARGNVDEAIKLIEKAISI 309
           Q  +D A   +N+S+++         P  A  Y H    +    G  D+A+ +  K++ I
Sbjct: 160 QGKYDDALSMYNKSLKIQLTQLNDNHPSIAMTY-HNIGDVYSDSGKYDDALSMYNKSLKI 218

Query: 310 D--------KSCMFAYETLGTIEVQRGRLEEAVKCFNKALPLARDEAELSHIYSLRDAAI 361
                     S    Y ++G +   +G+ ++A+  +NK+L +   + + +H       A+
Sbjct: 219 QLTQLNNNHPSIATTYHSIGKVYKDQGKYDDALSMYNKSLKILLTQLDDNH----PSIAV 274

Query: 362 AQMKVCERYNIKKKVSPRSQNITKNEKLAIKQLRENNDIIIRPADKGGKTVVMDKADYTQ 421
               +   Y  + K         K+ K+ + QL +N+  I       G +V  D+  Y  
Sbjct: 275 TYSNIGLVYKYQGKYDDALSMYNKSLKIQLIQLDDNHPSIATTYHNIG-SVYRDQGKYDD 333

Query: 422 KMTSILNSNDYEIIPGDPTKTIEESEKYGNL----ENESGQKHAASDFTKAFA-DLDEAE 476
            + S+ N +   ++          +  Y N+     +++    A S + K+    L + +
Sbjct: 334 AL-SMYNKSLKILLTQLNDNHPSIAATYHNIADVYNHQAKYDDALSMYNKSLKIKLTQLD 392

Query: 477 KVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIAL 512
              P++A +Y+  G +Y   G Y++AL   +K++ +
Sbjct: 393 DNHPSIATTYHNIGGVYNDQGNYDDALSMYNKSLKI 428



 Score = 52.8 bits (125), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 69/365 (18%), Positives = 145/365 (39%), Gaps = 58/365 (15%)

Query: 168 PNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQRHFVVHKMIVPGDRERV 227
           P++A +Y   GQ+Y   G+Y++AL   +K++ +                           
Sbjct: 18  PSIAVTYSNIGQVYNDQGKYDDALSMYNKSLKI--------------------------- 50

Query: 228 EQSLKEFRNFVDTHSNVVEACTLFAQVLVDQEDFDGAEEYFNRSIRVD--------PENA 279
                +     D H ++        QV   Q  +D A   +N+S++++        P  A
Sbjct: 51  -----DLTQLGDNHPSIAVTYCNIGQVYNHQGKYDDALSVYNKSLKINLTQVNNNHPSIA 105

Query: 280 SLYVHRAMLMLQARGNVDEAIKLIEKAISI--------DKSCMFAYETLGTIEVQRGRLE 331
           + Y++   + +  +G  D+A+ +  K++ I          S    Y  +G +   +G+ +
Sbjct: 106 TTYLNIGGVYIH-QGKYDDALSMFNKSLKIRLTQLGDNHPSIAVTYSNIGLVYNHQGKYD 164

Query: 332 EAVKCFNKALPLARDEAELSHIYSLRDAAIAQMKVCERYNIKKKVSPRSQNITKNEKLAI 391
           +A+  +NK+L +   +   +H       A+    + + Y+   K         K+ K+ +
Sbjct: 165 DALSMYNKSLKIQLTQLNDNH----PSIAMTYHNIGDVYSDSGKYDDALSMYNKSLKIQL 220

Query: 392 KQLRENNDIIIRPADKGGKTVVMDKADYTQKMTSILNSNDYEIIPGD---PTKTIEESEK 448
            QL  N+  I       GK V  D+  Y   ++    S    +   D   P+  +  S  
Sbjct: 221 TQLNNNHPSIATTYHSIGK-VYKDQGKYDDALSMYNKSLKILLTQLDDNHPSIAVTYSNI 279

Query: 449 YGNLENESGQKHAASDFTKAFA-DLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLD 507
               + +     A S + K+    L + +   P++A +Y+  G +Y   G+Y++AL   +
Sbjct: 280 GLVYKYQGKYDDALSMYNKSLKIQLIQLDDNHPSIATTYHNIGSVYRDQGKYDDALSMYN 339

Query: 508 KTIAL 512
           K++ +
Sbjct: 340 KSLKI 344



 Score = 52.0 bits (123), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 67/315 (21%), Positives = 131/315 (41%), Gaps = 45/315 (14%)

Query: 228 EQSLK-EFRNFVDTHSNVVEACTLFAQVLVDQEDFDGAEEYFNRSIRVD--------PEN 278
            +SLK +     D+H ++    +   QV  DQ  +D A   +N+S+++D        P  
Sbjct: 3   NKSLKIKLTQLGDSHPSIAVTYSNIGQVYNDQGKYDDALSMYNKSLKIDLTQLGDNHPSI 62

Query: 279 ASLYVHRAMLMLQARGNVDEAIKLIEKAISID--------KSCMFAYETLGTIEVQRGRL 330
           A  Y +   +    +G  D+A+ +  K++ I+         S    Y  +G + + +G+ 
Sbjct: 63  AVTYCNIGQVY-NHQGKYDDALSVYNKSLKINLTQVNNNHPSIATTYLNIGGVYIHQGKY 121

Query: 331 EEAVKCFNKALPLARDEAELSHIYSLRDAAIAQMKVCERYNIKKKVSPRSQNITKNEKLA 390
           ++A+  FNK+L +   +   +H       A+    +   YN + K         K+ K+ 
Sbjct: 122 DDALSMFNKSLKIRLTQLGDNH----PSIAVTYSNIGLVYNHQGKYDDALSMYNKSLKIQ 177

Query: 391 IKQLRENNDIIIRPADKGGKTVVMDKADYTQKMT----------SILNSNDYEIIPGDPT 440
           + QL +N+  I       G  V  D   Y   ++          + LN+N   I     +
Sbjct: 178 LTQLNDNHPSIAMTYHNIGD-VYSDSGKYDDALSMYNKSLKIQLTQLNNNHPSIATTYHS 236

Query: 441 --KTIEESEKYGNLENESGQKHAASDFTKAFAD-LDEAEKVDPNVADSYYQRGQIYCLFG 497
             K  ++  KY +         A S + K+    L + +   P++A +Y   G +Y   G
Sbjct: 237 IGKVYKDQGKYDD---------ALSMYNKSLKILLTQLDDNHPSIAVTYSNIGLVYKYQG 287

Query: 498 QYEEALRNLDKTIAL 512
           +Y++AL   +K++ +
Sbjct: 288 KYDDALSMYNKSLKI 302



 Score = 49.7 bits (117), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 46/214 (21%), Positives = 99/214 (46%), Gaps = 33/214 (15%)

Query: 168 PNVADSYYQRGQIYCLFGQYEEALRNLDKTIA-----LNPNFHVARAQRHFVVHKMIVPG 222
           P++A +Y   GQ+Y   G+Y++AL   +K++      L+ N H + A  +  V +  V  
Sbjct: 665 PSIALTYNNIGQVYRDQGKYDDALSMYNKSLKIRLTQLDDN-HPSIAITYSNVGQ--VYN 721

Query: 223 DRERVEQSLKEFRNFV--------DTHSNVVEACTLFAQVLVDQEDFDGAEEYFNRSIRV 274
           D+ + + +L  +   +          H ++       A V  DQ  +D A   +N+S+++
Sbjct: 722 DQGKYDDALSMYNKSLKIKLTQLGHNHPSIAATYHSIADVYKDQGKYDDALSMYNKSLKI 781

Query: 275 --------DPENASLYVHRAMLMLQARGNVDEAIKLIEKAISIDKSCMF--------AYE 318
                    P  A+ Y H   ++ + +G  D+A+ +  K++ I  + +          Y 
Sbjct: 782 KLTQLNDNHPSIATTY-HNIGVVYKDQGEYDDALSMCNKSLKIQLTQLGHNHPGIAATYN 840

Query: 319 TLGTIEVQRGRLEEAVKCFNKALPLARDEAELSH 352
           ++G+I   +G+ ++A+  +NK+L +   +   +H
Sbjct: 841 SIGSIYKDQGKYDDALSMYNKSLKIKLTQLGHNH 874


>gi|428318228|ref|YP_007116110.1| Tetratricopeptide TPR_1 repeat-containing protein [Oscillatoria
           nigro-viridis PCC 7112]
 gi|428241908|gb|AFZ07694.1| Tetratricopeptide TPR_1 repeat-containing protein [Oscillatoria
           nigro-viridis PCC 7112]
          Length = 729

 Score = 65.9 bits (159), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 48/183 (26%), Positives = 89/183 (48%), Gaps = 7/183 (3%)

Query: 165 KVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQRHFVVHKMIVPGDR 224
           ++ P+ A +Y   G +    GQ EEA+R   + IALNP+F  A A    +++K      +
Sbjct: 45  ELQPDWAAAYVTMGNVQQASGQIEEAMRFYSEAIALNPDFAEAYANLGSMLYK------Q 98

Query: 225 ERVEQSLKEFRNFVDTHSNVVEACTLFAQVLVDQEDFDGAEEYFNRSIRVDPENASLYVH 284
            R+ +++  ++  ++   N+  A    A  L  Q   D A  Y  +++ ++P  A +  H
Sbjct: 99  GRLVEAIVNYQKAIELKPNLAAAYWNLAGALKQQGQQDAAVAYEQKALELNPHLAQVDFH 158

Query: 285 RAMLMLQAR-GNVDEAIKLIEKAISIDKSCMFAYETLGTIEVQRGRLEEAVKCFNKALPL 343
             +    AR G +DEA+   ++AI+       AY  +G +   +G+ ++A+    KAL +
Sbjct: 159 LNLGDKLARQGKLDEAVAAWQQAIAFKPDLAEAYCQIGRVLRHQGQFKDAIPNLQKALEI 218

Query: 344 ARD 346
             D
Sbjct: 219 KPD 221



 Score = 45.1 bits (105), Expect = 0.100,   Method: Compositional matrix adjust.
 Identities = 28/97 (28%), Positives = 53/97 (54%), Gaps = 1/97 (1%)

Query: 247 ACTLFAQVLVDQEDFDGAEEYFNRSIRVDPENASLYVHRAMLMLQARGNVDEAIKLIEKA 306
           + T+ A+    Q +   A     R++ + P+ A+ YV    +  QA G ++EA++   +A
Sbjct: 19  SLTVIAETYYSQGNLAAAVAACRRALELQPDWAAAYVTMGNVQ-QASGQIEEAMRFYSEA 77

Query: 307 ISIDKSCMFAYETLGTIEVQRGRLEEAVKCFNKALPL 343
           I+++     AY  LG++  ++GRL EA+  + KA+ L
Sbjct: 78  IALNPDFAEAYANLGSMLYKQGRLVEAIVNYQKAIEL 114



 Score = 40.4 bits (93), Expect = 2.4,   Method: Compositional matrix adjust.
 Identities = 51/231 (22%), Positives = 99/231 (42%), Gaps = 43/231 (18%)

Query: 292 ARGNVDEAIKLIEKAISIDKSCMFAYETLGTIEVQRGRLEEAVKCFNKALPLARDEAELS 351
           ++GN+  A+    +A+ +      AY T+G ++   G++EEA++ +++A+ L  D AE  
Sbjct: 29  SQGNLAAAVAACRRALELQPDWAAAYVTMGNVQQASGQIEEAMRFYSEAIALNPDFAEAY 88

Query: 352 HIYSLRDAAIAQMKVCE---RYNIKKKVSPRSQNITKNEKLAIKQLRENNDIIIRPADKG 408
              +L      Q ++ E    Y    ++ P       N   A+KQ  + +  +       
Sbjct: 89  A--NLGSMLYKQGRLVEAIVNYQKAIELKPNLAAAYWNLAGALKQQGQQDAAVA------ 140

Query: 409 GKTVVMDKADYTQKMTSI---LNSNDYEIIPGDPTKTIEESEKYGNLENESGQKHAASDF 465
                     Y QK   +   L   D+ +  GD      +  + G L+            
Sbjct: 141 ----------YEQKALELNPHLAQVDFHLNLGD------KLARQGKLD------------ 172

Query: 466 TKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNF 516
            +A A   +A    P++A++Y Q G++    GQ+++A+ NL K + + P+F
Sbjct: 173 -EAVAAWQQAIAFKPDLAEAYCQIGRVLRHQGQFKDAIPNLQKALEIKPDF 222



 Score = 38.9 bits (89), Expect = 7.9,   Method: Compositional matrix adjust.
 Identities = 20/77 (25%), Positives = 41/77 (53%), Gaps = 6/77 (7%)

Query: 134 IKVNAHIKRAVVHLHAASDFTK------AFADLDEAEKVDPNVADSYYQRGQIYCLFGQY 187
           +++N H+ +   HL+      +      A A   +A    P++A++Y Q G++    GQ+
Sbjct: 146 LELNPHLAQVDFHLNLGDKLARQGKLDEAVAAWQQAIAFKPDLAEAYCQIGRVLRHQGQF 205

Query: 188 EEALRNLDKTIALNPNF 204
           ++A+ NL K + + P+F
Sbjct: 206 KDAIPNLQKALEIKPDF 222


>gi|386813211|ref|ZP_10100435.1| conserved hypothetical protein [planctomycete KSU-1]
 gi|386814261|ref|ZP_10101485.1| conserved hypothetical protein [planctomycete KSU-1]
 gi|386402708|dbj|GAB63316.1| conserved hypothetical protein [planctomycete KSU-1]
 gi|386403758|dbj|GAB64366.1| conserved hypothetical protein [planctomycete KSU-1]
          Length = 254

 Score = 65.9 bits (159), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 46/188 (24%), Positives = 87/188 (46%), Gaps = 7/188 (3%)

Query: 156 AFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQRHFVV 215
           A     +A +++PN A+++Y  G +Y   G  EEA+    KT+ ++PNF  A      V 
Sbjct: 33  AMRSFQQAIEINPNSAEAHYNLGIVYHEKGMMEEAINEYKKTLEIDPNFVKAYNNLGVVY 92

Query: 216 HKMIVPGDRERVEQSLKEFRNFVDTHSNVVEACTLFAQVLVDQEDFDGAEEYFNRSIRVD 275
           H      +  R+++++   +  V+     VEA          ++ ++ A   F +++  +
Sbjct: 93  H------NAGRLDEAVGSLKKAVELSPQYVEAYYNLGIAYYKKKQYNDAAGAFEKAVEFN 146

Query: 276 PENASLYVHRAMLMLQARGNVDEAIKLIEKAISIDKSCMFAYETLGTIEVQRGRLEEAVK 335
           P     Y +   ++  +  N+DEAI   +KA  I+     AY  LG    ++   ++A++
Sbjct: 147 PAFDKGYYNLG-IVYSSMDNLDEAIDAFKKATEINPKYSNAYYNLGVTYAKKDHYDDAIQ 205

Query: 336 CFNKALPL 343
              KAL L
Sbjct: 206 SLQKALEL 213



 Score = 47.4 bits (111), Expect = 0.021,   Method: Compositional matrix adjust.
 Identities = 26/84 (30%), Positives = 46/84 (54%), Gaps = 1/84 (1%)

Query: 261 FDGAEEYFNRSIRVDPENASLYVHRAMLMLQARGNVDEAIKLIEKAISIDKSCMFAYETL 320
            D A   F ++I ++P +A  + +   ++   +G ++EAI   +K + ID + + AY  L
Sbjct: 30  LDAAMRSFQQAIEINPNSAEAHYNLG-IVYHEKGMMEEAINEYKKTLEIDPNFVKAYNNL 88

Query: 321 GTIEVQRGRLEEAVKCFNKALPLA 344
           G +    GRL+EAV    KA+ L+
Sbjct: 89  GVVYHNAGRLDEAVGSLKKAVELS 112



 Score = 46.2 bits (108), Expect = 0.047,   Method: Compositional matrix adjust.
 Identities = 43/217 (19%), Positives = 98/217 (45%), Gaps = 12/217 (5%)

Query: 117 AIEDLTQLVEDTSVDPKIKVNAHIKRAVVHLHAASDFTKAFADLDEAEKVDPNVADSYYQ 176
           A+    Q +E   ++P     AH    +V+ H      +A  +  +  ++DPN   +Y  
Sbjct: 33  AMRSFQQAIE---INPN-SAEAHYNLGIVY-HEKGMMEEAINEYKKTLEIDPNFVKAYNN 87

Query: 177 RGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQRHFVVHKMIVPGDRERVEQSLKEFRN 236
            G +Y   G+ +EA+ +L K + L+P +  A        +K      +++   +   F  
Sbjct: 88  LGVVYHNAGRLDEAVGSLKKAVELSPQYVEAYYNLGIAYYK------KKQYNDAAGAFEK 141

Query: 237 FVDTHSNVVEACTLFAQVLVDQEDFDGAEEYFNRSIRVDPENASLYVHRAMLMLQARGNV 296
            V+ +    +       V    ++ D A + F ++  ++P+ ++ Y +  +   + + + 
Sbjct: 142 AVEFNPAFDKGYYNLGIVYSSMDNLDEAIDAFKKATEINPKYSNAYYNLGVTYAK-KDHY 200

Query: 297 DEAIKLIEKAISIDKSCMFAYETLGTIEVQRGRLEEA 333
           D+AI+ ++KA+ ++ +   A+  LG I   + + +EA
Sbjct: 201 DDAIQSLQKALELNPNNYNAHFALGVIHQTKRKTKEA 237



 Score = 41.2 bits (95), Expect = 1.5,   Method: Compositional matrix adjust.
 Identities = 43/200 (21%), Positives = 79/200 (39%), Gaps = 14/200 (7%)

Query: 79  TAIRHCTEEIESTSSNHTKALARLLRATVYIFTSQSTKAIEDLTQLVEDTSVDPKIKVNA 138
            A+R   + IE    N   A A      VY       +AI +  + +E   +DP   V A
Sbjct: 32  AAMRSFQQAIEI---NPNSAEAHYNLGIVYHEKGMMEEAINEYKKTLE---IDPNF-VKA 84

Query: 139 HIKRAVVHLHAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTI 198
           +    VV+ H A    +A   L +A ++ P   ++YY  G  Y    QY +A    +K +
Sbjct: 85  YNNLGVVY-HNAGRLDEAVGSLKKAVELSPQYVEAYYNLGIAYYKKKQYNDAAGAFEKAV 143

Query: 199 ALNPNFHVARAQRHFVVHKMIVPGDRERVEQSLKEFRNFVDTHSNVVEACTLFAQVLVDQ 258
             NP F         V   M      + +++++  F+   + +     A          +
Sbjct: 144 EFNPAFDKGYYNLGIVYSSM------DNLDEAIDAFKKATEINPKYSNAYYNLGVTYAKK 197

Query: 259 EDFDGAEEYFNRSIRVDPEN 278
           + +D A +   +++ ++P N
Sbjct: 198 DHYDDAIQSLQKALELNPNN 217


>gi|334121455|ref|ZP_08495523.1| Tetratricopeptide TPR_1 repeat-containing protein [Microcoleus
            vaginatus FGP-2]
 gi|333454974|gb|EGK83641.1| Tetratricopeptide TPR_1 repeat-containing protein [Microcoleus
            vaginatus FGP-2]
          Length = 1052

 Score = 65.9 bits (159), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 76/311 (24%), Positives = 145/311 (46%), Gaps = 27/311 (8%)

Query: 229  QSLKEFRNFVDTHSNVVE-----ACTLFAQ--VLVDQEDFDGAEEYFNRSIRVDPENASL 281
            +S + +++ +D +   +E     A T   Q   L + E ++ A E F ++I +DPE+   
Sbjct: 734  ESAERYKDALDCYQKALELDQGNASTFVGQGVALGNLERYEEALESFEKAIDLDPESVDA 793

Query: 282  YVHRAMLMLQARGNVD---EAIKLIEKAISIDKSCMFAYETLGTIEVQRGRLEEAVKCFN 338
            + +R  +    +GN++   E ++  EKA+ +D   ++A+   G       R EEA++ + 
Sbjct: 794  WANRGAV----QGNLERYEEGLESCEKALHLDPKSVYAWVNRGNTLNNLERYEEALESYQ 849

Query: 339  KALPLARDEAELSHIYSLRDAAIAQMK----VCERYNIKKKVSPRSQNITKNEKLAIKQL 394
            KAL LA    +    +  R   + +++      E Y     ++P+S +   N+ +A+  L
Sbjct: 850  KALDLAPKSVD---AWVKRGNMLRKLERYEEALESYQKVIDLAPKSVDAWVNQGIALLDL 906

Query: 395  RENNDIIIRPADKGGKTVVMD-KADYTQKMT-SILNSNDYEIIPGDPTKTIEESEKYGNL 452
             E  + +    D+  K    + +A  TQ +  S+L + +  I   D   ++   E    L
Sbjct: 907  -ERYEEVFTACDRAFKIDSKNLQALNTQALALSLLKNFEKAITAIDEAISLNPQEVI--L 963

Query: 453  ENESGQKHA-ASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIA 511
                G   A A  +T+A A+ ++A + +P     YY +   Y L G+ E+A+ NL K I 
Sbjct: 964  RANRGIILARAGRYTEALAECEQAIEQNPKHESGYYGKACCYALQGEIEQAIDNLQKAID 1023

Query: 512  LNPNFHVARAQ 522
            + P F   +A+
Sbjct: 1024 IAPRFSRNQAK 1034



 Score = 53.9 bits (128), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 43/199 (21%), Positives = 88/199 (44%), Gaps = 7/199 (3%)

Query: 145 VHLHAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNF 204
           V L     + +A    ++A  +DP   D++  RG +     +YEE L + +K + L+P  
Sbjct: 765 VALGNLERYEEALESFEKAIDLDPESVDAWANRGAVQGNLERYEEGLESCEKALHLDPKS 824

Query: 205 HVARAQRHFVVHKMIVPGDRERVEQSLKEFRNFVDTHSNVVEACTLFAQVLVDQEDFDGA 264
             A   R   ++ +      ER E++L+ ++  +D     V+A      +L   E ++ A
Sbjct: 825 VYAWVNRGNTLNNL------ERYEEALESYQKALDLAPKSVDAWVKRGNMLRKLERYEEA 878

Query: 265 EEYFNRSIRVDPENASLYVHRAMLMLQARGNVDEAIKLIEKAISIDKSCMFAYETLGTIE 324
            E + + I + P++   +V++ + +L      +E     ++A  ID   + A  T     
Sbjct: 879 LESYQKVIDLAPKSVDAWVNQGIALLDLE-RYEEVFTACDRAFKIDSKNLQALNTQALAL 937

Query: 325 VQRGRLEEAVKCFNKALPL 343
                 E+A+   ++A+ L
Sbjct: 938 SLLKNFEKAITAIDEAISL 956



 Score = 43.5 bits (101), Expect = 0.27,   Method: Compositional matrix adjust.
 Identities = 27/90 (30%), Positives = 49/90 (54%), Gaps = 2/90 (2%)

Query: 121  LTQLVEDTSVDPKIKVNAHIKRAVVHLHAASDFTKAFADLDEAEKVDPNVADSYYQRGQI 180
            +T + E  S++P+ +V     R ++ L  A  +T+A A+ ++A + +P     YY +   
Sbjct: 947  ITAIDEAISLNPQ-EVILRANRGII-LARAGRYTEALAECEQAIEQNPKHESGYYGKACC 1004

Query: 181  YCLFGQYEEALRNLDKTIALNPNFHVARAQ 210
            Y L G+ E+A+ NL K I + P F   +A+
Sbjct: 1005 YALQGEIEQAIDNLQKAIDIAPRFSRNQAK 1034


>gi|257061342|ref|YP_003139230.1| hypothetical protein Cyan8802_3576 [Cyanothece sp. PCC 8802]
 gi|256591508|gb|ACV02395.1| Tetratricopeptide TPR_2 repeat protein [Cyanothece sp. PCC 8802]
          Length = 261

 Score = 65.9 bits (159), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 49/204 (24%), Positives = 92/204 (45%), Gaps = 7/204 (3%)

Query: 149 AASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVAR 208
            A ++  A AD  +A ++ P   DSYY RG  Y + G+ ++AL + +  I LNP F  A 
Sbjct: 47  GAGNYQGAIADFTQAIQLAPQDPDSYYNRGYAYHIIGKIDQALADYNLAIQLNPQFAYAY 106

Query: 209 AQRHFVVHKMIVPGDRERVEQSLKEFRNFVDTHSNVVEACTLFAQVLVDQEDFDGAEEYF 268
             R +  ++M      +  +++L +    +  + N  +          D  +   A   +
Sbjct: 107 GNRCYAFYQM------KDYQKALSDCSEAIKLNPNYADFYIYRGNAQDDLGNHQAAIADY 160

Query: 269 NRSIRVDPENASLYVHRAMLMLQARGNVDEAIKLIEKAISIDKSCMFAYETLGTIEVQRG 328
             +IR++   A  Y +RA+   +A+  + EAI    K++ +D +   AY   G  + + G
Sbjct: 161 TEAIRLNSNYAKAYYNRALAYNRAQL-LPEAIADYTKSVQLDPNFADAYYNRGITQFKLG 219

Query: 329 RLEEAVKCFNKALPLARDEAELSH 352
              EA+    KA  L + +   ++
Sbjct: 220 NESEAIADLQKASQLFKTQGNTTY 243



 Score = 50.1 bits (118), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 25/74 (33%), Positives = 39/74 (52%)

Query: 454 NESGQKHAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALN 513
           N+   K  A ++  A AD  +A ++ P   DSYY RG  Y + G+ ++AL + +  I LN
Sbjct: 40  NQGVDKIGAGNYQGAIADFTQAIQLAPQDPDSYYNRGYAYHIIGKIDQALADYNLAIQLN 99

Query: 514 PNFHVARAQRHFVW 527
           P F  A   R + +
Sbjct: 100 PQFAYAYGNRCYAF 113



 Score = 40.4 bits (93), Expect = 2.1,   Method: Compositional matrix adjust.
 Identities = 22/65 (33%), Positives = 33/65 (50%)

Query: 464 DFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQR 523
           D+ KA +D  EA K++PN AD Y  RG      G ++ A+ +  + I LN N+  A   R
Sbjct: 118 DYQKALSDCSEAIKLNPNYADFYIYRGNAQDDLGNHQAAIADYTEAIRLNSNYAKAYYNR 177

Query: 524 HFVWT 528
              + 
Sbjct: 178 ALAYN 182



 Score = 40.0 bits (92), Expect = 3.0,   Method: Compositional matrix adjust.
 Identities = 62/243 (25%), Positives = 101/243 (41%), Gaps = 34/243 (13%)

Query: 270 RSIRVDPENASLYVHRAMLMLQARGNVDEAIKLIEKAISIDKSCMFAYETLGTIEVQRGR 329
           +S    P NA  + ++ +  + A GN   AI    +AI +      +Y   G      G+
Sbjct: 26  QSTNNSPSNAVGWYNQGVDKIGA-GNYQGAIADFTQAIQLAPQDPDSYYNRGYAYHIIGK 84

Query: 330 LEEAVKCFNKALPLARDEAELSHIYSLRDAAIAQMKVCERYNIKKKVSPRSQNITKNEKL 389
           +++A+  +N A+ L     + ++ Y  R  A  QMK     + +K +S  S+ I  N   
Sbjct: 85  IDQALADYNLAIQL---NPQFAYAYGNRCYAFYQMK-----DYQKALSDCSEAIKLNPNY 136

Query: 390 AIKQLRENNDIIIRPADKGGKTVVMDKADYTQKMTSILNSNDYEIIPGDPTKTIEESEKY 449
           A   +   N       D G     +  ADYT+ +   LNSN               ++ Y
Sbjct: 137 ADFYIYRGN----AQDDLGNHQAAI--ADYTEAIR--LNSN--------------YAKAY 174

Query: 450 GNLENESGQKHAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKT 509
               N +   + A    +A AD  ++ ++DPN AD+YY RG      G   EA+ +L K 
Sbjct: 175 ---YNRALAYNRAQLLPEAIADYTKSVQLDPNFADAYYNRGITQFKLGNESEAIADLQKA 231

Query: 510 IAL 512
             L
Sbjct: 232 SQL 234


>gi|402771088|ref|YP_006590625.1| hypothetical protein BN69_0523 [Methylocystis sp. SC2]
 gi|401773108|emb|CCJ05974.1| Tetratricopeptide TPR_1 repeat-containing protein [Methylocystis
           sp. SC2]
          Length = 291

 Score = 65.9 bits (159), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 50/182 (27%), Positives = 82/182 (45%), Gaps = 41/182 (22%)

Query: 160 LDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQRHFVVHKMI 219
           L E  + +P+ A++Y  RG  Y   G+++EA+ +  + I L PN   A   R   + +M 
Sbjct: 67  LTEVIRRNPSSAEAYDTRGVAYARVGRFQEAVADFTQAIKLEPNNSAAYTNRALALRQM- 125

Query: 220 VPGDRERVEQSLKEFRNFVDTHSNVVEACTLFAQVLVDQEDFDGAEEYFNRSIRVDPENA 279
                    QS                               D A   F+R+I V+P++A
Sbjct: 126 --------GQS-------------------------------DAARADFDRAIEVNPKHA 146

Query: 280 SLYVHRAMLMLQARGNVDEAIKLIEKAISIDKSCMFAYETLGTIEVQRGRLEEAVKCFNK 339
             YV RA L L+A+GN+D+A+  +++AI ++     A+   G I  +RG    AV  F+ 
Sbjct: 147 PAYVGRANL-LRAQGNLDQALADLDQAIRLNPESAQAFHARGLIHQKRGDDARAVTDFDN 205

Query: 340 AL 341
           A+
Sbjct: 206 AI 207



 Score = 56.2 bits (134), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 58/227 (25%), Positives = 100/227 (44%), Gaps = 12/227 (5%)

Query: 94  NHTKALARLLRATVYIFTSQSTKAIEDLTQLVEDTSVDPKIKVNAHIKRAVVHLHAASDF 153
           N + A A   R   Y    +  +A+ D TQ ++   ++P     A+  RA+  L      
Sbjct: 74  NPSSAEAYDTRGVAYARVGRFQEAVADFTQAIK---LEPNNSA-AYTNRALA-LRQMGQS 128

Query: 154 TKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQRHF 213
             A AD D A +V+P  A +Y  R  +    G  ++AL +LD+ I LNP    A   R  
Sbjct: 129 DAARADFDRAIEVNPKHAPAYVGRANLLRAQGNLDQALADLDQAIRLNPESAQAFHARGL 188

Query: 214 VVHKMIVPGDRERVEQSLKEFRNFVDTHSNVVEACTLFAQVLVDQEDFDGAEEYFNRSIR 273
           +  K    GD  R   ++ +F N +D             + LV    +D A E FN ++ 
Sbjct: 189 IHQKR---GDDAR---AVTDFDNAIDRDPFAAAPYLARGESLVTLGKYDKAVEDFNAALN 242

Query: 274 VDPENASLYVHRAMLMLQARGNVDEAIKLIEKAISIDKSCMFAYETL 320
           VD ++A  +    +   ++ GN  +A +  ++A+++D     A + +
Sbjct: 243 VDSKSALAWAWLGVAYDKS-GNRSKARESFQRALTLDPQQPLAKQGM 288


>gi|330509140|ref|YP_004385568.1| TPR-repeat-containing protein [Methanosaeta concilii GP6]
 gi|328929948|gb|AEB69750.1| TPR-repeat protein [Methanosaeta concilii GP6]
          Length = 293

 Score = 65.5 bits (158), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 59/241 (24%), Positives = 111/241 (46%), Gaps = 18/241 (7%)

Query: 170 VADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQRHFVVHKMIVPGDRERVEQ 229
           +A+ +Y++GQ     G YEEA++  DK I LNP            + K I+    E+  +
Sbjct: 46  IAEDWYKKGQELERKGSYEEAVKAYDKAIELNPK------DIMVWLSKGIILSGLEQHNE 99

Query: 230 SLKEFRNFVDTHSNVVEACTLFAQVLVDQEDFDGAEEYFNRSIRVDPENASLYVHRAMLM 289
           S++ +   ++     ++A    A  L     ++ +   +NR +++DP  A  +V +  + 
Sbjct: 100 SIEAYETAIEIDPKSIQAWGTMADELYHLGRYNESLNAYNRVLQMDPHMARAWVEKGDI- 158

Query: 290 LQARGNVDEAIKLIEKAISI-------DKSCMFAYETLGTIEVQRGRLEEAVKCFNKALP 342
           L   G  +EAIK   KA+ I       +   + A++  G    + GR EEA+K ++K + 
Sbjct: 159 LNKTGRHEEAIKAFNKALEIYDNTIQENPEDIIAWQGKGITLEKMGRYEEAIKSYDKVIE 218

Query: 343 LARDEAELSHIYSLRDAAIAQMKVCER---YNIKKKVSPRSQNITKNEK-LAIKQLRENN 398
           ++  +  L    +  D   A  K  E    YN   +++P+  +     K LA++ L  N+
Sbjct: 219 MSSPDYALGAWTAKGDIFKAIGKYEESIKAYNKVIEIAPKEASYAWEGKGLALEALGRNS 278

Query: 399 D 399
           +
Sbjct: 279 E 279



 Score = 45.4 bits (106), Expect = 0.086,   Method: Compositional matrix adjust.
 Identities = 46/211 (21%), Positives = 93/211 (44%), Gaps = 22/211 (10%)

Query: 99  LARLLRATVYIFTSQSTKAIEDLTQLVEDTSVDPK-IKVNAHIKRAVVHLHAASDFTKAF 157
           +  L +  +     Q  ++IE     +E   +DPK I+    +   + HL   ++   A+
Sbjct: 82  MVWLSKGIILSGLEQHNESIEAYETAIE---IDPKSIQAWGTMADELYHLGRYNESLNAY 138

Query: 158 ADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDK-------TIALNPNFHVARAQ 210
              +   ++DP++A ++ ++G I    G++EEA++  +K       TI  NP   +A   
Sbjct: 139 ---NRVLQMDPHMARAWVEKGDILNKTGRHEEAIKAFNKALEIYDNTIQENPEDIIAWQG 195

Query: 211 RHFVVHKMIVPGDRERVEQSLKEFRNFVDTHSN--VVEACTLFAQVLVDQEDFDGAEEYF 268
           +   + KM       R E+++K +   ++  S    + A T    +      ++ + + +
Sbjct: 196 KGITLEKM------GRYEEAIKSYDKVIEMSSPDYALGAWTAKGDIFKAIGKYEESIKAY 249

Query: 269 NRSIRVDPENASLYVHRAMLMLQARGNVDEA 299
           N+ I + P+ AS       L L+A G   EA
Sbjct: 250 NKVIEIAPKEASYAWEGKGLALEALGRNSEA 280


>gi|300865047|ref|ZP_07109874.1| putative Calcium/calmodulin-dependent protein kinase [Oscillatoria
            sp. PCC 6506]
 gi|300336984|emb|CBN55024.1| putative Calcium/calmodulin-dependent protein kinase [Oscillatoria
            sp. PCC 6506]
          Length = 1081

 Score = 65.5 bits (158), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 41/193 (21%), Positives = 94/193 (48%), Gaps = 6/193 (3%)

Query: 154  TKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQRHF 213
            T+A A  D A ++  +   ++  +G       ++++AL   DK + + P +++    R  
Sbjct: 877  TEALAAYDNAIQIKSDFYPAWIGKGSTLFFMQRFQDALNAYDKAVEIRPKYYLPWHNRGS 936

Query: 214  VVHKMIVPGDRERVEQSLKEFRNFVDTHSNVVEACTLFAQVLVDQEDFDGAEEYFNRSIR 273
            V+   +     +R E +L  ++  +D + N   A     + L+  + ++ A   F+++++
Sbjct: 937  VLSDGL-----QRYENALASYQKAIDLNPNFFPALRDQGKALMQLQKYEDAIAAFDKALK 991

Query: 274  VDPENASLYVHRAMLMLQARGNVDEAIKLIEKAISIDKSCMFAYETLGTIEVQRGRLEEA 333
            ++P +   +  R + + + +   DEA+   +KAI+I+ +   A+        Q GR E+A
Sbjct: 992  INPNDYPSWGSRGIALTKLQ-RYDEALAAFDKAIAINSNDPLAWANRAWALEQWGRSEDA 1050

Query: 334  VKCFNKALPLARD 346
            +  +NKA+ +  D
Sbjct: 1051 IAAYNKAIEIKPD 1063



 Score = 52.0 bits (123), Expect = 9e-04,   Method: Compositional matrix adjust.
 Identities = 83/379 (21%), Positives = 151/379 (39%), Gaps = 60/379 (15%)

Query: 161  DEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQRHFVVHKMIV 220
            D A  + PN  ++   +G       +YE AL   DK +   P+F+ A   +  V++K+  
Sbjct: 707  DRAIAIKPNDPEALKDQGDALSSLERYEAALVTYDKALQYKPDFYQAWNTKGQVLYKL-- 764

Query: 221  PGDRERVEQSLKEFRNFVDTHSNVVEACTLFAQVLVDQEDFDGAEEYFNRSIRVDPENAS 280
                +R  ++L+     +       +        ++    +D A   F+++I  +P+++ 
Sbjct: 765  ----QRYNEALEAHEKAIAIAPTDAKGLNGRGVAMIGLGKYDDALVAFDKAIATNPDDSQ 820

Query: 281  LYVHRAMLM--LQ----ARGNVDEAIKLIEKAISIDKSCMFAYETLGTIEVQRGRLEEAV 334
             + ++ + +  LQ    A G   EAI L++  +      + A+   G +  +  R  EA+
Sbjct: 821  AWENKGLALEYLQRTQDAGGAYKEAIALLDNQLKQKPENVKAWVDKGRVLGKLQRHTEAL 880

Query: 335  KCFNKALPLARD--------EAELSHIYSLRDAAIAQMKVCERYNIKKKVSPRSQNITKN 386
              ++ A+ +  D         + L  +   +DA  A  K  E   I+ K      N  + 
Sbjct: 881  AAYDNAIQIKSDFYPAWIGKGSTLFFMQRFQDALNAYDKAVE---IRPKYYLPWHN--RG 935

Query: 387  EKLAIKQLRENNDIIIRPADKGGKTVVMDKADYTQKMTSILNSNDYEIIPGDPTKTIEES 446
              L+    R  N +                A Y + +   LN N +  +  D  K + + 
Sbjct: 936  SVLSDGLQRYENAL----------------ASYQKAID--LNPNFFPALR-DQGKALMQL 976

Query: 447  EKYGNLENESGQKHAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNL 506
            +KY              D   AF   D+A K++PN   S+  RG       +Y+EAL   
Sbjct: 977  QKY-------------EDAIAAF---DKALKINPNDYPSWGSRGIALTKLQRYDEALAAF 1020

Query: 507  DKTIALNPNFHVARAQRHF 525
            DK IA+N N  +A A R +
Sbjct: 1021 DKAIAINSNDPLAWANRAW 1039



 Score = 47.8 bits (112), Expect = 0.015,   Method: Compositional matrix adjust.
 Identities = 77/354 (21%), Positives = 145/354 (40%), Gaps = 54/354 (15%)

Query: 186  QYEEALRNLDKTIALNPNFHVARAQRHFVVHKMIVPGDRERVEQSLKEFRNFVDTHSNVV 245
            Q EEA++  D+ IA+ PN   A   +   +  +      ER E +L  +   +    +  
Sbjct: 698  QGEEAVQACDRAIAIKPNDPEALKDQGDALSSL------ERYEAALVTYDKALQYKPDFY 751

Query: 246  EACTLFAQVLVDQEDFDGAEEYFNRSIRVDPENASLYVHRAMLMLQARGNVDEAIKLIEK 305
            +A     QVL   + ++ A E   ++I + P +A     R + M+   G  D+A+   +K
Sbjct: 752  QAWNTKGQVLYKLQRYNEALEAHEKAIAIAPTDAKGLNGRGVAMI-GLGKYDDALVAFDK 810

Query: 306  AISIDKSCMFAYETLGTIEVQRGRLEEAVKCFNKALPLARDEAELSHIYSLRDAAIAQMK 365
            AI+ +     A+E  G       R ++A   + +A+ L  ++ +             + +
Sbjct: 811  AIATNPDDSQAWENKGLALEYLQRTQDAGGAYKEAIALLDNQLK------------QKPE 858

Query: 366  VCERYNIKKKVSPRSQNITKNEKLAIKQLRENNDIIIR----PADKGGKTVVMDKADYTQ 421
              + +  K +V  + Q  T  E LA      +N I I+    PA  G  + +     + Q
Sbjct: 859  NVKAWVDKGRVLGKLQRHT--EALAAY----DNAIQIKSDFYPAWIGKGSTLF----FMQ 908

Query: 422  KMTSILNSNDYEIIPGDPTKTIEESEKY-------GNLENESGQKHAASDFTKAFADLDE 474
            +    LN+ D         K +E   KY       G++ ++  Q+     +  A A   +
Sbjct: 909  RFQDALNAYD---------KAVEIRPKYYLPWHNRGSVLSDGLQR-----YENALASYQK 954

Query: 475  AEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQRHFVWT 528
            A  ++PN   +   +G+      +YE+A+   DK + +NPN + +   R    T
Sbjct: 955  AIDLNPNFFPALRDQGKALMQLQKYEDAIAAFDKALKINPNDYPSWGSRGIALT 1008



 Score = 43.1 bits (100), Expect = 0.41,   Method: Compositional matrix adjust.
 Identities = 41/190 (21%), Positives = 78/190 (41%), Gaps = 10/190 (5%)

Query: 100  ARLLRATVYIFTSQSTKAIEDLTQLVEDTSVDPKIKVNAHIKRAVVHLHAASDFTKAFAD 159
            A + + +   F  +   A+    + VE   + PK  +  H  R  V       +  A A 
Sbjct: 896  AWIGKGSTLFFMQRFQDALNAYDKAVE---IRPKYYLPWH-NRGSVLSDGLQRYENALAS 951

Query: 160  LDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQRHFVVHKMI 219
              +A  ++PN   +   +G+      +YE+A+   DK + +NPN + +   R   + K+ 
Sbjct: 952  YQKAIDLNPNFFPALRDQGKALMQLQKYEDAIAAFDKALKINPNDYPSWGSRGIALTKL- 1010

Query: 220  VPGDRERVEQSLKEFRNFVDTHSNVVEACTLFAQVLVDQEDFDGAEEYFNRSIRVDPENA 279
                 +R +++L  F   +  +SN   A    A  L      + A   +N++I + P+  
Sbjct: 1011 -----QRYDEALAAFDKAIAINSNDPLAWANRAWALEQWGRSEDAIAAYNKAIEIKPDFQ 1065

Query: 280  SLYVHRAMLM 289
                 R ML+
Sbjct: 1066 PAIEARKMLL 1075



 Score = 40.4 bits (93), Expect = 2.7,   Method: Compositional matrix adjust.
 Identities = 45/232 (19%), Positives = 86/232 (37%), Gaps = 35/232 (15%)

Query: 147 LHAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHV 206
           L+    + +A    ++A  + P  A     RG      G+Y++AL   DK IA NP+   
Sbjct: 761 LYKLQRYNEALEAHEKAIAIAPTDAKGLNGRGVAMIGLGKYDDALVAFDKAIATNPDDSQ 820

Query: 207 ARAQRHFV-----------------------------------VHKMIVPGDRERVEQSL 231
           A   +                                      V K  V G  +R  ++L
Sbjct: 821 AWENKGLALEYLQRTQDAGGAYKEAIALLDNQLKQKPENVKAWVDKGRVLGKLQRHTEAL 880

Query: 232 KEFRNFVDTHSNVVEACTLFAQVLVDQEDFDGAEEYFNRSIRVDPENASLYVHRAMLMLQ 291
             + N +   S+   A       L   + F  A   +++++ + P+    + +R  ++  
Sbjct: 881 AAYDNAIQIKSDFYPAWIGKGSTLFFMQRFQDALNAYDKAVEIRPKYYLPWHNRGSVLSD 940

Query: 292 ARGNVDEAIKLIEKAISIDKSCMFAYETLGTIEVQRGRLEEAVKCFNKALPL 343
                + A+   +KAI ++ +   A    G   +Q  + E+A+  F+KAL +
Sbjct: 941 GLQRYENALASYQKAIDLNPNFFPALRDQGKALMQLQKYEDAIAAFDKALKI 992


>gi|218247323|ref|YP_002372694.1| hypothetical protein PCC8801_2530 [Cyanothece sp. PCC 8801]
 gi|218167801|gb|ACK66538.1| TPR repeat-containing protein [Cyanothece sp. PCC 8801]
          Length = 260

 Score = 65.5 bits (158), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 49/204 (24%), Positives = 92/204 (45%), Gaps = 7/204 (3%)

Query: 149 AASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVAR 208
            A ++  A AD  +A ++ P   DSYY RG  Y + G+ ++AL + +  I LNP F  A 
Sbjct: 46  GAGNYQGAIADFTQAIQLAPQDPDSYYNRGYAYHIIGKIDQALADYNLAIQLNPQFAYAY 105

Query: 209 AQRHFVVHKMIVPGDRERVEQSLKEFRNFVDTHSNVVEACTLFAQVLVDQEDFDGAEEYF 268
             R +  ++M      +  +++L +    +  + N  +          D  +   A   +
Sbjct: 106 GNRCYAFYQM------KDYQKALSDCSEAIKLNPNYADFYIYRGNAQDDLGNHQAAIADY 159

Query: 269 NRSIRVDPENASLYVHRAMLMLQARGNVDEAIKLIEKAISIDKSCMFAYETLGTIEVQRG 328
             +IR++   A  Y +RA+   +A+  + EAI    K++ +D +   AY   G  + + G
Sbjct: 160 TEAIRLNSNYAKAYYNRALAYNRAQL-LPEAIADYTKSVQLDPNFADAYYNRGITQFKLG 218

Query: 329 RLEEAVKCFNKALPLARDEAELSH 352
              EA+    KA  L + +   ++
Sbjct: 219 NESEAIADLQKASQLFKTQGNTTY 242



 Score = 49.7 bits (117), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 28/86 (32%), Positives = 42/86 (48%)

Query: 454 NESGQKHAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALN 513
           N+   K  A ++  A AD  +A ++ P   DSYY RG  Y + G+ ++AL + +  I LN
Sbjct: 39  NQGVDKIGAGNYQGAIADFTQAIQLAPQDPDSYYNRGYAYHIIGKIDQALADYNLAIQLN 98

Query: 514 PNFHVARAQRHFVWTSTLAELMAFSD 539
           P F  A   R + +        A SD
Sbjct: 99  PQFAYAYGNRCYAFYQMKDYQKALSD 124



 Score = 40.4 bits (93), Expect = 2.2,   Method: Compositional matrix adjust.
 Identities = 22/65 (33%), Positives = 33/65 (50%)

Query: 464 DFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQR 523
           D+ KA +D  EA K++PN AD Y  RG      G ++ A+ +  + I LN N+  A   R
Sbjct: 117 DYQKALSDCSEAIKLNPNYADFYIYRGNAQDDLGNHQAAIADYTEAIRLNSNYAKAYYNR 176

Query: 524 HFVWT 528
              + 
Sbjct: 177 ALAYN 181



 Score = 40.4 bits (93), Expect = 2.7,   Method: Compositional matrix adjust.
 Identities = 62/243 (25%), Positives = 101/243 (41%), Gaps = 34/243 (13%)

Query: 270 RSIRVDPENASLYVHRAMLMLQARGNVDEAIKLIEKAISIDKSCMFAYETLGTIEVQRGR 329
           +S    P NA  + ++ +  + A GN   AI    +AI +      +Y   G      G+
Sbjct: 25  QSTNNSPSNAVGWYNQGVDKIGA-GNYQGAIADFTQAIQLAPQDPDSYYNRGYAYHIIGK 83

Query: 330 LEEAVKCFNKALPLARDEAELSHIYSLRDAAIAQMKVCERYNIKKKVSPRSQNITKNEKL 389
           +++A+  +N A+ L     + ++ Y  R  A  QMK     + +K +S  S+ I  N   
Sbjct: 84  IDQALADYNLAIQL---NPQFAYAYGNRCYAFYQMK-----DYQKALSDCSEAIKLNPNY 135

Query: 390 AIKQLRENNDIIIRPADKGGKTVVMDKADYTQKMTSILNSNDYEIIPGDPTKTIEESEKY 449
           A   +   N       D G     +  ADYT+ +   LNSN               ++ Y
Sbjct: 136 ADFYIYRGN----AQDDLGNHQAAI--ADYTEAIR--LNSN--------------YAKAY 173

Query: 450 GNLENESGQKHAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKT 509
               N +   + A    +A AD  ++ ++DPN AD+YY RG      G   EA+ +L K 
Sbjct: 174 ---YNRALAYNRAQLLPEAIADYTKSVQLDPNFADAYYNRGITQFKLGNESEAIADLQKA 230

Query: 510 IAL 512
             L
Sbjct: 231 SQL 233


>gi|427706150|ref|YP_007048527.1| hypothetical protein Nos7107_0709 [Nostoc sp. PCC 7107]
 gi|427358655|gb|AFY41377.1| Tetratricopeptide TPR_1 repeat-containing protein [Nostoc sp. PCC
           7107]
          Length = 597

 Score = 65.5 bits (158), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 81/375 (21%), Positives = 162/375 (43%), Gaps = 25/375 (6%)

Query: 153 FTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQRH 212
           + +A A  ++   + P+  + +  R  I     +Y EAL + D+T+ L P + +A AQR 
Sbjct: 75  YDEAIAACNQGIAIKPDEIEIWVTRTAILLKQVKYSEALVSADRTLRLQPKYSLALAQRC 134

Query: 213 FVVHKMIVPGDR-ERVEQSLKEFRNFVDTHSNVVEACTLFAQVLVDQEDFDGAEEYFNRS 271
             +  +    +     + +L+   N+  T + V        +  + Q   D A   F+R+
Sbjct: 135 EALLSLNKYAEAIAACDLALRSDGNWGSTTAVVAWYNRGLGESKLGQ--LDAAIASFSRA 192

Query: 272 IRVDPENASLYVHRAMLMLQARGNVD---EAIKLIEKAISI-----DKSCMFAYETLGTI 323
           + + PEN+   V       QA  N++   EAI   + AI +     D +   A+ T G  
Sbjct: 193 LEITPENSLALVGNC----QALANLNRLSEAIAACDSAIKVNQNWGDTTPAIAWYTKGLA 248

Query: 324 EVQRGRLEEAVKCFNKALPLARDEAE--LSHIYSLRDAAIAQM-KVCERYNIKKKVSPRS 380
           + + G+LEEA+  F++A+ +   +A+  L H  SL  AAI +  +    Y    K+SP  
Sbjct: 249 QKKNGQLEEAIASFDQAVAMNPKDADIWLEHGRSL--AAIGKPEQAVVSYQFAIKLSPNY 306

Query: 381 QNITKNEKLAIKQLRE-NNDIIIRPADKGGKTVVMDKAD---YTQKMTSILNSNDYEIIP 436
             +  ++  ++ ++ + +           G +   D +    + Q+  ++    +YE   
Sbjct: 307 ALVLASQSASLNKIGKFSEAQAAAELALQGDSRWGDISPALAWEQRGIALAGLGNYEEGL 366

Query: 437 GDPTKTIEESEKYGN-LENESGQKHAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCL 495
               + I  +  Y     N +  +     +T A A  D A +++P  A +++ +G+I   
Sbjct: 367 ASIERAIALNPNYAEAWNNRAATQWYLGRYTDAIASSDRATEINPKYAQAWFNKGRILKT 426

Query: 496 FGQYEEALRNLDKTI 510
             +Y  +L   +K +
Sbjct: 427 LDRYSASLTAYNKAL 441



 Score = 49.7 bits (117), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 40/206 (19%), Positives = 92/206 (44%), Gaps = 35/206 (16%)

Query: 145 VHLHAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNF 204
           + L    ++ +  A ++ A  ++PN A+++  R       G+Y +A+ + D+   +NP +
Sbjct: 354 IALAGLGNYEEGLASIERAIALNPNYAEAWNNRAATQWYLGRYTDAIASSDRATEINPKY 413

Query: 205 HVARAQRHFVVHKMIVPGDRERVEQSLKEFRNFVDTHSNVVEACTLFAQVLVDQEDFDGA 264
               AQ  F         ++ R+ ++L  +   +  ++  +E    FA            
Sbjct: 414 ----AQAWF---------NKGRILKTLDRYSASLTAYNKALENVGKFA------------ 448

Query: 265 EEYFNRSIRVDPENASLYVHRAMLMLQARGNVDEAIKLIEKAISIDKSCMFAYETLGTIE 324
               ++S+      A+++ +R++++     N  EA+  ++KAI I+ +    +   G + 
Sbjct: 449 ----DKSLL-----ANIWANRSVVLWHLSRN-QEALVSVDKAIGINPNLSQGWYNRGIVL 498

Query: 325 VQRGRLEEAVKCFNKALPLARDEAEL 350
               R +EA+  +N+A  LA  +A +
Sbjct: 499 FNLARYDEAINAYNQASTLAPMDANI 524


>gi|411119538|ref|ZP_11391918.1| TPR repeat-containing protein [Oscillatoriales cyanobacterium
           JSC-12]
 gi|410711401|gb|EKQ68908.1| TPR repeat-containing protein [Oscillatoriales cyanobacterium
           JSC-12]
          Length = 2384

 Score = 65.5 bits (158), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 87/394 (22%), Positives = 157/394 (39%), Gaps = 37/394 (9%)

Query: 138 AHIKRAVVHLHAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKT 197
           AH    +V L A   +T+A     +A  + PN  +     G      G+ EEA+    + 
Sbjct: 73  AHNSMGIV-LRAQGKYTEAVEHYQQALALKPNQPEVLSNLGNALKELGKLEEAIAAYQQ- 130

Query: 198 IALNPNFHVARAQRHF-VVHKMIVPGDRERVEQSLKEFRNFVDTHSNVVEACTLFAQVLV 256
            ALN N   A A  +  + +K     D+ +++++L  +R  +    N  EA      VL 
Sbjct: 131 -ALNLNQAYAEAHNNLGIAYK-----DQGKLDEALACYREAIRLKPNYAEAHHNMGIVLR 184

Query: 257 DQEDFDGAEEYFNRSIRVDPENASLYVHRAMLMLQARGNVDEAIKLIEKAISIDKSCMFA 316
            Q   D A  YF ++I + P     Y       LQ +GN +EAI   ++ +++  +    
Sbjct: 185 QQNKLDDAIHYFRQAIALKPHYIDAYTSLGS-TLQQQGNGEEAIACYQQVVTLKPNYAEG 243

Query: 317 YETLGTIEVQRGRLEEAVKCFNKALPLARD-EAELSHIYSLR------DAAIA--QMKVC 367
           +  LG     +G+LEEA+  F +AL L  +     +++ +L       D AIA  Q  + 
Sbjct: 244 FNNLGLALQHQGKLEEAIATFQQALALQPNFPGVCNNLGNLLLEVNRVDEAIASYQQAIA 303

Query: 368 ERYNIKKKVSPRSQNITKNEKLAIKQLRENNDIIIRP----ADKGGKTVVMDKADYTQKM 423
           +  N  + ++     + +  KL          + +RP    A      V+ D+      +
Sbjct: 304 QHPNYPEALNNLGNALQRQGKLDEAITHYQKALELRPNFVEALSNLGAVLKDQHKLEAAV 363

Query: 424 TSILNSNDYEIIPGDPTKTIEESEKYGNLENESGQKHAASD-FTKAFADLDEAEKVDPNV 482
           + +              + +     Y  + N  G  +       +A A    A  + P +
Sbjct: 364 SYL-------------EQAVSLGPSYAEIHNNLGNAYQEQKRVDEAIACYRTAVALKPEM 410

Query: 483 ADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNF 516
           A+ +   G +    G++EEA  +  K I + P+F
Sbjct: 411 AEVHSNLGNMLQYIGEFEEAFEHFRKAIEIQPDF 444



 Score = 57.0 bits (136), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 42/179 (23%), Positives = 86/179 (48%), Gaps = 7/179 (3%)

Query: 171 ADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQRHFVVHKMIVPGDRERVEQS 230
           A+++   G +    G+Y EA+ +  + +AL PN      Q   + +      +  ++E++
Sbjct: 71  AEAHNSMGIVLRAQGKYTEAVEHYQQALALKPN------QPEVLSNLGNALKELGKLEEA 124

Query: 231 LKEFRNFVDTHSNVVEACTLFAQVLVDQEDFDGAEEYFNRSIRVDPENASLYVHRAMLML 290
           +  ++  ++ +    EA         DQ   D A   +  +IR+ P  A  + H   ++L
Sbjct: 125 IAAYQQALNLNQAYAEAHNNLGIAYKDQGKLDEALACYREAIRLKPNYAEAH-HNMGIVL 183

Query: 291 QARGNVDEAIKLIEKAISIDKSCMFAYETLGTIEVQRGRLEEAVKCFNKALPLARDEAE 349
           + +  +D+AI    +AI++    + AY +LG+   Q+G  EEA+ C+ + + L  + AE
Sbjct: 184 RQQNKLDDAIHYFRQAIALKPHYIDAYTSLGSTLQQQGNGEEAIACYQQVVTLKPNYAE 242



 Score = 56.2 bits (134), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 65/282 (23%), Positives = 119/282 (42%), Gaps = 45/282 (15%)

Query: 239 DTHSNVVEACTLFAQVLVDQEDFDGAEEYFNRSIRVDPENASLYVHRAM-LMLQARGNVD 297
           D HS  V+A  L   ++ + + F+ A+EYF R + + P   +   H +M ++L+A+G   
Sbjct: 34  DPHS--VDALNLLGALVYEDKRFEEAQEYFERVLSLQPGAEA---HNSMGIVLRAQGKYT 88

Query: 298 EAIKLIEKAISIDKSCMFAYETLGTIEVQRGRLEEAVKCFNKALPLARDEAELSHIYSLR 357
           EA++  ++A+++  +       LG    + G+LEEA+  + +AL L +  AE  +   + 
Sbjct: 89  EAVEHYQQALALKPNQPEVLSNLGNALKELGKLEEAIAAYQQALNLNQAYAEAHNNLGIA 148

Query: 358 ---DAAIAQMKVCERYNIKKKVSPRSQNITKNEKLAIKQLRENNDIIIRPADKGGKTVVM 414
                 + +   C R  I+ K  P       N  + ++Q  + +D I        +  + 
Sbjct: 149 YKDQGKLDEALACYREAIRLK--PNYAEAHHNMGIVLRQQNKLDDAI-----HYFRQAIA 201

Query: 415 DKADYTQKMTSILNSNDYEIIPGDPTKTIEESEKYGNLENESGQKHAASDFTKAFADLDE 474
            K  Y    TS+               T+++    GN E             +A A   +
Sbjct: 202 LKPHYIDAYTSL-------------GSTLQQQ---GNGE-------------EAIACYQQ 232

Query: 475 AEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNF 516
              + PN A+ +   G      G+ EEA+    + +AL PNF
Sbjct: 233 VVTLKPNYAEGFNNLGLALQHQGKLEEAIATFQQALALQPNF 274



 Score = 53.5 bits (127), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 61/294 (20%), Positives = 115/294 (39%), Gaps = 49/294 (16%)

Query: 155 KAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQRHFV 214
           +A A   +A  + PN        G +     + +EA+ +  + IA +PN+  A       
Sbjct: 259 EAIATFQQALALQPNFPGVCNNLGNLLLEVNRVDEAIASYQQAIAQHPNYPEALNNLGNA 318

Query: 215 VHKMIVPGDRERVEQSLKEFRNFVDTHSNVVEACTLFAQVLVDQEDFDGAEEYFNRSIRV 274
           + +      + ++++++  ++  ++   N VEA +    VL DQ   + A  Y  +++ +
Sbjct: 319 LQR------QGKLDEAITHYQKALELRPNFVEALSNLGAVLKDQHKLEAAVSYLEQAVSL 372

Query: 275 DPENASLY--------------------------------VHRAML-MLQARGNVDEAIK 301
            P  A ++                                VH  +  MLQ  G  +EA +
Sbjct: 373 GPSYAEIHNNLGNAYQEQKRVDEAIACYRTAVALKPEMAEVHSNLGNMLQYIGEFEEAFE 432

Query: 302 LIEKAISIDKSCMFAYETLGTIEVQRGRLEEAVKCFNKALPLARDEAELSHIYSLRDAAI 361
              KAI I       Y  LG      G+++EA   ++KAL L  D  E     +L    +
Sbjct: 433 HFRKAIEIQPDFAGVYNNLGIAHRNAGQVQEAFAAYSKALELKPDFVEAHWNTALNHLLL 492

Query: 362 AQMKVC-ERYNIKKKVSPRSQNITKNEKLAIKQLRENNDIIIRPADKGGKTVVM 414
             +K   E Y  + +    S+ I +N   +  Q R +  ++       GKT+++
Sbjct: 493 GNLKQGFEGYEWRFQ---WSRFIEQNPSRSYSQPRWDGSLL------DGKTILL 537



 Score = 49.7 bits (117), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 51/228 (22%), Positives = 106/228 (46%), Gaps = 14/228 (6%)

Query: 115 TKAIEDLTQLVEDTSVDPKIKVNAHIKRAVVHLHAASDFTKAFADLDEAEKVDPNVADSY 174
           T+A+E   Q +      P++  N  +  A+  L       +A A   +A  ++   A+++
Sbjct: 88  TEAVEHYQQALALKPNQPEVLSN--LGNALKEL---GKLEEAIAAYQQALNLNQAYAEAH 142

Query: 175 YQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQRHFVVHKM-IVPGDRERVEQSLKE 233
              G  Y   G+ +EAL    + I L PN+    A+ H   H M IV   + +++ ++  
Sbjct: 143 NNLGIAYKDQGKLDEALACYREAIRLKPNY----AEAH---HNMGIVLRQQNKLDDAIHY 195

Query: 234 FRNFVDTHSNVVEACTLFAQVLVDQEDFDGAEEYFNRSIRVDPENASLYVHRAMLMLQAR 293
           FR  +    + ++A T     L  Q + + A   + + + + P  A  + +   L LQ +
Sbjct: 196 FRQAIALKPHYIDAYTSLGSTLQQQGNGEEAIACYQQVVTLKPNYAEGF-NNLGLALQHQ 254

Query: 294 GNVDEAIKLIEKAISIDKSCMFAYETLGTIEVQRGRLEEAVKCFNKAL 341
           G ++EAI   ++A+++  +       LG + ++  R++EA+  + +A+
Sbjct: 255 GKLEEAIATFQQALALQPNFPGVCNNLGNLLLEVNRVDEAIASYQQAI 302



 Score = 40.8 bits (94), Expect = 1.7,   Method: Compositional matrix adjust.
 Identities = 47/200 (23%), Positives = 79/200 (39%), Gaps = 41/200 (20%)

Query: 142  RAVVHLHAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALN 201
            RA + LH      +A    +   +  P+ AD ++       L G      R LD+ IA  
Sbjct: 879  RAAIRLHQTGQVEEARRRCEAFLQKCPDSADGWH-------LLGLIAHHDRKLDEAIAYY 931

Query: 202  PNFHVARAQRHFVVHKMIVPGDRERVEQSLKEFRNFVDTHSNVVEACTLFAQVLVDQEDF 261
             N                          +LK   N +DT++N+  A       L +Q   
Sbjct: 932  QN--------------------------TLKANDNHLDTYNNLAVA-------LHEQGKL 958

Query: 262  DGAEEYFNRSIRVDPENASLYVHRAMLMLQARGNVDEAIKLIEKAISIDKSCMFAYETLG 321
            D A  Y+ +++ + P+N   + + A L L+ R  +DEAI   ++AI+       AY  LG
Sbjct: 959  DEAMPYYQKALALKPDNPDAHNNYANL-LRERSRLDEAIYHYQQAIAARPDYPDAYNNLG 1017

Query: 322  TIEVQRGRLEEAVKCFNKAL 341
                 +G    A + + +A+
Sbjct: 1018 LAYYAKGNFASAAEAYRQAI 1037


>gi|72382930|ref|YP_292285.1| TPR repeat-containing protein [Prochlorococcus marinus str. NATL2A]
 gi|72002780|gb|AAZ58582.1| TPR repeat [Prochlorococcus marinus str. NATL2A]
          Length = 612

 Score = 65.5 bits (158), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 61/214 (28%), Positives = 97/214 (45%), Gaps = 16/214 (7%)

Query: 155 KAFADLDEAE-------KVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVA 207
           K+   L EAE       ++ P++ADSYY  G I    G+ +E+     K I LNPN+   
Sbjct: 103 KSLGKLKEAEISTRKAIEIKPDLADSYYNLGIILKDLGKLKESETYTRKAIELNPNY--- 159

Query: 208 RAQRHFVVHKMIVPGDRERVEQSLKEFRNFVDTHSNVVEACTLFAQVLVDQEDFDGAEEY 267
            A+ H ++   ++  D   ++++    R  ++   N  EAC+    +L D      AE  
Sbjct: 160 -AEAHSILG--LILRDLGNLQEAESYTRKAIEIKPNYAEACSNLGLILKDSGQLQEAELS 216

Query: 268 FNRSIRVDPENASLYVHRAMLMLQARGNVDEAIKLIEKAISIDKSCMFAYETLGTIEVQR 327
             ++I ++P  A  Y +   + L   G + EA     KAI+I  +   A   LG I    
Sbjct: 217 CRKAIEINPNFADAYSNLGGI-LSDLGKLKEAELSARKAIAIKPNYAEACSNLGIILKDL 275

Query: 328 GRLEEAVKCFNKALPLARDEAELSHIYSLRDAAI 361
           G L+EA     KA+ +  + AE   +YSL    I
Sbjct: 276 GNLQEAESYTRKAIEIKPNFAE--ALYSLGSLLI 307


>gi|397570028|gb|EJK47112.1| hypothetical protein THAOC_34193 [Thalassiosira oceanica]
          Length = 1009

 Score = 65.5 bits (158), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 65/238 (27%), Positives = 119/238 (50%), Gaps = 19/238 (7%)

Query: 140 IKRAVVHLHAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIA 199
           +KRA V +   S+  +A A  DEA K++P+ +D+   R  +  L  + +++  +L+  I 
Sbjct: 768 VKRAGVKMDG-SNHDEAEALFDEALKLNPSASDALLHRANLRMLQQRVDDSKDDLEMCIR 826

Query: 200 LNPNFHVARAQRHFV-VHKMIVPGDRERVEQSLKEFRNFVDTHSNVVEACTLFAQVLVDQ 258
           L PN  +AR +   V + K  + G +  ++Q+ +E+    D  S  +       ++   Q
Sbjct: 827 LYPNNLLARLRLATVYMAKQDMDGAKRMLDQA-EEY----DPESTEIHC--YRGEIKFTQ 879

Query: 259 EDFDGAEEYFNRSIRVDPENASLYVHRAMLMLQ---ARGNVDE---AIKLIEKAISIDKS 312
            D   A+ YF ++I  D  N + YV++++L++    A G + +   AI L+E AI  D  
Sbjct: 880 GDVQEAKSYFLKAIACDAYNPTPYVNQSLLIMNTPPAPGQMPDFATAISLLETAIEKDPM 939

Query: 313 CMFAYETLGTIEVQRG----RLEEAVKCFNKALPLARDEAELSHIYSLRDAAIAQMKV 366
              AY  LG +++       + +E V+ ++K L   R   EL  I S+R   +AQ++ 
Sbjct: 940 FHTAYVQLGQMKLSMATDLTKAKEVVELYDKGLTYCRTPEELLDICSMRILTVAQIEA 997


>gi|223937047|ref|ZP_03628955.1| Tetratricopeptide TPR_2 repeat protein [bacterium Ellin514]
 gi|223894328|gb|EEF60781.1| Tetratricopeptide TPR_2 repeat protein [bacterium Ellin514]
          Length = 340

 Score = 65.5 bits (158), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 60/251 (23%), Positives = 108/251 (43%), Gaps = 51/251 (20%)

Query: 116 KAIEDLTQLVEDTSVDPKIKVNAHIKRAVVHLHAASDFTKAFADLDEAEKVDPNVADSYY 175
           +A+++LT+ +E+   D      A+  RA V     +++ KA +D   A  ++P+   +Y+
Sbjct: 51  QAVKELTREIENNPKDEW----AYACRAYV-FSEMTNYDKALSDYTAAIALNPHNCTNYF 105

Query: 176 QRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQRHFVVHKMIVPGDRERVEQSLKEFR 235
           +R  +Y   G +   + + +K I  +P +  A   R  V                     
Sbjct: 106 RRAYVYLRKGDWTNEISDFNKCIQEDPEYFTAYVDRGLV--------------------- 144

Query: 236 NFVDTHSNVVEACTLFAQVLVDQEDFDGAEEYFNRSIRVDPENASLYVHRAMLMLQARGN 295
                                ++++FD A + FN ++R+ P +A +Y +RA +   AR N
Sbjct: 145 -------------------YAERKEFDHAMDDFNEALRLKPRSAMVYAYRAGI-YAARTN 184

Query: 296 VDEAIKLIEKAISIDKSCMFAYETLGTIEVQRGRLEEAVKCFNKALPLA-RDEAELSHIY 354
            D+A+K    A+ +       Y   G +    GR +EA+K F  AL    RDE   +++ 
Sbjct: 185 YDDALKDCNTAVKLSPRWSMPYNRRGALYSTMGRDDEALKDFRVALQFGKRDEESCNNLA 244

Query: 355 SL----RDAAI 361
            L    +DAAI
Sbjct: 245 WLLATSQDAAI 255



 Score = 55.8 bits (133), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 52/206 (25%), Positives = 91/206 (44%), Gaps = 17/206 (8%)

Query: 58  ESHELDLLSKAKRAF---EHEDYLTAIRHCTEEIESTSSNHTKALARLLRATVYIFTSQS 114
           E++  D  + A RA+   E  +Y  A+   T  I     N T    R   A VY+     
Sbjct: 61  ENNPKDEWAYACRAYVFSEMTNYDKALSDYTAAIALNPHNCTNYFRR---AYVYLRKGDW 117

Query: 115 TKAIEDLTQLVEDTSVDPKIKVNAHIKRAVVHLHAASDFTKAFADLDEAEKVDPNVADSY 174
           T  I D  + +++   DP+    A++ R +V+     +F  A  D +EA ++ P  A  Y
Sbjct: 118 TNEISDFNKCIQE---DPEY-FTAYVDRGLVYAER-KEFDHAMDDFNEALRLKPRSAMVY 172

Query: 175 YQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQRHFVVHKMIVPGDRERVEQSLKEF 234
             R  IY     Y++AL++ +  + L+P + +   +R  +   M       R +++LK+F
Sbjct: 173 AYRAGIYAARTNYDDALKDCNTAVKLSPRWSMPYNRRGALYSTM------GRDDEALKDF 226

Query: 235 RNFVDTHSNVVEACTLFAQVLVDQED 260
           R  +       E+C   A +L   +D
Sbjct: 227 RVALQFGKRDEESCNNLAWLLATSQD 252



 Score = 39.3 bits (90), Expect = 4.9,   Method: Compositional matrix adjust.
 Identities = 27/113 (23%), Positives = 53/113 (46%), Gaps = 1/113 (0%)

Query: 418 DYTQKMTSILNSNDYEIIPGDPTKTIEESEKYGNLENESGQKHAA-SDFTKAFADLDEAE 476
           +Y ++    L   D+     D  K I+E  +Y     + G  +A   +F  A  D +EA 
Sbjct: 103 NYFRRAYVYLRKGDWTNEISDFNKCIQEDPEYFTAYVDRGLVYAERKEFDHAMDDFNEAL 162

Query: 477 KVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQRHFVWTS 529
           ++ P  A  Y  R  IY     Y++AL++ +  + L+P + +   +R  ++++
Sbjct: 163 RLKPRSAMVYAYRAGIYAARTNYDDALKDCNTAVKLSPRWSMPYNRRGALYST 215


>gi|172035504|ref|YP_001802005.1| hypothetical protein cce_0588 [Cyanothece sp. ATCC 51142]
 gi|171696958|gb|ACB49939.1| unknown [Cyanothece sp. ATCC 51142]
          Length = 287

 Score = 65.5 bits (158), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 50/194 (25%), Positives = 87/194 (44%), Gaps = 7/194 (3%)

Query: 150 ASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARA 209
           A ++  A     E+ K+D   AD+YY RG  Y +  Q+EEA+ + +K I LN  F  A  
Sbjct: 75  AGNYQAAIEAFTESIKLDETDADAYYNRGYSYLVLEQFEEAINDYNKAIELNAEFAYAYG 134

Query: 210 QRHFVVHKMIVPGDRERVEQSLKEFRNFVDTHSNVVEACTLFAQVLVDQEDFDGAEEYFN 269
            R +  +++      +  EQS+K+    ++  +N  +          D +    A   +N
Sbjct: 135 NRCYAYYQL------KNYEQSIKDCSQAIELEANYADFYIYLGNAKDDLKMHQAAILAYN 188

Query: 270 RSIRVDPENASLYVHRAMLMLQARGNVDEAIKLIEKAISIDKSCMFAYETLGTIEVQRGR 329
           ++I ++  N   Y +RA L     G   +A++   KAI  + +   AY   G    +   
Sbjct: 189 QAIAINENNPKAYYNRA-LAYNRLGQSLQAVEDYTKAIQFNPNFADAYHNRGVTRFKLKE 247

Query: 330 LEEAVKCFNKALPL 343
           +E+A+    KA  L
Sbjct: 248 IEKAIADLEKAAEL 261



 Score = 46.6 bits (109), Expect = 0.033,   Method: Compositional matrix adjust.
 Identities = 23/66 (34%), Positives = 35/66 (53%)

Query: 462 ASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARA 521
           A ++  A     E+ K+D   AD+YY RG  Y +  Q+EEA+ + +K I LN  F  A  
Sbjct: 75  AGNYQAAIEAFTESIKLDETDADAYYNRGYSYLVLEQFEEAINDYNKAIELNAEFAYAYG 134

Query: 522 QRHFVW 527
            R + +
Sbjct: 135 NRCYAY 140


>gi|42527528|ref|NP_972626.1| TPR [Treponema denticola ATCC 35405]
 gi|449111465|ref|ZP_21748062.1| hypothetical protein HMPREF9735_01111 [Treponema denticola ATCC
           33521]
 gi|449113718|ref|ZP_21750202.1| hypothetical protein HMPREF9721_00720 [Treponema denticola ATCC
           35404]
 gi|41818113|gb|AAS12537.1| TPR domain protein [Treponema denticola ATCC 35405]
 gi|448958128|gb|EMB38865.1| hypothetical protein HMPREF9721_00720 [Treponema denticola ATCC
           35404]
 gi|448958492|gb|EMB39223.1| hypothetical protein HMPREF9735_01111 [Treponema denticola ATCC
           33521]
          Length = 369

 Score = 65.5 bits (158), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 58/254 (22%), Positives = 114/254 (44%), Gaps = 16/254 (6%)

Query: 102 LLRATVYIFTSQSTKAIEDLTQLVEDTSVDPKIKVNAHIKRAVVHLHAASDFTKAFADLD 161
           LLR  ++    +  +AI D ++++E    DP+    A+  R+  +L    DF KA  D++
Sbjct: 93  LLRGLIFYAMMKYNEAIVDFSRVIELIPNDPR----AYNNRSSCYLEFG-DFEKALCDIN 147

Query: 162 EAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQRHFVVHKMIVP 221
            A K+DP  +  +  RG+I+     Y+ A+ N  + + LNP    A   R  + ++ I  
Sbjct: 148 SAIKLDPKDSLHFKNRGEIFYRLKDYDNAILNYTQALKLNPRDSDAYFSRG-LFYETIKD 206

Query: 222 GDRERVE--QSLKEFRNFVDTHSNVVEACTLFAQVLVDQEDFDGAEEYFNRSIRVDPENA 279
            +    +  ++LK      D + ++  +C          +++D A   FN+ I+++  +A
Sbjct: 207 YNSALSDYYKALKLKYRSNDIYFHIGLSCYAL-------KEYDNAINAFNKYIKINNTDA 259

Query: 280 SLYVHRAMLMLQARGNVDEAIKLIEKAISIDKSCMFAYETLGTIEVQRGRLEEAVKCFNK 339
             Y  R  +    + N D +IK ++ AI++  S    +         +  L EA+ C  +
Sbjct: 260 EAYTWRGSIYFILK-NYDNSIKDLDMAINLGGSNEVVFYNKAVALYSKNELNEAIDCLEE 318

Query: 340 ALPLARDEAELSHI 353
            + L  D  +   +
Sbjct: 319 GINLFPDYYDFYQV 332



 Score = 45.1 bits (105), Expect = 0.100,   Method: Compositional matrix adjust.
 Identities = 32/116 (27%), Positives = 48/116 (41%), Gaps = 10/116 (8%)

Query: 433 EIIPGDPTKTIEESEKYGNLENESGQKHAASDFTKAFADLDEAEKVDPNVADSYYQRGQI 492
           E+IP DP              N S       DF KA  D++ A K+DP  +  +  RG+I
Sbjct: 117 ELIPNDPRAY----------NNRSSCYLEFGDFEKALCDINSAIKLDPKDSLHFKNRGEI 166

Query: 493 YCLFGQYEEALRNLDKTIALNPNFHVARAQRHFVWTSTLAELMAFSDEFMIPKITY 548
           +     Y+ A+ N  + + LNP    A   R   + +      A SD +   K+ Y
Sbjct: 167 FYRLKDYDNAILNYTQALKLNPRDSDAYFSRGLFYETIKDYNSALSDYYKALKLKY 222



 Score = 39.3 bits (90), Expect = 5.6,   Method: Compositional matrix adjust.
 Identities = 41/175 (23%), Positives = 84/175 (48%), Gaps = 14/175 (8%)

Query: 167 DPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQRHFVVHKMIVPGDRER 226
           DPN    YY RG  Y L G Y+ A+ ++++++ +NPN+  +   R  + + M+      +
Sbjct: 51  DPNNYKLYYVRGYYYSLSGYYDLAIHDINRSLKINPNYEESILLRGLIFYAMM------K 104

Query: 227 VEQSLKEFRNFVDTHSNVVEACTLFAQVLVDQEDFDGAEEYFNRSIRVDPENASLYVHRA 286
             +++ +F   ++   N   A    +   ++  DF+ A    N +I++DP+++  + +R 
Sbjct: 105 YNEAIVDFSRVIELIPNDPRAYNNRSSCYLEFGDFEKALCDINSAIKLDPKDSLHFKNRG 164

Query: 287 MLMLQARGNVDEAIKLIEKAISIDKSCMFAYETLGTIEVQRGRLEEAVKCFNKAL 341
            +  + + + D AI    +A+ ++     AY         RG   E +K +N AL
Sbjct: 165 EIFYRLK-DYDNAILNYTQALKLNPRDSDAY-------FSRGLFYETIKDYNSAL 211



 Score = 38.5 bits (88), Expect = 8.1,   Method: Compositional matrix adjust.
 Identities = 41/204 (20%), Positives = 80/204 (39%), Gaps = 27/204 (13%)

Query: 156 AFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQRHFVV 215
           A  D++ + K++PN  +S   RG I+    +Y EA+ +  + I L PN   A   R    
Sbjct: 74  AIHDINRSLKINPNYEESILLRGLIFYAMMKYNEAIVDFSRVIELIPNDPRAYNNR---- 129

Query: 216 HKMIVPGDRERVEQSLKEFRNFVDTHSNVVEACTL----------FAQVLVDQEDFDGAE 265
                            EF +F     ++  A  L            ++    +D+D A 
Sbjct: 130 ------------SSCYLEFGDFEKALCDINSAIKLDPKDSLHFKNRGEIFYRLKDYDNAI 177

Query: 266 EYFNRSIRVDPENASLYVHRAMLMLQARGNVDEAIKLIEKAISIDKSCMFAYETLGTIEV 325
             + ++++++P ++  Y  R  L  +   + + A+    KA+ +       Y  +G    
Sbjct: 178 LNYTQALKLNPRDSDAYFSRG-LFYETIKDYNSALSDYYKALKLKYRSNDIYFHIGLSCY 236

Query: 326 QRGRLEEAVKCFNKALPLARDEAE 349
                + A+  FNK + +   +AE
Sbjct: 237 ALKEYDNAINAFNKYIKINNTDAE 260


>gi|254585421|ref|XP_002498278.1| ZYRO0G06512p [Zygosaccharomyces rouxii]
 gi|238941172|emb|CAR29345.1| ZYRO0G06512p [Zygosaccharomyces rouxii]
          Length = 604

 Score = 65.5 bits (158), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 68/249 (27%), Positives = 119/249 (47%), Gaps = 21/249 (8%)

Query: 129 SVDPKIKVNAHIKRAVVHLHAASDFTKA---FADLDEAEKVDPNVADSYYQRGQIYCLFG 185
           ++D   +VN++I  A++     +D  KA   +   D+A K+DP  A  YY RGQ+Y +  
Sbjct: 343 AIDLHPRVNSYIYMALIM----ADKGKAEEYYEFFDKAIKLDPKNAAVYYHRGQMYFITA 398

Query: 186 QYEEALRNLDKTIALNPNFHVARAQRHFVVHKMIVPGDRERVEQSLKEFRNFVDTHSNVV 245
           QYE+A ++ DK   LN        Q   + ++     D E +    K  R F    +   
Sbjct: 399 QYEKAGQDFDKAKQLNEENIFPYIQLACLAYRENKFDDCETLFSEAK--RKF----ATAP 452

Query: 246 EACTLFAQVLVDQEDFDGAEEYFNRSIRVDPENASLYVHRAMLM----LQARG----NVD 297
           E    FA++L D+ D + A + ++ + R++     ++V  + L+    L AR     N  
Sbjct: 453 EVPNFFAEILADKGDLEKALKQYDIAKRLEEAVDGIHVGISPLVGKATLLARQPSVENFI 512

Query: 298 EAIKLIEKAISIDKSCMFAYETLGTIEVQRGRLEEAVKCFNKALPLARDEAELSHIYSLR 357
           EA KL+E+A + D         L  +++Q+  +++A+K F +A  LAR   E     +  
Sbjct: 513 EATKLLEEACAKDPRSEQGKVGLAQLKLQQEDIDDAIKLFEEAASLARTVDEKLQATTFA 572

Query: 358 DAAIAQMKV 366
           +AA  Q ++
Sbjct: 573 EAAKVQKRI 581



 Score = 42.4 bits (98), Expect = 0.61,   Method: Compositional matrix adjust.
 Identities = 20/42 (47%), Positives = 27/42 (64%)

Query: 472 LDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALN 513
            D+A K+DP  A  YY RGQ+Y +  QYE+A ++ DK   LN
Sbjct: 373 FDKAIKLDPKNAAVYYHRGQMYFITAQYEKAGQDFDKAKQLN 414


>gi|449116295|ref|ZP_21752746.1| hypothetical protein HMPREF9726_00731 [Treponema denticola H-22]
 gi|448954182|gb|EMB34965.1| hypothetical protein HMPREF9726_00731 [Treponema denticola H-22]
          Length = 369

 Score = 65.5 bits (158), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 58/254 (22%), Positives = 114/254 (44%), Gaps = 16/254 (6%)

Query: 102 LLRATVYIFTSQSTKAIEDLTQLVEDTSVDPKIKVNAHIKRAVVHLHAASDFTKAFADLD 161
           LLR  ++    +  +AI D ++++E    DP+    A+  R+  +L    DF KA  D++
Sbjct: 93  LLRGLIFYAMMKYNEAIVDFSRVIELIPNDPR----AYNNRSSCYLEFG-DFEKALCDIN 147

Query: 162 EAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQRHFVVHKMIVP 221
            A K+DP  +  +  RG+I+     Y+ A+ N  + + LNP    A   R  + ++ I  
Sbjct: 148 SAIKLDPKDSLHFKNRGEIFYRLKDYDNAILNYTQALKLNPRDSDAYFSRG-LFYETIKD 206

Query: 222 GDRERVE--QSLKEFRNFVDTHSNVVEACTLFAQVLVDQEDFDGAEEYFNRSIRVDPENA 279
            +    +  ++LK      D + ++  +C          +++D A   FN+ I+++  +A
Sbjct: 207 YNSALSDYYKALKLKYRSNDIYFHIGLSCYAL-------KEYDNAINAFNKYIKINNTDA 259

Query: 280 SLYVHRAMLMLQARGNVDEAIKLIEKAISIDKSCMFAYETLGTIEVQRGRLEEAVKCFNK 339
             Y  R  +    + N D +IK ++ AI++  S    +         +  L EA+ C  +
Sbjct: 260 EAYTWRGSIYFILK-NYDNSIKDLDMAINLGGSNEVVFYNKAVALYSKNELNEAIDCLEE 318

Query: 340 ALPLARDEAELSHI 353
            + L  D  +   +
Sbjct: 319 GINLFPDYYDFYQV 332



 Score = 45.1 bits (105), Expect = 0.10,   Method: Compositional matrix adjust.
 Identities = 32/116 (27%), Positives = 48/116 (41%), Gaps = 10/116 (8%)

Query: 433 EIIPGDPTKTIEESEKYGNLENESGQKHAASDFTKAFADLDEAEKVDPNVADSYYQRGQI 492
           E+IP DP              N S       DF KA  D++ A K+DP  +  +  RG+I
Sbjct: 117 ELIPNDPRA----------YNNRSSCYLEFGDFEKALCDINSAIKLDPKDSLHFKNRGEI 166

Query: 493 YCLFGQYEEALRNLDKTIALNPNFHVARAQRHFVWTSTLAELMAFSDEFMIPKITY 548
           +     Y+ A+ N  + + LNP    A   R   + +      A SD +   K+ Y
Sbjct: 167 FYRLKDYDNAILNYTQALKLNPRDSDAYFSRGLFYETIKDYNSALSDYYKALKLKY 222



 Score = 40.8 bits (94), Expect = 2.0,   Method: Compositional matrix adjust.
 Identities = 41/175 (23%), Positives = 85/175 (48%), Gaps = 14/175 (8%)

Query: 167 DPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQRHFVVHKMIVPGDRER 226
           DPN    YY+RG  Y L G Y+ A+ ++++++ +NPN+  +   R  + + M+      +
Sbjct: 51  DPNNYKLYYERGYYYSLSGYYDLAIHDINRSLKINPNYEESILLRGLIFYAMM------K 104

Query: 227 VEQSLKEFRNFVDTHSNVVEACTLFAQVLVDQEDFDGAEEYFNRSIRVDPENASLYVHRA 286
             +++ +F   ++   N   A    +   ++  DF+ A    N +I++DP+++  + +R 
Sbjct: 105 YNEAIVDFSRVIELIPNDPRAYNNRSSCYLEFGDFEKALCDINSAIKLDPKDSLHFKNRG 164

Query: 287 MLMLQARGNVDEAIKLIEKAISIDKSCMFAYETLGTIEVQRGRLEEAVKCFNKAL 341
            +  + + + D AI    +A+ ++     AY         RG   E +K +N AL
Sbjct: 165 EIFYRLK-DYDNAILNYTQALKLNPRDSDAY-------FSRGLFYETIKDYNSAL 211



 Score = 38.9 bits (89), Expect = 7.8,   Method: Compositional matrix adjust.
 Identities = 40/194 (20%), Positives = 82/194 (42%), Gaps = 7/194 (3%)

Query: 156 AFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQRHFVV 215
           A  D++ + K++PN  +S   RG I+    +Y EA+ +  + I L PN   A   R    
Sbjct: 74  AIHDINRSLKINPNYEESILLRGLIFYAMMKYNEAIVDFSRVIELIPNDPRAYNNRSSCY 133

Query: 216 HKMIVPGDRERVEQSLKEFRNFVDTHSNVVEACTLFAQVLVDQEDFDGAEEYFNRSIRVD 275
            +    GD    E++L +  + +              ++    +D+D A   + ++++++
Sbjct: 134 LEF---GD---FEKALCDINSAIKLDPKDSLHFKNRGEIFYRLKDYDNAILNYTQALKLN 187

Query: 276 PENASLYVHRAMLMLQARGNVDEAIKLIEKAISIDKSCMFAYETLGTIEVQRGRLEEAVK 335
           P ++  Y  R  L  +   + + A+    KA+ +       Y  +G         + A+ 
Sbjct: 188 PRDSDAYFSRG-LFYETIKDYNSALSDYYKALKLKYRSNDIYFHIGLSCYALKEYDNAIN 246

Query: 336 CFNKALPLARDEAE 349
            FNK + +   +AE
Sbjct: 247 AFNKYIKINNTDAE 260


>gi|188581172|ref|YP_001924617.1| hypothetical protein Mpop_1919 [Methylobacterium populi BJ001]
 gi|179344670|gb|ACB80082.1| Tetratricopeptide TPR_2 repeat protein [Methylobacterium populi
           BJ001]
          Length = 286

 Score = 65.5 bits (158), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 52/185 (28%), Positives = 81/185 (43%), Gaps = 7/185 (3%)

Query: 157 FADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQRHFVVH 216
            A L +    +P+ A +Y  RG  Y   GQ+ EA+ +  K I L+PN   A   R     
Sbjct: 54  IASLSDVISRNPSDAGAYVTRGAAYARSGQFGEAISDFSKAIQLDPNSASAYNNRALAYR 113

Query: 217 KMIVPGDRERVEQSLKEFRNFVDTHSNVVEACTLFAQVLVDQEDFDGAEEYFNRSIRVDP 276
           +        R + ++++F   + T  N   A    A +   Q D +GA    N +IR+ P
Sbjct: 114 QT------GRNDAAMQDFSKAIATDPNFSAAYIGRANLERAQGDLNGALNDLNVAIRLAP 167

Query: 277 ENASLYVHRAMLMLQARGNVDEAIKLIEKAISIDKSCMFAYETLGTIEVQRGRLEEAVKC 336
           E+A  Y H   L+ Q +G   EAI     AI  +      Y   G   +   + ++A++ 
Sbjct: 168 ESAEAY-HARGLVRQKQGQNPEAIGDFAAAIDRNPFVAAPYAARGQSLISLNQYDKAIED 226

Query: 337 FNKAL 341
           FN AL
Sbjct: 227 FNAAL 231



 Score = 42.7 bits (99), Expect = 0.44,   Method: Compositional matrix adjust.
 Identities = 20/55 (36%), Positives = 32/55 (58%)

Query: 465 FTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVA 519
           F +A +D  +A ++DPN A +Y  R   Y   G+ + A+++  K IA +PNF  A
Sbjct: 84  FGEAISDFSKAIQLDPNSASAYNNRALAYRQTGRNDAAMQDFSKAIATDPNFSAA 138


>gi|222823455|ref|YP_002575029.1| hypothetical protein Cla_0420 [Campylobacter lari RM2100]
 gi|222538677|gb|ACM63778.1| TPR-domain containing protein [Campylobacter lari RM2100]
          Length = 791

 Score = 65.5 bits (158), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 123/553 (22%), Positives = 222/553 (40%), Gaps = 109/553 (19%)

Query: 47  NGVELTNGDTNESHELDLLSKAKRAFEHEDYLTAIRHCTEEIESTSSNHTKALARLLRAT 106
           N V L N     + +LDLL +A  AF                ++ + ++   LA   RA 
Sbjct: 92  NNVFLFNLLGLCNFKLDLLQEALLAFN---------------KTIALDNAYYLAYFNRAR 136

Query: 107 VYIFTSQSTKAIEDL---------------TQLVEDTSVDPKIKVNAHIKRAVVHLHAAS 151
           VYI   + TKA++DL               T+ +   SVDPK  +    K   +   ++ 
Sbjct: 137 VYILLDEHTKALKDLQTCIDLAPEYYMAYYTRAITLLSVDPKQALIDFKKSQDLGFESSQ 196

Query: 152 -------------DFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTI 198
                        D+ KA     +  + D + AD+YY+R          E AL++  K+I
Sbjct: 197 IFYYQGVACENLEDYQKAIEFFTKMIEQDESFADAYYKRANNKRKVDDLEGALQDCLKSI 256

Query: 199 ALNPNFHVARAQRHFVVHKMIVPGDRERVEQSLKEFRNFVDTHSNVVEACTLFAQVLVDQ 258
            L+       A  + ++    +  D E++E S+  F+  ++   N+   C   A+VL D 
Sbjct: 257 ELDNE----NAMAYLILGH--IYKDLEKIELSIDAFKKSINLDENLQYPCFALARVLYDL 310

Query: 259 EDFDGAEEYFNRSIRVDPENASLYVHRAMLMLQARGNVDEAIKLIEKAIS---------- 308
           +D++ A +Y++++I +  E A  Y++R        GN    +K+IE+AI           
Sbjct: 311 KDYEQALKYYDKTIELYEEYAQAYINR--------GNTKINLKMIEEAIEDFDLAAKYYQ 362

Query: 309 ---------------IDKSCMFAYETLGTIEVQRGRLEEAVKCFNKALPLARDEAEL--- 350
                          ++ +  + +  LG    +  + +EA+  + KAL   ++  ++   
Sbjct: 363 ERARRHDFTPSELAELEHAVPYGFYHLGNSLYEIDKYDEALISYEKALKYQKEYPDVFFN 422

Query: 351 ---------SHIYSLRDAAIAQMKVCERYNIKKKVSPRSQNITKNEKLAIKQ--LRENND 399
                     +  +L D+ +A     ++ N +  V+  SQ      KL   Q  + E N+
Sbjct: 423 RAYLKSDLEKYDEALEDSELAVKYYKKQNNTQDYVNSFSQRAWIKSKLERFQEAMDEYNE 482

Query: 400 IIIRPADK-GGKTVVMDKADYTQKMTSILNSNDYEIIPGDPTKTIEESEKYGNLENESG- 457
           +I    D    K V+ ++A   +++ S      YE +       ++  +    L    G 
Sbjct: 483 LIKIYKDYIDLKDVLFERAYCAKELES------YEELIAYCNAALKVDKNNLKLYFWRGI 536

Query: 458 QKHAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPN-- 515
            K+  S   +A  DL+ A K+D N     Y +G  Y     +EEA++  D  I  N    
Sbjct: 537 AKYNLSLEEEAIEDLNRALKIDKNHNGVRYYKGLCYEDLCMFEEAIKCYDSVILSNEEDD 596

Query: 516 ---FHVARAQRHF 525
              FH A+ +R+ 
Sbjct: 597 ESYFHRAKCKRNL 609



 Score = 42.0 bits (97), Expect = 0.78,   Method: Compositional matrix adjust.
 Identities = 44/193 (22%), Positives = 90/193 (46%), Gaps = 10/193 (5%)

Query: 163 AEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQRHFVVHKMIVPG 222
           A KVD N    Y+ RG         EEA+ +L++ + ++ N +  R       +K +   
Sbjct: 520 ALKVDKNNLKLYFWRGIAKYNLSLEEEAIEDLNRALKIDKNHNGVR------YYKGLCYE 573

Query: 223 DRERVEQSLKEFRNFVDTHSNVVEACTLFAQVLVDQEDFDGAEEYFNRSIRVDPENASLY 282
           D    E+++K + + + ++    E+    A+   + E ++ A +  N  +++  +    +
Sbjct: 574 DLCMFEEAIKCYDSVILSNEEDDESYFHRAKCKRNLEKYNEALKDINECLKIIDDIGEYW 633

Query: 283 VHRAMLMLQARGNVDEAIKLIEKAISIDKSCMFAYETLGTIEVQRGRLEEAVKCFNKALP 342
           + +A + L   G  DE+ +  +KA  ++      Y  +G ++V     +EA+K  N AL 
Sbjct: 634 IEKAQI-LSFLGKYDESFEAAKKASELEPKSYKCYHFMGAVKVYSQDFKEAIKYLNMALN 692

Query: 343 LARDEAE-LSHIY 354
           L  DE++  +H Y
Sbjct: 693 L--DESQNWTHYY 703



 Score = 38.5 bits (88), Expect = 8.2,   Method: Compositional matrix adjust.
 Identities = 75/378 (19%), Positives = 159/378 (42%), Gaps = 71/378 (18%)

Query: 147 LHAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIAL------ 200
           L+    + +A    ++A K      D ++ R  +     +Y+EAL + +  +        
Sbjct: 393 LYEIDKYDEALISYEKALKYQKEYPDVFFNRAYLKSDLEKYDEALEDSELAVKYYKKQNN 452

Query: 201 NPNFHVARAQRHFVVHKMIVPGDRERVEQSLKEFRNFVDTHSNVVEACTLFAQVLVDQED 260
             ++  + +QR ++  K+      ER ++++ E+   +  + + ++   +  +     ++
Sbjct: 453 TQDYVNSFSQRAWIKSKL------ERFQEAMDEYNELIKIYKDYIDLKDVLFERAYCAKE 506

Query: 261 FDGAEE---YFNRSIRVDPENASLYVHRAMLMLQARGNV---DEAIKLIEKAISIDKSCM 314
            +  EE   Y N +++VD  N  LY  R +    A+ N+   +EAI+ + +A+ IDK+  
Sbjct: 507 LESYEELIAYCNAALKVDKNNLKLYFWRGI----AKYNLSLEEEAIEDLNRALKIDKNHN 562

Query: 315 FAYETLGTIEVQRGRLEEAVKCFNKALPLARDEAELSHIYSLRDAAIAQMKVCERYNIKK 374
                 G         EEA+KC++  + L+ +E + S+ +  +         C+R N++K
Sbjct: 563 GVRYYKGLCYEDLCMFEEAIKCYDSVI-LSNEEDDESYFHRAK---------CKR-NLEK 611

Query: 375 KVSPRSQNITKNEKLAIKQLRENNDIIIRPADKGGKTVVMDKADYTQKMTSILNSNDYEI 434
                      NE  A+K + E               ++ D  +Y  +   IL+      
Sbjct: 612 Y----------NE--ALKDINE------------CLKIIDDIGEYWIEKAQILS------ 641

Query: 435 IPGDPTKTIEESEKYGNLENESGQ--------KHAASDFTKAFADLDEAEKVDPNVADSY 486
             G   ++ E ++K   LE +S +        K  + DF +A   L+ A  +D +   ++
Sbjct: 642 FLGKYDESFEAAKKASELEPKSYKCYHFMGAVKVYSQDFKEAIKYLNMALNLDESQNWTH 701

Query: 487 YQRGQIYCLFGQYEEALR 504
           Y + +     G + EAL+
Sbjct: 702 YYKAECLRNLGDFHEALQ 719


>gi|374578333|ref|ZP_09651429.1| tetratricopeptide repeat protein,tetratricopeptide repeat protein
           [Bradyrhizobium sp. WSM471]
 gi|374426654|gb|EHR06187.1| tetratricopeptide repeat protein,tetratricopeptide repeat protein
           [Bradyrhizobium sp. WSM471]
          Length = 461

 Score = 65.5 bits (158), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 66/287 (22%), Positives = 125/287 (43%), Gaps = 24/287 (8%)

Query: 268 FNRSIRVDPENASLYVHRAMLMLQARGNVDEAIKLIEKAISIDKSCMFAYETLGTIEVQR 327
            +R+I +D +NA  +  R  L+ +A G+++ A   + KAI +D     +YE  G +   +
Sbjct: 95  IDRAIALDGKNAKAWRLRGDLLREAGGDLNRAAADLSKAIELDPQNSESYELRGVVYTNQ 154

Query: 328 GRLEEAVKCFNKALPLARDEAELS-------HIYSLRDAAIAQMKVCERYNIKKKVSPRS 380
            RL+ A+  +++A+ L  D A+         ++    + AI  +    R +      PRS
Sbjct: 155 RRLDRALADYDQAIKLKPDNAQAWSDRGVTYYLGGDNEKAIRDLSEALRLDPN---GPRS 211

Query: 381 QNITKNEKLAIKQLRENNDIIIRPADKGGKTVVMDKAD---YTQKMTSILNSNDYEIIPG 437
                N   A K+L +    + +     G+ + +D      Y  +  S+    +Y+    
Sbjct: 212 YT---NRGAAYKKLGQ----LAKAVFDDGEAIRLDPKVPEYYDNRGLSLAAMGEYDKAIA 264

Query: 438 DPTKTIEESEKYGNLENESGQKHAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFG 497
           D  + +  + +     N     H   +   A +D + A K+DPN A +Y  R  +Y   G
Sbjct: 265 DYDQALRLAPRPNFFTNRGDSYHLKGELGAALSDYEAALKLDPNFAQTYNNRAVLYKKMG 324

Query: 498 QYEEALRNLDKTIALNPNFHVARAQRHFVWTSTLAELMAFSDEFMIP 544
           + ++AL + +  + L+P    A A R     + +AE+  F  E + P
Sbjct: 325 ERKKALADYETALRLDPGNDNAAAGRR----AMIAEIAKFGGEPLRP 367



 Score = 64.7 bits (156), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 85/336 (25%), Positives = 148/336 (44%), Gaps = 33/336 (9%)

Query: 81  IRHCTEEIESTSSNHT-KALARLLRATVYIFTSQS-TKAIEDLTQLVEDTSVDPKIKVNA 138
           I  C+  ++  S+  + +A A L+RA     TS   T+A+ D+ + +   ++D K    A
Sbjct: 53  IPACSAIVDQASNPSSDRAAALLVRADANARTSGGLTQALRDIDRAI---ALDGK-NAKA 108

Query: 139 HIKRAVVHLHAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTI 198
              R  +   A  D  +A ADL +A ++DP  ++SY  RG +Y    + + AL + D+ I
Sbjct: 109 WRLRGDLLREAGGDLNRAAADLSKAIELDPQNSESYELRGVVYTNQRRLDRALADYDQAI 168

Query: 199 ALNPNFHVARAQRHFVVHKMIVPGDRERVEQSLKEF----RNFVDTHSNVVEACTLFAQV 254
            L P+   A + R    +   + GD E+  + L E      N   +++N   A     Q+
Sbjct: 169 KLKPDNAQAWSDRGVTYY---LGGDNEKAIRDLSEALRLDPNGPRSYTNRGAAYKKLGQL 225

Query: 255 LVDQEDFDGAEEYFNRSIRVDPENASLYVHRAMLMLQARGNVDEAIKLIEKAISIDKSCM 314
              +  FD  E     +IR+DP+    Y +R  L L A G  D+AI   ++A+ +     
Sbjct: 226 A--KAVFDDGE-----AIRLDPKVPEYYDNRG-LSLAAMGEYDKAIADYDQALRLAPRPN 277

Query: 315 FAYETLGTIEVQRGRLEEAVKCFNKALPLARDEAELSHIYSLRDAAIAQMKVCER----- 369
           F +   G     +G L  A+  +  AL L   +   +  Y+ R  A+   K+ ER     
Sbjct: 278 F-FTNRGDSYHLKGELGAALSDYEAALKL---DPNFAQTYNNR--AVLYKKMGERKKALA 331

Query: 370 -YNIKKKVSPRSQNITKNEKLAIKQLRENNDIIIRP 404
            Y    ++ P + N     +  I ++ +     +RP
Sbjct: 332 DYETALRLDPGNDNAAAGRRAMIAEIAKFGGEPLRP 367


>gi|365988022|ref|XP_003670842.1| hypothetical protein NDAI_0F02810 [Naumovozyma dairenensis CBS 421]
 gi|343769613|emb|CCD25599.1| hypothetical protein NDAI_0F02810 [Naumovozyma dairenensis CBS 421]
          Length = 609

 Score = 65.5 bits (158), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 79/332 (23%), Positives = 153/332 (46%), Gaps = 33/332 (9%)

Query: 50  ELTNGDTNESHELDLLSKAKRAFEHED--YLTAIRHCTEEIESTSSNHT----KALARLL 103
           EL NG TN      L   ++  F+  D  +L A     +++     N       A+A   
Sbjct: 273 ELMNGLTN------LYKNSEEGFQIADKSFLKAAELFKDQLSQNKDNEAIKEKTAIALEY 326

Query: 104 RATVYIFTSQSTKAIEDLTQLVEDTSVDPKIKVNAHIKRAVVHLHAASDFTKAFADLDEA 163
              +Y   +++ KA + +   +E   + P+  VN++I ++++   + +  ++   + D+A
Sbjct: 327 SGILYYMKNETLKAHDSIKSAIE---LHPR--VNSYIYQSLIGSDSTTT-SEYLQNFDKA 380

Query: 164 EKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQRHFVVHKMIVPGD 223
            +++PN    YY RGQ Y +  QYE+A ++ DK   L+ N   A  Q   + ++     D
Sbjct: 381 LELEPNNPAIYYHRGQSYFIAQQYEKAGKDFDKVKELDENNIFAYIQLACLAYRESKFDD 440

Query: 224 RERVEQSLKEFRNFVDTHSNVVEACTLFAQVLVDQEDFDGAEEYFNRSIRVD---PENAS 280
            E +     E R    T     E    FA+VL D+ + + A + F+++I ++   PE   
Sbjct: 441 CETL---FSEARRKFPT---APEVPNFFAEVLADRGESEKAMKEFDKAIELEAKTPEEIH 494

Query: 281 L----YVHRAMLMLQARG--NVDEAIKLIEKAISIDKSCMFAYETLGTIEVQRGRLEEAV 334
           +     + +A L++      N  E I+L+++A   D     A   L  +++Q+  ++EA+
Sbjct: 495 VGIAPLIGKATLLISKPTVENFVEGIQLLQEACDKDPRSEQARLGLAQLKLQQEDIDEAI 554

Query: 335 KCFNKALPLARDEAELSHIYSLRDAAIAQMKV 366
           + F +A  LA+   E     +  +AA  Q ++
Sbjct: 555 QLFEEAAELAKSYEEKLQATTFAEAAKIQKRI 586


>gi|298252040|ref|ZP_06975843.1| serine/threonine protein kinase with TPR repeats [Ktedonobacter
           racemifer DSM 44963]
 gi|297546632|gb|EFH80500.1| serine/threonine protein kinase with TPR repeats [Ktedonobacter
           racemifer DSM 44963]
          Length = 1170

 Score = 65.5 bits (158), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 96/425 (22%), Positives = 175/425 (41%), Gaps = 78/425 (18%)

Query: 147 LHAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHV 206
           L+    + +A A  +E  ++DPN A  Y  +G +    G+YEEA+   ++ I L+P    
Sbjct: 345 LNELGKYEEALATYEEVIRLDPNGARIYSNKGSVLFQLGRYEEAVAAFEEHIRLDPE--- 401

Query: 207 ARAQRHFVVHKMIVPGDRERVEQSLKEFRNFVDTH--------SNVVEACTLFAQVLVDQ 258
              + +F   K ++  DR     ++ E   ++D +         N++ A   + + LV  
Sbjct: 402 -SPEAYFNKGKTLIALDRPEEALAMFEQALWLDPYDARKYYHKGNMLMALKRYEEALV-- 458

Query: 259 EDFDGAEEYFNRSIRVDPENASLYVHRAMLMLQARGNVDEAIKLIEKAISIDKSCMFAYE 318
                    F +SI++DPE    Y  R  + L   G   EA+ + E+ ++ D +    Y 
Sbjct: 459 --------VFEQSIQLDPEPVDAYAQRGDI-LSELGRYAEALAMYEQVLARDPNRAEMYV 509

Query: 319 TLGTIEVQRGRLEEAVKCFNKALPLARDEAELSHIYSLRDAAIAQMKVCERYN-IKKKVS 377
             G++     R EEA     +AL L   +  L+ +Y      +AQ    +R   +++ V+
Sbjct: 510 KQGSLLYMLDRFEEAADALEQALCL---DPGLTQVY------LAQAGPLQRLGRLEEAVA 560

Query: 378 PRSQNITKNEK------------LAIKQLRENNDII-----IRPAD------KGGKTVVM 414
              Q I  + K            + +K+  E  + I     +RP D      +G   V +
Sbjct: 561 ALEQAIHLDPKNADAYFSQGGMLITLKRYGEALNAIEQYMRLRPDDAFAYVARGEVLVSL 620

Query: 415 DKADYTQKMTSI-----LNSND---------YEII--PG-DPTKTIEESEKYGNLENESG 457
           ++ +  + + ++     LN ND          E++  PG +    +E+      +     
Sbjct: 621 NRPE--EALEAVEQAIRLNPNDSRAYALKKKIELVLSPGKEAPAELEQKTVPAQVGAFVA 678

Query: 458 QKHAASDFTKA---FADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNP 514
           Q  A  +  +     A LDEA ++DP  A  +  RG       +Y+EAL      I L+P
Sbjct: 679 QGEALEEGKRCEEILAVLDEAIRLDPTNAYHHNDRGTALFFLKRYKEALTEFQLAILLHP 738

Query: 515 NFHVA 519
            + +A
Sbjct: 739 RYAIA 743



 Score = 47.8 bits (112), Expect = 0.015,   Method: Compositional matrix adjust.
 Identities = 64/305 (20%), Positives = 127/305 (41%), Gaps = 47/305 (15%)

Query: 226 RVEQSLKEFRNFVDTHSNVVEACTLFAQVLVDQEDFDGAEEYFNRSIRVDPENASLYVHR 285
           + E++L  +   +    N     +    VL     ++ A   F   IR+DPE+   Y ++
Sbjct: 350 KYEEALATYEEVIRLDPNGARIYSNKGSVLFQLGRYEEAVAAFEEHIRLDPESPEAYFNK 409

Query: 286 AMLMLQARGNVDEAIKLIEKAISIDKSCMFAYETLGTIEVQRGRLEEAVKCFNKALPLAR 345
              ++ A    +EA+ + E+A+ +D      Y   G + +   R EEA+  F +++ L  
Sbjct: 410 GKTLI-ALDRPEEALAMFEQALWLDPYDARKYYHKGNMLMALKRYEEALVVFEQSIQL-- 466

Query: 346 DEAELSHIYSLRDAAIAQM-KVCERYNIKKKVSPRSQNITKNEKLAIKQLRENNDIIIRP 404
            + E    Y+ R   ++++ +  E   + ++V  R  N     ++ +KQ           
Sbjct: 467 -DPEPVDAYAQRGDILSELGRYAEALAMYEQVLARDPN---RAEMYVKQ----------- 511

Query: 405 ADKGGKTVVMDK----ADYTQKMTSILNSNDYEIIPGDPTKTIEESEKYGNLENESGQKH 460
              G    ++D+    AD  ++   +           DP  T     + G L+       
Sbjct: 512 ---GSLLYMLDRFEEAADALEQALCL-----------DPGLTQVYLAQAGPLQR------ 551

Query: 461 AASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPN---FH 517
                 +A A L++A  +DP  AD+Y+ +G +     +Y EAL  +++ + L P+    +
Sbjct: 552 -LGRLEEAVAALEQAIHLDPKNADAYFSQGGMLITLKRYGEALNAIEQYMRLRPDDAFAY 610

Query: 518 VARAQ 522
           VAR +
Sbjct: 611 VARGE 615



 Score = 44.7 bits (104), Expect = 0.14,   Method: Compositional matrix adjust.
 Identities = 86/415 (20%), Positives = 169/415 (40%), Gaps = 53/415 (12%)

Query: 119 EDLTQLVEDTSVDPKIKVNAHIKRAVVHLHAASDFTKAFADLDEAEKVDPNVADSYYQRG 178
           E +  L +   +DPK   +A+  +  + L     + +A   +++  ++ P+ A +Y  RG
Sbjct: 557 EAVAALEQAIHLDPK-NADAYFSQGGM-LITLKRYGEALNAIEQYMRLRPDDAFAYVARG 614

Query: 179 QIYCLFGQYEEALRNLDKTIALNPNFHVARAQRHFVVHKMIVPGDRERVEQSLKEFRNFV 238
           ++     + EEAL  +++ I LNPN   A A +   +  ++ PG     E   K      
Sbjct: 615 EVLVSLNRPEEALEAVEQAIRLNPNDSRAYALKK-KIELVLSPGKEAPAELEQK------ 667

Query: 239 DTHSNVVEACTLFAQVLVDQEDFDGAEEYFNRSIRVDPENASLYVHRAMLMLQARGNVDE 298
            T    V A     + L + +  +      + +IR+DP NA  Y H        RG    
Sbjct: 668 -TVPAQVGAFVAQGEALEEGKRCEEILAVLDEAIRLDPTNA--YHH------NDRGTALF 718

Query: 299 AIKLIEKAISIDKSCMFAYETLGTIEVQRGRLEEAVKCFNKALPLARDEAELSHIYSLRD 358
            +K  ++A++  +  +  +         +GR+   +KC+ +AL    +   L       D
Sbjct: 719 FLKRYKEALTEFQLAILLHPRYAIAHQNKGRILFELKCYEEALAEFEEALRL-------D 771

Query: 359 AAIAQMKVCERYNIKKKVSPRSQNITKNEKLAI----KQLRENNDIIIRPADKGGKTVVM 414
             IA+  + +   + +         T  + + +     ++  N   ++R  ++  + + +
Sbjct: 772 PTIAEAYLNKGLLLLELERYEEALATFQDGVQLDPPDARIYHNLGAVLRMLERDEEALDV 831

Query: 415 DKADYTQKMTSILNSNDYEIIPGDPTKTIEESEKYGNLENESGQKHAASDFTKAFADLDE 474
               Y Q +   L S D  +  G                   G  +A   + +A   +++
Sbjct: 832 ----YEQMLQLGLGSADLYLSQG-------------------GALYALERYEEALVAVEQ 868

Query: 475 AEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARA-QRHFVWT 528
           A ++DP+   S+  +GQI      YEEAL   ++T+ LNP+    R  Q  F++T
Sbjct: 869 ALRLDPDNIASHLAQGQILYSLEHYEEALVVAEQTLHLNPDTIALRLDQGQFLYT 923



 Score = 40.8 bits (94), Expect = 1.8,   Method: Compositional matrix adjust.
 Identities = 34/144 (23%), Positives = 63/144 (43%), Gaps = 15/144 (10%)

Query: 64   LLSKAKRAFEHEDYLTAIRHCTEEIESTSSNHTKALARLLRATVYIFTSQSTKAIEDLTQ 123
            L+++ K  F+ + Y  A+    E+      NH +A    +++ V +  S    A+E L Q
Sbjct: 1004 LVARGKDLFKRKQYNEAL-EVIEQAIGLDPNHAEAYE--VKSRVLVGLSLKKAALEVLEQ 1060

Query: 124  LVEDTSVDPKIKVNAHIKRAVVH---LHAASDFTKAFADLDEAEKVDPNVADSYYQRGQI 180
                      I++N +      +   LH      +A    ++    DP  A +Y+ +G+I
Sbjct: 1061 ---------AIRLNPYYSDYSSYGLLLHELGRHREALKAFEQHIHFDPGFAPAYFMKGKI 1111

Query: 181  YCLFGQYEEALRNLDKTIALNPNF 204
                 +YE+AL   ++ I L+PN 
Sbjct: 1112 LLFLKRYEKALIEFERAIHLDPNI 1135



 Score = 40.0 bits (92), Expect = 2.9,   Method: Compositional matrix adjust.
 Identities = 33/142 (23%), Positives = 67/142 (47%), Gaps = 8/142 (5%)

Query: 153  FTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQRH 212
            + +A   +++A  +DPN A++Y  + ++       + AL  L++ I LNP ++   +   
Sbjct: 1017 YNEALEVIEQAIGLDPNHAEAYEVKSRVLVGLSLKKAALEVLEQAIRLNP-YYSDYSSYG 1075

Query: 213  FVVHKMIVPGDRERVEQSLKEFRNFVDTHSNVVEACTLFAQVLVDQEDFDGAEEYFNRSI 272
             ++H++       R  ++LK F   +        A  +  ++L+  + ++ A   F R+I
Sbjct: 1076 LLLHEL------GRHREALKAFEQHIHFDPGFAPAYFMKGKILLFLKRYEKALIEFERAI 1129

Query: 273  RVDPENASLYVHRAMLMLQARG 294
             +DP  A  Y  +    LQA G
Sbjct: 1130 HLDPNIADFYQGKGK-ALQALG 1150



 Score = 39.7 bits (91), Expect = 4.2,   Method: Compositional matrix adjust.
 Identities = 23/82 (28%), Positives = 40/82 (48%), Gaps = 4/82 (4%)

Query: 437 GDPTKTIEESEK----YGNLENESGQKHAASDFTKAFADLDEAEKVDPNVADSYYQRGQI 492
           G P    E+S +    +  L N +   +    + +A A  +E  ++DPN A  Y  +G +
Sbjct: 319 GRPYPRTEKSHRAIPRFHTLTNRANSLNELGKYEEALATYEEVIRLDPNGARIYSNKGSV 378

Query: 493 YCLFGQYEEALRNLDKTIALNP 514
               G+YEEA+   ++ I L+P
Sbjct: 379 LFQLGRYEEAVAAFEEHIRLDP 400



 Score = 39.3 bits (90), Expect = 5.5,   Method: Compositional matrix adjust.
 Identities = 79/385 (20%), Positives = 159/385 (41%), Gaps = 51/385 (13%)

Query: 165  KVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQRHF-VVHKMIVPGD 223
            ++DP +A++Y  +G +     +YEEAL      + L+P    AR   +   V +M+    
Sbjct: 769  RLDPTIAEAYLNKGLLLLELERYEEALATFQDGVQLDPP--DARIYHNLGAVLRML---- 822

Query: 224  RERVEQSLKEFRNFVDTHSNVVEACTLFAQVLVDQEDFDGAEEYFNRSIRVDPENASLYV 283
             ER E++L  +   +       +        L   E ++ A     +++R+DP+N + ++
Sbjct: 823  -ERDEEALDVYEQMLQLGLGSADLYLSQGGALYALERYEEALVAVEQALRLDPDNIASHL 881

Query: 284  HRAMLMLQARGNVDEAIKLIEKAISIDKSCMFAYETLGTIEVQRGRLEEAVKCFNKALPL 343
             +  ++     + +EA+ + E+ + ++   +      G      GR EEA+    +AL L
Sbjct: 882  AQGQILYSLE-HYEEALVVAEQTLHLNPDTIALRLDQGQFLYTLGRYEEALAAVEQALRL 940

Query: 344  ARDEAELSHIYSLRDAAIAQMKVCERYNIKKKVSPRSQNITKNEKLAIKQLRENNDIIIR 403
              D  ++  +  L +  I   +       +++  P +  I       ++ L+   + +  
Sbjct: 941  --DPEDIRAL--LLEEGIQSARSSGTQPERRRGIPLASQIEMVPDKVLEALKRQEEAMHP 996

Query: 404  PADKGGKTV-----VMDKADYTQKMTSI-----LNSNDYE-------IIPGDPTK----- 441
              D+  K V     +  +  Y + +  I     L+ N  E       ++ G   K     
Sbjct: 997  DPDRIEKLVARGKDLFKRKQYNEALEVIEQAIGLDPNHAEAYEVKSRVLVGLSLKKAALE 1056

Query: 442  TIEES----------EKYGNLENESGQKHAASDFTKAFADLDEAEKVDPNVADSYYQRGQ 491
             +E++            YG L +E G+   A    KAF   ++    DP  A +Y+ +G+
Sbjct: 1057 VLEQAIRLNPYYSDYSSYGLLLHELGRHREA---LKAF---EQHIHFDPGFAPAYFMKGK 1110

Query: 492  IYCLFGQYEEALRNLDKTIALNPNF 516
            I     +YE+AL   ++ I L+PN 
Sbjct: 1111 ILLFLKRYEKALIEFERAIHLDPNI 1135


>gi|428319715|ref|YP_007117597.1| glycosyl transferase family 2 [Oscillatoria nigro-viridis PCC 7112]
 gi|428243395|gb|AFZ09181.1| glycosyl transferase family 2 [Oscillatoria nigro-viridis PCC 7112]
          Length = 1533

 Score = 65.5 bits (158), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 83/386 (21%), Positives = 169/386 (43%), Gaps = 39/386 (10%)

Query: 169 NVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQRHFVVHKMIVPGDRERVE 228
           + A  + Q+G+IY   G+ EEA+ + ++ + ++PNF  A       +        + R+E
Sbjct: 9   STAVQFNQQGEIYLSQGKIEEAIASCEQALKIHPNFAPAYKTLGNALQA------QARME 62

Query: 229 QSLKEFRNFVDTHSNVVEACTLFAQVLVDQEDFDGAEEYFNRSIRVDPENASLYVHRAML 288
           ++   +   ++   N  E       +   Q+ +  A  ++ ++I + P  A +Y + A +
Sbjct: 63  EARHWYAKAIEIEPNFAEVYANLGSLGAQQQKWQEAIGFYQKAIAIKPNFAGVYRNLAKV 122

Query: 289 MLQARGNVDEAIKLIEKAISIDKSCMFAYETL--GTIEVQRGRLEEAVKCFNKALPLARD 346
             Q  G  +EA +   +A S++   +   E L  G    ++ +  EA+ C+++A+ L  +
Sbjct: 123 FGQI-GKPEEAQQCWYQAFSLEPEKVAPGEHLNMGDAFFRQEKFAEAIACYDRAIKLNPN 181

Query: 347 EAELSHIYSLRDAAIAQMKVCERYNIKKKV----SPRSQNITKNEKLAIKQLRENNDIII 402
            A  +   +L +A   Q K+ E     +K     +  ++N ++ ++        N  +  
Sbjct: 182 VA--TAYQNLGEALKKQGKLEEATAYYRKAIELNAANARNGSEGQQTLAGATATNGAVKQ 239

Query: 403 RPADKGGKTVVMD------KADYTQKMTSILNSND---YEIIP------GDPTKTIEESE 447
           +PA    +  V        K    Q + S +N  D   Y+I+       G   + I   +
Sbjct: 240 QPAATAVQQAVKPPVQQAVKPPVQQPVNSTINIEDPEAYKILAEGYFAQGKLEQAIAACK 299

Query: 448 KYGNLENESGQKHAASDFTKAFADLDEAE-------KVDPNVADSYYQRGQIYCLFGQYE 500
           K   ++ E+       +  +A   +DEA+       +++PN A++Y   G I     Q++
Sbjct: 300 KALQIKPEAPLYKMLGNALQAGGKIDEAKSCYVKAIEINPNFAEAYANYGSICAQQEQWQ 359

Query: 501 EALRNLDKTIALNPNFHVARAQRHFV 526
           +A+   +K IAL P+F  A A R+F 
Sbjct: 360 QAVSAYEKAIALKPDF--AGAFRNFA 383



 Score = 63.9 bits (154), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 55/202 (27%), Positives = 97/202 (48%), Gaps = 9/202 (4%)

Query: 147 LHAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHV 206
           L A     +A +   +A +++PN A++Y   G I     Q+++A+   +K IAL P+F  
Sbjct: 318 LQAGGKIDEAKSCYVKAIEINPNFAEAYANYGSICAQQEQWQQAVSAYEKAIALKPDF-- 375

Query: 207 ARAQRHFVVHKMIVP-GDRERVEQSLKEFRNF-VDTHSNVVEACTLFAQVLVDQEDFDGA 264
           A A R+F   K++   G  E   ++   +R F +D  S   E     A+ L++Q   D  
Sbjct: 376 AGAFRNFA--KLLTQLGKSEEAAEAW--YRAFAIDPKSCTAEEHENLAKTLIEQGKVDKG 431

Query: 265 EEYFNRSIRVDPENASLYVHRAMLMLQARGNVDEAIKLIEKAISIDKSCMFAYETLGTIE 324
            E + R++ ++P NA    H    +L+ +   + A+     AI  + +  +++  L    
Sbjct: 432 IECYRRAVELNP-NAGAAYHELGEILKGQEQWEAAVDAYTNAIRNNPNLSWSHNNLAESL 490

Query: 325 VQRGRLEEAVKCFNKALPLARD 346
           V+  R EEAV  + KA+ L  D
Sbjct: 491 VKLERWEEAVNAYRKAIELNPD 512



 Score = 58.2 bits (139), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 94/389 (24%), Positives = 156/389 (40%), Gaps = 65/389 (16%)

Query: 153 FTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNP---------- 202
           F +A A  D A K++PNVA +Y   G+     G+ EEA     K I LN           
Sbjct: 165 FAEAIACYDRAIKLNPNVATAYQNLGEALKKQGKLEEATAYYRKAIELNAANARNGSEGQ 224

Query: 203 ---------NFHVARAQRHFVVHKMIVPGDRERVEQSLKEFRNFVDTHSNV--VEACTLF 251
                    N  V +      V + + P  ++ V+  +++    V++  N+   EA  + 
Sbjct: 225 QTLAGATATNGAVKQQPAATAVQQAVKPPVQQAVKPPVQQP---VNSTINIEDPEAYKIL 281

Query: 252 AQVLVDQEDFDGAEEYFNRSIRVDPENASLYVHRAML--MLQARGNVDEAIKLIEKAISI 309
           A+    Q   + A     +++++ PE A LY    ML   LQA G +DEA     KAI I
Sbjct: 282 AEGYFAQGKLEQAIAACKKALQIKPE-APLY---KMLGNALQAGGKIDEAKSCYVKAIEI 337

Query: 310 DKSCMFAYETLGTIEVQRGRLEEAVKCFNKALPLARDEA-ELSHIYSLRDAAIAQMKVCE 368
           + +   AY   G+I  Q+ + ++AV  + KA+ L  D A    +   L        +  E
Sbjct: 338 NPNFAEAYANYGSICAQQEQWQQAVSAYEKAIALKPDFAGAFRNFAKLLTQLGKSEEAAE 397

Query: 369 RYNIKKKVSPRSQNITKNEKLAIKQLRENNDIIIRPADKGGKTVVMDKADYTQKMTSILN 428
            +     + P+S    ++E LA K L E   +     DKG +                  
Sbjct: 398 AWYRAFAIDPKSCTAEEHENLA-KTLIEQGKV-----DKGIECY---------------- 435

Query: 429 SNDYEIIPGDPTKTIEESEKYGNLENESGQKHAASDFTKAFAD-LDEAEKVDPNVADSYY 487
                       + +E +   G   +E G+     +  +A  D    A + +PN++ S+ 
Sbjct: 436 -----------RRAVELNPNAGAAYHELGEILKGQEQWEAAVDAYTNAIRNNPNLSWSHN 484

Query: 488 QRGQIYCLFGQYEEALRNLDKTIALNPNF 516
              +      ++EEA+    K I LNP+F
Sbjct: 485 NLAESLVKLERWEEAVNAYRKAIELNPDF 513



 Score = 55.8 bits (133), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 101/491 (20%), Positives = 197/491 (40%), Gaps = 74/491 (15%)

Query: 48  GVELTNGDTNESHELDLLSKAKRAFEH--EDYLTAIRHCTEEIESTSSNHTKALARLLRA 105
            VEL        HEL  + K +  +E   + Y  AIR+    +  + +N  ++L +L R 
Sbjct: 438 AVELNPNAGAAYHELGEILKGQEQWEAAVDAYTNAIRN-NPNLSWSHNNLAESLVKLER- 495

Query: 106 TVYIFTSQSTKAIEDLTQLVEDTSVDPKIKVNAHIKRAVVHLHAASDFTKAFADLDEAEK 165
                  ++  A     +L  D S        +H   A V L     + +A     +A +
Sbjct: 496 -----WEEAVNAYRKAIELNPDFSW-------SHNNLADVLLKL-ERWEEAVESYRKATE 542

Query: 166 VDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQRHFVVHKMIVPG--D 223
           ++P+ + S+          G+++EA+    ++I LNP+        HF  H  +     +
Sbjct: 543 LNPDFSWSHNYLADALIKLGRWDEAISAYQRSIELNPD--------HFWAHNNLAEALVN 594

Query: 224 RERVEQSLKEFRNFVDTHSNVVEACTLFAQVLVDQEDFDGAEEYFNRSIRVDPENASLYV 283
            ER ++++  +R   + + N   + +     L++ E ++ A + + R+  ++ +    Y 
Sbjct: 595 LERWDEAVVAYRRANEVNPNFFWSQSKLGDALLEMERWEEAIDVYRRAAELNRDFPWTYY 654

Query: 284 HRAMLMLQARGNVDEAIKLIEKAISIDKSCMFAYETLGTIEVQRGR--LEEAVKCFNKAL 341
           + A    +     DE+I    +A  I     +  + L      R +  L+EA++ + +A+
Sbjct: 655 NMAT-AFEKLERWDESIAAYRRAAEIQADLPWLSQKLADALRMRSQWDLKEAMRLYRRAI 713

Query: 342 PLARDEAELSHIYSLRDAAIAQMKVCERYNIKKKVSPRSQNITKNEKLAIKQLRENND-- 399
              RD+ +L H            K  E       ++P   ++    +LA   +R+N    
Sbjct: 714 QENRDDVQLYH------------KALE-------IAPNDADLYV--ELANALVRKNWPDG 752

Query: 400 --------IIIRPADK---GGKTVVMDKADYT---QKMTSILNSNDYEIIPGDPTKTIEE 445
                   + IRP DK   G    V+ K   +   +K    ++ N    I   P    E 
Sbjct: 753 AIVFYQMALQIRPDDKAISGLLEEVLKKKGVSRGAEKSDRAVHGNSGNAIEHTPGIAAEY 812

Query: 446 SEKYGNLENESGQKHAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRN 505
            E   +L+ E         F +A A   +A  ++PN   +++  G +    G+ +E++++
Sbjct: 813 HELGASLQEEG-------KFAEAVAAYRKAISINPNYFGTHHNLGDVLKWIGKVDESIKS 865

Query: 506 LDKTIALNPNF 516
             K   LNPNF
Sbjct: 866 YHKAAELNPNF 876



 Score = 45.1 bits (105), Expect = 0.091,   Method: Compositional matrix adjust.
 Identities = 35/128 (27%), Positives = 62/128 (48%), Gaps = 6/128 (4%)

Query: 255 LVDQEDFDGAEEYFNRSIRVDPENASLYVHRAMLMLQARGNVDEAIKLIEKAISIDKSCM 314
           L ++  F  A   + ++I ++P     + H    +L+  G VDE+IK   KA  ++ + +
Sbjct: 819 LQEEGKFAEAVAAYRKAISINPNYFGTH-HNLGDVLKWIGKVDESIKSYHKAAELNPNFV 877

Query: 315 FAYETLGTIEVQRGRLEEAVKCFNKALPLARDEAELSHIYSLRDAAIAQMKVC---ERYN 371
           +++  L  +  Q GRL+EAV  + KA+ +A D       Y+L      Q K+    E Y 
Sbjct: 878 WSHHNLADVYQQEGRLDEAVAAYRKAIEVAPDFG--WSYYNLAKTLAKQDKLSEALEAYQ 935

Query: 372 IKKKVSPR 379
              K+ P+
Sbjct: 936 TASKLDPK 943



 Score = 39.3 bits (90), Expect = 5.8,   Method: Compositional matrix adjust.
 Identities = 27/132 (20%), Positives = 60/132 (45%), Gaps = 8/132 (6%)

Query: 147 LHAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHV 206
           L     F +A A   +A  ++PN   +++  G +    G+ +E++++  K   LNPNF  
Sbjct: 819 LQEEGKFAEAVAAYRKAISINPNYFGTHHNLGDVLKWIGKVDESIKSYHKAAELNPNFVW 878

Query: 207 ARAQRHFVVHKMI-VPGDRERVEQSLKEFRNFVDTHSNVVEACTLFAQVLVDQEDFDGAE 265
           +        H +  V     R+++++  +R  ++   +   +    A+ L  Q+    A 
Sbjct: 879 SH-------HNLADVYQQEGRLDEAVAAYRKAIEVAPDFGWSYYNLAKTLAKQDKLSEAL 931

Query: 266 EYFNRSIRVDPE 277
           E +  + ++DP+
Sbjct: 932 EAYQTASKLDPK 943


>gi|354555592|ref|ZP_08974893.1| Tetratricopeptide TPR_1 repeat-containing protein [Cyanothece sp.
           ATCC 51472]
 gi|57864842|gb|AAW57017.1| conserved hypothetical protein [Cyanothece sp. ATCC 51142]
 gi|353552651|gb|EHC22046.1| Tetratricopeptide TPR_1 repeat-containing protein [Cyanothece sp.
           ATCC 51472]
          Length = 279

 Score = 65.5 bits (158), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 50/194 (25%), Positives = 87/194 (44%), Gaps = 7/194 (3%)

Query: 150 ASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARA 209
           A ++  A     E+ K+D   AD+YY RG  Y +  Q+EEA+ + +K I LN  F  A  
Sbjct: 67  AGNYQAAIEAFTESIKLDETDADAYYNRGYSYLVLEQFEEAINDYNKAIELNAEFAYAYG 126

Query: 210 QRHFVVHKMIVPGDRERVEQSLKEFRNFVDTHSNVVEACTLFAQVLVDQEDFDGAEEYFN 269
            R +  +++      +  EQS+K+    ++  +N  +          D +    A   +N
Sbjct: 127 NRCYAYYQL------KNYEQSIKDCSQAIELEANYADFYIYLGNAKDDLKMHQAAILAYN 180

Query: 270 RSIRVDPENASLYVHRAMLMLQARGNVDEAIKLIEKAISIDKSCMFAYETLGTIEVQRGR 329
           ++I ++  N   Y +RA L     G   +A++   KAI  + +   AY   G    +   
Sbjct: 181 QAIAINENNPKAYYNRA-LAYNRLGQSLQAVEDYTKAIQFNPNFADAYHNRGVTRFKLKE 239

Query: 330 LEEAVKCFNKALPL 343
           +E+A+    KA  L
Sbjct: 240 IEKAIADLEKAAEL 253



 Score = 46.6 bits (109), Expect = 0.037,   Method: Compositional matrix adjust.
 Identities = 23/66 (34%), Positives = 35/66 (53%)

Query: 462 ASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARA 521
           A ++  A     E+ K+D   AD+YY RG  Y +  Q+EEA+ + +K I LN  F  A  
Sbjct: 67  AGNYQAAIEAFTESIKLDETDADAYYNRGYSYLVLEQFEEAINDYNKAIELNAEFAYAYG 126

Query: 522 QRHFVW 527
            R + +
Sbjct: 127 NRCYAY 132


>gi|428315765|ref|YP_007113647.1| Tetratricopeptide TPR_1 repeat-containing protein [Oscillatoria
           nigro-viridis PCC 7112]
 gi|428239445|gb|AFZ05231.1| Tetratricopeptide TPR_1 repeat-containing protein [Oscillatoria
           nigro-viridis PCC 7112]
          Length = 1290

 Score = 65.5 bits (158), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 50/190 (26%), Positives = 88/190 (46%), Gaps = 7/190 (3%)

Query: 155 KAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQRHFV 214
           +A A   +A K+ P+   +Y   G      G+ E A+R+  + + L PNF   RA    +
Sbjct: 495 EAIAACQQALKIRPDFIYAYVTLGNALQAEGKTEAAIRSYSQALVLQPNFAEVRANIGSM 554

Query: 215 VHKMIVPGDRERVEQSLKEFRNFVDTHSNVVEACTLFAQVLVDQEDFDGAEEYFNRSIRV 274
             KM       R+E+++  ++  +    ++  A     +V     + + A   F R+  +
Sbjct: 555 YFKM------GRLEEAIAHYQQAIALSPDLAGAHWNLGKVYHQHGNIEAAIACFKRTSEL 608

Query: 275 DPENASLYVHRAML-MLQARGNVDEAIKLIEKAISIDKSCMFAYETLGTIEVQRGRLEEA 333
           +P+      H  +   L ++G  DEAI+  EKAI+I      AY  +G+   Q+G LE A
Sbjct: 609 NPQLVGADFHFNLGNRLFSQGKRDEAIECYEKAIAIKPDWAEAYGNIGSARSQQGNLEAA 668

Query: 334 VKCFNKALPL 343
           +  + KA+ L
Sbjct: 669 IAYYQKAVAL 678



 Score = 57.8 bits (138), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 47/197 (23%), Positives = 91/197 (46%), Gaps = 7/197 (3%)

Query: 155 KAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQRHF- 213
           +A A   +A  + P++A +++  G++Y   G  E A+    +T  LNP   +  A  HF 
Sbjct: 563 EAIAHYQQAIALSPDLAGAHWNLGKVYHQHGNIEAAIACFKRTSELNP--QLVGADFHFN 620

Query: 214 VVHKMIVPGDRERVEQSLKEFRNFVDTHSNVVEACTLFAQVLVDQEDFDGAEEYFNRSIR 273
           + +++   G R+   ++++ +   +    +  EA          Q + + A  Y+ +++ 
Sbjct: 621 LGNRLFSQGKRD---EAIECYEKAIAIKPDWAEAYGNIGSARSQQGNLEAAIAYYQKAVA 677

Query: 274 VDPENASLYVHRAMLMLQARGNVDEAIKLIEKAISIDKSCMFAYETLGTIEVQRGRLEEA 333
           + P    L+ + A   LQ +   DEAI   +  + I       +  LG     +GRLEEA
Sbjct: 678 LKPHLEVLHFNIANSFLQ-QNKYDEAITNYQNTLKIKPDWPEVHANLGNCFSMQGRLEEA 736

Query: 334 VKCFNKALPLARDEAEL 350
           +  + +AL L  + AE+
Sbjct: 737 LASYQQALGLKPNWAEV 753



 Score = 55.8 bits (133), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 74/375 (19%), Positives = 144/375 (38%), Gaps = 58/375 (15%)

Query: 151 SDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQ 210
            D   A  +  +A + +P  A+ + +  ++Y L G++E+A+ + +  I   PNF  A   
Sbjct: 229 GDLGGAIENYQKALEFNPEDAEVHKKLAEVYALQGEFEKAIASCNLAIKFKPNFAAAYLT 288

Query: 211 RHFVVHKMIVPGDRERVEQSLKEFRNFVDTHSNVVEACTLFAQVLVDQEDFDGAEEYFNR 270
               +H       + ++E +++ +   ++      EA      +     + + A  Y+ +
Sbjct: 289 MGNALH------SQNKLEMAIQAYLQALEIQPEFAEASANLGSMYYKLGELEQAANYYQK 342

Query: 271 SIRVDPENASLYVHRAMLMLQARGNVDEAIKLIEKAISIDKSCMFAYETLGTIEVQRGRL 330
           ++ ++P+ +S+ +                                    LG++  Q+ +L
Sbjct: 343 ALAINPQLSSVNL-----------------------------------MLGSVLQQQEKL 367

Query: 331 EEAVKCFNKAL---PLARDEAE-LSHIYSLRDAAIAQMKVCERYNIKKKVSPRSQNITKN 386
           + A+ C+ K L   P     AE LS + + +          E         P S N  K+
Sbjct: 368 DAAIACYQKVLQQQPGDASAAEKLSSLLAQKQRQTTDSNFIELETESGAAQPVSVN--KD 425

Query: 387 EKLAIKQLRENNDIIIRPADKGGKTVVMDKADYTQKMTSILNSNDYEIIPGDPTKTIEES 446
           E   ++    N  +   P  +   T   + A+ ++++TS LN  D            EE 
Sbjct: 426 EGYGLQPSSIN--LPPAPTTETLNTPFTNPAELSEQVTS-LNVPD-----SGQVANFEEV 477

Query: 447 EKYGNLENESGQKHAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNL 506
           E Y  L   + Q        +A A   +A K+ P+   +Y   G      G+ E A+R+ 
Sbjct: 478 EPYNKL---AEQFLVQGKIKEAIAACQQALKIRPDFIYAYVTLGNALQAEGKTEAAIRSY 534

Query: 507 DKTIALNPNFHVARA 521
            + + L PNF   RA
Sbjct: 535 SQALVLQPNFAEVRA 549



 Score = 40.0 bits (92), Expect = 3.2,   Method: Compositional matrix adjust.
 Identities = 42/192 (21%), Positives = 80/192 (41%), Gaps = 21/192 (10%)

Query: 144 VVHLHAASDFTK------AFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKT 197
           V+H + A+ F +      A  +     K+ P+  + +   G  + + G+ EEAL +  + 
Sbjct: 684 VLHFNIANSFLQQNKYDEAITNYQNTLKIKPDWPEVHANLGNCFSMQGRLEEALASYQQA 743

Query: 198 IALNPNFHVARAQRHFVVHKMIVPGDRERVEQSLKEFRNF---VDTHSNVVEACTLFAQV 254
           + L PN+         V  +M   G  ++ ++ L+   NF   ++ + N  EA      +
Sbjct: 744 LGLKPNWAE-------VYCRM---GHIQKQDKPLEAIANFEKAIECNPNFSEAYQQLCDL 793

Query: 255 LVDQEDFDGAEEYFNRSIRVDPENASLYVHRAMLMLQARGNVDEAIKLIEKAISIDKSCM 314
           L    +  GA    ++      ENA +    A +    +  V +  + I+K   I+K C 
Sbjct: 794 LSHSTNLAGARSVADKYCENCGENAPVMSATAYVFSYLQSGVSK--QAIQKLEEIEKLCY 851

Query: 315 FAYETLGTIEVQ 326
              ET   IE++
Sbjct: 852 EKVETFSVIELK 863


>gi|300869518|ref|ZP_07114100.1| hypothetical protein OSCI_4110033 [Oscillatoria sp. PCC 6506]
 gi|300332491|emb|CBN59298.1| hypothetical protein OSCI_4110033 [Oscillatoria sp. PCC 6506]
          Length = 361

 Score = 65.5 bits (158), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 47/193 (24%), Positives = 95/193 (49%), Gaps = 21/193 (10%)

Query: 134 IKVNAHIKRAVVHLHAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRN 193
           + VN + ++AV  L +  DF  A  DL+E  ++DP  A +Y+ RG I  +   Y+  + +
Sbjct: 104 LDVNDYRRQAVEKL-SNEDFQGALKDLNEVIRLDPTDAYAYFLRGTIRYILKDYQGTIED 162

Query: 194 LDKTIALNPNFHVARAQRHFVVHKMIVPGDRERVEQSLKEFRNFVDTHSNVVEACTLFAQ 253
            ++ + L+PN              ++V G R  +   L E++  ++ +S V++     + 
Sbjct: 163 YNQVLKLDPN-------------NILVYGFRGDLYSQLGEYQAAIEDYSQVIKLDPNNSS 209

Query: 254 VLVDQ-------EDFDGAEEYFNRSIRVDPENASLYVHRAMLMLQARGNVDEAIKLIEKA 306
           V +++       +D+ GA E +N+ +++DP N+  Y +R     +  G+   AI    ++
Sbjct: 210 VYLNRGLIRDTIKDYQGAIEDYNQLLKLDPNNSMAYNNRCYTRARGLGDYQGAIADCNES 269

Query: 307 ISIDKSCMFAYET 319
           I +D    +AY +
Sbjct: 270 IRLDPENAYAYAS 282



 Score = 40.0 bits (92), Expect = 2.8,   Method: Compositional matrix adjust.
 Identities = 23/84 (27%), Positives = 44/84 (52%), Gaps = 1/84 (1%)

Query: 458 QKHAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFH 517
           +K +  DF  A  DL+E  ++DP  A +Y+ RG I  +   Y+  + + ++ + L+PN  
Sbjct: 115 EKLSNEDFQGALKDLNEVIRLDPTDAYAYFLRGTIRYILKDYQGTIEDYNQVLKLDPNNI 174

Query: 518 VARAQRHFVWTSTLAELMAFSDEF 541
           +    R  ++ S L E  A  +++
Sbjct: 175 LVYGFRGDLY-SQLGEYQAAIEDY 197



 Score = 39.7 bits (91), Expect = 4.4,   Method: Compositional matrix adjust.
 Identities = 36/150 (24%), Positives = 63/150 (42%), Gaps = 16/150 (10%)

Query: 386 NEKLAIKQLRENNDIIIRPADKGGKTV-VMDKADYTQKMTSILNSNDY--------EIIP 436
           + KLAI  L  N  +         K + ++D  DY ++    L++ D+        E+I 
Sbjct: 75  DSKLAIAPLLPNRQLAGEFQQAARKDIELLDVNDYRRQAVEKLSNEDFQGALKDLNEVIR 134

Query: 437 GDPTKTIEESEKYGNLENESGQKHAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLF 496
            DPT       + G +      ++   D+     D ++  K+DPN    Y  RG +Y   
Sbjct: 135 LDPTDAYAYFLR-GTI------RYILKDYQGTIEDYNQVLKLDPNNILVYGFRGDLYSQL 187

Query: 497 GQYEEALRNLDKTIALNPNFHVARAQRHFV 526
           G+Y+ A+ +  + I L+PN       R  +
Sbjct: 188 GEYQAAIEDYSQVIKLDPNNSSVYLNRGLI 217


>gi|218442020|ref|YP_002380349.1| hypothetical protein PCC7424_5131 [Cyanothece sp. PCC 7424]
 gi|218174748|gb|ACK73481.1| TPR repeat-containing protein [Cyanothece sp. PCC 7424]
          Length = 361

 Score = 65.5 bits (158), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 59/217 (27%), Positives = 100/217 (46%), Gaps = 41/217 (18%)

Query: 117 AIEDLTQLVEDTSVDPKIKVNAHIKRAVVHLHAASDFTKAFADLDEAEKVDPNVADSYYQ 176
           A++DL Q +    ++PK+   A+  R  V       F  AF DL+ A  +DPN A++Y  
Sbjct: 167 AMQDLNQAIR---LNPKM-AEAYSNRGNVRTTIGDTFG-AFKDLNHAIGLDPNSAEAYNN 221

Query: 177 RGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQRHFVVHKMIVPGDRERVEQSL----- 231
           RG  Y   G Y++A ++ ++ I L+P   +A   R  +  +    GD     Q L     
Sbjct: 222 RGVTYARVGDYQKAFQDFNQAIGLDPQLGLAYNNRGVMRREF---GDHAGAIQDLNQALR 278

Query: 232 ------KEFRNFVDTH---SNVVEACTLFAQVLVDQEDFDGAEEYFNRSIRVDPENASLY 282
                 K + N  DTH    N  EA           +D+D       +++R+ P+N ++Y
Sbjct: 279 FDPKLAKAYNNRGDTHRELGNHREAI----------QDYD-------QAVRLIPDNPNIY 321

Query: 283 VHRAMLMLQARGNVDEAIKLIEKAISIDKSCMFAYET 319
            +R ++  Q  G+   AI+   +A++ID   +F  +T
Sbjct: 322 YYRGVVRTQL-GDFQGAIEDYHQAVTIDPK-LFILDT 356



 Score = 63.5 bits (153), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 51/208 (24%), Positives = 98/208 (47%), Gaps = 10/208 (4%)

Query: 150 ASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARA 209
           A +F+ A  D  E  +++PN+ ++Y  RG      G  + A+ + ++ I LNP    A  
Sbjct: 59  AGNFSAAIKDFTEVIRLNPNLPEAYNNRGNARSKLGDNKGAIEDYNQAINLNPKSEQAYY 118

Query: 210 QRHFVVHKMIVPGDRERVEQSLKEFRNFVDTHSNVVEACTLFAQVLVDQEDFDGAEEYFN 269
            R     ++   GD    + +++++   ++ + N  EA         + +D  GA +  N
Sbjct: 119 NRGKARSEL---GDN---KGAIEDYNQALNLNPNSAEAYNNRGISRHELKDHVGAMQDLN 172

Query: 270 RSIRVDPENASLYVHRAMLMLQARGNVDEAIKLIEKAISIDKSCMFAYETLGTIEVQRGR 329
           ++IR++P+ A  Y +R  +     G+   A K +  AI +D +   AY   G    + G 
Sbjct: 173 QAIRLNPKMAEAYSNRGNVRTTI-GDTFGAFKDLNHAIGLDPNSAEAYNNRGVTYARVGD 231

Query: 330 LEEAVKCFNKALPLARDEAELSHIYSLR 357
            ++A + FN+A+ L   + +L   Y+ R
Sbjct: 232 YQKAFQDFNQAIGL---DPQLGLAYNNR 256



 Score = 62.4 bits (150), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 64/267 (23%), Positives = 118/267 (44%), Gaps = 22/267 (8%)

Query: 75  EDYLTAIRHCTEEIESTSSNHTKALARLLRATVYIFTSQSTKAIEDLTQLVEDTSVDPKI 134
           EDY  AI +   + E    N  KA + L           +  AIED  Q +   +++P  
Sbjct: 101 EDYNQAI-NLNPKSEQAYYNRGKARSEL---------GDNKGAIEDYNQAL---NLNPN- 146

Query: 135 KVNAHIKRAVVHLHAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNL 194
              A+  R +   H   D   A  DL++A +++P +A++Y  RG +    G    A ++L
Sbjct: 147 SAEAYNNRGISR-HELKDHVGAMQDLNQAIRLNPKMAEAYSNRGNVRTTIGDTFGAFKDL 205

Query: 195 DKTIALNPNFHVARAQRHFVVHKMIVPGDRERVEQSLKEFRNFVDTHSNVVEACTLFAQV 254
           +  I L+PN   A   R     ++   GD    +++ ++F   +     +  A      +
Sbjct: 206 NHAIGLDPNSAEAYNNRGVTYARV---GD---YQKAFQDFNQAIGLDPQLGLAYNNRGVM 259

Query: 255 LVDQEDFDGAEEYFNRSIRVDPENASLYVHRAMLMLQARGNVDEAIKLIEKAISIDKSCM 314
             +  D  GA +  N+++R DP+ A  Y +R     +  GN  EAI+  ++A+ +     
Sbjct: 260 RREFGDHAGAIQDLNQALRFDPKLAKAYNNRGDTHREL-GNHREAIQDYDQAVRLIPDNP 318

Query: 315 FAYETLGTIEVQRGRLEEAVKCFNKAL 341
             Y   G +  Q G  + A++ +++A+
Sbjct: 319 NIYYYRGVVRTQLGDFQGAIEDYHQAV 345



 Score = 53.5 bits (127), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 54/234 (23%), Positives = 90/234 (38%), Gaps = 41/234 (17%)

Query: 294 GNVDEAIKLIEKAISIDKSCMFAYETLGTIEVQRGRLEEAVKCFNKALPLARDEAELSHI 353
           GN   AIK   + I ++ +   AY   G    + G  + A++ +N+A+ L     +    
Sbjct: 60  GNFSAAIKDFTEVIRLNPNLPEAYNNRGNARSKLGDNKGAIEDYNQAINL---NPKSEQA 116

Query: 354 YSLRDAAIAQMK----VCERYNIKKKVSPRSQNITKNEKLAIKQLRENNDIIIRPADKGG 409
           Y  R  A +++       E YN    ++P S     N  ++  +L+              
Sbjct: 117 YYNRGKARSELGDNKGAIEDYNQALNLNPNSAEAYNNRGISRHELK-------------- 162

Query: 410 KTVVMDKADYTQKMTSILNSNDYEIIPGDPTKTIEESEKYGNLENESGQKHAASDFTKAF 469
                D     Q +   +  N          K  E     GN+    G      D   AF
Sbjct: 163 -----DHVGAMQDLNQAIRLN---------PKMAEAYSNRGNVRTTIG------DTFGAF 202

Query: 470 ADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQR 523
            DL+ A  +DPN A++Y  RG  Y   G Y++A ++ ++ I L+P   +A   R
Sbjct: 203 KDLNHAIGLDPNSAEAYNNRGVTYARVGDYQKAFQDFNQAIGLDPQLGLAYNNR 256



 Score = 47.8 bits (112), Expect = 0.017,   Method: Compositional matrix adjust.
 Identities = 74/304 (24%), Positives = 126/304 (41%), Gaps = 47/304 (15%)

Query: 243 NVVEACTLFAQVL--VDQEDFDGAEEYFNRSIRVDPENASLYVHRAMLMLQAR---GNVD 297
           N VE   LF Q +  +   +F  A + F   IR++P     Y +R      AR   G+  
Sbjct: 44  NSVE--VLFNQGVAKIKAGNFSAAIKDFTEVIRLNPNLPEAYNNRG----NARSKLGDNK 97

Query: 298 EAIKLIEKAISIDKSCMFAYETLGTIEVQRGRLEEAVKCFNKALPLARDEAEL------- 350
            AI+   +AI+++     AY   G    + G  + A++ +N+AL L  + AE        
Sbjct: 98  GAIEDYNQAINLNPKSEQAYYNRGKARSELGDNKGAIEDYNQALNLNPNSAEAYNNRGIS 157

Query: 351 -----SHIYSLRDAAIA---QMKVCERYNIKKKVSPRSQNITKNEKLAIKQLRENNDIII 402
                 H+ +++D   A     K+ E Y+ +  V    +    +   A K L  N+ I +
Sbjct: 158 RHELKDHVGAMQDLNQAIRLNPKMAEAYSNRGNV----RTTIGDTFGAFKDL--NHAIGL 211

Query: 403 RPADKGGKTVVMDKAD-YTQKMTSILNSNDYEIIPGDPTKTIEESEKYGNLENESG-QKH 460
            P          + A+ Y  +  +     DY+    D  + I    + G   N  G  + 
Sbjct: 212 DP----------NSAEAYNNRGVTYARVGDYQKAFQDFNQAIGLDPQLGLAYNNRGVMRR 261

Query: 461 AASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIAL---NPNFH 517
              D   A  DL++A + DP +A +Y  RG  +   G + EA+++ D+ + L   NPN +
Sbjct: 262 EFGDHAGAIQDLNQALRFDPKLAKAYNNRGDTHRELGNHREAIQDYDQAVRLIPDNPNIY 321

Query: 518 VARA 521
             R 
Sbjct: 322 YYRG 325


>gi|119487888|ref|ZP_01621385.1| O-linked GlcNAc transferase [Lyngbya sp. PCC 8106]
 gi|119455464|gb|EAW36602.1| O-linked GlcNAc transferase [Lyngbya sp. PCC 8106]
          Length = 614

 Score = 65.5 bits (158), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 79/369 (21%), Positives = 155/369 (42%), Gaps = 58/369 (15%)

Query: 170 VADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQRHFVVHKMIVPGDRERVEQ 229
           +AD Y ++G+      +Y EAL + +K   +NPN   A   +  ++ ++       R  +
Sbjct: 257 IADDYLKQGEALNNDKRYSEALISFEKAAKMNPNLEEAWYNQGNILVRL------NRYNE 310

Query: 230 SLKEFRNFVDTHSNVVEACTLFAQVLVDQEDFDGAEEYFNRSIRVDPENASLYVHRAMLM 289
           +LK +   V  H    EA      VLV  + +  A E ++ ++ + P +   + +R  L+
Sbjct: 311 ALKAYEKVVQIHPQKYEAWYNRGNVLVKLKRYSEALESYDHALAIQPNDDEAWHNRGALL 370

Query: 290 LQARGNVDEAIKLIEKAISIDKSCMFAYETLGTIEVQRGRLEEAVKCFNKALPLARDEAE 349
            + +   DEA+   +KA+ I  +    +   G +  +  R EEA+  +++A+ +   +A 
Sbjct: 371 RKFK-RYDEALTSYDKALEIQPNKYETWHNRGNVLGKLKRYEEAIISYDRAITI---DAG 426

Query: 350 LSHIYSLRDAAIAQMKVCER----YNIKKKVSPRSQNITKNEKLAIKQLRENNDIIIRPA 405
              ++  R  A+ ++K  E+    +     + P S  +       + QL           
Sbjct: 427 KREVWLNRAVALCKLKRYEQAIASFEQAIGLDPTSPELWNMRASLLHQL----------- 475

Query: 406 DKGGKTVVMDKADYTQKMTSILNS-----NDYEIIPGDP---------TKTIEESEKYGN 451
                        Y++ + S  N+     N YE   G           ++ +E  EK   
Sbjct: 476 -----------GRYSEAIDSFENAIEHQPNCYEAWLGKGSVLVQLKQYSEALETYEKAIT 524

Query: 452 LENESGQ--KHAASDFTK------AFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEAL 503
           ++ E+ +  +H    F K      A A  D+A K+ PN A+++  RG +      Y+EA+
Sbjct: 525 IQPEASEAWRHKGLLFEKLEQYPDAIAAYDQAIKLQPNDAEAWRFRGALLSKLKNYQEAI 584

Query: 504 RNLDKTIAL 512
            +L K I++
Sbjct: 585 SSLGKAISI 593



 Score = 63.5 bits (153), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 47/217 (21%), Positives = 99/217 (45%), Gaps = 29/217 (13%)

Query: 153 FTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQRH 212
           +++A    ++A K++PN+ +++Y +G I     +Y EAL+  +K + ++P  + A   R 
Sbjct: 274 YSEALISFEKAAKMNPNLEEAWYNQGNILVRLNRYNEALKAYEKVVQIHPQKYEAWYNRG 333

Query: 213 FVVHKM---------------IVPGDRE-------------RVEQSLKEFRNFVDTHSNV 244
            V+ K+               I P D E             R +++L  +   ++   N 
Sbjct: 334 NVLVKLKRYSEALESYDHALAIQPNDDEAWHNRGALLRKFKRYDEALTSYDKALEIQPNK 393

Query: 245 VEACTLFAQVLVDQEDFDGAEEYFNRSIRVDPENASLYVHRAMLMLQARGNVDEAIKLIE 304
            E       VL   + ++ A   ++R+I +D     ++++RA+ + + +   ++AI   E
Sbjct: 394 YETWHNRGNVLGKLKRYEEAIISYDRAITIDAGKREVWLNRAVALCKLK-RYEQAIASFE 452

Query: 305 KAISIDKSCMFAYETLGTIEVQRGRLEEAVKCFNKAL 341
           +AI +D +    +    ++  Q GR  EA+  F  A+
Sbjct: 453 QAIGLDPTSPELWNMRASLLHQLGRYSEAIDSFENAI 489



 Score = 59.3 bits (142), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 43/213 (20%), Positives = 100/213 (46%), Gaps = 10/213 (4%)

Query: 153 FTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQRH 212
           + +A    D+A ++ PN  ++++ RG +     +YEEA+ + D+ I ++        +R 
Sbjct: 376 YDEALTSYDKALEIQPNKYETWHNRGNVLGKLKRYEEAIISYDRAITIDA------GKRE 429

Query: 213 FVVHKMIVPGDRERVEQSLKEFRNFVDTHSNVVEACTLFAQVLVDQEDFDGAEEYFNRSI 272
             +++ +     +R EQ++  F   +       E   + A +L     +  A + F  +I
Sbjct: 430 VWLNRAVALCKLKRYEQAIASFEQAIGLDPTSPELWNMRASLLHQLGRYSEAIDSFENAI 489

Query: 273 RVDPENASLYVHRAMLMLQARGNVDEAIKLIEKAISIDKSCMFAYETLGTIEVQRGRLEE 332
              P     ++ +  +++Q +    EA++  EKAI+I      A+   G +  +  +  +
Sbjct: 490 EHQPNCYEAWLGKGSVLVQLK-QYSEALETYEKAITIQPEASEAWRHKGLLFEKLEQYPD 548

Query: 333 AVKCFNKALPLARDEAELSHIYSLRDAAIAQMK 365
           A+  +++A+ L  ++AE    +  R A ++++K
Sbjct: 549 AIAAYDQAIKLQPNDAE---AWRFRGALLSKLK 578



 Score = 49.3 bits (116), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 57/273 (20%), Positives = 113/273 (41%), Gaps = 34/273 (12%)

Query: 268 FNRSIRVDPENASLYVHRAMLMLQARGNVDEAIKLIEKAISIDKSCMFAYETLGTIEVQR 327
           F ++ +++P     + ++  ++++     +EA+K  EK + I      A+   G + V+ 
Sbjct: 281 FEKAAKMNPNLEEAWYNQGNILVRL-NRYNEALKAYEKVVQIHPQKYEAWYNRGNVLVKL 339

Query: 328 GRLEEAVKCFNKALPLARDEAELSHIYSLRDAAIAQMK----VCERYNIKKKVSPRSQNI 383
            R  EA++ ++ AL +  ++ E  H    R A + + K        Y+   ++ P     
Sbjct: 340 KRYSEALESYDHALAIQPNDDEAWHN---RGALLRKFKRYDEALTSYDKALEIQPNKYET 396

Query: 384 TKNEKLAIKQLRENNDIIIR-----PADKGGKTVVMDKA-------DYTQKMTSILNSND 431
             N    + +L+   + II        D G + V +++A        Y Q + S      
Sbjct: 397 WHNRGNVLGKLKRYEEAIISYDRAITIDAGKREVWLNRAVALCKLKRYEQAIASF----- 451

Query: 432 YEIIPGDPTKTIEESEKYGNLENESGQKHAASDFTKAFADLDEAEKVDPNVADSYYQRGQ 491
            + I  DPT     S +  N+   +   H    +++A    + A +  PN  +++  +G 
Sbjct: 452 EQAIGLDPT-----SPELWNMR--ASLLHQLGRYSEAIDSFENAIEHQPNCYEAWLGKGS 504

Query: 492 IYCLFGQYEEALRNLDKTIALNPNFHVARAQRH 524
           +     QY EAL   +K I + P    + A RH
Sbjct: 505 VLVQLKQYSEALETYEKAITIQP--EASEAWRH 535



 Score = 41.2 bits (95), Expect = 1.5,   Method: Compositional matrix adjust.
 Identities = 37/165 (22%), Positives = 65/165 (39%), Gaps = 41/165 (24%)

Query: 147 LHAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHV 206
           LH    +++A    + A +  PN  +++  +G +     QY EAL   +K I + P    
Sbjct: 472 LHQLGRYSEAIDSFENAIEHQPNCYEAWLGKGSVLVQLKQYSEALETYEKAITIQP--EA 529

Query: 207 ARAQRHFVVHKMIVPGDRERVEQSLKEFRNFVDTHSNVVEACTLFAQVLVDQEDFDGAEE 266
           + A RH                                     LF ++    E +  A  
Sbjct: 530 SEAWRH----------------------------------KGLLFEKL----EQYPDAIA 551

Query: 267 YFNRSIRVDPENASLYVHRAMLMLQARGNVDEAIKLIEKAISIDK 311
            ++++I++ P +A  +  R  L+ + + N  EAI  + KAISI K
Sbjct: 552 AYDQAIKLQPNDAEAWRFRGALLSKLK-NYQEAISSLGKAISIQK 595



 Score = 40.8 bits (94), Expect = 1.7,   Method: Compositional matrix adjust.
 Identities = 17/62 (27%), Positives = 36/62 (58%)

Query: 465 FTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQRH 524
           +++A    ++A K++PN+ +++Y +G I     +Y EAL+  +K + ++P  + A   R 
Sbjct: 274 YSEALISFEKAAKMNPNLEEAWYNQGNILVRLNRYNEALKAYEKVVQIHPQKYEAWYNRG 333

Query: 525 FV 526
            V
Sbjct: 334 NV 335


>gi|334118716|ref|ZP_08492804.1| Tetratricopeptide TPR_1 repeat-containing protein [Microcoleus
           vaginatus FGP-2]
 gi|333458946|gb|EGK87561.1| Tetratricopeptide TPR_1 repeat-containing protein [Microcoleus
           vaginatus FGP-2]
          Length = 1483

 Score = 65.5 bits (158), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 51/198 (25%), Positives = 93/198 (46%), Gaps = 8/198 (4%)

Query: 156 AFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQRHFVV 215
           A A   +A K+ P+   +Y   G      G+ E A+R+  + + L PNF   RA    + 
Sbjct: 691 AIAACQQAIKIRPDFIHAYVTLGNALQAEGKNEAAIRSYSQALELRPNFAEVRANIGSMY 750

Query: 216 HKMIVPGDRERVEQSLKEFRNFVDTHSNVVEACTLFAQVLVDQEDFDGAEEYFNRSIRVD 275
            KM       R+E+++  ++  +  + ++  A     +V     +   A   F R+  ++
Sbjct: 751 FKM------GRLEEAIAHYQQAIALNPDLAGAHWNLGKVYQKHGNIQAAIACFKRTSELN 804

Query: 276 PENASLYVHRAML-MLQARGNVDEAIKLIEKAISIDKSCMFAYETLGTIEVQRGRLEEAV 334
           P+      H  +   L ++G  DEAI+  EKAI+I      AY  +G++  Q+G L+ A+
Sbjct: 805 PQLVGADFHFNLGNRLFSQGKRDEAIECYEKAIAIKPDWAEAYGNIGSVRSQQGNLDAAI 864

Query: 335 KCFNKALPLARDEAELSH 352
             + KA+ L + + E+ H
Sbjct: 865 AYYQKAVAL-KPQLEVLH 881



 Score = 62.0 bits (149), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 49/197 (24%), Positives = 93/197 (47%), Gaps = 7/197 (3%)

Query: 155 KAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQRHF- 213
           +A A   +A  ++P++A +++  G++Y   G  + A+    +T  LNP   +  A  HF 
Sbjct: 758 EAIAHYQQAIALNPDLAGAHWNLGKVYQKHGNIQAAIACFKRTSELNP--QLVGADFHFN 815

Query: 214 VVHKMIVPGDRERVEQSLKEFRNFVDTHSNVVEACTLFAQVLVDQEDFDGAEEYFNRSIR 273
           + +++   G R+   ++++ +   +    +  EA      V   Q + D A  Y+ +++ 
Sbjct: 816 LGNRLFSQGKRD---EAIECYEKAIAIKPDWAEAYGNIGSVRSQQGNLDAAIAYYQKAVA 872

Query: 274 VDPENASLYVHRAMLMLQARGNVDEAIKLIEKAISIDKSCMFAYETLGTIEVQRGRLEEA 333
           + P+   L+ + A   LQ +   DEAI      + I       +  LG+     GRLEEA
Sbjct: 873 LKPQLEVLHFNIANSFLQ-QNKYDEAITNYRNTLKIKPDWPEVHANLGSCFSMLGRLEEA 931

Query: 334 VKCFNKALPLARDEAEL 350
           +  + +AL L  D AE+
Sbjct: 932 LASYQQALALKPDWAEV 948



 Score = 53.5 bits (127), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 89/448 (19%), Positives = 172/448 (38%), Gaps = 64/448 (14%)

Query: 79  TAIRHCTEEIESTSSNHTKALARLLRATVYIFTSQSTKAIEDLTQLVEDTSVDPKIKVNA 138
           TA  H  +++E  +   T ++    R  V      S K +    Q++ ++ VD +     
Sbjct: 356 TAENHLRQQVEYINRGCTWSVRA--REWVEWLNIISVKTVRVAEQMITESLVDSEAAQAY 413

Query: 139 HIKRAVVHLHAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTI 198
            +K     L  A D   A  +  +A +++P  A+ + +  ++Y L G++E+A+ + +  I
Sbjct: 414 FVKGN--RLKDAGDLGGAIENYQKALELNPGDAEVHKKLAEVYVLQGEFEKAIASCNLAI 471

Query: 199 ALNPNFHVARAQRHFVVHKMIVPGDRERVEQSLKEFRNFVDTHSNVVEACTLFAQVLVDQ 258
              P+F  A        H       + ++E +++ +   ++      EA      +    
Sbjct: 472 KFKPDFAAAYLTMGNAQHA------QGQLEMAIQAYLQALEIQPKFAEASANLGSMYYKL 525

Query: 259 EDFDGAEEYFNRSIRVDPENASLYVHRAMLMLQARGNVDEAIKLIEKAISIDKSCMFAYE 318
              + A  Y+ +++ ++P+ +S+ +                                   
Sbjct: 526 GQLEQAANYYQKALAINPQLSSVNL----------------------------------- 550

Query: 319 TLGTIEVQRGRLEEAVKCFNKAL---PLARDEAE-LSHIYSLRDAAIAQMKVCERYNIKK 374
            LG++  Q+ +L+ A+ C+ K L   P     AE LS + + +          E      
Sbjct: 551 MLGSVLQQQEKLDAAIACYQKVLQQQPGDASAAEKLSSLLAQKQRETTDSNFIELETESG 610

Query: 375 KVSPRSQNITKNEKLAIKQLRENNDIIIRPADKGGKTVVMDKADYTQKMTSILNSNDYEI 434
           +  P S N  K+E   ++    N  +   P  +   T   + A+ ++++TS LN  D   
Sbjct: 611 EAQPVSVN--KDEGYGLQPSSIN--LPPAPTTETLNTPFTNPAELSEQVTS-LNVPD--- 662

Query: 435 IPGDPTKTIEESEKYGNL-ENESGQKHAASDFTKAFADLDEAEKVDPNVADSYYQRGQIY 493
                    +E E Y  L EN   Q         A A   +A K+ P+   +Y   G   
Sbjct: 663 --SGQVANFKEVEPYKKLAENFLVQ----GKIKDAIAACQQAIKIRPDFIHAYVTLGNAL 716

Query: 494 CLFGQYEEALRNLDKTIALNPNFHVARA 521
              G+ E A+R+  + + L PNF   RA
Sbjct: 717 QAEGKNEAAIRSYSQALELRPNFAEVRA 744


>gi|296125217|ref|YP_003632469.1| hypothetical protein [Brachyspira murdochii DSM 12563]
 gi|296017033|gb|ADG70270.1| TPR repeat-containing protein [Brachyspira murdochii DSM 12563]
          Length = 356

 Score = 65.5 bits (158), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 70/283 (24%), Positives = 124/283 (43%), Gaps = 20/283 (7%)

Query: 63  DLLSKAKRAFEHEDYLTAIRHCTEEIESTSSNHTKALARLL--RATVYIFTSQSTKAIED 120
           DLL  A  AF   DY  +I +  + I      +   +A L   R           +AI D
Sbjct: 6   DLLQLANDAFNCGDYKNSIEYFDKLIF-----YYGDIAELYNNRGLSKSGLRMYEEAIRD 60

Query: 121 LTQLVEDTSVDPKIKVNAHIKRAVVHLHAASDFTKAFADLDEAEKVDPNVADSYYQRGQI 180
             +++   S+DP   V+A+    +V+ H   ++ +A     +A ++D N    Y   G  
Sbjct: 61  FEKVI---SIDPNY-VHAYNNIGLVN-HNLGNYKEAIKYYSKALELDNNCIQVYNNIGLA 115

Query: 181 YCLFGQYEEALRNLDKTIALNPNFHVARAQRHFVVHKMIVPGDRERVEQSLKEFRNFVDT 240
               G YEEA++N  K I ++PN H          +  +V  D    E ++K+F   ++ 
Sbjct: 116 NHNLGNYEEAIKNYIKAIEISPNVHTYN-------NIGLVKNDLGLYEDAIKDFNKVLEL 168

Query: 241 HSNVVEACTLFAQVLVDQEDFDGAEEYFNRSIRVDPENASLYVHRAMLMLQARGNVDEAI 300
             N  +A         + + +D + EYFN+++ +D  +A  Y +   ++    G   EA+
Sbjct: 169 DKNYFKAYYNIGLSKYNLKMYDESIEYFNKALELDNNSAYTY-NNIGIVKHDLGKYKEAL 227

Query: 301 KLIEKAISIDKSCMFAYETLGTIEVQRGRLEEAVKCFNKALPL 343
           +  +KA+ +D +   +Y   G  +V     +EAV  F K + L
Sbjct: 228 EYFDKALELDNNYSKSYYNRGVSKVNLKLYDEAVNDFYKVIEL 270



 Score = 59.3 bits (142), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 74/273 (27%), Positives = 122/273 (44%), Gaps = 30/273 (10%)

Query: 260 DFDGAEEYFNRSIRVDPENASLYVHRAMLMLQARGNVDEAIKLIEKAISIDKSCMFAYET 319
           D+  + EYF++ I    + A LY +R +     R   +EAI+  EK ISID + + AY  
Sbjct: 19  DYKNSIEYFDKLIFYYGDIAELYNNRGLSKSGLRM-YEEAIRDFEKVISIDPNYVHAYNN 77

Query: 320 LGTIEVQRGRLEEAVKCFNKALPLARDEAELSHIYSLRDAAIAQMKVCERYNIKK-KVSP 378
           +G +    G  +EA+K ++KAL L  +  ++ +   L +  +   +   +  IK  ++SP
Sbjct: 78  IGLVNHNLGNYKEAIKYYSKALELDNNCIQVYNNIGLANHNLGNYEEAIKNYIKAIEISP 137

Query: 379 RSQNITKNEKLAIKQLRENNDI-IIRPADKGGKTVVMDKADYTQKMTSILNSNDYEIIPG 437
                T N    +K     ND+ +   A K    V+    +Y +   +I        +  
Sbjct: 138 NVH--TYNNIGLVK-----NDLGLYEDAIKDFNKVLELDKNYFKAYYNIG-------LSK 183

Query: 438 DPTKTIEESEKYGN----LENESGQ--------KHAASDFTKAFADLDEAEKVDPNVADS 485
              K  +ES +Y N    L+N S          KH    + +A    D+A ++D N + S
Sbjct: 184 YNLKMYDESIEYFNKALELDNNSAYTYNNIGIVKHDLGKYKEALEYFDKALELDNNYSKS 243

Query: 486 YYQRGQIYCLFGQYEEALRNLDKTIALNP-NFH 517
           YY RG        Y+EA+ +  K I L P NF+
Sbjct: 244 YYNRGVSKVNLKLYDEAVNDFYKVIELEPQNFN 276


>gi|390438504|ref|ZP_10226967.1| Similar to tr|Q3M7C2|Q3M7C2_ANAVT Protein prenyltransferase
           (modular protein) [Microcystis sp. T1-4]
 gi|389838086|emb|CCI31091.1| Similar to tr|Q3M7C2|Q3M7C2_ANAVT Protein prenyltransferase
           (modular protein) [Microcystis sp. T1-4]
          Length = 1080

 Score = 65.5 bits (158), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 70/358 (19%), Positives = 148/358 (41%), Gaps = 16/358 (4%)

Query: 174 YYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQRHFVVHKMIVPGDRERVEQSLKE 233
           ++Q+G    + G +  A+ + D+ + + P+FH+A   R F +  +       R E+++  
Sbjct: 153 WFQQGNQKYMNGDFLGAIASYDRALEIKPDFHLAWLIRGFALDNL------GRFEKAIAS 206

Query: 234 FRNFVDTHSNVVEACTLFAQVLVDQEDFDGAEEYFNRSIRVDPENASLYVHRAMLMLQAR 293
           +   ++   ++ EA       L +   F  A   ++R++   P++   + +R    L   
Sbjct: 207 WDRALEIKPDLHEAWNNRGNALGNLGRFGQAIASYDRALEFKPDDHLAWNNRGS-ALYYL 265

Query: 294 GNVDEAIKLIEKAISIDKSCMFAYETLGTIEVQRGRLEEAVKCFNKALPLARDEAELSHI 353
           G  ++AI   ++A+ I      A+   G      GR E+A+  +++AL +  D  +    
Sbjct: 266 GRFEQAIASYDRALEIKPDKHEAWYGRGVALGNLGRSEQAIASYDRALEIKPDYHD---A 322

Query: 354 YSLRDAAIAQMKVCER----YNIKKKVSPRSQNITKNEKLAIKQLRENNDIIIRPADKGG 409
           ++ R  A+A +   E+    ++   ++ P       N  + +  L    + I    D+  
Sbjct: 323 WNYRGIALADLGRFEQAIASFDQALEIKPDFHLAWYNRGIELGNLGRLEEAIAS-YDRAL 381

Query: 410 KTVVMDKADYTQKMTSILNSNDYEIIPGDPTKTIEESEKYGNLENESGQKHA-ASDFTKA 468
           +        +  +  ++ N   +E         +E    Y    N  G   A    F +A
Sbjct: 382 EIKPDLHQAWYGRGNALKNLGRFEEAIASYDHALEIKPDYHEAWNNRGNALADLGRFAEA 441

Query: 469 FADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQRHFV 526
            A  D A +  P+  +++  RG      G+ EEA+ + D+ + + P+FH A   R + 
Sbjct: 442 IASYDRALEFKPDDHEAWNNRGFALGNLGRLEEAIASYDRALEIKPDFHEAWGNRGWA 499



 Score = 62.0 bits (149), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 43/194 (22%), Positives = 90/194 (46%), Gaps = 7/194 (3%)

Query: 153 FTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQRH 212
           F KA A  D A ++ P++ +++  RG      G++ +A+ + D+ +   P+ H+A   R 
Sbjct: 200 FEKAIASWDRALEIKPDLHEAWNNRGNALGNLGRFGQAIASYDRALEFKPDDHLAWNNRG 259

Query: 213 FVVHKMIVPGDRERVEQSLKEFRNFVDTHSNVVEACTLFAQVLVDQEDFDGAEEYFNRSI 272
             ++ +       R EQ++  +   ++   +  EA       L +    + A   ++R++
Sbjct: 260 SALYYL------GRFEQAIASYDRALEIKPDKHEAWYGRGVALGNLGRSEQAIASYDRAL 313

Query: 273 RVDPENASLYVHRAMLMLQARGNVDEAIKLIEKAISIDKSCMFAYETLGTIEVQRGRLEE 332
            + P+    + +R  + L   G  ++AI   ++A+ I      A+   G      GRLEE
Sbjct: 314 EIKPDYHDAWNYRG-IALADLGRFEQAIASFDQALEIKPDFHLAWYNRGIELGNLGRLEE 372

Query: 333 AVKCFNKALPLARD 346
           A+  +++AL +  D
Sbjct: 373 AIASYDRALEIKPD 386



 Score = 62.0 bits (149), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 43/192 (22%), Positives = 90/192 (46%), Gaps = 7/192 (3%)

Query: 155 KAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQRHFV 214
           +A A  D A ++ P+  D++  RG      G++E+A+ + D+ + + P+FH+A   R   
Sbjct: 304 QAIASYDRALEIKPDYHDAWNYRGIALADLGRFEQAIASFDQALEIKPDFHLAWYNRGIE 363

Query: 215 VHKMIVPGDRERVEQSLKEFRNFVDTHSNVVEACTLFAQVLVDQEDFDGAEEYFNRSIRV 274
           +      G+  R+E+++  +   ++   ++ +A       L +   F+ A   ++ ++ +
Sbjct: 364 L------GNLGRLEEAIASYDRALEIKPDLHQAWYGRGNALKNLGRFEEAIASYDHALEI 417

Query: 275 DPENASLYVHRAMLMLQARGNVDEAIKLIEKAISIDKSCMFAYETLGTIEVQRGRLEEAV 334
            P+    + +R    L   G   EAI   ++A+        A+   G      GRLEEA+
Sbjct: 418 KPDYHEAWNNRGN-ALADLGRFAEAIASYDRALEFKPDDHEAWNNRGFALGNLGRLEEAI 476

Query: 335 KCFNKALPLARD 346
             +++AL +  D
Sbjct: 477 ASYDRALEIKPD 488



 Score = 60.8 bits (146), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 55/255 (21%), Positives = 106/255 (41%), Gaps = 14/255 (5%)

Query: 147 LHAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHV 206
           L+    F +A A  D A ++ P+  +++Y RG      G+ E+A+ + D+ + + P++H 
Sbjct: 262 LYYLGRFEQAIASYDRALEIKPDKHEAWYGRGVALGNLGRSEQAIASYDRALEIKPDYHD 321

Query: 207 ARAQRHFVVHKMIVPGDRERVEQSLKEFRNFVDTHSNVVEACTLFAQVLVDQEDFDGAEE 266
           A   R   +       D  R EQ++  F   ++   +   A       L +    + A  
Sbjct: 322 AWNYRGIAL------ADLGRFEQAIASFDQALEIKPDFHLAWYNRGIELGNLGRLEEAIA 375

Query: 267 YFNRSIRVDPENASLYVHRAMLMLQARGNVDEAIKLIEKAISIDKSCMFAYETLGTIEVQ 326
            ++R++ + P+    +  R    L+  G  +EAI   + A+ I      A+   G     
Sbjct: 376 SYDRALEIKPDLHQAWYGRGN-ALKNLGRFEEAIASYDHALEIKPDYHEAWNNRGNALAD 434

Query: 327 RGRLEEAVKCFNKALPLARDEAELSHIYSLRDAAIAQMKVCER----YNIKKKVSPRSQN 382
            GR  EA+  +++AL    D+ E    ++ R  A+  +   E     Y+   ++ P    
Sbjct: 435 LGRFAEAIASYDRALEFKPDDHE---AWNNRGFALGNLGRLEEAIASYDRALEIKPDFHE 491

Query: 383 ITKNEKLAIKQLREN 397
              N   A+  L +N
Sbjct: 492 AWGNRGWAVCSLSKN 506



 Score = 53.9 bits (128), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 63/297 (21%), Positives = 120/297 (40%), Gaps = 38/297 (12%)

Query: 260 DFDGAEEYFNRSIRVDPENASLYVHRAMLMLQARGNVDEAIKLIEKAISIDKSCMFAYET 319
           DF GA   ++R++ + P+    ++ R    L   G  ++AI   ++A+ I      A+  
Sbjct: 165 DFLGAIASYDRALEIKPDFHLAWLIRGF-ALDNLGRFEKAIASWDRALEIKPDLHEAWNN 223

Query: 320 LGTIEVQRGRLEEAVKCFNKALPLARDEAELSHI-YSLRDAAIAQMKVCER----YNIKK 374
            G      GR  +A+  +++AL    D+    H+ ++ R +A+  +   E+    Y+   
Sbjct: 224 RGNALGNLGRFGQAIASYDRALEFKPDD----HLAWNNRGSALYYLGRFEQAIASYDRAL 279

Query: 375 KVSPRSQNITKNEKLAIKQLRENNDII--------IRP----ADKGGKTVVMDKADYTQK 422
           ++ P          +A+  L  +   I        I+P    A       + D   + Q 
Sbjct: 280 EIKPDKHEAWYGRGVALGNLGRSEQAIASYDRALEIKPDYHDAWNYRGIALADLGRFEQA 339

Query: 423 MTSILNSNDYEIIPGDPTKTIEESEKYGNLENESGQKHAASDFTKAFADLDEAEKVDPNV 482
           + S       EI P           + GNL              +A A  D A ++ P++
Sbjct: 340 IASF--DQALEIKPDFHLAWYNRGIELGNL----------GRLEEAIASYDRALEIKPDL 387

Query: 483 ADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQRHFVWTSTLAELMAFSD 539
             ++Y RG      G++EEA+ + D  + + P++H A   R     + LA+L  F++
Sbjct: 388 HQAWYGRGNALKNLGRFEEAIASYDHALEIKPDYHEAWNNR----GNALADLGRFAE 440


>gi|237755427|ref|ZP_04584053.1| putative TPR repeat-containing protein [Sulfurihydrogenibium
           yellowstonense SS-5]
 gi|237692427|gb|EEP61409.1| putative TPR repeat-containing protein [Sulfurihydrogenibium
           yellowstonense SS-5]
          Length = 329

 Score = 65.5 bits (158), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 65/251 (25%), Positives = 118/251 (47%), Gaps = 20/251 (7%)

Query: 102 LLRATVYIFTSQSTKAIEDLTQLVEDTSVDPKIKVNAHIKRAVVHLHAAS--DFTKAFAD 159
           LL   +Y + +++ +    +T L E   +DP+I    H  R  V  H  +      A  +
Sbjct: 10  LLNKAIYHYENENFEMA--ITLLDEAILLDPEIP-EVHYWRGKVATHDLNQESLEVAIVE 66

Query: 160 LDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQRHFVVHKMI 219
           L EA ++ P+ AD+Y++RG++Y   G++EEA ++L+K I LNP    A +    +    +
Sbjct: 67  LSEAIRLKPDYADAYFERGKVYIQKGEFEEAKKDLEKAIQLNPKLKEAYS---LLAQIEL 123

Query: 220 VPGDRERVEQSLKEFRNFVDTHSNVVEACTLFAQVLVDQEDFDGAEEYFNRSIRVDPENA 279
           + G+ E+  + L++    V              ++  +   +  A E FN++I  +    
Sbjct: 124 ISGNDEKAMKYLEK----VSHQEGDDRYYYSLGKIFYNAGKYQLAIEQFNKTIEKNKYFV 179

Query: 280 SLYVHRAMLMLQARGNVDEAIKLIEKAISI--DKSCMFA-----YETLGTIEVQRGRLEE 332
             YV++A   L   GN  EAI+ ++KAI +  ++   F      Y  +G  + + G   E
Sbjct: 180 DAYVYKAH-ALANLGNYQEAIENLKKAIILVPEEISYFIDMAKYYFEIGKQKAKEGNNIE 238

Query: 333 AVKCFNKALPL 343
           A + F K L +
Sbjct: 239 AAENFIKGLQI 249



 Score = 51.6 bits (122), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 22/52 (42%), Positives = 36/52 (69%)

Query: 468 AFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVA 519
           A  +L EA ++ P+ AD+Y++RG++Y   G++EEA ++L+K I LNP    A
Sbjct: 63  AIVELSEAIRLKPDYADAYFERGKVYIQKGEFEEAKKDLEKAIQLNPKLKEA 114


>gi|163847351|ref|YP_001635395.1| hypothetical protein Caur_1789 [Chloroflexus aurantiacus J-10-fl]
 gi|222525196|ref|YP_002569667.1| hypothetical protein Chy400_1936 [Chloroflexus sp. Y-400-fl]
 gi|163668640|gb|ABY35006.1| TPR repeat-containing protein [Chloroflexus aurantiacus J-10-fl]
 gi|222449075|gb|ACM53341.1| TPR repeat-containing protein [Chloroflexus sp. Y-400-fl]
          Length = 450

 Score = 65.5 bits (158), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 78/368 (21%), Positives = 149/368 (40%), Gaps = 64/368 (17%)

Query: 155 KAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQRHFV 214
           +A  D D A  ++PN+A  + +RG+      Q++EA+    + +A++P +  A   R   
Sbjct: 115 EALVDFDAALALNPNLAWIHAERGESLRALNQHQEAIEAFSRALAIDPAYPWALGHRGIT 174

Query: 215 VHKM---------------------IVPGDRERVEQSLKEFRNFVDTHSNVVEACTLFAQ 253
             +M                      +  +R    +   +F   +   S  +E  + +A 
Sbjct: 175 YREMRDFPAAIADFDAAIALQGNMAWLYAERGETRRLADDFEGALADLSRALELDSAYAW 234

Query: 254 VLVDQ-------EDFDGAEEYFNRSIRVDPENASLYVHRAMLMLQARGNVDEAIKLIEKA 306
               +        D + A   FNR++ +DP    +Y  R +L        DEAI    +A
Sbjct: 235 AFGSRGAAFRAVGDLNAALADFNRALELDPGYTWVYFQRGLLHRNT-NRTDEAIADFSRA 293

Query: 307 ISIDKSCMFAYETLGTIEVQRGRLEEAVKCFNKALPLARDEAELSHIYSLRDAAIAQM-K 365
           I ++ + + A    G +   + R EEA++ FN+ + L  D     H ++L   +  Q+ +
Sbjct: 294 IELEPNYIAALAERGELFRLQRRYEEALRDFNRTIELQPD-----HAWAL--GSRGQVYR 346

Query: 366 VCERYNIKKKVSPRSQNITKNEKLAIKQLRENNDIIIRPADKGGKTVVMDKADYTQKMTS 425
           V  RY+              N  LA+K      D++   A++G    ++   +Y + +  
Sbjct: 347 VLARYD--------EALADFNRALALKP-----DMVWVIAERGETHRLLR--NYNEALED 391

Query: 426 ILNSNDYEIIPGDPTKTIEESEKYGNLENESGQKHAASDFTKAFADLDEAEKVDPNVADS 485
              +   E+ P D          Y +L+           + +A+ DL  A ++DPN A +
Sbjct: 392 F--NRALELSPNDSWVLSRRGATYQSLKI----------YEEAYIDLTRAIEIDPNNAWA 439

Query: 486 YYQRGQIY 493
           + QRG ++
Sbjct: 440 WAQRGSLF 447



 Score = 63.5 bits (153), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 54/226 (23%), Positives = 102/226 (45%), Gaps = 24/226 (10%)

Query: 150 ASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARA 209
           A DF  A ADL  A ++D   A ++  RG  +   G    AL + ++ + L+P +     
Sbjct: 212 ADDFEGALADLSRALELDSAYAWAFGSRGAAFRAVGDLNAALADFNRALELDPGYTWVYF 271

Query: 210 QRHFVVHKMIVPGDRERVEQSLKEFRNFVDTHSNVVEACTLFAQVLVDQEDFDGAEEYFN 269
           QR  ++H+     +  R ++++ +F   ++   N + A     ++   Q  ++ A   FN
Sbjct: 272 QRG-LLHR-----NTNRTDEAIADFSRAIELEPNYIAALAERGELFRLQRRYEEALRDFN 325

Query: 270 RSIRVDPENASLYVHRAMLMLQARGNV-------DEAIKLIEKAISIDKSCMFAYETLGT 322
           R+I + P++A          L +RG V       DEA+    +A+++    ++     G 
Sbjct: 326 RTIELQPDHA--------WALGSRGQVYRVLARYDEALADFNRALALKPDMVWVIAERGE 377

Query: 323 IEVQRGRLEEAVKCFNKALPLARDEAELSHIYSLRDAAIAQMKVCE 368
                    EA++ FN+AL L+ ++   S + S R A    +K+ E
Sbjct: 378 THRLLRNYNEALEDFNRALELSPND---SWVLSRRGATYQSLKIYE 420



 Score = 62.0 bits (149), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 86/385 (22%), Positives = 155/385 (40%), Gaps = 74/385 (19%)

Query: 156 AFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQRHFVV 215
           A AD + A  +D N A +Y+QRGQ+    G+ EE+L +L +   L P+     A+R    
Sbjct: 14  ALADFNRAIAIDENYAWAYFQRGQVLRELGRLEESLDDLTRACDLEPDDPAYHAERG--- 70

Query: 216 HKMIVPGDRERVEQSLKEFRNFVDTHSNVVEACTLFAQVLVDQEDFDGAEEYFNRSIRVD 275
                        ++L+  R     H   +EA                    F+R+I + 
Sbjct: 71  -------------ETLRMLRR----HEAAIEA--------------------FSRAIALR 93

Query: 276 PENASLYVHRAMLMLQARGNVDEAIKLIEKAISIDKSCMFAYETLGTIEVQRG------- 328
           PE            L +RG V  A++   +A+    + +     L  I  +RG       
Sbjct: 94  PEYP--------WALGSRGQVWRALRRHHEALVDFDAALALNPNLAWIHAERGESLRALN 145

Query: 329 RLEEAVKCFNKAL------PLARDEAELSHIYSLRDAAIAQMKVCERYNIKKKVSPRSQN 382
           + +EA++ F++AL      P A     +++   +RD   A         ++  ++     
Sbjct: 146 QHQEAIEAFSRALAIDPAYPWALGHRGITY-REMRDFPAAIADFDAAIALQGNMAWLYAE 204

Query: 383 ITKNEKLAIKQLRENNDIIIRPADKGGKTVVMDKA---DYTQKMTSILNSNDYEIIPGDP 439
             +  +LA       +D     AD   + + +D A    +  +  +     D      D 
Sbjct: 205 RGETRRLA-------DDFEGALADLS-RALELDSAYAWAFGSRGAAFRAVGDLNAALADF 256

Query: 440 TKTIEESEKYGNLENESGQKHAASDFT-KAFADLDEAEKVDPNVADSYYQRGQIYCLFGQ 498
            + +E    Y  +  + G  H  ++ T +A AD   A +++PN   +  +RG+++ L  +
Sbjct: 257 NRALELDPGYTWVYFQRGLLHRNTNRTDEAIADFSRAIELEPNYIAALAERGELFRLQRR 316

Query: 499 YEEALRNLDKTIALNPNFHVARAQR 523
           YEEALR+ ++TI L P+   A   R
Sbjct: 317 YEEALRDFNRTIELQPDHAWALGSR 341



 Score = 53.9 bits (128), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 63/308 (20%), Positives = 131/308 (42%), Gaps = 18/308 (5%)

Query: 225 ERVEQSLKEFRNFVDTHSNVVEACTLFAQVLVDQEDFDGAEEYFNRSIRVDPENASLYVH 284
           +R E +L +F   +    N   A     QVL +    + + +   R+  ++P++ + +  
Sbjct: 9   DRREAALADFNRAIAIDENYAWAYFQRGQVLRELGRLEESLDDLTRACDLEPDDPAYHAE 68

Query: 285 RAMLMLQARGNVDEAIKLIEKAISIDKSCMFAYETLGTIEVQRGRLEEAVKCFNKALPLA 344
           R   +   R + + AI+   +AI++     +A  + G +     R  EA+  F+ AL L 
Sbjct: 69  RGETLRMLRRH-EAAIEAFSRAIALRPEYPWALGSRGQVWRALRRHHEALVDFDAALAL- 126

Query: 345 RDEAELSHIYSLRDAAIAQM----KVCERYNIKKKVSPRSQNITKNEKLAIKQLRE---- 396
                L+ I++ R  ++  +    +  E ++    + P       +  +  +++R+    
Sbjct: 127 --NPNLAWIHAERGESLRALNQHQEAIEAFSRALAIDPAYPWALGHRGITYREMRDFPAA 184

Query: 397 NNDIIIRPADKGGKTVVMDKADYTQKMTSILNSNDYEIIPGDPTKTIEESEKYGNLENES 456
             D     A +G    +  +   T+++     ++D+E    D ++ +E    Y       
Sbjct: 185 IADFDAAIALQGNMAWLYAERGETRRL-----ADDFEGALADLSRALELDSAYAWAFGSR 239

Query: 457 GQK-HAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPN 515
           G    A  D   A AD + A ++DP     Y+QRG ++    + +EA+ +  + I L PN
Sbjct: 240 GAAFRAVGDLNAALADFNRALELDPGYTWVYFQRGLLHRNTNRTDEAIADFSRAIELEPN 299

Query: 516 FHVARAQR 523
           +  A A+R
Sbjct: 300 YIAALAER 307



 Score = 52.8 bits (125), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 53/241 (21%), Positives = 98/241 (40%), Gaps = 46/241 (19%)

Query: 117 AIEDLTQLVE-DTSVDPKIKVNAHIKRAVVHLHAASDFTKAFADLDEAEKVDPNVADSYY 175
           A+ DL++ +E D++            RAV       D   A AD + A ++DP     Y+
Sbjct: 218 ALADLSRALELDSAYAWAFGSRGAAFRAV------GDLNAALADFNRALELDPGYTWVYF 271

Query: 176 QRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQRHFVVHKMIVPGDRERVEQSLKEFR 235
           QRG ++    + +EA+ +  + I L PN+  A A+R  +         + R E++L++F 
Sbjct: 272 QRGLLHRNTNRTDEAIADFSRAIELEPNYIAALAERGELFRL------QRRYEEALRDFN 325

Query: 236 NFVDTHSNVVEACTLFAQVLVDQEDFDGAEEYFNRSIRVDPENASLYVHRA--------- 286
             ++   +   A     QV      +D A   FNR++ + P+   +   R          
Sbjct: 326 RTIELQPDHAWALGSRGQVYRVLARYDEALADFNRALALKPDMVWVIAERGETHRLLRNY 385

Query: 287 -----------------MLMLQARGNVDEAIKLIE-------KAISIDKSCMFAYETLGT 322
                              +L  RG   +++K+ E       +AI ID +  +A+   G+
Sbjct: 386 NEALEDFNRALELSPNDSWVLSRRGATYQSLKIYEEAYIDLTRAIEIDPNNAWAWAQRGS 445

Query: 323 I 323
           +
Sbjct: 446 L 446


>gi|445062771|ref|ZP_21375099.1| TPR domain-containing protein, partial [Brachyspira hampsonii
           30599]
 gi|444505847|gb|ELV06281.1| TPR domain-containing protein, partial [Brachyspira hampsonii
           30599]
          Length = 430

 Score = 65.5 bits (158), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 52/226 (23%), Positives = 106/226 (46%), Gaps = 12/226 (5%)

Query: 116 KAIEDLTQLVEDTSVDPKIKVNAHIKRAVVHLHAASDFTKAFADLDEAEKVDPNVADSYY 175
           +A+ED  + +E    D  +  N  + +  +HL     + +A  D D+A  +    ++ YY
Sbjct: 103 EALEDYNKAIELEKNDAYLYNNRALLKGRMHL-----YKEAIEDFDKAISLYDGDSEFYY 157

Query: 176 QRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQRHFVVHKMIVPGDRERVEQSLKEFR 235
            RG       + +EAL+ ++K I L+ N+  A  +R  + ++          + ++K+F+
Sbjct: 158 YRGLTSSYLNELDEALKYINKAIELDTNYINAYNERGLIYYR------NSDYDSAIKDFK 211

Query: 236 NFVDTHSNVVEACTLFAQVLVDQEDFDGAEEYFNRSIRVDPENASLYVHRAMLMLQARGN 295
             ++  +  V A    A      E+++ A +Y+ R I ++P     + +RA+  ++    
Sbjct: 212 KVIELDNENVYANYHLALSYDALEEYETALKYYTRVIELEPNTPDAFYNRALAEIEMEL- 270

Query: 296 VDEAIKLIEKAISIDKSCMFAYETLGTIEVQRGRLEEAVKCFNKAL 341
             EAI+   K I ID + + AY  +G         ++AV+C+ K +
Sbjct: 271 YHEAIEDFYKVIDIDSTIIDAYFNIGICYDSLKDYQKAVECYTKVI 316



 Score = 51.2 bits (121), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 51/227 (22%), Positives = 102/227 (44%), Gaps = 8/227 (3%)

Query: 165 KVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQRHFVVHKMIVPGDR 224
           +++ ++  SYY R         YEEAL + +K I LNP    +   R  + ++M      
Sbjct: 45  EMNDDIYYSYYNRALAEESLQLYEEALEDYNKAIELNPEDTYSYNNRGLIKNEM------ 98

Query: 225 ERVEQSLKEFRNFVDTHSNVVEACTLFAQVLVDQEDFDGAEEYFNRSIRVDPENASLYVH 284
           +  +++L+++   ++   N        A +      +  A E F+++I +   ++  Y +
Sbjct: 99  QMYDEALEDYNKAIELEKNDAYLYNNRALLKGRMHLYKEAIEDFDKAISLYDGDSEFYYY 158

Query: 285 RAMLMLQARGNVDEAIKLIEKAISIDKSCMFAYETLGTIEVQRGRLEEAVKCFNKALPLA 344
           R  L       +DEA+K I KAI +D + + AY   G I  +    + A+K F K + L 
Sbjct: 159 RG-LTSSYLNELDEALKYINKAIELDTNYINAYNERGLIYYRNSDYDSAIKDFKKVIELD 217

Query: 345 RDEAELSHIYSLRDAAIAQMKVCERYNIKK-KVSPRSQNITKNEKLA 390
            +    ++  +L   A+ + +   +Y  +  ++ P + +   N  LA
Sbjct: 218 NENVYANYHLALSYDALEEYETALKYYTRVIELEPNTPDAFYNRALA 264


>gi|429122838|ref|ZP_19183371.1| hypothetical protein A966_00870 [Brachyspira hampsonii 30446]
 gi|426281293|gb|EKV58292.1| hypothetical protein A966_00870 [Brachyspira hampsonii 30446]
          Length = 800

 Score = 65.1 bits (157), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 51/226 (22%), Positives = 106/226 (46%), Gaps = 12/226 (5%)

Query: 116 KAIEDLTQLVEDTSVDPKIKVNAHIKRAVVHLHAASDFTKAFADLDEAEKVDPNVADSYY 175
           +A+ED  + +E    D  +  N  + +  +HL     + +A  D D+A  +    ++ YY
Sbjct: 374 EALEDYNKAIELEKDDAYLYNNRALLKGRMHL-----YKEAIEDFDKAISIYEGDSEFYY 428

Query: 176 QRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQRHFVVHKMIVPGDRERVEQSLKEFR 235
            RG       + +EAL+ ++K I L+P +  A  +R  + ++            ++++F+
Sbjct: 429 YRGLTSSYLNELDEALKYINKAIELDPKYINAYNERGLINYR------NSNYNSAIEDFK 482

Query: 236 NFVDTHSNVVEACTLFAQVLVDQEDFDGAEEYFNRSIRVDPENASLYVHRAMLMLQARGN 295
           N ++  +  V A    A      E+++ A +Y+ R I ++P     + +RA+  ++    
Sbjct: 483 NVIELDNENVYANYHLALSYDALEEYETALKYYARVIELEPNTPDAFYNRALAEIEMEL- 541

Query: 296 VDEAIKLIEKAISIDKSCMFAYETLGTIEVQRGRLEEAVKCFNKAL 341
             EAI+   K I ID + + AY  +G         ++A++C+ K +
Sbjct: 542 YHEAIEDFYKVIDIDSNIIDAYFNIGICYDYLKEYQKAIECYTKVI 587



 Score = 57.0 bits (136), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 97/508 (19%), Positives = 202/508 (39%), Gaps = 97/508 (19%)

Query: 64  LLSKAKRAFEHEDYLTAIRHCTEEIESTSSNHTKALARLLRATVYIFTSQSTKAIEDLTQ 123
           L      AF  +DY  +I +  E I+     + K +     +   I++S      ++  +
Sbjct: 12  LFDLGHHAFISKDYEKSIEYLNEVIDI----YNKYIIAYSDSEFIIYSSSYDNEDDEEGK 67

Query: 124 LVEDTSVDP--KIKVNAHIKRAVVHLHAASDFTKAFADLDEAEKVDPNVADSYYQRGQIY 181
            + D  ++      V+A+  R + + +   ++ +A  D D+  ++ P  +++YY RG   
Sbjct: 68  NISDEEINNTHDTLVDAYYNRGLSYFNL-KNYEEAIKDFDKVIELSPEKSNAYYNRGHSK 126

Query: 182 CLFGQYEEALRNLDKTIALNPN------------FHVARAQ---RHFVVHKMI------- 219
              G+YEE +++  K +  N +            F+  + Q   ++F +  ++       
Sbjct: 127 SYLGRYEEGIKDFKKVLEFNEDDAEAIYYIGLGYFYCGKYQEAIKNFDIALLLDDEIDDA 186

Query: 220 --VPGDRERV----EQSLKEFRNFV-----DTHSNVVEACTLFAQVLVDQEDFDGAEEYF 268
               G  +R     E++L +F   V     D+ S   +A T F   L     ++ A   F
Sbjct: 187 YYYRGHSKRYLNMYEEALSDFNKIVELRYDDSDSYYSKALTEFFLGL-----YEDAINDF 241

Query: 269 NRSIRVDPENASLYVHRAML---MLQARGNVDEAIKLIEKAISIDKSCMFAYETLGTIEV 325
           N++I +D   ++ Y  R +    +   +  +D+  K +E A   D++ +  Y  +G +E 
Sbjct: 242 NKAIELDNHFSNAYYFRGLTKNSLELYKDAMDDYKKALEYAD--DENIINIYNDMGLLEY 299

Query: 326 QRGRLEEAVKCFNKALPLARDEAELSHIYSLRDAAIAQMKV------CERYNIKKKVSPR 379
           + G   +A+  + K + +  D       YS  + A+A+  +       E YN   +++P 
Sbjct: 300 KLGNYRDAINYYTKMIEINDD-----IYYSYYNRALAEESLQLYEDALEDYNKAIELNPE 354

Query: 380 SQNITKNEKLAIKQLRENNDIIIRPADKGGKTVVMDKAD-YTQKMTSILNSNDYEIIPGD 438
                 N  L   +++    +     +   K + ++K D Y     ++L           
Sbjct: 355 DTYSYNNRGLIKNEMQ----MYDEALEDYNKAIELEKDDAYLYNNRALL----------- 399

Query: 439 PTKTIEESEKYGNLENESGQKHAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQ 498
                             G+ H    + +A  D D+A  +    ++ YY RG       +
Sbjct: 400 -----------------KGRMHL---YKEAIEDFDKAISIYEGDSEFYYYRGLTSSYLNE 439

Query: 499 YEEALRNLDKTIALNPNFHVARAQRHFV 526
            +EAL+ ++K I L+P +  A  +R  +
Sbjct: 440 LDEALKYINKAIELDPKYINAYNERGLI 467



 Score = 46.6 bits (109), Expect = 0.030,   Method: Compositional matrix adjust.
 Identities = 82/374 (21%), Positives = 150/374 (40%), Gaps = 26/374 (6%)

Query: 153 FTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIAL---NPNFHVARA 209
           + +A  + D A  +D  + D+YY RG        YEEAL + +K + L   + + + ++A
Sbjct: 166 YQEAIKNFDIALLLDDEIDDAYYYRGHSKRYLNMYEEALSDFNKIVELRYDDSDSYYSKA 225

Query: 210 QRHFVVHKMIVPGDRERVEQSLKEFRNFVDTHSNVVEACTLFAQVLVDQEDFDGAEEYFN 269
              F +            E ++ +F   ++  ++   A           E +  A + + 
Sbjct: 226 LTEFFLG---------LYEDAINDFNKAIELDNHFSNAYYFRGLTKNSLELYKDAMDDYK 276

Query: 270 RSIRVDPENASLYVHRAMLMLQAR-GNVDEAIKLIEKAISIDKSCMFAYETLGTIEVQRG 328
           +++    +   + ++  M +L+ + GN  +AI    K I I+    ++Y      E    
Sbjct: 277 KALEYADDENIINIYNDMGLLEYKLGNYRDAINYYTKMIEINDDIYYSYYNRALAEESLQ 336

Query: 329 RLEEAVKCFNKALPLARDEAELSHIYSLRDAAIAQMKV----CERYNIKKKVSPRSQNIT 384
             E+A++ +NKA+ L     E ++ Y+ R     +M++     E YN   ++      + 
Sbjct: 337 LYEDALEDYNKAIEL---NPEDTYSYNNRGLIKNEMQMYDEALEDYNKAIELEKDDAYLY 393

Query: 385 KNEKLAIKQLRENNDIIIRPADKGGKTVVMDKADYTQK--MTSILNSNDYEIIPGDPTKT 442
            N  L   ++    +  I   DK       D   Y  +   +S LN  D E +     K 
Sbjct: 394 NNRALLKGRMHLYKE-AIEDFDKAISIYEGDSEFYYYRGLTSSYLNELD-EALKY-INKA 450

Query: 443 IEESEKYGNLENESGQ-KHAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEE 501
           IE   KY N  NE G   +  S++  A  D     ++D     + Y     Y    +YE 
Sbjct: 451 IELDPKYINAYNERGLINYRNSNYNSAIEDFKNVIELDNENVYANYHLALSYDALEEYET 510

Query: 502 ALRNLDKTIALNPN 515
           AL+   + I L PN
Sbjct: 511 ALKYYARVIELEPN 524



 Score = 45.4 bits (106), Expect = 0.083,   Method: Compositional matrix adjust.
 Identities = 47/227 (20%), Positives = 99/227 (43%), Gaps = 8/227 (3%)

Query: 165 KVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQRHFVVHKMIVPGDR 224
           +++ ++  SYY R         YE+AL + +K I LNP    +   R  + ++M      
Sbjct: 316 EINDDIYYSYYNRALAEESLQLYEDALEDYNKAIELNPEDTYSYNNRGLIKNEM------ 369

Query: 225 ERVEQSLKEFRNFVDTHSNVVEACTLFAQVLVDQEDFDGAEEYFNRSIRVDPENASLYVH 284
           +  +++L+++   ++   +        A +      +  A E F+++I +   ++  Y +
Sbjct: 370 QMYDEALEDYNKAIELEKDDAYLYNNRALLKGRMHLYKEAIEDFDKAISIYEGDSEFYYY 429

Query: 285 RAMLMLQARGNVDEAIKLIEKAISIDKSCMFAYETLGTIEVQRGRLEEAVKCFNKALPLA 344
           R  L       +DEA+K I KAI +D   + AY   G I  +      A++ F   + L 
Sbjct: 430 RG-LTSSYLNELDEALKYINKAIELDPKYINAYNERGLINYRNSNYNSAIEDFKNVIELD 488

Query: 345 RDEAELSHIYSLRDAAIAQMKVCERYNIKK-KVSPRSQNITKNEKLA 390
            +    ++  +L   A+ + +   +Y  +  ++ P + +   N  LA
Sbjct: 489 NENVYANYHLALSYDALEEYETALKYYARVIELEPNTPDAFYNRALA 535


>gi|289192263|ref|YP_003458204.1| TPR repeat-containing protein [Methanocaldococcus sp. FS406-22]
 gi|288938713|gb|ADC69468.1| TPR repeat-containing protein [Methanocaldococcus sp. FS406-22]
          Length = 310

 Score = 65.1 bits (157), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 51/193 (26%), Positives = 97/193 (50%), Gaps = 12/193 (6%)

Query: 152 DFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQR 211
           D+ KA + LDE  K+     D Y ++G++    G+Y+EAL  LDK + L P++  A    
Sbjct: 21  DYEKAISILDELLKI-KKTPDFYVRKGRLLKSLGRYDEALECLDKALKLKPDYSRA---- 75

Query: 212 HFVVHKMIVPGDRERVEQSLKEFRNFVDT---HSNVVEACTLFAQVLVDQEDFDGAEEYF 268
           +F+  K ++     R+++S + F   ++     SN+   C + A +L+   +FD A +  
Sbjct: 76  YFL--KGVLLMSLGRLKESKEVFLKLLELDKQESNIGAKC-ITATILMRLGEFDEALKIL 132

Query: 269 NRSIRVDPENASLYVHRAMLMLQARGNVDEAIKLIEKAISIDKSCMFAYETLGTIEVQRG 328
                  P++A  +  +   +L + G + EA++  EKA+ ++     +    G I  + G
Sbjct: 133 ETMFEDYPKSAIAWAEKGE-ILYSEGKLKEALECFEKALEVNPKDYLSLLYKGEILFELG 191

Query: 329 RLEEAVKCFNKAL 341
           +  EA++CF K +
Sbjct: 192 KFREALECFEKII 204



 Score = 63.2 bits (152), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 40/194 (20%), Positives = 98/194 (50%), Gaps = 14/194 (7%)

Query: 157 FADLDEAEKV-------DPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARA 209
             + DEA K+        P  A ++ ++G+I    G+ +EAL   +K + +NP  +++  
Sbjct: 122 LGEFDEALKILETMFEDYPKSAIAWAEKGEILYSEGKLKEALECFEKALEVNPKDYLS-- 179

Query: 210 QRHFVVHKMIVPGDRERVEQSLKEFRNFVDTHSNVVEACTLFAQVLVDQEDFDGAEEYFN 269
               +++K  +  +  +  ++L+ F   +  +   + A     Q+L+       A+EY  
Sbjct: 180 ----LLYKGEILFELGKFREALECFEKIIQKNEKDIRALLYVIQILIFLGRITEAKEYIE 235

Query: 270 RSIRVDPENASLYVHRAMLMLQARGNVDEAIKLIEKAISIDKSCMFAYETLGTIEVQRGR 329
           ++++++P ++ LYV+  + +L   G   +A++  +K + I  + ++A+        + G+
Sbjct: 236 KALKLNPNSSLLYVYYGI-VLNKLGKYKKALEWFDKVLEISPTNVYAWHGKAVALEKLGK 294

Query: 330 LEEAVKCFNKALPL 343
           +E+A++C+ +A  L
Sbjct: 295 IEDALECYKRAFEL 308



 Score = 40.0 bits (92), Expect = 2.9,   Method: Compositional matrix adjust.
 Identities = 21/56 (37%), Positives = 33/56 (58%), Gaps = 1/56 (1%)

Query: 464 DFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVA 519
           D+ KA + LDE  K+     D Y ++G++    G+Y+EAL  LDK + L P++  A
Sbjct: 21  DYEKAISILDELLKI-KKTPDFYVRKGRLLKSLGRYDEALECLDKALKLKPDYSRA 75


>gi|124024552|ref|YP_001018859.1| hypothetical protein P9303_28641 [Prochlorococcus marinus str. MIT
           9303]
 gi|123964838|gb|ABM79594.1| Hypothetical protein P9303_28641 [Prochlorococcus marinus str. MIT
           9303]
          Length = 581

 Score = 65.1 bits (157), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 68/285 (23%), Positives = 113/285 (39%), Gaps = 52/285 (18%)

Query: 76  DYLTAIRHCTEEIESTSSNHTKALARLLRATVYIFTSQSTKAIEDLTQLVEDTSVDPKIK 135
           DY  AI      +E    N   A+A + R            A+ D ++ ++   +DP   
Sbjct: 308 DYQGAIDDQNNALEINPDN---AVAYVNRGLARSNMGDPKSALSDFSKAIK---IDPANA 361

Query: 136 VNAHIKRAVVHLHAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLD 195
           + A   R V    A  D   A  D ++A K+DP  A++Y  RG      G Y+ A+ +  
Sbjct: 362 M-AFSNRGVSK-QALGDPQGALDDYNKAIKIDPRNANAYANRGVNKGDLGDYQGAIADYS 419

Query: 196 KTIALNPNFHVARAQRHFVVHKMIVPGDRERVEQSLKEFRNFVDTHSNVVEACTLFAQVL 255
           K I +NP    A   R                                            
Sbjct: 420 KAIGINPQHSDAYYNRGIAK---------------------------------------- 439

Query: 256 VDQEDFDGAEEYFNRSIRVDPENASLYVHRAMLMLQARGNVDEAIKLIEKAISIDKSCMF 315
           ++ +D+ GA   +N++IR+  +NA +Y++R  L+    G+   AI    KAI +D     
Sbjct: 440 LESKDYQGAIADYNKAIRIGTQNARIYLNRG-LVYDNLGDYQRAIADYNKAIELDPQYAL 498

Query: 316 AYETLGTIEVQRGRLEEAVKCFNKALPLARDEAELSHIYSLRDAA 360
           AY   G  +++ G ++ A+   NKA+ L   +  ++  Y+ R AA
Sbjct: 499 AYVNRGLAKIKSGDIQGAIADSNKAIEL---DPRMAKAYANRGAA 540



 Score = 54.7 bits (130), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 65/274 (23%), Positives = 105/274 (38%), Gaps = 76/274 (27%)

Query: 257 DQEDFDGAEEYFNRSIRVDPENASLYVHRAMLMLQARGNVDE---AIKLIEKAISIDKSC 313
           D  D+ GA +  N ++ ++P+NA  YV+R +    AR N+ +   A+    KAI ID + 
Sbjct: 305 DLGDYQGAIDDQNNALEINPDNAVAYVNRGL----ARSNMGDPKSALSDFSKAIKIDPAN 360

Query: 314 MFAYETLGTIEVQRGRLEEAVKCFNKALPLARDEAELSHIYSLRDAAIAQMKVCERYNIK 373
             A+   G  +   G  + A+  +NKA+                                
Sbjct: 361 AMAFSNRGVSKQALGDPQGALDDYNKAI-------------------------------- 388

Query: 374 KKVSPRSQNITKNEKLAIKQLRENNDIIIRPADKGGKTVVMDKADYTQKMTSILNSNDYE 433
            K+ PR+ N   N                R  +KG      D  DY   +       DY 
Sbjct: 389 -KIDPRNANAYAN----------------RGVNKG------DLGDYQGAIA------DYS 419

Query: 434 IIPG-DPTKTIEESEKYGNLENESGQKHAASDFTKAFADLDEAEKVDPNVADSYYQRGQI 492
              G +P    + S+ Y    N    K  + D+  A AD ++A ++    A  Y  RG +
Sbjct: 420 KAIGINP----QHSDAY---YNRGIAKLESKDYQGAIADYNKAIRIGTQNARIYLNRGLV 472

Query: 493 YCLFGQYEEALRNLDKTIALNPNFHVARAQRHFV 526
           Y   G Y+ A+ + +K I L+P + +A   R   
Sbjct: 473 YDNLGDYQRAIADYNKAIELDPQYALAYVNRGLA 506



 Score = 48.1 bits (113), Expect = 0.013,   Method: Compositional matrix adjust.
 Identities = 41/170 (24%), Positives = 75/170 (44%), Gaps = 13/170 (7%)

Query: 184 FGQYEEALRNLDKTIALNPNFHVARAQRHFVVHKMIVPGDRERVEQSLKEFRNFVDTHSN 243
            G Y+ A+ + +  + +NP+  VA   R      M  P      + +L +F   +     
Sbjct: 306 LGDYQGAIDDQNNALEINPDNAVAYVNRGLARSNMGDP------KSALSDFSKAIKIDPA 359

Query: 244 VVEACT---LFAQVLVDQEDFDGAEEYFNRSIRVDPENASLYVHRAMLMLQARGNVDEAI 300
              A +   +  Q L D +   GA + +N++I++DP NA+ Y +R +      G+   AI
Sbjct: 360 NAMAFSNRGVSKQALGDPQ---GALDDYNKAIKIDPRNANAYANRGVNKGD-LGDYQGAI 415

Query: 301 KLIEKAISIDKSCMFAYETLGTIEVQRGRLEEAVKCFNKALPLARDEAEL 350
               KAI I+     AY   G  +++    + A+  +NKA+ +    A +
Sbjct: 416 ADYSKAIGINPQHSDAYYNRGIAKLESKDYQGAIADYNKAIRIGTQNARI 465


>gi|334121332|ref|ZP_08495403.1| Tetratricopeptide TPR_1 repeat-containing protein [Microcoleus
           vaginatus FGP-2]
 gi|333455148|gb|EGK83806.1| Tetratricopeptide TPR_1 repeat-containing protein [Microcoleus
           vaginatus FGP-2]
          Length = 1075

 Score = 65.1 bits (157), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 51/212 (24%), Positives = 94/212 (44%), Gaps = 9/212 (4%)

Query: 130 VDPKIKVNAHIKRAVVHLHAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEE 189
           +DPK  +  H     + L+A    ++A A  ++A ++DP    +++  G      G+  E
Sbjct: 245 IDPKEHIAWH--GLGITLNALGRNSEAIAAFEKALEIDPKEHIAWHGLGITLNALGRNSE 302

Query: 190 ALRNLDKTIALNPNFHVARAQRHFVVHKMIVPGDRERVEQSLKEFRNFVDTHSNVVEACT 249
           A+   +K + ++P  H+A       ++ +       R  +++  F+  ++       A  
Sbjct: 303 AIAAFEKALEIDPKAHIAWKGLGNALNAL------GRNSEAIAAFKKALEIDPKFHHAWN 356

Query: 250 LFAQVLVDQEDFDGAEEYFNRSIRVDPENASLYVHRAMLMLQARGNVDEAIKLIEKAISI 309
                L D   +  A   F +++ +DP+    + H    +L A G   EAI + EKA+ I
Sbjct: 357 GLGAPLNDLGRYSEAIAAFEKALEIDPKFHFAW-HGLGNVLNALGRYSEAIAVYEKALEI 415

Query: 310 DKSCMFAYETLGTIEVQRGRLEEAVKCFNKAL 341
           D    FA+  LG    + GR  EA+  + KAL
Sbjct: 416 DPKFHFAWNGLGNALGELGRYSEAIAAYEKAL 447



 Score = 55.8 bits (133), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 51/219 (23%), Positives = 91/219 (41%), Gaps = 11/219 (5%)

Query: 130 VDPKIKVNAHIKRAVVHLHAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEE 189
           +DPK  +  H     + L+A    ++A A  ++A ++DP    ++   G      G+  E
Sbjct: 279 IDPKEHIAWH--GLGITLNALGRNSEAIAAFEKALEIDPKAHIAWKGLGNALNALGRNSE 336

Query: 190 ALRNLDKTIALNPNFHVARAQRHFVVHKMIVP-GDRERVEQSLKEFRNFVDTHSNVVEAC 248
           A+    K + ++P FH A        + +  P  D  R  +++  F   ++       A 
Sbjct: 337 AIAAFKKALEIDPKFHHA-------WNGLGAPLNDLGRYSEAIAAFEKALEIDPKFHFAW 389

Query: 249 TLFAQVLVDQEDFDGAEEYFNRSIRVDPENASLYVHRAMLMLQARGNVDEAIKLIEKAIS 308
                VL     +  A   + +++ +DP+    +       L   G   EAI   EKA+ 
Sbjct: 390 HGLGNVLNALGRYSEAIAVYEKALEIDPKFHFAWNGLGN-ALGELGRYSEAIAAYEKALE 448

Query: 309 IDKSCMFAYETLGTIEVQRGRLEEAVKCFNKALPLARDE 347
           ID     A+  LG+     GR  EA+  F+KAL +  ++
Sbjct: 449 IDPKFHIAWNGLGSARRGLGRNSEAIAAFDKALEITGNQ 487



 Score = 52.4 bits (124), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 67/288 (23%), Positives = 110/288 (38%), Gaps = 54/288 (18%)

Query: 260 DFDGAEEYFNRSIRVDPENASLYVHRAMLMLQA----RGNVDEAIKLIEKAISIDKSCMF 315
           +  GA   F +++ +DP+      H A   L A     G   EAI   EKA+ ID     
Sbjct: 197 NLKGAIAAFEKALEIDPK-----FHHAWNGLGAPLNDLGRNSEAIAAFEKALEIDPKEHI 251

Query: 316 AYETLGTIEVQRGRLEEAVKCFNKALPLARDEAELSHIYSLRDAAIAQ-MKVCERYNIKK 374
           A+  LG      GR  EA+  F KAL +   E    H   +   A+ +  +    +    
Sbjct: 252 AWHGLGITLNALGRNSEAIAAFEKALEIDPKEHIAWHGLGITLNALGRNSEAIAAFEKAL 311

Query: 375 KVSPRSQNITKNEKLAIKQLRENNDIIIRPADKGGKTVVMDKADYTQKMTSILNSNDYEI 434
           ++ P++    K    A+  L  N++ I              KA               EI
Sbjct: 312 EIDPKAHIAWKGLGNALNALGRNSEAI----------AAFKKA--------------LEI 347

Query: 435 IPGDPTKTIEESEKYGNLENESGQKHAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYC 494
            P    K        G   N+ G+      +++A A  ++A ++DP    +++  G +  
Sbjct: 348 DP----KFHHAWNGLGAPLNDLGR------YSEAIAAFEKALEIDPKFHFAWHGLGNVLN 397

Query: 495 LFGQYEEALRNLDKTIALNPNFHVARAQRHFVWTS---TLAELMAFSD 539
             G+Y EA+   +K + ++P F       HF W      L EL  +S+
Sbjct: 398 ALGRYSEAIAVYEKALEIDPKF-------HFAWNGLGNALGELGRYSE 438


>gi|423452169|ref|ZP_17429022.1| hypothetical protein IEE_00913 [Bacillus cereus BAG5X1-1]
 gi|401142240|gb|EJQ49789.1| hypothetical protein IEE_00913 [Bacillus cereus BAG5X1-1]
          Length = 918

 Score = 65.1 bits (157), Expect = 9e-08,   Method: Compositional matrix adjust.
 Identities = 68/255 (26%), Positives = 118/255 (46%), Gaps = 18/255 (7%)

Query: 117 AIEDLTQLVEDTSVDPKIKVNAHIKRAVVHLHAASDFTKAFADLDEAEKVDPNVADSYYQ 176
           AI D T+++E   +D   K   +  RA  ++     + +A  D ++A ++D N A  Y +
Sbjct: 606 AILDYTKVIE---LDGN-KATFYDHRAYAYIQLEK-YEEAIEDCNKAIELDGNKAMFYNR 660

Query: 177 RGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQRHFVVHKMIVPGDRERVEQSLKEFRN 236
           RG IY   G+Y +A+   +K I L+ N  V    R FV  ++       + E++++E + 
Sbjct: 661 RGNIYSQLGKYGKAIGECNKAIELDGNRAVFYCNRAFVYSQL------GKYEEAIEECKK 714

Query: 237 FVDTHSNVVEACTLFAQVLVDQEDFDGAEEYFNRSIRVDPENASLYVHRAMLMLQARGNV 296
            +    N   A +  A V      ++ A E   + I +D  NAS Y +R+    Q     
Sbjct: 715 AIGLDGNNAAAYSCRAYVYNQSGKYEKAIEDCKKVIELDENNASAYSNRSYAYNQLE-KY 773

Query: 297 DEAIKLIEKAISIDKSCMFAYETLGTIEVQRGRLEEAVKCFNKALPLARDEAEL------ 350
           +EAI+   KAI +D S    Y   G    Q  + +EA++   KA+ L  ++ ++      
Sbjct: 774 EEAIEDCNKAIKLDGSRAVFYNNRGYAYNQLEKYKEAIEDCKKAIELIENKVDVHSKRIK 833

Query: 351 SHIYSLRDAAIAQMK 365
            + YS R  A  Q++
Sbjct: 834 GNAYSNRSHAYNQLE 848



 Score = 57.8 bits (138), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 91/374 (24%), Positives = 148/374 (39%), Gaps = 40/374 (10%)

Query: 155 KAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQRHFV 214
           KA    ++A ++D N   +Y  RG I    G+YE+A+ +  K I L+ N      +  F 
Sbjct: 571 KAIEMYNKAIELDGNYLSAYINRGHINRRQGEYEDAILDYTKVIELDGN------KATFY 624

Query: 215 VHKMIVPGDRERVEQSLKEFRNFVDTHSNVVEACTLFAQVLVDQEDFDGAEEYFNRSIRV 274
            H+       E+ E+++++    ++   N          +      +  A    N++I +
Sbjct: 625 DHRAYAYIQLEKYEEAIEDCNKAIELDGNKAMFYNRRGNIYSQLGKYGKAIGECNKAIEL 684

Query: 275 DPENASLYVHRAMLMLQARGNVDEAIKLIEKAISIDKSCMFAYETLGTIEVQRGRLEEAV 334
           D   A  Y +RA +  Q  G  +EAI+  +KAI +D +   AY     +  Q G+ E+A+
Sbjct: 685 DGNRAVFYCNRAFVYSQL-GKYEEAIEECKKAIGLDGNNAAAYSCRAYVYNQSGKYEKAI 743

Query: 335 KCFNKALPLARDEAELSHIYSLRDAAIAQM----KVCERYNIKKKVSPRSQNITKNEKLA 390
           +   K + L  + A     YS R  A  Q+    +  E  N   K+         N   A
Sbjct: 744 EDCKKVIELDENNA---SAYSNRSYAYNQLEKYEEAIEDCNKAIKLDGSRAVFYNNRGYA 800

Query: 391 IKQLRENNDIIIRPADKGGKTVVMDKADYTQKMTSILNSNDYEIIPGDPTKTIEESEKYG 450
             QL +  + I     K    ++ +K D   K            I G+       S  Y 
Sbjct: 801 YNQLEKYKEAI--EDCKKAIELIENKVDVHSKR-----------IKGNAYSN--RSHAYN 845

Query: 451 NLENESGQKHAASDFTKAFA-DLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKT 509
            LE     K A  D  KA     D+ E +       YY RG  Y     Y++A ++  K 
Sbjct: 846 QLEK---YKEAIEDCKKAIELGTDKTEVL-------YYNRGYAYEKLKDYQKAEKDYIKA 895

Query: 510 IALNPNFHVARAQR 523
           I +NP++  A   R
Sbjct: 896 IEVNPDYEEAIKAR 909



 Score = 42.0 bits (97), Expect = 0.78,   Method: Compositional matrix adjust.
 Identities = 65/286 (22%), Positives = 124/286 (43%), Gaps = 23/286 (8%)

Query: 255 LVDQEDFDGAEEYFNRSIRVDPENASLYVHRAMLMLQA-RGNVDEAIKLIEKAISIDKSC 313
           L++++ F+ A E   + I+   + A +Y     +  +    N  +AI++  KAI +D + 
Sbjct: 528 LINKKQFEQALELI-QQIQTANKTAKIYFFEGFIYDKMDNNNSKKAIEMYNKAIELDGNY 586

Query: 314 MFAYETLGTIEVQRGRLEEAVKCFNKALPLARDEAELSHIYSLRDAAIAQMKVCERYNIK 373
           + AY   G I  ++G  E+A+  + K + L  ++A     Y  R  A  Q+   E+Y  +
Sbjct: 587 LSAYINRGHINRRQGEYEDAILDYTKVIELDGNKATF---YDHRAYAYIQL---EKY--E 638

Query: 374 KKVSPRSQNITKNEKLAIKQLRENNDIIIRPADKGGKTVV-MDKADYTQKMTSILNSNDY 432
           + +   ++ I  +   A+   R  N  I     K GK +   +KA       ++   N  
Sbjct: 639 EAIEDCNKAIELDGNKAMFYNRRGN--IYSQLGKYGKAIGECNKAIELDGNRAVFYCNRA 696

Query: 433 EIIP--GDPTKTIEESEKYGNLENESGQKHA--------ASDFTKAFADLDEAEKVDPNV 482
            +    G   + IEE +K   L+  +   ++        +  + KA  D  +  ++D N 
Sbjct: 697 FVYSQLGKYEEAIEECKKAIGLDGNNAAAYSCRAYVYNQSGKYEKAIEDCKKVIELDENN 756

Query: 483 ADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQRHFVWT 528
           A +Y  R   Y    +YEEA+ + +K I L+ +  V    R + + 
Sbjct: 757 ASAYSNRSYAYNQLEKYEEAIEDCNKAIKLDGSRAVFYNNRGYAYN 802



 Score = 41.6 bits (96), Expect = 1.0,   Method: Compositional matrix adjust.
 Identities = 30/113 (26%), Positives = 49/113 (43%), Gaps = 1/113 (0%)

Query: 419 YTQKMTSILNSNDYEIIPGDPTKTIEESEKYGNLENESGQKHAA-SDFTKAFADLDEAEK 477
           Y  +  + +    YE    D  K IE         N  G  ++    + KA  + ++A +
Sbjct: 624 YDHRAYAYIQLEKYEEAIEDCNKAIELDGNKAMFYNRRGNIYSQLGKYGKAIGECNKAIE 683

Query: 478 VDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQRHFVWTST 530
           +D N A  Y  R  +Y   G+YEEA+    K I L+ N   A + R +V+  +
Sbjct: 684 LDGNRAVFYCNRAFVYSQLGKYEEAIEECKKAIGLDGNNAAAYSCRAYVYNQS 736


>gi|411119878|ref|ZP_11392254.1| tetratricopeptide repeat protein [Oscillatoriales cyanobacterium
           JSC-12]
 gi|410710034|gb|EKQ67545.1| tetratricopeptide repeat protein [Oscillatoriales cyanobacterium
           JSC-12]
          Length = 272

 Score = 65.1 bits (157), Expect = 9e-08,   Method: Compositional matrix adjust.
 Identities = 48/195 (24%), Positives = 87/195 (44%), Gaps = 7/195 (3%)

Query: 147 LHAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHV 206
           L+    +  A A  D+     P++ + +  RG      GQ  EAL N ++ + +N  F +
Sbjct: 17  LYGQGVYEGAIAQYDQLLANQPDLYEVWTYRGYALEQLGQLREALANFEQALKVNSEFAL 76

Query: 207 ARAQRHFVVHKMIVPGDRERVEQSLKEFRNFVDTHSNVVEACTLFAQVLVDQEDFDGAEE 266
           A   +  V  K+         +++L      V       +A       L+  + F+ A  
Sbjct: 77  AWHGKGIVFAKL------SDYDEALTCLDKTVKLAPKDPKAWYNRGNALIHLQRFEEALT 130

Query: 267 YFNRSIRVDPENASLYVHRAMLMLQARGNVDEAIKLIEKAISIDKSCMFAYETLGTIEVQ 326
            FNR+I + P++   + HR+   L   G +  A+  +EKA+SI   C +A+   GT+  +
Sbjct: 131 SFNRTIELTPDDYKAWYHRSK-TLTNLGYLYAALASLEKALSIKPDCYYAWSYRGTVLKK 189

Query: 327 RGRLEEAVKCFNKAL 341
            G  E+A+  F+ +L
Sbjct: 190 LGSYEDAIASFDHSL 204



 Score = 54.7 bits (130), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 49/219 (22%), Positives = 96/219 (43%), Gaps = 15/219 (6%)

Query: 117 AIEDLTQLVED-TSVDPKIKVNAHIKRAV----VHLHAASDFTKAFADLDEAEKVDPNVA 171
           A+E L QL E   + +  +KVN+    A     +     SD+ +A   LD+  K+ P   
Sbjct: 50  ALEQLGQLREALANFEQALKVNSEFALAWHGKGIVFAKLSDYDEALTCLDKTVKLAPKDP 109

Query: 172 DSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQRHFVVHKMIVPGDRERVEQSL 231
            ++Y RG       ++EEAL + ++TI L P+ + A   R   +  +        +  +L
Sbjct: 110 KAWYNRGNALIHLQRFEEALTSFNRTIELTPDDYKAWYHRSKTLTNL------GYLYAAL 163

Query: 232 KEFRNFVDTHSNVVEACTLFAQVLVDQEDFDGAEEYFNRSIRVDPENASLYVHRAMLMLQ 291
                 +    +   A +    VL     ++ A   F+ S+R+ P ++  + ++A     
Sbjct: 164 ASLEKALSIKPDCYYAWSYRGTVLKKLGSYEDAIASFDHSLRIKPNHSDAWYNKARCY-A 222

Query: 292 ARGNVDEAIKLIEKAISIDKSCMFAYETLGTIEVQRGRL 330
            +GN+ +A+  + +AI ++ +    Y  L  ++    RL
Sbjct: 223 LQGNIKQALCYLHRAIKLNPTL---YTALARVDSDFSRL 258



 Score = 43.1 bits (100), Expect = 0.40,   Method: Compositional matrix adjust.
 Identities = 19/60 (31%), Positives = 33/60 (55%)

Query: 463 SDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQ 522
             +  A A  D + ++ PN +D++Y + + Y L G  ++AL  L + I LNP  + A A+
Sbjct: 191 GSYEDAIASFDHSLRIKPNHSDAWYNKARCYALQGNIKQALCYLHRAIKLNPTLYTALAR 250



 Score = 38.5 bits (88), Expect = 9.5,   Method: Compositional matrix adjust.
 Identities = 20/61 (32%), Positives = 33/61 (54%)

Query: 463 SDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQ 522
           SD+ +A   LD+  K+ P    ++Y RG       ++EEAL + ++TI L P+ + A   
Sbjct: 89  SDYDEALTCLDKTVKLAPKDPKAWYNRGNALIHLQRFEEALTSFNRTIELTPDDYKAWYH 148

Query: 523 R 523
           R
Sbjct: 149 R 149


>gi|376005002|ref|ZP_09782572.1| hypothetical protein ARTHRO_370013 [Arthrospira sp. PCC 8005]
 gi|375326596|emb|CCE18325.1| hypothetical protein ARTHRO_370013 [Arthrospira sp. PCC 8005]
          Length = 915

 Score = 65.1 bits (157), Expect = 9e-08,   Method: Compositional matrix adjust.
 Identities = 51/194 (26%), Positives = 81/194 (41%), Gaps = 7/194 (3%)

Query: 153 FTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQRH 212
           F +A +   +A  + PN AD +Y  G      G  E A+   +K IALNP    A     
Sbjct: 87  FDEAISFYQQAIDLSPNWADLHYHLGSALHWQGNIEGAIGCYEKAIALNPKLGQAYLDMG 146

Query: 213 FVVHKMIVPGDRERVEQSLKEFRNFVDTHSNVVEACTLFAQVLVDQEDFDGAEEYFNRSI 272
             ++      +R  ++ ++K  +       N  E       + + Q   D A   F  S+
Sbjct: 147 LRLN------ERGDIDTAIKVLQQGGINCPNFQEIFNTLGYLQLQQNQIDEAIAIFQESL 200

Query: 273 RVDPENASLYVHRAMLMLQARGNVDEAIKLIEKAISIDKSCMFAYETLGTIEVQRGRLEE 332
            +DP    +Y +     L  +G + EAI   EKAIS+      AY  LG +  Q+    +
Sbjct: 201 NIDPTEPLVYNNLGW-ALACQGKLSEAIAAYEKAISLKPDLAIAYSNLGKLWQQKNNHRQ 259

Query: 333 AVKCFNKALPLARD 346
           A+  F KA+ +  D
Sbjct: 260 AISYFQKAIAIEPD 273



 Score = 57.8 bits (138), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 52/202 (25%), Positives = 92/202 (45%), Gaps = 14/202 (6%)

Query: 147 LHAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHV 206
           + A S +TKAF       ++ PN A SY    QIY   G ++EA+    + I L+PN+  
Sbjct: 54  MAAMSAYTKAF-------ELAPNQAISYAYLAQIYRNMGWFDEAISFYQQAIDLSPNW-- 104

Query: 207 ARAQRHFVVHKMIVPGDRERVEQSLKEFRNFVDTHSNVVEACTLFAQVLVDQEDFDGAEE 266
             A  H+  H       +  +E ++  +   +  +  + +A       L ++ D D A +
Sbjct: 105 --ADLHY--HLGSALHWQGNIEGAIGCYEKAIALNPKLGQAYLDMGLRLNERGDIDTAIK 160

Query: 267 YFNRSIRVDPENASLYVHRAMLMLQARGNVDEAIKLIEKAISIDKSCMFAYETLGTIEVQ 326
              +     P    ++     L LQ +  +DEAI + +++++ID +    Y  LG     
Sbjct: 161 VLQQGGINCPNFQEIFNTLGYLQLQ-QNQIDEAIAIFQESLNIDPTEPLVYNNLGWALAC 219

Query: 327 RGRLEEAVKCFNKALPLARDEA 348
           +G+L EA+  + KA+ L  D A
Sbjct: 220 QGKLSEAIAAYEKAISLKPDLA 241



 Score = 56.6 bits (135), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 44/187 (23%), Positives = 86/187 (45%), Gaps = 7/187 (3%)

Query: 155 KAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQRHFV 214
           +AFA   E     PN A +Y   G I+   GQ   A+    K   L PN  ++ A    +
Sbjct: 21  RAFAICREIISQQPNCAIAYQLLGNIHEDHGQLMAAMSAYTKAFELAPNQAISYAYLAQI 80

Query: 215 VHKMIVPGDRERVEQSLKEFRNFVDTHSNVVEACTLFAQVLVDQEDFDGAEEYFNRSIRV 274
              M         ++++  ++  +D   N  +        L  Q + +GA   + ++I +
Sbjct: 81  YRNM------GWFDEAISFYQQAIDLSPNWADLHYHLGSALHWQGNIEGAIGCYEKAIAL 134

Query: 275 DPENASLYVHRAMLMLQARGNVDEAIKLIEKAISIDKSCMFAYETLGTIEVQRGRLEEAV 334
           +P+    Y+    L L  RG++D AIK++++      +    + TLG +++Q+ +++EA+
Sbjct: 135 NPKLGQAYLDMG-LRLNERGDIDTAIKVLQQGGINCPNFQEIFNTLGYLQLQQNQIDEAI 193

Query: 335 KCFNKAL 341
             F ++L
Sbjct: 194 AIFQESL 200



 Score = 44.7 bits (104), Expect = 0.12,   Method: Compositional matrix adjust.
 Identities = 61/262 (23%), Positives = 99/262 (37%), Gaps = 51/262 (19%)

Query: 292 ARGNVDEAIKLIEKAISIDKSCMFAYETLGTIEVQRGRLEEAVKCFNKALPLARDE---- 347
           ++GN D A  +  + IS   +C  AY+ LG I    G+L  A+  + KA  LA ++    
Sbjct: 15  SKGNQDRAFAICREIISQQPNCAIAYQLLGNIHEDHGQLMAAMSAYTKAFELAPNQAISY 74

Query: 348 AELSHIY---SLRDAAIAQMK-------------------VCERYNIKKKVSPRSQNITK 385
           A L+ IY      D AI+  +                   +  + NI+  +    + I  
Sbjct: 75  AYLAQIYRNMGWFDEAISFYQQAIDLSPNWADLHYHLGSALHWQGNIEGAIGCYEKAIAL 134

Query: 386 NEKLAIKQLRENNDIIIRPADKGGKTVVMDKADYTQKMTSILNSNDYEIIPGDPTKTIEE 445
           N KL    L    D+ +R  ++G     +D A    +   I   N  EI           
Sbjct: 135 NPKLGQAYL----DMGLRLNERGD----IDTAIKVLQQGGINCPNFQEIF---------- 176

Query: 446 SEKYGNLENESGQKHAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRN 505
               G L+ +  Q        +A A   E+  +DP     Y   G      G+  EA+  
Sbjct: 177 -NTLGYLQLQQNQ------IDEAIAIFQESLNIDPTEPLVYNNLGWALACQGKLSEAIAA 229

Query: 506 LDKTIALNPNFHVARAQRHFVW 527
            +K I+L P+  +A +    +W
Sbjct: 230 YEKAISLKPDLAIAYSNLGKLW 251


>gi|428203744|ref|YP_007082333.1| hypothetical protein Ple7327_3576 [Pleurocapsa sp. PCC 7327]
 gi|427981176|gb|AFY78776.1| tetratricopeptide repeat protein [Pleurocapsa sp. PCC 7327]
          Length = 297

 Score = 65.1 bits (157), Expect = 9e-08,   Method: Compositional matrix adjust.
 Identities = 55/204 (26%), Positives = 91/204 (44%), Gaps = 27/204 (13%)

Query: 150 ASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARA 209
           A DF  A AD   A +++P   DSYY R   Y   G Y+ A+ +  K I LNPN+  A  
Sbjct: 74  AGDFQGAIADFTRAIELNPEDPDSYYNRAYAYHALGNYQPAIDDYGKAIELNPNYAYAYG 133

Query: 210 QRHFVVHKMIVPGDRERVEQSLKEFRNFVDTHSNVVEACTLFAQVLV----DQEDFDGAE 265
            R +  + M             K + + V   +  +E     A   +     Q+  D  E
Sbjct: 134 NRCYAFYLM-------------KRYDDAVSDCTKAIELEPKLADFYIYRGDAQDALDKHE 180

Query: 266 EY---FNRSIRVDPENASLYVHRAMLMLQARGNVDEAIKLIE---KAISIDKSCMFAYET 319
           E    +  +IR+  ++A+ Y  RA+    A G ++E  K ++   ++I +D+S   A+  
Sbjct: 181 EAIEDYTEAIRLKDDSANTYYKRAL----AYGALEEYQKALDDYTESIRLDESLADAFYQ 236

Query: 320 LGTIEVQRGRLEEAVKCFNKALPL 343
            G +  + G  EEA+    +A+ L
Sbjct: 237 RGIVNSKLGNEEEAIADIEQAVKL 260



 Score = 53.5 bits (127), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 52/196 (26%), Positives = 91/196 (46%), Gaps = 18/196 (9%)

Query: 117 AIEDLTQLVEDTSVDPKIKVNAHIKRAVVHLHAASDFTKAFADLDEAEKVDPNVADSYYQ 176
           AI D T+ +E    DP    +++  RA  + HA  ++  A  D  +A +++PN A +Y  
Sbjct: 80  AIADFTRAIELNPEDP----DSYYNRAYAY-HALGNYQPAIDDYGKAIELNPNYAYAYGN 134

Query: 177 RGQIYCLFGQYEEALRNLDKTIALNP---NFHVARAQRHFVVHKMIVPGDRERVEQSLKE 233
           R   + L  +Y++A+ +  K I L P   +F++ R      + K       E +E   + 
Sbjct: 135 RCYAFYLMKRYDDAVSDCTKAIELEPKLADFYIYRGDAQDALDKH-----EEAIEDYTEA 189

Query: 234 FRNFVDTHSNVVEACTLFAQVLVDQEDFDGAEEYFNRSIRVDPENASLYVHRAMLMLQAR 293
            R   D  +N      L    L   E++  A + +  SIR+D   A  +  R ++  +  
Sbjct: 190 IR-LKDDSANTYYKRALAYGAL---EEYQKALDDYTESIRLDESLADAFYQRGIVNSKL- 244

Query: 294 GNVDEAIKLIEKAISI 309
           GN +EAI  IE+A+ +
Sbjct: 245 GNEEEAIADIEQAVKL 260



 Score = 52.4 bits (124), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 27/74 (36%), Positives = 37/74 (50%)

Query: 454 NESGQKHAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALN 513
           N+   K  A DF  A AD   A +++P   DSYY R   Y   G Y+ A+ +  K I LN
Sbjct: 66  NQGVDKIEAGDFQGAIADFTRAIELNPEDPDSYYNRAYAYHALGNYQPAIDDYGKAIELN 125

Query: 514 PNFHVARAQRHFVW 527
           PN+  A   R + +
Sbjct: 126 PNYAYAYGNRCYAF 139



 Score = 48.9 bits (115), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 34/127 (26%), Positives = 64/127 (50%), Gaps = 14/127 (11%)

Query: 77  YLTAIRHCTEEIESTSSNHTKALARLLRATVYIFTSQSTKAIEDLTQLVEDTSVDPKIK- 135
           Y  A+  CT+ IE               A  YI+   +  A++   + +ED +   ++K 
Sbjct: 145 YDDAVSDCTKAIELEPK----------LADFYIYRGDAQDALDKHEEAIEDYTEAIRLKD 194

Query: 136 --VNAHIKRAVVHLHAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRN 193
              N + KRA+ +  A  ++ KA  D  E+ ++D ++AD++YQRG +    G  EEA+ +
Sbjct: 195 DSANTYYKRALAY-GALEEYQKALDDYTESIRLDESLADAFYQRGIVNSKLGNEEEAIAD 253

Query: 194 LDKTIAL 200
           +++ + L
Sbjct: 254 IEQAVKL 260



 Score = 40.4 bits (93), Expect = 2.5,   Method: Compositional matrix adjust.
 Identities = 42/145 (28%), Positives = 61/145 (42%), Gaps = 8/145 (5%)

Query: 256 VDQEDFDGAEEYFNRSIRVDPENASLYVHRAMLMLQARGNVDEAIKLIEKAISIDKSCMF 315
           ++  DF GA   F R+I ++PE+   Y +RA     A GN   AI    KAI ++ +  +
Sbjct: 72  IEAGDFQGAIADFTRAIELNPEDPDSYYNRAY-AYHALGNYQPAIDDYGKAIELNPNYAY 130

Query: 316 AYETLGTIEVQRGRLEEAVKCFNKALPLARDEAELSHIYSLR----DAAIAQMKVCERYN 371
           AY           R ++AV    KA+ L   E +L+  Y  R    DA     +  E Y 
Sbjct: 131 AYGNRCYAFYLMKRYDDAVSDCTKAIEL---EPKLADFYIYRGDAQDALDKHEEAIEDYT 187

Query: 372 IKKKVSPRSQNITKNEKLAIKQLRE 396
              ++   S N      LA   L E
Sbjct: 188 EAIRLKDDSANTYYKRALAYGALEE 212


>gi|407974687|ref|ZP_11155595.1| hypothetical protein NA8A_10303 [Nitratireductor indicus C115]
 gi|407429770|gb|EKF42446.1| hypothetical protein NA8A_10303 [Nitratireductor indicus C115]
          Length = 281

 Score = 65.1 bits (157), Expect = 9e-08,   Method: Compositional matrix adjust.
 Identities = 52/182 (28%), Positives = 82/182 (45%), Gaps = 7/182 (3%)

Query: 168 PNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQRHFVVHKMIVPGDRERV 227
           PN  ++Y  RG  Y   G+Y +AL++ DK IALNP  H A A R  +   M       + 
Sbjct: 63  PNEPEAYNMRGSAYGRAGRYADALKDFDKAIALNPRSHNAYANRALIYRYM------GQN 116

Query: 228 EQSLKEFRNFVDTHSNVVEACTLFAQVLVDQEDFDGAEEYFNRSIRVDPENASLYVHRAM 287
           +++L ++   +  +S+   A    A++         A     R+I++D  +   Y  R +
Sbjct: 117 DKALADYNQAIALNSSYDTAYIGRAEIYRLSGRSSEALADLERAIQLDTTDPRAYYRRGL 176

Query: 288 LMLQARGNVDEAIKLIEKAISIDKSCMFAYETLGTIEVQRGRLEEAVKCFNKALPLARDE 347
           L  QA G    AI+    AIS+     + Y   G   + +G  E A   FN A+ L  + 
Sbjct: 177 LY-QASGQHQYAIEDFATAISLAPEAPYGYNGRGLSYLAQGDEENAFSDFNTAIRLDGNI 235

Query: 348 AE 349
           AE
Sbjct: 236 AE 237



 Score = 47.0 bits (110), Expect = 0.023,   Method: Compositional matrix adjust.
 Identities = 21/48 (43%), Positives = 29/48 (60%)

Query: 480 PNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQRHFVW 527
           PN  ++Y  RG  Y   G+Y +AL++ DK IALNP  H A A R  ++
Sbjct: 63  PNEPEAYNMRGSAYGRAGRYADALKDFDKAIALNPRSHNAYANRALIY 110



 Score = 43.1 bits (100), Expect = 0.36,   Method: Compositional matrix adjust.
 Identities = 32/148 (21%), Positives = 67/148 (45%), Gaps = 37/148 (25%)

Query: 94  NHTKALARLLRATVYIFTSQSTKAIEDLTQLVEDTSVDPKIKVNAHIKRAVV------HL 147
           N +   A + RA +Y  + +S++A+ DL + ++  + DP+    A+ +R ++      H 
Sbjct: 130 NSSYDTAYIGRAEIYRLSGRSSEALADLERAIQLDTTDPR----AYYRRGLLYQASGQHQ 185

Query: 148 HAASDFT---------------------------KAFADLDEAEKVDPNVADSYYQRGQI 180
           +A  DF                             AF+D + A ++D N+A+S+  +  +
Sbjct: 186 YAIEDFATAISLAPEAPYGYNGRGLSYLAQGDEENAFSDFNTAIRLDGNIAESWANQALV 245

Query: 181 YCLFGQYEEALRNLDKTIALNPNFHVAR 208
           Y   G   +A ++  + + L+P++  AR
Sbjct: 246 YEKRGDKAKAAKSYSRALQLDPDYGPAR 273



 Score = 43.1 bits (100), Expect = 0.40,   Method: Compositional matrix adjust.
 Identities = 55/224 (24%), Positives = 86/224 (38%), Gaps = 67/224 (29%)

Query: 316 AYETLGTIEVQRGRLEEAVKCFNKALPLARDEAELSHIYSLRDAAIAQMKVCERYNIKKK 375
           AY   G+   + GR  +A+K F+KA+ L                                
Sbjct: 68  AYNMRGSAYGRAGRYADALKDFDKAIAL-------------------------------- 95

Query: 376 VSPRSQNITKNEKLAIKQLRENNDIIIRPADKGGKTVVMDKADYTQKMTSILNSNDYEII 435
            +PRS N   N  L  + + +N+  +               ADY Q +   LNS+ Y+  
Sbjct: 96  -NPRSHNAYANRALIYRYMGQNDKAL---------------ADYNQAIA--LNSS-YD-- 134

Query: 436 PGDPTKTIEESEKYGNLENESGQKHAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCL 495
               T  I  +E Y  L   S         ++A ADL+ A ++D     +YY+RG +Y  
Sbjct: 135 ----TAYIGRAEIY-RLSGRS---------SEALADLERAIQLDTTDPRAYYRRGLLYQA 180

Query: 496 FGQYEEALRNLDKTIALNPNFHVARAQRHFVWTSTLAELMAFSD 539
            GQ++ A+ +    I+L P        R   + +   E  AFSD
Sbjct: 181 SGQHQYAIEDFATAISLAPEAPYGYNGRGLSYLAQGDEENAFSD 224



 Score = 39.3 bits (90), Expect = 5.7,   Method: Compositional matrix adjust.
 Identities = 26/88 (29%), Positives = 43/88 (48%), Gaps = 5/88 (5%)

Query: 441 KTIEESEKYGNLENESGQKHA-ASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQY 499
           +T  E E Y    N  G  +  A  +  A  D D+A  ++P   ++Y  R  IY   GQ 
Sbjct: 61  RTPNEPEAY----NMRGSAYGRAGRYADALKDFDKAIALNPRSHNAYANRALIYRYMGQN 116

Query: 500 EEALRNLDKTIALNPNFHVARAQRHFVW 527
           ++AL + ++ IALN ++  A   R  ++
Sbjct: 117 DKALADYNQAIALNSSYDTAYIGRAEIY 144


>gi|427722550|ref|YP_007069827.1| hypothetical protein Lepto7376_0567 [Leptolyngbya sp. PCC 7376]
 gi|427354270|gb|AFY36993.1| Tetratricopeptide TPR_1 repeat-containing protein [Leptolyngbya sp.
           PCC 7376]
          Length = 493

 Score = 65.1 bits (157), Expect = 9e-08,   Method: Compositional matrix adjust.
 Identities = 55/245 (22%), Positives = 104/245 (42%), Gaps = 42/245 (17%)

Query: 153 FTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQRH 212
           + +A     +A  + PN A+ +Y+RG ++ L  Q  +AL N  K + +N N        H
Sbjct: 154 YHEAIQSYSKALVIKPNSAEIWYKRGLVFELLSQDNDALMNYSKALEINQN------SPH 207

Query: 213 FVVHKMIVPGDRERVEQSLKEFRNFVDTHSNVVEACTLFAQVLVDQEDFDGAEEYFNRSI 272
            +  +  +    ER +++L  F   ++  ++ VEA +    +L   +  + A   + +++
Sbjct: 208 ILCARGSILVRLERFQEALMCFNRAIELKADCVEAWSHKGFLLEQLKKIEDAIFSYGQAL 267

Query: 273 RVDPENASLYVHRAMLMLQAR---------------------------------GNVDEA 299
            V+P    L+ HR  L L+ +                                 G+V  A
Sbjct: 268 AVNPNQEILWYHRGNLFLRQKQYQRGLHSYDEVLRLNREHYQSLNNKGVSLYKLGDVHGA 327

Query: 300 IKLIEKAISIDKSCMFAYETLGTIEVQRGRLEEAVKCFNKALPLARDEAELSHIYSLRDA 359
            K  +K + I+     A+   G I    G  +EA+ C++KAL +   E + S I+S R  
Sbjct: 328 FKCFQKVLEINPYAFSAWNNQGQICKAIGDYQEAIICYDKALKV---EPKQSKIWSKRGL 384

Query: 360 AIAQM 364
            +A++
Sbjct: 385 CLAKL 389



 Score = 60.5 bits (145), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 76/373 (20%), Positives = 160/373 (42%), Gaps = 24/373 (6%)

Query: 153 FTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQRH 212
           + +A    DEA  +D   ++++Y RG +     +Y EAL + +  + L  +   A   R 
Sbjct: 52  YREALISFDEAIAIDAEHSETWYNRGIVLFQLQRYGEALDSYNHAVELRADSVPAWNNRG 111

Query: 213 FVVHKMIVPGDRERVEQSLKEFRNFVDTHSNVVEACTLFAQVLVDQEDFDGAEEYFNRSI 272
              + + V G   + E+++  +   +    +   +      +L + + +  A + +++++
Sbjct: 112 ---NTLKVLG---KYEEAIDSYDQALKLEPDDYLSWDNKGDLLKELKQYHEAIQSYSKAL 165

Query: 273 RVDPENASLYVHRAMLMLQARGNVDEAIKLIEKAISIDKSCMFAYETLGTIEVQRGRLEE 332
            + P +A ++  R  L+ +     ++A+    KA+ I+++        G+I V+  R +E
Sbjct: 166 VIKPNSAEIWYKRG-LVFELLSQDNDALMNYSKALEINQNSPHILCARGSILVRLERFQE 224

Query: 333 AVKCFNKALPLARDEAELSHIYSLRDAAIAQMKVCERYNIKKKVSPRSQNITKNEKLAIK 392
           A+ CFN+A+ L  D  E    +S +   + Q+K      I+  +    Q +  N    I 
Sbjct: 225 ALMCFNRAIELKADCVE---AWSHKGFLLEQLK-----KIEDAIFSYGQALAVNPNQEIL 276

Query: 393 QLRENNDIIIRPADKGG-----KTVVMDKADY---TQKMTSILNSNDYEIIPGDPTKTIE 444
                N  + +   + G     + + +++  Y     K  S+    D         K +E
Sbjct: 277 WYHRGNLFLRQKQYQRGLHSYDEVLRLNREHYQSLNNKGVSLYKLGDVHGAFKCFQKVLE 336

Query: 445 ESEKYGNLENESGQ-KHAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEAL 503
            +    +  N  GQ   A  D+ +A    D+A KV+P  +  + +RG      G YEEA+
Sbjct: 337 INPYAFSAWNNQGQICKAIGDYQEAIICYDKALKVEPKQSKIWSKRGLCLAKLGHYEEAI 396

Query: 504 RNLDKTIALNPNF 516
            +  + I L+ ++
Sbjct: 397 NSFQQAIQLDKSY 409



 Score = 53.5 bits (127), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 42/180 (23%), Positives = 86/180 (47%), Gaps = 7/180 (3%)

Query: 162 EAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQRHFVVHKMIVP 221
           +A  V+PN    +Y RG ++    QY+  L + D+ + LN   + +   +   ++K+   
Sbjct: 265 QALAVNPNQEILWYHRGNLFLRQKQYQRGLHSYDEVLRLNREHYQSLNNKGVSLYKL--- 321

Query: 222 GDRERVEQSLKEFRNFVDTHSNVVEACTLFAQVLVDQEDFDGAEEYFNRSIRVDPENASL 281
           GD   V  + K F+  ++ +     A     Q+     D+  A   ++++++V+P+ + +
Sbjct: 322 GD---VHGAFKCFQKVLEINPYAFSAWNNQGQICKAIGDYQEAIICYDKALKVEPKQSKI 378

Query: 282 YVHRAMLMLQARGNVDEAIKLIEKAISIDKSCMFAYETLGTIEVQRGRLEEAVKCFNKAL 341
           +  R  L L   G+ +EAI   ++AI +DKS   A      +   +  L+ A++   KA+
Sbjct: 379 WSKRG-LCLAKLGHYEEAINSFQQAIQLDKSYAEALYAQAAVFAVQQNLQLALEYLGKAI 437



 Score = 52.8 bits (125), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 70/386 (18%), Positives = 156/386 (40%), Gaps = 53/386 (13%)

Query: 147 LHAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHV 206
           L     + +A    D+A K++P+   S+  +G +     QY EA+++  K + + PN   
Sbjct: 114 LKVLGKYEEAIDSYDQALKLEPDDYLSWDNKGDLLKELKQYHEAIQSYSKALVIKPNSAE 173

Query: 207 ARAQRHFVVHKMIVPGDRERVEQSLKEFRNFVDTHSNVVEACTLFAQVLVDQEDFDGAEE 266
              +R  V   +    D      +L  +   ++ + N          +LV  E F  A  
Sbjct: 174 IWYKRGLVFELLSQDND------ALMNYSKALEINQNSPHILCARGSILVRLERFQEALM 227

Query: 267 YFNRSIRVDPENASLYVHRAMLMLQARGNVDEAIKLIEKAISIDKSCMFAYETLGTIEVQ 326
            FNR+I +  +    + H+  L+ Q +  +++AI    +A++++ +    +   G + ++
Sbjct: 228 CFNRAIELKADCVEAWSHKGFLLEQLK-KIEDAIFSYGQALAVNPNQEILWYHRGNLFLR 286

Query: 327 RGRLEEAVKCFNKALPLARDEAELSHIYSLRDAAIAQMKVCERYNIKK------KVSPRS 380
           + + +  +  +++ L L R+     H  SL +  ++  K+ + +   K      +++P +
Sbjct: 287 QKQYQRGLHSYDEVLRLNRE-----HYQSLNNKGVSLYKLGDVHGAFKCFQKVLEINPYA 341

Query: 381 QNITKNEKLAIKQLRENNDIIIRPADKGGKTVVMDKADYTQKMTSILNSNDYEIIPGDPT 440
            +   N+    K + +  + II   DK  K        ++++   +     YE       
Sbjct: 342 FSAWNNQGQICKAIGDYQEAII-CYDKALKVEPKQSKIWSKRGLCLAKLGHYE------- 393

Query: 441 KTIEESEKYGNLENESGQKHAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYE 500
                                     +A     +A ++D + A++ Y +  ++ +    +
Sbjct: 394 --------------------------EAINSFQQAIQLDKSYAEALYAQAAVFAVQQNLQ 427

Query: 501 EALRNLDKTIALNPNF-HVARAQRHF 525
            AL  L K I+ NP +  VA+  R+F
Sbjct: 428 LALEYLGKAISANPKYIQVAQLDRNF 453



 Score = 44.3 bits (103), Expect = 0.19,   Method: Compositional matrix adjust.
 Identities = 33/144 (22%), Positives = 62/144 (43%), Gaps = 10/144 (6%)

Query: 145 VHLHAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNF 204
           V L+   D   AF    +  +++P    ++  +GQI    G Y+EA+   DK + + P  
Sbjct: 316 VSLYKLGDVHGAFKCFQKVLEINPYAFSAWNNQGQICKAIGDYQEAIICYDKALKVEPKQ 375

Query: 205 HVARAQRHFVVHKMIVPGDRERVEQSLKEFRNFVDTHSNVVEACTLFAQVLVDQEDFDGA 264
               ++R   + K+         E+++  F+  +    +  EA    A V   Q++   A
Sbjct: 376 SKIWSKRGLCLAKL------GHYEEAINSFQQAIQLDKSYAEALYAQAAVFAVQQNLQLA 429

Query: 265 EEYFNRSIRVDPENASLYVHRAML 288
            EY  ++I  +P+    Y+  A L
Sbjct: 430 LEYLGKAISANPK----YIQVAQL 449



 Score = 42.7 bits (99), Expect = 0.54,   Method: Compositional matrix adjust.
 Identities = 47/246 (19%), Positives = 104/246 (42%), Gaps = 12/246 (4%)

Query: 104 RATVYIFTSQSTKAIEDLTQLVEDTSVDPKIKVNAHIKRAVVHLHAASDFTKAFADLDEA 163
           R  V+   SQ   A+ + ++ +E     P I       R  + L     F +A    + A
Sbjct: 178 RGLVFELLSQDNDALMNYSKALEINQNSPHILC----ARGSI-LVRLERFQEALMCFNRA 232

Query: 164 EKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQRHFVVHKMIVPGD 223
            ++  +  +++  +G +     + E+A+ +  + +A+NPN      Q     H+  +   
Sbjct: 233 IELKADCVEAWSHKGFLLEQLKKIEDAIFSYGQALAVNPN------QEILWYHRGNLFLR 286

Query: 224 RERVEQSLKEFRNFVDTHSNVVEACTLFAQVLVDQEDFDGAEEYFNRSIRVDPENASLYV 283
           +++ ++ L  +   +  +    ++       L    D  GA + F + + ++P   S + 
Sbjct: 287 QKQYQRGLHSYDEVLRLNREHYQSLNNKGVSLYKLGDVHGAFKCFQKVLEINPYAFSAWN 346

Query: 284 HRAMLMLQARGNVDEAIKLIEKAISIDKSCMFAYETLGTIEVQRGRLEEAVKCFNKALPL 343
           ++  +  +A G+  EAI   +KA+ ++      +   G    + G  EEA+  F +A+ L
Sbjct: 347 NQGQIC-KAIGDYQEAIICYDKALKVEPKQSKIWSKRGLCLAKLGHYEEAINSFQQAIQL 405

Query: 344 ARDEAE 349
            +  AE
Sbjct: 406 DKSYAE 411


>gi|354569225|ref|ZP_08988381.1| Tetratricopeptide TPR_1 repeat-containing protein [Fischerella sp.
           JSC-11]
 gi|353538880|gb|EHC08390.1| Tetratricopeptide TPR_1 repeat-containing protein [Fischerella sp.
           JSC-11]
          Length = 666

 Score = 65.1 bits (157), Expect = 9e-08,   Method: Compositional matrix adjust.
 Identities = 81/385 (21%), Positives = 157/385 (40%), Gaps = 32/385 (8%)

Query: 152 DFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQR 211
           D+  A A+  +A +++P  A++YY RG      G  + A+ +  +T+ +NP    A   R
Sbjct: 256 DYQGAIANYTQAIRLNPRYANAYYNRGIARSDIGDKQGAIADYTQTVKINPRHDDAYYNR 315

Query: 212 HFVVHKMIVPGDRERVEQSLKEFRNFVDTHSNVVEACTLFAQVLVDQEDFDGAEEYFNRS 271
             V +++      +  + ++ ++   +  + N  +A         + +D  GA   +N++
Sbjct: 316 GLVYYEL------KNYQAAIADYNESLKINPNAEDAYLNRGLARYELKDIQGAMADYNQA 369

Query: 272 IRVDPENASLYVHRAMLMLQARGNVDEAIKLIEKAISIDKSCMFAYETLGTIEVQRGRLE 331
           ++++P     Y +R  L   A G+   A+    +AI  + +   AY   G    + G  +
Sbjct: 370 LKINPNYDKGYYNRG-LARSASGDKKGALADYNQAIKFNPNYDKAYYNRGLTRYELGDKQ 428

Query: 332 EAVKCFNKALPLARDEAELSHIYSLRDAAIAQ----MKVCERYNIKKKVSPRSQNITKNE 387
             +  +N+A+ +       +  Y  R  A+++     K  + +N   K+ P   +     
Sbjct: 429 GEIDDYNQAIKI---NPNYALAYYNRGIALSEKGDTQKALDDFNQTIKLRPDYTDAYIYR 485

Query: 388 KLAIKQLRE--------NNDIIIRPADKGGKTVVMDKADYTQKMTSILNSNDYEIIPGDP 439
            L +  L          N  I + P          DKA Y + +T      D +    D 
Sbjct: 486 GLTLYDLGNKQGAFNDFNQAIKLSPN--------YDKAYYNRGLTR-YELGDKQGAITDY 536

Query: 440 TKTIEESEKYGNLENESGQKHA-ASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQ 498
            + ++ + KY N     G   A   D   A AD ++A K  P+   +YY RG  Y     
Sbjct: 537 NQALKINPKYANAYLNRGLTRADLGDRQGAIADYNQALKYKPDYDKAYYNRGIAYFDLKN 596

Query: 499 YEEALRNLDKTIALNPNFHVARAQR 523
            ++AL + ++ I +N  +  A   R
Sbjct: 597 LQQALADFNQAIKINSKYANAYYNR 621



 Score = 48.9 bits (115), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 48/198 (24%), Positives = 88/198 (44%), Gaps = 19/198 (9%)

Query: 94  NHTKALARLLRATVYIFTSQSTKAIEDLTQLVEDTSVDPKIKVNAHIKRAVVHLHAASDF 153
           N   ALA   R         + KA++D  Q ++   + P    +A+I R +  L+   + 
Sbjct: 441 NPNYALAYYNRGIALSEKGDTQKALDDFNQTIK---LRPDY-TDAYIYRGLT-LYDLGNK 495

Query: 154 TKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQRHF 213
             AF D ++A K+ PN   +YY RG      G  + A+ + ++ + +NP +  A   R  
Sbjct: 496 QGAFNDFNQAIKLSPNYDKAYYNRGLTRYELGDKQGAITDYNQALKINPKYANAYLNRGL 555

Query: 214 VVHKMIVPGDRERV----EQSLKEFRNFVDTHSNVVEACTLFAQVLVDQEDFDGAEEYFN 269
               +   GDR+       Q+LK   ++   + N       F     D ++   A   FN
Sbjct: 556 TRADL---GDRQGAIADYNQALKYKPDYDKAYYN--RGIAYF-----DLKNLQQALADFN 605

Query: 270 RSIRVDPENASLYVHRAM 287
           ++I+++ + A+ Y +RA+
Sbjct: 606 QAIKINSKYANAYYNRAL 623


>gi|327404890|ref|YP_004345728.1| hypothetical protein Fluta_2911 [Fluviicola taffensis DSM 16823]
 gi|327320398|gb|AEA44890.1| Tetratricopeptide TPR_1 repeat-containing protein [Fluviicola
           taffensis DSM 16823]
          Length = 364

 Score = 65.1 bits (157), Expect = 9e-08,   Method: Compositional matrix adjust.
 Identities = 57/227 (25%), Positives = 109/227 (48%), Gaps = 12/227 (5%)

Query: 117 AIEDLTQLVEDTSVDPKIKVNAHIKRAVVHLHAASDFTKAFADLDEAEKVDPNVADSYYQ 176
           A++  T L+E      K    A+ +R   +    SD+ K+  D +E+ ++D N   +YY 
Sbjct: 102 ALKTFTTLIEKQKGYSK----AYFQRGRAY-QGLSDYLKSEKDYEESIRLDANNPKAYYN 156

Query: 177 RGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQRHFVVHKMIVPGDRERVEQSLKEFRN 236
            G +  L   Y  A++   K+I L+P+  +A   R    ++M     +E   ++++++  
Sbjct: 157 YGTLKFLQQDYNAAIKYFTKSIELDPSSPMAYNDRG-SCYRM-----QENYPKAIEDYEA 210

Query: 237 FVDTHSNVVEACTLFAQVLVDQEDFDGAEEYFNRSIRVDPENASLYVHRAMLMLQARGNV 296
            +  + N+              +D+ GA   FNR+I VD      Y +R + +L+ +G++
Sbjct: 211 ALRKNPNLAFVLNNVGTTKKKMKDYSGALIAFNRAISVDVNFFLAYNNRGVALLE-KGSL 269

Query: 297 DEAIKLIEKAISIDKSCMFAYETLGTIEVQRGRLEEAVKCFNKALPL 343
           D+AIK  EKA+ I+     A   L  I  +R   ++A +  +KA+ +
Sbjct: 270 DDAIKDFEKAMQINPKYAPAASNLAGIYFKRKDFKKAEELASKAIAI 316



 Score = 53.9 bits (128), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 51/219 (23%), Positives = 98/219 (44%), Gaps = 15/219 (6%)

Query: 70  RAFEH-EDYLTAIRHCTEEIESTSSNHTKALARLLRATVYIFTSQSTKAIEDLTQLVEDT 128
           RA++   DYL + +   E I    +N+ KA       T+         AI+  T+ +E  
Sbjct: 125 RAYQGLSDYLKSEKDYEESIR-LDANNPKAYYNY--GTLKFLQQDYNAAIKYFTKSIE-- 179

Query: 129 SVDPKIKVNAHIKRAVVHLHAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYE 188
            +DP   +  + + +   +    ++ KA  D + A + +PN+A      G        Y 
Sbjct: 180 -LDPSSPMAYNDRGSCYRMQ--ENYPKAIEDYEAALRKNPNLAFVLNNVGTTKKKMKDYS 236

Query: 189 EALRNLDKTIALNPNFHVARAQRHFVVHKMIVPGDRERVEQSLKEFRNFVDTHSNVVEAC 248
            AL   ++ I+++ NF +A   R   +       ++  ++ ++K+F   +  +     A 
Sbjct: 237 GALIAFNRAISVDVNFFLAYNNRGVALL------EKGSLDDAIKDFEKAMQINPKYAPAA 290

Query: 249 TLFAQVLVDQEDFDGAEEYFNRSIRVDPENASLYVHRAM 287
           +  A +   ++DF  AEE  +++I +DP  AS YV+R M
Sbjct: 291 SNLAGIYFKRKDFKKAEELASKAIAIDPNYASAYVNRGM 329



 Score = 44.3 bits (103), Expect = 0.16,   Method: Compositional matrix adjust.
 Identities = 72/323 (22%), Positives = 124/323 (38%), Gaps = 51/323 (15%)

Query: 187 YEEALRNLDKTIALNPNFHVARAQRHFVVHKMIVPGDRERVEQSLKEFRNFVDTHSNVVE 246
           ++EA+ + +K+I+ +PNF  A        +K +   + E    +LK F   ++      +
Sbjct: 65  FKEAIGSFNKSISSDPNFTAA------YYNKGVAENEAEMYMDALKTFTTLIEKQKGYSK 118

Query: 247 ACTLFAQVLVDQEDFDGAEEYFNRSIRVDPENASLYVHRAML-MLQARGNVDEAIKLIEK 305
           A     +      D+  +E+ +  SIR+D  N   Y +   L  LQ   N   AIK   K
Sbjct: 119 AYFQRGRAYQGLSDYLKSEKDYEESIRLDANNPKAYYNYGTLKFLQQDYNA--AIKYFTK 176

Query: 306 AISIDKSCMFAYETLGTIEVQRGRLEEAVKCFNKALPLARDEAELSHIYSLRDAAIAQMK 365
           +I +D S   AY   G+    +    +A++ +  AL   R    L+ +  L +    + K
Sbjct: 177 SIELDPSSPMAYNDRGSCYRMQENYPKAIEDYEAAL---RKNPNLAFV--LNNVGTTKKK 231

Query: 366 VCERYNIKKKVSPRSQNITKNEKLAIKQLRENNDIIIRPADKGGKTVVMDKADYTQKMTS 425
           + + Y+       R+ ++  N  LA                            Y  +  +
Sbjct: 232 M-KDYSGALIAFNRAISVDVNFFLA----------------------------YNNRGVA 262

Query: 426 ILNSNDYEIIPGDPTKTIEESEKYG-NLENESGQKHAASDFTKAFADLDEAEKVDPNVAD 484
           +L     +    D  K ++ + KY     N +G      DF KA     +A  +DPN A 
Sbjct: 263 LLEKGSLDDAIKDFEKAMQINPKYAPAASNLAGIYFKRKDFKKAEELASKAIAIDPNYAS 322

Query: 485 SYYQRGQIYCLFGQYEEALRNLD 507
           +Y  RG          E LR +D
Sbjct: 323 AYVNRGMA-------REMLRKMD 338


>gi|432328071|ref|YP_007246215.1| tetratricopeptide repeat protein [Aciduliprofundum sp. MAR08-339]
 gi|432134780|gb|AGB04049.1| tetratricopeptide repeat protein [Aciduliprofundum sp. MAR08-339]
          Length = 596

 Score = 65.1 bits (157), Expect = 9e-08,   Method: Compositional matrix adjust.
 Identities = 84/382 (21%), Positives = 161/382 (42%), Gaps = 47/382 (12%)

Query: 137 NAHIKRAVVHLHAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDK 196
           +  I RA+  L     + +A + L+ A K +P+  + ++  G  Y   G+Y+ A  +  K
Sbjct: 6   DVEIDRAL-ELMMEGYYREAISHLEIALKKNPDNYEIWFYLGNAYYAVGEYKRARSSYLK 64

Query: 197 TIALNPNF-HVARAQRHFVVHKMIVPGDRERVEQSLKEFRNFVDTHSNVVEACTLFAQVL 255
            ++LNP+F  V  +  +  V    +   R  +   LK+F+N    +        L A  L
Sbjct: 65  VLSLNPSFPEVYLSLANLYVRMGNLKRARRVIRAGLKKFKNENFQY--------LSAVAL 116

Query: 256 VDQEDFDGAEEYFNRSIRVDPENASLYVHRAMLMLQARGNVDEAIKLIEKAISIDKSCMF 315
           V+ ED++ AE+     ++   ++    V   +     RG  ++A++  ++A+  +   + 
Sbjct: 117 VNAEDYNLAEKVLRELMKKGAKDLHFVVLGNIYF--GRGEKEKALEFYDRALEENPENVE 174

Query: 316 AYETLGTIEVQRGRLEEAVKCFNKALPLARDEAELSHIYSLRDAAIAQMKVC-ERYNIKK 374
           A+   G +    G  EEA+KC+++AL +     E  +       A+ Q+      Y    
Sbjct: 175 AWNNKGFLLFTLGLYEEALKCYDRALEIEPSYKEAWYNRGYTHHAMGQLSAAVADYWHAL 234

Query: 375 KVSPRSQNITKNEKLAIKQLRENNDIIIRPADKGGKTVVMDKADYTQKMTSILNSNDYEI 434
           ++  R +    N   A+  L+                  M+   Y  K  S+ N N YEI
Sbjct: 235 RIDSRDEIAWNNMGNALYNLKH----------------YMESIPYFMKSVSV-NPN-YEI 276

Query: 435 IPGDPTKTIEESEKYGNLENESGQKHAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYC 494
                         + N+ N   + H    ++  F   ++A  ++P    +++ +G   C
Sbjct: 277 -------------AWNNIGNALDRMH-MHKYSIPFH--EKALSINPKFDYAWHAKGHALC 320

Query: 495 LFGQYEEALRNLDKTIALNPNF 516
             G+YEEAL  L+  I L+P++
Sbjct: 321 ELGKYEEALECLENAIDLDPDY 342



 Score = 52.8 bits (125), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 60/280 (21%), Positives = 122/280 (43%), Gaps = 24/280 (8%)

Query: 101 RLLRATVYIFTSQSTKAIEDLTQL-VEDTSVDPKIKVNAHIKRAVVHLH---------AA 150
           R++RA +  F +++ + +  +  +  ED ++  K+ +   +K+    LH           
Sbjct: 94  RVIRAGLKKFKNENFQYLSAVALVNAEDYNLAEKV-LRELMKKGAKDLHFVVLGNIYFGR 152

Query: 151 SDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQ 210
            +  KA    D A + +P   +++  +G +    G YEEAL+  D+ + + P++  A   
Sbjct: 153 GEKEKALEFYDRALEENPENVEAWNNKGFLLFTLGLYEEALKCYDRALEIEPSYKEAWYN 212

Query: 211 RHFVVHKMIVPGDRERVEQSLKEFRNFVDTHSNVVEACTLFAQVLVDQEDFDGAEEYFNR 270
           R +  H M       ++  ++ ++ + +   S    A       L + + +  +  YF +
Sbjct: 213 RGYTHHAM------GQLSAAVADYWHALRIDSRDEIAWNNMGNALYNLKHYMESIPYFMK 266

Query: 271 SIRVDPENASLYVHRAMLMLQARGNVDEAIKLIEKAISIDKSCMFAYETLGTIEVQRGRL 330
           S+ V+P N  +  +     L        +I   EKA+SI+    +A+   G    + G+ 
Sbjct: 267 SVSVNP-NYEIAWNNIGNALDRMHMHKYSIPFHEKALSINPKFDYAWHAKGHALCELGKY 325

Query: 331 EEAVKCFNKALPLARDEAELSHIYSLRDAAIAQMKVCERY 370
           EEA++C   A+ L  D  E    +  R  A+ ++   ERY
Sbjct: 326 EEALECLENAIDLDPDYGE---TWYWRGLALYKL---ERY 359



 Score = 46.2 bits (108), Expect = 0.040,   Method: Compositional matrix adjust.
 Identities = 53/227 (23%), Positives = 106/227 (46%), Gaps = 27/227 (11%)

Query: 118 IEDLTQLVEDTSVDPKIKVNAH-IKRAV--VHLHAASDFTKAFADLDEAEKVDPNVADSY 174
           +E +   ++  SV+P  ++  + I  A+  +H+H    ++  F +  +A  ++P    ++
Sbjct: 258 MESIPYFMKSVSVNPNYEIAWNNIGNALDRMHMH---KYSIPFHE--KALSINPKFDYAW 312

Query: 175 YQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQRHFVVHKMIVPGDRERVEQSLKEF 234
           + +G   C  G+YEEAL  L+  I L+P++      R   ++K+      ER E++++  
Sbjct: 313 HAKGHALCELGKYEEALECLENAIDLDPDYGETWYWRGLALYKL------ERYEEAIESL 366

Query: 235 RNFVDTHSNVVEACTLFAQVLVDQEDFDG--AEEYFNRSIRVDPENASLYVHRAMLMLQA 292
           +  ++  + +V+A  L   +     DF G   E      I ++  NA     RA + ++ 
Sbjct: 367 KIAMERDTTLVKAPELIGDIY----DFLGYPTESVKYYEIALNRGNAE---DRARIYIKM 419

Query: 293 RGNVDEAIKLIEKAISIDKSCMFAYETLGTIEVQRGRLEEA-VKCFN 338
            G  +EA++  ++  SI    +F       I   +GR E A  KC +
Sbjct: 420 -GRYEEALRYGDE--SIKARILFKLGRYDEILNMKGRAEVAYYKCLS 463


>gi|428310633|ref|YP_007121610.1| hypothetical protein Mic7113_2401 [Microcoleus sp. PCC 7113]
 gi|428252245|gb|AFZ18204.1| TPR repeat-containing protein [Microcoleus sp. PCC 7113]
          Length = 595

 Score = 65.1 bits (157), Expect = 9e-08,   Method: Compositional matrix adjust.
 Identities = 63/267 (23%), Positives = 119/267 (44%), Gaps = 15/267 (5%)

Query: 44  GLSNGVELTNGDTNESHELDLLSKAKRAFEHEDYLTAIRHCTEEIESTSSNHTKALARLL 103
           GL  G  +     N+++     ++     + ED   AI+   + I    +N    LA   
Sbjct: 187 GLVAGFLVLLQSQNQTNAKSYYNQGVEKLKKEDRRGAIQDFDQAIRLNPNN---PLAYGN 243

Query: 104 RATVYIFTSQSTKAIEDLTQLVEDTSVDPKIKVNAHIKRAVVHLHAASDFTKAFADLDEA 163
           R   +        AIED +Q++    ++P  K  A+  R +   +   D+  A  D D+ 
Sbjct: 244 RGNAHYDLGDYKAAIEDYSQMIR---LEPN-KAGAYYNRGLAR-YDLQDWQGAIEDFDQL 298

Query: 164 EKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQRHFVVHKMIVPGD 223
            ++ PN A++YY+RG  Y     Y  A+ +L++ I LNPN   A   R     +    GD
Sbjct: 299 IRLQPNDAEAYYKRGITYFELKNYRAAIEDLNQVIRLNPNEAKAYVSRGLARSEA---GD 355

Query: 224 RERVEQSLKEFRNFVDTHSNVVEACTLFAQVLVDQEDFDGAEEYFNRSIRVDPENASLYV 283
           +    ++++++   ++      +A     +      D+ GA E + ++I ++P+NA+ Y 
Sbjct: 356 Q---REAMEDYTKALELEPKNAKAYYSRGRARFLLGDYGGAVEDYTQAIELEPKNAAAYT 412

Query: 284 HRAMLMLQARGNVDEAIKLIEKAISID 310
           +R    L    + D AI    +AI+++
Sbjct: 413 NRCSARLNLSAHQD-AIVDCTQAIALN 438



 Score = 60.5 bits (145), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 88/375 (23%), Positives = 150/375 (40%), Gaps = 52/375 (13%)

Query: 152 DFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQR 211
           D   A  D D+A +++PN   +Y  RG  +   G Y+ A+ +  + I L PN   A   R
Sbjct: 219 DRRGAIQDFDQAIRLNPNNPLAYGNRGNAHYDLGDYKAAIEDYSQMIRLEPNKAGAYYNR 278

Query: 212 HFVVHKMIVPGDRERVEQSLKEFRNFVDTHSNVVEACTLFAQVLVDQEDFDGAEEYFNRS 271
               +      D +  + ++++F   +    N  EA         + +++  A E  N+ 
Sbjct: 279 GLARY------DLQDWQGAIEDFDQLIRLQPNDAEAYYKRGITYFELKNYRAAIEDLNQV 332

Query: 272 IRVDPENASLYVHRAMLMLQARGNVDEAIKLIEKAISIDKSCMFAYETLGTIEVQRGRLE 331
           IR++P  A  YV R +   +A G+  EA++   KA+ ++     AY + G      G   
Sbjct: 333 IRLNPNEAKAYVSRGLARSEA-GDQREAMEDYTKALELEPKNAKAYYSRGRARFLLGDYG 391

Query: 332 EAVKCFNKALPL-ARDEAELSHIYSLRDAAIAQMKVCERYNIKKKVSPRSQNITKNEKLA 390
            AV+ + +A+ L  ++ A  ++  S R    A             ++P       N  +A
Sbjct: 392 GAVEDYTQAIELEPKNAAAYTNRCSARLNLSAHQDAIVDCTQAIALNPNKDEPYNNRCIA 451

Query: 391 IKQLRE----------------NNDII------IRPADKGGKTVVMDKADYTQKMTSILN 428
              L++                NND        IR  + G K   ++  DYTQ +   LN
Sbjct: 452 YFNLKDYQNALQDCSQAIRFNPNNDTAYSNRGDIR-RNLGDKQGALE--DYTQAIR--LN 506

Query: 429 SNDYEIIPGDPTKTIEESEKYGNLENESGQKHAASDFTKAFADLDEAEKVDPNVADSYYQ 488
           SN+          +I  S       N +  +    D   A AD  +A +++P  A +YY 
Sbjct: 507 SNN----------SIAYS-------NRADARRDLGDQQGAIADYTDAIRLNPKNAFAYYG 549

Query: 489 RGQIYCLFGQYEEAL 503
           RG  +   G   EA+
Sbjct: 550 RGLTHLAVGNKSEAI 564



 Score = 58.2 bits (139), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 86/357 (24%), Positives = 142/357 (39%), Gaps = 48/357 (13%)

Query: 171 ADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQRHFVVHKMIVPGDRERVEQS 230
           A SYY +G           A+++ D+ I LNPN  +A   R    + +   GD    + +
Sbjct: 204 AKSYYNQGVEKLKKEDRRGAIQDFDQAIRLNPNNPLAYGNRGNAHYDL---GD---YKAA 257

Query: 231 LKEFRNFVDTHSNVVEACTLFAQVLVDQEDFDGAEEYFNRSIRVDPENASLYVHRAMLML 290
           ++++   +    N   A         D +D+ GA E F++ IR+ P +A  Y  R +   
Sbjct: 258 IEDYSQMIRLEPNKAGAYYNRGLARYDLQDWQGAIEDFDQLIRLQPNDAEAYYKRGITYF 317

Query: 291 QARGNVDEAIKLIEKAISIDKSCMFAYETLGTIEVQRGRLEEAVKCFNKALPLARDEAEL 350
           + + N   AI+ + + I ++ +   AY + G    + G   EA++ + KAL L   E + 
Sbjct: 318 ELK-NYRAAIEDLNQVIRLNPNEAKAYVSRGLARSEAGDQREAMEDYTKALEL---EPKN 373

Query: 351 SHIYSLRDAAIAQMK----VCERYNIKKKVSPRSQNITKNEKLAIKQLRENNDIIIRPAD 406
           +  Y  R  A   +       E Y    ++ P++     N   A   L  + D I+    
Sbjct: 374 AKAYYSRGRARFLLGDYGGAVEDYTQAIELEPKNAAAYTNRCSARLNLSAHQDAIV---- 429

Query: 407 KGGKTVVMDKADYTQKMTSILNSNDYEIIPGDPTKTIEESEKYGNLENESGQKHAASDFT 466
                      D TQ +   LN N  E     P         Y NL+          D+ 
Sbjct: 430 -----------DCTQAIA--LNPNKDE-----PYNN--RCIAYFNLK----------DYQ 459

Query: 467 KAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQR 523
            A  D  +A + +PN   +Y  RG I    G  + AL +  + I LN N  +A + R
Sbjct: 460 NALQDCSQAIRFNPNNDTAYSNRGDIRRNLGDKQGALEDYTQAIRLNSNNSIAYSNR 516



 Score = 47.8 bits (112), Expect = 0.017,   Method: Compositional matrix adjust.
 Identities = 60/241 (24%), Positives = 92/241 (38%), Gaps = 49/241 (20%)

Query: 66  SKAKRAFEHEDYLTAIRHCTEEIESTSSNHTKALARLLRATVYIFTSQSTKAIEDLTQLV 125
           S+ +  F   DY  A+   T+ IE    N   A A   R +  +  S    AI D TQ +
Sbjct: 379 SRGRARFLLGDYGGAVEDYTQAIELEPKN---AAAYTNRCSARLNLSAHQDAIVDCTQAI 435

Query: 126 EDTSVDPKIKVNAHIKRAVVHLHAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFG 185
              +++P  K   +  R + + +   D+  A  D  +A + +PN   +Y  RG I    G
Sbjct: 436 ---ALNPN-KDEPYNNRCIAYFNL-KDYQNALQDCSQAIRFNPNNDTAYSNRGDIRRNLG 490

Query: 186 QYEEALRNLDKTIALNPNFHVARAQRHFVVHKMIVPGDRERVEQSLKEFRNFVDTHSNVV 245
             + AL +  + I LN N  +A + R                                  
Sbjct: 491 DKQGALEDYTQAIRLNSNNSIAYSNR---------------------------------- 516

Query: 246 EACTLFAQVLVDQEDFDGAEEYFNRSIRVDPENASLYVHRAMLMLQARGNVDEAIKLIEK 305
                 A    D  D  GA   +  +IR++P+NA  Y  R +  L A GN  EAI   ++
Sbjct: 517 ------ADARRDLGDQQGAIADYTDAIRLNPKNAFAYYGRGLTHL-AVGNKSEAITDFQE 569

Query: 306 A 306
           A
Sbjct: 570 A 570


>gi|428312973|ref|YP_007123950.1| serine/threonine protein kinase [Microcoleus sp. PCC 7113]
 gi|428254585|gb|AFZ20544.1| serine/threonine protein kinase [Microcoleus sp. PCC 7113]
          Length = 738

 Score = 65.1 bits (157), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 43/189 (22%), Positives = 91/189 (48%), Gaps = 7/189 (3%)

Query: 153 FTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQRH 212
           ++ A A  D+A ++ PN A ++  RG       QYEEA+++ +K +   P+F  A  QR 
Sbjct: 485 YSDAIASFDKAIELQPNYAPTWNHRGWALHNLRQYEEAVKSYNKAVEYQPDFPNAWYQRG 544

Query: 213 FVVHKMIVPGDRERVEQSLKEFRNFVDTHSNVVEACTLFAQVLVDQEDFDGAEEYFNRSI 272
             +  +      ++ +++++ +   V    N  +A       L++   ++ A   F++++
Sbjct: 545 NALINL------QKYQEAVESYDKAVQFQPNFYKAWYSRGSALLNLRQYEQAFASFDQAV 598

Query: 273 RVDPENASLYVHRAMLMLQARGNVDEAIKLIEKAISIDKSCMFAYETLGTIEVQRGRLEE 332
           + +P+++  + +R   + Q +    EA+    KAI + K    A   LG +  +  R ++
Sbjct: 599 KFNPDDSEAWYNRGWSLHQLQ-RYQEAVASYNKAIQLRKKFYQAQYNLGNVFYKLKRYQD 657

Query: 333 AVKCFNKAL 341
           A   +NK L
Sbjct: 658 AFVSYNKVL 666



 Score = 63.2 bits (152), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 68/377 (18%), Positives = 150/377 (39%), Gaps = 50/377 (13%)

Query: 153 FTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQRH 212
           +  A A  + A ++ P  A ++  +G       +YEEA    DK I + P++  A   R 
Sbjct: 383 YDDALASYNRAVELKPEYAAAWNGKGNTLLALKRYEEARNAYDKAIQIQPDYAEAWIGRG 442

Query: 213 FVVHKMIVPGDRERVEQSLKEFRNFVDTHSNVVEACTLFAQVLVDQEDFDGAEEYFNRSI 272
             +  +      ++ ++++  F   ++  S+ +EA      V +  + +  A   F+++I
Sbjct: 443 NALDSL------QQYKEAINSFDRALEFKSDSLEAWNNKGNVQIKLQKYSDAIASFDKAI 496

Query: 273 RVDPENASLYVHRAMLMLQARGNVDEAIKLIEKAISIDKSCMFAYETLGTIEVQRGRLEE 332
            + P  A  + HR   +   R   +EA+K   KA+        A+   G   +   + +E
Sbjct: 497 ELQPNYAPTWNHRGWALHNLR-QYEEAVKSYNKAVEYQPDFPNAWYQRGNALINLQKYQE 555

Query: 333 AVKCFNKALPLARDEAELSHIYSLRDAAIAQMKVCER----YNIKKKVSPRSQNITKNEK 388
           AV+ ++KA+     +      +  R +A+  ++  E+    ++   K +P       N  
Sbjct: 556 AVESYDKAVQF---QPNFYKAWYSRGSALLNLRQYEQAFASFDQAVKFNPDDSEAWYNRG 612

Query: 389 LAIKQLRENNDIIIRPADKGGKTVVMDKADYTQKMTSILNSNDYEIIPGDPTKTIEESEK 448
            ++ QL+   + +               A Y                     K I+  +K
Sbjct: 613 WSLHQLQRYQEAV---------------ASYN--------------------KAIQLRKK 637

Query: 449 YGNLENESGQK-HAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLD 507
           +   +   G   +    +  AF   ++  ++ PN  +++Y RG       +Y++A+ + +
Sbjct: 638 FYQAQYNLGNVFYKLKRYQDAFVSYNKVLEIQPNHYEAWYSRGNALVNLKRYQDAIDSYN 697

Query: 508 KTIALNPNFHVARAQRH 524
           K +   P++  A+  R+
Sbjct: 698 KALQYKPDYQAAKDARN 714



 Score = 57.4 bits (137), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 47/230 (20%), Positives = 101/230 (43%), Gaps = 15/230 (6%)

Query: 147 LHAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHV 206
           L +   + +A    D A +   +  +++  +G +     +Y +A+ + DK I L PN+  
Sbjct: 445 LDSLQQYKEAINSFDRALEFKSDSLEAWNNKGNVQIKLQKYSDAIASFDKAIELQPNYAP 504

Query: 207 ARAQRHFVVHKMIVPGDRERVEQSLKEFRNFVDTHSNVVEACTLFAQVLVDQEDFDGAEE 266
               R + +H +       + E+++K +   V+   +   A       L++ + +  A E
Sbjct: 505 TWNHRGWALHNL------RQYEEAVKSYNKAVEYQPDFPNAWYQRGNALINLQKYQEAVE 558

Query: 267 YFNRSIRVDPENASLYVHRAMLMLQARGNVDEAIKLIEKAISIDKSCMFAYETLGTIEVQ 326
            ++++++  P     +  R   +L  R   ++A    ++A+  +     A+   G    Q
Sbjct: 559 SYDKAVQFQPNFYKAWYSRGSALLNLR-QYEQAFASFDQAVKFNPDDSEAWYNRGWSLHQ 617

Query: 327 RGRLEEAVKCFNKALPLARD----EAELSHI-YSLR---DAAIAQMKVCE 368
             R +EAV  +NKA+ L +     +  L ++ Y L+   DA ++  KV E
Sbjct: 618 LQRYQEAVASYNKAIQLRKKFYQAQYNLGNVFYKLKRYQDAFVSYNKVLE 667


>gi|440684051|ref|YP_007158846.1| Tetratricopeptide TPR_1 repeat-containing protein [Anabaena
           cylindrica PCC 7122]
 gi|428681170|gb|AFZ59936.1| Tetratricopeptide TPR_1 repeat-containing protein [Anabaena
           cylindrica PCC 7122]
          Length = 1176

 Score = 65.1 bits (157), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 42/194 (21%), Positives = 89/194 (45%), Gaps = 7/194 (3%)

Query: 153 FTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQRH 212
            T+A A  D+A  + P+   ++Y RG I   FG ++ A+ + D+ I   P++  A + R 
Sbjct: 352 LTEAIAAYDQALSLKPDFHKAWYNRGGILGEFGDFDNAIASFDQAIQFKPDYQEAWSSRG 411

Query: 213 FVVHKMIVPGDRERVEQSLKEFRNFVDTHSNVVEACTLFAQVLVDQEDFDGAEEYFNRSI 272
             + K+ +      + +++  +   +    +  E        L   E ++ A   ++R+I
Sbjct: 412 LALLKLGL------IWEAISSYDQALKLQPHDQETWYYRGVALAVGEQYEDAIASYDRAI 465

Query: 273 RVDPENASLYVHRAMLMLQARGNVDEAIKLIEKAISIDKSCMFAYETLGTIEVQRGRLEE 332
            + P+   +++ R +++   +    EAI+  ++A+SI      A    G      GR EE
Sbjct: 466 DIQPDYHEVWIDRGVVLFSLK-RWSEAIESWDQALSIQPDVYLACYNRGIALENLGRREE 524

Query: 333 AVKCFNKALPLARD 346
           A+  + +A+ +  D
Sbjct: 525 AITSYQQAITIKPD 538



 Score = 51.6 bits (122), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 45/214 (21%), Positives = 90/214 (42%), Gaps = 10/214 (4%)

Query: 151 SDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQ 210
            DF  A A  D+A +  P+  +++  RG      G   EA+ + D+ + L P+       
Sbjct: 384 GDFDNAIASFDQAIQFKPDYQEAWSSRGLALLKLGLIWEAISSYDQALKLQPH------D 437

Query: 211 RHFVVHKMIVPGDRERVEQSLKEFRNFVDTHSNVVEACTLFAQVLVDQEDFDGAEEYFNR 270
           +    ++ +     E+ E ++  +   +D   +  E       VL   + +  A E +++
Sbjct: 438 QETWYYRGVALAVGEQYEDAIASYDRAIDIQPDYHEVWIDRGVVLFSLKRWSEAIESWDQ 497

Query: 271 SIRVDPENASLYVHRAMLMLQARGNVDEAIKLIEKAISIDKSCMFAYETLGTIEVQRGRL 330
           ++ + P+   L  +   + L+  G  +EAI   ++AI+I      A+           R 
Sbjct: 498 ALSIQPD-VYLACYNRGIALENLGRREEAITSYQQAITIKPDFHPAWYNQAVALFYLDRF 556

Query: 331 EEAVKCFNKALPLARDEAELSHIYSLRDAAIAQM 364
            EA+ C++ AL +  D  E    +  R  A+A +
Sbjct: 557 PEAIACYDSALEIKLDYWE---AWLGRAGAVANL 587



 Score = 41.6 bits (96), Expect = 1.2,   Method: Compositional matrix adjust.
 Identities = 18/59 (30%), Positives = 32/59 (54%)

Query: 465 FTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQR 523
            T+A A  D+A  + P+   ++Y RG I   FG ++ A+ + D+ I   P++  A + R
Sbjct: 352 LTEAIAAYDQALSLKPDFHKAWYNRGGILGEFGDFDNAIASFDQAIQFKPDYQEAWSSR 410



 Score = 39.7 bits (91), Expect = 4.5,   Method: Compositional matrix adjust.
 Identities = 18/60 (30%), Positives = 34/60 (56%)

Query: 467 KAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQRHFV 526
           +A +  D+A K+ P+  +++Y RG    +  QYE+A+ + D+ I + P++H     R  V
Sbjct: 422 EAISSYDQALKLQPHDQETWYYRGVALAVGEQYEDAIASYDRAIDIQPDYHEVWIDRGVV 481


>gi|406952433|gb|EKD82044.1| hypothetical protein ACD_39C01506G0001, partial [uncultured
           bacterium]
          Length = 994

 Score = 65.1 bits (157), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 84/396 (21%), Positives = 170/396 (42%), Gaps = 41/396 (10%)

Query: 138 AHIKRAVVHLHAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKT 197
           AH++ A V+L A     +A  +   A ++DP++A++    G +Y +  QYE A     + 
Sbjct: 279 AHVELAEVYL-AMEKSARAIEEYKLALEIDPSLAEALANLGDLYNMSEQYELAGNCYRRL 337

Query: 198 IALNPNFHVARAQRHFVVHKMIVPGDRERVEQSLKEFRNFVDTHSNVVEACTLFAQVLVD 257
           + ++P  H AR +     +         ++E++L E+    + +    +A     ++   
Sbjct: 338 VEMDPQNHSARFRLAETCYHC------GQLEKALDEYLKVAEINEERTDALIRLGKIYAS 391

Query: 258 QEDFDGAEEYFNRSIRVDPENASLYVHRAMLMLQARGNVDEAIKLIEKAISIDKSCMFAY 317
            E ++ A +Y+ R    DP+N+ +++    +       + +A++  E A+  + +     
Sbjct: 392 LEKWEDAAKYYVRVFETDPQNSLIHLELGKVY-DHLNRLTDALREFEAALEREPNNPEIL 450

Query: 318 ETLGTIEVQRGRLEEAVKCFNKAL------PLARDEAELSHIYSLR-DAAIAQMKVCERY 370
             +G +  ++G L+ A++ FN+A+      PL   E  +++I   R D AI + K    Y
Sbjct: 451 TQIGLMHRKQGNLDMAIERFNRAIQIDGSNPLPHRELAMAYINKGRVDKAIGEFKEALNY 510

Query: 371 NIKKKVSPRSQNITKNEKLAIKQLRENNDIIIRPADKGGKTVVMDKADYTQKM------- 423
                      NI  N +LA  +   +  II    D   K + +D  +            
Sbjct: 511 --------EPSNIVVNIELA--KAYASQGIIDDAVDSYRKVIGLDPRNSNAHFELGIIYS 560

Query: 424 TSILNSN---DYEIIPGDPTKTIEESEKYGNLENESGQKHAASDFTKAFADLDEAEKVDP 480
           T  LN N   +++ + G          + G    ++G+   A D      +L +A ++DP
Sbjct: 561 TQGLNDNAISEFKTVIGLSPDHKRAHLELGRHLRDTGRVDEAID------ELRKASQLDP 614

Query: 481 NVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNF 516
             A  YY+ G +Y    +Y++AL    + + L  ++
Sbjct: 615 ENAVIYYELGDVYYQRDEYQDALVKFKRALELQDDY 650



 Score = 47.8 bits (112), Expect = 0.015,   Method: Compositional matrix adjust.
 Identities = 94/458 (20%), Positives = 171/458 (37%), Gaps = 87/458 (18%)

Query: 96  TKALARLLRATVYIFTSQSTKAIEDLTQLVEDTSVDPKIKVNAHIKRAVVHLHAASDFTK 155
           T AL RL    +Y    +   A +   ++ E    DP+  +  H++   V+ H  +  T 
Sbjct: 379 TDALIRL--GKIYASLEKWEDAAKYYVRVFE---TDPQNSL-IHLELGKVYDHL-NRLTD 431

Query: 156 AFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIAL---NPNFHVARAQRH 212
           A  + + A + +PN  +   Q G ++   G  + A+   ++ I +   NP  H   A  +
Sbjct: 432 ALREFEAALEREPNNPEILTQIGLMHRKQGNLDMAIERFNRAIQIDGSNPLPHRELAMAY 491

Query: 213 FVVHKMIVPGDRERVEQSLKEFRNFVDTH-SNVVEACTLFAQVLVDQEDFDGAEEYFNRS 271
                     ++ RV++++ EF+  ++   SN+V    L A+    Q   D A + + + 
Sbjct: 492 I---------NKGRVDKAIGEFKEALNYEPSNIVVNIEL-AKAYASQGIIDDAVDSYRKV 541

Query: 272 IRVDPENASLYVHRAMLM---------------------------------LQARGNVDE 298
           I +DP N++ +    ++                                  L+  G VDE
Sbjct: 542 IGLDPRNSNAHFELGIIYSTQGLNDNAISEFKTVIGLSPDHKRAHLELGRHLRDTGRVDE 601

Query: 299 AIKLIEKAISIDKSCMFAYETLGTIEVQRGRLEEAVKCFNKALPLARDEAELSHIYSLRD 358
           AI  + KA  +D      Y  LG +  QR   ++A+  F +AL L  D  ++        
Sbjct: 602 AIDELRKASQLDPENAVIYYELGDVYYQRDEYQDALVKFKRALELQDDYVDVYQKLGTIH 661

Query: 359 AAIAQMKVCERYNIKKKVSPRSQNITKNEKLAIKQLRENNDIIIRPADKGGKTVVMDKAD 418
           +++   K  +++  +K +   ++N +          RE  +   +  D  G     +KA 
Sbjct: 662 SSMEHWKEAKQF-FEKAIELEAENYSI--------YRELGEACEKLGDVEGAISSFEKA- 711

Query: 419 YTQKMTSILNSNDYEIIPGDPTKTIEESEKYGNLENESGQKHAASDFTKAFADLDEAEKV 478
                         E  PGD         +Y    N          F        +A + 
Sbjct: 712 -------------LEFKPGDLNIIYRLGAQYKQNNN----------FNAMVVLYSKAVEA 748

Query: 479 DPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNF 516
            P  A  Y++ G+ Y   GQ  EA  N ++ + LN N 
Sbjct: 749 APKNALFYFELGEAYRGLGQQNEAASNFEQALTLNENL 786



 Score = 43.1 bits (100), Expect = 0.35,   Method: Compositional matrix adjust.
 Identities = 51/215 (23%), Positives = 99/215 (46%), Gaps = 17/215 (7%)

Query: 146 HLHAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFH 205
           HL       +A  +L +A ++DP  A  YY+ G +Y    +Y++AL    + + L  ++ 
Sbjct: 592 HLRDTGRVDEAIDELRKASQLDPENAVIYYELGDVYYQRDEYQDALVKFKRALELQDDY- 650

Query: 206 VARAQRHFVVHKMI--VPGDRERVEQSLK-EFRNFVDTHSNVVEACTLFAQVLVDQEDFD 262
           V   Q+   +H  +      ++  E++++ E  N+   +  + EAC           D +
Sbjct: 651 VDVYQKLGTIHSSMEHWKEAKQFFEKAIELEAENY-SIYRELGEACEKLG-------DVE 702

Query: 263 GAEEYFNRSIRVDPENASLYVHRAMLMLQARGNVDEAIKLIEKAI-SIDKSCMFAYETLG 321
           GA   F +++   P + ++ ++R     +   N +  + L  KA+ +  K+ +F +E LG
Sbjct: 703 GAISSFEKALEFKPGDLNI-IYRLGAQYKQNNNFNAMVVLYSKAVEAAPKNALFYFE-LG 760

Query: 322 TIEVQRGRLEEAVKCFNKALPLARDEAELSHIYSL 356
                 G+  EA   F +AL L  +E  +  IY+L
Sbjct: 761 EAYRGLGQQNEAASNFEQALTL--NENLIECIYAL 793



 Score = 40.8 bits (94), Expect = 1.7,   Method: Compositional matrix adjust.
 Identities = 49/232 (21%), Positives = 87/232 (37%), Gaps = 46/232 (19%)

Query: 149 AASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVAR 208
           AAS+F +A         ++ N+ +  Y  G I+     YE+ +R   K I   P    A 
Sbjct: 772 AASNFEQALT-------LNENLIECIYALGGIFWENQHYEKMVRLYKKAINRYPTNSRAH 824

Query: 209 AQRHFVVHKMIVPGDRERVEQSLKEFRNFVDTHSNVVEACTLFAQVLVDQEDFDGAEEYF 268
            +     ++++  GD      ++ EF+  ++  SN  E      ++ +D        E  
Sbjct: 825 FELGKAYYRLLKIGD------AIDEFKKVINLDSNHQEVYFELGRLYIDNGMLSEGAETL 878

Query: 269 NRSIRVDPENASLYV-----------------------------HRAMLMLQA----RGN 295
            +++ + PEN   +                              +  +L + A    R +
Sbjct: 879 EKAVAITPENGEAHFLLGKAYEGLNDKSKATQSFKKAQGQMEENYEVLLKVGADYLERES 938

Query: 296 VDEAIKLIEKAISIDKSCMFAYETLGTIEVQRGRLEEAVKCFNKALPLARDE 347
            +EA++ + KA    ++    Y  LG      G+ EEAVK F KA  L   E
Sbjct: 939 YEEALQQLTKAAKFAEAGSMVYYLLGKTYRGMGKNEEAVKAFEKADELMETE 990


>gi|385809655|ref|YP_005846051.1| hypothetical protein IALB_1072 [Ignavibacterium album JCM 16511]
 gi|383801703|gb|AFH48783.1| TPR repeat protein [Ignavibacterium album JCM 16511]
          Length = 471

 Score = 65.1 bits (157), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 53/190 (27%), Positives = 93/190 (48%), Gaps = 11/190 (5%)

Query: 161 DEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQRHFVVHKMIV 220
           D+  ++ P  ++ + ++G +     ++EEA+ + +K ++LNPN       +      M  
Sbjct: 64  DKLLEIFPYNSELWLKKGILLNGLMKFEEAIDSFEKALSLNPNDTETLVDKSAAEENM-- 121

Query: 221 PGDRERVEQSLKEFRNFVDTHSNVVEACTLFAQVLVDQEDFDGAEE--YFNRSIRVDPEN 278
            G  ++ E+SL   R  +D      +A   F+  L+ Q  F  AE   YF R+I++DP+ 
Sbjct: 122 -GLYQQAEESL---RKVLDIDPENEDA--FFSLGLLYQRQFKYAEAIPYFERAIKIDPDY 175

Query: 279 ASLYVHRAMLMLQARGNVDEAIKLIEKAISIDKSCMFAYETLGTIEVQRGRLEEAVKCFN 338
             +Y +      +A  N D+A++  EK +  D      +   G I V+ G+LEEAV CF+
Sbjct: 176 VEVY-YELGFCYEALNNFDKALEAYEKFLDFDPYNASGWYNKGIILVKTGKLEEAVNCFD 234

Query: 339 KALPLARDEA 348
            A  +  D A
Sbjct: 235 LATSVRDDFA 244



 Score = 54.7 bits (130), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 45/195 (23%), Positives = 89/195 (45%), Gaps = 7/195 (3%)

Query: 153 FTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQRH 212
           + +A    + A K+DP+  + YY+ G  Y     +++AL   +K +  +P  + A     
Sbjct: 158 YAEAIPYFERAIKIDPDYVEVYYELGFCYEALNNFDKALEAYEKFLDFDP--YNASGW-- 213

Query: 213 FVVHKMIVPGDRERVEQSLKEFRNFVDTHSNVVEACTLFAQVLVDQEDFDGAEEYFNRSI 272
              +K I+     ++E+++  F        +   A       L D   +  A E F++ I
Sbjct: 214 --YNKGIILVKTGKLEEAVNCFDLATSVRDDFASAWYNKGNTLADLGKYQQAIECFHKVI 271

Query: 273 RVDPENASLYVHRAMLMLQARGNVDEAIKLIEKAISIDKSCMFAYETLGTIEVQRGRLEE 332
            +DP + + + + A +  +  G + +A+K   KAI  D+    AY   G      G+ + 
Sbjct: 272 EIDPYDETAFYNLASVY-EEIGELQQAVKYYSKAIESDEEYFEAYLARGYCYDSLGKYQL 330

Query: 333 AVKCFNKALPLARDE 347
           A++ FNKA+ ++ D+
Sbjct: 331 ALRDFNKAISISSDD 345



 Score = 50.4 bits (119), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 55/238 (23%), Positives = 101/238 (42%), Gaps = 12/238 (5%)

Query: 148 HAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVA 207
            A ++F KA    ++    DP  A  +Y +G I    G+ EEA+   D   ++  +F  A
Sbjct: 187 EALNNFDKALEAYEKFLDFDPYNASGWYNKGIILVKTGKLEEAVNCFDLATSVRDDFASA 246

Query: 208 RAQRHFVVHKMIVPGDRERVEQSLKEFRNFVDTHSNVVEACTLFAQVLVDQEDFDGAEEY 267
                   +K     D  + +Q+++ F   ++       A    A V  +  +   A +Y
Sbjct: 247 W------YNKGNTLADLGKYQQAIECFHKVIEIDPYDETAFYNLASVYEEIGELQQAVKY 300

Query: 268 FNRSIRVDPENASLYVHRAMLMLQARGNVDEAIKLIEKAISIDKSCMFAYETLGTIEVQR 327
           ++++I  D E    Y+ R      + G    A++   KAISI      A+     +E   
Sbjct: 301 YSKAIESDEEYFEAYLARGYCY-DSLGKYQLALRDFNKAISISSDDPDAWRAKADLEYSL 359

Query: 328 GRLEEAVKCFNKALPLARDEAELSHIYSLRDA---AIAQMKVCERYNIKKKVSPRSQN 382
           G LEE++K + +A  L  D  ++   Y+L +    A   +   E Y+   +++P+  N
Sbjct: 360 GHLEESIKSYLEAARLQPDGYDI--WYNLAETYYEANKWLNALEAYDQCLRINPKDSN 415



 Score = 48.5 bits (114), Expect = 0.008,   Method: Compositional matrix adjust.
 Identities = 38/204 (18%), Positives = 91/204 (44%), Gaps = 8/204 (3%)

Query: 140 IKRAVVHLHAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIA 199
           +K+ ++ L+    F +A    ++A  ++PN  ++   +       G Y++A  +L K + 
Sbjct: 78  LKKGIL-LNGLMKFEEAIDSFEKALSLNPNDTETLVDKSAAEENMGLYQQAEESLRKVLD 136

Query: 200 LNPNFHVARAQRHFVVHKMIVPGDRERVEQSLKEFRNFVDTHSNVVEACTLFAQVLVDQE 259
           ++P    A      +  +        +  +++  F   +    + VE             
Sbjct: 137 IDPENEDAFFSLGLLYQRQF------KYAEAIPYFERAIKIDPDYVEVYYELGFCYEALN 190

Query: 260 DFDGAEEYFNRSIRVDPENASLYVHRAMLMLQARGNVDEAIKLIEKAISIDKSCMFAYET 319
           +FD A E + + +  DP NAS + ++ +++++  G ++EA+   + A S+      A+  
Sbjct: 191 NFDKALEAYEKFLDFDPYNASGWYNKGIILVKT-GKLEEAVNCFDLATSVRDDFASAWYN 249

Query: 320 LGTIEVQRGRLEEAVKCFNKALPL 343
            G      G+ ++A++CF+K + +
Sbjct: 250 KGNTLADLGKYQQAIECFHKVIEI 273



 Score = 45.8 bits (107), Expect = 0.064,   Method: Compositional matrix adjust.
 Identities = 45/217 (20%), Positives = 94/217 (43%), Gaps = 11/217 (5%)

Query: 129 SVDPKIKVNAHIKRAVVHLHAASD----FTKAFADLDEAEKVDPNVADSYYQRGQIYCLF 184
           S +  + +N +    +V   AA +    + +A   L +   +DP   D+++  G +Y   
Sbjct: 96  SFEKALSLNPNDTETLVDKSAAEENMGLYQQAEESLRKVLDIDPENEDAFFSLGLLYQRQ 155

Query: 185 GQYEEALRNLDKTIALNPNFHVARAQRHFVVHKMIVPGDRERVEQSLKEFRNFVDTHSNV 244
            +Y EA+   ++ I ++P++     +  F    +         +++L+ +  F+D     
Sbjct: 156 FKYAEAIPYFERAIKIDPDYVEVYYELGFCYEAL------NNFDKALEAYEKFLDFDPYN 209

Query: 245 VEACTLFAQVLVDQEDFDGAEEYFNRSIRVDPENASLYVHRAMLMLQARGNVDEAIKLIE 304
                    +LV     + A   F+ +  V  + AS + ++    L   G   +AI+   
Sbjct: 210 ASGWYNKGIILVKTGKLEEAVNCFDLATSVRDDFASAWYNKGN-TLADLGKYQQAIECFH 268

Query: 305 KAISIDKSCMFAYETLGTIEVQRGRLEEAVKCFNKAL 341
           K I ID     A+  L ++  + G L++AVK ++KA+
Sbjct: 269 KVIEIDPYDETAFYNLASVYEEIGELQQAVKYYSKAI 305


>gi|333377875|ref|ZP_08469608.1| hypothetical protein HMPREF9456_01203 [Dysgonomonas mossii DSM
           22836]
 gi|332883895|gb|EGK04175.1| hypothetical protein HMPREF9456_01203 [Dysgonomonas mossii DSM
           22836]
          Length = 316

 Score = 64.7 bits (156), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 50/175 (28%), Positives = 89/175 (50%), Gaps = 20/175 (11%)

Query: 148 HAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVA 207
            +  D + A  D  +A +++ N AD+YY RG IY + G+ E+AL + ++ I   P  +VA
Sbjct: 135 QSIGDDSLAMRDYTQAIRLNNNYADAYYNRGIIYEVGGECEKALEDYNRAIKEEPK-NVA 193

Query: 208 RAQRHFVVHKMIVPGDRERVEQSLKEFRNFVDTHSNVVE-------ACTLFAQVLVDQED 260
                       +  +R  +  S+K+    +  +S V+E       A T  A++ + +++
Sbjct: 194 D-----------IYNNRGNIYLSMKDTSKALSDYSRVLEIDTANINAYTNRAEIYILRQE 242

Query: 261 FDGAEEYFNRSIRVDPENASLYVHRAMLMLQARGNVDEAIKLIEKAISIDKSCMF 315
           FD A +  NR + +DPEN  LY  RA +  + +   DEAI   EK + +D+  ++
Sbjct: 243 FDKALDDCNRGLMLDPENIRLYYKRAAIY-ERKKEYDEAIADYEKVLDLDRHDLY 296



 Score = 52.8 bits (125), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 48/195 (24%), Positives = 86/195 (44%), Gaps = 8/195 (4%)

Query: 152 DFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQR 211
           ++ KA    D A  +D   A  YY RG IY   G    A+R+  + I LN N+  A   R
Sbjct: 105 NYKKAIECTDIAIGLDTTDATGYYNRGSIYQSIGDDSLAMRDYTQAIRLNNNYADAYYNR 164

Query: 212 HFVVHKMIVPGDRERVEQSLKEF-RNFVDTHSNVVEACTLFAQVLVDQEDFDGAEEYFNR 270
             +     V G+    E++L+++ R   +   NV +       + +  +D   A   ++R
Sbjct: 165 GIIYE---VGGE---CEKALEDYNRAIKEEPKNVADIYNNRGNIYLSMKDTSKALSDYSR 218

Query: 271 SIRVDPENASLYVHRAMLMLQARGNVDEAIKLIEKAISIDKSCMFAYETLGTIEVQRGRL 330
            + +D  N + Y +RA + +  R   D+A+    + + +D   +  Y     I  ++   
Sbjct: 219 VLEIDTANINAYTNRAEIYI-LRQEFDKALDDCNRGLMLDPENIRLYYKRAAIYERKKEY 277

Query: 331 EEAVKCFNKALPLAR 345
           +EA+  + K L L R
Sbjct: 278 DEAIADYEKVLDLDR 292


>gi|170744697|ref|YP_001773352.1| peptidase C14 caspase catalytic subunit p20 [Methylobacterium sp.
           4-46]
 gi|168198971|gb|ACA20918.1| peptidase C14 caspase catalytic subunit p20 [Methylobacterium sp.
           4-46]
          Length = 839

 Score = 64.7 bits (156), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 57/238 (23%), Positives = 106/238 (44%), Gaps = 13/238 (5%)

Query: 104 RATVYIFTSQSTKAIEDLTQLVEDTSVDPKIKVNAHIKRAVVHLHAASDFTKAFADLDEA 163
           R    +       A+ED T+     ++D K      ++   +      D+ +A ADL +A
Sbjct: 57  RGVAKVQAGDQRGAVEDFTR-----ALDRKPGFLDALRNRGIAWQMLGDYDRAVADLTQA 111

Query: 164 EKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQRHFVVHKMIVPGD 223
            ++DP  A +   RG       +Y+ A+ +    IA  P F  A A R  + H       
Sbjct: 112 LRLDPRSAATLNARGAALLSKEEYDRAITDFTAAIAREPGFFRAFANRG-LAHLA----- 165

Query: 224 RERVEQSLKEFRNFVDTHSNVVEACTLFAQVLVDQEDFDGAEEYFNRSIRVDPENASLYV 283
           + +++++L +F   +    N        A +L+D+ +FDGA   +N +IR+ P N   Y 
Sbjct: 166 KRQLDRALDDFNALIRLQPNEPIGYENRAALLIDRGEFDGAIADYNTAIRLRPRNWQAYS 225

Query: 284 HRAMLMLQARGNVDEAIKLIEKAISIDKSCMFAYETLGTIEVQRGRLEEAVKCFNKAL 341
            R     + +G V  A+   ++A+ + ++   AY     +  Q G+L+ A+   ++AL
Sbjct: 226 QRGE-AWRLKGEVQRALADHDRAVELGRTPE-AYTNRALVLKQTGQLDRALADCDEAL 281



 Score = 53.1 bits (126), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 86/406 (21%), Positives = 156/406 (38%), Gaps = 43/406 (10%)

Query: 117 AIEDLTQLVEDTSVDPKIKVNAHIKRAVVHLHAASDFTKAFADLDEAEKVDPNVADSYYQ 176
            I   T+L+ D   +P++    +  R V  + A  D   A  D   A    P   D+   
Sbjct: 33  GIPACTRLL-DQERNPEVVPGLYNNRGVAKVQA-GDQRGAVEDFTRALDRKPGFLDALRN 90

Query: 177 RGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQRHFVVHKMIVPGDRERVEQSLKEFRN 236
           RG  + + G Y+ A+ +L + + L+P        R   +        +E  ++++ +F  
Sbjct: 91  RGIAWQMLGDYDRAVADLTQALRLDPRSAATLNARGAALLS------KEEYDRAITDFTA 144

Query: 237 FVDTHSNVVEACTLFAQVLVDQEDFDGAEEYFNRSIRVDPENASLYVHRAMLMLQARGNV 296
            +        A        + +   D A + FN  IR+ P     Y +RA L++  RG  
Sbjct: 145 AIAREPGFFRAFANRGLAHLAKRQLDRALDDFNALIRLQPNEPIGYENRAALLID-RGEF 203

Query: 297 DEAIKLIEKAISIDKSCMFAYETLGTIEVQRGRLEEAVKCFNKALPLARDEAELSHIYSL 356
           D AI     AI +      AY   G     +G ++ A+   ++A+ L R        Y+ 
Sbjct: 204 DGAIADYNTAIRLRPRNWQAYSQRGEAWRLKGEVQRALADHDRAVELGR----TPEAYTN 259

Query: 357 RDAAIAQMKVCERYNIKKKVSPRSQNITKNEKLAIKQLRENNDIIIRPADKGGKTVVMDK 416
           R   + Q    +R      ++   + +  N + A+     N   I+R   + G+ +    
Sbjct: 260 RALVLKQTGQLDR-----ALADCDEALLHNPRFALAL--ANRGEILRLRGEVGRAI---- 308

Query: 417 ADYTQKMTSILNSNDYEIIPGDPTKTIEESEKYGNLENESGQKHAASDFTKAFADLDEAE 476
            D T+ +   LN       P  P       + Y     ++GQ        +A AD DEA 
Sbjct: 309 DDLTRAIA--LN-------PKSPVALTFRGDAY----RQAGQPD------RAIADYDEAL 349

Query: 477 KVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQ 522
           +  P+   ++  RG      G+   A  + ++ + L+P+   A A+
Sbjct: 350 RAVPDFVAAFAGRGLAREQRGEASLARADFERAMGLSPDRDAALAR 395



 Score = 45.8 bits (107), Expect = 0.052,   Method: Compositional matrix adjust.
 Identities = 54/206 (26%), Positives = 82/206 (39%), Gaps = 37/206 (17%)

Query: 2   FMDRGAQHAKEEISKRSFFKPSKQFIKTYLKSFPNDPILQPDGLSNGVELTNGDTNESHE 61
           F +RG  H    ++KR   +    F    ++  PN+PI    G  N   L          
Sbjct: 156 FANRGLAH----LAKRQLDRALDDF-NALIRLQPNEPI----GYENRAAL---------- 196

Query: 62  LDLLSKAKRAFEHEDYLTAIRHCTEEIESTSSNHTKALARLLRATVYIFTSQSTKAIEDL 121
             L+ + +      DY TAIR      ++ S           R   +    +  +A+ D 
Sbjct: 197 --LIDRGEFDGAIADYNTAIRLRPRNWQAYSQ----------RGEAWRLKGEVQRALAD- 243

Query: 122 TQLVEDTSVDPKIKVNAHIKRAVVHLHAASDFTKAFADLDEAEKVDPNVADSYYQRGQIY 181
                D +V+      A+  RA+V L       +A AD DEA   +P  A +   RG+I 
Sbjct: 244 ----HDRAVELGRTPEAYTNRALV-LKQTGQLDRALADCDEALLHNPRFALALANRGEIL 298

Query: 182 CLFGQYEEALRNLDKTIALNPNFHVA 207
            L G+   A+ +L + IALNP   VA
Sbjct: 299 RLRGEVGRAIDDLTRAIALNPKSPVA 324


>gi|296126637|ref|YP_003633889.1| hypothetical protein [Brachyspira murdochii DSM 12563]
 gi|296018453|gb|ADG71690.1| TPR repeat-containing protein [Brachyspira murdochii DSM 12563]
          Length = 804

 Score = 64.7 bits (156), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 54/230 (23%), Positives = 109/230 (47%), Gaps = 16/230 (6%)

Query: 116 KAIEDLTQLVEDTSVDPKIKVNAHIKRAVVHLH--AASDFTKAFADLDEAEKVDPNVADS 173
           +A+ED  + +E    D  +  N  + +  +HL+  A  DF KA +  DE        ++ 
Sbjct: 379 EALEDYNKAIELEQNDAYLYNNRALLKGRIHLYREALEDFDKAISLYDEN-------SEF 431

Query: 174 YYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQRHFVVHKMIVPGDRERVEQSLKE 233
           YY RG       +++EAL+ ++K I LN  +  A  +R  + ++       E  ++++K+
Sbjct: 432 YYFRGLTNFYLNEFDEALKYINKAIELNNEYIDAYNERAIIYYRT------ENYDEAIKD 485

Query: 234 FRNFVDTHSNVVEACTLFAQVLVDQEDFDGAEEYFNRSIRVDPENASLYVHRAMLMLQAR 293
           F+  ++  +  V A    A      ED+D A +Y+ + I +D  +   Y +RA+  ++  
Sbjct: 486 FKKVLELDNENVYAYYHLALSYECLEDYDNAVKYYTKVIELDNNSLEAYYNRALAKMEIN 545

Query: 294 GNVDEAIKLIEKAISIDKSCMFAYETLGTIEVQRGRLEEAVKCFNKALPL 343
              +EAI+  ++ I +DK    AY  +G          ++++ + K + +
Sbjct: 546 L-YNEAIEDFKRIIELDKENTDAYLNIGICYDYMEEYNKSIEYYTKVIEI 594



 Score = 60.5 bits (145), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 112/518 (21%), Positives = 211/518 (40%), Gaps = 104/518 (20%)

Query: 64  LLSKAKRAFEHEDYLTAIRHCTEEIESTSSNHTKALARLLRATVYIFT-SQSTKAIEDLT 122
           L +    AF + DY  AI +  E I+     + K +         I++ S      ED  
Sbjct: 12  LFNLGHEAFSNNDYNKAINYLDEIIDI----YNKDIIAYSDGEFIIYSDSYDDNKNEDEE 67

Query: 123 QLVEDTSVD--PKIKVNAHIKRAVVHLHAASDFTKAFADLDEAEKVDPNVADSYYQRGQI 180
           + ++D  ++      V+A+  RA+   +   ++ +A  D D+  ++ P+  D+YY RG  
Sbjct: 68  RNIDDEEINITHNTLVDAYYNRAISKFNL-KNYEEAIKDFDKVIELSPDKTDAYYNRGHS 126

Query: 181 YCLFGQYEEALRNLDKTIALNPN------------FHVAR---AQRHFVVHKMIVPGDRE 225
                +YEE + +  K +  + +            F++A    A ++F +   ++    E
Sbjct: 127 KSYLKRYEEGIEDFKKVLEFDEDDFEAVYYVGLGYFYLANYEEAIKNFDLALYLIEKTEE 186

Query: 226 ------------------RVEQSLKEFRNFV-----DTHSNVVEACTLFAQVLVDQEDFD 262
                             R E++L +F   V     D+ +   +A T F   L ++   D
Sbjct: 187 EYIADIYYYRGHSKSYLTRYEEALSDFNKLVQLREDDSEAFYFKALTEFYLGLYEEAIND 246

Query: 263 GAEEYFNRSIRVDPENASLYVHRAMLMLQARGNV---DEAIKLIEKAISID-KSCMFAYE 318
                F+ SI +D   ++ Y  R +    ++ N+   DEA +  +KAI  D ++ +  Y 
Sbjct: 247 -----FDISIELDSNASNAYYFRGL----SKSNLELYDEAREDYQKAIDFDPENIISIYN 297

Query: 319 TLGTIEVQRGRLEEAVKCFNKALPLARDEAELSHIYSLRDAAIAQMKVCER----YNIKK 374
             G IE + G  +EA+K + K +   +DE  +S+IY  R  A   +++ E     Y+   
Sbjct: 298 DAGLIEYKLGNYKEAIKYYTKIIE--KDEY-ISYIYYNRALAKEALELYEDALKDYDKAI 354

Query: 375 KVSPRSQNITKNEKLAIKQLRENNDIIIRPADKGGKTVVMDKA--DYTQKMTSILNSNDY 432
           +++P       N  L   +++                 + D+A  DY + +   L  ND 
Sbjct: 355 ELNPDDTYSYNNRGLIKNEMQ-----------------MYDEALEDYNKAIE--LEQND- 394

Query: 433 EIIPGDPTKTIEESEKYGNLENESGQKHAASDFTKAFADLDEAEKVDPNVADSYYQRGQI 492
                        +  Y N     G+ H    + +A  D D+A  +    ++ YY RG  
Sbjct: 395 -------------AYLYNNRALLKGRIHL---YREALEDFDKAISLYDENSEFYYFRGLT 438

Query: 493 YCLFGQYEEALRNLDKTIALNPNFHVARAQRHFVWTST 530
                +++EAL+ ++K I LN  +  A  +R  ++  T
Sbjct: 439 NFYLNEFDEALKYINKAIELNNEYIDAYNERAIIYYRT 476



 Score = 47.4 bits (111), Expect = 0.020,   Method: Compositional matrix adjust.
 Identities = 90/460 (19%), Positives = 186/460 (40%), Gaps = 82/460 (17%)

Query: 110 FTSQSTKAIEDLTQLVEDTSVDPKIKVNAHIKRAVVHLHAASDFTKAFADLDEAEKVDPN 169
           + ++  +A+ D  +LV+    D +    A   +A+   +    + +A  D D + ++D N
Sbjct: 202 YLTRYEEALSDFNKLVQLREDDSE----AFYFKALTEFYLGL-YEEAINDFDISIELDSN 256

Query: 170 VADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQRHFVVHKMIVPGDRERVEQ 229
            +++YY RG        Y+EA  +  K I  +P   ++            +  D   +E 
Sbjct: 257 ASNAYYFRGLSKSNLELYDEAREDYQKAIDFDPENIIS------------IYNDAGLIEY 304

Query: 230 SLKEFRNFVDTHSNVVEACTLFAQVLVDQ-------EDFDGAEEYFNRSIRVDPENASLY 282
            L  ++  +  ++ ++E     + +  ++       E ++ A + ++++I ++P++   Y
Sbjct: 305 KLGNYKEAIKYYTKIIEKDEYISYIYYNRALAKEALELYEDALKDYDKAIELNPDDTYSY 364

Query: 283 VHRAMLMLQARGNVDEAIKLIEKAISIDKSCMFAYETLGTIEVQRGRLEEAVKCFNKALP 342
            +R ++  + +   DEA++   KAI ++++  + Y     ++ +     EA++ F+KA+ 
Sbjct: 365 NNRGLIKNEMQM-YDEALEDYNKAIELEQNDAYLYNNRALLKGRIHLYREALEDFDKAIS 423

Query: 343 LARDEAELSHIYSLRDAAIAQMKVCERYNIKKKVSPRSQNI-TKNEKLAIKQLRENNDII 401
           L  + +E  +   L +  + +     +Y I K +   ++ I   NE+  I    EN D  
Sbjct: 424 LYDENSEFYYFRGLTNFYLNEFDEALKY-INKAIELNNEYIDAYNERAIIYYRTENYDEA 482

Query: 402 IRPADKGGKTVVMDKAD---YTQKMTSILNSNDYEIIPGDPTKTIEESEKYGNLENESGQ 458
           I+      K + +D  +   Y     S     DY+      TK IE       L+N S +
Sbjct: 483 IKDF---KKVLELDNENVYAYYHLALSYECLEDYDNAVKYYTKVIE-------LDNNSLE 532

Query: 459 KH---------------AASDF----------TKAFAD-------LDEAEK--------- 477
            +               A  DF          T A+ +       ++E  K         
Sbjct: 533 AYYNRALAKMEINLYNEAIEDFKRIIELDKENTDAYLNIGICYDYMEEYNKSIEYYTKVI 592

Query: 478 -VDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNF 516
            +D    D+YY RG        Y EA  +  + I +N N+
Sbjct: 593 EIDNKALDAYYNRGLSKVALKLYNEAFEDFIRAIDINSNY 632



 Score = 40.8 bits (94), Expect = 1.8,   Method: Compositional matrix adjust.
 Identities = 68/300 (22%), Positives = 123/300 (41%), Gaps = 74/300 (24%)

Query: 75  EDYLTAIRHCTEEIE----STSSNHTKALARLLRATVYIFTSQSTKAIEDLTQLVEDTSV 130
           EDY  A+++ T+ IE    S  + + +ALA++    +Y       +AIED  +++E   +
Sbjct: 511 EDYDNAVKYYTKVIELDNNSLEAYYNRALAKM-EINLY------NEAIEDFKRIIE---L 560

Query: 131 DPKIKVNAHIKRAVVHLHAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEA 190
           D +   +A++   + + +   ++ K+     +  ++D    D+YY RG        Y EA
Sbjct: 561 DKE-NTDAYLNIGICYDYM-EEYNKSIEYYTKVIEIDNKALDAYYNRGLSKVALKLYNEA 618

Query: 191 LRNLDKTIALNPNFHVARAQRHFVVHKMIVPGDRERVEQSLKEFRNFVDTHSNVVEACTL 250
             +  + I +N N+  A     F            + + S  E +       N+ +A  L
Sbjct: 619 FEDFIRAIDINSNYLNAYNGIGF-----------SKTKYSNNELK-----KGNINKAIEL 662

Query: 251 FAQVLVDQEDFDGAEEYFNRSIRVDPE----NASLYVHRAMLMLQARGNVDEAIKLIEKA 306
               LV          Y+N+ + +D +    NAS+Y              D     I K 
Sbjct: 663 LNDALV----------YYNKGLALDIDDNITNASIY--------------DSMGYTITKL 698

Query: 307 ISIDKSCMFAYETLGTIEVQRGRLEEAVKCFNKALPLARDEAELSHIYSLRDAAIAQMKV 366
            +I       Y+T+   E      +EA+ CFN+A+ L    A L+H       +IA +K+
Sbjct: 699 ANI-------YQTMNDKENALKYYDEALFCFNEAIKLNNKHA-LAH------NSIAYIKI 744


>gi|224588264|gb|ACN58888.1| TPR repeat protein [uncultured bacterium BLR13]
          Length = 746

 Score = 64.7 bits (156), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 77/363 (21%), Positives = 151/363 (41%), Gaps = 42/363 (11%)

Query: 144 VVHLHAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPN 203
            V L A      A    D+A +++     ++  R  ++    +Y  AL+++++ +ALNP+
Sbjct: 128 AVALQALQRQEDALHSYDQALELNAGDDQAWNNRAVVFQQTKRYAAALQSVEQALALNPH 187

Query: 204 FHVARAQRHFVVHKMIVPGDRERVEQSLKEFRNFVDTHSNVVEACTLFAQVLVDQEDFDG 263
              A   R  ++ ++       R++++ + +R  ++      +A     ++L+ +E F+ 
Sbjct: 188 NVEAYNNRGNILREL------GRLDEAGESYRRALELVPQYADAHCNLGRLLLSRERFED 241

Query: 264 AEEYFNRSIRVDPENASLYVHRAMLMLQARGNVDEAIKLIEKAISIDKSCMFAYETLGTI 323
           A + ++++I +DP+ A  Y HRA ++L+     ++A++  E A  + +    AY  LG  
Sbjct: 242 ALQCYDQAIGLDPQLAQAYRHRA-IVLRKLNRTEDALRDNETASGLQRELTDAYCKLGKE 300

Query: 324 EVQRGRLEEAVKCFNKALPLARDEAELSHIYSLRDAAIAQMKVCERYNIKKKVSPRSQNI 383
             ++GR E A       L L   ++         DA I Q+              R  N 
Sbjct: 301 LREQGRPESAAGVIAALLKLDGSDS---------DAGIWQLHA------------RMLNA 339

Query: 384 TKNEKLAIKQLRENNDIIIRPADKGGKTVVMDKADYTQKMTSILNSN-DYEIIPGDPTKT 442
               + A+  +     + ++P          D  DY     +IL +   YE       K 
Sbjct: 340 AGRHEDALASI--GRALALKP----------DSGDYHLTRGAILRATLQYEAARQCYEKA 387

Query: 443 IEESEKY-GNLENESGQKHAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEE 501
           +E + ++ G   N             A  + D A  +DP+ A +++ RG +Y   G YE 
Sbjct: 388 VELAPRHPGGYTNLGSVLDQMGHAGLALKNYDHAIALDPDCAPAHWNRGLVYLRQGDYER 447

Query: 502 ALR 504
             R
Sbjct: 448 GWR 450



 Score = 57.4 bits (137), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 81/387 (20%), Positives = 154/387 (39%), Gaps = 24/387 (6%)

Query: 151 SDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQ 210
            +F  A   +  A  VDP+ A ++   G         E+ALR+ D+ + L          
Sbjct: 67  GNFDMAAGFIRSALTVDPDHAGAHGDLGNALREMQHLEDALRSYDRALELTGGDADTYYN 126

Query: 211 RHFVVHKMIVPGDRERVEQSLKEFRNFVDTHSNVVEACTLFAQVLVDQEDFDGAEEYFNR 270
           R   +  +      +R E +L  +   ++ ++   +A    A V    + +  A +   +
Sbjct: 127 RAVALQAL------QRQEDALHSYDQALELNAGDDQAWNNRAVVFQQTKRYAAALQSVEQ 180

Query: 271 SIRVDPENASLYVHRAMLMLQARGNVDEAIKLIEKAISIDKSCMFAYETLGTIEVQRGRL 330
           ++ ++P N   Y +R  + L+  G +DEA +   +A+ +      A+  LG + + R R 
Sbjct: 181 ALALNPHNVEAYNNRGNI-LRELGRLDEAGESYRRALELVPQYADAHCNLGRLLLSRERF 239

Query: 331 EEAVKCFNKALPLARDEAELSHIYSLRDAAIAQMKVCE-RYNIKKKVSPRSQNITKNEKL 389
           E+A++C+++A+ L   + +L+  Y  R   + ++   E      +  S   + +T     
Sbjct: 240 EDALQCYDQAIGL---DPQLAQAYRHRAIVLRKLNRTEDALRDNETASGLQRELTDAYCK 296

Query: 390 AIKQLRENNDIIIRPADKGGKTVVMDKADYTQKMTSILNSNDYEI-IPGDPTKTIEESEK 448
             K+LRE      RP    G    + K D +     I   +   +   G     +    +
Sbjct: 297 LGKELREQG----RPESAAGVIAALLKLDGSDSDAGIWQLHARMLNAAGRHEDALASIGR 352

Query: 449 YGNLENESGQKH--------AASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYE 500
              L+ +SG  H        A   +  A    ++A ++ P     Y   G +    G   
Sbjct: 353 ALALKPDSGDYHLTRGAILRATLQYEAARQCYEKAVELAPRHPGGYTNLGSVLDQMGHAG 412

Query: 501 EALRNLDKTIALNPNFHVARAQRHFVW 527
            AL+N D  IAL+P+   A   R  V+
Sbjct: 413 LALKNYDHAIALDPDCAPAHWNRGLVY 439


>gi|427710144|ref|YP_007052521.1| hypothetical protein Nos7107_4853 [Nostoc sp. PCC 7107]
 gi|427362649|gb|AFY45371.1| Tetratricopeptide TPR_1 repeat-containing protein [Nostoc sp. PCC
           7107]
          Length = 714

 Score = 64.7 bits (156), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 49/226 (21%), Positives = 109/226 (48%), Gaps = 8/226 (3%)

Query: 118 IEDLTQLVEDTSVDPKIKVNAHIKRAVVHLHAASDFTKAFADLDEAEKVDPNVADSYYQR 177
           ++++T+  E  + +P++ V A++++    L A   +  A A  ++A K+ P  A ++ +R
Sbjct: 468 LQEITESKEQQTPEPQVSVEANLQQGD-DLFAQRQYEDAIACYNQAVKIQPENATAWLKR 526

Query: 178 GQIYCLFGQYEEALRNLDKTIALNPNFHVARAQRHFVVHKMIVPGDRERVEQSLKEFRNF 237
           G  +    +Y++A+ + D++I L P++H A   R       +  G+  + +Q+   F   
Sbjct: 527 GLTFARLKRYQDAIASYDQSIKLQPDYHQAWCDRG------VAFGNLRQHKQAFACFNKA 580

Query: 238 VDTHSNVVEACTLFAQVLVDQEDFDGAEEYFNRSIRVDPENASLYVHRAMLMLQARGNVD 297
                +   A    A  L++ ++++ A   F +++   PE+  L+  R   +++  G  D
Sbjct: 581 TKIKPDDATAWLNRALSLIELDEYEEALASFEQALTFQPESPKLWDKRGYTLVRL-GLDD 639

Query: 298 EAIKLIEKAISIDKSCMFAYETLGTIEVQRGRLEEAVKCFNKALPL 343
           +AI    +AI+I      AY         + + E A++C  +A+ +
Sbjct: 640 DAIAAFNQAIAIKPDYAIAYYNKAACYALQKQAELAIECLQQAIEI 685



 Score = 40.0 bits (92), Expect = 2.8,   Method: Compositional matrix adjust.
 Identities = 18/63 (28%), Positives = 35/63 (55%)

Query: 461 AASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVAR 520
           A   +  A A  ++A K+ P  A ++ +RG  +    +Y++A+ + D++I L P++H A 
Sbjct: 498 AQRQYEDAIACYNQAVKIQPENATAWLKRGLTFARLKRYQDAIASYDQSIKLQPDYHQAW 557

Query: 521 AQR 523
             R
Sbjct: 558 CDR 560


>gi|423334402|ref|ZP_17312181.1| pentatricopeptide repeat domain-containing protein [Parabacteroides
           distasonis CL03T12C09]
 gi|409225593|gb|EKN18511.1| pentatricopeptide repeat domain-containing protein [Parabacteroides
           distasonis CL03T12C09]
          Length = 321

 Score = 64.7 bits (156), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 51/189 (26%), Positives = 91/189 (48%), Gaps = 17/189 (8%)

Query: 101 RLLRATVYIFTSQSTKAIEDLTQLVEDTSVDPKIKVNAHIKRAVVHLHAASDFTKAFADL 160
           RL R  +     +  + I D   ++E   ++P   V A+   A     A +D   A ADL
Sbjct: 99  RLTRVNLLFMLDKDAEVITDCLHVIE---LEPSNHV-AYFMMAKAK-KATNDVFGAIADL 153

Query: 161 DEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNP---NFHVARAQRHFVVHK 217
             +  +  + ADSY  R +I    GQ +EAL +++K I + P   + ++ R + H  +  
Sbjct: 154 TRSISLKEDFADSYLLRAEILLGLGQAKEALPDVEKAIEIVPEEESSYLLRGRIHMAL-- 211

Query: 218 MIVPGDRERVEQSLKEFRNFVDTHSNVVEACTLFAQVLVDQEDFDGAEEYFNRSIRVDPE 277
               GD   +E +  +F+  +D +    +AC L  Q+L++Q+ +D A  +F+ +I ++P 
Sbjct: 212 ----GD---IEAANSDFQQVLDLNPFNEDACILSGQLLIEQKKYDEAIAFFDEAIEMNPS 264

Query: 278 NASLYVHRA 286
            A  Y  R 
Sbjct: 265 FAKAYSERG 273


>gi|354566048|ref|ZP_08985221.1| Tetratricopeptide TPR_1 repeat-containing protein [Fischerella sp.
           JSC-11]
 gi|353546556|gb|EHC16004.1| Tetratricopeptide TPR_1 repeat-containing protein [Fischerella sp.
           JSC-11]
          Length = 357

 Score = 64.7 bits (156), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 48/228 (21%), Positives = 107/228 (46%), Gaps = 8/228 (3%)

Query: 122 TQLVEDTSVDPKIKVNAHIKRAVVHLHAASDFTKAFADLDEAEKVDPNVADSYYQRGQIY 181
           ++L+    V   ++  ++ ++ V+  H   DF+ A +   +A ++D N+A ++   G I 
Sbjct: 32  SKLLAQNVVSQNLEAASYFQQGVMRYHH-QDFSGAESAFRQALQIDSNIAAAHNYLGNIM 90

Query: 182 CLFGQYEEALRNLDKTIALNPNFHVARAQRHFVVHKMIVPGDRERVEQSLKEFRNFVDTH 241
               +++ A++   + I LNPN   A       +HK      R + + ++  +R  +  +
Sbjct: 91  LQQSRFDAAVQEYAEAIKLNPNLGEAYYNLGLALHK------RGQADAAITAYRQALIIN 144

Query: 242 SNVVEACTLFAQVLVDQEDFDGAEEYFNRSIRVDPENASLYVHRAMLMLQARGNVDEAIK 301
             +  A       L ++   + A   + ++I ++  NA+ Y + A + LQ +G ++EAI 
Sbjct: 145 PTMANAQYNLGLALYEKGQANEAIAAYQQAINLNSNNANAYFNLA-IALQEQGKLEEAIA 203

Query: 302 LIEKAISIDKSCMFAYETLGTIEVQRGRLEEAVKCFNKALPLARDEAE 349
              + + ++     AY  +G++   +G+  EAV  +  A+    + AE
Sbjct: 204 AYRQTLKLNPDNAVAYNNMGSLLTIQGQTSEAVATYQTAIKRIPNNAE 251


>gi|386002441|ref|YP_005920740.1| putative membrane protein, containing TPR repeats [Methanosaeta
           harundinacea 6Ac]
 gi|357210497|gb|AET65117.1| putative membrane protein, containing TPR repeats [Methanosaeta
           harundinacea 6Ac]
          Length = 460

 Score = 64.7 bits (156), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 54/239 (22%), Positives = 107/239 (44%), Gaps = 20/239 (8%)

Query: 107 VYIFTSQSTKAIEDLTQLVEDTSVDPKIKVNAHIKRAVVHLHAA----SDFTKAFADLDE 162
           V++F +Q  K I+  ++L         +K+N        +L  A        K+   LD+
Sbjct: 132 VFLFKTQYRKVIQLSSKL---------LKLNPTTASTYENLAEAYRMLGQIDKSLECLDK 182

Query: 163 AEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQRHFVVHKMIVPG 222
           A ++DP  A S++  G      G+ +EAL+  +K I  +P    A A   + ++ +    
Sbjct: 183 AIELDPQAARSWFNMGLALDDLGRKDEALKAFEKAIETDPEDAAAWANNGYALYYL---- 238

Query: 223 DRERVEQSLKEFRNFVDTHSNVVEACTLFAQVLVDQEDFDGAEEYFNRSIRVDPENASLY 282
              R+E+SLK     ++      EA T  +  L        + E   +++ ++P+ A  +
Sbjct: 239 --GRIEESLKASEKAIEFDPQAAEAWTNKSSALAQMGRIKESLEASEKAVNLNPKLAMAW 296

Query: 283 VHRAMLMLQARGNVDEAIKLIEKAISIDKSCMFAYETLGTIEVQRGRLEEAVKCFNKAL 341
            ++  ++       +EAI+ +++AI +D     A+   G      GR+E+A+  + KA+
Sbjct: 297 NNKGSVLYDL-DRAEEAIEALDRAIELDPKLAMAWSNKGVALGSLGRMEDALDAYEKAI 354



 Score = 61.6 bits (148), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 46/204 (22%), Positives = 98/204 (48%), Gaps = 10/204 (4%)

Query: 165 KVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQRHFVVHKMIVPGDR 224
           K++P  A +Y    + Y + GQ +++L  LDK I L+P     +A R +    + +  D 
Sbjct: 151 KLNPTTASTYENLAEAYRMLGQIDKSLECLDKAIELDP-----QAARSWFNMGLAL-DDL 204

Query: 225 ERVEQSLKEFRNFVDTHSNVVEACTLFAQVLVDQEDFDGAEEYFNRSIRVDPENASLYVH 284
            R +++LK F   ++T      A       L      + + +   ++I  DP+ A  + +
Sbjct: 205 GRKDEALKAFEKAIETDPEDAAAWANNGYALYYLGRIEESLKASEKAIEFDPQAAEAWTN 264

Query: 285 RAMLMLQARGNVDEAIKLIEKAISIDKSCMFAYETLGTIEVQRGRLEEAVKCFNKALPLA 344
           ++  + Q  G + E+++  EKA++++     A+   G++     R EEA++  ++A+ L 
Sbjct: 265 KSSALAQM-GRIKESLEASEKAVNLNPKLAMAWNNKGSVLYDLDRAEEAIEALDRAIEL- 322

Query: 345 RDEAELSHIYSLRDAAIAQMKVCE 368
             + +L+  +S +  A+  +   E
Sbjct: 323 --DPKLAMAWSNKGVALGSLGRME 344



 Score = 53.9 bits (128), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 44/152 (28%), Positives = 72/152 (47%), Gaps = 16/152 (10%)

Query: 240 THSNVVEACTLFAQVLVDQEDFDGAEEYFNRSIRVDPENASLYVHRAMLMLQARGNVDEA 299
           T+ N+ EA  +  Q+       D + E  +++I +DP+ A  + +   L L   G  DEA
Sbjct: 159 TYENLAEAYRMLGQI-------DKSLECLDKAIELDPQAARSWFNMG-LALDDLGRKDEA 210

Query: 300 IKLIEKAISIDKSCMFAYETLGTIEVQRGRLEEAVKCFNKALPLARDEAELSHIYSLRDA 359
           +K  EKAI  D     A+   G      GR+EE++K   KA+      AE    ++ + +
Sbjct: 211 LKAFEKAIETDPEDAAAWANNGYALYYLGRIEESLKASEKAIEFDPQAAE---AWTNKSS 267

Query: 360 AIAQMKVCERYNIKKKVSPRSQNITKNEKLAI 391
           A+AQM       IK+ +    + +  N KLA+
Sbjct: 268 ALAQMG-----RIKESLEASEKAVNLNPKLAM 294


>gi|145522285|ref|XP_001446990.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
 gi|124414483|emb|CAK79593.1| unnamed protein product [Paramecium tetraurelia]
          Length = 1362

 Score = 64.7 bits (156), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 90/411 (21%), Positives = 167/411 (40%), Gaps = 52/411 (12%)

Query: 129 SVDPKIKVNAH----IKRAVVHLHAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLF 184
           + D  I++N       K   + L   + F +A  + D A + +P  +D YY +       
Sbjct: 153 NYDSAIQLNPENSDIYKCKAITLSKMNRFEEALENYDSAIQKNPENSDYYYGKAITLSKM 212

Query: 185 GQYEEALRNLDKTIALNPNFHVARAQRHFVVHKMIVPGDRERVEQSLKEFRNFVDTHSNV 244
            ++EEAL+N D  I  N           F   K I      R E++L+ + + +  +   
Sbjct: 213 NRFEEALKNYDSAIQKN------LENSDFYYGKAITLSKMNRFEEALENYDSAIQKNPEK 266

Query: 245 VEACTLFAQVLVDQEDFDGAEEYFNRSIRVDPENASLYVHRAMLMLQARGNVDEAIKLIE 304
            +     A  L     F+ A EY++ +I+ +PEN+  Y  +A + L      +EA++  +
Sbjct: 267 SDFYYGKAITLSKMNRFEEALEYYDSAIQKNPENSEFYYGKA-ITLDEMNRFEEALENYD 325

Query: 305 KAISIDKSCMFAYETLGTIEVQRGRLEEAVKCFNKALPLARDEAELSHIYSLRDAAIAQM 364
            AI  +      Y        +  R EEA++ ++ A+   +   E S  Y  +   + +M
Sbjct: 326 SAIQNNPDNSDFYYGKAITLSKMNRFEEALENYDSAI---QKNPENSDYYYGKAITLDEM 382

Query: 365 ----KVCERYNIKKKVSPRSQNITKNEKLAIKQLR------ENNDIIIR--PADKG---G 409
               +  E Y+   + +P + +    + + + ++       EN D  I+  P +     G
Sbjct: 383 NRFEEALENYDSAIQKNPENSDFYYGKAITLSKMNRFEEALENYDSAIQKNPENSDFYYG 442

Query: 410 KTVVMDKADYTQKMTSILNSNDYEIIPGDPTKTIEESEKYGNLENESGQKHAA------S 463
           K + +D+ +   +    L + D+ I              Y NLEN       A      +
Sbjct: 443 KAITLDEMN---RFEEALENYDFAI--------------YKNLENSDFYYGKAITLSKMN 485

Query: 464 DFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNP 514
            F +A    D+A   +P  +D Y  +        ++EEAL+N D+ I+ NP
Sbjct: 486 RFEEALEYYDQAISKNPEKSDIYKCKATTLSKMNRFEEALKNYDQAISKNP 536



 Score = 63.2 bits (152), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 90/396 (22%), Positives = 164/396 (41%), Gaps = 53/396 (13%)

Query: 144 VVHLHAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPN 203
            + L   + F +A  + D A + +P+ +D YY +        ++EEAL N D  I  NP 
Sbjct: 308 AITLDEMNRFEEALENYDSAIQNNPDNSDFYYGKAITLSKMNRFEEALENYDSAIQKNP- 366

Query: 204 FHVARAQRHFVVHKMIVPGDRERVEQSLKEFRNFVDTHSNVVEACTLFAQVLVDQEDFDG 263
                    +   K I   +  R E++L+ + + +  +    +     A  L     F+ 
Sbjct: 367 -----ENSDYYYGKAITLDEMNRFEEALENYDSAIQKNPENSDFYYGKAITLSKMNRFEE 421

Query: 264 AEEYFNRSIRVDPENASLYVHRAMLMLQARGNVDEAIKLIEKAISID-KSCMFAYETLGT 322
           A E ++ +I+ +PEN+  Y  +A + L      +EA++  + AI  + ++  F Y    T
Sbjct: 422 ALENYDSAIQKNPENSDFYYGKA-ITLDEMNRFEEALENYDFAIYKNLENSDFYYGKAIT 480

Query: 323 IEVQRGRLEEAVKCFNKALPLARDEAELSHIYSLRDAAIAQM---------------KVC 367
           +  +  R EEA++ +++A+       E S IY  +   +++M               K  
Sbjct: 481 L-SKMNRFEEALEYYDQAIS---KNPEKSDIYKCKATTLSKMNRFEEALKNYDQAISKNP 536

Query: 368 ERYNIKKKVSPRSQNITKNEKL---------AIKQLRENNDIIIRPADKGGKTVVMDKAD 418
           E+ ++ K    R+  ++K  K          AI++  EN+DI        GK + +D+ +
Sbjct: 537 EKSDLYKCKDFRANTLSKMNKFEEALEYYDSAIQKNPENSDIYY------GKAITLDEMN 590

Query: 419 YTQKMTSILNSNDYEIIPGDPTKTIEESEKYGNLENESGQKHAASDFTKAFADLDEAEKV 478
              +    L + D  I      +       YG     S        F +A  + D A + 
Sbjct: 591 ---RFEEALENYDSAIQKNPENQYF----YYGKATTLSKMNR----FEEALENYDSAIQK 639

Query: 479 DPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNP 514
           +P   D YY +        ++EEAL+N D+ I  NP
Sbjct: 640 NPEKYDFYYGKAITLDEMNRFEEALQNYDQAIQKNP 675



 Score = 62.4 bits (150), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 85/372 (22%), Positives = 154/372 (41%), Gaps = 42/372 (11%)

Query: 144 VVHLHAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPN 203
            + L   + F +A  + D A   +P  +D YY +        ++EEAL N D  I  NP 
Sbjct: 36  AIILSKMNRFEEALKNYDSAIYKNPENSDFYYGKAITLDQMNRFEEALENYDSAIQKNP- 94

Query: 204 FHVARAQRHFVVHKMIVPGDRERVEQSLKEFRNFVDTHSNVVEACTLFAQVLVDQEDFDG 263
                 +  F   K I      R E++L+ + + +  +    +     A  L +   F+ 
Sbjct: 95  -----EKSDFYYGKAITLSKMNRFEEALENYDSAIQKNLEKYDFYYGKAITLDEMNRFEE 149

Query: 264 AEEYFNRSIRVDPENASLYVHRAMLMLQARGNVDEAIKLIEKAISIDKSCMFAYETLGTI 323
           A E ++ +I+++PEN+ +Y  +A + L      +EA++  + AI  +      Y      
Sbjct: 150 ALENYDSAIQLNPENSDIYKCKA-ITLSKMNRFEEALENYDSAIQKNPENSDYYYGKAIT 208

Query: 324 EVQRGRLEEAVKCFNKALPLARDEAELSHIYSLRDAAIAQMKVCERYNIKKKVSPRSQNI 383
             +  R EEA+K ++ A+   +   E S  Y  +   +++M              R +  
Sbjct: 209 LSKMNRFEEALKNYDSAI---QKNLENSDFYYGKAITLSKMN-------------RFEEA 252

Query: 384 TKNEKLAIKQLRENNDIIIRPADKGGKTVVMDKADYTQKMTSILNSNDYEIIPGDPTKTI 443
            +N   AI++  E +D         GK + + K +  ++     +S     I  +P    
Sbjct: 253 LENYDSAIQKNPEKSDFYY------GKAITLSKMNRFEEALEYYDS----AIQKNP---- 298

Query: 444 EESE-KYGNLENESGQKHAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEA 502
           E SE  YG    ++      + F +A  + D A + +P+ +D YY +        ++EEA
Sbjct: 299 ENSEFYYG----KAITLDEMNRFEEALENYDSAIQNNPDNSDFYYGKAITLSKMNRFEEA 354

Query: 503 LRNLDKTIALNP 514
           L N D  I  NP
Sbjct: 355 LENYDSAIQKNP 366



 Score = 61.6 bits (148), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 92/397 (23%), Positives = 170/397 (42%), Gaps = 41/397 (10%)

Query: 144 VVHLHAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPN 203
            + L   + F +A  + D A + +P  +D YY +        ++EEAL N D  I  N  
Sbjct: 70  AITLDQMNRFEEALENYDSAIQKNPEKSDFYYGKAITLSKMNRFEEALENYDSAIQKN-- 127

Query: 204 FHVARAQRHFVVHKMIVPGDRERVEQSLKEFRNFVDTHSNVVEACTLFAQVLVDQEDFDG 263
                 +  F   K I   +  R E++L+ + + +  +    +     A  L     F+ 
Sbjct: 128 ----LEKYDFYYGKAITLDEMNRFEEALENYDSAIQLNPENSDIYKCKAITLSKMNRFEE 183

Query: 264 AEEYFNRSIRVDPENASLYVHRAMLMLQARGNVDEAIKLIEKAISID-KSCMFAYETLGT 322
           A E ++ +I+ +PEN+  Y  +A + L      +EA+K  + AI  + ++  F Y    T
Sbjct: 184 ALENYDSAIQKNPENSDYYYGKA-ITLSKMNRFEEALKNYDSAIQKNLENSDFYYGKAIT 242

Query: 323 IEVQRGRLEEAVKCFNKALPLARDEAELSHIYSLRDAAIAQM----KVCERYNIKKKVSP 378
           +  +  R EEA++ ++ A+   +   E S  Y  +   +++M    +  E Y+   + +P
Sbjct: 243 L-SKMNRFEEALENYDSAI---QKNPEKSDFYYGKAITLSKMNRFEEALEYYDSAIQKNP 298

Query: 379 RS------QNITKNEKLAIKQLRENNDIIIR--PADKG---GKTVVMDKADYTQKMTSIL 427
            +      + IT +E    ++  EN D  I+  P +     GK + + K +   +    L
Sbjct: 299 ENSEFYYGKAITLDEMNRFEEALENYDSAIQNNPDNSDFYYGKAITLSKMN---RFEEAL 355

Query: 428 NSNDYEIIPGDPTKTIEESEKYGNLENESGQKHAASDFTKAFADLDEAEKVDPNVADSYY 487
            + D  I      K  E S+ Y     ++      + F +A  + D A + +P  +D YY
Sbjct: 356 ENYDSAI-----QKNPENSDYYY---GKAITLDEMNRFEEALENYDSAIQKNPENSDFYY 407

Query: 488 QRGQIYCLFGQYEEALRNLDKTIALNP---NFHVARA 521
            +        ++EEAL N D  I  NP   +F+  +A
Sbjct: 408 GKAITLSKMNRFEEALENYDSAIQKNPENSDFYYGKA 444



 Score = 53.9 bits (128), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 83/349 (23%), Positives = 151/349 (43%), Gaps = 56/349 (16%)

Query: 185 GQYEEALRNLDKTIALNP---NFHVARAQRHFVVHKMIVPGDRERVEQSLKEFRNFVDTH 241
            +YEEAL+N D  I  NP   +F+  +          I+     R E++LK + + +  +
Sbjct: 4   NRYEEALKNYDSAIQKNPENSDFYYGKGYNLLA----IILSKMNRFEEALKNYDSAI--Y 57

Query: 242 SNVVEACTLFAQ-VLVDQED-FDGAEEYFNRSIRVDPENASLYVHRAMLMLQARGNVDEA 299
            N   +   + + + +DQ + F+ A E ++ +I+ +PE +  Y  +A + L      +EA
Sbjct: 58  KNPENSDFYYGKAITLDQMNRFEEALENYDSAIQKNPEKSDFYYGKA-ITLSKMNRFEEA 116

Query: 300 IKLIEKAISID-KSCMFAYETLGTIEVQRGRLEEAVKCFNKALPLARDEAELSHIYSLRD 358
           ++  + AI  + +   F Y    T++ +  R EEA++ ++ A+ L     E S IY  + 
Sbjct: 117 LENYDSAIQKNLEKYDFYYGKAITLD-EMNRFEEALENYDSAIQL---NPENSDIYKCKA 172

Query: 359 AAIAQMKVCERYNIKKKVSPRSQNITKNEKLAIKQLRENNDIIIRPADKGGKTVVMDKAD 418
             +++M              R +   +N   AI++  EN+D         GK + + K +
Sbjct: 173 ITLSKMN-------------RFEEALENYDSAIQKNPENSDYYY------GKAITLSKMN 213

Query: 419 YTQKMTSILNSNDYEIIPGDPTKTIEESEKYGNLENESGQKHAASD---FTKAFADLDEA 475
              +    L + D  I      K +E S+ Y       G+    S    F +A  + D A
Sbjct: 214 ---RFEEALKNYDSAI-----QKNLENSDFY------YGKAITLSKMNRFEEALENYDSA 259

Query: 476 EKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNP---NFHVARA 521
            + +P  +D YY +        ++EEAL   D  I  NP    F+  +A
Sbjct: 260 IQKNPEKSDFYYGKAITLSKMNRFEEALEYYDSAIQKNPENSEFYYGKA 308



 Score = 53.5 bits (127), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 83/377 (22%), Positives = 153/377 (40%), Gaps = 48/377 (12%)

Query: 153 FTKAFADLDEAEKVDPNVADSYYQRGQ-----IYCLFGQYEEALRNLDKTIALNPNFHVA 207
           + +A  + D A + +P  +D YY +G      I     ++EEAL+N D  I  NP     
Sbjct: 6   YEEALKNYDSAIQKNPENSDFYYGKGYNLLAIILSKMNRFEEALKNYDSAIYKNP----- 60

Query: 208 RAQRHFVVHKMIVPGDRERVEQSLKEFRNFVDTHSNVVEACTLFAQVLVDQEDFDGAEEY 267
                F   K I      R E++L+ + + +  +    +     A  L     F+ A E 
Sbjct: 61  -ENSDFYYGKAITLDQMNRFEEALENYDSAIQKNPEKSDFYYGKAITLSKMNRFEEALEN 119

Query: 268 FNRSIRVDPENASLYVHRAMLMLQARGNVDEAIKLIEKAISIDKSCMFAYETLGTIEVQR 327
           ++ +I+ + E    Y  +A + L      +EA++  + AI ++      Y+       + 
Sbjct: 120 YDSAIQKNLEKYDFYYGKA-ITLDEMNRFEEALENYDSAIQLNPENSDIYKCKAITLSKM 178

Query: 328 GRLEEAVKCFNKALPLARDEAELSHIYSLRDAAIAQMKVCERYNIKKKVSPRSQNITKNE 387
            R EEA++ ++ A+   +   E S  Y  +   +++M              R +   KN 
Sbjct: 179 NRFEEALENYDSAI---QKNPENSDYYYGKAITLSKMN-------------RFEEALKNY 222

Query: 388 KLAIKQLRENNDIIIRPADKGGKTVVMDKADYTQKMTSILNSNDYEIIPGDPTKTIEESE 447
             AI++  EN+D         GK + + K +  ++     +S     I  +P K+     
Sbjct: 223 DSAIQKNLENSDFYY------GKAITLSKMNRFEEALENYDS----AIQKNPEKS---DF 269

Query: 448 KYGNLENESGQKHAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLD 507
            YG    ++      + F +A    D A + +P  ++ YY +        ++EEAL N D
Sbjct: 270 YYG----KAITLSKMNRFEEALEYYDSAIQKNPENSEFYYGKAITLDEMNRFEEALENYD 325

Query: 508 KTIALNP---NFHVARA 521
             I  NP   +F+  +A
Sbjct: 326 SAIQNNPDNSDFYYGKA 342



 Score = 52.4 bits (124), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 47/200 (23%), Positives = 91/200 (45%), Gaps = 11/200 (5%)

Query: 144  VVHLHAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPN 203
             + L   S   +A  + D+A + +P  +  YY +        ++EEAL N D  I  NP 
Sbjct: 1131 AITLQKMSRLEEALENYDKAIQQNPEDSRYYYNKATTLNNMNRFEEALENYDSAIQKNP- 1189

Query: 204  FHVARAQRHFVVHKMIVPGDRERVEQSLKEFRNFVDTHSNVVEACTLF--AQVLVDQEDF 261
                     +  +K I      R+E++L+ + + +    N  ++   F  A  L     +
Sbjct: 1190 -----EDSRYYFNKAITLNTMNRLEKALENYDSAI--QKNPEDSRYYFNKAITLNKMNRY 1242

Query: 262  DGAEEYFNRSIRVDPENASLYVHRAMLMLQARGNVDEAIKLIEKAISIDKSCMFAYETLG 321
            + A + ++++I+ DPEN+  Y  +A   LQ   ++DEA++  + AI  +    + Y    
Sbjct: 1243 EEALKNYDQAIQKDPENSYYYNGKAD-TLQKMNSLDEALENYDLAIQKNPENSYYYNGKA 1301

Query: 322  TIEVQRGRLEEAVKCFNKAL 341
                +  R EEA++ ++ A+
Sbjct: 1302 DTLQKMNRFEEALENYDSAI 1321



 Score = 45.8 bits (107), Expect = 0.059,   Method: Compositional matrix adjust.
 Identities = 80/342 (23%), Positives = 139/342 (40%), Gaps = 54/342 (15%)

Query: 185  GQYEEALRNLDKTIALNPNFHVARAQRHFVVHKMIVPGDRERVEQSLKEFRNFVDTHSNV 244
             ++EE L N +  I  NP F        +   K I+         SL +F          
Sbjct: 1060 NKFEEDLENYESAIQRNPKF------TDYYFKKGII--------NSLDDF---------- 1095

Query: 245  VEACTLFAQVLVDQEDFDGAEEYFNRSIRVDPENASLYVHRAMLMLQARGNVDEAIKLIE 304
                   A  L     F+ A E ++  I+ + +N+  Y ++A + LQ    ++EA++  +
Sbjct: 1096 ------LADTLKKMNRFEEALENYDLVIQKNSQNSMYYFNKA-ITLQKMSRLEEALENYD 1148

Query: 305  KAISIDKSCMFAYETLGTIEVQRGRLEEAVKCFNKALPLARDEAELSHIYSLRDAAIAQM 364
            KAI  +      Y    T      R EEA++ ++ A+   +   E S  Y  +   +  M
Sbjct: 1149 KAIQQNPEDSRYYYNKATTLNNMNRFEEALENYDSAI---QKNPEDSRYYFNKAITLNTM 1205

Query: 365  ----KVCERYNIKKKVSPRSQNITKNEKLAIKQLR------ENNDIIIRPADKGGKTVVM 414
                K  E Y+   + +P       N+ + + ++       +N D  I+  D        
Sbjct: 1206 NRLEKALENYDSAIQKNPEDSRYYFNKAITLNKMNRYEEALKNYDQAIQK-DPENSYYYN 1264

Query: 415  DKADYTQKMTSILNS-NDYEI-IPGDPTKTIEESEKYGNLENESGQKHAASDFTKAFADL 472
             KAD  QKM S+  +  +Y++ I  +P     E+  Y N + ++ QK   + F +A  + 
Sbjct: 1265 GKADTLQKMNSLDEALENYDLAIQKNP-----ENSYYYNGKADTLQK--MNRFEEALENY 1317

Query: 473  DEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNP 514
            D A + +P  +D Y  +        ++EEAL N D  I  NP
Sbjct: 1318 DSAIQKNPENSDYYNGKADTLQKMNRFEEALENYDSAIQKNP 1359



 Score = 45.4 bits (106), Expect = 0.081,   Method: Compositional matrix adjust.
 Identities = 90/430 (20%), Positives = 172/430 (40%), Gaps = 60/430 (13%)

Query: 144 VVHLHAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPN 203
            + L   + F +A  + D A + +P     YY +        ++EEAL N D  I  NP 
Sbjct: 583 AITLDEMNRFEEALENYDSAIQKNPENQYFYYGKATTLSKMNRFEEALENYDSAIQKNP- 641

Query: 204 FHVARAQRHFVVHKMIVPGDRERVEQSLKEF-----RNFVDT----HSNVVEACTLFAQV 254
                 +  F   K I   +  R E++L+ +     +N  D+    +  +++     A  
Sbjct: 642 -----EKYDFYYGKAITLDEMNRFEEALQNYDQAIQKNPEDSRYQFNKGIIQNEQFQAIA 696

Query: 255 LVDQEDFDGAEEYFNRSIRVDPENASLYVHRA--------MLMLQARGNVDEAIKLIEKA 306
           L     F+ A E ++ +I+ +PE +  +  +          + L     ++EA++  + A
Sbjct: 697 LTQINRFEEALENYDLAIQKNPEISEYFNGKGKIQIRCFQAITLNIMDRLEEALENYDSA 756

Query: 307 ISIDKSCMFAYETLGTIEVQRGRLEEAVKCFNKALPLARDEAELSHIYSLRDAAIAQMK- 365
           I  +      Y        +  RLEEA++ ++ A+   +   E S  Y+ +   + ++  
Sbjct: 757 IQRNSDDSRYYFNKANTLNKMNRLEEALENYDSAI---KKNPENSDYYNGKAYTLQKLNR 813

Query: 366 ---VCERYNIKKKVSPRSQNITKNEKL---AIKQLRE-----NNDIIIRPADKGGKTVVM 414
                E Y+   + +P + +    +     A+ +L E     N+ I   P +    +   
Sbjct: 814 LETALENYDSAIQKNPENSDYYNRKAYTLYALNRLDEALENYNSSIQQNPEES---SYYF 870

Query: 415 DKADYTQKMTSILNSNDY--EIIPGDPTKTIEESEKYGNLENESGQKHAASDFTK---AF 469
           +KA    KM  ++ S +Y  E I  +P    E+SE Y      +G+        +   A 
Sbjct: 871 NKAITLHKMNRLVESLEYFDEAIKKNP----EDSEYY------NGKAFTLRKMNRVREAL 920

Query: 470 ADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQRHFVWTS 529
            + D A +  P  +  Y+ +        ++EEAL N D  I  NP    A ++ +    S
Sbjct: 921 QNFDSAIQKFPEDSRYYFNKAITLNTMNRFEEALENYDSAIQKNP----ADSRYYLNKAS 976

Query: 530 TLAELMAFSD 539
           TL ++  F +
Sbjct: 977 TLVKMNRFEE 986



 Score = 40.0 bits (92), Expect = 3.2,   Method: Compositional matrix adjust.
 Identities = 52/255 (20%), Positives = 104/255 (40%), Gaps = 10/255 (3%)

Query: 83  HCTEEIESTSSNHTKALARLLRATVYIFTSQST-KAIEDLTQLVE--DTSVDPKIKVNAH 139
           +  + +E    N+  A+ R    + Y F   +T   +  L + +E  D+++    + + +
Sbjct: 741 NIMDRLEEALENYDSAIQRNSDDSRYYFNKANTLNKMNRLEEALENYDSAIKKNPENSDY 800

Query: 140 IKRAVVHLHAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIA 199
                  L   +    A  + D A + +P  +D Y ++        + +EAL N + +I 
Sbjct: 801 YNGKAYTLQKLNRLETALENYDSAIQKNPENSDYYNRKAYTLYALNRLDEALENYNSSIQ 860

Query: 200 LNPNFHVARAQRHFVVHKMIVPGDRERVEQSLKEFRNFVDTHSNVVEACTLFAQVLVDQE 259
            NP        +   +HKM       R+ +SL+ F   +  +    E     A  L    
Sbjct: 861 QNPEESSYYFNKAITLHKM------NRLVESLEYFDEAIKKNPEDSEYYNGKAFTLRKMN 914

Query: 260 DFDGAEEYFNRSIRVDPENASLYVHRAMLMLQARGNVDEAIKLIEKAISIDKSCMFAYET 319
               A + F+ +I+  PE++  Y ++A + L      +EA++  + AI  + +    Y  
Sbjct: 915 RVREALQNFDSAIQKFPEDSRYYFNKA-ITLNTMNRFEEALENYDSAIQKNPADSRYYLN 973

Query: 320 LGTIEVQRGRLEEAV 334
             +  V+  R EEA+
Sbjct: 974 KASTLVKMNRFEEAL 988



 Score = 39.7 bits (91), Expect = 4.4,   Method: Compositional matrix adjust.
 Identities = 86/402 (21%), Positives = 158/402 (39%), Gaps = 81/402 (20%)

Query: 144 VVHLHAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNP- 202
            + L   + F +A    D+A   +P  +D Y  +        ++EEAL+N D+ I+ NP 
Sbjct: 478 AITLSKMNRFEEALEYYDQAISKNPEKSDIYKCKATTLSKMNRFEEALKNYDQAISKNPE 537

Query: 203 --NFHVARAQRHFVVHKMIVPGDRERVEQSLKEFRNFVDTHSNVVEACTLFAQVLVDQED 260
             + +  +  R   + KM       + E++L+ + + +  +    +     A  L +   
Sbjct: 538 KSDLYKCKDFRANTLSKM------NKFEEALEYYDSAIQKNPENSDIYYGKAITLDEMNR 591

Query: 261 FDGAEEYFNRSIRVDPENASLYVHRAMLMLQARGNVDEAIKLIEKAISID-KSCMFAYET 319
           F+ A E ++ +I+ +PEN   Y  +A   L      +EA++  + AI  + +   F Y  
Sbjct: 592 FEEALENYDSAIQKNPENQYFYYGKAT-TLSKMNRFEEALENYDSAIQKNPEKYDFYYGK 650

Query: 320 LGTIEVQRGRLEEAVKCFNKALPLARDEAE-----------------LSHIYSLRDA--- 359
             T++ +  R EEA++ +++A+    +++                  L+ I    +A   
Sbjct: 651 AITLD-EMNRFEEALQNYDQAIQKNPEDSRYQFNKGIIQNEQFQAIALTQINRFEEALEN 709

Query: 360 ---AIAQM-KVCERYNIKKKVSPRS-QNITKNEKLAIKQLRENNDIIIRPADKGGKTVVM 414
              AI +  ++ E +N K K+  R  Q IT N    +++  EN D  I+      +    
Sbjct: 710 YDLAIQKNPEISEYFNGKGKIQIRCFQAITLNIMDRLEEALENYDSAIQRNSDDSR-YYF 768

Query: 415 DKADYTQKMTSILNSNDYEIIPGDPTKTIEESEKYGNLENESGQKHAASDFTKAFADLDE 474
           +KA+   KM  +                                        +A  + D 
Sbjct: 769 NKANTLNKMNRL---------------------------------------EEALENYDS 789

Query: 475 AEKVDPNVADSYYQRGQIYCL--FGQYEEALRNLDKTIALNP 514
           A K +P  +D  Y  G+ Y L    + E AL N D  I  NP
Sbjct: 790 AIKKNPENSD--YYNGKAYTLQKLNRLETALENYDSAIQKNP 829



 Score = 38.5 bits (88), Expect = 8.3,   Method: Compositional matrix adjust.
 Identities = 46/228 (20%), Positives = 94/228 (41%), Gaps = 20/228 (8%)

Query: 88   IESTSSNHTKALARLLRATVYIFTSQST--------KAIEDLTQLVEDTSVDPKIKVNAH 139
            +E    N+ KA+ +    + Y +   +T        +A+E+    ++    D +   N  
Sbjct: 1140 LEEALENYDKAIQQNPEDSRYYYNKATTLNNMNRFEEALENYDSAIQKNPEDSRYYFNK- 1198

Query: 140  IKRAVVHLHAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIA 199
                 + L+  +   KA  + D A + +P  +  Y+ +        +YEEAL+N D+ I 
Sbjct: 1199 ----AITLNTMNRLEKALENYDSAIQKNPEDSRYYFNKAITLNKMNRYEEALKNYDQAIQ 1254

Query: 200  LNPNFHVARAQRHFVVHKMIVPGDRERVEQSLKEFRNFVDTHSNVVEACTLFAQVLVDQE 259
             +P        +   + KM        ++++L+ +   +  +          A  L    
Sbjct: 1255 KDPENSYYYNGKADTLQKM------NSLDEALENYDLAIQKNPENSYYYNGKADTLQKMN 1308

Query: 260  DFDGAEEYFNRSIRVDPENASLYVHRAMLMLQARGNVDEAIKLIEKAI 307
             F+ A E ++ +I+ +PEN+  Y  +A   LQ     +EA++  + AI
Sbjct: 1309 RFEEALENYDSAIQKNPENSDYYNGKAD-TLQKMNRFEEALENYDSAI 1355


>gi|145519597|ref|XP_001445665.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
 gi|124413120|emb|CAK78268.1| unnamed protein product [Paramecium tetraurelia]
          Length = 681

 Score = 64.7 bits (156), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 69/299 (23%), Positives = 133/299 (44%), Gaps = 37/299 (12%)

Query: 71  AFEHEDYLTAIRHCTEEIESTSSNHTKALARLLRATVYIFTSQSTKAIEDLTQLVEDTSV 130
           A + ED++ AI   T  +   +SNH K++    R   +        AI D T+ VE   +
Sbjct: 279 ARKKEDFIKAIEFYTMAL-MFNSNHFKSI--FNRGFAFDKLRMYNDAINDYTKAVE---M 332

Query: 131 DPKIKVNAHIKRAVVHLHAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEA 190
           DPK    A+  R + +     D+  A  D  +A ++DP+ AD Y+ +G       Q +EA
Sbjct: 333 DPK-NAYAYYNRGISY-DKKGDYNLAIKDFAKAIELDPSKADFYHNKGFAMKKKNQIKEA 390

Query: 191 LRNLDKTIALNPNFHVA---------------RAQRHFVV-------------HKMIVPG 222
           +   ++ + L+ N   A               +AQ+ +++             H  I+  
Sbjct: 391 ILEFNECLRLDKNHFKAYYNRANCYEKLGEFDKAQQDYLIANNVVPNNPNTLTHIGILMD 450

Query: 223 DRERVEQSLKEFRNFVDTHSNVVEACTLFAQVLVDQEDFDGAEEYFNRSIRVDPENASLY 282
            ++++E +LK F + +   SN   A      V     +++ A   FN++I ++P+N  +Y
Sbjct: 451 RQQKLEDALKYFNSSLKIDSNYAPAYNGRGLVYDKIGEYEKACIDFNKAIDIEPQNP-VY 509

Query: 283 VHRAMLMLQARGNVDEAIKLIEKAISIDKSCMFAYETLGTIEVQRGRLEEAVKCFNKAL 341
           +H      ++    ++A++  +KA+S+D      Y  +G +  +    E A  C+++ L
Sbjct: 510 IHNRGCCKRSMNKFEQALEDFKKALSLDSKNPIIYSNMGLVLRKMEDFETAAYCYSQEL 568



 Score = 51.6 bits (122), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 48/191 (25%), Positives = 90/191 (47%), Gaps = 7/191 (3%)

Query: 153 FTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQRH 212
           +  A  D  +A ++DP  A +YY RG  Y   G Y  A+++  K I L+P      ++  
Sbjct: 319 YNDAINDYTKAVEMDPKNAYAYYNRGISYDKKGDYNLAIKDFAKAIELDP------SKAD 372

Query: 213 FVVHKMIVPGDRERVEQSLKEFRNFVDTHSNVVEACTLFAQVLVDQEDFDGAEEYFNRSI 272
           F  +K      + ++++++ EF   +    N  +A    A       +FD A++ +  + 
Sbjct: 373 FYHNKGFAMKKKNQIKEAILEFNECLRLDKNHFKAYYNRANCYEKLGEFDKAQQDYLIAN 432

Query: 273 RVDPENASLYVHRAMLMLQARGNVDEAIKLIEKAISIDKSCMFAYETLGTIEVQRGRLEE 332
            V P N +   H  +LM + +  +++A+K    ++ ID +   AY   G +  + G  E+
Sbjct: 433 NVVPNNPNTLTHIGILMDRQQ-KLEDALKYFNSSLKIDSNYAPAYNGRGLVYDKIGEYEK 491

Query: 333 AVKCFNKALPL 343
           A   FNKA+ +
Sbjct: 492 ACIDFNKAIDI 502


>gi|386810943|ref|ZP_10098169.1| conserved hypothetical protein [planctomycete KSU-1]
 gi|386405667|dbj|GAB61050.1| conserved hypothetical protein [planctomycete KSU-1]
          Length = 560

 Score = 64.7 bits (156), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 65/256 (25%), Positives = 119/256 (46%), Gaps = 16/256 (6%)

Query: 267 YFNRSIRVDPENASLYVHRAMLMLQARGNVDEAIKLIEKAISIDKSCMFAYETLGTIEVQ 326
           Y+ +++ +D   A++Y++R+++  + +GN++ A+K + +AI + K+   AY   G I  +
Sbjct: 226 YYLKNLTMDEVIANIYLNRSIIQ-KEQGNIENALKDVNRAIELHKNDAVAYCNRGVIYEK 284

Query: 327 RGRLEEAVKCFNKALPLARDEAELSHIYSLRDAAIAQMKVCER----YNIKKKVSPRSQN 382
            G +E A+  +NK++ L  D A     Y  R +  A M+  E+    Y++   + P S  
Sbjct: 285 TGNVEHAIYDYNKSIDLNPDYAP---AYYNRGSLYASMEKLEKAIIDYSMAVSLDPNSIL 341

Query: 383 ITKNEKLAIKQLRENNDIIIRPADKGGKTVVMD---KADYTQKMTSILNSNDYEIIPGDP 439
              N  +A K +   +  I    +   K + +D      Y  +  +   S + E    D 
Sbjct: 342 SYYNRGIAFKMVGRVDLSI----EDLSKVISLDHTFAVAYAHRGLAYAESGESEKAMADF 397

Query: 440 TKTIEESEKYGNLENESGQKHA-ASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQ 498
            K +E    +     + G  HA    F  A  DL    +  PN A +YY R + Y   G+
Sbjct: 398 NKALEIDPNHAETYMKRGILHADLQHFDDAIKDLTTFIQCVPNNAFAYYIRAKAYRGKGE 457

Query: 499 YEEALRNLDKTIALNP 514
            E+++ + D+ I LNP
Sbjct: 458 IEKSMADYDRVIELNP 473



 Score = 60.5 bits (145), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 59/246 (23%), Positives = 109/246 (44%), Gaps = 12/246 (4%)

Query: 98  ALARLLRATVYIFTSQSTKAIEDLTQLVEDTSVDPKIKVNAHIKRAVVHLHAASDFTKAF 157
           A+A   R  +Y  T     AI D  + ++   ++P     A+  R  ++  +     KA 
Sbjct: 272 AVAYCNRGVIYEKTGNVEHAIYDYNKSID---LNPDY-APAYYNRGSLY-ASMEKLEKAI 326

Query: 158 ADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQRHFVVHK 217
            D   A  +DPN   SYY RG  + + G+ + ++ +L K I+L+  F VA A      H+
Sbjct: 327 IDYSMAVSLDPNSILSYYNRGIAFKMVGRVDLSIEDLSKVISLDHTFAVAYA------HR 380

Query: 218 MIVPGDRERVEQSLKEFRNFVDTHSNVVEACTLFAQVLVDQEDFDGAEEYFNRSIRVDPE 277
            +   +    E+++ +F   ++   N  E       +  D + FD A +     I+  P 
Sbjct: 381 GLAYAESGESEKAMADFNKALEIDPNHAETYMKRGILHADLQHFDDAIKDLTTFIQCVPN 440

Query: 278 NASLYVHRAMLMLQARGNVDEAIKLIEKAISIDKSCMFAYETLGTIEVQRGRLEEAVKCF 337
           NA  Y  RA    + +G +++++   ++ I ++      Y   G I+ Q  +  EA+  F
Sbjct: 441 NAFAYYIRAK-AYRGKGEIEKSMADYDRVIELNPRMAGVYYERGQIKNQLEKSREALMDF 499

Query: 338 NKALPL 343
           + +L L
Sbjct: 500 STSLEL 505



 Score = 56.6 bits (135), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 83/380 (21%), Positives = 148/380 (38%), Gaps = 77/380 (20%)

Query: 137 NAHIKRAVVHLHAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDK 196
           N ++ R+++      +   A  D++ A ++  N A +Y  RG IY   G  E A+ + +K
Sbjct: 239 NIYLNRSIIQ-KEQGNIENALKDVNRAIELHKNDAVAYCNRGVIYEKTGNVEHAIYDYNK 297

Query: 197 TIALNPNFHVARAQRHFVVHKMIVPGDRERVEQSLKEFRNFVDTHSNVVEACTLFAQVLV 256
           +I LNP++  A   R  +   M      E++E+++ ++   V    N + +         
Sbjct: 298 SIDLNPDYAPAYYNRGSLYASM------EKLEKAIIDYSMAVSLDPNSILS--------- 342

Query: 257 DQEDFDGAEEYFNRSIRVDPENASLYVHRAMLMLQARGNVDEAIKLIEKAISIDKSCMFA 316
                     Y+NR I                  +  G VD +I+ + K IS+D +   A
Sbjct: 343 ----------YYNRGI----------------AFKMVGRVDLSIEDLSKVISLDHTFAVA 376

Query: 317 YETLGTIEVQRGRLEEAVKCFNKALPLARDEAELSHIYSLRDAAIAQMKVCERYNIKKKV 376
           Y   G    + G  E+A+  FNKAL +  + AE    Y  R    A ++  +  +  K +
Sbjct: 377 YAHRGLAYAESGESEKAMADFNKALEIDPNHAE---TYMKRGILHADLQHFD--DAIKDL 431

Query: 377 SPRSQNITKNEKLAIKQLRENNDIIIRPADKGGKTVVMDKADYTQKMTSILNSNDYEIIP 436
           +   Q +  N      + +         A +G   +    ADY                 
Sbjct: 432 TTFIQCVPNNAFAYYIRAK---------AYRGKGEIEKSMADY----------------- 465

Query: 437 GDPTKTIEESEKYGNLENESGQ-KHAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCL 495
               + IE + +   +  E GQ K+      +A  D   + ++ P    +Y  RG  +  
Sbjct: 466 ---DRVIELNPRMAGVYYERGQIKNQLEKSREALMDFSTSLELFPYNPLAYLHRGNTFKK 522

Query: 496 FGQYEEALRNLDKTIALNPN 515
            G+ + ALR+    + LNPN
Sbjct: 523 LGEMKNALRDYSVYLKLNPN 542



 Score = 46.2 bits (108), Expect = 0.044,   Method: Compositional matrix adjust.
 Identities = 30/103 (29%), Positives = 49/103 (47%), Gaps = 1/103 (0%)

Query: 438 DPTKTIEESEKYGNLENESGQKHAASD-FTKAFADLDEAEKVDPNVADSYYQRGQIYCLF 496
           D  K+I+ +  Y       G  +A+ +   KA  D   A  +DPN   SYY RG  + + 
Sbjct: 294 DYNKSIDLNPDYAPAYYNRGSLYASMEKLEKAIIDYSMAVSLDPNSILSYYNRGIAFKMV 353

Query: 497 GQYEEALRNLDKTIALNPNFHVARAQRHFVWTSTLAELMAFSD 539
           G+ + ++ +L K I+L+  F VA A R   +  +     A +D
Sbjct: 354 GRVDLSIEDLSKVISLDHTFAVAYAHRGLAYAESGESEKAMAD 396


>gi|427724351|ref|YP_007071628.1| hypothetical protein Lepto7376_2520 [Leptolyngbya sp. PCC 7376]
 gi|427356071|gb|AFY38794.1| Tetratricopeptide TPR_1 repeat-containing protein [Leptolyngbya sp.
           PCC 7376]
          Length = 324

 Score = 64.7 bits (156), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 62/225 (27%), Positives = 100/225 (44%), Gaps = 33/225 (14%)

Query: 151 SDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQ 210
            ++  A  +L  A +  P+ AD+YYQRG ++   G   EA+ + ++ +  + N  VA  Q
Sbjct: 48  GNYGDALFELTTAIRFSPSFADAYYQRGFVHEKMGNTTEAIADYNRALQRDANHEVAYLQ 107

Query: 211 RHFVVHKMIVPGDRERVEQSLKEFRNFVDTHSNVVEACTLFAQVLVDQ------------ 258
           R  +  K           +++K   +F D    V+    +FA V   Q            
Sbjct: 108 RGMLYAK---------AGETVKAVEDF-DRILTVINPNNIFALVARGQAFASIGESVLAL 157

Query: 259 EDFDGAEEYFNRSIRVDPENASLYVHRAMLMLQARGNVDEAIKLIEKAISIDKSCMFAYE 318
           +DF GA       I ++   A  YV R  L+ Q   NV +A+     A+ ID S +  Y 
Sbjct: 158 QDFTGA-------INLNNRFAEAYVERG-LVYQRLNNVVQAVADYSMAVEIDPSLVTPYL 209

Query: 319 TLGTIEVQRGRLEEAVKCFNKALPLARDEAELSHIYSLRDAAIAQ 363
             G I  Q  R++EA+  +N AL   +++ E +  Y LR  A+ Q
Sbjct: 210 QRGAIYRQGNRIKEAIADYNFAL---QNDPENATAYYLRGVAVEQ 251



 Score = 44.3 bits (103), Expect = 0.17,   Method: Compositional matrix adjust.
 Identities = 60/289 (20%), Positives = 107/289 (37%), Gaps = 61/289 (21%)

Query: 69  KRAFEHEDYLTAIRHCTEEIESTSSNHTKALAR--------LLRATVYIFTSQSTKAIED 120
           +R F HE     + + TE I    +++ +AL R        L R  +Y    ++ KA+ED
Sbjct: 73  QRGFVHEK----MGNTTEAI----ADYNRALQRDANHEVAYLQRGMLYAKAGETVKAVED 124

Query: 121 LTQLVEDTSVDPKIKVNAHIKRAVVHLHAASDFTKAFADLDEAEKVDPNVADSYYQRGQI 180
             +++                                        ++PN   +   RGQ 
Sbjct: 125 FDRIL--------------------------------------TVINPNNIFALVARGQA 146

Query: 181 YCLFGQYEEALRNLDKTIALNPNFHVARAQRHFVVHKMIVPGDRERVEQSLKEFRNFVDT 240
           +   G+   AL++    I LN  F  A  +R  V  ++        V Q++ ++   V+ 
Sbjct: 147 FASIGESVLALQDFTGAINLNNRFAEAYVERGLVYQRL------NNVVQAVADYSMAVEI 200

Query: 241 HSNVVEACTLFAQVLVDQEDFDGAEEYFNRSIRVDPENASLYVHRAMLMLQARGNVDEAI 300
             ++V        +         A   +N +++ DPENA+ Y  R + + Q +G    A 
Sbjct: 201 DPSLVTPYLQRGAIYRQGNRIKEAIADYNFALQNDPENATAYYLRGVAVEQ-QGQYQAAF 259

Query: 301 KLIEKAISIDKSCMFAYETLGTIEVQRGRLEEAVKCFNKALPLARDEAE 349
               +AI  +     AY     I  QRG    A + + +A  L  D+ +
Sbjct: 260 TDYSRAIEFNDKIAPAYGNRANIYAQRGEYAAAKQDYQQAAQLFLDQGK 308



 Score = 38.9 bits (89), Expect = 7.0,   Method: Compositional matrix adjust.
 Identities = 21/77 (27%), Positives = 38/77 (49%)

Query: 463 SDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQ 522
            ++  A  +L  A +  P+ AD+YYQRG ++   G   EA+ + ++ +  + N  VA  Q
Sbjct: 48  GNYGDALFELTTAIRFSPSFADAYYQRGFVHEKMGNTTEAIADYNRALQRDANHEVAYLQ 107

Query: 523 RHFVWTSTLAELMAFSD 539
           R  ++      + A  D
Sbjct: 108 RGMLYAKAGETVKAVED 124


>gi|406983319|gb|EKE04534.1| TPR Domain containing protein [uncultured bacterium]
          Length = 257

 Score = 64.7 bits (156), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 48/183 (26%), Positives = 81/183 (44%), Gaps = 19/183 (10%)

Query: 163 AEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPN-----FHVARA-QRHFVVH 216
           A ++DPNV   Y     IY       +AL  L   I +NP+     +H AR   R F   
Sbjct: 61  ALEIDPNVQGIYQNLADIYLANEDIAQALIELQHAIIINPDNPGPRYHYARVLMRDF--- 117

Query: 217 KMIVPGDRERVEQSLKEFRNFVDTHSNVVEACTLFAQVLVDQEDFDGAEEYFNRSIRVDP 276
                    R + ++ E    ++   N  +A    A       ++DGA   + +   + P
Sbjct: 118 ---------RFDAAIDELEKVIEKAPNNTDAHYDLATAYFQMGNYDGAISEYEKVQEMVP 168

Query: 277 ENASLYVHRAMLMLQARGNVDEAIKLIEKAISIDKSCMFAYETLGTIEVQRGRLEEAVKC 336
           +NA +Y H A +  +A   +DEAIK   KAI ++++   +Y  LG +   +   ++A++ 
Sbjct: 169 DNADIYYHLA-VTYEANDQIDEAIKGFSKAIELNQAHFLSYRQLGILYTAKQEFDKAIES 227

Query: 337 FNK 339
           F K
Sbjct: 228 FEK 230



 Score = 41.6 bits (96), Expect = 1.0,   Method: Compositional matrix adjust.
 Identities = 47/195 (24%), Positives = 80/195 (41%), Gaps = 12/195 (6%)

Query: 167 DPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQRHFVVHKMIVPGDRER 226
           DP+    Y   G IY   G+ +EA+ +  K + ++PN       +    +   +    E 
Sbjct: 31  DPDNPYLYNNLGTIYYKLGKPDEAIESYKKALEIDPNV------QGIYQNLADIYLANED 84

Query: 227 VEQSLKEFRNFVDTHSNVVEACTLFAQVLVDQEDFDGAEEYFNRSIRVDPENASLYVHRA 286
           + Q+L E ++ +  + +       +A+VL+    FD A +   + I   P N   +   A
Sbjct: 85  IAQALIELQHAIIINPDNPGPRYHYARVLMRDFRFDAAIDELEKVIEKAPNNTDAHYDLA 144

Query: 287 MLMLQARGNVDEAIKLIEKAISIDKSCMFAYETLGTIEVQRGRLEEAVKCFNKALPLARD 346
               Q  GN D AI   EK   +       Y  L        +++EA+K F+KA+ L + 
Sbjct: 145 TAYFQ-MGNYDGAISEYEKVQEMVPDNADIYYHLAVTYEANDQIDEAIKGFSKAIELNQ- 202

Query: 347 EAELSHIYSLRDAAI 361
               +H  S R   I
Sbjct: 203 ----AHFLSYRQLGI 213


>gi|323452442|gb|EGB08316.1| putative O-linked GlcNAc transferase [Aureococcus anophagefferens]
          Length = 1151

 Score = 64.7 bits (156), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 55/221 (24%), Positives = 95/221 (42%), Gaps = 39/221 (17%)

Query: 162 EAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQRHFVVHKMIVP 221
           EA +  P+  D++   G +    G+ + A+    + I LNP F VA      +       
Sbjct: 255 EAIRRKPSAFDAHSNLGNVLKEQGKVDAAIAEYARAIELNPGFAVAHGN---LASCYFEK 311

Query: 222 GDRERVEQSLKEFRNFVDTHSNVVEACTLFAQVLVDQEDFDGAEEYFNRSIRVDPENASL 281
           GD ER   +++ FR  +D   N  +AC      L +  D + A   + R++ + P++A  
Sbjct: 312 GDLER---AIRIFRVALDIEPNFPDACNNLGNALREHGDLEEAIACYRRALLLRPDHAHA 368

Query: 282 Y--VHRAM-------------------------------LMLQARGNVDEAIKLIEKAIS 308
           +  +  AM                               L+L+ RG VD+A+    +AI+
Sbjct: 369 HNNLGNAMKDKGLVNEAIQCYATAVGLAPRFAAAHSNLGLVLKERGTVDDALAHYREAIA 428

Query: 309 IDKSCMFAYETLGTIEVQRGRLEEAVKCFNKALPLARDEAE 349
           +D     AY  +G      GRL++A++C+ +AL L  D A+
Sbjct: 429 VDPQFADAYSNMGNAYKDLGRLDDAIRCYGEALKLRPDFAD 469


>gi|227823431|ref|YP_002827404.1| O-linked GlcNAc transferase [Sinorhizobium fredii NGR234]
 gi|227342433|gb|ACP26651.1| O-linked GlcNAc transferase [Sinorhizobium fredii NGR234]
          Length = 295

 Score = 64.7 bits (156), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 63/234 (26%), Positives = 100/234 (42%), Gaps = 12/234 (5%)

Query: 157 FADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQRHFVVH 216
            A L      +P+  ++Y  RG  Y   G++  AL + D+ I LNP+F+ A A R  V  
Sbjct: 65  IASLSSVIASNPSDPEAYNVRGSAYGRAGEFRRALADFDQAIKLNPSFYQAYANRGLVHR 124

Query: 217 KMIVPGDRERVEQSLKEFRNFVDTHSNVVEACTLFAQVLVDQEDFDGAEEYFNRSIRVDP 276
            M   GD++    +L ++   +  +S+   A      +       D A   FN++I++D 
Sbjct: 125 NM---GDQQ---AALSDYNAALQLNSSYDVAYIGRGNLYRQANQLDNAFNDFNKAIQLDT 178

Query: 277 ENASLYVHRAMLMLQARGNVDEAIKLIEKAISIDKSCMFAYETLGTIEVQRGRLEEAVKC 336
            +   Y +R  L+ QAR +   AI+    AIS+  S    Y   G   V +G  + A   
Sbjct: 179 TDPRAYHNRG-LIYQARNDHAHAIEDFSTAISLSPSSAEPYNGRGISYVAQGDDDNAFSD 237

Query: 337 FNKAL----PLARDEAELSHIYSLR-DAAIAQMKVCERYNIKKKVSPRSQNITK 385
           FN A+     LA   A  + IY  R + A AQ        +  K  P    + +
Sbjct: 238 FNTAINLNGKLAESWANQALIYERRGEKAKAQKSYSHALQLDPKYEPARAGLAR 291



 Score = 55.5 bits (132), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 56/250 (22%), Positives = 111/250 (44%), Gaps = 18/250 (7%)

Query: 94  NHTKALARLLRATVYIFTSQSTKAIEDLTQLVEDTSVDPKIKVNAHIKRAVVHLHAASDF 153
           N ++++ R+ RA        S + I  L+ ++     DP+    A+  R   +  A  +F
Sbjct: 47  NASESMIRVERA------QGSEENIASLSSVIASNPSDPE----AYNVRGSAYGRAG-EF 95

Query: 154 TKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQRHF 213
            +A AD D+A K++P+   +Y  RG ++   G  + AL + +  + LN ++ VA   R  
Sbjct: 96  RRALADFDQAIKLNPSFYQAYANRGLVHRNMGDQQAALSDYNAALQLNSSYDVAYIGRGN 155

Query: 214 VVHKMIVPGDRERVEQSLKEFRNFVDTHSNVVEACTLFAQVLVDQEDFDGAEEYFNRSIR 273
           +  +        +++ +  +F   +   +    A      +   + D   A E F+ +I 
Sbjct: 156 LYRQA------NQLDNAFNDFNKAIQLDTTDPRAYHNRGLIYQARNDHAHAIEDFSTAIS 209

Query: 274 VDPENASLYVHRAMLMLQARGNVDEAIKLIEKAISIDKSCMFAYETLGTIEVQRGRLEEA 333
           + P +A  Y  R +  + A+G+ D A      AI+++     ++     I  +RG   +A
Sbjct: 210 LSPSSAEPYNGRGISYV-AQGDDDNAFSDFNTAINLNGKLAESWANQALIYERRGEKAKA 268

Query: 334 VKCFNKALPL 343
            K ++ AL L
Sbjct: 269 QKSYSHALQL 278



 Score = 43.5 bits (101), Expect = 0.29,   Method: Compositional matrix adjust.
 Identities = 31/117 (26%), Positives = 53/117 (45%), Gaps = 15/117 (12%)

Query: 423 MTSILNSNDYEIIPGDPTKTIEESEKYGNLENESGQKHAASDFTKAFADLDEAEKVDPNV 482
           ++S++ SN     P DP         YG           A +F +A AD D+A K++P+ 
Sbjct: 68  LSSVIASN-----PSDPEAYNVRGSAYGR----------AGEFRRALADFDQAIKLNPSF 112

Query: 483 ADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQRHFVWTSTLAELMAFSD 539
             +Y  RG ++   G  + AL + +  + LN ++ VA   R  ++        AF+D
Sbjct: 113 YQAYANRGLVHRNMGDQQAALSDYNAALQLNSSYDVAYIGRGNLYRQANQLDNAFND 169



 Score = 40.8 bits (94), Expect = 1.7,   Method: Compositional matrix adjust.
 Identities = 23/71 (32%), Positives = 35/71 (49%)

Query: 469 FADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQRHFVWT 528
            A L      +P+  ++Y  RG  Y   G++  AL + D+ I LNP+F+ A A R  V  
Sbjct: 65  IASLSSVIASNPSDPEAYNVRGSAYGRAGEFRRALADFDQAIKLNPSFYQAYANRGLVHR 124

Query: 529 STLAELMAFSD 539
           +   +  A SD
Sbjct: 125 NMGDQQAALSD 135


>gi|407779667|ref|ZP_11126921.1| hypothetical protein NA2_16832 [Nitratireductor pacificus pht-3B]
 gi|407298606|gb|EKF17744.1| hypothetical protein NA2_16832 [Nitratireductor pacificus pht-3B]
          Length = 272

 Score = 64.7 bits (156), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 53/181 (29%), Positives = 80/181 (44%), Gaps = 17/181 (9%)

Query: 168 PNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQRHFVVHKMIVPGDRERV 227
           PN  ++Y  RG  Y   G+Y EAL++ DK IALNP  H A A R  ++H+ +   DR   
Sbjct: 54  PNEPEAYNMRGAAYGRAGRYNEALKDFDKAIALNPRSHNAYANRA-LIHRYLGQNDRAMA 112

Query: 228 E--QSLKEFRNFVDTHSNVVEACTLFA---QVLVDQEDFDGAEEYFNRSIRVDPENASLY 282
           +  Q++    N+   +    E   L     + L D E          R+I +D  +   +
Sbjct: 113 DYNQAISLNPNYDTAYIGRAEIYRLAGRSTEALADLE----------RAIGLDTTDPRAF 162

Query: 283 VHRAMLMLQARGNVDEAIKLIEKAISIDKSCMFAYETLGTIEVQRGRLEEAVKCFNKALP 342
             R +L  QA G    AI+    +IS+     + Y   G   + +G  E A   FN A+ 
Sbjct: 163 YRRGLLY-QASGQHPYAIEDFAASISLAPDAPYGYNGRGLSYLAQGDDENAFSDFNTAIR 221

Query: 343 L 343
           L
Sbjct: 222 L 222



 Score = 54.3 bits (129), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 50/218 (22%), Positives = 102/218 (46%), Gaps = 12/218 (5%)

Query: 103 LRATVYIFTSQSTKAIEDLTQLVEDTSVDPKIKVNAHIKRAVVHLHAASDFTKAFADLDE 162
           +R   Y    +  +A++D  + +   +++P+   NA+  RA++H +   +  +A AD ++
Sbjct: 62  MRGAAYGRAGRYNEALKDFDKAI---ALNPRSH-NAYANRALIHRYLGQN-DRAMADYNQ 116

Query: 163 AEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQRHFVVHKMIVPG 222
           A  ++PN   +Y  R +IY L G+  EAL +L++ I L+         R F    ++   
Sbjct: 117 AISLNPNYDTAYIGRAEIYRLAGRSTEALADLERAIGLDTT-----DPRAFYRRGLLYQA 171

Query: 223 DRERVEQSLKEFRNFVDTHSNVVEACTLFAQVLVDQEDFDGAEEYFNRSIRVDPENASLY 282
             +    ++++F   +    +            + Q D + A   FN +IR+D + A  +
Sbjct: 172 SGQH-PYAIEDFAASISLAPDAPYGYNGRGLSYLAQGDDENAFSDFNTAIRLDDKIAESW 230

Query: 283 VHRAMLMLQARGNVDEAIKLIEKAISIDKSCMFAYETL 320
            ++A L+ + RG   +A K   +A+ +D     A + L
Sbjct: 231 ANQA-LVYEKRGENAKAFKSYTRALQLDPDYAPARDGL 267



 Score = 53.5 bits (127), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 62/265 (23%), Positives = 118/265 (44%), Gaps = 34/265 (12%)

Query: 92  SSNHTKALARLLRATVYIFTSQ-STKAIEDLTQLVEDTSVDPKIKVNAHIKRAVVHLHAA 150
           SSN    L+R       I T+Q S + I  L+ +++ T  +P+    A+  R   +  A 
Sbjct: 23  SSNPATDLSR-------IDTAQGSAENISSLSSVIDRTPNEPE----AYNMRGAAYGRAG 71

Query: 151 SDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNF---HVA 207
             + +A  D D+A  ++P   ++Y  R  I+   GQ + A+ + ++ I+LNPN+   ++ 
Sbjct: 72  R-YNEALKDFDKAIALNPRSHNAYANRALIHRYLGQNDRAMADYNQAISLNPNYDTAYIG 130

Query: 208 RAQRHFVVHKMIVPGDRERVEQSLKEFRNFVDTHSNVVEACTLFAQVLVDQEDFDGAEEY 267
           RA+    ++++       R  ++L +    +    +  +    + + L+ Q    G   Y
Sbjct: 131 RAE----IYRLA-----GRSTEALADLERAIGL--DTTDPRAFYRRGLLYQA--SGQHPY 177

Query: 268 ----FNRSIRVDPENASLYVHRAMLMLQARGNVDEAIKLIEKAISIDKSCMFAYETLGTI 323
               F  SI + P+    Y  R +  L A+G+ + A      AI +D     ++     +
Sbjct: 178 AIEDFAASISLAPDAPYGYNGRGLSYL-AQGDDENAFSDFNTAIRLDDKIAESWANQALV 236

Query: 324 EVQRGRLEEAVKCFNKALPLARDEA 348
             +RG   +A K + +AL L  D A
Sbjct: 237 YEKRGENAKAFKSYTRALQLDPDYA 261



 Score = 47.4 bits (111), Expect = 0.019,   Method: Compositional matrix adjust.
 Identities = 22/47 (46%), Positives = 28/47 (59%)

Query: 480 PNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQRHFV 526
           PN  ++Y  RG  Y   G+Y EAL++ DK IALNP  H A A R  +
Sbjct: 54  PNEPEAYNMRGAAYGRAGRYNEALKDFDKAIALNPRSHNAYANRALI 100



 Score = 42.7 bits (99), Expect = 0.48,   Method: Compositional matrix adjust.
 Identities = 55/224 (24%), Positives = 84/224 (37%), Gaps = 67/224 (29%)

Query: 316 AYETLGTIEVQRGRLEEAVKCFNKALPLARDEAELSHIYSLRDAAIAQMKVCERYNIKKK 375
           AY   G    + GR  EA+K F+KA+ L                                
Sbjct: 59  AYNMRGAAYGRAGRYNEALKDFDKAIAL-------------------------------- 86

Query: 376 VSPRSQNITKNEKLAIKQLRENNDIIIRPADKGGKTVVMDKADYTQKMTSILNSNDYEII 435
            +PRS N   N  L  + L +N+  +               ADY Q ++  LN N Y+  
Sbjct: 87  -NPRSHNAYANRALIHRYLGQNDRAM---------------ADYNQAIS--LNPN-YD-- 125

Query: 436 PGDPTKTIEESEKYGNLENESGQKHAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCL 495
               T  I  +E Y            A   T+A ADL+ A  +D     ++Y+RG +Y  
Sbjct: 126 ----TAYIGRAEIY----------RLAGRSTEALADLERAIGLDTTDPRAFYRRGLLYQA 171

Query: 496 FGQYEEALRNLDKTIALNPNFHVARAQRHFVWTSTLAELMAFSD 539
            GQ+  A+ +   +I+L P+       R   + +   +  AFSD
Sbjct: 172 SGQHPYAIEDFAASISLAPDAPYGYNGRGLSYLAQGDDENAFSD 215



 Score = 41.6 bits (96), Expect = 1.1,   Method: Compositional matrix adjust.
 Identities = 29/101 (28%), Positives = 49/101 (48%), Gaps = 11/101 (10%)

Query: 441 KTIEESEKYGNLENESGQKHA-ASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQY 499
           +T  E E Y    N  G  +  A  + +A  D D+A  ++P   ++Y  R  I+   GQ 
Sbjct: 52  RTPNEPEAY----NMRGAAYGRAGRYNEALKDFDKAIALNPRSHNAYANRALIHRYLGQN 107

Query: 500 EEALRNLDKTIALNPNFHVARAQRHFVW------TSTLAEL 534
           + A+ + ++ I+LNPN+  A   R  ++      T  LA+L
Sbjct: 108 DRAMADYNQAISLNPNYDTAYIGRAEIYRLAGRSTEALADL 148


>gi|325959264|ref|YP_004290730.1| hypothetical protein Metbo_1528 [Methanobacterium sp. AL-21]
 gi|325330696|gb|ADZ09758.1| Tetratricopeptide TPR_1 repeat-containing protein [Methanobacterium
           sp. AL-21]
          Length = 329

 Score = 64.7 bits (156), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 77/355 (21%), Positives = 148/355 (41%), Gaps = 60/355 (16%)

Query: 185 GQYEEALRNLDKTIALNPNFHVARAQRHFVVHKMIVPGDRERVEQSLKEFRNFVDTHSNV 244
           G Y+EAL   DK + ++     A      +  K+      E+  ++++ +   ++   N 
Sbjct: 23  GNYQEALEKNDKFLEIDSKNETAWIYNGLIYEKL------EQYPEAIESYDKALEI--NP 74

Query: 245 VEACTLFAQ--VLVDQEDFDGAEEYFNRSIRVDPENASLYVHRAMLMLQARGNVDEAIKL 302
             A T F +  +L + E F  A E +N SI+ D +    ++++ +L L   GN  EAI+ 
Sbjct: 75  KNALTWFYKGLILTNLEKFSEAIESYNTSIKYDSKIIGSWINKGVL-LNELGNYQEAIEC 133

Query: 303 IEKAISIDKSCMFAYETLGTIEVQRGRLEEAVKCFNKAL--------PLARDEAELSHIY 354
             K + +D     A+   G I  + G+  EA++CF   +         L +    L ++ 
Sbjct: 134 QNKVLELDPQNETAWINKGLILEELGKYSEAIECFENVIRINPKNLDSLFKKGVLLGNLK 193

Query: 355 SLRDAAIAQMKVCERYNIKKKVSPRSQNITKNEKLAIKQLRENNDIIIRPADKGGKTVVM 414
           + ++A     KV ER        P++ + + N K A + +    D  ++  DK  +    
Sbjct: 194 NYQEAINCYNKVLER-------DPKNAD-SWNNKGATQAMLGKKDEALKSYDKALEINPK 245

Query: 415 DKADYTQKMTSILNSNDYEIIPGDPTKTIEESEKYGNLENESGQKHAASDFTKAFADLDE 474
           +   +  K   + N   Y+       K+IE                            D 
Sbjct: 246 EADTWNNKALILSNQEKYQ-------KSIEL--------------------------YDI 272

Query: 475 AEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQRHFVWTS 529
           + ++DPN  D+++ +G      G++EEAL+  DK + L+P    A+  ++ + +S
Sbjct: 273 SIEIDPNFNDAWHNKGVALKALGKHEEALKCFDKVLELDPTDEKAKRLKNEILSS 327



 Score = 63.9 bits (154), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 69/320 (21%), Positives = 143/320 (44%), Gaps = 41/320 (12%)

Query: 54  GDTNESHELDLLSKAKRAFEHEDYLTAIRHCTEEIESTSSNHTKALARLLRATVYIFTSQ 113
           G  N S +  L  + K  F+  +Y  A+    + +E  S N T   A +    +Y    Q
Sbjct: 2   GLFNRSKKKLLFKEVKNFFKEGNYQEALEKNDKFLEIDSKNET---AWIYNGLIYEKLEQ 58

Query: 114 STKAIEDLTQLVEDTSVDPKIKVNAHIKRAVVHLHAASDFTKAFADLDEAEKVDPNVADS 173
             +AIE   + +E   ++PK  +    K  +  L     F++A    + + K D  +  S
Sbjct: 59  YPEAIESYDKALE---INPKNALTWFYKGLI--LTNLEKFSEAIESYNTSIKYDSKIIGS 113

Query: 174 YYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQRHFVVHKM--------------- 218
           +  +G +    G Y+EA+   +K + L+P    A   +  ++ ++               
Sbjct: 114 WINKGVLLNELGNYQEAIECQNKVLELDPQNETAWINKGLILEELGKYSEAIECFENVIR 173

Query: 219 IVPGDRERVEQ------SLKEFRNFVDTHSNVVEACTLFA---------QVLVDQEDFDG 263
           I P + + + +      +LK ++  ++ ++ V+E     A         Q ++ ++D   
Sbjct: 174 INPKNLDSLFKKGVLLGNLKNYQEAINCYNKVLERDPKNADSWNNKGATQAMLGKKD--E 231

Query: 264 AEEYFNRSIRVDPENASLYVHRAMLMLQARGNVDEAIKLIEKAISIDKSCMFAYETLGTI 323
           A + +++++ ++P+ A  + ++A L+L  +    ++I+L + +I ID +   A+   G  
Sbjct: 232 ALKSYDKALEINPKEADTWNNKA-LILSNQEKYQKSIELYDISIEIDPNFNDAWHNKGVA 290

Query: 324 EVQRGRLEEAVKCFNKALPL 343
               G+ EEA+KCF+K L L
Sbjct: 291 LKALGKHEEALKCFDKVLEL 310



 Score = 48.5 bits (114), Expect = 0.008,   Method: Compositional matrix adjust.
 Identities = 54/235 (22%), Positives = 103/235 (43%), Gaps = 49/235 (20%)

Query: 76  DYLTAIRHCTEEIESTSSNHTKALARLLRATVYIFTSQSTKAIEDLTQLVEDTSVDPKIK 135
           +Y  AI    + +E    N T   A + +  +     + ++AIE    ++    ++PK  
Sbjct: 126 NYQEAIECQNKVLELDPQNET---AWINKGLILEELGKYSEAIECFENVI---RINPK-N 178

Query: 136 VNAHIKRAVVHLHAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLD 195
           +++  K+ V+ L    ++ +A    ++  + DP  ADS+  +G    + G+ +EAL++ D
Sbjct: 179 LDSLFKKGVL-LGNLKNYQEAINCYNKVLERDPKNADSWNNKGATQAMLGKKDEALKSYD 237

Query: 196 KTIALNPNFHVARAQRHFVVHKMIVPGDRERVEQSLKEFRNFVDTHSNVVEACTLFAQVL 255
           K + +NP                             KE     DT +N        A +L
Sbjct: 238 KALEINP-----------------------------KE----ADTWNNK-------ALIL 257

Query: 256 VDQEDFDGAEEYFNRSIRVDPENASLYVHRAMLMLQARGNVDEAIKLIEKAISID 310
            +QE +  + E ++ SI +DP N +   H   + L+A G  +EA+K  +K + +D
Sbjct: 258 SNQEKYQKSIELYDISIEIDP-NFNDAWHNKGVALKALGKHEEALKCFDKVLELD 311


>gi|357029131|ref|ZP_09091139.1| hypothetical protein MEA186_30072 [Mesorhizobium amorphae
           CCNWGS0123]
 gi|355536213|gb|EHH05489.1| hypothetical protein MEA186_30072 [Mesorhizobium amorphae
           CCNWGS0123]
          Length = 284

 Score = 64.7 bits (156), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 55/204 (26%), Positives = 87/204 (42%), Gaps = 41/204 (20%)

Query: 146 HLHAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFH 205
           ++  A   T+  + L    + +P   ++Y  RG  Y   GQY+ AL++ D  I LNPNF+
Sbjct: 40  NIDKAQGSTENISSLSAVIQRNPQDPEAYNVRGSAYGRGGQYQAALKDFDTAIQLNPNFY 99

Query: 206 VARAQRHFVVHKMIVPGDRERVEQSLKEFRNFVDTHSNVVEACTLFAQVLVDQEDFDGAE 265
            A + R                                      L  + L +QE    A 
Sbjct: 100 QAYSNR-------------------------------------ALIQRFLGNQE---AAL 119

Query: 266 EYFNRSIRVDPENASLYVHRAMLMLQARGNVDEAIKLIEKAISIDKSCMFAYETLGTIEV 325
             +NRSI+++    + Y+ R  L  +A G   EA    +KAI +D +   AY   G I  
Sbjct: 120 ADYNRSIQINSNYDAAYIGRGNLYRKA-GRTTEAFNDFQKAIQLDTTDARAYHNRGLIYQ 178

Query: 326 QRGRLEEAVKCFNKALPLARDEAE 349
            +G+ + A++ F+ A+ LA D AE
Sbjct: 179 SQGQHKFAIEDFSTAISLAPDAAE 202



 Score = 47.0 bits (110), Expect = 0.026,   Method: Compositional matrix adjust.
 Identities = 54/241 (22%), Positives = 96/241 (39%), Gaps = 46/241 (19%)

Query: 114 STKAIEDLTQLVEDTSVDPKIKVNAHIKRAVVHLHAASDFTKAFADLDEAEKVDPNVADS 173
           ST+ I  L+ +++    DP+    A+  R   +      +  A  D D A +++PN   +
Sbjct: 47  STENISSLSAVIQRNPQDPE----AYNVRGSAYGRGGQ-YQAALKDFDTAIQLNPNFYQA 101

Query: 174 YYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQRHFVVHKMIVPGDRERVEQSLKE 233
           Y  R  I    G  E AL + +++I +N N+  A   R  +  K        R  ++  +
Sbjct: 102 YSNRALIQRFLGNQEAALADYNRSIQINSNYDAAYIGRGNLYRKA------GRTTEAFND 155

Query: 234 FRNFVDTHSNVVEACTLFAQVLVDQ-------EDF--------DGAEEY----------- 267
           F+  +   +    A      +   Q       EDF        D AE Y           
Sbjct: 156 FQKAIQLDTTDARAYHNRGLIYQSQGQHKFAIEDFSTAISLAPDAAEPYNGRGLSYLAMN 215

Query: 268 --------FNRSIRVDPENASLYVHRAMLMLQARGNVDEAIKLIEKAISIDKSCMFAYET 319
                   FN +I++D +NA  + ++A L+ + RG+   A K   +A+ +D +   A + 
Sbjct: 216 DEDNAFSDFNMAIKLDGKNAEAWANQA-LIYERRGDKVRASKSYREAVHLDPTYQPAKDG 274

Query: 320 L 320
           L
Sbjct: 275 L 275



 Score = 43.5 bits (101), Expect = 0.30,   Method: Compositional matrix adjust.
 Identities = 21/61 (34%), Positives = 33/61 (54%)

Query: 466 TKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQRHF 525
           T+  + L    + +P   ++Y  RG  Y   GQY+ AL++ D  I LNPNF+ A + R  
Sbjct: 48  TENISSLSAVIQRNPQDPEAYNVRGSAYGRGGQYQAALKDFDTAIQLNPNFYQAYSNRAL 107

Query: 526 V 526
           +
Sbjct: 108 I 108



 Score = 39.3 bits (90), Expect = 5.4,   Method: Compositional matrix adjust.
 Identities = 30/97 (30%), Positives = 48/97 (49%), Gaps = 6/97 (6%)

Query: 450 GNLENESGQKHAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKT 509
           GNL  ++G+       T+AF D  +A ++D   A +Y+ RG IY   GQ++ A+ +    
Sbjct: 140 GNLYRKAGRT------TEAFNDFQKAIQLDTTDARAYHNRGLIYQSQGQHKFAIEDFSTA 193

Query: 510 IALNPNFHVARAQRHFVWTSTLAELMAFSDEFMIPKI 546
           I+L P+       R   + +   E  AFSD  M  K+
Sbjct: 194 ISLAPDAAEPYNGRGLSYLAMNDEDNAFSDFNMAIKL 230


>gi|406981036|gb|EKE02561.1| hypothetical protein ACD_20C00362G0010 [uncultured bacterium]
          Length = 630

 Score = 64.7 bits (156), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 94/448 (20%), Positives = 185/448 (41%), Gaps = 36/448 (8%)

Query: 80  AIRHCTEEIESTSSNHTKALARLLRATVYIFTSQSTKAIEDLTQLVEDTSVDPKIKVNAH 139
           AI +  + IE  S +H   LA      +Y    Q  +A ++L   +     + KI    H
Sbjct: 161 AIENYRKAIEINSRSHKSYLAL---GILYYNQKQLDEANKELQNALSIDFNNTKI----H 213

Query: 140 IKRAVVHLHAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIA 199
               +++ +A  +F KA A+       +P   ++Y   G  Y   G  EEA++     IA
Sbjct: 214 FYLGLIY-NAQENFEKAIAEFKYVVTFEPKNIEAYNNLGLAYGFLGWLEEAIQEFKTAIA 272

Query: 200 LNPNFHVARAQRHFVVHKMIVPGDRERVEQSLKEFRNFVDTHSNVVEACTLFAQVLVDQE 259
           LNP+    R    ++         ++  + +  E +  +    +   +  +  QV    +
Sbjct: 273 LNPDNPEVRYALGYIYFM------KKNYQYAQIELQTAIRLKPDHELSYLILGQVYAHLD 326

Query: 260 DFDGAEEYFNRSIRVDPENASLYVHRAMLMLQARGNVDEAIKLIEKAISIDKSCMFAYET 319
            F  A + +N +++++P N + Y + A   L   G  ++A +  +K I ++ + + AY  
Sbjct: 327 RFKEAIDEYNEALKLNPNNPTTYYNLA-FALNTLGMSEKATECYKKVIELNPAYLSAYLD 385

Query: 320 LGTIEVQRGRLEEAVKCFNKALPLARDEAELSHIYSL---RDAAIAQMKVCERYNIKKKV 376
           LG I +  G+ + A +CF  A+  + +  E  +   L   R     +   C  + I   +
Sbjct: 386 LGNILLSNGQQDFAKECFEAAINRSSNFGEAYYSLGLCYIRSEEYQKALYCFDHAIA--I 443

Query: 377 SPRSQNITKNEKLAIKQLRENNDIIIRPADKGGKTVVMDKADYTQKMTSILNSNDYEIIP 436
           +P   +    + L  K+   N ++ I   ++  K    + A Y     +      Y+I+ 
Sbjct: 444 NPNLSDAYYQKGLIYKK-DGNMELAIENIEQAIKLDTENAASYNDLGLA------YQIL- 495

Query: 437 GDPTKTIEESEKYGNLE-NESGQKH-------AASDFTKAFADLDEAEKVDPNVADSYYQ 488
           G+  K I   +K   L+ + S  +H           + ++  +L  A ++ P  AD Y+ 
Sbjct: 496 GNQEKAISAFKKASFLDPDNSLYRHNLGIALFEGKRYKESIVELRRAIRLSPYNADIYFN 555

Query: 489 RGQIYCLFGQYEEALRNLDKTIALNPNF 516
              IY   G Y +A+ + +  +  NP +
Sbjct: 556 LANIYEKIGDYADAVDSYENFVKHNPEY 583



 Score = 60.1 bits (144), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 96/431 (22%), Positives = 187/431 (43%), Gaps = 31/431 (7%)

Query: 92  SSNHTKALARLLRATVYIFTSQSTKAIEDLTQLVEDTSVDPKIKVNAHIKRAVVHLHAAS 151
           ++N+  +L  L  + VY   +Q  +AIE L +  +     P+I +    +  + + H   
Sbjct: 70  NTNYINSLVGL--SKVYEVINQLPEAIEYLERAAQQVQNTPEILIQLG-QMYIENQH--- 123

Query: 152 DFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQR 211
            + K+   ++E  +  P + D YY     +   G   +A+ N  K I +N     +R+ +
Sbjct: 124 -YDKSINLINELLEKYPQLDDCYYLLALNHEKTGNIPQAIENYRKAIEIN-----SRSHK 177

Query: 212 HFVVHKMIVPGDRERVEQSLKEFRNFVDTHSNVVEACTLFAQVLVDQEDFDGAEEYFNRS 271
            ++    I+  ++++++++ KE +N +    N  +       +   QE+F+ A   F   
Sbjct: 178 SYLALG-ILYYNQKQLDEANKELQNALSIDFNNTKIHFYLGLIYNAQENFEKAIAEFKYV 236

Query: 272 IRVDPENASLYVHRAMLMLQARGNVDEAIKLIEKAISIDKSCMFAYETLGTIEVQRGRLE 331
           +  +P+N   Y +   L     G ++EAI+  + AI+++         LG I   +   +
Sbjct: 237 VTFEPKNIEAY-NNLGLAYGFLGWLEEAIQEFKTAIALNPDNPEVRYALGYIYFMKKNYQ 295

Query: 332 EAVKCFNKALPLARDEAELSHIYSLRDAAIAQM----KVCERYNIKKKVSPRSQNITKNE 387
            A      A+ L  D  ELS++  +     A +    +  + YN   K++P +     N 
Sbjct: 296 YAQIELQTAIRLKPDH-ELSYL--ILGQVYAHLDRFKEAIDEYNEALKLNPNNPTTYYNL 352

Query: 388 KLAIKQLRENNDIIIRPADKGGKTVVMDKADYTQK---MTSILNSNDYEIIPGDPTKT-I 443
             A+  L      +   A +  K V+     Y      + +IL SN  +    +  +  I
Sbjct: 353 AFALNTLG-----MSEKATECYKKVIELNPAYLSAYLDLGNILLSNGQQDFAKECFEAAI 407

Query: 444 EESEKYGNLENESGQKHAASD-FTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEA 502
             S  +G      G  +  S+ + KA    D A  ++PN++D+YYQ+G IY   G  E A
Sbjct: 408 NRSSNFGEAYYSLGLCYIRSEEYQKALYCFDHAIAINPNLSDAYYQKGLIYKKDGNMELA 467

Query: 503 LRNLDKTIALN 513
           + N+++ I L+
Sbjct: 468 IENIEQAIKLD 478


>gi|338810665|ref|ZP_08622906.1| peptidase C14 caspase catalytic subunit p20 [Acetonema longum DSM
           6540]
 gi|337277347|gb|EGO65743.1| peptidase C14 caspase catalytic subunit p20 [Acetonema longum DSM
           6540]
          Length = 329

 Score = 64.7 bits (156), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 46/202 (22%), Positives = 95/202 (47%), Gaps = 8/202 (3%)

Query: 142 RAVVHLHAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALN 201
           R +V++    D+ +A AD D+A  ++P  A +Y  RG  Y   G Y++A+ +  + +ALN
Sbjct: 81  RGIVYIKK-GDYDRAIADYDQAIALNPKFASAYNNRGVAYYAKGHYDQAIADHSQAVALN 139

Query: 202 PNFHVARAQRHFVVHKMIVPGDRERVEQSLKEFRNFVDTHSNVVEACTLFAQVLVDQEDF 261
           P    A   R          G  ++ ++++ ++   +  +   V A      +   +  +
Sbjct: 140 PKNAGAYYNRGNAY------GKNDQYDRAIADYTQAIALNPKHVAAYDNRGMLYKKKGQY 193

Query: 262 DGAEEYFNRSIRVDPENASLYVHRAMLMLQARGNVDEAIKLIEKAISIDKSCMFAYETLG 321
           D A +   ++I ++P+ A+ Y +R +   + +G  + AI   ++AI ++     AY   G
Sbjct: 194 DQAIDDHTQAIALEPKRATAYNNRGIAYTK-KGQYNRAIADFDQAILLNPKDAMAYYNRG 252

Query: 322 TIEVQRGRLEEAVKCFNKALPL 343
                +G    A+  +N+A+ L
Sbjct: 253 ITYADKGDYTRAIVTYNRAIAL 274



 Score = 60.8 bits (146), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 46/195 (23%), Positives = 88/195 (45%), Gaps = 7/195 (3%)

Query: 149 AASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVAR 208
           A  D+  A A   +   +   V ++Y  RG +Y   G Y+ A+ + D+ IALNP F  A 
Sbjct: 53  AQGDYDHAIAAYSQVIALQLQVPETYNSRGIVYIKKGDYDRAIADYDQAIALNPKFASAY 112

Query: 209 AQRHFVVHKMIVPGDRERVEQSLKEFRNFVDTHSNVVEACTLFAQVLVDQEDFDGAEEYF 268
             R    +       +   +Q++ +    V  +     A           + +D A   +
Sbjct: 113 NNRGVAYYA------KGHYDQAIADHSQAVALNPKNAGAYYNRGNAYGKNDQYDRAIADY 166

Query: 269 NRSIRVDPENASLYVHRAMLMLQARGNVDEAIKLIEKAISIDKSCMFAYETLGTIEVQRG 328
            ++I ++P++ + Y +R ML  + +G  D+AI    +AI+++     AY   G    ++G
Sbjct: 167 TQAIALNPKHVAAYDNRGML-YKKKGQYDQAIDDHTQAIALEPKRATAYNNRGIAYTKKG 225

Query: 329 RLEEAVKCFNKALPL 343
           +   A+  F++A+ L
Sbjct: 226 QYNRAIADFDQAILL 240



 Score = 53.9 bits (128), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 58/242 (23%), Positives = 100/242 (41%), Gaps = 42/242 (17%)

Query: 104 RATVYIFTSQSTKAIEDLTQLVEDTSVDPKIKVNAHIKRAVVHLHAASDFTKAFADLDEA 163
           R  VYI      +AI D  Q +   +++PK   +A+  R V + +A   + +A AD  +A
Sbjct: 81  RGIVYIKKGDYDRAIADYDQAI---ALNPKF-ASAYNNRGVAY-YAKGHYDQAIADHSQA 135

Query: 164 EKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQRHFVVHKM----- 218
             ++P  A +YY RG  Y    QY+ A+ +  + IALNP  HVA      +++K      
Sbjct: 136 VALNPKNAGAYYNRGNAYGKNDQYDRAIADYTQAIALNPK-HVAAYDNRGMLYKKKGQYD 194

Query: 219 ------------------------IVPGDRERVEQSLKEFRNFVDTHSNVVEACTLFAQV 254
                                   I    + +  +++ +F   +  +     A       
Sbjct: 195 QAIDDHTQAIALEPKRATAYNNRGIAYTKKGQYNRAIADFDQAILLNPKDAMAYYNRGIT 254

Query: 255 LVDQEDFDGAEEYFNRSIRVDPENASLYVHRAMLMLQARGNVDEAIKLIEKAISIDKSCM 314
             D+ D+  A   +NR+I +DP  A  Y  +A+         ++A +L E A S  K  +
Sbjct: 255 YADKGDYTRAIVTYNRAIALDPHYAEAYYQKAVA-------CEKAGRLPEAAESYHKFIL 307

Query: 315 FA 316
           +A
Sbjct: 308 YA 309



 Score = 52.8 bits (125), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 59/251 (23%), Positives = 102/251 (40%), Gaps = 37/251 (14%)

Query: 292 ARGNVDEAIKLIEKAISIDKSCMFAYETLGTIEVQRGRLEEAVKCFNKALPLARDEAELS 351
           A+G+ D AI    + I++       Y + G + +++G  + A+  +++A+ L     + +
Sbjct: 53  AQGDYDHAIAAYSQVIALQLQVPETYNSRGIVYIKKGDYDRAIADYDQAIAL---NPKFA 109

Query: 352 HIYSLRDAAIAQMKVCERYNIKKKVSPRSQNITKNEKLAIKQLRENNDIIIRPADKGGKT 411
             Y+ R  A        + +  + ++  SQ +  N K A       N          GK 
Sbjct: 110 SAYNNRGVA-----YYAKGHYDQAIADHSQAVALNPKNAGAYYNRGNAY--------GKN 156

Query: 412 VVMDKA--DYTQKMTSILN----------------SNDYEIIPGDPTKTIEESEKYGNLE 453
              D+A  DYTQ +   LN                   Y+    D T+ I    K     
Sbjct: 157 DQYDRAIADYTQAIA--LNPKHVAAYDNRGMLYKKKGQYDQAIDDHTQAIALEPKRATAY 214

Query: 454 NESGQKHAA-SDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIAL 512
           N  G  +     + +A AD D+A  ++P  A +YY RG  Y   G Y  A+   ++ IAL
Sbjct: 215 NNRGIAYTKKGQYNRAIADFDQAILLNPKDAMAYYNRGITYADKGDYTRAIVTYNRAIAL 274

Query: 513 NPNFHVARAQR 523
           +P++  A  Q+
Sbjct: 275 DPHYAEAYYQK 285


>gi|150403612|ref|YP_001330906.1| hypothetical protein MmarC7_1699 [Methanococcus maripaludis C7]
 gi|150034642|gb|ABR66755.1| TPR repeat-containing protein [Methanococcus maripaludis C7]
          Length = 409

 Score = 64.3 bits (155), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 43/174 (24%), Positives = 81/174 (46%), Gaps = 7/174 (4%)

Query: 173 SYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQRHFVVHKMIVPGDRERVEQSLK 232
           SY ++G+ Y L   YE ++   DK + L+P          ++    I  G+    E    
Sbjct: 26  SYAEKGEQYYLEKDYEHSIECFDKALELDPK---NTCSLEYLGKYYIKTGNYSNAELY-- 80

Query: 233 EFRNFVDTHSNVVEACTLFAQVLVDQEDFDGAEEYFNRSIRVDPENASLYVHRAMLMLQA 292
            F   ++       A     Q+ +  ED++ A  YFN S+ +D      + ++ +  L+ 
Sbjct: 81  -FTRLLEIEPENEIALKNLGQICILNEDYEKALYYFNTSLEIDNSVGKTWFYKGV-CLKM 138

Query: 293 RGNVDEAIKLIEKAISIDKSCMFAYETLGTIEVQRGRLEEAVKCFNKALPLARD 346
            GN DE+++  +K+    +  +  +  LG I  Q  + ++A++CF+KAL L R+
Sbjct: 139 LGNYDESVEAFDKSTGNYEEIVLIWNELGYIYYQNEKYDKAIECFDKALALDRN 192


>gi|334118012|ref|ZP_08492102.1| serine/threonine protein kinase with TPR repeats [Microcoleus
           vaginatus FGP-2]
 gi|333459997|gb|EGK88607.1| serine/threonine protein kinase with TPR repeats [Microcoleus
           vaginatus FGP-2]
          Length = 699

 Score = 64.3 bits (155), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 43/189 (22%), Positives = 93/189 (49%), Gaps = 7/189 (3%)

Query: 155 KAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQRHFV 214
           +A A  D A K+ P+ A ++  RG +     +YEEA+ + +K +    N + A   R   
Sbjct: 420 EAIASFDNALKIQPDYATAWEGRGDVLLDSQRYEEAIASYEKAVEFQSNLYRAWYNRGQA 479

Query: 215 VHKMIVPGDRERVEQSLKEFRNFVDTHSNVVEACTLFAQVLVDQEDFDGAEEYFNRSIRV 274
             K+      ++ +++++ ++  V+   +  EA      V ++      A E + +++R 
Sbjct: 480 YQKL------KQYDRAVESYQKAVEIKFDNYEAWYNLGNVFLEVNKNQEAFEAYEKAVRF 533

Query: 275 DPENASLYVHRAMLMLQARGNVDEAIKLIEKAISIDKSCMFAYETLGTIEVQRGRLEEAV 334
            P+    +  + + +L+ R + +EA++  EKA+ +      A+  LG    +  + E+A+
Sbjct: 534 QPKFYQSWYSKGIALLKMRRH-EEAVEAYEKAVKLKPDYYQAWYNLGWSYHELRKYEQAI 592

Query: 335 KCFNKALPL 343
           +C+N+AL L
Sbjct: 593 ECYNRALDL 601



 Score = 58.5 bits (140), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 73/380 (19%), Positives = 147/380 (38%), Gaps = 54/380 (14%)

Query: 147 LHAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHV 206
           L+  S F +A A  + A  + P+ A+ + ++ +      +Y E+    DK I L P +  
Sbjct: 344 LYNLSRFEEALAAYERAITLRPDYAEVWQEKAKTLYKLKKYHESQSAYDKAIELKPEYLE 403

Query: 207 ARAQRHFVVHKMIVPGDRERVEQSLKEFRNFVDTHSNVVEACTLFAQVLVDQEDFDGAEE 266
           A   R + + K+      ++ ++++  F N +    +   A      VL+D + ++ A  
Sbjct: 404 AWTGRGYALDKL------QQSQEAIASFDNALKIQPDYATAWEGRGDVLLDSQRYEEAIA 457

Query: 267 YFNRSIRVDPENASLYVHRAMLMLQARGNVDEAIKLIEKAISIDKSCMFAYETLGTIEVQ 326
            + +++         + +R     Q     D A++  +KA+ I      A+  LG + ++
Sbjct: 458 SYEKAVEFQSNLYRAWYNRGQ-AYQKLKQYDRAVESYQKAVEIKFDNYEAWYNLGNVFLE 516

Query: 327 RGRLEEAVKCFNKALPLARDEAELSHIYSLRDAAIAQMK----VCERYNIKKKVSPRSQN 382
             + +EA + + KA+   R + +    +  +  A+ +M+      E Y    K+ P    
Sbjct: 517 VNKNQEAFEAYEKAV---RFQPKFYQSWYSKGIALLKMRRHEEAVEAYEKAVKLKPDYYQ 573

Query: 383 ITKNEKLAIKQLRENNDII---IRPADKGGKTVVMDKADYTQKMTSILNSNDYEIIPGDP 439
              N   +  +LR+    I    R  D   K    D+A Y                    
Sbjct: 574 AWYNLGWSYHELRKYEQAIECYNRALDLNPKE---DQAWY-------------------- 610

Query: 440 TKTIEESEKYGNLENESGQKHAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQY 499
                         N    ++    +  A A  +EA  V  + ++++Y RG       +Y
Sbjct: 611 --------------NRGNAQYNLKRYEDAIASYNEAVYVKQDYSEAWYSRGNALVAIKRY 656

Query: 500 EEALRNLDKTIALNPNFHVA 519
           E+A+ + DK I   P++  A
Sbjct: 657 EDAIASYDKAIRYKPDYRAA 676


>gi|67923685|ref|ZP_00517153.1| TPR repeat:TPR repeat [Crocosphaera watsonii WH 8501]
 gi|67854485|gb|EAM49776.1| TPR repeat:TPR repeat [Crocosphaera watsonii WH 8501]
          Length = 530

 Score = 64.3 bits (155), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 48/193 (24%), Positives = 91/193 (47%), Gaps = 7/193 (3%)

Query: 155 KAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQRHFV 214
           +A A  D+A ++ P+   ++  RG      G+ +EA+ + DK + L P+ H A   R + 
Sbjct: 328 EAIASFDKALQLKPDDHQAWNNRGYALRQLGRSDEAIASYDKALQLKPDDHQAWNNRGYA 387

Query: 215 VHKMIVPGDRERVEQSLKEFRNFVDTHSNVVEACTLFAQVLVDQEDFDGAEEYFNRSIRV 274
           + ++       R ++++  +   +    +  EA       L     FD A   +++++++
Sbjct: 388 LRQL------GRFDEAIASYYKALQLKPDYYEAWHNRGIALRKLGRFDEAIASYDKALQL 441

Query: 275 DPENASLYVHRAMLMLQARGNVDEAIKLIEKAISIDKSCMFAYETLGTIEVQRGRLEEAV 334
            P+    + +R  + L+  G  DEAI   +KA+ +      A+   G      GRL+EA+
Sbjct: 442 KPDYHQAWHNRG-IALRKLGRFDEAIASYDKALQLKPDDHQAWYNRGIALGNLGRLDEAI 500

Query: 335 KCFNKALPLARDE 347
             F+KAL L  DE
Sbjct: 501 ASFDKALQLKPDE 513



 Score = 62.0 bits (149), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 49/229 (21%), Positives = 103/229 (44%), Gaps = 8/229 (3%)

Query: 124 LVEDTSVDPKIKVNAHIKRAVVHLHAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCL 183
           L +  ++DP  +     ++ ++H   A ++  A A  D+A ++ P+   ++  RG     
Sbjct: 230 LTDSPNLDPTKQSELWFEKGLIHTQQA-EYEAAIASYDKALQLTPDYDLAWNNRGIALAN 288

Query: 184 FGQYEEALRNLDKTIALNPNFHVARAQRHFVVHKMIVPGDRERVEQSLKEFRNFVDTHSN 243
            G++++A+ + DK + L P+   A   R   +       +R R ++++  F   +    +
Sbjct: 289 VGRFDKAIASYDKALQLTPDKDEAWCNRGIALF------NRGRSDEAIASFDKALQLKPD 342

Query: 244 VVEACTLFAQVLVDQEDFDGAEEYFNRSIRVDPENASLYVHRAMLMLQARGNVDEAIKLI 303
             +A       L      D A   +++++++ P++   + +R   + Q  G  DEAI   
Sbjct: 343 DHQAWNNRGYALRQLGRSDEAIASYDKALQLKPDDHQAWNNRGYALRQL-GRFDEAIASY 401

Query: 304 EKAISIDKSCMFAYETLGTIEVQRGRLEEAVKCFNKALPLARDEAELSH 352
            KA+ +      A+   G    + GR +EA+  ++KAL L  D  +  H
Sbjct: 402 YKALQLKPDYYEAWHNRGIALRKLGRFDEAIASYDKALQLKPDYHQAWH 450



 Score = 61.6 bits (148), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 47/203 (23%), Positives = 94/203 (46%), Gaps = 7/203 (3%)

Query: 145 VHLHAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNF 204
           + L     F KA A  D+A ++ P+  +++  RG      G+ +EA+ + DK + L P+ 
Sbjct: 284 IALANVGRFDKAIASYDKALQLTPDKDEAWCNRGIALFNRGRSDEAIASFDKALQLKPDD 343

Query: 205 HVARAQRHFVVHKMIVPGDRERVEQSLKEFRNFVDTHSNVVEACTLFAQVLVDQEDFDGA 264
           H A   R + + ++       R ++++  +   +    +  +A       L     FD A
Sbjct: 344 HQAWNNRGYALRQL------GRSDEAIASYDKALQLKPDDHQAWNNRGYALRQLGRFDEA 397

Query: 265 EEYFNRSIRVDPENASLYVHRAMLMLQARGNVDEAIKLIEKAISIDKSCMFAYETLGTIE 324
              + +++++ P+    + +R  + L+  G  DEAI   +KA+ +      A+   G   
Sbjct: 398 IASYYKALQLKPDYYEAWHNRG-IALRKLGRFDEAIASYDKALQLKPDYHQAWHNRGIAL 456

Query: 325 VQRGRLEEAVKCFNKALPLARDE 347
            + GR +EA+  ++KAL L  D+
Sbjct: 457 RKLGRFDEAIASYDKALQLKPDD 479



 Score = 56.6 bits (135), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 66/315 (20%), Positives = 132/315 (41%), Gaps = 46/315 (14%)

Query: 216 HKMIVPGDRERVEQSLKEFRNFVDTHSNV---VEACTLFAQVLV--DQEDFDGAEEYFNR 270
           +K   P +RE   + L E + ++    N+    ++   F + L+   Q +++ A   +++
Sbjct: 211 YKQFTPQERE---EKLAEIKAYLTDSPNLDPTKQSELWFEKGLIHTQQAEYEAAIASYDK 267

Query: 271 SIRVDPENASLYVHRAMLMLQARGNVDEAIKLIEKAISIDKSCMFAYETLGTIEVQRGRL 330
           ++++ P+    + +R + +    G  D+AI   +KA+ +      A+   G     RGR 
Sbjct: 268 ALQLTPDYDLAWNNRGIALANV-GRFDKAIASYDKALQLTPDKDEAWCNRGIALFNRGRS 326

Query: 331 EEAVKCFNKALPLARD--EAELSHIYSLRDAAIAQMKVCERYNIKKKVSPRSQNITKNEK 388
           +EA+  F+KAL L  D  +A  +  Y+LR    +   +   Y+   ++ P       N  
Sbjct: 327 DEAIASFDKALQLKPDDHQAWNNRGYALRQLGRSDEAIAS-YDKALQLKPDDHQAWNNRG 385

Query: 389 LAIKQLRENNDIIIRPADKGGKTVVMDKADYTQKMTSILNSNDYEIIPGDPTKTIEESEK 448
            A++QL   ++ I               A Y + +         ++ P          + 
Sbjct: 386 YALRQLGRFDEAI---------------ASYYKAL---------QLKP----------DY 411

Query: 449 YGNLENESGQKHAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDK 508
           Y    N          F +A A  D+A ++ P+   +++ RG      G+++EA+ + DK
Sbjct: 412 YEAWHNRGIALRKLGRFDEAIASYDKALQLKPDYHQAWHNRGIALRKLGRFDEAIASYDK 471

Query: 509 TIALNPNFHVARAQR 523
            + L P+ H A   R
Sbjct: 472 ALQLKPDDHQAWYNR 486



 Score = 38.9 bits (89), Expect = 6.6,   Method: Compositional matrix adjust.
 Identities = 23/90 (25%), Positives = 45/90 (50%), Gaps = 6/90 (6%)

Query: 145 VHLHAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNF 204
           + L     F +A A  D+A ++ P+   +++ RG      G+++EA+ + DK + L P+ 
Sbjct: 420 IALRKLGRFDEAIASYDKALQLKPDYHQAWHNRGIALRKLGRFDEAIASYDKALQLKPDD 479

Query: 205 HVARAQRHFVVHKMIVPGDRERVEQSLKEF 234
           H A   R       I  G+  R+++++  F
Sbjct: 480 HQAWYNRG------IALGNLGRLDEAIASF 503


>gi|431806833|ref|YP_007233731.1| hypothetical protein BPP43_00580 [Brachyspira pilosicoli P43/6/78]
 gi|430780192|gb|AGA65476.1| tetratricopeptide repeat-containing protein [Brachyspira pilosicoli
           P43/6/78]
          Length = 352

 Score = 64.3 bits (155), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 82/335 (24%), Positives = 141/335 (42%), Gaps = 58/335 (17%)

Query: 195 DKTIALNPNFH-VARAQRHFVVH-KMIVPGDRERVEQSLKEFRNFVDTHSNVV--EACTL 250
           D+  A N   + +   ++HF+V    IV  ++E     L    ++ D +S  +   A   
Sbjct: 54  DRAKAFNEELNKIMSDKKHFIVSFTNIVDNNKEVDIDRLNNLTDYHDYNSKGIYKSANGE 113

Query: 251 FAQVLVDQEDFDGAEEYFNRSIRVDPENASLYVHRAMLMLQARGNVDEAIKLIEKAISID 310
           +A+ +          +Y++ +I+++P  A  Y ++A+   +  G + EAI+  +KAI + 
Sbjct: 114 YAEAI----------KYYDEAIKLNPNMADAYYNKAIAKTKL-GLLKEAIEEYDKAIELR 162

Query: 311 KSCMFAYETLGTIEVQRGRLEEAVKCFNKALPLARDEAELSHIYS----LRDAAIAQMKV 366
               +AY   G ++   G LEEA+K F+KAL +   +  L   Y+    L D      + 
Sbjct: 163 ADYTYAYYNRGLLKSDLGLLEEAIKDFDKALSI---DPNLFDAYNNKGLLEDELGFSKEA 219

Query: 367 CERYNIKKKVSPRSQNITKNEKLAIKQLRENNDIIIRPADKGGKTVVMDKADYTQKMTSI 426
            + +N   K++P       N  LA                            Y  +  + 
Sbjct: 220 IKDFNKAIKLNP-------NYALA----------------------------YNNRGIAK 244

Query: 427 LNSNDYEIIPGDPTKTIEESEKYGNLENESGQ-KHAASDFTKAFADLDEAEKVDPNVADS 485
            N   YE    D  K I+ +  Y    N  G  K     + +A  D D+A K++P+  D+
Sbjct: 245 DNLGLYEEAIKDYNKAIKLNPNYAFAYNNRGNAKDNLGLYEEAIEDFDKAIKLNPDYVDA 304

Query: 486 YYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVAR 520
           Y  RG      G YEEAL++  K + L+P+   AR
Sbjct: 305 YNNRGFTKENLGLYEEALKDYKKALELDPSNECAR 339



 Score = 60.5 bits (145), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 49/191 (25%), Positives = 84/191 (43%), Gaps = 47/191 (24%)

Query: 156 AFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQRHFVV 215
           A  D D+A  +DPN+ D+Y  +G +    G  +EA+++ +K I LNPN+ +A   R    
Sbjct: 185 AIKDFDKALSIDPNLFDAYNNKGLLEDELGFSKEAIKDFNKAIKLNPNYALAYNNRGIAK 244

Query: 216 HKMIVPGDRERVEQSLKEFRNFVDTHSNVVEACTLFAQVLVDQEDFDGAEEYFNRSIRVD 275
             +                               L+ + + D          +N++I+++
Sbjct: 245 DNL------------------------------GLYEEAIKD----------YNKAIKLN 264

Query: 276 PENASLYVHRAMLMLQARGNV---DEAIKLIEKAISIDKSCMFAYETLGTIEVQRGRLEE 332
           P  A  Y +R      A+ N+   +EAI+  +KAI ++   + AY   G  +   G  EE
Sbjct: 265 PNYAFAYNNRG----NAKDNLGLYEEAIEDFDKAIKLNPDYVDAYNNRGFTKENLGLYEE 320

Query: 333 AVKCFNKALPL 343
           A+K + KAL L
Sbjct: 321 ALKDYKKALEL 331



 Score = 51.2 bits (121), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 59/237 (24%), Positives = 99/237 (41%), Gaps = 37/237 (15%)

Query: 292 ARGNVDEAIKLIEKAISIDKSCMFAYETLGTIEVQRGRLEEAVKCFNKALPLARDEAELS 351
           A G   EAIK  ++AI ++ +   AY      + + G L+EA++ ++KA+ L    A+ +
Sbjct: 110 ANGEYAEAIKYYDEAIKLNPNMADAYYNKAIAKTKLGLLKEAIEEYDKAIEL---RADYT 166

Query: 352 HIYSLRDAAIAQMKVCERYNIKKKVSPRSQNITKNEKLAIKQLRENNDIIIRPADK-GGK 410
           + Y  R    + + + E                     AIK   +   I     D    K
Sbjct: 167 YAYYNRGLLKSDLGLLEE--------------------AIKDFDKALSIDPNLFDAYNNK 206

Query: 411 TVVMDKADYTQKMTSILNSNDYEIIPGDPTKTIEESEKYGNLENESG-QKHAASDFTKAF 469
            ++ D+  ++++               D  K I+ +  Y    N  G  K     + +A 
Sbjct: 207 GLLEDELGFSKEAIK------------DFNKAIKLNPNYALAYNNRGIAKDNLGLYEEAI 254

Query: 470 ADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQRHFV 526
            D ++A K++PN A +Y  RG      G YEEA+ + DK I LNP++  A   R F 
Sbjct: 255 KDYNKAIKLNPNYAFAYNNRGNAKDNLGLYEEAIEDFDKAIKLNPDYVDAYNNRGFT 311



 Score = 49.3 bits (116), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 33/106 (31%), Positives = 54/106 (50%), Gaps = 10/106 (9%)

Query: 134 IKVNAHIKRAVVHLHAASD----FTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEE 189
           IK+N +   A  +   A D    + +A  D ++A K++PN A +Y  RG      G YEE
Sbjct: 227 IKLNPNYALAYNNRGIAKDNLGLYEEAIKDYNKAIKLNPNYAFAYNNRGNAKDNLGLYEE 286

Query: 190 ALRNLDKTIALNPNFHVARAQRHFVVHKMIVPGDRERVEQSLKEFR 235
           A+ + DK I LNP++  A   R F    + +       E++LK+++
Sbjct: 287 AIEDFDKAIKLNPDYVDAYNNRGFTKENLGL------YEEALKDYK 326



 Score = 40.0 bits (92), Expect = 3.3,   Method: Compositional matrix adjust.
 Identities = 22/68 (32%), Positives = 35/68 (51%)

Query: 459 KHAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHV 518
           K A  ++ +A    DEA K++PN+AD+YY +       G  +EA+   DK I L  ++  
Sbjct: 108 KSANGEYAEAIKYYDEAIKLNPNMADAYYNKAIAKTKLGLLKEAIEEYDKAIELRADYTY 167

Query: 519 ARAQRHFV 526
           A   R  +
Sbjct: 168 AYYNRGLL 175


>gi|156382129|ref|XP_001632407.1| predicted protein [Nematostella vectensis]
 gi|156219462|gb|EDO40344.1| predicted protein [Nematostella vectensis]
          Length = 923

 Score = 64.3 bits (155), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 88/390 (22%), Positives = 174/390 (44%), Gaps = 32/390 (8%)

Query: 152 DFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQR 211
           ++T A  D  E  + DP  + +Y  RG ++   GQ+ +AL +L   +  NP+  VA  QR
Sbjct: 151 NWTGAVNDFTEILEQDPQDSRAYTYRGTVFAKMGQFSKALPDLAAGVHYNPDNAVAFYQR 210

Query: 212 HFVVHKMIVPGDRERVEQSLKEFRNFVDTHSNVVEACTLFAQVLVDQEDFDGAEEYFNRS 271
             ++ K I P    R  Q         D+  NV+ A      +  D + ++ A   F  +
Sbjct: 211 GCILRK-IHP---RRALQDFSVSLLLDDSEENVM-AFMHRGILYTDLKRWEDAIPDFEAA 265

Query: 272 IRVDPENASLYVHRAMLMLQARGNVDEAIKLIEKAISIDKSCMFAYETLGTIEVQRGRLE 331
           IR+DP  AS YV+  ++ +    N  +AI+    AI +D + + A         + G L+
Sbjct: 266 IRLDPSLASAYVNIGLIYIIKHSNYQKAIRQYTSAIRVDPTYVRALICRAEAFQKMGMLQ 325

Query: 332 EAVKCFNKALPLARDEAELSHIYSLRDAAIAQMKVCERYNIK-KKVSPRSQNI--TKNEK 388
           EA+  + +A+ +  D   +S  +  R   + + K  +  +   K+ +  +Q +  +  ++
Sbjct: 326 EAILDYARAIHMRPD---VSDYHMARGKLLLEQKKLDLASFHVKQAAQLNQGLGASATQQ 382

Query: 389 LAIKQLRENNDIIIRPADKGGKT-------VVMDKADYTQK-----MTSILNSNDYEIIP 436
             +    +N D  I   ++  +        V++ K +   K     ++S L +   EI+ 
Sbjct: 383 AVVHSFLKNFDQAIDVLERATRVKPSAQIFVLLGKTNMKAKRFEDAISSFLKA--IEILT 440

Query: 437 GDPTKT---IEESEKYGNLENESGQKHAASDFTKAFADLDEAEKVDPNVADSYYQRGQIY 493
              ++    +E +  Y  +     + H  S    A+   +EA KV+P+ A+++YQRG + 
Sbjct: 441 PWNSRNPMPLEAAGVYFLIGMCQSEVHNDSGALDAY---NEAIKVNPDYAEAFYQRG-LT 496

Query: 494 CLFGQYEEALRNLDKTIALNPNFHVARAQR 523
            +   + + + + ++ +A+NP    A   R
Sbjct: 497 KMKLSHTKGVHDFNRALAINPKLFQAFLSR 526



 Score = 55.5 bits (132), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 105/453 (23%), Positives = 168/453 (37%), Gaps = 62/453 (13%)

Query: 64  LLSKAKRAFEHEDYLTAIRHCTEEIESTSSNHTKALARLLRATVYIFTSQSTKAIEDLTQ 123
            LS+A        Y   I  C E I+    +     A L R  +         A++DLT+
Sbjct: 523 FLSRAAYYGMKGRYSKGIMSCNEAIKLQPQS---VRAYLYRGALKYHIKAFGLAVKDLTE 579

Query: 124 LVEDTSVDPKIKVNAHIKRAVVHLHAASDFTKAFADLDEAEKVDPNVADSYYQ-RGQIYC 182
            V   ++D +  + A+  RAV H H    F KA  D      ++ N      Q RG +Y 
Sbjct: 580 AV---AIDCRCSL-AYFNRAVCH-HEMKYFQKALMDYGTVMLLETNPNLKVLQNRGLLYL 634

Query: 183 LFGQYEEALRNLD---KTIALNPNFHVARAQRHFVVHKMIVPGDRERVEQSLKEFRNFVD 239
             G  E AL +     K   LNP     R       HK+       ++E+++  + + + 
Sbjct: 635 EIGDIENALEDFKAAAKVSTLNPKI---RHTLGLCYHKL------NKLEEAVAAYDDALK 685

Query: 240 THSNVVEACTLFAQVLVD----QEDFDGAEEYFNRSIRVDPENASLYVHRAMLMLQARGN 295
                VEA       L+D    Q +  G  +Y  +++ +DP   S  V+ A   LQ  G 
Sbjct: 686 IDPFFVEAYNGRGNALMDFGHEQGNVLGRRDYL-KALHLDPLCLSARVNLAY-NLQVEGK 743

Query: 296 VDEAIKLIEKAISIDKSCMFAYETLGTIEVQRGRLEEAVKCFNKALPLARDEAELSHIYS 355
              A      AI+ID +C  A E    I +Q G    A    N+AL +++  AEL     
Sbjct: 744 FQAAWNQFSAAIAIDSTCQAALEGRAVINLQMGNTFGAFVDMNEALKISK-TAEL----- 797

Query: 356 LRDAAIAQMKVCERYNIKKKVSPRSQNITKNEKLAIKQLRENNDIIIRPADKGGKTVVMD 415
           L +  + Q  + +  N    V      I      A+      N +  R      +     
Sbjct: 798 LNNRGVVQQYMGDYVN---AVRDYQAAIRLEPSYALSYYNAGN-VYFR------QRQFKQ 847

Query: 416 KADYTQKMTSILNSNDYEIIPGDPTKTIEESEKYGNLENESGQKHAASDFTKAFADLDEA 475
              Y  K  S +  ++  ++    TK +                    D+  A  D   A
Sbjct: 848 ALSYFNKALSWIGDDESAVLNRAITKYM-------------------GDYVNAVRDYQAA 888

Query: 476 EKVDPNVADSYYQRGQIYCLFGQYEEALRNLDK 508
            +++P+ A SYY  G +Y    Q+++  R+  K
Sbjct: 889 IRLEPSYALSYYNAGNVYFRQRQFKQVRRSSSK 921



 Score = 42.0 bits (97), Expect = 0.88,   Method: Compositional matrix adjust.
 Identities = 59/294 (20%), Positives = 122/294 (41%), Gaps = 28/294 (9%)

Query: 99  LARLLRATVYIFTSQSTKAIEDLTQLVEDTSVDPKIKVNAHIKRAVVHLHAASDFTKAFA 158
           +A + R  +Y    +   AI D    +    +DP +  +A++   ++++   S++ KA  
Sbjct: 240 MAFMHRGILYTDLKRWEDAIPDFEAAIR---LDPSL-ASAYVNIGLIYIIKHSNYQKAIR 295

Query: 159 DLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNP---NFHVARAQRHFVV 215
               A +VDP    +   R + +   G  +EA+ +  + I + P   ++H+AR +     
Sbjct: 296 QYTSAIRVDPTYVRALICRAEAFQKMGMLQEAILDYARAIHMRPDVSDYHMARGKLLLEQ 355

Query: 216 HKMIVPGDRERVEQSLKEFRNFVDTHSNVVEACTLFAQVLVDQEDFDGAEEYFNRSIRVD 275
            K+ +     +    L +      T   VV +           ++FD A +   R+ RV 
Sbjct: 356 KKLDLASFHVKQAAQLNQGLGASATQQAVVHSFL---------KNFDQAIDVLERATRVK 406

Query: 276 PENASLYVHRAMLMLQARGNVDEAIKLIEKAISI-----DKSCM-----FAYETLGTIEV 325
           P +A ++V      ++A+   ++AI    KAI I      ++ M       Y  +G  + 
Sbjct: 407 P-SAQIFVLLGKTNMKAK-RFEDAISSFLKAIEILTPWNSRNPMPLEAAGVYFLIGMCQS 464

Query: 326 QRGRLEEAVKCFNKALPLARDEAELSHIYSLRDAAIAQMKVCERYNIKKKVSPR 379
           +      A+  +N+A+ +  D AE  +   L    ++  K    +N    ++P+
Sbjct: 465 EVHNDSGALDAYNEAIKVNPDYAEAFYQRGLTKMKLSHTKGVHDFNRALAINPK 518



 Score = 41.2 bits (95), Expect = 1.4,   Method: Compositional matrix adjust.
 Identities = 58/269 (21%), Positives = 112/269 (41%), Gaps = 38/269 (14%)

Query: 104 RATVYIFTSQSTKAIEDLTQLVEDTSVDPKIKVNAHIKRAVVHLHAASDFTKAFADLDEA 163
           R  +Y+  +    A++DLT +++ +S   +    A+  RA ++     D T A  +  +A
Sbjct: 40  RHLLYLLQNNKKAALDDLTFIIKHSSSQAR----AYRSRAELY-RQEGDATMAIVNYSQA 94

Query: 164 EKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPN-----FHVARAQRHFVVHKM 218
            K++PN  ++YYQR  ++ + G    AL +      L P+     F +   + +      
Sbjct: 95  IKLNPNDVETYYQRAAMFKMRGDMLLALEDYKIASRLLPSKTEAMFEIGMYRFNNENWTG 154

Query: 219 IVPGDRERVEQSLKEFRNFVDTHSNVVEACTLFAQVLVD-----QEDFDGAEEYFNRSI- 272
            V    E +EQ  ++ R +      V      F++ L D       + D A  ++ R   
Sbjct: 155 AVNDFTEILEQDPQDSRAYT-YRGTVFAKMGQFSKALPDLAAGVHYNPDNAVAFYQRGCI 213

Query: 273 --RVDP-----------------ENASLYVHRAMLMLQARGNVDEAIKLIEKAISIDKSC 313
             ++ P                 EN   ++HR +L    +   ++AI   E AI +D S 
Sbjct: 214 LRKIHPRRALQDFSVSLLLDDSEENVMAFMHRGILYTDLK-RWEDAIPDFEAAIRLDPSL 272

Query: 314 MFAYETLGTIE-VQRGRLEEAVKCFNKAL 341
             AY  +G I  ++    ++A++ +  A+
Sbjct: 273 ASAYVNIGLIYIIKHSNYQKAIRQYTSAI 301


>gi|428307941|ref|YP_007144766.1| hypothetical protein Cri9333_4474 [Crinalium epipsammum PCC 9333]
 gi|428249476|gb|AFZ15256.1| Tetratricopeptide TPR_1 repeat-containing protein [Crinalium
           epipsammum PCC 9333]
          Length = 564

 Score = 64.3 bits (155), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 49/220 (22%), Positives = 99/220 (45%), Gaps = 10/220 (4%)

Query: 150 ASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARA 209
           A DF  A A  D+A  + P+   +++ RG       ++E AL + D+ + +  +F+ A  
Sbjct: 185 AGDFEGALASYDQAVHIKPDYYKAWHNRGFALDNLERFEGALASYDQAVHIKSDFYNAWH 244

Query: 210 QRHFVVHKMIVPGDRERVEQSLKEFRNFVDTHSNVVEACTLFAQVLVDQEDFDGAEEYFN 269
            R  V+  +      ER E ++  F   V    +   A      VLV+ E F+ A   F+
Sbjct: 245 NRGVVLANL------ERFEDAIASFDQAVHIKPDFYNAWMELGAVLVNLERFEEALASFD 298

Query: 270 RSIRVDPENASLYVHRAMLMLQARGNVDEAIKLIEKAISIDKSCMFAYETLGTIEVQRGR 329
           +++ + P++   +++R   +       +EA+   ++ + I      A+ + G    +  R
Sbjct: 299 QAVDIKPDDHHAWLNRGSALFTLE-QFEEALASFDQVVDIKPDDYQAWYSRGMTLFRLER 357

Query: 330 LEEAVKCFNKALPLARDEAELSHIYSLRDAAIAQMKVCER 369
            EEA+  F++ + +  DE    H +  R  A+  ++  E+
Sbjct: 358 FEEALASFDQVVDIKPDE---HHAWYSRGIALDNLERFEK 394



 Score = 58.2 bits (139), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 41/195 (21%), Positives = 90/195 (46%), Gaps = 7/195 (3%)

Query: 153 FTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQRH 212
           F  A A  D+A  +  +  ++++ RG +     ++E+A+ + D+ + + P+F+ A  +  
Sbjct: 222 FEGALASYDQAVHIKSDFYNAWHNRGVVLANLERFEDAIASFDQAVHIKPDFYNAWMELG 281

Query: 213 FVVHKMIVPGDRERVEQSLKEFRNFVDTHSNVVEACTLFAQVLVDQEDFDGAEEYFNRSI 272
            V+  +      ER E++L  F   VD   +   A       L   E F+ A   F++ +
Sbjct: 282 AVLVNL------ERFEEALASFDQAVDIKPDDHHAWLNRGSALFTLEQFEEALASFDQVV 335

Query: 273 RVDPENASLYVHRAMLMLQARGNVDEAIKLIEKAISIDKSCMFAYETLGTIEVQRGRLEE 332
            + P++   +  R M + +     +EA+   ++ + I      A+ + G       R E+
Sbjct: 336 DIKPDDYQAWYSRGMTLFRLE-RFEEALASFDQVVDIKPDEHHAWYSRGIALDNLERFEK 394

Query: 333 AVKCFNKALPLARDE 347
           A++ F++A+ +  D+
Sbjct: 395 AIESFDQAVDIKPDD 409



 Score = 53.9 bits (128), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 34/135 (25%), Positives = 64/135 (47%), Gaps = 6/135 (4%)

Query: 153 FTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQRH 212
           F +A A  D+A  + P+   ++  RG       Q+EEAL + D+ + + P+ + A   R 
Sbjct: 290 FEEALASFDQAVDIKPDDHHAWLNRGSALFTLEQFEEALASFDQVVDIKPDDYQAWYSRG 349

Query: 213 FVVHKMIVPGDRERVEQSLKEFRNFVDTHSNVVEACTLFAQVLVDQEDFDGAEEYFNRSI 272
             + ++      ER E++L  F   VD   +   A       L + E F+ A E F++++
Sbjct: 350 MTLFRL------ERFEEALASFDQVVDIKPDEHHAWYSRGIALDNLERFEKAIESFDQAV 403

Query: 273 RVDPENASLYVHRAM 287
            + P++   +V R +
Sbjct: 404 DIKPDDYQAWVGRGI 418



 Score = 49.7 bits (117), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 41/173 (23%), Positives = 77/173 (44%), Gaps = 8/173 (4%)

Query: 137 NAHIKRAVVHLHAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDK 196
           NA   R VV L     F  A A  D+A  + P+  +++ + G +     ++EEAL + D+
Sbjct: 241 NAWHNRGVV-LANLERFEDAIASFDQAVHIKPDFYNAWMELGAVLVNLERFEEALASFDQ 299

Query: 197 TIALNPNFHVARAQRHFVVHKMIVPGDRERVEQSLKEFRNFVDTHSNVVEACTLFAQVLV 256
            + + P+ H A   R   +  +      E+ E++L  F   VD   +  +A       L 
Sbjct: 300 AVDIKPDDHHAWLNRGSALFTL------EQFEEALASFDQVVDIKPDDYQAWYSRGMTLF 353

Query: 257 DQEDFDGAEEYFNRSIRVDPENASLYVHRAMLMLQARGNVDEAIKLIEKAISI 309
             E F+ A   F++ + + P+    +  R  + L      ++AI+  ++A+ I
Sbjct: 354 RLERFEEALASFDQVVDIKPDEHHAWYSRG-IALDNLERFEKAIESFDQAVDI 405


>gi|134045937|ref|YP_001097423.1| hypothetical protein MmarC5_0901 [Methanococcus maripaludis C5]
 gi|132663562|gb|ABO35208.1| TPR repeat-containing protein [Methanococcus maripaludis C5]
          Length = 409

 Score = 64.3 bits (155), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 46/174 (26%), Positives = 83/174 (47%), Gaps = 7/174 (4%)

Query: 173 SYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQRHFVVHKMIVPGDRERVEQSLK 232
           SY + G+ Y L   YE ++   DK + L+P     R+  +   + M   GD  + E    
Sbjct: 26  SYAEMGEQYYLEKDYENSIECFDKALELDP--ENTRSLEYLGKYSM-KNGDYHKAENY-- 80

Query: 233 EFRNFVDTHSNVVEACTLFAQVLVDQEDFDGAEEYFNRSIRVDPENASLYVHRAMLMLQA 292
            F   ++       A     Q+ +  E+++ A  YFN+S+ +D      + ++  + L+ 
Sbjct: 81  -FDRLIEIDPENECALKNLGQIYMAYEEYEKALYYFNKSLEIDNSIGKTWFYKG-ICLKM 138

Query: 293 RGNVDEAIKLIEKAISIDKSCMFAYETLGTIEVQRGRLEEAVKCFNKALPLARD 346
            GN DE+I+  +K+    +  +  +  LG I  Q    E+A++CF+KAL L R+
Sbjct: 139 LGNYDESIESFDKSTGNYEEIVLIWNELGYIYYQNEEYEKALECFDKALLLNRN 192



 Score = 41.6 bits (96), Expect = 0.99,   Method: Compositional matrix adjust.
 Identities = 46/217 (21%), Positives = 93/217 (42%), Gaps = 11/217 (5%)

Query: 131 DPKIKVNAHIKRAVVHLHAAS----DFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQ 186
           D  ++++    R++ +L   S    D+ KA    D   ++DP    +    GQIY  + +
Sbjct: 48  DKALELDPENTRSLEYLGKYSMKNGDYHKAENYFDRLIEIDPENECALKNLGQIYMAYEE 107

Query: 187 YEEALRNLDKTIALNPNFHVARAQRHFVVHKMIVPGDRERVEQSLKEFRNFVDTHSNVVE 246
           YE+AL   +K++ ++ +       +   + KM+   D     +S++ F      +  +V 
Sbjct: 108 YEKALYYFNKSLEIDNSIGKTWFYKGICL-KMLGNYD-----ESIESFDKSTGNYEEIVL 161

Query: 247 ACTLFAQVLVDQEDFDGAEEYFNRSIRVDPENASLYVHRAMLMLQARGNVDEAIKLIEKA 306
                  +    E+++ A E F++++ ++  N     +   L  + +     AI+  +KA
Sbjct: 162 IWNELGYIYYQNEEYEKALECFDKALLLN-RNLKYSFNGKGLCYEKKEQYLLAIECFDKA 220

Query: 307 ISIDKSCMFAYETLGTIEVQRGRLEEAVKCFNKALPL 343
           +  D     A+   G    +      AV CF+KAL L
Sbjct: 221 LLQDSFYYGAWHNKGIEYYKLKNYSSAVLCFDKALEL 257



 Score = 38.9 bits (89), Expect = 7.2,   Method: Compositional matrix adjust.
 Identities = 20/85 (23%), Positives = 46/85 (54%), Gaps = 1/85 (1%)

Query: 259 EDFDGAEEYFNRSIRVDPENASLYVHRAMLMLQARGNVDEAIKLIEKAISIDKSCMFAYE 318
           +D++ + E + +++ + P +  L+ +   L    + N +E+I   EKA+ ++    +A+ 
Sbjct: 310 KDYNRSIEAYEKAVELTPNDDVLWSNIGYLQYNNK-NYNESISYFEKALELNSENKYAWN 368

Query: 319 TLGTIEVQRGRLEEAVKCFNKALPL 343
            LG   +     E+AV C+N+A+ +
Sbjct: 369 GLGNSYLLIKNYEKAVLCYNRAIEI 393


>gi|119357984|ref|YP_912628.1| hypothetical protein Cpha266_2203 [Chlorobium phaeobacteroides DSM
           266]
 gi|119355333|gb|ABL66204.1| TPR repeat-containing protein [Chlorobium phaeobacteroides DSM 266]
          Length = 331

 Score = 64.3 bits (155), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 63/294 (21%), Positives = 120/294 (40%), Gaps = 27/294 (9%)

Query: 63  DLLSKAKRAFEHEDYLTAIRHCTEEIESTSSNHTKALARLLRATVYIFTSQSTKAIEDLT 122
           D ++   +  +  DYL AI   T+ I   + N          A  Y     + K++ D +
Sbjct: 17  DNVNSGNQKIDANDYLGAIADLTKAIAIDAKN----------AQAYHDRGYAKKSMRDYS 66

Query: 123 QLVEDTSVDPKIKVN---AHIKRAVVHLHAASDFTKAFADLDEAEKVDPNVADSYYQRGQ 179
             ++D +    +  N   A+I R  V   A  D++ A  D  +A +++P  A +Y  RG 
Sbjct: 67  GAIDDYTKAISLNSNFSAAYINRGYVK-DATGDYSGAIEDYTKALQINPKEALAYVNRGL 125

Query: 180 IYCLFGQYEEALRNLDKTIALNPNFHVARAQRHFVVHKMIVPGDRERVEQSLKEFRNFVD 239
                G    A+ +  K I ++P    A   R     K+         + +  +F   ++
Sbjct: 126 SKDSIGDLPGAIADYTKAIEIDPKNAPAYVNRGITTAKI------GTFQNASADFTKAIE 179

Query: 240 THSNVVEACTLFAQVLVDQEDFDGAEEYFNRSIRVDPENASLYVHRA----MLMLQARGN 295
              N+++A     +  +  +D  GA   F ++I +DP+N   Y +R     +++L+ +  
Sbjct: 180 LQPNMIQAFNNRGRAKMLMKDLSGAIADFTKAIEIDPKNPIGYFNRGSANSVIILRDK-- 237

Query: 296 VDEAIKLIEKAISIDKSCMFAYETLGTIEVQRGRLEEAVKCFNKALPLARDEAE 349
             +AI    KAI +D +   AY   G   +  G +   +      + L  ++A 
Sbjct: 238 -TDAITDFSKAIELDPNFAAAYTGRGNARIMSGDINGGIADMTTVIKLNPNDAS 290



 Score = 62.8 bits (151), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 72/282 (25%), Positives = 127/282 (45%), Gaps = 27/282 (9%)

Query: 76  DYLTAIRHCTEEIESTSSNHTKALARLLRATVYIFTSQSTKAIEDLTQLVEDTSVDPKIK 135
           DY  AI   T+ I S +SN + A   + R  V   T   + AIED T+ ++   ++PK  
Sbjct: 64  DYSGAIDDYTKAI-SLNSNFSAAY--INRGYVKDATGDYSGAIEDYTKALQ---INPKEA 117

Query: 136 VNAHIKRAVVHLHAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLD 195
           + A++ R +    +  D   A AD  +A ++DP  A +Y  RG      G ++ A  +  
Sbjct: 118 L-AYVNRGLSK-DSIGDLPGAIADYTKAIEIDPKNAPAYVNRGITTAKIGTFQNASADFT 175

Query: 196 KTIALNPNFHVARAQRHFVVHKMIVPGDRERVEQSLKEFRNFVD-------THSNVVEAC 248
           K I L PN   A   R     KM++    + +  ++ +F   ++        + N   A 
Sbjct: 176 KAIELQPNMIQAFNNRGRA--KMLM----KDLSGAIADFTKAIEIDPKNPIGYFNRGSAN 229

Query: 249 TLFAQVLVDQEDFDGAEEYFNRSIRVDPENASLYVHRAMLMLQARGNVDEAIKLIEKAIS 308
           ++   +L D+ D   A   F+++I +DP  A+ Y  R    + + G+++  I  +   I 
Sbjct: 230 SVI--ILRDKTD---AITDFSKAIELDPNFAAAYTGRGNARIMS-GDINGGIADMTTVIK 283

Query: 309 IDKSCMFAYETLGTIEVQRGRLEEAVKCFNKALPLARDEAEL 350
           ++ +   AY   G  ++       A+  FNKA+ L    AE+
Sbjct: 284 LNPNDASAYYNRGAFKILNNDKNSALADFNKAIELDPKNAEM 325



 Score = 62.8 bits (151), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 68/300 (22%), Positives = 123/300 (41%), Gaps = 41/300 (13%)

Query: 223 DRERVEQSLKEFRNFVDTHSNVVEACTLFAQVLVDQE-------DFDGAEEYFNRSIRVD 275
           DR   ++S++++   +D ++  +   + F+   +++        D+ GA E + ++++++
Sbjct: 54  DRGYAKKSMRDYSGAIDDYTKAISLNSNFSAAYINRGYVKDATGDYSGAIEDYTKALQIN 113

Query: 276 PENASLYVHRAMLMLQARGNVDEAIKLIEKAISIDKSCMFAYETLGTIEVQRGRLEEAVK 335
           P+ A  YV+R  L   + G++  AI    KAI ID     AY   G    + G  + A  
Sbjct: 114 PKEALAYVNRG-LSKDSIGDLPGAIADYTKAIEIDPKNAPAYVNRGITTAKIGTFQNASA 172

Query: 336 CFNKALPLARDEAELSHIYSLRDAAIAQMKVCERYNIKKKVSPRSQNITKNEKLAIKQLR 395
            F KA+ L   +  +   ++ R  A   MK     ++   ++  ++ I  + K  I    
Sbjct: 173 DFTKAIEL---QPNMIQAFNNRGRAKMLMK-----DLSGAIADFTKAIEIDPKNPIGYF- 223

Query: 396 ENNDIIIRPADKGGKTVVMDKADYTQKMTSILNSNDYEIIPGDPTKTIEESEKYGNLENE 455
                     ++G    V+   D T  +T             D +K IE    +      
Sbjct: 224 ----------NRGSANSVIILRDKTDAIT-------------DFSKAIELDPNFAAAYTG 260

Query: 456 SGQKHAAS-DFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNP 514
            G     S D     AD+    K++PN A +YY RG    L      AL + +K I L+P
Sbjct: 261 RGNARIMSGDINGGIADMTTVIKLNPNDASAYYNRGAFKILNNDKNSALADFNKAIELDP 320



 Score = 51.6 bits (122), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 58/242 (23%), Positives = 95/242 (39%), Gaps = 48/242 (19%)

Query: 76  DYLTAIRHCTEEIESTSSNHTKALARLLRATVYIFTSQSTKAIEDLTQLVEDTSVDPKIK 135
           DY  AI   T+ ++    N  +ALA + R            AI D T+ +E   +DPK  
Sbjct: 98  DYSGAIEDYTKALQI---NPKEALAYVNRGLSKDSIGDLPGAIADYTKAIE---IDPK-N 150

Query: 136 VNAHIKRAVVHL------HAASDFTKAF---------------------------ADLDE 162
             A++ R +         +A++DFTKA                            AD  +
Sbjct: 151 APAYVNRGITTAKIGTFQNASADFTKAIELQPNMIQAFNNRGRAKMLMKDLSGAIADFTK 210

Query: 163 AEKVDPNVADSYYQRGQI--YCLFGQYEEALRNLDKTIALNPNFHVARAQRHFVVHKMIV 220
           A ++DP     Y+ RG      +     +A+ +  K I L+PNF  A   R    +  I+
Sbjct: 211 AIEIDPKNPIGYFNRGSANSVIILRDKTDAITDFSKAIELDPNFAAAYTGRG---NARIM 267

Query: 221 PGDRERVEQSLKEFRNFVDTHSNVVEACTLFAQVLVDQEDFDGAEEYFNRSIRVDPENAS 280
            GD   +   + +    +  + N   A        +   D + A   FN++I +DP+NA 
Sbjct: 268 SGD---INGGIADMTTVIKLNPNDASAYYNRGAFKILNNDKNSALADFNKAIELDPKNAE 324

Query: 281 LY 282
           +Y
Sbjct: 325 MY 326



 Score = 45.8 bits (107), Expect = 0.065,   Method: Compositional matrix adjust.
 Identities = 27/77 (35%), Positives = 38/77 (49%)

Query: 454 NESGQKHAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALN 513
           N   QK  A+D+  A ADL +A  +D   A +Y+ RG        Y  A+ +  K I+LN
Sbjct: 20  NSGNQKIDANDYLGAIADLTKAIAIDAKNAQAYHDRGYAKKSMRDYSGAIDDYTKAISLN 79

Query: 514 PNFHVARAQRHFVWTST 530
            NF  A   R +V  +T
Sbjct: 80  SNFSAAYINRGYVKDAT 96



 Score = 45.4 bits (106), Expect = 0.068,   Method: Compositional matrix adjust.
 Identities = 48/190 (25%), Positives = 76/190 (40%), Gaps = 20/190 (10%)

Query: 27  IKTYLKSFPNDPILQPDGLSNGVE------LTNGDTNESHELDLLSKAKRAFEH------ 74
           I  Y K+   DP   P  ++ G+         N   + +  ++L     +AF +      
Sbjct: 137 IADYTKAIEIDPKNAPAYVNRGITTAKIGTFQNASADFTKAIELQPNMIQAFNNRGRAKM 196

Query: 75  --EDYLTAIRHCTEEIESTSSNHTKALARLLRATVYIFTSQSTKAIEDLTQLVEDTSVDP 132
             +D   AI   T+ IE    N      R    +V I   + T AI D ++ +E   +DP
Sbjct: 197 LMKDLSGAIADFTKAIEIDPKNPIGYFNRGSANSVIILRDK-TDAITDFSKAIE---LDP 252

Query: 133 KIKVNAHIKRAVVHLHAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALR 192
                A+  R    + +  D     AD+    K++PN A +YY RG    L      AL 
Sbjct: 253 NFAA-AYTGRGNARIMSG-DINGGIADMTTVIKLNPNDASAYYNRGAFKILNNDKNSALA 310

Query: 193 NLDKTIALNP 202
           + +K I L+P
Sbjct: 311 DFNKAIELDP 320


>gi|17231265|ref|NP_487813.1| serine/threonine kinase [Nostoc sp. PCC 7120]
 gi|17132907|dbj|BAB75472.1| serine/threonine kinase [Nostoc sp. PCC 7120]
          Length = 707

 Score = 64.3 bits (155), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 74/372 (19%), Positives = 151/372 (40%), Gaps = 50/372 (13%)

Query: 153 FTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQRH 212
           +  A +  ++A  + P+ A ++  +G+      QY++AL   DK I + P++  A + R 
Sbjct: 345 YKDALSAYEQAVDIRPDYAPAWQGKGKTLFRLKQYQDALTAYDKAIQIQPDYVEAWSGRG 404

Query: 213 FVVHKMIVPGDRERVEQSLKEFRNFVDTHSNVVEACTLFAQVLVDQEDFDGAEEYFNRSI 272
           F +  +      +R  +++  F   +  + N  E      +   + + +D A + ++++I
Sbjct: 405 FSLQNL------QRYSEAIASFDKALQLNENYPEVWNARGEAFSNLKQYDQAIKSYDKAI 458

Query: 273 RVDPENASLYVHRAMLMLQARGNVDEAIKLIEKAISIDKSCMFAYETLGTIEVQRGRLEE 332
             + +    + ++  L LQ+    +EAI    KAI I      A+  LG   V   R E+
Sbjct: 459 EFNSDAYESFYNKG-LALQSMKEYNEAINAYNKAIEIKSDYERAWYNLGNSLVNLNRYED 517

Query: 333 AVKCFNKALPLARDEAELSHIYSLRDAAIAQM-----KVCERYNIKKKVSPRSQNITKNE 387
           A K ++KA+    D A    I  L    +  +     +  E +N   K +P +       
Sbjct: 518 AFKAYDKAVQYKTDYA----IAWLSRGNVLIILRRYPEALESFNQVIKFNPNNYQAWYGR 573

Query: 388 KLAIKQLRENNDIIIRPADKGGKTVVMDKADYTQKMTSILNSNDYEIIPGDPTKTIEESE 447
             +  Q +   + I                  + K  + +  ++YEI             
Sbjct: 574 GWSQHQNQRYAEAI-----------------ESYKKAATIKPSNYEI------------- 603

Query: 448 KYGNLENESGQKHAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLD 507
            + +L N    ++    + +A A  ++A +  P   +S+Y RG       QY+EA+ + +
Sbjct: 604 -WYSLGNS---QYILQQYQEAIASYNKAVRYRPKHIESWYSRGNALFSLKQYKEAIASYE 659

Query: 508 KTIALNPNFHVA 519
           + I   P++  A
Sbjct: 660 QAIKHKPDYSQA 671



 Score = 52.4 bits (124), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 55/282 (19%), Positives = 123/282 (43%), Gaps = 29/282 (10%)

Query: 153 FTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQRH 212
           +++A A  D+A +++ N  + +  RG+ +    QY++A+++ DK I  N + + +   + 
Sbjct: 413 YSEAIASFDKALQLNENYPEVWNARGEAFSNLKQYDQAIKSYDKAIEFNSDAYESFYNKG 472

Query: 213 FVVHKMIVPGDRERVEQSLKEFRNFVDTHSNVVEACTLFAQVLVDQEDFDGAEEYFNRSI 272
             +  M      +   +++  +   ++  S+   A       LV+   ++ A + +++++
Sbjct: 473 LALQSM------KEYNEAINAYNKAIEIKSDYERAWYNLGNSLVNLNRYEDAFKAYDKAV 526

Query: 273 RVDPENASLYVHRAMLMLQARGNVDEAIKLIEKAISIDKSCMFAYETLGTIEVQRGRLEE 332
           +   + A  ++ R  +++  R    EA++   + I  + +   A+   G  + Q  R  E
Sbjct: 527 QYKTDYAIAWLSRGNVLIILR-RYPEALESFNQVIKFNPNNYQAWYGRGWSQHQNQRYAE 585

Query: 333 AVKCFNKALPLARDEAELSHIYSLRDA---------AIAQMKVCERYNIKKKVSPRSQNI 383
           A++ + KA  +     E+   YSL ++         AIA      RY  K   S  S+  
Sbjct: 586 AIESYKKAATIKPSNYEI--WYSLGNSQYILQQYQEAIASYNKAVRYRPKHIESWYSRG- 642

Query: 384 TKNEKLAIKQLRENNDIIIRPADKGGKTVVMDKADYTQKMTS 425
             N   ++KQ +E        A    +  +  K DY+Q + +
Sbjct: 643 --NALFSLKQYKE--------AIASYEQAIKHKPDYSQAINA 674


>gi|223939851|ref|ZP_03631720.1| TPR repeat-containing protein [bacterium Ellin514]
 gi|223891443|gb|EEF57935.1| TPR repeat-containing protein [bacterium Ellin514]
          Length = 442

 Score = 64.3 bits (155), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 64/270 (23%), Positives = 123/270 (45%), Gaps = 35/270 (12%)

Query: 105 ATVYIFTSQSTKAIEDLTQLVEDTSVDPKIKVN---AHIKRAVVHLHAASDFTKAFADLD 161
           A  Y +   +  A  +L Q +ED  +D  I +    A+  R +++     +F KA  D  
Sbjct: 39  AEAYTYRGMAYAAKLELNQALED--LDTAISLGDSRAYSTRGLIY-DKKGEFDKALDDWK 95

Query: 162 EAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVA---RAQRHFVVHKM 218
           E  +++P +A +Y  RG+ Y   G  E+A+++ ++ + LNP +  A   RA  +F+  K 
Sbjct: 96  EVVRLEPKLAKAYRFRGRAYAAKGNLEQAMQDYNRALELNPKYAEAFFDRANAYFLQRKF 155

Query: 219 ------------IVPGD------RERVEQSLKEFRNFVDTHSNVV-----EACTLFAQ-- 253
                         PG+      R     +  ++   ++ +S  V     EA  L A+  
Sbjct: 156 NEAISDYTNAVQFEPGNARSFYERGEARSAKADWEQAINDYSEAVRLNSREALYLGARGF 215

Query: 254 VLVDQEDFDGAEEYFNRSIRVDPENASLYVHRAMLMLQARGNVDEAIKLIEKAISIDKSC 313
                  FD A   ++ +IR+D  +   Y  RA L+  + G +D+A+   + AI ++ + 
Sbjct: 216 ACYKTGRFDQALSDYDEAIRIDANHYKSYHGRA-LIFSSLGQLDKALMNFDVAIRLNATQ 274

Query: 314 MFAYETLGTIEVQRGRLEEAVKCFNKALPL 343
              Y   G I ++ G L++A++ +++ + L
Sbjct: 275 AQLYGGRGAICLKLGMLDQALEDYHQLIKL 304



 Score = 52.8 bits (125), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 67/265 (25%), Positives = 121/265 (45%), Gaps = 40/265 (15%)

Query: 268 FNRSIRVDPENASLYVHRAMLMLQARGNVDEAIKLIEKAISIDKSCMFAYETLGTIEVQR 327
           +N +++++P  A  Y +R M    A+  +++A++ ++ AIS+  S   AY T G I  ++
Sbjct: 28  WNAALQLNPHYAEAYTYRGM-AYAAKLELNQALEDLDTAISLGDS--RAYSTRGLIYDKK 84

Query: 328 GRLEEAVKCFNKALPLARDEAELSHIYSLRDAAIAQMKVCER----YNIKKKVSPRSQNI 383
           G  ++A+  + + + L   E +L+  Y  R  A A     E+    YN   +++P+    
Sbjct: 85  GEFDKALDDWKEVVRL---EPKLAKAYRFRGRAYAAKGNLEQAMQDYNRALELNPKYAEA 141

Query: 384 TKNEKLAIKQLRENNDII--------IRPAD------KGGKTVVMDKADYTQKMTSILNS 429
             +   A    R+ N+ I          P +      +G       KAD+ Q +      
Sbjct: 142 FFDRANAYFLQRKFNEAISDYTNAVQFEPGNARSFYERGEARSA--KADWEQAI------ 193

Query: 430 NDY-EIIPGDPTKTIEESEKYGNLENESGQKHAASDFTKAFADLDEAEKVDPNVADSYYQ 488
           NDY E +  +  + +    + G    ++G+      F +A +D DEA ++D N   SY+ 
Sbjct: 194 NDYSEAVRLNSREALYLGAR-GFACYKTGR------FDQALSDYDEAIRIDANHYKSYHG 246

Query: 489 RGQIYCLFGQYEEALRNLDKTIALN 513
           R  I+   GQ ++AL N D  I LN
Sbjct: 247 RALIFSSLGQLDKALMNFDVAIRLN 271



 Score = 50.4 bits (119), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 64/250 (25%), Positives = 110/250 (44%), Gaps = 37/250 (14%)

Query: 112 SQSTKAIEDLTQLVEDTSVDPKIKVNAHIKRAVVHLHA-------ASDFTKAFADLDEAE 164
           ++S KA  D  Q + D S    +++N+   R  ++L A          F +A +D DEA 
Sbjct: 182 ARSAKA--DWEQAINDYS--EAVRLNS---REALYLGARGFACYKTGRFDQALSDYDEAI 234

Query: 165 KVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQRHFVVHKMIVPGDR 224
           ++D N   SY+ R  I+   GQ ++AL N D  I LN         R  +  K+ +    
Sbjct: 235 RIDANHYKSYHGRALIFSSLGQLDKALMNFDVAIRLNATQAQLYGGRGAICLKLGM---- 290

Query: 225 ERVEQSLKEFRNFVDTHSNVVEACTLFAQVLVDQEDFDGAEEYFNRSIRVDPENASLYVH 284
             ++Q+L+++   +             A V   + +F  A +    S+ +DP   S+  H
Sbjct: 291 --LDQALEDYHQLIKLDPKNAMGYMARAAVHARKGEFKKALDDSLESVWLDP--ISVKTH 346

Query: 285 RAMLMLQARGNVD------EAIKLIEKAISIDKSCMFAYETLGTI-----EVQRGRLEEA 333
            ++  L A   +D      EA ++ +KA   D S    + ++ T+     EVQ  R +EA
Sbjct: 347 NSLAWLLATCPLDSIRNGREAFEIAQKA--CDLSAWSDWRSIDTLAAACAEVQ--RFDEA 402

Query: 334 VKCFNKALPL 343
           V    +AL +
Sbjct: 403 VDYQTRALAM 412



 Score = 43.1 bits (100), Expect = 0.33,   Method: Compositional matrix adjust.
 Identities = 39/209 (18%), Positives = 92/209 (44%), Gaps = 9/209 (4%)

Query: 140 IKRAVVHLHAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIA 199
           +K+  +      ++  + +  + A +++P+ A++Y  RG  Y    +  +AL +LD  I+
Sbjct: 8   LKKQAIKAEVDGNYDLSISRWNAALQLNPHYAEAYTYRGMAYAAKLELNQALEDLDTAIS 67

Query: 200 LNPNFHVARAQRHFVVHKMIVPGDRERVEQSLKEFRNFVDTHSNVVEACTLFAQVLVDQE 259
           L  +       R +    +I     E  +++L +++  V     + +A     +    + 
Sbjct: 68  LGDS-------RAYSTRGLIYDKKGE-FDKALDDWKEVVRLEPKLAKAYRFRGRAYAAKG 119

Query: 260 DFDGAEEYFNRSIRVDPENASLYVHRAMLMLQARGNVDEAIKLIEKAISIDKSCMFAYET 319
           + + A + +NR++ ++P+ A  +  RA      R   +EAI     A+  +     ++  
Sbjct: 120 NLEQAMQDYNRALELNPKYAEAFFDRANAYFLQR-KFNEAISDYTNAVQFEPGNARSFYE 178

Query: 320 LGTIEVQRGRLEEAVKCFNKALPLARDEA 348
            G     +   E+A+  +++A+ L   EA
Sbjct: 179 RGEARSAKADWEQAINDYSEAVRLNSREA 207



 Score = 42.0 bits (97), Expect = 0.78,   Method: Compositional matrix adjust.
 Identities = 21/67 (31%), Positives = 38/67 (56%), Gaps = 3/67 (4%)

Query: 463 SDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVA--- 519
            +F KA  D  E  +++P +A +Y  RG+ Y   G  E+A+++ ++ + LNP +  A   
Sbjct: 85  GEFDKALDDWKEVVRLEPKLAKAYRFRGRAYAAKGNLEQAMQDYNRALELNPKYAEAFFD 144

Query: 520 RAQRHFV 526
           RA  +F+
Sbjct: 145 RANAYFL 151


>gi|355572129|ref|ZP_09043311.1| Tetratricopeptide TPR_2 repeat-containing protein [Methanolinea
           tarda NOBI-1]
 gi|354824845|gb|EHF09084.1| Tetratricopeptide TPR_2 repeat-containing protein [Methanolinea
           tarda NOBI-1]
          Length = 660

 Score = 64.3 bits (155), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 88/421 (20%), Positives = 157/421 (37%), Gaps = 62/421 (14%)

Query: 155 KAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQRHFV 214
           +A +  D+A  +DP+      ++ Q+    G+ EEAL  +D+ + L P          + 
Sbjct: 214 EALSSYDQALGIDPDSTSVLSKKAQVLAALGRTEEALSTIDRILVLEP------GNATYW 267

Query: 215 VHKMIVPGDRERVEQSLKEFRNFVDTHSNVVEACTLFAQVLVDQEDFDGAEEYFNRSIRV 274
           VHK  +  +  R  +SL      +    N   A             F  A   ++++I +
Sbjct: 268 VHKSFLLNNLGRFNESLDASGTAISLEPNNAVAWNNRGFSYNSLGMFGDAVSAYSQAIAI 327

Query: 275 DPENASLYVHRAMLMLQ------ARGNVDEAIKL-------------------------- 302
           DP N + Y +R   +L       A G++D A  L                          
Sbjct: 328 DPGNPAAYTNRGFALLNLGKGEDALGDLDRATTLQPDLATAWSYRALADYRLGRFTEALD 387

Query: 303 -IEKAISIDKSCMFAYETLGTIEVQRGRLEEAVKCFNKALPLARDEAELSHIYSLRDAAI 361
              +A  ++     A+ T G   +Q+G  ++A+  F+KAL L       S I+  +  A+
Sbjct: 388 DASRATRLNPRDSLAWSTGGMALLQKGEFQKAIPYFDKALTL---NPNASDIWLNKGIAL 444

Query: 362 AQMKVCER----YNIKKKVSPRSQNITKNEKLAIKQLRENNDIIIRPADKGGKTVVMDKA 417
              K  E      +   ++ P S    + +  A++ L    + +    D+  KT   +  
Sbjct: 445 YMAKNNEEALSALDRVLELDPESMTAWQYKVYALRALGRGEEAVW-ITDRQLKTDSWNTT 503

Query: 418 DYTQKMTSILNSNDY--------EIIPGDPTKTIEESEKYGNLENESGQKHAASDFTKAF 469
              +K T+++  N           I+  DP+        Y  L      + A+ D+  A 
Sbjct: 504 LLLRKATALVILNRMGEAQLALSRILEKDPS-------NYEALVARGKIQIASGDYLGAI 556

Query: 470 ADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQRHFVWTS 529
              D  +K  P+  +S    G  Y   GQYE+AL   DK +  +P   +  + R +    
Sbjct: 557 RTFDVLQKTMPDADESLIFLGVAYYRSGQYEKALAVYDKLLKKDPANSLTWSNRGYALVK 616

Query: 530 T 530
           T
Sbjct: 617 T 617



 Score = 62.0 bits (149), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 72/370 (19%), Positives = 157/370 (42%), Gaps = 56/370 (15%)

Query: 153 FTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQRH 212
           F  A +   +A  +DP    +Y  RG      G+ E+AL +LD+   L P+   A + R 
Sbjct: 314 FGDAVSAYSQAIAIDPGNPAAYTNRGFALLNLGKGEDALGDLDRATTLQPDLATAWSYRA 373

Query: 213 FVVHKMIVPGDRERVEQSLKEFRNFVDTHSNVVEACTLFAQVLVDQEDFDGAEEYFNRSI 272
              +++       R  ++L +       +     A +     L+ + +F  A  YF++++
Sbjct: 374 LADYRL------GRFTEALDDASRATRLNPRDSLAWSTGGMALLQKGEFQKAIPYFDKAL 427

Query: 273 RVDPENASLYVHRAMLMLQARGNVDEAIKLIEKAISIDKSCMFAYETLGTIEVQRGRLEE 332
            ++P  + +++++ + +  A+ N +EA+  +++ + +D   M A++         GR EE
Sbjct: 428 TLNPNASDIWLNKGIALYMAKNN-EEALSALDRVLELDPESMTAWQYKVYALRALGRGEE 486

Query: 333 AVKCFNKALPLARDEAELSHIYSLRDAAIAQMKVCERYN----IKKKVSPRSQNITKNEK 388
           AV   ++                       Q+K  + +N    ++K  +    N     +
Sbjct: 487 AVWITDR-----------------------QLK-TDSWNTTLLLRKATALVILNRMGEAQ 522

Query: 389 LAIKQLRENNDIIIRPADKGGKTVVMDKADYTQKMTSILNSNDYEIIPGDPTKTIEESEK 448
           LA+ ++ E +          GK + +   DY   + +      ++++     KT+ ++++
Sbjct: 523 LALSRILEKDPSNYEALVARGK-IQIASGDYLGAIRT------FDVL----QKTMPDADE 571

Query: 449 ----YGNLENESGQKHAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALR 504
                G     SGQ      + KA A  D+  K DP  + ++  RG      G+ ++A++
Sbjct: 572 SLIFLGVAYYRSGQ------YEKALAVYDKLLKKDPANSLTWSNRGYALVKTGRIQDAIK 625

Query: 505 NLDKTIALNP 514
           + D+ + L+P
Sbjct: 626 SFDRALELDP 635



 Score = 55.5 bits (132), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 79/376 (21%), Positives = 151/376 (40%), Gaps = 20/376 (5%)

Query: 147 LHAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHV 206
           LH     ++AF  L+ +  +DP+ A  +   G +     Q  +A +  D+ IAL+ N   
Sbjct: 70  LHLMGRESEAFESLNRSLALDPSSASRWVALGDVLLAMDQNYDAAQAYDRAIALDINITT 129

Query: 207 ARAQRHFVVHKMIVPGDRERVEQSLKEFRNFVDTHSNVVEACTLFAQVLVDQEDFDGAEE 266
           A         +M       +  ++ + F   + T+ +   A       LV  + +  A  
Sbjct: 130 AWNGIGTAYSRM------GKYTEARQFFLAALRTNGSYAPAAKNLGDTLVALQLWGEALR 183

Query: 267 YFNRSIRVDPENASLYVHRAMLMLQARGNVDEAIKLIEKAISIDKSCMFAYETLGTIEVQ 326
            +++++ +DP  AS  V R  L L   G   EA+   ++A+ ID            +   
Sbjct: 184 AYDQALAMDPALASAAVARGDL-LSRFGRNGEALSSYDQALGIDPDSTSVLSKKAQVLAA 242

Query: 327 RGRLEEAVKCFNKALPLARDEAELSHIYSLRDAAIAQMKVCERYNIKKKVSPRSQNITKN 386
            GR EEA+   ++ L L    A     Y +  + +  +    R+N     S  + ++  N
Sbjct: 243 LGRTEEALSTIDRILVLEPGNA----TYWVHKSFL--LNNLGRFNESLDASGTAISLEPN 296

Query: 387 EKLAI--KQLRENNDIIIRPADKG-GKTVVMD---KADYTQKMTSILNSNDYEIIPGDPT 440
             +A   +    N+  +   A     + + +D    A YT +  ++LN    E   GD  
Sbjct: 297 NAVAWNNRGFSYNSLGMFGDAVSAYSQAIAIDPGNPAAYTNRGFALLNLGKGEDALGDLD 356

Query: 441 K-TIEESEKYGNLENESGQKHAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQY 499
           + T  + +        +   +    FT+A  D   A +++P  + ++   G      G++
Sbjct: 357 RATTLQPDLATAWSYRALADYRLGRFTEALDDASRATRLNPRDSLAWSTGGMALLQKGEF 416

Query: 500 EEALRNLDKTIALNPN 515
           ++A+   DK + LNPN
Sbjct: 417 QKAIPYFDKALTLNPN 432



 Score = 48.9 bits (115), Expect = 0.008,   Method: Compositional matrix adjust.
 Identities = 56/284 (19%), Positives = 117/284 (41%), Gaps = 39/284 (13%)

Query: 98  ALARLLRATVY---IFTSQSTKAIED-----LTQLVEDTSVDPKIKVNAHIKRAV--VHL 147
           AL  L RAT     + T+ S +A+ D      T+ ++D S   ++     +  +   + L
Sbjct: 351 ALGDLDRATTLQPDLATAWSYRALADYRLGRFTEALDDASRATRLNPRDSLAWSTGGMAL 410

Query: 148 HAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVA 207
               +F KA    D+A  ++PN +D +  +G    +    EEAL  LD+ + L+P    A
Sbjct: 411 LQKGEFQKAIPYFDKALTLNPNASDIWLNKGIALYMAKNNEEALSALDRVLELDPESMTA 470

Query: 208 RAQRHFVVHKM------IVPGDRE----------------------RVEQSLKEFRNFVD 239
              + + +  +      +   DR+                      R+ ++       ++
Sbjct: 471 WQYKVYALRALGRGEEAVWITDRQLKTDSWNTTLLLRKATALVILNRMGEAQLALSRILE 530

Query: 240 THSNVVEACTLFAQVLVDQEDFDGAEEYFNRSIRVDPENASLYVHRAMLMLQARGNVDEA 299
              +  EA     ++ +   D+ GA   F+   +  P+     +   +   ++ G  ++A
Sbjct: 531 KDPSNYEALVARGKIQIASGDYLGAIRTFDVLQKTMPDADESLIFLGVAYYRS-GQYEKA 589

Query: 300 IKLIEKAISIDKSCMFAYETLGTIEVQRGRLEEAVKCFNKALPL 343
           + + +K +  D +    +   G   V+ GR+++A+K F++AL L
Sbjct: 590 LAVYDKLLKKDPANSLTWSNRGYALVKTGRIQDAIKSFDRALEL 633


>gi|422304613|ref|ZP_16391955.1| Tetratricopeptide repeat protein (fragment) [Microcystis aeruginosa
           PCC 9806]
 gi|389790204|emb|CCI13881.1| Tetratricopeptide repeat protein (fragment) [Microcystis aeruginosa
           PCC 9806]
          Length = 917

 Score = 64.3 bits (155), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 98/435 (22%), Positives = 175/435 (40%), Gaps = 79/435 (18%)

Query: 118 IEDLTQLVEDTSVDPKIKVNAHIKRAVVHLHAASDFTKAFADLDEAEKVDPNV---ADSY 174
           I     L E   V P++   A  +   V      + ++A A +     + PN    AD +
Sbjct: 496 ISTFIGLQERLKVKPQLLTTAQPQ---VSPQQKQEISQAIAGI-----IVPNTTAKADIW 547

Query: 175 YQRGQIYCLFGQYEEALRNLDKTIALN--PNFHVARAQRHFVVHKM----IVPGDR---- 224
            +RG      G+YEEA++  D+ I  N   N ++A   +   +       +   D+    
Sbjct: 548 IERGGQLWRLGRYEEAIKAFDEAIKQNDPKNVYLAWYGKGLALWYWKGLALFALDKDQPA 607

Query: 225 -ERVEQSL------KEFRNFVDTHSNVVEACTLFAQVLVDQEDFDGAEEYFNRSIRVDPE 277
            E ++Q++      ++ +NF   HS++++  ++  + L   E+++ A    N++I + P 
Sbjct: 608 IEALQQAINTLPKGEDLKNF---HSSILQQQSVVYRSL---ENYEQALTVINQAISLFPN 661

Query: 278 NASLYVHRAMLMLQARGNVDEAIKLIEKAISIDKSCMFAYETLGTIEVQRGRLEEAVKCF 337
           N + Y  + +++ + +   DE +  I +AI +     + Y   G +     + E A+  F
Sbjct: 662 NPNYYNEKYVVLSELK-RYDEGLATINQAIHLAPRAAW-YNNRGLVYQDLQKYELALDDF 719

Query: 338 NKALPLARDEAELSHIYSLRDAAIAQMK----VCERYNIKKKVSPRSQNITKNEKLAIKQ 393
           NKA+ L      L+  Y+ R    +  +        YN   +++P   N   N  L    
Sbjct: 720 NKAIDL---NPNLAMAYNNRGNIYSNQQKYDLALSDYNQAIRINPNYANAYYNRGLLY-- 774

Query: 394 LRENNDIIIRPADKGGKTVVMDKADYTQKMTSILNSNDYEIIPGDPTKTIEESEKYG-NL 452
                                    Y QK         YE+   D  K IE   K     
Sbjct: 775 -------------------------YYQK--------KYELALADFNKAIELDSKLAMAY 801

Query: 453 ENESGQKHAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIAL 512
            N     +    +  A AD ++A ++D N A +Y  RG +Y    +Y+ AL + +K I L
Sbjct: 802 LNRGLLYYYQQKYELALADFNKAIELDSNDAVAYNNRGVLYSDLQKYDLALSDWNKAIEL 861

Query: 513 NPNFHVARAQRHFVW 527
           NPNF  A A R  ++
Sbjct: 862 NPNFAEAYANRGLLY 876



 Score = 63.9 bits (154), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 46/174 (26%), Positives = 85/174 (48%), Gaps = 7/174 (4%)

Query: 156 AFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQRHFVV 215
           A +D ++A +++PN A++YY RG +Y    +YE AL + +K I L+    +A   R  + 
Sbjct: 749 ALSDYNQAIRINPNYANAYYNRGLLYYYQKKYELALADFNKAIELDSKLAMAYLNRGLLY 808

Query: 216 HKMIVPGDRERVEQSLKEFRNFVDTHSNVVEACTLFAQVLVDQEDFDGAEEYFNRSIRVD 275
           +       +++ E +L +F   ++  SN   A      +  D + +D A   +N++I ++
Sbjct: 809 YY------QQKYELALADFNKAIELDSNDAVAYNNRGVLYSDLQKYDLALSDWNKAIELN 862

Query: 276 PENASLYVHRAMLMLQARGNVDEAIKLIEKAISI-DKSCMFAYETLGTIEVQRG 328
           P  A  Y +R +L  + +      I L + AI    ++ M  YE +  I  Q G
Sbjct: 863 PNFAEAYANRGLLYAELKQTEKAKIDLQQAAILFRQQNNMATYEQVMQILQQLG 916



 Score = 59.3 bits (142), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 54/220 (24%), Positives = 103/220 (46%), Gaps = 11/220 (5%)

Query: 153 FTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQRH 212
           + +  A +++A  + P  A  Y  RG +Y    +YE AL + +K I LNPN  +A   R 
Sbjct: 679 YDEGLATINQAIHLAPRAA-WYNNRGLVYQDLQKYELALDDFNKAIDLNPNLAMAYNNRG 737

Query: 213 FVVHKMIVPGDRERVEQSLKEFRNFVDTHSNVVEACTLFAQVLVDQEDFDGAEEYFNRSI 272
            +        ++++ + +L ++   +  + N   A      +   Q+ ++ A   FN++I
Sbjct: 738 NIYS------NQQKYDLALSDYNQAIRINPNYANAYYNRGLLYYYQKKYELALADFNKAI 791

Query: 273 RVDPENASLYVHRAMLMLQARGNVDEAIKLIEKAISIDKSCMFAYETLGTIEVQRGRLEE 332
            +D + A  Y++R +L    +   + A+    KAI +D +   AY   G +     + + 
Sbjct: 792 ELDSKLAMAYLNRGLLYYYQQ-KYELALADFNKAIELDSNDAVAYNNRGVLYSDLQKYDL 850

Query: 333 AVKCFNKALPLARDEAELSHIYSLRDAAIAQMKVCERYNI 372
           A+  +NKA+ L  + AE    Y+ R    A++K  E+  I
Sbjct: 851 ALSDWNKAIELNPNFAE---AYANRGLLYAELKQTEKAKI 887



 Score = 53.1 bits (126), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 33/115 (28%), Positives = 62/115 (53%), Gaps = 5/115 (4%)

Query: 104 RATVYIFTSQSTKAIEDLTQLVEDTSVDPKIKVNAHIKRAVVHLHAASDFTKAFADLDEA 163
           R  +Y +  +   A+ D  + +E   +D K+ + A++ R +++ +    +  A AD ++A
Sbjct: 770 RGLLYYYQKKYELALADFNKAIE---LDSKLAM-AYLNRGLLYYYQ-QKYELALADFNKA 824

Query: 164 EKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQRHFVVHKM 218
            ++D N A +Y  RG +Y    +Y+ AL + +K I LNPNF  A A R  +  ++
Sbjct: 825 IELDSNDAVAYNNRGVLYSDLQKYDLALSDWNKAIELNPNFAEAYANRGLLYAEL 879


>gi|72382664|ref|YP_292019.1| TPR repeat-containing protein [Prochlorococcus marinus str. NATL2A]
 gi|72002514|gb|AAZ58316.1| TPR repeat [Prochlorococcus marinus str. NATL2A]
          Length = 739

 Score = 64.3 bits (155), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 52/204 (25%), Positives = 101/204 (49%), Gaps = 13/204 (6%)

Query: 140 IKRAVVHLHAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIA 199
           I R + +L  A  +T+      +A K++PN A +Y   G +    G+ ++A  +  K I 
Sbjct: 111 ILRDLGNLQDAELYTR------KAIKINPNYALAYSNLGNVLKDLGKSQDAELSYRKAIQ 164

Query: 200 LNPNFHVARAQRHFVVHKMIVPGDRERVEQSLKEFRNFVDTHSNVVEACTLFAQVLVDQE 259
           +NPN+  A      ++ ++   G+ +  E S   +R  +  + N  +A +    VL D +
Sbjct: 165 INPNYADAHYNLGIILKEL---GNLQDAELS---YRKAIQINPNYADAYSNLGNVLKDLD 218

Query: 260 DFDGAEEYFNRSIRVDPENASLYVHRAMLMLQARGNVDEAIKLIEKAISIDKSCMFAYET 319
           +   AE  + ++I+++P++A  Y +    +L+  GN+ +A     KAI I+     A+  
Sbjct: 219 NLQDAELSYRKAIQINPDHADAYSNLGN-VLKDLGNLQDAELSYRKAIQINPDHAEAHFN 277

Query: 320 LGTIEVQRGRLEEAVKCFNKALPL 343
           LG +    G+L+EA K   K++ +
Sbjct: 278 LGNLLKDLGKLQEAKKVLKKSIEI 301



 Score = 52.8 bits (125), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 37/153 (24%), Positives = 80/153 (52%), Gaps = 7/153 (4%)

Query: 162 EAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQRHFVVHKMIVP 221
           +A +++PN AD++Y  G I    G  ++A  +  K I +NPN+  A +    V+      
Sbjct: 161 KAIQINPNYADAHYNLGIILKELGNLQDAELSYRKAIQINPNYADAYSNLGNVLK----- 215

Query: 222 GDRERVEQSLKEFRNFVDTHSNVVEACTLFAQVLVDQEDFDGAEEYFNRSIRVDPENASL 281
            D + ++ +   +R  +  + +  +A +    VL D  +   AE  + ++I+++P++A  
Sbjct: 216 -DLDNLQDAELSYRKAIQINPDHADAYSNLGNVLKDLGNLQDAELSYRKAIQINPDHAEA 274

Query: 282 YVHRAMLMLQARGNVDEAIKLIEKAISIDKSCM 314
           + +   L L+  G + EA K+++K+I I+ + +
Sbjct: 275 HFNLGNL-LKDLGKLQEAKKVLKKSIEIEPNNL 306



 Score = 39.3 bits (90), Expect = 5.9,   Method: Compositional matrix adjust.
 Identities = 34/142 (23%), Positives = 65/142 (45%), Gaps = 9/142 (6%)

Query: 235 RNFVDTHSNVVEACTLFAQVLVDQEDFDGAEEYFNRSIRVDPENASLYVHRAMLMLQARG 294
           R  +  + N   A +    VL D      AE  + ++I+++P  A  + +  ++ L+  G
Sbjct: 126 RKAIKINPNYALAYSNLGNVLKDLGKSQDAELSYRKAIQINPNYADAHYNLGII-LKELG 184

Query: 295 NVDEAIKLIEKAISIDKSCMFAYETLGTIEVQRGRLEEAVKCFNKALPLARDEAE----- 349
           N+ +A     KAI I+ +   AY  LG +      L++A   + KA+ +  D A+     
Sbjct: 185 NLQDAELSYRKAIQINPNYADAYSNLGNVLKDLDNLQDAELSYRKAIQINPDHADAYSNL 244

Query: 350 ---LSHIYSLRDAAIAQMKVCE 368
              L  + +L+DA ++  K  +
Sbjct: 245 GNVLKDLGNLQDAELSYRKAIQ 266


>gi|440748969|ref|ZP_20928219.1| hypothetical protein C943_0783 [Mariniradius saccharolyticus AK6]
 gi|436482671|gb|ELP38769.1| hypothetical protein C943_0783 [Mariniradius saccharolyticus AK6]
          Length = 476

 Score = 64.3 bits (155), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 45/177 (25%), Positives = 84/177 (47%), Gaps = 7/177 (3%)

Query: 167 DPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQRHFVVHKMIVPGDRER 226
           DP  A ++Y  G +Y   G++EEA++  D  + ++  F    A  +F +    +  + ++
Sbjct: 199 DPYSAGAWYNLGVVYNRLGRFEEAIKAYDYALIIDDAF----ASAYFNLGNAYM--NTQQ 252

Query: 227 VEQSLKEFRNFVDTHSNVVEACTLFAQVLVDQEDFDGAEEYFNRSIRVDPENASLYVHRA 286
            E +L+ ++N ++      E C          E+ D A +YF +S ++DPE    +    
Sbjct: 253 YELALEAYQNTINCEGANAENCCYLGAAYEKLENIDQAFKYFKKSAKIDPEYDDAWFGLG 312

Query: 287 MLMLQARGNVDEAIKLIEKAISIDKSCMFAYETLGTIEVQRGRLEEAVKCFNKALPL 343
           M ML+ +    EAI    KA++I K     +  L   E Q G L+ + + + +A+ L
Sbjct: 313 MCMLK-KEKYFEAIHYFRKALNITKENPNYWVGLADAEYQLGNLQASSEAYEEAINL 368



 Score = 44.3 bits (103), Expect = 0.18,   Method: Compositional matrix adjust.
 Identities = 39/178 (21%), Positives = 75/178 (42%), Gaps = 14/178 (7%)

Query: 155 KAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIAL---NPNFHVARAQR 211
           +AF    ++ K+DP   D+++  G       +Y EA+    K + +   NPN+ V  A  
Sbjct: 289 QAFKYFKKSAKIDPEYDDAWFGLGMCMLKKEKYFEAIHYFRKALNITKENPNYWVGLADA 348

Query: 212 HFVVHKMIVPGDRERVEQSLKEFRNFVDTHSNVVEACTLFAQVLVDQEDFDGAEEYFNRS 271
            + +  +         + S + +   ++    ++E     A +  DQ  F+ A +     
Sbjct: 349 EYQLGNL---------QASSEAYEEAINLEPGIMETYVNLAIIYFDQNRFEEAVDVMKEG 399

Query: 272 IRVDPENASLYVHRAMLMLQARGNVDEAIKLIEKAISID-KSCMFAYETLGTIEVQRG 328
           I   P  A LY +R ++ L       EA   +E A+++D    +  YE +  I+ Q+ 
Sbjct: 400 IEELPGEAELY-YRMVVFLLKTAKYTEAFSYLENALTLDFGKHVILYELMPEIKKQKA 456


>gi|427725700|ref|YP_007072977.1| serine/threonine protein kinase [Leptolyngbya sp. PCC 7376]
 gi|427357420|gb|AFY40143.1| serine/threonine protein kinase [Leptolyngbya sp. PCC 7376]
          Length = 754

 Score = 64.3 bits (155), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 74/311 (23%), Positives = 135/311 (43%), Gaps = 37/311 (11%)

Query: 43  DGLSNGVELTNGDTNESHELDLLSKAKRAFEHEDYLTAIRHCTEEIESTSSNHTKALARL 102
           + L++  E+ N D   SH+  LL KA+   + + Y  A+    +E+   S N  +A    
Sbjct: 384 NALASYQEVLNQDA--SHQGALLGKAQVLQQLQRYDEALA-TYDELLQLSPNDWEAW--W 438

Query: 103 LRATVYIFTSQSTKAIEDLTQLVEDTSVDPKIKVNAHIKRAVVHLHAASDFTKAFADLDE 162
            R  +Y    Q  +AI  L + ++    + +I       +A +HL A  D   A   L+ 
Sbjct: 439 GRGKIYSDRQQYGQAITSLNRAIQGNGNNLEIWQT----KAQIHL-AQDDRENALRSLEA 493

Query: 163 AEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALN---PNFHVARAQRHFVVHKMI 219
             K+D   A ++Y++G I+    QY+EA+   D+ + +N   PN    +   +F      
Sbjct: 494 VLKLDSRQAWAWYEKGWIHHQQEQYKEAIAAYDRALRINNSDPNIWYQKGNSYF------ 547

Query: 220 VPGDRERVEQSLKEFRNFVDTHSNVVE-----ACTLFAQVLV--DQEDFDGAEEYFNRSI 272
                      L  ++   + +  VV+     A   ++Q +   + E F  A++ F + +
Sbjct: 548 ----------KLANYQEAKNAYGRVVKLKPDHAPAWYSQGIAFENLEKFRDAQQSFTKVV 597

Query: 273 RVDPENASLYVHRAMLMLQARGNVDEAIKLIEKAISIDKSCMFAYETLGTIEVQRGRLEE 332
            ++PEN   + H A    QA  N D AI    + +SI  +   ++  LG +  +     E
Sbjct: 598 ELEPENDRAWYHLAWNAQQAN-NRDTAIMAYRRTVSIKGNDHSSWVNLGNLFYEAKNYPE 656

Query: 333 AVKCFNKALPL 343
           A+  + +AL L
Sbjct: 657 AIAAYERALAL 667



 Score = 54.3 bits (129), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 67/348 (19%), Positives = 152/348 (43%), Gaps = 20/348 (5%)

Query: 175 YQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQRHFVVHKMIVPGDRERVEQSLKEF 234
           Y++GQ+Y   G+ E AL +  + +  + +   A   +  V+ ++      +R +++L  +
Sbjct: 370 YEQGQVYQELGEAENALASYQEVLNQDASHQGALLGKAQVLQQL------QRYDEALATY 423

Query: 235 RNFVDTHSNVVEACTLFAQVLVDQEDFDGAEEYFNRSIRVDPENASLYVHRAMLMLQARG 294
              +    N  EA     ++  D++ +  A    NR+I+ +  N  ++  +A + L A+ 
Sbjct: 424 DELLQLSPNDWEAWWGRGKIYSDRQQYGQAITSLNRAIQGNGNNLEIWQTKAQIHL-AQD 482

Query: 295 NVDEAIKLIEKAISIDKSCMFAYETLGTIEVQRGRLEEAVKCFNKALPLARDEAELSHIY 354
           + + A++ +E  + +D    +A+   G I  Q+ + +EA+  +++AL +   +  + +  
Sbjct: 483 DRENALRSLEAVLKLDSRQAWAWYEKGWIHHQQEQYKEAIAAYDRALRINNSDPNIWYQK 542

Query: 355 SLRDAAIAQMKVCER-YNIKKKVSPRSQNITKNEKLAIKQLRENNDIIIRPADKGGKTVV 413
                 +A  +  +  Y    K+ P       ++ +A + L +      R A +    VV
Sbjct: 543 GNSYFKLANYQEAKNAYGRVVKLKPDHAPAWYSQGIAFENLEK-----FRDAQQSFTKVV 597

Query: 414 -----MDKADYTQKMTSI-LNSNDYEIIPGDPTKTIEESEKYGNLENESGQKHAASDFTK 467
                 D+A Y     +   N+ D  I+    T +I+ ++ + +  N     + A ++ +
Sbjct: 598 ELEPENDRAWYHLAWNAQQANNRDTAIMAYRRTVSIKGND-HSSWVNLGNLFYEAKNYPE 656

Query: 468 AFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPN 515
           A A  + A  +     +S+  +G  + L G Y EA+   D+ +   P 
Sbjct: 657 AIAAYERALALKTQDGNSWELKGNSHLLIGDYAEAIAAYDQALQYKPG 704



 Score = 47.8 bits (112), Expect = 0.014,   Method: Compositional matrix adjust.
 Identities = 48/214 (22%), Positives = 91/214 (42%), Gaps = 28/214 (13%)

Query: 138 AHIKRAVVHLHAASDFTKAFADLDEAEKV---DPNVADSYYQRGQIYCLFGQYEEALRNL 194
           A  ++  +H H    + +A A  D A ++   DPN+   +YQ+G  Y     Y+EA    
Sbjct: 504 AWYEKGWIH-HQQEQYKEAIAAYDRALRINNSDPNI---WYQKGNSYFKLANYQEAKNAY 559

Query: 195 DKTIALNPNFHVARAQRHFVVHKMIVPGDRERVEQSLKEFRNFVDTHSNVVE-------A 247
            + + L P+   A   +                 ++L++FR+   + + VVE       A
Sbjct: 560 GRVVKLKPDHAPAWYSQGIAF-------------ENLEKFRDAQQSFTKVVELEPENDRA 606

Query: 248 CTLFAQVLVDQEDFDGAEEYFNRSIRVDPENASLYVHRAMLMLQARGNVDEAIKLIEKAI 307
               A       + D A   + R++ +   + S +V+   L  +A+ N  EAI   E+A+
Sbjct: 607 WYHLAWNAQQANNRDTAIMAYRRTVSIKGNDHSSWVNLGNLFYEAK-NYPEAIAAYERAL 665

Query: 308 SIDKSCMFAYETLGTIEVQRGRLEEAVKCFNKAL 341
           ++      ++E  G   +  G   EA+  +++AL
Sbjct: 666 ALKTQDGNSWELKGNSHLLIGDYAEAIAAYDQAL 699


>gi|72382794|ref|YP_292149.1| TPR repeat-containing protein [Prochlorococcus marinus str. NATL2A]
 gi|72002644|gb|AAZ58446.1| TPR repeat [Prochlorococcus marinus str. NATL2A]
          Length = 637

 Score = 64.3 bits (155), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 63/257 (24%), Positives = 124/257 (48%), Gaps = 12/257 (4%)

Query: 160 LDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQRHFVVHKMI 219
           L +A ++ PN A++YY  G I    G+ +EA  +  K I + P++    A+ H+ +  ++
Sbjct: 136 LRKAIEIKPNYAEAYYNLGNILKDLGKLKEAEISYRKAIEIKPDY----AKAHYNLGNLL 191

Query: 220 VPGDRERVEQSLKEFRNFVDTHSNVVEACTLFAQVLVDQEDFDGAEEYFNRSIRVDPENA 279
              D  +++++   +   +    +  +A +    +L +  +   AE  + ++I ++P  A
Sbjct: 192 --KDNGKLKEAELSYLKAIGIKPDYAKAHSNLGNLLRELGNLQEAEMSYRKAIELNPTFA 249

Query: 280 SLYVHRAMLMLQARGNVDEAIKLIEKAISIDKSCMFAYETLGTIEVQRGRLEEAVKCFNK 339
             + +   L L+  GN+ EA     KAI I      A+  LG +  + G L+EA   + K
Sbjct: 250 EAHYNLGNL-LKELGNLQEAEMSYRKAIEIKPDYAEAHSNLGNLLRELGNLQEAEMSYRK 308

Query: 340 ALPLARDEAE----LSHIYSLRDAAIAQMKVCERYNIKKKVSPRSQNITKNEKLAIKQLR 395
           A+ +  D AE    LS +  L+   I  ++  E +  KKK    +Q ITK +++  K+L+
Sbjct: 309 AIEIKPDYAEAFWNLSLVELLQGDYINGLENYE-FRFKKKKPTITQCITKLKRIEHKKLQ 367

Query: 396 ENNDIIIRPADKGGKTV 412
           +   +++      G T+
Sbjct: 368 KGEKLLVVTEQGLGDTL 384



 Score = 50.8 bits (120), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 53/229 (23%), Positives = 106/229 (46%), Gaps = 22/229 (9%)

Query: 155 KAFADLDEAE-------KVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVA 207
           K+   L EAE       ++ P+ A+ +   G I     + +EA  +L K I + PN+   
Sbjct: 90  KSLGKLKEAELSTQKAIEIKPDFAEMHSNLGNILRDLDKLKEAEISLRKAIEIKPNY--- 146

Query: 208 RAQRHFVVHKMIVPGDRERVEQSLKEFRNFVDTHSNVVEACTLFAQVLVDQEDFDGAEEY 267
            A+ ++ +  ++   D  +++++   +R  ++   +  +A      +L D      AE  
Sbjct: 147 -AEAYYNLGNIL--KDLGKLKEAEISYRKAIEIKPDYAKAHYNLGNLLKDNGKLKEAELS 203

Query: 268 FNRSIRVDPENASLYVHRAMLMLQARGNVDEAIKLIEKAISIDKSCMFAYETLGTIEVQR 327
           + ++I + P+ A  + +   L L+  GN+ EA     KAI ++ +   A+  LG +  + 
Sbjct: 204 YLKAIGIKPDYAKAHSNLGNL-LRELGNLQEAEMSYRKAIELNPTFAEAHYNLGNLLKEL 262

Query: 328 GRLEEAVKCFNKALPLARDEAE--------LSHIYSLRDAAIAQMKVCE 368
           G L+EA   + KA+ +  D AE        L  + +L++A ++  K  E
Sbjct: 263 GNLQEAEMSYRKAIEIKPDYAEAHSNLGNLLRELGNLQEAEMSYRKAIE 311


>gi|301311081|ref|ZP_07217010.1| TPR-domain containing protein [Bacteroides sp. 20_3]
 gi|423339054|ref|ZP_17316795.1| pentatricopeptide repeat domain-containing protein [Parabacteroides
           distasonis CL09T03C24]
 gi|300831144|gb|EFK61785.1| TPR-domain containing protein [Bacteroides sp. 20_3]
 gi|409231699|gb|EKN24549.1| pentatricopeptide repeat domain-containing protein [Parabacteroides
           distasonis CL09T03C24]
          Length = 321

 Score = 64.3 bits (155), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 51/189 (26%), Positives = 90/189 (47%), Gaps = 17/189 (8%)

Query: 101 RLLRATVYIFTSQSTKAIEDLTQLVEDTSVDPKIKVNAHIKRAVVHLHAASDFTKAFADL 160
           RL R  +     +  + I D   ++E   ++P   V A+   A     A +D   A ADL
Sbjct: 99  RLTRVNLLFMLDKDAEVITDCLHVIE---LEPSNHV-AYFMMAKAK-KATNDVFGAIADL 153

Query: 161 DEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNP---NFHVARAQRHFVVHK 217
             +  +  + ADSY  R +I    GQ +EAL +++K I + P   + ++ R + H  +  
Sbjct: 154 TRSISLKEDFADSYLLRAEILLGLGQAKEALPDVEKAIEIVPEEESSYLLRGRIHMAL-- 211

Query: 218 MIVPGDRERVEQSLKEFRNFVDTHSNVVEACTLFAQVLVDQEDFDGAEEYFNRSIRVDPE 277
               GD   +E +  +F+  +D +    +AC L  Q+L++Q+ +D A  +F+ +I  +P 
Sbjct: 212 ----GD---IEAANSDFQQVLDLNPFNEDACILSGQLLIEQKKYDEAIAFFDEAIETNPS 264

Query: 278 NASLYVHRA 286
            A  Y  R 
Sbjct: 265 FAKAYSERG 273


>gi|253998548|ref|YP_003050611.1| hypothetical protein Msip34_0836 [Methylovorus glucosetrophus
           SIP3-4]
 gi|253985227|gb|ACT50084.1| Tetratricopeptide TPR_2 repeat protein [Methylovorus glucosetrophus
           SIP3-4]
          Length = 927

 Score = 64.3 bits (155), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 53/195 (27%), Positives = 89/195 (45%), Gaps = 7/195 (3%)

Query: 149 AASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVAR 208
           A   + +A A   +A  + P+ A++YY  G  +   GQ E A  +  + I LNP +  A 
Sbjct: 85  AVRQYPQAIASYMQAIALKPDRAEAYYNLGVSHAALGQLEPATASYKEAIRLNPAYIKAY 144

Query: 209 AQRHFVVHKMIVPGDRERVEQSLKEFRNFVDTHSNVVEACTLFAQVLVDQEDFDGAEEYF 268
                V+       +     QSL +FR       +  EA    A     Q+ FD A  ++
Sbjct: 145 RNLGVVLEAQGKHTEATAAYQSLLKFR------PDDAEAHHQLAINFSTQKKFDEAIIHY 198

Query: 269 NRSIRVDPENASLYVHRAMLMLQARGNVDEAIKLIEKAISIDKSCMFAYETLGTIEVQRG 328
           +R+I ++PE    Y ++A + L     +++AI + + AI +       Y  LG I  ++ 
Sbjct: 199 SRAIEINPEFVDAYCNKA-IALGKLNKLEDAILMYKAAIELVPDEASIYNNLGNIFSRKR 257

Query: 329 RLEEAVKCFNKALPL 343
           + EEA+ CF  A+ L
Sbjct: 258 QFEEALSCFENAIRL 272



 Score = 58.5 bits (140), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 81/387 (20%), Positives = 160/387 (41%), Gaps = 44/387 (11%)

Query: 130 VDPKIKVNAHIKRAVVHLHAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEE 189
           ++P+  V+A+  +A+  L   +    A      A ++ P+ A  Y   G I+    Q+EE
Sbjct: 204 INPEF-VDAYCNKAIA-LGKLNKLEDAILMYKAAIELVPDEASIYNNLGNIFSRKRQFEE 261

Query: 190 ALRNLDKTIALNPNFHVARAQRHFVVHKMIVPGDRERVEQSLKEFRNFVDTHSNVVEACT 249
           AL   +  I L P +  A    H      ++  D ERVE+++  ++  ++ H +  EA  
Sbjct: 262 ALSCFENAIRLQPTYLKA----HCNAGNALI--DLERVEEAIHHYKKALEIHPDHAEAHN 315

Query: 250 LFAQVLVDQEDFDGAEEYFNRSIRVDPENASLYVHRAMLMLQARGNVDEAIKLIEKAISI 309
                      ++ A   + R+I + P  A    +   + L A   V+ AI L++++++I
Sbjct: 316 SLGIAYSKLSRYNEAIASYQRAIALMPNYAEAICNLG-ITLCATLEVEAAIPLLKQSLAI 374

Query: 310 DKSCMFAYETLGTIEVQRGRLEEAVKCFNKALPLARDEAELSHIYSLRDAAIAQMKVCER 369
               + A+  L       GR EEA   +  AL L+    +L +  +       Q  + + 
Sbjct: 375 YADNLIAHVHLAETYAVLGRFEEAAPHYEYALKLSEKNPQLINALANIYVKTGQHDLAKE 434

Query: 370 YNIKK-KVSPRSQNITKNEKLAIKQLRENNDIIIRPADKGGKTVVMDKADYTQKMTSILN 428
           Y  +  ++ PR  +   N    +  L  ++D I +  +   K++ + K D  +  +++ N
Sbjct: 435 YFERALEIDPRFTDALNN----LGNLHHSHDRISQAIECYLKSIAI-KPDSARAYSNLGN 489

Query: 429 SNDYEIIPGDPTKTIEESEKYGNLENESGQKHAASDFTKAFADLDEAEKVDPNVADSYYQ 488
           S                   Y +L+          D+ KA      A ++DP  +D+YY 
Sbjct: 490 S-------------------YSSLK----------DYEKAIDAYKTAIRLDPQYSDAYYN 520

Query: 489 RGQIYCLFGQYEEALRNLDKTIALNPN 515
            G       Q+ +A+ +  + + + P+
Sbjct: 521 LGTAQMEIKQFRDAIYSYKQVLEIEPD 547



 Score = 53.5 bits (127), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 80/395 (20%), Positives = 166/395 (42%), Gaps = 50/395 (12%)

Query: 140 IKRAVVHLHAASDFTKAFADLDEAEK----------VDPNVADSYYQRGQIYCLFGQYEE 189
           I+    +L A  +   A  DL+  E+          + P+ A+++   G  Y    +Y E
Sbjct: 270 IRLQPTYLKAHCNAGNALIDLERVEEAIHHYKKALEIHPDHAEAHNSLGIAYSKLSRYNE 329

Query: 190 ALRNLDKTIALNPNFHVARAQRHFVVHKMI-VPGDRERVEQSLKEFRNFVDTHSNVVEAC 248
           A+ +  + IAL PN+  A       +   + V      ++QSL  + + +  H ++ E  
Sbjct: 330 AIASYQRAIALMPNYAEAICNLGITLCATLEVEAAIPLLKQSLAIYADNLIAHVHLAETY 389

Query: 249 TLFAQVLVDQEDFDGAEEYFNRSIRVDPENASLYVHRAMLMLQARGNVDEAIKLIEKAIS 308
            +  +       F+ A  ++  ++++  +N  L    A + ++  G  D A +  E+A+ 
Sbjct: 390 AVLGR-------FEEAAPHYEYALKLSEKNPQLINALANIYVKT-GQHDLAKEYFERALE 441

Query: 309 IDKSCMFAYETLGTIEVQRGRLEEAVKCFNKALPL----ARDEAELSHIY-SLRDAAIAQ 363
           ID     A   LG +     R+ +A++C+ K++ +    AR  + L + Y SL+D     
Sbjct: 442 IDPRFTDALNNLGNLHHSHDRISQAIECYLKSIAIKPDSARAYSNLGNSYSSLKDYE--- 498

Query: 364 MKVCERYNIKKKVSPRSQNITKN---EKLAIKQLRENNDIIIRPADKGGKTVVMDKADYT 420
            K  + Y    ++ P+  +   N    ++ IKQ R+        A    K V+  + D  
Sbjct: 499 -KAIDAYKTAIRLDPQYSDAYYNLGTAQMEIKQFRD--------AIYSYKQVLEIEPDSV 549

Query: 421 QKMTSILNS----NDY----EIIPGDPTKTIEESEKYGNLENESGQKHAASDFTKAFADL 472
           + M ++  +    N++    EI     +      E YGN+ N     +   +  K +   
Sbjct: 550 KAMNNLGVAHTALNEFKQAEEIFSKVFSYETGHLEAYGNMGNVCCSNNQLEESIKWY--- 606

Query: 473 DEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLD 507
           ++A ++D    ++ +  G +Y   G +E+  ++ +
Sbjct: 607 EKALEIDAKNPETLWNLGLVYLRQGDFEQGWKHYE 641



 Score = 42.4 bits (98), Expect = 0.64,   Method: Compositional matrix adjust.
 Identities = 56/256 (21%), Positives = 111/256 (43%), Gaps = 14/256 (5%)

Query: 268 FNRSIRVDPENASLYVHRAMLMLQARGNVDEAIKLIEKAISIDKSCMFAYETLGTIEVQR 327
           + ++I + P+ A  Y +  +    A G ++ A    ++AI ++ + + AY  LG +   +
Sbjct: 96  YMQAIALKPDRAEAYYNLGVSH-AALGQLEPATASYKEAIRLNPAYIKAYRNLGVVLEAQ 154

Query: 328 GRLEEAVKCFNKALPLARDEAELSHIYSLRDAAIAQMKVCE---RYNIKKKVSPRSQNIT 384
           G+  EA   +   L    D+AE  H  ++  +   Q K  E    Y+   +++P   +  
Sbjct: 155 GKHTEATAAYQSLLKFRPDDAEAHHQLAINFS--TQKKFDEAIIHYSRAIEINPEFVDAY 212

Query: 385 KNEKLAIKQLRENNDIIIRPADKGGKTVVMDKADYTQKMTSILN-SNDYEIIPGDPTKTI 443
            N+ +A+ +L +  D I+    K    +V D+A     + +I +    +E         I
Sbjct: 213 CNKAIALGKLNKLEDAILM--YKAAIELVPDEASIYNNLGNIFSRKRQFEEALSCFENAI 270

Query: 444 EESEKYGNLENESGQKHAASDFTK---AFADLDEAEKVDPNVADSYYQRGQIYCLFGQYE 500
                Y  L+      +A  D  +   A     +A ++ P+ A+++   G  Y    +Y 
Sbjct: 271 RLQPTY--LKAHCNAGNALIDLERVEEAIHHYKKALEIHPDHAEAHNSLGIAYSKLSRYN 328

Query: 501 EALRNLDKTIALNPNF 516
           EA+ +  + IAL PN+
Sbjct: 329 EAIASYQRAIALMPNY 344


>gi|158336391|ref|YP_001517565.1| hypothetical protein AM1_3253 [Acaryochloris marina MBIC11017]
 gi|158306632|gb|ABW28249.1| TPR domain protein [Acaryochloris marina MBIC11017]
          Length = 237

 Score = 64.3 bits (155), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 48/218 (22%), Positives = 106/218 (48%), Gaps = 10/218 (4%)

Query: 147 LHAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHV 206
           L+    F +A    D+A +V+      +++RG      G+YEEA+ +LD  + + P+++ 
Sbjct: 10  LYDLGQFEEAVMTYDQALQVNHKDDAVWFRRGISLGNLGRYEEAIDSLDHALEIQPSWYE 69

Query: 207 ARAQRHFVVHKMIVPGDRERVEQSLKEFRNFVDTHSNVVEACTLFAQVLVDQEDFDGAEE 266
           A   R   +H   +  +RE    ++    + +    N + A  +   +L++   F+ A  
Sbjct: 70  AWYSRALYLH--CLGNNRE----AITSLHSALKIQPNYLLAWDMRGLILIESGRFEEALA 123

Query: 267 YFNRSIRVDPENASLYVHRAMLMLQARGNVDEAIKLIEKAISIDKSCMFAYETLGTIEVQ 326
            F+ ++ ++P++  +++++A   L   G   EA   +++A+ +       ++ LG + + 
Sbjct: 124 SFDHALDIEPDDVQIWINKAGTQL-LLGRKKEATHSLKQALEVTPENYPDWKMLGDMLLD 182

Query: 327 RGRLEEAVKCFNKALPLARDEAELSHIYSLRDAAIAQM 364
            G+ EEA+  F  AL +   + E   I+ LR  A+ ++
Sbjct: 183 LGQYEEAITSFEHALDIKPKDFE---IWFLRGIALRKL 217



 Score = 38.5 bits (88), Expect = 9.3,   Method: Compositional matrix adjust.
 Identities = 31/148 (20%), Positives = 66/148 (44%), Gaps = 12/148 (8%)

Query: 145 VHLHAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPN- 203
           ++LH   +  +A   L  A K+ PN   ++  RG I    G++EEAL + D  + + P+ 
Sbjct: 76  LYLHCLGNNREAITSLHSALKIQPNYLLAWDMRGLILIESGRFEEALASFDHALDIEPDD 135

Query: 204 --FHVARAQRHFVVHKMIVPGDRERVEQSLKEFRNFVDTHSNVVEACTLFAQVLVDQEDF 261
               + +A    ++      G ++    SLK+      T  N  +   +   +L+D   +
Sbjct: 136 VQIWINKAGTQLLL------GRKKEATHSLKQALEV--TPENYPD-WKMLGDMLLDLGQY 186

Query: 262 DGAEEYFNRSIRVDPENASLYVHRAMLM 289
           + A   F  ++ + P++  ++  R + +
Sbjct: 187 EEAITSFEHALDIKPKDFEIWFLRGIAL 214


>gi|449105205|ref|ZP_21741910.1| hypothetical protein HMPREF9729_00175 [Treponema denticola ASLM]
 gi|451969511|ref|ZP_21922740.1| hypothetical protein HMPREF9728_01940 [Treponema denticola US-Trep]
 gi|448967192|gb|EMB47833.1| hypothetical protein HMPREF9729_00175 [Treponema denticola ASLM]
 gi|451701608|gb|EMD56069.1| hypothetical protein HMPREF9728_01940 [Treponema denticola US-Trep]
          Length = 369

 Score = 64.3 bits (155), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 57/254 (22%), Positives = 113/254 (44%), Gaps = 16/254 (6%)

Query: 102 LLRATVYIFTSQSTKAIEDLTQLVEDTSVDPKIKVNAHIKRAVVHLHAASDFTKAFADLD 161
           LLR  ++    +  +AI D ++++E    DP+    A+  R+  +L    DF K   D++
Sbjct: 93  LLRGLIFYAMMKYNEAIVDFSRVIELIPNDPR----AYNNRSSCYLEFG-DFEKVLCDIN 147

Query: 162 EAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQRHFVVHKMIVP 221
            A K+DP  +  +  RG+I+     Y+ A+ N  + + LNP    A   R  + ++ I  
Sbjct: 148 SAIKLDPKDSLHFKNRGEIFYRLKDYDNAILNYTQALKLNPRDSDAYFSRG-LFYETIKD 206

Query: 222 GDRERVE--QSLKEFRNFVDTHSNVVEACTLFAQVLVDQEDFDGAEEYFNRSIRVDPENA 279
            +    +  ++LK      D + ++  +C          +++D A   FN+ I+++  +A
Sbjct: 207 YNSALSDYYKALKLKYRSNDIYFHIGLSCYAL-------KEYDNAINAFNKYIKINNTDA 259

Query: 280 SLYVHRAMLMLQARGNVDEAIKLIEKAISIDKSCMFAYETLGTIEVQRGRLEEAVKCFNK 339
             Y  R  +    + N D +IK ++ AI++  S    +         +  L EA+ C  +
Sbjct: 260 EAYTWRGSIYFILK-NYDNSIKDLDMAINLGGSNEVVFYNKAVALYSKNELNEAIDCLEE 318

Query: 340 ALPLARDEAELSHI 353
            + L  D  +   +
Sbjct: 319 GINLFPDYYDFYQV 332



 Score = 43.5 bits (101), Expect = 0.32,   Method: Compositional matrix adjust.
 Identities = 31/116 (26%), Positives = 47/116 (40%), Gaps = 10/116 (8%)

Query: 433 EIIPGDPTKTIEESEKYGNLENESGQKHAASDFTKAFADLDEAEKVDPNVADSYYQRGQI 492
           E+IP DP              N S       DF K   D++ A K+DP  +  +  RG+I
Sbjct: 117 ELIPNDPRAY----------NNRSSCYLEFGDFEKVLCDINSAIKLDPKDSLHFKNRGEI 166

Query: 493 YCLFGQYEEALRNLDKTIALNPNFHVARAQRHFVWTSTLAELMAFSDEFMIPKITY 548
           +     Y+ A+ N  + + LNP    A   R   + +      A SD +   K+ Y
Sbjct: 167 FYRLKDYDNAILNYTQALKLNPRDSDAYFSRGLFYETIKDYNSALSDYYKALKLKY 222



 Score = 39.7 bits (91), Expect = 4.0,   Method: Compositional matrix adjust.
 Identities = 41/194 (21%), Positives = 82/194 (42%), Gaps = 7/194 (3%)

Query: 156 AFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQRHFVV 215
           A  D++ + K++PN  +S   RG I+    +Y EA+ +  + I L PN   A   R    
Sbjct: 74  AIHDINRSLKINPNYEESILLRGLIFYAMMKYNEAIVDFSRVIELIPNDPRAYNNRSSCY 133

Query: 216 HKMIVPGDRERVEQSLKEFRNFVDTHSNVVEACTLFAQVLVDQEDFDGAEEYFNRSIRVD 275
            +    GD E+V   L +  + +              ++    +D+D A   + ++++++
Sbjct: 134 LEF---GDFEKV---LCDINSAIKLDPKDSLHFKNRGEIFYRLKDYDNAILNYTQALKLN 187

Query: 276 PENASLYVHRAMLMLQARGNVDEAIKLIEKAISIDKSCMFAYETLGTIEVQRGRLEEAVK 335
           P ++  Y  R  L  +   + + A+    KA+ +       Y  +G         + A+ 
Sbjct: 188 PRDSDAYFSRG-LFYETIKDYNSALSDYYKALKLKYRSNDIYFHIGLSCYALKEYDNAIN 246

Query: 336 CFNKALPLARDEAE 349
            FNK + +   +AE
Sbjct: 247 AFNKYIKINNTDAE 260



 Score = 39.3 bits (90), Expect = 5.7,   Method: Compositional matrix adjust.
 Identities = 40/175 (22%), Positives = 84/175 (48%), Gaps = 14/175 (8%)

Query: 167 DPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQRHFVVHKMIVPGDRER 226
           DPN    YY+RG  Y L G Y+ A+ ++++++ +NPN+  +   R  + + M+      +
Sbjct: 51  DPNNYKLYYERGYYYSLSGYYDLAIHDINRSLKINPNYEESILLRGLIFYAMM------K 104

Query: 227 VEQSLKEFRNFVDTHSNVVEACTLFAQVLVDQEDFDGAEEYFNRSIRVDPENASLYVHRA 286
             +++ +F   ++   N   A    +   ++  DF+      N +I++DP+++  + +R 
Sbjct: 105 YNEAIVDFSRVIELIPNDPRAYNNRSSCYLEFGDFEKVLCDINSAIKLDPKDSLHFKNRG 164

Query: 287 MLMLQARGNVDEAIKLIEKAISIDKSCMFAYETLGTIEVQRGRLEEAVKCFNKAL 341
            +  + + + D AI    +A+ ++     AY         RG   E +K +N AL
Sbjct: 165 EIFYRLK-DYDNAILNYTQALKLNPRDSDAY-------FSRGLFYETIKDYNSAL 211


>gi|182677748|ref|YP_001831894.1| hypothetical protein Bind_0755 [Beijerinckia indica subsp. indica
           ATCC 9039]
 gi|182633631|gb|ACB94405.1| Tetratricopeptide TPR_2 repeat protein [Beijerinckia indica subsp.
           indica ATCC 9039]
          Length = 662

 Score = 64.3 bits (155), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 69/257 (26%), Positives = 111/257 (43%), Gaps = 50/257 (19%)

Query: 112 SQSTKAIEDLTQLVEDT-SVDPKIKVNAH-----IKRAVVHLHAASDFTKAFADLDEAEK 165
           S    A++DL +  E   + D  +K  AH      +R V+ L       +A A LD A  
Sbjct: 105 SNKAIALQDLQRFEEALYASDHALKRGAHNPDLYYRRGVL-LRDLGRLDEAIAALDIALM 163

Query: 166 VDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQRHFVVHKMIVPGDRE 225
           + P+ A++ +  GQI    G +E+AL   DK ++L P F          +  +I   DR 
Sbjct: 164 LQPDHAEALHTGGQILQASGHFEDALAFYDKALSLKPRF----------IEALI---DRG 210

Query: 226 RVEQSLKEFRNFVDTHSNVVEACTLFAQVLVDQEDFDGAEEYFNRSIRVDPENASLYVHR 285
            + Q++K+F                           D A   +N +  + P+NA L  +R
Sbjct: 211 ALLQTVKQF---------------------------DAALTCYNAAHALQPDNAELLNNR 243

Query: 286 AMLMLQARGNVDEAIKLIEKAISIDKSCMFAYETLGTIEVQRGRLEEAVKCFNKALPL-- 343
               LQ  G   EA+  +E+AI++  +   A+   G + +Q    E+A+ CF +AL L  
Sbjct: 244 GT-ALQCFGRFSEALTDLERAIALRPNFAQAWFNKGNVHIQSREPEQALACFKRALELRP 302

Query: 344 ARDEAELSHIYSLRDAA 360
           A  EA  S   +L+ A 
Sbjct: 303 AYGEAMSSQAVALQHAG 319



 Score = 49.3 bits (116), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 54/219 (24%), Positives = 99/219 (45%), Gaps = 12/219 (5%)

Query: 134 IKVNAHIKRAVVHLHAASDF--TKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEAL 191
           I+V+ +I RA+  L+A       +   +LD+    DP   +     G I    G  EEAL
Sbjct: 31  IQVDHNINRAITFLNAGQPHAAVEQLQNLDQKLVNDPIRCNLI---GLIRLAAGAKEEAL 87

Query: 192 RNLDKTIALNPNFHVARAQRHFVVHKMIVPGDRERVEQSLKEFRNFVDTHSNVVEACTLF 251
              ++ + L+P F  A +      +K I   D +R E++L    + +   ++  +     
Sbjct: 88  DWFERALVLDPGFTGAWS------NKAIALQDLQRFEEALYASDHALKRGAHNPDLYYRR 141

Query: 252 AQVLVDQEDFDGAEEYFNRSIRVDPENASLYVHRAMLMLQARGNVDEAIKLIEKAISIDK 311
             +L D    D A    + ++ + P++A   +H    +LQA G+ ++A+   +KA+S+  
Sbjct: 142 GVLLRDLGRLDEAIAALDIALMLQPDHAE-ALHTGGQILQASGHFEDALAFYDKALSLKP 200

Query: 312 SCMFAYETLGTIEVQRGRLEEAVKCFNKALPLARDEAEL 350
             + A    G +     + + A+ C+N A  L  D AEL
Sbjct: 201 RFIEALIDRGALLQTVKQFDAALTCYNAAHALQPDNAEL 239



 Score = 47.0 bits (110), Expect = 0.025,   Method: Compositional matrix adjust.
 Identities = 43/148 (29%), Positives = 66/148 (44%), Gaps = 8/148 (5%)

Query: 129 SVDPKIKVNAHIKRAVVHLHAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYE 188
           S+ P+  + A I R  + L     F  A    + A  + P+ A+    RG     FG++ 
Sbjct: 197 SLKPRF-IEALIDRGAL-LQTVKQFDAALTCYNAAHALQPDNAELLNNRGTALQCFGRFS 254

Query: 189 EALRNLDKTIALNPNFHVARAQRHFVVHKMIVPGDRERVEQSLKEFRNFVDTHSNVVEAC 248
           EAL +L++ IAL PNF    AQ  F  +K  V       EQ+L  F+  ++      EA 
Sbjct: 255 EALTDLERAIALRPNF----AQAWF--NKGNVHIQSREPEQALACFKRALELRPAYGEAM 308

Query: 249 TLFAQVLVDQEDFDGAEEYFNRSIRVDP 276
           +  A  L     FD A   ++ ++  DP
Sbjct: 309 SSQAVALQHAGRFDEALAAYDATLAFDP 336


>gi|378827499|ref|YP_005190231.1| putative O-linked GlcNAc transferase [Sinorhizobium fredii HH103]
 gi|365180551|emb|CCE97406.1| putative O-linked GlcNAc transferase [Sinorhizobium fredii HH103]
          Length = 295

 Score = 64.3 bits (155), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 62/234 (26%), Positives = 100/234 (42%), Gaps = 12/234 (5%)

Query: 157 FADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQRHFVVH 216
            A L      +P+  ++Y  RG  Y   G++  AL + D+ I LNP+F+ A A R  V  
Sbjct: 65  IASLSSVIASNPSDPEAYNVRGSAYGRAGEFRRALADFDQAIKLNPSFYQAYANRGLVHR 124

Query: 217 KMIVPGDRERVEQSLKEFRNFVDTHSNVVEACTLFAQVLVDQEDFDGAEEYFNRSIRVDP 276
            M   GD++    +L ++   +  +S+   A      +       D A   FN+++++D 
Sbjct: 125 NM---GDQQ---AALADYNAALQLNSSYDVAYIGRGNLYRQANQLDAAFNDFNKAVQLDT 178

Query: 277 ENASLYVHRAMLMLQARGNVDEAIKLIEKAISIDKSCMFAYETLGTIEVQRGRLEEAVKC 336
            +   Y +R  L+ QAR +   AI+    AIS+  S    Y   G   V +G  + A   
Sbjct: 179 TDPRAYHNRG-LIYQARNDHAHAIEDFSTAISLSPSSAEPYNGRGISYVAQGDDDNAFSD 237

Query: 337 FNKAL----PLARDEAELSHIYSLR-DAAIAQMKVCERYNIKKKVSPRSQNITK 385
           FN A+     LA   A  + IY  R + A AQ        +  K  P    + +
Sbjct: 238 FNTAINLNGKLAESWANQALIYERRGEKAKAQKSYSHALQLDPKYEPARAGLAR 291



 Score = 55.5 bits (132), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 57/250 (22%), Positives = 111/250 (44%), Gaps = 18/250 (7%)

Query: 94  NHTKALARLLRATVYIFTSQSTKAIEDLTQLVEDTSVDPKIKVNAHIKRAVVHLHAASDF 153
           N ++++ R+ RA        S + I  L+ ++     DP+    A+  R   +  A  +F
Sbjct: 47  NASESMIRVERA------QGSEENIASLSSVIASNPSDPE----AYNVRGSAYGRAG-EF 95

Query: 154 TKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQRHF 213
            +A AD D+A K++P+   +Y  RG ++   G  + AL + +  + LN ++ VA   R  
Sbjct: 96  RRALADFDQAIKLNPSFYQAYANRGLVHRNMGDQQAALADYNAALQLNSSYDVAYIGRGN 155

Query: 214 VVHKMIVPGDRERVEQSLKEFRNFVDTHSNVVEACTLFAQVLVDQEDFDGAEEYFNRSIR 273
           +  +        +++ +  +F   V   +    A      +   + D   A E F+ +I 
Sbjct: 156 LYRQA------NQLDAAFNDFNKAVQLDTTDPRAYHNRGLIYQARNDHAHAIEDFSTAIS 209

Query: 274 VDPENASLYVHRAMLMLQARGNVDEAIKLIEKAISIDKSCMFAYETLGTIEVQRGRLEEA 333
           + P +A  Y  R +  + A+G+ D A      AI+++     ++     I  +RG   +A
Sbjct: 210 LSPSSAEPYNGRGISYV-AQGDDDNAFSDFNTAINLNGKLAESWANQALIYERRGEKAKA 268

Query: 334 VKCFNKALPL 343
            K ++ AL L
Sbjct: 269 QKSYSHALQL 278



 Score = 43.9 bits (102), Expect = 0.24,   Method: Compositional matrix adjust.
 Identities = 31/117 (26%), Positives = 53/117 (45%), Gaps = 15/117 (12%)

Query: 423 MTSILNSNDYEIIPGDPTKTIEESEKYGNLENESGQKHAASDFTKAFADLDEAEKVDPNV 482
           ++S++ SN     P DP         YG           A +F +A AD D+A K++P+ 
Sbjct: 68  LSSVIASN-----PSDPEAYNVRGSAYGR----------AGEFRRALADFDQAIKLNPSF 112

Query: 483 ADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQRHFVWTSTLAELMAFSD 539
             +Y  RG ++   G  + AL + +  + LN ++ VA   R  ++        AF+D
Sbjct: 113 YQAYANRGLVHRNMGDQQAALADYNAALQLNSSYDVAYIGRGNLYRQANQLDAAFND 169



 Score = 39.7 bits (91), Expect = 3.9,   Method: Compositional matrix adjust.
 Identities = 22/71 (30%), Positives = 35/71 (49%)

Query: 469 FADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQRHFVWT 528
            A L      +P+  ++Y  RG  Y   G++  AL + D+ I LNP+F+ A A R  V  
Sbjct: 65  IASLSSVIASNPSDPEAYNVRGSAYGRAGEFRRALADFDQAIKLNPSFYQAYANRGLVHR 124

Query: 529 STLAELMAFSD 539
           +   +  A +D
Sbjct: 125 NMGDQQAALAD 135


>gi|425449701|ref|ZP_18829537.1| Tetratricopeptide repeat protein (fragment) [Microcystis aeruginosa
           PCC 7941]
 gi|389769861|emb|CCI05465.1| Tetratricopeptide repeat protein (fragment) [Microcystis aeruginosa
           PCC 7941]
          Length = 957

 Score = 64.3 bits (155), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 85/389 (21%), Positives = 177/389 (45%), Gaps = 39/389 (10%)

Query: 168 PNV---ADSYYQRG-QIYCLFGQYEEALRNLDKTIALN--PNFHVARAQRHFVV-----H 216
           PN    AD + QRG Q++ LF ++EEA++  D+ I  N   N ++A   +   +     H
Sbjct: 538 PNTNAKADIWIQRGGQLWRLF-RFEEAIKAFDEAIKQNDHENVYLAWYGKGLALFELREH 596

Query: 217 KMIVPGDRERVEQSLKEFRNFVDTHSNVVEACTLFAQVLVD-----------QEDFDGAE 265
           +  +   ++ +  +L +  +    HS++++  ++    L D           +E+++ A 
Sbjct: 597 QPAIEALQQAI-NTLPKREDLKKFHSSILQRQSVVYSFLGDFSTSAGREREARENYEQAL 655

Query: 266 EYFNRSIRVDPENASLYVHRAMLMLQARGNVDEAIKLIEKAISIDKSCMFAYETLGTIEV 325
              N++I + P N + Y  ++ ++ + +   DE +  I +AI +    ++ Y   G +  
Sbjct: 656 TVINQAISLVPNNPNHYNEKSSVLSRLK-RYDEGLAAITQAIELAPRAVW-YGNRGNLYR 713

Query: 326 QRGRLEEAVKCFNKALPLARDEAELSHIYSLRDAAIAQMKVCERYNIKKKVSPRSQNITK 385
            + + + A+  +NKA+ L  + A     Y  R    +  K   +Y++      ++ +I  
Sbjct: 714 DQQKYKLALDDYNKAIELNPNHA---GAYYNRGLLYSDQK---KYDLALSDYDKAIDINP 767

Query: 386 N------EKLAIKQLRENNDIIIRPADKGGKTVVMDKADYTQKMTSILNSNDYEIIPGDP 439
           N       +  + +L+E  ++ +   DK  +    D   Y  +     N   Y++   D 
Sbjct: 768 NYAEAYVNRGVLYRLQEKYELALADYDKAIELNPNDAVAYYNRGNLYKNLQKYDLALSDY 827

Query: 440 TKTIEESEKYGNLENESGQKHAASD-FTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQ 498
           +K I+ +  Y    N  G  +   + +  A AD D+A  ++ ++A++Y+ RG +Y    +
Sbjct: 828 SKAIDINPNYAEAYNNRGVLYRLQEKYELALADYDKAIDINHDLAEAYFGRGILYYHQKK 887

Query: 499 YEEALRNLDKTIALNPNFHVARAQRHFVW 527
           YE AL +L + I +NPN   A   R  ++
Sbjct: 888 YELALADLTQVIDINPNLAQAYLGRGVLY 916



 Score = 62.4 bits (150), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 72/291 (24%), Positives = 137/291 (47%), Gaps = 28/291 (9%)

Query: 64  LLSKAKRAFEHEDYLTAIRHCTEEIESTSSNHTKALARLLRATVYIFTSQSTKAIEDLTQ 123
           +LS+ KR   +++ L AI   T+ IE       +A+    R  +Y    +   A++D  +
Sbjct: 678 VLSRLKR---YDEGLAAI---TQAIELAP----RAVWYGNRGNLYRDQQKYKLALDDYNK 727

Query: 124 LVEDTSVDPKIKVNAHIKRAVVHLHAASDFTK---AFADLDEAEKVDPNVADSYYQRGQI 180
            +E   ++P     A+  R +++    SD  K   A +D D+A  ++PN A++Y  RG +
Sbjct: 728 AIE---LNPN-HAGAYYNRGLLY----SDQKKYDLALSDYDKAIDINPNYAEAYVNRGVL 779

Query: 181 YCLFGQYEEALRNLDKTIALNPNFHVARAQRHFVVHKMIVPGDRERVEQSLKEFRNFVDT 240
           Y L  +YE AL + DK I LNPN  VA   R  +   +      ++ + +L ++   +D 
Sbjct: 780 YRLQEKYELALADYDKAIELNPNDAVAYYNRGNLYKNL------QKYDLALSDYSKAIDI 833

Query: 241 HSNVVEACTLFAQVLVDQEDFDGAEEYFNRSIRVDPENASLYVHRAMLMLQARGNVDEAI 300
           + N  EA      +   QE ++ A   ++++I ++ + A  Y  R +L    +   + A+
Sbjct: 834 NPNYAEAYNNRGVLYRLQEKYELALADYDKAIDINHDLAEAYFGRGILYYHQK-KYELAL 892

Query: 301 KLIEKAISIDKSCMFAYETLGTIEVQRGRLEEAVKCFNKALPLARDEAELS 351
             + + I I+ +   AY   G +  +  + E+A     +A  L R +  ++
Sbjct: 893 ADLTQVIDINPNLAQAYLGRGVLYAELKQTEKAKIDLQQAAILFRQQNNMA 943



 Score = 51.2 bits (121), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 29/72 (40%), Positives = 42/72 (58%)

Query: 468 AFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQRHFVW 527
           A +D D+A  ++PN A++Y  RG +Y L  +YE AL + DK I LNPN  VA   R  ++
Sbjct: 755 ALSDYDKAIDINPNYAEAYVNRGVLYRLQEKYELALADYDKAIELNPNDAVAYYNRGNLY 814

Query: 528 TSTLAELMAFSD 539
            +     +A SD
Sbjct: 815 KNLQKYDLALSD 826


>gi|425449711|ref|ZP_18829547.1| Tetratricopeptide repeat protein (fragment) [Microcystis aeruginosa
           PCC 7941]
 gi|389769840|emb|CCI05475.1| Tetratricopeptide repeat protein (fragment) [Microcystis aeruginosa
           PCC 7941]
          Length = 897

 Score = 64.3 bits (155), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 92/387 (23%), Positives = 155/387 (40%), Gaps = 51/387 (13%)

Query: 135 KVNAHIKRAVVHLHAASDFTKAFADLDEAEKV-DP-NVADSYYQRGQIYCLFGQYEEALR 192
           K +  I+R       A D  +A    DEA K  DP NV  ++Y +G      G+Y+ A+ 
Sbjct: 531 KADIWIQRGGQLWRLARD-QEAIKAFDEAIKQNDPDNVYLAWYGKGLALGYLGKYQTAIE 589

Query: 193 NLDKTIALNP------NFHVARAQRHFVVHKMIVPGDRERVEQSLKEFRNFVDTHSNVVE 246
              + I   P      NFH +  Q+  VV++ +     E  EQ+L      +    N   
Sbjct: 590 AFQQAINTLPKREDLKNFHSSILQQQSVVYRYL-----ENYEQALTVINQAISLVPNNPN 644

Query: 247 ACTLFAQVLVDQEDFDGAEEYFNRSIRVDPENASLYVHRAMLMLQARGNVDEAIKLIEKA 306
                  VL + + +D       ++I + P  A+ Y +R +L    +     A+    KA
Sbjct: 645 HYNEKWSVLSELKRYDEGLAAITQAINLAPR-AAWYYNRGILYYNQQ-KYKLALADFNKA 702

Query: 307 ISIDKSCMFAYETLGTIEVQRGRLEEAVKCFNKALPLARDEAELSHIYSLRDAAIAQMKV 366
           I ++++   AYE  G +  ++ + E A+  +NKA+ L R+ AE    Y  R A    +  
Sbjct: 703 IDLNRNFAKAYENRGNLYRRQQKYELALADYNKAIELNRNYAE---AYVNRGALYYDLG- 758

Query: 367 CERYNIKKKVSPRSQNITKNEKLAIKQLRENNDIIIRPADKGGKTVVMDKADYTQKMTSI 426
             +Y +      ++  I +N  +A                            Y  +    
Sbjct: 759 --KYELALADFSKAIEINRNYAMA----------------------------YNNRGLLY 788

Query: 427 LNSNDYEIIPGDPTKTIEESEKYGNLENESGQKH-AASDFTKAFADLDEAEKVDPNVADS 485
            +   Y++   D  K IE   K     N  G  + A   +  A AD +EA K++PN A++
Sbjct: 789 QDQKKYQLALADYNKAIELDSKLALAYNNRGNLYFAQQKYKLALADYEEAIKINPNFAEA 848

Query: 486 YYQRGQIYCLFGQYEEALRNLDKTIAL 512
           Y  RG +Y    Q ++A  +L +   L
Sbjct: 849 YANRGLLYAELKQTKKAKIDLQQAAIL 875



 Score = 58.5 bits (140), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 41/164 (25%), Positives = 80/164 (48%), Gaps = 7/164 (4%)

Query: 156 AFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQRHFVV 215
           A AD ++A +++ N A++Y  RG +Y   G+YE AL +  K I +N N+ +A   R  + 
Sbjct: 729 ALADYNKAIELNRNYAEAYVNRGALYYDLGKYELALADFSKAIEINRNYAMAYNNRGLLY 788

Query: 216 HKMIVPGDRERVEQSLKEFRNFVDTHSNVVEACTLFAQVLVDQEDFDGAEEYFNRSIRVD 275
                  D+++ + +L ++   ++  S +  A      +   Q+ +  A   +  +I+++
Sbjct: 789 Q------DQKKYQLALADYNKAIELDSKLALAYNNRGNLYFAQQKYKLALADYEEAIKIN 842

Query: 276 PENASLYVHRAMLMLQARGNVDEAIKLIEKAISI-DKSCMFAYE 318
           P  A  Y +R +L  + +      I L + AI    ++ M AYE
Sbjct: 843 PNFAEAYANRGLLYAELKQTKKAKIDLQQAAILFRQQNNMAAYE 886



 Score = 55.5 bits (132), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 79/377 (20%), Positives = 154/377 (40%), Gaps = 63/377 (16%)

Query: 168 PNV---ADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQRHFVVHKMIVPGDR 224
           PN    AD + QRG       + +EA++  D+ I  N   +V  A       K +  G  
Sbjct: 526 PNTNAKADIWIQRGGQLWRLARDQEAIKAFDEAIKQNDPDNVYLAW----YGKGLALGYL 581

Query: 225 ERVEQSLKEFRNFVDT----------HSNVVEACTLFAQVLVDQEDFDGAEEYFNRSIRV 274
            + + +++ F+  ++T          HS++++  ++  + L   E+++ A    N++I +
Sbjct: 582 GKYQTAIEAFQQAINTLPKREDLKNFHSSILQQQSVVYRYL---ENYEQALTVINQAISL 638

Query: 275 DPENASLYVHRAMLMLQARGNVDEAIKLIEKAISIDKSCMFAYETLGTIEVQRGRLEEAV 334
            P N + Y  +  ++ + +   DE +  I +AI++     + Y   G +   + + + A+
Sbjct: 639 VPNNPNHYNEKWSVLSELK-RYDEGLAAITQAINLAPRAAWYYNR-GILYYNQQKYKLAL 696

Query: 335 KCFNKALPLARDEAELSHIYSLRDAAIAQMKVCERYNIKKKVSPRSQNITKNEKLAIKQL 394
             FNKA+ L R                         N  K    R     + +K  +   
Sbjct: 697 ADFNKAIDLNR-------------------------NFAKAYENRGNLYRRQQKYELALA 731

Query: 395 RENNDIIIRPADKGGKTVVMDK---ADYTQKMTSILNSNDYEIIPGDPTKTIEESEKYGN 451
             N            K + +++     Y  +     +   YE+   D +K IE +  Y  
Sbjct: 732 DYN------------KAIELNRNYAEAYVNRGALYYDLGKYELALADFSKAIEINRNYAM 779

Query: 452 LENESGQKHA-ASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTI 510
             N  G  +     +  A AD ++A ++D  +A +Y  RG +Y    +Y+ AL + ++ I
Sbjct: 780 AYNNRGLLYQDQKKYQLALADYNKAIELDSKLALAYNNRGNLYFAQQKYKLALADYEEAI 839

Query: 511 ALNPNFHVARAQRHFVW 527
            +NPNF  A A R  ++
Sbjct: 840 KINPNFAEAYANRGLLY 856



 Score = 52.8 bits (125), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 54/233 (23%), Positives = 106/233 (45%), Gaps = 10/233 (4%)

Query: 119 EDLTQLVEDTSVDPKIKVNAHIKRAVVHLHAASDFTKAFADLDEAEKVDPNVADSYYQRG 178
           E L  + +  ++ P+     +  R +++ +    +  A AD ++A  ++ N A +Y  RG
Sbjct: 661 EGLAAITQAINLAPR--AAWYYNRGILY-YNQQKYKLALADFNKAIDLNRNFAKAYENRG 717

Query: 179 QIYCLFGQYEEALRNLDKTIALNPNFHVARAQRHFVVHKMIVPGDRERVEQSLKEFRNFV 238
            +Y    +YE AL + +K I LN N+  A   R  + +      D  + E +L +F   +
Sbjct: 718 NLYRRQQKYELALADYNKAIELNRNYAEAYVNRGALYY------DLGKYELALADFSKAI 771

Query: 239 DTHSNVVEACTLFAQVLVDQEDFDGAEEYFNRSIRVDPENASLYVHRAMLMLQARGNVDE 298
           + + N   A      +  DQ+ +  A   +N++I +D + A  Y +R  L   A+     
Sbjct: 772 EINRNYAMAYNNRGLLYQDQKKYQLALADYNKAIELDSKLALAYNNRGNLYF-AQQKYKL 830

Query: 299 AIKLIEKAISIDKSCMFAYETLGTIEVQRGRLEEAVKCFNKALPLARDEAELS 351
           A+   E+AI I+ +   AY   G +  +  + ++A     +A  L R +  ++
Sbjct: 831 ALADYEEAIKINPNFAEAYANRGLLYAELKQTKKAKIDLQQAAILFRQQNNMA 883



 Score = 48.9 bits (115), Expect = 0.008,   Method: Compositional matrix adjust.
 Identities = 65/281 (23%), Positives = 120/281 (42%), Gaps = 32/281 (11%)

Query: 279 ASLYVHRA-MLMLQARGNVDEAIKLIEKAISIDK--SCMFAYETLGTIEVQRGRLEEAVK 335
           A +++ R   L   AR    EAIK  ++AI  +   +   A+   G      G+ + A++
Sbjct: 532 ADIWIQRGGQLWRLARD--QEAIKAFDEAIKQNDPDNVYLAWYGKGLALGYLGKYQTAIE 589

Query: 336 CFNKALPLARDEAELSHIYSLRDAAIAQMKVCERY--NIKKKVSPRSQNIT--------K 385
            F +A+       +L + +S   + + Q  V  RY  N ++ ++  +Q I+         
Sbjct: 590 AFQQAINTLPKREDLKNFHS---SILQQQSVVYRYLENYEQALTVINQAISLVPNNPNHY 646

Query: 386 NEKLAIKQLRENNDIIIRPADKGGKTVVMD------KADYTQKMTSILNSNDYEIIPGDP 439
           NEK ++  L E     ++  D+G   +          A Y  +     N   Y++   D 
Sbjct: 647 NEKWSV--LSE-----LKRYDEGLAAITQAINLAPRAAWYYNRGILYYNQQKYKLALADF 699

Query: 440 TKTIEESEKYGN-LENESGQKHAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQ 498
            K I+ +  +    EN          +  A AD ++A +++ N A++Y  RG +Y   G+
Sbjct: 700 NKAIDLNRNFAKAYENRGNLYRRQQKYELALADYNKAIELNRNYAEAYVNRGALYYDLGK 759

Query: 499 YEEALRNLDKTIALNPNFHVARAQRHFVWTSTLAELMAFSD 539
           YE AL +  K I +N N+ +A   R  ++       +A +D
Sbjct: 760 YELALADFSKAIEINRNYAMAYNNRGLLYQDQKKYQLALAD 800


>gi|40063716|gb|AAR38497.1| TPR repeat protein [uncultured marine bacterium 583]
          Length = 733

 Score = 64.3 bits (155), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 49/222 (22%), Positives = 105/222 (47%), Gaps = 12/222 (5%)

Query: 128 TSVDPKIKVNAHIKRAVVHLHAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQY 187
           T   P+ ++N+     ++ L+++    +A   +    K  PN    Y   G  Y   G+ 
Sbjct: 3   TVSPPQTEINS-----LIALYSSGQIQEALDSVGALIKEYPNDPLLYNLSGICYKTIGEL 57

Query: 188 EEALRNLDKTIALNPNFHVARAQRHFVVHKMIVPGDRERVEQSLKEFRNFVDTHSNVVEA 247
           +EA+++ +K +A+ P++    A+ H+ +   +   D  +++ ++K +   +    +   A
Sbjct: 58  DEAVKSFEKALAIKPDY----AEVHYNLGLTL--QDLGQLDAAVKSYEKAIAIKPDYANA 111

Query: 248 CTLFAQVLVDQEDFDGAEEYFNRSIRVDPENASLYVHRAMLMLQARGNVDEAIKLIEKAI 307
           C      L D    D A + + ++I + P+ +    +   + L+  G +D A++  +KA+
Sbjct: 112 CNNLGVTLQDLGQLDAAVKSYEKAIAIKPDFSDAN-NNLGIALKNLGQLDAAVECYKKAL 170

Query: 308 SIDKSCMFAYETLGTIEVQRGRLEEAVKCFNKALPLARDEAE 349
           +I      A+  LG      G+L+ AV+C+ KAL +  D A+
Sbjct: 171 AIKPDYAEAHYNLGNALKNLGQLDAAVECYKKALAIKPDYAD 212



 Score = 63.2 bits (152), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 51/205 (24%), Positives = 95/205 (46%), Gaps = 14/205 (6%)

Query: 155 KAFADLDEAEK-------VDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVA 207
           K   +LDEA K       + P+ A+ +Y  G      GQ + A+++ +K IA+ P++  A
Sbjct: 52  KTIGELDEAVKSFEKALAIKPDYAEVHYNLGLTLQDLGQLDAAVKSYEKAIAIKPDY--A 109

Query: 208 RAQRHFVVHKMIVPGDRERVEQSLKEFRNFVDTHSNVVEACTLFAQVLVDQEDFDGAEEY 267
            A  +  V       D  +++ ++K +   +    +  +A       L +    D A E 
Sbjct: 110 NACNNLGVTLQ----DLGQLDAAVKSYEKAIAIKPDFSDANNNLGIALKNLGQLDAAVEC 165

Query: 268 FNRSIRVDPENASLYVHRAMLMLQARGNVDEAIKLIEKAISIDKSCMFAYETLGTIEVQR 327
           + +++ + P+ A  + +     L+  G +D A++  +KA++I      A   LG      
Sbjct: 166 YKKALAIKPDYAEAHYNLGN-ALKNLGQLDAAVECYKKALAIKPDYADACNNLGNALKNL 224

Query: 328 GRLEEAVKCFNKALPLARDEAELSH 352
           G+L+ AVKC+ KA+ +  D AE  H
Sbjct: 225 GQLDAAVKCYEKAVAIKPDYAEAYH 249



 Score = 52.0 bits (123), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 60/258 (23%), Positives = 107/258 (41%), Gaps = 36/258 (13%)

Query: 260 DFDGAEEYFNRSIRVDPENASLYVHRAMLMLQARGNVDEAIKLIEKAISIDKSCMFAYET 319
           + D A + F +++ + P+ A ++ +   L LQ  G +D A+K  EKAI+I      A   
Sbjct: 56  ELDEAVKSFEKALAIKPDYAEVHYNLG-LTLQDLGQLDAAVKSYEKAIAIKPDYANACNN 114

Query: 320 LGTIEVQRGRLEEAVKCFNKALPLARDEAELSHIYSLRDAAIAQM-KVCERYNIKKKVSP 378
           LG      G+L+ AVK + KA+ +  D ++ ++   +    + Q+    E Y     + P
Sbjct: 115 LGVTLQDLGQLDAAVKSYEKAIAIKPDFSDANNNLGIALKNLGQLDAAVECYKKALAIKP 174

Query: 379 RSQNITKNEKLAIKQLRENNDIIIRPADKGGKTVVMDKADYTQKMTSILNSNDYEIIPGD 438
                  N   A+K L +     +  A +  K  +  K DY     ++            
Sbjct: 175 DYAEAHYNLGNALKNLGQ-----LDAAVECYKKALAIKPDYADACNNL------------ 217

Query: 439 PTKTIEESEKYGNLENESGQKHAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQ 498
                      GN     GQ  AA    K +   ++A  + P+ A++Y+  G +     +
Sbjct: 218 -----------GNALKNLGQLDAA---VKCY---EKAVAIKPDYAEAYHNNGSVMRRLKR 260

Query: 499 YEEALRNLDKTIALNPNF 516
            +EAL + +  IA+ PN 
Sbjct: 261 QDEALASYESAIAIKPNL 278



 Score = 49.7 bits (117), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 47/234 (20%), Positives = 104/234 (44%), Gaps = 12/234 (5%)

Query: 156 AFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQRHFVV 215
           A    ++A  + P+ A++    G      GQ + A+++ +K IA+ P+F  A       +
Sbjct: 94  AVKSYEKAIAIKPDYANACNNLGVTLQDLGQLDAAVKSYEKAIAIKPDFSDANNNLGIAL 153

Query: 216 HKMIVPGDRERVEQSLKEFRNFVDTHSNVVEACTLFAQVLVDQEDFDGAEEYFNRSIRVD 275
             +       +++ +++ ++  +    +  EA       L +    D A E + +++ + 
Sbjct: 154 KNL------GQLDAAVECYKKALAIKPDYAEAHYNLGNALKNLGQLDAAVECYKKALAIK 207

Query: 276 PENASLYVHRAMLMLQARGNVDEAIKLIEKAISIDKSCMFAYETLGTIEVQRGRLEEAVK 335
           P+ A    +     L+  G +D A+K  EKA++I      AY   G++  +  R +EA+ 
Sbjct: 208 PDYADA-CNNLGNALKNLGQLDAAVKCYEKAVAIKPDYAEAYHNNGSVMRRLKRQDEALA 266

Query: 336 CFNKALPLARDEAELSHIYSLRDAAIAQMKVCERYNIKKKVSPRSQNITKNEKL 389
            +  A+ +   +  L  I  L D    +M +C   ++  +++  ++ I   EK+
Sbjct: 267 SYESAIAI---KPNLDFI--LGDLLSTKMSLCIWDDLAHRINELTKKINNGEKV 315



 Score = 38.5 bits (88), Expect = 9.4,   Method: Compositional matrix adjust.
 Identities = 50/233 (21%), Positives = 91/233 (39%), Gaps = 37/233 (15%)

Query: 286 AMLMLQARGNVDEAIKLIEKAISIDKSCMFAYETLGTIEVQRGRLEEAVKCFNKALPLAR 345
           +++ L + G + EA+  +   I    +    Y   G      G L+EAVK F KAL +  
Sbjct: 13  SLIALYSSGQIQEALDSVGALIKEYPNDPLLYNLSGICYKTIGELDEAVKSFEKALAIKP 72

Query: 346 DEAELSHIYSLRDAAIAQM-KVCERYNIKKKVSPRSQNITKNEKLAIKQLRENNDIIIRP 404
           D AE+ +   L    + Q+    + Y     + P   N   N  + ++ L +     +  
Sbjct: 73  DYAEVHYNLGLTLQDLGQLDAAVKSYEKAIAIKPDYANACNNLGVTLQDLGQ-----LDA 127

Query: 405 ADKGGKTVVMDKADYTQKMTSILNSNDYEIIPGDPTKTIEESEKYGNLENESGQKHAASD 464
           A K  +  +  K D++    ++          G   K +             GQ  AA +
Sbjct: 128 AVKSYEKAIAIKPDFSDANNNL----------GIALKNL-------------GQLDAAVE 164

Query: 465 -FTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNF 516
            + KA A       + P+ A+++Y  G      GQ + A+    K +A+ P++
Sbjct: 165 CYKKALA-------IKPDYAEAHYNLGNALKNLGQLDAAVECYKKALAIKPDY 210


>gi|365892707|ref|ZP_09430962.1| exported hypothetical protein [Bradyrhizobium sp. STM 3809]
 gi|365331204|emb|CCE03493.1| exported hypothetical protein [Bradyrhizobium sp. STM 3809]
          Length = 417

 Score = 63.9 bits (154), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 62/253 (24%), Positives = 117/253 (46%), Gaps = 15/253 (5%)

Query: 96  TKALARLLRATVYIFTSQSTKAIEDLTQLVEDTSVDPKIKVNAHIKRAVVH-LHAASDFT 154
           +  L RLLR   Y    Q   A+ D   L+E    +P   V A ++RA ++ L   +D  
Sbjct: 61  SNGLIRLLRGEAYALNGQLDLAMADFDWLIER---EPD-HVAARLRRASIYRLKRNTD-- 114

Query: 155 KAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQRHFV 214
            A AD D+    DP   D+Y  R  ++     ++ A+ +  + + ++P    A   R   
Sbjct: 115 AAIADYDKVIATDPKNVDAYDGRAALHFARRDFDGAVADYGRILVVHPENLKAYVGRSCA 174

Query: 215 VHKMIVPGDRERVEQSLKEFRNFVDTHSNVVEACTLFAQVLVDQEDFDGAEEYFNRSIRV 274
              M        ++++L +    ++      +      +  + + D D A   F+R+I +
Sbjct: 175 YRGM------RDLDRALTDCAKAIEIAPKRDDGYICRGETQLYRNDLDRAAADFDRAIEL 228

Query: 275 DPENASLYVHRAMLMLQARGNVDEAIKLIEKAISIDKSCMFAYETLGTIEVQRGRLEEAV 334
           +P +AS +   A++    RGN++ AI  +++AI  D +    Y + G ++++  R++EA 
Sbjct: 229 NPRSASSFAGLAVVH-HRRGNLEAAIHDLDQAIGFDSNNPGLYRSRGFLQLETERVKEAA 287

Query: 335 KCFNKAL-PLARD 346
           + F K+L P  RD
Sbjct: 288 EDFIKSLEPNPRD 300


>gi|72382932|ref|YP_292287.1| TPR repeat-containing protein [Prochlorococcus marinus str. NATL2A]
 gi|72002782|gb|AAZ58584.1| TPR repeat [Prochlorococcus marinus str. NATL2A]
          Length = 685

 Score = 63.9 bits (154), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 60/229 (26%), Positives = 107/229 (46%), Gaps = 22/229 (9%)

Query: 155 KAFADLDEAE-------KVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVA 207
           K+   L EAE       ++ P+ A ++   G I    G+ EEA  +  K I LNP+F   
Sbjct: 90  KSLGKLQEAELSTRKAIEIKPDYAKAHLNLGIILSDLGKLEEAELSYRKAIELNPDF--- 146

Query: 208 RAQRHFVVHKMIVPGDRERVEQSLKEFRNFVDTHSNVVEACTLFAQVLVDQEDFDGAEEY 267
            A+ H+ +   I+  D  ++E++   +   ++ + N  EA +    +L D      AE  
Sbjct: 147 -AEAHYNLG--IILSDLGKLEEAELSYCKAIELNPNFAEAHSNLGNILKDLGKLQEAELS 203

Query: 268 FNRSIRVDPENASLYVHRAMLMLQARGNVDEAIKLIEKAISIDKSCMFAYETLGTIEVQR 327
           + ++I ++P+ A  + +  +L L+  G ++EA     KAI ++     A+  LG I    
Sbjct: 204 YRKTIELNPDFADAHYNLGVL-LKELGKLEEAELSYRKAIELNPDFANAHYNLGIILKDL 262

Query: 328 GRLEEAVKCFNKALPLARDEAE--------LSHIYSLRDAAIAQMKVCE 368
           G+LEEA     KA+ +  D A+        L  +  L++A ++  K  E
Sbjct: 263 GKLEEAELSCRKAIKIKPDYADSHYNLGVLLKELGKLQEAELSYRKAIE 311



 Score = 59.3 bits (142), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 54/218 (24%), Positives = 106/218 (48%), Gaps = 22/218 (10%)

Query: 138 AHIKRAVVHLHAASDFTKAFADLDEAE-------KVDPNVADSYYQRGQIYCLFGQYEEA 190
           AH+   ++     SD  K    L+EAE       +++P+ A+++Y  G I    G+ EEA
Sbjct: 115 AHLNLGII----LSDLGK----LEEAELSYRKAIELNPDFAEAHYNLGIILSDLGKLEEA 166

Query: 191 LRNLDKTIALNPNFHVARAQRHFVVHKMIVPGDRERVEQSLKEFRNFVDTHSNVVEACTL 250
             +  K I LNPNF  A +    ++       D  +++++   +R  ++ + +  +A   
Sbjct: 167 ELSYCKAIELNPNFAEAHSNLGNILK------DLGKLQEAELSYRKTIELNPDFADAHYN 220

Query: 251 FAQVLVDQEDFDGAEEYFNRSIRVDPENASLYVHRAMLMLQARGNVDEAIKLIEKAISID 310
              +L +    + AE  + ++I ++P+ A+ + +   ++L+  G ++EA     KAI I 
Sbjct: 221 LGVLLKELGKLEEAELSYRKAIELNPDFANAHYNLG-IILKDLGKLEEAELSCRKAIKIK 279

Query: 311 KSCMFAYETLGTIEVQRGRLEEAVKCFNKALPLARDEA 348
                ++  LG +  + G+L+EA   + KA+ L  D A
Sbjct: 280 PDYADSHYNLGVLLKELGKLQEAELSYRKAIELNPDFA 317



 Score = 44.7 bits (104), Expect = 0.12,   Method: Compositional matrix adjust.
 Identities = 68/246 (27%), Positives = 98/246 (39%), Gaps = 33/246 (13%)

Query: 288 LMLQARGNVDEAIKLIEKAISIDKSCMFAYETLGTIEVQRGRLEEAVKCFNKALPLARDE 347
           ++L++ G + EA     KAI I      A+  LG I    G+LEEA   + KA+ L  D 
Sbjct: 87  IILKSLGKLQEAELSTRKAIEIKPDYAKAHLNLGIILSDLGKLEEAELSYRKAIELNPDF 146

Query: 348 AE--------LSHIYSLRDAAIAQMKVCERYNIKKKVSPRSQNITKN-EKLAIKQLRENN 398
           AE        LS +  L +A ++  K  E      +      NI K+  KL   +L    
Sbjct: 147 AEAHYNLGIILSDLGKLEEAELSYCKAIELNPNFAEAHSNLGNILKDLGKLQEAELSYRK 206

Query: 399 DIIIRPADKGGKTVVMDKADYTQKMTSILNS-NDYEIIPGDPTKTIEESEKYGNLENESG 457
            I + P          D AD    +  +L      E       K IE +  + N     G
Sbjct: 207 TIELNP----------DFADAHYNLGVLLKELGKLEEAELSYRKAIELNPDFANAHYNLG 256

Query: 458 QKHAASDFTKAFADLDEAE-------KVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTI 510
                    K    L+EAE       K+ P+ ADS+Y  G +    G+ +EA  +  K I
Sbjct: 257 I------ILKDLGKLEEAELSCRKAIKIKPDYADSHYNLGVLLKELGKLQEAELSYRKAI 310

Query: 511 ALNPNF 516
            LNP+F
Sbjct: 311 ELNPDF 316


>gi|40063048|gb|AAR37904.1| TPR domain protein [uncultured marine bacterium 560]
          Length = 732

 Score = 63.9 bits (154), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 51/222 (22%), Positives = 103/222 (46%), Gaps = 12/222 (5%)

Query: 128 TSVDPKIKVNAHIKRAVVHLHAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQY 187
           T+  P+ ++N+     V+ L+++    +A   ++   K  PN    Y   G  Y   GQ 
Sbjct: 3   TASPPQTEINS-----VITLYSSGQIQEALDTVETLTKDFPNEPLLYNISGVCYKTIGQL 57

Query: 188 EEALRNLDKTIALNPNFHVARAQRHFVVHKMIVPGDRERVEQSLKEFRNFVDTHSNVVEA 247
           + A+++ +K +A+ P++            ++       +++ ++K + + +  +    EA
Sbjct: 58  DVAVKSFEKALAIKPDYTEVNYNLGLTFQEL------GQLDAAVKCYEDVLAVNPEHAEA 111

Query: 248 CTLFAQVLVDQEDFDGAEEYFNRSIRVDPENASLYVHRAMLMLQARGNVDEAIKLIEKAI 307
                  L + E  D A + + ++I + P+ A  + +     L+  G +D A+K  EKAI
Sbjct: 112 HNNLGVTLKELEQLDAAVKSYEKAIAIKPDYAEAHNNLGN-ALKELGQLDVAVKSYEKAI 170

Query: 308 SIDKSCMFAYETLGTIEVQRGRLEEAVKCFNKALPLARDEAE 349
           +I       +  LG      G+L+EAVKC+ +A+ +  D AE
Sbjct: 171 AIKPDFAETHNNLGNALQGLGQLDEAVKCYEQAIAIKPDYAE 212



 Score = 48.9 bits (115), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 64/272 (23%), Positives = 115/272 (42%), Gaps = 30/272 (11%)

Query: 258 QEDFDGAEEYFNRSIRVDPENASLYVHRAMLMLQARGNVDEAIKLIEKAISIDKSCMFAY 317
           QE  D  E     ++  D  N  L  + + +  +  G +D A+K  EKA++I        
Sbjct: 24  QEALDTVE-----TLTKDFPNEPLLYNISGVCYKTIGQLDVAVKSFEKALAIKPDYTEVN 78

Query: 318 ETLGTIEVQRGRLEEAVKCFNKALPLARDEAELSHIYSLRDAAIAQM-KVCERYNIKKKV 376
             LG    + G+L+ AVKC+   L +  + AE  +   +    + Q+    + Y     +
Sbjct: 79  YNLGLTFQELGQLDAAVKCYEDVLAVNPEHAEAHNNLGVTLKELEQLDAAVKSYEKAIAI 138

Query: 377 SPRSQNITKNEKLAIKQLRENNDIIIRPADKGGKTVVMDKADYTQKMTSILNSNDYEIIP 436
            P       N   A+K+L +  D+ ++  +K     +  K D+ +   ++ N+       
Sbjct: 139 KPDYAEAHNNLGNALKELGQL-DVAVKSYEKA----IAIKPDFAETHNNLGNALQGLGQL 193

Query: 437 GDPTKTIEES--------EKYGNLE---NESGQKHAA-SDFTKAFADLDEAEKVDPNVAD 484
            +  K  E++        E + NL     E GQ  AA   + KA A       + P+ A+
Sbjct: 194 DEAVKCYEQAIAIKPDYAEAHNNLGISLRELGQVDAAVKSYEKALA-------IKPDFAE 246

Query: 485 SYYQRGQIYCLFGQYEEALRNLDKTIALNPNF 516
           +YY RG +     + +EAL +L++ I L P+ 
Sbjct: 247 AYYNRGNVLKGLKRLDEALVSLNRAIVLKPDI 278



 Score = 44.7 bits (104), Expect = 0.14,   Method: Compositional matrix adjust.
 Identities = 54/247 (21%), Positives = 105/247 (42%), Gaps = 17/247 (6%)

Query: 286 AMLMLQARGNVDEAIKLIEKAISIDKSCMFAYETLGTIEVQRGRLEEAVKCFNKALPLAR 345
           +++ L + G + EA+  +E       +    Y   G      G+L+ AVK F KAL +  
Sbjct: 13  SVITLYSSGQIQEALDTVETLTKDFPNEPLLYNISGVCYKTIGQLDVAVKSFEKALAIKP 72

Query: 346 DEAELSHIYSLRDAAIAQMKVCER-YNIKKKVSPRSQNITKNEKLAIKQLRENNDIIIRP 404
           D  E+++   L    + Q+    + Y     V+P       N  + +K+L +     +  
Sbjct: 73  DYTEVNYNLGLTFQELGQLDAAVKCYEDVLAVNPEHAEAHNNLGVTLKELEQ-----LDA 127

Query: 405 ADKGGKTVVMDKADYTQKMTSILNSNDYEIIPGDPTKTIEESEKYGNLENESGQKHA-AS 463
           A K  +  +  K DY +   ++ N+   E+  G     ++  EK   ++ +  + H    
Sbjct: 128 AVKSYEKAIAIKPDYAEAHNNLGNALK-EL--GQLDVAVKSYEKAIAIKPDFAETHNNLG 184

Query: 464 DFTKAFADLDEAEK-------VDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNF 516
           +  +    LDEA K       + P+ A+++   G      GQ + A+++ +K +A+ P+F
Sbjct: 185 NALQGLGQLDEAVKCYEQAIAIKPDYAEAHNNLGISLRELGQVDAAVKSYEKALAIKPDF 244

Query: 517 HVARAQR 523
             A   R
Sbjct: 245 AEAYYNR 251


>gi|427717067|ref|YP_007065061.1| hypothetical protein Cal7507_1771 [Calothrix sp. PCC 7507]
 gi|427349503|gb|AFY32227.1| hypothetical protein Cal7507_1771 [Calothrix sp. PCC 7507]
          Length = 1269

 Score = 63.9 bits (154), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 63/311 (20%), Positives = 136/311 (43%), Gaps = 26/311 (8%)

Query: 81  IRHCTEEIESTSSNHTKALARLLRATVYIFTSQSTKAIEDLTQLVEDTSVDPKIKVNAHI 140
           IR   +  ES++   T  L RL    +   T    ++++ LT       V P +  N   
Sbjct: 531 IRVVYQPKESSAMALTPLLQRLGWQKLIAGTDGLERSLKLLT-------VSPPVDGNESA 583

Query: 141 KRAV---VHLHAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKT 197
           +        L    +   A A   +A ++ P+   +Y Q G      GQ E A+    K 
Sbjct: 584 RSQFEQGKQLAQQGELKAAVASFTKAIRLQPDYIAAYNQLGNALQGLGQIEGAIAAYQKL 643

Query: 198 IALNPNFHVARAQRHF-VVHKMIVPGDRERVEQSLKEFRNFVDTHSNVVEACTLFAQVLV 256
           + +NPN  VA+A  +   + +M     + + ++++  ++  +    N   A     ++  
Sbjct: 644 LTINPN--VAQAHCNLGSIWQM-----QGKTQEAIAAYQRAIQLQPNFAVAYLNLGRLYA 696

Query: 257 DQEDFDGAEEYFNRSIRVDPENASLYVHRAMLMLQARGNVDEAIKLIEKAISIDKSCMFA 316
           +Q+ +  A++   +++R+ PE+ + Y +   ++ Q  G +++AI  +  A+      +  
Sbjct: 697 NQQSWLEAKQCLQQAVRLQPESVAAYYNLGNVLGQI-GQIEKAIACLHHALKHQPDFVDT 755

Query: 317 YETLGTIEVQRGRLEEAVKCFNKALPLARD----EAELSHIYSLRDAAIAQMKVCERYNI 372
           + +LG + + +G +++A  CF + + L  D       L ++  ++    A +   E YN 
Sbjct: 756 WHSLGCLWMAQGDMDKAQTCFQQVVTLQPDYPQVHGNLGYVLQVQGQLTAAL---ENYNH 812

Query: 373 KKKVSPRSQNI 383
             +++P + NI
Sbjct: 813 ALELNPDATNI 823


>gi|366990777|ref|XP_003675156.1| hypothetical protein NCAS_0B07010 [Naumovozyma castellii CBS 4309]
 gi|28564906|gb|AAO32537.1| TOM70 [Naumovozyma castellii]
 gi|342301020|emb|CCC68785.1| hypothetical protein NCAS_0B07010 [Naumovozyma castellii CBS 4309]
          Length = 625

 Score = 63.9 bits (154), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 66/264 (25%), Positives = 125/264 (47%), Gaps = 24/264 (9%)

Query: 135 KVNAHIKRAVVHLHAAS--DFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALR 192
           +VN+++  A++    ++  +++K F   D+A +++P+    YY RGQ+Y +   Y +A  
Sbjct: 370 RVNSYLYLALISADKSTSQEYSKYF---DKALELNPDSLSVYYHRGQLYFITQDYPKAKV 426

Query: 193 NLDKTIALNPNFHVARAQRHFVVHKMIVPGDRERVEQSLKEFRNFVDTHSNVVEACTLFA 252
             +K   L+        Q   + ++     D +R ++   E R    T+    E  T +A
Sbjct: 427 EFEKAKELDETNIFPYIQLACLAYR---ENDFDRCQKLFDETRQKFPTYP---EVPTFYA 480

Query: 253 QVLVDQEDFDGAEEYFNRSIRVDPENASLYVHRAMLMLQARG--------NVDEAIKLIE 304
           ++L D+ DF  A + ++ + R++    +++V  A L+ +A          N+ EA +L+E
Sbjct: 481 EILADKGDFALAIKQYDIATRLEKAQKNIHVGIAPLVGKATVLARQPNLLNLKEATQLME 540

Query: 305 KAISIDKSCMFAYETLGTIEVQRGRLEEAVKCFNKALPLARDEAELSHIYSLRDAAIAQM 364
           KA  ID     A   L  +++Q   ++ A++ F KA  L+R   E     +  +AA  Q 
Sbjct: 541 KACEIDPRSEQAIVGLAQLKLQNEEVDLAIELFEKAADLSRTMDEKIQAMTFAEAAKIQK 600

Query: 365 KVCERYNIKKKV-----SPRSQNI 383
           ++     I  KV     S RSQ +
Sbjct: 601 RIRADPVISAKVDEALASYRSQGV 624


>gi|260765343|gb|ACX49736.1| conserved hypothetical protein [uncultured marine bacterium 1k6]
          Length = 599

 Score = 63.9 bits (154), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 57/217 (26%), Positives = 97/217 (44%), Gaps = 17/217 (7%)

Query: 129 SVDPKIK----VNAHIKRAVVHLHAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLF 184
           S+DP       VN  +   +     A DF      LD+A ++DP+   +Y  R +I+   
Sbjct: 285 SLDPNYADAFVVNGTVMSQLEDQEGALDF------LDQALEIDPDHVAAYQLRSEIWFEL 338

Query: 185 GQYEEALRNLDKTIALNPNFHVARAQRHFVVHKMIVPGDRERVEQSLKEFRNFVDTHSNV 244
            ++++A  +LD  + L P    AR  +   VH ++   D    E S      FVD   + 
Sbjct: 339 SEWQKAADDLDTLLNLTPGNGEARLTK-ITVHTLLSQYDEADAEASY-----FVDKFPDN 392

Query: 245 VEACTLFAQVLVDQEDFDGAEEYFNRSIRVDPENASLYVHRAMLMLQARGNVDEAIKLIE 304
               T  A +      +D A +  N +IR++P+    Y+HR  L  + + +   AI+   
Sbjct: 393 PLLLTARAGIRQMGARYDDAIDDLNAAIRMEPDAPEGYLHRGHLRFETK-DYPLAIEDYT 451

Query: 305 KAISIDKSCMFAYETLGTIEVQRGRLEEAVKCFNKAL 341
            A+ I+   + A  + G + ++ GR  EA+ C N AL
Sbjct: 452 HALVIEPDFLPALTSRGLVLLKVGRFAEALDCANAAL 488


>gi|409993894|ref|ZP_11277020.1| hypothetical protein APPUASWS_22318 [Arthrospira platensis str.
           Paraca]
 gi|291569299|dbj|BAI91571.1| TPR domain protein [Arthrospira platensis NIES-39]
 gi|409935242|gb|EKN76780.1| hypothetical protein APPUASWS_22318 [Arthrospira platensis str.
           Paraca]
          Length = 530

 Score = 63.9 bits (154), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 67/277 (24%), Positives = 115/277 (41%), Gaps = 24/277 (8%)

Query: 251 FAQVLVDQEDFDGAEEYFNRSIRVDPENASLYVHRAMLMLQARGNVDEAIKLIEKAISID 310
             + L  Q   D A   + ++  ++P +A  Y +   L+ Q +GN+ EA+    KAI +D
Sbjct: 42  LGEALSQQGKIDEAIAAYRQATELNPNSAWSYDNLGTLLNQ-QGNLPEAVSCFRKAIELD 100

Query: 311 KSCMFAYETLGTIEVQRGRLEEAVKCFNKALPLARDEAELSHIYSLRDAAIAQMKVCE-- 368
                 Y  L  + ++ GRLEEAV    KA+ L  D+AEL H  SL  A   Q +  E  
Sbjct: 101 PDFSEFYHNLALVLIKEGRLEEAVSLLQKAIELKADDAELYH--SLGKAYQQQQQYSEAV 158

Query: 369 -RYNIKKKVSPRSQNITKNEKLAIKQLRENNDIIIRPADKGGKTVVMDKADYTQKMTSIL 427
             Y    +++P   +   +    ++ L E  + I   + +    +    ++   K+ ++L
Sbjct: 159 TAYRQGLELNPYWSDCYLSLGQTLEALGETEEAIA--SYRRSYELNPSLSEALPKLQTVL 216

Query: 428 NSND-YEIIPG--------DPTKTIEESEKYGNLENESGQKHAASDFTKAFADLDEAEKV 478
            S   +E +          DP        +   L N      AA  + KA        ++
Sbjct: 217 ESQGRWEELATLYRRCCIVDPNSATSHKYQGTALANSGKLSEAAESYQKAL-------EL 269

Query: 479 DPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPN 515
           DPN+ +     GQ+     Q+E A+    K   ++PN
Sbjct: 270 DPNLVEILQPLGQVLTQLNQWEAAVDIFQKATQVDPN 306



 Score = 61.6 bits (148), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 36/105 (34%), Positives = 57/105 (54%), Gaps = 1/105 (0%)

Query: 252 AQVLVDQEDFDGAEEYFNRSIRVDPENASLYVHRAMLMLQARGNVDEAIKLIEKAISIDK 311
           A  L+ +   D A   +N++I   P++A  Y H     L  +G +DEAI    +A  ++ 
Sbjct: 9   ANQLLRKGQLDEAIASYNQAIAESPQSA-WYYHNLGEALSQQGKIDEAIAAYRQATELNP 67

Query: 312 SCMFAYETLGTIEVQRGRLEEAVKCFNKALPLARDEAELSHIYSL 356
           +  ++Y+ LGT+  Q+G L EAV CF KA+ L  D +E  H  +L
Sbjct: 68  NSAWSYDNLGTLLNQQGNLPEAVSCFRKAIELDPDFSEFYHNLAL 112



 Score = 55.8 bits (133), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 84/373 (22%), Positives = 157/373 (42%), Gaps = 50/373 (13%)

Query: 185 GQYEEALRNLDKTIALNPNFHVARAQRHFVVHKMI-VPGDRERVEQSLKEFRNFVDTHSN 243
           GQ +EA+ + ++ IA +P       Q  +  H +      + ++++++  +R   + + N
Sbjct: 16  GQLDEAIASYNQAIAESP-------QSAWYYHNLGEALSQQGKIDEAIAAYRQATELNPN 68

Query: 244 VVEACTLFAQVLVDQEDFDGAEEYFNRSIRVDPENASLYVHRAMLMLQARGNVDEAIKLI 303
              +      +L  Q +   A   F ++I +DP+ +  Y H   L+L   G ++EA+ L+
Sbjct: 69  SAWSYDNLGTLLNQQGNLPEAVSCFRKAIELDPDFSEFY-HNLALVLIKEGRLEEAVSLL 127

Query: 304 EKAISIDKSCMFAYETLGTIEVQRGRLEEAVKCFNKALPL--ARDEAELSHIYSLR---- 357
           +KAI +       Y +LG    Q+ +  EAV  + + L L     +  LS   +L     
Sbjct: 128 QKAIELKADDAELYHSLGKAYQQQQQYSEAVTAYRQGLELNPYWSDCYLSLGQTLEALGE 187

Query: 358 -DAAIAQMKVCERYNIKKKVS---PRSQNITKN----EKLAIKQLRENNDIIIRP----A 405
            + AIA  +    Y +   +S   P+ Q + ++    E+LA    R     I+ P    +
Sbjct: 188 TEEAIASYR--RSYELNPSLSEALPKLQTVLESQGRWEELATLYRR---CCIVDPNSATS 242

Query: 406 DKGGKTVVMDKADYTQKMTSILNSNDYEIIPGDPTKTIEESEKYGNLENESGQKHAASDF 465
            K   T + +    ++   S   +     +  DP   +E  +  G +  +  Q  AA D 
Sbjct: 243 HKYQGTALANSGKLSEAAESYQKA-----LELDPN-LVEILQPLGQVLTQLNQWEAAVDI 296

Query: 466 TKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPN-----FHVAR 520
                   +A +VDPN A  Y+Q GQ      +  EAL    +   L+P      F + +
Sbjct: 297 ------FQKATQVDPNSASFYHQLGQALAKCDRLLEALAAYKRASELHPTSTPVLFDLGQ 350

Query: 521 A-QRHFVWTSTLA 532
           A  + + W+  +A
Sbjct: 351 ALTKLYHWSEAIA 363



 Score = 50.1 bits (118), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 51/214 (23%), Positives = 89/214 (41%), Gaps = 11/214 (5%)

Query: 153 FTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQRH 212
             +A A    A ++ P      +  GQ       + EA+    K + LNP       Q  
Sbjct: 324 LLEALAAYKRASELHPTSTPVLFDLGQALTKLYHWSEAIATYQKALYLNP-----PNQAE 378

Query: 213 FVVHKMIVPGDRERVEQSLKEFRNFVDTHSNVVEACTLFAQVLVDQEDFDGAEEYFNRSI 272
              H   V   +  +++ +  + +  + H N  E+   FAQ L  +   + A   F+++ 
Sbjct: 379 IQTHLQEVQDKQRHLDEEIAAYSDSHEFHPNSSESYEKFAQFLRSKGKIEDAIIGFHQAC 438

Query: 273 RVDPENASLYVHRAMLMLQARGN-VDEAIKLIEKAISIDKSCMFAYETLGTIEVQRGRLE 331
            ++P++A    H  +    ARG   DEAI   +KA  ++         LG   V+ GRL+
Sbjct: 439 ILNPQSA--VAHHQLGYTLARGQRWDEAILAYQKAAELNPYSPHVQYHLGEALVEEGRLD 496

Query: 332 EAVKCFNKALPLARDEAELSHIYSLRDAAIAQMK 365
           EA+  F +++ +   + E    Y     AIA+ K
Sbjct: 497 EAIAHFKQSITI---DPEFEEGYDALRQAIAKKK 527



 Score = 48.5 bits (114), Expect = 0.009,   Method: Compositional matrix adjust.
 Identities = 75/384 (19%), Positives = 155/384 (40%), Gaps = 34/384 (8%)

Query: 155 KAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQRHFV 214
           +A + L +A ++  + A+ Y+  G+ Y    QY EA+    + + LNP +          
Sbjct: 122 EAVSLLQKAIELKADDAELYHSLGKAYQQQQQYSEAVTAYRQGLELNPYWSDCYLSLGQT 181

Query: 215 VHKMIVPGDRERVEQSLKEFRNFVDTHSNVVEACTLFAQVLVDQEDFDGAEEYFNRSIRV 274
           +  +         E+++  +R   + + ++ EA      VL  Q  ++     + R   V
Sbjct: 182 LEAL------GETEEAIASYRRSYELNPSLSEALPKLQTVLESQGRWEELATLYRRCCIV 235

Query: 275 DPENASLYVHRAMLMLQARGNVDEAIKLIEKAISIDKSCMFAYETLGTIEVQRGRLEEAV 334
           DP +A+ + ++   +  + G + EA +  +KA+ +D + +   + LG +  Q  + E AV
Sbjct: 236 DPNSATSHKYQGTALANS-GKLSEAAESYQKALELDPNLVEILQPLGQVLTQLNQWEAAV 294

Query: 335 KCFNKALPLARDEAELSHIYSLRDAAIAQMKVCER-------YNIKKKVSPRSQNITKNE 387
             F KA  +  + A   H   L  A    +  C+R       Y    ++ P S  +  + 
Sbjct: 295 DIFQKATQVDPNSASFYH--QLGQA----LAKCDRLLEALAAYKRASELHPTSTPVLFDL 348

Query: 388 KLAIKQLRENNDIIIRPADKGGKTVVMDKADYTQKMTSILNSNDYEIIPGDPTKTIEESE 447
             A+ +L   ++ I        K + ++  +  +  T +    D +    +      +S 
Sbjct: 349 GQALTKLYHWSEAIA----TYQKALYLNPPNQAEIQTHLQEVQDKQRHLDEEIAAYSDSH 404

Query: 448 KYGNLENESGQKHAA-----SDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEA 502
           ++    +ES +K A           A     +A  ++P  A +++Q G       +++EA
Sbjct: 405 EFHPNSSESYEKFAQFLRSKGKIEDAIIGFHQACILNPQSAVAHHQLGYTLARGQRWDEA 464

Query: 503 LRNLDKTIALNP-----NFHVARA 521
           +    K   LNP      +H+  A
Sbjct: 465 ILAYQKAAELNPYSPHVQYHLGEA 488



 Score = 48.1 bits (113), Expect = 0.011,   Method: Compositional matrix adjust.
 Identities = 74/365 (20%), Positives = 136/365 (37%), Gaps = 50/365 (13%)

Query: 155 KAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQRHFV 214
           +A A   +A +++PN A SY   G +    G   EA+    K I L+P+F        F 
Sbjct: 54  EAIAAYRQATELNPNSAWSYDNLGTLLNQQGNLPEAVSCFRKAIELDPDF------SEFY 107

Query: 215 VHKMIVPGDRERVEQSLKEFRNFVDTHSNVVEACTLFAQVLVDQEDFDGAEEYFNRSIRV 274
            +  +V     R+E+++   +  ++  ++  E      +    Q+ +  A   + + + +
Sbjct: 108 HNLALVLIKEGRLEEAVSLLQKAIELKADDAELYHSLGKAYQQQQQYSEAVTAYRQGLEL 167

Query: 275 DPENASLYVHRAMLMLQARGNVDEAIKLIEKAISIDKSCMFAYETLGTIEVQRGRLEEAV 334
           +P  +  Y+      L+A G  +EAI    ++  ++ S   A   L T+   +GR EE  
Sbjct: 168 NPYWSDCYLSLGQ-TLEALGETEEAIASYRRSYELNPSLSEALPKLQTVLESQGRWEELA 226

Query: 335 KCFNKALPLARDEAELSHIYSLRDAAIAQ----MKVCERYNIKKKVSPRSQNITKNEKLA 390
             + +   +  + A  SH Y  +  A+A      +  E Y    ++ P    I +     
Sbjct: 227 TLYRRCCIVDPNSA-TSHKY--QGTALANSGKLSEAAESYQKALELDPNLVEILQPLGQV 283

Query: 391 IKQLRENNDIIIRPADKGGKTVVMDKADYTQKMTSILNSNDYEIIPGDPTKTIEESEKYG 450
           + QL +    +                D  QK T +           DP           
Sbjct: 284 LTQLNQWEAAV----------------DIFQKATQV-----------DPNS--------A 308

Query: 451 NLENESGQKHAASD-FTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKT 509
           +  ++ GQ  A  D   +A A    A ++ P      +  GQ       + EA+    K 
Sbjct: 309 SFYHQLGQALAKCDRLLEALAAYKRASELHPTSTPVLFDLGQALTKLYHWSEAIATYQKA 368

Query: 510 IALNP 514
           + LNP
Sbjct: 369 LYLNP 373



 Score = 46.6 bits (109), Expect = 0.030,   Method: Compositional matrix adjust.
 Identities = 46/236 (19%), Positives = 99/236 (41%), Gaps = 31/236 (13%)

Query: 153 FTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQRH 212
           +++A     +  +++P  +D Y   GQ     G+ EEA+ +  ++  LNP+   A  +  
Sbjct: 154 YSEAVTAYRQGLELNPYWSDCYLSLGQTLEALGETEEAIASYRRSYELNPSLSEALPKLQ 213

Query: 213 FVV----------------------------HKMIVPGDRERVEQSLKEFRNFVDTHSNV 244
            V+                            ++     +  ++ ++ + ++  ++   N+
Sbjct: 214 TVLESQGRWEELATLYRRCCIVDPNSATSHKYQGTALANSGKLSEAAESYQKALELDPNL 273

Query: 245 VEACTLFAQVLVDQEDFDGAEEYFNRSIRVDPENASLYVHRAMLMLQARGNVDEAIKLIE 304
           VE      QVL     ++ A + F ++ +VDP +AS Y H+    L     + EA+   +
Sbjct: 274 VEILQPLGQVLTQLNQWEAAVDIFQKATQVDPNSASFY-HQLGQALAKCDRLLEALAAYK 332

Query: 305 KAISIDKSCMFAYETLGTIEVQRGRLEEAVKCFNKALPL-ARDEAEL-SHIYSLRD 358
           +A  +  +       LG    +     EA+  + KAL L   ++AE+ +H+  ++D
Sbjct: 333 RASELHPTSTPVLFDLGQALTKLYHWSEAIATYQKALYLNPPNQAEIQTHLQEVQD 388



 Score = 44.3 bits (103), Expect = 0.17,   Method: Compositional matrix adjust.
 Identities = 94/454 (20%), Positives = 175/454 (38%), Gaps = 98/454 (21%)

Query: 147 LHAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPN--- 203
           L+   +  +A +   +A ++DP+ ++ Y+    +    G+ EEA+  L K I L  +   
Sbjct: 80  LNQQGNLPEAVSCFRKAIELDPDFSEFYHNLALVLIKEGRLEEAVSLLQKAIELKADDAE 139

Query: 204 -FH-VARAQRHFVVHKMIVPGDRE-----------------------RVEQSLKEFRNFV 238
            +H + +A +    +   V   R+                         E+++  +R   
Sbjct: 140 LYHSLGKAYQQQQQYSEAVTAYRQGLELNPYWSDCYLSLGQTLEALGETEEAIASYRRSY 199

Query: 239 DTHSNVVEACTLFAQVLVDQEDFDGAEEYFNRSIRVDPENASLYVHRAMLMLQARGNVDE 298
           + + ++ EA      VL  Q  ++     + R   VDP +A+ + ++   +  + G + E
Sbjct: 200 ELNPSLSEALPKLQTVLESQGRWEELATLYRRCCIVDPNSATSHKYQGTALANS-GKLSE 258

Query: 299 AIKLIEKAISIDKSCMFAYETLGTIEVQRGRLEEAVKCFNKALPLARDEAELSHIYSLRD 358
           A +  +KA+ +D + +   + LG +  Q  + E AV  F KA  +  + A   H   L  
Sbjct: 259 AAESYQKALELDPNLVEILQPLGQVLTQLNQWEAAVDIFQKATQVDPNSASFYH--QLGQ 316

Query: 359 AAIAQMKVCER-------YNIKKKVSPRSQNITKNEKLAIKQLRENNDIIIRPADKGGKT 411
           A    +  C+R       Y    ++ P S  +  +   A+ +L   ++ I          
Sbjct: 317 A----LAKCDRLLEALAAYKRASELHPTSTPVLFDLGQALTKLYHWSEAI---------- 362

Query: 412 VVMDKADYTQKMTSILNSNDYEIIPGDPTKTIEESEKYGNLENESGQKHAASDFTKAFAD 471
                A Y QK   +   N  EI     T   E  +K  +L+ E            A++D
Sbjct: 363 -----ATY-QKALYLNPPNQAEI----QTHLQEVQDKQRHLDEE----------IAAYSD 402

Query: 472 LDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNP---------NFHVARAQ 522
             E     PN ++SY +  Q     G+ E+A+    +   LNP          + +AR Q
Sbjct: 403 SHE---FHPNSSESYEKFAQFLRSKGKIEDAIIGFHQACILNPQSAVAHHQLGYTLARGQ 459

Query: 523 RHFVWTSTL------AELMAFSDEFMIPKITYYI 550
           R   W   +      AEL  +S     P + Y++
Sbjct: 460 R---WDEAILAYQKAAELNPYS-----PHVQYHL 485


>gi|256841847|ref|ZP_05547353.1| TPR-domain-containing protein [Parabacteroides sp. D13]
 gi|256736741|gb|EEU50069.1| TPR-domain-containing protein [Parabacteroides sp. D13]
          Length = 321

 Score = 63.9 bits (154), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 51/189 (26%), Positives = 90/189 (47%), Gaps = 17/189 (8%)

Query: 101 RLLRATVYIFTSQSTKAIEDLTQLVEDTSVDPKIKVNAHIKRAVVHLHAASDFTKAFADL 160
           RL R  +     +  + I D   ++E   ++P   V A+   A     A +D   A ADL
Sbjct: 99  RLTRVNLLFMLDKDAEVITDCLHVIE---LEPSNHV-AYFMMAKAK-KATNDVFGAIADL 153

Query: 161 DEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNP---NFHVARAQRHFVVHK 217
             +  +  + ADSY  R +I    GQ +EAL +++K I + P   + ++ R + H  +  
Sbjct: 154 TRSIALKEDFADSYLLRAEILLGLGQAKEALPDVEKAIEIVPEEESSYLLRGRIHMAL-- 211

Query: 218 MIVPGDRERVEQSLKEFRNFVDTHSNVVEACTLFAQVLVDQEDFDGAEEYFNRSIRVDPE 277
               GD   +E +  +F+  +D +    +AC L  Q+L++Q+ +D A  +F+ +I  +P 
Sbjct: 212 ----GD---IEAANSDFQQVLDLNPFNEDACILSGQLLIEQKKYDEAIAFFDEAIETNPS 264

Query: 278 NASLYVHRA 286
            A  Y  R 
Sbjct: 265 FAKAYSERG 273


>gi|428313062|ref|YP_007124039.1| hypothetical protein Mic7113_4972 [Microcoleus sp. PCC 7113]
 gi|428254674|gb|AFZ20633.1| TPR repeat-containing protein [Microcoleus sp. PCC 7113]
          Length = 528

 Score = 63.9 bits (154), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 48/196 (24%), Positives = 92/196 (46%), Gaps = 11/196 (5%)

Query: 153 FTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQRH 212
           + +A +  ++A ++ PN  +++   G       +YEEA+   D+ I + PN+H+A + R 
Sbjct: 180 YEEAISAYNQAVQIQPNFPEAWNNGGLALANLQRYEEAIAAYDQAIQIQPNYHLAWSNRG 239

Query: 213 FVVHKMIVPGDRERVEQSLKEFRNFVDTHSNVVEACTLFAQVLVDQEDFDGAEEYFNRSI 272
             +  +      +R E++L  +   +    ++     L   +L D + +  +   F R+I
Sbjct: 240 DALVNL------QRYEEALASYERAIQLKPDIPNVWFLHGAMLFDLQRYQESIASFKRAI 293

Query: 273 RVDPE-NASLYVH-RAMLMLQARGNVDEAIKLIEKAISIDKSCMFAYETLGTIEVQRGRL 330
           ++ PE N + Y    AML LQ   + +EAI    +AI      + A+   G   +   R 
Sbjct: 294 QIQPEFNEAWYFQGNAMLNLQ---HYEEAINSYNRAIKSKPDLLEAWYNRGVALMNLQRN 350

Query: 331 EEAVKCFNKALPLARD 346
           E+A   F++A+ L  D
Sbjct: 351 EDAFVSFDRAIQLKSD 366



 Score = 44.3 bits (103), Expect = 0.15,   Method: Compositional matrix adjust.
 Identities = 62/334 (18%), Positives = 135/334 (40%), Gaps = 48/334 (14%)

Query: 186 QYEEALRNLDKTIALNPNFHVARAQRHFVVHKMIVPGDRERVEQSLKEFRNFVDTHSNVV 245
           +YEEA+   ++ + + PNF  A       +  +      +R E+++  +   +    N  
Sbjct: 179 RYEEAISAYNQAVQIQPNFPEAWNNGGLALANL------QRYEEAIAAYDQAIQIQPNYH 232

Query: 246 EACTLFAQVLVDQEDFDGAEEYFNRSIRVDPENASLY-VHRAMLMLQARGNVDEAIKLIE 304
            A +     LV+ + ++ A   + R+I++ P+  +++ +H AML    R    E+I   +
Sbjct: 233 LAWSNRGDALVNLQRYEEALASYERAIQLKPDIPNVWFLHGAMLFDLQR--YQESIASFK 290

Query: 305 KAISIDKSCMFAYETLGTIEVQRGRLEEAVKCFNKALPLARDEAELSHIYSLRDAAIAQM 364
           +AI I      A+   G   +     EEA+  +N+A+   + + +L   +  R  A+   
Sbjct: 291 RAIQIQPEFNEAWYFQGNAMLNLQHYEEAINSYNRAI---KSKPDLLEAWYNRGVAL--- 344

Query: 365 KVCERYNIKKKVSPRSQNITKNEKLAI---KQLRENNDIIIRPADKGGKTVVMDKADYTQ 421
                            N+ +NE   +   + ++  +D      ++G   V+ +   Y +
Sbjct: 345 ----------------MNLQRNEDAFVSFDRAIQLKSDFSDAWFNRG--LVLFNLKRYEE 386

Query: 422 KMTSILNSNDYEIIPGDPTKTIEESEKYGNLENESGQKHAASDFTKAFADLDEAEKVDPN 481
            + S       ++ P      +      G L+           + +A    D A ++ P 
Sbjct: 387 SVASF--DRVIQLKPDIAEVWLFRGSALGELQR----------YAEALVCCDRAIQLKPE 434

Query: 482 VADSYYQRGQIYCLFGQYEEALRNLDKTIALNPN 515
           + +++  RG ++    Q+EEA+   D+ I   P+
Sbjct: 435 LLEAWSVRGVVFAKLQQHEEAIAACDQVIQKKPD 468



 Score = 40.0 bits (92), Expect = 3.2,   Method: Compositional matrix adjust.
 Identities = 37/182 (20%), Positives = 79/182 (43%), Gaps = 18/182 (9%)

Query: 153 FTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQRH 212
           + +A    + A K  P++ +++Y RG       + E+A  + D+ I L  +F  A   R 
Sbjct: 316 YEEAINSYNRAIKSKPDLLEAWYNRGVALMNLQRNEDAFVSFDRAIQLKSDFSDAWFNRG 375

Query: 213 FVVHKMIVPGDRERVEQSLKEFRNFVDTHSNVVEACTLFAQVLVDQEDFDGAEEYFNRSI 272
            V+  +      +R E+S+  F   +    ++ E        L + + +  A    +R+I
Sbjct: 376 LVLFNL------KRYEESVASFDRVIQLKPDIAEVWLFRGSALGELQRYAEALVCCDRAI 429

Query: 273 RVDPENASLYVHRAMLMLQARGNVDEAIKLIEKAIS---------IDKSCMFAYETLGTI 323
           ++ PE    +  R ++  + + + +EAI   ++ I            K+C +A +  G +
Sbjct: 430 QLKPELLEAWSVRGVVFAKLQQH-EEAIAACDQVIQKKPDNPIGWYGKACCYALQ--GNV 486

Query: 324 EV 325
           E+
Sbjct: 487 EL 488



 Score = 38.5 bits (88), Expect = 8.7,   Method: Compositional matrix adjust.
 Identities = 32/155 (20%), Positives = 69/155 (44%), Gaps = 7/155 (4%)

Query: 156 AFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQRHFVV 215
           AF   D A ++  + +D+++ RG +     +YEE++ + D+ I L P+       R   +
Sbjct: 353 AFVSFDRAIQLKSDFSDAWFNRGLVLFNLKRYEESVASFDRVIQLKPDIAEVWLFRGSAL 412

Query: 216 HKMIVPGDRERVEQSLKEFRNFVDTHSNVVEACTLFAQVLVDQEDFDGAEEYFNRSIRVD 275
                 G+ +R  ++L      +     ++EA ++   V    +  + A    ++ I+  
Sbjct: 413 ------GELQRYAEALVCCDRAIQLKPELLEAWSVRGVVFAKLQQHEEAIAACDQVIQKK 466

Query: 276 PENASLYVHRAMLMLQARGNVDEAIKLIEKAISID 310
           P+N   +  +A      +GNV+  IK ++    +D
Sbjct: 467 PDNPIGWYGKACCY-ALQGNVELLIKNLQWTFELD 500


>gi|298490872|ref|YP_003721049.1| hypothetical protein Aazo_1811 ['Nostoc azollae' 0708]
 gi|298232790|gb|ADI63926.1| TPR repeat-containing protein ['Nostoc azollae' 0708]
          Length = 523

 Score = 63.9 bits (154), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 66/292 (22%), Positives = 124/292 (42%), Gaps = 18/292 (6%)

Query: 240 THSNVVEACTLFAQVLVDQEDFDGAEEYFNRSIRVDPENASLYVHRAMLMLQARGNVDEA 299
           T SN          +L    +++ A  ++ + ++  P++   + +R   +L   G+ +EA
Sbjct: 219 TDSNRASLLFELGNLLYSAHEYETAITFYEQELKFQPDDHYAWYNRGNALLNL-GDNEEA 277

Query: 300 IKLIEKAISIDKSCMFAYETLGTIEVQRGRLEEAVKCFNKALPLARDE----AELSHIYS 355
           I    +AI I     +A++  G      GR EEA+  +N+A+     +     EL +  +
Sbjct: 278 ILSYNQAIRIKPYDHYAWKNRGNALRNLGRNEEAILSYNEAIDYNSHDHYSWYELGN--T 335

Query: 356 LRDAAIAQMKVCERYNIKKKVSPRSQNITKNEKLAIKQLRENNDIIIRPADKGGKTVVMD 415
           LR+    +  +   YN   K  P    +  N  +A++ LR N + +    D+  K    D
Sbjct: 336 LRNLGRNEEAILS-YNEALKYKPSDHYVWNNRGIALRNLRHNEEAVFS-YDEALKIQPDD 393

Query: 416 KADYTQKMTSI--LNSNDYEIIPGDPTKTIEESEKYGNLENESGQKHAASDFTK---AFA 470
              +  +  ++  L  N+  I   D    +   + Y      + + +A  D  +   A  
Sbjct: 394 YYAWYNRGIALRSLGRNEEAIFSYDQALKLNPYDHYA----WNNRGNALDDLGRTEEAIF 449

Query: 471 DLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQ 522
             D+A K+ P+    +Y +   Y L G  E+AL NL + I+L P   + RA+
Sbjct: 450 SYDQALKIKPDDNYGWYNKACCYALHGDIEQALENLQQAISLQPTEVLTRAK 501



 Score = 48.9 bits (115), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 42/197 (21%), Positives = 89/197 (45%), Gaps = 7/197 (3%)

Query: 147 LHAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHV 206
           L++A ++  A    ++  K  P+   ++Y RG      G  EEA+ + ++ I + P  H 
Sbjct: 234 LYSAHEYETAITFYEQELKFQPDDHYAWYNRGNALLNLGDNEEAILSYNQAIRIKPYDHY 293

Query: 207 ARAQRHFVVHKMIVPGDRERVEQSLKEFRNFVDTHSNVVEACTLFAQVLVDQEDFDGAEE 266
           A   R   +  +       R E+++  +   +D +S+   +       L +    + A  
Sbjct: 294 AWKNRGNALRNL------GRNEEAILSYNEAIDYNSHDHYSWYELGNTLRNLGRNEEAIL 347

Query: 267 YFNRSIRVDPENASLYVHRAMLMLQARGNVDEAIKLIEKAISIDKSCMFAYETLGTIEVQ 326
            +N +++  P +  ++ +R + +   R N +EA+   ++A+ I     +A+   G     
Sbjct: 348 SYNEALKYKPSDHYVWNNRGIALRNLRHN-EEAVFSYDEALKIQPDDYYAWYNRGIALRS 406

Query: 327 RGRLEEAVKCFNKALPL 343
            GR EEA+  +++AL L
Sbjct: 407 LGRNEEAIFSYDQALKL 423


>gi|75909713|ref|YP_324009.1| protein prenyltransferase subunit alpha [Anabaena variabilis ATCC
           29413]
 gi|75703438|gb|ABA23114.1| Protein prenyltransferase, alpha subunit [Anabaena variabilis ATCC
           29413]
          Length = 1007

 Score = 63.9 bits (154), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 47/206 (22%), Positives = 90/206 (43%), Gaps = 10/206 (4%)

Query: 145 VHLHAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNF 204
           V L       +A    D+A +  P+   ++Y RG   C  G++E+A+ + ++ I    NF
Sbjct: 163 VALANLGQLEQAITSFDKAIEFKPDDDSAWYSRGVALCNLGRFEQAIASYNRAIEFKHNF 222

Query: 205 HVARAQRHFVVHKMIVPGDRERVEQSLKEFRNFVDTHSNVVEACTLF---AQVLVDQEDF 261
             A   R  +++ + +       +++L  F   +  + N  E    +      L + E F
Sbjct: 223 PEAWTNRGVILNSLKL------YQEALTSFETALQINPNFPEVFNAWYGRGNTLFNLEKF 276

Query: 262 DGAEEYFNRSIRVDPENASLYVHRAMLMLQARGNVDEAIKLIEKAISIDKSCMFAYETLG 321
           + A   ++++I    ++ S + +R +  L   G  +EAI   +KAI        A+   G
Sbjct: 277 EEAIASYDKAIEFKADDYSAWYNRGV-ALDNLGQFEEAIASYDKAIEFKADDYSAWNYRG 335

Query: 322 TIEVQRGRLEEAVKCFNKALPLARDE 347
                 GR EEA+  ++KA+    D+
Sbjct: 336 VALANLGRFEEAIASYDKAIEFKADD 361



 Score = 50.8 bits (120), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 58/288 (20%), Positives = 120/288 (41%), Gaps = 20/288 (6%)

Query: 268 FNRSIRVDPENASLYVHRAMLMLQARGNVDEAIKLIEKAISIDKSCMFAYETLGTIEVQR 327
           FN +I +  + A  ++++ +  L   G +++AI   +KAI        A+ + G      
Sbjct: 144 FNDAIELTSDEAEAWLNQGV-ALANLGQLEQAITSFDKAIEFKPDDDSAWYSRGVALCNL 202

Query: 328 GRLEEAVKCFNKALPLARDEAELSHIYSLRDAAIAQMKVCER----YNIKKKVSPRSQNI 383
           GR E+A+  +N+A+    +  E    ++ R   +  +K+ +     +    +++P    +
Sbjct: 203 GRFEQAIASYNRAIEFKHNFPE---AWTNRGVILNSLKLYQEALTSFETALQINPNFPEV 259

Query: 384 ------TKNEKLAIKQLRENNDIIIRPADKGGKTVVMDKADYTQKMTSILNSNDYEIIPG 437
                   N    +++  E     I   DK  +    D + +  +  ++ N   +E    
Sbjct: 260 FNAWYGRGNTLFNLEKFEE----AIASYDKAIEFKADDYSAWYNRGVALDNLGQFEEAIA 315

Query: 438 DPTKTIE-ESEKYGNLENESGQKHAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLF 496
              K IE +++ Y               F +A A  D+A +   +   ++Y RG      
Sbjct: 316 SYDKAIEFKADDYSAWNYRGVALANLGRFEEAIASYDKAIEFKADDYSAWYNRGVALSNL 375

Query: 497 GQYEEALRNLDKTIALNPNFHVARAQRHFVWTSTLAELMAFSDEFMIP 544
           G+++EA+ + DK I    +F++A   R  V  + + E + FS  F +P
Sbjct: 376 GRFQEAITSYDKAIEFKADFYIAWMNRGIVAGNVIVERIDFST-FPLP 422



 Score = 50.8 bits (120), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 60/265 (22%), Positives = 109/265 (41%), Gaps = 27/265 (10%)

Query: 117 AIEDLTQLVED-TSVDPKIKV-----NAHIKRAVVHLHAASDFTKAFADLDEAEKVDPNV 170
           A+ +L QL +  TS D  I+      +A   R V  L     F +A A  + A +   N 
Sbjct: 164 ALANLGQLEQAITSFDKAIEFKPDDDSAWYSRGVA-LCNLGRFEQAIASYNRAIEFKHNF 222

Query: 171 ADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNF------HVARAQRHFVVHKMIVPGDR 224
            +++  RG I      Y+EAL + +  + +NPNF         R    F         + 
Sbjct: 223 PEAWTNRGVILNSLKLYQEALTSFETALQINPNFPEVFNAWYGRGNTLF---------NL 273

Query: 225 ERVEQSLKEFRNFVDTHSNVVEACTLFAQVLVDQEDFDGAEEYFNRSIRVDPENASLYVH 284
           E+ E+++  +   ++  ++   A       L +   F+ A   ++++I    ++ S + +
Sbjct: 274 EKFEEAIASYDKAIEFKADDYSAWYNRGVALDNLGQFEEAIASYDKAIEFKADDYSAWNY 333

Query: 285 RAMLMLQARGNVDEAIKLIEKAISIDKSCMFAYETLGTIEVQRGRLEEAVKCFNKALPLA 344
           R +  L   G  +EAI   +KAI        A+   G      GR +EA+  ++KA+   
Sbjct: 334 RGV-ALANLGRFEEAIASYDKAIEFKADDYSAWYNRGVALSNLGRFQEAITSYDKAIEFK 392

Query: 345 RDEAELSHIYSLRDAAIAQMKVCER 369
            D     +I  +    +A   + ER
Sbjct: 393 AD----FYIAWMNRGIVAGNVIVER 413



 Score = 46.6 bits (109), Expect = 0.037,   Method: Compositional matrix adjust.
 Identities = 46/216 (21%), Positives = 89/216 (41%), Gaps = 21/216 (9%)

Query: 160 LDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQRHFVVHKMI 219
            ++A ++  + A+++  +G      GQ E+A+ + DK I   P+   A   R   +  + 
Sbjct: 144 FNDAIELTSDEAEAWLNQGVALANLGQLEQAITSFDKAIEFKPDDDSAWYSRGVALCNL- 202

Query: 220 VPGDRERVEQSLKEFRNFVDTHSNVVEACTLFAQVLVDQEDFDGAEEYFNRSIRVDPENA 279
                 R EQ++  +   ++   N  EA T    +L   + +  A   F  +++++P   
Sbjct: 203 -----GRFEQAIASYNRAIEFKHNFPEAWTNRGVILNSLKLYQEALTSFETALQINPNFP 257

Query: 280 SLYVHRAMLMLQARGNV-------DEAIKLIEKAISIDKSCMFAYETLGTIEVQRGRLEE 332
            ++          RGN        +EAI   +KAI        A+   G      G+ EE
Sbjct: 258 EVFN-----AWYGRGNTLFNLEKFEEAIASYDKAIEFKADDYSAWYNRGVALDNLGQFEE 312

Query: 333 AVKCFNKALPLARDEAELSHIYSLRDAAIAQMKVCE 368
           A+  ++KA+    D+      ++ R  A+A +   E
Sbjct: 313 AIASYDKAIEFKADDYS---AWNYRGVALANLGRFE 345



 Score = 41.6 bits (96), Expect = 1.1,   Method: Compositional matrix adjust.
 Identities = 51/211 (24%), Positives = 87/211 (41%), Gaps = 24/211 (11%)

Query: 117 AIEDLTQLVED-TSVDPKIKVNAHIKRAV----VHLHAASDFTKAFADLDEAEKVDPNVA 171
           A+++L Q  E   S D  I+  A    A     V L     F +A A  D+A +   +  
Sbjct: 303 ALDNLGQFEEAIASYDKAIEFKADDYSAWNYRGVALANLGRFEEAIASYDKAIEFKADDY 362

Query: 172 DSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQRHFVVHKMIVPGDRERVEQSL 231
            ++Y RG      G+++EA+ + DK I    +F++A   R  V   +IV    ER+    
Sbjct: 363 SAWYNRGVALSNLGRFQEAITSYDKAIEFKADFYIAWMNRGIVAGNVIV----ERI---- 414

Query: 232 KEFRNFVDTHSNVVEACTLFAQVLVDQEDFDGAEEYFNRSIR-----VDPENASLYVHRA 286
            +F  F   H+        F    +++  ++G    +   ++       PE     +HRA
Sbjct: 415 -DFSTFPLPHAAAHNLALKFNNPDLNKRGYEGRLASYEEGLKHCQQETHPEGWG-KLHRA 472

Query: 287 ML---MLQARGNVDEAIKLIEKAISIDKSCM 314
           +      Q RGN +       KAI+  K+ +
Sbjct: 473 IGDSHYYQGRGNYNTRY-FWRKAINSYKTAL 502


>gi|338210307|ref|YP_004654354.1| hypothetical protein [Runella slithyformis DSM 19594]
 gi|336304120|gb|AEI47222.1| Tetratricopeptide TPR_2 repeat-containing protein [Runella
           slithyformis DSM 19594]
          Length = 352

 Score = 63.9 bits (154), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 82/333 (24%), Positives = 142/333 (42%), Gaps = 55/333 (16%)

Query: 55  DTNESHELDLLSKAKRAFEHEDYLTAIRHCTEEIESTSS---NHTKALARLLRATVYIFT 111
           D +++       K   A E ++Y  AIR+  E +E  +     H+       R   Y+  
Sbjct: 31  DQDQTEAARFFLKGNLALEQKEYAGAIRYYNEALEKQNDLPDVHSN------RGIAYLRM 84

Query: 112 SQSTKAIEDLTQLVE-DTSVDPKIKVNAHIKRAVVHLHAASDFTKAFADLDEAEKVDPNV 170
            +  KA+ED  + +E D + D      A+  RA V L   ++F  A ADL++  K   + 
Sbjct: 85  GELDKALEDFNKALEIDKNFD-----QAYFNRAGV-LIDKNEFAPAAADLEQIRKAYQDS 138

Query: 171 ADSYYQRGQIYCLFGQYEEALRNLDKTIALNP-----------------NFHVARA---- 209
           ++ Y + G +    G YE+AL   D+ + L P                 NF  A+A    
Sbjct: 139 SNYYLKWGDLKSQQGYYEQALSEYDRALTLRPENVQALVNRGAVYFTGKNFKEAQADFEK 198

Query: 210 ------QRHFVVHKM-IVPGDRERVEQSLKEFRNFVD--THSNVVEACTLF--AQVLVDQ 258
                 Q+    + + ++     + E++LK    F+D     +VV    L     VL+ Q
Sbjct: 199 ALQLNPQQELAYNNLALIFARNNQPEKALK----FIDRALDFDVVNPIYLNNKGYVLLLQ 254

Query: 259 EDFDGAEEYFNRSIRVDPENASLYVHR-AMLMLQARGNVDEAIKLIEKAISIDKSCMFAY 317
            + + A++  ++S+   PEN+  Y HR + L    +    EA+   +KA S+D S    +
Sbjct: 255 NNLEEAKKLIDQSLAKAPENS--YAHRNSGLYFLRKNQTAEALAAFKKAYSLDPSTDQIH 312

Query: 318 ETLGTIEVQRGRLEEAVKCFNKALPLARDEAEL 350
             LG      G+ E+A K + +   L  DE+ +
Sbjct: 313 AWLGEALFLSGQKEKACKTWRQGKALGDDESAI 345


>gi|427798565|gb|JAA64734.1| Putative tick transposon, partial [Rhipicephalus pulchellus]
          Length = 789

 Score = 63.9 bits (154), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 30/74 (40%), Positives = 48/74 (64%), Gaps = 1/74 (1%)

Query: 372 IKKKVSPRSQNITKNEKLAIKQLRENNDIIIRPADKGGKTVVMDKADYTQKMTSIL-NSN 430
           + K  S ++  +   EK A+++L++N DI++ PADKG  TV++D++DY  KMTS+L +  
Sbjct: 214 LSKLSSSKTDTLPIAEKTALRRLQQNKDIVVLPADKGNSTVILDRSDYVSKMTSLLQDET 273

Query: 431 DYEIIPGDPTKTIE 444
            Y  +  DPT  IE
Sbjct: 274 TYAKVSRDPTTKIE 287


>gi|255015886|ref|ZP_05288012.1| TPR domain-containing protein [Bacteroides sp. 2_1_7]
 gi|410104652|ref|ZP_11299564.1| pentatricopeptide repeat domain-containing protein [Parabacteroides
           sp. D25]
 gi|409233664|gb|EKN26498.1| pentatricopeptide repeat domain-containing protein [Parabacteroides
           sp. D25]
          Length = 321

 Score = 63.9 bits (154), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 50/189 (26%), Positives = 90/189 (47%), Gaps = 17/189 (8%)

Query: 101 RLLRATVYIFTSQSTKAIEDLTQLVEDTSVDPKIKVNAHIKRAVVHLHAASDFTKAFADL 160
           RL R  +     +  + I D   ++E   ++P   V A+   A     A +D   A ADL
Sbjct: 99  RLTRVNLLFMLDKDAEVITDCLHVIE---LEPSNHV-AYFMMAKAK-KATNDVFGAIADL 153

Query: 161 DEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNP---NFHVARAQRHFVVHK 217
             +  +  + AD+Y  R +I    GQ +EAL +++K I + P   + ++ R + H  +  
Sbjct: 154 TRSIALKEDFADAYLSRAEILLGLGQAKEALPDVEKAIGIVPEEESSYLLRGRIHMAL-- 211

Query: 218 MIVPGDRERVEQSLKEFRNFVDTHSNVVEACTLFAQVLVDQEDFDGAEEYFNRSIRVDPE 277
               GD   +E +  +F+  +D +    +AC L  Q+L++Q+ +D A  +F+ +I  +P 
Sbjct: 212 ----GD---IEAANSDFQQALDLNPFNEDACILSGQLLIEQKKYDEAIAFFDEAIETNPS 264

Query: 278 NASLYVHRA 286
            A  Y  R 
Sbjct: 265 FAKAYSERG 273


>gi|427737030|ref|YP_007056574.1| hypothetical protein Riv7116_3576 [Rivularia sp. PCC 7116]
 gi|427372071|gb|AFY56027.1| hypothetical protein Riv7116_3576 [Rivularia sp. PCC 7116]
          Length = 956

 Score = 63.9 bits (154), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 68/287 (23%), Positives = 129/287 (44%), Gaps = 22/287 (7%)

Query: 64  LLSKAKRAFEHEDYLTAIRHCTEEIESTSSNHTKALARLLRATVYIFTSQSTKAIEDLTQ 123
           L+ +  +  + EDY  A+    +       NH + L  L  A  ++   +  +A+E L Q
Sbjct: 10  LIEQGHQQLDKEDYAAALETFQQAAAEAPRNH-EVLYGLGLACYHL--ERYEQAVEYLNQ 66

Query: 124 LVEDTSVDPKIKVNAHIKRAVVHLHAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCL 183
            +E   V P   + A  +R +V+        +A AD  +A  +    AD +  RG     
Sbjct: 67  ALE---VKPNY-ILALARRGLVY-KKLKKTQQAEADFQQAISLTAEDADGWRGRGFALDE 121

Query: 184 FGQYEEALRNLDKTIALNPNFHVARAQRHFVVHKMIVPGDRERVEQSLKEFRNFV----D 239
            G+YE+A+   DK I + P+ + A   R +V+      G+ ER E ++  +   +    D
Sbjct: 122 LGRYEDAVAAYDKAIEIKPDDYYAWLNRGYVL------GNLERYEDAIDCYDKAIQIKPD 175

Query: 240 THSNVVEACTLFAQVLVDQEDFDGAEEYFNRSIRVDPENASLYVHRAMLMLQARGNVDEA 299
            + + V    +  + L   E+   A  +F+++I + P++   +++R  + L      ++A
Sbjct: 176 DYYSWVNMGAILCKKLQQNEN---AIAFFDKAIEIKPDDYDAWLYRG-IALDNLEKYEDA 231

Query: 300 IKLIEKAISIDKSCMFAYETLGTIEVQRGRLEEAVKCFNKALPLARD 346
           +   EKAI I      A+   G + +   R E+A+  +NKA+ +  D
Sbjct: 232 VTSFEKAIEIKPDDYDAWFDYGNVLLSLERYEDAIAAYNKAIEIKPD 278



 Score = 60.8 bits (146), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 67/298 (22%), Positives = 121/298 (40%), Gaps = 38/298 (12%)

Query: 75  EDYLTAIRHCTEEIESTSSNHTKALARLLRATVYIFTSQSTKAIEDLTQLVEDTSVDPKI 134
           E Y  A+ +  + +E    N+  ALAR  R  VY    ++ +A  D  Q +  T+ D   
Sbjct: 55  ERYEQAVEYLNQALE-VKPNYILALAR--RGLVYKKLKKTQQAEADFQQAISLTAED--- 108

Query: 135 KVNAHIKRAVVHLHAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNL 194
             +    R    L     +  A A  D+A ++ P+   ++  RG +     +YE+A+   
Sbjct: 109 -ADGWRGRGFA-LDELGRYEDAVAAYDKAIEIKPDDYYAWLNRGYVLGNLERYEDAIDCY 166

Query: 195 DKTIALNPNFHVARAQRHFVVHKM----------------IVPGDR-------------E 225
           DK I + P+ + +      ++ K                 I P D              E
Sbjct: 167 DKAIQIKPDDYYSWVNMGAILCKKLQQNENAIAFFDKAIEIKPDDYDAWLYRGIALDNLE 226

Query: 226 RVEQSLKEFRNFVDTHSNVVEACTLFAQVLVDQEDFDGAEEYFNRSIRVDPENASLYVHR 285
           + E ++  F   ++   +  +A   +  VL+  E ++ A   +N++I + P+N S  ++R
Sbjct: 227 KYEDAVTSFEKAIEIKPDDYDAWFDYGNVLLSLERYEDAIAAYNKAIEIKPDNYSALINR 286

Query: 286 AMLMLQARGNVDEAIKLIEKAISIDKSCMFAYETLGTIEVQRGRLEEAVKCFNKALPL 343
              +     N D A+   EKAI I      A+   G+      R + A+  F++AL L
Sbjct: 287 GSALFHLERNQD-AVGSFEKAIEIKPDNYIAWLNRGSALGSLARYKNAIASFDQALSL 343



 Score = 42.4 bits (98), Expect = 0.66,   Method: Compositional matrix adjust.
 Identities = 74/389 (19%), Positives = 144/389 (37%), Gaps = 72/389 (18%)

Query: 152 DFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQR 211
           D+  A     +A    P   +  Y  G       +YE+A+  L++ + + PN+ +A A+R
Sbjct: 22  DYAAALETFQQAAAEAPRNHEVLYGLGLACYHLERYEQAVEYLNQALEVKPNYILALARR 81

Query: 212 HFVVHKMIVPGDRERVEQSLKEFRNFVDTHSNVVEACTLFAQVLVDQEDFDGAEEYFNRS 271
             V  K+      ++ +Q                                  AE  F ++
Sbjct: 82  GLVYKKL------KKTQQ----------------------------------AEADFQQA 101

Query: 272 IRVDPENASLYVHRAMLMLQARGNVDEAIKLIEKAISIDKSCMFAYETLGTIEVQRGRLE 331
           I +  E+A  +  R    L   G  ++A+   +KAI I     +A+   G +     R E
Sbjct: 102 ISLTAEDADGWRGRG-FALDELGRYEDAVAAYDKAIEIKPDDYYAWLNRGYVLGNLERYE 160

Query: 332 EAVKCFNKALPLARDEAELSHIYSLRDAAIAQMKVCER-------YNIKKKVSPRSQNIT 384
           +A+ C++KA+ +  D+      YS  +      K  ++       ++   ++ P   +  
Sbjct: 161 DAIDCYDKAIQIKPDD-----YYSWVNMGAILCKKLQQNENAIAFFDKAIEIKPDDYDAW 215

Query: 385 KNEKLAIKQLRENNDII--------IRPADKGGKTVVMDKADYTQKMTSILNSNDYEIIP 436
               +A+  L +  D +        I+P D           DY   + S+     YE   
Sbjct: 216 LYRGIALDNLEKYEDAVTSFEKAIEIKPDDYDAWF------DYGNVLLSL---ERYEDAI 266

Query: 437 GDPTKTIE-ESEKYGNLENESGQKHAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCL 495
               K IE + + Y  L N             A    ++A ++ P+   ++  RG     
Sbjct: 267 AAYNKAIEIKPDNYSALINRGSALFHLERNQDAVGSFEKAIEIKPDNYIAWLNRGSALGS 326

Query: 496 FGQYEEALRNLDKTIALNPNFHVARAQRH 524
             +Y+ A+ + D+ ++L  N+   +A R+
Sbjct: 327 LARYKNAIASFDQALSLT-NYQEWKAWRN 354


>gi|428212875|ref|YP_007086019.1| hypothetical protein Oscil6304_2480 [Oscillatoria acuminata PCC
           6304]
 gi|428001256|gb|AFY82099.1| tetratricopeptide repeat protein [Oscillatoria acuminata PCC 6304]
          Length = 692

 Score = 63.9 bits (154), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 59/199 (29%), Positives = 89/199 (44%), Gaps = 9/199 (4%)

Query: 170 VADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQRHFVVHKMIVPGDRERVEQ 229
           +A+ Y   G      G  E+A+  L K I L PN   A      ++H++    DR+R   
Sbjct: 79  LAEYYAALGNSLIQMGAIEKAIACLGKQIILQPNSAEAYCTLGILLHEV---EDRKR--- 132

Query: 230 SLKEFRNFVDTHSNVVEACTLFAQVLVDQEDFDGAEEYFNRSIRVDPENASLYVHRAMLM 289
           +   F   +    N+ EA    A +L +      A     ++I + P  A LY +   L+
Sbjct: 133 AFDCFTTAIQLKPNLAEAYGNLANLLAELNQVSEAVNCLKKAIILKPGLAELYGNLGNLL 192

Query: 290 LQARGNVDEAIKLIEKAISIDKSCMFAYETLGTIEVQRGRLEEAVKCFNKALPLARDEAE 349
            + +G  +E+I  + KAI I      AY  LG +  Q  +LEEAV CF KA  L  D A 
Sbjct: 193 CE-QGKFNESIFYLRKAIEIKPDYANAYHKLGQVFQQSNQLEEAVACFQKASELQPDFA- 250

Query: 350 LSHIYSLRDAAIAQMKVCE 368
            +   +L  +   Q K+CE
Sbjct: 251 -AAYGNLGMSLQLQGKLCE 268



 Score = 52.8 bits (125), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 46/202 (22%), Positives = 78/202 (38%), Gaps = 41/202 (20%)

Query: 145 VHLHAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNF 204
           + LH   D  +AF     A ++ PN+A++Y     +     Q  EA+  L K I L P  
Sbjct: 122 ILLHEVEDRKRAFDCFTTAIQLKPNLAEAYGNLANLLAELNQVSEAVNCLKKAIILKPGL 181

Query: 205 HVARAQRHFVVHKMIVPGDRERVEQSLKEFRNFVDTHSNVVEACTLFAQVLVDQEDFDGA 264
                                             + + N+         +L +Q  F+ +
Sbjct: 182 ---------------------------------AELYGNL-------GNLLCEQGKFNES 201

Query: 265 EEYFNRSIRVDPENASLYVHRAMLMLQARGNVDEAIKLIEKAISIDKSCMFAYETLGTIE 324
             Y  ++I + P+ A+ Y H+   + Q    ++EA+   +KA  +      AY  LG   
Sbjct: 202 IFYLRKAIEIKPDYANAY-HKLGQVFQQSNQLEEAVACFQKASELQPDFAAAYGNLGMSL 260

Query: 325 VQRGRLEEAVKCFNKALPLARD 346
             +G+L EA+  F+KA  L  D
Sbjct: 261 QLQGKLCEAIAAFHKAFQLQPD 282



 Score = 47.0 bits (110), Expect = 0.029,   Method: Compositional matrix adjust.
 Identities = 45/189 (23%), Positives = 81/189 (42%), Gaps = 6/189 (3%)

Query: 167 DPNVADSYYQRGQIYCLFGQYEEALRNLDKTIAL---NPNFHVARAQRHFVVHKMIVPGD 223
            P+ A +Y   G I  L G+ E A+R     I L     N  +  A+ +  +   ++   
Sbjct: 35  QPDFAPTYKLLGNILQLSGKQEAAIRAYQYGIYLFEKPSNSPIQLAEYYAALGNSLI--Q 92

Query: 224 RERVEQSLKEFRNFVDTHSNVVEACTLFAQVLVDQEDFDGAEEYFNRSIRVDPENASLYV 283
              +E+++      +    N  EA      +L + ED   A + F  +I++ P  A  Y 
Sbjct: 93  MGAIEKAIACLGKQIILQPNSAEAYCTLGILLHEVEDRKRAFDCFTTAIQLKPNLAEAYG 152

Query: 284 HRAMLMLQARGNVDEAIKLIEKAISIDKSCMFAYETLGTIEVQRGRLEEAVKCFNKALPL 343
           + A L+ +    V EA+  ++KAI +       Y  LG +  ++G+  E++    KA+ +
Sbjct: 153 NLANLLAELN-QVSEAVNCLKKAIILKPGLAELYGNLGNLLCEQGKFNESIFYLRKAIEI 211

Query: 344 ARDEAELSH 352
             D A   H
Sbjct: 212 KPDYANAYH 220


>gi|365883408|ref|ZP_09422556.1| conserved exported hypothetical protein [Bradyrhizobium sp. ORS
           375]
 gi|365288132|emb|CCD95087.1| conserved exported hypothetical protein [Bradyrhizobium sp. ORS
           375]
          Length = 460

 Score = 63.9 bits (154), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 71/283 (25%), Positives = 121/283 (42%), Gaps = 16/283 (5%)

Query: 268 FNRSIRVDPENASLYVHRAMLMLQARGNVDEAIKLIEKAISIDKSCMFAYETLGTIEVQR 327
            +R+I +D +NA  Y  R  LM +A G+  +A   +  AIS+D     AYE  G +   +
Sbjct: 93  LDRAIALDGKNARAYRLRGDLMREAGGDAGKATADLSMAISLDPDDAEAYELRGVVYTGQ 152

Query: 328 GRLEEAVKCFNKALPLARDEAELSHIYSLRDAAI----AQMKVCERYNIKKKVSPRSQNI 383
            RL+ A+  +++A+ L  D A+    Y+ R  A        K  + YN   ++ P     
Sbjct: 153 RRLDRALADYDQAIRLKPDYAQ---AYADRGVAFYLRGDNEKAVQDYNEAIRLDPDRPRT 209

Query: 384 TKNEKLAIKQLRENNDIIIRPADKGGKTVVMDKAD--YTQKMTSILNSNDYEIIPGDPTK 441
             N   A K+L + +  +   AD         K    +  +  +  +  DY+    D  +
Sbjct: 210 FTNRAAAYKKLGQMDKAL---ADDHEAIRRDPKVPEYFDNRGLTYQSLGDYDKAIADYDQ 266

Query: 442 TIEESEKYGNLENESGQKHAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEE 501
            I+   K   L N        ++   A +D D A ++DPN A +Y  R  ++   G+  +
Sbjct: 267 AIKLQPKPNFLTNRGDSHQFKNELGAALSDYDAALRLDPNFALAYNNRAVLFRKMGERAK 326

Query: 502 ALRNLDKTIALNPNFHVARAQRHFVWTSTLAELMAFSDEFMIP 544
           AL + +  + L+P    A + R  +    LAE+  F  E   P
Sbjct: 327 ALADYEAALRLDPGNDNAASGRRVM----LAEIKKFGAEPPRP 365



 Score = 60.5 bits (145), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 67/235 (28%), Positives = 112/235 (47%), Gaps = 21/235 (8%)

Query: 81  IRHCTEEIE-STSSNHTKALARLLRATVYIFTSQS-TKAIEDLTQLVEDTSVDPKIKVNA 138
           I  C+  IE +++S   +++A + RA  +  T+   T+A+ DL + +   ++D K    A
Sbjct: 51  ISACSAAIEQASASPRDQSIALVARADAHARTTGGMTQALRDLDRAI---ALDGK-NARA 106

Query: 139 HIKRAVVHLHAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTI 198
           +  R  +   A  D  KA ADL  A  +DP+ A++Y  RG +Y    + + AL + D+ I
Sbjct: 107 YRLRGDLMREAGGDAGKATADLSMAISLDPDDAEAYELRGVVYTGQRRLDRALADYDQAI 166

Query: 199 ALNPNFHVARAQRHFVVHKMIVPGDRERVEQSLKE-FRNFVD---THSNVVEACTLFAQV 254
            L P++  A A R    +   + GD E+  Q   E  R   D   T +N   A     Q+
Sbjct: 167 RLKPDYAQAYADRGVAFY---LRGDNEKAVQDYNEAIRLDPDRPRTFTNRAAAYKKLGQM 223

Query: 255 LVDQEDFDGAEEYFNRSIRVDPENASLYVHRAMLMLQARGNVDEAIKLIEKAISI 309
                  D A    + +IR DP+    + +R  L  Q+ G+ D+AI   ++AI +
Sbjct: 224 -------DKALADDHEAIRRDPKVPEYFDNRG-LTYQSLGDYDKAIADYDQAIKL 270



 Score = 55.8 bits (133), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 52/233 (22%), Positives = 105/233 (45%), Gaps = 8/233 (3%)

Query: 112 SQSTKAIEDLTQLVEDTSVDPKIKVNAHIKRAVVHLHAASDFTKAFADLDEAEKVDPNVA 171
           +Q ++ I   +  +E  S  P+ +  A + RA  H       T+A  DLD A  +D   A
Sbjct: 45  AQPSQLISACSAAIEQASASPRDQSIALVARADAHARTTGGMTQALRDLDRAIALDGKNA 104

Query: 172 DSYYQRGQIYC-LFGQYEEALRNLDKTIALNPNFHVARAQRHFVVHKMIVPGDRERVEQS 230
            +Y  RG +     G   +A  +L   I+L+P+   A     + +  ++  G R R++++
Sbjct: 105 RAYRLRGDLMREAGGDAGKATADLSMAISLDPDDAEA-----YELRGVVYTGQR-RLDRA 158

Query: 231 LKEFRNFVDTHSNVVEACTLFAQVLVDQEDFDGAEEYFNRSIRVDPENASLYVHRAMLML 290
           L ++   +    +  +A          + D + A + +N +IR+DP+    + +RA    
Sbjct: 159 LADYDQAIRLKPDYAQAYADRGVAFYLRGDNEKAVQDYNEAIRLDPDRPRTFTNRAA-AY 217

Query: 291 QARGNVDEAIKLIEKAISIDKSCMFAYETLGTIEVQRGRLEEAVKCFNKALPL 343
           +  G +D+A+    +AI  D      ++  G      G  ++A+  +++A+ L
Sbjct: 218 KKLGQMDKALADDHEAIRRDPKVPEYFDNRGLTYQSLGDYDKAIADYDQAIKL 270


>gi|384215071|ref|YP_005606236.1| hypothetical protein BJ6T_13600 [Bradyrhizobium japonicum USDA 6]
 gi|354953969|dbj|BAL06648.1| hypothetical protein BJ6T_13600 [Bradyrhizobium japonicum USDA 6]
          Length = 461

 Score = 63.9 bits (154), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 88/340 (25%), Positives = 148/340 (43%), Gaps = 41/340 (12%)

Query: 81  IRHCTEEIESTS-SNHTKALARLLRATVYIFTSQSTKAIEDLTQLVEDTSVDPKIKVNAH 139
           I  C   I+ T+ S+  +A A L+RA     TS        LTQ + D  +D  I +N  
Sbjct: 53  ITACGAIIDQTANSSADRAAALLVRADANARTSGG------LTQALRD--IDRAIALNGR 104

Query: 140 IKRAV-----VHLHAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNL 194
             +A      +   A  D  +A ADL +A ++DP  A++Y  RG +Y    + + AL + 
Sbjct: 105 NAKAWRLRGDLLREAGGDLNRAAADLSKAIELDPQDAEAYELRGVVYTNQRRLDRALADY 164

Query: 195 DKTIALNPNFHVARAQRHFVVHKMIVPGDRERVEQSLKE-FR---NFVDTHSNVVEACTL 250
           D+ I L P+   A + R    +   + GD E+  + L E  R   N    ++N   A   
Sbjct: 165 DQAIKLKPDDAQAWSDRGVNYY---LGGDNEKAIRDLSEALRLDPNRPRAYTNRGAAYKK 221

Query: 251 FAQVLVDQEDFDGAEEYFNRSIRVDPENASLYVHRAMLMLQARGNVDEAIKLIEKAISID 310
             Q  +D+   D  E     +IR+DP+    Y +R  L+L A G  D+AI   ++A+ + 
Sbjct: 222 LGQ--LDKAVADDGE-----AIRLDPKVPEYYDNRG-LVLAAMGEYDKAIADYDQALRLA 273

Query: 311 KSCMFAYETLGTIEVQRGRLEEAVKCFNKALPLARDEAELSHIYSLRDAAIAQMKVCER- 369
               F +   G     +G L  A+  +  AL +   +   +  Y+ R  A+   K+ ER 
Sbjct: 274 PRPNF-FTNRGDSHQLKGELGAALSDYEAALKI---DPNFAQTYNNR--AVLYKKMGERK 327

Query: 370 -----YNIKKKVSPRSQNITKNEKLAIKQLRENNDIIIRP 404
                Y    K+ P ++N     +  + ++ +     +RP
Sbjct: 328 KALADYETALKLDPGNENAANGRRSMVAEIAKFGAEPLRP 367



 Score = 60.8 bits (146), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 66/285 (23%), Positives = 122/285 (42%), Gaps = 20/285 (7%)

Query: 268 FNRSIRVDPENASLYVHRAMLMLQARGNVDEAIKLIEKAISIDKSCMFAYETLGTIEVQR 327
            +R+I ++  NA  +  R  L+ +A G+++ A   + KAI +D     AYE  G +   +
Sbjct: 95  IDRAIALNGRNAKAWRLRGDLLREAGGDLNRAAADLSKAIELDPQDAEAYELRGVVYTNQ 154

Query: 328 GRLEEAVKCFNKALPLARDEAELS-----HIYSLRDAAIAQMKVCERYNIKKKVSPRSQN 382
            RL+ A+  +++A+ L  D+A+       + Y   D   A   + E      ++ P    
Sbjct: 155 RRLDRALADYDQAIKLKPDDAQAWSDRGVNYYLGGDNEKAIRDLSEAL----RLDPNRPR 210

Query: 383 ITKNEKLAIKQLRENNDIIIRPADKGGKTVVMDKAD--YTQKMTSILNSNDYEIIPGDPT 440
              N   A K+L + +  +   AD G    +  K    Y  +   +    +Y+    D  
Sbjct: 211 AYTNRGAAYKKLGQLDKAV---ADDGEAIRLDPKVPEYYDNRGLVLAAMGEYDKAIADYD 267

Query: 441 KTIEESEKYGNLENESGQKHAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYE 500
           + +  + +     N         +   A +D + A K+DPN A +Y  R  +Y   G+ +
Sbjct: 268 QALRLAPRPNFFTNRGDSHQLKGELGAALSDYEAALKIDPNFAQTYNNRAVLYKKMGERK 327

Query: 501 EALRNLDKTIALNP-NFHVARAQRHFVWTSTLAELMAFSDEFMIP 544
           +AL + +  + L+P N + A  +R  V     AE+  F  E + P
Sbjct: 328 KALADYETALKLDPGNENAANGRRSMV-----AEIAKFGAEPLRP 367


>gi|118359319|ref|XP_001012899.1| TPR Domain containing protein [Tetrahymena thermophila]
 gi|89294666|gb|EAR92654.1| TPR Domain containing protein [Tetrahymena thermophila SB210]
          Length = 1122

 Score = 63.9 bits (154), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 58/245 (23%), Positives = 113/245 (46%), Gaps = 18/245 (7%)

Query: 100 ARLLRATVYIFTSQSTKAIEDLTQLVEDTSVDPKIKVNAHIKRAVVHLHAASDFTKAFAD 159
           A + +   Y   +Q  +AI+   + +E   VDP    +AH   A+++ +      ++   
Sbjct: 531 AYVNQGLCYQNLNQQDEAIQQYQKAIE---VDPNFS-DAHYNLALIY-YDKKLMKESIEQ 585

Query: 160 LDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQRHFVVHKMI 219
              A  V P+  D+YY  G  Y    QY+EA+++    I +  N++ A      + +  +
Sbjct: 586 YQIAIDVKPSSYDAYYNMGIAYHSLQQYDEAIQSYKNAIKIKANYNNA------IYNLGV 639

Query: 220 VPGDRERVEQSLKEFRNFVDTHSNVVEACTLFAQVLVDQEDFDGAEEYFNRSIRVDPENA 279
              D  + E+SLK +    D + + V+ C            +  A +++ R+I++DP   
Sbjct: 640 TYYDLGQYEESLKYYSQAYDLNPDFVDICYSTGLSYEKLNKYPEALDWYKRAIKLDP--- 696

Query: 280 SLYV---HRAMLMLQARGNVDEAIKLIEKAISIDKSCMFAYETLGTIEVQRGRLEEAVKC 336
            LY+    R + +    G  +EAI+ + K I + +     Y  LG I+ +  +L+EA++ 
Sbjct: 697 -LYMDPFKRLIDIYVKEGRQEEAIEFLTKGIGLAEKNEVQYFYLGVIKFKELKLDEAMQF 755

Query: 337 FNKAL 341
           F +A+
Sbjct: 756 FKQAI 760



 Score = 52.4 bits (124), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 63/265 (23%), Positives = 111/265 (41%), Gaps = 49/265 (18%)

Query: 137 NAHIKRAVVHLHAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDK 196
           +AH    + + +   ++ +A  +   A+++ PN +D  Y  G  Y    + EEA +   K
Sbjct: 768 DAHFNLGLCY-YKQKNYDEAIREYLIADELKPNQSDLSYNLGITYYYRKELEEAKKWYLK 826

Query: 197 TIALNPNFHVARAQRHFVVHKMIVPGDRERVEQSLKEFRNFVDTHSNVVEACTLFAQVLV 256
           +I LNPN+  A    +F +   IV  + +  E++++ ++   +  S   +AC        
Sbjct: 827 SIQLNPNYCDA----YFNLG--IVYYEEQNYEEAIQMYKKSFELDSKFADAC-------- 872

Query: 257 DQEDFDGAEEYFNRSIRVDPENASLYVHRAMLMLQARGNVDEAIKLIEKAISIDKSCMFA 316
                      +N SI  D  N S                ++ I   EKAI ID  C+  
Sbjct: 873 -----------YNTSITYDKLNDS----------------EQCIYWSEKAIEIDPKCIDT 905

Query: 317 YETLGTIEVQRGRLEEAVKCFNKALPLARDEA----ELSHIYSLRDAAIAQMKVCERYNI 372
           Y+ LG I  +    E+A+K + K + L  D+      L   Y L       ++V E+   
Sbjct: 906 YKFLGQIFSKLDNNEKALKIYLKLVDLLPDDENALYNLGITYQLLHMYNEAIEVFEK--- 962

Query: 373 KKKVSPRSQNITKNEKLAIKQLREN 397
             K++P   ++  N  L   +L+EN
Sbjct: 963 GYKINPNQCDLLYNLGLIYYELKEN 987



 Score = 52.0 bits (123), Expect = 9e-04,   Method: Compositional matrix adjust.
 Identities = 58/255 (22%), Positives = 111/255 (43%), Gaps = 20/255 (7%)

Query: 92  SSNHTKALARLLRATVYIFTSQSTKAIEDLTQLVEDTSVDPKIKVNAHIKRAVVHLHAAS 151
           + N+++A   L     Y    +  +AI +L Q ++    D     ++H K   ++     
Sbjct: 389 NKNYSRAYYYL--GCEYFMQGKQEQAILNLKQSIKLNKYD----ADSHFKIGYIYYEKGE 442

Query: 152 DFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQR 211
           D   A     +A K++P    +Y   G IY    + E+A+   DK I LNPNF       
Sbjct: 443 D-DIAINYFKQAIKINPYYEQAYNMIGNIYNYQQKQEDAIIWYDKAIQLNPNFGDNYNNL 501

Query: 212 HFVVHKMIVPGDRERVEQSLKEFRNFVDTHSNVVEACT---LFAQVLVDQEDFDGAEEYF 268
               +      ++++ +Q+L  F+   +   N+V A     L  Q L  Q   D A + +
Sbjct: 502 GLQYY------NQKQFDQALWYFQKSAEKSKNLVNAYVNQGLCYQNLNQQ---DEAIQQY 552

Query: 269 NRSIRVDPENASLYVHRAMLMLQARGNVDEAIKLIEKAISIDKSCMFAYETLGTIEVQRG 328
            ++I VDP  +  + + A++    +  + E+I+  + AI +  S   AY  +G       
Sbjct: 553 QKAIEVDPNFSDAHYNLALIYYDKKL-MKESIEQYQIAIDVKPSSYDAYYNMGIAYHSLQ 611

Query: 329 RLEEAVKCFNKALPL 343
           + +EA++ +  A+ +
Sbjct: 612 QYDEAIQSYKNAIKI 626



 Score = 49.7 bits (117), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 81/364 (22%), Positives = 158/364 (43%), Gaps = 64/364 (17%)

Query: 165 KVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQRHFVVHKMIVPGDR 224
           +++PN  ++Y   G  Y + G    +  +  K+I LN N+  +RA  +++  +  + G +
Sbjct: 353 EINPNSYETYSSIGYCYYIIGDTINSEESFKKSIELNKNY--SRA-YYYLGCEYFMQGKQ 409

Query: 225 ER----VEQSLKEFRNFVDTHSNVVEACTLFAQVLVDQEDFDGAEEYFNRSIRVDPENAS 280
           E+    ++QS+K  +   D+H  +         +  ++ + D A  YF ++I+++P    
Sbjct: 410 EQAILNLKQSIKLNKYDADSHFKI-------GYIYYEKGEDDIAINYFKQAIKINP---- 458

Query: 281 LYVHRAMLMLQARGNV-------DEAIKLIEKAISIDKSCMFAYETLGTIEVQRGRLEEA 333
            Y  +A  M+   GN+       ++AI   +KAI ++ +    Y  LG     + + ++A
Sbjct: 459 -YYEQAYNMI---GNIYNYQQKQEDAIIWYDKAIQLNPNFGDNYNNLGLQYYNQKQFDQA 514

Query: 334 VKCFNKALPLARDEAELSHIYSLRDAAIAQMKVCERYNIKKKVSPRSQNITKNEKLAIKQ 393
           +  F K+       AE S   +L +A + Q  +C             QN+ + ++ AI+Q
Sbjct: 515 LWYFQKS-------AEKSK--NLVNAYVNQ-GLC------------YQNLNQQDE-AIQQ 551

Query: 394 LRENNDIIIRPADKGGKTVVMDKADYTQKMTSILNSNDYEI-IPGDPTKTIEESEKYGNL 452
            ++  ++    +D      ++    Y  K     +   Y+I I   P+        Y   
Sbjct: 552 YQKAIEVDPNFSDAHYNLALI----YYDKKLMKESIEQYQIAIDVKPS-------SYDAY 600

Query: 453 ENESGQKHAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIAL 512
            N     H+   + +A      A K+  N  ++ Y  G  Y   GQYEE+L+   +   L
Sbjct: 601 YNMGIAYHSLQQYDEAIQSYKNAIKIKANYNNAIYNLGVTYYDLGQYEESLKYYSQAYDL 660

Query: 513 NPNF 516
           NP+F
Sbjct: 661 NPDF 664



 Score = 47.8 bits (112), Expect = 0.016,   Method: Compositional matrix adjust.
 Identities = 72/351 (20%), Positives = 146/351 (41%), Gaps = 42/351 (11%)

Query: 165 KVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQRHFVVHKMIVPGDR 224
           +++ N + +YY  G  Y + G+ E+A+ NL ++I LN       A  HF +  +      
Sbjct: 387 ELNKNYSRAYYYLGCEYFMQGKQEQAILNLKQSIKLNK----YDADSHFKIGYIYYEKGE 442

Query: 225 ERVEQSLKEFRNFVDTHSNVVEACTLFAQVLVDQEDFDGAEEYFNRSIRVDPENASLYVH 284
           + +  ++  F+  +  +    +A  +   +   Q+  + A  +++++I+++P     Y +
Sbjct: 443 DDI--AINYFKQAIKINPYYEQAYNMIGNIYNYQQKQEDAIIWYDKAIQLNPNFGDNY-N 499

Query: 285 RAMLMLQARGNVDEAIKLIEKAISIDKSCMFAYETLGTIEVQRGRLEEAVKCFNKALPLA 344
              L    +   D+A+   +K+    K+ + AY   G       + +EA++ + KA+ + 
Sbjct: 500 NLGLQYYNQKQFDQALWYFQKSAEKSKNLVNAYVNQGLCYQNLNQQDEAIQQYQKAIEVD 559

Query: 345 RDEAELSHIYSLRDAAIAQMK-VCERYNIKKKVSPRSQNITKNEKLAIKQLRENNDIIIR 403
            + ++  +  +L       MK   E+Y I   V P S +   N  +A   L++ ++ I  
Sbjct: 560 PNFSDAHYNLALIYYDKKLMKESIEQYQIAIDVKPSSYDAYYNMGIAYHSLQQYDEAI-- 617

Query: 404 PADKGGKTVVMDKADYTQKMTSILNSNDYEIIPGDPTKTIEESEKYGNLENESGQKHAAS 463
              +  K  +  KA+Y   + + L    Y++         EES KY              
Sbjct: 618 ---QSYKNAIKIKANYNNAIYN-LGVTYYDL------GQYEESLKY-------------- 653

Query: 464 DFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNP 514
                     +A  ++P+  D  Y  G  Y    +Y EAL    + I L+P
Sbjct: 654 --------YSQAYDLNPDFVDICYSTGLSYEKLNKYPEALDWYKRAIKLDP 696



 Score = 40.8 bits (94), Expect = 1.9,   Method: Compositional matrix adjust.
 Identities = 60/268 (22%), Positives = 113/268 (42%), Gaps = 40/268 (14%)

Query: 252 AQVLVDQEDFDGAEEYFNRSIRVDPENASLY--VHRAMLMLQARGNVDEAIKLIEKAISI 309
           A    DQ+    A E F + I ++P +   Y  +     ++    N +E+ K   K+I +
Sbjct: 332 AYSFFDQKKESEAIEKFKKVIEINPNSYETYSSIGYCYYIIGDTINSEESFK---KSIEL 388

Query: 310 DKSCMFAYETLGTIEVQRGRLEEAVKCFNKALPLARDEAELSHIYSLRDAAIAQMKVCER 369
           +K+   AY  LG     +G+ E+A+    +++ L + +A+ SH            K+   
Sbjct: 389 NKNYSRAYYYLGCEYFMQGKQEQAILNLKQSIKLNKYDAD-SH-----------FKIGYI 436

Query: 370 YNIKKKVSPRSQNITKNEKLAIKQLRENNDIIIRPADKGGKTVVMDKADYTQKMTSILNS 429
           Y  K +           + +AI   ++   I I P  +    ++ +  +Y QK       
Sbjct: 437 YYEKGE-----------DDIAINYFKQA--IKINPYYEQAYNMIGNIYNYQQKQED---- 479

Query: 430 NDYEIIPGDPTKTIEESEKYGNLENESG-QKHAASDFTKAFADLDEAEKVDPNVADSYYQ 488
               II  D  K I+ +  +G+  N  G Q +    F +A     ++ +   N+ ++Y  
Sbjct: 480 ---AIIWYD--KAIQLNPNFGDNYNNLGLQYYNQKQFDQALWYFQKSAEKSKNLVNAYVN 534

Query: 489 RGQIYCLFGQYEEALRNLDKTIALNPNF 516
           +G  Y    Q +EA++   K I ++PNF
Sbjct: 535 QGLCYQNLNQQDEAIQQYQKAIEVDPNF 562


>gi|406880002|gb|EKD28450.1| hypothetical protein ACD_79C00296G0007 [uncultured bacterium]
          Length = 196

 Score = 63.9 bits (154), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 39/143 (27%), Positives = 72/143 (50%), Gaps = 12/143 (8%)

Query: 149 AASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNP---NFH 205
           A  DF  AF    +A ++DP   D+YY+ G ++    +Y++A++N ++ I  NP   N+ 
Sbjct: 40  AKGDFESAFKYFSKAIELDPKNDDAYYELGNLFLQQSKYDKAIKNYNEAIKQNPNNANYF 99

Query: 206 VARAQRHFVVHKMIVPGDRERVEQSLKEFRNFVDTHSNVVEACTLFAQVLVDQEDFDGAE 265
           + R +         + GD      +L ++ + +  +S++ EA      +  ++ DFDGA 
Sbjct: 100 IKRGKAK------KLNGDS---NSALSDYESALKINSDLAEAWYNIGWIKYNKMDFDGAL 150

Query: 266 EYFNRSIRVDPENASLYVHRAML 288
              N+SI ++PE A  Y  R  +
Sbjct: 151 SALNKSIEINPEYAHAYNLRGWV 173



 Score = 44.7 bits (104), Expect = 0.14,   Method: Compositional matrix adjust.
 Identities = 29/93 (31%), Positives = 48/93 (51%), Gaps = 7/93 (7%)

Query: 423 MTSILNSNDYEIIPGDPTKTIEESEKYGNLENESGQKHAASDFTKAFADLDEAEKVDPNV 482
            T IL++N   I   D T +   SE +    N   +  A  DF  AF    +A ++DP  
Sbjct: 9   FTLILSTN---IFAEDSTNSTSASENF----NFGIKAVAKGDFESAFKYFSKAIELDPKN 61

Query: 483 ADSYYQRGQIYCLFGQYEEALRNLDKTIALNPN 515
            D+YY+ G ++    +Y++A++N ++ I  NPN
Sbjct: 62  DDAYYELGNLFLQQSKYDKAIKNYNEAIKQNPN 94



 Score = 41.6 bits (96), Expect = 0.99,   Method: Compositional matrix adjust.
 Identities = 35/140 (25%), Positives = 57/140 (40%), Gaps = 36/140 (25%)

Query: 251 FAQVLVDQEDFDGAEEYFNRSIRVDPENASLYVHRAMLMLQ------ARGNVDEAIKL-- 302
           F    V + DF+ A +YF+++I +DP+N   Y     L LQ      A  N +EAIK   
Sbjct: 34  FGIKAVAKGDFESAFKYFSKAIELDPKNDDAYYELGNLFLQQSKYDKAIKNYNEAIKQNP 93

Query: 303 -------------------------IEKAISIDKSCMFAYETLGTIEVQRGRLEEAVKCF 337
                                     E A+ I+     A+  +G I+  +   + A+   
Sbjct: 94  NNANYFIKRGKAKKLNGDSNSALSDYESALKINSDLAEAWYNIGWIKYNKMDFDGALSAL 153

Query: 338 NKALPLARDEAELSHIYSLR 357
           NK++ +     E +H Y+LR
Sbjct: 154 NKSIEI---NPEYAHAYNLR 170


>gi|196012447|ref|XP_002116086.1| hypothetical protein TRIADDRAFT_59997 [Trichoplax adhaerens]
 gi|190581409|gb|EDV21486.1| hypothetical protein TRIADDRAFT_59997 [Trichoplax adhaerens]
          Length = 927

 Score = 63.9 bits (154), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 88/396 (22%), Positives = 167/396 (42%), Gaps = 39/396 (9%)

Query: 149 AASDFTKAFADLDE-AEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIAL------- 200
           A  DF K+     E +E  D N+++SY   G IY   G+Y++AL   +K++ +       
Sbjct: 74  ALKDFNKSLGIKSEWSENEDINMSESYLNIGSIYDKQGKYDDALSMYNKSLKIQLTQLGD 133

Query: 201 -NPNFHVARAQRHFVV-HKMIVPGDRERVEQSLK-EFRNFVDTHSNVVEACTLFAQVLVD 257
            +P   V  +    V  H+           +SLK +     D H ++    T   QV  D
Sbjct: 134 NHPKIAVTYSNIGQVYNHQGKYDDALSMYNKSLKIQLTQLGDNHPSIAVTYTNIGQVYND 193

Query: 258 QEDFDGAEEYFNRSIRVD--------PENASLYVHRAMLMLQARGNVDEAIKLIEKAISI 309
           Q  +D A   +N+S+++         P  A+ Y H    + + +   D+A+ +  K++ I
Sbjct: 194 QGKYDDALSMYNKSLKIQLTQLGDNHPSIATTY-HNIGSVYRDQSKYDDALSMYNKSLKI 252

Query: 310 D--------KSCMFAYETLGTIEVQRGRLEEAVKCFNKALPLARDEAELSHIYSLRDAAI 361
                     S    Y  +G +   +G+ ++A+  +NK+L +   +   +H       A 
Sbjct: 253 QLTQLGDNHPSIAVTYTNIGQVYNDQGKYDDALSMYNKSLKIQLTQLGDNH----PSIAT 308

Query: 362 AQMKVCERYNIKKKVSPRSQNITKNEKLAIKQLRENN-DIIIRPADKGGKTVVMDKADYT 420
               +   Y  + K         K+ K+ + QL +N+  I     + GG  V  D+  Y 
Sbjct: 309 TYHNIGGVYRDQGKYDDALSMYNKSLKIQLTQLGDNHPSIATTYHNIGG--VYRDQGKYD 366

Query: 421 QKMTSILNSNDYEIIP-GDPTKTIEES-EKYGNLENESGQ-KHAASDFTKAFA-DLDEAE 476
             ++    S   E+   GD   +I  +    G++  + G+   A S + K+    L +  
Sbjct: 367 DALSMYNKSLKIELTQLGDNHPSIATTYHNIGSVYRDQGKYDDALSMYNKSLKIQLTQLG 426

Query: 477 KVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIAL 512
              P++A +Y+  G +Y   G+Y++AL   +K++ +
Sbjct: 427 DNHPSIATTYHSIGGVYNRQGKYDDALSMYNKSLKI 462



 Score = 57.4 bits (137), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 81/391 (20%), Positives = 163/391 (41%), Gaps = 45/391 (11%)

Query: 168 PNVADSYYQRGQIYCLFGQYEEALRNLDKTIALN----PNFHVARAQRHFVVHKMIVPGD 223
           P++A +Y+  G +Y   G+Y++AL   +K++ +      + H + A  +  +    V  D
Sbjct: 346 PSIATTYHNIGGVYRDQGKYDDALSMYNKSLKIELTQLGDNHPSIATTYHNIGS--VYRD 403

Query: 224 RERVEQSLK--------EFRNFVDTHSNVVEACTLFAQVLVDQEDFDGAEEYFNRSIRVD 275
           + + + +L         +     D H ++         V   Q  +D A   +N+S+++ 
Sbjct: 404 QGKYDDALSMYNKSLKIQLTQLGDNHPSIATTYHSIGGVYNRQGKYDDALSMYNKSLKIQ 463

Query: 276 --------PENASLYVHRAMLMLQARGNVDEAIKLIEKAISID--------KSCMFAYET 319
                   P  A+ Y H    +   +G  D+A+ +  K++ I          S    Y  
Sbjct: 464 LTQLGDNHPSIAATY-HNIGGVYNDQGKYDDALSMYNKSLKIQLTQLGDNHPSIAATYHN 522

Query: 320 LGTIEVQRGRLEEAVKCFNKALPLARDEAELSHIYSLRDAAIAQMKVCERYNIKKKVSPR 379
           +G +   +G+ ++A+  +NK+L +   +   +H       A     +   YN + K    
Sbjct: 523 IGGVYNDQGKYDDALSMYNKSLKIQLTQFGDNH----PSIAATYHSIGGVYNDQGKYDDA 578

Query: 380 SQNITKNEKLAIKQLRENN-DIIIRPADKGGKTVVMDKADYTQKMTSILNSNDYEIIP-G 437
                K+ K+ + QL +N+  I     + GG  V  D+  Y   ++    S   ++   G
Sbjct: 579 LSMYNKSLKIKLTQLGDNHPSIATTYHNIGG--VYRDQGKYDDALSMYNKSLKIDLTQLG 636

Query: 438 DPTKTIEES-EKYGNLENESGQ-KHAASDFTKAFA-DLDEAEKVDPNVADSYYQRGQIYC 494
           D   +I  +    G + N  G+   A S + K+    L +     P++A +Y+  G +Y 
Sbjct: 637 DNHPSIAATYHSIGGVYNHQGKYDDALSMYNKSLKIQLTQLGDNHPSIASTYHSIGGVYR 696

Query: 495 LFGQYEEALRNLDKTIALNPNFHVARAQRHF 525
             G+Y++AL  L+K++ +   F V   + H 
Sbjct: 697 DQGKYDDALSMLNKSLQI---FLVTLGENHL 724


>gi|390949283|ref|YP_006413042.1| putative O-linked N-acetylglucosamine transferase, SPINDLY family
           [Thiocystis violascens DSM 198]
 gi|390425852|gb|AFL72917.1| putative O-linked N-acetylglucosamine transferase, SPINDLY family
           [Thiocystis violascens DSM 198]
          Length = 972

 Score = 63.5 bits (153), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 54/224 (24%), Positives = 101/224 (45%), Gaps = 29/224 (12%)

Query: 155 KAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPN----------- 203
           +A A L  A + +P+ A     +G I    G++EEA  +  + +A++P            
Sbjct: 309 EALASLSLAARSEPDQAGVLSDQGNILRELGRFEEARDSYRRALAIDPANALAHTNLGNL 368

Query: 204 ----FHVARAQRHFVVHKMIVPG-------------DRERVEQSLKEFRNFVDTHSNVVE 246
                H+  A  H      I P              D  R+E++   +   +  + N+ +
Sbjct: 369 LRELGHLDEALEHHAAALRIAPDYAEGYCNAGLVLQDLGRLEEARAHYSQALSINPNLAQ 428

Query: 247 ACTLFAQVLVDQEDFDGAEEYFNRSIRVDPENASLYVHRAMLMLQARGNVDEAIKLIEKA 306
           A         + +    A E + R++ ++P  A  + +  +++L+ +GN DEA +  E+A
Sbjct: 429 AHGNLGNYWQELKRCHEALECYRRALAIEPRFAEAHNNMGLVLLE-QGNFDEARERFEQA 487

Query: 307 ISIDKSCMFAYETLGTIEVQRGRLEEAVKCFNKALPLARDEAEL 350
           +SI    + AY  LGT   + GR ++A+ CF++AL ++ D A L
Sbjct: 488 LSIRPDYVDAYLNLGTCHGRVGRYDKALDCFDRALRISPDLATL 531



 Score = 56.6 bits (135), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 60/269 (22%), Positives = 112/269 (41%), Gaps = 38/269 (14%)

Query: 261 FDGAEEYFNRSIRVDPENASLYVHRAMLMLQARGNVDEAIKLIEKAISIDKSCMFAYETL 320
            D A +++ R++R+ P  A  + +R   +L   G+++EA+  +  AI++      A+  L
Sbjct: 205 LDDALDHYTRALRISPRFAEAHNNRGGTLLSL-GHLEEALTSLRDAIALKADFAEAHHNL 263

Query: 321 GTIEVQRGRLEEAVKCFNKALPLARDEAELSHIYSLRDAAIAQMKVCERYNIKKKVSPRS 380
           G +  ++GR +EAV  + +A  L  D A L H   L    + ++                
Sbjct: 264 GQVLAEQGRFDEAVASYRQAGLLNPDLAGLQHSLGLAFYRLGRL---------------- 307

Query: 381 QNITKNEKLAIKQLRENNDIIIRPADKGGKTVVMDKADYTQKMTSILNSND--YEIIPGD 438
                +E LA   L   ++      D+ G  V+ D+ +  +++     + D     +  D
Sbjct: 308 -----DEALASLSLAARSE-----PDQAG--VLSDQGNILRELGRFEEARDSYRRALAID 355

Query: 439 PTKTIEESEKYGNLENESGQKHAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQ 498
           P   +  +   GNL  E G    A +   A      A ++ P+ A+ Y   G +    G+
Sbjct: 356 PANALAHT-NLGNLLRELGHLDEALEHHAA------ALRIAPDYAEGYCNAGLVLQDLGR 408

Query: 499 YEEALRNLDKTIALNPNFHVARAQRHFVW 527
            EEA  +  + +++NPN   A       W
Sbjct: 409 LEEARAHYSQALSINPNLAQAHGNLGNYW 437



 Score = 52.0 bits (123), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 71/355 (20%), Positives = 144/355 (40%), Gaps = 42/355 (11%)

Query: 163 AEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQRHFVVHKMIVPG 222
           A ++ P  A+++  RG      G  EEAL +L   IAL  +F    A+ H  + +++   
Sbjct: 215 ALRISPRFAEAHNNRGGTLLSLGHLEEALTSLRDAIALKADF----AEAHHNLGQVLA-- 268

Query: 223 DRERVEQSLKEFRNFVDTHSNVVEACTLFAQVLVDQEDFDGAEEYFNRSIRVDPENASLY 282
           ++ R ++++  +R     + ++                 D A    + + R +P+ A + 
Sbjct: 269 EQGRFDEAVASYRQAGLLNPDLAGLQHSLGLAFYRLGRLDEALASLSLAARSEPDQAGVL 328

Query: 283 VHRAMLMLQARGNVDEAIKLIEKAISIDKSCMFAYETLGTIEVQRGRLEEAVKCFNKALP 342
             +  + L+  G  +EA     +A++ID +   A+  LG +  + G L+EA++    AL 
Sbjct: 329 SDQGNI-LRELGRFEEARDSYRRALAIDPANALAHTNLGNLLRELGHLDEALEHHAAALR 387

Query: 343 LARDEAELSHIYSLRDAAIAQMKVCERYNIKKKVSPRSQNITKNEKLAIKQLRENNDIII 402
           +A D AE            A + + +   +++  +  SQ ++ N  LA       N    
Sbjct: 388 IAPDYAE--------GYCNAGLVLQDLGRLEEARAHYSQALSINPNLAQAHGNLGN---- 435

Query: 403 RPADKGGKTVVMDKADYTQKMTSILNSND-YEIIPGDPTKTIEESEKYGNLENESGQKHA 461
                           Y Q++     + + Y        +  E     G +  E G    
Sbjct: 436 ----------------YWQELKRCHEALECYRRALAIEPRFAEAHNNMGLVLLEQG---- 475

Query: 462 ASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNF 516
             +F +A    ++A  + P+  D+Y   G  +   G+Y++AL   D+ + ++P+ 
Sbjct: 476 --NFDEARERFEQALSIRPDYVDAYLNLGTCHGRVGRYDKALDCFDRALRISPDL 528



 Score = 48.5 bits (114), Expect = 0.009,   Method: Compositional matrix adjust.
 Identities = 51/245 (20%), Positives = 105/245 (42%), Gaps = 22/245 (8%)

Query: 155 KAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQRHFV 214
           +A   L +A  +  + A++++  GQ+    G+++EA+ +  +   LNP+    +      
Sbjct: 241 EALTSLRDAIALKADFAEAHHNLGQVLAEQGRFDEAVASYRQAGLLNPDLAGLQHSLGLA 300

Query: 215 VHKMIVPGDRERVEQSLKEFRNFVDTHSNVVEACTLFAQVLVDQEDFDGAEEYFNRSIRV 274
            +++       R++++L        +  +     +    +L +   F+ A + + R++ +
Sbjct: 301 FYRL------GRLDEALASLSLAARSEPDQAGVLSDQGNILRELGRFEEARDSYRRALAI 354

Query: 275 DPENASLYVHRAMLMLQARGNVDEAIKLIEKAISIDKSCMFAYETLGTIEVQRGRLEEAV 334
           DP NA  + +   L L+  G++DEA++    A+ I       Y   G +    GRLEEA 
Sbjct: 355 DPANALAHTNLGNL-LRELGHLDEALEHHAAALRIAPDYAEGYCNAGLVLQDLGRLEEAR 413

Query: 335 KCFNKALP----LARDEAELSHIYSLRDAAIAQMKVC----ERYNIKKKVSPRSQNITKN 386
             +++AL     LA+    L + +        ++K C    E Y     + PR      N
Sbjct: 414 AHYSQALSINPNLAQAHGNLGNYWQ-------ELKRCHEALECYRRALAIEPRFAEAHNN 466

Query: 387 EKLAI 391
             L +
Sbjct: 467 MGLVL 471


>gi|196012289|ref|XP_002116007.1| hypothetical protein TRIADDRAFT_60002 [Trichoplax adhaerens]
 gi|190581330|gb|EDV21407.1| hypothetical protein TRIADDRAFT_60002 [Trichoplax adhaerens]
          Length = 1313

 Score = 63.5 bits (153), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 54/256 (21%), Positives = 115/256 (44%), Gaps = 31/256 (12%)

Query: 168 PNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNP----NFHVARAQRHFVVHKMIVPGD 223
           P++A +Y+  G +Y   G+Y++AL   +K++ + P    + H++ A  +  +  + +   
Sbjct: 603 PSIAATYHNIGGVYRHQGKYDDALSMYNKSLKIQPTQLGDNHLSIAATYHNIGSVYIHQG 662

Query: 224 R-----ERVEQSLK-EFRNFVDTHSNVVEACTLFAQVLVDQEDFDGAEEYFNRSIRVD-- 275
           +         +SLK +   F D H ++    +   QV   Q  +D A   +N+S++++  
Sbjct: 663 KYDDALSMYNKSLKIQLTQFGDNHLSIAVTYSNIGQVYNHQGKYDDALSMYNKSLKIELT 722

Query: 276 ------PENASLYVHRAMLMLQARGNVDEAIKLIEKAISI--------DKSCMFAYETLG 321
                 P  A+ Y++   +  + +G  D+A+ +  K++ I          S    Y  +G
Sbjct: 723 QLGDNHPSIATTYINIGSVY-KDQGKYDDALSMYNKSLKILLTQLGDNHPSIALTYNNIG 781

Query: 322 TIEVQRGRLEEAVKCFNKALPLARDEAELSHIYSLRDAAIAQMKVCERYNIKKKVSPRSQ 381
            +   +G+ ++A+  +NK+L +   + + +H       AI    V + YN + K      
Sbjct: 782 QVYRDQGKYDDALSMYNKSLKIRLTQLDDNH----PSIAITYSNVGQVYNDQGKYDDALS 837

Query: 382 NITKNEKLAIKQLREN 397
              K+ K+ + QL  N
Sbjct: 838 MYNKSLKIKLTQLGHN 853



 Score = 61.6 bits (148), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 109/496 (21%), Positives = 196/496 (39%), Gaps = 57/496 (11%)

Query: 67  KAKRAFEHEDYLTAIRHCTE---EIESTSSNHTKALARLLRATVYI----FTSQSTKAIE 119
           K  + FE  DY  A+ H  E   +I+STS N        L   +Y+    +     K IE
Sbjct: 21  KGMKCFEEGDYEQALLHYKEAVTQIQSTSKNSNNNHHHQLEHDIYLDIADYYLNQYKLIE 80

Query: 120 D----------LTQLVEDTSVDPKIKVNAHIKRAVVHLHAA-SDFTKAFADLDE-AEKVD 167
                        QL +   +         IK     L+ A  DF K+     E +E  D
Sbjct: 81  ADKWRGNAEILAEQLQDRVRIAKCFDRQGCIKELQGDLNGALKDFNKSLGIKSEWSENED 140

Query: 168 PNVADSYYQRGQIYCLFGQYEEALRNLDKTIAL--------NPNFHVARAQRHFVVHKMI 219
            N++ SY   G IY   G+Y++AL   +K++ +        +P   V  +    V +   
Sbjct: 141 INMSKSYLNIGSIYDKQGKYDDALSMYNKSLKIQLTQLDDNHPKIAVTYSNIGGVYNDQG 200

Query: 220 VPGDR-ERVEQSLK-EFRNFVDTHSNVVEACTLFAQVLVDQEDFDGAEEYFNRSIRVD-- 275
              D      +SLK +     D H ++         V   Q  +D A   +N+S+++   
Sbjct: 201 KYDDALSMYNKSLKIQLTQLGDNHPSIATTYHNIGGVYYHQGKYDDALSMYNKSLKIQLT 260

Query: 276 ------PENASLYVHRAMLMLQARGNVDEAIKLIEKAISID--------KSCMFAYETLG 321
                 P  A+ Y H    +   +G  D+A+ ++ K++ I          S    Y  +G
Sbjct: 261 QLDDNHPSIATTY-HNIGGVYNDQGKYDDALSMLNKSLKIQLTQLGDNHPSIATTYHNIG 319

Query: 322 TIEVQRGRLEEAVKCFNKALPLARDEAELSHIYSLRDAAIAQMKVCERYNIKKKVSPRSQ 381
            +   +G+ ++A+  +NK+L +   +   +H       A     +   YN + K      
Sbjct: 320 DVYRDQGKYDDALSMYNKSLKIQLTQLGDNH----PSIASTYHSIGSVYNRQGKYDDALS 375

Query: 382 NITKNEKLAIKQLRENN-DIIIRPADKGGKTVVMDKADYTQKMTSILNSNDYEIIP-GDP 439
              K+ K+ + QL +N+  I     + GG  V   +  Y   ++    S   ++   GD 
Sbjct: 376 MYNKSLKIQLTQLGDNHPSIAATYHNIGG--VYNHQGKYDDALSMYNKSLKIQLTQLGDN 433

Query: 440 TKTIEES-EKYGNLENESGQ-KHAASDFTKAFA-DLDEAEKVDPNVADSYYQRGQIYCLF 496
             +I  +    G + N  G+   A S + K+    L +     P++A +Y+  G +Y   
Sbjct: 434 HPSIATTYHNIGGVYNRQGKCDDALSMYNKSLKIQLTQLGDNHPSIAATYHNIGGVYRDQ 493

Query: 497 GQYEEALRNLDKTIAL 512
           G+Y++AL   +K++ +
Sbjct: 494 GKYDDALSMYNKSLKI 509



 Score = 58.2 bits (139), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 83/407 (20%), Positives = 162/407 (39%), Gaps = 49/407 (12%)

Query: 168  PNVADSYYQRGQIYCLFGQYEEALRNLDKTIA-----LNPNFHVARAQRHFVVHKMIVPG 222
            P++A +Y+  G +Y   G+Y++AL   +K++      LN N        H +    +V  
Sbjct: 855  PSIAATYHSIGDVYKDQGKYDDALSMYNKSLKIKLTQLNDNHPSIATTYHNI---GVVYK 911

Query: 223  DRERVEQSLK--------EFRNFVDTHSNVVEACTLFAQVLVDQEDFDGAEEYFNRSIRV 274
            D+   + +L         +       H  +         +  DQ  +D A   +N+S+++
Sbjct: 912  DQGEYDDALSMCNKSLKIQLTQLGHNHPGIAATYNSIGSIYKDQGKYDDALSMYNKSLKI 971

Query: 275  D--------PENASLYVHRAMLMLQARGNVDEAIKLIEKAISID--------KSCMFAYE 318
                     P  A+ Y H    + + +GN D+A+ +  K++ I          S    Y 
Sbjct: 972  KLTQLGHNHPSIATTY-HNIGNVYKDQGNYDDALSMYNKSLKIQLTQLGDNHPSIATTYN 1030

Query: 319  TLGTIEVQRGRLEEAVKCFNKALPLARDEAELSHIYSLRDAAIAQMKVCERYNIKKKVSP 378
            ++G++   +G+ ++A+  +NK+L +   +   +H       A     +   Y  +     
Sbjct: 1031 SIGSVYKDQGKYDDALSMYNKSLKIKLTQLGHNH----PGIATTYHNIGVVYEDQGNYDD 1086

Query: 379  RSQNITKNEKLAIKQLRENNDIIIRPADKGGKTVVMDKADYTQKMTSILNSNDYEIIP-G 437
                  K+ K+ + QL  N+  I    +  G +V  D+  Y   ++    S   ++   G
Sbjct: 1087 ALPMYNKSLKIQLTQLAHNHPSIATTYNSIG-SVYNDQGKYDDALSMYNKSLKIKLTQLG 1145

Query: 438  DPTKTIEES-EKYGNLENESGQ-KHAASDFTKAFA-DLDEAEKVDPNVADSYYQRGQIYC 494
                +I  +    G + N  G    A S + K+    L +     P++A +Y   G +Y 
Sbjct: 1146 HNHPSIATTYHNIGGVYNHQGNYDDALSMYNKSLKIQLTQLGHNHPSIATTYLSIGSVYK 1205

Query: 495  LFGQYEEALRNLDKT-----IALNPNFHVARAQR--HFVWTSTLAEL 534
              G+Y++AL  L+K+     + L+P  H  +        WT   A L
Sbjct: 1206 DQGKYDDALSMLNKSLQIFLVTLDPKKHFFQTANTIGLDWTRLAATL 1252



 Score = 58.2 bits (139), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 81/384 (21%), Positives = 160/384 (41%), Gaps = 50/384 (13%)

Query: 168 PNVADSYYQRGQIYCLFGQYEEALRNLDKTIALN----PNFHVARAQRHFVVHKMIVPGD 223
           P++A +Y+  G +Y   G+Y++AL  L+K++ +      + H + A  +  +      GD
Sbjct: 267 PSIATTYHNIGGVYNDQGKYDDALSMLNKSLKIQLTQLGDNHPSIATTYHNI------GD 320

Query: 224 RER-----------VEQSLK-EFRNFVDTHSNVVEACTLFAQVLVDQEDFDGAEEYFNRS 271
             R             +SLK +     D H ++         V   Q  +D A   +N+S
Sbjct: 321 VYRDQGKYDDALSMYNKSLKIQLTQLGDNHPSIASTYHSIGSVYNRQGKYDDALSMYNKS 380

Query: 272 IRVD--------PENASLYVHRAMLMLQARGNVDEAIKLIEKAISID--------KSCMF 315
           +++         P  A+ Y H    +   +G  D+A+ +  K++ I          S   
Sbjct: 381 LKIQLTQLGDNHPSIAATY-HNIGGVYNHQGKYDDALSMYNKSLKIQLTQLGDNHPSIAT 439

Query: 316 AYETLGTIEVQRGRLEEAVKCFNKALPLARDEAELSHIYSLRDAAIAQMKVCERYNIKKK 375
            Y  +G +  ++G+ ++A+  +NK+L +   +   +H       A     +   Y  + K
Sbjct: 440 TYHNIGGVYNRQGKCDDALSMYNKSLKIQLTQLGDNH----PSIAATYHNIGGVYRDQGK 495

Query: 376 VSPRSQNITKNEKLAIKQLRENN-DIIIRPADKGGKTVVMDKADYTQKMTSILNSNDYEI 434
                    K+ K+ + QL +N+  I     + GG  V  D+  Y   ++    S   ++
Sbjct: 496 YDDALSMYNKSLKIRLTQLGDNHPSIAATYHNIGG--VYNDQGKYDDALSMYNKSLKIKL 553

Query: 435 IP-GDPTKTIEES-EKYGNLENESGQ-KHAASDFTKAFA-DLDEAEKVDPNVADSYYQRG 490
              GD   +I  +    G + N  G+   A S + K+    L +     P++A +Y+  G
Sbjct: 554 TQLGDNHPSIATTYHNIGGVYNRQGKCDDALSMYNKSLKIKLTQLGDNHPSIAATYHNIG 613

Query: 491 QIYCLFGQYEEALRNLDKTIALNP 514
            +Y   G+Y++AL   +K++ + P
Sbjct: 614 GVYRHQGKYDDALSMYNKSLKIQP 637



 Score = 48.9 bits (115), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 76/380 (20%), Positives = 154/380 (40%), Gaps = 46/380 (12%)

Query: 168  PNVADSYYQRGQIYCLFGQYEEALRNLDKTIA-----LNPNFHVARAQRHFV--VHKMIV 220
            P++A +Y   GQ+Y   G+Y++AL   +K++      L  N     A  H +  V+K   
Sbjct: 813  PSIAITYSNVGQVYNDQGKYDDALSMYNKSLKIKLTQLGHNHPSIAATYHSIGDVYK--- 869

Query: 221  PGDRERVEQSLKEFRNFV--------DTHSNVVEACTLFAQVLVDQEDFDGAEEYFNRSI 272
              D+ + + +L  +   +        D H ++         V  DQ ++D A    N+S+
Sbjct: 870  --DQGKYDDALSMYNKSLKIKLTQLNDNHPSIATTYHNIGVVYKDQGEYDDALSMCNKSL 927

Query: 273  RVD--------PENASLYVHRAMLMLQARGNVDEAIKLIEKAISID--------KSCMFA 316
            ++         P  A+ Y +    + + +G  D+A+ +  K++ I          S    
Sbjct: 928  KIQLTQLGHNHPGIAATY-NSIGSIYKDQGKYDDALSMYNKSLKIKLTQLGHNHPSIATT 986

Query: 317  YETLGTIEVQRGRLEEAVKCFNKALPLARDEAELSHIYSLRDAAIAQMKVCERYNIKKKV 376
            Y  +G +   +G  ++A+  +NK+L +   +   +H       A     +   Y  + K 
Sbjct: 987  YHNIGNVYKDQGNYDDALSMYNKSLKIQLTQLGDNH----PSIATTYNSIGSVYKDQGKY 1042

Query: 377  SPRSQNITKNEKLAIKQLRENNDIIIRPADKGGKTVVMDKADYTQKMTSILNSNDYEI-- 434
                    K+ K+ + QL  N+  I       G  V  D+ +Y   +     S   ++  
Sbjct: 1043 DDALSMYNKSLKIKLTQLGHNHPGIATTYHNIG-VVYEDQGNYDDALPMYNKSLKIQLTQ 1101

Query: 435  IPGDPTKTIEESEKYGNLENESGQ-KHAASDFTKAFA-DLDEAEKVDPNVADSYYQRGQI 492
            +  +           G++ N+ G+   A S + K+    L +     P++A +Y+  G +
Sbjct: 1102 LAHNHPSIATTYNSIGSVYNDQGKYDDALSMYNKSLKIKLTQLGHNHPSIATTYHNIGGV 1161

Query: 493  YCLFGQYEEALRNLDKTIAL 512
            Y   G Y++AL   +K++ +
Sbjct: 1162 YNHQGNYDDALSMYNKSLKI 1181


>gi|298675989|ref|YP_003727739.1| hypothetical protein Metev_2116 [Methanohalobium evestigatum
           Z-7303]
 gi|298288977|gb|ADI74943.1| TPR repeat-containing protein [Methanohalobium evestigatum Z-7303]
          Length = 461

 Score = 63.5 bits (153), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 66/329 (20%), Positives = 150/329 (45%), Gaps = 31/329 (9%)

Query: 57  NESHELDLLSKAKRAFEHEDYLTAIRHCTEEIESTSSNHTKALARLLRATVYIFTSQSTK 116
           N+  EL+ L K      HE+ L A       ++    ++   + + +  T      ++T+
Sbjct: 69  NKGFELNTLEK------HEEALEAFSKV---VDIKPDDNIGWIGKGIALTALERYEEATE 119

Query: 117 AIEDLTQLVEDTSVDPKIKVNAHIKRAVVHLHAASDFTKAFADLDEAEKVDPNVADSYYQ 176
           A ++  ++  + SV  K K         + L   + +  A     +A  ++P     + +
Sbjct: 120 AFDEAAKISPEDSVAWKSKG--------LSLKNLNHYDLALETFKKASDLNPEDDFIWIE 171

Query: 177 RGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQRHFVVHKMIVPGDRERVEQSLKEFRN 236
           +G +Y    +YE+AL + DK + +NP+   A   +   ++K+      ER E +LK F  
Sbjct: 172 KGILYDGLEKYEKALESYDKALEINPDNETAWINKGHTLNKL------ERYEDALKAFNK 225

Query: 237 FVDTHSNVVEACTLFAQVLVDQEDFDGAEEYFNRSIRVDPENASLYVHRAMLMLQARGNV 296
            +  + +  E       V      ++ A + +NR+I+++PE+   +  +  + L+ + + 
Sbjct: 226 AITINPDNEETWDYKGIVQEKLNLYEDALQSYNRAIKLNPESGYFWAKKGYI-LKIQEHS 284

Query: 297 DEAIKLIEKAISIDKSCMFAYETLGTIEVQRGRLEEAVKCFNKALPLARDEAELSHIYSL 356
           ++A+     ++ ++     A+   GTI  + G+ +EA+K +NK+L L  ++   S ++  
Sbjct: 285 EKALDSYNNSLELNPEYDLAWFYKGTILEEFGKYDEALKAYNKSLELNPNK---SIVWYN 341

Query: 357 RDAAIAQMKV----CERYNIKKKVSPRSQ 381
           +   + +M++     E YN   +++P  +
Sbjct: 342 KGFLLTKMQMYNEALEAYNKSLELNPEDE 370



 Score = 56.2 bits (134), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 46/216 (21%), Positives = 103/216 (47%), Gaps = 15/216 (6%)

Query: 140 IKRAVVHLHAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIA 199
           I++ +++      + KA    D+A +++P+   ++  +G       +YE+AL+  +K I 
Sbjct: 170 IEKGILY-DGLEKYEKALESYDKALEINPDNETAWINKGHTLNKLERYEDALKAFNKAIT 228

Query: 200 LNPNFHVARAQRHFVVHKMIVPGDRERVEQSLKEFRNFVDTHSNVVEACTLFAQ---VLV 256
           +NP+       +  V  K+ +       E +L+ +   +  +    E+   +A+   +L 
Sbjct: 229 INPDNEETWDYKGIVQEKLNL------YEDALQSYNRAIKLNP---ESGYFWAKKGYILK 279

Query: 257 DQEDFDGAEEYFNRSIRVDPENASLYVHRAMLMLQARGNVDEAIKLIEKAISIDKSCMFA 316
            QE  + A + +N S+ ++PE    + ++  + L+  G  DEA+K   K++ ++ +    
Sbjct: 280 IQEHSEKALDSYNNSLELNPEYDLAWFYKGTI-LEEFGKYDEALKAYNKSLELNPNKSIV 338

Query: 317 YETLGTIEVQRGRLEEAVKCFNKALPL-ARDEAELS 351
           +   G +  +     EA++ +NK+L L   DE  L+
Sbjct: 339 WYNKGFLLTKMQMYNEALEAYNKSLELNPEDEVTLT 374



 Score = 54.3 bits (129), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 76/360 (21%), Positives = 156/360 (43%), Gaps = 54/360 (15%)

Query: 176 QRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQRHFVVHKMIVPGDRERVEQSLKEFR 235
           + G++Y    ++++AL   ++ + LNP    A   + F ++ +      E+ E++L+ F 
Sbjct: 35  KEGELYRYANRHKDALNIFNRALKLNPRDVTAWKNKGFELNTL------EKHEEALEAFS 88

Query: 236 NFVDTHSNVVEACTLFAQVLVDQEDFDGAEEYFNRSIRVDPENASLYVHRAMLMLQARGN 295
             VD   +           L   E ++ A E F+ + ++ PE++  +  +  L L+   +
Sbjct: 89  KVVDIKPDDNIGWIGKGIALTALERYEEATEAFDEAAKISPEDSVAWKSKG-LSLKNLNH 147

Query: 296 VDEAIKLIEKAISIDKSCMFAYETLGTIEVQRGRLEEAVKCFNKALPLARDE--AELSHI 353
            D A++  +KA  ++    F +   G +     + E+A++ ++KAL +  D   A ++  
Sbjct: 148 YDLALETFKKASDLNPEDDFIWIEKGILYDGLEKYEKALESYDKALEINPDNETAWINKG 207

Query: 354 YSLRDAAIAQMKVCERYNIKKKVSPRSQNITKNEKLAIKQLRENNDIIIRPADKGGKTVV 413
           ++L           ERY                 + A+K    N  I I P ++      
Sbjct: 208 HTLNK--------LERY-----------------EDALKAF--NKAITINPDNE------ 234

Query: 414 MDKADYTQKMTSILNSNDYEIIPGDPTKTIEESEKYGNLENESG-----QKHAASDFTKA 468
            +  DY   +   LN   YE       + I+ + + G    + G     Q+H+     KA
Sbjct: 235 -ETWDYKGIVQEKLNL--YEDALQSYNRAIKLNPESGYFWAKKGYILKIQEHS----EKA 287

Query: 469 FADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQRHFVWT 528
               + + +++P    +++ +G I   FG+Y+EAL+  +K++ LNPN  +    + F+ T
Sbjct: 288 LDSYNNSLELNPEYDLAWFYKGTILEEFGKYDEALKAYNKSLELNPNKSIVWYNKGFLLT 347



 Score = 44.7 bits (104), Expect = 0.12,   Method: Compositional matrix adjust.
 Identities = 33/169 (19%), Positives = 73/169 (43%), Gaps = 41/169 (24%)

Query: 155 KAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQRHFV 214
           KA    + + +++P    +++ +G I   FG+Y+EAL+  +K++ LNPN  +    + F+
Sbjct: 286 KALDSYNNSLELNPEYDLAWFYKGTILEEFGKYDEALKAYNKSLELNPNKSIVWYNKGFL 345

Query: 215 VHKMIVPGDRERVEQSLKEFRNFVDTHSNVVEACTLFAQVLVDQEDFDGAEEYFNRSIRV 274
           + KM +                                        ++ A E +N+S+ +
Sbjct: 346 LTKMQM----------------------------------------YNEALEAYNKSLEL 365

Query: 275 DPENASLYVHRAMLMLQARGNVDEAIKLIEKAISIDKSCMFAYETLGTI 323
           +PE+      +  L+    G  ++A+K  +KA++I+     A+  +  +
Sbjct: 366 NPEDEVTLTSKG-LIYTYMGQYNKALKAYDKALNINPKYANAWYNMSCV 413


>gi|225620792|ref|YP_002722050.1| TPR domain-containing protein [Brachyspira hyodysenteriae WA1]
 gi|225215612|gb|ACN84346.1| TPR domain-containing protein [Brachyspira hyodysenteriae WA1]
          Length = 605

 Score = 63.5 bits (153), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 56/246 (22%), Positives = 114/246 (46%), Gaps = 15/246 (6%)

Query: 72  FEHEDYLTAIRHCTEEIESTSSNHTKALARLLRATVYIFTSQSTKAIEDLTQLVEDTSVD 131
           +E + Y  AI +  + IE  +  H+ A   L    VY    +  K++      +   + +
Sbjct: 301 YELKIYDEAIEYLNKAIE-LNPYHSGAYNNL--GLVYYAIKEYDKSLNYFNYSISLNNKE 357

Query: 132 PKIKVNAHIKRAVVHLHAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEAL 191
           PK   N  I +         D   A  D ++A +++PN ++ Y  RG +    G  EE++
Sbjct: 358 PKTYNNRGICK-----EKLKDNEGALEDYNKAIQLNPNYSEVYNNRGNVKIYLGNMEESI 412

Query: 192 RNLDKTIALNPNFHVARAQRHFVVHKMIVPGDRERVEQSLKEFRNFVDTHSNVVEACTLF 251
           ++ +K I LNPN+  A   R  +  ++      +  E +L+++   ++ + N+ E     
Sbjct: 413 KDYNKAIQLNPNYSEAYNNRGLLKRQL------KDNEGALEDYNKAIELNPNLSEVYNNR 466

Query: 252 AQVLVDQEDFDGAEEYFNRSIRVDPENASLYVHRAMLMLQARGNVDEAIKLIEKAISIDK 311
             +    +D +GA E ++++I ++P ++  Y +R        GN+D A+   + AI ++ 
Sbjct: 467 GTIKEILKDNEGALEDYDKAIELNPNDSEFYYNRGTAKTNL-GNIDGAVVDFDNAIELNP 525

Query: 312 SCMFAY 317
           + + AY
Sbjct: 526 NYVEAY 531



 Score = 53.5 bits (127), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 53/191 (27%), Positives = 95/191 (49%), Gaps = 14/191 (7%)

Query: 169 NVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQRHFVVHKMIVPGDRERVE 228
           N A ++Y  G        Y+EA+  L+K I LNP +H        +V+  I   D+    
Sbjct: 288 NYAGAFYNIGTAKYELKIYDEAIEYLNKAIELNP-YHSGAYNNLGLVYYAIKEYDK---- 342

Query: 229 QSLKEFRNFVDTHSNVVEACTLFAQVLVDQE--DFDGAEEYFNRSIRVDPENASLYVHRA 286
            SL  F   +  ++   E  T   + +  ++  D +GA E +N++I+++P  + +Y +R 
Sbjct: 343 -SLNYFNYSISLNNK--EPKTYNNRGICKEKLKDNEGALEDYNKAIQLNPNYSEVYNNRG 399

Query: 287 MLMLQARGNVDEAIKLIEKAISIDKSCMFAYETLGTIEVQRGRLEEAVKCFNKALPLARD 346
            + +   GN++E+IK   KAI ++ +   AY   G ++ Q    E A++ +NKA+ L   
Sbjct: 400 NVKIYL-GNMEESIKDYNKAIQLNPNYSEAYNNRGLLKRQLKDNEGALEDYNKAIEL--- 455

Query: 347 EAELSHIYSLR 357
              LS +Y+ R
Sbjct: 456 NPNLSEVYNNR 466



 Score = 51.6 bits (122), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 62/269 (23%), Positives = 107/269 (39%), Gaps = 44/269 (16%)

Query: 261 FDGAEEYFNRSIRVDPENASLYVHRAMLMLQARGNVDEAIKLIEKAISIDKSCMFAYETL 320
           +D A EY N++I ++P ++  Y +   L+  A    D+++     +IS++      Y   
Sbjct: 306 YDEAIEYLNKAIELNPYHSGAY-NNLGLVYYAIKEYDKSLNYFNYSISLNNKEPKTYNNR 364

Query: 321 GTIEVQRGRLEEAVKCFNKALPLARDEAELSHIYSLRDAAIAQMKVCER----YNIKKKV 376
           G  + +    E A++ +NKA+ L  + +E   +Y+ R      +   E     YN   ++
Sbjct: 365 GICKEKLKDNEGALEDYNKAIQLNPNYSE---VYNNRGNVKIYLGNMEESIKDYNKAIQL 421

Query: 377 SPRSQNITKNEKLAIKQLRENNDIIIRPADKGGKTVVMDKADYTQKMTSILNSNDYEIIP 436
           +P       N  L  +QL++N                                   E   
Sbjct: 422 NPNYSEAYNNRGLLKRQLKDN-----------------------------------EGAL 446

Query: 437 GDPTKTIEESEKYGNLENESGQ-KHAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCL 495
            D  K IE +     + N  G  K    D   A  D D+A +++PN ++ YY RG     
Sbjct: 447 EDYNKAIELNPNLSEVYNNRGTIKEILKDNEGALEDYDKAIELNPNDSEFYYNRGTAKTN 506

Query: 496 FGQYEEALRNLDKTIALNPNFHVARAQRH 524
            G  + A+ + D  I LNPN+  A   R+
Sbjct: 507 LGNIDGAVVDFDNAIELNPNYVEAYFNRY 535



 Score = 40.4 bits (93), Expect = 2.7,   Method: Compositional matrix adjust.
 Identities = 27/96 (28%), Positives = 46/96 (47%), Gaps = 5/96 (5%)

Query: 117 AIEDLTQLVEDTSVDPKIKVNAHIKRAVVHLHAASDFTKAFADLDEAEKVDPNVADSYYQ 176
           A+ED  + +E   ++P +    +  R  +      D   A  D D+A +++PN ++ YY 
Sbjct: 445 ALEDYNKAIE---LNPNLS-EVYNNRGTIK-EILKDNEGALEDYDKAIELNPNDSEFYYN 499

Query: 177 RGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQRH 212
           RG      G  + A+ + D  I LNPN+  A   R+
Sbjct: 500 RGTAKTNLGNIDGAVVDFDNAIELNPNYVEAYFNRY 535


>gi|395762104|ref|ZP_10442773.1| TPR domain-containing protein [Janthinobacterium lividum PAMC
           25724]
          Length = 1070

 Score = 63.5 bits (153), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 93/435 (21%), Positives = 171/435 (39%), Gaps = 94/435 (21%)

Query: 145 VHLHAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNF 204
           +H  A + +T+A        + +P+  ++Y          GQ E+A +   + +AL P++
Sbjct: 212 MHEEAVASYTRAL-------QRNPDFVEAYCNLAVTLQSLGQLEQAEQAYRRALALRPDY 264

Query: 205 HVARAQRHFVVHKMI-------------------VPGDRE------RVEQSLKEFRNFVD 239
               A+ HF +   +                   +PGD E        +Q LK++++ + 
Sbjct: 265 ----AKAHFNLGNTLKAMQRNDDAIASYKATLALLPGDAEVYLNLGNAQQDLKQWQDAIV 320

Query: 240 THSNVVEAC-------TLFAQVLVDQEDFDGAEEYFNRSIRVDPENASLYVHRAMLMLQA 292
           ++  V++            A  L +  DF+GAE  + R+I   P  A LY + A   LQ+
Sbjct: 321 SYRAVLQLAPHTSAVHANLASALHEAGDFEGAEASYRRAIEATPGEAVLYNNLAR-ALQS 379

Query: 293 RGNVDEAIKLIEKAISIDKSCMFAYETLGTIEVQRGRLEEAVKCFNKALPLARDEA---- 348
           +G+V +AI   E+AI+ID + + A   LG ++ Q      A+    +A  L   +A    
Sbjct: 380 QGHVSDAIAAYEQAIAIDGNFVQALSNLGLLQCQEKNYASAIALCQRAQLLQPGDAQACI 439

Query: 349 ELSHIYSL---RDAAIAQMKVCERYNIKKKVSPRSQNITKNEKLAIKQLRENNDIIIRPA 405
           +L+ +Y     +D+A+   +             R+ ++     LA KQL +  + I R  
Sbjct: 440 QLAVVYGAAEEQDSALLYFQ-------------RAIDLAPGSALAYKQLGDYYNTIRR-- 484

Query: 406 DKGGKTVVMDKADYTQKMTSILNSNDYEIIPGDPTKTIEESEKYGNLENESGQKHAASDF 465
                   +    YT                G   + +++ + Y NL     +     D 
Sbjct: 485 ------FALAVEAYT----------------GATERELDDDDVYNNLGVALQKLKRYDDA 522

Query: 466 TKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNF---HVARAQ 522
             A+     A +++P    +    G +     +YE+A       IAL+P F   H A   
Sbjct: 523 NAAYL---RALEINPKNVSAICNLGNVLLAQQKYEQAQTRYQAAIALDPTFERAHFALGN 579

Query: 523 RHFVWTSTLAELMAF 537
            H +  +  A L  +
Sbjct: 580 CHVLTNAPTAALECY 594



 Score = 40.0 bits (92), Expect = 3.3,   Method: Compositional matrix adjust.
 Identities = 61/270 (22%), Positives = 108/270 (40%), Gaps = 24/270 (8%)

Query: 258 QEDFDGAEEYFNRSIRVDPENASLYVHRAMLMLQARGNVDEAIKLIEKAISIDKSCMFAY 317
           Q+    A + + R++ + P +A  Y +   +  QARG  +EA+    +A+  +   + AY
Sbjct: 176 QQQGKDALQAWQRTVELAPHDAEAYGNLG-IACQARGMHEEAVASYTRALQRNPDFVEAY 234

Query: 318 ETLGTIEVQRGRLEEAVKCFNKALPLARDEAELSHIYSLRDAAIAQMK---VCERYNIKK 374
             L       G+LE+A + + +AL L  D A+ +H ++L +   A  +       Y    
Sbjct: 235 CNLAVTLQSLGQLEQAEQAYRRALALRPDYAK-AH-FNLGNTLKAMQRNDDAIASYKATL 292

Query: 375 KVSPRSQNITKNEKLAIKQLRENNDIIIRPADKGGKTVVMDKADYTQKMTSILNS----- 429
            + P    +  N   A + L++  D I+          V+  A +T  + + L S     
Sbjct: 293 ALLPGDAEVYLNLGNAQQDLKQWQDAIV------SYRAVLQLAPHTSAVHANLASALHEA 346

Query: 430 NDYEIIPGDPTKTIE----ESEKYGNLENESGQKHAASDFTKAFADLDEAEKVDPNVADS 485
            D+E       + IE    E+  Y NL      +   SD   A A  ++A  +D N   +
Sbjct: 347 GDFEGAEASYRRAIEATPGEAVLYNNLARALQSQGHVSD---AIAAYEQAIAIDGNFVQA 403

Query: 486 YYQRGQIYCLFGQYEEALRNLDKTIALNPN 515
               G + C    Y  A+    +   L P 
Sbjct: 404 LSNLGLLQCQEKNYASAIALCQRAQLLQPG 433


>gi|374296370|ref|YP_005046561.1| tetratricopeptide repeat protein [Clostridium clariflavum DSM
           19732]
 gi|359825864|gb|AEV68637.1| tetratricopeptide repeat protein [Clostridium clariflavum DSM
           19732]
          Length = 263

 Score = 63.5 bits (153), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 37/113 (32%), Positives = 68/113 (60%), Gaps = 1/113 (0%)

Query: 252 AQVLVDQEDFDGAEEYFNRSIRVDPENASLYVHRAMLMLQARGNVDEAIKLIEKAISIDK 311
           AQ LV QE ++ A E F+++I ++ +++++++H+A+ + Q  G  +EAIKL EKAIS+  
Sbjct: 14  AQKLVLQEKYNDALELFDKAIALNEKDSAVFIHKALAVSQL-GRYNEAIKLAEKAISLKP 72

Query: 312 SCMFAYETLGTIEVQRGRLEEAVKCFNKALPLARDEAELSHIYSLRDAAIAQM 364
                Y  LG I       EEA+KCF K+  +  + A+ + + ++   A+ ++
Sbjct: 73  QNAVYYAFLGMIHYDSENYEEAIKCFKKSNEIDSENAQTTCLENVARIAMGEV 125


>gi|256004184|ref|ZP_05429167.1| TPR repeat-containing protein [Clostridium thermocellum DSM 2360]
 gi|281419440|ref|ZP_06250454.1| TPR repeat-containing protein [Clostridium thermocellum JW20]
 gi|385777968|ref|YP_005687133.1| hypothetical protein Clo1313_0600 [Clostridium thermocellum DSM
           1313]
 gi|419722004|ref|ZP_14249156.1| Tetratricopeptide TPR_1 repeat-containing protein [Clostridium
           thermocellum AD2]
 gi|419726971|ref|ZP_14253981.1| Tetratricopeptide TPR_1 repeat-containing protein [Clostridium
           thermocellum YS]
 gi|255991774|gb|EEU01873.1| TPR repeat-containing protein [Clostridium thermocellum DSM 2360]
 gi|281406846|gb|EFB37110.1| TPR repeat-containing protein [Clostridium thermocellum JW20]
 gi|316939648|gb|ADU73682.1| Tetratricopeptide TPR_1 repeat-containing protein [Clostridium
           thermocellum DSM 1313]
 gi|380769557|gb|EIC03467.1| Tetratricopeptide TPR_1 repeat-containing protein [Clostridium
           thermocellum YS]
 gi|380782043|gb|EIC11689.1| Tetratricopeptide TPR_1 repeat-containing protein [Clostridium
           thermocellum AD2]
          Length = 591

 Score = 63.5 bits (153), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 84/401 (20%), Positives = 166/401 (41%), Gaps = 59/401 (14%)

Query: 147 LHAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHV 206
           L  A    +A    ++A +++PN+A+ +Y +G       +Y EA+ + +++I L PNF  
Sbjct: 40  LFEAGKIEEAIQSYNKAIELNPNLAEIHYNKGVALFNLKKYNEAIESYNRSIELAPNFKE 99

Query: 207 ARAQRHFVVHKMIVPGDRERVEQSLKEFRNFVDTHSNVVEACTLFAQVLVDQEDFDGAEE 266
           A   +   +  ++V     + E++L+    F++   N     T+   +L+  E ++ A E
Sbjct: 100 AYLNKSICL--LVV----SKFEEALETVNKFIEMSPNEPNGYTVKGSILIMIEKYEEALE 153

Query: 267 YFNRSIRVDPENASLYVHRAMLMLQARGNVDEAIKLIEKAISIDKSCMFAYETLGTIEVQ 326
             N+ I ++P N S+                         +S+      AY   G   V 
Sbjct: 154 VSNKVIAMNPNNQSV-------------------------LSV------AYSNKGYALVW 182

Query: 327 RGRLEEAVKCFNKALPLARDEAELSHIYSLRDAAIAQMKVCERYNIKK-KVSPRSQNITK 385
             + +EA++  NK+L L+ D  +     SL  +++   +    +  K  K+ P +     
Sbjct: 183 LKKPKEALEACNKSLELSGDNLDAHIAISLAHSSLGNYEEAVNWCDKAIKIDPNAVEPYI 242

Query: 386 NEKLAIKQLRENNDIIIRPADKGGKTVVMDKADY-----TQKMTSILNSNDYEIIPG--- 437
           N+   +  L ++ + +     K  +  V     Y     T K  +++  N+YE       
Sbjct: 243 NKSNYLVNLGKSKEAL-ECCSKASELNVPQNPVYESIILTNKSAALIFENNYEEALAAAE 301

Query: 438 -----DPTKTIEESEKYGNLENESGQKHAASDFTKAFADLDEAEKVDPNVADSYYQRGQI 492
                DP   +    K  N  N +G    A  F+      D+A ++DP+  ++Y  +G  
Sbjct: 302 KAIELDPKNALAYVNK-ANALNMAGSYDEALSFS------DKAIEIDPDCGEAYGAKGSA 354

Query: 493 YCLFGQYEEALRNLDKTIALNPNFHVARAQRHFVWTSTLAE 533
               G+++E++    K I L+P   +   Q +    S+L+E
Sbjct: 355 LFYLGRFDESIETCKKAIELSPENIILCVQAYTNIGSSLSE 395



 Score = 62.0 bits (149), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 109/507 (21%), Positives = 214/507 (42%), Gaps = 96/507 (18%)

Query: 18  SFFKPSKQFIKTYLKSFPNDPILQPDGLSNGVELTNGDTNESHELDLLSKAKRAFEHEDY 77
           S F+ + + +  +++  PN+P              NG T +   L ++ K + A E  + 
Sbjct: 112 SKFEEALETVNKFIEMSPNEP--------------NGYTVKGSILIMIEKYEEALEVSNK 157

Query: 78  LTAIRHCTEEIESTS-SNHTKALARLLRATVYIFTSQSTKAIEDLTQLVEDTSVDPKIKV 136
           + A+    + + S + SN   AL         ++  +  +A+E   + +E +  +    +
Sbjct: 158 VIAMNPNNQSVLSVAYSNKGYAL---------VWLKKPKEALEACNKSLELSGDN----L 204

Query: 137 NAHIKRAVVHLHAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDK 196
           +AHI  ++ H  +  ++ +A    D+A K+DPN  + Y  +       G+ +EAL    K
Sbjct: 205 DAHIAISLAH-SSLGNYEEAVNWCDKAIKIDPNAVEPYINKSNYLVNLGKSKEALECCSK 263

Query: 197 TIALNPNFHVARAQRHFVVHKMIVPGDRERVEQSLKEFRNFVDTHSNVVEACTLFAQVLV 256
              LN                  VP +          + + + T+          +  L+
Sbjct: 264 ASELN------------------VPQN--------PVYESIILTNK---------SAALI 288

Query: 257 DQEDFDGAEEYFNRSIRVDPENASLYVHRAMLMLQARGNVDEAIKLIEKAISIDKSCMFA 316
            + +++ A     ++I +DP+NA  YV++A   L   G+ DEA+   +KAI ID  C  A
Sbjct: 289 FENNYEEALAAAEKAIELDPKNALAYVNKAN-ALNMAGSYDEALSFSDKAIEIDPDCGEA 347

Query: 317 YETLGTIEVQRGRLEEAVKCFNKALPLARDEAELS-HIYSLRDAAIAQMKVCERYNIKKK 375
           Y   G+     GR +E+++   KA+ L+ +   L    Y+   +++++  + E       
Sbjct: 348 YGAKGSALFYLGRFDESIETCKKAIELSPENIILCVQAYTNIGSSLSEKGMYEE------ 401

Query: 376 VSPRSQNITKNEKLAIKQLRENNDIIIRPADKGGKTVVMDKADYTQKMTSILNSNDYEII 435
                +N+ K  +L  K  +    I I  ++K    + ++K +   +  +       + I
Sbjct: 402 ---ALKNLDKALELPSKNAKA---ISIAYSNKAYALIGLEKLEDALECAN-------KAI 448

Query: 436 PGDPTKTIEESEKYGNLENESGQKHAASDFTKAFADLDEAEKVDPNVAD--SYYQRGQIY 493
             DP+  +  S       N+S      S + +A    DEA K+  N+AD   Y  +G   
Sbjct: 449 EADPSNVMGYS-------NKSSVLMRLSRYKEALECCDEAIKL--NIADYAVYNNKGLAL 499

Query: 494 CLFGQYEEALRNLDKTIALNPNFHVAR 520
              G+  +AL   +K++ LNP++  A+
Sbjct: 500 ESQGKLGKALEAFNKSLELNPDYKNAQ 526



 Score = 55.8 bits (133), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 57/230 (24%), Positives = 101/230 (43%), Gaps = 52/230 (22%)

Query: 116 KAIEDLTQLVEDTSVDPKIKVNAHIKRAVVHLHAASDFTKAFADLDEAEKVDPNVADSYY 175
           +AIE   + +E   + P  K  A++ +++  L   S F +A   +++  ++ PN  + Y 
Sbjct: 82  EAIESYNRSIE---LAPNFK-EAYLNKSICLL-VVSKFEEALETVNKFIEMSPNEPNGYT 136

Query: 176 QRGQIYCLFGQYEEALRNLDKTIALNPN----FHVARAQRHFVVHKMIVPGDRERVEQSL 231
            +G I  +  +YEEAL   +K IA+NPN      VA + + + +  +  P +        
Sbjct: 137 VKGSILIMIEKYEEALEVSNKVIAMNPNNQSVLSVAYSNKGYALVWLKKPKE-------- 188

Query: 232 KEFRNFVDTHSNVVEACTLFAQVLVDQEDFDGAEEYFNRSIRVDPENASLYVHRAM-LML 290
                        +EAC                    N+S+ +  +N  L  H A+ L  
Sbjct: 189 ------------ALEAC--------------------NKSLELSGDN--LDAHIAISLAH 214

Query: 291 QARGNVDEAIKLIEKAISIDKSCMFAYETLGTIEVQRGRLEEAVKCFNKA 340
            + GN +EA+   +KAI ID + +  Y       V  G+ +EA++C +KA
Sbjct: 215 SSLGNYEEAVNWCDKAIKIDPNAVEPYINKSNYLVNLGKSKEALECCSKA 264


>gi|427724340|ref|YP_007071617.1| hypothetical protein Lepto7376_2509 [Leptolyngbya sp. PCC 7376]
 gi|427356060|gb|AFY38783.1| Tetratricopeptide TPR_1 repeat-containing protein [Leptolyngbya sp.
           PCC 7376]
          Length = 925

 Score = 63.5 bits (153), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 46/187 (24%), Positives = 87/187 (46%), Gaps = 7/187 (3%)

Query: 155 KAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQRHFV 214
           +A    D+A +++P+  D++  RG      G+ EEA+ + DK++ +NPN + A   R   
Sbjct: 128 EAITSYDKALEINPDDQDTWNNRGSTLSDLGRKEEAITSYDKSLEINPNHYQAWRNRGSA 187

Query: 215 VHKMIVPGDRERVEQSLKEFRNFVDTHSNVVEACTLFAQVLVDQEDFDGAEEYFNRSIRV 274
           +       D  R E+++  F   ++ + N  EA       L+  E ++ A   F+++  +
Sbjct: 188 L------SDLGRKEEAIISFDKALEINPNYHEAWGARGNALLACERYEEAITSFDKAFDI 241

Query: 275 DPENASLYVHRAMLMLQARGNVDEAIKLIEKAISIDKSCMFAYETLGTIEVQRGRLEEAV 334
            P        R    L+  G  +EAI   +KA+ I+ +   A+   G   V+  +  E +
Sbjct: 242 SPNYDETPYGRGY-ALEKLGKHEEAIISFDKALEINPNHYQAWNGKGRALVELAQFSEGI 300

Query: 335 KCFNKAL 341
             +NK+L
Sbjct: 301 DSYNKSL 307



 Score = 47.4 bits (111), Expect = 0.020,   Method: Compositional matrix adjust.
 Identities = 65/292 (22%), Positives = 119/292 (40%), Gaps = 61/292 (20%)

Query: 252 AQVLVDQEDFDGAEEYFNRSIRVDPENASLYVHRAMLMLQARGNVDEAIKLIEKAISIDK 311
           A+ + + +D + AE +FN+  +          H A       G   EAI   +KA+ I+ 
Sbjct: 64  AEQIPEPKDSNDAEAWFNQGYQF---------HIA-------GRFIEAIASYDKALEINP 107

Query: 312 SCMFAYETLGTIEVQRGRLEEAVKCFNKALPLARDEAELSHIYSLRDAAIAQM----KVC 367
           +    +   G+     G+ +EA+  ++KAL +  D+ +    ++ R + ++ +    +  
Sbjct: 108 NDQDIWNNRGSALSTLGKKDEAITSYDKALEINPDDQD---TWNNRGSTLSDLGRKEEAI 164

Query: 368 ERYNIKKKVSPRSQNITKNEKLAIKQLRENNDIIIRPADKGGKTVVMDKADYTQKMTSIL 427
             Y+   +++P      +N   A+  L    + II            DKA         +
Sbjct: 165 TSYDKSLEINPNHYQAWRNRGSALSDLGRKEEAIIS----------FDKA-------LEI 207

Query: 428 NSNDYEIIPGDPTKTIEESEKYGNLENESGQKHAASDFTKAFADLDEAEKVDPNVADSYY 487
           N N +E   G     +   E+Y         + A + F KAF        + PN  ++ Y
Sbjct: 208 NPNYHEAW-GARGNALLACERY---------EEAITSFDKAF-------DISPNYDETPY 250

Query: 488 QRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQRHFVWTSTLAELMAFSD 539
            RG      G++EEA+ + DK + +NPN + A   +       L EL  FS+
Sbjct: 251 GRGYALEKLGKHEEAIISFDKALEINPNHYQAWNGK----GRALVELAQFSE 298



 Score = 45.8 bits (107), Expect = 0.057,   Method: Compositional matrix adjust.
 Identities = 41/195 (21%), Positives = 89/195 (45%), Gaps = 9/195 (4%)

Query: 164 EKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQRHFVVHKMIVPGD 223
           E  D N A++++ +G  + + G++ EA+ + DK + +NPN       R   +  +     
Sbjct: 69  EPKDSNDAEAWFNQGYQFHIAGRFIEAIASYDKALEINPNDQDIWNNRGSALSTL----- 123

Query: 224 RERVEQSLKEFRNFVDTHSNVVEACTLFAQVLVDQEDFDGAEEYFNRSIRVDPENASLYV 283
             + ++++  +   ++ + +  +        L D    + A   +++S+ ++P +   + 
Sbjct: 124 -GKKDEAITSYDKALEINPDDQDTWNNRGSTLSDLGRKEEAITSYDKSLEINPNHYQAWR 182

Query: 284 HRAMLMLQARGNVDEAIKLIEKAISIDKSCMFAYETLGTIEVQRGRLEEAVKCFNKALPL 343
           +R    L   G  +EAI   +KA+ I+ +   A+   G   +   R EEA+  F+KA  +
Sbjct: 183 NRGS-ALSDLGRKEEAIISFDKALEINPNYHEAWGARGNALLACERYEEAITSFDKAFDI 241

Query: 344 AR--DEAELSHIYSL 356
           +   DE      Y+L
Sbjct: 242 SPNYDETPYGRGYAL 256



 Score = 40.0 bits (92), Expect = 3.5,   Method: Compositional matrix adjust.
 Identities = 20/61 (32%), Positives = 33/61 (54%)

Query: 147 LHAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHV 206
           L A   + +A    D+A  + PN  ++ Y RG      G++EEA+ + DK + +NPN + 
Sbjct: 222 LLACERYEEAITSFDKAFDISPNYDETPYGRGYALEKLGKHEEAIISFDKALEINPNHYQ 281

Query: 207 A 207
           A
Sbjct: 282 A 282


>gi|118357165|ref|XP_001011832.1| DNA polymerase family B containing protein [Tetrahymena thermophila]
 gi|89293599|gb|EAR91587.1| DNA polymerase family B containing protein [Tetrahymena thermophila
            SB210]
          Length = 2315

 Score = 63.5 bits (153), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 84/391 (21%), Positives = 167/391 (42%), Gaps = 59/391 (15%)

Query: 147  LHAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHV 206
             +    F  A    +E+ +++P   D Y   G IY      ++A++   K + + P+++ 
Sbjct: 1834 FYQQGKFQDALQKFNESLQINPLQVDIYNTIGSIYDQQNMKDQAIKQYQKALEIQPSYYT 1893

Query: 207  ARAQRHFVVHKMIVPGDRERVEQSLKEFRNFVDTHSNVVEACTLFAQVLVDQEDFDGAEE 266
            A      +    +   D+  V+++ + F+  +D + N ++     A        F  A +
Sbjct: 1894 A-----LLNLGNLYFWDKNMVKEANECFQKALDINPNSLQVLKRAALFYYSNNQFQEAIQ 1948

Query: 267  YFNRSIRVDPENASLYVHRAMLMLQARGNVDEAIKLIEKAISID-KSCMFAYETLGTIEV 325
             + +++ +DP++  ++   A +  Q  GN+ +AIK++EKAI  + ++  F Y+ LG    
Sbjct: 1949 NYEKALSIDPQDYEIFGCLAQVYHQI-GNIQKAIKILEKAIKQNPRNHQFHYD-LGNYSS 2006

Query: 326  QRGRLEEAVKCFNKAL--------PLARDEAELSHIYSLRDAAIAQMKVCERYNIKKKVS 377
            + G   EA++C+  AL         L     E   +  L +A    +K+ E Y       
Sbjct: 2007 EVGLKNEAIQCYLNALEINPEFYQALNNLGGEYIFMERLEEAQSCFLKILETY------- 2059

Query: 378  PRSQNITKNEKLAIKQLRENNDIIIRPADKGGKTVVMDKADYTQKMTSILNSN-DYEIIP 436
            P+  N       A+ QL      ++   ++G   ++ +  DY QK   +LN+N DY+   
Sbjct: 2060 PQDFN-------ALIQL------VVLCIERG---MIEEAKDYLQK--CLLNNNLDYDACN 2101

Query: 437  GDPTKTIEESEKYGNLENESGQKHAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLF 496
            G      +  E  G +E             +A    ++A K++PN  D       ++ + 
Sbjct: 2102 G----IAQCYEALGMIE-------------EAIFWCEKALKINPNSVDVLSNIALLHFMN 2144

Query: 497  GQYEEALRNLDKTIALNPNFHVARAQRHFVW 527
            G  EE+    +KT+ + P+   A     F++
Sbjct: 2145 GNTEESKICFEKTLKIKPDHSYALTNLGFIY 2175



 Score = 50.4 bits (119), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 66/312 (21%), Positives = 127/312 (40%), Gaps = 36/312 (11%)

Query: 59   SHELDLLSKAKRAFEHEDYLTAIRHCTEEIESTSSNHTKALARLLRATVYIFTSQSTKAI 118
            S+   LL+     F  ++ +     C ++    + N  + L R   A  Y   +Q  +AI
Sbjct: 1890 SYYTALLNLGNLYFWDKNMVKEANECFQKALDINPNSLQVLKR--AALFYYSNNQFQEAI 1947

Query: 119  EDLTQLVEDTSVDPKIKVNAHIKRAVVHL-HAASDFTKAFADLDEAEKVDPNVADSYYQR 177
            ++  + +   S+DP+   +  I   +  + H   +  KA   L++A K +P     +Y  
Sbjct: 1948 QNYEKAL---SIDPQ---DYEIFGCLAQVYHQIGNIQKAIKILEKAIKQNPRNHQFHYDL 2001

Query: 178  GQIYCLFGQYEEALRNLDKTIALNPNFHVARAQRHFVVHKMIVPGD---RERVEQSLKEF 234
            G      G   EA++     + +NP F+ A            + G+    ER+E++   F
Sbjct: 2002 GNYSSEVGLKNEAIQCYLNALEINPEFYQALNN---------LGGEYIFMERLEEAQSCF 2052

Query: 235  RNFVDTHSNVVEACTLFAQVLVDQEDFDGAEEYF-----NRSIRVDPENASLYVHRAMLM 289
               ++T+     A      + +++   + A++Y      N ++  D  N     + A+  
Sbjct: 2053 LKILETYPQDFNALIQLVVLCIERGMIEEAKDYLQKCLLNNNLDYDACNGIAQCYEAL-- 2110

Query: 290  LQARGNVDEAIKLIEKAISIDKSCMFAYETLGTIEVQRGRLEEAVKCFNKALPLARDEA- 348
                G ++EAI   EKA+ I+ + +     +  +    G  EE+  CF K L +  D + 
Sbjct: 2111 ----GMIEEAIFWCEKALKINPNSVDVLSNIALLHFMNGNTEESKICFEKTLKIKPDHSY 2166

Query: 349  ---ELSHIYSLR 357
                L  IY L+
Sbjct: 2167 ALTNLGFIYYLQ 2178



 Score = 45.8 bits (107), Expect = 0.057,   Method: Compositional matrix adjust.
 Identities = 44/167 (26%), Positives = 76/167 (45%), Gaps = 15/167 (8%)

Query: 178  GQIYCLFGQYEEALRNLDKTIALNPNFHVARAQRHFVVHKMIVPGDRERVEQSLKEFRNF 237
             Q Y   G  EEA+   +K + +NPN  V       ++H M   G+ E  +   ++    
Sbjct: 2104 AQCYEALGMIEEAIFWCEKALKINPN-SVDVLSNIALLHFM--NGNTEESKICFEKTLKI 2160

Query: 238  VDTHSNVVEACTLFAQVLVDQEDFDGAEEYFNRSIRVDPENASLYVHRAM----LMLQAR 293
               HS    A T    +   Q D+  A  ++ +SI +DP      +H       L+ Q +
Sbjct: 2161 KPDHS---YALTNLGFIYYLQGDYSKAISFYQQSIEIDPS-----MHHGFNNLGLIYQHQ 2212

Query: 294  GNVDEAIKLIEKAISIDKSCMFAYETLGTIEVQRGRLEEAVKCFNKA 340
            G  ++A +  EKA+ I  +   A   LG+I  + G++E+A++ + KA
Sbjct: 2213 GLAEQAKQQYEKALQILPNFAQALNNLGSIYYKNGKIEDAIEYYKKA 2259


>gi|449126815|ref|ZP_21763092.1| hypothetical protein HMPREF9733_00495, partial [Treponema denticola
           SP33]
 gi|448945453|gb|EMB26324.1| hypothetical protein HMPREF9733_00495, partial [Treponema denticola
           SP33]
          Length = 299

 Score = 63.5 bits (153), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 67/266 (25%), Positives = 115/266 (43%), Gaps = 49/266 (18%)

Query: 114 STKAIEDLTQLVEDTSVDPKIKVNAHIKRAVVHLHAASDFTKAFADLDEAEKVDPNVADS 173
            T+AI   T+ +E    DP   + A++ R V +L+       A  D + A K++P    +
Sbjct: 20  GTRAIYYYTKAIE---TDPYY-IEAYLNRGVTYLNMGKK-EAALHDFNTAIKLNPKEDSA 74

Query: 174 YYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQRHFVVHKMIVPGDRERVEQSLKE 233
           YY +G +    G+   A  NL+K IALN      +  +++     I  G  E V  SL +
Sbjct: 75  YYWKGLVLAKIGKNGAARDNLNKAIALNN-----KNDQYYYTRARIYYGMEEYV-HSLND 128

Query: 234 FRNFVDTH---SNVVEACTLFAQVLVDQEDFDGAEEYFNRSIRVDPENASLY-------- 282
               V+ +   +N+ E   +  QVL   E +D A + + ++I +D  N + Y        
Sbjct: 129 LNTAVNLNPNAANLYETRGIVYQVL---EKYDNAIKDYKKTISLDSHNLTSYKGLVLIYA 185

Query: 283 --------VHRAMLMLQAR----------------GNVDEAIKLIEKAISIDKSCMFAYE 318
                   +  A ++L+ +                G  D+A+    KAI +     ++Y 
Sbjct: 186 AKKEYPKAIEAADILLEIKSDWLIFNVRAKLFFELGQCDKALDDCNKAIKLYPYIAYSYY 245

Query: 319 TLGTIEVQRGRLEEAVKCFNKALPLA 344
             G I +Q    E+A+K F+KA+ LA
Sbjct: 246 MRGWIYLQLKEYEKAIKDFDKAISLA 271



 Score = 51.6 bits (122), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 51/219 (23%), Positives = 98/219 (44%), Gaps = 13/219 (5%)

Query: 152 DFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQR 211
           D T+A     +A + DP   ++Y  RG  Y   G+ E AL + +  I LNP    A   +
Sbjct: 19  DGTRAIYYYTKAIETDPYYIEAYLNRGVTYLNMGKKEAALHDFNTAIKLNPKEDSAYYWK 78

Query: 212 HFVVHKMIVPG-DRERVEQSLKEFRNFVDTHSNVVEACTLFAQVLVDQEDFDGAEEYFNR 270
             V+ K+   G  R+ + +++    N  D +          A++    E++  +    N 
Sbjct: 79  GLVLAKIGKNGAARDNLNKAI-ALNNKNDQYYYTR------ARIYYGMEEYVHSLNDLNT 131

Query: 271 SIRVDPENASLYVHRAMLMLQARGNVDEAIKLIEKAISIDKSCMFAYETLGTIEVQRGRL 330
           ++ ++P  A+LY  R  ++ Q     D AIK  +K IS+D   + +Y+ L  I   +   
Sbjct: 132 AVNLNPNAANLYETRG-IVYQVLEKYDNAIKDYKKTISLDSHNLTSYKGLVLIYAAKKEY 190

Query: 331 EEAVKCFNKALPLARDEAELSHIYSLRDAAIAQMKVCER 369
            +A++  +  L +  D      I+++R     ++  C++
Sbjct: 191 PKAIEAADILLEIKSDWL----IFNVRAKLFFELGQCDK 225



 Score = 48.5 bits (114), Expect = 0.009,   Method: Compositional matrix adjust.
 Identities = 41/128 (32%), Positives = 58/128 (45%), Gaps = 9/128 (7%)

Query: 75  EDYLTAIRHCTEEIESTSSNHTKALARLLRATVYIFTSQSTKAIEDLTQLVEDTSVDPKI 134
           E Y  AI+   + I   S N T     +L   +Y    +  KAIE    L+E  S     
Sbjct: 154 EKYDNAIKDYKKTISLDSHNLTSYKGLVL---IYAAKKEYPKAIEAADILLEIKSDWLIF 210

Query: 135 KVNAHIKRAVVHLHAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNL 194
            V A +              KA  D ++A K+ P +A SYY RG IY    +YE+A+++ 
Sbjct: 211 NVRAKL------FFELGQCDKALDDCNKAIKLYPYIAYSYYMRGWIYLQLKEYEKAIKDF 264

Query: 195 DKTIALNP 202
           DK I+L P
Sbjct: 265 DKAISLAP 272



 Score = 47.8 bits (112), Expect = 0.016,   Method: Compositional matrix adjust.
 Identities = 65/275 (23%), Positives = 116/275 (42%), Gaps = 35/275 (12%)

Query: 257 DQEDFDGAEEYFNRSIRVDPENASLYVHRAMLMLQARGNVDEAIKLIEKAISIDKSCMFA 316
           +++D   A  Y+ ++I  DP     Y++R +  L   G  + A+     AI ++     A
Sbjct: 16  EKKDGTRAIYYYTKAIETDPYYIEAYLNRGVTYLNM-GKKEAALHDFNTAIKLNPKEDSA 74

Query: 317 YETLGTIEVQRGRLEEAVKCFNKALPLARDEAELSH----IYSLRDAAIAQMKVCERYNI 372
           Y   G +  + G+   A    NKA+ L     +  +    IY   +  +  +      N 
Sbjct: 75  YYWKGLVLAKIGKNGAARDNLNKAIALNNKNDQYYYTRARIYYGMEEYVHSLNDL---NT 131

Query: 373 KKKVSPRSQNITKNEKLAIKQLRENNDIIIRPADKGGKTVVMDKADYTQKMTSILNSNDY 432
              ++P + N+ +   + + Q+ E  D  I+   K   T+ +D  + T     +L     
Sbjct: 132 AVNLNPNAANLYETRGI-VYQVLEKYDNAIKDYKK---TISLDSHNLTSYKGLVLIYAAK 187

Query: 433 EIIPGDPTKTIEESEKYGNLEN-------------ESGQKHAASDFTKAFADLDEAEKVD 479
           +  P    K IE ++    +++             E GQ        KA  D ++A K+ 
Sbjct: 188 KEYP----KAIEAADILLEIKSDWLIFNVRAKLFFELGQ------CDKALDDCNKAIKLY 237

Query: 480 PNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNP 514
           P +A SYY RG IY    +YE+A+++ DK I+L P
Sbjct: 238 PYIAYSYYMRGWIYLQLKEYEKAIKDFDKAISLAP 272


>gi|282895612|ref|ZP_06303746.1| hypothetical protein CRD_00245 [Raphidiopsis brookii D9]
 gi|281199452|gb|EFA74316.1| hypothetical protein CRD_00245 [Raphidiopsis brookii D9]
          Length = 461

 Score = 63.5 bits (153), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 44/172 (25%), Positives = 76/172 (44%), Gaps = 41/172 (23%)

Query: 152 DFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQR 211
           ++ ++ ADLD+A K+DP  A++Y++RG       +YEEAL + ++ IAL+PN+      R
Sbjct: 311 NYKESLADLDQAIKIDPKYAEAYFKRGYALSWLRRYEEALLDFNQVIALDPNYLDGYLNR 370

Query: 212 HFVVHKMIVPGDRERVEQSLKEFRNFVDTHSNVVEACTLFAQVLVDQEDFDGAEEYFNRS 271
            +                                     +  +  DQ     A E FNR 
Sbjct: 371 GWT------------------------------------YIWLQNDQ----AALEDFNRV 390

Query: 272 IRVDPENASLYVHRAMLMLQARGNVDEAIKLIEKAISIDKSCMFAYETLGTI 323
           IR++P  A  Y H+ M  ++  G    A++  ++AI +D +  + Y   G +
Sbjct: 391 IRINPNYAEAYAHQGMAYIKL-GKYQAALESSKQAIRLDPNKSYGYTIQGDV 441



 Score = 55.5 bits (132), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 24/66 (36%), Positives = 42/66 (63%), Gaps = 2/66 (3%)

Query: 464 DFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQR 523
           ++ ++ ADLD+A K+DP  A++Y++RG       +YEEAL + ++ IAL+PN+      R
Sbjct: 311 NYKESLADLDQAIKIDPKYAEAYFKRGYALSWLRRYEEALLDFNQVIALDPNYLDGYLNR 370

Query: 524 H--FVW 527
              ++W
Sbjct: 371 GWTYIW 376



 Score = 41.6 bits (96), Expect = 1.1,   Method: Compositional matrix adjust.
 Identities = 18/63 (28%), Positives = 31/63 (49%)

Query: 465 FTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQRH 524
           + +A  D ++   +DPN  D Y  RG  Y      + AL + ++ I +NPN+  A A + 
Sbjct: 346 YEEALLDFNQVIALDPNYLDGYLNRGWTYIWLQNDQAALEDFNRVIRINPNYAEAYAHQG 405

Query: 525 FVW 527
             +
Sbjct: 406 MAY 408



 Score = 38.5 bits (88), Expect = 8.3,   Method: Compositional matrix adjust.
 Identities = 16/48 (33%), Positives = 28/48 (58%)

Query: 468 AFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPN 515
           A  D +   +++PN A++Y  +G  Y   G+Y+ AL +  + I L+PN
Sbjct: 383 ALEDFNRVIRINPNYAEAYAHQGMAYIKLGKYQAALESSKQAIRLDPN 430


>gi|443646867|ref|ZP_21129545.1| tetratricopeptide repeat family protein [Microcystis aeruginosa
            DIANCHI905]
 gi|443335696|gb|ELS50160.1| tetratricopeptide repeat family protein [Microcystis aeruginosa
            DIANCHI905]
          Length = 1254

 Score = 63.5 bits (153), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 51/187 (27%), Positives = 86/187 (45%), Gaps = 7/187 (3%)

Query: 162  EAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQRHFVVHKMIVP 221
            +A KVDP  A SY+  G +    GQ EEA+    + I   P++  A      V  ++   
Sbjct: 1006 QAIKVDPTYAKSYHNLGFLAAQQGQLEEAISYYQQAIESQPDYPSAFYNLGLVYEQL--- 1062

Query: 222  GDRERVEQSLKEFRNFVDTHSNVVEACTLFAQVLVDQEDFDGAEEYFNRSIRVDPENASL 281
               +  E+++  + + V   S  VE     AQ+   QE++  AE+Y+  ++ + P N  L
Sbjct: 1063 ---KETEKAIACYSHSVQLDSTNVEVYKSLAQLYDRQENYAKAEKYYRCALLLQPHNLEL 1119

Query: 282  YVHRAMLMLQARGNVDEAIKLIEKAISIDKSCMFAYETLGTIEVQRGRLEEAVKCFNKAL 341
              +  +++ + +   D+A+   +K I        AY  LG    Q+  L +A  CF KA+
Sbjct: 1120 RYNLGVVLYE-QEKFDKAVSCFQKIIQAKPQDAIAYLHLGISYKQQKLLTKAKSCFEKAI 1178

Query: 342  PLARDEA 348
             L  D A
Sbjct: 1179 ELDPDYA 1185



 Score = 39.3 bits (90), Expect = 6.1,   Method: Compositional matrix adjust.
 Identities = 59/247 (23%), Positives = 99/247 (40%), Gaps = 53/247 (21%)

Query: 274  VDPENASLYVHRAMLMLQARGNVDEAIKLIEKAISIDKSCMFAYETLGTIEVQRGRLEEA 333
            V  EN++ Y H+        G ++ A     +AI +D +   +Y  LG +  Q+G+LEEA
Sbjct: 975  VPEENSAAYYHQLGREKTLTGELESAKNFYLQAIKVDPTYAKSYHNLGFLAAQQGQLEEA 1034

Query: 334  VKCFNKALPLARDEAELSHIYSLRDAAIAQMKVCER------------------YNIKKK 375
            +  + +A+    D    S  Y+L      Q+K  E+                  Y    +
Sbjct: 1035 ISYYQQAIESQPDYP--SAFYNL-GLVYEQLKETEKAIACYSHSVQLDSTNVEVYKSLAQ 1091

Query: 376  VSPRSQNITKNEK-----LAIK----QLRENNDIIIRPADKGGKTVVMDKADYTQKMTSI 426
            +  R +N  K EK     L ++    +LR N  +++   +K  K V              
Sbjct: 1092 LYDRQENYAKAEKYYRCALLLQPHNLELRYNLGVVLYEQEKFDKAV-------------- 1137

Query: 427  LNSNDYEIIPGDPTKTIEESEKYGNLENESGQKHAASDFTKAFADLDEAEKVDPNVADSY 486
              S   +II   P   I     Y +L     Q+      TKA +  ++A ++DP+ A +Y
Sbjct: 1138 --SCFQKIIQAKPQDAI----AYLHLGISYKQQKL---LTKAKSCFEKAIELDPDYAMAY 1188

Query: 487  YQRGQIY 493
            Y  G +Y
Sbjct: 1189 YNLGVVY 1195


>gi|124026676|ref|YP_001015791.1| hypothetical protein NATL1_19711 [Prochlorococcus marinus str.
           NATL1A]
 gi|123961744|gb|ABM76527.1| Hypothetical protein NATL1_19711 [Prochlorococcus marinus str.
           NATL1A]
          Length = 865

 Score = 63.5 bits (153), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 61/229 (26%), Positives = 105/229 (45%), Gaps = 22/229 (9%)

Query: 155 KAFADLDEAE-------KVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVA 207
           K    L EAE       ++ P+ A+++Y  G I    GQ +EA  +L K I + P++ VA
Sbjct: 89  KDLGKLKEAELSYRKAIEIKPDYANAHYNLGNILRDLGQLKEAEISLRKAIEIKPDYAVA 148

Query: 208 RAQRHFVVHKMIVPGDRERVEQSLKEFRNFVDTHSNVVEACTLFAQVLVDQEDFDGAEEY 267
            +    V+  +   G  +    SL   R  ++ + ++ EA +    VL D E    AE  
Sbjct: 149 HSNLGNVLRDL---GKSKEAGLSL---RKAIELNPDLAEAYSNLGNVLRDLEKLKEAELS 202

Query: 268 FNRSIRVDPENASLYVHRAMLMLQARGNVDEAIKLIEKAISIDKSCMFAYETLGTIEVQR 327
             ++I + P+ A  + +   +++     + EA   + KAI ++     AY  LG +    
Sbjct: 203 TRKAIEIKPDYAVAHYNLGTILIDL-DKLKEAELSLRKAIELNPDLAEAYSNLGNVLRDL 261

Query: 328 GRLEEAVKCFNKALPLARDEAE--------LSHIYSLRDAAIAQMKVCE 368
           G+L+EA     KA+ +  D AE        LS++  L++A I+  K  E
Sbjct: 262 GKLKEAELSTRKAIEIKPDYAEAHSNLGGILSNLGKLKEAEISSRKAIE 310



 Score = 58.2 bits (139), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 58/222 (26%), Positives = 108/222 (48%), Gaps = 12/222 (5%)

Query: 156 AFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQRHFVV 215
           A   L +A +++P++A++Y   G +     + +EA  +  K I + P++ VA    H+ +
Sbjct: 165 AGLSLRKAIELNPDLAEAYSNLGNVLRDLEKLKEAELSTRKAIEIKPDYAVA----HYNL 220

Query: 216 HKMIVPGDRERVEQSLKEFRNFVDTHSNVVEACTLFAQVLVDQEDFDGAEEYFNRSIRVD 275
             +++  D ++++++    R  ++ + ++ EA +    VL D      AE    ++I + 
Sbjct: 221 GTILI--DLDKLKEAELSLRKAIELNPDLAEAYSNLGNVLRDLGKLKEAELSTRKAIEIK 278

Query: 276 PENASLYVHRAMLMLQARGNVDEAIKLIEKAISIDKSCMFAYETLGTIEVQRGRLEEAVK 335
           P+ A  + +   + L   G + EA     KAI I      AY  LGTI    G+ +EA  
Sbjct: 279 PDYAEAHSNLGGI-LSNLGKLKEAEISSRKAIEIKPDYGVAYSNLGTILKDIGKSQEAFD 337

Query: 336 CFNKALPLARDEAELSHIYS--LRDAAIAQ---MKVCERYNI 372
            + KAL +   + ++    S  LRDA I+Q   +K+ E  NI
Sbjct: 338 SYLKALDINPTDYDIYTSISIFLRDADISQLDKLKIKEILNI 379


>gi|427720352|ref|YP_007068346.1| PDZ/DHR/GLGF domain-containing protein [Calothrix sp. PCC 7507]
 gi|427352788|gb|AFY35512.1| PDZ/DHR/GLGF domain protein [Calothrix sp. PCC 7507]
          Length = 879

 Score = 63.5 bits (153), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 49/214 (22%), Positives = 97/214 (45%), Gaps = 3/214 (1%)

Query: 136 VNAHIKRAVVHLHAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLD 195
            NA+ +RA    +   D  KA  DL++A + +   + ++  RG +    G+ EEA+ +  
Sbjct: 602 ANAYTRRAAGR-YQQGDKQKALEDLNQATRFNRKHSLAWAFRGDVLRELGRNEEAITSYS 660

Query: 196 KTIALNPNFHVARAQRHFVVHKMIVPGDRERVEQSLKEFRNFVDTHSNVVEACTLFAQVL 255
           + +  N  +   +A   ++    +   D+   ++++ ++   +  ++    A  L     
Sbjct: 661 RAVEANSQWGTVKAADVYLTRGNLYT-DQANYQRAITDYDQVIRLNAKSAVAYALRGLAY 719

Query: 256 VDQEDFDGAEEYFNRSIRVDPENASLYVHRAMLMLQARGNVDEAIKLIEKAISIDKSCMF 315
             Q +   A   FN++ R+DP NA  Y  R  L    +G+   A+   EKA ++D   + 
Sbjct: 720 QRQGNNKAALSDFNQAARIDPNNAIAYFARG-LSYHTQGDYQGALAAYEKATTLDAKLLA 778

Query: 316 AYETLGTIEVQRGRLEEAVKCFNKALPLARDEAE 349
           A   LG I+ +   +E A++ F  A+ +    AE
Sbjct: 779 AVNNLGLIKYELQDMEGAIRQFQAAVNIDSKSAE 812



 Score = 51.2 bits (121), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 45/193 (23%), Positives = 77/193 (39%), Gaps = 42/193 (21%)

Query: 151 SDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQ 210
            D+  A AD D+A K+ PN  D+Y++ G  Y     Y  +L+N ++ I L+P    A A 
Sbjct: 268 GDYKGAIADYDQALKLSPNNPDAYFRLGAAYKELNDYPASLKNFEQVIRLSPKNATAYAW 327

Query: 211 RHFVVHKMIVPGDRERVEQSLKEFRNFVDTHSNVVEACTLFAQVLVDQEDFDGAEEYFNR 270
           R +                                        VLV  +D+ GA    N+
Sbjct: 328 RGY----------------------------------------VLVQMKDYQGALTNANK 347

Query: 271 SIRVDPENASLYVHRAMLMLQARG--NVDEAIKLIEKAISIDKSCMFAYETLGTIEVQRG 328
           SI +DP + +     A+L     G  +  +A+    + I    + + AY   G + V+  
Sbjct: 348 SISLDPNSRTTAFAYAVLAGAHLGLNDTQQALAATNQVIQRLPNQVDAYNLRGLLRVETK 407

Query: 329 RLEEAVKCFNKAL 341
             + A+  +++AL
Sbjct: 408 DYKLAIADYDQAL 420



 Score = 50.8 bits (120), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 47/198 (23%), Positives = 88/198 (44%), Gaps = 13/198 (6%)

Query: 80  AIRHCTEEIESTSSNHTKALAR--LLRATVYIFTSQSTKAIEDLTQLVEDTSVDPKIKVN 137
           AI   +  +E+ S   T   A   L R  +Y   +   +AI D  Q++    ++ K  V 
Sbjct: 655 AITSYSRAVEANSQWGTVKAADVYLTRGNLYTDQANYQRAITDYDQVIR---LNAKSAV- 710

Query: 138 AHIKRAVVHLHAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKT 197
           A+  R + +    ++   A +D ++A ++DPN A +Y+ RG  Y   G Y+ AL   +K 
Sbjct: 711 AYALRGLAYQRQGNN-KAALSDFNQAARIDPNNAIAYFARGLSYHTQGDYQGALAAYEKA 769

Query: 198 IALNPNFHVARAQRHFVVHKMIVPGDRERVEQSLKEFRNFVDTHSNVVEACTLFAQVLVD 257
             L+     A      + +++      + +E ++++F+  V+  S   E     A  L  
Sbjct: 770 TTLDAKLLAAVNNLGLIKYEL------QDMEGAIRQFQAAVNIDSKSAEPQLALATALYV 823

Query: 258 QEDFDGAEEYFNRSIRVD 275
           + D D   E    ++R+D
Sbjct: 824 KGDRDRGLELAQAALRLD 841



 Score = 50.4 bits (119), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 29/88 (32%), Positives = 46/88 (52%), Gaps = 2/88 (2%)

Query: 439 PTKTIEESEKYGNLENESGQKHAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQ 498
           PT T + + +  +L +  G K    D+  A AD D+A K+ PN  D+Y++ G  Y     
Sbjct: 246 PTVTRQRTAE--DLISLGGAKADKGDYKGAIADYDQALKLSPNNPDAYFRLGAAYKELND 303

Query: 499 YEEALRNLDKTIALNPNFHVARAQRHFV 526
           Y  +L+N ++ I L+P    A A R +V
Sbjct: 304 YPASLKNFEQVIRLSPKNATAYAWRGYV 331


>gi|386398767|ref|ZP_10083545.1| tetratricopeptide repeat protein,tetratricopeptide repeat protein
           [Bradyrhizobium sp. WSM1253]
 gi|385739393|gb|EIG59589.1| tetratricopeptide repeat protein,tetratricopeptide repeat protein
           [Bradyrhizobium sp. WSM1253]
          Length = 461

 Score = 63.5 bits (153), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 65/287 (22%), Positives = 127/287 (44%), Gaps = 24/287 (8%)

Query: 268 FNRSIRVDPENASLYVHRAMLMLQARGNVDEAIKLIEKAISIDKSCMFAYETLGTIEVQR 327
            +R+I +D +NA  +  R  L+ +A G+++ A   + KAI ++     +YE  G +   +
Sbjct: 95  IDRAIALDGKNAKAWRLRGDLLREAGGDLNRAAADLSKAIELNPQDSESYELRGVVYTNQ 154

Query: 328 GRLEEAVKCFNKALPLARDEAELS-------HIYSLRDAAIAQMKVCERYNIKKKVSPRS 380
            RL+ A+  +++A+ L  D A+         ++    + AI  +    R +  +   PRS
Sbjct: 155 RRLDRALADYDQAIKLKPDNAQAWSDRGVTYYLGGDNENAIRDLSEALRLDPNR---PRS 211

Query: 381 QNITKNEKLAIKQLRENNDIIIRPADKGGKTVVMDKAD---YTQKMTSILNSNDYEIIPG 437
                N   A K+L +    + R     G+ + +D      Y  +  S+    +Y+    
Sbjct: 212 YT---NRGAAYKKLGQ----LERSVADDGEAIRLDPKVPEYYDNRGLSLAAMGEYDKAIA 264

Query: 438 DPTKTIEESEKYGNLENESGQKHAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFG 497
           D  + +  + +     N     H   +   A +D + A K++PN A +Y  R  +Y   G
Sbjct: 265 DYDQALRLAPRPNFFANRGDSYHLKGELGAALSDYEAALKLEPNFAQTYNNRAVLYKKMG 324

Query: 498 QYEEALRNLDKTIALNPNFHVARAQRHFVWTSTLAELMAFSDEFMIP 544
           + ++AL + +  + L+P    A A R     + +AE++ F  E + P
Sbjct: 325 ERKKALADYETALRLDPGNDNAAAGRR----AMIAEIVKFGGEPLRP 367



 Score = 61.6 bits (148), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 92/360 (25%), Positives = 156/360 (43%), Gaps = 34/360 (9%)

Query: 81  IRHCTEEIESTS-SNHTKALARLLRATVYIFTSQS-TKAIEDLTQLVEDTSVDPKIKVNA 138
           I  C+  I+  S  +  +A A L+RA     TS   T+A+ D+ + +   ++D K    A
Sbjct: 53  IPACSATIDQASIPSSDRAAALLVRADANARTSGGLTQALRDIDRAI---ALDGK-NAKA 108

Query: 139 HIKRAVVHLHAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTI 198
              R  +   A  D  +A ADL +A +++P  ++SY  RG +Y    + + AL + D+ I
Sbjct: 109 WRLRGDLLREAGGDLNRAAADLSKAIELNPQDSESYELRGVVYTNQRRLDRALADYDQAI 168

Query: 199 ALNPNFHVARAQRHFVVHKMIVPGDRERVEQSLKE-FR---NFVDTHSNVVEACTLFAQV 254
            L P+   A + R    +   + GD E   + L E  R   N   +++N   A     Q+
Sbjct: 169 KLKPDNAQAWSDRGVTYY---LGGDNENAIRDLSEALRLDPNRPRSYTNRGAAYKKLGQL 225

Query: 255 LVDQEDFDGAEEYFNRSIRVDPENASLYVHRAMLMLQARGNVDEAIKLIEKAISIDKSCM 314
                D DG       +IR+DP+    Y +R  L L A G  D+AI   ++A+ +     
Sbjct: 226 ERSVAD-DG------EAIRLDPKVPEYYDNRG-LSLAAMGEYDKAIADYDQALRLAPRPN 277

Query: 315 FAYETLGTIEVQRGRLEEAVKCFNKALPLARDEAELSHIYSLRDAAIAQMKVCER----- 369
           F +   G     +G L  A+  +  AL L   E   +  Y+ R  A+   K+ ER     
Sbjct: 278 F-FANRGDSYHLKGELGAALSDYEAALKL---EPNFAQTYNNR--AVLYKKMGERKKALA 331

Query: 370 -YNIKKKVSPRSQNITKNEKLAIKQLRENNDIIIRP-ADKGGKTVVMDKADYTQKMTSIL 427
            Y    ++ P + N     +  I ++ +     +RP A   GK    D A   +++  ++
Sbjct: 332 DYETALRLDPGNDNAAAGRRAMIAEIVKFGGEPLRPLAANSGKGPSFDCATAKREVERVI 391


>gi|332709298|ref|ZP_08429260.1| Tfp pilus assembly protein PilF [Moorea producens 3L]
 gi|332351844|gb|EGJ31422.1| Tfp pilus assembly protein PilF [Moorea producens 3L]
          Length = 485

 Score = 63.5 bits (153), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 70/304 (23%), Positives = 135/304 (44%), Gaps = 14/304 (4%)

Query: 76  DYLT-AIRHCTEEIESTSSNHTKALARLLRATVYIFTSQSTKAIEDLTQLVEDTSVDPKI 134
           +YLT AI  C + +ES S N     A   R    I   Q     +D          D   
Sbjct: 3   NYLTEAIAACEQALESPSPNRAD-FASTCRVLGNIL--QGMGRFDDAIFWHSRVFDDKPN 59

Query: 135 KVNAHIKRAVVHLHAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNL 194
            V  + K   ++  +   +  A A    A  + P+  ++Y+   +IY   G  +E +   
Sbjct: 60  LVQVYAKIGSLYT-SQQQWQAAIASYYHALSLQPDFPEAYWSLAEIYSQLGNKDEEIECW 118

Query: 195 DKTIALNPNFHVARAQRHFVVHKMIVPGDRERVEQSLKEFRNFVDTHSNVVEACTLFAQV 254
            +T+ L P    A+AQ H+ + K  +   + + ++++  F+N ++  S++  A       
Sbjct: 119 YQTLRLKP--QSAKAQGHYKLGKAFLA--QGKPDRAIACFQNAIERDSSLWVAYYELGDC 174

Query: 255 LVDQEDFDGAEEYFNRSIRVDPENASLYVHRAMLMLQARGNVDEAIKLIEKAISIDKSCM 314
           L+ Q  +D A   + + + +DP  A  +   A + L+ +G VD AI    ++I +D +  
Sbjct: 175 LIAQGKWDNAIACYRKLLDLDPNQAKGHYKIAGIWLK-QGMVDTAIAAFRRSIEVDPNFP 233

Query: 315 FAYETLGTIEVQRGRLEEA-VKCFNKALPLARDEAELSHIYSLRDAAIAQMKVCERYNIK 373
            AY  L  + +Q+ + +EA V C  +A+     +   +++  L DA + + ++ E Y   
Sbjct: 234 GAYRELIQLLIQQQKWDEAIVSC--RAVIATVGDYPWTYV-QLGDALVKKGELTEAYTCY 290

Query: 374 KKVS 377
           +K +
Sbjct: 291 QKAA 294


>gi|34762717|ref|ZP_00143707.1| TETRATRICOPEPTIDE REPEAT FAMILY PROTEIN [Fusobacterium nucleatum
           subsp. vincentii ATCC 49256]
 gi|27887616|gb|EAA24695.1| TETRATRICOPEPTIDE REPEAT FAMILY PROTEIN [Fusobacterium nucleatum
           subsp. vincentii ATCC 49256]
          Length = 558

 Score = 63.5 bits (153), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 50/220 (22%), Positives = 95/220 (43%), Gaps = 29/220 (13%)

Query: 152 DFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPN---FHVAR 208
           DF KA  D + A +++PN    YY RG+++    +Y++A+ + +K I LNPN   +   R
Sbjct: 64  DFEKAIEDYNRAIELNPNNTSYYYNRGKVFYNLKKYKKAITDFNKAIKLNPNDKEYFYIR 123

Query: 209 AQRHF---VVHKMIVPGDRE----------------------RVEQSLKEFRNFVDTHSN 243
              ++   + +K I+  D+                          +++ +F   ++ + N
Sbjct: 124 GSSYYNLNIFNKAIIDFDKAIMITSDNEDYYNSRGSAYANLGNFNKAIADFNKAIELNPN 183

Query: 244 VVEACTLFAQVLVDQEDFDGAEEYFNRSIRVDPENASLYVHRAMLMLQARGNVDEAIKLI 303
             +A           +++  A   FN++I ++P +   Y +R  L      N   AI   
Sbjct: 184 FSDAYNNRGITYAYLKNYKEAIVNFNKAIDLNPSDEGYYYNRG-LAYNNFNNYKMAIINF 242

Query: 304 EKAISIDKSCMFAYETLGTIEVQRGRLEEAVKCFNKALPL 343
           +KAI ++ +   AY   G         +EA+  F+KA+ L
Sbjct: 243 DKAIELNPNFSVAYNNRGITYAYLKNYKEAIVNFDKAIDL 282



 Score = 58.5 bits (140), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 59/260 (22%), Positives = 105/260 (40%), Gaps = 42/260 (16%)

Query: 259 EDFDGAEEYFNRSIRVDPENASLYVHRAMLMLQARGNVDEAIKLIEKAISIDKSCMFAYE 318
           +DF+ A E +NR+I ++P N S Y +R  +    +    +AI    KAI ++ +    + 
Sbjct: 63  DDFEKAIEDYNRAIELNPNNTSYYYNRGKVFYNLKK-YKKAITDFNKAIKLNPNDKEYFY 121

Query: 319 TLGTIEVQRGRLEEAVKCFNKALPLARDEAELSHIYSLRDAAIAQM----KVCERYNIKK 374
             G+         +A+  F+KA+ +  D  +    Y+ R +A A +    K    +N   
Sbjct: 122 IRGSSYYNLNIFNKAIIDFDKAIMITSDNEDY---YNSRGSAYANLGNFNKAIADFNKAI 178

Query: 375 KVSPRSQNITKNEKLAIKQLRENNDIIIRPADKGGKTVVMDKADYTQKMTSILNSNDYEI 434
           +++P   +   N  +    L+   + I+            +KA               ++
Sbjct: 179 ELNPNFSDAYNNRGITYAYLKNYKEAIVN----------FNKA--------------IDL 214

Query: 435 IPGDPTKTIEESEKYGNLENESGQKHAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYC 494
            P D          Y N  N          +  A  + D+A +++PN + +Y  RG  Y 
Sbjct: 215 NPSDEGYYYNRGLAYNNFNN----------YKMAIINFDKAIELNPNFSVAYNNRGITYA 264

Query: 495 LFGQYEEALRNLDKTIALNP 514
               Y+EA+ N DK I LNP
Sbjct: 265 YLKNYKEAIVNFDKAIDLNP 284



 Score = 57.8 bits (138), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 62/279 (22%), Positives = 111/279 (39%), Gaps = 52/279 (18%)

Query: 265 EEYFNRSIRVDPENASLYVHRAMLMLQARGNV---------------DEAIKLIEKAISI 309
           EEY ++ I  +P +AS Y +R       RGN                ++AI+   +AI +
Sbjct: 21  EEY-SKKIEKNPNDASNYYNRGNAYYN-RGNTFISLEKFQEAVDDDFEKAIEDYNRAIEL 78

Query: 310 DKSCMFAYETLGTIEVQRGRLEEAVKCFNKALPLARDEAELSHIYSLRDAAIAQMKVCER 369
           + +    Y   G +     + ++A+  FNKA+ L  ++ E  +I   R ++   + +  +
Sbjct: 79  NPNNTSYYYNRGKVFYNLKKYKKAITDFNKAIKLNPNDKEYFYI---RGSSYYNLNIFNK 135

Query: 370 YNIKKKVSPRSQNITKNEKLAIKQLRENNDIIIRPADKGGKTVVMDKADYTQKMTSILNS 429
                                           I   DK       ++  Y  + ++  N 
Sbjct: 136 -------------------------------AIIDFDKAIMITSDNEDYYNSRGSAYANL 164

Query: 430 NDYEIIPGDPTKTIEESEKYGNLENESGQKHA-ASDFTKAFADLDEAEKVDPNVADSYYQ 488
            ++     D  K IE +  + +  N  G  +A   ++ +A  + ++A  ++P+    YY 
Sbjct: 165 GNFNKAIADFNKAIELNPNFSDAYNNRGITYAYLKNYKEAIVNFNKAIDLNPSDEGYYYN 224

Query: 489 RGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQRHFVW 527
           RG  Y  F  Y+ A+ N DK I LNPNF VA   R   +
Sbjct: 225 RGLAYNNFNNYKMAIINFDKAIELNPNFSVAYNNRGITY 263



 Score = 50.1 bits (118), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 45/192 (23%), Positives = 80/192 (41%), Gaps = 22/192 (11%)

Query: 167 DPNVADSYYQRGQIYCLFGQ---------------YEEALRNLDKTIALNPNFHVARAQR 211
           +PN A +YY RG  Y   G                +E+A+ + ++ I LNPN       R
Sbjct: 30  NPNDASNYYNRGNAYYNRGNTFISLEKFQEAVDDDFEKAIEDYNRAIELNPNNTSYYYNR 89

Query: 212 HFVVHKMIVPGDRERVEQSLKEFRNFVDTHSNVVEACTLFAQVLVDQEDFDGAEEYFNRS 271
             V + +      ++ ++++ +F   +  + N  E   +      +   F+ A   F+++
Sbjct: 90  GKVFYNL------KKYKKAITDFNKAIKLNPNDKEYFYIRGSSYYNLNIFNKAIIDFDKA 143

Query: 272 IRVDPENASLYVHRAMLMLQARGNVDEAIKLIEKAISIDKSCMFAYETLGTIEVQRGRLE 331
           I +  +N   Y  R        GN ++AI    KAI ++ +   AY   G         +
Sbjct: 144 IMITSDNEDYYNSRGSAYANL-GNFNKAIADFNKAIELNPNFSDAYNNRGITYAYLKNYK 202

Query: 332 EAVKCFNKALPL 343
           EA+  FNKA+ L
Sbjct: 203 EAIVNFNKAIDL 214



 Score = 46.2 bits (108), Expect = 0.042,   Method: Compositional matrix adjust.
 Identities = 32/169 (18%), Positives = 77/169 (45%), Gaps = 19/169 (11%)

Query: 104 RATVYIFTSQSTKAIEDLTQLVEDTSVDPKIKVNAHIKRAVVHLHAASDFTKAFADLDEA 163
           R   Y +     +AI +  + ++    D     N    R + + +  +++  A  + D+A
Sbjct: 191 RGITYAYLKNYKEAIVNFNKAIDLNPSDEGYYYN----RGLAY-NNFNNYKMAIINFDKA 245

Query: 164 EKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQRHFVVH------- 216
            +++PN + +Y  RG  Y     Y+EA+ N DK I LNP+  +A   +   +        
Sbjct: 246 IELNPNFSVAYNNRGITYAYLKNYKEAIVNFDKAIDLNPSDSLAFNLKEITIEIFEKEKS 305

Query: 217 -------KMIVPGDRERVEQSLKEFRNFVDTHSNVVEACTLFAQVLVDQ 258
                  K++  G+  ++++ + + ++  D++++ ++   L   ++ D+
Sbjct: 306 NKTEEFKKLLSEGNFNKLKEFISKEQDLKDSNNDAIKEFDLIENIIKDK 354


>gi|37523145|ref|NP_926522.1| hypothetical protein gll3576 [Gloeobacter violaceus PCC 7421]
 gi|35214148|dbj|BAC91517.1| gll3576 [Gloeobacter violaceus PCC 7421]
          Length = 526

 Score = 63.5 bits (153), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 43/152 (28%), Positives = 78/152 (51%), Gaps = 5/152 (3%)

Query: 224 RERVEQSLKEFRNFVDTHSNVVEACTLFAQVLVDQEDFDGAEEYFNRSIRVDPENASLYV 283
           R   E+++  F+  ++  S   +A       L +Q DF+GA   + R++ ++PE      
Sbjct: 79  RGEGEEAIHHFQRAIELRSYYTDAHFALGTALQEQRDFEGALGCYQRTLAIEPEYVK--A 136

Query: 284 HRAMLMLQAR-GNVDEAIKLIEKAISIDKSCMFAYETLGTIEVQRGRLEEAVKCFNKALP 342
           H  +  +Q   GN+D+AI    +A++++   + A+  LG +  +RG+LEEA  CF +A  
Sbjct: 137 HNNLGAVQRELGNLDDAIASYRRALALEPDYLEAHNNLGVVLRERGQLEEAALCFKRAFQ 196

Query: 343 LARDEAELSHIYSLRDAAIAQMKVCERYNIKK 374
           L  D AE    Y+L     +Q K+ E  ++ +
Sbjct: 197 LQPDFAEA--YYNLGLLLHSQQKLAEAISVYR 226


>gi|125975528|ref|YP_001039438.1| TPR repeat-containing protein [Clostridium thermocellum ATCC 27405]
 gi|125715753|gb|ABN54245.1| Tetratricopeptide TPR_1 repeat-containing protein [Clostridium
           thermocellum ATCC 27405]
          Length = 591

 Score = 63.5 bits (153), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 84/401 (20%), Positives = 166/401 (41%), Gaps = 59/401 (14%)

Query: 147 LHAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHV 206
           L  A    +A    ++A +++PN+A+ +Y +G       +Y EA+ + +++I L PNF  
Sbjct: 40  LFEAGKIEEAIQSYNKAIELNPNLAEIHYNKGVALFNLKKYNEAIESYNRSIELAPNFKE 99

Query: 207 ARAQRHFVVHKMIVPGDRERVEQSLKEFRNFVDTHSNVVEACTLFAQVLVDQEDFDGAEE 266
           A   +   +  ++V     + E++L+    F++   N     T+   +L+  E ++ A E
Sbjct: 100 AYLNKSICL--LVV----SKFEEALETVNKFIEMSPNEPNGYTVKGSILIMIEKYEEALE 153

Query: 267 YFNRSIRVDPENASLYVHRAMLMLQARGNVDEAIKLIEKAISIDKSCMFAYETLGTIEVQ 326
             N+ I ++P N S+                         +S+      AY   G   V 
Sbjct: 154 VSNKVIAMNPNNQSV-------------------------LSV------AYSNKGYALVW 182

Query: 327 RGRLEEAVKCFNKALPLARDEAELSHIYSLRDAAIAQMKVCERYNIKK-KVSPRSQNITK 385
             + +EA++  NK+L L+ D  +     SL  +++   +    +  K  K+ P +     
Sbjct: 183 LKKPKEALEACNKSLELSGDNLDAHIAISLAHSSLGNYEEAVNWCDKAIKIDPNAVEPYI 242

Query: 386 NEKLAIKQLRENNDIIIRPADKGGKTVVMDKADY-----TQKMTSILNSNDYEIIPG--- 437
           N+   +  L ++ + +     K  +  V     Y     T K  +++  N+YE       
Sbjct: 243 NKSNYLVNLGKSKEAL-ECCSKASELNVPQNPVYESIILTNKSAALIFENNYEEALAAAE 301

Query: 438 -----DPTKTIEESEKYGNLENESGQKHAASDFTKAFADLDEAEKVDPNVADSYYQRGQI 492
                DP   +    K  N  N +G    A  F+      D+A ++DP+  ++Y  +G  
Sbjct: 302 KAIELDPKNALAYVNK-ANALNMAGSYDEALSFS------DKAIEIDPDCGEAYGAKGSA 354

Query: 493 YCLFGQYEEALRNLDKTIALNPNFHVARAQRHFVWTSTLAE 533
               G+++E++    K I L+P   +   Q +    S+L+E
Sbjct: 355 LFYLGRFDESIETCKKAIELSPENIILCVQAYTNIGSSLSE 395



 Score = 63.2 bits (152), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 112/514 (21%), Positives = 209/514 (40%), Gaps = 110/514 (21%)

Query: 18  SFFKPSKQFIKTYLKSFPNDPILQPDGLSNGVELTNGDTNESHELDLLSKAKRAFEHEDY 77
           S F+ + + +  +++  PN+P              NG T +   L ++ K + A E  + 
Sbjct: 112 SKFEEALETVNKFIEMSPNEP--------------NGYTVKGSILIMIEKYEEALEVSNK 157

Query: 78  LTAIRHCTEEIESTS-SNHTKALARLLRATVYIFTSQSTKAIEDLTQLVEDTSVDPKIKV 136
           + A+    + + S + SN   AL         ++  +  +A+E   + +E +  +    +
Sbjct: 158 VIAMNPNNQSVLSVAYSNKGYAL---------VWLKKPKEALEACNKSLELSGDN----L 204

Query: 137 NAHIKRAVVHLHAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDK 196
           +AHI  ++ H  +  ++ +A    D+A K+DPN  + Y  +       G+ +EAL    K
Sbjct: 205 DAHIAISLAH-SSLGNYEEAVNWCDKAIKIDPNAVEPYINKSNYLVNLGKSKEALECCSK 263

Query: 197 TIALNPNFHVARAQRHFVVHKMIVPGDRERVEQSLKEFRNFVDTHSNVVEACTLFAQVLV 256
              LN                  VP +          + + + T+          +  L+
Sbjct: 264 ASELN------------------VPQN--------PVYESIILTNK---------SAALI 288

Query: 257 DQEDFDGAEEYFNRSIRVDPENASLYVHRAMLMLQARGNVDEAIKLIEKAISIDKSCMFA 316
            + +++ A     ++I +DP+NA  YV++A   L   G+ DEA+   +KAI ID  C  A
Sbjct: 289 FENNYEEALAAAEKAIELDPKNALAYVNKAN-ALNMAGSYDEALSFSDKAIEIDPDCGEA 347

Query: 317 YETLGTIEVQRGRLEEAVKCFNKALPLARDEAELSHIYSLRDAAIAQMKVCERYNIKKKV 376
           Y   G+     GR +E+++   KA+ L+ +   L               V    NI   +
Sbjct: 348 YGAKGSALFYLGRFDESIETCKKAIELSPENIILC--------------VQAYTNIGSSL 393

Query: 377 SPRSQNITKNEKLAIKQLRENNDIIIRPADKGGKTVVMDKADYTQKMTSILNSNDYE--- 433
           S         EK   ++  +N D  +    K  K + +    Y+ K  +++    +E   
Sbjct: 394 S---------EKGMYEEALKNLDKALELPSKNAKAISI---AYSNKAYALIGLEKFEDAL 441

Query: 434 -----IIPGDPTKTIEESEKYGNLENESGQKHAASDFTKAFADLDEAEKVDPNVAD--SY 486
                 I  DP+  +  S       N+S      S + +A    DEA K+  N+AD   Y
Sbjct: 442 ECANKAIEADPSNVMGYS-------NKSSVLMRLSRYKEALECCDEAIKL--NIADYAVY 492

Query: 487 YQRGQIYCLFGQYEEALRNLDKTIALNPNFHVAR 520
             +G      G+  +AL   +K++ LNP++  A+
Sbjct: 493 NNKGLALESQGKLGKALEAFNKSLELNPDYKNAQ 526



 Score = 55.5 bits (132), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 57/230 (24%), Positives = 101/230 (43%), Gaps = 52/230 (22%)

Query: 116 KAIEDLTQLVEDTSVDPKIKVNAHIKRAVVHLHAASDFTKAFADLDEAEKVDPNVADSYY 175
           +AIE   + +E   + P  K  A++ +++  L   S F +A   +++  ++ PN  + Y 
Sbjct: 82  EAIESYNRSIE---LAPNFK-EAYLNKSICLL-VVSKFEEALETVNKFIEMSPNEPNGYT 136

Query: 176 QRGQIYCLFGQYEEALRNLDKTIALNPN----FHVARAQRHFVVHKMIVPGDRERVEQSL 231
            +G I  +  +YEEAL   +K IA+NPN      VA + + + +  +  P +        
Sbjct: 137 VKGSILIMIEKYEEALEVSNKVIAMNPNNQSVLSVAYSNKGYALVWLKKPKE-------- 188

Query: 232 KEFRNFVDTHSNVVEACTLFAQVLVDQEDFDGAEEYFNRSIRVDPENASLYVHRAM-LML 290
                        +EAC                    N+S+ +  +N  L  H A+ L  
Sbjct: 189 ------------ALEAC--------------------NKSLELSGDN--LDAHIAISLAH 214

Query: 291 QARGNVDEAIKLIEKAISIDKSCMFAYETLGTIEVQRGRLEEAVKCFNKA 340
            + GN +EA+   +KAI ID + +  Y       V  G+ +EA++C +KA
Sbjct: 215 SSLGNYEEAVNWCDKAIKIDPNAVEPYINKSNYLVNLGKSKEALECCSKA 264


>gi|67923599|ref|ZP_00517071.1| TPR repeat:TPR repeat [Crocosphaera watsonii WH 8501]
 gi|67854569|gb|EAM49856.1| TPR repeat:TPR repeat [Crocosphaera watsonii WH 8501]
          Length = 1115

 Score = 63.5 bits (153), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 47/209 (22%), Positives = 94/209 (44%), Gaps = 8/209 (3%)

Query: 145 VHLHAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNF 204
           V  +   ++ +A   + E  +  PN    +Y  G++   F QYE+A+ + DK + L P++
Sbjct: 164 VEQYQRGEYQEAVNTVVEITQQYPNDYQGWYYLGELMGTFQQYEQAIASYDKALQLKPDY 223

Query: 205 HVARAQRHFVVHKMIVPGDRERVEQSLKEFRNFVDTHSNVVEACTLFAQVLVDQEDFDGA 264
           H A   R   ++++       R+++ +  +   +    +   A       L +   +D A
Sbjct: 224 HPAWVNRGVALYEL------GRLDEEIASYDKALQLKPDDDVAWNNRGYALGNLGRWDEA 277

Query: 265 EEYFNRSIRVDPENASLYVHRAMLMLQARGNVDEAIKLIEKAISIDKSCMFAYETLGTIE 324
              +++++++ P+    + +R + +    G  DEAI   +KA+ +      A++  G I 
Sbjct: 278 IASYDKALQLKPDKDEAWYNRGIALFNL-GRWDEAIASYDKALQLKPDYHPAWDHRGIIL 336

Query: 325 VQR-GRLEEAVKCFNKALPLARDEAELSH 352
               GR EEA+  F KAL +  D     H
Sbjct: 337 CDNLGRFEEAITSFEKALEIKPDYYSAWH 365



 Score = 60.8 bits (146), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 43/194 (22%), Positives = 87/194 (44%), Gaps = 6/194 (3%)

Query: 153 FTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQRH 212
           + +A A  D+A ++ P+   ++  RG      G+ +E + + DK + L P+  VA   R 
Sbjct: 206 YEQAIASYDKALQLKPDYHPAWVNRGVALYELGRLDEEIASYDKALQLKPDDDVAWNNRG 265

Query: 213 FVVHKMIVPGDRERVEQSLKEFRNFVDTHSNVVEACTLFAQVLVDQEDFDGAEEYFNRSI 272
           + +      G+  R ++++  +   +    +  EA       L +   +D A   +++++
Sbjct: 266 YAL------GNLGRWDEAIASYDKALQLKPDKDEAWYNRGIALFNLGRWDEAIASYDKAL 319

Query: 273 RVDPENASLYVHRAMLMLQARGNVDEAIKLIEKAISIDKSCMFAYETLGTIEVQRGRLEE 332
           ++ P+    + HR +++    G  +EAI   EKA+ I      A+   G       R  E
Sbjct: 320 QLKPDYHPAWDHRGIILCDNLGRFEEAITSFEKALEIKPDYYSAWHNRGVALSNLQRFNE 379

Query: 333 AVKCFNKALPLARD 346
            +  ++KAL L  D
Sbjct: 380 DIASYDKALQLKPD 393



 Score = 51.6 bits (122), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 34/157 (21%), Positives = 78/157 (49%), Gaps = 6/157 (3%)

Query: 153 FTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQRH 212
           + +A A  D+A ++ P+  +++Y RG      G+++EA+ + DK + L P++H A   R 
Sbjct: 274 WDEAIASYDKALQLKPDKDEAWYNRGIALFNLGRWDEAIASYDKALQLKPDYHPAWDHR- 332

Query: 213 FVVHKMIVPGDRERVEQSLKEFRNFVDTHSNVVEACTLFAQVLVDQEDFDGAEEYFNRSI 272
                +I+  +  R E+++  F   ++   +   A       L + + F+     +++++
Sbjct: 333 ----GIILCDNLGRFEEAITSFEKALEIKPDYYSAWHNRGVALSNLQRFNEDIASYDKAL 388

Query: 273 RVDPENASLYVHRAMLMLQARGNVDEAIKLIEKAISI 309
           ++ P+    + +R   +   R  +DEAI   +KA+ +
Sbjct: 389 QLKPDLHQAWYYRGNTLGNLR-RLDEAIASYDKALQL 424



 Score = 42.4 bits (98), Expect = 0.70,   Method: Compositional matrix adjust.
 Identities = 19/68 (27%), Positives = 37/68 (54%)

Query: 465 FTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQRH 524
           + +A A  D+A ++ P+  +++Y RG      G+++EA+ + DK + L P++H A   R 
Sbjct: 274 WDEAIASYDKALQLKPDKDEAWYNRGIALFNLGRWDEAIASYDKALQLKPDYHPAWDHRG 333

Query: 525 FVWTSTLA 532
            +    L 
Sbjct: 334 IILCDNLG 341



 Score = 39.7 bits (91), Expect = 3.8,   Method: Compositional matrix adjust.
 Identities = 19/72 (26%), Positives = 39/72 (54%)

Query: 452 LENESGQKHAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIA 511
           L +++ +++   ++ +A   + E  +  PN    +Y  G++   F QYE+A+ + DK + 
Sbjct: 159 LIDQAVEQYQRGEYQEAVNTVVEITQQYPNDYQGWYYLGELMGTFQQYEQAIASYDKALQ 218

Query: 512 LNPNFHVARAQR 523
           L P++H A   R
Sbjct: 219 LKPDYHPAWVNR 230


>gi|428209463|ref|YP_007093816.1| hypothetical protein Chro_4556 [Chroococcidiopsis thermalis PCC 7203]
 gi|428011384|gb|AFY89947.1| Tetratricopeptide TPR_1 repeat-containing protein [Chroococcidiopsis
            thermalis PCC 7203]
          Length = 1066

 Score = 63.5 bits (153), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 49/194 (25%), Positives = 94/194 (48%), Gaps = 7/194 (3%)

Query: 153  FTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQRH 212
            + KA A  D+  +V PN  +++YQRG       +YE A    +K + + PN   A  QR 
Sbjct: 820  YEKAIAAYDKVLEVRPNNPETWYQRGLALKELKRYEGAFAAFNKVLKVEPNDEKAWFQRG 879

Query: 213  FVVHKMIVPGDRERVEQSLKEFRNFVDTHSNVVEACTLFAQVLVDQEDFDGAEEYFNRSI 272
                  IV G   ++ +++  +   V+ +    +A       L   +  + A + F++++
Sbjct: 880  ------IVLGRASKLAEAIAAYDKAVEINPQYYQAWIDRGVALGKLQRHEEAFQSFDKAV 933

Query: 273  RVDPENASLYVHRAMLMLQARGNVDEAIKLIEKAISIDKSCMFAYETLGTIEVQRGRLEE 332
            ++ P++A  +++R M  L+     ++AI   +KAI  +     A+ + G + VQ  R  E
Sbjct: 934  QIKPDSAVAWLNRGM-ALEVLERYEDAIASYDKAIEFNPDSFKAWNSRGYLLVQLERDAE 992

Query: 333  AVKCFNKALPLARD 346
            A+  F++AL +  D
Sbjct: 993  ALTSFDRALQIKSD 1006



 Score = 47.4 bits (111), Expect = 0.020,   Method: Compositional matrix adjust.
 Identities = 52/213 (24%), Positives = 92/213 (43%), Gaps = 27/213 (12%)

Query: 328 GRLEEAVKCFNKALPLARDEAELSHIYSLRDAAIAQM-KVCERYNIKKKVSPRSQNITKN 386
           GR E AV  +N+AL L  D  ++ +   +    + Q  K    Y+   +V P +      
Sbjct: 784 GRYEAAVVAYNRALELKPDNPDVWYQLGIAHWELQQYEKAIAAYDKVLEVRPNNPETWYQ 843

Query: 387 EKLAIKQLRE--------NNDIIIRPADKGG---KTVVMDKADYTQKMTSILNSND--YE 433
             LA+K+L+         N  + + P D+     + +V+ +A    K+   + + D   E
Sbjct: 844 RGLALKELKRYEGAFAAFNKVLKVEPNDEKAWFQRGIVLGRAS---KLAEAIAAYDKAVE 900

Query: 434 IIPGDPTKTIEESEKYGNLENESGQKHAASDFTKAFADLDEAEKVDPNVADSYYQRGQIY 493
           I P      I+     G L     Q+H      +AF   D+A ++ P+ A ++  RG   
Sbjct: 901 INPQYYQAWIDRGVALGKL-----QRH-----EEAFQSFDKAVQIKPDSAVAWLNRGMAL 950

Query: 494 CLFGQYEEALRNLDKTIALNPNFHVARAQRHFV 526
            +  +YE+A+ + DK I  NP+   A   R ++
Sbjct: 951 EVLERYEDAIASYDKAIEFNPDSFKAWNSRGYL 983



 Score = 41.2 bits (95), Expect = 1.6,   Method: Compositional matrix adjust.
 Identities = 21/56 (37%), Positives = 31/56 (55%), Gaps = 1/56 (1%)

Query: 155  KAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQ 210
            +A    D A ++  + +++YY +   Y L GQ E AL NL + I LNP+ H   AQ
Sbjct: 992  EALTSFDRALQIKSDYSNAYYNKAACYALQGQAESALENLQQAIKLNPS-HREEAQ 1046



 Score = 41.2 bits (95), Expect = 1.6,   Method: Compositional matrix adjust.
 Identities = 21/56 (37%), Positives = 31/56 (55%), Gaps = 1/56 (1%)

Query: 467  KAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQ 522
            +A    D A ++  + +++YY +   Y L GQ E AL NL + I LNP+ H   AQ
Sbjct: 992  EALTSFDRALQIKSDYSNAYYNKAACYALQGQAESALENLQQAIKLNPS-HREEAQ 1046



 Score = 40.8 bits (94), Expect = 1.6,   Method: Compositional matrix adjust.
 Identities = 37/151 (24%), Positives = 68/151 (45%), Gaps = 12/151 (7%)

Query: 131  DPKIKVN-----AHIKRAVVHLHAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFG 185
            D  +++N     A I R V  L       +AF   D+A ++ P+ A ++  RG    +  
Sbjct: 896  DKAVEINPQYYQAWIDRGVA-LGKLQRHEEAFQSFDKAVQIKPDSAVAWLNRGMALEVLE 954

Query: 186  QYEEALRNLDKTIALNPNFHVARAQRHFVVHKMIVPGDRERVEQSLKEFRNFVDTHSNVV 245
            +YE+A+ + DK I  NP+   A   R +++ ++      ER  ++L  F   +   S+  
Sbjct: 955  RYEDAIASYDKAIEFNPDSFKAWNSRGYLLVQL------ERDAEALTSFDRALQIKSDYS 1008

Query: 246  EACTLFAQVLVDQEDFDGAEEYFNRSIRVDP 276
             A    A     Q   + A E   ++I+++P
Sbjct: 1009 NAYYNKAACYALQGQAESALENLQQAIKLNP 1039


>gi|406661890|ref|ZP_11070000.1| TPR repeat-containing protein yrrB [Cecembia lonarensis LW9]
 gi|405554248|gb|EKB49358.1| TPR repeat-containing protein yrrB [Cecembia lonarensis LW9]
          Length = 471

 Score = 63.5 bits (153), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 43/177 (24%), Positives = 85/177 (48%), Gaps = 7/177 (3%)

Query: 167 DPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQRHFVVHKMIVPGDRER 226
           DP  A ++Y  G +Y   G+YE+A++  D  + ++ +F    A  +F +    +  + ++
Sbjct: 199 DPYSAGAWYNLGVVYNRLGRYEDAIKAYDYALIIDESF----ASAYFNLGNAYM--NTQQ 252

Query: 227 VEQSLKEFRNFVDTHSNVVEACTLFAQVLVDQEDFDGAEEYFNRSIRVDPENASLYVHRA 286
            +Q+L+ ++N ++      E C          +  D A +YF +S ++DPE    +    
Sbjct: 253 YDQALEAYQNTINCEGANAENCCYLGAAYEKLDQIDMAFKYFKKSAKLDPEYDDAWFGLG 312

Query: 287 MLMLQARGNVDEAIKLIEKAISIDKSCMFAYETLGTIEVQRGRLEEAVKCFNKALPL 343
           M ML+ +    EAI   +KAI + +     +  L   E Q G L+ + + + +A+ L
Sbjct: 313 MCMLK-KSKYFEAIHYFKKAIKLTEENPNYWVGLADAEYQLGNLQASAEAYEEAINL 368



 Score = 48.1 bits (113), Expect = 0.011,   Method: Compositional matrix adjust.
 Identities = 43/178 (24%), Positives = 76/178 (42%), Gaps = 16/178 (8%)

Query: 156 AFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIAL---NPNFHVARAQRH 212
           AF    ++ K+DP   D+++  G       +Y EA+    K I L   NPN+ V  A   
Sbjct: 290 AFKYFKKSAKLDPEYDDAWFGLGMCMLKKSKYFEAIHYFKKAIKLTEENPNYWVGLADAE 349

Query: 213 FVVHKMIVPGDRERVEQSLKEFRNFVDTHSNVVEACTLFAQVLVDQEDFDGAEEYFNRSI 272
           + +  +         + S + +   ++    +VE     + +  DQ  F+   +     I
Sbjct: 350 YQLGNL---------QASAEAYEEAINLEPGIVETYINLSIIYFDQNRFEETIDVIKEGI 400

Query: 273 RVDPENASLYVHRAMLMLQARGNVDEAIKLIEKAISI--DKSCMFAYETLGTIEVQRG 328
              PE A LY +R ++ L   G   EA   +E A+++  DK  +  YE +  I+ Q+ 
Sbjct: 401 EELPEEAELY-YRMVVYLLKTGKYKEAFTYLENALTLNFDKHIIL-YELMPEIKQQKA 456


>gi|334116936|ref|ZP_08491028.1| serine/threonine protein kinase [Microcoleus vaginatus FGP-2]
 gi|333461756|gb|EGK90361.1| serine/threonine protein kinase [Microcoleus vaginatus FGP-2]
          Length = 732

 Score = 63.5 bits (153), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 92/380 (24%), Positives = 154/380 (40%), Gaps = 48/380 (12%)

Query: 151 SDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQ 210
            D T A AD  +A  ++   A++YY+R       G  E+A+++  + I ++P+   A   
Sbjct: 356 GDTTGAIADYTQAIALNAGDAETYYKRANARYDMGATEQAIQDYTQAIKVHPSHTKALYN 415

Query: 211 RHFVVHKMIVPGDRERVEQSLKEFRNFVDTHSNVVEACTLFAQVLVDQEDFDGAEEYFNR 270
           R     ++ +   R  VE    +F   V  + +  EA +       D  D+  A E + +
Sbjct: 416 RGMA--RLDIGDKRGAVE----DFTQVVRLNPSDGEAYSQRGLAYYDLGDYRTAIEDYTQ 469

Query: 271 SIRVDPENASLYVHRAMLMLQARGNVDEAIKLIEKAISIDKSCMFAYETLGTIEVQRGRL 330
           +IR+ P +A+ Y +R  L   A G+   A+    +A+ I       Y + G         
Sbjct: 470 AIRLSPNDATAYSNRG-LARSAAGDKTGAMADFTQALQISPKQAGVYYSRGRARFNLADY 528

Query: 331 EEAVKCFNKALPLARDEAELSHIYSLRDAAIAQMKVCERYNIKKKVSPRSQNITKNEKLA 390
           + A++ + KA+ L  D   L+  Y+ R         C  Y           N+   +K A
Sbjct: 529 QGAMEDYTKAIELQPD---LADAYTNR---------CSAY----------LNLATYDK-A 565

Query: 391 IKQLRENNDIIIRPADKGGKTVVMDKADYTQKMTSILNSNDYEIIPGDPTKTIEESEKYG 450
           I    E     IR A K       D+A Y  +  + LN   ++    D + TI  +   G
Sbjct: 566 IADCTEG----IRLAPK-------DEAAYNNRCIAYLNLKQFQKASEDCSLTIGLN---G 611

Query: 451 N----LENESGQKHAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNL 506
           N      N    + A+ D   A  D  +A +++P+ A +Y  RG IY     Y  A+ + 
Sbjct: 612 NNPKAYSNRGLARLASGDKQGAVEDFTQAIRLNPSDAVAYSNRGTIYSELKNYPLAVEDF 671

Query: 507 DKTIALNPNFHVARAQRHFV 526
             ++ LNP    A   R  V
Sbjct: 672 AHSLRLNPKNASAFYSRGLV 691



 Score = 55.1 bits (131), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 60/245 (24%), Positives = 99/245 (40%), Gaps = 22/245 (8%)

Query: 104 RATVYIFTSQSTKAIEDLTQLVEDTSVDPKIKVNAHIKRAVVHLHAASDFTKAFADLDEA 163
           R   Y        AIED TQ +  +  D     N  + R+     AA D T A AD  +A
Sbjct: 450 RGLAYYDLGDYRTAIEDYTQAIRLSPNDATAYSNRGLARS-----AAGDKTGAMADFTQA 504

Query: 164 EKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQR-----HFVVHKM 218
            ++ P  A  YY RG+       Y+ A+ +  K I L P+   A   R     +   +  
Sbjct: 505 LQISPKQAGVYYSRGRARFNLADYQGAMEDYTKAIELQPDLADAYTNRCSAYLNLATYDK 564

Query: 219 IVPGDRERVEQSLKEFRNFVDTHSNVVEACTLFAQVLVDQEDFDGAEEYFNRSIRVDPEN 278
            +    E +  + K+   + +        C  +    ++ + F  A E  + +I ++  N
Sbjct: 565 AIADCTEGIRLAPKDEAAYNNR-------CIAY----LNLKQFQKASEDCSLTIGLNGNN 613

Query: 279 ASLYVHRAMLMLQARGNVDEAIKLIEKAISIDKSCMFAYETLGTIEVQRGRLEEAVKCFN 338
              Y +R +  L A G+   A++   +AI ++ S   AY   GTI  +      AV+ F 
Sbjct: 614 PKAYSNRGLARL-ASGDKQGAVEDFTQAIRLNPSDAVAYSNRGTIYSELKNYPLAVEDFA 672

Query: 339 KALPL 343
            +L L
Sbjct: 673 HSLRL 677



 Score = 50.4 bits (119), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 47/193 (24%), Positives = 94/193 (48%), Gaps = 12/193 (6%)

Query: 117 AIEDLTQLVEDTSVDPKIKVNAHIKRAVVHLHAASDFTKAFADLDEAEKVDPNVADSYYQ 176
           A+ED T+ +E   + P +  +A+  R   +L+ A+ + KA AD  E  ++ P    +Y  
Sbjct: 531 AMEDYTKAIE---LQPDL-ADAYTNRCSAYLNLAT-YDKAIADCTEGIRLAPKDEAAYNN 585

Query: 177 RGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQRHFVVHKMIVPGDRERVEQSLKEFRN 236
           R   Y    Q+++A  +   TI LN N   A + R       +  GD++    ++++F  
Sbjct: 586 RCIAYLNLKQFQKASEDCSLTIGLNGNNPKAYSNRGLA---RLASGDKQ---GAVEDFTQ 639

Query: 237 FVDTHSNVVEACTLFAQVLVDQEDFDGAEEYFNRSIRVDPENASLYVHRAMLMLQARGNV 296
            +  + +   A +    +  + +++  A E F  S+R++P+NAS +  R ++  Q +   
Sbjct: 640 AIRLNPSDAVAYSNRGTIYSELKNYPLAVEDFAHSLRLNPKNASAFYSRGLVRRQLKDRA 699

Query: 297 DEAIKLIEKAISI 309
             AI+  +KA ++
Sbjct: 700 G-AIEDFQKAATL 711



 Score = 46.6 bits (109), Expect = 0.037,   Method: Compositional matrix adjust.
 Identities = 52/211 (24%), Positives = 84/211 (39%), Gaps = 15/211 (7%)

Query: 321 GTIEVQRGRLEEAVKCFNKALPLARDEAELSHIYSLRDAAIAQMKVCER----YNIKKKV 376
           G  + Q+G    A+  + +A+ L   +AE    Y  R  A   M   E+    Y    KV
Sbjct: 349 GVAKAQQGDTTGAIADYTQAIALNAGDAE---TYYKRANARYDMGATEQAIQDYTQAIKV 405

Query: 377 SPRSQNITKNEKLAIKQLRENNDIIIRPADKGGKTVVMDKAD---YTQKMTSILNSNDYE 433
            P       N  +A   + +    +    +   + V ++ +D   Y+Q+  +  +  DY 
Sbjct: 406 HPSHTKALYNRGMARLDIGDKRGAV----EDFTQVVRLNPSDGEAYSQRGLAYYDLGDYR 461

Query: 434 IIPGDPTKTIEESEKYGNLENESG-QKHAASDFTKAFADLDEAEKVDPNVADSYYQRGQI 492
               D T+ I  S       +  G  + AA D T A AD  +A ++ P  A  YY RG+ 
Sbjct: 462 TAIEDYTQAIRLSPNDATAYSNRGLARSAAGDKTGAMADFTQALQISPKQAGVYYSRGRA 521

Query: 493 YCLFGQYEEALRNLDKTIALNPNFHVARAQR 523
                 Y+ A+ +  K I L P+   A   R
Sbjct: 522 RFNLADYQGAMEDYTKAIELQPDLADAYTNR 552



 Score = 46.2 bits (108), Expect = 0.049,   Method: Compositional matrix adjust.
 Identities = 82/376 (21%), Positives = 141/376 (37%), Gaps = 70/376 (18%)

Query: 168 PNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPN---FHVARAQRHFVVHKMIVPGDR 224
           P  A  ++ RG      G    A+ +  + IALN      +  RA   +         D 
Sbjct: 339 PGRAKEWFARGVAKAQQGDTTGAIADYTQAIALNAGDAETYYKRANARY---------DM 389

Query: 225 ERVEQSLKEFRNFVDTHSNVVEACTLFAQVLVDQEDFDGAEEYFNRSIRVDPENASLYVH 284
              EQ+++++   +  H +  +A        +D  D  GA E F + +R++P +   Y  
Sbjct: 390 GATEQAIQDYTQAIKVHPSHTKALYNRGMARLDIGDKRGAVEDFTQVVRLNPSDGEAYSQ 449

Query: 285 RAMLMLQARGNVDEAIKLIEKAISIDKSCMFAYETLGTIEVQRGRLEEAVKCFNKALPLA 344
           R +      G+   AI+   +AI +  +   AY   G      G    A+  F +AL ++
Sbjct: 450 RGLAYYDL-GDYRTAIEDYTQAIRLSPNDATAYSNRGLARSAAGDKTGAMADFTQALQIS 508

Query: 345 RDEAELSHIYSLRDAAIAQMKVCERYNIKKKVSPRSQNITKNEKLAIKQLRENNDIIIRP 404
             +A    +Y  R  A        R+N+        Q   ++   AI+         ++P
Sbjct: 509 PKQA---GVYYSRGRA--------RFNLAD-----YQGAMEDYTKAIE---------LQP 543

Query: 405 ADKGGKTVVMDKAD-YTQKMTSILNSNDYEIIPGDPTKTIEESEK-----------YGNL 452
                     D AD YT + ++ LN   Y+    D T+ I  + K           Y NL
Sbjct: 544 ----------DLADAYTNRCSAYLNLATYDKAIADCTEGIRLAPKDEAAYNNRCIAYLNL 593

Query: 453 ENESGQKHAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIAL 512
           +           F KA  D      ++ N   +Y  RG      G  + A+ +  + I L
Sbjct: 594 KQ----------FQKASEDCSLTIGLNGNNPKAYSNRGLARLASGDKQGAVEDFTQAIRL 643

Query: 513 NPNFHVARAQRHFVWT 528
           NP+  VA + R  +++
Sbjct: 644 NPSDAVAYSNRGTIYS 659



 Score = 44.7 bits (104), Expect = 0.15,   Method: Compositional matrix adjust.
 Identities = 40/142 (28%), Positives = 60/142 (42%), Gaps = 8/142 (5%)

Query: 77  YLTAIRHCTEEIESTSSNHTKALARLLRATVYIFTSQSTKAIEDLTQLVEDTSVDPKIKV 136
           Y  AI  CTE I     +     A   R   Y+   Q  KA ED +  +     +PK   
Sbjct: 562 YDKAIADCTEGIRLAPKDEA---AYNNRCIAYLNLKQFQKASEDCSLTIGLNGNNPK--- 615

Query: 137 NAHIKRAVVHLHAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDK 196
            A+  R +  L A+ D   A  D  +A +++P+ A +Y  RG IY     Y  A+ +   
Sbjct: 616 -AYSNRGLARL-ASGDKQGAVEDFTQAIRLNPSDAVAYSNRGTIYSELKNYPLAVEDFAH 673

Query: 197 TIALNPNFHVARAQRHFVVHKM 218
           ++ LNP    A   R  V  ++
Sbjct: 674 SLRLNPKNASAFYSRGLVRRQL 695


>gi|27379691|ref|NP_771220.1| hypothetical protein blr4580 [Bradyrhizobium japonicum USDA 110]
 gi|27352843|dbj|BAC49845.1| blr4580 [Bradyrhizobium japonicum USDA 110]
          Length = 389

 Score = 63.5 bits (153), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 49/191 (25%), Positives = 90/191 (47%), Gaps = 7/191 (3%)

Query: 151 SDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQ 210
           +D+ +A AD D+A K+D   A +Y+ RG  Y   G+ + AL +LD  I L+PN+  A   
Sbjct: 156 NDYARALADYDQAIKLDRTFALAYFNRGTAYREHGEADRALADLDMAIKLDPNYGPAYGN 215

Query: 211 RHFVVHKMIVPGDRERVEQSLKEFRNFVDTHSNVVEACTLFAQVLVDQEDFDGAEEYFNR 270
           R  +       G+R R   +L +F   +    N        A +  D  D+  A E ++R
Sbjct: 216 RARIFRD---KGERAR---ALADFGKSLQLTPNNDRDAYARASMYFDDHDYARALEDYDR 269

Query: 271 SIRVDPENASLYVHRAMLMLQARGNVDEAIKLIEKAISIDKSCMFAYETLGTIEVQRGRL 330
           +I+ +   A ++  R M      G + EA+   E+++ +     +  ++     ++ G L
Sbjct: 270 AIKANASYAGVFNARCMTR-AILGQLQEALADCEQSLRMRPGDPYTLDSRALTYLKLGNL 328

Query: 331 EEAVKCFNKAL 341
           + A+  ++ AL
Sbjct: 329 DAAIADYDTAL 339



 Score = 48.5 bits (114), Expect = 0.008,   Method: Compositional matrix adjust.
 Identities = 26/77 (33%), Positives = 41/77 (53%)

Query: 463 SDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQ 522
           +D+ +A AD D+A K+D   A +Y+ RG  Y   G+ + AL +LD  I L+PN+  A   
Sbjct: 156 NDYARALADYDQAIKLDRTFALAYFNRGTAYREHGEADRALADLDMAIKLDPNYGPAYGN 215

Query: 523 RHFVWTSTLAELMAFSD 539
           R  ++        A +D
Sbjct: 216 RARIFRDKGERARALAD 232



 Score = 45.1 bits (105), Expect = 0.099,   Method: Compositional matrix adjust.
 Identities = 42/179 (23%), Positives = 79/179 (44%), Gaps = 7/179 (3%)

Query: 165 KVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQRHFVVHKMIVPGDR 224
           + +P+ A +   RG+I+   G  E AL +L++ I L+PN  +A   R      +   GDR
Sbjct: 68  QANPSNALALANRGEIFRRKGDAERALADLNRAIDLDPNDAIAWYNRGIAYDDL---GDR 124

Query: 225 ERVEQSLKEFRNFVDTHSNVVEACTLFAQVLVDQEDFDGAEEYFNRSIRVDPENASLYVH 284
              + ++ ++   +    N            + + D+  A   ++++I++D   A  Y +
Sbjct: 125 ---DHAIADYTRAIRLKPNDALYYNNRGNSYIGKNDYARALADYDQAIKLDRTFALAYFN 181

Query: 285 RAMLMLQARGNVDEAIKLIEKAISIDKSCMFAYETLGTIEVQRGRLEEAVKCFNKALPL 343
           R     +  G  D A+  ++ AI +D +   AY     I   +G    A+  F K+L L
Sbjct: 182 RGTAYRE-HGEADRALADLDMAIKLDPNYGPAYGNRARIFRDKGERARALADFGKSLQL 239



 Score = 44.3 bits (103), Expect = 0.18,   Method: Compositional matrix adjust.
 Identities = 34/113 (30%), Positives = 52/113 (46%), Gaps = 8/113 (7%)

Query: 419 YTQKMTSILNSNDYEIIPGDPTKTIEESEKYGNLENESG---QKHAASDFTKAFADLDEA 475
           Y  +  S +  NDY     D  + I+    +       G   ++H  +D  +A ADLD A
Sbjct: 145 YNNRGNSYIGKNDYARALADYDQAIKLDRTFALAYFNRGTAYREHGEAD--RALADLDMA 202

Query: 476 EKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFH---VARAQRHF 525
            K+DPN   +Y  R +I+   G+   AL +  K++ L PN      ARA  +F
Sbjct: 203 IKLDPNYGPAYGNRARIFRDKGERARALADFGKSLQLTPNNDRDAYARASMYF 255



 Score = 38.9 bits (89), Expect = 6.5,   Method: Compositional matrix adjust.
 Identities = 20/53 (37%), Positives = 29/53 (54%)

Query: 463 SDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPN 515
            D  +A ADL+ A  +DPN A ++Y RG  Y   G  + A+ +  + I L PN
Sbjct: 88  GDAERALADLNRAIDLDPNDAIAWYNRGIAYDDLGDRDHAIADYTRAIRLKPN 140


>gi|428310582|ref|YP_007121559.1| serine/threonine protein kinase [Microcoleus sp. PCC 7113]
 gi|428252194|gb|AFZ18153.1| serine/threonine protein kinase [Microcoleus sp. PCC 7113]
          Length = 628

 Score = 63.5 bits (153), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 45/165 (27%), Positives = 80/165 (48%), Gaps = 7/165 (4%)

Query: 185 GQYEEALRNLDKTIALNPNFHVARAQRHFVVHKMIVPGDRERVEQSLKEFRNFVDTHSNV 244
           G+Y+EAL   D+ IAL P F  A   R + ++K+      E+  +++    + +D     
Sbjct: 457 GKYQEALTFYDQAIALKPKFAEAYGGRCYCLNKL------EKFSEAMVACNDALDLKPKY 510

Query: 245 VEACTLFAQVLVDQEDFDGAEEYFNRSIRVDPENASLYVHRAMLMLQARGNVDEAIKLIE 304
            EA          Q+    A   + ++I   P+ A  +V R M +LQ+ G   EA+  ++
Sbjct: 511 PEAMWGKGNAYQQQKRLTKALALYEQAIIKKPKFAEAWVSRGM-VLQSLGRSYEALWAVD 569

Query: 305 KAISIDKSCMFAYETLGTIEVQRGRLEEAVKCFNKALPLARDEAE 349
           +AI ++++   A+ T G    + GR +EA+   +KAL L  +  E
Sbjct: 570 RAIDLERNSADAWTTKGEALWELGRWDEAIVALDKALELQPNHPE 614


>gi|159028889|emb|CAO90694.1| unnamed protein product [Microcystis aeruginosa PCC 7806]
          Length = 1271

 Score = 63.5 bits (153), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 51/187 (27%), Positives = 86/187 (45%), Gaps = 7/187 (3%)

Query: 162  EAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQRHFVVHKMIVP 221
            +A KVDP  A SY+  G +    GQ EEA+    + I   P++  A      V  ++   
Sbjct: 1023 QAIKVDPTYAKSYHNLGFLAAQQGQLEEAISYYQQAIESQPDYPSAFYNLGLVYEQL--- 1079

Query: 222  GDRERVEQSLKEFRNFVDTHSNVVEACTLFAQVLVDQEDFDGAEEYFNRSIRVDPENASL 281
               +  E+++  + + V   S  VE     AQ+   QE++  AE+Y+  ++ + P N  L
Sbjct: 1080 ---KETEKAIACYSHSVQLDSTNVEVYKSLAQLYDRQENYAKAEKYYRCALLLQPHNLEL 1136

Query: 282  YVHRAMLMLQARGNVDEAIKLIEKAISIDKSCMFAYETLGTIEVQRGRLEEAVKCFNKAL 341
              +  +++ + +   D+A+   +K I        AY  LG    Q+  L +A  CF KA+
Sbjct: 1137 RYNLGVVLYE-QEKFDKAVSCFQKIIQAKPQDAIAYLHLGISYKQQKLLTKAKSCFEKAI 1195

Query: 342  PLARDEA 348
             L  D A
Sbjct: 1196 ELDPDYA 1202



 Score = 38.9 bits (89), Expect = 6.2,   Method: Compositional matrix adjust.
 Identities = 59/247 (23%), Positives = 99/247 (40%), Gaps = 53/247 (21%)

Query: 274  VDPENASLYVHRAMLMLQARGNVDEAIKLIEKAISIDKSCMFAYETLGTIEVQRGRLEEA 333
            V  EN++ Y H+        G ++ A     +AI +D +   +Y  LG +  Q+G+LEEA
Sbjct: 992  VPEENSAAYYHQLGREKTLTGELESAKNFYLQAIKVDPTYAKSYHNLGFLAAQQGQLEEA 1051

Query: 334  VKCFNKALPLARDEAELSHIYSLRDAAIAQMKVCER------------------YNIKKK 375
            +  + +A+    D    S  Y+L      Q+K  E+                  Y    +
Sbjct: 1052 ISYYQQAIESQPDYP--SAFYNL-GLVYEQLKETEKAIACYSHSVQLDSTNVEVYKSLAQ 1108

Query: 376  VSPRSQNITKNEK-----LAIK----QLRENNDIIIRPADKGGKTVVMDKADYTQKMTSI 426
            +  R +N  K EK     L ++    +LR N  +++   +K  K V              
Sbjct: 1109 LYDRQENYAKAEKYYRCALLLQPHNLELRYNLGVVLYEQEKFDKAV-------------- 1154

Query: 427  LNSNDYEIIPGDPTKTIEESEKYGNLENESGQKHAASDFTKAFADLDEAEKVDPNVADSY 486
              S   +II   P   I     Y +L     Q+      TKA +  ++A ++DP+ A +Y
Sbjct: 1155 --SCFQKIIQAKPQDAI----AYLHLGISYKQQKL---LTKAKSCFEKAIELDPDYAMAY 1205

Query: 487  YQRGQIY 493
            Y  G +Y
Sbjct: 1206 YNLGVVY 1212


>gi|428778317|ref|YP_007170104.1| hypothetical protein PCC7418_3786 [Halothece sp. PCC 7418]
 gi|428692596|gb|AFZ45890.1| Tetratricopeptide TPR_1 repeat-containing protein [Halothece sp.
           PCC 7418]
          Length = 388

 Score = 63.5 bits (153), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 55/199 (27%), Positives = 88/199 (44%), Gaps = 27/199 (13%)

Query: 156 AFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQRHFVV 215
           A  D ++A K+D     +YYQRG  Y   G   +A  ++ + + LN  F   R    +  
Sbjct: 83  AIKDFNQAIKLDSKYERAYYQRGLTYQRQGNLIKAFADIQRALQLNDRFLQPRQAMAY-- 140

Query: 216 HKMIVPGDRERVEQSLKEFRNFVDTHSNVVEA--CTLFAQVLVDQEDFDGAEEYFNRSIR 273
                     ++ + LK  R        ++ A    L   +    EDFD A EY      
Sbjct: 141 ---------RKLARELK--RAIAHNQRGIIRAQKGNLAGAI----EDFDQALEYLG---- 181

Query: 274 VDPENASLYVHRAMLMLQARGNVDEAIKLIEKAISIDKSCMFAYETLGTIEVQRGRLEEA 333
               +A+ Y  R +   Q +GN+D+A+   E+AIS+ K    AY+  G    Q+G LE A
Sbjct: 182 ---NDAATYNKRGLAYAQ-QGNLDQALADFEEAISLAKDSALAYKNRGIAYFQKGELEAA 237

Query: 334 VKCFNKALPLARDEAELSH 352
           +  F +A+ L  ++A L +
Sbjct: 238 LSDFQQAIKLKPEDASLYY 256



 Score = 40.4 bits (93), Expect = 2.7,   Method: Compositional matrix adjust.
 Identities = 54/255 (21%), Positives = 103/255 (40%), Gaps = 24/255 (9%)

Query: 104 RATVYIFTSQSTKAIEDLTQLVE--DTSVDPKI-----KVNAHIKRAVVHLHAA------ 150
           R   Y       KA  D+ + ++  D  + P+      K+   +KRA+ H          
Sbjct: 104 RGLTYQRQGNLIKAFADIQRALQLNDRFLQPRQAMAYRKLARELKRAIAHNQRGIIRAQK 163

Query: 151 SDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQ 210
            +   A  D D+A +   N A +Y +RG  Y   G  ++AL + ++ I+L  +  +A   
Sbjct: 164 GNLAGAIEDFDQALEYLGNDAATYNKRGLAYAQQGNLDQALADFEEAISLAKDSALAYKN 223

Query: 211 RHFVVHKMIVPGDRERVEQSLKEFRNFVDTHSNVVEACTLFAQVLV--DQEDFDGAEEYF 268
           R     +      +  +E +L +F+  +       +A   + Q ++   Q   + A   +
Sbjct: 224 RGIAYFQ------KGELEAALSDFQQAIKLKPE--DASLYYKQGVIYHQQGKLEAAINTY 275

Query: 269 NRSIRVDPENASLYVHRAMLMLQARGNVDEAIKLIEKAISIDKSCMFAYETLGTIEVQRG 328
            +++  + EN    V+   L+   +GN+ +AI    +A  I +    +   L     Q+G
Sbjct: 276 QKALDRN-ENVWQAVNNLGLIAYQQGNISQAISYWRQATQISEKAAESKLALAVALYQQG 334

Query: 329 RLEEAVKCFNKALPL 343
           + E A      AL L
Sbjct: 335 KREPASALQETALRL 349



 Score = 38.9 bits (89), Expect = 7.8,   Method: Compositional matrix adjust.
 Identities = 66/295 (22%), Positives = 118/295 (40%), Gaps = 33/295 (11%)

Query: 238 VDTHSNVVEACTL---------FAQVLVDQEDFDGAEEYFNRSIRVDPENASLYVHRAML 288
           V     +V+ C L          A+    Q ++  A E ++ +IR  P++ + Y  R + 
Sbjct: 14  VSLSGVLVQGCFLKPPAIHYYQVAETKEKQGNYAEAIEVYDLAIRNYPDDPTPYYKRGIT 73

Query: 289 MLQARGNVDEAIKLIEKAISIDKSCMFAYETLGTIEVQRGRLEEAVKCFNKALPLARDEA 348
             + +G +  AIK   +AI +D     AY   G    ++G L +A     +AL       
Sbjct: 74  R-KKQGQLQLAIKDFNQAIKLDSKYERAYYQRGLTYQRQGNLIKAFADIQRAL------- 125

Query: 349 ELSHIYSLRDAAIAQMKVCERYNIKKKVSPRSQNITKNEKLAIKQLRENNDIIIRPADKG 408
           +L+  +     A+A  K+     +K+        I  N++  I+  + N    I   D+ 
Sbjct: 126 QLNDRFLQPRQAMAYRKLAR--ELKRA-------IAHNQRGIIRAQKGNLAGAIEDFDQA 176

Query: 409 GKTVVMDKADYTQKMTSILNSNDYEIIPGDPTKTI----EESEKYGNLENESGQKHAASD 464
            + +  D A Y ++  +     + +    D  + I    + +  Y N      QK    +
Sbjct: 177 LEYLGNDAATYNKRGLAYAQQGNLDQALADFEEAISLAKDSALAYKNRGIAYFQK---GE 233

Query: 465 FTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVA 519
              A +D  +A K+ P  A  YY++G IY   G+ E A+    K +  N N   A
Sbjct: 234 LEAALSDFQQAIKLKPEDASLYYKQGVIYHQQGKLEAAINTYQKALDRNENVWQA 288


>gi|428311655|ref|YP_007122632.1| hypothetical protein Mic7113_3500 [Microcoleus sp. PCC 7113]
 gi|428253267|gb|AFZ19226.1| TPR repeat-containing protein [Microcoleus sp. PCC 7113]
          Length = 847

 Score = 63.5 bits (153), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 47/189 (24%), Positives = 91/189 (48%), Gaps = 7/189 (3%)

Query: 155 KAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQRHFV 214
           +A A   +A K+DPN   +++ RG       +YEEAL + +K + LNPN  +    R   
Sbjct: 468 EALASFSKAIKLDPNEPIAWFNRGIALRCLERYEEALASFNKGLELNPNESITWRNRGAT 527

Query: 215 VHKMIVPGDRERVEQSLKEFRNFVDTHSNVVEACTLFAQVLVDQEDFDGAEEYFNRSIRV 274
           +      G+  R E +L  +   ++       A       L +   ++ A   ++++I +
Sbjct: 528 L------GNLGRHEDALISYDKAIELEPANANALINRGAALGNLGRYEEALVSYDKAIEL 581

Query: 275 DPENASLYVHRAMLMLQARGNVDEAIKLIEKAISIDKSCMFAYETLGTIEVQRGRLEEAV 334
           DP NA+  +++ ++  + R   +EA+   +KAI +D +    +   G +  Q  R +EA+
Sbjct: 582 DPTNANALINQGVVFSKLR-RYNEALVCADKAIELDPNYGLVWNYQGWVLGQLERYDEAL 640

Query: 335 KCFNKALPL 343
             ++KA+ L
Sbjct: 641 TSYDKAIEL 649



 Score = 60.5 bits (145), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 60/244 (24%), Positives = 109/244 (44%), Gaps = 20/244 (8%)

Query: 156 AFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQRHFVV 215
           A    D+A +++P  A++   RG      G+YEEAL + DK I L+P    A   +  V 
Sbjct: 537 ALISYDKAIELEPANANALINRGAALGNLGRYEEALVSYDKAIELDPTNANALINQGVVF 596

Query: 216 HKMIVPGDRERVEQSLKEFRNFVDTHSNVVEACTLFAQVLVDQEDFDGAEEYFNRSIRVD 275
            K+       R  ++L      ++   N          VL   E +D A   ++++I +D
Sbjct: 597 SKL------RRYNEALVCADKAIELDPNYGLVWNYQGWVLGQLERYDEALTSYDKAIELD 650

Query: 276 PENASLYVHRAMLMLQARGNVDEAIKLIEKAISIDKSCMFAYETLGTIEVQRGRLEEAVK 335
           P +A  + +R  L L   G+ DE ++  +KAI + +   F +       +   R E+ + 
Sbjct: 651 PTDADGWFNRGWL-LGELGSYDEGLESCDKAIELGEQSSFVFLNRAEYLLALNRWEDGIA 709

Query: 336 CFNKAL--------PLARDE-AELSHIY-SLRDAAIAQMKV---CERYNIKKKVSPRSQN 382
             +KAL        P   DE A + +++ S  DA+I + ++    E Y+  + +S   Q 
Sbjct: 710 ALDKALHRFAHADEPDTGDEKAIIRNLFKSTHDASIWRSRISTLIELYDKHQVISALGQG 769

Query: 383 ITKN 386
           + ++
Sbjct: 770 LVRS 773



 Score = 57.0 bits (136), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 64/264 (24%), Positives = 110/264 (41%), Gaps = 24/264 (9%)

Query: 265 EEYFNRSIRVDPENASLYVHRAMLM-----LQARGNVDEAIKLIEKAISIDKSCMFAYET 319
           EE F +++++  E  ++  H    +     L   G ++EA+    KAI +D +   A+  
Sbjct: 430 EENFAQALQIAQELVAIRGHIEDWLEQGYCLGVLGRIEEALASFSKAIKLDPNEPIAWFN 489

Query: 320 LGTIEVQRGRLEEAVKCFNKALPLARDEAELSHIYSLRDAAIAQMKVCE----RYNIKKK 375
            G       R EEA+  FNK L L  +E   S  +  R A +  +   E     Y+   +
Sbjct: 490 RGIALRCLERYEEALASFNKGLELNPNE---SITWRNRGATLGNLGRHEDALISYDKAIE 546

Query: 376 VSPRSQNITKNEKLAIKQLRENNDIIIRPADKGGKTVVMDKADYTQKMT-----SILNSN 430
           + P + N   N   A+  L    + ++       K + +D  +    +      S L   
Sbjct: 547 LEPANANALINRGAALGNLGRYEEALV----SYDKAIELDPTNANALINQGVVFSKLRRY 602

Query: 431 DYEIIPGDPTKTIEESEKYGNLENESGQKHAASD-FTKAFADLDEAEKVDPNVADSYYQR 489
           +  ++  D  K IE    YG + N  G      + + +A    D+A ++DP  AD ++ R
Sbjct: 603 NEALVCAD--KAIELDPNYGLVWNYQGWVLGQLERYDEALTSYDKAIELDPTDADGWFNR 660

Query: 490 GQIYCLFGQYEEALRNLDKTIALN 513
           G +    G Y+E L + DK I L 
Sbjct: 661 GWLLGELGSYDEGLESCDKAIELG 684



 Score = 53.1 bits (126), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 50/195 (25%), Positives = 90/195 (46%), Gaps = 15/195 (7%)

Query: 179 QIYCL--FGQYEEALRNLDKTIALNPNFHVARAQRHFVVHKMIVPGDRERVEQSLKEFRN 236
           Q YCL   G+ EEAL +  K I L+PN  +A   R   +  +      ER E++L  F  
Sbjct: 456 QGYCLGVLGRIEEALASFSKAIKLDPNEPIAWFNRGIALRCL------ERYEEALASFNK 509

Query: 237 FVDTHSNVVEACTLFAQVLVDQEDFDGAEEYFNRSIRVDPENASLYVHRAMLMLQARGNV 296
            ++ + N           L +    + A   ++++I ++P NA+  ++R    L   G  
Sbjct: 510 GLELNPNESITWRNRGATLGNLGRHEDALISYDKAIELEPANANALINRGA-ALGNLGRY 568

Query: 297 DEAIKLIEKAISIDKSCMFAYETLGTIEVQRGRLEEAVKCFNKALPLARDEAELSHIYSL 356
           +EA+   +KAI +D +   A    G +  +  R  EA+ C +KA+ L   +     +++ 
Sbjct: 569 EEALVSYDKAIELDPTNANALINQGVVFSKLRRYNEALVCADKAIEL---DPNYGLVWNY 625

Query: 357 RDAAIAQMKVCERYN 371
           +   + Q+   ERY+
Sbjct: 626 QGWVLGQL---ERYD 637



 Score = 40.0 bits (92), Expect = 3.2,   Method: Compositional matrix adjust.
 Identities = 20/57 (35%), Positives = 31/57 (54%)

Query: 467 KAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQR 523
           +A A   +A K+DPN   +++ RG       +YEEAL + +K + LNPN  +    R
Sbjct: 468 EALASFSKAIKLDPNEPIAWFNRGIALRCLERYEEALASFNKGLELNPNESITWRNR 524


>gi|440752107|ref|ZP_20931310.1| tetratricopeptide repeat family protein [Microcystis aeruginosa
            TAIHU98]
 gi|440176600|gb|ELP55873.1| tetratricopeptide repeat family protein [Microcystis aeruginosa
            TAIHU98]
          Length = 1254

 Score = 63.5 bits (153), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 51/187 (27%), Positives = 86/187 (45%), Gaps = 7/187 (3%)

Query: 162  EAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQRHFVVHKMIVP 221
            +A KVDP  A SY+  G +    GQ EEA+    + I   P++  A      V  ++   
Sbjct: 1006 QAIKVDPTYAKSYHNLGFLAAQQGQLEEAISYYQQAIESQPDYPSAFYNLGLVYEQL--- 1062

Query: 222  GDRERVEQSLKEFRNFVDTHSNVVEACTLFAQVLVDQEDFDGAEEYFNRSIRVDPENASL 281
               +  E+++  + + V   S  VE     AQ+   QE++  AE+Y+  ++ + P N  L
Sbjct: 1063 ---KETEKAIACYSHSVQLDSTNVEVYKSLAQLYDRQENYAKAEKYYRCALLLQPHNLEL 1119

Query: 282  YVHRAMLMLQARGNVDEAIKLIEKAISIDKSCMFAYETLGTIEVQRGRLEEAVKCFNKAL 341
              +  +++ + +   D+A+   +K I        AY  LG    Q+  L +A  CF KA+
Sbjct: 1120 RYNLGVVLYE-QEKFDKAVSCFQKIIQAKPQDAIAYLHLGISYKQQKLLTKAKSCFEKAI 1178

Query: 342  PLARDEA 348
             L  D A
Sbjct: 1179 ELDPDYA 1185



 Score = 38.9 bits (89), Expect = 6.6,   Method: Compositional matrix adjust.
 Identities = 59/247 (23%), Positives = 99/247 (40%), Gaps = 53/247 (21%)

Query: 274  VDPENASLYVHRAMLMLQARGNVDEAIKLIEKAISIDKSCMFAYETLGTIEVQRGRLEEA 333
            V  EN++ Y H+        G ++ A     +AI +D +   +Y  LG +  Q+G+LEEA
Sbjct: 975  VPEENSAAYYHQLGREKTLTGELESAKNFYLQAIKVDPTYAKSYHNLGFLAAQQGQLEEA 1034

Query: 334  VKCFNKALPLARDEAELSHIYSLRDAAIAQMKVCER------------------YNIKKK 375
            +  + +A+    D    S  Y+L      Q+K  E+                  Y    +
Sbjct: 1035 ISYYQQAIESQPDYP--SAFYNL-GLVYEQLKETEKAIACYSHSVQLDSTNVEVYKSLAQ 1091

Query: 376  VSPRSQNITKNEK-----LAIK----QLRENNDIIIRPADKGGKTVVMDKADYTQKMTSI 426
            +  R +N  K EK     L ++    +LR N  +++   +K  K V              
Sbjct: 1092 LYDRQENYAKAEKYYRCALLLQPHNLELRYNLGVVLYEQEKFDKAV-------------- 1137

Query: 427  LNSNDYEIIPGDPTKTIEESEKYGNLENESGQKHAASDFTKAFADLDEAEKVDPNVADSY 486
              S   +II   P   I     Y +L     Q+      TKA +  ++A ++DP+ A +Y
Sbjct: 1138 --SCFQKIIQAKPQDAI----AYLHLGISYKQQKL---LTKAKSCFEKAIELDPDYAMAY 1188

Query: 487  YQRGQIY 493
            Y  G +Y
Sbjct: 1189 YNLGVVY 1195


>gi|390450226|ref|ZP_10235819.1| hypothetical protein A33O_12119 [Nitratireductor aquibiodomus RA22]
 gi|389662574|gb|EIM74131.1| hypothetical protein A33O_12119 [Nitratireductor aquibiodomus RA22]
          Length = 282

 Score = 63.5 bits (153), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 53/182 (29%), Positives = 83/182 (45%), Gaps = 7/182 (3%)

Query: 168 PNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQRHFVVHKMIVPGDRERV 227
           PN  ++Y  RG  Y   G+Y++AL++ DK I+LNP      A R  ++H+    G+    
Sbjct: 64  PNEPEAYNMRGAAYGRAGRYQDALKDFDKAISLNPRSPNTYANRA-LIHRYT--GNN--- 117

Query: 228 EQSLKEFRNFVDTHSNVVEACTLFAQVLVDQEDFDGAEEYFNRSIRVDPENASLYVHRAM 287
           +Q+L ++   +    N   A    A++         A     R+I++D  +   Y  R +
Sbjct: 118 QQALADYNQAISLDPNYDTAYIGRAEIYRLSGRSTDALADLERAIQLDTTDPRAYYRRGL 177

Query: 288 LMLQARGNVDEAIKLIEKAISIDKSCMFAYETLGTIEVQRGRLEEAVKCFNKALPLARDE 347
           L  QA G    AI+   KAIS+     + Y   G   + +G  E A   FN A+ L  D 
Sbjct: 178 LY-QASGQHQFAIEDFAKAISLAPDAPYGYNGRGLSYLAQGDDENAFSDFNTAIRLDDDL 236

Query: 348 AE 349
           AE
Sbjct: 237 AE 238



 Score = 57.4 bits (137), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 46/174 (26%), Positives = 84/174 (48%), Gaps = 11/174 (6%)

Query: 104 RATVYIFTSQSTKAIEDLTQLVEDTSVDPKIKVNAHIKRAVVHLHAASDFTKAFADLDEA 163
           RA ++ +T  + +A+ D  Q +   S+DP     A+I RA ++  +    T A ADL+ A
Sbjct: 107 RALIHRYTGNNQQALADYNQAI---SLDPNYDT-AYIGRAEIYRLSGRS-TDALADLERA 161

Query: 164 EKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQRHFVVHKMIVPGD 223
            ++D     +YY+RG +Y   GQ++ A+ +  K I+L P+       R       +  GD
Sbjct: 162 IQLDTTDPRAYYRRGLLYQASGQHQFAIEDFAKAISLAPDAPYGYNGRGL---SYLAQGD 218

Query: 224 RERVEQSLKEFRNFVDTHSNVVEACTLFAQVLVDQEDFDGAEEYFNRSIRVDPE 277
               E +  +F   +    ++ E+    A V   + D   A + + R++++DPE
Sbjct: 219 D---ENAFSDFNTAIRLDDDLAESWANQALVYEKRGDKAKAAKSYARALQLDPE 269



 Score = 42.4 bits (98), Expect = 0.64,   Method: Compositional matrix adjust.
 Identities = 55/224 (24%), Positives = 83/224 (37%), Gaps = 67/224 (29%)

Query: 316 AYETLGTIEVQRGRLEEAVKCFNKALPLARDEAELSHIYSLRDAAIAQMKVCERYNIKKK 375
           AY   G    + GR ++A+K F+KA+ L                                
Sbjct: 69  AYNMRGAAYGRAGRYQDALKDFDKAISL-------------------------------- 96

Query: 376 VSPRSQNITKNEKLAIKQLRENNDIIIRPADKGGKTVVMDKADYTQKMTSILNSNDYEII 435
            +PRS N   N  L I +   NN   +              ADY Q ++         + 
Sbjct: 97  -NPRSPNTYANRAL-IHRYTGNNQQAL--------------ADYNQAIS---------LD 131

Query: 436 PGDPTKTIEESEKYGNLENESGQKHAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCL 495
           P   T  I  +E Y  L   S         T A ADL+ A ++D     +YY+RG +Y  
Sbjct: 132 PNYDTAYIGRAEIY-RLSGRS---------TDALADLERAIQLDTTDPRAYYRRGLLYQA 181

Query: 496 FGQYEEALRNLDKTIALNPNFHVARAQRHFVWTSTLAELMAFSD 539
            GQ++ A+ +  K I+L P+       R   + +   +  AFSD
Sbjct: 182 SGQHQFAIEDFAKAISLAPDAPYGYNGRGLSYLAQGDDENAFSD 225



 Score = 40.8 bits (94), Expect = 1.8,   Method: Compositional matrix adjust.
 Identities = 21/60 (35%), Positives = 31/60 (51%)

Query: 480 PNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQRHFVWTSTLAELMAFSD 539
           PN  ++Y  RG  Y   G+Y++AL++ DK I+LNP      A R  +   T     A +D
Sbjct: 64  PNEPEAYNMRGAAYGRAGRYQDALKDFDKAISLNPRSPNTYANRALIHRYTGNNQQALAD 123


>gi|115523543|ref|YP_780454.1| hypothetical protein RPE_1524 [Rhodopseudomonas palustris BisA53]
 gi|115517490|gb|ABJ05474.1| TPR repeat-containing protein [Rhodopseudomonas palustris BisA53]
          Length = 732

 Score = 63.5 bits (153), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 64/265 (24%), Positives = 115/265 (43%), Gaps = 36/265 (13%)

Query: 64  LLSKAKRAFEHEDYLTAIRHCTEEIESTSSNHTKALARLLRATVYIFTSQSTKAIEDLTQ 123
           +L KA   F+   +     H +  +E+   N  +AL         +    S  A  D+  
Sbjct: 61  VLKKAPNNFQALHFYALAEHQSGHLETGIRNLKRAL---------LIDPNSAPAHSDMAN 111

Query: 124 LVEDT--------------SVDPKIKVNAHIKRA--VVHLHAASDFTKAFADLDEAEKVD 167
           ++ D               ++DPK+ V AH  R   ++HL    D   A A LD+A  +D
Sbjct: 112 MMIDANRFEEALKSCDKAIALDPKL-VLAHHNRGHTLLHLERLED---AVASLDDALALD 167

Query: 168 PNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQRHFVVHKMIVPGDRERV 227
           PN ADS+  RG       +Y+EAL +  K IA++P   +A   R     ++      +R+
Sbjct: 168 PNRADSWNDRGNSLQKLARYDEALESYAKAIAIDPLHDMAYMNRASTFKEL------KRL 221

Query: 228 EQSLKEFRNFVDTHSNVVEACTLFAQVLVDQEDFDGAEEYFNRSIRVDPENASLYVHRAM 287
           + +L  +   +      VEA    A++L+++++   A +     + ++P + S       
Sbjct: 222 DDALASYDRALSIGKRPVEAGICRAEILLNKKNVKDAMQTVTAVLNIEPNSVSGLTLLGN 281

Query: 288 LMLQARGNVDEAIKLIEKAISIDKS 312
            M  + G+ + AI L  +A++I  S
Sbjct: 282 CM-ASLGDAETAIALYSRALAIAPS 305



 Score = 44.3 bits (103), Expect = 0.15,   Method: Compositional matrix adjust.
 Identities = 28/74 (37%), Positives = 37/74 (50%), Gaps = 4/74 (5%)

Query: 468 AFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQRHFVW 527
           A A LD+A  +DPN ADS+  RG       +Y+EAL +  K IA++P   +A   R    
Sbjct: 156 AVASLDDALALDPNRADSWNDRGNSLQKLARYDEALESYAKAIAIDPLHDMAYMNR---- 211

Query: 528 TSTLAELMAFSDEF 541
            ST  EL    D  
Sbjct: 212 ASTFKELKRLDDAL 225



 Score = 42.0 bits (97), Expect = 0.76,   Method: Compositional matrix adjust.
 Identities = 25/82 (30%), Positives = 44/82 (53%), Gaps = 1/82 (1%)

Query: 268 FNRSIRVDPENASLYVHRAMLMLQARGNVDEAIKLIEKAISIDKSCMFAYETLGTIEVQR 327
             R++ +DP +A  +   A +M+ A    +EA+K  +KAI++D   + A+   G   +  
Sbjct: 92  LKRALLIDPNSAPAHSDMANMMIDAN-RFEEALKSCDKAIALDPKLVLAHHNRGHTLLHL 150

Query: 328 GRLEEAVKCFNKALPLARDEAE 349
            RLE+AV   + AL L  + A+
Sbjct: 151 ERLEDAVASLDDALALDPNRAD 172


>gi|333986764|ref|YP_004519371.1| hypothetical protein MSWAN_0532 [Methanobacterium sp. SWAN-1]
 gi|333824908|gb|AEG17570.1| Tetratricopeptide TPR_1 repeat-containing protein [Methanobacterium
           sp. SWAN-1]
          Length = 529

 Score = 63.5 bits (153), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 57/238 (23%), Positives = 104/238 (43%), Gaps = 44/238 (18%)

Query: 148 HAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVA 207
            + + F  A    +EA ++DPN A +++ +G       + EE L+ LD  I L+P   + 
Sbjct: 178 QSLTGFNNALEFANEALELDPNYALAWHIKGGALIGMAKPEEGLKCLDNAIELDPELGLP 237

Query: 208 RAQRHFVVHKMIVPGDRERV----EQSLK-EFRNFVDTHSNVVEACTLFAQVLVDQEDFD 262
              +  V  K+   G  E       ++LK   +NF + H +++    +   +L +   + 
Sbjct: 238 WYGKGLVSQKL---GKYEEAIDYYNKALKLGLKNFDNLHVDILYRKGI---ILTELGKYK 291

Query: 263 GAEEYFNRSIRVDPENASLYVHRAM--LML----QARGNVDEAIKL-------------- 302
            A   F++++++DP    ++  R M  LML    +A G  D+A+K+              
Sbjct: 292 AAIGPFDKALKIDPNFVDVWTARGMVSLMLNKSEEALGYYDKALKVDPQNFGAFMGKYMA 351

Query: 303 -------------IEKAISIDKSCMFAYETLGTIEVQRGRLEEAVKCFNKALPLARDE 347
                        ++K + I+      + + G +  Q GR EEA+ C NKAL L + E
Sbjct: 352 LMDLDKHQESLEYLDKVLEIESQQASLWASRGILLNQLGRYEEAIICLNKALKLDQKE 409



 Score = 62.0 bits (149), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 52/210 (24%), Positives = 89/210 (42%), Gaps = 44/210 (20%)

Query: 137 NAHIK---RAVVHLHAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRN 193
           N H+    R  + L     +  A    D+A K+DPN  D +  RG +  +  + EEAL  
Sbjct: 271 NLHVDILYRKGIILTELGKYKAAIGPFDKALKIDPNFVDVWTARGMVSLMLNKSEEALGY 330

Query: 194 LDKTIALNPNFHVARAQRHFVVHKMIVPGDRERVEQSLKEFRNFVDTHSNVVEACTLFAQ 253
            DK + ++P                             + F  F+  +            
Sbjct: 331 YDKALKVDP-----------------------------QNFGAFMGKY-----------M 350

Query: 254 VLVDQEDFDGAEEYFNRSIRVDPENASLYVHRAMLMLQARGNVDEAIKLIEKAISIDKSC 313
            L+D +    + EY ++ + ++ + ASL+  R +L+ Q  G  +EAI  + KA+ +D+  
Sbjct: 351 ALMDLDKHQESLEYLDKVLEIESQQASLWASRGILLNQL-GRYEEAIICLNKALKLDQKE 409

Query: 314 MFAYETLGTIEVQRGRLEEAVKCFNKALPL 343
             A++T G   V+  R EEA+K   +AL L
Sbjct: 410 PRAWKTKGKSLVRLKRPEEALKSLEEALKL 439



 Score = 45.4 bits (106), Expect = 0.073,   Method: Compositional matrix adjust.
 Identities = 57/260 (21%), Positives = 104/260 (40%), Gaps = 43/260 (16%)

Query: 261 FDGAEEYFNRSIRVDPENASLYVHRAMLMLQARGNVDEAIKLIEKAISIDKSCMFAYETL 320
           F+ A E+ N ++ +DP N +L  H     L      +E +K ++ AI +D      +   
Sbjct: 183 FNNALEFANEALELDP-NYALAWHIKGGALIGMAKPEEGLKCLDNAIELDPELGLPWYGK 241

Query: 321 GTIEVQRGRLEEAVKCFNKALPLARDEAELSHIYSLRDAAIAQMKVCERYNIKKKVSPRS 380
           G +  + G+ EEA+  +NKAL L     +  H+  L    I    + E    K  + P  
Sbjct: 242 GLVSQKLGKYEEAIDYYNKALKLGLKNFDNLHVDILYRKGII---LTELGKYKAAIGPFD 298

Query: 381 QNITKNEKLAIKQLRENNDIIIRPADKGGKTVVMDKAD----YTQKMTSILNSNDYEIIP 436
                      K L+ + + +     +G  +++++K++    Y  K   +          
Sbjct: 299 -----------KALKIDPNFVDVWTARGMVSLMLNKSEEALGYYDKALKV---------- 337

Query: 437 GDPTKTIEESEKYGNLENESGQKHAASDFTK---AFADLDEAEKVDPNVADSYYQRGQIY 493
            DP           N     G+  A  D  K   +   LD+  +++   A  +  RG + 
Sbjct: 338 -DPQ----------NFGAFMGKYMALMDLDKHQESLEYLDKVLEIESQQASLWASRGILL 386

Query: 494 CLFGQYEEALRNLDKTIALN 513
              G+YEEA+  L+K + L+
Sbjct: 387 NQLGRYEEAIICLNKALKLD 406


>gi|158521101|ref|YP_001528971.1| hypothetical protein Dole_1087 [Desulfococcus oleovorans Hxd3]
 gi|158509927|gb|ABW66894.1| Tetratricopeptide TPR_2 repeat protein [Desulfococcus oleovorans
           Hxd3]
          Length = 808

 Score = 63.5 bits (153), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 59/219 (26%), Positives = 102/219 (46%), Gaps = 11/219 (5%)

Query: 155 KAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQRHFV 214
           +A A    A  +DP +A +++  G+I    G+ +EA    +KT+ L P+   AR     +
Sbjct: 92  EAAAAFQRAVSLDPGLAQAHFNLGKISKAAGRADEAKTFFEKTLNLAPHHLAARNNLGNL 151

Query: 215 VHKMIVPGDRERVEQSLKEFRNFVDTHSNVVEACTLFAQVLVDQEDFDGAEEYFNRSIRV 274
           + +    GD    + +L  F   +  +    EA      +   +E+ + A  Y+ ++I  
Sbjct: 152 LQQA---GDN---DGALACFEAVLKINPRQAEAHYNIGNIHKLREEVEPAARYYEQAIAC 205

Query: 275 DPENASLYVHRAMLMLQARGNVDEAIKLIEKAISIDKSCMFAYETLGTIEVQRGRLEEAV 334
           +P     Y+  A + L  R N D A  LI KA+ +D     A   L  + ++ GR+EEAV
Sbjct: 206 NPGFVPPYIGLARIHLANRRN-DLAESLIRKALRMDPKNGEALSELANLYLREGRIEEAV 264

Query: 335 KCFNKALPLARDEAE----LSHIYSLRDAAIAQMKVCER 369
             F  A+ ++ ++AE    L+  YS+R A    M   E+
Sbjct: 265 PVFLAAIRVSPEKAELHGALATAYSIRGATSQAMASFEK 303



 Score = 54.3 bits (129), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 54/206 (26%), Positives = 89/206 (43%), Gaps = 15/206 (7%)

Query: 147 LHAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNF-- 204
           L  A D   A A  +   K++P  A+++Y  G I+ L  + E A R  ++ IA NP F  
Sbjct: 152 LQQAGDNDGALACFEAVLKINPRQAEAHYNIGNIHKLREEVEPAARYYEQAIACNPGFVP 211

Query: 205 -HVARAQRHFVVHKMIVPGDRERVEQSLKEFRNFVDTHSNVVEACTLFAQVLVDQEDFDG 263
            ++  A+ H           R  + +SL   R  +       EA +  A + + +   + 
Sbjct: 212 PYIGLARIHLA-------NRRNDLAESL--IRKALRMDPKNGEALSELANLYLREGRIEE 262

Query: 264 AEEYFNRSIRVDPENASLYVHRAMLMLQA-RGNVDEAIKLIEKAISIDKSCMFAYETLGT 322
           A   F  +IRV PE A L  H A+    + RG   +A+   EKA+ +D        + G 
Sbjct: 263 AVPVFLAAIRVSPEKAEL--HGALATAYSIRGATSQAMASFEKALELDPDSARTRFSYGN 320

Query: 323 IEVQRGRLEEAVKCFNKALPLARDEA 348
           +    G  E A++ + + + L  D A
Sbjct: 321 LLESSGNREGALEAYRRVMALDPDFA 346



 Score = 52.4 bits (124), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 67/282 (23%), Positives = 124/282 (43%), Gaps = 32/282 (11%)

Query: 251 FAQVLVDQEDFDGAEEYFNRSIRVDPENASLYVHRAMLMLQARGNVDEAIKLIEKAISID 310
             QVL+ +   D A   F R++ +DP  A  + +   +  +A G  DEA    EK +++ 
Sbjct: 80  LGQVLLKKGQTDEAAAAFQRAVSLDPGLAQAHFNLGKIS-KAAGRADEAKTFFEKTLNLA 138

Query: 311 KSCMFAYETLGTIEVQRGRLEEAVKCFNKALPLARDEAE----LSHIYSLRDAAIAQMKV 366
              + A   LG +  Q G  + A+ CF   L +   +AE    + +I+ LR+    +++ 
Sbjct: 139 PHHLAARNNLGNLLQQAGDNDGALACFEAVLKINPRQAEAHYNIGNIHKLRE----EVEP 194

Query: 367 CERYNIKKKVSPRSQNITKNEKLA-IKQLRENNDI---IIRPADKGGKTVVMDKADYTQK 422
             RY  ++ ++     +     LA I      ND+   +IR      K + MD  +  + 
Sbjct: 195 AARY-YEQAIACNPGFVPPYIGLARIHLANRRNDLAESLIR------KALRMDPKN-GEA 246

Query: 423 MTSILN-----SNDYEIIP---GDPTKTIEESEKYGNLENESGQKHAASDFTKAFADLDE 474
           ++ + N         E +P        + E++E +G L      + A S   +A A  ++
Sbjct: 247 LSELANLYLREGRIEEAVPVFLAAIRVSPEKAELHGALATAYSIRGATS---QAMASFEK 303

Query: 475 AEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNF 516
           A ++DP+ A + +  G +    G  E AL    + +AL+P+F
Sbjct: 304 ALELDPDSARTRFSYGNLLESSGNREGALEAYRRVMALDPDF 345



 Score = 51.6 bits (122), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 30/111 (27%), Positives = 55/111 (49%), Gaps = 1/111 (0%)

Query: 234 FRNFVDTHSNVVEACTLFAQVLVDQEDFDGAEEYFNRSIRVDPENASLYVHRAMLMLQAR 293
           +R+ +  + N  +A  L   ++  ++D   AE    +++   P+ A+ +     ++L+ +
Sbjct: 29  YRDLLRENPNHADALHLLGTIMAAKKDLVAAEGTLRKAVEKAPKQAAFHNSLGQVLLK-K 87

Query: 294 GNVDEAIKLIEKAISIDKSCMFAYETLGTIEVQRGRLEEAVKCFNKALPLA 344
           G  DEA    ++A+S+D     A+  LG I    GR +EA   F K L LA
Sbjct: 88  GQTDEAAAAFQRAVSLDPGLAQAHFNLGKISKAAGRADEAKTFFEKTLNLA 138


>gi|440680240|ref|YP_007155035.1| Tetratricopeptide TPR_1 repeat-containing protein [Anabaena
           cylindrica PCC 7122]
 gi|428677359|gb|AFZ56125.1| Tetratricopeptide TPR_1 repeat-containing protein [Anabaena
           cylindrica PCC 7122]
          Length = 277

 Score = 63.2 bits (152), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 58/227 (25%), Positives = 102/227 (44%), Gaps = 23/227 (10%)

Query: 14  ISKRSFFKPSKQFIKTYLKSFPNDPILQPD--GLSNGVELTNGDTNESHELDLLSKAKRA 71
           I++RS  K    F+   L    + P++     G++   EL  GD       +L +KA  A
Sbjct: 5   ITERSMIKLICIFLSLLLVFGWSTPVMAQSSIGITTQEELQQGD-------ELATKAFVA 57

Query: 72  FEHEDYLTAIRHCTEEIESTSSNHTKALARLLRATVYIFTSQSTKAIEDLTQLVEDTSVD 131
               D+ TA  + TE IE   +N   A A   R    +  ++   A+ D  + VE   + 
Sbjct: 58  TNQGDFATAENYWTEIIEKFPTN---AGAWSNRGNSRVSQNKLAAALTDYNKAVE---LA 111

Query: 132 PKIKVNAHIKRAVVHLHAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEAL 191
           P +  + ++ R    L     + +A AD +   ++DPN A +Y  RG      G++E A+
Sbjct: 112 PNV-TDPYLNRGTA-LEGLGRWEEAIADYNHVLELDPNDAMAYNNRGNAKTGLGKWESAI 169

Query: 192 RNLDKTIALNPNFHVARAQRHFVVHKMIVPGDRERVEQSLKEFRNFV 238
            +  K   + PNF  ARA     ++      +  +++++++E RN V
Sbjct: 170 ADYQKATEIAPNFAFARANYALALY------ETNQIDKAIREMRNIV 210



 Score = 41.6 bits (96), Expect = 1.00,   Method: Compositional matrix adjust.
 Identities = 26/91 (28%), Positives = 41/91 (45%), Gaps = 7/91 (7%)

Query: 433 EIIPGDPTKTIEESEKYGNLENESGQKHAASDFTKAFADLDEAEKVDPNVADSYYQRGQI 492
           EII   PT         G   N    + + +    A  D ++A ++ PNV D Y  RG  
Sbjct: 72  EIIEKFPTNA-------GAWSNRGNSRVSQNKLAAALTDYNKAVELAPNVTDPYLNRGTA 124

Query: 493 YCLFGQYEEALRNLDKTIALNPNFHVARAQR 523
               G++EEA+ + +  + L+PN  +A   R
Sbjct: 125 LEGLGRWEEAIADYNHVLELDPNDAMAYNNR 155



 Score = 41.2 bits (95), Expect = 1.6,   Method: Compositional matrix adjust.
 Identities = 20/57 (35%), Positives = 31/57 (54%)

Query: 465 FTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARA 521
           + +A AD +   ++DPN A +Y  RG      G++E A+ +  K   + PNF  ARA
Sbjct: 131 WEEAIADYNHVLELDPNDAMAYNNRGNAKTGLGKWESAIADYQKATEIAPNFAFARA 187


>gi|289191967|ref|YP_003457908.1| TPR repeat-containing protein [Methanocaldococcus sp. FS406-22]
 gi|288938417|gb|ADC69172.1| TPR repeat-containing protein [Methanocaldococcus sp. FS406-22]
          Length = 314

 Score = 63.2 bits (152), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 53/221 (23%), Positives = 102/221 (46%), Gaps = 15/221 (6%)

Query: 124 LVEDTSVDPKIKVNAHIKRAVVHLHAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCL 183
           L E  S+DPK  +  ++K  ++ +    D       +++ EK+D N   S      + CL
Sbjct: 30  LDEVLSLDPKNTLVLYVKGIILKIMGDMD-----KSMEQFEKIDNNKEKSPLSWTNLICL 84

Query: 184 F---GQYEEALRNLDKTIALNPNFHVARAQRHFVVHKMIVPGDRERVEQSLKEFRNFVDT 240
               G YE+ L+ +DK   ++   +++        HK ++  +  + E+ LK F   +  
Sbjct: 85  NFVKGDYEKTLKYIDKLSKISSKCYLSP------FHKALIFIELGKYEEVLKYFDELLKV 138

Query: 241 HSNVVEACTLFAQVLVDQEDFDGAEEYFNRSIRVDPENASLYVHRAMLMLQARGNVDEAI 300
           +  +       A +L D    + A E  +R I ++  +   +  +   ML+  GN  EA+
Sbjct: 139 NDKLSSIWRQKAILLGDLGRLNEALECLDRVIEINKNDTYAWYLKGK-MLKKLGNYKEAL 197

Query: 301 KLIEKAISIDKSCMFAYETLGTIEVQRGRLEEAVKCFNKAL 341
           K +  AI ++K  +  Y+ +G +E+  G  +EA+K  +K L
Sbjct: 198 KCLYTAIGLNKDWIHTYKDIGYLELLSGNYDEALKYLSKYL 238



 Score = 48.9 bits (115), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 64/321 (19%), Positives = 130/321 (40%), Gaps = 56/321 (17%)

Query: 62  LDLLSKAKRAFEHED---YLTAIRHCTEEIESTSSNHTKALARLLRATVYIFTSQSTKAI 118
           L++L    +A E  D   +  AI+ C +E+ S    +T  L   ++  +        K++
Sbjct: 5   LEILKNVIKAIEFSDKGEFENAIK-CLDEVLSLDPKNT--LVLYVKGIILKIMGDMDKSM 61

Query: 119 EDLTQLVEDTSVDPKIKVNAHIKRAVVHLHAASDFTKAFADLDEAEKVDPNVADSYYQRG 178
           E   ++  +    P    N      +       D+ K    +D+  K+      S + + 
Sbjct: 62  EQFEKIDNNKEKSPLSWTNL-----ICLNFVKGDYEKTLKYIDKLSKISSKCYLSPFHKA 116

Query: 179 QIYCLFGQYEEALRNLDKTIALNPNFHVARAQRHFVVHKMIVPGDRERVEQSLKEFRNFV 238
            I+   G+YEE L+  D+ + +N        Q      K I+ GD  R+ ++L+     +
Sbjct: 117 LIFIELGKYEEVLKYFDELLKVNDKLSSIWRQ------KAILLGDLGRLNEALECLDRVI 170

Query: 239 DTHSNVVEACTLFAQVL----------------------------------VDQEDFDGA 264
           + + N   A  L  ++L                                  +   ++D A
Sbjct: 171 EINKNDTYAWYLKGKMLKKLGNYKEALKCLYTAIGLNKDWIHTYKDIGYLELLSGNYDEA 230

Query: 265 EEYFNRSIRVDPENASLYVHRAMLMLQARGNVDEAIKLIEKAISIDKSCMFAYETL---- 320
            +Y ++ ++  PE+     ++A L+ +    +D+A+K+ ++ IS  K   F +++     
Sbjct: 231 LKYLSKYLQKFPEDIEAKFYKA-LVYEHLNKLDDALKIYDEIISKLKDNNFIFKSSLINK 289

Query: 321 GTIEVQRGRLEEAVKCFNKAL 341
             I  + G++EEAV+ +NKAL
Sbjct: 290 ARILEKLGKIEEAVETYNKAL 310


>gi|411120171|ref|ZP_11392547.1| tetratricopeptide repeat protein [Oscillatoriales cyanobacterium
           JSC-12]
 gi|410710327|gb|EKQ67838.1| tetratricopeptide repeat protein [Oscillatoriales cyanobacterium
           JSC-12]
          Length = 272

 Score = 63.2 bits (152), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 45/202 (22%), Positives = 88/202 (43%), Gaps = 7/202 (3%)

Query: 145 VHLHAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNF 204
           ++L+   D+  A A  D      P+  D++Y RG  +   G YEEA+ + D+ +   P F
Sbjct: 17  LYLNRQHDYVAAIASYDAVLNRQPDYPDAWYNRGNAFYRLGHYEEAIASYDQALEYEPGF 76

Query: 205 HVARAQRHFVVHKMIVPGDRERVEQSLKEFRNFVDTHSNVVEACTLFAQVLVDQEDFDGA 264
             A   R   +       D +R  +++  +   +    +   A       L +   ++ A
Sbjct: 77  SEAWNNRGSALD------DLQRYAEAIASYDQAIKFKPSYCWAWYNRGIALRNLNRYEEA 130

Query: 265 EEYFNRSIRVDPENASLYVHRAMLMLQARGNVDEAIKLIEKAISIDKSCMFAYETLGTIE 324
            + ++R+I   P+    + +RA+++ Q  G + + +   +KA+        A+   G   
Sbjct: 131 IDSYDRAIEFKPDYYWAWYNRALVLKQL-GRLQQVVASYDKALEFKPDFEEAWTNRGNAL 189

Query: 325 VQRGRLEEAVKCFNKALPLARD 346
              G+LE A+  ++KAL L  D
Sbjct: 190 YHLGQLEAAISSYDKALELRPD 211



 Score = 40.4 bits (93), Expect = 2.4,   Method: Compositional matrix adjust.
 Identities = 19/60 (31%), Positives = 28/60 (46%)

Query: 464 DFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQR 523
           D+  A A  D      P+  D++Y RG  +   G YEEA+ + D+ +   P F  A   R
Sbjct: 24  DYVAAIASYDAVLNRQPDYPDAWYNRGNAFYRLGHYEEAIASYDQALEYEPGFSEAWNNR 83


>gi|398824104|ref|ZP_10582449.1| tetratricopeptide repeat protein,tetratricopeptide repeat protein
           [Bradyrhizobium sp. YR681]
 gi|398225243|gb|EJN11520.1| tetratricopeptide repeat protein,tetratricopeptide repeat protein
           [Bradyrhizobium sp. YR681]
          Length = 461

 Score = 63.2 bits (152), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 69/283 (24%), Positives = 117/283 (41%), Gaps = 16/283 (5%)

Query: 268 FNRSIRVDPENASLYVHRAMLMLQARGNVDEAIKLIEKAISIDKSCMFAYETLGTIEVQR 327
            +R+I +D +NA  +  R  L+ +A G++  A   + KAI +D     AYE  G +   +
Sbjct: 95  IDRAITLDGKNAKAWRLRGDLLREAGGDLGRAAADLSKAIELDAEDAEAYELRGVVYTNQ 154

Query: 328 GRLEEAVKCFNKALPLARDEAELSHIYSLRDA----AIAQMKVCERYNIKKKVSPRSQNI 383
            RLE A+  +++A+ L  D A+    +S R A         K     +   ++ P     
Sbjct: 155 RRLERALADYDRAIKLKPDYAQ---AWSDRGATYYLGGDNEKAIRDLSEALRLDPNRARS 211

Query: 384 TKNEKLAIKQLRENNDIIIRPADKGGKTVVMDKAD--YTQKMTSILNSNDYEIIPGDPTK 441
             N   A K+L + +  +   AD G    +  K    Y  +  S+     Y+    D  +
Sbjct: 212 YTNRGAAYKKLGQLDKSV---ADDGEAIRLDPKVPEYYDNRGLSLAAMGKYDEAIADYDQ 268

Query: 442 TIEESEKYGNLENESGQKHAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEE 501
            +  + K     N         +   A  D + A K+DPN A +Y  R  +Y   G+  +
Sbjct: 269 ALRLAPKPNFFTNRGDSYQLKGELGAALGDYESALKLDPNFAQTYNNRAVLYKKMGERRK 328

Query: 502 ALRNLDKTIALNPNFHVARAQRHFVWTSTLAELMAFSDEFMIP 544
           AL + +  + L+P    A A R     + +AE+  F  E   P
Sbjct: 329 ALADYETALKLDPGNDNAAAGRR----TMIAEIAKFGAEPPRP 367



 Score = 52.4 bits (124), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 71/285 (24%), Positives = 118/285 (41%), Gaps = 58/285 (20%)

Query: 116 KAIEDLTQLVEDTSVDPKIKVNAHIKRAVVHLHAASDFTKAFADLDEAEKVDPNVADSYY 175
           +A  DL++ +E  + D      A+  R VV+ +      +A AD D A K+ P+ A ++ 
Sbjct: 125 RAAADLSKAIELDAED----AEAYELRGVVYTNQ-RRLERALADYDRAIKLKPDYAQAWS 179

Query: 176 QRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQRHFVVHKMIVPGDRERVEQSLKEFR 235
            RG  Y L G  E+A+R+L + + L+PN    RA+                         
Sbjct: 180 DRGATYYLGGDNEKAIRDLSEALRLDPN----RAR------------------------- 210

Query: 236 NFVDTHSNVVEACTLFAQVLVDQEDFDGAEEYFNRSIRVDPENASLYVHRAMLMLQARGN 295
               +++N   A     Q  +D+   D  E     +IR+DP+    Y +R  L L A G 
Sbjct: 211 ----SYTNRGAAYKKLGQ--LDKSVADDGE-----AIRLDPKVPEYYDNRG-LSLAAMGK 258

Query: 296 VDEAIKLIEKAISIDKSCMFAYETLGTIEVQRGRLEEAVKCFNKALPLARDEAELSHIYS 355
            DEAI   ++A+ +     F +   G     +G L  A+  +  AL L   +   +  Y+
Sbjct: 259 YDEAIADYDQALRLAPKPNF-FTNRGDSYQLKGELGAALGDYESALKL---DPNFAQTYN 314

Query: 356 LRDAAIAQMKVCER------YNIKKKVSPRSQNITKNEKLAIKQL 394
            R  A+   K+ ER      Y    K+ P + N     +  I ++
Sbjct: 315 NR--AVLYKKMGERRKALADYETALKLDPGNDNAAAGRRTMIAEI 357



 Score = 46.2 bits (108), Expect = 0.050,   Method: Compositional matrix adjust.
 Identities = 50/228 (21%), Positives = 96/228 (42%), Gaps = 8/228 (3%)

Query: 118 IEDLTQLVEDTSVDPKIKVNAHIKRAVVHLHAASDFTKAFADLDEAEKVDPNVADSYYQR 177
           I   + +V+ T+     +  A + RA      +   T+A  D+D A  +D   A ++  R
Sbjct: 53  ITACSAIVDQTANPSSDRAAALLVRADASARISGGLTQALRDIDRAITLDGKNAKAWRLR 112

Query: 178 GQIYC-LFGQYEEALRNLDKTIALNPNFHVARAQRHFVVHKMIVPGDRERVEQSLKEFRN 236
           G +     G    A  +L K I L+     A   R  V        ++ R+E++L ++  
Sbjct: 113 GDLLREAGGDLGRAAADLSKAIELDAEDAEAYELRGVVYT------NQRRLERALADYDR 166

Query: 237 FVDTHSNVVEACTLFAQVLVDQEDFDGAEEYFNRSIRVDPENASLYVHRAMLMLQARGNV 296
            +    +  +A +          D + A    + ++R+DP  A  Y +R     +  G +
Sbjct: 167 AIKLKPDYAQAWSDRGATYYLGGDNEKAIRDLSEALRLDPNRARSYTNRGA-AYKKLGQL 225

Query: 297 DEAIKLIEKAISIDKSCMFAYETLGTIEVQRGRLEEAVKCFNKALPLA 344
           D+++    +AI +D      Y+  G      G+ +EA+  +++AL LA
Sbjct: 226 DKSVADDGEAIRLDPKVPEYYDNRGLSLAAMGKYDEAIADYDQALRLA 273


>gi|354565710|ref|ZP_08984884.1| Tetratricopeptide TPR_1 repeat-containing protein [Fischerella sp.
           JSC-11]
 gi|353548583|gb|EHC18028.1| Tetratricopeptide TPR_1 repeat-containing protein [Fischerella sp.
           JSC-11]
          Length = 846

 Score = 63.2 bits (152), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 75/384 (19%), Positives = 156/384 (40%), Gaps = 38/384 (9%)

Query: 147 LHAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHV 206
           LH +  + +A    D+A  + P++  ++Y RG      G+ +EA+ + DK +A+ P++H 
Sbjct: 457 LHLSGCYEEAVDSYDQALAIKPDLDQAWYNRGIALYFLGRDQEAVISYDKALAIKPDYHQ 516

Query: 207 ARAQRHFVVHKMIVPGDRERVEQSLKEFRNFVDTHSNVVEACTLFAQVLVDQEDFDGAEE 266
           A   R   +  +       R E+++  +   +    +  +A       L   + +D A  
Sbjct: 517 AYYSRCQALENL------GRYEEAVASYEQVLALKPDHYQAWYHKGNALYALKHYDEAVT 570

Query: 267 YFNRSIRVDPENASLYVHRAMLMLQARGNVDEAIKLIEKAISIDKSCMFAYETLGTIEVQ 326
            +++++ + P+    + +   ++L   G  +E ++  EK +        A+  +G     
Sbjct: 571 SYDQALALKPDYYQAW-YNGSVVLYLLGLYEEVVRSCEKVVEFKPEHYQAWYNMGNALYF 629

Query: 327 RGRLEEAVKCFNKALPLA--RDEAELSHIYSLRDAAIAQMKV--CERYNIKKKVSPRSQN 382
            G  EEAV  ++K L +    D+A  +   +L      Q  V  C++      ++P    
Sbjct: 630 LGHYEEAVAAYDKVLLIKPDYDQAWYNRSIALYPLGFYQEVVASCDK---AVAIAPDHYK 686

Query: 383 ITKNEKLAIKQLRENND--------IIIRP----ADKGGKTVVMDKADYTQKMTSILNSN 430
              N    +  L +  +        + I+P    A      V+ +  DY + +       
Sbjct: 687 AWYNRGNGLYSLGKYKEALASYDKALTIKPDYYEAWYNRGVVMANLGDYKEAVVC----- 741

Query: 431 DYEIIPGDPTKTIEESEKYGNLENESGQKHAASDFTKAFADLDEAEKVDPNVADSYYQRG 490
            Y+ +        +     GN  N+ G       + +A   L++A  + P+  +++Y + 
Sbjct: 742 -YDKVLAIHPHNYQAWYSRGNALNKLG------SYQEALISLNKAIALSPDSFEAHYNKA 794

Query: 491 QIYCLFGQYEEALRNLDKTIALNP 514
             Y L    E AL +L + I+LNP
Sbjct: 795 CCYALQQNLELALESLQRAISLNP 818



 Score = 55.1 bits (131), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 72/379 (18%), Positives = 146/379 (38%), Gaps = 40/379 (10%)

Query: 145 VHLHAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNF 204
           + L+  +++ +A    D+A  +  +    +Y R     L G YEEA+ + D+ +A+ P+ 
Sbjct: 421 IALYLLANYEEAVTSYDKALALKSDSYQGWYNRSLALHLSGCYEEAVDSYDQALAIKPDL 480

Query: 205 HVARAQRHFVVHKMIVPGDRERVEQSLKEFRNFVDTHSNVVEACTLFAQVLVDQEDFDGA 264
             A   R   ++   +  D+E V    K      D H      C    Q L +   ++ A
Sbjct: 481 DQAWYNRGIALY--FLGRDQEAVISYDKALAIKPDYHQAYYSRC----QALENLGRYEEA 534

Query: 265 EEYFNRSIRVDPENASLYVHRAMLMLQARGNVDEAIKLIEKAISIDKSCMFAYETLGTIE 324
              + + + + P++   + H+    L A  + DEA+   ++A+++      A+     + 
Sbjct: 535 VASYEQVLALKPDHYQAWYHKGN-ALYALKHYDEAVTSYDQALALKPDYYQAWYNGSVVL 593

Query: 325 VQRGRLEEAVKCFNKALPLARDEAELSHIYSLRDAAIAQMKVCERYNIKKKVSPRSQNIT 384
              G  EE V+   K +    +  +    Y++ +A        E      KV        
Sbjct: 594 YLLGLYEEVVRSCEKVVEFKPEHYQ--AWYNMGNALYFLGHYEEAVAAYDKV-------- 643

Query: 385 KNEKLAIKQLRENNDIIIRPADKGGKTVVMDKADYTQKMTSILNSNDYEIIPGDPTKTIE 444
                          ++I+P          D+A Y + +         E++         
Sbjct: 644 ---------------LLIKPD--------YDQAWYNRSIALYPLGFYQEVVASCDKAVAI 680

Query: 445 ESEKYGNLENESGQKHAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALR 504
             + Y    N     ++   + +A A  D+A  + P+  +++Y RG +    G Y+EA+ 
Sbjct: 681 APDHYKAWYNRGNGLYSLGKYKEALASYDKALTIKPDYYEAWYNRGVVMANLGDYKEAVV 740

Query: 505 NLDKTIALNPNFHVARAQR 523
             DK +A++P+ + A   R
Sbjct: 741 CYDKVLAIHPHNYQAWYSR 759



 Score = 47.4 bits (111), Expect = 0.021,   Method: Compositional matrix adjust.
 Identities = 35/169 (20%), Positives = 81/169 (47%), Gaps = 7/169 (4%)

Query: 145 VHLHAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNF 204
           + L+    + +  A  D+A  + P+   ++Y RG      G+Y+EAL + DK + + P++
Sbjct: 659 IALYPLGFYQEVVASCDKAVAIAPDHYKAWYNRGNGLYSLGKYKEALASYDKALTIKPDY 718

Query: 205 HVARAQRHFVVHKMIVPGDRERVEQSLKEFRNFVDTHSNVVEACTLFAQVLVDQEDFDGA 264
           + A   R  V+  +   GD    ++++  +   +  H +  +A       L     +  A
Sbjct: 719 YEAWYNRGVVMANL---GD---YKEAVVCYDKVLAIHPHNYQAWYSRGNALNKLGSYQEA 772

Query: 265 EEYFNRSIRVDPENASLYVHRAMLMLQARGNVDEAIKLIEKAISIDKSC 313
               N++I + P++   + ++A      + N++ A++ +++AIS++  C
Sbjct: 773 LISLNKAIALSPDSFEAHYNKACCY-ALQQNLELALESLQRAISLNPEC 820


>gi|194335763|ref|YP_002017557.1| hypothetical protein Ppha_0641 [Pelodictyon phaeoclathratiforme
           BU-1]
 gi|194308240|gb|ACF42940.1| TPR repeat-containing protein [Pelodictyon phaeoclathratiforme
           BU-1]
          Length = 1094

 Score = 63.2 bits (152), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 64/249 (25%), Positives = 115/249 (46%), Gaps = 14/249 (5%)

Query: 153 FTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQRH 212
           F +A    + A  V P+ A++   RG +    G+++EA+ + D   AL  +   AR    
Sbjct: 108 FDEALCSYEHALAVKPDYAEASLNRGVMLQELGRFDEAVLSYDH--ALTNDADNAR---- 161

Query: 213 FVVHKMIVPGDRERVEQSLKEFRNFVDTHSNVVEACTLFAQVLVDQEDFDGAEEYFNRSI 272
              H+  V  D +R  +++  F   +  + +   A      VL D + ++ A   ++R+I
Sbjct: 162 IWFHRGNVLQDLKRYGEAVFSFEKALAINPDYAIAYANLGNVLQDLKRYEEAVLSYDRAI 221

Query: 273 RVDPENASLYVHRAMLMLQARGNVDEAIKLIEKAISIDKSCMFAYETLGTIEVQRGRLEE 332
            V+P++   YV+R  + LQ     +EA+   EKA +I+     AY  LG +     R  E
Sbjct: 222 AVNPDSVRAYVNRG-IALQELKRYEEAVFSFEKACAINPDYAIAYANLGNVLQYLKRYGE 280

Query: 333 AVKCFNKALPLARDEAELSHIYSLRDAAIAQMKVCER----YNIKKKVSPRSQNITKNEK 388
           AV  ++KA+ L  D AE    +S R  A+  +++ E     Y+    V P       N  
Sbjct: 281 AVLSYDKAIALKPDYAE---AHSDRGVALQGLQLYEEALLSYDRALLVRPDYAEACYNRG 337

Query: 389 LAIKQLREN 397
           + +++L+ +
Sbjct: 338 VVLQKLKRH 346



 Score = 58.5 bits (140), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 88/382 (23%), Positives = 156/382 (40%), Gaps = 44/382 (11%)

Query: 137 NAHIKRAVVHLHAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDK 196
            A + R+   LH      +A A   E  + DP   ++      I     ++E++L   D 
Sbjct: 24  TAFVLRSAFLLHQQGRLEEAEALYREIVQSDPEHFEALRLLAIIAVQKKRFEDSLVLFDH 83

Query: 197 TIALNPNFHVARAQRHFVVHKMIVPGDRERVEQSLKEFRNFVDTHSNVVEACTLFAQVLV 256
            + +NP  H A      VV++ +      R +++L  + + +    +  EA      +L 
Sbjct: 84  ALKINPR-HAATLNNQGVVYEEL-----HRFDEALCSYEHALAVKPDYAEASLNRGVMLQ 137

Query: 257 DQEDFDGAEEYFNRSIRVDPENASLYVHRAMLMLQARGNVDEAIKLIEKAISIDKSCMFA 316
           +   FD A   ++ ++  D +NA ++ HR  + LQ      EA+   EKA++I+     A
Sbjct: 138 ELGRFDEAVLSYDHALTNDADNARIWFHRGNV-LQDLKRYGEAVFSFEKALAINPDYAIA 196

Query: 317 YETLGTIEVQRGRLEEAVKCFNKALPLARDEAELSHIYSLRDAAIAQMKVCERYNIKKKV 376
           Y  LG +     R EEAV  +++A+ +  D       Y  R  A+ ++K   RY      
Sbjct: 197 YANLGNVLQDLKRYEEAVLSYDRAIAVNPDSVR---AYVNRGIALQELK---RYE----- 245

Query: 377 SPRSQNITKNEK-LAIKQLRENNDIIIRPADKGGKTVVMDKADYTQKMTSILNSNDYEII 435
               + +   EK  AI     N D  I  A+ G      +   Y ++    + S D    
Sbjct: 246 ----EAVFSFEKACAI-----NPDYAIAYANLG------NVLQYLKRYGEAVLSYD---- 286

Query: 436 PGDPTKTIEESEKYGNLENESGQK-HAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYC 494
                K I     Y    ++ G        + +A    D A  V P+ A++ Y RG +  
Sbjct: 287 -----KAIALKPDYAEAHSDRGVALQGLQLYEEALLSYDRALLVRPDYAEACYNRGVVLQ 341

Query: 495 LFGQYEEALRNLDKTIALNPNF 516
              ++ EAL + ++ +AL P++
Sbjct: 342 KLKRHVEALASYEQALALKPDY 363



 Score = 51.6 bits (122), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 73/319 (22%), Positives = 139/319 (43%), Gaps = 36/319 (11%)

Query: 206 VARAQRHFVVHKMIVPGDRERVEQSLKEFRNFVDTHSNVVEACTLFAQVLVDQEDFDGAE 265
           V++    FV+    +   + R+E++   +R  V +     EA  L A + V ++ F+ + 
Sbjct: 19  VSKEDTAFVLRSAFLLHQQGRLEEAEALYREIVQSDPEHFEALRLLAIIAVQKKRFEDSL 78

Query: 266 EYFNRSIRVDPENASLYVHRAMLMLQARGNVDEAIKLIEKAISIDKSCMFAYETLGTIEV 325
             F+ +++++P +A+   ++ ++  +     DEA+   E A+++      A    G +  
Sbjct: 79  VLFDHALKINPRHAATLNNQGVVYEELH-RFDEALCSYEHALAVKPDYAEASLNRGVMLQ 137

Query: 326 QRGRLEEAVKCFNKALPLARDEAELSHIYSLRDAAIAQMKVCERYNIKKKVSPRSQNITK 385
           + GR +EAV  ++ AL    ++A+ + I+  R   +  +K   RY          + +  
Sbjct: 138 ELGRFDEAVLSYDHALT---NDADNARIWFHRGNVLQDLK---RYG---------EAVFS 182

Query: 386 NEK-LAIKQLRENNDIIIRPADKGGKTVVMDKADYTQKMTSILNSNDYEIIPGDPTKTIE 444
            EK LAI     N D  I  A+ G   V+ D   Y + + S   +     I  +P     
Sbjct: 183 FEKALAI-----NPDYAIAYANLG--NVLQDLKRYEEAVLSYDRA-----IAVNPDSVRA 230

Query: 445 ESEKYGNLENESGQKHAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALR 504
              +   L+     + A   F KA A       ++P+ A +Y   G +     +Y EA+ 
Sbjct: 231 YVNRGIALQELKRYEEAVFSFEKACA-------INPDYAIAYANLGNVLQYLKRYGEAVL 283

Query: 505 NLDKTIALNPNFHVARAQR 523
           + DK IAL P++  A + R
Sbjct: 284 SYDKAIALKPDYAEAHSDR 302



 Score = 50.1 bits (118), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 52/239 (21%), Positives = 110/239 (46%), Gaps = 12/239 (5%)

Query: 153 FTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQRH 212
           + +A    ++A  ++P+ A +Y   G +     +YEEA+ + D+ IA+NP+   A   R 
Sbjct: 176 YGEAVFSFEKALAINPDYAIAYANLGNVLQDLKRYEEAVLSYDRAIAVNPDSVRAYVNRG 235

Query: 213 FVVHKMIVPGDRERVEQSLKEFRNFVDTHSNVVEACTLFAQVLVDQEDFDGAEEYFNRSI 272
             + ++      +R E+++  F      + +   A      VL   + +  A   ++++I
Sbjct: 236 IALQEL------KRYEEAVFSFEKACAINPDYAIAYANLGNVLQYLKRYGEAVLSYDKAI 289

Query: 273 RVDPENASLYVHRAMLMLQARGNVDEAIKLIEKAISIDKSCMFAYETLGTIEVQRGRLEE 332
            + P+ A  +  R +  LQ     +EA+   ++A+ +      A    G +  +  R  E
Sbjct: 290 ALKPDYAEAHSDRGV-ALQGLQLYEEALLSYDRALLVRPDYAEACYNRGVVLQKLKRHVE 348

Query: 333 AVKCFNKALPLARDEAELSHIYSLRDAAIAQMKVCERYNIKKKVSPRSQNITKNEKLAI 391
           A+  + +AL L  D   LS +         +M++C+  + + ++S   Q I ++EK+A+
Sbjct: 349 ALASYEQALALKPDYDFLSGM-----CLNIKMQMCDWRDFECQLSRLFQKIERSEKVAV 402


>gi|406934936|gb|EKD69050.1| TPR Domain containing protein [uncultured bacterium]
          Length = 488

 Score = 63.2 bits (152), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 62/248 (25%), Positives = 111/248 (44%), Gaps = 16/248 (6%)

Query: 95  HTKALARLLRATVYIFTSQSTKAIEDLTQLVEDTSVDPKIKVNAHIKRAVVHLHAASDFT 154
           + KAL  L    +Y  T +   +I    +L+   S D     + H    V +L+  +  T
Sbjct: 232 NKKALNNL--GLIYGLTGKFYDSISTWKKLLNVDSGD----YSTHFNLGVAYLNVGNK-T 284

Query: 155 KAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQRHFV 214
            A    + A K++P  A++    G +Y    +Y+EA+    K I ++P+F+ A      +
Sbjct: 285 NARYYFESALKINPRSAEALMNSGSLYVQEARYDEAVGEFKKVIKVDPSFYKAYYNLGTI 344

Query: 215 VHKMIVPGDRERVEQSLKEFRNFVDTHSNVVEACTLFAQVLVDQEDFDGAEEYFNRSIRV 274
            +      D E V       +  V    + V A     ++  + +D +   E F + + +
Sbjct: 345 YYMRRQFLDCEAV------MKKAVSYCPDFVNAYYYLGKLYFELDDGEKGLEMFKKIVEI 398

Query: 275 DPENA-SLYVHRAMLMLQARGNVDEAIKLIEKAISIDKSCMFAYETLGTIEVQRGRLEEA 333
            PEN  +L  +  ML LQ R   +EA+KL +KA+ IDK+ + AY  LG    +   ++ +
Sbjct: 399 SPENPIALTDYAIMLSLQKRH--EEAVKLFKKAVRIDKNYLKAYFNLGLSYFELKDMKNS 456

Query: 334 VKCFNKAL 341
            + F K +
Sbjct: 457 ERFFRKCI 464



 Score = 48.1 bits (113), Expect = 0.011,   Method: Compositional matrix adjust.
 Identities = 68/353 (19%), Positives = 143/353 (40%), Gaps = 28/353 (7%)

Query: 178 GQIYCLFGQYEEALRNLDKTIALNPNFHVARAQRHFVVHKMIVPGDRERVEQSLKEFRNF 237
           G +Y  +G +E A+    K+I ++     A A       K+        V+ SLK +   
Sbjct: 2   GMLYIEYGFFESAVDCFKKSIEIDAYSVDAYAGLGVAYLKL------NNVDYSLKMYLTA 55

Query: 238 VDTHSNVVEACTLFAQVLVDQEDFDGAEEYFNRSIRVDPENASLYVHRAMLMLQARGNVD 297
           +  +  +V      + +    +    A +Y  ++  ++P+N ++  +  +L  +   N +
Sbjct: 56  LTINPKLVSVLISVSNIYASLDKTALAIDYLCKAKVIEPKNTNILNNLGVLHAKTN-NFE 114

Query: 298 EAIKLIEKAISIDKSCMFAYETLGTIEVQRGRLEEAVKCFNKALPLARDEAEL-SHIYSL 356
           +AIK   + I I    + AY  LG    ++G ++ A+  +++ +   +  A+L +++  L
Sbjct: 115 DAIKCWNEVIKIKPFELDAYYNLGIAYSEKGFVDAAIFMYSRVVKTGKGSAQLYNNLGVL 174

Query: 357 RDAAIAQMKVCERYNIKKKVSPRSQNITKNEKLAIKQLRENNDII--------IRPADKG 408
            +      K  E Y    K+  +   +  N  L   +L   N  I        I P +K 
Sbjct: 175 YEKKNELKKALECYLNSYKMDGKCTEVINNIGLVYAKLNNYNKAIDSYLKTLDIEPENKK 234

Query: 409 GKTVVMDKADYTQKMTSILNSND--YEIIPGDPTKTIEESEKYGNLENESGQKHAASDFT 466
               +      T K    +++      +  GD +        Y N+ N++  ++      
Sbjct: 235 ALNNLGLIYGLTGKFYDSISTWKKLLNVDSGDYSTHFNLGVAYLNVGNKTNARYY----- 289

Query: 467 KAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVA 519
                 + A K++P  A++    G +Y    +Y+EA+    K I ++P+F+ A
Sbjct: 290 -----FESALKINPRSAEALMNSGSLYVQEARYDEAVGEFKKVIKVDPSFYKA 337



 Score = 39.7 bits (91), Expect = 4.7,   Method: Compositional matrix adjust.
 Identities = 34/169 (20%), Positives = 69/169 (40%), Gaps = 7/169 (4%)

Query: 178 GQIYCLFGQYEEALRNLDKTIALNPNFHVARAQRHFVVHKMIVPGDRERVEQSLKEFRNF 237
           G +Y     Y +A+ +  KT+ + P        +  + +  ++ G   +   S+  ++  
Sbjct: 206 GLVYAKLNNYNKAIDSYLKTLDIEPE------NKKALNNLGLIYGLTGKFYDSISTWKKL 259

Query: 238 VDTHSNVVEACTLFAQVLVDQEDFDGAEEYFNRSIRVDPENASLYVHRAMLMLQARGNVD 297
           ++  S             ++  +   A  YF  +++++P +A   ++   L +Q     D
Sbjct: 260 LNVDSGDYSTHFNLGVAYLNVGNKTNARYYFESALKINPRSAEALMNSGSLYVQ-EARYD 318

Query: 298 EAIKLIEKAISIDKSCMFAYETLGTIEVQRGRLEEAVKCFNKALPLARD 346
           EA+   +K I +D S   AY  LGTI   R +  +      KA+    D
Sbjct: 319 EAVGEFKKVIKVDPSFYKAYYNLGTIYYMRRQFLDCEAVMKKAVSYCPD 367


>gi|113478146|ref|YP_724207.1| TPR repeat-containing serine/threonine protein kinase
           [Trichodesmium erythraeum IMS101]
 gi|110169194|gb|ABG53734.1| serine/threonine protein kinase with TPR repeats [Trichodesmium
           erythraeum IMS101]
          Length = 746

 Score = 63.2 bits (152), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 75/309 (24%), Positives = 133/309 (43%), Gaps = 40/309 (12%)

Query: 72  FEHEDYLTAIRHCTEEIESTSSNHTKALARLLRATVYIFTSQSTKAIEDLTQLV--EDTS 129
           FE ++Y  AI   T+ I      H +A  +  R  VY  +    KAI+D TQ++     +
Sbjct: 425 FEQQNYPKAINDFTQ-ILRLQPEHAEAYYK--RGLVYYKSQDYLKAIQDYTQVIGLRPNT 481

Query: 130 VDPKIKVNAHIKRAVVHLHAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEE 189
           +D     NA++ R V +  A ++  KA AD  +  K+ P   D YY+RG+     G Y+ 
Sbjct: 482 LD---AYNAYLGRGVAY-AANNNLQKAIADYTQMIKIKPQKIDGYYRRGRARFFMGDYQG 537

Query: 190 ALRNLDKTIALNPNFHVARAQRHFVVHKM---------------------IVPGDRERVE 228
           +L + ++ I +NP    A A+R      +                     +   +R    
Sbjct: 538 SLDDYNQVIKINPKNEDAYARRCSTYLNLAEYEKAASDCTEAIKIRPKNEVAYNNRCIAY 597

Query: 229 QSLKEFRNFVDTHSNVVE-----ACTLFAQVLVDQED--FDGAEEYFNRSIRVDPENASL 281
            +L+E++  +   +  +E     A     + L   ED     A E + ++I ++P     
Sbjct: 598 LNLQEYQKAISDCTKRIELEPQNAEGYINRGLAYTEDMQLQKAIEDYTQAIGLNPNKPEA 657

Query: 282 YVHRAMLMLQARGNVDEAIKLIEKAISIDKSCMFAYETLGTIEVQRGRLEEAVKCFNKA- 340
           Y +RA +  + + N  +AI    +AI ++     AY + G + V  G ++ A+   + A 
Sbjct: 658 YANRANVYNEQK-NYQQAIADYVQAIRLNPEYARAYYSRGLVRVNMGDIKGAISDLDTAA 716

Query: 341 -LPLARDEA 348
            L LA+  A
Sbjct: 717 QLYLAQGRA 725



 Score = 42.4 bits (98), Expect = 0.68,   Method: Compositional matrix adjust.
 Identities = 21/63 (33%), Positives = 34/63 (53%)

Query: 461 AASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVAR 520
           A ++  KA AD  +  K+ P   D YY+RG+     G Y+ +L + ++ I +NP    A 
Sbjct: 497 ANNNLQKAIADYTQMIKIKPQKIDGYYRRGRARFFMGDYQGSLDDYNQVIKINPKNEDAY 556

Query: 521 AQR 523
           A+R
Sbjct: 557 ARR 559



 Score = 42.0 bits (97), Expect = 0.84,   Method: Compositional matrix adjust.
 Identities = 74/359 (20%), Positives = 137/359 (38%), Gaps = 49/359 (13%)

Query: 174 YYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQRHFVVHKMIVPGDRERVEQSLKE 233
           +Y RG  Y     Y+ A+ +  K I LNP    +    +F  ++ +V  +++   +++ +
Sbjct: 383 FYGRGNAYYELKNYQNAISDYTKAILLNP----SNVNAYF--NRGVVYFEQQNYPKAIND 436

Query: 234 FRNFVDTHSNVVEACTLFAQVLVDQEDFDGAEEYFNRSIRVDPENA---SLYVHRAMLML 290
           F   +       EA      V    +D+  A + + + I + P      + Y+ R  +  
Sbjct: 437 FTQILRLQPEHAEAYYKRGLVYYKSQDYLKAIQDYTQVIGLRPNTLDAYNAYLGRG-VAY 495

Query: 291 QARGNVDEAIKLIEKAISIDKSCMFAYETLGTIEVQRGRLEEAVKCFNKALPLARDEAEL 350
            A  N+ +AI    + I I    +  Y   G      G  + ++  +N+ + +     + 
Sbjct: 496 AANNNLQKAIADYTQMIKIKPQKIDGYYRRGRARFFMGDYQGSLDDYNQVIKINPKNED- 554

Query: 351 SHIYSLRDAAIAQMKVCERYNIKKKVSPRSQNITKNEKLAIKQLRENNDIIIRPADKGGK 410
                      A  + C  Y           N+ + EK A         I IRP ++   
Sbjct: 555 -----------AYARRCSTY----------LNLAEYEKAASDC---TEAIKIRPKNE--- 587

Query: 411 TVVMDKADYTQKMTSILNSNDYEIIPGDPTKTIEESEKYGNLENESGQKHAASD---FTK 467
                   Y  +  + LN  +Y+    D TK IE   +  N E    +  A ++     K
Sbjct: 588 ------VAYNNRCIAYLNLQEYQKAISDCTKRIELEPQ--NAEGYINRGLAYTEDMQLQK 639

Query: 468 AFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQRHFV 526
           A  D  +A  ++PN  ++Y  R  +Y     Y++A+ +  + I LNP +  A   R  V
Sbjct: 640 AIEDYTQAIGLNPNKPEAYANRANVYNEQKNYQQAIADYVQAIRLNPEYARAYYSRGLV 698



 Score = 39.7 bits (91), Expect = 3.9,   Method: Compositional matrix adjust.
 Identities = 56/274 (20%), Positives = 117/274 (42%), Gaps = 25/274 (9%)

Query: 268 FNRSIRVDPENASLYVHRAMLMLQARGNVDEAIKLIEKAISIDKSCMFAYETLGTIEVQR 327
           + ++I ++P N + Y +R ++  + + N  +AI    + + +      AY   G +  + 
Sbjct: 403 YTKAILLNPSNVNAYFNRGVVYFEQQ-NYPKAINDFTQILRLQPEHAEAYYKRGLVYYKS 461

Query: 328 GRLEEAVKCFNKALPLARDEAELSHIYSLRDAAIAQMKVCERYNIKKKVSPRSQNI-TKN 386
               +A++ + + + L  +  +  + Y  R  A A        N++K ++  +Q I  K 
Sbjct: 462 QDYLKAIQDYTQVIGLRPNTLDAYNAYLGRGVAYAANN-----NLQKAIADYTQMIKIKP 516

Query: 387 EKLAIKQLRENNDIIIR----PADKGGKTVVMDKAD---YTQKMTSILNSNDYEIIPGDP 439
           +K+     R      +       D   + + ++  +   Y ++ ++ LN  +YE    D 
Sbjct: 517 QKIDGYYRRGRARFFMGDYQGSLDDYNQVIKINPKNEDAYARRCSTYLNLAEYEKAASDC 576

Query: 440 TKTIEESEKYGNLENESGQKHAA------SDFTKAFADLDEAEKVDPNVADSYYQRGQIY 493
           T+ I+   K     NE    +         ++ KA +D  +  +++P  A+ Y  RG  Y
Sbjct: 577 TEAIKIRPK-----NEVAYNNRCIAYLNLQEYQKAISDCTKRIELEPQNAEGYINRGLAY 631

Query: 494 CLFGQYEEALRNLDKTIALNPNFHVARAQRHFVW 527
               Q ++A+ +  + I LNPN   A A R  V+
Sbjct: 632 TEDMQLQKAIEDYTQAIGLNPNKPEAYANRANVY 665


>gi|425463465|ref|ZP_18842804.1| hypothetical protein MICAH_230001 [Microcystis aeruginosa PCC 9809]
 gi|389832747|emb|CCI23369.1| hypothetical protein MICAH_230001 [Microcystis aeruginosa PCC 9809]
          Length = 308

 Score = 63.2 bits (152), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 42/134 (31%), Positives = 72/134 (53%), Gaps = 13/134 (9%)

Query: 86  EEIESTSSNHTKAL--------ARLLRATVYIFTSQSTKAIEDLTQLVEDTSVDPKIKVN 137
           +E +   +++T+AL        A   R  V+    +S +AI D TQ +   S+DP + V+
Sbjct: 50  KESQKAIADYTQALSLDPNLVDAYFNRGIVHNRLGESQQAIADYTQAL---SLDPNL-VD 105

Query: 138 AHIKRAVVHLHAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKT 197
           A+  R +VH +   +  +A AD  EA +++P +AD+Y +RG  Y    +Y++AL + ++ 
Sbjct: 106 AYFNRGIVH-NRLGESQQAIADYTEAIRLNPKLADAYNKRGDTYYWLKKYQKALTDYEQA 164

Query: 198 IALNPNFHVARAQR 211
           I LNPN       R
Sbjct: 165 IRLNPNLKQVIGSR 178



 Score = 51.2 bits (121), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 36/173 (20%), Positives = 83/173 (47%), Gaps = 11/173 (6%)

Query: 104 RATVYIFTSQSTKAIEDLTQLVEDTSVDPKIKVNAHIKRAVVHLHAASDFTKAFADLDEA 163
           R   Y    +  KA+ D TQ++    ++P    +A+  R + + +   +  KA AD  +A
Sbjct: 8   RGLAYGQLGKYQKALADYTQVIR---LNPNY-ADAYFNRGLAY-NRLKESQKAIADYTQA 62

Query: 164 EKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQRHFVVHKMIVPGD 223
             +DPN+ D+Y+ RG ++   G+ ++A+ +  + ++L+PN   A   R  V +++     
Sbjct: 63  LSLDPNLVDAYFNRGIVHNRLGESQQAIADYTQALSLDPNLVDAYFNRGIVHNRL----- 117

Query: 224 RERVEQSLKEFRNFVDTHSNVVEACTLFAQVLVDQEDFDGAEEYFNRSIRVDP 276
               +Q++ ++   +  +  + +A           + +  A   + ++IR++P
Sbjct: 118 -GESQQAIADYTEAIRLNPKLADAYNKRGDTYYWLKKYQKALTDYEQAIRLNP 169



 Score = 50.1 bits (118), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 44/200 (22%), Positives = 87/200 (43%), Gaps = 44/200 (22%)

Query: 170 VADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQRHFVVHKMIVPGDRERVEQ 229
           +AD+Y+ RG  Y   G+Y++AL +  + I LNPN+  A   R    +++      +  ++
Sbjct: 1   MADAYFNRGLAYGQLGKYQKALADYTQVIRLNPNYADAYFNRGLAYNRL------KESQK 54

Query: 230 SLKEFRNFVDTHSNVVEACTLFAQVLVDQEDFDGAEEYFNRSIRVDPENASLYVHRAMLM 289
           ++ ++   +    N+V+A                   YFNR I          VH  +  
Sbjct: 55  AIADYTQALSLDPNLVDA-------------------YFNRGI----------VHNRL-- 83

Query: 290 LQARGNVDEAIKLIEKAISIDKSCMFAYETLGTIEVQRGRLEEAVKCFNKALPLARDEAE 349
               G   +AI    +A+S+D + + AY   G +  + G  ++A+  + +A+   R   +
Sbjct: 84  ----GESQQAIADYTQALSLDPNLVDAYFNRGIVHNRLGESQQAIADYTEAI---RLNPK 136

Query: 350 LSHIYSLRDAAIAQMKVCER 369
           L+  Y+ R      +K  ++
Sbjct: 137 LADAYNKRGDTYYWLKKYQK 156



 Score = 45.8 bits (107), Expect = 0.057,   Method: Compositional matrix adjust.
 Identities = 21/57 (36%), Positives = 34/57 (59%)

Query: 467 KAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQR 523
           +A AD  EA +++P +AD+Y +RG  Y    +Y++AL + ++ I LNPN       R
Sbjct: 122 QAIADYTEAIRLNPKLADAYNKRGDTYYWLKKYQKALTDYEQAIRLNPNLKQVIGSR 178



 Score = 44.3 bits (103), Expect = 0.17,   Method: Compositional matrix adjust.
 Identities = 20/60 (33%), Positives = 36/60 (60%)

Query: 467 KAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQRHFV 526
           KA AD  +A  +DPN+ D+Y+ RG ++   G+ ++A+ +  + ++L+PN   A   R  V
Sbjct: 54  KAIADYTQALSLDPNLVDAYFNRGIVHNRLGESQQAIADYTQALSLDPNLVDAYFNRGIV 113



 Score = 42.4 bits (98), Expect = 0.70,   Method: Compositional matrix adjust.
 Identities = 20/63 (31%), Positives = 36/63 (57%), Gaps = 2/63 (3%)

Query: 467 KAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQRH-- 524
           +A AD  +A  +DPN+ D+Y+ RG ++   G+ ++A+ +  + I LNP    A  +R   
Sbjct: 88  QAIADYTQALSLDPNLVDAYFNRGIVHNRLGESQQAIADYTEAIRLNPKLADAYNKRGDT 147

Query: 525 FVW 527
           + W
Sbjct: 148 YYW 150



 Score = 38.5 bits (88), Expect = 9.9,   Method: Compositional matrix adjust.
 Identities = 17/46 (36%), Positives = 27/46 (58%)

Query: 482 VADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQRHFVW 527
           +AD+Y+ RG  Y   G+Y++AL +  + I LNPN+  A   R   +
Sbjct: 1   MADAYFNRGLAYGQLGKYQKALADYTQVIRLNPNYADAYFNRGLAY 46


>gi|218439610|ref|YP_002377939.1| hypothetical protein PCC7424_2659 [Cyanothece sp. PCC 7424]
 gi|218172338|gb|ACK71071.1| Tetratricopeptide TPR_2 repeat protein [Cyanothece sp. PCC 7424]
          Length = 565

 Score = 63.2 bits (152), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 70/280 (25%), Positives = 119/280 (42%), Gaps = 18/280 (6%)

Query: 149 AASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVAR 208
           A +   KA      A K+  N A  Y + G+      Q+ EAL+  ++   +NP+  V  
Sbjct: 50  AQNQLEKAINSYSTATKLQANFATVYLRLGKALQKNQQFTEALKAYNQAFLINPDLTVQS 109

Query: 209 AQRHFVVHKMIVPGDRERVEQSLKEFRNFVDTHSNVVEACTLFAQVLVDQEDFDGAEEYF 268
                +     V   +  V +++  ++  V      +EA     + L  Q+ +  A + F
Sbjct: 110 DLASDLTRLGAVLLKKGNVSEAIIAYQIAVAIDPLAIEANHNLGKALAQQQRWQEAGQAF 169

Query: 269 NRSIRVDPENASLYVHRAMLMLQARGNVDEAIKLIEKAISIDKSCMFAYETLGTIEVQRG 328
           N+ I  DP+NA  Y +    + + +    EA K+ EKA+ +       ++ L  I V+ G
Sbjct: 170 NQVILFDPDNAQAYTNLGNALFK-QEKWHEAKKIYEKALELTPKDALIHQRLAEILVEIG 228

Query: 329 RLEEAVKCFNKALPLARDEAELSHIYSLRDAAIAQMKVCERYNIKK---KVSPRSQNITK 385
               A   + KAL LA ++ +L +   L      Q KV E  N  +   K+SP +  I K
Sbjct: 229 EFNSAETLYLKALALAPNQGDLYN--GLGQVLYEQKKVDEAINAYQKAIKLSPNNPEIYK 286

Query: 386 N----------EKLAIKQLRENNDIIIRPADKGGKTVVMD 415
           N           + A+K  R+   + + PA+ G K  VM+
Sbjct: 287 NFCFARHTQHQYEEALKLCRQ--AMTLNPAEGGAKFYVME 324



 Score = 48.9 bits (115), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 69/324 (21%), Positives = 134/324 (41%), Gaps = 57/324 (17%)

Query: 219 IVPGDR----ERVEQSLKEFRNFVDTHSNVVEACTLFAQVLVDQEDFDGAEEYFNRSIRV 274
           ++ GDR     ++E+++  +       +N         + L   + F  A + +N++  +
Sbjct: 42  LMQGDRFLAQNQLEKAINSYSTATKLQANFATVYLRLGKALQKNQQFTEALKAYNQAFLI 101

Query: 275 DPE-----NASLYVHRAMLMLQARGNVDEAIKLIEKAISIDKSCMFAYETLGTIEVQRGR 329
           +P+     + +  + R   +L  +GNV EAI   + A++ID   + A   LG    Q+ R
Sbjct: 102 NPDLTVQSDLASDLTRLGAVLLKKGNVSEAIIAYQIAVAIDPLAIEANHNLGKALAQQQR 161

Query: 330 LEEAVKCFNKALPLARDEAELSHIYSLRDAAIAQMKVCERYNIKKKVSPRSQNITKNEKL 389
            +EA + FN+ +    D A+     +L +A   Q    E+++  KK+  ++  +T  + L
Sbjct: 162 WQEAGQAFNQVILFDPDNAQ--AYTNLGNALFKQ----EKWHEAKKIYEKALELTPKDAL 215

Query: 390 AIKQLRENNDIIIRPADKGGKTVVMDKADYTQKMTSILNSNDYEIIPGDPTKTIEESEKY 449
             ++L E               ++++  ++    T  L             K +  +   
Sbjct: 216 IHQRLAE---------------ILVEIGEFNSAETLYL-------------KALALAPNQ 247

Query: 450 GNLENESGQK-HAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLF----GQYEEALR 504
           G+L N  GQ  +      +A     +A K+ PN  + Y      +C       QYEEAL+
Sbjct: 248 GDLYNGLGQVLYEQKKVDEAINAYQKAIKLSPNNPEIYKN----FCFARHTQHQYEEALK 303

Query: 505 NLDKTIALNP-----NFHVARAQR 523
              + + LNP      F+V   +R
Sbjct: 304 LCRQAMTLNPAEGGAKFYVMEVER 327



 Score = 38.5 bits (88), Expect = 9.3,   Method: Compositional matrix adjust.
 Identities = 47/252 (18%), Positives = 109/252 (43%), Gaps = 15/252 (5%)

Query: 105 ATVYIFTSQSTKAIEDLTQLVEDTS----VDPKIKVNAHIKRAVVHLHAA----SDFTKA 156
           ATVY+   ++ +  +  T+ ++  +    ++P + V + +   +  L A      + ++A
Sbjct: 72  ATVYLRLGKALQKNQQFTEALKAYNQAFLINPDLTVQSDLASDLTRLGAVLLKKGNVSEA 131

Query: 157 FADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQRHFVVH 216
                 A  +DP   ++ +  G+      +++EA +  ++ I  +P+   A       + 
Sbjct: 132 IIAYQIAVAIDPLAIEANHNLGKALAQQQRWQEAGQAFNQVILFDPDNAQAYTNLGNALF 191

Query: 217 KMIVPGDRERVEQSLKEFRNFVDTHSNVVEACTLFAQVLVDQEDFDGAEEYFNRSIRVDP 276
           K      +E+  ++ K +   ++            A++LV+  +F+ AE  + +++ + P
Sbjct: 192 K------QEKWHEAKKIYEKALELTPKDALIHQRLAEILVEIGEFNSAETLYLKALALAP 245

Query: 277 ENASLYVHRAMLMLQARGNVDEAIKLIEKAISIDKSCMFAYETLGTIEVQRGRLEEAVKC 336
               LY     ++ + +  VDEAI   +KAI +  +    Y+        + + EEA+K 
Sbjct: 246 NQGDLYNGLGQVLYEQK-KVDEAINAYQKAIKLSPNNPEIYKNFCFARHTQHQYEEALKL 304

Query: 337 FNKALPLARDEA 348
             +A+ L   E 
Sbjct: 305 CRQAMTLNPAEG 316


>gi|300867449|ref|ZP_07112103.1| putative TPR repeat [Oscillatoria sp. PCC 6506]
 gi|300334564|emb|CBN57271.1| putative TPR repeat [Oscillatoria sp. PCC 6506]
          Length = 715

 Score = 63.2 bits (152), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 80/355 (22%), Positives = 153/355 (43%), Gaps = 42/355 (11%)

Query: 170 VADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQRHFVVHKMIVPGDRERVEQ 229
           +AD Y ++G+   L G+Y+EAL + +K I +N +   A   R  V+ K+      +R+E+
Sbjct: 319 IADDYVKQGEALYLEGRYQEALVSFEKAILMNADIDEAWYNRGNVLVKV------QRLEE 372

Query: 230 SLKEFRNFVDTHSNVVEACTLFAQVLVDQEDFDGAEEYFNRSIRVDPENASLYVHRAMLM 289
           ++  +   +  +    EA      VL+  + ++ A   ++++I + PE    + +RA  M
Sbjct: 373 AIACYDQAIGLNREYYEAWYNRGNVLMRLQRYEEAAAAYDQAIALKPEEYGPWHNRAAAM 432

Query: 290 LQARGNVDEAIKLIEKAISIDKSCMFAYETLGTIEVQRGRLEEAVKCFNKALPLARDEAE 349
            + +    EAI   EKA+SI       + +   +  +  R  EAV  +++AL +  D  E
Sbjct: 433 GRLQ-RYQEAIASYEKALSIKSDDPEVWHSRAAMLGKLQRYAEAVASYDQALTIRADRYE 491

Query: 350 LSHIYSLRDAAIAQMKVCERYNIKKKVSPRSQNITKNEKLAIKQLRENNDIIIRPADKGG 409
             +                R N+  ++   S  I   +K AI    +  ++        G
Sbjct: 492 TWY---------------NRGNMLWRLQRYSDAIASYDK-AIALNADKYEVWYNRGAVLG 535

Query: 410 KTVVMDKADYTQKMTSILNSNDYEIIPGDPTKTIEESEKYGNLENESGQKHAASDFTKAF 469
           K    ++A  +      L  ND+EI              +G L          S++ +A 
Sbjct: 536 KLQQYEEAIASYDRAIALQPNDHEIWHNRGV-------AFGRL----------SEYVEAI 578

Query: 470 ADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQRH 524
           A  ++A  + P   ++++ +G+ +    +YEEA+   D+ IA+ P  +   A RH
Sbjct: 579 ASYEQAIAIQPQCYEAWFGKGETFAKLQEYEEAIAAYDRAIAIKPESY--DAWRH 631



 Score = 58.9 bits (141), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 45/196 (22%), Positives = 90/196 (45%), Gaps = 7/196 (3%)

Query: 153 FTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQRH 212
           ++ A A  D+A  ++ +  + +Y RG +     QYEEA+ + D+ IAL PN H     R 
Sbjct: 506 YSDAIASYDKAIALNADKYEVWYNRGAVLGKLQQYEEAIASYDRAIALQPNDHEIWHNRG 565

Query: 213 FVVHKMIVPGDRERVEQSLKEFRNFVDTHSNVVEACTLFAQVLVDQEDFDGAEEYFNRSI 272
               ++      E VE ++  +   +       EA     +     ++++ A   ++R+I
Sbjct: 566 VAFGRL-----SEYVE-AIASYEQAIAIQPQCYEAWFGKGETFAKLQEYEEAIAAYDRAI 619

Query: 273 RVDPENASLYVHRAMLMLQARGNVDEAIKLIEKAISIDKSCMFAYETLGTIEVQRGRLEE 332
            + PE+   + HR     + +   +EA+   +KAI+I      A+   G +  +  +  E
Sbjct: 620 AIKPESYDAWRHRGTAFSELK-QYEEAMICYDKAIAIKPDNAQAWRDRGALLSELKQDSE 678

Query: 333 AVKCFNKALPLARDEA 348
           AV   ++A+ + ++ A
Sbjct: 679 AVASLSQAISIQQNSA 694



 Score = 40.4 bits (93), Expect = 2.2,   Method: Compositional matrix adjust.
 Identities = 32/163 (19%), Positives = 72/163 (44%), Gaps = 41/163 (25%)

Query: 151 SDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQ 210
           S++ +A A  ++A  + P   ++++ +G+ +    +YEEA+   D+ IA+ P  +   A 
Sbjct: 572 SEYVEAIASYEQAIAIQPQCYEAWFGKGETFAKLQEYEEAIAAYDRAIAIKPESY--DAW 629

Query: 211 RHFVVHKMIVPGDRERVEQSLKEFRNFVDTHSNVVEACTLFAQVLVDQEDFDGAEEYFNR 270
           RH                                    T F+++    + ++ A   +++
Sbjct: 630 RH----------------------------------RGTAFSEL----KQYEEAMICYDK 651

Query: 271 SIRVDPENASLYVHRAMLMLQARGNVDEAIKLIEKAISIDKSC 313
           +I + P+NA  +  R  L+ + + +  EA+  + +AISI ++ 
Sbjct: 652 AIAIKPDNAQAWRDRGALLSELKQD-SEAVASLSQAISIQQNS 693


>gi|119357637|ref|YP_912281.1| hypothetical protein Cpha266_1841 [Chlorobium phaeobacteroides DSM
           266]
 gi|119354986|gb|ABL65857.1| TPR repeat-containing protein [Chlorobium phaeobacteroides DSM 266]
          Length = 3035

 Score = 63.2 bits (152), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 53/233 (22%), Positives = 102/233 (43%), Gaps = 12/233 (5%)

Query: 156 AFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQRHFVV 215
           A    ++A  + P+ A +Y+ RG       +YE+AL + +K IALNP F  A   +   +
Sbjct: 150 ALESFEKAIALKPDYAPAYFNRGNAVMAMHRYEDALASYEKAIALNPCFADAYYNKGLAL 209

Query: 216 HKMIVPGDRERVEQSLKEFRNFVDTHSNVVEACTLFAQVLVDQEDFDGAEEYFNRSIRVD 275
            K++      R + +L+ ++  +    +  EA      V +  + ++ A   +   I ++
Sbjct: 210 QKLM------RYDDALERYKQAIALKPDYTEAFLHQGNVFMALQRYENALLSYEHVIALN 263

Query: 276 PENASLYVHRAMLMLQARGNVDEAIKLIEKAISIDKSCMFAYETLGTIEVQRGRLEEAVK 335
           P++   Y +R    LQ      +A+   ++ +++      AY   G   +   R E+A+ 
Sbjct: 264 PDDVEAYTNRGY-ALQELKRYGDALLSYDRVLALKCDDADAYNNRGNAFMALKRYEDALG 322

Query: 336 CFNKALPLARDEAELSHIYSLRDAAIAQMKVCERYNIKKKVSPRSQNITKNEK 388
            +N  L L  D   LS +         +MK+CE      +V    + I ++EK
Sbjct: 323 SYNHVLALKPDYDFLSGL-----CLYTRMKICEWNAFDDQVDQLEKKIERHEK 370



 Score = 60.8 bits (146), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 69/311 (22%), Positives = 134/311 (43%), Gaps = 48/311 (15%)

Query: 210  QRHFVVHKMIVPGDRERVEQSLKEFRNFVDTHSNVVEACTLFAQVLVDQEDFDGAEEYFN 269
            QR   +H+        R++++   +R  + +     +A  L A +   + D + A   F+
Sbjct: 815  QRALTLHQ------EGRLDEAEALYREILSSSPEHFDALQLSATIAAQRHDSEQALVLFD 868

Query: 270  RSIRVDPENASLYVHRAMLMLQARGNVDEAIKLIEKAISIDKSCMFAYETLGTIEVQRGR 329
            ++I ++P +     +R    L+A    +EA+   EKA+ +    + AY   G++ ++  R
Sbjct: 869  QAISINPGHPGSRNNRGN-ALRALQRYEEALDSYEKALQLKPDYVDAYTNRGSVLLELKR 927

Query: 330  LEEAVKCFNKALPLARDEAELSHIYSLRDAAIAQMKVCERYNIKKKVSPRSQNITKNEKL 389
             EEA+  + +A+ +  D  E    YS  D A+  + + +RY          + +   E+ 
Sbjct: 928  YEEALASYERAIAIKPDHTEF---YS--DLAVVLLAL-KRYE---------EALATYER- 971

Query: 390  AIKQLRENNDIIIRPADKGGKTVVMDKADYTQKMTSILNSNDYEIIPGDPTKTI----EE 445
             + +LR ++ ++                 Y  +   +L    YE   G   K I    + 
Sbjct: 972  -VLELRRDDPVV-----------------YNNRGNVLLELKRYEEALGSYEKAIALNPDY 1013

Query: 446  SEKYGNLENESGQKHAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRN 505
            +E Y NL      +       +A    ++A  + P+ AD+YY R  ++    +YEEAL +
Sbjct: 1014 AEAYSNL---GVTRKVLKRDEEALGSYEKAIALKPDFADAYYNRAVLFYDLDRYEEALAS 1070

Query: 506  LDKTIALNPNF 516
             D+ I L P+F
Sbjct: 1071 YDRAIVLKPDF 1081



 Score = 60.1 bits (144), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 59/238 (24%), Positives = 111/238 (46%), Gaps = 22/238 (9%)

Query: 162  EAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQRHFVVHKMIVP 221
            E  + DP V   Y  RG +     +YEEAL + +K IALNP++  A A  +  V + ++ 
Sbjct: 974  ELRRDDPVV---YNNRGNVLLELKRYEEALGSYEKAIALNPDY--AEAYSNLGVTRKVL- 1027

Query: 222  GDRERVEQSLKEFRNFVDTHSNVVEACTLFAQVLVDQEDFDGAEEYFNRSIRVDPENASL 281
               +R E++L  +   +    +  +A    A +  D + ++ A   ++R+I + P+   +
Sbjct: 1028 ---KRDEEALGSYEKAIALKPDFADAYYNRAVLFYDLDRYEEALASYDRAIVLKPDFVEV 1084

Query: 282  YVHRAMLMLQARGNVDEAIKLIEKAISIDKSCMFAYETLGTIEVQRGRLEEAVKCFNKAL 341
            + +R   +L+ +   +EA+   EKAI++      A+   G   ++  R E+A+  + K L
Sbjct: 1085 FSNRGNALLKLK-RYEEALGSYEKAIALKPDFADAFFNQGNALLELKRYEDALWSYEKTL 1143

Query: 342  PLARDEAELSHIYSLRDAAIAQMKVCER-------YNIKKKVSPRSQNITKNEKLAIK 392
                D   LS           +MK+C+        + ++KK+    + +T    LAIK
Sbjct: 1144 ACKPDYDFLSGF-----CLYTRMKICDWSAFEDQVHQLEKKIECHEKVVTPFPLLAIK 1196



 Score = 56.6 bits (135), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 72/330 (21%), Positives = 141/330 (42%), Gaps = 30/330 (9%)

Query: 199  ALNPNFHVARAQRHFVVHKMIVPGDRERVEQSLKEFRNFVDTHSNVVEACTLFAQVLVDQ 258
             L+ N    + QR   +H+    G  +  E   +E  + +  H    +A  L A +   +
Sbjct: 2264 GLSTNEESVKLQRALKLHQ---EGRLDEAEAICQEILSSIPEH---FDALQLSATIAAQR 2317

Query: 259  EDFDGAEEYFNRSIRVDPENASLYVHRAMLMLQARGNVDEAIKLIEKAISIDKSCMFAYE 318
             D + A   F++++ + P++A    +R  + LQ     +EA+   E+ +++      AY 
Sbjct: 2318 HDSEKALALFDQALAIKPDHARSLNNRG-IALQELKRYEEALASYERLLAVKPDYAMAYS 2376

Query: 319  TLGTIEVQRGRLEEAVKCFNKALPLARDEAELSHIYSLRDAAIAQMK----VCERYNIKK 374
              G       R EEAV  +++A+ L  D A   + YS R  A+ ++K      E ++   
Sbjct: 2377 NRGNTLQGLRRYEEAVSSYDQAIALRSDNA---NAYSNRGVAMMKLKRYADALESHDKAI 2433

Query: 375  KVSPRSQNITKNEKLAIKQLRENNDIIIRPADKGGKTVVMDKADYTQKMTSILNSND--- 431
             + P       N    +++L+   + ++       K  +  K+DY +  ++  N  +   
Sbjct: 2434 ALRPDYAEACSNRGNTLQELKRYEEALM-----SYKQAIALKSDYAEFYSNYGNVLEELK 2488

Query: 432  -YEIIPGDPTKTI----EESEKYGNLENESGQKHAASDFTKAFADLDEAEKVDPNVADSY 486
             YE    +  + I    + S+ Y NL N          +  A A  D+A  ++P+  ++Y
Sbjct: 2489 RYEEALLNYEQAIALKPDFSDAYSNLGN---TLQVLMRYRDALASYDKAIGLNPDCIEAY 2545

Query: 487  YQRGQIYCLFGQYEEALRNLDKTIALNPNF 516
              +G       +YEEAL + ++ +AL P +
Sbjct: 2546 CGQGNALLELMRYEEALVSYERALALKPEY 2575



 Score = 55.1 bits (131), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 65/282 (23%), Positives = 124/282 (43%), Gaps = 17/282 (6%)

Query: 87   EIESTSSNHTKALARLLRATVYIFTSQSTKAIEDLTQLVEDTSVDPKIKVNAHIKRAVVH 146
            EI S+S  H  AL   L AT+      S +A+    Q +      P  + N         
Sbjct: 835  EILSSSPEHFDALQ--LSATIAAQRHDSEQALVLFDQAISINPGHPGSRNNRGNA----- 887

Query: 147  LHAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHV 206
            L A   + +A    ++A ++ P+  D+Y  RG +     +YEEAL + ++ IA+ P+   
Sbjct: 888  LRALQRYEEALDSYEKALQLKPDYVDAYTNRGSVLLELKRYEEALASYERAIAIKPD--- 944

Query: 207  ARAQRHFVVHKMIVPGDRERVEQSLKEFRNFVDTHSNVVEACTLFAQVLVDQEDFDGAEE 266
                  F     +V    +R E++L  +   ++   +          VL++ + ++ A  
Sbjct: 945  ---HTEFYSDLAVVLLALKRYEEALATYERVLELRRDDPVVYNNRGNVLLELKRYEEALG 1001

Query: 267  YFNRSIRVDPENASLYVHRAMLMLQARGNVDEAIKLIEKAISIDKSCMFAYETLGTIEVQ 326
             + ++I ++P+ A  Y +  +     + + +EA+   EKAI++      AY     +   
Sbjct: 1002 SYEKAIALNPDYAEAYSNLGVTRKVLKRD-EEALGSYEKAIALKPDFADAYYNRAVLFYD 1060

Query: 327  RGRLEEAVKCFNKALPLARDEAELSHIYSLRDAAIAQMKVCE 368
              R EEA+  +++A+ L  D  E   ++S R  A+ ++K  E
Sbjct: 1061 LDRYEEALASYDRAIVLKPDFVE---VFSNRGNALLKLKRYE 1099



 Score = 55.1 bits (131), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 48/211 (22%), Positives = 99/211 (46%), Gaps = 10/211 (4%)

Query: 155 KAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQRHFV 214
           KA A  D+A  ++P+ + S   RG       +YE+ALR+ ++ +A+ P++  A   R  V
Sbjct: 81  KAVALFDQALNINPDHSGSLNNRGNALRSLQRYEDALRSFERAVAVKPDYADAYINRGNV 140

Query: 215 VHKMIVPGDRERVEQSLKEFRNFVDTHSNVVEACTLFAQVLVDQEDFDGAEEYFNRSIRV 274
           + +++      R E +L+ F   +    +   A       ++    ++ A   + ++I +
Sbjct: 141 LMELL------RCEDALESFEKAIALKPDYAPAYFNRGNAVMAMHRYEDALASYEKAIAL 194

Query: 275 DPENASLYVHRAMLMLQARGNVDEAIKLIEKAISIDKSCMFAYETLGTIEVQRGRLEEAV 334
           +P  A  Y ++  L LQ     D+A++  ++AI++      A+   G + +   R E A+
Sbjct: 195 NPCFADAYYNKG-LALQKLMRYDDALERYKQAIALKPDYTEAFLHQGNVFMALQRYENAL 253

Query: 335 KCFNKALPLARDEAELSHIYSLRDAAIAQMK 365
             +   + L  D+ E    Y+ R  A+ ++K
Sbjct: 254 LSYEHVIALNPDDVE---AYTNRGYALQELK 281



 Score = 50.4 bits (119), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 64/291 (21%), Positives = 130/291 (44%), Gaps = 40/291 (13%)

Query: 246 EACTLFAQVLVDQEDFDGAEEYFNRSIRVDPENASLYVHRAMLMLQARGNVDEAIKLIEK 305
           +A  L A +   + + + A   F++++ ++P+++    +R    L++    ++A++  E+
Sbjct: 64  DALQLLATIAAQRNESEKAVALFDQALNINPDHSGSLNNRGN-ALRSLQRYEDALRSFER 122

Query: 306 AISIDKSCMFAYETLGTIEVQRGRLEEAVKCFNKALPLARDEAELSHIYSLRDAAIAQMK 365
           A+++      AY   G + ++  R E+A++ F KA+ L  D A     Y  R  A+  M 
Sbjct: 123 AVAVKPDYADAYINRGNVLMELLRCEDALESFEKAIALKPDYAP---AYFNRGNAVMAMH 179

Query: 366 VCE----RYNIKKKVSPRSQNITKNEKLAIKQLRENNDIIIRPADKGGKTVVMDKADYT- 420
             E     Y     ++P   +   N+ LA+++L   +D + R      K  +  K DYT 
Sbjct: 180 RYEDALASYEKAIALNPCFADAYYNKGLALQKLMRYDDALER-----YKQAIALKPDYTE 234

Query: 421 ------------QKMTSILNSNDYEIIPGDPTKTIEESEKYGNLENESGQKHAASDFTK- 467
                       Q+  + L S ++ +I  +P    ++ E Y N      + +A  +  + 
Sbjct: 235 AFLHQGNVFMALQRYENALLSYEH-VIALNP----DDVEAYTN------RGYALQELKRY 283

Query: 468 --AFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNF 516
             A    D    +  + AD+Y  RG  +    +YE+AL + +  +AL P++
Sbjct: 284 GDALLSYDRVLALKCDDADAYNNRGNAFMALKRYEDALGSYNHVLALKPDY 334



 Score = 49.7 bits (117), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 58/272 (21%), Positives = 111/272 (40%), Gaps = 34/272 (12%)

Query: 145  VHLHAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNF 204
            + L     + +A A  +    V P+ A +Y  RG       +YEEA+ + D+ IAL  + 
Sbjct: 2346 IALQELKRYEEALASYERLLAVKPDYAMAYSNRGNTLQGLRRYEEAVSSYDQAIALRSDN 2405

Query: 205  HVARAQRHFVVHKMIVPGDR----------------------------ERVEQSLKEFRN 236
              A + R   + K+    D                             +R E++L  ++ 
Sbjct: 2406 ANAYSNRGVAMMKLKRYADALESHDKAIALRPDYAEACSNRGNTLQELKRYEEALMSYKQ 2465

Query: 237  FVDTHSNVVEACTLFAQVLVDQEDFDGAEEYFNRSIRVDPENASLYVHRAMLMLQARGNV 296
             +   S+  E  + +  VL + + ++ A   + ++I + P+ +  Y +     LQ     
Sbjct: 2466 AIALKSDYAEFYSNYGNVLEELKRYEEALLNYEQAIALKPDFSDAYSNLGN-TLQVLMRY 2524

Query: 297  DEAIKLIEKAISIDKSCMFAYETLGTIEVQRGRLEEAVKCFNKALPLARDEAELSHIYSL 356
             +A+   +KAI ++  C+ AY   G   ++  R EEA+  + +AL L   + E   +  L
Sbjct: 2525 RDALASYDKAIGLNPDCIEAYCGQGNALLELMRYEEALVSYERALAL---KPEYDFLPGL 2581

Query: 357  RDAAIAQMKVCERYNIKKKVSPRSQNITKNEK 388
                  +MK+C       +V    + I ++EK
Sbjct: 2582 --CLYTRMKICAWSAFDDQVHQLEKKIERHEK 2611



 Score = 48.1 bits (113), Expect = 0.013,   Method: Compositional matrix adjust.
 Identities = 45/195 (23%), Positives = 89/195 (45%), Gaps = 7/195 (3%)

Query: 152  DFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQR 211
            D  KA A  D+A  + P+ A S   RG       +YEEAL + ++ +A+ P++ +A + R
Sbjct: 2319 DSEKALALFDQALAIKPDHARSLNNRGIALQELKRYEEALASYERLLAVKPDYAMAYSNR 2378

Query: 212  HFVVHKMIVPGDRERVEQSLKEFRNFVDTHSNVVEACTLFAQVLVDQEDFDGAEEYFNRS 271
               +  +       R E+++  +   +   S+   A +     ++  + +  A E  +++
Sbjct: 2379 GNTLQGL------RRYEEAVSSYDQAIALRSDNANAYSNRGVAMMKLKRYADALESHDKA 2432

Query: 272  IRVDPENASLYVHRAMLMLQARGNVDEAIKLIEKAISIDKSCMFAYETLGTIEVQRGRLE 331
            I + P+ A    +R    LQ     +EA+   ++AI++       Y   G +  +  R E
Sbjct: 2433 IALRPDYAEACSNRGN-TLQELKRYEEALMSYKQAIALKSDYAEFYSNYGNVLEELKRYE 2491

Query: 332  EAVKCFNKALPLARD 346
            EA+  + +A+ L  D
Sbjct: 2492 EALLNYEQAIALKPD 2506



 Score = 43.1 bits (100), Expect = 0.39,   Method: Compositional matrix adjust.
 Identities = 36/140 (25%), Positives = 65/140 (46%), Gaps = 7/140 (5%)

Query: 210  QRHFVVHKMIVPGDRERVEQSLKEFRNFVDTHSNVVEACTLFAQVLVDQEDFDGAEEYFN 269
            QR   +H+    G  +  E   +E  +F   H    +A  L A +   + D + A   F+
Sbjct: 1630 QRALKLHQ---EGRLDEAEALYREILSFSPEH---FDALQLSATIAAQRHDSENALVLFD 1683

Query: 270  RSIRVDPENASLYVHRAMLMLQARGNVDEAIKLIEKAISIDKSCMFAYETLGTIEVQRGR 329
            +++ + P++A    +R  + LQ     +EA+   E+AI++    +  Y   G    +  R
Sbjct: 1684 QALAIKPDHARSLNNRG-IALQELKRYEEALASYERAIAVKPDFIEPYSNRGNTLQELKR 1742

Query: 330  LEEAVKCFNKALPLARDEAE 349
             EEA+ C++ A+ L  D AE
Sbjct: 1743 YEEALACYDSAIALKPDYAE 1762



 Score = 42.7 bits (99), Expect = 0.46,   Method: Compositional matrix adjust.
 Identities = 27/123 (21%), Positives = 59/123 (47%), Gaps = 6/123 (4%)

Query: 155  KAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQRHFV 214
            +A    ++A  + P+ AD+YY R  ++    +YEEAL + D+ I L P+F    + R   
Sbjct: 1032 EALGSYEKAIALKPDFADAYYNRAVLFYDLDRYEEALASYDRAIVLKPDFVEVFSNRGNA 1091

Query: 215  VHKMIVPGDRERVEQSLKEFRNFVDTHSNVVEACTLFAQVLVDQEDFDGAEEYFNRSIRV 274
            + K+      +R E++L  +   +    +  +A       L++ + ++ A   + +++  
Sbjct: 1092 LLKL------KRYEEALGSYEKAIALKPDFADAFFNQGNALLELKRYEDALWSYEKTLAC 1145

Query: 275  DPE 277
             P+
Sbjct: 1146 KPD 1148



 Score = 40.4 bits (93), Expect = 2.5,   Method: Compositional matrix adjust.
 Identities = 22/74 (29%), Positives = 35/74 (47%)

Query: 450 GNLENESGQKHAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKT 509
           G+L N      +   +  A    + A  V P+ AD+Y  RG +     + E+AL + +K 
Sbjct: 98  GSLNNRGNALRSLQRYEDALRSFERAVAVKPDYADAYINRGNVLMELLRCEDALESFEKA 157

Query: 510 IALNPNFHVARAQR 523
           IAL P++  A   R
Sbjct: 158 IALKPDYAPAYFNR 171



 Score = 38.9 bits (89), Expect = 7.6,   Method: Compositional matrix adjust.
 Identities = 22/100 (22%), Positives = 46/100 (46%), Gaps = 3/100 (3%)

Query: 153  FTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQRH 212
            + +A    ++A  + P+ AD+++ +G       +YE+AL + +KT+A  P++        
Sbjct: 1098 YEEALGSYEKAIALKPDFADAFFNQGNALLELKRYEDALWSYEKTLACKPDYDFLSG--- 1154

Query: 213  FVVHKMIVPGDRERVEQSLKEFRNFVDTHSNVVEACTLFA 252
            F ++  +   D    E  + +    ++ H  VV    L A
Sbjct: 1155 FCLYTRMKICDWSAFEDQVHQLEKKIECHEKVVTPFPLLA 1194



 Score = 38.5 bits (88), Expect = 8.3,   Method: Compositional matrix adjust.
 Identities = 23/72 (31%), Positives = 37/72 (51%), Gaps = 4/72 (5%)

Query: 468 AFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQRHFVW 527
           A    ++A  + P+ A +Y+ RG       +YE+AL + +K IALNP F    A  ++  
Sbjct: 150 ALESFEKAIALKPDYAPAYFNRGNAVMAMHRYEDALASYEKAIALNPCF----ADAYYNK 205

Query: 528 TSTLAELMAFSD 539
              L +LM + D
Sbjct: 206 GLALQKLMRYDD 217


>gi|427707117|ref|YP_007049494.1| hypothetical protein Nos7107_1704 [Nostoc sp. PCC 7107]
 gi|427359622|gb|AFY42344.1| Tetratricopeptide TPR_1 repeat-containing protein [Nostoc sp. PCC
           7107]
          Length = 552

 Score = 63.2 bits (152), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 51/202 (25%), Positives = 92/202 (45%), Gaps = 7/202 (3%)

Query: 147 LHAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHV 206
           L +     +A A    A K++P +A++Y   G +    G+ +EAL      I L+     
Sbjct: 72  LRSQQKLDEALAAYQTAIKINPKLANAYNGLGNVLRDQGKLDEALATYKIAIKLDGKLAN 131

Query: 207 ARAQRHFVVHKMIVPGDRERVEQSLKEFRNFVDTHSNVVEACTLFAQVLVDQEDFDGAEE 266
           A      V+       ++ ++ +S+  ++  +               VL+ Q   D A  
Sbjct: 132 AYNGMGNVLS------EQGKLNESIAAYQKSIQLDPKNALPYNGMGNVLIYQGKLDEAIA 185

Query: 267 YFNRSIRVDPENASLYVHRAMLMLQARGNVDEAIKLIEKAISIDKSCMFAYETLGTIEVQ 326
            + ++I+ DP+ A  Y H   L L  +  +DEA+   +KAI ID     AY +LG    +
Sbjct: 186 SYRKAIQFDPKYAVTY-HNLGLALYNQKKLDEALAAYKKAIQIDPKYTSAYVSLGLALSE 244

Query: 327 RGRLEEAVKCFNKALPLARDEA 348
           +G+L+EA+  + +AL L  D++
Sbjct: 245 QGKLDEAMAKYRQALSLPEDKS 266



 Score = 53.1 bits (126), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 51/223 (22%), Positives = 104/223 (46%), Gaps = 19/223 (8%)

Query: 130 VDPKIKVNAHIKRAVVHLHAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEE 189
           ++PK+  NA+     V L       +A A    A K+D  +A++Y   G +    G+  E
Sbjct: 91  INPKL-ANAYNGLGNV-LRDQGKLDEALATYKIAIKLDGKLANAYNGMGNVLSEQGKLNE 148

Query: 190 ALRNLDKTIALNP-NFHVARAQRHFVVHKMIVPGDRERVEQSLKEFRNFVDTHSNVVEAC 248
           ++    K+I L+P N        + ++++        ++++++  +R  +          
Sbjct: 149 SIAAYQKSIQLDPKNALPYNGMGNVLIYQ-------GKLDEAIASYRKAIQFDPKYAVTY 201

Query: 249 TLFAQVLVDQEDFDGAEEYFNRSIRVDPENASLYVHRAMLMLQARGNVDEAIKLIEKAIS 308
                 L +Q+  D A   + ++I++DP+  S YV    L L  +G +DEA+    +A+S
Sbjct: 202 HNLGLALYNQKKLDEALAAYKKAIQIDPKYTSAYVSLG-LALSEQGKLDEAMAKYRQALS 260

Query: 309 I--DKSCM------FAYETLGTIEVQRGRLEEAVKCFNKALPL 343
           +  DKS         A+  LG    ++G+L+EA++ + +A+ +
Sbjct: 261 LPEDKSATPTTVHTLAHNNLGFALQRQGKLKEAIEEYKQAISI 303



 Score = 41.2 bits (95), Expect = 1.3,   Method: Compositional matrix adjust.
 Identities = 42/203 (20%), Positives = 86/203 (42%), Gaps = 19/203 (9%)

Query: 147 LHAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHV 206
           L       ++ A   ++ ++DP  A  Y   G +    G+ +EA+ +  K I  +P + V
Sbjct: 140 LSEQGKLNESIAAYQKSIQLDPKNALPYNGMGNVLIYQGKLDEAIASYRKAIQFDPKYAV 199

Query: 207 ARAQRHFVVHKMIVPGDRERVEQSLKEFRNFVDTHSNVVEACTLFAQVLVDQEDFDGAEE 266
                   ++      ++++++++L  ++  +        A       L +Q   D A  
Sbjct: 200 TYHNLGLALY------NQKKLDEALAAYKKAIQIDPKYTSAYVSLGLALSEQGKLDEAMA 253

Query: 267 YFNRSIRVDPENAS--------LYVHRAMLMLQARGNVDEAIKLIEKAISIDKSCMFAYE 318
            + +++ + PE+ S        L  +     LQ +G + EAI+  ++AISID + + A  
Sbjct: 254 KYRQALSL-PEDKSATPTTVHTLAHNNLGFALQRQGKLKEAIEEYKQAISIDSNFVTAQT 312

Query: 319 TLGTIE----VQRGRLEEAVKCF 337
            L   E    +QR   EE++   
Sbjct: 313 NLKEAERLLALQRNPQEESLASI 335


>gi|404366637|ref|ZP_10972019.1| hypothetical protein FUAG_01830 [Fusobacterium ulcerans ATCC 49185]
 gi|313689480|gb|EFS26315.1| hypothetical protein FUAG_01830 [Fusobacterium ulcerans ATCC 49185]
          Length = 559

 Score = 63.2 bits (152), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 66/260 (25%), Positives = 120/260 (46%), Gaps = 25/260 (9%)

Query: 152 DFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQR 211
           D  K   +L+E  +++PN A+ Y  RG       +YEEA+ + +K I L+PN  V    R
Sbjct: 7   DTLKEIEELNEKIRLNPNNANFYNSRGNCNYFLKKYEEAVIDYNKAIELDPNNAVYYNLR 66

Query: 212 HFVVHKMIVPGDRERVEQSLKEFRNFVDTHSNVVEACTLFAQVLVDQEDFDGAEEYFNRS 271
               H +      ++ ++++ ++   ++   N         +     ED++ A   +N++
Sbjct: 67  GNCNHFL------KKYKEAIIDYNKAIELDPNNATYYNNRGKTKYSLEDYENAIIDYNKA 120

Query: 272 IRVDPENASLYVHRAMLMLQARGNVDEAIKLIEKAISIDKSCMFAYETLGTIEVQRGRLE 331
           I V+P     Y++  +     + N  EA+K  E AI ++ +    Y   G I+      +
Sbjct: 121 IEVNPNEEIYYIYCGICNYNLK-NYKEALKNFENAIQLNPNNATYYNNRGKIKYFLEDYK 179

Query: 332 EAVKCFNKALPLA-------RDEAELSHIY-SLRDAAIAQMKVCERYN-------IKKKV 376
           +A+K ++KAL L        ++ AE  ++  + +DA I   K  E  N       IKKK+
Sbjct: 180 KAIKDYDKALELNPYAAITYKNRAESKYMLENYKDALIDINKAIELNNADETFIEIKKKI 239

Query: 377 SPRSQNITKNEKLAIKQLRE 396
               + IT+N K  IK++ E
Sbjct: 240 ---EKAITENSKPEIKKVNE 256



 Score = 53.9 bits (128), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 63/263 (23%), Positives = 122/263 (46%), Gaps = 26/263 (9%)

Query: 74  HEDYLTAIRHCTEEIESTSSNHTKALARLLRATVYIFTSQSTKAIEDLTQLVEDTSVDPK 133
           ++D L  I    E+I    +N   A     R     F  +  +A+ D  + +E   +DP 
Sbjct: 5   NQDTLKEIEELNEKIRLNPNN---ANFYNSRGNCNYFLKKYEEAVIDYNKAIE---LDPN 58

Query: 134 IKVNAHIKRAVVHLHAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRN 193
             V  +++    H      + +A  D ++A ++DPN A  Y  RG+       YE A+ +
Sbjct: 59  NAVYYNLRGNCNHF--LKKYKEAIIDYNKAIELDPNNATYYNNRGKTKYSLEDYENAIID 116

Query: 194 LDKTIALNPNFHVARAQRHFVVHKMIVPGDRERVEQSLKEFRNFVDTHSNVVEACTLFAQ 253
            +K I +NPN  +      + ++  I   + +  +++LK F N +  + N         +
Sbjct: 117 YNKAIEVNPNEEI------YYIYCGICNYNLKNYKEALKNFENAIQLNPNNATYYNNRGK 170

Query: 254 VLVDQEDFDGAEEYFNRSIRVDPENASLYVHRA--MLMLQARGNVDEAIKLIEKAISIDK 311
           +    ED+  A + +++++ ++P  A  Y +RA    ML+   N  +A+  I KAI ++ 
Sbjct: 171 IKYFLEDYKKAIKDYDKALELNPYAAITYKNRAESKYMLE---NYKDALIDINKAIELNN 227

Query: 312 SCMFAYETLGTIEVQRGRLEEAV 334
               A ET   IE+++ ++E+A+
Sbjct: 228 ----ADETF--IEIKK-KIEKAI 243


>gi|50312239|ref|XP_456151.1| hypothetical protein [Kluyveromyces lactis NRRL Y-1140]
 gi|49645287|emb|CAG98859.1| KLLA0F24046p [Kluyveromyces lactis]
          Length = 604

 Score = 63.2 bits (152), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 75/312 (24%), Positives = 136/312 (43%), Gaps = 20/312 (6%)

Query: 75  EDYLTAIRHCTEEIESTSSNHT-KALARLLRATVYIFTSQSTKAIEDLTQLVEDTSVDPK 133
           E++  A     +E+ES+  N + K  A +    V IF       I     L E  S++P+
Sbjct: 290 EEFTKAAELYKKELESSPDNESLKKKAAIAFEHVGIFKFFKNDPITAHINLEESLSLNPR 349

Query: 134 IKVNAHIKRAVVHLHAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRN 193
                ++   +     A+ + + F   D+A ++DPN +  YY RGQ++ +   ++EA  +
Sbjct: 350 PSTYIYMALIMADKGEANQYKEYF---DKALELDPNCSAVYYHRGQMHFVVENFKEAGAD 406

Query: 194 LDKTIALNPNFHVARAQRHFVVHKMIVPGDR-ERVEQSLKEFRNFVDTHSNVVEACTLFA 252
            DK   LNP    A  Q   +  +     DR +  E    E R    T   V      +A
Sbjct: 407 FDKAKELNPENIFAYIQCACLAFR----DDRFDDCETLFSEARRKFPTAPEVP---NFYA 459

Query: 253 QVLVDQEDFDGAEEYFNRSIRVDPENASLYVHRAMLMLQARG--------NVDEAIKLIE 304
           ++L  +   D A + ++ +I+++     ++V  A ++ +A          N  EA +L E
Sbjct: 460 EILAAKNSLDAAIKQYDIAIKLEDALPGIHVGIAPMIGKATALIRNPTVENFVEASELFE 519

Query: 305 KAISIDKSCMFAYETLGTIEVQRGRLEEAVKCFNKALPLARDEAELSHIYSLRDAAIAQM 364
           +A  ID     A   L  +++Q+  +++A++ F  A  L+R   E     +  +A   Q 
Sbjct: 520 EACKIDPRSEQAKIGLAQLKLQQEEIDDAIQLFEDAADLSRSFDEKLQATTFAEATKVQK 579

Query: 365 KVCERYNIKKKV 376
           K+     IK K+
Sbjct: 580 KIRADPFIKGKI 591


>gi|182680104|ref|YP_001834250.1| hypothetical protein Bind_3201 [Beijerinckia indica subsp. indica
           ATCC 9039]
 gi|182635987|gb|ACB96761.1| TPR repeat-containing protein [Beijerinckia indica subsp. indica
           ATCC 9039]
          Length = 955

 Score = 63.2 bits (152), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 63/252 (25%), Positives = 108/252 (42%), Gaps = 44/252 (17%)

Query: 131 DPKIKVNAHIKRAVVHLHAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEA 190
           DP+ ++N    R  V L   S F +A A  D+A     +   ++Y +G      G+  EA
Sbjct: 255 DPETELN----RGNV-LQKLSRFEEAIACYDQALLYRAHYPQAFYNKGIALQGLGKPHEA 309

Query: 191 LRNLDKTIALNPNFHVARAQRHFVVHKMIVPGDRERVEQSLKEFRNFVDTHSNVVEACTL 250
           L   D  + L P++  A   R  ++H++      +R+  +L  +R  +    + + A T 
Sbjct: 310 LAAYDAALGLEPSYCEAWCNRGNILHEL------KRLPDALLSYREALKVRPHFLPALTN 363

Query: 251 FAQVLVDQEDFDGAEEYFNRSIRVDPENA-SLYVHRAML--------------------- 288
            A VL++   F+ A      +++ DP +A +L +  A+L                     
Sbjct: 364 RANVLLELNRFEEALHSCTEALKHDPNHARALGISGAILHKLSRFHEALEALDKAAALNP 423

Query: 289 -----------MLQARGNVDEAIKLIEKAISIDKSCMFAYETLGTIEVQRGRLEEAVKCF 337
                      +LQ  G + EAI   EKA+++      A   LG    ++GR  EA+ CF
Sbjct: 424 ASPEVALNRGNVLQELGRLPEAIAAYEKALALKNPYPEALSGLGVALKEQGRFNEALACF 483

Query: 338 NKALPLARDEAE 349
           ++AL L  D A+
Sbjct: 484 DQALDLKPDFAD 495



 Score = 44.7 bits (104), Expect = 0.12,   Method: Compositional matrix adjust.
 Identities = 42/161 (26%), Positives = 71/161 (44%), Gaps = 10/161 (6%)

Query: 134 IKVNAHIKRAVVH----LHAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEE 189
           +KV  H   A+ +    L   + F +A     EA K DPN A +    G I     ++ E
Sbjct: 351 LKVRPHFLPALTNRANVLLELNRFEEALHSCTEALKHDPNHARALGISGAILHKLSRFHE 410

Query: 190 ALRNLDKTIALNPNFHVARAQRHFVVHKMIVPGDRERVEQSLKEFRNFVDTHSNVVEACT 249
           AL  LDK  ALNP        R  V+ ++       R+ +++  +   +   +   EA +
Sbjct: 411 ALEALDKAAALNPASPEVALNRGNVLQEL------GRLPEAIAAYEKALALKNPYPEALS 464

Query: 250 LFAQVLVDQEDFDGAEEYFNRSIRVDPENASLYVHRAMLML 290
                L +Q  F+ A   F++++ + P+ A    +RA L+L
Sbjct: 465 GLGVALKEQGRFNEALACFDQALDLKPDFADARNNRAGLLL 505


>gi|451819922|ref|YP_007456123.1| TPR repeat-containing protein [Clostridium
           saccharoperbutylacetonicum N1-4(HMT)]
 gi|451785901|gb|AGF56869.1| TPR repeat-containing protein [Clostridium
           saccharoperbutylacetonicum N1-4(HMT)]
          Length = 759

 Score = 63.2 bits (152), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 71/271 (26%), Positives = 112/271 (41%), Gaps = 46/271 (16%)

Query: 255 LVDQEDFDGAEEYFNRSIRVDPENASLYVHRAMLMLQARGNVDEAIKLIEKAISIDKSCM 314
           L+D  ++    E  N  I  D  NA  Y  +  L L+  G  +EAI+   KAI +     
Sbjct: 496 LLDNNEYTKLLEKSNEIINTDINNAKAYFVKG-LTLRKSGQNEEAIECYNKAIELKPDYA 554

Query: 315 FAYETLGTIEVQRGRLEEAVKCFNKALPLARDEAELSHIYSLRDAAIAQM----KVCERY 370
             Y   G I    G+ EEA++C++KA+ L  D  +    Y+ + +A+  +    +  E Y
Sbjct: 555 EVYNNKGNILQDLGQNEEAIECYDKAIELNPDYVKA---YNNKGSALQNLGQNEEAIECY 611

Query: 371 NIKKKVSPRSQNITKNEKLAIKQLRENNDIIIRPADKGGKTVVMDKADYTQKMTSILNSN 430
           +  K++SP   N                                    Y  K T+++N  
Sbjct: 612 DKAKELSPDYVNA-----------------------------------YYNKGTALMNLG 636

Query: 431 DYEIIPGDPTKTIEESEKYGNLENESGQ--KHAASDFTKAFADLDEAEKVDPNVADSYYQ 488
             E   G   K IE S  Y N  N  G   K+   +  +A    D+A ++ P+  ++Y  
Sbjct: 637 QDEEAIGCYDKAIELSPDYVNAYNNKGTALKNLGQN-EEAIECYDKAIELSPDYVNAYNN 695

Query: 489 RGQIYCLFGQYEEALRNLDKTIALNPNFHVA 519
           +G +    GQ EEA+   DK I LNP++  A
Sbjct: 696 KGNVLQNLGQNEEAIECYDKAIELNPDYAKA 726



 Score = 62.4 bits (150), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 71/291 (24%), Positives = 135/291 (46%), Gaps = 22/291 (7%)

Query: 63  DLLSKAKRAFEHEDYLTAIRHCTEEIESTSSNHTKALARLLRATVYIF-TSQSTKAIEDL 121
           DL+ K       ED +  I H  E+ +      T  L +L   +  +   ++ TK +E  
Sbjct: 453 DLIDKCIIVVISEDGMVNIIHNGEDYKEEK---TLNLNKLFNESKRLLDNNEYTKLLEKS 509

Query: 122 TQLVEDTSVDPKIKVNAHIKRAVVHLHAASDFTKAFADLDEAEKVDPNVADSYYQRGQIY 181
            +++ +T ++      A+  + +  L  +    +A    ++A ++ P+ A+ Y  +G I 
Sbjct: 510 NEII-NTDIN---NAKAYFVKGLT-LRKSGQNEEAIECYNKAIELKPDYAEVYNNKGNIL 564

Query: 182 CLFGQYEEALRNLDKTIALNPNFHVARAQRHFVVHKMIVPGDRERVE--QSLKEFR-NFV 238
              GQ EEA+   DK I LNP++  A   +   +  +    + E +E     KE   ++V
Sbjct: 565 QDLGQNEEAIECYDKAIELNPDYVKAYNNKGSALQNL--GQNEEAIECYDKAKELSPDYV 622

Query: 239 DTHSNVVEACTLFAQVLVDQEDFDGAEEYFNRSIRVDPENASLYVHRAMLMLQARGNVDE 298
           + + N   A     Q   D+E    A   ++++I + P+  + Y ++    L+  G  +E
Sbjct: 623 NAYYNKGTALMNLGQ---DEE----AIGCYDKAIELSPDYVNAYNNKGT-ALKNLGQNEE 674

Query: 299 AIKLIEKAISIDKSCMFAYETLGTIEVQRGRLEEAVKCFNKALPLARDEAE 349
           AI+  +KAI +    + AY   G +    G+ EEA++C++KA+ L  D A+
Sbjct: 675 AIECYDKAIELSPDYVNAYNNKGNVLQNLGQNEEAIECYDKAIELNPDYAK 725



 Score = 52.8 bits (125), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 75/314 (23%), Positives = 146/314 (46%), Gaps = 27/314 (8%)

Query: 39  ILQPDGLSNGVELTNG-DTNESHELDL---LSKAKRAFEHEDYLTAIRHCTEEIESTSSN 94
           ++  DG+ N +   NG D  E   L+L    +++KR  ++ +Y T +   + EI +T  N
Sbjct: 462 VISEDGMVNIIH--NGEDYKEEKTLNLNKLFNESKRLLDNNEY-TKLLEKSNEIINTDIN 518

Query: 95  HTKALARLLRATVYIFTSQSTKAIEDLTQLVEDTSVDPKIKVNAHIKRAVVHLHAASDFT 154
           + KA    ++      + Q+ +AIE   + +E   + P      + K  +  L       
Sbjct: 519 NAKAY--FVKGLTLRKSGQNEEAIECYNKAIE---LKPDYAEVYNNKGNI--LQDLGQNE 571

Query: 155 KAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQRHFV 214
           +A    D+A +++P+   +Y  +G      GQ EEA+   DK   L+P++  A   +   
Sbjct: 572 EAIECYDKAIELNPDYVKAYNNKGSALQNLGQNEEAIECYDKAKELSPDYVNAYYNKGTA 631

Query: 215 VHKMIVPGDRERV---EQSLKEFRNFVDTHSNVVEACTLFAQVLVDQEDFDGAEEYFNRS 271
           +  M +  D E +   +++++   ++V+ ++N   A     Q   ++E    A E ++++
Sbjct: 632 L--MNLGQDEEAIGCYDKAIELSPDYVNAYNNKGTALKNLGQ---NEE----AIECYDKA 682

Query: 272 IRVDPENASLYVHRAMLMLQARGNVDEAIKLIEKAISIDKSCMFAYETLGTIEVQRGRLE 331
           I + P+  + Y ++   +LQ  G  +EAI+  +KAI ++     AY   G      G+ E
Sbjct: 683 IELSPDYVNAYNNKGN-VLQNLGQNEEAIECYDKAIELNPDYAKAYYNKGNALKILGKNE 741

Query: 332 EAVKCFNKALPLAR 345
           +A  CF K   L +
Sbjct: 742 KANICFEKYEELKK 755


>gi|334120476|ref|ZP_08494556.1| Tetratricopeptide TPR_1 repeat-containing protein [Microcoleus
           vaginatus FGP-2]
 gi|333456454|gb|EGK85086.1| Tetratricopeptide TPR_1 repeat-containing protein [Microcoleus
           vaginatus FGP-2]
          Length = 726

 Score = 63.2 bits (152), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 47/183 (25%), Positives = 87/183 (47%), Gaps = 7/183 (3%)

Query: 165 KVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQRHFVVHKMIVPGDR 224
           ++ P+ A +Y   G +    GQ EEA+R   + IALNP+F  A A    +++K      +
Sbjct: 45  ELQPDWAAAYVTMGNVQQASGQIEEAMRFYSEAIALNPDFAEAYANLGSMLYK------Q 98

Query: 225 ERVEQSLKEFRNFVDTHSNVVEACTLFAQVLVDQEDFDGAEEYFNRSIRVDPENASLYVH 284
             + +++  +   ++   N+  A    A  L  Q   D A  Y  +++ ++P  A +  H
Sbjct: 99  GHLVEAIVNYEKAIELKPNLAAAYWNLAGALKQQGQSDAAVAYEQKALELNPHLAEVDFH 158

Query: 285 RAMLMLQAR-GNVDEAIKLIEKAISIDKSCMFAYETLGTIEVQRGRLEEAVKCFNKALPL 343
             +    AR G +DEA+   ++AI+       AY  +G +   +G+ ++A+    KAL +
Sbjct: 159 LNLGDKLARQGKLDEAVAAWQQAIAFKPDLAEAYCQIGRVLRHQGQFKDAIPNLQKALEI 218

Query: 344 ARD 346
             D
Sbjct: 219 KPD 221



 Score = 42.0 bits (97), Expect = 0.80,   Method: Compositional matrix adjust.
 Identities = 27/97 (27%), Positives = 52/97 (53%), Gaps = 1/97 (1%)

Query: 247 ACTLFAQVLVDQEDFDGAEEYFNRSIRVDPENASLYVHRAMLMLQARGNVDEAIKLIEKA 306
           + T+ A+    Q +   A     R++ + P+ A+ YV    +  QA G ++EA++   +A
Sbjct: 19  SLTVVAETYYSQGNLAAAVAACRRALELQPDWAAAYVTMGNVQ-QASGQIEEAMRFYSEA 77

Query: 307 ISIDKSCMFAYETLGTIEVQRGRLEEAVKCFNKALPL 343
           I+++     AY  LG++  ++G L EA+  + KA+ L
Sbjct: 78  IALNPDFAEAYANLGSMLYKQGHLVEAIVNYEKAIEL 114



 Score = 40.4 bits (93), Expect = 2.2,   Method: Compositional matrix adjust.
 Identities = 49/229 (21%), Positives = 101/229 (44%), Gaps = 39/229 (17%)

Query: 292 ARGNVDEAIKLIEKAISIDKSCMFAYETLGTIEVQRGRLEEAVKCFNKALPLARDEAE-L 350
           ++GN+  A+    +A+ +      AY T+G ++   G++EEA++ +++A+ L  D AE  
Sbjct: 29  SQGNLAAAVAACRRALELQPDWAAAYVTMGNVQQASGQIEEAMRFYSEAIALNPDFAEAY 88

Query: 351 SHIYSLRDAAIAQMKVCERYNIKKKVSPRSQNITKNEKLAIKQLRENNDIIIRPADKGGK 410
           +++ S+       ++    Y    ++ P       N   A+KQ  +++  +         
Sbjct: 89  ANLGSMLYKQGHLVEAIVNYEKAIELKPNLAAAYWNLAGALKQQGQSDAAVA-------- 140

Query: 411 TVVMDKADYTQKMTSI---LNSNDYEIIPGDPTKTIEESEKYGNLENESGQKHAASDFTK 467
                   Y QK   +   L   D+ +  GD      +  + G L+             +
Sbjct: 141 --------YEQKALELNPHLAEVDFHLNLGD------KLARQGKLD-------------E 173

Query: 468 AFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNF 516
           A A   +A    P++A++Y Q G++    GQ+++A+ NL K + + P+F
Sbjct: 174 AVAAWQQAIAFKPDLAEAYCQIGRVLRHQGQFKDAIPNLQKALEIKPDF 222



 Score = 38.5 bits (88), Expect = 9.6,   Method: Compositional matrix adjust.
 Identities = 33/105 (31%), Positives = 52/105 (49%), Gaps = 1/105 (0%)

Query: 264 AEEYFNRSIRVDPENASLYVHRAMLMLQARGNVDEAIKLIEKAISIDKSCMFAYETLGTI 323
           A  +++ +I ++P+ A  Y +    ML  +G++ EAI   EKAI +  +   AY  L   
Sbjct: 70  AMRFYSEAIALNPDFAEAYANLGS-MLYKQGHLVEAIVNYEKAIELKPNLAAAYWNLAGA 128

Query: 324 EVQRGRLEEAVKCFNKALPLARDEAELSHIYSLRDAAIAQMKVCE 368
             Q+G+ + AV    KAL L    AE+    +L D    Q K+ E
Sbjct: 129 LKQQGQSDAAVAYEQKALELNPHLAEVDFHLNLGDKLARQGKLDE 173


>gi|255731746|ref|XP_002550797.1| hypothetical protein CTRG_05095 [Candida tropicalis MYA-3404]
 gi|240131806|gb|EER31365.1| hypothetical protein CTRG_05095 [Candida tropicalis MYA-3404]
          Length = 593

 Score = 63.2 bits (152), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 82/354 (23%), Positives = 148/354 (41%), Gaps = 30/354 (8%)

Query: 22  PSKQFIKTYLKSFPNDPILQPDGLSNGVELTNGDTNESHELDLLSKAKRAFEH--EDYLT 79
           PS   I ++  +F  +   +P+G++      N +       D L K     +H  E+  T
Sbjct: 241 PSAATIGSFFGAFVEES--EPEGINE-----NSEGGAKFLYDALQKINANTQHGYEEADT 293

Query: 80  AIRHCTEEIESTSSNHTKALARLLRATVYIFTSQSTKAIEDLTQLVEDTSVDPKIKVNAH 139
            I      +E    +  KA+A    A      +  T A E + + +   S+ P+ +  A+
Sbjct: 294 LINQAVSNLED--EDPVKAVALEYLAAFQFLKNDPTSAFESIEKAI---SLKPRAR--AY 346

Query: 140 IKRAVVHLHAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIA 199
           + RA+++   +S +  A  D   AE +D    D +Y  GQ++ L G    A  N +K   
Sbjct: 347 VFRALINADKSS-YDAALKDFKAAEDLDSECPDIFYHLGQLHYLTGDLANAETNFNKAKE 405

Query: 200 LNPNFHVARAQRHFVVHKMIVPGDRERVEQSLKEFRNFVDTHSNVVEACTLFAQVLVDQE 259
           L+P+   A  Q   + +K    G  +   +   E +    T     E    + ++L D+ 
Sbjct: 406 LHPDNVYAYIQLACITYKN---GQTDLANEKFTEAKLKFPTSP---EVPNYYGEILADKG 459

Query: 260 DFDGAEEYFNRSIRVDPENASLYVHRAMLMLQAR-------GNVDEAIKLIEKAISIDKS 312
           D  GA + F  + R+  +     V    L+ +A          + EA +L+ KA +ID  
Sbjct: 460 DIQGACKQFEIASRLQEKLDRFSVGALPLINEATVISRESLERIGEAEELLTKACAIDPK 519

Query: 313 CMFAYETLGTIEVQRGRLEEAVKCFNKALPLARDEAELSHIYSLRDAAIAQMKV 366
              A  +L  I++Q+  +++AV  F ++  LAR   E     S  +A   Q ++
Sbjct: 520 SELARISLAQIKLQKDEVDDAVVLFEESSDLARSIEEKIQATSFAEATKMQKRI 573


>gi|150009279|ref|YP_001304022.1| hypothetical protein BDI_2681 [Parabacteroides distasonis ATCC
           8503]
 gi|149937703|gb|ABR44400.1| TPR-domain containing protein [Parabacteroides distasonis ATCC
           8503]
          Length = 321

 Score = 63.2 bits (152), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 50/189 (26%), Positives = 90/189 (47%), Gaps = 17/189 (8%)

Query: 101 RLLRATVYIFTSQSTKAIEDLTQLVEDTSVDPKIKVNAHIKRAVVHLHAASDFTKAFADL 160
           RL R  +     +  + I D   ++E   ++P   V A+   A     A +D   A ADL
Sbjct: 99  RLTRVNLLFMLDKDAEVITDCLHVIE---LEPSNHV-AYFMMAKAK-KATNDVFGAIADL 153

Query: 161 DEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNP---NFHVARAQRHFVVHK 217
             +  +  + AD+Y  R +I    GQ +EAL +++K I + P   + ++ R + H  +  
Sbjct: 154 TRSISLKEDFADAYLLRAEILLGLGQAKEALPDVEKAIEIVPEEESSYLLRGRIHMAL-- 211

Query: 218 MIVPGDRERVEQSLKEFRNFVDTHSNVVEACTLFAQVLVDQEDFDGAEEYFNRSIRVDPE 277
               GD   +E +  +F+  +D +    +AC L  Q+L++Q+ +D A  +F+ +I  +P 
Sbjct: 212 ----GD---IEAANSDFQQVLDLNPFNEDACILSGQLLIEQKKYDEAIAFFDEAIETNPS 264

Query: 278 NASLYVHRA 286
            A  Y  R 
Sbjct: 265 FAKAYSERG 273


>gi|298376932|ref|ZP_06986886.1| TPR-domain containing protein [Bacteroides sp. 3_1_19]
 gi|298265916|gb|EFI07575.1| TPR-domain containing protein [Bacteroides sp. 3_1_19]
          Length = 321

 Score = 63.2 bits (152), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 50/189 (26%), Positives = 90/189 (47%), Gaps = 17/189 (8%)

Query: 101 RLLRATVYIFTSQSTKAIEDLTQLVEDTSVDPKIKVNAHIKRAVVHLHAASDFTKAFADL 160
           RL R  +     +  + I D   ++E   ++P   V A+   A     A +D   A ADL
Sbjct: 99  RLTRVNLLFMLDKDAEVITDCLHVIE---LEPSNHV-AYFMMAKAK-KATNDVFGAIADL 153

Query: 161 DEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNP---NFHVARAQRHFVVHK 217
             +  +  + AD+Y  R +I    GQ +EAL +++K I + P   + ++ R + H  +  
Sbjct: 154 TRSISLKEDFADAYLLRAEILLGLGQAKEALPDVEKAIEIVPEEESSYLLRGRIHMAL-- 211

Query: 218 MIVPGDRERVEQSLKEFRNFVDTHSNVVEACTLFAQVLVDQEDFDGAEEYFNRSIRVDPE 277
               GD   +E +  +F+  +D +    +AC L  Q+L++Q+ +D A  +F+ +I  +P 
Sbjct: 212 ----GD---IEAANSDFQQVLDLNPFNEDACILSGQLLIEQKKYDEAIAFFDEAIETNPS 264

Query: 278 NASLYVHRA 286
            A  Y  R 
Sbjct: 265 FAKAYSERG 273


>gi|15896250|ref|NP_349599.1| hypothetical protein CA_C2998 [Clostridium acetobutylicum ATCC 824]
 gi|337738205|ref|YP_004637652.1| hypothetical protein SMB_G3034 [Clostridium acetobutylicum DSM
           1731]
 gi|384459716|ref|YP_005672136.1| hypothetical protein CEA_G3004 [Clostridium acetobutylicum EA 2018]
 gi|15026055|gb|AAK80939.1|AE007797_1 TPR-repeat-containing protein [Clostridium acetobutylicum ATCC 824]
 gi|325510405|gb|ADZ22041.1| TPR-repeat-containing protein [Clostridium acetobutylicum EA 2018]
 gi|336291505|gb|AEI32639.1| TPR repeat-containing protein [Clostridium acetobutylicum DSM 1731]
          Length = 362

 Score = 63.2 bits (152), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 62/217 (28%), Positives = 105/217 (48%), Gaps = 20/217 (9%)

Query: 127 DTSVDP---KIKVNAHIKRAVVHLHAA----SDFTKAFADLDEAEKVDPNVADSYYQRGQ 179
           D +VDP    IK+N     A ++  +A     ++T A + LDEA K+  N  D Y + G 
Sbjct: 146 DLAVDPLTEAIKINPKYYDAYLNKASALVNNKNYTDAKSCLDEALKLSTNKTDFYNKEGL 205

Query: 180 IYCLFGQYEEALRNLDKTIALNPNFHVARAQRHFVVHKMIVPGDRERVEQSLKEFRNFV- 238
           ++   G Y++A   LDK I+L+P   V         +K +V  D     +++  F   + 
Sbjct: 206 LFQSAGLYDDAKACLDKAISLSPKNAV------LYYNKGLVLTDSNNYTEAIDLFNKAIS 259

Query: 239 --DTHSNVVEACTLFAQVLVDQEDFDGAEEYFNRSIRVDPENASLYVHRAMLMLQARGNV 296
               +SN  +A  L  + L   ED   A + F+ +I+ +  N++ Y  +A  +L  +GN+
Sbjct: 260 LNSKYSNAYDAKGLALRSLNKLED---AVKEFDNAIKYNSYNSAAYNDKAC-VLADKGNL 315

Query: 297 DEAIKLIEKAISIDKSCMFAYETLGTIEVQRGRLEEA 333
           ++A+K I KAI I+      Y     I  + G+ +EA
Sbjct: 316 EDALKSINKAIEINPESKDFYTNKSFILKRMGKTKEA 352



 Score = 59.7 bits (143), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 68/283 (24%), Positives = 130/283 (45%), Gaps = 25/283 (8%)

Query: 64  LLSKAKRAFEHEDYLTAIRHCTEEIESTSSNHTKALARLLRATVYIFTSQSTKAIEDLTQ 123
            L KA  +  ++ Y  A+ + +  I S  SN T A+    +A  +I   +  +A+     
Sbjct: 30  FLEKANSSMANKQYTKALNYYSSAINSDKSN-TDAITG--KAYAFIMLKRYPEAV----- 81

Query: 124 LVEDTSVDPKIKVNAHIKRAVVH----LHAASDFTKAFADLDEAEKVDPNVADSYYQRGQ 179
               +  +  IK N ++ +A  +    L    ++  A   LD+A ++    + +  +RG 
Sbjct: 82  ----SCAESAIKQNKNLGKAYAYKGIALSRQGNYIDALKYLDKAIELKFKDSKTLNERGY 137

Query: 180 IYCLFGQYEEALRNLDKTIALNPNFHVARAQR-HFVVHKMIVPGDRERVEQSLKEFRNFV 238
                G+ + A+  L + I +NP ++ A   +   +V+       +  ++++LK   N  
Sbjct: 138 DLIKIGRSDLAVDPLTEAIKINPKYYDAYLNKASALVNNKNYTDAKSCLDEALKLSTNKT 197

Query: 239 DTHSNVVEACTLFAQVLVDQEDFDGAEEYFNRSIRVDPENASLYVHRAMLMLQARGNVDE 298
           D ++   +   LF    +    +D A+   +++I + P+NA LY ++  L+L    N  E
Sbjct: 198 DFYN---KEGLLFQSAGL----YDDAKACLDKAISLSPKNAVLYYNKG-LVLTDSNNYTE 249

Query: 299 AIKLIEKAISIDKSCMFAYETLGTIEVQRGRLEEAVKCFNKAL 341
           AI L  KAIS++     AY+  G       +LE+AVK F+ A+
Sbjct: 250 AIDLFNKAISLNSKYSNAYDAKGLALRSLNKLEDAVKEFDNAI 292



 Score = 38.9 bits (89), Expect = 7.7,   Method: Compositional matrix adjust.
 Identities = 23/67 (34%), Positives = 36/67 (53%)

Query: 464 DFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQR 523
           ++T A + LDEA K+  N  D Y + G ++   G Y++A   LDK I+L+P   V    +
Sbjct: 178 NYTDAKSCLDEALKLSTNKTDFYNKEGLLFQSAGLYDDAKACLDKAISLSPKNAVLYYNK 237

Query: 524 HFVWTST 530
             V T +
Sbjct: 238 GLVLTDS 244


>gi|427729657|ref|YP_007075894.1| hypothetical protein Nos7524_2456 [Nostoc sp. PCC 7524]
 gi|427365576|gb|AFY48297.1| tetratricopeptide repeat protein [Nostoc sp. PCC 7524]
          Length = 276

 Score = 63.2 bits (152), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 50/206 (24%), Positives = 102/206 (49%), Gaps = 19/206 (9%)

Query: 150 ASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARA 209
           + D + A AD ++A +++PN AD+Y  RG+   L G    A+ + ++ + +N N   A  
Sbjct: 62  SGDLSGAIADFNKAVQMNPNDADTYNNRGKARALSGDLPGAIADFNQALQINSNDADAYK 121

Query: 210 QRHFVVHKMIVPGDRERVEQSLKEFRNFVDTHSNVVEACTLFAQVLV--DQEDFDGAEEY 267
            R       ++ GD   +  ++ +F   +  + N  +A T +++ +   +  D  G+ E 
Sbjct: 122 NRG---KARVLSGD---LPGAIADFNQALQINPN--DADTYYSRGVARDNSGDLKGSIED 173

Query: 268 FNRSIRVDPENASLY----VHRAMLMLQARGNVDEAIKLIEKAISIDKSCMFAYETLGTI 323
           FN+++R++P     Y    V+RA+      G++  AI+   +A+ I+ +   +Y+  G  
Sbjct: 174 FNQALRINPNYVDAYNNRGVNRAL-----EGDLKSAIEDFNQALEINPNNADSYKNRGIA 228

Query: 324 EVQRGRLEEAVKCFNKALPLARDEAE 349
             Q G +++A+    KA  L + + E
Sbjct: 229 YSQLGDVKKAIADLQKAAELFQQQGE 254



 Score = 50.1 bits (118), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 47/203 (23%), Positives = 81/203 (39%), Gaps = 46/203 (22%)

Query: 104 RATVYIFTSQSTKAIEDLTQLVEDTSVDPKIKVNAHIKRAVVHLHAASDFTKAFADLDEA 163
           R      +     AI D  Q ++  S D     N    R +     + D   A AD ++A
Sbjct: 89  RGKARALSGDLPGAIADFNQALQINSNDADAYKNRGKARVL-----SGDLPGAIADFNQA 143

Query: 164 EKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQRHFVVHKMIVPGD 223
            +++PN AD+YY RG      G  + ++ + ++ + +NP                     
Sbjct: 144 LQINPNDADTYYSRGVARDNSGDLKGSIEDFNQALRINP--------------------- 182

Query: 224 RERVEQSLKEFRNFVDTHSNVVEACTLFAQVLVDQEDFDGAEEYFNRSIRVDPENASLYV 283
                       N+VD ++N      L       + D   A E FN+++ ++P NA  Y 
Sbjct: 183 ------------NYVDAYNNRGVNRAL-------EGDLKSAIEDFNQALEINPNNADSYK 223

Query: 284 HRAMLMLQARGNVDEAIKLIEKA 306
           +R +   Q  G+V +AI  ++KA
Sbjct: 224 NRGIAYSQL-GDVKKAIADLQKA 245



 Score = 41.6 bits (96), Expect = 1.2,   Method: Compositional matrix adjust.
 Identities = 17/55 (30%), Positives = 33/55 (60%)

Query: 462 ASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNF 516
           + D   A AD ++A +++PN AD+YY RG      G  + ++ + ++ + +NPN+
Sbjct: 130 SGDLPGAIADFNQALQINPNDADTYYSRGVARDNSGDLKGSIEDFNQALRINPNY 184



 Score = 41.6 bits (96), Expect = 1.2,   Method: Compositional matrix adjust.
 Identities = 30/99 (30%), Positives = 49/99 (49%), Gaps = 3/99 (3%)

Query: 419 YTQK-MTSILNSNDYEIIPGDPTKTIEESEKYGNLENESGQKHAAS-DFTKAFADLDEAE 476
           Y Q+ M S L S D      D  K ++ +    +  N  G+  A S D   A AD ++A 
Sbjct: 52  YKQRAMDSAL-SGDLSGAIADFNKAVQMNPNDADTYNNRGKARALSGDLPGAIADFNQAL 110

Query: 477 KVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPN 515
           +++ N AD+Y  RG+   L G    A+ + ++ + +NPN
Sbjct: 111 QINSNDADAYKNRGKARVLSGDLPGAIADFNQALQINPN 149



 Score = 41.2 bits (95), Expect = 1.4,   Method: Compositional matrix adjust.
 Identities = 59/241 (24%), Positives = 94/241 (39%), Gaps = 38/241 (15%)

Query: 274 VDPENASLYVHRAMLMLQARGNVDEAIKLIEKAISIDKSCMFAYETLGTIEVQRGRLEEA 333
           V+ E+   Y  RAM    + G++  AI    KA+ ++ +    Y   G      G L  A
Sbjct: 44  VNKEDYKFYKQRAMDSALS-GDLSGAIADFNKAVQMNPNDADTYNNRGKARALSGDLPGA 102

Query: 334 VKCFNKALPLARDEAELSHIYSLRDAAIAQMKVCERYNIKKKVSPRSQNITKNEKLAIKQ 393
           +  FN+AL +  ++A+                    Y  + K    S ++      AI  
Sbjct: 103 IADFNQALQINSNDADA-------------------YKNRGKARVLSGDLPG----AIAD 139

Query: 394 LRENNDIIIRPADKGGKTVVMDKAD-YTQKMTSILNSNDYEIIPGDPTKTIEESEKYGNL 452
              N  + I P D          AD Y  +  +  NS D +    D  + +  +  Y + 
Sbjct: 140 F--NQALQINPND----------ADTYYSRGVARDNSGDLKGSIEDFNQALRINPNYVDA 187

Query: 453 ENESGQKHA-ASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIA 511
            N  G   A   D   A  D ++A +++PN ADSY  RG  Y   G  ++A+ +L K   
Sbjct: 188 YNNRGVNRALEGDLKSAIEDFNQALEINPNNADSYKNRGIAYSQLGDVKKAIADLQKAAE 247

Query: 512 L 512
           L
Sbjct: 248 L 248


>gi|296125246|ref|YP_003632498.1| hypothetical protein [Brachyspira murdochii DSM 12563]
 gi|296017062|gb|ADG70299.1| TPR repeat-containing protein [Brachyspira murdochii DSM 12563]
          Length = 349

 Score = 63.2 bits (152), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 74/299 (24%), Positives = 126/299 (42%), Gaps = 44/299 (14%)

Query: 63  DLLSKAKRAFEHEDYLTAIRHCTEEIESTSSN----HTKALAR----------------- 101
           DLL  A  AF++EDY  AI +C + I     N    + + LA+                 
Sbjct: 4   DLLKLAYEAFDNEDYENAIEYCDKLIFYNGDNEGVYNYRGLAKSNLGKYKEALDDFNTAL 63

Query: 102 -LLRATVYIFTSQST---------KAIEDLTQLVE-DTSVDPKIKVNAHIKRAVVHLHAA 150
            L      I+ ++           KAIED T+ +E D S+D       +  R + +  A 
Sbjct: 64  KLDNNNADIYYNKGVTEYHMGDYDKAIEDYTKSIELDNSIDD-----VYNNRGLCY-SAL 117

Query: 151 SDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQ 210
            DF KA  D   A +++   +  YY RG        +E AL + DK I +NP +  A   
Sbjct: 118 GDFEKAIEDFTYAIELNNEDSQYYYNRGLAKDNLEDFESALDDYDKAIEINPKYSNAYNN 177

Query: 211 RHFVVHKMIVPGDRERVEQSLKEFRNFVDTHSNVVEACTLFAQVLVDQEDFDGAEEYFNR 270
           R     K  +  D E +   +K++   ++  +N + A    A      E+++ A   +N+
Sbjct: 178 RGNA--KAELNYDEEDI---IKDYDKAIELDNNNINAHFNKALYYDINENYEQALNIYNQ 232

Query: 271 SIRVDPENASLYVHRAMLMLQARGNVDEAIKLIEKAISIDKSCMFAYETLGTIEVQRGR 329
            + +D      Y +RA+++ +     DE+IK  +KAI +D      Y     I+++  +
Sbjct: 233 LLEIDEYYIEGYGNRALILYKLNK-YDESIKDCDKAIELDSKYWLLYLNRAEIKLEVAK 290



 Score = 42.7 bits (99), Expect = 0.51,   Method: Compositional matrix adjust.
 Identities = 51/257 (19%), Positives = 106/257 (41%), Gaps = 35/257 (13%)

Query: 268 FNRSIRVDPENASLYVHRAMLMLQARGNVDEAIKLIEKAISIDKSCMFAYETLGTIEVQR 327
           FN ++++D  NA +Y ++ +      G+ D+AI+   K+I +D S    Y   G      
Sbjct: 59  FNTALKLDNNNADIYYNKGVTEYHM-GDYDKAIEDYTKSIELDNSIDDVYNNRGLCYSAL 117

Query: 328 GRLEEAVKCFNKALPLARDEAELSHIYSLRDAAIAQMK-VCERYNIKKKVSPRSQNITKN 386
           G  E+A++ F  A+ L  ++++  +   L    +   +   + Y+   +++P+  N   N
Sbjct: 118 GDFEKAIEDFTYAIELNNEDSQYYYNRGLAKDNLEDFESALDDYDKAIEINPKYSNAYNN 177

Query: 387 EKLAIKQLRENNDIIIRPADKGGKTVVMDKADYTQKMTSILNSNDYEIIPGDPTKTIEES 446
              A  +L  + + II+  DK    + +D  +        L    Y+I            
Sbjct: 178 RGNAKAELNYDEEDIIKDYDKA---IELDNNNINAHFNKALY---YDI------------ 219

Query: 447 EKYGNLENESGQKHAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNL 506
                  NE+        + +A    ++  ++D    + Y  R  I     +Y+E++++ 
Sbjct: 220 -------NEN--------YEQALNIYNQLLEIDEYYIEGYGNRALILYKLNKYDESIKDC 264

Query: 507 DKTIALNPNFHVARAQR 523
           DK I L+  + +    R
Sbjct: 265 DKAIELDSKYWLLYLNR 281


>gi|266619147|ref|ZP_06112082.1| putative tetratricopeptide repeat-containing domain protein,
           partial [Clostridium hathewayi DSM 13479]
 gi|288869338|gb|EFD01637.1| putative tetratricopeptide repeat-containing domain protein
           [Clostridium hathewayi DSM 13479]
          Length = 560

 Score = 63.2 bits (152), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 87/335 (25%), Positives = 132/335 (39%), Gaps = 40/335 (11%)

Query: 152 DFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIAL---NPNFHVAR 208
           +F +A + L EA + + +       RG IY    +Y EAL        +   +P+    R
Sbjct: 84  EFKEALSHLAEAIRNNKDRMQYRLVRGNIYLDMKKYNEALTEYASAAEVYHDSPSLFFNR 143

Query: 209 AQRHFVVHKMIVPGDRERVEQSLKEFRNFVDTHSNVVEACTLFAQVLVDQ-------EDF 261
                    +   G + +V Q+ + F   ++      +AC   A    ++        DF
Sbjct: 144 G--------LCYEGKKMKV-QAAENFEKALELQEGYRDACEKLADYYREKYENQYRRADF 194

Query: 262 DGAEEYFNRSIRVDPENASLYVHRAMLMLQARGNVDEAIKLIEKAISIDKSCMFAYETLG 321
           D A  Y +R I V  EN    VHR ++ + A   +DEAI+  EKA++       AY  LG
Sbjct: 195 DTAIAYISRQIAV-TENCYYLVHRGLIYMNAM-ELDEAIRDFEKALTYVPEDWAAYNNLG 252

Query: 322 TIEVQRGRLEEAVKCFNKALPLARDEAEL---SHIYSLRDAAIAQMKVCERYNIKKKVSP 378
                 GR EEAVK F KA+    D   L   S++    +A     K  E Y    K+ P
Sbjct: 253 CCYKYLGRFEEAVKYFEKAVEYMEDSKSLLPYSNMADCYEALGDYRKAIECYEKDLKLFP 312

Query: 379 RSQNITKNEKLAIKQLRENNDIIIRPADKGGKTVVMDKADYTQKMTSILNSNDYEIIPGD 438
              +  K     I QL        +  +  G T  MD  DY  +M  +          G+
Sbjct: 313 EYMSFWKE----IGQLYAYLGEYEKAEEAYGHTTKMD--DYYSRMGDLW------FYQGN 360

Query: 439 PTKTIEESEKYGNLENESGQKHA--ASDFTKAFAD 471
             K +   +    +EN +  K A   SD  +A+ D
Sbjct: 361 EKKALRFYKT--GIENAAADKKAERQSDLGEAYMD 393


>gi|145479265|ref|XP_001425655.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
 gi|124392727|emb|CAK58257.1| unnamed protein product [Paramecium tetraurelia]
          Length = 1062

 Score = 63.2 bits (152), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 61/227 (26%), Positives = 106/227 (46%), Gaps = 19/227 (8%)

Query: 147 LHAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHV 206
           L   + F +A    D A + +P+ AD Y  +G      G+YEEAL N D  I  NP   V
Sbjct: 374 LDKMNRFKEALECYDLAIQKNPDDADLYNNKGDTLDRLGRYEEALENYDLAIQKNPEDSV 433

Query: 207 ARAQRHFVVHKMIVPGDRERVEQSLKEFRNFVDTH---------SNVVEACTLFAQVLVD 257
                 + ++K IV    +R +++LK +   +  +           ++    L A  L +
Sbjct: 434 ------YYLNKGIVLNMLDRHQEALKYYDLAIKINPEDPVFYNSKGIIYHHNLLANTLSE 487

Query: 258 QEDFDGAEEYFNRSIRVDPENASLYVHRAMLMLQARGNVDEAIKLIEKAISIDKSCMFAY 317
              F+ A +Y++ +I+ +PE +S Y ++A+ +  A+  V EA+K IE AI         Y
Sbjct: 488 MNRFEEAFQYYDLAIQKNPEESSFYNYKAIALQNAQKFV-EALKYIELAIQKSSEQSDYY 546

Query: 318 ETLGTIEVQRGRLEEAVKCFNKALPLARDEAELSHIYSLRDAAIAQM 364
                I  +  R+EE+++  + A+    +E   SH Y  +  A+ +M
Sbjct: 547 YNKAIILKEMDRIEESLEFSDLAISKNPEE---SHYYYTKALALNKM 590



 Score = 41.6 bits (96), Expect = 1.0,   Method: Compositional matrix adjust.
 Identities = 52/257 (20%), Positives = 105/257 (40%), Gaps = 16/257 (6%)

Query: 127 DTSVDPKIKVNAHIKRAVVHLHAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQ 186
           D  +   I+ + H     + L   + F +A    + A   +P+ ++ Y+ +        +
Sbjct: 218 DQGIQKNIEESDHYNNKAIALDKINRFAEALELYNLAISKNPHYSEYYFNKANTLDKMNR 277

Query: 187 YEEALRNLDKTIALNPNFHVARAQRHFVVHKMIVPGDRERVEQSLKEFRNFVDTHSNVVE 246
           + EAL N D  I  NP        +   + KM      ++ +Q+LK F   +  +    E
Sbjct: 278 FIEALENFDLAIQKNPEIPAYYNNKAMSLDKM------KKYKQALKWFDLAIKKNPEESE 331

Query: 247 ACTLFAQVLVDQEDFDGAEEYFNRSIRVDPENASLYVHRAMLMLQARGNVDEAIKLIEKA 306
                A  L        A +Y++ +I+ +P  +  Y ++AM  L       EA++  + A
Sbjct: 332 YYCNKAMTLDKLARHKEALKYYDLAIKKNPNESDYYNNKAM-TLDKMNRFKEALECYDLA 390

Query: 307 ISIDKSCMFAYETLGTIEVQRGRLEEAVKCFNKALPLARDEAELSHIYSLRDAAIAQM-- 364
           I  +      Y   G    + GR EEA++ ++ A+    +++    +Y L    +  M  
Sbjct: 391 IQKNPDDADLYNNKGDTLDRLGRYEEALENYDLAIQKNPEDS----VYYLNKGIVLNMLD 446

Query: 365 ---KVCERYNIKKKVSP 378
              +  + Y++  K++P
Sbjct: 447 RHQEALKYYDLAIKINP 463



 Score = 40.8 bits (94), Expect = 1.7,   Method: Compositional matrix adjust.
 Identities = 80/365 (21%), Positives = 157/365 (43%), Gaps = 44/365 (12%)

Query: 178  GQIYCLFGQYEEALRNLDKTIALNPNFHVARAQRHFVVHKMIVPGDRERVEQSLKEFRNF 237
             +I  L  +YEEAL+  D  I++NP        +  ++ K+       R  ++L EF + 
Sbjct: 688  AKILKLLKRYEEALKYFDLAISINPEDSENYDNKAMILIKL------NRFVEAL-EFSDL 740

Query: 238  -VDTHSNVVEACTLFAQVLVDQEDFDGAEEYFNRSIRVDPENASLYVHRAMLMLQARGNV 296
             ++    +       A +L     ++ A ++++ SI  +P  ++ Y ++AM  L      
Sbjct: 741  AIEKKPEISNYYNNKAIILNKINRYEEALKFYDLSIEKNPNESNYYNNKAM-TLNNMNRF 799

Query: 297  DEAIKLIEKAISIDKSCMFAYETLGTIEVQRGRLEEAVKCFNKALPLARDEAELSHIYSL 356
            +EA++  + AI  +      +E+ G    +  RL EA++ ++ A+    DE   S  Y+ 
Sbjct: 800  EEALQFYDLAIQKNPEISKYFESKGITLNKMNRLVEALEQYDLAIQKDPDE---SDYYNN 856

Query: 357  RDAAIAQMK----VCERYNIKKKVSPRSQNITKNE-KLAIKQLRENNDIIIRPADKGGKT 411
            +   + +M+      E+Y+I  + SP       N+ ++   QL+ +    I    +  K 
Sbjct: 857  KALTLNKMERFIEALEQYDIAIQKSPEEAEYYNNKGRIQYIQLQADTLSNINRQQEALKY 916

Query: 412  VVMD------KADYTQKMTSILNSNDYEI---------IPGDPTKTIEESEKYGNLENES 456
              +       ++DY  K   +LN  + ++         I  +P     E+ +Y   +   
Sbjct: 917  YDLAIQKNPAESDYYNKKAFMLNQMNRQLEALEYYNFAIQQNP-----ENPQYYKNKGII 971

Query: 457  GQKHAASDFTKAFADLDEA-EKVD------PNVADSYYQRGQIYCLFGQYEEALRNLDKT 509
             Q++  +D  +     +EA E +D      P V+  Y  +  I     ++EEAL+N +  
Sbjct: 972  EQRNVLADTLELLGRNEEALEYIDLAIQKSPEVSTFYNNKALILDKINEFEEALKNYNLA 1031

Query: 510  IALNP 514
            I LNP
Sbjct: 1032 IQLNP 1036



 Score = 40.0 bits (92), Expect = 3.3,   Method: Compositional matrix adjust.
 Identities = 48/219 (21%), Positives = 94/219 (42%), Gaps = 9/219 (4%)

Query: 132 PKIKVNAHIKRAVVHLHAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEAL 191
           PK  VN  IK  +  L   + F +A    D+  + +   +D Y  +        ++ EAL
Sbjct: 191 PKESVNEKIKSKI--LVKMNSFQEAQKQFDQGIQKNIEESDHYNNKAIALDKINRFAEAL 248

Query: 192 RNLDKTIALNPNFHVARAQRHFVVHKMIVPGDRERVEQSLKEFRNFVDTHSNVVEACTLF 251
              +  I+ NP++      +   + KM       R  ++L+ F   +  +  +       
Sbjct: 249 ELYNLAISKNPHYSEYYFNKANTLDKM------NRFIEALENFDLAIQKNPEIPAYYNNK 302

Query: 252 AQVLVDQEDFDGAEEYFNRSIRVDPENASLYVHRAMLMLQARGNVDEAIKLIEKAISIDK 311
           A  L   + +  A ++F+ +I+ +PE +  Y ++AM  L       EA+K  + AI  + 
Sbjct: 303 AMSLDKMKKYKQALKWFDLAIKKNPEESEYYCNKAM-TLDKLARHKEALKYYDLAIKKNP 361

Query: 312 SCMFAYETLGTIEVQRGRLEEAVKCFNKALPLARDEAEL 350
           +    Y        +  R +EA++C++ A+    D+A+L
Sbjct: 362 NESDYYNNKAMTLDKMNRFKEALECYDLAIQKNPDDADL 400



 Score = 39.3 bits (90), Expect = 5.4,   Method: Compositional matrix adjust.
 Identities = 52/256 (20%), Positives = 107/256 (41%), Gaps = 14/256 (5%)

Query: 127  DTSVDPKIKVNAHIKRAVVHLHAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQ 186
            D ++    +++ + +   + L+  +   +A    D A + DP+ +D Y  +        +
Sbjct: 807  DLAIQKNPEISKYFESKGITLNKMNRLVEALEQYDLAIQKDPDESDYYNNKALTLNKMER 866

Query: 187  YEEALRNLDKTIALNPN---FHVARAQRHFVVHKMIVPGDRERVEQSLKEFRNFVDTHSN 243
            + EAL   D  I  +P    ++  + +  ++  +     +  R +++LK +   +  +  
Sbjct: 867  FIEALEQYDIAIQKSPEEAEYYNNKGRIQYIQLQADTLSNINRQQEALKYYDLAIQKNPA 926

Query: 244  VVEACTLFAQVLVDQEDFDGAEEYFNRSIRVDPENASLYVHRAML--------MLQARGN 295
              +     A +L        A EY+N +I+ +PEN   Y ++ ++         L+  G 
Sbjct: 927  ESDYYNKKAFMLNQMNRQLEALEYYNFAIQQNPENPQYYKNKGIIEQRNVLADTLELLGR 986

Query: 296  VDEAIKLIEKAISIDKSCMFAYETLGTIEVQRGRLEEAVKCFNKALPLARDEAELSHIYS 355
             +EA++ I+ AI         Y     I  +    EEA+K +N A+ L     E S  Y+
Sbjct: 987  NEEALEYIDLAIQKSPEVSTFYNNKALILDKINEFEEALKNYNLAIQL---NPEDSDYYN 1043

Query: 356  LRDAAIAQMKVCERYN 371
             +  A+  M+   R N
Sbjct: 1044 NKAIALYNMRRFARSN 1059


>gi|262384168|ref|ZP_06077304.1| TPR repeat-containing protein [Bacteroides sp. 2_1_33B]
 gi|262295066|gb|EEY82998.1| TPR repeat-containing protein [Bacteroides sp. 2_1_33B]
          Length = 321

 Score = 63.2 bits (152), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 50/189 (26%), Positives = 90/189 (47%), Gaps = 17/189 (8%)

Query: 101 RLLRATVYIFTSQSTKAIEDLTQLVEDTSVDPKIKVNAHIKRAVVHLHAASDFTKAFADL 160
           RL R  +     +  + I D   ++E   ++P   V A+   A     A +D   A ADL
Sbjct: 99  RLTRVNLLFMLDKDAEVITDCLHVIE---LEPSNHV-AYFMMAKAK-KATNDVFGAIADL 153

Query: 161 DEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNP---NFHVARAQRHFVVHK 217
             +  +  + AD+Y  R +I    GQ +EAL +++K I + P   + ++ R + H  +  
Sbjct: 154 TRSISLKEDFADAYLLRAEILLGLGQAKEALPDVEKAIEIVPEEESSYLLRGRIHMAL-- 211

Query: 218 MIVPGDRERVEQSLKEFRNFVDTHSNVVEACTLFAQVLVDQEDFDGAEEYFNRSIRVDPE 277
               GD   +E +  +F+  +D +    +AC L  Q+L++Q+ +D A  +F+ +I  +P 
Sbjct: 212 ----GD---IEAANSDFQQVLDLNPFNEDACILSGQLLIEQKKYDEAIAFFDEAIETNPS 264

Query: 278 NASLYVHRA 286
            A  Y  R 
Sbjct: 265 FAKAYSERG 273


>gi|371777955|ref|ZP_09484277.1| hypothetical protein AnHS1_11097 [Anaerophaga sp. HS1]
          Length = 707

 Score = 63.2 bits (152), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 58/284 (20%), Positives = 123/284 (43%), Gaps = 23/284 (8%)

Query: 68  AKRAFEHEDYLTAIRHCTEEIESTSSNHTKALARLLRATVYIFTSQSTKAIEDLTQLVED 127
            + A   EDY+ AI++  + I+          A+   A  Y + +     +ED    + D
Sbjct: 32  GRNALYFEDYILAIQYFNQIIK----------AKPFLAEPYFYRALGKYYLEDFNGALND 81

Query: 128 TS----VDPKIKVNAHIKRAVVHLHAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCL 183
            +     +P + V+A+  R +++    +    +  D  +  KVDP   +     G  Y  
Sbjct: 82  CNEALKRNPYL-VDAYNLRGILY-QKLNKPEASVTDFKQGLKVDPLNVNLLINLGIAYIQ 139

Query: 184 FGQYEEALRNLDKTIALNPNFHVARAQRHFVVHKMIVPGDRERVEQSLKEFRNFVDTHSN 243
             QY++A+      + L+PN   A   R             +    +L++F   +D +  
Sbjct: 140 TEQYDKAIETYSDVLKLSPNLIRAYLNRGLAKFSA------QDTSGALEDFSKAIDVNPY 193

Query: 244 VVEACTLFAQVLVDQEDFDGAEEYFNRSIRVDPENASLYVHRAMLMLQARGNVDEAIKLI 303
           + +     + +   + DF+GA    N +I++ P+ +S Y++RA++  Q   ++  A+   
Sbjct: 194 IPDGYVNRSMIQYYKSDFEGALSDINEAIKLRPDESSFYMNRAIIRYQL-DDLRGAMADF 252

Query: 304 EKAISIDKSCMFAYETLGTIEVQRGRLEEAVKCFNKALPLARDE 347
           +K ++++      Y   G +  + G L+ A++ F++ L L  D+
Sbjct: 253 DKFVAMEPRNALGYNNRGILRAEIGDLDGAIEDFSRVLALREDD 296



 Score = 58.9 bits (141), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 109/470 (23%), Positives = 186/470 (39%), Gaps = 71/470 (15%)

Query: 105 ATVYIFTSQSTKAIEDLTQLVEDTSVDPKIKVNAHIKRAVVHLHAASDFTKAFADLDEAE 164
              YI T Q  KAIE  + +++   + P + + A++ R +    +A D + A  D  +A 
Sbjct: 134 GIAYIQTEQYDKAIETYSDVLK---LSPNL-IRAYLNRGLAKF-SAQDTSGALEDFSKAI 188

Query: 165 KVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQRHFVVHKMIVPGDR 224
            V+P + D Y  R  I      +E AL ++++ I L P+      +  F +++ I+    
Sbjct: 189 DVNPYIPDGYVNRSMIQYYKSDFEGALSDINEAIKLRPD------ESSFYMNRAIIRYQL 242

Query: 225 ERVEQSLKEFRNFVDTHSNVVEACTLFAQVLVDQEDFDGAEEYFNRSIRVDPENASLYVH 284
           + +  ++ +F  FV               +  +  D DGA E F+R + +  ++     +
Sbjct: 243 DDLRGAMADFDKFVAMEPRNALGYNNRGILRAEIGDLDGAIEDFSRVLALREDDLPTLYY 302

Query: 285 RAMLMLQARGNVDEAIKLIEKAISIDKSCMFAYETLGTIEVQR--GRLEEAVKCFNKALP 342
           RAML  + +G  ++A  L +  I  D    FA       EV++  G+ E A   +N A+ 
Sbjct: 303 RAMLY-KEKGEFEKA--LSDFNIVADAYPDFAPVYYNRAEVKQALGQFESAQLDYNTAMK 359

Query: 343 LARDEA-ELSHIYSLRDAAIAQMKVCERYNIKKKVSPRSQ---NITKNEKLA-------- 390
           L  D   E+    +   AA  Q    ++  I K+ + + +   NI    K+A        
Sbjct: 360 LEMDRRNEIDQNAADALAANDQNNSGQKSKIPKRKATKKEGDRNIRNYNKIAVLDDFGTD 419

Query: 391 -IKQLRENN------------------DIIIRPADKGGKTVVMDKADYTQKMTSILNSND 431
            ++QL  N                    I   P D     V   K +  +   S L S+ 
Sbjct: 420 QVEQLTPNTLRGKIQNRNIAIDLQRPYGITFFPGDTLVHRVRYFKKEVEELSNSFLFSHP 479

Query: 432 YEIIPGDPTKTIEESEKYGNLENESGQKHAASDFTKAFADLDE----AEKVDPNVADSYY 487
            EI       TIE              +  +++  K  ADLD+       +D  +     
Sbjct: 480 LEI----SNATIEPD------------RDTSAEIFKTIADLDKKIDSVSSIDEKII-YLM 522

Query: 488 QRGQIYCLFGQYEEALRNLDKTIALNPNF---HVARAQRHFVWTSTLAEL 534
           +RG +Y        A+ N ++ I L PN+   + ARA   F    TL EL
Sbjct: 523 ERGLLYLDVLNLNNAIDNFNQVIELRPNYFLGYFARAFTRFRMEETLKEL 572


>gi|196017383|ref|XP_002118506.1| hypothetical protein TRIADDRAFT_62542 [Trichoplax adhaerens]
 gi|190578834|gb|EDV19007.1| hypothetical protein TRIADDRAFT_62542 [Trichoplax adhaerens]
          Length = 1485

 Score = 63.2 bits (152), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 81/375 (21%), Positives = 159/375 (42%), Gaps = 36/375 (9%)

Query: 168 PNVADSYYQRGQIYCLFGQYEEALRNLDKTIALN----PNFHVARAQRHFVV-----HKM 218
           P++A +Y   GQ+Y   G+Y++AL   +K++ +      + H + A  +  +     H+ 
Sbjct: 183 PSIAVTYTNIGQVYKDQGKYDDALSMCNKSLKIQLTQLGDNHPSIATTYHSIGGVYYHQG 242

Query: 219 IVPGDRERVEQSLK-EFRNFVDTHSNVVEACTLFAQVLVDQEDFDGAEEYFNRSIRVD-- 275
                     +SLK +     D H +V    T   QV  DQ  +D A   +N+S+++   
Sbjct: 243 KYDDALSMYNKSLKIDLTQLGDNHPSVAVTYTNIGQVYNDQGKYDDALSMYNKSLKIKLT 302

Query: 276 ------PENASLYVHRAMLMLQARGNVDEAIKLIEKAISID--------KSCMFAYETLG 321
                 P  A+ Y H    + + +G  D+A+ +  K++ ID         S    Y ++G
Sbjct: 303 QLGDNHPSIATTY-HNIGGVYKVQGKYDDAVSIYNKSLKIDLTQLGDNHPSIATTYHSIG 361

Query: 322 TIEVQRGRLEEAVKCFNKALPLARDEAELSHIYSLRDAAIAQMKVCERYNIKKKVSPRSQ 381
            +   +G+  +A+  +NK+L +   +   +H       A+    +   Y  + K      
Sbjct: 362 GVYYHQGKYGDALSMYNKSLKIKLTQLGDNH----PSIAVTYTNIGLAYKDQGKYDDALS 417

Query: 382 NITKNEKLAIKQLRENNDIIIRPADKGGKTVVMDKADYTQKMTSILNSNDYEIIP-GDPT 440
              K+ K+ + QL +N+  I       G+ V  D+  Y   ++    S   ++   GD  
Sbjct: 418 MYNKSLKIHLTQLGDNHPSIAVTYTNIGQ-VYNDQGKYDDALSMYNKSLKIKLTQLGDNH 476

Query: 441 KTIEES-EKYGNLENESGQ-KHAASDFTKAFA-DLDEAEKVDPNVADSYYQRGQIYCLFG 497
            +I  +    G +    G+   A S + K+    L +     P+ A +Y+  G +Y   G
Sbjct: 477 PSIATTYHSIGGVYYHQGKYDDALSMYNKSLKIKLTQLGDNHPSNATTYHSIGDVYYHQG 536

Query: 498 QYEEALRNLDKTIAL 512
           +Y++AL   +K++ +
Sbjct: 537 KYDDALSMYNKSLKI 551



 Score = 56.6 bits (135), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 80/375 (21%), Positives = 161/375 (42%), Gaps = 38/375 (10%)

Query: 168  PNVADSYYQRGQIYCLFGQYEEALRNLDKTIAL--------NPNFHVARAQRHFVVHKMI 219
            P++A +Y   G +Y    +Y++AL   +K++ +        +P+  V       V     
Sbjct: 939  PSIATTYCNIGGVYYYQSKYDDALSMYNKSLKIKLTQLGDNHPSIAVTYTNIGLVYKNQG 998

Query: 220  VPGDR-ERVEQSLK-EFRNFVDTHSNVVEACTLFAQVLVDQEDFDGAEEYFNRSIRVD-- 275
               D      +SLK +     D + ++    T    V  DQ  +D A   +N+S++++  
Sbjct: 999  KYDDALSMYNKSLKIQLTQLGDNYPSIAATYTNIGLVYNDQGKYDDALSMYNKSLKINLT 1058

Query: 276  ------PENASLYVHRAMLMLQARGNVDEAIKLIEKAISID--------KSCMFAYETLG 321
                  P  A+ Y +   +  + +G  D+A+ +  K++ I          S    Y  +G
Sbjct: 1059 QLGDNHPSIATTYCNIGSVY-KDQGKYDDALSMYNKSLKIQLTQLGDNHPSIATTYHNIG 1117

Query: 322  TIEVQRGRLEEAVKCFNKALPLARDEAELSHIYSLRDAAIAQMKVCERYNIKKKVSPRSQ 381
            ++   +G+ ++A+  +NK+L +  D  +L   +S  + A     +   Y  + K      
Sbjct: 1118 SVYEDQGKYDDALSIYNKSLKI--DLTQLGDNHS--NIATTYHNIGSVYEDQGKYDDALS 1173

Query: 382  NITKNEKLAIKQLRENNDIIIRPADKGGKTVVMDKADYTQKMTSILNSNDYEIIP-GDPT 440
               K+ K+ + QL +N+  I       G+ V  D+  Y   ++    S    +   GD  
Sbjct: 1174 MYNKSLKIKLTQLGDNHPSIAATYRNIGQ-VYNDQGKYDDALSMYNKSLKIHLTQLGDNH 1232

Query: 441  KTIEESEKYGNLENESGQKH--AASDFTKAFA-DLDEAEKVDPNVADSYYQRGQIYCLFG 497
             +I  +  Y N+ +    K+  A S + K+   DL + +   P++A +Y   GQ+Y   G
Sbjct: 1233 PSIATT--YHNIGSVYQGKYDDALSMYNKSMKIDLTQLDDNHPSIAVTYTNIGQVYKDQG 1290

Query: 498  QYEEALRNLDKTIAL 512
            +Y++AL   +K++ +
Sbjct: 1291 KYDDALSMYNKSLKI 1305



 Score = 56.2 bits (134), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 79/380 (20%), Positives = 161/380 (42%), Gaps = 48/380 (12%)

Query: 168  PNVADSYYQRGQIYCLFGQYEEALRNLDKTIALN----PNFHVARAQRHFVVHKMIVPGD 223
            P++A +Y   G +Y   G+Y++AL   +K++ +N     + H + A  +  +    V  D
Sbjct: 1023 PSIAATYTNIGLVYNDQGKYDDALSMYNKSLKINLTQLGDNHPSIATTYCNIGS--VYKD 1080

Query: 224  RERVEQSLK--------EFRNFVDTHSNVVEACTLFAQVLVDQEDFDGAEEYFNRSIRVD 275
            + + + +L         +     D H ++         V  DQ  +D A   +N+S+++D
Sbjct: 1081 QGKYDDALSMYNKSLKIQLTQLGDNHPSIATTYHNIGSVYEDQGKYDDALSIYNKSLKID 1140

Query: 276  -------PENASLYVHRAMLMLQARGNVDEAIKLIEKAISID--------KSCMFAYETL 320
                     N +   H    + + +G  D+A+ +  K++ I          S    Y  +
Sbjct: 1141 LTQLGDNHSNIATTYHNIGSVYEDQGKYDDALSMYNKSLKIKLTQLGDNHPSIAATYRNI 1200

Query: 321  GTIEVQRGRLEEAVKCFNKALPLARDEAELSHIYSLRD----AAIAQMKVCERYNIKKKV 376
            G +   +G+ ++A+  +NK+L +        H+  L D     A     +   Y  K   
Sbjct: 1201 GQVYNDQGKYDDALSMYNKSLKI--------HLTQLGDNHPSIATTYHNIGSVYQGKYDD 1252

Query: 377  SPRSQNITKNEKLAIKQLRENNDIIIRPADKGGKTVVMDKADYTQKMTSILNSNDYEIIP 436
            +    N  K+ K+ + QL +N+  I       G+ V  D+  Y   ++    S   ++  
Sbjct: 1253 ALSMYN--KSMKIDLTQLDDNHPSIAVTYTNIGQ-VYKDQGKYDDALSMYNKSLKIQLTQ 1309

Query: 437  -GDPTKTIEES-EKYGNLENESGQ-KHAASDFTKAFA-DLDEAEKVDPNVADSYYQRGQI 492
             GD   +I  +    G++  + G+   A S + K+    L +     P++A +Y+  G +
Sbjct: 1310 LGDNHPSIATTYHNIGSVYKDQGKYDDALSMYNKSLKIQLTQLGDNHPSIATTYHNIGSV 1369

Query: 493  YCLFGQYEEALRNLDKTIAL 512
            Y   G+Y++AL  L+K++ +
Sbjct: 1370 YKDQGKYDDALSMLNKSLQI 1389



 Score = 55.5 bits (132), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 78/387 (20%), Positives = 159/387 (41%), Gaps = 60/387 (15%)

Query: 168 PNVADSYYQRGQIYCLFGQYEEALRNLDKTIALN----PNFHVARAQRHFVVHKMIVPGD 223
           P+ A +Y+  G +Y   G+Y++AL   +K++ +      + H + A  +  +    V  D
Sbjct: 561 PSNATTYHSIGGVYEDQGKYDDALSMYNKSLKIKLTQLGDNHPSIAMTYHNIGS--VYKD 618

Query: 224 RERVEQSLKEFR--------NFVDTHSNVVEACTLFAQVLVDQEDFDGAEEYFNRSIRVD 275
           + + + +L  +            D H ++         V  DQ  +D A   +N+S+++ 
Sbjct: 619 QGKYDDALSMYNKSLKIKLTQLGDNHPSIATTYHYIGSVYEDQGKYDDALSMYNKSLKIK 678

Query: 276 --------PENASLYVHRAMLMLQARGNVDEAIKLIEKAISID--------KSCMFAYET 319
                   P  A+ Y H    +   +G  D+A+ +  K++ I          S    Y  
Sbjct: 679 LTQLGDNHPSIATTY-HNIGNVYNDQGKYDDALSMYNKSLKIKLTQLGDNHPSIAMTYHN 737

Query: 320 LGTIEVQRGRLEEAVKCFNKALPLARDEAELSHIYSLRD----AAIAQMKVCERYNIKKK 375
           +G++   +G+ ++A+  +NK+L +        H+  L D     A     +   Y  + K
Sbjct: 738 IGSVYEDQGKYDDALSIYNKSLKI--------HLTQLGDNHPSIATTYHNIGSVYEDQGK 789

Query: 376 VSPRSQNITKNEKLAIKQLRENN-DIIIRPADKGGKTVVMDKADYTQKMTSILNSNDYEI 434
                    K+ K+ + QL +N+  I     + GG  V  D+  Y   ++    S   ++
Sbjct: 790 YDDALSMYNKSLKIQLTQLGDNHPSIAATYHNIGG--VYKDQGKYDDALSMYNKSLKIQL 847

Query: 435 IP-GDPTKTIEESEKYGNLENESGQKHAASDFTKAFADLDEAEKV--------DPNVADS 485
              GD   +I  +       N  G  +  S F  A +  +++ K+         P++A +
Sbjct: 848 TQLGDNHPSIATT-----YHNIGGVYYYQSKFDDALSMYNKSLKIHLTQLGDNHPSIAMT 902

Query: 486 YYQRGQIYCLFGQYEEALRNLDKTIAL 512
           Y+  G +Y   G+Y++AL   +K++ +
Sbjct: 903 YHNIGSVYKDQGKYDDALSMYNKSLKI 929



 Score = 54.7 bits (130), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 49/227 (21%), Positives = 99/227 (43%), Gaps = 28/227 (12%)

Query: 168  PNVADSYYQRGQIYCLFGQYEEALRNLDKTIA-----LNPNFHVARAQRHFV--VHKMIV 220
            P++A +Y   GQ+Y   G+Y++AL   +K++      L  N        H +  V++   
Sbjct: 1191 PSIAATYRNIGQVYNDQGKYDDALSMYNKSLKIHLTQLGDNHPSIATTYHNIGSVYQGKY 1250

Query: 221  PGDRERVEQSLK-EFRNFVDTHSNVVEACTLFAQVLVDQEDFDGAEEYFNRSIRVD---- 275
                    +S+K +     D H ++    T   QV  DQ  +D A   +N+S+++     
Sbjct: 1251 DDALSMYNKSMKIDLTQLDDNHPSIAVTYTNIGQVYKDQGKYDDALSMYNKSLKIQLTQL 1310

Query: 276  ----PENASLYVHRAMLMLQARGNVDEAIKLIEKAISID--------KSCMFAYETLGTI 323
                P  A+ Y H    + + +G  D+A+ +  K++ I          S    Y  +G++
Sbjct: 1311 GDNHPSIATTY-HNIGSVYKDQGKYDDALSMYNKSLKIQLTQLGDNHPSIATTYHNIGSV 1369

Query: 324  EVQRGRLEEAVKCFNKALPLARDEAELSHIYS---LRDAAIAQMKVC 367
               +G+ ++A+   NK+L ++      +H+++    R  A+   K+ 
Sbjct: 1370 YKDQGKYDDALSMLNKSLQISLVTLGENHLHTAQLYRSQAVVNYKLS 1416



 Score = 54.3 bits (129), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 103/491 (20%), Positives = 190/491 (38%), Gaps = 89/491 (18%)

Query: 67  KAKRAFEHEDYLTAIRHCTE---EIESTSSNHTKALARLLRATVYI-----FTSQ----- 113
           K  + FE  +Y  A+ H  E   +I+S S N        L   +Y+     + SQ     
Sbjct: 21  KGAKCFEEGNYEQALLHYKEAATQIQSMSKNSNNNYDHQLECDIYLDIADCYLSQYKLIE 80

Query: 114 STKAIEDLTQLVEDTSVDPKIKV--------NAHIKRAVVHLHAA-SDFTKAFADLDE-A 163
           + K   +  +L E     P+ +V           IK+    L+ A  DF K+     E +
Sbjct: 81  ADKWRRNAKKLAEQ----PQDRVRIAKCFDRQGCIKQLQGDLNGALEDFNKSLRIKSEWS 136

Query: 164 EKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQRHFVVHKMIVPGD 223
           E  D N+++SY     IY   G+Y +AL   +K++ +                       
Sbjct: 137 ESEDINISESYRNIASIYGNQGKYNDALSMYNKSLKI----------------------- 173

Query: 224 RERVEQSLKEFRNFVDTHSNVVEACTLFAQVLVDQEDFDGAEEYFNRSIRVD-------- 275
                    +     D H ++    T   QV  DQ  +D A    N+S+++         
Sbjct: 174 ---------KLTQLGDNHPSIAVTYTNIGQVYKDQGKYDDALSMCNKSLKIQLTQLGDNH 224

Query: 276 PENASLYVHRAMLMLQARGNVDEAIKLIEKAISID--------KSCMFAYETLGTIEVQR 327
           P  A+ Y H    +   +G  D+A+ +  K++ ID         S    Y  +G +   +
Sbjct: 225 PSIATTY-HSIGGVYYHQGKYDDALSMYNKSLKIDLTQLGDNHPSVAVTYTNIGQVYNDQ 283

Query: 328 GRLEEAVKCFNKALPLARDEAELSHIYSLRDAAIAQMKVCERYNIKKKVSPRSQNITKNE 387
           G+ ++A+  +NK+L +   +   +H       A     +   Y ++ K         K+ 
Sbjct: 284 GKYDDALSMYNKSLKIKLTQLGDNH----PSIATTYHNIGGVYKVQGKYDDAVSIYNKSL 339

Query: 388 KLAIKQLRENNDIIIRPADKGGKTVVMDKADYTQKMTSILNSNDYEIIP-GDPTKTIEES 446
           K+ + QL +N+  I       G  V   +  Y   ++    S   ++   GD   +I  +
Sbjct: 340 KIDLTQLGDNHPSIATTYHSIG-GVYYHQGKYGDALSMYNKSLKIKLTQLGDNHPSIAVT 398

Query: 447 EKYGNL----ENESGQKHAASDFTKAFA-DLDEAEKVDPNVADSYYQRGQIYCLFGQYEE 501
             Y N+    +++     A S + K+    L +     P++A +Y   GQ+Y   G+Y++
Sbjct: 399 --YTNIGLAYKDQGKYDDALSMYNKSLKIHLTQLGDNHPSIAVTYTNIGQVYNDQGKYDD 456

Query: 502 ALRNLDKTIAL 512
           AL   +K++ +
Sbjct: 457 ALSMYNKSLKI 467



 Score = 52.4 bits (124), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 75/382 (19%), Positives = 159/382 (41%), Gaps = 50/382 (13%)

Query: 168  PNVADSYYQRGQIYCLFGQYEEALRNLDKTIALN----PNFHVARAQRHFVVHKMIVPGD 223
            P++A +Y+  G +Y   G+Y++AL   +K++ +      + H + A  +  +    V  D
Sbjct: 645  PSIATTYHYIGSVYEDQGKYDDALSMYNKSLKIKLTQLGDNHPSIATTYHNIGN--VYND 702

Query: 224  RERVEQSLKEFR--------NFVDTHSNVVEACTLFAQVLVDQEDFDGAEEYFNRSIRV- 274
            + + + +L  +            D H ++         V  DQ  +D A   +N+S+++ 
Sbjct: 703  QGKYDDALSMYNKSLKIKLTQLGDNHPSIAMTYHNIGSVYEDQGKYDDALSIYNKSLKIH 762

Query: 275  -------DPENASLYVHRAMLMLQARGNVDEAIKLIEKAISID--------KSCMFAYET 319
                    P  A+ Y H    + + +G  D+A+ +  K++ I          S    Y  
Sbjct: 763  LTQLGDNHPSIATTY-HNIGSVYEDQGKYDDALSMYNKSLKIQLTQLGDNHPSIAATYHN 821

Query: 320  LGTIEVQRGRLEEAVKCFNKALPLARDEAELSHIYSLRDAAIAQMKVCERYNIKKKVSPR 379
            +G +   +G+ ++A+  +NK+L +   +   +H       A     +   Y  + K    
Sbjct: 822  IGGVYKDQGKYDDALSMYNKSLKIQLTQLGDNH----PSIATTYHNIGGVYYYQSKFDDA 877

Query: 380  SQNITKNEKLAIKQLRENNDIIIRPADKGGKTVVMDKADYTQKMTSILNSNDYEIIP-GD 438
                 K+ K+ + QL +N+  I       G +V  D+  Y   ++    S   ++   GD
Sbjct: 878  LSMYNKSLKIHLTQLGDNHPSIAMTYHNIG-SVYKDQGKYDDALSMYNKSLKIQLTQLGD 936

Query: 439  PTKTIEESEKYGNLENESGQKHAASDFTKAFADLDEAEKVD--------PNVADSYYQRG 490
               +I  +  Y N+    G  +  S +  A +  +++ K+         P++A +Y   G
Sbjct: 937  NHPSIATT--YCNI---GGVYYYQSKYDDALSMYNKSLKIKLTQLGDNHPSIAVTYTNIG 991

Query: 491  QIYCLFGQYEEALRNLDKTIAL 512
             +Y   G+Y++AL   +K++ +
Sbjct: 992  LVYKNQGKYDDALSMYNKSLKI 1013



 Score = 50.8 bits (120), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 79/389 (20%), Positives = 158/389 (40%), Gaps = 62/389 (15%)

Query: 168  PNVADSYYQRGQIYCLFGQYEEALRNLDKTIALN----PNFHVARAQRHFVVHKMIVPGD 223
            P++A +Y+  G +Y   G+Y++AL   +K++ +      + H + A  +  +    V  D
Sbjct: 687  PSIATTYHNIGNVYNDQGKYDDALSMYNKSLKIKLTQLGDNHPSIAMTYHNIGS--VYED 744

Query: 224  RERVEQSLKEFR--------NFVDTHSNVVEACTLFAQVLVDQEDFDGAEEYFNRSIRVD 275
            + + + +L  +            D H ++         V  DQ  +D A   +N+S+++ 
Sbjct: 745  QGKYDDALSIYNKSLKIHLTQLGDNHPSIATTYHNIGSVYEDQGKYDDALSMYNKSLKIQ 804

Query: 276  --------PENASLYVHRAMLMLQARGNVDEAIKLIEKAISID--------KSCMFAYET 319
                    P  A+ Y H    + + +G  D+A+ +  K++ I          S    Y  
Sbjct: 805  LTQLGDNHPSIAATY-HNIGGVYKDQGKYDDALSMYNKSLKIQLTQLGDNHPSIATTYHN 863

Query: 320  LGTIEVQRGRLEEAVKCFNKALPLARDEAELSHIYSLRD----AAIAQMKVCERYNIKKK 375
            +G +   + + ++A+  +NK+L +        H+  L D     A+    +   Y  + K
Sbjct: 864  IGGVYYYQSKFDDALSMYNKSLKI--------HLTQLGDNHPSIAMTYHNIGSVYKDQGK 915

Query: 376  VSPRSQNITKNEKLAIKQLRENN-DIIIRPADKGGKTVVMDKAD-----YTQKMTSILNS 429
                     K+ K+ + QL +N+  I     + GG      K D     Y + +   L  
Sbjct: 916  YDDALSMYNKSLKIQLTQLGDNHPSIATTYCNIGGVYYYQSKYDDALSMYNKSLKIKLTQ 975

Query: 430  NDYEIIPGDPTKTIEESEKYGNL----ENESGQKHAASDFTKAFA-DLDEAEKVDPNVAD 484
                   GD   +I  +  Y N+    +N+     A S + K+    L +     P++A 
Sbjct: 976  ------LGDNHPSIAVT--YTNIGLVYKNQGKYDDALSMYNKSLKIQLTQLGDNYPSIAA 1027

Query: 485  SYYQRGQIYCLFGQYEEALRNLDKTIALN 513
            +Y   G +Y   G+Y++AL   +K++ +N
Sbjct: 1028 TYTNIGLVYNDQGKYDDALSMYNKSLKIN 1056



 Score = 48.1 bits (113), Expect = 0.010,   Method: Compositional matrix adjust.
 Identities = 88/432 (20%), Positives = 167/432 (38%), Gaps = 53/432 (12%)

Query: 121 LTQLVEDTSVDPKIKVNAHIKRAVVHLHAASD-----FTKAFA-DLDEAEKVDPNVADSY 174
           LTQL ++    P I    H    V +     D     + K+   DL +     P+VA +Y
Sbjct: 217 LTQLGDN---HPSIATTYHSIGGVYYHQGKYDDALSMYNKSLKIDLTQLGDNHPSVAVTY 273

Query: 175 YQRGQIYCLFGQYEEALRNLDKTIA-----LNPNFHVARAQRHFVVHKMIVPGDRERV-- 227
              GQ+Y   G+Y++AL   +K++      L  N        H +     V G  +    
Sbjct: 274 TNIGQVYNDQGKYDDALSMYNKSLKIKLTQLGDNHPSIATTYHNIGGVYKVQGKYDDAVS 333

Query: 228 --EQSLK-EFRNFVDTHSNVVEACTLFAQVLVDQEDFDGAEEYFNRSIRVD--------P 276
              +SLK +     D H ++         V   Q  +  A   +N+S+++         P
Sbjct: 334 IYNKSLKIDLTQLGDNHPSIATTYHSIGGVYYHQGKYGDALSMYNKSLKIKLTQLGDNHP 393

Query: 277 ENASLYVHRAMLMLQARGNVDEAIKLIEKAISI--------DKSCMFAYETLGTIEVQRG 328
             A  Y +   L  + +G  D+A+ +  K++ I          S    Y  +G +   +G
Sbjct: 394 SIAVTYTNIG-LAYKDQGKYDDALSMYNKSLKIHLTQLGDNHPSIAVTYTNIGQVYNDQG 452

Query: 329 RLEEAVKCFNKALPLARDEAELSHIYSLRDAAIAQMKVCERYNIKKKVSPRSQNITKNEK 388
           + ++A+  +NK+L +   +   +H       A     +   Y  + K         K+ K
Sbjct: 453 KYDDALSMYNKSLKIKLTQLGDNH----PSIATTYHSIGGVYYHQGKYDDALSMYNKSLK 508

Query: 389 LAIKQLRENNDIIIRPADKGGKTVVMD----KADYTQKMTSILNSNDYEIIP-GD--PTK 441
           + + QL +N      P++      + D    +  Y   ++    S   ++   GD  P+ 
Sbjct: 509 IKLTQLGDN-----HPSNATTYHSIGDVYYHQGKYDDALSMYNKSLKIKLTQLGDNHPSN 563

Query: 442 TIEESEKYGNLENESGQKHAASDFTKAFA-DLDEAEKVDPNVADSYYQRGQIYCLFGQYE 500
                   G  E++     A S + K+    L +     P++A +Y+  G +Y   G+Y+
Sbjct: 564 ATTYHSIGGVYEDQGKYDDALSMYNKSLKIKLTQLGDNHPSIAMTYHNIGSVYKDQGKYD 623

Query: 501 EALRNLDKTIAL 512
           +AL   +K++ +
Sbjct: 624 DALSMYNKSLKI 635



 Score = 47.0 bits (110), Expect = 0.026,   Method: Compositional matrix adjust.
 Identities = 44/212 (20%), Positives = 84/212 (39%), Gaps = 52/212 (24%)

Query: 149  AASDFTKAFA-DLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVA 207
            A S + K+   DL +      N+A +Y+  G +Y   G+Y++AL   +K++ +       
Sbjct: 1129 ALSIYNKSLKIDLTQLGDNHSNIATTYHNIGSVYEDQGKYDDALSMYNKSLKI------- 1181

Query: 208  RAQRHFVVHKMIVPGDRERVEQSLKEFRNFVDTHSNVVEACTLFAQVLVDQEDFDGAEEY 267
                                     +     D H ++        QV  DQ  +D A   
Sbjct: 1182 -------------------------KLTQLGDNHPSIAATYRNIGQVYNDQGKYDDALSM 1216

Query: 268  FNRSIRV--------DPENASLYVHRAMLMLQARGNVDEAIKLIEKAISID--------K 311
            +N+S+++         P  A+ Y H    + Q  G  D+A+ +  K++ ID         
Sbjct: 1217 YNKSLKIHLTQLGDNHPSIATTY-HNIGSVYQ--GKYDDALSMYNKSMKIDLTQLDDNHP 1273

Query: 312  SCMFAYETLGTIEVQRGRLEEAVKCFNKALPL 343
            S    Y  +G +   +G+ ++A+  +NK+L +
Sbjct: 1274 SIAVTYTNIGQVYKDQGKYDDALSMYNKSLKI 1305


>gi|440683182|ref|YP_007157977.1| Tetratricopeptide TPR_2 repeat-containing protein [Anabaena
           cylindrica PCC 7122]
 gi|428680301|gb|AFZ59067.1| Tetratricopeptide TPR_2 repeat-containing protein [Anabaena
           cylindrica PCC 7122]
          Length = 534

 Score = 62.8 bits (151), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 78/356 (21%), Positives = 146/356 (41%), Gaps = 35/356 (9%)

Query: 20  FKPSKQF-IKTYLKSFPNDPILQPDGLSNGVELTNGDTNESHELDLLSKAKRAFEHEDYL 78
           F P+K   +KT   SF  + +L   GL   +E +   TN SH+      +   F+     
Sbjct: 165 FLPTKMIKLKTGKISFGINQLLYGGGLLCYLEQSQNSTNNSHQQ---QSSINQFKTSKNE 221

Query: 79  TAIRHCTEEIESTSSNHTKALARLLRATVYIFTSQSTKAIEDLTQLVEDTSVDPKIKVNA 138
               H   E++   + ++  +   L    Y        AI +  Q ++D   D     N 
Sbjct: 222 LIKSHVYSELDKYPALNSTLIYEKL-GDKYFQKGDYAAAINNYNQALQDKHQDA----NI 276

Query: 139 HIKRAVVHLHAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTI 198
           + K  +V+ H   D+ KA  D  +A  ++ N + +Y +RG  +   G Y+ A+ + ++ I
Sbjct: 277 YYKLGLVY-HQLGDYKKAIIDYSQAINININYSQAYNKRGLAHYQLGNYQTAIEDYNQAI 335

Query: 199 ALNPNFHV-----ARAQRHFVVHKMIVPGDRERVE--------QSLKEF-RNFVDTHSNV 244
            +NP+  V     A A+ H   H+  +    + ++        Q  +E  R  +D    +
Sbjct: 336 RINPDVAVNYRNRAEARSHIGDHQGAIEDYNQAIKINPLDAITQKNREITRYLLDDQQKL 395

Query: 245 VEACTLF----------AQVLVDQEDFDGAEEYFNRSIRVDPENASLYVHRAMLMLQARG 294
           V    +               ++  +++GA E +N++I+++P  A  Y +R        G
Sbjct: 396 VPEIKIAPDDAVAYKNRGNTRLECGNYEGAIEDYNQAIQINPNYADAYYNRGNAH-SDLG 454

Query: 295 NVDEAIKLIEKAISIDKSCMFAYETLGTIEVQRGRLEEAVKCFNKALPLARDEAEL 350
           N + AI    K I +  +   AY   G + +  G  + A++ F +A  L     +L
Sbjct: 455 NYEAAIDDFSKVIKVKSNYTDAYYNRGNVRLIIGDKQGAIEDFQQAADLYWQHGKL 510



 Score = 53.9 bits (128), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 63/270 (23%), Positives = 114/270 (42%), Gaps = 50/270 (18%)

Query: 260 DFDGAEEYFNRSIRVDPENASLYVHRAMLMLQARGNVDEAIKLIEKAISIDKSCMFAYET 319
           D+  A   +N++++   ++A++Y ++  L+    G+  +AI    +AI+I+ +   AY  
Sbjct: 255 DYAAAINNYNQALQDKHQDANIY-YKLGLVYHQLGDYKKAIIDYSQAINININYSQAYNK 313

Query: 320 LGTIEVQRGRLEEAVKCFNKALPLARDEAELSHIYSLRDAAIAQMKV------CERYNIK 373
            G    Q G  + A++ +N+A+ +  D A      + R+ A A+  +       E YN  
Sbjct: 314 RGLAHYQLGNYQTAIEDYNQAIRINPDVA-----VNYRNRAEARSHIGDHQGAIEDYNQA 368

Query: 374 KKVSPRSQNITKNEKLAIKQLRENNDIIIRPADKGGKTVVMDKADYTQKMTSILNSNDYE 433
            K++P      KN ++    L                       D  QK+       + +
Sbjct: 369 IKINPLDAITQKNREITRYLL-----------------------DDQQKLVP-----EIK 400

Query: 434 IIPGDPTKTIEESEKYGNLENESGQKHAASDFTKAFADLDEAEKVDPNVADSYYQRGQIY 493
           I P D        +  GN   E G      ++  A  D ++A +++PN AD+YY RG  +
Sbjct: 401 IAPDDAVAY----KNRGNTRLECG------NYEGAIEDYNQAIQINPNYADAYYNRGNAH 450

Query: 494 CLFGQYEEALRNLDKTIALNPNFHVARAQR 523
              G YE A+ +  K I +  N+  A   R
Sbjct: 451 SDLGNYEAAIDDFSKVIKVKSNYTDAYYNR 480



 Score = 50.1 bits (118), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 35/138 (25%), Positives = 65/138 (47%), Gaps = 5/138 (3%)

Query: 118 IEDLTQLVEDTSVDPKIKVNAHIKRAVVHLHAASDFTKAFADLDEAEKVDPNVADSYYQR 177
           ++D  +LV +  + P   V A+  R    L    ++  A  D ++A +++PN AD+YY R
Sbjct: 389 LDDQQKLVPEIKIAPDDAV-AYKNRGNTRLECG-NYEGAIEDYNQAIQINPNYADAYYNR 446

Query: 178 GQIYCLFGQYEEALRNLDKTIALNPNFHVARAQRHFVVHKMIVPGDRERVEQSLKEFRNF 237
           G  +   G YE A+ +  K I +  N+  A   R  V    ++ GD++   +  ++  + 
Sbjct: 447 GNAHSDLGNYEAAIDDFSKVIKVKSNYTDAYYNRGNV---RLIIGDKQGAIEDFQQAADL 503

Query: 238 VDTHSNVVEACTLFAQVL 255
              H  + E     A++L
Sbjct: 504 YWQHGKLEEHKETQARIL 521


>gi|338210531|ref|YP_004654580.1| hypothetical protein [Runella slithyformis DSM 19594]
 gi|336304346|gb|AEI47448.1| Tetratricopeptide TPR_1 repeat-containing protein [Runella
           slithyformis DSM 19594]
          Length = 446

 Score = 62.8 bits (151), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 86/387 (22%), Positives = 155/387 (40%), Gaps = 62/387 (16%)

Query: 152 DFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQR 211
           D   A  D D + +++P  +D+Y  RG        Y  A+++  ++I LNP+      QR
Sbjct: 76  DNRGAILDFDRSIELNPKYSDAYLYRGVSKAKQDDYRSAIQDFSRSIELNPDDPQGYLQR 135

Query: 212 HFVVHKMIVPGDRERVEQ---SLKEFRNFVDTHSNVVEACTLFAQVLVDQEDFDGAEEYF 268
                      +R R+E    +L++    V+   N   A      V +  EDF  A   F
Sbjct: 136 GI---------NRARLENYRGALQDLNRTVELEPNNAGALYTRGNVKLKLEDFTSALADF 186

Query: 269 NRSIRVDPENASLYVHRAMLMLQARGNVDEAIKLIEKAISIDKSCMFAYETLGTIEVQRG 328
           +R I + P+++S Y  R     +   + + A+    KAI +      ++   G    +  
Sbjct: 187 SRVIDLTPKSSSAYAGRGFTRTKLN-DFNGAVADYSKAIELKADDSESFYNRGFARSKLE 245

Query: 329 RLEEAVKCFNKALPLARDEAELSHIYSLRDAAIAQMKVCERYNIKKKVSPRSQNITKNEK 388
           + EEA+  F++A+ L   + +    Y  R         C     K K+         +++
Sbjct: 246 KYEEAIADFDQAIIL---DPQNHRAYYGRG-------FC-----KSKLG--------SQR 282

Query: 389 LAIKQLRENNDIIIRPADKGGKTVVMDKADYTQKMT-SILNSNDYEIIPGDPTKTIEESE 447
            AI  L +  DI   P D         K  Y  ++T S+L+         D    ++E  
Sbjct: 283 EAISDLNKAVDINNTPTDT--------KVTYAGRITRSVLD---------DLRNVVQERN 325

Query: 448 KYGNLENESGQ--------KHAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQY 499
           K   L +E  +        K+   D   A  DL++A +++P  +++Y+ RG +    G  
Sbjct: 326 KIYELSSERSEALFARGVGKNKQGDAKGAIIDLNKAIELNPTYSEAYFTRGMVKSAIGDQ 385

Query: 500 EEALRNLDKTIALNPNFHVARAQRHFV 526
             A+++    + LNP +  A   R  +
Sbjct: 386 RGAVQDCSSAVKLNPKYAEAYYVRGLI 412



 Score = 59.3 bits (142), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 73/294 (24%), Positives = 125/294 (42%), Gaps = 41/294 (13%)

Query: 75  EDYLTAIRHCTEEIESTSSNHTKALARLLRATVYIFTSQSTKAIEDLTQLVEDTSVDPKI 134
           E+Y  A++     +E   +N   A A   R  V +     T A+ D +++++ T   PK 
Sbjct: 143 ENYRGALQDLNRTVELEPNN---AGALYTRGNVKLKLEDFTSALADFSRVIDLT---PK- 195

Query: 135 KVNAHIKRAVVHLHAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNL 194
             +A+  R        +DF  A AD  +A ++  + ++S+Y RG       +YEEA+ + 
Sbjct: 196 SSSAYAGRGFTRTKL-NDFNGAVADYSKAIELKADDSESFYNRGFARSKLEKYEEAIADF 254

Query: 195 DKTIALNPNFHVARAQRHFVVHKMI-----------------VPGDRE-----RVEQS-L 231
           D+ I L+P  H A   R F   K+                   P D +     R+ +S L
Sbjct: 255 DQAIILDPQNHRAYYGRGFCKSKLGSQREAISDLNKAVDINNTPTDTKVTYAGRITRSVL 314

Query: 232 KEFRNFVDTHSNVVEACT-----LFAQVLV--DQEDFDGAEEYFNRSIRVDPENASLYVH 284
            + RN V   + + E  +     LFA+ +    Q D  GA    N++I ++P  +  Y  
Sbjct: 315 DDLRNVVQERNKIYELSSERSEALFARGVGKNKQGDAKGAIIDLNKAIELNPTYSEAYFT 374

Query: 285 RAMLMLQARGNVDEAIKLIEKAISIDKSCMFAYETLGTIEVQRGRLEEAVKCFN 338
           R M+   A G+   A++    A+ ++     AY   G I+   G  +E   C +
Sbjct: 375 RGMVK-SAIGDQRGAVQDCSSAVKLNPKYAEAYYVRGLIKHSLG--DENSGCLD 425



 Score = 53.9 bits (128), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 68/281 (24%), Positives = 122/281 (43%), Gaps = 36/281 (12%)

Query: 260 DFDGAEEYFNRSIRVDPENASLYVHRAMLMLQARGNVDEAIKLIEKAISIDKSCMFAYET 319
           DF  A + FN +I + PENA  Y +RAM     + N   AI   +++I ++     AY  
Sbjct: 42  DFMAALQAFNLAITMSPENAPSYYNRAMAKANLKDNRG-AILDFDRSIELNPKYSDAYLY 100

Query: 320 LGTIEVQRGRLEEAVKCFNKALPLARDEAELSHIYSLRDAAIAQMKVCERYNIKKKVSPR 379
            G  + ++     A++ F++++ L  D+ +    Y  R    A+++              
Sbjct: 101 RGVSKAKQDDYRSAIQDFSRSIELNPDDPQ---GYLQRGINRARLE-------------- 143

Query: 380 SQNITKNEKLAIKQLRENNDIIIRPADKGGKTVVMDKADYTQKMTSILNSNDYEIIPGDP 439
                 N + A++ L  N  + + P + G        A YT+     L   D+     D 
Sbjct: 144 ------NYRGALQDL--NRTVELEPNNAG--------ALYTRGNVK-LKLEDFTSALADF 186

Query: 440 TKTIEESEKYGNLENESG-QKHAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQ 498
           ++ I+ + K  +     G  +   +DF  A AD  +A ++  + ++S+Y RG       +
Sbjct: 187 SRVIDLTPKSSSAYAGRGFTRTKLNDFNGAVADYSKAIELKADDSESFYNRGFARSKLEK 246

Query: 499 YEEALRNLDKTIALNPNFHVARAQRHFVWTSTLAELMAFSD 539
           YEEA+ + D+ I L+P  H A   R F  +   ++  A SD
Sbjct: 247 YEEAIADFDQAIILDPQNHRAYYGRGFCKSKLGSQREAISD 287


>gi|357604079|gb|EHJ64035.1| putative reverse transcriptase [Danaus plexippus]
          Length = 314

 Score = 62.8 bits (151), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 33/81 (40%), Positives = 50/81 (61%), Gaps = 2/81 (2%)

Query: 370 YNIKKKVSPRSQNITKNEKLAIKQLRENNDIIIRPADKGGKTVVMDKADYTQKMTSILNS 429
           Y +++   PR QNI++ E +A+KQLR N D+ +  ADKG  TV+MD +DY  K+  IL+ 
Sbjct: 231 YVLRRSKLPR-QNISRQESVALKQLRNNEDLTVLRADKGNATVIMDTSDYDNKIIEILSD 289

Query: 430 ND-YEIIPGDPTKTIEESEKY 449
           N  Y+ +  DPT  +    K+
Sbjct: 290 NSIYKKVNKDPTTKVLTETKF 310


>gi|414075408|ref|YP_006994726.1| TPR repeat domain-containing protein [Anabaena sp. 90]
 gi|413968824|gb|AFW92913.1| TPR repeat domain-containing protein [Anabaena sp. 90]
          Length = 755

 Score = 62.8 bits (151), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 55/222 (24%), Positives = 100/222 (45%), Gaps = 9/222 (4%)

Query: 147 LHAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHV 206
           L+      +A A   +A + D   A +YY  G +     + +EA+    K I LNP +  
Sbjct: 142 LYDQEKLKEAVAAYRKAIEFDHKYAAAYYNLGNVLYEQKELDEAVAAYRKAIELNPKYAT 201

Query: 207 ARAQRHFVVHKMIVPGDRERVEQSLKEFRNFVDTHSNVVEACTLFAQVLVDQEDFDGAEE 266
           A       +       D++++++++  ++  +  +     A       L DQ+  D A  
Sbjct: 202 AYNNLGNALS------DQKKLDEAVAAYQEAIKLNPKDATAYNNLGIALSDQKKLDEAVA 255

Query: 267 YFNRSIRVDPENASLYVHRAMLMLQARGNVDEAIKLIEKAISIDKSCMFAYETLGTIEVQ 326
            + ++I +DP+ A+ Y +     L  +  +DEA+   +KAI +D     AY  LG     
Sbjct: 256 AYQKAIELDPKYATAYYNLGN-ALSDQKKLDEAVAAYQKAIELDPKYATAYYNLGNALSD 314

Query: 327 RGRLEEAVKCFNKALPLARDEAELSHIYSLRDAAIAQMKVCE 368
           + +L+EAV  + KA+ L  D    +  Y+L +A   Q K+ E
Sbjct: 315 QKKLDEAVAAYQKAIEL--DPKYATAYYNLGNALRGQKKLDE 354



 Score = 62.0 bits (149), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 53/213 (24%), Positives = 101/213 (47%), Gaps = 9/213 (4%)

Query: 156 AFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQRHFVV 215
           A A   EA K++P  A +Y   G       + +EA+    K I L+P +  A    ++ +
Sbjct: 219 AVAAYQEAIKLNPKDATAYNNLGIALSDQKKLDEAVAAYQKAIELDPKYATA----YYNL 274

Query: 216 HKMIVPGDRERVEQSLKEFRNFVDTHSNVVEACTLFAQVLVDQEDFDGAEEYFNRSIRVD 275
              +   D++++++++  ++  ++       A       L DQ+  D A   + ++I +D
Sbjct: 275 GNAL--SDQKKLDEAVAAYQKAIELDPKYATAYYNLGNALSDQKKLDEAVAAYQKAIELD 332

Query: 276 PENASLYVHRAMLMLQARGNVDEAIKLIEKAISIDKSCMFAYETLGTIEVQRGRLEEAVK 335
           P+ A+ Y +     L+ +  +DEA+   +KAI ++     AY  LG     + +L+EAV 
Sbjct: 333 PKYATAYYNLGN-ALRGQKKLDEAVAAYQKAIELNPKYATAYNNLGIALSDQKKLDEAVA 391

Query: 336 CFNKALPLARDEAELSHIYSLRDAAIAQMKVCE 368
            + KA+ L   +A  +  Y+L  A   Q K+ E
Sbjct: 392 AYQKAIELNPKDA--TAYYNLGIALSDQKKLDE 422



 Score = 55.1 bits (131), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 44/179 (24%), Positives = 79/179 (44%), Gaps = 7/179 (3%)

Query: 165 KVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQRHFVVHKMIVPGDR 224
           +V+PN   +Y   G      G+  EAL    K + LNPN   A      V++    P   
Sbjct: 58  QVEPNNGKAYNNLGNALRRQGKLPEALTAHQKALQLNPNDAEAYVGIGNVLNAQGKP--- 114

Query: 225 ERVEQSLKEFRNFVDTHSNVVEACTLFAQVLVDQEDFDGAEEYFNRSIRVDPENASLYVH 284
              ++++  +R  ++      +A       L DQE    A   + ++I  D + A+ Y +
Sbjct: 115 ---DEAVAAYRKAIEFDPKYAKAYNSLGNALYDQEKLKEAVAAYRKAIEFDHKYAAAYYN 171

Query: 285 RAMLMLQARGNVDEAIKLIEKAISIDKSCMFAYETLGTIEVQRGRLEEAVKCFNKALPL 343
              ++ + +  +DEA+    KAI ++     AY  LG     + +L+EAV  + +A+ L
Sbjct: 172 LGNVLYEQK-ELDEAVAAYRKAIELNPKYATAYNNLGNALSDQKKLDEAVAAYQEAIKL 229



 Score = 46.2 bits (108), Expect = 0.049,   Method: Compositional matrix adjust.
 Identities = 73/306 (23%), Positives = 121/306 (39%), Gaps = 19/306 (6%)

Query: 222 GDRERVEQSLKEFRNFVDTHSNVVEACTLFAQVLVDQEDFDGAEEYFNRSIRVDPENASL 281
           GD  + E     +R  +    N  +A       L  Q     A     ++++++P +A  
Sbjct: 44  GDNSQAETI---WRKVLQVEPNNGKAYNNLGNALRRQGKLPEALTAHQKALQLNPNDAEA 100

Query: 282 YVHRAMLMLQARGNVDEAIKLIEKAISIDKSCMFAYETLGTIEVQRGRLEEAVKCFNKAL 341
           YV     +L A+G  DEA+    KAI  D     AY +LG     + +L+EAV  + KA+
Sbjct: 101 YVGIGN-VLNAQGKPDEAVAAYRKAIEFDPKYAKAYNSLGNALYDQEKLKEAVAAYRKAI 159

Query: 342 PLARDEAELSHIYSLRDAAIAQMKVCERYNIKKK---VSPRSQNITKNEKLAIKQLRENN 398
               D    +  Y+L +    Q ++ E     +K   ++P+      N   A+   ++  
Sbjct: 160 EF--DHKYAAAYYNLGNVLYEQKELDEAVAAYRKAIELNPKYATAYNNLGNALSD-QKKL 216

Query: 399 DIIIRPADKGGKTVVMDKADYTQKMTSILNSNDYEIIPGDPTKTIEESEKYG----NLEN 454
           D  +    +  K    D   Y     ++ +    +       K IE   KY     NL N
Sbjct: 217 DEAVAAYQEAIKLNPKDATAYNNLGIALSDQKKLDEAVAAYQKAIELDPKYATAYYNLGN 276

Query: 455 E-SGQKHAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALN 513
             S QK       +A A   +A ++DP  A +YY  G       + +EA+    K I L+
Sbjct: 277 ALSDQKK----LDEAVAAYQKAIELDPKYATAYYNLGNALSDQKKLDEAVAAYQKAIELD 332

Query: 514 PNFHVA 519
           P +  A
Sbjct: 333 PKYATA 338


>gi|330834799|ref|YP_004409527.1| hypothetical protein Mcup_0938 [Metallosphaera cuprina Ar-4]
 gi|329566938|gb|AEB95043.1| conserved hypothetical protein [Metallosphaera cuprina Ar-4]
          Length = 668

 Score = 62.8 bits (151), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 78/363 (21%), Positives = 155/363 (42%), Gaps = 60/363 (16%)

Query: 169 NVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQRHFVVHKMIVPGDRERVE 228
           N A+ YY++ +     G+++EAL+ +DK + L+P     + + HF+  K ++  D    E
Sbjct: 235 NSAEDYYKKSKELFDNGKHDEALKEIDKAMRLDP----YKPEYHFL--KGLILYDVHENE 288

Query: 229 QSLKEFRNFVDTHSNVVEACTLFAQVLVDQEDFDGAEEYFNRSIRVDPENASLYVHRAML 288
            +++ F   +  + N  E      + L + + ++ A E F+ +IR++ +    Y  +   
Sbjct: 289 DAIEAFYKAIRQNPNNPEYYYFKGKALYEVKKYEDALEAFDNAIRLNDKRPEYYFFKGEA 348

Query: 289 MLQARGNVD------EAIKLIEKAISIDKSCMFAYETLGTIEVQRGRLEEAVKCFNKALP 342
           + + +   D      +A++ +E+ I       F Y   G    +  R  +A++  N+A+ 
Sbjct: 349 LYELKRYNDAYKVLIKAVEKLEEEIKRKPDNPFYYWAKGEALYELKRYNDAIEVLNRAIS 408

Query: 343 LARDEAE--------LSHIYSLRDAAIAQMKVC---ERYNIKKKVSPRSQNITKNEKLAI 391
           L  D +E        L  I+ + D A+ ++      + +NIK      +   +K  +   
Sbjct: 409 LNPDNSEYRFLRGKALYEIFRI-DEALEELWTAIQLDHFNIKYLYFMVNALYSKGRR--- 464

Query: 392 KQLRENNDIIIRPADKGGKTVVMDKADYTQKMTSILNSNDYEIIPGDPTKTIEESEKYGN 451
           K+  ENN+ II+  D+  +                         P +P     + +   N
Sbjct: 465 KRTVENNEKIIKSYDEKIREN-----------------------PNNPEYYYAKGKVLSN 501

Query: 452 LENESGQKHAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIA 511
           L          + F +A  +L+ A K++PN  +  + +G +     +YEEAL  L+  I 
Sbjct: 502 L----------NRFEEALEELNNAIKLNPNNPEYRFGKGYLLYELYRYEEALEELNNAIK 551

Query: 512 LNP 514
           LNP
Sbjct: 552 LNP 554



 Score = 53.5 bits (127), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 40/165 (24%), Positives = 86/165 (52%), Gaps = 17/165 (10%)

Query: 155 KAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQRHFV 214
           K     DE  + +PN  + YY +G++     ++EEAL  L+  I LNPN    R  + ++
Sbjct: 473 KIIKSYDEKIRENPNNPEYYYAKGKVLSNLNRFEEALEELNNAIKLNPNNPEYRFGKGYL 532

Query: 215 VHKMIVPGDRERVEQSLKEFRNFV-----DTHSNVVEACTLFAQVLVDQEDFDGAEEYFN 269
           ++++       R E++L+E  N +     ++  +  +  T +    +D+ D D  +E FN
Sbjct: 533 LYELY------RYEEALEELNNAIKLNPKNSKYHYYKGLTYY---YLDRPD-DSIKE-FN 581

Query: 270 RSIRVDPENASLYVHRAMLMLQARGNVDEAIKLIEKAISIDKSCM 314
            +I ++P++AS +  ++  + +  G + +A+  I  AI+++ + +
Sbjct: 582 NAINLNPDDASYHFSKSKALYKL-GRLSQALADINAAINLNGNSV 625



 Score = 45.1 bits (105), Expect = 0.11,   Method: Compositional matrix adjust.
 Identities = 51/232 (21%), Positives = 97/232 (41%), Gaps = 38/232 (16%)

Query: 153 FTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQR- 211
             KA   L+E  K  P+    Y+ +G+      +Y +A+  L++ I+LNP+    R  R 
Sbjct: 362 LIKAVEKLEEEIKRKPDNPFYYWAKGEALYELKRYNDAIEVLNRAISLNPDNSEYRFLRG 421

Query: 212 ------------------------------HFVVHKMIVPGDRERV----EQSLKEFRNF 237
                                         +F+V+ +   G R+R     E+ +K +   
Sbjct: 422 KALYEIFRIDEALEELWTAIQLDHFNIKYLYFMVNALYSKGRRKRTVENNEKIIKSYDEK 481

Query: 238 VDTHSNVVEACTLFAQVLVDQEDFDGAEEYFNRSIRVDPENASLYVHRAMLMLQARGNVD 297
           +  + N  E      +VL +   F+ A E  N +I+++P N      +  L+ +     +
Sbjct: 482 IRENPNNPEYYYAKGKVLSNLNRFEEALEELNNAIKLNPNNPEYRFGKGYLLYELY-RYE 540

Query: 298 EAIKLIEKAISID-KSCMFAYETLGTIEVQRGRLEEAVKCFNKALPLARDEA 348
           EA++ +  AI ++ K+  + Y   G       R ++++K FN A+ L  D+A
Sbjct: 541 EALEELNNAIKLNPKNSKYHYYK-GLTYYYLDRPDDSIKEFNNAINLNPDDA 591



 Score = 43.5 bits (101), Expect = 0.33,   Method: Compositional matrix adjust.
 Identities = 79/400 (19%), Positives = 168/400 (42%), Gaps = 64/400 (16%)

Query: 156 AFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPN---FHVARAQRH 212
           A  ++D+A ++DP   + ++ +G I     + E+A+    K I  NPN   ++  + +  
Sbjct: 256 ALKEIDKAMRLDPYKPEYHFLKGLILYDVHENEDAIEAFYKAIRQNPNNPEYYYFKGKAL 315

Query: 213 FVVHKMIVPGDRERVEQSLKEFRNFVDTHSNVVEACTLFAQVLVDQEDFDGAE------- 265
           + V K          E +L+ F N +  +    E      + L + + ++ A        
Sbjct: 316 YEVKKY---------EDALEAFDNAIRLNDKRPEYYFFKGEALYELKRYNDAYKVLIKAV 366

Query: 266 EYFNRSIRVDPENASLYVHRAMLMLQARGNVDEAIKLIEKAISIDKSCMFAYETLGTIEV 325
           E     I+  P+N   Y  +   + + +   ++AI+++ +AIS++          G    
Sbjct: 367 EKLEEEIKRKPDNPFYYWAKGEALYELK-RYNDAIEVLNRAISLNPDNSEYRFLRGKALY 425

Query: 326 QRGRLEEAVKCFNKALPLARDEAELSHIYSLRDAAIAQMKVCERYNIKKKVSPRSQNITK 385
           +  R++EA++    A+ L  D   + ++Y + +A  ++ +             R + +  
Sbjct: 426 EIFRIDEALEELWTAIQL--DHFNIKYLYFMVNALYSKGR-------------RKRTVEN 470

Query: 386 NEKLAIK----QLRENNDIIIRPADKGGKTVVMDKADYTQKMTSILNSNDYEIIPGDPTK 441
           NEK+ IK    ++REN +    P     K  V+   +  ++    LN N  ++ P +P  
Sbjct: 471 NEKI-IKSYDEKIRENPN---NPEYYYAKGKVLSNLNRFEEALEELN-NAIKLNPNNP-- 523

Query: 442 TIEESEKYGNLENESGQKHAASD---FTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQ 498
                      E   G+ +   +   + +A  +L+ A K++P  +  +Y +G  Y    +
Sbjct: 524 -----------EYRFGKGYLLYELYRYEEALEELNNAIKLNPKNSKYHYYKGLTYYYLDR 572

Query: 499 YEEALRNLDKTIALNPNFHVARAQRHFVWTSTLAELMAFS 538
            +++++  +  I LNP+     A  HF  +  L +L   S
Sbjct: 573 PDDSIKEFNNAINLNPD----DASYHFSKSKALYKLGRLS 608


>gi|298248115|ref|ZP_06971920.1| serine/threonine protein kinase with TPR repeats [Ktedonobacter
           racemifer DSM 44963]
 gi|297550774|gb|EFH84640.1| serine/threonine protein kinase with TPR repeats [Ktedonobacter
           racemifer DSM 44963]
          Length = 652

 Score = 62.8 bits (151), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 51/194 (26%), Positives = 98/194 (50%), Gaps = 17/194 (8%)

Query: 155 KAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQRHFV 214
           +A    ++A ++DP  A+ Y  +G +     + EEAL   ++ I ++P    A   +   
Sbjct: 367 EALQAYEQAIRLDPTSAEVYGNKGLLLRRLNRMEEALAAYEQAIHIDPTHVSAYFGKGMA 426

Query: 215 VHKMIVPGDRERVEQSLKEFR-----NFVDTHSNVVEACTLFAQVLVDQEDFDGAEEYFN 269
           + K+      +R E++L  F      N  D + + ++ C+L  ++L   E+   A   F 
Sbjct: 427 LQKL------KRDEEALPVFEQAIQLNPTDANIHFLKGCSL--EMLGRAEE---ALTAFE 475

Query: 270 RSIRVDPENASLYVHRAMLMLQARGNVDEAIKLIEKAISIDKSCMFAYETLGTIEVQRGR 329
           + I ++P   S Y H+ +L L+  G  +EA++  E++I +D +   AY+  G +    GR
Sbjct: 476 QVIHLEPTRISAYSHKGIL-LRTLGRHEEALEAFEQSIRLDPTNADAYQAKGEVLDTLGR 534

Query: 330 LEEAVKCFNKALPL 343
           LEEA++ F +++ L
Sbjct: 535 LEEALEAFEQSIRL 548



 Score = 59.3 bits (142), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 53/195 (27%), Positives = 93/195 (47%), Gaps = 7/195 (3%)

Query: 155 KAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQRHFV 214
           +A    ++A +++P  A+ ++ +G    + G+ EEAL   ++ I L P    A +     
Sbjct: 435 EALPVFEQAIQLNPTDANIHFLKGCSLEMLGRAEEALTAFEQVIHLEPTRISAYS----- 489

Query: 215 VHKMIVPGDRERVEQSLKEFRNFVDTHSNVVEACTLFAQVLVDQEDFDGAEEYFNRSIRV 274
            HK I+     R E++L+ F   +       +A     +VL      + A E F +SIR+
Sbjct: 490 -HKGILLRTLGRHEEALEAFEQSIRLDPTNADAYQAKGEVLDTLGRLEEALEAFEQSIRL 548

Query: 275 DPENASLYVHRAMLMLQARGNVDEAIKLIEKAISIDKSCMFAYETLGTIEVQRGRLEEAV 334
           +P++AS+Y  +  L L    +++EA+   E AI +D      Y T G +    G  EEA+
Sbjct: 549 NPKDASVYFSKG-LTLWGLKHMEEALANFEYAIQLDPKNATFYRTKGILLRIIGHNEEAL 607

Query: 335 KCFNKALPLARDEAE 349
                A+ L  ++AE
Sbjct: 608 TALEYAVQLRPNDAE 622



 Score = 54.3 bits (129), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 46/188 (24%), Positives = 93/188 (49%), Gaps = 11/188 (5%)

Query: 155 KAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQRHFV 214
           +A    ++   ++P    +Y  +G +    G++EEAL   +++I L+P    A   +  V
Sbjct: 469 EALTAFEQVIHLEPTRISAYSHKGILLRTLGRHEEALEAFEQSIRLDPTNADAYQAKGEV 528

Query: 215 VHKMIVPGDRERVEQSLKEFRNFVDTHSNVVEACTLFAQ--VLVDQEDFDGAEEYFNRSI 272
           +  +       R+E++L+ F   +    N  +A   F++   L   +  + A   F  +I
Sbjct: 529 LDTL------GRLEEALEAFEQSIRL--NPKDASVYFSKGLTLWGLKHMEEALANFEYAI 580

Query: 273 RVDPENASLYVHRAMLMLQARGNVDEAIKLIEKAISIDKSCMFAYETLGTIEVQRGRLEE 332
           ++DP+NA+ Y  + +L L+  G+ +EA+  +E A+ +  +   AY+  G    + GR+ E
Sbjct: 581 QLDPKNATFYRTKGIL-LRIIGHNEEALTALEYAVQLRPNDAEAYQNKGYALEKLGRMSE 639

Query: 333 AVKCFNKA 340
           A + + KA
Sbjct: 640 AHQAYQKA 647



 Score = 46.2 bits (108), Expect = 0.044,   Method: Compositional matrix adjust.
 Identities = 54/236 (22%), Positives = 107/236 (45%), Gaps = 35/236 (14%)

Query: 297 DEAIKLIEKAISIDKSCMFAYETLGTIEVQRGRLEEAVKCFNKALPLARDEAELSHIYSL 356
           +EA+ L E+AI  +     +Y   G I  +  R EEA++ + +A+ L    AE   +Y  
Sbjct: 332 EEALVLCERAIQDEPVEAVSYSLKGIILGKLRRQEEALQAYEQAIRLDPTSAE---VYGN 388

Query: 357 RDAAIAQMKVCER----YNIKKKVSPRSQNITKNEKLAIKQLRENND--------IIIRP 404
           +   + ++   E     Y     + P   +    + +A+++L+ + +        I + P
Sbjct: 389 KGLLLRRLNRMEEALAAYEQAIHIDPTHVSAYFGKGMALQKLKRDEEALPVFEQAIQLNP 448

Query: 405 AD------KGGKTVVMDKADYTQKMTSILNSNDYEIIPGDPTKTIEESEKYGNLENESGQ 458
            D      KG    ++ +A+  + +T+       ++I  +PT+    S K G L    G+
Sbjct: 449 TDANIHFLKGCSLEMLGRAE--EALTAF-----EQVIHLEPTRISAYSHK-GILLRTLGR 500

Query: 459 KHAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNP 514
                   +A    +++ ++DP  AD+Y  +G++    G+ EEAL   +++I LNP
Sbjct: 501 HE------EALEAFEQSIRLDPTNADAYQAKGEVLDTLGRLEEALEAFEQSIRLNP 550


>gi|341896987|gb|EGT52922.1| CBN-DNJ-7 protein [Caenorhabditis brenneri]
          Length = 495

 Score = 62.8 bits (151), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 91/379 (24%), Positives = 151/379 (39%), Gaps = 73/379 (19%)

Query: 149 AASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVAR 208
           A + F  A      A ++DP    + Y+R   Y   G+ + A+ +L++ + L P+F+ AR
Sbjct: 37  ARAQFADALTQYHAAIELDPKNYQAVYRRATTYLAMGRGKAAIVDLERVLELKPDFYGAR 96

Query: 209 AQRHFVVHKMIVPGDRERVEQSLKEFRNFVDTHSNVVEACTLFAQ--VLVDQ-------E 259
            QR  ++ K    G+ E  E       N   T++ V E   L  Q   L  Q        
Sbjct: 97  LQRANILLKQ---GELEAAENDYNVVLNHDKTNTEVQEKTALIEQHRQLRHQIKSSFASG 153

Query: 260 DFDGAEEYFNRSIRVDPENASLYVHRAMLMLQARGNVDEAI---KLIEKAISIDKSCMF- 315
           D +  EEY N  I V   +A+LY  RA   L+ RG + +AI   +++ K  +     MF 
Sbjct: 154 DCNTVEEYINHIIEVQVWDATLYRMRAKC-LEERGELKKAIHDMRIVSKLSTDSTDTMFE 212

Query: 316 AYETLGTIEVQRGRLEEAVKCFNKALPLARDEAELSHIYSLRDAAIAQMKVCERYNIKKK 375
             + L T+    G LEE++    + L L  D       Y      +  ++      +KKK
Sbjct: 213 TSKLLYTV----GDLEESLNVIRECLKLNPDHKSCYPFYKKLRKVVKSLET-----MKKK 263

Query: 376 VSPRSQNITKNEKLAIKQLRENNDIIIRPADKGGKTVVMDKADYTQKMTSILNSNDYEII 435
           V+                   N+D +    ++G KT+  D        T  +  N + I 
Sbjct: 264 VA-------------------NSDWMA-CLEEGQKTMKFDP-------TPSVQLNVFRIT 296

Query: 436 PGDPTKTIEESEKYGNLENESGQKHAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCL 495
                            + E+G        T+A A+ ++  + DP+ AD   +R + Y L
Sbjct: 297 --------------NRCQREAGH------ITEAIAECNQILEDDPSDADVLCERAEAYLL 336

Query: 496 FGQYEEALRNLDKTIALNP 514
              Y+ A+ +  K   +NP
Sbjct: 337 EEDYDAAIEDYQKATEVNP 355



 Score = 39.3 bits (90), Expect = 5.8,   Method: Compositional matrix adjust.
 Identities = 25/82 (30%), Positives = 40/82 (48%), Gaps = 3/82 (3%)

Query: 442 TIEESEKYGNLENESGQKHAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEE 501
           T EE  K+  L     Q  A + F  A      A ++DP    + Y+R   Y   G+ + 
Sbjct: 21  TAEEVAKHLEL---GSQFLARAQFADALTQYHAAIELDPKNYQAVYRRATTYLAMGRGKA 77

Query: 502 ALRNLDKTIALNPNFHVARAQR 523
           A+ +L++ + L P+F+ AR QR
Sbjct: 78  AIVDLERVLELKPDFYGARLQR 99


>gi|443474936|ref|ZP_21064901.1| Tetratricopeptide TPR_1 repeat-containing protein [Pseudanabaena
           biceps PCC 7429]
 gi|443020263|gb|ELS34241.1| Tetratricopeptide TPR_1 repeat-containing protein [Pseudanabaena
           biceps PCC 7429]
          Length = 303

 Score = 62.8 bits (151), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 54/248 (21%), Positives = 114/248 (45%), Gaps = 13/248 (5%)

Query: 122 TQLVEDTSVDPKIKVNAHIKRAVVHLHAASDFTKAFADLDEAEKVDPNVADSYYQRGQIY 181
            Q+ ++  V P    +  ++R   ++    +   A      A + +P +  ++Y  G  Y
Sbjct: 34  VQVQQEIVVPPNETADQLLERGNAYVRL-GNLEGAIVIFRAAIQKNPELTVAHYNLGLAY 92

Query: 182 CLFGQYEEALRNLDKTIALNPNFHVARAQRHFVVHKMIVPGDRERVEQSLKEFRNFVDTH 241
              G+ +EA+ +  +   L+P F +A +    +   ++  GD  R   SL+     +   
Sbjct: 93  AQAGKLKEAIHSFQRATRLDPKFAIAYSN---LGAALLQSGDANRAIPSLQRA---ISLD 146

Query: 242 SNVVEACTLFAQVLVDQEDFDGAEEYFNRSIRVDPENASLYVHRAMLMLQARGNVDEAIK 301
             +  A       L +++D +GA    N++++++P+ A   ++   L++Q +GN+ +AI 
Sbjct: 147 PKLSVAYYNLGLALKEKKDINGAIANLNQALKLNPQ-APETIYNLGLLIQTQGNITKAIA 205

Query: 302 LIEKAISIDKSCMFAYETLGTIEVQRGRLEEAVKCFNKALPLARDEAELSHIYSLRDAAI 361
              KA+ ++     AY  LG   + +G+ E A+     AL   +D AE    Y+L    +
Sbjct: 206 YYAKALQLNPEYAEAYYNLGAALLIQGQTENAIGQLRNALQFRKDYAE--AFYTL---GV 260

Query: 362 AQMKVCER 369
           AQ++  ++
Sbjct: 261 AQVRAGQK 268



 Score = 53.5 bits (127), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 45/211 (21%), Positives = 93/211 (44%), Gaps = 11/211 (5%)

Query: 131 DPKIKVNAHIKRAVVHLHAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEA 190
           +P++ V AH    + +  A     +A      A ++DP  A +Y   G      G    A
Sbjct: 78  NPELTV-AHYNLGLAYAQA-GKLKEAIHSFQRATRLDPKFAIAYSNLGAALLQSGDANRA 135

Query: 191 LRNLDKTIALNPNFHVARAQRHFVVHKMIVPGDRERVEQSLKEFRNFVDTHSNVVEACTL 250
           + +L + I+L+P   VA       +       +++ +  ++      +  +    E    
Sbjct: 136 IPSLQRAISLDPKLSVAYYNLGLALK------EKKDINGAIANLNQALKLNPQAPETIYN 189

Query: 251 FAQVLVDQEDFDGAEEYFNRSIRVDPENASLYVH-RAMLMLQARGNVDEAIKLIEKAISI 309
              ++  Q +   A  Y+ ++++++PE A  Y +  A L++Q  G  + AI  +  A+  
Sbjct: 190 LGLLIQTQGNITKAIAYYAKALQLNPEYAEAYYNLGAALLIQ--GQTENAIGQLRNALQF 247

Query: 310 DKSCMFAYETLGTIEVQRGRLEEAVKCFNKA 340
            K    A+ TLG  +V+ G+ ++A++ F +A
Sbjct: 248 RKDYAEAFYTLGVAQVRAGQKQDAMQSFIQA 278


>gi|119492428|ref|ZP_01623749.1| serine/threonine kinase [Lyngbya sp. PCC 8106]
 gi|119453094|gb|EAW34263.1| serine/threonine kinase [Lyngbya sp. PCC 8106]
          Length = 724

 Score = 62.8 bits (151), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 82/372 (22%), Positives = 146/372 (39%), Gaps = 43/372 (11%)

Query: 156 AFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQRHFVV 215
           A   L +A   + +  ++Y+QRG  Y    QY+ A+ +  + I LNPN+  A   R    
Sbjct: 354 AVRTLTQAINYNSDNPEAYHQRGNAYYDLEQYQNAIEDYTQAIQLNPNYTNAYFNRGLAR 413

Query: 216 HKMIVPGDRERVEQSLKEFRNFVDTHSNVVEACTLFAQVLVDQEDFDGAEEYFNRSIRVD 275
           +      D + +  ++ ++   ++     V+A           ED+  A E ++  IR+ 
Sbjct: 414 Y------DAQDLSGAIADYSKVIELEPTDVDAYYKRGLAHYALEDYQKAIEDYSEVIRIQ 467

Query: 276 PENASLYVHRAMLMLQARGNVDEAIKLIEKAISIDKSCMFAYETLGTIEVQRGRLEEAVK 335
            ++   Y  R +  + + G++   +    +AI +D   + AY   G      G  + A+ 
Sbjct: 468 SDHPLAYRSRGIARVNS-GDLQGGLADYTQAIRLDSKNILAYYDRGRTRFHLGDYQGALA 526

Query: 336 CFNKALPLARDEAELSHIYSLRDAAIAQMKVCERYNIKKKVSPRSQNITKNEKLAIKQLR 395
            +++ + L  D    S +Y  R           + N+ K      Q    +   AI QL 
Sbjct: 527 DYDRVIELQPDN---SFVYGNR--------CSTQINLSKH-----QAAIDDCTKAI-QLE 569

Query: 396 ENNDIIIRPADKGGKTVVMDKADYTQKMTSILNSNDYEIIPGDPTKTIEESEK-YGNLEN 454
            N                     Y  +  + LN ++ +    D TK IE +   +    N
Sbjct: 570 PN------------------AVAYNNRCVAYLNISELDKALADCTKAIELTPTDHKAYSN 611

Query: 455 ESGQKHAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNP 514
               + A  DF  A AD  +A +++PN A SY  R   Y     Y +A+ +  + I L P
Sbjct: 612 RGMVQVAQQDFQAAIADYTKAIELNPNDAQSYSNRATTYYELQDYNQAIADYVQAIRLKP 671

Query: 515 NFHVARAQRHFV 526
           ++  A   R  V
Sbjct: 672 DYPNAYYGRGIV 683



 Score = 58.9 bits (141), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 67/317 (21%), Positives = 128/317 (40%), Gaps = 46/317 (14%)

Query: 65  LSKAKRAFEHEDYLTAIRHCTEEIESTSSNHTKALARLLRATVYIFTSQSTKAIEDLTQL 124
            S+     E  +   A+R  T+ I   S N     A   R   Y    Q   AIED TQ 
Sbjct: 339 FSQGVEKLEKGNPKAAVRTLTQAINYNSDNPE---AYHQRGNAYYDLEQYQNAIEDYTQA 395

Query: 125 VEDTSVDPKIKVNAHIKRAVVHLHAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLF 184
           ++   ++P    NA+  R +   + A D + A AD  +  +++P   D+YY+RG  +   
Sbjct: 396 IQ---LNPNY-TNAYFNRGLAR-YDAQDLSGAIADYSKVIELEPTDVDAYYKRGLAHYAL 450

Query: 185 GQYEEALRNLDKTIALNPNFHVARAQRHFVVHKMIVPGDRERVEQSLKEFRNFVDTHSNV 244
             Y++A+ +  + I +  +  +A   R       +  GD   ++  L ++   +   S  
Sbjct: 451 EDYQKAIEDYSEVIRIQSDHPLAYRSRGIA---RVNSGD---LQGGLADYTQAIRLDSKN 504

Query: 245 VEACTLFAQVLVDQEDFDGAEEYFNRSIRVDPENASLYVHRAMLMLQ------ARGNVDE 298
           + A     +      D+ GA   ++R I + P+N+ +Y +R    +       A  +  +
Sbjct: 505 ILAYYDRGRTRFHLGDYQGALADYDRVIELQPDNSFVYGNRCSTQINLSKHQAAIDDCTK 564

Query: 299 AIKLIEKAISIDKSCMF--------------------------AYETLGTIEVQRGRLEE 332
           AI+L   A++ +  C+                           AY   G ++V +   + 
Sbjct: 565 AIQLEPNAVAYNNRCVAYLNISELDKALADCTKAIELTPTDHKAYSNRGMVQVAQQDFQA 624

Query: 333 AVKCFNKALPLARDEAE 349
           A+  + KA+ L  ++A+
Sbjct: 625 AIADYTKAIELNPNDAQ 641



 Score = 53.9 bits (128), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 43/135 (31%), Positives = 65/135 (48%), Gaps = 9/135 (6%)

Query: 80  AIRHCTEEIESTSSNHTKALARLLRATVYIFTSQSTKAIEDLTQLVEDTSVDPKIKVNAH 139
           AI  CT+ I+   +    A+A   R   Y+  S+  KA+ D T+ +E T  D K    A+
Sbjct: 558 AIDDCTKAIQLEPN----AVAYNNRCVAYLNISELDKALADCTKAIELTPTDHK----AY 609

Query: 140 IKRAVVHLHAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIA 199
             R +V + A  DF  A AD  +A +++PN A SY  R   Y     Y +A+ +  + I 
Sbjct: 610 SNRGMVQV-AQQDFQAAIADYTKAIELNPNDAQSYSNRATTYYELQDYNQAIADYVQAIR 668

Query: 200 LNPNFHVARAQRHFV 214
           L P++  A   R  V
Sbjct: 669 LKPDYPNAYYGRGIV 683


>gi|47222947|emb|CAF99103.1| unnamed protein product [Tetraodon nigroviridis]
          Length = 1037

 Score = 62.8 bits (151), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 59/256 (23%), Positives = 119/256 (46%), Gaps = 15/256 (5%)

Query: 88  IESTSSNHTKALARLLRATVYIFTSQSTKAIEDLTQLVEDTSVDPKIKVNAHIKRAVVHL 147
           + S   N  KAL RL  A     TS +    +++   ++     P   V       V   
Sbjct: 137 VRSDLGNLLKALGRLEEAKPAAATSLTKS--KNMACYLKAIETQPNFAVAWSNLGCV--F 192

Query: 148 HAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVA 207
           +A  +   A    ++A  +DPN  D+Y   G +      ++ A+    + ++L+PN    
Sbjct: 193 NAQGEIWLAIHHFEKAVTLDPNFLDAYINLGNVLKEARIFDRAVAGYLRALSLSPN---- 248

Query: 208 RAQRHFVVHKMI--VPGDRERVEQSLKEFRNFVDTHSNVVEACTLFAQVLVDQEDFDGAE 265
               H VVH  +  V  ++  ++ ++  +R  ++   +  +A    A  L ++ +   AE
Sbjct: 249 ----HAVVHGNLACVYYEQGLIDLAIDTYRRAIELQPHFPDAYCNLANALKEKGNVSEAE 304

Query: 266 EYFNRSIRVDPENASLYVHRAMLMLQARGNVDEAIKLIEKAISIDKSCMFAYETLGTIEV 325
           E +N ++R+ P +A    + A +  + +GN++EAI+L  KA+ +      A+  L ++  
Sbjct: 305 ECYNTALRLCPTHADSLNNLANIK-REQGNIEEAIQLYRKALEVFPEFAAAHSNLASVLQ 363

Query: 326 QRGRLEEAVKCFNKAL 341
           Q+G+L+EA+  + +A+
Sbjct: 364 QQGKLQEALMHYKEAI 379



 Score = 40.8 bits (94), Expect = 2.0,   Method: Compositional matrix adjust.
 Identities = 80/386 (20%), Positives = 149/386 (38%), Gaps = 57/386 (14%)

Query: 163 AEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQRHFVVHKMIVPG 222
           A K +P +A++Y   G +Y   GQ +EA+ +    + L P+F         +   ++  G
Sbjct: 59  AIKQNPLLAEAYSNLGNVYKERGQLQEAIEHYRHALRLKPDFIDGYIN---LAAALVAAG 115

Query: 223 DRERVEQSL--------------KEFRNFVDTHSNVVEACTLFAQVLVDQEDFDGAEEYF 268
           D E   Q+                +  N +     + EA    A  L   ++       +
Sbjct: 116 DMEGAVQAYVSALQYNPDLYCVRSDLGNLLKALGRLEEAKPAAATSLTKSKNM----ACY 171

Query: 269 NRSIRVDPENASLYVHRAMLMLQARGNVDEAIKLIEKAISIDKSCMFAYETLGTIEVQRG 328
            ++I   P  A  + +    +  A+G +  AI   EKA+++D + + AY  LG +  +  
Sbjct: 172 LKAIETQPNFAVAWSNLG-CVFNAQGEIWLAIHHFEKAVTLDPNFLDAYINLGNVLKEAR 230

Query: 329 RLEEAVKCFNKALPLARDEA----ELSHIY---SLRDAAIAQMKVCERYNIKKKVSPRSQ 381
             + AV  + +AL L+ + A     L+ +Y    L D AI      + Y    ++ P   
Sbjct: 231 IFDRAVAGYLRALSLSPNHAVVHGNLACVYYEQGLIDLAI------DTYRRAIELQPHFP 284

Query: 382 NITKN------EKLAIKQLRENNDIIIRPADKGGKTVVMDKADYTQKMTSI-----LNSN 430
           +   N      EK  + +  E  +  +R       + + + A+  ++  +I     L   
Sbjct: 285 DAYCNLANALKEKGNVSEAEECYNTALRLCPTHADS-LNNLANIKREQGNIEEAIQLYRK 343

Query: 431 DYEIIPGDPTKTIEESEKYGNLENESGQKHAASDFTKAFADLDEAEKVDPNVADSYYQRG 490
             E+ P       E +  + NL +   Q+       +A     EA ++ P  AD+Y   G
Sbjct: 344 ALEVFP-------EFAAAHSNLASVLQQQ---GKLQEALMHYKEAIRISPTFADAYSNMG 393

Query: 491 QIYCLFGQYEEALRNLDKTIALNPNF 516
                    + AL+   + I +NP F
Sbjct: 394 NTLKEMQDVQGALQCYTRAIQINPAF 419


>gi|414076244|ref|YP_006995562.1| TPR repeat-containing proptein [Anabaena sp. 90]
 gi|413969660|gb|AFW93749.1| TPR repeat-containing proptein [Anabaena sp. 90]
          Length = 972

 Score = 62.8 bits (151), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 40/194 (20%), Positives = 90/194 (46%), Gaps = 7/194 (3%)

Query: 153 FTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQRH 212
           F++A A  D+   + P+    +Y RG I    G ++ A+ + D+ IA+ P++  A + R 
Sbjct: 356 FSEAIAAYDQTLALKPDFYQVWYSRGSILGELGDFDAAIASFDQAIAIKPDYQAAWSSRG 415

Query: 213 FVVHKMIVPGDRERVEQSLKEFRNFVDTHSNVVEACTLFAQVLVDQEDFDGAEEYFNRSI 272
             + K+ + G+      ++  +   V+      EA       L   E +  A   +++++
Sbjct: 416 LALLKLGLIGE------AIDSYDQAVNLEPQDSEAWYYRGIALAVVEQYAEAIASYDQAL 469

Query: 273 RVDPENASLYVHRAMLMLQARGNVDEAIKLIEKAISIDKSCMFAYETLGTIEVQRGRLEE 332
            + P    +++ R +++   +  + EAI+  ++A++I      A+   G      GR E+
Sbjct: 470 NLQPNYHEVWIDRGVVLFNLKQWL-EAIESWDQALAIQPEFYLAWYNRGVSFEHLGRRED 528

Query: 333 AVKCFNKALPLARD 346
           A+  + +A+ +  D
Sbjct: 529 AISSYQQAIAIKPD 542



 Score = 49.3 bits (116), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 39/194 (20%), Positives = 80/194 (41%), Gaps = 41/194 (21%)

Query: 150 ASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARA 209
           A D   A A  + A ++ P+V + ++ +G +     ++ EA+   D+T+AL P+F+    
Sbjct: 319 AGDLLNALALYERASQIQPHVYEYWFNQGLVLFYLQRFSEAIAAYDQTLALKPDFYQVWY 378

Query: 210 QRHFVVHKMIVPGDRERVEQSLKEFRNFVDTHSNVVEACTLFAQVLVDQEDFDGAEEYFN 269
            R                                          +L +  DFD A   F+
Sbjct: 379 SR----------------------------------------GSILGELGDFDAAIASFD 398

Query: 270 RSIRVDPENASLYVHRAMLMLQARGNVDEAIKLIEKAISIDKSCMFAYETLGTIEVQRGR 329
           ++I + P+  + +  R + +L+  G + EAI   ++A++++     A+   G       +
Sbjct: 399 QAIAIKPDYQAAWSSRGLALLKL-GLIGEAIDSYDQAVNLEPQDSEAWYYRGIALAVVEQ 457

Query: 330 LEEAVKCFNKALPL 343
             EA+  +++AL L
Sbjct: 458 YAEAIASYDQALNL 471



 Score = 41.6 bits (96), Expect = 1.0,   Method: Compositional matrix adjust.
 Identities = 17/59 (28%), Positives = 32/59 (54%)

Query: 465 FTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQR 523
           F++A A  D+   + P+    +Y RG I    G ++ A+ + D+ IA+ P++  A + R
Sbjct: 356 FSEAIAAYDQTLALKPDFYQVWYSRGSILGELGDFDAAIASFDQAIAIKPDYQAAWSSR 414



 Score = 40.8 bits (94), Expect = 1.8,   Method: Compositional matrix adjust.
 Identities = 22/76 (28%), Positives = 38/76 (50%), Gaps = 4/76 (5%)

Query: 462 ASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARA 521
           A D   A A  + A ++ P+V + ++ +G +     ++ EA+   D+T+AL P+F+    
Sbjct: 319 AGDLLNALALYERASQIQPHVYEYWFNQGLVLFYLQRFSEAIAAYDQTLALKPDFYQVWY 378

Query: 522 QRHFVWTSTLAELMAF 537
            R     S L EL  F
Sbjct: 379 SR----GSILGELGDF 390



 Score = 40.8 bits (94), Expect = 2.1,   Method: Compositional matrix adjust.
 Identities = 18/67 (26%), Positives = 34/67 (50%)

Query: 145 VHLHAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNF 204
           + L     + +A A  D+A  + PN  + +  RG +     Q+ EA+ + D+ +A+ P F
Sbjct: 450 IALAVVEQYAEAIASYDQALNLQPNYHEVWIDRGVVLFNLKQWLEAIESWDQALAIQPEF 509

Query: 205 HVARAQR 211
           ++A   R
Sbjct: 510 YLAWYNR 516



 Score = 39.3 bits (90), Expect = 5.6,   Method: Compositional matrix adjust.
 Identities = 18/60 (30%), Positives = 32/60 (53%)

Query: 467 KAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQRHFV 526
           +A    D+A  ++P  ++++Y RG    +  QY EA+ + D+ + L PN+H     R  V
Sbjct: 426 EAIDSYDQAVNLEPQDSEAWYYRGIALAVVEQYAEAIASYDQALNLQPNYHEVWIDRGVV 485


>gi|398355141|ref|YP_006400605.1| O-linked GlcNAc transferase [Sinorhizobium fredii USDA 257]
 gi|390130467|gb|AFL53848.1| O-linked GlcNAc transferase [Sinorhizobium fredii USDA 257]
          Length = 296

 Score = 62.8 bits (151), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 51/187 (27%), Positives = 85/187 (45%), Gaps = 7/187 (3%)

Query: 157 FADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQRHFVVH 216
            A L      +P+  ++Y  RG  Y   G++  AL + D+ I LNP+F+ A A R  V  
Sbjct: 65  IASLSSVIASNPSDPEAYNVRGSAYGRAGEFRRALADFDQAIKLNPSFYQAYANRALVHR 124

Query: 217 KMIVPGDRERVEQSLKEFRNFVDTHSNVVEACTLFAQVLVDQEDFDGAEEYFNRSIRVDP 276
            M   G++   + +L ++   +  + N   A      +       D A   FN+++++D 
Sbjct: 125 NM---GNQ---QAALSDYNAALQLNPNYDVAYIGRGNLYRQANQLDAAFNDFNKAVQLDT 178

Query: 277 ENASLYVHRAMLMLQARGNVDEAIKLIEKAISIDKSCMFAYETLGTIEVQRGRLEEAVKC 336
            +   Y +R  L+ QAR +  +AI+    AIS+  S    Y   G   V +G  + A   
Sbjct: 179 TDPRAYHNRG-LIYQARNDHAQAIEDFSTAISLSPSSPEPYNGRGISYVAQGDDDNAFSD 237

Query: 337 FNKALPL 343
           FN A+ L
Sbjct: 238 FNTAINL 244



 Score = 47.4 bits (111), Expect = 0.019,   Method: Compositional matrix adjust.
 Identities = 32/117 (27%), Positives = 53/117 (45%), Gaps = 15/117 (12%)

Query: 423 MTSILNSNDYEIIPGDPTKTIEESEKYGNLENESGQKHAASDFTKAFADLDEAEKVDPNV 482
           ++S++ SN     P DP         YG           A +F +A AD D+A K++P+ 
Sbjct: 68  LSSVIASN-----PSDPEAYNVRGSAYGR----------AGEFRRALADFDQAIKLNPSF 112

Query: 483 ADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQRHFVWTSTLAELMAFSD 539
             +Y  R  ++   G  + AL + +  + LNPN+ VA   R  ++        AF+D
Sbjct: 113 YQAYANRALVHRNMGNQQAALSDYNAALQLNPNYDVAYIGRGNLYRQANQLDAAFND 169



 Score = 40.8 bits (94), Expect = 1.6,   Method: Compositional matrix adjust.
 Identities = 23/71 (32%), Positives = 35/71 (49%)

Query: 469 FADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQRHFVWT 528
            A L      +P+  ++Y  RG  Y   G++  AL + D+ I LNP+F+ A A R  V  
Sbjct: 65  IASLSSVIASNPSDPEAYNVRGSAYGRAGEFRRALADFDQAIKLNPSFYQAYANRALVHR 124

Query: 529 STLAELMAFSD 539
           +   +  A SD
Sbjct: 125 NMGNQQAALSD 135


>gi|392966968|ref|ZP_10332386.1| Tetratricopeptide repeat protein 6 Short=TPR repeat protein 6
           [Fibrisoma limi BUZ 3]
 gi|387843765|emb|CCH54434.1| Tetratricopeptide repeat protein 6 Short=TPR repeat protein 6
           [Fibrisoma limi BUZ 3]
          Length = 445

 Score = 62.8 bits (151), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 97/400 (24%), Positives = 158/400 (39%), Gaps = 56/400 (14%)

Query: 131 DPKIKVNAHIKRAVVHLHAA------SDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLF 184
           D  I++NA  K A+ +L          D   A  D   A +++P+   +YY RG      
Sbjct: 84  DRAIELNA--KDALAYLSRGVSKSKQDDHRGALLDFSRAIELNPDDPQTYYSRGVSRSRL 141

Query: 185 GQYEEALRNLDKTIALNPNFHVARAQRHFVVHKMIVPGDRERVEQSLKEFRNFVDTHSNV 244
            Q+  AL +  KTI L PN  +A   R     K+      E    SL +F   ++ +   
Sbjct: 142 EQHRGALADFSKTIELEPNNALALYARGITKQKL------EDYAGSLADFSKVLEMNPRR 195

Query: 245 VEACTLFAQVLVDQEDFDGAEEYFNRSIRVDPENASLYVHRAMLMLQARGNVDE---AIK 301
            +A        ++ +D+ GA    N +I + PE+A  Y +R      A+  +D+   A+ 
Sbjct: 196 AQAFAGRGVSKLELKDYTGAIADLNSAIELGPEDAESYYYRGF----AKAKLDDYKGALA 251

Query: 302 LIEKAISIDKSCMFAYETLGTIEVQRGRLEEAVKCFNKALPLARDEAELSHIYSLRDAAI 361
              + ++++     AY   G    + G  + A++ FN A+     EA  S+     DA +
Sbjct: 252 DYNRTLTLNGDNFRAYYGRGFCRSKLGDQKGAIQDFNTAI-----EANNSNT----DAKV 302

Query: 362 AQMKVCERYNIKKKVSPRSQNITKNEKLAIKQLRENNDIIIRPADKGGKTVVMDKADYTQ 421
                   YN K      ++ I  N +  +++  + ND+    A+            Y  
Sbjct: 303 -------YYNGKI-----TRAILDNLRNLVQERNKINDLSDERAEA-----------YYS 339

Query: 422 KMTSILNSNDYEIIPGDPTKTIEESEKYGNLENESGQ-KHAASDFTKAFADLDEAEKVDP 480
           +  S     D +    D  K IE S  Y       G  K A  D   A  DL+ A K++P
Sbjct: 340 RAVSKNKQGDAKAAIVDLNKAIELSPTYAEAYFTLGMIKSAQGDQKGAVMDLNSAIKLNP 399

Query: 481 NVADSYYQRGQIYCLFGQYEEALRNLDKT--IALNPNFHV 518
             A+ YY RG I    G       +L K   +   P++ V
Sbjct: 400 RYAEVYYVRGIIKHALGDENGGCLDLSKAGELGYTPSYKV 439



 Score = 61.2 bits (147), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 61/239 (25%), Positives = 115/239 (48%), Gaps = 14/239 (5%)

Query: 117 AIEDLTQLVEDTSVDPKIKVNAHIKRAVVHLHAASDFTKAFADLDEAEKVDPNVADSYYQ 176
           ++ D ++++E   ++P+ +  A   R V  L    D+T A ADL+ A ++ P  A+SYY 
Sbjct: 181 SLADFSKVLE---MNPR-RAQAFAGRGVSKLEL-KDYTGAIADLNSAIELGPEDAESYYY 235

Query: 177 RGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQRHFVVHKMIVPGDRERVEQSLKEFRN 236
           RG        Y+ AL + ++T+ LN +   A   R F   K+   GD+   + ++++F  
Sbjct: 236 RGFAKAKLDDYKGALADYNRTLTLNGDNFRAYYGRGFCRSKL---GDQ---KGAIQDFNT 289

Query: 237 FVDTHSNVVEACTLFAQVLVDQ--EDFDGAEEYFNRSIRVDPENASLYVHRAMLMLQARG 294
            ++ +++  +A   +   +     ++     +  N+   +  E A  Y  RA+     +G
Sbjct: 290 AIEANNSNTDAKVYYNGKITRAILDNLRNLVQERNKINDLSDERAEAYYSRAVSK-NKQG 348

Query: 295 NVDEAIKLIEKAISIDKSCMFAYETLGTIEVQRGRLEEAVKCFNKALPLARDEAELSHI 353
           +   AI  + KAI +  +   AY TLG I+  +G  + AV   N A+ L    AE+ ++
Sbjct: 349 DAKAAIVDLNKAIELSPTYAEAYFTLGMIKSAQGDQKGAVMDLNSAIKLNPRYAEVYYV 407



 Score = 50.1 bits (118), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 85/396 (21%), Positives = 153/396 (38%), Gaps = 64/396 (16%)

Query: 151 SDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQ 210
            DFT A      A  ++P  A SYY RG        +  A+ + D+ I LN    +A   
Sbjct: 40  GDFTGALQAFSMAITMNPENAASYYNRGLAKANLKDHRGAILDYDRAIELNAKDALAYLS 99

Query: 211 RHFVVHKM---------------IVPGD----------RERVEQ---SLKEFRNFVDTHS 242
           R     K                + P D          R R+EQ   +L +F   ++   
Sbjct: 100 RGVSKSKQDDHRGALLDFSRAIELNPDDPQTYYSRGVSRSRLEQHRGALADFSKTIELEP 159

Query: 243 NVVEACTLFAQVLVDQ--EDFDGAEEYFNRSIRVDPENASLYVHRAMLMLQARGNVDEAI 300
           N   A  L+A+ +  Q  ED+ G+   F++ + ++P  A  +  R +  L+ + +   AI
Sbjct: 160 N--NALALYARGITKQKLEDYAGSLADFSKVLEMNPRRAQAFAGRGVSKLELK-DYTGAI 216

Query: 301 KLIEKAISIDKSCMFAYETLGTIEVQRGRLEEAVKCFNKALPLARDEAELSHIYSLRDAA 360
             +  AI +      +Y   G  + +    + A+  +N+ L L  D             A
Sbjct: 217 ADLNSAIELGPEDAESYYYRGFAKAKLDDYKGALADYNRTLTLNGDNFR----------A 266

Query: 361 IAQMKVCERYNIKKKVSPRSQNITKNEKLAIKQLRENNDIIIRPADKGGKTVVMDKADYT 420
                 C     + K+  +   I ++   AI+    N D  +    K  + ++ +  +  
Sbjct: 267 YYGRGFC-----RSKLGDQKGAI-QDFNTAIEANNSNTDAKVYYNGKITRAILDNLRNLV 320

Query: 421 QKMTSILNSNDYEIIPGDPTKTIEESEKYGNLENESGQKHAASDFTKAFADLDEAEKVDP 480
           Q+   I + +D            E +E Y    + +  K+   D   A  DL++A ++ P
Sbjct: 321 QERNKINDLSD------------ERAEAY---YSRAVSKNKQGDAKAAIVDLNKAIELSP 365

Query: 481 NVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNF 516
             A++Y+  G I    G  + A+ +L+  I LNP +
Sbjct: 366 TYAEAYFTLGMIKSAQGDQKGAVMDLNSAIKLNPRY 401



 Score = 40.0 bits (92), Expect = 3.2,   Method: Compositional matrix adjust.
 Identities = 39/143 (27%), Positives = 66/143 (46%), Gaps = 14/143 (9%)

Query: 80  AIRHCTEEIESTSSNHTKALARLLRATVYIFTSQSTKAIED-LTQLVEDTSVDPKI---K 135
           AI+     IE+ +SN          A VY +  + T+AI D L  LV++ +    +   +
Sbjct: 283 AIQDFNTAIEANNSNTD--------AKVY-YNGKITRAILDNLRNLVQERNKINDLSDER 333

Query: 136 VNAHIKRAVVHLHAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLD 195
             A+  RAV   +   D   A  DL++A ++ P  A++Y+  G I    G  + A+ +L+
Sbjct: 334 AEAYYSRAVSK-NKQGDAKAAIVDLNKAIELSPTYAEAYFTLGMIKSAQGDQKGAVMDLN 392

Query: 196 KTIALNPNFHVARAQRHFVVHKM 218
             I LNP +      R  + H +
Sbjct: 393 SAIKLNPRYAEVYYVRGIIKHAL 415


>gi|374295924|ref|YP_005046115.1| tetratricopeptide repeat protein [Clostridium clariflavum DSM
           19732]
 gi|359825418|gb|AEV68191.1| tetratricopeptide repeat protein [Clostridium clariflavum DSM
           19732]
          Length = 580

 Score = 62.8 bits (151), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 60/256 (23%), Positives = 107/256 (41%), Gaps = 38/256 (14%)

Query: 150 ASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARA 209
           +  + +A    D+A K++P++ + YY +       G+Y+EA+   D+ I LN  F  A  
Sbjct: 43  SGKYQEAIDSYDKAIKINPDIPEFYYNKAIALYNLGRYDEAIAQYDQVIKLNSQFKDAYI 102

Query: 210 QRHFVV-------------------------------HKMIVPGD-RERVEQSLKEFRNF 237
            +   +                               H +++ G   E +E + K   + 
Sbjct: 103 NKALCLTETNRFDEAISLLDEYIKKYPKDPEGYALKGHNLLLKGSYAEALEMADKVIESK 162

Query: 238 VDTHSNVVEACTLFAQVLVDQEDFDGAEEYFNRSIRVDPENASLYVHRAMLMLQARGNVD 297
                 +  A +  +  L D    D A E    ++ +D  NA+ Y+        A+   D
Sbjct: 163 PKDKGILSMAYSTKSSALTDLGKIDEALEACKTALELDNTNANAYIAMGY-AFYAQKKYD 221

Query: 298 EAIKLIEKAISIDKSCMFAYETLGTIEVQRGRLEEAVKCFNKA--LPLARDEAELSHIYS 355
           EAI++  KAI +  +C+ AY       + + R EEA++C NKA  L   +D    S IY+
Sbjct: 222 EAIEMCNKAIEVMPNCIEAYMNKSVYLMGKKRYEEAIECCNKASELNTPKDPITESKIYT 281

Query: 356 LRDAAIAQMKVCERYN 371
            + + + +MK   +YN
Sbjct: 282 NKSSVLYKMK---KYN 294



 Score = 60.8 bits (146), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 85/363 (23%), Positives = 152/363 (41%), Gaps = 53/363 (14%)

Query: 174 YYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQRHFVVHKMIVPGDRERVEQSLKE 233
           Y+  G  +   G+Y+EA+ + DK I +NP+         F  +K I   +  R ++++ +
Sbjct: 33  YFYEGNNFFNSGKYQEAIDSYDKAIKINPDIP------EFYYNKAIALYNLGRYDEAIAQ 86

Query: 234 FRNFVDTHSNVVEACTLFAQVLVDQEDFDGA----EEYFNRSIRVDPENASLYVHRAMLM 289
           +   +  +S   +A    A  L +   FD A    +EY  +  + DPE  +L  H  +L 
Sbjct: 87  YDQVIKLNSQFKDAYINKALCLTETNRFDEAISLLDEYIKKYPK-DPEGYALKGHNLLL- 144

Query: 290 LQARGNVDEAIKLIEKAISI---DKSCM-FAYETLGTIEVQRGRLEEAVKCFNKALPLAR 345
              +G+  EA+++ +K I     DK  +  AY T  +     G+++EA++    AL L  
Sbjct: 145 ---KGSYAEALEMADKVIESKPKDKGILSMAYSTKSSALTDLGKIDEALEACKTALEL-- 199

Query: 346 DEAELSHIYSLRDAAIAQMK---VCERYNIKKKVSPRSQNITKNEKLAIKQLRENNDIII 402
           D    +   ++  A  AQ K     E  N   +V P       N+ +             
Sbjct: 200 DNTNANAYIAMGYAFYAQKKYDEAIEMCNKAIEVMPNCIEAYMNKSV------------- 246

Query: 403 RPADKGGKTVVMDKADYTQKMTSILNSNDYEIIPGDPTKTIEESEKYGNLENESGQKHAA 462
                     +M K  Y + +     +++    P DP   I ES+ Y    N+S   +  
Sbjct: 247 ---------YLMGKKRYEEAIECCNKASELN-TPKDP---ITESKIY---TNKSSVLYKM 290

Query: 463 SDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQ 522
             + +A    ++A + +P  A +Y  +G      G+YEE+++  DK I L+ N   A   
Sbjct: 291 KKYNEALLAAEKAIEFNPKYAFAYVGKGNALAKEGKYEESIQAFDKAIELDSNCGEAYIS 350

Query: 523 RHF 525
           + F
Sbjct: 351 KAF 353



 Score = 60.5 bits (145), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 64/292 (21%), Positives = 133/292 (45%), Gaps = 16/292 (5%)

Query: 72  FEHEDYLTAIRHCTEEIESTSSNHTKALARLLRATVYIFTSQS-TKAIEDLTQLVE-DTS 129
           +  + Y  AI  C + IE   +     +   +  +VY+   +   +AIE   +  E +T 
Sbjct: 215 YAQKKYDEAIEMCNKAIEVMPN----CIEAYMNKSVYLMGKKRYEEAIECCNKASELNTP 270

Query: 130 VDPKIKVNAHIKRAVVHLHAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEE 189
            DP  +   +  ++ V L+    + +A    ++A + +P  A +Y  +G      G+YEE
Sbjct: 271 KDPITESKIYTNKSSV-LYKMKKYNEALLAAEKAIEFNPKYAFAYVGKGNALAKEGKYEE 329

Query: 190 ALRNLDKTIALNPNFHVARAQRHFVVHKMIVPGDRERVEQSLKEFRNFVDTHSNVVEACT 249
           +++  DK I L+ N   A   + F + K+      + + Q  ++ +N      +   +  
Sbjct: 330 SIQAFDKAIELDSNCGEAYISKAFSLEKL---EKYDELIQLCQKAKNMNSKDPDYFASIY 386

Query: 250 L-FAQVLVDQEDFDGAEEYFNRSIRVDPEN----ASLYVHRAMLMLQARGNVDEAIKLIE 304
           L  +   +   DF  AE+   +++  +P +    A +Y + A  M+    + D+A+   +
Sbjct: 387 LNLSAGYLGISDFSEAEKCLEKALEYEPTDSEVLALIYANYASAMI-GMADYDKALVFND 445

Query: 305 KAISIDKSCMFAYETLGTIEVQRGRLEEAVKCFNKALPLARDEAELSHIYSL 356
           KA+ ++  C  AY + G I +   +L+EA++C + A+    D+ ++  I  L
Sbjct: 446 KALELNSECYEAYVSKGYIFLDLMKLDEAIECCDTAIEKKIDDYKIHKIKGL 497



 Score = 40.4 bits (93), Expect = 2.5,   Method: Compositional matrix adjust.
 Identities = 22/83 (26%), Positives = 41/83 (49%), Gaps = 2/83 (2%)

Query: 462 ASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARA 521
           +  + +A    D+A K++P++ + YY +       G+Y+EA+   D+ I LN  F  A  
Sbjct: 43  SGKYQEAIDSYDKAIKINPDIPEFYYNKAIALYNLGRYDEAIAQYDQVIKLNSQFKDAYI 102

Query: 522 QRHFVWTST--LAELMAFSDEFM 542
            +    T T    E ++  DE++
Sbjct: 103 NKALCLTETNRFDEAISLLDEYI 125


>gi|367010706|ref|XP_003679854.1| hypothetical protein TDEL_0B05140 [Torulaspora delbrueckii]
 gi|359747512|emb|CCE90643.1| hypothetical protein TDEL_0B05140 [Torulaspora delbrueckii]
          Length = 599

 Score = 62.8 bits (151), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 64/242 (26%), Positives = 114/242 (47%), Gaps = 19/242 (7%)

Query: 135 KVNAHIKRAVVHL--HAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALR 192
           ++N++I  A++      A ++ + F   D+A  +DPN   +YY RGQ+Y + GQYE+A +
Sbjct: 344 RLNSYIYMALIMADKGQAEEYYQYF---DKAIALDPNYGPAYYHRGQMYYITGQYEKAGK 400

Query: 193 NLDKTIALNPNFHVARAQRHFVVHKMIVPGDRERVEQSLKEFRNFVDTHSNVVEACTLFA 252
           + DK    + N      Q   + ++     D E +    K  R F        E    +A
Sbjct: 401 DFDKAKECDENNIFPYIQLACLAYREDKFDDCETLFSEAK--RKF----PTAPEVPNFYA 454

Query: 253 QVLVDQEDFDGAEEYFNRSIRVDPENASLYVHRAMLM----LQARG----NVDEAIKLIE 304
           ++L D+ D + A + +  + R++     ++V  A L+    L AR     N  EA  L+E
Sbjct: 455 EILGDKGDLEAALKQYEIAKRLEEALDGIHVGVAPLVGKATLLARQPSVENFREATLLLE 514

Query: 305 KAISIDKSCMFAYETLGTIEVQRGRLEEAVKCFNKALPLARDEAELSHIYSLRDAAIAQM 364
           +A   D +   A   L  +++Q+  ++EA+  F +A  LAR   E     +  +AA  Q 
Sbjct: 515 EACRRDPTSEQAKVGLAQLKLQQEEVDEAINLFEEAANLARTVDEKLQATTFAEAAKVQK 574

Query: 365 KV 366
           ++
Sbjct: 575 RI 576



 Score = 44.3 bits (103), Expect = 0.19,   Method: Compositional matrix adjust.
 Identities = 18/38 (47%), Positives = 26/38 (68%)

Query: 472 LDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKT 509
            D+A  +DPN   +YY RGQ+Y + GQYE+A ++ DK 
Sbjct: 368 FDKAIALDPNYGPAYYHRGQMYYITGQYEKAGKDFDKA 405


>gi|158522428|ref|YP_001530298.1| hypothetical protein Dole_2417 [Desulfococcus oleovorans Hxd3]
 gi|158511254|gb|ABW68221.1| Tetratricopeptide TPR_2 repeat protein [Desulfococcus oleovorans
           Hxd3]
          Length = 762

 Score = 62.8 bits (151), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 47/181 (25%), Positives = 85/181 (46%), Gaps = 8/181 (4%)

Query: 161 DEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQRHFVVHKMIV 220
           D  EK  P +A  +   G    + G  E AL+   K IAL+PN   A     F++ ++  
Sbjct: 418 DVTEK-SPTLARPWSNLGMALQIAGNSEAALQAFQKAIALDPNHMEAHNNSGFILREL-- 474

Query: 221 PGDRERVEQSLKEFRNFVDTHSNVVEACTLFAQVLVDQEDFDGAEEYFNRSIRVDPENAS 280
                R ++++K FR  ++ +    +A         D +D   A   F +++RV+P  + 
Sbjct: 475 ----GRPKEAIKFFRRALEINPAYADAHYNLGLAFFDLKDMAQARTAFEQTLRVNPLYSK 530

Query: 281 LYVHRAMLMLQARGNVDEAIKLIEKAISIDKSCMFAYETLGTIEVQRGRLEEAVKCFNKA 340
            + +  ++++Q  G+ + A+   ++A+  D     AY  LG I  Q+G  ++A   F KA
Sbjct: 531 AHNNLGVILMQ-EGDHEAAVAAYQRALKTDPRFAQAYNNLGIIAYQQGNPDQAASFFKKA 589

Query: 341 L 341
           L
Sbjct: 590 L 590



 Score = 44.7 bits (104), Expect = 0.12,   Method: Compositional matrix adjust.
 Identities = 39/169 (23%), Positives = 76/169 (44%), Gaps = 13/169 (7%)

Query: 147 LHAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNF-- 204
           L  A +   A     +A  +DPN  +++   G I    G+ +EA++   + + +NP +  
Sbjct: 437 LQIAGNSEAALQAFQKAIALDPNHMEAHNNSGFILRELGRPKEAIKFFRRALEINPAYAD 496

Query: 205 -HVARAQRHFVVHKMIVPGDRERVEQSLKEFRNFVDTHSNVVEACTLFAQVLVDQEDFDG 263
            H       F +  M     R   EQ+L+    +   H+N+         +L+ + D + 
Sbjct: 497 AHYNLGLAFFDLKDM--AQARTAFEQTLRVNPLYSKAHNNL-------GVILMQEGDHEA 547

Query: 264 AEEYFNRSIRVDPENASLYVHRAMLMLQARGNVDEAIKLIEKAISIDKS 312
           A   + R+++ DP  A  Y +  ++  Q +GN D+A    +KA++ D +
Sbjct: 548 AVAAYQRALKTDPRFAQAYNNLGIIAYQ-QGNPDQAASFFKKALTADPA 595


>gi|186682271|ref|YP_001865467.1| hypothetical protein Npun_R1867 [Nostoc punctiforme PCC 73102]
 gi|186464723|gb|ACC80524.1| Tetratricopeptide TPR_2 repeat protein [Nostoc punctiforme PCC
           73102]
          Length = 409

 Score = 62.8 bits (151), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 56/216 (25%), Positives = 98/216 (45%), Gaps = 13/216 (6%)

Query: 155 KAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQRHFV 214
           +A A   +A  +DP+ + +Y+  G       Q E A+    K ++L PN+    A  H+ 
Sbjct: 101 EAIAHYKKAISLDPHDSGAYFNLGLTLARLNQLEPAIAQYKKALSLEPNY----ADAHYN 156

Query: 215 VHKMIVPGDRERVEQSLKEFRNFVDTHSNVVEACTLFAQVLVDQEDFDGAEEYFNRSIRV 274
           +   +    + ++ +++ E+   +    +     T     L D+ +   A   + +SI  
Sbjct: 157 LGNALY--TQGKLTEAVTEYTAAIRLKPSYAPTYTRLGNALYDRGELAEAVTQYKKSISF 214

Query: 275 DPE--NASLYVHRAMLMLQARGNVDEAIKLIEKAISIDKSCMFAYETLGTIEVQRGRLEE 332
           DP+  +A  Y+  A   L A+G   EAI     AI +       Y  LG     +G+LEE
Sbjct: 215 DPKYADAHYYLGNA---LYAQGKSAEAIAEYTAAIRLSPKNPAGYNALGNTLYAQGKLEE 271

Query: 333 AVKCFNKALPLARDEAELSHIYSLRDAAIAQMKVCE 368
           A+  + +AL L  + A+ +H Y+L  A  AQ K+ E
Sbjct: 272 AIAQYKQALNLEPNYAD-AH-YNLASAFYAQGKLTE 305



 Score = 54.7 bits (130), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 73/270 (27%), Positives = 112/270 (41%), Gaps = 20/270 (7%)

Query: 255 LVDQEDFDGAEEYFNRSIRVDPENASLYVHRAMLMLQARGNVDEAIKLIEKAISIDKSCM 314
           L  Q DF GAE  F ++I ++P     Y+  A   L  +G   EAI   +KAIS+D    
Sbjct: 59  LYKQGDFKGAEVAFRKAIELEPNFVQAYIALAN-TLDDQGKPQEAIAHYKKAISLDPHDS 117

Query: 315 FAYETLGTIEVQRGRLEEAVKCFNKALPLARDEAELSHIYSLRDAAIAQMKVCERYNIKK 374
            AY  LG    +  +LE A+  + KAL L  + A+ +H Y+L +A   Q K+ E      
Sbjct: 118 GAYFNLGLTLARLNQLEPAIAQYKKALSLEPNYAD-AH-YNLGNALYTQGKLTE------ 169

Query: 375 KVSPRSQNITKNEKLAIKQLRENNDIIIR-----PADKGGKTVVMDK----ADYTQKMTS 425
            V+  +  I      A    R  N +  R        +  K++  D     A Y      
Sbjct: 170 AVTEYTAAIRLKPSYAPTYTRLGNALYDRGELAEAVTQYKKSISFDPKYADAHYYLGNAL 229

Query: 426 ILNSNDYEIIPGDPTKTIEESEKYGNLENESGQK-HAASDFTKAFADLDEAEKVDPNVAD 484
                  E I  + T  I  S K     N  G   +A     +A A   +A  ++PN AD
Sbjct: 230 YAQGKSAEAI-AEYTAAIRLSPKNPAGYNALGNTLYAQGKLEEAIAQYKQALNLEPNYAD 288

Query: 485 SYYQRGQIYCLFGQYEEALRNLDKTIALNP 514
           ++Y     +   G+  EA+ +  + I ++P
Sbjct: 289 AHYNLASAFYAQGKLTEAITDYTEAIRIDP 318



 Score = 54.7 bits (130), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 55/190 (28%), Positives = 85/190 (44%), Gaps = 17/190 (8%)

Query: 167 DPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQRHFVVHKMIVPGDRE- 225
           DP  AD++Y  G      G+  EA+      I L+P      A  + + + +   G  E 
Sbjct: 215 DPKYADAHYYLGNALYAQGKSAEAIAEYTAAIRLSPK---NPAGYNALGNTLYAQGKLEE 271

Query: 226 ---RVEQSLKEFRNFVDTHSNVVEACTLFAQVLVDQEDFDGAEEYFNRSIRVDPENASLY 282
              + +Q+L    N+ D H N+  A   +AQ  + +   D     +  +IR+DP++A  Y
Sbjct: 272 AIAQYKQALNLEPNYADAHYNL--ASAFYAQGKLTEAITD-----YTEAIRIDPKHAQAY 324

Query: 283 VHRAMLMLQARGNVDEAIKLIEKAISIDKSCMFAYETLGTIEVQRGRLEEAVKCFNKALP 342
              A  M   +G   EAI   +KAIS+  +  F Y  LG    +  +LEEA+    KA  
Sbjct: 325 TGLANAM-DDQGKPQEAIAHYKKAISLVPNDAFTYYNLGITLGREQQLEEAIVNLKKAKE 383

Query: 343 L--ARDEAEL 350
           L  A D  E+
Sbjct: 384 LFQAEDNKEM 393



 Score = 50.1 bits (118), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 40/186 (21%), Positives = 84/186 (45%), Gaps = 7/186 (3%)

Query: 156 AFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQRHFVV 215
           A A   +A  ++PN AD++Y  G      G+  EA+      I L P++     +    +
Sbjct: 136 AIAQYKKALSLEPNYADAHYNLGNALYTQGKLTEAVTEYTAAIRLKPSYAPTYTRLGNAL 195

Query: 216 HKMIVPGDRERVEQSLKEFRNFVDTHSNVVEACTLFAQVLVDQEDFDGAEEYFNRSIRVD 275
           +      DR  + +++ +++  +       +A       L  Q     A   +  +IR+ 
Sbjct: 196 Y------DRGELAEAVTQYKKSISFDPKYADAHYYLGNALYAQGKSAEAIAEYTAAIRLS 249

Query: 276 PENASLYVHRAMLMLQARGNVDEAIKLIEKAISIDKSCMFAYETLGTIEVQRGRLEEAVK 335
           P+N + Y       L A+G ++EAI   ++A++++ +   A+  L +    +G+L EA+ 
Sbjct: 250 PKNPAGYNALGN-TLYAQGKLEEAIAQYKQALNLEPNYADAHYNLASAFYAQGKLTEAIT 308

Query: 336 CFNKAL 341
            + +A+
Sbjct: 309 DYTEAI 314



 Score = 47.0 bits (110), Expect = 0.028,   Method: Compositional matrix adjust.
 Identities = 86/367 (23%), Positives = 148/367 (40%), Gaps = 46/367 (12%)

Query: 146 HLHAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFH 205
           +L+   DF  A     +A +++PN   +Y          G+ +EA+ +  K I+L+P+  
Sbjct: 58  NLYKQGDFKGAEVAFRKAIELEPNFVQAYIALANTLDDQGKPQEAIAHYKKAISLDPHDS 117

Query: 206 VARAQRHFVVHKMIVPGDRERVEQSLKEFRNFVDTHSNVVEACTLFAQVLVDQEDFDGAE 265
            A       + ++       ++E ++ +++  +    N  +A       L  Q     A 
Sbjct: 118 GAYFNLGLTLARL------NQLEPAIAQYKKALSLEPNYADAHYNLGNALYTQGKLTEAV 171

Query: 266 EYFNRSIRVDPENASLYVHRAMLMLQARGNVDEAIKLIEKAISIDKSCMFAYETLGTIEV 325
             +  +IR+ P  A  Y  R    L  RG + EA+   +K+IS D     A+  LG    
Sbjct: 172 TEYTAAIRLKPSYAPTYT-RLGNALYDRGELAEAVTQYKKSISFDPKYADAHYYLGNALY 230

Query: 326 QRGRLEEAVKCFNKALPLA-RDEAELSHIYSLRDAAIAQMKVCERYNIKKKVSPRSQNIT 384
            +G+  EA+  +  A+ L+ ++ A  +   +L +   AQ K+ E                
Sbjct: 231 AQGKSAEAIAEYTAAIRLSPKNPAGYN---ALGNTLYAQGKLEE---------------- 271

Query: 385 KNEKLAIKQLRENNDIIIRPADKGGKTVVMDKADYTQ-KMTSILNSNDY-EIIPGDPTKT 442
                AI Q ++  ++    AD       +  A Y Q K+T  +   DY E I  DP   
Sbjct: 272 -----AIAQYKQALNLEPNYADA---HYNLASAFYAQGKLTEAIT--DYTEAIRIDP--- 318

Query: 443 IEESEKYGNLENESGQKHAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEA 502
            + ++ Y  L N    +    +   A A   +A  + PN A +YY  G       Q EEA
Sbjct: 319 -KHAQAYTGLANAMDDQGKPQE---AIAHYKKAISLVPNDAFTYYNLGITLGREQQLEEA 374

Query: 503 LRNLDKT 509
           + NL K 
Sbjct: 375 IVNLKKA 381


>gi|340504470|gb|EGR30909.1| tpr repeat protein [Ichthyophthirius multifiliis]
          Length = 1212

 Score = 62.8 bits (151), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 80/388 (20%), Positives = 170/388 (43%), Gaps = 63/388 (16%)

Query: 137 NAHIKRAVVHLHAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDK 196
           NA+  +  + +    +  +AF   ++A K++P+  ++Y  RG I     +Y+EA+ +   
Sbjct: 202 NAYFNKGNILISFQKN-VEAFIQFEKAIKINPHFFEAYNNRGNILFYQKKYQEAIDSYQF 260

Query: 197 TIALNPNFHVARAQRHFVVHKMIVPGDRERVEQSLKEFRNFVDTHSNVVEACTLFAQVLV 256
            I +NPNF  A   +   V+K++V     + E+++  +   +  + N   A     ++L 
Sbjct: 261 CIQINPNFPNAYFNQG-NVYKILV-----QYEKAIFCYNKCITLNPNDTSAYYKKGKILN 314

Query: 257 DQEDFDGAEEYFNRSIRVDPENASLYVHRAMLMLQARGNVDEAIKLIEKAISIDKSCMFA 316
             + ++ A  Y +++I ++P     Y  +A ++   R   D+A+ ++EK I +DK  +  
Sbjct: 315 LLKKYEDAILYLDKAISLNPYFIKAYKIKAEVLKNQRK-YDDALIILEKVIEVDKQNLKY 373

Query: 317 YETLGTIEVQRGRLEEAVKCFNKALPLARDEAELSHIYSLRDAAIAQMKVCERYNIKKKV 376
               G + ++  + + ++ CF K L           IY L++            NI + +
Sbjct: 374 LIKQGQLLMKLKQYQNSIDCFEKIL----------QIYPLQE------------NIFQYI 411

Query: 377 SPRSQNITKNEK--LAIKQLRENNDI--------IIRPADKGGKTVVMDKADYTQKMTSI 426
                 + K EK     +++ +N D         I++  +K  K +     +Y +K   +
Sbjct: 412 GKNYYYLEKYEKALFYFEKIVDNKDFDIFFFIGNILKKLEKFEKAI-----EYYEK-AQL 465

Query: 427 LNSNDYEIIPGDPTKTIEESEKYGNLENESGQKHAASDFTKAFADLDEAEKVDPNVADSY 486
           +N NDY I        +++ + Y  L            F +A +  D+A +++    D +
Sbjct: 466 INQNDYYI-------YLQKGDCYFFL----------GKFLEAISCYDQAIQINEIFQDPF 508

Query: 487 YQRGQIYCLFGQYEEALRNLDKTIALNP 514
           + +G  +     + EA++   K I +NP
Sbjct: 509 FNKGNAFYYLQNFSEAIKCYQKVIEINP 536



 Score = 60.1 bits (144), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 63/284 (22%), Positives = 122/284 (42%), Gaps = 41/284 (14%)

Query: 252 AQVLVDQEDFDGAEEYFNRSIRVDPENASLYVHRAMLMLQARGNVDEAIKLIEKAISIDK 311
             + ++ +++  A  YF +S+ ++  N+  Y+    + L      +EAIK  EKA   D 
Sbjct: 75  GNIFIEIQEYKQAILYFKKSLEINQNNSYAYISIGNI-LNTLNKFNEAIKFYEKA---DP 130

Query: 312 SCMFAYETLGTIEVQRGRLEEAVKCFNKALPLARDEAELSHIYSLRDAAIAQMKV----C 367
                 +  G I +   + EEA KCF++A+ L + + E    Y  +  ++ ++K+     
Sbjct: 131 QNCLVQKNKGNIFMNLRKYEEANKCFDQAILLDKQDFEC---YYNKGNSLTKLKMYKEAI 187

Query: 368 ERYNIKKKVSPRSQNITKNEKLAIKQLRENNDIIIR-------------PADKGGKTVVM 414
           + Y    +++P   N   N+   +   ++N +  I+               +  G  +  
Sbjct: 188 QYYEKAIEINPNYSNAYFNKGNILISFQKNVEAFIQFEKAIKINPHFFEAYNNRGNILF- 246

Query: 415 DKADYTQKMTSILNSNDY--EIIPGDPTKTIEESEKYGNLENESGQKHAASDFTKAFADL 472
               Y +K    ++S  +  +I P  P     +   Y  L            + KA    
Sbjct: 247 ----YQKKYQEAIDSYQFCIQINPNFPNAYFNQGNVYKIL----------VQYEKAIFCY 292

Query: 473 DEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNF 516
           ++   ++PN   +YY++G+I  L  +YE+A+  LDK I+LNP F
Sbjct: 293 NKCITLNPNDTSAYYKKGKILNLLKKYEDAILYLDKAISLNPYF 336



 Score = 58.5 bits (140), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 56/268 (20%), Positives = 123/268 (45%), Gaps = 36/268 (13%)

Query: 104 RATVYIFTSQSTKAIEDLTQLVEDTSVDPKIKVNAHIKRAVVHLHAASDFTKAFADLDEA 163
           R  +  +  +  +AI+     ++   ++P    NA+  +  V+      + KA    ++ 
Sbjct: 241 RGNILFYQKKYQEAIDSYQFCIQ---INPNFP-NAYFNQGNVY-KILVQYEKAIFCYNKC 295

Query: 164 EKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNF--------HVARAQRHF-- 213
             ++PN   +YY++G+I  L  +YE+A+  LDK I+LNP F         V + QR +  
Sbjct: 296 ITLNPNDTSAYYKKGKILNLLKKYEDAILYLDKAISLNPYFIKAYKIKAEVLKNQRKYDD 355

Query: 214 --VVHKMIVPGDRERVE---------QSLKEFRNFVDTHSNVVEACTLFAQVL------- 255
             ++ + ++  D++ ++           LK+++N +D    +++   L   +        
Sbjct: 356 ALIILEKVIEVDKQNLKYLIKQGQLLMKLKQYQNSIDCFEKILQIYPLQENIFQYIGKNY 415

Query: 256 VDQEDFDGAEEYFNRSIRVDPENASLYVHRAMLMLQARGNVDEAIKLIEKAISIDKSCMF 315
              E ++ A  YF +   VD ++  ++     + L+     ++AI+  EKA  I+++  +
Sbjct: 416 YYLEKYEKALFYFEKI--VDNKDFDIFFFIGNI-LKKLEKFEKAIEYYEKAQLINQNDYY 472

Query: 316 AYETLGTIEVQRGRLEEAVKCFNKALPL 343
            Y   G      G+  EA+ C+++A+ +
Sbjct: 473 IYLQKGDCYFFLGKFLEAISCYDQAIQI 500



 Score = 54.3 bits (129), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 48/255 (18%), Positives = 118/255 (46%), Gaps = 12/255 (4%)

Query: 89   ESTSSNHTKALARLLRATVYIFTSQSTKAIEDLTQLVEDTSVDPKIKVNAHIKRAVVHLH 148
            E+   N +   A   R   +    +  +AI+   +++E   ++P   + A+I +      
Sbjct: 804  ETIQFNQSFLEAYFYRGVAFFNIQKYDEAIDSFQKVIE---INPDY-LEAYIYKGN-SFK 858

Query: 149  AASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVAR 208
                +  +    +EA   +P    +Y+ +G I     QY+E++   ++ ++ N    +  
Sbjct: 859  KLQKYECSLLCYEEALSKNPEYEIAYFNKGNILIHLQQYQESIFCFEQILSKN----IKH 914

Query: 209  AQRHFVVHKMIVPGDRERVEQSLKEFRNFVDTHSNVVEACTLFAQVLVDQEDFDGAEEYF 268
            A+ H+   K I   ++++ +++++ F   ++ +    +A       L + +++  A + +
Sbjct: 915  AEAHY--QKGIALKEQKKFKEAIESFEKAIEINEKYYQAYNNQGIALTEIQEYQKAMKCY 972

Query: 269  NRSIRVDPENASLYVHRAMLMLQARGNVDEAIKLIEKAISIDKSCMFAYETLGTIEVQRG 328
             ++I+++   A  Y ++ +++       D AIK  +KAI I+     AY  +GT    + 
Sbjct: 973  EKAIKINKNYAEAYNNKGIILFFLNEFTD-AIKCYQKAIKINSEFSEAYSNIGTALNFQE 1031

Query: 329  RLEEAVKCFNKALPL 343
            + ++A+ CF KA+ +
Sbjct: 1032 KYQDAIPCFLKAISI 1046



 Score = 51.6 bits (122), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 47/219 (21%), Positives = 102/219 (46%), Gaps = 13/219 (5%)

Query: 138  AHIKRAVVHLHAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKT 197
            A+  R V   +    + +A     +  +++P+  ++Y  +G  +    +YE +L   ++ 
Sbjct: 815  AYFYRGVAFFNI-QKYDEAIDSFQKVIEINPDYLEAYIYKGNSFKKLQKYECSLLCYEEA 873

Query: 198  IALNPNFHVARAQR-HFVVHKMIVPGDRERVEQSLKEFRNFVDTHSNVVEACTLFAQVLV 256
            ++ NP + +A   + + ++H        ++ ++S+  F   +  +    EA       L 
Sbjct: 874  LSKNPEYEIAYFNKGNILIH-------LQQYQESIFCFEQILSKNIKHAEAHYQKGIALK 926

Query: 257  DQEDFDGAEEYFNRSIRVDPENASLYVHRAMLMLQARGNVDEAIKLIEKAISIDKSCMFA 316
            +Q+ F  A E F ++I ++ +    Y ++ + + + +    +A+K  EKAI I+K+   A
Sbjct: 927  EQKKFKEAIESFEKAIEINEKYYQAYNNQGIALTEIQE-YQKAMKCYEKAIKINKNYAEA 985

Query: 317  YETLGTIEVQRGRLEEAVKCFNKALPLARDEAELSHIYS 355
            Y   G I        +A+KC+ KA+ +    +E S  YS
Sbjct: 986  YNNKGIILFFLNEFTDAIKCYQKAIKI---NSEFSEAYS 1021



 Score = 51.2 bits (121), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 96/455 (21%), Positives = 182/455 (40%), Gaps = 57/455 (12%)

Query: 72   FEHEDYLTAIRHCTEEIESTSSNHTKALARLLRATVYIFTSQSTKAIEDLTQLVEDTSVD 131
            F  ++Y  +I+   E I+  +S   +    + +A + I   Q  KAI    Q ++   +D
Sbjct: 619  FYLQNYQESIKCYEEIIQKRNSYLLQTFINVSKALIEI--QQYEKAISYFDQALK---ID 673

Query: 132  PKIKVNAHIKRAVVHLHAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCL--FGQYEE 189
             +  + A   + +  L+    F KA         ++PN   +Y  +G   CL    QY++
Sbjct: 674  -QYNIEAQFNKGIC-LNLIKKFEKASQCFQNIINMEPNNQKAYLNQG--ICLKNLFQYQQ 729

Query: 190  ALRNLDKTIALNPNFHVARAQRHFVVHKMIVPGDRERVEQSLKEFRNFVDTHSNVVEACT 249
            +L  L+K I LN N                             +F           +A  
Sbjct: 730  SLECLNKAILLNEN-----------------------------DF-----------QAIF 749

Query: 250  LFAQVLVDQEDFDGAEEYFNRSIRVDPENASLYVHRAMLMLQARGNVDEAIKLIEKAISI 309
            + A+VL + + +  A EY+ R++++D +N  ++    +          EAI   ++ I  
Sbjct: 750  IKAKVLNEIKQYQEAIEYYKRALKLDCKNYEVFYSLGISFYNLEQ-FQEAINYFDETIQF 808

Query: 310  DKSCMFAYETLGTIEVQRGRLEEAVKCFNKALPLARDEAELSHIYSLRDAAIAQMKVCER 369
            ++S + AY   G       + +EA+  F K + +  D  E ++IY        Q   C  
Sbjct: 809  NQSFLEAYFYRGVAFFNIQKYDEAIDSFQKVIEINPDYLE-AYIYKGNSFKKLQKYECSL 867

Query: 370  YNIKKKVS--PRSQNITKNEKLAIKQLRENNDIIIRPADKGGKTVVMDKADYTQKMTSIL 427
               ++ +S  P  +    N+   +  L++  + I        K +   +A Y QK  ++ 
Sbjct: 868  LCYEEALSKNPEYEIAYFNKGNILIHLQQYQESIFCFEQILSKNIKHAEAHY-QKGIALK 926

Query: 428  NSNDYEIIPGDPTKTIEESEKYGNLENESGQKHA-ASDFTKAFADLDEAEKVDPNVADSY 486
                ++       K IE +EKY    N  G       ++ KA    ++A K++ N A++Y
Sbjct: 927  EQKKFKEAIESFEKAIEINEKYYQAYNNQGIALTEIQEYQKAMKCYEKAIKINKNYAEAY 986

Query: 487  YQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARA 521
              +G I     ++ +A++   K I +N  F  A +
Sbjct: 987  NNKGIILFFLNEFTDAIKCYQKAIKINSEFSEAYS 1021



 Score = 46.6 bits (109), Expect = 0.034,   Method: Compositional matrix adjust.
 Identities = 58/230 (25%), Positives = 103/230 (44%), Gaps = 21/230 (9%)

Query: 298 EAIKLIEKAISIDKSC---MFAYETLGTIEVQRGRLEEAVKCFNKALPLARDEAELSHIY 354
           E I+  EK + I+++     F Y  +G I ++    ++A+  F K+L + ++    S+ Y
Sbjct: 49  EVIQYQEKILQINENSDNNFFIYNKVGNIFIEIQEYKQAILYFKKSLEINQNN---SYAY 105

Query: 355 -SLRDAAIAQMKVCERYNIKKKVSPRSQNITKNEKLAIKQLRENNDIIIRPADKG-GKTV 412
            S+ +      K  E     +K  P++  + KN+      LR+        A+K   + +
Sbjct: 106 ISIGNILNTLNKFNEAIKFYEKADPQNCLVQKNKGNIFMNLRK-----YEEANKCFDQAI 160

Query: 413 VMDKAD---YTQKMTSILNSNDYEIIPGDPTKTIEESEKYGNLENESGQKHAASDFTK-- 467
           ++DK D   Y  K  S+     Y+       K IE +  Y N     G  +    F K  
Sbjct: 161 LLDKQDFECYYNKGNSLTKLKMYKEAIQYYEKAIEINPNYSNAYFNKG--NILISFQKNV 218

Query: 468 -AFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNF 516
            AF   ++A K++P+  ++Y  RG I     +Y+EA+ +    I +NPNF
Sbjct: 219 EAFIQFEKAIKINPHFFEAYNNRGNILFYQKKYQEAIDSYQFCIQINPNF 268



 Score = 46.2 bits (108), Expect = 0.043,   Method: Compositional matrix adjust.
 Identities = 92/391 (23%), Positives = 162/391 (41%), Gaps = 74/391 (18%)

Query: 160 LDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQRHFVVHKMI 219
            D+A  +D    + YY +G        Y+EA++  +K I +NPN+  A   +       I
Sbjct: 156 FDQAILLDKQDFECYYNKGNSLTKLKMYKEAIQYYEKAIEINPNYSNAYFNKG-----NI 210

Query: 220 VPGDRERVEQSLKEFRNFVDTHSNVVEACTLFAQVLVDQEDFDGAEEYFNRSIRVDPENA 279
           +   ++ VE +  +F   +  + +  EA      +L  Q+ +  A + +   I+++P   
Sbjct: 211 LISFQKNVE-AFIQFEKAIKINPHFFEAYNNRGNILFYQKKYQEAIDSYQFCIQINPNFP 269

Query: 280 SLYVHRAMLMLQARGNVDEAIKLIEKAISIDKSCMF-------AYETLGTIEVQRGRLEE 332
           + Y +        +GNV + +   EKAI     C+        AY   G I     + E+
Sbjct: 270 NAYFN--------QGNVYKILVQYEKAIFCYNKCITLNPNDTSAYYKKGKILNLLKKYED 321

Query: 333 AVKCFNKALPL-------ARDEAE-LSHIYSLRDAAIAQMKVCE------RYNIKK---- 374
           A+   +KA+ L        + +AE L +     DA I   KV E      +Y IK+    
Sbjct: 322 AILYLDKAISLNPYFIKAYKIKAEVLKNQRKYDDALIILEKVIEVDKQNLKYLIKQGQLL 381

Query: 375 -KVSPRSQNITKNEK-LAIKQLRENNDIIIRPADKGGKTVVMDKAD----YTQKMTSILN 428
            K+     +I   EK L I  L+EN   I +    G     ++K +    Y +K   I++
Sbjct: 382 MKLKQYQNSIDCFEKILQIYPLQEN---IFQYI--GKNYYYLEKYEKALFYFEK---IVD 433

Query: 429 SNDYEI--IPGDPTKTIEESEKYGNLENESGQKHAASDFTKAFADLDEAEKVDPNVADSY 486
           + D++I    G+  K +E+                   F KA    ++A+ ++ N    Y
Sbjct: 434 NKDFDIFFFIGNILKKLEK-------------------FEKAIEYYEKAQLINQNDYYIY 474

Query: 487 YQRGQIYCLFGQYEEALRNLDKTIALNPNFH 517
            Q+G  Y   G++ EA+   D+ I +N  F 
Sbjct: 475 LQKGDCYFFLGKFLEAISCYDQAIQINEIFQ 505


>gi|226310316|ref|YP_002770210.1| hypothetical protein BBR47_07290 [Brevibacillus brevis NBRC 100599]
 gi|226093264|dbj|BAH41706.1| hypothetical protein [Brevibacillus brevis NBRC 100599]
          Length = 731

 Score = 62.8 bits (151), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 44/198 (22%), Positives = 94/198 (47%), Gaps = 7/198 (3%)

Query: 149 AASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVAR 208
           A   F +A     +  ++D N  + Y+ RG +Y   G+ +EA+ + ++ I L+P F    
Sbjct: 456 ALKRFEEAAETFSQVIQIDSNYPEYYFDRGNLYSRMGRLDEAIEDYNQAIKLSPPFPEVY 515

Query: 209 AQRHFVVHKMIVPGDRERVEQSLKEFRNFVDTHSNVVEACTLFAQVLVDQEDFDGAEEYF 268
             R    +++   GD   VE+++ ++   +D     ++     A +L   E F+ A +  
Sbjct: 516 FNRATAFNRL---GD---VEKAMADYDYLLDIDPENLDGLLNRATLLYQVEKFEMARKDA 569

Query: 269 NRSIRVDPENASLYVHRAMLMLQARGNVDEAIKLIEKAISIDKSCMFAYETLGTIEVQRG 328
              + ++P++A L     ++ + + GN D+A+K    A++ DK  M A+     +  + G
Sbjct: 570 EFGLEIEPDHARLLCTLGLIEM-SDGNNDQALKTFTAALNKDKEMMAAWTNRAVLYYEMG 628

Query: 329 RLEEAVKCFNKALPLARD 346
             + A+    +A+ L ++
Sbjct: 629 EYDRAIADLTEAMALEKN 646


>gi|20093095|ref|NP_619170.1| hypothetical protein MA4306 [Methanosarcina acetivorans C2A]
 gi|19918428|gb|AAM07650.1| TPR-domain containing protein [Methanosarcina acetivorans C2A]
          Length = 1079

 Score = 62.8 bits (151), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 84/428 (19%), Positives = 168/428 (39%), Gaps = 89/428 (20%)

Query: 161 DEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQRHFVVHKMIV 220
           D+A +  P  + S+YQ+G  Y     Y EA+   +K+ +++        Q+     K+ +
Sbjct: 121 DKALESFPTSSWSWYQKGDEYIQTQNYVEAINCYEKSFSMDSYLSRVWFQKALASEKLGM 180

Query: 221 PGDRERVEQSLKEFRNFVDTHSNVVEACTLFAQVLVDQEDFDGAEEYFNRSIRVDPENAS 280
                  +++L  + + +   SNV +   +  +     E++D A   FN ++ + P++  
Sbjct: 181 E------QEALASYDSSIGLGSNVSKTLQMKGKAYTGLENYDEAMRCFNGALNITPDDFE 234

Query: 281 LYVHRAMLMLQARGNVDEAIKLIEKAISIDKSCMFAY----------------------- 317
           L+  +  +M    G+ + AI+  ++AIS++     A+                       
Sbjct: 235 LWTQKG-IMYDMSGDYEAAIQCYDEAISLNPDLTEAWYNKGVDLEGMGLYQEALTCYEFV 293

Query: 318 -----ETLGTIEV------QRGRLEEAVKCFNKALPLARDEAELSH-------IYSLRDA 359
                E L T++       Q GR EEA++C+ + L  + D+A+  +            DA
Sbjct: 294 LLSEPENLNTLQKKGFCLEQLGRNEEALQCYEEILTYSPDDADAWYSKGSVLNAMGDYDA 353

Query: 360 AIAQM-----------------KVCERYNIKKKVSPRSQNITKNEKLAIKQLRENNDIII 402
           AIA                    + E++N      P    + + +  A+K          
Sbjct: 354 AIACYDRALNPDAGIEVEEIGEALLEKFNAYDSALPGYSEVPEFKSSAVKIWY------- 406

Query: 403 RPADKGGKTVVMDKADYTQKMTSILNSNDYEIIPGDPTKTIEESEKYGNLENESGQKHAA 462
              DKG   +  DK +  +      +S    ++  +    +    K  +L+     + AA
Sbjct: 407 ---DKG---LAFDKLENYESALECYDS----VLETESGHAVVWYMKALDLDRLDRYEEAA 456

Query: 463 SDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQ 522
             + KA        K++   A  +Y++G     FGQY++A ++ DK + L+ N+ +A   
Sbjct: 457 GCYDKAL-------KLNSEYAKVWYRKGYDSSKFGQYKDAAKSFDKAVNLDDNYTLAWYG 509

Query: 523 RHFVWTST 530
           + F    T
Sbjct: 510 KAFALAKT 517



 Score = 62.0 bits (149), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 84/390 (21%), Positives = 168/390 (43%), Gaps = 56/390 (14%)

Query: 168 PNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQ------RHFVVHKMIVP 221
           P+ AD++Y +G +    G Y+ A+   D+  ALNP+  +   +        F  +   +P
Sbjct: 332 PDDADAWYSKGSVLNAMGDYDAAIACYDR--ALNPDAGIEVEEIGEALLEKFNAYDSALP 389

Query: 222 GDRERVE----------------QSLKEFRNFVDTHSNVVE-----ACTLFAQVL-VDQE 259
           G  E  E                  L+ + + ++ + +V+E     A   + + L +D+ 
Sbjct: 390 GYSEVPEFKSSAVKIWYDKGLAFDKLENYESALECYDSVLETESGHAVVWYMKALDLDRL 449

Query: 260 D-FDGAEEYFNRSIRVDPENASLYVHRAMLMLQARGNVDEAIKLIEKAISIDKSCMFAYE 318
           D ++ A   ++++++++ E A ++ +R        G   +A K  +KA+++D +   A+ 
Sbjct: 450 DRYEEAAGCYDKALKLNSEYAKVW-YRKGYDSSKFGQYKDAAKSFDKAVNLDDNYTLAWY 508

Query: 319 TLGTIEVQRGRLEEAVKCFNKALPLARDEAELSHIYSLRDAAIAQMKVCERYNIKKKVSP 378
                  + G  EEA+ C+ K L  A D AE   I+  +   + Q+   ER+        
Sbjct: 509 GKAFALAKTGDYEEALVCYEKVLAAAPDSAE---IWYNKGLLLDQL---ERHQEASDCYS 562

Query: 379 RSQNITKNEKLAIKQLRENNDII---IRP-ADKGGKTVVMDKADYTQKMTSILNSNDYEI 434
           ++  I     +A  +L +N + +   + P + +G KT V  K+  +    S L +  Y +
Sbjct: 563 KALQINPGYSVARFRLNKNTEELYGGLTPNSSEGKKTEVSPKSAISGGFWSYLLNYKYTL 622

Query: 435 IPGDPTKTIEESEKYGNLENESGQKHAASDFTKAFADL----------DEAEKVDPNVAD 484
                 ++ + SE + +L  E     A      A++ L          D A  ++P   +
Sbjct: 623 T----EESSDISENFDDLSPEFSYDAAWYGKASAYSKLNMHEDALDAYDTALSINPLRTE 678

Query: 485 SYYQRGQIYCLFGQYEEALRNLDKTIALNP 514
           ++Y++G      G+ EEAL    K + +NP
Sbjct: 679 AWYEKGSALDKLGRSEEALECYKKALEINP 708



 Score = 56.6 bits (135), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 87/418 (20%), Positives = 173/418 (41%), Gaps = 66/418 (15%)

Query: 108 YIFTSQSTKAIEDLTQLVEDTSVDPKI--KVNAHIKRAVVHLHAASDFTKAFADLDEAEK 165
           Y  T +S+   E+   L  + S D     K +A+ K   +++H   D   A+   D A  
Sbjct: 620 YTLTEESSDISENFDDLSPEFSYDAAWYGKASAYSK---LNMH--EDALDAY---DTALS 671

Query: 166 VDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQRHFVVHKMI-VPGDR 224
           ++P   +++Y++G      G+ EEAL    K + +NP       Q    ++ M  +    
Sbjct: 672 INPLRTEAWYEKGSALDKLGRSEEALECYKKALEINP-------QSSDALYGMASISNTL 724

Query: 225 ERVEQSLKEFRNFVDTHSNVVEACTLFAQVLVDQEDFDGAEEYFNRSIRVDPENASLYVH 284
            R E+++  +   +  +++  EA    +Q LV+   ++ A E FN  + ++ EN      
Sbjct: 725 GRSEEAIAYYDQLLAANASDPEALQGKSQALVNLGRYEEAVECFNPLLELESENIEALDG 784

Query: 285 RAMLMLQARGNVDEAIKLIEKAISIDKSCMFAYETLGTIEVQRGRLEEAVKCFNKALPLA 344
           RA   L   G  +EA++  ++ + ++ S   A     ++  + GR EEA   + + L + 
Sbjct: 785 RA-FSLTKSGRQEEALEDYDRILQLEPSNSKAMTEKASLFEELGRYEEAASTYGEILRIT 843

Query: 345 RDEAELSH-----IYSLRD--AAIAQMKVCERYNIKKKVSPRSQNITKNEKLAIKQLREN 397
            +  E+ +     + ++ D  AAIA    C  Y+    + P++ +   N+  A  ++ + 
Sbjct: 844 PENREIMYRQGKALEAMGDFEAAIA----C--YDQILALDPKNIDAINNKGFAYAKMEKY 897

Query: 398 NDIIIRPADKGGKTVVMDKADYTQKMTSILNSNDYEIIPGDPTKTIEESEKYGNLENESG 457
            + I               A Y + +         E  P + T              +  
Sbjct: 898 QEAI---------------ASYDKAI---------EYAPNNATAWY----------FKGC 923

Query: 458 QKHAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPN 515
              A S    A    D+   + P+   ++Y RG +Y + G+  E++ + +  +A+NPN
Sbjct: 924 ANFAISSNIAAVESFDKVVTLKPDCITAWYNRGYLYNVMGEVNESINSYNSALAINPN 981



 Score = 42.4 bits (98), Expect = 0.71,   Method: Compositional matrix adjust.
 Identities = 88/429 (20%), Positives = 161/429 (37%), Gaps = 108/429 (25%)

Query: 128 TSVDPKIKVNAHIKRAVVHL-----HAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYC 182
           T V PK  ++      +++        +SD ++ F DL      D     ++Y +   Y 
Sbjct: 599 TEVSPKSAISGGFWSYLLNYKYTLTEESSDISENFDDLSPEFSYDA----AWYGKASAYS 654

Query: 183 LFGQYEEALRNLDKTIALNPNFHVARAQRHFVVHKMIVPGDRERVEQSLKEFRNFVDTHS 242
               +E+AL   D  +++NP    A  ++   + K+       R E++L           
Sbjct: 655 KLNMHEDALDAYDTALSINPLRTEAWYEKGSALDKL------GRSEEAL----------- 697

Query: 243 NVVEACTLFAQVLVDQEDFDGAEEYFNRSIRVDPENASLYVHRAMLMLQARGNVDEAIKL 302
                                  E + +++ ++P+++      A +     G  +EAI  
Sbjct: 698 -----------------------ECYKKALEINPQSSDALYGMASIS-NTLGRSEEAIAY 733

Query: 303 IEKAISIDKSCMFAYETLGTIEVQRGRLEEAVKCFNKALPLARDEAELSHIYSLRDAAIA 362
            ++ ++ + S   A +      V  GR EEAV+CFN   PL   E+E             
Sbjct: 734 YDQLLAANASDPEALQGKSQALVNLGRYEEAVECFN---PLLELESE------------- 777

Query: 363 QMKVCERYNIKKKVSPRSQNITKNEKLAIKQLRENNDIIIRPADKGGKTVVMDKADYTQK 422
                   NI+  +  R+ ++TK+ +   ++  E+ D I++      K +       T+K
Sbjct: 778 --------NIEA-LDGRAFSLTKSGRQ--EEALEDYDRILQLEPSNSKAM-------TEK 819

Query: 423 MTSILNSNDYEIIPGDPTKTIEESEKYGNL-----EN------ESGQKHAASDFTKAFAD 471
            +       YE          E +  YG +     EN      +     A  DF  A A 
Sbjct: 820 ASLFEELGRYE----------EAASTYGEILRITPENREIMYRQGKALEAMGDFEAAIAC 869

Query: 472 LDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVA---RAQRHFVWT 528
            D+   +DP   D+   +G  Y    +Y+EA+ + DK I   PN   A   +   +F  +
Sbjct: 870 YDQILALDPKNIDAINNKGFAYAKMEKYQEAIASYDKAIEYAPNNATAWYFKGCANFAIS 929

Query: 529 STLAELMAF 537
           S +A + +F
Sbjct: 930 SNIAAVESF 938



 Score = 41.2 bits (95), Expect = 1.3,   Method: Compositional matrix adjust.
 Identities = 31/123 (25%), Positives = 56/123 (45%), Gaps = 25/123 (20%)

Query: 153 FTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQRH 212
           + +A    D+A K++   A  +Y++G     FGQY++A ++ DK + L+ N+ +A   + 
Sbjct: 452 YEEAAGCYDKALKLNSEYAKVWYRKGYDSSKFGQYKDAAKSFDKAVNLDDNYTLAWYGKA 511

Query: 213 FVVHKMIVPGDRERVEQSLKEFRNFVDTHSNVVEACTLFAQVLVDQEDFDGAEEYFNRSI 272
           F + K    GD E                    EA   + +VL      D AE ++N+ +
Sbjct: 512 FALAKT---GDYE--------------------EALVCYEKVLAAAP--DSAEIWYNKGL 546

Query: 273 RVD 275
            +D
Sbjct: 547 LLD 549


>gi|238062343|ref|ZP_04607052.1| tetratricopeptide TPR_2 [Micromonospora sp. ATCC 39149]
 gi|237884154|gb|EEP72982.1| tetratricopeptide TPR_2 [Micromonospora sp. ATCC 39149]
          Length = 730

 Score = 62.8 bits (151), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 46/189 (24%), Positives = 84/189 (44%), Gaps = 7/189 (3%)

Query: 155 KAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQRHFV 214
           +A AD +     DPN  D Y+ RG +    G+  EA+ +  +T+ L+P F    A  +  
Sbjct: 493 EALADYNFVIDADPNFPDHYFNRGNVLRRLGRNAEAIEDYQQTLLLSPPF--PEAYYNLA 550

Query: 215 VHKMIVPGDRERVEQSLKEFRNFVDTHSNVVEACTLFAQVLVDQEDFDGAEEYFNRSIRV 274
             ++    + +  E +L +    ++     V A    A +  D +D DGA       + +
Sbjct: 551 DARL----ELDDAEGALADLDRVLELDPEHVSAWVNRAGLRCDLDDLDGAWADVTAGLAI 606

Query: 275 DPENASLYVHRAMLMLQARGNVDEAIKLIEKAISIDKSCMFAYETLGTIEVQRGRLEEAV 334
           +P+NA L   R  ++ + RG  + A + +  A+ +D     A+   G +    G L  A+
Sbjct: 607 EPDNAHLLCLRGRVLAE-RGETEAAHQALTAALGVDAGLAEAWALRGGLRYGSGDLTTAI 665

Query: 335 KCFNKALPL 343
              ++AL L
Sbjct: 666 TDLDRALEL 674



 Score = 57.4 bits (137), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 46/183 (25%), Positives = 87/183 (47%), Gaps = 10/183 (5%)

Query: 175 YQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQRHFVVHKMIVPGDRERVEQSLKEF 234
           Y R Q+Y +FG+ EEAL + +  I  +PNF      R  V+ ++       R  ++++++
Sbjct: 479 YNRAQVYGMFGRLEEALADYNFVIDADPNFPDHYFNRGNVLRRL------GRNAEAIEDY 532

Query: 235 RNFVDTHSNVVEACTLFAQVLVDQEDFDGAEEYFNRSIRVDPENASLYVHRAMLMLQARG 294
           +  +       EA    A   ++ +D +GA    +R + +DPE+ S +V+RA L      
Sbjct: 533 QQTLLLSPPFPEAYYNLADARLELDDAEGALADLDRVLELDPEHVSAWVNRAGLRCDL-D 591

Query: 295 NVDEAIKLIEKAISIDKSCMFAYETLGTIEVQRGRLEEAVKCFNKALPLARDEAELSHIY 354
           ++D A   +   ++I+          G +  +RG  E A +    AL +   +A L+  +
Sbjct: 592 DLDGAWADVTAGLAIEPDNAHLLCLRGRVLAERGETEAAHQALTAALGV---DAGLAEAW 648

Query: 355 SLR 357
           +LR
Sbjct: 649 ALR 651


>gi|154151906|ref|YP_001405524.1| protein kinase [Methanoregula boonei 6A8]
 gi|154000458|gb|ABS56881.1| protein kinase [Methanoregula boonei 6A8]
          Length = 623

 Score = 62.8 bits (151), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 63/280 (22%), Positives = 119/280 (42%), Gaps = 38/280 (13%)

Query: 257 DQEDFDGAEEYFNRSIRVDPENASLYVHRAMLMLQARGNVDEAIKLIEKAISIDKSCMFA 316
           D   FD     F  SI ++PEN    V++   + +  G  DEA+    +A+ +  +    
Sbjct: 341 DSACFDEVVTAFECSILLEPENIQSLVNKGDFLAEL-GRFDEAVSAYARALELSPNDARV 399

Query: 317 YETLGTIEVQRGRLEEAVKCFNKALPLARDEAE--------LSHIYSLRDAAIAQMKVCE 368
           +   GT+  + GRL+EAV  +++ L L+  +A         L+ +  L +A  A  +  E
Sbjct: 400 WNNKGTLLARCGRLKEAVSAYSRGLELSPGDARAWNNKGVLLAELGRLEEAVTAYTRALE 459

Query: 369 RYNIKKKVSPRSQNITKNEKLAIKQLRENNDII--------IRPAD------KGGKTVVM 414
                  ++P    I  N+  A+ +L   ++ +        + P D       GG    +
Sbjct: 460 -------LAPADVKIWNNKGDALAELGRFDEAVSAFRHVCTVDPEDTDAWYSTGGSPAPL 512

Query: 415 DKADYTQKMTSILNSNDYEIIPGDPTKTIEESEKYGNLENESGQKHAASDFTKAFADLDE 474
            + +      + L +     +P + T    E+EK+   E ES  +     F +A +  D 
Sbjct: 513 GRFETALAFETPLPN-----LPRENTSRPREAEKW-YCEGESLARRG--KFEEAVSAYDH 564

Query: 475 AEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNP 514
           A  + P+ AD++  +G  Y + G+  +A+R   K + + P
Sbjct: 565 AITLKPDYADAWLNKGTAYGILGKDRDAVRCFGKFVQMAP 604


>gi|386813873|ref|ZP_10101097.1| conserved hypothetical protein [planctomycete KSU-1]
 gi|386403370|dbj|GAB63978.1| conserved hypothetical protein [planctomycete KSU-1]
          Length = 576

 Score = 62.8 bits (151), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 100/473 (21%), Positives = 191/473 (40%), Gaps = 71/473 (15%)

Query: 81  IRHCTEEIESTSSNHTKALARLLRATVYIFTSQSTKAI-----------------EDLTQ 123
           + H   +I   ++   +A+A LL A  Y   +Q+ +                   E LT 
Sbjct: 89  LHHYLGKIYYDNNKPDEAIAELLAAVSYYKITQTAEKADAYNDLGLAYKDKNAFSESLTA 148

Query: 124 LVEDTSVDPK-IKVNAHIKRAVVHLHAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYC 182
             E   ++P     N H+       +   D   +   L ++ K+D   AD+++  G +Y 
Sbjct: 149 FKESLELNPSATDTNYHVGLLYYKKNMLDD---SITYLKKSIKLDLKNADAHFTLGLVYY 205

Query: 183 LFGQYEEALRNLDKTIALNPNFHVARAQRHFVVHKMIVPGDRERVEQSLKEFRNFVDTHS 242
               Y++A     +TI LN     A      + ++    GD   +E+S+ E +  + +  
Sbjct: 206 TKSLYDKATSEFKQTIELNSKDAEAHNYLGLLYYQQ---GD---LEESIAEHKAALLSDQ 259

Query: 243 NVVEACTLFAQVLVDQEDFDGAEEYFNRSIRVDPENASLYVHRAMLMLQARGNVDEAIKL 302
           N  +A       L  + +   A + F +++ + P+ A  Y +   L+        +A+  
Sbjct: 260 NYPDAYNNLGIALYAKNNTKDAIDAFKKTLELQPDFAEAYFNLG-LIYSEENKTKDAVSS 318

Query: 303 IEKAISIDKSCMFAYETLGTIEVQRGRLEEAVKCFNKALPLARDEAELSHIYSLRDAAIA 362
           +E+AI ++     A+ TLG I  +    EEA+  + KA+    D AE  + Y+  +A   
Sbjct: 319 LEQAIKLNPKIAEAHFTLGEIYTKNDMQEEALSEYKKAIDSKPDYAEAYYNYAELNATKG 378

Query: 363 QMKVCERYNIKKKVSPRSQNITKNEKLAIKQLRENN-----DIIIRPADKGGKTVVMDKA 417
                      + ++  S+ I         +L  NN     ++ I   ++G     +DKA
Sbjct: 379 MHD--------RSIAAWSKTI---------ELNPNNTDAYFNLGIAYYNQGD----LDKA 417

Query: 418 DYTQKMTSILNSNDYEII---------PGDPTKTIEESEK-------YGNLENESGQKHA 461
                    +N NDY+ +          G   KTI+  EK       +  L  + G  +A
Sbjct: 418 ISLWIKVIEINPNDYDALINLADAYNAKGLLDKTIQTWEKITEVYPNHAGLYYKLGNAYA 477

Query: 462 ASD-FTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALN 513
             + +  A    ++A ++DPN+ ++YY  G  Y   G++++A+    K + +N
Sbjct: 478 KKNMYNTALVQWEKAIEIDPNLVNAYYNLGLTYQKIGKWDDAIEAYKKVLDIN 530


>gi|196006523|ref|XP_002113128.1| hypothetical protein TRIADDRAFT_56980 [Trichoplax adhaerens]
 gi|190585169|gb|EDV25238.1| hypothetical protein TRIADDRAFT_56980 [Trichoplax adhaerens]
          Length = 1707

 Score = 62.8 bits (151), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 88/378 (23%), Positives = 161/378 (42%), Gaps = 52/378 (13%)

Query: 173  SYYQRGQIYCLFGQYEEALRNLDKTIALN--------PNF-----HVARAQRHFVVHKMI 219
            +Y + GQ+Y   G+Y+EAL  L+K++ +N        PN      ++AR   H   +   
Sbjct: 1112 TYEKIGQVYHCQGKYDEALSMLNKSLKVNLTRLANNHPNIVNLHNNIARVYNHQAKYDDA 1171

Query: 220  VPGDRERVEQSLK-EFRNFVDTHSNVVEACTLFAQVLVDQEDFDGAEEYFNRSIRV---- 274
            +        +SLK       D H  +        QV  DQ  +D A   FN+S+++    
Sbjct: 1172 L----SIFNKSLKFTLTRLGDNHPKIAAIYRDIGQVYNDQGKYDDALSVFNKSLKIVLTK 1227

Query: 275  ----DPENASLYVHRAMLMLQARGNVDEAIKLIEKAISIDKSCM--------FAYETLGT 322
                 P  AS Y +   +    RG  D+A+ +  K++ I  S +         +Y  +G 
Sbjct: 1228 VNDNHPSVASTYDNIGHVY-NKRGKYDDALSVFNKSLKIKLSRLGDNHPRIAISYSNIGQ 1286

Query: 323  IEVQRGRLEEAVKCFNKALPLARDEAELSHIYSLRDAAIAQM--KVCERYNIKKKVSPRS 380
            +   +G+ +EA+  FNK+L +   +   +H       +IA    K+ + YN + K     
Sbjct: 1287 VYSDQGKFDEALSMFNKSLKITIKQLGDNH------PSIANTYNKIGQVYNHQGKYDDAL 1340

Query: 381  QNITKNEKLAIKQLRENNDIIIRPADKGGKTVVMDKADYTQKMTSILNSNDYEIIP-GDP 439
                K+ K+ + +L +N+  I       G+ V  ++  Y   ++    S    +   GD 
Sbjct: 1341 SIHNKSLKITLTRLGDNHPNIANTYCDIGQ-VYNNQGKYDDALSVYNKSLKITLTKLGDN 1399

Query: 440  TKTIEESEKYGNL----ENESGQKHAASDFTKAFA-DLDEAEKVDPNVADSYYQRGQIYC 494
              +I  +  Y N+     N+     A S + K+    L       P++A +Y   G++Y 
Sbjct: 1400 HPSIANT--YDNIGQVYNNQDKYDDALSVYYKSLKIKLTRLGDNHPSIAITYNNIGKVYS 1457

Query: 495  LFGQYEEALRNLDKTIAL 512
              G+++EAL  L+K++ +
Sbjct: 1458 DQGKFDEALSMLNKSLKI 1475



 Score = 53.1 bits (126), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 99/434 (22%), Positives = 181/434 (41%), Gaps = 59/434 (13%)

Query: 120  DLTQLVEDTSVDPKIKVNAHIKRAVVHLHAA------SDFTKAFA-DLDEAEKVDPNVAD 172
            +LT+L  +    P I VN H   A V+ H A      S F K+    L       P +A 
Sbjct: 1140 NLTRLANN---HPNI-VNLHNNIARVYNHQAKYDDALSIFNKSLKFTLTRLGDNHPKIAA 1195

Query: 173  SYYQRGQIYCLFGQYEEALRNLDKTIAL-----NPNFHVARAQRHFVVHKMIVPGDRERV 227
             Y   GQ+Y   G+Y++AL   +K++ +     N N     +    + H   V   R + 
Sbjct: 1196 IYRDIGQVYNDQGKYDDALSVFNKSLKIVLTKVNDNHPSVASTYDNIGH---VYNKRGKY 1252

Query: 228  EQSLKEFRNFV--------DTHSNVVEACTLFAQVLVDQEDFDGAEEYFNRSIRVD---- 275
            + +L  F   +        D H  +  + +   QV  DQ  FD A   FN+S+++     
Sbjct: 1253 DDALSVFNKSLKIKLSRLGDNHPRIAISYSNIGQVYSDQGKFDEALSMFNKSLKITIKQL 1312

Query: 276  ----PENASLYVHRAMLMLQARGNVDEAIKLIEKAISIDKSCMF--------AYETLGTI 323
                P  A+ Y ++   +   +G  D+A+ +  K++ I  + +          Y  +G +
Sbjct: 1313 GDNHPSIANTY-NKIGQVYNHQGKYDDALSIHNKSLKITLTRLGDNHPNIANTYCDIGQV 1371

Query: 324  EVQRGRLEEAVKCFNKALPLARDEAELSHIYSLRDAAIAQM--KVCERYNIKKKVSPRSQ 381
               +G+ ++A+  +NK+L +   +   +H       +IA     + + YN + K      
Sbjct: 1372 YNNQGKYDDALSVYNKSLKITLTKLGDNH------PSIANTYDNIGQVYNNQDKYDDALS 1425

Query: 382  NITKNEKLAIKQLRENNDIIIRPADKGGKTVVMDKADYTQKMTSILNSNDYEIIP-GD-- 438
               K+ K+ + +L +N+  I    +  GK V  D+  + + ++ +  S    ++  GD  
Sbjct: 1426 VYYKSLKIKLTRLGDNHPSIAITYNNIGK-VYSDQGKFDEALSMLNKSLKIRLVQLGDNH 1484

Query: 439  PTKTIEESEKYGNLENESGQ-KHAASDFTKAF-ADLDEAEKVDPNVADSYYQRGQIYCLF 496
            P+ +I  S+  G + N  G+   A S F K+    L    +  P  A  Y  +  +YC  
Sbjct: 1485 PSISITYSD-IGKVYNRQGKYDDALSMFKKSLQVSLVTLGENHPQTARFYRNQAAVYCKQ 1543

Query: 497  GQYEEALRNLDKTI 510
              Y +A+    K+I
Sbjct: 1544 SNYRQAISFYRKSI 1557



 Score = 48.1 bits (113), Expect = 0.013,   Method: Compositional matrix adjust.
 Identities = 84/398 (21%), Positives = 170/398 (42%), Gaps = 49/398 (12%)

Query: 168 PNVADSYYQRGQIYCLFGQYEEALRNLDKTIA-----LNPNFHVARAQRHFVVHKMIVPG 222
           P++++ Y + GQ+YC  G+Y++AL   +K++      L+ N H + A  +  + +  V  
Sbjct: 601 PSISNIYDKIGQVYCHQGKYDDALSMFNKSLKTQLTQLDEN-HPSIAITYSNIGQ--VYN 657

Query: 223 DRERVEQSLKEFR--------NFVDTHSNVVEACTLFAQVLVDQEDFDGAEEYFNRSIRV 274
           D+ +  ++L               + H ++        QV  +Q  +D A    N+S+++
Sbjct: 658 DQGKYNKALSMLNKSLKITITKLSNNHPSIANTYNNIGQVYNNQGKYDDALSIHNKSLKI 717

Query: 275 D--------PENASLYVHRAMLMLQARGNVDEAIKLIEKAISID--------KSCMFAYE 318
                    P  A+ Y     +    +G  D+A+ +  K++ I          S    Y+
Sbjct: 718 TLTRLSGNHPNIANTYRDIGQVY-NNQGKYDDALSVYNKSLKITLTKLGDNHPSIANTYD 776

Query: 319 TLGTIEVQRGRLEEAVKCFNKALPLARDEAELSHIYSLRDAAIAQMKVCERYNIKKKVSP 378
            +G +   + + ++A+  + K+L +       +H       AI    + + Y+ + K   
Sbjct: 777 NIGQVYNNQDKYDDALSVYYKSLKIKLTRLGDNH----PSIAITYNNIGKVYSDQGKYDE 832

Query: 379 RSQNITKNEKLAIKQLRENNDIIIRPADKGGKTVVMDKADYTQKMTSILNSNDYEIIP-G 437
               + K+ K+ + QL +N+  I    +   + V   +  Y   ++    S   ++   G
Sbjct: 833 ALPMLNKSLKIRLVQLGDNHPSITDTYNNIAR-VYKSQGKYDNALSVHNKSLKIQLTQLG 891

Query: 438 D--PTKTIEESEKYGNLE-NESGQKHAASDFTKAFA-DLDEAEKVDPNVADSYYQRGQIY 493
           D  P+  I  +   GN+  + S Q  A S + K+   +L +  +  P++AD+Y   GQI 
Sbjct: 892 DNHPSTAITYN-GIGNVYVSLSKQDDALSVYKKSLKIELAQLGENHPHIADAYNNIGQIN 950

Query: 494 CLFGQYEEALRNLDKTIALNPNFHVAR-AQRHFVWTST 530
              G Y+ AL  L+K++ +    H+ R    H   T+T
Sbjct: 951 IFQGNYDNALLMLNKSLKI----HLTRYGDNHLGITNT 984



 Score = 45.1 bits (105), Expect = 0.11,   Method: Compositional matrix adjust.
 Identities = 47/224 (20%), Positives = 95/224 (42%), Gaps = 32/224 (14%)

Query: 149 AASDFTKAF-ADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALN----PN 203
           A S F K+    L + ++  P++A +Y   GQ+Y   G+Y +AL  L+K++ +      N
Sbjct: 623 ALSMFNKSLKTQLTQLDENHPSIAITYSNIGQVYNDQGKYNKALSMLNKSLKITITKLSN 682

Query: 204 FHVARAQRHFVVHKMIVPGDRERVEQSLK--------EFRNFVDTHSNVVEACTLFAQVL 255
            H + A  +  + +  V  ++ + + +L                 H N+        QV 
Sbjct: 683 NHPSIANTYNNIGQ--VYNNQGKYDDALSIHNKSLKITLTRLSGNHPNIANTYRDIGQVY 740

Query: 256 VDQEDFDGAEEYFNRSIRVD--------PENASLYVHRAMLMLQARGNVDEAIKLIEKAI 307
            +Q  +D A   +N+S+++         P  A+ Y +   +    +   D+A+ +  K++
Sbjct: 741 NNQGKYDDALSVYNKSLKITLTKLGDNHPSIANTYDNIGQVY-NNQDKYDDALSVYYKSL 799

Query: 308 SID--------KSCMFAYETLGTIEVQRGRLEEAVKCFNKALPL 343
            I          S    Y  +G +   +G+ +EA+   NK+L +
Sbjct: 800 KIKLTRLGDNHPSIAITYNNIGKVYSDQGKYDEALPMLNKSLKI 843



 Score = 44.3 bits (103), Expect = 0.17,   Method: Compositional matrix adjust.
 Identities = 57/276 (20%), Positives = 113/276 (40%), Gaps = 40/276 (14%)

Query: 234 FRNFVDTHSNVVEACTLFAQVLVDQEDFDGAEEYFNRSIRVDPENASLYVHRAMLMLQAR 293
            +   D H  +  A     Q+  DQ  +D A   +N+S+++D                  
Sbjct: 551 LKQLYDYHPRITNAYRHVGQLYDDQGKYDDALSVYNKSLQID------------------ 592

Query: 294 GNVDEAIKLIEKAISIDKSCMFAYETLGTIEVQRGRLEEAVKCFNKALPLARDEAELSHI 353
                 IKL +   SI       Y+ +G +   +G+ ++A+  FNK+L     + + +H 
Sbjct: 593 -----LIKLGDNHPSISN----IYDKIGQVYCHQGKYDDALSMFNKSLKTQLTQLDENH- 642

Query: 354 YSLRDAAIAQMKVCERYNIKKKVSPRSQNITKNEKLAIKQLRENNDIIIRPADKGGKTVV 413
                 AI    + + YN + K +     + K+ K+ I +L  N+  I    +  G+ V 
Sbjct: 643 ---PSIAITYSNIGQVYNDQGKYNKALSMLNKSLKITITKLSNNHPSIANTYNNIGQ-VY 698

Query: 414 MDKADYTQKMTSILNSNDYEI----IPGDPTKTIEESEKYGNLENESGQ-KHAASDFTKA 468
            ++  Y   ++  +++   +I    + G+           G + N  G+   A S + K+
Sbjct: 699 NNQGKYDDALS--IHNKSLKITLTRLSGNHPNIANTYRDIGQVYNNQGKYDDALSVYNKS 756

Query: 469 FA-DLDEAEKVDPNVADSYYQRGQIYCLFGQYEEAL 503
               L +     P++A++Y   GQ+Y    +Y++AL
Sbjct: 757 LKITLTKLGDNHPSIANTYDNIGQVYNNQDKYDDAL 792



 Score = 43.5 bits (101), Expect = 0.27,   Method: Compositional matrix adjust.
 Identities = 77/370 (20%), Positives = 152/370 (41%), Gaps = 64/370 (17%)

Query: 168  PNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQRHFVVHKMIVPGDRERV 227
            P++A +Y   G++Y   G+Y+EAL  L+K++ +                +++  GD    
Sbjct: 811  PSIAITYNNIGKVYSDQGKYDEALPMLNKSLKI----------------RLVQLGDNHP- 853

Query: 228  EQSLKEFRNFVDTHSNVVEACTLFAQVLVDQEDFDGAEEYFNRSIRVDPENASLYVHRAM 287
                    +  DT++N+       A+V   Q  +D A    N+S+++             
Sbjct: 854  --------SITDTYNNI-------ARVYKSQGKYDNALSVHNKSLKIQLTQLGDNHPSTA 898

Query: 288  LMLQARGNV-------DEAIKLIEKAISIDKSCMF--------AYETLGTIEVQRGRLEE 332
            +     GNV       D+A+ + +K++ I+ + +         AY  +G I + +G  + 
Sbjct: 899  ITYNGIGNVYVSLSKQDDALSVYKKSLKIELAQLGENHPHIADAYNNIGQINIFQGNYDN 958

Query: 333  AVKCFNKALPLARDEAELSHIYSLRDAAIAQMKVCERYNIKKKVSPRSQNITKNEKLAIK 392
            A+   NK+L +       +H+            +   Y  + K         K+ K+ + 
Sbjct: 959  ALLMLNKSLKIHLTRYGDNHL----GITNTYQNIARAYTRQGKYDDALSICNKSLKIVLT 1014

Query: 393  QLRENND-----IIIRPADKGGKTVVMDKADYTQKMTSILNSNDYEIIP-GDPTKTIEES 446
            +  +N +     +I R   K    V  D+  Y   ++    S   ++   GD   TI ++
Sbjct: 1015 KFGDNCNHPRIALIYRHIGK----VHTDQGKYDDAISMFSKSIKIDLAKLGDNHPTIAKT 1070

Query: 447  EK-YGNLENESGQ-KHAASDFTKAFA-DLDEAEKVDPNVADSYYQRGQIYCLFGQYEEAL 503
             +  GN+  + G+   A S   K+    L +  K     + +Y + GQ+Y   G+Y+EAL
Sbjct: 1071 YRELGNVYVKQGKYDDALSALYKSLKIKLSQVGKTYLVNSLTYEKIGQVYHCQGKYDEAL 1130

Query: 504  RNLDKTIALN 513
              L+K++ +N
Sbjct: 1131 SMLNKSLKVN 1140



 Score = 42.4 bits (98), Expect = 0.62,   Method: Compositional matrix adjust.
 Identities = 62/312 (19%), Positives = 131/312 (41%), Gaps = 45/312 (14%)

Query: 122 TQLVEDTSVDPKIKVN-AHIKRAVVHL----HAASDFTKAFA-DLDEAEKVDPNVADSYY 175
           TQL       P I +  ++I +   HL     A S F K+    L +     P++A++Y 
Sbjct: 171 TQLTRLDENHPSIAITYSNIGQVYKHLDKYDEALSMFNKSLKITLTKLSNNHPSIANTYN 230

Query: 176 QRGQIYCLFGQYEEALRNLDKTIALNPNFHVAR-AQRHFVVHKMI-----VPGDRERVEQ 229
           + GQ+Y   G+Y++AL   +K++ +     + R +  H ++         V  ++ + + 
Sbjct: 231 KIGQVYNRQGKYDDALSIYNKSLKIT----LTRLSGNHLIIANTYRDIGQVYNNQGKYDD 286

Query: 230 SLKEFRNFV--------DTHSNVVEACTLFAQVLVDQEDFDGAEEYFNRSIRVD------ 275
           +L  +   +        D H ++        QV  +Q+ +D A   + +S+++       
Sbjct: 287 ALSVYNKSLKITLTKLGDNHPSIANTYDNIGQVYNNQDKYDDALSVYYKSLKIKLTRLGD 346

Query: 276 --PENASLYVHRAMLMLQARGNVDEAIKLIEKAISIDKSCMFA--------YETLGTIEV 325
             P  A  Y +   +    +G  DEA+ ++ K++ I  + +          Y  +     
Sbjct: 347 NHPSIAITYNNIGKVY-SDQGKYDEALSMLNKSLKIKLTQLGGNHPNITNTYNNIARAYN 405

Query: 326 QRGRLEEAVKCFNKALPLARDEAELSHIYSLRDAAIAQMKVCERYNIKKKVSPRSQNITK 385
           ++G+ ++A+  +NK+L +   +   +H       A+    + E YN + K         +
Sbjct: 406 RQGKHDDALSTYNKSLKIQLTQLGDNH----PSTAVKYTDIGEVYNNQGKHDDGLSISKE 461

Query: 386 NEKLAIKQLREN 397
           + K+ + QL EN
Sbjct: 462 SLKIELVQLGEN 473


>gi|428223797|ref|YP_007107894.1| glycosyl transferase family protein [Geitlerinema sp. PCC 7407]
 gi|427983698|gb|AFY64842.1| glycosyl transferase family 9 [Geitlerinema sp. PCC 7407]
          Length = 4135

 Score = 62.8 bits (151), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 50/212 (23%), Positives = 92/212 (43%), Gaps = 8/212 (3%)

Query: 138  AHIKRAVVHLHAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKT 197
            AH   A+  L    D ++A     +A    P+ AD++Y          Q  EA+ +    
Sbjct: 1181 AHYNLAIA-LSQMGDLSRAIHHYQQAIAQKPDYADAHYNLATALKQTQQLSEAVTHYRAA 1239

Query: 198  IALNPNFHVARAQRHFVVHKMIVPGDRERVEQSLKEFRNFVDTHSNVVEACTLFAQVLVD 257
            + L P    A A+    + ++  P D      ++  +R  V   SN+  A    A +L  
Sbjct: 1240 LRLAPTLADAHARLASTLQELGQPDD------AIDHYRQAVTLDSNLAGAHNNLANLLRS 1293

Query: 258  QEDFDGAEEYFNRSIRVDPENASLYVHRAMLMLQARGNVDEAIKLIEKAISIDKSCMFAY 317
            ++DF+GA  ++  ++ + P+ A  + +   + L+  G + EAI   ++A+ +      A+
Sbjct: 1294 RDDFEGASRHYQAALALLPDFAEGHYNLGGV-LKELGRLPEAIAAYQQALDLKPGLARAH 1352

Query: 318  ETLGTIEVQRGRLEEAVKCFNKALPLARDEAE 349
              LG    + G LE A+    +A+ L  D  E
Sbjct: 1353 NNLGACYAETGDLERAIAAHERAIALEPDYVE 1384



 Score = 49.7 bits (117), Expect = 0.004,   Method: Composition-based stats.
 Identities = 41/181 (22%), Positives = 77/181 (42%), Gaps = 11/181 (6%)

Query: 150  ASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARA 209
            A D+ +A A   +A  + P+ A ++Y  G       + +EAL    + IAL+P    A  
Sbjct: 2265 AGDWQQAIAAYRQAIDLQPDFAQAHYNLGTALQAQKRDDEALAAYQRAIALDPGLADAYN 2324

Query: 210  QRHFVVHKMIVPGDRERVEQSLKEFRNFVDTHSNVVEACTLFAQVLVDQEDFDGAEEYFN 269
                +         R  + Q++  +R  +D         +    +L   + ++GA  ++ 
Sbjct: 2325 NLGNLYRS------RRDIPQAIAAYRQAIDLQPQAAIYHSNLGSILQQADQYEGAIAHYQ 2378

Query: 270  RSIRVDPENASLYVHRAML--MLQARGNVDEAIKLIEKAISIDKSCMFAYETLGTIEVQR 327
            ++I +DP+   L V R  L       G  D AI L ++ +  D  C+ A   +  + +Q+
Sbjct: 2379 QAIDLDPQ---LSVARYNLGNAYYDLGEFDRAIALYQQVLRADPDCVQAQFAMALVWLQQ 2435

Query: 328  G 328
            G
Sbjct: 2436 G 2436



 Score = 45.1 bits (105), Expect = 0.10,   Method: Composition-based stats.
 Identities = 55/235 (23%), Positives = 93/235 (39%), Gaps = 43/235 (18%)

Query: 153 FTKAFADLDEAEKVDPNVADSYYQRG-----------------QIYCLFGQYEEALRNLD 195
            T+A A  ++A  + PN +++++ RG                 Q   L   Y EAL +L 
Sbjct: 88  LTEALAAYEQAIALKPNYSEAHHSRGLTLQHLDQLPAAITAYEQAIALRSDYPEALHSLG 147

Query: 196 KTI-----------------ALNPNF-HVARAQRHFVVHKMIVPGDRERVEQSLKEFRNF 237
             +                 AL P F  V  A  + +  +  +P    R EQ++    ++
Sbjct: 148 VALRQQGRTAEAIAAYEAAIALRPEFPEVYYAWGNLLREQGNLPAAIARYEQAIALRPDY 207

Query: 238 VDTHSNVVEACTLFAQVLVDQEDFDGAEEYFNRSIRVDPENASLYVHRAMLMLQARGNVD 297
            D H N+  +     Q+       + AE  +  +I +DP  A+ + H   L+LQA     
Sbjct: 208 TDAHLNLGVSHQSLGQL-------EAAEACYRHAITLDPGAATAH-HNLGLVLQALNCPA 259

Query: 298 EAIKLIEKAISIDKSCMFAYETLGTIEVQRGRLEEAVKCFNKALPLARDEAELSH 352
           EAI    +++ +D +   A   LG    + G +  A+    +AL L  D  E  H
Sbjct: 260 EAIAAHRQSLELDPNNAEALNNLGVALKRTGDVAGAIAHHRQALALRPDYVEGHH 314



 Score = 44.7 bits (104), Expect = 0.14,   Method: Composition-based stats.
 Identities = 32/155 (20%), Positives = 67/155 (43%), Gaps = 7/155 (4%)

Query: 136  VNAHIKRAVVHLHAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLD 195
            V AH+   V  L      T+A A   +   + P+  +++          GQ+ EA+ +  
Sbjct: 2801 VEAHLGLGVA-LKQQGQLTEAIAHYRQVLDLRPDYPEAHNNLANALKEQGQWSEAIAHYQ 2859

Query: 196  KTIALNPNFHVARAQRHFVVHKMIVPGDRERVEQSLKEFRNFVDTHSNVVEACTLFAQVL 255
            + +AL P+F  A       + ++      +R+E+++  +R  +    +  EA       L
Sbjct: 2860 RALALRPDFVAAHNNLANALQRL------DRIEEAVAHYRRAIALQPDYAEAYNNLGNAL 2913

Query: 256  VDQEDFDGAEEYFNRSIRVDPENASLYVHRAMLML 290
              Q D  GA   + +++++ P+ A  ++  A + L
Sbjct: 2914 QSQLDHPGAIAAYRQALQIKPDYAEAHLGLAAVHL 2948



 Score = 44.3 bits (103), Expect = 0.17,   Method: Composition-based stats.
 Identities = 45/185 (24%), Positives = 74/185 (40%), Gaps = 7/185 (3%)

Query: 168 PNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQRHFVVHKMIVPGDRERV 227
           P   + Y   G +    G   EAL   ++ IAL PN+  A   R   +  +      +++
Sbjct: 69  PRSPEIYLNFGNVLRRQGLLTEALAAYEQAIALKPNYSEAHHSRGLTLQHL------DQL 122

Query: 228 EQSLKEFRNFVDTHSNVVEACTLFAQVLVDQEDFDGAEEYFNRSIRVDPENASLYVHRAM 287
             ++  +   +   S+  EA       L  Q     A   +  +I + PE   +Y     
Sbjct: 123 PAAITAYEQAIALRSDYPEALHSLGVALRQQGRTAEAIAAYEAAIALRPEFPEVYYAWGN 182

Query: 288 LMLQARGNVDEAIKLIEKAISIDKSCMFAYETLGTIEVQRGRLEEAVKCFNKALPLARDE 347
           L L+ +GN+  AI   E+AI++      A+  LG      G+LE A  C+  A+ L    
Sbjct: 183 L-LREQGNLPAAIARYEQAIALRPDYTDAHLNLGVSHQSLGQLEAAEACYRHAITLDPGA 241

Query: 348 AELSH 352
           A   H
Sbjct: 242 ATAHH 246



 Score = 43.5 bits (101), Expect = 0.32,   Method: Composition-based stats.
 Identities = 41/188 (21%), Positives = 87/188 (46%), Gaps = 10/188 (5%)

Query: 158 ADLDEAEKVDPNVA-DSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQRHFVVH 216
           A L E ++   +++ ++  ++GQ     G Y  A+    + +A  P+  +A       + 
Sbjct: 605 AALAEGDRPSADLSREALQEQGQAALSSGNYVGAIAAYQQLLAQWPDTALAHHYLGLALQ 664

Query: 217 KMIVPGD-RERVEQSLKEFRNFVDTHSNVVEACTLFAQVLVDQEDFDGAEEYFNRSIRVD 275
            +    + R+  E+++    + V TH N+   C L       Q D D A  ++  +I   
Sbjct: 665 AVDRYAEARQHYERAIALDASLVATHINLGSVCQL-------QGDEDTAIAHYRAAIARR 717

Query: 276 PENASLYVHRAMLMLQARGNVDEAIKLIEKAISIDKSCMFAYETLGTIEVQRGRLEEAVK 335
           P+ A+ +++   + L+ RG+++EA+   ++A+ +      A+  LG +    G    A+ 
Sbjct: 718 PDVAAAHLNLGSI-LKERGDLEEALLHCKEAVRLQSDLADAHHNLGVVYQGLGDPAAAIA 776

Query: 336 CFNKALPL 343
           C+ +AL L
Sbjct: 777 CYERALAL 784



 Score = 42.4 bits (98), Expect = 0.69,   Method: Composition-based stats.
 Identities = 26/88 (29%), Positives = 44/88 (50%), Gaps = 6/88 (6%)

Query: 449  YGNLENESGQKHAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDK 508
            +  L N +   H    F +A A  ++A ++ P+ A+++Y  G  +      E AL + D+
Sbjct: 3346 FAALHNLATAYHQQQQFEEAIAFYEQALQLQPDHAEAHYNLGLAHRQCNNLEAALAHYDR 3405

Query: 509  TIALNPNFHVARAQRHFVWTSTLAELMA 536
             IAL P++    A+ H  W   LA L+A
Sbjct: 3406 AIALQPDY----AEAH--WNRALALLLA 3427



 Score = 40.4 bits (93), Expect = 2.5,   Method: Composition-based stats.
 Identities = 48/207 (23%), Positives = 88/207 (42%), Gaps = 8/207 (3%)

Query: 143  AVVHLHAASDFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNP 202
            A+ HL A      A A L+        VA+ +Y  G  Y        A  +  + IAL P
Sbjct: 2740 AIAHLSAGQP-EAAIALLELLVPQYSTVAEVHYLLGLAYRRQHHLIAAQDHYQRAIALQP 2798

Query: 203  NFHVARAQRHFVVHKMIVPGDRERVEQSLKEFRNFVDTHSNVVEACTLFAQVLVDQEDFD 262
            N HV   + H  +   +    + ++ +++  +R  +D   +  EA    A  L +Q  + 
Sbjct: 2799 N-HV---EAHLGLG--VALKQQGQLTEAIAHYRQVLDLRPDYPEAHNNLANALKEQGQWS 2852

Query: 263  GAEEYFNRSIRVDPENASLYVHRAMLMLQARGNVDEAIKLIEKAISIDKSCMFAYETLGT 322
             A  ++ R++ + P+  + + + A   LQ    ++EA+    +AI++      AY  LG 
Sbjct: 2853 EAIAHYQRALALRPDFVAAHNNLAN-ALQRLDRIEEAVAHYRRAIALQPDYAEAYNNLGN 2911

Query: 323  IEVQRGRLEEAVKCFNKALPLARDEAE 349
                +     A+  + +AL +  D AE
Sbjct: 2912 ALQSQLDHPGAIAAYRQALQIKPDYAE 2938



 Score = 40.4 bits (93), Expect = 2.8,   Method: Composition-based stats.
 Identities = 55/231 (23%), Positives = 91/231 (39%), Gaps = 32/231 (13%)

Query: 152 DFTKAFADLDEAEKVDPNVADSYYQRGQIYCLFGQYEEALRNLDKTIALNPNFHVARAQR 211
           D   A A LD    VD +VA      G+   +   Y+   R L +    +P +  AR  R
Sbjct: 531 DTAAAIAQLDLVITVDTSVAHLAGALGKPVWILLAYDADWRWLTERTD-SPWYPTARLFR 589

Query: 212 HFV----------VHKMIVPGDRERVE---QSLKEFRNFVDTHSNVVEACTLFAQVLVDQ 258
                        V   +  GDR   +   ++L+E      +  N V A   + Q+L   
Sbjct: 590 QAAPGDWAGVVAQVTAALAEGDRPSADLSREALQEQGQAALSSGNYVGAIAAYQQLLAQW 649

Query: 259 ED-----------------FDGAEEYFNRSIRVDPENASLYVHRAMLMLQARGNVDEAIK 301
            D                 +  A +++ R+I +D    + +++   +  Q +G+ D AI 
Sbjct: 650 PDTALAHHYLGLALQAVDRYAEARQHYERAIALDASLVATHINLGSV-CQLQGDEDTAIA 708

Query: 302 LIEKAISIDKSCMFAYETLGTIEVQRGRLEEAVKCFNKALPLARDEAELSH 352
               AI+       A+  LG+I  +RG LEEA+    +A+ L  D A+  H
Sbjct: 709 HYRAAIARRPDVAAAHLNLGSILKERGDLEEALLHCKEAVRLQSDLADAHH 759


  Database: nr
    Posted date:  Mar 3, 2013 10:45 PM
  Number of letters in database: 999,999,864
  Number of sequences in database:  2,912,245
  
  Database: /local_scratch/syshi//blastdatabase/nr.01
    Posted date:  Mar 3, 2013 10:52 PM
  Number of letters in database: 999,999,666
  Number of sequences in database:  2,912,720
  
  Database: /local_scratch/syshi//blastdatabase/nr.02
    Posted date:  Mar 3, 2013 10:58 PM
  Number of letters in database: 999,999,938
  Number of sequences in database:  3,014,250
  
  Database: /local_scratch/syshi//blastdatabase/nr.03
    Posted date:  Mar 3, 2013 11:03 PM
  Number of letters in database: 999,999,780
  Number of sequences in database:  2,805,020
  
  Database: /local_scratch/syshi//blastdatabase/nr.04
    Posted date:  Mar 3, 2013 11:08 PM
  Number of letters in database: 999,999,551
  Number of sequences in database:  2,816,253
  
  Database: /local_scratch/syshi//blastdatabase/nr.05
    Posted date:  Mar 3, 2013 11:13 PM
  Number of letters in database: 999,999,897
  Number of sequences in database:  2,981,387
  
  Database: /local_scratch/syshi//blastdatabase/nr.06
    Posted date:  Mar 3, 2013 11:18 PM
  Number of letters in database: 999,999,649
  Number of sequences in database:  2,911,476
  
  Database: /local_scratch/syshi//blastdatabase/nr.07
    Posted date:  Mar 3, 2013 11:24 PM
  Number of letters in database: 999,999,452
  Number of sequences in database:  2,920,260
  
  Database: /local_scratch/syshi//blastdatabase/nr.08
    Posted date:  Mar 3, 2013 11:25 PM
  Number of letters in database: 64,230,274
  Number of sequences in database:  189,558
  
Lambda     K      H
   0.317    0.132    0.372 

Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 8,079,914,562
Number of Sequences: 23463169
Number of extensions: 329725668
Number of successful extensions: 1279892
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 3101
Number of HSP's successfully gapped in prelim test: 9616
Number of HSP's that attempted gapping in prelim test: 1167901
Number of HSP's gapped (non-prelim): 85083
length of query: 551
length of database: 8,064,228,071
effective HSP length: 148
effective length of query: 403
effective length of database: 8,886,646,355
effective search space: 3581318481065
effective search space used: 3581318481065
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 80 (35.4 bits)