Query psy12719
Match_columns 116
No_of_seqs 251 out of 1073
Neff 12.1
Searched_HMMs 29240
Date Fri Aug 16 17:56:04 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy12719.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/12719hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 4gco_A Protein STI-1; structur 99.9 2.8E-25 9.7E-30 116.0 11.9 103 4-107 23-125 (126)
2 4ga2_A E3 SUMO-protein ligase 99.9 1E-25 3.5E-30 120.8 10.4 112 3-115 6-117 (150)
3 4ga2_A E3 SUMO-protein ligase 99.9 2.9E-24 1E-28 115.1 10.3 109 3-112 40-149 (150)
4 3gyz_A Chaperone protein IPGC; 99.9 4.2E-25 1.4E-29 118.5 5.7 90 6-96 48-137 (151)
5 4gyw_A UDP-N-acetylglucosamine 99.9 1.2E-23 3.9E-28 135.4 12.2 112 4-116 19-130 (723)
6 2pl2_A Hypothetical conserved 99.9 8.8E-24 3E-28 119.2 10.2 112 4-116 15-137 (217)
7 3urz_A Uncharacterized protein 99.9 4E-23 1.4E-27 115.9 11.2 108 4-112 14-137 (208)
8 4gyw_A UDP-N-acetylglucosamine 99.9 1E-22 3.4E-27 131.1 12.6 113 3-116 52-164 (723)
9 3gyz_A Chaperone protein IPGC; 99.9 2.1E-22 7.2E-27 108.0 11.8 110 6-116 14-123 (151)
10 2pl2_A Hypothetical conserved 99.9 1.1E-22 3.9E-27 114.7 11.2 106 8-115 98-203 (217)
11 4gco_A Protein STI-1; structur 99.9 1.1E-22 3.7E-27 106.2 9.6 97 19-116 4-100 (126)
12 3upv_A Heat shock protein STI1 99.9 7.5E-22 2.6E-26 102.6 12.1 105 4-109 14-124 (126)
13 3vtx_A MAMA; tetratricopeptide 99.9 9E-22 3.1E-26 108.1 12.2 112 4-116 15-160 (184)
14 2h6f_A Protein farnesyltransfe 99.9 1.6E-22 5.4E-27 122.3 9.7 109 6-115 109-218 (382)
15 2vgx_A Chaperone SYCD; alterna 99.9 8.6E-23 2.9E-27 109.2 7.6 103 4-107 31-133 (148)
16 2vgx_A Chaperone SYCD; alterna 99.9 1.1E-21 3.7E-26 104.9 10.8 104 12-116 5-108 (148)
17 2xcb_A PCRH, regulatory protei 99.9 7.3E-22 2.5E-26 104.8 9.9 106 4-110 28-133 (142)
18 4i17_A Hypothetical protein; T 99.9 1.5E-21 5.2E-26 110.4 11.8 112 4-116 17-136 (228)
19 2vyi_A SGTA protein; chaperone 99.9 6.2E-21 2.1E-25 99.0 13.1 110 4-114 22-131 (131)
20 3sz7_A HSC70 cochaperone (SGT) 99.9 1.9E-21 6.6E-26 105.3 11.2 104 3-107 20-123 (164)
21 3rkv_A Putative peptidylprolyl 99.9 2.6E-21 9E-26 104.5 11.4 110 4-114 21-149 (162)
22 3vtx_A MAMA; tetratricopeptide 99.9 3.7E-21 1.3E-25 105.6 12.2 94 4-98 83-176 (184)
23 2lni_A Stress-induced-phosphop 99.9 3.5E-21 1.2E-25 100.4 11.5 108 4-112 26-133 (133)
24 1p5q_A FKBP52, FK506-binding p 99.9 2.6E-21 8.9E-26 115.3 11.9 111 4-115 157-282 (336)
25 2h6f_A Protein farnesyltransfe 99.9 8.7E-22 3E-26 119.1 9.5 110 4-114 141-252 (382)
26 3k9i_A BH0479 protein; putativ 99.9 1.5E-21 5E-26 100.5 8.1 108 6-114 2-112 (117)
27 2xcb_A PCRH, regulatory protei 99.9 2E-21 6.7E-26 103.1 8.6 101 15-116 5-105 (142)
28 4i17_A Hypothetical protein; T 99.9 1.1E-20 3.7E-25 106.9 11.9 110 3-113 51-169 (228)
29 1a17_A Serine/threonine protei 99.9 1.4E-20 4.7E-25 101.5 11.8 112 4-116 23-136 (166)
30 1wao_1 Serine/threonine protei 99.9 1.8E-20 6.2E-25 116.2 13.6 113 3-116 15-129 (477)
31 2fbn_A 70 kDa peptidylprolyl i 99.9 1.7E-20 5.8E-25 104.3 12.2 111 4-115 48-174 (198)
32 2e2e_A Formate-dependent nitri 99.9 2.4E-21 8.1E-26 105.9 8.5 112 4-116 20-134 (177)
33 1hxi_A PEX5, peroxisome target 99.9 3.8E-21 1.3E-25 99.6 8.5 94 4-98 27-120 (121)
34 4eqf_A PEX5-related protein; a 99.9 2.3E-20 7.8E-25 111.6 13.0 113 3-116 186-300 (365)
35 1zu2_A Mitochondrial import re 99.9 1.2E-20 4E-25 100.9 10.3 100 6-106 14-134 (158)
36 1elw_A TPR1-domain of HOP; HOP 99.9 8.6E-20 2.9E-24 93.1 12.8 104 4-108 14-117 (118)
37 1na0_A Designed protein CTPR3; 99.9 1.2E-19 4.2E-24 93.3 13.0 107 4-111 19-125 (125)
38 3q49_B STIP1 homology and U bo 99.8 2.8E-20 9.5E-25 97.7 10.6 108 4-112 19-131 (137)
39 4gcn_A Protein STI-1; structur 99.8 3.2E-20 1.1E-24 96.9 10.5 100 4-105 18-124 (127)
40 2fo7_A Synthetic consensus TPR 99.8 5.6E-20 1.9E-24 95.6 11.5 112 4-116 11-122 (136)
41 3as5_A MAMA; tetratricopeptide 99.8 6.6E-20 2.3E-24 100.0 12.2 112 4-116 52-163 (186)
42 2xev_A YBGF; tetratricopeptide 99.8 2.1E-19 7E-24 93.5 12.8 108 4-112 12-125 (129)
43 1kt0_A FKBP51, 51 kDa FK506-bi 99.8 2.2E-20 7.6E-25 115.2 10.5 111 4-115 278-403 (457)
44 2hr2_A Hypothetical protein; a 99.8 4.4E-21 1.5E-25 102.7 6.1 99 4-103 21-142 (159)
45 2pzi_A Probable serine/threoni 99.8 6.5E-21 2.2E-25 122.3 7.1 111 4-116 443-553 (681)
46 1w3b_A UDP-N-acetylglucosamine 99.8 9.1E-20 3.1E-24 109.9 11.6 110 5-115 248-357 (388)
47 2dba_A Smooth muscle cell asso 99.8 2.5E-19 8.6E-24 94.9 12.0 106 4-110 38-146 (148)
48 3uq3_A Heat shock protein STI1 99.8 9.1E-20 3.1E-24 104.1 11.0 108 8-116 119-226 (258)
49 1xnf_A Lipoprotein NLPI; TPR, 99.8 9.7E-20 3.3E-24 104.9 11.0 112 4-116 15-130 (275)
50 1w3b_A UDP-N-acetylglucosamine 99.8 1.8E-19 6.1E-24 108.6 12.5 110 5-115 180-289 (388)
51 1fch_A Peroxisomal targeting s 99.8 1E-19 3.5E-24 108.6 11.2 109 6-115 229-348 (368)
52 4abn_A Tetratricopeptide repea 99.8 8.1E-20 2.8E-24 113.2 11.1 108 8-116 193-311 (474)
53 2q7f_A YRRB protein; TPR, prot 99.8 1.6E-19 5.4E-24 102.5 11.4 108 6-114 69-176 (243)
54 2q7f_A YRRB protein; TPR, prot 99.8 2.9E-19 1E-23 101.3 12.3 112 4-116 101-212 (243)
55 3upv_A Heat shock protein STI1 99.8 1.7E-19 5.9E-24 93.7 10.3 91 25-116 1-91 (126)
56 2vsy_A XCC0866; transferase, g 99.8 1.8E-19 6.1E-24 113.5 12.0 111 4-115 33-146 (568)
57 3as5_A MAMA; tetratricopeptide 99.8 1.2E-19 4.2E-24 98.9 10.0 112 4-116 18-129 (186)
58 4abn_A Tetratricopeptide repea 99.8 5.6E-20 1.9E-24 113.9 9.6 112 3-116 111-240 (474)
59 1ihg_A Cyclophilin 40; ppiase 99.8 1.2E-19 4.2E-24 109.4 10.7 111 4-115 233-359 (370)
60 1fch_A Peroxisomal targeting s 99.8 4E-19 1.4E-23 106.1 12.7 110 6-116 193-304 (368)
61 3cv0_A Peroxisome targeting si 99.8 6.1E-19 2.1E-23 103.6 13.2 113 3-116 147-259 (327)
62 1hh8_A P67PHOX, NCF-2, neutrop 99.8 1.8E-19 6.1E-24 100.8 10.5 109 4-116 16-140 (213)
63 3u4t_A TPR repeat-containing p 99.8 1.5E-19 5.1E-24 104.2 9.8 111 4-116 13-127 (272)
64 2vq2_A PILW, putative fimbrial 99.8 5.5E-19 1.9E-23 99.0 11.9 107 7-114 55-164 (225)
65 2vsy_A XCC0866; transferase, g 99.8 1.8E-19 6.2E-24 113.5 10.9 109 7-116 2-110 (568)
66 2vq2_A PILW, putative fimbrial 99.8 5.7E-19 2E-23 99.0 11.9 112 4-116 18-132 (225)
67 2ho1_A Type 4 fimbrial biogene 99.8 5.7E-19 1.9E-23 100.8 12.0 110 5-115 82-193 (252)
68 2pzi_A Probable serine/threoni 99.8 4.4E-19 1.5E-23 113.9 12.2 110 5-115 402-519 (681)
69 3cv0_A Peroxisome targeting si 99.8 5.1E-19 1.8E-23 103.9 11.4 112 4-116 182-305 (327)
70 3u4t_A TPR repeat-containing p 99.8 1.2E-18 4.1E-23 100.4 12.6 107 4-112 84-191 (272)
71 1elr_A TPR2A-domain of HOP; HO 99.8 8.4E-19 2.9E-23 90.9 10.7 109 4-114 14-129 (131)
72 3hym_B Cell division cycle pro 99.8 7.1E-19 2.4E-23 103.4 11.5 106 9-115 106-211 (330)
73 2ho1_A Type 4 fimbrial biogene 99.8 5.1E-19 1.7E-23 101.0 10.3 112 4-116 47-160 (252)
74 3qky_A Outer membrane assembly 99.8 3.3E-19 1.1E-23 102.7 9.2 113 4-116 25-167 (261)
75 4gcn_A Protein STI-1; structur 99.8 1.6E-19 5.6E-24 94.2 7.1 90 26-116 6-102 (127)
76 3mkr_A Coatomer subunit epsilo 99.8 1.3E-18 4.6E-23 101.9 11.5 112 3-115 139-252 (291)
77 3uq3_A Heat shock protein STI1 99.8 3.7E-19 1.3E-23 101.5 8.9 113 3-116 47-192 (258)
78 3qou_A Protein YBBN; thioredox 99.8 1.1E-18 3.9E-23 102.0 11.1 111 4-115 127-273 (287)
79 3hym_B Cell division cycle pro 99.8 1.2E-18 4.2E-23 102.4 11.3 110 5-115 67-177 (330)
80 4eqf_A PEX5-related protein; a 99.8 4.3E-19 1.5E-23 106.1 9.3 112 3-115 222-345 (365)
81 1xnf_A Lipoprotein NLPI; TPR, 99.8 2E-18 6.9E-23 99.4 11.6 110 4-115 53-162 (275)
82 3sz7_A HSC70 cochaperone (SGT) 99.8 1.5E-18 5.1E-23 93.9 10.4 92 24-116 7-98 (164)
83 2r5s_A Uncharacterized protein 99.8 1E-19 3.5E-24 99.5 5.8 111 4-115 16-162 (176)
84 3ieg_A DNAJ homolog subfamily 99.8 1.9E-18 6.4E-23 102.5 11.6 112 4-116 13-139 (359)
85 3urz_A Uncharacterized protein 99.8 3.1E-18 1.1E-22 95.9 11.6 105 3-108 63-201 (208)
86 3qky_A Outer membrane assembly 99.8 1.2E-18 4.1E-23 100.3 10.1 107 3-110 61-198 (261)
87 3q49_B STIP1 homology and U bo 99.8 3.2E-18 1.1E-22 89.8 10.7 94 22-116 3-96 (137)
88 3fp2_A TPR repeat-containing p 99.8 2.3E-18 8E-23 107.0 11.5 113 3-116 285-397 (537)
89 2yhc_A BAMD, UPF0169 lipoprote 99.8 1.9E-18 6.6E-23 97.8 10.1 109 6-115 53-202 (225)
90 1hxi_A PEX5, peroxisome target 99.8 2.6E-18 8.9E-23 88.9 9.7 87 29-116 18-104 (121)
91 2l6j_A TPR repeat-containing p 99.8 1.4E-17 4.7E-22 84.4 11.8 89 27-116 3-97 (111)
92 1p5q_A FKBP52, FK506-binding p 99.8 8.8E-20 3E-24 108.8 3.8 110 6-116 125-249 (336)
93 2if4_A ATFKBP42; FKBP-like, al 99.8 1.1E-18 3.6E-23 104.2 8.4 106 3-109 188-310 (338)
94 2kck_A TPR repeat; tetratricop 99.8 3.9E-18 1.3E-22 86.3 9.3 92 4-96 16-110 (112)
95 3ieg_A DNAJ homolog subfamily 99.8 5.7E-18 1.9E-22 100.4 11.4 108 6-114 49-171 (359)
96 2yhc_A BAMD, UPF0169 lipoprote 99.8 2.6E-18 9E-23 97.2 9.3 113 4-116 14-166 (225)
97 2xpi_A Anaphase-promoting comp 99.8 6.4E-18 2.2E-22 106.3 11.7 112 4-116 383-494 (597)
98 2y4t_A DNAJ homolog subfamily 99.8 1.2E-17 4.1E-22 102.0 12.4 112 4-116 36-162 (450)
99 2kck_A TPR repeat; tetratricop 99.8 2.9E-18 9.9E-23 86.7 8.2 92 24-116 2-96 (112)
100 2kat_A Uncharacterized protein 99.8 2.3E-17 7.7E-22 84.4 11.2 100 12-112 3-104 (115)
101 2e2e_A Formate-dependent nitri 99.8 1.8E-17 6.2E-22 90.4 11.0 103 3-106 53-158 (177)
102 2hr2_A Hypothetical protein; a 99.8 1E-17 3.5E-22 89.8 9.6 88 28-116 11-121 (159)
103 2y4t_A DNAJ homolog subfamily 99.8 2.7E-17 9.1E-22 100.5 12.8 112 4-116 70-196 (450)
104 2ond_A Cleavage stimulation fa 99.8 1.1E-17 3.8E-22 98.5 10.7 110 6-115 111-221 (308)
105 2xpi_A Anaphase-promoting comp 99.8 1.7E-17 5.8E-22 104.4 11.8 112 4-116 451-569 (597)
106 1na3_A Designed protein CTPR2; 99.8 5.6E-17 1.9E-21 79.4 11.1 86 25-111 6-91 (91)
107 3fp2_A TPR repeat-containing p 99.7 1.5E-17 5.2E-22 103.4 10.2 111 4-116 253-363 (537)
108 2c2l_A CHIP, carboxy terminus 99.7 5E-18 1.7E-22 99.0 7.6 92 4-96 14-105 (281)
109 2r5s_A Uncharacterized protein 99.7 1.5E-17 5.3E-22 90.9 9.1 80 11-91 91-172 (176)
110 1hh8_A P67PHOX, NCF-2, neutrop 99.7 1E-16 3.4E-21 89.6 12.5 101 3-104 46-162 (213)
111 1qqe_A Vesicular transport pro 99.7 9.5E-18 3.2E-22 98.2 8.2 112 4-116 87-218 (292)
112 2fbn_A 70 kDa peptidylprolyl i 99.7 3E-18 1E-22 95.2 5.5 111 5-116 15-141 (198)
113 2lni_A Stress-induced-phosphop 99.7 5.4E-17 1.9E-21 84.3 10.0 92 24-116 12-103 (133)
114 1kt0_A FKBP51, 51 kDa FK506-bi 99.7 6.6E-19 2.3E-23 108.7 3.0 110 6-116 246-370 (457)
115 3edt_B KLC 2, kinesin light ch 99.7 1E-17 3.6E-22 96.5 7.6 113 3-116 52-188 (283)
116 2ond_A Cleavage stimulation fa 99.7 1.3E-16 4.4E-21 94.0 12.2 105 11-116 33-153 (308)
117 3rkv_A Putative peptidylprolyl 99.7 4.8E-17 1.6E-21 87.8 8.1 89 27-116 10-116 (162)
118 1elw_A TPR1-domain of HOP; HOP 99.7 2.4E-16 8.3E-21 80.2 10.3 89 27-116 3-91 (118)
119 2c2l_A CHIP, carboxy terminus 99.7 1.4E-16 5E-21 92.9 10.6 91 25-116 1-91 (281)
120 2gw1_A Mitochondrial precursor 99.7 1.4E-17 4.6E-22 103.0 6.6 107 7-114 283-389 (514)
121 2vyi_A SGTA protein; chaperone 99.7 1.3E-16 4.4E-21 82.5 9.1 93 23-116 7-99 (131)
122 2gw1_A Mitochondrial precursor 99.7 7.6E-17 2.6E-21 99.7 9.4 112 4-115 348-467 (514)
123 3mkr_A Coatomer subunit epsilo 99.7 5.4E-16 1.9E-20 90.9 12.4 95 6-101 178-273 (291)
124 3edt_B KLC 2, kinesin light ch 99.7 5.7E-17 1.9E-21 93.4 8.1 113 3-116 94-271 (283)
125 2dba_A Smooth muscle cell asso 99.7 3.7E-16 1.3E-20 82.6 10.6 93 23-116 23-118 (148)
126 1qqe_A Vesicular transport pro 99.7 2.1E-17 7.1E-22 96.8 6.3 112 4-116 47-177 (292)
127 2xev_A YBGF; tetratricopeptide 99.7 2.3E-16 7.9E-21 81.8 8.9 87 29-116 3-95 (129)
128 3ma5_A Tetratricopeptide repea 99.7 3.4E-16 1.2E-20 78.3 9.2 90 23-113 2-93 (100)
129 1na0_A Designed protein CTPR3; 99.7 6.7E-16 2.3E-20 79.2 10.4 92 24-116 4-96 (125)
130 2qfc_A PLCR protein; TPR, HTH, 99.7 5E-16 1.7E-20 90.9 10.5 112 4-116 125-255 (293)
131 1elr_A TPR2A-domain of HOP; HO 99.7 2.3E-16 8E-21 81.6 8.2 91 25-116 1-98 (131)
132 2fo7_A Synthetic consensus TPR 99.7 1E-15 3.5E-20 79.3 10.2 91 4-95 45-135 (136)
133 3ulq_A Response regulator aspa 99.7 1.8E-16 6.2E-21 95.6 8.0 112 4-116 153-283 (383)
134 3nf1_A KLC 1, kinesin light ch 99.7 1.8E-16 6.2E-21 92.5 7.6 113 3-116 120-297 (311)
135 1a17_A Serine/threonine protei 99.7 1.1E-15 3.7E-20 82.2 10.1 88 28-116 13-100 (166)
136 3u3w_A Transcriptional activat 99.7 3.6E-16 1.2E-20 91.5 8.1 112 4-116 125-256 (293)
137 3nf1_A KLC 1, kinesin light ch 99.7 2.1E-16 7.1E-21 92.3 6.8 112 4-116 79-214 (311)
138 4g1t_A Interferon-induced prot 99.7 2.8E-15 9.6E-20 92.2 12.1 111 3-113 60-188 (472)
139 4a1s_A PINS, partner of inscut 99.6 8E-16 2.7E-20 93.1 7.5 108 4-112 58-181 (411)
140 4g1t_A Interferon-induced prot 99.6 1.4E-15 4.9E-20 93.5 8.7 110 6-115 225-352 (472)
141 3ulq_A Response regulator aspa 99.6 3.1E-16 1E-20 94.6 5.5 112 4-116 113-243 (383)
142 3ro3_A PINS homolog, G-protein 99.6 6.7E-16 2.3E-20 82.3 6.1 112 4-116 19-148 (164)
143 2l6j_A TPR repeat-containing p 99.6 8.8E-17 3E-21 81.4 2.2 83 4-87 14-102 (111)
144 3k9i_A BH0479 protein; putativ 99.6 3.7E-16 1.3E-20 80.2 4.6 76 40-116 2-80 (117)
145 2ooe_A Cleavage stimulation fa 99.6 5.6E-15 1.9E-19 92.5 10.3 111 5-115 332-443 (530)
146 1ouv_A Conserved hypothetical 99.6 1.9E-14 6.6E-19 83.2 11.8 105 5-115 17-132 (273)
147 3sf4_A G-protein-signaling mod 99.6 9.7E-16 3.3E-20 92.3 6.3 112 4-116 197-326 (406)
148 2qfc_A PLCR protein; TPR, HTH, 99.6 3.5E-14 1.2E-18 83.1 12.6 112 4-116 85-215 (293)
149 3gw4_A Uncharacterized protein 99.6 1.7E-15 5.7E-20 83.9 6.5 112 4-116 36-166 (203)
150 3q15_A PSP28, response regulat 99.6 2.6E-15 8.8E-20 90.5 7.7 113 3-116 150-280 (378)
151 3ro2_A PINS homolog, G-protein 99.6 2.8E-15 9.4E-20 88.0 6.8 108 4-112 15-138 (338)
152 2ifu_A Gamma-SNAP; membrane fu 99.6 8.2E-16 2.8E-20 90.6 4.3 110 4-115 86-213 (307)
153 3gw4_A Uncharacterized protein 99.6 1.8E-14 6.2E-19 79.7 9.4 111 5-116 3-126 (203)
154 3sf4_A G-protein-signaling mod 99.6 3.3E-15 1.1E-19 90.0 6.7 108 4-112 19-142 (406)
155 4a1s_A PINS, partner of inscut 99.6 1.5E-15 5.1E-20 91.9 5.1 112 4-116 233-362 (411)
156 2ooe_A Cleavage stimulation fa 99.6 7.2E-14 2.4E-18 87.5 12.3 105 11-116 255-375 (530)
157 3u3w_A Transcriptional activat 99.6 1.9E-14 6.5E-19 84.2 9.2 111 5-116 86-215 (293)
158 3ro2_A PINS homolog, G-protein 99.6 3.8E-15 1.3E-19 87.4 6.0 112 4-116 193-322 (338)
159 4f3v_A ESX-1 secretion system 99.6 1.3E-14 4.4E-19 84.4 8.0 111 4-116 112-227 (282)
160 3qou_A Protein YBBN; thioredox 99.6 5.6E-14 1.9E-18 82.2 10.7 93 23-116 112-238 (287)
161 1ihg_A Cyclophilin 40; ppiase 99.6 1.7E-14 5.7E-19 87.2 8.4 88 28-116 223-326 (370)
162 2if4_A ATFKBP42; FKBP-like, al 99.6 3.6E-15 1.2E-19 89.1 5.3 93 23-116 174-283 (338)
163 1na3_A Designed protein CTPR2; 99.6 3.9E-14 1.3E-18 69.1 8.1 71 4-74 19-89 (91)
164 2ifu_A Gamma-SNAP; membrane fu 99.6 5.5E-15 1.9E-19 87.1 5.8 111 4-116 46-174 (307)
165 2kc7_A BFR218_protein; tetratr 99.6 2.8E-15 9.7E-20 74.5 4.0 68 32-100 4-72 (99)
166 1wao_1 Serine/threonine protei 99.6 1.6E-15 5.5E-20 94.2 3.6 89 27-116 5-93 (477)
167 3dra_A Protein farnesyltransfe 99.6 2E-13 6.7E-18 80.6 11.9 106 8-114 124-237 (306)
168 2kc7_A BFR218_protein; tetratr 99.5 2.2E-13 7.4E-18 67.6 10.2 84 4-96 10-94 (99)
169 3dra_A Protein farnesyltransfe 99.5 4.2E-13 1.4E-17 79.2 12.5 103 11-114 50-161 (306)
170 1pc2_A Mitochondria fission pr 99.5 5.1E-13 1.7E-17 70.9 11.6 104 5-109 9-117 (152)
171 1dce_A Protein (RAB geranylger 99.5 2E-13 6.8E-18 86.5 11.9 100 11-111 46-157 (567)
172 1ouv_A Conserved hypothetical 99.5 2.5E-13 8.4E-18 78.5 11.3 97 7-109 55-158 (273)
173 3n71_A Histone lysine methyltr 99.5 3E-14 1E-18 88.7 7.6 111 4-115 319-453 (490)
174 3bee_A Putative YFRE protein; 99.5 4E-13 1.4E-17 66.3 10.1 73 24-97 2-77 (93)
175 2kat_A Uncharacterized protein 99.5 8E-14 2.7E-18 71.1 7.8 71 45-116 2-72 (115)
176 1dce_A Protein (RAB geranylger 99.5 5.1E-13 1.7E-17 84.6 12.8 100 10-110 89-191 (567)
177 1zu2_A Mitochondrial import re 99.5 1.5E-14 5.2E-19 77.4 5.0 72 39-111 13-94 (158)
178 3rjv_A Putative SEL1 repeat pr 99.5 8.3E-14 2.8E-18 78.2 8.3 99 9-110 68-175 (212)
179 3rjv_A Putative SEL1 repeat pr 99.5 2.9E-13 9.8E-18 76.0 10.2 107 4-115 28-147 (212)
180 3q7a_A Farnesyltransferase alp 99.5 1.4E-12 4.7E-17 78.1 12.2 106 8-114 68-176 (349)
181 3q15_A PSP28, response regulat 99.5 1.7E-13 5.8E-18 82.6 8.3 90 3-93 191-291 (378)
182 1hz4_A MALT regulatory protein 99.5 2.7E-13 9.1E-18 81.4 8.1 110 5-115 64-192 (373)
183 3dss_A Geranylgeranyl transfer 99.5 3.7E-12 1.3E-16 75.8 12.7 100 10-110 90-192 (331)
184 1hz4_A MALT regulatory protein 99.4 4.8E-13 1.6E-17 80.3 7.6 112 4-116 24-154 (373)
185 1klx_A Cysteine rich protein B 99.4 8.1E-12 2.8E-16 65.8 11.1 101 7-115 8-115 (138)
186 2v5f_A Prolyl 4-hydroxylase su 99.4 7.8E-12 2.7E-16 62.9 10.4 81 27-108 4-91 (104)
187 3e4b_A ALGK; tetratricopeptide 99.4 3.2E-12 1.1E-16 79.0 10.5 95 9-108 194-294 (452)
188 4f3v_A ESX-1 secretion system 99.4 3.5E-12 1.2E-16 74.3 10.0 101 3-105 144-249 (282)
189 3dss_A Geranylgeranyl transfer 99.4 1.8E-11 6.2E-16 72.9 12.7 104 8-112 43-159 (331)
190 3q7a_A Farnesyltransferase alp 99.4 8.1E-12 2.8E-16 74.8 10.6 105 7-112 101-216 (349)
191 3qww_A SET and MYND domain-con 99.4 7.1E-12 2.4E-16 77.1 9.8 94 6-100 310-424 (433)
192 3qwp_A SET and MYND domain-con 99.4 4.8E-12 1.6E-16 77.8 8.8 105 5-110 298-426 (429)
193 3ma5_A Tetratricopeptide repea 99.4 2.7E-12 9.4E-17 64.0 6.1 59 57-116 2-60 (100)
194 3ro3_A PINS homolog, G-protein 99.3 5.9E-12 2E-16 66.8 6.1 92 3-95 58-161 (164)
195 3e4b_A ALGK; tetratricopeptide 99.3 3.8E-11 1.3E-15 74.2 10.4 92 8-109 231-330 (452)
196 3mv2_B Coatomer subunit epsilo 99.3 2.8E-11 9.4E-16 71.4 9.1 109 4-116 110-230 (310)
197 2xm6_A Protein corresponding t 99.3 1.1E-10 3.7E-15 72.7 11.7 96 8-109 310-411 (490)
198 1klx_A Cysteine rich protein B 99.3 3.4E-10 1.2E-14 59.6 11.9 96 3-104 34-136 (138)
199 3u64_A Protein TP_0956; tetrat 99.3 7.9E-11 2.7E-15 68.6 9.6 91 6-96 175-273 (301)
200 2xm6_A Protein corresponding t 99.3 3.3E-10 1.1E-14 70.5 12.5 97 7-109 56-159 (490)
201 3ly7_A Transcriptional activat 99.2 3.4E-10 1.2E-14 68.1 11.3 109 6-116 211-329 (372)
202 1nzn_A CGI-135 protein, fissio 99.2 1.9E-09 6.4E-14 55.5 11.6 100 8-108 15-119 (126)
203 3mv2_B Coatomer subunit epsilo 99.2 1E-09 3.5E-14 64.8 10.5 106 3-112 145-270 (310)
204 4b4t_Q 26S proteasome regulato 99.1 3E-10 1E-14 69.3 8.2 55 5-59 15-86 (434)
205 2v5f_A Prolyl 4-hydroxylase su 99.1 5.7E-10 2E-14 56.0 7.7 67 4-70 15-88 (104)
206 3bee_A Putative YFRE protein; 99.0 1.9E-09 6.6E-14 53.0 6.9 53 10-62 25-77 (93)
207 4e6h_A MRNA 3'-END-processing 99.0 1.2E-08 4E-13 66.2 11.8 105 10-115 325-452 (679)
208 1b89_A Protein (clathrin heavy 99.0 5E-10 1.7E-14 68.9 4.9 74 29-116 123-196 (449)
209 4b4t_Q 26S proteasome regulato 99.0 2.8E-09 9.6E-14 65.0 8.2 111 4-115 105-234 (434)
210 3n71_A Histone lysine methyltr 99.0 1.9E-09 6.3E-14 67.5 7.3 82 34-116 315-412 (490)
211 3ly7_A Transcriptional activat 99.0 2.1E-08 7.3E-13 60.5 11.2 76 21-98 270-345 (372)
212 1xi4_A Clathrin heavy chain; a 99.0 9.2E-09 3.2E-13 70.8 10.3 77 8-95 1090-1166(1630)
213 3u64_A Protein TP_0956; tetrat 99.0 7.5E-09 2.6E-13 60.4 8.3 90 25-115 149-258 (301)
214 1pc2_A Mitochondria fission pr 98.9 7.5E-09 2.6E-13 55.1 7.0 65 7-71 48-114 (152)
215 3qww_A SET and MYND domain-con 98.9 2.4E-09 8.3E-14 66.1 5.4 77 39-116 309-401 (433)
216 1xi4_A Clathrin heavy chain; a 98.9 2.3E-08 8E-13 68.9 10.3 98 4-115 1115-1239(1630)
217 1b89_A Protein (clathrin heavy 98.9 2E-08 6.7E-13 62.0 8.3 95 5-109 159-253 (449)
218 4e6h_A MRNA 3'-END-processing 98.8 1.2E-07 4.1E-12 61.6 10.2 108 6-114 446-558 (679)
219 3qwp_A SET and MYND domain-con 98.8 1.1E-07 3.7E-12 58.8 9.4 80 36-116 295-390 (429)
220 3o48_A Mitochondria fission 1 98.7 6.3E-07 2.1E-11 46.5 10.3 99 8-108 21-123 (134)
221 1y8m_A FIS1; mitochondria, unk 98.7 2.7E-06 9.4E-11 44.6 11.9 98 8-107 20-121 (144)
222 4h7y_A Dual specificity protei 98.6 3.4E-07 1.2E-11 48.5 7.0 87 11-99 36-130 (161)
223 3ffl_A Anaphase-promoting comp 98.6 8.9E-07 3E-11 47.6 8.7 100 6-107 32-165 (167)
224 2uy1_A Cleavage stimulation fa 98.5 3.7E-06 1.2E-10 52.9 11.5 107 6-114 225-371 (493)
225 4g26_A Pentatricopeptide repea 98.5 1.6E-05 5.4E-10 50.2 13.5 110 6-116 82-194 (501)
226 3o48_A Mitochondria fission 1 98.5 2.4E-06 8.1E-11 44.3 7.9 66 6-71 55-121 (134)
227 1nzn_A CGI-135 protein, fissio 98.4 1.6E-06 5.5E-11 44.7 6.8 66 6-71 50-117 (126)
228 4h7y_A Dual specificity protei 98.4 2.4E-05 8.3E-10 41.5 11.8 39 76-114 73-111 (161)
229 1y8m_A FIS1; mitochondria, unk 98.3 7.9E-06 2.7E-10 42.9 8.0 66 6-71 54-120 (144)
230 4gns_B Protein CSD3, chitin bi 98.3 7.9E-06 2.7E-10 53.8 9.2 105 10-116 265-390 (754)
231 4g26_A Pentatricopeptide repea 98.2 0.00012 4E-09 46.3 13.0 113 3-116 35-159 (501)
232 2uy1_A Cleavage stimulation fa 98.2 3.9E-05 1.3E-09 48.4 10.8 103 6-114 298-401 (493)
233 3ffl_A Anaphase-promoting comp 98.2 7.7E-06 2.6E-10 44.1 5.9 86 30-116 22-141 (167)
234 1ya0_A SMG-7 transcript varian 98.2 6.2E-05 2.1E-09 47.5 10.6 79 30-109 154-232 (497)
235 1zbp_A Hypothetical protein VP 97.8 0.00073 2.5E-08 39.3 10.2 60 4-63 7-66 (273)
236 4gns_B Protein CSD3, chitin bi 97.7 0.00028 9.7E-09 46.7 8.4 59 30-89 339-397 (754)
237 2ff4_A Probable regulatory pro 97.5 0.0035 1.2E-07 38.5 10.6 83 8-91 129-233 (388)
238 1zbp_A Hypothetical protein VP 97.5 0.0027 9.3E-08 37.0 9.4 60 37-97 6-65 (273)
239 1ya0_A SMG-7 transcript varian 97.4 0.0024 8.1E-08 40.5 8.6 65 8-72 166-230 (497)
240 4b4t_R RPN7, 26S proteasome re 97.0 0.0024 8.1E-08 39.7 6.2 64 28-92 131-197 (429)
241 3spa_A Mtrpol, DNA-directed RN 97.0 0.025 8.7E-07 39.3 10.7 88 4-92 137-230 (1134)
242 3mkq_A Coatomer beta'-subunit; 96.9 0.015 5.1E-07 38.4 9.1 43 7-54 665-707 (814)
243 2ff4_A Probable regulatory pro 96.8 0.033 1.1E-06 34.2 10.3 77 39-116 126-224 (388)
244 3txn_A 26S proteasome regulato 96.8 0.025 8.6E-07 34.9 9.0 89 3-92 108-210 (394)
245 4fhn_B Nucleoporin NUP120; pro 96.8 0.041 1.4E-06 38.5 10.7 95 21-116 835-957 (1139)
246 3mkq_B Coatomer subunit alpha; 96.7 0.025 8.5E-07 31.0 9.7 47 5-56 16-62 (177)
247 3spa_A Mtrpol, DNA-directed RN 96.6 0.063 2.2E-06 37.4 10.5 84 29-113 128-216 (1134)
248 4b4t_R RPN7, 26S proteasome re 96.5 0.019 6.4E-07 35.8 7.3 90 4-94 141-239 (429)
249 3txn_A 26S proteasome regulato 96.3 0.075 2.6E-06 32.9 9.0 83 33-116 104-200 (394)
250 3kae_A CDC27, possible protein 96.1 0.068 2.3E-06 29.4 8.7 86 25-116 30-133 (242)
251 4b4t_P 26S proteasome regulato 95.9 0.16 5.4E-06 31.9 9.6 88 4-92 147-247 (445)
252 3mkq_B Coatomer subunit alpha; 95.6 0.12 4.1E-06 28.3 7.6 56 27-91 7-62 (177)
253 4b4t_S RPN3, 26S proteasome re 95.5 0.28 9.5E-06 31.6 10.8 68 28-96 231-303 (523)
254 3mkq_A Coatomer beta'-subunit; 95.1 0.11 3.6E-06 34.5 6.7 47 38-90 662-708 (814)
255 1qsa_A Protein (soluble lytic 94.1 0.7 2.4E-05 30.5 8.6 79 11-91 269-347 (618)
256 4b4t_P 26S proteasome regulato 93.2 0.96 3.3E-05 28.5 9.5 86 29-115 138-236 (445)
257 3t5x_A PCI domain-containing p 93.2 0.44 1.5E-05 26.7 5.7 32 30-61 16-47 (203)
258 3t5v_B Nuclear mRNA export pro 93.2 0.99 3.4E-05 28.7 7.8 89 7-96 139-254 (455)
259 3kae_A CDC27, possible protein 92.8 0.66 2.3E-05 25.7 12.4 86 7-98 46-149 (242)
260 1qsa_A Protein (soluble lytic 92.8 1.4 4.7E-05 29.2 10.3 106 8-115 228-337 (618)
261 4b4t_S RPN3, 26S proteasome re 92.4 0.19 6.5E-06 32.3 4.0 55 5-61 242-303 (523)
262 4fhn_B Nucleoporin NUP120; pro 92.3 1.1 3.7E-05 31.7 7.7 108 3-112 851-986 (1139)
263 1wy6_A Hypothetical protein ST 92.1 0.74 2.5E-05 24.5 5.9 57 37-94 100-156 (172)
264 3ax2_A Mitochondrial import re 91.2 0.6 2.1E-05 21.6 5.1 31 33-63 22-52 (73)
265 3t5x_A PCI domain-containing p 90.5 1.4 4.7E-05 24.7 6.3 34 62-96 14-47 (203)
266 4gq2_M Nucleoporin NUP120; bet 90.1 3.6 0.00012 28.7 12.3 79 18-97 830-932 (950)
267 2crb_A Nuclear receptor bindin 89.4 1 3.6E-05 21.9 4.0 28 28-55 15-42 (97)
268 2cfu_A SDSA1; SDS-hydrolase, l 89.4 2.3 7.9E-05 28.3 7.0 50 64-114 451-500 (658)
269 2wpv_A GET4, UPF0363 protein Y 88.9 2.5 8.7E-05 25.4 7.7 66 26-91 132-216 (312)
270 2ijq_A Hypothetical protein; s 88.9 1.7 5.9E-05 23.5 8.5 61 31-92 35-104 (161)
271 1wy6_A Hypothetical protein ST 88.0 2 6.7E-05 23.0 7.8 104 7-115 20-143 (172)
272 2ijq_A Hypothetical protein; s 87.7 2.1 7.3E-05 23.1 5.0 53 5-57 43-104 (161)
273 1om2_A Protein (mitochondrial 87.4 1.1 3.7E-05 21.9 3.5 32 32-63 24-55 (95)
274 3efz_A 14-3-3 protein; 14-3-3, 86.6 3 0.0001 24.6 5.5 49 44-92 168-226 (268)
275 2npm_A 14-3-3 domain containin 86.2 3.6 0.00012 24.2 7.0 48 45-92 173-227 (260)
276 2br9_A 14-3-3E, 14-3-3 protein 85.5 3.7 0.00013 23.7 6.8 47 45-91 147-201 (234)
277 3iqu_A 14-3-3 protein sigma; s 85.5 3.7 0.00013 23.7 6.8 48 44-91 149-204 (236)
278 1o9d_A 14-3-3-like protein C; 84.9 4.2 0.00014 23.9 6.8 48 45-92 152-207 (260)
279 2crb_A Nuclear receptor bindin 84.9 2.3 7.7E-05 20.7 4.7 29 62-91 15-43 (97)
280 3uzd_A 14-3-3 protein gamma; s 84.8 4.1 0.00014 23.7 6.8 47 45-91 148-202 (248)
281 3esl_A Checkpoint serine/threo 84.3 3.9 0.00013 23.0 6.7 69 24-94 76-146 (202)
282 3esl_A Checkpoint serine/threo 83.6 4.3 0.00015 22.9 8.3 52 10-61 95-148 (202)
283 2rpa_A Katanin P60 ATPase-cont 83.5 1.9 6.7E-05 20.2 3.2 27 31-57 15-41 (78)
284 4gq2_M Nucleoporin NUP120; bet 83.5 9.4 0.00032 26.8 8.9 52 34-90 816-867 (950)
285 2o8p_A 14-3-3 domain containin 83.3 4.7 0.00016 23.1 9.5 62 31-92 123-197 (227)
286 3t5v_B Nuclear mRNA export pro 82.8 1.9 6.6E-05 27.4 3.9 33 29-61 221-254 (455)
287 3ubw_A 14-3-3E, 14-3-3 protein 81.9 5.9 0.0002 23.3 6.8 47 45-91 173-227 (261)
288 3ax2_A Mitochondrial import re 81.6 2.8 9.6E-05 19.4 6.2 35 66-101 21-55 (73)
289 2w2u_A Hypothetical P60 katani 81.0 3.2 0.00011 19.7 3.5 18 38-55 29-46 (83)
290 3myv_A SUSD superfamily protei 79.7 7.7 0.00026 24.5 5.8 27 30-56 192-218 (454)
291 3kez_A Putative sugar binding 78.5 7.9 0.00027 24.5 5.7 27 30-56 198-224 (461)
292 2v6y_A AAA family ATPase, P60 77.7 4.3 0.00015 19.2 3.5 17 39-55 22-38 (83)
293 4a5x_A MITD1, MIT domain-conta 77.7 4.4 0.00015 19.3 3.7 22 35-56 23-44 (86)
294 1om2_A Protein (mitochondrial 77.6 4.8 0.00016 19.7 4.8 31 66-97 24-54 (95)
295 3bu8_A Telomeric repeat-bindin 77.5 2.2 7.6E-05 24.3 2.6 58 34-92 120-186 (235)
296 3re2_A Predicted protein; meni 77.3 11 0.00037 23.7 9.9 77 28-105 255-344 (472)
297 3mcx_A SUSD superfamily protei 77.1 9.1 0.00031 24.3 5.7 47 10-56 176-230 (477)
298 2cwy_A Hypothetical protein TT 77.0 4.9 0.00017 19.5 5.3 56 33-91 6-67 (94)
299 3lpz_A GET4 (YOR164C homolog); 76.0 11 0.00038 23.1 8.2 66 25-90 133-214 (336)
300 2cfu_A SDSA1; SDS-hydrolase, l 74.0 12 0.0004 25.1 5.7 45 30-74 451-495 (658)
301 3re2_A Predicted protein; meni 73.7 10 0.00035 23.8 4.9 43 13-55 276-323 (472)
302 3bqo_A Telomeric repeat-bindin 73.4 5 0.00017 22.6 3.3 38 34-71 123-160 (211)
303 2wvi_A Mitotic checkpoint seri 72.5 9.5 0.00032 20.7 9.1 74 14-94 43-127 (164)
304 3bqo_A Telomeric repeat-bindin 71.7 2.2 7.5E-05 24.0 1.7 40 3-42 126-165 (211)
305 3bu8_A Telomeric repeat-bindin 71.6 12 0.00041 21.5 8.4 36 73-109 125-160 (235)
306 3u84_A Menin; MLL, JUND, ledgf 71.6 17 0.00059 23.3 9.9 59 46-105 297-366 (550)
307 4a1g_A Mitotic checkpoint seri 71.5 9.7 0.00033 20.4 7.0 76 13-95 47-133 (152)
308 3lew_A SUSD-like carbohydrate 70.4 18 0.00063 23.2 6.5 27 30-56 205-231 (495)
309 3u84_A Menin; MLL, JUND, ledgf 69.8 14 0.00047 23.7 4.9 43 13-55 298-345 (550)
310 3snx_A SUSD homolog, putative 69.6 6.6 0.00023 24.9 3.7 29 29-57 192-220 (460)
311 3jq1_A SUSD superfamily protei 69.5 15 0.00051 23.5 5.3 47 10-56 154-208 (481)
312 2p58_C Putative type III secre 68.3 9.7 0.00033 19.1 7.6 73 10-89 23-95 (116)
313 1wfd_A Hypothetical protein 15 68.2 8.7 0.0003 18.5 3.5 17 39-55 26-42 (93)
314 2wvi_A Mitotic checkpoint seri 67.1 13 0.00045 20.2 7.1 51 13-63 79-131 (164)
315 2cpt_A SKD1 protein, vacuolar 64.9 12 0.00041 19.0 3.7 16 40-55 30-45 (117)
316 2uwj_G Type III export protein 64.8 12 0.0004 18.8 6.8 73 10-89 22-94 (115)
317 4b4t_O 26S proteasome regulato 64.5 23 0.00078 22.0 10.1 85 7-91 89-197 (393)
318 3myv_A SUSD superfamily protei 64.5 24 0.00083 22.3 6.7 30 62-92 190-219 (454)
319 3lvg_A Clathrin heavy chain 1; 63.2 0.13 4.3E-06 33.3 -4.6 95 4-108 180-274 (624)
320 4gq4_A Menin; tumor suppressor 62.6 23 0.00079 22.7 4.9 42 14-55 284-330 (489)
321 3kez_A Putative sugar binding 61.3 28 0.00097 22.1 6.3 30 62-92 196-225 (461)
322 2v6x_A Vacuolar protein sortin 60.4 12 0.00042 17.5 3.9 18 39-56 24-41 (85)
323 3qnk_A Putative lipoprotein; a 60.2 32 0.0011 22.2 5.8 27 30-56 184-210 (517)
324 2yhe_A SEC-alkyl sulfatase; hy 64.5 1.8 6.3E-05 28.9 0.0 49 65-114 464-512 (668)
325 2npu_A FKBP12-rapamycin comple 59.9 16 0.00056 18.9 5.1 74 33-110 45-123 (126)
326 3mcx_A SUSD superfamily protei 59.4 31 0.0011 21.9 7.2 44 48-92 180-231 (477)
327 2dl1_A Spartin; SPG20, MIT, st 58.1 16 0.00054 18.6 3.1 16 9-24 18-33 (116)
328 2e2a_A Protein (enzyme IIA); h 55.6 18 0.00062 18.0 3.6 31 25-55 17-47 (105)
329 2wpv_A GET4, UPF0363 protein Y 54.4 33 0.0011 20.7 8.1 21 95-115 132-152 (312)
330 3lew_A SUSD-like carbohydrate 54.4 40 0.0014 21.7 6.6 30 62-92 203-232 (495)
331 1wcr_A PTS system, N, N'-diace 54.1 19 0.00066 17.9 3.6 30 26-55 16-45 (103)
332 3ph0_C ASCG; type III secretio 53.7 14 0.00048 16.2 4.4 8 76-83 53-60 (61)
333 4gq4_A Menin; tumor suppressor 51.5 46 0.0016 21.4 10.4 78 28-106 262-352 (489)
334 3fap_B FRAP, FKBP12-rapamycin 50.0 22 0.00075 17.3 4.8 72 34-109 16-92 (94)
335 3k1s_A PTS system, cellobiose- 49.1 25 0.00085 17.7 3.6 29 26-54 20-48 (109)
336 3hdx_A SUSD homolog, SUSD supe 47.6 52 0.0018 21.0 6.3 28 30-57 199-226 (478)
337 3l8r_A PTCA, putative PTS syst 46.3 30 0.001 17.8 3.6 30 26-55 35-64 (120)
338 2ynq_A ESSB; membrane protein, 44.9 37 0.0013 18.4 5.8 75 8-89 22-99 (161)
339 3jq1_A SUSD superfamily protei 44.8 60 0.002 20.8 5.1 29 62-91 180-208 (481)
340 3hdx_A SUSD homolog, SUSD supe 42.7 53 0.0018 21.0 4.5 30 62-92 197-226 (478)
341 2xze_A STAM-binding protein; h 42.7 38 0.0013 17.9 3.7 26 30-55 42-67 (146)
342 3snx_A SUSD homolog, putative 41.9 47 0.0016 21.2 4.1 30 62-92 191-220 (460)
343 3eab_A Spastin; spastin, MIT, 41.8 29 0.001 16.7 2.5 13 42-54 33-45 (89)
344 3l22_A SUSD superfamily protei 40.2 34 0.0012 21.6 3.3 26 30-55 203-228 (441)
345 3i4g_A SUSD-like carbohydrate 39.3 78 0.0027 20.6 6.4 26 30-55 200-225 (528)
346 3qnk_A Putative lipoprotein; a 37.8 82 0.0028 20.4 6.6 30 62-92 182-211 (517)
347 4abx_A DNA repair protein RECN 37.0 51 0.0018 17.8 3.9 27 33-59 95-121 (175)
348 3s6n_M SurviVal motor neuron p 35.3 25 0.00084 13.7 2.2 14 79-92 18-31 (37)
349 2yhe_A SEC-alkyl sulfatase; hy 41.5 7.9 0.00027 26.0 0.0 43 32-74 465-507 (668)
350 3qtm_A Uncharacterized protein 32.8 83 0.0028 19.0 4.2 31 79-109 101-131 (346)
351 3jys_A SUSD superfamily protei 32.6 1E+02 0.0035 19.9 5.7 47 10-56 161-222 (499)
352 3mv2_A Coatomer subunit alpha; 31.8 91 0.0031 19.2 6.9 94 5-98 125-242 (325)
353 2wb7_A PT26-6P; extra chromoso 31.5 1.1E+02 0.0039 20.2 5.7 16 41-56 452-467 (526)
354 4gof_A Small glutamine-rich te 30.1 39 0.0013 14.4 2.6 19 78-96 29-47 (52)
355 2vkj_A TM1634; membrane protei 29.8 54 0.0019 15.9 3.8 27 65-92 56-82 (106)
356 2oc5_A Hypothetical protein; D 28.9 84 0.0029 17.8 5.5 55 45-103 47-101 (244)
357 2a9u_A Ubiquitin carboxyl-term 27.7 75 0.0025 16.8 3.7 35 30-64 44-81 (144)
358 3otn_A SUSD superfamily protei 27.7 1.2E+02 0.0042 19.4 5.0 27 30-56 190-225 (482)
359 3msv_A Nuclear import adaptor, 27.3 1.1E+02 0.0038 18.8 4.4 31 79-109 148-178 (393)
360 3o10_A Sacsin; all-helical dom 25.1 81 0.0028 16.4 4.0 14 8-21 4-17 (141)
361 3ckc_A SUSD; TPR repeat, carbo 25.0 1.4E+02 0.0049 19.2 5.9 46 11-56 170-231 (527)
362 3mkr_B Coatomer subunit alpha; 23.7 1.3E+02 0.0046 18.4 6.6 93 5-97 113-232 (320)
363 4aez_C MAD3, mitotic spindle c 22.4 1.2E+02 0.0042 17.5 10.5 73 15-94 98-181 (223)
364 3lxu_X Tripeptidyl-peptidase 2 21.5 2.7E+02 0.0094 21.2 8.7 36 75-111 1296-1331(1354)
365 3lpz_A GET4 (YOR164C homolog); 21.2 1.6E+02 0.0053 18.2 9.7 24 62-86 136-159 (336)
366 2ymb_A MITD1, MIT domain-conta 21.1 20 0.00069 21.1 0.0 16 7-22 36-51 (257)
367 2lxb_A Small glutamine-rich te 20.7 79 0.0027 14.7 2.6 21 78-98 34-54 (74)
No 1
>4gco_A Protein STI-1; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, tetratricopeptide repeat domain; 1.60A {Caenorhabditis elegans}
Probab=99.94 E-value=2.8e-25 Score=116.00 Aligned_cols=103 Identities=17% Similarity=0.159 Sum_probs=98.9
Q ss_pred ccchhcHHHHHHHHHHHHhhCCChhHHHHHHHHHHHhhcChhhHHHHHHHHhccCCCCHHHHHHHHHHHHHhcCCHHHHH
Q psy12719 4 PGDRERVEQSLKEFRNFVDTHSNVVEACTLFAQVLVDQEDFDGAEEYFNRSIRVDPENASLYVHRAMLMLQARGNVDEAI 83 (116)
Q Consensus 4 ~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~a~ 83 (116)
+.+.|+|++|++.|+++++.+|.++.++..+|.++...|++++|+..|+++++++|+++.+++.+|.++.. +|++++|+
T Consensus 23 ~~~~g~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~~~~a~~~lg~~~~~-~~~~~~A~ 101 (126)
T 4gco_A 23 YFKKGDYPTAMRHYNEAVKRDPENAILYSNRAACLTKLMEFQRALDDCDTCIRLDSKFIKGYIRKAACLVA-MREWSKAQ 101 (126)
T ss_dssp HHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHH-TTCHHHHH
T ss_pred HHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHhhHHHhhccHHHHHHHHHHHHHhhhhhhHHHHHHHHHHHH-CCCHHHHH
Confidence 56789999999999999999999999999999999999999999999999999999999999999999888 99999999
Q ss_pred HHHHHHHhcCCCcHHHHHHHHHHH
Q psy12719 84 KLIEKAISIDKSCMFAYETLGTIE 107 (116)
Q Consensus 84 ~~~~~~~~~~~~~~~~~~~l~~~~ 107 (116)
+.++++++++|+++.++..++.++
T Consensus 102 ~~~~~al~l~P~~~~a~~~l~~~l 125 (126)
T 4gco_A 102 RAYEDALQVDPSNEEAREGVRNCL 125 (126)
T ss_dssp HHHHHHHHHCTTCHHHHHHHHHHC
T ss_pred HHHHHHHHHCcCCHHHHHHHHHhc
Confidence 999999999999999999998764
No 2
>4ga2_A E3 SUMO-protein ligase ranbp2; TPR motif, nuclear pore complex component nucleocytoplasmic transport, transport protein; 0.95A {Pan troglodytes} PDB: 4ga0_A 4ga1_A*
Probab=99.94 E-value=1e-25 Score=120.80 Aligned_cols=112 Identities=12% Similarity=0.157 Sum_probs=94.4
Q ss_pred cccchhcHHHHHHHHHHHHhhCCChhHHHHHHHHHHHhhcChhhHHHHHHHHhccCCCCHHHHHHHHHHHHHhcCCHHHH
Q psy12719 3 VPGDRERVEQSLKEFRNFVDTHSNVVEACTLFAQVLVDQEDFDGAEEYFNRSIRVDPENASLYVHRAMLMLQARGNVDEA 82 (116)
Q Consensus 3 ~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~a 82 (116)
++...|++++|+..+++++..+|+++..++.+|.+|...|++++|+..|+++++++|+++.+|+.+|.++.. .|++++|
T Consensus 6 ~~~~~~~~e~ai~~~~~a~~~~p~~~~~~~~la~~y~~~~~~~~A~~~~~~al~~~p~~~~a~~~lg~~~~~-~~~~~~A 84 (150)
T 4ga2_A 6 MRRSKADVERYIASVQGSTPSPRQKSIKGFYFAKLYYEAKEYDLAKKYICTYINVQERDPKAHRFLGLLYEL-EENTDKA 84 (150)
T ss_dssp -CCCHHHHHHHHHHHHHHSCSHHHHHTTHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHH-TTCHHHH
T ss_pred HHHHcChHHHHHHHHHHhcccCcccHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHH-cCchHHH
Confidence 456778888888888888888888888888888888888888888888888888888888888888888777 7888888
Q ss_pred HHHHHHHHhcCCCcHHHHHHHHHHHHhhccccc
Q psy12719 83 IKLIEKAISIDKSCMFAYETLGTIEVQRTFVVL 115 (116)
Q Consensus 83 ~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~ 115 (116)
+..++++++.+|+++.++..+|.++...|++++
T Consensus 85 ~~~~~~al~~~p~~~~~~~~la~~~~~~~~~~~ 117 (150)
T 4ga2_A 85 VECYRRSVELNPTQKDLVLKIAELLCKNDVTDG 117 (150)
T ss_dssp HHHHHHHHHHCTTCHHHHHHHHHHHHHHCSSSS
T ss_pred HHHHHHHHHhCCCCHHHHHHHHHHHHHcCChHH
Confidence 888888888888888888888888888887754
No 3
>4ga2_A E3 SUMO-protein ligase ranbp2; TPR motif, nuclear pore complex component nucleocytoplasmic transport, transport protein; 0.95A {Pan troglodytes} PDB: 4ga0_A 4ga1_A*
Probab=99.92 E-value=2.9e-24 Score=115.12 Aligned_cols=109 Identities=16% Similarity=0.184 Sum_probs=102.0
Q ss_pred cccchhcHHHHHHHHHHHHhhCCChhHHHHHHHHHHHhhcChhhHHHHHHHHhccCCCCHHHHHHHHHHHHHhcCCHHHH
Q psy12719 3 VPGDRERVEQSLKEFRNFVDTHSNVVEACTLFAQVLVDQEDFDGAEEYFNRSIRVDPENASLYVHRAMLMLQARGNVDEA 82 (116)
Q Consensus 3 ~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~a 82 (116)
+|...|++++|++.|+++++.+|+++.+|..+|.++...|++++|+..|+++++++|+++.+++.+|.++.. .|++++|
T Consensus 40 ~y~~~~~~~~A~~~~~~al~~~p~~~~a~~~lg~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~la~~~~~-~~~~~~a 118 (150)
T 4ga2_A 40 LYYEAKEYDLAKKYICTYINVQERDPKAHRFLGLLYELEENTDKAVECYRRSVELNPTQKDLVLKIAELLCK-NDVTDGR 118 (150)
T ss_dssp HHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHH-HCSSSSH
T ss_pred HHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCchHHHHHHHHHHHHhCCCCHHHHHHHHHHHHH-cCChHHH
Confidence 456789999999999999999999999999999999999999999999999999999999999999999888 8999877
Q ss_pred HHH-HHHHHhcCCCcHHHHHHHHHHHHhhcc
Q psy12719 83 IKL-IEKAISIDKSCMFAYETLGTIEVQRTF 112 (116)
Q Consensus 83 ~~~-~~~~~~~~~~~~~~~~~l~~~~~~~~~ 112 (116)
.+. ++++++++|+++.++...+.++...|+
T Consensus 119 a~~~~~~al~l~P~~~~~~~l~~~ll~~~G~ 149 (150)
T 4ga2_A 119 AKYWVERAAKLFPGSPAVYKLKEQLLDCEGE 149 (150)
T ss_dssp HHHHHHHHHHHSTTCHHHHHHHHHHHHTCCC
T ss_pred HHHHHHHHHHhCcCCHHHHHHHHHHHHHhCc
Confidence 765 589999999999999999999988775
No 4
>3gyz_A Chaperone protein IPGC; asymmetric homodimer, tetratricopeptide repeat, TPR, chapero virulence; 2.15A {Shigella flexneri} PDB: 3gz1_A 3gz2_A 3ks2_A
Probab=99.91 E-value=4.2e-25 Score=118.48 Aligned_cols=90 Identities=16% Similarity=0.131 Sum_probs=45.5
Q ss_pred chhcHHHHHHHHHHHHhhCCChhHHHHHHHHHHHhhcChhhHHHHHHHHhccCCCCHHHHHHHHHHHHHhcCCHHHHHHH
Q psy12719 6 DRERVEQSLKEFRNFVDTHSNVVEACTLFAQVLVDQEDFDGAEEYFNRSIRVDPENASLYVHRAMLMLQARGNVDEAIKL 85 (116)
Q Consensus 6 ~~~~~~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~ 85 (116)
..|++++|+..|++++..+|+++.+|..+|.++...|++++|+..|++++.++|+++.+++++|.++.. +|++++|+..
T Consensus 48 ~~g~~~eA~~~~~~al~~~P~~~~~~~~lg~~~~~~g~~~~Ai~~~~~al~l~P~~~~~~~~lg~~~~~-lg~~~eA~~~ 126 (151)
T 3gyz_A 48 NKGRIEEAEVFFRFLCIYDFYNVDYIMGLAAIYQIKEQFQQAADLYAVAFALGKNDYTPVFHTGQCQLR-LKAPLKAKEC 126 (151)
T ss_dssp HTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSSSCCHHHHHHHHHHHH-TTCHHHHHHH
T ss_pred HcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHccHHHHHHHHHHHHhhCCCCcHHHHHHHHHHHH-cCCHHHHHHH
Confidence 344455555555555555555555555555555555555555555555555555555555555555444 4555555555
Q ss_pred HHHHHhcCCCc
Q psy12719 86 IEKAISIDKSC 96 (116)
Q Consensus 86 ~~~~~~~~~~~ 96 (116)
|+++++..|+.
T Consensus 127 ~~~al~l~~~~ 137 (151)
T 3gyz_A 127 FELVIQHSNDE 137 (151)
T ss_dssp HHHHHHHCCCH
T ss_pred HHHHHHhCCCH
Confidence 55555554443
No 5
>4gyw_A UDP-N-acetylglucosamine--peptide N- acetylglucosaminyltransferase 110 kDa subunit...; GT-B, glycosyltransferase, glcnacylation, transferase-peptid; HET: UDP NAG; 1.70A {Homo sapiens} PDB: 3pe3_A* 3pe4_A* 4ay5_A* 4ay6_A* 3tax_A* 4gyy_A* 4gz3_A* 4gz5_A* 4gz6_A*
Probab=99.91 E-value=1.2e-23 Score=135.39 Aligned_cols=112 Identities=19% Similarity=0.264 Sum_probs=86.0
Q ss_pred ccchhcHHHHHHHHHHHHhhCCChhHHHHHHHHHHHhhcChhhHHHHHHHHhccCCCCHHHHHHHHHHHHHhcCCHHHHH
Q psy12719 4 PGDRERVEQSLKEFRNFVDTHSNVVEACTLFAQVLVDQEDFDGAEEYFNRSIRVDPENASLYVHRAMLMLQARGNVDEAI 83 (116)
Q Consensus 4 ~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~a~ 83 (116)
+.++|++++|+..|+++++.+|++..++.++|.++...|++++|+..|+++++++|+++.+++++|.++.. +|++++|+
T Consensus 19 ~~~~G~~~eAi~~~~kAl~l~P~~~~a~~nLg~~l~~~g~~~eA~~~~~~Al~l~P~~~~a~~nLg~~l~~-~g~~~~A~ 97 (723)
T 4gyw_A 19 KREQGNIEEAVRLYRKALEVFPEFAAAHSNLASVLQQQGKLQEALMHYKEAIRISPTFADAYSNMGNTLKE-MQDVQGAL 97 (723)
T ss_dssp HHHTTCHHHHHHHHHHHHHHCSCCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHH-TTCHHHHH
T ss_pred HHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHH-cCCHHHHH
Confidence 45667777777777777777777777777777777777777777777777777777777777777777666 77777777
Q ss_pred HHHHHHHhcCCCcHHHHHHHHHHHHhhcccccC
Q psy12719 84 KLIEKAISIDKSCMFAYETLGTIEVQRTFVVLW 116 (116)
Q Consensus 84 ~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~a 116 (116)
+.++++++++|+++.++.++|.++..+|++++|
T Consensus 98 ~~~~kAl~l~P~~~~a~~~Lg~~~~~~g~~~eA 130 (723)
T 4gyw_A 98 QCYTRAIQINPAFADAHSNLASIHKDSGNIPEA 130 (723)
T ss_dssp HHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHH
T ss_pred HHHHHHHHhCCCCHHHHHHHHHHHHHcCCHHHH
Confidence 777777777777777777777777777777654
No 6
>2pl2_A Hypothetical conserved protein TTC0263; TPR, protein binding; 2.50A {Thermus thermophilus}
Probab=99.91 E-value=8.8e-24 Score=119.20 Aligned_cols=112 Identities=13% Similarity=0.021 Sum_probs=87.0
Q ss_pred ccchhcHHHHHHHHHHHHhhCCChhHHHHHHHHHHHhhcChhhHHHHHHHHhccCCCCHHHHHHHHHHHHHhc-------
Q psy12719 4 PGDRERVEQSLKEFRNFVDTHSNVVEACTLFAQVLVDQEDFDGAEEYFNRSIRVDPENASLYVHRAMLMLQAR------- 76 (116)
Q Consensus 4 ~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~~~~------- 76 (116)
+...|++++|+..|+++++.+|+++.++..+|.++...|++++|+..+++++..+|+++.+++.+|.++.. .
T Consensus 15 ~~~~g~~~~A~~~~~~al~~~p~~~~a~~~lg~~~~~~g~~~~A~~~~~~al~~~P~~~~a~~~lg~~~~~-~~~~~~~~ 93 (217)
T 2pl2_A 15 LYALGRYDAALTLFERALKENPQDPEALYWLARTQLKLGLVNPALENGKTLVARTPRYLGGYMVLSEAYVA-LYRQAEDR 93 (217)
T ss_dssp HHHTTCHHHHHHHHHHHHTTSSSCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHH-HHHTCSSH
T ss_pred HHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCcHHHHHHHHHHHHH-hhhhhhhh
Confidence 34567778888888888888888888888888888888888888888888888888887778888877666 7
Q ss_pred ----CCHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHhhcccccC
Q psy12719 77 ----GNVDEAIKLIEKAISIDKSCMFAYETLGTIEVQRTFVVLW 116 (116)
Q Consensus 77 ----~~~~~a~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~a 116 (116)
|++++|+..++++++.+|+++.++..+|.++...|++++|
T Consensus 94 ~~~~g~~~~A~~~~~~al~~~P~~~~~~~~lg~~~~~~g~~~~A 137 (217)
T 2pl2_A 94 ERGKGYLEQALSVLKDAERVNPRYAPLHLQRGLVYALLGERDKA 137 (217)
T ss_dssp HHHHHHHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHH
T ss_pred cccccCHHHHHHHHHHHHHhCcccHHHHHHHHHHHHHcCChHHH
Confidence 7788888888888888887777777788777777777653
No 7
>3urz_A Uncharacterized protein; tetratricopeptide repeats (TPR) containing protein, structur genomics, joint center for structural genomics, JCSG; HET: PG4; 2.19A {Bacteroides ovatus}
Probab=99.90 E-value=4e-23 Score=115.87 Aligned_cols=108 Identities=17% Similarity=0.231 Sum_probs=102.7
Q ss_pred ccchhcHHHHHHHHHHHHhhCCChhHHHHH----------------HHHHHHhhcChhhHHHHHHHHhccCCCCHHHHHH
Q psy12719 4 PGDRERVEQSLKEFRNFVDTHSNVVEACTL----------------FAQVLVDQEDFDGAEEYFNRSIRVDPENASLYVH 67 (116)
Q Consensus 4 ~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~----------------~~~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~ 67 (116)
+...|++++|+..|++++..+|+++.++.. +|.++...|++++|+..|+++++.+|+++.+++.
T Consensus 14 ~~~~g~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~~~~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~ 93 (208)
T 3urz_A 14 AIEAGQNGQAVSYFRQTIALNIDRTEMYYWTNVDKNSEISSKLATELALAYKKNRNYDKAYLFYKELLQKAPNNVDCLEA 93 (208)
T ss_dssp HHHTTCHHHHHHHHHHHHHHCHHHHHHHHHHHSCTTSHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHH
T ss_pred HHHCCCHHHHHHHHHHHHHhCCCChHHHHHhhhcchhhhhHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCHHHHHH
Confidence 456899999999999999999999999999 9999999999999999999999999999999999
Q ss_pred HHHHHHHhcCCHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHhhcc
Q psy12719 68 RAMLMLQARGNVDEAIKLIEKAISIDKSCMFAYETLGTIEVQRTF 112 (116)
Q Consensus 68 ~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~ 112 (116)
+|.++.. .|++++|+..++++++.+|+++.++..+|.++...|+
T Consensus 94 lg~~~~~-~g~~~~A~~~~~~al~~~P~~~~a~~~lg~~~~~~~~ 137 (208)
T 3urz_A 94 CAEMQVC-RGQEKDALRMYEKILQLEADNLAANIFLGNYYYLTAE 137 (208)
T ss_dssp HHHHHHH-HTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHH-cCCHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHhH
Confidence 9999888 8999999999999999999999999999999877654
No 8
>4gyw_A UDP-N-acetylglucosamine--peptide N- acetylglucosaminyltransferase 110 kDa subunit...; GT-B, glycosyltransferase, glcnacylation, transferase-peptid; HET: UDP NAG; 1.70A {Homo sapiens} PDB: 3pe3_A* 3pe4_A* 4ay5_A* 4ay6_A* 3tax_A* 4gyy_A* 4gz3_A* 4gz5_A* 4gz6_A*
Probab=99.90 E-value=1e-22 Score=131.09 Aligned_cols=113 Identities=19% Similarity=0.265 Sum_probs=108.6
Q ss_pred cccchhcHHHHHHHHHHHHhhCCChhHHHHHHHHHHHhhcChhhHHHHHHHHhccCCCCHHHHHHHHHHHHHhcCCHHHH
Q psy12719 3 VPGDRERVEQSLKEFRNFVDTHSNVVEACTLFAQVLVDQEDFDGAEEYFNRSIRVDPENASLYVHRAMLMLQARGNVDEA 82 (116)
Q Consensus 3 ~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~a 82 (116)
++.++|++++|+..|+++++++|+++.++.++|.++...|++++|++.|+++++++|+++.+++++|.++.. +|++++|
T Consensus 52 ~l~~~g~~~eA~~~~~~Al~l~P~~~~a~~nLg~~l~~~g~~~~A~~~~~kAl~l~P~~~~a~~~Lg~~~~~-~g~~~eA 130 (723)
T 4gyw_A 52 VLQQQGKLQEALMHYKEAIRISPTFADAYSNMGNTLKEMQDVQGALQCYTRAIQINPAFADAHSNLASIHKD-SGNIPEA 130 (723)
T ss_dssp HHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHH-TTCHHHH
T ss_pred HHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHH-cCCHHHH
Confidence 356789999999999999999999999999999999999999999999999999999999999999999887 9999999
Q ss_pred HHHHHHHHhcCCCcHHHHHHHHHHHHhhcccccC
Q psy12719 83 IKLIEKAISIDKSCMFAYETLGTIEVQRTFVVLW 116 (116)
Q Consensus 83 ~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~a 116 (116)
++.++++++++|+++.++.++|.++..+|++++|
T Consensus 131 i~~~~~Al~l~P~~~~a~~~L~~~l~~~g~~~~A 164 (723)
T 4gyw_A 131 IASYRTALKLKPDFPDAYCNLAHCLQIVCDWTDY 164 (723)
T ss_dssp HHHHHHHHHHCSCCHHHHHHHHHHHHHTTCCTTH
T ss_pred HHHHHHHHHhCCCChHHHhhhhhHHHhcccHHHH
Confidence 9999999999999999999999999999998764
No 9
>3gyz_A Chaperone protein IPGC; asymmetric homodimer, tetratricopeptide repeat, TPR, chapero virulence; 2.15A {Shigella flexneri} PDB: 3gz1_A 3gz2_A 3ks2_A
Probab=99.90 E-value=2.1e-22 Score=108.00 Aligned_cols=110 Identities=12% Similarity=0.071 Sum_probs=102.8
Q ss_pred chhcHHHHHHHHHHHHhhCCChhHHHHHHHHHHHhhcChhhHHHHHHHHhccCCCCHHHHHHHHHHHHHhcCCHHHHHHH
Q psy12719 6 DRERVEQSLKEFRNFVDTHSNVVEACTLFAQVLVDQEDFDGAEEYFNRSIRVDPENASLYVHRAMLMLQARGNVDEAIKL 85 (116)
Q Consensus 6 ~~~~~~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~ 85 (116)
..+++-.+...+.+++..+|+++.+++.+|.++...|++++|+..|++++..+|.++.+|+.+|.++.. .|++++|+..
T Consensus 14 ~l~~~~~~~~~l~~al~l~p~~~~~~~~lg~~~~~~g~~~eA~~~~~~al~~~P~~~~~~~~lg~~~~~-~g~~~~Ai~~ 92 (151)
T 3gyz_A 14 AVIDAINSGATLKDINAIPDDMMDDIYSYAYDFYNKGRIEEAEVFFRFLCIYDFYNVDYIMGLAAIYQI-KEQFQQAADL 92 (151)
T ss_dssp HHHHHHHTSCCTGGGCCSCHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHH-TTCHHHHHHH
T ss_pred HHHHHHHCCCCHHHHhCCCHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHH-HccHHHHHHH
Confidence 345566666778899999999999999999999999999999999999999999999999999999887 9999999999
Q ss_pred HHHHHhcCCCcHHHHHHHHHHHHhhcccccC
Q psy12719 86 IEKAISIDKSCMFAYETLGTIEVQRTFVVLW 116 (116)
Q Consensus 86 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~a 116 (116)
|++++.++|+++.+++++|.++..+|++++|
T Consensus 93 ~~~al~l~P~~~~~~~~lg~~~~~lg~~~eA 123 (151)
T 3gyz_A 93 YAVAFALGKNDYTPVFHTGQCQLRLKAPLKA 123 (151)
T ss_dssp HHHHHHHSSSCCHHHHHHHHHHHHTTCHHHH
T ss_pred HHHHHhhCCCCcHHHHHHHHHHHHcCCHHHH
Confidence 9999999999999999999999999999875
No 10
>2pl2_A Hypothetical conserved protein TTC0263; TPR, protein binding; 2.50A {Thermus thermophilus}
Probab=99.90 E-value=1.1e-22 Score=114.66 Aligned_cols=106 Identities=15% Similarity=0.107 Sum_probs=56.1
Q ss_pred hcHHHHHHHHHHHHhhCCChhHHHHHHHHHHHhhcChhhHHHHHHHHhccCCCCHHHHHHHHHHHHHhcCCHHHHHHHHH
Q psy12719 8 ERVEQSLKEFRNFVDTHSNVVEACTLFAQVLVDQEDFDGAEEYFNRSIRVDPENASLYVHRAMLMLQARGNVDEAIKLIE 87 (116)
Q Consensus 8 ~~~~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~ 87 (116)
|++++|+..++++++.+|+++.++..+|.++...|++++|+..|+++++++ +++.+++.+|.++.. .|++++|+..++
T Consensus 98 g~~~~A~~~~~~al~~~P~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~-~~~~~~~~la~~~~~-~g~~~~A~~~~~ 175 (217)
T 2pl2_A 98 GYLEQALSVLKDAERVNPRYAPLHLQRGLVYALLGERDKAEASLKQALALE-DTPEIRSALAELYLS-MGRLDEALAQYA 175 (217)
T ss_dssp HHHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHC-CCHHHHHHHHHHHHH-HTCHHHHHHHHH
T ss_pred cCHHHHHHHHHHHHHhCcccHHHHHHHHHHHHHcCChHHHHHHHHHHHhcc-cchHHHHHHHHHHHH-cCCHHHHHHHHH
Confidence 555555555555555555555555555555555555555555555555555 555555555555444 555555555555
Q ss_pred HHHhcCCCcHHHHHHHHHHHHhhccccc
Q psy12719 88 KAISIDKSCMFAYETLGTIEVQRTFVVL 115 (116)
Q Consensus 88 ~~~~~~~~~~~~~~~l~~~~~~~~~~~~ 115 (116)
++++.+|+++.++..++.++...|++++
T Consensus 176 ~al~~~P~~~~~~~~la~~~~~~g~~~~ 203 (217)
T 2pl2_A 176 KALEQAPKDLDLRVRYASALLLKGKAEE 203 (217)
T ss_dssp HHHHHSTTCHHHHHHHHHHHTC------
T ss_pred HHHHhCCCChHHHHHHHHHHHHccCHHH
Confidence 5555555555555555555555555554
No 11
>4gco_A Protein STI-1; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, tetratricopeptide repeat domain; 1.60A {Caenorhabditis elegans}
Probab=99.89 E-value=1.1e-22 Score=106.17 Aligned_cols=97 Identities=18% Similarity=0.196 Sum_probs=90.9
Q ss_pred HHHhhCCChhHHHHHHHHHHHhhcChhhHHHHHHHHhccCCCCHHHHHHHHHHHHHhcCCHHHHHHHHHHHHhcCCCcHH
Q psy12719 19 NFVDTHSNVVEACTLFAQVLVDQEDFDGAEEYFNRSIRVDPENASLYVHRAMLMLQARGNVDEAIKLIEKAISIDKSCMF 98 (116)
Q Consensus 19 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~ 98 (116)
++..++|+.+..+..+|..++..|++++|+..|+++++.+|.++.+++++|.++.. +|++++|+..++++++++|+++.
T Consensus 4 r~a~inP~~a~~~~~~G~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~~-~~~~~~A~~~~~~al~~~p~~~~ 82 (126)
T 4gco_A 4 RLAYINPELAQEEKNKGNEYFKKGDYPTAMRHYNEAVKRDPENAILYSNRAACLTK-LMEFQRALDDCDTCIRLDSKFIK 82 (126)
T ss_dssp ---CCCHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHH-TTCHHHHHHHHHHHHHHCTTCHH
T ss_pred HHHHHCHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHhhHHHh-hccHHHHHHHHHHHHHhhhhhhH
Confidence 44568899999999999999999999999999999999999999999999999888 99999999999999999999999
Q ss_pred HHHHHHHHHHhhcccccC
Q psy12719 99 AYETLGTIEVQRTFVVLW 116 (116)
Q Consensus 99 ~~~~l~~~~~~~~~~~~a 116 (116)
+|..+|.++..+|++++|
T Consensus 83 a~~~lg~~~~~~~~~~~A 100 (126)
T 4gco_A 83 GYIRKAACLVAMREWSKA 100 (126)
T ss_dssp HHHHHHHHHHHTTCHHHH
T ss_pred HHHHHHHHHHHCCCHHHH
Confidence 999999999999998865
No 12
>3upv_A Heat shock protein STI1; TPR-fold, adaptor protein for HSP70 and HSP90, C-terminal PA HSP70, peptide binding protein; 1.60A {Saccharomyces cerevisiae}
Probab=99.89 E-value=7.5e-22 Score=102.65 Aligned_cols=105 Identities=15% Similarity=0.144 Sum_probs=99.6
Q ss_pred ccchhcHHHHHHHHHHHHhhCCChhHHHHHHHHHHHhhcChhhHHHHHHHHhccCCCCHHHHHHHHHHHHHhcCCHHHHH
Q psy12719 4 PGDRERVEQSLKEFRNFVDTHSNVVEACTLFAQVLVDQEDFDGAEEYFNRSIRVDPENASLYVHRAMLMLQARGNVDEAI 83 (116)
Q Consensus 4 ~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~a~ 83 (116)
+...|++++|+..|++++..+|+++.++..+|.++...|++++|+..+++++.++|+++.+++.+|.++.. .|++++|+
T Consensus 14 ~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~lg~~~~~-~~~~~~A~ 92 (126)
T 3upv_A 14 YFTKSDWPNAVKAYTEMIKRAPEDARGYSNRAAALAKLMSFPEAIADCNKAIEKDPNFVRAYIRKATAQIA-VKEYASAL 92 (126)
T ss_dssp HHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHH-TTCHHHHH
T ss_pred HHHhcCHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHhcCHHHHHHHHHHHHHhCCCcHHHHHHHHHHHHH-HhCHHHHH
Confidence 45789999999999999999999999999999999999999999999999999999999999999999888 99999999
Q ss_pred HHHHHHHhcC------CCcHHHHHHHHHHHHh
Q psy12719 84 KLIEKAISID------KSCMFAYETLGTIEVQ 109 (116)
Q Consensus 84 ~~~~~~~~~~------~~~~~~~~~l~~~~~~ 109 (116)
..+++++..+ |+++.++..++.+...
T Consensus 93 ~~~~~al~~~p~~~~~p~~~~~~~~l~~~~~~ 124 (126)
T 3upv_A 93 ETLDAARTKDAEVNNGSSAREIDQLYYKASQQ 124 (126)
T ss_dssp HHHHHHHHHHHHHHTTTTHHHHHHHHHHHHHH
T ss_pred HHHHHHHHhCcccCCchhHHHHHHHHHHHHHh
Confidence 9999999999 9999999988887654
No 13
>3vtx_A MAMA; tetratricopeptide repeats (TPR) containing protein, peptide protein, protein binding; 1.75A {Candidatus magnetobacterium bavaricum} PDB: 3vty_A
Probab=99.89 E-value=9e-22 Score=108.09 Aligned_cols=112 Identities=19% Similarity=0.248 Sum_probs=87.9
Q ss_pred ccchhcHHHHHHHHHHHHhhCCChhHHHHHHHHHHHhhcChhhHHHHHHHHhccC-------------------------
Q psy12719 4 PGDRERVEQSLKEFRNFVDTHSNVVEACTLFAQVLVDQEDFDGAEEYFNRSIRVD------------------------- 58 (116)
Q Consensus 4 ~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~a~~~~------------------------- 58 (116)
+...|++++|++.|+++++.+|+++.++..+|.++...|++++|+..+.+++...
T Consensus 15 ~~~~g~~~~A~~~~~~al~~~p~~~~~~~~la~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ 94 (184)
T 3vtx_A 15 KRTKGDFDGAIRAYKKVLKADPNNVETLLKLGKTYMDIGLPNDAIESLKKFVVLDTTSAEAYYILGSANFMIDEKQAAID 94 (184)
T ss_dssp HHHHTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHTTCHHHHHH
T ss_pred HHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHhcCchhHHHHHHHHHHHHHcCCHHHHHH
Confidence 4567889999999999999999998888888888888888877777777766555
Q ss_pred ---------CCCHHHHHHHHHHHHHhcCCHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHhhcccccC
Q psy12719 59 ---------PENASLYVHRAMLMLQARGNVDEAIKLIEKAISIDKSCMFAYETLGTIEVQRTFVVLW 116 (116)
Q Consensus 59 ---------~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~a 116 (116)
|.+..++..+|.++.. .|++++|++.++++++.+|+++.++..+|.++..+|++++|
T Consensus 95 ~~~~a~~~~~~~~~~~~~lg~~~~~-~g~~~~A~~~~~~~l~~~p~~~~~~~~lg~~~~~~g~~~~A 160 (184)
T 3vtx_A 95 ALQRAIALNTVYADAYYKLGLVYDS-MGEHDKAIEAYEKTISIKPGFIRAYQSIGLAYEGKGLRDEA 160 (184)
T ss_dssp HHHHHHHHCTTCHHHHHHHHHHHHH-TTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHH
T ss_pred HHHHHHHhCccchHHHHHHHHHHHH-hCCchhHHHHHHHHHHhcchhhhHHHHHHHHHHHCCCHHHH
Confidence 4455566677777666 78888888888888888888888888888888888877654
No 14
>2h6f_A Protein farnesyltransferase/geranylgeranyltransferase type I alpha subunit; ftase, farnesyltransferase, farnesyl transferase, prenyltransferase, CAAX, RAS, lipid modification, prenylation; HET: SUC FAR; 1.50A {Homo sapiens} SCOP: a.118.6.1 PDB: 1jcq_A* 1ld7_A* 1mzc_A* 1s63_A* 1sa4_A* 1tn6_A* 1ld8_A* 2h6g_A* 2h6h_A* 2h6i_A* 2iej_A* 3e37_A* 2f0y_A* 3ksl_A* 2zir_A* 2zis_A* 1o5m_A* 3ksq_A* 1o1t_A* 1o1s_A* ...
Probab=99.89 E-value=1.6e-22 Score=122.35 Aligned_cols=109 Identities=15% Similarity=0.198 Sum_probs=74.4
Q ss_pred chhcHHHHHHHHHHHHhhCCChhHHHHHHHHHHHhhcC-hhhHHHHHHHHhccCCCCHHHHHHHHHHHHHhcCCHHHHHH
Q psy12719 6 DRERVEQSLKEFRNFVDTHSNVVEACTLFAQVLVDQED-FDGAEEYFNRSIRVDPENASLYVHRAMLMLQARGNVDEAIK 84 (116)
Q Consensus 6 ~~~~~~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ 84 (116)
..|++++|+..+++++..+|++..+|..+|.++...|+ +++|+..|++++.++|++..+|+++|.++.. .|++++|+.
T Consensus 109 ~~g~~~~Al~~~~~al~l~P~~~~a~~~~g~~l~~~g~d~~eAl~~~~~al~l~P~~~~a~~~~g~~~~~-~g~~~eAl~ 187 (382)
T 2h6f_A 109 RDERSERAFKLTRDAIELNAANYTVWHFRRVLLKSLQKDLHEEMNYITAIIEEQPKNYQVWHHRRVLVEW-LRDPSQELE 187 (382)
T ss_dssp HTCCCHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHH-HTCCTTHHH
T ss_pred HCCChHHHHHHHHHHHHhCccCHHHHHHHHHHHHHcccCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHH-ccCHHHHHH
Confidence 34566667777777777777776677777777666665 7777777777777777776677777766555 666677777
Q ss_pred HHHHHHhcCCCcHHHHHHHHHHHHhhccccc
Q psy12719 85 LIEKAISIDKSCMFAYETLGTIEVQRTFVVL 115 (116)
Q Consensus 85 ~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~ 115 (116)
.+++++.++|++..+|..+|.++..+|++++
T Consensus 188 ~~~kal~ldP~~~~a~~~lg~~~~~~g~~~e 218 (382)
T 2h6f_A 188 FIADILNQDAKNYHAWQHRQWVIQEFKLWDN 218 (382)
T ss_dssp HHHHHHHHCTTCHHHHHHHHHHHHHHTCCTT
T ss_pred HHHHHHHhCccCHHHHHHHHHHHHHcCChHH
Confidence 7777776667666666666666666666654
No 15
>2vgx_A Chaperone SYCD; alternative dimer assembly, tetratricopeptide repeat, type III secretion; HET: MLY; 1.95A {Yersinia enterocolitica} SCOP: k.38.1.1 PDB: 2vgx_B* 2vgy_A*
Probab=99.89 E-value=8.6e-23 Score=109.21 Aligned_cols=103 Identities=14% Similarity=0.025 Sum_probs=84.2
Q ss_pred ccchhcHHHHHHHHHHHHhhCCChhHHHHHHHHHHHhhcChhhHHHHHHHHhccCCCCHHHHHHHHHHHHHhcCCHHHHH
Q psy12719 4 PGDRERVEQSLKEFRNFVDTHSNVVEACTLFAQVLVDQEDFDGAEEYFNRSIRVDPENASLYVHRAMLMLQARGNVDEAI 83 (116)
Q Consensus 4 ~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~a~ 83 (116)
+...|++++|+..|++++..+|.++.+|..+|.++...|++++|+..|++++.++|+++.+++.+|.++.. .|++++|+
T Consensus 31 ~~~~g~~~~A~~~~~~al~~~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~l~p~~~~~~~~lg~~~~~-~g~~~~A~ 109 (148)
T 2vgx_A 31 QYQSGXYEDAHXVFQALCVLDHYDSRFFLGLGACRQAMGQYDLAIHSYSYGAVMDIXEPRFPFHAAECLLQ-XGELAEAE 109 (148)
T ss_dssp HHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSTTCTHHHHHHHHHHHH-TTCHHHHH
T ss_pred HHHcCChHHHHHHHHHHHHcCcccHHHHHHHHHHHHHHhhHHHHHHHHHHHHhcCCCCchHHHHHHHHHHH-cCCHHHHH
Confidence 45678888888888888888888888888888888888888888888888888888888888888888777 88888888
Q ss_pred HHHHHHHhcCCCcHHHHHHHHHHH
Q psy12719 84 KLIEKAISIDKSCMFAYETLGTIE 107 (116)
Q Consensus 84 ~~~~~~~~~~~~~~~~~~~l~~~~ 107 (116)
..++++++.+|+++........+.
T Consensus 110 ~~~~~al~~~p~~~~~~~~~~~~~ 133 (148)
T 2vgx_A 110 SGLFLAQELIANXPEFXELSTRVS 133 (148)
T ss_dssp HHHHHHHHHHTTCGGGHHHHHHHH
T ss_pred HHHHHHHHHCcCCCcchHHHHHHH
Confidence 888888888887665544444433
No 16
>2vgx_A Chaperone SYCD; alternative dimer assembly, tetratricopeptide repeat, type III secretion; HET: MLY; 1.95A {Yersinia enterocolitica} SCOP: k.38.1.1 PDB: 2vgx_B* 2vgy_A*
Probab=99.88 E-value=1.1e-21 Score=104.90 Aligned_cols=104 Identities=12% Similarity=0.001 Sum_probs=97.9
Q ss_pred HHHHHHHHHHhhCCChhHHHHHHHHHHHhhcChhhHHHHHHHHhccCCCCHHHHHHHHHHHHHhcCCHHHHHHHHHHHHh
Q psy12719 12 QSLKEFRNFVDTHSNVVEACTLFAQVLVDQEDFDGAEEYFNRSIRVDPENASLYVHRAMLMLQARGNVDEAIKLIEKAIS 91 (116)
Q Consensus 12 ~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~ 91 (116)
.+...|++++..+|++..+++.+|.++...|++++|+..|++++..+|.++.+|+.+|.++.. .|++++|+..+++++.
T Consensus 5 ~~~~~~~~al~~~p~~~~~~~~~g~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~lg~~~~~-~g~~~~A~~~~~~al~ 83 (148)
T 2vgx_A 5 SGGGTIAMLNEISSDTLEQLYSLAFNQYQSGXYEDAHXVFQALCVLDHYDSRFFLGLGACRQA-MGQYDLAIHSYSYGAV 83 (148)
T ss_dssp -CCCSHHHHTTCCHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHH-TTCHHHHHHHHHHHHH
T ss_pred chhhhHHHHHcCCHhhHHHHHHHHHHHHHcCChHHHHHHHHHHHHcCcccHHHHHHHHHHHHH-HhhHHHHHHHHHHHHh
Confidence 334568899999999999999999999999999999999999999999999999999999887 9999999999999999
Q ss_pred cCCCcHHHHHHHHHHHHhhcccccC
Q psy12719 92 IDKSCMFAYETLGTIEVQRTFVVLW 116 (116)
Q Consensus 92 ~~~~~~~~~~~l~~~~~~~~~~~~a 116 (116)
.+|+++.+++.+|.++...|++++|
T Consensus 84 l~p~~~~~~~~lg~~~~~~g~~~~A 108 (148)
T 2vgx_A 84 MDIXEPRFPFHAAECLLQXGELAEA 108 (148)
T ss_dssp HSTTCTHHHHHHHHHHHHTTCHHHH
T ss_pred cCCCCchHHHHHHHHHHHcCCHHHH
Confidence 9999999999999999999998864
No 17
>2xcb_A PCRH, regulatory protein PCRH; protein transport, bacterial toxin, type III secretion, protein binding; 1.85A {Pseudomonas aeruginosa} PDB: 2xcc_A
Probab=99.88 E-value=7.3e-22 Score=104.78 Aligned_cols=106 Identities=11% Similarity=0.003 Sum_probs=92.5
Q ss_pred ccchhcHHHHHHHHHHHHhhCCChhHHHHHHHHHHHhhcChhhHHHHHHHHhccCCCCHHHHHHHHHHHHHhcCCHHHHH
Q psy12719 4 PGDRERVEQSLKEFRNFVDTHSNVVEACTLFAQVLVDQEDFDGAEEYFNRSIRVDPENASLYVHRAMLMLQARGNVDEAI 83 (116)
Q Consensus 4 ~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~a~ 83 (116)
+...|++++|+..|++++..+|.++.+|..+|.++...|++++|+.+|++++..+|+++.+++.+|.++.. .|++++|+
T Consensus 28 ~~~~g~~~~A~~~~~~al~~~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~lg~~~~~-~g~~~~A~ 106 (142)
T 2xcb_A 28 QYQAGKWDDAQKIFQALCMLDHYDARYFLGLGACRQSLGLYEQALQSYSYGALMDINEPRFPFHAAECHLQ-LGDLDGAE 106 (142)
T ss_dssp HHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCTHHHHHHHHHHHH-TTCHHHHH
T ss_pred HHHHccHHHHHHHHHHHHHhCCccHHHHHHHHHHHHHHhhHHHHHHHHHHHHhcCCCCcHHHHHHHHHHHH-cCCHHHHH
Confidence 45678999999999999999999999999999999999999999999999999999999999999999887 89999999
Q ss_pred HHHHHHHhcCCCcHHHHHHHHHHHHhh
Q psy12719 84 KLIEKAISIDKSCMFAYETLGTIEVQR 110 (116)
Q Consensus 84 ~~~~~~~~~~~~~~~~~~~l~~~~~~~ 110 (116)
..+++++..+|+++........+....
T Consensus 107 ~~~~~al~~~p~~~~~~~~~~~~~~~l 133 (142)
T 2xcb_A 107 SGFYSARALAAAQPAHEALAARAGAML 133 (142)
T ss_dssp HHHHHHHHHHHTCGGGHHHHHHHHHHH
T ss_pred HHHHHHHHhCCCCcchHHHHHHHHHHH
Confidence 999999999888766555555554433
No 18
>4i17_A Hypothetical protein; TPR repeats protein, structural genomics, joint center for S genomics, JCSG, protein structure initiative; HET: MSE; 1.83A {Bacteroides fragilis}
Probab=99.88 E-value=1.5e-21 Score=110.39 Aligned_cols=112 Identities=12% Similarity=0.122 Sum_probs=105.3
Q ss_pred ccchhcHHHHHHHHHHHHhhCC-ChhHHHHHHHHHHHhhcChhhHHHHHHHHhccCCCCHHHHHHHHHHHHHhcCCHHHH
Q psy12719 4 PGDRERVEQSLKEFRNFVDTHS-NVVEACTLFAQVLVDQEDFDGAEEYFNRSIRVDPENASLYVHRAMLMLQARGNVDEA 82 (116)
Q Consensus 4 ~~~~~~~~~A~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~a 82 (116)
+...|++++|+..|++++..+| .+..++..+|.++...|++++|+..+++++..+|.++.++..+|.++.. .|++++|
T Consensus 17 ~~~~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~l~~~~~~-~~~~~~A 95 (228)
T 4i17_A 17 ALNAKNYAVAFEKYSEYLKLTNNQDSVTAYNCGVCADNIKKYKEAADYFDIAIKKNYNLANAYIGKSAAYRD-MKNNQEY 95 (228)
T ss_dssp HHHTTCHHHHHHHHHHHHHHTTTCCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTTCSHHHHHHHHHHHHHH-TTCHHHH
T ss_pred HHHccCHHHHHHHHHHHHhccCCCCcHHHHHHHHHHHHhhcHHHHHHHHHHHHHhCcchHHHHHHHHHHHHH-cccHHHH
Confidence 4578999999999999999998 8888999999999999999999999999999999999999999999888 8999999
Q ss_pred HHHHHHHHhcCCCcH-------HHHHHHHHHHHhhcccccC
Q psy12719 83 IKLIEKAISIDKSCM-------FAYETLGTIEVQRTFVVLW 116 (116)
Q Consensus 83 ~~~~~~~~~~~~~~~-------~~~~~l~~~~~~~~~~~~a 116 (116)
+..++++++.+|+++ .++..+|.++...|++++|
T Consensus 96 ~~~~~~al~~~p~~~~~~~~~~~~~~~~g~~~~~~~~~~~A 136 (228)
T 4i17_A 96 IATLTEGIKAVPGNATIEKLYAIYYLKEGQKFQQAGNIEKA 136 (228)
T ss_dssp HHHHHHHHHHSTTCHHHHHHHHHHHHHHHHHHHHTTCHHHH
T ss_pred HHHHHHHHHHCCCcHHHHHHHHHHHHHHhHHHHHhccHHHH
Confidence 999999999999998 6699999999999988764
No 19
>2vyi_A SGTA protein; chaperone, TPR repeat, phosphoprotein, tetratricopeptide repeat protein, HOST-virus interaction; 2.4A {Homo sapiens} SCOP: k.38.1.1
Probab=99.88 E-value=6.2e-21 Score=98.98 Aligned_cols=110 Identities=15% Similarity=0.145 Sum_probs=104.8
Q ss_pred ccchhcHHHHHHHHHHHHhhCCChhHHHHHHHHHHHhhcChhhHHHHHHHHhccCCCCHHHHHHHHHHHHHhcCCHHHHH
Q psy12719 4 PGDRERVEQSLKEFRNFVDTHSNVVEACTLFAQVLVDQEDFDGAEEYFNRSIRVDPENASLYVHRAMLMLQARGNVDEAI 83 (116)
Q Consensus 4 ~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~a~ 83 (116)
+...|++++|+..+++++...|+++.++..+|.++...|++++|+..+.+++..+|.++.+++.+|.++.. .|++++|+
T Consensus 22 ~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~A~ 100 (131)
T 2vyi_A 22 QMKVENFEAAVHFYGKAIELNPANAVYFCNRAAAYSKLGNYAGAVQDCERAICIDPAYSKAYGRMGLALSS-LNKHVEAV 100 (131)
T ss_dssp HHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHH-TTCHHHHH
T ss_pred HHHccCHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHhhchHHHHHHHHHHHhcCccCHHHHHHHHHHHHH-hCCHHHHH
Confidence 45678999999999999999999999999999999999999999999999999999999999999999888 89999999
Q ss_pred HHHHHHHhcCCCcHHHHHHHHHHHHhhcccc
Q psy12719 84 KLIEKAISIDKSCMFAYETLGTIEVQRTFVV 114 (116)
Q Consensus 84 ~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~ 114 (116)
..+++++..+|+++.++..++.++...|+++
T Consensus 101 ~~~~~~~~~~p~~~~~~~~l~~~~~~~~~~~ 131 (131)
T 2vyi_A 101 AYYKKALELDPDNETYKSNLKIAELKLREAP 131 (131)
T ss_dssp HHHHHHHHHSTTCHHHHHHHHHHHHHHTTCC
T ss_pred HHHHHHHhcCccchHHHHHHHHHHHHHhcCC
Confidence 9999999999999999999999999998864
No 20
>3sz7_A HSC70 cochaperone (SGT); TPR domain, GET4, GET5, GET3, MDY2, SSA1, SSE1, chaperone regulator; 1.72A {Aspergillus fumigatus}
Probab=99.88 E-value=1.9e-21 Score=105.27 Aligned_cols=104 Identities=12% Similarity=0.052 Sum_probs=96.1
Q ss_pred cccchhcHHHHHHHHHHHHhhCCChhHHHHHHHHHHHhhcChhhHHHHHHHHhccCCCCHHHHHHHHHHHHHhcCCHHHH
Q psy12719 3 VPGDRERVEQSLKEFRNFVDTHSNVVEACTLFAQVLVDQEDFDGAEEYFNRSIRVDPENASLYVHRAMLMLQARGNVDEA 82 (116)
Q Consensus 3 ~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~a 82 (116)
.+...|++++|+..|++++..+|+++.++..+|.++...|++++|+..|++++.++|+++.+++.+|.++.. .|++++|
T Consensus 20 ~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~lg~~~~~-~g~~~~A 98 (164)
T 3sz7_A 20 AAMARKEYSKAIDLYTQALSIAPANPIYLSNRAAAYSASGQHEKAAEDAELATVVDPKYSKAWSRLGLARFD-MADYKGA 98 (164)
T ss_dssp HHHHTTCHHHHHHHHHHHHHHSTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHH-TTCHHHH
T ss_pred HHHHcCCHHHHHHHHHHHHHhCCcCHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHH-ccCHHHH
Confidence 345789999999999999999999999999999999999999999999999999999999999999999888 9999999
Q ss_pred HHHHHHHHhcCCCcHHHHHHHHHHH
Q psy12719 83 IKLIEKAISIDKSCMFAYETLGTIE 107 (116)
Q Consensus 83 ~~~~~~~~~~~~~~~~~~~~l~~~~ 107 (116)
+..+++++..+|+++.++...+...
T Consensus 99 ~~~~~~al~~~p~~~~~~~~~~l~~ 123 (164)
T 3sz7_A 99 KEAYEKGIEAEGNGGSDAMKRGLET 123 (164)
T ss_dssp HHHHHHHHHHHSSSCCHHHHHHHHH
T ss_pred HHHHHHHHHhCCCchHHHHHHHHHH
Confidence 9999999999999988666555543
No 21
>3rkv_A Putative peptidylprolyl isomerase; structural genomics, APC102156, PSI-biology, midwest center structural genomics, MCSG; 2.41A {Caenorhabditis elegans}
Probab=99.87 E-value=2.6e-21 Score=104.55 Aligned_cols=110 Identities=12% Similarity=0.135 Sum_probs=100.5
Q ss_pred ccchhcHHHHHHHHHHHHhh------------------CCChhHHHHHHHHHHHhhcChhhHHHHHHHHhccCCCCHHHH
Q psy12719 4 PGDRERVEQSLKEFRNFVDT------------------HSNVVEACTLFAQVLVDQEDFDGAEEYFNRSIRVDPENASLY 65 (116)
Q Consensus 4 ~~~~~~~~~A~~~~~~~~~~------------------~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~ 65 (116)
+...|+|++|+..|.+++.. +|....++.++|.++...|++++|+..+++++.++|.++.++
T Consensus 21 ~~~~~~~~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~~~~~~~~A~~~~~~al~~~p~~~~a~ 100 (162)
T 3rkv_A 21 LFVQKDYKEAIDAYRDALTRLDTLILREKPGEPEWVELDRKNIPLYANMSQCYLNIGDLHEAEETSSEVLKREETNEKAL 100 (162)
T ss_dssp HHHTTCHHHHHHHHHHHHHHHHHHHHTSCTTSHHHHHHHHTHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHSTTCHHHH
T ss_pred HHHcCCHHHHHHHHHHHHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHHHHHhcCcHHHHHHHHHHHHhcCCcchHHH
Confidence 45679999999999999999 677778999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhcCCHHHHHHHHHHHHhcCCCcH-HHHHHHHHHHHhhcccc
Q psy12719 66 VHRAMLMLQARGNVDEAIKLIEKAISIDKSCM-FAYETLGTIEVQRTFVV 114 (116)
Q Consensus 66 ~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~-~~~~~l~~~~~~~~~~~ 114 (116)
+.+|.++.. +|++++|+..+++++.++|+++ .+...++.+....++..
T Consensus 101 ~~~g~~~~~-~g~~~~A~~~~~~al~l~p~~~~~~~~~l~~~~~~~~~~~ 149 (162)
T 3rkv_A 101 FRRAKARIA-AWKLDEAEEDLKLLLRNHPAAASVVAREMKIVTERRAEKK 149 (162)
T ss_dssp HHHHHHHHH-TTCHHHHHHHHHHHHHHCGGGHHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHH-HhcHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHH
Confidence 999999888 9999999999999999999998 77888888877665543
No 22
>3vtx_A MAMA; tetratricopeptide repeats (TPR) containing protein, peptide protein, protein binding; 1.75A {Candidatus magnetobacterium bavaricum} PDB: 3vty_A
Probab=99.87 E-value=3.7e-21 Score=105.61 Aligned_cols=94 Identities=16% Similarity=0.195 Sum_probs=88.6
Q ss_pred ccchhcHHHHHHHHHHHHhhCCChhHHHHHHHHHHHhhcChhhHHHHHHHHhccCCCCHHHHHHHHHHHHHhcCCHHHHH
Q psy12719 4 PGDRERVEQSLKEFRNFVDTHSNVVEACTLFAQVLVDQEDFDGAEEYFNRSIRVDPENASLYVHRAMLMLQARGNVDEAI 83 (116)
Q Consensus 4 ~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~a~ 83 (116)
+...++++.|...+.+++..+|.+..++..+|.++...|++++|+..|+++++.+|.++.+++.+|.++.. +|++++|+
T Consensus 83 ~~~~~~~~~a~~~~~~a~~~~~~~~~~~~~lg~~~~~~g~~~~A~~~~~~~l~~~p~~~~~~~~lg~~~~~-~g~~~~A~ 161 (184)
T 3vtx_A 83 NFMIDEKQAAIDALQRAIALNTVYADAYYKLGLVYDSMGEHDKAIEAYEKTISIKPGFIRAYQSIGLAYEG-KGLRDEAV 161 (184)
T ss_dssp HHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHH-TTCHHHHH
T ss_pred HHHcCCHHHHHHHHHHHHHhCccchHHHHHHHHHHHHhCCchhHHHHHHHHHHhcchhhhHHHHHHHHHHH-CCCHHHHH
Confidence 34568899999999999999999999999999999999999999999999999999999999999999888 99999999
Q ss_pred HHHHHHHhcCCCcHH
Q psy12719 84 KLIEKAISIDKSCMF 98 (116)
Q Consensus 84 ~~~~~~~~~~~~~~~ 98 (116)
+.++++++.+|+++.
T Consensus 162 ~~~~~al~~~p~~a~ 176 (184)
T 3vtx_A 162 KYFKKALEKEEKKAK 176 (184)
T ss_dssp HHHHHHHHTTHHHHH
T ss_pred HHHHHHHhCCccCHH
Confidence 999999999998753
No 23
>2lni_A Stress-induced-phosphoprotein 1; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative, chaperone; NMR {Homo sapiens}
Probab=99.87 E-value=3.5e-21 Score=100.38 Aligned_cols=108 Identities=15% Similarity=0.174 Sum_probs=102.9
Q ss_pred ccchhcHHHHHHHHHHHHhhCCChhHHHHHHHHHHHhhcChhhHHHHHHHHhccCCCCHHHHHHHHHHHHHhcCCHHHHH
Q psy12719 4 PGDRERVEQSLKEFRNFVDTHSNVVEACTLFAQVLVDQEDFDGAEEYFNRSIRVDPENASLYVHRAMLMLQARGNVDEAI 83 (116)
Q Consensus 4 ~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~a~ 83 (116)
+...|++++|+..+++++..+|.+..++..+|.++...|++++|+..+++++..+|.++.+++.+|.++.. .|++++|+
T Consensus 26 ~~~~~~~~~A~~~~~~al~~~~~~~~~~~~la~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~la~~~~~-~~~~~~A~ 104 (133)
T 2lni_A 26 CFQKGDYPQAMKHYTEAIKRNPKDAKLYSNRAACYTKLLEFQLALKDCEECIQLEPTFIKGYTRKAAALEA-MKDYTKAM 104 (133)
T ss_dssp HHHTTCSHHHHHHHHHHHTTCTTCHHHHHHHHHHHTTTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHH-TTCHHHHH
T ss_pred HHHcCCHHHHHHHHHHHHHcCCCcHHHHHHHHHHHHHhccHHHHHHHHHHHHHhCCCchHHHHHHHHHHHH-HhhHHHHH
Confidence 45678999999999999999999999999999999999999999999999999999999999999999888 89999999
Q ss_pred HHHHHHHhcCCCcHHHHHHHHHHHHhhcc
Q psy12719 84 KLIEKAISIDKSCMFAYETLGTIEVQRTF 112 (116)
Q Consensus 84 ~~~~~~~~~~~~~~~~~~~l~~~~~~~~~ 112 (116)
..+++++..+|.+..++..++.++..+|+
T Consensus 105 ~~~~~~~~~~p~~~~~~~~l~~~~~~~~~ 133 (133)
T 2lni_A 105 DVYQKALDLDSSCKEAADGYQRCMMAQYN 133 (133)
T ss_dssp HHHHHHHHHCGGGTHHHHHHHHHHHHHTC
T ss_pred HHHHHHHHhCCCchHHHHHHHHHHHHhcC
Confidence 99999999999999999999999988764
No 24
>1p5q_A FKBP52, FK506-binding protein 4; isomerase; 2.80A {Homo sapiens} SCOP: a.118.8.1 d.26.1.1 PDB: 1qz2_A
Probab=99.87 E-value=2.6e-21 Score=115.35 Aligned_cols=111 Identities=14% Similarity=0.114 Sum_probs=105.7
Q ss_pred ccchhcHHHHHHHHHHHHhhCCCh---------------hHHHHHHHHHHHhhcChhhHHHHHHHHhccCCCCHHHHHHH
Q psy12719 4 PGDRERVEQSLKEFRNFVDTHSNV---------------VEACTLFAQVLVDQEDFDGAEEYFNRSIRVDPENASLYVHR 68 (116)
Q Consensus 4 ~~~~~~~~~A~~~~~~~~~~~~~~---------------~~~~~~~~~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~~ 68 (116)
+...|++++|+..|++++...|.+ ..++.++|.++...|++++|+..|++++.++|+++.+++.+
T Consensus 157 ~~~~g~~~~A~~~y~~Al~~~p~~~~~~~~~~~~~~~~~~~~~~nla~~~~~~g~~~~A~~~~~~al~~~p~~~~a~~~l 236 (336)
T 1p5q_A 157 YFKEGKYKQALLQYKKIVSWLEYESSFSNEEAQKAQALRLASHLNLAMCHLKLQAFSAAIESCNKALELDSNNEKGLSRR 236 (336)
T ss_dssp HHHHTCHHHHHHHHHHHHHHTTTCCCCCSHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHH
T ss_pred HHHCCCHHHHHHHHHHHHHHhhccccCChHHHHHHHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCcHHHHHHH
Confidence 456899999999999999999998 58999999999999999999999999999999999999999
Q ss_pred HHHHHHhcCCHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHhhccccc
Q psy12719 69 AMLMLQARGNVDEAIKLIEKAISIDKSCMFAYETLGTIEVQRTFVVL 115 (116)
Q Consensus 69 ~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~ 115 (116)
|.++.. +|++++|+..++++++++|+++.++..++.++...|++++
T Consensus 237 g~~~~~-~g~~~~A~~~~~~al~l~P~~~~a~~~l~~~~~~~~~~~~ 282 (336)
T 1p5q_A 237 GEAHLA-VNDFELARADFQKVLQLYPNNKAAKTQLAVCQQRIRRQLA 282 (336)
T ss_dssp HHHHHH-TTCHHHHHHHHHHHHHHCSSCHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHH-CCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHH
Confidence 999888 9999999999999999999999999999999999988765
No 25
>2h6f_A Protein farnesyltransferase/geranylgeranyltransferase type I alpha subunit; ftase, farnesyltransferase, farnesyl transferase, prenyltransferase, CAAX, RAS, lipid modification, prenylation; HET: SUC FAR; 1.50A {Homo sapiens} SCOP: a.118.6.1 PDB: 1jcq_A* 1ld7_A* 1mzc_A* 1s63_A* 1sa4_A* 1tn6_A* 1ld8_A* 2h6g_A* 2h6h_A* 2h6i_A* 2iej_A* 3e37_A* 2f0y_A* 3ksl_A* 2zir_A* 2zis_A* 1o5m_A* 3ksq_A* 1o1t_A* 1o1s_A* ...
Probab=99.87 E-value=8.7e-22 Score=119.12 Aligned_cols=110 Identities=7% Similarity=0.082 Sum_probs=102.6
Q ss_pred ccchhc-HHHHHHHHHHHHhhCCChhHHHHHHHHHHHhhcChhhHHHHHHHHhccCCCCHHHHHHHHHHHHHhcCCHHHH
Q psy12719 4 PGDRER-VEQSLKEFRNFVDTHSNVVEACTLFAQVLVDQEDFDGAEEYFNRSIRVDPENASLYVHRAMLMLQARGNVDEA 82 (116)
Q Consensus 4 ~~~~~~-~~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~a 82 (116)
+...|+ +++|+..|++++..+|++..+|..+|.++...|++++|+..|++++.++|++..+|+++|.++.. .|++++|
T Consensus 141 l~~~g~d~~eAl~~~~~al~l~P~~~~a~~~~g~~~~~~g~~~eAl~~~~kal~ldP~~~~a~~~lg~~~~~-~g~~~eA 219 (382)
T 2h6f_A 141 LKSLQKDLHEEMNYITAIIEEQPKNYQVWHHRRVLVEWLRDPSQELEFIADILNQDAKNYHAWQHRQWVIQE-FKLWDNE 219 (382)
T ss_dssp HHHTTCCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHTCCTTHHHHHHHHHHHCTTCHHHHHHHHHHHHH-HTCCTTH
T ss_pred HHHcccCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCccCHHHHHHHHHHHHH-cCChHHH
Confidence 445675 99999999999999999999999999999999999999999999999999999999999999877 8999999
Q ss_pred HHHHHHHHhcCCCcHHHHHHHHHHHHh-hcccc
Q psy12719 83 IKLIEKAISIDKSCMFAYETLGTIEVQ-RTFVV 114 (116)
Q Consensus 83 ~~~~~~~~~~~~~~~~~~~~l~~~~~~-~~~~~ 114 (116)
+..++++++.+|++..+|..+|.++.. .|..+
T Consensus 220 l~~~~~al~l~P~~~~a~~~lg~~l~~l~~~~~ 252 (382)
T 2h6f_A 220 LQYVDQLLKEDVRNNSVWNQRYFVISNTTGYND 252 (382)
T ss_dssp HHHHHHHHHHCTTCHHHHHHHHHHHHHTTCSCS
T ss_pred HHHHHHHHHhCCCCHHHHHHHHHHHHHhcCcch
Confidence 999999999999999999999999998 44424
No 26
>3k9i_A BH0479 protein; putative protein binding protein, structural genomics, joint for structural genomics, JCSG; 2.71A {Bacillus halodurans}
Probab=99.86 E-value=1.5e-21 Score=100.53 Aligned_cols=108 Identities=13% Similarity=0.138 Sum_probs=93.8
Q ss_pred chhcHHHHHHHHHHHHhh---CCChhHHHHHHHHHHHhhcChhhHHHHHHHHhccCCCCHHHHHHHHHHHHHhcCCHHHH
Q psy12719 6 DRERVEQSLKEFRNFVDT---HSNVVEACTLFAQVLVDQEDFDGAEEYFNRSIRVDPENASLYVHRAMLMLQARGNVDEA 82 (116)
Q Consensus 6 ~~~~~~~A~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~a 82 (116)
.+|++++|+..|+++++. +|+++.++..+|.++...|++++|+..|+++++.+|+++.+++.+|.++.. .|++++|
T Consensus 2 ~~g~~~~A~~~~~~al~~~~~~p~~~~~~~~lg~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~l~~~~~~-~g~~~~A 80 (117)
T 3k9i_A 2 VLGLEAQAVPYYEKAIASGLQGKDLAECYLGLGSTFRTLGEYRKAEAVLANGVKQFPNHQALRVFYAMVLYN-LGRYEQG 80 (117)
T ss_dssp -----CCCHHHHHHHHSSCCCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHH-HTCHHHH
T ss_pred CCCcHHHHHHHHHHHHHcCCCCccHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCchHHHHHHHHHHHH-cCCHHHH
Confidence 468999999999999999 588899999999999999999999999999999999999999999999888 8999999
Q ss_pred HHHHHHHHhcCCCcHHHHHHHHHHHHhhcccc
Q psy12719 83 IKLIEKAISIDKSCMFAYETLGTIEVQRTFVV 114 (116)
Q Consensus 83 ~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~ 114 (116)
+..+++++...|+++.+......+....+..+
T Consensus 81 ~~~~~~al~~~p~~~~~~~~~~ai~~~~~~l~ 112 (117)
T 3k9i_A 81 VELLLKIIAETSDDETIQSYKQAILFYADKLD 112 (117)
T ss_dssp HHHHHHHHHHHCCCHHHHHTHHHHHHHTTCTT
T ss_pred HHHHHHHHHhCCCcHHHHHHHHHHHHHHHHHH
Confidence 99999999999999887766666655555444
No 27
>2xcb_A PCRH, regulatory protein PCRH; protein transport, bacterial toxin, type III secretion, protein binding; 1.85A {Pseudomonas aeruginosa} PDB: 2xcc_A
Probab=99.86 E-value=2e-21 Score=103.13 Aligned_cols=101 Identities=10% Similarity=-0.017 Sum_probs=93.7
Q ss_pred HHHHHHHhhCCChhHHHHHHHHHHHhhcChhhHHHHHHHHhccCCCCHHHHHHHHHHHHHhcCCHHHHHHHHHHHHhcCC
Q psy12719 15 KEFRNFVDTHSNVVEACTLFAQVLVDQEDFDGAEEYFNRSIRVDPENASLYVHRAMLMLQARGNVDEAIKLIEKAISIDK 94 (116)
Q Consensus 15 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~ 94 (116)
..|.+++..+|++...++.+|..+...|++++|+..|++++..+|.++.+|+.+|.++.. .|++++|+..+++++..+|
T Consensus 5 ~~l~~al~~~p~~~~~~~~~a~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~lg~~~~~-~g~~~~A~~~~~~al~~~p 83 (142)
T 2xcb_A 5 GTLAMLRGLSEDTLEQLYALGFNQYQAGKWDDAQKIFQALCMLDHYDARYFLGLGACRQS-LGLYEQALQSYSYGALMDI 83 (142)
T ss_dssp ----CCTTCCHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHH-TTCHHHHHHHHHHHHHHCT
T ss_pred hhHHHHHcCCHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHhCCccHHHHHHHHHHHHH-HhhHHHHHHHHHHHHhcCC
Confidence 568888999999999999999999999999999999999999999999999999999887 9999999999999999999
Q ss_pred CcHHHHHHHHHHHHhhcccccC
Q psy12719 95 SCMFAYETLGTIEVQRTFVVLW 116 (116)
Q Consensus 95 ~~~~~~~~l~~~~~~~~~~~~a 116 (116)
+++.++..+|.++...|++++|
T Consensus 84 ~~~~~~~~lg~~~~~~g~~~~A 105 (142)
T 2xcb_A 84 NEPRFPFHAAECHLQLGDLDGA 105 (142)
T ss_dssp TCTHHHHHHHHHHHHTTCHHHH
T ss_pred CCcHHHHHHHHHHHHcCCHHHH
Confidence 9999999999999999998764
No 28
>4i17_A Hypothetical protein; TPR repeats protein, structural genomics, joint center for S genomics, JCSG, protein structure initiative; HET: MSE; 1.83A {Bacteroides fragilis}
Probab=99.86 E-value=1.1e-20 Score=106.90 Aligned_cols=110 Identities=15% Similarity=0.158 Sum_probs=103.9
Q ss_pred cccchhcHHHHHHHHHHHHhhCCChhHHHHHHHHHHHhhcChhhHHHHHHHHhccCCCCH-------HHHHHHHHHHHHh
Q psy12719 3 VPGDRERVEQSLKEFRNFVDTHSNVVEACTLFAQVLVDQEDFDGAEEYFNRSIRVDPENA-------SLYVHRAMLMLQA 75 (116)
Q Consensus 3 ~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~a~~~~~~~~-------~~~~~~~~~~~~~ 75 (116)
++...|++++|+..+++++..+|++..++..+|.++...|++++|+..+++++..+|+++ .++..+|.++..
T Consensus 51 ~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~l~~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~~~g~~~~~- 129 (228)
T 4i17_A 51 CADNIKKYKEAADYFDIAIKKNYNLANAYIGKSAAYRDMKNNQEYIATLTEGIKAVPGNATIEKLYAIYYLKEGQKFQQ- 129 (228)
T ss_dssp HHHHTTCHHHHHHHHHHHHHTTCSHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSTTCHHHHHHHHHHHHHHHHHHHH-
T ss_pred HHHHhhcHHHHHHHHHHHHHhCcchHHHHHHHHHHHHHcccHHHHHHHHHHHHHHCCCcHHHHHHHHHHHHHHhHHHHH-
Confidence 355789999999999999999999999999999999999999999999999999999998 669999999887
Q ss_pred cCCHHHHHHHHHHHHhcCCC--cHHHHHHHHHHHHhhccc
Q psy12719 76 RGNVDEAIKLIEKAISIDKS--CMFAYETLGTIEVQRTFV 113 (116)
Q Consensus 76 ~~~~~~a~~~~~~~~~~~~~--~~~~~~~l~~~~~~~~~~ 113 (116)
.|++++|++.++++++.+|+ ++.++..+|.++...|+.
T Consensus 130 ~~~~~~A~~~~~~al~~~p~~~~~~~~~~l~~~~~~~~~~ 169 (228)
T 4i17_A 130 AGNIEKAEENYKHATDVTSKKWKTDALYSLGVLFYNNGAD 169 (228)
T ss_dssp TTCHHHHHHHHHHHTTSSCHHHHHHHHHHHHHHHHHHHHH
T ss_pred hccHHHHHHHHHHHHhcCCCcccHHHHHHHHHHHHHHHHH
Confidence 89999999999999999999 999999999999988875
No 29
>1a17_A Serine/threonine protein phosphatase 5; hydrolase, protein-protein interactions, TPR, S helix; 2.45A {Homo sapiens} SCOP: a.118.8.1 PDB: 2bug_A
Probab=99.86 E-value=1.4e-20 Score=101.47 Aligned_cols=112 Identities=13% Similarity=0.041 Sum_probs=102.2
Q ss_pred ccchhcHHHHHHHHHHHHhhCCChhHHHHHHHHHHHhhcChhhHHHHHHHHhccCCCCHHHHHHHHHHHHHhcCCHHHHH
Q psy12719 4 PGDRERVEQSLKEFRNFVDTHSNVVEACTLFAQVLVDQEDFDGAEEYFNRSIRVDPENASLYVHRAMLMLQARGNVDEAI 83 (116)
Q Consensus 4 ~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~a~ 83 (116)
+...|++++|+..|.+++..+|.+..++..+|.++...|++++|+..+++++..+|.++.+++.+|.++.. .|++++|+
T Consensus 23 ~~~~~~~~~A~~~~~~al~~~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~~a~~~~~-~~~~~~A~ 101 (166)
T 1a17_A 23 YFKAKDYENAIKFYSQAIELNPSNAIYYGNRSLAYLRTECYGYALGDATRAIELDKKYIKGYYRRAASNMA-LGKFRAAL 101 (166)
T ss_dssp HHHTTCHHHHHHHHHHHHHHSTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHH-TTCHHHHH
T ss_pred HHHccCHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCcccHHHHHHHHHHHHH-hccHHHHH
Confidence 45679999999999999999999999999999999999999999999999999999999999999999887 89999999
Q ss_pred HHHHHHHhcCCCcHHHHHHHHHH--HHhhcccccC
Q psy12719 84 KLIEKAISIDKSCMFAYETLGTI--EVQRTFVVLW 116 (116)
Q Consensus 84 ~~~~~~~~~~~~~~~~~~~l~~~--~~~~~~~~~a 116 (116)
..+.+++..+|+++.++..++.+ +...|++++|
T Consensus 102 ~~~~~a~~~~p~~~~~~~~~~~~~~~~~~~~~~~A 136 (166)
T 1a17_A 102 RDYETVVKVKPHDKDAKMKYQECNKIVKQKAFERA 136 (166)
T ss_dssp HHHHHHHHHSTTCHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHhCCCCHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999998888555555 7777777653
No 30
>1wao_1 Serine/threonine protein phosphatase 5; hydrolase, protein-protein interactions, TPR, super-helix,; 2.9A {Homo sapiens} SCOP: a.118.8.1 d.159.1.3
Probab=99.86 E-value=1.8e-20 Score=116.16 Aligned_cols=113 Identities=13% Similarity=0.032 Sum_probs=107.6
Q ss_pred cccchhcHHHHHHHHHHHHhhCCChhHHHHHHHHHHHhhcChhhHHHHHHHHhccCCCCHHHHHHHHHHHHHhcCCHHHH
Q psy12719 3 VPGDRERVEQSLKEFRNFVDTHSNVVEACTLFAQVLVDQEDFDGAEEYFNRSIRVDPENASLYVHRAMLMLQARGNVDEA 82 (116)
Q Consensus 3 ~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~a 82 (116)
.+...|++++|++.|+++++.+|++..++..+|.++...|++++|+..++++++.+|.++.+++++|.++.. +|++++|
T Consensus 15 ~~~~~g~~~~A~~~~~~Al~~~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~l~p~~~~~~~~lg~~~~~-~g~~~eA 93 (477)
T 1wao_1 15 DYFKAKDYENAIKFYSQAIELNPSNAIYYGNRSLAYLRTECYGYALGDATRAIELDKKYIKGYYRRAASNMA-LGKFRAA 93 (477)
T ss_dssp STTTTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHSCTTCHHHHHHHHHHHHH-HTCHHHH
T ss_pred HHHHhCCHHHHHHHHHHHHHhCCccHHHHHHHHHHHHHhcCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHH-cCCHHHH
Confidence 467889999999999999999999999999999999999999999999999999999999999999999888 8999999
Q ss_pred HHHHHHHHhcCCCcHHHHHHHHHH--HHhhcccccC
Q psy12719 83 IKLIEKAISIDKSCMFAYETLGTI--EVQRTFVVLW 116 (116)
Q Consensus 83 ~~~~~~~~~~~~~~~~~~~~l~~~--~~~~~~~~~a 116 (116)
++.++++++.+|++..++..++.+ +..+|++++|
T Consensus 94 ~~~~~~al~~~p~~~~~~~~l~~~~~~~~~g~~~~A 129 (477)
T 1wao_1 94 LRDYETVVKVKPHDKDAKMKYQECNKIVKQKAFERA 129 (477)
T ss_dssp HHHHHHHHHHSTTCTTHHHHHHHHHHHHHHHHHCCC
T ss_pred HHHHHHHHHhCCCCHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999998 8888888876
No 31
>2fbn_A 70 kDa peptidylprolyl isomerase, putative; sulfur SAD, PFL2275C, TPR-containing domain, structural genomics; 1.63A {Plasmodium falciparum} SCOP: a.118.8.1
Probab=99.86 E-value=1.7e-20 Score=104.27 Aligned_cols=111 Identities=11% Similarity=0.103 Sum_probs=104.3
Q ss_pred ccchhcHHHHHHHHHHHHhhCCChh----------------HHHHHHHHHHHhhcChhhHHHHHHHHhccCCCCHHHHHH
Q psy12719 4 PGDRERVEQSLKEFRNFVDTHSNVV----------------EACTLFAQVLVDQEDFDGAEEYFNRSIRVDPENASLYVH 67 (116)
Q Consensus 4 ~~~~~~~~~A~~~~~~~~~~~~~~~----------------~~~~~~~~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~ 67 (116)
+...|++++|+..|.+++...|.++ .++..+|.++...|++++|+.++++++..+|.++.+++.
T Consensus 48 ~~~~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~ 127 (198)
T 2fbn_A 48 FFKKNEINEAIVKYKEALDFFIHTEEWDDQILLDKKKNIEISCNLNLATCYNKNKDYPKAIDHASKVLKIDKNNVKALYK 127 (198)
T ss_dssp HHHTTCHHHHHHHHHHHHHTTTTCTTCCCHHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSTTCHHHHHH
T ss_pred HHHcCCHHHHHHHHHHHHHHHhcccccchhhHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHhCcccHHHHHH
Confidence 4567999999999999999998887 899999999999999999999999999999999999999
Q ss_pred HHHHHHHhcCCHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHhhccccc
Q psy12719 68 RAMLMLQARGNVDEAIKLIEKAISIDKSCMFAYETLGTIEVQRTFVVL 115 (116)
Q Consensus 68 ~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~ 115 (116)
+|.++.. .|++++|+..+++++..+|+++.++..++.++...++..+
T Consensus 128 lg~~~~~-~~~~~~A~~~~~~al~~~p~~~~~~~~l~~~~~~~~~~~~ 174 (198)
T 2fbn_A 128 LGVANMY-FGFLEEAKENLYKAASLNPNNLDIRNSYELCVNKLKEARK 174 (198)
T ss_dssp HHHHHHH-HTCHHHHHHHHHHHHHHSTTCHHHHHHHHHHHHHHHHHHC
T ss_pred HHHHHHH-cccHHHHHHHHHHHHHHCCCcHHHHHHHHHHHHHHHHHHH
Confidence 9999888 8999999999999999999999999999999988877654
No 32
>2e2e_A Formate-dependent nitrite reductase complex NRFG; TPR, cytochrome C biogenesis, O157:H7 EDL933, formate- nitrite reductase complex, lyase; 2.05A {Escherichia coli}
Probab=99.86 E-value=2.4e-21 Score=105.92 Aligned_cols=112 Identities=17% Similarity=0.240 Sum_probs=99.1
Q ss_pred ccchhcHHHHHHHHHHHHhhCCChhHHHHHHHHHHHhhcChhhHHHHHHHHhccCCCCHHHHHHHHHH-HHHhcCCH--H
Q psy12719 4 PGDRERVEQSLKEFRNFVDTHSNVVEACTLFAQVLVDQEDFDGAEEYFNRSIRVDPENASLYVHRAML-MLQARGNV--D 80 (116)
Q Consensus 4 ~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~~~~~-~~~~~~~~--~ 80 (116)
+...|++++|+..+++++..+|.++.++..+|.++...|++++|+.+|++++..+|.++.++..+|.+ +.. .|++ +
T Consensus 20 ~~~~~~~~~A~~~~~~al~~~p~~~~~~~~lg~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~la~~l~~~-~~~~~~~ 98 (177)
T 2e2e_A 20 FASQQNPEAQLQALQDKIRANPQNSEQWALLGEYYLWQNDYSNSLLAYRQALQLRGENAELYAALATVLYYQ-ASQHMTA 98 (177)
T ss_dssp CC-----CCCCHHHHHHHHHCCSCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHCSCHHHHHHHHHHHHHH-TTTCCCH
T ss_pred hhhccCHHHHHHHHHHHHHhCCCcHHHHHHHHHHHHHcCCHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHh-cCCcchH
Confidence 45678899999999999999999999999999999999999999999999999999999999999999 556 8998 9
Q ss_pred HHHHHHHHHHhcCCCcHHHHHHHHHHHHhhcccccC
Q psy12719 81 EAIKLIEKAISIDKSCMFAYETLGTIEVQRTFVVLW 116 (116)
Q Consensus 81 ~a~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~a 116 (116)
+|+..+++++..+|+++.++..+|.++...|++++|
T Consensus 99 ~A~~~~~~al~~~p~~~~~~~~la~~~~~~g~~~~A 134 (177)
T 2e2e_A 99 QTRAMIDKALALDSNEITALMLLASDAFMQANYAQA 134 (177)
T ss_dssp HHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHH
T ss_pred HHHHHHHHHHHhCCCcHHHHHHHHHHHHHcccHHHH
Confidence 999999999999999999999999999999988764
No 33
>1hxi_A PEX5, peroxisome targeting signal 1 receptor PEX5; alpha helical, transport protein; 1.60A {Trypanosoma brucei} SCOP: a.118.8.1
Probab=99.86 E-value=3.8e-21 Score=99.63 Aligned_cols=94 Identities=12% Similarity=0.052 Sum_probs=81.2
Q ss_pred ccchhcHHHHHHHHHHHHhhCCChhHHHHHHHHHHHhhcChhhHHHHHHHHhccCCCCHHHHHHHHHHHHHhcCCHHHHH
Q psy12719 4 PGDRERVEQSLKEFRNFVDTHSNVVEACTLFAQVLVDQEDFDGAEEYFNRSIRVDPENASLYVHRAMLMLQARGNVDEAI 83 (116)
Q Consensus 4 ~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~a~ 83 (116)
+...|++++|+..|+++++.+|+++.+|..+|.++...|++++|+..|++++.++|+++.+++.+|.++.. .|++++|+
T Consensus 27 ~~~~g~~~~A~~~~~~al~~~P~~~~a~~~lg~~~~~~g~~~~A~~~~~~al~l~P~~~~~~~~la~~~~~-~g~~~~A~ 105 (121)
T 1hxi_A 27 MLKLANLAEAALAFEAVCQKEPEREEAWRSLGLTQAENEKDGLAIIALNHARMLDPKDIAVHAALAVSHTN-EHNANAAL 105 (121)
T ss_dssp HHHTTCHHHHHHHHHHHHHHSTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHH-HHHHHHHH
T ss_pred HHHcCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHH-cCCHHHHH
Confidence 45678999999999999999999999999999999999999999999999999999999999999999877 89999999
Q ss_pred HHHHHHHhcCCCcHH
Q psy12719 84 KLIEKAISIDKSCMF 98 (116)
Q Consensus 84 ~~~~~~~~~~~~~~~ 98 (116)
..++++++.+|++..
T Consensus 106 ~~~~~al~~~P~~~~ 120 (121)
T 1hxi_A 106 ASLRAWLLSQPQYEQ 120 (121)
T ss_dssp HHHHHHHC-------
T ss_pred HHHHHHHHhCcCCCC
Confidence 999999999987653
No 34
>4eqf_A PEX5-related protein; accessory protein, tetratricopeptide repeat, TPR; 3.00A {Mus musculus}
Probab=99.86 E-value=2.3e-20 Score=111.64 Aligned_cols=113 Identities=17% Similarity=0.180 Sum_probs=106.4
Q ss_pred cccchhcHHHHHHHHHHHHhhCCC--hhHHHHHHHHHHHhhcChhhHHHHHHHHhccCCCCHHHHHHHHHHHHHhcCCHH
Q psy12719 3 VPGDRERVEQSLKEFRNFVDTHSN--VVEACTLFAQVLVDQEDFDGAEEYFNRSIRVDPENASLYVHRAMLMLQARGNVD 80 (116)
Q Consensus 3 ~~~~~~~~~~A~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (116)
.+...|++++|+..+++++..+|. ++.++..+|.++...|++++|+..|++++..+|.++.++..+|.++.. .|+++
T Consensus 186 ~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~l~~~~~~-~g~~~ 264 (365)
T 4eqf_A 186 SPVDSSVLEGVKELYLEAAHQNGDMIDPDLQTGLGVLFHLSGEFNRAIDAFNAALTVRPEDYSLWNRLGATLAN-GDRSE 264 (365)
T ss_dssp ---CCHHHHHHHHHHHHHHHHSCSSCCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHH-TTCHH
T ss_pred HHhhhhhHHHHHHHHHHHHHhCcCccCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHH-cCCHH
Confidence 456789999999999999999999 899999999999999999999999999999999999999999999888 89999
Q ss_pred HHHHHHHHHHhcCCCcHHHHHHHHHHHHhhcccccC
Q psy12719 81 EAIKLIEKAISIDKSCMFAYETLGTIEVQRTFVVLW 116 (116)
Q Consensus 81 ~a~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~a 116 (116)
+|+..++++++.+|+++.++..+|.++...|++++|
T Consensus 265 ~A~~~~~~al~~~p~~~~~~~~l~~~~~~~g~~~~A 300 (365)
T 4eqf_A 265 EAVEAYTRALEIQPGFIRSRYNLGISCINLGAYREA 300 (365)
T ss_dssp HHHHHHHHHHHHCTTCHHHHHHHHHHHHHHTCCHHH
T ss_pred HHHHHHHHHHhcCCCchHHHHHHHHHHHHCCCHHHH
Confidence 999999999999999999999999999999998764
No 35
>1zu2_A Mitochondrial import receptor subunit TOM20-3; TPR, tetratricopeptide repeat like, TPR-like, transport protein; NMR {Arabidopsis thaliana} SCOP: a.118.8.1
Probab=99.86 E-value=1.2e-20 Score=100.94 Aligned_cols=100 Identities=16% Similarity=0.152 Sum_probs=91.3
Q ss_pred chhcHHHHHHHHHHHHhhCCChhHHHHHHHHHHHhhcCh----------hhHHHHHHHHhccCCCCHHHHHHHHHHHHHh
Q psy12719 6 DRERVEQSLKEFRNFVDTHSNVVEACTLFAQVLVDQEDF----------DGAEEYFNRSIRVDPENASLYVHRAMLMLQA 75 (116)
Q Consensus 6 ~~~~~~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------~~A~~~~~~a~~~~~~~~~~~~~~~~~~~~~ 75 (116)
+.+.|++|++.++++++.+|+++++|.++|.++...+++ ++|+..|+++++++|+...+|+++|.+|..
T Consensus 14 r~~~feeA~~~~~~Ai~l~P~~aea~~n~G~~l~~l~~~~~g~~al~~~~eAi~~le~AL~ldP~~~~A~~~LG~ay~~- 92 (158)
T 1zu2_A 14 RILLFEQIRQDAENTYKSNPLDADNLTRWGGVLLELSQFHSISDAKQMIQEAITKFEEALLIDPKKDEAVWCIGNAYTS- 92 (158)
T ss_dssp HHHHHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHH-
T ss_pred HHhHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHhcccchhhhhHhHHHHHHHHHHHHHHhCcCcHHHHHHHHHHHHH-
Confidence 457899999999999999999999999999999998876 499999999999999999999999999876
Q ss_pred c-----------CCHHHHHHHHHHHHhcCCCcHHHHHHHHHH
Q psy12719 76 R-----------GNVDEAIKLIEKAISIDKSCMFAYETLGTI 106 (116)
Q Consensus 76 ~-----------~~~~~a~~~~~~~~~~~~~~~~~~~~l~~~ 106 (116)
+ |++++|+++|+++++++|++...+..+..+
T Consensus 93 lg~l~P~~~~a~g~~~eA~~~~~kAl~l~P~~~~y~~al~~~ 134 (158)
T 1zu2_A 93 FAFLTPDETEAKHNFDLATQFFQQAVDEQPDNTHYLKSLEMT 134 (158)
T ss_dssp HHHHCCCHHHHHHHHHHHHHHHHHHHHHCTTCHHHHHHHHHH
T ss_pred hcccCcchhhhhccHHHHHHHHHHHHHhCCCCHHHHHHHHHH
Confidence 5 489999999999999999998777766554
No 36
>1elw_A TPR1-domain of HOP; HOP, TPR-domain, peptide-complex, helical repeat, HSP70, protein binding, chaperone; 1.60A {Homo sapiens} SCOP: a.118.8.1
Probab=99.85 E-value=8.6e-20 Score=93.14 Aligned_cols=104 Identities=13% Similarity=0.138 Sum_probs=98.4
Q ss_pred ccchhcHHHHHHHHHHHHhhCCChhHHHHHHHHHHHhhcChhhHHHHHHHHhccCCCCHHHHHHHHHHHHHhcCCHHHHH
Q psy12719 4 PGDRERVEQSLKEFRNFVDTHSNVVEACTLFAQVLVDQEDFDGAEEYFNRSIRVDPENASLYVHRAMLMLQARGNVDEAI 83 (116)
Q Consensus 4 ~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~a~ 83 (116)
+...|++++|+..+++++..+|.++.++..+|.++...|++++|+..+++++..+|.++.+++.+|.++.. .|++++|.
T Consensus 14 ~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~a~~~~~-~~~~~~A~ 92 (118)
T 1elw_A 14 ALSVGNIDDALQCYSEAIKLDPHNHVLYSNRSAAYAKKGDYQKAYEDGCKTVDLKPDWGKGYSRKAAALEF-LNRFEEAK 92 (118)
T ss_dssp HHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHH-TTCHHHHH
T ss_pred HHHcccHHHHHHHHHHHHHHCCCcHHHHHHHHHHHHhhccHHHHHHHHHHHHHhCcccHHHHHHHHHHHHH-HhhHHHHH
Confidence 45679999999999999999999999999999999999999999999999999999999999999999887 89999999
Q ss_pred HHHHHHHhcCCCcHHHHHHHHHHHH
Q psy12719 84 KLIEKAISIDKSCMFAYETLGTIEV 108 (116)
Q Consensus 84 ~~~~~~~~~~~~~~~~~~~l~~~~~ 108 (116)
..+++++..+|+++.++..++.+..
T Consensus 93 ~~~~~~~~~~~~~~~~~~~l~~~~~ 117 (118)
T 1elw_A 93 RTYEEGLKHEANNPQLKEGLQNMEA 117 (118)
T ss_dssp HHHHHHHTTCTTCHHHHHHHHHHHH
T ss_pred HHHHHHHHcCCCCHHHHHHHHHhhc
Confidence 9999999999999999999888753
No 37
>1na0_A Designed protein CTPR3; de novo protein; HET: IPT; 1.60A {Unidentified} SCOP: k.38.1.1 PDB: 2wqh_A 3kd7_A
Probab=99.85 E-value=1.2e-19 Score=93.35 Aligned_cols=107 Identities=22% Similarity=0.387 Sum_probs=101.3
Q ss_pred ccchhcHHHHHHHHHHHHhhCCChhHHHHHHHHHHHhhcChhhHHHHHHHHhccCCCCHHHHHHHHHHHHHhcCCHHHHH
Q psy12719 4 PGDRERVEQSLKEFRNFVDTHSNVVEACTLFAQVLVDQEDFDGAEEYFNRSIRVDPENASLYVHRAMLMLQARGNVDEAI 83 (116)
Q Consensus 4 ~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~a~ 83 (116)
+...|++++|++.+++++...|.+..++..+|.++...|++++|+..+++++...|.++.++..+|.++.. .|++++|.
T Consensus 19 ~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~la~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~la~~~~~-~~~~~~A~ 97 (125)
T 1na0_A 19 YYKQGDYDEAIEYYQKALELDPNNAEAWYNLGNAYYKQGDYDEAIEYYQKALELDPNNAEAWYNLGNAYYK-QGDYDEAI 97 (125)
T ss_dssp HHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHH-TTCHHHHH
T ss_pred HHHcCCHHHHHHHHHHHHHHCcCcHHHHHHHHHHHHHhCCHHHHHHHHHHHHHhCCccHHHHHHHHHHHHH-hcCHHHHH
Confidence 45678999999999999999999999999999999999999999999999999999999999999999887 89999999
Q ss_pred HHHHHHHhcCCCcHHHHHHHHHHHHhhc
Q psy12719 84 KLIEKAISIDKSCMFAYETLGTIEVQRT 111 (116)
Q Consensus 84 ~~~~~~~~~~~~~~~~~~~l~~~~~~~~ 111 (116)
..+++++..+|+++.++..++.++...|
T Consensus 98 ~~~~~~~~~~~~~~~~~~~l~~~~~~~g 125 (125)
T 1na0_A 98 EYYQKALELDPNNAEAKQNLGNAKQKQG 125 (125)
T ss_dssp HHHHHHHHHCTTCHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHhCCCcHHHHHHHHHHHHhcc
Confidence 9999999999999999999999987764
No 38
>3q49_B STIP1 homology and U box-containing protein 1; E3 ubiquitin ligase, ligase-chaperone complex; 1.54A {Mus musculus} PDB: 3q47_B 3q4a_B*
Probab=99.85 E-value=2.8e-20 Score=97.69 Aligned_cols=108 Identities=15% Similarity=0.044 Sum_probs=99.1
Q ss_pred ccchhcHHHHHHHHHHHHhhCCChhHHHHHHHHHHHhhcChhhHHHHHHHHhccCCCCHHHHHHHHHHHHHhcCCHHHHH
Q psy12719 4 PGDRERVEQSLKEFRNFVDTHSNVVEACTLFAQVLVDQEDFDGAEEYFNRSIRVDPENASLYVHRAMLMLQARGNVDEAI 83 (116)
Q Consensus 4 ~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~a~ 83 (116)
+...|++++|+..|.+++..+|.++.++..+|.++...|++++|+..+++++..+|.++.+++.+|.++.. .|++++|+
T Consensus 19 ~~~~~~~~~A~~~~~~al~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~l~~~~~~-~~~~~~A~ 97 (137)
T 3q49_B 19 LFVGRKYPEAAACYGRAITRNPLVAVYYTNRALCYLKMQQPEQALADCRRALELDGQSVKAHFFLGQCQLE-MESYDEAI 97 (137)
T ss_dssp HHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHH-TTCHHHHH
T ss_pred HHHhCcHHHHHHHHHHHHhhCcCcHHHHHHHHHHHHHhcCHHHHHHHHHHHHHhCchhHHHHHHHHHHHHH-HhhHHHHH
Confidence 45689999999999999999999999999999999999999999999999999999999999999999888 89999999
Q ss_pred HHHHHHHhcCCC-----cHHHHHHHHHHHHhhcc
Q psy12719 84 KLIEKAISIDKS-----CMFAYETLGTIEVQRTF 112 (116)
Q Consensus 84 ~~~~~~~~~~~~-----~~~~~~~l~~~~~~~~~ 112 (116)
..+.+++..+|+ +..++..+..+......
T Consensus 98 ~~~~~a~~~~p~~~~~~~~~~~~~l~~~~~~~~~ 131 (137)
T 3q49_B 98 ANLQRAYSLAKEQRLNFGDDIPSALRIAKKKRWN 131 (137)
T ss_dssp HHHHHHHHHHHHTTCCCTTHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHChhHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999888 67777777777665543
No 39
>4gcn_A Protein STI-1; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, tetratricopeptide repeat domain; HET: PGE; 1.85A {Caenorhabditis elegans}
Probab=99.85 E-value=3.2e-20 Score=96.88 Aligned_cols=100 Identities=9% Similarity=0.166 Sum_probs=87.8
Q ss_pred ccchhcHHHHHHHHHHHHhhCCChhHHHHHHHHHHHhhcChhhHHHHHHHHhccCCCC-------HHHHHHHHHHHHHhc
Q psy12719 4 PGDRERVEQSLKEFRNFVDTHSNVVEACTLFAQVLVDQEDFDGAEEYFNRSIRVDPEN-------ASLYVHRAMLMLQAR 76 (116)
Q Consensus 4 ~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~a~~~~~~~-------~~~~~~~~~~~~~~~ 76 (116)
+.+.|+|++|++.|+++++.+|+++.++.++|.++...|++++|+..+++++.++|.+ ..++.++|.++.. .
T Consensus 18 ~~~~~~~~~A~~~y~~Al~~~p~~~~~~~nlg~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~~a~~~~~lg~~~~~-~ 96 (127)
T 4gcn_A 18 AYKQKDFEKAHVHYDKAIELDPSNITFYNNKAAVYFEEKKFAECVQFCEKAVEVGRETRADYKLIAKAMSRAGNAFQK-Q 96 (127)
T ss_dssp HHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHH-T
T ss_pred HHHcCCHHHHHHHHHHHHHhCCCCHHHHHhHHHHHHHhhhHHHHHHHHHHHHHhCcccchhhHHHHHHHHHHHHHHHH-c
Confidence 4578999999999999999999999999999999999999999999999999998765 3578899999777 8
Q ss_pred CCHHHHHHHHHHHHhcCCCcHHHHHHHHH
Q psy12719 77 GNVDEAIKLIEKAISIDKSCMFAYETLGT 105 (116)
Q Consensus 77 ~~~~~a~~~~~~~~~~~~~~~~~~~~l~~ 105 (116)
|++++|++.+++++...|+ +.....+..
T Consensus 97 ~~~~~A~~~~~kal~~~~~-~~~~~~l~~ 124 (127)
T 4gcn_A 97 NDLSLAVQWFHRSLSEFRD-PELVKKVKE 124 (127)
T ss_dssp TCHHHHHHHHHHHHHHSCC-HHHHHHHHH
T ss_pred CCHHHHHHHHHHHHhhCcC-HHHHHHHHH
Confidence 9999999999999998885 444444433
No 40
>2fo7_A Synthetic consensus TPR protein; tetratricopeptide repeat, consensus protein, superhelix, de novo protein; 2.30A {Synthetic} SCOP: k.38.1.1 PDB: 2hyz_A
Probab=99.85 E-value=5.6e-20 Score=95.62 Aligned_cols=112 Identities=20% Similarity=0.306 Sum_probs=105.7
Q ss_pred ccchhcHHHHHHHHHHHHhhCCChhHHHHHHHHHHHhhcChhhHHHHHHHHhccCCCCHHHHHHHHHHHHHhcCCHHHHH
Q psy12719 4 PGDRERVEQSLKEFRNFVDTHSNVVEACTLFAQVLVDQEDFDGAEEYFNRSIRVDPENASLYVHRAMLMLQARGNVDEAI 83 (116)
Q Consensus 4 ~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~a~ 83 (116)
+...|++++|+..+++++...|.+..++..+|.++...|++++|...+++++...|.++.++..+|.++.. .|++++|.
T Consensus 11 ~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~l~~~~~~-~~~~~~A~ 89 (136)
T 2fo7_A 11 YYKQGDYDEAIEYYQKALELDPRSAEAWYNLGNAYYKQGDYDEAIEYYQKALELDPRSAEAWYNLGNAYYK-QGDYDEAI 89 (136)
T ss_dssp HHHHTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHT-TTCHHHHH
T ss_pred HHHcCcHHHHHHHHHHHHHcCCcchhHHHHHHHHHHHhcCHHHHHHHHHHHHHHCCCchHHHHHHHHHHHH-hcCHHHHH
Confidence 45678999999999999999999999999999999999999999999999999999999999999999777 89999999
Q ss_pred HHHHHHHhcCCCcHHHHHHHHHHHHhhcccccC
Q psy12719 84 KLIEKAISIDKSCMFAYETLGTIEVQRTFVVLW 116 (116)
Q Consensus 84 ~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~a 116 (116)
..+.+++...|.++.++..++.++...|++++|
T Consensus 90 ~~~~~~~~~~~~~~~~~~~la~~~~~~~~~~~A 122 (136)
T 2fo7_A 90 EYYQKALELDPRSAEAWYNLGNAYYKQGDYDEA 122 (136)
T ss_dssp HHHHHHHHHCTTCHHHHHHHHHHHHTTTCHHHH
T ss_pred HHHHHHHHhCCCChHHHHHHHHHHHHHccHHHH
Confidence 999999999999999999999999999988764
No 41
>3as5_A MAMA; tetratricopeptide repeats (TPR) containing protein, TPR PROT protein-protein interactions, protein binding; 2.00A {Magnetospirillum magnetotacticum} PDB: 3as4_A 3asd_A 3asg_A 3ash_A 3as8_A 3asf_A
Probab=99.85 E-value=6.6e-20 Score=100.01 Aligned_cols=112 Identities=13% Similarity=0.077 Sum_probs=93.5
Q ss_pred ccchhcHHHHHHHHHHHHhhCCChhHHHHHHHHHHHhhcChhhHHHHHHHHhccCCCCHHHHHHHHHHHHHhcCCHHHHH
Q psy12719 4 PGDRERVEQSLKEFRNFVDTHSNVVEACTLFAQVLVDQEDFDGAEEYFNRSIRVDPENASLYVHRAMLMLQARGNVDEAI 83 (116)
Q Consensus 4 ~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~a~ 83 (116)
+...|++++|+..+++++...|.+..++..+|.++...|++++|...+++++...|.++.++..+|.++.. .|++++|+
T Consensus 52 ~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~a~~~~~-~~~~~~A~ 130 (186)
T 3as5_A 52 YVKTGAVDRGTELLERSLADAPDNVKVATVLGLTYVQVQKYDLAVPLLIKVAEANPINFNVRFRLGVALDN-LGRFDEAI 130 (186)
T ss_dssp HHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHH-TTCHHHHH
T ss_pred HHHcCCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHhcCHHHHHHHHHHHHhcCcHhHHHHHHHHHHHHH-cCcHHHHH
Confidence 44577888888888888888888888888888888888888888888888888888888888888888776 78888888
Q ss_pred HHHHHHHhcCCCcHHHHHHHHHHHHhhcccccC
Q psy12719 84 KLIEKAISIDKSCMFAYETLGTIEVQRTFVVLW 116 (116)
Q Consensus 84 ~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~a 116 (116)
..+++++...|.++.++..+|.++...|++++|
T Consensus 131 ~~~~~~~~~~~~~~~~~~~la~~~~~~~~~~~A 163 (186)
T 3as5_A 131 DSFKIALGLRPNEGKVHRAIAFSYEQMGRHEEA 163 (186)
T ss_dssp HHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHH
T ss_pred HHHHHHHhcCccchHHHHHHHHHHHHcCCHHHH
Confidence 888888888888888888888888888887653
No 42
>2xev_A YBGF; tetratricopeptide, alpha-helical, metal binding; 1.57A {Xanthomonas campestris}
Probab=99.84 E-value=2.1e-19 Score=93.47 Aligned_cols=108 Identities=15% Similarity=0.128 Sum_probs=97.4
Q ss_pred ccchhcHHHHHHHHHHHHhhCCChh---HHHHHHHHHHHhhcChhhHHHHHHHHhccCCCC---HHHHHHHHHHHHHhcC
Q psy12719 4 PGDRERVEQSLKEFRNFVDTHSNVV---EACTLFAQVLVDQEDFDGAEEYFNRSIRVDPEN---ASLYVHRAMLMLQARG 77 (116)
Q Consensus 4 ~~~~~~~~~A~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~A~~~~~~a~~~~~~~---~~~~~~~~~~~~~~~~ 77 (116)
+...|++++|+..|++++..+|+++ .+++.+|.++...|++++|+..|++++..+|++ +.+++.+|.++.. .|
T Consensus 12 ~~~~~~~~~A~~~~~~~~~~~p~~~~~~~~~~~lg~~~~~~~~~~~A~~~~~~~~~~~p~~~~~~~~~~~la~~~~~-~g 90 (129)
T 2xev_A 12 ALKNGKYDDASQLFLSFLELYPNGVYTPNALYWLGESYYATRNFQLAEAQFRDLVSRYPTHDKAAGGLLKLGLSQYG-EG 90 (129)
T ss_dssp HHHTTCHHHHHHHHHHHHHHCSSSTTHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTSTTHHHHHHHHHHHHHH-TT
T ss_pred HHHhCCHHHHHHHHHHHHHHCCCCcccHHHHHHHHHHHHHhccHHHHHHHHHHHHHHCCCCcccHHHHHHHHHHHHH-cC
Confidence 4568999999999999999999988 799999999999999999999999999999999 8899999999888 99
Q ss_pred CHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHhhcc
Q psy12719 78 NVDEAIKLIEKAISIDKSCMFAYETLGTIEVQRTF 112 (116)
Q Consensus 78 ~~~~a~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~ 112 (116)
++++|+..+++++...|+++.+......+....++
T Consensus 91 ~~~~A~~~~~~~~~~~p~~~~~~~a~~~l~~l~~~ 125 (129)
T 2xev_A 91 KNTEAQQTLQQVATQYPGSDAARVAQERLQSIRLG 125 (129)
T ss_dssp CHHHHHHHHHHHHHHSTTSHHHHHHHHHHHHHC--
T ss_pred CHHHHHHHHHHHHHHCCCChHHHHHHHHHHHHHhh
Confidence 99999999999999999998887777766655444
No 43
>1kt0_A FKBP51, 51 kDa FK506-binding protein; FKBP-like ppiase, TPR repeats, isomerase; 2.70A {Homo sapiens} SCOP: a.118.8.1 d.26.1.1 d.26.1.1 PDB: 1kt1_A 3o5d_A
Probab=99.84 E-value=2.2e-20 Score=115.24 Aligned_cols=111 Identities=13% Similarity=0.073 Sum_probs=101.0
Q ss_pred ccchhcHHHHHHHHHHHHhhCCCh---------------hHHHHHHHHHHHhhcChhhHHHHHHHHhccCCCCHHHHHHH
Q psy12719 4 PGDRERVEQSLKEFRNFVDTHSNV---------------VEACTLFAQVLVDQEDFDGAEEYFNRSIRVDPENASLYVHR 68 (116)
Q Consensus 4 ~~~~~~~~~A~~~~~~~~~~~~~~---------------~~~~~~~~~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~~ 68 (116)
+...|+|++|+..|.+++..+|.+ ..++.++|.++...|++++|+..|++++.++|+++.+++++
T Consensus 278 ~~~~g~~~~A~~~y~~Al~~~p~~~~~~~~~~~~~~~~~~~~~~nla~~~~~~g~~~~A~~~~~~al~~~p~~~~a~~~~ 357 (457)
T 1kt0_A 278 YFKGGKYMQAVIQYGKIVSWLEMEYGLSEKESKASESFLLAAFLNLAMCYLKLREYTKAVECCDKALGLDSANEKGLYRR 357 (457)
T ss_dssp HHHTTCHHHHHHHHHHHHHHHTTCCSCCHHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSTTCHHHHHHH
T ss_pred HHhCCCHHHHHHHHHHHHHHhcccccCChHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHhcCCccHHHHHHH
Confidence 456899999999999999999998 68999999999999999999999999999999999999999
Q ss_pred HHHHHHhcCCHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHhhccccc
Q psy12719 69 AMLMLQARGNVDEAIKLIEKAISIDKSCMFAYETLGTIEVQRTFVVL 115 (116)
Q Consensus 69 ~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~ 115 (116)
|.++.. +|++++|+..|+++++++|++..++..++.++...+++++
T Consensus 358 g~a~~~-~g~~~~A~~~~~~al~l~P~~~~a~~~l~~~~~~~~~~~~ 403 (457)
T 1kt0_A 358 GEAQLL-MNEFESAKGDFEKVLEVNPQNKAARLQISMCQKKAKEHNE 403 (457)
T ss_dssp HHHHHH-TTCHHHHHHHHHHHHTTC----CHHHHHHHHHHHHHHHHH
T ss_pred HHHHHH-ccCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHHHH
Confidence 999888 9999999999999999999999999999999998887654
No 44
>2hr2_A Hypothetical protein; alpha-alpha superhelix fold, structural genomics, joint CENT structural genomics, JCSG, protein structure initiative; 2.54A {Chlorobium tepidum} SCOP: a.118.8.8
Probab=99.84 E-value=4.4e-21 Score=102.71 Aligned_cols=99 Identities=13% Similarity=0.124 Sum_probs=89.0
Q ss_pred ccchhcHHHHHHHHHHHHhhCCC-------hhH-----HHHHHHHHHHhhcChhhHHHHHHHHhcc-------CCCCHHH
Q psy12719 4 PGDRERVEQSLKEFRNFVDTHSN-------VVE-----ACTLFAQVLVDQEDFDGAEEYFNRSIRV-------DPENASL 64 (116)
Q Consensus 4 ~~~~~~~~~A~~~~~~~~~~~~~-------~~~-----~~~~~~~~~~~~~~~~~A~~~~~~a~~~-------~~~~~~~ 64 (116)
+...|+|++|+..|+++++.+|+ +.. +|.++|.++...|++++|+.+|++++.+ +|++..+
T Consensus 21 l~~~g~~eeAi~~Y~kAL~l~p~~~~~~a~~~~~~~a~a~~n~g~al~~Lgr~~eAl~~~~kAL~l~n~~~e~~pd~~~A 100 (159)
T 2hr2_A 21 QLVAGEYDEAAANCRRAMEISHTMPPEEAFDHAGFDAFCHAGLAEALAGLRSFDEALHSADKALHYFNRRGELNQDEGKL 100 (159)
T ss_dssp HHHHTCHHHHHHHHHHHHHHHTTSCTTSCCCHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHCCTTSTHHHH
T ss_pred HHHCCCHHHHHHHHHHHHhhCCCCcchhhhhhccchHHHHHHHHHHHHHCCCHHHHHHHHHHHHHhhhccccCCCchHHH
Confidence 45689999999999999999999 433 9999999999999999999999999999 9999999
Q ss_pred H----HHHHHHHHHhcCCHHHHHHHHHHHHhcCCCcHHHHHHH
Q psy12719 65 Y----VHRAMLMLQARGNVDEAIKLIEKAISIDKSCMFAYETL 103 (116)
Q Consensus 65 ~----~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~l 103 (116)
| +++|.++.. +|++++|+..|++++++.|++......+
T Consensus 101 ~~~~~~~rG~aL~~-lgr~eEAl~~y~kAlel~p~d~~~~~~~ 142 (159)
T 2hr2_A 101 WISAVYSRALALDG-LGRGAEAMPEFKKVVEMIEERKGETPGK 142 (159)
T ss_dssp HHHHHHHHHHHHHH-TTCHHHHHHHHHHHHHHHHHCCSCCTTH
T ss_pred HHHHHHhHHHHHHH-CCCHHHHHHHHHHHHhcCCCcHHHHHHH
Confidence 9 999999877 9999999999999999999875443333
No 45
>2pzi_A Probable serine/threonine-protein kinase PKNG; ATP-recognition, kinase-INH complex, rubredoxin fold, TPR domain, transferase; HET: AXX; 2.40A {Mycobacterium tuberculosis}
Probab=99.84 E-value=6.5e-21 Score=122.30 Aligned_cols=111 Identities=16% Similarity=0.060 Sum_probs=98.9
Q ss_pred ccchhcHHHHHHHHHHHHhhCCChhHHHHHHHHHHHhhcChhhHHHHHHHHhccCCCCHHHHHHHHHHHHHhcCCHHHHH
Q psy12719 4 PGDRERVEQSLKEFRNFVDTHSNVVEACTLFAQVLVDQEDFDGAEEYFNRSIRVDPENASLYVHRAMLMLQARGNVDEAI 83 (116)
Q Consensus 4 ~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~a~ 83 (116)
+...|++++|+..|+++++.+|++..+++.+|.++...|++++|+..|+++++.+|+++.+++++|.++.. .|++++ +
T Consensus 443 ~~~~g~~~~A~~~~~~al~~~p~~~~a~~~lg~~~~~~g~~~~A~~~~~~al~l~P~~~~~~~~lg~~~~~-~g~~~~-~ 520 (681)
T 2pzi_A 443 LLDLGDVAKATRKLDDLAERVGWRWRLVWYRAVAELLTGDYDSATKHFTEVLDTFPGELAPKLALAATAEL-AGNTDE-H 520 (681)
T ss_dssp HHHHTCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHSTTCSHHHHHHHHHHHH-HTCCCT-T
T ss_pred HHhcCCHHHHHHHHHHHhccCcchHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCChHHHHHHHHHHHH-cCChHH-H
Confidence 45678899999999999999999999999999999999999999999999999999999999999999777 899999 9
Q ss_pred HHHHHHHhcCCCcHHHHHHHHHHHHhhcccccC
Q psy12719 84 KLIEKAISIDKSCMFAYETLGTIEVQRTFVVLW 116 (116)
Q Consensus 84 ~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~a 116 (116)
+.|+++++.+|+++.++.++|.++..+|++++|
T Consensus 521 ~~~~~al~~~P~~~~a~~~lg~~~~~~g~~~~A 553 (681)
T 2pzi_A 521 KFYQTVWSTNDGVISAAFGLARARSAEGDRVGA 553 (681)
T ss_dssp CHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHH
T ss_pred HHHHHHHHhCCchHHHHHHHHHHHHHcCCHHHH
Confidence 999999999999998999999999998888764
No 46
>1w3b_A UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase 110; OGT, glcnac, nucleoporin, O-linked glycosylation, TPR repeat, protein binding; 2.85A {Homo sapiens} SCOP: a.118.8.1
Probab=99.83 E-value=9.1e-20 Score=109.85 Aligned_cols=110 Identities=19% Similarity=0.308 Sum_probs=70.1
Q ss_pred cchhcHHHHHHHHHHHHhhCCChhHHHHHHHHHHHhhcChhhHHHHHHHHhccCCCCHHHHHHHHHHHHHhcCCHHHHHH
Q psy12719 5 GDRERVEQSLKEFRNFVDTHSNVVEACTLFAQVLVDQEDFDGAEEYFNRSIRVDPENASLYVHRAMLMLQARGNVDEAIK 84 (116)
Q Consensus 5 ~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ 84 (116)
...|++++|++.|+++++.+|+++.++..+|.++...|++++|+..|++++..+|.++.++..+|.++.. .|++++|+.
T Consensus 248 ~~~g~~~~A~~~~~~al~~~p~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~l~~~~~~-~g~~~~A~~ 326 (388)
T 1w3b_A 248 YEQGLIDLAIDTYRRAIELQPHFPDAYCNLANALKEKGSVAEAEDCYNTALRLCPTHADSLNNLANIKRE-QGNIEEAVR 326 (388)
T ss_dssp HHTTCHHHHHHHHHHHHHTCSSCHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHT-TTCHHHHHH
T ss_pred HHcCCHHHHHHHHHHHHhhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCcccHHHHHHHHHHHHH-cCCHHHHHH
Confidence 3456666666666666666666666666666666666666666666666666666666666666666554 566666666
Q ss_pred HHHHHHhcCCCcHHHHHHHHHHHHhhccccc
Q psy12719 85 LIEKAISIDKSCMFAYETLGTIEVQRTFVVL 115 (116)
Q Consensus 85 ~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~ 115 (116)
.++++++.+|+++.++..++.++...|++++
T Consensus 327 ~~~~al~~~p~~~~~~~~l~~~~~~~g~~~~ 357 (388)
T 1w3b_A 327 LYRKALEVFPEFAAAHSNLASVLQQQGKLQE 357 (388)
T ss_dssp HHHHHTTSCTTCHHHHHHHHHHHHTTTCCHH
T ss_pred HHHHHHhcCCCcHHHHHHHHHHHHHcCCHHH
Confidence 6666666666666666666666666666554
No 47
>2dba_A Smooth muscle cell associated protein-1, isoform 2; tetratricopeptide repeat, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.83 E-value=2.5e-19 Score=94.87 Aligned_cols=106 Identities=16% Similarity=0.161 Sum_probs=99.1
Q ss_pred ccchhcHHHHHHHHHHHHhhCCCh---hHHHHHHHHHHHhhcChhhHHHHHHHHhccCCCCHHHHHHHHHHHHHhcCCHH
Q psy12719 4 PGDRERVEQSLKEFRNFVDTHSNV---VEACTLFAQVLVDQEDFDGAEEYFNRSIRVDPENASLYVHRAMLMLQARGNVD 80 (116)
Q Consensus 4 ~~~~~~~~~A~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (116)
+...|++++|+..|++++..+|++ ..++..+|.++...|++++|+..+++++..+|.++.+++.+|.++.. .|+++
T Consensus 38 ~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~a~~~~~-~~~~~ 116 (148)
T 2dba_A 38 LFKCGDYGGALAAYTQALGLDATPQDQAVLHRNRAACHLKLEDYDKAETEASKAIEKDGGDVKALYRRSQALEK-LGRLD 116 (148)
T ss_dssp HHTTTCHHHHHHHHHHHHTSCCCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHTSCCHHHHHHHHHHHHH-HTCHH
T ss_pred HHHhCCHHHHHHHHHHHHHHcccchHHHHHHHHHHHHHHHHccHHHHHHHHHHHHhhCccCHHHHHHHHHHHHH-cCCHH
Confidence 457899999999999999999998 88999999999999999999999999999999999999999999888 89999
Q ss_pred HHHHHHHHHHhcCCCcHHHHHHHHHHHHhh
Q psy12719 81 EAIKLIEKAISIDKSCMFAYETLGTIEVQR 110 (116)
Q Consensus 81 ~a~~~~~~~~~~~~~~~~~~~~l~~~~~~~ 110 (116)
+|+..+++++..+|+++.++..++.+....
T Consensus 117 ~A~~~~~~al~~~p~~~~~~~~l~~~~~~~ 146 (148)
T 2dba_A 117 QAVLDLQRCVSLEPKNKVFQEALRNISGPS 146 (148)
T ss_dssp HHHHHHHHHHHHCSSCHHHHHHHHHHHCSC
T ss_pred HHHHHHHHHHHcCCCcHHHHHHHHHHHhhc
Confidence 999999999999999999999888876543
No 48
>3uq3_A Heat shock protein STI1; HSP90, peptide binding, chaperone; 2.60A {Saccharomyces cerevisiae}
Probab=99.83 E-value=9.1e-20 Score=104.06 Aligned_cols=108 Identities=22% Similarity=0.206 Sum_probs=94.9
Q ss_pred hcHHHHHHHHHHHHhhCCChhHHHHHHHHHHHhhcChhhHHHHHHHHhccCCCCHHHHHHHHHHHHHhcCCHHHHHHHHH
Q psy12719 8 ERVEQSLKEFRNFVDTHSNVVEACTLFAQVLVDQEDFDGAEEYFNRSIRVDPENASLYVHRAMLMLQARGNVDEAIKLIE 87 (116)
Q Consensus 8 ~~~~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~ 87 (116)
|++++|+..+++++..+|.++.++..+|.++...|++++|+..+++++..+|.++.++..+|.++.. .|++++|+..+.
T Consensus 119 ~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~l~~~~~~-~~~~~~A~~~~~ 197 (258)
T 3uq3_A 119 RNAEKELKKAEAEAYVNPEKAEEARLEGKEYFTKSDWPNAVKAYTEMIKRAPEDARGYSNRAAALAK-LMSFPEAIADCN 197 (258)
T ss_dssp HHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHH-TTCHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHcCcchHHHHHHHHHHHHHhcCHHHHHHHHHHHHhcCcccHHHHHHHHHHHHH-hCCHHHHHHHHH
Confidence 3444444444444447888889999999999999999999999999999999999999999999888 899999999999
Q ss_pred HHHhcCCCcHHHHHHHHHHHHhhcccccC
Q psy12719 88 KAISIDKSCMFAYETLGTIEVQRTFVVLW 116 (116)
Q Consensus 88 ~~~~~~~~~~~~~~~l~~~~~~~~~~~~a 116 (116)
++++.+|+++.++..+|.++...|++++|
T Consensus 198 ~al~~~~~~~~~~~~l~~~~~~~g~~~~A 226 (258)
T 3uq3_A 198 KAIEKDPNFVRAYIRKATAQIAVKEYASA 226 (258)
T ss_dssp HHHHHCTTCHHHHHHHHHHHHHTTCHHHH
T ss_pred HHHHhCHHHHHHHHHHHHHHHHHhhHHHH
Confidence 99999999999999999999999998764
No 49
>1xnf_A Lipoprotein NLPI; TPR, tetratricopeptide, structural genomi unknown function; 1.98A {Escherichia coli} SCOP: a.118.8.1
Probab=99.83 E-value=9.7e-20 Score=104.94 Aligned_cols=112 Identities=13% Similarity=0.096 Sum_probs=96.0
Q ss_pred ccchhcHHHHHHHHHHHHhhC----CChhHHHHHHHHHHHhhcChhhHHHHHHHHhccCCCCHHHHHHHHHHHHHhcCCH
Q psy12719 4 PGDRERVEQSLKEFRNFVDTH----SNVVEACTLFAQVLVDQEDFDGAEEYFNRSIRVDPENASLYVHRAMLMLQARGNV 79 (116)
Q Consensus 4 ~~~~~~~~~A~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~ 79 (116)
....+++++|+..++++++.. |.++.++..+|.++...|++++|+..|++++..+|.++.++..+|.++.. .|++
T Consensus 15 ~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~la~~~~~-~~~~ 93 (275)
T 1xnf_A 15 LQPTLQQEVILARMEQILASRALTDDERAQLLYERGVLYDSLGLRALARNDFSQALAIRPDMPEVFNYLGIYLTQ-AGNF 93 (275)
T ss_dssp CCCCHHHHHHHHHHHHHHTSSCCCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHH-TTCH
T ss_pred cCccchHHHHHHHHHHHHhcccccCchhHHHHHHHHHHHHHcccHHHHHHHHHHHHHcCCCcHHHHHHHHHHHHH-ccCH
Confidence 355688999999999988873 45677888899999999999999999999999999988899999998777 8999
Q ss_pred HHHHHHHHHHHhcCCCcHHHHHHHHHHHHhhcccccC
Q psy12719 80 DEAIKLIEKAISIDKSCMFAYETLGTIEVQRTFVVLW 116 (116)
Q Consensus 80 ~~a~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~a 116 (116)
++|+..+++++..+|+++.++..+|.++...|++++|
T Consensus 94 ~~A~~~~~~al~~~~~~~~~~~~la~~~~~~g~~~~A 130 (275)
T 1xnf_A 94 DAAYEAFDSVLELDPTYNYAHLNRGIALYYGGRDKLA 130 (275)
T ss_dssp HHHHHHHHHHHHHCTTCTHHHHHHHHHHHHTTCHHHH
T ss_pred HHHHHHHHHHHhcCccccHHHHHHHHHHHHhccHHHH
Confidence 9999999999999998888899999999888887754
No 50
>1w3b_A UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase 110; OGT, glcnac, nucleoporin, O-linked glycosylation, TPR repeat, protein binding; 2.85A {Homo sapiens} SCOP: a.118.8.1
Probab=99.83 E-value=1.8e-19 Score=108.58 Aligned_cols=110 Identities=21% Similarity=0.269 Sum_probs=63.5
Q ss_pred cchhcHHHHHHHHHHHHhhCCChhHHHHHHHHHHHhhcChhhHHHHHHHHhccCCCCHHHHHHHHHHHHHhcCCHHHHHH
Q psy12719 5 GDRERVEQSLKEFRNFVDTHSNVVEACTLFAQVLVDQEDFDGAEEYFNRSIRVDPENASLYVHRAMLMLQARGNVDEAIK 84 (116)
Q Consensus 5 ~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ 84 (116)
...|++++|+..|++++..+|++..++..+|.++...|++++|+..+++++..+|+++.++..+|.++.. .|++++|+.
T Consensus 180 ~~~g~~~~A~~~~~~al~~~p~~~~~~~~lg~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~l~~~~~~-~g~~~~A~~ 258 (388)
T 1w3b_A 180 NAQGEIWLAIHHFEKAVTLDPNFLDAYINLGNVLKEARIFDRAVAAYLRALSLSPNHAVVHGNLACVYYE-QGLIDLAID 258 (388)
T ss_dssp HTTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHTTTCTTHHHHHHHHHHHHCTTCHHHHHHHHHHHHH-TTCHHHHHH
T ss_pred HHcCCHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCcCCHHHHHHHHHHHHH-cCCHHHHHH
Confidence 3445555555555555555555555555555555555555555555555555555555555555555554 566666666
Q ss_pred HHHHHHhcCCCcHHHHHHHHHHHHhhccccc
Q psy12719 85 LIEKAISIDKSCMFAYETLGTIEVQRTFVVL 115 (116)
Q Consensus 85 ~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~ 115 (116)
.+++++..+|+++.++..++.++...|++++
T Consensus 259 ~~~~al~~~p~~~~~~~~l~~~~~~~g~~~~ 289 (388)
T 1w3b_A 259 TYRRAIELQPHFPDAYCNLANALKEKGSVAE 289 (388)
T ss_dssp HHHHHHHTCSSCHHHHHHHHHHHHHHSCHHH
T ss_pred HHHHHHhhCCCCHHHHHHHHHHHHHcCCHHH
Confidence 6666666666555555566666555555543
No 51
>1fch_A Peroxisomal targeting signal 1 receptor; protein-peptide complex, tetratricopeptide repeat, TPR, helical repeat, signaling protein; 2.20A {Homo sapiens} SCOP: a.118.8.1 PDB: 2j9q_A 3imz_B* 3r9a_B* 2c0m_A 2c0l_A
Probab=99.83 E-value=1e-19 Score=108.62 Aligned_cols=109 Identities=11% Similarity=0.104 Sum_probs=54.8
Q ss_pred chhcHHHHHHHHHHHHhhCCChhHHHHHHHHHHHhhcChhhHHHHHHHHhccCCCCHHHHHHHHHHHHHhcCCHHHHHHH
Q psy12719 6 DRERVEQSLKEFRNFVDTHSNVVEACTLFAQVLVDQEDFDGAEEYFNRSIRVDPENASLYVHRAMLMLQARGNVDEAIKL 85 (116)
Q Consensus 6 ~~~~~~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~ 85 (116)
..|++++|+..+++++..+|+++.++..+|.++...|++++|+..|++++..+|.++.++..+|.++.. .|++++|+..
T Consensus 229 ~~g~~~~A~~~~~~al~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~l~~~~~~-~g~~~~A~~~ 307 (368)
T 1fch_A 229 LSGEYDKAVDCFTAALSVRPNDYLLWNKLGATLANGNQSEEAVAAYRRALELQPGYIRSRYNLGISCIN-LGAHREAVEH 307 (368)
T ss_dssp HTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHH-HTCHHHHHHH
T ss_pred HcCCHHHHHHHHHHHHHhCcCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCcHHHHHHHHHHHHH-CCCHHHHHHH
Confidence 344455555555555555555555555555555555555555555555555555555555555555444 4555555555
Q ss_pred HHHHHhcCCCc-----------HHHHHHHHHHHHhhccccc
Q psy12719 86 IEKAISIDKSC-----------MFAYETLGTIEVQRTFVVL 115 (116)
Q Consensus 86 ~~~~~~~~~~~-----------~~~~~~l~~~~~~~~~~~~ 115 (116)
+++++...|++ ..+|..++.++...|++++
T Consensus 308 ~~~al~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~ 348 (368)
T 1fch_A 308 FLEALNMQRKSRGPRGEGGAMSENIWSTLRLALSMLGQSDA 348 (368)
T ss_dssp HHHHHHHHHTC------CCCCCHHHHHHHHHHHHHHTCGGG
T ss_pred HHHHHHhCCCCCCccccccchhhHHHHHHHHHHHHhCChHh
Confidence 55555544444 4445555555555554443
No 52
>4abn_A Tetratricopeptide repeat protein 5; P53 cofactor, stress-response, DNA repair, gene regulation; 2.05A {Mus musculus}
Probab=99.83 E-value=8.1e-20 Score=113.15 Aligned_cols=108 Identities=14% Similarity=0.082 Sum_probs=104.1
Q ss_pred hcHHHHHHHHHHHHhhCCChhHHHHHHHHHHHhh--------cChhhHHHHHHHHhccCC---CCHHHHHHHHHHHHHhc
Q psy12719 8 ERVEQSLKEFRNFVDTHSNVVEACTLFAQVLVDQ--------EDFDGAEEYFNRSIRVDP---ENASLYVHRAMLMLQAR 76 (116)
Q Consensus 8 ~~~~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~A~~~~~~a~~~~~---~~~~~~~~~~~~~~~~~ 76 (116)
|++++|+..|+++++.+|+++.+|..+|.++... |++++|+..|++++..+| .++.+++++|.++.. .
T Consensus 193 g~~~~A~~~~~~al~~~p~~~~~~~~lg~~~~~~~~~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~~~~lg~~~~~-~ 271 (474)
T 4abn_A 193 RHVMDSVRQAKLAVQMDVLDGRSWYILGNAYLSLYFNTGQNPKISQQALSAYAQAEKVDRKASSNPDLHLNRATLHKY-E 271 (474)
T ss_dssp HHHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHCGGGGGCHHHHHHHHHHHHH-T
T ss_pred hhHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHhhccccchHHHHHHHHHHHHHhCCCcccCHHHHHHHHHHHHH-c
Confidence 9999999999999999999999999999999999 999999999999999999 999999999999888 8
Q ss_pred CCHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHhhcccccC
Q psy12719 77 GNVDEAIKLIEKAISIDKSCMFAYETLGTIEVQRTFVVLW 116 (116)
Q Consensus 77 ~~~~~a~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~a 116 (116)
|++++|++.++++++.+|+++.++..++.++...|++++|
T Consensus 272 g~~~~A~~~~~~al~l~p~~~~a~~~l~~~~~~lg~~~eA 311 (474)
T 4abn_A 272 ESYGEALEGFSQAAALDPAWPEPQQREQQLLEFLSRLTSL 311 (474)
T ss_dssp TCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999999999987753
No 53
>2q7f_A YRRB protein; TPR, protein binding; 2.49A {Bacillus subtilis} SCOP: k.38.1.1
Probab=99.83 E-value=1.6e-19 Score=102.45 Aligned_cols=108 Identities=16% Similarity=0.244 Sum_probs=54.3
Q ss_pred chhcHHHHHHHHHHHHhhCCChhHHHHHHHHHHHhhcChhhHHHHHHHHhccCCCCHHHHHHHHHHHHHhcCCHHHHHHH
Q psy12719 6 DRERVEQSLKEFRNFVDTHSNVVEACTLFAQVLVDQEDFDGAEEYFNRSIRVDPENASLYVHRAMLMLQARGNVDEAIKL 85 (116)
Q Consensus 6 ~~~~~~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~ 85 (116)
..|++++|+..+++++..+|.+..++..+|.++...|++++|+..+++++...|.++.++..+|.++.. .|++++|+..
T Consensus 69 ~~~~~~~A~~~~~~~~~~~~~~~~~~~~la~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~a~~~~~-~~~~~~A~~~ 147 (243)
T 2q7f_A 69 SVNELERALAFYDKALELDSSAATAYYGAGNVYVVKEMYKEAKDMFEKALRAGMENGDLFYMLGTVLVK-LEQPKLALPY 147 (243)
T ss_dssp HTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHTCCSHHHHHHHHHHHHH-TSCHHHHHHH
T ss_pred HcCCHHHHHHHHHHHHHcCCcchHHHHHHHHHHHHhccHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHH-hccHHHHHHH
Confidence 344455555555555555555555555555555555555555555555555555555555555554444 4555555555
Q ss_pred HHHHHhcCCCcHHHHHHHHHHHHhhcccc
Q psy12719 86 IEKAISIDKSCMFAYETLGTIEVQRTFVV 114 (116)
Q Consensus 86 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~~ 114 (116)
+++++...|+++.++..+|.++...|+++
T Consensus 148 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~~ 176 (243)
T 2q7f_A 148 LQRAVELNENDTEARFQFGMCLANEGMLD 176 (243)
T ss_dssp HHHHHHHCTTCHHHHHHHHHHHHHHTCCH
T ss_pred HHHHHHhCCccHHHHHHHHHHHHHcCCHH
Confidence 55555555544444555555554444443
No 54
>2q7f_A YRRB protein; TPR, protein binding; 2.49A {Bacillus subtilis} SCOP: k.38.1.1
Probab=99.83 E-value=2.9e-19 Score=101.33 Aligned_cols=112 Identities=15% Similarity=0.132 Sum_probs=86.0
Q ss_pred ccchhcHHHHHHHHHHHHhhCCChhHHHHHHHHHHHhhcChhhHHHHHHHHhccCCCCHHHHHHHHHHHHHhcCCHHHHH
Q psy12719 4 PGDRERVEQSLKEFRNFVDTHSNVVEACTLFAQVLVDQEDFDGAEEYFNRSIRVDPENASLYVHRAMLMLQARGNVDEAI 83 (116)
Q Consensus 4 ~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~a~ 83 (116)
+...|++++|+..+++++..+|.+..++..+|.++...|++++|+..+++++...|.++.++..+|.++.. .|++++|+
T Consensus 101 ~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~l~~~~~~-~~~~~~A~ 179 (243)
T 2q7f_A 101 YVVKEMYKEAKDMFEKALRAGMENGDLFYMLGTVLVKLEQPKLALPYLQRAVELNENDTEARFQFGMCLAN-EGMLDEAL 179 (243)
T ss_dssp HHHTTCHHHHHHHHHHHHHHTCCSHHHHHHHHHHHHHTSCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHH-HTCCHHHH
T ss_pred HHHhccHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHhccHHHHHHHHHHHHHhCCccHHHHHHHHHHHHH-cCCHHHHH
Confidence 34567777777778777777777777777777777777788888888877777777777777777777666 67777788
Q ss_pred HHHHHHHhcCCCcHHHHHHHHHHHHhhcccccC
Q psy12719 84 KLIEKAISIDKSCMFAYETLGTIEVQRTFVVLW 116 (116)
Q Consensus 84 ~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~a 116 (116)
..+++++...|+++.++..++.++...|++++|
T Consensus 180 ~~~~~~~~~~~~~~~~~~~la~~~~~~~~~~~A 212 (243)
T 2q7f_A 180 SQFAAVTEQDPGHADAFYNAGVTYAYKENREKA 212 (243)
T ss_dssp HHHHHHHHHCTTCHHHHHHHHHHHHHTTCTTHH
T ss_pred HHHHHHHHhCcccHHHHHHHHHHHHHccCHHHH
Confidence 777777777777777777777777777777653
No 55
>3upv_A Heat shock protein STI1; TPR-fold, adaptor protein for HSP70 and HSP90, C-terminal PA HSP70, peptide binding protein; 1.60A {Saccharomyces cerevisiae}
Probab=99.83 E-value=1.7e-19 Score=93.67 Aligned_cols=91 Identities=24% Similarity=0.215 Sum_probs=86.4
Q ss_pred CChhHHHHHHHHHHHhhcChhhHHHHHHHHhccCCCCHHHHHHHHHHHHHhcCCHHHHHHHHHHHHhcCCCcHHHHHHHH
Q psy12719 25 SNVVEACTLFAQVLVDQEDFDGAEEYFNRSIRVDPENASLYVHRAMLMLQARGNVDEAIKLIEKAISIDKSCMFAYETLG 104 (116)
Q Consensus 25 ~~~~~~~~~~~~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~l~ 104 (116)
|..+..+..+|..++..|++++|+..|++++..+|.++.+++++|.++.. .|++++|+..+++++..+|+++.++..+|
T Consensus 1 p~~a~~~~~~g~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~a~~~~~-~~~~~~A~~~~~~al~~~p~~~~~~~~lg 79 (126)
T 3upv_A 1 SMKAEEARLEGKEYFTKSDWPNAVKAYTEMIKRAPEDARGYSNRAAALAK-LMSFPEAIADCNKAIEKDPNFVRAYIRKA 79 (126)
T ss_dssp CHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHH-TTCHHHHHHHHHHHHHHCTTCHHHHHHHH
T ss_pred CchHHHHHHHHHHHHHhcCHHHHHHHHHHHHHhCCCChHHHHHHHHHHHH-hcCHHHHHHHHHHHHHhCCCcHHHHHHHH
Confidence 45678899999999999999999999999999999999999999999888 99999999999999999999999999999
Q ss_pred HHHHhhcccccC
Q psy12719 105 TIEVQRTFVVLW 116 (116)
Q Consensus 105 ~~~~~~~~~~~a 116 (116)
.++...|++++|
T Consensus 80 ~~~~~~~~~~~A 91 (126)
T 3upv_A 80 TAQIAVKEYASA 91 (126)
T ss_dssp HHHHHTTCHHHH
T ss_pred HHHHHHhCHHHH
Confidence 999999998764
No 56
>2vsy_A XCC0866; transferase, glycosyl transferase, GT-B, OGT, protein O-GLCN; HET: NHE; 2.10A {Xanthomonas campestris PV} PDB: 2jlb_A* 2xgm_A* 2xgo_A* 2xgs_A* 2vsn_A*
Probab=99.83 E-value=1.8e-19 Score=113.48 Aligned_cols=111 Identities=11% Similarity=0.046 Sum_probs=94.1
Q ss_pred ccchhcHHHHHHHHHHHHhhCCChhHHHHHHHHHHHhhcChhhHHHHHHHHhccCCCCHHHHHHHHHHHHHhcCCHHHHH
Q psy12719 4 PGDRERVEQSLKEFRNFVDTHSNVVEACTLFAQVLVDQEDFDGAEEYFNRSIRVDPENASLYVHRAMLMLQARGNVDEAI 83 (116)
Q Consensus 4 ~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~a~ 83 (116)
+...|++++|++.++++++.+|++..++..+|.++...|++++|+..++++++.+|++..+++.+|.++.. .|++++|+
T Consensus 33 ~~~~g~~~~A~~~~~~al~~~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~la~~~~~-~g~~~~A~ 111 (568)
T 2vsy_A 33 ELGMGDTTAGEMAVQRGLALHPGHPEAVARLGRVRWTQQRHAEAAVLLQQASDAAPEHPGIALWLGHALED-AGQAEAAA 111 (568)
T ss_dssp HHHHTCHHHHHHHHHHHHTTSTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHH-TTCHHHHH
T ss_pred HHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHH-cCCHHHHH
Confidence 45678888888888888888888888888888888888888888888888888888888888888888777 78888888
Q ss_pred HHHHHHHhcCCCcHHHHHHHHHHHHhh---ccccc
Q psy12719 84 KLIEKAISIDKSCMFAYETLGTIEVQR---TFVVL 115 (116)
Q Consensus 84 ~~~~~~~~~~~~~~~~~~~l~~~~~~~---~~~~~ 115 (116)
+.++++++.+|+++.++..++.++... |++++
T Consensus 112 ~~~~~al~~~p~~~~~~~~l~~~~~~~~~~g~~~~ 146 (568)
T 2vsy_A 112 AAYTRAHQLLPEEPYITAQLLNWRRRLCDWRALDV 146 (568)
T ss_dssp HHHHHHHHHCTTCHHHHHHHHHHHHHTTCCTTHHH
T ss_pred HHHHHHHHhCCCCHHHHHHHHHHHHHhhccccHHH
Confidence 888888888888888888888888888 66654
No 57
>3as5_A MAMA; tetratricopeptide repeats (TPR) containing protein, TPR PROT protein-protein interactions, protein binding; 2.00A {Magnetospirillum magnetotacticum} PDB: 3as4_A 3asd_A 3asg_A 3ash_A 3as8_A 3asf_A
Probab=99.83 E-value=1.2e-19 Score=98.94 Aligned_cols=112 Identities=16% Similarity=0.108 Sum_probs=106.5
Q ss_pred ccchhcHHHHHHHHHHHHhhCCChhHHHHHHHHHHHhhcChhhHHHHHHHHhccCCCCHHHHHHHHHHHHHhcCCHHHHH
Q psy12719 4 PGDRERVEQSLKEFRNFVDTHSNVVEACTLFAQVLVDQEDFDGAEEYFNRSIRVDPENASLYVHRAMLMLQARGNVDEAI 83 (116)
Q Consensus 4 ~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~a~ 83 (116)
+...|++++|+..+++++..+|.+..++..+|.++...|++++|+..+++++...|.++.++..+|.++.. .|++++|.
T Consensus 18 ~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~a~~~~~-~~~~~~A~ 96 (186)
T 3as5_A 18 HAKAGRYSQAVMLLEQVYDADAFDVDVALHLGIAYVKTGAVDRGTELLERSLADAPDNVKVATVLGLTYVQ-VQKYDLAV 96 (186)
T ss_dssp HHHHTCHHHHHHHHTTTCCTTSCCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHH-HTCHHHHH
T ss_pred HHHhcCHHHHHHHHHHHHHhCccChHHHHHHHHHHHHcCCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHH-hcCHHHHH
Confidence 45679999999999999999999999999999999999999999999999999999999999999999888 89999999
Q ss_pred HHHHHHHhcCCCcHHHHHHHHHHHHhhcccccC
Q psy12719 84 KLIEKAISIDKSCMFAYETLGTIEVQRTFVVLW 116 (116)
Q Consensus 84 ~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~a 116 (116)
..+++++...|.++.++..+|.++...|++++|
T Consensus 97 ~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~A 129 (186)
T 3as5_A 97 PLLIKVAEANPINFNVRFRLGVALDNLGRFDEA 129 (186)
T ss_dssp HHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHH
T ss_pred HHHHHHHhcCcHhHHHHHHHHHHHHHcCcHHHH
Confidence 999999999999999999999999999998764
No 58
>4abn_A Tetratricopeptide repeat protein 5; P53 cofactor, stress-response, DNA repair, gene regulation; 2.05A {Mus musculus}
Probab=99.83 E-value=5.6e-20 Score=113.87 Aligned_cols=112 Identities=13% Similarity=0.098 Sum_probs=104.6
Q ss_pred cccchhcH-HHHHHHHHHHHhhCCChhHHHHHHHHHHHhhcChhhHHHHHHHHhccCCCCHHHHHHHHHHHHHhc-----
Q psy12719 3 VPGDRERV-EQSLKEFRNFVDTHSNVVEACTLFAQVLVDQEDFDGAEEYFNRSIRVDPENASLYVHRAMLMLQAR----- 76 (116)
Q Consensus 3 ~~~~~~~~-~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~~~~----- 76 (116)
.+...|++ ++|+..|+++++.+|+++.++..+|.++...|++++|+.+|++++..+|+ ..++..+|.++.. .
T Consensus 111 ~~~~~g~~~~~A~~~~~~al~~~p~~~~a~~~lg~~~~~~g~~~~A~~~~~~al~~~p~-~~~~~~lg~~~~~-~~~~~~ 188 (474)
T 4abn_A 111 ALNVTPDYSPEAEVLLSKAVKLEPELVEAWNQLGEVYWKKGDVTSAHTCFSGALTHCKN-KVSLQNLSMVLRQ-LQTDSG 188 (474)
T ss_dssp HHTSSSSCCHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHTCHHHHHHHHHHHHTTCCC-HHHHHHHHHHHTT-CCCSCH
T ss_pred HHHhccccHHHHHHHHHHHHhhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCC-HHHHHHHHHHHHH-hccCCh
Confidence 34667899 99999999999999999999999999999999999999999999999999 7999999999776 8
Q ss_pred ----CCHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHhh--------cccccC
Q psy12719 77 ----GNVDEAIKLIEKAISIDKSCMFAYETLGTIEVQR--------TFVVLW 116 (116)
Q Consensus 77 ----~~~~~a~~~~~~~~~~~~~~~~~~~~l~~~~~~~--------~~~~~a 116 (116)
|++++|+..++++++.+|+++.+|..+|.++... |++++|
T Consensus 189 ~~~~g~~~~A~~~~~~al~~~p~~~~~~~~lg~~~~~~~~~~~~~~g~~~~A 240 (474)
T 4abn_A 189 DEHSRHVMDSVRQAKLAVQMDVLDGRSWYILGNAYLSLYFNTGQNPKISQQA 240 (474)
T ss_dssp HHHHHHHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHHHHTTCCHHHHHHH
T ss_pred hhhhhhHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHhhccccchHHHH
Confidence 9999999999999999999999999999999988 887754
No 59
>1ihg_A Cyclophilin 40; ppiase immunophilin tetratricopeptide, isomerase; 1.80A {Bos taurus} SCOP: a.118.8.1 b.62.1.1 PDB: 1iip_A
Probab=99.83 E-value=1.2e-19 Score=109.41 Aligned_cols=111 Identities=14% Similarity=0.117 Sum_probs=103.8
Q ss_pred ccchhcHHHHHHHHHHHHh----------------hCCChhHHHHHHHHHHHhhcChhhHHHHHHHHhccCCCCHHHHHH
Q psy12719 4 PGDRERVEQSLKEFRNFVD----------------THSNVVEACTLFAQVLVDQEDFDGAEEYFNRSIRVDPENASLYVH 67 (116)
Q Consensus 4 ~~~~~~~~~A~~~~~~~~~----------------~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~ 67 (116)
+...|++++|+..|+++++ .+|....++.++|.++...|++++|+.++++++..+|+++.+++.
T Consensus 233 ~~~~g~~~~Ai~~y~kAl~~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~~~g~~~~A~~~~~~al~~~p~~~~a~~~ 312 (370)
T 1ihg_A 233 FFKSQNWEMAIKKYTKVLRYVEGSRAAAEDADGAKLQPVALSCVLNIGACKLKMSDWQGAVDSCLEALEIDPSNTKALYR 312 (370)
T ss_dssp HHHTTCHHHHHHHHHHHHHHHHHHHHHSCHHHHGGGHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHTTCTTCHHHHHH
T ss_pred HHHhcCHHHHHHHHHHHHHHhhcCccccChHHHHHHHHHHHHHHHHHHHHHHhccCHHHHHHHHHHHHHhCchhHHHHHH
Confidence 4567899999999999998 677788999999999999999999999999999999999999999
Q ss_pred HHHHHHHhcCCHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHhhccccc
Q psy12719 68 RAMLMLQARGNVDEAIKLIEKAISIDKSCMFAYETLGTIEVQRTFVVL 115 (116)
Q Consensus 68 ~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~ 115 (116)
+|.++.. +|++++|+..++++++++|++..++..++.++...++.++
T Consensus 313 lg~~~~~-~g~~~eA~~~l~~Al~l~P~~~~~~~~l~~~~~~~~~~~~ 359 (370)
T 1ihg_A 313 RAQGWQG-LKEYDQALADLKKAQEIAPEDKAIQAELLKVKQKIKAQKD 359 (370)
T ss_dssp HHHHHHH-TTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHH-ccCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHHHH
Confidence 9999888 9999999999999999999999999999999988877654
No 60
>1fch_A Peroxisomal targeting signal 1 receptor; protein-peptide complex, tetratricopeptide repeat, TPR, helical repeat, signaling protein; 2.20A {Homo sapiens} SCOP: a.118.8.1 PDB: 2j9q_A 3imz_B* 3r9a_B* 2c0m_A 2c0l_A
Probab=99.82 E-value=4e-19 Score=106.07 Aligned_cols=110 Identities=12% Similarity=0.109 Sum_probs=105.6
Q ss_pred chhcHHHHHHHHHHHHhhCCC--hhHHHHHHHHHHHhhcChhhHHHHHHHHhccCCCCHHHHHHHHHHHHHhcCCHHHHH
Q psy12719 6 DRERVEQSLKEFRNFVDTHSN--VVEACTLFAQVLVDQEDFDGAEEYFNRSIRVDPENASLYVHRAMLMLQARGNVDEAI 83 (116)
Q Consensus 6 ~~~~~~~A~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~a~ 83 (116)
..|++++|+..+++++..+|. ++.++..+|.++...|++++|+..+++++..+|.++.++..+|.++.. .|++++|+
T Consensus 193 ~~~~~~~A~~~~~~a~~~~p~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~l~~~~~~-~g~~~~A~ 271 (368)
T 1fch_A 193 SDSLFLEVKELFLAAVRLDPTSIDPDVQCGLGVLFNLSGEYDKAVDCFTAALSVRPNDYLLWNKLGATLAN-GNQSEEAV 271 (368)
T ss_dssp HHHHHHHHHHHHHHHHHHSTTSCCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHH-TTCHHHHH
T ss_pred hcccHHHHHHHHHHHHHhCcCcccHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCcCCHHHHHHHHHHHHH-cCCHHHHH
Confidence 578999999999999999999 789999999999999999999999999999999999999999999888 89999999
Q ss_pred HHHHHHHhcCCCcHHHHHHHHHHHHhhcccccC
Q psy12719 84 KLIEKAISIDKSCMFAYETLGTIEVQRTFVVLW 116 (116)
Q Consensus 84 ~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~a 116 (116)
..+++++..+|+++.++..+|.++...|++++|
T Consensus 272 ~~~~~al~~~~~~~~~~~~l~~~~~~~g~~~~A 304 (368)
T 1fch_A 272 AAYRRALELQPGYIRSRYNLGISCINLGAHREA 304 (368)
T ss_dssp HHHHHHHHHCTTCHHHHHHHHHHHHHHTCHHHH
T ss_pred HHHHHHHHhCCCcHHHHHHHHHHHHHCCCHHHH
Confidence 999999999999999999999999999998764
No 61
>3cv0_A Peroxisome targeting signal 1 receptor PEX5; TPR motifs, TPR protein, peroxin 5, PEX5, PTS1 binding domain, protein-peptide complex, receptor; 2.00A {Trypanosoma brucei} PDB: 3cvl_A 3cvn_A 3cvp_A 3cvq_A
Probab=99.82 E-value=6.1e-19 Score=103.61 Aligned_cols=113 Identities=11% Similarity=0.152 Sum_probs=108.3
Q ss_pred cccchhcHHHHHHHHHHHHhhCCChhHHHHHHHHHHHhhcChhhHHHHHHHHhccCCCCHHHHHHHHHHHHHhcCCHHHH
Q psy12719 3 VPGDRERVEQSLKEFRNFVDTHSNVVEACTLFAQVLVDQEDFDGAEEYFNRSIRVDPENASLYVHRAMLMLQARGNVDEA 82 (116)
Q Consensus 3 ~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~a 82 (116)
++...|++++|+..+++++...|.++.++..+|.++...|++++|+..+++++..+|.++.++..+|.++.. .|++++|
T Consensus 147 ~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~la~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~l~~~~~~-~~~~~~A 225 (327)
T 3cv0_A 147 FFAAPNEYRECRTLLHAALEMNPNDAQLHASLGVLYNLSNNYDSAAANLRRAVELRPDDAQLWNKLGATLAN-GNRPQEA 225 (327)
T ss_dssp CTTSHHHHHHHHHHHHHHHHHSTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHH-TTCHHHH
T ss_pred HHHHcccHHHHHHHHHHHHhhCCCCHHHHHHHHHHHHHhccHHHHHHHHHHHHHhCCCcHHHHHHHHHHHHH-cCCHHHH
Confidence 477889999999999999999999999999999999999999999999999999999999999999999888 8999999
Q ss_pred HHHHHHHHhcCCCcHHHHHHHHHHHHhhcccccC
Q psy12719 83 IKLIEKAISIDKSCMFAYETLGTIEVQRTFVVLW 116 (116)
Q Consensus 83 ~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~a 116 (116)
+..++++++..|+++.++..+|.++...|++++|
T Consensus 226 ~~~~~~a~~~~~~~~~~~~~l~~~~~~~g~~~~A 259 (327)
T 3cv0_A 226 LDAYNRALDINPGYVRVMYNMAVSYSNMSQYDLA 259 (327)
T ss_dssp HHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHH
T ss_pred HHHHHHHHHcCCCCHHHHHHHHHHHHHhccHHHH
Confidence 9999999999999999999999999999998764
No 62
>1hh8_A P67PHOX, NCF-2, neutrophil cytosol factor 2; cell cycle, phagocyte oxidase factor, SH3 domain, repeat, TPR repeat cell cycle; HET: FLC; 1.8A {Homo sapiens} SCOP: a.118.8.1 PDB: 1wm5_A 1e96_B*
Probab=99.82 E-value=1.8e-19 Score=100.80 Aligned_cols=109 Identities=20% Similarity=0.196 Sum_probs=100.0
Q ss_pred ccchhcHHHHHHHHHHHHhhCCChhHHHHHHHHHHHhhcChhhHHHHHHHHhccCCCCHHHHHHHHHHHHHhcCCHHHHH
Q psy12719 4 PGDRERVEQSLKEFRNFVDTHSNVVEACTLFAQVLVDQEDFDGAEEYFNRSIRVDPENASLYVHRAMLMLQARGNVDEAI 83 (116)
Q Consensus 4 ~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~a~ 83 (116)
+...|++++|+..|++++ .| ++.++..+|.++...|++++|+..|++++..+|.++.+++.+|.++.. .|++++|+
T Consensus 16 ~~~~~~~~~A~~~~~~a~--~~-~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~lg~~~~~-~~~~~~A~ 91 (213)
T 1hh8_A 16 AADKKDWKGALDAFSAVQ--DP-HSRICFNIGCMYTILKNMTEAEKAFTRSINRDKHLAVAYFQRGMLYYQ-TEKYDLAI 91 (213)
T ss_dssp HHHTTCHHHHHHHHHTSS--SC-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHH-TTCHHHHH
T ss_pred HHHhCCHHHHHHHHHHHc--CC-ChHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCccchHHHHHHHHHHHH-cccHHHHH
Confidence 456799999999999996 33 678999999999999999999999999999999999999999999888 89999999
Q ss_pred HHHHHHHhcCCCcH----------------HHHHHHHHHHHhhcccccC
Q psy12719 84 KLIEKAISIDKSCM----------------FAYETLGTIEVQRTFVVLW 116 (116)
Q Consensus 84 ~~~~~~~~~~~~~~----------------~~~~~l~~~~~~~~~~~~a 116 (116)
..+++++...|++. .++..+|.++...|++++|
T Consensus 92 ~~~~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A 140 (213)
T 1hh8_A 92 KDLKEALIQLRGNQLIDYKILGLQFKLFACEVLYNIAFMYAKKEEWKKA 140 (213)
T ss_dssp HHHHHHHHTTTTCSEEECGGGTBCCEEEHHHHHHHHHHHHHHTTCHHHH
T ss_pred HHHHHHHHhCCCccHHHHHHhccccCccchHHHHHHHHHHHHccCHHHH
Confidence 99999999877655 8999999999999998764
No 63
>3u4t_A TPR repeat-containing protein; structural genomics, PSI- protein structure initiative, northeast structural genomics consortium, NESG; 2.28A {Cytophaga hutchinsonii}
Probab=99.82 E-value=1.5e-19 Score=104.19 Aligned_cols=111 Identities=12% Similarity=0.122 Sum_probs=98.6
Q ss_pred ccchhcHHHHHHHHHHHHhhCCChhHHHHHHHHHHHhhcChhhHHHHHHHHhccCCCC----HHHHHHHHHHHHHhcCCH
Q psy12719 4 PGDRERVEQSLKEFRNFVDTHSNVVEACTLFAQVLVDQEDFDGAEEYFNRSIRVDPEN----ASLYVHRAMLMLQARGNV 79 (116)
Q Consensus 4 ~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~a~~~~~~~----~~~~~~~~~~~~~~~~~~ 79 (116)
+...|++++|+..++++++.+|.+..++..+|.++...|++++|+..+++++. .|.+ ..++..+|.++.. .|++
T Consensus 13 ~~~~~~~~~A~~~~~~~l~~~p~~~~~~~~l~~~~~~~~~~~~A~~~~~~a~~-~~~~~~~~~~~~~~lg~~~~~-~~~~ 90 (272)
T 3u4t_A 13 LFKNNNYAEAIEVFNKLEAKKYNSPYIYNRRAVCYYELAKYDLAQKDIETYFS-KVNATKAKSADFEYYGKILMK-KGQD 90 (272)
T ss_dssp HHTTTCHHHHHHHHHHHHHTTCCCSTTHHHHHHHHHHTTCHHHHHHHHHHHHT-TSCTTTCCHHHHHHHHHHHHH-TTCH
T ss_pred HHHhcCHHHHHHHHHHHHHhCCCcHHHHHHHHHHHHHHhhHHHHHHHHHHHHh-ccCchhHHHHHHHHHHHHHHH-cccH
Confidence 45778999999999999999999999999999999999999999999999998 3333 4458999999887 8999
Q ss_pred HHHHHHHHHHHhcCCCcHHHHHHHHHHHHhhcccccC
Q psy12719 80 DEAIKLIEKAISIDKSCMFAYETLGTIEVQRTFVVLW 116 (116)
Q Consensus 80 ~~a~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~a 116 (116)
++|+..++++++.+|.++.++..+|.++...|++++|
T Consensus 91 ~~A~~~~~~a~~~~~~~~~~~~~l~~~~~~~~~~~~A 127 (272)
T 3u4t_A 91 SLAIQQYQAAVDRDTTRLDMYGQIGSYFYNKGNFPLA 127 (272)
T ss_dssp HHHHHHHHHHHHHSTTCTHHHHHHHHHHHHTTCHHHH
T ss_pred HHHHHHHHHHHhcCcccHHHHHHHHHHHHHccCHHHH
Confidence 9999999999999999999999999999999988764
No 64
>2vq2_A PILW, putative fimbrial biogenesis and twitching motility protein; secretin, TPR repeat, type IV pilus, bacterail virulence; 1.54A {Neisseria meningitidis}
Probab=99.82 E-value=5.5e-19 Score=99.02 Aligned_cols=107 Identities=10% Similarity=0.188 Sum_probs=52.3
Q ss_pred hhcHHHHHHHHHHHHhhCCChhHHHHHHHHHHHhh-cChhhHHHHHHHHhc--cCCCCHHHHHHHHHHHHHhcCCHHHHH
Q psy12719 7 RERVEQSLKEFRNFVDTHSNVVEACTLFAQVLVDQ-EDFDGAEEYFNRSIR--VDPENASLYVHRAMLMLQARGNVDEAI 83 (116)
Q Consensus 7 ~~~~~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~A~~~~~~a~~--~~~~~~~~~~~~~~~~~~~~~~~~~a~ 83 (116)
.|++++|++.+++++..+|.+..++..+|.++... |++++|+..+++++. ..|....++..+|.++.. .|++++|+
T Consensus 55 ~~~~~~A~~~~~~a~~~~~~~~~~~~~l~~~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~~l~~~~~~-~~~~~~A~ 133 (225)
T 2vq2_A 55 LKVNDKAQESFRQALSIKPDSAEINNNYGWFLCGRLNRPAESMAYFDKALADPTYPTPYIANLNKGICSAK-QGQFGLAE 133 (225)
T ss_dssp TTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHTTTCCHHHHHHHHHHHHTSTTCSCHHHHHHHHHHHHHH-TTCHHHHH
T ss_pred cCChHHHHHHHHHHHHhCCCChHHHHHHHHHHHHhcCcHHHHHHHHHHHHcCcCCcchHHHHHHHHHHHHH-cCCHHHHH
Confidence 44445555555555544444444444555555444 555555555555444 333334444445554444 45555555
Q ss_pred HHHHHHHhcCCCcHHHHHHHHHHHHhhcccc
Q psy12719 84 KLIEKAISIDKSCMFAYETLGTIEVQRTFVV 114 (116)
Q Consensus 84 ~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~ 114 (116)
..+.++++..|.++.++..++.++...|+++
T Consensus 134 ~~~~~~~~~~~~~~~~~~~la~~~~~~~~~~ 164 (225)
T 2vq2_A 134 AYLKRSLAAQPQFPPAFKELARTKMLAGQLG 164 (225)
T ss_dssp HHHHHHHHHSTTCHHHHHHHHHHHHHHTCHH
T ss_pred HHHHHHHHhCCCCchHHHHHHHHHHHcCCHH
Confidence 5555555555544444555555555544444
No 65
>2vsy_A XCC0866; transferase, glycosyl transferase, GT-B, OGT, protein O-GLCN; HET: NHE; 2.10A {Xanthomonas campestris PV} PDB: 2jlb_A* 2xgm_A* 2xgo_A* 2xgs_A* 2vsn_A*
Probab=99.82 E-value=1.8e-19 Score=113.45 Aligned_cols=109 Identities=14% Similarity=0.048 Sum_probs=87.3
Q ss_pred hhcHHHHHHHHHHHHhhCCChhHHHHHHHHHHHhhcChhhHHHHHHHHhccCCCCHHHHHHHHHHHHHhcCCHHHHHHHH
Q psy12719 7 RERVEQSLKEFRNFVDTHSNVVEACTLFAQVLVDQEDFDGAEEYFNRSIRVDPENASLYVHRAMLMLQARGNVDEAIKLI 86 (116)
Q Consensus 7 ~~~~~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~ 86 (116)
.|++++|+..++++++.+|++..++..+|.++...|++++|+..|+++++.+|++..++..+|.++.. .|++++|++.+
T Consensus 2 ~g~~~~A~~~~~~al~~~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~lg~~~~~-~g~~~~A~~~~ 80 (568)
T 2vsy_A 2 TADGPRELLQLRAAVRHRPQDFVAWLMLADAELGMGDTTAGEMAVQRGLALHPGHPEAVARLGRVRWT-QQRHAEAAVLL 80 (568)
T ss_dssp -------------------CCHHHHHHHHHHHHHHTCHHHHHHHHHHHHTTSTTCHHHHHHHHHHHHH-TTCHHHHHHHH
T ss_pred CccHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHH-CCCHHHHHHHH
Confidence 47899999999999999999999999999999999999999999999999999999999999999888 89999999999
Q ss_pred HHHHhcCCCcHHHHHHHHHHHHhhcccccC
Q psy12719 87 EKAISIDKSCMFAYETLGTIEVQRTFVVLW 116 (116)
Q Consensus 87 ~~~~~~~~~~~~~~~~l~~~~~~~~~~~~a 116 (116)
+++++.+|+++.++..+|.++...|++++|
T Consensus 81 ~~al~~~p~~~~~~~~la~~~~~~g~~~~A 110 (568)
T 2vsy_A 81 QQASDAAPEHPGIALWLGHALEDAGQAEAA 110 (568)
T ss_dssp HHHHHHCTTCHHHHHHHHHHHHHTTCHHHH
T ss_pred HHHHhcCCCCHHHHHHHHHHHHHcCCHHHH
Confidence 999999999999999999999999998764
No 66
>2vq2_A PILW, putative fimbrial biogenesis and twitching motility protein; secretin, TPR repeat, type IV pilus, bacterail virulence; 1.54A {Neisseria meningitidis}
Probab=99.82 E-value=5.7e-19 Score=98.97 Aligned_cols=112 Identities=14% Similarity=0.141 Sum_probs=96.5
Q ss_pred ccchhcHHHHHHHHHHHHhhCCChhHHHHHHHHHHHhhcChhhHHHHHHHHhccCCCCHHHHHHHHHHHHHhc-CCHHHH
Q psy12719 4 PGDRERVEQSLKEFRNFVDTHSNVVEACTLFAQVLVDQEDFDGAEEYFNRSIRVDPENASLYVHRAMLMLQAR-GNVDEA 82 (116)
Q Consensus 4 ~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~~~~-~~~~~a 82 (116)
+...|++++|+..+++++..+|+++.++..+|.++...|++++|+..+++++..+|.+..++..+|.++.. . |++++|
T Consensus 18 ~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~l~~~~~~-~~~~~~~A 96 (225)
T 2vq2_A 18 YMRGQDYRQATASIEDALKSDPKNELAWLVRAEIYQYLKVNDKAQESFRQALSIKPDSAEINNNYGWFLCG-RLNRPAES 96 (225)
T ss_dssp HHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHT-TTCCHHHH
T ss_pred HHHHhhHHHHHHHHHHHHHhCccchHHHHHHHHHHHHcCChHHHHHHHHHHHHhCCCChHHHHHHHHHHHH-hcCcHHHH
Confidence 45678889999999999999888888888899999999999999999999999888888888889988776 8 899999
Q ss_pred HHHHHHHHh--cCCCcHHHHHHHHHHHHhhcccccC
Q psy12719 83 IKLIEKAIS--IDKSCMFAYETLGTIEVQRTFVVLW 116 (116)
Q Consensus 83 ~~~~~~~~~--~~~~~~~~~~~l~~~~~~~~~~~~a 116 (116)
+..+++++. ..|....++..+|.++...|++++|
T Consensus 97 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~A 132 (225)
T 2vq2_A 97 MAYFDKALADPTYPTPYIANLNKGICSAKQGQFGLA 132 (225)
T ss_dssp HHHHHHHHTSTTCSCHHHHHHHHHHHHHHTTCHHHH
T ss_pred HHHHHHHHcCcCCcchHHHHHHHHHHHHHcCCHHHH
Confidence 999999988 6677788888899998888887754
No 67
>2ho1_A Type 4 fimbrial biogenesis protein PILF; type IV pilus biogenesis, TPR, superhelix, protein binding; HET: MSE; 2.00A {Pseudomonas aeruginosa} PDB: 2fi7_A
Probab=99.82 E-value=5.7e-19 Score=100.83 Aligned_cols=110 Identities=13% Similarity=0.181 Sum_probs=65.2
Q ss_pred cchhcHHHHHHHHHHHHhhCCChhHHHHHHHHHHHhhcChhhHHHHHHHHhc--cCCCCHHHHHHHHHHHHHhcCCHHHH
Q psy12719 5 GDRERVEQSLKEFRNFVDTHSNVVEACTLFAQVLVDQEDFDGAEEYFNRSIR--VDPENASLYVHRAMLMLQARGNVDEA 82 (116)
Q Consensus 5 ~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~a~~--~~~~~~~~~~~~~~~~~~~~~~~~~a 82 (116)
...|++++|++.+++++..+|.+..++..+|.++...|++++|+..+++++. ..|.+..++..+|.++.. .|++++|
T Consensus 82 ~~~~~~~~A~~~~~~a~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~~~~~~~~~~~~~~~~~la~~~~~-~g~~~~A 160 (252)
T 2ho1_A 82 QTEMEPKLADEEYRKALASDSRNARVLNNYGGFLYEQKRYEEAYQRLLEASQDTLYPERSRVFENLGLVSLQ-MKKPAQA 160 (252)
T ss_dssp HHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHTTCTTCTTHHHHHHHHHHHHHH-TTCHHHH
T ss_pred HHcCCHHHHHHHHHHHHHHCcCcHHHHHHHHHHHHHHhHHHHHHHHHHHHHhCccCcccHHHHHHHHHHHHH-cCCHHHH
Confidence 3445566666666666666665555666666666666666666666666655 555555556666665555 5666666
Q ss_pred HHHHHHHHhcCCCcHHHHHHHHHHHHhhccccc
Q psy12719 83 IKLIEKAISIDKSCMFAYETLGTIEVQRTFVVL 115 (116)
Q Consensus 83 ~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~ 115 (116)
+..+.+++...|.++.++..++.++...|++++
T Consensus 161 ~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~ 193 (252)
T 2ho1_A 161 KEYFEKSLRLNRNQPSVALEMADLLYKEREYVP 193 (252)
T ss_dssp HHHHHHHHHHCSCCHHHHHHHHHHHHHTTCHHH
T ss_pred HHHHHHHHhcCcccHHHHHHHHHHHHHcCCHHH
Confidence 666666666666555556666666665555543
No 68
>2pzi_A Probable serine/threonine-protein kinase PKNG; ATP-recognition, kinase-INH complex, rubredoxin fold, TPR domain, transferase; HET: AXX; 2.40A {Mycobacterium tuberculosis}
Probab=99.81 E-value=4.4e-19 Score=113.90 Aligned_cols=110 Identities=17% Similarity=0.029 Sum_probs=104.6
Q ss_pred cchhcHHHHHHHHHHHH--------hhCCChhHHHHHHHHHHHhhcChhhHHHHHHHHhccCCCCHHHHHHHHHHHHHhc
Q psy12719 5 GDRERVEQSLKEFRNFV--------DTHSNVVEACTLFAQVLVDQEDFDGAEEYFNRSIRVDPENASLYVHRAMLMLQAR 76 (116)
Q Consensus 5 ~~~~~~~~A~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~~~~ 76 (116)
...|++++|++.+++++ ..+|++..++..+|.++...|++++|+..|+++++.+|+++.+++.+|.++.. .
T Consensus 402 ~~~~~~~~A~~~~~~al~~~~~~~~~~~p~~~~~~~~~a~~~~~~g~~~~A~~~~~~al~~~p~~~~a~~~lg~~~~~-~ 480 (681)
T 2pzi_A 402 TVLSQPVQTLDSLRAARHGALDADGVDFSESVELPLMEVRALLDLGDVAKATRKLDDLAERVGWRWRLVWYRAVAELL-T 480 (681)
T ss_dssp TTTCCHHHHHHHHHHHHTC-------CCTTCSHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHH-H
T ss_pred ccccCHHHHHHHHHHhhhhcccccccccccchhHHHHHHHHHHhcCCHHHHHHHHHHHhccCcchHHHHHHHHHHHHH-c
Confidence 45789999999999999 89999999999999999999999999999999999999999999999999888 8
Q ss_pred CCHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHhhccccc
Q psy12719 77 GNVDEAIKLIEKAISIDKSCMFAYETLGTIEVQRTFVVL 115 (116)
Q Consensus 77 ~~~~~a~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~ 115 (116)
|++++|+..|+++++.+|+++.++.++|.++..+|++++
T Consensus 481 g~~~~A~~~~~~al~l~P~~~~~~~~lg~~~~~~g~~~~ 519 (681)
T 2pzi_A 481 GDYDSATKHFTEVLDTFPGELAPKLALAATAELAGNTDE 519 (681)
T ss_dssp TCHHHHHHHHHHHHHHSTTCSHHHHHHHHHHHHHTCCCT
T ss_pred CCHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHcCChHH
Confidence 999999999999999999999999999999999999864
No 69
>3cv0_A Peroxisome targeting signal 1 receptor PEX5; TPR motifs, TPR protein, peroxin 5, PEX5, PTS1 binding domain, protein-peptide complex, receptor; 2.00A {Trypanosoma brucei} PDB: 3cvl_A 3cvn_A 3cvp_A 3cvq_A
Probab=99.81 E-value=5.1e-19 Score=103.93 Aligned_cols=112 Identities=13% Similarity=0.117 Sum_probs=106.6
Q ss_pred ccchhcHHHHHHHHHHHHhhCCChhHHHHHHHHHHHhhcChhhHHHHHHHHhccCCCCHHHHHHHHHHHHHhcCCHHHHH
Q psy12719 4 PGDRERVEQSLKEFRNFVDTHSNVVEACTLFAQVLVDQEDFDGAEEYFNRSIRVDPENASLYVHRAMLMLQARGNVDEAI 83 (116)
Q Consensus 4 ~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~a~ 83 (116)
+...|++++|+..+++++..+|+++.++..+|.++...|++++|+..+++++...|.++.++..+|.++.. .|++++|.
T Consensus 182 ~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~l~~~~~~-~g~~~~A~ 260 (327)
T 3cv0_A 182 YNLSNNYDSAAANLRRAVELRPDDAQLWNKLGATLANGNRPQEALDAYNRALDINPGYVRVMYNMAVSYSN-MSQYDLAA 260 (327)
T ss_dssp HHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHH-TTCHHHHH
T ss_pred HHHhccHHHHHHHHHHHHHhCCCcHHHHHHHHHHHHHcCCHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHH-hccHHHHH
Confidence 45689999999999999999999999999999999999999999999999999999999999999999888 89999999
Q ss_pred HHHHHHHhcCCC------------cHHHHHHHHHHHHhhcccccC
Q psy12719 84 KLIEKAISIDKS------------CMFAYETLGTIEVQRTFVVLW 116 (116)
Q Consensus 84 ~~~~~~~~~~~~------------~~~~~~~l~~~~~~~~~~~~a 116 (116)
+.+++++...|+ .+.++..++.++...|++++|
T Consensus 261 ~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A 305 (327)
T 3cv0_A 261 KQLVRAIYMQVGGTTPTGEASREATRSMWDFFRMLLNVMNRPDLV 305 (327)
T ss_dssp HHHHHHHHHHTTSCC-----CCTHHHHHHHHHHHHHHHTTCHHHH
T ss_pred HHHHHHHHhCCccccccccchhhcCHHHHHHHHHHHHhcCCHHHH
Confidence 999999999999 899999999999999998764
No 70
>3u4t_A TPR repeat-containing protein; structural genomics, PSI- protein structure initiative, northeast structural genomics consortium, NESG; 2.28A {Cytophaga hutchinsonii}
Probab=99.81 E-value=1.2e-18 Score=100.39 Aligned_cols=107 Identities=9% Similarity=0.154 Sum_probs=95.9
Q ss_pred ccchhcHHHHHHHHHHHHhhCCChhHHHHHHHHHHHhhcChhhHHHHHHHHhccCCCCHHHHHHHH-HHHHHhcCCHHHH
Q psy12719 4 PGDRERVEQSLKEFRNFVDTHSNVVEACTLFAQVLVDQEDFDGAEEYFNRSIRVDPENASLYVHRA-MLMLQARGNVDEA 82 (116)
Q Consensus 4 ~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~~~-~~~~~~~~~~~~a 82 (116)
+...|++++|++.++++++.+|.++.++..+|.++...|++++|+..+++++..+|.++.+++.+| .+ +. .+++++|
T Consensus 84 ~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~l~~~~-~~-~~~~~~A 161 (272)
T 3u4t_A 84 LMKKGQDSLAIQQYQAAVDRDTTRLDMYGQIGSYFYNKGNFPLAIQYMEKQIRPTTTDPKVFYELGQAY-YY-NKEYVKA 161 (272)
T ss_dssp HHHTTCHHHHHHHHHHHHHHSTTCTHHHHHHHHHHHHTTCHHHHHHHHGGGCCSSCCCHHHHHHHHHHH-HH-TTCHHHH
T ss_pred HHHcccHHHHHHHHHHHHhcCcccHHHHHHHHHHHHHccCHHHHHHHHHHHhhcCCCcHHHHHHHHHHH-HH-HHHHHHH
Confidence 456788999999999999999999999999999999999999999999999999999999999999 55 55 5799999
Q ss_pred HHHHHHHHhcCCCcHHHHHHHHHHHHhhcc
Q psy12719 83 IKLIEKAISIDKSCMFAYETLGTIEVQRTF 112 (116)
Q Consensus 83 ~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~ 112 (116)
++.++++++.+|+++.++..+|.++...|+
T Consensus 162 ~~~~~~a~~~~p~~~~~~~~~~~~~~~~~~ 191 (272)
T 3u4t_A 162 DSSFVKVLELKPNIYIGYLWRARANAAQDP 191 (272)
T ss_dssp HHHHHHHHHHSTTCHHHHHHHHHHHHHHST
T ss_pred HHHHHHHHHhCccchHHHHHHHHHHHHcCc
Confidence 999999999999999999999999988887
No 71
>1elr_A TPR2A-domain of HOP; HOP, TPR-domain, peptide-complex, helical repeat, protein binding, chaperone; 1.90A {Homo sapiens} SCOP: a.118.8.1 PDB: 3esk_A 3fwv_A
Probab=99.81 E-value=8.4e-19 Score=90.89 Aligned_cols=109 Identities=16% Similarity=0.187 Sum_probs=99.6
Q ss_pred ccchhcHHHHHHHHHHHHhhCCChhHHHHHHHHHHHhhcChhhHHHHHHHHhccCCCC-------HHHHHHHHHHHHHhc
Q psy12719 4 PGDRERVEQSLKEFRNFVDTHSNVVEACTLFAQVLVDQEDFDGAEEYFNRSIRVDPEN-------ASLYVHRAMLMLQAR 76 (116)
Q Consensus 4 ~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~a~~~~~~~-------~~~~~~~~~~~~~~~ 76 (116)
+...|++++|+..+++++..+|.++.++..+|.++...|++++|+.++++++...|.+ +.+++.+|.++.. .
T Consensus 14 ~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~la~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~~~-~ 92 (131)
T 1elr_A 14 AYKKKDFDTALKHYDKAKELDPTNMTYITNQAAVYFEKGDYNKCRELCEKAIEVGRENREDYRQIAKAYARIGNSYFK-E 92 (131)
T ss_dssp HHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHSTTCHHHHHHHHHHHHHHHHH-T
T ss_pred HHHhcCHHHHHHHHHHHHhcCCccHHHHHHHHHHHHHhccHHHHHHHHHHHHhhccccchhHHHHHHHHHHHHHHHHH-h
Confidence 4567999999999999999999999999999999999999999999999999998877 8899999999888 8
Q ss_pred CCHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHhhcccc
Q psy12719 77 GNVDEAIKLIEKAISIDKSCMFAYETLGTIEVQRTFVV 114 (116)
Q Consensus 77 ~~~~~a~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~ 114 (116)
|++++|.+.+++++...| ++..+..++.+....++.+
T Consensus 93 ~~~~~A~~~~~~~~~~~~-~~~~~~~l~~~~~~~~~~~ 129 (131)
T 1elr_A 93 EKYKDAIHFYNKSLAEHR-TPDVLKKCQQAEKILKEQE 129 (131)
T ss_dssp TCHHHHHHHHHHHHHHCC-CHHHHHHHHHHHHHHHHC-
T ss_pred ccHHHHHHHHHHHHHhCC-CHHHHHHHHHHHHHHHHhh
Confidence 999999999999999998 5788889998887776544
No 72
>3hym_B Cell division cycle protein 16 homolog; APC, anaphase promoting complex, cell cycle, mitosis, cyclosome, TPR, ubiquitin, ubiquitin ligase, twinning; 2.80A {Homo sapiens}
Probab=99.81 E-value=7.1e-19 Score=103.44 Aligned_cols=106 Identities=11% Similarity=0.064 Sum_probs=66.2
Q ss_pred cHHHHHHHHHHHHhhCCChhHHHHHHHHHHHhhcChhhHHHHHHHHhccCCCCHHHHHHHHHHHHHhcCCHHHHHHHHHH
Q psy12719 9 RVEQSLKEFRNFVDTHSNVVEACTLFAQVLVDQEDFDGAEEYFNRSIRVDPENASLYVHRAMLMLQARGNVDEAIKLIEK 88 (116)
Q Consensus 9 ~~~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~ 88 (116)
++++|+..+++++..+|.++.++..+|.++...|++++|+..+++++...|.+..++..+|.++.. .|++++|+..+++
T Consensus 106 ~~~~A~~~~~~a~~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~l~~~~~~-~~~~~~A~~~~~~ 184 (330)
T 3hym_B 106 KNEHARRYLSKATTLEKTYGPAWIAYGHSFAVESEHDQAMAAYFTAAQLMKGCHLPMLYIGLEYGL-TNNSKLAERFFSQ 184 (330)
T ss_dssp CHHHHHHHHHHHHTTCTTCTHHHHHHHHHHHHHTCHHHHHHHHHHHHHHTTTCSHHHHHHHHHHHH-TTCHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHhCCccHHHHHHHHHHHHHccCHHHHHHHHHHHHHhccccHHHHHHHHHHHHH-HhhHHHHHHHHHH
Confidence 556666666666666666666666666666666666666666666666666666666666666555 5666666666666
Q ss_pred HHhcCCCcHHHHHHHHHHHHhhccccc
Q psy12719 89 AISIDKSCMFAYETLGTIEVQRTFVVL 115 (116)
Q Consensus 89 ~~~~~~~~~~~~~~l~~~~~~~~~~~~ 115 (116)
++..+|+++.++..+|.++...|++++
T Consensus 185 al~~~~~~~~~~~~l~~~~~~~~~~~~ 211 (330)
T 3hym_B 185 ALSIAPEDPFVMHEVGVVAFQNGEWKT 211 (330)
T ss_dssp HHTTCTTCHHHHHHHHHHHHHTTCHHH
T ss_pred HHHhCCCChHHHHHHHHHHHHcccHHH
Confidence 666666666666666666666666554
No 73
>2ho1_A Type 4 fimbrial biogenesis protein PILF; type IV pilus biogenesis, TPR, superhelix, protein binding; HET: MSE; 2.00A {Pseudomonas aeruginosa} PDB: 2fi7_A
Probab=99.81 E-value=5.1e-19 Score=101.04 Aligned_cols=112 Identities=17% Similarity=0.186 Sum_probs=105.9
Q ss_pred ccchhcHHHHHHHHHHHHhhCCChhHHHHHHHHHHHhhcChhhHHHHHHHHhccCCCCHHHHHHHHHHHHHhcCCHHHHH
Q psy12719 4 PGDRERVEQSLKEFRNFVDTHSNVVEACTLFAQVLVDQEDFDGAEEYFNRSIRVDPENASLYVHRAMLMLQARGNVDEAI 83 (116)
Q Consensus 4 ~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~a~ 83 (116)
+...|++++|+..+++++..+|.+..++..+|.++...|++++|+..+++++..+|.+..++..+|.++.. .|++++|+
T Consensus 47 ~~~~~~~~~A~~~~~~al~~~~~~~~~~~~la~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~la~~~~~-~g~~~~A~ 125 (252)
T 2ho1_A 47 YLQRGNTEQAKVPLRKALEIDPSSADAHAALAVVFQTEMEPKLADEEYRKALASDSRNARVLNNYGGFLYE-QKRYEEAY 125 (252)
T ss_dssp HHHTTCTGGGHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHH-TTCHHHHH
T ss_pred HHHcCChHHHHHHHHHHHhcCCChHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHCcCcHHHHHHHHHHHHH-HhHHHHHH
Confidence 45678999999999999999999999999999999999999999999999999999999999999999888 89999999
Q ss_pred HHHHHHHh--cCCCcHHHHHHHHHHHHhhcccccC
Q psy12719 84 KLIEKAIS--IDKSCMFAYETLGTIEVQRTFVVLW 116 (116)
Q Consensus 84 ~~~~~~~~--~~~~~~~~~~~l~~~~~~~~~~~~a 116 (116)
+.+++++. ..|.++.++..+|.++...|++++|
T Consensus 126 ~~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A 160 (252)
T 2ho1_A 126 QRLLEASQDTLYPERSRVFENLGLVSLQMKKPAQA 160 (252)
T ss_dssp HHHHHHTTCTTCTTHHHHHHHHHHHHHHTTCHHHH
T ss_pred HHHHHHHhCccCcccHHHHHHHHHHHHHcCCHHHH
Confidence 99999999 8889999999999999999998764
No 74
>3qky_A Outer membrane assembly lipoprotein YFIO; membrane protein; 2.15A {Rhodothermus marinus}
Probab=99.80 E-value=3.3e-19 Score=102.68 Aligned_cols=113 Identities=12% Similarity=0.100 Sum_probs=101.2
Q ss_pred ccchhcHHHHHHHHHHHHhhCCCh---hHHHHHHHHHHHhhcChhhHHHHHHHHhccCCCC---HHHHHHHHHHHHHh--
Q psy12719 4 PGDRERVEQSLKEFRNFVDTHSNV---VEACTLFAQVLVDQEDFDGAEEYFNRSIRVDPEN---ASLYVHRAMLMLQA-- 75 (116)
Q Consensus 4 ~~~~~~~~~A~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~A~~~~~~a~~~~~~~---~~~~~~~~~~~~~~-- 75 (116)
+...|++++|+..|++++..+|++ +.+++.+|.++...|++++|+..|++++...|++ +.+++.+|.+++..
T Consensus 25 ~~~~g~~~~A~~~~~~~l~~~p~~~~~~~a~~~lg~~~~~~~~~~~A~~~~~~~l~~~p~~~~~~~a~~~lg~~~~~~~~ 104 (261)
T 3qky_A 25 FYNQGKYDRAIEYFKAVFTYGRTHEWAADAQFYLARAYYQNKEYLLAASEYERFIQIYQIDPRVPQAEYERAMCYYKLSP 104 (261)
T ss_dssp HHHTTCHHHHHHHHHHHGGGCSCSTTHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCTTHHHHHHHHHHHHHHHCC
T ss_pred HHHhCCHHHHHHHHHHHHHhCCCCcchHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHCCCCchhHHHHHHHHHHHHHhcc
Confidence 456899999999999999999998 8899999999999999999999999999998855 67899999996541
Q ss_pred -----cCCHHHHHHHHHHHHhcCCCcHHHH-----------------HHHHHHHHhhcccccC
Q psy12719 76 -----RGNVDEAIKLIEKAISIDKSCMFAY-----------------ETLGTIEVQRTFVVLW 116 (116)
Q Consensus 76 -----~~~~~~a~~~~~~~~~~~~~~~~~~-----------------~~l~~~~~~~~~~~~a 116 (116)
.|++++|+..+++++...|+++.+. ..+|.++...|++++|
T Consensus 105 ~~~~~~~~~~~A~~~~~~~l~~~p~~~~~~~a~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A 167 (261)
T 3qky_A 105 PYELDQTDTRKAIEAFQLFIDRYPNHELVDDATQKIRELRAKLARKQYEAARLYERRELYEAA 167 (261)
T ss_dssp CTTSCCHHHHHHHHHHHHHHHHCTTCTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCHHHH
T ss_pred cccccchhHHHHHHHHHHHHHHCcCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHccCHHHH
Confidence 6999999999999999999886655 7889999999998764
No 75
>4gcn_A Protein STI-1; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, tetratricopeptide repeat domain; HET: PGE; 1.85A {Caenorhabditis elegans}
Probab=99.80 E-value=1.6e-19 Score=94.18 Aligned_cols=90 Identities=20% Similarity=0.339 Sum_probs=81.3
Q ss_pred ChhHHHHHHHHHHHhhcChhhHHHHHHHHhccCCCCHHHHHHHHHHHHHhcCCHHHHHHHHHHHHhcCCCc-------HH
Q psy12719 26 NVVEACTLFAQVLVDQEDFDGAEEYFNRSIRVDPENASLYVHRAMLMLQARGNVDEAIKLIEKAISIDKSC-------MF 98 (116)
Q Consensus 26 ~~~~~~~~~~~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~-------~~ 98 (116)
+.+.++..+|..++..|++++|+.+|++++.++|+++.++.++|.+++. +|++++|++.+.++++++|++ ..
T Consensus 6 d~A~a~~~lG~~~~~~~~~~~A~~~y~~Al~~~p~~~~~~~nlg~~~~~-~~~~~~A~~~~~~al~~~~~~~~~~~~~a~ 84 (127)
T 4gcn_A 6 DAAIAEKDLGNAAYKQKDFEKAHVHYDKAIELDPSNITFYNNKAAVYFE-EKKFAECVQFCEKAVEVGRETRADYKLIAK 84 (127)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHH-TTCHHHHHHHHHHHHHHHHHTTCCHHHHHH
T ss_pred HHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHhHHHHHHH-hhhHHHHHHHHHHHHHhCcccchhhHHHHH
Confidence 3466788999999999999999999999999999999999999999888 999999999999999998765 35
Q ss_pred HHHHHHHHHHhhcccccC
Q psy12719 99 AYETLGTIEVQRTFVVLW 116 (116)
Q Consensus 99 ~~~~l~~~~~~~~~~~~a 116 (116)
++..+|.++..+|++++|
T Consensus 85 ~~~~lg~~~~~~~~~~~A 102 (127)
T 4gcn_A 85 AMSRAGNAFQKQNDLSLA 102 (127)
T ss_dssp HHHHHHHHHHHTTCHHHH
T ss_pred HHHHHHHHHHHcCCHHHH
Confidence 788899999999988764
No 76
>3mkr_A Coatomer subunit epsilon; tetratricopeptide repeats (TPR), beta-hairpin, alpha-solenoi transport protein; 2.60A {Bos taurus}
Probab=99.80 E-value=1.3e-18 Score=101.94 Aligned_cols=112 Identities=13% Similarity=0.080 Sum_probs=95.2
Q ss_pred cccchhcHHHHHHHHHHHHhhCCChhHHHHHHH--HHHHhhcChhhHHHHHHHHhccCCCCHHHHHHHHHHHHHhcCCHH
Q psy12719 3 VPGDRERVEQSLKEFRNFVDTHSNVVEACTLFA--QVLVDQEDFDGAEEYFNRSIRVDPENASLYVHRAMLMLQARGNVD 80 (116)
Q Consensus 3 ~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (116)
++..+|++++|+..++++++.+|++.......+ .++...|++++|+..|++++...|.++.+++.+|.++.. .|+++
T Consensus 139 ~~~~~g~~~~A~~~l~~~~~~~p~~~~~~l~~a~~~l~~~~~~~~eA~~~~~~~l~~~p~~~~~~~~la~~~~~-~g~~~ 217 (291)
T 3mkr_A 139 ILLKLDRLDLARKELKKMQDQDEDATLTQLATAWVSLAAGGEKLQDAYYIFQEMADKCSPTLLLLNGQAACHMA-QGRWE 217 (291)
T ss_dssp HHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHCTTHHHHHHHHHHHHHHHSCCCHHHHHHHHHHHHH-TTCHH
T ss_pred HHHHCCCHHHHHHHHHHHHhhCcCcHHHHHHHHHHHHHhCchHHHHHHHHHHHHHHhCCCcHHHHHHHHHHHHH-cCCHH
Confidence 345678999999999999999988765444333 334456899999999999999999999999999999887 89999
Q ss_pred HHHHHHHHHHhcCCCcHHHHHHHHHHHHhhccccc
Q psy12719 81 EAIKLIEKAISIDKSCMFAYETLGTIEVQRTFVVL 115 (116)
Q Consensus 81 ~a~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~ 115 (116)
+|+..+++++..+|+++.++.+++.++...|+.++
T Consensus 218 eA~~~l~~al~~~p~~~~~l~~l~~~~~~~g~~~e 252 (291)
T 3mkr_A 218 AAEGVLQEALDKDSGHPETLINLVVLSQHLGKPPE 252 (291)
T ss_dssp HHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCCHH
T ss_pred HHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCCHH
Confidence 99999999999999999999999999999888753
No 77
>3uq3_A Heat shock protein STI1; HSP90, peptide binding, chaperone; 2.60A {Saccharomyces cerevisiae}
Probab=99.80 E-value=3.7e-19 Score=101.52 Aligned_cols=113 Identities=12% Similarity=0.144 Sum_probs=104.2
Q ss_pred cccchhcHHHHHHHHHHHHhhCCCh-------hHHHHHHHHHHHhhcChhhHHHHHHHHhc-------------------
Q psy12719 3 VPGDRERVEQSLKEFRNFVDTHSNV-------VEACTLFAQVLVDQEDFDGAEEYFNRSIR------------------- 56 (116)
Q Consensus 3 ~~~~~~~~~~A~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~A~~~~~~a~~------------------- 56 (116)
++...|++++|+..+.+++...|.+ +.++..+|.++...|++++|+..+++++.
T Consensus 47 ~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~a~~ 126 (258)
T 3uq3_A 47 AEYEKGEYETAISTLNDAVEQGREMRADYKVISKSFARIGNAYHKLGDLKKTIEYYQKSLTEHRTADILTKLRNAEKELK 126 (258)
T ss_dssp HHHHTTCHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHH
T ss_pred HHHHcccHHHHHHHHHHHHHhCcccccchHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHhcCchhHHHHHHhHHHHHHH
Confidence 3556899999999999999998876 68999999999999999999999999999
Q ss_pred -------cCCCCHHHHHHHHHHHHHhcCCHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHhhcccccC
Q psy12719 57 -------VDPENASLYVHRAMLMLQARGNVDEAIKLIEKAISIDKSCMFAYETLGTIEVQRTFVVLW 116 (116)
Q Consensus 57 -------~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~a 116 (116)
.+|..+.++..+|.++.. .|++++|+..+++++..+|.++.++..+|.++...|++++|
T Consensus 127 ~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~A~~~~~~a~~~~~~~~~~~~~l~~~~~~~~~~~~A 192 (258)
T 3uq3_A 127 KAEAEAYVNPEKAEEARLEGKEYFT-KSDWPNAVKAYTEMIKRAPEDARGYSNRAAALAKLMSFPEA 192 (258)
T ss_dssp HHHHHHHCCHHHHHHHHHHHHHHHH-TTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHH
T ss_pred HHHHHHHcCcchHHHHHHHHHHHHH-hcCHHHHHHHHHHHHhcCcccHHHHHHHHHHHHHhCCHHHH
Confidence 677778899999999888 89999999999999999999999999999999999998764
No 78
>3qou_A Protein YBBN; thioredoxin-like fold, tetratricopeptide repeat, lysine dimethylation, protein binding; HET: MLY; 1.80A {Escherichia coli} PDB: 3qdn_A*
Probab=99.80 E-value=1.1e-18 Score=101.99 Aligned_cols=111 Identities=18% Similarity=0.143 Sum_probs=95.9
Q ss_pred ccchhcHHHHHHHHHHHHhhCCChhHHHHHHHHHHHhhcChhhHHHHHHHH-----------------------------
Q psy12719 4 PGDRERVEQSLKEFRNFVDTHSNVVEACTLFAQVLVDQEDFDGAEEYFNRS----------------------------- 54 (116)
Q Consensus 4 ~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~a----------------------------- 54 (116)
+...|++++|+..|++++..+|+++.++..+|.++...|++++|+..++++
T Consensus 127 ~~~~g~~~~A~~~~~~al~~~P~~~~a~~~la~~~~~~g~~~~A~~~l~~~~~~~p~~~~~~~~~~~~l~~~~~~~~a~~ 206 (287)
T 3qou_A 127 LMQESNYTDALPLLXDAWQLSNQNGEIGLLLAETLIALNRSEDAEAVLXTIPLQDQDTRYQGLVAQIELLXQAADTPEIQ 206 (287)
T ss_dssp HHHTTCHHHHHHHHHHHHHHTTSCHHHHHHHHHHHHHTTCHHHHHHHHTTSCGGGCSHHHHHHHHHHHHHHHHTSCHHHH
T ss_pred HHhCCCHHHHHHHHHHHHHhCCcchhHHHHHHHHHHHCCCHHHHHHHHHhCchhhcchHHHHHHHHHHHHhhcccCccHH
Confidence 346799999999999999999999999999999999999988887666554
Q ss_pred -----hccCCCCHHHHHHHHHHHHHhcCCHHHHHHHHHHHHhcCCCc--HHHHHHHHHHHHhhccccc
Q psy12719 55 -----IRVDPENASLYVHRAMLMLQARGNVDEAIKLIEKAISIDKSC--MFAYETLGTIEVQRTFVVL 115 (116)
Q Consensus 55 -----~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~--~~~~~~l~~~~~~~~~~~~ 115 (116)
+..+|+++.+++.+|.++.. .|++++|+..+.+++..+|++ ..++..++.++...|+.++
T Consensus 207 ~l~~al~~~P~~~~~~~~la~~l~~-~g~~~~A~~~l~~~l~~~p~~~~~~a~~~l~~~~~~~g~~~~ 273 (287)
T 3qou_A 207 QLQQQVAENPEDAALATQLALQLHQ-VGRNEEALELLFGHLRXDLTAADGQTRXTFQEILAALGTGDA 273 (287)
T ss_dssp HHHHHHHHCTTCHHHHHHHHHHHHH-TTCHHHHHHHHHHHHHHCTTGGGGHHHHHHHHHHHHHCTTCH
T ss_pred HHHHHHhcCCccHHHHHHHHHHHHH-cccHHHHHHHHHHHHhcccccccchHHHHHHHHHHHcCCCCc
Confidence 55578888888999998777 899999999999999999887 7888999999988888765
No 79
>3hym_B Cell division cycle protein 16 homolog; APC, anaphase promoting complex, cell cycle, mitosis, cyclosome, TPR, ubiquitin, ubiquitin ligase, twinning; 2.80A {Homo sapiens}
Probab=99.80 E-value=1.2e-18 Score=102.45 Aligned_cols=110 Identities=10% Similarity=0.068 Sum_probs=71.2
Q ss_pred cchhcHHHHHHHHHHHHhhCCChhHHHHHHHHHHHhhc-ChhhHHHHHHHHhccCCCCHHHHHHHHHHHHHhcCCHHHHH
Q psy12719 5 GDRERVEQSLKEFRNFVDTHSNVVEACTLFAQVLVDQE-DFDGAEEYFNRSIRVDPENASLYVHRAMLMLQARGNVDEAI 83 (116)
Q Consensus 5 ~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~a~ 83 (116)
...|++++|+..+++++..+|.++.++..+|.++...| ++++|+..+++++..+|.++.++..+|.++.. .|++++|+
T Consensus 67 ~~~~~~~~A~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~l~~~~~~-~~~~~~A~ 145 (330)
T 3hym_B 67 VELNKANELFYLSHKLVDLYPSNPVSWFAVGCYYLMVGHKNEHARRYLSKATTLEKTYGPAWIAYGHSFAV-ESEHDQAM 145 (330)
T ss_dssp HHHTCHHHHHHHHHHHHHHCTTSTHHHHHHHHHHHHSCSCHHHHHHHHHHHHTTCTTCTHHHHHHHHHHHH-HTCHHHHH
T ss_pred HHhhhHHHHHHHHHHHHHhCcCCHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHhCCccHHHHHHHHHHHHH-ccCHHHHH
Confidence 34556666666666666666666666666666666666 66666666666666666666666666666555 56666666
Q ss_pred HHHHHHHhcCCCcHHHHHHHHHHHHhhccccc
Q psy12719 84 KLIEKAISIDKSCMFAYETLGTIEVQRTFVVL 115 (116)
Q Consensus 84 ~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~ 115 (116)
..+++++...|++..++..+|.++...|++++
T Consensus 146 ~~~~~a~~~~~~~~~~~~~l~~~~~~~~~~~~ 177 (330)
T 3hym_B 146 AAYFTAAQLMKGCHLPMLYIGLEYGLTNNSKL 177 (330)
T ss_dssp HHHHHHHHHTTTCSHHHHHHHHHHHHTTCHHH
T ss_pred HHHHHHHHhccccHHHHHHHHHHHHHHhhHHH
Confidence 66666666666666666666666666666554
No 80
>4eqf_A PEX5-related protein; accessory protein, tetratricopeptide repeat, TPR; 3.00A {Mus musculus}
Probab=99.80 E-value=4.3e-19 Score=106.12 Aligned_cols=112 Identities=12% Similarity=0.121 Sum_probs=103.8
Q ss_pred cccchhcHHHHHHHHHHHHhhCCChhHHHHHHHHHHHhhcChhhHHHHHHHHhccCCCCHHHHHHHHHHHHHhcCCHHHH
Q psy12719 3 VPGDRERVEQSLKEFRNFVDTHSNVVEACTLFAQVLVDQEDFDGAEEYFNRSIRVDPENASLYVHRAMLMLQARGNVDEA 82 (116)
Q Consensus 3 ~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~a 82 (116)
++...|++++|+..++++++.+|+++.++..+|.++...|++++|+..|++++..+|+++.++..+|.++.. .|++++|
T Consensus 222 ~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~l~~~~~~-~g~~~~A 300 (365)
T 4eqf_A 222 LFHLSGEFNRAIDAFNAALTVRPEDYSLWNRLGATLANGDRSEEAVEAYTRALEIQPGFIRSRYNLGISCIN-LGAYREA 300 (365)
T ss_dssp HHHHHTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHH-HTCCHHH
T ss_pred HHHHCCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhcCCCchHHHHHHHHHHHH-CCCHHHH
Confidence 345679999999999999999999999999999999999999999999999999999999999999999888 8999999
Q ss_pred HHHHHHHHhcCCC------------cHHHHHHHHHHHHhhccccc
Q psy12719 83 IKLIEKAISIDKS------------CMFAYETLGTIEVQRTFVVL 115 (116)
Q Consensus 83 ~~~~~~~~~~~~~------------~~~~~~~l~~~~~~~~~~~~ 115 (116)
+..++++++..|+ ...+|..++.++..+|+.+.
T Consensus 301 ~~~~~~al~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~ 345 (365)
T 4eqf_A 301 VSNFLTALSLQRKSRNQQQVPHPAISGNIWAALRIALSLMDQPEL 345 (365)
T ss_dssp HHHHHHHHHHHHCC------------CHHHHHHHHHHHHHTCHHH
T ss_pred HHHHHHHHHhCcccCCCcccchhhhHHHHHHHHHHHHHHcCcHHH
Confidence 9999999999876 36789999999999988764
No 81
>1xnf_A Lipoprotein NLPI; TPR, tetratricopeptide, structural genomi unknown function; 1.98A {Escherichia coli} SCOP: a.118.8.1
Probab=99.80 E-value=2e-18 Score=99.44 Aligned_cols=110 Identities=15% Similarity=0.093 Sum_probs=98.4
Q ss_pred ccchhcHHHHHHHHHHHHhhCCChhHHHHHHHHHHHhhcChhhHHHHHHHHhccCCCCHHHHHHHHHHHHHhcCCHHHHH
Q psy12719 4 PGDRERVEQSLKEFRNFVDTHSNVVEACTLFAQVLVDQEDFDGAEEYFNRSIRVDPENASLYVHRAMLMLQARGNVDEAI 83 (116)
Q Consensus 4 ~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~a~ 83 (116)
+...|++++|+..|++++..+|.++.++..+|.++...|++++|+..|++++..+|.++.++..+|.++.. .|++++|+
T Consensus 53 ~~~~~~~~~A~~~~~~al~~~~~~~~~~~~la~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~la~~~~~-~g~~~~A~ 131 (275)
T 1xnf_A 53 YDSLGLRALARNDFSQALAIRPDMPEVFNYLGIYLTQAGNFDAAYEAFDSVLELDPTYNYAHLNRGIALYY-GGRDKLAQ 131 (275)
T ss_dssp HHHTTCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCTHHHHHHHHHHHH-TTCHHHHH
T ss_pred HHHcccHHHHHHHHHHHHHcCCCcHHHHHHHHHHHHHccCHHHHHHHHHHHHhcCccccHHHHHHHHHHHH-hccHHHHH
Confidence 45679999999999999999999999999999999999999999999999999999999999999999888 89999999
Q ss_pred HHHHHHHhcCCCcHHHHHHHHHHHHhhccccc
Q psy12719 84 KLIEKAISIDKSCMFAYETLGTIEVQRTFVVL 115 (116)
Q Consensus 84 ~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~ 115 (116)
..+++++..+|+++.....++.. ...|++++
T Consensus 132 ~~~~~a~~~~~~~~~~~~~~~~~-~~~~~~~~ 162 (275)
T 1xnf_A 132 DDLLAFYQDDPNDPFRSLWLYLA-EQKLDEKQ 162 (275)
T ss_dssp HHHHHHHHHCTTCHHHHHHHHHH-HHHHCHHH
T ss_pred HHHHHHHHhCCCChHHHHHHHHH-HHhcCHHH
Confidence 99999999999988655555443 44466544
No 82
>3sz7_A HSC70 cochaperone (SGT); TPR domain, GET4, GET5, GET3, MDY2, SSA1, SSE1, chaperone regulator; 1.72A {Aspergillus fumigatus}
Probab=99.80 E-value=1.5e-18 Score=93.85 Aligned_cols=92 Identities=14% Similarity=0.158 Sum_probs=87.4
Q ss_pred CCChhHHHHHHHHHHHhhcChhhHHHHHHHHhccCCCCHHHHHHHHHHHHHhcCCHHHHHHHHHHHHhcCCCcHHHHHHH
Q psy12719 24 HSNVVEACTLFAQVLVDQEDFDGAEEYFNRSIRVDPENASLYVHRAMLMLQARGNVDEAIKLIEKAISIDKSCMFAYETL 103 (116)
Q Consensus 24 ~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~l 103 (116)
.+.++..+..+|.++...|++++|+..|++++..+|.++.+++.+|.+++. .|++++|+..+++++..+|+++.++..+
T Consensus 7 ~~~~a~~~~~~g~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~l~~~~~~-~g~~~~A~~~~~~al~~~p~~~~~~~~l 85 (164)
T 3sz7_A 7 PTPESDKLKSEGNAAMARKEYSKAIDLYTQALSIAPANPIYLSNRAAAYSA-SGQHEKAAEDAELATVVDPKYSKAWSRL 85 (164)
T ss_dssp CCHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSTTCHHHHHHHHHHHHH-TTCHHHHHHHHHHHHHHCTTCHHHHHHH
T ss_pred hhhhHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCcCHHHHHHHHHHHHH-ccCHHHHHHHHHHHHHhCCCCHHHHHHH
Confidence 456688999999999999999999999999999999999999999999888 9999999999999999999999999999
Q ss_pred HHHHHhhcccccC
Q psy12719 104 GTIEVQRTFVVLW 116 (116)
Q Consensus 104 ~~~~~~~~~~~~a 116 (116)
|.++..+|++++|
T Consensus 86 g~~~~~~g~~~~A 98 (164)
T 3sz7_A 86 GLARFDMADYKGA 98 (164)
T ss_dssp HHHHHHTTCHHHH
T ss_pred HHHHHHccCHHHH
Confidence 9999999998764
No 83
>2r5s_A Uncharacterized protein VP0806; APC090868.1, vibrio parahaemolyticus RIMD 22 structural genomics, PSI-2, protein structure initiative; HET: MES; 2.14A {Vibrio parahaemolyticus}
Probab=99.80 E-value=1e-19 Score=99.53 Aligned_cols=111 Identities=17% Similarity=0.124 Sum_probs=84.3
Q ss_pred ccchhcHHHHHHHHHHHHhhCCChhHHHHHHHHHHHhhcChhhHHHHHHHHh----------------------------
Q psy12719 4 PGDRERVEQSLKEFRNFVDTHSNVVEACTLFAQVLVDQEDFDGAEEYFNRSI---------------------------- 55 (116)
Q Consensus 4 ~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~a~---------------------------- 55 (116)
+...|++++|+..|++++..+|+++.++..+|.++...|++++|+..+++++
T Consensus 16 ~~~~g~~~~A~~~~~~al~~~P~~~~a~~~la~~~~~~g~~~~A~~~~~~a~~~~p~~~~~~~~~~~~~~~~~~~~~a~~ 95 (176)
T 2r5s_A 16 LLQQGEHAQALNVIQTLSDELQSRGDVKLAKADCLLETKQFELAQELLATIPLEYQDNSYKSLIAKLELHQQAAESPELK 95 (176)
T ss_dssp HHHTTCHHHHHHHHHTSCHHHHTSHHHHHHHHHHHHHTTCHHHHHHHHTTCCGGGCCHHHHHHHHHHHHHHHHTSCHHHH
T ss_pred HHHcCCHHHHHHHHHHHHHHCCCcHHHHHHHHHHHHHCCCHHHHHHHHHHhhhccCChHHHHHHHHHHHHhhcccchHHH
Confidence 3456788888888888888888888888888888888888777766555543
Q ss_pred ------ccCCCCHHHHHHHHHHHHHhcCCHHHHHHHHHHHHhcCCCc--HHHHHHHHHHHHhhccccc
Q psy12719 56 ------RVDPENASLYVHRAMLMLQARGNVDEAIKLIEKAISIDKSC--MFAYETLGTIEVQRTFVVL 115 (116)
Q Consensus 56 ------~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~--~~~~~~l~~~~~~~~~~~~ 115 (116)
..+|+++.+++.+|.++.. .|++++|+..+++++..+|+. +.++..++.++...|+.++
T Consensus 96 ~~~~al~~~P~~~~~~~~la~~~~~-~g~~~~A~~~~~~~l~~~p~~~~~~a~~~l~~~~~~~g~~~~ 162 (176)
T 2r5s_A 96 RLEQELAANPDNFELACELAVQYNQ-VGRDEEALELLWNILKVNLGAQDGEVKKTFMDILSALGQGNA 162 (176)
T ss_dssp HHHHHHHHSTTCHHHHHHHHHHHHH-TTCHHHHHHHHHHHHTTCTTTTTTHHHHHHHHHHHHHCSSCH
T ss_pred HHHHHHHhCCCCHHHHHHHHHHHHH-cccHHHHHHHHHHHHHhCcccChHHHHHHHHHHHHHhCCCCc
Confidence 4456667777778887666 788888888888888888765 5578888888888887765
No 84
>3ieg_A DNAJ homolog subfamily C member 3; TPR motif, chaperone, endoplasmic reticulum, TPR repeat, UNF protein response; 2.51A {Mus musculus}
Probab=99.80 E-value=1.9e-18 Score=102.48 Aligned_cols=112 Identities=17% Similarity=0.117 Sum_probs=104.0
Q ss_pred ccchhcHHHHHHHHHHHHhhCCChhHHHHHHHHHHHhhcChhhHHHHHHHHhccCCCCHHHHHHHHHHHHHhcCCHHHHH
Q psy12719 4 PGDRERVEQSLKEFRNFVDTHSNVVEACTLFAQVLVDQEDFDGAEEYFNRSIRVDPENASLYVHRAMLMLQARGNVDEAI 83 (116)
Q Consensus 4 ~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~a~ 83 (116)
+...|++++|+..|++++..+|+++.++..+|.++...|++++|+..+++++..+|.++.++..+|.++.. .|++++|+
T Consensus 13 ~~~~g~~~~A~~~~~~~l~~~p~~~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~l~~~~~~-~~~~~~A~ 91 (359)
T 3ieg_A 13 LLAAGQLADALSQFHAAVDGDPDNYIAYYRRATVFLAMGKSKAALPDLTKVIALKMDFTAARLQRGHLLLK-QGKLDEAE 91 (359)
T ss_dssp HHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHH-HTCHHHHH
T ss_pred HHHcCCHHHHHHHHHHHHhhCcccHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCcchHHHHHHHHHHH-cCChHHHH
Confidence 45689999999999999999999999999999999999999999999999999999999999999999888 89999999
Q ss_pred HHHHHHHhcCC---CcHHHHHHH------------HHHHHhhcccccC
Q psy12719 84 KLIEKAISIDK---SCMFAYETL------------GTIEVQRTFVVLW 116 (116)
Q Consensus 84 ~~~~~~~~~~~---~~~~~~~~l------------~~~~~~~~~~~~a 116 (116)
..+++++..+| +++.++..+ +.++...|++++|
T Consensus 92 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~a~~~~~~~~~~~A 139 (359)
T 3ieg_A 92 DDFKKVLKSNPSEQEEKEAESQLVKADEMQRLRSQALDAFDGADYTAA 139 (359)
T ss_dssp HHHHHHHTSCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCHHHH
T ss_pred HHHHHHHhcCCcccChHHHHHHHHHHHHHHHHHHHHHHHHHccCHHHH
Confidence 99999999999 888888877 6788888877653
No 85
>3urz_A Uncharacterized protein; tetratricopeptide repeats (TPR) containing protein, structur genomics, joint center for structural genomics, JCSG; HET: PG4; 2.19A {Bacteroides ovatus}
Probab=99.79 E-value=3.1e-18 Score=95.94 Aligned_cols=105 Identities=13% Similarity=0.140 Sum_probs=87.9
Q ss_pred cccchhcHHHHHHHHHHHHhhCCChhHHHHHHHHHHHhhcChhhHHHHHHHHhccCCCCHHHHHHHHHHHHHh-------
Q psy12719 3 VPGDRERVEQSLKEFRNFVDTHSNVVEACTLFAQVLVDQEDFDGAEEYFNRSIRVDPENASLYVHRAMLMLQA------- 75 (116)
Q Consensus 3 ~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~~~------- 75 (116)
++...|++++|+..|+++++.+|+++.++..+|.++...|++++|+..|++++.++|+++.+++.+|.+++..
T Consensus 63 ~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~P~~~~a~~~lg~~~~~~~~~~~~~ 142 (208)
T 3urz_A 63 AYKKNRNYDKAYLFYKELLQKAPNNVDCLEACAEMQVCRGQEKDALRMYEKILQLEADNLAANIFLGNYYYLTAEQEKKK 142 (208)
T ss_dssp HHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHhHHHHHH
Confidence 3567899999999999999999999999999999999999999999999999999999999999888876431
Q ss_pred ---------------------------cCCHHHHHHHHHHHHhcCCCcHHHHHHHHHHHH
Q psy12719 76 ---------------------------RGNVDEAIKLIEKAISIDKSCMFAYETLGTIEV 108 (116)
Q Consensus 76 ---------------------------~~~~~~a~~~~~~~~~~~~~~~~~~~~l~~~~~ 108 (116)
.|++++|+..++++++.+|+.. +...+..+..
T Consensus 143 ~~~~~~~~~~~~~~~~a~~~~g~~~~~~~~~~~A~~~~~~al~l~P~~~-~~~~l~~i~~ 201 (208)
T 3urz_A 143 LETDYKKLSSPTKMQYARYRDGLSKLFTTRYEKARNSLQKVILRFPSTE-AQKTLDKILR 201 (208)
T ss_dssp HHHHHC---CCCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHTTTSCCHH-HHHHHHHHHH
T ss_pred HHHHHHHHhCCCchhHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCHH-HHHHHHHHHH
Confidence 2457788888888888888753 4445555443
No 86
>3qky_A Outer membrane assembly lipoprotein YFIO; membrane protein; 2.15A {Rhodothermus marinus}
Probab=99.79 E-value=1.2e-18 Score=100.35 Aligned_cols=107 Identities=16% Similarity=-0.010 Sum_probs=97.0
Q ss_pred cccchhcHHHHHHHHHHHHhhCCCh---hHHHHHHHHHHHh--------hcChhhHHHHHHHHhccCCCCHHHH------
Q psy12719 3 VPGDRERVEQSLKEFRNFVDTHSNV---VEACTLFAQVLVD--------QEDFDGAEEYFNRSIRVDPENASLY------ 65 (116)
Q Consensus 3 ~~~~~~~~~~A~~~~~~~~~~~~~~---~~~~~~~~~~~~~--------~~~~~~A~~~~~~a~~~~~~~~~~~------ 65 (116)
++...|++++|+..|++++...|++ +.+++.+|.++.. .|++++|+..|++++...|++..+.
T Consensus 61 ~~~~~~~~~~A~~~~~~~l~~~p~~~~~~~a~~~lg~~~~~~~~~~~~~~~~~~~A~~~~~~~l~~~p~~~~~~~a~~~~ 140 (261)
T 3qky_A 61 AYYQNKEYLLAASEYERFIQIYQIDPRVPQAEYERAMCYYKLSPPYELDQTDTRKAIEAFQLFIDRYPNHELVDDATQKI 140 (261)
T ss_dssp HHHHTTCHHHHHHHHHHHHHHCTTCTTHHHHHHHHHHHHHHHCCCTTSCCHHHHHHHHHHHHHHHHCTTCTTHHHHHHHH
T ss_pred HHHHhCcHHHHHHHHHHHHHHCCCCchhHHHHHHHHHHHHHhcccccccchhHHHHHHHHHHHHHHCcCchhHHHHHHHH
Confidence 4567899999999999999998854 6789999999999 9999999999999999999986655
Q ss_pred -----------HHHHHHHHHhcCCHHHHHHHHHHHHhcCCC---cHHHHHHHHHHHHhh
Q psy12719 66 -----------VHRAMLMLQARGNVDEAIKLIEKAISIDKS---CMFAYETLGTIEVQR 110 (116)
Q Consensus 66 -----------~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~---~~~~~~~l~~~~~~~ 110 (116)
+.+|.++.. .|++++|+..+++++...|+ .+.++..+|.++..+
T Consensus 141 ~~~~~~~~~~~~~la~~~~~-~g~~~~A~~~~~~~l~~~p~~~~~~~a~~~l~~~~~~~ 198 (261)
T 3qky_A 141 RELRAKLARKQYEAARLYER-RELYEAAAVTYEAVFDAYPDTPWADDALVGAMRAYIAY 198 (261)
T ss_dssp HHHHHHHHHHHHHHHHHHHH-TTCHHHHHHHHHHHHHHCTTSTTHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHH-ccCHHHHHHHHHHHHHHCCCCchHHHHHHHHHHHHHHh
Confidence 888999888 89999999999999999998 577999999999977
No 87
>3q49_B STIP1 homology and U box-containing protein 1; E3 ubiquitin ligase, ligase-chaperone complex; 1.54A {Mus musculus} PDB: 3q47_B 3q4a_B*
Probab=99.79 E-value=3.2e-18 Score=89.78 Aligned_cols=94 Identities=18% Similarity=0.183 Sum_probs=87.3
Q ss_pred hhCCChhHHHHHHHHHHHhhcChhhHHHHHHHHhccCCCCHHHHHHHHHHHHHhcCCHHHHHHHHHHHHhcCCCcHHHHH
Q psy12719 22 DTHSNVVEACTLFAQVLVDQEDFDGAEEYFNRSIRVDPENASLYVHRAMLMLQARGNVDEAIKLIEKAISIDKSCMFAYE 101 (116)
Q Consensus 22 ~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~ 101 (116)
..+|.++..+..+|..+...|++++|+..|++++..+|.++.+++.+|.++.. .|++++|+..+++++..+|+++.++.
T Consensus 3 ~~~~~~~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~l~~~~~~-~~~~~~A~~~~~~al~~~p~~~~~~~ 81 (137)
T 3q49_B 3 HMKSPSAQELKEQGNRLFVGRKYPEAAACYGRAITRNPLVAVYYTNRALCYLK-MQQPEQALADCRRALELDGQSVKAHF 81 (137)
T ss_dssp ---CCCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHH-TTCHHHHHHHHHHHHHHCTTCHHHHH
T ss_pred CCccccHHHHHHHHHHHHHhCcHHHHHHHHHHHHhhCcCcHHHHHHHHHHHHH-hcCHHHHHHHHHHHHHhCchhHHHHH
Confidence 34577889999999999999999999999999999999999999999999888 99999999999999999999999999
Q ss_pred HHHHHHHhhcccccC
Q psy12719 102 TLGTIEVQRTFVVLW 116 (116)
Q Consensus 102 ~l~~~~~~~~~~~~a 116 (116)
.+|.++...|++++|
T Consensus 82 ~l~~~~~~~~~~~~A 96 (137)
T 3q49_B 82 FLGQCQLEMESYDEA 96 (137)
T ss_dssp HHHHHHHHTTCHHHH
T ss_pred HHHHHHHHHhhHHHH
Confidence 999999999998764
No 88
>3fp2_A TPR repeat-containing protein YHR117W; TOM71, mitochondria translocation, allosteric REG phosphoprotein, TPR repeat, ATP-binding; 1.98A {Saccharomyces cerevisiae} PDB: 3fp3_A 3fp4_A 3lca_A
Probab=99.79 E-value=2.3e-18 Score=107.03 Aligned_cols=113 Identities=19% Similarity=0.196 Sum_probs=96.9
Q ss_pred cccchhcHHHHHHHHHHHHhhCCChhHHHHHHHHHHHhhcChhhHHHHHHHHhccCCCCHHHHHHHHHHHHHhcCCHHHH
Q psy12719 3 VPGDRERVEQSLKEFRNFVDTHSNVVEACTLFAQVLVDQEDFDGAEEYFNRSIRVDPENASLYVHRAMLMLQARGNVDEA 82 (116)
Q Consensus 3 ~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~a 82 (116)
.+...|++++|+..+++++..+|+++.++..+|.++...|++++|+..+++++..+|.++.++..+|.++.. .|++++|
T Consensus 285 ~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~la~~~~~-~g~~~~A 363 (537)
T 3fp2_A 285 TLADKENSQEFFKFFQKAVDLNPEYPPTYYHRGQMYFILQDYKNAKEDFQKAQSLNPENVYPYIQLACLLYK-QGKFTES 363 (537)
T ss_dssp HTCCSSCCHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCSHHHHHHHHHHHH-TTCHHHH
T ss_pred HHHHhcCHHHHHHHHHHHhccCCCCHHHHHHHHHHHHhcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHH-cCCHHHH
Confidence 356678888888888888888888888888888888888888888888888888888888888888888777 8888888
Q ss_pred HHHHHHHHhcCCCcHHHHHHHHHHHHhhcccccC
Q psy12719 83 IKLIEKAISIDKSCMFAYETLGTIEVQRTFVVLW 116 (116)
Q Consensus 83 ~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~a 116 (116)
+..+++++..+|+++.++..+|.++...|++++|
T Consensus 364 ~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A 397 (537)
T 3fp2_A 364 EAFFNETKLKFPTLPEVPTFFAEILTDRGDFDTA 397 (537)
T ss_dssp HHHHHHHHHHCTTCTHHHHHHHHHHHHTTCHHHH
T ss_pred HHHHHHHHHhCCCChHHHHHHHHHHHHhCCHHHH
Confidence 8888888888888888888888888888887654
No 89
>2yhc_A BAMD, UPF0169 lipoprotein YFIO; essential BAM component, membrane protein; 1.80A {Escherichia coli} PDB: 3tgo_A 3q5m_A
Probab=99.79 E-value=1.9e-18 Score=97.78 Aligned_cols=109 Identities=10% Similarity=0.028 Sum_probs=54.7
Q ss_pred chhcHHHHHHHHHHHHhhCCChhH---HHHHHHHHHHh------------------hcChhhHHHHHHHHhccCCCCHHH
Q psy12719 6 DRERVEQSLKEFRNFVDTHSNVVE---ACTLFAQVLVD------------------QEDFDGAEEYFNRSIRVDPENASL 64 (116)
Q Consensus 6 ~~~~~~~A~~~~~~~~~~~~~~~~---~~~~~~~~~~~------------------~~~~~~A~~~~~~a~~~~~~~~~~ 64 (116)
..|++++|+..|+++++.+|+++. +++.+|.++.. .|++++|+..|+++++..|+++.+
T Consensus 53 ~~~~~~~A~~~~~~~l~~~P~~~~~~~a~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~~l~~~P~~~~a 132 (225)
T 2yhc_A 53 KNADLPLAQAAIDRFIRLNPTHPNIDYVMYMRGLTNMALDDSALQGFFGVDRSDRDPQQARAAFSDFSKLVRGYPNSQYT 132 (225)
T ss_dssp HTTCHHHHHHHHHHHHHHCTTCTTHHHHHHHHHHHHHHHHC--------------CCHHHHHHHHHHHHHHTTCTTCTTH
T ss_pred hcCCHHHHHHHHHHHHHHCcCCCcHHHHHHHHHHHHHhhhhhhhhhhhccchhhcCcHHHHHHHHHHHHHHHHCcCChhH
Confidence 344555555555555555544432 34444444433 344555555555555555544322
Q ss_pred H-----------------HHHHHHHHHhcCCHHHHHHHHHHHHhcCCCcH---HHHHHHHHHHHhhccccc
Q psy12719 65 Y-----------------VHRAMLMLQARGNVDEAIKLIEKAISIDKSCM---FAYETLGTIEVQRTFVVL 115 (116)
Q Consensus 65 ~-----------------~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~---~~~~~l~~~~~~~~~~~~ 115 (116)
+ +.+|.+++. .|++++|+..++++++..|+++ .++..+|.++..+|++++
T Consensus 133 ~~a~~~l~~~~~~~~~~~~~~a~~~~~-~~~~~~A~~~~~~~l~~~p~~~~~~~a~~~l~~~~~~~g~~~~ 202 (225)
T 2yhc_A 133 TDATKRLVFLKDRLAKYEYSVAEYYTE-RGAWVAVVNRVEGMLRDYPDTQATRDALPLMENAYRQMQMNAQ 202 (225)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHH-HTCHHHHHHHHHHHHHHSTTSHHHHHHHHHHHHHHHHTTCHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHH-cCcHHHHHHHHHHHHHHCcCCCccHHHHHHHHHHHHHcCCcHH
Confidence 2 334444444 4556666666666665555543 445566666666655544
No 90
>1hxi_A PEX5, peroxisome targeting signal 1 receptor PEX5; alpha helical, transport protein; 1.60A {Trypanosoma brucei} SCOP: a.118.8.1
Probab=99.79 E-value=2.6e-18 Score=88.92 Aligned_cols=87 Identities=11% Similarity=0.046 Sum_probs=82.5
Q ss_pred HHHHHHHHHHHhhcChhhHHHHHHHHhccCCCCHHHHHHHHHHHHHhcCCHHHHHHHHHHHHhcCCCcHHHHHHHHHHHH
Q psy12719 29 EACTLFAQVLVDQEDFDGAEEYFNRSIRVDPENASLYVHRAMLMLQARGNVDEAIKLIEKAISIDKSCMFAYETLGTIEV 108 (116)
Q Consensus 29 ~~~~~~~~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~l~~~~~ 108 (116)
..++.+|..+...|++++|+..|++++..+|+++.+|+.+|.++.. .|++++|+..++++++.+|+++.++..+|.++.
T Consensus 18 ~~~~~~g~~~~~~g~~~~A~~~~~~al~~~P~~~~a~~~lg~~~~~-~g~~~~A~~~~~~al~l~P~~~~~~~~la~~~~ 96 (121)
T 1hxi_A 18 ENPMEEGLSMLKLANLAEAALAFEAVCQKEPEREEAWRSLGLTQAE-NEKDGLAIIALNHARMLDPKDIAVHAALAVSHT 96 (121)
T ss_dssp SCHHHHHHHHHHTTCHHHHHHHHHHHHHHSTTCHHHHHHHHHHHHH-TTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHH
T ss_pred hhHHHHHHHHHHcCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHH-cCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHH
Confidence 3578899999999999999999999999999999999999999887 899999999999999999999999999999999
Q ss_pred hhcccccC
Q psy12719 109 QRTFVVLW 116 (116)
Q Consensus 109 ~~~~~~~a 116 (116)
..|++++|
T Consensus 97 ~~g~~~~A 104 (121)
T 1hxi_A 97 NEHNANAA 104 (121)
T ss_dssp HHHHHHHH
T ss_pred HcCCHHHH
Confidence 99998764
No 91
>2l6j_A TPR repeat-containing protein associated with HSP; tetratricopeptide repeat (TPR), HSP90 CO-factor, protein BIN; NMR {Saccharomyces cerevisiae}
Probab=99.78 E-value=1.4e-17 Score=84.36 Aligned_cols=89 Identities=17% Similarity=0.188 Sum_probs=83.5
Q ss_pred hhHHHHHHHHHHHhhcChhhHHHHHHHHhccCCCCHHHHHHHHHHHHHhcCCHHHHHHHHHHHHhcCCCc------HHHH
Q psy12719 27 VVEACTLFAQVLVDQEDFDGAEEYFNRSIRVDPENASLYVHRAMLMLQARGNVDEAIKLIEKAISIDKSC------MFAY 100 (116)
Q Consensus 27 ~~~~~~~~~~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~------~~~~ 100 (116)
++.++..+|.++...|++++|+..|++++..+|.++.+++++|.++.. .|++++|+..+++++..+|++ ..++
T Consensus 3 ~~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~lg~~~~~-~g~~~~A~~~~~~al~~~p~~~~~~~~~~~~ 81 (111)
T 2l6j_A 3 QFEKQKEQGNSLFKQGLYREAVHCYDQLITAQPQNPVGYSNKAMALIK-LGEYTQAIQMCQQGLRYTSTAEHVAIRSKLQ 81 (111)
T ss_dssp HHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHH-TTCHHHHHHHHHHHHTSCSSTTSHHHHHHHH
T ss_pred hHHHHHHHHHHHHHcCCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHH-hcCHHHHHHHHHHHHHhCCCccHHHHHHHHH
Confidence 467889999999999999999999999999999999999999999888 999999999999999999998 8899
Q ss_pred HHHHHHHHhhcccccC
Q psy12719 101 ETLGTIEVQRTFVVLW 116 (116)
Q Consensus 101 ~~l~~~~~~~~~~~~a 116 (116)
..++.++...|+++.|
T Consensus 82 ~~~~~~~~~~~~~~~a 97 (111)
T 2l6j_A 82 YRLELAQGAVGSVQIP 97 (111)
T ss_dssp HHHHHHHHHHHCCCCC
T ss_pred HHHHHHHHHHHhHhhh
Confidence 9999999999987764
No 92
>1p5q_A FKBP52, FK506-binding protein 4; isomerase; 2.80A {Homo sapiens} SCOP: a.118.8.1 d.26.1.1 PDB: 1qz2_A
Probab=99.78 E-value=8.8e-20 Score=108.79 Aligned_cols=110 Identities=12% Similarity=0.058 Sum_probs=102.9
Q ss_pred chhcHHHHHHHHHHHHhhCCChhHHHHHHHHHHHhhcChhhHHHHHHHHhccCCCC---------------HHHHHHHHH
Q psy12719 6 DRERVEQSLKEFRNFVDTHSNVVEACTLFAQVLVDQEDFDGAEEYFNRSIRVDPEN---------------ASLYVHRAM 70 (116)
Q Consensus 6 ~~~~~~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~a~~~~~~~---------------~~~~~~~~~ 70 (116)
..+++++|++.+++++...|..+.++..+|.+++..|++++|+..|++++..+|.+ ..++.++|.
T Consensus 125 ~L~~~~~A~~~~~~a~~~~p~~a~~~~~~g~~~~~~g~~~~A~~~y~~Al~~~p~~~~~~~~~~~~~~~~~~~~~~nla~ 204 (336)
T 1p5q_A 125 HLKSFEKAKESWEMNSEEKLEQSTIVKERGTVYFKEGKYKQALLQYKKIVSWLEYESSFSNEEAQKAQALRLASHLNLAM 204 (336)
T ss_dssp EEEEEECCCCGGGCCHHHHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHTTTCCCCCSHHHHHHHHHHHHHHHHHHH
T ss_pred EEeecccccchhcCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHhhccccCChHHHHHHHHHHHHHHHHHHH
Confidence 45667788888889999999999999999999999999999999999999999998 689999999
Q ss_pred HHHHhcCCHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHhhcccccC
Q psy12719 71 LMLQARGNVDEAIKLIEKAISIDKSCMFAYETLGTIEVQRTFVVLW 116 (116)
Q Consensus 71 ~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~a 116 (116)
++.. .|++++|+..+.+++..+|+++.+++.+|.++..+|++++|
T Consensus 205 ~~~~-~g~~~~A~~~~~~al~~~p~~~~a~~~lg~~~~~~g~~~~A 249 (336)
T 1p5q_A 205 CHLK-LQAFSAAIESCNKALELDSNNEKGLSRRGEAHLAVNDFELA 249 (336)
T ss_dssp HHHH-TTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHH
T ss_pred HHHH-cCCHHHHHHHHHHHHHhCCCcHHHHHHHHHHHHHCCCHHHH
Confidence 9888 99999999999999999999999999999999999998864
No 93
>2if4_A ATFKBP42; FKBP-like, alpha-beta, TPR-like, alpha, signaling protein; 2.85A {Arabidopsis thaliana}
Probab=99.78 E-value=1.1e-18 Score=104.24 Aligned_cols=106 Identities=15% Similarity=0.137 Sum_probs=83.3
Q ss_pred cccchhcHHHHHHHHHHHHhhCCChh-----------------HHHHHHHHHHHhhcChhhHHHHHHHHhccCCCCHHHH
Q psy12719 3 VPGDRERVEQSLKEFRNFVDTHSNVV-----------------EACTLFAQVLVDQEDFDGAEEYFNRSIRVDPENASLY 65 (116)
Q Consensus 3 ~~~~~~~~~~A~~~~~~~~~~~~~~~-----------------~~~~~~~~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~ 65 (116)
.+...|++++|+..|.+++...|.+. .++.++|.++...|++++|+..|++++..+|++..++
T Consensus 188 ~~~~~g~~~~A~~~y~~Al~~~p~~~~~~~~~~~~~~~~~l~~~~~~nla~~~~~~g~~~~A~~~~~~al~~~p~~~~a~ 267 (338)
T 2if4_A 188 SLFKEEKLEEAMQQYEMAIAYMGDDFMFQLYGKYQDMALAVKNPCHLNIAACLIKLKRYDEAIGHCNIVLTEEEKNPKAL 267 (338)
T ss_dssp HTCSSSCCHHHHHHHHHHHHHSCHHHHHTCCHHHHHHHHHHHTHHHHHHHHHHHTTTCCHHHHHHHHHHHHHCTTCHHHH
T ss_pred HHHhcCCHHHHHHHHHHHHHHhccchhhhhcccHHHHHHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHH
Confidence 35678999999999999999999877 4899999999999999999999999999999999999
Q ss_pred HHHHHHHHHhcCCHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHh
Q psy12719 66 VHRAMLMLQARGNVDEAIKLIEKAISIDKSCMFAYETLGTIEVQ 109 (116)
Q Consensus 66 ~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~l~~~~~~ 109 (116)
+++|.++.. +|++++|+..|++++.++|+++.++..++.+...
T Consensus 268 ~~lg~a~~~-~g~~~~A~~~l~~al~l~p~~~~a~~~L~~l~~~ 310 (338)
T 2if4_A 268 FRRGKAKAE-LGQMDSARDDFRKAQKYAPDDKAIRRELRALAEQ 310 (338)
T ss_dssp HHHHHHHHT-TTCHHHHHHHHHHTTC------------------
T ss_pred HHHHHHHHH-cCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHH
Confidence 999999887 9999999999999999999999999999888543
No 94
>2kck_A TPR repeat; tetratricopeptide repeat, structural genomics, unknown function, PSI-2, protein structure initiative; NMR {Methanococcus maripaludis}
Probab=99.78 E-value=3.9e-18 Score=86.26 Aligned_cols=92 Identities=16% Similarity=0.151 Sum_probs=77.7
Q ss_pred ccchhcHHHHHHHHHHHHhhCCChhHHHHHHHHHHHhhcChhhHHHHHHHHhccCCC--CHHHHHHHHHHHHHhc-CCHH
Q psy12719 4 PGDRERVEQSLKEFRNFVDTHSNVVEACTLFAQVLVDQEDFDGAEEYFNRSIRVDPE--NASLYVHRAMLMLQAR-GNVD 80 (116)
Q Consensus 4 ~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~a~~~~~~--~~~~~~~~~~~~~~~~-~~~~ 80 (116)
+...|++++|+..+++++..+|.+..++..+|.++...|++++|+..+++++..+|. +..++..+|.++.. . |+++
T Consensus 16 ~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~~~l~~~~~~-~~~~~~ 94 (112)
T 2kck_A 16 QYDAGNYTESIDLFEKAIQLDPEESKYWLMKGKALYNLERYEEAVDCYNYVINVIEDEYNKDVWAAKADALRY-IEGKEV 94 (112)
T ss_dssp HHSSCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTSCCTTCHHHHHHHHHHHTT-CSSCSH
T ss_pred HHHhhhHHHHHHHHHHHHHhCcCCHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCcccchHHHHHHHHHHHHH-HhCCHH
Confidence 456788888888888888888888888888888888888888888888888888888 88888888888766 8 8888
Q ss_pred HHHHHHHHHHhcCCCc
Q psy12719 81 EAIKLIEKAISIDKSC 96 (116)
Q Consensus 81 ~a~~~~~~~~~~~~~~ 96 (116)
+|++.+.+++...|.+
T Consensus 95 ~A~~~~~~~~~~~p~~ 110 (112)
T 2kck_A 95 EAEIAEARAKLEHHHH 110 (112)
T ss_dssp HHHHHHHHHGGGCCCC
T ss_pred HHHHHHHHHhhcccCC
Confidence 8888888888888765
No 95
>3ieg_A DNAJ homolog subfamily C member 3; TPR motif, chaperone, endoplasmic reticulum, TPR repeat, UNF protein response; 2.51A {Mus musculus}
Probab=99.78 E-value=5.7e-18 Score=100.41 Aligned_cols=108 Identities=14% Similarity=0.163 Sum_probs=55.1
Q ss_pred chhcHHHHHHHHHHHHhhCCChhHHHHHHHHHHHhhcChhhHHHHHHHHhccCC---CCHHHHHHH------------HH
Q psy12719 6 DRERVEQSLKEFRNFVDTHSNVVEACTLFAQVLVDQEDFDGAEEYFNRSIRVDP---ENASLYVHR------------AM 70 (116)
Q Consensus 6 ~~~~~~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~a~~~~~---~~~~~~~~~------------~~ 70 (116)
..|++++|+..+++++..+|++..++..+|.++...|++++|+..+++++..+| .++.++..+ |.
T Consensus 49 ~~~~~~~A~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~a~ 128 (359)
T 3ieg_A 49 AMGKSKAALPDLTKVIALKMDFTAARLQRGHLLLKQGKLDEAEDDFKKVLKSNPSEQEEKEAESQLVKADEMQRLRSQAL 128 (359)
T ss_dssp HHTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHTCHHHHHHHHHHHHTSCCCHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HccCHHHHHHHHHHHHHhCCCcchHHHHHHHHHHHcCChHHHHHHHHHHHhcCCcccChHHHHHHHHHHHHHHHHHHHHH
Confidence 445555555555555555555555555555555555555555555555555555 444444433 33
Q ss_pred HHHHhcCCHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHhhcccc
Q psy12719 71 LMLQARGNVDEAIKLIEKAISIDKSCMFAYETLGTIEVQRTFVV 114 (116)
Q Consensus 71 ~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~ 114 (116)
++.. .|++++|++.+.+++...|.++.++..+|.++...|+++
T Consensus 129 ~~~~-~~~~~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 171 (359)
T 3ieg_A 129 DAFD-GADYTAAITFLDKILEVCVWDAELRELRAECFIKEGEPR 171 (359)
T ss_dssp HHHH-TTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHH
T ss_pred HHHH-ccCHHHHHHHHHHHHHhCCCchHHHHHHHHHHHHCCCHH
Confidence 3333 444444444444444444444444444444444444443
No 96
>2yhc_A BAMD, UPF0169 lipoprotein YFIO; essential BAM component, membrane protein; 1.80A {Escherichia coli} PDB: 3tgo_A 3q5m_A
Probab=99.78 E-value=2.6e-18 Score=97.23 Aligned_cols=113 Identities=11% Similarity=0.068 Sum_probs=97.9
Q ss_pred ccchhcHHHHHHHHHHHHhhCCChh---HHHHHHHHHHHhhcChhhHHHHHHHHhccCCCCHH---HHHHHHHHHHHh--
Q psy12719 4 PGDRERVEQSLKEFRNFVDTHSNVV---EACTLFAQVLVDQEDFDGAEEYFNRSIRVDPENAS---LYVHRAMLMLQA-- 75 (116)
Q Consensus 4 ~~~~~~~~~A~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~A~~~~~~a~~~~~~~~~---~~~~~~~~~~~~-- 75 (116)
+...|++++|+..|++++...|.++ .+++.+|.++...|++++|+..|+++++.+|+++. +++.+|.+++..
T Consensus 14 ~~~~g~~~~A~~~~~~~~~~~p~~~~~~~a~~~lg~~~~~~~~~~~A~~~~~~~l~~~P~~~~~~~a~~~~g~~~~~~~~ 93 (225)
T 2yhc_A 14 KLQDGNWRQAITQLEALDNRYPFGPYSQQVQLDLIYAYYKNADLPLAQAAIDRFIRLNPTHPNIDYVMYMRGLTNMALDD 93 (225)
T ss_dssp HHHHTCHHHHHHHHHHHHHHCTTSTTHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCTTHHHHHHHHHHHHHHHHC
T ss_pred HHHcCCHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHCcCCCcHHHHHHHHHHHHHhhhh
Confidence 4678999999999999999998764 68999999999999999999999999999998864 789999987651
Q ss_pred ---------------cCCHHHHHHHHHHHHhcCCCcHHHH-----------------HHHHHHHHhhcccccC
Q psy12719 76 ---------------RGNVDEAIKLIEKAISIDKSCMFAY-----------------ETLGTIEVQRTFVVLW 116 (116)
Q Consensus 76 ---------------~~~~~~a~~~~~~~~~~~~~~~~~~-----------------~~l~~~~~~~~~~~~a 116 (116)
.|++++|+..++++++..|+++.++ ..+|.++...|++++|
T Consensus 94 ~~~~~~~~~~~~~~~~~~~~~A~~~~~~~l~~~P~~~~a~~a~~~l~~~~~~~~~~~~~~a~~~~~~~~~~~A 166 (225)
T 2yhc_A 94 SALQGFFGVDRSDRDPQQARAAFSDFSKLVRGYPNSQYTTDATKRLVFLKDRLAKYEYSVAEYYTERGAWVAV 166 (225)
T ss_dssp --------------CCHHHHHHHHHHHHHHTTCTTCTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCHHHH
T ss_pred hhhhhhhccchhhcCcHHHHHHHHHHHHHHHHCcCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCcHHHH
Confidence 4789999999999999999986554 4677888888887654
No 97
>2xpi_A Anaphase-promoting complex subunit CUT9; cell cycle, TPR, ubiquitin ligase; 2.60A {Schizosaccharomyces pombe}
Probab=99.77 E-value=6.4e-18 Score=106.34 Aligned_cols=112 Identities=13% Similarity=0.110 Sum_probs=88.9
Q ss_pred ccchhcHHHHHHHHHHHHhhCCChhHHHHHHHHHHHhhcChhhHHHHHHHHhccCCCCHHHHHHHHHHHHHhcCCHHHHH
Q psy12719 4 PGDRERVEQSLKEFRNFVDTHSNVVEACTLFAQVLVDQEDFDGAEEYFNRSIRVDPENASLYVHRAMLMLQARGNVDEAI 83 (116)
Q Consensus 4 ~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~a~ 83 (116)
+...|++++|++.|+++++.+|.+..+|..+|.++...|++++|+..|++++...|.+..++..++.++.. .|++++|+
T Consensus 383 ~~~~g~~~~A~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~~~~~~~~~~~~~~~l~~~~~~-~g~~~~A~ 461 (597)
T 2xpi_A 383 YLCVNKISEARRYFSKSSTMDPQFGPAWIGFAHSFAIEGEHDQAISAYTTAARLFQGTHLPYLFLGMQHMQ-LGNILLAN 461 (597)
T ss_dssp HHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHTTTTCSHHHHHHHHHHHH-HTCHHHHH
T ss_pred HHHhccHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCccchHHHHHHHHHHHH-cCCHHHHH
Confidence 44567788888888888888888777888888888888888888888888888888888888888888766 78888888
Q ss_pred HHHHHHHhcCCCcHHHHHHHHHHHHhhcccccC
Q psy12719 84 KLIEKAISIDKSCMFAYETLGTIEVQRTFVVLW 116 (116)
Q Consensus 84 ~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~a 116 (116)
+.++++++..|.++.++..++.++...|++++|
T Consensus 462 ~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A 494 (597)
T 2xpi_A 462 EYLQSSYALFQYDPLLLNELGVVAFNKSDMQTA 494 (597)
T ss_dssp HHHHHHHHHCCCCHHHHHHHHHHHHHTTCHHHH
T ss_pred HHHHHHHHhCCCChHHHHHHHHHHHHhCCHHHH
Confidence 888888888888888888888888888777654
No 98
>2y4t_A DNAJ homolog subfamily C member 3; chaperone, endoplasmic reticulum, protein folding, tetratricopeptiderepeat, J domain, unfolded protein respons; 3.00A {Homo sapiens} PDB: 2y4u_A
Probab=99.77 E-value=1.2e-17 Score=102.04 Aligned_cols=112 Identities=18% Similarity=0.124 Sum_probs=101.7
Q ss_pred ccchhcHHHHHHHHHHHHhhCCChhHHHHHHHHHHHhhcChhhHHHHHHHHhccCCCCHHHHHHHHHHHHHhcCCHHHHH
Q psy12719 4 PGDRERVEQSLKEFRNFVDTHSNVVEACTLFAQVLVDQEDFDGAEEYFNRSIRVDPENASLYVHRAMLMLQARGNVDEAI 83 (116)
Q Consensus 4 ~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~a~ 83 (116)
+...|++++|+..|++++..+|+++.++..+|.++...|++++|+..|++++..+|.++.++..+|.++.. .|++++|+
T Consensus 36 ~~~~g~~~~A~~~~~~~l~~~p~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~l~~~~~~-~g~~~~A~ 114 (450)
T 2y4t_A 36 LLAAGQLADALSQFHAAVDGDPDNYIAYYRRATVFLAMGKSKAALPDLTKVIQLKMDFTAARLQRGHLLLK-QGKLDEAE 114 (450)
T ss_dssp HHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHH-TTCHHHHH
T ss_pred HHHCCCHHHHHHHHHHHHHhCCccHHHHHHHHHHHHHCCCHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHH-cCCHHHHH
Confidence 45679999999999999999999999999999999999999999999999999999999999999999888 89999999
Q ss_pred HHHHHHHhcCCCcH---HHHHHH------------HHHHHhhcccccC
Q psy12719 84 KLIEKAISIDKSCM---FAYETL------------GTIEVQRTFVVLW 116 (116)
Q Consensus 84 ~~~~~~~~~~~~~~---~~~~~l------------~~~~~~~~~~~~a 116 (116)
..+++++..+|+++ .++..+ |.++...|++++|
T Consensus 115 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~a~~~~~~~~~~~A 162 (450)
T 2y4t_A 115 DDFKKVLKSNPSENEEKEAQSQLIKSDEMQRLRSQALNAFGSGDYTAA 162 (450)
T ss_dssp HHHHHHHTSCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCHHHH
T ss_pred HHHHHHHhcCCCChhhHHHHHHHHHHHHHHHHHHHHHHHHHcCCHHHH
Confidence 99999999999988 777666 5557777776653
No 99
>2kck_A TPR repeat; tetratricopeptide repeat, structural genomics, unknown function, PSI-2, protein structure initiative; NMR {Methanococcus maripaludis}
Probab=99.77 E-value=2.9e-18 Score=86.73 Aligned_cols=92 Identities=13% Similarity=0.144 Sum_probs=87.5
Q ss_pred CCChhHHHHHHHHHHHhhcChhhHHHHHHHHhccCCCCHHHHHHHHHHHHHhcCCHHHHHHHHHHHHhcCCC--cHHHHH
Q psy12719 24 HSNVVEACTLFAQVLVDQEDFDGAEEYFNRSIRVDPENASLYVHRAMLMLQARGNVDEAIKLIEKAISIDKS--CMFAYE 101 (116)
Q Consensus 24 ~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~--~~~~~~ 101 (116)
+|++..++..+|.++...|++++|+..+++++..+|.+..+++.+|.++.. .|++++|+..++++++..|. ++.++.
T Consensus 2 ~p~~~~~~~~~~~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~~a~~~~~-~~~~~~A~~~~~~a~~~~~~~~~~~~~~ 80 (112)
T 2kck_A 2 VDQNPEEYYLEGVLQYDAGNYTESIDLFEKAIQLDPEESKYWLMKGKALYN-LERYEEAVDCYNYVINVIEDEYNKDVWA 80 (112)
T ss_dssp CCSSTTGGGGHHHHHHSSCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHH-TTCHHHHHHHHHHHHHTSCCTTCHHHHH
T ss_pred CCCcHHHHHHHHHHHHHhhhHHHHHHHHHHHHHhCcCCHHHHHHHHHHHHH-ccCHHHHHHHHHHHHHhCcccchHHHHH
Confidence 688888999999999999999999999999999999999999999999888 89999999999999999999 999999
Q ss_pred HHHHHHHhh-cccccC
Q psy12719 102 TLGTIEVQR-TFVVLW 116 (116)
Q Consensus 102 ~l~~~~~~~-~~~~~a 116 (116)
.++.++... |++++|
T Consensus 81 ~l~~~~~~~~~~~~~A 96 (112)
T 2kck_A 81 AKADALRYIEGKEVEA 96 (112)
T ss_dssp HHHHHHTTCSSCSHHH
T ss_pred HHHHHHHHHhCCHHHH
Confidence 999999999 998764
No 100
>2kat_A Uncharacterized protein; NESG, structure, structural genomics, PSI-2, protein structure initiative; NMR {Bordetella parapertussis}
Probab=99.77 E-value=2.3e-17 Score=84.42 Aligned_cols=100 Identities=11% Similarity=0.123 Sum_probs=88.5
Q ss_pred HHHHHHHHHHhhCCChhHHHHHHHHHHHhhcChhhHHHHHHHHhccCCCCHHHHHHHHHHHHHhcCCHHHHHHHHHHHHh
Q psy12719 12 QSLKEFRNFVDTHSNVVEACTLFAQVLVDQEDFDGAEEYFNRSIRVDPENASLYVHRAMLMLQARGNVDEAIKLIEKAIS 91 (116)
Q Consensus 12 ~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~ 91 (116)
+|+..|+++++.+|+++.++..+|.++...|++++|+..|++++..+|.++.+++.+|.++.. .|++++|+..+++++.
T Consensus 3 ~a~~~~~~al~~~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~la~~~~~-~g~~~~A~~~~~~al~ 81 (115)
T 2kat_A 3 AITERLEAMLAQGTDNMLLRFTLGKTYAEHEQFDAALPHLRAALDFDPTYSVAWKWLGKTLQG-QGDRAGARQAWESGLA 81 (115)
T ss_dssp CHHHHHHHHHTTTCCCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHH-HTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhCCCcHHHHHHHHHHHHHccCHHHHHHHHHHHHHHCCCcHHHHHHHHHHHHH-cCCHHHHHHHHHHHHH
Confidence 578899999999999999999999999999999999999999999999999999999999888 8999999999999999
Q ss_pred cCCCc--HHHHHHHHHHHHhhcc
Q psy12719 92 IDKSC--MFAYETLGTIEVQRTF 112 (116)
Q Consensus 92 ~~~~~--~~~~~~l~~~~~~~~~ 112 (116)
..|.. ......+...+...++
T Consensus 82 ~~~~~~~~~~~~~l~~~l~~l~~ 104 (115)
T 2kat_A 82 AAQSRGDQQVVKELQVFLRRLAR 104 (115)
T ss_dssp HHHHHTCHHHHHHHHHHHHHHHH
T ss_pred hccccccHHHHHHHHHHHHHhcc
Confidence 98754 4455556555555443
No 101
>2e2e_A Formate-dependent nitrite reductase complex NRFG; TPR, cytochrome C biogenesis, O157:H7 EDL933, formate- nitrite reductase complex, lyase; 2.05A {Escherichia coli}
Probab=99.76 E-value=1.8e-17 Score=90.45 Aligned_cols=103 Identities=14% Similarity=0.177 Sum_probs=92.9
Q ss_pred cccchhcHHHHHHHHHHHHhhCCChhHHHHHHHHH-HHhhcCh--hhHHHHHHHHhccCCCCHHHHHHHHHHHHHhcCCH
Q psy12719 3 VPGDRERVEQSLKEFRNFVDTHSNVVEACTLFAQV-LVDQEDF--DGAEEYFNRSIRVDPENASLYVHRAMLMLQARGNV 79 (116)
Q Consensus 3 ~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~--~~A~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~ 79 (116)
++...|++++|+..|++++..+|+++.++..+|.+ +...|++ ++|+..+++++..+|.++.+++.+|.++.. .|++
T Consensus 53 ~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~la~~l~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~la~~~~~-~g~~ 131 (177)
T 2e2e_A 53 YYLWQNDYSNSLLAYRQALQLRGENAELYAALATVLYYQASQHMTAQTRAMIDKALALDSNEITALMLLASDAFM-QANY 131 (177)
T ss_dssp HHHHTTCHHHHHHHHHHHHHHHCSCHHHHHHHHHHHHHHTTTCCCHHHHHHHHHHHHHCTTCHHHHHHHHHHHHH-TTCH
T ss_pred HHHHcCCHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHhcCCcchHHHHHHHHHHHHhCCCcHHHHHHHHHHHHH-cccH
Confidence 34568999999999999999999999999999999 8899998 999999999999999999999999999888 8999
Q ss_pred HHHHHHHHHHHhcCCCcHHHHHHHHHH
Q psy12719 80 DEAIKLIEKAISIDKSCMFAYETLGTI 106 (116)
Q Consensus 80 ~~a~~~~~~~~~~~~~~~~~~~~l~~~ 106 (116)
++|+..+.+++..+|+++.....+..+
T Consensus 132 ~~A~~~~~~al~~~p~~~~~~~~~~~i 158 (177)
T 2e2e_A 132 AQAIELWQKVMDLNSPRINRTQLVESI 158 (177)
T ss_dssp HHHHHHHHHHHHTCCTTSCHHHHHHHH
T ss_pred HHHHHHHHHHHhhCCCCccHHHHHHHH
Confidence 999999999999999886554444433
No 102
>2hr2_A Hypothetical protein; alpha-alpha superhelix fold, structural genomics, joint CENT structural genomics, JCSG, protein structure initiative; 2.54A {Chlorobium tepidum} SCOP: a.118.8.8
Probab=99.76 E-value=1e-17 Score=89.77 Aligned_cols=88 Identities=13% Similarity=-0.015 Sum_probs=82.2
Q ss_pred hHHHHHHHHHHHhhcChhhHHHHHHHHhccCCC-------CHH-----HHHHHHHHHHHhcCCHHHHHHHHHHHHhc---
Q psy12719 28 VEACTLFAQVLVDQEDFDGAEEYFNRSIRVDPE-------NAS-----LYVHRAMLMLQARGNVDEAIKLIEKAISI--- 92 (116)
Q Consensus 28 ~~~~~~~~~~~~~~~~~~~A~~~~~~a~~~~~~-------~~~-----~~~~~~~~~~~~~~~~~~a~~~~~~~~~~--- 92 (116)
...+...|..++..|++++|+..|++++.++|+ +.. +|.++|.++.. +|++++|+..+.+++++
T Consensus 11 a~~~~~~G~~l~~~g~~eeAi~~Y~kAL~l~p~~~~~~a~~~~~~~a~a~~n~g~al~~-Lgr~~eAl~~~~kAL~l~n~ 89 (159)
T 2hr2_A 11 AYLALSDAQRQLVAGEYDEAAANCRRAMEISHTMPPEEAFDHAGFDAFCHAGLAEALAG-LRSFDEALHSADKALHYFNR 89 (159)
T ss_dssp HHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHTTSCTTSCCCHHHHHHHHHHHHHHHHHH-TTCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHCCCHHHHHHHHHHHHhhCCCCcchhhhhhccchHHHHHHHHHHHHH-CCCHHHHHHHHHHHHHhhhc
Confidence 567889999999999999999999999999999 444 99999999887 99999999999999999
Q ss_pred ----CCCcHHHH----HHHHHHHHhhcccccC
Q psy12719 93 ----DKSCMFAY----ETLGTIEVQRTFVVLW 116 (116)
Q Consensus 93 ----~~~~~~~~----~~l~~~~~~~~~~~~a 116 (116)
+|++..+| +++|.++..+|++++|
T Consensus 90 ~~e~~pd~~~A~~~~~~~rG~aL~~lgr~eEA 121 (159)
T 2hr2_A 90 RGELNQDEGKLWISAVYSRALALDGLGRGAEA 121 (159)
T ss_dssp HCCTTSTHHHHHHHHHHHHHHHHHHTTCHHHH
T ss_pred cccCCCchHHHHHHHHHhHHHHHHHCCCHHHH
Confidence 99999999 9999999999999875
No 103
>2y4t_A DNAJ homolog subfamily C member 3; chaperone, endoplasmic reticulum, protein folding, tetratricopeptiderepeat, J domain, unfolded protein respons; 3.00A {Homo sapiens} PDB: 2y4u_A
Probab=99.76 E-value=2.7e-17 Score=100.51 Aligned_cols=112 Identities=13% Similarity=0.129 Sum_probs=92.2
Q ss_pred ccchhcHHHHHHHHHHHHhhCCChhHHHHHHHHHHHhhcChhhHHHHHHHHhccCCCCH---HHHHHH------------
Q psy12719 4 PGDRERVEQSLKEFRNFVDTHSNVVEACTLFAQVLVDQEDFDGAEEYFNRSIRVDPENA---SLYVHR------------ 68 (116)
Q Consensus 4 ~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~a~~~~~~~~---~~~~~~------------ 68 (116)
+...|++++|+..++++++.+|++..++..+|.++...|++++|+..|++++..+|.+. .++..+
T Consensus 70 ~~~~g~~~~A~~~~~~al~~~p~~~~~~~~l~~~~~~~g~~~~A~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~ 149 (450)
T 2y4t_A 70 FLAMGKSKAALPDLTKVIQLKMDFTAARLQRGHLLLKQGKLDEAEDDFKKVLKSNPSENEEKEAQSQLIKSDEMQRLRSQ 149 (450)
T ss_dssp HHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHTSCCCHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHCCCHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHcCCHHHHHHHHHHHHhcCCCChhhHHHHHHHHHHHHHHHHHHH
Confidence 45678888888888888888888888888888888888888888888888888888877 665544
Q ss_pred HHHHHHhcCCHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHhhcccccC
Q psy12719 69 AMLMLQARGNVDEAIKLIEKAISIDKSCMFAYETLGTIEVQRTFVVLW 116 (116)
Q Consensus 69 ~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~a 116 (116)
|.++.. .|++++|+..+++++...|.++.++..+|.++...|++++|
T Consensus 150 a~~~~~-~~~~~~A~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A 196 (450)
T 2y4t_A 150 ALNAFG-SGDYTAAIAFLDKILEVCVWDAELRELRAECFIKEGEPRKA 196 (450)
T ss_dssp HHHHHH-HTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCGGGG
T ss_pred HHHHHH-cCCHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHCCCHHHH
Confidence 555666 78888888888888888888888888888888888887764
No 104
>2ond_A Cleavage stimulation factor 77 kDa subunit; HAT domain, structural protein; 2.80A {Mus musculus} SCOP: a.118.8.7
Probab=99.76 E-value=1.1e-17 Score=98.53 Aligned_cols=110 Identities=9% Similarity=0.016 Sum_probs=71.1
Q ss_pred chhcHHHHHHHHHHHHhhCCChhH-HHHHHHHHHHhhcChhhHHHHHHHHhccCCCCHHHHHHHHHHHHHhcCCHHHHHH
Q psy12719 6 DRERVEQSLKEFRNFVDTHSNVVE-ACTLFAQVLVDQEDFDGAEEYFNRSIRVDPENASLYVHRAMLMLQARGNVDEAIK 84 (116)
Q Consensus 6 ~~~~~~~A~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ 84 (116)
..|++++|...|+++++..|.++. +|..+|.++.+.|++++|+..|++++..+|.+..++...+.+.+...|++++|..
T Consensus 111 ~~~~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~a~~~~p~~~~~~~~~a~~~~~~~~~~~~A~~ 190 (308)
T 2ond_A 111 SRMKYEKVHSIYNRLLAIEDIDPTLVYIQYMKFARRAEGIKSGRMIFKKAREDARTRHHVYVTAALMEYYCSKDKSVAFK 190 (308)
T ss_dssp HTTCHHHHHHHHHHHHTSSSSCTHHHHHHHHHHHHHHHCHHHHHHHHHHHHTSTTCCTHHHHHHHHHHHHTSCCHHHHHH
T ss_pred hcCCHHHHHHHHHHHHhccccCccHHHHHHHHHHHHhcCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHcCCHHHHHH
Confidence 345666666666666666666654 6666666666666666666666666666666655555555443322467777777
Q ss_pred HHHHHHhcCCCcHHHHHHHHHHHHhhccccc
Q psy12719 85 LIEKAISIDKSCMFAYETLGTIEVQRTFVVL 115 (116)
Q Consensus 85 ~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~ 115 (116)
.|+++++.+|+++.+|..++.++...|++++
T Consensus 191 ~~~~al~~~p~~~~~~~~~~~~~~~~g~~~~ 221 (308)
T 2ond_A 191 IFELGLKKYGDIPEYVLAYIDYLSHLNEDNN 221 (308)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHHHTTCCHHH
T ss_pred HHHHHHHhCCCcHHHHHHHHHHHHHCCCHHH
Confidence 7777777777777777777777777776654
No 105
>2xpi_A Anaphase-promoting complex subunit CUT9; cell cycle, TPR, ubiquitin ligase; 2.60A {Schizosaccharomyces pombe}
Probab=99.76 E-value=1.7e-17 Score=104.44 Aligned_cols=112 Identities=8% Similarity=0.038 Sum_probs=75.9
Q ss_pred ccchhcHHHHHHHHHHHHhhCCChhHHHHHHHHHHHhhcChhhHHHHHHHHhcc------CCCC-HHHHHHHHHHHHHhc
Q psy12719 4 PGDRERVEQSLKEFRNFVDTHSNVVEACTLFAQVLVDQEDFDGAEEYFNRSIRV------DPEN-ASLYVHRAMLMLQAR 76 (116)
Q Consensus 4 ~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~a~~~------~~~~-~~~~~~~~~~~~~~~ 76 (116)
+...|++++|++.|++++...|.++.++..+|.++...|++++|+..|++++.. +|++ ..++..+|.++.. .
T Consensus 451 ~~~~g~~~~A~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~~~~~~~~~~~~p~~~~~~~~~l~~~~~~-~ 529 (597)
T 2xpi_A 451 HMQLGNILLANEYLQSSYALFQYDPLLLNELGVVAFNKSDMQTAINHFQNALLLVKKTQSNEKPWAATWANLGHAYRK-L 529 (597)
T ss_dssp HHHHTCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHSCCCSGGGHHHHHHHHHHHHH-T
T ss_pred HHHcCCHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHhCCHHHHHHHHHHHHHhhhccccchhhHHHHHHHHHHHHHH-h
Confidence 344566677777777777767766666777777777777777777777776665 4443 5666777777665 6
Q ss_pred CCHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHhhcccccC
Q psy12719 77 GNVDEAIKLIEKAISIDKSCMFAYETLGTIEVQRTFVVLW 116 (116)
Q Consensus 77 ~~~~~a~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~a 116 (116)
|++++|++.++++++.+|+++.++..++.++...|++++|
T Consensus 530 g~~~~A~~~~~~~~~~~p~~~~~~~~l~~~~~~~g~~~~A 569 (597)
T 2xpi_A 530 KMYDAAIDALNQGLLLSTNDANVHTAIALVYLHKKIPGLA 569 (597)
T ss_dssp TCHHHHHHHHHHHHHHSSCCHHHHHHHHHHHHHTTCHHHH
T ss_pred cCHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHhCCHHHH
Confidence 7777777777777777777777777777777777766543
No 106
>1na3_A Designed protein CTPR2; de novo protein; HET: IPT; 1.55A {Unidentified} SCOP: k.38.1.1 PDB: 2avp_A
Probab=99.76 E-value=5.6e-17 Score=79.42 Aligned_cols=86 Identities=28% Similarity=0.453 Sum_probs=80.7
Q ss_pred CChhHHHHHHHHHHHhhcChhhHHHHHHHHhccCCCCHHHHHHHHHHHHHhcCCHHHHHHHHHHHHhcCCCcHHHHHHHH
Q psy12719 25 SNVVEACTLFAQVLVDQEDFDGAEEYFNRSIRVDPENASLYVHRAMLMLQARGNVDEAIKLIEKAISIDKSCMFAYETLG 104 (116)
Q Consensus 25 ~~~~~~~~~~~~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~l~ 104 (116)
|.++.++..+|.++...|++++|+.++++++..+|.++.+++.+|.++.. .|++++|+..+++++..+|+++.++..++
T Consensus 6 ~~~~~~~~~la~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~l~~~~~~-~~~~~~A~~~~~~a~~~~p~~~~~~~~l~ 84 (91)
T 1na3_A 6 GNSAEAWYNLGNAYYKQGDYDEAIEYYQKALELDPNNAEAWYNLGNAYYK-QGDYDEAIEYYQKALELDPNNAEAKQNLG 84 (91)
T ss_dssp CHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHH-TTCHHHHHHHHHHHHHHCTTCHHHHHHHH
T ss_pred cccHHHHHHHHHHHHHccCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHH-HhhHHHHHHHHHHHHhcCCCCHHHHHHHH
Confidence 34578899999999999999999999999999999999999999999888 89999999999999999999999999999
Q ss_pred HHHHhhc
Q psy12719 105 TIEVQRT 111 (116)
Q Consensus 105 ~~~~~~~ 111 (116)
.++...|
T Consensus 85 ~~~~~~g 91 (91)
T 1na3_A 85 NAKQKQG 91 (91)
T ss_dssp HHHHHHC
T ss_pred HHHHhcC
Confidence 9988764
No 107
>3fp2_A TPR repeat-containing protein YHR117W; TOM71, mitochondria translocation, allosteric REG phosphoprotein, TPR repeat, ATP-binding; 1.98A {Saccharomyces cerevisiae} PDB: 3fp3_A 3fp4_A 3lca_A
Probab=99.75 E-value=1.5e-17 Score=103.39 Aligned_cols=111 Identities=15% Similarity=0.246 Sum_probs=105.4
Q ss_pred ccchhcHHHHHHHHHHHHhhCCChhHHHHHHHHHHHhhcChhhHHHHHHHHhccCCCCHHHHHHHHHHHHHhcCCHHHHH
Q psy12719 4 PGDRERVEQSLKEFRNFVDTHSNVVEACTLFAQVLVDQEDFDGAEEYFNRSIRVDPENASLYVHRAMLMLQARGNVDEAI 83 (116)
Q Consensus 4 ~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~a~ 83 (116)
+...|++++|+..+++++..+|+ ..++..+|.++...|++++|+..+++++..+|.++.++..+|.++.. .|++++|+
T Consensus 253 ~~~~~~~~~A~~~~~~~~~~~~~-~~~~~~l~~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~l~~~~~~-~~~~~~A~ 330 (537)
T 3fp2_A 253 HFLKNNLLDAQVLLQESINLHPT-PNSYIFLALTLADKENSQEFFKFFQKAVDLNPEYPPTYYHRGQMYFI-LQDYKNAK 330 (537)
T ss_dssp HHHTTCHHHHHHHHHHHHHHCCC-HHHHHHHHHHTCCSSCCHHHHHHHHHHHHHCTTCHHHHHHHHHHHHH-TTCHHHHH
T ss_pred HHhcccHHHHHHHHHHHHhcCCC-chHHHHHHHHHHHhcCHHHHHHHHHHHhccCCCCHHHHHHHHHHHHh-cCCHHHHH
Confidence 34578999999999999999999 89999999999999999999999999999999999999999999887 89999999
Q ss_pred HHHHHHHhcCCCcHHHHHHHHHHHHhhcccccC
Q psy12719 84 KLIEKAISIDKSCMFAYETLGTIEVQRTFVVLW 116 (116)
Q Consensus 84 ~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~a 116 (116)
..+++++..+|+++.++..+|.++...|++++|
T Consensus 331 ~~~~~a~~~~~~~~~~~~~la~~~~~~g~~~~A 363 (537)
T 3fp2_A 331 EDFQKAQSLNPENVYPYIQLACLLYKQGKFTES 363 (537)
T ss_dssp HHHHHHHHHCTTCSHHHHHHHHHHHHTTCHHHH
T ss_pred HHHHHHHHhCCCCHHHHHHHHHHHHHcCCHHHH
Confidence 999999999999999999999999999998764
No 108
>2c2l_A CHIP, carboxy terminus of HSP70-interacting protein; chaperone, E3 ligase, ubiquitinylation, TPR, heat-shock protein complex; 3.3A {Mus musculus} SCOP: a.118.8.1 g.44.1.2
Probab=99.75 E-value=5e-18 Score=99.05 Aligned_cols=92 Identities=15% Similarity=0.086 Sum_probs=87.9
Q ss_pred ccchhcHHHHHHHHHHHHhhCCChhHHHHHHHHHHHhhcChhhHHHHHHHHhccCCCCHHHHHHHHHHHHHhcCCHHHHH
Q psy12719 4 PGDRERVEQSLKEFRNFVDTHSNVVEACTLFAQVLVDQEDFDGAEEYFNRSIRVDPENASLYVHRAMLMLQARGNVDEAI 83 (116)
Q Consensus 4 ~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~a~ 83 (116)
+...|++++|+..|.+++..+|+++.++..+|.++...|++++|+..+++++..+|+++.+++.+|.++.. .|++++|+
T Consensus 14 ~~~~g~~~~A~~~~~~al~~~p~~~~~~~~la~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~lg~~~~~-~g~~~~A~ 92 (281)
T 2c2l_A 14 LFVGRKYPEAAACYGRAITRNPLVAVYYTNRALCYLKMQQPEQALADCRRALELDGQSVKAHFFLGQCQLE-MESYDEAI 92 (281)
T ss_dssp HHHTTCHHHHHHHHHHHHHHCSCCHHHHHHHHHHHHHTTCHHHHHHHHHHHTTSCTTCHHHHHHHHHHHHH-TTCHHHHH
T ss_pred HHHcCCHHHHHHHHHHHHHhCCccHHHHHHHHHHHHHhcCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHH-cCCHHHHH
Confidence 45689999999999999999999999999999999999999999999999999999999999999999887 99999999
Q ss_pred HHHHHHHhcCCCc
Q psy12719 84 KLIEKAISIDKSC 96 (116)
Q Consensus 84 ~~~~~~~~~~~~~ 96 (116)
..+++++..+|++
T Consensus 93 ~~~~~al~l~p~~ 105 (281)
T 2c2l_A 93 ANLQRAYSLAKEQ 105 (281)
T ss_dssp HHHHHHHHHHHHT
T ss_pred HHHHHHHHhCccc
Confidence 9999999998865
No 109
>2r5s_A Uncharacterized protein VP0806; APC090868.1, vibrio parahaemolyticus RIMD 22 structural genomics, PSI-2, protein structure initiative; HET: MES; 2.14A {Vibrio parahaemolyticus}
Probab=99.75 E-value=1.5e-17 Score=90.87 Aligned_cols=80 Identities=10% Similarity=0.050 Sum_probs=73.8
Q ss_pred HHHHHHHHHHHhhCCChhHHHHHHHHHHHhhcChhhHHHHHHHHhccCCCC--HHHHHHHHHHHHHhcCCHHHHHHHHHH
Q psy12719 11 EQSLKEFRNFVDTHSNVVEACTLFAQVLVDQEDFDGAEEYFNRSIRVDPEN--ASLYVHRAMLMLQARGNVDEAIKLIEK 88 (116)
Q Consensus 11 ~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~a~~~~~~~--~~~~~~~~~~~~~~~~~~~~a~~~~~~ 88 (116)
.+|+..++++++.+|+++.++..+|.++...|++++|+..|+++++.+|.. +.++..+|.++.. .|+.++|+..|++
T Consensus 91 ~~a~~~~~~al~~~P~~~~~~~~la~~~~~~g~~~~A~~~~~~~l~~~p~~~~~~a~~~l~~~~~~-~g~~~~A~~~y~~ 169 (176)
T 2r5s_A 91 SPELKRLEQELAANPDNFELACELAVQYNQVGRDEEALELLWNILKVNLGAQDGEVKKTFMDILSA-LGQGNAIASKYRR 169 (176)
T ss_dssp CHHHHHHHHHHHHSTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHTTCTTTTTTHHHHHHHHHHHH-HCSSCHHHHHHHH
T ss_pred chHHHHHHHHHHhCCCCHHHHHHHHHHHHHcccHHHHHHHHHHHHHhCcccChHHHHHHHHHHHHH-hCCCCcHHHHHHH
Confidence 357899999999999999999999999999999999999999999999976 6699999999777 8999999999998
Q ss_pred HHh
Q psy12719 89 AIS 91 (116)
Q Consensus 89 ~~~ 91 (116)
++.
T Consensus 170 al~ 172 (176)
T 2r5s_A 170 QLY 172 (176)
T ss_dssp HHH
T ss_pred HHH
Confidence 874
No 110
>1hh8_A P67PHOX, NCF-2, neutrophil cytosol factor 2; cell cycle, phagocyte oxidase factor, SH3 domain, repeat, TPR repeat cell cycle; HET: FLC; 1.8A {Homo sapiens} SCOP: a.118.8.1 PDB: 1wm5_A 1e96_B*
Probab=99.75 E-value=1e-16 Score=89.58 Aligned_cols=101 Identities=11% Similarity=0.065 Sum_probs=90.9
Q ss_pred cccchhcHHHHHHHHHHHHhhCCChhHHHHHHHHHHHhhcChhhHHHHHHHHhccCCCCH----------------HHHH
Q psy12719 3 VPGDRERVEQSLKEFRNFVDTHSNVVEACTLFAQVLVDQEDFDGAEEYFNRSIRVDPENA----------------SLYV 66 (116)
Q Consensus 3 ~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~a~~~~~~~~----------------~~~~ 66 (116)
++...|++++|+..|++++..+|.++.++..+|.++...|++++|+..|++++...|.+. .+++
T Consensus 46 ~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~lg~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~ 125 (213)
T 1hh8_A 46 MYTILKNMTEAEKAFTRSINRDKHLAVAYFQRGMLYYQTEKYDLAIKDLKEALIQLRGNQLIDYKILGLQFKLFACEVLY 125 (213)
T ss_dssp HHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTTTTCSEEECGGGTBCCEEEHHHHHH
T ss_pred HHHHcCCHHHHHHHHHHHHHhCccchHHHHHHHHHHHHcccHHHHHHHHHHHHHhCCCccHHHHHHhccccCccchHHHH
Confidence 356789999999999999999999999999999999999999999999999999888766 8999
Q ss_pred HHHHHHHHhcCCHHHHHHHHHHHHhcCCCcHHHHHHHH
Q psy12719 67 HRAMLMLQARGNVDEAIKLIEKAISIDKSCMFAYETLG 104 (116)
Q Consensus 67 ~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~l~ 104 (116)
.+|.++.. .|++++|...+++++..+|+........+
T Consensus 126 ~l~~~~~~-~g~~~~A~~~~~~al~~~p~~~~~~~~~a 162 (213)
T 1hh8_A 126 NIAFMYAK-KEEWKKAEEQLALATSMKSEPRHSKIDKA 162 (213)
T ss_dssp HHHHHHHH-TTCHHHHHHHHHHHHTTCCSGGGGHHHHH
T ss_pred HHHHHHHH-ccCHHHHHHHHHHHHHcCcccccchHHHH
Confidence 99999888 89999999999999999997754444333
No 111
>1qqe_A Vesicular transport protein SEC17; helix-turn-helix TPR-like repeat, protein transport; 2.90A {Saccharomyces cerevisiae} SCOP: a.118.8.1
Probab=99.74 E-value=9.5e-18 Score=98.24 Aligned_cols=112 Identities=13% Similarity=0.104 Sum_probs=89.8
Q ss_pred ccchhcHHHHHHHHHHHHhhCCCh------hHHHHHHHHHHHhh-cChhhHHHHHHHHhccCCCC------HHHHHHHHH
Q psy12719 4 PGDRERVEQSLKEFRNFVDTHSNV------VEACTLFAQVLVDQ-EDFDGAEEYFNRSIRVDPEN------ASLYVHRAM 70 (116)
Q Consensus 4 ~~~~~~~~~A~~~~~~~~~~~~~~------~~~~~~~~~~~~~~-~~~~~A~~~~~~a~~~~~~~------~~~~~~~~~ 70 (116)
+...|++++|+..|++++...|.. ..++..+|.++... |++++|+.+|++++.+.|.. ..++.++|.
T Consensus 87 ~~~~g~~~~A~~~~~~Al~l~~~~g~~~~~a~~~~~lg~~~~~~lg~~~~A~~~~~~Al~~~~~~~~~~~~~~~~~~lg~ 166 (292)
T 1qqe_A 87 FKSGGNSVNAVDSLENAIQIFTHRGQFRRGANFKFELGEILENDLHDYAKAIDCYELAGEWYAQDQSVALSNKCFIKCAD 166 (292)
T ss_dssp HHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred HHHCCCHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHhCCChHHHHHHHHHHHH
Confidence 456788899999999988887643 45788889988886 99999999999998887754 456888898
Q ss_pred HHHHhcCCHHHHHHHHHHHHhcCCCcHH-------HHHHHHHHHHhhcccccC
Q psy12719 71 LMLQARGNVDEAIKLIEKAISIDKSCMF-------AYETLGTIEVQRTFVVLW 116 (116)
Q Consensus 71 ~~~~~~~~~~~a~~~~~~~~~~~~~~~~-------~~~~l~~~~~~~~~~~~a 116 (116)
++.. +|++++|+..+++++...|+... ++..+|.++..+|++++|
T Consensus 167 ~~~~-~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~lg~~~~~~g~~~~A 218 (292)
T 1qqe_A 167 LKAL-DGQYIEASDIYSKLIKSSMGNRLSQWSLKDYFLKKGLCQLAATDAVAA 218 (292)
T ss_dssp HHHH-TTCHHHHHHHHHHHHHTTSSCTTTGGGHHHHHHHHHHHHHHTTCHHHH
T ss_pred HHHH-hCCHHHHHHHHHHHHHHHhcCCcccHHHHHHHHHHHHHHHHcCCHHHH
Confidence 8777 89999999999999988876542 577888888888887654
No 112
>2fbn_A 70 kDa peptidylprolyl isomerase, putative; sulfur SAD, PFL2275C, TPR-containing domain, structural genomics; 1.63A {Plasmodium falciparum} SCOP: a.118.8.1
Probab=99.74 E-value=3e-18 Score=95.20 Aligned_cols=111 Identities=12% Similarity=0.031 Sum_probs=95.2
Q ss_pred cchhcHHHHHHHHHHHHhhCCChhHHHHHHHHHHHhhcChhhHHHHHHHHhccCCCCH----------------HHHHHH
Q psy12719 5 GDRERVEQSLKEFRNFVDTHSNVVEACTLFAQVLVDQEDFDGAEEYFNRSIRVDPENA----------------SLYVHR 68 (116)
Q Consensus 5 ~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~a~~~~~~~~----------------~~~~~~ 68 (116)
...++++++.+.+.......+.....+..+|..++..|++++|+..|++++...|.++ .++.++
T Consensus 15 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 94 (198)
T 2fbn_A 15 ENLYFQGAKKSIYDYTDEEKVQSAFDIKEEGNEFFKKNEINEAIVKYKEALDFFIHTEEWDDQILLDKKKNIEISCNLNL 94 (198)
T ss_dssp -------CCCSGGGCCHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTTTTCTTCCCHHHHHHHHHHHHHHHHHH
T ss_pred hhhhhccccCchhhCCHHHHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHhcccccchhhHHHHHHHHHHHHHHHH
Confidence 3456677777777776666677788899999999999999999999999999999887 899999
Q ss_pred HHHHHHhcCCHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHhhcccccC
Q psy12719 69 AMLMLQARGNVDEAIKLIEKAISIDKSCMFAYETLGTIEVQRTFVVLW 116 (116)
Q Consensus 69 ~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~a 116 (116)
|.++.. .|++++|+..+.+++..+|+++.++..+|.++...|++++|
T Consensus 95 a~~~~~-~~~~~~A~~~~~~al~~~p~~~~~~~~lg~~~~~~~~~~~A 141 (198)
T 2fbn_A 95 ATCYNK-NKDYPKAIDHASKVLKIDKNNVKALYKLGVANMYFGFLEEA 141 (198)
T ss_dssp HHHHHH-TTCHHHHHHHHHHHHHHSTTCHHHHHHHHHHHHHHTCHHHH
T ss_pred HHHHHH-hcCHHHHHHHHHHHHHhCcccHHHHHHHHHHHHHcccHHHH
Confidence 999888 89999999999999999999999999999999999998764
No 113
>2lni_A Stress-induced-phosphoprotein 1; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative, chaperone; NMR {Homo sapiens}
Probab=99.74 E-value=5.4e-17 Score=84.33 Aligned_cols=92 Identities=15% Similarity=0.168 Sum_probs=86.9
Q ss_pred CCChhHHHHHHHHHHHhhcChhhHHHHHHHHhccCCCCHHHHHHHHHHHHHhcCCHHHHHHHHHHHHhcCCCcHHHHHHH
Q psy12719 24 HSNVVEACTLFAQVLVDQEDFDGAEEYFNRSIRVDPENASLYVHRAMLMLQARGNVDEAIKLIEKAISIDKSCMFAYETL 103 (116)
Q Consensus 24 ~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~l 103 (116)
.|.+...+..+|.++...|++++|+..+++++..+|.+..+++.+|.++.. .|++++|+..+++++..+|.++.++..+
T Consensus 12 ~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~la~~~~~-~~~~~~A~~~~~~a~~~~~~~~~~~~~l 90 (133)
T 2lni_A 12 NPDLALMVKNKGNECFQKGDYPQAMKHYTEAIKRNPKDAKLYSNRAACYTK-LLEFQLALKDCEECIQLEPTFIKGYTRK 90 (133)
T ss_dssp SSCHHHHHHHHHHHHHHTTCSHHHHHHHHHHHTTCTTCHHHHHHHHHHHTT-TTCHHHHHHHHHHHHHHCTTCHHHHHHH
T ss_pred CcccHHHHHHHHHHHHHcCCHHHHHHHHHHHHHcCCCcHHHHHHHHHHHHH-hccHHHHHHHHHHHHHhCCCchHHHHHH
Confidence 466788999999999999999999999999999999999999999999877 8999999999999999999999999999
Q ss_pred HHHHHhhcccccC
Q psy12719 104 GTIEVQRTFVVLW 116 (116)
Q Consensus 104 ~~~~~~~~~~~~a 116 (116)
|.++...|++++|
T Consensus 91 a~~~~~~~~~~~A 103 (133)
T 2lni_A 91 AAALEAMKDYTKA 103 (133)
T ss_dssp HHHHHHTTCHHHH
T ss_pred HHHHHHHhhHHHH
Confidence 9999999998764
No 114
>1kt0_A FKBP51, 51 kDa FK506-binding protein; FKBP-like ppiase, TPR repeats, isomerase; 2.70A {Homo sapiens} SCOP: a.118.8.1 d.26.1.1 d.26.1.1 PDB: 1kt1_A 3o5d_A
Probab=99.74 E-value=6.6e-19 Score=108.72 Aligned_cols=110 Identities=10% Similarity=0.049 Sum_probs=102.0
Q ss_pred chhcHHHHHHHHHHHHhhCCChhHHHHHHHHHHHhhcChhhHHHHHHHHhccCCCC---------------HHHHHHHHH
Q psy12719 6 DRERVEQSLKEFRNFVDTHSNVVEACTLFAQVLVDQEDFDGAEEYFNRSIRVDPEN---------------ASLYVHRAM 70 (116)
Q Consensus 6 ~~~~~~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~a~~~~~~~---------------~~~~~~~~~ 70 (116)
..+++++|++.+..++...|.....+..+|..++..|++++|+..|++++..+|.+ ..+++++|.
T Consensus 246 ~l~~~~~A~~~~~~~~~~~~~~a~~~~~~G~~~~~~g~~~~A~~~y~~Al~~~p~~~~~~~~~~~~~~~~~~~~~~nla~ 325 (457)
T 1kt0_A 246 TLKSFEKAKESWEMDTKEKLEQAAIVKEKGTVYFKGGKYMQAVIQYGKIVSWLEMEYGLSEKESKASESFLLAAFLNLAM 325 (457)
T ss_dssp EEEEEECCCCGGGSCHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHTTCCSCCHHHHHHHHHHHHHHHHHHHH
T ss_pred hhhhcccCcchhhcCHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHhcccccCChHHHHHHHHHHHHHHHHHHH
Confidence 34567778888888888889999999999999999999999999999999999988 689999999
Q ss_pred HHHHhcCCHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHhhcccccC
Q psy12719 71 LMLQARGNVDEAIKLIEKAISIDKSCMFAYETLGTIEVQRTFVVLW 116 (116)
Q Consensus 71 ~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~a 116 (116)
+++. +|++++|+..+.+++.++|+++.+++.+|.++..+|++++|
T Consensus 326 ~~~~-~g~~~~A~~~~~~al~~~p~~~~a~~~~g~a~~~~g~~~~A 370 (457)
T 1kt0_A 326 CYLK-LREYTKAVECCDKALGLDSANEKGLYRRGEAQLLMNEFESA 370 (457)
T ss_dssp HHHH-TTCHHHHHHHHHHHHHHSTTCHHHHHHHHHHHHHTTCHHHH
T ss_pred HHHH-hcCHHHHHHHHHHHHhcCCccHHHHHHHHHHHHHccCHHHH
Confidence 9888 99999999999999999999999999999999999998865
No 115
>3edt_B KLC 2, kinesin light chain 2; superhelical, structural genomics, structural genomics conso SGC, microtubule, motor protein, phosphoprotein; 2.70A {Homo sapiens} PDB: 3ceq_A
Probab=99.74 E-value=1e-17 Score=96.48 Aligned_cols=113 Identities=16% Similarity=0.216 Sum_probs=101.0
Q ss_pred cccchhcHHHHHHHHHHHHhh--------CCChhHHHHHHHHHHHhhcChhhHHHHHHHHhcc--------CCCCHHHHH
Q psy12719 3 VPGDRERVEQSLKEFRNFVDT--------HSNVVEACTLFAQVLVDQEDFDGAEEYFNRSIRV--------DPENASLYV 66 (116)
Q Consensus 3 ~~~~~~~~~~A~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~a~~~--------~~~~~~~~~ 66 (116)
.+...|++++|+..+.+++.. .|....++..+|.++...|++++|+.++++++.. +|....++.
T Consensus 52 ~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~ 131 (283)
T 3edt_B 52 VYRDQNKYKEAAHLLNDALAIREKTLGKDHPAVAATLNNLAVLYGKRGKYKEAEPLCKRALEIREKVLGKFHPDVAKQLN 131 (283)
T ss_dssp HHHHTTCHHHHHHHHHHHHHHHHHHTCTTCHHHHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHHHHHHCTTCHHHHHHHH
T ss_pred HHHHcccHHHHHHHHHHHHHHHHHHcCCcchHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHcCCCChHHHHHHH
Confidence 345689999999999999987 3666789999999999999999999999999987 466788999
Q ss_pred HHHHHHHHhcCCHHHHHHHHHHHHhc--------CCCcHHHHHHHHHHHHhhcccccC
Q psy12719 67 HRAMLMLQARGNVDEAIKLIEKAISI--------DKSCMFAYETLGTIEVQRTFVVLW 116 (116)
Q Consensus 67 ~~~~~~~~~~~~~~~a~~~~~~~~~~--------~~~~~~~~~~l~~~~~~~~~~~~a 116 (116)
.+|.++.. .|++++|+..+++++.. .|....++..+|.++...|++++|
T Consensus 132 ~la~~~~~-~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A 188 (283)
T 3edt_B 132 NLALLCQN-QGKAEEVEYYYRRALEIYATRLGPDDPNVAKTKNNLASCYLKQGKYQDA 188 (283)
T ss_dssp HHHHHHHT-TTCHHHHHHHHHHHHHHHHHHSCTTCHHHHHHHHHHHHHHHHHTCHHHH
T ss_pred HHHHHHHH-cCCHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHcCCHHHH
Confidence 99999887 89999999999999998 677788999999999999998764
No 116
>2ond_A Cleavage stimulation factor 77 kDa subunit; HAT domain, structural protein; 2.80A {Mus musculus} SCOP: a.118.8.7
Probab=99.73 E-value=1.3e-16 Score=93.99 Aligned_cols=105 Identities=14% Similarity=0.111 Sum_probs=85.7
Q ss_pred HHHHHHHHHHHhhCCChhHHHHHHHHHHHh-------hcCh-------hhHHHHHHHHhc-cCCCCHHHHHHHHHHHHHh
Q psy12719 11 EQSLKEFRNFVDTHSNVVEACTLFAQVLVD-------QEDF-------DGAEEYFNRSIR-VDPENASLYVHRAMLMLQA 75 (116)
Q Consensus 11 ~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~-------~~A~~~~~~a~~-~~~~~~~~~~~~~~~~~~~ 75 (116)
++|+..|++++..+|.++.+|..+|..+.. .|++ ++|+..|++++. ++|++..+|..+|.++..
T Consensus 33 ~~a~~~~~~al~~~p~~~~~w~~~~~~~~~~~~~l~~~g~~~~~~~~~~~A~~~~~rAl~~~~p~~~~~~~~~~~~~~~- 111 (308)
T 2ond_A 33 KRVMFAYEQCLLVLGHHPDIWYEAAQYLEQSSKLLAEKGDMNNAKLFSDEAANIYERAISTLLKKNMLLYFAYADYEES- 111 (308)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHTSCCHHHHHHHHHHHHHHHHHHTTTTTTCHHHHHHHHHHHHH-
T ss_pred HHHHHHHHHHHHHcCCCHHHHHHHHHHHHHhchhhhhccchhhcccchHHHHHHHHHHHHHhCcccHHHHHHHHHHHHh-
Confidence 678888888888888888888888887763 4775 788888888888 688888888888888666
Q ss_pred cCCHHHHHHHHHHHHhcCCCcHH-HHHHHHHHHHhhcccccC
Q psy12719 76 RGNVDEAIKLIEKAISIDKSCMF-AYETLGTIEVQRTFVVLW 116 (116)
Q Consensus 76 ~~~~~~a~~~~~~~~~~~~~~~~-~~~~l~~~~~~~~~~~~a 116 (116)
.|++++|...|+++++..|.++. +|..++.++...|++++|
T Consensus 112 ~~~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~~~~~~~~~A 153 (308)
T 2ond_A 112 RMKYEKVHSIYNRLLAIEDIDPTLVYIQYMKFARRAEGIKSG 153 (308)
T ss_dssp TTCHHHHHHHHHHHHTSSSSCTHHHHHHHHHHHHHHHCHHHH
T ss_pred cCCHHHHHHHHHHHHhccccCccHHHHHHHHHHHHhcCHHHH
Confidence 78888888888888888888776 788888888888777653
No 117
>3rkv_A Putative peptidylprolyl isomerase; structural genomics, APC102156, PSI-biology, midwest center structural genomics, MCSG; 2.41A {Caenorhabditis elegans}
Probab=99.72 E-value=4.8e-17 Score=87.76 Aligned_cols=89 Identities=18% Similarity=0.153 Sum_probs=83.2
Q ss_pred hhHHHHHHHHHHHhhcChhhHHHHHHHHhcc------------------CCCCHHHHHHHHHHHHHhcCCHHHHHHHHHH
Q psy12719 27 VVEACTLFAQVLVDQEDFDGAEEYFNRSIRV------------------DPENASLYVHRAMLMLQARGNVDEAIKLIEK 88 (116)
Q Consensus 27 ~~~~~~~~~~~~~~~~~~~~A~~~~~~a~~~------------------~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~ 88 (116)
....+...|..++..|++++|+..|.+++.. +|....+++++|.+++. .|++++|+..+.+
T Consensus 10 ~a~~~~~~G~~~~~~~~~~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~~-~~~~~~A~~~~~~ 88 (162)
T 3rkv_A 10 SVEALRQKGNELFVQKDYKEAIDAYRDALTRLDTLILREKPGEPEWVELDRKNIPLYANMSQCYLN-IGDLHEAEETSSE 88 (162)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHTSCTTSHHHHHHHHTHHHHHHHHHHHHHH-HTCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHHHHHh-cCcHHHHHHHHHH
Confidence 3667899999999999999999999999998 67777899999999888 8999999999999
Q ss_pred HHhcCCCcHHHHHHHHHHHHhhcccccC
Q psy12719 89 AISIDKSCMFAYETLGTIEVQRTFVVLW 116 (116)
Q Consensus 89 ~~~~~~~~~~~~~~l~~~~~~~~~~~~a 116 (116)
++..+|+++.+++.+|.++..+|++++|
T Consensus 89 al~~~p~~~~a~~~~g~~~~~~g~~~~A 116 (162)
T 3rkv_A 89 VLKREETNEKALFRRAKARIAAWKLDEA 116 (162)
T ss_dssp HHHHSTTCHHHHHHHHHHHHHTTCHHHH
T ss_pred HHhcCCcchHHHHHHHHHHHHHhcHHHH
Confidence 9999999999999999999999998864
No 118
>1elw_A TPR1-domain of HOP; HOP, TPR-domain, peptide-complex, helical repeat, HSP70, protein binding, chaperone; 1.60A {Homo sapiens} SCOP: a.118.8.1
Probab=99.72 E-value=2.4e-16 Score=80.15 Aligned_cols=89 Identities=16% Similarity=0.159 Sum_probs=84.1
Q ss_pred hhHHHHHHHHHHHhhcChhhHHHHHHHHhccCCCCHHHHHHHHHHHHHhcCCHHHHHHHHHHHHhcCCCcHHHHHHHHHH
Q psy12719 27 VVEACTLFAQVLVDQEDFDGAEEYFNRSIRVDPENASLYVHRAMLMLQARGNVDEAIKLIEKAISIDKSCMFAYETLGTI 106 (116)
Q Consensus 27 ~~~~~~~~~~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~l~~~ 106 (116)
.+..+..+|..+...|++++|+..+++++..+|.++.++..+|.++.. .|++++|+..+++++...|+++.++..+|.+
T Consensus 3 ~~~~~~~~~~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~a~~~~~-~~~~~~A~~~~~~~~~~~~~~~~~~~~~a~~ 81 (118)
T 1elw_A 3 QVNELKEKGNKALSVGNIDDALQCYSEAIKLDPHNHVLYSNRSAAYAK-KGDYQKAYEDGCKTVDLKPDWGKGYSRKAAA 81 (118)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHH-HTCHHHHHHHHHHHHHHCTTCHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHcccHHHHHHHHHHHHHHCCCcHHHHHHHHHHHHh-hccHHHHHHHHHHHHHhCcccHHHHHHHHHH
Confidence 467789999999999999999999999999999999999999999888 8999999999999999999999999999999
Q ss_pred HHhhcccccC
Q psy12719 107 EVQRTFVVLW 116 (116)
Q Consensus 107 ~~~~~~~~~a 116 (116)
+...|++++|
T Consensus 82 ~~~~~~~~~A 91 (118)
T 1elw_A 82 LEFLNRFEEA 91 (118)
T ss_dssp HHHTTCHHHH
T ss_pred HHHHhhHHHH
Confidence 9999998764
No 119
>2c2l_A CHIP, carboxy terminus of HSP70-interacting protein; chaperone, E3 ligase, ubiquitinylation, TPR, heat-shock protein complex; 3.3A {Mus musculus} SCOP: a.118.8.1 g.44.1.2
Probab=99.72 E-value=1.4e-16 Score=92.89 Aligned_cols=91 Identities=19% Similarity=0.188 Sum_probs=86.8
Q ss_pred CChhHHHHHHHHHHHhhcChhhHHHHHHHHhccCCCCHHHHHHHHHHHHHhcCCHHHHHHHHHHHHhcCCCcHHHHHHHH
Q psy12719 25 SNVVEACTLFAQVLVDQEDFDGAEEYFNRSIRVDPENASLYVHRAMLMLQARGNVDEAIKLIEKAISIDKSCMFAYETLG 104 (116)
Q Consensus 25 ~~~~~~~~~~~~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~l~ 104 (116)
|.++..+..+|..+...|++++|+..|++++..+|.++.+++++|.++.. .|++++|+..++++++.+|+++.++..+|
T Consensus 1 p~~a~~~~~~g~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~la~~~~~-~~~~~~A~~~~~~al~~~p~~~~~~~~lg 79 (281)
T 2c2l_A 1 SPSAQELKEQGNRLFVGRKYPEAAACYGRAITRNPLVAVYYTNRALCYLK-MQQPEQALADCRRALELDGQSVKAHFFLG 79 (281)
T ss_dssp CCCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCSCCHHHHHHHHHHHHH-TTCHHHHHHHHHHHTTSCTTCHHHHHHHH
T ss_pred ChhHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCccHHHHHHHHHHHHH-hcCHHHHHHHHHHHHHhCCCCHHHHHHHH
Confidence 56678899999999999999999999999999999999999999999888 99999999999999999999999999999
Q ss_pred HHHHhhcccccC
Q psy12719 105 TIEVQRTFVVLW 116 (116)
Q Consensus 105 ~~~~~~~~~~~a 116 (116)
.++..+|++++|
T Consensus 80 ~~~~~~g~~~~A 91 (281)
T 2c2l_A 80 QCQLEMESYDEA 91 (281)
T ss_dssp HHHHHTTCHHHH
T ss_pred HHHHHcCCHHHH
Confidence 999999998864
No 120
>2gw1_A Mitochondrial precursor proteins import receptor; TPR, protein transport; 3.00A {Saccharomyces cerevisiae}
Probab=99.72 E-value=1.4e-17 Score=103.00 Aligned_cols=107 Identities=18% Similarity=0.168 Sum_probs=54.2
Q ss_pred hhcHHHHHHHHHHHHhhCCChhHHHHHHHHHHHhhcChhhHHHHHHHHhccCCCCHHHHHHHHHHHHHhcCCHHHHHHHH
Q psy12719 7 RERVEQSLKEFRNFVDTHSNVVEACTLFAQVLVDQEDFDGAEEYFNRSIRVDPENASLYVHRAMLMLQARGNVDEAIKLI 86 (116)
Q Consensus 7 ~~~~~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~ 86 (116)
.|++++|+..+++++..+|.+..++..+|.++...|++++|+..+++++..+|.++.++..+|.++.. .|++++|+..+
T Consensus 283 ~~~~~~A~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~l~~~~~~-~~~~~~A~~~~ 361 (514)
T 2gw1_A 283 RNDSTEYYNYFDKALKLDSNNSSVYYHRGQMNFILQNYDQAGKDFDKAKELDPENIFPYIQLACLAYR-ENKFDDCETLF 361 (514)
T ss_dssp SSCCTTGGGHHHHHHTTCTTCTHHHHHHHHHHHHTTCTTHHHHHHHHHHHTCSSCSHHHHHHHHHTTT-TTCHHHHHHHH
T ss_pred CCCHHHHHHHHHHHhhcCcCCHHHHHHHHHHHHHhCCHHHHHHHHHHHHHhChhhHHHHHHHHHHHHH-cCCHHHHHHHH
Confidence 34444444445554444444444455555555555555555555555555555555555555555443 45555555555
Q ss_pred HHHHhcCCCcHHHHHHHHHHHHhhcccc
Q psy12719 87 EKAISIDKSCMFAYETLGTIEVQRTFVV 114 (116)
Q Consensus 87 ~~~~~~~~~~~~~~~~l~~~~~~~~~~~ 114 (116)
.+++...|+++.++..+|.++...|+++
T Consensus 362 ~~~~~~~~~~~~~~~~la~~~~~~~~~~ 389 (514)
T 2gw1_A 362 SEAKRKFPEAPEVPNFFAEILTDKNDFD 389 (514)
T ss_dssp HHHHHHSTTCSHHHHHHHHHHHHTTCHH
T ss_pred HHHHHHcccCHHHHHHHHHHHHHCCCHH
Confidence 5555555555555555555555555444
No 121
>2vyi_A SGTA protein; chaperone, TPR repeat, phosphoprotein, tetratricopeptide repeat protein, HOST-virus interaction; 2.4A {Homo sapiens} SCOP: k.38.1.1
Probab=99.71 E-value=1.3e-16 Score=82.49 Aligned_cols=93 Identities=25% Similarity=0.309 Sum_probs=87.1
Q ss_pred hCCChhHHHHHHHHHHHhhcChhhHHHHHHHHhccCCCCHHHHHHHHHHHHHhcCCHHHHHHHHHHHHhcCCCcHHHHHH
Q psy12719 23 THSNVVEACTLFAQVLVDQEDFDGAEEYFNRSIRVDPENASLYVHRAMLMLQARGNVDEAIKLIEKAISIDKSCMFAYET 102 (116)
Q Consensus 23 ~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~ 102 (116)
.+|.+...+..+|..+...|++++|+..+++++..+|.++.++..+|.++.. .|++++|+..+.+++...|+++.++..
T Consensus 7 ~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~a~~~~~-~~~~~~A~~~~~~~~~~~~~~~~~~~~ 85 (131)
T 2vyi_A 7 EDSAEAERLKTEGNEQMKVENFEAAVHFYGKAIELNPANAVYFCNRAAAYSK-LGNYAGAVQDCERAICIDPAYSKAYGR 85 (131)
T ss_dssp CHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHH-TTCHHHHHHHHHHHHHHCTTCHHHHHH
T ss_pred cchhhhHHHHHHHHHHHHccCHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHH-hhchHHHHHHHHHHHhcCccCHHHHHH
Confidence 4466678999999999999999999999999999999999999999999887 899999999999999999999999999
Q ss_pred HHHHHHhhcccccC
Q psy12719 103 LGTIEVQRTFVVLW 116 (116)
Q Consensus 103 l~~~~~~~~~~~~a 116 (116)
+|.++...|++++|
T Consensus 86 ~~~~~~~~~~~~~A 99 (131)
T 2vyi_A 86 MGLALSSLNKHVEA 99 (131)
T ss_dssp HHHHHHHTTCHHHH
T ss_pred HHHHHHHhCCHHHH
Confidence 99999999998764
No 122
>2gw1_A Mitochondrial precursor proteins import receptor; TPR, protein transport; 3.00A {Saccharomyces cerevisiae}
Probab=99.71 E-value=7.6e-17 Score=99.67 Aligned_cols=112 Identities=22% Similarity=0.272 Sum_probs=76.5
Q ss_pred ccchhcHHHHHHHHHHHHhhCCChhHHHHHHHHHHHhhcChhhHHHHHHHHhccCCCCHH------HHHHHHHHHHHh--
Q psy12719 4 PGDRERVEQSLKEFRNFVDTHSNVVEACTLFAQVLVDQEDFDGAEEYFNRSIRVDPENAS------LYVHRAMLMLQA-- 75 (116)
Q Consensus 4 ~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~a~~~~~~~~~------~~~~~~~~~~~~-- 75 (116)
+...|++++|+..+++++...|+++.++..+|.++...|++++|+..+++++...|.++. ++..+|.++...
T Consensus 348 ~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~la~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~l~~~~~~~~~ 427 (514)
T 2gw1_A 348 AYRENKFDDCETLFSEAKRKFPEAPEVPNFFAEILTDKNDFDKALKQYDLAIELENKLDGIYVGIAPLVGKATLLTRNPT 427 (514)
T ss_dssp TTTTTCHHHHHHHHHHHHHHSTTCSHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHTSSSCSSCSHHHHHHHHHHHTSCC
T ss_pred HHHcCCHHHHHHHHHHHHHHcccCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHhhhccchHHHHHHHHHHHHHHHhhhhh
Confidence 455667777777777777777777777777777777777777777777777766666543 667777764331
Q ss_pred cCCHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHhhccccc
Q psy12719 76 RGNVDEAIKLIEKAISIDKSCMFAYETLGTIEVQRTFVVL 115 (116)
Q Consensus 76 ~~~~~~a~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~ 115 (116)
.|++++|+..+++++..+|+++.++..+|.++...|++++
T Consensus 428 ~~~~~~A~~~~~~a~~~~~~~~~~~~~la~~~~~~g~~~~ 467 (514)
T 2gw1_A 428 VENFIEATNLLEKASKLDPRSEQAKIGLAQMKLQQEDIDE 467 (514)
T ss_dssp TTHHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHH
T ss_pred cCCHHHHHHHHHHHHHhCcccHHHHHHHHHHHHHhcCHHH
Confidence 4777777777777777777777777777777777776654
No 123
>3mkr_A Coatomer subunit epsilon; tetratricopeptide repeats (TPR), beta-hairpin, alpha-solenoi transport protein; 2.60A {Bos taurus}
Probab=99.71 E-value=5.4e-16 Score=90.91 Aligned_cols=95 Identities=16% Similarity=0.207 Sum_probs=88.2
Q ss_pred chhcHHHHHHHHHHHHhhCCChhHHHHHHHHHHHhhcChhhHHHHHHHHhccCCCCHHHHHHHHHHHHHhcCCHHH-HHH
Q psy12719 6 DRERVEQSLKEFRNFVDTHSNVVEACTLFAQVLVDQEDFDGAEEYFNRSIRVDPENASLYVHRAMLMLQARGNVDE-AIK 84 (116)
Q Consensus 6 ~~~~~~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~-a~~ 84 (116)
..|++++|+..|+++++.+|+++.++..+|.++...|++++|+..+++++..+|+++.++.++|.++.. .|+.++ +.+
T Consensus 178 ~~~~~~eA~~~~~~~l~~~p~~~~~~~~la~~~~~~g~~~eA~~~l~~al~~~p~~~~~l~~l~~~~~~-~g~~~eaa~~ 256 (291)
T 3mkr_A 178 GGEKLQDAYYIFQEMADKCSPTLLLLNGQAACHMAQGRWEAAEGVLQEALDKDSGHPETLINLVVLSQH-LGKPPEVTNR 256 (291)
T ss_dssp CTTHHHHHHHHHHHHHHHSCCCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHH-TTCCHHHHHH
T ss_pred CchHHHHHHHHHHHHHHhCCCcHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHH-cCCCHHHHHH
Confidence 358999999999999999999999999999999999999999999999999999999999999999887 898876 578
Q ss_pred HHHHHHhcCCCcHHHHH
Q psy12719 85 LIEKAISIDKSCMFAYE 101 (116)
Q Consensus 85 ~~~~~~~~~~~~~~~~~ 101 (116)
+++++++.+|+++.+..
T Consensus 257 ~~~~~~~~~P~~~~~~d 273 (291)
T 3mkr_A 257 YLSQLKDAHRSHPFIKE 273 (291)
T ss_dssp HHHHHHHHCTTCHHHHH
T ss_pred HHHHHHHhCCCChHHHH
Confidence 99999999999987654
No 124
>3edt_B KLC 2, kinesin light chain 2; superhelical, structural genomics, structural genomics conso SGC, microtubule, motor protein, phosphoprotein; 2.70A {Homo sapiens} PDB: 3ceq_A
Probab=99.71 E-value=5.7e-17 Score=93.39 Aligned_cols=113 Identities=17% Similarity=0.256 Sum_probs=100.0
Q ss_pred cccchhcHHHHHHHHHHHHhh--------CCChhHHHHHHHHHHHhhcChhhHHHHHHHHhcc--------CCCCHHHHH
Q psy12719 3 VPGDRERVEQSLKEFRNFVDT--------HSNVVEACTLFAQVLVDQEDFDGAEEYFNRSIRV--------DPENASLYV 66 (116)
Q Consensus 3 ~~~~~~~~~~A~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~a~~~--------~~~~~~~~~ 66 (116)
++...|++++|+..+.+++.. +|....++..+|.++...|++++|+.++++++.. .|....++.
T Consensus 94 ~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~ 173 (283)
T 3edt_B 94 LYGKRGKYKEAEPLCKRALEIREKVLGKFHPDVAKQLNNLALLCQNQGKAEEVEYYYRRALEIYATRLGPDDPNVAKTKN 173 (283)
T ss_dssp HHHTTTCHHHHHHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHHHHHSCTTCHHHHHHHH
T ss_pred HHHHhccHHHHHHHHHHHHHHHHHHcCCCChHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHH
Confidence 356789999999999999988 4677889999999999999999999999999998 677788999
Q ss_pred HHHHHHHHhcCCHHHHHHHHHHHHhc-------------------------------------------------CCCcH
Q psy12719 67 HRAMLMLQARGNVDEAIKLIEKAISI-------------------------------------------------DKSCM 97 (116)
Q Consensus 67 ~~~~~~~~~~~~~~~a~~~~~~~~~~-------------------------------------------------~~~~~ 97 (116)
.+|.++.. .|++++|+..+++++.. .|..+
T Consensus 174 ~la~~~~~-~g~~~~A~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 252 (283)
T 3edt_B 174 NLASCYLK-QGKYQDAETLYKEILTRAHEKEFGSVNGDNKPIWMHAEEREESKDKRRDSAPYGEYGSWYKACKVDSPTVN 252 (283)
T ss_dssp HHHHHHHH-HTCHHHHHHHHHHHHHHHHHHHSSSCCSSCCCHHHHHHHHHHTTCCCCC------------CCCCCCHHHH
T ss_pred HHHHHHHH-cCCHHHHHHHHHHHHHHHHHhcCCCcchhHHHHHHHHHHHHhcCCchhHHHHHHHHHHHHHhcCCCCHHHH
Confidence 99999888 89999999999999975 24556
Q ss_pred HHHHHHHHHHHhhcccccC
Q psy12719 98 FAYETLGTIEVQRTFVVLW 116 (116)
Q Consensus 98 ~~~~~l~~~~~~~~~~~~a 116 (116)
.++..+|.++...|++++|
T Consensus 253 ~~~~~la~~~~~~g~~~~A 271 (283)
T 3edt_B 253 TTLRSLGALYRRQGKLEAA 271 (283)
T ss_dssp HHHHHHHHHHHHTTCHHHH
T ss_pred HHHHHHHHHHHHcCCHHHH
Confidence 7889999999999998764
No 125
>2dba_A Smooth muscle cell associated protein-1, isoform 2; tetratricopeptide repeat, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.71 E-value=3.7e-16 Score=82.55 Aligned_cols=93 Identities=20% Similarity=0.105 Sum_probs=87.0
Q ss_pred hCCChhHHHHHHHHHHHhhcChhhHHHHHHHHhccCCCC---HHHHHHHHHHHHHhcCCHHHHHHHHHHHHhcCCCcHHH
Q psy12719 23 THSNVVEACTLFAQVLVDQEDFDGAEEYFNRSIRVDPEN---ASLYVHRAMLMLQARGNVDEAIKLIEKAISIDKSCMFA 99 (116)
Q Consensus 23 ~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~a~~~~~~~---~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~ 99 (116)
..|.+...+..+|..+...|++++|+..|++++..+|++ ..+++.+|.++.. .|++++|+..+++++..+|+++.+
T Consensus 23 ~~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~~~~~a~~~~~-~~~~~~A~~~~~~~~~~~~~~~~~ 101 (148)
T 2dba_A 23 PGASSVEQLRKEGNELFKCGDYGGALAAYTQALGLDATPQDQAVLHRNRAACHLK-LEDYDKAETEASKAIEKDGGDVKA 101 (148)
T ss_dssp TTCCCHHHHHHHHHHHHTTTCHHHHHHHHHHHHTSCCCHHHHHHHHHHHHHHHHH-TTCHHHHHHHHHHHHHHTSCCHHH
T ss_pred cchHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHcccchHHHHHHHHHHHHHHH-HccHHHHHHHHHHHHhhCccCHHH
Confidence 456778899999999999999999999999999999988 8899999999888 899999999999999999999999
Q ss_pred HHHHHHHHHhhcccccC
Q psy12719 100 YETLGTIEVQRTFVVLW 116 (116)
Q Consensus 100 ~~~l~~~~~~~~~~~~a 116 (116)
+..+|.++...|++++|
T Consensus 102 ~~~~a~~~~~~~~~~~A 118 (148)
T 2dba_A 102 LYRRSQALEKLGRLDQA 118 (148)
T ss_dssp HHHHHHHHHHHTCHHHH
T ss_pred HHHHHHHHHHcCCHHHH
Confidence 99999999999998764
No 126
>1qqe_A Vesicular transport protein SEC17; helix-turn-helix TPR-like repeat, protein transport; 2.90A {Saccharomyces cerevisiae} SCOP: a.118.8.1
Probab=99.71 E-value=2.1e-17 Score=96.79 Aligned_cols=112 Identities=9% Similarity=-0.015 Sum_probs=96.3
Q ss_pred ccchhcHHHHHHHHHHHHhhCCC------hhHHHHHHHHHHHhhcChhhHHHHHHHHhccCCCC------HHHHHHHHHH
Q psy12719 4 PGDRERVEQSLKEFRNFVDTHSN------VVEACTLFAQVLVDQEDFDGAEEYFNRSIRVDPEN------ASLYVHRAML 71 (116)
Q Consensus 4 ~~~~~~~~~A~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~A~~~~~~a~~~~~~~------~~~~~~~~~~ 71 (116)
+...|++++|++.|.+++...+. .+.++..+|.++...|++++|+.+|++++.+.|.. ..++.++|.+
T Consensus 47 ~~~~g~~~~A~~~~~~al~~~~~~~~~~~~a~~~~~lg~~~~~~g~~~~A~~~~~~Al~l~~~~g~~~~~a~~~~~lg~~ 126 (292)
T 1qqe_A 47 YRLRKELNLAGDSFLKAADYQKKAGNEDEAGNTYVEAYKCFKSGGNSVNAVDSLENAIQIFTHRGQFRRGANFKFELGEI 126 (292)
T ss_dssp HHHTTCTHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred HHHcCCHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHH
Confidence 45678999999999999987532 25689999999999999999999999999987654 4578999999
Q ss_pred HHHhc-CCHHHHHHHHHHHHhcCCCc------HHHHHHHHHHHHhhcccccC
Q psy12719 72 MLQAR-GNVDEAIKLIEKAISIDKSC------MFAYETLGTIEVQRTFVVLW 116 (116)
Q Consensus 72 ~~~~~-~~~~~a~~~~~~~~~~~~~~------~~~~~~l~~~~~~~~~~~~a 116 (116)
+.. . |++++|+..+++++.+.|.. ..++..+|.++..+|++++|
T Consensus 127 ~~~-~lg~~~~A~~~~~~Al~~~~~~~~~~~~~~~~~~lg~~~~~~g~~~~A 177 (292)
T 1qqe_A 127 LEN-DLHDYAKAIDCYELAGEWYAQDQSVALSNKCFIKCADLKALDGQYIEA 177 (292)
T ss_dssp HHH-TTCCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHH
T ss_pred HHH-hhcCHHHHHHHHHHHHHHHHhCCChHHHHHHHHHHHHHHHHhCCHHHH
Confidence 776 6 99999999999999997754 46789999999999998864
No 127
>2xev_A YBGF; tetratricopeptide, alpha-helical, metal binding; 1.57A {Xanthomonas campestris}
Probab=99.70 E-value=2.3e-16 Score=81.83 Aligned_cols=87 Identities=11% Similarity=-0.004 Sum_probs=81.1
Q ss_pred HHHHHHHHHHHhhcChhhHHHHHHHHhccCCCCH---HHHHHHHHHHHHhcCCHHHHHHHHHHHHhcCCCc---HHHHHH
Q psy12719 29 EACTLFAQVLVDQEDFDGAEEYFNRSIRVDPENA---SLYVHRAMLMLQARGNVDEAIKLIEKAISIDKSC---MFAYET 102 (116)
Q Consensus 29 ~~~~~~~~~~~~~~~~~~A~~~~~~a~~~~~~~~---~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~---~~~~~~ 102 (116)
..++.+|..+...|++++|+..|++++..+|+++ .+++.+|.+++. .|++++|+..+++++..+|++ +.++..
T Consensus 3 ~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~p~~~~~~~~~~~lg~~~~~-~~~~~~A~~~~~~~~~~~p~~~~~~~~~~~ 81 (129)
T 2xev_A 3 RTAYNVAFDALKNGKYDDASQLFLSFLELYPNGVYTPNALYWLGESYYA-TRNFQLAEAQFRDLVSRYPTHDKAAGGLLK 81 (129)
T ss_dssp CCHHHHHHHHHHTTCHHHHHHHHHHHHHHCSSSTTHHHHHHHHHHHHHH-TTCHHHHHHHHHHHHHHCTTSTTHHHHHHH
T ss_pred HHHHHHHHHHHHhCCHHHHHHHHHHHHHHCCCCcccHHHHHHHHHHHHH-hccHHHHHHHHHHHHHHCCCCcccHHHHHH
Confidence 3567899999999999999999999999999988 799999999888 899999999999999999998 888999
Q ss_pred HHHHHHhhcccccC
Q psy12719 103 LGTIEVQRTFVVLW 116 (116)
Q Consensus 103 l~~~~~~~~~~~~a 116 (116)
+|.++...|++++|
T Consensus 82 la~~~~~~g~~~~A 95 (129)
T 2xev_A 82 LGLSQYGEGKNTEA 95 (129)
T ss_dssp HHHHHHHTTCHHHH
T ss_pred HHHHHHHcCCHHHH
Confidence 99999999998764
No 128
>3ma5_A Tetratricopeptide repeat domain protein; NESG, structural genomics, PSI-2, protein structure initiative; 2.80A {Salinibacter ruber} PDB: 2kcl_A 2kcv_A
Probab=99.70 E-value=3.4e-16 Score=78.34 Aligned_cols=90 Identities=16% Similarity=0.183 Sum_probs=76.4
Q ss_pred hCCChhHHHHHHHHHHHhhcChhhHHHHHHHHhccCCCCHHHHHHHHHHHHHhcCCHHHHHHHHHHHHhcCCCc--HHHH
Q psy12719 23 THSNVVEACTLFAQVLVDQEDFDGAEEYFNRSIRVDPENASLYVHRAMLMLQARGNVDEAIKLIEKAISIDKSC--MFAY 100 (116)
Q Consensus 23 ~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~--~~~~ 100 (116)
.+|+++.+++.+|.++...|++++|+..|+++++.+|+++.+++.+|.++.. .|++++|++.+++++++.|.. ....
T Consensus 2 ~~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~~~a~~~lg~~~~~-~g~~~~A~~~~~~al~l~~~~~~~~~~ 80 (100)
T 3ma5_A 2 EDPEDPFTRYALAQEHLKHDNASRALALFEELVETDPDYVGTYYHLGKLYER-LDRTDDAIDTYAQGIEVAREEGTQKDL 80 (100)
T ss_dssp ---CCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSTTCTHHHHHHHHHHHH-TTCHHHHHHHHHHHHHHHHHHSCHHHH
T ss_pred CCccCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCcHHHHHHHHHHHHH-cCCHHHHHHHHHHHHhhhhcCCchhHH
Confidence 4689999999999999999999999999999999999999999999999888 999999999999999987644 4455
Q ss_pred HHHHHHHHhhccc
Q psy12719 101 ETLGTIEVQRTFV 113 (116)
Q Consensus 101 ~~l~~~~~~~~~~ 113 (116)
..+..++...+..
T Consensus 81 ~~l~~~l~~~~~~ 93 (100)
T 3ma5_A 81 SELQDAKLKAEGL 93 (100)
T ss_dssp HHHHHHHHHHHTT
T ss_pred HHHHHHHHHcccc
Confidence 5666666555543
No 129
>1na0_A Designed protein CTPR3; de novo protein; HET: IPT; 1.60A {Unidentified} SCOP: k.38.1.1 PDB: 2wqh_A 3kd7_A
Probab=99.70 E-value=6.7e-16 Score=79.17 Aligned_cols=92 Identities=25% Similarity=0.349 Sum_probs=84.0
Q ss_pred CCCh-hHHHHHHHHHHHhhcChhhHHHHHHHHhccCCCCHHHHHHHHHHHHHhcCCHHHHHHHHHHHHhcCCCcHHHHHH
Q psy12719 24 HSNV-VEACTLFAQVLVDQEDFDGAEEYFNRSIRVDPENASLYVHRAMLMLQARGNVDEAIKLIEKAISIDKSCMFAYET 102 (116)
Q Consensus 24 ~~~~-~~~~~~~~~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~ 102 (116)
+|.. ..++..+|.++...|++++|+..+++++...|.+..++..+|.++.. .|++++|+..+++++...|.++.++..
T Consensus 4 ~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~la~~~~~-~~~~~~A~~~~~~~~~~~~~~~~~~~~ 82 (125)
T 1na0_A 4 DPGNSAEAWYNLGNAYYKQGDYDEAIEYYQKALELDPNNAEAWYNLGNAYYK-QGDYDEAIEYYQKALELDPNNAEAWYN 82 (125)
T ss_dssp ---CHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHH-TTCHHHHHHHHHHHHHHCTTCHHHHHH
T ss_pred CccccHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHCcCcHHHHHHHHHHHHH-hCCHHHHHHHHHHHHHhCCccHHHHHH
Confidence 4544 77899999999999999999999999999999999999999999887 899999999999999999999999999
Q ss_pred HHHHHHhhcccccC
Q psy12719 103 LGTIEVQRTFVVLW 116 (116)
Q Consensus 103 l~~~~~~~~~~~~a 116 (116)
++.++...|++++|
T Consensus 83 la~~~~~~~~~~~A 96 (125)
T 1na0_A 83 LGNAYYKQGDYDEA 96 (125)
T ss_dssp HHHHHHHTTCHHHH
T ss_pred HHHHHHHhcCHHHH
Confidence 99999999988764
No 130
>2qfc_A PLCR protein; TPR, HTH, transcription regulation; 2.60A {Bacillus thuringiensis serovar ISRAELE35646}
Probab=99.69 E-value=5e-16 Score=90.90 Aligned_cols=112 Identities=12% Similarity=0.111 Sum_probs=93.6
Q ss_pred ccchhcHHHHHHHHHHHHhhCCCh------hHHHHHHHHHHHhhcChhhHHHHHHHHh---ccCCCCH----HHHHHHHH
Q psy12719 4 PGDRERVEQSLKEFRNFVDTHSNV------VEACTLFAQVLVDQEDFDGAEEYFNRSI---RVDPENA----SLYVHRAM 70 (116)
Q Consensus 4 ~~~~~~~~~A~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~A~~~~~~a~---~~~~~~~----~~~~~~~~ 70 (116)
+...|++++|+..+.+++...+.. ..++..+|.++...|++++|+.+|++++ ...|.+. .+++++|.
T Consensus 125 ~~~~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~lg~~y~~~~~~~~A~~~~~kal~~~~~~~~~~~~~~~~~~nlg~ 204 (293)
T 2qfc_A 125 VLKKVDYEYCILELKKLLNQQLTGIDVYQNLYIENAIANIYAENGYLKKGIDLFEQILKQLEALHDNEEFDVKVRYNHAK 204 (293)
T ss_dssp HHTSSCHHHHHHHHHHHHTTCCCSSCTTHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHSCCCHHHHHHHHHHHHH
T ss_pred HhcCCCHHHHHHHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHhcCccccchHHHHHhHHH
Confidence 345679999999999999765433 5588999999999999999999999998 4455542 68999999
Q ss_pred HHHHhcCCHHHHHHHHHHHHhcCCC------cHHHHHHHHHHHHhhcccccC
Q psy12719 71 LMLQARGNVDEAIKLIEKAISIDKS------CMFAYETLGTIEVQRTFVVLW 116 (116)
Q Consensus 71 ~~~~~~~~~~~a~~~~~~~~~~~~~------~~~~~~~l~~~~~~~~~~~~a 116 (116)
++.. +|++++|+..+++++...+. ...++..+|.++..+|++++|
T Consensus 205 ~y~~-~~~y~~Al~~~~kal~~~~~~~~~~~~~~~~~~lg~~y~~~g~~~~A 255 (293)
T 2qfc_A 205 ALYL-DSRYEESLYQVNKAIEISCRINSMALIGQLYYQRGECLRKLEYEEAE 255 (293)
T ss_dssp HHHH-TTCHHHHHHHHHHHHHHHHHTTBCSSHHHHHHHHHHHHHHTTCCHHH
T ss_pred HHHH-HhhHHHHHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHHcCCcHHH
Confidence 9888 89999999999999987543 267899999999999998764
No 131
>1elr_A TPR2A-domain of HOP; HOP, TPR-domain, peptide-complex, helical repeat, protein binding, chaperone; 1.90A {Homo sapiens} SCOP: a.118.8.1 PDB: 3esk_A 3fwv_A
Probab=99.69 E-value=2.3e-16 Score=81.58 Aligned_cols=91 Identities=19% Similarity=0.281 Sum_probs=84.1
Q ss_pred CChhHHHHHHHHHHHhhcChhhHHHHHHHHhccCCCCHHHHHHHHHHHHHhcCCHHHHHHHHHHHHhcCCCc-------H
Q psy12719 25 SNVVEACTLFAQVLVDQEDFDGAEEYFNRSIRVDPENASLYVHRAMLMLQARGNVDEAIKLIEKAISIDKSC-------M 97 (116)
Q Consensus 25 ~~~~~~~~~~~~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~-------~ 97 (116)
|..+..+..+|.++...|++++|+..+.+++..+|.++.+++.+|.++.. .|++++|+..+.+++...|.+ +
T Consensus 1 ~~~~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~la~~~~~-~~~~~~A~~~~~~~~~~~~~~~~~~~~~~ 79 (131)
T 1elr_A 1 GKQALKEKELGNDAYKKKDFDTALKHYDKAKELDPTNMTYITNQAAVYFE-KGDYNKCRELCEKAIEVGRENREDYRQIA 79 (131)
T ss_dssp CHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHH-HTCHHHHHHHHHHHHHHHHHSTTCHHHHH
T ss_pred ChHHHHHHHHHHHHHHhcCHHHHHHHHHHHHhcCCccHHHHHHHHHHHHH-hccHHHHHHHHHHHHhhccccchhHHHHH
Confidence 34567889999999999999999999999999999999999999999887 899999999999999998876 8
Q ss_pred HHHHHHHHHHHhhcccccC
Q psy12719 98 FAYETLGTIEVQRTFVVLW 116 (116)
Q Consensus 98 ~~~~~l~~~~~~~~~~~~a 116 (116)
.++..+|.++...|++++|
T Consensus 80 ~~~~~la~~~~~~~~~~~A 98 (131)
T 1elr_A 80 KAYARIGNSYFKEEKYKDA 98 (131)
T ss_dssp HHHHHHHHHHHHTTCHHHH
T ss_pred HHHHHHHHHHHHhccHHHH
Confidence 8999999999999998764
No 132
>2fo7_A Synthetic consensus TPR protein; tetratricopeptide repeat, consensus protein, superhelix, de novo protein; 2.30A {Synthetic} SCOP: k.38.1.1 PDB: 2hyz_A
Probab=99.68 E-value=1e-15 Score=79.32 Aligned_cols=91 Identities=21% Similarity=0.400 Sum_probs=86.0
Q ss_pred ccchhcHHHHHHHHHHHHhhCCChhHHHHHHHHHHHhhcChhhHHHHHHHHhccCCCCHHHHHHHHHHHHHhcCCHHHHH
Q psy12719 4 PGDRERVEQSLKEFRNFVDTHSNVVEACTLFAQVLVDQEDFDGAEEYFNRSIRVDPENASLYVHRAMLMLQARGNVDEAI 83 (116)
Q Consensus 4 ~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~a~ 83 (116)
+...|++++|+..+++++...|.+..++..+|.++...|++++|+..+++++...|.+..++..+|.++.. .|++++|.
T Consensus 45 ~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~la~~~~~-~~~~~~A~ 123 (136)
T 2fo7_A 45 YYKQGDYDEAIEYYQKALELDPRSAEAWYNLGNAYYKQGDYDEAIEYYQKALELDPRSAEAWYNLGNAYYK-QGDYDEAI 123 (136)
T ss_dssp HHHHTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHT-TTCHHHHH
T ss_pred HHHhcCHHHHHHHHHHHHHHCCCchHHHHHHHHHHHHhcCHHHHHHHHHHHHHhCCCChHHHHHHHHHHHH-HccHHHHH
Confidence 45678999999999999999999999999999999999999999999999999999999999999999877 89999999
Q ss_pred HHHHHHHhcCCC
Q psy12719 84 KLIEKAISIDKS 95 (116)
Q Consensus 84 ~~~~~~~~~~~~ 95 (116)
..+.+++..+|+
T Consensus 124 ~~~~~~~~~~~~ 135 (136)
T 2fo7_A 124 EYYQKALELDPR 135 (136)
T ss_dssp HHHHHHHHHSTT
T ss_pred HHHHHHHccCCC
Confidence 999999998886
No 133
>3ulq_A Response regulator aspartate phosphatase F; tetratricopeptide repeat, response regulator helix-turn-HELX binding, 3-helix bundle; 2.30A {Bacillus subtilis}
Probab=99.68 E-value=1.8e-16 Score=95.58 Aligned_cols=112 Identities=14% Similarity=0.123 Sum_probs=94.9
Q ss_pred ccchhcHHHHHHHHHHHHhhCCC-------hhHHHHHHHHHHHhhcChhhHHHHHHHHhccCCCC------HHHHHHHHH
Q psy12719 4 PGDRERVEQSLKEFRNFVDTHSN-------VVEACTLFAQVLVDQEDFDGAEEYFNRSIRVDPEN------ASLYVHRAM 70 (116)
Q Consensus 4 ~~~~~~~~~A~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~A~~~~~~a~~~~~~~------~~~~~~~~~ 70 (116)
+...|++++|+..+.+++...+. ...++..+|.++...|++++|+.++++++.+.|.. ..++.++|.
T Consensus 153 ~~~~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~lg~ 232 (383)
T 3ulq_A 153 YYYMKQTYFSMDYARQAYEIYKEHEAYNIRLLQCHSLFATNFLDLKQYEDAISHFQKAYSMAEAEKQPQLMGRTLYNIGL 232 (383)
T ss_dssp HHHTTCHHHHHHHHHHHHHHHHTCSTTHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred HHHcCCHHHHHHHHHHHHHHHHhCccchHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHcCChHHHHHHHHHHHH
Confidence 45678999999999999987543 34588899999999999999999999999875533 357899999
Q ss_pred HHHHhcCCHHHHHHHHHHHHh-----cC-CCcHHHHHHHHHHHHhhcccccC
Q psy12719 71 LMLQARGNVDEAIKLIEKAIS-----ID-KSCMFAYETLGTIEVQRTFVVLW 116 (116)
Q Consensus 71 ~~~~~~~~~~~a~~~~~~~~~-----~~-~~~~~~~~~l~~~~~~~~~~~~a 116 (116)
++.. .|++++|+..+++++. .+ |..+.++..+|.++..+|++++|
T Consensus 233 ~y~~-~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A 283 (383)
T 3ulq_A 233 CKNS-QSQYEDAIPYFKRAIAVFEESNILPSLPQAYFLITQIHYKLGKIDKA 283 (383)
T ss_dssp HHHH-TTCHHHHHHHHHHHHHHHHHTTCGGGHHHHHHHHHHHHHHTTCHHHH
T ss_pred HHHH-CCCHHHHHHHHHHHHHHHHhhccchhHHHHHHHHHHHHHHCCCHHHH
Confidence 9887 8999999999999998 46 77788999999999999998764
No 134
>3nf1_A KLC 1, kinesin light chain 1; TPR, structural genomics consortium (SGC), motor PR transport protein; 2.80A {Homo sapiens}
Probab=99.68 E-value=1.8e-16 Score=92.50 Aligned_cols=113 Identities=16% Similarity=0.262 Sum_probs=99.8
Q ss_pred cccchhcHHHHHHHHHHHHhhC--------CChhHHHHHHHHHHHhhcChhhHHHHHHHHhcc--------CCCCHHHHH
Q psy12719 3 VPGDRERVEQSLKEFRNFVDTH--------SNVVEACTLFAQVLVDQEDFDGAEEYFNRSIRV--------DPENASLYV 66 (116)
Q Consensus 3 ~~~~~~~~~~A~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~A~~~~~~a~~~--------~~~~~~~~~ 66 (116)
++...|++++|+..+++++... |....++..+|.++...|++++|+.++++++.. .|....++.
T Consensus 120 ~~~~~g~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~~~la~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~~ 199 (311)
T 3nf1_A 120 LYGKRGKYKEAEPLCKRALEIREKVLGKDHPDVAKQLNNLALLCQNQGKYEEVEYYYQRALEIYQTKLGPDDPNVAKTKN 199 (311)
T ss_dssp HHHTTTCHHHHHHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHHHHTSCTTCHHHHHHHH
T ss_pred HHHHcCcHHHHHHHHHHHHHHHHHhcCCCChHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHhCCCCHHHHHHHH
Confidence 3567899999999999999874 556778999999999999999999999999987 666778899
Q ss_pred HHHHHHHHhcCCHHHHHHHHHHHHhc-------------------------------------------------CCCcH
Q psy12719 67 HRAMLMLQARGNVDEAIKLIEKAISI-------------------------------------------------DKSCM 97 (116)
Q Consensus 67 ~~~~~~~~~~~~~~~a~~~~~~~~~~-------------------------------------------------~~~~~ 97 (116)
.+|.++.. .|++++|+..+++++.. .|..+
T Consensus 200 ~la~~~~~-~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~ 278 (311)
T 3nf1_A 200 NLASCYLK-QGKFKQAETLYKEILTRAHEREFGSVDDENKPIWMHAEEREECKGKQKDGTSFGEYGGWYKACKVDSPTVT 278 (311)
T ss_dssp HHHHHHHH-HTCHHHHHHHHHHHHHHHHHHHHC------CCHHHHHHHHHHC-------CCSCCCC---------CHHHH
T ss_pred HHHHHHHH-cCCHHHHHHHHHHHHHHHHHhcCCCCCcchHHHHHHHHHHHHhcCchhhHHHHHHHHHHHhhcCCCCchHH
Confidence 99999888 89999999999999974 46667
Q ss_pred HHHHHHHHHHHhhcccccC
Q psy12719 98 FAYETLGTIEVQRTFVVLW 116 (116)
Q Consensus 98 ~~~~~l~~~~~~~~~~~~a 116 (116)
.++..+|.++...|++++|
T Consensus 279 ~~~~~la~~~~~~g~~~~A 297 (311)
T 3nf1_A 279 TTLKNLGALYRRQGKFEAA 297 (311)
T ss_dssp HHHHHHHHHHHHHTCHHHH
T ss_pred HHHHHHHHHHHHCCCHHHH
Confidence 8899999999999998864
No 135
>1a17_A Serine/threonine protein phosphatase 5; hydrolase, protein-protein interactions, TPR, S helix; 2.45A {Homo sapiens} SCOP: a.118.8.1 PDB: 2bug_A
Probab=99.68 E-value=1.1e-15 Score=82.15 Aligned_cols=88 Identities=19% Similarity=0.266 Sum_probs=83.8
Q ss_pred hHHHHHHHHHHHhhcChhhHHHHHHHHhccCCCCHHHHHHHHHHHHHhcCCHHHHHHHHHHHHhcCCCcHHHHHHHHHHH
Q psy12719 28 VEACTLFAQVLVDQEDFDGAEEYFNRSIRVDPENASLYVHRAMLMLQARGNVDEAIKLIEKAISIDKSCMFAYETLGTIE 107 (116)
Q Consensus 28 ~~~~~~~~~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~l~~~~ 107 (116)
+..+..+|..+...|++++|+..|++++..+|.++.++..+|.++.. .|++++|+..+.+++..+|.++.++..+|.++
T Consensus 13 ~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~~a~~~~~-~~~~~~A~~~~~~a~~~~~~~~~~~~~~a~~~ 91 (166)
T 1a17_A 13 AEELKTQANDYFKAKDYENAIKFYSQAIELNPSNAIYYGNRSLAYLR-TECYGYALGDATRAIELDKKYIKGYYRRAASN 91 (166)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSTTCHHHHHHHHHHHHH-TTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCChHHHHHHHHHHHH-cCCHHHHHHHHHHHHHhCcccHHHHHHHHHHH
Confidence 56789999999999999999999999999999999999999999887 89999999999999999999999999999999
Q ss_pred HhhcccccC
Q psy12719 108 VQRTFVVLW 116 (116)
Q Consensus 108 ~~~~~~~~a 116 (116)
...|++++|
T Consensus 92 ~~~~~~~~A 100 (166)
T 1a17_A 92 MALGKFRAA 100 (166)
T ss_dssp HHTTCHHHH
T ss_pred HHhccHHHH
Confidence 999998764
No 136
>3u3w_A Transcriptional activator PLCR protein; ternary complex, PLCR-PAPR7-DNA, HTH DNA-binding domain, QUO sensing; 2.40A {Bacillus thuringiensis} PDB: 2qfc_A
Probab=99.67 E-value=3.6e-16 Score=91.51 Aligned_cols=112 Identities=11% Similarity=0.120 Sum_probs=91.2
Q ss_pred ccchhcHHHHHHHHHHHHhhCCCh------hHHHHHHHHHHHhhcChhhHHHHHHHHhcc-------CCCCHHHHHHHHH
Q psy12719 4 PGDRERVEQSLKEFRNFVDTHSNV------VEACTLFAQVLVDQEDFDGAEEYFNRSIRV-------DPENASLYVHRAM 70 (116)
Q Consensus 4 ~~~~~~~~~A~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~A~~~~~~a~~~-------~~~~~~~~~~~~~ 70 (116)
+...+++++|+..+++++...+.. ..++..+|.++...|++++|+.+|++++.. .+....+++++|.
T Consensus 125 ~~~~~~~~~Ai~~~~~al~~~~~~~~~~~~~~~~~~lg~~y~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~nlg~ 204 (293)
T 3u3w_A 125 VLKKVDYEYCILELKKLLNQQLTGIDVYQNLYIENAIANIYAENGYLKKGIDLFEQILKQLEALHDNEEFDVKVRYNHAK 204 (293)
T ss_dssp HTTSSCHHHHHHHHHHHHHTCCCCSCTTHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHSSCCHHHHHHHHHHHHH
T ss_pred HHcccCHHHHHHHHHHHHHHhcccccHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHhcccchhHHHHHHHHHHH
Confidence 345678999999999999865443 237899999999999999999999999942 2233568899999
Q ss_pred HHHHhcCCHHHHHHHHHHHHhcCCCc------HHHHHHHHHHHHhhcc-cccC
Q psy12719 71 LMLQARGNVDEAIKLIEKAISIDKSC------MFAYETLGTIEVQRTF-VVLW 116 (116)
Q Consensus 71 ~~~~~~~~~~~a~~~~~~~~~~~~~~------~~~~~~l~~~~~~~~~-~~~a 116 (116)
++.. +|++++|+..++++++..+.. ..++..+|.++..+|+ +++|
T Consensus 205 ~y~~-~~~y~~A~~~~~~al~~~~~~~~~~~~~~~~~~lg~~~~~~g~~~~~A 256 (293)
T 3u3w_A 205 ALYL-DSRYEESLYQVNKAIEISCRINSMALIGQLYYQRGECLRKLEYEEAEI 256 (293)
T ss_dssp HHHH-TTCHHHHHHHHHHHHHHHHHTTBCTTHHHHHHHHHHHHHHTTCCHHHH
T ss_pred HHHH-HhHHHHHHHHHHHHHHHHHHcCcHHHHHHHHHHHHHHHHHhCCcHHHH
Confidence 9888 899999999999999875433 7889999999999995 3543
No 137
>3nf1_A KLC 1, kinesin light chain 1; TPR, structural genomics consortium (SGC), motor PR transport protein; 2.80A {Homo sapiens}
Probab=99.66 E-value=2.1e-16 Score=92.26 Aligned_cols=112 Identities=15% Similarity=0.215 Sum_probs=99.3
Q ss_pred ccchhcHHHHHHHHHHHHhh--------CCChhHHHHHHHHHHHhhcChhhHHHHHHHHhccC--------CCCHHHHHH
Q psy12719 4 PGDRERVEQSLKEFRNFVDT--------HSNVVEACTLFAQVLVDQEDFDGAEEYFNRSIRVD--------PENASLYVH 67 (116)
Q Consensus 4 ~~~~~~~~~A~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~a~~~~--------~~~~~~~~~ 67 (116)
+...|++++|+..+++++.. .|....++..+|.++...|++++|+.++++++... |....++..
T Consensus 79 ~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~~~ 158 (311)
T 3nf1_A 79 YRDQNKYKDAANLLNDALAIREKTLGKDHPAVAATLNNLAVLYGKRGKYKEAEPLCKRALEIREKVLGKDHPDVAKQLNN 158 (311)
T ss_dssp HHHTTCHHHHHHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHHHHHHCTTCHHHHHHHHH
T ss_pred HHHCCCHHHHHHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHHHHcCcHHHHHHHHHHHHHHHHHhcCCCChHHHHHHHH
Confidence 45679999999999999987 35667899999999999999999999999999874 555778999
Q ss_pred HHHHHHHhcCCHHHHHHHHHHHHhc--------CCCcHHHHHHHHHHHHhhcccccC
Q psy12719 68 RAMLMLQARGNVDEAIKLIEKAISI--------DKSCMFAYETLGTIEVQRTFVVLW 116 (116)
Q Consensus 68 ~~~~~~~~~~~~~~a~~~~~~~~~~--------~~~~~~~~~~l~~~~~~~~~~~~a 116 (116)
+|.++.. .|++++|++.+++++.. .|....++..+|.++...|++++|
T Consensus 159 la~~~~~-~~~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A 214 (311)
T 3nf1_A 159 LALLCQN-QGKYEEVEYYYQRALEIYQTKLGPDDPNVAKTKNNLASCYLKQGKFKQA 214 (311)
T ss_dssp HHHHHHT-TTCHHHHHHHHHHHHHHHHHTSCTTCHHHHHHHHHHHHHHHHHTCHHHH
T ss_pred HHHHHHH-cCCHHHHHHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHcCCHHHH
Confidence 9999877 89999999999999998 677788999999999999998764
No 138
>4g1t_A Interferon-induced protein with tetratricopeptide 2; ISG, all alpha helix, antivirus, antiviral protein; 2.80A {Homo sapiens}
Probab=99.66 E-value=2.8e-15 Score=92.21 Aligned_cols=111 Identities=14% Similarity=0.056 Sum_probs=93.1
Q ss_pred cccchhcHHHHHHHHHHHHhh---------CCChhHHHHHHHHHHHhhcChhhHHHHHHHHhccC--------CCCHHHH
Q psy12719 3 VPGDRERVEQSLKEFRNFVDT---------HSNVVEACTLFAQVLVDQEDFDGAEEYFNRSIRVD--------PENASLY 65 (116)
Q Consensus 3 ~~~~~~~~~~A~~~~~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~a~~~~--------~~~~~~~ 65 (116)
++...|++++|++.|++++++ +|....++.++|.+|...|++++|+.++++++.+. +..+.++
T Consensus 60 ~~~~~G~~~eAl~~~~kAl~~~~~~~~~~~~~~~~~~~~nla~~y~~~g~~~~A~~~~~ka~~i~~~~~~~~~~~~~~~~ 139 (472)
T 4g1t_A 60 LKHLKGQNEAALECLRKAEELIQQEHADQAEIRSLVTWGNYAWVYYHMGRLSDVQIYVDKVKHVCEKFSSPYRIESPELD 139 (472)
T ss_dssp HHHHTTCHHHHHHHHHHHHHHHHHHSGGGCTTTTHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHSCCSSCCCCHHHH
T ss_pred HHHHCCCHHHHHHHHHHHHHHHHhcCccccchHHHHHHHHHHHHHHHcCChHHHHHHHHHHHHHhHhcccccchhhHHHH
Confidence 345679999999999999876 45566789999999999999999999999998763 3557788
Q ss_pred HHHHHHHHHh-cCCHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHhhccc
Q psy12719 66 VHRAMLMLQA-RGNVDEAIKLIEKAISIDKSCMFAYETLGTIEVQRTFV 113 (116)
Q Consensus 66 ~~~~~~~~~~-~~~~~~a~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ 113 (116)
..+|.++... .+++++|++.|+++++.+|+++.++..++.++...+++
T Consensus 140 ~~~g~~~~~~~~~~y~~A~~~~~kal~~~p~~~~~~~~~~~~~~~l~~~ 188 (472)
T 4g1t_A 140 CEEGWTRLKCGGNQNERAKVCFEKALEKKPKNPEFTSGLAIASYRLDNW 188 (472)
T ss_dssp HHHHHHHHHHCTTHHHHHHHHHHHHHHHSTTCHHHHHHHHHHHHHHHHS
T ss_pred HHHHHHHHHHccccHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHhcCc
Confidence 8888876652 35799999999999999999999999999987766554
No 139
>4a1s_A PINS, partner of inscuteable; cell cycle, LGN, mitotic spindle orientation, asymmetric CEL divisions; 2.10A {Drosophila melanogaster}
Probab=99.64 E-value=8e-16 Score=93.14 Aligned_cols=108 Identities=13% Similarity=0.118 Sum_probs=97.4
Q ss_pred ccchhcHHHHHHHHHHHHhhCCChh----HHHHHHHHHHHhhcChhhHHHHHHHHhcc------CCCCHHHHHHHHHHHH
Q psy12719 4 PGDRERVEQSLKEFRNFVDTHSNVV----EACTLFAQVLVDQEDFDGAEEYFNRSIRV------DPENASLYVHRAMLML 73 (116)
Q Consensus 4 ~~~~~~~~~A~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~A~~~~~~a~~~------~~~~~~~~~~~~~~~~ 73 (116)
+...|++++|+..|++++...|++. .++..+|.++...|++++|+.++++++.. .|....++..+|.++.
T Consensus 58 ~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~l~~~~~ 137 (411)
T 4a1s_A 58 LCNAGDCRAGVAFFQAAIQAGTEDLRTLSAIYSQLGNAYFYLGDYNKAMQYHKHDLTLAKSMNDRLGEAKSSGNLGNTLK 137 (411)
T ss_dssp HHHTTCHHHHHHHHHHHHHHCCSCHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHH
T ss_pred HHHhCcHHHHHHHHHHHHHhcccChhHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHccCchHHHHHHHHHHHHHH
Confidence 4567899999999999999999986 58899999999999999999999999987 5666789999999988
Q ss_pred HhcCCHHHHHHHHHHHHhc------CCCcHHHHHHHHHHHHhhcc
Q psy12719 74 QARGNVDEAIKLIEKAISI------DKSCMFAYETLGTIEVQRTF 112 (116)
Q Consensus 74 ~~~~~~~~a~~~~~~~~~~------~~~~~~~~~~l~~~~~~~~~ 112 (116)
. .|++++|+..+.+++.. .|....++..+|.++...|+
T Consensus 138 ~-~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~l~~~~~~~g~ 181 (411)
T 4a1s_A 138 V-MGRFDEAAICCERHLTLARQLGDRLSEGRALYNLGNVYHAKGK 181 (411)
T ss_dssp H-TTCHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHHH
T ss_pred H-CCCHHHHHHHHHHHHHHHHHhhchHHHHHHHHHHHHHHHHcCc
Confidence 7 89999999999999988 45567789999999999998
No 140
>4g1t_A Interferon-induced protein with tetratricopeptide 2; ISG, all alpha helix, antivirus, antiviral protein; 2.80A {Homo sapiens}
Probab=99.64 E-value=1.4e-15 Score=93.48 Aligned_cols=110 Identities=14% Similarity=0.111 Sum_probs=71.0
Q ss_pred chhcHHHHHHHHHHHHhhCCChhHHHHHHHHHHHhhcChhhHHHHHHHHhccCCCCHHHHHHHHHHHHHh----------
Q psy12719 6 DRERVEQSLKEFRNFVDTHSNVVEACTLFAQVLVDQEDFDGAEEYFNRSIRVDPENASLYVHRAMLMLQA---------- 75 (116)
Q Consensus 6 ~~~~~~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~~~---------- 75 (116)
..+++++|+..+++++..+|.++.++..+|.++...|++++|+..+++++..+|+++.++..+|.++...
T Consensus 225 ~~~~~~~a~~~~~~al~~~~~~~~~~~~lg~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~lg~~y~~~~~~~~~~~~~ 304 (472)
T 4g1t_A 225 EGEEEGEGEKLVEEALEKAPGVTDVLRSAAKFYRRKDEPDKAIELLKKALEYIPNNAYLHCQIGCCYRAKVFQVMNLREN 304 (472)
T ss_dssp -----CHHHHHHHHHHHHCSSCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSTTCHHHHHHHHHHHHHHHHHHHHC---
T ss_pred hhhHHHHHHHHHHHHHHhCccHHHHHHHHHHHHHHcCchHHHHHHHHHHHHhCCChHHHHHHHHHHHHHHHHHhhhHHHH
Confidence 4456677777777777777777777777777777777777777777777777777777777776664320
Q ss_pred --------cCCHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHhhccccc
Q psy12719 76 --------RGNVDEAIKLIEKAISIDKSCMFAYETLGTIEVQRTFVVL 115 (116)
Q Consensus 76 --------~~~~~~a~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~ 115 (116)
.+.+++|+..+.+++..+|....++..+|.++...|++++
T Consensus 305 ~~~~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~lg~~~~~~~~~~~ 352 (472)
T 4g1t_A 305 GMYGKRKLLELIGHAVAHLKKADEANDNLFRVCSILASLHALADQYEE 352 (472)
T ss_dssp ---CHHHHHHHHHHHHHHHHHHHHHCTTTCCCHHHHHHHHHHTTCHHH
T ss_pred HHHHHHHHHhhHHHHHHHHHHHhhcCCchhhhhhhHHHHHHHhccHHH
Confidence 1234556666666666666666666666666666666554
No 141
>3ulq_A Response regulator aspartate phosphatase F; tetratricopeptide repeat, response regulator helix-turn-HELX binding, 3-helix bundle; 2.30A {Bacillus subtilis}
Probab=99.64 E-value=3.1e-16 Score=94.59 Aligned_cols=112 Identities=13% Similarity=0.023 Sum_probs=95.3
Q ss_pred ccchhcHHHHHHHHHHHHhhC---C---ChhHHHHHHHHHHHhhcChhhHHHHHHHHhccCCCC-------HHHHHHHHH
Q psy12719 4 PGDRERVEQSLKEFRNFVDTH---S---NVVEACTLFAQVLVDQEDFDGAEEYFNRSIRVDPEN-------ASLYVHRAM 70 (116)
Q Consensus 4 ~~~~~~~~~A~~~~~~~~~~~---~---~~~~~~~~~~~~~~~~~~~~~A~~~~~~a~~~~~~~-------~~~~~~~~~ 70 (116)
+...|++++|+..+++++... + ..+.++..+|.++...|++++|+.++.+++.+.+.. ..++..+|.
T Consensus 113 ~~~~g~~~~A~~~~~~al~~~~~~~~~~~~a~~~~~lg~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~lg~ 192 (383)
T 3ulq_A 113 ELDQREYLSAIKFFKKAESKLIFVKDRIEKAEFFFKMSESYYYMKQTYFSMDYARQAYEIYKEHEAYNIRLLQCHSLFAT 192 (383)
T ss_dssp HHHTTCHHHHHHHHHHHHTTGGGCCCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHTCSTTHHHHHHHHHHHHH
T ss_pred HHHhcCHHHHHHHHHHHHHHHhhCCCHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHhCccchHHHHHHHHHHHH
Confidence 456799999999999999872 2 246789999999999999999999999999874433 458999999
Q ss_pred HHHHhcCCHHHHHHHHHHHHhcCCCc------HHHHHHHHHHHHhhcccccC
Q psy12719 71 LMLQARGNVDEAIKLIEKAISIDKSC------MFAYETLGTIEVQRTFVVLW 116 (116)
Q Consensus 71 ~~~~~~~~~~~a~~~~~~~~~~~~~~------~~~~~~l~~~~~~~~~~~~a 116 (116)
++.. .|++++|+..+.+++...+.. ..++.++|.++..+|++++|
T Consensus 193 ~~~~-~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~lg~~y~~~g~~~~A 243 (383)
T 3ulq_A 193 NFLD-LKQYEDAISHFQKAYSMAEAEKQPQLMGRTLYNIGLCKNSQSQYEDA 243 (383)
T ss_dssp HHHH-TTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHH
T ss_pred HHHH-hcCHHHHHHHHHHHHHHHHHcCChHHHHHHHHHHHHHHHHCCCHHHH
Confidence 9887 899999999999999875433 35899999999999998764
No 142
>3ro3_A PINS homolog, G-protein-signaling modulator 2; asymmetric cell division, protein binding; 1.10A {Mus musculus}
Probab=99.63 E-value=6.7e-16 Score=82.33 Aligned_cols=112 Identities=12% Similarity=0.006 Sum_probs=94.5
Q ss_pred ccchhcHHHHHHHHHHHHhhCCChh------HHHHHHHHHHHhhcChhhHHHHHHHHhccCCCC------HHHHHHHHHH
Q psy12719 4 PGDRERVEQSLKEFRNFVDTHSNVV------EACTLFAQVLVDQEDFDGAEEYFNRSIRVDPEN------ASLYVHRAML 71 (116)
Q Consensus 4 ~~~~~~~~~A~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~A~~~~~~a~~~~~~~------~~~~~~~~~~ 71 (116)
+...|++++|+..+.+++...+... .++..+|.++...|++++|+..+++++...+.. ..++..+|.+
T Consensus 19 ~~~~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~l~~~ 98 (164)
T 3ro3_A 19 HYLLGNFRDAVIAHEQRLLIAKEFGDKAAERIAYSNLGNAYIFLGEFETASEYYKKTLLLARQLKDRAVEAQSCYSLGNT 98 (164)
T ss_dssp HHHTTCHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred HHHhcCHHHHHHHHHHHHHHHHHhCCchHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhCCcHHHHHHHHHHHHH
Confidence 4567899999999999998875543 488899999999999999999999999876543 5678999999
Q ss_pred HHHhcCCHHHHHHHHHHHHhcCC------CcHHHHHHHHHHHHhhcccccC
Q psy12719 72 MLQARGNVDEAIKLIEKAISIDK------SCMFAYETLGTIEVQRTFVVLW 116 (116)
Q Consensus 72 ~~~~~~~~~~a~~~~~~~~~~~~------~~~~~~~~l~~~~~~~~~~~~a 116 (116)
+.. .|++++|+..+++++...+ ....++..++.++...|++++|
T Consensus 99 ~~~-~~~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A 148 (164)
T 3ro3_A 99 YTL-LQDYEKAIDYHLKHLAIAQELKDRIGEGRACWSLGNAYTALGNHDQA 148 (164)
T ss_dssp HHH-TTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHTCHHHH
T ss_pred HHH-HhhHHHHHHHHHHHHHHHHHccchHhHHHHHHHHHHHHHHccCHHHH
Confidence 887 8999999999999997733 2256788999999999998764
No 143
>2l6j_A TPR repeat-containing protein associated with HSP; tetratricopeptide repeat (TPR), HSP90 CO-factor, protein BIN; NMR {Saccharomyces cerevisiae}
Probab=99.63 E-value=8.8e-17 Score=81.36 Aligned_cols=83 Identities=8% Similarity=0.112 Sum_probs=74.6
Q ss_pred ccchhcHHHHHHHHHHHHhhCCChhHHHHHHHHHHHhhcChhhHHHHHHHHhccCCCC------HHHHHHHHHHHHHhcC
Q psy12719 4 PGDRERVEQSLKEFRNFVDTHSNVVEACTLFAQVLVDQEDFDGAEEYFNRSIRVDPEN------ASLYVHRAMLMLQARG 77 (116)
Q Consensus 4 ~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~a~~~~~~~------~~~~~~~~~~~~~~~~ 77 (116)
+...|++++|+..|++++..+|.++.++..+|.++...|++++|+..+++++..+|++ ..+++.+|.++.. .|
T Consensus 14 ~~~~~~~~~A~~~~~~al~~~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~~~~~~~~-~~ 92 (111)
T 2l6j_A 14 LFKQGLYREAVHCYDQLITAQPQNPVGYSNKAMALIKLGEYTQAIQMCQQGLRYTSTAEHVAIRSKLQYRLELAQGA-VG 92 (111)
T ss_dssp HHTTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHTSCSSTTSHHHHHHHHHHHHHHHHH-HH
T ss_pred HHHcCCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHhcCHHHHHHHHHHHHHhCCCccHHHHHHHHHHHHHHHHHH-HH
Confidence 4578999999999999999999999999999999999999999999999999999998 8889999999776 77
Q ss_pred CHHHHHHHHH
Q psy12719 78 NVDEAIKLIE 87 (116)
Q Consensus 78 ~~~~a~~~~~ 87 (116)
+++.|+..++
T Consensus 93 ~~~~a~~~~~ 102 (111)
T 2l6j_A 93 SVQIPVVEVD 102 (111)
T ss_dssp CCCCCSSSSS
T ss_pred hHhhhHhHHH
Confidence 7766655443
No 144
>3k9i_A BH0479 protein; putative protein binding protein, structural genomics, joint for structural genomics, JCSG; 2.71A {Bacillus halodurans}
Probab=99.63 E-value=3.7e-16 Score=80.20 Aligned_cols=76 Identities=9% Similarity=-0.044 Sum_probs=67.7
Q ss_pred hhcChhhHHHHHHHHhcc---CCCCHHHHHHHHHHHHHhcCCHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHhhcccccC
Q psy12719 40 DQEDFDGAEEYFNRSIRV---DPENASLYVHRAMLMLQARGNVDEAIKLIEKAISIDKSCMFAYETLGTIEVQRTFVVLW 116 (116)
Q Consensus 40 ~~~~~~~A~~~~~~a~~~---~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~a 116 (116)
..|++++|+..|++++.. +|.++.+++.+|.++.. .|++++|+..++++++.+|+++.++..+|.++...|++++|
T Consensus 2 ~~g~~~~A~~~~~~al~~~~~~p~~~~~~~~lg~~~~~-~~~~~~A~~~~~~al~~~p~~~~~~~~l~~~~~~~g~~~~A 80 (117)
T 3k9i_A 2 VLGLEAQAVPYYEKAIASGLQGKDLAECYLGLGSTFRT-LGEYRKAEAVLANGVKQFPNHQALRVFYAMVLYNLGRYEQG 80 (117)
T ss_dssp -----CCCHHHHHHHHSSCCCHHHHHHHHHHHHHHHHH-TTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHTCHHHH
T ss_pred CCCcHHHHHHHHHHHHHcCCCCccHHHHHHHHHHHHHH-cCCHHHHHHHHHHHHHhCCCchHHHHHHHHHHHHcCCHHHH
Confidence 468999999999999999 68889999999999888 99999999999999999999999999999999999998764
No 145
>2ooe_A Cleavage stimulation factor 77 kDa subunit; HAT domain, structural protein; 3.00A {Mus musculus} SCOP: a.118.8.7
Probab=99.62 E-value=5.6e-15 Score=92.50 Aligned_cols=111 Identities=9% Similarity=0.006 Sum_probs=90.4
Q ss_pred cchhcHHHHHHHHHHHHhhCCChh-HHHHHHHHHHHhhcChhhHHHHHHHHhccCCCCHHHHHHHHHHHHHhcCCHHHHH
Q psy12719 5 GDRERVEQSLKEFRNFVDTHSNVV-EACTLFAQVLVDQEDFDGAEEYFNRSIRVDPENASLYVHRAMLMLQARGNVDEAI 83 (116)
Q Consensus 5 ~~~~~~~~A~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~a~ 83 (116)
...|++++|...|++++...|.++ .+|..++.++.+.|++++|+..|++++...|.....+...+.+.+...|++++|.
T Consensus 332 ~~~g~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~Al~~~~~~~~~~~~~a~~~~~~~~~~~~A~ 411 (530)
T 2ooe_A 332 ESRMKYEKVHSIYNRLLAIEDIDPTLVYIQYMKFARRAEGIKSGRMIFKKAREDARTRHHVYVTAALMEYYCSKDKSVAF 411 (530)
T ss_dssp HHTTCHHHHHHHHHHHHHSSSSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCTTCCTHHHHHHHHHHHHHTCCHHHHH
T ss_pred HhcCCHHHHHHHHHHHhCccccCchHHHHHHHHHHHHhcCHHHHHHHHHHHHhccCCchHHHHHHHHHHHHHcCChhHHH
Confidence 356788888888888888888774 5888888888888888888888888888888777777666665433378999999
Q ss_pred HHHHHHHhcCCCcHHHHHHHHHHHHhhccccc
Q psy12719 84 KLIEKAISIDKSCMFAYETLGTIEVQRTFVVL 115 (116)
Q Consensus 84 ~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~ 115 (116)
..|+++++.+|+++.+|..++.++...|+.++
T Consensus 412 ~~~e~al~~~p~~~~~~~~~~~~~~~~g~~~~ 443 (530)
T 2ooe_A 412 KIFELGLKKYGDIPEYVLAYIDYLSHLNEDNN 443 (530)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHTTTTCHHH
T ss_pred HHHHHHHHHCCCCHHHHHHHHHHHHhCCCHhh
Confidence 99999999999888899999988888887764
No 146
>1ouv_A Conserved hypothetical secreted protein; TPR repeat, HCP repeat, cysteine rich protein, loop-helix-TU repeat protein, hydrolase; 2.00A {Helicobacter pylori} SCOP: a.118.18.1
Probab=99.62 E-value=1.9e-14 Score=83.16 Aligned_cols=105 Identities=13% Similarity=0.161 Sum_probs=71.8
Q ss_pred cchhcHHHHHHHHHHHHhhCCChhHHHHHHHHHHHh----hcChhhHHHHHHHHhccCCCCHHHHHHHHHHHHHh---cC
Q psy12719 5 GDRERVEQSLKEFRNFVDTHSNVVEACTLFAQVLVD----QEDFDGAEEYFNRSIRVDPENASLYVHRAMLMLQA---RG 77 (116)
Q Consensus 5 ~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~~~---~~ 77 (116)
...|++++|+.+|+++++ |+++.++..+|.++.. .+++++|+.+|+++++.+ ++.+++.+|.++... .+
T Consensus 17 ~~~~~~~~A~~~~~~a~~--~~~~~a~~~lg~~~~~g~~~~~~~~~A~~~~~~a~~~~--~~~a~~~lg~~~~~g~~~~~ 92 (273)
T 1ouv_A 17 YKEKDFTQAKKYFEKACD--LKENSGCFNLGVLYYQGQGVEKNLKKAASFYAKACDLN--YSNGCHLLGNLYYSGQGVSQ 92 (273)
T ss_dssp HHTTCHHHHHHHHHHHHH--TTCHHHHHHHHHHHHHTSSSCCCHHHHHHHHHHHHHTT--CHHHHHHHHHHHHHTSSSCC
T ss_pred HhCCCHHHHHHHHHHHHH--CCCHHHHHHHHHHHHcCCCcCCCHHHHHHHHHHHHHCC--CHHHHHHHHHHHhCCCCccc
Confidence 445677777777777776 5666677777777777 777777777777777664 666777777774430 47
Q ss_pred CHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHh----hccccc
Q psy12719 78 NVDEAIKLIEKAISIDKSCMFAYETLGTIEVQ----RTFVVL 115 (116)
Q Consensus 78 ~~~~a~~~~~~~~~~~~~~~~~~~~l~~~~~~----~~~~~~ 115 (116)
++++|+..++++++. +++.++..+|.++.. .+++++
T Consensus 93 ~~~~A~~~~~~a~~~--~~~~a~~~lg~~~~~~~~~~~~~~~ 132 (273)
T 1ouv_A 93 NTNKALQYYSKACDL--KYAEGCASLGGIYHDGKVVTRDFKK 132 (273)
T ss_dssp CHHHHHHHHHHHHHT--TCHHHHHHHHHHHHHCSSSCCCHHH
T ss_pred CHHHHHHHHHHHHHc--CCccHHHHHHHHHHcCCCcccCHHH
Confidence 777777777777765 356667777777766 666554
No 147
>3sf4_A G-protein-signaling modulator 2; tetratricopeptide repeat, TPR, cell polarity, asymmetric CEL division, mitotic spindle orientation; 2.60A {Homo sapiens}
Probab=99.62 E-value=9.7e-16 Score=92.27 Aligned_cols=112 Identities=12% Similarity=0.026 Sum_probs=92.1
Q ss_pred ccchhcHHHHHHHHHHHHhhCCChhH------HHHHHHHHHHhhcChhhHHHHHHHHhccCCCC------HHHHHHHHHH
Q psy12719 4 PGDRERVEQSLKEFRNFVDTHSNVVE------ACTLFAQVLVDQEDFDGAEEYFNRSIRVDPEN------ASLYVHRAML 71 (116)
Q Consensus 4 ~~~~~~~~~A~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~A~~~~~~a~~~~~~~------~~~~~~~~~~ 71 (116)
+...|++++|+..+++++...|.... ++..+|.++...|++++|+.++++++...|.. ..++..+|.+
T Consensus 197 ~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~la~~ 276 (406)
T 3sf4_A 197 HYLLGNFRDAVIAHEQRLLIAKEFGDKAAERRAYSNLGNAYIFLGEFETASEYYKKTLLLARQLKDRAVEAQSCYSLGNT 276 (406)
T ss_dssp HHHHTBHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred HHHccCHHHHHHHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHcCChHHHHHHHHHHHHHHHhCcCchHHHHHHHHHHHH
Confidence 45678999999999999887655433 88889999999999999999999998876655 6678889999
Q ss_pred HHHhcCCHHHHHHHHHHHHhcCCCc------HHHHHHHHHHHHhhcccccC
Q psy12719 72 MLQARGNVDEAIKLIEKAISIDKSC------MFAYETLGTIEVQRTFVVLW 116 (116)
Q Consensus 72 ~~~~~~~~~~a~~~~~~~~~~~~~~------~~~~~~l~~~~~~~~~~~~a 116 (116)
+.. .|++++|+..+++++...+.. ..++..+|.++...|++++|
T Consensus 277 ~~~-~g~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A 326 (406)
T 3sf4_A 277 YTL-LQDYEKAIDYHLKHLAIAQELNDRIGEGRACWSLGNAYTALGNHDQA 326 (406)
T ss_dssp HHH-TTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHTCHHHH
T ss_pred HHH-hCcHHHHHHHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHcCCHHHH
Confidence 777 899999999999998875433 66788899999999888764
No 148
>2qfc_A PLCR protein; TPR, HTH, transcription regulation; 2.60A {Bacillus thuringiensis serovar ISRAELE35646}
Probab=99.62 E-value=3.5e-14 Score=83.09 Aligned_cols=112 Identities=8% Similarity=-0.008 Sum_probs=93.9
Q ss_pred ccchhcHHHHHHHHHHHHhhCCChh------HHHHHHHHHHHhhcChhhHHHHHHHHhccCCCC------HHHHHHHHHH
Q psy12719 4 PGDRERVEQSLKEFRNFVDTHSNVV------EACTLFAQVLVDQEDFDGAEEYFNRSIRVDPEN------ASLYVHRAML 71 (116)
Q Consensus 4 ~~~~~~~~~A~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~A~~~~~~a~~~~~~~------~~~~~~~~~~ 71 (116)
+...|++++|++.+.+++...|... ..+..+|.++...|++++|+..+++++...+.. ..++..+|.+
T Consensus 85 ~~~~~~y~~A~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~lg~~ 164 (293)
T 2qfc_A 85 LCKQKRYKEIYNKVWNELKKEEYHPEFQQFLQWQYYVAAYVLKKVDYEYCILELKKLLNQQLTGIDVYQNLYIENAIANI 164 (293)
T ss_dssp HHHTTCHHHHHHHHHHHHHTCCCCHHHHHHHHHHHHHHHHHHTSSCHHHHHHHHHHHHTTCCCSSCTTHHHHHHHHHHHH
T ss_pred HHHhhhHHHHHHHHHHHhccccCChhHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHhcCCchHHHHHHHHHHHHH
Confidence 3467899999999999999877643 346678889999999999999999999865543 5689999999
Q ss_pred HHHhcCCHHHHHHHHHHHH---hcCCCc----HHHHHHHHHHHHhhcccccC
Q psy12719 72 MLQARGNVDEAIKLIEKAI---SIDKSC----MFAYETLGTIEVQRTFVVLW 116 (116)
Q Consensus 72 ~~~~~~~~~~a~~~~~~~~---~~~~~~----~~~~~~l~~~~~~~~~~~~a 116 (116)
+.. .|++++|+..+++++ +..|++ ..++.++|.++..+|++++|
T Consensus 165 y~~-~~~~~~A~~~~~kal~~~~~~~~~~~~~~~~~~nlg~~y~~~~~y~~A 215 (293)
T 2qfc_A 165 YAE-NGYLKKGIDLFEQILKQLEALHDNEEFDVKVRYNHAKALYLDSRYEES 215 (293)
T ss_dssp HHH-TTCHHHHHHHHHHHHHHHHHSCCCHHHHHHHHHHHHHHHHHTTCHHHH
T ss_pred HHH-cCCHHHHHHHHHHHHHHHHhcCccccchHHHHHhHHHHHHHHhhHHHH
Confidence 888 899999999999999 445553 26899999999999999875
No 149
>3gw4_A Uncharacterized protein; structural genomics, PSI-2, protein structure initiative, no structural genomics consortium, NESG, DRR162B; 2.49A {Deinococcus radiodurans R1}
Probab=99.61 E-value=1.7e-15 Score=83.87 Aligned_cols=112 Identities=18% Similarity=0.186 Sum_probs=89.2
Q ss_pred ccchhcHHHHHHHHHHHHh------hCCChhHHHHHHHHHHHhhcChhhHHHHHHHHhcc---CCC----CHHHHHHHHH
Q psy12719 4 PGDRERVEQSLKEFRNFVD------THSNVVEACTLFAQVLVDQEDFDGAEEYFNRSIRV---DPE----NASLYVHRAM 70 (116)
Q Consensus 4 ~~~~~~~~~A~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~a~~~---~~~----~~~~~~~~~~ 70 (116)
+...|++++|+..+++++. ..|....++..+|.++...|++++|+..+++++.. .++ ...++..+|.
T Consensus 36 ~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~lg~ 115 (203)
T 3gw4_A 36 YAFMDRFDEARASFQALQQQAQKSGDHTAEHRALHQVGMVERMAGNWDAARRCFLEERELLASLPEDPLAASANAYEVAT 115 (203)
T ss_dssp HHHTTCHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHSCCCHHHHHHHHHHHHH
T ss_pred HHHhCcHHHHHHHHHHHHHHHHHcCCcHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHcCccHHHHHHHHHHHHH
Confidence 4567899999999999988 33455678899999999999999999999999887 342 2456888999
Q ss_pred HHHHhcCCHHHHHHHHHHHHhcCCC--c----HHHHHHHHHHHHhhcccccC
Q psy12719 71 LMLQARGNVDEAIKLIEKAISIDKS--C----MFAYETLGTIEVQRTFVVLW 116 (116)
Q Consensus 71 ~~~~~~~~~~~a~~~~~~~~~~~~~--~----~~~~~~l~~~~~~~~~~~~a 116 (116)
++.. .|++++|...+++++...+. + ..++..+|.++...|++++|
T Consensus 116 ~~~~-~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A 166 (203)
T 3gw4_A 116 VALH-FGDLAGARQEYEKSLVYAQQADDQVAIACAFRGLGDLAQQEKNLLEA 166 (203)
T ss_dssp HHHH-HTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHH
T ss_pred HHHH-hCCHHHHHHHHHHHHHHHHhccchHHHHHHHHHHHHHHHHCcCHHHH
Confidence 9887 89999999999999876321 1 34568899999999988764
No 150
>3q15_A PSP28, response regulator aspartate phosphatase H; tetratricopeptide repeat, 3-helix bundle, phosphorelay signa transduction, phosphatase; 2.19A {Bacillus subtilis}
Probab=99.61 E-value=2.6e-15 Score=90.52 Aligned_cols=113 Identities=12% Similarity=0.018 Sum_probs=95.7
Q ss_pred cccchhcHHHHHHHHHHHHhhCCC-------hhHHHHHHHHHHHhhcChhhHHHHHHHHhccCCC------CHHHHHHHH
Q psy12719 3 VPGDRERVEQSLKEFRNFVDTHSN-------VVEACTLFAQVLVDQEDFDGAEEYFNRSIRVDPE------NASLYVHRA 69 (116)
Q Consensus 3 ~~~~~~~~~~A~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~A~~~~~~a~~~~~~------~~~~~~~~~ 69 (116)
++...|++++|+..+.+++...+. ...++..+|.++...|++++|+..+++++.+.+. ...++.++|
T Consensus 150 ~y~~~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~lg~~y~~~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~lg 229 (378)
T 3q15_A 150 AYYHMKQTHVSMYHILQALDIYQNHPLYSIRTIQSLFVIAGNYDDFKHYDKALPHLEAALELAMDIQNDRFIAISLLNIA 229 (378)
T ss_dssp HHHHTTCHHHHHHHHHHHHHHHHTSTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHH
T ss_pred HHHHcCCcHHHHHHHHHHHHHHHhCCCchhhHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHH
Confidence 345678999999999999987543 2457889999999999999999999999986431 245788999
Q ss_pred HHHHHhcCCHHHHHHHHHHHHh-----cCCCcHHHHHHHHHHHHhhcccccC
Q psy12719 70 MLMLQARGNVDEAIKLIEKAIS-----IDKSCMFAYETLGTIEVQRTFVVLW 116 (116)
Q Consensus 70 ~~~~~~~~~~~~a~~~~~~~~~-----~~~~~~~~~~~l~~~~~~~~~~~~a 116 (116)
.++.. .|++++|+..+++++. .+|..+.++..+|.++...|++++|
T Consensus 230 ~~y~~-~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A 280 (378)
T 3q15_A 230 NSYDR-SGDDQMAVEHFQKAAKVSREKVPDLLPKVLFGLSWTLCKAGQTQKA 280 (378)
T ss_dssp HHHHH-HTCHHHHHHHHHHHHHHHHHHCGGGHHHHHHHHHHHHHHTTCHHHH
T ss_pred HHHHH-CCCHHHHHHHHHHHHHHHHhhCChhHHHHHHHHHHHHHHCCCHHHH
Confidence 99887 8999999999999999 7888888999999999999998764
No 151
>3ro2_A PINS homolog, G-protein-signaling modulator 2; TPR repeat, protein-protein interaction, protein-binding, PR binding; 2.30A {Mus musculus}
Probab=99.60 E-value=2.8e-15 Score=87.99 Aligned_cols=108 Identities=16% Similarity=0.154 Sum_probs=94.5
Q ss_pred ccchhcHHHHHHHHHHHHhhCCCh----hHHHHHHHHHHHhhcChhhHHHHHHHHhcc------CCCCHHHHHHHHHHHH
Q psy12719 4 PGDRERVEQSLKEFRNFVDTHSNV----VEACTLFAQVLVDQEDFDGAEEYFNRSIRV------DPENASLYVHRAMLML 73 (116)
Q Consensus 4 ~~~~~~~~~A~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~A~~~~~~a~~~------~~~~~~~~~~~~~~~~ 73 (116)
+...|++++|+..+++++...|++ ..++..+|.++...|++++|+..+++++.. .|....++..+|.++.
T Consensus 15 ~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~l~~~~~ 94 (338)
T 3ro2_A 15 LCKSGDCRAGVSFFEAAVQVGTEDLKTLSAIYSQLGNAYFYLHDYAKALEYHHHDLTLARTIGDQLGEAKASGNLGNTLK 94 (338)
T ss_dssp HHHTTCHHHHHHHHHHHHHHCCSCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHH
T ss_pred HHHhccHHHHHHHHHHHHhhCcccHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHhhcccccHHHHHHHHHHHHHHH
Confidence 456799999999999999999988 467889999999999999999999999877 4455778999999988
Q ss_pred HhcCCHHHHHHHHHHHHhcCCCc------HHHHHHHHHHHHhhcc
Q psy12719 74 QARGNVDEAIKLIEKAISIDKSC------MFAYETLGTIEVQRTF 112 (116)
Q Consensus 74 ~~~~~~~~a~~~~~~~~~~~~~~------~~~~~~l~~~~~~~~~ 112 (116)
. .|++++|+..+.+++...+.. ..++..+|.++...|+
T Consensus 95 ~-~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~l~~~~~~~~~ 138 (338)
T 3ro2_A 95 V-LGNFDEAIVCCQRHLDISRELNDKVGEARALYNLGNVYHAKGK 138 (338)
T ss_dssp H-TTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHH
T ss_pred H-ccCHHHHHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHcCc
Confidence 7 899999999999999875543 4488899999999998
No 152
>2ifu_A Gamma-SNAP; membrane fusion, snare complex disassembly, protein structure initiative, PSI, center for eukaryotic structural genomics, CESG; HET: MSE; 2.60A {Danio rerio}
Probab=99.59 E-value=8.2e-16 Score=90.61 Aligned_cols=110 Identities=15% Similarity=0.126 Sum_probs=70.8
Q ss_pred ccchhcHHHHHHHHHHHHhhCCC------hhHHHHHHHHHHHhhcChhhHHHHHHHHhccCCCC------HHHHHHHHHH
Q psy12719 4 PGDRERVEQSLKEFRNFVDTHSN------VVEACTLFAQVLVDQEDFDGAEEYFNRSIRVDPEN------ASLYVHRAML 71 (116)
Q Consensus 4 ~~~~~~~~~A~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~A~~~~~~a~~~~~~~------~~~~~~~~~~ 71 (116)
+..+|++++|+..|++++...+. ...++..+|.++.. |++++|+.+|++++.+.|.. ..++.++|.+
T Consensus 86 ~~~~g~~~~A~~~~~~Al~l~~~~g~~~~~a~~~~~lg~~~~~-g~~~~A~~~~~~Al~~~~~~~~~~~~~~~~~~lg~~ 164 (307)
T 2ifu_A 86 LKDLQRMPEAVQYIEKASVMYVENGTPDTAAMALDRAGKLMEP-LDLSKAVHLYQQAAAVFENEERLRQAAELIGKASRL 164 (307)
T ss_dssp HHHTTCGGGGHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHHTT-TCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred HHhCCCHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHc-CCHHHHHHHHHHHHHHHHhCCChhHHHHHHHHHHHH
Confidence 34456777777777777666422 13466677777766 77777777777777665533 4566777777
Q ss_pred HHHhcCCHHHHHHHHHHHHhcCCCc------HHHHHHHHHHHHhhccccc
Q psy12719 72 MLQARGNVDEAIKLIEKAISIDKSC------MFAYETLGTIEVQRTFVVL 115 (116)
Q Consensus 72 ~~~~~~~~~~a~~~~~~~~~~~~~~------~~~~~~l~~~~~~~~~~~~ 115 (116)
+.. +|++++|+..+++++...|.. ..++..++.++..+|++++
T Consensus 165 ~~~-~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~ 213 (307)
T 2ifu_A 165 LVR-QQKFDEAAASLQKEKSMYKEMENYPTCYKKCIAQVLVQLHRADYVA 213 (307)
T ss_dssp HHH-TTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHH
T ss_pred HHH-cCCHHHHHHHHHHHHHHHHHcCChhHHHHHHHHHHHHHHHcCCHHH
Confidence 666 677777777777777764432 2356666667766666654
No 153
>3gw4_A Uncharacterized protein; structural genomics, PSI-2, protein structure initiative, no structural genomics consortium, NESG, DRR162B; 2.49A {Deinococcus radiodurans R1}
Probab=99.59 E-value=1.8e-14 Score=79.68 Aligned_cols=111 Identities=11% Similarity=0.027 Sum_probs=89.7
Q ss_pred cchhcHHHHHHHHHHHHhhCCChhHHHHHHHHHHHhhcChhhHHHHHHHHhc------cCCCCHHHHHHHHHHHHHhcCC
Q psy12719 5 GDRERVEQSLKEFRNFVDTHSNVVEACTLFAQVLVDQEDFDGAEEYFNRSIR------VDPENASLYVHRAMLMLQARGN 78 (116)
Q Consensus 5 ~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~a~~------~~~~~~~~~~~~~~~~~~~~~~ 78 (116)
...|++++|.+.++......+....++..+|.++...|++++|+..+++++. ..|....++..+|.++.. .|+
T Consensus 3 ~~~g~~~~A~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~l~~~~~~-~g~ 81 (203)
T 3gw4_A 3 FEAHDYALAERQAQALLAHPATASGARFMLGYVYAFMDRFDEARASFQALQQQAQKSGDHTAEHRALHQVGMVERM-AGN 81 (203)
T ss_dssp ----CHHHHHHHHHHHHTSTTTHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHH-TTC
T ss_pred cccccHHHHHHHHHHhcCChHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHcCCcHHHHHHHHHHHHHHHH-cCC
Confidence 4679999999965555443346788999999999999999999999999998 444557789999999887 899
Q ss_pred HHHHHHHHHHHHhc---CC----CcHHHHHHHHHHHHhhcccccC
Q psy12719 79 VDEAIKLIEKAISI---DK----SCMFAYETLGTIEVQRTFVVLW 116 (116)
Q Consensus 79 ~~~a~~~~~~~~~~---~~----~~~~~~~~l~~~~~~~~~~~~a 116 (116)
+++|+..+.+++.. .+ ....++..+|.++...|++++|
T Consensus 82 ~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~lg~~~~~~g~~~~A 126 (203)
T 3gw4_A 82 WDAARRCFLEERELLASLPEDPLAASANAYEVATVALHFGDLAGA 126 (203)
T ss_dssp HHHHHHHHHHHHHHHHHSCCCHHHHHHHHHHHHHHHHHHTCHHHH
T ss_pred HHHHHHHHHHHHHHHHHcCccHHHHHHHHHHHHHHHHHhCCHHHH
Confidence 99999999999988 33 2356789999999999998764
No 154
>3sf4_A G-protein-signaling modulator 2; tetratricopeptide repeat, TPR, cell polarity, asymmetric CEL division, mitotic spindle orientation; 2.60A {Homo sapiens}
Probab=99.59 E-value=3.3e-15 Score=89.99 Aligned_cols=108 Identities=16% Similarity=0.162 Sum_probs=95.0
Q ss_pred ccchhcHHHHHHHHHHHHhhCCChh----HHHHHHHHHHHhhcChhhHHHHHHHHhcc------CCCCHHHHHHHHHHHH
Q psy12719 4 PGDRERVEQSLKEFRNFVDTHSNVV----EACTLFAQVLVDQEDFDGAEEYFNRSIRV------DPENASLYVHRAMLML 73 (116)
Q Consensus 4 ~~~~~~~~~A~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~A~~~~~~a~~~------~~~~~~~~~~~~~~~~ 73 (116)
+...|++++|+..|++++...|.++ .++..+|.++...|++++|+.++++++.. .|....++..+|.++.
T Consensus 19 ~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~la~~~~ 98 (406)
T 3sf4_A 19 LCKSGDCRAGVSFFEAAVQVGTEDLKTLSAIYSQLGNAYFYLHDYAKALEYHHHDLTLARTIGDQLGEAKASGNLGNTLK 98 (406)
T ss_dssp HHHTTCHHHHHHHHHHHHHHCCSCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHH
T ss_pred HHHhccHHHHHHHHHHHHhcCcccHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHhccccHHHHHHHHHHHHHHH
Confidence 4567999999999999999999874 57889999999999999999999999876 3444678999999988
Q ss_pred HhcCCHHHHHHHHHHHHhcCCCc------HHHHHHHHHHHHhhcc
Q psy12719 74 QARGNVDEAIKLIEKAISIDKSC------MFAYETLGTIEVQRTF 112 (116)
Q Consensus 74 ~~~~~~~~a~~~~~~~~~~~~~~------~~~~~~l~~~~~~~~~ 112 (116)
. .|++++|+..+.+++...|.. ..++..+|.++...|+
T Consensus 99 ~-~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~l~~~~~~~g~ 142 (406)
T 3sf4_A 99 V-LGNFDEAIVCCQRHLDISRELNDKVGEARALYNLGNVYHAKGK 142 (406)
T ss_dssp H-TTCHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHHH
T ss_pred H-cCCHHHHHHHHHHHHHHHHhcccccchHHHHHHHHHHHHHcCC
Confidence 7 899999999999999986654 4589999999999998
No 155
>4a1s_A PINS, partner of inscuteable; cell cycle, LGN, mitotic spindle orientation, asymmetric CEL divisions; 2.10A {Drosophila melanogaster}
Probab=99.59 E-value=1.5e-15 Score=91.94 Aligned_cols=112 Identities=12% Similarity=0.029 Sum_probs=94.7
Q ss_pred ccchhcHHHHHHHHHHHHhhCCChhH------HHHHHHHHHHhhcChhhHHHHHHHHhccCCCC------HHHHHHHHHH
Q psy12719 4 PGDRERVEQSLKEFRNFVDTHSNVVE------ACTLFAQVLVDQEDFDGAEEYFNRSIRVDPEN------ASLYVHRAML 71 (116)
Q Consensus 4 ~~~~~~~~~A~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~A~~~~~~a~~~~~~~------~~~~~~~~~~ 71 (116)
+...|++++|+..+++++...|.... ++..+|.++...|++++|+..+++++...|.. ..++..+|.+
T Consensus 233 ~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~la~~ 312 (411)
T 4a1s_A 233 YYLLGDFQAAIEHHQERLRIAREFGDRAAERRANSNLGNSHIFLGQFEDAAEHYKRTLALAVELGEREVEAQSCYSLGNT 312 (411)
T ss_dssp HHHTTCHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred HHHcCChHHHHHHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHCcCHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHH
Confidence 45678999999999999988776544 88899999999999999999999999887654 6678899999
Q ss_pred HHHhcCCHHHHHHHHHHHHhcCCCc------HHHHHHHHHHHHhhcccccC
Q psy12719 72 MLQARGNVDEAIKLIEKAISIDKSC------MFAYETLGTIEVQRTFVVLW 116 (116)
Q Consensus 72 ~~~~~~~~~~a~~~~~~~~~~~~~~------~~~~~~l~~~~~~~~~~~~a 116 (116)
+.. .|++++|...+++++...+.. ..++..+|.++...|++++|
T Consensus 313 ~~~-~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A 362 (411)
T 4a1s_A 313 YTL-LHEFNTAIEYHNRHLAIAQELGDRIGEARACWSLGNAHSAIGGHERA 362 (411)
T ss_dssp HHH-TTCHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHTTCHHHH
T ss_pred HHH-cCCHHHHHHHHHHHHHHHHHCCChHHHHHHHHHHHHHHHHhccHHHH
Confidence 877 899999999999999875433 55888999999999988764
No 156
>2ooe_A Cleavage stimulation factor 77 kDa subunit; HAT domain, structural protein; 3.00A {Mus musculus} SCOP: a.118.8.7
Probab=99.58 E-value=7.2e-14 Score=87.54 Aligned_cols=105 Identities=13% Similarity=0.116 Sum_probs=91.4
Q ss_pred HHHHHHHHHHHhhCCChhHHHHHHHHHHHh-------hcChh-------hHHHHHHHHhc-cCCCCHHHHHHHHHHHHHh
Q psy12719 11 EQSLKEFRNFVDTHSNVVEACTLFAQVLVD-------QEDFD-------GAEEYFNRSIR-VDPENASLYVHRAMLMLQA 75 (116)
Q Consensus 11 ~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~-------~A~~~~~~a~~-~~~~~~~~~~~~~~~~~~~ 75 (116)
.+++..|++++..+|.++.+|..+|..+.. .|+++ +|+..|++++. ..|++..+|..++..+..
T Consensus 255 ~~a~~~y~~al~~~p~~~~~w~~~~~~~~~~~~~~~~~g~~~~a~~~~~~A~~~~~~Al~~~~p~~~~l~~~~~~~~~~- 333 (530)
T 2ooe_A 255 KRVMFAYEQCLLVLGHHPDIWYEAAQYLEQSSKLLAEKGDMNNAKLFSDEAANIYERAISTLLKKNMLLYFAYADYEES- 333 (530)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHTTTCCHHHHHHHHHHHHHHHHHTTTTCSSCHHHHHHHHHHHHH-
T ss_pred HHHHHHHHHHHHhCCCCHHHHHHHHHHHHHhchhhhhccchhhhhhhhHHHHHHHHHHHHHhCcccHHHHHHHHHHHHh-
Confidence 467789999999999999999999998876 68877 89999999997 789999999999998776
Q ss_pred cCCHHHHHHHHHHHHhcCCCcH-HHHHHHHHHHHhhcccccC
Q psy12719 76 RGNVDEAIKLIEKAISIDKSCM-FAYETLGTIEVQRTFVVLW 116 (116)
Q Consensus 76 ~~~~~~a~~~~~~~~~~~~~~~-~~~~~l~~~~~~~~~~~~a 116 (116)
.|++++|...++++++..|.++ .+|..++.++...|++++|
T Consensus 334 ~g~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~~~~~~~~~A 375 (530)
T 2ooe_A 334 RMKYEKVHSIYNRLLAIEDIDPTLVYIQYMKFARRAEGIKSG 375 (530)
T ss_dssp TTCHHHHHHHHHHHHHSSSSCHHHHHHHHHHHHHHHHHHHHH
T ss_pred cCCHHHHHHHHHHHhCccccCchHHHHHHHHHHHHhcCHHHH
Confidence 8999999999999999999875 5899999988888876653
No 157
>3u3w_A Transcriptional activator PLCR protein; ternary complex, PLCR-PAPR7-DNA, HTH DNA-binding domain, QUO sensing; 2.40A {Bacillus thuringiensis} PDB: 2qfc_A
Probab=99.58 E-value=1.9e-14 Score=84.19 Aligned_cols=111 Identities=9% Similarity=0.009 Sum_probs=91.5
Q ss_pred cchhcHHHHHHHHHHHHhhCCChhH------HHHHHHHHHHhhcChhhHHHHHHHHhccCCCC------HHHHHHHHHHH
Q psy12719 5 GDRERVEQSLKEFRNFVDTHSNVVE------ACTLFAQVLVDQEDFDGAEEYFNRSIRVDPEN------ASLYVHRAMLM 72 (116)
Q Consensus 5 ~~~~~~~~A~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~A~~~~~~a~~~~~~~------~~~~~~~~~~~ 72 (116)
...|++++|+..+++++...+..+. .+..+|.++...+++++|+.++++++...+.. ..++.++|.++
T Consensus 86 ~~~~~y~~a~~~~~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~Ai~~~~~al~~~~~~~~~~~~~~~~~~lg~~y 165 (293)
T 3u3w_A 86 CKQKRYKEIYNKVWNELKKEEYHPEFQQFLQWQYYVAAYVLKKVDYEYCILELKKLLNQQLTGIDVYQNLYIENAIANIY 165 (293)
T ss_dssp HHTTCHHHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHTTSSCHHHHHHHHHHHHHTCCCCSCTTHHHHHHHHHHHHH
T ss_pred HHHhhHHHHHHHHHHHhccccCChHHHHHHHHHHHHHHHHHcccCHHHHHHHHHHHHHHhcccccHHHHHHHHHHHHHHH
Confidence 4578999999999999998776544 33458889989999999999999999865432 34789999998
Q ss_pred HHhcCCHHHHHHHHHHHHhc-------CCCcHHHHHHHHHHHHhhcccccC
Q psy12719 73 LQARGNVDEAIKLIEKAISI-------DKSCMFAYETLGTIEVQRTFVVLW 116 (116)
Q Consensus 73 ~~~~~~~~~a~~~~~~~~~~-------~~~~~~~~~~l~~~~~~~~~~~~a 116 (116)
.. .|++++|+..++++++. .+....++.++|.++..+|++++|
T Consensus 166 ~~-~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~nlg~~y~~~~~y~~A 215 (293)
T 3u3w_A 166 AE-NGYLKKGIDLFEQILKQLEALHDNEEFDVKVRYNHAKALYLDSRYEES 215 (293)
T ss_dssp HH-TTCHHHHHHHHHHHHHHHHHSSCCHHHHHHHHHHHHHHHHHTTCHHHH
T ss_pred HH-cCCHHHHHHHHHHHHHHHHhcccchhHHHHHHHHHHHHHHHHhHHHHH
Confidence 87 89999999999999952 223356899999999999998875
No 158
>3ro2_A PINS homolog, G-protein-signaling modulator 2; TPR repeat, protein-protein interaction, protein-binding, PR binding; 2.30A {Mus musculus}
Probab=99.58 E-value=3.8e-15 Score=87.41 Aligned_cols=112 Identities=12% Similarity=0.019 Sum_probs=94.2
Q ss_pred ccchhcHHHHHHHHHHHHhhCCChh------HHHHHHHHHHHhhcChhhHHHHHHHHhccCCCC------HHHHHHHHHH
Q psy12719 4 PGDRERVEQSLKEFRNFVDTHSNVV------EACTLFAQVLVDQEDFDGAEEYFNRSIRVDPEN------ASLYVHRAML 71 (116)
Q Consensus 4 ~~~~~~~~~A~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~A~~~~~~a~~~~~~~------~~~~~~~~~~ 71 (116)
+...|++++|+..+++++...+... .++..+|.++...|++++|+..+++++...|.. ..++..+|.+
T Consensus 193 ~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~la~~ 272 (338)
T 3ro2_A 193 HYLLGNFRDAVIAHEQRLLIAKEFGDKAAERRAYSNLGNAYIFLGEFETASEYYKKTLLLARQLKDRAVEAQSCYSLGNT 272 (338)
T ss_dssp HHHHTCHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred HHHhCCHHHHHHHHHHHHHHHHhcCChHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHhhcchhHHHHHHHHHHHH
Confidence 4567899999999999998765543 388999999999999999999999999876655 6688899999
Q ss_pred HHHhcCCHHHHHHHHHHHHhcCCCc------HHHHHHHHHHHHhhcccccC
Q psy12719 72 MLQARGNVDEAIKLIEKAISIDKSC------MFAYETLGTIEVQRTFVVLW 116 (116)
Q Consensus 72 ~~~~~~~~~~a~~~~~~~~~~~~~~------~~~~~~l~~~~~~~~~~~~a 116 (116)
+.. .|++++|...+++++...+.. ..++..++.++...|++++|
T Consensus 273 ~~~-~g~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A 322 (338)
T 3ro2_A 273 YTL-LQDYEKAIDYHLKHLAIAQELKDRIGEGRACWSLGNAYTALGNHDQA 322 (338)
T ss_dssp HHH-TTCHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHTCHHHH
T ss_pred HHH-hcCHHHHHHHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHcCChHHH
Confidence 877 899999999999999875543 55788999999999998764
No 159
>4f3v_A ESX-1 secretion system protein ECCA1; tetratricopeptide repeat, TPR domain, ATPase, protein secret protein transport; 2.00A {Mycobacterium tuberculosis}
Probab=99.57 E-value=1.3e-14 Score=84.41 Aligned_cols=111 Identities=8% Similarity=-0.056 Sum_probs=89.9
Q ss_pred ccchhcHHHHHHHHHHHHhhCCChhHHHHHHHHHHHhhcChhhHHHHHHHHhccCCCC--HHHHHHHHHHHHHhcCCHHH
Q psy12719 4 PGDRERVEQSLKEFRNFVDTHSNVVEACTLFAQVLVDQEDFDGAEEYFNRSIRVDPEN--ASLYVHRAMLMLQARGNVDE 81 (116)
Q Consensus 4 ~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~a~~~~~~~--~~~~~~~~~~~~~~~~~~~~ 81 (116)
+...|+|++|.+.|...+...|++. +.+.+|.++...+++++|+..|+.+....+.. ..+++.+|.++.. +|++++
T Consensus 112 L~~~g~y~eA~~~l~~~~~~~p~~~-~~~~~a~l~~~~~r~~dA~~~l~~a~~~~d~~~~~~a~~~LG~al~~-LG~~~e 189 (282)
T 4f3v_A 112 EAAQGNYADAMEALEAAPVAGSEHL-VAWMKAVVYGAAERWTDVIDQVKSAGKWPDKFLAGAAGVAHGVAAAN-LALFTE 189 (282)
T ss_dssp HHHHTCHHHHHHHHTSSCCTTCHHH-HHHHHHHHHHHTTCHHHHHHHHTTGGGCSCHHHHHHHHHHHHHHHHH-TTCHHH
T ss_pred HHHCCCHHHHHHHHHHHHhcCCchH-HHHHHHHHHHHcCCHHHHHHHHHHhhccCCcccHHHHHHHHHHHHHH-CCCHHH
Confidence 4567889999999999888888888 88889999999999999999998777653221 3478888998666 899999
Q ss_pred HHHHHHHHHhcC--CC-cHHHHHHHHHHHHhhcccccC
Q psy12719 82 AIKLIEKAISID--KS-CMFAYETLGTIEVQRTFVVLW 116 (116)
Q Consensus 82 a~~~~~~~~~~~--~~-~~~~~~~l~~~~~~~~~~~~a 116 (116)
|+..|++++.-. |. .+.+++.+|.++..+|+.++|
T Consensus 190 Al~~l~~a~~g~~~P~~~~da~~~~glaL~~lGr~deA 227 (282)
T 4f3v_A 190 AERRLTEANDSPAGEACARAIAWYLAMARRSQGNESAA 227 (282)
T ss_dssp HHHHHHHHHTSTTTTTTHHHHHHHHHHHHHHHTCHHHH
T ss_pred HHHHHHHHhcCCCCccccHHHHHHHHHHHHHcCCHHHH
Confidence 999999988543 55 567889999999999988764
No 160
>3qou_A Protein YBBN; thioredoxin-like fold, tetratricopeptide repeat, lysine dimethylation, protein binding; HET: MLY; 1.80A {Escherichia coli} PDB: 3qdn_A*
Probab=99.57 E-value=5.6e-14 Score=82.17 Aligned_cols=93 Identities=10% Similarity=0.011 Sum_probs=81.9
Q ss_pred hCCChhHHHHHHHHHHHhhcChhhHHHHHHHHhccCCCCHHHHHHHHHHHHHhcCCHHHHHHHHHH--------------
Q psy12719 23 THSNVVEACTLFAQVLVDQEDFDGAEEYFNRSIRVDPENASLYVHRAMLMLQARGNVDEAIKLIEK-------------- 88 (116)
Q Consensus 23 ~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~-------------- 88 (116)
..|++.+.+..+|..+...|++++|+..|++++..+|+++.+++.+|.++.. .|++++|+..+++
T Consensus 112 ~lp~~~~~~~~~a~~~~~~g~~~~A~~~~~~al~~~P~~~~a~~~la~~~~~-~g~~~~A~~~l~~~~~~~p~~~~~~~~ 190 (287)
T 3qou_A 112 VLPREEELXAQQAMQLMQESNYTDALPLLXDAWQLSNQNGEIGLLLAETLIA-LNRSEDAEAVLXTIPLQDQDTRYQGLV 190 (287)
T ss_dssp HSCCHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHTTSCHHHHHHHHHHHHH-TTCHHHHHHHHTTSCGGGCSHHHHHHH
T ss_pred HcCCchhhHHHHHHHHHhCCCHHHHHHHHHHHHHhCCcchhHHHHHHHHHHH-CCCHHHHHHHHHhCchhhcchHHHHHH
Confidence 3489999999999999999999999999999999999999999999999887 8998887655544
Q ss_pred --------------------HHhcCCCcHHHHHHHHHHHHhhcccccC
Q psy12719 89 --------------------AISIDKSCMFAYETLGTIEVQRTFVVLW 116 (116)
Q Consensus 89 --------------------~~~~~~~~~~~~~~l~~~~~~~~~~~~a 116 (116)
++..+|+++.++..+|.++...|++++|
T Consensus 191 ~~~~l~~~~~~~~a~~~l~~al~~~P~~~~~~~~la~~l~~~g~~~~A 238 (287)
T 3qou_A 191 AQIELLXQAADTPEIQQLQQQVAENPEDAALATQLALQLHQVGRNEEA 238 (287)
T ss_dssp HHHHHHHHHTSCHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHH
T ss_pred HHHHHHhhcccCccHHHHHHHHhcCCccHHHHHHHHHHHHHcccHHHH
Confidence 4566888888999999999999988764
No 161
>1ihg_A Cyclophilin 40; ppiase immunophilin tetratricopeptide, isomerase; 1.80A {Bos taurus} SCOP: a.118.8.1 b.62.1.1 PDB: 1iip_A
Probab=99.57 E-value=1.7e-14 Score=87.18 Aligned_cols=88 Identities=14% Similarity=0.054 Sum_probs=82.5
Q ss_pred hHHHHHHHHHHHhhcChhhHHHHHHHHhc----------------cCCCCHHHHHHHHHHHHHhcCCHHHHHHHHHHHHh
Q psy12719 28 VEACTLFAQVLVDQEDFDGAEEYFNRSIR----------------VDPENASLYVHRAMLMLQARGNVDEAIKLIEKAIS 91 (116)
Q Consensus 28 ~~~~~~~~~~~~~~~~~~~A~~~~~~a~~----------------~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~ 91 (116)
...+..+|..++..|++++|+..|++++. .+|....++.++|.+++. +|++++|+..++++++
T Consensus 223 a~~~~~~g~~~~~~g~~~~Ai~~y~kAl~~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~~-~g~~~~A~~~~~~al~ 301 (370)
T 1ihg_A 223 SEDLKNIGNTFFKSQNWEMAIKKYTKVLRYVEGSRAAAEDADGAKLQPVALSCVLNIGACKLK-MSDWQGAVDSCLEALE 301 (370)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHHSCHHHHGGGHHHHHHHHHHHHHHHHH-TTCHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHhcCHHHHHHHHHHHHHHhhcCccccChHHHHHHHHHHHHHHHHHHHHHHh-ccCHHHHHHHHHHHHH
Confidence 45688999999999999999999999998 777888999999999888 9999999999999999
Q ss_pred cCCCcHHHHHHHHHHHHhhcccccC
Q psy12719 92 IDKSCMFAYETLGTIEVQRTFVVLW 116 (116)
Q Consensus 92 ~~~~~~~~~~~l~~~~~~~~~~~~a 116 (116)
.+|+++.+++.+|.++..+|++++|
T Consensus 302 ~~p~~~~a~~~lg~~~~~~g~~~eA 326 (370)
T 1ihg_A 302 IDPSNTKALYRRAQGWQGLKEYDQA 326 (370)
T ss_dssp TCTTCHHHHHHHHHHHHHTTCHHHH
T ss_pred hCchhHHHHHHHHHHHHHccCHHHH
Confidence 9999999999999999999998865
No 162
>2if4_A ATFKBP42; FKBP-like, alpha-beta, TPR-like, alpha, signaling protein; 2.85A {Arabidopsis thaliana}
Probab=99.57 E-value=3.6e-15 Score=89.06 Aligned_cols=93 Identities=12% Similarity=0.068 Sum_probs=85.2
Q ss_pred hCCChhHHHHHHHHHHHhhcChhhHHHHHHHHhccCCCCH-----------------HHHHHHHHHHHHhcCCHHHHHHH
Q psy12719 23 THSNVVEACTLFAQVLVDQEDFDGAEEYFNRSIRVDPENA-----------------SLYVHRAMLMLQARGNVDEAIKL 85 (116)
Q Consensus 23 ~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~a~~~~~~~~-----------------~~~~~~~~~~~~~~~~~~~a~~~ 85 (116)
..+.....+..+|..++..|++++|+..|++++...|.+. .+++++|.+++. +|++++|+..
T Consensus 174 ~~~~~a~~~~~~g~~~~~~g~~~~A~~~y~~Al~~~p~~~~~~~~~~~~~~~~~l~~~~~~nla~~~~~-~g~~~~A~~~ 252 (338)
T 2if4_A 174 ERIGAADRRKMDGNSLFKEEKLEEAMQQYEMAIAYMGDDFMFQLYGKYQDMALAVKNPCHLNIAACLIK-LKRYDEAIGH 252 (338)
T ss_dssp HHHHHHHHHHHHHHHTCSSSCCHHHHHHHHHHHHHSCHHHHHTCCHHHHHHHHHHHTHHHHHHHHHHHT-TTCCHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHhccchhhhhcccHHHHHHHHHHHHHHHHHHHHHH-cCCHHHHHHH
Confidence 3345567889999999999999999999999999999877 489999999887 8999999999
Q ss_pred HHHHHhcCCCcHHHHHHHHHHHHhhcccccC
Q psy12719 86 IEKAISIDKSCMFAYETLGTIEVQRTFVVLW 116 (116)
Q Consensus 86 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~a 116 (116)
+.+++..+|+++.+++.+|.++..+|++++|
T Consensus 253 ~~~al~~~p~~~~a~~~lg~a~~~~g~~~~A 283 (338)
T 2if4_A 253 CNIVLTEEEKNPKALFRRGKAKAELGQMDSA 283 (338)
T ss_dssp HHHHHHHCTTCHHHHHHHHHHHHTTTCHHHH
T ss_pred HHHHHHhCCCCHHHHHHHHHHHHHcCCHHHH
Confidence 9999999999999999999999999998864
No 163
>1na3_A Designed protein CTPR2; de novo protein; HET: IPT; 1.55A {Unidentified} SCOP: k.38.1.1 PDB: 2avp_A
Probab=99.56 E-value=3.9e-14 Score=69.10 Aligned_cols=71 Identities=18% Similarity=0.301 Sum_probs=67.2
Q ss_pred ccchhcHHHHHHHHHHHHhhCCChhHHHHHHHHHHHhhcChhhHHHHHHHHhccCCCCHHHHHHHHHHHHH
Q psy12719 4 PGDRERVEQSLKEFRNFVDTHSNVVEACTLFAQVLVDQEDFDGAEEYFNRSIRVDPENASLYVHRAMLMLQ 74 (116)
Q Consensus 4 ~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~~ 74 (116)
+...|++++|+..+++++..+|+++.++..+|.++...|++++|+..+++++..+|.++.++..+|.++..
T Consensus 19 ~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~p~~~~~~~~l~~~~~~ 89 (91)
T 1na3_A 19 YYKQGDYDEAIEYYQKALELDPNNAEAWYNLGNAYYKQGDYDEAIEYYQKALELDPNNAEAKQNLGNAKQK 89 (91)
T ss_dssp HHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHH
T ss_pred HHHccCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHhhHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHh
Confidence 45678999999999999999999999999999999999999999999999999999999999999998665
No 164
>2ifu_A Gamma-SNAP; membrane fusion, snare complex disassembly, protein structure initiative, PSI, center for eukaryotic structural genomics, CESG; HET: MSE; 2.60A {Danio rerio}
Probab=99.56 E-value=5.5e-15 Score=87.07 Aligned_cols=111 Identities=16% Similarity=0.147 Sum_probs=93.1
Q ss_pred ccchhcHHHHHHHHHHHHhhCCCh------hHHHHHHHHHHHhhcChhhHHHHHHHHhccCCCC------HHHHHHHHHH
Q psy12719 4 PGDRERVEQSLKEFRNFVDTHSNV------VEACTLFAQVLVDQEDFDGAEEYFNRSIRVDPEN------ASLYVHRAML 71 (116)
Q Consensus 4 ~~~~~~~~~A~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~A~~~~~~a~~~~~~~------~~~~~~~~~~ 71 (116)
+...|++++|+..|.+++...+.. ..++..+|.++...|++++|+.+|++++.+.+.. ..++.++|.+
T Consensus 46 ~~~~g~~~~A~~~~~~al~~~~~~~~~~~~a~~~~~lg~~~~~~g~~~~A~~~~~~Al~l~~~~g~~~~~a~~~~~lg~~ 125 (307)
T 2ifu_A 46 FKNAKQLEQAKDAYLQEAEAHANNRSLFHAAKAFEQAGMMLKDLQRMPEAVQYIEKASVMYVENGTPDTAAMALDRAGKL 125 (307)
T ss_dssp HHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCGGGGHHHHHHHHHHHHTTTCHHHHHHHHHHHHHH
T ss_pred HHHcCCHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHH
Confidence 456789999999999999886532 4588899999999999999999999999875432 4578899999
Q ss_pred HHHhcCCHHHHHHHHHHHHhcCCCc------HHHHHHHHHHHHhhcccccC
Q psy12719 72 MLQARGNVDEAIKLIEKAISIDKSC------MFAYETLGTIEVQRTFVVLW 116 (116)
Q Consensus 72 ~~~~~~~~~~a~~~~~~~~~~~~~~------~~~~~~l~~~~~~~~~~~~a 116 (116)
+ .. |++++|+..+++++.+.|.. ..++.++|.++..+|++++|
T Consensus 126 ~-~~-g~~~~A~~~~~~Al~~~~~~~~~~~~~~~~~~lg~~~~~~g~~~~A 174 (307)
T 2ifu_A 126 M-EP-LDLSKAVHLYQQAAAVFENEERLRQAAELIGKASRLLVRQQKFDEA 174 (307)
T ss_dssp H-TT-TCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHH
T ss_pred H-Hc-CCHHHHHHHHHHHHHHHHhCCChhHHHHHHHHHHHHHHHcCCHHHH
Confidence 5 43 99999999999999987643 57889999999999998864
No 165
>2kc7_A BFR218_protein; tetratricopeptide repeat, all-alpha, GFT-structural genomics, PSI-2, protein structure initiative; NMR {Bacteroides fragilis}
Probab=99.56 E-value=2.8e-15 Score=74.55 Aligned_cols=68 Identities=15% Similarity=0.190 Sum_probs=46.2
Q ss_pred HHHHHHHHhhcChhhHHHHHHHHhccCCCCHH-HHHHHHHHHHHhcCCHHHHHHHHHHHHhcCCCcHHHH
Q psy12719 32 TLFAQVLVDQEDFDGAEEYFNRSIRVDPENAS-LYVHRAMLMLQARGNVDEAIKLIEKAISIDKSCMFAY 100 (116)
Q Consensus 32 ~~~~~~~~~~~~~~~A~~~~~~a~~~~~~~~~-~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~ 100 (116)
+..|..+...|++++|+..|++++..+|.++. +++.+|.++.. .|++++|++.+++++..+|+++.++
T Consensus 4 ~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~lg~~~~~-~~~~~~A~~~~~~al~~~p~~~~~~ 72 (99)
T 2kc7_A 4 LKTIKELINQGDIENALQALEEFLQTEPVGKDEAYYLMGNAYRK-LGDWQKALNNYQSAIELNPDSPALQ 72 (99)
T ss_dssp HHHHHHHHHHTCHHHHHHHHHHHHHHCSSTHHHHHHHHHHHHHH-HTCHHHHHHHHHHHHHHCTTSTHHH
T ss_pred HHHHHHHHHcCCHHHHHHHHHHHHHHCCCcHHHHHHHHHHHHHH-cCCHHHHHHHHHHHHhcCCCcHHHH
Confidence 34566666677777777777777777777666 67777776665 6777777777777777777666555
No 166
>1wao_1 Serine/threonine protein phosphatase 5; hydrolase, protein-protein interactions, TPR, super-helix,; 2.9A {Homo sapiens} SCOP: a.118.8.1 d.159.1.3
Probab=99.56 E-value=1.6e-15 Score=94.19 Aligned_cols=89 Identities=19% Similarity=0.255 Sum_probs=83.2
Q ss_pred hhHHHHHHHHHHHhhcChhhHHHHHHHHhccCCCCHHHHHHHHHHHHHhcCCHHHHHHHHHHHHhcCCCcHHHHHHHHHH
Q psy12719 27 VVEACTLFAQVLVDQEDFDGAEEYFNRSIRVDPENASLYVHRAMLMLQARGNVDEAIKLIEKAISIDKSCMFAYETLGTI 106 (116)
Q Consensus 27 ~~~~~~~~~~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~l~~~ 106 (116)
.+..+..+|..+...|++++|+..|+++++.+|++..++.++|.++.. +|++++|++.++++++.+|+++.++..+|.+
T Consensus 5 ~a~~~~~lg~~~~~~g~~~~A~~~~~~Al~~~p~~~~~~~~lg~~~~~-~g~~~~A~~~~~~al~l~p~~~~~~~~lg~~ 83 (477)
T 1wao_1 5 RAEELKTQANDYFKAKDYENAIKFYSQAIELNPSNAIYYGNRSLAYLR-TECYGYALGDATRAIELDKKYIKGYYRRAAS 83 (477)
T ss_dssp HHTTSSSSSSSTTTTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHH-TTCHHHHHHHHHHHHHSCTTCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhCCHHHHHHHHHHHHHhCCccHHHHHHHHHHHHH-hcCHHHHHHHHHHHHHhCCCCHHHHHHHHHH
Confidence 345667788889999999999999999999999999999999999888 9999999999999999999999999999999
Q ss_pred HHhhcccccC
Q psy12719 107 EVQRTFVVLW 116 (116)
Q Consensus 107 ~~~~~~~~~a 116 (116)
+..+|++++|
T Consensus 84 ~~~~g~~~eA 93 (477)
T 1wao_1 84 NMALGKFRAA 93 (477)
T ss_dssp HHHHTCHHHH
T ss_pred HHHcCCHHHH
Confidence 9999998875
No 167
>3dra_A Protein farnesyltransferase/geranylgeranyltransferase type-1 subunit alpha; geranylgeranyltrasferase, ggtase, ggtase-I, PGGT, prenyltransferase, farnesyltransferase; HET: B3P GRG; 1.80A {Candida albicans}
Probab=99.55 E-value=2e-13 Score=80.61 Aligned_cols=106 Identities=11% Similarity=0.144 Sum_probs=99.2
Q ss_pred hcHHHHHHHHHHHHhhCCChhHHHHHHHHHHHhhcChh--hHHHHHHHHhccCCCCHHHHHHHHHHHHHhcCC------H
Q psy12719 8 ERVEQSLKEFRNFVDTHSNVVEACTLFAQVLVDQEDFD--GAEEYFNRSIRVDPENASLYVHRAMLMLQARGN------V 79 (116)
Q Consensus 8 ~~~~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~A~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~------~ 79 (116)
++++++++.+.+++..+|.+..+|...+.+....+.++ ++++.+.+++..+|.+..+|..++.+... .+. +
T Consensus 124 ~~~~~EL~~~~~~l~~~pkny~aW~~R~~vl~~l~~~~~~~EL~~~~~~i~~d~~N~sAW~~R~~ll~~-l~~~~~~~~~ 202 (306)
T 3dra_A 124 FDPYREFDILEAMLSSDPKNHHVWSYRKWLVDTFDLHNDAKELSFVDKVIDTDLKNNSAWSHRFFLLFS-KKHLATDNTI 202 (306)
T ss_dssp CCTHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCTTCHHHHHHHHHHHHHCTTCHHHHHHHHHHHHS-SGGGCCHHHH
T ss_pred CCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHhcccChHHHHHHHHHHHHhCCCCHHHHHHHHHHHHh-ccccchhhhH
Confidence 67899999999999999999999999999999999999 99999999999999999999999999655 676 9
Q ss_pred HHHHHHHHHHHhcCCCcHHHHHHHHHHHHhhcccc
Q psy12719 80 DEAIKLIEKAISIDKSCMFAYETLGTIEVQRTFVV 114 (116)
Q Consensus 80 ~~a~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~ 114 (116)
+++++.+.+++..+|++..+|..++.++...|+..
T Consensus 203 ~eEl~~~~~aI~~~p~n~SaW~y~~~ll~~~~~~~ 237 (306)
T 3dra_A 203 DEELNYVKDKIVKCPQNPSTWNYLLGIHERFDRSI 237 (306)
T ss_dssp HHHHHHHHHHHHHCSSCHHHHHHHHHHHHHTTCCG
T ss_pred HHHHHHHHHHHHhCCCCccHHHHHHHHHHhcCCCh
Confidence 99999999999999999999999999998887643
No 168
>2kc7_A BFR218_protein; tetratricopeptide repeat, all-alpha, GFT-structural genomics, PSI-2, protein structure initiative; NMR {Bacteroides fragilis}
Probab=99.55 E-value=2.2e-13 Score=67.62 Aligned_cols=84 Identities=15% Similarity=0.262 Sum_probs=72.3
Q ss_pred ccchhcHHHHHHHHHHHHhhCCChhH-HHHHHHHHHHhhcChhhHHHHHHHHhccCCCCHHHHHHHHHHHHHhcCCHHHH
Q psy12719 4 PGDRERVEQSLKEFRNFVDTHSNVVE-ACTLFAQVLVDQEDFDGAEEYFNRSIRVDPENASLYVHRAMLMLQARGNVDEA 82 (116)
Q Consensus 4 ~~~~~~~~~A~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~a 82 (116)
+...|++++|+..+++++..+|+++. ++..+|.++...|++++|+..|++++..+|++..++.. +.+.++
T Consensus 10 ~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~lg~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~---------~~~~~a 80 (99)
T 2kc7_A 10 LINQGDIENALQALEEFLQTEPVGKDEAYYLMGNAYRKLGDWQKALNNYQSAIELNPDSPALQAR---------KMVMDI 80 (99)
T ss_dssp HHHHTCHHHHHHHHHHHHHHCSSTHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCTTSTHHHHH---------HHHHHH
T ss_pred HHHcCCHHHHHHHHHHHHHHCCCcHHHHHHHHHHHHHHcCCHHHHHHHHHHHHhcCCCcHHHHHH---------HHHHHH
Confidence 45689999999999999999999999 99999999999999999999999999999999887743 445566
Q ss_pred HHHHHHHHhcCCCc
Q psy12719 83 IKLIEKAISIDKSC 96 (116)
Q Consensus 83 ~~~~~~~~~~~~~~ 96 (116)
...+.+++..+|++
T Consensus 81 ~~~~~~~~~~~p~~ 94 (99)
T 2kc7_A 81 LNFYNKDMYNQLEH 94 (99)
T ss_dssp HHHHCCTTHHHHCC
T ss_pred HHHHHHHhccCccc
Confidence 77777766666554
No 169
>3dra_A Protein farnesyltransferase/geranylgeranyltransferase type-1 subunit alpha; geranylgeranyltrasferase, ggtase, ggtase-I, PGGT, prenyltransferase, farnesyltransferase; HET: B3P GRG; 1.80A {Candida albicans}
Probab=99.54 E-value=4.2e-13 Score=79.21 Aligned_cols=103 Identities=8% Similarity=0.026 Sum_probs=80.9
Q ss_pred HHHHHHHHHHHhhCCChhHHHHHHHHHHHhhc--ChhhHHHHHHHHhccCCCCHHHHHHHHHHH----HHhc---CCHHH
Q psy12719 11 EQSLKEFRNFVDTHSNVVEACTLFAQVLVDQE--DFDGAEEYFNRSIRVDPENASLYVHRAMLM----LQAR---GNVDE 81 (116)
Q Consensus 11 ~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~----~~~~---~~~~~ 81 (116)
++|+..+.+++..+|++..+|...+.+....+ ++++++..+..++..+|++..+|+.++.++ .. . +++++
T Consensus 50 ~~aL~~t~~~L~~nP~~~taWn~R~~~L~~l~~~~~~eeL~~~~~~L~~nPk~y~aW~~R~~iL~~~~~~-l~~~~~~~~ 128 (306)
T 3dra_A 50 ERALHITELGINELASHYTIWIYRFNILKNLPNRNLYDELDWCEEIALDNEKNYQIWNYRQLIIGQIMEL-NNNDFDPYR 128 (306)
T ss_dssp HHHHHHHHHHHHHCTTCHHHHHHHHHHHHTCTTSCHHHHHHHHHHHHHHCTTCCHHHHHHHHHHHHHHHH-TTTCCCTHH
T ss_pred HHHHHHHHHHHHHCcHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHCcccHHHHHHHHHHHHHHHHh-ccccCCHHH
Confidence 57888888888888888888888888887777 888888888888888888888888888775 33 4 67788
Q ss_pred HHHHHHHHHhcCCCcHHHHHHHHHHHHhhcccc
Q psy12719 82 AIKLIEKAISIDKSCMFAYETLGTIEVQRTFVV 114 (116)
Q Consensus 82 a~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~ 114 (116)
++..+.++++.+|.+..+|...+.+....|.++
T Consensus 129 EL~~~~~~l~~~pkny~aW~~R~~vl~~l~~~~ 161 (306)
T 3dra_A 129 EFDILEAMLSSDPKNHHVWSYRKWLVDTFDLHN 161 (306)
T ss_dssp HHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCTT
T ss_pred HHHHHHHHHHhCCCCHHHHHHHHHHHHHhcccC
Confidence 888888888888888888888888777776654
No 170
>1pc2_A Mitochondria fission protein; unknown function; NMR {Homo sapiens} SCOP: a.118.8.1
Probab=99.54 E-value=5.1e-13 Score=70.94 Aligned_cols=104 Identities=14% Similarity=0.046 Sum_probs=91.1
Q ss_pred cchhcHHHHHHHHHHHHhhCCChhHHHHHHHHHHHhhc---ChhhHHHHHHHHhccC-C-CCHHHHHHHHHHHHHhcCCH
Q psy12719 5 GDRERVEQSLKEFRNFVDTHSNVVEACTLFAQVLVDQE---DFDGAEEYFNRSIRVD-P-ENASLYVHRAMLMLQARGNV 79 (116)
Q Consensus 5 ~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~A~~~~~~a~~~~-~-~~~~~~~~~~~~~~~~~~~~ 79 (116)
........+.+.|.+.+..+|.+.++.+.+|.++.+.+ +.++++..++..++.+ | +...++|++|..+++ .++|
T Consensus 9 l~~~~l~~~~~~y~~e~~~~~~~~~~~F~ya~~Lv~S~~~~~~~~gI~lLe~ll~~~~p~~~rd~lY~LAv~~~k-l~~Y 87 (152)
T 1pc2_A 9 VSVEDLLKFEKKFQSEKAAGSVSKSTQFEYAWCLVRSKYNDDIRKGIVLLEELLPKGSKEEQRDYVFYLAVGNYR-LKEY 87 (152)
T ss_dssp CCHHHHHHHHHHHHHHHHTTCCCHHHHHHHHHHHHTCSSHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHH-TSCH
T ss_pred CCHHHHHHHHHHHHHHHccCCCcHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHhcCCccchHHHHHHHHHHHHH-ccCH
Confidence 34567788889999999988999999999999999977 7789999999999998 7 568899999999988 9999
Q ss_pred HHHHHHHHHHHhcCCCcHHHHHHHHHHHHh
Q psy12719 80 DEAIKLIEKAISIDKSCMFAYETLGTIEVQ 109 (116)
Q Consensus 80 ~~a~~~~~~~~~~~~~~~~~~~~l~~~~~~ 109 (116)
++|.++++++++.+|++..+......+...
T Consensus 88 ~~A~~y~~~lL~ieP~n~QA~~Lk~~ie~~ 117 (152)
T 1pc2_A 88 EKALKYVRGLLQTEPQNNQAKELERLIDKA 117 (152)
T ss_dssp HHHHHHHHHHHHHCTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhcCCCCHHHHHHHHHHHHH
Confidence 999999999999999998877766555443
No 171
>1dce_A Protein (RAB geranylgeranyltransferase alpha subunit); 2.0 A resolution, N-formylmethionine, alpha subunit; HET: FME; 2.00A {Rattus norvegicus} SCOP: a.118.6.1 b.7.4.1 c.10.2.2 PDB: 1ltx_A*
Probab=99.54 E-value=2e-13 Score=86.45 Aligned_cols=100 Identities=15% Similarity=0.254 Sum_probs=53.9
Q ss_pred HHHHHHHHHHHhhCCChhHHHHHHHHHHHhhcC----------hhhHHHHHHHHhccCCCCHHHHHHHHHHHHHhcC--C
Q psy12719 11 EQSLKEFRNFVDTHSNVVEACTLFAQVLVDQED----------FDGAEEYFNRSIRVDPENASLYVHRAMLMLQARG--N 78 (116)
Q Consensus 11 ~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~--~ 78 (116)
++|++.+.+++..+|++..+|...+.+....++ +++++..+.+++..+|++..+|+.++.++.. .+ +
T Consensus 46 eeal~~~~~~l~~nP~~~taW~~R~~~l~~l~~~~~~~~~~~~~~~eL~~~~~~l~~~pK~y~aW~hR~w~l~~-l~~~~ 124 (567)
T 1dce_A 46 ESVLELTSQILGANPDFATLWNCRREVLQHLETEKSPEESAALVKAELGFLESCLRVNPKSYGTWHHRCWLLSR-LPEPN 124 (567)
T ss_dssp HHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHHTTSCHHHHHHHHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHT-CSSCC
T ss_pred HHHHHHHHHHHHHCchhHHHHHHHHHHHHhcccccchhhhhhhHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHH-ccccc
Confidence 344555555555555555555555555555544 5555555555555555555555555555333 45 4
Q ss_pred HHHHHHHHHHHHhcCCCcHHHHHHHHHHHHhhc
Q psy12719 79 VDEAIKLIEKAISIDKSCMFAYETLGTIEVQRT 111 (116)
Q Consensus 79 ~~~a~~~~~~~~~~~~~~~~~~~~l~~~~~~~~ 111 (116)
++++++.+.++++.+|.+..+|...+.+....|
T Consensus 125 ~~~el~~~~k~l~~d~~N~~aW~~R~~~l~~l~ 157 (567)
T 1dce_A 125 WARELELCARFLEADERNFHCWDYRRFVAAQAA 157 (567)
T ss_dssp HHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTC
T ss_pred HHHHHHHHHHHHhhccccccHHHHHHHHHHHcC
Confidence 455555555555555555555555555554444
No 172
>1ouv_A Conserved hypothetical secreted protein; TPR repeat, HCP repeat, cysteine rich protein, loop-helix-TU repeat protein, hydrolase; 2.00A {Helicobacter pylori} SCOP: a.118.18.1
Probab=99.54 E-value=2.5e-13 Score=78.51 Aligned_cols=97 Identities=11% Similarity=0.217 Sum_probs=49.8
Q ss_pred hhcHHHHHHHHHHHHhhCCChhHHHHHHHHHHHh----hcChhhHHHHHHHHhccCCCCHHHHHHHHHHHHHh---cCCH
Q psy12719 7 RERVEQSLKEFRNFVDTHSNVVEACTLFAQVLVD----QEDFDGAEEYFNRSIRVDPENASLYVHRAMLMLQA---RGNV 79 (116)
Q Consensus 7 ~~~~~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~~~---~~~~ 79 (116)
.+++++|+.+|+++++.. ++.++..+|.++.. .+++++|+.+|++++..+ ++.+++.+|.++... .+++
T Consensus 55 ~~~~~~A~~~~~~a~~~~--~~~a~~~lg~~~~~g~~~~~~~~~A~~~~~~a~~~~--~~~a~~~lg~~~~~~~~~~~~~ 130 (273)
T 1ouv_A 55 EKNLKKAASFYAKACDLN--YSNGCHLLGNLYYSGQGVSQNTNKALQYYSKACDLK--YAEGCASLGGIYHDGKVVTRDF 130 (273)
T ss_dssp CCCHHHHHHHHHHHHHTT--CHHHHHHHHHHHHHTSSSCCCHHHHHHHHHHHHHTT--CHHHHHHHHHHHHHCSSSCCCH
T ss_pred CCCHHHHHHHHHHHHHCC--CHHHHHHHHHHHhCCCCcccCHHHHHHHHHHHHHcC--CccHHHHHHHHHHcCCCcccCH
Confidence 455555555555555543 44555555555555 555555555555555442 455555555553320 3555
Q ss_pred HHHHHHHHHHHhcCCCcHHHHHHHHHHHHh
Q psy12719 80 DEAIKLIEKAISIDKSCMFAYETLGTIEVQ 109 (116)
Q Consensus 80 ~~a~~~~~~~~~~~~~~~~~~~~l~~~~~~ 109 (116)
++|+..++++++.. ++.++..+|.++..
T Consensus 131 ~~A~~~~~~a~~~~--~~~a~~~lg~~~~~ 158 (273)
T 1ouv_A 131 KKAVEYFTKACDLN--DGDGCTILGSLYDA 158 (273)
T ss_dssp HHHHHHHHHHHHTT--CHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhcC--cHHHHHHHHHHHHc
Confidence 55555555555543 33444555555544
No 173
>3n71_A Histone lysine methyltransferase SMYD1; heart development, transcription; HET: SFG MES; 2.30A {Mus musculus}
Probab=99.53 E-value=3e-14 Score=88.71 Aligned_cols=111 Identities=14% Similarity=0.138 Sum_probs=90.0
Q ss_pred ccchhcHHHHHHHHHHHHhhC-----CCh---hHHHHHHHHHHHhhcChhhHHHHHHHHhcc-----CCCC---HHHHHH
Q psy12719 4 PGDRERVEQSLKEFRNFVDTH-----SNV---VEACTLFAQVLVDQEDFDGAEEYFNRSIRV-----DPEN---ASLYVH 67 (116)
Q Consensus 4 ~~~~~~~~~A~~~~~~~~~~~-----~~~---~~~~~~~~~~~~~~~~~~~A~~~~~~a~~~-----~~~~---~~~~~~ 67 (116)
+..+|+|++|+..++++++.. |++ ..++.++|.+|..+|+|++|..++++++.+ .|++ ...+.+
T Consensus 319 ~~~qg~~~eA~~l~~~aL~~~~~~lg~~Hp~~a~~~~nLa~~y~~~g~~~eA~~~~~~aL~i~~~~lG~~Hp~~a~~l~n 398 (490)
T 3n71_A 319 ARSEGLYHEVVKLCRECLEKQEPVFADTNLYVLRLLSIASEVLSYLQAYEEASHYARRMVDGYMKLYHHNNAQLGMAVMR 398 (490)
T ss_dssp HHTTTCHHHHHHHHHHHHHHHTTTBCTTSHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHSCTTCHHHHHHHHH
T ss_pred HHhCCCHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHH
Confidence 346899999999999999763 444 567899999999999999999999999865 3444 557899
Q ss_pred HHHHHHHhcCCHHHHHHHHHHHHhc-----CCCc---HHHHHHHHHHHHhhccccc
Q psy12719 68 RAMLMLQARGNVDEAIKLIEKAISI-----DKSC---MFAYETLGTIEVQRTFVVL 115 (116)
Q Consensus 68 ~~~~~~~~~~~~~~a~~~~~~~~~~-----~~~~---~~~~~~l~~~~~~~~~~~~ 115 (116)
+|.+|.. +|++++|+..+++++.+ .|+. ......++.++..++.+++
T Consensus 399 La~~~~~-~G~~~eA~~~~~~Al~i~~~~lG~~Hp~~~~~~~~l~~~~~e~~~~~~ 453 (490)
T 3n71_A 399 AGLTNWH-AGHIEVGHGMICKAYAILLVTHGPSHPITKDLEAMRMQTEMELRMFRQ 453 (490)
T ss_dssp HHHHHHH-TTCHHHHHHHHHHHHHHHHHHTCTTSHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHH-CCCHHHHHHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHHHHHHHHHH
Confidence 9999888 89999999999999975 4444 5566788888877776654
No 174
>3bee_A Putative YFRE protein; putaive YFRE protein, structural GE PSI-2, protein structure initiative; 2.15A {Vibrio parahaemolyticus rimd 2210633}
Probab=99.53 E-value=4e-13 Score=66.31 Aligned_cols=73 Identities=12% Similarity=0.056 Sum_probs=67.4
Q ss_pred CCChhHHHHHHHHHHHhhcC---hhhHHHHHHHHhccCCCCHHHHHHHHHHHHHhcCCHHHHHHHHHHHHhcCCCcH
Q psy12719 24 HSNVVEACTLFAQVLVDQED---FDGAEEYFNRSIRVDPENASLYVHRAMLMLQARGNVDEAIKLIEKAISIDKSCM 97 (116)
Q Consensus 24 ~~~~~~~~~~~~~~~~~~~~---~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~ 97 (116)
+|+++.++..+|.+++..++ .++|...+++++..+|+++.+++.+|..++. .|+|++|+..|+++++.+|.++
T Consensus 2 ~p~~~~~~~~~a~al~~~~~~~~~~~A~~~l~~AL~~dp~~~rA~~~lg~~~~~-~g~y~~Ai~~w~~~l~~~p~~~ 77 (93)
T 3bee_A 2 NAVTATQLAAKATTLYYLHKQAMTDEVSLLLEQALQLEPYNEAALSLIANDHFI-SFRFQEAIDTWVLLLDSNDPNL 77 (93)
T ss_dssp CCCCHHHHHHHHHHHHHTTTTCCCHHHHHHHHHHHHHCTTCHHHHHHHHHHHHH-TTCHHHHHHHHHHHHTCCCTTC
T ss_pred CCCCHHHHHHHHHHHHHhcCCCCCHHHHHHHHHHHHHCcCCHHHHHHHHHHHHH-cCCHHHHHHHHHHHHhhCCCCc
Confidence 68899999999999976555 7999999999999999999999999999988 8999999999999999998853
No 175
>2kat_A Uncharacterized protein; NESG, structure, structural genomics, PSI-2, protein structure initiative; NMR {Bordetella parapertussis}
Probab=99.53 E-value=8e-14 Score=71.09 Aligned_cols=71 Identities=14% Similarity=0.106 Sum_probs=67.1
Q ss_pred hhHHHHHHHHhccCCCCHHHHHHHHHHHHHhcCCHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHhhcccccC
Q psy12719 45 DGAEEYFNRSIRVDPENASLYVHRAMLMLQARGNVDEAIKLIEKAISIDKSCMFAYETLGTIEVQRTFVVLW 116 (116)
Q Consensus 45 ~~A~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~a 116 (116)
.+|+..|++++..+|+++.+++.+|.++.. .|++++|+..+++++..+|+++.++..+|.++...|++++|
T Consensus 2 ~~a~~~~~~al~~~p~~~~~~~~lg~~~~~-~g~~~~A~~~~~~al~~~p~~~~~~~~la~~~~~~g~~~~A 72 (115)
T 2kat_A 2 QAITERLEAMLAQGTDNMLLRFTLGKTYAE-HEQFDAALPHLRAALDFDPTYSVAWKWLGKTLQGQGDRAGA 72 (115)
T ss_dssp CCHHHHHHHHHTTTCCCHHHHHHHHHHHHH-TTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHTCHHHH
T ss_pred hHHHHHHHHHHHhCCCcHHHHHHHHHHHHH-ccCHHHHHHHHHHHHHHCCCcHHHHHHHHHHHHHcCCHHHH
Confidence 468899999999999999999999999888 89999999999999999999999999999999999998764
No 176
>1dce_A Protein (RAB geranylgeranyltransferase alpha subunit); 2.0 A resolution, N-formylmethionine, alpha subunit; HET: FME; 2.00A {Rattus norvegicus} SCOP: a.118.6.1 b.7.4.1 c.10.2.2 PDB: 1ltx_A*
Probab=99.53 E-value=5.1e-13 Score=84.62 Aligned_cols=100 Identities=13% Similarity=0.098 Sum_probs=95.7
Q ss_pred HHHHHHHHHHHHhhCCChhHHHHHHHHHHHhhc--ChhhHHHHHHHHhccCCCCHHHHHHHHHHHHHhcC-CHHHHHHHH
Q psy12719 10 VEQSLKEFRNFVDTHSNVVEACTLFAQVLVDQE--DFDGAEEYFNRSIRVDPENASLYVHRAMLMLQARG-NVDEAIKLI 86 (116)
Q Consensus 10 ~~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~-~~~~a~~~~ 86 (116)
++++++.+++++..+|++..+|...+.+....+ +++++++.+.++++.+|++..+|..++.+... .| .++++++.+
T Consensus 89 ~~~eL~~~~~~l~~~pK~y~aW~hR~w~l~~l~~~~~~~el~~~~k~l~~d~~N~~aW~~R~~~l~~-l~~~~~~el~~~ 167 (567)
T 1dce_A 89 VKAELGFLESCLRVNPKSYGTWHHRCWLLSRLPEPNWARELELCARFLEADERNFHCWDYRRFVAAQ-AAVAPAEELAFT 167 (567)
T ss_dssp HHHHHHHHHHHHHHCTTCHHHHHHHHHHHHTCSSCCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHH-TCCCHHHHHHHH
T ss_pred HHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcccccHHHHHHHHHHHHhhccccccHHHHHHHHHHH-cCCChHHHHHHH
Confidence 899999999999999999999999999999999 67999999999999999999999999999766 78 899999999
Q ss_pred HHHHhcCCCcHHHHHHHHHHHHhh
Q psy12719 87 EKAISIDKSCMFAYETLGTIEVQR 110 (116)
Q Consensus 87 ~~~~~~~~~~~~~~~~l~~~~~~~ 110 (116)
.++++.+|++..+|..++.++...
T Consensus 168 ~~~I~~~p~n~saW~~r~~ll~~l 191 (567)
T 1dce_A 168 DSLITRNFSNYSSWHYRSCLLPQL 191 (567)
T ss_dssp HTTTTTTCCCHHHHHHHHHHHHHH
T ss_pred HHHHHHCCCCccHHHHHHHHHHhh
Confidence 999999999999999999998875
No 177
>1zu2_A Mitochondrial import receptor subunit TOM20-3; TPR, tetratricopeptide repeat like, TPR-like, transport protein; NMR {Arabidopsis thaliana} SCOP: a.118.8.1
Probab=99.53 E-value=1.5e-14 Score=77.42 Aligned_cols=72 Identities=18% Similarity=0.145 Sum_probs=66.2
Q ss_pred HhhcChhhHHHHHHHHhccCCCCHHHHHHHHHHHHHhcCC----------HHHHHHHHHHHHhcCCCcHHHHHHHHHHHH
Q psy12719 39 VDQEDFDGAEEYFNRSIRVDPENASLYVHRAMLMLQARGN----------VDEAIKLIEKAISIDKSCMFAYETLGTIEV 108 (116)
Q Consensus 39 ~~~~~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~----------~~~a~~~~~~~~~~~~~~~~~~~~l~~~~~ 108 (116)
.+.+.+++|+..+++++.++|+++.+|+++|.++.. .++ +++|+..|+++++++|+...+|+++|.+|.
T Consensus 13 ~r~~~feeA~~~~~~Ai~l~P~~aea~~n~G~~l~~-l~~~~~g~~al~~~~eAi~~le~AL~ldP~~~~A~~~LG~ay~ 91 (158)
T 1zu2_A 13 DRILLFEQIRQDAENTYKSNPLDADNLTRWGGVLLE-LSQFHSISDAKQMIQEAITKFEEALLIDPKKDEAVWCIGNAYT 91 (158)
T ss_dssp HHHHHHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHH-HHHHSCHHHHHHHHHHHHHHHHHHHHHCTTCHHHHHHHHHHHH
T ss_pred HHHhHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHH-hcccchhhhhHhHHHHHHHHHHHHHHhCcCcHHHHHHHHHHHH
Confidence 356789999999999999999999999999999777 665 469999999999999999999999999999
Q ss_pred hhc
Q psy12719 109 QRT 111 (116)
Q Consensus 109 ~~~ 111 (116)
.+|
T Consensus 92 ~lg 94 (158)
T 1zu2_A 92 SFA 94 (158)
T ss_dssp HHH
T ss_pred Hhc
Confidence 886
No 178
>3rjv_A Putative SEL1 repeat protein; alpha-alpha superhelix, structural genomics, joint center FO structural genomics, JCSG; HET: MSE; 1.65A {Klebsiella pneumoniae subsp}
Probab=99.53 E-value=8.3e-14 Score=78.21 Aligned_cols=99 Identities=14% Similarity=0.090 Sum_probs=66.8
Q ss_pred cHHHHHHHHHHHHhhCCChhHHHHHHHHHHHh----hcChhhHHHHHHHHhccCC--CCHHHHHHHHHHHHHh---cCCH
Q psy12719 9 RVEQSLKEFRNFVDTHSNVVEACTLFAQVLVD----QEDFDGAEEYFNRSIRVDP--ENASLYVHRAMLMLQA---RGNV 79 (116)
Q Consensus 9 ~~~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~A~~~~~~a~~~~~--~~~~~~~~~~~~~~~~---~~~~ 79 (116)
++++|+.+|+++.+ ++++.++..+|.++.. .+++++|+.+|++++...| .++.+++++|.++... .+++
T Consensus 68 ~~~~A~~~~~~A~~--~g~~~a~~~Lg~~y~~g~g~~~d~~~A~~~~~~A~~~~~~~~~~~a~~~Lg~~y~~g~g~~~d~ 145 (212)
T 3rjv_A 68 DYPQARQLAEKAVE--AGSKSGEIVLARVLVNRQAGATDVAHAITLLQDAARDSESDAAVDAQMLLGLIYASGVHGPEDD 145 (212)
T ss_dssp CHHHHHHHHHHHHH--TTCHHHHHHHHHHHTCGGGSSCCHHHHHHHHHHHTSSTTSHHHHHHHHHHHHHHHHTSSSSCCH
T ss_pred CHHHHHHHHHHHHH--CCCHHHHHHHHHHHHcCCCCccCHHHHHHHHHHHHHcCCCcchHHHHHHHHHHHHcCCCCCCCH
Confidence 67777777777643 3566667777777765 6677777777777777766 3466777777775541 3467
Q ss_pred HHHHHHHHHHHhcCCCcHHHHHHHHHHHHhh
Q psy12719 80 DEAIKLIEKAISIDKSCMFAYETLGTIEVQR 110 (116)
Q Consensus 80 ~~a~~~~~~~~~~~~~~~~~~~~l~~~~~~~ 110 (116)
++|+.+++++++. |.++.++..+|.++...
T Consensus 146 ~~A~~~~~~A~~~-~~~~~a~~~Lg~~y~~g 175 (212)
T 3rjv_A 146 VKASEYFKGSSSL-SRTGYAEYWAGMMFQQG 175 (212)
T ss_dssp HHHHHHHHHHHHT-SCTTHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHc-CCCHHHHHHHHHHHHcC
Confidence 7777777777776 66666777777776553
No 179
>3rjv_A Putative SEL1 repeat protein; alpha-alpha superhelix, structural genomics, joint center FO structural genomics, JCSG; HET: MSE; 1.65A {Klebsiella pneumoniae subsp}
Probab=99.52 E-value=2.9e-13 Score=76.01 Aligned_cols=107 Identities=17% Similarity=0.107 Sum_probs=88.7
Q ss_pred ccchhcHHHHHHHHHHHHhhCCChhHHHHHHHHHHHhhc----ChhhHHHHHHHHhccCCCCHHHHHHHHHHHHHh---c
Q psy12719 4 PGDRERVEQSLKEFRNFVDTHSNVVEACTLFAQVLVDQE----DFDGAEEYFNRSIRVDPENASLYVHRAMLMLQA---R 76 (116)
Q Consensus 4 ~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~~~---~ 76 (116)
+...+++++|+.+|+++++. +++.++..+|.++.. + ++++|+.+|++++. +.++.+++++|.++... .
T Consensus 28 ~~~~~~~~~A~~~~~~a~~~--g~~~a~~~lg~~y~~-~g~~~~~~~A~~~~~~A~~--~g~~~a~~~Lg~~y~~g~g~~ 102 (212)
T 3rjv_A 28 WVSSGDYQKAEYWAQKAAAQ--GDGDALALLAQLKIR-NPQQADYPQARQLAEKAVE--AGSKSGEIVLARVLVNRQAGA 102 (212)
T ss_dssp HHHHTCHHHHHHHHHHHHHT--TCHHHHHHHHHHTTS-STTSCCHHHHHHHHHHHHH--TTCHHHHHHHHHHHTCGGGSS
T ss_pred HhcCCCHHHHHHHHHHHHHc--CCHHHHHHHHHHHHc-CCCCCCHHHHHHHHHHHHH--CCCHHHHHHHHHHHHcCCCCc
Confidence 44578999999999999875 678889999999988 6 89999999999964 56888999999986531 5
Q ss_pred CCHHHHHHHHHHHHhcCC--CcHHHHHHHHHHHHh----hccccc
Q psy12719 77 GNVDEAIKLIEKAISIDK--SCMFAYETLGTIEVQ----RTFVVL 115 (116)
Q Consensus 77 ~~~~~a~~~~~~~~~~~~--~~~~~~~~l~~~~~~----~~~~~~ 115 (116)
+++++|+.+++++.+..| +.+.++..+|.++.. .+++++
T Consensus 103 ~d~~~A~~~~~~A~~~~~~~~~~~a~~~Lg~~y~~g~g~~~d~~~ 147 (212)
T 3rjv_A 103 TDVAHAITLLQDAARDSESDAAVDAQMLLGLIYASGVHGPEDDVK 147 (212)
T ss_dssp CCHHHHHHHHHHHTSSTTSHHHHHHHHHHHHHHHHTSSSSCCHHH
T ss_pred cCHHHHHHHHHHHHHcCCCcchHHHHHHHHHHHHcCCCCCCCHHH
Confidence 799999999999999988 458899999999987 555543
No 180
>3q7a_A Farnesyltransferase alpha subunit; protein prenyltransferase, transferase-transferase inhibitor; HET: SUC 3FX FPP 778; 2.00A {Cryptococcus neoformans} PDB: 3q73_A* 3q78_A* 3q79_A* 3q75_A* 3q7f_A* 3sfx_A* 3sfy_A*
Probab=99.49 E-value=1.4e-12 Score=78.06 Aligned_cols=106 Identities=12% Similarity=0.105 Sum_probs=98.1
Q ss_pred hcHHHHHHHHHHHHhhCCChhHHHHHHHHHHHhhc-ChhhHHHHHHHHhccCCCCHHHHHHHHHHHHHhc-C-CHHHHHH
Q psy12719 8 ERVEQSLKEFRNFVDTHSNVVEACTLFAQVLVDQE-DFDGAEEYFNRSIRVDPENASLYVHRAMLMLQAR-G-NVDEAIK 84 (116)
Q Consensus 8 ~~~~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~~~~-~-~~~~a~~ 84 (116)
+..++|++.+.+++..+|++..+|...+.+....+ .+++++..+..++..+|++..+|..++.++.. . + +++++++
T Consensus 68 e~se~AL~lt~~~L~~nP~~ytaWn~R~~iL~~l~~~l~eEL~~~~~~L~~nPKny~aW~hR~wlL~~-l~~~~~~~EL~ 146 (349)
T 3q7a_A 68 EKSERALELTEIIVRMNPAHYTVWQYRFSLLTSLNKSLEDELRLMNEFAVQNLKSYQVWHHRLLLLDR-ISPQDPVSEIE 146 (349)
T ss_dssp CCSHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHTTCCCHHHHHHHHHHHHH-HCCSCCHHHHH
T ss_pred CCCHHHHHHHHHHHHhCchhHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHhCCCcHHHHHHHHHHHHH-hcCCChHHHHH
Confidence 34578999999999999999999999999999999 59999999999999999999999999999766 5 7 8999999
Q ss_pred HHHHHHhcCCCcHHHHHHHHHHHHhhcccc
Q psy12719 85 LIEKAISIDKSCMFAYETLGTIEVQRTFVV 114 (116)
Q Consensus 85 ~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~ 114 (116)
.+.++++.+|.+..+|...+.+....|.++
T Consensus 147 ~~~k~L~~dpkNy~AW~~R~wvl~~l~~~~ 176 (349)
T 3q7a_A 147 YIHGSLLPDPKNYHTWAYLHWLYSHFSTLG 176 (349)
T ss_dssp HHHHHTSSCTTCHHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHhCCCCHHHHHHHHHHHHHhcccc
Confidence 999999999999999999999998887765
No 181
>3q15_A PSP28, response regulator aspartate phosphatase H; tetratricopeptide repeat, 3-helix bundle, phosphorelay signa transduction, phosphatase; 2.19A {Bacillus subtilis}
Probab=99.49 E-value=1.7e-13 Score=82.61 Aligned_cols=90 Identities=13% Similarity=0.135 Sum_probs=79.9
Q ss_pred cccchhcHHHHHHHHHHHHhhCCC------hhHHHHHHHHHHHhhcChhhHHHHHHHHhc-----cCCCCHHHHHHHHHH
Q psy12719 3 VPGDRERVEQSLKEFRNFVDTHSN------VVEACTLFAQVLVDQEDFDGAEEYFNRSIR-----VDPENASLYVHRAML 71 (116)
Q Consensus 3 ~~~~~~~~~~A~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~A~~~~~~a~~-----~~~~~~~~~~~~~~~ 71 (116)
++...|++++|++.+.+++...+. ...++.++|.++...|++++|+.++++++. .+|..+.++..+|.+
T Consensus 191 ~y~~~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~lg~~y~~~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~la~~ 270 (378)
T 3q15_A 191 NYDDFKHYDKALPHLEAALELAMDIQNDRFIAISLLNIANSYDRSGDDQMAVEHFQKAAKVSREKVPDLLPKVLFGLSWT 270 (378)
T ss_dssp HHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHCGGGHHHHHHHHHHH
T ss_pred HHHHhCCHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHhhCChhHHHHHHHHHHH
Confidence 356789999999999999987432 246889999999999999999999999999 788888999999999
Q ss_pred HHHhcCCHHHHHHHHHHHHhcC
Q psy12719 72 MLQARGNVDEAIKLIEKAISID 93 (116)
Q Consensus 72 ~~~~~~~~~~a~~~~~~~~~~~ 93 (116)
+.. .|++++|...+++++...
T Consensus 271 ~~~-~g~~~~A~~~~~~al~~~ 291 (378)
T 3q15_A 271 LCK-AGQTQKAFQFIEEGLDHI 291 (378)
T ss_dssp HHH-TTCHHHHHHHHHHHHHHC
T ss_pred HHH-CCCHHHHHHHHHHHHHHH
Confidence 888 899999999999999874
No 182
>1hz4_A MALT regulatory protein; two-helix bundles, helix repeats, protein superhelix, transc activator; 1.45A {Escherichia coli} SCOP: a.118.8.2
Probab=99.47 E-value=2.7e-13 Score=81.41 Aligned_cols=110 Identities=16% Similarity=0.064 Sum_probs=68.9
Q ss_pred cchhcHHHHHHHHHHHHhhCCChh------HHHHHHHHHHHhhcChhhHHHHHHHHhccC--------CCCHHHHHHHHH
Q psy12719 5 GDRERVEQSLKEFRNFVDTHSNVV------EACTLFAQVLVDQEDFDGAEEYFNRSIRVD--------PENASLYVHRAM 70 (116)
Q Consensus 5 ~~~~~~~~A~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~A~~~~~~a~~~~--------~~~~~~~~~~~~ 70 (116)
...|++++|+..+++++...|... .++..+|.++...|++++|+..+++++... |....++..+|.
T Consensus 64 ~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~la~~~~~~G~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~la~ 143 (373)
T 1hz4_A 64 HCKGELTRSLALMQQTEQMARQHDVWHYALWSLIQQSEILFAQGFLQTAWETQEKAFQLINEQHLEQLPMHEFLVRIRAQ 143 (373)
T ss_dssp HHHTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCTTSTHHHHHHHHHHH
T ss_pred HhcCcHHHHHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHhccccCcHHHHHHHHHHH
Confidence 345667777777777766554332 234566777777777777777777766543 223445666777
Q ss_pred HHHHhcCCHHHHHHHHHHHHhcCCC-----cHHHHHHHHHHHHhhccccc
Q psy12719 71 LMLQARGNVDEAIKLIEKAISIDKS-----CMFAYETLGTIEVQRTFVVL 115 (116)
Q Consensus 71 ~~~~~~~~~~~a~~~~~~~~~~~~~-----~~~~~~~l~~~~~~~~~~~~ 115 (116)
+++. .|++++|...+.+++...+. ...++..++.++...|++++
T Consensus 144 ~~~~-~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~la~~~~~~g~~~~ 192 (373)
T 1hz4_A 144 LLWA-WARLDEAEASARSGIEVLSSYQPQQQLQCLAMLIQCSLARGDLDN 192 (373)
T ss_dssp HHHH-TTCHHHHHHHHHHHHHHTTTSCGGGGHHHHHHHHHHHHHHTCHHH
T ss_pred HHHH-hcCHHHHHHHHHHHHHHhhccCcHHHHHHHHHHHHHHHHcCCHHH
Confidence 7666 67777777777777766543 23456667777777776654
No 183
>3dss_A Geranylgeranyl transferase type-2 subunit alpha; protein prenylation, metal-binding, prenyltransferase, zinc, phosphoprotein; 1.80A {Rattus norvegicus} PDB: 3dst_A* 3dsu_A* 3dsv_A* 3dsw_A* 3dsx_A* 3hxb_A* 3hxc_A* 3hxd_A* 3hxe_A* 3hxf_A* 3pz1_A* 3pz2_A* 3pz3_A* 3c72_A* 4gtv_A* 4gts_A* 4ehm_A* 4gtt_A*
Probab=99.47 E-value=3.7e-12 Score=75.85 Aligned_cols=100 Identities=13% Similarity=0.093 Sum_probs=94.0
Q ss_pred HHHHHHHHHHHHhhCCChhHHHHHHHHHHHhhcC--hhhHHHHHHHHhccCCCCHHHHHHHHHHHHHhcCC-HHHHHHHH
Q psy12719 10 VEQSLKEFRNFVDTHSNVVEACTLFAQVLVDQED--FDGAEEYFNRSIRVDPENASLYVHRAMLMLQARGN-VDEAIKLI 86 (116)
Q Consensus 10 ~~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~-~~~a~~~~ 86 (116)
+++++..+..++..+|.+..+|...+.+....++ +++++.++.+++..+|.+..+|..++.+... .|. ++++++.+
T Consensus 90 l~~EL~~~~~~L~~~PKny~aW~hR~wlL~~l~~~~~~~EL~~~~k~l~~dprNy~AW~~R~~vl~~-l~~~~~eel~~~ 168 (331)
T 3dss_A 90 VKAELGFLESCLRVNPKSYGTWHHRCWLLSRLPEPNWARELELCARFLEADERNFHCWDYRRFVAAQ-AAVAPAEELAFT 168 (331)
T ss_dssp HHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHCSSCCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHH-TTCCHHHHHHHH
T ss_pred HHHHHHHHHHHHHhCCCCHHHHHHHHHHHhccCcccHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHH-hCcCHHHHHHHH
Confidence 7899999999999999999999999999998884 8999999999999999999999999999666 788 69999999
Q ss_pred HHHHhcCCCcHHHHHHHHHHHHhh
Q psy12719 87 EKAISIDKSCMFAYETLGTIEVQR 110 (116)
Q Consensus 87 ~~~~~~~~~~~~~~~~l~~~~~~~ 110 (116)
.+++..+|++..+|..++.+....
T Consensus 169 ~~~I~~~p~N~SAW~~R~~ll~~l 192 (331)
T 3dss_A 169 DSLITRNFSNYSSWHYRSCLLPQL 192 (331)
T ss_dssp HHHHHHCSCCHHHHHHHHHHHHHH
T ss_pred HHHHHHCCCCHHHHHHHHHHHHHh
Confidence 999999999999999999998776
No 184
>1hz4_A MALT regulatory protein; two-helix bundles, helix repeats, protein superhelix, transc activator; 1.45A {Escherichia coli} SCOP: a.118.8.2
Probab=99.44 E-value=4.8e-13 Score=80.32 Aligned_cols=112 Identities=8% Similarity=0.042 Sum_probs=93.2
Q ss_pred ccchhcHHHHHHHHHHHHhhCCChh-----HHHHHHHHHHHhhcChhhHHHHHHHHhccCCCC------HHHHHHHHHHH
Q psy12719 4 PGDRERVEQSLKEFRNFVDTHSNVV-----EACTLFAQVLVDQEDFDGAEEYFNRSIRVDPEN------ASLYVHRAMLM 72 (116)
Q Consensus 4 ~~~~~~~~~A~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~A~~~~~~a~~~~~~~------~~~~~~~~~~~ 72 (116)
+...|++++|+..+++++...|... .++..+|.++...|++++|...+++++...|.. ..++..+|.++
T Consensus 24 ~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~la~~~ 103 (373)
T 1hz4_A 24 AINDGNPDEAERLAKLALEELPPGWFYSRIVATSVLGEVLHCKGELTRSLALMQQTEQMARQHDVWHYALWSLIQQSEIL 103 (373)
T ss_dssp HHHTTCHHHHHHHHHHHHHTCCTTCHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHH
T ss_pred HHHCCCHHHHHHHHHHHHHcCCCCchhHHHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHH
Confidence 3457899999999999999887653 267889999999999999999999999876543 23477899998
Q ss_pred HHhcCCHHHHHHHHHHHHhcC--------CCcHHHHHHHHHHHHhhcccccC
Q psy12719 73 LQARGNVDEAIKLIEKAISID--------KSCMFAYETLGTIEVQRTFVVLW 116 (116)
Q Consensus 73 ~~~~~~~~~a~~~~~~~~~~~--------~~~~~~~~~l~~~~~~~~~~~~a 116 (116)
.. .|++++|+..+++++... |....++..+|.++...|++++|
T Consensus 104 ~~-~G~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A 154 (373)
T 1hz4_A 104 FA-QGFLQTAWETQEKAFQLINEQHLEQLPMHEFLVRIRAQLLWAWARLDEA 154 (373)
T ss_dssp HH-TTCHHHHHHHHHHHHHHHHHTTCTTSTHHHHHHHHHHHHHHHTTCHHHH
T ss_pred HH-CCCHHHHHHHHHHHHHHHHHhccccCcHHHHHHHHHHHHHHHhcCHHHH
Confidence 87 899999999999999864 34456788899999999998764
No 185
>1klx_A Cysteine rich protein B; structural genomics, helix-turn-helix, right handed super helix, modular structure', hydrolase; 1.95A {Helicobacter pylori} SCOP: a.118.18.1
Probab=99.43 E-value=8.1e-12 Score=65.82 Aligned_cols=101 Identities=9% Similarity=0.092 Sum_probs=80.1
Q ss_pred hhcHHHHHHHHHHHHhhCCChhHHHHHHHHHHHhhcChhhHHHHHHHHhccCCCCHHHHHHHHHHHHHh---cCCHHHHH
Q psy12719 7 RERVEQSLKEFRNFVDTHSNVVEACTLFAQVLVDQEDFDGAEEYFNRSIRVDPENASLYVHRAMLMLQA---RGNVDEAI 83 (116)
Q Consensus 7 ~~~~~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~~~---~~~~~~a~ 83 (116)
.+++++|+++|+++.+..+. .+. +|.++...+.+++|+.+|+++.+. .++.+.+++|.+|... .+++++|+
T Consensus 8 ~~d~~~A~~~~~~aa~~g~~--~a~--lg~~y~~g~~~~~A~~~~~~Aa~~--g~~~a~~~Lg~~y~~G~g~~~d~~~A~ 81 (138)
T 1klx_A 8 KKDLKKAIQYYVKACELNEM--FGC--LSLVSNSQINKQKLFQYLSKACEL--NSGNGCRFLGDFYENGKYVKKDLRKAA 81 (138)
T ss_dssp HHHHHHHHHHHHHHHHTTCT--THH--HHHHTCTTSCHHHHHHHHHHHHHT--TCHHHHHHHHHHHHHCSSSCCCHHHHH
T ss_pred ccCHHHHHHHHHHHHcCCCH--hhh--HHHHHHcCCCHHHHHHHHHHHHcC--CCHHHHHHHHHHHHcCCCCCccHHHHH
Confidence 46788999999999887633 333 888888888888899999998876 6788889999986652 47899999
Q ss_pred HHHHHHHhcCCCcHHHHHHHHHHHHh----hccccc
Q psy12719 84 KLIEKAISIDKSCMFAYETLGTIEVQ----RTFVVL 115 (116)
Q Consensus 84 ~~~~~~~~~~~~~~~~~~~l~~~~~~----~~~~~~ 115 (116)
++++++.+. .++.+..++|.++.. .+++++
T Consensus 82 ~~~~~Aa~~--g~~~a~~~Lg~~y~~G~g~~~d~~~ 115 (138)
T 1klx_A 82 QYYSKACGL--NDQDGCLILGYKQYAGKGVVKNEKQ 115 (138)
T ss_dssp HHHHHHHHT--TCHHHHHHHHHHHHHTSSSCCCHHH
T ss_pred HHHHHHHcC--CCHHHHHHHHHHHHCCCCCCcCHHH
Confidence 999998876 667888899998887 555543
No 186
>2v5f_A Prolyl 4-hydroxylase subunit alpha-1; endoplasmic reticulum, metal-binding, oxidoreductase; 2.03A {Homo sapiens} PDB: 1tjc_A
Probab=99.43 E-value=7.8e-12 Score=62.87 Aligned_cols=81 Identities=21% Similarity=0.306 Sum_probs=69.9
Q ss_pred hhHHHHHHHHHHHhhcChhhHHHHHHHHhccC-------CCCHHHHHHHHHHHHHhcCCHHHHHHHHHHHHhcCCCcHHH
Q psy12719 27 VVEACTLFAQVLVDQEDFDGAEEYFNRSIRVD-------PENASLYVHRAMLMLQARGNVDEAIKLIEKAISIDKSCMFA 99 (116)
Q Consensus 27 ~~~~~~~~~~~~~~~~~~~~A~~~~~~a~~~~-------~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~ 99 (116)
++.-.+.+|..++..++|..|+.+|+.+++.. +..+.++..+|.++++ +|+++.|+..+++++...|+++.+
T Consensus 4 sa~dc~~lG~~~~~~~~y~~A~~W~~~Al~~~~~~~~~~~~~~~i~~~L~~~~~~-~g~~~~A~~~~~~al~l~P~~~~~ 82 (104)
T 2v5f_A 4 TAEDCFELGKVAYTEADYYHTELWMEQALRQLDEGEISTIDKVSVLDYLSYAVYQ-QGDLDKALLLTKKLLELDPEHQRA 82 (104)
T ss_dssp CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHTTCCCSSCHHHHHHHHHHHHHH-TTCHHHHHHHHHHHHHHCTTCHHH
T ss_pred CHHHHHHHHHHHHHccchHHHHHHHHHHHHhhhccCCCcccHHHHHHHHHHHHHH-ccCHHHHHHHHHHHHhcCCCCHHH
Confidence 34567899999999999999999999999853 3457789999999888 999999999999999999999998
Q ss_pred HHHHHHHHH
Q psy12719 100 YETLGTIEV 108 (116)
Q Consensus 100 ~~~l~~~~~ 108 (116)
..+++....
T Consensus 83 ~~n~~~~~~ 91 (104)
T 2v5f_A 83 NGNLKYFEY 91 (104)
T ss_dssp HHHHHHHHH
T ss_pred HhhHHHHHH
Confidence 888875443
No 187
>3e4b_A ALGK; tetratricopeptide repeat, superhelix, alginate biosynt pseudomonas, protein binding; 2.50A {Pseudomonas fluorescens}
Probab=99.42 E-value=3.2e-12 Score=79.01 Aligned_cols=95 Identities=20% Similarity=0.229 Sum_probs=60.7
Q ss_pred cHHHHHHHHHHHHhhCCChhHHHHHHHHHHHhh----cChhhHHHHHHHHhccCCCCHHHHHHHHHHHH--HhcCCHHHH
Q psy12719 9 RVEQSLKEFRNFVDTHSNVVEACTLFAQVLVDQ----EDFDGAEEYFNRSIRVDPENASLYVHRAMLML--QARGNVDEA 82 (116)
Q Consensus 9 ~~~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~--~~~~~~~~a 82 (116)
++++|+.+|+++....|.....++.+|.++... +++++|+.+|+++. |.++.+++++|.+++ ...+++++|
T Consensus 194 ~~~~A~~~~~~aa~~g~~~a~~~~~Lg~~y~~g~~~~~d~~~A~~~~~~aa---~g~~~a~~~Lg~~~~~~~~~~d~~~A 270 (452)
T 3e4b_A 194 QQAELLKQMEAGVSRGTVTAQRVDSVARVLGDATLGTPDEKTAQALLEKIA---PGYPASWVSLAQLLYDFPELGDVEQM 270 (452)
T ss_dssp HHHHHHHHHHHHHHTTCSCHHHHHHHHHHHTCGGGSSCCHHHHHHHHHHHG---GGSTHHHHHHHHHHHHSGGGCCHHHH
T ss_pred cHHHHHHHHHHHHHCCCHHHHHHHHHHHHHhCCCCCCCCHHHHHHHHHHHc---CCCHHHHHHHHHHHHhCCCCCCHHHH
Confidence 666777777777766666666666666666544 56666777776666 666666666666643 225666666
Q ss_pred HHHHHHHHhcCCCcHHHHHHHHHHHH
Q psy12719 83 IKLIEKAISIDKSCMFAYETLGTIEV 108 (116)
Q Consensus 83 ~~~~~~~~~~~~~~~~~~~~l~~~~~ 108 (116)
+.+++++.+. +++.+++.+|.++.
T Consensus 271 ~~~~~~Aa~~--g~~~A~~~Lg~~y~ 294 (452)
T 3e4b_A 271 MKYLDNGRAA--DQPRAELLLGKLYY 294 (452)
T ss_dssp HHHHHHHHHT--TCHHHHHHHHHHHH
T ss_pred HHHHHHHHHC--CCHHHHHHHHHHHH
Confidence 6666666643 35566666666665
No 188
>4f3v_A ESX-1 secretion system protein ECCA1; tetratricopeptide repeat, TPR domain, ATPase, protein secret protein transport; 2.00A {Mycobacterium tuberculosis}
Probab=99.42 E-value=3.5e-12 Score=74.31 Aligned_cols=101 Identities=16% Similarity=0.080 Sum_probs=85.2
Q ss_pred cccchhcHHHHHHHHHHHHhhCCCh--hHHHHHHHHHHHhhcChhhHHHHHHHHhccC--CC-CHHHHHHHHHHHHHhcC
Q psy12719 3 VPGDRERVEQSLKEFRNFVDTHSNV--VEACTLFAQVLVDQEDFDGAEEYFNRSIRVD--PE-NASLYVHRAMLMLQARG 77 (116)
Q Consensus 3 ~~~~~~~~~~A~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~A~~~~~~a~~~~--~~-~~~~~~~~~~~~~~~~~ 77 (116)
++.+.++|++|+..|+++....+.. ..+++.+|.++...|++++|+.+|++++... |. .+.+++.+|.++.. +|
T Consensus 144 l~~~~~r~~dA~~~l~~a~~~~d~~~~~~a~~~LG~al~~LG~~~eAl~~l~~a~~g~~~P~~~~da~~~~glaL~~-lG 222 (282)
T 4f3v_A 144 VYGAAERWTDVIDQVKSAGKWPDKFLAGAAGVAHGVAAANLALFTEAERRLTEANDSPAGEACARAIAWYLAMARRS-QG 222 (282)
T ss_dssp HHHHTTCHHHHHHHHTTGGGCSCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHTSTTTTTTHHHHHHHHHHHHHH-HT
T ss_pred HHHHcCCHHHHHHHHHHhhccCCcccHHHHHHHHHHHHHHCCCHHHHHHHHHHHhcCCCCccccHHHHHHHHHHHHH-cC
Confidence 3567899999999999887653222 4589999999999999999999999998654 65 56799999999777 99
Q ss_pred CHHHHHHHHHHHHhcCCCcHHHHHHHHH
Q psy12719 78 NVDEAIKLIEKAISIDKSCMFAYETLGT 105 (116)
Q Consensus 78 ~~~~a~~~~~~~~~~~~~~~~~~~~l~~ 105 (116)
+.++|...|++++..+|+ +.++..|..
T Consensus 223 r~deA~~~l~~a~a~~P~-~~~~~aL~~ 249 (282)
T 4f3v_A 223 NESAAVALLEWLQTTHPE-PKVAAALKD 249 (282)
T ss_dssp CHHHHHHHHHHHHHHSCC-HHHHHHHHC
T ss_pred CHHHHHHHHHHHHhcCCc-HHHHHHHhC
Confidence 999999999999999999 777766643
No 189
>3dss_A Geranylgeranyl transferase type-2 subunit alpha; protein prenylation, metal-binding, prenyltransferase, zinc, phosphoprotein; 1.80A {Rattus norvegicus} PDB: 3dst_A* 3dsu_A* 3dsv_A* 3dsw_A* 3dsx_A* 3hxb_A* 3hxc_A* 3hxd_A* 3hxe_A* 3hxf_A* 3pz1_A* 3pz2_A* 3pz3_A* 3c72_A* 4gtv_A* 4gts_A* 4ehm_A* 4gtt_A*
Probab=99.41 E-value=1.8e-11 Score=72.91 Aligned_cols=104 Identities=14% Similarity=0.249 Sum_probs=94.5
Q ss_pred hcH-HHHHHHHHHHHhhCCChhHHHHHHHHHHHhhcC----------hhhHHHHHHHHhccCCCCHHHHHHHHHHHHHhc
Q psy12719 8 ERV-EQSLKEFRNFVDTHSNVVEACTLFAQVLVDQED----------FDGAEEYFNRSIRVDPENASLYVHRAMLMLQAR 76 (116)
Q Consensus 8 ~~~-~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~~~~ 76 (116)
|++ ++|+..+.+++..+|++..+|...+.+....+. +++++..+..++..+|.+..+|..++.++.. .
T Consensus 43 ~e~s~eaL~~t~~~L~~nP~~ytaWn~Rr~iL~~l~~~~~~~~~~~~l~~EL~~~~~~L~~~PKny~aW~hR~wlL~~-l 121 (331)
T 3dss_A 43 GELDESVLELTSQILGANPDFATLWNCRREVLQHLETEKSPEESAALVKAELGFLESCLRVNPKSYGTWHHRCWLLSR-L 121 (331)
T ss_dssp TCCSHHHHHHHHHHHTTCTTCHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHH-C
T ss_pred CCCCHHHHHHHHHHHHHCchhHHHHHHHHHHHHHhcccccchhhhHHHHHHHHHHHHHHHhCCCCHHHHHHHHHHHhc-c
Confidence 444 479999999999999999999999999887766 6899999999999999999999999999666 7
Q ss_pred C--CHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHhhcc
Q psy12719 77 G--NVDEAIKLIEKAISIDKSCMFAYETLGTIEVQRTF 112 (116)
Q Consensus 77 ~--~~~~a~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~ 112 (116)
+ .+++++..+.++++.+|.+..+|...+.+....|.
T Consensus 122 ~~~~~~~EL~~~~k~l~~dprNy~AW~~R~~vl~~l~~ 159 (331)
T 3dss_A 122 PEPNWARELELCARFLEADERNFHCWDYRRFVAAQAAV 159 (331)
T ss_dssp SSCCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTC
T ss_pred CcccHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHhCc
Confidence 7 48999999999999999999999999999888776
No 190
>3q7a_A Farnesyltransferase alpha subunit; protein prenyltransferase, transferase-transferase inhibitor; HET: SUC 3FX FPP 778; 2.00A {Cryptococcus neoformans} PDB: 3q73_A* 3q78_A* 3q79_A* 3q75_A* 3q7f_A* 3sfx_A* 3sfy_A*
Probab=99.39 E-value=8.1e-12 Score=74.80 Aligned_cols=105 Identities=15% Similarity=0.116 Sum_probs=96.8
Q ss_pred hh-cHHHHHHHHHHHHhhCCChhHHHHHHHHHHHhh-c-ChhhHHHHHHHHhccCCCCHHHHHHHHHHHHHhcCCHH---
Q psy12719 7 RE-RVEQSLKEFRNFVDTHSNVVEACTLFAQVLVDQ-E-DFDGAEEYFNRSIRVDPENASLYVHRAMLMLQARGNVD--- 80 (116)
Q Consensus 7 ~~-~~~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~-~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~--- 80 (116)
.+ .+++++..++.++..+|++..+|...+.+.... + ++++++..+.+++..+|++..+|..++.+... .+.++
T Consensus 101 l~~~l~eEL~~~~~~L~~nPKny~aW~hR~wlL~~l~~~~~~~EL~~~~k~L~~dpkNy~AW~~R~wvl~~-l~~~~~~~ 179 (349)
T 3q7a_A 101 LNKSLEDELRLMNEFAVQNLKSYQVWHHRLLLLDRISPQDPVSEIEYIHGSLLPDPKNYHTWAYLHWLYSH-FSTLGRIS 179 (349)
T ss_dssp TTCCHHHHHHHHHHHHHTTCCCHHHHHHHHHHHHHHCCSCCHHHHHHHHHHTSSCTTCHHHHHHHHHHHHH-HHHTTCCC
T ss_pred hhhhHHHHHHHHHHHHHhCCCcHHHHHHHHHHHHHhcCCChHHHHHHHHHHHHhCCCCHHHHHHHHHHHHH-hccccccc
Confidence 34 589999999999999999999999999999887 7 89999999999999999999999999999655 67776
Q ss_pred -----HHHHHHHHHHhcCCCcHHHHHHHHHHHHhhcc
Q psy12719 81 -----EAIKLIEKAISIDKSCMFAYETLGTIEVQRTF 112 (116)
Q Consensus 81 -----~a~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~ 112 (116)
++++.+.++++.+|.+..+|...+.+....++
T Consensus 180 ~~~~~eELe~~~k~I~~dp~N~SAW~~R~~lL~~l~~ 216 (349)
T 3q7a_A 180 EAQWGSELDWCNEMLRVDGRNNSAWGWRWYLRVSRPG 216 (349)
T ss_dssp HHHHHHHHHHHHHHHHHCTTCHHHHHHHHHHHTTSTT
T ss_pred hhhHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHhccc
Confidence 99999999999999999999999999888765
No 191
>3qww_A SET and MYND domain-containing protein 2; methyltransferase, HSP90, transferase-transferase inhibitor; HET: SFG; 1.80A {Mus musculus} PDB: 3qwv_A* 3s7d_A* 3s7b_A* 3s7f_A* 3s7j_A* 3tg4_A* 3tg5_A* 3rib_A*
Probab=99.38 E-value=7.1e-12 Score=77.14 Aligned_cols=94 Identities=18% Similarity=0.168 Sum_probs=77.7
Q ss_pred chhcHHHHHHHHHHHHhhC-----CCh---hHHHHHHHHHHHhhcChhhHHHHHHHHhcc-----CCCC---HHHHHHHH
Q psy12719 6 DRERVEQSLKEFRNFVDTH-----SNV---VEACTLFAQVLVDQEDFDGAEEYFNRSIRV-----DPEN---ASLYVHRA 69 (116)
Q Consensus 6 ~~~~~~~A~~~~~~~~~~~-----~~~---~~~~~~~~~~~~~~~~~~~A~~~~~~a~~~-----~~~~---~~~~~~~~ 69 (116)
..|+|++|+..++++++.. |++ ..++.++|.+|..+|+|++|+.++++++.+ .|++ ...+.++|
T Consensus 310 ~~g~~~eA~~~~~~~L~i~~~~lg~~Hp~~a~~~~nLa~~y~~~g~~~eA~~~~~~aL~i~~~~lG~~Hp~~a~~l~nLa 389 (433)
T 3qww_A 310 HYKSPSELLEICELSQEKMSSVFEDSNVYMLHMMYQAMGVCLYMQDWEGALKYGQKIIKPYSKHYPVYSLNVASMWLKLG 389 (433)
T ss_dssp TTSCHHHHHHHHHHHHHHHTTTBCTTSHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHSCSSCHHHHHHHHHHH
T ss_pred hccCHHHHHHHHHHHHHHhhCccChhchHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHHcCCCChHHHHHHHHHH
Confidence 4578999999999998753 454 457889999999999999999999999865 3444 55789999
Q ss_pred HHHHHhcCCHHHHHHHHHHHHhc-----CCCcHHHH
Q psy12719 70 MLMLQARGNVDEAIKLIEKAISI-----DKSCMFAY 100 (116)
Q Consensus 70 ~~~~~~~~~~~~a~~~~~~~~~~-----~~~~~~~~ 100 (116)
.+|.. +|++++|+..+++++++ .|++|.+.
T Consensus 390 ~~~~~-qg~~~eA~~~~~~Al~i~~~~lG~~Hp~~~ 424 (433)
T 3qww_A 390 RLYMG-LENKAAGEKALKKAIAIMEVAHGKDHPYIS 424 (433)
T ss_dssp HHHHH-TTCHHHHHHHHHHHHHHHHHHTCTTCHHHH
T ss_pred HHHHh-ccCHHHHHHHHHHHHHHHHHHcCCCChHHH
Confidence 99887 99999999999999975 56666543
No 192
>3qwp_A SET and MYND domain-containing protein 3; SMYD3,SET and MYND domain, zinc finger MYND domain-containin 1, structural genomics; HET: SAM; 1.53A {Homo sapiens} PDB: 3mek_A* 3oxg_A* 3oxf_A* 3pdn_A* 3oxl_A* 3ru0_A*
Probab=99.37 E-value=4.8e-12 Score=77.85 Aligned_cols=105 Identities=13% Similarity=0.091 Sum_probs=83.8
Q ss_pred cchhcHHHHHHHHHHHHhhC-----CCh---hHHHHHHHHHHHhhcChhhHHHHHHHHhcc-----CCCC---HHHHHHH
Q psy12719 5 GDRERVEQSLKEFRNFVDTH-----SNV---VEACTLFAQVLVDQEDFDGAEEYFNRSIRV-----DPEN---ASLYVHR 68 (116)
Q Consensus 5 ~~~~~~~~A~~~~~~~~~~~-----~~~---~~~~~~~~~~~~~~~~~~~A~~~~~~a~~~-----~~~~---~~~~~~~ 68 (116)
..+|+|++|++.++++++.. |++ ..++.++|.+|..+|+|++|+.++++++.+ .|++ ...++++
T Consensus 298 ~~~g~~~~a~~~~~~~L~~~~~~lg~~h~~~~~~~~~L~~~y~~~g~~~eA~~~~~~~L~i~~~~lg~~Hp~~a~~l~nL 377 (429)
T 3qwp_A 298 KAHWKWEQVLAMCQAIISSNSERLPDINIYQLKVLDCAMDACINLGLLEEALFYGTRTMEPYRIFFPGSHPVRGVQVMKV 377 (429)
T ss_dssp HHTTCHHHHHHHHHHHHTCSSCCCCTTSHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHSCSSCHHHHHHHHHH
T ss_pred HhhccHHHHHHHHHHHHHhccCcCCccchHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHhHHHHcCCCChHHHHHHHHH
Confidence 45789999999999999763 444 457889999999999999999999999865 3444 4568999
Q ss_pred HHHHHHhcCCHHHHHHHHHHHHhc-----CCCcH---HHHHHHHHHHHhh
Q psy12719 69 AMLMLQARGNVDEAIKLIEKAISI-----DKSCM---FAYETLGTIEVQR 110 (116)
Q Consensus 69 ~~~~~~~~~~~~~a~~~~~~~~~~-----~~~~~---~~~~~l~~~~~~~ 110 (116)
|.+|.. +|++++|+..+++++++ .|++| .+..+++.+...+
T Consensus 378 a~~~~~-~g~~~eA~~~~~~Al~i~~~~lG~~Hp~~~~~~~~l~~~~~e~ 426 (429)
T 3qwp_A 378 GKLQLH-QGMFPQAMKNLRLAFDIMRVTHGREHSLIEDLILLLEECDANI 426 (429)
T ss_dssp HHHHHH-TTCHHHHHHHHHHHHHHHHHHTCTTSHHHHHHHHHHHHHHHHH
T ss_pred HHHHHh-cCCHHHHHHHHHHHHHHHHHhcCCCChHHHHHHHHHHHHHHHH
Confidence 999888 99999999999999975 45554 4555666666543
No 193
>3ma5_A Tetratricopeptide repeat domain protein; NESG, structural genomics, PSI-2, protein structure initiative; 2.80A {Salinibacter ruber} PDB: 2kcl_A 2kcv_A
Probab=99.36 E-value=2.7e-12 Score=63.99 Aligned_cols=59 Identities=22% Similarity=0.179 Sum_probs=53.6
Q ss_pred cCCCCHHHHHHHHHHHHHhcCCHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHhhcccccC
Q psy12719 57 VDPENASLYVHRAMLMLQARGNVDEAIKLIEKAISIDKSCMFAYETLGTIEVQRTFVVLW 116 (116)
Q Consensus 57 ~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~a 116 (116)
.+|+++.+++.+|.+++. .|++++|+..++++++.+|+++.+|..+|.++...|++++|
T Consensus 2 ~~p~~~~~~~~lg~~~~~-~g~~~~A~~~~~~al~~~p~~~~a~~~lg~~~~~~g~~~~A 60 (100)
T 3ma5_A 2 EDPEDPFTRYALAQEHLK-HDNASRALALFEELVETDPDYVGTYYHLGKLYERLDRTDDA 60 (100)
T ss_dssp ---CCHHHHHHHHHHHHH-TTCHHHHHHHHHHHHHHSTTCTHHHHHHHHHHHHTTCHHHH
T ss_pred CCccCHHHHHHHHHHHHH-cCCHHHHHHHHHHHHHhCCCcHHHHHHHHHHHHHcCCHHHH
Confidence 479999999999999888 89999999999999999999999999999999999998764
No 194
>3ro3_A PINS homolog, G-protein-signaling modulator 2; asymmetric cell division, protein binding; 1.10A {Mus musculus}
Probab=99.31 E-value=5.9e-12 Score=66.84 Aligned_cols=92 Identities=14% Similarity=0.204 Sum_probs=77.0
Q ss_pred cccchhcHHHHHHHHHHHHhhCCCh------hHHHHHHHHHHHhhcChhhHHHHHHHHhccCCC------CHHHHHHHHH
Q psy12719 3 VPGDRERVEQSLKEFRNFVDTHSNV------VEACTLFAQVLVDQEDFDGAEEYFNRSIRVDPE------NASLYVHRAM 70 (116)
Q Consensus 3 ~~~~~~~~~~A~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~A~~~~~~a~~~~~~------~~~~~~~~~~ 70 (116)
.+...|++++|++.+++++...+.. ..++..+|.++...|++++|+.++++++...+. ...++..+|.
T Consensus 58 ~~~~~g~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~la~ 137 (164)
T 3ro3_A 58 AYIFLGEFETASEYYKKTLLLARQLKDRAVEAQSCYSLGNTYTLLQDYEKAIDYHLKHLAIAQELKDRIGEGRACWSLGN 137 (164)
T ss_dssp HHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred HHHHcCCHHHHHHHHHHHHHHHHHhCCcHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHccchHhHHHHHHHHHH
Confidence 3456899999999999999876543 567889999999999999999999999876432 2557889999
Q ss_pred HHHHhcCCHHHHHHHHHHHHhcCCC
Q psy12719 71 LMLQARGNVDEAIKLIEKAISIDKS 95 (116)
Q Consensus 71 ~~~~~~~~~~~a~~~~~~~~~~~~~ 95 (116)
++.. .|++++|...++++++....
T Consensus 138 ~~~~-~g~~~~A~~~~~~a~~~~~~ 161 (164)
T 3ro3_A 138 AYTA-LGNHDQAMHFAEKHLEISRE 161 (164)
T ss_dssp HHHH-HTCHHHHHHHHHHHHHHHTT
T ss_pred HHHH-ccCHHHHHHHHHHHHHHHHH
Confidence 9888 89999999999999876543
No 195
>3e4b_A ALGK; tetratricopeptide repeat, superhelix, alginate biosynt pseudomonas, protein binding; 2.50A {Pseudomonas fluorescens}
Probab=99.31 E-value=3.8e-11 Score=74.24 Aligned_cols=92 Identities=15% Similarity=0.149 Sum_probs=60.8
Q ss_pred hcHHHHHHHHHHHHhhCCChhHHHHHHHHH-H--HhhcChhhHHHHHHHHhccCCCCHHHHHHHHHHHHHhcC-----CH
Q psy12719 8 ERVEQSLKEFRNFVDTHSNVVEACTLFAQV-L--VDQEDFDGAEEYFNRSIRVDPENASLYVHRAMLMLQARG-----NV 79 (116)
Q Consensus 8 ~~~~~A~~~~~~~~~~~~~~~~~~~~~~~~-~--~~~~~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~-----~~ 79 (116)
+++++|+.+|+++. |+++.+++.+|.+ + ...+++++|+.+|+++... .++.+++++|.++.. | ++
T Consensus 231 ~d~~~A~~~~~~aa---~g~~~a~~~Lg~~~~~~~~~~d~~~A~~~~~~Aa~~--g~~~A~~~Lg~~y~~--G~g~~~d~ 303 (452)
T 3e4b_A 231 PDEKTAQALLEKIA---PGYPASWVSLAQLLYDFPELGDVEQMMKYLDNGRAA--DQPRAELLLGKLYYE--GKWVPADA 303 (452)
T ss_dssp CCHHHHHHHHHHHG---GGSTHHHHHHHHHHHHSGGGCCHHHHHHHHHHHHHT--TCHHHHHHHHHHHHH--CSSSCCCH
T ss_pred CCHHHHHHHHHHHc---CCCHHHHHHHHHHHHhCCCCCCHHHHHHHHHHHHHC--CCHHHHHHHHHHHHc--CCCCCCCH
Confidence 46677777777765 6667777777776 3 4566777777777776644 366667777776543 4 67
Q ss_pred HHHHHHHHHHHhcCCCcHHHHHHHHHHHHh
Q psy12719 80 DEAIKLIEKAISIDKSCMFAYETLGTIEVQ 109 (116)
Q Consensus 80 ~~a~~~~~~~~~~~~~~~~~~~~l~~~~~~ 109 (116)
++|+.+|+++. ++++.+++++|.+|..
T Consensus 304 ~~A~~~~~~Aa---~g~~~A~~~Lg~~y~~ 330 (452)
T 3e4b_A 304 KAAEAHFEKAV---GREVAADYYLGQIYRR 330 (452)
T ss_dssp HHHHHHHHTTT---TTCHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHh---CCCHHHHHHHHHHHHC
Confidence 77777777666 6666667777766654
No 196
>3mv2_B Coatomer subunit epsilon; vesicular membrane coat COAT protein complex I, protein TRAN; 2.90A {Saccharomyces cerevisiae} PDB: 3mv3_B
Probab=99.31 E-value=2.8e-11 Score=71.41 Aligned_cols=109 Identities=10% Similarity=0.083 Sum_probs=81.2
Q ss_pred ccchhcHHHHHHHHHHHHhhCC--ChhHHHHHHHHHHHhhcChhhHHHHHHHHhccCCC------CHHHHHHHHHHHHHh
Q psy12719 4 PGDRERVEQSLKEFRNFVDTHS--NVVEACTLFAQVLVDQEDFDGAEEYFNRSIRVDPE------NASLYVHRAMLMLQA 75 (116)
Q Consensus 4 ~~~~~~~~~A~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~A~~~~~~a~~~~~~------~~~~~~~~~~~~~~~ 75 (116)
+...|++++|++.+.+.+..+| ++.++....+.++...|+.+.|.+.++++.+.+|+ .......-+++.+.
T Consensus 110 ~~~~g~~eeAL~~l~~~i~~~~~~~~lea~~l~vqi~L~~~r~d~A~k~l~~~~~~~~d~~~~~d~~l~~Laea~v~l~- 188 (310)
T 3mv2_B 110 QAILGDLDKSLETCVEGIDNDEAEGTTELLLLAIEVALLNNNVSTASTIFDNYTNAIEDTVSGDNEMILNLAESYIKFA- 188 (310)
T ss_dssp HHHHTCHHHHHHHHHHHHTSSCSTTHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHHHHH-
T ss_pred HHHcCCHHHHHHHHHHHhccCCCcCcHHHHHHHHHHHHHCCCHHHHHHHHHHHHhcCccccccchHHHHHHHHHHHHHH-
Confidence 3456889999999999888886 77888888899999999999999999988888883 23333333444554
Q ss_pred cC--CHHHHHHHHHHHHhcCCC--cHHHHHHHHHHHHhhcccccC
Q psy12719 76 RG--NVDEAIKLIEKAISIDKS--CMFAYETLGTIEVQRTFVVLW 116 (116)
Q Consensus 76 ~~--~~~~a~~~~~~~~~~~~~--~~~~~~~l~~~~~~~~~~~~a 116 (116)
.| ++.+|...|+++.+..|+ .+..+.+ ++..+|++++|
T Consensus 189 ~g~~~~q~A~~~f~El~~~~p~~~~~~lLln---~~~~~g~~~eA 230 (310)
T 3mv2_B 189 TNKETATSNFYYYEELSQTFPTWKTQLGLLN---LHLQQRNIAEA 230 (310)
T ss_dssp HTCSTTTHHHHHHHHHHTTSCSHHHHHHHHH---HHHHHTCHHHH
T ss_pred hCCccHHHHHHHHHHHHHhCCCcccHHHHHH---HHHHcCCHHHH
Confidence 45 889999999998888886 3333333 78888887764
No 197
>2xm6_A Protein corresponding to locus C5321 from CFT073 strain; unknown function, SEL1-like repeats; 1.68A {Escherichia coli}
Probab=99.29 E-value=1.1e-10 Score=72.66 Aligned_cols=96 Identities=16% Similarity=0.154 Sum_probs=44.7
Q ss_pred hcHHHHHHHHHHHHhhCCChhHHHHHHHHHHHhhc---ChhhHHHHHHHHhccCCCCHHHHHHHHHHHHHh---cCCHHH
Q psy12719 8 ERVEQSLKEFRNFVDTHSNVVEACTLFAQVLVDQE---DFDGAEEYFNRSIRVDPENASLYVHRAMLMLQA---RGNVDE 81 (116)
Q Consensus 8 ~~~~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~~~---~~~~~~ 81 (116)
+++++|+.+|+++++. +++.++..+|.++...| ++++|+.+|++++.. .++.+++.+|.++... .+++++
T Consensus 310 ~~~~~A~~~~~~a~~~--~~~~a~~~lg~~y~~~g~~~~~~~A~~~~~~a~~~--~~~~a~~~Lg~~y~~g~g~~~~~~~ 385 (490)
T 2xm6_A 310 KNREQAISWYTKSAEQ--GDATAQANLGAIYFRLGSEEEHKKAVEWFRKAAAK--GEKAAQFNLGNALLQGKGVKKDEQQ 385 (490)
T ss_dssp CCHHHHHHHHHHHHHT--TCHHHHHHHHHHHHHSCCHHHHHHHHHHHHHHHHT--TCHHHHHHHHHHHHHTSSSCCCHHH
T ss_pred CCHHHHHHHHHHHHhc--CCHHHHHHHHHHHHhCCCcccHHHHHHHHHHHHHC--CCHHHHHHHHHHHHcCCCCCCCHHH
Confidence 3444444444444443 22334444454444433 444555555555443 3444555555553321 245555
Q ss_pred HHHHHHHHHhcCCCcHHHHHHHHHHHHh
Q psy12719 82 AIKLIEKAISIDKSCMFAYETLGTIEVQ 109 (116)
Q Consensus 82 a~~~~~~~~~~~~~~~~~~~~l~~~~~~ 109 (116)
|+.+++++++. +++.++..+|.++..
T Consensus 386 A~~~~~~A~~~--~~~~a~~~Lg~~y~~ 411 (490)
T 2xm6_A 386 AAIWMRKAAEQ--GLSAAQVQLGEIYYY 411 (490)
T ss_dssp HHHHHHHHHHT--TCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHhC--CCHHHHHHHHHHHHc
Confidence 55555555443 234455555555554
No 198
>1klx_A Cysteine rich protein B; structural genomics, helix-turn-helix, right handed super helix, modular structure', hydrolase; 1.95A {Helicobacter pylori} SCOP: a.118.18.1
Probab=99.29 E-value=3.4e-10 Score=59.57 Aligned_cols=96 Identities=15% Similarity=0.228 Sum_probs=79.8
Q ss_pred cccchhcHHHHHHHHHHHHhhCCChhHHHHHHHHHHHh----hcChhhHHHHHHHHhccCCCCHHHHHHHHHHHHHh---
Q psy12719 3 VPGDRERVEQSLKEFRNFVDTHSNVVEACTLFAQVLVD----QEDFDGAEEYFNRSIRVDPENASLYVHRAMLMLQA--- 75 (116)
Q Consensus 3 ~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~~~--- 75 (116)
++...+..++|+++|+++.+. +++.+.+.+|.+|.. .+++++|+.+|+++.+. .++.+.+++|.+|...
T Consensus 34 ~y~~g~~~~~A~~~~~~Aa~~--g~~~a~~~Lg~~y~~G~g~~~d~~~A~~~~~~Aa~~--g~~~a~~~Lg~~y~~G~g~ 109 (138)
T 1klx_A 34 VSNSQINKQKLFQYLSKACEL--NSGNGCRFLGDFYENGKYVKKDLRKAAQYYSKACGL--NDQDGCLILGYKQYAGKGV 109 (138)
T ss_dssp HTCTTSCHHHHHHHHHHHHHT--TCHHHHHHHHHHHHHCSSSCCCHHHHHHHHHHHHHT--TCHHHHHHHHHHHHHTSSS
T ss_pred HHHcCCCHHHHHHHHHHHHcC--CCHHHHHHHHHHHHcCCCCCccHHHHHHHHHHHHcC--CCHHHHHHHHHHHHCCCCC
Confidence 345556778899999999887 678899999999998 89999999999999987 6789999999997652
Q ss_pred cCCHHHHHHHHHHHHhcCCCcHHHHHHHH
Q psy12719 76 RGNVDEAIKLIEKAISIDKSCMFAYETLG 104 (116)
Q Consensus 76 ~~~~~~a~~~~~~~~~~~~~~~~~~~~l~ 104 (116)
.+++++|+.+++++.+.. ++.+...++
T Consensus 110 ~~d~~~A~~~~~~Aa~~g--~~~A~~~l~ 136 (138)
T 1klx_A 110 VKNEKQAVKTFEKACRLG--SEDACGILN 136 (138)
T ss_dssp CCCHHHHHHHHHHHHHTT--CHHHHHHC-
T ss_pred CcCHHHHHHHHHHHHHCC--CHHHHHHHh
Confidence 589999999999999873 444555554
No 199
>3u64_A Protein TP_0956; tetratrico peptide repeat, protein-prote interaction, syphilis, lipoprotein, transport protein; 2.30A {Treponema pallidum subsp} PDB: 4di3_A 4di4_A*
Probab=99.27 E-value=7.9e-11 Score=68.59 Aligned_cols=91 Identities=11% Similarity=0.101 Sum_probs=81.1
Q ss_pred chhcHHHHHHHHHHHHhhCCC--hhHHHHHHHHHHHhh-----cChhhHHHHHHHHhccCCCC-HHHHHHHHHHHHHhcC
Q psy12719 6 DRERVEQSLKEFRNFVDTHSN--VVEACTLFAQVLVDQ-----EDFDGAEEYFNRSIRVDPEN-ASLYVHRAMLMLQARG 77 (116)
Q Consensus 6 ~~~~~~~A~~~~~~~~~~~~~--~~~~~~~~~~~~~~~-----~~~~~A~~~~~~a~~~~~~~-~~~~~~~~~~~~~~~~ 77 (116)
..+....|...++++++++|+ +..+|..+|.+|... |+.++|..+|++++.++|+. ..+++..|..++...+
T Consensus 175 Al~~l~~A~a~lerAleLDP~~~~GsA~~~LG~lY~~vPp~~gGd~ekA~~~ferAL~LnP~~~id~~v~YA~~l~~~~g 254 (301)
T 3u64_A 175 LPDTVHAAVMMLERACDLWPSYQEGAVWNVLTKFYAAAPESFGGGMEKAHTAFEHLTRYCSAHDPDHHITYADALCIPLN 254 (301)
T ss_dssp CHHHHHHHHHHHHHHHHHCTTHHHHHHHHHHHHHHHHSCTTTTCCHHHHHHHHHHHHHHCCTTCSHHHHHHHHHTTTTTT
T ss_pred HHHhHHHHHHHHHHHHHhCCCcccCHHHHHHHHHHHhCCCccCCCHHHHHHHHHHHHHhCCCCCchHHHHHHHHHHHhcC
Confidence 345678899999999999999 566999999999984 99999999999999999975 9999999998776359
Q ss_pred CHHHHHHHHHHHHhcCCCc
Q psy12719 78 NVDEAIKLIEKAISIDKSC 96 (116)
Q Consensus 78 ~~~~a~~~~~~~~~~~~~~ 96 (116)
+++++.+.+++++...|..
T Consensus 255 d~~~a~~~L~kAL~a~p~~ 273 (301)
T 3u64_A 255 NRAGFDEALDRALAIDPES 273 (301)
T ss_dssp CHHHHHHHHHHHHHCCGGG
T ss_pred CHHHHHHHHHHHHcCCCCC
Confidence 9999999999999988763
No 200
>2xm6_A Protein corresponding to locus C5321 from CFT073 strain; unknown function, SEL1-like repeats; 1.68A {Escherichia coli}
Probab=99.25 E-value=3.3e-10 Score=70.48 Aligned_cols=97 Identities=10% Similarity=0.150 Sum_probs=51.0
Q ss_pred hhcHHHHHHHHHHHHhhCCChhHHHHHHHHHHHh----hcChhhHHHHHHHHhccCCCCHHHHHHHHHHHHHh---cCCH
Q psy12719 7 RERVEQSLKEFRNFVDTHSNVVEACTLFAQVLVD----QEDFDGAEEYFNRSIRVDPENASLYVHRAMLMLQA---RGNV 79 (116)
Q Consensus 7 ~~~~~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~~~---~~~~ 79 (116)
.+++++|+.+|+++.+. +++.+++.+|.+|.. .+++++|+.+|+++... .++.+++.+|.++... .+++
T Consensus 56 ~~~~~~A~~~~~~a~~~--~~~~a~~~Lg~~y~~g~g~~~~~~~A~~~~~~a~~~--~~~~a~~~Lg~~y~~g~g~~~~~ 131 (490)
T 2xm6_A 56 TKDLTQAMDWFRRAAEQ--GYTPAEYVLGLRYMNGEGVPQDYAQAVIWYKKAALK--GLPQAQQNLGVMYHEGNGVKVDK 131 (490)
T ss_dssp CCCHHHHHHHHHHHHHT--TCHHHHHHHHHHHHHTSSSCCCHHHHHHHHHHHHHT--TCHHHHHHHHHHHHHTSSSCCCH
T ss_pred CcCHHHHHHHHHHHHHC--CCHHHHHHHHHHHHcCCCCCCCHHHHHHHHHHHHHC--CCHHHHHHHHHHHHcCCCCCCCH
Confidence 34555666666665544 345555555655555 55556666666555543 3445555555554331 2455
Q ss_pred HHHHHHHHHHHhcCCCcHHHHHHHHHHHHh
Q psy12719 80 DEAIKLIEKAISIDKSCMFAYETLGTIEVQ 109 (116)
Q Consensus 80 ~~a~~~~~~~~~~~~~~~~~~~~l~~~~~~ 109 (116)
++|+.+++++.+. +++.++..+|.++..
T Consensus 132 ~~A~~~~~~a~~~--~~~~a~~~Lg~~y~~ 159 (490)
T 2xm6_A 132 AESVKWFRLAAEQ--GRDSGQQSMGDAYFE 159 (490)
T ss_dssp HHHHHHHHHHHHT--TCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHC--CCHHHHHHHHHHHHc
Confidence 5555555555443 344455555555543
No 201
>3ly7_A Transcriptional activator CADC; alpha/beta domain, alpha domain, DNA-binding, transcription regulation, transmembrane; 1.80A {Escherichia coli} PDB: 3lya_A 3ly8_A 3ly9_A
Probab=99.24 E-value=3.4e-10 Score=68.10 Aligned_cols=109 Identities=16% Similarity=0.173 Sum_probs=70.4
Q ss_pred chhcHHHHHHHHHHHHhhCCChhHHHHHHHHHHHhhcCh--------hhHHHHHH--HHhccCCCCHHHHHHHHHHHHHh
Q psy12719 6 DRERVEQSLKEFRNFVDTHSNVVEACTLFAQVLVDQEDF--------DGAEEYFN--RSIRVDPENASLYVHRAMLMLQA 75 (116)
Q Consensus 6 ~~~~~~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~A~~~~~--~a~~~~~~~~~~~~~~~~~~~~~ 75 (116)
...++.+|+.+|+++++.+|+.+.++-.++.++.....+ ......++ .++..+|.++.++..++..++.
T Consensus 211 ~~~~~~~A~~l~e~Al~lDP~~a~A~A~la~a~~~~~~~~~~~~~~~~~l~~a~~a~~a~~~~~~~a~~~~alal~~l~- 289 (372)
T 3ly7_A 211 DDKSLNRASELLGEIVQSSPEFTYARAEKALVDIVRHSQHPLDEKQLAALNTEIDNIVTLPELNNLSIIYQIKAVSALV- 289 (372)
T ss_dssp SHHHHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHHHHSCCCHHHHHHHHHHHHHHHTCGGGTTCHHHHHHHHHHHHH-
T ss_pred CHHHHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHhccCCCchhhHHHHHHHHHHHHhcccCCcCHHHHHHHHHHHHh-
Confidence 345678999999999999999988777766666421111 00011111 1234556777777777766555
Q ss_pred cCCHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHhhcccccC
Q psy12719 76 RGNVDEAIKLIEKAISIDKSCMFAYETLGTIEVQRTFVVLW 116 (116)
Q Consensus 76 ~~~~~~a~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~a 116 (116)
.|++++|+..+++++.++|+ ...+..+|.++...|++++|
T Consensus 290 ~gd~d~A~~~l~rAl~Ln~s-~~a~~llG~~~~~~G~~~eA 329 (372)
T 3ly7_A 290 KGKTDESYQAINTGIDLEMS-WLNYVLLGKVYEMKGMNREA 329 (372)
T ss_dssp HTCHHHHHHHHHHHHHHCCC-HHHHHHHHHHHHHTTCHHHH
T ss_pred CCCHHHHHHHHHHHHhcCCC-HHHHHHHHHHHHHCCCHHHH
Confidence 57777777777777777764 44566777777777776653
No 202
>1nzn_A CGI-135 protein, fission protein FIS1P; TPR, unknown function; 2.00A {Homo sapiens} SCOP: a.118.8.1 PDB: 1iyg_A
Probab=99.20 E-value=1.9e-09 Score=55.52 Aligned_cols=100 Identities=15% Similarity=0.043 Sum_probs=83.7
Q ss_pred hcHHHHHHHHHHHHhhCCChhHHHHHHHHHHHhhcChhh---HHHHHHHHhccC-C-CCHHHHHHHHHHHHHhcCCHHHH
Q psy12719 8 ERVEQSLKEFRNFVDTHSNVVEACTLFAQVLVDQEDFDG---AEEYFNRSIRVD-P-ENASLYVHRAMLMLQARGNVDEA 82 (116)
Q Consensus 8 ~~~~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---A~~~~~~a~~~~-~-~~~~~~~~~~~~~~~~~~~~~~a 82 (116)
.......+.|.+....++.+.++.+.+|.++.+.....+ ++..++..++.+ | .....+|.+|..+++ .|+|++|
T Consensus 15 ~~l~~~~~~y~~e~~~~~~s~~~~F~yAw~Lv~S~~~~d~~~GI~lLe~l~~~~~p~~~Rd~lY~LAvg~yk-lg~Y~~A 93 (126)
T 1nzn_A 15 EDLLKFEKKFQSEKAAGSVSKSTQFEYAWCLVRTRYNDDIRKGIVLLEELLPKGSKEEQRDYVFYLAVGNYR-LKEYEKA 93 (126)
T ss_dssp HHHHHHHHHHHHHHHHSCCCHHHHHHHHHHHTTSSSHHHHHHHHHHHHHHTTTSCHHHHHHHHHHHHHHHHH-TTCHHHH
T ss_pred HHHHHHHHHHHHHhccCCCcHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHhcCCcchHHHHHHHHHHHHHH-hhhHHHH
Confidence 345667778888888888889999999999998776665 999999999887 5 567789999999998 9999999
Q ss_pred HHHHHHHHhcCCCcHHHHHHHHHHHH
Q psy12719 83 IKLIEKAISIDKSCMFAYETLGTIEV 108 (116)
Q Consensus 83 ~~~~~~~~~~~~~~~~~~~~l~~~~~ 108 (116)
.++++.+++..|++..+......+..
T Consensus 94 ~~~~~~lL~~eP~n~QA~~Lk~~i~~ 119 (126)
T 1nzn_A 94 LKYVRGLLQTEPQNNQAKELERLIDK 119 (126)
T ss_dssp HHHHHHHHHHCTTCHHHHHHHHHHHH
T ss_pred HHHHHHHHHhCCCCHHHHHHHHHHHH
Confidence 99999999999999877666555543
No 203
>3mv2_B Coatomer subunit epsilon; vesicular membrane coat COAT protein complex I, protein TRAN; 2.90A {Saccharomyces cerevisiae} PDB: 3mv3_B
Probab=99.16 E-value=1e-09 Score=64.84 Aligned_cols=106 Identities=14% Similarity=0.065 Sum_probs=82.6
Q ss_pred cccchhcHHHHHHHHHHHHhhCCC------hhHHHHHHHHHHHhhc--ChhhHHHHHHHHhccCCC--CHHHHHHHHHHH
Q psy12719 3 VPGDRERVEQSLKEFRNFVDTHSN------VVEACTLFAQVLVDQE--DFDGAEEYFNRSIRVDPE--NASLYVHRAMLM 72 (116)
Q Consensus 3 ~~~~~~~~~~A~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~--~~~~A~~~~~~a~~~~~~--~~~~~~~~~~~~ 72 (116)
++..+|+.+.|.+.++++.+.+|+ ...+...-+.+....| ++++|...|+++....|+ +...+++ ++
T Consensus 145 i~L~~~r~d~A~k~l~~~~~~~~d~~~~~d~~l~~Laea~v~l~~g~~~~q~A~~~f~El~~~~p~~~~~~lLln---~~ 221 (310)
T 3mv2_B 145 VALLNNNVSTASTIFDNYTNAIEDTVSGDNEMILNLAESYIKFATNKETATSNFYYYEELSQTFPTWKTQLGLLN---LH 221 (310)
T ss_dssp HHHHTTCHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHHHHHHTCSTTTHHHHHHHHHHTTSCSHHHHHHHHH---HH
T ss_pred HHHHCCCHHHHHHHHHHHHhcCccccccchHHHHHHHHHHHHHHhCCccHHHHHHHHHHHHHhCCCcccHHHHHH---HH
Confidence 356789999999999999999983 2333333354455556 999999999999988887 3344444 66
Q ss_pred HHhcCCHHHHHHHHHHHHhc----------CCCcHHHHHHHHHHHHhhcc
Q psy12719 73 LQARGNVDEAIKLIEKAISI----------DKSCMFAYETLGTIEVQRTF 112 (116)
Q Consensus 73 ~~~~~~~~~a~~~~~~~~~~----------~~~~~~~~~~l~~~~~~~~~ 112 (116)
.. +|++++|.+.++.+++. +|+++.++.++..+....|+
T Consensus 222 ~~-~g~~~eAe~~L~~l~~~~p~~~~k~~~~p~~~~~LaN~i~l~~~lgk 270 (310)
T 3mv2_B 222 LQ-QRNIAEAQGIVELLLSDYYSVEQKENAVLYKPTFLANQITLALMQGL 270 (310)
T ss_dssp HH-HTCHHHHHHHHHHHHSHHHHTTTCHHHHSSHHHHHHHHHHHHHHTTC
T ss_pred HH-cCCHHHHHHHHHHHHHhcccccccccCCCCCHHHHHHHHHHHHHhCh
Confidence 67 89999999999987776 48899999999888887775
No 204
>4b4t_Q 26S proteasome regulatory subunit RPN6; hydrolase, AAA-atpases, protein degradation, ubiquitin-prote pathway; 7.40A {Saccharomyces cerevisiae}
Probab=99.14 E-value=3e-10 Score=69.29 Aligned_cols=55 Identities=13% Similarity=0.143 Sum_probs=44.3
Q ss_pred cchhcHHHHHHHHHHHHhhCCChh-----------------HHHHHHHHHHHhhcChhhHHHHHHHHhccCC
Q psy12719 5 GDRERVEQSLKEFRNFVDTHSNVV-----------------EACTLFAQVLVDQEDFDGAEEYFNRSIRVDP 59 (116)
Q Consensus 5 ~~~~~~~~A~~~~~~~~~~~~~~~-----------------~~~~~~~~~~~~~~~~~~A~~~~~~a~~~~~ 59 (116)
.+.|+|++|++.|.++++..|... .++..+|.+|...|++++|.+.+.+++...+
T Consensus 15 ~~~~~y~eA~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~al~~l~~~y~~~~~~~~a~~~~~~~~~~~~ 86 (434)
T 4b4t_Q 15 VNEKQYNEAEQVYLSLLDKDSSQSSAAAGASVDDKRRNEQETSILELGQLYVTMGAKDKLREFIPHSTEYMM 86 (434)
T ss_dssp HHHTCHHHHHHHHHHHHHSCCCSSSBSSSSSBCSHHHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHTHHHHH
T ss_pred HHCCCHHHHHHHHHHHHhhCcccchhHHHHHHHHHHhhhHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHH
Confidence 356889999999999998887643 2577899999999999999999888776543
No 205
>2v5f_A Prolyl 4-hydroxylase subunit alpha-1; endoplasmic reticulum, metal-binding, oxidoreductase; 2.03A {Homo sapiens} PDB: 1tjc_A
Probab=99.13 E-value=5.7e-10 Score=55.98 Aligned_cols=67 Identities=12% Similarity=0.065 Sum_probs=59.7
Q ss_pred ccchhcHHHHHHHHHHHHhhC-------CChhHHHHHHHHHHHhhcChhhHHHHHHHHhccCCCCHHHHHHHHH
Q psy12719 4 PGDRERVEQSLKEFRNFVDTH-------SNVVEACTLFAQVLVDQEDFDGAEEYFNRSIRVDPENASLYVHRAM 70 (116)
Q Consensus 4 ~~~~~~~~~A~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~~~~ 70 (116)
+...++|..|+.+|++++... +...+++..+|.++.+.|+++.|+..++++++.+|++..+..+++.
T Consensus 15 ~~~~~~y~~A~~W~~~Al~~~~~~~~~~~~~~~i~~~L~~~~~~~g~~~~A~~~~~~al~l~P~~~~~~~n~~~ 88 (104)
T 2v5f_A 15 AYTEADYYHTELWMEQALRQLDEGEISTIDKVSVLDYLSYAVYQQGDLDKALLLTKKLLELDPEHQRANGNLKY 88 (104)
T ss_dssp HHHTTCHHHHHHHHHHHHHHHHTTCCCSSCHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHH
T ss_pred HHHccchHHHHHHHHHHHHhhhccCCCcccHHHHHHHHHHHHHHccCHHHHHHHHHHHHhcCCCCHHHHhhHHH
Confidence 456789999999999999864 3457899999999999999999999999999999999999888873
No 206
>3bee_A Putative YFRE protein; putaive YFRE protein, structural GE PSI-2, protein structure initiative; 2.15A {Vibrio parahaemolyticus rimd 2210633}
Probab=99.03 E-value=1.9e-09 Score=53.03 Aligned_cols=53 Identities=11% Similarity=0.013 Sum_probs=50.7
Q ss_pred HHHHHHHHHHHHhhCCChhHHHHHHHHHHHhhcChhhHHHHHHHHhccCCCCH
Q psy12719 10 VEQSLKEFRNFVDTHSNVVEACTLFAQVLVDQEDFDGAEEYFNRSIRVDPENA 62 (116)
Q Consensus 10 ~~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~a~~~~~~~~ 62 (116)
.++|...++++++.+|+++.+++.+|..++..|+|++|+..+++++..+|.++
T Consensus 25 ~~~A~~~l~~AL~~dp~~~rA~~~lg~~~~~~g~y~~Ai~~w~~~l~~~p~~~ 77 (93)
T 3bee_A 25 TDEVSLLLEQALQLEPYNEAALSLIANDHFISFRFQEAIDTWVLLLDSNDPNL 77 (93)
T ss_dssp CHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHTCCCTTC
T ss_pred CHHHHHHHHHHHHHCcCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCCc
Confidence 68999999999999999999999999999999999999999999999999843
No 207
>4e6h_A MRNA 3'-END-processing protein RNA14; HAT domain, heat repeat, CLP1, PCF11, structural protein; 2.30A {Kluyveromyces lactis} PDB: 4e85_A 4eba_A
Probab=99.01 E-value=1.2e-08 Score=66.17 Aligned_cols=105 Identities=10% Similarity=-0.035 Sum_probs=90.2
Q ss_pred HHHHHHHHHHHHhhCCChhHHHHHHHHHHHhhcChhhHH-HHHHHHhccCCCCHHHHHHHHHHHHHhcCCHHHHHHHHHH
Q psy12719 10 VEQSLKEFRNFVDTHSNVVEACTLFAQVLVDQEDFDGAE-EYFNRSIRVDPENASLYVHRAMLMLQARGNVDEAIKLIEK 88 (116)
Q Consensus 10 ~~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~A~-~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~ 88 (116)
.......|++++..+|..+++|+.++......|+.++|. ..|.+++...|.+...|...+..... .|++++|.+.|++
T Consensus 325 ~~Rv~~~Ye~aL~~~p~~~~lW~~ya~~~~~~~~~~~a~r~il~rAi~~~P~s~~Lwl~~a~~ee~-~~~~e~aR~iyek 403 (679)
T 4e6h_A 325 KARMTYVYMQAAQHVCFAPEIWFNMANYQGEKNTDSTVITKYLKLGQQCIPNSAVLAFSLSEQYEL-NTKIPEIETTILS 403 (679)
T ss_dssp HHHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHSCCTTHHHHHHHHHHHHCTTCHHHHHHHHHHHHH-TTCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHcCCCHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHH-hCCHHHHHHHHHH
Confidence 345667899999999999999999999999999999997 99999999999999999999998776 8999999999999
Q ss_pred HHhcC-----------CC-----------cHHHHHHHHHHHHhhccccc
Q psy12719 89 AISID-----------KS-----------CMFAYETLGTIEVQRTFVVL 115 (116)
Q Consensus 89 ~~~~~-----------~~-----------~~~~~~~l~~~~~~~~~~~~ 115 (116)
++... |. ...+|...+.+....|+.+.
T Consensus 404 ~l~~l~~~~~~~~~~~p~~~~~~~~~~~~~~~vWi~y~~~erR~~~l~~ 452 (679)
T 4e6h_A 404 CIDRIHLDLAALMEDDPTNESAINQLKSKLTYVYCVYMNTMKRIQGLAA 452 (679)
T ss_dssp HHHHHHHHHHHHHHHSTTCHHHHHHHHHHHHHHHHHHHHHHHHHHCHHH
T ss_pred HHHHHHHHhhhhhhccCcchhhhhhhccchHHHHHHHHHHHHHcCCHHH
Confidence 99752 42 34578888888777776543
No 208
>1b89_A Protein (clathrin heavy chain); triskelion, coated vesicles, endocytosis, SELF- assembly, alpha-alpha superhelix; 2.60A {Bos taurus} SCOP: a.118.1.3
Probab=99.00 E-value=5e-10 Score=68.94 Aligned_cols=74 Identities=16% Similarity=0.132 Sum_probs=48.8
Q ss_pred HHHHHHHHHHHhhcChhhHHHHHHHHhccCCCCHHHHHHHHHHHHHhcCCHHHHHHHHHHHHhcCCCcHHHHHHHHHHHH
Q psy12719 29 EACTLFAQVLVDQEDFDGAEEYFNRSIRVDPENASLYVHRAMLMLQARGNVDEAIKLIEKAISIDKSCMFAYETLGTIEV 108 (116)
Q Consensus 29 ~~~~~~~~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~l~~~~~ 108 (116)
.+|..+|..++..|+|++|..+|.++ ..|..++.++.+ +|++++|++.++++ +++.+|.....++.
T Consensus 123 ~a~~~IGd~~~~~g~yeeA~~~Y~~a--------~n~~~LA~~L~~-Lg~yq~AVea~~KA-----~~~~~Wk~v~~aCv 188 (449)
T 1b89_A 123 AHIQQVGDRCYDEKMYDAAKLLYNNV--------SNFGRLASTLVH-LGEYQAAVDGARKA-----NSTRTWKEVCFACV 188 (449)
T ss_dssp --------------CTTTHHHHHHHT--------TCHHHHHHHHHT-TTCHHHHHHHHHHH-----TCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHh--------hhHHHHHHHHHH-hccHHHHHHHHHHc-----CCchhHHHHHHHHH
Confidence 47888899999999999999999876 367889999877 89999999999988 46778888888888
Q ss_pred hhcccccC
Q psy12719 109 QRTFVVLW 116 (116)
Q Consensus 109 ~~~~~~~a 116 (116)
..|+++.|
T Consensus 189 ~~~ef~lA 196 (449)
T 1b89_A 189 DGKEFRLA 196 (449)
T ss_dssp HTTCHHHH
T ss_pred HcCcHHHH
Confidence 77776643
No 209
>4b4t_Q 26S proteasome regulatory subunit RPN6; hydrolase, AAA-atpases, protein degradation, ubiquitin-prote pathway; 7.40A {Saccharomyces cerevisiae}
Probab=99.00 E-value=2.8e-09 Score=65.01 Aligned_cols=111 Identities=7% Similarity=0.016 Sum_probs=83.9
Q ss_pred ccchhcHHHHHHHHHHHHhhCC------ChhHHHHHHHHHHHhhcChhhHHHHHHHHhccC------CCCHHHHHHHHHH
Q psy12719 4 PGDRERVEQSLKEFRNFVDTHS------NVVEACTLFAQVLVDQEDFDGAEEYFNRSIRVD------PENASLYVHRAML 71 (116)
Q Consensus 4 ~~~~~~~~~A~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~A~~~~~~a~~~~------~~~~~~~~~~~~~ 71 (116)
+...|++++|+..+.+++...+ ....++..+|.++...|++++|...+.+++... |....++..++.+
T Consensus 105 ~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 184 (434)
T 4b4t_Q 105 EQVPDSLDDQIFVCEKSIEFAKREKRVFLKHSLSIKLATLHYQKKQYKDSLALINDLLREFKKLDDKPSLVDVHLLESKV 184 (434)
T ss_dssp CSCCSCHHHHHHHHHHHHHHHHHSSCCSSHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHTTSSCSTHHHHHHHHHHHH
T ss_pred HhCCCCHHHHHHHHHHHHHHHHHhCccHHHHHHHHHHHHHHHHccChHHHHHHHHHHHHHHHhcccchhHHHHHHHHHHH
Confidence 3456788888888888876542 335688899999999999999999999887642 3336688999999
Q ss_pred HHHhcCCHHHHHHHHHHHHhcCCCc-------HHHHHHHHHHHHhhccccc
Q psy12719 72 MLQARGNVDEAIKLIEKAISIDKSC-------MFAYETLGTIEVQRTFVVL 115 (116)
Q Consensus 72 ~~~~~~~~~~a~~~~~~~~~~~~~~-------~~~~~~l~~~~~~~~~~~~ 115 (116)
+.. .|++++|...+++++...+.. ...+..+|.++...+++++
T Consensus 185 ~~~-~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~g~~~~~~~~y~~ 234 (434)
T 4b4t_Q 185 YHK-LRNLAKSKASLTAARTAANSIYCPTQTVAELDLMSGILHCEDKDYKT 234 (434)
T ss_dssp HHH-TTCHHHHHHHHHHHHHHHHHSCCCHHHHHHHHHHHHHHTTSSSCHHH
T ss_pred HHH-hCcHHHHHHHHHHHHHHhhcCCCchHHHHHHHHHHHHHHHHHHhHHH
Confidence 887 899999999999998764321 3455667777766666654
No 210
>3n71_A Histone lysine methyltransferase SMYD1; heart development, transcription; HET: SFG MES; 2.30A {Mus musculus}
Probab=98.99 E-value=1.9e-09 Score=67.51 Aligned_cols=82 Identities=7% Similarity=-0.006 Sum_probs=67.9
Q ss_pred HHHHHHhhcChhhHHHHHHHHhcc-----CCCC---HHHHHHHHHHHHHhcCCHHHHHHHHHHHHhc--------CCCcH
Q psy12719 34 FAQVLVDQEDFDGAEEYFNRSIRV-----DPEN---ASLYVHRAMLMLQARGNVDEAIKLIEKAISI--------DKSCM 97 (116)
Q Consensus 34 ~~~~~~~~~~~~~A~~~~~~a~~~-----~~~~---~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~--------~~~~~ 97 (116)
.+..+..+|++++|+..+++++.+ .|++ ...+.++|.+|.. +|++++|+..+++++.. +|+..
T Consensus 315 ~a~~~~~qg~~~eA~~l~~~aL~~~~~~lg~~Hp~~a~~~~nLa~~y~~-~g~~~eA~~~~~~aL~i~~~~lG~~Hp~~a 393 (490)
T 3n71_A 315 KIDKARSEGLYHEVVKLCRECLEKQEPVFADTNLYVLRLLSIASEVLSY-LQAYEEASHYARRMVDGYMKLYHHNNAQLG 393 (490)
T ss_dssp HHHHHHTTTCHHHHHHHHHHHHHHHTTTBCTTSHHHHHHHHHHHHHHHH-TTCHHHHHHHHHHHHHHHHHHSCTTCHHHH
T ss_pred HHHHHHhCCCHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHH-hcCHHHHHHHHHHHHHHHHHHcCCCCHHHH
Confidence 344566899999999999999865 3444 5578999999877 89999999999999975 44556
Q ss_pred HHHHHHHHHHHhhcccccC
Q psy12719 98 FAYETLGTIEVQRTFVVLW 116 (116)
Q Consensus 98 ~~~~~l~~~~~~~~~~~~a 116 (116)
..+.+||.+|..+|++++|
T Consensus 394 ~~l~nLa~~~~~~G~~~eA 412 (490)
T 3n71_A 394 MAVMRAGLTNWHAGHIEVG 412 (490)
T ss_dssp HHHHHHHHHHHHTTCHHHH
T ss_pred HHHHHHHHHHHHCCCHHHH
Confidence 7799999999999999875
No 211
>3ly7_A Transcriptional activator CADC; alpha/beta domain, alpha domain, DNA-binding, transcription regulation, transmembrane; 1.80A {Escherichia coli} PDB: 3lya_A 3ly8_A 3ly9_A
Probab=98.98 E-value=2.1e-08 Score=60.48 Aligned_cols=76 Identities=14% Similarity=0.063 Sum_probs=68.3
Q ss_pred HhhCCChhHHHHHHHHHHHhhcChhhHHHHHHHHhccCCCCHHHHHHHHHHHHHhcCCHHHHHHHHHHHHhcCCCcHH
Q psy12719 21 VDTHSNVVEACTLFAQVLVDQEDFDGAEEYFNRSIRVDPENASLYVHRAMLMLQARGNVDEAIKLIEKAISIDKSCMF 98 (116)
Q Consensus 21 ~~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~ 98 (116)
+..+|.++.++..++..+...|++++|+..+++++.++| +..++..+|.++.. .|++++|++.+.+++.++|..+.
T Consensus 270 ~~~~~~~a~~~~alal~~l~~gd~d~A~~~l~rAl~Ln~-s~~a~~llG~~~~~-~G~~~eA~e~~~~AlrL~P~~~t 345 (372)
T 3ly7_A 270 LPELNNLSIIYQIKAVSALVKGKTDESYQAINTGIDLEM-SWLNYVLLGKVYEM-KGMNREAADAYLTAFNLRPGANT 345 (372)
T ss_dssp CGGGTTCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCC-CHHHHHHHHHHHHH-TTCHHHHHHHHHHHHHHSCSHHH
T ss_pred cccCCcCHHHHHHHHHHHHhCCCHHHHHHHHHHHHhcCC-CHHHHHHHHHHHHH-CCCHHHHHHHHHHHHhcCCCcCh
Confidence 356688899999999999889999999999999999996 47788899999777 89999999999999999998864
No 212
>1xi4_A Clathrin heavy chain; alpha-ZIG-ZAG, beta-propeller, endocytosis-exocyto complex; 7.90A {Bos taurus} SCOP: i.23.1.1 PDB: 1xi5_A 3iyv_A
Probab=98.97 E-value=9.2e-09 Score=70.84 Aligned_cols=77 Identities=13% Similarity=0.183 Sum_probs=61.4
Q ss_pred hcHHHHHHHHHHHHhhCCChhHHHHHHHHHHHhhcChhhHHHHHHHHhccCCCCHHHHHHHHHHHHHhcCCHHHHHHHHH
Q psy12719 8 ERVEQSLKEFRNFVDTHSNVVEACTLFAQVLVDQEDFDGAEEYFNRSIRVDPENASLYVHRAMLMLQARGNVDEAIKLIE 87 (116)
Q Consensus 8 ~~~~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~ 87 (116)
+++++|.+.+++. +.+.+|..+|.++...|++++|+..|.++ +++..+..++.++.+ .|+++++++.+.
T Consensus 1090 ~nldrAiE~Aerv-----n~p~vWsqLAKAql~~G~~kEAIdsYiKA-----dD~say~eVa~~~~~-lGkyEEAIeyL~ 1158 (1630)
T 1xi4_A 1090 GNLDRAYEFAERC-----NEPAVWSQLAKAQLQKGMVKEAIDSYIKA-----DDPSSYMEVVQAANT-SGNWEELVKYLQ 1158 (1630)
T ss_pred hhHHHHHHHHHhc-----CCHHHHHHHHHHHHhCCCHHHHHHHHHhc-----CChHHHHHHHHHHHH-cCCHHHHHHHHH
Confidence 4444444444433 55789999999999999999999999775 788899999999776 899999999999
Q ss_pred HHHhcCCC
Q psy12719 88 KAISIDKS 95 (116)
Q Consensus 88 ~~~~~~~~ 95 (116)
.+.+..+.
T Consensus 1159 mArk~~~e 1166 (1630)
T 1xi4_A 1159 MARKKARE 1166 (1630)
T ss_pred HHHhhccc
Confidence 88876643
No 213
>3u64_A Protein TP_0956; tetratrico peptide repeat, protein-prote interaction, syphilis, lipoprotein, transport protein; 2.30A {Treponema pallidum subsp} PDB: 4di3_A 4di4_A*
Probab=98.95 E-value=7.5e-09 Score=60.44 Aligned_cols=90 Identities=10% Similarity=-0.038 Sum_probs=72.0
Q ss_pred CChhHHHHHHHHHHHh-----hc------ChhhHHHHHHHHhccCCC--CHHHHHHHHHHHHHhc-----CCHHHHHHHH
Q psy12719 25 SNVVEACTLFAQVLVD-----QE------DFDGAEEYFNRSIRVDPE--NASLYVHRAMLMLQAR-----GNVDEAIKLI 86 (116)
Q Consensus 25 ~~~~~~~~~~~~~~~~-----~~------~~~~A~~~~~~a~~~~~~--~~~~~~~~~~~~~~~~-----~~~~~a~~~~ 86 (116)
|+++++++..|..... .+ ....|...++++++++|+ +..+|..+|..|.. . |+.++|.+.|
T Consensus 149 ~~dve~L~W~ai~~ss~a~~~~gg~~Al~~l~~A~a~lerAleLDP~~~~GsA~~~LG~lY~~-vPp~~gGd~ekA~~~f 227 (301)
T 3u64_A 149 RVDVGTLYWVGTGYVAAFALTPLGSALPDTVHAAVMMLERACDLWPSYQEGAVWNVLTKFYAA-APESFGGGMEKAHTAF 227 (301)
T ss_dssp GGGHHHHHHHHHHHHHHHTTSCTTSCCHHHHHHHHHHHHHHHHHCTTHHHHHHHHHHHHHHHH-SCTTTTCCHHHHHHHH
T ss_pred ccccHHHHHHHHHHHHHHhcCCCChHHHHhHHHHHHHHHHHHHhCCCcccCHHHHHHHHHHHh-CCCccCCCHHHHHHHH
Confidence 5556666666655432 13 356889999999999999 67799999999776 4 9999999999
Q ss_pred HHHHhcCCCc-HHHHHHHHHHHHhh-ccccc
Q psy12719 87 EKAISIDKSC-MFAYETLGTIEVQR-TFVVL 115 (116)
Q Consensus 87 ~~~~~~~~~~-~~~~~~l~~~~~~~-~~~~~ 115 (116)
+++++++|+. ..+++..|..+... |+.++
T Consensus 228 erAL~LnP~~~id~~v~YA~~l~~~~gd~~~ 258 (301)
T 3u64_A 228 EHLTRYCSAHDPDHHITYADALCIPLNNRAG 258 (301)
T ss_dssp HHHHHHCCTTCSHHHHHHHHHTTTTTTCHHH
T ss_pred HHHHHhCCCCCchHHHHHHHHHHHhcCCHHH
Confidence 9999999975 99999999988774 76654
No 214
>1pc2_A Mitochondria fission protein; unknown function; NMR {Homo sapiens} SCOP: a.118.8.1
Probab=98.92 E-value=7.5e-09 Score=55.06 Aligned_cols=65 Identities=8% Similarity=0.185 Sum_probs=58.2
Q ss_pred hhcHHHHHHHHHHHHhhC-C-ChhHHHHHHHHHHHhhcChhhHHHHHHHHhccCCCCHHHHHHHHHH
Q psy12719 7 RERVEQSLKEFRNFVDTH-S-NVVEACTLFAQVLVDQEDFDGAEEYFNRSIRVDPENASLYVHRAML 71 (116)
Q Consensus 7 ~~~~~~A~~~~~~~~~~~-~-~~~~~~~~~~~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~~~~~ 71 (116)
..+.++++..++..++.+ | ...++++.+|..+++.++|++|+.+++++++++|++..+......+
T Consensus 48 ~~~~~~gI~lLe~ll~~~~p~~~rd~lY~LAv~~~kl~~Y~~A~~y~~~lL~ieP~n~QA~~Lk~~i 114 (152)
T 1pc2_A 48 NDDIRKGIVLLEELLPKGSKEEQRDYVFYLAVGNYRLKEYEKALKYVRGLLQTEPQNNQAKELERLI 114 (152)
T ss_dssp HHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHTSCHHHHHHHHHHHHHHCTTCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhcCCccchHHHHHHHHHHHHHccCHHHHHHHHHHHHhcCCCCHHHHHHHHHH
Confidence 457889999999999998 7 5688999999999999999999999999999999998887665544
No 215
>3qww_A SET and MYND domain-containing protein 2; methyltransferase, HSP90, transferase-transferase inhibitor; HET: SFG; 1.80A {Mus musculus} PDB: 3qwv_A* 3s7d_A* 3s7b_A* 3s7f_A* 3s7j_A* 3tg4_A* 3tg5_A* 3rib_A*
Probab=98.90 E-value=2.4e-09 Score=66.06 Aligned_cols=77 Identities=13% Similarity=0.002 Sum_probs=64.5
Q ss_pred HhhcChhhHHHHHHHHhcc-----CCCC---HHHHHHHHHHHHHhcCCHHHHHHHHHHHHhc--------CCCcHHHHHH
Q psy12719 39 VDQEDFDGAEEYFNRSIRV-----DPEN---ASLYVHRAMLMLQARGNVDEAIKLIEKAISI--------DKSCMFAYET 102 (116)
Q Consensus 39 ~~~~~~~~A~~~~~~a~~~-----~~~~---~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~--------~~~~~~~~~~ 102 (116)
...|+|++|+..+++++.+ .|++ ...+.++|.+|.. +|++++|+.++++++.. +|+....+.+
T Consensus 309 ~~~g~~~eA~~~~~~~L~i~~~~lg~~Hp~~a~~~~nLa~~y~~-~g~~~eA~~~~~~aL~i~~~~lG~~Hp~~a~~l~n 387 (433)
T 3qww_A 309 KHYKSPSELLEICELSQEKMSSVFEDSNVYMLHMMYQAMGVCLY-MQDWEGALKYGQKIIKPYSKHYPVYSLNVASMWLK 387 (433)
T ss_dssp TTTSCHHHHHHHHHHHHHHHTTTBCTTSHHHHHHHHHHHHHHHH-TTCHHHHHHHHHHHHHHHHHHSCSSCHHHHHHHHH
T ss_pred hhccCHHHHHHHHHHHHHHhhCccChhchHHHHHHHHHHHHHHh-hcCHHHHHHHHHHHHHHHHHHcCCCChHHHHHHHH
Confidence 3568899999999999874 4555 4568899999877 99999999999999975 4455677999
Q ss_pred HHHHHHhhcccccC
Q psy12719 103 LGTIEVQRTFVVLW 116 (116)
Q Consensus 103 l~~~~~~~~~~~~a 116 (116)
+|.+|..+|++++|
T Consensus 388 La~~~~~qg~~~eA 401 (433)
T 3qww_A 388 LGRLYMGLENKAAG 401 (433)
T ss_dssp HHHHHHHTTCHHHH
T ss_pred HHHHHHhccCHHHH
Confidence 99999999999875
No 216
>1xi4_A Clathrin heavy chain; alpha-ZIG-ZAG, beta-propeller, endocytosis-exocyto complex; 7.90A {Bos taurus} SCOP: i.23.1.1 PDB: 1xi5_A 3iyv_A
Probab=98.90 E-value=2.3e-08 Score=68.93 Aligned_cols=98 Identities=9% Similarity=0.045 Sum_probs=66.6
Q ss_pred ccchhcHHHHHHHHHHHHhhCCChhHHHHHHHHHHHhhcChhhHHHHHHHHhccCCCC----------------------
Q psy12719 4 PGDRERVEQSLKEFRNFVDTHSNVVEACTLFAQVLVDQEDFDGAEEYFNRSIRVDPEN---------------------- 61 (116)
Q Consensus 4 ~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~a~~~~~~~---------------------- 61 (116)
+...|++++|++.|.++ +++..+...|.++.+.|++++|++++..+.+..+..
T Consensus 1115 ql~~G~~kEAIdsYiKA-----dD~say~eVa~~~~~lGkyEEAIeyL~mArk~~~e~~Idt~LafaYAKl~rleele~f 1189 (1630)
T 1xi4_A 1115 QLQKGMVKEAIDSYIKA-----DDPSSYMEVVQAANTSGNWEELVKYLQMARKKARESYVETELIFALAKTNRLAELEEF 1189 (1630)
T ss_pred HHhCCCHHHHHHHHHhc-----CChHHHHHHHHHHHHcCCHHHHHHHHHHHHhhcccccccHHHHHHHHhhcCHHHHHHH
Confidence 45678888999888775 667788888999999999999999988877655332
Q ss_pred -----HHHHHHHHHHHHHhcCCHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHhhccccc
Q psy12719 62 -----ASLYVHRAMLMLQARGNVDEAIKLIEKAISIDKSCMFAYETLGTIEVQRTFVVL 115 (116)
Q Consensus 62 -----~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~ 115 (116)
...+..+|..++. .|++++|...|.++ .-|..++.++..+|++++
T Consensus 1190 I~~~n~ad~~~iGd~le~-eg~YeeA~~~Y~kA--------~ny~rLA~tLvkLge~q~ 1239 (1630)
T 1xi4_A 1190 INGPNNAHIQQVGDRCYD-EKMYDAAKLLYNNV--------SNFGRLASTLVHLGEYQA 1239 (1630)
T ss_pred HhCCCHHHHHHHHHHHHh-cCCHHHHHHHHHhh--------hHHHHHHHHHHHhCCHHH
Confidence 1234456666555 66666666666654 245555555555555544
No 217
>1b89_A Protein (clathrin heavy chain); triskelion, coated vesicles, endocytosis, SELF- assembly, alpha-alpha superhelix; 2.60A {Bos taurus} SCOP: a.118.1.3
Probab=98.86 E-value=2e-08 Score=62.02 Aligned_cols=95 Identities=17% Similarity=0.191 Sum_probs=62.5
Q ss_pred cchhcHHHHHHHHHHHHhhCCChhHHHHHHHHHHHhhcChhhHHHHHHHHhccCCCCHHHHHHHHHHHHHhcCCHHHHHH
Q psy12719 5 GDRERVEQSLKEFRNFVDTHSNVVEACTLFAQVLVDQEDFDGAEEYFNRSIRVDPENASLYVHRAMLMLQARGNVDEAIK 84 (116)
Q Consensus 5 ~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ 84 (116)
...|++++|++.+.++ +++.+|...+.++...|+++.|..+... +...|+. ...+...|.+ .|.+++++.
T Consensus 159 ~~Lg~yq~AVea~~KA-----~~~~~Wk~v~~aCv~~~ef~lA~~~~l~-L~~~ad~---l~~lv~~Yek-~G~~eEai~ 228 (449)
T 1b89_A 159 VHLGEYQAAVDGARKA-----NSTRTWKEVCFACVDGKEFRLAQMCGLH-IVVHADE---LEELINYYQD-RGYFEELIT 228 (449)
T ss_dssp HTTTCHHHHHHHHHHH-----TCHHHHHHHHHHHHHTTCHHHHHHTTTT-TTTCHHH---HHHHHHHHHH-TTCHHHHHH
T ss_pred HHhccHHHHHHHHHHc-----CCchhHHHHHHHHHHcCcHHHHHHHHHH-HHhCHhh---HHHHHHHHHH-CCCHHHHHH
Confidence 3455556666666555 2455555555556666666666554443 2233333 3345566555 899999999
Q ss_pred HHHHHHhcCCCcHHHHHHHHHHHHh
Q psy12719 85 LIEKAISIDKSCMFAYETLGTIEVQ 109 (116)
Q Consensus 85 ~~~~~~~~~~~~~~~~~~l~~~~~~ 109 (116)
.+++++..++.....+..++.++.+
T Consensus 229 lLe~aL~le~ah~~~ftel~il~~k 253 (449)
T 1b89_A 229 MLEAALGLERAHMGMFTELAILYSK 253 (449)
T ss_dssp HHHHHTTSTTCCHHHHHHHHHHHHT
T ss_pred HHHHHhCCcHHHHHHHHHHHHHHHh
Confidence 9999999999999999999888764
No 218
>4e6h_A MRNA 3'-END-processing protein RNA14; HAT domain, heat repeat, CLP1, PCF11, structural protein; 2.30A {Kluyveromyces lactis} PDB: 4e85_A 4eba_A
Probab=98.78 E-value=1.2e-07 Score=61.60 Aligned_cols=108 Identities=9% Similarity=-0.011 Sum_probs=83.0
Q ss_pred chhcHHHHHHHHHHHHhh-CCChhHHHHHHHHHHHhhc-ChhhHHHHHHHHhccCCCCHHHHHHHHHHHHHhcCCHHHHH
Q psy12719 6 DRERVEQSLKEFRNFVDT-HSNVVEACTLFAQVLVDQE-DFDGAEEYFNRSIRVDPENASLYVHRAMLMLQARGNVDEAI 83 (116)
Q Consensus 6 ~~~~~~~A~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~-~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~a~ 83 (116)
+.|..+.|...|.++++. .+....+|...+.+....+ +++.|..+|+.+++..|+++..|...+..... .|+.+.|.
T Consensus 446 R~~~l~~AR~vf~~A~~~~~~~~~~lyi~~A~lE~~~~~d~e~Ar~ife~~Lk~~p~~~~~w~~y~~fe~~-~~~~~~AR 524 (679)
T 4e6h_A 446 RIQGLAASRKIFGKCRRLKKLVTPDIYLENAYIEYHISKDTKTACKVLELGLKYFATDGEYINKYLDFLIY-VNEESQVK 524 (679)
T ss_dssp HHHCHHHHHHHHHHHHHTGGGSCTHHHHHHHHHHHTTTSCCHHHHHHHHHHHHHHTTCHHHHHHHHHHHHH-HTCHHHHH
T ss_pred HcCCHHHHHHHHHHHHHhcCCCChHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHCCCchHHHHHHHHHHHh-CCCHHHHH
Confidence 356778888889888877 4445667777777666654 48899999999999888888888888877555 78899999
Q ss_pred HHHHHHHhcCC---CcHHHHHHHHHHHHhhcccc
Q psy12719 84 KLIEKAISIDK---SCMFAYETLGTIEVQRTFVV 114 (116)
Q Consensus 84 ~~~~~~~~~~~---~~~~~~~~l~~~~~~~~~~~ 114 (116)
..|++++...| ....+|..........|+.+
T Consensus 525 ~lferal~~~~~~~~~~~lw~~~~~fE~~~G~~~ 558 (679)
T 4e6h_A 525 SLFESSIDKISDSHLLKMIFQKVIFFESKVGSLN 558 (679)
T ss_dssp HHHHHHTTTSSSTTHHHHHHHHHHHHHHHTCCSH
T ss_pred HHHHHHHHhcCCHHHHHHHHHHHHHHHHHcCCHH
Confidence 99999988877 35667777777777777654
No 219
>3qwp_A SET and MYND domain-containing protein 3; SMYD3,SET and MYND domain, zinc finger MYND domain-containin 1, structural genomics; HET: SAM; 1.53A {Homo sapiens} PDB: 3mek_A* 3oxg_A* 3oxf_A* 3pdn_A* 3oxl_A* 3ru0_A*
Probab=98.77 E-value=1.1e-07 Score=58.76 Aligned_cols=80 Identities=9% Similarity=0.030 Sum_probs=66.0
Q ss_pred HHHHhhcChhhHHHHHHHHhcc-----CCCC---HHHHHHHHHHHHHhcCCHHHHHHHHHHHHhc--------CCCcHHH
Q psy12719 36 QVLVDQEDFDGAEEYFNRSIRV-----DPEN---ASLYVHRAMLMLQARGNVDEAIKLIEKAISI--------DKSCMFA 99 (116)
Q Consensus 36 ~~~~~~~~~~~A~~~~~~a~~~-----~~~~---~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~--------~~~~~~~ 99 (116)
.-+..+|++++|+..+++++.+ .|++ ...+.++|.+|.. +|++++|+..+++++.. +|.....
T Consensus 295 e~~~~~g~~~~a~~~~~~~L~~~~~~lg~~h~~~~~~~~~L~~~y~~-~g~~~eA~~~~~~~L~i~~~~lg~~Hp~~a~~ 373 (429)
T 3qwp_A 295 EELKAHWKWEQVLAMCQAIISSNSERLPDINIYQLKVLDCAMDACIN-LGLLEEALFYGTRTMEPYRIFFPGSHPVRGVQ 373 (429)
T ss_dssp HHHHHTTCHHHHHHHHHHHHTCSSCCCCTTSHHHHHHHHHHHHHHHH-HTCHHHHHHHHHHHHHHHHHHSCSSCHHHHHH
T ss_pred HHHHhhccHHHHHHHHHHHHHhccCcCCccchHHHHHHHHHHHHHHh-hccHHHHHHHHHHHHHhHHHHcCCCChHHHHH
Confidence 3355789999999999999865 3444 4578899999877 89999999999999975 4445677
Q ss_pred HHHHHHHHHhhcccccC
Q psy12719 100 YETLGTIEVQRTFVVLW 116 (116)
Q Consensus 100 ~~~l~~~~~~~~~~~~a 116 (116)
+.++|.++..+|++++|
T Consensus 374 l~nLa~~~~~~g~~~eA 390 (429)
T 3qwp_A 374 VMKVGKLQLHQGMFPQA 390 (429)
T ss_dssp HHHHHHHHHHTTCHHHH
T ss_pred HHHHHHHHHhcCCHHHH
Confidence 89999999999999875
No 220
>3o48_A Mitochondria fission 1 protein; tetratricopeptide repeat fold, TPR, scaffold, peroxisome, membrane fission, protein binding; 1.75A {Saccharomyces cerevisiae} PDB: 2pqr_A 2pqn_A 3uux_A
Probab=98.75 E-value=6.3e-07 Score=46.46 Aligned_cols=99 Identities=7% Similarity=-0.005 Sum_probs=75.0
Q ss_pred hcHHHHHHHHHHHHhhCCChhHHHHHHHHHHHhhc---ChhhHHHHHHHHhccCC-CCHHHHHHHHHHHHHhcCCHHHHH
Q psy12719 8 ERVEQSLKEFRNFVDTHSNVVEACTLFAQVLVDQE---DFDGAEEYFNRSIRVDP-ENASLYVHRAMLMLQARGNVDEAI 83 (116)
Q Consensus 8 ~~~~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~A~~~~~~a~~~~~-~~~~~~~~~~~~~~~~~~~~~~a~ 83 (116)
.+.....+.|..-. ....++.+.+.+|.++.+.. +...++..+...++.+| .....++.+|..+++ .|+|++|.
T Consensus 21 eeL~~l~~qy~~E~-~~~vs~qt~F~yAw~Lv~S~~~~d~~~GI~LLe~l~~~~~~~~Rd~LYyLAvg~yk-lgdY~~Ar 98 (134)
T 3o48_A 21 QQLEILRQQVVSEG-GPTATIQSRFNYAWGLIKSTDVNDERLGVKILTDIYKEAESRRRECLYYLTIGCYK-LGEYSMAK 98 (134)
T ss_dssp HHHHHHHHHHHHTT-GGGSCHHHHHHHHHHHHHSSCHHHHHHHHHHHHHHHHHCGGGHHHHHHHHHHHHHH-HTCHHHHH
T ss_pred HHHHHHHHHHHHHh-CCCCChhhHHHHHHHHHcCCCHHHHHHHHHHHHHHHhcCcchhHHHHHHHHHHHHH-hhhHHHHH
Confidence 34444455554433 23334678889998887655 45678999999998888 457789999999998 89999999
Q ss_pred HHHHHHHhcCCCcHHHHHHHHHHHH
Q psy12719 84 KLIEKAISIDKSCMFAYETLGTIEV 108 (116)
Q Consensus 84 ~~~~~~~~~~~~~~~~~~~l~~~~~ 108 (116)
++.+.+++..|++..+......+..
T Consensus 99 ~y~d~lL~~eP~N~QA~~Lk~~Ie~ 123 (134)
T 3o48_A 99 RYVDTLFEHERNNKQVGALKSMVED 123 (134)
T ss_dssp HHHHHHHTTCTTCHHHHHHHHHHHH
T ss_pred HHHHHHHhhCCCCHHHHHHHHHHHH
Confidence 9999999999999877665555543
No 221
>1y8m_A FIS1; mitochondria, unknown function; NMR {Saccharomyces cerevisiae} SCOP: a.118.8.1
Probab=98.69 E-value=2.7e-06 Score=44.62 Aligned_cols=98 Identities=7% Similarity=0.008 Sum_probs=75.1
Q ss_pred hcHHHHHHHHHHHHhhCCChhHHHHHHHHHHHhhcC---hhhHHHHHHHHhccCCC-CHHHHHHHHHHHHHhcCCHHHHH
Q psy12719 8 ERVEQSLKEFRNFVDTHSNVVEACTLFAQVLVDQED---FDGAEEYFNRSIRVDPE-NASLYVHRAMLMLQARGNVDEAI 83 (116)
Q Consensus 8 ~~~~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~A~~~~~~a~~~~~~-~~~~~~~~~~~~~~~~~~~~~a~ 83 (116)
.+.....+.|..-.. .+.+.++.+++|.++.+... ..+++..++..++..|. ....+|.+|..+++ +|+|++|.
T Consensus 20 eeL~~lr~qY~~E~~-~~vs~~t~F~YAw~Lv~S~~~~di~~GI~LLe~l~~~~~~~~RdcLYyLAvg~yk-l~~Y~~Ar 97 (144)
T 1y8m_A 20 QQLEILRQQVVSEGG-PTATIQSRFNYAWGLIKSTDVNDERLGVKILTDIYKEAESRRRECLYYLTIGCYK-LGEYSMAK 97 (144)
T ss_dssp HHHHHHHHHHHHTTS-TTSCHHHHHHHHHHHHHSSSHHHHHHHHHHHHHHHHHCCSTHHHHHHHHHHHHHT-TTCHHHHH
T ss_pred HHHHHHHHHHHHhcc-CCCcHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHhcCccchhHHHHHHHHHHHH-hhhHHHHH
Confidence 344445555554322 34567888999998887654 56789999999998884 56789999999888 99999999
Q ss_pred HHHHHHHhcCCCcHHHHHHHHHHH
Q psy12719 84 KLIEKAISIDKSCMFAYETLGTIE 107 (116)
Q Consensus 84 ~~~~~~~~~~~~~~~~~~~l~~~~ 107 (116)
++.+.+++..|++..+......+.
T Consensus 98 ~y~d~lL~~eP~n~QA~~Lk~~Ie 121 (144)
T 1y8m_A 98 RYVDTLFEHERNNKQVGALKSMVE 121 (144)
T ss_dssp HHHHHHHHTCCCCHHHHHHHHHHH
T ss_pred HHHHHHHhcCCCcHHHHHHHHHHH
Confidence 999999999999977666554444
No 222
>4h7y_A Dual specificity protein kinase TTK; mitotic checkpoint kinase, chromosome instability, cancer, tetratricopeptide repeat (TPR) motif; 1.80A {Homo sapiens} PDB: 4h7x_A
Probab=98.61 E-value=3.4e-07 Score=48.47 Aligned_cols=87 Identities=17% Similarity=0.219 Sum_probs=72.4
Q ss_pred HHHHHHHHHHHhhCCCh--------hHHHHHHHHHHHhhcChhhHHHHHHHHhccCCCCHHHHHHHHHHHHHhcCCHHHH
Q psy12719 11 EQSLKEFRNFVDTHSNV--------VEACTLFAQVLVDQEDFDGAEEYFNRSIRVDPENASLYVHRAMLMLQARGNVDEA 82 (116)
Q Consensus 11 ~~A~~~~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~a 82 (116)
++-++.|++++..-|.. ...|..++.. ...++.++|...|+.+++.....+.+|...|....+ +|+...|
T Consensus 36 ~rlrd~YerAia~~Pp~k~~~wrrYI~LWIrYA~~-~ei~D~d~aR~vy~~a~~~hKkFAKiwi~~AqFEiR-qgnl~kA 113 (161)
T 4h7y_A 36 NKLIGRYSQAIEALPPDKYGQNESFARIQVRFAEL-KAIQEPDDARDYFQMARANCKKFAFVHISFAQFELS-QGNVKKS 113 (161)
T ss_dssp HHHHHHHHHHHHHSCGGGGTTCHHHHHHHHHHHHH-HHHHCGGGCHHHHHHHHHHCTTBHHHHHHHHHHHHH-TTCHHHH
T ss_pred HHHHHHHHHHHHcCCccccccHHHHHHHHHHHHHH-HHhcCHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHH-cccHHHH
Confidence 77788999999887654 2356666655 567999999999999998888888899999998777 8999999
Q ss_pred HHHHHHHHhcCCCcHHH
Q psy12719 83 IKLIEKAISIDKSCMFA 99 (116)
Q Consensus 83 ~~~~~~~~~~~~~~~~~ 99 (116)
.+.+.+++...|.....
T Consensus 114 RkILg~AiG~~~k~~~~ 130 (161)
T 4h7y_A 114 KQLLQKAVERGAVPLEM 130 (161)
T ss_dssp HHHHHHHHHTTCBCHHH
T ss_pred HHHHHHHhccCCCcHHH
Confidence 99999999999886554
No 223
>3ffl_A Anaphase-promoting complex subunit 7; tetratricopeptide repeat motif, helis-turn-helix, cell cycle division, mitosis, TPR repeat; 2.50A {Homo sapiens}
Probab=98.60 E-value=8.9e-07 Score=47.63 Aligned_cols=100 Identities=8% Similarity=0.016 Sum_probs=73.6
Q ss_pred chhcHHHHHHHHHHHHhhCCChh---------HHHHHHHHHHHhhcChhhHHHHHHHHhccC---CCC------------
Q psy12719 6 DRERVEQSLKEFRNFVDTHSNVV---------EACTLFAQVLVDQEDFDGAEEYFNRSIRVD---PEN------------ 61 (116)
Q Consensus 6 ~~~~~~~A~~~~~~~~~~~~~~~---------~~~~~~~~~~~~~~~~~~A~~~~~~a~~~~---~~~------------ 61 (116)
+.+.|+.|+-....++....+++ .+...+|++++..++|..|...|++++... ++.
T Consensus 32 d~~LY~sA~~La~lLlSl~~~~~~~~sp~~~~~~l~~ladalf~~~eyrrA~~~y~qALq~~k~l~k~~s~~~~~~~~ss 111 (167)
T 3ffl_A 32 AAGLHSNVRLLSSLLLTLSNNNPELFSPPQKYQLLVYHADSLFHDKEYRNAVSKYTMALQQKKALSKTSKVRPSTGNSAS 111 (167)
T ss_dssp HTTCHHHHHHHHHHHHHHHHHSTTSSCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHCC---------------
T ss_pred HhhhHHHHHHHHHHHHHhhcCCcccccHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHhcCCCccccccccCC
Confidence 45778888888888665543322 378899999999999999999999986431 111
Q ss_pred ----------HHHHHHHHHHHHHhcCCHHHHHHHHHHHHhcCCCcHHHHHHHHHHH
Q psy12719 62 ----------ASLYVHRAMLMLQARGNVDEAIKLIEKAISIDKSCMFAYETLGTIE 107 (116)
Q Consensus 62 ----------~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~l~~~~ 107 (116)
.++.+.++.|+.. .+++++|+..++.. ......+.+-..||+.|
T Consensus 112 ~p~s~~~~~e~Elkykia~C~~~-l~~~~~Ai~~Le~I-p~k~Rt~kvnm~LakLy 165 (167)
T 3ffl_A 112 TPQSQCLPSEIEVKYKLAECYTV-LKQDKDAIAILDGI-PSRQRTPKINMLLANLY 165 (167)
T ss_dssp -----CCCCHHHHHHHHHHHHHH-TTCHHHHHHHHHTS-CGGGCCHHHHHHHHHHC
T ss_pred CcccccccchHHHHHHHHHHHHH-HCCHHHHHHHHhcC-CchhcCHHHHHHHHHHh
Confidence 2578999999888 99999999988643 22334566777777765
No 224
>2uy1_A Cleavage stimulation factor 77; RNA-binding protein; 2.0A {Encephalitozoon cuniculi} PDB: 2uy1_B
Probab=98.54 E-value=3.7e-06 Score=52.91 Aligned_cols=107 Identities=7% Similarity=0.045 Sum_probs=72.9
Q ss_pred chhcHHHHHHHHHHHHhhCCChhHHHHHHHH----------------------------------------HHHhhcChh
Q psy12719 6 DRERVEQSLKEFRNFVDTHSNVVEACTLFAQ----------------------------------------VLVDQEDFD 45 (116)
Q Consensus 6 ~~~~~~~A~~~~~~~~~~~~~~~~~~~~~~~----------------------------------------~~~~~~~~~ 45 (116)
..|+.++|...|++++.. |.+...|...+. ...+.++.+
T Consensus 225 ~~~~~~~ar~i~erAi~~-P~~~~l~~~y~~~~e~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~lw~~y~~~~~r~~~~~ 303 (493)
T 2uy1_A 225 GIGQKEKAKKVVERGIEM-SDGMFLSLYYGLVMDEEAVYGDLKRKYSMGEAESAEKVFSKELDLLRINHLNYVLKKRGLE 303 (493)
T ss_dssp HTTCHHHHHHHHHHHHHH-CCSSHHHHHHHHHTTCTHHHHHHHHHTC----------CHHHHHHHHHHHHHHHHHHHCHH
T ss_pred HcCCHHHHHHHHHHHHhC-CCcHHHHHHHHhhcchhHHHHHHHHHHHhhccchhhhhcccccHHHHHHHHHHHHHcCCHH
Confidence 456777888888888877 776544433332 233466778
Q ss_pred hHHHHHHHHhccCCCCHHHHHHHHHHHHHhcCCHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHhhcccc
Q psy12719 46 GAEEYFNRSIRVDPENASLYVHRAMLMLQARGNVDEAIKLIEKAISIDKSCMFAYETLGTIEVQRTFVV 114 (116)
Q Consensus 46 ~A~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~ 114 (116)
.|...|.++ ...+.....|...+.+.+...++.+.|...++.+++..|+.+..|...+......|+.+
T Consensus 304 ~AR~i~~~A-~~~~~~~~v~i~~A~lE~~~~~d~~~ar~ife~al~~~~~~~~~~~~yid~e~~~~~~~ 371 (493)
T 2uy1_A 304 LFRKLFIEL-GNEGVGPHVFIYCAFIEYYATGSRATPYNIFSSGLLKHPDSTLLKEEFFLFLLRIGDEE 371 (493)
T ss_dssp HHHHHHHHH-TTSCCCHHHHHHHHHHHHHHHCCSHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHTCHH
T ss_pred HHHHHHHHh-hCCCCChHHHHHHHHHHHHHCCChHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHcCCHH
Confidence 888888888 43334566676667665553346888999999998888888877777776666666544
No 225
>4g26_A Pentatricopeptide repeat-containing protein AT2G3 mitochondrial; metallonuclease, prorp, ribonuclease, PIN, tRNA processing, NYN domain; 1.75A {Arabidopsis thaliana} PDB: 4g23_A* 4g25_A 4g24_A
Probab=98.49 E-value=1.6e-05 Score=50.20 Aligned_cols=110 Identities=10% Similarity=0.058 Sum_probs=82.0
Q ss_pred chhcHHHHHHHHHHHHhhC-CChhHHHHHHHHHHHhhcChhhHHHHHHHHhccC-CCCHHHHHHHHHHHHHhcCCHHHHH
Q psy12719 6 DRERVEQSLKEFRNFVDTH-SNVVEACTLFAQVLVDQEDFDGAEEYFNRSIRVD-PENASLYVHRAMLMLQARGNVDEAI 83 (116)
Q Consensus 6 ~~~~~~~A~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~A~~~~~~a~~~~-~~~~~~~~~~~~~~~~~~~~~~~a~ 83 (116)
..+..++|.+.|++..... +.+..++..+-..+.+.|++++|..++++..... +.+...|..+-..+.+ .|+.++|.
T Consensus 82 ~~~~l~~A~~lf~~M~~~G~~Pd~~tyn~lI~~~~~~g~~~~A~~l~~~M~~~g~~Pd~~tyn~lI~~~~~-~g~~~~A~ 160 (501)
T 4g26_A 82 PNPGLSRGFDIFKQMIVDKVVPNEATFTNGARLAVAKDDPEMAFDMVKQMKAFGIQPRLRSYGPALFGFCR-KGDADKAY 160 (501)
T ss_dssp CCHHHHHHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHTTCCCCHHHHHHHHHHHHH-TTCHHHHH
T ss_pred hcchHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHhcCCHHHHHHHHHHHHHcCCCCccceehHHHHHHHH-CCCHHHHH
Confidence 3466888999998887654 2245677888888899999999999998887653 2355666667666677 89999999
Q ss_pred HHHHHHHhcCC-CcHHHHHHHHHHHHhhcccccC
Q psy12719 84 KLIEKAISIDK-SCMFAYETLGTIEVQRTFVVLW 116 (116)
Q Consensus 84 ~~~~~~~~~~~-~~~~~~~~l~~~~~~~~~~~~a 116 (116)
+.+.+..+..- -+...+..+-..+...|+.++|
T Consensus 161 ~l~~~M~~~G~~Pd~~ty~~Li~~~~~~g~~d~A 194 (501)
T 4g26_A 161 EVDAHMVESEVVPEEPELAALLKVSMDTKNADKV 194 (501)
T ss_dssp HHHHHHHHTTCCCCHHHHHHHHHHHHHTTCHHHH
T ss_pred HHHHHHHhcCCCCCHHHHHHHHHHHhhCCCHHHH
Confidence 99998877532 2345688888888888887654
No 226
>3o48_A Mitochondria fission 1 protein; tetratricopeptide repeat fold, TPR, scaffold, peroxisome, membrane fission, protein binding; 1.75A {Saccharomyces cerevisiae} PDB: 2pqr_A 2pqn_A 3uux_A
Probab=98.48 E-value=2.4e-06 Score=44.32 Aligned_cols=66 Identities=11% Similarity=0.130 Sum_probs=57.6
Q ss_pred chhcHHHHHHHHHHHHhhCCC-hhHHHHHHHHHHHhhcChhhHHHHHHHHhccCCCCHHHHHHHHHH
Q psy12719 6 DRERVEQSLKEFRNFVDTHSN-VVEACTLFAQVLVDQEDFDGAEEYFNRSIRVDPENASLYVHRAML 71 (116)
Q Consensus 6 ~~~~~~~A~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~~~~~ 71 (116)
...+..+++.+++..++..|. .-+.++.+|..+.+.|+|++|..+.+.+++..|.+..+......+
T Consensus 55 ~~~d~~~GI~LLe~l~~~~~~~~Rd~LYyLAvg~yklgdY~~Ar~y~d~lL~~eP~N~QA~~Lk~~I 121 (134)
T 3o48_A 55 DVNDERLGVKILTDIYKEAESRRRECLYYLTIGCYKLGEYSMAKRYVDTLFEHERNNKQVGALKSMV 121 (134)
T ss_dssp CHHHHHHHHHHHHHHHHHCGGGHHHHHHHHHHHHHHHTCHHHHHHHHHHHHTTCTTCHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHHhcCcchhHHHHHHHHHHHHHhhhHHHHHHHHHHHHhhCCCCHHHHHHHHHH
Confidence 455778999999999999985 477999999999999999999999999999999998877655544
No 227
>1nzn_A CGI-135 protein, fission protein FIS1P; TPR, unknown function; 2.00A {Homo sapiens} SCOP: a.118.8.1 PDB: 1iyg_A
Probab=98.44 E-value=1.6e-06 Score=44.69 Aligned_cols=66 Identities=8% Similarity=0.168 Sum_probs=56.1
Q ss_pred chhcHHHHHHHHHHHHhhC-C-ChhHHHHHHHHHHHhhcChhhHHHHHHHHhccCCCCHHHHHHHHHH
Q psy12719 6 DRERVEQSLKEFRNFVDTH-S-NVVEACTLFAQVLVDQEDFDGAEEYFNRSIRVDPENASLYVHRAML 71 (116)
Q Consensus 6 ~~~~~~~A~~~~~~~~~~~-~-~~~~~~~~~~~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~~~~~ 71 (116)
...+..+++.+++..++.. | ..-+..+.+|..+++.|+|++|+.+++.+++..|.+..+......+
T Consensus 50 ~~~d~~~GI~lLe~l~~~~~p~~~Rd~lY~LAvg~yklg~Y~~A~~~~~~lL~~eP~n~QA~~Lk~~i 117 (126)
T 1nzn_A 50 YNDDIRKGIVLLEELLPKGSKEEQRDYVFYLAVGNYRLKEYEKALKYVRGLLQTEPQNNQAKELERLI 117 (126)
T ss_dssp SHHHHHHHHHHHHHHTTTSCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHHhcCCcchHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHhCCCCHHHHHHHHHH
Confidence 3456677999999999887 5 4567899999999999999999999999999999998887655544
No 228
>4h7y_A Dual specificity protein kinase TTK; mitotic checkpoint kinase, chromosome instability, cancer, tetratricopeptide repeat (TPR) motif; 1.80A {Homo sapiens} PDB: 4h7x_A
Probab=98.42 E-value=2.4e-05 Score=41.55 Aligned_cols=39 Identities=18% Similarity=0.118 Sum_probs=19.7
Q ss_pred cCCHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHhhcccc
Q psy12719 76 RGNVDEAIKLIEKAISIDKSCMFAYETLGTIEVQRTFVV 114 (116)
Q Consensus 76 ~~~~~~a~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~ 114 (116)
.++.++|.+.|+.+++.+...+.+|...|....++|+.+
T Consensus 73 i~D~d~aR~vy~~a~~~hKkFAKiwi~~AqFEiRqgnl~ 111 (161)
T 4h7y_A 73 IQEPDDARDYFQMARANCKKFAFVHISFAQFELSQGNVK 111 (161)
T ss_dssp HHCGGGCHHHHHHHHHHCTTBHHHHHHHHHHHHHTTCHH
T ss_pred hcCHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHcccHH
Confidence 355555555555555444444555555555555554443
No 229
>1y8m_A FIS1; mitochondria, unknown function; NMR {Saccharomyces cerevisiae} SCOP: a.118.8.1
Probab=98.34 E-value=7.9e-06 Score=42.90 Aligned_cols=66 Identities=11% Similarity=0.130 Sum_probs=57.0
Q ss_pred chhcHHHHHHHHHHHHhhCCC-hhHHHHHHHHHHHhhcChhhHHHHHHHHhccCCCCHHHHHHHHHH
Q psy12719 6 DRERVEQSLKEFRNFVDTHSN-VVEACTLFAQVLVDQEDFDGAEEYFNRSIRVDPENASLYVHRAML 71 (116)
Q Consensus 6 ~~~~~~~A~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~~~~~ 71 (116)
...+..+++.+++..++..|. .-+..+.+|..+.+.|+|++|..+.+.+++..|.+..+......+
T Consensus 54 ~~~di~~GI~LLe~l~~~~~~~~RdcLYyLAvg~ykl~~Y~~Ar~y~d~lL~~eP~n~QA~~Lk~~I 120 (144)
T 1y8m_A 54 DVNDERLGVKILTDIYKEAESRRRECLYYLTIGCYKLGEYSMAKRYVDTLFEHERNNKQVGALKSMV 120 (144)
T ss_dssp SHHHHHHHHHHHHHHHHHCCSTHHHHHHHHHHHHHTTTCHHHHHHHHHHHHHTCCCCHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHHhcCccchhHHHHHHHHHHHHhhhHHHHHHHHHHHHhcCCCcHHHHHHHHHH
Confidence 456678899999999998885 467899999999999999999999999999999998876655444
No 230
>4gns_B Protein CSD3, chitin biosynthesis protein CHS6; FN3, BRCT, tetratricopeptide repeat, cargo adaptor, transpor; HET: EPE; 2.75A {Saccharomyces cerevisiae}
Probab=98.31 E-value=7.9e-06 Score=53.78 Aligned_cols=105 Identities=10% Similarity=0.123 Sum_probs=73.9
Q ss_pred HHHHHHHHHHHHhhCCChhHHHHHHHHHHH---hhcChhhHHHHHHHHhc--------cCCCC----------HHHHHHH
Q psy12719 10 VEQSLKEFRNFVDTHSNVVEACTLFAQVLV---DQEDFDGAEEYFNRSIR--------VDPEN----------ASLYVHR 68 (116)
Q Consensus 10 ~~~A~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~A~~~~~~a~~--------~~~~~----------~~~~~~~ 68 (116)
++.|+..+++....+|..... ...+.+.. ...+--+|+....+.++ ..+.+ ...+...
T Consensus 265 ~~~a~~~le~L~~~~p~~~~~-~~~~~i~~~~~~~~~Ev~av~ll~~~l~~~~~~~~~l~~~~~~~~~~~~~~~~LL~~Q 343 (754)
T 4gns_B 265 VDFTIDYLKGLTKKDPIHDIY-YKTAMITILDHIETKELDMITILNETLDPLLSLLNDLPPRDADSARLMNCMSDLLNIQ 343 (754)
T ss_dssp HHHHHHHHHHHHHHCGGGHHH-HHHHHHHHHTTCGGGHHHHHHHHHHHHHHHHHHHHTCSSCCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhhCCchhHH-HHHHHHHHHHHhhhhhHHHHHHHHHHHHHhhhhhhhhcccccccccccCcchHHHHHH
Confidence 577999999999988875432 22222221 12334456666666653 22222 2234444
Q ss_pred HHHHHHhcCCHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHhhcccccC
Q psy12719 69 AMLMLQARGNVDEAIKLIEKAISIDKSCMFAYETLGTIEVQRTFVVLW 116 (116)
Q Consensus 69 ~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~a 116 (116)
+..+.. .|+++-|.+..++++...|.....|..|+.+|..+|+++.|
T Consensus 344 a~FLl~-K~~~elAL~~Ak~AV~~aPseF~tW~~La~vYi~l~d~e~A 390 (754)
T 4gns_B 344 TNFLLN-RGDYELALGVSNTSTELALDSFESWYNLARCHIKKEEYEKA 390 (754)
T ss_dssp HHHHHH-TTCHHHHHHHHHHHHHHCSSCHHHHHHHHHHHHHTTCHHHH
T ss_pred HHHHhc-cCcHHHHHHHHHHHHhcCchhhHHHHHHHHHHHHhccHHHH
Confidence 555555 89999999999999999999999999999999999999875
No 231
>4g26_A Pentatricopeptide repeat-containing protein AT2G3 mitochondrial; metallonuclease, prorp, ribonuclease, PIN, tRNA processing, NYN domain; 1.75A {Arabidopsis thaliana} PDB: 4g23_A* 4g25_A 4g24_A
Probab=98.24 E-value=0.00012 Score=46.33 Aligned_cols=113 Identities=10% Similarity=0.055 Sum_probs=83.5
Q ss_pred cccchhcHHHHHHHHHHHHhhC-CChhHHHHHHHHHHHhhc---------ChhhHHHHHHHHhccC-CCCHHHHHHHHHH
Q psy12719 3 VPGDRERVEQSLKEFRNFVDTH-SNVVEACTLFAQVLVDQE---------DFDGAEEYFNRSIRVD-PENASLYVHRAML 71 (116)
Q Consensus 3 ~~~~~~~~~~A~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~---------~~~~A~~~~~~a~~~~-~~~~~~~~~~~~~ 71 (116)
.+.+.|+.++|++.|+++.... +.+...+..+-..+...+ ..+.|...|++..... +.+..++..+...
T Consensus 35 ~c~k~G~~~~A~~lf~~M~~~Gv~pd~~tyn~Li~~c~~~~~~~~~~~~~~l~~A~~lf~~M~~~G~~Pd~~tyn~lI~~ 114 (501)
T 4g26_A 35 MCSKKGDVLEALRLYDEARRNGVQLSQYHYNVLLYVCSLAEAATESSPNPGLSRGFDIFKQMIVDKVVPNEATFTNGARL 114 (501)
T ss_dssp HTTTSCCHHHHHHHHHHHHHHTCCCCHHHHHHHHHHHTTCCCCSSSSCCHHHHHHHHHHHHHHHTTCCCCHHHHHHHHHH
T ss_pred HHHhCCCHHHHHHHHHHHHHcCCCCCHhHHHHHHHHHHhCCchhhhhhcchHHHHHHHHHHHHHhCCCCCHHHHHHHHHH
Confidence 3567899999999999998764 223455666655555443 4678999998877653 2356677777777
Q ss_pred HHHhcCCHHHHHHHHHHHHhcC-CCcHHHHHHHHHHHHhhcccccC
Q psy12719 72 MLQARGNVDEAIKLIEKAISID-KSCMFAYETLGTIEVQRTFVVLW 116 (116)
Q Consensus 72 ~~~~~~~~~~a~~~~~~~~~~~-~~~~~~~~~l~~~~~~~~~~~~a 116 (116)
+.+ .|+.++|.+.+.+..... +-+...|..+-..+...|+.++|
T Consensus 115 ~~~-~g~~~~A~~l~~~M~~~g~~Pd~~tyn~lI~~~~~~g~~~~A 159 (501)
T 4g26_A 115 AVA-KDDPEMAFDMVKQMKAFGIQPRLRSYGPALFGFCRKGDADKA 159 (501)
T ss_dssp HHH-HTCHHHHHHHHHHHHHTTCCCCHHHHHHHHHHHHHTTCHHHH
T ss_pred HHh-cCCHHHHHHHHHHHHHcCCCCccceehHHHHHHHHCCCHHHH
Confidence 777 899999999999988753 23456788888888888887754
No 232
>2uy1_A Cleavage stimulation factor 77; RNA-binding protein; 2.0A {Encephalitozoon cuniculi} PDB: 2uy1_B
Probab=98.23 E-value=3.9e-05 Score=48.35 Aligned_cols=103 Identities=12% Similarity=0.098 Sum_probs=78.8
Q ss_pred chhcHHHHHHHHHHHHhhCCChhHHHHHHHHHHHhhc-ChhhHHHHHHHHhccCCCCHHHHHHHHHHHHHhcCCHHHHHH
Q psy12719 6 DRERVEQSLKEFRNFVDTHSNVVEACTLFAQVLVDQE-DFDGAEEYFNRSIRVDPENASLYVHRAMLMLQARGNVDEAIK 84 (116)
Q Consensus 6 ~~~~~~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ 84 (116)
+.++.+.|...|+++ ...+....+|...+.+-...+ +.+.|...|+.+++..|+.+..+...+..... .|+.+.|..
T Consensus 298 r~~~~~~AR~i~~~A-~~~~~~~~v~i~~A~lE~~~~~d~~~ar~ife~al~~~~~~~~~~~~yid~e~~-~~~~~~aR~ 375 (493)
T 2uy1_A 298 KKRGLELFRKLFIEL-GNEGVGPHVFIYCAFIEYYATGSRATPYNIFSSGLLKHPDSTLLKEEFFLFLLR-IGDEENARA 375 (493)
T ss_dssp HHHCHHHHHHHHHHH-TTSCCCHHHHHHHHHHHHHHHCCSHHHHHHHHHHHHHCTTCHHHHHHHHHHHHH-HTCHHHHHH
T ss_pred HcCCHHHHHHHHHHh-hCCCCChHHHHHHHHHHHHHCCChHHHHHHHHHHHHHCCCCHHHHHHHHHHHHH-cCCHHHHHH
Confidence 356788999999999 433334567777777766656 69999999999999999999888888776555 899999999
Q ss_pred HHHHHHhcCCCcHHHHHHHHHHHHhhcccc
Q psy12719 85 LIEKAISIDKSCMFAYETLGTIEVQRTFVV 114 (116)
Q Consensus 85 ~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~ 114 (116)
.++++ +....+|..........|+.+
T Consensus 376 l~er~----~k~~~lw~~~~~fE~~~G~~~ 401 (493)
T 2uy1_A 376 LFKRL----EKTSRMWDSMIEYEFMVGSME 401 (493)
T ss_dssp HHHHS----CCBHHHHHHHHHHHHHHSCHH
T ss_pred HHHHH----HHHHHHHHHHHHHHHHCCCHH
Confidence 99887 345666777776666666543
No 233
>3ffl_A Anaphase-promoting complex subunit 7; tetratricopeptide repeat motif, helis-turn-helix, cell cycle division, mitosis, TPR repeat; 2.50A {Homo sapiens}
Probab=98.18 E-value=7.7e-06 Score=44.06 Aligned_cols=86 Identities=10% Similarity=-0.063 Sum_probs=66.0
Q ss_pred HHHHHHHHHHhhcChhhHHHHHHHHhccC---CCC------HHHHHHHHHHHHHhcCCHHHHHHHHHHHHhc------CC
Q psy12719 30 ACTLFAQVLVDQEDFDGAEEYFNRSIRVD---PEN------ASLYVHRAMLMLQARGNVDEAIKLIEKAISI------DK 94 (116)
Q Consensus 30 ~~~~~~~~~~~~~~~~~A~~~~~~a~~~~---~~~------~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~------~~ 94 (116)
++..-...+...+.|+.|+.....++... |+. ..++..+|..++. .++|.+|...|+++++. .+
T Consensus 22 ~l~dqik~L~d~~LY~sA~~La~lLlSl~~~~~~~~sp~~~~~~l~~ladalf~-~~eyrrA~~~y~qALq~~k~l~k~~ 100 (167)
T 3ffl_A 22 NVIDHVRDMAAAGLHSNVRLLSSLLLTLSNNNPELFSPPQKYQLLVYHADSLFH-DKEYRNAVSKYTMALQQKKALSKTS 100 (167)
T ss_dssp CHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHSTTSSCHHHHHHHHHHHHHHHHH-TTCHHHHHHHHHHHHHHHHCC----
T ss_pred HHHHHHHHHHHhhhHHHHHHHHHHHHHhhcCCcccccHHHHHHHHHHHHHHHHc-ccHHHHHHHHHHHHHHHHHHHhcCC
Confidence 45555667778999999999988876553 332 2378889999888 89999999999998764 11
Q ss_pred -------------------CcHHHHHHHHHHHHhhcccccC
Q psy12719 95 -------------------SCMFAYETLGTIEVQRTFVVLW 116 (116)
Q Consensus 95 -------------------~~~~~~~~l~~~~~~~~~~~~a 116 (116)
.+.++.+.++.|+...+++++|
T Consensus 101 s~~~~~~~~ss~p~s~~~~~e~Elkykia~C~~~l~~~~~A 141 (167)
T 3ffl_A 101 KVRPSTGNSASTPQSQCLPSEIEVKYKLAECYTVLKQDKDA 141 (167)
T ss_dssp ----------------CCCCHHHHHHHHHHHHHHTTCHHHH
T ss_pred CccccccccCCCcccccccchHHHHHHHHHHHHHHCCHHHH
Confidence 1136889999999999998764
No 234
>1ya0_A SMG-7 transcript variant 2; alpha-helical repeat, tetratricopetide repeat (TPR), 14-3-3, signaling protein; 2.55A {Homo sapiens} SCOP: a.118.8.1
Probab=98.16 E-value=6.2e-05 Score=47.52 Aligned_cols=79 Identities=16% Similarity=0.203 Sum_probs=70.5
Q ss_pred HHHHHHHHHHhhcChhhHHHHHHHHhccCCCCHHHHHHHHHHHHHhcCCHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHh
Q psy12719 30 ACTLFAQVLVDQEDFDGAEEYFNRSIRVDPENASLYVHRAMLMLQARGNVDEAIKLIEKAISIDKSCMFAYETLGTIEVQ 109 (116)
Q Consensus 30 ~~~~~~~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~l~~~~~~ 109 (116)
.+..+|.+......+..|..+|.+|..+.|.+...+..+|.+... .|+.-+|+-+|.+++......+.+..++...+..
T Consensus 154 ~l~~LGDL~RY~~~~~~A~~~Y~~A~~~~P~~G~~~nqLavla~~-~~~~l~a~y~y~rsl~~~~Pf~~a~~nL~~~f~~ 232 (497)
T 1ya0_A 154 CLVHLGDIARYRNQTSQAESYYRHAAQLVPSNGQPYNQLAILASS-KGDHLTTIFYYCRSIAVKFPFPAASTNLQKALSK 232 (497)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTBSHHHHHHHHHHHH-TTCHHHHHHHHHHHHSSSBCCHHHHHHHHHHHHH
T ss_pred HHHHcccHHHHHHHHHHHHHHHHHHHHhCCCCCchHHHHHHHHhc-ccccHHHHHHHHHHHhcCCCChhHHHHHHHHHHH
Confidence 566789999999999999999999999999999999999999777 8999999999999998877778888888877654
No 235
>1zbp_A Hypothetical protein VPA1032; alpha-beta protein, structural genomics, PSI, protein struct initiative; 2.40A {Vibrio parahaemolyticus} SCOP: e.61.1.1
Probab=97.83 E-value=0.00073 Score=39.35 Aligned_cols=60 Identities=20% Similarity=0.284 Sum_probs=55.2
Q ss_pred ccchhcHHHHHHHHHHHHhhCCChhHHHHHHHHHHHhhcChhhHHHHHHHHhccCCCCHH
Q psy12719 4 PGDRERVEQSLKEFRNFVDTHSNVVEACTLFAQVLVDQEDFDGAEEYFNRSIRVDPENAS 63 (116)
Q Consensus 4 ~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~a~~~~~~~~~ 63 (116)
..+.|+.++++......++.+|.+.+....+-.+++-.|+++.|..-++.+.+++|....
T Consensus 7 ll~~g~L~~al~~~~~~VR~~P~da~~R~~LfqLLcv~G~w~RA~~QL~~~a~l~p~~~~ 66 (273)
T 1zbp_A 7 ALSEGQLQQALELLIEAIKASPKDASLRSSFIELLCIDGDFERADEQLMQSIKLFPEYLP 66 (273)
T ss_dssp HTTTTCHHHHHHHHHHHHHTCTTCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCGGGHH
T ss_pred HHhCCCHHHHHHHHHHHHHhCCcCHHHHHHHHHHHHhcCCHHHHHHHHHHHHHhCchhhH
Confidence 356789999999999999999999999999999999999999999999999999987643
No 236
>4gns_B Protein CSD3, chitin biosynthesis protein CHS6; FN3, BRCT, tetratricopeptide repeat, cargo adaptor, transpor; HET: EPE; 2.75A {Saccharomyces cerevisiae}
Probab=97.75 E-value=0.00028 Score=46.70 Aligned_cols=59 Identities=14% Similarity=0.172 Sum_probs=53.1
Q ss_pred HHHHHHHHHHhhcChhhHHHHHHHHhccCCCCHHHHHHHHHHHHHhcCCHHHHHHHHHHH
Q psy12719 30 ACTLFAQVLVDQEDFDGAEEYFNRSIRVDPENASLYVHRAMLMLQARGNVDEAIKLIEKA 89 (116)
Q Consensus 30 ~~~~~~~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~ 89 (116)
.+...+..+...|+++-|+.+.++++...|.....|+.|+.+|.. +|+++.|+-.+..+
T Consensus 339 LL~~Qa~FLl~K~~~elAL~~Ak~AV~~aPseF~tW~~La~vYi~-l~d~e~ALLtLNSc 397 (754)
T 4gns_B 339 LLNIQTNFLLNRGDYELALGVSNTSTELALDSFESWYNLARCHIK-KEEYEKALFAINSM 397 (754)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHHCSSCHHHHHHHHHHHHH-TTCHHHHHHHHHHS
T ss_pred HHHHHHHHHhccCcHHHHHHHHHHHHhcCchhhHHHHHHHHHHHH-hccHHHHHHHHhcC
Confidence 455567778889999999999999999999999999999999998 99999999887765
No 237
>2ff4_A Probable regulatory protein EMBR; winged-helix, tetratricopeptide repeat, beta-sandwich, trans; HET: DNA TPO; 1.90A {Mycobacterium tuberculosis} SCOP: a.4.6.1 a.118.8.3 b.26.1.2 PDB: 2fez_A*
Probab=97.53 E-value=0.0035 Score=38.49 Aligned_cols=83 Identities=11% Similarity=0.040 Sum_probs=66.8
Q ss_pred hcHHHHHHHHHHHHhhCCCh--------h--------------HHHHHHHHHHHhhcChhhHHHHHHHHhccCCCCHHHH
Q psy12719 8 ERVEQSLKEFRNFVDTHSNV--------V--------------EACTLFAQVLVDQEDFDGAEEYFNRSIRVDPENASLY 65 (116)
Q Consensus 8 ~~~~~A~~~~~~~~~~~~~~--------~--------------~~~~~~~~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~ 65 (116)
|+.+.|...+.+++.+..+. . .+...++..+...|++.+++..+..++..+|-+..++
T Consensus 129 ~~~~~a~~~l~~Al~L~rG~~L~~~~~~~w~~~~r~~l~~~~~~a~~~~~~~~l~~g~~~~a~~~l~~~~~~~P~~E~~~ 208 (388)
T 2ff4_A 129 GRFEQASRHLSAALREWRGPVLDDLRDFQFVEPFATALVEDKVLAHTAKAEAEIACGRASAVIAELEALTFEHPYREPLW 208 (388)
T ss_dssp TCHHHHHHHHHHHHTTCCSSTTGGGTTSTTHHHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSTTCHHHH
T ss_pred CCHHHHHHHHHHHHHhcCCCCCCCCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHhCCCCHHHH
Confidence 56777888888888775221 0 1233466677789999999999999999999999999
Q ss_pred HHHHHHHHHhcCCHHHHHHHHHHHHh
Q psy12719 66 VHRAMLMLQARGNVDEAIKLIEKAIS 91 (116)
Q Consensus 66 ~~~~~~~~~~~~~~~~a~~~~~~~~~ 91 (116)
..+-.+++. .|+..+|.+.|+++..
T Consensus 209 ~~lm~al~~-~Gr~~~Al~~y~~~r~ 233 (388)
T 2ff4_A 209 TQLITAYYL-SDRQSDALGAYRRVKT 233 (388)
T ss_dssp HHHHHHHHT-TTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHH-cCCHHHHHHHHHHHHH
Confidence 999999877 8999999999987754
No 238
>1zbp_A Hypothetical protein VPA1032; alpha-beta protein, structural genomics, PSI, protein struct initiative; 2.40A {Vibrio parahaemolyticus} SCOP: e.61.1.1
Probab=97.51 E-value=0.0027 Score=37.02 Aligned_cols=60 Identities=18% Similarity=0.254 Sum_probs=55.6
Q ss_pred HHHhhcChhhHHHHHHHHhccCCCCHHHHHHHHHHHHHhcCCHHHHHHHHHHHHhcCCCcH
Q psy12719 37 VLVDQEDFDGAEEYFNRSIRVDPENASLYVHRAMLMLQARGNVDEAIKLIEKAISIDKSCM 97 (116)
Q Consensus 37 ~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~ 97 (116)
...+.|..++++......++.+|.+......+...++- .|++++|...++.+.+++|...
T Consensus 6 ~ll~~g~L~~al~~~~~~VR~~P~da~~R~~LfqLLcv-~G~w~RA~~QL~~~a~l~p~~~ 65 (273)
T 1zbp_A 6 NALSEGQLQQALELLIEAIKASPKDASLRSSFIELLCI-DGDFERADEQLMQSIKLFPEYL 65 (273)
T ss_dssp HHTTTTCHHHHHHHHHHHHHTCTTCHHHHHHHHHHHHH-HTCHHHHHHHHHHHHHHCGGGH
T ss_pred HHHhCCCHHHHHHHHHHHHHhCCcCHHHHHHHHHHHHh-cCCHHHHHHHHHHHHHhCchhh
Confidence 45688999999999999999999999999999999888 8999999999999999999874
No 239
>1ya0_A SMG-7 transcript variant 2; alpha-helical repeat, tetratricopetide repeat (TPR), 14-3-3, signaling protein; 2.55A {Homo sapiens} SCOP: a.118.8.1
Probab=97.37 E-value=0.0024 Score=40.55 Aligned_cols=65 Identities=14% Similarity=0.082 Sum_probs=56.7
Q ss_pred hcHHHHHHHHHHHHhhCCChhHHHHHHHHHHHhhcChhhHHHHHHHHhccCCCCHHHHHHHHHHH
Q psy12719 8 ERVEQSLKEFRNFVDTHSNVVEACTLFAQVLVDQEDFDGAEEYFNRSIRVDPENASLYVHRAMLM 72 (116)
Q Consensus 8 ~~~~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~ 72 (116)
..+..|..+|.++....|++...+..+|.+....|+.-+|.-+|.+++......+.+..++...+
T Consensus 166 ~~~~~A~~~Y~~A~~~~P~~G~~~nqLavla~~~~~~l~a~y~y~rsl~~~~Pf~~a~~nL~~~f 230 (497)
T 1ya0_A 166 NQTSQAESYYRHAAQLVPSNGQPYNQLAILASSKGDHLTTIFYYCRSIAVKFPFPAASTNLQKAL 230 (497)
T ss_dssp TCHHHHHHHHHHHHHHCTTBSHHHHHHHHHHHHTTCHHHHHHHHHHHHSSSBCCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhCCCCCchHHHHHHHHhcccccHHHHHHHHHHHhcCCCChhHHHHHHHHH
Confidence 45689999999999999999999999999999999999999999999887666777777776663
No 240
>4b4t_R RPN7, 26S proteasome regulatory subunit RPN7; hydrolase, AAA-atpases, protein degradation, ubiquitin-prote pathway; 7.40A {Saccharomyces cerevisiae}
Probab=97.05 E-value=0.0024 Score=39.72 Aligned_cols=64 Identities=16% Similarity=0.095 Sum_probs=45.0
Q ss_pred hHHHHHHHHHHHhhcChhhHHHHHHHHhccCCC---CHHHHHHHHHHHHHhcCCHHHHHHHHHHHHhc
Q psy12719 28 VEACTLFAQVLVDQEDFDGAEEYFNRSIRVDPE---NASLYVHRAMLMLQARGNVDEAIKLIEKAISI 92 (116)
Q Consensus 28 ~~~~~~~~~~~~~~~~~~~A~~~~~~a~~~~~~---~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~ 92 (116)
..++..+|..+...|++++|.+.|.++...... -...+.....+++. .+++..+...+.++-..
T Consensus 131 ~~~~~~la~~~~~~Gd~~~A~~~~~~~~~~~~~~~~kid~~l~~irl~l~-~~d~~~~~~~~~ka~~~ 197 (429)
T 4b4t_R 131 AQAWINLGEYYAQIGDKDNAEKTLGKSLSKAISTGAKIDVMLTIARLGFF-YNDQLYVKEKLEAVNSM 197 (429)
T ss_dssp SSCCHHHHHHHHHHCCCTTHHHHHHHHHHHHTCCCSHHHHHHHHHHHHHH-HTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHhcCChHHHHHHHHHHHHHHHH-hccHHHHHHHHHHHHHh
Confidence 446777888888888888888888777654322 24566666666666 68888888888777544
No 241
>3spa_A Mtrpol, DNA-directed RNA polymerase, mitochondrial; single-subunit DNA-dependent RNA polymerase in mitochondria, transferase; 2.50A {Homo sapiens}
Probab=96.96 E-value=0.025 Score=39.26 Aligned_cols=88 Identities=6% Similarity=-0.089 Sum_probs=62.3
Q ss_pred ccchhcHHHHHHHHHHHHhh----CCChhHHHHHHHHHHHhhcChhhHHHHHHHHhccC-CCCHHHHHHHHHHHHHhcCC
Q psy12719 4 PGDRERVEQSLKEFRNFVDT----HSNVVEACTLFAQVLVDQEDFDGAEEYFNRSIRVD-PENASLYVHRAMLMLQARGN 78 (116)
Q Consensus 4 ~~~~~~~~~A~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~a~~~~-~~~~~~~~~~~~~~~~~~~~ 78 (116)
+.+.|+.++|...|...... ..-+...|..+-..+++.|++++|.+.|++..... ..+...|..+-.++++ .|+
T Consensus 137 lcK~G~leeA~~Lf~eM~~m~~kG~~PdvvTYNtLI~Glck~G~~~eA~~Lf~eM~~~G~~PDvvTYntLI~glcK-~G~ 215 (1134)
T 3spa_A 137 CLLTDQLPLAHHLLVVHHGQRQKRKLLTLDMYNAVMLGWARQGAFKELVYVLFMVKDAGLTPDLLSYAAALQCMGR-QDQ 215 (1134)
T ss_dssp HHHHTCHHHHHHHHHHHHHSHHHHTTCCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHTTCCCCHHHHHHHHHHHHH-HTC
T ss_pred HHhCCCHHHHHHHHHHHHHHhhcCCCCCHhHHHHHHHHHHhCCCHHHHHHHHHHHHHcCCCCcHHHHHHHHHHHHh-CCC
Confidence 45678888898888765422 23346678888888889999999999998887643 2345556666666666 576
Q ss_pred -HHHHHHHHHHHHhc
Q psy12719 79 -VDEAIKLIEKAISI 92 (116)
Q Consensus 79 -~~~a~~~~~~~~~~ 92 (116)
.++|.+.+++..+.
T Consensus 216 ~~e~A~~Ll~EM~~k 230 (1134)
T 3spa_A 216 DAGTIERCLEQMSQE 230 (1134)
T ss_dssp CHHHHHHHHHHHHHH
T ss_pred cHHHHHHHHHHHHHc
Confidence 57788888888765
No 242
>3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A
Probab=96.86 E-value=0.015 Score=38.43 Aligned_cols=43 Identities=9% Similarity=0.073 Sum_probs=32.1
Q ss_pred hhcHHHHHHHHHHHHhhCCChhHHHHHHHHHHHhhcChhhHHHHHHHH
Q psy12719 7 RERVEQSLKEFRNFVDTHSNVVEACTLFAQVLVDQEDFDGAEEYFNRS 54 (116)
Q Consensus 7 ~~~~~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~a 54 (116)
.|++++|.+..+ ..++...|..+|..+...++++.|+.+|.++
T Consensus 665 ~~~~~~A~~~~~-----~~~~~~~W~~la~~al~~~~~~~A~~~y~~~ 707 (814)
T 3mkq_A 665 VGQLTLARDLLT-----DESAEMKWRALGDASLQRFNFKLAIEAFTNA 707 (814)
T ss_dssp HTCHHHHHHHHT-----TCCCHHHHHHHHHHHHHTTCHHHHHHHHHHH
T ss_pred cCCHHHHHHHHH-----hhCcHhHHHHHHHHHHHcCCHHHHHHHHHHc
Confidence 445555554432 2355778999999999999999999999886
No 243
>2ff4_A Probable regulatory protein EMBR; winged-helix, tetratricopeptide repeat, beta-sandwich, trans; HET: DNA TPO; 1.90A {Mycobacterium tuberculosis} SCOP: a.4.6.1 a.118.8.3 b.26.1.2 PDB: 2fez_A*
Probab=96.84 E-value=0.033 Score=34.24 Aligned_cols=77 Identities=12% Similarity=-0.070 Sum_probs=60.3
Q ss_pred HhhcChhhHHHHHHHHhccCCC--------C--------------HHHHHHHHHHHHHhcCCHHHHHHHHHHHHhcCCCc
Q psy12719 39 VDQEDFDGAEEYFNRSIRVDPE--------N--------------ASLYVHRAMLMLQARGNVDEAIKLIEKAISIDKSC 96 (116)
Q Consensus 39 ~~~~~~~~A~~~~~~a~~~~~~--------~--------------~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~ 96 (116)
...|+.+.|...+.+++.+... . ..+...++..++. .|++++++..+..++..+|-+
T Consensus 126 ~~~~~~~~a~~~l~~Al~L~rG~~L~~~~~~~w~~~~r~~l~~~~~~a~~~~~~~~l~-~g~~~~a~~~l~~~~~~~P~~ 204 (388)
T 2ff4_A 126 AAAGRFEQASRHLSAALREWRGPVLDDLRDFQFVEPFATALVEDKVLAHTAKAEAEIA-CGRASAVIAELEALTFEHPYR 204 (388)
T ss_dssp HHTTCHHHHHHHHHHHHTTCCSSTTGGGTTSTTHHHHHHHHHHHHHHHHHHHHHHHHH-TTCHHHHHHHHHHHHHHSTTC
T ss_pred HhCCCHHHHHHHHHHHHHhcCCCCCCCCCchhHHHHHHHHHHHHHHHHHHHHHHHHHH-CCCHHHHHHHHHHHHHhCCCC
Confidence 3467888999999999876421 1 0123345566566 899999999999999999999
Q ss_pred HHHHHHHHHHHHhhcccccC
Q psy12719 97 MFAYETLGTIEVQRTFVVLW 116 (116)
Q Consensus 97 ~~~~~~l~~~~~~~~~~~~a 116 (116)
..++..+..++...|+..+|
T Consensus 205 E~~~~~lm~al~~~Gr~~~A 224 (388)
T 2ff4_A 205 EPLWTQLITAYYLSDRQSDA 224 (388)
T ss_dssp HHHHHHHHHHHHTTTCHHHH
T ss_pred HHHHHHHHHHHHHcCCHHHH
Confidence 99999999999999987654
No 244
>3txn_A 26S proteasome regulatory complex subunit P42B; PCI domain, alpha solenoid, regulatory PART LID, hydrolase, protein binding; 2.50A {Drosophila melanogaster} PDB: 3txm_A
Probab=96.78 E-value=0.025 Score=34.94 Aligned_cols=89 Identities=11% Similarity=0.045 Sum_probs=65.9
Q ss_pred cccchhcHHHHHHHHHHHHhhCCC------hhHHHHHHHHHHHhhcChhhHHHHHHHHhccC---CCC----HHHHHHHH
Q psy12719 3 VPGDRERVEQSLKEFRNFVDTHSN------VVEACTLFAQVLVDQEDFDGAEEYFNRSIRVD---PEN----ASLYVHRA 69 (116)
Q Consensus 3 ~~~~~~~~~~A~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~A~~~~~~a~~~~---~~~----~~~~~~~~ 69 (116)
.|.+.|+|.+|.+.+.+..+.... -.+++..-..+|...+++.++...+.++.... +.+ +.....-|
T Consensus 108 l~~~~~~y~~a~~~i~~l~~~~~~~dd~~~llev~lle~~~~~~~~n~~k~k~~l~~a~~~~~ai~~~p~i~a~i~~~~G 187 (394)
T 3txn_A 108 LYFDTALYTEALALGAQLLRELKKLDDKNLLVEVQLLESKTYHALSNLPKARAALTSARTTANAIYCPPKVQGALDLQSG 187 (394)
T ss_dssp HHHHTTCHHHHHHHHHHHHHHHTTSSCTHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHSCCCHHHHHHHHHHHH
T ss_pred HHHHhhhHHHHHHHHHHHHHHHhccccchhHHHHHHHHHHHHHHhccHHHHHHHHHHHHhhhccCCCCHHHHHHHHHHhh
Confidence 356789999999999988876432 14567777888999999999999998886432 122 22344556
Q ss_pred HHHH-HhcCCHHHHHHHHHHHHhc
Q psy12719 70 MLML-QARGNVDEAIKLIEKAISI 92 (116)
Q Consensus 70 ~~~~-~~~~~~~~a~~~~~~~~~~ 92 (116)
.++. . .++|..|...|-+++..
T Consensus 188 i~~l~~-~rdyk~A~~~F~eaf~~ 210 (394)
T 3txn_A 188 ILHAAD-ERDFKTAFSYFYEAFEG 210 (394)
T ss_dssp HHHHHT-TSCHHHHHHHHHHHHHH
T ss_pred HHHHHh-ccCHHHHHHHHHHHHhc
Confidence 6655 5 89999999999998754
No 245
>4fhn_B Nucleoporin NUP120; protein complex,structural protein,nuclear pore complex,mRNA transport,protein transport, WD repeat; 6.99A {Schizosaccharomyces pombe 972h-}
Probab=96.75 E-value=0.041 Score=38.49 Aligned_cols=95 Identities=12% Similarity=-0.050 Sum_probs=68.1
Q ss_pred HhhCCChhHHHHHHHHHHHhhcChhhHHHHHHHHhccC-CC----------------------CHHHHHHHHHHHHHhcC
Q psy12719 21 VDTHSNVVEACTLFAQVLVDQEDFDGAEEYFNRSIRVD-PE----------------------NASLYVHRAMLMLQARG 77 (116)
Q Consensus 21 ~~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~a~~~~-~~----------------------~~~~~~~~~~~~~~~~~ 77 (116)
....|.++...+.+|.++...|++++|..+|+++...- +. .+..|...... +...+
T Consensus 835 ~~~~~~~~~~~yl~g~~~L~~ge~~~A~~~F~kaa~~~~~~~~l~~~~~~~~~~~~~~~~~~~l~~YY~hv~~L-Fe~~~ 913 (1139)
T 4fhn_B 835 IGWLNSDPIAVYLKALIYLKSKEAVKAVRCFKTTSLVLYSHTSQFAVLREFQEIAEKYHHQNLLSCYYLHLSKK-LFEES 913 (1139)
T ss_dssp HHHSCCCHHHHHHHHHHHHHTTCHHHHHHHHHTCCCSCTTCCCSCSSHHHHHHHHHTTTSCCSSHHHHHHHHHH-HHHTS
T ss_pred hhhccCCcHHHHHHHHHHHhcCCHHHHHHHHHHHhhhhcccchhhhhhcccccccccccccccHHHHHHHHHHH-HHHcC
Confidence 34556666677899999999999999999999874211 00 12344555555 44489
Q ss_pred CHHHHHHHHHHHHhcCC-CcH----HHHHHHHHHHHhhcccccC
Q psy12719 78 NVDEAIKLIEKAISIDK-SCM----FAYETLGTIEVQRTFVVLW 116 (116)
Q Consensus 78 ~~~~a~~~~~~~~~~~~-~~~----~~~~~l~~~~~~~~~~~~a 116 (116)
.++.+++..+.+++..+ ++. ..|..+=......|++++|
T Consensus 914 ~~~~vi~fa~lAi~~~~~~~~~~~~~l~~~iFk~~L~l~~ye~A 957 (1139)
T 4fhn_B 914 AYIDALEFSLLADASKETDDEDLSIAITHETLKTACAAGKFDAA 957 (1139)
T ss_dssp CCHHHHHHHHHHHHHCCSCCHHHHHHHHHHHHHHHHHHCCSGGG
T ss_pred CHHHHHHHHHHHHHhccCCChhhHHHHHHHHHHHHHhhCCHHHH
Confidence 99999999999998754 332 2567777778888988876
No 246
>3mkq_B Coatomer subunit alpha; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae}
Probab=96.71 E-value=0.025 Score=31.00 Aligned_cols=47 Identities=15% Similarity=0.102 Sum_probs=38.7
Q ss_pred cchhcHHHHHHHHHHHHhhCCChhHHHHHHHHHHHhhcChhhHHHHHHHHhc
Q psy12719 5 GDRERVEQSLKEFRNFVDTHSNVVEACTLFAQVLVDQEDFDGAEEYFNRSIR 56 (116)
Q Consensus 5 ~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~a~~ 56 (116)
.+.|+++.|.+..+.. ++...|..+|......|+++-|..+|.++-.
T Consensus 16 L~lg~l~~A~e~a~~l-----~~~~~Wk~Lg~~AL~~gn~~lAe~cy~~~~D 62 (177)
T 3mkq_B 16 LEYGNLDAALDEAKKL-----NDSITWERLIQEALAQGNASLAEMIYQTQHS 62 (177)
T ss_dssp HHTTCHHHHHHHHHHH-----CCHHHHHHHHHHHHHTTCHHHHHHHHHHTTC
T ss_pred HhcCCHHHHHHHHHHh-----CCHHHHHHHHHHHHHcCChHHHHHHHHHhCC
Confidence 3568888888877654 5677899999999999999999999988643
No 247
>3spa_A Mtrpol, DNA-directed RNA polymerase, mitochondrial; single-subunit DNA-dependent RNA polymerase in mitochondria, transferase; 2.50A {Homo sapiens}
Probab=96.61 E-value=0.063 Score=37.44 Aligned_cols=84 Identities=7% Similarity=0.003 Sum_probs=64.3
Q ss_pred HHHHHHHHHHHhhcChhhHHHHHHHHhcc----CCCCHHHHHHHHHHHHHhcCCHHHHHHHHHHHHhcC-CCcHHHHHHH
Q psy12719 29 EACTLFAQVLVDQEDFDGAEEYFNRSIRV----DPENASLYVHRAMLMLQARGNVDEAIKLIEKAISID-KSCMFAYETL 103 (116)
Q Consensus 29 ~~~~~~~~~~~~~~~~~~A~~~~~~a~~~----~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~-~~~~~~~~~l 103 (116)
..+..+-..+++.|+.++|..+|....+. ...+...|..+-..+++ .|+.++|.+.|.+..+.. .-+...|..+
T Consensus 128 ~TynaLIdglcK~G~leeA~~Lf~eM~~m~~kG~~PdvvTYNtLI~Glck-~G~~~eA~~Lf~eM~~~G~~PDvvTYntL 206 (1134)
T 3spa_A 128 QRLLAFFKCCLLTDQLPLAHHLLVVHHGQRQKRKLLTLDMYNAVMLGWAR-QGAFKELVYVLFMVKDAGLTPDLLSYAAA 206 (1134)
T ss_dssp HHHHHHHHHHHHHTCHHHHHHHHHHHHHSHHHHTTCCHHHHHHHHHHHHH-HTCHHHHHHHHHHHHHTTCCCCHHHHHHH
T ss_pred HHHHHHHHHHHhCCCHHHHHHHHHHHHHHhhcCCCCCHhHHHHHHHHHHh-CCCHHHHHHHHHHHHHcCCCCcHHHHHHH
Confidence 35778888999999999999999765432 24456677777777788 899999999999998763 2245567777
Q ss_pred HHHHHhhccc
Q psy12719 104 GTIEVQRTFV 113 (116)
Q Consensus 104 ~~~~~~~~~~ 113 (116)
-.++.+.|+.
T Consensus 207 I~glcK~G~~ 216 (1134)
T 3spa_A 207 LQCMGRQDQD 216 (1134)
T ss_dssp HHHHHHHTCC
T ss_pred HHHHHhCCCc
Confidence 7777777764
No 248
>4b4t_R RPN7, 26S proteasome regulatory subunit RPN7; hydrolase, AAA-atpases, protein degradation, ubiquitin-prote pathway; 7.40A {Saccharomyces cerevisiae}
Probab=96.52 E-value=0.019 Score=35.78 Aligned_cols=90 Identities=11% Similarity=-0.000 Sum_probs=67.0
Q ss_pred ccchhcHHHHHHHHHHHHhhCCCh---hHHHHHHHHHHHhhcChhhHHHHHHHHhccC--CCCH----HHHHHHHHHHHH
Q psy12719 4 PGDRERVEQSLKEFRNFVDTHSNV---VEACTLFAQVLVDQEDFDGAEEYFNRSIRVD--PENA----SLYVHRAMLMLQ 74 (116)
Q Consensus 4 ~~~~~~~~~A~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~A~~~~~~a~~~~--~~~~----~~~~~~~~~~~~ 74 (116)
+.+.|++++|.+.|.++....... .+++.....++...+++..+...+.++-... ..++ ......|..+..
T Consensus 141 ~~~~Gd~~~A~~~~~~~~~~~~~~~~kid~~l~~irl~l~~~d~~~~~~~~~ka~~~~~~~~d~~~~~~lk~~~gl~~l~ 220 (429)
T 4b4t_R 141 YAQIGDKDNAEKTLGKSLSKAISTGAKIDVMLTIARLGFFYNDQLYVKEKLEAVNSMIEKGGDWERRNRYKTYYGIHCLA 220 (429)
T ss_dssp HHHHCCCTTHHHHHHHHHHHHTCCCSHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHTTCCCTHHHHHHHHHHHHGGGG
T ss_pred HHHcCCHHHHHHHHHHHHHhcCChHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHhhhcCCCHHHHHHHHHHHHHHHHH
Confidence 457799999999999988765433 5678888889999999999999999985432 1222 233444555555
Q ss_pred hcCCHHHHHHHHHHHHhcCC
Q psy12719 75 ARGNVDEAIKLIEKAISIDK 94 (116)
Q Consensus 75 ~~~~~~~a~~~~~~~~~~~~ 94 (116)
.++|..|...|..++....
T Consensus 221 -~r~f~~Aa~~f~e~~~t~~ 239 (429)
T 4b4t_R 221 -VRNFKEAAKLLVDSLATFT 239 (429)
T ss_dssp -TSCHHHHHHHHHHHHHHSC
T ss_pred -hChHHHHHHHHHHHhccCC
Confidence 7999999999988876543
No 249
>3txn_A 26S proteasome regulatory complex subunit P42B; PCI domain, alpha solenoid, regulatory PART LID, hydrolase, protein binding; 2.50A {Drosophila melanogaster} PDB: 3txm_A
Probab=96.33 E-value=0.075 Score=32.90 Aligned_cols=83 Identities=8% Similarity=-0.053 Sum_probs=58.2
Q ss_pred HHHHHHHhhcChhhHHHHHHHHhccCCC--C----HHHHHHHHHHHHHhcCCHHHHHHHHHHHHhcC---CCc----HHH
Q psy12719 33 LFAQVLVDQEDFDGAEEYFNRSIRVDPE--N----ASLYVHRAMLMLQARGNVDEAIKLIEKAISID---KSC----MFA 99 (116)
Q Consensus 33 ~~~~~~~~~~~~~~A~~~~~~a~~~~~~--~----~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~---~~~----~~~ 99 (116)
.+|.+|+..|+|.+|...+.+..+.-.. + ..++..-..++.. .+++.++...+.++.... +.+ ...
T Consensus 104 kL~~l~~~~~~y~~a~~~i~~l~~~~~~~dd~~~llev~lle~~~~~~-~~n~~k~k~~l~~a~~~~~ai~~~p~i~a~i 182 (394)
T 3txn_A 104 RLIALYFDTALYTEALALGAQLLRELKKLDDKNLLVEVQLLESKTYHA-LSNLPKARAALTSARTTANAIYCPPKVQGAL 182 (394)
T ss_dssp HHHHHHHHTTCHHHHHHHHHHHHHHHTTSSCTHHHHHHHHHHHHHHHH-TTCHHHHHHHHHHHHHHHHHSCCCHHHHHHH
T ss_pred HHHHHHHHhhhHHHHHHHHHHHHHHHhccccchhHHHHHHHHHHHHHH-hccHHHHHHHHHHHHhhhccCCCCHHHHHHH
Confidence 7899999999999999998887653221 1 3456667777777 899999999998886542 112 334
Q ss_pred HHHHHHHHH-hhcccccC
Q psy12719 100 YETLGTIEV-QRTFVVLW 116 (116)
Q Consensus 100 ~~~l~~~~~-~~~~~~~a 116 (116)
...-|..+. ..++|..|
T Consensus 183 ~~~~Gi~~l~~~rdyk~A 200 (394)
T 3txn_A 183 DLQSGILHAADERDFKTA 200 (394)
T ss_dssp HHHHHHHHHHTTSCHHHH
T ss_pred HHHhhHHHHHhccCHHHH
Confidence 445566666 66766543
No 250
>3kae_A CDC27, possible protein of nuclear scaffold; tetratricopeptide repeat protein, protein binding; 2.30A {Encephalitozoon cuniculi}
Probab=96.10 E-value=0.068 Score=29.45 Aligned_cols=86 Identities=15% Similarity=0.074 Sum_probs=62.4
Q ss_pred CChhHHHHHHHHHHHhhcChhhHHHHHHHHhccCCCCHHHHHHHHHHHHHhcCCHHHHHHHHHHHHhc------------
Q psy12719 25 SNVVEACTLFAQVLVDQEDFDGAEEYFNRSIRVDPENASLYVHRAMLMLQARGNVDEAIKLIEKAISI------------ 92 (116)
Q Consensus 25 ~~~~~~~~~~~~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~------------ 92 (116)
|..++..+.++.+++-.|++..+.-.+. .-+.....+..+.|+.. .+++..|+..++..+.-
T Consensus 30 ~~~~eY~lL~~I~LyyngEY~R~Lf~L~-----~lNT~Ts~YYk~LCy~k-lKdYkkA~~~le~il~~kvd~d~~~d~~~ 103 (242)
T 3kae_A 30 PCKPEYRMLMSIVLYLNGEYTRALFHLH-----KLNTCTSKYYESLCYKK-KKDYKKAIKSLESILEGKVERDPDVDARI 103 (242)
T ss_dssp ----CTHHHHHHHHHHTTCHHHHHHHHH-----TCCBHHHHHHHHHHHHH-TTCHHHHHHHHHHHHTTCSBCCCCCCHHH
T ss_pred cCChHHHhhhhhhhhhcchHhHHHHHHH-----hcchHHHHHHHHHHHHH-HHHHHHHHHHHHHHHhcccccCccccccc
Confidence 4555667788999999999998887764 23456667777888777 89999999999999932
Q ss_pred -----CCCcH-HHHHHHHHHHHhhcccccC
Q psy12719 93 -----DKSCM-FAYETLGTIEVQRTFVVLW 116 (116)
Q Consensus 93 -----~~~~~-~~~~~l~~~~~~~~~~~~a 116 (116)
+|.+. -.+..+|.++.+.|+.++|
T Consensus 104 ~~ffvd~~DkEfFy~l~a~lltq~g~r~Ea 133 (242)
T 3kae_A 104 QEMFVDPGDEEFFESLLGDLCTLSGYREEG 133 (242)
T ss_dssp HTTSCCTTCHHHHHHHHHHHHHHTTCHHHH
T ss_pred ceeeeccchHHHHHHHHHHHHHHhcCHHHh
Confidence 33343 3566788888888887664
No 251
>4b4t_P 26S proteasome regulatory subunit RPN5; hydrolase, AAA-atpases, protein degradation, ubiquitin-prote pathway; 7.40A {Saccharomyces cerevisiae}
Probab=95.90 E-value=0.16 Score=31.94 Aligned_cols=88 Identities=7% Similarity=0.128 Sum_probs=64.9
Q ss_pred ccchhcHHHHHHHHHHHHhhCCCh------hHHHHHHHHHHHhhcChhhHHHHHHHHhc---cCCCCH----HHHHHHHH
Q psy12719 4 PGDRERVEQSLKEFRNFVDTHSNV------VEACTLFAQVLVDQEDFDGAEEYFNRSIR---VDPENA----SLYVHRAM 70 (116)
Q Consensus 4 ~~~~~~~~~A~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~A~~~~~~a~~---~~~~~~----~~~~~~~~ 70 (116)
+...|++.+|.+.+.......-.. .+++.....++...+++..|...++++.. ..+..+ ..+...|.
T Consensus 147 ~e~~g~~~eA~~iL~~l~~Et~~~~~~~~kve~~l~q~rl~l~~~d~~~a~~~~~ki~~~~~~~~~~~~lk~~~~~~~~~ 226 (445)
T 4b4t_P 147 KKEEGKIDEAADILCELQVETYGSMEMSEKIQFILEQMELSILKGDYSQATVLSRKILKKTFKNPKYESLKLEYYNLLVK 226 (445)
T ss_dssp HHHHTCHHHHHHHHHHHHHHHCSSSCHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHSSCCHHHHHHHHHHHHH
T ss_pred HHHccCHHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHhhcccCCcHHHHHHHHHHHHH
Confidence 457799999999998876432111 45777888899999999999999988632 223332 34556677
Q ss_pred HHHHhcCCHHHHHHHHHHHHhc
Q psy12719 71 LMLQARGNVDEAIKLIEKAISI 92 (116)
Q Consensus 71 ~~~~~~~~~~~a~~~~~~~~~~ 92 (116)
.+.. .++|.+|...|..++..
T Consensus 227 ~~~~-e~~y~~a~~~y~e~~~~ 247 (445)
T 4b4t_P 227 ISLH-KREYLEVAQYLQEIYQT 247 (445)
T ss_dssp HHHH-HCCHHHHHHHHHHHHHH
T ss_pred HHHH-hhhHHHHHHHHHHHHhc
Confidence 7655 89999999999988764
No 252
>3mkq_B Coatomer subunit alpha; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae}
Probab=95.59 E-value=0.12 Score=28.34 Aligned_cols=56 Identities=14% Similarity=0.079 Sum_probs=45.5
Q ss_pred hhHHHHHHHHHHHhhcChhhHHHHHHHHhccCCCCHHHHHHHHHHHHHhcCCHHHHHHHHHHHHh
Q psy12719 27 VVEACTLFAQVLVDQEDFDGAEEYFNRSIRVDPENASLYVHRAMLMLQARGNVDEAIKLIEKAIS 91 (116)
Q Consensus 27 ~~~~~~~~~~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~ 91 (116)
+++..+.++ ...|+++.|.+..+.. ++...|..+|...+. .|+++-|+++|.++-.
T Consensus 7 D~~~rF~LA---L~lg~l~~A~e~a~~l-----~~~~~Wk~Lg~~AL~-~gn~~lAe~cy~~~~D 62 (177)
T 3mkq_B 7 DPHIRFDLA---LEYGNLDAALDEAKKL-----NDSITWERLIQEALA-QGNASLAEMIYQTQHS 62 (177)
T ss_dssp CHHHHHHHH---HHTTCHHHHHHHHHHH-----CCHHHHHHHHHHHHH-TTCHHHHHHHHHHTTC
T ss_pred ChHHHHHHH---HhcCCHHHHHHHHHHh-----CCHHHHHHHHHHHHH-cCChHHHHHHHHHhCC
Confidence 455556655 4789999999988765 678899999999888 8999999999987643
No 253
>4b4t_S RPN3, 26S proteasome regulatory subunit RPN3; hydrolase, AAA-atpases, protein degradation, ubiquitin-prote pathway; 7.40A {Saccharomyces cerevisiae}
Probab=95.45 E-value=0.28 Score=31.61 Aligned_cols=68 Identities=12% Similarity=0.112 Sum_probs=53.9
Q ss_pred hHHHHHHHHHHHhhcChhhHHHHHHHHhccCC--CC---HHHHHHHHHHHHHhcCCHHHHHHHHHHHHhcCCCc
Q psy12719 28 VEACTLFAQVLVDQEDFDGAEEYFNRSIRVDP--EN---ASLYVHRAMLMLQARGNVDEAIKLIEKAISIDKSC 96 (116)
Q Consensus 28 ~~~~~~~~~~~~~~~~~~~A~~~~~~a~~~~~--~~---~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~ 96 (116)
...+..+-..|...+.++.|.....++.-... .+ ...++.+|.++.. .++|.+|.+.+..|+...|.+
T Consensus 231 a~l~nllLRnYL~~~~y~qA~~lvsk~~fP~~~~sn~q~~rY~YY~GRI~a~-q~~Y~eA~~~L~~A~rkap~~ 303 (523)
T 4b4t_S 231 AMLINLILRDFLNNGEVDSASDFISKLEYPHTDVSSSLEARYFFYLSKINAI-QLDYSTANEYIIAAIRKAPHN 303 (523)
T ss_dssp HHHHHHHHHHHHHSSCSTTHHHHHHHHCSCTTTSCHHHHHHHHHHHHHHHHH-TTCHHHHHHHHHHHTSSCSCS
T ss_pred HHHHHHHHHHHHccCcHHHHHHHHhcCcCCcccCCHHHHHHHHHHHHHHHHH-hccHHHHHHHHHHHHHhCCcc
Confidence 44677788889999999999999999852211 11 4567788999777 899999999999999987754
No 254
>3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A
Probab=95.07 E-value=0.11 Score=34.50 Aligned_cols=47 Identities=19% Similarity=0.116 Sum_probs=36.9
Q ss_pred HHhhcChhhHHHHHHHHhccCCCCHHHHHHHHHHHHHhcCCHHHHHHHHHHHH
Q psy12719 38 LVDQEDFDGAEEYFNRSIRVDPENASLYVHRAMLMLQARGNVDEAIKLIEKAI 90 (116)
Q Consensus 38 ~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~ 90 (116)
....|+++.|.+..+ ..++...|..+|..+.+ .++++.|+++|.++-
T Consensus 662 ~l~~~~~~~A~~~~~-----~~~~~~~W~~la~~al~-~~~~~~A~~~y~~~~ 708 (814)
T 3mkq_A 662 ALKVGQLTLARDLLT-----DESAEMKWRALGDASLQ-RFNFKLAIEAFTNAH 708 (814)
T ss_dssp HHHHTCHHHHHHHHT-----TCCCHHHHHHHHHHHHH-TTCHHHHHHHHHHHT
T ss_pred hhhcCCHHHHHHHHH-----hhCcHhHHHHHHHHHHH-cCCHHHHHHHHHHcc
Confidence 345677777776653 23577899999999888 899999999998863
No 255
>1qsa_A Protein (soluble lytic transglycosylase SLT70); alpha-superhelix, transferase; HET: GOL; 1.65A {Escherichia coli} SCOP: a.118.5.1 d.2.1.6 PDB: 1qte_A* 1sly_A*
Probab=94.12 E-value=0.7 Score=30.48 Aligned_cols=79 Identities=15% Similarity=0.161 Sum_probs=49.2
Q ss_pred HHHHHHHHHHHhhCCChhHHHHHHHHHHHhhcChhhHHHHHHHHhccCCCCHHHHHHHHHHHHHhcCCHHHHHHHHHHHH
Q psy12719 11 EQSLKEFRNFVDTHSNVVEACTLFAQVLVDQEDFDGAEEYFNRSIRVDPENASLYVHRAMLMLQARGNVDEAIKLIEKAI 90 (116)
Q Consensus 11 ~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~ 90 (116)
.++...+.+.....+++.. .-.++....+.|+++.|..++.++-...+......|-+|..+.. .|+.++|...|.++.
T Consensus 269 ~~~~~~~~~~~~~~~~~~~-~e~~~r~Alr~~d~~~a~~~~~~l~~~~~~~~r~~YW~~ra~~~-~g~~~~a~~~~~~~a 346 (618)
T 1qsa_A 269 DEQAKWRDDAIMRSQSTSL-IERRVRMALGTGDRRGLNTWLARLPMEAKEKDEWRYWQADLLLE-RGREAEAKEILHQLM 346 (618)
T ss_dssp HHHHHHHHHHHHTCCCHHH-HHHHHHHHHHHTCHHHHHHHHHHSCTTGGGSHHHHHHHHHHHHH-TTCHHHHHHHHHHHH
T ss_pred hHHHHHHHhccccCCChHH-HHHHHHHHHHCCCHHHHHHHHHHccccccccHhHHHHHHHHHHH-cCCHHHHHHHHHHHh
Confidence 3455555554443333322 22333344567888888888877655444556667777777555 788888888888876
Q ss_pred h
Q psy12719 91 S 91 (116)
Q Consensus 91 ~ 91 (116)
.
T Consensus 347 ~ 347 (618)
T 1qsa_A 347 Q 347 (618)
T ss_dssp T
T ss_pred c
Confidence 5
No 256
>4b4t_P 26S proteasome regulatory subunit RPN5; hydrolase, AAA-atpases, protein degradation, ubiquitin-prote pathway; 7.40A {Saccharomyces cerevisiae}
Probab=93.20 E-value=0.96 Score=28.49 Aligned_cols=86 Identities=12% Similarity=0.136 Sum_probs=59.7
Q ss_pred HHHHHHHHHHHhhcChhhHHHHHHHHhcc----CCCC--HHHHHHHHHHHHHhcCCHHHHHHHHHHHHh---cCCCc---
Q psy12719 29 EACTLFAQVLVDQEDFDGAEEYFNRSIRV----DPEN--ASLYVHRAMLMLQARGNVDEAIKLIEKAIS---IDKSC--- 96 (116)
Q Consensus 29 ~~~~~~~~~~~~~~~~~~A~~~~~~a~~~----~~~~--~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~---~~~~~--- 96 (116)
.....++.++...|++.+|...+.....- .+.. ...+.....+++. .+++.+|...+.++.. ..+..
T Consensus 138 rl~~~La~i~e~~g~~~eA~~iL~~l~~Et~~~~~~~~kve~~l~q~rl~l~-~~d~~~a~~~~~ki~~~~~~~~~~~~l 216 (445)
T 4b4t_P 138 RVTKDLVEIKKEEGKIDEAADILCELQVETYGSMEMSEKIQFILEQMELSIL-KGDYSQATVLSRKILKKTFKNPKYESL 216 (445)
T ss_dssp HHHHHHHHHHHHHTCHHHHHHHHHHHHHHHCSSSCHHHHHHHHHHHHHHHHH-HTCHHHHHHHHHHHHHHHHHSSCCHHH
T ss_pred HHHHHHHHHHHHccCHHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHH-CCCHHHHHHHHHHHHHhhcccCCcHHH
Confidence 35578899999999999999999887532 1111 4567777777777 8999999999988742 12222
Q ss_pred -HHHHHHHHHHHHhhccccc
Q psy12719 97 -MFAYETLGTIEVQRTFVVL 115 (116)
Q Consensus 97 -~~~~~~l~~~~~~~~~~~~ 115 (116)
...+...|.++...++|.+
T Consensus 217 k~~~~~~~~~~~~~e~~y~~ 236 (445)
T 4b4t_P 217 KLEYYNLLVKISLHKREYLE 236 (445)
T ss_dssp HHHHHHHHHHHHHHHCCHHH
T ss_pred HHHHHHHHHHHHHHhhhHHH
Confidence 2345566666666666543
No 257
>3t5x_A PCI domain-containing protein 2; PCI, mRNA nuclear export, transcription; 2.12A {Homo sapiens}
Probab=93.18 E-value=0.44 Score=26.69 Aligned_cols=32 Identities=19% Similarity=0.172 Sum_probs=19.8
Q ss_pred HHHHHHHHHHhhcChhhHHHHHHHHhccCCCC
Q psy12719 30 ACTLFAQVLVDQEDFDGAEEYFNRSIRVDPEN 61 (116)
Q Consensus 30 ~~~~~~~~~~~~~~~~~A~~~~~~a~~~~~~~ 61 (116)
..+.+|.+++..++|.+|.+.+..|++..|..
T Consensus 16 Y~YYlGr~~~~~~~y~~A~~~L~~A~~~~~~~ 47 (203)
T 3t5x_A 16 YKYYVGRKAMFDSDFKQAEEYLSFAFEHCHRS 47 (203)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHHSCTT
T ss_pred HHHHHHHHHHHHhCHHHHHHHHHHHHHHCCHh
Confidence 44556666666666666666666666665544
No 258
>3t5v_B Nuclear mRNA export protein THP1; PCI, mRNA nuclear export, mRNA, nuclear, transcription; 2.90A {Saccharomyces cerevisiae}
Probab=93.17 E-value=0.99 Score=28.65 Aligned_cols=89 Identities=7% Similarity=-0.024 Sum_probs=62.2
Q ss_pred hhcHHHHHHHHHHHHhhCCCh-------h---H------HHHHHHHHHHhhcChhhHHHHHHHHhccC--------CCC-
Q psy12719 7 RERVEQSLKEFRNFVDTHSNV-------V---E------ACTLFAQVLVDQEDFDGAEEYFNRSIRVD--------PEN- 61 (116)
Q Consensus 7 ~~~~~~A~~~~~~~~~~~~~~-------~---~------~~~~~~~~~~~~~~~~~A~~~~~~a~~~~--------~~~- 61 (116)
....+++...+.++...+-.+ . . ....+-.+|++.++..-+...++..-... |.+
T Consensus 139 ~~~le~~a~~i~k~F~~cl~Dr~~~~~~s~p~kk~~~l~l~n~L~kiYFkl~~~~lckni~k~i~~~~~~p~~~~~p~~q 218 (455)
T 3t5v_B 139 HQFLSHISSILSRLFNSIKPPRGNASSTNIPGKQRILLYLVNKLNNIYFRIESPQLCSNIFKNFQPKSMLAHFNEYQLDQ 218 (455)
T ss_dssp THHHHHHHHHHHHHHHHCCCC----CCSSCCHHHHHHHHHHHHHHHHHHHSSCCTTHHHHHHTHHHHCCCSCGGGSCHHH
T ss_pred hhHHHHHHHHHHHHHHHhcccCCCcccccccccchhHHHHHHHHHHHHHHcCCHHHHHHHHHHhccCCCCcChhhCCccc
Confidence 345677777777777664211 0 1 23345578889999999988886543322 211
Q ss_pred -HHHHHHHHHHHHHhcCCHHHHHHHHHHHHhc-CCCc
Q psy12719 62 -ASLYVHRAMLMLQARGNVDEAIKLIEKAISI-DKSC 96 (116)
Q Consensus 62 -~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~-~~~~ 96 (116)
....|.+|..++. .++|.+|.+.+..|+.. .|..
T Consensus 219 ~v~Y~YYlGr~~~~-~~~y~~A~~~L~~A~~~lcp~~ 254 (455)
T 3t5v_B 219 QIEYRYLLGRYYLL-NSQVHNAFVQFNEAFQSLLNLP 254 (455)
T ss_dssp HHHHHHHHHHHHHH-TTCHHHHHHHHHHHHHHHHHCC
T ss_pred eEeeeHHHHHHHHH-HccHHHHHHHHHHHHHhcCCcc
Confidence 4568889999887 89999999999999998 6643
No 259
>3kae_A CDC27, possible protein of nuclear scaffold; tetratricopeptide repeat protein, protein binding; 2.30A {Encephalitozoon cuniculi}
Probab=92.85 E-value=0.66 Score=25.70 Aligned_cols=86 Identities=13% Similarity=0.091 Sum_probs=59.3
Q ss_pred hhcHHHHHHHHHHHHhhCCChhHHHHHHHHHHHhhcChhhHHHHHHHHhc--c--C-------------CCCHHH-HHHH
Q psy12719 7 RERVEQSLKEFRNFVDTHSNVVEACTLFAQVLVDQEDFDGAEEYFNRSIR--V--D-------------PENASL-YVHR 68 (116)
Q Consensus 7 ~~~~~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~a~~--~--~-------------~~~~~~-~~~~ 68 (116)
.|+|.+++-.+.. -+.....+.-+.++...+++..|+..+...+. . + |.+... +..+
T Consensus 46 ngEY~R~Lf~L~~-----lNT~Ts~YYk~LCy~klKdYkkA~~~le~il~~kvd~d~~~d~~~~~ffvd~~DkEfFy~l~ 120 (242)
T 3kae_A 46 NGEYTRALFHLHK-----LNTCTSKYYESLCYKKKKDYKKAIKSLESILEGKVERDPDVDARIQEMFVDPGDEEFFESLL 120 (242)
T ss_dssp TTCHHHHHHHHHT-----CCBHHHHHHHHHHHHHTTCHHHHHHHHHHHHTTCSBCCCCCCHHHHTTSCCTTCHHHHHHHH
T ss_pred cchHhHHHHHHHh-----cchHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccCcccccccceeeeccchHHHHHHHH
Confidence 3555555444322 23344556677888999999999999999982 2 2 333344 4556
Q ss_pred HHHHHHhcCCHHHHHHHHHHHHhcCCCcHH
Q psy12719 69 AMLMLQARGNVDEAIKLIEKAISIDKSCMF 98 (116)
Q Consensus 69 ~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~ 98 (116)
|.++-+ .|+.++|+..+.......|-.+.
T Consensus 121 a~lltq-~g~r~EaI~y~~~Sf~~~~lf~~ 149 (242)
T 3kae_A 121 GDLCTL-SGYREEGIGHYVRSFGKSFLFSP 149 (242)
T ss_dssp HHHHHH-TTCHHHHHHHHHHHHHHCCCHHH
T ss_pred HHHHHH-hcCHHHhhhHhhhhcCCccccch
Confidence 777555 89999999999999988776543
No 260
>1qsa_A Protein (soluble lytic transglycosylase SLT70); alpha-superhelix, transferase; HET: GOL; 1.65A {Escherichia coli} SCOP: a.118.5.1 d.2.1.6 PDB: 1qte_A* 1sly_A*
Probab=92.76 E-value=1.4 Score=29.16 Aligned_cols=106 Identities=9% Similarity=-0.023 Sum_probs=58.3
Q ss_pred hcHHHHHHHHHHHHhhCCCh-hH---HHHHHHHHHHhhcChhhHHHHHHHHhccCCCCHHHHHHHHHHHHHhcCCHHHHH
Q psy12719 8 ERVEQSLKEFRNFVDTHSNV-VE---ACTLFAQVLVDQEDFDGAEEYFNRSIRVDPENASLYVHRAMLMLQARGNVDEAI 83 (116)
Q Consensus 8 ~~~~~A~~~~~~~~~~~~~~-~~---~~~~~~~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~a~ 83 (116)
.+.+.|...+.......+-+ .. .+..++.-....+...++..++.+.....++....-...+. .++ .|++..+.
T Consensus 228 ~d~~~A~~~~~~~~~~~~~~~~~~~~~~~~ia~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~r~-Alr-~~d~~~a~ 305 (618)
T 1qsa_A 228 QDAENARLMIPSLAQAQQLNEDQIQELRDIVAWRLMGNDVTDEQAKWRDDAIMRSQSTSLIERRVRM-ALG-TGDRRGLN 305 (618)
T ss_dssp HCHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHTSCSTTCCHHHHHHHHHHHHTCCCHHHHHHHHHH-HHH-HTCHHHHH
T ss_pred cCHHHHHHHHHhhhhccCCCHHHHHHHHHHHHHHHHHcCCChHHHHHHHhccccCCChHHHHHHHHH-HHH-CCCHHHHH
Confidence 35677777777665433222 11 22233333334443456666666655444333333333333 355 58888888
Q ss_pred HHHHHHHhcCCCcHHHHHHHHHHHHhhccccc
Q psy12719 84 KLIEKAISIDKSCMFAYETLGTIEVQRTFVVL 115 (116)
Q Consensus 84 ~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~ 115 (116)
..+...-...+..+...+-+|.++...|+.++
T Consensus 306 ~~~~~l~~~~~~~~r~~YW~~ra~~~~g~~~~ 337 (618)
T 1qsa_A 306 TWLARLPMEAKEKDEWRYWQADLLLERGREAE 337 (618)
T ss_dssp HHHHHSCTTGGGSHHHHHHHHHHHHHTTCHHH
T ss_pred HHHHHccccccccHhHHHHHHHHHHHcCCHHH
Confidence 88866544333456667777887777776554
No 261
>4b4t_S RPN3, 26S proteasome regulatory subunit RPN3; hydrolase, AAA-atpases, protein degradation, ubiquitin-prote pathway; 7.40A {Saccharomyces cerevisiae}
Probab=92.44 E-value=0.19 Score=32.34 Aligned_cols=55 Identities=18% Similarity=0.232 Sum_probs=43.3
Q ss_pred cchhcHHHHHHHHHHHHhhCCCh-------hHHHHHHHHHHHhhcChhhHHHHHHHHhccCCCC
Q psy12719 5 GDRERVEQSLKEFRNFVDTHSNV-------VEACTLFAQVLVDQEDFDGAEEYFNRSIRVDPEN 61 (116)
Q Consensus 5 ~~~~~~~~A~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~A~~~~~~a~~~~~~~ 61 (116)
...+.++.|.....++. .|.+ ...++.+|.++.-+++|.+|.+++..|++..|.+
T Consensus 242 L~~~~y~qA~~lvsk~~--fP~~~~sn~q~~rY~YY~GRI~a~q~~Y~eA~~~L~~A~rkap~~ 303 (523)
T 4b4t_S 242 LNNGEVDSASDFISKLE--YPHTDVSSSLEARYFFYLSKINAIQLDYSTANEYIIAAIRKAPHN 303 (523)
T ss_dssp HHSSCSTTHHHHHHHHC--SCTTTSCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHTSSCSCS
T ss_pred HccCcHHHHHHHHhcCc--CCcccCCHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHhCCcc
Confidence 34567788888888874 4432 3466778999999999999999999999988754
No 262
>4fhn_B Nucleoporin NUP120; protein complex,structural protein,nuclear pore complex,mRNA transport,protein transport, WD repeat; 6.99A {Schizosaccharomyces pombe 972h-}
Probab=92.27 E-value=1.1 Score=31.73 Aligned_cols=108 Identities=7% Similarity=-0.048 Sum_probs=70.5
Q ss_pred cccchhcHHHHHHHHHHHHhhC-C----------------------ChhHHHHHHHHHHHhhcChhhHHHHHHHHhccCC
Q psy12719 3 VPGDRERVEQSLKEFRNFVDTH-S----------------------NVVEACTLFAQVLVDQEDFDGAEEYFNRSIRVDP 59 (116)
Q Consensus 3 ~~~~~~~~~~A~~~~~~~~~~~-~----------------------~~~~~~~~~~~~~~~~~~~~~A~~~~~~a~~~~~ 59 (116)
++...|++++|.++|.++.... + ..+..+.....++...+.++.+++..+.|+...+
T Consensus 851 ~~L~~ge~~~A~~~F~kaa~~~~~~~~l~~~~~~~~~~~~~~~~~~~l~~YY~hv~~LFe~~~~~~~vi~fa~lAi~~~~ 930 (1139)
T 4fhn_B 851 IYLKSKEAVKAVRCFKTTSLVLYSHTSQFAVLREFQEIAEKYHHQNLLSCYYLHLSKKLFEESAYIDALEFSLLADASKE 930 (1139)
T ss_dssp HHHHTTCHHHHHHHHHTCCCSCTTCCCSCSSHHHHHHHHHTTTSCCSSHHHHHHHHHHHHHTSCCHHHHHHHHHHHHHCC
T ss_pred HHHhcCCHHHHHHHHHHHhhhhcccchhhhhhcccccccccccccccHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhcc
Confidence 3456789999999998874211 0 0123455667778889999999999999998654
Q ss_pred C-CH----HHHHHHHHHHHHhcCCHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHhhcc
Q psy12719 60 E-NA----SLYVHRAMLMLQARGNVDEAIKLIEKAISIDKSCMFAYETLGTIEVQRTF 112 (116)
Q Consensus 60 ~-~~----~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~ 112 (116)
. +. ..|.++-..++. .++|++|...+...-... ....++..+-...+..|.
T Consensus 931 ~~~~~~~~~l~~~iFk~~L~-l~~ye~Ay~aL~~~pd~~-~r~~cLr~LV~~lce~~~ 986 (1139)
T 4fhn_B 931 TDDEDLSIAITHETLKTACA-AGKFDAAHVALMVLSTTP-LKKSCLLDFVNQLTKQGK 986 (1139)
T ss_dssp SCCHHHHHHHHHHHHHHHHH-HCCSGGGGHHHHHHHHSS-SCHHHHHHHHHHHHHHCC
T ss_pred CCChhhHHHHHHHHHHHHHh-hCCHHHHHHHHHhCCCHH-HHHHHHHHHHHHHHhCCC
Confidence 3 32 256777777777 899999988885443222 223445555444444443
No 263
>1wy6_A Hypothetical protein ST1625; helical repeat protein, structural genomics, unknown function; 2.20A {Sulfolobus tokodaii} SCOP: a.118.20.1
Probab=92.09 E-value=0.74 Score=24.52 Aligned_cols=57 Identities=25% Similarity=0.214 Sum_probs=46.1
Q ss_pred HHHhhcChhhHHHHHHHHhccCCCCHHHHHHHHHHHHHhcCCHHHHHHHHHHHHhcCC
Q psy12719 37 VLVDQEDFDGAEEYFNRSIRVDPENASLYVHRAMLMLQARGNVDEAIKLIEKAISIDK 94 (116)
Q Consensus 37 ~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~ 94 (116)
....+|+-+.-.+.+...+...+-++..++.+|.+|-+ .|+..++.+.+.+|.+..-
T Consensus 100 ~lv~~~KkDqLdki~~~~l~n~~~~~~~l~kia~Ay~K-lg~~r~a~eLl~~AC~kG~ 156 (172)
T 1wy6_A 100 ILVIQGKRDKLEEIGREILKNNEVSASILVAIANALRR-VGDERDATTLLIEACKKGE 156 (172)
T ss_dssp HHHHTTCHHHHHHHHHHHC--CCSCHHHHHHHHHHHHH-TTCHHHHHHHHHHHHHTTC
T ss_pred HHHHhccHhHHHHHHHHHhccCCCChHHHHHHHHHHHH-hcchhhHHHHHHHHHHhhh
Confidence 44578888888888888777788889999999999766 8999999999999987643
No 264
>3ax2_A Mitochondrial import receptor subunit TOM20 homol; protein-protein complex, membrane protein-transport protein; 1.90A {Rattus norvegicus} PDB: 2v1s_A 3awr_A 2v1t_A 3ax5_A 3ax3_A
Probab=91.18 E-value=0.6 Score=21.64 Aligned_cols=31 Identities=16% Similarity=0.274 Sum_probs=20.4
Q ss_pred HHHHHHHhhcChhhHHHHHHHHhccCCCCHH
Q psy12719 33 LFAQVLVDQEDFDGAEEYFNRSIRVDPENAS 63 (116)
Q Consensus 33 ~~~~~~~~~~~~~~A~~~~~~a~~~~~~~~~ 63 (116)
.+|..+...|++++|..+|-+|+...|+-..
T Consensus 22 ~~GE~L~~~g~~~~~~~hf~nAl~Vc~qP~~ 52 (73)
T 3ax2_A 22 QLGEELLAQGDYEKGVDHLTNAIAVCGQPQQ 52 (73)
T ss_dssp HHHHHHHHTTCHHHHHHHHHHHHHTCSSCHH
T ss_pred HHHHHHHHCCCHHHHHHHHHHHHHHcCCHHH
Confidence 4566666667777777777777766666544
No 265
>3t5x_A PCI domain-containing protein 2; PCI, mRNA nuclear export, transcription; 2.12A {Homo sapiens}
Probab=90.51 E-value=1.4 Score=24.67 Aligned_cols=34 Identities=6% Similarity=-0.053 Sum_probs=29.6
Q ss_pred HHHHHHHHHHHHHhcCCHHHHHHHHHHHHhcCCCc
Q psy12719 62 ASLYVHRAMLMLQARGNVDEAIKLIEKAISIDKSC 96 (116)
Q Consensus 62 ~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~ 96 (116)
....+.+|.+++. .+++.+|.+.+..|+...|..
T Consensus 14 v~Y~YYlGr~~~~-~~~y~~A~~~L~~A~~~~~~~ 47 (203)
T 3t5x_A 14 VTYKYYVGRKAMF-DSDFKQAEEYLSFAFEHCHRS 47 (203)
T ss_dssp HHHHHHHHHHHHH-TTCHHHHHHHHHHHHHHSCTT
T ss_pred HHHHHHHHHHHHH-HhCHHHHHHHHHHHHHHCCHh
Confidence 4467889999887 899999999999999998765
No 266
>4gq2_M Nucleoporin NUP120; beta propeller alpha helical, component of nuclear pore COMP transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4fhm_B
Probab=90.07 E-value=3.6 Score=28.73 Aligned_cols=79 Identities=15% Similarity=0.072 Sum_probs=56.4
Q ss_pred HHHHhhCCChhHHHHHHHHHHHhhcChhhHHHHHHHHhccC-C--------------------CC--HHHHHHHHHHHHH
Q psy12719 18 RNFVDTHSNVVEACTLFAQVLVDQEDFDGAEEYFNRSIRVD-P--------------------EN--ASLYVHRAMLMLQ 74 (116)
Q Consensus 18 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~a~~~~-~--------------------~~--~~~~~~~~~~~~~ 74 (116)
...+...|.++-.-+.+|.++...|++++|..+|+++-.-- + .. ...|.....+ +.
T Consensus 830 ~eL~~~~~~t~~~~yv~gr~~L~~ge~~~A~~~F~kAA~gl~~~~~~~~~~~~~~~ll~~~e~~~~~~~YY~hV~~L-FE 908 (950)
T 4gq2_M 830 MQLIGWLNSDPIAVYLKALIYLKSKEAVKAVRCFKTTSLVLYSHTSQFAVLREFQEIAEKYHHQNLLSCYYLHLSKK-LF 908 (950)
T ss_dssp HHHGGGCCSSHHHHHHHHHHHHHTTCHHHHHHHHHTCCCTTCSSCCSCGGGHHHHHHHHHTTTCSHHHHHHHHHHHH-HH
T ss_pred HHHHhhcCCChHHHHHHHHHHHHcCCHHHHHHHHHHHhhhcccCcccccchhhhhhccCcccccchhHHHHHHHHHH-HH
Confidence 34556667777777899999999999999999999875311 0 00 1234455555 55
Q ss_pred hcCCHHHHHHHHHHHHhcC-CCcH
Q psy12719 75 ARGNVDEAIKLIEKAISID-KSCM 97 (116)
Q Consensus 75 ~~~~~~~a~~~~~~~~~~~-~~~~ 97 (116)
..+.++-+++..+.|++.- ++++
T Consensus 909 ~~~a~~~vi~fA~lAI~~~~~dd~ 932 (950)
T 4gq2_M 909 EESAYIDALEFSLLADASKETDDE 932 (950)
T ss_dssp HTTCHHHHHHHHHHHHHTCCSCCH
T ss_pred hcCCHHHHHHHHHHHHhhcccCCc
Confidence 5899999999999999753 4444
No 267
>2crb_A Nuclear receptor binding factor 2; NRBF-2, MIT domain, helix bundle, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: a.7.16.1
Probab=89.45 E-value=1 Score=21.87 Aligned_cols=28 Identities=11% Similarity=0.122 Sum_probs=22.5
Q ss_pred hHHHHHHHHHHHhhcChhhHHHHHHHHh
Q psy12719 28 VEACTLFAQVLVDQEDFDGAEEYFNRSI 55 (116)
Q Consensus 28 ~~~~~~~~~~~~~~~~~~~A~~~~~~a~ 55 (116)
+-.+...+..+...|+|++|+++.+++.
T Consensus 15 AH~~~RrAe~ll~~gkydeAIech~kAa 42 (97)
T 2crb_A 15 AHQQSRRADRLLAAGKYEEAISCHRKAT 42 (97)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHH
T ss_pred hhHhhhHHHHHHhcCCHHHHHHHHHHHH
Confidence 3456678888889999999998887765
No 268
>2cfu_A SDSA1; SDS-hydrolase, lactamase, hydrolase; HET: 1DB; 1.9A {Pseudomonas aeruginosa} SCOP: d.106.1.3 d.157.1.13 PDB: 2cfz_A* 2cg2_A 2cg3_A*
Probab=89.44 E-value=2.3 Score=28.32 Aligned_cols=50 Identities=12% Similarity=0.091 Sum_probs=42.1
Q ss_pred HHHHHHHHHHHhcCCHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHhhcccc
Q psy12719 64 LYVHRAMLMLQARGNVDEAIKLIEKAISIDKSCMFAYETLGTIEVQRTFVV 114 (116)
Q Consensus 64 ~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~ 114 (116)
.....+...+. .|+|.-|.+.+..++..+|++..+...++.++.++|...
T Consensus 451 ~~~~~a~~~~~-~g~~~wa~~l~~~~~~~~p~~~~a~~l~a~~~~~l~~~~ 500 (658)
T 2cfu_A 451 RLLEQARASYA-RGEYRWVVEVVNRLVFAEPDNRAARELQADALEQLGYQA 500 (658)
T ss_dssp HHHHHHHHHHH-TTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHH-CCCHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHHHhc
Confidence 34556666666 799999999999999999999999999999999887543
No 269
>2wpv_A GET4, UPF0363 protein YOR164C; golgi-ER trafficking, tail-anchored protein, protein binding GET4; 1.99A {Saccharomyces cerevisiae} PDB: 3lku_A
Probab=88.92 E-value=2.5 Score=25.43 Aligned_cols=66 Identities=12% Similarity=0.104 Sum_probs=46.2
Q ss_pred ChhHHHHHHHHHHHhhcChhhHHHHHHHHh----------------c---cCCCCHHHHHHHHHHHHHhcCCHHHHHHHH
Q psy12719 26 NVVEACTLFAQVLVDQEDFDGAEEYFNRSI----------------R---VDPENASLYVHRAMLMLQARGNVDEAIKLI 86 (116)
Q Consensus 26 ~~~~~~~~~~~~~~~~~~~~~A~~~~~~a~----------------~---~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~ 86 (116)
++++.+..+|..+...+++.+|..+|-..- . -.|.....+..++...+--.++...|...+
T Consensus 132 Gdp~LH~~~a~~~~~e~~~~~A~~H~i~~~~~s~~~~a~~l~~w~~~~~~~~~~e~dlf~~RaVL~yL~l~n~~~A~~~~ 211 (312)
T 2wpv_A 132 GDPYLHNTIGSKLLEGDFVYEAERYFMLGTHDSMIKYVDLLWDWLCQVDDIEDSTVAEFFSRLVFNYLFISNISFAHESK 211 (312)
T ss_dssp CCHHHHHHHHHHHHHTTCHHHHHHHHHTSCHHHHHHHHHHHHHHHHHTTCCCHHHHHHHHHHHHHHHHHTTBHHHHHHHH
T ss_pred CCHHHHHHHHHHHhhcCCHHHHHHHHHhCCCccHHHHHHHHHHHHHhcCCCCcchHHHHHHHHHHHHHHhcCHHHHHHHH
Confidence 568899999999999999999999885221 1 123334555556554444479999888887
Q ss_pred HHHHh
Q psy12719 87 EKAIS 91 (116)
Q Consensus 87 ~~~~~ 91 (116)
....+
T Consensus 212 ~~f~~ 216 (312)
T 2wpv_A 212 DIFLE 216 (312)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 76653
No 270
>2ijq_A Hypothetical protein; structural genomics, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 1.88A {Haloarcula marismortui} SCOP: a.246.2.1
Probab=88.86 E-value=1.7 Score=23.46 Aligned_cols=61 Identities=11% Similarity=0.111 Sum_probs=45.6
Q ss_pred HHHHHHHHHhhcChhhHHHHHHHHhccCCCC------HHHHHH-H--HHHHHHhcCCHHHHHHHHHHHHhc
Q psy12719 31 CTLFAQVLVDQEDFDGAEEYFNRSIRVDPEN------ASLYVH-R--AMLMLQARGNVDEAIKLIEKAISI 92 (116)
Q Consensus 31 ~~~~~~~~~~~~~~~~A~~~~~~a~~~~~~~------~~~~~~-~--~~~~~~~~~~~~~a~~~~~~~~~~ 92 (116)
-+..+..++..|+|-+|-++++.+-...+.. ...+.. + |..+++ .|+...|...+.+++..
T Consensus 35 ~~~~~i~lFn~g~yfeaHEvLEe~W~~~~~~~~er~~lqGLIQ~lAvAl~H~~-rgN~~GA~~ll~~Al~~ 104 (161)
T 2ijq_A 35 AVVHGVRLYNSGEFHESHDCFEDEWYNYGRGNTESKFLHGMVQVAAGAYKHFD-FEDDDGMRSLFRTSLQY 104 (161)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHTTTTCSSSHHHHHHHHHHHHHHHHHHHHH-HCCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHhCCCchHHHHHHHHHHHhcCCCchHHHHHHHHHHHHHHHHHHHH-hCCHHHHHHHHHHHHHH
Confidence 3566777888899999999999998876554 223333 3 334444 79999999999999874
No 271
>1wy6_A Hypothetical protein ST1625; helical repeat protein, structural genomics, unknown function; 2.20A {Sulfolobus tokodaii} SCOP: a.118.20.1
Probab=87.97 E-value=2 Score=22.98 Aligned_cols=104 Identities=8% Similarity=0.027 Sum_probs=66.7
Q ss_pred hhcHHHHHHHHHHHHhhCCChh------------------HHHHHHHHHH--HhhcChhhHHHHHHHHhccCCCCHHHHH
Q psy12719 7 RERVEQSLKEFRNFVDTHSNVV------------------EACTLFAQVL--VDQEDFDGAEEYFNRSIRVDPENASLYV 66 (116)
Q Consensus 7 ~~~~~~A~~~~~~~~~~~~~~~------------------~~~~~~~~~~--~~~~~~~~A~~~~~~a~~~~~~~~~~~~ 66 (116)
.|..++.+++..+.....|-.. .++-.+|..+ ...|+....+.+|-+. +..+. +.
T Consensus 20 dG~v~qGveii~k~~~ssni~E~NW~ICNiiD~a~C~y~v~vLd~IGkiFDis~C~NlKrVi~C~~~~---n~~se--~v 94 (172)
T 1wy6_A 20 DGYIDEGVKIVLEITKSSTKSEYNWFICNLLESIDCRYMFQVLDKIGSYFDLDKCQNLKSVVECGVIN---NTLNE--HV 94 (172)
T ss_dssp TTCHHHHHHHHHHHHHHSCHHHHTHHHHHHHHHCCHHHHHHHHHHHGGGSCGGGCSCTHHHHHHHHHT---TCCCH--HH
T ss_pred hhhHHHHHHHHHHHcCCCCccccceeeeecchhhchhHHHHHHHHHhhhcCcHhhhcHHHHHHHHHHh---cchHH--HH
Confidence 4666777777777776665331 1223344432 2567788888888643 33333 33
Q ss_pred HHHHHHHHhcCCHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHhhccccc
Q psy12719 67 HRAMLMLQARGNVDEAIKLIEKAISIDKSCMFAYETLGTIEVQRTFVVL 115 (116)
Q Consensus 67 ~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~ 115 (116)
.++.-.+-.+|.-++-.+.+...+...+-.|..+..++.+|...|+..+
T Consensus 95 d~ALd~lv~~~KkDqLdki~~~~l~n~~~~~~~l~kia~Ay~Klg~~r~ 143 (172)
T 1wy6_A 95 NKALDILVIQGKRDKLEEIGREILKNNEVSASILVAIANALRRVGDERD 143 (172)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHHC--CCSCHHHHHHHHHHHHHTTCHHH
T ss_pred HHHHHHHHHhccHhHHHHHHHHHhccCCCChHHHHHHHHHHHHhcchhh
Confidence 4444444447888888888888777777778999999999999887654
No 272
>2ijq_A Hypothetical protein; structural genomics, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 1.88A {Haloarcula marismortui} SCOP: a.246.2.1
Probab=87.70 E-value=2.1 Score=23.12 Aligned_cols=53 Identities=19% Similarity=0.071 Sum_probs=38.6
Q ss_pred cchhcHHHHHHHHHHHHhhCCCh---hHHH------HHHHHHHHhhcChhhHHHHHHHHhcc
Q psy12719 5 GDRERVEQSLKEFRNFVDTHSNV---VEAC------TLFAQVLVDQEDFDGAEEYFNRSIRV 57 (116)
Q Consensus 5 ~~~~~~~~A~~~~~~~~~~~~~~---~~~~------~~~~~~~~~~~~~~~A~~~~~~a~~~ 57 (116)
++.|+|-+|-+.++..-...+.. ...+ ...|..+.+.|+...|...+.+++..
T Consensus 43 Fn~g~yfeaHEvLEe~W~~~~~~~~er~~lqGLIQ~lAvAl~H~~rgN~~GA~~ll~~Al~~ 104 (161)
T 2ijq_A 43 YNSGEFHESHDCFEDEWYNYGRGNTESKFLHGMVQVAAGAYKHFDFEDDDGMRSLFRTSLQY 104 (161)
T ss_dssp HHTTCHHHHHHHHHHHTTTTCSSSHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHH
T ss_pred HhCCCchHHHHHHHHHHHhcCCCchHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHH
Confidence 45689999999999998776543 2222 22344556899999999999998763
No 273
>1om2_A Protein (mitochondrial import receptor subunit TOM20); mitochondrial protein import across outer membrane, receptor for presequences; NMR {Rattus norvegicus} SCOP: a.23.4.1
Probab=87.40 E-value=1.1 Score=21.93 Aligned_cols=32 Identities=16% Similarity=0.259 Sum_probs=24.9
Q ss_pred HHHHHHHHhhcChhhHHHHHHHHhccCCCCHH
Q psy12719 32 TLFAQVLVDQEDFDGAEEYFNRSIRVDPENAS 63 (116)
Q Consensus 32 ~~~~~~~~~~~~~~~A~~~~~~a~~~~~~~~~ 63 (116)
..+|..+...|+++.|..+|-+|+...|+-..
T Consensus 24 V~lGE~L~~~g~~e~av~Hf~nAl~Vc~qP~~ 55 (95)
T 1om2_A 24 IQLGEELLAQGDYEKGVDHLTNAIAVCGQPQQ 55 (95)
T ss_dssp HHHHHHHHHHTCHHHHHHHHHHHHHHHSCHHH
T ss_pred HHHHHHHHHCCCHHHHHHHHHHHHHHcCCHHH
Confidence 45788888888888898888888887776544
No 274
>3efz_A 14-3-3 protein; 14-3-3, cell regulation, structural genom structural genomics consortium, SGC; HET: SEP; 2.08A {Cryptosporidium parvum} SCOP: a.118.7.1 PDB: 2ijp_A*
Probab=86.62 E-value=3 Score=24.59 Aligned_cols=49 Identities=20% Similarity=0.407 Sum_probs=35.7
Q ss_pred hhhHHHHHHHHhc-----c--CCCCHH---HHHHHHHHHHHhcCCHHHHHHHHHHHHhc
Q psy12719 44 FDGAEEYFNRSIR-----V--DPENAS---LYVHRAMLMLQARGNVDEAIKLIEKAISI 92 (116)
Q Consensus 44 ~~~A~~~~~~a~~-----~--~~~~~~---~~~~~~~~~~~~~~~~~~a~~~~~~~~~~ 92 (116)
.+.|...|+.|.. + .|.+|. ...+.+..|+..++++++|+...+++++.
T Consensus 168 ~e~a~~aYq~A~eiA~~~L~~~pThPiRLGLaLNfSVFyYEIln~p~~Ac~lAk~AFde 226 (268)
T 3efz_A 168 IKQAVEFYEDALQRERSFLEKYPSDPLYLATILNYTILKYDLLGNPEGAMKFANRAIQA 226 (268)
T ss_dssp HHHHHHHHHHHHHHHHHHCTTGGGCHHHHHHHHHHHHHHHTTTCCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHhcCCCCCChHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHhh
Confidence 3566677777653 3 566654 45667777787899999999999998765
No 275
>2npm_A 14-3-3 domain containing protein; cell regulator protein 14-3-3, struc genomics, structural genomics consortium, SGC, protein BIND; HET: SEP; 2.52A {Cryptosporidium parvum}
Probab=86.20 E-value=3.6 Score=24.16 Aligned_cols=48 Identities=13% Similarity=0.262 Sum_probs=35.5
Q ss_pred hhHHHHHHHHhc----cCCCCHH---HHHHHHHHHHHhcCCHHHHHHHHHHHHhc
Q psy12719 45 DGAEEYFNRSIR----VDPENAS---LYVHRAMLMLQARGNVDEAIKLIEKAISI 92 (116)
Q Consensus 45 ~~A~~~~~~a~~----~~~~~~~---~~~~~~~~~~~~~~~~~~a~~~~~~~~~~ 92 (116)
+.|...|+.|.. +.|.+|. ...+.+..|+..++++++|+...++++..
T Consensus 173 e~a~~aY~~A~~iA~~L~pthPirLGLaLNfSVFyYEiln~~~~Ac~lAk~Afd~ 227 (260)
T 2npm_A 173 EDALKAYKDATVVAKDLEPTHPIRLGLALNFSVFHYEILNEPRAAIDMAKEAFEM 227 (260)
T ss_dssp HHHHHHHHHHHHHHTTSCTTCHHHHHHHHHHHHHHHHTSCCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhCCCCCcHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHH
Confidence 466777877764 4566653 45667777788899999999988888753
No 276
>2br9_A 14-3-3E, 14-3-3 protein epsilon; cell regulator protein, 14-3-3, phosphoserine, structural GE consortium, SGC, ywhae; HET: SEP; 1.75A {Homo sapiens} PDB: 3ual_A* 2o98_A* 3m50_A* 3m51_A* 3axy_C*
Probab=85.48 E-value=3.7 Score=23.68 Aligned_cols=47 Identities=13% Similarity=0.223 Sum_probs=34.9
Q ss_pred hhHHHHHHHHhc-----cCCCCHH---HHHHHHHHHHHhcCCHHHHHHHHHHHHh
Q psy12719 45 DGAEEYFNRSIR-----VDPENAS---LYVHRAMLMLQARGNVDEAIKLIEKAIS 91 (116)
Q Consensus 45 ~~A~~~~~~a~~-----~~~~~~~---~~~~~~~~~~~~~~~~~~a~~~~~~~~~ 91 (116)
+.|...|+.|+. +.|.+|. ...+.+..|+...+++++|+...++++.
T Consensus 147 e~a~~aY~~A~~iA~~~L~pthPirLgLaLN~SVF~yEil~~~~~A~~lAk~afd 201 (234)
T 2br9_A 147 ENSLVAYKAASDIAMTELPPTHPIRLGLALNFSVFYYEILNSPDRACRLAKAAFD 201 (234)
T ss_dssp HHHHHHHHHHHHHHHHHSCTTCHHHHHHHHHHHHHHHHTSCCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHccCCCCCcHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHH
Confidence 466777777764 4566654 4566777778889999999998888775
No 277
>3iqu_A 14-3-3 protein sigma; signal transuction, nucleus, phosphoprotein, secreted, prote binding, signaling protein; HET: SEP; 1.05A {Homo sapiens} SCOP: a.118.7.1 PDB: 3iqj_A* 3iqv_A* 3mhr_A* 3lw1_A* 3o8i_A* 3p1n_A* 3p1o_A* 3t0l_A* 3t0m_A* 3u9x_A* 3ux0_A* 4dat_A* 4dau_A* 3p1s_A* 3p1r_A* 3smk_A* 3spr_A* 3p1q_A* 3p1p_A* 3sml_A* ...
Probab=85.46 E-value=3.7 Score=23.70 Aligned_cols=48 Identities=19% Similarity=0.358 Sum_probs=35.3
Q ss_pred hhhHHHHHHHHhc-----cCCCCHH---HHHHHHHHHHHhcCCHHHHHHHHHHHHh
Q psy12719 44 FDGAEEYFNRSIR-----VDPENAS---LYVHRAMLMLQARGNVDEAIKLIEKAIS 91 (116)
Q Consensus 44 ~~~A~~~~~~a~~-----~~~~~~~---~~~~~~~~~~~~~~~~~~a~~~~~~~~~ 91 (116)
.+.|...|+.|.. +.|.+|. ...+.+..|+...+++++|+...++++.
T Consensus 149 ~e~a~~aY~~A~~iA~~~L~pthPirLGLaLNfSVFyyEiln~~~~Ac~lAk~Afd 204 (236)
T 3iqu_A 149 IDSARSAYQEAMDISKKEMPPTNPIRLGLALNFSVFHYEIANSPEEAISLAKTTFD 204 (236)
T ss_dssp HHHHHHHHHHHHHHHHHHSCTTCHHHHHHHHHHHHHHHHTSSCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHhhCCCCCcHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHH
Confidence 3567777877754 5567654 4566777788889999999998888765
No 278
>1o9d_A 14-3-3-like protein C; protein-binding, fusicoccin, 14-3-3 family, activating drug; HET: TPO; 2.3A {Nicotiana tabacum} SCOP: a.118.7.1 PDB: 1o9c_A* 1o9e_A* 1o9f_A* 3e6y_A*
Probab=84.93 E-value=4.2 Score=23.86 Aligned_cols=48 Identities=13% Similarity=0.211 Sum_probs=35.4
Q ss_pred hhHHHHHHHHhc-----cCCCCHH---HHHHHHHHHHHhcCCHHHHHHHHHHHHhc
Q psy12719 45 DGAEEYFNRSIR-----VDPENAS---LYVHRAMLMLQARGNVDEAIKLIEKAISI 92 (116)
Q Consensus 45 ~~A~~~~~~a~~-----~~~~~~~---~~~~~~~~~~~~~~~~~~a~~~~~~~~~~ 92 (116)
+.|...|+.|.. +.|.+|. ...+.+..|+..++++++|+...++++..
T Consensus 152 e~a~~aY~~A~~iA~~~L~pthPirLGLaLNfSVFyYEiln~~~~Ac~lAk~Afd~ 207 (260)
T 1o9d_A 152 ESTLTAYKAAQDIATTELAPTHPIRLGLALNFSVFYYEILNSPDRACNLAKQAFDE 207 (260)
T ss_dssp HHHHHHHHHHHHHHHHHSCTTCHHHHHHHHHHHHHHHHTSCCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhcCCCCCcHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHH
Confidence 467777877764 4666654 45677777888899999999988887753
No 279
>2crb_A Nuclear receptor binding factor 2; NRBF-2, MIT domain, helix bundle, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: a.7.16.1
Probab=84.91 E-value=2.3 Score=20.73 Aligned_cols=29 Identities=34% Similarity=0.331 Sum_probs=22.3
Q ss_pred HHHHHHHHHHHHHhcCCHHHHHHHHHHHHh
Q psy12719 62 ASLYVHRAMLMLQARGNVDEAIKLIEKAIS 91 (116)
Q Consensus 62 ~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~ 91 (116)
+..+-.++..++. .|+|++|+++.+++..
T Consensus 15 AH~~~RrAe~ll~-~gkydeAIech~kAa~ 43 (97)
T 2crb_A 15 AHQQSRRADRLLA-AGKYEEAISCHRKATT 43 (97)
T ss_dssp HHHHHHHHHHHHH-TTCHHHHHHHHHHHHH
T ss_pred hhHhhhHHHHHHh-cCCHHHHHHHHHHHHH
Confidence 4456678888777 8999999988777763
No 280
>3uzd_A 14-3-3 protein gamma; structural genomics, SGC, structural genomics consortium, MA alpha, phosphoserine, phosphothreonine; HET: SEP; 1.86A {Homo sapiens} PDB: 4e2e_A 2b05_A* 2c63_A* 2c74_A* 4dnk_A 4gnt_A 2bq0_A 2c23_A 2c1n_A* 2c1j_A* 2btp_A*
Probab=84.83 E-value=4.1 Score=23.71 Aligned_cols=47 Identities=13% Similarity=0.321 Sum_probs=34.8
Q ss_pred hhHHHHHHHHhc-----cCCCCHH---HHHHHHHHHHHhcCCHHHHHHHHHHHHh
Q psy12719 45 DGAEEYFNRSIR-----VDPENAS---LYVHRAMLMLQARGNVDEAIKLIEKAIS 91 (116)
Q Consensus 45 ~~A~~~~~~a~~-----~~~~~~~---~~~~~~~~~~~~~~~~~~a~~~~~~~~~ 91 (116)
+.|...|+.|.. +.|.+|. ...+.+..|+..++++++|+...++++.
T Consensus 148 ~~a~~aY~~A~~iA~~~L~pthPirLGLaLNfSVFyYEIln~~~~Ac~lAk~Afd 202 (248)
T 3uzd_A 148 ESSEKAYSEAHEISKEHMQPTHPIRLGLALNYSVFYYEIQNAPEQACHLAKTAFD 202 (248)
T ss_dssp HHHHHHHHHHHHHHHHHSCTTCHHHHHHHHHHHHHHHHTSCCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhhCCCCCcHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHH
Confidence 566777777654 5566654 4567777788889999999998887765
No 281
>3esl_A Checkpoint serine/threonine-protein kinase BUB1; mitotic spindle checkpoint, TPR motif, all-alpha domain, MAD3-like domain; HET: NHE; 1.74A {Saccharomyces cerevisiae}
Probab=84.32 E-value=3.9 Score=23.01 Aligned_cols=69 Identities=13% Similarity=0.165 Sum_probs=48.5
Q ss_pred CCChhHHHHHHHHHHHhhcChhhHHHHHHHHhc--cCCCCHHHHHHHHHHHHHhcCCHHHHHHHHHHHHhcCC
Q psy12719 24 HSNVVEACTLFAQVLVDQEDFDGAEEYFNRSIR--VDPENASLYVHRAMLMLQARGNVDEAIKLIEKAISIDK 94 (116)
Q Consensus 24 ~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~a~~--~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~ 94 (116)
+|....+|..++..+ ..+...++...|..+.. +....+..|...|..+.. .|++.+|.+.|+..++...
T Consensus 76 D~RYLklWl~Ya~~~-~~~~~~~p~~if~~L~~~~IG~~~AlfYe~wA~~lE~-~g~~~~A~~Vy~~GI~~~A 146 (202)
T 3esl_A 76 DPRFLKIWIWYINLF-LSNNFHESENTFKYMFNKGIGTKLSLFYEEFSKLLEN-AQFFLEAKVLLELGAENNC 146 (202)
T ss_dssp CHHHHHHHHHHHHHH-STTCHHHHHHHHHHHHHHTSSTTBHHHHHHHHHHHHH-TTCHHHHHHHHHHHHHTTC
T ss_pred CHHHHHHHHHHHHhh-cccccCCHHHHHHHHHHCCCcHHHHHHHHHHHHHHHH-cCCHHHHHHHHHHHHHcCC
Confidence 344566777777765 23445677777776654 455667777788887665 8999999999999988653
No 282
>3esl_A Checkpoint serine/threonine-protein kinase BUB1; mitotic spindle checkpoint, TPR motif, all-alpha domain, MAD3-like domain; HET: NHE; 1.74A {Saccharomyces cerevisiae}
Probab=83.59 E-value=4.3 Score=22.86 Aligned_cols=52 Identities=12% Similarity=0.140 Sum_probs=38.2
Q ss_pred HHHHHHHHHHHHhhC--CChhHHHHHHHHHHHhhcChhhHHHHHHHHhccCCCC
Q psy12719 10 VEQSLKEFRNFVDTH--SNVVEACTLFAQVLVDQEDFDGAEEYFNRSIRVDPEN 61 (116)
Q Consensus 10 ~~~A~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~A~~~~~~a~~~~~~~ 61 (116)
..++.++|....... ...+..|...|..+...|++.+|..+|+.+++..-..
T Consensus 95 ~~~p~~if~~L~~~~IG~~~AlfYe~wA~~lE~~g~~~~A~~Vy~~GI~~~A~P 148 (202)
T 3esl_A 95 FHESENTFKYMFNKGIGTKLSLFYEEFSKLLENAQFFLEAKVLLELGAENNCRP 148 (202)
T ss_dssp HHHHHHHHHHHHHHTSSTTBHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTTCBS
T ss_pred cCCHHHHHHHHHHCCCcHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHcCCcc
Confidence 446666666665543 4556778888888888999999999999888876443
No 283
>2rpa_A Katanin P60 ATPase-containing subunit A1; AAA ATPase, ATP-binding, cell cycle, cell division, cytoplas hydrolase, microtubule; NMR {Mus musculus}
Probab=83.54 E-value=1.9 Score=20.21 Aligned_cols=27 Identities=15% Similarity=0.215 Sum_probs=21.0
Q ss_pred HHHHHHHHHhhcChhhHHHHHHHHhcc
Q psy12719 31 CTLFAQVLVDQEDFDGAEEYFNRSIRV 57 (116)
Q Consensus 31 ~~~~~~~~~~~~~~~~A~~~~~~a~~~ 57 (116)
...+|+-+...|+|+.|+.+|+.++..
T Consensus 15 ~~k~ARe~Al~GnYdta~~yY~g~~~q 41 (78)
T 2rpa_A 15 NVKLAREYALLGNYDSAMVYYQGVLDQ 41 (78)
T ss_dssp HHHHHHHHHHHTCCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhcChHHHHHHHHHHHHH
Confidence 346777788889999999999887643
No 284
>4gq2_M Nucleoporin NUP120; beta propeller alpha helical, component of nuclear pore COMP transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4fhm_B
Probab=83.52 E-value=9.4 Score=26.77 Aligned_cols=52 Identities=10% Similarity=0.131 Sum_probs=40.1
Q ss_pred HHHHHHhhcChhhHHHHHHHHhccCCCCHHHHHHHHHHHHHhcCCHHHHHHHHHHHH
Q psy12719 34 FAQVLVDQEDFDGAEEYFNRSIRVDPENASLYVHRAMLMLQARGNVDEAIKLIEKAI 90 (116)
Q Consensus 34 ~~~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~ 90 (116)
+...+...+.++-+ +..+...|.++..-|.+|.+++. .|++++|..+|+++-
T Consensus 816 l~~~L~~~~~~~~a----~eL~~~~~~t~~~~yv~gr~~L~-~ge~~~A~~~F~kAA 867 (950)
T 4gq2_M 816 LVEKLFLFKQYNAC----MQLIGWLNSDPIAVYLKALIYLK-SKEAVKAVRCFKTTS 867 (950)
T ss_dssp HHHHHHHTTCHHHH----HHHGGGCCSSHHHHHHHHHHHHH-TTCHHHHHHHHHTCC
T ss_pred HHHHHHHhcHHHHH----HHHHhhcCCChHHHHHHHHHHHH-cCCHHHHHHHHHHHh
Confidence 44455566766544 34566778888888999999998 999999999998875
No 285
>2o8p_A 14-3-3 domain containing protein; signaling protein, 14-3-3, cell regulator protein, cryptospo parvum, structural genomics; HET: MSE; 1.82A {Cryptosporidium parvum} SCOP: a.118.7.1
Probab=83.32 E-value=4.7 Score=23.15 Aligned_cols=62 Identities=6% Similarity=0.142 Sum_probs=45.4
Q ss_pred HHHHHHHHH-----hhcChhhHHHHHHHHhcc-----CCCC---HHHHHHHHHHHHHhcCCHHHHHHHHHHHHhc
Q psy12719 31 CTLFAQVLV-----DQEDFDGAEEYFNRSIRV-----DPEN---ASLYVHRAMLMLQARGNVDEAIKLIEKAISI 92 (116)
Q Consensus 31 ~~~~~~~~~-----~~~~~~~A~~~~~~a~~~-----~~~~---~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~ 92 (116)
+...|..|. ..|+.+.|...|+.|..+ .|.+ .....+.+..|+..++++++|+...++++..
T Consensus 123 ~KMKGDYyRYlAE~~~g~~e~a~~aY~~A~~iA~~~L~pthPirLGLaLNfSVFyYEIln~p~~Ac~lAk~Afd~ 197 (227)
T 2o8p_A 123 LKVKSDISRYKLEFGLCSLEDSKKIHQDAFTLLCEHPDKIEQLPLGFIQNLAYILSEKYGEKKQVFNMLNSLGKI 197 (227)
T ss_dssp HHHHHHHHHHHHHTTSSCHHHHHHHHHHHHHHHHHCGGGGGGSCHHHHHHHHHHHHHTSSCHHHHHHHHHHHHHH
T ss_pred HHHhhhHHHHHHHHccccHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHH
Confidence 444566554 355677888888887653 3333 4567788888898899999999999999664
No 286
>3t5v_B Nuclear mRNA export protein THP1; PCI, mRNA nuclear export, mRNA, nuclear, transcription; 2.90A {Saccharomyces cerevisiae}
Probab=82.76 E-value=1.9 Score=27.39 Aligned_cols=33 Identities=15% Similarity=0.051 Sum_probs=29.2
Q ss_pred HHHHHHHHHHHhhcChhhHHHHHHHHhcc-CCCC
Q psy12719 29 EACTLFAQVLVDQEDFDGAEEYFNRSIRV-DPEN 61 (116)
Q Consensus 29 ~~~~~~~~~~~~~~~~~~A~~~~~~a~~~-~~~~ 61 (116)
...+.+|..+...++|.+|.+.+..|++. .|..
T Consensus 221 ~Y~YYlGr~~~~~~~y~~A~~~L~~A~~~lcp~~ 254 (455)
T 3t5v_B 221 EYRYLLGRYYLLNSQVHNAFVQFNEAFQSLLNLP 254 (455)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHCC
T ss_pred eeeHHHHHHHHHHccHHHHHHHHHHHHHhcCCcc
Confidence 46788999999999999999999999998 6654
No 287
>3ubw_A 14-3-3E, 14-3-3 protein epsilon; adapter protein, signaling protein, signaling protein-protei complex; HET: SEP; 1.90A {Homo sapiens}
Probab=81.90 E-value=5.9 Score=23.28 Aligned_cols=47 Identities=13% Similarity=0.223 Sum_probs=34.7
Q ss_pred hhHHHHHHHHhc-----cCCCCHH---HHHHHHHHHHHhcCCHHHHHHHHHHHHh
Q psy12719 45 DGAEEYFNRSIR-----VDPENAS---LYVHRAMLMLQARGNVDEAIKLIEKAIS 91 (116)
Q Consensus 45 ~~A~~~~~~a~~-----~~~~~~~---~~~~~~~~~~~~~~~~~~a~~~~~~~~~ 91 (116)
+.|...|+.|.. +.|.+|. ...+.+..|+..++++++|+...++++.
T Consensus 173 e~a~~aY~~A~~iA~~~L~pThPirLGLaLNfSVFyYEIln~p~~Ac~LAk~AFd 227 (261)
T 3ubw_A 173 ENSLVAYKAASDIAMTELPPTHPIRLGLALNFSVFYYEILNSPDRACRLAKAAFD 227 (261)
T ss_dssp HHHHHHHHHHHHHHHHHSCTTCHHHHHHHHHHHHHHHHTSCCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhhCCCCCcHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHH
Confidence 566777777754 4566654 4566777778889999999998888765
No 288
>3ax2_A Mitochondrial import receptor subunit TOM20 homol; protein-protein complex, membrane protein-transport protein; 1.90A {Rattus norvegicus} PDB: 2v1s_A 3awr_A 2v1t_A 3ax5_A 3ax3_A
Probab=81.60 E-value=2.8 Score=19.39 Aligned_cols=35 Identities=11% Similarity=0.226 Sum_probs=28.3
Q ss_pred HHHHHHHHHhcCCHHHHHHHHHHHHhcCCCcHHHHH
Q psy12719 66 VHRAMLMLQARGNVDEAIKLIEKAISIDKSCMFAYE 101 (116)
Q Consensus 66 ~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~ 101 (116)
..+|..+.. .|+++++...+-+|+...|.-.....
T Consensus 21 V~~GE~L~~-~g~~~~~~~hf~nAl~Vc~qP~~LL~ 55 (73)
T 3ax2_A 21 IQLGEELLA-QGDYEKGVDHLTNAIAVCGQPQQLLQ 55 (73)
T ss_dssp HHHHHHHHH-TTCHHHHHHHHHHHHHTCSSCHHHHH
T ss_pred HHHHHHHHH-CCCHHHHHHHHHHHHHHcCCHHHHHH
Confidence 468888777 89999999999999999887554433
No 289
>2w2u_A Hypothetical P60 katanin; hydrolase transport complex, nucleotide-binding, ESCRT, AAA-ATPase, cytokinesis, ATP-binding; 2.20A {Sulfolobus acidocaldarius}
Probab=80.98 E-value=3.2 Score=19.66 Aligned_cols=18 Identities=11% Similarity=0.206 Sum_probs=10.1
Q ss_pred HHhhcChhhHHHHHHHHh
Q psy12719 38 LVDQEDFDGAEEYFNRSI 55 (116)
Q Consensus 38 ~~~~~~~~~A~~~~~~a~ 55 (116)
.-..|++++|+.+|..++
T Consensus 29 ~D~~g~y~eAl~lY~~ai 46 (83)
T 2w2u_A 29 ADKEGNAEEAITNYKKAI 46 (83)
T ss_dssp HHHTTCHHHHHHHHHHHH
T ss_pred HHHhccHHHHHHHHHHHH
Confidence 345566666666555554
No 290
>3myv_A SUSD superfamily protein; RAGB, SUSD and hypothetical proteins, structural genomics, J center for structural genomics, JCSG; HET: MSE; 1.80A {Bacteroides vulgatus}
Probab=79.70 E-value=7.7 Score=24.50 Aligned_cols=27 Identities=22% Similarity=0.299 Sum_probs=17.7
Q ss_pred HHHHHHHHHHhhcChhhHHHHHHHHhc
Q psy12719 30 ACTLFAQVLVDQEDFDGAEEYFNRSIR 56 (116)
Q Consensus 30 ~~~~~~~~~~~~~~~~~A~~~~~~a~~ 56 (116)
++..++.++...++|++|....+.++.
T Consensus 192 a~allarvyL~~~~~~~A~~~a~~vi~ 218 (454)
T 3myv_A 192 ARALLARIYLYHDDNRKAFDLADQLIK 218 (454)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhcccHHHHHHHHHHHHh
Confidence 555666666667777777766666653
No 291
>3kez_A Putative sugar binding protein; structural genomics, joint C structural genomics, JCSG, protein structure initiative; 1.90A {Bacteroides vulgatus atcc 8482}
Probab=78.55 E-value=7.9 Score=24.50 Aligned_cols=27 Identities=22% Similarity=0.383 Sum_probs=18.7
Q ss_pred HHHHHHHHHHhhcChhhHHHHHHHHhc
Q psy12719 30 ACTLFAQVLVDQEDFDGAEEYFNRSIR 56 (116)
Q Consensus 30 ~~~~~~~~~~~~~~~~~A~~~~~~a~~ 56 (116)
++..+|.++...++|++|....+.++.
T Consensus 198 a~allArvyL~~~~~~~A~~~a~~vi~ 224 (461)
T 3kez_A 198 AMTLLSRVYLYKGEYNEALTMAENAIK 224 (461)
T ss_dssp HHHHHHHHHHHHTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhCCHHHHHHHHHHHHh
Confidence 566667777777777777777766654
No 292
>2v6y_A AAA family ATPase, P60 katanin; MIT, VPS4, archaea, AAA-ATPase, ATP-binding, microtubule INT and trafficking domain, nucleotide-binding; HET: SRT; 2.40A {Sulfolobus solfataricus} PDB: 2v6y_B*
Probab=77.67 E-value=4.3 Score=19.16 Aligned_cols=17 Identities=18% Similarity=0.452 Sum_probs=9.6
Q ss_pred HhhcChhhHHHHHHHHh
Q psy12719 39 VDQEDFDGAEEYFNRSI 55 (116)
Q Consensus 39 ~~~~~~~~A~~~~~~a~ 55 (116)
-..|++++|+.+|..++
T Consensus 22 D~~g~y~eAl~lY~~ai 38 (83)
T 2v6y_A 22 DKEGKVEDAITYYKKAI 38 (83)
T ss_dssp HHTTCHHHHHHHHHHHH
T ss_pred HHhccHHHHHHHHHHHH
Confidence 45566666665555544
No 293
>4a5x_A MITD1, MIT domain-containing protein 1; protein transport, ESCRT, cytokinesis, midbody; HET: P15; 1.91A {Homo sapiens}
Probab=77.66 E-value=4.4 Score=19.30 Aligned_cols=22 Identities=18% Similarity=0.200 Sum_probs=12.8
Q ss_pred HHHHHhhcChhhHHHHHHHHhc
Q psy12719 35 AQVLVDQEDFDGAEEYFNRSIR 56 (116)
Q Consensus 35 ~~~~~~~~~~~~A~~~~~~a~~ 56 (116)
|.-.-..|++++|+.+|..++.
T Consensus 23 Ave~D~~g~y~eAl~lY~~Aie 44 (86)
T 4a5x_A 23 AVELDSESRYPQALVCYQEGID 44 (86)
T ss_dssp HHHHHHTTCHHHHHHHHHHHHH
T ss_pred HHHHHHcCCHHHHHHHHHHHHH
Confidence 3334456666666666666553
No 294
>1om2_A Protein (mitochondrial import receptor subunit TOM20); mitochondrial protein import across outer membrane, receptor for presequences; NMR {Rattus norvegicus} SCOP: a.23.4.1
Probab=77.56 E-value=4.8 Score=19.69 Aligned_cols=31 Identities=13% Similarity=0.277 Sum_probs=25.4
Q ss_pred HHHHHHHHHhcCCHHHHHHHHHHHHhcCCCcH
Q psy12719 66 VHRAMLMLQARGNVDEAIKLIEKAISIDKSCM 97 (116)
Q Consensus 66 ~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~ 97 (116)
..+|..+.. .|+++.|+..|-+|+...|.-.
T Consensus 24 V~lGE~L~~-~g~~e~av~Hf~nAl~Vc~qP~ 54 (95)
T 1om2_A 24 IQLGEELLA-QGDYEKGVDHLTNAIAVCGQPQ 54 (95)
T ss_dssp HHHHHHHHH-HTCHHHHHHHHHHHHHHHSCHH
T ss_pred HHHHHHHHH-CCCHHHHHHHHHHHHHHcCCHH
Confidence 467888777 7999999999999999877643
No 295
>3bu8_A Telomeric repeat-binding factor 2; TRF2 TRFH domain TRF2 dimerization domain TIN2 peptide, alternative splicing, cell cycle, chromosomal protein; 2.15A {Homo sapiens} SCOP: a.146.1.1 PDB: 3bua_A* 1h6p_A
Probab=77.51 E-value=2.2 Score=24.33 Aligned_cols=58 Identities=9% Similarity=0.198 Sum_probs=38.0
Q ss_pred HHHHHHhhcChhhHHHHHHHHhccCCCCHHHHHHHHHHHHHhc---------CCHHHHHHHHHHHHhc
Q psy12719 34 FAQVLVDQEDFDGAEEYFNRSIRVDPENASLYVHRAMLMLQAR---------GNVDEAIKLIEKAISI 92 (116)
Q Consensus 34 ~~~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~~~~---------~~~~~a~~~~~~~~~~ 92 (116)
...++.+.|.|++|.+.+++.+..+|.+......+..+ .... -.|+.-.+.....++.
T Consensus 120 AV~VCiek~~f~kA~eiLkr~~~~~~s~~kLr~kL~~I-I~~Kd~~H~~lqnFSy~~~~~ki~~fve~ 186 (235)
T 3bu8_A 120 AVIICIKNKEFEKASKILKKHMSKDPTTQKLRNDLLNI-IREKNLAHPVIQNFSYETFQQKMLRFLES 186 (235)
T ss_dssp HHHHHHHTTCHHHHHHHHHHHSTTCGGGHHHHHHHHHH-HHHTCTTSHHHHTCCHHHHHHHHHHHHHT
T ss_pred HHHHHHHhcchHHHHHHHHHHhcCCCCchHHHHHHHHH-HhccCcccHHHHhccHHHHHHHHHHHHHH
Confidence 34456789999999999999888877776666666665 3312 2355555555555544
No 296
>3re2_A Predicted protein; menin, multiple endocrine neoplasia 1, tumor suppressor, MIX lineage leukemia, unknown function; 1.95A {Nematostella vectensis}
Probab=77.30 E-value=11 Score=23.66 Aligned_cols=77 Identities=18% Similarity=0.067 Sum_probs=47.3
Q ss_pred hHHHHHHHHHHHh--hcChhhHHHHHHHHhccC-----CCCHHHHHHHHHHHHHhcCCHHHHHHHHHHHHhc------CC
Q psy12719 28 VEACTLFAQVLVD--QEDFDGAEEYFNRSIRVD-----PENASLYVHRAMLMLQARGNVDEAIKLIEKAISI------DK 94 (116)
Q Consensus 28 ~~~~~~~~~~~~~--~~~~~~A~~~~~~a~~~~-----~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~------~~ 94 (116)
+.+..++|.+--. ......++..|.+++... ......+..+|..+++ .+++.+|+..+..+-.. ..
T Consensus 255 PmALgnLgDLEe~~pt~gr~~~l~L~~~AI~sa~~yY~n~HvYPYtylgGy~yR-~~~~reAl~~WA~Aa~Vi~~YNY~r 333 (472)
T 3re2_A 255 PMAIANLGDLEEISPTPGRPPAEELFKEAITVAKREYSDHHIYPYTYLGGYYYR-KKKYYEAIASWVDAGYVAGKYNYSK 333 (472)
T ss_dssp HHHHHHHHHHHHHSCCTTSCCHHHHHHHHHHHHHHHSTTCCSHHHHHHHHHHHH-TTCHHHHHHHHHHHHHHHTTSCCCG
T ss_pred chhhcchhhHHhcCCCCCCCCHHHHHHHHHHHHHHHhccCCccchhhhhhhhhh-cchHHHHHHHHHHHHHHHHHcCCCc
Confidence 4455556555332 122234677777776542 3345667778888787 89999999999877653 34
Q ss_pred CcHHHHHHHHH
Q psy12719 95 SCMFAYETLGT 105 (116)
Q Consensus 95 ~~~~~~~~l~~ 105 (116)
++.+.+..+-.
T Consensus 334 eDeEIYKEf~e 344 (472)
T 3re2_A 334 DDEEMYKEFHE 344 (472)
T ss_dssp GGHHHHHHHHH
T ss_pred cHHHHHHHHHH
Confidence 45555554433
No 297
>3mcx_A SUSD superfamily protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE GOL; 1.49A {Bacteroides thetaiotaomicron}
Probab=77.11 E-value=9.1 Score=24.32 Aligned_cols=47 Identities=17% Similarity=0.237 Sum_probs=28.6
Q ss_pred HHHHHHHHHHHHhhCCCh--------hHHHHHHHHHHHhhcChhhHHHHHHHHhc
Q psy12719 10 VEQSLKEFRNFVDTHSNV--------VEACTLFAQVLVDQEDFDGAEEYFNRSIR 56 (116)
Q Consensus 10 ~~~A~~~~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~A~~~~~~a~~ 56 (116)
++..+..++.++..-|.. .-++..+|.++...++|++|....++++.
T Consensus 176 y~~I~~DL~~A~~~L~~~~~~gr~tk~aa~allarvyL~~~~~~~A~~~a~~vi~ 230 (477)
T 3mcx_A 176 YEQVVSDMSNALSGLRQETSNGYINYWAAQALLSRVYLNMGEYQKAYDAATDVIK 230 (477)
T ss_dssp HHHHHHHHHHHGGGSCSSCCTTSCCHHHHHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhCcccccCCcCcHHHHHHHHHHHHHHhcCHHHHHHHHHHHHh
Confidence 344455555555544432 23566677777777777777777777664
No 298
>2cwy_A Hypothetical protein TTHA0068; structural genomics, conserved hypothetical protein, NPPSFA; 1.85A {Thermus thermophilus} SCOP: a.246.2.1 PDB: 2cxd_A
Probab=77.00 E-value=4.9 Score=19.50 Aligned_cols=56 Identities=11% Similarity=-0.031 Sum_probs=37.7
Q ss_pred HHHHHHHhhcChhhHHHHHHHHhccCCCC----HHHHHHH--HHHHHHhcCCHHHHHHHHHHHHh
Q psy12719 33 LFAQVLVDQEDFDGAEEYFNRSIRVDPEN----ASLYVHR--AMLMLQARGNVDEAIKLIEKAIS 91 (116)
Q Consensus 33 ~~~~~~~~~~~~~~A~~~~~~a~~~~~~~----~~~~~~~--~~~~~~~~~~~~~a~~~~~~~~~ 91 (116)
..|..++..|+|-+|-+.++..-...|.. ...+..+ |..++. .|+. |...+.+++.
T Consensus 6 ~~~~~lfn~g~~~eaHEvlE~~W~~~~~~~~~~~qGLIq~Ava~~h~~-~gn~--a~~ll~~a~~ 67 (94)
T 2cwy_A 6 EEVLGLWRAGRYYEVHEVLEPYWLKATGEERRLLQGVILLAAALHQRR-LGRP--GLRNLRKAEA 67 (94)
T ss_dssp HHHHHHHHTTCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHH-TTCC--CHHHHHHHHH
T ss_pred HHHHHHHhCCChHHHHHHHHHHHhhCCCchHHHHHHHHHHHHHHHHHH-cCcH--HHHHHHHHHH
Confidence 45666778899999999998888777543 1233333 333334 6777 8888888876
No 299
>3lpz_A GET4 (YOR164C homolog); protein targeting, tail-anchored protein biogenesis, GET PAT GET5 binding, protein transport; 1.98A {Chaetomium thermophilum}
Probab=75.98 E-value=11 Score=23.06 Aligned_cols=66 Identities=21% Similarity=0.237 Sum_probs=45.4
Q ss_pred CChhHHHHHHHHHHHhhcChhhHHHHHHHHh----------------ccCCCCHHHHHHHHHHHHHhcCCHHHHHHHHHH
Q psy12719 25 SNVVEACTLFAQVLVDQEDFDGAEEYFNRSI----------------RVDPENASLYVHRAMLMLQARGNVDEAIKLIEK 88 (116)
Q Consensus 25 ~~~~~~~~~~~~~~~~~~~~~~A~~~~~~a~----------------~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~ 88 (116)
-++++.+..+|..+.+.+++.+|..+|--.- ...|.....+..++.+.+-..++...|...+..
T Consensus 133 ~Gdp~LH~~ig~~~~~e~~~~~Ae~H~ilg~~~s~~~~a~mL~ew~~~~~~~e~dlfiaRaVL~yL~l~n~~~A~~~~~~ 212 (336)
T 3lpz_A 133 AGDPELHHVVGTLYVEEGEFEAAEKHLVLGTKESPEVLARMEYEWYKQDESHTAPLYCARAVLPYLLVANVRAANTAYRI 212 (336)
T ss_dssp TCCHHHHHHHHHHHHHTTCHHHHHHHHTTSCTTHHHHHHHHHHHHHHTSCGGGHHHHHHHHHHHHHHTTCHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHccCCHHHHHHHHHhcCCchHHHHHHHHHHHHHhcCCccHHHHHHHHHHHHHHhCCHHHHHHHHHH
Confidence 3568889999999999999999988873110 112334556666666555558999999886655
Q ss_pred HH
Q psy12719 89 AI 90 (116)
Q Consensus 89 ~~ 90 (116)
..
T Consensus 213 f~ 214 (336)
T 3lpz_A 213 FT 214 (336)
T ss_dssp HH
T ss_pred HH
Confidence 44
No 300
>2cfu_A SDSA1; SDS-hydrolase, lactamase, hydrolase; HET: 1DB; 1.9A {Pseudomonas aeruginosa} SCOP: d.106.1.3 d.157.1.13 PDB: 2cfz_A* 2cg2_A 2cg3_A*
Probab=74.01 E-value=12 Score=25.13 Aligned_cols=45 Identities=18% Similarity=0.121 Sum_probs=38.4
Q ss_pred HHHHHHHHHHhhcChhhHHHHHHHHhccCCCCHHHHHHHHHHHHH
Q psy12719 30 ACTLFAQVLVDQEDFDGAEEYFNRSIRVDPENASLYVHRAMLMLQ 74 (116)
Q Consensus 30 ~~~~~~~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~~ 74 (116)
.....|...+..|+|.-|.+..+.++..+|++..+...++.++-+
T Consensus 451 ~~~~~a~~~~~~g~~~wa~~l~~~~~~~~p~~~~a~~l~a~~~~~ 495 (658)
T 2cfu_A 451 RLLEQARASYARGEYRWVVEVVNRLVFAEPDNRAARELQADALEQ 495 (658)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHCCCHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHH
Confidence 345667777889999999999999999999999988888888554
No 301
>3re2_A Predicted protein; menin, multiple endocrine neoplasia 1, tumor suppressor, MIX lineage leukemia, unknown function; 1.95A {Nematostella vectensis}
Probab=73.74 E-value=10 Score=23.76 Aligned_cols=43 Identities=7% Similarity=0.071 Sum_probs=32.0
Q ss_pred HHHHHHHHHhhC-----CChhHHHHHHHHHHHhhcChhhHHHHHHHHh
Q psy12719 13 SLKEFRNFVDTH-----SNVVEACTLFAQVLVDQEDFDGAEEYFNRSI 55 (116)
Q Consensus 13 A~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~A~~~~~~a~ 55 (116)
++.+|.+++... ..+.-.+..+|..+++.+++.+|+..+..+-
T Consensus 276 ~l~L~~~AI~sa~~yY~n~HvYPYtylgGy~yR~~~~reAl~~WA~Aa 323 (472)
T 3re2_A 276 AEELFKEAITVAKREYSDHHIYPYTYLGGYYYRKKKYYEAIASWVDAG 323 (472)
T ss_dssp HHHHHHHHHHHHHHHSTTCCSHHHHHHHHHHHHTTCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhccCCccchhhhhhhhhhcchHHHHHHHHHHHH
Confidence 466677766543 2234567888889999999999999987764
No 302
>3bqo_A Telomeric repeat-binding factor 1; TRF1 TRFH domain dimerization domain TIN2, ADP-ribosylation, alternative splicing, cell cycle, cell division; 2.00A {Homo sapiens} SCOP: a.146.1.1 PDB: 3l82_A 1h6o_A
Probab=73.40 E-value=5 Score=22.61 Aligned_cols=38 Identities=21% Similarity=0.272 Sum_probs=23.2
Q ss_pred HHHHHHhhcChhhHHHHHHHHhccCCCCHHHHHHHHHH
Q psy12719 34 FAQVLVDQEDFDGAEEYFNRSIRVDPENASLYVHRAML 71 (116)
Q Consensus 34 ~~~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~~~~~ 71 (116)
...++.+.|.+++|.+.+++.+..++.+......|..+
T Consensus 123 AV~VCiekg~Fk~A~eiLkr~f~~~~~~~~lr~kL~~I 160 (211)
T 3bqo_A 123 AIAVCMENGNFKEAEEVFERIFGDPNSHMPFKSKLLMI 160 (211)
T ss_dssp HHHHHHHTTCHHHHHHHHHHHC-----CCTTHHHHHHH
T ss_pred HHHHHHHccchHHHHHHHHHHhcCCCCchHHHHHHHHH
Confidence 34467788888888888888887776665555555554
No 303
>2wvi_A Mitotic checkpoint serine/threonine-protein kinase BUB1 beta; tumor suppressor, TPR, apoptosis, cell division, cell cycle, kinetochore, transferase; 1.80A {Homo sapiens} PDB: 3si5_A
Probab=72.47 E-value=9.5 Score=20.69 Aligned_cols=74 Identities=11% Similarity=0.116 Sum_probs=50.2
Q ss_pred HHHHHHHHhhCCCh---------hHHHHHHHHHHHhhcChhhHHHHHHHHhc--cCCCCHHHHHHHHHHHHHhcCCHHHH
Q psy12719 14 LKEFRNFVDTHSNV---------VEACTLFAQVLVDQEDFDGAEEYFNRSIR--VDPENASLYVHRAMLMLQARGNVDEA 82 (116)
Q Consensus 14 ~~~~~~~~~~~~~~---------~~~~~~~~~~~~~~~~~~~A~~~~~~a~~--~~~~~~~~~~~~~~~~~~~~~~~~~a 82 (116)
...+++++....++ ..+|..++... +++..+|..+.. +....+..|...|..+-. .|++.+|
T Consensus 43 ~~lLErc~~~f~~~~~YknD~RyLklWl~ya~~~------~~p~~if~~L~~~~IG~~~AlfY~~wA~~lE~-~~~~~~A 115 (164)
T 2wvi_A 43 STLLERAVEALQGEKRYYSDPRFLNLWLKLGRLC------NEPLDMYSYLHNQGIGVSLAQFYISWAEEYEA-RENFRKA 115 (164)
T ss_dssp HHHHHHHHHHTTTCGGGTTCHHHHHHHHHHHHHC------SCHHHHHHHHHHTTSSTTBHHHHHHHHHHHHH-TTCHHHH
T ss_pred HHHHHHHHHHhhhhhhhccCHHHHHHHHHHHHhc------CCHHHHHHHHHHCCcchhhHHHHHHHHHHHHH-cCCHHHH
Confidence 44566666554322 34566665542 446666666654 455667788888888666 8999999
Q ss_pred HHHHHHHHhcCC
Q psy12719 83 IKLIEKAISIDK 94 (116)
Q Consensus 83 ~~~~~~~~~~~~ 94 (116)
.+.|..+++...
T Consensus 116 ~~Iy~~Gi~~~A 127 (164)
T 2wvi_A 116 DAIFQEGIQQKA 127 (164)
T ss_dssp HHHHHHHHHTTC
T ss_pred HHHHHHHHHcCC
Confidence 999999998753
No 304
>3bqo_A Telomeric repeat-binding factor 1; TRF1 TRFH domain dimerization domain TIN2, ADP-ribosylation, alternative splicing, cell cycle, cell division; 2.00A {Homo sapiens} SCOP: a.146.1.1 PDB: 3l82_A 1h6o_A
Probab=71.66 E-value=2.2 Score=23.99 Aligned_cols=40 Identities=5% Similarity=0.108 Sum_probs=25.2
Q ss_pred cccchhcHHHHHHHHHHHHhhCCChhHHHHHHHHHHHhhc
Q psy12719 3 VPGDRERVEQSLKEFRNFVDTHSNVVEACTLFAQVLVDQE 42 (116)
Q Consensus 3 ~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 42 (116)
++.+.|.+.+|.+.+++....++.+......+..+-....
T Consensus 126 VCiekg~Fk~A~eiLkr~f~~~~~~~~lr~kL~~II~~Kd 165 (211)
T 3bqo_A 126 VCMENGNFKEAEEVFERIFGDPNSHMPFKSKLLMIISQKD 165 (211)
T ss_dssp HHHHTTCHHHHHHHHHHHC-----CCTTHHHHHHHHHTTC
T ss_pred HHHHccchHHHHHHHHHHhcCCCCchHHHHHHHHHHHccC
Confidence 4567899999999999998888777665555555543333
No 305
>3bu8_A Telomeric repeat-binding factor 2; TRF2 TRFH domain TRF2 dimerization domain TIN2 peptide, alternative splicing, cell cycle, chromosomal protein; 2.15A {Homo sapiens} SCOP: a.146.1.1 PDB: 3bua_A* 1h6p_A
Probab=71.65 E-value=12 Score=21.50 Aligned_cols=36 Identities=19% Similarity=0.222 Sum_probs=27.4
Q ss_pred HHhcCCHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHh
Q psy12719 73 LQARGNVDEAIKLIEKAISIDKSCMFAYETLGTIEVQ 109 (116)
Q Consensus 73 ~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~l~~~~~~ 109 (116)
.+ .|.+++|.+.+++.+..+++.......|..+-..
T Consensus 125 ie-k~~f~kA~eiLkr~~~~~~s~~kLr~kL~~II~~ 160 (235)
T 3bu8_A 125 IK-NKEFEKASKILKKHMSKDPTTQKLRNDLLNIIRE 160 (235)
T ss_dssp HH-TTCHHHHHHHHHHHSTTCGGGHHHHHHHHHHHHH
T ss_pred HH-hcchHHHHHHHHHHhcCCCCchHHHHHHHHHHhc
Confidence 55 8999999999999999877776666666655443
No 306
>3u84_A Menin; MLL, JUND, ledgf, TPR, transglutaminase-like, transcription, epigenetics, cancer; 2.50A {Homo sapiens} PDB: 3u85_A 3u86_A 3u88_A*
Probab=71.58 E-value=17 Score=23.31 Aligned_cols=59 Identities=15% Similarity=0.140 Sum_probs=40.5
Q ss_pred hHHHHHHHHhccC-----CCCHHHHHHHHHHHHHhcCCHHHHHHHHHHHHhc------CCCcHHHHHHHHH
Q psy12719 46 GAEEYFNRSIRVD-----PENASLYVHRAMLMLQARGNVDEAIKLIEKAISI------DKSCMFAYETLGT 105 (116)
Q Consensus 46 ~A~~~~~~a~~~~-----~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~------~~~~~~~~~~l~~ 105 (116)
.++..|.+++... -.....|..+|..+++ .+++.+|+..+..+-.. ..++.+.|..+-.
T Consensus 297 ~~~~L~~~AI~sa~~~Y~n~HvYPYtYlgGy~yR-~~~~reAl~~WA~Aa~Vi~~YNY~reDeEIYKEf~e 366 (550)
T 3u84_A 297 DPLTLYHKGIASAKTYYRDEHIYPYMYLAGYHCR-NRNVREALQAWADTATVIQDYNYCREDEEIYKEFFE 366 (550)
T ss_dssp CHHHHHHHHHHHHHHHSTTCCSHHHHHHHHHHHH-TTCHHHHHHHHHHHHHHHTTSCCCGGGHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHHhccCCccceeecchhhhh-cchHHHHHHHHHHHHHHHHHcCCCcchHHHHHHHHH
Confidence 4667777766532 3345677788888888 89999999999887654 3455666655443
No 307
>4a1g_A Mitotic checkpoint serine/threonine-protein kinas; cell cycle, transferase, spindle assembly checkpoint, mitosi repeat, KNL1, KMN network; 2.60A {Homo sapiens} PDB: 2lah_A
Probab=71.54 E-value=9.7 Score=20.38 Aligned_cols=76 Identities=13% Similarity=0.286 Sum_probs=51.6
Q ss_pred HHHHHHHHHhhCCCh---------hHHHHHHHHHHHhhcChhhHHHHHHHHhc--cCCCCHHHHHHHHHHHHHhcCCHHH
Q psy12719 13 SLKEFRNFVDTHSNV---------VEACTLFAQVLVDQEDFDGAEEYFNRSIR--VDPENASLYVHRAMLMLQARGNVDE 81 (116)
Q Consensus 13 A~~~~~~~~~~~~~~---------~~~~~~~~~~~~~~~~~~~A~~~~~~a~~--~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (116)
-...+++++....++ ..+|..++.. .+++...|..+.. +....+..|...|..+.. .|++.+
T Consensus 47 l~~lLErc~~~f~~~~~YknD~RyLklWl~ya~~------~~dp~~if~~L~~~~IG~~~AlfYe~wA~~lE~-~g~~~~ 119 (152)
T 4a1g_A 47 LITLLEHLMKEFLDKKKYHNDPRFISYCLKFAEY------NSDLHQFFEFLYNHGIGTLSSPLYIAWAGHLEA-QGELQH 119 (152)
T ss_dssp HHHHHHHHHHHHTTCGGGTTCHHHHHHHHHHHTT------BSCHHHHHHHHHTTTTTTTBHHHHHHHHHHHHH-TTCHHH
T ss_pred HHHHHHHHHHHhcccccccCCHHHHHHHHHHHHh------cCCHHHHHHHHHHCCCcHHHHHHHHHHHHHHHH-cCCHHH
Confidence 345666666554322 3355555543 2447777777665 445667788888888666 899999
Q ss_pred HHHHHHHHHhcCCC
Q psy12719 82 AIKLIEKAISIDKS 95 (116)
Q Consensus 82 a~~~~~~~~~~~~~ 95 (116)
|.+.++..++....
T Consensus 120 A~~Vy~~Gi~~~A~ 133 (152)
T 4a1g_A 120 ASAVLQRGIQNQAE 133 (152)
T ss_dssp HHHHHHHHHHTTCB
T ss_pred HHHHHHHHHHcCCc
Confidence 99999999987543
No 308
>3lew_A SUSD-like carbohydrate binding protein; structural genomics, center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE 1PE 2PE; 1.70A {Bacteroides vulgatus}
Probab=70.42 E-value=18 Score=23.17 Aligned_cols=27 Identities=7% Similarity=0.277 Sum_probs=18.7
Q ss_pred HHHHHHHHHHhhcChhhHHHHHHHHhc
Q psy12719 30 ACTLFAQVLVDQEDFDGAEEYFNRSIR 56 (116)
Q Consensus 30 ~~~~~~~~~~~~~~~~~A~~~~~~a~~ 56 (116)
++..+|.++...+++++|....++++.
T Consensus 205 A~allArvyL~~~~~~~A~~~a~~vi~ 231 (495)
T 3lew_A 205 VLGILSRACLYARQWEKAKTYSDKLLA 231 (495)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhhhHHHHHHHHHHHHh
Confidence 556667777777777777777776664
No 309
>3u84_A Menin; MLL, JUND, ledgf, TPR, transglutaminase-like, transcription, epigenetics, cancer; 2.50A {Homo sapiens} PDB: 3u85_A 3u86_A 3u88_A*
Probab=69.81 E-value=14 Score=23.71 Aligned_cols=43 Identities=7% Similarity=0.085 Sum_probs=31.3
Q ss_pred HHHHHHHHHhhC-----CChhHHHHHHHHHHHhhcChhhHHHHHHHHh
Q psy12719 13 SLKEFRNFVDTH-----SNVVEACTLFAQVLVDQEDFDGAEEYFNRSI 55 (116)
Q Consensus 13 A~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~A~~~~~~a~ 55 (116)
++.+|.+++... ..+.-.+..+|-.+++.+++.+|+..+..+-
T Consensus 298 ~~~L~~~AI~sa~~~Y~n~HvYPYtYlgGy~yR~~~~reAl~~WA~Aa 345 (550)
T 3u84_A 298 PLTLYHKGIASAKTYYRDEHIYPYMYLAGYHCRNRNVREALQAWADTA 345 (550)
T ss_dssp HHHHHHHHHHHHHHHSTTCCSHHHHHHHHHHHHTTCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhccCCccceeecchhhhhcchHHHHHHHHHHHH
Confidence 356666666543 2234467888889999999999999987764
No 310
>3snx_A SUSD homolog, putative SUSD-like carbohydrate binding protein; alpha-alpha superhelix, structural genomics; HET: MSE; 1.88A {Bacteroides thetaiotaomicron}
Probab=69.60 E-value=6.6 Score=24.93 Aligned_cols=29 Identities=10% Similarity=0.039 Sum_probs=20.9
Q ss_pred HHHHHHHHHHHhhcChhhHHHHHHHHhcc
Q psy12719 29 EACTLFAQVLVDQEDFDGAEEYFNRSIRV 57 (116)
Q Consensus 29 ~~~~~~~~~~~~~~~~~~A~~~~~~a~~~ 57 (116)
-++..++.++...+++++|....+.++..
T Consensus 192 aA~aLlARvyL~~~~~~~A~~~a~~vi~~ 220 (460)
T 3snx_A 192 VVNGLMARAYLLTGQWGEAAKAAEAARKG 220 (460)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHTTT
T ss_pred HHHHHHHHHHHHhcCHHHHHHHHHHHHhc
Confidence 35666777777777888777777777653
No 311
>3jq1_A SUSD superfamily protein; structural genomic center for structural genomics, JCSG, protein structure INI PSI-2, RAGB; HET: MSE; 1.55A {Bacteroides vulgatus atcc 8482}
Probab=69.50 E-value=15 Score=23.48 Aligned_cols=47 Identities=11% Similarity=0.131 Sum_probs=33.6
Q ss_pred HHHHHHHHHHHHhhCCCh--------hHHHHHHHHHHHhhcChhhHHHHHHHHhc
Q psy12719 10 VEQSLKEFRNFVDTHSNV--------VEACTLFAQVLVDQEDFDGAEEYFNRSIR 56 (116)
Q Consensus 10 ~~~A~~~~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~A~~~~~~a~~ 56 (116)
++..+..++.++..-|.. .-++..++.++...+++++|....++++.
T Consensus 154 y~~I~~DL~~A~~~Lp~~~~~gr~tk~aA~allarvyL~~~~~~~A~~~a~~vi~ 208 (481)
T 3jq1_A 154 WAQAKEDLKTAASLLPITNKIGKPTQGAAYAALGKIYVYEENWQEAINVLEPLTQ 208 (481)
T ss_dssp HHHHHHHHHHHHHHSCSSCSTTSCCHHHHHHHHHHHHHHTTCHHHHHHHHGGGGS
T ss_pred HHHHHHHHHHHHHhCCCCCCCCcccHHHHHHHHHHHHHHHhHHHHHHHHHHHHHh
Confidence 444555566666554421 33677889999999999999999988874
No 312
>2p58_C Putative type III secretion protein YSCG; type III secretion system, structure, needle protein, YSCE, YSCF, transport protein/chaperone complex; 1.80A {Yersinia pestis}
Probab=68.26 E-value=9.7 Score=19.08 Aligned_cols=73 Identities=8% Similarity=0.011 Sum_probs=46.2
Q ss_pred HHHHHHHHHHHHhhCCChhHHHHHHHHHHHhhcChhhHHHHHHHHhccCCCCHHHHHHHHHHHHHhcCCHHHHHHHHHHH
Q psy12719 10 VEQSLKEFRNFVDTHSNVVEACTLFAQVLVDQEDFDGAEEYFNRSIRVDPENASLYVHRAMLMLQARGNVDEAIKLIEKA 89 (116)
Q Consensus 10 ~~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~ 89 (116)
.++|..+. ..+...++..-+-......++.+|+|++|....+... . .+...|..+ +-.+ .|-.+++...+.+.
T Consensus 23 HqEA~tIA-dwL~~~~~~E~v~lIR~sSLmNrG~Yq~Al~l~~~~c--~-pdlepw~AL--ce~r-lGl~s~le~rL~~l 95 (116)
T 2p58_C 23 HEEANCIA-EWLHLKGEEEAVQLIRLSSLMNRGDYASALQQGNKLA--Y-PDLEPWLAL--CEYR-LGLGSALESRLNRL 95 (116)
T ss_dssp HHHHHHHH-HHHHHTTCHHHHHHHHHHHHHHTTCHHHHHHHHTTSC--C-GGGHHHHHH--HHHH-HTCHHHHHHHHHHH
T ss_pred HHHHHHHH-HHHHhCCcHHHHHHHHHHHHHcchhHHHHHHhcCCCC--C-chHHHHHHH--HHHh-cccHHHHHHHHHHH
Confidence 45554443 3455556644455666777889999999998886544 2 233344444 4456 78888888777444
No 313
>1wfd_A Hypothetical protein 1500032H18; MIT domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Mus musculus} SCOP: a.7.14.1
Probab=68.23 E-value=8.7 Score=18.54 Aligned_cols=17 Identities=12% Similarity=0.221 Sum_probs=8.8
Q ss_pred HhhcChhhHHHHHHHHh
Q psy12719 39 VDQEDFDGAEEYFNRSI 55 (116)
Q Consensus 39 ~~~~~~~~A~~~~~~a~ 55 (116)
-..|++++|+.+|..++
T Consensus 26 D~~g~y~eAl~~Y~~Ai 42 (93)
T 1wfd_A 26 DAESRYQQALVCYQEGI 42 (93)
T ss_dssp HHTTCHHHHHHHHHHHH
T ss_pred HHhCCHHHHHHHHHHHH
Confidence 34555555555555443
No 314
>2wvi_A Mitotic checkpoint serine/threonine-protein kinase BUB1 beta; tumor suppressor, TPR, apoptosis, cell division, cell cycle, kinetochore, transferase; 1.80A {Homo sapiens} PDB: 3si5_A
Probab=67.08 E-value=13 Score=20.16 Aligned_cols=51 Identities=16% Similarity=0.270 Sum_probs=38.0
Q ss_pred HHHHHHHHHhhC--CChhHHHHHHHHHHHhhcChhhHHHHHHHHhccCCCCHH
Q psy12719 13 SLKEFRNFVDTH--SNVVEACTLFAQVLVDQEDFDGAEEYFNRSIRVDPENAS 63 (116)
Q Consensus 13 A~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~A~~~~~~a~~~~~~~~~ 63 (116)
+.++|....... ...+..|...|..+...|++.+|.++|+.++........
T Consensus 79 p~~if~~L~~~~IG~~~AlfY~~wA~~lE~~~~~~~A~~Iy~~Gi~~~A~P~~ 131 (164)
T 2wvi_A 79 PLDMYSYLHNQGIGVSLAQFYISWAEEYEARENFRKADAIFQEGIQQKAEPLE 131 (164)
T ss_dssp HHHHHHHHHHTTSSTTBHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTTCBSHH
T ss_pred HHHHHHHHHHCCcchhhHHHHHHHHHHHHHcCCHHHHHHHHHHHHHcCCCcHH
Confidence 444555554433 455678888999999999999999999999988755433
No 315
>2cpt_A SKD1 protein, vacuolar sorting protein 4B; MIT, helix bundle, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: a.7.14.1
Probab=64.87 E-value=12 Score=18.97 Aligned_cols=16 Identities=6% Similarity=0.430 Sum_probs=8.8
Q ss_pred hhcChhhHHHHHHHHh
Q psy12719 40 DQEDFDGAEEYFNRSI 55 (116)
Q Consensus 40 ~~~~~~~A~~~~~~a~ 55 (116)
..+++++|+.+|..++
T Consensus 30 ~ag~y~eAl~lY~~Ai 45 (117)
T 2cpt_A 30 KAGNYEEALQLYQHAV 45 (117)
T ss_dssp HHTCHHHHHHHHHHHH
T ss_pred HccCHHHHHHHHHHHH
Confidence 4555665555555544
No 316
>2uwj_G Type III export protein PSCG; virulence, chaperones, coiled coil, needle formation, type III secretion, bacterial pathogenicity; 2.0A {Pseudomonas aeruginosa}
Probab=64.80 E-value=12 Score=18.77 Aligned_cols=73 Identities=11% Similarity=0.028 Sum_probs=45.7
Q ss_pred HHHHHHHHHHHHhhCCChhHHHHHHHHHHHhhcChhhHHHHHHHHhccCCCCHHHHHHHHHHHHHhcCCHHHHHHHHHHH
Q psy12719 10 VEQSLKEFRNFVDTHSNVVEACTLFAQVLVDQEDFDGAEEYFNRSIRVDPENASLYVHRAMLMLQARGNVDEAIKLIEKA 89 (116)
Q Consensus 10 ~~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~ 89 (116)
.++|..+. ..+...++..-+-......++.+|+|++|....+... . .+...|. +.+-.+ .|-.+++...+.+.
T Consensus 22 HqEA~tIA-dwL~~~~~~E~v~lIR~sSLmNrG~Yq~Al~l~~~~c--~-pdlepw~--ALce~r-lGl~s~le~rL~~l 94 (115)
T 2uwj_G 22 HEEALCIA-EWLERLGQDEAARLIRISSLANQGRYQEALAFAHGNP--W-PALEPWF--ALCEWH-LGLGAALDRRLAGL 94 (115)
T ss_dssp HHHHHHHH-HHHHHTTCHHHHHHHHHHHHHHTTCHHHHHGGGTTCC--C-GGGHHHH--HHHHHH-TTCHHHHHHHHHHH
T ss_pred HHHHHHHH-HHHHhCCcHHHHHHHHHHHHHcchhHHHHHHhcCCCC--C-chHHHHH--HHHHHh-cccHHHHHHHHHHH
Confidence 45554443 3455556644455666677889999999987765443 2 2333444 444456 89988888887444
No 317
>4b4t_O 26S proteasome regulatory subunit RPN9; hydrolase, AAA-atpases, protein degradation, ubiquitin-prote pathway; 7.40A {Saccharomyces cerevisiae}
Probab=64.51 E-value=23 Score=22.03 Aligned_cols=85 Identities=8% Similarity=0.086 Sum_probs=53.9
Q ss_pred hhcHHHHHHHHHHHHhhC-----------------CChhHHHHHHHHHHHhhcChhhHHHHHHHHhcc-------CCCCH
Q psy12719 7 RERVEQSLKEFRNFVDTH-----------------SNVVEACTLFAQVLVDQEDFDGAEEYFNRSIRV-------DPENA 62 (116)
Q Consensus 7 ~~~~~~A~~~~~~~~~~~-----------------~~~~~~~~~~~~~~~~~~~~~~A~~~~~~a~~~-------~~~~~ 62 (116)
..+.+++++.+++..... .....+...++..+...++.++|...++++-.. +|..-
T Consensus 89 ~~d~~~al~~L~~~~~~~~~~~~~~~~~~~~~~~~ea~l~i~~~i~~~yl~~~d~~~a~~~l~~~~~~l~~~~~~~~~v~ 168 (393)
T 4b4t_O 89 SKDFDESLKYLDDLKAQFQELDSKKQRNNGSKDHGDGILLIDSEIARTYLLKNDLVKARDLLDDLEKTLDKKDSIPLRIT 168 (393)
T ss_dssp TTCHHHHHHHHHHHTTTSHHHHSSCCCCCCSSSSCCSHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHSCCSSSHHH
T ss_pred cCCHHHHHHHHHHHHHHHhhhhhhhhcccchhhhhhhHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHhhhccCCccHHHH
Confidence 456788888887653321 011335667888899999999999999887532 22222
Q ss_pred HHHHHHHHHHHHhcCCHHHHHHHHHHHHh
Q psy12719 63 SLYVHRAMLMLQARGNVDEAIKLIEKAIS 91 (116)
Q Consensus 63 ~~~~~~~~~~~~~~~~~~~a~~~~~~~~~ 91 (116)
..++.....+++..+++..+....-..+.
T Consensus 169 ~~~y~~~~~~~~~~~~~a~~y~~~l~~l~ 197 (393)
T 4b4t_O 169 NSFYSTNSQYFKFKNDFNSFYYTSLLYLS 197 (393)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhhhHHHHHHHHHHHHh
Confidence 23344334445558888888777666664
No 318
>3myv_A SUSD superfamily protein; RAGB, SUSD and hypothetical proteins, structural genomics, J center for structural genomics, JCSG; HET: MSE; 1.80A {Bacteroides vulgatus}
Probab=64.50 E-value=24 Score=22.32 Aligned_cols=30 Identities=17% Similarity=0.108 Sum_probs=25.8
Q ss_pred HHHHHHHHHHHHHhcCCHHHHHHHHHHHHhc
Q psy12719 62 ASLYVHRAMLMLQARGNVDEAIKLIEKAISI 92 (116)
Q Consensus 62 ~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~ 92 (116)
..++..++.+++. .+++++|....++++..
T Consensus 190 ~aa~allarvyL~-~~~~~~A~~~a~~vi~~ 219 (454)
T 3myv_A 190 YAARALLARIYLY-HDDNRKAFDLADQLIKD 219 (454)
T ss_dssp HHHHHHHHHHHHH-TTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHh-cccHHHHHHHHHHHHhC
Confidence 4578889999888 89999999999998853
No 319
>3lvg_A Clathrin heavy chain 1; SELF assembly, coated PIT, cytoplasmic vesicle, membrane, Ca structural protein; 7.94A {Bos taurus} PDB: 3lvh_A
Probab=63.20 E-value=0.13 Score=33.32 Aligned_cols=95 Identities=17% Similarity=0.150 Sum_probs=53.2
Q ss_pred ccchhcHHHHHHHHHHHHhhCCChhHHHHHHHHHHHhhcChhhHHHHHHHHhccCCCCHHHHHHHHHHHHHhcCCHHHHH
Q psy12719 4 PGDRERVEQSLKEFRNFVDTHSNVVEACTLFAQVLVDQEDFDGAEEYFNRSIRVDPENASLYVHRAMLMLQARGNVDEAI 83 (116)
Q Consensus 4 ~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~a~ 83 (116)
+...|+|+.|++...++ +++.+|......+...+++.-|..+--..+-....-.. +... +...|-+++-+
T Consensus 180 LV~L~~yq~AVdaArKA-----ns~ktWKeV~~ACvd~~EfrLAqicGLniIvhadeL~e----lv~~-YE~~G~f~ELI 249 (624)
T 3lvg_A 180 LVHLGEYQAAVDGARKA-----NSTRTWKEVCFACVDGKEFRLAQMCGLHIVVHADELEE----LINY-YQDRGYFEELI 249 (624)
T ss_dssp SSSCSGGGSSTTTTTTC-----CSSCSHHHHTHHHHHSCTTTTTTHHHHHHHCCSSCCSG----GGSS-SSTTCCCTTST
T ss_pred HHHHHHHHHHHHHHHhc-----CChhHHHHHHHHHhCchHHHHHHHhcchhcccHHHHHH----HHHH-HHhCCCHHHHH
Confidence 34556666666555443 55667777777777777777776665554432211111 1111 22356666666
Q ss_pred HHHHHHHhcCCCcHHHHHHHHHHHH
Q psy12719 84 KLIEKAISIDKSCMFAYETLGTIEV 108 (116)
Q Consensus 84 ~~~~~~~~~~~~~~~~~~~l~~~~~ 108 (116)
..++.++.+.....-....||.+|.
T Consensus 250 sLlEaglglErAHmGmFTELaILYs 274 (624)
T 3lvg_A 250 TMLEAALGLERAHMGMFTELAILYS 274 (624)
T ss_dssp TTHHHHTTSTTCCHHHHHHHHHHHH
T ss_pred HHHHHHhCCCchhHHHHHHHHHHHH
Confidence 6666666655555555566666554
No 320
>4gq4_A Menin; tumor suppressor, nucleus, transcription-transcription inhib complex; HET: 0RT EPE PE4; 1.27A {Homo sapiens} PDB: 4gq3_A* 4gpq_A* 4gq6_A*
Probab=62.65 E-value=23 Score=22.69 Aligned_cols=42 Identities=7% Similarity=0.084 Sum_probs=24.7
Q ss_pred HHHHHHHHhhC-----CChhHHHHHHHHHHHhhcChhhHHHHHHHHh
Q psy12719 14 LKEFRNFVDTH-----SNVVEACTLFAQVLVDQEDFDGAEEYFNRSI 55 (116)
Q Consensus 14 ~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~A~~~~~~a~ 55 (116)
+..|.+++... ..+.-.+..+|-.+.+.+++.+|+..+..+-
T Consensus 284 ~~Lf~~AI~~ar~~Y~~~hvYPYtYlgG~~~R~~~~~eAl~~wa~aa 330 (489)
T 4gq4_A 284 LTLYHKGIASAKTYYRDEHIYPYMYLAGYHCRNRNVREALQAWADTA 330 (489)
T ss_dssp HHHHHHHHHHHHHHSTTCCSHHHHHHHHHHHHTTCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhcccCcccceeecchHHHHhhhHHHHHHHhhhhh
Confidence 44555555432 2223455666777777777777777776653
No 321
>3kez_A Putative sugar binding protein; structural genomics, joint C structural genomics, JCSG, protein structure initiative; 1.90A {Bacteroides vulgatus atcc 8482}
Probab=61.30 E-value=28 Score=22.06 Aligned_cols=30 Identities=23% Similarity=0.267 Sum_probs=25.7
Q ss_pred HHHHHHHHHHHHHhcCCHHHHHHHHHHHHhc
Q psy12719 62 ASLYVHRAMLMLQARGNVDEAIKLIEKAISI 92 (116)
Q Consensus 62 ~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~ 92 (116)
..++..++.+++. .+++++|....++++..
T Consensus 196 ~aa~allArvyL~-~~~~~~A~~~a~~vi~~ 225 (461)
T 3kez_A 196 WAAMTLLSRVYLY-KGEYNEALTMAENAIKG 225 (461)
T ss_dssp HHHHHHHHHHHHH-HTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHH-hCCHHHHHHHHHHHHhc
Confidence 5578889999888 79999999999998863
No 322
>2v6x_A Vacuolar protein sorting-associated protein 4; protein transport, vacuole, endosome, transport, ESCRT-III, VPS2, VPS4, SKD1, VPS4B, VPS4A; 1.98A {Saccharomyces cerevisiae}
Probab=60.45 E-value=12 Score=17.53 Aligned_cols=18 Identities=6% Similarity=0.169 Sum_probs=10.8
Q ss_pred HhhcChhhHHHHHHHHhc
Q psy12719 39 VDQEDFDGAEEYFNRSIR 56 (116)
Q Consensus 39 ~~~~~~~~A~~~~~~a~~ 56 (116)
-..|++++|+.+|..++.
T Consensus 24 D~~g~y~eAl~~Y~~aie 41 (85)
T 2v6x_A 24 DTATQYEEAYTAYYNGLD 41 (85)
T ss_dssp HHTTCHHHHHHHHHHHHH
T ss_pred HHcCCHHHHHHHHHHHHH
Confidence 455666666666665553
No 323
>3qnk_A Putative lipoprotein; alpha-alpha superhelix, structural genomics, joint center FO structural genomics, JCSG, protein structure initiative; 2.70A {Bacteroides fragilis}
Probab=60.19 E-value=32 Score=22.24 Aligned_cols=27 Identities=11% Similarity=0.151 Sum_probs=15.2
Q ss_pred HHHHHHHHHHhhcChhhHHHHHHHHhc
Q psy12719 30 ACTLFAQVLVDQEDFDGAEEYFNRSIR 56 (116)
Q Consensus 30 ~~~~~~~~~~~~~~~~~A~~~~~~a~~ 56 (116)
++..++.++...+++++|....++++.
T Consensus 184 A~allarv~L~~~~~~~A~~~a~~vi~ 210 (517)
T 3qnk_A 184 AYALKSRVELYDKRYEDVIKSCAEVYK 210 (517)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 445555555555566666555555553
No 324
>2yhe_A SEC-alkyl sulfatase; hydrolase, inversion, metallo-beta-lactamase fold; 2.70A {Pseudomonas SP}
Probab=64.50 E-value=1.8 Score=28.89 Aligned_cols=49 Identities=12% Similarity=0.059 Sum_probs=39.5
Q ss_pred HHHHHHHHHHhcCCHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHhhcccc
Q psy12719 65 YVHRAMLMLQARGNVDEAIKLIEKAISIDKSCMFAYETLGTIEVQRTFVV 114 (116)
Q Consensus 65 ~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~ 114 (116)
....+...+. .|+|.-|.+.+..++..+|++..+...++.++.++|...
T Consensus 464 ~~~~a~~~~~-~g~~~wa~~l~~~~~~a~p~~~~ar~l~a~~~~~l~~~~ 512 (668)
T 2yhe_A 464 VLKQMRAAID-KGDYRWAVQLGNHLVFADPANKDARALQADAMEQLGYQT 512 (668)
Confidence 3445555555 799999999999999999999999999999888877543
No 325
>2npu_A FKBP12-rapamycin complex-associated protein; four-helix bundle, transferase; NMR {Homo sapiens}
Probab=59.86 E-value=16 Score=18.85 Aligned_cols=74 Identities=9% Similarity=0.067 Sum_probs=44.5
Q ss_pred HHHHHHHhhcChhhHHHHHHHH---hccCCCCHHHHHHHHHHHHHhcCCHHHHHHHHHHHHhcCCC--cHHHHHHHHHHH
Q psy12719 33 LFAQVLVDQEDFDGAEEYFNRS---IRVDPENASLYVHRAMLMLQARGNVDEAIKLIEKAISIDKS--CMFAYETLGTIE 107 (116)
Q Consensus 33 ~~~~~~~~~~~~~~A~~~~~~a---~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~--~~~~~~~l~~~~ 107 (116)
.-..+++..++.+..+..+... +...|.... ..+..... ..+..+|.+.+++....... ...+|..+-.++
T Consensus 45 eASrlyf~~~n~~~m~~~L~pLh~~l~~~PeT~~---E~sF~~~f-G~~L~~A~~~~~~y~~t~d~~~lnqAWd~Y~~Vf 120 (126)
T 2npu_A 45 EASRLYFGERNVKGMFEVLEPLHAMMERGPQTLK---ETSFNQAY-GRDLMEAQEWCRKYMKSGNVKDLTQAWDLYYHVF 120 (126)
T ss_dssp HHHHHHHHTTCHHHHHHHHHHHHHHHHHSCCCHH---HHHHHHHH-HHHHHHHHHHHHHHHHTCCHHHHHHHHHHHHHHH
T ss_pred HHHHHHhcccCHHHHHHHHHHHHHHHccCCCCHH---HHHHHHHH-hHHHHHHHHHHHHHHHhCChhHHHHHHHHHHHHH
Confidence 3455677888999988888666 444565432 33332222 35567788888877644322 235677777776
Q ss_pred Hhh
Q psy12719 108 VQR 110 (116)
Q Consensus 108 ~~~ 110 (116)
.+.
T Consensus 121 ~rI 123 (126)
T 2npu_A 121 RRI 123 (126)
T ss_dssp HHH
T ss_pred HHH
Confidence 554
No 326
>3mcx_A SUSD superfamily protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE GOL; 1.49A {Bacteroides thetaiotaomicron}
Probab=59.39 E-value=31 Score=21.94 Aligned_cols=44 Identities=9% Similarity=0.014 Sum_probs=32.6
Q ss_pred HHHHHHHhccCCCC--------HHHHHHHHHHHHHhcCCHHHHHHHHHHHHhc
Q psy12719 48 EEYFNRSIRVDPEN--------ASLYVHRAMLMLQARGNVDEAIKLIEKAISI 92 (116)
Q Consensus 48 ~~~~~~a~~~~~~~--------~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~ 92 (116)
+..++.|+..-|.. ..++..++.+++. .+++++|....++++..
T Consensus 180 ~~DL~~A~~~L~~~~~~gr~tk~aa~allarvyL~-~~~~~~A~~~a~~vi~~ 231 (477)
T 3mcx_A 180 VSDMSNALSGLRQETSNGYINYWAAQALLSRVYLN-MGEYQKAYDAATDVIKN 231 (477)
T ss_dssp HHHHHHHGGGSCSSCCTTSCCHHHHHHHHHHHHHH-TTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHhCcccccCCcCcHHHHHHHHHHHHHH-hcCHHHHHHHHHHHHhC
Confidence 44455555544432 4578889999888 89999999999999864
No 327
>2dl1_A Spartin; SPG20, MIT, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=58.08 E-value=16 Score=18.62 Aligned_cols=16 Identities=6% Similarity=0.023 Sum_probs=8.6
Q ss_pred cHHHHHHHHHHHHhhC
Q psy12719 9 RVEQSLKEFRNFVDTH 24 (116)
Q Consensus 9 ~~~~A~~~~~~~~~~~ 24 (116)
.+.+|..+..+++..+
T Consensus 18 ~h~~AF~~Is~AL~~D 33 (116)
T 2dl1_A 18 AYKKAFLFVNKGLNTD 33 (116)
T ss_dssp HHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhhhh
Confidence 3455555555555543
No 328
>2e2a_A Protein (enzyme IIA); helical bundles, PTS, transferase, phosphotransferase system; 2.10A {Lactococcus lactis} SCOP: a.7.2.1 PDB: 1e2a_A
Probab=55.59 E-value=18 Score=18.01 Aligned_cols=31 Identities=16% Similarity=0.081 Sum_probs=22.8
Q ss_pred CChhHHHHHHHHHHHhhcChhhHHHHHHHHh
Q psy12719 25 SNVVEACTLFAQVLVDQEDFDGAEEYFNRSI 55 (116)
Q Consensus 25 ~~~~~~~~~~~~~~~~~~~~~~A~~~~~~a~ 55 (116)
.++++....-+.-..+.|+|++|.+.+..+-
T Consensus 17 aG~ArS~~~eAl~~Ak~g~fe~A~~~l~eA~ 47 (105)
T 2e2a_A 17 AGDARSKLLEALKAAENGDFAKADSLVVEAG 47 (105)
T ss_dssp HHHHHHHHHHHHHHHHTTCHHHHHHHHHHHH
T ss_pred HhHHHHHHHHHHHHHHhCCHHHHHHHHHHHH
Confidence 3556666666777778899999888887754
No 329
>2wpv_A GET4, UPF0363 protein YOR164C; golgi-ER trafficking, tail-anchored protein, protein binding GET4; 1.99A {Saccharomyces cerevisiae} PDB: 3lku_A
Probab=54.44 E-value=33 Score=20.74 Aligned_cols=21 Identities=19% Similarity=0.238 Sum_probs=15.8
Q ss_pred CcHHHHHHHHHHHHhhccccc
Q psy12719 95 SCMFAYETLGTIEVQRTFVVL 115 (116)
Q Consensus 95 ~~~~~~~~l~~~~~~~~~~~~ 115 (116)
++|..+..+|..+...|++.+
T Consensus 132 Gdp~LH~~~a~~~~~e~~~~~ 152 (312)
T 2wpv_A 132 GDPYLHNTIGSKLLEGDFVYE 152 (312)
T ss_dssp CCHHHHHHHHHHHHHTTCHHH
T ss_pred CCHHHHHHHHHHHhhcCCHHH
Confidence 467788888888887777654
No 330
>3lew_A SUSD-like carbohydrate binding protein; structural genomics, center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE 1PE 2PE; 1.70A {Bacteroides vulgatus}
Probab=54.40 E-value=40 Score=21.66 Aligned_cols=30 Identities=10% Similarity=-0.017 Sum_probs=26.2
Q ss_pred HHHHHHHHHHHHHhcCCHHHHHHHHHHHHhc
Q psy12719 62 ASLYVHRAMLMLQARGNVDEAIKLIEKAISI 92 (116)
Q Consensus 62 ~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~ 92 (116)
..++..++.+++. .+++++|....++++..
T Consensus 203 ~aA~allArvyL~-~~~~~~A~~~a~~vi~~ 232 (495)
T 3lew_A 203 EVVLGILSRACLY-ARQWEKAKTYSDKLLAK 232 (495)
T ss_dssp HHHHHHHHHHHHH-TTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHH-hhhHHHHHHHHHHHHhc
Confidence 4578889999888 89999999999999864
No 331
>1wcr_A PTS system, N, N'-diacetylchitobiose-specific IIA component; mutagenesis, transferase, sugar transport, phosphotransferase; NMR {Escherichia coli} PDB: 2wy2_A 2wwv_A
Probab=54.12 E-value=19 Score=17.85 Aligned_cols=30 Identities=20% Similarity=0.199 Sum_probs=21.2
Q ss_pred ChhHHHHHHHHHHHhhcChhhHHHHHHHHh
Q psy12719 26 NVVEACTLFAQVLVDQEDFDGAEEYFNRSI 55 (116)
Q Consensus 26 ~~~~~~~~~~~~~~~~~~~~~A~~~~~~a~ 55 (116)
++++....-+.-..+.|+|++|.+.+.++-
T Consensus 16 G~Ars~~~eAl~~Ak~g~fe~A~~~l~eA~ 45 (103)
T 1wcr_A 16 GQARSLAYAALKQAKQGDFAAAKAMMDQSR 45 (103)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHhCCHHHHHHHHHHHH
Confidence 445556666666778888888888877653
No 332
>3ph0_C ASCG; type III secretion system, chapero; 2.40A {Aeromonas hydrophila}
Probab=53.75 E-value=14 Score=16.19 Aligned_cols=8 Identities=25% Similarity=0.655 Sum_probs=0.5
Q ss_pred cCCHHHHH
Q psy12719 76 RGNVDEAI 83 (116)
Q Consensus 76 ~~~~~~a~ 83 (116)
.|+|++|.
T Consensus 53 rG~Yq~Al 60 (61)
T 3ph0_C 53 QGDYQRAL 60 (61)
T ss_dssp C-------
T ss_pred cchHhHhh
Confidence 56665553
No 333
>4gq4_A Menin; tumor suppressor, nucleus, transcription-transcription inhib complex; HET: 0RT EPE PE4; 1.27A {Homo sapiens} PDB: 4gq3_A* 4gpq_A* 4gq6_A*
Probab=51.47 E-value=46 Score=21.44 Aligned_cols=78 Identities=14% Similarity=0.065 Sum_probs=50.6
Q ss_pred hHHHHHHHHHHHh--hcChhhHHHHHHHHhccC-----CCCHHHHHHHHHHHHHhcCCHHHHHHHHHHHHhc------CC
Q psy12719 28 VEACTLFAQVLVD--QEDFDGAEEYFNRSIRVD-----PENASLYVHRAMLMLQARGNVDEAIKLIEKAISI------DK 94 (116)
Q Consensus 28 ~~~~~~~~~~~~~--~~~~~~A~~~~~~a~~~~-----~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~------~~ 94 (116)
+.++.++|.+-.- ......+...|++++... ......|..+|..+++ .+++.+|+..+..+-.. ..
T Consensus 262 PmALgnLgDLEei~pt~grp~~~~Lf~~AI~~ar~~Y~~~hvYPYtYlgG~~~R-~~~~~eAl~~wa~aa~Vi~~YnY~r 340 (489)
T 4gq4_A 262 PMALGNLADLEELEPTPGRPDPLTLYHKGIASAKTYYRDEHIYPYMYLAGYHCR-NRNVREALQAWADTATVIQDYNYCR 340 (489)
T ss_dssp HHHHHHHHHHHHHSCCTTSCCHHHHHHHHHHHHHHHSTTCCSHHHHHHHHHHHH-TTCHHHHHHHHHHHHHHHTTSCCCT
T ss_pred chhhhcccCHhhcCCCCCCCCHHHHHHHHHHHHHHhcccCcccceeecchHHHH-hhhHHHHHHHhhhhhhhhhhccccc
Confidence 4566666665432 222345677888887642 3345677788888788 89999999999888654 44
Q ss_pred CcHHHHHHHHHH
Q psy12719 95 SCMFAYETLGTI 106 (116)
Q Consensus 95 ~~~~~~~~l~~~ 106 (116)
++.+.+..+-.+
T Consensus 341 eDeEiYke~~eI 352 (489)
T 4gq4_A 341 EDEEIYKEFFEV 352 (489)
T ss_dssp TCHHHHHHHHHH
T ss_pred chHHHHHHHHHH
Confidence 556666554433
No 334
>3fap_B FRAP, FKBP12-rapamycin associated protein; complex, gene therapy, cell cycle; HET: ARD; 1.85A {Homo sapiens} SCOP: a.24.7.1 PDB: 2fap_B* 2rse_B 1nsg_B* 4fap_B* 1aue_A 2gaq_A 1fap_B*
Probab=50.03 E-value=22 Score=17.31 Aligned_cols=72 Identities=10% Similarity=0.083 Sum_probs=39.3
Q ss_pred HHHHHHhhcChhhHHHHHHHHhcc---CCCCHHHHHHHHHHHHHhcCCHHHHHHHHHHHHhcCCC--cHHHHHHHHHHHH
Q psy12719 34 FAQVLVDQEDFDGAEEYFNRSIRV---DPENASLYVHRAMLMLQARGNVDEAIKLIEKAISIDKS--CMFAYETLGTIEV 108 (116)
Q Consensus 34 ~~~~~~~~~~~~~A~~~~~~a~~~---~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~--~~~~~~~l~~~~~ 108 (116)
-+..++..++.+.....+...... .|.... ..+..... -.+..+|.+.+++....... -..+|...-.++.
T Consensus 16 Asr~~f~~~n~~~m~~~L~pLh~~l~~~peT~~---E~sF~~~f-G~~L~~A~~~~~~y~~t~~~~~l~qAWdiY~~V~~ 91 (94)
T 3fap_B 16 ASRLYFGERNVKGMFEVLEPLHAMMERGPQTLK---ETSFNQAY-GRDLMEAQEWCRKYMKSGNVKDLTQAWDLYYHVFR 91 (94)
T ss_dssp HHHHHHTTCCHHHHHHHHHHHHHHHHHCCCSHH---HHHHHHHH-HHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHH
T ss_pred HHHHHhccCCHHHHHHHHHHHHHHHcCCCCCHH---HHHHHHHH-HHHHHHHHHHHHHHHHhCChhhHHHHHHHHHHHHh
Confidence 345677788888888777766543 455432 22222222 24556677777666554321 1345666555554
Q ss_pred h
Q psy12719 109 Q 109 (116)
Q Consensus 109 ~ 109 (116)
+
T Consensus 92 r 92 (94)
T 3fap_B 92 R 92 (94)
T ss_dssp H
T ss_pred c
Confidence 3
No 335
>3k1s_A PTS system, cellobiose-specific IIA component; all alpha protein, spectrin repeat-like, transferase, structural genomics; HET: MSE; 2.30A {Bacillus anthracis} SCOP: a.7.2.0
Probab=49.10 E-value=25 Score=17.67 Aligned_cols=29 Identities=14% Similarity=0.152 Sum_probs=20.1
Q ss_pred ChhHHHHHHHHHHHhhcChhhHHHHHHHH
Q psy12719 26 NVVEACTLFAQVLVDQEDFDGAEEYFNRS 54 (116)
Q Consensus 26 ~~~~~~~~~~~~~~~~~~~~~A~~~~~~a 54 (116)
++++....-+.-..+.|+|++|.+.+..+
T Consensus 20 G~Ars~~~eAl~~Ak~gdfe~A~~~l~eA 48 (109)
T 3k1s_A 20 GNARSFAMEALQFAKQGKMAEADEAMVKA 48 (109)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHcCCHHHHHHHHHHH
Confidence 44555555666666788888888877765
No 336
>3hdx_A SUSD homolog, SUSD superfamily protein; NP_809182.1, structural genomics, joint center for structural genomics, JCSG; HET: MSE; 1.50A {Bacteroides thetaiotaomicron vpi-5482}
Probab=47.64 E-value=52 Score=20.99 Aligned_cols=28 Identities=25% Similarity=0.272 Sum_probs=22.4
Q ss_pred HHHHHHHHHHhhcChhhHHHHHHHHhcc
Q psy12719 30 ACTLFAQVLVDQEDFDGAEEYFNRSIRV 57 (116)
Q Consensus 30 ~~~~~~~~~~~~~~~~~A~~~~~~a~~~ 57 (116)
++..++.++...+++++|....++++..
T Consensus 199 A~allarvyL~~~~~~~A~~~a~~vi~~ 226 (478)
T 3hdx_A 199 AYSVLAHICAWQGNYAEAETYSAFIIDH 226 (478)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhhHHHHHHHHHHHHhC
Confidence 6677888888888888888888887743
No 337
>3l8r_A PTCA, putative PTS system, cellobiose-specific IIA component; helix; 2.50A {Streptococcus mutans} SCOP: a.7.2.0
Probab=46.28 E-value=30 Score=17.76 Aligned_cols=30 Identities=10% Similarity=-0.010 Sum_probs=21.3
Q ss_pred ChhHHHHHHHHHHHhhcChhhHHHHHHHHh
Q psy12719 26 NVVEACTLFAQVLVDQEDFDGAEEYFNRSI 55 (116)
Q Consensus 26 ~~~~~~~~~~~~~~~~~~~~~A~~~~~~a~ 55 (116)
++++....-+.-..+.|+|++|.+.+..+-
T Consensus 35 G~ARS~~~eAl~~Ak~gdfe~A~~~l~eA~ 64 (120)
T 3l8r_A 35 GNARSIVHEAFDAMREKNYILAEQKLQEAN 64 (120)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHcCCHHHHHHHHHHHH
Confidence 455566666666678888888888877653
No 338
>2ynq_A ESSB; membrane protein, secretion, type V, secretion system; 2.40A {Geobacillus thermodenitrificans}
Probab=44.94 E-value=37 Score=18.44 Aligned_cols=75 Identities=11% Similarity=0.142 Sum_probs=39.4
Q ss_pred hcHHHHHHHHHHHHhhCCCh--hHHHHHHHHHHHhhcChh-hHHHHHHHHhccCCCCHHHHHHHHHHHHHhcCCHHHHHH
Q psy12719 8 ERVEQSLKEFRNFVDTHSNV--VEACTLFAQVLVDQEDFD-GAEEYFNRSIRVDPENASLYVHRAMLMLQARGNVDEAIK 84 (116)
Q Consensus 8 ~~~~~A~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~-~A~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ 84 (116)
.+|...+..++. .+|+. ....+.+|..|.....+. +..+....-+.+..+. -+.+=+++.. .|++++|+.
T Consensus 22 ~dYs~VI~~L~~---~~~~~Lp~~~kY~LA~SYI~~e~Ls~eQKenIln~itlkSde---~yL~YWIyiG-Rg~~~eAlD 94 (161)
T 2ynq_A 22 NKYSDVITTLED---YAPEDMPYVIQYELASSYVMTESLTEEQRQTVSNNITLKTDE---QYMLYWIYIG-RSQSEEALE 94 (161)
T ss_dssp TCHHHHHHHHTT---SCGGGSCHHHHHHHHHHHHHTSSSCHHHHHHHHHTCCTTSCH---HHHHHHHHHH-HTCHHHHHH
T ss_pred hhHHHHHHHHhc---CChhhCChhHHHHHHHHHHHccCCCHHHHHHHHhhCCccCCH---HHHHHHHHHc-CCchHHHHH
Confidence 344444444433 33443 346778888888776665 3334443333332221 1222334455 699999987
Q ss_pred HHHHH
Q psy12719 85 LIEKA 89 (116)
Q Consensus 85 ~~~~~ 89 (116)
.....
T Consensus 95 iA~~L 99 (161)
T 2ynq_A 95 LARTI 99 (161)
T ss_dssp HHHHH
T ss_pred HHHhc
Confidence 76544
No 339
>3jq1_A SUSD superfamily protein; structural genomic center for structural genomics, JCSG, protein structure INI PSI-2, RAGB; HET: MSE; 1.55A {Bacteroides vulgatus atcc 8482}
Probab=44.77 E-value=60 Score=20.81 Aligned_cols=29 Identities=21% Similarity=0.296 Sum_probs=24.6
Q ss_pred HHHHHHHHHHHHHhcCCHHHHHHHHHHHHh
Q psy12719 62 ASLYVHRAMLMLQARGNVDEAIKLIEKAIS 91 (116)
Q Consensus 62 ~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~ 91 (116)
..++..++.+++. .+++++|....++++.
T Consensus 180 ~aA~allarvyL~-~~~~~~A~~~a~~vi~ 208 (481)
T 3jq1_A 180 GAAYAALGKIYVY-EENWQEAINVLEPLTQ 208 (481)
T ss_dssp HHHHHHHHHHHHH-TTCHHHHHHHHGGGGS
T ss_pred HHHHHHHHHHHHH-HhHHHHHHHHHHHHHh
Confidence 4578889999888 8999999999988874
No 340
>3hdx_A SUSD homolog, SUSD superfamily protein; NP_809182.1, structural genomics, joint center for structural genomics, JCSG; HET: MSE; 1.50A {Bacteroides thetaiotaomicron vpi-5482}
Probab=42.74 E-value=53 Score=20.95 Aligned_cols=30 Identities=27% Similarity=0.133 Sum_probs=25.9
Q ss_pred HHHHHHHHHHHHHhcCCHHHHHHHHHHHHhc
Q psy12719 62 ASLYVHRAMLMLQARGNVDEAIKLIEKAISI 92 (116)
Q Consensus 62 ~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~ 92 (116)
..++..++.+++. .+++++|....++++..
T Consensus 197 ~aA~allarvyL~-~~~~~~A~~~a~~vi~~ 226 (478)
T 3hdx_A 197 LSAYSVLAHICAW-QGNYAEAETYSAFIIDH 226 (478)
T ss_dssp HHHHHHHHHHHHH-TTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHH-HhhHHHHHHHHHHHHhC
Confidence 4578889999888 89999999999999864
No 341
>2xze_A STAM-binding protein; hydrolase-protein transport complex; 1.75A {Homo sapiens}
Probab=42.65 E-value=38 Score=17.92 Aligned_cols=26 Identities=15% Similarity=0.258 Sum_probs=21.1
Q ss_pred HHHHHHHHHHhhcChhhHHHHHHHHh
Q psy12719 30 ACTLFAQVLVDQEDFDGAEEYFNRSI 55 (116)
Q Consensus 30 ~~~~~~~~~~~~~~~~~A~~~~~~a~ 55 (116)
.....|..|...|+.+.|...|.+.+
T Consensus 42 ~llr~A~~y~~egd~e~AYily~R~~ 67 (146)
T 2xze_A 42 EIIRMASIYSEEGNIEHAFILYNKYI 67 (146)
T ss_dssp HHHHHHHHHHHHTCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHCCCHHHHHHHHHHHH
Confidence 45567888889999999998887753
No 342
>3snx_A SUSD homolog, putative SUSD-like carbohydrate binding protein; alpha-alpha superhelix, structural genomics; HET: MSE; 1.88A {Bacteroides thetaiotaomicron}
Probab=41.89 E-value=47 Score=21.15 Aligned_cols=30 Identities=27% Similarity=0.044 Sum_probs=26.4
Q ss_pred HHHHHHHHHHHHHhcCCHHHHHHHHHHHHhc
Q psy12719 62 ASLYVHRAMLMLQARGNVDEAIKLIEKAISI 92 (116)
Q Consensus 62 ~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~ 92 (116)
..++..++.+++. .+++++|....++++..
T Consensus 191 ~aA~aLlARvyL~-~~~~~~A~~~a~~vi~~ 220 (460)
T 3snx_A 191 DVVNGLMARAYLL-TGQWGEAAKAAEAARKG 220 (460)
T ss_dssp HHHHHHHHHHHHH-TTCHHHHHHHHHHHTTT
T ss_pred HHHHHHHHHHHHH-hcCHHHHHHHHHHHHhc
Confidence 5678889999888 89999999999999864
No 343
>3eab_A Spastin; spastin, MIT, ESCRT, alternative splicing, ATP- binding, cytoplasm, disease mutation, hereditary spastic paraplegia, nucleotide-binding; 2.50A {Homo sapiens}
Probab=41.76 E-value=29 Score=16.73 Aligned_cols=13 Identities=15% Similarity=0.404 Sum_probs=5.8
Q ss_pred cChhhHHHHHHHH
Q psy12719 42 EDFDGAEEYFNRS 54 (116)
Q Consensus 42 ~~~~~A~~~~~~a 54 (116)
|+-++|+.+|++.
T Consensus 33 G~k~~A~~~YkkG 45 (89)
T 3eab_A 33 GQKEQAVEWYKKG 45 (89)
T ss_dssp SSGGGSHHHHHHH
T ss_pred CCHHHHHHHHHHH
Confidence 4444444444443
No 344
>3l22_A SUSD superfamily protein; structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE; 2.05A {Bacteroides fragilis}
Probab=40.22 E-value=34 Score=21.58 Aligned_cols=26 Identities=19% Similarity=0.070 Sum_probs=22.5
Q ss_pred HHHHHHHHHHhhcChhhHHHHHHHHh
Q psy12719 30 ACTLFAQVLVDQEDFDGAEEYFNRSI 55 (116)
Q Consensus 30 ~~~~~~~~~~~~~~~~~A~~~~~~a~ 55 (116)
++..++.++...+++++|....++++
T Consensus 203 A~allarvyL~~~~~~~A~~~a~~vi 228 (441)
T 3l22_A 203 ANMLKMRVYMAMNEWDKAITAGELVT 228 (441)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHTCC
T ss_pred HHHHHHHHHHHHhhHHHHHHHHHHHh
Confidence 67778889999999999999998876
No 345
>3i4g_A SUSD-like carbohydrate binding protein BF1063; structural genomics, center for structural genomics, JCSG; HET: MSE EPE; 1.35A {Bacteroides fragilis nctc 9343}
Probab=39.32 E-value=78 Score=20.62 Aligned_cols=26 Identities=15% Similarity=0.319 Sum_probs=12.7
Q ss_pred HHHHHHHHHHhhcChhhHHHHHHHHh
Q psy12719 30 ACTLFAQVLVDQEDFDGAEEYFNRSI 55 (116)
Q Consensus 30 ~~~~~~~~~~~~~~~~~A~~~~~~a~ 55 (116)
++..++.++...+++++|....+.++
T Consensus 200 A~allarv~L~~~~~~~A~~~a~~vi 225 (528)
T 3i4g_A 200 ALAFLGRTCMLQKDWKSGAKAFHDIM 225 (528)
T ss_dssp HHHHHHHHHHHHTCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhHHHHHHHHHHHHH
Confidence 34444444444555555555554444
No 346
>3qnk_A Putative lipoprotein; alpha-alpha superhelix, structural genomics, joint center FO structural genomics, JCSG, protein structure initiative; 2.70A {Bacteroides fragilis}
Probab=37.77 E-value=82 Score=20.39 Aligned_cols=30 Identities=13% Similarity=0.240 Sum_probs=26.0
Q ss_pred HHHHHHHHHHHHHhcCCHHHHHHHHHHHHhc
Q psy12719 62 ASLYVHRAMLMLQARGNVDEAIKLIEKAISI 92 (116)
Q Consensus 62 ~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~ 92 (116)
..++..++.+++. .+++++|....++++..
T Consensus 182 ~aA~allarv~L~-~~~~~~A~~~a~~vi~~ 211 (517)
T 3qnk_A 182 GAAYALKSRVELY-DKRYEDVIKSCAEVYKL 211 (517)
T ss_dssp HHHHHHHHHHHHH-TTCHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHH-HHHHHHHHHHHHHHHHh
Confidence 4578889999888 89999999999999864
No 347
>4abx_A DNA repair protein RECN; DNA binding protein, ATP binding protein, double break repair, coiled-coil; HET: DNA; 2.04A {Deinococcus radiodurans}
Probab=36.96 E-value=51 Score=17.83 Aligned_cols=27 Identities=15% Similarity=0.171 Sum_probs=10.4
Q ss_pred HHHHHHHhhcChhhHHHHHHHHhccCC
Q psy12719 33 LFAQVLVDQEDFDGAEEYFNRSIRVDP 59 (116)
Q Consensus 33 ~~~~~~~~~~~~~~A~~~~~~a~~~~~ 59 (116)
.+..++....+....+..|...+..+|
T Consensus 95 ~l~~a~~~l~d~~~~L~~y~~~le~DP 121 (175)
T 4abx_A 95 ELRAALESVQAIAGELRDVAEGSAADP 121 (175)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHTCCCCH
T ss_pred HHHHHHHHHHHHHHHHHHHHHcCCCCH
Confidence 333333333333333333333333444
No 348
>3s6n_M SurviVal motor neuron protein; SMN complex, SMN-gemin2 complex, U-rich snRNA, SM fold, SM C SNRNPS, snRNP biogenesis, PRE-mRNA splicing; 2.50A {Homo sapiens} PDB: 2leh_B
Probab=35.35 E-value=25 Score=13.66 Aligned_cols=14 Identities=21% Similarity=0.313 Sum_probs=8.3
Q ss_pred HHHHHHHHHHHHhc
Q psy12719 79 VDEAIKLIEKAISI 92 (116)
Q Consensus 79 ~~~a~~~~~~~~~~ 92 (116)
|++|+..|+.++..
T Consensus 18 yDKAVaSfk~alk~ 31 (37)
T 3s6n_M 18 YDKAVASFKHALKN 31 (37)
T ss_pred HHHHHHHHHHHHhc
Confidence 56666666665543
No 349
>2yhe_A SEC-alkyl sulfatase; hydrolase, inversion, metallo-beta-lactamase fold; 2.70A {Pseudomonas SP}
Probab=41.54 E-value=7.9 Score=26.02 Aligned_cols=43 Identities=23% Similarity=0.175 Sum_probs=31.5
Q ss_pred HHHHHHHHhhcChhhHHHHHHHHhccCCCCHHHHHHHHHHHHH
Q psy12719 32 TLFAQVLVDQEDFDGAEEYFNRSIRVDPENASLYVHRAMLMLQ 74 (116)
Q Consensus 32 ~~~~~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~~ 74 (116)
...+...+..|+|.-|.+..+.++..+|++..+...++.++-+
T Consensus 465 ~~~a~~~~~~g~~~wa~~l~~~~~~a~p~~~~ar~l~a~~~~~ 507 (668)
T 2yhe_A 465 LKQMRAAIDKGDYRWAVQLGNHLVFADPANKDARALQADAMEQ 507 (668)
Confidence 3455666677888888888888888888887777766666443
No 350
>3qtm_A Uncharacterized protein C4B3.07; tetratricopeptide repeat, enhancer of translation terminatio translation; HET: CME; 2.15A {Schizosaccharomyces pombe} PDB: 3qtn_B
Probab=32.81 E-value=83 Score=19.00 Aligned_cols=31 Identities=13% Similarity=0.137 Sum_probs=21.4
Q ss_pred HHHHHHHHHHHHhcCCCcHHHHHHHHHHHHh
Q psy12719 79 VDEAIKLIEKAISIDKSCMFAYETLGTIEVQ 109 (116)
Q Consensus 79 ~~~a~~~~~~~~~~~~~~~~~~~~l~~~~~~ 109 (116)
++.|++-.+-.++..|+++......+.+..+
T Consensus 101 FDaALERielGLe~~p~s~~L~la~SKILlq 131 (346)
T 3qtm_A 101 IDAAIERAQLGLDAPGNESRLFLALARAYLE 131 (346)
T ss_dssp HHHHHHHHHHGGGSSSCCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHhhhhhCCCChhHHHHHHHHHHH
Confidence 5666666677777788887777776666544
No 351
>3jys_A SUSD superfamily protein; structural genomic center for structural genomics, JCSG, protein structure INI PSI-2, RAGB; HET: MSE; 2.00A {Bacteroides vulgatus atcc 8482}
Probab=32.61 E-value=1e+02 Score=19.94 Aligned_cols=47 Identities=13% Similarity=0.162 Sum_probs=27.5
Q ss_pred HHHHHHHHHHHHhhCCCh---------hHHHHHHHHHHH------hhcChhhHHHHHHHHhc
Q psy12719 10 VEQSLKEFRNFVDTHSNV---------VEACTLFAQVLV------DQEDFDGAEEYFNRSIR 56 (116)
Q Consensus 10 ~~~A~~~~~~~~~~~~~~---------~~~~~~~~~~~~------~~~~~~~A~~~~~~a~~ 56 (116)
++.-+..++.++..-|.. .-++..++.++. ..+++++|....++++.
T Consensus 161 y~~I~~DL~~A~~~Lp~~~~~~gr~tk~aA~allarvyL~~~~y~~~~~~~~A~~~a~~vi~ 222 (499)
T 3jys_A 161 FNWIEAELNEIKPNLPSPRSEYGVADQAVASALLARMYLNAEIYTGKARYTECINACNEVIK 222 (499)
T ss_dssp HHHHHHHHHHHGGGSCCTTSSTTSCCHHHHHHHHHHHHHTHHHHHSSCCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhCCCCCCCCCCcCHHHHHHHHHHHHHhhhhccChhHHHHHHHHHHHHHh
Confidence 344455555555544421 225556666665 46778888888877763
No 352
>3mv2_A Coatomer subunit alpha; vesicular membrane coat COAT protein complex I, protein TRAN; 2.90A {Saccharomyces cerevisiae} PDB: 3mv3_A
Probab=31.81 E-value=91 Score=19.16 Aligned_cols=94 Identities=11% Similarity=0.012 Sum_probs=50.0
Q ss_pred cchhcHHHHHHHHHHHHhhCC----Ch----hHH--------HHHHHHHHH-hhc-----ChhhHH--HHHHHHhccCCC
Q psy12719 5 GDRERVEQSLKEFRNFVDTHS----NV----VEA--------CTLFAQVLV-DQE-----DFDGAE--EYFNRSIRVDPE 60 (116)
Q Consensus 5 ~~~~~~~~A~~~~~~~~~~~~----~~----~~~--------~~~~~~~~~-~~~-----~~~~A~--~~~~~a~~~~~~ 60 (116)
...|++++|+..|..++..-| ++ .++ .+.+|.... .+. +..... ..|-...++.|.
T Consensus 125 ~t~gKf~eAl~~Fr~iL~~i~l~~v~~~~e~~e~~eli~icrEYilal~iEl~Rr~l~~~~~kR~lELAAYFT~c~LQp~ 204 (325)
T 3mv2_A 125 FKLNKPDIAIECFREAIYRITLLMVDDAEDEKLAHKILETAREYILGLSIELERRSLKEGNTVRMLELAAYFTKAKLSPI 204 (325)
T ss_dssp HHTTCHHHHHHHHHHHHHHHHTCCBCSSHHHHHHHHHHHHHHHHHHHHHHHHHHHTCCTTCHHHHHHHHHHGGGSCCCHH
T ss_pred HhcCCHHHHHHHHHHHHHHhheeeeccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCcccHHHHHHHHHHhccCCCcHH
Confidence 356899999999999886542 11 111 112222111 011 111111 112222334444
Q ss_pred CHHHHHHHHHHHHHhcCCHHHHHHHHHHHHhcCCCcHH
Q psy12719 61 NASLYVHRAMLMLQARGNVDEAIKLIEKAISIDKSCMF 98 (116)
Q Consensus 61 ~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~ 98 (116)
....-...|.....+.++|..|....++.++..|....
T Consensus 205 H~~LaLr~AM~~a~K~KNy~tAa~fArrLLel~p~~~~ 242 (325)
T 3mv2_A 205 HRTNALQVAMSQHFKHKNFLQASYFAGEFLKIISSGPR 242 (325)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHTTCCSSHH
T ss_pred HHHHHHHHHHHHHHHhhhHHHHHHHHHHHHhcCCCHHH
Confidence 43333333333333389999999999999999986543
No 353
>2wb7_A PT26-6P; extra chromosomal elements, unknown function; 2.60A {Thermococcus SP}
Probab=31.51 E-value=1.1e+02 Score=20.16 Aligned_cols=16 Identities=6% Similarity=0.306 Sum_probs=10.5
Q ss_pred hcChhhHHHHHHHHhc
Q psy12719 41 QEDFDGAEEYFNRSIR 56 (116)
Q Consensus 41 ~~~~~~A~~~~~~a~~ 56 (116)
...|++|+.+++++-.
T Consensus 452 i~~Y~~Ai~~L~k~~~ 467 (526)
T 2wb7_A 452 IDEYKAAINDLQKAAQ 467 (526)
T ss_dssp HHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHhhhc
Confidence 4456777777777653
No 354
>4gof_A Small glutamine-rich tetratricopeptide repeat-CON protein alpha; four-helix bundle, protein-protein interaction, UBL4A ubiqui domain; 1.35A {Homo sapiens} PDB: 4goe_A 4god_A
Probab=30.08 E-value=39 Score=14.43 Aligned_cols=19 Identities=21% Similarity=0.328 Sum_probs=13.2
Q ss_pred CHHHHHHHHHHHHhcCCCc
Q psy12719 78 NVDEAIKLIEKAISIDKSC 96 (116)
Q Consensus 78 ~~~~a~~~~~~~~~~~~~~ 96 (116)
..+-|++++..++..+|++
T Consensus 29 SleVAiqCi~~aF~v~~~d 47 (52)
T 4gof_A 29 SLEVAIQCLETAFGVTVED 47 (52)
T ss_dssp HHHHHHHHHHHHHTCCSSC
T ss_pred HHHHHHHHHHHHcCCCccc
Confidence 3566777777777777765
No 355
>2vkj_A TM1634; membrane protein, TPR motif joint center for structural GENO JCSG, structural genomics; 1.65A {Thermotoga maritima} PDB: 2vko_A*
Probab=29.77 E-value=54 Score=15.92 Aligned_cols=27 Identities=22% Similarity=0.411 Sum_probs=14.1
Q ss_pred HHHHHHHHHHhcCCHHHHHHHHHHHHhc
Q psy12719 65 YVHRAMLMLQARGNVDEAIKLIEKAISI 92 (116)
Q Consensus 65 ~~~~~~~~~~~~~~~~~a~~~~~~~~~~ 92 (116)
...-|.-+++ .++|.+|...++++...
T Consensus 56 ~i~eak~~y~-~~ny~ea~~l~~k~~n~ 82 (106)
T 2vkj_A 56 LIAEGKDLFE-TANYGEALVFFEKALNL 82 (106)
T ss_dssp HHHHHHHHHH-TTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHH-hcchhHHHHHHHHHHcc
Confidence 3344444444 56666666666555533
No 356
>2oc5_A Hypothetical protein; DUF3066 family protein, structural genomics, joint center FO structural genomics, JCSG; HET: UNL; 1.68A {Prochlorococcus marinus} SCOP: a.25.1.6
Probab=28.94 E-value=84 Score=17.85 Aligned_cols=55 Identities=13% Similarity=0.116 Sum_probs=35.7
Q ss_pred hhHHHHHHHHhccCCCCHHHHHHHHHHHHHhcCCHHHHHHHHHHHHhcCCCcHHHHHHH
Q psy12719 45 DGAEEYFNRSIRVDPENASLYVHRAMLMLQARGNVDEAIKLIEKAISIDKSCMFAYETL 103 (116)
Q Consensus 45 ~~A~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~l 103 (116)
++|...|.+.-.+-|+...-+..++.+- ++..++...+-+-+...|+-+.+....
T Consensus 47 qeA~dNyi~la~llP~~~dEL~rLakME----~rH~kgF~aCGrNL~V~pDm~fA~~fF 101 (244)
T 2oc5_A 47 QEAHDNYIAIGTLLPDHVEELKRLAKME----MRHKKGFTACGKNLGVEADMDFAREFF 101 (244)
T ss_dssp HHHHHHHHHHHHHCGGGHHHHHHHHHHH----HHHHHHHHHHHHHTTCCCCHHHHHHHH
T ss_pred HHHHHhHHHHHHHCcccHHHHHHHHHHH----HHHHhHHHHhccCCcCCCCcHHHHHHH
Confidence 4677777777778888888777777763 334555566666666666655444333
No 357
>2a9u_A Ubiquitin carboxyl-terminal hydrolase 8; coil-COIL, protease, SH3-binding, thiol protease, UBL conjugation pathway, structural genomics; 2.10A {Homo sapiens} SCOP: a.118.23.1
Probab=27.66 E-value=75 Score=16.84 Aligned_cols=35 Identities=9% Similarity=-0.030 Sum_probs=24.7
Q ss_pred HHHHHHHHHHhhcChhhHHHHHHHHhc---cCCCCHHH
Q psy12719 30 ACTLFAQVLVDQEDFDGAEEYFNRSIR---VDPENASL 64 (116)
Q Consensus 30 ~~~~~~~~~~~~~~~~~A~~~~~~a~~---~~~~~~~~ 64 (116)
-.+..|..|...|+.+.|.-.|.+-+. .-|..+..
T Consensus 44 ~L~r~A~~y~~EGd~E~AYilymRy~~L~~kIpkHpdy 81 (144)
T 2a9u_A 44 KIFKTAEECRLDRDEERAYVLYMKYVTVYNLIKKRPDF 81 (144)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHTTSHHH
T ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHhcCcch
Confidence 345668888899999999988877533 34555543
No 358
>3otn_A SUSD superfamily protein; putative outer membrane protein, carbohydrate binding, structural genomics; HET: MSE; 1.95A {Parabacteroides distasonis}
Probab=27.66 E-value=1.2e+02 Score=19.37 Aligned_cols=27 Identities=15% Similarity=0.159 Sum_probs=14.6
Q ss_pred HHHHHHHHHHhhc---------ChhhHHHHHHHHhc
Q psy12719 30 ACTLFAQVLVDQE---------DFDGAEEYFNRSIR 56 (116)
Q Consensus 30 ~~~~~~~~~~~~~---------~~~~A~~~~~~a~~ 56 (116)
++..++.++...+ ++++|....++++.
T Consensus 190 A~allarvyL~~~~~~~~~~~~~~~~A~~~a~~vi~ 225 (482)
T 3otn_A 190 VKALLADVYLTYAGYPLQGGKSYYAESAKRSLEVIK 225 (482)
T ss_dssp HHHHHHHHHHHHHSTTTCCCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhCCCcccCcHHHHHHHHHHHHHHHc
Confidence 4445555555544 55555555555543
No 359
>3msv_A Nuclear import adaptor, NRO1; helix repeats, heat repeats, protein binding; 2.18A {Schizosaccharomyces pombe}
Probab=27.28 E-value=1.1e+02 Score=18.77 Aligned_cols=31 Identities=13% Similarity=0.137 Sum_probs=24.2
Q ss_pred HHHHHHHHHHHHhcCCCcHHHHHHHHHHHHh
Q psy12719 79 VDEAIKLIEKAISIDKSCMFAYETLGTIEVQ 109 (116)
Q Consensus 79 ~~~a~~~~~~~~~~~~~~~~~~~~l~~~~~~ 109 (116)
++.|++-.+-.++..|+++.....++.+..+
T Consensus 148 FDaALERielGLe~~p~s~~L~la~sKIllq 178 (393)
T 3msv_A 148 IDAAIERAQLGLDAPGNESRLFLALARAYLE 178 (393)
T ss_dssp HHHHHHHHHHHTTSCSCCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHhhhhhCCCChhHHHHHHHHHHH
Confidence 6777777888888899988887777777654
No 360
>3o10_A Sacsin; all-helical domain, homodimerization, chaperone; 1.90A {Homo sapiens}
Probab=25.06 E-value=81 Score=16.39 Aligned_cols=14 Identities=7% Similarity=-0.047 Sum_probs=9.2
Q ss_pred hcHHHHHHHHHHHH
Q psy12719 8 ERVEQSLKEFRNFV 21 (116)
Q Consensus 8 ~~~~~A~~~~~~~~ 21 (116)
++.+++..++.++.
T Consensus 4 ~~~ee~~~wl~~A~ 17 (141)
T 3o10_A 4 GNPVEARRWLRQAR 17 (141)
T ss_dssp CCHHHHHHHHHHHH
T ss_pred CChHHHHHHHHHHH
Confidence 45667777776664
No 361
>3ckc_A SUSD; TPR repeat, carbohydrate binding, starch binding, sugar BIND protein; HET: MES; 1.50A {Bacteroides thetaiotaomicron} SCOP: a.118.8.6 PDB: 3ck8_A* 3ck9_A* 3ckb_A* 3ck7_A*
Probab=25.03 E-value=1.4e+02 Score=19.17 Aligned_cols=46 Identities=20% Similarity=0.248 Sum_probs=28.5
Q ss_pred HHHHHHHHHHHhhCCC----------hhHHHHHHHHHHHhh------cChhhHHHHHHHHhc
Q psy12719 11 EQSLKEFRNFVDTHSN----------VVEACTLFAQVLVDQ------EDFDGAEEYFNRSIR 56 (116)
Q Consensus 11 ~~A~~~~~~~~~~~~~----------~~~~~~~~~~~~~~~------~~~~~A~~~~~~a~~ 56 (116)
+..++.++.++..-|. ..-++..+|.++... +++++|....++++.
T Consensus 170 ~~I~~DL~~A~~~Lp~~~~~~~gr~tk~aA~allArvyL~~~~~~~~~~~~~A~~~a~~vi~ 231 (527)
T 3ckc_A 170 TYIQNELNEIEADMYEPRQAPFGRADKAANWLLRARLYLNAGVYTGQTDYAKAEEYASKVIG 231 (527)
T ss_dssp HHHHHHHHHHGGGSCCTTCSCTTSCCHHHHHHHHHHHHHTHHHHHSSCCHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHhCccCCCCCCCcHHHHHHHHHHHHHHHhhhhccCchhHHHHHHHHHHHHh
Confidence 3445555555554442 123566677777654 788888888888774
No 362
>3mkr_B Coatomer subunit alpha; tetratricopeptide repeats (TPR), beta-hairpin, alpha-solenoi transport protein; 2.60A {Bos taurus}
Probab=23.73 E-value=1.3e+02 Score=18.41 Aligned_cols=93 Identities=11% Similarity=0.175 Sum_probs=51.3
Q ss_pred cchhcHHHHHHHHHHHHhhCCC----h----hHH--------HHHHHHHHH-hhcCh-----hhHHH-----HHHHHhcc
Q psy12719 5 GDRERVEQSLKEFRNFVDTHSN----V----VEA--------CTLFAQVLV-DQEDF-----DGAEE-----YFNRSIRV 57 (116)
Q Consensus 5 ~~~~~~~~A~~~~~~~~~~~~~----~----~~~--------~~~~~~~~~-~~~~~-----~~A~~-----~~~~a~~~ 57 (116)
...|++++|+..|..++..-|- + .++ .+.+|.... .+.+. ++... .|-...++
T Consensus 113 ~t~gKf~eAl~~Fr~iL~~i~l~~v~~~~e~~e~~eli~icreYilal~iEl~Rr~l~~~~~~~~kR~lELAAYFT~c~L 192 (320)
T 3mkr_B 113 TTVGKFEEAVEKFRSILLSVPLLVVDNKQEIAEAQQLITICREYIVGLSMETERKKLPKETLEQQKRICEMAAYFTHSNL 192 (320)
T ss_dssp HHTTCHHHHHHHHHHHHHHGGGCCCCSHHHHHHHHHHHHHHHHHHHHHHHHHHHTTSCCCSHHHHHHHHHHHHHHTTSCC
T ss_pred HhcCCHHHHHHHHHHHHHHhhheeeccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccCCchhHHHHHHHHHHhccCCC
Confidence 3568999999999999876541 1 111 122222211 11211 22121 22223344
Q ss_pred CCCCHHHHHHHHHHHHHhcCCHHHHHHHHHHHHhcCCCcH
Q psy12719 58 DPENASLYVHRAMLMLQARGNVDEAIKLIEKAISIDKSCM 97 (116)
Q Consensus 58 ~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~ 97 (116)
.|.+...-...|.....+.++|..|....++.++..|...
T Consensus 193 qp~H~~LaLr~AM~~a~K~KNy~tAa~fArrLLel~p~~~ 232 (320)
T 3mkr_B 193 QPVHMILVLRTALNLFFKLKNFRTAAAFARRLLELGPKPE 232 (320)
T ss_dssp CHHHHHHHHHHHHHHHHHTTBHHHHHHHHHHHHHTCCCHH
T ss_pred cHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHhcCCCHH
Confidence 4444333333333333338999999999999999988644
No 363
>4aez_C MAD3, mitotic spindle checkpoint component MAD3; cell cycle, KEN-BOX, D-BOX, APC/C; 2.30A {Schizosaccharomyces pombe}
Probab=22.42 E-value=1.2e+02 Score=17.46 Aligned_cols=73 Identities=14% Similarity=0.174 Sum_probs=49.0
Q ss_pred HHHHHHHhhCCCh---------hHHHHHHHHHHHhhcChhhHHHHHHHHhc--cCCCCHHHHHHHHHHHHHhcCCHHHHH
Q psy12719 15 KEFRNFVDTHSNV---------VEACTLFAQVLVDQEDFDGAEEYFNRSIR--VDPENASLYVHRAMLMLQARGNVDEAI 83 (116)
Q Consensus 15 ~~~~~~~~~~~~~---------~~~~~~~~~~~~~~~~~~~A~~~~~~a~~--~~~~~~~~~~~~~~~~~~~~~~~~~a~ 83 (116)
..+++++....++ ..+|..++.. .+++...|..+.. +....+..|...|..+.. .|++.+|.
T Consensus 98 ~lLErc~~~F~~~~rYknD~RyLklWl~Ya~~------~~~p~~if~~L~~~~IG~~~AlfYe~wA~~lE~-~g~~~~A~ 170 (223)
T 4aez_C 98 TLLERCTREFVRNPLYKDDVRYLRIWMQYVNY------IDEPVELFSFLAHHHIGQESSIFYEEYANYFES-RGLFQKAD 170 (223)
T ss_dssp HHHHHHHHHTTTCGGGTTCHHHHHHHHHHHTT------CSCHHHHHHHHHHTTCSTTBHHHHHHHHHHHHH-TTCHHHHH
T ss_pred HHHHHHHHHhcccccccCCHHHHHHHHHHHHc------cCCHHHHHHHHHHCCcchhHHHHHHHHHHHHHH-cCCHHHHH
Confidence 4556665554332 2345555542 2466677766654 445667778888888666 89999999
Q ss_pred HHHHHHHhcCC
Q psy12719 84 KLIEKAISIDK 94 (116)
Q Consensus 84 ~~~~~~~~~~~ 94 (116)
+.|+..++...
T Consensus 171 ~Vy~~Gi~~~A 181 (223)
T 4aez_C 171 EVYQKGKRMKA 181 (223)
T ss_dssp HHHHHHHHHTC
T ss_pred HHHHHHHHcCC
Confidence 99999998753
No 364
>3lxu_X Tripeptidyl-peptidase 2; spindle complex, aminopeptidase, hydrolase, phosphoprotein, protease; 3.14A {Drosophila melanogaster}
Probab=21.49 E-value=2.7e+02 Score=21.20 Aligned_cols=36 Identities=19% Similarity=0.189 Sum_probs=26.9
Q ss_pred hcCCHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHhhc
Q psy12719 75 ARGNVDEAIKLIEKAISIDKSCMFAYETLGTIEVQRT 111 (116)
Q Consensus 75 ~~~~~~~a~~~~~~~~~~~~~~~~~~~~l~~~~~~~~ 111 (116)
..++|..|.+.+.+.++..|.. +.+..++.++..+|
T Consensus 1296 ~~~~~g~~~k~l~k~~~~k~~~-~~~~~~~~~~~~l~ 1331 (1354)
T 3lxu_X 1296 AHGHYGRMYKYVVKLIEEKRTR-DHFVELAAINGALG 1331 (1354)
T ss_dssp HHTCHHHHHHHHHHHHHHTCCH-HHHHHHHHHHHHHS
T ss_pred HHHHHHHHHHHHHHHHhccccH-HHHHHHHHHHHHcC
Confidence 3799999999999999888754 45566666655443
No 365
>3lpz_A GET4 (YOR164C homolog); protein targeting, tail-anchored protein biogenesis, GET PAT GET5 binding, protein transport; 1.98A {Chaetomium thermophilum}
Probab=21.17 E-value=1.6e+02 Score=18.23 Aligned_cols=24 Identities=21% Similarity=0.252 Sum_probs=14.6
Q ss_pred HHHHHHHHHHHHHhcCCHHHHHHHH
Q psy12719 62 ASLYVHRAMLMLQARGNVDEAIKLI 86 (116)
Q Consensus 62 ~~~~~~~~~~~~~~~~~~~~a~~~~ 86 (116)
+..+..+|..+++ .+++.+|...+
T Consensus 136 p~LH~~ig~~~~~-e~~~~~Ae~H~ 159 (336)
T 3lpz_A 136 PELHHVVGTLYVE-EGEFEAAEKHL 159 (336)
T ss_dssp HHHHHHHHHHHHH-TTCHHHHHHHH
T ss_pred HHHHHHHHHHHHc-cCCHHHHHHHH
Confidence 4455566666665 56666666665
No 366
>2ymb_A MITD1, MIT domain-containing protein 1; protein transport, membrane, PLD; 3.40A {Homo sapiens}
Probab=21.15 E-value=20 Score=21.06 Aligned_cols=16 Identities=25% Similarity=0.353 Sum_probs=0.0
Q ss_pred hhcHHHHHHHHHHHHh
Q psy12719 7 RERVEQSLKEFRNFVD 22 (116)
Q Consensus 7 ~~~~~~A~~~~~~~~~ 22 (116)
.|+|++|+..|..+++
T Consensus 36 ~g~y~eAl~lY~eaIe 51 (257)
T 2ymb_A 36 ESRYPQALVCYQEGID 51 (257)
T ss_dssp ----------------
T ss_pred cCCHHHHHHHHHHHHH
Confidence 3444444444444443
No 367
>2lxb_A Small glutamine-rich tetratricopeptide repeat-CON protein 2; four-helix bundle, protein-protein interaction, GET5 binding GET pathway; NMR {Saccharomyces cerevisiae} PDB: 2lxc_B
Probab=20.70 E-value=79 Score=14.66 Aligned_cols=21 Identities=14% Similarity=0.351 Sum_probs=16.7
Q ss_pred CHHHHHHHHHHHHhcCCCcHH
Q psy12719 78 NVDEAIKLIEKAISIDKSCMF 98 (116)
Q Consensus 78 ~~~~a~~~~~~~~~~~~~~~~ 98 (116)
..+-|++++..+...+|++..
T Consensus 34 SLeVAiqCI~~aF~v~~~d~~ 54 (74)
T 2lxb_A 34 SLNVAMDCISEAFGFEREAVS 54 (74)
T ss_dssp HHHHHHHHHHHHHTCCTTTHH
T ss_pred HHHHHHHHHHHHhCCCchhhH
Confidence 467788888889888888754
Done!