Query psy12724
Match_columns 167
No_of_seqs 183 out of 1427
Neff 8.1
Searched_HMMs 29240
Date Fri Aug 16 18:04:28 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy12724.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/12724hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2v44_A NCAM2, neural cell adhe 99.9 6.1E-21 2.1E-25 140.8 14.3 131 12-155 4-177 (189)
2 1epf_A NCAM, protein (neural c 99.9 6.7E-21 2.3E-25 140.5 14.1 134 12-156 4-182 (191)
3 4fa8_A Secreted protein BARF1; 99.8 1.3E-20 4.4E-25 143.5 11.9 128 18-152 1-189 (203)
4 3rbs_A Myomesin-1; immunoglobu 99.8 3.8E-20 1.3E-24 140.9 13.2 127 9-152 2-194 (207)
5 2iep_A Muscle-specific kinase 99.8 7.8E-20 2.7E-24 134.7 13.1 127 11-152 8-176 (192)
6 2yd6_A PTPRD protein; hydrolas 99.8 1.7E-19 5.9E-24 135.9 14.2 142 9-162 5-204 (212)
7 2a38_A Titin; Z1Z2, structural 99.8 1.1E-19 3.9E-24 134.0 12.2 128 10-152 5-182 (194)
8 2j8h_A Titin, connectin; cardi 99.8 1.4E-19 4.7E-24 134.0 12.4 128 10-152 4-184 (197)
9 3kld_A Contactin 4, axcam, BIG 99.8 9.3E-20 3.2E-24 149.3 12.6 129 17-160 212-381 (384)
10 1qz1_A Neural cell adhesion mo 99.8 2.5E-19 8.6E-24 139.9 14.4 130 12-152 4-178 (291)
11 2v5t_A NCAM2, N-CAM 2, neural 99.8 1.6E-19 5.5E-24 132.5 12.0 128 11-152 3-175 (189)
12 1fnl_A Low affinity immunoglob 99.8 1.5E-18 5.1E-23 127.4 15.9 133 11-161 8-173 (175)
13 2yd1_A Tyrosine-protein phosph 99.8 5.6E-19 1.9E-23 132.9 13.8 138 10-162 6-200 (212)
14 3sgj_C Human FCG3A receptor; r 99.8 1.5E-18 5.2E-23 131.3 15.9 132 11-160 8-172 (204)
15 2vr9_A Roundabout 1, ROBO; imm 99.8 5.8E-19 2E-23 132.7 13.3 134 10-152 9-193 (217)
16 3s97_C Contactin-1; carbonic a 99.8 1E-18 3.5E-23 129.1 14.0 129 10-152 8-188 (201)
17 3lcy_A Titin; A-BAND, IG tande 99.8 8.1E-19 2.8E-23 129.3 13.1 128 10-152 7-183 (197)
18 3ry4_A Low affinity immunoglob 99.8 2.1E-18 7.1E-23 125.2 14.1 123 12-152 6-157 (170)
19 3b5h_A Cervical EMMPRIN, HAB18 99.8 3E-18 1E-22 125.8 15.0 127 16-152 4-170 (184)
20 2v9r_A Roundabout homolog 1; p 99.8 7.1E-19 2.4E-23 131.2 11.7 128 10-152 9-188 (212)
21 2v5m_A Dscam; neurobiology SPL 99.8 1.5E-18 5E-23 140.9 14.3 142 10-156 3-192 (388)
22 2c5d_C AXL oncogene, tyrosine- 99.8 4.1E-19 1.4E-23 131.7 9.7 135 10-163 2-194 (195)
23 1f2q_A High affinity immunoglo 99.8 7E-19 2.4E-23 129.1 10.7 133 11-161 5-170 (176)
24 1qz1_A Neural cell adhesion mo 99.8 1.8E-18 6.3E-23 135.0 12.8 140 11-160 101-288 (291)
25 2wim_A N-CAM 2, NCAM2, neural 99.8 2.6E-18 8.8E-23 134.1 12.8 130 10-152 4-176 (291)
26 2wv3_A Neuroplastin; igcam, me 99.8 8.8E-18 3E-22 124.1 14.8 127 17-152 9-177 (190)
27 1f97_A Junction adhesion molec 99.8 7.5E-18 2.6E-22 125.4 13.9 143 12-162 3-207 (212)
28 3kld_A Contactin 4, axcam, BIG 99.8 2.3E-18 7.7E-23 141.0 11.9 130 10-152 5-180 (384)
29 2ny1_B T-cell surface glycopro 99.8 1.5E-17 5.1E-22 122.4 15.1 121 19-160 4-177 (184)
30 2wim_A N-CAM 2, NCAM2, neural 99.8 5.1E-18 1.8E-22 132.4 13.2 136 12-161 100-283 (291)
31 1oll_A NK receptor; immune sys 99.8 5E-18 1.7E-22 126.2 12.5 132 11-161 5-187 (188)
32 1ugn_A LIR1, leukocyte immunog 99.8 5.1E-18 1.8E-22 126.7 12.5 125 11-152 6-180 (198)
33 3dmk_A DOWN syndrome cell adhe 99.8 2.8E-18 9.7E-23 152.1 12.9 145 11-160 39-231 (816)
34 2d3v_A Leukocyte immunoglobuli 99.8 2.9E-18 1E-22 128.0 11.0 126 11-152 6-179 (196)
35 4f80_A Butyrophilin subfamily 99.8 4.9E-18 1.7E-22 129.1 12.2 133 12-152 4-200 (226)
36 3k0w_A Mucosa-associated lymph 99.8 8.2E-18 2.8E-22 127.5 13.2 130 11-161 19-201 (218)
37 2va4_A NCAM2, N-CAM 2, neural 99.8 6.3E-18 2.2E-22 124.1 12.1 128 16-152 10-180 (192)
38 4frw_A Poliovirus receptor-rel 99.8 5.6E-18 1.9E-22 125.7 11.8 130 16-152 5-198 (218)
39 3p2t_A Leukocyte immunoglobuli 99.8 2.1E-18 7.2E-23 128.6 9.3 126 11-152 6-178 (196)
40 3r4d_A CEA-related cell adhesi 99.8 1.6E-17 5.3E-22 123.9 14.0 125 13-152 2-186 (208)
41 2rik_A Titin; I-SET IG fold, p 99.8 1.4E-17 4.9E-22 129.6 14.3 130 8-152 3-178 (284)
42 3laf_A Deleted in colorectal c 99.8 5.4E-18 1.9E-22 137.9 12.0 133 13-160 224-399 (403)
43 2yd9_A Receptor-type tyrosine- 99.8 5E-18 1.7E-22 134.0 11.4 132 9-152 5-187 (304)
44 2rik_A Titin; I-SET IG fold, p 99.8 2.7E-17 9.1E-22 128.1 15.3 119 19-152 108-271 (284)
45 2r15_A Myomesin-1; sarcomeric 99.8 4.4E-17 1.5E-21 121.6 15.7 115 24-152 16-197 (212)
46 2nzi_A Titin; IG-domain, FNIII 99.8 1.5E-17 5.2E-22 130.7 13.4 128 10-152 4-184 (305)
47 3b43_A Titin; I-SET IG fold, e 99.8 5.5E-18 1.9E-22 145.6 11.8 136 11-160 385-568 (570)
48 1rhf_A Tyrosine-protein kinase 99.7 3E-17 1E-21 120.1 14.0 121 11-152 3-169 (182)
49 2gi7_A GPVI protein; IG-like d 99.7 4.9E-18 1.7E-22 125.9 9.8 123 12-152 10-167 (184)
50 2y23_A Myomesin; structural pr 99.7 3.3E-17 1.1E-21 128.8 15.1 126 12-152 108-299 (312)
51 3jz7_A MCAR, CAR, coxsackievir 99.7 8.5E-18 2.9E-22 125.0 10.5 130 14-152 4-199 (214)
52 3laf_A Deleted in colorectal c 99.7 1.2E-17 4.1E-22 135.9 11.8 131 11-152 22-200 (403)
53 1cs6_A Axonin-1; neural cell a 99.7 2.8E-17 9.5E-22 133.2 13.7 120 17-152 214-369 (382)
54 3mj6_A Junctional adhesion mol 99.7 2E-17 6.7E-22 128.0 12.3 148 12-160 7-235 (268)
55 3p3y_A Neurofascin; IG domains 99.7 2.2E-17 7.4E-22 134.2 13.0 130 18-160 230-401 (404)
56 1uct_A Immunoglobulin alpha FC 99.7 2.3E-17 8E-22 126.2 12.0 135 11-162 10-198 (218)
57 2x1w_L Vascular endothelial gr 99.7 3.2E-17 1.1E-21 123.9 12.6 140 15-161 12-206 (213)
58 2jll_A NCAM2, neural cell adhe 99.7 4.5E-17 1.6E-21 132.1 14.2 125 16-152 6-181 (389)
59 3rjd_A High affinity immunoglo 99.7 6.7E-17 2.3E-21 124.1 14.4 124 11-152 2-154 (262)
60 3b43_A Titin; I-SET IG fold, e 99.7 2.9E-17 9.8E-22 141.2 13.5 128 10-152 5-180 (570)
61 1jbj_A CD3 epsilon and gamma e 99.7 1.4E-17 4.9E-22 124.0 10.1 112 20-155 9-179 (186)
62 2fbo_J V1V2;, variable region- 99.7 8.7E-18 3E-22 128.4 9.1 134 14-152 6-236 (250)
63 1bih_A Hemolin; insect immunit 99.7 3E-17 1E-21 133.2 12.7 119 17-152 219-383 (395)
64 3o4o_C Interleukin-1 receptor 99.7 1.1E-17 3.8E-22 133.7 9.6 132 11-152 19-203 (339)
65 2v5m_A Dscam; neurobiology SPL 99.7 7.1E-17 2.4E-21 130.9 13.7 138 8-152 101-293 (388)
66 1wio_A CD4, T-cell surface gly 99.7 1.2E-16 3.9E-21 129.4 14.4 127 20-151 106-277 (363)
67 1nbq_A JAM, junctional adhesio 99.7 9E-18 3.1E-22 124.7 7.2 134 12-153 6-195 (209)
68 3bp6_B Programmed cell death 1 99.7 1E-16 3.6E-21 119.4 12.9 124 16-152 8-180 (202)
69 1sy6_A T-cell surface glycopro 99.7 2.4E-17 8.2E-22 124.8 9.3 118 18-153 10-191 (204)
70 3ojm_B Fibroblast growth facto 99.7 8E-17 2.7E-21 121.3 11.8 130 18-160 27-219 (231)
71 2ifg_A High affinity nerve gro 99.7 9.6E-18 3.3E-22 135.8 7.1 131 10-152 158-332 (347)
72 4fmk_A Poliovirus receptor-rel 99.7 9E-17 3.1E-21 119.7 11.2 131 17-152 8-204 (225)
73 2p1y_A Bispecific alpha/beta T 99.7 6.4E-16 2.2E-20 117.8 15.9 131 13-151 3-221 (238)
74 3ejj_X Macrophage colony-stimu 99.7 1.4E-16 5E-21 124.0 11.8 140 13-160 92-279 (289)
75 1hng_A CD2; T lymphocyte adhes 99.7 4.1E-16 1.4E-20 115.3 13.7 116 18-153 4-164 (176)
76 2y25_A Myomesin; structural pr 99.7 3E-16 1E-20 123.5 13.7 66 76-152 233-302 (317)
77 2o26_X MAST/stem cell growth f 99.7 6.7E-16 2.3E-20 120.8 15.6 123 11-152 13-169 (290)
78 3oq3_B IFN-alpha/beta binding 99.7 1.4E-16 4.7E-21 127.7 11.8 124 17-151 36-204 (329)
79 3grw_A Fibroblast growth facto 99.7 8.1E-17 2.8E-21 122.5 10.0 130 17-160 22-216 (241)
80 2ec8_A MAST/stem cell growth f 99.7 8E-17 2.7E-21 136.2 10.9 130 11-152 212-398 (524)
81 1cs6_A Axonin-1; neural cell a 99.7 6.9E-17 2.4E-21 130.9 9.5 132 9-152 3-181 (382)
82 3ux9_B SCFV antibody; five hel 99.7 2.7E-16 9.1E-21 121.5 12.4 134 15-151 7-235 (256)
83 1itb_B Type 1 interleukin-1 re 99.7 5.6E-16 1.9E-20 122.4 14.4 125 18-152 111-301 (315)
84 4fqp_A Poliovirus receptor; im 99.7 1.8E-16 6.1E-21 125.7 11.4 133 11-160 118-302 (313)
85 3esu_F Antibody 14B7* light ch 99.7 1.2E-15 3.9E-20 117.4 15.6 133 13-150 7-231 (250)
86 1ry7_B FGFR-3, fibroblast grow 99.7 3E-16 1E-20 124.9 12.3 131 18-161 131-326 (334)
87 2y25_A Myomesin; structural pr 99.7 3.4E-16 1.2E-20 123.2 11.3 130 11-152 8-187 (317)
88 3qs9_E FL cytokine receptor; i 99.7 1.4E-16 4.9E-21 136.7 9.9 121 16-152 233-401 (527)
89 3auv_A SC-DSFV derived from th 99.7 1.8E-15 6.1E-20 118.8 15.2 147 11-162 13-254 (276)
90 4dep_C Interleukin-1 receptor 99.7 2.7E-16 9.1E-21 126.1 10.6 127 17-152 14-200 (349)
91 2ocw_A Polymeric-immunoglobuli 99.7 2E-15 6.7E-20 129.0 16.3 143 15-160 5-219 (585)
92 3rjd_A High affinity immunoglo 99.7 2.5E-15 8.5E-20 115.2 15.3 127 8-153 80-247 (262)
93 3p3y_A Neurofascin; IG domains 99.7 9.8E-16 3.3E-20 124.4 13.6 123 16-152 122-298 (404)
94 3knb_B Obscurin-like protein 1 99.7 2.5E-16 8.5E-21 108.3 8.5 84 66-160 14-103 (107)
95 3qs7_E FL cytokine receptor; i 99.7 4E-16 1.4E-20 130.4 11.5 132 21-160 150-321 (423)
96 2znx_A SCFV; fluorotryptohpan, 99.7 2.7E-15 9.2E-20 115.5 15.3 146 12-162 3-235 (242)
97 1p6f_A NKP46, natural cytotoxi 99.7 1.1E-15 3.7E-20 119.0 13.2 134 11-162 8-191 (242)
98 2o26_X MAST/stem cell growth f 99.7 1.4E-16 4.9E-21 124.7 8.1 127 15-152 96-275 (290)
99 3uzq_A Anti-dengue MAB 4E11; d 99.7 1E-15 3.5E-20 118.4 12.8 145 13-162 4-244 (253)
100 1vca_A VCAM-D1,2, human vascul 99.7 1.1E-15 3.7E-20 115.4 12.7 133 13-152 3-177 (202)
101 3d9a_L Light chain of hyhel10 99.7 1.5E-16 5E-21 119.3 7.7 131 13-152 4-200 (213)
102 2yd9_A Receptor-type tyrosine- 99.7 3.2E-16 1.1E-20 123.6 10.1 130 11-160 109-289 (304)
103 2ocw_A Polymeric-immunoglobuli 99.7 3E-15 1E-19 127.8 16.8 145 12-161 333-545 (585)
104 3nl4_L Antigen binding fragmen 99.7 7.3E-16 2.5E-20 115.5 11.4 128 13-149 4-198 (213)
105 4dkd_C Macrophage colony-stimu 99.7 2.4E-16 8.4E-21 122.9 9.1 137 9-161 3-180 (292)
106 1nkr_A P58-CL42 KIR; inhibitor 99.7 1E-15 3.5E-20 114.6 12.0 123 12-152 10-184 (201)
107 1itb_B Type 1 interleukin-1 re 99.7 2.8E-16 9.5E-21 124.2 9.1 124 19-152 14-186 (315)
108 1wio_A CD4, T-cell surface gly 99.7 2.1E-15 7.1E-20 122.0 14.3 113 19-152 3-165 (363)
109 3sbw_C Programmed cell death 1 99.7 1.4E-15 4.7E-20 114.3 12.0 126 16-152 7-198 (222)
110 1moe_A Anti-CEA MAB T84.66; an 99.7 1.2E-15 4E-20 116.5 11.8 136 13-150 4-219 (240)
111 3knb_A Titin; IG-like, titin, 99.6 3.5E-16 1.2E-20 106.2 7.9 83 69-160 9-97 (100)
112 4i0k_A CD276 antigen; immunogl 99.6 6.6E-16 2.3E-20 116.2 9.8 136 19-161 4-205 (222)
113 3vh8_G Killer cell immunoglobu 99.6 1.2E-15 4.2E-20 121.2 11.7 129 10-152 24-197 (316)
114 3tf7_C 42F3 MUT7 SCFV (42F3 al 99.6 1.4E-15 4.9E-20 118.0 11.8 145 11-163 4-249 (256)
115 3mjg_X Beta-type platelet-deri 99.6 2.4E-15 8.2E-20 117.4 13.1 128 20-160 105-276 (289)
116 3ejj_X Macrophage colony-stimu 99.6 3.7E-15 1.3E-19 116.0 14.1 132 13-161 7-180 (289)
117 1ry7_B FGFR-3, fibroblast grow 99.6 1.2E-16 4.1E-21 127.3 5.6 129 13-152 11-203 (334)
118 3juy_B 3B3 single chain varian 99.6 3E-15 1E-19 115.8 13.3 137 11-152 7-243 (256)
119 1e07_A Carcinoembryonic antige 99.6 3.2E-15 1.1E-19 129.3 14.5 131 14-160 385-555 (642)
120 2ghw_B Anti-SARS SCFV antibody 99.6 5E-15 1.7E-19 113.6 14.1 141 15-161 7-241 (247)
121 3oq3_B IFN-alpha/beta binding 99.6 1.1E-15 3.8E-20 122.4 10.7 123 20-152 138-317 (329)
122 1svz_A Immunoglobulin;, single 99.6 1.4E-14 4.9E-19 111.2 16.3 138 13-152 4-229 (247)
123 1bih_A Hemolin; insect immunit 99.6 3.9E-16 1.3E-20 126.6 7.8 133 11-152 7-187 (395)
124 1qok_A MFE-23 recombinant anti 99.6 5.1E-15 1.8E-19 116.6 13.9 149 8-163 24-269 (282)
125 3qs7_E FL cytokine receptor; i 99.6 1.1E-15 3.8E-20 127.7 10.3 121 17-152 234-401 (423)
126 3umt_A SCFV heavy chain and li 99.6 3.5E-15 1.2E-19 115.5 12.3 144 15-163 7-246 (256)
127 1lk3_L 9D7 light chain; antige 99.6 1.4E-15 4.9E-20 114.0 9.4 127 17-152 7-199 (210)
128 1waa_A Titin; metal binding pr 99.6 1.3E-15 4.3E-20 102.2 8.1 81 68-161 8-91 (93)
129 4dkd_C Macrophage colony-stimu 99.6 7.9E-16 2.7E-20 120.0 8.1 141 13-161 92-280 (292)
130 1nqb_A Single-chain antibody f 99.6 1.7E-14 5.9E-19 112.2 15.7 143 14-162 4-233 (256)
131 3mj8_L Stimulatory hamster ant 99.6 1E-14 3.5E-19 109.2 13.6 130 13-152 4-200 (213)
132 3bkj_L WO2 IGG2A FAB fragment 99.6 6.7E-16 2.3E-20 119.3 7.3 144 3-152 26-238 (252)
133 2edj_A Roundabout homolog 2; K 99.6 3.6E-15 1.2E-19 99.9 9.5 83 69-161 12-97 (100)
134 3sob_L Antibody light chain; b 99.6 3.5E-15 1.2E-19 113.1 10.5 131 13-152 27-223 (237)
135 1f3r_B FV antibody fragment; I 99.6 1.1E-14 3.7E-19 113.1 13.3 142 15-162 5-245 (257)
136 2pet_A Lutheran blood group gl 99.6 2.7E-15 9.4E-20 113.1 9.7 128 16-152 6-212 (231)
137 3gkz_A Anti-methamphetamine si 99.6 1.1E-14 3.7E-19 112.6 13.1 145 15-164 13-251 (257)
138 2zg1_A Sialic acid-binding IG- 99.6 3.1E-15 1.1E-19 111.9 9.7 127 15-152 5-200 (214)
139 3u83_A Poliovirus receptor-rel 99.6 3.3E-15 1.1E-19 118.5 10.4 129 16-161 138-319 (331)
140 2y23_A Myomesin; structural pr 99.6 8.3E-15 2.8E-19 115.0 12.4 121 19-152 10-189 (312)
141 3v2a_R Vascular endothelial gr 99.6 5.7E-17 2E-21 142.1 0.0 133 13-160 553-754 (772)
142 1dr9_A B7-1 (CD80), T lymphocy 99.6 3.2E-15 1.1E-19 111.1 9.6 125 18-152 2-188 (201)
143 1u2h_A APEG-1, aortic preferen 99.6 5.5E-15 1.9E-19 98.5 9.7 84 68-161 8-97 (99)
144 3dmk_A DOWN syndrome cell adhe 99.6 1.1E-14 3.8E-19 129.1 14.6 126 12-152 431-603 (816)
145 3omz_A Human vdelta1 gamma del 99.6 1.1E-14 3.7E-19 112.9 12.7 146 11-162 3-250 (259)
146 1z7z_I Intercellular adhesion 99.6 9E-16 3.1E-20 127.1 6.8 123 13-152 2-165 (450)
147 2c1o_A IGK-C protein; FAB frag 99.6 4.5E-15 1.5E-19 114.3 10.0 137 10-152 38-242 (254)
148 3r06_A Anti-mouse CD3epsilon a 99.6 5.4E-15 1.9E-19 110.7 9.9 132 13-152 4-200 (213)
149 2ec8_A MAST/stem cell growth f 99.6 8.2E-15 2.8E-19 123.8 12.2 129 15-160 41-204 (524)
150 3qp3_A Titin; I-SET IG-like, s 99.6 7.2E-15 2.5E-19 98.7 9.5 85 67-162 10-100 (103)
151 1q0x_L FAB 9B1, light chain; a 99.6 2.9E-15 9.8E-20 112.3 8.2 130 17-152 7-202 (212)
152 4fom_A Poliovirus receptor-rel 99.6 5.6E-16 1.9E-20 122.2 4.5 116 21-152 125-287 (308)
153 1e07_A Carcinoembryonic antige 99.6 2.2E-14 7.4E-19 124.0 14.8 124 13-152 206-365 (642)
154 2lu7_A Obscurin-like protein 1 99.6 3.2E-15 1.1E-19 98.7 7.1 76 73-161 4-82 (84)
155 2yuz_A Myosin-binding protein 99.6 4.5E-15 1.5E-19 100.6 7.7 79 69-160 11-93 (100)
156 2wng_A Tyrosine-protein phosph 99.6 6.3E-15 2.2E-19 117.4 9.7 125 20-154 127-308 (327)
157 2oz4_A Intercellular adhesion 99.6 9.9E-15 3.4E-19 113.2 10.3 109 15-152 103-251 (265)
158 2if7_A SLAM family member 6; N 99.6 5.4E-14 1.9E-18 105.0 13.9 120 15-155 3-182 (193)
159 3qs9_E FL cytokine receptor; i 99.6 9.1E-15 3.1E-19 125.5 10.7 132 21-160 150-321 (527)
160 2gki_A Nuclease; anti-DNA anti 99.6 4.8E-14 1.6E-18 111.8 14.1 147 10-161 22-271 (291)
161 2eo9_A Roundabout homolog 1; b 99.6 6.4E-15 2.2E-19 101.7 7.9 74 69-152 12-85 (118)
162 3o4o_C Interleukin-1 receptor 99.6 5.5E-15 1.9E-19 118.0 8.6 125 20-152 130-322 (339)
163 1qgc_4 Protein (immunoglobulin 99.6 6.4E-15 2.2E-19 121.3 9.2 122 22-150 128-318 (438)
164 2kdg_A Myotilin; immonoglobuli 99.6 1.4E-14 4.9E-19 96.6 9.2 85 68-161 8-97 (100)
165 3puc_A Titin; I-SET IG-like do 99.6 1.8E-14 6.2E-19 95.8 9.5 82 68-160 9-96 (99)
166 1g1c_A Immunoglobulin-like dom 99.6 2.5E-14 8.5E-19 95.3 9.9 74 68-152 8-85 (99)
167 2kkq_A Myotilin; unknown funct 99.6 1.5E-14 5.3E-19 100.1 8.7 77 66-152 16-96 (116)
168 3vh8_G Killer cell immunoglobu 99.6 1.4E-14 4.7E-19 115.1 9.5 122 13-152 122-295 (316)
169 3bqu_C 3H6 FAB light chain; be 99.6 9.7E-16 3.3E-20 116.5 2.6 131 13-152 26-222 (233)
170 3irg_B Obscurin-like protein 1 99.6 2E-14 6.9E-19 97.0 8.9 75 67-152 15-92 (107)
171 2bk8_A Connectin, M1, titin he 99.6 2.2E-14 7.5E-19 95.6 9.0 82 72-163 8-95 (97)
172 1nfd_E H57 FAB; complex (immun 99.6 1.8E-15 6.2E-20 113.4 4.0 126 17-152 6-199 (212)
173 2lvc_A Obscurin-like protein 1 99.6 4.1E-15 1.4E-19 99.6 5.3 70 77-159 18-90 (91)
174 1b6u_A KIR2DL3, P58 killer cel 99.6 2E-14 6.8E-19 113.0 10.1 121 12-151 9-182 (257)
175 2xzc_L FAB A.17 light chain; i 99.5 7.2E-14 2.5E-18 105.0 12.7 129 17-152 7-202 (216)
176 4fom_A Poliovirus receptor-rel 99.5 1.2E-14 3.9E-19 114.7 8.6 126 19-152 8-195 (308)
177 2wng_A Tyrosine-protein phosph 99.5 3.2E-14 1.1E-18 113.3 11.0 131 12-152 5-203 (327)
178 3pv7_A B7-H6, IG-like domain-c 99.5 1.1E-14 3.8E-19 111.7 8.0 132 15-152 8-211 (248)
179 2cqv_A MLCK, myosin light chai 99.5 1.7E-14 5.8E-19 99.0 8.1 79 71-160 13-97 (114)
180 2dlt_A Myosin binding protein 99.5 1.3E-14 4.6E-19 98.4 7.4 82 68-161 11-96 (106)
181 2gjj_A A21 single-chain antibo 99.5 2.4E-13 8.3E-18 106.3 15.5 136 12-151 7-239 (264)
182 2rcj_C Light chain; immunoglob 99.5 5.6E-14 1.9E-18 118.7 12.5 129 14-152 4-201 (523)
183 2ckn_A Basic fibroblast growth 99.5 2.9E-14 9.9E-19 95.0 8.2 68 72-152 16-83 (95)
184 2rcj_C Light chain; immunoglob 99.5 2.8E-14 9.5E-19 120.6 10.1 125 20-152 229-407 (523)
185 3irg_A Titin; IG-like, titin, 99.5 2.2E-14 7.4E-19 95.3 7.4 72 72-152 12-86 (100)
186 3u83_A Poliovirus receptor-rel 99.5 9.5E-14 3.2E-18 110.1 12.4 133 13-152 17-217 (331)
187 1x9q_A SCFV, 4M5.3 anti-fluore 99.5 2.5E-13 8.6E-18 105.9 14.3 136 13-151 18-254 (268)
188 2yr3_A Myosin light chain kina 99.5 2E-14 7E-19 96.0 6.9 76 66-152 12-87 (99)
189 3cx2_A Myosin-binding protein 99.5 2.2E-14 7.5E-19 97.9 7.1 85 68-160 7-106 (108)
190 1gxe_A Myosin binding protein 99.5 9.2E-15 3.1E-19 105.3 5.3 72 72-152 25-126 (139)
191 1c1e_H Catalytic antibody 1E9 99.5 4.4E-14 1.5E-18 106.4 9.4 130 15-152 5-207 (219)
192 3tv3_L PGT128 light chain, IG 99.5 2.7E-14 9.3E-19 106.9 8.0 127 15-152 6-198 (211)
193 3s96_B 3B5H10 FAB light chain; 99.5 9E-14 3.1E-18 104.2 10.8 130 13-152 4-207 (218)
194 3eow_R Poliovirus receptor; im 99.5 4E-14 1.4E-18 106.8 8.5 131 17-152 6-199 (221)
195 3kvq_A Vascular endothelial gr 99.5 5.6E-14 1.9E-18 95.0 8.2 82 69-161 14-99 (108)
196 4dzb_B Vbeta2 (MAIT T cell rec 99.5 1.4E-13 4.7E-18 105.4 11.4 132 12-152 3-218 (246)
197 1qgc_4 Protein (immunoglobulin 99.5 6.9E-14 2.4E-18 115.1 10.1 134 13-152 4-204 (438)
198 2dm2_A Palladin; beta-sandwich 99.5 5.8E-14 2E-18 95.6 7.9 73 70-152 13-89 (110)
199 2j6e_L IGM, FAB light chain; a 99.5 7.4E-15 2.5E-19 111.5 3.8 129 17-152 26-222 (234)
200 1nct_A Titin; cell adhesion, g 99.5 1.1E-14 3.6E-19 99.4 4.1 82 68-160 17-104 (106)
201 2dav_A SLOW MYBP-C, myosin-bin 99.5 2.7E-14 9.2E-19 101.5 6.0 89 67-160 9-109 (126)
202 2dru_A Chimera of CD48 antigen 99.5 5.3E-13 1.8E-17 99.1 13.4 118 17-155 6-171 (180)
203 1hnf_A CD2; T lymphocyte adhes 99.5 5.4E-13 1.8E-17 99.7 13.5 118 17-155 6-171 (182)
204 2edn_A Myosin-binding protein 99.5 1.7E-14 5.8E-19 101.4 4.7 90 66-160 13-114 (118)
205 2dm3_A KIAA0992 protein, palla 99.5 3.6E-14 1.2E-18 96.4 5.8 76 68-152 12-89 (110)
206 1wit_A Twitchin 18TH IGSF modu 99.5 5.3E-14 1.8E-18 93.1 6.0 70 73-152 10-81 (93)
207 1x44_A Myosin-binding protein 99.5 6.9E-14 2.4E-18 94.4 6.6 78 71-161 13-95 (103)
208 3nfj_J T cell receptor beta ch 99.5 7.8E-13 2.7E-17 101.3 13.3 133 11-152 2-217 (245)
209 4fqp_A Poliovirus receptor; im 99.5 8.9E-14 3E-18 110.1 8.2 133 14-152 4-200 (313)
210 3m45_A Cell adhesion molecule 99.5 1.8E-13 6.3E-18 92.0 8.6 79 68-150 9-92 (108)
211 2cr3_A Basic fibroblast growth 99.5 8.9E-14 3.1E-18 93.4 6.9 68 72-152 10-77 (99)
212 2edf_A Obscurin; beta-sandwich 99.5 7.6E-14 2.6E-18 93.9 6.5 79 70-161 13-94 (103)
213 3fku_X Neutralizing antibody F 99.5 3.4E-13 1.2E-17 106.2 11.3 140 17-160 7-248 (280)
214 2eny_A Obscurin; beta-sandwich 99.5 3.6E-14 1.2E-18 96.6 4.8 78 71-160 14-95 (104)
215 2e7c_A Myosin-binding protein 99.5 2.4E-13 8.1E-18 93.9 8.9 76 73-160 32-113 (118)
216 2e6q_A Obscurin-like protein 1 99.5 2.9E-13 1E-17 94.2 9.3 82 68-162 11-105 (112)
217 3m8o_H Immunoglobulin A1 heavy 99.5 1.1E-12 3.8E-17 99.1 13.3 139 15-160 5-218 (221)
218 2edk_A Myosin-binding protein 99.5 4.5E-14 1.5E-18 94.9 4.9 81 69-160 12-97 (101)
219 1fhg_A Telokin; immunoglobulin 99.5 3.7E-13 1.3E-17 97.3 10.0 77 65-152 41-121 (154)
220 4dep_C Interleukin-1 receptor 99.5 1.1E-13 3.9E-18 110.7 7.9 129 17-152 127-320 (349)
221 2rgs_A I, IG gamma-2B heavy ch 99.5 3.7E-14 1.3E-18 107.7 4.8 121 22-152 23-203 (218)
222 1z7z_I Intercellular adhesion 99.5 1.2E-12 4E-17 108.3 13.9 126 13-152 89-269 (450)
223 2e6p_A Obscurin-like protein 1 99.5 9.9E-14 3.4E-18 93.5 6.0 73 75-160 20-95 (104)
224 4hwu_A Fibroblast growth facto 99.5 3.2E-13 1.1E-17 89.6 8.4 75 72-160 8-85 (95)
225 1gl4_B Basement membrane-speci 99.5 1.5E-13 5.2E-18 91.6 6.8 67 74-152 19-85 (98)
226 2wqr_A IG epsilon chain C regi 99.4 2.9E-14 1E-18 113.8 3.8 131 18-154 121-309 (323)
227 2wqr_A IG epsilon chain C regi 99.4 7.4E-14 2.5E-18 111.4 5.9 120 26-152 25-201 (323)
228 4ei6_B Vbeta16 XV19 type II na 99.4 8.6E-13 2.9E-17 100.9 11.7 132 11-152 3-217 (245)
229 1pz5_B Heavy chain of FAB (SYA 99.4 2.7E-13 9.2E-18 102.3 8.7 129 15-152 5-208 (220)
230 1ccz_A Protein (CD58); LFA-3, 99.4 3.2E-12 1.1E-16 94.1 14.3 114 17-154 2-160 (171)
231 2vol_A Murine IGG FC; FC, zinc 99.4 3E-14 1E-18 107.3 3.4 128 16-152 8-195 (207)
232 3q5y_A TCR N15 beta; IG, T cel 99.4 1.3E-12 4.6E-17 99.7 12.7 131 12-152 4-211 (240)
233 1he7_A High affinity nerve gro 99.4 2.4E-13 8.4E-18 96.5 7.7 63 79-152 14-86 (126)
234 3caf_A Fibroblast growth facto 99.4 2.4E-13 8.2E-18 90.7 7.0 70 75-152 18-88 (100)
235 2k1m_A Myosin-binding protein 99.4 2.3E-13 8E-18 90.5 6.7 79 69-160 12-93 (95)
236 3bfo_A Mucosa-associated lymph 99.4 5E-13 1.7E-17 88.1 8.1 76 70-162 8-87 (91)
237 1q9r_B S25-2 FAB (IGG1K) heavy 99.4 4E-13 1.4E-17 101.5 8.6 132 15-154 5-212 (222)
238 2e7b_A Obscurin; IG-like domai 99.4 4E-13 1.4E-17 90.3 7.7 77 71-160 14-93 (103)
239 1pd6_A Cardiac MYBP-C;, myosin 99.4 2.8E-13 9.5E-18 92.3 6.9 81 68-160 18-102 (104)
240 3d9a_H Heavy chain of hyhel10 99.4 1.3E-13 4.5E-18 103.3 5.2 132 15-154 5-203 (210)
241 2cpc_A KIAA0657 protein; immun 99.4 7.4E-13 2.5E-17 90.3 8.4 74 75-161 23-99 (113)
242 3so5_A LIG-3, leucine-rich rep 99.4 3.6E-13 1.2E-17 90.5 6.5 77 72-152 17-99 (112)
243 2edh_A Obscurin; structural ge 99.4 6.2E-13 2.1E-17 90.9 7.7 80 68-161 22-104 (113)
244 3pl6_D MBP peptide / T-cell re 99.4 1.5E-12 5.2E-17 101.0 10.5 132 11-152 27-239 (268)
245 3v2a_R Vascular endothelial gr 99.4 1.4E-13 4.9E-18 120.5 5.2 119 20-152 234-404 (772)
246 2dku_A KIAA1556 protein; beta- 99.4 7.6E-13 2.6E-17 88.9 7.7 80 70-162 13-95 (103)
247 1wwb_X Protein (brain derived 99.4 1E-12 3.5E-17 89.1 8.4 63 79-152 15-85 (103)
248 2yuv_A Myosin-binding protein 99.4 7.4E-13 2.5E-17 88.7 7.4 81 68-161 10-94 (100)
249 2v9t_A Roundabout homolog 1; s 99.4 1.6E-12 5.5E-17 89.3 9.1 80 67-152 11-95 (117)
250 3qib_D 2B4 beta chain; IG doma 99.4 1.6E-12 5.5E-17 101.1 10.2 131 12-152 29-242 (270)
251 2dm7_A KIAA1556 protein; beta- 99.4 2.3E-13 8E-18 92.2 4.7 76 71-160 14-92 (108)
252 3o3u_N Maltose-binding peripla 99.4 1.7E-12 5.8E-17 111.0 10.8 126 17-154 373-566 (581)
253 2eo1_A OBSCN protein, cDNA FLJ 99.4 7.3E-13 2.5E-17 88.9 6.5 74 74-160 20-96 (102)
254 3mtr_A N-CAM-1, NCAM-1, neural 99.4 8.3E-12 2.8E-16 93.7 12.9 129 11-152 20-196 (215)
255 3rbg_A Cytotoxic and regulator 99.4 1.4E-12 4.9E-17 90.9 7.7 76 72-151 8-88 (124)
256 2wbj_D OB TCR; transmembrane, 99.4 3.5E-12 1.2E-16 100.0 10.8 133 11-152 25-243 (279)
257 2ens_A Advanced glycosylation 99.4 9E-13 3.1E-17 87.7 6.4 68 68-152 13-80 (96)
258 2qsq_A Carcinoembryonic antige 99.4 5.6E-12 1.9E-16 87.3 10.3 80 69-152 4-95 (111)
259 1gsm_A Madcam-1, mucosal addre 99.4 1.2E-11 4E-16 95.0 12.9 132 12-152 7-192 (210)
260 1l6x_A Immunoglobulin gamma-1 99.4 3.2E-13 1.1E-17 101.5 4.1 121 23-152 16-195 (207)
261 3qr2_A Basigin; CD147, EMMPRIN 99.4 7.6E-13 2.6E-17 93.6 5.5 82 66-152 22-113 (137)
262 1za6_B IGG heavy chain; immuno 99.3 8.9E-13 3E-17 106.1 6.2 131 15-153 5-205 (344)
263 1op3_H FAB 2G12, heavy chain; 99.3 7.6E-12 2.6E-16 95.0 10.8 130 15-152 5-212 (225)
264 2fbj_H IGA-kappa J539 FAB (hea 99.3 1.7E-11 5.9E-16 92.9 12.6 132 14-152 4-208 (220)
265 3s35_X Vascular endothelial gr 99.3 2.4E-12 8.1E-17 88.9 7.1 83 75-160 18-108 (122)
266 1hng_A CD2; T lymphocyte adhes 99.3 7.2E-12 2.5E-16 92.3 10.0 75 75-152 6-84 (176)
267 2cr6_A KIAA1556 protein, obscu 99.3 1.2E-12 4E-17 90.1 5.3 82 68-161 16-101 (115)
268 1igt_B IGG2A intact antibody - 99.3 7.5E-13 2.6E-17 109.8 4.9 125 22-152 135-328 (444)
269 3nl4_H Antigen binding fragmen 99.3 1.1E-11 3.7E-16 93.2 10.7 128 15-152 4-201 (215)
270 2oz4_A Intercellular adhesion 99.3 1.5E-11 5.2E-16 95.1 11.5 111 20-152 13-165 (265)
271 3r08_E T-cell surface glycopro 99.3 1.4E-12 4.7E-17 85.9 4.8 60 72-150 6-66 (82)
272 2w59_A IGY FCU3-4; immunoglobu 99.3 1.9E-12 6.4E-17 99.3 6.2 131 15-152 18-215 (231)
273 2id5_A Lingo-1, leucine rich r 99.3 1.8E-12 6.3E-17 108.7 6.7 72 73-152 393-464 (477)
274 2c1o_A IGK-C protein; FAB frag 99.3 6E-12 2E-16 96.7 8.9 114 19-152 8-136 (254)
275 3to4_D NKT vbeta2 (mouse varia 99.3 2.2E-11 7.4E-16 94.1 11.9 129 15-152 6-217 (253)
276 3rbs_A Myomesin-1; immunoglobu 99.3 3.4E-12 1.2E-16 96.7 7.2 70 72-151 9-83 (207)
277 1mju_H Immunoglobulin MS6-12; 99.3 1.6E-11 5.3E-16 93.7 10.9 131 14-152 4-204 (227)
278 2xot_A Amphoterin-induced prot 99.3 4.7E-12 1.6E-16 103.4 8.3 80 73-161 254-336 (361)
279 1wwc_A Protein (NT-3 growth fa 99.3 6.5E-12 2.2E-16 86.5 7.2 61 81-152 21-88 (118)
280 2v5t_A NCAM2, N-CAM 2, neural 99.3 9.9E-12 3.4E-16 90.5 8.3 76 68-152 5-80 (189)
281 3lcy_A Titin; A-BAND, IG tande 99.3 2E-11 6.9E-16 89.2 9.9 74 68-152 10-86 (197)
282 2j8h_A Titin, connectin; cardi 99.3 2.4E-11 8.3E-16 89.3 10.2 75 68-152 7-85 (197)
283 1hzh_H IGG, immunoglobulin hea 99.3 5.4E-12 1.8E-16 105.1 7.1 123 22-152 261-441 (457)
284 1dee_B IGM RF 2A2; FAB-IBP com 99.3 3.9E-11 1.3E-15 91.1 11.2 131 15-152 5-214 (223)
285 1i1c_A IGG2A, IG gamma-2A chai 99.3 1.4E-12 4.7E-17 101.0 3.1 121 22-152 29-209 (239)
286 3zyj_A Leucine-rich repeat-con 99.3 1.1E-11 3.7E-16 103.4 8.7 88 65-160 334-431 (440)
287 2aty_A Complement receptor chi 99.3 1E-11 3.4E-16 102.0 8.2 126 22-152 180-360 (376)
288 1h5b_A Murine T cell receptor 99.3 1.9E-11 6.4E-16 83.8 8.3 86 72-162 8-111 (113)
289 3bae_H WO2 IGG2A FAB fragment 99.3 3E-11 1E-15 91.9 10.0 132 15-153 5-214 (228)
290 4fa8_A Secreted protein BARF1; 99.3 1.3E-11 4.5E-16 93.5 7.7 85 74-160 2-103 (203)
291 1igy_B IGG1 intact antibody MA 99.3 1.1E-12 3.8E-17 108.5 1.9 125 22-152 242-422 (434)
292 2cry_A KIN of IRRE-like protei 99.2 1.1E-12 3.8E-17 90.9 1.4 72 72-152 20-100 (122)
293 1jhl_L IGG1-kappa D11.15 FV (l 99.2 3.4E-11 1.1E-15 81.8 8.8 76 73-152 9-94 (108)
294 1igt_B IGG2A intact antibody - 99.2 3.5E-12 1.2E-16 105.7 4.4 121 22-152 252-432 (444)
295 1vca_A VCAM-D1,2, human vascul 99.2 4E-11 1.4E-15 90.1 9.8 79 70-160 5-88 (202)
296 3zyi_A Leucine-rich repeat-con 99.2 4.4E-12 1.5E-16 106.1 4.9 87 65-160 345-441 (452)
297 1hnf_A CD2; T lymphocyte adhes 99.2 3.5E-11 1.2E-15 89.7 9.3 75 75-152 9-89 (182)
298 3mtr_A N-CAM-1, NCAM-1, neural 99.2 1.6E-11 5.5E-16 92.1 7.4 73 71-152 24-99 (215)
299 1hzh_H IGG, immunoglobulin hea 99.2 3.6E-12 1.2E-16 106.1 4.1 122 21-152 143-337 (457)
300 3mjg_X Beta-type platelet-deri 99.2 4.9E-11 1.7E-15 92.7 10.3 113 14-152 4-164 (289)
301 1dn0_B IGM-kappa cold agglutin 99.2 2.8E-10 9.4E-15 87.0 14.2 132 15-153 5-215 (232)
302 3liz_H 4C3 monoclonal antibody 99.2 6.7E-11 2.3E-15 91.5 10.6 130 15-152 5-207 (253)
303 2ptt_A CD48 antigen; CD244, CD 99.2 7.8E-11 2.7E-15 80.1 9.7 83 75-161 13-107 (110)
304 1hxm_B Gamma-delta T-cell rece 99.2 2.3E-10 7.8E-15 87.8 13.3 133 12-152 3-216 (242)
305 2jll_A NCAM2, neural cell adhe 99.2 4.2E-11 1.5E-15 96.7 9.6 76 72-152 7-86 (389)
306 3q0h_A T cell immunoreceptor w 99.2 8.5E-11 2.9E-15 81.5 9.7 85 73-160 11-106 (117)
307 2nzi_A Titin; IG-domain, FNIII 99.2 4.8E-11 1.6E-15 93.4 9.4 75 68-152 7-85 (305)
308 3bp6_B Programmed cell death 1 99.2 4.1E-11 1.4E-15 88.8 8.5 68 75-152 12-90 (202)
309 1iga_A IGA1; immunoglobulin; N 99.2 2.2E-11 7.6E-16 102.0 7.9 124 21-152 258-441 (475)
310 4gos_A V-SET domain-containing 99.2 1.4E-10 4.7E-15 81.4 10.6 78 74-152 14-107 (125)
311 1iga_A IGA1; immunoglobulin; N 99.2 2.2E-10 7.5E-15 96.0 13.6 132 15-153 6-214 (475)
312 1z9m_A GAPA225; nectin-like, I 99.2 2.8E-11 9.5E-16 86.4 7.0 89 68-160 41-136 (145)
313 2yd1_A Tyrosine-protein phosph 99.2 7.1E-11 2.4E-15 88.3 9.5 75 68-152 9-88 (212)
314 1epf_A NCAM, protein (neural c 99.2 1.1E-10 3.9E-15 85.2 10.2 76 68-152 5-85 (191)
315 1igy_B IGG1 intact antibody MA 99.2 1E-11 3.5E-16 102.8 5.1 131 15-153 4-203 (434)
316 2if7_A SLAM family member 6; N 99.2 9.6E-11 3.3E-15 87.2 10.0 76 73-152 6-93 (193)
317 1ncn_A T lymphocyte activation 99.2 1.1E-10 3.9E-15 79.2 9.5 76 75-152 4-92 (110)
318 2iep_A Muscle-specific kinase 99.2 3.3E-11 1.1E-15 88.1 7.2 70 73-152 15-85 (192)
319 2yd6_A PTPRD protein; hydrolas 99.2 9E-11 3.1E-15 87.8 9.6 76 67-152 8-87 (212)
320 2v44_A NCAM2, neural cell adhe 99.2 6.1E-11 2.1E-15 86.7 8.5 73 69-152 6-81 (189)
321 2c5d_C AXL oncogene, tyrosine- 99.2 2.5E-11 8.7E-16 89.3 6.3 76 68-152 5-91 (195)
322 1oga_E TRBC1, T-cell receptor 99.2 1.1E-10 3.6E-15 90.2 10.0 131 12-152 5-216 (252)
323 1bec_A 14.3.D T cell antigen r 99.2 5.1E-11 1.8E-15 91.1 8.0 129 14-152 3-210 (238)
324 3khq_A B-cell antigen receptor 99.2 5.4E-11 1.8E-15 84.6 7.5 83 72-162 24-117 (133)
325 2xqy_G A13-D6.3 monoclonal ant 99.2 6.1E-11 2.1E-15 92.8 8.5 134 11-152 7-212 (261)
326 2v5y_A Receptor-type tyrosine- 99.2 1.9E-10 6.5E-15 101.4 12.5 113 26-152 92-246 (731)
327 2a38_A Titin; Z1Z2, structural 99.2 8.5E-11 2.9E-15 86.0 8.7 76 68-152 8-86 (194)
328 3udw_C Poliovirus receptor; PV 99.2 1.2E-10 4E-15 79.1 8.6 84 74-160 9-114 (118)
329 3nl4_L Antigen binding fragmen 99.2 1.1E-10 3.8E-15 86.9 9.2 77 72-152 8-94 (213)
330 2va4_A NCAM2, N-CAM 2, neural 99.2 6.7E-11 2.3E-15 86.2 7.6 68 74-152 13-81 (192)
331 1rhf_A Tyrosine-protein kinase 99.2 7E-11 2.4E-15 85.8 7.6 79 71-160 8-95 (182)
332 1pko_A Myelin oligodendrocyte 99.2 2.8E-10 9.6E-15 80.4 10.5 87 74-161 15-120 (139)
333 3s97_C Contactin-1; carbonic a 99.2 6.4E-11 2.2E-15 86.8 7.0 72 73-152 16-89 (201)
334 1iam_A ICAM-1, CD54, intercell 99.2 3.3E-09 1.1E-13 79.7 16.5 140 13-166 2-183 (185)
335 1ccz_A Protein (CD58); LFA-3, 99.1 1.7E-10 6E-15 84.7 8.9 81 74-160 4-92 (171)
336 3ojm_B Fibroblast growth facto 99.1 9.7E-11 3.3E-15 87.6 7.6 73 73-152 27-99 (231)
337 3p2t_A Leukocyte immunoglobuli 99.1 7.6E-11 2.6E-15 87.3 7.0 65 76-152 15-81 (196)
338 1xt5_A Variable region-contain 99.1 2.5E-10 8.6E-15 79.8 8.9 88 74-162 13-133 (135)
339 2oyp_A Hepatitis A virus cellu 99.1 2.4E-10 8.1E-15 76.8 8.3 77 75-152 4-95 (109)
340 3sgj_C Human FCG3A receptor; r 99.1 2.8E-10 9.6E-15 85.5 9.4 75 69-161 11-87 (204)
341 1ow0_A IG alpha-1 chain C regi 99.1 7.6E-12 2.6E-16 94.6 0.6 133 13-152 7-198 (214)
342 3r4d_A CEA-related cell adhesi 99.1 4.6E-10 1.6E-14 83.0 10.3 80 69-152 3-94 (208)
343 2q20_A VK1 O18/O8 germline lig 99.1 2.5E-10 8.4E-15 77.8 8.1 75 73-151 11-95 (109)
344 2d3v_A Leukocyte immunoglobuli 99.1 1.2E-10 4.1E-15 86.3 7.0 77 75-161 14-95 (196)
345 1oll_A NK receptor; immune sys 99.1 2.2E-10 7.5E-15 84.6 8.4 76 76-161 14-94 (188)
346 2x1w_L Vascular endothelial gr 99.1 9.9E-11 3.4E-15 88.0 6.5 69 73-152 15-87 (213)
347 1qfw_M FV, antibody (anti beta 99.1 2.9E-10 9.8E-15 77.3 8.2 77 72-152 8-94 (108)
348 2coq_A NEW antigen receptor va 99.1 3.2E-10 1.1E-14 77.1 8.3 74 73-150 8-87 (108)
349 1fnl_A Low affinity immunoglob 99.1 3.6E-10 1.2E-14 82.3 9.1 74 70-161 12-87 (175)
350 2dru_A Chimera of CD48 antigen 99.1 4E-10 1.4E-14 83.4 9.4 84 74-160 8-102 (180)
351 1eaj_A Coxsackie virus and ade 99.1 3.9E-10 1.3E-14 77.0 8.6 78 74-152 14-112 (126)
352 3bn9_D E2 FAB heavy chain; ant 99.1 3E-10 1E-14 88.9 9.0 131 14-152 4-217 (257)
353 2e27_L Anti-ciguatoxin antibod 99.1 3.9E-10 1.3E-14 78.4 8.6 86 73-162 11-110 (119)
354 1c1e_H Catalytic antibody 1E9 99.1 3.9E-10 1.3E-14 84.6 9.3 78 73-152 8-102 (219)
355 2gi7_A GPVI protein; IG-like d 99.1 3.4E-10 1.2E-14 83.3 8.8 67 75-160 17-88 (184)
356 1c5d_H Monoclonal antibody aga 99.1 5.3E-10 1.8E-14 84.2 10.0 129 15-153 5-204 (215)
357 4gjt_B Poliovirus receptor-rel 99.1 2.5E-10 8.6E-15 79.5 7.6 86 74-160 9-115 (123)
358 3d9a_L Light chain of hyhel10 99.1 2.1E-10 7.1E-15 85.5 7.5 77 72-152 8-94 (213)
359 2vr9_A Roundabout 1, ROBO; imm 99.1 2.4E-10 8.1E-15 85.3 7.8 76 69-152 13-92 (217)
360 3grw_A Fibroblast growth facto 99.1 2.2E-10 7.6E-15 86.6 7.6 72 74-152 24-95 (241)
361 4fmk_A Poliovirus receptor-rel 99.1 6.9E-10 2.3E-14 82.0 10.0 78 74-152 10-106 (225)
362 1f97_A Junction adhesion molec 99.1 3.1E-10 1.1E-14 83.8 8.0 75 72-152 8-88 (212)
363 1ypz_E T cell receptor delta, 99.1 3E-09 1E-13 80.1 13.6 127 12-152 3-196 (207)
364 1mqk_L Antibody 7E2 FV fragmen 99.1 4.1E-10 1.4E-14 78.3 8.1 87 73-163 9-110 (120)
365 1i8k_A Epidermal growth factor 99.1 3.3E-10 1.1E-14 76.9 7.2 76 73-152 9-94 (107)
366 3uto_A Twitchin; kinase, muscl 99.1 3.3E-10 1.1E-14 98.3 9.0 84 67-161 484-573 (573)
367 4f80_A Butyrophilin subfamily 99.1 4.1E-10 1.4E-14 85.0 8.5 77 75-152 14-106 (226)
368 1zvo_C Myeloma immunoglobulin 99.1 8.1E-10 2.8E-14 94.0 11.1 129 17-152 304-490 (512)
369 2or8_A Hepatitis A virus cellu 99.1 6.3E-10 2.2E-14 75.9 8.5 87 74-163 6-112 (116)
370 1moe_A Anti-CEA MAB T84.66; an 99.1 5.8E-10 2E-14 84.6 9.2 86 72-161 8-111 (240)
371 2vsd_A CHIR AB1; immune system 99.1 1.8E-10 6E-15 78.4 5.6 64 76-152 15-79 (105)
372 3k0w_A Mucosa-associated lymph 99.1 7.2E-10 2.5E-14 83.4 9.5 69 67-152 20-88 (218)
373 4acp_A IG gamma-1 chain C regi 99.1 1.8E-10 6.3E-15 89.4 6.3 123 22-152 36-216 (240)
374 1lk3_L 9D7 light chain; antige 99.1 4.1E-10 1.4E-14 84.0 8.0 77 72-152 7-93 (210)
375 3r06_A Anti-mouse CD3epsilon a 99.1 6.1E-10 2.1E-14 82.9 8.8 85 72-160 8-106 (213)
376 2pet_A Lutheran blood group gl 99.1 3.4E-10 1.2E-14 84.9 7.4 76 73-152 8-100 (231)
377 2ny1_B T-cell surface glycopro 99.1 3.1E-10 1.1E-14 82.9 6.9 81 75-160 5-98 (184)
378 1uct_A Immunoglobulin alpha FC 99.1 4.2E-10 1.4E-14 85.6 7.7 67 75-152 18-87 (218)
379 2jju_A Signal regulatory prote 99.1 1.1E-09 3.7E-14 76.6 9.3 75 74-151 12-96 (127)
380 1gsm_A Madcam-1, mucosal addre 99.0 5.7E-10 1.9E-14 85.5 8.4 78 68-160 8-93 (210)
381 2ywz_A NEW antigen receptor va 99.0 4.4E-10 1.5E-14 76.9 7.0 75 72-150 7-87 (111)
382 2yz1_A Tyrosine-protein phosph 99.0 5.1E-10 1.8E-14 77.1 7.3 76 74-152 16-101 (120)
383 3s96_B 3B5H10 FAB light chain; 99.0 8.6E-10 3E-14 82.2 9.1 75 74-152 9-98 (218)
384 2fbo_J V1V2;, variable region- 99.0 3.6E-10 1.2E-14 85.7 7.1 78 74-152 11-113 (250)
385 2ghw_B Anti-SARS SCFV antibody 99.0 7.7E-10 2.6E-14 84.4 8.9 87 73-161 10-118 (247)
386 1dr9_A B7-1 (CD80), T lymphocy 99.0 3.9E-10 1.3E-14 83.4 7.0 76 75-152 4-88 (201)
387 3mj6_A Junctional adhesion mol 99.0 8.6E-10 2.9E-14 84.8 9.1 81 71-152 11-107 (268)
388 3mj8_L Stimulatory hamster ant 99.0 1.1E-09 3.7E-14 81.6 9.4 75 74-152 9-93 (213)
389 2wv3_A Neuroplastin; igcam, me 99.0 4.8E-10 1.6E-14 82.2 7.2 68 73-151 10-78 (190)
390 4dzb_B Vbeta2 (MAIT T cell rec 99.0 7.1E-10 2.4E-14 84.6 8.3 76 72-151 8-99 (246)
391 2r15_A Myomesin-1; sarcomeric 99.0 5.4E-10 1.8E-14 82.7 7.3 64 79-152 16-82 (212)
392 3d9a_H Heavy chain of hyhel10 99.0 6.4E-10 2.2E-14 83.0 7.7 88 72-161 7-112 (210)
393 1sq2_N Novel antigen receptor; 99.0 8.5E-10 2.9E-14 75.8 7.7 76 72-151 7-88 (113)
394 1zvo_C Myeloma immunoglobulin 99.0 1.2E-09 4.2E-14 92.8 10.3 68 79-152 311-384 (512)
395 1f2q_A High affinity immunoglo 99.0 5.7E-10 1.9E-14 81.2 7.1 75 69-161 8-84 (176)
396 1jbj_A CD3 epsilon and gamma e 99.0 5.1E-10 1.8E-14 82.7 6.9 58 76-152 10-68 (186)
397 3noi_A Natural cytotoxicity tr 99.0 5.7E-10 1.9E-14 77.3 6.6 77 73-151 15-103 (120)
398 1j05_L T84.66 antibody, anti-C 99.0 1.2E-09 3.9E-14 74.5 8.1 75 73-151 9-97 (111)
399 1pew_A JTO2, A lambda-6 type i 99.0 1.9E-09 6.7E-14 73.2 9.2 76 72-151 7-94 (109)
400 3sob_L Antibody light chain; b 99.0 6.4E-10 2.2E-14 83.8 7.3 85 72-160 31-129 (237)
401 3esu_F Antibody 14B7* light ch 99.0 9.2E-10 3.2E-14 84.1 8.2 85 73-161 12-110 (250)
402 1ugn_A LIR1, leukocyte immunog 99.0 2.2E-10 7.5E-15 84.9 4.5 77 75-161 14-96 (198)
403 3auv_A SC-DSFV derived from th 99.0 8.1E-10 2.8E-14 86.3 8.1 86 72-161 19-118 (276)
404 1u3h_A T-cell receptor alpha-c 98.6 3.3E-11 1.1E-15 82.4 0.0 75 73-151 7-93 (110)
405 1nkr_A P58-CL42 KIR; inhibitor 99.0 5.4E-10 1.9E-14 83.2 6.7 68 75-151 17-85 (201)
406 1ypz_F T-cell receptor gamma c 99.0 6.4E-09 2.2E-13 79.2 12.8 130 14-152 5-214 (230)
407 1svz_A Immunoglobulin;, single 99.0 1.5E-09 5.2E-14 82.9 9.3 86 72-161 8-112 (247)
408 1q0x_L FAB 9B1, light chain; a 99.0 9.2E-10 3.1E-14 82.0 7.8 85 72-160 7-108 (212)
409 3uzq_A Anti-dengue MAB 4E11; d 99.0 1.8E-09 6.2E-14 82.9 9.7 89 71-161 7-116 (253)
410 1neu_A Myelin P0 protein; stru 99.0 2E-09 6.8E-14 74.0 8.9 87 74-161 8-118 (124)
411 2znx_A SCFV; fluorotryptohpan, 99.0 1.1E-09 3.8E-14 83.8 8.4 85 72-160 8-106 (242)
412 3gkz_A Anti-methamphetamine si 99.0 1.5E-09 5.1E-14 83.5 9.1 78 72-151 15-108 (257)
413 2d9c_A Signal-regulatory prote 99.0 1.3E-09 4.4E-14 76.9 7.9 75 74-151 17-101 (136)
414 2v9r_A Roundabout homolog 1; p 99.0 1.5E-09 5E-14 80.2 8.6 79 68-152 12-95 (212)
415 1eeq_A Kappa-4 immunoglobulin 99.0 1.7E-09 6E-14 74.0 8.3 76 73-152 9-100 (114)
416 2edo_A CD48 antigen; beta-sand 99.0 1.8E-09 6.2E-14 75.1 8.4 75 75-152 14-96 (121)
417 4ffy_L DENV1-E111 single chain 99.0 2.1E-09 7.2E-14 75.1 8.7 86 73-162 9-112 (126)
418 3jz7_A MCAR, CAR, coxsackievir 99.0 1.8E-09 6.1E-14 79.6 8.7 78 74-152 9-107 (214)
419 1nqb_A Single-chain antibody f 99.0 1.5E-09 5.2E-14 84.0 8.7 78 72-151 7-101 (256)
420 3sbw_C Programmed cell death 1 99.0 2.3E-09 7.8E-14 80.0 9.3 84 75-160 11-113 (222)
421 3tf7_C 42F3 MUT7 SCFV (42F3 al 99.0 8E-10 2.7E-14 85.3 6.9 86 73-162 11-116 (256)
422 2wbj_D OB TCR; transmembrane, 99.0 4.1E-09 1.4E-13 82.4 11.1 75 72-150 31-121 (279)
423 3nl4_H Antigen binding fragmen 99.0 1.8E-09 6.3E-14 80.9 8.7 88 72-161 6-114 (215)
424 3nfj_J T cell receptor beta ch 99.0 1.2E-09 4.2E-14 83.3 7.8 75 72-150 8-95 (245)
425 1nfd_E H57 FAB; complex (immun 99.0 1.1E-09 3.7E-14 81.6 7.3 75 72-150 6-90 (212)
426 1q9r_B S25-2 FAB (IGG1K) heavy 99.0 1.5E-09 5.1E-14 81.6 8.1 78 72-151 7-103 (222)
427 3r0n_A Poliovirus receptor-rel 99.0 5.8E-10 2E-14 77.5 5.4 77 74-151 11-115 (128)
428 4ei6_B Vbeta16 XV19 type II na 99.0 4.6E-09 1.6E-13 79.9 10.7 74 72-150 9-97 (245)
429 4frw_A Poliovirus receptor-rel 99.0 1.9E-09 6.6E-14 79.2 8.3 77 74-152 8-102 (218)
430 1pz5_B Heavy chain of FAB (SYA 99.0 2.3E-09 7.9E-14 80.5 8.8 88 72-161 7-119 (220)
431 1op3_H FAB 2G12, heavy chain; 99.0 2.9E-09 9.8E-14 80.7 9.4 79 72-152 7-102 (225)
432 1nbq_A JAM, junctional adhesio 99.0 5.9E-10 2E-14 82.1 5.4 74 73-152 12-91 (209)
433 1f3r_B FV antibody fragment; I 99.0 1.2E-09 4.1E-14 84.4 7.4 78 72-151 7-100 (257)
434 1xau_A B- and T-lymphocyte att 99.0 3.6E-09 1.2E-13 73.0 8.8 85 74-162 23-116 (122)
435 2or7_A T-cell immunoglobulin a 99.0 1.4E-09 4.8E-14 74.4 6.9 90 73-164 5-112 (115)
436 4hwn_A FC receptor-like A; FCR 99.0 2.3E-09 8E-14 73.1 8.0 61 76-152 18-83 (108)
437 3bkj_L WO2 IGG2A FAB fragment 99.0 1.5E-09 5E-14 83.4 7.7 77 72-152 41-132 (252)
438 1zox_A CLM-1; IG-superfamily, 99.0 2E-09 6.7E-14 73.4 7.5 88 73-163 9-111 (113)
439 1i3g_L Antibody FV fragment; a 99.0 1.6E-09 5.5E-14 74.0 7.0 75 74-152 13-97 (111)
440 3qib_D 2B4 beta chain; IG doma 99.0 2.4E-09 8.1E-14 83.1 8.9 73 73-150 35-122 (270)
441 3pl6_D MBP peptide / T-cell re 99.0 1.3E-09 4.6E-14 84.3 7.4 84 73-161 34-137 (268)
442 1mq8_A ICAM-1, intercellular a 99.0 3.6E-09 1.2E-13 84.7 10.1 127 13-152 2-165 (291)
443 1mju_H Immunoglobulin MS6-12; 99.0 2E-09 6.7E-14 81.9 8.2 85 73-161 8-115 (227)
444 1za6_B IGG heavy chain; immuno 99.0 1.4E-09 4.9E-14 87.3 7.7 87 73-161 8-114 (344)
445 3umt_A SCFV heavy chain and li 99.0 1.6E-09 5.4E-14 83.4 7.7 87 73-161 10-120 (256)
446 2xzc_L FAB A.17 light chain; i 99.0 1.7E-09 5.9E-14 80.8 7.7 78 72-152 7-95 (216)
447 3ux9_B SCFV antibody; five hel 99.0 1.3E-09 4.3E-14 83.8 7.0 76 74-151 11-96 (256)
448 3ry4_A Low affinity immunoglob 99.0 2.7E-09 9.3E-14 76.6 8.3 73 71-161 10-84 (170)
449 2q87_A CMRF35-H antigen; all-b 98.9 2.7E-09 9.2E-14 72.5 7.8 87 74-163 5-109 (110)
450 2zg1_A Sialic acid-binding IG- 98.9 1.9E-09 6.5E-14 80.1 7.5 80 72-152 7-105 (214)
451 2p1y_A Bispecific alpha/beta T 98.9 2.8E-09 9.5E-14 80.7 8.4 76 72-152 7-96 (238)
452 3q5y_A TCR N15 beta; IG, T cel 98.9 4.8E-09 1.6E-13 79.7 9.8 72 73-149 10-95 (240)
453 2qhl_A Novel immune-type recep 98.9 2.7E-09 9.2E-14 72.8 7.5 73 75-151 9-98 (111)
454 2i24_N NEW antigen receptor PB 98.9 7.7E-09 2.6E-13 72.2 9.9 74 73-150 8-87 (121)
455 3juy_B 3B3 single chain varian 98.9 2.8E-09 9.7E-14 82.0 8.3 80 70-151 11-107 (256)
456 1qok_A MFE-23 recombinant anti 98.9 3E-09 1E-13 83.4 8.5 80 71-152 32-128 (282)
457 1c5d_H Monoclonal antibody aga 98.9 4.6E-09 1.6E-13 79.0 9.2 88 72-161 7-116 (215)
458 1sy6_A T-cell surface glycopro 98.9 2E-09 6.9E-14 80.9 7.1 65 78-160 16-80 (204)
459 2fbj_H IGA-kappa J539 FAB (hea 98.9 5.6E-09 1.9E-13 78.9 9.6 88 72-161 7-117 (220)
460 1tvd_A T cell receptor, ES204 98.9 3.2E-09 1.1E-13 72.8 7.5 76 73-151 8-98 (116)
461 3qhz_H Human monoclonal antibo 98.9 9.4E-09 3.2E-13 78.0 10.8 68 78-152 145-216 (232)
462 1fo0_B Protein (BM3.3 T cell r 98.9 5.8E-09 2E-13 71.4 8.6 74 74-151 10-96 (112)
463 1p6f_A NKP46, natural cytotoxi 98.9 3.8E-09 1.3E-13 81.8 8.4 76 76-161 17-97 (242)
464 1dlf_L Anti-dansyl immunoglobu 98.9 6.1E-09 2.1E-13 71.1 8.5 79 73-152 9-99 (113)
465 3o3u_N Maltose-binding peripla 98.9 1.3E-09 4.3E-14 93.1 6.1 75 75-152 376-455 (581)
466 3tv3_L PGT128 light chain, IG 98.9 3.9E-09 1.3E-13 78.5 8.0 82 74-161 9-105 (211)
467 3bn3_B ICAM-5, intercellular a 98.9 3.4E-08 1.2E-12 74.9 12.9 142 14-165 6-190 (196)
468 3tv3_H PGT128 heavy chain, IG 98.9 6.8E-09 2.3E-13 79.6 9.2 67 79-152 154-224 (239)
469 3to4_D NKT vbeta2 (mouse varia 98.9 7.5E-09 2.6E-13 79.7 9.4 75 73-151 9-96 (253)
470 4i0k_A CD276 antigen; immunogl 98.9 1.6E-09 5.6E-14 80.9 5.5 77 75-152 5-95 (222)
471 3eow_R Poliovirus receptor; im 98.9 1.1E-09 3.9E-14 82.1 4.4 78 74-152 8-101 (221)
472 3bae_H WO2 IGG2A FAB fragment 98.9 5.1E-09 1.8E-13 79.4 8.0 77 72-152 7-103 (228)
473 3bj9_1 Immunoglobulin IOTA cha 98.9 1.4E-08 4.8E-13 69.5 9.5 87 74-161 7-113 (116)
474 1fo0_A Protein (BM3.3 T cell r 98.9 7.5E-09 2.6E-13 71.1 8.1 74 74-150 9-95 (116)
475 2z35_A T-cell receptor alpha-c 98.9 6.3E-09 2.2E-13 71.0 7.7 73 73-149 8-92 (112)
476 1oaq_L Light chain; antibody, 98.9 7.9E-09 2.7E-13 71.4 8.3 87 75-162 10-110 (120)
477 3omz_A Human vdelta1 gamma del 98.9 6.6E-09 2.3E-13 80.0 8.7 77 72-152 9-102 (259)
478 2gjj_A A21 single-chain antibo 98.9 8.9E-09 3E-13 80.1 9.5 86 72-161 12-117 (264)
479 1hxm_A Gamma-delta T-cell rece 98.9 5.1E-08 1.7E-12 74.9 13.6 129 13-152 4-197 (229)
480 3u2s_H PG9 heavy chain; greek 98.9 1.1E-08 3.6E-13 79.3 9.8 67 79-152 155-225 (248)
481 3m8o_H Immunoglobulin A1 heavy 98.9 1.1E-08 3.9E-13 76.8 9.7 88 72-161 7-118 (221)
482 1ypz_E T cell receptor delta, 98.9 6.6E-09 2.2E-13 78.2 8.3 74 73-151 9-93 (207)
483 1nko_A Sialic acid binding IG- 98.9 1E-08 3.6E-13 71.7 8.8 90 72-162 13-127 (132)
484 1dee_B IGM RF 2A2; FAB-IBP com 98.9 6.6E-09 2.2E-13 78.6 8.3 78 72-151 7-101 (223)
485 1hxm_B Gamma-delta T-cell rece 98.9 9.1E-09 3.1E-13 78.8 9.1 77 73-151 9-102 (242)
486 1bec_A 14.3.D T cell antigen r 98.9 9.6E-09 3.3E-13 78.4 9.1 75 72-151 6-94 (238)
487 3rrq_A Protein PD-1, programme 98.9 4.3E-08 1.5E-12 68.8 11.7 89 72-163 8-116 (129)
488 2ifg_A High affinity nerve gro 98.9 7.8E-10 2.7E-14 89.1 2.8 70 73-152 166-236 (347)
489 2xqy_G A13-D6.3 monoclonal ant 98.9 7.5E-09 2.6E-13 80.8 8.3 85 73-161 14-123 (261)
490 2yc1_B Single chain antibody f 98.9 9E-09 3.1E-13 74.4 8.0 85 73-161 24-122 (146)
491 3pv7_A B7-H6, IG-like domain-c 98.9 1.1E-08 3.6E-13 78.1 8.8 71 74-152 12-105 (248)
492 3moq_A NEW antigen receptor va 98.8 8.9E-09 3E-13 72.6 7.7 76 73-152 8-89 (126)
493 3b5h_A Cervical EMMPRIN, HAB18 98.8 1.1E-08 3.7E-13 74.3 8.2 71 75-160 8-80 (184)
494 3kg5_A B-cell antigen receptor 98.8 1.9E-08 6.5E-13 71.6 8.9 83 73-162 26-119 (134)
495 1x9q_A SCFV, 4M5.3 anti-fluore 98.8 6.5E-09 2.2E-13 80.7 7.0 86 72-161 22-126 (268)
496 1b6u_A KIR2DL3, P58 killer cel 98.8 5.4E-09 1.8E-13 81.8 6.5 68 75-151 16-84 (257)
497 3fku_X Neutralizing antibody F 98.8 3.8E-09 1.3E-13 82.9 5.6 78 72-151 7-101 (280)
498 3bqu_C 3H6 FAB light chain; be 98.8 6.6E-10 2.3E-14 84.0 0.9 77 72-152 30-116 (233)
499 2atp_B T-cell surface glycopro 98.8 2.7E-08 9.1E-13 68.0 8.9 76 73-151 6-101 (115)
500 3sob_H Antibody heavy chain, l 98.8 1.3E-08 4.6E-13 78.6 8.1 133 10-152 23-238 (256)
No 1
>2v44_A NCAM2, neural cell adhesion molecule 2; phosphorylation, immunoglobulin domain, IG, membrane, homphilic, glycoprotein, transmembrane; 1.77A {Homo sapiens} PDB: 2xy2_A* 2vaj_A
Probab=99.86 E-value=6.1e-21 Score=140.75 Aligned_cols=131 Identities=19% Similarity=0.392 Sum_probs=101.6
Q ss_pred ceeeEEeEEEEEeCCcEEEEeecCCCCCCcceeeEEeeCCCceeeecCC--------c-eE--------EEeeeEEEecC
Q psy12724 12 YYEAQVYDVFVIKGNAAVFKCNLPSFVSDHLDVVSWADTDGGQYQIDNQ--------D-FV--------VSQSYTVNIMD 74 (167)
Q Consensus 12 ~~~~~~~~~~v~~G~~~~l~C~a~~~~~~~~~~i~W~k~~~~~~~~~~~--------~-~v--------~~g~y~c~~~~ 74 (167)
+|...+.+..+.+|+++.|.|.+.+.|. .+.|+|+++..+..... . .+ .+|.|+|.+.+
T Consensus 4 ~~~~~~~~~~v~~G~~v~L~C~~~~~p~----~v~W~~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~~~~ 79 (189)
T 2v44_A 4 QVTISLSKVELSVGESKFFTCTAIGEPE----SIDWYNPQGEKIISTQRVVVQKEGVRSRLTIYNANIEDAGIYRCQATD 79 (189)
T ss_dssp EEEESCSEEEEETTCCEEEEEEEEECCS----EEEEECTTSCBCCCCSSEEEEEETTEEEEEECSCCGGGCEEEEEEEEC
T ss_pred EEEecCCceEEecCCcEEEEEEeecCCe----eEEEEeCCCCccCCCceEEEECCCCeEEEEEccCCcccCeEEEEEEEe
Confidence 4677889999999999999999987754 59999966655533211 0 11 27999998742
Q ss_pred --------------------------eEEEeCCcEEEEeeeCCccCCcceeEEEEeCCCeeeEEeeeecCCceEEEccCC
Q psy12724 75 --------------------------EHVLKGNSAVLKCHIPSFVADYVAVESWISDQGEELFVDMTESTDGKYLVLPSG 128 (167)
Q Consensus 75 --------------------------~~v~~G~~a~l~C~~~~~~~~p~p~i~W~k~~~~~l~~~~~~~~~~r~~~~~~g 128 (167)
..+.+|+++.|.|.+.+ .|.|.++|+|++ ..+.. ..+.++.+..++
T Consensus 80 ~~g~~~~~~~~l~v~~~p~~~~~~~~~~~~~g~~~~l~C~~~g---~p~p~v~W~~~~-~~~~~----~~~~~~~~~~~~ 151 (189)
T 2v44_A 80 AKGQTQEATVVLEIYQKLTFREVVSPQEFKQGEDAEVVCRVSS---SPAPAVSWLYHN-EEVTT----ISDNRFAMLANN 151 (189)
T ss_dssp TTSCEEEEEEEEEEECCCEEESCCCSEEEETTSCEEECCEEEC---SSCCEEEEEEEC---CEE----CCCTTEEECTTS
T ss_pred CCCCcEEEEEEEEEecCCceeecCCcEEEeCCCCEEEEEEECc---CCCCcEEEEECC-cEEec----cCCCCEEEecCC
Confidence 34578999999999984 588899999998 45532 146788888899
Q ss_pred eEEEeecCcCCCCcceEEEeeecCcce
Q psy12724 129 ELHIRDVGPEDGYKSYQCRTKHRLTGE 155 (167)
Q Consensus 129 ~L~I~~v~~~D~~G~Y~C~a~n~~~~~ 155 (167)
.|.|.+++.+|+ |.|+|.|.|...++
T Consensus 152 ~L~i~~v~~~d~-G~Y~C~a~n~~~~~ 177 (189)
T 2v44_A 152 NLQILNINKSDE-GIYRCEGRVEARGE 177 (189)
T ss_dssp CEEETTCCGGGC-EEEEEEEEETTTTE
T ss_pred cEEEEEcCcccC-eEEEEEEEccccCc
Confidence 999999999999 99999999998444
No 2
>1epf_A NCAM, protein (neural cell adhesion molecule); immunoglobulin fold, glycoprotein; 1.85A {Rattus norvegicus} SCOP: b.1.1.4 b.1.1.4 PDB: 2ncm_A 3ncm_A
Probab=99.86 E-value=6.7e-21 Score=140.55 Aligned_cols=134 Identities=19% Similarity=0.390 Sum_probs=104.1
Q ss_pred ceeeEEeEEEEEeCCcEEEEeecCCCCCCcceeeEEeeCCCceeeecCCc-----------eE--------EEeeeEEEe
Q psy12724 12 YYEAQVYDVFVIKGNAAVFKCNLPSFVSDHLDVVSWADTDGGQYQIDNQD-----------FV--------VSQSYTVNI 72 (167)
Q Consensus 12 ~~~~~~~~~~v~~G~~~~l~C~a~~~~~~~~~~i~W~k~~~~~~~~~~~~-----------~v--------~~g~y~c~~ 72 (167)
.+...|.+..+.+|+++.|.|.+.+.+.. +.+.|++.++..+..+..+ .+ ..|.|+|.+
T Consensus 4 ~v~~~p~~~~v~~G~~v~l~C~~~~~~~~--~~v~W~~~~g~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~~ 81 (191)
T 1epf_A 4 QVDIVPSQGEISVGESKFFLCQVAGDAKD--KDISWFSPNGEKLSPNQQRISVVWNDDDSSTLTIYNANIDDAGIYKCVV 81 (191)
T ss_dssp CEEEESSSEEEETTCCEEEEEEECCCSCC--CEEEEECTTSCEECCBSSSEEEEEEETTEEEEEECSCCGGGCEEEEEEE
T ss_pred EEEecCCCcEEcCCCCEEEEEECCCCCCC--ceEEEEeCCCccccCCCCeEEEEECCCCceEEEEccCCcccCEEEEEEE
Confidence 46788899999999999999999987632 5799999656665532211 11 279999986
Q ss_pred cC--------------------------eEEEeCCcEEEEeeeCCccCCcceeEEEEeCCCeeeEEeeeecCCceEEEcc
Q psy12724 73 MD--------------------------EHVLKGNSAVLKCHIPSFVADYVAVESWISDQGEELFVDMTESTDGKYLVLP 126 (167)
Q Consensus 73 ~~--------------------------~~v~~G~~a~l~C~~~~~~~~p~p~i~W~k~~~~~l~~~~~~~~~~r~~~~~ 126 (167)
.+ ..+.+|+++.|.|.+.+ .|.|.++|+|++ ..+.. ..+.++.+..
T Consensus 82 ~~~~~~~~~~~~~l~v~~~p~~~~~~~~~~~~~g~~~~l~C~~~g---~p~~~v~W~~~~-~~~~~----~~~~~~~~~~ 153 (191)
T 1epf_A 82 TAEDGTQSEATVNVKIFQKLMFKNAPTPQEFKEGEDAVIVCDVVS---SLPPTIIWKHKG-RDVIL----KKDVRFIVLS 153 (191)
T ss_dssp EETTTEEEEEEEEEEEECCSEEEECCSSEECCTTSCEEECCEEEC---SSCCEEEEEETT-EEGGG----GCCTTEEECT
T ss_pred EcCCCcceEEEEEEEeecCceEecCCCcEeecCCCeEEEEEEECC---CCCCEEEEEECC-EEeec----cCCceEEEec
Confidence 32 23467999999999984 588999999997 45422 2456888888
Q ss_pred CCeEEEeecCcCCCCcceEEEeeecCcceE
Q psy12724 127 SGELHIRDVGPEDGYKSYQCRTKHRLTGET 156 (167)
Q Consensus 127 ~g~L~I~~v~~~D~~G~Y~C~a~n~~~~~~ 156 (167)
++.|.|.+++.+|+ |.|+|.|.|...++.
T Consensus 154 ~~~L~i~~~~~~d~-G~Y~C~a~n~~~~~~ 182 (191)
T 1epf_A 154 NNYLQIRGIKKTDE-GTYRCEGRILARGEI 182 (191)
T ss_dssp TSCEEETTCCGGGC-EEEEEEEEEGGGTEE
T ss_pred CCeEEECCCChhhC-EEEEEEEEEecceeE
Confidence 99999999999999 999999999885544
No 3
>4fa8_A Secreted protein BARF1; immunoglobulin-like domains, 4-helix bundle fold, viral PROT cytokine complex; HET: NAG BMA; 2.20A {Human herpesvirus 4} PDB: 2ch8_A* 3uez_A* 4adf_A* 4adq_A*
Probab=99.84 E-value=1.3e-20 Score=143.54 Aligned_cols=128 Identities=14% Similarity=0.159 Sum_probs=84.1
Q ss_pred eEEEEEeCCcEEEEeecCCCCCCcceeeEEeeCCCcee---e---------e------------cCCc-eE--------E
Q psy12724 18 YDVFVIKGNAAVFKCNLPSFVSDHLDVVSWADTDGGQY---Q---------I------------DNQD-FV--------V 64 (167)
Q Consensus 18 ~~~~v~~G~~~~l~C~a~~~~~~~~~~i~W~k~~~~~~---~---------~------------~~~~-~v--------~ 64 (167)
+++++..|+++.|.|......+.+.+.|+|+|++.... . . +... .+ .
T Consensus 1 q~Vta~~Ge~v~L~C~~~~v~~~p~~~V~W~k~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~I~~v~~~D 80 (203)
T 4fa8_A 1 QAVTAFLGERVTLTSYWRRVSLGPEIEVSWFKLGPGEEQVLIGRMHHDVIFIEWPFRGFFDIHRSANTFFLVVTAANISH 80 (203)
T ss_dssp -CCEEETTCCEEEEEECSSTTCSTTSEEEEEEEETTTEEEEEEEEETTEEEECGGGBTTEEEEEETTEEEEEESSCCGGG
T ss_pred CCeEEEcCCCEEEEeeeeccCCCCCcEEEEEEcCCCcceEEEEecCCceEEeeccccceEEEEEcCCEEEEEEccCCHHH
Confidence 45789999999999964332221135799999743110 0 0 0000 11 2
Q ss_pred EeeeEEEecC-------------------------eEEEeCCcEEEEeeeCCccCCcceeEEEEeCCCeeeEEeeeecCC
Q psy12724 65 SQSYTVNIMD-------------------------EHVLKGNSAVLKCHIPSFVADYVAVESWISDQGEELFVDMTESTD 119 (167)
Q Consensus 65 ~g~y~c~~~~-------------------------~~v~~G~~a~l~C~~~~~~~~p~p~i~W~k~~~~~l~~~~~~~~~ 119 (167)
+|.|+|.+.+ ..+.+|+++.|.|.+.| .|.|.|+|+|+++....+. ..+
T Consensus 81 ~G~Y~C~a~n~~g~~~~~~~l~V~~p~~~~~~~~~~~v~~g~~~~l~C~~~G---~P~P~v~W~~~~~~~~~~~---~~~ 154 (203)
T 4fa8_A 81 DGNYLCRMKLGETEVTKQEHLSVVKPLTLSVHSERSQFPDFSVLTVTCTVNA---FPHPHVQWLMPEGVEPAPT---AAN 154 (203)
T ss_dssp CEEEEEEEEETTEEEEEEEEEEEEEEEEEEEEEEECCSSCSCCEEEEEEEEE---ESCCEEEECCC--------------
T ss_pred CeEEEEEEEcCCCcEEEEEEEEecCCceeeecceeEEEcCCCEEEEEEEcCC---CCCCEEEEEECCeeecCcc---ccc
Confidence 7999998743 12347999999999984 5999999998875433332 145
Q ss_pred ceEEEccCCeEEE---eecCcCCCCcceEEEeeecC
Q psy12724 120 GKYLVLPSGELHI---RDVGPEDGYKSYQCRTKHRL 152 (167)
Q Consensus 120 ~r~~~~~~g~L~I---~~v~~~D~~G~Y~C~a~n~~ 152 (167)
+|+.+..+|.|.| .+++.+|+ |.|+|+|+|..
T Consensus 155 ~r~~~~~~g~l~il~i~~v~~~D~-G~YtC~A~N~~ 189 (203)
T 4fa8_A 155 GGVMKEKDGSLSVAVDLSLPKPWH-LPVTCVGKNDK 189 (203)
T ss_dssp -CCEECTTSCEEEEEEEEECSSCC-CCEEEEEESSS
T ss_pred ceEEEeCCCCEEEEEECCCCHHHC-EEEEEEEEcCC
Confidence 7888889997665 59999998 99999999998
No 4
>3rbs_A Myomesin-1; immunoglobulin C-SET domain, contractIle protein; 1.85A {Homo sapiens}
Probab=99.84 E-value=3.8e-20 Score=140.88 Aligned_cols=127 Identities=18% Similarity=0.228 Sum_probs=90.4
Q ss_pred eeeceeeEEeEEEEEeCCcEEEEeecCC-CCCCcceeeEEeeCCCceeeec--------C-Cc--eE--------EEeee
Q psy12724 9 ISQYYEAQVYDVFVIKGNAAVFKCNLPS-FVSDHLDVVSWADTDGGQYQID--------N-QD--FV--------VSQSY 68 (167)
Q Consensus 9 ~~~~~~~~~~~~~v~~G~~~~l~C~a~~-~~~~~~~~i~W~k~~~~~~~~~--------~-~~--~v--------~~g~y 68 (167)
+.++|.... +..|.+|+.+.|.|.+.+ .|. |.|+|+|++. .+.++ . .. .+ .+|.|
T Consensus 2 ~~p~~~~~~-~~~v~eg~~v~l~c~~~~~~P~---p~i~W~kng~-~l~~~~~~~~~~~~~~g~~~L~I~~v~~~D~G~Y 76 (207)
T 3rbs_A 2 IDPFTKSEL-AVEILEKGQVRFWMQAEKLSGN---AKVNYIFNEK-EIFEGPKYKMHIDRNTGIIEMFMEKLQDEDEGTY 76 (207)
T ss_dssp ----CCEEE-EEEECGGGCEEEEEECSCCCSC---CEEEEEETTE-EECSSSSCEEEECTTTCEEEEEESCCCGGGCEEE
T ss_pred CCCeeecCC-ceEEEeCCeEEEEEEEecCCCC---CEEEEEECCE-ECccCCCEEEEEeCCCCEEEEEECCCChhhCEEE
Confidence 345566544 689999999999999965 343 5899999854 44321 1 01 12 27999
Q ss_pred EEEecC-------------------------------------------eEEEeCCcEEEEeeeCCccCC-cceeEEEEe
Q psy12724 69 TVNIMD-------------------------------------------EHVLKGNSAVLKCHIPSFVAD-YVAVESWIS 104 (167)
Q Consensus 69 ~c~~~~-------------------------------------------~~v~~G~~a~l~C~~~~~~~~-p~p~i~W~k 104 (167)
+|.+.| ..+.+|+++.|.|.+. |. |.|.++|+|
T Consensus 77 ~C~a~Ng~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~~~~~~~~~v~~g~~v~l~C~v~---g~~P~p~i~W~k 153 (207)
T 3rbs_A 77 TFQLQDGKATNHSTVVLVGDVFKKLQKEAEFQRQEWIRKQGPHFVEYLSWEVTGECNVLLKCKVA---NIKKETHIVWYK 153 (207)
T ss_dssp EEEEEETTEEEEEEEEECTHHHHHHHHHHHHHHHHHHHHTSSEEEEEEEEEEETTTEEEEEEEEE---SCCTTCEEEEEE
T ss_pred EEEEECCCeEEEEEEEEEccchhhhcccccccccccccCCCCceEecCCcEEcCCCcEEEEEEEe---CCCCCCEEEEEE
Confidence 994321 2456799999999997 55 899999999
Q ss_pred CCCeeeEEeeeecCCceEEEccCC--eEEEeecCcCCCCcceEEEeeecC
Q psy12724 105 DQGEELFVDMTESTDGKYLVLPSG--ELHIRDVGPEDGYKSYQCRTKHRL 152 (167)
Q Consensus 105 ~~~~~l~~~~~~~~~~r~~~~~~g--~L~I~~v~~~D~~G~Y~C~a~n~~ 152 (167)
|+ ..+.+ +.++.. .+| .|.|.+++.+|+ |.|+|.|.|..
T Consensus 154 ~g-~~l~~------~~~~~~-~~~~~~L~I~~v~~~D~-G~Y~C~a~N~~ 194 (207)
T 3rbs_A 154 DE-REISV------DEKHDF-KDGICTLLITEFSKKDA-GIYEVILKDDR 194 (207)
T ss_dssp TT-EEECC------CCCCCC-SSEEEEEEETTCCGGGC-EEEEEEEEETT
T ss_pred CC-EECCC------CCceEc-CCCEEEEEECCCCcccC-EEEEEEEEcCC
Confidence 97 56632 334432 333 699999999999 99999999998
No 5
>2iep_A Muscle-specific kinase receptor; beta-sandwich, signaling protein,transferase; 2.21A {Rattus norvegicus}
Probab=99.83 E-value=7.8e-20 Score=134.67 Aligned_cols=127 Identities=24% Similarity=0.408 Sum_probs=99.2
Q ss_pred eceeeEEeEEEEEeCCcEEEEeecCCCCCCcceeeEEeeCCCceeeecCCc--------eE--------EEeeeEEEecC
Q psy12724 11 QYYEAQVYDVFVIKGNAAVFKCNLPSFVSDHLDVVSWADTDGGQYQIDNQD--------FV--------VSQSYTVNIMD 74 (167)
Q Consensus 11 ~~~~~~~~~~~v~~G~~~~l~C~a~~~~~~~~~~i~W~k~~~~~~~~~~~~--------~v--------~~g~y~c~~~~ 74 (167)
+.|...+.+..+.+|+++.|.|.+.+.+. +.+.|+|++. .+.....+ .+ ..|.|+|.+.+
T Consensus 8 P~i~~~~~~~~~~~G~~v~l~C~~~~~p~---~~i~W~~~~~-~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~~~~ 83 (192)
T 2iep_A 8 PVITTPLETVDALVEEVATFMCAVESYPQ---PEISWTRNKI-LIKLFDTRYSIRENGQLLTILSVEDSDDGIYCCTANN 83 (192)
T ss_dssp EEESSCCCEEEEETTSCEEEECCEEEESC---CEEEEEETTE-ECCTTCTTEEEEGGGTEEEESSCCGGGCEEEEEEEEC
T ss_pred ceeecCccceeeeCCCcEEEEeeCCCCCC---CeEEEEECCE-EccccCccEEEcCCccEEEEcCCCcccCeEEEEEEEc
Confidence 45777888899999999999999987765 3799999853 33221111 11 27999998632
Q ss_pred --------------------------eEEEeCCcEEEEeeeCCccCCcceeEEEEeCCCeeeEEeeeecCCceEEEccCC
Q psy12724 75 --------------------------EHVLKGNSAVLKCHIPSFVADYVAVESWISDQGEELFVDMTESTDGKYLVLPSG 128 (167)
Q Consensus 75 --------------------------~~v~~G~~a~l~C~~~~~~~~p~p~i~W~k~~~~~l~~~~~~~~~~r~~~~~~g 128 (167)
..+.+|+++.|.|.+.+ .|.|.++|+|++ ..+. ...++.+..++
T Consensus 84 ~~~~~~~~~~~l~v~~~p~~~~~~~~~~~~~g~~~~l~C~~~g---~p~~~v~W~~~~-~~~~------~~~~~~~~~~~ 153 (192)
T 2iep_A 84 GVGGAVESCGALQVKMKPKITRPPINVKIIEGLKAVLPCTTMG---NPKPSVSWIKGD-SALR------ENSRIAVLESG 153 (192)
T ss_dssp SSSCCEEEEEEEEEEEEEEEEECCCCEEEETTSCEEECCEEEE---ESCCEEEEEETT-EECC------CCSSEEECTTS
T ss_pred CCCceeEeEEEEEEEeCCccccCCcceEEeCCCcEEEEEEEec---cCCceEEEEeCC-EEcc------CCCcEEEecCC
Confidence 34568999999999974 488899999997 4553 35678888889
Q ss_pred eEEEeecCcCCCCcceEEEeeecC
Q psy12724 129 ELHIRDVGPEDGYKSYQCRTKHRL 152 (167)
Q Consensus 129 ~L~I~~v~~~D~~G~Y~C~a~n~~ 152 (167)
.|.|.+++.+|+ |.|+|.|.|..
T Consensus 154 ~L~i~~~~~~d~-G~Y~C~a~n~~ 176 (192)
T 2iep_A 154 SLRIHNVQKEDA-GQYRCVAKNSL 176 (192)
T ss_dssp CEEESSCCGGGC-EEEEEEEEETT
T ss_pred cEEEecCChhhC-EEEEEEEEcCC
Confidence 999999999999 99999999987
No 6
>2yd6_A PTPRD protein; hydrolase; HET: FLC; 1.35A {Homo sapiens} PDB: 2yd7_A 2yd2_A 2yd3_A 2yd4_A* 2yd8_A* 2yd5_A* 3pxh_A
Probab=99.82 E-value=1.7e-19 Score=135.93 Aligned_cols=142 Identities=15% Similarity=0.245 Sum_probs=101.2
Q ss_pred eeeceeeEEeEEEEEeCCcEEEEeecCCCCCCcceeeEEeeCCCceeeec---------CCce-E---------EEeeeE
Q psy12724 9 ISQYYEAQVYDVFVIKGNAAVFKCNLPSFVSDHLDVVSWADTDGGQYQID---------NQDF-V---------VSQSYT 69 (167)
Q Consensus 9 ~~~~~~~~~~~~~v~~G~~~~l~C~a~~~~~~~~~~i~W~k~~~~~~~~~---------~~~~-v---------~~g~y~ 69 (167)
..+.|...+.+..+.+|+++.|.|.+.+.|. +.+.|+|++. .+..+ +... + ..|.|+
T Consensus 5 ~~P~~~~~p~~~~v~~G~~v~L~C~~~g~p~---~~v~W~k~~~-~~~~~~~~~~~~~~~~~~~L~i~~v~~~~d~G~Y~ 80 (212)
T 2yd6_A 5 TPPRFTRTPVDQTGVSGGVASFICQATGDPR---PKIVWNKKGK-KVSNQRFEVIEFDDGSGSVLRIQPLRTPRDEAIYE 80 (212)
T ss_dssp EEEEEEECCCCEEEETTSCEEEEEEEEEESC---CEEEEEETTE-ECCCTTEEEEEEGGGTEEEEEECSCCTTTTCEEEE
T ss_pred CCCeEEeCcceeEEecCCeEEEEEEEeeCCC---CEEEEEECCc-CCCCCceeEEEEcCCCceEEEEeccCCCCCCeEEE
Confidence 3466888899999999999999999987765 4799999854 22211 0110 1 268999
Q ss_pred EEecC--------------------------------eEEEeCCcEEEEeeeCCccCCcceeEEEEeCCCeeeEEeeeec
Q psy12724 70 VNIMD--------------------------------EHVLKGNSAVLKCHIPSFVADYVAVESWISDQGEELFVDMTES 117 (167)
Q Consensus 70 c~~~~--------------------------------~~v~~G~~a~l~C~~~~~~~~p~p~i~W~k~~~~~l~~~~~~~ 117 (167)
|.+.+ ..+.+|+++.|.|.+. +.|.|.++|+|++ ..+... .
T Consensus 81 C~a~n~~g~~~~~~~l~V~~~~~~~~~~p~~~~~~~~~~~~~g~~v~l~C~~~---g~p~p~v~W~~~g-~~l~~~---~ 153 (212)
T 2yd6_A 81 CVASNNVGEISVSTRLTVLREDQIPRGFPTIDMGPQLKVVERTRTATMLCAAS---GNPDPEITWFKDF-LPVDTS---N 153 (212)
T ss_dssp EEEEETTEEEEEEEEEEEECGGGCCTTCCEEEECCCCEEEETTSCEEEEEEEE---CSSCCEEEEEETT-EEC-------
T ss_pred EEEEcCCCcEEEEEEEEEeccCccCCCcceeecCCcceeEecCCCEEEEEEec---CCCCCeEEEEECC-ccccCc---C
Confidence 97632 2345699999999997 4589999999997 565432 1
Q ss_pred CCceEEEcc---CCeEEEeecCcCCCCcceEEEeeecC----cceEEEeeeC
Q psy12724 118 TDGKYLVLP---SGELHIRDVGPEDGYKSYQCRTKHRL----TGETRLSATK 162 (167)
Q Consensus 118 ~~~r~~~~~---~g~L~I~~v~~~D~~G~Y~C~a~n~~----~~~~~l~~~~ 162 (167)
...++.... .+.|.|.+++.+|+ |.|+|.|.|.. +..+.|.+.+
T Consensus 154 ~~~~~~~~~~~~~~~L~i~~~~~~d~-G~Y~C~a~N~~G~~~s~~a~l~~~~ 204 (212)
T 2yd6_A 154 NNGRIKQLRSESIGALQIEQSEESDQ-GKYECVATNSAGTRYSAPANLYVRG 204 (212)
T ss_dssp --CCEEEEEETTEEEEEECSCCGGGC-EEEEEEEEETTEEEECCCEEEEEEC
T ss_pred CCceEEEEecCCeEEEEEcCCCcccC-EEEEEEEECCCCccccccccEEEEe
Confidence 235565543 36899999999998 99999999987 3345555543
No 7
>2a38_A Titin; Z1Z2, structural protein; 2.00A {Homo sapiens} PDB: 1ya5_A 2f8v_A
Probab=99.82 E-value=1.1e-19 Score=133.99 Aligned_cols=128 Identities=19% Similarity=0.333 Sum_probs=97.8
Q ss_pred eeceeeEEeEEEEEeCCcEEEEeecCCCCCCcceeeEEeeCCCceeeecC----------Cc-eE--------EEeeeEE
Q psy12724 10 SQYYEAQVYDVFVIKGNAAVFKCNLPSFVSDHLDVVSWADTDGGQYQIDN----------QD-FV--------VSQSYTV 70 (167)
Q Consensus 10 ~~~~~~~~~~~~v~~G~~~~l~C~a~~~~~~~~~~i~W~k~~~~~~~~~~----------~~-~v--------~~g~y~c 70 (167)
.+.|...+.+..+.+|+++.|.|.+.+.+. +.+.|+|++. .+.... .. .+ ..|.|+|
T Consensus 5 ~P~~~~~~~~~~v~~G~~v~l~C~~~~~p~---~~v~W~~~~~-~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C 80 (194)
T 2a38_A 5 APTFTQPLQSVVVLEGSTATFEAHISGFPV---PEVSWFRDGQ-VISTSTLPGVQISFSDGRAKLTIPAVTKANSGRYSL 80 (194)
T ss_dssp EEEEEECCCCEEEETTSCEEEEEEEEEESC---CEEEEEESSS-BCCTTTSTTCEEEEETTEEEEEESSCCGGGCEEEEE
T ss_pred CCeEEccCCceEEECCCEEEEEEEEEecCC---CEEEEEECCE-EcccccCCceEEEeCCCEEEEEECCCCcccCEEEEE
Confidence 456888889999999999999999987765 3799999854 332211 00 11 2799999
Q ss_pred EecC----------------------------eEEEeCCcEEEEeeeCCccCCcceeEEEEeCCCeeeEEeeeecCCceE
Q psy12724 71 NIMD----------------------------EHVLKGNSAVLKCHIPSFVADYVAVESWISDQGEELFVDMTESTDGKY 122 (167)
Q Consensus 71 ~~~~----------------------------~~v~~G~~a~l~C~~~~~~~~p~p~i~W~k~~~~~l~~~~~~~~~~r~ 122 (167)
.+.+ ..+.+|+++.|.|.+.+ .|.|.++|+|++ ..+. ...++
T Consensus 81 ~~~n~~~~~~~~~~l~v~~~~~~p~~~~~~~~~~~~~g~~~~l~C~~~g---~p~~~v~W~~~~-~~~~------~~~~~ 150 (194)
T 2a38_A 81 KATNGSGQATSTAELLVKAETAPPNFVQRLQSMTVRQGSQVRLQVRVTG---IPTPVVKFYRDG-AEIQ------SSLDF 150 (194)
T ss_dssp EEEETTEEEEEEEEEEEECCCEEEEEEECCCCEEECTTEEEEEEEEEEE---ESCCEEEEEETT-EECC------CSSSE
T ss_pred EEEcCCceEeEEEEEEEccCCCCCEEEeCCccEEEcCCCEEEEEEEEEE---ecCCeEEEEECC-EECC------CCCcE
Confidence 8632 23457999999999974 488899999997 4553 34566
Q ss_pred EEccCC---eEEEeecCcCCCCcceEEEeeecC
Q psy12724 123 LVLPSG---ELHIRDVGPEDGYKSYQCRTKHRL 152 (167)
Q Consensus 123 ~~~~~g---~L~I~~v~~~D~~G~Y~C~a~n~~ 152 (167)
.+..+| .|.|.+++.+|+ |.|+|.|.|..
T Consensus 151 ~~~~~~~~~~L~i~~~~~~d~-G~Y~C~a~n~~ 182 (194)
T 2a38_A 151 QISQEGDLYSLLIAEAYPEDS-GTYSVNATNSV 182 (194)
T ss_dssp EEEEETTEEEEEEEEECGGGC-EEEEEEEEETT
T ss_pred EEEEcCCEEEEEECCCChhcC-eEEEEEEEeCC
Confidence 666555 699999999998 99999999987
No 8
>2j8h_A Titin, connectin; cardiomyopathy, nuclear protein, serine/threonine-protein KI LIMB-girdle muscular dystrophy, phosphorylation; 1.99A {Homo sapiens} PDB: 2j8o_A 2ill_A
Probab=99.82 E-value=1.4e-19 Score=134.05 Aligned_cols=128 Identities=19% Similarity=0.321 Sum_probs=97.0
Q ss_pred eeceeeEEeEEEEEeCCcEEEEeecCCCCCCcceeeEEeeCCCceeeecCCc-----------eE--------EEeeeEE
Q psy12724 10 SQYYEAQVYDVFVIKGNAAVFKCNLPSFVSDHLDVVSWADTDGGQYQIDNQD-----------FV--------VSQSYTV 70 (167)
Q Consensus 10 ~~~~~~~~~~~~v~~G~~~~l~C~a~~~~~~~~~~i~W~k~~~~~~~~~~~~-----------~v--------~~g~y~c 70 (167)
.+.|...+.+..+.+|+++.|.|.+.+.|. +.+.|+|++. .+..+..+ .+ ..|.|+|
T Consensus 4 ~P~~~~~~~~~~v~~G~~v~l~C~~~~~p~---~~v~W~~~~~-~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C 79 (197)
T 2j8h_A 4 APHFKEELRNLNVRYQSNATLVCKVTGHPK---PIVKWYRQGK-EIIADGLKYRIQEFKGGYHQLIIASVTDDDATVYQV 79 (197)
T ss_dssp CCEEEECCCCEEEETTSCEEEEEEEECSSC---CEEEEEETTE-ECCCCSSSEEEEEETTTEEEEEECSCCGGGCSEEEE
T ss_pred CCEEEEcCCccEEcCCCEEEEEEEEeecCC---CEEEEEECCE-ECccCCCcEEEEEcCCCEEEEEECcCCHHhCEEEEE
Confidence 356788889999999999999999988765 4799999854 33222111 11 2799999
Q ss_pred EecC------------------------------eEEEeCCcEEEEeeeCCccCCcceeEEEEeCCCeeeEEeeeecCCc
Q psy12724 71 NIMD------------------------------EHVLKGNSAVLKCHIPSFVADYVAVESWISDQGEELFVDMTESTDG 120 (167)
Q Consensus 71 ~~~~------------------------------~~v~~G~~a~l~C~~~~~~~~p~p~i~W~k~~~~~l~~~~~~~~~~ 120 (167)
.+.+ ..+.+|+++.|.|.+.+ .|.|.++|+|++ ..+. ...
T Consensus 80 ~~~n~~g~~~~~~~l~V~~~p~~~~~~~~~~~~~~~~~~g~~~~l~C~~~g---~p~p~i~W~~~~-~~~~------~~~ 149 (197)
T 2j8h_A 80 RATNQGGSVSGTASLEVEVPAKIHLPKTLEGMGAVHALRGEVVSIKIPFSG---KPDPVITWQKGQ-DLID------NNG 149 (197)
T ss_dssp EEEETTEEEEEEEEEEEEEEEEECCSSCBTTBEEEEEETTCCCEEEEEEEE---ESCCEEEEEESS-CEEC------SSS
T ss_pred EEEECCCceeEEEEEEEcCCCcCCCCccccccCeEEEeCCCEEEEEEEEEe---cCCCcEEEEECC-EEee------cCC
Confidence 8632 23456999999999974 588999999997 4553 345
Q ss_pred eEEEcc---CCeEEEee-cCcCCCCcceEEEeeecC
Q psy12724 121 KYLVLP---SGELHIRD-VGPEDGYKSYQCRTKHRL 152 (167)
Q Consensus 121 r~~~~~---~g~L~I~~-v~~~D~~G~Y~C~a~n~~ 152 (167)
++.+.. ++.|.|.+ ++.+|+ |.|+|.|.|..
T Consensus 150 ~~~~~~~~~~~~L~i~~~~~~~d~-G~Y~C~a~N~~ 184 (197)
T 2j8h_A 150 HYQVIVTRSFTSLVFPNGVERKDA-GFYVVCAKNRF 184 (197)
T ss_dssp SCEEEECSSEEEEECTTCCCGGGC-EEEEEEEEETT
T ss_pred CEEEEEcCCceEEEEeCCCCcccC-EeEEEEEEeCC
Confidence 555543 35899999 999998 99999999987
No 9
>3kld_A Contactin 4, axcam, BIG-2; cell adhesion, protein complex, receptor protein tyrosine phosphatase; HET: NAG; 2.00A {Mus musculus} PDB: 3jxa_A*
Probab=99.82 E-value=9.3e-20 Score=149.26 Aligned_cols=129 Identities=20% Similarity=0.315 Sum_probs=98.3
Q ss_pred EeEEEEEeCCcEEEEeecCCCCCCcceeeEEeeCCCceeeecC-----CceE--------EEeeeEEEecC---------
Q psy12724 17 VYDVFVIKGNAAVFKCNLPSFVSDHLDVVSWADTDGGQYQIDN-----QDFV--------VSQSYTVNIMD--------- 74 (167)
Q Consensus 17 ~~~~~v~~G~~~~l~C~a~~~~~~~~~~i~W~k~~~~~~~~~~-----~~~v--------~~g~y~c~~~~--------- 74 (167)
+++..+.+|+++.|.|.+.+.|. |.+.|+|+++..+.... ...+ .+|.|+|.+.|
T Consensus 212 ~~~~~~~~G~~v~l~C~~~g~P~---p~i~W~k~~~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~N~~G~~~~~~ 288 (384)
T 3kld_A 212 PETVPAEKGTTVKLECFALGNPV---PTILWRRADGKPIARKARRHKSNGILEIPNFQQEDAGSYECVAENSRGKNVAKG 288 (384)
T ss_dssp CSEEEEETTSCEEEEEEEEEESC---CEEEEEETTCCCCCTTCEECTTSCEEEECSCCGGGCEEEEEEEEETTEEEEEEE
T ss_pred CCceEecCCCcEEEEEEEeecCC---CcEEEEeCCCccccccceecCCCcEEEECCCChhhCEEEEEEEEcCCCeEEEEE
Confidence 45677899999999999998875 47999998775543211 1111 27999998743
Q ss_pred ----------------eEEEeCCcEEEEeeeCCccCCcceeEEEEeCCCeeeEEeeeecCCceEEEccCCeEEEeecCcC
Q psy12724 75 ----------------EHVLKGNSAVLKCHIPSFVADYVAVESWISDQGEELFVDMTESTDGKYLVLPSGELHIRDVGPE 138 (167)
Q Consensus 75 ----------------~~v~~G~~a~l~C~~~~~~~~p~p~i~W~k~~~~~l~~~~~~~~~~r~~~~~~g~L~I~~v~~~ 138 (167)
..+.+|+++.|.|.+. |.|.|.++|+||+ ..+. .+.|+.+ .+|.|.|.+++.+
T Consensus 289 ~l~v~~~P~~~~~~~~~~v~~g~~v~l~C~~~---g~P~p~i~W~k~g-~~l~------~~~~~~~-~~~~L~i~~v~~~ 357 (384)
T 3kld_A 289 QLTFYAQPNWVQIINDIHVAMEESVFWECKAN---GRPKPTYRWLKNG-DPLL------TRDRIQI-EQGTLNITIVNLS 357 (384)
T ss_dssp EEEEEEEEEEEECCCCEEECTTCCEEEECEEE---EESCCEEEEEETT-EECC------CBTTEEE-ETTEEEESSCCGG
T ss_pred EEEEecCCccccCCCceEecCCCCEEEEeECC---ccCCCeEEEEECC-EECC------CCccEEE-eCCEEEEeecChh
Confidence 3456799999999998 4599999999998 5553 2456654 5789999999999
Q ss_pred CCCcceEEEeeecC---cceEEEee
Q psy12724 139 DGYKSYQCRTKHRL---TGETRLSA 160 (167)
Q Consensus 139 D~~G~Y~C~a~n~~---~~~~~l~~ 160 (167)
|+ |.|+|.|.|.. ...+.|.+
T Consensus 358 D~-G~Y~C~A~N~~G~~~~~a~L~V 381 (384)
T 3kld_A 358 DA-GMYQCVAENKHGVIFSSAELSV 381 (384)
T ss_dssp GC-EEEEEEEEETTEEEEEEEEEEE
T ss_pred hC-EEEEEEEEeCCceEEeceEEEE
Confidence 99 99999999987 34455554
No 10
>1qz1_A Neural cell adhesion molecule 1, 140 kDa isoform; IG modules, NCAM; 2.00A {Rattus norvegicus} SCOP: b.1.1.4 b.1.1.4 b.1.1.4 PDB: 1ie5_A
Probab=99.82 E-value=2.5e-19 Score=139.87 Aligned_cols=130 Identities=18% Similarity=0.374 Sum_probs=102.0
Q ss_pred ceeeEEeEEEEEeCCcEEEEeecCCCCCCcceeeEEeeCCCceeeecCCc-----------eE--------EEeeeEEEe
Q psy12724 12 YYEAQVYDVFVIKGNAAVFKCNLPSFVSDHLDVVSWADTDGGQYQIDNQD-----------FV--------VSQSYTVNI 72 (167)
Q Consensus 12 ~~~~~~~~~~v~~G~~~~l~C~a~~~~~~~~~~i~W~k~~~~~~~~~~~~-----------~v--------~~g~y~c~~ 72 (167)
.+.+.|++..|.+|+++.|.|.+.+.+.. +.+.|+|.++..+..+..+ .+ ..|.|+|.+
T Consensus 4 ~v~~~p~~~~v~~G~~v~l~C~~~~~~~~--~~i~W~~~~g~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~D~G~Y~C~~ 81 (291)
T 1qz1_A 4 QVDIVPSQGEISVGESKFFLCQVAGDAKD--KDISWFSPNGEKLSPNQQRISVVWNDDDSSTLTIYNANIDDAGIYKCVV 81 (291)
T ss_dssp CEEEESSSEEEETTCCEEEEEEESSCCSC--CEEEEECTTSCBCCSSCSSEEEEEEETTEEEEEECSCCGGGCEEEEEEE
T ss_pred ceEecCCCceEeCCCeEEEEEEeCCCCCC--cEeEEECCCCeECccCCceEEEEEcCCCeEEEEEecCCCCCCEEEEEEE
Confidence 47788999999999999999999987642 5799999666655432221 11 179999986
Q ss_pred cC--------------------------eEEEeCCcEEEEeeeCCccCCcceeEEEEeCCCeeeEEeeeecCCceEEEcc
Q psy12724 73 MD--------------------------EHVLKGNSAVLKCHIPSFVADYVAVESWISDQGEELFVDMTESTDGKYLVLP 126 (167)
Q Consensus 73 ~~--------------------------~~v~~G~~a~l~C~~~~~~~~p~p~i~W~k~~~~~l~~~~~~~~~~r~~~~~ 126 (167)
.+ ..+.+|+++.|.|.+.+ .|.|.++|+|++. .+.. ..+.++....
T Consensus 82 ~n~~g~~~~~~~~l~v~~~~~~~~~~~~~~~~~g~~v~l~C~~~~---~p~~~v~W~~~~~-~~~~----~~~~~~~~~~ 153 (291)
T 1qz1_A 82 TAEDGTQSEATVNVKIFQKLMFKNAPTPQEFKEGEDAVIVCDVVS---SLPPTIIWKHKGR-DVIL----KKDVRFIVLS 153 (291)
T ss_dssp ECTTSCEEEEEEEEEEECCSEEEECCSSEEEETTSCEEECCEEEC---SSCCEEEEEETTS-CSST----TCCTTEEECT
T ss_pred EcCCCCeeEEEEEEEeeccccccCCCCcccccCCCeEEEEEEecc---CCCCEEEEEECCE-Eccc----CCCceEEEcc
Confidence 32 34578999999999974 5888999999984 4422 2356788888
Q ss_pred CCeEEEeecCcCCCCcceEEEeeecC
Q psy12724 127 SGELHIRDVGPEDGYKSYQCRTKHRL 152 (167)
Q Consensus 127 ~g~L~I~~v~~~D~~G~Y~C~a~n~~ 152 (167)
++.|.|.+++.+|+ |.|+|.|.|..
T Consensus 154 ~~~L~i~~~~~~d~-G~Y~C~a~n~~ 178 (291)
T 1qz1_A 154 NNYLQIRGIKKTDE-GTYRCEGRILA 178 (291)
T ss_dssp TSCEEETTCCGGGC-EEEEEEEEEGG
T ss_pred CCcEEEccCccccC-eEEEEEEEecC
Confidence 89999999999999 99999999976
No 11
>2v5t_A NCAM2, N-CAM 2, neural cell adhesion molecule 2; phosphorylation, immunoglobulin domain, membrane, glycoprote adhesion, transmembrane; HET: NAG; 2.00A {Homo sapiens}
Probab=99.81 E-value=1.6e-19 Score=132.46 Aligned_cols=128 Identities=19% Similarity=0.315 Sum_probs=93.3
Q ss_pred eceeeEEeEEEEEeCCcEEEEeecCCCCCCcceeeEEeeCCCceeeecCCc-------eE--------EEeeeEEEecC-
Q psy12724 11 QYYEAQVYDVFVIKGNAAVFKCNLPSFVSDHLDVVSWADTDGGQYQIDNQD-------FV--------VSQSYTVNIMD- 74 (167)
Q Consensus 11 ~~~~~~~~~~~v~~G~~~~l~C~a~~~~~~~~~~i~W~k~~~~~~~~~~~~-------~v--------~~g~y~c~~~~- 74 (167)
+.|...+.+..+.+|+++.|.|.+.+.+. +.+.|++++.........+ .+ ..|.|+|.+.+
T Consensus 3 ~~~~~~~~~~~v~~G~~v~l~C~~~~~p~---~~v~W~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~~~~~ 79 (189)
T 2v5t_A 3 LTFREVVSPQEFKQGEDAEVVCRVSSSPA---PAVSWLYHNEEVTTISDNRFAMLANNNLQILNINKSDEGIYRCEGRVE 79 (189)
T ss_dssp CEEEECCSSEEEETTSCEEECCEEECSSC---CEEEEEC-----CBCCCTTEEECTTSCEEETTCCGGGCEEEEEEEEET
T ss_pred ceeeccCCCEEEeCCCcEEEEEEEcCCCC---CEEEEEECCccceeccCCeEEEecCCCEEEeeCCHhHCcEEEEEEEEc
Confidence 35778888999999999999999988764 4799999865332211111 11 27999998632
Q ss_pred ----------------------------eEEEeCCcEEEEeeeCCccCCcceeEEEEeCCCeeeEEeeeecCCceEEEcc
Q psy12724 75 ----------------------------EHVLKGNSAVLKCHIPSFVADYVAVESWISDQGEELFVDMTESTDGKYLVLP 126 (167)
Q Consensus 75 ----------------------------~~v~~G~~a~l~C~~~~~~~~p~p~i~W~k~~~~~l~~~~~~~~~~r~~~~~ 126 (167)
..+.+|+++.|.|.+.+ .|.|.++|+|++ ..+. ...++.+..
T Consensus 80 ~~~~~~~~~~~l~v~~~p~~~~~~~~~~~~~~~g~~v~l~C~~~g---~p~~~v~W~~~g-~~~~------~~~~~~~~~ 149 (189)
T 2v5t_A 80 ARGEIDFRDIIVIVNVPPAISMPQKSFNATAERGEEMTFSCRASG---SPEPAISWFRNG-KLIE------ENEKYILKG 149 (189)
T ss_dssp TTTEEEEEEEEEEEEEEEEEECSCCEEEEETTSCCCEEEECEEEE---ESCCEEEEEETT-EECC------CSSSEEEET
T ss_pred CCCceEEEEEEEEecCCCCcccccccccccccCCCcEEEEEEEcc---CCCCeEEEEECC-EECc------CCCcEEEec
Confidence 12235999999999974 488899999997 4553 244555544
Q ss_pred -CCeEEEeecCcCCCCcceEEEeeecC
Q psy12724 127 -SGELHIRDVGPEDGYKSYQCRTKHRL 152 (167)
Q Consensus 127 -~g~L~I~~v~~~D~~G~Y~C~a~n~~ 152 (167)
++.|.|.+++.+|+ |.|+|.|.|..
T Consensus 150 ~~~~L~i~~~~~~d~-G~Y~C~a~n~~ 175 (189)
T 2v5t_A 150 SNTELTVRNIINSDG-GPYVCRATNKA 175 (189)
T ss_dssp TTTEEEECSCCGGGC-EEEEEEEEETT
T ss_pred CCCEEEEcCCChhhC-eeEEEEEEeCC
Confidence 56899999999998 99999999987
No 12
>1fnl_A Low affinity immunoglobulin gamma FC region receptor III-B; beta sandwich, immunoglobulin-like, immune system receptor; 1.80A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 PDB: 1e4j_A 1e4k_C* 1t83_C* 1t89_C* 3ay4_C*
Probab=99.81 E-value=1.5e-18 Score=127.41 Aligned_cols=133 Identities=14% Similarity=0.185 Sum_probs=96.1
Q ss_pred eceeeEEeEEEEEeCCcEEEEeecCCCCCCcceeeEEeeCCCceeeecCCc-eE------EEeeeEEEecC---------
Q psy12724 11 QYYEAQVYDVFVIKGNAAVFKCNLPSFVSDHLDVVSWADTDGGQYQIDNQD-FV------VSQSYTVNIMD--------- 74 (167)
Q Consensus 11 ~~~~~~~~~~~v~~G~~~~l~C~a~~~~~~~~~~i~W~k~~~~~~~~~~~~-~v------~~g~y~c~~~~--------- 74 (167)
+.+...+....+.+|+++.|.|.+.+.+.+ ..+.|+|++. .+..+... .+ ..|.|+|.+.+
T Consensus 8 p~i~~~p~~~~v~~G~~v~L~C~~~~~p~~--~~~~W~~~~~-~~~~~~~~L~i~~~~~~d~G~Y~C~~~n~~~s~~~~l 84 (175)
T 1fnl_A 8 AVVFLEPQWYSVLEKDSVTLKCQGAYSPED--NSTQWFHNES-LISSQASSYFIDAATVNDSGEYRCQTNLSTLSDPVQL 84 (175)
T ss_dssp CEEEEESCCSEEETTCCEEEEEECCCBTTB--CCCEEEETTE-EEESSCSEEEESSCCGGGCEEEEEECSSSCCCCCEEE
T ss_pred CEEEEcCCceeeeCCCcEEEEeeCCCCCCC--cceEEEECCE-EccCCceEEEEeCCCcccCEEEEEEeeCCcccccEEE
Confidence 446677887899999999999999988754 2479999853 33322111 11 27999998643
Q ss_pred -------------eEEEeCCcEEEEeeeCCccCCcceeEEEEeCCCeeeEEeeeecCCceEEEccCCeEEEeecCcCCCC
Q psy12724 75 -------------EHVLKGNSAVLKCHIPSFVADYVAVESWISDQGEELFVDMTESTDGKYLVLPSGELHIRDVGPEDGY 141 (167)
Q Consensus 75 -------------~~v~~G~~a~l~C~~~~~~~~p~p~i~W~k~~~~~l~~~~~~~~~~r~~~~~~g~L~I~~v~~~D~~ 141 (167)
..+.+|+++.|.|.+.+. .|.+.++|+|++ ..+.. ...++.|.|.+++.+|+
T Consensus 85 ~V~~~~~~~~~~~~~~~~g~~~~l~C~~~~~--~~~~~~~W~k~g-~~~~~-----------~~~~~~L~i~~v~~~d~- 149 (175)
T 1fnl_A 85 EVHIGWLLLQAPRWVFKEEDPIHLRCHSWKN--TALHKVTYLQNG-KDRKY-----------FHHNSDFHIPKATLKDS- 149 (175)
T ss_dssp EEECSSEEEECSCSEEETTCCEEEEEEECTT--CCCEEEEEEETT-EEEEE-----------EEECCCEEESSCCGGGC-
T ss_pred EEeCCCceeeCCCceecCCCCEEEEEEcCCC--CCceEEEEEECC-eEccC-----------CCCCCEEEEcccChhhC-
Confidence 245689999999999742 244699999997 45421 12357899999999999
Q ss_pred cceEEEeeecC----cceEEEeee
Q psy12724 142 KSYQCRTKHRL----TGETRLSAT 161 (167)
Q Consensus 142 G~Y~C~a~n~~----~~~~~l~~~ 161 (167)
|.|+|.|.|.. +..+.|.+.
T Consensus 150 G~Y~C~a~n~~~~~~s~~~~l~V~ 173 (175)
T 1fnl_A 150 GSYFCRGLVGSKNVSSETVNITIT 173 (175)
T ss_dssp EEEEEEEEETTEEEECCCEEEEEE
T ss_pred eEEEEEEEcCCCCccCccEEEEEe
Confidence 99999999964 344455543
No 13
>2yd1_A Tyrosine-protein phosphatase LAR; hydrolase; 1.80A {Drosophila melanogaster} PDB: 3pxj_A
Probab=99.81 E-value=5.6e-19 Score=132.90 Aligned_cols=138 Identities=17% Similarity=0.268 Sum_probs=101.9
Q ss_pred eeceeeEEeEEEEEeCCcEEEEeecCCCCCCcceeeEEeeCCCceeeecCCc-----------e---------EEEeeeE
Q psy12724 10 SQYYEAQVYDVFVIKGNAAVFKCNLPSFVSDHLDVVSWADTDGGQYQIDNQD-----------F---------VVSQSYT 69 (167)
Q Consensus 10 ~~~~~~~~~~~~v~~G~~~~l~C~a~~~~~~~~~~i~W~k~~~~~~~~~~~~-----------~---------v~~g~y~ 69 (167)
.+.|...+.+..+.+|+++.|.|.+.+.+.+ .+.|+|++. .+.....+ . -..|.|+
T Consensus 6 pP~~~~~p~~~~v~~G~~v~l~C~~~g~p~~---~v~W~~~~~-~~~~~~~~~~~~~~~~~~~~L~i~~v~~~~d~G~Y~ 81 (212)
T 2yd1_A 6 PPEIIRKPQNQGVRVGGVASFYCAARGDPPP---SIVWRKNGK-KVSGTQSRYTVLEQPGGISILRIEPVRAGRDDAPYE 81 (212)
T ss_dssp CCEEEECCCCEEEETTSCEEEEEEEECSSCC---EEEEEETTE-ECCTTSTTEEEEEETTTEEEEEESSCCTTTTCSEEE
T ss_pred CCEEEcCCCceEEecCCEEEEEEEEccCCCC---eEEEEECCE-ECCCCcceeEEEEcCCCeEEEEEEecCCCCcCceEE
Confidence 4568888999999999999999999887754 799999853 33211100 0 1258899
Q ss_pred EEecC---------------------------------eEEEeCCcEEEEeeeCCccCCcceeEEEEeCCCeeeEEeeee
Q psy12724 70 VNIMD---------------------------------EHVLKGNSAVLKCHIPSFVADYVAVESWISDQGEELFVDMTE 116 (167)
Q Consensus 70 c~~~~---------------------------------~~v~~G~~a~l~C~~~~~~~~p~p~i~W~k~~~~~l~~~~~~ 116 (167)
|.+.+ ..+.+|+++.|.|.+. +.|.|.++|+|++ ..+..
T Consensus 82 C~~~n~~g~~~~~~~~l~V~~~~~~~~~~p~~~~~~~~~~~~~g~~v~l~C~~~---g~p~p~i~W~~~~-~~~~~---- 153 (212)
T 2yd1_A 82 CVAENGVGDAVSADATLTIYEGDKTPAGFPVITQGPGTRVIEVGHTVLMTCKAI---GNPTPNIYWIKNQ-TKVDM---- 153 (212)
T ss_dssp EEEECSSSCEEEEEEEEEEECTTCSCTTCCEEEECCCCEEEETTCCEEECCEEE---CSSCCEEEEEETT-EECCT----
T ss_pred EEEEeCCCCeEEeeEEEEEecccCCCCCCCeeEeCCCceEeecCCeEEEEEEec---cCCCCeEEEEECC-eEccc----
Confidence 98632 2335699999999997 4588999999997 45531
Q ss_pred cCCceEEEccCCeEEEeecCcCCCCcceEEEeeecCc----ceEEEeeeC
Q psy12724 117 STDGKYLVLPSGELHIRDVGPEDGYKSYQCRTKHRLT----GETRLSATK 162 (167)
Q Consensus 117 ~~~~r~~~~~~g~L~I~~v~~~D~~G~Y~C~a~n~~~----~~~~l~~~~ 162 (167)
...++. ..+|.|.|.+++.+|+ |.|+|.|.|... ..+.|.+..
T Consensus 154 -~~~~~~-~~~~~L~i~~v~~~d~-G~Y~C~a~N~~G~~~s~~~~l~V~~ 200 (212)
T 2yd1_A 154 -SNPRYS-LKDGFLQIENSREEDQ-GKYECVAENSMGTEHSKATNLYVKV 200 (212)
T ss_dssp -TSTTEE-EETTEEEECSCCGGGC-EEEEEEEEETTEEEECCCEEEEEEC
T ss_pred -CCCeEE-ccCCeEEEccCChhhC-EEEEEEeecCCCceeEEEEEEEEEe
Confidence 245554 4578999999999998 999999999872 225666644
No 14
>3sgj_C Human FCG3A receptor; receptor complex, FC receptor, antibody, immune system; HET: NAG BMA MAN FUC; 2.20A {Homo sapiens} PDB: 3sgk_C*
Probab=99.80 E-value=1.5e-18 Score=131.32 Aligned_cols=132 Identities=12% Similarity=0.148 Sum_probs=96.6
Q ss_pred eceeeEEeEEEEEeCCcEEEEeecCCCCCCcceeeEEeeCCCceeeecCCceE-------EEeeeEEEecC---------
Q psy12724 11 QYYEAQVYDVFVIKGNAAVFKCNLPSFVSDHLDVVSWADTDGGQYQIDNQDFV-------VSQSYTVNIMD--------- 74 (167)
Q Consensus 11 ~~~~~~~~~~~v~~G~~~~l~C~a~~~~~~~~~~i~W~k~~~~~~~~~~~~~v-------~~g~y~c~~~~--------- 74 (167)
+.+...|.+..+.+|+++.|.|.+.+.+.+ ..+.|+|++. .+..+..... .+|.|+|.+.+
T Consensus 8 p~i~~~p~~~~v~~G~~v~L~C~~~~~p~~--~~v~W~k~g~-~l~~~~~~L~i~~v~~~D~G~Y~C~a~n~~~s~~~~l 84 (204)
T 3sgj_C 8 AVVFLEPQWYRVLEKDSVTLKCQGAYSPED--QSTQWFHNES-LISSQASSYFIDAATVDDSGEYRCQTQLSTLSDPVQL 84 (204)
T ss_dssp CEEEEESCCSEEETTCCEEEEEECCSSSSC--CCEEEEETTE-EESCCSSEEEESSCCGGGCEEEEEEETTSBCCCCEEE
T ss_pred CeEEEcCCCeEEECCCCEEEEEcCCCCCCC--cEEEEEECCE-EcccCccEEEEecccccCCEEEEEEeCCCcccccEEE
Confidence 346677777899999999999999987754 2499999854 4433221111 27999998743
Q ss_pred -------------eEEEeCCcEEEEeeeCCccCCcceeEEEEeCCCeeeEEeeeecCCceEEEccCCeEEEeecCcCCCC
Q psy12724 75 -------------EHVLKGNSAVLKCHIPSFVADYVAVESWISDQGEELFVDMTESTDGKYLVLPSGELHIRDVGPEDGY 141 (167)
Q Consensus 75 -------------~~v~~G~~a~l~C~~~~~~~~p~p~i~W~k~~~~~l~~~~~~~~~~r~~~~~~g~L~I~~v~~~D~~ 141 (167)
..+.+|+++.|.|.+.+ +.|.+.++|+||+ ..+.. ...++.|.|.+++.+|+
T Consensus 85 ~V~~~p~~~~~~~~~v~~G~~v~L~C~~~~--~~p~~~v~W~k~g-~~~~~-----------~~~~~~L~i~~v~~~D~- 149 (204)
T 3sgj_C 85 EVHIGWLLLQAPRWVFKEEDPIHLRCHSWK--NTALHKVTYLQNG-KGRKY-----------FHHNSDFYIPKATLKDS- 149 (204)
T ss_dssp EEECSSEEEECSCSEEETTCCEEEEEEEGG--GCCCEEEEEEETT-EEEEE-----------EEECCCEEESSCCGGGC-
T ss_pred EEecCceEecCCceeEeCCCcEEEEEEecC--CCCCceEEEEECC-cEeec-----------ccCCceEEECcCCcccC-
Confidence 24568999999999964 2367889999997 44421 11367899999999999
Q ss_pred cceEEEeeecC----cceEEEee
Q psy12724 142 KSYQCRTKHRL----TGETRLSA 160 (167)
Q Consensus 142 G~Y~C~a~n~~----~~~~~l~~ 160 (167)
|.|+|.|.|.. +..+.|.+
T Consensus 150 G~Y~C~a~n~~~~~~s~~~~l~V 172 (204)
T 3sgj_C 150 GSYFCRGLVGSKNVSSETVQITI 172 (204)
T ss_dssp EEEEEEEEETTEEEECCCEEEEE
T ss_pred EEEEEEEEeCCCceecCcEEEEE
Confidence 99999999943 44555555
No 15
>2vr9_A Roundabout 1, ROBO; immunoglobulin-like domain, AXON guidance, cell adhesion, immunoglobulin domain; 3.2A {Drosophila melanogaster} PDB: 2vra_A*
Probab=99.80 E-value=5.8e-19 Score=132.69 Aligned_cols=134 Identities=20% Similarity=0.294 Sum_probs=99.7
Q ss_pred eeceeeEEeEEEEEeCCcEEEEeecCCCCCCcceeeEEeeCCCceeeec-----------CCce----------EEEeee
Q psy12724 10 SQYYEAQVYDVFVIKGNAAVFKCNLPSFVSDHLDVVSWADTDGGQYQID-----------NQDF----------VVSQSY 68 (167)
Q Consensus 10 ~~~~~~~~~~~~v~~G~~~~l~C~a~~~~~~~~~~i~W~k~~~~~~~~~-----------~~~~----------v~~g~y 68 (167)
.+.|...+.+..+.+|+++.|.|.+.+.+. +.+.|+|++. .+..+ +... -..|.|
T Consensus 9 ~P~i~~~p~~~~v~~G~~v~L~C~~~g~p~---~~v~W~~~g~-~~~~~~~~~~~~~~~~~~~~~~l~i~~v~~~d~G~Y 84 (217)
T 2vr9_A 9 SPRIIEHPTDLVVKKNEPATLNCKVEGKPE---PTIEWFKDGE-PVSTNEKKSHRVQFKDGALFFYRTMQGKKEQDGGEY 84 (217)
T ss_dssp CCEEEECCCCEEECTTSCEEECCEEECSSC---CEEEEEETTE-ECCCSSSSSSEEECTTSCEEESSCCBSSSCBCCEEE
T ss_pred CCEEecCCCceEEeCCCcEEEEEEcCCCCC---CeEEEEECCc-CccCCCccceeEEecCCceEEEEEeccCCcccCceE
Confidence 345778889999999999999999988765 4799999753 33221 0000 137999
Q ss_pred EEEecC---------------------------eEEEeCCcEEEEeee-CCccCCcceeEEEEeCCCeeeEEee--eecC
Q psy12724 69 TVNIMD---------------------------EHVLKGNSAVLKCHI-PSFVADYVAVESWISDQGEELFVDM--TEST 118 (167)
Q Consensus 69 ~c~~~~---------------------------~~v~~G~~a~l~C~~-~~~~~~p~p~i~W~k~~~~~l~~~~--~~~~ 118 (167)
+|.+.+ ..+.+|+++.|.|.+ . +.|.|.++|+|++ ..+.... ....
T Consensus 85 ~C~~~n~~g~~~~~~~~l~v~~~~~~~~~~~~~~~~~~g~~v~l~C~~~~---g~p~~~v~W~~~g-~~~~~~~~~~~~~ 160 (217)
T 2vr9_A 85 WCVAKNRVGQAVSRHASLQIAVLRDDFRVEPKDTRVAKGETALLECGPPK---GIPEPTLIWIKDG-VPLDDLKAMSFGA 160 (217)
T ss_dssp EEEEEETTEEEECCCEEEEECEECCSCSBCCCCEEECTTSCEEECCBCCC---EESCCEEEEEETT-EEECCCCCC---C
T ss_pred EEEEecCCCccccccceEEEEEeCCCcEECCCccEEcCCCeEEEEEECCC---CCCCCeEEEEECC-cCCCccccccccc
Confidence 998632 235689999999998 5 4588999999997 5553110 0012
Q ss_pred CceEEEccCCeEEEeecCcCCCCcceEEEeeecC
Q psy12724 119 DGKYLVLPSGELHIRDVGPEDGYKSYQCRTKHRL 152 (167)
Q Consensus 119 ~~r~~~~~~g~L~I~~v~~~D~~G~Y~C~a~n~~ 152 (167)
..++.+..++.|.|.+++.+|+ |.|+|.|.|..
T Consensus 161 ~~~~~~~~~~~L~i~~~~~~d~-G~Y~C~a~N~~ 193 (217)
T 2vr9_A 161 SSRVRIVDGGNLLISNVEPIDE-GNYKCIAQNLV 193 (217)
T ss_dssp CCSEEEETTTEEEESSCCSTTC-EEEEEEEEETT
T ss_pred CCcEEecCCCcEEEeeCCHHHC-eEEEEEEEccc
Confidence 4567777888999999999998 99999999987
No 16
>3s97_C Contactin-1; carbonic anhdyrase like immunoglobulin, cell adhesion comple adhesion; HET: NAG; 2.30A {Homo sapiens}
Probab=99.80 E-value=1e-18 Score=129.05 Aligned_cols=129 Identities=18% Similarity=0.273 Sum_probs=94.9
Q ss_pred eeceeeEEeEEEEEeCCcEEEEee-cCCCCCCcceeeEEeeCCCceeee-cCC---------ceE------EEeeeEEEe
Q psy12724 10 SQYYEAQVYDVFVIKGNAAVFKCN-LPSFVSDHLDVVSWADTDGGQYQI-DNQ---------DFV------VSQSYTVNI 72 (167)
Q Consensus 10 ~~~~~~~~~~~~v~~G~~~~l~C~-a~~~~~~~~~~i~W~k~~~~~~~~-~~~---------~~v------~~g~y~c~~ 72 (167)
.++....+.+..+.+|+++.|.|. +.+.+.. +.+.|+|++...... +.. ..+ ..|.|+|.+
T Consensus 8 ~~~~~~~~~~~~v~~G~~v~L~C~~~~~~p~~--~~v~W~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~~ 85 (201)
T 3s97_C 8 DPFPPEERPEVRVKEGKGMVLLCDPPYHFPDD--LSYRWLLNEFPVFITMDKRRFVSQTNGNLYIANVEASDKGNYSCFV 85 (201)
T ss_dssp CCCCSSCCCCEEEETTCCEEECCCCCSEESSC--CEEEEEESSTTCBCCCSSSEEECTTTCCEEESSCCGGGCEEEEEEE
T ss_pred CccCcCCCceEEEECCCCEEEeccccccCCCc--eEEEEEECCceeeeeeCCCeEEEcCCCeEEECcCCcccCeEEEEEE
Confidence 334445668899999999999999 7777651 479999987543211 111 111 279999986
Q ss_pred cC-----------------------------------eEEEeCCcEEEEeeeCCccCCcceeEEEEeCCCeeeEEeeeec
Q psy12724 73 MD-----------------------------------EHVLKGNSAVLKCHIPSFVADYVAVESWISDQGEELFVDMTES 117 (167)
Q Consensus 73 ~~-----------------------------------~~v~~G~~a~l~C~~~~~~~~p~p~i~W~k~~~~~l~~~~~~~ 117 (167)
.+ ..+.+|+++.|.|.+.+ .|.|.++|+|++ ..+.
T Consensus 86 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~g~~~~l~C~~~g---~p~p~v~W~~~~-~~~~------ 155 (201)
T 3s97_C 86 SSPSITKSVFSKFIPLIPIPERTTKPYPADIVVQFKDVYALMGQNVTLECFALG---NPVPDIRWRKVL-EPMP------ 155 (201)
T ss_dssp EEGGGTEEEECCCEEEEEECCSSCCCEEEEEEEECCCEEEETTCCEEEEEEEEE---ESCCEEEEEETT-BCCC------
T ss_pred EecCCCcchhhcccceeeccccccCCCCCceEecCCceEEecCCcEEEEEEccC---CCCCceEEEeCC-CcCC------
Confidence 32 23467999999999974 588999999998 3442
Q ss_pred CCceEEEccCCeEEEeecCcCCCCcceEEEeeecC
Q psy12724 118 TDGKYLVLPSGELHIRDVGPEDGYKSYQCRTKHRL 152 (167)
Q Consensus 118 ~~~r~~~~~~g~L~I~~v~~~D~~G~Y~C~a~n~~ 152 (167)
........++.|.|.+++.+|+ |.|+|.|.|..
T Consensus 156 -~~~~~~~~~~~L~i~~v~~~d~-G~Y~C~a~n~~ 188 (201)
T 3s97_C 156 -STAEISTSGAVLKIFNIQLEDE-GIYECEAENIR 188 (201)
T ss_dssp -TTCEEETTTTEEEECSCCGGGC-EEEEEEEEETT
T ss_pred -CceeecCCCCEEEEccCChhhC-EEEEEEEEecC
Confidence 2233345678999999999998 99999999987
No 17
>3lcy_A Titin; A-BAND, IG tandem domains, ATP-binding, calmodulin-BI cardiomyopathy, disease mutation, disulfide bond, immunoglo domain, isopeptide bond; 2.50A {Homo sapiens}
Probab=99.80 E-value=8.1e-19 Score=129.25 Aligned_cols=128 Identities=14% Similarity=0.167 Sum_probs=96.4
Q ss_pred eeceeeEEeEEEEEeCCcEEEEeecCCCCCCcceeeEEeeCCCceeeec--------CCc-eE--------EEeeeEEEe
Q psy12724 10 SQYYEAQVYDVFVIKGNAAVFKCNLPSFVSDHLDVVSWADTDGGQYQID--------NQD-FV--------VSQSYTVNI 72 (167)
Q Consensus 10 ~~~~~~~~~~~~v~~G~~~~l~C~a~~~~~~~~~~i~W~k~~~~~~~~~--------~~~-~v--------~~g~y~c~~ 72 (167)
.+.|...+.+..+.+|+++.|.|.+.+.+. +.+.|+|++. .+..+ +.. .+ ..|.|+|.+
T Consensus 7 ~P~~~~~~~~~~v~~G~~v~l~C~~~~~p~---~~v~W~~~~~-~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~~ 82 (197)
T 3lcy_A 7 APGIRKEMKDVTTKLGEAAQLSCQIVGRPL---PDIKWYRFGK-ELIQSRKYKMSSDGRTHTLTVMTEEQEDEGVYTCIA 82 (197)
T ss_dssp EEEEEECCCCEEEETTSEEEEEEEEEEESC---CEEEEEETTE-EECCCSSEEEEESSSEEEEEEECCSGGGCEEEEEEE
T ss_pred CCcccccCCceEEeCCCcEEEEEEEecCCC---CEEEEEECCE-ECCCCccEEEEeCCCEEEEEEecCCccCCEEEEEEE
Confidence 455788889999999999999999987664 4799999854 33221 110 11 169999986
Q ss_pred cC----------------------------eEEEeCCcEEEEeeeCCccCCcceeEEEEeCCCeeeEEeeeecCCceEEE
Q psy12724 73 MD----------------------------EHVLKGNSAVLKCHIPSFVADYVAVESWISDQGEELFVDMTESTDGKYLV 124 (167)
Q Consensus 73 ~~----------------------------~~v~~G~~a~l~C~~~~~~~~p~p~i~W~k~~~~~l~~~~~~~~~~r~~~ 124 (167)
.+ ..+.+|+++.|.|.+.+ .|.|.++|+|++ ..+. ...++.+
T Consensus 83 ~n~~~~~~~~~~l~v~~~p~~~~~~~~~~~~~~~~g~~~~l~C~~~~---~p~p~v~W~~~~-~~~~------~~~~~~~ 152 (197)
T 3lcy_A 83 TNEVGEVETSSKLLLQATPQFHPGYPLKEKYYGAVGSTLRLHVMYIG---RPVPAMTWFHGQ-KLLQ------NSENITI 152 (197)
T ss_dssp ECSSCEEEEEEEEEEEEEEEECTTSCCCSEEEEETTSCEEEEEEEEE---ESCCEEEEEETT-EECC------CCSSEEE
T ss_pred ECCCCceeEEEEEEEEcCCCCCCCccCCcceeecCCCeEEEEEEEee---eeCCeeEEeECC-EECC------CCCceEE
Confidence 32 23467999999999974 588999999997 4553 3455555
Q ss_pred ccC---CeEEEeecCc-CCCCcceEEEeeecC
Q psy12724 125 LPS---GELHIRDVGP-EDGYKSYQCRTKHRL 152 (167)
Q Consensus 125 ~~~---g~L~I~~v~~-~D~~G~Y~C~a~n~~ 152 (167)
..+ +.|.|.++.. +|+ |.|+|.|.|..
T Consensus 153 ~~~~~~~~L~i~~~~~~~d~-G~Y~C~a~n~~ 183 (197)
T 3lcy_A 153 ENTEHYTHLVMKNVQRKTHA-GKYKVQLSNVF 183 (197)
T ss_dssp EECSSEEEEEESSCCHHHHC-EEEEEEEECSS
T ss_pred EEcCCEEEEEEccccchhhC-ceEEEEEEcCc
Confidence 544 5799999995 898 99999999987
No 18
>3ry4_A Low affinity immunoglobulin gamma FC region recep; FC receptor, CD32, immunoglobulin superfamily, low responder polymorphism, cell membrane; HET: NAG; 1.50A {Homo sapiens} PDB: 1fcg_A 3ry5_A 1h9v_A 3d5o_F* 3ry6_C* 2fcb_A
Probab=99.79 E-value=2.1e-18 Score=125.23 Aligned_cols=123 Identities=12% Similarity=0.212 Sum_probs=91.8
Q ss_pred ceeeEEeEEEEEeCCcEEEEeecCCCCCCcceeeEEeeCCCceeeecCC-ceE------EEeeeEEEecC----------
Q psy12724 12 YYEAQVYDVFVIKGNAAVFKCNLPSFVSDHLDVVSWADTDGGQYQIDNQ-DFV------VSQSYTVNIMD---------- 74 (167)
Q Consensus 12 ~~~~~~~~~~v~~G~~~~l~C~a~~~~~~~~~~i~W~k~~~~~~~~~~~-~~v------~~g~y~c~~~~---------- 74 (167)
.+...+.+..+.+|+++.|.|.+.+.+.. +.+.|+|++. .+..+.. ..+ ..|.|+|.+.+
T Consensus 6 ~i~~~p~~~~v~~G~~v~l~C~~~~~p~~--~~~~W~~~g~-~~~~~~~~~~~~~~~~~d~G~Y~C~~~~~~~s~~~~l~ 82 (170)
T 3ry4_A 6 VLKLEPPWINVLQEDSVTLTCQGARSPES--DSIQWFHNGN-LIPTHTQPSYRFKANNNDSGEYTCQTGQTSLSDPVHLT 82 (170)
T ss_dssp EEEEESCCSEEETTCEEEEEEESCCCSSS--SCEEEEETTE-ECTTCCSSEEEEECCGGGCEEEEEEETTSBCCCCEEEE
T ss_pred EEEeCCCCeEEECCCcEEEEEEecCCCCc--ceEEEEECCe-EcccCccceEEEecccccCeEEEEEEeCCCceEeEEEE
Confidence 35567777789999999999999988632 4699999853 3332211 111 27999998743
Q ss_pred ------------eEEEeCCcEEEEeeeCCccCCcceeEEEEeCCCeeeEEeeeecCCceEEEccCCeEEEeecCcCCCCc
Q psy12724 75 ------------EHVLKGNSAVLKCHIPSFVADYVAVESWISDQGEELFVDMTESTDGKYLVLPSGELHIRDVGPEDGYK 142 (167)
Q Consensus 75 ------------~~v~~G~~a~l~C~~~~~~~~p~p~i~W~k~~~~~l~~~~~~~~~~r~~~~~~g~L~I~~v~~~D~~G 142 (167)
..+.+|+++.|.|.+.+ +.|.+.++|+|++ ..+.. ...++.|.|.+++.+|+ |
T Consensus 83 v~~~~~~~~~~~~~~~~g~~~~l~C~~~~--~~p~~~~~W~~~g-~~~~~-----------~~~~~~L~i~~v~~~d~-G 147 (170)
T 3ry4_A 83 VLFEWLVLQTPHLEFQEGETIMLRCHSWK--DKPLVKVTFFQNG-KSQKF-----------SHLDPTFSIPQANHSHS-G 147 (170)
T ss_dssp EECCSEEEECSCSEECTTCCEEEEEEEGG--GCCEEEEEEEETT-EEEEE-----------ESSCCEEEESSCCGGGC-E
T ss_pred EECCceEecCCCceeecCCeEEEEEECCC--CCCCceEEEEECC-eEccc-----------cCCCCeEEEEeccccCC-E
Confidence 23458999999999953 3477999999987 44421 12357899999999999 9
Q ss_pred ceEEEeeecC
Q psy12724 143 SYQCRTKHRL 152 (167)
Q Consensus 143 ~Y~C~a~n~~ 152 (167)
.|+|.|.|..
T Consensus 148 ~Y~C~a~n~~ 157 (170)
T 3ry4_A 148 DYHCTGNIGY 157 (170)
T ss_dssp EEEEEEEETT
T ss_pred EEEEEEEeCc
Confidence 9999999987
No 19
>3b5h_A Cervical EMMPRIN, HAB18G/CD147; IG-like domain, cell invasion; 2.80A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4
Probab=99.79 E-value=3e-18 Score=125.84 Aligned_cols=127 Identities=21% Similarity=0.412 Sum_probs=93.9
Q ss_pred EEeEEEEEeCCcEEEEeecCCCCCCcceeeEEeeCCCceeeecCC-----ceE-----EEeeeEEEecC-----------
Q psy12724 16 QVYDVFVIKGNAAVFKCNLPSFVSDHLDVVSWADTDGGQYQIDNQ-----DFV-----VSQSYTVNIMD----------- 74 (167)
Q Consensus 16 ~~~~~~v~~G~~~~l~C~a~~~~~~~~~~i~W~k~~~~~~~~~~~-----~~v-----~~g~y~c~~~~----------- 74 (167)
.+....|.+|+++.|.|.+.+.+.+ ...+.|+|++ ..+..... ... ..|.|+|.+.+
T Consensus 4 ~i~~~~v~~G~~v~l~C~~~~~~~p-~~~~~W~k~~-~~l~~~~~~~~~~~l~i~~~~d~G~Y~C~~~n~~~~~~~l~V~ 81 (184)
T 3b5h_A 4 TVFTTVEDLGSKILLTCSLNDSATE-VTGHRWLKGG-VVLKEDALPGQKTEFKVDSDDQWGEYSCVFLPEPMGTANIQLH 81 (184)
T ss_dssp EEEEEEEEETTEEEEEEEEESCSSC-CCEEEEESSS-EEEECTTCCCSEEEEEECGGGCCEEEEEEEESTTSCEEEEEEC
T ss_pred ceEEEEEecCCCEEEEEECCCCCCC-ceEEEEEeCC-EEeecccccCCcEEEEEechhhCeEEEEEEECCcCcEEEEEEe
Confidence 4556788999999999999887654 3479999975 34433211 011 37999998742
Q ss_pred -----------eEEEeCCcEEEEeeeCCccCCc-ceeEEEEe---CCCeeeEEeeeecCCceEEEccCC---eEEEeecC
Q psy12724 75 -----------EHVLKGNSAVLKCHIPSFVADY-VAVESWIS---DQGEELFVDMTESTDGKYLVLPSG---ELHIRDVG 136 (167)
Q Consensus 75 -----------~~v~~G~~a~l~C~~~~~~~~p-~p~i~W~k---~~~~~l~~~~~~~~~~r~~~~~~g---~L~I~~v~ 136 (167)
..+.+|+++.|.|.+.+ .| .|.++|+| ++...+.. ..++|+.+..++ .|.|.+++
T Consensus 82 ~~P~~~~~~~~~~~~~g~~~~l~C~~~g---~p~~~~i~W~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~L~i~~v~ 154 (184)
T 3b5h_A 82 GPPRVKAVKSSEHINEGETAMLVCKSES---VPPVTDWAWYKITDSEDKALMN----GSESRFFVSSSQGRSELHIENLN 154 (184)
T ss_dssp CSCCCEESCSEEEECTTSCEEEEEECCC---SSCCCEEEEEECCSSSCEECCT----TGGGTEEEEEETTEEEEEECSCC
T ss_pred cCCceeecCCCcEEcCCCcEEEEEEECC---CCCCCeEEEEEcCCCCCEEeec----CCCCEEEEEecCCeeEEEEeecc
Confidence 34678999999999984 47 79999999 55333211 124778777655 79999999
Q ss_pred -cCCCCcceEEEeeecC
Q psy12724 137 -PEDGYKSYQCRTKHRL 152 (167)
Q Consensus 137 -~~D~~G~Y~C~a~n~~ 152 (167)
.+|+ |.|+|.|.|..
T Consensus 155 ~~~d~-G~Y~C~a~N~~ 170 (184)
T 3b5h_A 155 MEADP-GQYRCNGTSSK 170 (184)
T ss_dssp TTTSS-EEEEEEEEETT
T ss_pred ccccC-ceEEEEEEeCC
Confidence 9998 99999999988
No 20
>2v9r_A Roundabout homolog 1; proto-oncogene, differentiation, phosphorylation, disease MU neuronal development, immunoglobulin domain, chemotaxis; 2.00A {Homo sapiens} PDB: 2v9q_A
Probab=99.79 E-value=7.1e-19 Score=131.17 Aligned_cols=128 Identities=20% Similarity=0.305 Sum_probs=97.0
Q ss_pred eeceeeEEeEEEEEeCCcEEEEeecCCCCCCcceeeEEeeCCCceeee-------------cCCce-----------EEE
Q psy12724 10 SQYYEAQVYDVFVIKGNAAVFKCNLPSFVSDHLDVVSWADTDGGQYQI-------------DNQDF-----------VVS 65 (167)
Q Consensus 10 ~~~~~~~~~~~~v~~G~~~~l~C~a~~~~~~~~~~i~W~k~~~~~~~~-------------~~~~~-----------v~~ 65 (167)
.+.|...+.+..+.+|+++.|.|.+.+.+. +.+.|+|++. .+.. ++... -..
T Consensus 9 pp~i~~~p~~~~v~~G~~v~l~C~~~~~p~---~~v~W~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~ 84 (212)
T 2v9r_A 9 PPRIVEHPSDLIVSKGEPATLNCKAEGRPT---PTIEWYKGGE-RVETDKDDPRSHRMLLPSGSLFFLRIVHGRKSRPDE 84 (212)
T ss_dssp EEEEEECCCCEEECTTCCEEECCEEEEESC---CEEEEEETTE-ECCCTTTCTTCSEEECTTSCEEESSCCCCSSCCCSC
T ss_pred CcceecCCCceEEeCCCcEEEEEEcCCCCC---CEEEEEECCE-EeeccccccccceEEecCCcEEEEEEEecCCCcccC
Confidence 456888899999999999999999987665 3799999853 2221 11110 126
Q ss_pred eeeEEEecC---------------------------eEEEeCCcEEEEeee-CCccCCcceeEEEEeCCCeeeEEeeeec
Q psy12724 66 QSYTVNIMD---------------------------EHVLKGNSAVLKCHI-PSFVADYVAVESWISDQGEELFVDMTES 117 (167)
Q Consensus 66 g~y~c~~~~---------------------------~~v~~G~~a~l~C~~-~~~~~~p~p~i~W~k~~~~~l~~~~~~~ 117 (167)
|.|+|.+.+ ..+..|+++.|.|.+ . +.|.|.++|+|++ ..+. .
T Consensus 85 G~Y~C~~~n~~g~~~~~~~~l~V~~~~~~~~~~~~~~~~~~g~~~~l~C~~~~---~~p~~~v~W~~~~-~~l~-----~ 155 (212)
T 2v9r_A 85 GVYVCVARNYLGEAVSHDASLEVAILRDDFRQNPSDVMVAVGEPAVMECQPPR---GHPEPTISWKKDG-SPLD-----D 155 (212)
T ss_dssp EEEEEEEEETTEEEECCCEEEEECEECSSCSBCCCCEEEETTSCEEEECBCCC---EESCCEEEEEETT-EEEC-----T
T ss_pred eEEEEEEECCCCceeecceEEEEEeccccceeCCCceEecCCCcEEEEEecCC---CCCCCEEEEEECC-ccCC-----C
Confidence 999998632 345789999999998 5 4588999999997 4553 1
Q ss_pred CCceEEEccCCeEEEeecCcCCCCcceEEEeeecC
Q psy12724 118 TDGKYLVLPSGELHIRDVGPEDGYKSYQCRTKHRL 152 (167)
Q Consensus 118 ~~~r~~~~~~g~L~I~~v~~~D~~G~Y~C~a~n~~ 152 (167)
...++. ..++.|.|.+++.+|+ |.|+|.|.|..
T Consensus 156 ~~~~~~-~~~~~L~i~~~~~~d~-G~Y~C~a~N~~ 188 (212)
T 2v9r_A 156 KDERIT-IRGGKLMITYTRKSDA-GKYVCVGTNMV 188 (212)
T ss_dssp TSTTEE-EETTEEEESSCCGGGC-EEEEEEEEETT
T ss_pred CcceEE-ccCCeEEEeeCCHhhC-eeEEEEEeccc
Confidence 233443 4578999999999998 99999999987
No 21
>2v5m_A Dscam; neurobiology SPL immunoglobulin domain, cell adhesion, membrane, development protein; HET: NAG; 1.95A {Drosophila melanogaster} PDB: 2v5s_A* 2v5r_A*
Probab=99.79 E-value=1.5e-18 Score=140.86 Aligned_cols=142 Identities=47% Similarity=0.751 Sum_probs=103.4
Q ss_pred eeceeeEEeEE-EEEeCCcEEEEeecCCCCCCcceeeEEeeCCCceeeec---------CCceE------------EEee
Q psy12724 10 SQYYEAQVYDV-FVIKGNAAVFKCNLPSFVSDHLDVVSWADTDGGQYQID---------NQDFV------------VSQS 67 (167)
Q Consensus 10 ~~~~~~~~~~~-~v~~G~~~~l~C~a~~~~~~~~~~i~W~k~~~~~~~~~---------~~~~v------------~~g~ 67 (167)
.+.|..+|.+. .+.+|+++.|.|.+.+.|. |.++|+|+|+..+... +...+ ..|.
T Consensus 3 ~P~f~~~p~~~~~~~~G~~v~l~C~~~g~p~---p~v~W~k~~g~~~~~~~~~~~~~~~~~L~i~~~~~~d~~~~~d~G~ 79 (388)
T 2v5m_A 3 GPVFLKEPTNRIDFSNSTGAEIECKASGNPM---PEIIWIRSDGTAVGDVPGLRQISSDGKLVFPPFRAEDYRQEVHAQV 79 (388)
T ss_dssp EEEEEECCCSEEEEETTTCEEEECEEEEESC---CEEEEEETTSCBCCCBTTTBEECSTTEEEECCCCGGGCCHHHHEEE
T ss_pred CCchhhCCCceEEEEcCccEEEEEECCCCCC---CEEEEEcCCCCccccCCCceEEcCCceEEecccChhhccccccCce
Confidence 35678788764 4678999999999987765 4899999666555321 11111 1799
Q ss_pred eEEEecC--------------------------eEEEeCCcEEEEeeeCCccCCcceeEEEEeCCCeeeEEeeeecCCce
Q psy12724 68 YTVNIMD--------------------------EHVLKGNSAVLKCHIPSFVADYVAVESWISDQGEELFVDMTESTDGK 121 (167)
Q Consensus 68 y~c~~~~--------------------------~~v~~G~~a~l~C~~~~~~~~p~p~i~W~k~~~~~l~~~~~~~~~~r 121 (167)
|+|.+.+ ..+.+|+++.|.|.+.+..++|.+.++|+|++. .+.... ...++|
T Consensus 80 Y~C~a~n~~g~~~s~~~~v~v~~~p~~~~~~~~~~v~~G~~v~l~C~~~~~~~~~~~~v~W~~~~~-~~~~~~-~~~~~~ 157 (388)
T 2v5m_A 80 YACLARNQFGSIISRDVHVRAVVAQYYEADVNKEHVIRGNSAVIKCLIPSFVADFVEVVSWHTDEE-ENYFPG-AEYDGK 157 (388)
T ss_dssp EEEEEEETTEEEECCCEEEEEECCCCCCCBCCCEEEETTSCEEECCBCCTTTTTTEEEEEEEETTC-CEECSS-SCBTTT
T ss_pred EEEEEEccCCeEEecceEEEEccccccccCccceeeecCCcEEEEEECcCCCCCCcceEEEEeCCC-cccccc-cCCCCc
Confidence 9998742 346789999999999865445668999999984 432110 012568
Q ss_pred EEEccCCeEEEeecCcCCCCcceEEEeeecCcceE
Q psy12724 122 YLVLPSGELHIRDVGPEDGYKSYQCRTKHRLTGET 156 (167)
Q Consensus 122 ~~~~~~g~L~I~~v~~~D~~G~Y~C~a~n~~~~~~ 156 (167)
+.+..++.|.|.+++.+|+.|.|+|.|.|...++.
T Consensus 158 ~~~~~~~~L~i~~v~~~d~~G~Y~C~~~n~~~~~~ 192 (388)
T 2v5m_A 158 YLVLPSGELHIREVGPEDGYKSYQCRTKHRLTGET 192 (388)
T ss_dssp EEECTTSCEEESSCCGGGGGCCEEEEEEETTTCCE
T ss_pred EEEccCCcEEEecCCccccCeeEEEEeccCCCCce
Confidence 88888999999999999932899999999864443
No 22
>2c5d_C AXL oncogene, tyrosine-protein kinase receptor UFO; signaling protein/receptor, growth regulation/complex, vitamin K-dependent protein; HET: NAG; 3.3A {Homo sapiens}
Probab=99.79 E-value=4.1e-19 Score=131.66 Aligned_cols=135 Identities=13% Similarity=0.222 Sum_probs=98.4
Q ss_pred eeceeeEEeEEEEEeCCcEEEEeecC-CCCCCcceeeEEeeCCCceeeec----------C--------CceE-------
Q psy12724 10 SQYYEAQVYDVFVIKGNAAVFKCNLP-SFVSDHLDVVSWADTDGGQYQID----------N--------QDFV------- 63 (167)
Q Consensus 10 ~~~~~~~~~~~~v~~G~~~~l~C~a~-~~~~~~~~~i~W~k~~~~~~~~~----------~--------~~~v------- 63 (167)
.+.|...|.+..+.+|+++.|.|.+. +.+. +.+.|+|++. .+... . ...+
T Consensus 2 ~~~~~~~p~~~~v~~G~~v~l~C~~~~~~p~---~~v~W~~~g~-~l~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~ 77 (195)
T 2c5d_C 2 ESPFVGNPGNITGARGLTGTLRCQLQVQGEP---PEVHWLRDGQ-ILELADSTQTQVPLGEDEQDDWIVVSQLRITSLQL 77 (195)
T ss_dssp CCSEEECCCCEEECTTCCEEEEEEEEEESSC---CCCEEEETTE-ECCSCEEEEEEEECSSSTTSEEEEEEEEEESSCCS
T ss_pred CCeeccChhheEEecCCcEEEecccccCCCC---cEEEEEECCE-EcccCCCCceEEEEccccccceeeccEEEEEeccc
Confidence 35688899999999999999999998 7664 3799999753 33211 0 0111
Q ss_pred -EEeeeEEEecC--------------------------eEEEeCCcEEEEeeeCCccCCcce-eEEEEeCCCeeeEEeee
Q psy12724 64 -VSQSYTVNIMD--------------------------EHVLKGNSAVLKCHIPSFVADYVA-VESWISDQGEELFVDMT 115 (167)
Q Consensus 64 -~~g~y~c~~~~--------------------------~~v~~G~~a~l~C~~~~~~~~p~p-~i~W~k~~~~~l~~~~~ 115 (167)
..|.|+|.+.+ ..+.+|+++.|.|.+.+ .|.| .++|+|++ ..+..
T Consensus 78 ~d~G~Y~C~~~~~~~~~~~~~~~l~V~~~p~~~~~~~~~~~~~g~~~~l~C~~~g---~p~p~~v~W~~~~-~~~~~--- 150 (195)
T 2c5d_C 78 SDTGQYQCLVFLGHQTFVSQPGYVGLEGLPYFLEEPEDRTVAANTPFNLSCQAQG---PPEPVDLLWLQDA-VPLAT--- 150 (195)
T ss_dssp TTCEEEEEEEEETTEEEECCCEEEEECCSCEEEECCCCEEECTTCCEEEEEEEEC---SSCCCEEEEEESS-CBSSS---
T ss_pred cCCcEEEEEEEeCCCceecccEEEEEecCCeEEcCCCcEEEcCCCEEEEEeECCC---CCCCCEEEEEECC-EeccC---
Confidence 27999998632 34567999999999974 5888 89999997 45431
Q ss_pred ecCCceEEEccCCeEEEeecCcCCCCcceEEEeeecC----cceEEEeeeCC
Q psy12724 116 ESTDGKYLVLPSGELHIRDVGPEDGYKSYQCRTKHRL----TGETRLSATKG 163 (167)
Q Consensus 116 ~~~~~r~~~~~~g~L~I~~v~~~D~~G~Y~C~a~n~~----~~~~~l~~~~~ 163 (167)
..+. ..++.|.|.+++ |+ |.|+|.|.|.. +..+.|.+.|.
T Consensus 151 ---~~~~--~~~~~L~i~~~~--d~-G~Y~C~a~N~~g~~~s~~~~l~V~P~ 194 (195)
T 2c5d_C 151 ---APGH--GPQRSLHVPGLN--KT-SSFSCEAHNAKGVTTSRTATITVLPQ 194 (195)
T ss_dssp ---STTS--SCCEEEEECCCS--SC-EEEEEEEEETTEEEECCCEEEEEC--
T ss_pred ---CCCc--CCCCeEEEcccc--cC-ceEEEEEEcCCCceEEEEEEEEEecC
Confidence 1211 457789999998 88 99999999987 34566666554
No 23
>1f2q_A High affinity immunoglobulin epsilon receptor ALP subunit; immunoglobulin fold, glycoprotein, IGE-binding Pro immune system; HET: NAG MAN; 2.40A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 PDB: 1j86_A* 1rpq_A* 2y7q_A* 1f6a_A* 1j88_A* 1j89_A* 1j87_A*
Probab=99.79 E-value=7e-19 Score=129.13 Aligned_cols=133 Identities=19% Similarity=0.216 Sum_probs=95.2
Q ss_pred eceeeEEeEEEEEeCCcEEEEeecCCCCCCcceeeEEeeCCCceeeecCCc-eE------EEeeeEEEecC---------
Q psy12724 11 QYYEAQVYDVFVIKGNAAVFKCNLPSFVSDHLDVVSWADTDGGQYQIDNQD-FV------VSQSYTVNIMD--------- 74 (167)
Q Consensus 11 ~~~~~~~~~~~v~~G~~~~l~C~a~~~~~~~~~~i~W~k~~~~~~~~~~~~-~v------~~g~y~c~~~~--------- 74 (167)
+.+...+.+..+.+|+++.|.|.+.+.+.+ ..+.|+|++. .+..+... .+ ..|.|+|.+.+
T Consensus 5 P~i~~~p~~~~v~~G~~v~L~C~~~~~~~~--~~i~W~~~~~-~~~~~~~~L~i~~v~~~d~G~Y~C~~~~~~~s~~~~l 81 (176)
T 1f2q_A 5 PKVSLNPPWNRIFKGENVTLTCNGNNFFEV--SSTKWFHNGS-LSEETNSSLNIVNAKFEDSGEYKCQHQQVNESEPVYL 81 (176)
T ss_dssp CCCEEESSCSEEETTCCEEEECCTTCC------CCEEEETTE-ECSCCSSEEEECSCCGGGCEEEEEECTTSSCCCCEEE
T ss_pred CEEEcCCCCcceecCCcEEEEEeCCCCCCc--ceEEEEECCe-ECCCCceEEEEeccceecCEEEEEEcCCccccccEEE
Confidence 456778888899999999999999988653 2589999854 33222111 11 27999998743
Q ss_pred -------------eEEEeCCcEEEEeeeCCccCCcceeEEEEeCCCeeeEEeeeecCCceEEEccCCeEEEeecCcCCCC
Q psy12724 75 -------------EHVLKGNSAVLKCHIPSFVADYVAVESWISDQGEELFVDMTESTDGKYLVLPSGELHIRDVGPEDGY 141 (167)
Q Consensus 75 -------------~~v~~G~~a~l~C~~~~~~~~p~p~i~W~k~~~~~l~~~~~~~~~~r~~~~~~g~L~I~~v~~~D~~ 141 (167)
..+.+|+++.|.|.+.+ +.|.|.++|+||+ ..+.. . ..++.|.|.+++.+|+
T Consensus 82 ~V~~~~~~~~~~~~~~~~g~~~~l~C~~~~--~~p~~~~~W~~~g-~~~~~------~-----~~~~~L~i~~v~~~d~- 146 (176)
T 1f2q_A 82 EVFSDWLLLQASAEVVMEGQPLFLRCHGWR--NWDVYKVIYYKDG-EALKY------W-----YENHNISITNATVEDS- 146 (176)
T ss_dssp EEECSSEEEEESCSEEETTSCEEEEEEEGG--GCCEEEEEEEETT-EECCS------C-----CCSSEEEESSCCGGGC-
T ss_pred EEeCcceeecCCcceeeCCCCEEEEEEecC--CCCceEEEEEECC-EEEee------e-----cCCCeEEECCCCcccC-
Confidence 24568999999999953 3577899999987 44421 1 1357899999999999
Q ss_pred cceEEEeeecC----cceEEEeee
Q psy12724 142 KSYQCRTKHRL----TGETRLSAT 161 (167)
Q Consensus 142 G~Y~C~a~n~~----~~~~~l~~~ 161 (167)
|.|+|.|.|.. +..+.|.+.
T Consensus 147 G~Y~C~a~n~~~~~~s~~~~l~V~ 170 (176)
T 1f2q_A 147 GTYYCTGKVWQLDYESEPLNITVI 170 (176)
T ss_dssp EEEEEEEEETTEEEECCCEEEEEE
T ss_pred EEEEEEEEeCCcceEecCEEEEEe
Confidence 99999999963 334555553
No 24
>1qz1_A Neural cell adhesion molecule 1, 140 kDa isoform; IG modules, NCAM; 2.00A {Rattus norvegicus} SCOP: b.1.1.4 b.1.1.4 b.1.1.4 PDB: 1ie5_A
Probab=99.78 E-value=1.8e-18 Score=134.96 Aligned_cols=140 Identities=19% Similarity=0.278 Sum_probs=98.9
Q ss_pred eceeeEEeEEEEEeCCcEEEEeecCCCCCCcceeeEEeeCCCceeeecCCc-------eE--------EEeeeEEEecC-
Q psy12724 11 QYYEAQVYDVFVIKGNAAVFKCNLPSFVSDHLDVVSWADTDGGQYQIDNQD-------FV--------VSQSYTVNIMD- 74 (167)
Q Consensus 11 ~~~~~~~~~~~v~~G~~~~l~C~a~~~~~~~~~~i~W~k~~~~~~~~~~~~-------~v--------~~g~y~c~~~~- 74 (167)
+.|...+.+..+.+|+++.|.|.+.+.|.+ .+.|++++.........+ .+ ..|.|+|.+.+
T Consensus 101 ~~~~~~~~~~~~~~g~~v~l~C~~~~~p~~---~v~W~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~n~ 177 (291)
T 1qz1_A 101 LMFKNAPTPQEFKEGEDAVIVCDVVSSLPP---TIIWKHKGRDVILKKDVRFIVLSNNYLQIRGIKKTDEGTYRCEGRIL 177 (291)
T ss_dssp SEEEECCSSEEEETTSCEEECCEEECSSCC---EEEEEETTSCSSTTCCTTEEECTTSCEEETTCCGGGCEEEEEEEEEG
T ss_pred ccccCCCCcccccCCCeEEEEEEeccCCCC---EEEEEECCEEcccCCCceEEEccCCcEEEccCccccCeEEEEEEEec
Confidence 345666778889999999999999888653 799999865322111111 11 26999998632
Q ss_pred ----------------------------eEEEeCCcEEEEeeeCCccCCcceeEEEEeCCCeeeEEeeeecCCceEEEcc
Q psy12724 75 ----------------------------EHVLKGNSAVLKCHIPSFVADYVAVESWISDQGEELFVDMTESTDGKYLVLP 126 (167)
Q Consensus 75 ----------------------------~~v~~G~~a~l~C~~~~~~~~p~p~i~W~k~~~~~l~~~~~~~~~~r~~~~~ 126 (167)
..+.+|+++.|.|.+.+ .|.|.++|+|++ ..+.... ....++....
T Consensus 178 ~~~~~~~~~~~l~v~~~p~~~~~~~~~~~~~~~g~~v~l~C~~~g---~p~p~i~W~~~g-~~~~~~~--~~~~~~~~~~ 251 (291)
T 1qz1_A 178 ARGEINFKDIQVIVNVPPTVQARQSIVNATANLGQSVTLVCDADG---FPEPTMSWTKDG-EPIENEE--EDDEKHIFSD 251 (291)
T ss_dssp GGTEEEEEEEEEEEEEEEEEEESCSEEEEETTSCCCEEEEEEEEE---ESCCEEEEEETT-EECCCC----CCSSEEECT
T ss_pred CCCceeeEEEEEEEecCCcccccccccccccccCceEEEEEEEEE---eCCCcEEEEECC-EECcCCC--CCCcceEEcC
Confidence 12246999999999974 588999999997 5553210 0124666665
Q ss_pred CC-eEEEeecCcCCCCcceEEEeeecC---cceEEEee
Q psy12724 127 SG-ELHIRDVGPEDGYKSYQCRTKHRL---TGETRLSA 160 (167)
Q Consensus 127 ~g-~L~I~~v~~~D~~G~Y~C~a~n~~---~~~~~l~~ 160 (167)
++ .|.|.+++.+|+ |.|+|.|.|.. +..+.|.+
T Consensus 252 ~~~~L~i~~v~~~d~-G~Y~C~a~N~~G~~~~~~~l~V 288 (291)
T 1qz1_A 252 DSSELTIRNVDKNDE-AEYVCIAENKAGEQDASIHLKV 288 (291)
T ss_dssp TSCEEEECSCCGGGC-EEEEEEEEETTEEEEEEEEEEE
T ss_pred CCcEEEEEecChhcC-EEEEEEEEeCCCceEEEEEEEE
Confidence 44 799999999998 99999999987 33444544
No 25
>2wim_A N-CAM 2, NCAM2, neural cell adhesion molecule 2; cell membrane, transmembrane, immunoglobulin; HET: NDG NAG; 3.00A {Homo sapiens}
Probab=99.78 E-value=2.6e-18 Score=134.11 Aligned_cols=130 Identities=18% Similarity=0.360 Sum_probs=100.1
Q ss_pred eeceeeEEeEEEEEeCCcEEEEeecCCCCCCcceeeEEeeCCCceeeecCC--------c-eE--------EEeeeEEEe
Q psy12724 10 SQYYEAQVYDVFVIKGNAAVFKCNLPSFVSDHLDVVSWADTDGGQYQIDNQ--------D-FV--------VSQSYTVNI 72 (167)
Q Consensus 10 ~~~~~~~~~~~~v~~G~~~~l~C~a~~~~~~~~~~i~W~k~~~~~~~~~~~--------~-~v--------~~g~y~c~~ 72 (167)
.+.+...+.+..+.+|+++.|.|.+.+.+. .+.|+|+++..+..+.. . .+ ..|.|+|.+
T Consensus 4 ~p~v~~~~~~~~v~~G~~v~l~C~~~~~p~----~v~W~~~~g~~~~~~~~~~~~~~~~~~~L~i~~~~~~D~G~Y~C~~ 79 (291)
T 2wim_A 4 LLQVTISLSKVELSVGESKFFTCTAIGEPE----SIDWYNPQGEKIISTQRVVVQKEGVRSRLTIYNANIEDAGIYRCQA 79 (291)
T ss_dssp CCEEEESCSEEEEETTCCEEEEEEEESCCS----EEECBCTTCCBCCCBTTEEEEEETTEEEEEECSCCGGGCEEEEEEE
T ss_pred CceEEEeccceEecCCCcEEEEEEEeCCCC----ceEEECCCCcCccCCCcEEEecCCCEEEEEEccCCcccCEEEEEEE
Confidence 456888899999999999999999987653 59999976655533211 1 11 179999987
Q ss_pred cC--------------------------eEEEeCCcEEEEeeeCCccCCcceeEEEEeCCCeeeEEeeeecCCceEEEcc
Q psy12724 73 MD--------------------------EHVLKGNSAVLKCHIPSFVADYVAVESWISDQGEELFVDMTESTDGKYLVLP 126 (167)
Q Consensus 73 ~~--------------------------~~v~~G~~a~l~C~~~~~~~~p~p~i~W~k~~~~~l~~~~~~~~~~r~~~~~ 126 (167)
.+ ..+.+|+++.|.|.+.+ .|.|.++|+|++ ..+.. ....++.+..
T Consensus 80 ~n~~g~~~~~~~~l~v~~~~~~~~~~~~~~v~~G~~v~l~C~~~~---~p~~~v~W~~~~-~~~~~----~~~~~~~~~~ 151 (291)
T 2wim_A 80 TDAKGQTQEATVVLEIYQKLTFREVVSPQEFKQGEDAEVVCRVSS---SPAPAVSWLYHN-EEVTT----ISDNRFAMLA 151 (291)
T ss_dssp ECSSSCEEEEEEEEEEECCCBCCSCCCSEEEETTSCEEECCCCBC---SSCCEEEEECC-----CB----CCCSSEEECT
T ss_pred ecccCceEEEEEEEEecCCcceEeCCCChhhcCCCCEEEEEEEcc---CCCCEEEEEECC-ccccc----cCCceEEEcc
Confidence 32 34678999999999974 588899999997 44432 1467888888
Q ss_pred CCeEEEeecCcCCCCcceEEEeeecC
Q psy12724 127 SGELHIRDVGPEDGYKSYQCRTKHRL 152 (167)
Q Consensus 127 ~g~L~I~~v~~~D~~G~Y~C~a~n~~ 152 (167)
++.|.|.+++.+|+ |.|+|.|.|..
T Consensus 152 ~~~L~i~~v~~~d~-G~Y~C~~~n~~ 176 (291)
T 2wim_A 152 NNNLQILNINKSDE-GIYRCEGRVEA 176 (291)
T ss_dssp TSCEEETTCCGGGC-EEEEEEEEETT
T ss_pred CCCEEEEecchhhC-EEEEEEEEECC
Confidence 99999999999999 99999999976
No 26
>2wv3_A Neuroplastin; igcam, membrane, glycoprotein, cell membrane, cell adhesion, transmembrane, disulfide bond, alternative splicing; HET: NAG; 1.95A {Rattus norvegicus}
Probab=99.77 E-value=8.8e-18 Score=124.12 Aligned_cols=127 Identities=18% Similarity=0.284 Sum_probs=92.7
Q ss_pred EeEEEEEe-CCcEEEEeecCCCCCCcceeeEEeeCCCceeeecCC----ceE--------EEeeeEEEecC---------
Q psy12724 17 VYDVFVIK-GNAAVFKCNLPSFVSDHLDVVSWADTDGGQYQIDNQ----DFV--------VSQSYTVNIMD--------- 74 (167)
Q Consensus 17 ~~~~~v~~-G~~~~l~C~a~~~~~~~~~~i~W~k~~~~~~~~~~~----~~v--------~~g~y~c~~~~--------- 74 (167)
+.+..+.+ |+++.|.|.+.+.+.+ .+.+.|+|++. .+..+.. ..+ ..|.|+|.+.+
T Consensus 9 ~~~~~v~~~G~~v~l~C~~~~~~~~-~~~v~W~~~~~-~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~~~n~~~~~~~~~ 86 (190)
T 2wv3_A 9 SEEVIIRDSLLPVTLQCNLTSSSHT-LMYSYWTKNGV-ELTATRKNASNMEYRINKPRAEDSGEYHCVYHFVSAPKANAT 86 (190)
T ss_dssp CCCEECCCSSSCEEEEEEEEECSSC-EEEEEEEETTE-ECTTCCBCCSEEEEEESSCCGGGCEEEEEEEEETTEEEEEEE
T ss_pred cceEEEccCCceEEEEEEeccCCCC-ceEEEEEECCE-ECcccceEeccEEEEEecCCcccCEEEEEEEEeCCcccccEE
Confidence 45566777 9999999999887753 46899999853 3322111 111 27999998732
Q ss_pred ---------------eEEEeCCcEEEEeeeCCccCCcceeEEEEeC-CCeeeEEeeeecCCceEEEccCC---eEEEeec
Q psy12724 75 ---------------EHVLKGNSAVLKCHIPSFVADYVAVESWISD-QGEELFVDMTESTDGKYLVLPSG---ELHIRDV 135 (167)
Q Consensus 75 ---------------~~v~~G~~a~l~C~~~~~~~~p~p~i~W~k~-~~~~l~~~~~~~~~~r~~~~~~g---~L~I~~v 135 (167)
..+.+|+++.|.|.+. |.|.|.++|+|+ ++..+... ..++++.+..++ .|.|.++
T Consensus 87 l~V~~~p~~~~~~~~~~~~~g~~v~l~C~~~---g~p~p~i~W~~~~~g~~~~~~---~~~~~~~~~~~~~~~~L~i~~~ 160 (190)
T 2wv3_A 87 IEVKAAPDITGHKRSENKNEGQDAMMYCKSV---GYPHPEWMWRKKENGVFEEIS---NSSGRFFIINKENYTELNIVNL 160 (190)
T ss_dssp EEEECCCEEEEECSEEEEETTSCEEEEEEEE---CSSCCEEEEEEEETTEEEECC---CTTSCEEEEECSSEEEEEECSC
T ss_pred EEEecCCcccccCCcceeeCCCcEEEEEEeC---ccCCCceEEEEcCCCceeeee---cCCCeEEEecCCCeeEEEEEec
Confidence 2457899999999997 458999999994 22444211 246777776554 6999999
Q ss_pred C-cCCCCcceEEEeeecC
Q psy12724 136 G-PEDGYKSYQCRTKHRL 152 (167)
Q Consensus 136 ~-~~D~~G~Y~C~a~n~~ 152 (167)
+ .+|+ |.|+|.|.|..
T Consensus 161 ~~~~d~-G~Y~C~a~N~~ 177 (190)
T 2wv3_A 161 QITEDP-GEYECNATNSI 177 (190)
T ss_dssp CTTTSC-EEEEEEEECSS
T ss_pred cccCCC-EEEEEEEEecC
Confidence 9 7998 99999999987
No 27
>1f97_A Junction adhesion molecule; immunoglobulin superfamily, beta-sandwich fold, cell adhesion; 2.50A {Mus musculus} SCOP: b.1.1.1 b.1.1.4
Probab=99.77 E-value=7.5e-18 Score=125.37 Aligned_cols=143 Identities=22% Similarity=0.321 Sum_probs=99.9
Q ss_pred ceeeEEeEEEEEeCCcEEEEeecCCCCCCcceeeEEeeCCCceee----------ecCCce------E--------EEee
Q psy12724 12 YYEAQVYDVFVIKGNAAVFKCNLPSFVSDHLDVVSWADTDGGQYQ----------IDNQDF------V--------VSQS 67 (167)
Q Consensus 12 ~~~~~~~~~~v~~G~~~~l~C~a~~~~~~~~~~i~W~k~~~~~~~----------~~~~~~------v--------~~g~ 67 (167)
.|...+.+..+.+|+++.|.|.+.+.+. +.+.|+|++..... ....+. + ..|.
T Consensus 3 ~v~~~~~~~~v~~G~~v~L~C~~~~~p~---~~v~W~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~L~i~~v~~~D~G~ 79 (212)
T 1f97_A 3 SVYTAQSDVQVPENESIKLTCTYSGFSS---PRVEWKFVQGSTTALVCYNSQITAPYADRVTFSSSGITFSSVTRKDNGE 79 (212)
T ss_dssp EEECSCSEEEEETTCCEEEECEEESCSS---EEEEEEEEETTEEEEEEETTEECGGGTTTEEEETTEEEESCCCGGGCEE
T ss_pred eEEecCCCeEEEcCCCEEEEeEeCCCCC---cEEEEEECCCceeeEEecCCcccccccCcEEeeceeEEEcccCcccCeE
Confidence 3566788899999999999999987654 58999998765211 011111 1 2799
Q ss_pred eEEEecC---------------------------eEEEeCCcEEEEee-eCCccCCcceeEEEEeCCCe-eeEEeee---
Q psy12724 68 YTVNIMD---------------------------EHVLKGNSAVLKCH-IPSFVADYVAVESWISDQGE-ELFVDMT--- 115 (167)
Q Consensus 68 y~c~~~~---------------------------~~v~~G~~a~l~C~-~~~~~~~p~p~i~W~k~~~~-~l~~~~~--- 115 (167)
|+|.+.+ ..+.+|+++.|.|. +. +.|.|.++|+|++ . .+.....
T Consensus 80 Y~C~~~~~~g~~~~~~~~~l~V~~~p~~~~~~~~~~~~~g~~~~l~C~~~~---~~p~~~i~W~~~~-~~~l~~~~~~~~ 155 (212)
T 1f97_A 80 YTCMVSEEGGQNYGEVSIHLTVLVPPSKPTISVPSSVTIGNRAVLTCSEHD---GSPPSEYSWFKDG-ISMLTADAKKTR 155 (212)
T ss_dssp EEEEEEETTSSSEEEEEEEEEEEBCCCCCEEECCSEEETTSCEEEEEECSC---CBSCCEEEEEETT-EESBC-----CB
T ss_pred EEEEEEccCCCcccEEEEEEEEEcCCCCcccCCccccCCCCeEEEEEEccc---CcCCCEEEEEeCC-cccccccccccc
Confidence 9998642 23568999999999 56 4589999999997 5 5532110
Q ss_pred ecCCceEEEc-cCCeEEEeecCcCCCCcceEEEeeecC-----cceEEEeeeC
Q psy12724 116 ESTDGKYLVL-PSGELHIRDVGPEDGYKSYQCRTKHRL-----TGETRLSATK 162 (167)
Q Consensus 116 ~~~~~r~~~~-~~g~L~I~~v~~~D~~G~Y~C~a~n~~-----~~~~~l~~~~ 162 (167)
.....++... .++.|.|.+++.+|+ |.|+|.|.|.. +..+.|.+.+
T Consensus 156 ~~~~~~~~~~~~~~~L~i~~~~~~d~-G~Y~C~a~n~~g~~~~s~~~~l~V~~ 207 (212)
T 1f97_A 156 AFMNSSFTIDPKSGDLIFDPVTAFDS-GEYYCQAQNGYGTAMRSEAAHMDAVE 207 (212)
T ss_dssp SCSSSCEEECTTTCCEEESSCCGGGC-EEEEEEEECSSSCCEECCCEEEEEES
T ss_pred cccCceeEecCCCceEEEEecChhhC-cEEEEEEccccCCccccceEEEEEEE
Confidence 0011345553 467899999999999 99999999987 2345666544
No 28
>3kld_A Contactin 4, axcam, BIG-2; cell adhesion, protein complex, receptor protein tyrosine phosphatase; HET: NAG; 2.00A {Mus musculus} PDB: 3jxa_A*
Probab=99.77 E-value=2.3e-18 Score=140.99 Aligned_cols=130 Identities=15% Similarity=0.304 Sum_probs=98.4
Q ss_pred eeceeeEEeEEEE---EeCCcEEEEeecCCCCCCcceeeEEeeCCCceeeec---------CCceE-------EEeeeEE
Q psy12724 10 SQYYEAQVYDVFV---IKGNAAVFKCNLPSFVSDHLDVVSWADTDGGQYQID---------NQDFV-------VSQSYTV 70 (167)
Q Consensus 10 ~~~~~~~~~~~~v---~~G~~~~l~C~a~~~~~~~~~~i~W~k~~~~~~~~~---------~~~~v-------~~g~y~c 70 (167)
.+.|..+|.+..+ .+|+++.|.|.+.+.|.+ .|+|+|++. .+... +...+ .+|.|+|
T Consensus 5 ~P~f~~~P~~~~~~~~~eg~~v~L~C~~~g~P~p---~i~W~k~g~-~l~~~~~~~~~~~~g~l~i~~~~~~~D~G~Y~C 80 (384)
T 3kld_A 5 GPVFVQEPSHVMFPLDSEEKKVKLSCEVKGNPKP---HIRWKLNGT-DVDIGMDFRYSVVDGSLLINNPNKTQDAGTYQC 80 (384)
T ss_dssp EEEEEECCCCEEEETTCSCSEEEECCEEEEESCC---EEEEEETTE-ECCC----CEEEETTEEEEESCCHHHHCEEEEE
T ss_pred CCEEEeCCcceEeecCCCCCeEEEEeEecCCCCC---EEEEEECCE-ECcCCCCccEEEECCEEEEcCCCCcccCEEEEE
Confidence 5678899999887 588999999999988764 899999853 33221 11111 2799999
Q ss_pred EecC---------------------------eEEEeCCcEEEEeeeCCccCCcceeEEEEeCCCeeeEEeeeecCCceEE
Q psy12724 71 NIMD---------------------------EHVLKGNSAVLKCHIPSFVADYVAVESWISDQGEELFVDMTESTDGKYL 123 (167)
Q Consensus 71 ~~~~---------------------------~~v~~G~~a~l~C~~~~~~~~p~p~i~W~k~~~~~l~~~~~~~~~~r~~ 123 (167)
.+.| ..+.+|+++.|.|.++. +.|.+.++|++++ ..+.. ...++.
T Consensus 81 ~A~N~~G~~~s~~~~l~v~~~~~~~~~~~~~~~v~~G~~~~l~C~~~~--~~~~~~~~W~~~~-~~~~~-----~~~~~~ 152 (384)
T 3kld_A 81 IATNSFGTIVSREAKLQFAYLENFKTRTRSTVSVRRGQGMVLLCGPPP--HSGELSYAWIFNE-YPSYQ-----DNRRFV 152 (384)
T ss_dssp EEEETTEEEECCCEEEEEEEECCCSCCCCCCEEEEETCCEEECCCCCS--EESCEEEEEEETT-EECCC-----SSSEEE
T ss_pred EEEcCcccEEecceEEEEecccccccCCCCceeEEcCCCeEEecCCCC--CCCCeEEEEEECC-CCCEe-----eccEEE
Confidence 8743 34678999999998753 3467899999997 44431 344555
Q ss_pred EccCCeEEEeecCcCCCCcceEEEeeecC
Q psy12724 124 VLPSGELHIRDVGPEDGYKSYQCRTKHRL 152 (167)
Q Consensus 124 ~~~~g~L~I~~v~~~D~~G~Y~C~a~n~~ 152 (167)
...+|.|.|.+++.+|+ |.|+|.|.|..
T Consensus 153 ~~~~~~L~I~~v~~~D~-G~Y~C~a~n~~ 180 (384)
T 3kld_A 153 SQETGNLYIAKVEKSDV-GNYTCVVTNTV 180 (384)
T ss_dssp CTTTCCEEESSCCGGGC-EEEEEEEEETT
T ss_pred EcCCCcEEEeecCHHHC-ceEEEEEeccc
Confidence 55688999999999999 99999999976
No 29
>2ny1_B T-cell surface glycoprotein CD4; HIV, GP120, CD4, viral protein-immune system compl; HET: NAG SUC; 1.99A {Homo sapiens} SCOP: b.1.1.1 b.1.1.3 PDB: 2nxz_B* 2ny0_B* 2nxy_B* 2ny2_B* 2ny3_B* 2ny4_B* 2ny5_C* 2ny6_B* 3jwd_C* 3jwo_C* 1g9m_C* 1g9n_C* 1gc1_C* 1rzj_C* 1rzk_C* 3o2d_A 3cd4_A 3lqa_C* 2b4c_C* 2qad_B* ...
Probab=99.77 E-value=1.5e-17 Score=122.45 Aligned_cols=121 Identities=17% Similarity=0.232 Sum_probs=90.4
Q ss_pred EEEEEeCCcEEEEeecCCCCCCcceeeEEeeCCCceeee-------------------------cCCceE--------EE
Q psy12724 19 DVFVIKGNAAVFKCNLPSFVSDHLDVVSWADTDGGQYQI-------------------------DNQDFV--------VS 65 (167)
Q Consensus 19 ~~~v~~G~~~~l~C~a~~~~~~~~~~i~W~k~~~~~~~~-------------------------~~~~~v--------~~ 65 (167)
.+.+.+|+++.|.|.+.+.+. +.+.|+|++...+.. ++...+ .+
T Consensus 4 ~v~~~~G~~v~L~C~~~~~~~---~~i~W~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~L~i~~v~~~D~ 80 (184)
T 2ny1_B 4 VVLGKKGDTVELTCTASQKKS---IQFHWKNSNQIKILGNQGSFLTKGPSKLNDRADSRRSLWDQGNFPLIIKNLKIEDS 80 (184)
T ss_dssp EEEEETTSCEEECCBCSSSSC---CCEEEEETTCCEEEEEETTEEEECSCTTGGGEECCGGGGGGTBCCEEECSCCGGGC
T ss_pred cEEEeCCCCEEEEEEEcCCCc---eEEEEEeCCccceEEecCceEecCChhhCCccccccccccCCeEEEEEecCCHHHC
Confidence 467899999999999986654 479999997643321 011112 27
Q ss_pred eeeEEEecC-----------------eEEEeCCcEEEEeeeCCccCCcceeEEEEeCCCeeeEEeeeecCCceEEEccCC
Q psy12724 66 QSYTVNIMD-----------------EHVLKGNSAVLKCHIPSFVADYVAVESWISDQGEELFVDMTESTDGKYLVLPSG 128 (167)
Q Consensus 66 g~y~c~~~~-----------------~~v~~G~~a~l~C~~~~~~~~p~p~i~W~k~~~~~l~~~~~~~~~~r~~~~~~g 128 (167)
|.|+|.+.+ ..+.+|+++.|.|.+.+ +|.|.++|+++++ .+. ..++
T Consensus 81 G~Y~C~~~~~~~~~~l~V~~~~~~~~~~v~~g~~~~l~C~~~~---~p~~~v~W~~~~~-~~~-------------~~~~ 143 (184)
T 2ny1_B 81 DTYICEVEDQKEEVQLLVFGLTANSDTHLLQGQSLTLTLESPP---GSSPSVQCRSPRG-KNI-------------QGGK 143 (184)
T ss_dssp EEEEEEETTEEEEEEEEEEEEEESSCSEEETTCCEEEEEECCT---TCCCEEEEECTTS-CEE-------------EESS
T ss_pred EEEEEEEEcCCCcEEEEEEEecCCCCceeecCCCEEEEEEcCC---CCCCEEEEEeCCC-ccc-------------cCce
Confidence 999998754 34678999999999984 4899999999873 221 2467
Q ss_pred eEEEeecCcCCCCcceEEEeeecC---cceEEEee
Q psy12724 129 ELHIRDVGPEDGYKSYQCRTKHRL---TGETRLSA 160 (167)
Q Consensus 129 ~L~I~~v~~~D~~G~Y~C~a~n~~---~~~~~l~~ 160 (167)
.|.|.+++.+|+ |.|+|.|.|.. +..+.|.+
T Consensus 144 ~L~i~~v~~~d~-G~Y~C~a~n~~~~~~~~~~l~V 177 (184)
T 2ny1_B 144 TLSVSQLELQDS-GTWTCTVLQNQKKVEFKIDIVV 177 (184)
T ss_dssp EEEESSCCGGGC-EEEEEEEEETTEEEEEEEEEEE
T ss_pred EEEEecCCcCCC-eEEEEEEEECCceEEEEEEEEE
Confidence 899999999999 99999999976 33444544
No 30
>2wim_A N-CAM 2, NCAM2, neural cell adhesion molecule 2; cell membrane, transmembrane, immunoglobulin; HET: NDG NAG; 3.00A {Homo sapiens}
Probab=99.77 E-value=5.1e-18 Score=132.40 Aligned_cols=136 Identities=18% Similarity=0.301 Sum_probs=96.8
Q ss_pred ceeeEEeEEEEEeCCcEEEEeecCCCCCCcceeeEEeeCCCceeeecCCc-------eE--------EEeeeEEEecC--
Q psy12724 12 YYEAQVYDVFVIKGNAAVFKCNLPSFVSDHLDVVSWADTDGGQYQIDNQD-------FV--------VSQSYTVNIMD-- 74 (167)
Q Consensus 12 ~~~~~~~~~~v~~G~~~~l~C~a~~~~~~~~~~i~W~k~~~~~~~~~~~~-------~v--------~~g~y~c~~~~-- 74 (167)
.|...+.+..+.+|+++.|.|.+.+.+.+ .+.|++++.........+ .+ ..|.|+|.+.+
T Consensus 100 ~~~~~~~~~~v~~G~~v~l~C~~~~~p~~---~v~W~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~~~n~~ 176 (291)
T 2wim_A 100 TFREVVSPQEFKQGEDAEVVCRVSSSPAP---AVSWLYHNEEVTTISDNRFAMLANNNLQILNINKSDEGIYRCEGRVEA 176 (291)
T ss_dssp BCCSCCCSEEEETTSCEEECCCCBCSSCC---EEEEECC----CBCCCSSEEECTTSCEEETTCCGGGCEEEEEEEEETT
T ss_pred ceEeCCCChhhcCCCCEEEEEEEccCCCC---EEEEEECCccccccCCceEEEccCCCEEEEecchhhCEEEEEEEEECC
Confidence 35566677889999999999999987754 799999865322211111 11 27999998632
Q ss_pred ---------------------------eEEEeCCcEEEEeeeCCccCCcceeEEEEeCCCeeeEEeeeecCCceEEEcc-
Q psy12724 75 ---------------------------EHVLKGNSAVLKCHIPSFVADYVAVESWISDQGEELFVDMTESTDGKYLVLP- 126 (167)
Q Consensus 75 ---------------------------~~v~~G~~a~l~C~~~~~~~~p~p~i~W~k~~~~~l~~~~~~~~~~r~~~~~- 126 (167)
..+.+|+++.|.|.+.+ .|.|.++|+|++ ..+. .+.++.+..
T Consensus 177 ~~~~~~~~~~~~v~~~p~~~~~~~~~~~~~~~g~~~~l~C~~~g---~p~p~v~W~~~g-~~~~------~~~~~~~~~~ 246 (291)
T 2wim_A 177 RGEIDFRDIIVIVNVPPAISMPQKSFNATAERGEEMTFSCRASG---SPEPAISWFRNG-KLIE------ENEKYILKGS 246 (291)
T ss_dssp TTEEEEEEEEEEEEBCCCCBCSCSEEECCSSSCCEEEEECBCCC---BSCCEEEEEETT-EECC------CTTTEEECST
T ss_pred CCeeEEeeEEEEeccCCccccCcccccceecCCCeEEEEEEeec---CCCCeEEEEECC-EECc------CCccEEEcCC
Confidence 12236999999999984 589999999997 4553 345665554
Q ss_pred CCeEEEeecCcCCCCcceEEEeeecC---cceEEEeee
Q psy12724 127 SGELHIRDVGPEDGYKSYQCRTKHRL---TGETRLSAT 161 (167)
Q Consensus 127 ~g~L~I~~v~~~D~~G~Y~C~a~n~~---~~~~~l~~~ 161 (167)
++.|.|.+++.+|+ |.|+|.|.|.. ...+.|.++
T Consensus 247 ~~~L~i~~~~~~d~-G~Y~C~a~N~~G~~~~~~~l~v~ 283 (291)
T 2wim_A 247 NTELTVRNIINSDG-GPYVCRATNKAGEDEKQAFLQVF 283 (291)
T ss_dssp TCEEEEESCCSTTC-EEEEEEEEETTEEEEEEEEEEC-
T ss_pred ccEEEEeeCCcccC-EEEEEEEEECCCceeeeEEEEEE
Confidence 56899999999998 99999999998 444555543
No 31
>1oll_A NK receptor; immune system/receptor, NK cell triggering receptor, immune system, IG domain, cytotoxicity, C2-type IG-like domains; 1.93A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4
Probab=99.77 E-value=5e-18 Score=126.24 Aligned_cols=132 Identities=12% Similarity=0.109 Sum_probs=91.5
Q ss_pred eceeeEEeEEEEEeCCcEEEEeecCCCCCCcceeeEEeeCCCceeeec-------CCc-eE--------EEeeeEEEecC
Q psy12724 11 QYYEAQVYDVFVIKGNAAVFKCNLPSFVSDHLDVVSWADTDGGQYQID-------NQD-FV--------VSQSYTVNIMD 74 (167)
Q Consensus 11 ~~~~~~~~~~~v~~G~~~~l~C~a~~~~~~~~~~i~W~k~~~~~~~~~-------~~~-~v--------~~g~y~c~~~~ 74 (167)
+.+...|.. .|.+|+++.|.|.+.+.+ +.+.|+|++.. +... ... .+ .+|.|+|.+.+
T Consensus 5 P~i~~~p~~-~v~~G~~v~L~C~~~~~~----~~~~w~k~g~~-~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~~~~ 78 (188)
T 1oll_A 5 PFIWAEPHF-MVPKEKQVTICCQGNYGA----VEYQLHFEGSL-FAVDRPKPPERINKVKFYIPDMNSRMAGQYSCIYRV 78 (188)
T ss_dssp CEEEEESCS-EEETTCCEEEEEECCTTC----CEEEEEETTEE-EEEECCSSCTTCCEEEEEESSCCGGGCEEEEEEEEE
T ss_pred CEEEeecCC-cCCCCCCEEEEEecCCCC----CEEEEEECCCc-ccccccccCCCcceeEEEeCcCCcccCeEEEEEecC
Confidence 456677776 899999999999997543 36899998543 3210 011 11 27999998621
Q ss_pred -----------------------------eEEEeCCcEEEEeeeCCccCCcceeEEEEeCCCeeeEEeeeecCCceEEEc
Q psy12724 75 -----------------------------EHVLKGNSAVLKCHIPSFVADYVAVESWISDQGEELFVDMTESTDGKYLVL 125 (167)
Q Consensus 75 -----------------------------~~v~~G~~a~l~C~~~~~~~~p~p~i~W~k~~~~~l~~~~~~~~~~r~~~~ 125 (167)
..+.+|++++|.|.+.+ +.+.+.|+||+ ..+.. .+....
T Consensus 79 ~~~~~~~s~~~~l~V~~~~~~p~i~~~p~~~v~~G~~v~L~C~~~~----~~~~~~w~k~g-~~~~~-------~~~~~~ 146 (188)
T 1oll_A 79 GELWSEPSNLLDLVVTEMYDTPTLSVHPGPEVISGEKVTFYCRLDT----ATSMFLLLKEG-RSSHV-------QRGYGK 146 (188)
T ss_dssp TTEECCCCCCEEEEEESCSCCCEEEEESCSEEETTCEEEEEEECSS----SCSEEEEEEES-SSCEE-------EEEECS
T ss_pred CCCCCCCCCceEEEecccCCCCeEEECCCCccccCCEEEEEEEcCC----CCCEEEEEECC-ccccc-------cccCCC
Confidence 23467999999999863 45689999997 34431 112223
Q ss_pred cCCeEEEeecCcCCCCcceEEEeeecC------cceEEEeee
Q psy12724 126 PSGELHIRDVGPEDGYKSYQCRTKHRL------TGETRLSAT 161 (167)
Q Consensus 126 ~~g~L~I~~v~~~D~~G~Y~C~a~n~~------~~~~~l~~~ 161 (167)
.++.|.|.+++.+|+ |.|+|.|.|.. +..+.|.++
T Consensus 147 ~~~~L~I~~v~~~d~-G~Y~C~a~n~~~~~s~~S~~~~l~V~ 187 (188)
T 1oll_A 147 VQAEFPLGPVTTAHR-GTYRCFGSYNNHAWSFPSEPVKLLVT 187 (188)
T ss_dssp SEEEEEEEECCGGGC-EEEEEECEEETTEECCCCCCEEEEEE
T ss_pred ceeEEEECCCCcCCC-cEEEEEEEcCCCcCCCCCCcEEEEec
Confidence 457899999999999 99999999863 334555553
No 32
>1ugn_A LIR1, leukocyte immunoglobulin-like receptor 1; immunoglobulin-like folds, immune system; 1.80A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 PDB: 3d2u_D* 1g0x_A 1p7q_D 1ufu_A 1vdg_A 2gw5_A 2dyp_D 2otp_A 3q2c_A
Probab=99.77 E-value=5.1e-18 Score=126.68 Aligned_cols=125 Identities=10% Similarity=0.038 Sum_probs=84.5
Q ss_pred eceeeEEeEEEEEeCCcEEEEeecCCCCCCcceeeEEeeCCCceeee--------cCCceE--------EEeeeEEEecC
Q psy12724 11 QYYEAQVYDVFVIKGNAAVFKCNLPSFVSDHLDVVSWADTDGGQYQI--------DNQDFV--------VSQSYTVNIMD 74 (167)
Q Consensus 11 ~~~~~~~~~~~v~~G~~~~l~C~a~~~~~~~~~~i~W~k~~~~~~~~--------~~~~~v--------~~g~y~c~~~~ 74 (167)
+.+...|. ..|.+|+++.|.|.+.+.+. .+.|+|++.. +.. .....+ .+|.|+|.+.+
T Consensus 6 P~i~~~p~-~~v~~G~~v~L~C~~~~~~~----~~~W~k~g~~-~~~~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~a~n 79 (198)
T 1ugn_A 6 PTLWAEPG-SVITQGSPVTLRCQGGQETQ----EYRLYREKKT-APWITRIPQELVKKGQFPIPSITWEHTGRYRCYYGS 79 (198)
T ss_dssp CEEEEESC-SEEETTCCEEEEEECCTTCC----CEEEEESSSC-CHHHHTSCHHHHTTTEEEESSCCGGGCEEEEEEEEE
T ss_pred CeEeccCC-CcccCCCcEEEEEEecCCCc----EEEEEECCcc-ccccccccccCCcccEEEECCCCHHHCeEEEEEEEC
Confidence 34666676 48899999999999988764 4999998653 311 011111 27999997621
Q ss_pred ------------------------------eEEEeCCcEEEEeeeCCccCCcceeEEEEeCCCeeeEEeeeecCCceEEE
Q psy12724 75 ------------------------------EHVLKGNSAVLKCHIPSFVADYVAVESWISDQGEELFVDMTESTDGKYLV 124 (167)
Q Consensus 75 ------------------------------~~v~~G~~a~l~C~~~~~~~~p~p~i~W~k~~~~~l~~~~~~~~~~r~~~ 124 (167)
..+.+|+++.|.|.+.+ . .|.++|+|++ ..+.+ ...++..
T Consensus 80 ~~~g~~~~s~~~~l~V~~~~~~p~i~~~~~~~v~~G~~v~L~C~~~~---~-~~~v~W~k~g-~~~~~-----~~~~~~~ 149 (198)
T 1ugn_A 80 DTAGRSESSDPLELVVTGAYIKPTLSAQPSPVVNSGGNVTLQCDSQV---A-FDGFILCKEG-EDEHP-----QCLNSQP 149 (198)
T ss_dssp TTTEECCCCCCEEEEEECSSCCCEEEEESCSEEETTCCEEEEEECSS---C-CSEEEEEEC------------CEEEC--
T ss_pred CCCCcccCCccEEEEEcccccCCccccCCccccCCCCcEEEEEecCC---C-CcEEEEEECC-CccCC-----ccccccc
Confidence 23568999999999974 3 5689999998 44432 1122222
Q ss_pred cc----CCeEEEeecCcCCCCcceEEEeeecC
Q psy12724 125 LP----SGELHIRDVGPEDGYKSYQCRTKHRL 152 (167)
Q Consensus 125 ~~----~g~L~I~~v~~~D~~G~Y~C~a~n~~ 152 (167)
.. ++.|.|.+++.+|+ |.|+|.|.|..
T Consensus 150 ~~~~~~~~~L~i~~v~~~D~-G~Y~C~a~n~~ 180 (198)
T 1ugn_A 150 HARGSSRAIFSVGPVSPSRR-WWYRCYAYDSN 180 (198)
T ss_dssp ----CCEEEEEECCCCTTSC-EEEEEEEECTT
T ss_pred cCCCcceeEEEecccCcccC-eEEEEEEEeCC
Confidence 22 36899999999999 99999999975
No 33
>3dmk_A DOWN syndrome cell adhesion molecule (dscam) ISOF 1.30.30, N-terminal eight IG domains...; immunoglobulin domain; HET: NAG NDG; 4.19A {Drosophila melanogaster}
Probab=99.77 E-value=2.8e-18 Score=152.11 Aligned_cols=145 Identities=50% Similarity=0.797 Sum_probs=105.6
Q ss_pred eceeeEEeEEE-EEeCCcEEEEeecCCCCCCcceeeEEeeCCCceeeec---------CCceE------------EEeee
Q psy12724 11 QYYEAQVYDVF-VIKGNAAVFKCNLPSFVSDHLDVVSWADTDGGQYQID---------NQDFV------------VSQSY 68 (167)
Q Consensus 11 ~~~~~~~~~~~-v~~G~~~~l~C~a~~~~~~~~~~i~W~k~~~~~~~~~---------~~~~v------------~~g~y 68 (167)
+.|..+|.+.. +..|+++.|.|.|.|.|. |.++|+|+||..+... +...+ ..|.|
T Consensus 39 P~~~~~p~~~~~~~~g~~~~l~C~a~g~p~---p~~~W~k~~g~~~~~~~~~~~~~~~g~l~i~~~~~~~~~~~~d~G~Y 115 (816)
T 3dmk_A 39 PVFLKEPTNRIDFSNSTGAEIECKASGNPM---PEIIWIRSDGTAVGDVPGLRQISSDGKLVFPPFRAEDYRQEVHAQVY 115 (816)
T ss_dssp EEEEECCCSEEEEETTTCEEEECEEEEESC---CEEEEEETTSCBCCCBTTTBEECSTTEEEECCCCGGGCCHHHHEEEE
T ss_pred CcEEeCCCCeEEEECCCCeEEEeeecCCCC---CEEEEEeCCCCCccCCCceEEEeeCCcEEEcCCChHHccccccceEE
Confidence 66888888754 667999999999998775 4799999666555321 11111 16999
Q ss_pred EEEecC--------------------------eEEEeCCcEEEEeeeCCccCCcceeEEEEeCCCeeeEEeeeecCCceE
Q psy12724 69 TVNIMD--------------------------EHVLKGNSAVLKCHIPSFVADYVAVESWISDQGEELFVDMTESTDGKY 122 (167)
Q Consensus 69 ~c~~~~--------------------------~~v~~G~~a~l~C~~~~~~~~p~p~i~W~k~~~~~l~~~~~~~~~~r~ 122 (167)
+|.+.+ ..+.+|++++|+|.+++..+.+.+.+.|+|++...+.+. ...++|+
T Consensus 116 ~C~a~n~~G~~~S~~~~v~~~~~~~~~~~~~~~~v~~G~~v~L~C~~~~~~~~~~~~v~W~~~~~~~~~~~--~~~~~r~ 193 (816)
T 3dmk_A 116 ACLARNQFGSIISRDVHVRAVVAQYYEADVNKEHVIRGNSAVIKCLIPSFVADFVEVVSWHTDEEENYFPG--AEYDGKY 193 (816)
T ss_dssp EEEEEETTEEEEEEEEEEEEECCCCCCCBCCCEEEETTSCEEECCBCCHHHHTTEEEEEEEETTSCEECBS--SCBTTTE
T ss_pred EEEEecCcceEEccceEEEEEEccccEEEEecceEecCceEEEEECCCccccccEEEEEEEecCceEeccc--cCCCceE
Confidence 998732 356789999999998754333347899999984332111 0136799
Q ss_pred EEccCCeEEEeecCcCCCCcceEEEeeecCcceEEEee
Q psy12724 123 LVLPSGELHIRDVGPEDGYKSYQCRTKHRLTGETRLSA 160 (167)
Q Consensus 123 ~~~~~g~L~I~~v~~~D~~G~Y~C~a~n~~~~~~~l~~ 160 (167)
.+.++|.|.|++++.+|++|.|+|.|.|..+++..++.
T Consensus 194 ~~~~~g~L~I~~v~~~D~~g~Y~C~~~~~~~~~~~~s~ 231 (816)
T 3dmk_A 194 LVLPSGELHIREVGPEDGYKSYQCRTKHRLTGETRLSA 231 (816)
T ss_dssp EECTTSCEEESSCCGGGSSCEEEEEEEETTTCCEEECS
T ss_pred EEecCceEEEecCChhhccceeEEEEeeeeeeeeeecc
Confidence 99999999999999999549999999987755544433
No 34
>2d3v_A Leukocyte immunoglobulin-like receptor subfamily A member 5 isoform 1; immunoglobulin-like fold, immune system; 1.85A {Homo sapiens}
Probab=99.77 E-value=2.9e-18 Score=128.00 Aligned_cols=126 Identities=11% Similarity=0.097 Sum_probs=81.4
Q ss_pred eceeeEEeEEEEEeCCcEEEEeecCCCCCCcceeeEEeeCCCceeee-c-----CCc-eE--------EEeeeEEEecC-
Q psy12724 11 QYYEAQVYDVFVIKGNAAVFKCNLPSFVSDHLDVVSWADTDGGQYQI-D-----NQD-FV--------VSQSYTVNIMD- 74 (167)
Q Consensus 11 ~~~~~~~~~~~v~~G~~~~l~C~a~~~~~~~~~~i~W~k~~~~~~~~-~-----~~~-~v--------~~g~y~c~~~~- 74 (167)
+.|...|. ..|.+|+++.|.|.+.+.+. .+.|+|++...... . ... .+ .+|.|+|.+.+
T Consensus 6 P~i~~~p~-~~v~~G~~v~L~C~~~~~~~----~~~W~k~g~~~~~~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~a~n~ 80 (196)
T 2d3v_A 6 ATLWAEPG-SVISRGNSVTIRCQGTLEAQ----EYRLVKEGSPEPWDTQNPLEPKNKARFSIPSMTEHHAGRYRCYYYSP 80 (196)
T ss_dssp CEEEEESC-SEEETTCCEEEEEECCTTCC----EEEEEETTCSSCSEEECCCSSTTEEEEEESSCCGGGCEEEEEEEEET
T ss_pred CEEEeCCC-CcccCCCeEEEEEeCCCCCc----EEEEEECCCCCCcccccccCCccccEEEeccCChhHCeEEEEEEeCC
Confidence 45677776 48899999999999987643 69999986533210 0 111 11 27999998621
Q ss_pred ----------------------------eEEEeCCcEEEEeeeCCccCCcceeEEEEeCCCeeeEEeeeecCCceEEEcc
Q psy12724 75 ----------------------------EHVLKGNSAVLKCHIPSFVADYVAVESWISDQGEELFVDMTESTDGKYLVLP 126 (167)
Q Consensus 75 ----------------------------~~v~~G~~a~l~C~~~~~~~~p~p~i~W~k~~~~~l~~~~~~~~~~r~~~~~ 126 (167)
..+.+|+++.|.|.+.+ .| |.++|+|++ ..+.+. ........
T Consensus 81 ~g~~~~s~~~~l~V~~~~~~p~i~~~~~~~v~~G~~v~L~C~~~~---~p-~~~~W~k~g-~~~~~~-----~~~~~~~~ 150 (196)
T 2d3v_A 81 AGWSEPSDPLELVVTGFYNKPTLSALPSPVVTSGENVTLQCGSRL---RF-DRFILTEEG-DHKLSW-----TLDSQLTP 150 (196)
T ss_dssp TEECBCCCCEEEEEECSSCCCEEEC-----------CEEEEEESS---CC-SEEEEEEC----CCEE-----EEECEECT
T ss_pred CCcCCcCccEEEEecCCCCCCeEEccCCccccCCCcEEEEEEcCC---CC-CEEEEEccC-Cccccc-----cccccccc
Confidence 13467999999999984 47 789999998 444221 01111222
Q ss_pred ----CCeEEEeecCcCCCCcceEEEeeecC
Q psy12724 127 ----SGELHIRDVGPEDGYKSYQCRTKHRL 152 (167)
Q Consensus 127 ----~g~L~I~~v~~~D~~G~Y~C~a~n~~ 152 (167)
.+.|.|.+++.+|+ |.|+|.|.|..
T Consensus 151 ~~~~~~~L~I~~v~~~D~-G~Y~C~a~n~~ 179 (196)
T 2d3v_A 151 SGQFQALFPVGPVTPSHR-WMLRCYGSRRH 179 (196)
T ss_dssp TSCEEEEEECCCCBTTBC-EEEEEEEEETT
T ss_pred CCCceeEEEeeecCcccC-eeEEEEEEccC
Confidence 26899999999999 99999999975
No 35
>4f80_A Butyrophilin subfamily 3 member A1; B7 superfamily, CD277, immune system; 1.94A {Homo sapiens} PDB: 4f9l_A* 4f9p_A 4f8t_A 4f8q_A
Probab=99.76 E-value=4.9e-18 Score=129.07 Aligned_cols=133 Identities=16% Similarity=0.216 Sum_probs=85.8
Q ss_pred ceee-EEe-EEEEEeCCcEEEEeecCCCCCCcceeeEEeeCCCceee---ecC------------Cc-------------
Q psy12724 12 YYEA-QVY-DVFVIKGNAAVFKCNLPSFVSDHLDVVSWADTDGGQYQ---IDN------------QD------------- 61 (167)
Q Consensus 12 ~~~~-~~~-~~~v~~G~~~~l~C~a~~~~~~~~~~i~W~k~~~~~~~---~~~------------~~------------- 61 (167)
+|++ .|. .+.|.+|+++.|.|.+.+.+.+....|.|+|++..... .++ .|
T Consensus 4 Qf~V~~P~~pV~v~~G~~v~L~C~v~~~~~~~~~~V~W~k~~~~~~v~~~~~g~~~~~~~~~~~~~r~~~~~~~~~~~~~ 83 (226)
T 4f80_A 4 QFSVLGPSGPILAMVGEDADLPCHLFPTMSAETMELKWVSSSLRQVVNVYADGKEVEDRQSAPYRGRTSILRDGITAGKA 83 (226)
T ss_dssp CCEEECCSSCEEEETTSCEEEEEEEESCCCCTTSEEEEEETTTCCEEEEEETTEECGGGSCTTTTTTEEEECTTGGGTEE
T ss_pred eEEEECCCCCEEEEcCCcEEEEEEEECCCCCCceEEEEEECCCCceEEEEeCCeEcccccCccccceEEEecccccCCeE
Confidence 4554 243 47899999999999987655432236999998643210 110 00
Q ss_pred eE--------EEeeeEEEecC-----------------------eEEEeCCcEEEEeeeCCccCCcceeEEEEeCCCeee
Q psy12724 62 FV--------VSQSYTVNIMD-----------------------EHVLKGNSAVLKCHIPSFVADYVAVESWISDQGEEL 110 (167)
Q Consensus 62 ~v--------~~g~y~c~~~~-----------------------~~v~~G~~a~l~C~~~~~~~~p~p~i~W~k~~~~~l 110 (167)
.+ .+|.|+|.+.+ ..+.+|+.+.|.|.+.+ +.|.|.|+|+|+++..+
T Consensus 84 ~L~I~~v~~~D~G~Y~C~a~n~~~~~~~~v~~~~~~~~~~~~~~~~~~~g~~v~l~c~~~g--~~P~p~i~W~k~~~~~~ 161 (226)
T 4f80_A 84 ALRIHNVTASDSGKYLCYFQDGDFYEKALVELKVAALGSDLHVDVKGYKDGGIHLECRSTG--WYPQPQIQWSNNKGENI 161 (226)
T ss_dssp EEEESSCCGGGCEEEEEEEEETTEEEEEEEEEEEEBCCCCCEEEEEEEETTEEEEEEEEEE--EBSCCEEEEECTTSCBC
T ss_pred EEEEeeCchHHCeeEEEEEECCCcEEEEEEEEeeccceecccceeeeccCCceeeEEEecc--CCCCCEEEEEECCceEc
Confidence 11 27999998743 34578999999999974 24899999999875444
Q ss_pred EEeeeecCCceEEEccCCe---EEEeecCcCCCCcceEEEeeecC
Q psy12724 111 FVDMTESTDGKYLVLPSGE---LHIRDVGPEDGYKSYQCRTKHRL 152 (167)
Q Consensus 111 ~~~~~~~~~~r~~~~~~g~---L~I~~v~~~D~~G~Y~C~a~n~~ 152 (167)
.. ...+.....+|. +.|.+++.+|+ |.|+|.|+|.+
T Consensus 162 ~~-----~~~~~~~~~~g~~~v~s~l~v~~~d~-G~YtC~a~N~~ 200 (226)
T 4f80_A 162 PT-----VEAPVVADGVGLYAVAASVIMRGSSG-EGVSCTIRSSL 200 (226)
T ss_dssp CC-----EECCCEECTTSCEEEEEEEEECC-----CEEEEEEETT
T ss_pred CC-----CceEEEECCCCcEEEEEEEEechhcC-cEEEEEEEeCC
Confidence 21 122333444554 34557899998 99999999987
No 36
>3k0w_A Mucosa-associated lymphoid tissue lymphoma translocation protein 1, isoform 2; hydrolase, immunoglobulin domain, nucleus, protease; 2.80A {Homo sapiens}
Probab=99.76 E-value=8.2e-18 Score=127.51 Aligned_cols=130 Identities=12% Similarity=0.207 Sum_probs=96.5
Q ss_pred eceeeEEeEEEEEeCCcEEEEeecCCCCCCcceeeEEeeCCCceeeecCCceE--------EEeeeEEEecC--------
Q psy12724 11 QYYEAQVYDVFVIKGNAAVFKCNLPSFVSDHLDVVSWADTDGGQYQIDNQDFV--------VSQSYTVNIMD-------- 74 (167)
Q Consensus 11 ~~~~~~~~~~~v~~G~~~~l~C~a~~~~~~~~~~i~W~k~~~~~~~~~~~~~v--------~~g~y~c~~~~-------- 74 (167)
.+|...|.+..+.+|+++.|.|.+.+.+. +.+.|+|++. .+.......+ ..|.|+|.+.+
T Consensus 19 ~~i~~~p~~~~v~~G~~v~L~C~~~~~p~---~~v~W~~~~~-~~~~~~~~~L~i~~v~~~d~G~Y~C~~~n~~~~~~s~ 94 (218)
T 3k0w_A 19 SKITVNPESKAVLAGQFVKLCCRATGHPF---VQYQWFKMNK-EIPNGNTSELIFNAVHVKDAGFYVCRVNNNFTFEFSQ 94 (218)
T ss_dssp CCEEECCCCEEEETTSBEEEECEETTTTS---SEEEEEETTE-ECTTCCSSEEEETTCCGGGCEEEEEEEECTTCCEECC
T ss_pred CEEEECCCCeEEeCCCcEEEEeeecCCCC---CEEEEEECCE-ECCCCCCCEEEEccCChhhCeEeEEEEEcCCCCceee
Confidence 35788899999999999999999988764 4799999854 3322111111 27899997632
Q ss_pred ---------------------------------eEEEeCCcEEEEeeeCCccCCcceeEEEEeCCCeeeEEeeeecCCce
Q psy12724 75 ---------------------------------EHVLKGNSAVLKCHIPSFVADYVAVESWISDQGEELFVDMTESTDGK 121 (167)
Q Consensus 75 ---------------------------------~~v~~G~~a~l~C~~~~~~~~p~p~i~W~k~~~~~l~~~~~~~~~~r 121 (167)
..+.+|+++.|.|.+. +.|.|.++|+|++ ..+. ..
T Consensus 95 ~~~l~V~~~~~~~~~~~~~~~~~~p~~~~~~~~~~v~~G~~v~L~C~~~---g~p~~~v~W~~~~-~~~~------~~-- 162 (218)
T 3k0w_A 95 WSQLDVCDIPESFQRSVDGVSESKLQICVEPTSQKLMPGSTLVLQCVAV---GSPIPHYQWFKNE-LPLT------HE-- 162 (218)
T ss_dssp CEEEEEECCCGGGCTTCCSBCCSSCEEEECCCCEEECTTCCEEEECEEE---BSSCCEEEEEETT-EECT------TC--
T ss_pred EEEEEEEccCcccccccccccCCCceEEECCCceeecCCCcEEEEEEec---ccCCCeEEEEECC-EECC------CC--
Confidence 2345799999999996 4589999999997 4442 11
Q ss_pred EEEccCCeEEEeecCcCCCCcceEEEeeecC----cceEEEeee
Q psy12724 122 YLVLPSGELHIRDVGPEDGYKSYQCRTKHRL----TGETRLSAT 161 (167)
Q Consensus 122 ~~~~~~g~L~I~~v~~~D~~G~Y~C~a~n~~----~~~~~l~~~ 161 (167)
.++.|.|.+++.+|+ |.|+|.|.|.. +..+.|.+.
T Consensus 163 ----~~~~L~i~~v~~~d~-G~Y~C~a~n~~g~~~s~~~~l~V~ 201 (218)
T 3k0w_A 163 ----TKKLYMVPYVDLEHQ-GTYWCHVYNDRDSQDSKKVEIIID 201 (218)
T ss_dssp ----CSSEEEESSCCGGGC-EEEEEEEECSSCEEECCCEEEEEC
T ss_pred ----CCCEEEEeecChhcC-EEEEEEEEcCCCCceeeeEEEEEe
Confidence 246899999999998 99999999965 334455553
No 37
>2va4_A NCAM2, N-CAM 2, neural cell adhesion molecule 2; transmembrane, phosphorylation, immunoglobulin domain, membrane, glycoprotein; HET: NAG; 1.9A {Homo sapiens} PDB: 2xy1_A*
Probab=99.76 E-value=6.3e-18 Score=124.15 Aligned_cols=128 Identities=19% Similarity=0.361 Sum_probs=90.9
Q ss_pred EEeEEEEEeCCcEEEEeecCCCCCCcceeeEEeeCCCceeeecC-------CceE--------EEeeeEEEecC------
Q psy12724 16 QVYDVFVIKGNAAVFKCNLPSFVSDHLDVVSWADTDGGQYQIDN-------QDFV--------VSQSYTVNIMD------ 74 (167)
Q Consensus 16 ~~~~~~v~~G~~~~l~C~a~~~~~~~~~~i~W~k~~~~~~~~~~-------~~~v--------~~g~y~c~~~~------ 74 (167)
.+.+..+.+|+++.|.|.+.+.+. +.+.|+|++. .+..+. ...+ ..|.|+|.+.+
T Consensus 10 ~~~~~~v~~G~~v~l~C~~~~~p~---~~v~W~~~~~-~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~~~~~~~~~~ 85 (192)
T 2va4_A 10 KSFNATAERGEEMTFSCRASGSPE---PAISWFRNGK-LIEENEKYILKGSNTELTVRNIINSDGGPYVCRATNKAGEDE 85 (192)
T ss_dssp CEEEEETTSCCCEEEECEEECSSC---CEEEEEETTE-ECCCSSSEEEETTTTEEEECSCCGGGCEEEEEEEEETTEEEE
T ss_pred CCcEEEEecCCCEEEEEeeccCCC---CeEEEEECCe-EcCCCccEEEeCCeeEEEEecCChhcCcEEEEEEEccccccc
Confidence 566788999999999999988765 4799999853 332211 1111 26999998732
Q ss_pred ------------------eEEEeCCcEEEEeeeCCccCCcceeEEEEeCCC-eeeEEeeeecCCceEEEcc---CCeEEE
Q psy12724 75 ------------------EHVLKGNSAVLKCHIPSFVADYVAVESWISDQG-EELFVDMTESTDGKYLVLP---SGELHI 132 (167)
Q Consensus 75 ------------------~~v~~G~~a~l~C~~~~~~~~p~p~i~W~k~~~-~~l~~~~~~~~~~r~~~~~---~g~L~I 132 (167)
..+.+|+++.|.|.+.+ .|.|.++|+|++. ..+... .....+++.+.. ++.|.|
T Consensus 86 ~~~~l~V~~~p~~~~~~~~~~~~g~~v~l~C~~~~---~p~~~v~W~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~L~i 161 (192)
T 2va4_A 86 KQAFLQVFVQPHIIQLKNETTYENGQVTLVCDAEG---EPIPEITWKRAVDGFTFTEG-DKSLDGRIEVKGQHGSSSLHI 161 (192)
T ss_dssp EEEEEEEEEEEEEEEECCEEECTTSEEEEEEEEEE---ESCCEEEEEETTTTEEECTT-CBCTTSCEEEEEETTEEEEEE
T ss_pred eEEEEEEEccCcccccCcceEEeCCeEEEEEEecC---CCCCcEEEEeCCCCceeecc-ccccCCcEEEeeccCceEEEE
Confidence 23457999999999974 4888999999842 222110 001235565543 357999
Q ss_pred eecCcCCCCcceEEEeeecC
Q psy12724 133 RDVGPEDGYKSYQCRTKHRL 152 (167)
Q Consensus 133 ~~v~~~D~~G~Y~C~a~n~~ 152 (167)
.+++.+|+ |.|+|.|.|..
T Consensus 162 ~~~~~~d~-G~Y~C~a~n~~ 180 (192)
T 2va4_A 162 KDVKLSDS-GRYDCEAASRI 180 (192)
T ss_dssp ESCCGGGC-EEEEEEEECSS
T ss_pred ecCCcccC-EEEEEEEEecC
Confidence 99999998 99999999987
No 38
>4frw_A Poliovirus receptor-related protein 4; immunoglobulin-like domain, IG domain, viral entry receptor, adhesion; 3.50A {Homo sapiens}
Probab=99.76 E-value=5.6e-18 Score=125.72 Aligned_cols=130 Identities=15% Similarity=0.215 Sum_probs=89.9
Q ss_pred EEeEEEEEeCCcEEEEeecCCCCCCcceeeEEeeCCCceeee-------c---------CCc-------------eE---
Q psy12724 16 QVYDVFVIKGNAAVFKCNLPSFVSDHLDVVSWADTDGGQYQI-------D---------NQD-------------FV--- 63 (167)
Q Consensus 16 ~~~~~~v~~G~~~~l~C~a~~~~~~~~~~i~W~k~~~~~~~~-------~---------~~~-------------~v--- 63 (167)
.++++.|.+|+++.|.|.+.+.+.+.++.|.|+|++...... + ..| .+
T Consensus 5 ~p~~vtv~~G~~v~L~C~v~~~~~~~~~~V~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~sL~I~ 84 (218)
T 4frw_A 5 TSDVVTVVLGQDAKLPCFYRGDSGEQVGQVAWARVDAGEGAQELALLHSKYGLHVSPAYEGRVEQPPPPRNPLDGSVLLR 84 (218)
T ss_dssp CCSEEEEETTSCEEECCEECCCTTCEEEEEEEEEECSSSCEEEEEEEETTTEEEECGGGTTTEECCSSCCCTTBCCEEES
T ss_pred CCCeEEEEcCCCEEEEEEEEcCCCCCccEEEEEECCCCCCceeEEEecCCCCeEeCccccceEEEecccccCCeEEEEEe
Confidence 456789999999999999998887656679999975421100 0 000 01
Q ss_pred -----EEeeeEEEecC---------------------------eEEEeCCcEEEEeeeCCccCCcceeEEEEeCCCeeeE
Q psy12724 64 -----VSQSYTVNIMD---------------------------EHVLKGNSAVLKCHIPSFVADYVAVESWISDQGEELF 111 (167)
Q Consensus 64 -----~~g~y~c~~~~---------------------------~~v~~G~~a~l~C~~~~~~~~p~p~i~W~k~~~~~l~ 111 (167)
.+|.|.|.+.+ ..+..|+.+.|.|.+.+ .|.|.|+|+|++ ..+.
T Consensus 85 ~v~~~D~G~Y~C~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~~~g---~p~p~i~W~~~~-~~~~ 160 (218)
T 4frw_A 85 NAVQADEGEYECRVSTFPAGSFQARLRLRVLVPPLPSLNPGPALEEGQGLTLAASCTAEG---SPAPSVTWDTEV-KGTT 160 (218)
T ss_dssp SCCGGGCEEEEEEEEEETTEEEEEEEEEEEEBCCCCEEEECSCEETTCCSEEEEEEEEEE---BSCCEEEEEESS-CCEE
T ss_pred eccHHHCCceeEEEEeccCceeeeEEEEEEeeeccceeeeeeeeeeeeccccceeeeccC---CcCceEEEEECC-cccc
Confidence 17999997632 12246889999999974 588999999997 4553
Q ss_pred EeeeecCCceEEEccCCeEEEeecCcCCCCcceEEEeeecC
Q psy12724 112 VDMTESTDGKYLVLPSGELHIRDVGPEDGYKSYQCRTKHRL 152 (167)
Q Consensus 112 ~~~~~~~~~r~~~~~~g~L~I~~v~~~D~~G~Y~C~a~n~~ 152 (167)
........+.+. ..+.|.|.+++.+|+ |.|+|.|.|..
T Consensus 161 ~~~~~~~~~~~~--~~s~L~i~~~~~~d~-g~YtC~a~N~~ 198 (218)
T 4frw_A 161 SSRSFKHSRSAA--VTSEFHLVPSRSMNG-QPLTCVVSHPG 198 (218)
T ss_dssp EEEEEECSSSEE--EEEEEEECCCGGGTT-CEEEEEEECTT
T ss_pred cCceEecCCcEE--EEEEEEEeeCCHHhC-eEEEEEEEeCC
Confidence 221000111111 124699999999998 99999999987
No 39
>3p2t_A Leukocyte immunoglobulin-like receptor subfamily 4; LILR, IG, inhibitory receptor, disulfide, immune system; 1.70A {Homo sapiens}
Probab=99.76 E-value=2.1e-18 Score=128.62 Aligned_cols=126 Identities=13% Similarity=0.093 Sum_probs=88.0
Q ss_pred eceeeEEeEEEEEeCCcEEEEeecCCCCCCcceeeEEeeCCCceeeec------CCc-eE--------EEeeeEEEecC-
Q psy12724 11 QYYEAQVYDVFVIKGNAAVFKCNLPSFVSDHLDVVSWADTDGGQYQID------NQD-FV--------VSQSYTVNIMD- 74 (167)
Q Consensus 11 ~~~~~~~~~~~v~~G~~~~l~C~a~~~~~~~~~~i~W~k~~~~~~~~~------~~~-~v--------~~g~y~c~~~~- 74 (167)
+.+...|.. .|.+|+++.|.|.+.+. . +.+.|+|++....... ... .+ .+|.|+|.+.+
T Consensus 6 P~i~~~p~~-~v~~G~~v~L~C~~~~~-~---~~~~w~k~g~~~~~~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~a~n~ 80 (196)
T 3p2t_A 6 PTLWAEPGS-VISWGNSVTIWCQGTLE-A---REYRLDKEESPAPWDRQNPLEPKNKARFSIPSMTEDYAGRYRCYYRSP 80 (196)
T ss_dssp CEEEEESCS-EEETTCCEEEEEECCTT-C---CEEEEEETTSCSCSEEECCCSSSSEEEEEESSCCGGGCEEEEEEEEET
T ss_pred CEEEccCCC-cCCCCCcEEEEeeCCCC-C---CEEEEEECCCCCcccccccccCCceEEEEeccCCcccCceEEEEEeCC
Confidence 446677776 89999999999999883 2 4699999865332110 111 11 27999997522
Q ss_pred ----------------------------eEEEeCCcEEEEeeeCCccCCcceeEEEEeCCCeeeEEeeeecCCceE---E
Q psy12724 75 ----------------------------EHVLKGNSAVLKCHIPSFVADYVAVESWISDQGEELFVDMTESTDGKY---L 123 (167)
Q Consensus 75 ----------------------------~~v~~G~~a~l~C~~~~~~~~p~p~i~W~k~~~~~l~~~~~~~~~~r~---~ 123 (167)
..+.+|++++|.|.+.+ +.+.+.|+|++. .+.. ...+. .
T Consensus 81 ~g~~~~s~~~~l~V~~~~~~p~~~~~~~~~v~~G~~v~L~C~~~~----~~~~~~w~k~g~-~~~~-----~~~~~~~~~ 150 (196)
T 3p2t_A 81 VGWSQPSDPLELVMTGAYSKPTLSALPSPLVTSGKSVTLLCQSRS----PMDTFLLCKERA-AHPL-----LCLRSEHGA 150 (196)
T ss_dssp TEEBCCCCCEEEEEECSSCCCEEEEESCSEECTTCCEEEEEEEEE----EEEEEEEEETTC-CCGG-----GSEEEEEEE
T ss_pred CcccCCCccEEEEecCCCCCCEEEeCCcceecCCCeEEEEEecCC----CCCEEEEEeCCC-cccc-----eeecccccc
Confidence 13457999999999863 456789999973 3321 11111 1
Q ss_pred EccCCeEEEeecCcCCCCcceEEEeeecC
Q psy12724 124 VLPSGELHIRDVGPEDGYKSYQCRTKHRL 152 (167)
Q Consensus 124 ~~~~g~L~I~~v~~~D~~G~Y~C~a~n~~ 152 (167)
...++.|.|.+++.+|+ |.|+|.|.|..
T Consensus 151 ~~~~~~L~i~~v~~~d~-G~Y~C~a~n~~ 178 (196)
T 3p2t_A 151 QQHQAEFPMSPVTSVHG-GTYRCFSSHGF 178 (196)
T ss_dssp EEEEEEEEECSCCGGGC-EEEEEEEECGG
T ss_pred cCcceEEEeCCCcccCC-CeEEEEEEcCC
Confidence 22457899999999999 99999999986
No 40
>3r4d_A CEA-related cell adhesion molecule 1, isoform 1/2; immunoglobulin, beta-sandwich, mceacam1A - immunoglobulin FO spike NTD - galectin-like beta-sandwich fold; HET: NAG; 3.10A {Mus musculus} PDB: 1l6z_A*
Probab=99.76 E-value=1.6e-17 Score=123.88 Aligned_cols=125 Identities=17% Similarity=0.240 Sum_probs=91.3
Q ss_pred eeeEEeEEEEEeCCcEEEEeecCCCCCCcceeeEEeeCCCce----ee----------------------ecCCceE---
Q psy12724 13 YEAQVYDVFVIKGNAAVFKCNLPSFVSDHLDVVSWADTDGGQ----YQ----------------------IDNQDFV--- 63 (167)
Q Consensus 13 ~~~~~~~~~v~~G~~~~l~C~a~~~~~~~~~~i~W~k~~~~~----~~----------------------~~~~~~v--- 63 (167)
+++.+....+.+|+++.|.|.+.+.+. +.+.|+|++... +. .++...+
T Consensus 2 ~~i~~~~~~v~~G~~v~L~C~~~~~~~---~~v~W~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~r~~~~~~~~L~i~~v 78 (208)
T 3r4d_A 2 VTIEAVPPQVAEDNNVLLLVHNLPLAL---GAFAWYKGNTTAIDKEIARFVPNSNMNFTGQAYSGREIIYSNGSLLFQMI 78 (208)
T ss_dssp CEEEEESSEEETTCCEEEEEECCCSSC---SEEEEEESSCCCGGGEEEEEEGGGTEEEECTTCCSSEEECTTSCEEECSC
T ss_pred ccccCccceeecCCcEEEEEeCCCCCc---eEEEeccCCCCCccceEEEEecCCCccccCccccceeEEecCCeEEEccc
Confidence 566777889999999999999766654 479999874310 10 0011111
Q ss_pred ---EEeeeEEEecCe---------------------------EEEeCCcEEEEeeeCCccCCcceeEEEEeCCCeeeEEe
Q psy12724 64 ---VSQSYTVNIMDE---------------------------HVLKGNSAVLKCHIPSFVADYVAVESWISDQGEELFVD 113 (167)
Q Consensus 64 ---~~g~y~c~~~~~---------------------------~v~~G~~a~l~C~~~~~~~~p~p~i~W~k~~~~~l~~~ 113 (167)
.+|.|+|.+.+. .+.+|+++.|.|.+.+ .| |.++|+|++ ..+.
T Consensus 79 ~~~D~G~Y~C~~~~~~~~~~~~~~~l~V~~~~~~p~i~~~~~~~~~g~~v~l~C~~~~---~p-p~i~W~~~g-~~l~-- 151 (208)
T 3r4d_A 79 TMKDMGVYTLDMTDENYRRTQATVRFHVHQPVTQPFLQVTNTTVKELDSVTLTCLSND---IG-ANIQWLFNS-QSLQ-- 151 (208)
T ss_dssp CGGGCEEEEEEEECSSCEEEEEEEEEEEECCCCCCEEEESCSSCCTTCCEEEEEECSC---TT-CEEEEEETT-EECC--
T ss_pred cccCCeEEEEEEEcccCceeEEEEEEEeccCCCCCEEecCCceEeeCCCEEEEEECCC---CC-CceEEEECC-EeCC--
Confidence 279999987431 1346999999999974 35 789999987 4553
Q ss_pred eeecCCceEEEccC-CeEEEeecCcCCCCcceEEEeeecC
Q psy12724 114 MTESTDGKYLVLPS-GELHIRDVGPEDGYKSYQCRTKHRL 152 (167)
Q Consensus 114 ~~~~~~~r~~~~~~-g~L~I~~v~~~D~~G~Y~C~a~n~~ 152 (167)
.+.++.+..+ +.|.|.+++.+|+ |.|+|.|.|..
T Consensus 152 ----~~~~~~~~~~~~~L~i~~v~~~d~-G~Y~C~a~N~~ 186 (208)
T 3r4d_A 152 ----LTERMTLSQNNSILRIDPIKREDA-GEYQCEISNPV 186 (208)
T ss_dssp ----CCSSEEEETTTTEEEESSCCGGGC-EEEEEEEECTT
T ss_pred ----CCCCeEEcCCCCEEEEeccCHHhC-eEEEEEEecCC
Confidence 3456666554 7899999999998 99999999987
No 41
>2rik_A Titin; I-SET IG fold, poly-IG linear array, structural protein; 1.60A {Oryctolagus cuniculus} PDB: 2rjm_A
Probab=99.76 E-value=1.4e-17 Score=129.63 Aligned_cols=130 Identities=16% Similarity=0.350 Sum_probs=97.1
Q ss_pred EeeeceeeEEeEEEEEeCCcEEEEeecCCCCCCcceeeEEeeCCCceeeecCC---------ceE--------EEeeeEE
Q psy12724 8 VISQYYEAQVYDVFVIKGNAAVFKCNLPSFVSDHLDVVSWADTDGGQYQIDNQ---------DFV--------VSQSYTV 70 (167)
Q Consensus 8 v~~~~~~~~~~~~~v~~G~~~~l~C~a~~~~~~~~~~i~W~k~~~~~~~~~~~---------~~v--------~~g~y~c 70 (167)
...+.|...|.+..+.+|+++.|.|.+.+.+. +.+.|+|++. .+..... ..+ ..|.|+|
T Consensus 3 ~~pP~~~~~p~~~~~~~G~~v~l~C~~~g~p~---~~v~W~~~~~-~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C 78 (284)
T 2rik_A 3 MAPPFFDLKPVSVDLALGESGTFKCHVTGTAP---IKITWAKDNR-EIRPGGNYKMTLVENTATLTVLKVTKGDAGQYTC 78 (284)
T ss_dssp CCCCEEEECCCCEEEETTCCEEEEEEEESSSC---CEEEEEETTE-ECCSSSSEEEEEETTEEEEEESSCCGGGCEEEEE
T ss_pred cCCCEEEccccceEecCCCcEEEEEEEEcCCC---CEEEEEECCE-ECcCCCcEEEEEcCCEEEEEEecCCcccCEEEEE
Confidence 34567888999999999999999999998764 4799999854 3322111 111 2699999
Q ss_pred EecC--------------------------eEEEeCCcEEEEeeeCCccCCcceeEEEEeCCCeeeEEeeeecCCceEEE
Q psy12724 71 NIMD--------------------------EHVLKGNSAVLKCHIPSFVADYVAVESWISDQGEELFVDMTESTDGKYLV 124 (167)
Q Consensus 71 ~~~~--------------------------~~v~~G~~a~l~C~~~~~~~~p~p~i~W~k~~~~~l~~~~~~~~~~r~~~ 124 (167)
.+.+ ..+.+|+++.|.|.+.+ .|.|.++|+|++ ..+. ...++.+
T Consensus 79 ~~~n~~g~~~~~~~l~V~~~p~~~~~~~~~~~v~~g~~~~l~C~~~g---~p~~~v~W~~~~-~~~~------~~~~~~~ 148 (284)
T 2rik_A 79 YASNVAGKDSCSAQLGVQEPPRFIKKLEPSRIVKQDEHTRYECKIGG---SPEIKVLWYKDE-TEIQ------ESSKFRM 148 (284)
T ss_dssp EEEETTEEEEEEEEEEEECCCEEEECCCSEEEEETTCCEEEEEEEES---SSCCEEEEEETT-EECC------CSSSEEE
T ss_pred EEEECCceEEEEEEEEccCCCcccccCCCceEecCCceEEEEEEEee---eCCCEEEEEECC-EECc------CCCcEEE
Confidence 8732 23568999999999974 588999999997 4553 2233332
Q ss_pred c---cCCeEEEeecCcCCCCcceEEEeeecC
Q psy12724 125 L---PSGELHIRDVGPEDGYKSYQCRTKHRL 152 (167)
Q Consensus 125 ~---~~g~L~I~~v~~~D~~G~Y~C~a~n~~ 152 (167)
. .++.|.|.+++.+|+ |.|+|.|.|..
T Consensus 149 ~~~~~~~~L~i~~~~~~d~-G~Y~C~a~n~~ 178 (284)
T 2rik_A 149 SFVESVAVLEMYNLSVEDS-GDYTCEAHNAA 178 (284)
T ss_dssp EEETTEEEEEECSCCGGGC-EEEEEEEECSS
T ss_pred EEcCCEEEEEECCCCcccC-EEEEEEEEcCC
Confidence 2 235799999999999 99999999986
No 42
>3laf_A Deleted in colorectal cancer; netrin-1 receptor, immunoglobulin superfamily, horseshoe, AP; HET: NAG BMA; 2.40A {Rattus norvegicus}
Probab=99.76 E-value=5.4e-18 Score=137.91 Aligned_cols=133 Identities=17% Similarity=0.357 Sum_probs=99.5
Q ss_pred eeeEEeEEEEEeCCcEEEEeecCCCCCCcceeeEEeeCCCceeeecCCc-------eE--------EEeeeEEEecC---
Q psy12724 13 YEAQVYDVFVIKGNAAVFKCNLPSFVSDHLDVVSWADTDGGQYQIDNQD-------FV--------VSQSYTVNIMD--- 74 (167)
Q Consensus 13 ~~~~~~~~~v~~G~~~~l~C~a~~~~~~~~~~i~W~k~~~~~~~~~~~~-------~v--------~~g~y~c~~~~--- 74 (167)
+...+.+..+.+|+++.|.|.+.+.|.+ .+.|+|++. .+.....+ .+ ..|.|+|.+.+
T Consensus 224 ~~~~~~~~~~~~g~~~~l~C~~~~~p~~---~~~W~~~~~-~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~n~~g 299 (403)
T 3laf_A 224 FLQRPSNVIAIEGKDAVLECCVSGYPPP---SFTWLRGEE-VIQLRSKKYSLLGGSNLLISNVTDDDSGTYTCVVTYKNE 299 (403)
T ss_dssp EEECCCCEEEETTSCEEECCEEEEESCC---EEEEEETTE-ECCCSSSSEEEETTTEEEECSCCGGGCEEEEEEEEETTE
T ss_pred EecCCCceEecCCCcEEEEEEcCCCCCC---eEEEEECCe-eccCCCceEEECCccEEEEeCCCHHHCEEEEEEEEcCCC
Confidence 4455667889999999999999987754 799999854 33221111 11 26999998743
Q ss_pred ----------------------eEEEeCCcEEEEeeeCCccCCcceeEEEEeCCCeeeEEeeeecCCceEEEccCCeEEE
Q psy12724 75 ----------------------EHVLKGNSAVLKCHIPSFVADYVAVESWISDQGEELFVDMTESTDGKYLVLPSGELHI 132 (167)
Q Consensus 75 ----------------------~~v~~G~~a~l~C~~~~~~~~p~p~i~W~k~~~~~l~~~~~~~~~~r~~~~~~g~L~I 132 (167)
..+.+|+++.|.|.+.+ .|.|.++|+|++ ..+. ...++.+..++.|.|
T Consensus 300 ~~~~~~~l~V~~~p~~~~~~~~~~~~~g~~v~l~C~~~g---~p~p~v~W~~~g-~~~~------~~~~~~~~~~~~L~i 369 (403)
T 3laf_A 300 NISASAELTVLVPPWFLNHPSNLYAYESMDIEFECAVSG---KPVPTVNWMKNG-DVVI------PSDYFQIVGGSNLRI 369 (403)
T ss_dssp EEEEEEEEEEEEEEEEEECCCCEECCTTCCEEECCEEEE---ESCCEEEEEETT-EECC------CSSSEEEETTTEEEE
T ss_pred ceEEEEEEEEECCCcEeecCcceEEecCCeEEEEEEEee---ccCCEEEEEECC-EECC------CCCcEEEecCccEEE
Confidence 23457999999999974 588999999998 4553 355677777889999
Q ss_pred eecCcCCCCcceEEEeeecC---cceEEEee
Q psy12724 133 RDVGPEDGYKSYQCRTKHRL---TGETRLSA 160 (167)
Q Consensus 133 ~~v~~~D~~G~Y~C~a~n~~---~~~~~l~~ 160 (167)
.+++.+|+ |.|+|.|.|.. ...+.|.+
T Consensus 370 ~~v~~~d~-G~Y~C~a~N~~G~~~~~~~l~V 399 (403)
T 3laf_A 370 LGVVKSDE-GFYQCVAENEAGNAQSSAQLIV 399 (403)
T ss_dssp SSCCGGGC-EEEEEEEEETTEEEEEEEEEEC
T ss_pred eccccccC-EEEEEEEEcCCceEEEEEEEEE
Confidence 99999998 99999999987 33445544
No 43
>2yd9_A Receptor-type tyrosine-protein phosphatase S; hydrolase; HET: NAG B3P; 2.60A {Homo sapiens}
Probab=99.76 E-value=5e-18 Score=134.01 Aligned_cols=132 Identities=17% Similarity=0.277 Sum_probs=96.7
Q ss_pred eeeceeeEEeEEEEEeCCcEEEEeecCCCCCCcceeeEEeeCCCceeee---------cCCce-E---------EEeeeE
Q psy12724 9 ISQYYEAQVYDVFVIKGNAAVFKCNLPSFVSDHLDVVSWADTDGGQYQI---------DNQDF-V---------VSQSYT 69 (167)
Q Consensus 9 ~~~~~~~~~~~~~v~~G~~~~l~C~a~~~~~~~~~~i~W~k~~~~~~~~---------~~~~~-v---------~~g~y~ 69 (167)
..+.|...+.+..+.+|+++.|.|.+.+.|. +.+.|+|++.. +.. ++... + ..|.|+
T Consensus 5 ~~P~~~~~p~~~~v~~G~~v~l~C~~~g~p~---~~i~W~k~g~~-i~~~~~~~~~~~~~~~~~L~i~~~~~~~D~G~Y~ 80 (304)
T 2yd9_A 5 EPPRFIKEPKDQIGVSGGVASFVCQATGDPK---PRVTWNKKGKK-VNSQRFETIEFDESAGAVLRIQPLRTPRDENVYE 80 (304)
T ss_dssp CCCEEEECCCCEEEETTSCEEEEEEEECSSC---CEEEEC--------CTTEEEEEETTTTEEEEEECSCCTTTTCSEEE
T ss_pred cCCeeeecCCceEecCCCeEEEEEEEEEeCC---CeEEEEECCEE-CCCCceEEEEecCCCceEEEEecccccCCCeEEE
Confidence 3466888999999999999999999988765 47999998643 211 11101 1 268999
Q ss_pred EEecC--------------------------------eEEEeCCcEEEEeeeCCccCCcceeEEEEeCCCeeeEEeeeec
Q psy12724 70 VNIMD--------------------------------EHVLKGNSAVLKCHIPSFVADYVAVESWISDQGEELFVDMTES 117 (167)
Q Consensus 70 c~~~~--------------------------------~~v~~G~~a~l~C~~~~~~~~p~p~i~W~k~~~~~l~~~~~~~ 117 (167)
|.+.+ ..+.+|+++.|.|.+. +.|.|.++|+|++ ..+... .
T Consensus 81 C~a~n~~g~~~~~~~l~V~~~~~~p~~~p~i~~~~~~~~v~~g~~v~l~C~~~---g~p~~~v~W~k~~-~~~~~~---~ 153 (304)
T 2yd9_A 81 CVAQNSVGEITVHAKLTVLREDQLPSGFPNIDMGPQLKVVERTRTATMLCAAS---GNPDPEITWFKDF-LPVDPS---A 153 (304)
T ss_dssp EEEECSSCEECCEEEEEEECGGGCCTTCCEEEECCCCEEEETTSCEEECCEEE---CSSCCEEEEEETT-EECCGG---G
T ss_pred EEEECCCCeEEEEEEEEEeccccCCCCCCeeecCCccEEEeCCCeEEEEEECc---cCCCCeEEEEECC-EECcCC---C
Confidence 98632 2345699999999997 4588999999997 455321 1
Q ss_pred CCceEEEccCCeEEEeecCcCCCCcceEEEeeecC
Q psy12724 118 TDGKYLVLPSGELHIRDVGPEDGYKSYQCRTKHRL 152 (167)
Q Consensus 118 ~~~r~~~~~~g~L~I~~v~~~D~~G~Y~C~a~n~~ 152 (167)
...++....++.|.|.+++.+|+ |.|+|.|.|..
T Consensus 154 ~~~~~~~~~~~~L~i~~~~~~d~-G~Y~C~a~n~~ 187 (304)
T 2yd9_A 154 SNGRIKQLRSGALQIESSEETDQ-GKYECVATNSA 187 (304)
T ss_dssp GTTSEEECTTSCEEECSCCGGGC-EEEEEEEEETT
T ss_pred CcceEEeCCCeEEEEccCCcccC-EEEEEEEEeCC
Confidence 23467777889999999999999 99999999987
No 44
>2rik_A Titin; I-SET IG fold, poly-IG linear array, structural protein; 1.60A {Oryctolagus cuniculus} PDB: 2rjm_A
Probab=99.75 E-value=2.7e-17 Score=128.09 Aligned_cols=119 Identities=23% Similarity=0.405 Sum_probs=90.2
Q ss_pred EEEEEeCCcEEEEeecCCCCCCcceeeEEeeCCCceeeecCC--------c-eE--------EEeeeEEEecC-------
Q psy12724 19 DVFVIKGNAAVFKCNLPSFVSDHLDVVSWADTDGGQYQIDNQ--------D-FV--------VSQSYTVNIMD------- 74 (167)
Q Consensus 19 ~~~v~~G~~~~l~C~a~~~~~~~~~~i~W~k~~~~~~~~~~~--------~-~v--------~~g~y~c~~~~------- 74 (167)
...+.+|+++.|.|.+.+.|. +.+.|+|++. .+..... . .+ ..|.|+|.+.+
T Consensus 108 ~~~v~~g~~~~l~C~~~g~p~---~~v~W~~~~~-~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~n~~g~~~~ 183 (284)
T 2rik_A 108 SRIVKQDEHTRYECKIGGSPE---IKVLWYKDET-EIQESSKFRMSFVESVAVLEMYNLSVEDSGDYTCEAHNAAGSASS 183 (284)
T ss_dssp EEEEETTCCEEEEEEEESSSC---CEEEEEETTE-ECCCSSSEEEEEETTEEEEEECSCCGGGCEEEEEEEECSSCEEEE
T ss_pred ceEecCCceEEEEEEEeeeCC---CEEEEEECCE-ECcCCCcEEEEEcCCEEEEEECCCCcccCEEEEEEEEcCCCceeE
Confidence 456889999999999988765 4799999854 3322111 0 11 27999998743
Q ss_pred ------------------eEEEeCCcEEEEeeeCCccCCcceeEEEEeCCCeeeEEeeeecCCceEEEccC---CeEEEe
Q psy12724 75 ------------------EHVLKGNSAVLKCHIPSFVADYVAVESWISDQGEELFVDMTESTDGKYLVLPS---GELHIR 133 (167)
Q Consensus 75 ------------------~~v~~G~~a~l~C~~~~~~~~p~p~i~W~k~~~~~l~~~~~~~~~~r~~~~~~---g~L~I~ 133 (167)
..+.+|+++.|.|.+.+ .|.|.++|+|++ ..+. .+.++.+..+ ..|.|.
T Consensus 184 ~~~l~V~~~p~~~~~~~~~~~~~g~~v~l~C~~~g---~p~~~v~W~~~~-~~~~------~~~~~~~~~~~~~~~L~i~ 253 (284)
T 2rik_A 184 STSLKVKEPPVFRKKPHPVETLKGADVHLECELQG---TPPFQVSWHKDK-RELR------SGKKYKIMSENFLTSIHIL 253 (284)
T ss_dssp EEEEEEECCCBCCSCCCCEEECTTCCEEEEEECBS---SSCCEEEEEETT-EEEC------BTTTEEEEEETTEEEEEEC
T ss_pred EEEEEEecCCcceeCCCcceecCCCeEEEEEEEEe---cCCCEEEEEECC-EECc------CCCCEEEEEcCCEEEEEEc
Confidence 34568999999999974 588999999997 5553 3456665544 379999
Q ss_pred ecCcCCCCcceEEEeeecC
Q psy12724 134 DVGPEDGYKSYQCRTKHRL 152 (167)
Q Consensus 134 ~v~~~D~~G~Y~C~a~n~~ 152 (167)
+++.+|+ |.|+|.|.|..
T Consensus 254 ~v~~~d~-G~Y~C~a~N~~ 271 (284)
T 2rik_A 254 NVDSADI-GEYQCKASNDV 271 (284)
T ss_dssp SCCGGGC-EEEEEEEEETT
T ss_pred CCCcccC-EEEEEEEEeCC
Confidence 9999998 99999999998
No 45
>2r15_A Myomesin-1; sarcomeric protein, IG-like domains, homodimer, immunoglobul domain, muscle protein, thick filament, contractIle protein; 2.24A {Homo sapiens}
Probab=99.75 E-value=4.4e-17 Score=121.55 Aligned_cols=115 Identities=17% Similarity=0.332 Sum_probs=84.6
Q ss_pred eCCcEEEEeecCCCCCCcceeeEEeeCCCceeeecCC--------ce-E--------EEeeeEEEecC------------
Q psy12724 24 KGNAAVFKCNLPSFVSDHLDVVSWADTDGGQYQIDNQ--------DF-V--------VSQSYTVNIMD------------ 74 (167)
Q Consensus 24 ~G~~~~l~C~a~~~~~~~~~~i~W~k~~~~~~~~~~~--------~~-v--------~~g~y~c~~~~------------ 74 (167)
.|+.+.|.|.+.+++.. +.+.|+|++. .+..+.. .. + .+|.|+|.+.+
T Consensus 16 ~~~~~~l~C~~~~~~p~--~~i~W~~~g~-~i~~~~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~~~n~~~~~~~~~~l~ 92 (212)
T 2r15_A 16 TAEGIQLYSFVTYYVED--LKVNWSHNGS-AIRYSDRVKTGVTGEQIWLQINEPTPNDKGKYVMELFDGKTGHQKTVDLS 92 (212)
T ss_dssp CSSEEEEEEEBSSCCSS--CEEEEEETTE-ECCCCSSEEEEEETTEEEEEEESCCGGGCEEEEEEEECSSCEEEEEEEEC
T ss_pred cCceEEEEEEEeccCCC--ceEEEEECCE-EccCCCeEEEEEeCCEEEEEECCCCcccCEEEEEEEecCCcceEEEEEEE
Confidence 57788888888876533 5899999853 3332111 01 1 17999998632
Q ss_pred ----------------------------------eEEEeCCcEEEEeeeCCccCCcceeEEEEeCCCeeeEEeeeecCCc
Q psy12724 75 ----------------------------------EHVLKGNSAVLKCHIPSFVADYVAVESWISDQGEELFVDMTESTDG 120 (167)
Q Consensus 75 ----------------------------------~~v~~G~~a~l~C~~~~~~~~p~p~i~W~k~~~~~l~~~~~~~~~~ 120 (167)
..+.+|+++.|.|.+. +.|.|.++|+|++ ..+. .+.
T Consensus 93 v~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~v~~g~~~~l~C~~~---g~p~p~v~W~~~~-~~~~------~~~ 162 (212)
T 2r15_A 93 GQAYDEAYAEFQRLKQAAIAEKNRARVLGGLPDVVTIQEGKALNLTCNVW---GDPPPEVSWLKNE-KALA------QTD 162 (212)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHSCEEEEBCCSEEEEETTCCEEEEEEEE---CSSCCEEEEEETT-EEEC------CCS
T ss_pred EeeccchhhhccccCcccccccCCCcccccCCCcEEEccCCeEEEEEEEc---CCCCceEEEEECC-eECc------cCC
Confidence 3456799999999998 4599999999997 5553 244
Q ss_pred eEEEccC-C---eEEEeecCcCCCCcceEEEeeecC
Q psy12724 121 KYLVLPS-G---ELHIRDVGPEDGYKSYQCRTKHRL 152 (167)
Q Consensus 121 r~~~~~~-g---~L~I~~v~~~D~~G~Y~C~a~n~~ 152 (167)
++.+..+ + .|.|.+++.+|+ |.|+|.|.|..
T Consensus 163 ~~~~~~~~~~~~~L~i~~~~~~d~-G~Y~C~a~N~~ 197 (212)
T 2r15_A 163 HCNLKFEAGRTAYFTINGVSTADS-GKYGLVVKNKY 197 (212)
T ss_dssp SEEEEEETTTEEEEEESSCCGGGC-EEEEEEEEETT
T ss_pred CEEEEEcCCCEEEEEEcCcchHHC-eEEEEEEEcCC
Confidence 5555432 3 899999999998 99999999987
No 46
>2nzi_A Titin; IG-domain, FNIII-domain, transferase; 2.90A {Homo sapiens}
Probab=99.75 E-value=1.5e-17 Score=130.74 Aligned_cols=128 Identities=19% Similarity=0.321 Sum_probs=97.0
Q ss_pred eeceeeEEeEEEEEeCCcEEEEeecCCCCCCcceeeEEeeCCCceeeecCCc-----------eE--------EEeeeEE
Q psy12724 10 SQYYEAQVYDVFVIKGNAAVFKCNLPSFVSDHLDVVSWADTDGGQYQIDNQD-----------FV--------VSQSYTV 70 (167)
Q Consensus 10 ~~~~~~~~~~~~v~~G~~~~l~C~a~~~~~~~~~~i~W~k~~~~~~~~~~~~-----------~v--------~~g~y~c 70 (167)
.+.|...+.+..+.+|+++.|.|.+.+.|. +.+.|+|++. .+..++.+ .+ ..|.|+|
T Consensus 4 ~P~~~~~p~~~~v~~G~~v~l~C~~~g~p~---~~v~W~~~~~-~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C 79 (305)
T 2nzi_A 4 APHFKEELRNLNVRYQSNATLVCKVTGHPK---PIVKWYRQGK-EIIADGLKYRIQEFKGGYHQLIIASVTDDDATVYQV 79 (305)
T ss_dssp CCEEEECCCCEEECTTCCEEEEEEEECSSC---CEEEEEETTE-ECCCCSSSEEEEEETTTEEEEEESSCCGGGCSEEEE
T ss_pred CCeeeecccceEEeCCCcEEEEEEEeCCCC---CeEEEEECCE-EcccCCCeEEEEECCCCEEEEEEccCChhhCeEEEE
Confidence 356888899999999999999999988765 4799999854 33222111 11 2799999
Q ss_pred EecC------------------------------eEEEeCCcEEEEeeeCCccCCcceeEEEEeCCCeeeEEeeeecCCc
Q psy12724 71 NIMD------------------------------EHVLKGNSAVLKCHIPSFVADYVAVESWISDQGEELFVDMTESTDG 120 (167)
Q Consensus 71 ~~~~------------------------------~~v~~G~~a~l~C~~~~~~~~p~p~i~W~k~~~~~l~~~~~~~~~~ 120 (167)
.+.+ ..+.+|+++.|.|.+.+ .|.|.++|+|++ ..+. ...
T Consensus 80 ~a~n~~g~~~~~~~l~V~~~p~~~~~~~~~~~~~~~~~~g~~~~l~C~~~g---~p~p~i~W~~~~-~~~~------~~~ 149 (305)
T 2nzi_A 80 RATNQGGSVSGTASLEVEVPAKIHLPKTLEGMGAVHALRGEVVSIKIPFSG---KPDPVITWQKGQ-DLID------NNG 149 (305)
T ss_dssp EEEETTEEEEEEEEEEECEEEEECCCHHHHSSCCEEEETTCCEEEEEEEEE---ESCCEEEEEESS-SBCC------SSS
T ss_pred EEEcCCCCccceEEEEEecCCccCCCccccccccEEecCCCEEEEEEEECC---CCCCEEEEEECC-EECC------CCC
Confidence 8632 23456999999999974 588999999987 4542 344
Q ss_pred eEEEcc---CCeEEEee-cCcCCCCcceEEEeeecC
Q psy12724 121 KYLVLP---SGELHIRD-VGPEDGYKSYQCRTKHRL 152 (167)
Q Consensus 121 r~~~~~---~g~L~I~~-v~~~D~~G~Y~C~a~n~~ 152 (167)
++.+.. ++.|.|.+ ++.+|+ |.|+|.|.|..
T Consensus 150 ~~~~~~~~~~~~l~i~~~~~~~d~-G~Y~C~a~N~~ 184 (305)
T 2nzi_A 150 HYQVIVTRSFTSLVFPNGVERKDA-GFYVVCAKNRF 184 (305)
T ss_dssp SCEEEECSSEEEEEETTCCCSTTC-EEEEEEEEETT
T ss_pred cEEEEEcCCceEEEEecCCccCcc-EEEEEEEEeCC
Confidence 555442 35799999 999998 99999999987
No 47
>3b43_A Titin; I-SET IG fold, extended poly-IG filament, elastic FIL structural protein; 3.30A {Oryctolagus cuniculus}
Probab=99.75 E-value=5.5e-18 Score=145.65 Aligned_cols=136 Identities=18% Similarity=0.296 Sum_probs=99.6
Q ss_pred eceeeEEeEEEEEeCCcEEEEeecCCCCCCcceeeEEeeCCCceeeecCC--------c-eE--------EEeeeEEEec
Q psy12724 11 QYYEAQVYDVFVIKGNAAVFKCNLPSFVSDHLDVVSWADTDGGQYQIDNQ--------D-FV--------VSQSYTVNIM 73 (167)
Q Consensus 11 ~~~~~~~~~~~v~~G~~~~l~C~a~~~~~~~~~~i~W~k~~~~~~~~~~~--------~-~v--------~~g~y~c~~~ 73 (167)
+.|...+.+..+.+|+++.|.|.+.+.|.+ .++|+|++. .+..+.. . .+ .+|.|+|.+.
T Consensus 385 P~~~~~~~~~~~~~G~~v~l~C~~~g~P~p---~v~W~k~g~-~l~~~~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~A~ 460 (570)
T 3b43_A 385 PVFRKKPHPVETLKGADVHLECELQGTPPF---QVSWHKDKR-ELRSGKKYKIMSENFLTSIHILNVDSADIGEYQCKAS 460 (570)
T ss_dssp CEECSCCCCEEECTTCCEEEEEEEESSSSC---CCEEEETTE-ECCSSSSEEEEEETTEEEEEECSCCGGGCEEEEEEEE
T ss_pred CeeecCCCceeecCCCEEEEEEEEecCCCC---EEEEEECCE-ECcCCCCEEEEEcCCEEEEEECCCChhhCEEEEEEEE
Confidence 446777888899999999999999988864 799999853 3322111 0 11 2699999875
Q ss_pred C-------------------------eEEEeCCcEEEEeeeCCccCCcceeEEEEeCCCeeeEEeeeecCCceEEEccC-
Q psy12724 74 D-------------------------EHVLKGNSAVLKCHIPSFVADYVAVESWISDQGEELFVDMTESTDGKYLVLPS- 127 (167)
Q Consensus 74 ~-------------------------~~v~~G~~a~l~C~~~~~~~~p~p~i~W~k~~~~~l~~~~~~~~~~r~~~~~~- 127 (167)
| ..+.+|+++.|.|.+. |.|.|.++|+||++ .+.. .+.++.+...
T Consensus 461 N~~G~~~~~~~l~v~~~P~~~~~~~~~~~~~g~~~~l~c~~~---g~p~~~v~W~k~~~-~~~~-----~~~~~~~~~~~ 531 (570)
T 3b43_A 461 NDVGSDTCVGSITLKAPPRFVKKLSDISTVVGEEVQLQATIE---GAEPISVAWFKDKG-EIVR-----ESDNIWISYSE 531 (570)
T ss_dssp CSSCEEEEEEEEEECCCCEEEECCCCBCCBTTCCEEEEEEEE---SCSSCCCEEEETTE-ECCC-----CTTTEEECCCS
T ss_pred ECCCeEEEEEEEEeccCCcccccCCCceecCCCeEEEEEEEe---cCCCCEEEEEeCCe-Eecc-----CCCeEEEEECC
Confidence 4 2346799999999998 45889999999974 3321 2345555422
Q ss_pred --CeEEEeecCcCCCCcceEEEeeecC---cceEEEee
Q psy12724 128 --GELHIRDVGPEDGYKSYQCRTKHRL---TGETRLSA 160 (167)
Q Consensus 128 --g~L~I~~v~~~D~~G~Y~C~a~n~~---~~~~~l~~ 160 (167)
+.|.|.+++.+|+ |.|+|.|.|.+ ...+.|++
T Consensus 532 ~~~~L~i~~~~~~d~-G~Y~C~a~N~~G~~~~~a~L~V 568 (570)
T 3b43_A 532 NIATLQFSRAEPANA-GKYTCQIKNEAGTQECFATLSV 568 (570)
T ss_dssp SEEEEEESSCCTTCC-EEEEEEEECSSCEEEEEEEECC
T ss_pred CEEEEEECcCCHHHC-EEEEEEEEECCcEEEEEEEEEE
Confidence 4799999999998 99999999987 33455554
No 48
>1rhf_A Tyrosine-protein kinase receptor TYRO3; AXL/TYRO3 family, cellular adhesion, ligand-independent DIME mutational analysis, transferase; HET: EPE; 1.96A {Homo sapiens} SCOP: b.1.1.1 b.1.1.4
Probab=99.75 E-value=3e-17 Score=120.10 Aligned_cols=121 Identities=13% Similarity=0.214 Sum_probs=88.4
Q ss_pred eceeeEEeEEEEEeCCcEEEEeecCCCCCCcceeeEEeeCCCceeeec--------CC---ceE--------EEeeeEEE
Q psy12724 11 QYYEAQVYDVFVIKGNAAVFKCNLPSFVSDHLDVVSWADTDGGQYQID--------NQ---DFV--------VSQSYTVN 71 (167)
Q Consensus 11 ~~~~~~~~~~~v~~G~~~~l~C~a~~~~~~~~~~i~W~k~~~~~~~~~--------~~---~~v--------~~g~y~c~ 71 (167)
+.|...|.+..+.+|+++.|.|.+.+.+. +.+.|+|++. .+... .. ..+ ..|.|+|.
T Consensus 3 ~~~~~~p~~~~v~~G~~v~l~C~~~~~p~---~~v~W~k~~~-~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~ 78 (182)
T 1rhf_A 3 LKLMGAPVKLTVSQGQPVKLNCSVEGMEE---PDIQWVKDGA-VVQNLDQLYIPVSEQHWIGFLSLKSVERSDAGRYWCQ 78 (182)
T ss_dssp ----CCCEEEEEETTCCEEEEEEEESCSS---CCEEEEETTE-ECCSSEEEEEEEETTEEEEEEEESSCCGGGCEEEEEE
T ss_pred CEEEeCCcceEEeCCCcEEEEEEEeCCCC---CeEEEEECCe-ecCCCCceEEEecCCCceEEEEEeecCcccCeEEEEE
Confidence 45788899999999999999999998665 3799999753 33211 10 011 27999998
Q ss_pred ecC--------------------------eEEEeCCcEEEEeeeCCccCCcce-eEEEEeCCCeeeEEeeeecCCceEEE
Q psy12724 72 IMD--------------------------EHVLKGNSAVLKCHIPSFVADYVA-VESWISDQGEELFVDMTESTDGKYLV 124 (167)
Q Consensus 72 ~~~--------------------------~~v~~G~~a~l~C~~~~~~~~p~p-~i~W~k~~~~~l~~~~~~~~~~r~~~ 124 (167)
+.+ ..+.+|+++.|.|.+. +.|.| .++|+|++ ..+. ....
T Consensus 79 ~~~~~~~~~~~~~~l~V~~~p~~~~~~~~~~~~~g~~~~l~C~~~---g~p~p~~v~W~~~~-~~~~-------~~~~-- 145 (182)
T 1rhf_A 79 VEDGGETEISQPVWLTVEGVPFFTVEPKDLAVPPNAPFQLSCEAV---GPPEPVTIVWWRGT-TKIG-------GPAP-- 145 (182)
T ss_dssp ESSCTTCEECCCEEEEEECSCEEEECCCCEEECTTCCEEEEEEEE---CSSSCCEEEEEETT-EECS-------CSEE--
T ss_pred EEcCCCcEEEEEEEEEEecCCeEEecCcceEecCCCEEEEEeEec---CCCCCCEEEEEcCC-eECC-------CCCC--
Confidence 742 2456899999999997 45888 89999997 4442 1111
Q ss_pred ccCCeEEEeecCcCCCCcceEEEeeecC
Q psy12724 125 LPSGELHIRDVGPEDGYKSYQCRTKHRL 152 (167)
Q Consensus 125 ~~~g~L~I~~v~~~D~~G~Y~C~a~n~~ 152 (167)
.++.|.|.++ +|+ |.|+|.|.|..
T Consensus 146 -~~~~L~i~~~--~d~-G~Y~C~a~N~~ 169 (182)
T 1rhf_A 146 -SPSVLNVTGV--TQS-TMFSCEAHNLK 169 (182)
T ss_dssp -SSEEEEECCC--SSC-EEEEEEEEETT
T ss_pred -CceEEEEecc--ccC-eEEEEEEECCC
Confidence 5678999998 598 99999999997
No 49
>2gi7_A GPVI protein; IG-like domains, blood clotting, cell adhesion; 2.40A {Homo sapiens}
Probab=99.75 E-value=4.9e-18 Score=125.87 Aligned_cols=123 Identities=14% Similarity=0.178 Sum_probs=85.7
Q ss_pred ceeeEEeEEEEEeCCcEEEEeecCCCCCCcceeeEEeeCCCceeeecCCceE------EEeeeEEEecC-----------
Q psy12724 12 YYEAQVYDVFVIKGNAAVFKCNLPSFVSDHLDVVSWADTDGGQYQIDNQDFV------VSQSYTVNIMD----------- 74 (167)
Q Consensus 12 ~~~~~~~~~~v~~G~~~~l~C~a~~~~~~~~~~i~W~k~~~~~~~~~~~~~v------~~g~y~c~~~~----------- 74 (167)
.+...+.. .|.+|+++.|.|.+.+ +. +.+.|+|++......++...+ .+|.|+|.+.+
T Consensus 10 ~i~~~p~~-~v~~G~~v~L~C~~~~-~~---~~~~W~k~g~~~~~~~~~L~i~~v~~~D~G~Y~C~a~n~~g~~~~s~~~ 84 (184)
T 2gi7_A 10 SLQALPSS-LVPLEKPVTLRCQGPP-GV---DLYRLEKLSSSRYQDQAVLFIPAMKRSLAGRYRCSYQNGSLWSLPSDQL 84 (184)
T ss_dssp EEEEESCS-EEETTCCEEEEEECST-TC---SEEEEEETTTCCEESSSEEEESSCCGGGCEEEEEEEEETTEEBCCCCCE
T ss_pred eEEeCCCc-cccCCCcEEEEEeCCC-CC---CEEEEEECCccccCcccEEEECcCChhhCceEEEEEEcCCCccCCCCCE
Confidence 45666664 8999999999999987 32 479999986541111111111 27999998633
Q ss_pred ------------------eEEEeCCcEEEEeeeCCccCCcceeEEEEeCCCeeeEEeeeecCCceEEEccCCeEEEeecC
Q psy12724 75 ------------------EHVLKGNSAVLKCHIPSFVADYVAVESWISDQGEELFVDMTESTDGKYLVLPSGELHIRDVG 136 (167)
Q Consensus 75 ------------------~~v~~G~~a~l~C~~~~~~~~p~p~i~W~k~~~~~l~~~~~~~~~~r~~~~~~g~L~I~~v~ 136 (167)
..+.+|+++.|.|.+.+ +.+.++|+|++ ..+.. .. .....++.|.|.+++
T Consensus 85 ~l~V~~~~~~p~i~~~p~~~v~~G~~v~l~C~~~~----~~~~~~w~k~g-~~~~~------~~-~~~~~~~~L~i~~v~ 152 (184)
T 2gi7_A 85 ELVATGVFAKPSLSAQPGPAVSSGGDVTLQCQTRY----GFDQFALYKEG-DPAPY------KN-PERWYRASFPIITVT 152 (184)
T ss_dssp EEEEESSSCCCEEEEECCCSSCCTTCEEEEEECSS----CCCEEEEEECC-CCTTS------CC-CCEEEEESSSEEEET
T ss_pred EEEecCcCCCCEEEeCCCceecCCCcEEEEEEcCC----CCcEEEEEECC-CcCcc------ee-cCCCceEEEEEccCC
Confidence 11246999999999863 34688999997 34321 11 112345689999999
Q ss_pred cCCCCcceEEEeeecC
Q psy12724 137 PEDGYKSYQCRTKHRL 152 (167)
Q Consensus 137 ~~D~~G~Y~C~a~n~~ 152 (167)
.+|+ |.|+|.|.|..
T Consensus 153 ~~D~-G~Y~C~a~n~~ 167 (184)
T 2gi7_A 153 AAHS-GTYRCYSFSSR 167 (184)
T ss_dssp TCCS-EEEEEEEECTT
T ss_pred ccCC-eEEEEEEEeCC
Confidence 9999 99999999974
No 50
>2y23_A Myomesin; structural protein, sarcomere, M-BAND, immunoglobulin- like; 2.50A {Homo sapiens}
Probab=99.75 E-value=3.3e-17 Score=128.78 Aligned_cols=126 Identities=17% Similarity=0.151 Sum_probs=90.3
Q ss_pred ceeeEEe-EEEEEeCCcEEEEeecC-CCCCCcceeeEEeeCCCceeeecCC----------ce-E--------EEeeeEE
Q psy12724 12 YYEAQVY-DVFVIKGNAAVFKCNLP-SFVSDHLDVVSWADTDGGQYQIDNQ----------DF-V--------VSQSYTV 70 (167)
Q Consensus 12 ~~~~~~~-~~~v~~G~~~~l~C~a~-~~~~~~~~~i~W~k~~~~~~~~~~~----------~~-v--------~~g~y~c 70 (167)
.+...+. +..+.+|+++.|.|.+. +.|. +.+.|+|++. .+..+.. .+ + ..|.|+|
T Consensus 108 ~~~~~~~~~~~v~~G~~v~l~C~~~~~~p~---~~v~W~~~~~-~i~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C 183 (312)
T 2y23_A 108 TVPVKSELAVEILEKGQVRFWMQAEKLSGN---AKVNYIFNEK-EIFEGPKYKMHIDRNTGIIEMFMEKLQDEDEGTYTF 183 (312)
T ss_dssp BCCEEEEEEEEECSSSCEEEEEEESCCCSS---CEEEEEETTE-EECSSSSCEEEEETTTTEEEEEESCCCGGGCEEEEE
T ss_pred ccccccCCceEEeeCCCEEEEEEEEeCCCC---CEEEEEECCE-ECeeCCcEEEEEccCCCEEEEEEccCCcccCEeEEE
Confidence 3444443 88899999999999998 5654 4799999854 3322110 00 1 1699999
Q ss_pred EecC-------------------------------------------eEEEeCCcEEEEeeeCCccCCcce-eEEEEeCC
Q psy12724 71 NIMD-------------------------------------------EHVLKGNSAVLKCHIPSFVADYVA-VESWISDQ 106 (167)
Q Consensus 71 ~~~~-------------------------------------------~~v~~G~~a~l~C~~~~~~~~p~p-~i~W~k~~ 106 (167)
.+.+ ..+.+|+++.|.|.+.+ .|.| .++|+|++
T Consensus 184 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~v~~G~~~~l~C~~~~---~p~~~~v~W~~~g 260 (312)
T 2y23_A 184 QLQDGKATNHSTVVLVGDVFKKLQKEAEFQRQEWIRKQGPHFVEYLSWEVTGECNVLLKCKVAN---IKKETHIVWYKDE 260 (312)
T ss_dssp EEESSSCEEEEEEEECTHHHHHHHHHHHHHHHHHHHHHSSEEEEEEEEEEETTTEEEEEEEEES---CCSSCEEEEEETT
T ss_pred EEEeCCceEEEEEEEcchhhhhhcccccccccchhhccCCceeecceEEEeCCCEEEEEEEEcC---CCCCCEEEEeeCC
Confidence 5421 25678999999999974 4777 99999997
Q ss_pred CeeeEEeeeecCCceEEEccC-CeEEEeecCcCCCCcceEEEeeecC
Q psy12724 107 GEELFVDMTESTDGKYLVLPS-GELHIRDVGPEDGYKSYQCRTKHRL 152 (167)
Q Consensus 107 ~~~l~~~~~~~~~~r~~~~~~-g~L~I~~v~~~D~~G~Y~C~a~n~~ 152 (167)
..+.. +.++.+..+ +.|.|.+++.+|+ |.|+|.|.|..
T Consensus 261 -~~~~~------~~~~~~~~~~~~L~I~~v~~~d~-G~Y~C~a~N~~ 299 (312)
T 2y23_A 261 -REISV------DEKHDFKDGICTLLITEFSKKDA-GIYEVILKDDR 299 (312)
T ss_dssp -EEEEE------ECCC----CEEEEEECSCSGGGC-EEEEEEEESTT
T ss_pred -EECCC------CCcEEEECCEEEEEECcCCHHHC-EEEEEEEEcCC
Confidence 56642 344544433 5899999999999 99999999998
No 51
>3jz7_A MCAR, CAR, coxsackievirus and adenovirus receptor homolog; cell adhesion molecule, immunoglobuline superfamily, alternative splicing, cell adhesion; 2.19A {Mus musculus} PDB: 3mj7_B* 2npl_X
Probab=99.74 E-value=8.5e-18 Score=125.02 Aligned_cols=130 Identities=15% Similarity=0.234 Sum_probs=88.9
Q ss_pred eeEEeEEEEEeCCcEEEEeecCCCCCCc-ceeeEEeeCC---------------Cceeee-----c------------CC
Q psy12724 14 EAQVYDVFVIKGNAAVFKCNLPSFVSDH-LDVVSWADTD---------------GGQYQI-----D------------NQ 60 (167)
Q Consensus 14 ~~~~~~~~v~~G~~~~l~C~a~~~~~~~-~~~i~W~k~~---------------~~~~~~-----~------------~~ 60 (167)
...++.+.+.+|+++.|.|.+.+.+... .+.+.|.|++ +..+.. . +.
T Consensus 4 ~~~~~~v~v~~G~~v~L~C~~~~~~~~~~~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~ 83 (214)
T 3jz7_A 4 TTPEQRIEKAKGETAYLPCKFTLSPEDQGPLDIEWLISPSDNQIVDQVIILYSGDKIYDNYYPDLKGRVHFTSNDVKSGD 83 (214)
T ss_dssp --CEEEEEEETTSCEEECCBCCCCTTCCSCCEEEEEEEESSSSCCSEEEEEEETTEEECCCCGGGTTTEEESCSCGGGTB
T ss_pred ecCCceEEEecCCCEEEEEEEecCCCCCCcEEEEEEecCCCCCCCceEEEEEeCCeEccccCCccccceEEeccCccCCc
Confidence 3456788999999999999998876321 2479999842 111110 0 00
Q ss_pred ceE--------EEeeeEEEecC-------------------------eEEEeCCcEEEEeeeCCccCCcceeEEEEeCCC
Q psy12724 61 DFV--------VSQSYTVNIMD-------------------------EHVLKGNSAVLKCHIPSFVADYVAVESWISDQG 107 (167)
Q Consensus 61 ~~v--------~~g~y~c~~~~-------------------------~~v~~G~~a~l~C~~~~~~~~p~p~i~W~k~~~ 107 (167)
..+ .+|.|+|.+.+ ..+.+|+++.|.|.+.. +.|.|.++|+|+++
T Consensus 84 ~~L~i~~v~~~D~G~Y~C~~~~~~~~~~~~~~l~V~~~p~~~~~~~~~~~~~g~~v~l~C~~~~--g~p~~~v~W~~~~~ 161 (214)
T 3jz7_A 84 ASINVTNLQLSDIGTYQCKVKKAPGVANKKFLLTVLVKPSGTRCFVDGSEEIGNDFKLKCEPKE--GSLPLQFEWQKLSD 161 (214)
T ss_dssp CCEEECSCCGGGCEEEEEEEEETTEEEEEEEEEEEECCCBSCEEEEESCCBTTCCEEEEEECSB--CCSSCEEEEEECST
T ss_pred ccEEEccCChhhCeEEEEEEEeCCCccccEEEEEEEcCCCCceeeeecceecCCcEEEEecCCC--CCCCCEEEEEECCC
Confidence 011 27999998743 12356999999999932 55899999999653
Q ss_pred eeeEEeeeecCCceEEEccCCeEEEeecCcCCCCcceEEEeeecC
Q psy12724 108 EELFVDMTESTDGKYLVLPSGELHIRDVGPEDGYKSYQCRTKHRL 152 (167)
Q Consensus 108 ~~l~~~~~~~~~~r~~~~~~g~L~I~~v~~~D~~G~Y~C~a~n~~ 152 (167)
.... ...+.....++.|.|.+++.+|+ |.|+|.|.|..
T Consensus 162 ~~~~------~~~~~~~~~~~~L~i~~~~~~d~-G~Y~C~a~N~~ 199 (214)
T 3jz7_A 162 SQTM------PTPWLAEMTSPVISVKNASSEYS-GTYSCTVQNRV 199 (214)
T ss_dssp TCCC------CGGGGGGTTSSEEEECSCCGGGC-EEEEEEEECSS
T ss_pred CCcc------CccceeccCCCEEEEecCCHHHC-EEEEEEEEcCC
Confidence 2221 12223334577999999999998 99999999987
No 52
>3laf_A Deleted in colorectal cancer; netrin-1 receptor, immunoglobulin superfamily, horseshoe, AP; HET: NAG BMA; 2.40A {Rattus norvegicus}
Probab=99.74 E-value=1.2e-17 Score=135.85 Aligned_cols=131 Identities=21% Similarity=0.427 Sum_probs=99.9
Q ss_pred eceeeEEeEEEEEeCCcEEEEeecCCCCCCcceeeEEeeCCCceeee----------cCCceE-----------EEeeeE
Q psy12724 11 QYYEAQVYDVFVIKGNAAVFKCNLPSFVSDHLDVVSWADTDGGQYQI----------DNQDFV-----------VSQSYT 69 (167)
Q Consensus 11 ~~~~~~~~~~~v~~G~~~~l~C~a~~~~~~~~~~i~W~k~~~~~~~~----------~~~~~v-----------~~g~y~ 69 (167)
..|..+|+++.+.+|+++.|.|.+.+... .+.+.|+|++. .+.. ++...+ ..|.|+
T Consensus 22 ~~~~~~P~~~~v~~G~~v~L~C~~~~~~p--~~~v~W~k~g~-~~~~~~~~~~~~~~~~~l~i~~~~~~~~~~~D~G~Y~ 98 (403)
T 3laf_A 22 LHFVSEPSDAVTMRGGNVLLNCSAESDRG--VPVIKWKKDGL-ILALGMDDRKQQLPNGSLLIQNILHSRHHKPDEGLYQ 98 (403)
T ss_dssp SEEEECCCCEEECTTCCEEECCEEECTTC--CCEEEEEETTE-ECCTTSCTTEEECTTSCEEECSCCCBTTBCSSCEEEE
T ss_pred EEEEeCCCceEEecCCcEEEEEEcCCCCC--CceEEEEECCE-ECccCCcccEEEecCCcEEEeeeeccCCCCCcceEEE
Confidence 34889999999999999999999987532 25799999853 3321 111111 379999
Q ss_pred EEecC---------------------------eEEEeCCcEEEEeeeCCccCCcceeEEEEeCCCeeeEEeeeecCCceE
Q psy12724 70 VNIMD---------------------------EHVLKGNSAVLKCHIPSFVADYVAVESWISDQGEELFVDMTESTDGKY 122 (167)
Q Consensus 70 c~~~~---------------------------~~v~~G~~a~l~C~~~~~~~~p~p~i~W~k~~~~~l~~~~~~~~~~r~ 122 (167)
|.+.+ ..+.+|+++.|.|.+. +.|.|.++|+|++ ..+.+. ....++
T Consensus 99 C~~~~~~~~~~~s~~~~l~v~~p~~~~~~~~~~~~~~G~~v~l~C~~~---~~p~~~v~W~~~~-~~~~~~---~~~~~~ 171 (403)
T 3laf_A 99 CEASLGDSGSIISRTAKVMVAGPLRFLSQTESITAFMGDTVLLKCEVI---GDPMPTIHWQKNQ-QDLNPI---PGDSRV 171 (403)
T ss_dssp EEEECGGGCEEECCCEEEEECCCCEECSCCCCEEEETTSCEEECCCEE---CSSCCEEEEEESS-SBCCCC---TTCCSE
T ss_pred EEEEeCCCccEEEEEEEEEecCCCccccCCCcEEEEcCCeEEEEEEEc---ccCCCeEEEEECC-Eecccc---CCceEE
Confidence 98742 3457899999999997 4588899999997 454321 235667
Q ss_pred EEccCCeEEEeecCcCCCCcceEEEeeecC
Q psy12724 123 LVLPSGELHIRDVGPEDGYKSYQCRTKHRL 152 (167)
Q Consensus 123 ~~~~~g~L~I~~v~~~D~~G~Y~C~a~n~~ 152 (167)
....++.|.|.+++.+|+ |.|+|.|.|..
T Consensus 172 ~~~~~~~L~i~~~~~~d~-G~Y~C~~~n~~ 200 (403)
T 3laf_A 172 VVLPSGALQISRLQPGDS-GVYRCSARNPA 200 (403)
T ss_dssp EECTTSCEEECSCCGGGC-EEEEEEEECSS
T ss_pred EEcCCceEEEcccccccC-EEEEEEEEcCC
Confidence 777889999999999999 99999999965
No 53
>1cs6_A Axonin-1; neural cell adhesion, cell adhesion; 1.80A {Gallus gallus} SCOP: b.1.1.4 b.1.1.4 b.1.1.4 b.1.1.4 PDB: 2om5_A
Probab=99.74 E-value=2.8e-17 Score=133.22 Aligned_cols=120 Identities=18% Similarity=0.346 Sum_probs=92.7
Q ss_pred EeEEEEEeCCcEEEEeecCCCCCCcceeeEEeeCCCceeee---cCCceE--------EEeeeEEEecC-----------
Q psy12724 17 VYDVFVIKGNAAVFKCNLPSFVSDHLDVVSWADTDGGQYQI---DNQDFV--------VSQSYTVNIMD----------- 74 (167)
Q Consensus 17 ~~~~~v~~G~~~~l~C~a~~~~~~~~~~i~W~k~~~~~~~~---~~~~~v--------~~g~y~c~~~~----------- 74 (167)
+.+..+.+|+++.|.|.+.+.|. +.+.|+|+++. +.. .....+ ..|.|+|.+.+
T Consensus 214 ~~~~~~~~G~~v~l~C~~~g~p~---~~i~W~~~~~~-~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~l 289 (382)
T 1cs6_A 214 PADTYALTGQMVTLECFAFGNPV---PQIKWRKLDGS-QTSKWLSSEPLLHIQNVDFEDEGTYECEAENIKGRDTYQGRI 289 (382)
T ss_dssp CSEEEEETTCCEEEECEEEEESC---CEEEEEECCSC-CSCCCSBSSSEEEECSCCGGGCEEEEEEEEETTEEEEEEEEE
T ss_pred CCceEEeCCCeEEEEEEEccCCC---CEEEEEECCcc-cccEEecCCcEEEEccCChhhCEEEEEEEEcCCCeEEEEEEE
Confidence 45778999999999999988764 47999998764 221 111111 27999998732
Q ss_pred --------------eEEEeCCcEEEEeeeCCccCCcceeEEEEeCCCeeeEEeeeecCCceEEEccCCeEEEeecCcCCC
Q psy12724 75 --------------EHVLKGNSAVLKCHIPSFVADYVAVESWISDQGEELFVDMTESTDGKYLVLPSGELHIRDVGPEDG 140 (167)
Q Consensus 75 --------------~~v~~G~~a~l~C~~~~~~~~p~p~i~W~k~~~~~l~~~~~~~~~~r~~~~~~g~L~I~~v~~~D~ 140 (167)
..+.+|+++.|.|.+.+ .|.|.++|+|++ ..+. ...|+.+ .++.|.|.+++.+|+
T Consensus 290 ~V~~~p~~~~~~~~~~~~~g~~~~l~C~~~g---~p~p~v~W~~~g-~~~~------~~~~~~~-~~~~L~i~~v~~~d~ 358 (382)
T 1cs6_A 290 IIHAQPDWLDVITDTEADIGSDLRWSCVASG---KPRPAVRWLRDG-QPLA------SQNRIEV-SGGELRFSKLVLEDS 358 (382)
T ss_dssp EEEEEEEEEECCCCEEEETTCCEEEECEEEE---ESCCEEEEEETT-EECC------CCSSEEE-ETTEEEESSCCGGGC
T ss_pred EEecCCCcccCCCccEEcCCCeEEEEEEeee---ecCCEEEEEECC-EECC------CCceEEE-ECCEEEECcCCcccC
Confidence 34567999999999974 588999999997 5553 3456655 478999999999999
Q ss_pred CcceEEEeeecC
Q psy12724 141 YKSYQCRTKHRL 152 (167)
Q Consensus 141 ~G~Y~C~a~n~~ 152 (167)
|.|+|.|.|..
T Consensus 359 -G~Y~C~a~N~~ 369 (382)
T 1cs6_A 359 -GMYQCVAENKH 369 (382)
T ss_dssp -EEEEEEEEETT
T ss_pred -EEEEEEEEeCC
Confidence 99999999987
No 54
>3mj6_A Junctional adhesion molecule-like; immunoglobulin tandem domain, cell adhesion, cell junction, glycoprotein, immunoglobulin domain, membrane; HET: NAG FUC; 2.19A {Mus musculus} PDB: 3mj7_A* 3mj9_A*
Probab=99.74 E-value=2e-17 Score=128.03 Aligned_cols=148 Identities=17% Similarity=0.254 Sum_probs=93.8
Q ss_pred ceeeEEeEEEEEeCCcEEEEeecCCCCCCcceeeEEeeCCCce----e--e-----------------ec-------CCc
Q psy12724 12 YYEAQVYDVFVIKGNAAVFKCNLPSFVSDHLDVVSWADTDGGQ----Y--Q-----------------ID-------NQD 61 (167)
Q Consensus 12 ~~~~~~~~~~v~~G~~~~l~C~a~~~~~~~~~~i~W~k~~~~~----~--~-----------------~~-------~~~ 61 (167)
.+...+.++.+.+|+++.|.|.+....+...+.+.|.|++... + . -. ..+
T Consensus 7 ~v~~~~~~~~v~~G~~v~L~C~~~~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L 86 (268)
T 3mj6_A 7 GLTVSSPQLRVHVGESVLMGCVVQRTEEKHVDRVDWLFSKDKDDASEYVLFYYSNLSVPTGRFQNRSHLVGDTFHNDGSL 86 (268)
T ss_dssp -----CCEEEEETTCCEEECCBCCCSSCCCEEEEEEEEESSSTTCCEEEEEEETTEEEECGGGTTTEEECSCTTTTBCCE
T ss_pred ccccCCCceEEecCCcEEEEEEeecCCCCceEEEEEEEeCCCCCceEEEEEEcCCCcccCccccCceEEeecCCCCEEEE
Confidence 4567788899999999999999984433345689999965321 0 0 00 001
Q ss_pred eE------EEeeeEEEecC----------------------eEEEeCCcEEEEeeeCCccCCcceeEEEEeCCCeee---
Q psy12724 62 FV------VSQSYTVNIMD----------------------EHVLKGNSAVLKCHIPSFVADYVAVESWISDQGEEL--- 110 (167)
Q Consensus 62 ~v------~~g~y~c~~~~----------------------~~v~~G~~a~l~C~~~~~~~~p~p~i~W~k~~~~~l--- 110 (167)
.+ .+|.|+|.+.+ ..+.+|+++.|.|.+.+..+.|.|.++|+|+++...
T Consensus 87 ~I~~v~~~D~G~Y~C~~~~~~~~~~~~~~~~l~V~~~~p~~~~v~~G~~v~L~C~~~~~~~~p~~~v~W~~~~~~~~~~~ 166 (268)
T 3mj6_A 87 LLQDVQKADEGIYTCEIRLKNESMVMKKPVELWVLPEEPRDLRVRVGDTTQMRCSIQSTEEKRVTKVNWMFSSGSHTEEE 166 (268)
T ss_dssp EECSCCGGGCEEEEEEEEETTCCCEEEEEEEEEEECCCCSEEEEETTCCEEECCBCEESSSSCCCEEEEEEECTTCSSCE
T ss_pred EECCCCHhHCEEEEEEEEecCCcceEEEEEEEEEeccCCCccccccCCcEEEEEEecCCCCCCccceEEEecCCCCCcce
Confidence 11 27999998732 345689999999999332256899999999543211
Q ss_pred --E----------EeeeecCCceEEE-----ccCCeEEEeecCcCCCCcceEEEeeecC---cceEEEee
Q psy12724 111 --F----------VDMTESTDGKYLV-----LPSGELHIRDVGPEDGYKSYQCRTKHRL---TGETRLSA 160 (167)
Q Consensus 111 --~----------~~~~~~~~~r~~~-----~~~g~L~I~~v~~~D~~G~Y~C~a~n~~---~~~~~l~~ 160 (167)
. +.....-..|..+ ..++.|.|.+++.+|+ |.|+|.|.|.. +..+.|.+
T Consensus 167 ~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~i~~v~~~D~-G~Y~C~a~n~~g~~~~~~~l~V 235 (268)
T 3mj6_A 167 TVLSYDSNMRSGKFQSLGRFRNRVDLTGDISRNDGSIKLQTVKESDQ-GIYTCSIYVGKLESRKTIVLHV 235 (268)
T ss_dssp EEEEEETTSSSCEEECSSTTTTTEEECSCGGGTBCCEEECSCCGGGC-EEEEEEEEETTEEEEEEEEEEE
T ss_pred eEEEecCCCCccccccccccccceEeeccCCCCeEEEEECcCChhhC-eEEEEEEEcCCceEEEEEEEEE
Confidence 0 0000000123333 3467899999999999 99999999976 33444544
No 55
>3p3y_A Neurofascin; IG domains, cell adhesion; HET: NAG; 2.60A {Homo sapiens} PDB: 3p40_A*
Probab=99.74 E-value=2.2e-17 Score=134.19 Aligned_cols=130 Identities=16% Similarity=0.289 Sum_probs=94.0
Q ss_pred eEEEEEeCCcEEEEeecCCCCCCcceeeEEeeCCCceeeecC------CceE--------EEeeeEEEecC---------
Q psy12724 18 YDVFVIKGNAAVFKCNLPSFVSDHLDVVSWADTDGGQYQIDN------QDFV--------VSQSYTVNIMD--------- 74 (167)
Q Consensus 18 ~~~~v~~G~~~~l~C~a~~~~~~~~~~i~W~k~~~~~~~~~~------~~~v--------~~g~y~c~~~~--------- 74 (167)
.+..+.+|+++.|.|.+.+.|.+ .++|+|++.. +..+. ...+ ..|.|+|.+.+
T Consensus 230 ~~~~~~~G~~v~l~C~~~g~p~~---~v~W~~~~~~-~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~n~~g~~~~~~ 305 (404)
T 3p3y_A 230 SSQMVLRGMDLLLECIASGVPTP---DIAWYKKGGD-LPSDKAKFENFNKALRITNVSEEDSGEYFCLASNKMGSIRHTI 305 (404)
T ss_dssp EEEEEETTSCEEEECCBCCSSCC---EEEEEETTBC-CCTTTEEEEGGGTEEEESSCCGGGCEEEEEEEECSSCEEEEEE
T ss_pred CCceEecCCCEEEEEEECCCCCC---cEEEEECCEE-CCCCcccccccCceEEEccCCHhHCEEEEEEEEeCCCcEEEEE
Confidence 56779999999999999988754 7999998653 32111 0111 27999998743
Q ss_pred ----------------eEEEeCCcEEEEeeeCCccCCcceeEEEEeCCCeeeEEeeeecCCceEEEccCCeEEEeecCcC
Q psy12724 75 ----------------EHVLKGNSAVLKCHIPSFVADYVAVESWISDQGEELFVDMTESTDGKYLVLPSGELHIRDVGPE 138 (167)
Q Consensus 75 ----------------~~v~~G~~a~l~C~~~~~~~~p~p~i~W~k~~~~~l~~~~~~~~~~r~~~~~~g~L~I~~v~~~ 138 (167)
..+.+|+++.|.|.+.+ .|.|.++|+|++ ..+... ....++ ...++.|.|.+++.+
T Consensus 306 ~l~V~~~p~~~~~~~~~~v~~g~~~~l~C~~~g---~p~p~v~W~~~g-~~~~~~---~~~~~~-~~~~~~L~i~~v~~~ 377 (404)
T 3p3y_A 306 SVRVKAAPYWLDEPKNLILAPGEDGRLVCRANG---NPKPTVQWMVNG-EPLQSA---PPNPNR-EVAGDTIIFRDTQIS 377 (404)
T ss_dssp EEEEEEEEEEEECCCCEEECTTCCEEEECEEEE---ESCCEEEEEETT-EEGGGS---CCCTTE-EEETTEEEESSCCSS
T ss_pred EEEEeCCCeeeccCCcceeecCCcEEEEEEccc---cCCCceEEEECC-EecCCC---CCCceE-EecCCEEEEeecCHH
Confidence 34557999999999974 588999999997 455321 011233 335779999999999
Q ss_pred CCCcceEEEeeecC---cceEEEee
Q psy12724 139 DGYKSYQCRTKHRL---TGETRLSA 160 (167)
Q Consensus 139 D~~G~Y~C~a~n~~---~~~~~l~~ 160 (167)
|+ |.|+|.|.|.. ...+.|.+
T Consensus 378 d~-G~Y~C~a~N~~G~~~~~~~l~V 401 (404)
T 3p3y_A 378 SR-AVYQCNTSNEHGYLLANAFVSV 401 (404)
T ss_dssp CC-CEEEEEEEETTEEEEEEEEEEE
T ss_pred HC-EEEEEEEEeCCCcEEEEEEEEE
Confidence 99 99999999987 33444544
No 56
>1uct_A Immunoglobulin alpha FC receptor; beta stands, immune system; 2.10A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 PDB: 1ovz_A* 1ow0_C*
Probab=99.74 E-value=2.3e-17 Score=126.19 Aligned_cols=135 Identities=12% Similarity=0.115 Sum_probs=92.5
Q ss_pred eceeeEEeEEEEEeCCcEEEEeecCCCCCCcceeeEEeeCCCceeee--------cCC--ceE-------EEeeeEEEec
Q psy12724 11 QYYEAQVYDVFVIKGNAAVFKCNLPSFVSDHLDVVSWADTDGGQYQI--------DNQ--DFV-------VSQSYTVNIM 73 (167)
Q Consensus 11 ~~~~~~~~~~~v~~G~~~~l~C~a~~~~~~~~~~i~W~k~~~~~~~~--------~~~--~~v-------~~g~y~c~~~ 73 (167)
+.+...|. ..|.+|+++.|.|.+.+ +. +.+.|+|++...... +.. ... .+|.|+|.+.
T Consensus 10 P~i~~~p~-~~v~~G~~vtL~C~~~~-~~---~~~~W~k~g~~~~~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~ 84 (218)
T 1uct_A 10 PFISAKSS-PVIPLDGSVKIQCQAIR-EA---YLTQLMIIKNSTYREIGRRLKFWNETDPEFVIDHMDANKAGRYQCQYR 84 (218)
T ss_dssp CCEEESSC-SEEETTCCEEEEECCCT-TC---SEEEEEEEETTEEEECSEECC----CCCEEEECSCCGGGCEEEEEEEE
T ss_pred CEEEecCC-CccCCCCCEEEEEEcCC-CC---CEEEEEECCCcccccccccCCCCcceeeEEEEcccccccCEEEEEEEE
Confidence 34666666 57999999999999976 32 479999986543211 111 111 2799999763
Q ss_pred C-----------------------------eEEEeCCcEEEEeeeCCccCCcceeEEEEeCCCeeeEEeeeecCCceEEE
Q psy12724 74 D-----------------------------EHVLKGNSAVLKCHIPSFVADYVAVESWISDQGEELFVDMTESTDGKYLV 124 (167)
Q Consensus 74 ~-----------------------------~~v~~G~~a~l~C~~~~~~~~p~p~i~W~k~~~~~l~~~~~~~~~~r~~~ 124 (167)
+ ..+.+|++++|.|.+. +.|.|.++|+||+ ..+. ..+...
T Consensus 85 n~~~~~~~s~~~~l~V~~~~~~P~i~~~p~~~v~~G~~v~L~C~~~---~~~~~~~~W~k~g-~~~~-------~~~~~~ 153 (218)
T 1uct_A 85 IGHYRFRYSDTLELVVTGLYGKPFLSADRGLVLMPGENISLTCSSA---HIPFDRFSLAKEG-ELSL-------PQHQSG 153 (218)
T ss_dssp ETTTEEEECCCEEEEEECSSCCCEEEESSCSEECTTCCCEEEEECS---SSCCSEEEEEETT-CSSC-------CSEEEC
T ss_pred cCCCceeecCCEEEEEcCcccCCEEEeCCCCccCCCCCEEEEEeCC---CCCCCEEEEEECC-Cccc-------ccccCC
Confidence 2 2345799999999654 3477889999997 3442 122223
Q ss_pred ccCCeEEEeecCcCCCCcceEEEeeecC--------cceEEEeeeC
Q psy12724 125 LPSGELHIRDVGPEDGYKSYQCRTKHRL--------TGETRLSATK 162 (167)
Q Consensus 125 ~~~g~L~I~~v~~~D~~G~Y~C~a~n~~--------~~~~~l~~~~ 162 (167)
..++.|.|.+++.+|+ |.|+|.|.|.. +..+.|.+++
T Consensus 154 ~~~~~L~I~~v~~~D~-G~Y~C~a~n~~~~~~~s~~S~~~~l~V~g 198 (218)
T 1uct_A 154 EHPANFSLGPVDLNVS-GIYRCYGWYNRSPYLWSFPSNALELVVTD 198 (218)
T ss_dssp SSSEEEECCSCCGGGC-EEEEEEEECTTSTTEECCCCCCEEEEEC-
T ss_pred CccCEEEEccCCcccC-EEEEEEEEcCCCCCcCCCCCCcEEEEEec
Confidence 3567899999999999 99999999752 3455666644
No 57
>2x1w_L Vascular endothelial growth factor receptor 2; hormone-signaling protein complex, angiogenesis, glycoprotein, HOST-virus interaction, membrane; HET: NAG BMA; 2.70A {Homo sapiens} PDB: 2x1x_R*
Probab=99.73 E-value=3.2e-17 Score=123.93 Aligned_cols=140 Identities=14% Similarity=0.075 Sum_probs=89.2
Q ss_pred eEEeEEEEEeC--CcEEEEeecCCCCCCcceeeEEeeC--CCceeeecC------CceE--------EEeeeEEEecC--
Q psy12724 15 AQVYDVFVIKG--NAAVFKCNLPSFVSDHLDVVSWADT--DGGQYQIDN------QDFV--------VSQSYTVNIMD-- 74 (167)
Q Consensus 15 ~~~~~~~v~~G--~~~~l~C~a~~~~~~~~~~i~W~k~--~~~~~~~~~------~~~v--------~~g~y~c~~~~-- 74 (167)
.+++++.|.+| +++.|.|.+.+ |. +.++|.|. ++..+..+. ...+ .+|.|+|.+.+
T Consensus 12 ~~p~~v~v~eG~~~~v~L~C~~~~-p~---~~v~w~~~~~~g~~~~~~~~~~~~~~~~l~I~~v~~~D~G~Y~C~a~n~~ 87 (213)
T 2x1w_L 12 DQHGVVYITENKNKTVVIPCLGSI-SN---LNVSLCARYPEKRFVPDGNRISWDSKKGFTIPSYMISYAGMVFCEAKIND 87 (213)
T ss_dssp --CEEEEECCSTTCEEEECCCBSS-TT---CCEEEEEETTTEEECCCSSSCEEETTTEEEEEGGGTTTCSEEEEEEC---
T ss_pred CCceEEEEecCCCccEEEeeccCC-CC---cEEEEEhhcCCCccccCCCcccccCCccEEEccCChhcCceEEEEEEECC
Confidence 35689999999 99999999976 33 46999885 454332211 1111 27999998632
Q ss_pred ---------------------------eEEEeCCcEEEEeeeCCccCCcceeEEEEeCCCeeeEEee--e-ecCCce--E
Q psy12724 75 ---------------------------EHVLKGNSAVLKCHIPSFVADYVAVESWISDQGEELFVDM--T-ESTDGK--Y 122 (167)
Q Consensus 75 ---------------------------~~v~~G~~a~l~C~~~~~~~~p~p~i~W~k~~~~~l~~~~--~-~~~~~r--~ 122 (167)
..+.+|+++.|.|.+.+. ..|.+.++|+|++. .+.... . .....+ .
T Consensus 88 ~~~~s~~~~l~v~~~~~p~~~~~~~~~~~v~~G~~v~L~C~~~g~-p~~~~~i~W~~~g~-~~~~~~~~~~~~~~~~~~~ 165 (213)
T 2x1w_L 88 ESYQSIMYIVVVVGYRIYDVVLSPSHGIELSVGEKLVLNCTARTE-LNVGIDFNWEYPSS-KHQHKKLVNRDLKTQSGSE 165 (213)
T ss_dssp -CEECCCEEEEECBCCEEEEEEESCSCEEEETTCCEEEEEEEEEC-TTBCCEEEEECSCS-SCCSEEEEEEEECCCSSCS
T ss_pred eeEEEEEEEEEEeCCcccceEEcCCCCeEEcCCCCEEEEEEEECC-CCCceEEEEEecCC-ccceEEEeccccccccCcc
Confidence 145789999999999743 23445789999874 321100 0 000000 0
Q ss_pred EEccCCeEEEeecCcCCCCcceEEEeeecC---cceEEEeee
Q psy12724 123 LVLPSGELHIRDVGPEDGYKSYQCRTKHRL---TGETRLSAT 161 (167)
Q Consensus 123 ~~~~~g~L~I~~v~~~D~~G~Y~C~a~n~~---~~~~~l~~~ 161 (167)
.....+.|.|.+++.+|+ |.|+|.|.|.. +..+.|.+.
T Consensus 166 ~~~~~~~L~I~~v~~~D~-G~Y~C~a~N~~g~~~~~~~l~V~ 206 (213)
T 2x1w_L 166 MKKFLSTLTIDGVTRSDQ-GLYTCAASSGLMTKKNSTFVRVH 206 (213)
T ss_dssp CEEEEEEEEESSCCGGGC-EEEEEEEECSSCEEEEEEEEEEE
T ss_pred ceeeeEEEEECCCCcccC-EEEEEEEecCCCcEEEEEEEEEe
Confidence 001134799999999999 99999999987 344555553
No 58
>2jll_A NCAM2, neural cell adhesion molecule 2; immunoglobulin domain, immunoglobulin superfamily, transmembrane, phosphoprotein, membrane, glycoprotein; HET: NAG; 2.30A {Homo sapiens} PDB: 2xyc_A* 2jlk_A* 2doc_A
Probab=99.73 E-value=4.5e-17 Score=132.06 Aligned_cols=125 Identities=16% Similarity=0.257 Sum_probs=92.6
Q ss_pred EEeEEEEEeCCcEEEEeecCCCCCCcceeeEEeeCC-Cceeeec----CCc----------eE--------EEeeeEEEe
Q psy12724 16 QVYDVFVIKGNAAVFKCNLPSFVSDHLDVVSWADTD-GGQYQID----NQD----------FV--------VSQSYTVNI 72 (167)
Q Consensus 16 ~~~~~~v~~G~~~~l~C~a~~~~~~~~~~i~W~k~~-~~~~~~~----~~~----------~v--------~~g~y~c~~ 72 (167)
.+.+..+.+|+++.|.|.+.+.|. |.|.|+|++ +..+..+ ..+ .+ .+|.|+|.+
T Consensus 6 ~~~~~~~~~G~~v~l~C~~~g~p~---p~v~W~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~a 82 (389)
T 2jll_A 6 QLKNETTYENGQVTLVCDAEGEPI---PEITWKRAVDGFTFTEGDKSLDGRIEVKGQHGSSSLHIKDVKLSDSGRYDCEA 82 (389)
T ss_dssp ECCCEEEETTSEEEEEEEEECSSC---CEEEEEETTTTEEECC--CCSSSSEEEEECSSEEEEEEESCCGGGCEEEEEEE
T ss_pred ecCceEEeCCCeEEEEEEeecccC---CeEEEEeCCCCceeccCcCCCCCeEEEeccCCcceEEEcccChhhCEEEEEEE
Confidence 367788999999999999998875 479999982 4333221 011 11 179999998
Q ss_pred cC-------------------------eEEEeCCcEEEEeeeCCccCCcceeEEEEeCCCeeeEEeeeecCCceEEEccC
Q psy12724 73 MD-------------------------EHVLKGNSAVLKCHIPSFVADYVAVESWISDQGEELFVDMTESTDGKYLVLPS 127 (167)
Q Consensus 73 ~~-------------------------~~v~~G~~a~l~C~~~~~~~~p~p~i~W~k~~~~~l~~~~~~~~~~r~~~~~~ 127 (167)
.+ ..+.+|+++.|.|.+.+ +|.|.++|+|++ ..+.. ....++.+..+
T Consensus 83 ~n~~g~~~~~~~l~V~~~P~~~~~~~~~~~~~g~~~~l~C~~~g---~p~~~i~W~~~g-~~l~~----~~~~~~~~~~~ 154 (389)
T 2jll_A 83 ASRIGGHQKSMYLDIEYAPKFISNQTIYYSWEGNPINISCDVKS---NPPASIHWRRDK-LVLPA----KNTTNLKTYST 154 (389)
T ss_dssp ECSSCEEEEEEEEEEEEEEEECCSCCEEEECTTCCEEEEECEEE---ESCCEEEEEETT-EESSC----TTCTTEEEEEC
T ss_pred EeCCCCcceEEEEEEEeCCEEecCcceEEeccCCEEEEEEEEEe---cCCCeEEEEECC-ccCCc----ccCceEEEecc
Confidence 54 13467999999999984 588999999997 45532 12235655544
Q ss_pred C---eEEEeecCcCCCCcceEEEeeecC
Q psy12724 128 G---ELHIRDVGPEDGYKSYQCRTKHRL 152 (167)
Q Consensus 128 g---~L~I~~v~~~D~~G~Y~C~a~n~~ 152 (167)
+ .|.|.+++.+|+ |.|+|.|.|..
T Consensus 155 ~~~~~L~i~~~~~~d~-G~Y~C~a~N~~ 181 (389)
T 2jll_A 155 GRKMILEIAPTSDNDF-GRYNCTATNHI 181 (389)
T ss_dssp SSCEEEEECCCSTTSS-EEEEEEEEETT
T ss_pred CCEEEEEECCCChhhC-EEEEEEEEcCC
Confidence 3 699999999998 99999999987
No 59
>3rjd_A High affinity immunoglobulin gamma FC receptor I; immune system; HET: NAG MAN FUC P33; 2.65A {Homo sapiens}
Probab=99.73 E-value=6.7e-17 Score=124.07 Aligned_cols=124 Identities=14% Similarity=0.155 Sum_probs=94.4
Q ss_pred eceeeEEeEEEEEeCCcEEEEeecCCCCCCcceeeEEeeCCCceeeecCCceE-------EEeeeEEEecC---------
Q psy12724 11 QYYEAQVYDVFVIKGNAAVFKCNLPSFVSDHLDVVSWADTDGGQYQIDNQDFV-------VSQSYTVNIMD--------- 74 (167)
Q Consensus 11 ~~~~~~~~~~~v~~G~~~~l~C~a~~~~~~~~~~i~W~k~~~~~~~~~~~~~v-------~~g~y~c~~~~--------- 74 (167)
+.+...|.+..+.+|+++.|.|.+.+.+.+ ..+.|+|++. .+..+..... ..|.|+|.+.+
T Consensus 2 P~i~~~p~~~~v~~G~~v~l~C~~~~~~~~--~~~~W~~~g~-~~~~~~~~l~i~~~~~~d~G~Y~C~~~~~~~s~~~~l 78 (262)
T 3rjd_A 2 AVITLQPPWVSVFQEETVTLHCEVLHLPGS--SSTQWFLNGT-ATQTSTPSYRITSASVNDSGEYRCQRGLSGRSDPIQL 78 (262)
T ss_dssp CEEEESSCCSEEETTCCEEEEEECSSCCCT--TCEEEEETTE-ECSCCSSEEEESSCCGGGCEEEEEEESSSCCCCCEEE
T ss_pred CeEecCCCcEEeeCCCeEEEEEECCCCCCC--ceEEEEECCE-EeeccCCeEEEecCCcccCeEEEEEEecCCccccEEE
Confidence 457788888999999999999999887653 2699999743 4433222211 27999998743
Q ss_pred -------------eEEEeCCcEEEEeeeCCccCCcceeEEEEeCCCeeeEEeeeecCCceEEEccCCeEEEeecCcCCCC
Q psy12724 75 -------------EHVLKGNSAVLKCHIPSFVADYVAVESWISDQGEELFVDMTESTDGKYLVLPSGELHIRDVGPEDGY 141 (167)
Q Consensus 75 -------------~~v~~G~~a~l~C~~~~~~~~p~p~i~W~k~~~~~l~~~~~~~~~~r~~~~~~g~L~I~~v~~~D~~ 141 (167)
..+.+|+++.|.|.+.. +.|.+.++|+|++ ..+... ..++.|.|.+++.+|+
T Consensus 79 ~v~~~~~~~~~~~~~~~~g~~v~l~C~~~~--~~p~~~v~W~~~g-~~~~~~-----------~~~~~l~i~~~~~~d~- 143 (262)
T 3rjd_A 79 EIHRGWLLLQVSSRVFTEGEPLALRCHAWK--DKLVYNVLYYRNG-KAFKFF-----------HWNSNLTILKTNISHN- 143 (262)
T ss_dssp EEECSSEEEEESCSEEETTSCEEEEEEEGG--GCCCEEEEEEETT-EEEEEE-----------EECCCEEESSCCGGGC-
T ss_pred EEeccceEecCCCeEEecCCeEEEEEEccC--CCCCceEEEEECC-cccccc-----------CCCCeEEEEECChhhC-
Confidence 24568999999999943 4588899999997 454211 1257899999999999
Q ss_pred cceEEEeeecC
Q psy12724 142 KSYQCRTKHRL 152 (167)
Q Consensus 142 G~Y~C~a~n~~ 152 (167)
|.|+|.|.|..
T Consensus 144 G~Y~C~~~n~~ 154 (262)
T 3rjd_A 144 GTYHCSGMGKH 154 (262)
T ss_dssp EEEEEEEESSS
T ss_pred EEEEEEEeCCC
Confidence 99999999987
No 60
>3b43_A Titin; I-SET IG fold, extended poly-IG filament, elastic FIL structural protein; 3.30A {Oryctolagus cuniculus}
Probab=99.73 E-value=2.9e-17 Score=141.16 Aligned_cols=128 Identities=17% Similarity=0.263 Sum_probs=95.8
Q ss_pred eeceeeEEeEEEEEeCCcEEEEeecCCCCCCcceeeEEeeCCCceeeecCC--------c-eE--------EEeeeEEEe
Q psy12724 10 SQYYEAQVYDVFVIKGNAAVFKCNLPSFVSDHLDVVSWADTDGGQYQIDNQ--------D-FV--------VSQSYTVNI 72 (167)
Q Consensus 10 ~~~~~~~~~~~~v~~G~~~~l~C~a~~~~~~~~~~i~W~k~~~~~~~~~~~--------~-~v--------~~g~y~c~~ 72 (167)
.+.|...++++.+.+|+++.|.|.+.+.|. |.++|+|++.. +..+.. . .+ ..|.|+|.+
T Consensus 5 pP~f~~~~~~~~v~~G~~v~L~C~~~g~p~---~~v~W~k~g~~-l~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a 80 (570)
T 3b43_A 5 PPYFIEPLEHVEAAIGEPITLQCKVDGTPE---IRIAWYKEHTK-LRSAPAYKMQFKNNVASLVINKVDHSDVGEYTCKA 80 (570)
T ss_dssp CCEEEECCCCEEECTTSCEEEEEEEESSSS---CEEEEECSSSB-CCCCSSEEEECCTTEEEEEESSCCGGGCEEEEEEE
T ss_pred CCcceEECCceEEcCCCEEEEEEEEccCCC---CEEEEEECCEE-ccCCCCEEEEEECCEEEEEEccCChhhCEEEEEEE
Confidence 455777888999999999999999998775 47999999653 322110 1 11 279999987
Q ss_pred cC----------------------------eEEEeCCcEEEEeeeCCccCCcceeEEEEeCCCeeeEEeeeecCCceEE-
Q psy12724 73 MD----------------------------EHVLKGNSAVLKCHIPSFVADYVAVESWISDQGEELFVDMTESTDGKYL- 123 (167)
Q Consensus 73 ~~----------------------------~~v~~G~~a~l~C~~~~~~~~p~p~i~W~k~~~~~l~~~~~~~~~~r~~- 123 (167)
.| ..+.+|+++.|.|.+.+ .|.|.++|+||+ ..+.. +.++.
T Consensus 81 ~N~~g~~~~~~~l~v~~~~~~p~~~~~~~~~~~~~G~~v~l~C~~~g---~p~~~v~W~k~g-~~l~~------~~~~~~ 150 (570)
T 3b43_A 81 ENSVGAVASSAVLVIKERKLPPSFARKLKDVHETLGFPVAFECRING---SEPLQVSWYKDG-ELLKD------DANLQT 150 (570)
T ss_dssp EETTEEEEEEEEEEECCCCCCCEESSCCCCEEEETTSCEEEEEEEES---SSSCEEEEEETT-EECCC------CSSEEE
T ss_pred EeCCceEEEEEEEEECCCCCCCcccccCCCeEecCCCeEEEEEEEcc---CCCCEEEEEECC-EECcC------CCCEEE
Confidence 43 23456999999999984 588999999997 55532 22322
Q ss_pred --EccCCeEEEeecCcCCCCcceEEEeeecC
Q psy12724 124 --VLPSGELHIRDVGPEDGYKSYQCRTKHRL 152 (167)
Q Consensus 124 --~~~~g~L~I~~v~~~D~~G~Y~C~a~n~~ 152 (167)
....+.|.|.+++.+|+ |.|+|.|.|..
T Consensus 151 ~~~~~~~~L~i~~~~~~d~-G~Y~C~a~n~~ 180 (570)
T 3b43_A 151 SFIHNVATLQILQTDQSHV-GQYNCSASNPL 180 (570)
T ss_dssp EEETTEEEEEESSCCGGGC-EEEEEEEEETT
T ss_pred EEECCEEEEEECcCChHHC-EEEEEEEEeCC
Confidence 22346899999999999 99999999976
No 61
>1jbj_A CD3 epsilon and gamma ectodomain fragment complex; beta-sheet, C2-SET immunoglobulin superfamily, H-bonded G strand PAIR, single-chain; NMR {Mus musculus} SCOP: b.1.1.4 b.1.1.4 PDB: 1xmw_A
Probab=99.73 E-value=1.4e-17 Score=123.97 Aligned_cols=112 Identities=15% Similarity=0.275 Sum_probs=82.0
Q ss_pred EEEEeCCcEEEEeecCCCCCCcceeeEEeeCCCceeeecCCce------E---EEeeeEEEecCe---------------
Q psy12724 20 VFVIKGNAAVFKCNLPSFVSDHLDVVSWADTDGGQYQIDNQDF------V---VSQSYTVNIMDE--------------- 75 (167)
Q Consensus 20 ~~v~~G~~~~l~C~a~~~~~~~~~~i~W~k~~~~~~~~~~~~~------v---~~g~y~c~~~~~--------------- 75 (167)
..+..|+++.|.|.+.+ +. .|.|+|++. .+..+..+. + .+|.|+|.+.+.
T Consensus 9 ~v~~~G~~v~L~C~~~~-~~----~i~W~k~g~-~l~~~~~~~L~I~~~~~~~D~G~Y~C~a~n~~g~~~~~~~~~v~~~ 82 (186)
T 1jbj_A 9 KVSISGTSVELTCPLDS-DE----NLKWEKNGQ-ELPQKHDKHLVLQDFSEVEDSGYYVCYTPASNKNTYLYLKARVGSA 82 (186)
T ss_dssp EEEEETTEEEEECSSCC-CT----TCEEEETTE-EECSCCCSEEEEESCCTTTSCEEEEEECSSCCCCCCEEECCCCCSC
T ss_pred EEEeCCcEEEEEEeCCC-CC----ceEEEECCE-ECCCCCCCEEEECCCCccccCEEEEEEEEeCCCcEEEEEEEEEecc
Confidence 34588999999999987 33 299999854 443322221 1 279999987431
Q ss_pred --------------------------------EEE---eCCcEEEEeeeCCccCCcceeEEEEeCCCeeeEEeeeecCCc
Q psy12724 76 --------------------------------HVL---KGNSAVLKCHIPSFVADYVAVESWISDQGEELFVDMTESTDG 120 (167)
Q Consensus 76 --------------------------------~v~---~G~~a~l~C~~~~~~~~p~p~i~W~k~~~~~l~~~~~~~~~~ 120 (167)
.+. +|+++.|.|.+ |.|.++|+||+ ..+.. ..
T Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~v~l~C~~------p~p~i~W~k~g-~~i~~------~~ 149 (186)
T 1jbj_A 83 DDAKKDAAKKDDAKKDDAKKDGSQTNKAKNLVQVDGSRGDGSVLLTCGL------TDKTIKWLKDG-SIISP------LN 149 (186)
T ss_dssp CCCCCCCCCCCCCSCCSSSTTCCSCCCCSSCCEECCCSSSCEEEEECSS------SCSCEEEEETT-EECCC------SS
T ss_pred cccccccccccccccCCccccccccccccccccceecCCCCeEEEEeeC------CCCeEEEEECC-EECcc------cC
Confidence 012 89999999998 56789999998 45531 11
Q ss_pred eEEEccCCeEEEeecCcCCCCcceEEEeeecCcce
Q psy12724 121 KYLVLPSGELHIRDVGPEDGYKSYQCRTKHRLTGE 155 (167)
Q Consensus 121 r~~~~~~g~L~I~~v~~~D~~G~Y~C~a~n~~~~~ 155 (167)
+ .++.|.|.+++.+|+ |.|+|.|.|..+..
T Consensus 150 ~----~~~~L~i~~v~~~D~-G~Y~C~a~N~~g~~ 179 (186)
T 1jbj_A 150 A----TKNTWNLGNNAKDPR-GTYQCQGAKETSNP 179 (186)
T ss_dssp C----CSSCCEEEETTSCCE-EEEEEEESSCEEEE
T ss_pred C----CcceEEECCCCcCcC-EEEEEEEEcCcCCc
Confidence 1 467899999999999 99999999998544
No 62
>2fbo_J V1V2;, variable region-containing chitin-binding protein 3; immunoglobulin, VCBP, V-type, V SET, immune system; 1.85A {Branchiostoma floridae}
Probab=99.73 E-value=8.7e-18 Score=128.40 Aligned_cols=134 Identities=15% Similarity=0.143 Sum_probs=88.1
Q ss_pred eeEEeEEEEEeCCcEEEEeecCCCCCCcceeeEEeeCCCce----eee------------------------cC------
Q psy12724 14 EAQVYDVFVIKGNAAVFKCNLPSFVSDHLDVVSWADTDGGQ----YQI------------------------DN------ 59 (167)
Q Consensus 14 ~~~~~~~~v~~G~~~~l~C~a~~~~~~~~~~i~W~k~~~~~----~~~------------------------~~------ 59 (167)
...+.++.|.+|+++.|.|.+.+....+.+.+.|+|++... +.. ..
T Consensus 6 ~~~~~~v~v~~G~~v~L~C~~~~~~~~~~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~ 85 (250)
T 2fbo_J 6 RTTHTEVEVHAGGTVELPCSYQLANDTQPPVISWLKGASPDRSTKVFKGNYNWQGEGLGFVESDSYKESFGDFLGRASVA 85 (250)
T ss_dssp ECSCSEEEECTTSCEEECCEEEECSCCSCCEEEEEEEEETTEEEEEEEEEECCCBTTBCCCTTSEEEEECGGGTTTEECS
T ss_pred EcCCCceEEecCCeEEEEEEeEcCCCCCceEEEEEeCCCCCccEEEEeeccccccccccccccccccccCCCcCceEEec
Confidence 34556889999999999999976211223589999986331 111 00
Q ss_pred ---CceE--------EEeeeEEEecC----------------------------------eEEEeCCcEEEEeeeCCccC
Q psy12724 60 ---QDFV--------VSQSYTVNIMD----------------------------------EHVLKGNSAVLKCHIPSFVA 94 (167)
Q Consensus 60 ---~~~v--------~~g~y~c~~~~----------------------------------~~v~~G~~a~l~C~~~~~~~ 94 (167)
...+ .+|.|+|.+.+ ..+.+|+++.|.|.+.+
T Consensus 86 ~~~~~~L~I~~v~~~D~G~Y~C~~~~~~~~~~~~~~~~~~~l~V~~~~~~~~~~~~~~~~~~v~~g~~v~L~C~~~g--- 162 (250)
T 2fbo_J 86 NLAAPTLRLTHVHPQDGGRYWCQVAQWSIRTEFGLDAKSVVLKVTGHTPSNNVHVSTAEVVQVDEGNDITMTCPCTD--- 162 (250)
T ss_dssp CTTSCCEEECSCCGGGCEEEEEEEECTTCCSGGGEEEEEEEEEETTTSCCSCCEECCCSEEECCTTCCEEECCCEES---
T ss_pred cCCcceEEEeeCChhhCeEEEEEeccCccCCcccccceeEEEEEeccCCCCeEEEecCceEEecCCCcEEEEEEecC---
Confidence 0011 27999998743 11124999999999974
Q ss_pred CcceeEEEEeCCCeeeEEee------------------eecCCceEEEccCCeEEEeecCcCCCCcceEEEeeecC
Q psy12724 95 DYVAVESWISDQGEELFVDM------------------TESTDGKYLVLPSGELHIRDVGPEDGYKSYQCRTKHRL 152 (167)
Q Consensus 95 ~p~p~i~W~k~~~~~l~~~~------------------~~~~~~r~~~~~~g~L~I~~v~~~D~~G~Y~C~a~n~~ 152 (167)
.|.|.++|+|++ ..+.... ......+.....++.|.|.+++.+|+ |.|+|.|.|..
T Consensus 163 ~p~p~v~W~k~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~D~-G~Y~C~a~N~~ 236 (250)
T 2fbo_J 163 CANANVTWYTGP-TFFENYETGTYQPLANKNQFGITWFSSEIAGRASFSGARNLVIRAAKITDA-GRVWCELATGQ 236 (250)
T ss_dssp CTTCEEEEEEEE-ECSSCSSSCEEEEEEEECTTSCEEECTTTTTSEEEETTTEEEECSCCGGGC-EEEEEEEESSS
T ss_pred CCCCeeEEEeCC-CcccccccCcceeEeccCCCCccccCceEecccccCCccEEEEecCCcccC-EEEEEEecCCc
Confidence 488899999986 3432100 00001223332457999999999998 99999999954
No 63
>1bih_A Hemolin; insect immunity, LPS-binding, homophilic adhesion; 3.10A {Hyalophora cecropia} SCOP: b.1.1.4 b.1.1.4 b.1.1.4 b.1.1.4
Probab=99.73 E-value=3e-17 Score=133.21 Aligned_cols=119 Identities=17% Similarity=0.261 Sum_probs=91.3
Q ss_pred EeEEEEEeCCcEEEEeecCCCCCCcceeeEEeeCCCceeeec-C---------Cc-eE--------EEeeeEEEecC---
Q psy12724 17 VYDVFVIKGNAAVFKCNLPSFVSDHLDVVSWADTDGGQYQID-N---------QD-FV--------VSQSYTVNIMD--- 74 (167)
Q Consensus 17 ~~~~~v~~G~~~~l~C~a~~~~~~~~~~i~W~k~~~~~~~~~-~---------~~-~v--------~~g~y~c~~~~--- 74 (167)
+.+..+.+|+++.|.|.+.+.|.+ .+.|+|++. .+... . .. .+ ..|.|+|.+.+
T Consensus 219 ~~~~~~~~G~~v~l~C~~~g~p~~---~i~W~~~g~-~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~n~~g 294 (395)
T 1bih_A 219 SKDMMAKAGDVTMIYCMYGSNPMG---YPNYFKNGK-DVNGNPEDRITRHNRTSGKRLLFKTTLPEDEGVYTCEVDNGVG 294 (395)
T ss_dssp CCSEEEETTSCEEEEEEEECSSCC---CCEEEETTE-ECCCCTTSSEESCSSSTTSEEEESSCCGGGCEEEEEEECCSSS
T ss_pred CCceEEECCCcEEEEEEeccCCCC---eEEEEECCE-EcCCCCceeEEEEecCCCceEEEccCChhhCEEEEEEEEeCCC
Confidence 457789999999999999887754 699999853 33211 0 00 11 27999998743
Q ss_pred ------------------------eEEEeCCcEEEEeeeCCccCCcceeEEEEeCCCeeeEEeeeecCCceEEEccCCeE
Q psy12724 75 ------------------------EHVLKGNSAVLKCHIPSFVADYVAVESWISDQGEELFVDMTESTDGKYLVLPSGEL 130 (167)
Q Consensus 75 ------------------------~~v~~G~~a~l~C~~~~~~~~p~p~i~W~k~~~~~l~~~~~~~~~~r~~~~~~g~L 130 (167)
..+.+|+++.|.|.+.+ .|.|.++|+|++ ..+. .+|+.+. ++.|
T Consensus 295 ~~~~~~~~l~V~~~P~~~~~~~~~~~~~~g~~~~l~C~~~g---~p~p~v~W~~~g-~~~~-------~~~~~~~-~~~L 362 (395)
T 1bih_A 295 KPQKHSLKLTVVSAPKYEQKPEKVIVVKQGQDVTIPCKVTG---LPAPNVVWSHNA-KPLS-------GGRATVT-DSGL 362 (395)
T ss_dssp SCEEEEEEEEEEEEEEEEECCCSEEEECTTSCEEEECEEEE---ESCCCCEEEETT-EECC-------SSSEEEE-TTEE
T ss_pred CceEEEEEEEEEcCCccccCCCcceEecCCCeEEEEEEECc---ccCCeeEEEECC-EECC-------CCceEEE-CCEE
Confidence 23467999999999974 588999999997 4542 3466654 5699
Q ss_pred EEeecCcCCCCcceEEEeeecC
Q psy12724 131 HIRDVGPEDGYKSYQCRTKHRL 152 (167)
Q Consensus 131 ~I~~v~~~D~~G~Y~C~a~n~~ 152 (167)
.|.+++.+|+ |.|+|.|.|..
T Consensus 363 ~i~~~~~~d~-G~Y~C~a~N~~ 383 (395)
T 1bih_A 363 VIKGVKNGDK-GYYGCRATNEH 383 (395)
T ss_dssp EESSCCSTTC-EEEEEEEEETT
T ss_pred EEeeCCcccC-EEEEEEEEccC
Confidence 9999999999 99999999987
No 64
>3o4o_C Interleukin-1 receptor type 2; cytokine-receptor complex, beta-trefoil, IG-like fold, immun; HET: NAG; 3.30A {Homo sapiens}
Probab=99.73 E-value=1.1e-17 Score=133.69 Aligned_cols=132 Identities=18% Similarity=0.261 Sum_probs=98.3
Q ss_pred eceeeEEeEEEEEeCCcEEEEeecC-------CCCCCcceeeEEeeCCCceeeecC--Cc------eE--------EEee
Q psy12724 11 QYYEAQVYDVFVIKGNAAVFKCNLP-------SFVSDHLDVVSWADTDGGQYQIDN--QD------FV--------VSQS 67 (167)
Q Consensus 11 ~~~~~~~~~~~v~~G~~~~l~C~a~-------~~~~~~~~~i~W~k~~~~~~~~~~--~~------~v--------~~g~ 67 (167)
+.|...+++..|.+|+++.|.|.+. +.+. +.+.|+|++.....+.. .+ .+ ..|.
T Consensus 19 p~~~~~~~~~~v~~G~~v~L~C~~~~~~~~~~~~p~---~~v~W~k~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~D~G~ 95 (339)
T 3o4o_C 19 RFRGRHYKREFRLEGEPVALRCPQVPYWLWASVSPR---INLTWHKNDSARTVPGEEETRMWAQDGALWLLPALQEDSGT 95 (339)
T ss_dssp EEEEECSCCEEEETTBCCEEECTTSCSSCCSTTSSC---CBCCCEESSCCSCCSCCSSSCEEEETTEEEESSBCTTCCEE
T ss_pred HhhCcCceEEEEECCccEEEEeccccccccccCCCC---ceEEEEECCCCcccCccccccEEeeCCeEEECCCCcccCEE
Confidence 5688899999999999999999998 5443 47999998764222211 11 11 2799
Q ss_pred eEEEecC---------------------------eEEEeCCcEEEEeeeCC--ccCCcceeEEEEeCCCeeeEEeeeecC
Q psy12724 68 YTVNIMD---------------------------EHVLKGNSAVLKCHIPS--FVADYVAVESWISDQGEELFVDMTEST 118 (167)
Q Consensus 68 y~c~~~~---------------------------~~v~~G~~a~l~C~~~~--~~~~p~p~i~W~k~~~~~l~~~~~~~~ 118 (167)
|+|.+.+ ..+.+|+++.|.|.+.. ..+.|.|.++|+||+ ..+. ..
T Consensus 96 Y~C~~~n~~g~~~~~~~l~V~~~~~~~~~~~~~~~~~~~g~~v~l~C~~~~~~~~g~p~~~v~W~k~g-~~~~-----~~ 169 (339)
T 3o4o_C 96 YVCTTRNASYCDKMSIELRVFENTDAFLPFISYPQILTLSTSGVLVCPDLSEFTRDKTDVKIQWYKDS-LLLD-----KD 169 (339)
T ss_dssp EECCEEETTEEEEEEEEEEEECSCGGGHHHHCEEEEEETTSCEEEECCSCTTTCCSSSCCCBCCEESS-CBCC-----TT
T ss_pred EEEEEECCcceEEEEEEEEEEcCCCccccccccceEEECCCCEEEEecCCcccccCCCCceEEEecCC-eeCC-----CC
Confidence 9998632 34578999999999421 015689999999997 4553 23
Q ss_pred CceEEEccC-CeEEEeecCcCCCCcceEEEeeecC
Q psy12724 119 DGKYLVLPS-GELHIRDVGPEDGYKSYQCRTKHRL 152 (167)
Q Consensus 119 ~~r~~~~~~-g~L~I~~v~~~D~~G~Y~C~a~n~~ 152 (167)
..++.+..+ +.|.|.+++.+|+ |.|+|.|.|..
T Consensus 170 ~~~~~~~~~~~~L~i~~v~~~d~-G~Y~C~a~n~~ 203 (339)
T 3o4o_C 170 NEKFLSVRGTTHLLVHDVALEDA-GYYRCVLTFAH 203 (339)
T ss_dssp CSSEEECTTSSEEEESSCCGGGC-EEEEEEEECCB
T ss_pred CceeEEcCCcceEEEcccCHhhC-eEEEEEEEECC
Confidence 467777654 5899999999999 99999999865
No 65
>2v5m_A Dscam; neurobiology SPL immunoglobulin domain, cell adhesion, membrane, development protein; HET: NAG; 1.95A {Drosophila melanogaster} PDB: 2v5s_A* 2v5r_A*
Probab=99.72 E-value=7.1e-17 Score=130.88 Aligned_cols=138 Identities=28% Similarity=0.446 Sum_probs=99.2
Q ss_pred EeeeceeeEEeEEEEEeCCcEEEEeecCCCCCCcceeeEEeeCCCceeeec------------CCceE------EE-eee
Q psy12724 8 VISQYYEAQVYDVFVIKGNAAVFKCNLPSFVSDHLDVVSWADTDGGQYQID------------NQDFV------VS-QSY 68 (167)
Q Consensus 8 v~~~~~~~~~~~~~v~~G~~~~l~C~a~~~~~~~~~~i~W~k~~~~~~~~~------------~~~~v------~~-g~y 68 (167)
.+.+.|...+.+..+.+|+++.|.|.+.+.++++.+.+.|++++....... +...+ .. |.|
T Consensus 101 ~~~p~~~~~~~~~~v~~G~~v~l~C~~~~~~~~~~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~~G~Y 180 (388)
T 2v5m_A 101 VVAQYYEADVNKEHVIRGNSAVIKCLIPSFVADFVEVVSWHTDEEENYFPGAEYDGKYLVLPSGELHIREVGPEDGYKSY 180 (388)
T ss_dssp ECCCCCCCBCCCEEEETTSCEEECCBCCTTTTTTEEEEEEEETTCCEECSSSCBTTTEEECTTSCEEESSCCGGGGGCCE
T ss_pred ccccccccCccceeeecCCcEEEEEECcCCCCCCcceEEEEeCCCcccccccCCCCcEEEccCCcEEEecCCccccCeeE
Confidence 344567777888899999999999999988765567899999976543221 11111 14 999
Q ss_pred EEEecC-----------------------------------eEEEeCCcEEEEeeeCCccCCcceeEEEEeCCCeee-EE
Q psy12724 69 TVNIMD-----------------------------------EHVLKGNSAVLKCHIPSFVADYVAVESWISDQGEEL-FV 112 (167)
Q Consensus 69 ~c~~~~-----------------------------------~~v~~G~~a~l~C~~~~~~~~p~p~i~W~k~~~~~l-~~ 112 (167)
+|.+.+ ..+.+|+++.|.|.+.+ .|.|.++|+|++.... ..
T Consensus 181 ~C~~~n~~~~~~~~~~~~~~l~v~~~~~~~~p~~~~~~~~~~~v~~G~~v~l~C~~~g---~p~p~v~W~~~~~~~~~~~ 257 (388)
T 2v5m_A 181 QCRTKHRLTGETRLSATKGRLVITEPISSSAPRTPALVQKPLELMVAHTISLLCPAQG---FPAPSFRWYKFIEGTTRKQ 257 (388)
T ss_dssp EEEEEETTTCCEEECSSCBCEEEECCCSCEEEECCSSCCCCEEEETTSCEEECCCCEE---ESCCEEEEEEECTTSSCEE
T ss_pred EEEeccCCCCceeeccccceEEEecCCcCCCCcCccccCCceEEeeCCcEEEEEECCC---CCCCEEEEEecCCCCcccc
Confidence 998732 13456999999999874 5889999999752111 11
Q ss_pred eeeecCCceEEEccCCeEEEeecCcCCCCcceEEEeeecC
Q psy12724 113 DMTESTDGKYLVLPSGELHIRDVGPEDGYKSYQCRTKHRL 152 (167)
Q Consensus 113 ~~~~~~~~r~~~~~~g~L~I~~v~~~D~~G~Y~C~a~n~~ 152 (167)
.. ....++. ..++.|.|.+++.+|+ |.|+|.|.|..
T Consensus 258 ~~--~~~~~~~-~~~~~L~i~~v~~~d~-G~Y~C~a~n~~ 293 (388)
T 2v5m_A 258 AV--VLNDRVK-QVSGTLIIKDAVVEDS-GKYLCVVNNSV 293 (388)
T ss_dssp EC--CCSSSEE-EETTEEEESSCCGGGC-EEEEEEEECSS
T ss_pred cc--cccCcee-cccCEEEECcCCHHHC-eEEEEEEecCC
Confidence 11 1234443 3478999999999999 99999999987
No 66
>1wio_A CD4, T-cell surface glycoprotein CD4; immunoglobulin fold, transmembrane, MHC lipoprotein, polymorphism; 3.90A {Homo sapiens} SCOP: b.1.1.1 b.1.1.1 b.1.1.3 b.1.1.3 PDB: 1wip_A 1wiq_A 3t0e_E
Probab=99.72 E-value=1.2e-16 Score=129.42 Aligned_cols=127 Identities=13% Similarity=0.074 Sum_probs=89.4
Q ss_pred EEEEeCCcEEEEeecCCCCCCcceeeEEeeCCCceeeecCCceE------EEeeeEEEecC-------------------
Q psy12724 20 VFVIKGNAAVFKCNLPSFVSDHLDVVSWADTDGGQYQIDNQDFV------VSQSYTVNIMD------------------- 74 (167)
Q Consensus 20 ~~v~~G~~~~l~C~a~~~~~~~~~~i~W~k~~~~~~~~~~~~~v------~~g~y~c~~~~------------------- 74 (167)
..+.+|+++.|.|.+.+.|. |.+.|+|+++.....+....+ ..|.|+|.+.+
T Consensus 106 ~~v~~G~~v~l~C~~~~~p~---~~v~W~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~~~~~~~~~~~~l~v~~~p~~ 182 (363)
T 1wio_A 106 THLLQGQSLTLTLESPPGSS---PSVQCRSPRGKNIQGGKTLSVSQLELQDSGTWTCTVLQNQKKVEFKIDIVVLAFQKA 182 (363)
T ss_dssp SSEESBSCEEEEEECCTTCC---CCEEEECSSSCEEEESSEEEECSBCGGGCEECEEEEEETTEEEEECCEECEECCSCS
T ss_pred eEEecCCCEEEEEEcCCCCC---CeEEEEcCCCcccccceEEEEeeCChhcCCEEEEEEecCCCeEEEEEEEEEecCCCC
Confidence 35789999999999988654 479999997654432222211 27999998632
Q ss_pred ---eEEEeCCcEEEEeeeCCcc-C-CcceeEEEEeCCCeeeEEee--eecCCceEEEc-----------cC--CeEEEee
Q psy12724 75 ---EHVLKGNSAVLKCHIPSFV-A-DYVAVESWISDQGEELFVDM--TESTDGKYLVL-----------PS--GELHIRD 134 (167)
Q Consensus 75 ---~~v~~G~~a~l~C~~~~~~-~-~p~p~i~W~k~~~~~l~~~~--~~~~~~r~~~~-----------~~--g~L~I~~ 134 (167)
..+.+|+++.|.|.+.+.. + .|.|.++|+|++ ..+.+.. ....++++.+. .+ +.|.|.+
T Consensus 183 ~~~~~~~~G~~v~l~C~~~~~~~~~~P~p~i~W~~~g-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~ 261 (363)
T 1wio_A 183 SSIVYKKEGEQVEFSFPLAFTVEKLTGSGELWWQAER-ASSSKSWITFDLKNKEVSVKRVTQDPKLQMGKKLPLHLTLPQ 261 (363)
T ss_dssp EEEEEEETBCCEEEECCCCCCCCSSCEEEEEEEEESS-CCCCCCEEEEEECSSCEEEEEEECSSCCBCCSSSSCEEEESS
T ss_pred CCceEEecCCEEEEEEEEecccccCCCceeEEEecCC-CCccceEEEEEecCCeeeccccccchhhhcccCCceEEEEcc
Confidence 2356799999999886410 1 589999999997 3442100 00014455442 33 3899999
Q ss_pred cCcCCCCcceEEEeeec
Q psy12724 135 VGPEDGYKSYQCRTKHR 151 (167)
Q Consensus 135 v~~~D~~G~Y~C~a~n~ 151 (167)
++.+|+ |.|+|.|.|.
T Consensus 262 v~~~d~-G~Y~C~a~n~ 277 (363)
T 1wio_A 262 ALPQYA-GSGNLTLALE 277 (363)
T ss_dssp BCGGGC-EEEEEEECBT
T ss_pred CCcCcC-cEEEEEEEEh
Confidence 999999 9999999999
No 67
>1nbq_A JAM, junctional adhesion molecule 1, PAM-1; reovirus receptor, tight junction formation, immunoglobulin superfamily, immune system; 2.90A {Homo sapiens} SCOP: b.1.1.1 b.1.1.4 PDB: 3eoy_G
Probab=99.72 E-value=9e-18 Score=124.67 Aligned_cols=134 Identities=19% Similarity=0.329 Sum_probs=95.2
Q ss_pred ceeeEEeEEEEEeCCcEEEEeecCCCCCCcceeeEEeeCCCceee---------e-cCCc------eE--------EEee
Q psy12724 12 YYEAQVYDVFVIKGNAAVFKCNLPSFVSDHLDVVSWADTDGGQYQ---------I-DNQD------FV--------VSQS 67 (167)
Q Consensus 12 ~~~~~~~~~~v~~G~~~~l~C~a~~~~~~~~~~i~W~k~~~~~~~---------~-~~~~------~v--------~~g~ 67 (167)
.+...+.+..+.+|+++.|.|.+.+.+. +.+.|+|++..... . ...+ .+ ..|.
T Consensus 6 ~i~~~~~~~~v~~G~~v~L~C~~~~~p~---~~v~W~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~L~i~~~~~~d~G~ 82 (209)
T 1nbq_A 6 TVHSSEPEVRIPENNPVKLSCAYSGFSS---PRVEWKFDQGDTTRLVCYNNKITASYEDRVTFLPTGITFKSVTREDTGT 82 (209)
T ss_dssp EEECSCSBCCEETTCCCEEECEEESCSS---EEEEEEEEETTEEEESEETTEECTTTTTTCEEETTEEECSCCCTTSCSE
T ss_pred EEEcCCCceEEEcCCCEEEEEEEeCCCC---cEEEEEEcCCceeEEEEecCccCccccCceEeeccEEEEeeCCHHHCcE
Confidence 4566788889999999999999987754 57999998664211 0 0111 11 2799
Q ss_pred eEEEecC---------------------------eEEEeCCcEEEEeee-CCccCCcceeEEEEeCCCeeeEEeee---e
Q psy12724 68 YTVNIMD---------------------------EHVLKGNSAVLKCHI-PSFVADYVAVESWISDQGEELFVDMT---E 116 (167)
Q Consensus 68 y~c~~~~---------------------------~~v~~G~~a~l~C~~-~~~~~~p~p~i~W~k~~~~~l~~~~~---~ 116 (167)
|+|.+.+ ..+.+|+++.|.|.+ . +.|.|.++|+|++ ..+..... .
T Consensus 83 Y~C~~~~~~g~~~~~~~~~l~V~~~p~~~~~~~~~~~~~g~~~~l~C~~~~---~~p~~~v~W~~~~-~~~~~~~~~~~~ 158 (209)
T 1nbq_A 83 YTCMVSEEGGNSYGEVKVKLIVLVPPSKPTVNIPSSATIGNRAVLTCSEQD---GSPPSEYTWFKDG-IVMPTNPKSTRA 158 (209)
T ss_dssp EEEEEEETTSSCEECCEEECCEEBCCCCCCCCCBSEEETTSCEEECCCCCS---CBSCCEEEEEETT-CCCCSCSSSSSS
T ss_pred EEEEEecCCCCccceEEEEEEEecCCcCCCcccccceecCCEEEEEEeCCC---CCCCceeEEEECC-eeCCCcccccee
Confidence 9998642 235789999999997 5 4589999999997 45432100 0
Q ss_pred cCCceEEEc-cCCeEEEeecCcCCCCcceEEEeeecCc
Q psy12724 117 STDGKYLVL-PSGELHIRDVGPEDGYKSYQCRTKHRLT 153 (167)
Q Consensus 117 ~~~~r~~~~-~~g~L~I~~v~~~D~~G~Y~C~a~n~~~ 153 (167)
....++.+. .++.|.|.+++.+|+ |.|+|.|.|...
T Consensus 159 ~~~~~~~~~~~~~~L~i~~~~~~d~-G~Y~C~a~n~~g 195 (209)
T 1nbq_A 159 FSNSSYVLNPTTGELVFDPLSASDT-GEYSCEARNGYG 195 (209)
T ss_dssp CTTCCCCCCTTTCCEEESSCCGGGC-CCEEEEEECSSS
T ss_pred eeccceEEcCCcceEEEEeccccCC-eEEEEEEeCCcC
Confidence 001334333 457899999999998 999999999873
No 68
>3bp6_B Programmed cell death 1 ligand 2; PD-1, PD-L2, complex, costimulation, glycoprotein, immunoglo domain, membrane, transmembrane, receptor; 1.60A {Mus musculus} PDB: 3bp5_B 3rnq_B 3bov_A 3rnk_B
Probab=99.72 E-value=1e-16 Score=119.37 Aligned_cols=124 Identities=13% Similarity=0.134 Sum_probs=85.0
Q ss_pred EEeEEEEEeCCcEEEEeecCCCCC--CcceeeEEeeCCCceeee--------c----CCceE--------EEeeeEEEec
Q psy12724 16 QVYDVFVIKGNAAVFKCNLPSFVS--DHLDVVSWADTDGGQYQI--------D----NQDFV--------VSQSYTVNIM 73 (167)
Q Consensus 16 ~~~~~~v~~G~~~~l~C~a~~~~~--~~~~~i~W~k~~~~~~~~--------~----~~~~v--------~~g~y~c~~~ 73 (167)
.++.+.+.+|+++.|.|.+.+.+. ...+.+.|+|+++..... + +...+ .+|.|+|.+.
T Consensus 8 p~~~v~v~~G~~v~L~C~~~~~p~~~~~~~~v~W~k~~~~~~~~~~r~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~~~ 87 (202)
T 3bp6_B 8 PKEVYTVDVGSSVSLECDFDRRECTELEGIRASLQKVENDTSLQSERATLLEEQLPLGKALFHIPSVQVRDSGQYRCLVI 87 (202)
T ss_dssp SCSEEEEETTSCEEEEEEECTTC---CTTEEEEEEECC--CCCBCSSCEECGGGGGGTEEEEEECSCCGGGCEEEEEEEE
T ss_pred CCcCEEEeCCCcEEEEEEecCCCCCCccceEEEEEcCCCcccccCCceEEeeccccCCeeEEEECCCCHHHCcEEEEEEE
Confidence 445688999999999999988763 112579999943332211 1 00111 2799999873
Q ss_pred C---------------------e---EEEeCCcEEEEeeeCCccCCcceeEEEEeCCCeeeEEeeeecCCceEEEccCC-
Q psy12724 74 D---------------------E---HVLKGNSAVLKCHIPSFVADYVAVESWISDQGEELFVDMTESTDGKYLVLPSG- 128 (167)
Q Consensus 74 ~---------------------~---~v~~G~~a~l~C~~~~~~~~p~p~i~W~k~~~~~l~~~~~~~~~~r~~~~~~g- 128 (167)
+ . .+.+|+++.|.|.+.+ .|.|.++|+|++. .+.. .+....+|
T Consensus 88 ~~~~~~~~~~~l~V~~~~~~p~~~~~~~~~g~~v~l~C~~~g---~P~p~v~W~~~~~-~~~~--------~~~~~~~~~ 155 (202)
T 3bp6_B 88 CGAAWDYKYLTVKVKASYMRIDTRILEVPGTGEVQLTCQARG---YPLAEVSWQNVSV-PANT--------SHIRTPEGL 155 (202)
T ss_dssp ETTEEEEEEEEEEEEBCCCCEEEEEEECTTTCCEEEEEEEEE---BSCCEEEETTCCS-CCEE--------EEEECTTSC
T ss_pred eCCCcceEEEEEEecCCCCcccEEEEecCCCCeEEEEEEccc---cCCceEEEEeCCC-CccC--------ceeeCCCCC
Confidence 2 0 1236999999999974 5999999999874 4322 12223334
Q ss_pred --eEEEeecCcCCCCcceEEEeeecC
Q psy12724 129 --ELHIRDVGPEDGYKSYQCRTKHRL 152 (167)
Q Consensus 129 --~L~I~~v~~~D~~G~Y~C~a~n~~ 152 (167)
.|.|.+++.+|+ |.|+|.|.|..
T Consensus 156 ~~~~~i~~v~~~d~-G~Y~C~a~N~~ 180 (202)
T 3bp6_B 156 YQVTSVLRLKPQPS-RNFSCMFWNAH 180 (202)
T ss_dssp EEEEEEEEECCCTT-CCEEEEEEETT
T ss_pred EEEEEEEEEEcCCC-CEEEEEEEcCC
Confidence 366889999998 99999999987
No 69
>1sy6_A T-cell surface glycoprotein CD3 gamma/epsilon chain; CD3 epsilon, OKT3 FAB, signaling protein/antibiotic complex; 2.10A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 PDB: 2atp_E*
Probab=99.71 E-value=2.4e-17 Score=124.81 Aligned_cols=118 Identities=13% Similarity=0.217 Sum_probs=83.0
Q ss_pred eEEEE-EeCCcEEEEeecCCCCCCcceeeEEeeCCCceeeec----CCceE------EEeeeEEEecC------------
Q psy12724 18 YDVFV-IKGNAAVFKCNLPSFVSDHLDVVSWADTDGGQYQID----NQDFV------VSQSYTVNIMD------------ 74 (167)
Q Consensus 18 ~~~~v-~~G~~~~l~C~a~~~~~~~~~~i~W~k~~~~~~~~~----~~~~v------~~g~y~c~~~~------------ 74 (167)
.++.+ .+|+++.|.|.+ +. +.++|+|++. .+... +...+ .+|.|+|.+.+
T Consensus 10 ~~~~~~~~G~~v~L~C~~---p~---~~i~W~k~g~-~l~~~~~~~~~L~i~~v~~~DsG~Y~C~~~~~~s~~~~v~v~~ 82 (204)
T 1sy6_A 10 VKVYDYQEDGSVLLTCDA---EA---KNITWFKDGK-MIGFLTEDKKKWNLGSNAKDPRGMYQCKGSQNKSKPLQVYYRM 82 (204)
T ss_dssp EEECCCCSSSEEEEEECS---CS---SEEEEEETTE-EEEEEESSCCCEEEEEGGGCCEEEEEEESSSSCCCCEEEEEEC
T ss_pred eeEEeecCCCeEEEEEcC---CC---CEEEEEECCE-ECCCCCCCCCeEEeCCCCcCCCEEEEEEecCCCCeeEEEEEEE
Confidence 34444 589999999999 22 4799999854 44321 11112 37999997532
Q ss_pred ---------------------------------------eEEE-eCCcEEEEeeeCCccCCcceeEEEEeCCCeeeEEee
Q psy12724 75 ---------------------------------------EHVL-KGNSAVLKCHIPSFVADYVAVESWISDQGEELFVDM 114 (167)
Q Consensus 75 ---------------------------------------~~v~-~G~~a~l~C~~~~~~~~p~p~i~W~k~~~~~l~~~~ 114 (167)
..+. +|+++.|.|.. .|.|.++|+|++ ..+..
T Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~v~~~G~~v~L~C~g-----~p~p~i~W~k~~-~~l~~-- 154 (204)
T 1sy6_A 83 GSADDAKKDAAKKDDAKKDDAKKDGSDGNEEMGGITQTPYKVSISGTTVILTCPQ-----YPGSEILWQHND-KNIGG-- 154 (204)
T ss_dssp ------------------------------------CCCCEEEEETTEEEEECSC-----CCSSCEEEEETT-EEESC--
T ss_pred eccccccccccccccccccccccccccccccccceecCCceeeecCCcEEEEcCC-----CCCCceEEEECC-EECCC--
Confidence 0123 89999999993 378889999997 45421
Q ss_pred eecCCceEEEccCCeEEEeec-CcCCCCcceEEEeeecCc
Q psy12724 115 TESTDGKYLVLPSGELHIRDV-GPEDGYKSYQCRTKHRLT 153 (167)
Q Consensus 115 ~~~~~~r~~~~~~g~L~I~~v-~~~D~~G~Y~C~a~n~~~ 153 (167)
..+.+.....++.|.|.++ +.+|+ |.|+|.|.|...
T Consensus 155 --~~~~~~~~~~~~~L~I~~v~~~~D~-G~Y~C~A~N~~g 191 (204)
T 1sy6_A 155 --DEDDKNIGSDEDHLSLKEFSELEQS-GYYVCYPRGSKP 191 (204)
T ss_dssp --CTTCTTEEEETTEEEETTCCHHHHC-EEEEEEETTSCG
T ss_pred --ccCCceEecCCCEEEEeeCCccccC-EEEEEEeccCCC
Confidence 1122333335899999999 99999 999999999884
No 70
>3ojm_B Fibroblast growth factor receptor 2; beta trefoil motif, immunoglobulin-like domain, growth facto factor receptor, extracellular; 2.10A {Homo sapiens} PDB: 1nun_B* 3oj2_C 2fdb_P 1iil_E 1ev2_E 1e0o_B* 1ii4_E 1djs_A 3ojv_C* 1cvs_C 1fq9_C* 1evt_C
Probab=99.71 E-value=8e-17 Score=121.25 Aligned_cols=130 Identities=15% Similarity=0.232 Sum_probs=90.7
Q ss_pred eEEEEEeCCcEEEEeecCCCCCCcceeeEEeeCCCceeeecCC----------ceE--------EEeeeEEEecC-----
Q psy12724 18 YDVFVIKGNAAVFKCNLPSFVSDHLDVVSWADTDGGQYQIDNQ----------DFV--------VSQSYTVNIMD----- 74 (167)
Q Consensus 18 ~~~~v~~G~~~~l~C~a~~~~~~~~~~i~W~k~~~~~~~~~~~----------~~v--------~~g~y~c~~~~----- 74 (167)
....|.+|+++.|.|.+.+.+. +.+.|+|++. .+..... ..+ ..|.|+|.+.+
T Consensus 27 ~~~~v~~G~~v~L~C~~~~~p~---~~v~W~~~~~-~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~~~n~~~~~ 102 (231)
T 3ojm_B 27 RLHAVPAANTVKFRCPAGGNPM---PTMRWLKNGK-EFKQEHRIGGYKVRNQHWSLIMESVVPSDKGNYTCVVENEYGSI 102 (231)
T ss_dssp SCEEEETTSCEEEECCEEEESC---CEEEEEETTE-ECCGGGSTTCCEEEGGGTEEEECSCCGGGCEEEEEEEEETTEEE
T ss_pred eeEEEccCCCEEEEEecccCCC---CeEEEEECCc-cccccccccceeeecCcceEEEecCCcccCEEEEEEEecccCcc
Confidence 7889999999999999988765 3799999854 3322110 011 27999997632
Q ss_pred -------------------------eEEEeCCcEEEEeeeCCccCCcceeEEEEe----CCCeeeEEeeeecCCceEE--
Q psy12724 75 -------------------------EHVLKGNSAVLKCHIPSFVADYVAVESWIS----DQGEELFVDMTESTDGKYL-- 123 (167)
Q Consensus 75 -------------------------~~v~~G~~a~l~C~~~~~~~~p~p~i~W~k----~~~~~l~~~~~~~~~~r~~-- 123 (167)
..+.+|+++.|.|.+.+ .|.|.++|+| ++ ..+... ......
T Consensus 103 ~~~~~l~V~~~~~~~p~~~~~~~~~~~~~~g~~~~l~C~~~~---~p~p~v~W~~~~~~~g-~~~~~~----~~~~~~~~ 174 (231)
T 3ojm_B 103 NHTYHLDVVERSRHRPILQAGLPANASTVVGGDVEFVCKVYS---DAQPHIQWIKHVEKNG-SKYGPD----GLPYLKVL 174 (231)
T ss_dssp EEEEEEEEECCCCCCCEECTTCSCCEEEETTCCEEEECCEEC---SSCCEEEEEEECCBTT-BSBCTT----SCBCEEEE
T ss_pred cccEEEEEEcCCCCCCceeeccCCceEEEeCCcEEEEEEEec---CCCCEEEEEECCCCCC-ccccCC----CcceEeEe
Confidence 34567999999999974 5888999999 54 343211 111111
Q ss_pred ------EccCCeEEEeecCcCCCCcceEEEeeecC---cceEEEee
Q psy12724 124 ------VLPSGELHIRDVGPEDGYKSYQCRTKHRL---TGETRLSA 160 (167)
Q Consensus 124 ------~~~~g~L~I~~v~~~D~~G~Y~C~a~n~~---~~~~~l~~ 160 (167)
...++.|.|.+++.+|+ |.|+|.|.|.. +..+.|.+
T Consensus 175 ~~~~~~~~~~~~L~i~~~~~~d~-G~Y~C~a~n~~g~~~~~~~l~V 219 (231)
T 3ojm_B 175 KHSGINSSNAEVLALFNVTEADA-GEYICKVSNYIGQANQSAWLTV 219 (231)
T ss_dssp EECSTTCSCTTEEEECSCCGGGC-EEEEEEEEETTEEEEEEEEEEE
T ss_pred cccccccCCccEEEEecCCHHHC-eEEEEEEEeccceEeeEEEEEE
Confidence 12345799999999998 99999999987 33344444
No 71
>2ifg_A High affinity nerve growth factor receptor; TRK, TRKA, receptor-ligand complex transferase; HET: NAG NDG MAN BMA; 3.40A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 c.10.2.7
Probab=99.71 E-value=9.6e-18 Score=135.82 Aligned_cols=131 Identities=11% Similarity=0.090 Sum_probs=95.0
Q ss_pred eeceeeEEeEEEEEeCCcEEEEeecCCCCCCcceeeEEeeCCCceeeecCC------ceE--------EEe-eeEEEecC
Q psy12724 10 SQYYEAQVYDVFVIKGNAAVFKCNLPSFVSDHLDVVSWADTDGGQYQIDNQ------DFV--------VSQ-SYTVNIMD 74 (167)
Q Consensus 10 ~~~~~~~~~~~~v~~G~~~~l~C~a~~~~~~~~~~i~W~k~~~~~~~~~~~------~~v--------~~g-~y~c~~~~ 74 (167)
.+.+...+.+..+.+|+++.|.|.+.+.|.+ .+.|.++++........ ..+ ..| .|+|.+.+
T Consensus 158 ~P~i~~~~~~~~v~~G~~v~L~C~~~g~p~p---~i~W~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~D~G~~Y~C~a~n 234 (347)
T 2ifg_A 158 VPTLKVQVPNASVDVGDDVLLRCQVEGRGLE---QAGWILTELEQSATVMKSGGLPSLGLTLANVTSDLNRKNVTCWAEN 234 (347)
T ss_dssp CCEEEEECCSSCCBTTCCEEEEEEEECSSCC---CCCEEESCCCSSEEECCCCCSSEEEEEEESCCSTTTTCCEEECCEE
T ss_pred CCceeccCCceEEeCCCcEEEEEEEecCCCC---EEEEEcCCceeecccccceecccceEEEeeCChHHCCCeEEEEEEc
Confidence 3457777888899999999999999887754 79999997653322110 011 269 99998643
Q ss_pred e---------------------EEEeCCcEEEEeeeCCccCCcceeEEEEeCCCeeeEEeeeecCCceEEEc--------
Q psy12724 75 E---------------------HVLKGNSAVLKCHIPSFVADYVAVESWISDQGEELFVDMTESTDGKYLVL-------- 125 (167)
Q Consensus 75 ~---------------------~v~~G~~a~l~C~~~~~~~~p~p~i~W~k~~~~~l~~~~~~~~~~r~~~~-------- 125 (167)
. .+.+|+++.|.|.+.| .|.|.++|+|++ ..+... ...+..+.
T Consensus 235 ~~g~~~~~~~l~V~~~P~i~~~~~~~g~~v~l~C~~~g---~P~p~i~W~~~g-~~l~~~----~~~~~~~~~~~~~~~~ 306 (347)
T 2ifg_A 235 DVGRAEVSVQVNVSFPASVQLHTAVEMHHWCIPFSVDG---QPAPSLRWLFNG-SVLNET----SFIFTEFLEPAANETV 306 (347)
T ss_dssp TTEECCEEECCCCBEEEEEEECCCEESSSEEEEEEEEE---ESCCEEEEEETT-EECCCC----SSEEEEECCCCTTCCC
T ss_pred CCCCEEEEEEEEEcCCCeeeeccCccCceEEEEEEeee---cCCCcEEEEeCC-EECCCC----cceeeEEEeecCCCcc
Confidence 1 1246999999999985 499999999997 455311 11111122
Q ss_pred cCCeEEEeecCcCCCCcceEEEeeecC
Q psy12724 126 PSGELHIRDVGPEDGYKSYQCRTKHRL 152 (167)
Q Consensus 126 ~~g~L~I~~v~~~D~~G~Y~C~a~n~~ 152 (167)
.+|.|.|.+++.+|+ |.|+|.|.|..
T Consensus 307 ~~~~L~I~~v~~~d~-G~Y~C~a~N~~ 332 (347)
T 2ifg_A 307 RHGCLRLNQPTHVNN-GNYTLLAANPF 332 (347)
T ss_dssp EEEEEEESSCCGGGC-EEEEEEEEETT
T ss_pred cceEEEECCCCcccC-ceEEEEEecCC
Confidence 256799999999999 99999999987
No 72
>4fmk_A Poliovirus receptor-related protein 2; immunoglobulin-like domain, IG domain, viral entry receptor, adhesion; HET: NAG BMA MAN FUC; 2.56A {Mus musculus} PDB: 4fn0_A* 4fs0_A*
Probab=99.70 E-value=9e-17 Score=119.68 Aligned_cols=131 Identities=21% Similarity=0.274 Sum_probs=87.8
Q ss_pred EeEEEEEeCCcEEEEeecCCCCCCcceeeEEeeCCCceeeec---------------------------------CCceE
Q psy12724 17 VYDVFVIKGNAAVFKCNLPSFVSDHLDVVSWADTDGGQYQID---------------------------------NQDFV 63 (167)
Q Consensus 17 ~~~~~v~~G~~~~l~C~a~~~~~~~~~~i~W~k~~~~~~~~~---------------------------------~~~~v 63 (167)
|.++.+..|+++.|.|.+.+.+.+.+..|.|+|+++..+... ..+.+
T Consensus 8 p~~V~~~~G~~v~L~C~~~~~~~~~~~~V~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sL~I 87 (225)
T 4fmk_A 8 LPEVRGRLGGTVELPCHLLPPTTERVSQVTWQRLDGTVVAAFHPSFGVDFPNSQFSKDRLSFVRARPETNADLRDATLAF 87 (225)
T ss_dssp CSEEEEETTSCEEECCEECSSCCCEEEEEEEECTTSCEEEEEETTTEEECCCTTSCTTTEEECCCSCSCCSSCCBCCEEE
T ss_pred CCEEEEecCCCEEEEEEEECCCCCceeEEEEEECCCcceEEEecccceeeccccccccceeeeccccccccccCcEEEEE
Confidence 456889999999999999888776556799999876543210 00011
Q ss_pred ------EEeeeEEEecC--------------------------eEEEeCCcEEEEeeeCCccCCcceeEEEEeCCCeeeE
Q psy12724 64 ------VSQSYTVNIMD--------------------------EHVLKGNSAVLKCHIPSFVADYVAVESWISDQGEELF 111 (167)
Q Consensus 64 ------~~g~y~c~~~~--------------------------~~v~~G~~a~l~C~~~~~~~~p~p~i~W~k~~~~~l~ 111 (167)
.+|.|.|.+.+ .....++.+.+.|.+.+ +.|.|.+.|.++++....
T Consensus 88 ~~v~~~D~G~Y~C~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~~~~--~~P~~~~~w~~~~~~~~~ 165 (225)
T 4fmk_A 88 RGLRVEDEGNYTCEFATFPNGTRRGVTWLRVIAQPENHAEAQEVTIGPQSVAVARCVSTG--GRPPARITWISSLGGEAK 165 (225)
T ss_dssp CSCCGGGCEEEEEEEEEETTEEEEEEEEEEEEBCCEEEEEECCBCCSSSCEEEEEEEEEE--EBSCCEEEEECSSCCEEE
T ss_pred ccCCHHHCcceEEEEEeCCCcceeeeeeeeeecCCceeecccceeecceeeeeeeeeecC--CCCCCEEEEEECCccccC
Confidence 27999998742 11135777788887643 458889999998743322
Q ss_pred Eee-eecCCceEEEccCCeEEEeecCcCCCCcceEEEeeecC
Q psy12724 112 VDM-TESTDGKYLVLPSGELHIRDVGPEDGYKSYQCRTKHRL 152 (167)
Q Consensus 112 ~~~-~~~~~~r~~~~~~g~L~I~~v~~~D~~G~Y~C~a~n~~ 152 (167)
... ....++.+.+ .+.|.|.+++.+|+ |.|+|.|.|..
T Consensus 166 ~~~~~~~~~~~~~~--~s~L~i~~~~~~d~-g~YtC~a~N~~ 204 (225)
T 4fmk_A 166 DTQEPGIQAGTVTI--ISRYSLVPVGRADG-VKVTCRVEHES 204 (225)
T ss_dssp EEEEECSSTTCEEE--EEEEEECCCGGGTT-CEEEEEEECTT
T ss_pred CcceEEecCCCEEE--EEEEEEeeCCHHHC-CEEEEEEEcCC
Confidence 110 0011222322 23699999999998 99999999976
No 73
>2p1y_A Bispecific alpha/beta TCR; autoimmunity, immunoglobulin fold, diabody, immune system; 2.42A {Mus musculus} PDB: 1bwm_A
Probab=99.70 E-value=6.4e-16 Score=117.84 Aligned_cols=131 Identities=20% Similarity=0.371 Sum_probs=87.8
Q ss_pred eeeEEeEEEEEeCCcEEEEeecCCCCCCcceeeEEeeCC-Cce-----------------------eee-cCCc-eE---
Q psy12724 13 YEAQVYDVFVIKGNAAVFKCNLPSFVSDHLDVVSWADTD-GGQ-----------------------YQI-DNQD-FV--- 63 (167)
Q Consensus 13 ~~~~~~~~~v~~G~~~~l~C~a~~~~~~~~~~i~W~k~~-~~~-----------------------~~~-~~~~-~v--- 63 (167)
+...|.++.+.+|+++.|.|. .+.+. +.|.|+|++ +.. +.. +... .+
T Consensus 3 v~q~p~~~~v~~G~~v~L~C~-~~~~~---~~i~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~L~I~ 78 (238)
T 2p1y_A 3 VTQSPRNKVAVTGGKVTLSCN-QTNNH---NNMYWYRQDTGHGLRLIHYSYGAGSTEKGDIPDGYKASRPSQENFSLILE 78 (238)
T ss_dssp EEEECSEEEEETTCCEEEEEE-ECSCC---SEEEEEEEETTTEEEEEEEESSTTCCEECSSCTTCEEECCSSSBCEEEES
T ss_pred ceECccceEEeCCCEEEEEee-cCCCC---ccEEEEEECCCCCcEEEEEEecCcceeCCCccceEEEEccCCceEEEEEe
Confidence 456788899999999999999 55543 579999852 110 000 0001 11
Q ss_pred -----EEeeeEEEecC------------------------------------------eEEEeCCcEEEEeeeCCccCCc
Q psy12724 64 -----VSQSYTVNIMD------------------------------------------EHVLKGNSAVLKCHIPSFVADY 96 (167)
Q Consensus 64 -----~~g~y~c~~~~------------------------------------------~~v~~G~~a~l~C~~~~~~~~p 96 (167)
.+|.|.|.+.+ ..+.+|+++.|.|.+.+ .|
T Consensus 79 ~v~~~DsG~Y~C~~~~~~g~~~~~~~~~~~~l~V~~~~~~~~p~~~~~~~~v~~~p~~~~v~~G~~v~L~C~~~~---~p 155 (238)
T 2p1y_A 79 LATPSQTSVYFCASGDLGQTNERLFFGHGTKLSVLGSADDAKKDAAKKDGQVRQSPQSLTVWEGETAILNCSYEN---SA 155 (238)
T ss_dssp SCCGGGCEEEEEEEEC------CEEECCCEEEEEECCCHHHHHHHHHHHTCCEEECSEEEEETTSCEEEEEECCC---TT
T ss_pred cCCcccCeeEEEEEEeCCCccccceeCCCeEEEEeccCCCCcCCcccceeeEEccCceEEEeCCCeEEEEEEEec---CC
Confidence 27999997632 12457999999999984 47
Q ss_pred ceeEEEEeCCC-ee---eEEeee---ecCCceEEEcc-----CCeEEEeecCcCCCCcceEEEeeec
Q psy12724 97 VAVESWISDQG-EE---LFVDMT---ESTDGKYLVLP-----SGELHIRDVGPEDGYKSYQCRTKHR 151 (167)
Q Consensus 97 ~p~i~W~k~~~-~~---l~~~~~---~~~~~r~~~~~-----~g~L~I~~v~~~D~~G~Y~C~a~n~ 151 (167)
.|.++|+|++. .. +..... ....+|+.+.. .+.|.|.+++.+|+ |.|.|.|.|.
T Consensus 156 ~~~i~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~I~~v~~~D~-G~Y~C~a~n~ 221 (238)
T 2p1y_A 156 FDYFPWYQQFPGEGPALLISILSVSDKKEDGRFTIFFNKREKKLSLHIADSQPGDS-ATYFCAAIDT 221 (238)
T ss_dssp CCEEEEEEECTTSCCEEEEEEETTCSEEEETTEEEEEETTTTEEEEEETTCCGGGC-EEEEEEEEET
T ss_pred CCcEEEEEECCCCCCEEEEEEccCCCcccCCceEEEecCCCCeEEEEEcCCCHHHC-EEEEEEEeeC
Confidence 88999999641 11 111000 01245676642 24799999999999 9999999998
No 74
>3ejj_X Macrophage colony-stimulating factor 1 receptor; growth factor-receptor complex, receptor tyrosine kinase, CY 4-helix bundle, ATP-binding; HET: NAG; 2.40A {Mus musculus} PDB: 4exp_X*
Probab=99.70 E-value=1.4e-16 Score=124.01 Aligned_cols=140 Identities=19% Similarity=0.253 Sum_probs=95.7
Q ss_pred eeeEEeEEEEEeCCcEEEEeecCCCCCCcceeeEEeeCCCceeeecCC------ceE--------EEeeeEEEec-C---
Q psy12724 13 YEAQVYDVFVIKGNAAVFKCNLPSFVSDHLDVVSWADTDGGQYQIDNQ------DFV--------VSQSYTVNIM-D--- 74 (167)
Q Consensus 13 ~~~~~~~~~v~~G~~~~l~C~a~~~~~~~~~~i~W~k~~~~~~~~~~~------~~v--------~~g~y~c~~~-~--- 74 (167)
|...+.+..+.+|+++.|.|.+.+.+.+ +.+.|++.++..+..+.. ..+ ..|.|+|.+. +
T Consensus 92 ~~~~~~~~~v~~g~~v~L~C~~~~~~~~--~~v~W~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~~~~~~ 169 (289)
T 3ejj_X 92 WNLLAQEVTVVEGQEAVLPCLITDPALK--DSVSLMREGGRQVLRKTVYFFSPWRGFIIRKAKVLDSNTYVCKTMVNGRE 169 (289)
T ss_dssp EEESCSEEEEETTSCEEECEEESCGGGG--GSEEEEEGGGEECCTTCCEEEETTTEEEESSCCGGGCEEEEEEEEETTEE
T ss_pred eecccceEEEecCCceEeEEEccCCCcc--eEEEEEecCCeecCCCccEEECCCCCEEEeecccccCEEEEEEEEeCCCc
Confidence 6667788899999999999999976543 349998766654432111 111 2699999874 1
Q ss_pred --------------------------eEEEeCCcEEEEeeeCCccCCcceeEEEEeCCCeeeEEeee-ecCCceEEEccC
Q psy12724 75 --------------------------EHVLKGNSAVLKCHIPSFVADYVAVESWISDQGEELFVDMT-ESTDGKYLVLPS 127 (167)
Q Consensus 75 --------------------------~~v~~G~~a~l~C~~~~~~~~p~p~i~W~k~~~~~l~~~~~-~~~~~r~~~~~~ 127 (167)
..+.+|+++.|.|.+.+ +.|.|.++|+|++ ..+..... ...... ...+
T Consensus 170 ~~~~~~~l~V~~~~~~~p~i~~~~~~~~~~~g~~~~l~C~~~~--~~p~~~i~W~~~~-~~~~~~~~~~~~~~~--~~~~ 244 (289)
T 3ejj_X 170 STSTGIWLKVNRVHPEPPQIKLEPSKLVRIRGEAAQIVCSATN--AEVGFNVILKRGD-TKLEIPLNSDFQDNY--YKKV 244 (289)
T ss_dssp EECCCEEEEEESSCCCCCEEEEESSSEECCSSSCEEEEEEEEE--SSSCCEEEEEETT-EECCCCEEEEECSSS--EEEE
T ss_pred cccccEEEEEEECCCCCCeEEecCCceEEEeCCcEEEEEEeCC--CCCceEEEEEECC-EEeeccCCcccccce--EEee
Confidence 11247999999999974 2588999999997 44421100 000111 1225
Q ss_pred CeEEEeecCcCCCCcceEEEeeecC---cceEEEee
Q psy12724 128 GELHIRDVGPEDGYKSYQCRTKHRL---TGETRLSA 160 (167)
Q Consensus 128 g~L~I~~v~~~D~~G~Y~C~a~n~~---~~~~~l~~ 160 (167)
+.|.|.+++.+|+ |.|+|.|.|.. +..+.|..
T Consensus 245 ~~L~i~~v~~~d~-G~Y~C~a~N~~G~~~~s~~L~~ 279 (289)
T 3ejj_X 245 RALSLNAVDFQDA-GIYSCVASNDVGTRTATMNFQV 279 (289)
T ss_dssp EEEEESSCCSSSC-EEEEEEEECSSCEEEEEEEEEC
T ss_pred EEEEEEeecccCC-EEEEEEEEcCCCCccccEEEEE
Confidence 6899999999998 99999999997 33445544
No 75
>1hng_A CD2; T lymphocyte adhesion glycoprotein; 2.80A {Rattus rattus} SCOP: b.1.1.1 b.1.1.3
Probab=99.70 E-value=4.1e-16 Score=115.28 Aligned_cols=116 Identities=13% Similarity=0.138 Sum_probs=79.8
Q ss_pred eEEEEEeCCcEEEEeecCCCCCCcceeeEEeeCCCcee--------eecCCc-------eE--------EEeeeEEEecC
Q psy12724 18 YDVFVIKGNAAVFKCNLPSFVSDHLDVVSWADTDGGQY--------QIDNQD-------FV--------VSQSYTVNIMD 74 (167)
Q Consensus 18 ~~~~v~~G~~~~l~C~a~~~~~~~~~~i~W~k~~~~~~--------~~~~~~-------~v--------~~g~y~c~~~~ 74 (167)
+.+.+.+|+++.|.|.+.+... +.+.|.|+|++.... .+...| .+ .+|.|+|.+.+
T Consensus 4 ~~v~~~~G~~v~L~c~~~~~~~-~~~~i~W~k~~~~i~~~~~~~~~~~~~~r~~~~~~gsL~I~~v~~~D~G~Y~C~~~n 82 (176)
T 1hng_A 4 GTVWGALGHGINLNIPNFQMTD-DIDEVRWERGSTLVAEFKRKMKPFLKSGAFEILANGDLKIKNLTRDDSGTYNVTVYS 82 (176)
T ss_dssp EEEEEETTSCEEECCTTCCCCT-TEEEEEEEETTEEEEEEETTSCCEESSTTEEECTTSCEEESSCCGGGCEEEEEEEEE
T ss_pred eEEEEEcCCcEEEcCCCCCccc-ccccEEEEeCCceeEEEcCCCeecCCCCeEEECCCCcEEEcccccccCEEEEEEEEe
Confidence 4577899999999996543212 246899999863211 111111 11 27999998742
Q ss_pred ----------------------eEEEeCCcEEEEeeeCCccCCcceeEEEEeCCCeeeEEeeeecCCceEEEccCCeEEE
Q psy12724 75 ----------------------EHVLKGNSAVLKCHIPSFVADYVAVESWISDQGEELFVDMTESTDGKYLVLPSGELHI 132 (167)
Q Consensus 75 ----------------------~~v~~G~~a~l~C~~~~~~~~p~p~i~W~k~~~~~l~~~~~~~~~~r~~~~~~g~L~I 132 (167)
.....+.++.|.|.+.+ .|.|.++|+||+ ..+.. + ..+.|
T Consensus 83 ~~g~~~~~~~~~l~V~~~~~~p~i~~~~~~v~L~C~~~g---~p~p~i~W~~~g-~~l~~------~--------~~~~i 144 (176)
T 1hng_A 83 TNGTRILNKALDLRILEMVSKPMIYWECSNATLTCEVLE---GTDVELKLYQGK-EHLRS------L--------RQKTM 144 (176)
T ss_dssp TTCCEEEEEEEEEEEECCCCCCEEEEETTTTEEEEECSS---CSSCEEEEEETT-EEEEE------E--------SSSEE
T ss_pred CCCCEEEEEEEEEEEeCCCCCCEEEecCCcEEEEEEecC---CCCcEEEEEECC-EECCC------C--------CcEEE
Confidence 01123567999999984 588999999997 55532 1 12567
Q ss_pred eecCcCCCCcceEEEeeecCc
Q psy12724 133 RDVGPEDGYKSYQCRTKHRLT 153 (167)
Q Consensus 133 ~~v~~~D~~G~Y~C~a~n~~~ 153 (167)
++++.+|+ |.|+|.|.|.++
T Consensus 145 ~~~~~~d~-G~Y~C~a~N~~g 164 (176)
T 1hng_A 145 SYQWTNLR-APFKCKAVNRVS 164 (176)
T ss_dssp EEECSCCS-SCEEEEEEETTE
T ss_pred EEEEccCC-eEEEEEEEecCC
Confidence 78999998 999999999983
No 76
>2y25_A Myomesin; structural protein, sarcomere, M-BAND, immunoglobulin-like D; 3.50A {Homo sapiens}
Probab=99.69 E-value=3e-16 Score=123.53 Aligned_cols=66 Identities=21% Similarity=0.371 Sum_probs=55.2
Q ss_pred EEEeCCcEEEEeeeCCccCCcceeEEEEeCCCeeeEEeeeecCCceEEEccC-C---eEEEeecCcCCCCcceEEEeeec
Q psy12724 76 HVLKGNSAVLKCHIPSFVADYVAVESWISDQGEELFVDMTESTDGKYLVLPS-G---ELHIRDVGPEDGYKSYQCRTKHR 151 (167)
Q Consensus 76 ~v~~G~~a~l~C~~~~~~~~p~p~i~W~k~~~~~l~~~~~~~~~~r~~~~~~-g---~L~I~~v~~~D~~G~Y~C~a~n~ 151 (167)
.+.+|+++.|.|.+. |+|.|.++|+|++ ..+. .+.++.+..+ | .|.|.+++.+|+ |.|+|.|.|.
T Consensus 233 ~v~~g~~~~l~C~~~---g~p~p~i~W~~~g-~~~~------~~~~~~~~~~~~~~~~L~i~~v~~~d~-G~Y~C~a~N~ 301 (317)
T 2y25_A 233 TIQEGKALNLTCNVW---GDPPPEVSWLKNE-KALA------SDDHCNLKFEAGRTAYFTINGVSTADS-GKYGLVVKNK 301 (317)
T ss_dssp EEETTSBBCEEEEEE---CSSCCEEEEEESS-SEEC------CCSSEEECCBTTTEEEEEEBSCCSTTC-EEEEEEEEET
T ss_pred EEEcCCEEEEEEEEe---cCCCCEEEEEECC-EeCC------CCCcEEEEEcCCCEEEEEECCCCHHHC-EEEEEEEEeC
Confidence 567899999999998 4599999999998 4553 3556766544 5 899999999998 9999999998
Q ss_pred C
Q psy12724 152 L 152 (167)
Q Consensus 152 ~ 152 (167)
.
T Consensus 302 ~ 302 (317)
T 2y25_A 302 Y 302 (317)
T ss_dssp T
T ss_pred C
Confidence 7
No 77
>2o26_X MAST/stem cell growth factor receptor; stem cell factor, receptor tyrosine kinase, class III, recep ligand complex, cytokine, 4-helix bundle; HET: NAG FUL MAN NDG; 2.50A {Mus musculus}
Probab=99.69 E-value=6.7e-16 Score=120.80 Aligned_cols=123 Identities=16% Similarity=0.266 Sum_probs=94.7
Q ss_pred eceeeEEeEEEEEeCCcEEEEeecCCCCCCcceeeEEeeCCCcee--eecCCceE-------EEeeeEEEecC-------
Q psy12724 11 QYYEAQVYDVFVIKGNAAVFKCNLPSFVSDHLDVVSWADTDGGQY--QIDNQDFV-------VSQSYTVNIMD------- 74 (167)
Q Consensus 11 ~~~~~~~~~~~v~~G~~~~l~C~a~~~~~~~~~~i~W~k~~~~~~--~~~~~~~v-------~~g~y~c~~~~------- 74 (167)
+.+...+.+..+.+|+++.|.|.+.+ .+.|+|++.... ..++.... ..|.|+|.+.+
T Consensus 13 P~i~~~~~~~~v~~G~~v~l~C~~~~-------~i~W~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~~~ng~~~~~~ 85 (290)
T 2o26_X 13 PSIHPAQSELIVEAGDTLSLTCIDPD-------FVRWTFKTYFNEMVENKKNEWIQEKAEATRTGTYTCSNSNGLTSSIY 85 (290)
T ss_dssp CEESSCSSEEEEETTSCEEEEEECTT-------EEEEEEECSSSCEEEECSSEEEETTCCGGGCEEEEEEESSSCEEEEE
T ss_pred CEEeCCCCeEEEcCCCcEEEEECCCC-------cEEEecCCcceeeecCCCceEEEeccCHHhCeEEEEEeeCCccEEEE
Confidence 45667788899999999999999987 499999976441 11221111 27999998732
Q ss_pred ---------------eEEEeCCcEEEEeeeCCccCCcc-eeEEEE-eCCCeeeEEeeeecCCceEEEccCCeEEEeecCc
Q psy12724 75 ---------------EHVLKGNSAVLKCHIPSFVADYV-AVESWI-SDQGEELFVDMTESTDGKYLVLPSGELHIRDVGP 137 (167)
Q Consensus 75 ---------------~~v~~G~~a~l~C~~~~~~~~p~-p~i~W~-k~~~~~l~~~~~~~~~~r~~~~~~g~L~I~~v~~ 137 (167)
..+.+|+++.|.|.+.+ |. |.++|+ +|+ ..+. .+.++....++.|.|.+++.
T Consensus 86 l~V~~~~~~~~~~~~~~~~~g~~v~l~C~~~~----p~~~~v~W~~~~g-~~l~------~~~~~~~~~~~~L~i~~v~~ 154 (290)
T 2o26_X 86 VFVRDPAKLFLVGLPLFGKEDSDALVRCPLTD----PQVSQYSLIECDG-KSLP------TDLTFVPNPKAGITIKNVKR 154 (290)
T ss_dssp EEEECSSCCBCCCCCEEEETTSCEEECCCBSC----CSCEEEEEEETTS-CCCC------TTCEEEEETTTEEEEESCCG
T ss_pred EEEeCCCcccccccceEEecCCeEEEeCcCCC----CCCceEEEEeCCC-cCCC------CCCceeeCCCCCEEEecccH
Confidence 34567999999999973 77 899995 555 5552 35677777888999999999
Q ss_pred CCCCc-ceEEEeeecC
Q psy12724 138 EDGYK-SYQCRTKHRL 152 (167)
Q Consensus 138 ~D~~G-~Y~C~a~n~~ 152 (167)
+|+ | .|+|.|.|..
T Consensus 155 ~d~-G~~Y~C~a~n~~ 169 (290)
T 2o26_X 155 AYH-RLCVRCAAQRDG 169 (290)
T ss_dssp GGT-TCEEEEEEEETT
T ss_pred HHC-CCEEEEEEEECC
Confidence 999 9 9999999975
No 78
>3oq3_B IFN-alpha/beta binding protein C12R; mousepox virus, moscow strain, cytokine decoy RE virus/viral protein, type-1 interferon, soluble A/B-IFNR; HET: EPE; 2.10A {Ectromelia virus}
Probab=99.69 E-value=1.4e-16 Score=127.70 Aligned_cols=124 Identities=19% Similarity=0.267 Sum_probs=91.4
Q ss_pred EeEEEEEeCCcEEEEeecCCCCC------CcceeeEEeeCCCceeeec-----CCceE------EEe-eeEEEecCe---
Q psy12724 17 VYDVFVIKGNAAVFKCNLPSFVS------DHLDVVSWADTDGGQYQID-----NQDFV------VSQ-SYTVNIMDE--- 75 (167)
Q Consensus 17 ~~~~~v~~G~~~~l~C~a~~~~~------~~~~~i~W~k~~~~~~~~~-----~~~~v------~~g-~y~c~~~~~--- 75 (167)
..+..|.+|+++.|.|.+.+.+. .+-+.++|+|++......+ +...+ .+| .|+|.+.+.
T Consensus 36 ~~~v~v~eG~~v~L~C~~~~~~~~~~~~~~p~~~v~W~k~~~~~~~~~~~~~~~~L~i~~v~~~D~Gs~Y~C~a~n~~g~ 115 (329)
T 3oq3_B 36 TMNDMAALGEPFSAKCPPIEDSLLSHRYNDKDNVVNWEKIGKTRRPLNRRVKNGDLWIANYTSNDSHRRYLCTVTTKNGD 115 (329)
T ss_dssp EEEEEECTTSCEEECCHHHHCTTTGGGSCCTTCEEEEEECSSSCEECSTTEETTEEEESSCCGGGGGCCEEEEEECTTSC
T ss_pred cceEEEECCCeEEEEccCCCCccccccccCCCCeeEEEECCCCccccCceeecceEEEcCCChHhCCCcEEEEEEeCCCc
Confidence 36788999999999999987543 1135799999975432211 11111 279 899988541
Q ss_pred -------E----------------EEeCCcEEEEeeeCCccCCc-ceeEEEEeCCCeeeEEeeeecCCceEEEccCCeEE
Q psy12724 76 -------H----------------VLKGNSAVLKCHIPSFVADY-VAVESWISDQGEELFVDMTESTDGKYLVLPSGELH 131 (167)
Q Consensus 76 -------~----------------v~~G~~a~l~C~~~~~~~~p-~p~i~W~k~~~~~l~~~~~~~~~~r~~~~~~g~L~ 131 (167)
. +.+|+++.|.|.+.+ .| .|.++|+|++ ..+. ..+.++... ++.|.
T Consensus 116 ~~~~~~~~v~~~~p~~~~~~~~~~~~~G~~v~L~C~~~g---~p~~~~i~W~k~~-~~l~-----~~~~~~~~~-~~~L~ 185 (329)
T 3oq3_B 116 CVQGIVRSHIRKPPSCIPETYELGTHDKYGIDLYCGILY---AKHYNNITWYKNN-QELI-----IDGTKYSQS-GQNLI 185 (329)
T ss_dssp EEEEEEEEEECCCCSCEEEEEETTSSTTTCEEEECCCCS---CCCCCEEEEEETT-EECC-----CSSSSEEEE-TTEEE
T ss_pred eeeEEEEEEEcCCCcEeccccceEEeCCCcEEEEeccCC---CCCCceEEEEECC-ccCC-----CCCceEecC-CCEEE
Confidence 1 124999999999984 48 8999999998 4542 135567655 78999
Q ss_pred EeecCcCCCCcceEEEeeec
Q psy12724 132 IRDVGPEDGYKSYQCRTKHR 151 (167)
Q Consensus 132 I~~v~~~D~~G~Y~C~a~n~ 151 (167)
|.+++.+|+ |.|+|.|.|.
T Consensus 186 I~~v~~~D~-G~Y~C~a~n~ 204 (329)
T 3oq3_B 186 IHNPELEDS-GRYDCYVHYD 204 (329)
T ss_dssp ECSCCGGGC-EEEEEEEEEC
T ss_pred EeecChhhC-EEEEEEEEec
Confidence 999999999 9999999996
No 79
>3grw_A Fibroblast growth factor receptor 3; FGFR3, protein-protein complex, receptor tyrosine kinas binding, immunoglobulin domain, kinase, membrane, nucleotid binding; HET: NAG; 2.10A {Homo sapiens}
Probab=99.69 E-value=8.1e-17 Score=122.52 Aligned_cols=130 Identities=18% Similarity=0.331 Sum_probs=90.0
Q ss_pred EeEEEEEeCCcEEEEeecCCCCCCcceeeEEeeCCCceeeecCC----------ceE--------EEeeeEEEecC----
Q psy12724 17 VYDVFVIKGNAAVFKCNLPSFVSDHLDVVSWADTDGGQYQIDNQ----------DFV--------VSQSYTVNIMD---- 74 (167)
Q Consensus 17 ~~~~~v~~G~~~~l~C~a~~~~~~~~~~i~W~k~~~~~~~~~~~----------~~v--------~~g~y~c~~~~---- 74 (167)
+....+.+|+++.|.|.+.+.+. +.+.|+|++. .+..... ..+ ..|.|+|.+.+
T Consensus 22 ~~~~~v~~G~~v~L~C~~~~~p~---~~v~W~~~~~-~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~~~~~~~~ 97 (241)
T 3grw_A 22 KKLLAVPAANTVRFRCPAAGNPT---PSISWLKNGR-EFRGEHRIGGIKLRHQQWSLVMESVVPSDRGNYTCVVENKFGS 97 (241)
T ss_dssp CCEEEEETTSEEEEECCEECSSC---CEEEEEETTE-ECCGGGSTTCCEEEGGGTEEEECSCCGGGCEEEEEEEEETTEE
T ss_pred CcceEEcCCCeEEEEEEecCCCC---ceeEEEECCc-ccCCCCcccceeeeccceEEEEEeCCcccCEEEEEEEeecCCc
Confidence 45788999999999999998765 4799999854 3322110 011 26999998632
Q ss_pred --------------------------eEEEeCCcEEEEeeeCCccCCcceeEEEEe----CCCeeeEEeeeecCCceEE-
Q psy12724 75 --------------------------EHVLKGNSAVLKCHIPSFVADYVAVESWIS----DQGEELFVDMTESTDGKYL- 123 (167)
Q Consensus 75 --------------------------~~v~~G~~a~l~C~~~~~~~~p~p~i~W~k----~~~~~l~~~~~~~~~~r~~- 123 (167)
..+.+|+++.|.|.+. +.|.|.++|+| ++ ..+.+ .+..+.
T Consensus 98 ~~~~~~l~V~~~~~~~~~~~~~~~~~~~~~~g~~v~L~C~~~---~~p~p~v~W~~~~~~~g-~~~~~-----~~~~~~~ 168 (241)
T 3grw_A 98 IRQTYTLDVLERSPHRPILQAGLPANQTAVLGSDVEFHCKVY---SDAQPHIQWLKHVEVNG-SKVGP-----DGTPYVT 168 (241)
T ss_dssp EEEEEEEEEECCCCCCCEEEECTTCSEECCTTCCEEEEEEEE---CSSCCEEEEEEECCSSS-CSSCT-----TTCCCEE
T ss_pred eEEEEEEEEeccCCCCceeecCCCccceecCCCEEEEEEEEe---cCCCCEEEEEEcccCCC-cccCC-----CCceeee
Confidence 2234699999999997 45888999999 55 34421 111111
Q ss_pred E---------ccCCeEEEeecCcCCCCcceEEEeeecC---cceEEEee
Q psy12724 124 V---------LPSGELHIRDVGPEDGYKSYQCRTKHRL---TGETRLSA 160 (167)
Q Consensus 124 ~---------~~~g~L~I~~v~~~D~~G~Y~C~a~n~~---~~~~~l~~ 160 (167)
. ..++.|.|.+++.+|+ |.|+|.|.|.. +..+.|.+
T Consensus 169 ~~~~~~~~~~~~~~~L~i~~~~~~d~-G~Y~C~a~N~~g~~~~~~~l~V 216 (241)
T 3grw_A 169 VLKSWISESVEADVRLRLANVSERDG-GEYLCRATNFIGVAEKAFWLSV 216 (241)
T ss_dssp EEEEEECSBSEEEEEEEECSCCGGGC-EEEEEEEECSSCEEEEEEEEEC
T ss_pred eeeEeeeeecCCceEEEECcCCcccC-cEEEEEEecCcceEEEEEEEEe
Confidence 1 1245799999999998 99999999987 33444444
No 80
>2ec8_A MAST/stem cell growth factor receptor; glycoprotein, receptor tyrosine kinase, growth factor cytoki dimerization, transferase; HET: NAG; 3.00A {Homo sapiens} PDB: 2e9w_A*
Probab=99.69 E-value=8e-17 Score=136.21 Aligned_cols=130 Identities=13% Similarity=0.171 Sum_probs=96.0
Q ss_pred eceeeEEeEEEEEeCCcEEEEeecCCCCCCcceeeEEeeCCCce-ee-e-----cCC-c-----eE--------EEeeeE
Q psy12724 11 QYYEAQVYDVFVIKGNAAVFKCNLPSFVSDHLDVVSWADTDGGQ-YQ-I-----DNQ-D-----FV--------VSQSYT 69 (167)
Q Consensus 11 ~~~~~~~~~~~v~~G~~~~l~C~a~~~~~~~~~~i~W~k~~~~~-~~-~-----~~~-~-----~v--------~~g~y~ 69 (167)
+.+...+.+..+.+|+++.|.|.+.+.+.+ ..+.|.|++... +. . ..+ . .+ ..|.|+
T Consensus 212 p~i~~~~~~~~v~~G~~v~L~C~~~g~p~p--~~i~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~I~~~~~~D~G~Y~ 289 (524)
T 2ec8_A 212 PVVSVSKASYLLREGEEFTVTCTIKDVSSS--VYSTWKRENSQTKLQEKYNSWHHGDFNYERQATLTISSARVNDSGVFM 289 (524)
T ss_dssp CEEECSCSEEEEETTSCEEEEEEEEESSTT--CEEEEEETTCSCCCCEEEEEEECSSSCEEEEEEEEESSCCTTTCEEEE
T ss_pred CcEEecCCcceEEcCCcEEEEEEEecCCCc--EEEEEEeCCCCCccccccccccccCCccceEEEEEECCCCHHHCEEEE
Confidence 456777788899999999999999987654 239999997651 11 1 000 0 11 279999
Q ss_pred EEecC----------------------------eEEEeCCcEEEEeeeCCccCCccee-EEEEeCCCeeeEEeeeecCCc
Q psy12724 70 VNIMD----------------------------EHVLKGNSAVLKCHIPSFVADYVAV-ESWISDQGEELFVDMTESTDG 120 (167)
Q Consensus 70 c~~~~----------------------------~~v~~G~~a~l~C~~~~~~~~p~p~-i~W~k~~~~~l~~~~~~~~~~ 120 (167)
|.+.+ ..+.+|+++.|.|.+.+ .|.|. ++|+|++ ..+.. ...
T Consensus 290 C~a~n~~g~~~~~~~l~V~~~p~~~~~~~~~~~~~v~~G~~v~l~C~~~g---~P~p~~v~W~k~g-~~~~~-----~~~ 360 (524)
T 2ec8_A 290 CYANNTFGSANVTTTLEVVDKGFINIFPMINTTVFVNDGENVDLIVEYEA---FPKPEHQQWIYMN-RTFTD-----KWE 360 (524)
T ss_dssp EEEECSSCEEEEEEEEEEESSCEEEEEESSCSEEEECTTCCEEEEEEEEE---ESCCCEEEEESSS-CBCSS-----SBC
T ss_pred EEEEecCCceEEEEEEEEeccCceEeecCCCceEEEcCCCcEEEEEEEee---cCCCcEEEEEECC-eeccC-----Ccc
Confidence 98633 34567999999999974 58888 9999997 45531 223
Q ss_pred eEEEccC-------CeEEEeecCcCCCCcceEEEeeecC
Q psy12724 121 KYLVLPS-------GELHIRDVGPEDGYKSYQCRTKHRL 152 (167)
Q Consensus 121 r~~~~~~-------g~L~I~~v~~~D~~G~Y~C~a~n~~ 152 (167)
++....+ +.|.|.+++.+|+ |.|+|.|.|..
T Consensus 361 ~~~~~~~~~~~~~~~~L~i~~v~~~d~-G~Y~C~a~N~~ 398 (524)
T 2ec8_A 361 DYPKSENESNIRYVSELHLTRLKGTEG-GTYTFLVSNSD 398 (524)
T ss_dssp CEESCCSSSCCEEEEEEEECSCCGGGC-EEEEEEEECSS
T ss_pred ceeEEccCCCceeEEEEEEeecCcccC-eEEEEEEEecC
Confidence 5655543 3799999999999 99999999987
No 81
>1cs6_A Axonin-1; neural cell adhesion, cell adhesion; 1.80A {Gallus gallus} SCOP: b.1.1.4 b.1.1.4 b.1.1.4 b.1.1.4 PDB: 2om5_A
Probab=99.69 E-value=6.9e-17 Score=130.88 Aligned_cols=132 Identities=15% Similarity=0.318 Sum_probs=97.0
Q ss_pred eeeceeeEEeEEEE---EeCCcEEEEeecCCCCCCcceeeEEeeCCCceeeec-CCc--------eE-------EEeeeE
Q psy12724 9 ISQYYEAQVYDVFV---IKGNAAVFKCNLPSFVSDHLDVVSWADTDGGQYQID-NQD--------FV-------VSQSYT 69 (167)
Q Consensus 9 ~~~~~~~~~~~~~v---~~G~~~~l~C~a~~~~~~~~~~i~W~k~~~~~~~~~-~~~--------~v-------~~g~y~ 69 (167)
..+.|..+|.+..+ .+|+++.|.|.+.+.|. +.+.|+|++. .+... ..+ .+ .+|.|+
T Consensus 3 ~~P~~~~~p~~~~~~~~~~g~~v~l~C~~~g~p~---~~v~W~k~g~-~~~~~~~~~~~~~~~~L~i~~~~~~~D~G~Y~ 78 (382)
T 1cs6_A 3 YGPVFEEQPAHTLFPEGSAEEKVTLTCRARANPP---ATYRWKMNGT-ELKMGPDSRYRLVAGDLVISNPVKAKDAGSYQ 78 (382)
T ss_dssp EEEEEEECCCCEEEETTCSCCEEEECCEEEEESC---CEEEEEETTE-ECCCSTTSSEEEETTEEEEESCCHHHHCEEEE
T ss_pred CCCEEEECCCcEEEecCCCCCcEEEEEEecCCCC---CEEEEEECCE-ECCcCCCccEEeeCCeEEEecccccccCEEEE
Confidence 35678999999887 78999999999987764 4799999854 33221 111 11 269999
Q ss_pred EEecC---------------------------eEEEeCCcEEEEeeeCCccCCcceeEEEEeCCCeeeEEeeeecCCceE
Q psy12724 70 VNIMD---------------------------EHVLKGNSAVLKCHIPSFVADYVAVESWISDQGEELFVDMTESTDGKY 122 (167)
Q Consensus 70 c~~~~---------------------------~~v~~G~~a~l~C~~~~~~~~p~p~i~W~k~~~~~l~~~~~~~~~~r~ 122 (167)
|.+.+ ..+.+|+++.|.|.+.+ +.|.+.++|+|++. .+.. ..++++
T Consensus 79 C~a~n~~g~~~s~~~~l~v~~~~~~~~~~~~~~~v~~G~~v~l~C~~~~--~~p~~~i~W~~~~~-~~~~----~~~~~~ 151 (382)
T 1cs6_A 79 CVATNARGTVVSREASLRFGFLQEFSAEERDPVKITEGWGVMFTCSPPP--HYPALSYRWLLNEF-PNFI----PADGRR 151 (382)
T ss_dssp EEEEETTEEEECCCEEEEEEEECCCCSSCCCCEEEETTSCEEECCCCCS--EESCCEEEEEESST-TCBC----CCCSSE
T ss_pred EEEEcCCcEEEecceEEEeeccccccccCCCceEEecCCcEEEEeCCCC--CCCCcEEEEEECCC-cccc----ccCceE
Confidence 98732 24568999999999753 34788999999974 4321 123444
Q ss_pred EEc-cCCeEEEeecCcCCCCcceEEEeeecC
Q psy12724 123 LVL-PSGELHIRDVGPEDGYKSYQCRTKHRL 152 (167)
Q Consensus 123 ~~~-~~g~L~I~~v~~~D~~G~Y~C~a~n~~ 152 (167)
.+. .++.|.|.+++.+|+ |.|+|.|.|..
T Consensus 152 ~~~~~~~~L~i~~~~~~d~-G~Y~C~~~n~~ 181 (382)
T 1cs6_A 152 FVSQTTGNLYIAKTEASDL-GNYSCFATSHI 181 (382)
T ss_dssp EECTTTCCEEESSCCGGGC-EEEEEEEEEEE
T ss_pred EEecCceEEEEEeeCcccC-eeEEEEEEEcc
Confidence 444 458999999999999 99999999876
No 82
>3ux9_B SCFV antibody; five helices, long loop connecting helix, hydrophobic intera cytokine-immune system complex; 2.80A {Homo sapiens}
Probab=99.69 E-value=2.7e-16 Score=121.53 Aligned_cols=134 Identities=21% Similarity=0.296 Sum_probs=86.8
Q ss_pred eEEeEEEEEeCCcEEEEeecCCCCCCcceeeEEeeCC-Cce---eee-c-------CCc----------eE--------E
Q psy12724 15 AQVYDVFVIKGNAAVFKCNLPSFVSDHLDVVSWADTD-GGQ---YQI-D-------NQD----------FV--------V 64 (167)
Q Consensus 15 ~~~~~~~v~~G~~~~l~C~a~~~~~~~~~~i~W~k~~-~~~---~~~-~-------~~~----------~v--------~ 64 (167)
.++..+.|.+|+++.|.|.+.+...+ .+.+.|+|.+ +.. +.. + ..| .+ .
T Consensus 7 ~~p~~~~v~~G~~v~L~C~~~~~~~~-~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~D 85 (256)
T 3ux9_B 7 TQPPSVSGAPGQRVTISCSGSSSNIG-SNYVSWYQQLPGTAPKLLIYDNNQRPSGVPDRFSGSKSGTSASLAITGLQSED 85 (256)
T ss_dssp BCCSEEEECTTCCEEEEEECCTTTTT-TSCCEEEEECTTSCCEEEEBTTTBCCTTCCTTEEEEEETTEEEEEECSCCGGG
T ss_pred ecCCcEEEcCCCcEEEEEecCCCCCC-CceEEEEEECCCCCCEEEEEecCCCCCCcCCcEEEEccCCEEEEEECCCChhh
Confidence 45667899999999999999876211 2479999853 111 100 0 011 11 2
Q ss_pred EeeeEEEecC------------------------------------------------eEEEeCCcEEEEeeeCCccCCc
Q psy12724 65 SQSYTVNIMD------------------------------------------------EHVLKGNSAVLKCHIPSFVADY 96 (167)
Q Consensus 65 ~g~y~c~~~~------------------------------------------------~~v~~G~~a~l~C~~~~~~~~p 96 (167)
+|.|.|.+.+ ..+.+|+++.|.|.+.+. ..+
T Consensus 86 sG~Y~C~~~~~~~~~~~~~~~~~l~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~G~~v~L~C~~~~~-~~~ 164 (256)
T 3ux9_B 86 EADYYCQVRDNNENEWVFGGGTKLTVLGSGGSTITSYNVYYTKLSSSGSEVQLVESGGGLVQPGGSLRLSCAASGF-TFS 164 (256)
T ss_dssp CEEEEEEEEETTTTEEEECCCEEEEEC----------------------CCEEEEECCEEECTTCCEEEEEEEESS-CGG
T ss_pred CEEEEEEEEECCCCceEECCCEEEEEECCCCCcCccceeEEeecCCCccceeEEcCCCeEEcCCCeEEEEEEEeCC-ccc
Confidence 7999998642 123469999999999753 112
Q ss_pred ceeEEEEeCC-CeeeEEe--e---------eecCCceEEEccCC-----eEEEeecCcCCCCcceEEEeeec
Q psy12724 97 VAVESWISDQ-GEELFVD--M---------TESTDGKYLVLPSG-----ELHIRDVGPEDGYKSYQCRTKHR 151 (167)
Q Consensus 97 ~p~i~W~k~~-~~~l~~~--~---------~~~~~~r~~~~~~g-----~L~I~~v~~~D~~G~Y~C~a~n~ 151 (167)
.+.+.|+|++ +..+... . .+...+|+.+..++ .|.|.+++.+|+ |.|.|.|.|.
T Consensus 165 ~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~I~~v~~~Ds-G~Y~C~~~~~ 235 (256)
T 3ux9_B 165 SYAMSWVRQAPGKGLEWVSAISGSGGSTYYADSVKGRFTISRDNSKNTLYLQMNSLRAEDT-AVYYCARYID 235 (256)
T ss_dssp GSEEEEEEECTTCCEEEEEEECSSSSCEEECGGGTTTEEEEEETTTTEEEEEECSCCGGGC-EEEEEEEEET
T ss_pred ccEEEEEEECCCCCcEEEEEEccCCCceecCccccceEEEEecCCCCEEEEEECCCChhhC-EEEEEEEEcC
Confidence 7899999863 1222100 0 00113477766433 499999999999 9999999996
No 83
>1itb_B Type 1 interleukin-1 receptor; immunoglobulin fold, transmembrane, glycoprotein, signal, complex (immunoglobulin/receptor); 2.50A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 b.1.1.4 PDB: 1ira_Y* 4dep_B* 1g0y_R
Probab=99.69 E-value=5.6e-16 Score=122.41 Aligned_cols=125 Identities=14% Similarity=0.211 Sum_probs=86.9
Q ss_pred eEEEEEeCCcEEEEeec------CCCCCCcceeeEEeeCCCceeeecCCc------eE--------EEeeeEEEec-C--
Q psy12724 18 YDVFVIKGNAAVFKCNL------PSFVSDHLDVVSWADTDGGQYQIDNQD------FV--------VSQSYTVNIM-D-- 74 (167)
Q Consensus 18 ~~~~v~~G~~~~l~C~a------~~~~~~~~~~i~W~k~~~~~~~~~~~~------~v--------~~g~y~c~~~-~-- 74 (167)
.+..+.+|+++.|.|.+ .+.|. +.++|+|++. .+..+..+ .+ ..|.|+|.+. +
T Consensus 111 ~~~~~~~g~~v~l~C~~~~~~~~~g~p~---~~i~W~k~~~-~l~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~~n~~ 186 (315)
T 1itb_B 111 FKQKLPVAGDGGLVCPYMEFFKNENNEL---PKLQWYKDCK-PLLLDNIHFSGVKDRLIVMNVAEKHRGNYTCHASYTYL 186 (315)
T ss_dssp EEEEEETTSCEEEECSSCTTTCTTTTCC---CCCEEEETTE-ECCCCSSSEEEETTEEEESSCCGGGCEEEEEEEEEEET
T ss_pred cceEEecCCCeEEEEecccccccCCCCC---CEEEEEECCE-ECCCccceEeecCceEEEEeceehhCcEEEEEEEcCCC
Confidence 45678999999999998 56554 4799999854 34221111 11 2699999875 2
Q ss_pred --------------------------------eEEEeCCcEEEEeeeCCccCCcceeEEEEeCCCeeeEEeeeecCCceE
Q psy12724 75 --------------------------------EHVLKGNSAVLKCHIPSFVADYVAVESWISDQGEELFVDMTESTDGKY 122 (167)
Q Consensus 75 --------------------------------~~v~~G~~a~l~C~~~~~~~~p~p~i~W~k~~~~~l~~~~~~~~~~r~ 122 (167)
..+.+|+++.|.|.+. |.|.|.++|+||+ ..+..... ....++
T Consensus 187 g~~~~~~~~~~~~~~~~~~~~~P~~~~~~~~~~~~~~g~~v~l~C~~~---g~P~p~i~W~~~g-~~i~~~~~-~~~~~~ 261 (315)
T 1itb_B 187 GKQYPITRVIEFITLEENKPTRPVIVSPANETMEVDLGSQIQLICNVT---GQLSDIAYWKWNG-SVIDEDDP-VLGEDY 261 (315)
T ss_dssp TEEEEEEEEEEEEEECCCCCCCCEECSCCSEEEECCSSSCEEEEEEEE---ECTTSEEEEEETT-EECCTTCS-SEEEEE
T ss_pred CcEEEEEEEEEEEEecCCCCCCCEEecCCCCcEEEeCCCcEEEEEEEe---cCCCCeeEEEECC-EECCcccc-cccccc
Confidence 1234799999999997 4588999999997 55532100 000123
Q ss_pred EEccC----------CeEEEeecCcCC-CCcceEEEeeecC
Q psy12724 123 LVLPS----------GELHIRDVGPED-GYKSYQCRTKHRL 152 (167)
Q Consensus 123 ~~~~~----------g~L~I~~v~~~D-~~G~Y~C~a~n~~ 152 (167)
....+ +.|.|.+++.+| + |.|+|.|.|..
T Consensus 262 ~~~~~~~~~~~~~~~~~L~i~~v~~~d~~-G~Y~C~a~N~~ 301 (315)
T 1itb_B 262 YSVENPANKRRSTLITVLNISEIESRFYK-HPFTCFAKNTH 301 (315)
T ss_dssp EEECCSSCGGGEEEEEEEEESSCCGGGGT-SCEEEEEECTT
T ss_pred eeeeccCCCceeEEEEEEEEeecCHHHcC-CceEEEEecCC
Confidence 22222 389999999999 9 99999999987
No 84
>4fqp_A Poliovirus receptor; immunoglobulin-like domain, IG domain, viral entry receptor, adhesion; HET: NAG BMA FUC MAN; 3.60A {Homo sapiens} PDB: 1nn8_R 1dgi_R
Probab=99.69 E-value=1.8e-16 Score=125.70 Aligned_cols=133 Identities=17% Similarity=0.204 Sum_probs=91.9
Q ss_pred eceeeEEeEEEEEeCCcEEEEeecCC-CCCCcceeeEEeeCCCceeee-------cCCce----E--------EEeeeEE
Q psy12724 11 QYYEAQVYDVFVIKGNAAVFKCNLPS-FVSDHLDVVSWADTDGGQYQI-------DNQDF----V--------VSQSYTV 70 (167)
Q Consensus 11 ~~~~~~~~~~~v~~G~~~~l~C~a~~-~~~~~~~~i~W~k~~~~~~~~-------~~~~~----v--------~~g~y~c 70 (167)
+.+...+....+..|+.+.+.|.+.+ .|. +.+.|++++...... ++... + ..|.|+|
T Consensus 118 P~~~~~~~~~~~~~~~~~~~~C~~~~~~P~---~~i~W~~~~~~~~~~~~~~~~~~~~~~~~s~l~i~~~~~~d~g~Y~C 194 (313)
T 4fqp_A 118 PQNTAEVQKVQLTGEPVPMARCVSTGGRPP---AQITWHSDLGGMPNTSQVPGFLSGTVTVTSLWILVPSSQVDGKNVTC 194 (313)
T ss_dssp CEEEEEECCBCCCSSCEEEEEEEEEEEBSC---CEEEEEETTCCEEEEEEEECSSTTCEEEEEEEEECCCGGGTTCEEEE
T ss_pred CcceecccceEeecCceEEEEEEccCccCC---cEEEeecCCccccccceeeeecccccccceeeeecccccccCeeEEE
Confidence 34455566666778999999999864 343 589999987643221 11111 1 1488999
Q ss_pred EecC----------------------------eEEEeCCcEEEEeeeCCccCCcce-eEEEEeCCCeeeEEeeeecCCce
Q psy12724 71 NIMD----------------------------EHVLKGNSAVLKCHIPSFVADYVA-VESWISDQGEELFVDMTESTDGK 121 (167)
Q Consensus 71 ~~~~----------------------------~~v~~G~~a~l~C~~~~~~~~p~p-~i~W~k~~~~~l~~~~~~~~~~r 121 (167)
.+.+ ..+..|+++.|.|.+. |+|.| .++|+|++ ..+. ..
T Consensus 195 ~a~n~~~~~~~~~~~~l~V~~~P~v~~~~~~~~~~~~g~~v~l~C~~~---g~P~p~~v~W~~~~-~~l~-------~~- 262 (313)
T 4fqp_A 195 KVEHESFEKPQLLTVNLTVYYPPEVSISGYDNNWYLGQNEATLTCDAR---SNPEPTGYNWSTTM-GPLP-------PF- 262 (313)
T ss_dssp EEECTTSSSCEEEEEECCBCEEEEEEEECCCSCEETTCCCEEEEEEEE---EESCCCEEEEEETT-BSCC-------TT-
T ss_pred EEEccCcCccceeeeecccccCCccccccccceeecCCCeEEEEEEec---CCCCCcEEEEEECC-EECC-------Cc-
Confidence 8743 1123588999999997 45888 59999998 4542 11
Q ss_pred EEEccCCeEEEeecCcCCCCcceEEEeeecC---cceEEEee
Q psy12724 122 YLVLPSGELHIRDVGPEDGYKSYQCRTKHRL---TGETRLSA 160 (167)
Q Consensus 122 ~~~~~~g~L~I~~v~~~D~~G~Y~C~a~n~~---~~~~~l~~ 160 (167)
....++.|.|.+++.+|+ |.|+|.|.|.. +..+.|.+
T Consensus 263 -~~~~~~~L~i~~v~~~d~-G~Y~C~a~N~~G~~~~~~~l~V 302 (313)
T 4fqp_A 263 -AVAQGAQLLIRPVDKPIN-TTLICNVTNALGARQAELTVQV 302 (313)
T ss_dssp -EEEETTEEEECCCSSCCE-EEEEEEEECSSCEEEEEEEEEE
T ss_pred -eEEeCCEEEECcCChhhC-EEEEEEEEeCCCcEEEEEEEEE
Confidence 123467999999999999 99999999987 33445554
No 85
>3esu_F Antibody 14B7* light chain and antibody 14B7* heavy chain linked with A synthetic...; single-chain FV, monoclonal antibody, immunoglobulin; 1.30A {Mus musculus} PDB: 3et9_F 3esv_F 3etb_F 1h8n_A 1h8s_A* 1h8o_A*
Probab=99.69 E-value=1.2e-15 Score=117.38 Aligned_cols=133 Identities=14% Similarity=0.221 Sum_probs=89.4
Q ss_pred eeeEEeEEEEEeCCcEEEEeecCCCCCCcceeeEEeeCCC-c---eeee-c-------CCc----------eE-------
Q psy12724 13 YEAQVYDVFVIKGNAAVFKCNLPSFVSDHLDVVSWADTDG-G---QYQI-D-------NQD----------FV------- 63 (167)
Q Consensus 13 ~~~~~~~~~v~~G~~~~l~C~a~~~~~~~~~~i~W~k~~~-~---~~~~-~-------~~~----------~v------- 63 (167)
+...|.++.+.+|+++.|.|.+.+.+.+ .+.|+|++. . .+.. + ..+ .+
T Consensus 7 v~~~p~~~~v~~G~~v~L~C~~~~~~~~---~i~W~k~~~~~~~~~l~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~ 83 (250)
T 3esu_F 7 LIQSTSSLSASLGDRVTISCRASQDIRN---YLNWYQQKPDGTVKLLIYYTSRLQSGVPSRFSGSGSGTDYSLTISNLEQ 83 (250)
T ss_dssp EECSCSEEEECTTCCEEEEEEESSCCTT---CEEEEEECTTSCEEEEEETTTEECTTCCTTEEEEEETTEEEEEESSCCG
T ss_pred EEecCCEEEeeCCCcEEEEEEecccCCc---eEEEEEECCCCCCEEEEEEeCCCCCCCCCCEEEeCCCCEEEEEEccCCh
Confidence 4456778899999999999999988764 799998531 1 0100 0 011 11
Q ss_pred -EEeeeEEEecC---------------------------------------------eEEEeCCcEEEEeeeCCccCCcc
Q psy12724 64 -VSQSYTVNIMD---------------------------------------------EHVLKGNSAVLKCHIPSFVADYV 97 (167)
Q Consensus 64 -~~g~y~c~~~~---------------------------------------------~~v~~G~~a~l~C~~~~~~~~p~ 97 (167)
.+|.|.|.+.+ ..+.+|+++.|.|.+.+. ..+.
T Consensus 84 ~D~G~Y~C~~~n~~~~~~~~~~~l~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~G~~v~L~C~~~~~-~~~~ 162 (250)
T 3esu_F 84 EDIGTYFCQQGNTLPWTFGGGTKLEIRRGGGGSGGGGSGGGGSGGGGSEVQLQQSGPELVKPGASVKISCKDSGY-AFSS 162 (250)
T ss_dssp GGCEEEEEEECSSSSCEECCCEEEEEC------------------------CEECCCEEECTTCCEEEEEECCST-TGGG
T ss_pred hhCEEEEEEEeeCCCceECCCEEEEEECCCCcccccccccccccCcccceEEecCCceEEcCCceEEEEEEecCC-cccC
Confidence 27999998732 123579999999999753 1237
Q ss_pred eeEEEEeCC-CeeeEEe--e---------eecCCceEEEccCC-----eEEEeecCcCCCCcceEEEeee
Q psy12724 98 AVESWISDQ-GEELFVD--M---------TESTDGKYLVLPSG-----ELHIRDVGPEDGYKSYQCRTKH 150 (167)
Q Consensus 98 p~i~W~k~~-~~~l~~~--~---------~~~~~~r~~~~~~g-----~L~I~~v~~~D~~G~Y~C~a~n 150 (167)
|.+.|+|+. +..+... . .....+|+.+..++ .|.|.+++.+|+ |.|.|.|.|
T Consensus 163 ~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~I~~v~~~Ds-G~Y~C~~~~ 231 (250)
T 3esu_F 163 SWMNWVKQRPGQGPEWIGRIYPGDGDTNYNGKFKGKATLTADKSSSTAYMQLSSLTSVDS-AVYFCARSG 231 (250)
T ss_dssp SEEEEEEECTTSCCEEEEEEETTTTEEEECGGGTTTEEEEEEGGGTEEEEEECSCCGGGC-EEEEEEEEC
T ss_pred CEEEEEEECCCCCcEEEEEEeccCCccccCccccceEEEEecCCCCeEEEEECCCCcccC-EEEEEEEec
Confidence 899999972 1222110 0 00123677776443 699999999999 999999997
No 86
>1ry7_B FGFR-3, fibroblast growth factor receptor 3; FGF-FGFR complex, beta trefoil, IG domain, growth factor/growth factor receptor complex; 3.20A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4
Probab=99.68 E-value=3e-16 Score=124.93 Aligned_cols=131 Identities=18% Similarity=0.295 Sum_probs=90.6
Q ss_pred eEEEEEeCCcEEEEeecCCCCCCcceeeEEeeCCCceeeecC----------CceE--------EEeeeEEEecC-----
Q psy12724 18 YDVFVIKGNAAVFKCNLPSFVSDHLDVVSWADTDGGQYQIDN----------QDFV--------VSQSYTVNIMD----- 74 (167)
Q Consensus 18 ~~~~v~~G~~~~l~C~a~~~~~~~~~~i~W~k~~~~~~~~~~----------~~~v--------~~g~y~c~~~~----- 74 (167)
....+.+|+++.|.|.+.+.|. +.+.|+|++. .+..+. ...+ ..|.|+|.+.+
T Consensus 131 ~~~~v~~g~~v~l~C~~~g~p~---~~v~W~~~~~-~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~n~~g~~ 206 (334)
T 1ry7_B 131 KLLAVPAANTVRFRCPAAGNPT---PSISWLKNGR-EFRGEHRIGGIKLRHQQWSLVMESVVPSDRGNYTCVVENKFGSI 206 (334)
T ss_dssp CEEEEETTCCEEEECCCCCSSC---CEEECCBTTB-CCCTTSSTTCCCCCTTTTEEEECSCCGGGCCCEEEEEEETTEEE
T ss_pred eeEEecCCCcEEEEEEccCCCC---CeEEEEECCE-ECcccccccceecccceEEEEECCCCcccCEEEEEEEEeCCCCE
Confidence 3567889999999999998865 4799999854 332210 0111 27999997632
Q ss_pred -------------------------eEEEeCCcEEEEeeeCCccCCcceeEEEEe----CCCeeeEEeeeecCCceEEEc
Q psy12724 75 -------------------------EHVLKGNSAVLKCHIPSFVADYVAVESWIS----DQGEELFVDMTESTDGKYLVL 125 (167)
Q Consensus 75 -------------------------~~v~~G~~a~l~C~~~~~~~~p~p~i~W~k----~~~~~l~~~~~~~~~~r~~~~ 125 (167)
..+.+|+++.|.|.+. ++|.|.++|+| |+ ..+... ...++.+.
T Consensus 207 ~~~~~l~V~~~~~~~p~~~~~~~~~~~~~~G~~v~l~C~~~---g~p~p~v~W~~~~~~~g-~~~~~~----~~~~~~~~ 278 (334)
T 1ry7_B 207 RQTYTLDVLERSPHRPILQAGLPANQTAVLGSDVEFHCKVY---SDAQPHIQWLKHVEVNG-SKVGPD----GTPYVTVL 278 (334)
T ss_dssp EEEEEEEEECCCCSSCBCCTTCSCCEEEESSCCEEECCCCB---CSSCEEEEEEECCCGGG-CSBCTT----SSBCCCCC
T ss_pred EEEEEEEEecCCCCCCceEecCCCceEEeCCCCEEEEEEEe---cCCCCeEEEEECCcCCC-ccccCC----CCeeEEEe
Confidence 3456799999999997 45999999999 44 344211 11122222
Q ss_pred cC----------CeEEEeecCcCCCCcceEEEeeecC---cceEEEeee
Q psy12724 126 PS----------GELHIRDVGPEDGYKSYQCRTKHRL---TGETRLSAT 161 (167)
Q Consensus 126 ~~----------g~L~I~~v~~~D~~G~Y~C~a~n~~---~~~~~l~~~ 161 (167)
.+ +.|.|.+++.+|+ |.|+|.|.|.. ...+.|.+.
T Consensus 279 ~~~~~~~~~~~~~~L~i~~v~~~d~-G~Y~C~a~N~~G~~~~~~~l~V~ 326 (334)
T 1ry7_B 279 KTAGANTTDKELEVLSLHNVTFEDA-GEYTCLAGNSIGFSHHSAWLVVL 326 (334)
T ss_dssp CCSSCSCSCTTCCCEEECSCCTTSC-SEEEEEEEESSCCEEEEEEEEEE
T ss_pred ecCccccccccccEEEEccCCHHHC-EEEEEEEeCCCCeEEEEEEEEEE
Confidence 22 2799999999998 99999999987 334455553
No 87
>2y25_A Myomesin; structural protein, sarcomere, M-BAND, immunoglobulin-like D; 3.50A {Homo sapiens}
Probab=99.67 E-value=3.4e-16 Score=123.21 Aligned_cols=130 Identities=12% Similarity=0.181 Sum_probs=92.5
Q ss_pred eceeeEEeEEEEEeCCcEEEEeecCCCCCCcceeeEEeeCCCceeeecCC-------ceE--------EEeeeEEEecCe
Q psy12724 11 QYYEAQVYDVFVIKGNAAVFKCNLPSFVSDHLDVVSWADTDGGQYQIDNQ-------DFV--------VSQSYTVNIMDE 75 (167)
Q Consensus 11 ~~~~~~~~~~~v~~G~~~~l~C~a~~~~~~~~~~i~W~k~~~~~~~~~~~-------~~v--------~~g~y~c~~~~~ 75 (167)
+.|. .+.+..+.+|+++.|.|.+.+.... +.+.|+|++. .+..+.. ..+ ..|.|+|.+.+.
T Consensus 8 P~~~-~~~~~~v~~G~~v~l~C~~~~~~p~--~~v~W~~~~~-~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~~~n~ 83 (317)
T 2y25_A 8 PHFV-EYLSWEVTGECNVLLKCKVANIKKE--THIVWYKDER-EISVDEKHDFKDGICTLLITEFSKKDAGIYEVILKDD 83 (317)
T ss_dssp CEEE-EEEEEEEETTTEEEEEEEEESCCTT--CEEEEEETTE-EECCSCC-----CCEEEEETTCCSTTCSCEEEEEESS
T ss_pred CcEe-eeeeEEECCCCeEEEEEEEcCCCCC--CEEEEEECCe-EcCCCCcEEEECCeEEEEEccCCcccCeEEEEEEECC
Confidence 4465 5557999999999999999877322 4799999854 3432111 111 279999998541
Q ss_pred -------------------------EEEeCCcEEEEeeeCCcc-------CCcceeEEEEeCCCeeeEEeeeecCCceEE
Q psy12724 76 -------------------------HVLKGNSAVLKCHIPSFV-------ADYVAVESWISDQGEELFVDMTESTDGKYL 123 (167)
Q Consensus 76 -------------------------~v~~G~~a~l~C~~~~~~-------~~p~p~i~W~k~~~~~l~~~~~~~~~~r~~ 123 (167)
.+..|+.+.|.|.+.+.. +.|.|.++|+|++ ..+. .+.++.
T Consensus 84 ~g~~~~~~~l~v~~~~~~~~~~~~~~~~~g~~~~l~c~~~~~~l~c~~~~~~p~~~i~W~~~~-~~~~------~~~~~~ 156 (317)
T 2y25_A 84 RGKDKSRLKLVDEAFKELMMEVCKKIALSATDLKIQSTAEGIQLYSFVTYYVEDLKVNWSHNG-SAIR------YSDRVK 156 (317)
T ss_dssp SCEEEEEECCSTHHHHHHHHHHHHHHHTCBCCCEEEECSSEEEEEEEBSSCCSSCEEEEEESS-SBCC------CCSSEE
T ss_pred CCcEEEEEEEEEecCccccccCCceecccCCCeEEEeeccccEEEEEeccCCCCcEEEEEECC-EECC------CCCCeE
Confidence 123788888888876310 1588999999998 4553 245565
Q ss_pred EccCC---eEEEeecCcCCCCcceEEEeeecC
Q psy12724 124 VLPSG---ELHIRDVGPEDGYKSYQCRTKHRL 152 (167)
Q Consensus 124 ~~~~g---~L~I~~v~~~D~~G~Y~C~a~n~~ 152 (167)
+..++ .|.|.+++.+|+ |.|+|.|.|..
T Consensus 157 ~~~~~~~~~L~i~~~~~~d~-G~Y~C~a~n~~ 187 (317)
T 2y25_A 157 TGVTGEQIWLQINEPTPNDK-GKYVMELFDGK 187 (317)
T ss_dssp EEECSSEEEEEEESCCGGGC-EEEEEEEECSS
T ss_pred EeccCCEEEEEECcCCcccC-eeEEEEEEeCC
Confidence 55443 399999999999 99999999976
No 88
>3qs9_E FL cytokine receptor; immunoglobulin-like domain, four-helical bundle cytokine, hematopoietic cytokine-receptor complex, cell surface, EXTR complex; 7.80A {Homo sapiens}
Probab=99.67 E-value=1.4e-16 Score=136.72 Aligned_cols=121 Identities=8% Similarity=0.062 Sum_probs=90.6
Q ss_pred EEeEEEEEeCCcEEEEeecC-CCCCCcceeeEEeeCCCceeeec---------CCc------eE--------EEeeeEEE
Q psy12724 16 QVYDVFVIKGNAAVFKCNLP-SFVSDHLDVVSWADTDGGQYQID---------NQD------FV--------VSQSYTVN 71 (167)
Q Consensus 16 ~~~~~~v~~G~~~~l~C~a~-~~~~~~~~~i~W~k~~~~~~~~~---------~~~------~v--------~~g~y~c~ 71 (167)
.+.+..+.+|+++.|.|.+. +.|. +.++|+|++.. +... ..+ .+ .+|.|+|.
T Consensus 233 ~p~~~~v~~G~~v~L~C~~~~g~p~---p~i~W~k~g~~-l~~~~~~~~~~~~~~~~~~~~~~L~I~~v~~~DsG~Y~C~ 308 (527)
T 3qs9_E 233 TLPQLFLKVGEPLWIRCKAVHVNHG---FGLTWELENKA-LEEGNYFEMSTYSTNRTMIRILFAFVSSVARNDTGYYTCS 308 (527)
T ss_dssp SCCEEEECTTSCEEEEEEEEESSSC---CCEEEECSSSC-CCGGGEEEEEEEETTTEEEEEEEEEESSCCGGGCEEEEEE
T ss_pred CCCceEEeCCCeEEEEEEEccCCCC---eEEEEEECCEE-CCCCceeeeeeeccCcceeeEEEEEEccCCcccCeEEEEE
Confidence 45688899999999999997 6654 47999999653 2110 010 01 27999998
Q ss_pred ecC------------------------eEEEeCCcEEEEeeeCCccCCcceeEEEEeCCCeeeEEeeeecCCceEEEccC
Q psy12724 72 IMD------------------------EHVLKGNSAVLKCHIPSFVADYVAVESWISDQGEELFVDMTESTDGKYLVLPS 127 (167)
Q Consensus 72 ~~~------------------------~~v~~G~~a~l~C~~~~~~~~p~p~i~W~k~~~~~l~~~~~~~~~~r~~~~~~ 127 (167)
+.+ ..+.+|+++.|.|.+.+ .|.|.++|+||+ ..+.. ..++ ...+
T Consensus 309 a~N~~~~~~~L~V~~~p~i~~~~~~~~~~v~~G~~v~L~C~~~g---~P~p~i~W~k~g-~~l~~------~~~~-~~~~ 377 (527)
T 3qs9_E 309 SSKHPSQSALVTIVEKGFINATNSSEDYEIDQYEEFCFSVRFKA---YPQIRCTWTFSR-KSFPC------EQKG-LDNG 377 (527)
T ss_dssp ETTEEEEEEEEEEC--CEEECCCSCCEECCCTTCCCCEEEEEEE---ESCCEEEEEETT-EEEEC------BCCB-CSSS
T ss_pred EEeCCCceEEEEEEccCccccccCcccEEEcCCCeEEEEEEEEe---cCCCEEEEEECC-EECcC------Cccc-ccCC
Confidence 755 12346999999999985 489999999997 56632 2232 2356
Q ss_pred CeEEEeecCcCCCCcceEEEeeecC
Q psy12724 128 GELHIRDVGPEDGYKSYQCRTKHRL 152 (167)
Q Consensus 128 g~L~I~~v~~~D~~G~Y~C~a~n~~ 152 (167)
+.|.|.+++.+|+ |.|+|.|.|..
T Consensus 378 ~~L~I~~v~~~D~-G~YtC~A~N~~ 401 (527)
T 3qs9_E 378 YSISKFCNHKHQP-GEYIFHAENDD 401 (527)
T ss_dssp SEEEEECCCTTCC-SCEEEEEEETT
T ss_pred cEEEEecCCcccC-EEEEEEEEeCC
Confidence 7899999999999 99999999987
No 89
>3auv_A SC-DSFV derived from the G6-FAB; SC-DSFV (disulfide-stabilized SCFV), SCFV, monovalent antibo antibody engineering, immune system; 2.40A {Homo sapiens} PDB: 2kh2_B 3iy0_L
Probab=99.67 E-value=1.8e-15 Score=118.79 Aligned_cols=147 Identities=16% Similarity=0.230 Sum_probs=97.4
Q ss_pred eceeeEEeEEEEEeCCcEEEEeecCCCCCCcceeeEEeeCCC-c---eeeec--------CCc----------eE-----
Q psy12724 11 QYYEAQVYDVFVIKGNAAVFKCNLPSFVSDHLDVVSWADTDG-G---QYQID--------NQD----------FV----- 63 (167)
Q Consensus 11 ~~~~~~~~~~~v~~G~~~~l~C~a~~~~~~~~~~i~W~k~~~-~---~~~~~--------~~~----------~v----- 63 (167)
..+...|.++.+.+|+++.|.|.+.+.+. +.+.|+|++. . .+... ..| .+
T Consensus 13 ~~v~~~p~~~~v~~G~~v~L~C~~~~~p~---~~i~W~r~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v 89 (276)
T 3auv_A 13 IQMTQSPSSLSASVGDRVTITCRASQDVS---TAVAWYQQKPGKAPKLLIYSASFLYSGVPSRFSGSGSGTDFTLTISSL 89 (276)
T ss_dssp CCEEEECSEEECCTTCCEEEEEEESSCCT---TCEEEEEECTTSCCEEEEETTTEECTTCCTTEEEEEETTEEEEEESSC
T ss_pred eeEEeCCCeEEEcCCCCEEEEeEcCCCCC---CcEEEEEECCCCCCEEEEEEcCccCCCCCCCEEEeccCCeEEEEEccC
Confidence 34777888999999999999999988764 4799998642 1 11100 011 11
Q ss_pred ---EEeeeEEEecC----------------------------------------eEEEeCCcEEEEeeeCCccCCcceeE
Q psy12724 64 ---VSQSYTVNIMD----------------------------------------EHVLKGNSAVLKCHIPSFVADYVAVE 100 (167)
Q Consensus 64 ---~~g~y~c~~~~----------------------------------------~~v~~G~~a~l~C~~~~~~~~p~p~i 100 (167)
.+|.|.|.+.+ ..+.+|+++.|.|.+.+. ..+.|.+
T Consensus 90 ~~~DsG~Y~C~~~n~~~~~~~~~~~l~V~~~~~~~~~~~~~~~~p~~~~~~p~~~~v~~G~~v~L~C~~~g~-~~~~~~v 168 (276)
T 3auv_A 90 QPEDFATYYCQQHYTTPPTFGCGTKVEIKGGGGGSIEGRSGGGGSEVQLVESGGGLVQPGGSLRLSCAASGF-TISDYWI 168 (276)
T ss_dssp CGGGCEEEEEEECSSSSCCCCCCEEEEC-----------------CCEEEEECCEEECTTCCEEEEEEEESS-CGGGSEE
T ss_pred ChhhCEEEEEEEecCCcccccCCEEEEEecCCCccccccccccCcceEEECCCceEecCCCeEEEEEEecCc-cCCCCEE
Confidence 27999998632 123469999999999753 1116899
Q ss_pred EEEeCC-Ceee--EEee---------eecCCceEEEccC-----CeEEEeecCcCCCCcceEEEeeec--------Ccce
Q psy12724 101 SWISDQ-GEEL--FVDM---------TESTDGKYLVLPS-----GELHIRDVGPEDGYKSYQCRTKHR--------LTGE 155 (167)
Q Consensus 101 ~W~k~~-~~~l--~~~~---------~~~~~~r~~~~~~-----g~L~I~~v~~~D~~G~Y~C~a~n~--------~~~~ 155 (167)
+|+|++ +..+ .... .+...+||.+..+ ..|.|.+++.+|+ |.|.|.|.|. +...
T Consensus 169 ~W~k~~~g~~~~~l~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~I~~v~~~Ds-G~Y~C~a~n~~~~~~~~~fg~g 247 (276)
T 3auv_A 169 HWVRQAPGKCLEWVAGITPAGGYTYYADSVKGRFTISADTSKNTAYLQMNSLRAEDT-AVYYCARFVFFLPYAMDYWGQG 247 (276)
T ss_dssp EEEEECTTCCEEEEEEECGGGCCEEECTTTTTTEEEEEEGGGTEEEEEECSCCGGGC-EEEEEEEECSSTTCSCCCBCCC
T ss_pred EEEEcCCCCCcEEEEEEeccCCccccccccCCcEEEEecCCCcEEEEEECCCChhHC-EEEEEEEEcCcCCcCceEECCC
Confidence 999963 1111 1000 0012457776643 2799999999999 9999999997 2445
Q ss_pred EEEeeeC
Q psy12724 156 TRLSATK 162 (167)
Q Consensus 156 ~~l~~~~ 162 (167)
++|++.+
T Consensus 248 t~l~V~~ 254 (276)
T 3auv_A 248 TLVTVSS 254 (276)
T ss_dssp EEEEEC-
T ss_pred EEEEEcc
Confidence 6777644
No 90
>4dep_C Interleukin-1 receptor accessory protein; B-trefoil, immunoglobulin, immune system, extracellular; HET: NAG; 3.10A {Homo sapiens} PDB: 3o4o_B*
Probab=99.67 E-value=2.7e-16 Score=126.15 Aligned_cols=127 Identities=11% Similarity=0.106 Sum_probs=88.7
Q ss_pred EeEEEEEeCCcEEEEeecCCCCC--------CcceeeEEeeCCCc-----eee--ecCCc------eE--------EEee
Q psy12724 17 VYDVFVIKGNAAVFKCNLPSFVS--------DHLDVVSWADTDGG-----QYQ--IDNQD------FV--------VSQS 67 (167)
Q Consensus 17 ~~~~~v~~G~~~~l~C~a~~~~~--------~~~~~i~W~k~~~~-----~~~--~~~~~------~v--------~~g~ 67 (167)
.+++.|.+|+++.|.|.+.+.|. .+.+.+.|+|++.. .+. ....+ .+ .+|.
T Consensus 14 ~~~v~v~~G~~v~L~C~~~~~p~~~~ys~~~~~~~~i~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~D~G~ 93 (349)
T 4dep_C 14 MRQIQVFEDEPARIKCPLFEHFLKFNYSTAHSAGLTLIWYWTRQDRDLEEPINFRLPENRISKEKDVLWFRPTLLNDTGN 93 (349)
T ss_dssp CCCCEEETTSCEEEECTCCCCCSSSCHHHHHHTTCEEEEEEEESSCCCEEECCCCCGGGCEEEETTEEEESSCCGGGCEE
T ss_pred eeeEEEecCCeEEEEccccccccccccccccCCCceEEEEECCCCCcccccccccccCceEeecCCEEEEccCChhhCEE
Confidence 45778999999999999998652 11258999998642 111 00111 11 2799
Q ss_pred eEEEecC-----------------------------eEEEeCCcEEEEeeeCCc--cCCcceeEEEEeCCCeeeEEeeee
Q psy12724 68 YTVNIMD-----------------------------EHVLKGNSAVLKCHIPSF--VADYVAVESWISDQGEELFVDMTE 116 (167)
Q Consensus 68 y~c~~~~-----------------------------~~v~~G~~a~l~C~~~~~--~~~p~p~i~W~k~~~~~l~~~~~~ 116 (167)
|+|.+.+ ..+.+|+++.|.|.+... .+.|.|.++|+||+ ..+.
T Consensus 94 Y~C~a~n~~~~~~~~~~l~V~~~~~~~~~~~~~~~~~~~~~g~~~~l~C~~~~~~~~g~p~~~v~W~k~~-~~l~----- 167 (349)
T 4dep_C 94 YTCMLRNTTYCSKVAFPLEVVQKDSCFNSPMKLPVHKLYIEYGIQRITCPNVDGYFPSSVKPTITWYMGC-YKIQ----- 167 (349)
T ss_dssp EEEEEECSSCEEEEEEEEEEECCCTTSCCSCCCCEEEEETTCSEEEEECCSCTTSSCTTSCCEEEEEETT-EECC-----
T ss_pred EEEEEecCCceEEEEEEEEEecCCcccCcccccCcceeeecCccEEEEcCCCcccccCCCCceEEEeeCC-EECC-----
Confidence 9998743 134569999999985211 25699999999997 4542
Q ss_pred cCCceEEEccCCeEEEeecCcCCCCcceEEEeeecC
Q psy12724 117 STDGKYLVLPSGELHIRDVGPEDGYKSYQCRTKHRL 152 (167)
Q Consensus 117 ~~~~r~~~~~~g~L~I~~v~~~D~~G~Y~C~a~n~~ 152 (167)
...++.. .+..|.|.+++.+|+ |.|+|.|.|..
T Consensus 168 -~~~~~~~-~~~~L~i~~v~~~d~-G~Y~C~a~n~~ 200 (349)
T 4dep_C 168 -NFNNVIP-EGMNLSFLIALISNN-GNYTCVVTYPE 200 (349)
T ss_dssp -SCSSEEE-ETTEEEEESCCGGGC-EEEEEEEEEEE
T ss_pred -Cccceee-cCCEEEEeeeeecCC-cEEEEEEEEee
Confidence 2233332 345799999999999 99999999975
No 91
>2ocw_A Polymeric-immunoglobulin receptor; SC, secretory, antibody, immunity, immune system; NMR {Homo sapiens} PDB: 3chn_S 3cm9_S 3chn_J 3cm9_J
Probab=99.67 E-value=2e-15 Score=128.95 Aligned_cols=143 Identities=15% Similarity=0.191 Sum_probs=97.7
Q ss_pred eEEeEEEEEeCCcEEEEeecCCCCCCcceeeEEeeCCCce----eee--------------------cCCceE-------
Q psy12724 15 AQVYDVFVIKGNAAVFKCNLPSFVSDHLDVVSWADTDGGQ----YQI--------------------DNQDFV------- 63 (167)
Q Consensus 15 ~~~~~~~v~~G~~~~l~C~a~~~~~~~~~~i~W~k~~~~~----~~~--------------------~~~~~v------- 63 (167)
..|+++.+.+|+++.|.|.+.+.+.+..+.+.|+|++... +.. ++...+
T Consensus 5 ~~P~~v~v~~G~~v~L~C~~~~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~g~~~L~I~~v~~ 84 (585)
T 2ocw_A 5 FGPEEVNSVEGNSVSITCYYPPTSVNRHTRKYWCRQGARGGCITLISSEGYVSSKYAGRANLTNFPENGTFVVNIAQLSQ 84 (585)
T ss_pred cCcceeEEecCCcEEEEEeCCCCcCCCcccEEEEeCCCCCCceEEEECCCcccceeeceEEEEecCCCCEEEEEECCCCc
Confidence 4678899999999999999998764333479999986421 100 000011
Q ss_pred -EEeeeEEEecC-------------------------eEEEeCCcEEEEeeeCCccCCcceeEEEEeCCCeeeEEee---
Q psy12724 64 -VSQSYTVNIMD-------------------------EHVLKGNSAVLKCHIPSFVADYVAVESWISDQGEELFVDM--- 114 (167)
Q Consensus 64 -~~g~y~c~~~~-------------------------~~v~~G~~a~l~C~~~~~~~~p~p~i~W~k~~~~~l~~~~--- 114 (167)
.+|.|+|.+.+ ..+.+|+++.|.|.+.+. .|.+.++|+|+++.......
T Consensus 85 ~D~G~Y~C~~~n~~~~~~~~~~l~V~~~p~~~~~~~~~~v~~G~~v~l~C~~~~~--~~~~~v~W~k~~~~~~~~~~~~~ 162 (585)
T 2ocw_A 85 DDSGRYKCGLGINSRGLSFDVSLEVSQGPGLLNDTKVYTVDLGRTVTINCPFKTE--NAQKRKSLYKQIGLYPVLVIDSS 162 (585)
T ss_pred ccCEEEEEEcccCCCCceEEEEEEEecCccccCCCccEEEEcCCCEEEEEEecCC--CCCccEEEEECCCCCceEEecCC
Confidence 37999998632 356789999999999752 35678999999743211000
Q ss_pred ---eecCCceEEEccCC------eEEEeecCcCCCCcceEEEeeecC---cceEEEee
Q psy12724 115 ---TESTDGKYLVLPSG------ELHIRDVGPEDGYKSYQCRTKHRL---TGETRLSA 160 (167)
Q Consensus 115 ---~~~~~~r~~~~~~g------~L~I~~v~~~D~~G~Y~C~a~n~~---~~~~~l~~ 160 (167)
.+...+|+.+..+| .|.|.+++.+|+ |.|+|.|.|.. +..+.|.+
T Consensus 163 ~~~~~~~~~r~~~~~~~~~~~~~~L~I~~v~~~D~-G~Y~C~a~n~~g~~~~~~~l~V 219 (585)
T 2ocw_A 163 GYVNPNYTGRIRLDIQGTGQLLFSVVINQLRLSDA-GQYLCQAGDDSNSNKKNADLQV 219 (585)
T ss_pred cccCccccCcEEEEeccCCCcEEEEEEccCChhHC-eEEEEEeccCCccccceEEEEE
Confidence 00013566666555 699999999999 99999999976 23444444
No 92
>3rjd_A High affinity immunoglobulin gamma FC receptor I; immune system; HET: NAG MAN FUC P33; 2.65A {Homo sapiens}
Probab=99.67 E-value=2.5e-15 Score=115.21 Aligned_cols=127 Identities=17% Similarity=0.182 Sum_probs=89.4
Q ss_pred EeeeceeeEEeEEEEEeCCcEEEEeecCCCCCCcceeeEEeeCCCceeeec---CCceE------EEeeeEEEecC----
Q psy12724 8 VISQYYEAQVYDVFVIKGNAAVFKCNLPSFVSDHLDVVSWADTDGGQYQID---NQDFV------VSQSYTVNIMD---- 74 (167)
Q Consensus 8 v~~~~~~~~~~~~~v~~G~~~~l~C~a~~~~~~~~~~i~W~k~~~~~~~~~---~~~~v------~~g~y~c~~~~---- 74 (167)
|..+.+...+.+..+.+|+++.|.|.+.+... .+.+.|++++. .+... ....+ ..|.|+|.+.+
T Consensus 80 v~~~~~~~~~~~~~~~~g~~v~l~C~~~~~~p--~~~v~W~~~g~-~~~~~~~~~~l~i~~~~~~d~G~Y~C~~~n~~~~ 156 (262)
T 3rjd_A 80 IHRGWLLLQVSSRVFTEGEPLALRCHAWKDKL--VYNVLYYRNGK-AFKFFHWNSNLTILKTNISHNGTYHCSGMGKHRY 156 (262)
T ss_dssp EECSSEEEEESCSEEETTSCEEEEEEEGGGCC--CEEEEEEETTE-EEEEEEECCCEEESSCCGGGCEEEEEEEESSSEE
T ss_pred EeccceEecCCCeEEecCCeEEEEEEccCCCC--CceEEEEECCc-cccccCCCCeEEEEECChhhCEEEEEEEeCCCCc
Confidence 33445666777788999999999999943332 25899999854 34321 11111 27999998732
Q ss_pred -----------------------eEEEeCCcEEEEeeeCCccCCcc-e----eEEEEeCCCeeeEEeeeecCCceEEEcc
Q psy12724 75 -----------------------EHVLKGNSAVLKCHIPSFVADYV-A----VESWISDQGEELFVDMTESTDGKYLVLP 126 (167)
Q Consensus 75 -----------------------~~v~~G~~a~l~C~~~~~~~~p~-p----~i~W~k~~~~~l~~~~~~~~~~r~~~~~ 126 (167)
..+.+|+++.|.|.+.+. |. | .++|++++ ..+... ..
T Consensus 157 ~~~~~~l~V~~~~~~p~~~~~~~~~~~~g~~~~l~C~~~~~---p~~p~~~~~~~w~~~~-~~~~~~-----------~~ 221 (262)
T 3rjd_A 157 TSAGISVTVKELFPAPVLNASVTSPLLEGNLVTLSCETKLL---LQRPGLQLYFSFYMGS-KTLRGR-----------NT 221 (262)
T ss_dssp EEECEEEEEECSSCCCEEEESSCSSEETTCCEEEEEECCCC---CC-----EEEEEEETT-EEEEEE-----------ES
T ss_pred cccceEEEeccCCCCCeEeecCceeecCCCeEEEEeEcccC---CCCCCccEEEEEEeCC-cEeccc-----------CC
Confidence 125689999999999854 43 3 36899987 444311 23
Q ss_pred CCeEEEeecCcCCCCcceEEEeeecCc
Q psy12724 127 SGELHIRDVGPEDGYKSYQCRTKHRLT 153 (167)
Q Consensus 127 ~g~L~I~~v~~~D~~G~Y~C~a~n~~~ 153 (167)
++.|.|.+++.+|+ |.|+|.|.|...
T Consensus 222 ~~~L~i~~v~~~d~-G~Y~C~a~n~~G 247 (262)
T 3rjd_A 222 SSEYQILTARREDS-GLYWCEAATEDG 247 (262)
T ss_dssp CCEEEESSCCGGGC-EEEEEEEEETTS
T ss_pred CceEEEEEechhhC-eEEEEEEEcccC
Confidence 56899999999999 999999999873
No 93
>3p3y_A Neurofascin; IG domains, cell adhesion; HET: NAG; 2.60A {Homo sapiens} PDB: 3p40_A*
Probab=99.66 E-value=9.8e-16 Score=124.39 Aligned_cols=123 Identities=22% Similarity=0.369 Sum_probs=90.6
Q ss_pred EEeEEEEEeCCcEEEEeec-CCCCCCcceeeEEeeCCCceeeecC--------CceE------E-EeeeEEEecC-----
Q psy12724 16 QVYDVFVIKGNAAVFKCNL-PSFVSDHLDVVSWADTDGGQYQIDN--------QDFV------V-SQSYTVNIMD----- 74 (167)
Q Consensus 16 ~~~~~~v~~G~~~~l~C~a-~~~~~~~~~~i~W~k~~~~~~~~~~--------~~~v------~-~g~y~c~~~~----- 74 (167)
.+.+..+.+|+++.|.|.+ .+.+. +.+.|++++...+..+. ...+ . .|.|+|.+.+
T Consensus 122 ~~~~~~v~~G~~v~l~C~~~~~~p~---~~v~W~~~~~~~~~~~~~~~~~~~~~l~i~~v~~~d~~G~Y~C~a~n~~~~~ 198 (404)
T 3p3y_A 122 NLDPVVVQEGAPLTLQCNPPPGLPS---PVIFWMSSSMEPITQDKRVSQGHNGDLYFSNVMLQDMQTDYSCNARFHFTHT 198 (404)
T ss_dssp CCCCEEEETTSCEEECCCCCCCSSC---CEEEEECTTSCBCCCCSSEEECTTSCEEESSCCSGGGSSCBEEEEECTTTCC
T ss_pred CCCCeEEccCCcEEEEeCCCCCCCC---CeEEEeCCCccccCCCCcEEEcCCCcEEEEeeeeccCCcceEEEEEeccccc
Confidence 3455789999999999999 55554 48999998754433211 1111 1 4899998732
Q ss_pred ---------------------------------eEEEeCCcEEEEeeeCCccCCcceeEEEEeCCCeeeEEeeeecCCce
Q psy12724 75 ---------------------------------EHVLKGNSAVLKCHIPSFVADYVAVESWISDQGEELFVDMTESTDGK 121 (167)
Q Consensus 75 ---------------------------------~~v~~G~~a~l~C~~~~~~~~p~p~i~W~k~~~~~l~~~~~~~~~~r 121 (167)
..+.+|+++.|.|.+.+ .|.|.++|+|++ ..+. ...+
T Consensus 199 ~~~~~~~~l~v~~~~~~~~~~p~~~~~~~~~~~~~~~~G~~v~l~C~~~g---~p~~~v~W~~~~-~~~~------~~~~ 268 (404)
T 3p3y_A 199 IQQKNPFTLKVLTTRGVAERTPSFMYPQGTASSQMVLRGMDLLLECIASG---VPTPDIAWYKKG-GDLP------SDKA 268 (404)
T ss_dssp EEECCCBCEEEECCSCCCCCCCCBSSSCSSEEEEEEETTSCEEEECCBCC---SSCCEEEEEETT-BCCC------TTTE
T ss_pred eeccCceeEEEeccCCccccCCccccccCCCCCceEecCCCEEEEEEECC---CCCCcEEEEECC-EECC------CCcc
Confidence 23567999999999984 588999999998 4542 2333
Q ss_pred EEEccCCeEEEeecCcCCCCcceEEEeeecC
Q psy12724 122 YLVLPSGELHIRDVGPEDGYKSYQCRTKHRL 152 (167)
Q Consensus 122 ~~~~~~g~L~I~~v~~~D~~G~Y~C~a~n~~ 152 (167)
.....++.|.|.+++.+|+ |.|+|.|.|..
T Consensus 269 ~~~~~~~~L~i~~~~~~d~-G~Y~C~a~n~~ 298 (404)
T 3p3y_A 269 KFENFNKALRITNVSEEDS-GEYFCLASNKM 298 (404)
T ss_dssp EEEGGGTEEEESSCCGGGC-EEEEEEEECSS
T ss_pred cccccCceEEEccCCHhHC-EEEEEEEEeCC
Confidence 4444578999999999999 99999999986
No 94
>3knb_B Obscurin-like protein 1; IG-like, titin, OBSL1, ATP-binding, calmodulin-BIN cardiomyopathy, disease mutation, immunoglobulin domain; 1.40A {Homo sapiens} PDB: 2wp3_O* 2wwm_C 2wwk_O
Probab=99.66 E-value=2.5e-16 Score=108.34 Aligned_cols=84 Identities=19% Similarity=0.320 Sum_probs=66.4
Q ss_pred eeeEEEecCeEEEeCCcEEEEeeeCCccCCcceeEEEEeCCCeeeEEeeeecCCceEEEccCC---eEEEeecCcCCCCc
Q psy12724 66 QSYTVNIMDEHVLKGNSAVLKCHIPSFVADYVAVESWISDQGEELFVDMTESTDGKYLVLPSG---ELHIRDVGPEDGYK 142 (167)
Q Consensus 66 g~y~c~~~~~~v~~G~~a~l~C~~~~~~~~p~p~i~W~k~~~~~l~~~~~~~~~~r~~~~~~g---~L~I~~v~~~D~~G 142 (167)
+.|.-.+.+..+.+|+++.|.|.+. |+|.|.++|+||+ ..|. .+.|+.+..++ .|.|.+++.+|+ |
T Consensus 14 P~f~~~p~~~~v~~G~~~~l~C~~~---G~P~p~v~W~k~g-~~l~------~~~~~~~~~~~~~~~L~I~~v~~~D~-G 82 (107)
T 3knb_B 14 PCFLRFPRPVRVVSGAEAELKCVVL---GEPPPVVVWEKGG-QQLA------ASERLSFPADGAEHGLLLTAALPTDA-G 82 (107)
T ss_dssp EEEEECCCCEEEETTSCEEEEEEEE---EESCCEEEEEETT-EECC------CCSSEECCEETTEEEEEESSCCGGGC-E
T ss_pred CEEEeCCCcEEEeCCCcEEEEEEEE---EecCCEEEEEECc-cccc------ceeeEEEeecCceEEEEEecCChhhC-E
Confidence 3455566788999999999999997 4599999999997 5653 35677766544 699999999999 9
Q ss_pred ceEEEeeecC---cceEEEee
Q psy12724 143 SYQCRTKHRL---TGETRLSA 160 (167)
Q Consensus 143 ~Y~C~a~n~~---~~~~~l~~ 160 (167)
.|+|.|.|.. +..+.|.+
T Consensus 83 ~Y~C~a~N~~G~~~~~~~l~V 103 (107)
T 3knb_B 83 VYVCRARNAAGEAYAAAAVTV 103 (107)
T ss_dssp EEEEEEEETTEEEEEEEEEEE
T ss_pred EEEEEEEECCCEEEEEEEEEE
Confidence 9999999987 33444444
No 95
>3qs7_E FL cytokine receptor; immunoglobulin-like domain, four-helical bundle cytokine, CY receptor complex, extracellular complex; HET: NAG; 4.30A {Homo sapiens}
Probab=99.66 E-value=4e-16 Score=130.38 Aligned_cols=132 Identities=12% Similarity=0.158 Sum_probs=87.3
Q ss_pred EEEeCCcEEEEeecCCCCCCcceeeEEeeCCCceeee-----cC---CceE----EEeeeEEEecC--------------
Q psy12724 21 FVIKGNAAVFKCNLPSFVSDHLDVVSWADTDGGQYQI-----DN---QDFV----VSQSYTVNIMD-------------- 74 (167)
Q Consensus 21 ~v~~G~~~~l~C~a~~~~~~~~~~i~W~k~~~~~~~~-----~~---~~~v----~~g~y~c~~~~-------------- 74 (167)
.+..|+.+.|.|.|.|.|. |.|+|+|+++..... .+ ...+ ..|.|+|.+.|
T Consensus 150 ~~~~~~~~~L~C~a~G~P~---P~i~W~k~~~~~~~~~~~~~~~~~~~~~~l~~~d~G~Y~C~A~N~~G~~~~~~~~l~V 226 (423)
T 3qs7_E 150 FRKMENQDALVCISESVPE---PIVEWVLCDSQGESCKEESPAVVKKEEKVLHELFGTDIRCCARNELGRECTRLFTIDL 226 (423)
T ss_dssp EEECSSSSCEEEEEEESSC---CEEEEEEC-------------CEEECCSEECCCCSSCEEEEEECSSCEEEEECEEEES
T ss_pred EeccCCceEEEEEEeeecC---CeEEEEECCCCCccccccccccccccceEEecccCeEEEEEEEcCCCCcceeeEEEEE
Confidence 4567999999999998876 489999986532110 00 0111 37889998753
Q ss_pred ----------eEEEeCCcEEEEeeeCCccCCcceeEEEEeCCCeeeEEee----eecCCceEEEccCCeEEEeecCcCCC
Q psy12724 75 ----------EHVLKGNSAVLKCHIPSFVADYVAVESWISDQGEELFVDM----TESTDGKYLVLPSGELHIRDVGPEDG 140 (167)
Q Consensus 75 ----------~~v~~G~~a~l~C~~~~~~~~p~p~i~W~k~~~~~l~~~~----~~~~~~r~~~~~~g~L~I~~v~~~D~ 140 (167)
..+.+|+++.|.|.+.+ .+|.|.++|+|++. .+.... ....+.+. ...++.|.|.+++.+|+
T Consensus 227 ~~~p~~~~~~~~v~~G~~v~L~C~~~g--~~p~p~i~W~k~g~-~l~~~~~~~~~~~~~~~~-~~~~~~L~I~~v~~~D~ 302 (423)
T 3qs7_E 227 NQTPQTTLPQLFLKVGEPLWIRCKAVH--VNHGFGLTWELENK-ALEEGNYFEMSTYSTNRT-MIRILFAFVSSVARNDT 302 (423)
T ss_dssp SSCCCSSTTEEEEETTSCEEEEEEEEE--SSSCCCEEEEESSS-BCCGGGEEEEEEEETTTE-EEEEEEEEESSCCTTTC
T ss_pred ecCCccCCCceEEeCCCeEEEEEEEEc--CCCCcEEEEEECCE-EccccceeecccccCCce-eEEEEEEEEeecCHHHC
Confidence 34578999999999974 25778999999984 442100 00001111 22346799999999999
Q ss_pred CcceEEEeeecCcceEEEee
Q psy12724 141 YKSYQCRTKHRLTGETRLSA 160 (167)
Q Consensus 141 ~G~Y~C~a~n~~~~~~~l~~ 160 (167)
|.|+|.|.|..+..+.|.+
T Consensus 303 -G~Y~C~A~N~~~~~~~L~V 321 (423)
T 3qs7_E 303 -GYYTCSSSKHPSQSALVTI 321 (423)
T ss_dssp -EEEEEEETTEEEEEEEEEE
T ss_pred -EEEEEEEecCCCceEEEEE
Confidence 9999999998444555555
No 96
>2znx_A SCFV; fluorotryptohpan, 5-fluorotryptophan, 19F, single chain FV, allergen, antimicrobial, bacteriolytic enzyme, glycosidase, hydrolase; HET: FTR 1PG; 2.30A {Homo sapiens} PDB: 2znw_A*
Probab=99.66 E-value=2.7e-15 Score=115.51 Aligned_cols=146 Identities=14% Similarity=0.120 Sum_probs=96.4
Q ss_pred ceeeEEeEEEEEeCCcEEEEeecCCCCCCcceeeEEeeCCC-c---eeee--------cCCc----------eE------
Q psy12724 12 YYEAQVYDVFVIKGNAAVFKCNLPSFVSDHLDVVSWADTDG-G---QYQI--------DNQD----------FV------ 63 (167)
Q Consensus 12 ~~~~~~~~~~v~~G~~~~l~C~a~~~~~~~~~~i~W~k~~~-~---~~~~--------~~~~----------~v------ 63 (167)
.+...|.++.+.+|+++.|.|.+.+.+. +.+.|+|++. . .+.. ...| .+
T Consensus 3 ~v~~~p~~~~v~~G~~v~L~C~~~~~~~---~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~ 79 (242)
T 2znx_A 3 VLTQSPATLSVTPGNSVSLSCRASQSIG---NNLHXYQQKSHESPRLLIKYASQSISGIPSRFSGSGSGTDFTLSINSVE 79 (242)
T ss_dssp CEEEECSEEEECTTCCEEEEEEESSCCT---TCEEEEEECTTSCCEEEEETTTEECTTSCTTEEEEEETTEEEEEESSCC
T ss_pred cEEEcCCeEEEcCCCcEEEEEEeCCCCC---ceEEEEEeCCCCCceEEEEeccccCCCCCCCEEEecCCCEEEEEECCCC
Confidence 3567788899999999999999988764 4799998531 1 1110 0011 11
Q ss_pred --EEeeeEEEecC---------------------------------------eEEEeCCcEEEEeeeCCccCCcceeEEE
Q psy12724 64 --VSQSYTVNIMD---------------------------------------EHVLKGNSAVLKCHIPSFVADYVAVESW 102 (167)
Q Consensus 64 --~~g~y~c~~~~---------------------------------------~~v~~G~~a~l~C~~~~~~~~p~p~i~W 102 (167)
.+|.|.|.+.+ ..+.+|+++.|.|.+.+. ..+.|.+.|
T Consensus 80 ~~D~G~Y~C~~~n~~~~~~~~~~~L~V~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~G~~v~L~C~~~g~-~~~~~~v~W 158 (242)
T 2znx_A 80 TEDFGMYFCQQSNSXPYTFGGGTKLEITGGGGSGGGGSGGGGSDIQLQESGPSLVKPSQTLSLTCSVTGD-SITSDYXSX 158 (242)
T ss_dssp GGGCEEEEEEECSSSSCEECCCEEEEEC---------------CCEEEEECCSEECTTSCEEEEEEEESS-CGGGSCEEE
T ss_pred hHHCEEEEEeEecCCceEECCCEEEEEcCCCCCCcccccccccceeeecCCcceecCCCeEEEEEEEEcc-ccCCcceee
Confidence 27999997632 124569999999999743 113578999
Q ss_pred EeCC-CeeeE--Eeee--------ecCCceEEEccC-----CeEEEeecCcCCCCcceEEEeeec--CcceEEEeeeC
Q psy12724 103 ISDQ-GEELF--VDMT--------ESTDGKYLVLPS-----GELHIRDVGPEDGYKSYQCRTKHR--LTGETRLSATK 162 (167)
Q Consensus 103 ~k~~-~~~l~--~~~~--------~~~~~r~~~~~~-----g~L~I~~v~~~D~~G~Y~C~a~n~--~~~~~~l~~~~ 162 (167)
+|++ +..+. -... +...+|+.+..+ +.|.|.+++.+|+ |.|.|.|.|. +..-++|.+.+
T Consensus 159 ~k~~~~~~~~~l~~~~~~g~~~~~~~~~~r~~~~~~~~~~~~~L~I~~v~~~D~-G~Y~C~a~~~~~fG~gt~l~v~~ 235 (242)
T 2znx_A 159 IRKFPGNRLEYMGYVSYSGSTYYNPSLKSRISITRDTSKNQYYLDLNSVTTEDT-ATYYCANXDGDYXGQGTLVTVSA 235 (242)
T ss_dssp EEECTTSCEEEEEEECTTSCEEECGGGTTCEEEEEETTTTEEEEEECSCCGGGC-EEEEEEETTSSCBCCCEEEEECC
T ss_pred EeeCCCCCcEEEEEEecCCccccCccccCcEEEEecCCCCEEEEEECCCCcCcC-EEEEEeccCCcccCCCeEEEEEe
Confidence 9853 12221 0000 012467766532 3799999999999 9999999995 35666776654
No 97
>1p6f_A NKP46, natural cytotoxicity triggering receptor 1; natural cytotoxicity receptor, NK cell receptor, immunoglobulin fold, immune system; 2.20A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4
Probab=99.66 E-value=1.1e-15 Score=118.99 Aligned_cols=134 Identities=11% Similarity=0.046 Sum_probs=91.3
Q ss_pred eceeeEEeEEEEEeCCcEEEEeecCCCCCCcceeeEEeeCCCceeee-c-----CCc-eE--------EEeeeEEEecC-
Q psy12724 11 QYYEAQVYDVFVIKGNAAVFKCNLPSFVSDHLDVVSWADTDGGQYQI-D-----NQD-FV--------VSQSYTVNIMD- 74 (167)
Q Consensus 11 ~~~~~~~~~~~v~~G~~~~l~C~a~~~~~~~~~~i~W~k~~~~~~~~-~-----~~~-~v--------~~g~y~c~~~~- 74 (167)
+.+...|.. .|.+|+++.|.|.+.+.+ +.+.|+|++...... . ... .+ .+|.|+|.+.+
T Consensus 8 P~i~~~P~~-~v~~G~~VtL~C~~~~~~----~~~~w~k~g~~~~~~~~~~~~~~~~~~L~I~~v~~~DsG~Y~C~~~~~ 82 (242)
T 1p6f_A 8 PFIWAEPHF-MVPKEKQVTICCQGNYGA----VEYQLHFEGSLFAVDRPKPPERINKVKFYIPDMNSRMAGQYSCIYRVG 82 (242)
T ss_dssp CEEEEESCS-EEETTCCEEEEEECCTTC----CEEEEEETTEEEEEECCSSCTTCCEEEEEECSCCGGGCEEEEEEEEET
T ss_pred CEEEeeCCC-ccCCCCcEEEEEeeCCCC----cEEEEEECCCccccccccccCCcceeEEEecCCCcccCeEEEEEEecC
Confidence 346677776 899999999999997532 368999986432211 0 011 11 27999997621
Q ss_pred ----------------------------eEEEeCCcEEEEeeeCCccCCcceeEEEEeCCCeeeEEeeeecCCceEEEcc
Q psy12724 75 ----------------------------EHVLKGNSAVLKCHIPSFVADYVAVESWISDQGEELFVDMTESTDGKYLVLP 126 (167)
Q Consensus 75 ----------------------------~~v~~G~~a~l~C~~~~~~~~p~p~i~W~k~~~~~l~~~~~~~~~~r~~~~~ 126 (167)
..+.+|++++|.|.+.+ +.+.+.|+||+ ..+.. .+.....
T Consensus 83 ~~~s~~S~~~~L~V~~~~~~P~i~~~p~~~v~~G~~vtL~C~~~~----~~~~~~w~k~g-~~~~~-------~~~~~~~ 150 (242)
T 1p6f_A 83 ELWSEPSNLLDLVVTEMYDTPTLSVHPGPEVISGEKVTFYCRLDT----ATSMFLLLKEG-RSSHV-------QRGYGKV 150 (242)
T ss_dssp TEECCCCCCEEEEEECCSCCCEEEEESCSEEETTCEEEEEEECTT----SCSEEEEEECS-SSCEE-------EEEECSS
T ss_pred CccccCCcceEEEeecccCCCceEccCCCccCCCCcEEEEEecCC----CCCEEEEEECC-CccCc-------cccCCCc
Confidence 23567999999999863 34588999997 34421 1112234
Q ss_pred CCeEEEeecCcCCCCcceEEEeeecC------cceEEEeeeC
Q psy12724 127 SGELHIRDVGPEDGYKSYQCRTKHRL------TGETRLSATK 162 (167)
Q Consensus 127 ~g~L~I~~v~~~D~~G~Y~C~a~n~~------~~~~~l~~~~ 162 (167)
++.|.|.+++.+|+ |.|+|.|.|.. +..+.|.+.+
T Consensus 151 ~~~l~I~~v~~~d~-G~Y~C~a~n~~~~~s~~S~~~~l~V~~ 191 (242)
T 1p6f_A 151 QAEFPLGPVTTAHR-GTYRCFGSYNNHAWSFPSEPVKLLVTG 191 (242)
T ss_dssp EEEEEEEECCGGGC-EEEEEEEEEETTEECCCCCCEEEEEEC
T ss_pred eEEEEeCCCccccC-EEEEEEEECCCCcccCCCCCEEEEEec
Confidence 56899999999999 99999999852 4445555543
No 98
>2o26_X MAST/stem cell growth factor receptor; stem cell factor, receptor tyrosine kinase, class III, recep ligand complex, cytokine, 4-helix bundle; HET: NAG FUL MAN NDG; 2.50A {Mus musculus}
Probab=99.66 E-value=1.4e-16 Score=124.66 Aligned_cols=127 Identities=15% Similarity=0.219 Sum_probs=88.8
Q ss_pred eEEeEEEEEeCCcEEEEeecCCCCCCcceeeEEeeCCCceeeecC------CceE--------EEe-eeEEEecC-----
Q psy12724 15 AQVYDVFVIKGNAAVFKCNLPSFVSDHLDVVSWADTDGGQYQIDN------QDFV--------VSQ-SYTVNIMD----- 74 (167)
Q Consensus 15 ~~~~~~~v~~G~~~~l~C~a~~~~~~~~~~i~W~k~~~~~~~~~~------~~~v--------~~g-~y~c~~~~----- 74 (167)
..+.+..+.+|+++.|.|.+.+ |. .+.+.|++.++..+..+. ...+ ..| .|+|.+.+
T Consensus 96 ~~~~~~~~~~g~~v~l~C~~~~-p~--~~~v~W~~~~g~~l~~~~~~~~~~~~~L~i~~v~~~d~G~~Y~C~a~n~~~~~ 172 (290)
T 2o26_X 96 LVGLPLFGKEDSDALVRCPLTD-PQ--VSQYSLIECDGKSLPTDLTFVPNPKAGITIKNVKRAYHRLCVRCAAQRDGTWL 172 (290)
T ss_dssp CCCCCEEEETTSCEEECCCBSC-CS--CEEEEEEETTSCCCCTTCEEEEETTTEEEEESCCGGGTTCEEEEEEEETTEEE
T ss_pred ccccceEEecCCeEEEeCcCCC-CC--CceEEEEeCCCcCCCCCCceeeCCCCCEEEecccHHHCCCEEEEEEEECCceE
Confidence 5566788999999999999985 43 368999654555553211 1111 168 99998742
Q ss_pred -------------------------eEEEeCCcEEEEeeeCCccCCccee-EEEEeCCCee---eEEeeeecCCceE---
Q psy12724 75 -------------------------EHVLKGNSAVLKCHIPSFVADYVAV-ESWISDQGEE---LFVDMTESTDGKY--- 122 (167)
Q Consensus 75 -------------------------~~v~~G~~a~l~C~~~~~~~~p~p~-i~W~k~~~~~---l~~~~~~~~~~r~--- 122 (167)
..+.+|+++.|.|.+. +.|.|. ++|+|++... +... ...++
T Consensus 173 ~s~~~~l~V~~~~~~~P~i~~~~~~~~v~~G~~v~l~C~~~---g~p~p~~i~W~~~~~~~~~~~~~~----~~~~~~~~ 245 (290)
T 2o26_X 173 HSDKFTLKVREAIKAIPVVSVPETSHLLKKGDTFTVVCTIK---DVSTSVNSMWLKMNPQPQHIAQVK----HNSWHRGD 245 (290)
T ss_dssp ECCCEEEEEECCCCSCCEEECSCSBCCCCTTCCEEEEEEEE---ESSTTCEEEEEEESSSEEECCCEE----CCEEEEET
T ss_pred EeEEEEEEEEeCCCCCCccccCCCcceEecCCcEEEEEEEe---cCCcceeEEEecCCCCCccceeec----ccccccCc
Confidence 1235799999999998 458886 9999998431 1111 11111
Q ss_pred -EEccCCeEEEeecCcCCCCcceEEEeeecC
Q psy12724 123 -LVLPSGELHIRDVGPEDGYKSYQCRTKHRL 152 (167)
Q Consensus 123 -~~~~~g~L~I~~v~~~D~~G~Y~C~a~n~~ 152 (167)
.....+.|.|.+++.+|+ |.|+|.|.|..
T Consensus 246 ~~~~~~~~L~I~~v~~~d~-G~Y~C~a~N~~ 275 (290)
T 2o26_X 246 FNYERQETLTISSARVDDS-GVFMCYANNTF 275 (290)
T ss_dssp TEEEEEEEEEESSCCSSSC-EEEEEEEECSS
T ss_pred eeeEEEEEEEEcCCCcccC-eEEEEEEeCCC
Confidence 223456899999999999 99999999987
No 99
>3uzq_A Anti-dengue MAB 4E11; dengue antibody neutralization, immune system; HET: MES; 1.60A {Mus musculus} PDB: 3uze_A* 3uyp_A* 3uzv_B 1dzb_A
Probab=99.66 E-value=1e-15 Score=118.35 Aligned_cols=145 Identities=17% Similarity=0.249 Sum_probs=95.0
Q ss_pred eeeEEeEEEEEeCCcEEEEeecCCCCCCcceeeEEeeC-CCcee-------------------------eecCCc---eE
Q psy12724 13 YEAQVYDVFVIKGNAAVFKCNLPSFVSDHLDVVSWADT-DGGQY-------------------------QIDNQD---FV 63 (167)
Q Consensus 13 ~~~~~~~~~v~~G~~~~l~C~a~~~~~~~~~~i~W~k~-~~~~~-------------------------~~~~~~---~v 63 (167)
+..++.++.|.+|+++.|.|.+.+.+.+ .+.+.|+|. .+..+ ..+... .+
T Consensus 4 ~~~~p~~~~v~~G~~v~L~C~~~g~~~~-~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L 82 (253)
T 3uzq_A 4 LLEQSGAELVKPGASVRLSCTASGFNIK-DTYMSWVKQRPEQGLEWIGRIDPANGDTKYDPKFQGKATITADTSSNTAYL 82 (253)
T ss_dssp CEEECCCEEECTTCCEEEEEEECSSCGG-GSCEEEEEECTTCCEEEEEEEETTTTEEEECGGGTTTEEEEEETTTTEEEE
T ss_pred eEecCCCeeecCCCcEEEEEEeeCCccc-CceEEEEEeCCCCCCEEEEEEccCCCcceeCCcCCCcEEEEeecCCCeEEE
Confidence 4567788999999999999999885432 257999983 22111 000100 01
Q ss_pred --------EEeeeEEEecC-----------------------------------------eEEEeCCcEEEEeeeCCccC
Q psy12724 64 --------VSQSYTVNIMD-----------------------------------------EHVLKGNSAVLKCHIPSFVA 94 (167)
Q Consensus 64 --------~~g~y~c~~~~-----------------------------------------~~v~~G~~a~l~C~~~~~~~ 94 (167)
.+|.|.|.+.+ ..+.+|+++.|.|.+.+
T Consensus 83 ~I~~v~~~DsG~Y~C~~~~~~~~~~~~~~~l~V~~~~~~~~~~~~~~~~~~~~v~~~p~~~~v~~G~~v~L~C~~~~--- 159 (253)
T 3uzq_A 83 HLSSLTSGDTAVYYCSRGWEGFAYWGQGTLVTVSAGGGGSGGGGSGGGGSELVMTQTPASLAVSLGQRATISCRASE--- 159 (253)
T ss_dssp EECSCCGGGCEEEEEEECSSSCCEECCCEEEEECSSSCCCCC---------CCEEEECSEEEECTTSCEEEEEEESS---
T ss_pred EeCCCCcccCEEEEEEEeeCCccEECCCcEEEEecCCccccccccCCCcccceEECcCCeEEEeCCCCEEEEEEecC---
Confidence 17999998642 23457999999999984
Q ss_pred Ccce----eEEEEeCCC-eeeE--Eee----eecCCceEEEccC---CeEEEeecCcCCCCcceEEEeeecC----cceE
Q psy12724 95 DYVA----VESWISDQG-EELF--VDM----TESTDGKYLVLPS---GELHIRDVGPEDGYKSYQCRTKHRL----TGET 156 (167)
Q Consensus 95 ~p~p----~i~W~k~~~-~~l~--~~~----~~~~~~r~~~~~~---g~L~I~~v~~~D~~G~Y~C~a~n~~----~~~~ 156 (167)
.|.| .+.|+|++. ..+. -.. .....+|+....+ ..|.|.+++.+|+ |.|.|.|.|.. +..+
T Consensus 160 ~~~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~Ds-G~Y~C~~~n~~~~~fg~gt 238 (253)
T 3uzq_A 160 NVDRYGNSFMHWYQQKAGQPPKLLIYRASNLESGIPARFSGSGSRTDFTLTINPVEADDV-ATYFCQRSNEVPWTFGGGT 238 (253)
T ss_dssp CCEETTEECEEEEEECTTSCCEEEEETTTEECTTCCTTEEEEEETTEEEEEESSCCGGGC-EEEEEEECSSSSCCBCCCE
T ss_pred ccccCCCcEEEEEEECCCCCCEEEEEEccccCCccCCceEEeCCCCEEEEEECCCCHHHC-EEEEEEEccCCCcEECCCE
Confidence 4665 899998521 1111 000 0011356655432 2599999999999 99999999954 5677
Q ss_pred EEeeeC
Q psy12724 157 RLSATK 162 (167)
Q Consensus 157 ~l~~~~ 162 (167)
+|.+.+
T Consensus 239 ~l~v~~ 244 (253)
T 3uzq_A 239 KLEIKR 244 (253)
T ss_dssp EEEECC
T ss_pred EEEEcC
Confidence 777754
No 100
>1vca_A VCAM-D1,2, human vascular cell adhesion molecule-1; immunoglobulin superfamily, integrin-binding, cell adhesion protein; 1.80A {Homo sapiens} SCOP: b.1.1.3 b.1.1.4 PDB: 1ij9_A 1vsc_A
Probab=99.66 E-value=1.1e-15 Score=115.35 Aligned_cols=133 Identities=14% Similarity=0.162 Sum_probs=86.3
Q ss_pred eeeEEeEEEEE-eCCcEEEEeecCCCCCCcceeeEEeeCCCcee----eecCCc-eE--------EEeeeEEEecC----
Q psy12724 13 YEAQVYDVFVI-KGNAAVFKCNLPSFVSDHLDVVSWADTDGGQY----QIDNQD-FV--------VSQSYTVNIMD---- 74 (167)
Q Consensus 13 ~~~~~~~~~v~-~G~~~~l~C~a~~~~~~~~~~i~W~k~~~~~~----~~~~~~-~v--------~~g~y~c~~~~---- 74 (167)
+++.|.+..+. +|+++.|.|.+.+.|. |.+.|.++.+..+ ...+.. .+ ..|.|.|.+.+
T Consensus 3 v~i~p~~~~~~~~G~~v~L~C~~~g~P~---p~i~W~~~~~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~n~~~~ 79 (202)
T 1vca_A 3 IETTPESRYLAQIGDSVSLTCSTTGCES---PFFSWRTQIDSPLNGKVTNEGTTSTLTMNPVSFGNEHSYLCTATCESRK 79 (202)
T ss_dssp EEEESSSEEEEETTSCEEEEEEEESCSS---CEEEEEETTCCCCSSEEEEETTEEEEEESSCCGGGCSEEEEEEEETTEE
T ss_pred EEECCCCcEEEcCCCcEEEEEeecCCCC---CeEEEECCCCCCccceEEEcCCccEEEECcCCHHHCEEEEEEEEECCce
Confidence 45667776665 9999999999998775 4699998532211 111111 11 27999998742
Q ss_pred ---------------------eEEEeCCcEEEEeeeCCccCCcceeEEEEeCCCeeeEEeeeecCC---ceEEEccCCeE
Q psy12724 75 ---------------------EHVLKGNSAVLKCHIPSFVADYVAVESWISDQGEELFVDMTESTD---GKYLVLPSGEL 130 (167)
Q Consensus 75 ---------------------~~v~~G~~a~l~C~~~~~~~~p~p~i~W~k~~~~~l~~~~~~~~~---~r~~~~~~g~L 130 (167)
..+.+|+++.|.|.+.+....+.+.++|+||+ ..+......... ..+. ....|
T Consensus 80 ~~~~~~l~V~~~p~~~~~~~~~~~~~G~~~~L~C~~~~~~p~~~~~i~W~k~~-~~l~~~~~~~~~~~~~~~~--~~~~l 156 (202)
T 1vca_A 80 LEKGIQVEIYSFPKDPEIHLSGPLEAGKPITVKCSVADVYPFDRLEIDLLKGD-HLMKSQEFLEDADRKSLET--KSLEV 156 (202)
T ss_dssp EEEEEEEEEEBCCSCCEEEESSCEETTSCEEEEEEEEEEBSGGGEEEEEEETT-EEEEEEECCSCCSSCCCEE--EEEEE
T ss_pred EeeEEEEEEEeCCCCCEeCCceEEcCCCCEEEEEEECCcCCCCCeEEEEEeCC-eECcccccccccCcCcceE--EEEEE
Confidence 12568999999999975311113578999997 565432100000 0011 12357
Q ss_pred EEeecCcCCCCcceEEEeeecC
Q psy12724 131 HIRDVGPEDGYKSYQCRTKHRL 152 (167)
Q Consensus 131 ~I~~v~~~D~~G~Y~C~a~n~~ 152 (167)
.|......|. |.|+|.|.|.+
T Consensus 157 ~i~~~~~d~~-g~ytC~A~n~~ 177 (202)
T 1vca_A 157 TFTPVIEDIG-KVLVCRAKLHI 177 (202)
T ss_dssp EECCCGGGTT-CEEEEEEEECS
T ss_pred EEEeeeccCC-CeEEEEEEccc
Confidence 8999998898 99999999987
No 101
>3d9a_L Light chain of hyhel10 antibody fragment (FAB); lysozyme, antigen, allergen, antimic bacteriolytic enzyme, glycosidase, hydrolase; 1.20A {Mus musculus} PDB: 3hfm_L 1xgp_A 1xgq_A 1xgr_A 1xgt_A 1dqq_A 1dqm_L 1dqj_A 1nby_A 1nbz_A 1ndg_A 1ndm_A 1xgu_A 1fh5_L 1bm3_L 1opg_L 1mlb_A 1mlc_A 1rih_L 1p2c_A ...
Probab=99.66 E-value=1.5e-16 Score=119.34 Aligned_cols=131 Identities=18% Similarity=0.300 Sum_probs=87.5
Q ss_pred eeeEEeEEEEEeCCcEEEEeecCCCCCCcceeeEEeeCC-Ccee---e------ecC--Cc----------eE-------
Q psy12724 13 YEAQVYDVFVIKGNAAVFKCNLPSFVSDHLDVVSWADTD-GGQY---Q------IDN--QD----------FV------- 63 (167)
Q Consensus 13 ~~~~~~~~~v~~G~~~~l~C~a~~~~~~~~~~i~W~k~~-~~~~---~------~~~--~~----------~v------- 63 (167)
+...|.++.+.+|+++.|.|.+.+.+.+ .+.|+|++ +..+ . ... .+ .+
T Consensus 4 v~~~p~~~~v~~G~~v~L~C~~~~~~~~---~v~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~ 80 (213)
T 3d9a_L 4 LTQSPATLSVTPGNSVSLSCRASQSIGN---NLHWYQQKSHESPRLLIKYASQSISGIPSRFSGSGSGTDFTLSINSVET 80 (213)
T ss_dssp EEEECSEEEECTTCCEEEEEEESSCCTT---CEEEEEECTTSCCEEEEETTTEECTTSCTTEEEEEETTEEEEEESSCCG
T ss_pred EEeCCccEEEeCCCcEEEEEECCCCCCC---CEEEEEeCCCCCcEEEEEEcccccccccccEEEEcCCCEEEEEECCCCh
Confidence 3455788999999999999999987643 69999853 2111 0 000 11 11
Q ss_pred -EEeeeEEEecCe-----------EE------------------EeCCcEEEEeeeCCccCCcce-eEEEEeCCCeeeEE
Q psy12724 64 -VSQSYTVNIMDE-----------HV------------------LKGNSAVLKCHIPSFVADYVA-VESWISDQGEELFV 112 (167)
Q Consensus 64 -~~g~y~c~~~~~-----------~v------------------~~G~~a~l~C~~~~~~~~p~p-~i~W~k~~~~~l~~ 112 (167)
.+|.|+|.+.+. .| ..|+++.|.|.+.+. .|.| .++|+||+ ..+..
T Consensus 81 ~D~G~Y~C~~~~~~~~~~~~~~~l~V~~~~~~p~v~~~~~~~~~~~g~~~~l~C~~~g~--~p~~~~v~W~k~g-~~~~~ 157 (213)
T 3d9a_L 81 EDFGMYFCQQSNSWPYTFGGGTKLEIKRADAAPTVSIFPPSSEQLTSGGASVVCFLNNF--YPKDINVKWKIDG-SERQN 157 (213)
T ss_dssp GGCEEEEEEECSSSSCEECCCEEEEECCCCBCCEEEEECCCHHHHHTTEEEEEEEEEEE--BSSCCEEEEEETT-EEECT
T ss_pred hhCEEEEEeeecCCcceeCCCEEEEEecCCCCceeEeECCChhhcCCCcEEEEEEEeee--cCCceEEEEEcCC-CcCcc
Confidence 279999987431 11 248899999999752 3555 79999997 55531
Q ss_pred e-e-----eecCCceEEEccCCeEEEeecCcCCCCcceEEEeeecC
Q psy12724 113 D-M-----TESTDGKYLVLPSGELHIRDVGPEDGYKSYQCRTKHRL 152 (167)
Q Consensus 113 ~-~-----~~~~~~r~~~~~~g~L~I~~v~~~D~~G~Y~C~a~n~~ 152 (167)
. . ....+++|.. .+.|.|.+++.+|+ |.|+|.|.|..
T Consensus 158 ~~~~~~~~~~~~~~~~~~--~s~L~i~~~~~~d~-G~Y~C~a~n~~ 200 (213)
T 3d9a_L 158 GVLNSWTDQDSKDSTYSM--SSTLTLTKDEYERH-NSYTCEATHKT 200 (213)
T ss_dssp TEEEEECCCCTTTCCEEE--EEEEEEEHHHHHHC-CEEEEEEECTT
T ss_pred eeeecCCCccCCCCCEEE--EEEEEEeccccCCC-CEEEEEEEEcc
Confidence 1 0 0011222321 24799999999999 99999999986
No 102
>2yd9_A Receptor-type tyrosine-protein phosphatase S; hydrolase; HET: NAG B3P; 2.60A {Homo sapiens}
Probab=99.66 E-value=3.2e-16 Score=123.57 Aligned_cols=130 Identities=15% Similarity=0.281 Sum_probs=90.3
Q ss_pred eceeeEEeEEEEEeCCcEEEEeecCCCCCCcceeeEEeeCCCceeeec-----------CCceE------EEeeeEEEec
Q psy12724 11 QYYEAQVYDVFVIKGNAAVFKCNLPSFVSDHLDVVSWADTDGGQYQID-----------NQDFV------VSQSYTVNIM 73 (167)
Q Consensus 11 ~~~~~~~~~~~v~~G~~~~l~C~a~~~~~~~~~~i~W~k~~~~~~~~~-----------~~~~v------~~g~y~c~~~ 73 (167)
+.+...+.+..+.+|+++.|.|.+.+.|. +.+.|+|++. .+... +...+ ..|.|+|.+.
T Consensus 109 p~i~~~~~~~~v~~g~~v~l~C~~~g~p~---~~v~W~k~~~-~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~ 184 (304)
T 2yd9_A 109 PNIDMGPQLKVVERTRTATMLCAASGNPD---PEITWFKDFL-PVDPSASNGRIKQLRSGALQIESSEETDQGKYECVAT 184 (304)
T ss_dssp CEEEECCCCEEEETTSCEEECCEEECSSC---CEEEEEETTE-ECCGGGGTTSEEECTTSCEEECSCCGGGCEEEEEEEE
T ss_pred CeeecCCccEEEeCCCeEEEEEECccCCC---CeEEEEECCE-ECcCCCCcceEEeCCCeEEEEccCCcccCEEEEEEEE
Confidence 34666777888999999999999988775 4799999854 33221 11111 2799999863
Q ss_pred C-----------------------------eEEEeCCcEEEEeeeCCccCCcceeEEEEeCCCeeeEEeeeecCCceEEE
Q psy12724 74 D-----------------------------EHVLKGNSAVLKCHIPSFVADYVAVESWISDQGEELFVDMTESTDGKYLV 124 (167)
Q Consensus 74 ~-----------------------------~~v~~G~~a~l~C~~~~~~~~p~p~i~W~k~~~~~l~~~~~~~~~~r~~~ 124 (167)
+ ..+.+|+++.|.|.+.+ .|.|.++|+|++ ..+.. ..++
T Consensus 185 n~~g~~~~~~~~l~v~~~~~~P~~~~~~~~~~v~~G~~v~l~C~~~g---~p~p~v~W~~~~-~~l~~------~~~~-- 252 (304)
T 2yd9_A 185 NSAGVRYSSPANLYVRVQNVAPRFSILPMSHEIMPGGNVNITCVAVG---SPMPYVKWMQGA-EDLTP------EDDM-- 252 (304)
T ss_dssp ETTEEEECCCEEEEEECCCEEEEEEECCCCBCCCTTCCEEEEEEEEE---ESCCEEEEEETT-EECSC------SSSC--
T ss_pred eCCCCEEeccEEEEEEeeccCCcEEecCCceEEcCCCeEEEEEEEee---eCCCEEEEEECC-EECCC------cccc--
Confidence 2 12357999999999974 589999999997 45531 2222
Q ss_pred ccCCe--EEEeecCcCCCCcceEEEeeecC---cceEEEee
Q psy12724 125 LPSGE--LHIRDVGPEDGYKSYQCRTKHRL---TGETRLSA 160 (167)
Q Consensus 125 ~~~g~--L~I~~v~~~D~~G~Y~C~a~n~~---~~~~~l~~ 160 (167)
.++. |.|.++ +|+ |.|+|.|.|.. +..+.|.+
T Consensus 253 -~~~~~~L~i~~~--~d~-G~Y~C~a~N~~G~~~~~~~l~V 289 (304)
T 2yd9_A 253 -PVGRNVLELTDV--KDS-ANYTCVAMSSLGVIEAVAQITV 289 (304)
T ss_dssp -CBSEEEEEECSC--CSC-EEEEEEEEETTEEEEEEEEEC-
T ss_pred -cCCcEEEEEccc--ccC-EEEEEEEEeCCCcEEEEEEEEE
Confidence 2344 666655 798 99999999987 33445554
No 103
>2ocw_A Polymeric-immunoglobulin receptor; SC, secretory, antibody, immunity, immune system; NMR {Homo sapiens} PDB: 3chn_S 3cm9_S 3chn_J 3cm9_J
Probab=99.66 E-value=3e-15 Score=127.78 Aligned_cols=145 Identities=13% Similarity=0.114 Sum_probs=96.7
Q ss_pred ceeeEEeEEEEEeCCcEEEEeecCCCCCCcceee----EEee--CCC--ceeee-------------------cCCceE-
Q psy12724 12 YYEAQVYDVFVIKGNAAVFKCNLPSFVSDHLDVV----SWAD--TDG--GQYQI-------------------DNQDFV- 63 (167)
Q Consensus 12 ~~~~~~~~~~v~~G~~~~l~C~a~~~~~~~~~~i----~W~k--~~~--~~~~~-------------------~~~~~v- 63 (167)
.+...+.+..+.+|+++.|.|.+.+.+.+ .+ +|.| ++. ..+.. ++...+
T Consensus 333 ~~~~~~~~~~~~~G~~v~l~C~~~~~p~p---~i~~w~~W~~~~~g~~~~l~~~~~~~~~~~~~r~~~~~~~~~g~~~L~ 409 (585)
T 2ocw_A 333 TIPRSPTVVKGVAGSSVAVLCPYNRKESK---SIKYWCLWEGAQNGRCPLLVDSEGWVKAQYEGRLSLLEEPGNGTFTVI 409 (585)
T ss_pred ccccCCcceEEEeCCcEEEEEecCCCCCc---cEEEEEEEEccCCCCCceeeeecceeecccCCCEEEeccCCCcEEEEE
Confidence 35566778889999999999999988764 44 7999 543 12110 011001
Q ss_pred -------EEeeeEEEec------------------------CeEEEeCCcEEEEeeeCCc-cCCcceeEEEEeCCCeeeE
Q psy12724 64 -------VSQSYTVNIM------------------------DEHVLKGNSAVLKCHIPSF-VADYVAVESWISDQGEELF 111 (167)
Q Consensus 64 -------~~g~y~c~~~------------------------~~~v~~G~~a~l~C~~~~~-~~~p~p~i~W~k~~~~~l~ 111 (167)
..|.|+|.+. +..+.+|+++.|.|.+.+. .+.|.|.++|+||+ ..+.
T Consensus 410 I~~v~~~D~G~Y~C~an~~g~~~~~~~l~V~~~~p~~~~~~~~~v~~G~~v~L~C~~~~~~~~~p~~~v~W~k~g-~~~~ 488 (585)
T 2ocw_A 410 LNQLTSRDAGFYWCLTNGDTLWRTTVEIKIIEGEPNLKVPGNVTAVLGETLKVPCHFPCKFSSYEKYWCKWNNTG-CQAL 488 (585)
T ss_pred ECCCChhhCEEEEEcccCCCccceeEEEEEecCccccccCCceeEecCCcEEEEEEecCCCCCCccEEEEEeecC-ceee
Confidence 2799999862 1345789999999999622 25689999999998 4554
Q ss_pred EeeeecCCceEEEcc-C---CeEEEeecCcCCCCcceEEEeeecCc----ceEEEeee
Q psy12724 112 VDMTESTDGKYLVLP-S---GELHIRDVGPEDGYKSYQCRTKHRLT----GETRLSAT 161 (167)
Q Consensus 112 ~~~~~~~~~r~~~~~-~---g~L~I~~v~~~D~~G~Y~C~a~n~~~----~~~~l~~~ 161 (167)
+........++.... + +.|.|.+++.+|+ |.|+|.|.|... ..+.|.+.
T Consensus 489 ~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~-G~Y~C~a~N~~G~~~~~~~~l~V~ 545 (585)
T 2ocw_A 489 PSQDEGPSKAFVNCDENSRLVSLTLNLVTRADE-GWYWCGVKQGHFYGETAAVYVAVE 545 (585)
T ss_pred eccCCCCCcceEEecCcccEEEEEECCCCcccC-eEEEEEeEeCCCccEEEEEEEEEE
Confidence 321000111233332 2 4899999999999 999999999872 23455553
No 104
>3nl4_L Antigen binding fragment, immunoglobulin IGG - LI; FAB, rabbit, conformation-specific, amyloid, immune system; 1.54A {Oryctolagus cuniculus} PDB: 4hbc_L
Probab=99.66 E-value=7.3e-16 Score=115.49 Aligned_cols=128 Identities=16% Similarity=0.261 Sum_probs=88.0
Q ss_pred eeeEEeEEEEEeCCcEEEEeecCCCCCCcceeeEEeeCC-Cc--ee-eec--------CCc----------eE-------
Q psy12724 13 YEAQVYDVFVIKGNAAVFKCNLPSFVSDHLDVVSWADTD-GG--QY-QID--------NQD----------FV------- 63 (167)
Q Consensus 13 ~~~~~~~~~v~~G~~~~l~C~a~~~~~~~~~~i~W~k~~-~~--~~-~~~--------~~~----------~v------- 63 (167)
+...+.++.+.+|+++.|.|.+.+.+. +.+.|+|++ +. .. ... ..+ .+
T Consensus 4 v~~~p~~~~v~~G~~v~L~C~~~~~~~---~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~ 80 (213)
T 3nl4_L 4 MTQTPASVSEPVGGTVTIKCQASQSIS---SYLAWYQQKPGQRPRLLIYETSTLASGVPSRFKGSGSGTDFTLTISDLEC 80 (213)
T ss_dssp EEEECSEEEEETTCCEEEEEEESSCCT---TCEEEEEECTTSCCEEEEETTTEECTTCCTTEEEEEETTEEEEEECSCCG
T ss_pred EEeCCCeEEEcCCCCEEEEEEecCCCC---ceEEEEEECCCCCcEEEEEeCCccCCCCCccEEEecCCCEEEEEECCCCh
Confidence 456688899999999999999998754 479999853 11 11 000 011 11
Q ss_pred -EEeeeEEEecCe-------------EE------------------EeCCcEEEEeeeCCccCCcceeEEEEeCCCeeeE
Q psy12724 64 -VSQSYTVNIMDE-------------HV------------------LKGNSAVLKCHIPSFVADYVAVESWISDQGEELF 111 (167)
Q Consensus 64 -~~g~y~c~~~~~-------------~v------------------~~G~~a~l~C~~~~~~~~p~p~i~W~k~~~~~l~ 111 (167)
.+|.|.|.+.+. .| .+|+++.|.|.+.+ +.|.|.++|+||+ ..+.
T Consensus 81 ~D~G~Y~C~~~~~~~~~~~~~~~~~l~V~~~~~~p~v~~~~~~~~~~~g~~v~l~C~~~g--~~P~~~v~W~k~g-~~~~ 157 (213)
T 3nl4_L 81 ADAATYYCQSTYENPTYVSFGGGTEVGVKGDPVAPTVLIFPPSADLVATGTVTIVCVANK--YFPDVTVTWEVDG-TTQT 157 (213)
T ss_dssp GGCEEEEEEECCSSTTTCEECCCEEEEEECCCBCCEEEEECCCHHHHTTSEEEEEEEEEE--EBSCCEEEEEETT-EECC
T ss_pred HHCEEEEEecCCCCceeEEeCCCeEEEEeCCCcCCeEEEeCCchhhccCCcEeEEEEEec--ccCCcEEEEEeCC-ccCC
Confidence 279999987540 11 24899999999975 1488999999997 4543
Q ss_pred Eee------eecCCceEEEccCCeEEEeecCcCCCCcceEEEee
Q psy12724 112 VDM------TESTDGKYLVLPSGELHIRDVGPEDGYKSYQCRTK 149 (167)
Q Consensus 112 ~~~------~~~~~~r~~~~~~g~L~I~~v~~~D~~G~Y~C~a~ 149 (167)
+.. ....++.|.+ .+.|.|.+++.+|+ |.|+|.|.
T Consensus 158 ~~~~~~~~~~~~~~~~~~~--~s~L~i~~~~~~d~-g~Y~C~a~ 198 (213)
T 3nl4_L 158 TGIENSKTPQNSADCTYNL--SSTLTLTSTEYNSH-KEYTCKVT 198 (213)
T ss_dssp SSEEEEECCCCTTTCCEEE--EEEEEEEHHHHHTC-CEEEEEEE
T ss_pred CCeecccCcccCCCCeEEE--EEEEEecHHHcCCC-CeEEEEEE
Confidence 110 0012344443 25799999999998 99999999
No 105
>4dkd_C Macrophage colony-stimulating factor 1 receptor; dimeric four-helix bundle cytokine, receptor tyrosine kinase glycosylation; HET: NAG BMA; 3.00A {Homo sapiens}
Probab=99.66 E-value=2.4e-16 Score=122.89 Aligned_cols=137 Identities=18% Similarity=0.274 Sum_probs=98.4
Q ss_pred eeeceeeEEeEEEEEeCCcEEEEeecCCCCCCcceeeEEeeCCCceeee--cCCc-eE--------EEeeeEEEecC---
Q psy12724 9 ISQYYEAQVYDVFVIKGNAAVFKCNLPSFVSDHLDVVSWADTDGGQYQI--DNQD-FV--------VSQSYTVNIMD--- 74 (167)
Q Consensus 9 ~~~~~~~~~~~~~v~~G~~~~l~C~a~~~~~~~~~~i~W~k~~~~~~~~--~~~~-~v--------~~g~y~c~~~~--- 74 (167)
..+.+...+.+..+.+|+++.|.|.+.+. +.|.++....... +... .+ ..|.|+|.+.+
T Consensus 3 ~~P~i~~~~~~~~v~~G~~v~L~C~~~~~-------v~W~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~~~n~~~ 75 (292)
T 4dkd_C 3 SIPVIEPSVPELVVKPGATVTLRCVGNGS-------VEWDGPPSPHWTLYSDGSSSILSTNNATFQNTGTYRCTEPGDPL 75 (292)
T ss_dssp -CCEEESCCSSCEECTTCCEEEEEECSSC-------CCBCCCCCSSCEECCBTTEEEEEESSCCGGGCSCEEECCCC---
T ss_pred CCceecCCCCeEEEcCCCcEEEEEcCCCc-------eEEccCCCCceEEeccCceEEEEEcccccccCEEEEEEEccCCC
Confidence 45667778888999999999999999762 7899764422211 1111 11 27999998643
Q ss_pred -----------------------eEEEeCCcEEEEeeeCCccCCcceeEEEEeCCCeeeEEeeeecCCceEEEccCCeEE
Q psy12724 75 -----------------------EHVLKGNSAVLKCHIPSFVADYVAVESWISDQGEELFVDMTESTDGKYLVLPSGELH 131 (167)
Q Consensus 75 -----------------------~~v~~G~~a~l~C~~~~~~~~p~p~i~W~k~~~~~l~~~~~~~~~~r~~~~~~g~L~ 131 (167)
..+.+|+++.|.|.+.+ ..+.|.++|+++++..+. ...++....++.|.
T Consensus 76 ~~~~~~~l~V~~~~~~~~~~~~~~~v~~g~~v~l~C~~~~--~~~~~~v~W~~~~~~~~~------~~~~~~~~~~~~L~ 147 (292)
T 4dkd_C 76 GGSAAIHLYVKDPARPWNVLAQEVVVFEDQDALLPCLLTD--PVLEAGVSLVRVRGRPLM------RHTNYSFSPWHGFT 147 (292)
T ss_dssp -CCEEECCEECCSSCCEEESCSEEEEETTSCEECCEEESS--GGGGSSEEEEEGGGCCCC------SSCCEECCSSSCCE
T ss_pred CcceEEEEEEcCccccccccCCeEEEcCCCcEEEeeeCCC--CCcceeEEEEecCCCccc------cCCcccccCCceEE
Confidence 34578999999999974 223378999998644442 35677777778899
Q ss_pred EeecCcCCCCcceEEEeeecC----cceEEEeee
Q psy12724 132 IRDVGPEDGYKSYQCRTKHRL----TGETRLSAT 161 (167)
Q Consensus 132 I~~v~~~D~~G~Y~C~a~n~~----~~~~~l~~~ 161 (167)
|.+++.+|+ |.|+|.|.|.. +..+.|.+.
T Consensus 148 i~~~~~~d~-G~Y~C~a~n~~~~~~s~~~~l~V~ 180 (292)
T 4dkd_C 148 IHRAKFIQS-QDYQCSALMGGRKVMSISIRLKVQ 180 (292)
T ss_dssp ETTCCGGGC-SEEEEEECSTTSCEECCCEEEEEE
T ss_pred ECCCCHHHC-eEEEEEEEeCCCceeEEEEEEEEe
Confidence 999999999 99999999865 334555554
No 106
>1nkr_A P58-CL42 KIR; inhibitory receptor, natural killer cells, immunological receptors, immunoglobulin fold; 1.70A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 PDB: 1m4k_A 1efx_D 2dli_A 2dl2_A 3h8n_A
Probab=99.66 E-value=1e-15 Score=114.61 Aligned_cols=123 Identities=12% Similarity=0.096 Sum_probs=82.7
Q ss_pred ceeeEEeEEEEEeCCcEEEEeecCCCCCCcceeeEEeeCCCceeee-------cC-C-c-eE-------EEeeeEEEecC
Q psy12724 12 YYEAQVYDVFVIKGNAAVFKCNLPSFVSDHLDVVSWADTDGGQYQI-------DN-Q-D-FV-------VSQSYTVNIMD 74 (167)
Q Consensus 12 ~~~~~~~~~~v~~G~~~~l~C~a~~~~~~~~~~i~W~k~~~~~~~~-------~~-~-~-~v-------~~g~y~c~~~~ 74 (167)
.+...|. ..|.+|+++.|.|.+.+ + .+.+.|+|++...... .. . . .. .+|.|+|.+.+
T Consensus 10 ~i~~~p~-~~v~~G~~v~L~C~~~~-~---~~~~~w~k~g~~~~~~~~~~~~~~~~~~~~l~I~~v~~~D~G~Y~C~a~~ 84 (201)
T 1nkr_A 10 SLLAHPG-PLVKSEETVILQCWSDV-M---FEHFLLHREGMFNDTLRLIGEHHDGVSKANFSISRMTQDLAGTYRCYGSV 84 (201)
T ss_dssp EEEEESC-SEEETTCCEEEEEEESS-C---CSEEEEEEESSSCEEEEEECEEETTEEEEEEEESSCCGGGCEEEEEEEEB
T ss_pred eEEEEcC-CccCCCCcEEEEEeccC-C---CCEEEEEECCCcCCcceeeeecCCCCceEEEEeccCCcccCeEEEEeEec
Confidence 3555665 77899999999999974 2 2479999986532210 00 0 1 11 26999998621
Q ss_pred --------------------------------eEEEeCCcEEEEeeeCCccCCcceeEEEEeCCCeeeEEeeeecCCceE
Q psy12724 75 --------------------------------EHVLKGNSAVLKCHIPSFVADYVAVESWISDQGEELFVDMTESTDGKY 122 (167)
Q Consensus 75 --------------------------------~~v~~G~~a~l~C~~~~~~~~p~p~i~W~k~~~~~l~~~~~~~~~~r~ 122 (167)
..+.+|++++|.|.+.+ |.+.+.|+||+. .+... ..+.
T Consensus 85 ~~~~~~~~~~s~~~~l~V~~~~~~p~i~~~p~~~v~~G~~v~L~C~~~~----~~~~~~w~k~g~-~~~~~-----~~~~ 154 (201)
T 1nkr_A 85 THSPYQVSAPSDPLDIVIIGLYEKPSLSAQPGPTVLAGENVTLSCSSRS----SYDMYHLSREGE-AHERR-----LPAG 154 (201)
T ss_dssp TTBTTCCCCCCCCEEEEEECSSCCCEEEEESCSEECTTCEEEEEEEESS----CCSEEEEEETTC-SSCEE-----EECE
T ss_pred CCCCccccCCCCCEEEEeeccCCCCceecCCCCccCCCCeEEEEEeCCC----CCceEEEEECCc-ccCcc-----cccc
Confidence 12457999999999973 557889999983 44321 1111
Q ss_pred EEc---cCCeEEEeecCcCCCCcceEEEeeecC
Q psy12724 123 LVL---PSGELHIRDVGPEDGYKSYQCRTKHRL 152 (167)
Q Consensus 123 ~~~---~~g~L~I~~v~~~D~~G~Y~C~a~n~~ 152 (167)
... .++.|.|.+++ |+ |.|+|.|.+..
T Consensus 155 ~~~~~~~~~~L~i~~v~--d~-G~Y~C~a~~~~ 184 (201)
T 1nkr_A 155 PKVNGTFQADFPLGPAT--HG-GTYRCFGSFHD 184 (201)
T ss_dssp EEETTEEEEEEEEEECC--SC-EEEEEEEEETT
T ss_pred cccCCceEEEEEeCCcC--CC-eeEEEEEEcCC
Confidence 111 14689999999 98 99999999753
No 107
>1itb_B Type 1 interleukin-1 receptor; immunoglobulin fold, transmembrane, glycoprotein, signal, complex (immunoglobulin/receptor); 2.50A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 b.1.1.4 PDB: 1ira_Y* 4dep_B* 1g0y_R
Probab=99.66 E-value=2.8e-16 Score=124.19 Aligned_cols=124 Identities=15% Similarity=0.238 Sum_probs=89.6
Q ss_pred EEEEEeCCcEEEEeecCCCCCCcceeeEEeeCCCceee-e-cCCc------eE--------EEeeeEEEecC--------
Q psy12724 19 DVFVIKGNAAVFKCNLPSFVSDHLDVVSWADTDGGQYQ-I-DNQD------FV--------VSQSYTVNIMD-------- 74 (167)
Q Consensus 19 ~~~v~~G~~~~l~C~a~~~~~~~~~~i~W~k~~~~~~~-~-~~~~------~v--------~~g~y~c~~~~-------- 74 (167)
...|.+|+++.|.|.+.+.+.+ +.+.|+|++..... . ...+ .+ ..|.|+|.+.+
T Consensus 14 ~~~v~~G~~v~L~C~~~~~~~~--~~v~W~k~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~a~n~~g~~~~~ 91 (315)
T 1itb_B 14 ILVSSANEIDVRPCPLNPNEHK--GTITWYKDDSKTPVSTEQASRIHQHKEKLWFVPAKVEDSGHYYCVVRNSSYCLRIK 91 (315)
T ss_dssp CCEEETTSCCCCBCCCCSCCCS--SCCCEECTTSCSCSCCCTTSSSEECSSBEECTTCCGGGCSCCEECCCSSSCCCCEE
T ss_pred EEEEcCCCcEEEEeeccCcCCC--ceEEEEeCCCcCccccccCCcEeccCCeEEECCCChhhCEEEEEEEeCCceEEEEE
Confidence 5778999999999999887733 47999999753211 1 1111 11 27999998632
Q ss_pred ---------------------eEEEeCCcEEEEeeeCCc---cCCcceeEEEEeCCCeeeEEeeeecCCceEEEccCCeE
Q psy12724 75 ---------------------EHVLKGNSAVLKCHIPSF---VADYVAVESWISDQGEELFVDMTESTDGKYLVLPSGEL 130 (167)
Q Consensus 75 ---------------------~~v~~G~~a~l~C~~~~~---~~~p~p~i~W~k~~~~~l~~~~~~~~~~r~~~~~~g~L 130 (167)
..+..|+++.|.|.+... .+.|.|.++|+|++ ..+.. ...++ ...++.|
T Consensus 92 ~~v~v~~~~p~~~~~~~~~~~~~~~~g~~v~l~C~~~~~~~~~g~p~~~i~W~k~~-~~l~~-----~~~~~-~~~~~~L 164 (315)
T 1itb_B 92 ISAKFVENEPNLCYNAQAIFKQKLPVAGDGGLVCPYMEFFKNENNELPKLQWYKDC-KPLLL-----DNIHF-SGVKDRL 164 (315)
T ss_dssp CCCEEECCCTTSSSCGGGEEEEEEETTSCEEEECSSCTTTCTTTTCCCCCEEEETT-EECCC-----CSSSE-EEETTEE
T ss_pred EEEEEeCCCCCcccccccccceEEecCCCeEEEEecccccccCCCCCCEEEEEECC-EECCC-----ccceE-eecCceE
Confidence 245679999999998200 15689999999997 55532 23344 3457899
Q ss_pred EEeecCcCCCCcceEEEee-ecC
Q psy12724 131 HIRDVGPEDGYKSYQCRTK-HRL 152 (167)
Q Consensus 131 ~I~~v~~~D~~G~Y~C~a~-n~~ 152 (167)
.|.+++.+|+ |.|+|.|. |..
T Consensus 165 ~i~~v~~~d~-G~Y~C~a~~n~~ 186 (315)
T 1itb_B 165 IVMNVAEKHR-GNYTCHASYTYL 186 (315)
T ss_dssp EESSCCGGGC-EEEEEEEEEEET
T ss_pred EEEeceehhC-cEEEEEEEcCCC
Confidence 9999999999 99999999 665
No 108
>1wio_A CD4, T-cell surface glycoprotein CD4; immunoglobulin fold, transmembrane, MHC lipoprotein, polymorphism; 3.90A {Homo sapiens} SCOP: b.1.1.1 b.1.1.1 b.1.1.3 b.1.1.3 PDB: 1wip_A 1wiq_A 3t0e_E
Probab=99.65 E-value=2.1e-15 Score=122.00 Aligned_cols=113 Identities=18% Similarity=0.263 Sum_probs=86.4
Q ss_pred EEEEEeCCcEEEEeecCCCCCCcceeeEEeeCCCceeee-------------------------cCCceE--------EE
Q psy12724 19 DVFVIKGNAAVFKCNLPSFVSDHLDVVSWADTDGGQYQI-------------------------DNQDFV--------VS 65 (167)
Q Consensus 19 ~~~v~~G~~~~l~C~a~~~~~~~~~~i~W~k~~~~~~~~-------------------------~~~~~v--------~~ 65 (167)
-+.+.+|+++.|.|.+.+.+. +.+.|+|++...+.. ++...+ .+
T Consensus 3 ~v~~~~G~~v~L~C~~~~~p~---~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~L~I~~v~~~D~ 79 (363)
T 1wio_A 3 VVLGKKGDTVELTCTASQKKS---IQFHWKNSNQIKILGNQGSFLTKGPSKLNDRADSRRSLWDQGNFPLIIKNLKIEDS 79 (363)
T ss_dssp EEEEETTSCEEECCCCTTCSS---CCEEEEETTCCEEEEEETTEEEECSSTTGGGEECCHHHHHTTCCCEEECSCCGGGC
T ss_pred eEEEeCCCeEEEEEEecCCCc---eEEEEEeCCccceeccCccEEecCCcccccceeeeeccccCCeEEEEECCCCHHHC
Confidence 467899999999999986664 479999997542311 011111 27
Q ss_pred eeeEEEecCe-----------------EEEeCCcEEEEeeeCCccCCcceeEEEEeCCCeeeEEeeeecCCceEEEccCC
Q psy12724 66 QSYTVNIMDE-----------------HVLKGNSAVLKCHIPSFVADYVAVESWISDQGEELFVDMTESTDGKYLVLPSG 128 (167)
Q Consensus 66 g~y~c~~~~~-----------------~v~~G~~a~l~C~~~~~~~~p~p~i~W~k~~~~~l~~~~~~~~~~r~~~~~~g 128 (167)
|.|+|.+.+. .+.+|+++.|.|.+.+ +|.|.++|+|+++ .+. ..++
T Consensus 80 G~Y~C~~~n~~~~~~l~V~~~~~~~~~~v~~G~~v~l~C~~~~---~p~~~v~W~~~~~-~~~-------------~~~~ 142 (363)
T 1wio_A 80 DTYICEVEDQKEEVQLLVFGLTANSDTHLLQGQSLTLTLESPP---GSSPSVQCRSPRG-KNI-------------QGGK 142 (363)
T ss_dssp EEEEEEETTEEEEEEEEEEEEEESSCSSEESBSCEEEEEECCT---TCCCCEEEECSSS-CEE-------------EESS
T ss_pred EEEEEEEEECCCcEEEEEEeCCCCCceEEecCCCEEEEEEcCC---CCCCeEEEEcCCC-ccc-------------ccce
Confidence 9999998652 3578999999999974 5889999999974 221 2357
Q ss_pred eEEEeecCcCCCCcceEEEeeecC
Q psy12724 129 ELHIRDVGPEDGYKSYQCRTKHRL 152 (167)
Q Consensus 129 ~L~I~~v~~~D~~G~Y~C~a~n~~ 152 (167)
.|.|.+++.+|+ |.|+|.|.|..
T Consensus 143 ~L~i~~v~~~d~-G~Y~C~a~~~~ 165 (363)
T 1wio_A 143 TLSVSQLELQDS-GTWTCTVLQNQ 165 (363)
T ss_dssp EEEECSBCGGGC-EECEEEEEETT
T ss_pred EEEEeeCChhcC-CEEEEEEecCC
Confidence 899999999999 99999999875
No 109
>3sbw_C Programmed cell death 1 ligand 1; PD-1, PD-L1, B7-H1, programmed death-1 ligand 1, complex, costimulatory, immune system; 2.28A {Homo sapiens} PDB: 3fn3_A 3bis_A 3bik_A
Probab=99.65 E-value=1.4e-15 Score=114.32 Aligned_cols=126 Identities=13% Similarity=0.092 Sum_probs=81.4
Q ss_pred EEeEEEEEeCCcEEEEeecCCCCCC--cceeeEEeeCCCceeee--c------------CCc-------------eE---
Q psy12724 16 QVYDVFVIKGNAAVFKCNLPSFVSD--HLDVVSWADTDGGQYQI--D------------NQD-------------FV--- 63 (167)
Q Consensus 16 ~~~~~~v~~G~~~~l~C~a~~~~~~--~~~~i~W~k~~~~~~~~--~------------~~~-------------~v--- 63 (167)
.++.+.+.+|+++.|.|.+.+.+.. ....+.|+|++. .+.. + ..| .+
T Consensus 7 p~~~v~~~~G~~v~L~C~~~~~p~~~~~~~~v~W~~~~~-~v~~~~~g~~~~~~~~~~~~~r~~~~~~~~~~~~~~L~I~ 85 (222)
T 3sbw_C 7 PKDLYVVEYGSNMTIECKFPVEKQLDLAALIVYWEMEDK-NIIQFVHGEEDLKVQHSSYRQRARLLKDQLSLGNAALQIT 85 (222)
T ss_dssp SCSEEEEETTSCEEEEEECCCCSSCCTTTCEEEEEETTE-EEEEEETTEECSSSSCGGGSSSEEECHHHHTTTEEEEEES
T ss_pred CCccEEEEcCCcEEEEeEecCCCCCCCccEEEEEEECCc-EEEEEeCCccccccccccccCceEEccccccCCEEEEEEc
Confidence 4456789999999999998766531 124799999741 1100 0 001 11
Q ss_pred -----EEeeeEEEecC------------------------eEEEeCCcEEEEeeeCCccCCcceeEEEEeCCCeeeEEee
Q psy12724 64 -----VSQSYTVNIMD------------------------EHVLKGNSAVLKCHIPSFVADYVAVESWISDQGEELFVDM 114 (167)
Q Consensus 64 -----~~g~y~c~~~~------------------------~~v~~G~~a~l~C~~~~~~~~p~p~i~W~k~~~~~l~~~~ 114 (167)
.+|.|+|.+.+ ..+.+|+++.|.|.+.+ .|.|.++|+++++..+..
T Consensus 86 ~v~~~D~G~Y~C~~~~~~~~~~~~~l~V~~~~~~~~~~~~~~~~~g~~v~L~C~~~g---~P~p~i~W~~~~g~~~~~-- 160 (222)
T 3sbw_C 86 DVKLQDAGVYRCMISYGGADYKRITVKVNAPYNKINQRILVVDPVTSEHELTCQAEG---YPKAEVIWTSSDHQVLSG-- 160 (222)
T ss_dssp SCCGGGCEEEEEEEESSSEEEEEEEEEEEBCCCCCEEEEEEEETTTTEEEEEEEEEE---BSCCEEEEEETTCCEECC--
T ss_pred CcccccCeEEEEEEEeCCCceeEEEEEEECCCCCCCceeeeeecCCCcEEEEEEecC---CCCCeEEEEECCCceecC--
Confidence 27999998753 12346999999999974 589999999995444421
Q ss_pred eecCCceE--EEccCCeEEEe---ecCcCCCCcceEEEeeecC
Q psy12724 115 TESTDGKY--LVLPSGELHIR---DVGPEDGYKSYQCRTKHRL 152 (167)
Q Consensus 115 ~~~~~~r~--~~~~~g~L~I~---~v~~~D~~G~Y~C~a~n~~ 152 (167)
..+. ....+|.+.+. .+..+|+ |.|+|.|.|..
T Consensus 161 ----~~~~~~~~~~~~~~~~~~~l~v~~~d~-g~Y~C~a~n~~ 198 (222)
T 3sbw_C 161 ----KTTTTNSKREEKLFNVTSTLRINTTTN-EIFYCTFRRLD 198 (222)
T ss_dssp ----EEEEEECC----CEEEEEEEEEECCTT-CEEEEEEEETT
T ss_pred ----ccceEEEcCCCCCEEEEEEEEEeccCC-cEEEEEEEeCc
Confidence 1222 12234444433 5678998 99999999987
No 110
>1moe_A Anti-CEA MAB T84.66; anti carcinoembryonic antigen, diabody, dimer, SCFV, variable domain, immune system; 2.60A {Mus musculus} SCOP: b.1.1.1 b.1.1.1
Probab=99.65 E-value=1.2e-15 Score=116.53 Aligned_cols=136 Identities=18% Similarity=0.266 Sum_probs=88.3
Q ss_pred eeeEEeEEEEEeCCcEEEEeecCCCCC-CcceeeEEeeCC-Cc--e-eeec--------CCc----------eE------
Q psy12724 13 YEAQVYDVFVIKGNAAVFKCNLPSFVS-DHLDVVSWADTD-GG--Q-YQID--------NQD----------FV------ 63 (167)
Q Consensus 13 ~~~~~~~~~v~~G~~~~l~C~a~~~~~-~~~~~i~W~k~~-~~--~-~~~~--------~~~----------~v------ 63 (167)
+...|.+..+.+|+++.|.|.+.+.+. ...+.+.|+|++ +. . +... ..| .+
T Consensus 4 v~~~p~~~~v~~G~~v~L~C~~~~~~~~~~~~~i~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~ 83 (240)
T 1moe_A 4 LTQSPASLAVSLGQRATMSCRAGESVDIFGVGFLHWYQQKPGQPPKLLIYRASNLESGIPVRFSGTGSRTDFTLIIDPVE 83 (240)
T ss_dssp EEEECSEEEECTTSCEEEEEEESSCCEETTEECEEEEEECTTSCCEEEEETTTEECTTCCTTEEEEEETTEEEEEESSCC
T ss_pred eEeeCCeEEecCCCCEEEEEeCCCccccCCCceEEEEEECCCCCceEEEEEecccCcCCCccEEEEecCCeEEEEEcCCC
Confidence 556788899999999999999988761 002579999863 11 1 1100 011 11
Q ss_pred --EEeeeEEEecC--------------------------------eEEEeCCcEEEEeeeCCccCCcceeEEEEeCC-Ce
Q psy12724 64 --VSQSYTVNIMD--------------------------------EHVLKGNSAVLKCHIPSFVADYVAVESWISDQ-GE 108 (167)
Q Consensus 64 --~~g~y~c~~~~--------------------------------~~v~~G~~a~l~C~~~~~~~~p~p~i~W~k~~-~~ 108 (167)
.+|.|.|.+.+ ..+.+|+++.|.|.+.+. ..|.+.++|+|++ +.
T Consensus 84 ~~D~G~Y~C~~~n~~~~~~~~~~~l~V~~~~~~~~~~~~~~~~~~~~v~~G~~v~L~C~~~g~-p~~~~~v~W~k~~~g~ 162 (240)
T 1moe_A 84 ADDVATYYCQQTNEDPYTFGGGTKLEIKGGGSGGGGEVQLQQSGAELVEPGASVKLSCTASGF-NIKDTYMHWVKQRPEQ 162 (240)
T ss_dssp GGGCEEEEEEECSSSSCCBCCCEEEEECCCSCCCCCCCEEEECCCEEECTTCCEEEEEEEESS-CGGGSCEEEEEECTTS
T ss_pred hhhCEEEEEEEccCCceeecCCEEEEEecCCCCCCceEEEeCCCceEEeCCCcEEEEEEEcCc-cCCCCEEEEEEECCCC
Confidence 27999998632 134569999999999753 1124689999962 11
Q ss_pred ee--EEee---------eecCCceEEEccC-----CeEEEeecCcCCCCcceEEEeee
Q psy12724 109 EL--FVDM---------TESTDGKYLVLPS-----GELHIRDVGPEDGYKSYQCRTKH 150 (167)
Q Consensus 109 ~l--~~~~---------~~~~~~r~~~~~~-----g~L~I~~v~~~D~~G~Y~C~a~n 150 (167)
.+ .... .+...+|+.+..+ ..|.|.+++.+|+ |.|.|.|.+
T Consensus 163 ~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~I~~v~~~D~-G~Y~C~a~~ 219 (240)
T 1moe_A 163 GLEWIGRIDPANGNSKYVPKFQGKATITADTSSNTAYLQLTSLTSEDT-AVYYCAPFG 219 (240)
T ss_dssp CCEEEEEEETTTTEEEECGGGTTTEEEEEETTTTEEEEEECSCCGGGC-EEEEEEECS
T ss_pred CcEEEEEEcccCCccccCccccccEEEEEcccCCEEEEEECcCCHHHC-EEEEEEEEe
Confidence 11 0000 0012356766533 3799999999999 999999984
No 111
>3knb_A Titin; IG-like, titin, OBSL1, ATP-binding, calmodulin-BIN cardiomyopathy, disease mutation, immunoglobulin domain; 1.40A {Homo sapiens} PDB: 3q5o_A 2wp3_T* 2wwk_T 2wwm_D 2y9r_T*
Probab=99.65 E-value=3.5e-16 Score=106.16 Aligned_cols=83 Identities=14% Similarity=0.293 Sum_probs=64.1
Q ss_pred EEEecCeEEEeCCcEEEEeeeCCccCCcceeEEEEeCCCeeeEEeeeecCCceEEEccCC---eEEEeecCcCCCCcceE
Q psy12724 69 TVNIMDEHVLKGNSAVLKCHIPSFVADYVAVESWISDQGEELFVDMTESTDGKYLVLPSG---ELHIRDVGPEDGYKSYQ 145 (167)
Q Consensus 69 ~c~~~~~~v~~G~~a~l~C~~~~~~~~p~p~i~W~k~~~~~l~~~~~~~~~~r~~~~~~g---~L~I~~v~~~D~~G~Y~ 145 (167)
.-.+.+..+.+|+++.|.|.+. |.|.|.++|+||+ ..+.. ....|+.+..++ .|.|.+++.+|+ |.|+
T Consensus 9 ~~~p~~~~v~~G~~~~l~C~~~---g~P~p~v~W~k~g-~~i~~----~~~~~~~~~~~~~~~~L~I~~~~~~D~-G~Y~ 79 (100)
T 3knb_A 9 EALPSDISIDEGKVLTVACAFT---GEPTPEVTWSCGG-RKIHS----QEQGRFHIENTDDLTTLIIMDVQKQDG-GLYT 79 (100)
T ss_dssp CCCCSEEEEETTSEEEEEEEEE---EESCCEEEEEETT-EECCT----TGGGTEEEEECSSEEEEEESSCCGGGC-EEEE
T ss_pred EeCCCcEEEeCCCeEEEEEEEE---EecCCEEEEEECc-eEeee----eccceeeeecccceEEEEEcCCCccCC-EEEE
Confidence 3345667889999999999998 4599999999997 56532 134577766544 699999999999 9999
Q ss_pred EEeeecC---cceEEEee
Q psy12724 146 CRTKHRL---TGETRLSA 160 (167)
Q Consensus 146 C~a~n~~---~~~~~l~~ 160 (167)
|.|+|.. +..+.|.+
T Consensus 80 C~a~N~~G~~~~~~~l~V 97 (100)
T 3knb_A 80 LSLGNEFGSDSATVNIHI 97 (100)
T ss_dssp EEEEETTEEEEEEEEEEE
T ss_pred EEEEECCCEEEEEEEEEE
Confidence 9999987 33445554
No 112
>4i0k_A CD276 antigen; immunoglobulin domain, glycoprotein, immunity, adaptive IMMU structural genomics, protein structure initiative; HET: NAG BMA MAN; 2.97A {Mus musculus}
Probab=99.65 E-value=6.6e-16 Score=116.25 Aligned_cols=136 Identities=17% Similarity=0.192 Sum_probs=88.0
Q ss_pred EEEEEeCCcEEEEeecCCCCC--CcceeeEEeeCCCceee----------ec-C-------------CceE--------E
Q psy12724 19 DVFVIKGNAAVFKCNLPSFVS--DHLDVVSWADTDGGQYQ----------ID-N-------------QDFV--------V 64 (167)
Q Consensus 19 ~~~v~~G~~~~l~C~a~~~~~--~~~~~i~W~k~~~~~~~----------~~-~-------------~~~v--------~ 64 (167)
.+.+.+|+++.|.|.+.+.+. ...+.+.|.+++..... +. . ...+ .
T Consensus 4 ~v~~~~G~~v~L~C~~~~~~~~~~~~~~v~W~~~~~~~~i~~~~~~~~~~~~~~~r~~~~~~~~~~~~~sL~I~~v~~~D 83 (222)
T 4i0k_A 4 PVVALVDTDATLRCSFSPEPGFSLAQLNLIWQLTDTKQLVHSFTEGRDQGSAYSNRTALFPDLLVQGNASLRLQRVRVTD 83 (222)
T ss_dssp CCCCCTTSCEEECCBCCCCTTCCTTTEEEEEEETTTCCEEEEEETTEEEEESSCSCEECCTTTGGGTBCCEEECSCCGGG
T ss_pred CEEEECCCCeEEEEEecCCCCCCCCceEEEEEECCCccEEEEEcCCcccccceeCcEEEecccccCCeEEEEECCccccc
Confidence 356889999999999987652 12357999998643210 00 0 1111 2
Q ss_pred EeeeEEEecC--------------------------eEEEeCCcEEEEeeeCCccCCcceeEEEEeCCCeeeEEeeeecC
Q psy12724 65 SQSYTVNIMD--------------------------EHVLKGNSAVLKCHIPSFVADYVAVESWISDQGEELFVDMTEST 118 (167)
Q Consensus 65 ~g~y~c~~~~--------------------------~~v~~G~~a~l~C~~~~~~~~p~p~i~W~k~~~~~l~~~~~~~~ 118 (167)
+|.|+|.+.+ ..+.+|+++.|.|.+.. +.|.|.++|+++++..+... .
T Consensus 84 ~G~Y~C~~~~~~~~~~~~~l~V~~~~~~p~i~~~~~~~v~~G~~~~l~C~~~~--g~P~~~v~W~~~~~~~~~~~----~ 157 (222)
T 4i0k_A 84 EGSYTCFVSIQDFDSAAVSLQVAAPYSKPSMTLEPNKDLRPGNMVTITCSSYQ--GYPEAEVFWKDGQGVPLTGN----V 157 (222)
T ss_dssp CSCEEEEEEECCCCCCCCCCCCCBCCCCCEEECCC-----CCSEEEEEEEEEE--EBSCCEEEEECTTSCBCCSE----E
T ss_pred CEEEEEEEEeCCCceEEEEEEEEcCCCCCcEEeCCCceecCCceEEEEEeccc--ccCCCeEEEEcCCCccCCCC----c
Confidence 7999998742 23457999999999932 45889999999654444211 0
Q ss_pred CceEEEccCCe---EEEeecCcCCCCcceEEEeeecC---cceEEEeee
Q psy12724 119 DGKYLVLPSGE---LHIRDVGPEDGYKSYQCRTKHRL---TGETRLSAT 161 (167)
Q Consensus 119 ~~r~~~~~~g~---L~I~~v~~~D~~G~Y~C~a~n~~---~~~~~l~~~ 161 (167)
........+|. |.|.+++.+|+ |.|+|.|.|.. ...+.|.+.
T Consensus 158 ~~~~~~~~~~~~~~l~i~~v~~~d~-G~Y~C~a~n~~g~~~~~~~l~V~ 205 (222)
T 4i0k_A 158 TTSQMANERGLFDVHSVLRVVLGAN-GTYSCLVRNPVLQQDAHGSVTIT 205 (222)
T ss_dssp EEEEEECTTSCEEEEEEEEEECCTT-CEEEEEEEETTTTEEEEEEEECC
T ss_pred ceeEEcCCCCeEEEEEEEEEEeCCC-CEEEEEEECCCCCCceEEEEEEe
Confidence 11122233454 89999999998 99999999987 334455543
No 113
>3vh8_G Killer cell immunoglobulin-like receptor 3DL1; immunoglobulin fold, natural killer cell receptor, immune SY; HET: NAG; 1.80A {Homo sapiens} PDB: 1im9_D
Probab=99.64 E-value=1.2e-15 Score=121.16 Aligned_cols=129 Identities=12% Similarity=0.092 Sum_probs=87.8
Q ss_pred eeceeeEEeEEEEEeCCcEEEEeecCCCCCCcceeeEEeeCCCceeee------cCCceE------EEeeeEEEecC---
Q psy12724 10 SQYYEAQVYDVFVIKGNAAVFKCNLPSFVSDHLDVVSWADTDGGQYQI------DNQDFV------VSQSYTVNIMD--- 74 (167)
Q Consensus 10 ~~~~~~~~~~~~v~~G~~~~l~C~a~~~~~~~~~~i~W~k~~~~~~~~------~~~~~v------~~g~y~c~~~~--- 74 (167)
.+.+...|. ..|.+|+++.|.|.+.+.+ +.+.|+|++...... ++...+ .+|.|+|.+.+
T Consensus 24 ~P~i~~~p~-~~v~~G~~v~L~C~~~~~~----~~~~W~k~g~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~~~~~ 98 (316)
T 3vh8_G 24 KPFLSAWPS-AVVPRGGHVTLRCHYRHRF----NNFMLYKEDRIHIPIFHGRIFQESFNMSPVTTAHAGNYTCRGSHPHS 98 (316)
T ss_dssp CCEEEEESC-SEEETTSCEEEEEEBTTBC----CSEEEEESSCSSSCHHHHCCBSSCEEECSCCGGGCEEEEEEEBCSSS
T ss_pred CCEeeccCC-CccCCCCCEEEEEEccCCC----ceEEEEeCCCccceeecCCcceEEEEECCCCcccCeEEEEEEEcCCC
Confidence 344667776 6788999999999998873 369999997643211 111111 27999997531
Q ss_pred -----------------------------eEEEeCCcEEEEeeeCCccCCcceeEEEEeCCCeeeEEeeeecCCceEEE-
Q psy12724 75 -----------------------------EHVLKGNSAVLKCHIPSFVADYVAVESWISDQGEELFVDMTESTDGKYLV- 124 (167)
Q Consensus 75 -----------------------------~~v~~G~~a~l~C~~~~~~~~p~p~i~W~k~~~~~l~~~~~~~~~~r~~~- 124 (167)
..+.+|++++|.|.+.+ +.+.+.|+|++. .+.+.. ...+...
T Consensus 99 ~~~~~~~s~~~~l~V~~~~~~p~~~~~~~~~v~~G~~v~L~C~~~~----~~~~~~w~k~g~-~~~~~~---~~~~~~~~ 170 (316)
T 3vh8_G 99 PTGWSAPSNPVVIMVTGNHRKPSLLAHPGPLVKSGERVILQCWSDI----MFEHFFLHKEGI-SKDPSR---LVGQIHDG 170 (316)
T ss_dssp SSSBCCCCCCEEEEEECSSCCCEEEEESCSEEETTCCEEEEEEESS----CCSEEEEEETTC-CSCCEE---EECEEETT
T ss_pred CcceecCCCcEEEEEecCCCCCeEEecCCCccCCCCeEEEEEcCCC----CCcEEEEEECCC-ccccce---eeeeecCC
Confidence 12567999999999953 455779999974 432110 0111110
Q ss_pred ccCCeEEEeecCcCCCCcceEEEeeecC
Q psy12724 125 LPSGELHIRDVGPEDGYKSYQCRTKHRL 152 (167)
Q Consensus 125 ~~~g~L~I~~v~~~D~~G~Y~C~a~n~~ 152 (167)
..++.|.|.+++.+|+ |.|+|.|.|..
T Consensus 171 ~~~~~L~i~~v~~~D~-G~Y~C~a~n~~ 197 (316)
T 3vh8_G 171 VSKANFSIGPMMLALA-GTYRCYGSVTH 197 (316)
T ss_dssp EEEEEEEECSCCGGGC-EEEEEEEECTT
T ss_pred CceEEEEECCCChhhC-ceEEEEEecCC
Confidence 1346899999999999 99999999875
No 114
>3tf7_C 42F3 MUT7 SCFV (42F3 alpha chain, linker, 42F3 BE; IG and MHC, antigen recognition, TCR-PMHC, membrane receptor system; 2.75A {Mus musculus}
Probab=99.64 E-value=1.4e-15 Score=117.99 Aligned_cols=145 Identities=14% Similarity=0.200 Sum_probs=94.1
Q ss_pred eceeeEEeEEEEEeCCcEEEEeecCCCCCCcceeeEEeeCC-Cce---ee-e--------cCCc------------eE--
Q psy12724 11 QYYEAQVYDVFVIKGNAAVFKCNLPSFVSDHLDVVSWADTD-GGQ---YQ-I--------DNQD------------FV-- 63 (167)
Q Consensus 11 ~~~~~~~~~~~v~~G~~~~l~C~a~~~~~~~~~~i~W~k~~-~~~---~~-~--------~~~~------------~v-- 63 (167)
+.+...+.++.+.+|+++.|.|.+.+.+. +.+.|+|.+ +.. +. . ...| .+
T Consensus 4 ~~v~q~p~~~~v~~G~~v~L~C~~~~~~~---~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~sL~I 80 (256)
T 3tf7_C 4 QSVTQPDARVTVSEGASLQLRCKYSYSAT---PYLFWYVQYPRQGPQMLLKYYSGDPVVQGVNGFEAEFSKSDSSFHLRK 80 (256)
T ss_dssp CEEECSCSEEEEETTSCEEECCEEECSSC---CEEEEEEECTTSCCEEEEEECSSCSEEECSTTCEEEEETTTTEEEEEE
T ss_pred cEEEecCceEEecCCCeEEEEEEeCCCCC---ceEEEEEECCCCCeEEEEEEccCCcccccCCCeEEEEcCCCCEEEEEE
Confidence 34666788999999999999999988754 479998842 110 10 0 0001 11
Q ss_pred ------EEeeeEEEecC-------------------------------------------------eEEEeCCcEEEEee
Q psy12724 64 ------VSQSYTVNIMD-------------------------------------------------EHVLKGNSAVLKCH 88 (167)
Q Consensus 64 ------~~g~y~c~~~~-------------------------------------------------~~v~~G~~a~l~C~ 88 (167)
.+|.|.|.+.+ ..+.+|++++|.|.
T Consensus 81 ~~v~~~DsG~Y~C~~~~~~~~~~~~~~~~~~l~V~~~~~~~~~~~~~~~~~~~~~~~~~v~~~p~~~~v~~G~~v~L~C~ 160 (256)
T 3tf7_C 81 ASVHRSDSAVYFCAVSAKGTGSKLSFGKGAKLTVSPGGGGSGGGGSGGGGSGGGGSEAAVTQSPRNKVTVTGENVTLSCR 160 (256)
T ss_dssp SSCCGGGCSEEEEEEECTTCTTCEEECCCEEEEEEC---------------------CCEEESCSEEEEETTCCEEECEE
T ss_pred CCCCcccCEEEEEEEecCCCccceEECCCeEEEEeCCCCCcCCCCcCcccCCCCcCccEEEecCCEEEEeCCCcEEEEEE
Confidence 27999998632 12347999999999
Q ss_pred eCCccCCcceeEEEEeCC-Ceee--EEeee-------ecCCceEEEcc----CCeEEEeecCcCCCCcceEEEeeecC--
Q psy12724 89 IPSFVADYVAVESWISDQ-GEEL--FVDMT-------ESTDGKYLVLP----SGELHIRDVGPEDGYKSYQCRTKHRL-- 152 (167)
Q Consensus 89 ~~~~~~~p~p~i~W~k~~-~~~l--~~~~~-------~~~~~r~~~~~----~g~L~I~~v~~~D~~G~Y~C~a~n~~-- 152 (167)
+.+ . .|.+.|+|+. +... ..... ....+||.+.. ++.|.|.+++.+|+ |.|.|.|.|..
T Consensus 161 ~~~---~-~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~L~I~~v~~~Ds-G~Y~C~a~n~~g~ 235 (256)
T 3tf7_C 161 QTN---S-HNYMYWYRQDTGHELRLIYYSYGAGNLQIGDVPDGYKATRTTQEDFFLTLESASPSQT-SLYFCASSDAPGQ 235 (256)
T ss_dssp ECS---C-CSEEEEEEECTTSCEEEEEEEESTTCCEECSCCTTCEEECCSSSBCEEEESSCCGGGC-EEEEEEEEEETTE
T ss_pred cCC---C-ceEEEEEEECCCCCeEEEEEEcCCCceecCccCCceEEEeCCCCeEEEEECCCCHHHC-EEEEEEecCCCCc
Confidence 974 2 5679999842 1111 11000 00124555442 23799999999999 99999999974
Q ss_pred ---cceEEEeeeCC
Q psy12724 153 ---TGETRLSATKG 163 (167)
Q Consensus 153 ---~~~~~l~~~~~ 163 (167)
..-++|.+++.
T Consensus 236 ~~fG~gt~l~v~~~ 249 (256)
T 3tf7_C 236 LYFGEGSKLTVLEL 249 (256)
T ss_dssp EEECCCEEEEEECG
T ss_pred cEECCCeEEEEEcc
Confidence 45566666543
No 115
>3mjg_X Beta-type platelet-derived growth factor receptor; protein-protein complex, growth factor-receptor complex, TRA hormone complex; HET: NDG NAG; 2.30A {Homo sapiens}
Probab=99.64 E-value=2.4e-15 Score=117.42 Aligned_cols=128 Identities=19% Similarity=0.235 Sum_probs=86.1
Q ss_pred EEEEeCCcEEEEeecCCCCCCcceeeEEeeCC-Cceeee--cCCceE----EEeeeEEEecC------------------
Q psy12724 20 VFVIKGNAAVFKCNLPSFVSDHLDVVSWADTD-GGQYQI--DNQDFV----VSQSYTVNIMD------------------ 74 (167)
Q Consensus 20 ~~v~~G~~~~l~C~a~~~~~~~~~~i~W~k~~-~~~~~~--~~~~~v----~~g~y~c~~~~------------------ 74 (167)
..+.+|+++.|.|.+. .|. |.++|.+.+ +..+.. +..... ..|.|+|.+.+
T Consensus 105 ~~v~~G~~v~l~C~~~-~p~---~~v~w~~~~~~~~~~~~~~~~~~~~~~~d~G~Y~C~a~n~~~~~~s~~~~l~v~~~~ 180 (289)
T 3mjg_X 105 IFLTEITEITIPCRVT-DPQ---LVVTLHEKKGDVALPVPYDHQRGFSGIFEDRSYICKTTIGDREVDSDAYYVYRLQVS 180 (289)
T ss_dssp EEESSCCCEEECCCBS-CTT---SCEEEEESSCCSCCCCCEETTTEEEECCCSSEEEEEEEETTEEEECCCEEEEECCCC
T ss_pred EEeecCCeEEEEeEcC-CCC---ceEEEEeCCCCCccceeecCCcCeeeeccCcEEEEEEEeCCceeeeeeEEEEecCCC
Confidence 6789999999999998 443 358888875 333321 111111 36899997631
Q ss_pred ----------eEEEeCCcEEEEeeeCCccCCcceeEEEEeCCCeeeEEeeeecCCceEEEc------cCCeEEEeecCcC
Q psy12724 75 ----------EHVLKGNSAVLKCHIPSFVADYVAVESWISDQGEELFVDMTESTDGKYLVL------PSGELHIRDVGPE 138 (167)
Q Consensus 75 ----------~~v~~G~~a~l~C~~~~~~~~p~p~i~W~k~~~~~l~~~~~~~~~~r~~~~------~~g~L~I~~v~~~ 138 (167)
..+.+|+++.|.|.+.+ +|.|.++|++++. ..... ........ ..+.|.|.+++.+
T Consensus 181 ~p~i~~~~~~~~v~~G~~v~L~C~~~g---~p~p~v~W~~~~~-~~~~~----~~~~~~~~~~~~~~~~~~L~I~~v~~~ 252 (289)
T 3mjg_X 181 SINVSVNAVQTVVRQGENITLMCIVIG---NEVVNFEWTYPRK-ESGRL----VEPVTDFLLDMPYHIRSILHIPSAELE 252 (289)
T ss_dssp CCCCEEEESCSEEETTSCEEEEEEEES---CSSBEEEEECTTS-SSSCC----CCCEEEESCTTTTEEEEEEEESSCCSS
T ss_pred CCCcEEeCCcceeEcCCCEEEEEEECC---CCCcceEEEcCCc-cCCCc----ccccccccCCcceEEEEEEEEcccChh
Confidence 24578999999999974 5999999998753 21100 01111111 2358999999999
Q ss_pred CCCcceEEEeeecC---cceEEEee
Q psy12724 139 DGYKSYQCRTKHRL---TGETRLSA 160 (167)
Q Consensus 139 D~~G~Y~C~a~n~~---~~~~~l~~ 160 (167)
|+ |.|+|.|.|.. ...+.|.+
T Consensus 253 D~-G~Y~C~a~N~~G~~~~~~~l~v 276 (289)
T 3mjg_X 253 DS-GTYTCNVTESVNDHQDEKAINI 276 (289)
T ss_dssp CC-EEEEEEEEETTTTEEEEEEEEE
T ss_pred hC-cEEEEEeecCCCCceeEEEEEE
Confidence 98 99999999988 33444444
No 116
>3ejj_X Macrophage colony-stimulating factor 1 receptor; growth factor-receptor complex, receptor tyrosine kinase, CY 4-helix bundle, ATP-binding; HET: NAG; 2.40A {Mus musculus} PDB: 4exp_X*
Probab=99.64 E-value=3.7e-15 Score=115.97 Aligned_cols=132 Identities=19% Similarity=0.347 Sum_probs=94.2
Q ss_pred eeeEEeEEEEEeCCcEEEEeecCCCCCCcceeeEEeeCCCceeee--cCC-ceE--------EEeeeEEEecC-------
Q psy12724 13 YEAQVYDVFVIKGNAAVFKCNLPSFVSDHLDVVSWADTDGGQYQI--DNQ-DFV--------VSQSYTVNIMD------- 74 (167)
Q Consensus 13 ~~~~~~~~~v~~G~~~~l~C~a~~~~~~~~~~i~W~k~~~~~~~~--~~~-~~v--------~~g~y~c~~~~------- 74 (167)
+...+.+..+.+|+++.|.|.+.+ . +.|.+++...... ... ..+ ..|.|+|.+.+
T Consensus 7 i~~~~~~~~v~~G~~v~L~C~~~~---~----v~W~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~~~~~~~~~~~ 79 (289)
T 3ejj_X 7 IEPSGPELVVEPGETVTLRCVSNG---S----VEWDGPISPYWTLDPESPGSTLTTRNATFKNTGTYRCTELEDPMAGST 79 (289)
T ss_dssp EESCSSEEEECTTCCEEEEEECSS---C----CEEECSCSSSSEECCCSSCCEEEESSCCGGGCEEEEEECCC-----CE
T ss_pred ecCCCceEEECCCCCEEEEEEeCC---c----EEEccCCCceEEEeccCCccEEEEeeeccccCEEEEEEEeccCCccee
Confidence 445667888999999999999976 2 8999875432211 111 111 27999998632
Q ss_pred -------------------eEEEeCCcEEEEeeeCCccCCccee-EEEEeCCCeeeEEeeeecCCceEEEccCCeEEEee
Q psy12724 75 -------------------EHVLKGNSAVLKCHIPSFVADYVAV-ESWISDQGEELFVDMTESTDGKYLVLPSGELHIRD 134 (167)
Q Consensus 75 -------------------~~v~~G~~a~l~C~~~~~~~~p~p~-i~W~k~~~~~l~~~~~~~~~~r~~~~~~g~L~I~~ 134 (167)
..+.+|+++.|.|.+.+ .|.+. ++|+++++..+. ...++.+..++.|.|.+
T Consensus 80 ~~~l~V~~~~~~~~~~~~~~~v~~g~~v~L~C~~~~---~~~~~~v~W~~~~~~~~~------~~~~~~~~~~~~L~i~~ 150 (289)
T 3ejj_X 80 TIHLYVKDPAHSWNLLAQEVTVVEGQEAVLPCLITD---PALKDSVSLMREGGRQVL------RKTVYFFSPWRGFIIRK 150 (289)
T ss_dssp EEEEEECCSSCSEEESCSEEEEETTSCEEECEEESC---GGGGGSEEEEEGGGEECC------TTCCEEEETTTEEEESS
T ss_pred EEEEEEeCCCcceecccceEEEecCCceEeEEEccC---CCcceEEEEEecCCeecC------CCccEEECCCCCEEEee
Confidence 34567999999999985 35554 899876544442 46678888889999999
Q ss_pred cCcCCCCcceEEEeeecC----cceEEEeee
Q psy12724 135 VGPEDGYKSYQCRTKHRL----TGETRLSAT 161 (167)
Q Consensus 135 v~~~D~~G~Y~C~a~n~~----~~~~~l~~~ 161 (167)
++.+|+ |.|+|.|.|.. +..+.|.+.
T Consensus 151 v~~~d~-G~Y~C~a~~~~~~~~~~~~~l~V~ 180 (289)
T 3ejj_X 151 AKVLDS-NTYVCKTMVNGRESTSTGIWLKVN 180 (289)
T ss_dssp CCGGGC-EEEEEEEEETTEEEECCCEEEEEE
T ss_pred cccccC-EEEEEEEEeCCCccccccEEEEEE
Confidence 999999 99999999533 344455543
No 117
>1ry7_B FGFR-3, fibroblast growth factor receptor 3; FGF-FGFR complex, beta trefoil, IG domain, growth factor/growth factor receptor complex; 3.20A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4
Probab=99.64 E-value=1.2e-16 Score=127.27 Aligned_cols=129 Identities=16% Similarity=0.219 Sum_probs=50.9
Q ss_pred eeeEEeEEEEEeCCcEEEEeecCCCCCCcceeeEEeeCCCceeeecC-------Cce------EEEeeeEEEecC-----
Q psy12724 13 YEAQVYDVFVIKGNAAVFKCNLPSFVSDHLDVVSWADTDGGQYQIDN-------QDF------VVSQSYTVNIMD----- 74 (167)
Q Consensus 13 ~~~~~~~~~v~~G~~~~l~C~a~~~~~~~~~~i~W~k~~~~~~~~~~-------~~~------v~~g~y~c~~~~----- 74 (167)
+...+++..+.+|+++.|.|.+.+.+. .+.+.|+|++. .+..+. ... -..|.|+|.+.+
T Consensus 11 ~~~~~~~~~v~~G~~v~l~C~~~~~~p--~~~v~W~k~g~-~~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~a~n~~~~~ 87 (334)
T 1ry7_B 11 EPGQQEQLVFGSGDAVELSCPPPGGGP--MGPTVWVKDGT-GLVPSERVLVGPQRLQVLNASHEDSGAYSCRQRLTQRVL 87 (334)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred CCCCcCcEEEecCCcEEEEeeCCCCCC--CcceEEEECCe-eCCCcccEEeccceEEEeecccccCEEEEEEEEeCCeEE
Confidence 344588899999999999999987642 24799999864 333211 111 137999998643
Q ss_pred ---------------------------------------------eEEEeCCcEEEEeeeCCccCCcceeEEEEeCCCee
Q psy12724 75 ---------------------------------------------EHVLKGNSAVLKCHIPSFVADYVAVESWISDQGEE 109 (167)
Q Consensus 75 ---------------------------------------------~~v~~G~~a~l~C~~~~~~~~p~p~i~W~k~~~~~ 109 (167)
..+.+|+++.|.|.+.+ .|.|.++|+|++ ..
T Consensus 88 ~~~~l~V~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~p~~~~~~~~~v~~g~~v~l~C~~~g---~p~~~v~W~~~~-~~ 163 (334)
T 1ry7_B 88 CHFSVRVTDAPSSGDDEDGEDEAEDTGVDTGAPYWTRPERMDKKLLAVPAANTVRFRCPAAG---NPTPSISWLKNG-RE 163 (334)
T ss_dssp -------------------------------CCCCSCCTTCCCCEEEEETTCCEEEECCCCC---SSCCEEECCBTT-BC
T ss_pred EEEEEEEeccCccccccccccccccccccCCCCEEeccccccceeEEecCCCcEEEEEEccC---CCCCeEEEEECC-EE
Confidence 23457999999999974 588999999997 45
Q ss_pred eEEeeeecCCceEE-EccCCeEEEeecCcCCCCcceEEEeeecC
Q psy12724 110 LFVDMTESTDGKYL-VLPSGELHIRDVGPEDGYKSYQCRTKHRL 152 (167)
Q Consensus 110 l~~~~~~~~~~r~~-~~~~g~L~I~~v~~~D~~G~Y~C~a~n~~ 152 (167)
+.... ....+. ...++.|.|.+++.+|+ |.|+|.|.|..
T Consensus 164 ~~~~~---~~~~~~~~~~~~~L~i~~v~~~d~-G~Y~C~a~n~~ 203 (334)
T 1ry7_B 164 FRGEH---RIGGIKLRHQQWSLVMESVVPSDR-GNYTCVVENKF 203 (334)
T ss_dssp CCTTS---STTCCCCCTTTTEEEECSCCGGGC-CCEEEEEEETT
T ss_pred Ccccc---cccceecccceEEEEECCCCcccC-EEEEEEEEeCC
Confidence 43110 001111 12356899999999999 99999999986
No 118
>3juy_B 3B3 single chain variant HIV-1 antibody; envelope protein GP120, broadly neutralizing antibody, 3B3 single chain variable fragment, immune system; 2.50A {Homo sapiens}
Probab=99.64 E-value=3e-15 Score=115.84 Aligned_cols=137 Identities=18% Similarity=0.274 Sum_probs=90.3
Q ss_pred eceeeEEeEEEEEeCCcEEEEeecCCCCCCcceeeEEeeCC-Cce---e----------------------eecCCc---
Q psy12724 11 QYYEAQVYDVFVIKGNAAVFKCNLPSFVSDHLDVVSWADTD-GGQ---Y----------------------QIDNQD--- 61 (167)
Q Consensus 11 ~~~~~~~~~~~v~~G~~~~l~C~a~~~~~~~~~~i~W~k~~-~~~---~----------------------~~~~~~--- 61 (167)
++|...+.++.|.+|+++.|.|.+.+...+ .+.+.|+|.+ +.. + ..+...
T Consensus 7 ~~~~~~~~~~~v~~G~~v~L~C~~~~~~~~-~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~ 85 (256)
T 3juy_B 7 QVQLVQSGAEVKKPGASVKVSCQASGYRFS-HFTVHWVRQAPGQRFEWMGWINPYNGNKEFSAKFQDRVTFTADTSANTA 85 (256)
T ss_dssp CCEEEECCCEEECTTCCEEEEEEEESSCGG-GSCEEEEEECTTSCCEEEEEEETTTTEEEECTTTTTTEEEEEETTTTEE
T ss_pred eEEEEecCCceecCCCeEEEEEEeeccccc-CceEEEEEECCCCCcEEEEEEEcCCCcEeecccCcceEEEEEecCCCEE
Confidence 457788999999999999999999874221 2479999742 111 0 000100
Q ss_pred eE--------EEeeeEEEecCe----------------------------------------------------EEEeCC
Q psy12724 62 FV--------VSQSYTVNIMDE----------------------------------------------------HVLKGN 81 (167)
Q Consensus 62 ~v--------~~g~y~c~~~~~----------------------------------------------------~v~~G~ 81 (167)
.+ .+|.|.|.+.+. .+.+|+
T Consensus 86 ~L~I~~v~~~DsG~Y~C~~~~~~~~~~~~~~~~~~~~~~~~~~l~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~G~ 165 (256)
T 3juy_B 86 YMELRSLRSADTAVYYCARVGEWGWDDSPYDNYYMDVWGKGTTVIVSSGGGGSGGGGSGGGGSEIVLTQAPGTLSLSPGE 165 (256)
T ss_dssp EEEECSCCGGGCEEEEEEECCCCCTTCCTTTTCSCCEECCCEEEEECSCC----------CCCCCCEEEECSEEEECTTS
T ss_pred EEEECCCCcccCEEEEEeEEeccccccccccccceeEECCceEEeecCCcccccccccCCCcceeEEEecCCeEEEeCCC
Confidence 01 279999987542 245799
Q ss_pred cEEEEeeeCCccCCcc-eeEEEEeC--CCee-eEEee----eecCCceEEEccCC---eEEEeecCcCCCCcceEEEeee
Q psy12724 82 SAVLKCHIPSFVADYV-AVESWISD--QGEE-LFVDM----TESTDGKYLVLPSG---ELHIRDVGPEDGYKSYQCRTKH 150 (167)
Q Consensus 82 ~a~l~C~~~~~~~~p~-p~i~W~k~--~~~~-l~~~~----~~~~~~r~~~~~~g---~L~I~~v~~~D~~G~Y~C~a~n 150 (167)
++.|.|.+.+ .|. |.+.|+|. +... +.... .....+|+.+..++ .|.|.+++.+|+ |.|.|.|.|
T Consensus 166 ~v~L~C~~~~---~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~Ds-G~Y~C~~~~ 241 (256)
T 3juy_B 166 RATFSCRSSH---SIRSRRVAWYQHKPGQAPRLVIHGVSNRASGISDRFSGSGSGTDFTLTITRVEPEDF-ALYYCQVYG 241 (256)
T ss_dssp CEEEEEEESS---CCTTCCEEEEEECTTSCCEEEEETTTEECTTCCTTEEEEEETTEEEEEESSCCGGGC-SEEEEEECC
T ss_pred CEEEEEEECC---CcCCeeEEEEEECCCCCcEEEEEecCccCCccCCcEEEEccCCEEEEEECCCCHhHC-EEEEEEEee
Confidence 9999999985 354 88999983 2111 11000 00123566654433 599999999999 999999999
Q ss_pred cC
Q psy12724 151 RL 152 (167)
Q Consensus 151 ~~ 152 (167)
..
T Consensus 242 ~~ 243 (256)
T 3juy_B 242 AS 243 (256)
T ss_dssp SS
T ss_pred CC
Confidence 54
No 119
>1e07_A Carcinoembryonic antigen; glycoprotein, CEA, tumour marker, immunoglobulin-fold; NMR {Homo sapiens} PDB: 2dks_A
Probab=99.64 E-value=3.2e-15 Score=129.27 Aligned_cols=131 Identities=15% Similarity=0.237 Sum_probs=96.9
Q ss_pred eeEEeEEEEEeCCcEEEEeecCCCCCCcceeeEEeeCCCceeeecCCceE------EEeeeEEEecC-------------
Q psy12724 14 EAQVYDVFVIKGNAAVFKCNLPSFVSDHLDVVSWADTDGGQYQIDNQDFV------VSQSYTVNIMD------------- 74 (167)
Q Consensus 14 ~~~~~~~~v~~G~~~~l~C~a~~~~~~~~~~i~W~k~~~~~~~~~~~~~v------~~g~y~c~~~~------------- 74 (167)
...+.+..+.+|+++.|.|.+.+.|.+ .++|+|++. .+..+....+ ..|.|+|.+.+
T Consensus 385 ~~~~~~~~~~~g~~~~l~C~~~g~p~~---~i~W~~~g~-~~~~~~~L~i~~~~~~d~G~Y~C~a~n~~g~~~~s~~~~v 460 (642)
T 1e07_A 385 TISPSYTYYRPGVNLSLSCHAASNPPA---QYSWLIDGN-IQQHTQELFISNITEKNSGLYTCQANNSASGHSRTTVKTI 460 (642)
T ss_pred eecCCceEecCCCcEEEEEEcCccCCC---eEEEEECCE-EcCCCceEEEccCChhhCeEEEEEEEcCCCCCcccceEEE
Confidence 455667788999999999999987754 799999853 3322221111 37999998743
Q ss_pred ----------------eEEEeCCcEEEEeeeCCccCCcceeEEEEeCCCeeeEEeeeecCCceEEEcc-CCeEEEeecCc
Q psy12724 75 ----------------EHVLKGNSAVLKCHIPSFVADYVAVESWISDQGEELFVDMTESTDGKYLVLP-SGELHIRDVGP 137 (167)
Q Consensus 75 ----------------~~v~~G~~a~l~C~~~~~~~~p~p~i~W~k~~~~~l~~~~~~~~~~r~~~~~-~g~L~I~~v~~ 137 (167)
..+.+|+++.|.|.+.+ |.|.++|+|++ ..+. ...|+.+.. ++.|.|.+++.
T Consensus 461 ~v~~~~~~p~i~~~~~~~v~~g~~v~l~C~~~~----~~~~i~W~~~g-~~l~------~~~~~~~~~~~~~L~i~~v~~ 529 (642)
T 1e07_A 461 TVSAELPKPSISSNNSKPVEDKDAVAFTCEPEA----QNTTYLWWVNG-QSLP------VSPRLQLSNGNRTLTLFNVTR 529 (642)
T ss_pred EEeccCCCceEecCCceeecCCCeEEEEEECCC----CCcEEEEEECC-EeCC------CCCcEEEcCCCcEEEEeecCh
Confidence 12358999999999972 77899999997 4553 345666654 56899999999
Q ss_pred CCCCcceEEEeeecCc----ceEEEee
Q psy12724 138 EDGYKSYQCRTKHRLT----GETRLSA 160 (167)
Q Consensus 138 ~D~~G~Y~C~a~n~~~----~~~~l~~ 160 (167)
+|+ |.|+|.|.|... ..+.|.+
T Consensus 530 ~d~-G~Y~C~a~n~~g~~~s~~~~l~V 555 (642)
T 1e07_A 530 NDA-RAYVCGIQNSVSANRSDPVTLDV 555 (642)
T ss_pred hcC-ceEEEEeEcCCCCccCCCEEEEE
Confidence 999 999999999862 2355555
No 120
>2ghw_B Anti-SARS SCFV antibody, 80R; S protein, neutralizing antibody, virus/viral protein/antibiotic complex; 2.30A {Homo sapiens} SCOP: b.1.1.1 b.1.1.1
Probab=99.64 E-value=5e-15 Score=113.61 Aligned_cols=141 Identities=17% Similarity=0.241 Sum_probs=92.6
Q ss_pred eEEeEEEEEeCCcEEEEeecCCCCCCcceeeEEeeCC-Ccee-------------------------eecCC--c-eE--
Q psy12724 15 AQVYDVFVIKGNAAVFKCNLPSFVSDHLDVVSWADTD-GGQY-------------------------QIDNQ--D-FV-- 63 (167)
Q Consensus 15 ~~~~~~~v~~G~~~~l~C~a~~~~~~~~~~i~W~k~~-~~~~-------------------------~~~~~--~-~v-- 63 (167)
.++..+.|.+|+++.|.|.+.+.+.+ .+.+.|+|++ +..+ ..+.. . .+
T Consensus 7 ~~p~~~~v~~G~~v~L~C~~~g~p~~-~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~I 85 (247)
T 2ghw_B 7 VQSGGGVVQPGKSLRLSCAASGFAFS-SYAMHWVRQAPGKGLEWVAVISYDGSNKYYADSVKGRFTISRDNSKNTLYLQM 85 (247)
T ss_dssp EEECCEEECTTCCEEEEEEEESSCGG-GSCEEEEEECTTSCEEEEEEECTTSSCEEECTTTTTTEEEEEETTTTEEEEEE
T ss_pred EecCCEEEecCCcEEEEEEeccccCC-CceEEEEEeCCCCceEEEEEEecCCCceeeCccccCcEEEEEeCCCCEEEEEE
Confidence 45677899999999999999887632 2469999843 1110 00000 0 11
Q ss_pred ------EEeeeEEEecC------------------------------------------eEEEeCCcEEEEeeeCCccCC
Q psy12724 64 ------VSQSYTVNIMD------------------------------------------EHVLKGNSAVLKCHIPSFVAD 95 (167)
Q Consensus 64 ------~~g~y~c~~~~------------------------------------------~~v~~G~~a~l~C~~~~~~~~ 95 (167)
.+|.|.|.+.+ ..+.+|+++.|.|.+.+ .
T Consensus 86 ~~v~~~D~G~Y~C~~~n~~~~~~~~~~~~l~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~G~~v~L~C~~~~---~ 162 (247)
T 2ghw_B 86 NSLRAEDTAVYYCARDRSYYLDYWGQGTLVTVSSGGGGSGGGGSGGGGSETTLTQSPATLSLSPGERATLSCRASQ---S 162 (247)
T ss_dssp CSCCGGGCEEEEEEEEETTEEEEECCCEEEEECSCC------------CCCCEEEECSEEEECTTSCEEEEEEESS---C
T ss_pred CcCCHHHCEEEEEeeeccCCccccCCceEEEEecccccccccccCCCCcceEEEccCCEEEecCCCcEEEEEEeCC---C
Confidence 17999997632 12457999999999985 4
Q ss_pred cceeEEEEe--CCCeeeEEe-e-----eecCCceEEEccC---CeEEEeecCcCCCCcceEEEeeecC----cceEEEee
Q psy12724 96 YVAVESWIS--DQGEELFVD-M-----TESTDGKYLVLPS---GELHIRDVGPEDGYKSYQCRTKHRL----TGETRLSA 160 (167)
Q Consensus 96 p~p~i~W~k--~~~~~l~~~-~-----~~~~~~r~~~~~~---g~L~I~~v~~~D~~G~Y~C~a~n~~----~~~~~l~~ 160 (167)
|.|.++|+| ++ ..+... . .....+|+.+..+ +.|.|.+++.+|+ |.|.|.|.|.. +..++|.+
T Consensus 163 ~~~~v~W~k~~~g-~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~D~-G~Y~C~a~~~~~~~~g~~t~l~V 240 (247)
T 2ghw_B 163 VRSNLAWYQQKPG-QAPRPLIYDASTRATGIPDRFSGSGSGTDFTLTISRLEPEDF-AVYYCQQRSNWPPTFGQGTKVEV 240 (247)
T ss_dssp CTTCEEEEEECTT-SCCEEEEETTTEECTTCCTTEEEECSSSEEEEEECSCCGGGC-EEEEEEECSSSSCEECCCEEEEE
T ss_pred ccceEEEEEECCC-CCcEEEEEEeccCCCccCCCEEEecCCCeEEEEECcCCHHHC-EEEEEEEccCCCceEcCCEEEEE
Confidence 777999999 44 222100 0 0012356766533 3699999999999 99999999853 45566666
Q ss_pred e
Q psy12724 161 T 161 (167)
Q Consensus 161 ~ 161 (167)
.
T Consensus 241 ~ 241 (247)
T 2ghw_B 241 K 241 (247)
T ss_dssp C
T ss_pred C
Confidence 4
No 121
>3oq3_B IFN-alpha/beta binding protein C12R; mousepox virus, moscow strain, cytokine decoy RE virus/viral protein, type-1 interferon, soluble A/B-IFNR; HET: EPE; 2.10A {Ectromelia virus}
Probab=99.64 E-value=1.1e-15 Score=122.38 Aligned_cols=123 Identities=16% Similarity=0.207 Sum_probs=84.7
Q ss_pred EEEEeCCcEEEEeecCCCCCCcceeeEEeeCCCceeeecCCc------eE--------EEeeeEEEecCe----------
Q psy12724 20 VFVIKGNAAVFKCNLPSFVSDHLDVVSWADTDGGQYQIDNQD------FV--------VSQSYTVNIMDE---------- 75 (167)
Q Consensus 20 ~~v~~G~~~~l~C~a~~~~~~~~~~i~W~k~~~~~~~~~~~~------~v--------~~g~y~c~~~~~---------- 75 (167)
..+.+|+++.|.|.+.+.|. .|.+.|+|++. .+..+..+ .+ ..|.|+|.+.+.
T Consensus 138 ~~~~~G~~v~L~C~~~g~p~--~~~i~W~k~~~-~l~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~n~~~~g~~~~~~ 214 (329)
T 3oq3_B 138 LGTHDKYGIDLYCGILYAKH--YNNITWYKNNQ-ELIIDGTKYSQSGQNLIIHNPELEDSGRYDCYVHYDDVRIKNDIVV 214 (329)
T ss_dssp TTSSTTTCEEEECCCCSCCC--CCEEEEEETTE-ECCCSSSSEEEETTEEEECSCCGGGCEEEEEEEEECCTTSSSCEEE
T ss_pred eEEeCCCcEEEEeccCCCCC--CceEEEEECCc-cCCCCCceEecCCCEEEEeecChhhCEEEEEEEEecccCCCceeEE
Confidence 33567999999999998872 24799999865 33221111 11 269999987621
Q ss_pred ------------------------EEEeCCcEEEEeeeCCccCCcce-eEEEEeCCCeeeEEeeeecCCceEEEc-----
Q psy12724 76 ------------------------HVLKGNSAVLKCHIPSFVADYVA-VESWISDQGEELFVDMTESTDGKYLVL----- 125 (167)
Q Consensus 76 ------------------------~v~~G~~a~l~C~~~~~~~~p~p-~i~W~k~~~~~l~~~~~~~~~~r~~~~----- 125 (167)
.+.+|+++.|.|.+.+....+.| .++|+|++. .+.+. +.+....
T Consensus 215 s~~~~l~V~~~~~~~~~~~~~~~~~v~~G~~~~l~C~~~g~p~~~~~i~v~W~~~g~-~i~~~-----~~~~~~~~~~~~ 288 (329)
T 3oq3_B 215 SRCKILTVIPSQDHRFKLILDPKINVTIGEPANITCTAVSTSLLVDDVLIDWENPSG-WIIGL-----DFGVYSILTSSG 288 (329)
T ss_dssp EEEEEEEEECCCCCCEEEECCSEEEECTTSCEEEEEEEEETTCCTTCCEEEEECTTS-CBCCB-----CSSEEEEEEEET
T ss_pred EeeEEEEEECCCCCCCceecCCeeEEecCCCEEEEEEEEECCCCCCCcEEEEEECCe-eeecc-----CCceeeeecccC
Confidence 22469999999999854111277 889999974 43221 2221111
Q ss_pred --cCCeEEEeecCcCCCCc-ceEEEeeecC
Q psy12724 126 --PSGELHIRDVGPEDGYK-SYQCRTKHRL 152 (167)
Q Consensus 126 --~~g~L~I~~v~~~D~~G-~Y~C~a~n~~ 152 (167)
.++.|.|.+++.+|+ | .|+|.|.|..
T Consensus 289 ~~~~~~L~I~~v~~~D~-G~~Y~C~a~N~~ 317 (329)
T 3oq3_B 289 GITEATLYFENVTEEYI-GNTYTCRGHNYY 317 (329)
T ss_dssp TEEEEEEEESSCCGGGT-TCEEEEEEECSS
T ss_pred ceeEeEEEEEeccHHHC-CCcEEEEEEecC
Confidence 356899999999998 9 9999999987
No 122
>1svz_A Immunoglobulin;, single-chain FV fragment 1696; antibody-antigen complex, HIV inhibiting antibody; 1.89A {Mus musculus} PDB: 1jp5_A
Probab=99.63 E-value=1.4e-14 Score=111.17 Aligned_cols=138 Identities=15% Similarity=0.221 Sum_probs=89.7
Q ss_pred eeeEEeEEEEEeCCcEEEEeecCCCCCC--cceeeEEeeCC-Cce---eeec--------CCc----------eE-----
Q psy12724 13 YEAQVYDVFVIKGNAAVFKCNLPSFVSD--HLDVVSWADTD-GGQ---YQID--------NQD----------FV----- 63 (167)
Q Consensus 13 ~~~~~~~~~v~~G~~~~l~C~a~~~~~~--~~~~i~W~k~~-~~~---~~~~--------~~~----------~v----- 63 (167)
+...|.++.|.+|+++.|.|.+.+.+.. ..+.+.|+|++ +.. +... ..| .+
T Consensus 4 v~~~p~~~~v~~G~~v~L~C~~~~~~~~~~~~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v 83 (247)
T 1svz_A 4 MTQTPLYLPVSLGDQASISCRSSQTIVHNNGNTYLEWYLQKPGQSPQLLIYKVSNRFSGVPDRFSGSGSGTDFTLKISRV 83 (247)
T ss_dssp EEEECSEEEECTTCCEEEEEEESSCCBCTTSCBCEEEEEECTTSCEEEEEETTTEECTTCCTTEEEEEETTEEEEEESSC
T ss_pred EEecCCeEEecCCCCEEEEEeCCCcccccCCCceEEEEEECCCCCceEEEEEecccCCCCCCcEEeccCCCEEEEEECCC
Confidence 4567888999999999999999877620 02479999853 211 1100 011 11
Q ss_pred ---EEeeeEEEecC---------------------------------------eEEEeCCcEEEEeeeCCccCCcceeEE
Q psy12724 64 ---VSQSYTVNIMD---------------------------------------EHVLKGNSAVLKCHIPSFVADYVAVES 101 (167)
Q Consensus 64 ---~~g~y~c~~~~---------------------------------------~~v~~G~~a~l~C~~~~~~~~p~p~i~ 101 (167)
.+|.|.|.+.+ ..+.+|++|.|.|.+.+. ..|.+.+.
T Consensus 84 ~~~D~G~Y~C~~~n~~~~~~~~~~~l~V~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~G~~v~L~C~~~~~-~~~~~~v~ 162 (247)
T 1svz_A 84 EAEDLGIYYCFQGSHFPPTFGGGTKLEIKGGGGSGGGGSGGGGSEVQLQQSGPELKKPGETVKISCKATNY-AFTDYSMH 162 (247)
T ss_dssp CGGGCEEEEEEECSSSSCEECCCEEEEEC---------------CCEEEECCCEEECTTCCEEEEEEEESS-CGGGSCEE
T ss_pred CHHHCEEEEEEEccCCccEECCCEEEEEECCccccccccccccCceEEeCCCceeecCCCcEEEEEEEcCc-ccCCcEEE
Confidence 27999998632 124569999999999753 11357899
Q ss_pred EEeCC-Ceee--EEeee---------ecCCceEEEcc-----CCeEEEeecCcCCCCcceEEEeeecC
Q psy12724 102 WISDQ-GEEL--FVDMT---------ESTDGKYLVLP-----SGELHIRDVGPEDGYKSYQCRTKHRL 152 (167)
Q Consensus 102 W~k~~-~~~l--~~~~~---------~~~~~r~~~~~-----~g~L~I~~v~~~D~~G~Y~C~a~n~~ 152 (167)
|+|++ +..+ ..... ....+|+.+.. .+.|.|++++.+|+ |.|.|.|.|..
T Consensus 163 W~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~I~~v~~~Ds-G~Y~C~a~n~~ 229 (247)
T 1svz_A 163 WVKQAPGGDLKYVGWINTETDEPTFADDFKGRFAFSLDTSTSTAFLQINNLKNEDT-ATYFCVRDRHD 229 (247)
T ss_dssp EEEECTTCCEEEEEEECTTTCCEEECGGGSSSEEEEEEGGGTEEEEEECSCCGGGC-EEEEEEEEEGG
T ss_pred EEEeCCCCCcEEEEEEEcCCCccccCccccCcEEEEEecCCCEEEEEECCCChhHC-EEEEEEEeccC
Confidence 99963 1111 10000 01145776653 24799999999999 99999999963
No 123
>1bih_A Hemolin; insect immunity, LPS-binding, homophilic adhesion; 3.10A {Hyalophora cecropia} SCOP: b.1.1.4 b.1.1.4 b.1.1.4 b.1.1.4
Probab=99.63 E-value=3.9e-16 Score=126.57 Aligned_cols=133 Identities=19% Similarity=0.266 Sum_probs=97.8
Q ss_pred eceeeEEeEEEEEeCCcEEEEeecCC-CCCCcceeeEEeeCCCceeeecC----------CceE------EEeeeEEEec
Q psy12724 11 QYYEAQVYDVFVIKGNAAVFKCNLPS-FVSDHLDVVSWADTDGGQYQIDN----------QDFV------VSQSYTVNIM 73 (167)
Q Consensus 11 ~~~~~~~~~~~v~~G~~~~l~C~a~~-~~~~~~~~i~W~k~~~~~~~~~~----------~~~v------~~g~y~c~~~ 73 (167)
+.|...|.+..+.+|+++.|.|.+.+ .+. +.+.|+|++. .+..+. ...+ ..|.|+|.+.
T Consensus 7 P~~~~~p~~~~v~~G~~v~l~C~~~~~~p~---~~v~W~k~g~-~~~~~~~~~~~~~~~~~L~i~~~~~~D~G~Y~C~a~ 82 (395)
T 1bih_A 7 PVLKDQPAEVLFRENNPTVLECIIEGNDQG---VKYSWKKDGK-SYNWQEHNAALRKDEGSLVFLRPQASDEGHYQCFAE 82 (395)
T ss_dssp CEECCCCSEEEEETTSCEEECCCEESCCSS---CEEEEEESSS-BCCTTTTTEEECTTSCCEEESSCCGGGCEEEEEEEE
T ss_pred CEeecCCCceEEeCCCEEEEEEEEecCCCC---ceEEEEECCc-CcccccceEEEecCCceEEEecCCCCCCcEEEEEEE
Confidence 45888899999999999999999988 443 5899999854 333211 1111 2799999874
Q ss_pred C--------------------------eEEEeCCcEEEEeeeCCccCCcceeEEEEeCCC--eeeEEeeeecCCceEEEc
Q psy12724 74 D--------------------------EHVLKGNSAVLKCHIPSFVADYVAVESWISDQG--EELFVDMTESTDGKYLVL 125 (167)
Q Consensus 74 ~--------------------------~~v~~G~~a~l~C~~~~~~~~p~p~i~W~k~~~--~~l~~~~~~~~~~r~~~~ 125 (167)
+ ..+.+|+++.|.|.+.. +.|.|.++|+|++. .+.... .....++...
T Consensus 83 n~~g~~~s~~~~l~v~~~~~p~~~~~~~~~~~G~~v~l~C~~~~--~~p~~~v~W~~~~~~~~~~~~~--~~~~~~~~~~ 158 (395)
T 1bih_A 83 TPAGVASSRVISFRKTYLIASPAKTHEKTPIEGRPFQLDCVLPN--AYPKPLITWKKRLSGADPNADV--TDFDRRITAG 158 (395)
T ss_dssp ETTEEEECCCEEEEEEEEECCCCEEEEECCBTTEEEEECCCCCE--EESCCEEEEEEEETTSCGGGCC--CCCCTTEEEC
T ss_pred eCCCeEEeEEEEEEEEEeecCCcCCcceeeeeCCcEEEEecCCC--CCCCCeEEEEecCCCcCccccc--ccccccEEEc
Confidence 3 12347999999999732 45889999999851 111100 0115678888
Q ss_pred cCCeEEEeecCcCCCCc---ceEEEeeecC
Q psy12724 126 PSGELHIRDVGPEDGYK---SYQCRTKHRL 152 (167)
Q Consensus 126 ~~g~L~I~~v~~~D~~G---~Y~C~a~n~~ 152 (167)
.+|.|.|.+++.+|+ | .|+|.|.|..
T Consensus 159 ~~~~L~i~~v~~~d~-G~~~~Y~C~a~n~~ 187 (395)
T 1bih_A 159 PDGNLYFTIVTKEDV-SDIYKYVCTAKNAA 187 (395)
T ss_dssp TTSCEEEEEECGGGC-CSSEEEEEEEECTT
T ss_pred CCCcEEEEEEeeccC-CCceEEEEEEEecc
Confidence 899999999999999 9 9999999987
No 124
>1qok_A MFE-23 recombinant antibody fragment; immunoglobulin, single-chain FV, anti-carcinoembryonic antigen; 2.4A {Mus musculus} SCOP: b.1.1.1 b.1.1.1
Probab=99.63 E-value=5.1e-15 Score=116.63 Aligned_cols=149 Identities=16% Similarity=0.262 Sum_probs=95.8
Q ss_pred EeeeceeeEEeEEEEEeCCcEEEEeecCCCCCCcceeeEEeeCC-Ccee---e-ec------------CCc---------
Q psy12724 8 VISQYYEAQVYDVFVIKGNAAVFKCNLPSFVSDHLDVVSWADTD-GGQY---Q-ID------------NQD--------- 61 (167)
Q Consensus 8 v~~~~~~~~~~~~~v~~G~~~~l~C~a~~~~~~~~~~i~W~k~~-~~~~---~-~~------------~~~--------- 61 (167)
...+....+|.++.+.+|+++.|.|.+.+.+.+ .+.+.|+|++ +..+ . .+ ..|
T Consensus 24 ~~~~~~~~~p~~~~v~~G~~v~L~C~~~g~~~~-~~~v~W~r~~~~~~~~~l~~~~~~~~~~~~~~~~~~R~~~~~~~~~ 102 (282)
T 1qok_A 24 AMAQVKLQQSGAELVRSGTSVKLSCTASGFNIK-DSYMHWLRQGPEQGLEWIGWIDPENGDTEYAPKFQGKATFTTDTSS 102 (282)
T ss_dssp ---CCEEEECCCEEEETTCCEEEEEEEESSCGG-GSCEEEEEECTTCCEEEEEEEETTTTEEEECGGGBTTEEEEEETTT
T ss_pred ccceEEEECCCCEEEeCCCeEEEEEeccCCCCC-CceEEEEEeCCCCCcEEEEEEecCCCccccCchhcCcEEEEEecCC
Confidence 334556678889999999999999999876521 2479999864 1111 0 00 001
Q ss_pred ---eE--------EEeeeEEEecCe---------------------------------------------EEEeCCcEEE
Q psy12724 62 ---FV--------VSQSYTVNIMDE---------------------------------------------HVLKGNSAVL 85 (167)
Q Consensus 62 ---~v--------~~g~y~c~~~~~---------------------------------------------~v~~G~~a~l 85 (167)
.+ .+|.|.|.+.+. .+.+|+++.|
T Consensus 103 ~~~sL~I~~v~~~DsG~Y~C~~~n~~g~~~~~~~~~~~~L~V~~~~~~~~~~~~~~~~~~~~~~~~p~~~~v~~G~~v~L 182 (282)
T 1qok_A 103 NTAYLQLSSLTSEDTAVYYCNEGTPTGPYYFDYWGQGTTVTVSSGGGGSGGGGSGGGGSENVLTQSPAIMSASPGEKVTI 182 (282)
T ss_dssp TEEEEEECSCCGGGCEEEEEEEECSSSSCCCEEECCCEEEEEEC---------------CCCEEEECSEEEECTTCCEEE
T ss_pred CeEEEEECcCChhhCEEEEEEeccCCCccceeeeCCCEEEEEecCCcccCCccCCCCccceEEecCCCEEEEcCCCcEEE
Confidence 11 169999976321 2456999999
Q ss_pred EeeeCCccCCcceeEEEEe--CCCeeeEE--ee----eecCCceEEEcc---CCeEEEeecCcCCCCcceEEEeeecC--
Q psy12724 86 KCHIPSFVADYVAVESWIS--DQGEELFV--DM----TESTDGKYLVLP---SGELHIRDVGPEDGYKSYQCRTKHRL-- 152 (167)
Q Consensus 86 ~C~~~~~~~~p~p~i~W~k--~~~~~l~~--~~----~~~~~~r~~~~~---~g~L~I~~v~~~D~~G~Y~C~a~n~~-- 152 (167)
.|.+.+ .| |.++|+| ++ ..+.. .. .....+||.+.. .+.|.|++++.+|+ |.|.|.|.|..
T Consensus 183 ~C~~~~---~~-~~v~W~k~~~g-~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~Ds-G~Y~C~a~~~~~~ 256 (282)
T 1qok_A 183 TCSASS---SV-SYMHWFQQKPG-TSPKLWIYSTSNLASGVPARFSGSGSGTSYSLTISRMEAEDA-ATYYCQQRSSYPL 256 (282)
T ss_dssp EEEESS---CC-SCCEEEEECTT-SCCEEEEETTTEECTTCCTTEEEEEETTEEEEEESSCCGGGC-EEEEEEECSSSSC
T ss_pred EEEecC---CC-ceEEEEEECCC-CCcEEEEEEecCCCCcccCCeEEecCCCEEEEEEccCChhHC-EEEEEEEeeCCCc
Confidence 999985 46 8899999 44 22211 00 001135676542 33799999999999 99999999843
Q ss_pred --cceEEEeeeCC
Q psy12724 153 --TGETRLSATKG 163 (167)
Q Consensus 153 --~~~~~l~~~~~ 163 (167)
+..++|.+.+.
T Consensus 257 ~fg~gt~l~V~~~ 269 (282)
T 1qok_A 257 TFGAGTKLELKRA 269 (282)
T ss_dssp EECCCEEEEEC--
T ss_pred eEeCCEEEEEecc
Confidence 55677777543
No 125
>3qs7_E FL cytokine receptor; immunoglobulin-like domain, four-helical bundle cytokine, CY receptor complex, extracellular complex; HET: NAG; 4.30A {Homo sapiens}
Probab=99.63 E-value=1.1e-15 Score=127.72 Aligned_cols=121 Identities=8% Similarity=0.080 Sum_probs=83.2
Q ss_pred EeEEEEEeCCcEEEEeecCCCCCCcceeeEEeeCCCceeeec---------CCc------eE--------EEeeeEEEec
Q psy12724 17 VYDVFVIKGNAAVFKCNLPSFVSDHLDVVSWADTDGGQYQID---------NQD------FV--------VSQSYTVNIM 73 (167)
Q Consensus 17 ~~~~~v~~G~~~~l~C~a~~~~~~~~~~i~W~k~~~~~~~~~---------~~~------~v--------~~g~y~c~~~ 73 (167)
+.+..+.+|+++.|.|.+.+.+.+ |.|+|+|++.. +... +.+ .+ .+|.|+|.+.
T Consensus 234 ~~~~~v~~G~~v~L~C~~~g~~p~--p~i~W~k~g~~-l~~~~~~~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~A~ 310 (423)
T 3qs7_E 234 LPQLFLKVGEPLWIRCKAVHVNHG--FGLTWELENKA-LEEGNYFEMSTYSTNRTMIRILFAFVSSVARNDTGYYTCSSS 310 (423)
T ss_dssp TTEEEEETTSCEEEEEEEEESSSC--CCEEEEESSSB-CCGGGEEEEEEEETTTEEEEEEEEEESSCCTTTCEEEEEEET
T ss_pred CCceEEeCCCeEEEEEEEEcCCCC--cEEEEEECCEE-ccccceeecccccCCceeEEEEEEEEeecCHHHCEEEEEEEe
Confidence 447789999999999999874332 47999998653 2111 111 11 2799999886
Q ss_pred Ce------------------------EEEeCCcEEEEeeeCCccCCcceeEEEEeCCCeeeEEeeeecCCceEEEccCCe
Q psy12724 74 DE------------------------HVLKGNSAVLKCHIPSFVADYVAVESWISDQGEELFVDMTESTDGKYLVLPSGE 129 (167)
Q Consensus 74 ~~------------------------~v~~G~~a~l~C~~~~~~~~p~p~i~W~k~~~~~l~~~~~~~~~~r~~~~~~g~ 129 (167)
|. .+.+|+++.|.|.+.+ .|.|.++|+||+ ..+.. +.+. ...+-.
T Consensus 311 N~~~~~~~L~V~~~p~i~~~~~~~~~~v~~G~~v~l~C~~~g---~P~p~i~W~k~g-~~l~~------~~~~-~~~~~~ 379 (423)
T 3qs7_E 311 KHPSQSALVTIVEKGFINATNSSEDYEIDQYEEFCFSVRFKA---YPQIRCTWTFSR-KSFPC------EQKG-LDNGYS 379 (423)
T ss_dssp TEEEEEEEEEEESSCEEEEC---CEECCCTTCCCCEEEEEEE---ESCCEEEEEETT-EEEEC------BCCB-CSSSSE
T ss_pred cCCCceEEEEEEeCCcceEcCCCccEEecCCCeEEEEEEEEE---cCCCeEEEEECC-EECCC------cccc-ccCCcE
Confidence 52 1246899999999984 489999999997 56632 1110 001112
Q ss_pred EEEeecCcCCCCcceEEEeeecC
Q psy12724 130 LHIRDVGPEDGYKSYQCRTKHRL 152 (167)
Q Consensus 130 L~I~~v~~~D~~G~Y~C~a~n~~ 152 (167)
+.+.+...+|+ |.|+|.|.|..
T Consensus 380 ~~~~~~~~~D~-G~YtC~A~N~~ 401 (423)
T 3qs7_E 380 ISKFCNHKHQP-GEYIFHAENDD 401 (423)
T ss_dssp EEEECCCTTCC-SCEEEEEEETT
T ss_pred EEEEecccccC-EEEEEEEEcCC
Confidence 23366778999 99999999998
No 126
>3umt_A SCFV heavy chain and light chain; stability engineering, anthrax, anti-BCLA antibody, immunoglobulin fold (VH and VL domains), antibody, immune S; HET: NHE; 1.80A {Mus musculus} PDB: 1xiw_D
Probab=99.63 E-value=3.5e-15 Score=115.51 Aligned_cols=144 Identities=17% Similarity=0.270 Sum_probs=92.1
Q ss_pred eEEeEEEEEeCCcEEEEeecCCCCCCcceeeEEeeCC-Ccee--e--ec------------CCc------------eE--
Q psy12724 15 AQVYDVFVIKGNAAVFKCNLPSFVSDHLDVVSWADTD-GGQY--Q--ID------------NQD------------FV-- 63 (167)
Q Consensus 15 ~~~~~~~v~~G~~~~l~C~a~~~~~~~~~~i~W~k~~-~~~~--~--~~------------~~~------------~v-- 63 (167)
.++..+.+.+|+++.|.|.+.+.+.. .+.+.|+|.. +..+ . .+ ..| .+
T Consensus 7 ~~~~~~~v~~G~~v~L~C~~~~~~~~-~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~I 85 (256)
T 3umt_A 7 QQSGLELVKPGASVKISCKTSGYTFT-EYTMHWVKQSHGKSLEWIGGINPNNGGTSYNQKFKGKAILTVDKSSSTAYLEL 85 (256)
T ss_dssp EECCCEEECTTCCEEEEEEEESSCGG-GSCEEEEEECTTSCEEEEEEECTTTCCEEECGGGTTTEEEEEEGGGTEEEEEE
T ss_pred EccCceEEcCCCCEEEEEEEeccccc-ccEEEEEEECCCCCcEEEEEEeccCCcccccccccceEEEEEecCCCEEEEEE
Confidence 34556789999999999999876522 2479998742 2211 0 00 001 01
Q ss_pred ------EEeeeEEEecC---------------------------------------------eEEEeCCcEEEEeeeCCc
Q psy12724 64 ------VSQSYTVNIMD---------------------------------------------EHVLKGNSAVLKCHIPSF 92 (167)
Q Consensus 64 ------~~g~y~c~~~~---------------------------------------------~~v~~G~~a~l~C~~~~~ 92 (167)
.+|.|.|.+.+ ..+.+|++++|.|.+.+
T Consensus 86 ~~v~~~DsG~Y~C~~~~~~~~~~~~~~~~~~L~V~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~v~~G~~v~L~C~~~~- 164 (256)
T 3umt_A 86 RSLTSEDSAVYYCARDDRYPAWFAYWGQGTTVTVSSGGGGSGGGGSGGGGSTDIQLTQSPSSLSASLGERVSITCRASQ- 164 (256)
T ss_dssp CSCCGGGCEEEEEEECCSTTCCSCEECCCEEEEECC---------------CCCCEEEECSEEEECTTCCEEEEEEESS-
T ss_pred CCCCcccCEEEEEEEccCCCccccEECCCEEEEEcCCCccccCcccCCCCccccEEEcCCCeEEEECCCCEEEEEEEec-
Confidence 17999997632 13457999999999984
Q ss_pred cCCcceeEEEEeCC-CeeeEE-ee-----eecCCceEEEccCC---eEEEeecCcCCCCcceEEEeeecC----cceEEE
Q psy12724 93 VADYVAVESWISDQ-GEELFV-DM-----TESTDGKYLVLPSG---ELHIRDVGPEDGYKSYQCRTKHRL----TGETRL 158 (167)
Q Consensus 93 ~~~p~p~i~W~k~~-~~~l~~-~~-----~~~~~~r~~~~~~g---~L~I~~v~~~D~~G~Y~C~a~n~~----~~~~~l 158 (167)
.|.|.+.|+|+. +..+.. .. .....+|+.+..++ .|.|.+++.+|+ |.|.|.|.|.. +..++|
T Consensus 165 --~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~D~-G~Y~C~~~~~~~~~fg~gt~L 241 (256)
T 3umt_A 165 --DIGSNLNWLQQKPDGTIKRLIYATSSLDSGVPKRFSGSRSGSDYSLTISSLESEDF-VDYYCLQYASSPPTFGGGTKL 241 (256)
T ss_dssp --CCTTCEEEEEECTTCCEEEEEETTTEECTTSCTTEEEEEETTEEEEEECSCCGGGC-SEEEEEECSSSSCEECCCEEE
T ss_pred --CCCcEEEEEEECCCCCcEEEEEeccccCCccCCCEEEecCCCEEEEEECCCChhHC-EEEEEEEeeCCCcEECCCEEE
Confidence 477799999842 111110 00 00113566654333 599999999999 99999999854 556777
Q ss_pred eeeCC
Q psy12724 159 SATKG 163 (167)
Q Consensus 159 ~~~~~ 163 (167)
++.+.
T Consensus 242 ~V~~~ 246 (256)
T 3umt_A 242 EIKRA 246 (256)
T ss_dssp EEC--
T ss_pred EEECC
Confidence 77543
No 127
>1lk3_L 9D7 light chain; antigen-antibody complex, immune system; 1.91A {Rattus norvegicus} SCOP: b.1.1.1 b.1.1.2 PDB: 1fn4_A 1c5d_L 1bfo_A 3b9k_L*
Probab=99.62 E-value=1.4e-15 Score=113.98 Aligned_cols=127 Identities=20% Similarity=0.279 Sum_probs=84.2
Q ss_pred EeEEEEEeCCcEEEEeecCCCCCCcceeeEEeeCC-Ccee---e------ec--CCc----------eE--------EEe
Q psy12724 17 VYDVFVIKGNAAVFKCNLPSFVSDHLDVVSWADTD-GGQY---Q------ID--NQD----------FV--------VSQ 66 (167)
Q Consensus 17 ~~~~~v~~G~~~~l~C~a~~~~~~~~~~i~W~k~~-~~~~---~------~~--~~~----------~v--------~~g 66 (167)
|.++.+.+|+++.|.|.+.+.+. +.+.|+|++ +..+ . .. ..+ .+ .+|
T Consensus 7 p~~~~v~~G~~v~L~C~~~~~~~---~~v~W~~~~~g~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~D~G 83 (210)
T 1lk3_L 7 PPALTVSPGEKLTISCKASESVT---SRMHWYQQKPGQQPKLLIYKASNLASGVPARFSGSGSGTDFTLTIDPVEADDTA 83 (210)
T ss_dssp CSEEEECTTSCEEEEEEESSCCT---TCEEEEEECTTSCCEEEEETTTEECTTCCTTEEEEEETTEEEEEESSCCGGGCE
T ss_pred CCcEEEcCCCCEEEEeeCCCccC---CCEEEEEECCCCCeEEEEEccccccCCccccEEEEecCCEEEEEECCCCHHHCe
Confidence 78899999999999999988764 369998853 2111 0 00 011 11 279
Q ss_pred eeEEEecCe-----------E---------E---------EeCCcEEEEeeeCCccCCcce-eEEEEeCCCeeeEEe-e-
Q psy12724 67 SYTVNIMDE-----------H---------V---------LKGNSAVLKCHIPSFVADYVA-VESWISDQGEELFVD-M- 114 (167)
Q Consensus 67 ~y~c~~~~~-----------~---------v---------~~G~~a~l~C~~~~~~~~p~p-~i~W~k~~~~~l~~~-~- 114 (167)
.|.|.+.+. . + ..|+++.|.|.+.+. .|.| .++|+||+ ..+... .
T Consensus 84 ~Y~C~~~~~~~~~~~~~~~l~V~~~~~~P~v~~~~~~~~~~~g~~v~l~C~~~g~--~p~~~~v~W~k~g-~~~~~~~~~ 160 (210)
T 1lk3_L 84 IYFCQQSWNGPLTFGAGTKLELKRADAAPTVSIFPPSTEQLATGGASVVCLMNNF--YPRDISVKWKIDG-TERRDGVLD 160 (210)
T ss_dssp EEEEEECSSSSCEECCCEEEEECCCCBCCEEEEECCCHHHHTTTEEEEEEEEEEE--BSSCCEEEEEETT-EECCTTEEE
T ss_pred EEEEEEEcCCCceeCCCEEEEEcCCCcCCeEEEECCchhhccCCcEEEEEEEEeE--eCCceEEEEEeCC-ccCCCCceE
Confidence 999987430 0 1 148899999999753 2544 79999997 454211 0
Q ss_pred ----eecCCceEEEccCCeEEEeecCcCCCCcceEEEeeecC
Q psy12724 115 ----TESTDGKYLVLPSGELHIRDVGPEDGYKSYQCRTKHRL 152 (167)
Q Consensus 115 ----~~~~~~r~~~~~~g~L~I~~v~~~D~~G~Y~C~a~n~~ 152 (167)
....++.|.. ...|.|.+++.+|+ |.|+|.|.|..
T Consensus 161 ~~~~~~~~~~~~~~--~s~L~i~~~~~~d~-G~Y~C~a~n~~ 199 (210)
T 1lk3_L 161 SVTDQDSKDSTYSM--SSTLSLTKADYESH-NLYTCEVVHKT 199 (210)
T ss_dssp EECCCCTTTCCEEE--EEEEEEEHHHHHTC-CEEEEEEECTT
T ss_pred ccCCccCCCCCEEE--EEEEEEChHHhccC-CcEEEEEEecC
Confidence 0001122221 13699999999999 99999999986
No 128
>1waa_A Titin; metal binding protein, calmodulin-binding, cytoskeleton, immunoglobulin domain, muscle protein, phosphorylation, repeat; 1.80A {Homo sapiens} PDB: 1waa_E 1waa_F 1tit_A 1tiu_A 2rq8_A
Probab=99.62 E-value=1.3e-15 Score=102.22 Aligned_cols=81 Identities=10% Similarity=0.124 Sum_probs=63.5
Q ss_pred eEEEecCeEEEeCCcEEEEeeeCCccCCcceeEEEEeCCCeeeEEeeeecCCceEEEccCC---eEEEeecCcCCCCcce
Q psy12724 68 YTVNIMDEHVLKGNSAVLKCHIPSFVADYVAVESWISDQGEELFVDMTESTDGKYLVLPSG---ELHIRDVGPEDGYKSY 144 (167)
Q Consensus 68 y~c~~~~~~v~~G~~a~l~C~~~~~~~~p~p~i~W~k~~~~~l~~~~~~~~~~r~~~~~~g---~L~I~~v~~~D~~G~Y 144 (167)
+.-.+.+..+.+|++|.|.|.+.+ |.|.++|+||+ ..+. .+.|+.+..+| .|.|++++.+|+ |.|
T Consensus 8 ~~~~~~~~~v~~G~~v~l~C~v~~----~~~~v~W~k~g-~~i~------~~~~~~i~~~g~~~~L~I~~v~~~D~-G~Y 75 (93)
T 1waa_A 8 VEKPLYGVEVFVGETAHFEIELSE----PDVHGQWKLKG-QPLA------ASPDCEIIEDGKKHILILHNCQLGMT-GEV 75 (93)
T ss_dssp EEECCCCEEEETTSCEEEEEEESS----SSCCCEEEETT-EECC------CBTTEEEEEETTEEEEEECSCCGGGC-EEE
T ss_pred eeccCcceEEeCCCCEEEEEEECC----CCCeEEEEECC-EECc------CCCCEEEEEECCEEEEEECCCChhhC-EEE
Confidence 334456788999999999999963 44779999997 5663 34677776655 699999999999 999
Q ss_pred EEEeeecCcceEEEeee
Q psy12724 145 QCRTKHRLTGETRLSAT 161 (167)
Q Consensus 145 ~C~a~n~~~~~~~l~~~ 161 (167)
+|.|.|.. ..+.|.+.
T Consensus 76 ~C~a~n~~-~sa~L~V~ 91 (93)
T 1waa_A 76 SFQAANTK-SAANLKVK 91 (93)
T ss_dssp EEEETTEE-EEEEEEEE
T ss_pred EEEECCCc-EEEEEEEE
Confidence 99999974 56666664
No 129
>4dkd_C Macrophage colony-stimulating factor 1 receptor; dimeric four-helix bundle cytokine, receptor tyrosine kinase glycosylation; HET: NAG BMA; 3.00A {Homo sapiens}
Probab=99.62 E-value=7.9e-16 Score=119.99 Aligned_cols=141 Identities=16% Similarity=0.198 Sum_probs=93.1
Q ss_pred eeeEEeEEEEEeCCcEEEEeecCCCCCCcceeeEEeeCCCceeeecC--------CceE------EEeeeEEEecC----
Q psy12724 13 YEAQVYDVFVIKGNAAVFKCNLPSFVSDHLDVVSWADTDGGQYQIDN--------QDFV------VSQSYTVNIMD---- 74 (167)
Q Consensus 13 ~~~~~~~~~v~~G~~~~l~C~a~~~~~~~~~~i~W~k~~~~~~~~~~--------~~~v------~~g~y~c~~~~---- 74 (167)
|...+.+..+.+|+++.|.|.+.+ +.. .+.+.|+++++..+..+. ...+ ..|.|+|.+.+
T Consensus 92 ~~~~~~~~~v~~g~~v~l~C~~~~-~~~-~~~v~W~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~n~~~~ 169 (292)
T 4dkd_C 92 WNVLAQEVVVFEDQDALLPCLLTD-PVL-EAGVSLVRVRGRPLMRHTNYSFSPWHGFTIHRAKFIQSQDYQCSALMGGRK 169 (292)
T ss_dssp EEESCSEEEEETTSCEECCEEESS-GGG-GSSEEEEEGGGCCCCSSCCEECCSSSCCEETTCCGGGCSEEEEEECSTTSC
T ss_pred ccccCCeEEEcCCCcEEEeeeCCC-CCc-ceeEEEEecCCCccccCCcccccCCceEEECCCCHHHCeEEEEEEEeCCCc
Confidence 556677888999999999999987 321 247999998665443211 1111 27999998742
Q ss_pred --------------------------eEEEeCCcEEEEeeeCCccCCcceeEEEEeCCCeeeEEee-eecCCceEEEccC
Q psy12724 75 --------------------------EHVLKGNSAVLKCHIPSFVADYVAVESWISDQGEELFVDM-TESTDGKYLVLPS 127 (167)
Q Consensus 75 --------------------------~~v~~G~~a~l~C~~~~~~~~p~p~i~W~k~~~~~l~~~~-~~~~~~r~~~~~~ 127 (167)
..+.+|+++.|.|.+.+. .|.+.+.|++++. .+.... .....+++. .+
T Consensus 170 ~~s~~~~l~V~~~~~~~p~i~~~~~~~~~~~g~~v~l~C~~~~~--~~~~~~~w~~~~~-~~~~~~~~~~~~~~~~--~~ 244 (292)
T 4dkd_C 170 VMSISIRLKVQKVIPGPPALTLVPAELVRIRGEAAQIVCSASSV--DVNFDVFLQHNNT-KLAIPQQSDFHNNRYQ--KV 244 (292)
T ss_dssp EECCCEEEEEECCCCSSCEEEEESSCBCCCSSSCEEEEEEEEES--SSCCEEECCBSSC-CCCCCBEEEEETTEEE--EE
T ss_pred eeEEEEEEEEeCCCCCCCeEEccCCceeEecCCCEEEEEEecCC--CCceEEEEeCCCc-ccccCccceeccceee--eE
Confidence 112479999999999743 2446788988873 332100 000112221 34
Q ss_pred CeEEEeecCcCCCCcceEEEeeecC---cceEEEeee
Q psy12724 128 GELHIRDVGPEDGYKSYQCRTKHRL---TGETRLSAT 161 (167)
Q Consensus 128 g~L~I~~v~~~D~~G~Y~C~a~n~~---~~~~~l~~~ 161 (167)
+.|.|.+++.+|+ |.|+|.|.|.. +..+.|.+.
T Consensus 245 ~~L~i~~v~~~d~-G~Y~C~a~N~~g~~~~~~~l~V~ 280 (292)
T 4dkd_C 245 LTLNLDQVDFQHA-GNYSCVASNVQGKHSTSMFFRVV 280 (292)
T ss_dssp EEEEESSCCTTSC-EEEEEEEECSSCEEEEEEEECC-
T ss_pred EEEEECccChhcC-eEEEEEEecCCCCceeEEEEEEe
Confidence 5899999999998 99999999987 344555553
No 130
>1nqb_A Single-chain antibody fragment; multivalent antibody, diabody, domain SWA immunoglobulin; 2.00A {Mus musculus} SCOP: b.1.1.1 b.1.1.1 PDB: 1lmk_A 1qnz_H
Probab=99.62 E-value=1.7e-14 Score=112.22 Aligned_cols=143 Identities=18% Similarity=0.236 Sum_probs=94.0
Q ss_pred eeEEeEEEEEeCCcEEEEeecCCCCCCcceeeEEeeCC-Ccee---ee-c------------CCc------------eE-
Q psy12724 14 EAQVYDVFVIKGNAAVFKCNLPSFVSDHLDVVSWADTD-GGQY---QI-D------------NQD------------FV- 63 (167)
Q Consensus 14 ~~~~~~~~v~~G~~~~l~C~a~~~~~~~~~~i~W~k~~-~~~~---~~-~------------~~~------------~v- 63 (167)
..+|.++.|.+|+++.|.|.+.+.+.+ .+.+.|+|++ +..+ .. + ..| .+
T Consensus 4 l~~p~~~~v~~G~~v~L~C~~~g~~~~-~~~v~W~r~~~~~~~~~l~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~~L~ 82 (256)
T 1nqb_A 4 LQQSGAELVKPGASVKLSCKASGYTFT-SYWMHWVKQRPGRGLEWIGRIDPNSGGTKYNEKFKSKATLTVDKPSSTAYMQ 82 (256)
T ss_dssp EEECCCEEECTTCCEEEEEEECSSCGG-GSCEEEEEEETTTEEEEEEEECTTTCCEEECGGGTTTEEEEEETTTTEEEEE
T ss_pred EECCCCeeecCCCcEEEEEEeccccCC-CceEEEEEECCCCCcEEEEEEecCCCceeeCcccCCeEEEEEecCCCEEEEE
Confidence 356778899999999999999887522 2579999853 2111 00 0 011 11
Q ss_pred -------EEeeeEEEecCe------------------------------EEEeCCcEEEEeeeCCccCCcce-----eEE
Q psy12724 64 -------VSQSYTVNIMDE------------------------------HVLKGNSAVLKCHIPSFVADYVA-----VES 101 (167)
Q Consensus 64 -------~~g~y~c~~~~~------------------------------~v~~G~~a~l~C~~~~~~~~p~p-----~i~ 101 (167)
.+|.|.|.+.+. .+.+|+++.|.|.+.+. |.| .++
T Consensus 83 I~~v~~~DsG~Y~C~~~n~~g~~~~~~~~~~~~L~V~~~~~v~~~p~~~~v~~G~~v~L~C~~~~~---~~~~~~~~~v~ 159 (256)
T 1nqb_A 83 LSSLTSEDSAVYYCARYDYYGSSYFDYWGQGTTVTVSSDIELTQTPLSLPVSLGDQASISCRSSQS---IVHSNGNTYLE 159 (256)
T ss_dssp ECSCCGGGCEEEEEEECCTTSSSSCSEECCCEEEEECCCCCEEEECSEEEECTTCCEEEEEEESSC---CBCTTSCBCEE
T ss_pred ECcCChhhCEEEEEEEeeccCccceeEEcCceeeeecccccEEecCcEEEEecCCcEEEEeEecCc---ccccccceEEE
Confidence 179999986431 24579999999999853 543 899
Q ss_pred EEe--CCCeeeEE--ee----eecCCceEEEcc---CCeEEEeecCcCCCCcceEEEeeecC----cceEEEeeeC
Q psy12724 102 WIS--DQGEELFV--DM----TESTDGKYLVLP---SGELHIRDVGPEDGYKSYQCRTKHRL----TGETRLSATK 162 (167)
Q Consensus 102 W~k--~~~~~l~~--~~----~~~~~~r~~~~~---~g~L~I~~v~~~D~~G~Y~C~a~n~~----~~~~~l~~~~ 162 (167)
|+| ++ ..+.. .. .....+||.+.. .+.|.|.+++.+|+ |.|.|.|.|.. +..++|++.+
T Consensus 160 W~k~~~g-~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~Ds-G~Y~C~a~~~~~~~fg~gt~l~V~~ 233 (256)
T 1nqb_A 160 WYLQKPG-QSPKLLIYKVSNRFSGVPDRFSGSGSGTDFTLKISRVEAEDL-GVYYCFQGSHVPYTFGGGTKLEIKR 233 (256)
T ss_dssp EEEECTT-SCEEEEEETTTEECTTCCTTEEEEEETTEEEEEESSCCGGGC-EEEEEEECSSSSCEECCCEEEEECC
T ss_pred EEEECCC-CCcEEEEEEeCCCCCccCCcEEEEccCCEEEEEECCCChHHC-EEEEEEEccCCceEECCCEEEEEEC
Confidence 999 44 23210 00 001135665542 24799999999999 99999999843 4566777653
No 131
>3mj8_L Stimulatory hamster antibody HL4E10 FAB light CHA; hamster IGG, immune system; 2.94A {Cricetulus migratorius} PDB: 3mj9_L*
Probab=99.62 E-value=1e-14 Score=109.21 Aligned_cols=130 Identities=20% Similarity=0.294 Sum_probs=85.6
Q ss_pred eeeEEeEEEEEeCCcEEEEeecCCCCCCcceeeEEeeCC--Cce-ee-e--------cCCc----------eE-------
Q psy12724 13 YEAQVYDVFVIKGNAAVFKCNLPSFVSDHLDVVSWADTD--GGQ-YQ-I--------DNQD----------FV------- 63 (167)
Q Consensus 13 ~~~~~~~~~v~~G~~~~l~C~a~~~~~~~~~~i~W~k~~--~~~-~~-~--------~~~~----------~v------- 63 (167)
+...+ ++.+.+|+++.|.|.+.+.+. +.+.|+|.+ ... .. . ...| .+
T Consensus 4 v~~~~-~~~v~~G~~v~L~C~~~~~~~---~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~ 79 (213)
T 3mj8_L 4 LTQPP-LVSVALGQKATITCSGDKLSD---VYVHWYQQKAGQAPVLVIYEDNRRPSGIPDHFSGSNSGNMATLTISKAQA 79 (213)
T ss_dssp BBCCS-EEEEETTSCEEEEEECSSTTT---SCEEEEEECTTSCCEEEEBTTTBCCTTSCTTEEEEEETTEEEEEESSCCG
T ss_pred EEeCC-cEEEeCCCCEEEEEEcCCCCC---ceEEEEEECCCCCcEEEEEECCccCCCccCcEEEEecCCEEEEEECCCCh
Confidence 34455 889999999999999996654 479999832 111 10 0 0011 01
Q ss_pred -EEeeeEEEecCe-------------EE-------------------EeCCcEEEEeeeCCccCCcc-eeEEEEeCCCee
Q psy12724 64 -VSQSYTVNIMDE-------------HV-------------------LKGNSAVLKCHIPSFVADYV-AVESWISDQGEE 109 (167)
Q Consensus 64 -~~g~y~c~~~~~-------------~v-------------------~~G~~a~l~C~~~~~~~~p~-p~i~W~k~~~~~ 109 (167)
.+|.|.|.+.+. .| .+|+++.|.|.+.+. .|. +.++|+||+ ..
T Consensus 80 ~D~G~Y~C~~~~~~~~~~~~~~~~~l~V~~~~~~~P~i~~~~~~~~~~~g~~v~l~C~~~g~--~p~~~~v~W~k~g-~~ 156 (213)
T 3mj8_L 80 GDEADYYCQSWDGTNSAWVFGSGTKVTVLGQPNAAPSVTLFPPSSEELKTNQATLVCMINGF--YPADVAVTWEADG-TP 156 (213)
T ss_dssp GGCEEEEEEEEETTTTEEEEBCCEEEEEECSCCBCCEEEEECCCHHHHTTTEEEEEEEEEEE--BSSCCEEEEEETT-EE
T ss_pred hhCEEEEEEeccCCcceeEEcCceEEEEeCCCCCCCeEEccCCCcccccCCcEEEEEEeece--eCCCeEEEEEcCC-cc
Confidence 279999987320 11 149999999999753 233 489999997 55
Q ss_pred eEEeee----ecCCceEEEccCCeEEEeecCcCCCCcceEEEeeecC
Q psy12724 110 LFVDMT----ESTDGKYLVLPSGELHIRDVGPEDGYKSYQCRTKHRL 152 (167)
Q Consensus 110 l~~~~~----~~~~~r~~~~~~g~L~I~~v~~~D~~G~Y~C~a~n~~ 152 (167)
+..... ...++.|.+ .+.|.|.+++.+|+ |.|+|.|.|..
T Consensus 157 l~~~~~~~~~~~~~~~~~~--~s~L~i~~~~~~d~-G~Y~C~a~n~~ 200 (213)
T 3mj8_L 157 ITQGVKTTQPSKSDSKYMA--TSYLTMTADAWKSR-NTFICKVTHGG 200 (213)
T ss_dssp ECTTEEECCCEEETTEEEE--EEEEEEESHHHHSC-SCEEEEEEETT
T ss_pred cCCCcccCCcCccCCcEEE--EEEEEEeHHHcCCC-CEEEEEEEECC
Confidence 531100 001233433 35699999999999 99999999987
No 132
>3bkj_L WO2 IGG2A FAB fragment light chain kappa; abeta, FAB, WO2, alzheimer'S disease, immunotherapies, APP, immune system; 1.59A {Mus musculus} PDB: 3bkc_L 3bkm_L 2zuq_B* 1h3p_L
Probab=99.62 E-value=6.7e-16 Score=119.31 Aligned_cols=144 Identities=19% Similarity=0.271 Sum_probs=87.5
Q ss_pred eeeEEEeeec-eeeEEeEEEEEeCCcEEEEeecCCCCCC--cceeeEEeeCC-Cce---eee------c--CCc------
Q psy12724 3 FWPVAVISQY-YEAQVYDVFVIKGNAAVFKCNLPSFVSD--HLDVVSWADTD-GGQ---YQI------D--NQD------ 61 (167)
Q Consensus 3 ~~~~av~~~~-~~~~~~~~~v~~G~~~~l~C~a~~~~~~--~~~~i~W~k~~-~~~---~~~------~--~~~------ 61 (167)
+|+.++..+. +...+.++.+.+|+++.|.|.+.+.+.. ..+.|.|+|++ +.. +.. . ..|
T Consensus 26 l~~~~~~~~~~v~~~p~~~~v~~G~~v~L~C~~~~~~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~ 105 (252)
T 3bkj_L 26 FWIPGSSSDVLMTQTPLSLPVNLGEQASISCRSSQSIVHSNGHTYLEWYLQRPGQSPKLLIYQVSTRFSGVPDRFSGSGS 105 (252)
T ss_dssp --------CCCEEEECSEEEECTTSCEEEEEEESSCCBCTTSCBCEEEEEECTTSCCEEEEETTTEECTTCCTTEEEEEE
T ss_pred HhccccccccEEEeCCceEEEeCCCcEEEEEEcCCCccccCCCCcEEEEEECCCCCcEEEEEcCCcccCCcCCceEEEcc
Confidence 3444444443 4556888999999999999999887611 02579999864 211 100 0 011
Q ss_pred ----eE--------EEeeeEEEecCe-----------E---------E---------EeCCcEEEEeeeCCccCCcce-e
Q psy12724 62 ----FV--------VSQSYTVNIMDE-----------H---------V---------LKGNSAVLKCHIPSFVADYVA-V 99 (167)
Q Consensus 62 ----~v--------~~g~y~c~~~~~-----------~---------v---------~~G~~a~l~C~~~~~~~~p~p-~ 99 (167)
.+ .+|.|.|.+.+. . + .+|+++.|.|.+.+. .|.| .
T Consensus 106 ~~~~~L~I~~v~~~D~G~Y~C~~~~~~~~~~~~~~~l~V~~~~~~P~v~~~~~~~~~~~g~~v~L~C~~~g~--~p~~~~ 183 (252)
T 3bkj_L 106 GTDFTLRISRVEAEDLGVYYCFQASLVPLTFGAGTKLELKRADAAPTVSIFPPSSEQLTSGGASVVCFLNNF--YPKDIN 183 (252)
T ss_dssp TTEEEEEESSCCGGGCEEEEEEECSBSSCEECCCEEEEECCCCBCCEEEEECCCHHHHHHTEEEEEEEEEEE--BSSCCE
T ss_pred CCEEEEEECCCCcccCEEEEEEEEcCCccEECCCEEEEEeCCCcCcEEEEeCCChhhcCCCcEEEEEEEeeE--eCCCcE
Confidence 11 279999987431 0 1 147899999999753 2544 6
Q ss_pred EEEEeCCCeeeEEe-e-----eecCCceEEEccCCeEEEeecCcCCCCcceEEEeeecC
Q psy12724 100 ESWISDQGEELFVD-M-----TESTDGKYLVLPSGELHIRDVGPEDGYKSYQCRTKHRL 152 (167)
Q Consensus 100 i~W~k~~~~~l~~~-~-----~~~~~~r~~~~~~g~L~I~~v~~~D~~G~Y~C~a~n~~ 152 (167)
++|+||+ ..+... . ....++.|.. ...|.|.+++.+|+ |.|+|.|.|..
T Consensus 184 v~W~k~g-~~~~~~~~~~~~~~~~~~g~~~~--~s~L~i~~~~~~d~-g~Y~C~a~n~~ 238 (252)
T 3bkj_L 184 VKWKIDG-SERQNGVLNSWTDQDSKDSTYSM--SSTLTLTKDEYERH-NSYTCEATHKT 238 (252)
T ss_dssp EEEEETT-EEECSSEEEEECCCCTTTCCEEE--EEEEEEEHHHHHHC-CEEEEEEECTT
T ss_pred EEEEECC-eecCCCeeeecCcccCCCCCEEE--EEEEEEcchhccCC-CeEEEEEEeCC
Confidence 9999997 454211 0 0001122211 12599999999999 99999999986
No 133
>2edj_A Roundabout homolog 2; KIAA1568 protein, beta sandwich, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.61 E-value=3.6e-15 Score=99.87 Aligned_cols=83 Identities=20% Similarity=0.352 Sum_probs=66.0
Q ss_pred EEEecCeEEEeCCcEEEEeeeCCccCCcceeEEEEeCCCeeeEEeeeecCCceEEEccCCeEEEeecCcCCCCcceEEEe
Q psy12724 69 TVNIMDEHVLKGNSAVLKCHIPSFVADYVAVESWISDQGEELFVDMTESTDGKYLVLPSGELHIRDVGPEDGYKSYQCRT 148 (167)
Q Consensus 69 ~c~~~~~~v~~G~~a~l~C~~~~~~~~p~p~i~W~k~~~~~l~~~~~~~~~~r~~~~~~g~L~I~~v~~~D~~G~Y~C~a 148 (167)
...+.+..+.+|+++.|.|.+. +.|.|.++|+|++ ..+. ....++.+..++.|.|.+++.+|+ |.|+|.|
T Consensus 12 ~~~p~~~~v~~G~~~~l~C~~~---g~p~p~v~W~~~~-~~~~-----~~~~~~~~~~~~~L~i~~v~~~d~-G~Y~C~a 81 (100)
T 2edj_A 12 LQGPANQTLAVDGTALLKCKAT---GDPLPVISWLKEG-FTFP-----GRDPRATIQEQGTLQIKNLRISDT-GTYTCVA 81 (100)
T ss_dssp EECCCCEEEESSSEEEECCEEE---CSSCCEEEEEESS-SEES-----SSCSSCEECTTCCEEEESCCTTTC-CEEEEEE
T ss_pred EeCcCCEEEcCCCcEEEEEEEE---EcCCCEEEEEECC-EECC-----CCCCCEEEcCCCEEEEccCCcccC-EEEEEEE
Confidence 3345567889999999999997 4588999999997 4542 135677788889999999999999 9999999
Q ss_pred eecC---cceEEEeee
Q psy12724 149 KHRL---TGETRLSAT 161 (167)
Q Consensus 149 ~n~~---~~~~~l~~~ 161 (167)
.|.. +..+.|.+.
T Consensus 82 ~n~~g~~~~~~~l~V~ 97 (100)
T 2edj_A 82 TSSSGETSWSAVLDVT 97 (100)
T ss_dssp ECSSCCCBCCEEEEEE
T ss_pred EcCCCCEEEEEEEEEe
Confidence 9986 445555553
No 134
>3sob_L Antibody light chain; beta propeller, protein binding-immune system complex; 1.90A {Homo sapiens} PDB: 1pkq_A 3u1s_L*
Probab=99.61 E-value=3.5e-15 Score=113.15 Aligned_cols=131 Identities=20% Similarity=0.295 Sum_probs=88.1
Q ss_pred eeeEEeEEEEEeCCcEEEEeecCCCCCCcceeeEEeeCC-Cce---eee-c-------CCc----------eE-------
Q psy12724 13 YEAQVYDVFVIKGNAAVFKCNLPSFVSDHLDVVSWADTD-GGQ---YQI-D-------NQD----------FV------- 63 (167)
Q Consensus 13 ~~~~~~~~~v~~G~~~~l~C~a~~~~~~~~~~i~W~k~~-~~~---~~~-~-------~~~----------~v------- 63 (167)
+...+.++.+.+|+++.|.|.+.+.+. +.+.|+|++ +.. +.. + ..+ .+
T Consensus 27 v~~~p~~~~v~~G~~v~L~C~~~~~~~---~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~ 103 (237)
T 3sob_L 27 MTQSPSSLSASVGDRVTITCRASQDVS---TAVAWYQQKPGKAPKLLIYSASFLYSGVPSRFSGSGSGTDFTLTISSLQP 103 (237)
T ss_dssp EEEECSEEEEETTCCEEEEEEESSCCT---TCEEEEEECTTSCCEEEEETTTEECTTCCTTEEEEEETTEEEEEESSCCG
T ss_pred EEeCCCeEEEeCCCcEEEEEecCCCCC---ceEEEEEECCCCCCEEEEEeccccCCCCCCcEEEEcCCCEEEEEECCCCh
Confidence 556688899999999999999988753 479999843 111 000 0 011 01
Q ss_pred -EEeeeEEEecCe-----------EE------------------EeCCcEEEEeeeCCccCCc-ceeEEEEeCCCeeeEE
Q psy12724 64 -VSQSYTVNIMDE-----------HV------------------LKGNSAVLKCHIPSFVADY-VAVESWISDQGEELFV 112 (167)
Q Consensus 64 -~~g~y~c~~~~~-----------~v------------------~~G~~a~l~C~~~~~~~~p-~p~i~W~k~~~~~l~~ 112 (167)
.+|.|.|.+.+. .| .+|+++.|.|.+.+. .| .|.++|+||+ ..+..
T Consensus 104 ~D~G~Y~C~~~~~~~~~~~~~~~l~V~~~~~~p~v~~~~~~~~~~~g~~v~l~C~~~~~--~p~~~~v~W~k~g-~~~~~ 180 (237)
T 3sob_L 104 EDFATYYCQQSYTTPPTFGQGTKVEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNF--YPREAKVQWKVDN-ALQSG 180 (237)
T ss_dssp GGCEEEEEEECSSSSCEECCCEEEEEECCCBCCEEEEECCCHHHHHHTEEEEEEEEEEE--BSSCCEEEEEETT-EECCS
T ss_pred hhCeEEEEeeccCCceEEcCcEEEEEecCCCCCceEEeCCChhhccCCceEEEEEEccc--CCCceEEEEEECC-CCCCC
Confidence 279999998430 11 148899999999753 25 5899999997 45431
Q ss_pred e----e--eecCCceEEEccCCeEEEeecCcCCCCcceEEEeeecC
Q psy12724 113 D----M--TESTDGKYLVLPSGELHIRDVGPEDGYKSYQCRTKHRL 152 (167)
Q Consensus 113 ~----~--~~~~~~r~~~~~~g~L~I~~v~~~D~~G~Y~C~a~n~~ 152 (167)
. . ....++.|.+ ...|.|.++..+|+ |.|+|.|.|..
T Consensus 181 ~~~~~~~~~~~~~g~~~~--~s~L~i~~~~~~d~-g~Y~C~a~n~~ 223 (237)
T 3sob_L 181 NSQESVTEQDSKDSTYSL--SSTLTLSKADYEKH-KVYACEVTHQG 223 (237)
T ss_dssp SEEEEECCCCTTTCCEEE--EEEEEEEHHHHTTC-CEEEEEEECTT
T ss_pred ceeecccccccCCCcEEE--EEEEEEcHHHccCC-CcEEEEEeeCC
Confidence 0 0 0112233333 23699999999999 99999999987
No 135
>1f3r_B FV antibody fragment; IG-fold, immuno complex, antibody-antigen, beta-turn, immune system; HET: NLE; NMR {Rattus norvegicus} SCOP: b.1.1.1 b.1.1.1
Probab=99.61 E-value=1.1e-14 Score=113.08 Aligned_cols=142 Identities=16% Similarity=0.167 Sum_probs=91.9
Q ss_pred eEEeEEEEEeCCcEEEEeecCCCCCCcceeeEEeeCC-Cc---eeee-c-----------CCc------------eE---
Q psy12724 15 AQVYDVFVIKGNAAVFKCNLPSFVSDHLDVVSWADTD-GG---QYQI-D-----------NQD------------FV--- 63 (167)
Q Consensus 15 ~~~~~~~v~~G~~~~l~C~a~~~~~~~~~~i~W~k~~-~~---~~~~-~-----------~~~------------~v--- 63 (167)
.++..+.+.+|+++.|.|.+.+.+.+ .+.+.|+|++ +. .+.. + ..| .+
T Consensus 5 ~~p~~~~v~~G~~v~L~C~~~g~p~~-~~~v~W~k~~~g~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~~L~I~ 83 (257)
T 1f3r_B 5 LESGPGLVRPSETLSLTCTVSGFSLT-SFSVSWVRHPSGKGPEWMGRMWYDGYTAYNSALKSRLSISRDTSKNQVFLKMN 83 (257)
T ss_dssp EEECCSEECTTSEEEEEEEEESSCTT-TSCCEEEEEETTSCCEEEEEECSSSCEEECSSSSTTEEEEEETTTTEEEEEEE
T ss_pred ECCCCccccCCceEEEEEEEecccCC-CccEEEEEeCCCCCcEEEEEEecCCceeeCcccCCcEEEEEECCCCEEEEEEC
Confidence 45667789999999999999887522 2479999862 11 1100 0 011 11
Q ss_pred -----EEeeeEEEecCe-------------------------------------------------EEEeCCcEEEEeee
Q psy12724 64 -----VSQSYTVNIMDE-------------------------------------------------HVLKGNSAVLKCHI 89 (167)
Q Consensus 64 -----~~g~y~c~~~~~-------------------------------------------------~v~~G~~a~l~C~~ 89 (167)
.+|.|.|.+.+. .+.+|+++.|.|.+
T Consensus 84 ~v~~~DsG~Y~C~a~n~~g~~~~~~~~~~~~~~~~l~V~~~~~~~~~~~~~~~~~~~~~~~~p~~~~v~~G~~v~L~C~~ 163 (257)
T 1f3r_B 84 SLQTDDTGTYYCTRDLYGGYPLGFWYFDFWGPGTMVTVSSGGGGSGGGGSGGGGSDIKLTQSPSLLSASVGDRVTLSCKG 163 (257)
T ss_dssp SCCTTCCEEEEEEEESSSSCCSSCCCEEEECCCEEEEECSSCCSSCCSSSCCCCCEECSCEETSEECCCTTCCEEEEEEC
T ss_pred CCCcccCEEEEEEEcccccCccccccccccCCceEEEEEeCCccccccccCCCccceEEEccCCEEEEcCCCCEEEEEEE
Confidence 279999986431 12468999999999
Q ss_pred CCccCCcceeEEEEe--CCCeeeEE--eee----ecCCceEEEcc---CCeEEEeecCcCCCCcceEEEeeecC---cce
Q psy12724 90 PSFVADYVAVESWIS--DQGEELFV--DMT----ESTDGKYLVLP---SGELHIRDVGPEDGYKSYQCRTKHRL---TGE 155 (167)
Q Consensus 90 ~~~~~~p~p~i~W~k--~~~~~l~~--~~~----~~~~~r~~~~~---~g~L~I~~v~~~D~~G~Y~C~a~n~~---~~~ 155 (167)
.+ .|.|.++|+| ++. .+.. ... ....+||.+.. ...|.|.+++.+|+ |.|.|.|.|.. +..
T Consensus 164 ~~---~~~~~v~W~k~~~g~-~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~D~-G~Y~C~a~n~~~~~g~g 238 (257)
T 1f3r_B 164 SQ---NINNYLAWYQQKLGE-APKLLIYNTNSLQTGIPSRFSGSGSGTDYTLTISSLQPEDV-ATYFCYQYNNGYTFGAG 238 (257)
T ss_dssp SS---CCBTCEEEEEECTTS-CCEEEEETTTEECTTCCTTEEEEEEBTEEEEEECSCCGGGC-SEEEEEEESSSEEECCC
T ss_pred CC---cCCCcEEEEEECCCC-CcEEEEEEccCCCCCcCCCEEEecCCCEEEEEECCCChhhC-EEEEEEEeCCCCeECCC
Confidence 74 4777899999 442 2210 000 01135676543 23799999999999 99999999963 444
Q ss_pred EEEeeeC
Q psy12724 156 TRLSATK 162 (167)
Q Consensus 156 ~~l~~~~ 162 (167)
++|.+.+
T Consensus 239 t~l~V~~ 245 (257)
T 1f3r_B 239 TKLELKA 245 (257)
T ss_dssp CEECCSS
T ss_pred EEEEEeC
Confidence 5555544
No 136
>2pet_A Lutheran blood group glycoprotein; immunoglobulin superfamily., cell adhesion; 1.70A {Homo sapiens} PDB: 2pf6_A
Probab=99.61 E-value=2.7e-15 Score=113.13 Aligned_cols=128 Identities=15% Similarity=0.264 Sum_probs=85.6
Q ss_pred EEeEEEEEeCCcEEEEeecCCCCCCcceeeEEeeCCCc----eee--------------------------ecCCceE--
Q psy12724 16 QVYDVFVIKGNAAVFKCNLPSFVSDHLDVVSWADTDGG----QYQ--------------------------IDNQDFV-- 63 (167)
Q Consensus 16 ~~~~~~v~~G~~~~l~C~a~~~~~~~~~~i~W~k~~~~----~~~--------------------------~~~~~~v-- 63 (167)
.|+++.+.+|+++.|.|.+.+.+. .+.+.|.|++.. .+. .++.+.+
T Consensus 6 ~p~~~~v~~G~~v~L~C~~~~~~~--~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~L~i~~ 83 (231)
T 2pet_A 6 VPPLVEVMRGKSVILDCTPTGTHD--HYMLEWFLTDRSGARPRLASAEMQGSELQVTMHDTRGRSPPYQLDSQGRLVLAE 83 (231)
T ss_dssp CCSEEEEETTCCEEECCCCBSCCS--EEEEEEEEECTTCCCCEEEEEEEETTEEEEEECCCSCCSSCCEECTTCCEEESS
T ss_pred CCCcEEEEcCCCEEEecccCCCCC--ceEEEEEEeCCCceeEEEEeccccCCccccccccccccccccccCCCceEEEcc
Confidence 567899999999999999988764 357999986443 111 1111111
Q ss_pred ----EEeeeEEEecC-----------------------------eEEEeCCcE-EEEeee-CCccCCcceeEEEEeCCCe
Q psy12724 64 ----VSQSYTVNIMD-----------------------------EHVLKGNSA-VLKCHI-PSFVADYVAVESWISDQGE 108 (167)
Q Consensus 64 ----~~g~y~c~~~~-----------------------------~~v~~G~~a-~l~C~~-~~~~~~p~p~i~W~k~~~~ 108 (167)
.+|.|+|.+.+ ..+.+|+++ .|.|.+ . +.|.|.++|+|++ .
T Consensus 84 v~~~D~G~Y~C~~~~~~~~~~~~~~~l~V~~~p~~~~~~~~~~~~~~~~g~~~~~l~C~~~~---~~p~p~i~W~~~~-~ 159 (231)
T 2pet_A 84 AQVGDERDYVCVVRAGAAGTAEATARLNVFAKPEATEVSPNKGTLSVMEDSAQEIATCNSRN---GNPAPKITWYRNG-Q 159 (231)
T ss_dssp CCGGGCEEEEEEEECGGGCEEEEEEEEEEEBCCCCCEEEECCSSCCTTCCSEEEEEEEEEEE---EBSCCEEEEEETT-E
T ss_pred cCcccCceEEEEEEecCCCceEEEEEEEEEecCCCcEEecCCcceeecCCCceEEEEEEeEC---cccCCEEEEEECC-c
Confidence 27999998632 012368877 999999 5 4589999999997 4
Q ss_pred eeEEeeeecCCceEEEcc------C------CeEEEeecCcCCCCcceEEEeeecC
Q psy12724 109 ELFVDMTESTDGKYLVLP------S------GELHIRDVGPEDGYKSYQCRTKHRL 152 (167)
Q Consensus 109 ~l~~~~~~~~~~r~~~~~------~------g~L~I~~v~~~D~~G~Y~C~a~n~~ 152 (167)
.+.... ....++.+.. + +.|.|......|+ |.|+|.|.|..
T Consensus 160 ~~~~~~--~~~~~~~~~~~~~~~~~g~~~~~~~L~i~~~~~dd~-g~Y~C~a~n~~ 212 (231)
T 2pet_A 160 RLEVPV--EMNPEGYMTSRTVREASGLLSLTSTLYLRLRKDDRD-ASFHCAAHYSL 212 (231)
T ss_dssp ECCCCS--SCCSSEEEEEEEEECTTSCEEEEEEEEEECCGGGGG-CEEEEEEEEEC
T ss_pred cCcccc--ccccceeecceeEecCCCeEEEEEEEEEecchhhCC-ceEEEEEEcCC
Confidence 553210 0112443332 1 4688886666668 99999999953
No 137
>3gkz_A Anti-methamphetamine single chain FV; therapeutic antibody, MDMA, IGG, immune system; HET: B40; 1.90A {Mus musculus} PDB: 3gm0_A* 1rvf_L 3ab0_C 2a0l_C 3iy5_A
Probab=99.61 E-value=1.1e-14 Score=112.64 Aligned_cols=145 Identities=17% Similarity=0.274 Sum_probs=94.0
Q ss_pred eEEeEEEEEeCCcEEEEeecCCCCCCcceeeEEeeCC-Cce--ee----ecC---------Cc------------eE---
Q psy12724 15 AQVYDVFVIKGNAAVFKCNLPSFVSDHLDVVSWADTD-GGQ--YQ----IDN---------QD------------FV--- 63 (167)
Q Consensus 15 ~~~~~~~v~~G~~~~l~C~a~~~~~~~~~~i~W~k~~-~~~--~~----~~~---------~~------------~v--- 63 (167)
.++.++.|.+|+++.|.|.+.+.+.+ .+.+.|+|.+ +.. +. .++ .| .+
T Consensus 13 ~~p~~~~v~~G~~v~L~C~~~~~~~~-~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~I~ 91 (257)
T 3gkz_A 13 QESGPSLVKPSQTLSLTCSVTGDSVT-SGYWSWIRQFPGNKLDYMGYISYRGSTYYNPSLKSRISITRDTSKNQVYLQLK 91 (257)
T ss_dssp EEECCSEECTTCCEEEEEEEEESCCS-SCEEEEEEECTTSCEEEEEEEETTCCEEECTTTTTTEEEEEEGGGTEEEEEEC
T ss_pred ECCCCeEEcCCCcEEEEEEEEccccc-ceEEEEEEECCCCCcEEEEEEecCCcEEecccccccEEEEEecCCceEEEEEC
Confidence 46677889999999999999875422 2579999843 111 11 000 01 11
Q ss_pred -----EEeeeEEEecC-------------------------------------------eEEEeCCcEEEEeeeCCccCC
Q psy12724 64 -----VSQSYTVNIMD-------------------------------------------EHVLKGNSAVLKCHIPSFVAD 95 (167)
Q Consensus 64 -----~~g~y~c~~~~-------------------------------------------~~v~~G~~a~l~C~~~~~~~~ 95 (167)
.+|.|.|.+.+ ..+.+|+++.|.|.+.+ .
T Consensus 92 ~v~~~DsG~Y~C~~~n~~~~~~~~~~~~~~l~V~~~~~~~~~~~~~~~~~~~~~~~p~~~~v~~G~~v~L~C~~~~---~ 168 (257)
T 3gkz_A 92 SVSSEDTATYYCSYFDSDDYAMEYWGQGTSVTVSGGGGSGGGGSGGGGSQIVLTQSPAIMSASPGEKVTLTCSASS---S 168 (257)
T ss_dssp SCCGGGCEEEEEEEECTTCTTCEEECCCEEEEEC---------CTTCCCCCCEECSCSEEEECTTCCEEEEEEESS---C
T ss_pred CCChhhCEEEEEEEecCCCcceeEEcCCEEEeecCchhhcccccCCCccceEEEcCCceEEEeCCCcEEEEEEEcc---C
Confidence 27999998733 12457999999999985 3
Q ss_pred cce-eEEEEeCC-CeeeEEee------eecCCceEEEccC---CeEEEeecCcCCCCcceEEEeeecC----cceEEEee
Q psy12724 96 YVA-VESWISDQ-GEELFVDM------TESTDGKYLVLPS---GELHIRDVGPEDGYKSYQCRTKHRL----TGETRLSA 160 (167)
Q Consensus 96 p~p-~i~W~k~~-~~~l~~~~------~~~~~~r~~~~~~---g~L~I~~v~~~D~~G~Y~C~a~n~~----~~~~~l~~ 160 (167)
|.| .+.|+|++ +..+.... .....+|+.+..+ ..|.|.+++.+|+ |.|.|.|.|.. +.-++|.+
T Consensus 169 ~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~D~-G~Y~C~~~~~~~~~fg~gt~l~v 247 (257)
T 3gkz_A 169 VSSSHLYWYQQKPGSSPKLWIYSTSNLASGVPARFSGSGSGTSYSLTISSMEAEDA-ASYFCHQWSSFPFTFGSGTKLEI 247 (257)
T ss_dssp CCGGGEEEEEECTTSCCEEEEETTTEECTTCCTTEEEEEETTEEEEEESSCCGGGC-EEEEEEECSSSSCEECCCEEEEE
T ss_pred ccceEEEEEEECCCCCcEEEEEEccccCCCcCCCEEEecCCCEEEEEECCCChHHC-EEEEEEEccCCceEEcCCEEEEE
Confidence 666 89999842 11211000 0011256655432 2599999999999 99999999843 66778887
Q ss_pred eCCe
Q psy12724 161 TKGR 164 (167)
Q Consensus 161 ~~~~ 164 (167)
.+..
T Consensus 248 ~~~~ 251 (257)
T 3gkz_A 248 KRAP 251 (257)
T ss_dssp CCC-
T ss_pred EeCC
Confidence 6653
No 138
>2zg1_A Sialic acid-binding IG-like lectin 5; siglec-5 inhibitory receptor, two-domain structure, V-SET, C2-SET, IG-like domain, 6'-sialyllactose complex; HET: SIA; 2.70A {Homo sapiens} PDB: 2zg3_A* 2zg2_A
Probab=99.61 E-value=3.1e-15 Score=111.92 Aligned_cols=127 Identities=19% Similarity=0.219 Sum_probs=86.9
Q ss_pred eEEeEEEEEeCCcEEEEeecCCCC----CCcceeeEEeeCCCc-----eeeecC----------Cc------------eE
Q psy12724 15 AQVYDVFVIKGNAAVFKCNLPSFV----SDHLDVVSWADTDGG-----QYQIDN----------QD------------FV 63 (167)
Q Consensus 15 ~~~~~~~v~~G~~~~l~C~a~~~~----~~~~~~i~W~k~~~~-----~~~~~~----------~~------------~v 63 (167)
..|.++.+.+|+++.|.|.+.+.. ....+.+.|+|++.. .+..+. .| .+
T Consensus 5 ~~p~~v~v~~G~~v~L~C~~~~~~~~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~sL 84 (214)
T 2zg1_A 5 QVQKSVTVQEGLCVLVPCSFSYPWRSWYSSPPLYVYWFRDGEIPYYAEVVATNNPDRRVKPETQGRFRLLGDVQKKNCSL 84 (214)
T ss_dssp ECCSEEEEETTCCEEECCEEECCCCCCSCCCCEEEEEEETTCCGGGCCBSEESCTTSCBCTTTTTTEEECSCGGGTBCCE
T ss_pred eCCcEEEEecCccEEEeeeeecCCcccCCCCceEEEEEecCCCCcccceEecCCcccccCccccCceEEeccCCCCeEEE
Confidence 347789999999999999987431 012367999998542 111000 01 11
Q ss_pred --------EEeeeEEEecCe-----------------------------EEEeCCcEEEEeeeCCc-cCCcceeEEEEeC
Q psy12724 64 --------VSQSYTVNIMDE-----------------------------HVLKGNSAVLKCHIPSF-VADYVAVESWISD 105 (167)
Q Consensus 64 --------~~g~y~c~~~~~-----------------------------~v~~G~~a~l~C~~~~~-~~~p~p~i~W~k~ 105 (167)
.+|.|.|.+.+. .+.+|+++.|.|.+.+. .+.|.|.++|+|+
T Consensus 85 ~I~~v~~~D~G~Y~C~~~~~~~~~~~~~~~~~~l~V~~~~~~p~i~~~~~~~~G~~v~L~C~~~~~~~~~p~p~v~W~~~ 164 (214)
T 2zg1_A 85 SIGDARMEDTGSYFFRVERGRDVKYSYQQNKLNLEVTALIEKPDIHFLEPLESGRPTRLSCSLPGSCEAGPPLTFSWTGN 164 (214)
T ss_dssp EECSCCGGGCEEEEEEEEETTTEEEECCSSCEEEEEECCCCCCEEC--CCCCTTCCEEEEEECTTCCSCSSCCEEEEESS
T ss_pred EEccCCHhhCceEEEEEEcCCCceeeecCCceEEEEecCCCCCceecCccccCCCeEEEEEEeccCCCCCCCceEEEeCC
Confidence 279999976320 11359999999999753 2358899999999
Q ss_pred CCeeeEEeeeecCCceEEEccCCeEEEeecCcCCCCcceEEEeeecC
Q psy12724 106 QGEELFVDMTESTDGKYLVLPSGELHIRDVGPEDGYKSYQCRTKHRL 152 (167)
Q Consensus 106 ~~~~l~~~~~~~~~~r~~~~~~g~L~I~~v~~~D~~G~Y~C~a~n~~ 152 (167)
+. .+. ..+. ..++.|.|.++..+|+ |.|+|.|.|..
T Consensus 165 ~~-~~~-------~~~~--~~~~~L~i~~~~~~~~-g~Y~C~a~n~~ 200 (214)
T 2zg1_A 165 AL-SPL-------DPET--TRSSELTLTPRPEDHG-TNLTCQMKRQG 200 (214)
T ss_dssp TT-SSS-------CSSC--CCSSEEEECCCTTCCS-CEEEEEEECC-
T ss_pred CC-ccC-------CCCc--eeEEEEEEecccHHcC-cEEEEEEEeCC
Confidence 74 321 1222 4567899999999998 99999999974
No 139
>3u83_A Poliovirus receptor-related protein 1; nectin-1, hinge region plasiticity, cell adhesion; HET: PG6; 2.50A {Homo sapiens} PDB: 3alp_A* 3u82_B 4fmf_A* 3sku_E* 2l7j_A
Probab=99.60 E-value=3.3e-15 Score=118.53 Aligned_cols=129 Identities=19% Similarity=0.236 Sum_probs=89.4
Q ss_pred EEeEEEEEeC---CcEEEEee-cCCCCCCcceeeEEeeCCCcee-ee-----cCCce---E---------EEeeeEEEec
Q psy12724 16 QVYDVFVIKG---NAAVFKCN-LPSFVSDHLDVVSWADTDGGQY-QI-----DNQDF---V---------VSQSYTVNIM 73 (167)
Q Consensus 16 ~~~~~~v~~G---~~~~l~C~-a~~~~~~~~~~i~W~k~~~~~~-~~-----~~~~~---v---------~~g~y~c~~~ 73 (167)
.+.+..+.+| +++.|.|. +.+.|. +.++|+|+..... .. ++... . ..|.|+|.+.
T Consensus 138 ~~~~~~~~~g~~~~~~~l~C~~~~~~p~---~~i~W~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~ 214 (331)
T 3u83_A 138 TQAVLRAKKGQDDKVLVATCTSANGKPP---SVVSWETRLKGEAEYQEIRNPNGTVTVISRYRLVPSREAHQQSLACIVN 214 (331)
T ss_dssp CSSCEEECTTCCCCEEEEEEEEEEEBSC---CEEEEEESSCCEEEEEEEECTTSCEEEEEEEEECCCGGGTTCEEEEEEE
T ss_pred CCCceeecCCCccceEEEEEEecCCcCC---ceEEEEcCCCCccccceeECCCCcEEEEEEEEEEeccccCCCEEEEEEe
Confidence 3445667888 78999998 666664 4799999632211 11 11111 1 1599999874
Q ss_pred C--------------------------eEEEeCCcEEEEeeeCCccCCccee-EEEEeCCCeeeEEeeeecCCceEEEcc
Q psy12724 74 D--------------------------EHVLKGNSAVLKCHIPSFVADYVAV-ESWISDQGEELFVDMTESTDGKYLVLP 126 (167)
Q Consensus 74 ~--------------------------~~v~~G~~a~l~C~~~~~~~~p~p~-i~W~k~~~~~l~~~~~~~~~~r~~~~~ 126 (167)
+ ..+.+|+++.|.|.+. ++|.|. ++|+|+++ .+. .. . ...
T Consensus 215 n~~~~~~~~~~l~V~~~P~~~~~~~~~~~~~~g~~~~l~C~~~---g~p~p~~i~W~~~~~-~~~------~~--~-~~~ 281 (331)
T 3u83_A 215 YHMDRFKESLTLNVQYEPEVTIEGFDGNWYLQRMDVKLTCKAD---ANPPATEYHWTTLNG-SLP------KG--V-EAQ 281 (331)
T ss_dssp ETTEEEEEEEECCEEEEEEEEEECCCSCCBTTCCCEEEEEEEE---EESCCCEEEEEETTB-SCC------TT--E-EEE
T ss_pred cCCCcceeeEEEEEecCCeEEEecCCCceEeCCCeEEEEEeCc---CCCCCCEEEEEECCC-ccc------cc--c-eec
Confidence 3 1234699999999997 458887 99999973 442 12 2 235
Q ss_pred CCeEEEe-ecCcCCCCcceEEEeeecC---cceEEEeee
Q psy12724 127 SGELHIR-DVGPEDGYKSYQCRTKHRL---TGETRLSAT 161 (167)
Q Consensus 127 ~g~L~I~-~v~~~D~~G~Y~C~a~n~~---~~~~~l~~~ 161 (167)
++.|.|. +++.+|+ |.|+|.|.|.. +..+.|.+.
T Consensus 282 ~~~L~i~~~v~~~d~-G~Y~C~a~N~~G~~~~~~~l~V~ 319 (331)
T 3u83_A 282 NRTLFFKGPINYSLA-GTYICEATNPIGTRSGQVEVNIT 319 (331)
T ss_dssp TTEEEECSCCCGGGC-EEEEEEEEETTEEEEEEEEECCB
T ss_pred CcEEEEeCCCccccC-eEEEEEEEeccccceEEEEEEEe
Confidence 7899999 9999998 99999999987 344555554
No 140
>2y23_A Myomesin; structural protein, sarcomere, M-BAND, immunoglobulin- like; 2.50A {Homo sapiens}
Probab=99.60 E-value=8.3e-15 Score=114.99 Aligned_cols=121 Identities=14% Similarity=0.174 Sum_probs=86.2
Q ss_pred EEEEEeCCcEEEEeecCCCCCCcceeeEEeeCCCceeeec--------CCc-eE--------EEeeeEEEecC-------
Q psy12724 19 DVFVIKGNAAVFKCNLPSFVSDHLDVVSWADTDGGQYQID--------NQD-FV--------VSQSYTVNIMD------- 74 (167)
Q Consensus 19 ~~~v~~G~~~~l~C~a~~~~~~~~~~i~W~k~~~~~~~~~--------~~~-~v--------~~g~y~c~~~~------- 74 (167)
.+.|.+|+++.|.|......+ .+.+.|+|++. .+..+ +.. .+ ..|.|+|.+.+
T Consensus 10 ~~~v~eg~~v~l~~~~~~~~p--~~~v~W~k~~~-~i~~~~~~~~~~~~~~~~L~I~~~~~~D~G~Y~C~~~n~~g~~~s 86 (312)
T 2y23_A 10 VVNVDDDGVISLNFECDKMTP--KSEFSWSKDYV-STEDSPRLEVESKGNKTKMTFKDLGMDDLGIYSCDVTDTDGIASS 86 (312)
T ss_dssp EEEECTTCCEEEEEECSSCCT--TCCEEEEETTE-ECTTCTTEEEEEETTEEEEEESSCCGGGCEEEEEEESSSCCCCEE
T ss_pred eEEEecCCeEEEEEEEeCCCC--CcEEEEEECCE-ECCCCCCEEEEEeCCEEEEEECcCCccCCEEEEEEEEeCCCcEEE
Confidence 467889999999999873222 35899999853 33211 111 11 27999998743
Q ss_pred ------------------------------eEEEeCCcEEEEeeeCCccCCcceeEEEEeCCCeeeEEeeeecCCceEEE
Q psy12724 75 ------------------------------EHVLKGNSAVLKCHIPSFVADYVAVESWISDQGEELFVDMTESTDGKYLV 124 (167)
Q Consensus 75 ------------------------------~~v~~G~~a~l~C~~~~~~~~p~p~i~W~k~~~~~l~~~~~~~~~~r~~~ 124 (167)
..+.+|+++.|.|.+.+ +.|.|.++|+|++ ..+. ...++.+
T Consensus 87 ~~l~v~~~~~~~~~~~~~~~p~~~~~~~~~~~v~~G~~v~l~C~~~~--~~p~~~v~W~~~~-~~i~------~~~~~~~ 157 (312)
T 2y23_A 87 YLIDEEELKRLLALSHEHKFPTVPVKSELAVEILEKGQVRFWMQAEK--LSGNAKVNYIFNE-KEIF------EGPKYKM 157 (312)
T ss_dssp EEECHHHHHHHHHHHHHHHSCBCCEEEEEEEEECSSSCEEEEEEESC--CCSSCEEEEEETT-EEEC------SSSSCEE
T ss_pred EEEEEeeeeeeecccccCCCCccccccCCceEEeeCCCEEEEEEEEe--CCCCCEEEEEECC-EECe------eCCcEEE
Confidence 24567999999999973 3488999999997 5553 3455555
Q ss_pred ccC---Ce--EEEeecCcCCCCcceEEEeeecC
Q psy12724 125 LPS---GE--LHIRDVGPEDGYKSYQCRTKHRL 152 (167)
Q Consensus 125 ~~~---g~--L~I~~v~~~D~~G~Y~C~a~n~~ 152 (167)
..+ +. |.|.+++.+|+ |.|+|.|.|..
T Consensus 158 ~~~~~~~~~~L~i~~~~~~d~-G~Y~C~~~~~~ 189 (312)
T 2y23_A 158 HIDRNTGIIEMFMEKLQDEDE-GTYTFQLQDGK 189 (312)
T ss_dssp EEETTTTEEEEEESCCCGGGC-EEEEEEEESSS
T ss_pred EEccCCCEEEEEEccCCcccC-EeEEEEEEeCC
Confidence 432 32 99999999999 99999998753
No 141
>3v2a_R Vascular endothelial growth factor receptor 2; IG-homology domain, vegfr-2, growth factor receptor, VEGF LI hormone-signaling protein complex, angiogenesis; 3.20A {Homo sapiens} PDB: 3v6b_R
Probab=99.60 E-value=5.7e-17 Score=142.10 Aligned_cols=133 Identities=18% Similarity=0.224 Sum_probs=0.0
Q ss_pred eeeEEeEEEEEeCCcEEEEeecCCCCCCcceeeEEeeCCCceeee-------------------------cCC-----ce
Q psy12724 13 YEAQVYDVFVIKGNAAVFKCNLPSFVSDHLDVVSWADTDGGQYQI-------------------------DNQ-----DF 62 (167)
Q Consensus 13 ~~~~~~~~~v~~G~~~~l~C~a~~~~~~~~~~i~W~k~~~~~~~~-------------------------~~~-----~~ 62 (167)
+...+. ..+.+|+++.|.|.+.+.+. +.+.|+|++...... ++. ..
T Consensus 553 i~~~p~-~~~~~G~~v~l~C~~~~~p~---~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~ 628 (772)
T 3v2a_R 553 ITLQPD-MQPTEQESVSLWCTADRSTF---ENLTWYKLGPQPLPIHVGELPTPVCKNLDTLWKLNATMFSNSTNDILIME 628 (772)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred eeccCC-cccccCCceEEEEeccCCCC---CCcEEEEcCCcccccccCcccccccccccceeeccceeeecCCCceEEEE
Confidence 333443 45889999999999998764 479999986532210 111 00
Q ss_pred ------EEEeeeEEEecC-----------------------------eEEEeCCcEEEEeeeCCccCCcceeEEEEeCCC
Q psy12724 63 ------VVSQSYTVNIMD-----------------------------EHVLKGNSAVLKCHIPSFVADYVAVESWISDQG 107 (167)
Q Consensus 63 ------v~~g~y~c~~~~-----------------------------~~v~~G~~a~l~C~~~~~~~~p~p~i~W~k~~~ 107 (167)
-.+|.|+|.+.+ ..+.+|+++.|.|.+. |+|.|.++|+||+
T Consensus 629 i~~~~~~d~G~Y~C~a~n~~~~~~~s~~~~l~v~~~~~P~~~~~~~~~~v~~g~~~~l~C~~~---g~P~p~v~W~k~g- 704 (772)
T 3v2a_R 629 LKNASLQDQGDYVCLAQDRKTKKRHCVVRQLTVLERVAPTITGNLENQTTSIGESIEVSCTAS---GNPPPQIMWFKDN- 704 (772)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred ECCCCccCCcEEEEEEEeCCCCeEEEEEEeecccccCCCEeecCCCceEEeCCCCEEEEEEeC---ccCCCeEEEEECC-
Confidence 137999998744 2346799999999998 4599999999997
Q ss_pred eeeEEeeeecCCceEEEcc-CCeEEEeecCcCCCCcceEEEeeecC---cceEEEee
Q psy12724 108 EELFVDMTESTDGKYLVLP-SGELHIRDVGPEDGYKSYQCRTKHRL---TGETRLSA 160 (167)
Q Consensus 108 ~~l~~~~~~~~~~r~~~~~-~g~L~I~~v~~~D~~G~Y~C~a~n~~---~~~~~l~~ 160 (167)
..+.. +.++.+.. ++.|.|.+++.+|+ |.|+|.|.|.. ...+.|.+
T Consensus 705 ~~l~~------~~~~~~~~~~~~L~I~~v~~~D~-G~Y~C~a~N~~G~~~~~~~l~V 754 (772)
T 3v2a_R 705 ETLVE------DSGIVLKDGNRNLTIRRVRKEDE-GLYTCQACSVLGCAKVEAFFII 754 (772)
T ss_dssp ---------------------------------------------------------
T ss_pred eECcC------CCCeEEcCCCcEEEECcCCHHHC-EEEEEEEEeCCcceeEEEEEEE
Confidence 45532 33454443 67899999999999 99999999977 33455555
No 142
>1dr9_A B7-1 (CD80), T lymphocyte activation antigen; IG superfamily, immune system; HET: NAG; 3.00A {Homo sapiens} SCOP: b.1.1.1 b.1.1.3 PDB: 1i8l_A*
Probab=99.60 E-value=3.2e-15 Score=111.15 Aligned_cols=125 Identities=17% Similarity=0.162 Sum_probs=82.5
Q ss_pred eEEEEEeCCcEEEEeecCCCC-CCcceeeEEeeCCCceee--------------------ecCCceE--------EEeee
Q psy12724 18 YDVFVIKGNAAVFKCNLPSFV-SDHLDVVSWADTDGGQYQ--------------------IDNQDFV--------VSQSY 68 (167)
Q Consensus 18 ~~~~v~~G~~~~l~C~a~~~~-~~~~~~i~W~k~~~~~~~--------------------~~~~~~v--------~~g~y 68 (167)
..+.|.+|+++.|.|.+.+.. +.+.+.+.|.|++. .+. ..+...+ .+|.|
T Consensus 2 ~~v~v~~G~~v~L~C~~~~~~~~~~~~~~~W~~~~~-~i~~~~~~~~~~~~~~~~r~~~~~~~~~~L~I~~v~~~D~G~Y 80 (201)
T 1dr9_A 2 IHVTKEVKEVATLSCGHNVSVEELAQTRIYWQKEKK-MVLTMMSGDMNIWPEYKNRTIFDITNNLSIVILALRPSDEGTY 80 (201)
T ss_dssp CEEEEETTSCEEECCSCCCCTTHHHHCEEEEEETTE-EEEEEETTEEEECHHHHTTEEEESTTTTEEEECSCCGGGCEEE
T ss_pred ceEEEEeCCCEEEecccCCCcccccccEEEEEeCCc-EEEEEeCCceeecCcccceeEEccCCCcEEEEecccchhCeEE
Confidence 357899999999999997542 11235799999854 331 0011111 27999
Q ss_pred EEEecCe-----------E----E--------------EeCCcEEEEeeeCCccCCcceeEEEEeCCCeeeEEeeeecCC
Q psy12724 69 TVNIMDE-----------H----V--------------LKGNSAVLKCHIPSFVADYVAVESWISDQGEELFVDMTESTD 119 (167)
Q Consensus 69 ~c~~~~~-----------~----v--------------~~G~~a~l~C~~~~~~~~p~p~i~W~k~~~~~l~~~~~~~~~ 119 (167)
+|.+.+. . | ..|+.+.|.|.+.+ +.|.|.++|+||+ ..+.. ..
T Consensus 81 ~C~~~~~~g~~~~~~~~~~~~l~V~~~~~~p~~~~~~~~~g~~~~l~C~~~~--g~P~p~i~W~k~g-~~l~~-----~~ 152 (201)
T 1dr9_A 81 ECVVLKYEKDAFKREHLAEVTLSVKADFPTPSISDFEIPTSNIRRIICSTSG--GFPEPHLSWLENG-EELNA-----IN 152 (201)
T ss_dssp EEEEEECCTTSCEEEEEEEEEEEEECCCCCCEEEEEECSSTTEEEEEEEEEE--ESSCEEEEEEESS-CEECC-----SE
T ss_pred EEEEEcCCCCccccccccEEEEEEcCCCCCCceEeccCCCCCeEEEEEecCC--ccCCCEEEEEECC-EECcc-----cc
Confidence 9987430 0 0 24778999999952 3599999999997 45531 22
Q ss_pred ceEEEccC-CeE---EEeecCcCCCCcceEEEeeecC
Q psy12724 120 GKYLVLPS-GEL---HIRDVGPEDGYKSYQCRTKHRL 152 (167)
Q Consensus 120 ~r~~~~~~-g~L---~I~~v~~~D~~G~Y~C~a~n~~ 152 (167)
.++....+ +.+ .+..++.+|+ |.|+|.|.|..
T Consensus 153 ~~~~~~~~~~~~~~~~~~~v~~~d~-g~Y~C~a~n~~ 188 (201)
T 1dr9_A 153 TTVSQDPETELYAVSSKLDFNMTTN-HSFMCLIKYGH 188 (201)
T ss_dssp EEEEECTTTCCEEEEEEEEEETTSC-EEEEEEEEETT
T ss_pred ceEEecCCCcEEEEEEEEEEEecCC-CEEEEEEecCc
Confidence 34444444 332 2356678998 99999999987
No 143
>1u2h_A APEG-1, aortic preferentially expressed protein 1; structural genomics, IG-fold I-SET, RGD motif, homophilic adhesion, arterial smooth muscle cells; 0.96A {Homo sapiens}
Probab=99.60 E-value=5.5e-15 Score=98.54 Aligned_cols=84 Identities=20% Similarity=0.438 Sum_probs=64.0
Q ss_pred eEEEecCeEEEeCCcEEEEeeeCCccCCcceeEEEEeCCCeeeEEeeeecCCceEEEccCC---eEEEeecCcCCCCcce
Q psy12724 68 YTVNIMDEHVLKGNSAVLKCHIPSFVADYVAVESWISDQGEELFVDMTESTDGKYLVLPSG---ELHIRDVGPEDGYKSY 144 (167)
Q Consensus 68 y~c~~~~~~v~~G~~a~l~C~~~~~~~~p~p~i~W~k~~~~~l~~~~~~~~~~r~~~~~~g---~L~I~~v~~~D~~G~Y 144 (167)
+...+.+..+.+|+++.|.|.+.+ .|.|.++|+|++ ..+.. ...++.+..++ .|.|.+++.+|+ |.|
T Consensus 8 ~~~~~~~~~v~~G~~v~l~C~~~g---~p~p~v~W~k~~-~~~~~-----~~~~~~~~~~~~~~~L~i~~~~~~D~-G~Y 77 (99)
T 1u2h_A 8 FKVSLMDQSVREGQDVIMSIRVQG---EPKPVVSWLRNR-QPVRP-----DQRRFAEEAEGGLCRLRILAAERGDA-GFY 77 (99)
T ss_dssp EEECCCCEEEETTCCEEEEEEEEE---ESCCEEEEEETT-EECCC-----BTTEEEEECGGGEEEEEESSCCGGGC-EEE
T ss_pred EEEcCCceEecCCCEEEEEEEEEE---cCCCEEEEEECC-EECCC-----CCCEEEEECCCCEEEEEEccCCcCCC-EEE
Confidence 444456678899999999999974 588999999997 45532 34556655554 699999999999 999
Q ss_pred EEEeeecC---cceEEEeee
Q psy12724 145 QCRTKHRL---TGETRLSAT 161 (167)
Q Consensus 145 ~C~a~n~~---~~~~~l~~~ 161 (167)
+|.|.|.. +..+.|.+.
T Consensus 78 ~C~a~N~~g~~~~~~~l~V~ 97 (99)
T 1u2h_A 78 TCKAVNEYGARQCEARLEVR 97 (99)
T ss_dssp EEEEEETTEEEEEEEEEEEE
T ss_pred EEEEEECCCceeEEEEEEEE
Confidence 99999987 334455553
No 144
>3dmk_A DOWN syndrome cell adhesion molecule (dscam) ISOF 1.30.30, N-terminal eight IG domains...; immunoglobulin domain; HET: NAG NDG; 4.19A {Drosophila melanogaster}
Probab=99.60 E-value=1.1e-14 Score=129.06 Aligned_cols=126 Identities=17% Similarity=0.324 Sum_probs=97.3
Q ss_pred ceeeEEeEEEEEeCCcEEEEeecCCCCCCcceeeEEeeCCCceeeec------------CCc--eE--------EEeeeE
Q psy12724 12 YYEAQVYDVFVIKGNAAVFKCNLPSFVSDHLDVVSWADTDGGQYQID------------NQD--FV--------VSQSYT 69 (167)
Q Consensus 12 ~~~~~~~~~~v~~G~~~~l~C~a~~~~~~~~~~i~W~k~~~~~~~~~------------~~~--~v--------~~g~y~ 69 (167)
.+...+.+..+.+|+++.|.|.+.+.|.+ .+.|.+++. .+..+ +.. .+ ..|.|+
T Consensus 431 ~i~~~~~~~~v~~G~~v~L~C~~~g~p~p---~v~W~~~g~-~l~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~ 506 (816)
T 3dmk_A 431 VIRQAFQEETMEPGPSVFLKCVAGGNPTP---EISWELDGK-KIANNDRYQVGQYVTVNGDVVSYLNITSVHANDGGLYK 506 (816)
T ss_dssp EEEEECCCEEECSSSCEEEEEEEECSSCC---EEEEEETTE-ECCSCTTEEEEEEECTTSCEEEEEEESSCCTTTCEEEE
T ss_pred ceEecCcceEEcCCCCEEEEEEEecCCCC---EEEEEECCE-ECCCCCCcccccEEecCCCcEEEEEEeeccccCCEEEE
Confidence 35566677889999999999999987754 799999853 33221 110 01 169999
Q ss_pred EEecC------------------------eEEEeCCcEEEEeeeCCccCCcceeEEEEeCCCeeeEEeeeecCCceEEEc
Q psy12724 70 VNIMD------------------------EHVLKGNSAVLKCHIPSFVADYVAVESWISDQGEELFVDMTESTDGKYLVL 125 (167)
Q Consensus 70 c~~~~------------------------~~v~~G~~a~l~C~~~~~~~~p~p~i~W~k~~~~~l~~~~~~~~~~r~~~~ 125 (167)
|.+.+ ..+.+|+++.|.|.+.+ .|.|.++|+|++ ..+. ...++.+.
T Consensus 507 C~a~n~~g~~~~~~~l~V~~~p~~~~~~~~~v~~G~~v~l~C~~~g---~p~~~i~W~k~~-~~l~------~~~~~~~~ 576 (816)
T 3dmk_A 507 CIAKSKVGVAEHSAKLNVYGLPYIRQMEKKAIVAGETLIVTCPVAG---YPIDSIVWERDN-RALP------INRKQKVF 576 (816)
T ss_dssp EEEEETTEEEEEEEEEEECSSCEECCCCCEEEETTCCEEEECCEEC---SSEEEEEEEETT-EESC------CSTTEEEC
T ss_pred EEEEECCCeEEEEEEEEEecCCeeEccCCeEEecCCeEEEEEEecC---CCCCEEEEEECC-eEcc------cCCceEEe
Confidence 98743 34568999999999974 588999999997 4542 35677778
Q ss_pred cCCeEEEeecC-cCCCCcceEEEeeecC
Q psy12724 126 PSGELHIRDVG-PEDGYKSYQCRTKHRL 152 (167)
Q Consensus 126 ~~g~L~I~~v~-~~D~~G~Y~C~a~n~~ 152 (167)
.+|.|.|.++. .+|+ |.|+|.|.|..
T Consensus 577 ~~~~l~i~~v~~~~d~-G~Y~C~a~n~~ 603 (816)
T 3dmk_A 577 PNGTLIIENVERNSDQ-ATYTCVAKNQE 603 (816)
T ss_dssp TTSEEEESSCCHHHHC-EEEEEEEEESS
T ss_pred cCCeEEEEecCccccC-EEEEEEEEECC
Confidence 89999999998 6999 99999999986
No 145
>3omz_A Human vdelta1 gamma delta T cell receptor delta1A; immunoglobulin fold, immune surveillance of cell stress PROT A/B, MIC-A/B binding, epithelium; 3.04A {Homo sapiens}
Probab=99.60 E-value=1.1e-14 Score=112.88 Aligned_cols=146 Identities=20% Similarity=0.267 Sum_probs=86.0
Q ss_pred eceeeEEeEEEEEeCCcEEEEeecCCCCCCcceeeEEeeCC---Cce-ee-ec----------C---Cc-----------
Q psy12724 11 QYYEAQVYDVFVIKGNAAVFKCNLPSFVSDHLDVVSWADTD---GGQ-YQ-ID----------N---QD----------- 61 (167)
Q Consensus 11 ~~~~~~~~~~~v~~G~~~~l~C~a~~~~~~~~~~i~W~k~~---~~~-~~-~~----------~---~~----------- 61 (167)
+.++..+.++.+.+|+++.|.|.+.+.+. +.+.|+|.+ +.. +. .+ . .+
T Consensus 3 ~~v~~~p~~~~v~~G~~v~L~C~~~~~~~---~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~ 79 (259)
T 3omz_A 3 SNLEGRTKSVIRQTGSSAEITCDLAEGST---GYIHWYLHQEGKAPQRLLYYDSYTSSVVLESGISPGKYDTYGSTRKNL 79 (259)
T ss_dssp --------CEEEETTCCEEEECCC--------CEEEEEEECTTSCCEEEEEEETTTCCEEECTTCCBTTEEEECC--CCC
T ss_pred cccccCCceeEecCCCcEEEEEEEccCCC---cEEEEEEECCCCCcEEEEEEecCcCccccCCCCCcceeEeecCCCCeE
Confidence 45677888999999999999999988764 479999831 111 10 01 0 00
Q ss_pred eE--------EEeeeEEEecC---------------------------------------------eEEEeCCcEEEEee
Q psy12724 62 FV--------VSQSYTVNIMD---------------------------------------------EHVLKGNSAVLKCH 88 (167)
Q Consensus 62 ~v--------~~g~y~c~~~~---------------------------------------------~~v~~G~~a~l~C~ 88 (167)
.+ .+|.|.|.+.+ ..+.+|++|.|.|.
T Consensus 80 ~L~I~~v~~~DsG~Y~C~~~~~~~~~~~~~~~~~l~V~~~~~~~~~~~~~~~~~~~~~~v~~~p~~~~v~~G~~v~L~C~ 159 (259)
T 3omz_A 80 RMILRNLIENDSGVYYCATWDQNYYKKLFGSGTSLVVTDKQGSADDAKKDAAKKDGAQKVTQAQSSVSMPVRKAVTLNCL 159 (259)
T ss_dssp EEEESSCCGGGCEEEEEEEECTTSSCEEECCCEEEEEEC------------------CEEECCCCCEEEETTCCEEECCE
T ss_pred EEEECCCCcccCEEEEEEEeeCCccccEECCCCEEEEecCCCCccccccccccccCCeeeEEeCCEEEEcCCCCEEEEEE
Confidence 11 17999997632 23467999999998
Q ss_pred eCCccCCcceeEEEEeCCC-eeeEEeee------ecCCceEEEcc-----CCeEEEeecCcCCCCcceEEEeeecC----
Q psy12724 89 IPSFVADYVAVESWISDQG-EELFVDMT------ESTDGKYLVLP-----SGELHIRDVGPEDGYKSYQCRTKHRL---- 152 (167)
Q Consensus 89 ~~~~~~~p~p~i~W~k~~~-~~l~~~~~------~~~~~r~~~~~-----~g~L~I~~v~~~D~~G~Y~C~a~n~~---- 152 (167)
+.+ ..|.+.+.|+|++. ..+..... ....+|+.+.. +..|.|.+++.+|+ |.|.|.+.+..
T Consensus 160 ~~~--~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~I~~v~~~Ds-G~Y~C~~~~~~~~~~ 236 (259)
T 3omz_A 160 YET--SWWSYYIFWYKRLPSKEMIFLIRQGSDEQNAKSGRYSVNFKKAAKSVALTISALQLEDS-AKYFCALGESLTRAD 236 (259)
T ss_dssp EEC--CCSSCEEEEEEECTTCCEEEEEEEETTSCCCEETTEEECCBGGGTBCCEEESSCCGGGC-SEEEEEEESCSSTTC
T ss_pred CCC--ccCCceEEEeeeCCCCCcEEEEEECCcCCcccCCeEEEEEcCcCCEEEEEECCCChhHC-EEEEEEEeCccCCCC
Confidence 863 12678999998531 11110000 01135777653 23599999999999 99999997531
Q ss_pred ----cceEEEeeeC
Q psy12724 153 ----TGETRLSATK 162 (167)
Q Consensus 153 ----~~~~~l~~~~ 162 (167)
..-|+|.+.+
T Consensus 237 ~~~fg~GT~l~v~~ 250 (259)
T 3omz_A 237 KLIFGKGTRVTVEP 250 (259)
T ss_dssp CCEECCCEEEEEEC
T ss_pred ceEECCCCEEEEee
Confidence 4455666644
No 146
>1z7z_I Intercellular adhesion molecule-1; ICAM-1,kilifi,CD54,human coxsackievirus A21, cryo-electron microscopy,virus-receptor complex, icosahedral virus; HET: NAG NDG; 8.00A {Homo sapiens} SCOP: b.1.1.3 b.1.1.3 b.1.1.4 b.1.1.4 b.1.1.4
Probab=99.60 E-value=9e-16 Score=127.13 Aligned_cols=123 Identities=13% Similarity=0.142 Sum_probs=88.0
Q ss_pred eeeEEeEEEEEeCCcEEEEeecCCCCCCcceee-----EEeeCCCceeeecCCce--E-----EEeeeEEEecC------
Q psy12724 13 YEAQVYDVFVIKGNAAVFKCNLPSFVSDHLDVV-----SWADTDGGQYQIDNQDF--V-----VSQSYTVNIMD------ 74 (167)
Q Consensus 13 ~~~~~~~~~v~~G~~~~l~C~a~~~~~~~~~~i-----~W~k~~~~~~~~~~~~~--v-----~~g~y~c~~~~------ 74 (167)
+.++|++..|.+|+++.|.|.+.+ +.+ .+ .|.|++.. +....... + ..| |+|.+.+
T Consensus 2 i~~~P~~~~v~~G~~v~L~C~~~g-p~p---~~~~~~~~w~k~~~~-~~~~~~~~l~i~~v~~d~g-Y~C~a~~~~~~~~ 75 (450)
T 1z7z_I 2 TSVSPSKVILPRGGSVLVTCSTSC-DQP---MLLGIETPLPKKELL-LPGNNRKVYELSNVQEDSQ-PMCYSNCPDGQST 75 (450)
T ss_dssp CEEESSEEEEETTEEEEEEEECCS-SCC---CEEEECSSSCEEECC-SSTTTEEEEEEEEECSCBC-CEEEEEETTEEEE
T ss_pred cccCCCceEEecCCcEEEEEEccC-CCc---ccccccceeeecceE-ecCCCceEEEEEecccCCe-eEEEEeCCCCcce
Confidence 467889999999999999999998 543 56 89988431 11101010 1 256 9997621
Q ss_pred --------------------eEEEeCCcEEEEeeeCCccCCcce---eEEEEeCCCeeeEEeeeecCCceEEEccCCeEE
Q psy12724 75 --------------------EHVLKGNSAVLKCHIPSFVADYVA---VESWISDQGEELFVDMTESTDGKYLVLPSGELH 131 (167)
Q Consensus 75 --------------------~~v~~G~~a~l~C~~~~~~~~p~p---~i~W~k~~~~~l~~~~~~~~~~r~~~~~~g~L~ 131 (167)
..+.+|+++.|.|.+.+ .|.| .++|+||+ ..+... .+.....++.|.
T Consensus 76 ~~~~l~V~~~P~~~~~~~~~~~v~~G~~v~L~C~~~g---~~~~~~~~v~W~k~g-~~l~~~------~~~~~~~~~~L~ 145 (450)
T 1z7z_I 76 AKTFLTVYWTPERVELAPLPSWQPVGKNLTLRCQVEG---GAPRANLTVVLLRGE-KELKRE------PAVGEPAEVTTT 145 (450)
T ss_dssp EECEEEEEBCCSEEEECCCCSEECTTSEEEEEEEEEC---CBCGGGEEEEEEETT-EEEEEE------ECCTTTEEEEEE
T ss_pred eEEEEEEEeCCCcceecCCCceEeeCCeEEEEEEecC---CCCCcCcEEEEeeCC-EEeecc------cccccccceEEE
Confidence 34568999999999985 3666 89999997 566432 111112245899
Q ss_pred EeecCcCCCCcceEEEeeecC
Q psy12724 132 IRDVGPEDGYKSYQCRTKHRL 152 (167)
Q Consensus 132 I~~v~~~D~~G~Y~C~a~n~~ 152 (167)
|.+++.+|+ |.|+|.|.|..
T Consensus 146 i~~~~~~d~-G~Y~C~a~n~~ 165 (450)
T 1z7z_I 146 VLVRRDHHG-ANFSCRTELDL 165 (450)
T ss_dssp EECCSSCSS-CEEEEEEEEEC
T ss_pred EEeeccccC-ceEEEEEEccc
Confidence 999999999 99999999985
No 147
>2c1o_A IGK-C protein; FAB fragment, enantioselective, finrozole, immune system, antibody, ENA11His antibody, immunoglobulin domain; 2.75A {Mus musculus}
Probab=99.60 E-value=4.5e-15 Score=114.32 Aligned_cols=137 Identities=18% Similarity=0.229 Sum_probs=89.8
Q ss_pred eeceeeEEeEEEEEeCCcEEEEeecCCCCCC--cceeeEEeeCC-Cceee---------ec--CCc----------eE--
Q psy12724 10 SQYYEAQVYDVFVIKGNAAVFKCNLPSFVSD--HLDVVSWADTD-GGQYQ---------ID--NQD----------FV-- 63 (167)
Q Consensus 10 ~~~~~~~~~~~~v~~G~~~~l~C~a~~~~~~--~~~~i~W~k~~-~~~~~---------~~--~~~----------~v-- 63 (167)
.+.+...+.++.+.+|+++.|.|.+.+.+.. ..+.+.|+|++ +..+. .. ..| .+
T Consensus 38 ~~~~~~~p~~~~v~~G~~v~L~C~~~~~~~~~~~~~~v~W~k~~~g~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I 117 (254)
T 2c1o_A 38 ELVMTQSPLTLSVTIGQPASISCKSSQSLLYSNGKTYLNWLLQRPGQSPKRLIYLVSKLDSGDPDRFTGSGSGTDFTLKI 117 (254)
T ss_dssp CCCEEEECSEEEECTTSCEEEEEEESSCCBCSSSCBCEEEEEECTTSCCEEEEETTTEECTTCCTTEEEEEETTEEEEEE
T ss_pred ceeEEeCCceEEecCCCcEEEEeeccCcccccCCCCceEEEEeCCCCCceEEEEeccccCCCccceEEEecCCCEEEEEE
Confidence 4456677889999999999999999887620 01479999853 32110 00 011 11
Q ss_pred ------EEeeeEEEecCe----------------------EE-------EeCCcEEEEeeeCCccCCcc-eeEEEEeCCC
Q psy12724 64 ------VSQSYTVNIMDE----------------------HV-------LKGNSAVLKCHIPSFVADYV-AVESWISDQG 107 (167)
Q Consensus 64 ------~~g~y~c~~~~~----------------------~v-------~~G~~a~l~C~~~~~~~~p~-p~i~W~k~~~ 107 (167)
.+|.|.|.+.+. .+ ..|+++.|.|.+.+. .|. +.++|+||+
T Consensus 118 ~~v~~~D~G~Y~C~a~n~~~~~~~~~~~l~V~~~~~~P~v~~~~~~~~~~~g~~v~l~C~~~g~--~p~~~~v~W~k~g- 194 (254)
T 2c1o_A 118 SRVEAEDLGIYYCVQGSHFPPTFGAGTKLELKRADAAPTVSIFPPSSEQLTSGGASVVCFLNNF--YPKDINVKWKIDG- 194 (254)
T ss_dssp SSCCGGGCSEEEEEECSSSSCEEBCCEEEEECCCCBCCEEEEECCCHHHHHTTEEEEEEEEEEE--BSSCCEEEEEESS-
T ss_pred CcCCcccCEEEEEEEEcCcceEecCCEEEEECCCCCCCeeEeecCChhhccCCcEEEEEEEecc--cCCCcEEEEEECC-
Confidence 169999987431 01 137899999999753 243 468999997
Q ss_pred eeeEEe-e-----eecCCceEEEccCCeEEEeecCcCCCCcceEEEeeecC
Q psy12724 108 EELFVD-M-----TESTDGKYLVLPSGELHIRDVGPEDGYKSYQCRTKHRL 152 (167)
Q Consensus 108 ~~l~~~-~-----~~~~~~r~~~~~~g~L~I~~v~~~D~~G~Y~C~a~n~~ 152 (167)
..+... . ....++.|.. .+.|.|.+++.+|+ |.|+|.|.|..
T Consensus 195 ~~l~~~~~~~~~~~~~~~g~~~~--~~~L~i~~~~~~d~-G~Y~C~a~n~~ 242 (254)
T 2c1o_A 195 SERQNGVLNSWTDQDSKDSTYSM--SSTLTLTKDEYERH-NSYTCEATHKT 242 (254)
T ss_dssp SEECTTEEEEECCCCTTTCCEEE--EEEEEEEHHHHHTC-CEEEEEEECTT
T ss_pred CcccCcceeccccccCCCCcEEE--EEEEEeccccccCC-CeEEEEEEcCC
Confidence 454311 0 0011223322 24799999999999 99999999986
No 148
>3r06_A Anti-mouse CD3epsilon antibody 2C11 FAB light CHA; anti-CD3epsilon, T-cell receptor, signalling, IMMU; 2.50A {Cricetulus migratorius} PDB: 3r08_L 3ld8_B 3ldb_B*
Probab=99.59 E-value=5.4e-15 Score=110.68 Aligned_cols=132 Identities=17% Similarity=0.259 Sum_probs=86.4
Q ss_pred eeeEEeEEEEEeCCcEEEEeecCCCCCCcceeeEEeeCC---Cce-eee-c-------CCc----------eE-------
Q psy12724 13 YEAQVYDVFVIKGNAAVFKCNLPSFVSDHLDVVSWADTD---GGQ-YQI-D-------NQD----------FV------- 63 (167)
Q Consensus 13 ~~~~~~~~~v~~G~~~~l~C~a~~~~~~~~~~i~W~k~~---~~~-~~~-~-------~~~----------~v------- 63 (167)
+...+.++.+.+|+++.|.|.+.+.+. +.+.|+|.+ ... +.. + ..| .+
T Consensus 4 v~~~p~~~~v~~G~~v~L~C~~~~~~~---~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~ 80 (213)
T 3r06_A 4 MTQSPSSLPASLGDRVTINCQASQDIS---NYLNWYQQKPGKAPKLLIYYTNKLADGVPSRFSGSGSGRDSSFTISSLES 80 (213)
T ss_dssp EEEECSEEEECTTCCEEEEEEESSCCT---TCEEEEEECTTSCCEEEEETTTEECTTCCTTEEEEEETTEEEEEESSCCG
T ss_pred eEeCCCEEEecCCCcEEEEEEeCCCcC---ceEEEEEECCCCCcEEEEEEcCcCCCCCCCcEEEeccCCEEEEEECCCCc
Confidence 455678899999999999999998853 479999842 111 000 0 011 11
Q ss_pred -EEeeeEEEecCe-----------EE------------------EeCCcEEEEeeeCCccCCcceeEEEEeCCCeeeEEe
Q psy12724 64 -VSQSYTVNIMDE-----------HV------------------LKGNSAVLKCHIPSFVADYVAVESWISDQGEELFVD 113 (167)
Q Consensus 64 -~~g~y~c~~~~~-----------~v------------------~~G~~a~l~C~~~~~~~~p~p~i~W~k~~~~~l~~~ 113 (167)
.+|.|.|.+.+. .| ..|+++.|.|.+.+. ..|.+.++|+||+ ..+.+.
T Consensus 81 ~D~G~Y~C~~~~~~~~~~~~~~~l~V~~~~~~p~v~~~~~~~~~~~~~~v~l~C~~~g~-~p~~~~v~W~k~g-~~l~~~ 158 (213)
T 3r06_A 81 EDIGSYYCQQYYNYPWTFGPGTKLEIKRADAKPTVSIFPPSSEQLGTGSATLVCFVNNF-YPKDINVKWKVDG-SEKRDG 158 (213)
T ss_dssp GGCSEEEEEECSSSSCEECCCEEEEECCCCBCCEEEEECCCHHHHTTTEEEEEEEEEEE-BSSCEEEEEEETT-EEECTT
T ss_pred ccCEEEEEecccCCceEEcCCceEEEeccCCCceeeeeCCCceecCCCCcEEEEEEeee-cCCceEEEEEECC-cccCCc
Confidence 279999998431 11 147789999999754 1124589999997 555310
Q ss_pred ---e---eecCCceEEEccCCeEEEeecCcCCCCcceEEEeeecC
Q psy12724 114 ---M---TESTDGKYLVLPSGELHIRDVGPEDGYKSYQCRTKHRL 152 (167)
Q Consensus 114 ---~---~~~~~~r~~~~~~g~L~I~~v~~~D~~G~Y~C~a~n~~ 152 (167)
. ....++.|.+. ..|.|.....+|+ |.|+|.|.|..
T Consensus 159 ~~~~~~~~~~~~g~~~~~--s~l~i~~~~~~d~-g~YtC~v~n~~ 200 (213)
T 3r06_A 159 VLQSVTDQDSKDSTYSLS--STLSLTKADYERH-NLYTCEVTHKT 200 (213)
T ss_dssp EEEEECCCCTTTCCEEEE--EEEEEEHHHHHTC-CEEEEEEEETT
T ss_pred eEeccCceeCCCCcEEEE--EEEEeCHHHhccC-CeEEEEEEecc
Confidence 0 00112223221 3688999999998 99999999986
No 149
>2ec8_A MAST/stem cell growth factor receptor; glycoprotein, receptor tyrosine kinase, growth factor cytoki dimerization, transferase; HET: NAG; 3.00A {Homo sapiens} PDB: 2e9w_A*
Probab=99.59 E-value=8.2e-15 Score=123.83 Aligned_cols=129 Identities=18% Similarity=0.224 Sum_probs=93.5
Q ss_pred eEEeEEEEEeCCcEEEEeecCCCCCCcceeeEEeeCCCceeeecCCceE--------EEeeeEEEecC------------
Q psy12724 15 AQVYDVFVIKGNAAVFKCNLPSFVSDHLDVVSWADTDGGQYQIDNQDFV--------VSQSYTVNIMD------------ 74 (167)
Q Consensus 15 ~~~~~~~v~~G~~~~l~C~a~~~~~~~~~~i~W~k~~~~~~~~~~~~~v--------~~g~y~c~~~~------------ 74 (167)
..+.+..+.+|+++.|.|.+.+ .+.|+|++...-.......+ ..|.|+|.+.+
T Consensus 41 ~~~~~~~v~~G~~v~l~C~~~~-------~v~W~~~~~~~~~~~~~~~L~I~~~~~~D~G~Y~C~a~ng~~~~~~l~V~~ 113 (524)
T 2ec8_A 41 PGKSDLIVRVGDEIRLLCTDPG-------FVKWTFEILDETNENKQNEWITEKAEATNTGKYTCTNKHGLSNSIYVFVRD 113 (524)
T ss_dssp SCCSEEECCTTSCEEEEEECTT-------EEEEEEESSSCCEEECSSEEEESSCCSTTCEEEEEEETTSCEEEEEEECCC
T ss_pred CCCceEEEeCCCeEEEEEeCCc-------eEEEcCCCccccccCccceEEEcccchhhCEEEEEeecCCcceEEEEEECC
Confidence 4556788999999999999986 49999987632111111111 27999998733
Q ss_pred ----------eEEEeCCcEEEEeeeCCccCCcceeEEEEeCCCeeeEEeeeecCCceEEEccCCeEEEeecCcCCCCc-c
Q psy12724 75 ----------EHVLKGNSAVLKCHIPSFVADYVAVESWISDQGEELFVDMTESTDGKYLVLPSGELHIRDVGPEDGYK-S 143 (167)
Q Consensus 75 ----------~~v~~G~~a~l~C~~~~~~~~p~p~i~W~k~~~~~l~~~~~~~~~~r~~~~~~g~L~I~~v~~~D~~G-~ 143 (167)
..+.+|+++.|.|.+.+ .|.|.++|+|.++..+. .+.++.+..++.|.|.+++.+|+ | .
T Consensus 114 p~~~~~~~~~~~v~~G~~v~l~C~~~~---~~~~~v~W~~~~g~~l~------~~~~~~~~~~~~L~i~~~~~~d~-G~~ 183 (524)
T 2ec8_A 114 PAKLFLVDRSLYGKEDNDTLVRCPLTD---PEVTNYSLKGCQGKPLP------KDLRFIPDPKAGIMIKSVKRAYH-RLC 183 (524)
T ss_dssp SSCSBCCCCCCCEETTSCEEECCCBSC---CCCSCEEEECSSSCCCC------SSCEEEEETTTEEEEESCCGGGT-TCE
T ss_pred CCcccccccceEEEcCCeEEEECcCCC---CccceEEEEccCCcCcC------CCCceeECCCccEEEeccchhhC-Cce
Confidence 34578999999999974 35689999984445552 36678888889999999999999 9 9
Q ss_pred eEEEeeecC----cceEEEee
Q psy12724 144 YQCRTKHRL----TGETRLSA 160 (167)
Q Consensus 144 Y~C~a~n~~----~~~~~l~~ 160 (167)
|+|.|.|.. +..+.|.+
T Consensus 184 Y~C~a~n~~~~~~s~~~~l~V 204 (524)
T 2ec8_A 184 LHCSVDQEGKSVLSEKFILKV 204 (524)
T ss_dssp EEEEEC----CCCCCCEECCE
T ss_pred EEEEEEECCceEEEEEEEEEE
Confidence 999999875 22455554
No 150
>3qp3_A Titin; I-SET IG-like, sarcomere, M-BAND, transferase; 2.00A {Homo sapiens}
Probab=99.59 E-value=7.2e-15 Score=98.75 Aligned_cols=85 Identities=19% Similarity=0.226 Sum_probs=65.7
Q ss_pred eeEEEecCeEEEeCCcEEEEeeeCCccCCcceeEEEEeCCCeeeEEeeeecCCceEEEccCC---eEEEeecCcCCCCcc
Q psy12724 67 SYTVNIMDEHVLKGNSAVLKCHIPSFVADYVAVESWISDQGEELFVDMTESTDGKYLVLPSG---ELHIRDVGPEDGYKS 143 (167)
Q Consensus 67 ~y~c~~~~~~v~~G~~a~l~C~~~~~~~~p~p~i~W~k~~~~~l~~~~~~~~~~r~~~~~~g---~L~I~~v~~~D~~G~ 143 (167)
.+...+.+..+.+|+++.|.|.+.+ .|.|.++|+|++ ..+. ...++.+..++ .|.|.+++.+|+ |.
T Consensus 10 ~~~~~~~~~~v~~G~~v~l~C~~~g---~p~p~i~W~k~~-~~~~------~~~~~~~~~~~~~~~L~i~~~~~~D~-G~ 78 (103)
T 3qp3_A 10 RITLRMRSHRVPCGQNTRFILNVQS---KPTAEVKWYHNG-VELQ------ESSKIHYTNTSGVLTLEILDCHTDDS-GT 78 (103)
T ss_dssp EEEECCCCEEEETTCCEEEEEEEEE---ESCCEEEEEETT-EECC------CCSSEEEEEETTEEEEEECSCCGGGC-EE
T ss_pred EEEeCCcceEEeCCCeEEEEEEEEe---cCCCEEEEEECC-EECC------CCCCEEEEECCCEEEEEEcCCCcccC-EE
Confidence 3455566788999999999999974 599999999997 5553 24566655433 699999999999 99
Q ss_pred eEEEeeecC---cceEEEeeeC
Q psy12724 144 YQCRTKHRL---TGETRLSATK 162 (167)
Q Consensus 144 Y~C~a~n~~---~~~~~l~~~~ 162 (167)
|+|.|.|.. +..+.|.+.+
T Consensus 79 Y~C~a~N~~G~~~~~~~l~V~~ 100 (103)
T 3qp3_A 79 YRAVCTNYKGEASDYATLDVTG 100 (103)
T ss_dssp EEEEEEETTEEEEEEEEEEEEC
T ss_pred EEEEEEeCCCcEEEEEEEEEEC
Confidence 999999987 4455666654
No 151
>1q0x_L FAB 9B1, light chain; anti-morphine antibody, FAB fragment, immune system; HET: PG4; 1.60A {Mus musculus} SCOP: b.1.1.1 b.1.1.2 PDB: 1q0y_L* 1ngp_L* 1ngq_L 3ks0_L* 1gig_L 2vir_A 2vis_A* 2vit_A 1sm3_L 4a6y_L 1ind_L* 1ine_L* 1yuh_L* 2zpk_L 3rhw_K* 3ri5_K* 3ria_K* 3rif_K* 1mfe_L* 1mfb_L* ...
Probab=99.59 E-value=2.9e-15 Score=112.31 Aligned_cols=130 Identities=18% Similarity=0.291 Sum_probs=84.3
Q ss_pred EeEEEEEeCCcEEEEeecCCCCCCcceeeEEeeCC-Ccee---e-------ec-CCc----------eE--------EEe
Q psy12724 17 VYDVFVIKGNAAVFKCNLPSFVSDHLDVVSWADTD-GGQY---Q-------ID-NQD----------FV--------VSQ 66 (167)
Q Consensus 17 ~~~~~v~~G~~~~l~C~a~~~~~~~~~~i~W~k~~-~~~~---~-------~~-~~~----------~v--------~~g 66 (167)
|.++.+.+|+++.|.|.+.+.+.+.-+.+.|+|++ +..+ . .. ..| .+ .+|
T Consensus 7 p~~~~v~~G~~v~L~C~~~~~~~~~~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~D~G 86 (212)
T 1q0x_L 7 ESALTTSPGETVTLTCRSSTGAVTTSNYANWVQEKPDHLFTGLIGGTNNRAPGVPARFSGSLIGDKAALTITGAQTEDEA 86 (212)
T ss_dssp CSEEEECTTCCEEEEEEESSSCCCGGGCCEEEEEETTTEEEEEEETTTEECTTCCTTEEEEEETTEEEEEESSCCGGGCE
T ss_pred CCeEeecCCCCEEEEEEecccccCCCCeEEEEEeCCCCCceEEEEcCcccCCcccccEEEEeeCCEEEEEECCCCccCCE
Confidence 88899999999999999988763112469999864 2221 0 00 011 11 279
Q ss_pred eeEEEecCe-----------EE-------------------EeCCcEEEEeeeCCccCCcce-eEEEEeCCCeeeEEee-
Q psy12724 67 SYTVNIMDE-----------HV-------------------LKGNSAVLKCHIPSFVADYVA-VESWISDQGEELFVDM- 114 (167)
Q Consensus 67 ~y~c~~~~~-----------~v-------------------~~G~~a~l~C~~~~~~~~p~p-~i~W~k~~~~~l~~~~- 114 (167)
.|.|.+.+. .| ..|+++.|.|.+.+. .|.| .++|+||+ ..+....
T Consensus 87 ~Y~C~~~~~~~~~~~~~~~l~V~~~~~~~P~v~~~~~~~~~~~g~~v~L~C~~~g~--~p~~~~v~W~k~g-~~l~~~~~ 163 (212)
T 1q0x_L 87 IYFCALWSNNKLVFGGGTKLTVLGQPKSSPTVTLFPPSSEELSTAKATLVCTITDF--YPGVVTVDWKVDG-TPVTAGME 163 (212)
T ss_dssp EEEEEEECSSCEEECCCEEEEECCSCCBCCEEEEECCCHHHHTTTEEEEEEEEEEE--BSSCCEEEEEETT-EEECTTEE
T ss_pred EEEEEEecCchhhcCCCeEEEEecCCCCCCeeEEeCCCHHHccCCcEEEEEEEEEE--eCCCeEEEEEECC-EeCCCCee
Confidence 999987430 01 148899999999753 2443 89999997 5552110
Q ss_pred ----eecCCceEEEccCCeEEEeecCcCCCCcceEEEeeecC
Q psy12724 115 ----TESTDGKYLVLPSGELHIRDVGPEDGYKSYQCRTKHRL 152 (167)
Q Consensus 115 ----~~~~~~r~~~~~~g~L~I~~v~~~D~~G~Y~C~a~n~~ 152 (167)
....++.|.. ...|.|.++..+|+ |.|+|.|.|..
T Consensus 164 ~~~~~~~~~g~~~~--~s~L~i~~~~~~d~-g~Y~C~a~n~~ 202 (212)
T 1q0x_L 164 TTQPSKQSNNKYMA--SSYLTLTARAWERH-SSYSCQVTHEG 202 (212)
T ss_dssp ECCCEECTTSCEEE--EEEEEEEHHHHTTC-CEEEEEEEETT
T ss_pred cCCceeCCCCCEEE--EEEEEEcHHHccCC-CcEEEEEEeCC
Confidence 0001111211 13599999999998 99999999986
No 152
>4fom_A Poliovirus receptor-related protein 3; immunoglobulin-like domain, IG domain, cell adhesion; HET: NAG BMA MAN FUC; 3.93A {Homo sapiens}
Probab=99.59 E-value=5.6e-16 Score=122.24 Aligned_cols=116 Identities=14% Similarity=0.184 Sum_probs=79.4
Q ss_pred EEEeCCcEEEEeecC-CCCCCcceeeEEeeCCCceeee-----cCCce----E--------EEeeeEEEecC--------
Q psy12724 21 FVIKGNAAVFKCNLP-SFVSDHLDVVSWADTDGGQYQI-----DNQDF----V--------VSQSYTVNIMD-------- 74 (167)
Q Consensus 21 ~v~~G~~~~l~C~a~-~~~~~~~~~i~W~k~~~~~~~~-----~~~~~----v--------~~g~y~c~~~~-------- 74 (167)
.+..|+++.|.|.+. +.|. +.++|+|++...... +.... + ..|.|+|.+.+
T Consensus 125 ~~~~~~~~~l~C~~~~g~P~---~~i~W~~~~~~~~~~~~~~~~~~~~~~s~l~i~~~~~~d~g~Y~C~a~n~~~~~~~~ 201 (308)
T 4fom_A 125 IDGGNETVAAICIAATGKPV---AHIDWEGDLGEMESTTTSFPNETATIISQYKLFPTRFARGRRITCVVKHPALEKDIR 201 (308)
T ss_dssp CTTCSCEEEEEEEEEEEBSC---CEEEECCCSSBCCEEEEECTTSCEEEEEEEEECCCGGGTTCEEEEEEECTTCSSCEE
T ss_pred EEcCCceEEEEEEecCCcCC---ceEEEEECCcccccccceeeeecccccccceEEeeeecCCccEEEEEEccCCCCceE
Confidence 345678999999864 4554 589999987643221 11111 1 15899998743
Q ss_pred --------------------eEEEeCCcEEEEeeeCCccCCcce-eEEEEeCCCeeeEEeeeecCCceEEEccCCeEEEe
Q psy12724 75 --------------------EHVLKGNSAVLKCHIPSFVADYVA-VESWISDQGEELFVDMTESTDGKYLVLPSGELHIR 133 (167)
Q Consensus 75 --------------------~~v~~G~~a~l~C~~~~~~~~p~p-~i~W~k~~~~~l~~~~~~~~~~r~~~~~~g~L~I~ 133 (167)
..+..|+++.|.|.+. |+|.| .++|+|+++ .+. .+ .....+..|.|+
T Consensus 202 ~~~~l~V~~~P~~~~~~~~~~~~~~g~~v~l~C~~~---g~P~p~~v~W~k~~~-~~~-------~~-~~~~~~~~l~i~ 269 (308)
T 4fom_A 202 YSFILDIQYAPEVSVTGYDGNWFVGRKGVNLKCNAD---ANPPPFKSVWSRLDG-QWP-------DG-LLASDNTLHFVH 269 (308)
T ss_dssp EEEECCCCEEEEECCBCCCSCEETTCCSCEEECCEE---EESCEEEEECCBSSS-CCC-------SS-CBCSTTEEECCS
T ss_pred EeEEEEEecCCeeEEcccceeeeeccccEEEEEEEe---cCCCCcEEEEEECCe-ECC-------Cc-EEEcCCeEEEEC
Confidence 1234588999999997 45888 589999984 442 11 112223356789
Q ss_pred ecCcCCCCcceEEEeeecC
Q psy12724 134 DVGPEDGYKSYQCRTKHRL 152 (167)
Q Consensus 134 ~v~~~D~~G~Y~C~a~n~~ 152 (167)
+++.+|+ |.|+|.|.|.+
T Consensus 270 ~v~~~d~-G~Y~C~A~N~~ 287 (308)
T 4fom_A 270 PLTFNYS-GVYICKVTNSL 287 (308)
T ss_dssp CCCSCCC-SEEEEEEEETT
T ss_pred CCChhhC-EEEEEEEEeCC
Confidence 9999999 99999999987
No 153
>1e07_A Carcinoembryonic antigen; glycoprotein, CEA, tumour marker, immunoglobulin-fold; NMR {Homo sapiens} PDB: 2dks_A
Probab=99.59 E-value=2.2e-14 Score=124.03 Aligned_cols=124 Identities=18% Similarity=0.243 Sum_probs=91.0
Q ss_pred eeeEEeEEEEEeCCcEEEEeecCCCCCCcceeeEEeeCCCceeeecCCceE------EEeeeEEEecCe-----------
Q psy12724 13 YEAQVYDVFVIKGNAAVFKCNLPSFVSDHLDVVSWADTDGGQYQIDNQDFV------VSQSYTVNIMDE----------- 75 (167)
Q Consensus 13 ~~~~~~~~~v~~G~~~~l~C~a~~~~~~~~~~i~W~k~~~~~~~~~~~~~v------~~g~y~c~~~~~----------- 75 (167)
....+.+..+.+|+++.|.|.+.+.|. +.+.|+|++. .+..+....+ ..|.|+|.+.+.
T Consensus 206 ~~~~~~~~~~~~G~~~~l~C~~~g~p~---~~i~W~~~g~-~i~~~~~L~i~~~~~~d~G~Y~C~a~n~~g~~~~s~~~~ 281 (642)
T 1e07_A 206 PTISPLNTSYRSGENLNLSCHAASNPP---AQYSWFVNGT-FQQSTQELFIPNITVNNSGSYTCQAHNSDTGLNRTTVTT 281 (642)
T ss_pred cEEecCCcccccCCEEEEEEEcCCCCC---cEEEEEECCe-EcccCCceEEecccccCCeEEEEEEEeCCCceEEeeeEE
Confidence 345566778899999999999977765 4799999853 4433222211 379999987430
Q ss_pred ------------------EEEeCCcEEEEeeeCCccCCcceeEEEEeCCCeeeEEeeeecCCceEEEc-cCCeEEEeecC
Q psy12724 76 ------------------HVLKGNSAVLKCHIPSFVADYVAVESWISDQGEELFVDMTESTDGKYLVL-PSGELHIRDVG 136 (167)
Q Consensus 76 ------------------~v~~G~~a~l~C~~~~~~~~p~p~i~W~k~~~~~l~~~~~~~~~~r~~~~-~~g~L~I~~v~ 136 (167)
.+..|+++.|.|.+.+ .| +.++|+||+ ..+. .+.++.+. .++.|.|.+++
T Consensus 282 v~v~~~~~~p~i~~~~~~~~~~g~~v~l~C~~~~---~p-~~v~W~~~g-~~l~------~~~~~~~~~~~~~L~i~~~~ 350 (642)
T 1e07_A 282 ITVYAEPPKPFITSNNSNPVEDEDAVALTCEPEI---QN-TTYLWWVNN-QSLP------VSPRLQLSNDNRTLTLLSVT 350 (642)
T ss_pred EEEEccCCCCEEEcCCceeEecCCcEEEEEECCC---CC-ccEEEEECC-ccCC------CcCCEEEeCCCCEEEEeccC
Confidence 1123778999999985 35 688999997 4552 24566554 35789999999
Q ss_pred cCCCCcceEEEeeecC
Q psy12724 137 PEDGYKSYQCRTKHRL 152 (167)
Q Consensus 137 ~~D~~G~Y~C~a~n~~ 152 (167)
.+|+ |.|+|.|.|..
T Consensus 351 ~~d~-G~Y~C~a~n~~ 365 (642)
T 1e07_A 351 RNDV-GPYECGIQNEL 365 (642)
T ss_pred cccC-eeEEEEEeCCC
Confidence 9999 99999999986
No 154
>2lu7_A Obscurin-like protein 1; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative, structural prote; NMR {Homo sapiens}
Probab=99.58 E-value=3.2e-15 Score=98.68 Aligned_cols=76 Identities=18% Similarity=0.292 Sum_probs=60.4
Q ss_pred cCeEEEeCCcEEEEeeeCCccCCcceeEEEEeCCCeeeEEeeeecCCceEEEccCC---eEEEeecCcCCCCcceEEEee
Q psy12724 73 MDEHVLKGNSAVLKCHIPSFVADYVAVESWISDQGEELFVDMTESTDGKYLVLPSG---ELHIRDVGPEDGYKSYQCRTK 149 (167)
Q Consensus 73 ~~~~v~~G~~a~l~C~~~~~~~~p~p~i~W~k~~~~~l~~~~~~~~~~r~~~~~~g---~L~I~~v~~~D~~G~Y~C~a~ 149 (167)
.+..+.+|+++.|.|.+. + |.|.++|+||+ ..|. .+.++.+..+| .|.|.+++.+|+ |.|+|.|.
T Consensus 4 t~v~~~~G~~v~l~C~vs---~-p~p~v~W~k~g-~~l~------~~~~~~~~~~~~~~~L~I~~~~~~D~-G~Y~C~a~ 71 (84)
T 2lu7_A 4 TRVRSTPGGDLELVVHLS---G-PGGPVRWYKDG-ERLA------SQGRVQLEQAGARQVLRVQGARSGDA-GEYLCDAP 71 (84)
T ss_dssp CCEEECTTSCEEEECCCS---C-CSTTCEEEETT-EECC------CCSSEEEEECSSCEEEEESSCSSTTC-EEEEEECT
T ss_pred eEEEEecCCCEEEEEEEC---C-CCcEEEEEECC-EEcc------ccccEEEeecCCeEEEEecCCCCccc-EEEEEEEC
Confidence 456788999999999985 3 77889999997 5664 35667666555 699999999999 99999998
Q ss_pred ecCcceEEEeee
Q psy12724 150 HRLTGETRLSAT 161 (167)
Q Consensus 150 n~~~~~~~l~~~ 161 (167)
|. +..+.|++.
T Consensus 72 n~-~~~a~l~V~ 82 (84)
T 2lu7_A 72 QD-SRIFLVSVE 82 (84)
T ss_dssp TT-CEEEEEEEC
T ss_pred CE-EEEEEEEEE
Confidence 86 456666663
No 155
>2yuz_A Myosin-binding protein C, SLOW-type; immunoglobulin domain, SLOW-type myosin-binding protein C, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.58 E-value=4.5e-15 Score=100.63 Aligned_cols=79 Identities=20% Similarity=0.259 Sum_probs=63.2
Q ss_pred EEEecCeEEEeCCcEEEEeeeCCccCCcceeEEEEeCCCeeeEEeeeecCCceEEEccCC---eEEEeecCcCCCCcceE
Q psy12724 69 TVNIMDEHVLKGNSAVLKCHIPSFVADYVAVESWISDQGEELFVDMTESTDGKYLVLPSG---ELHIRDVGPEDGYKSYQ 145 (167)
Q Consensus 69 ~c~~~~~~v~~G~~a~l~C~~~~~~~~p~p~i~W~k~~~~~l~~~~~~~~~~r~~~~~~g---~L~I~~v~~~D~~G~Y~ 145 (167)
.-...+..+.+|+++.|.|.+ . |.|.++|+||+ ..+. .+.|+.+..+| .|.|.+++.+|+ |.|+
T Consensus 11 ~~~~~~~~v~~G~~v~l~C~v--~---p~p~v~W~k~g-~~l~------~~~r~~i~~~~~~~~L~I~~v~~~D~-G~Y~ 77 (100)
T 2yuz_A 11 LTPLTDQTVNLGKEICLKCEI--S---ENIPGKWTKNG-LPVQ------ESDRLKVVQKGRIHKLVIANALTEDE-GDYV 77 (100)
T ss_dssp SBCCCCEEEETTSCCCEEEEC--S---SCCCEEEEETT-EECC------CCSSEEEEECSSEEEEEESSCCGGGC-SEEE
T ss_pred eccCCceEEcCCCCEEEEEEe--C---CCCeEEEEECC-EECC------CCCcEEEEEeCCEEEEEECCCChhhC-EEEE
Confidence 334567889999999999998 2 78889999998 5653 35677777666 699999999999 9999
Q ss_pred EEeeecC-cceEEEee
Q psy12724 146 CRTKHRL-TGETRLSA 160 (167)
Q Consensus 146 C~a~n~~-~~~~~l~~ 160 (167)
|.|.|.. +..+.|.+
T Consensus 78 C~a~N~~~~~~a~L~V 93 (100)
T 2yuz_A 78 FAPDAYNVTLPAKVHV 93 (100)
T ss_dssp EEESSSCCCEEEEEEE
T ss_pred EEEcCCCeeEEEEEEE
Confidence 9999984 44556655
No 156
>2wng_A Tyrosine-protein phosphatase non-receptor type substrate 1; signal regulatory protein alpha, immunoglobulin superfamily, phosphoprotein; HET: NAG; 2.49A {Homo sapiens}
Probab=99.58 E-value=6.3e-15 Score=117.41 Aligned_cols=125 Identities=11% Similarity=0.200 Sum_probs=78.8
Q ss_pred EEEEeCCcEEEEeecCCCCCCcceeeEEeeCCCceeeec--------C-Cce-E---E---------EeeeEEEecCe--
Q psy12724 20 VFVIKGNAAVFKCNLPSFVSDHLDVVSWADTDGGQYQID--------N-QDF-V---V---------SQSYTVNIMDE-- 75 (167)
Q Consensus 20 ~~v~~G~~~~l~C~a~~~~~~~~~~i~W~k~~~~~~~~~--------~-~~~-v---~---------~g~y~c~~~~~-- 75 (167)
..+.+|+++.|.|.+.+.+.+. ..+.|+|++. .+... . ..+ + + .|.|+|.+.+.
T Consensus 127 ~~~~~g~~~~l~C~~~g~p~~~-~~v~W~k~g~-~l~~~~~~~~~~~~~~~~~~~s~L~i~~~~~d~~g~Y~C~a~n~~~ 204 (327)
T 2wng_A 127 ARATPQHTVSFTCESHGFSPRD-ITLKWFKNGN-ELSDFQTNVDPVGESVSYSIHSTAKVVLTREDVHSQVICEVAHVTL 204 (327)
T ss_dssp SCBCTTCEEEEEEEEEEEBSSC-CEEEEEETTE-ECCCEEEEEECSSCCSCEEEEEEEEEECCTTGGGCEEEEEEECTTS
T ss_pred cccCCCCEEEEEEEEeCccCCC-cEEEEEECCE-EccccccccccccCCCceEEEEEEEEechhcCcCceEEEEEecccc
Confidence 4578899999999999877541 2799999853 33211 1 111 1 0 49999987530
Q ss_pred --------------------------EEEeCCcEEEEeeeCCccCCcce-eEEEEeCCCeeeEEeeeecCCceEEEccCC
Q psy12724 76 --------------------------HVLKGNSAVLKCHIPSFVADYVA-VESWISDQGEELFVDMTESTDGKYLVLPSG 128 (167)
Q Consensus 76 --------------------------~v~~G~~a~l~C~~~~~~~~p~p-~i~W~k~~~~~l~~~~~~~~~~r~~~~~~g 128 (167)
.+.+|+++.|.|.+.+. .|.+ .++|+||+ ..+.... ..++....+|
T Consensus 205 ~~~~~~~~~~~~~~v~~~P~i~~~~~~~~~G~~v~l~C~~~g~--~p~~~~v~W~k~g-~~l~~~~----~~~~~~~~~g 277 (327)
T 2wng_A 205 QGDPLRGTANLSETIRVPPTLEVTQQPVRAENQVNVTCQVRKF--YPQRLQLTWLENG-NVSRTET----ASTVTENKDG 277 (327)
T ss_dssp CSCCEEEEEEGGGTBCBCCEEEEEEECCSSTTCCEEEEEEEEE--BSSCEEEEEEETT-EEEEEEE----CCSCEECTTS
T ss_pred CCCcccceEEeccccCCCCEEEEecCCcCCCCcEEEEEEEccc--cCCCcEEEEEECC-eEccCcc----cCceEECCCC
Confidence 02379999999999753 2444 79999997 5664321 1223333343
Q ss_pred ------eEEEeecCcCCCCcceEEEeeecCcc
Q psy12724 129 ------ELHIRDVGPEDGYKSYQCRTKHRLTG 154 (167)
Q Consensus 129 ------~L~I~~v~~~D~~G~Y~C~a~n~~~~ 154 (167)
.|.|.++..+|+ |.|+|.|.|....
T Consensus 278 ~~~~~~~L~i~~~~~~d~-G~Y~C~a~N~~~~ 308 (327)
T 2wng_A 278 TYNWMSWLLVNVSAHRDD-VKLTCQVEHDGQP 308 (327)
T ss_dssp CEEEEEEEEC-------C-CEEEEEEEETTCC
T ss_pred cEEEEEEEEEccccccCC-CEEEEEEEeCCCC
Confidence 488999999998 9999999998733
No 157
>2oz4_A Intercellular adhesion molecule 1; IGSF domain, structural plasticity, cell-surface dimerizatio adhesion; HET: NAG FUC; 2.70A {Homo sapiens} SCOP: b.1.1.3 b.1.1.4 b.1.1.4 PDB: 1p53_A*
Probab=99.58 E-value=9.9e-15 Score=113.18 Aligned_cols=109 Identities=17% Similarity=0.168 Sum_probs=78.3
Q ss_pred eEEeEEEEEeCCcEEEEeecCCCCCCcceeeEEeeCCCceeeecCCc---eE------EEeeeEEEecC-----------
Q psy12724 15 AQVYDVFVIKGNAAVFKCNLPSFVSDHLDVVSWADTDGGQYQIDNQD---FV------VSQSYTVNIMD----------- 74 (167)
Q Consensus 15 ~~~~~~~v~~G~~~~l~C~a~~~~~~~~~~i~W~k~~~~~~~~~~~~---~v------~~g~y~c~~~~----------- 74 (167)
..+.+..+.+|+++.|.|.+. +. +.++| ++..+..++.+ .+ ..|.|+|.+.+
T Consensus 103 ~~~~~~~v~~G~~v~l~C~~~--p~---~~i~W---~g~~~~~~~~~~~l~i~~~~~~~~g~Y~C~a~n~~~g~~~~~s~ 174 (265)
T 2oz4_A 103 VILTKPEVSEGTEVTVKCEAH--PR---AKVTL---NGVPAQPLGPRAQLLLKATPEDNGRSFSCSATLEVAGQLIHKNQ 174 (265)
T ss_dssp EEESCSEEETTCEEEEEEECC--TT---SEEEE---SSCSSSCCSSEECCEEECCGGGTTEEEEEEEEEECSSSEEEEEE
T ss_pred eecCCceecCCCcEEEEEEcc--CC---CEEEE---CCEEccCCCCcEEEEEccccccCCceEEEEEEcCCCCCcccccc
Confidence 345567789999999999998 33 47999 34444322221 11 14679997631
Q ss_pred --------------------eEEEeCCcEEEEeeeCCccCCcceeEEEEeCCCeeeEEeeeecCCceEEEccCCeEEEee
Q psy12724 75 --------------------EHVLKGNSAVLKCHIPSFVADYVAVESWISDQGEELFVDMTESTDGKYLVLPSGELHIRD 134 (167)
Q Consensus 75 --------------------~~v~~G~~a~l~C~~~~~~~~p~p~i~W~k~~~~~l~~~~~~~~~~r~~~~~~g~L~I~~ 134 (167)
..+.+|+++.|.|.+. |+|.|.++|+|++. .+ +.+|.|. +
T Consensus 175 ~~~l~V~~~p~~~~~~~p~~~~v~~g~~~~l~C~~~---g~P~p~i~W~~~~~-~~--------------~~~g~~~--~ 234 (265)
T 2oz4_A 175 TRELRVLYGPRLDERDCPGNWTWPENSQQTPMCQAW---GNPLPELKCLKDGT-FP--------------LPIGESV--T 234 (265)
T ss_dssp EEEEEEEEEEECCGGGSCSEEEEETTCEECCCCCCE---EESCCEEEEEETTT-EE--------------CCTTSCE--E
T ss_pred cEEEEEEeCCccccccCCCccEEcCCCeEEEEeECc---cCCCCeEEEEECCc-cc--------------CCCCcEE--E
Confidence 2457899999999987 56999999999973 11 2345554 4
Q ss_pred cCcCCCCcceEEEeeecC
Q psy12724 135 VGPEDGYKSYQCRTKHRL 152 (167)
Q Consensus 135 v~~~D~~G~Y~C~a~n~~ 152 (167)
++.+|+ |.|+|.|.|..
T Consensus 235 v~~~d~-G~Y~C~a~N~~ 251 (265)
T 2oz4_A 235 VTRDLE-GTYLCRARSTQ 251 (265)
T ss_dssp CCGGGC-EEEEEEEEETT
T ss_pred eehhhC-eEEEEEEECCC
Confidence 889998 99999999987
No 158
>2if7_A SLAM family member 6; NTB-A, homophilic receptor, immune system; 3.00A {Homo sapiens}
Probab=99.57 E-value=5.4e-14 Score=105.02 Aligned_cols=120 Identities=15% Similarity=0.214 Sum_probs=81.4
Q ss_pred eEEeEEEEEeCCcEEEEeecCCCCCCcceeeEEeeCCCceee---ec----------C----Cc-------eE-------
Q psy12724 15 AQVYDVFVIKGNAAVFKCNLPSFVSDHLDVVSWADTDGGQYQ---ID----------N----QD-------FV------- 63 (167)
Q Consensus 15 ~~~~~~~v~~G~~~~l~C~a~~~~~~~~~~i~W~k~~~~~~~---~~----------~----~~-------~v------- 63 (167)
..|+.+.+.+|+++.|.|.+.+... .+.|.|.|++ ..+. +. . .| .+
T Consensus 3 ~~p~~v~~~~G~~v~L~C~~~~~~~--~~~v~W~~~~-~~i~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~sL~I~~v~~ 79 (193)
T 2if7_A 3 LTPLMVNGILGESVTLPLEFPAGEK--VNFITWLFNE-TSLAFIVPHETKSPEIHVTNPKQGKRLNFTQSYSLQLSNLKM 79 (193)
T ss_dssp CCCEEEEEETTSCEEECCCCCCCSC--CCEEEEEETT-EEEEEEECCSSSCCEEEECCHHHHTTEEECTTCCEEECSCCG
T ss_pred CCCeEEEEEecCeEEEeccCCCccc--ccEEEEEECC-EEEEEEecccCCCCceeecCccccccEEECCCeEEEECCCCc
Confidence 4678899999999999999975332 3579999974 2221 10 0 01 11
Q ss_pred -EEeeeEEEecCe----------EE----------------EeCC-cEEEEeeeCCccCCcceeEEEEeCCCeeeEEeee
Q psy12724 64 -VSQSYTVNIMDE----------HV----------------LKGN-SAVLKCHIPSFVADYVAVESWISDQGEELFVDMT 115 (167)
Q Consensus 64 -~~g~y~c~~~~~----------~v----------------~~G~-~a~l~C~~~~~~~~p~p~i~W~k~~~~~l~~~~~ 115 (167)
.+|.|+|.+.+. .| ..|+ ++.|.|.+.+ ..|.|.++|+|++ ..+.
T Consensus 80 ~D~G~Y~C~~~~~~~~~~~~~~L~V~~~~~~p~i~~~~~~~~~g~~~v~L~C~~~g--~~p~p~i~W~~~g-~~l~---- 152 (193)
T 2if7_A 80 EDTGSYRAQISTKTSAKLSSYTLRILRQLRNIQVTNHSQLFQNMTCELHLTCSVED--ADDNVSFRWEALG-NTLS---- 152 (193)
T ss_dssp GGCEEEEEEEECSSCEEEEEEEEEEECCCEEEEEEECCC---CSSEEEEEEEEEES--CCTTCEEEEEETT-EEEE----
T ss_pred ccCceEEEEEEecCCCeEEEEEEEEEccCCCCeEecCceeecCCCceEEEEEEEec--CCCceEEEEEeCC-EEcC----
Confidence 279999987430 01 1344 7999999975 2368899999986 3331
Q ss_pred ecCCceEEEccCCeEEEeecCcC-CCCcceEEEeeecCcce
Q psy12724 116 ESTDGKYLVLPSGELHIRDVGPE-DGYKSYQCRTKHRLTGE 155 (167)
Q Consensus 116 ~~~~~r~~~~~~g~L~I~~v~~~-D~~G~Y~C~a~n~~~~~ 155 (167)
.++.|.|+..... |+ |.|+|.|.|.++..
T Consensus 153 ----------~~~~l~i~~~~~~~d~-G~Y~C~a~N~~g~~ 182 (193)
T 2if7_A 153 ----------SQPNLTVSWDPRISSE-QDYTCIAENAVSNL 182 (193)
T ss_dssp ----------SSSEEEEEECTTTCSC-CEEEEEEEETTEEE
T ss_pred ----------CCCeEEEEeccCcCCC-CcEEEEEECCCCcc
Confidence 2346888765554 88 99999999998443
No 159
>3qs9_E FL cytokine receptor; immunoglobulin-like domain, four-helical bundle cytokine, hematopoietic cytokine-receptor complex, cell surface, EXTR complex; 7.80A {Homo sapiens}
Probab=99.57 E-value=9.1e-15 Score=125.51 Aligned_cols=132 Identities=13% Similarity=0.146 Sum_probs=85.8
Q ss_pred EEEeCCcEEEEeecCCCCCCcceeeEEeeCCCceeee----cCC----ceE----EEeeeEEEecC--------------
Q psy12724 21 FVIKGNAAVFKCNLPSFVSDHLDVVSWADTDGGQYQI----DNQ----DFV----VSQSYTVNIMD-------------- 74 (167)
Q Consensus 21 ~v~~G~~~~l~C~a~~~~~~~~~~i~W~k~~~~~~~~----~~~----~~v----~~g~y~c~~~~-------------- 74 (167)
....|+.+.|.|.+.+.|. |.|+|+++++..... ... ..+ ..|.|+|.+.|
T Consensus 150 ~~~~~~~~~L~C~a~G~P~---P~i~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~G~Y~C~A~N~~G~~~~~~~~l~V 226 (527)
T 3qs9_E 150 FRKMENQDALVCISESVPE---PIVEWVLCDSQGESCKEESPAVVKKEEKVLHELFGTDIRCCARNELGRECTRLFTIDL 226 (527)
T ss_dssp EEECSSSSCEEEEEEESSC---CEEEEEEC-------------CEEECCSEECCCCSSCEEEEEECSSCEEEEECEEEES
T ss_pred EEecCCceEEEEEEceecC---CeEEEEECCCCCccccccCCcEEEEeeeeccccCCEEEEEEEEeCCCcccceEEEEEE
Confidence 3456888899999999876 489999986532110 000 011 27999998753
Q ss_pred ----------eEEEeCCcEEEEeeeCCccCCcceeEEEEeCCCeeeEEeeeecCCceE----EEccCCeEEEeecCcCCC
Q psy12724 75 ----------EHVLKGNSAVLKCHIPSFVADYVAVESWISDQGEELFVDMTESTDGKY----LVLPSGELHIRDVGPEDG 140 (167)
Q Consensus 75 ----------~~v~~G~~a~l~C~~~~~~~~p~p~i~W~k~~~~~l~~~~~~~~~~r~----~~~~~g~L~I~~v~~~D~ 140 (167)
..+.+|+++.|.|.+.+ ++|.|.++|+|++. .+..... ....++ ....++.|.|.+++.+|+
T Consensus 227 ~~~p~~~p~~~~v~~G~~v~L~C~~~~--g~p~p~i~W~k~g~-~l~~~~~-~~~~~~~~~~~~~~~~~L~I~~v~~~Ds 302 (527)
T 3qs9_E 227 NQTPQTTLPQLFLKVGEPLWIRCKAVH--VNHGFGLTWELENK-ALEEGNY-FEMSTYSTNRTMIRILFAFVSSVARNDT 302 (527)
T ss_dssp SSCCCCSCCEEEECTTSCEEEEEEEEE--SSSCCCEEEECSSS-CCCGGGE-EEEEEEETTTEEEEEEEEEESSCCGGGC
T ss_pred eccCccCCCceEEeCCCeEEEEEEEcc--CCCCeEEEEEECCE-ECCCCce-eeeeeeccCcceeeEEEEEEccCCcccC
Confidence 24568999999999952 45899999999983 4421000 000011 122345799999999999
Q ss_pred CcceEEEeeecCcceEEEee
Q psy12724 141 YKSYQCRTKHRLTGETRLSA 160 (167)
Q Consensus 141 ~G~Y~C~a~n~~~~~~~l~~ 160 (167)
|.|+|.|.|..+..+.|.+
T Consensus 303 -G~Y~C~a~N~~~~~~~L~V 321 (527)
T 3qs9_E 303 -GYYTCSSSKHPSQSALVTI 321 (527)
T ss_dssp -EEEEEEETTEEEEEEEEEE
T ss_pred -eEEEEEEEeCCCceEEEEE
Confidence 9999999998544455554
No 160
>2gki_A Nuclease; anti-DNA antibody, catalytic antibody, immune system; 2.88A {Mus musculus}
Probab=99.57 E-value=4.8e-14 Score=111.75 Aligned_cols=147 Identities=16% Similarity=0.246 Sum_probs=93.1
Q ss_pred eeceeeEEeEEEEEeCCcEEEEeecCCCCCCcceeeEEeeCC-Cce---eee-c------------CCc-----------
Q psy12724 10 SQYYEAQVYDVFVIKGNAAVFKCNLPSFVSDHLDVVSWADTD-GGQ---YQI-D------------NQD----------- 61 (167)
Q Consensus 10 ~~~~~~~~~~~~v~~G~~~~l~C~a~~~~~~~~~~i~W~k~~-~~~---~~~-~------------~~~----------- 61 (167)
.+....++..+.+.+|+++.|.|.+.+.+.. .+.+.|+|++ +.. +.. + ..|
T Consensus 22 ~~~~v~~p~~~~v~~G~~v~L~C~~~~~~~~-~~~v~W~r~~~~~~~~~l~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~ 100 (291)
T 2gki_A 22 REVQLQQSGPELVKPGASVKMSCKASGYTFT-SYVMHWVKQKPGQGLEWIGYINPYNDGTKYNEKFKGKATLTSDKSSST 100 (291)
T ss_dssp -CCEEEECCCEEECTTCCEEEEEEEESSCGG-GSCEEEEEECTTSCCEEEEEEETTTTEEEECGGGBTTBCEEEEGGGTE
T ss_pred ccEEEEcCCcEEecCCCCEEEEEeccCCccc-ccEEEEEEECCCCCcEEEEEEecCCCccccCcccCCCEEEEEeCCCCE
Confidence 3445566778999999999999999876521 2469999853 111 100 0 011
Q ss_pred -eE--------EEeeeEEEecC----------------------------------------------eEEEeCCcEEEE
Q psy12724 62 -FV--------VSQSYTVNIMD----------------------------------------------EHVLKGNSAVLK 86 (167)
Q Consensus 62 -~v--------~~g~y~c~~~~----------------------------------------------~~v~~G~~a~l~ 86 (167)
.+ .+|.|.|.+.+ ..+.+|+++.|.
T Consensus 101 ~sL~I~~v~~~DsG~Y~C~~~~~~~g~~~~~~~~~~~L~V~~~~~~~~~~~~~~~~~~~~~v~~~p~~~~v~~G~~v~L~ 180 (291)
T 2gki_A 101 AYMELSSLTSEDSAVYYCARGAYKRGYAMDYWGQGTSVTVSSRGGGGSGGGGSGGGGSDLVMSQSPSSLAVSAGEKVTMS 180 (291)
T ss_dssp EEEEECSCCGGGCEEEEEEEECGGGTTCEEEECCCEEEEECC----------------CCCEECSCSEEEEETTSCEEEE
T ss_pred EEEEECcCCHHHCEEEEEEEeccccccccceeCCCcEEEEecCCccccccccCCCCCccceEEcCCCEEEEcCCCcEEEE
Confidence 11 16888887521 124579999999
Q ss_pred eeeCCccCCcce------eEEEEeCC-Ceee--EEeee----ecCCceEEEccC---CeEEEeecCcCCCCcceEEEeee
Q psy12724 87 CHIPSFVADYVA------VESWISDQ-GEEL--FVDMT----ESTDGKYLVLPS---GELHIRDVGPEDGYKSYQCRTKH 150 (167)
Q Consensus 87 C~~~~~~~~p~p------~i~W~k~~-~~~l--~~~~~----~~~~~r~~~~~~---g~L~I~~v~~~D~~G~Y~C~a~n 150 (167)
|.+.+. |.| .+.|+|++ +..+ .-... ....+||.+..+ +.|.|++++.+|+ |.|.|.|.|
T Consensus 181 C~~~~~---~~~~~~~~~~v~W~k~~~g~~~~~l~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~Ds-G~Y~C~a~~ 256 (291)
T 2gki_A 181 CKSSQS---LFNSRTRKNYLAWYQQKPGQSPKLLIYWASTRESGVPDRFTGSGSGTDFTLTISSVQAEDL-AVYYCKQSY 256 (291)
T ss_dssp EEESSC---CEETTTTEECEEEEEECTTSCCEEEEETTTEECTTCCTTEEEEEETTEEEEEESSCCGGGC-EEEEEEEEE
T ss_pred EEcCCc---cccccccceeEEEEEECCCCCcEEEEEEcccCCCCcCCCEEEEecCCEEEEEECCCCHHHC-EEEEEEEcc
Confidence 999743 554 89999963 1211 11000 001456765432 3799999999999 999999999
Q ss_pred cC----cceEEEeee
Q psy12724 151 RL----TGETRLSAT 161 (167)
Q Consensus 151 ~~----~~~~~l~~~ 161 (167)
.. ..-++|.+.
T Consensus 257 ~~~~~fg~gt~l~v~ 271 (291)
T 2gki_A 257 YHMYTFGSGTKLEIK 271 (291)
T ss_dssp TTEEEECCCEEEEEE
T ss_pred CCceEEcCCEEEEEE
Confidence 53 445555553
No 161
>2eo9_A Roundabout homolog 1; beta-sandwich, IG-fold, H-ROBO-1, deleted in U twenty twenty, neurogenesis, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.57 E-value=6.4e-15 Score=101.74 Aligned_cols=74 Identities=22% Similarity=0.282 Sum_probs=62.0
Q ss_pred EEEecCeEEEeCCcEEEEeeeCCccCCcceeEEEEeCCCeeeEEeeeecCCceEEEccCCeEEEeecCcCCCCcceEEEe
Q psy12724 69 TVNIMDEHVLKGNSAVLKCHIPSFVADYVAVESWISDQGEELFVDMTESTDGKYLVLPSGELHIRDVGPEDGYKSYQCRT 148 (167)
Q Consensus 69 ~c~~~~~~v~~G~~a~l~C~~~~~~~~p~p~i~W~k~~~~~l~~~~~~~~~~r~~~~~~g~L~I~~v~~~D~~G~Y~C~a 148 (167)
...+.+..+.+|+++.|.|.+. |.|.|.++|+|++ ..+. ....++.+..+|.|.|.+++.+|+ |.|+|.|
T Consensus 12 ~~~p~~~~v~~G~~v~l~C~~~---g~p~p~i~W~k~g-~~~~-----~~~~~~~~~~~~~L~i~~v~~~D~-G~Y~C~a 81 (118)
T 2eo9_A 12 RQGPVNQTVAVDGTFVLSCVAT---GSPVPTILWRKDG-VLVS-----TQDSRIKQLENGVLQIRYAKLGDT-GRYTCIA 81 (118)
T ss_dssp SBCCCCEEEETTCEEEEECBCC---CSSCCEEEEEESS-SBCC-----TTSTTEEEEETTEEEEESCCGGGC-CCEEEEE
T ss_pred EcCCCCEEEcCCCeEEEEEEEE---ecCCCEEEEEECC-EECc-----CCCCeEEEccCCEEEEccCCcCCC-EEEEEEE
Confidence 3345567889999999999997 4588999999997 4552 235778888899999999999999 9999999
Q ss_pred eecC
Q psy12724 149 KHRL 152 (167)
Q Consensus 149 ~n~~ 152 (167)
.|..
T Consensus 82 ~n~~ 85 (118)
T 2eo9_A 82 STPS 85 (118)
T ss_dssp ECSS
T ss_pred EcCC
Confidence 9987
No 162
>3o4o_C Interleukin-1 receptor type 2; cytokine-receptor complex, beta-trefoil, IG-like fold, immun; HET: NAG; 3.30A {Homo sapiens}
Probab=99.57 E-value=5.5e-15 Score=118.00 Aligned_cols=125 Identities=12% Similarity=0.191 Sum_probs=86.8
Q ss_pred EEEEeCCcEEEEee-----cCCCCCCcceeeEEeeCCCceeeecCCc--------eE--------EEeeeEEEecC----
Q psy12724 20 VFVIKGNAAVFKCN-----LPSFVSDHLDVVSWADTDGGQYQIDNQD--------FV--------VSQSYTVNIMD---- 74 (167)
Q Consensus 20 ~~v~~G~~~~l~C~-----a~~~~~~~~~~i~W~k~~~~~~~~~~~~--------~v--------~~g~y~c~~~~---- 74 (167)
..+.+|+++.|.|. +.+.|. +.+.|+|++. .+..+..+ .+ ..|.|+|.+.+
T Consensus 130 ~~~~~g~~v~l~C~~~~~~~~g~p~---~~v~W~k~g~-~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~n~~g~ 205 (339)
T 3o4o_C 130 QILTLSTSGVLVCPDLSEFTRDKTD---VKIQWYKDSL-LLDKDNEKFLSVRGTTHLLVHDVALEDAGYYRCVLTFAHEG 205 (339)
T ss_dssp EEEETTSCEEEECCSCTTTCCSSSC---CCBCCEESSC-BCCTTCSSEEECTTSSEEEESSCCGGGCEEEEEEEECCBTT
T ss_pred eEEECCCCEEEEecCCcccccCCCC---ceEEEecCCe-eCCCCCceeEEcCCcceEEEcccCHhhCeEEEEEEEECCCC
Confidence 47889999999999 565554 4799999754 34322111 11 27999998742
Q ss_pred ------------------------------eEEEeCCcEEEEeee---CCccCCc-ceeEEEEeCCCeeeEEeee---ec
Q psy12724 75 ------------------------------EHVLKGNSAVLKCHI---PSFVADY-VAVESWISDQGEELFVDMT---ES 117 (167)
Q Consensus 75 ------------------------------~~v~~G~~a~l~C~~---~~~~~~p-~p~i~W~k~~~~~l~~~~~---~~ 117 (167)
..+.+|+++.|.|.+ . +.| .|.+.|++++ ..+..... ..
T Consensus 206 ~~~~~~~~~~l~V~~~~~~~~P~i~~~~~~~~v~~G~~v~L~C~~~~~~---g~P~~~~v~W~~~g-~~~~~~~~~~~~~ 281 (339)
T 3o4o_C 206 QQYNITRSIELRIKKKKEETIPVIISPLKTISASLGSRLTIPCKVFLGT---GTPLTTMLWWTAND-THIESAYPGGRVT 281 (339)
T ss_dssp BCCEEEEEEEEEEECCCCCCCCEECCCSCCCCCCCCSCCCCCCCEEESS---SCCSSCEEEEESSS-SCSSSSSCSSSCE
T ss_pred eEEEEEEEEEEEEEcCCCCCCCEEecCCceeEeccCCCEEEEEEEECCC---CCCCCceEEEEECC-eecccccccccce
Confidence 012459999999999 6 457 8899999987 34311000 01
Q ss_pred CCceEEEccCC------eEEEeecCcCCCCcceEEEeeecC
Q psy12724 118 TDGKYLVLPSG------ELHIRDVGPEDGYKSYQCRTKHRL 152 (167)
Q Consensus 118 ~~~r~~~~~~g------~L~I~~v~~~D~~G~Y~C~a~n~~ 152 (167)
.+.++.+..+| .|.|.+++.+|+-|.|+|.|.|..
T Consensus 282 ~~~~~~~~~~g~~~~~~~L~i~~v~~~d~~G~Y~C~a~N~~ 322 (339)
T 3o4o_C 282 EGPRQEYSENNENYIEVPLIFDPVTREDLHMDFKCVVHNTL 322 (339)
T ss_dssp ECCCEECCCSSSCEEEECCEECSSCCCSCCCCCEEEEEETT
T ss_pred ecceEEecccCceEEEEEEEEEEechhhcCccEEEEEEecc
Confidence 23456666667 799999999992189999999987
No 163
>1qgc_4 Protein (immunoglobulin); virus-antibody complex, icosahedral virus, virus-immune SYST complex; 30.00A {Mus musculus} SCOP: i.6.1.1
Probab=99.57 E-value=6.4e-15 Score=121.26 Aligned_cols=122 Identities=21% Similarity=0.365 Sum_probs=82.3
Q ss_pred EEeCCcEEEEeecCCCCCCcce-eeEEeeCCCceeeec----------CCc------eE--------EEeeeEEEecC--
Q psy12724 22 VIKGNAAVFKCNLPSFVSDHLD-VVSWADTDGGQYQID----------NQD------FV--------VSQSYTVNIMD-- 74 (167)
Q Consensus 22 v~~G~~~~l~C~a~~~~~~~~~-~i~W~k~~~~~~~~~----------~~~------~v--------~~g~y~c~~~~-- 74 (167)
+.+|+++.|.|.+.+..++ + .++|+|++. .+... .+. .+ ..|.|+|.+.+
T Consensus 128 ~~~g~~~~l~C~~~g~~p~--~~~v~W~k~g~-~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~n~~ 204 (438)
T 1qgc_4 128 QLTSGGASVVCFLNNFYPK--DINVKWKIDGS-ERQNGVLNSWTDQDSKDSTYSMSSTLTLTKDEYERHNSYTCEATHKT 204 (438)
T ss_dssp HHHTTEEEEEEEEEEEBSS--CEEEEEEETTE-EECTTEEEEEECCCTTTCCEEEEEEEEEEHHHHHTCCEEEEEEEETT
T ss_pred hccCCceEEEEEEccccCC--CcEEEEEECCE-EcCCCceeccccccCCCCcEEEEEEEEEeCcccCCCCeEEEEEEecc
Confidence 3468999999999874322 3 799999743 33221 111 11 16999998632
Q ss_pred -----------------------eEEEeCCcEEEEeeeCCccCCc--ceeEEEEeCC-CeeeEEe--e---------eec
Q psy12724 75 -----------------------EHVLKGNSAVLKCHIPSFVADY--VAVESWISDQ-GEELFVD--M---------TES 117 (167)
Q Consensus 75 -----------------------~~v~~G~~a~l~C~~~~~~~~p--~p~i~W~k~~-~~~l~~~--~---------~~~ 117 (167)
..+.+|+++.|.|.+.+. | .+.++|+|++ +..+... . ...
T Consensus 205 ~~~~~~~~~~~~~~~~~~~~~~~~~v~~G~~v~L~C~~~g~---p~~~~~v~W~k~~~g~~~~~~~~~~~~~~~~~~~~~ 281 (438)
T 1qgc_4 205 STSPIVKSFNRNECEVMLVESGGGLVKPGGSLKLSCTASGF---IFNRCAMSWVRQTPEKRLEWVATISSGGTYTYYPDS 281 (438)
T ss_dssp CSSCEEEEEETTC-CCEEEEECCEEECTTCCEEEEEEEESS---CGGGSCEEEEEEETTTEEEEEEEECTTSCCEECCGG
T ss_pred cCCceecccccccceeEEecCCceEEecCCcEEEEEEEccc---ccCCcEEEEEECCCCCCcEEEEEEeecCCceecCcc
Confidence 245689999999999753 5 6789999972 1222110 0 001
Q ss_pred CCceEEEccC-----CeEEEeecCcCCCCcceEEEeee
Q psy12724 118 TDGKYLVLPS-----GELHIRDVGPEDGYKSYQCRTKH 150 (167)
Q Consensus 118 ~~~r~~~~~~-----g~L~I~~v~~~D~~G~Y~C~a~n 150 (167)
..+|+.+..+ ..|.|.+++.+|+ |.|+|.|.|
T Consensus 282 ~~~r~~~~~~~~~~~~~L~I~~v~~~D~-G~Y~C~a~n 318 (438)
T 1qgc_4 282 VKGRFTISRDNAKNTLYLQMSSLRSADT-AMYYCVRRE 318 (438)
T ss_dssp GTTTEEEEEETTTTEEEEEECSCCGGGC-CEEEEEECC
T ss_pred cCCcEEEEeecCCCeEEEEECCCChhhC-EEEEEEEEc
Confidence 2467766542 2799999999999 999999998
No 164
>2kdg_A Myotilin; immonoglobulin domain, actin-binding, structural protein, cell membrane, cytoplasm, cytoskeleton, disease mutation, immunoglobulin domain; NMR {Homo sapiens}
Probab=99.57 E-value=1.4e-14 Score=96.62 Aligned_cols=85 Identities=19% Similarity=0.224 Sum_probs=63.1
Q ss_pred eEEEecCeEEEeCCcEEEEeeeCCccCCcceeEEEEeCCCeeeEEeeeecCCceEEEccCC--eEEEeecCcCCCCcceE
Q psy12724 68 YTVNIMDEHVLKGNSAVLKCHIPSFVADYVAVESWISDQGEELFVDMTESTDGKYLVLPSG--ELHIRDVGPEDGYKSYQ 145 (167)
Q Consensus 68 y~c~~~~~~v~~G~~a~l~C~~~~~~~~p~p~i~W~k~~~~~l~~~~~~~~~~r~~~~~~g--~L~I~~v~~~D~~G~Y~ 145 (167)
+...+.+..+.+|+++.|.|.+.+ .|.|.++|+|++ ..+... ...++....+| .|.|.+++.+|+ |.|+
T Consensus 8 ~~~~p~~~~~~~G~~~~l~C~~~g---~p~p~v~W~~~g-~~~~~~----~~~~~~~~~~~~~~L~i~~v~~~D~-G~Y~ 78 (100)
T 2kdg_A 8 FIQVPENMSIDEGRFCRMDFKVSG---LPAPDVSWYLNG-RTVQSD----DLHKMIVSEKGLHSLIFEVVRASDA-GAYA 78 (100)
T ss_dssp CCCCCCCEEEETTCCEEEEEECEE---ESCCEEEEEETT-EEECCC----SSSCEEEETTTEEEEEESSCCGGGC-EEEE
T ss_pred EEeCCCCEEecCCCEEEEEEEEEe---eCCCEEEEEECC-EECcCC----CcEEEEEcCCCeEEEEECCCCcccC-EEEE
Confidence 333455678899999999999974 588999999997 555321 22344445555 899999999999 9999
Q ss_pred EEeeecC---cceEEEeee
Q psy12724 146 CRTKHRL---TGETRLSAT 161 (167)
Q Consensus 146 C~a~n~~---~~~~~l~~~ 161 (167)
|.|.|.. +..+.|.+.
T Consensus 79 C~a~n~~g~~~~~~~l~V~ 97 (100)
T 2kdg_A 79 CVAKNRAGEATFTVQLDVL 97 (100)
T ss_dssp EEEEETTEEEEEEEEEEEE
T ss_pred EEEEcCCCeEEEEEEEEEE
Confidence 9999987 334455543
No 165
>3puc_A Titin; I-SET IG-like domain, M-BAND, transferase; 0.96A {Homo sapiens}
Probab=99.57 E-value=1.8e-14 Score=95.82 Aligned_cols=82 Identities=18% Similarity=0.320 Sum_probs=63.1
Q ss_pred eEEEecCeEEEeCCcEEEEeeeCCccCCcceeEEEEeCCCeeeEEeeeecCCceEEEccCC---eEEEeecCcCCCCcce
Q psy12724 68 YTVNIMDEHVLKGNSAVLKCHIPSFVADYVAVESWISDQGEELFVDMTESTDGKYLVLPSG---ELHIRDVGPEDGYKSY 144 (167)
Q Consensus 68 y~c~~~~~~v~~G~~a~l~C~~~~~~~~p~p~i~W~k~~~~~l~~~~~~~~~~r~~~~~~g---~L~I~~v~~~D~~G~Y 144 (167)
+.-.+.+..+.+|+++.|.|.+.+ .|.|.++|+|++ ..+. .+.++.+..++ .|.|.+++.+|+ |.|
T Consensus 9 i~~~~~~~~v~~G~~~~l~C~~~g---~p~p~v~W~~~g-~~~~------~~~~~~~~~~~~~~~L~i~~~~~~d~-G~Y 77 (99)
T 3puc_A 9 IVTGLQDTTVSSDSVAKFAVKATG---EPRPTAIWTKDG-KAIT------QGGKYKLSEDKGGFFLEIHKTDTSDS-GLY 77 (99)
T ss_dssp EEECCCCEEEESSSCEEEEEEEEE---ESCCEEEEEETT-EECC------SSSSEEEEEETTEEEEEECSCCGGGC-EEE
T ss_pred EEecCccEEEeCCCcEEEEEEEEe---cCCCEEEEEECC-EECc------CCCCEEEEEeCCEEEEEECCCCcccC-EEE
Confidence 334456678899999999999974 588999999987 4553 35667666544 699999999999 999
Q ss_pred EEEeeecC---cceEEEee
Q psy12724 145 QCRTKHRL---TGETRLSA 160 (167)
Q Consensus 145 ~C~a~n~~---~~~~~l~~ 160 (167)
+|.|.|.. +..+.|.+
T Consensus 78 ~C~a~n~~g~~~~~~~l~V 96 (99)
T 3puc_A 78 TCTVKNSAGSVSSSCKLTI 96 (99)
T ss_dssp EEEEEETTEEEEEEEEEEE
T ss_pred EEEEEeCCCcEeEEEEEEE
Confidence 99999987 33444444
No 166
>1g1c_A Immunoglobulin-like domain I1 from titin; immunoglobulin domain, beta-sandwhich, I-SET, structural protein; 2.10A {Homo sapiens} SCOP: b.1.1.4
Probab=99.56 E-value=2.5e-14 Score=95.30 Aligned_cols=74 Identities=19% Similarity=0.213 Sum_probs=58.1
Q ss_pred eEEEecCeEEEeCCcEEEEeeeCCccCCcceeEEEEeCCCeeeEEeeeecCCceEEEc--cCC--eEEEeecCcCCCCcc
Q psy12724 68 YTVNIMDEHVLKGNSAVLKCHIPSFVADYVAVESWISDQGEELFVDMTESTDGKYLVL--PSG--ELHIRDVGPEDGYKS 143 (167)
Q Consensus 68 y~c~~~~~~v~~G~~a~l~C~~~~~~~~p~p~i~W~k~~~~~l~~~~~~~~~~r~~~~--~~g--~L~I~~v~~~D~~G~ 143 (167)
+.-.+.+..+.+|+++.|.|.+.+ .|.|.++|+|++ ..+. ...++.+. .++ .|.|.+++.+|+ |.
T Consensus 8 ~~~~~~~~~v~~G~~v~l~C~~~g---~p~p~v~W~k~g-~~~~------~~~~~~~~~~~~~~~~L~i~~v~~~D~-G~ 76 (99)
T 1g1c_A 8 IFERIQSQTVGQGSDAHFRVRVVG---KPDPECEWYKNG-VKIE------RSDRIYWYWPEDNVCELVIRDVTGEDS-AS 76 (99)
T ss_dssp EEECCCCEEEETTSCEEEEEEEEE---ESCCEEEEEETT-EECC------CCSSEEEEEEETTEEEEEECSCCGGGC-EE
T ss_pred eEecCcceEEcCCCcEEEEEEEEE---eCCCEEEEEECC-EECC------CCCCEEEEEcCCCEEEEEECCCCcCCC-EE
Confidence 444556788999999999999984 589999999997 4553 23344332 234 799999999999 99
Q ss_pred eEEEeeecC
Q psy12724 144 YQCRTKHRL 152 (167)
Q Consensus 144 Y~C~a~n~~ 152 (167)
|+|.|.|..
T Consensus 77 Y~C~a~N~~ 85 (99)
T 1g1c_A 77 IMVKAINIA 85 (99)
T ss_dssp EEEEEEETT
T ss_pred EEEEEEECC
Confidence 999999987
No 167
>2kkq_A Myotilin; unknown function, actin-binding, cell membrane, cytoplasm, cytoskeleton, disease mutation, immunoglobulin domain; NMR {Homo sapiens}
Probab=99.56 E-value=1.5e-14 Score=100.15 Aligned_cols=77 Identities=19% Similarity=0.310 Sum_probs=62.6
Q ss_pred eeeEEEecCeEEEeCCcEEEEeeeCCccCCcceeEEEEeCCCeeeEEeeeecCCceEEEccCC----eEEEeecCcCCCC
Q psy12724 66 QSYTVNIMDEHVLKGNSAVLKCHIPSFVADYVAVESWISDQGEELFVDMTESTDGKYLVLPSG----ELHIRDVGPEDGY 141 (167)
Q Consensus 66 g~y~c~~~~~~v~~G~~a~l~C~~~~~~~~p~p~i~W~k~~~~~l~~~~~~~~~~r~~~~~~g----~L~I~~v~~~D~~ 141 (167)
..|...+.+..+.+|+++.|.|.+.+ .|.|.++|+|++ ..+.. ...|+.+..++ .|.|.+++.+|+
T Consensus 16 p~f~~~p~~~~v~~G~~v~L~C~~~g---~p~p~v~W~k~~-~~~~~-----~~~~~~~~~~~~~~~~L~I~~v~~~D~- 85 (116)
T 2kkq_A 16 PMFIYKPQSKKVLEGDSVKLECQISA---IPPPKLFWKRNN-EMVQF-----NTDRISLYQDNTGRVTLLIKDVNKKDA- 85 (116)
T ss_dssp CCBSSCCCCEEEETTEEEEEEEEBCC---BSCCEEEEEETT-EECCC-----CBTTEEEEECTTCEEEEEEEEECGGGC-
T ss_pred CeEEeCCCcEEEeCCCcEEEEEEEec---cCCCEEEEEECC-EECcC-----CCCeEEEEeCCCCeEEEEECCCCcccC-
Confidence 44666677889999999999999984 588999999997 45431 24667666543 799999999999
Q ss_pred cceEEEeeecC
Q psy12724 142 KSYQCRTKHRL 152 (167)
Q Consensus 142 G~Y~C~a~n~~ 152 (167)
|.|+|.|.|..
T Consensus 86 G~Y~C~a~N~~ 96 (116)
T 2kkq_A 86 GWYTVSAVNEA 96 (116)
T ss_dssp EEEEEEEEETT
T ss_pred EEEEEEEEcCC
Confidence 99999999987
No 168
>3vh8_G Killer cell immunoglobulin-like receptor 3DL1; immunoglobulin fold, natural killer cell receptor, immune SY; HET: NAG; 1.80A {Homo sapiens} PDB: 1im9_D
Probab=99.55 E-value=1.4e-14 Score=115.08 Aligned_cols=122 Identities=12% Similarity=0.121 Sum_probs=75.5
Q ss_pred eeeEEeEEEEEeCCcEEEEeecCCCCCCcceeeEEeeCCCceeee--c-----C-Cc---eE------EEeeeEEEecC-
Q psy12724 13 YEAQVYDVFVIKGNAAVFKCNLPSFVSDHLDVVSWADTDGGQYQI--D-----N-QD---FV------VSQSYTVNIMD- 74 (167)
Q Consensus 13 ~~~~~~~~~v~~G~~~~l~C~a~~~~~~~~~~i~W~k~~~~~~~~--~-----~-~~---~v------~~g~y~c~~~~- 74 (167)
+...+.. .+.+|+++.|.|.+.+.+ +.+.|+|++...... . . .. .+ .+|.|+|.+.+
T Consensus 122 ~~~~~~~-~v~~G~~v~L~C~~~~~~----~~~~w~k~g~~~~~~~~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~a~n~ 196 (316)
T 3vh8_G 122 LLAHPGP-LVKSGERVILQCWSDIMF----EHFFLHKEGISKDPSRLVGQIHDGVSKANFSIGPMMLALAGTYRCYGSVT 196 (316)
T ss_dssp EEEESCS-EEETTCCEEEEEEESSCC----SEEEEEETTCCSCCEEEECEEETTEEEEEEEECSCCGGGCEEEEEEEECT
T ss_pred EEecCCC-ccCCCCeEEEEEcCCCCC----cEEEEEECCCccccceeeeeecCCCceEEEEECCCChhhCceEEEEEecC
Confidence 4444443 388999999999996433 368999986543211 0 0 00 11 27999998642
Q ss_pred -------------------------------eEEEeCCcEEEEeeeCCccCCcceeEEEEeCCCeeeEEeeeecCCceEE
Q psy12724 75 -------------------------------EHVLKGNSAVLKCHIPSFVADYVAVESWISDQGEELFVDMTESTDGKYL 123 (167)
Q Consensus 75 -------------------------------~~v~~G~~a~l~C~~~~~~~~p~p~i~W~k~~~~~l~~~~~~~~~~r~~ 123 (167)
..+.+|+++.|.|.+. .|.+.+.|+|++. .+... ..+..
T Consensus 197 ~g~~~~s~~s~~~~l~V~~~~~~p~i~~~~~~~v~~G~~v~L~C~~~----~~~~~~~W~k~g~-~~~~~-----~~~~~ 266 (316)
T 3vh8_G 197 HTPYQLSAPSDPLDIVVTGPYEKPSLSAQPGPKVQAGESVTLSCSSR----SSYDMYHLSREGG-AHERR-----LPAVR 266 (316)
T ss_dssp TCTTBCCCCCCCEEEEEECSSCCCEEEEESCSCCCTTSCCEEEEEES----SCCSEEEEEETTS-SCCEE-----EECEE
T ss_pred CCCccccCCCCCEEEEecCCCCCCeEEeCCCCeecCCCcEEEEEECC----CCCcEEEEEECCC-cCCCc-----eecee
Confidence 0234699999999996 2678899999984 44221 11111
Q ss_pred Ecc---CCeEEEeecCcCCCCcceEEEeeecC
Q psy12724 124 VLP---SGELHIRDVGPEDGYKSYQCRTKHRL 152 (167)
Q Consensus 124 ~~~---~g~L~I~~v~~~D~~G~Y~C~a~n~~ 152 (167)
... ++.|.|.+++ |+ |.|+|.|.|..
T Consensus 267 ~~~~~~~~~L~i~~v~--D~-G~Y~C~a~n~~ 295 (316)
T 3vh8_G 267 KVNRTFQADFPLGPAT--HG-GTYRCFGSFRH 295 (316)
T ss_dssp CTTSCEEEEEECC--------CEEEEEEEBTT
T ss_pred ccCCceeEEEEcCCcC--CC-EEEEEEeecCC
Confidence 111 2579999999 99 99999999953
No 169
>3bqu_C 3H6 FAB light chain; beta sheet, immune system; 3.00A {Mus musculus}
Probab=99.55 E-value=9.7e-16 Score=116.47 Aligned_cols=131 Identities=18% Similarity=0.268 Sum_probs=76.1
Q ss_pred eeeEEeEEEEEeCCcEEEEeecCCCCCCcceeeEEeeCCC-cee---e------ec--CCc----------eE-------
Q psy12724 13 YEAQVYDVFVIKGNAAVFKCNLPSFVSDHLDVVSWADTDG-GQY---Q------ID--NQD----------FV------- 63 (167)
Q Consensus 13 ~~~~~~~~~v~~G~~~~l~C~a~~~~~~~~~~i~W~k~~~-~~~---~------~~--~~~----------~v------- 63 (167)
+...|.++.+.+|+++.|.|.+.+.+. +.+.|+|++. ..+ . .. ..| .+
T Consensus 26 v~~~p~~~~v~~G~~v~L~C~~~~~~~---~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~ 102 (233)
T 3bqu_C 26 VTQSPASLSMSIGEKVTIRCITSTDID---DDMNWYQQKPGEPPRLLISDGNTLRPGVPSRFSSSGYGTDFVFTIENMLS 102 (233)
T ss_dssp EEEECSBC-------CCEEEEEEEEES---SCEEEEEECTTSCCEEEECTTSCBCTTSCTTCCCCEEEEEEEEC-----C
T ss_pred EEEcCCeEEEecCCCEEEEEecCCcCC---CeEEEEEECCCCCcEEEEEcCCccCCCCCccEEeeccCCEEEEEECCCCH
Confidence 445578889999999999999987764 3699988542 111 0 00 001 01
Q ss_pred -EEeeeEEEecCe----------------------EE-------EeCCcEEEEeeeCCccCCcce-eEEEEeCCCeeeEE
Q psy12724 64 -VSQSYTVNIMDE----------------------HV-------LKGNSAVLKCHIPSFVADYVA-VESWISDQGEELFV 112 (167)
Q Consensus 64 -~~g~y~c~~~~~----------------------~v-------~~G~~a~l~C~~~~~~~~p~p-~i~W~k~~~~~l~~ 112 (167)
.+|.|.|.+.+. .+ .+|+++.|.|.+.+. .|.| .++|+||+ ..+.+
T Consensus 103 ~D~G~Y~C~~~~~~~~~~~~~~~l~V~~~~~~p~v~~~~~~~~~~~g~~v~L~C~~~g~--~p~~~~v~W~k~g-~~~~~ 179 (233)
T 3bqu_C 103 EDVADYYCLQSDNLPYTFGGGTNLEIKRADAAPTVSIFPPSSEQLTSGGASVVCFLNNF--YPKDINVKWKIDG-SERQN 179 (233)
T ss_dssp CCCSEEEEEECSSSSCCBCCCCBC---CCCBCCEEEEECCCHHHHHTTEEEEEEEEEEE--BSSCEEEEEEEC------C
T ss_pred HHCEEEEEEEecCCceeecCCEEEEEeCCCCCCEEEEeCCCHHhhcCCceEEEEEEccc--cCCceEEEEEECC-eeCCC
Confidence 279999987430 11 138999999999753 2443 69999997 45432
Q ss_pred e-e-----eecCCceEEEccCCeEEEeecCcCCCCcceEEEeeecC
Q psy12724 113 D-M-----TESTDGKYLVLPSGELHIRDVGPEDGYKSYQCRTKHRL 152 (167)
Q Consensus 113 ~-~-----~~~~~~r~~~~~~g~L~I~~v~~~D~~G~Y~C~a~n~~ 152 (167)
. . ....++.|.. ...|.|.+++.+|+ |.|+|.|.|..
T Consensus 180 ~~~~~~~~~~~~~~~~~~--~s~L~i~~~~~~d~-g~Y~C~a~n~~ 222 (233)
T 3bqu_C 180 GVLNSWTDQDSKDSTYSM--SSTLTLTKDEYERH-NSYTCEATHKT 222 (233)
T ss_dssp CEEEEECCCCTTTCCEEE--EEEEEEEHHHHHTC-CCEEEEEEEC-
T ss_pred CceEecCCccCCCCCEEE--EEEEEECHHHhCCC-CCEEEEEEeCC
Confidence 1 0 0011222322 23699999999999 99999999975
No 170
>3irg_B Obscurin-like protein 1; IG-like, titin, OBSL1, complex, alternative splicing, ATP-binding, calcium, calmodulin-binding, cardiomyopathy; 1.30A {Homo sapiens} PDB: 3knb_B 2wp3_O* 2wwm_C 2wwk_O
Probab=99.55 E-value=2e-14 Score=97.04 Aligned_cols=75 Identities=21% Similarity=0.350 Sum_probs=61.8
Q ss_pred eeEEEecCeEEEeCCcEEEEeeeCCccCCcceeEEEEeCCCeeeEEeeeecCCceEEEccCC---eEEEeecCcCCCCcc
Q psy12724 67 SYTVNIMDEHVLKGNSAVLKCHIPSFVADYVAVESWISDQGEELFVDMTESTDGKYLVLPSG---ELHIRDVGPEDGYKS 143 (167)
Q Consensus 67 ~y~c~~~~~~v~~G~~a~l~C~~~~~~~~p~p~i~W~k~~~~~l~~~~~~~~~~r~~~~~~g---~L~I~~v~~~D~~G~ 143 (167)
.+.-.+.+..+.+|+++.|.|.+. +.|.|.++|+|++ ..+. ...++.+..++ .|.|.+++.+|+ |.
T Consensus 15 ~~~~~~~~~~v~~G~~v~l~C~~~---g~p~p~i~W~~~~-~~~~------~~~~~~~~~~~~~~~L~i~~~~~~D~-G~ 83 (107)
T 3irg_B 15 CFLRFPRPVRVVSGAEAELKCVVL---GEPPPVVVWEKGG-QQLA------ASERLSFPADGAEHGLLLTAALPTDA-GV 83 (107)
T ss_dssp EEEECCCCEEEETTSCEEEEEEEE---EESCCEEEEEETT-EECC------CCSSEECCEETTEEEEEESSCCGGGC-EE
T ss_pred eeEcCCccEEEeCCCeEEEEEEEe---ecCCCEEEEEECC-eECC------CCCcEEEEeCCCEEEEEEccCCHHhC-EE
Confidence 344455677889999999999997 4588899999987 4553 35677777777 899999999999 99
Q ss_pred eEEEeeecC
Q psy12724 144 YQCRTKHRL 152 (167)
Q Consensus 144 Y~C~a~n~~ 152 (167)
|+|.|.|..
T Consensus 84 Y~C~a~n~~ 92 (107)
T 3irg_B 84 YVCRARNAA 92 (107)
T ss_dssp EEEEEEETT
T ss_pred EEEEEEcCC
Confidence 999999986
No 171
>2bk8_A Connectin, M1, titin heart isoform N2-B; IG domain, M-BAND, structural protein, muscle, antibo; 1.69A {Homo sapiens}
Probab=99.55 E-value=2.2e-14 Score=95.57 Aligned_cols=82 Identities=21% Similarity=0.369 Sum_probs=62.9
Q ss_pred ecCeEEEeCCcEEEEeeeCCccCCcceeEEEEeCCCeeeEEeeeecCCceEEE-ccCC--eEEEeecCcCCCCcceEEEe
Q psy12724 72 IMDEHVLKGNSAVLKCHIPSFVADYVAVESWISDQGEELFVDMTESTDGKYLV-LPSG--ELHIRDVGPEDGYKSYQCRT 148 (167)
Q Consensus 72 ~~~~~v~~G~~a~l~C~~~~~~~~p~p~i~W~k~~~~~l~~~~~~~~~~r~~~-~~~g--~L~I~~v~~~D~~G~Y~C~a 148 (167)
+.+..+.+|+++.|.|.+.+. +|.|.++|+|++ ..+. ...++.+ ..++ .|.|.+++.+|+ |.|+|.|
T Consensus 8 ~~~~~v~~G~~v~l~C~~~g~--~p~~~v~W~~~~-~~~~------~~~~~~~~~~~~~~~L~i~~v~~~D~-G~Y~C~a 77 (97)
T 2bk8_A 8 IMHAVGEEGGHVKYVCKIENY--DQSTQVTWYFGV-RQLE------NSEKYEITYEDGVAILYVKDITKLDD-GTYRCKV 77 (97)
T ss_dssp CCCEEECTTCCEEEEEEEESC--CTTCEEEEEETT-EECC------SSSSEEEEEETTEEEEEECSCCGGGC-EEEEEEE
T ss_pred CcCEEEcCCCcEEEEEEEecc--CCCCEEEEEECC-EECc------CCCCEEEEEcCCeEEEEEecCChhhC-eEEEEEE
Confidence 456788999999999999731 388999999997 4542 3456655 3456 899999999999 9999999
Q ss_pred eecC---cceEEEeeeCC
Q psy12724 149 KHRL---TGETRLSATKG 163 (167)
Q Consensus 149 ~n~~---~~~~~l~~~~~ 163 (167)
.|.. ...+.|.+.+.
T Consensus 78 ~n~~g~~~~~~~l~V~~~ 95 (97)
T 2bk8_A 78 VNDYGEDSSYAELFVKGV 95 (97)
T ss_dssp ECSSCEEEEEEEEEETTT
T ss_pred ECCCCeEeEEEEEEEEec
Confidence 9987 33456665543
No 172
>1nfd_E H57 FAB; complex (immunoreceptor-immunoglobulin), complex (immunorece immunoglobulin) complex; HET: NAG NDG; 2.80A {Mus musculus} SCOP: b.1.1.1 b.1.1.2
Probab=99.55 E-value=1.8e-15 Score=113.39 Aligned_cols=126 Identities=16% Similarity=0.228 Sum_probs=85.2
Q ss_pred EeEEEEEeCCcEEEEeecCCCCCCcceeeEEeeCC-Cceee--e-------c--CCc----------eE--------EEe
Q psy12724 17 VYDVFVIKGNAAVFKCNLPSFVSDHLDVVSWADTD-GGQYQ--I-------D--NQD----------FV--------VSQ 66 (167)
Q Consensus 17 ~~~~~v~~G~~~~l~C~a~~~~~~~~~~i~W~k~~-~~~~~--~-------~--~~~----------~v--------~~g 66 (167)
|.++.+.+|+++.|.|.+.+.+.+ .+.|+|++ +..+. . . ..| .+ .+|
T Consensus 6 p~~~~v~~G~~v~L~C~~~~~~~~---~v~W~k~~~g~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~D~G 82 (212)
T 1nfd_E 6 PSSASVTVGETVKITCSGDQLPKN---FAYWFQQKSDKNILLLIYMDNKRPSGIPERFSGSTSGTTATLTISGAQPEDEA 82 (212)
T ss_dssp CSEEEEETTSCCCEEEEETTGGGS---CCEEEEECTTCCEEEEEBTTTBCCTTSCTTEEEEEETTEEEEEETTCCGGGCS
T ss_pred CCeEEEeCCCcEEEEEecCCCCCC---eEEEEEECCCCCcEEEEEeccccCCCccccEEEEeeCCEEEEEECcCCcccCE
Confidence 778899999999999998877643 69998853 22220 0 0 011 11 279
Q ss_pred eeEEEecC-------------eEE-------------------EeCCcEEEEeeeCCccCCcc-eeEEEEeCCCeeeEEe
Q psy12724 67 SYTVNIMD-------------EHV-------------------LKGNSAVLKCHIPSFVADYV-AVESWISDQGEELFVD 113 (167)
Q Consensus 67 ~y~c~~~~-------------~~v-------------------~~G~~a~l~C~~~~~~~~p~-p~i~W~k~~~~~l~~~ 113 (167)
.|.|.+.+ ..| .+|+++.|.|.+.+. .|. |.++|+||+ ..+...
T Consensus 83 ~Y~C~~~n~~~~~~~~~~~~~l~V~~~~~~~p~v~~~~~~~~~~~g~~v~L~C~~~g~--~p~~~~v~W~k~g-~~~~~~ 159 (212)
T 1nfd_E 83 AYYCLSSYGDNNDLVFGSGTQLTVLRGPKSSPKVTVFPPSPEELRTNKATLVCLVNDF--YPGSATVTWKANG-ATINDG 159 (212)
T ss_dssp EEEEEEEETTTTEEEECCCEEEEEECCCCBCCEEECCCCCHHHHHTTEECCCEEEEEE--BSSCCEEEEEETT-EEECSS
T ss_pred EEEEEEEcccCcccccCCceEEEEccCCCCCCEEEeeCCchHhccCCceEEEEEEEee--ECCccEEEEEECC-eEcCCC
Confidence 99998862 011 248899999999753 244 789999997 455321
Q ss_pred ee-----ecCCceEEEccCCeEEEeecCcCCCCcceEEEeeecC
Q psy12724 114 MT-----ESTDGKYLVLPSGELHIRDVGPEDGYKSYQCRTKHRL 152 (167)
Q Consensus 114 ~~-----~~~~~r~~~~~~g~L~I~~v~~~D~~G~Y~C~a~n~~ 152 (167)
.. ...++ |.. .+.|.|.+++.+|+ |.|+|.|.|..
T Consensus 160 ~~~~~~~~~~~~-~~~--~s~L~i~~~~~~d~-G~Y~C~a~n~~ 199 (212)
T 1nfd_E 160 VKTTKPSKQGQN-YMT--SSYLSLTADQWKSH-NRVSCQVTHEG 199 (212)
T ss_dssp CBCCCCBCSSSC-EEE--EEBCCEEHHHHHTC-SCEEEEEECTT
T ss_pred eecCCceecCCC-ceE--EEEEEEchhhcCCC-CeEEEEEEeCC
Confidence 10 00122 322 25699999999998 99999999986
No 173
>2lvc_A Obscurin-like protein 1; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative, structural prote; NMR {Homo sapiens}
Probab=99.55 E-value=4.1e-15 Score=99.58 Aligned_cols=70 Identities=19% Similarity=0.363 Sum_probs=54.9
Q ss_pred EEeCCcEEEEeeeCCccCCcceeEEEEeCCCeeeEEeeeecCCceEEEccCC---eEEEeecCcCCCCcceEEEeeecCc
Q psy12724 77 VLKGNSAVLKCHIPSFVADYVAVESWISDQGEELFVDMTESTDGKYLVLPSG---ELHIRDVGPEDGYKSYQCRTKHRLT 153 (167)
Q Consensus 77 v~~G~~a~l~C~~~~~~~~p~p~i~W~k~~~~~l~~~~~~~~~~r~~~~~~g---~L~I~~v~~~D~~G~Y~C~a~n~~~ 153 (167)
+.+|+++.|.|.+. .|.|.++|+||+ ..+. .+.++.+..+| .|.|.+++.+|+ |.|+|.|.|..
T Consensus 18 ~~~g~~v~l~C~v~----~p~~~v~W~k~g-~~i~------~~~~~~i~~~~~~~~L~I~~v~~~D~-G~Y~C~a~n~~- 84 (91)
T 2lvc_A 18 AITSECVMLACEVD----REDAPVRWYKDG-QEVE------ESDFVVLENEGPHRRLVLPATQPSDG-GEFQCVAGDEC- 84 (91)
T ss_dssp CCTTCCEEEEEECS----CTTSCCEEEETT-SCCC------CCSSCEEEEETTEEEEEESSCCGGGC-SEEEEECSSCE-
T ss_pred EECCCcEEEEEEEC----CCCcEEEEEECC-EEee------eeeeeeEEecCCeEEEEeCCCChhhc-EEEEEEEcceE-
Confidence 45799999999984 277789999998 5664 34566666555 699999999999 99999999863
Q ss_pred ceEEEe
Q psy12724 154 GETRLS 159 (167)
Q Consensus 154 ~~~~l~ 159 (167)
..+.|+
T Consensus 85 ~~~~lt 90 (91)
T 2lvc_A 85 AYFTVT 90 (91)
T ss_dssp EEEEEE
T ss_pred EEEEEE
Confidence 445554
No 174
>1b6u_A KIR2DL3, P58 killer cell inhibitory receptor; natural killer cell, HLA, major histocompatibility complex class I (MHC class I); 3.00A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4
Probab=99.55 E-value=2e-14 Score=112.99 Aligned_cols=121 Identities=14% Similarity=0.093 Sum_probs=81.6
Q ss_pred ceeeEEeEEEEEeCCcEEEEeecCCCCCCcceeeEEeeCCCceeee-------cC-Cc--eE-------EEeeeEEEecC
Q psy12724 12 YYEAQVYDVFVIKGNAAVFKCNLPSFVSDHLDVVSWADTDGGQYQI-------DN-QD--FV-------VSQSYTVNIMD 74 (167)
Q Consensus 12 ~~~~~~~~~~v~~G~~~~l~C~a~~~~~~~~~~i~W~k~~~~~~~~-------~~-~~--~v-------~~g~y~c~~~~ 74 (167)
.+...|. ..|.+|+++.|.|.+.+. . +.+.|+|++...... .. .. .. .+|.|+|.+.+
T Consensus 9 ~i~~~P~-~~V~~G~~VtL~C~~~~~-~---~~~~W~k~g~~~~~~~~~~~~~~~~~~~~L~I~~v~~~DsG~Y~C~a~~ 83 (257)
T 1b6u_A 9 SLLAHPG-PLVKSEETVILQCWSDVR-F---QHFLLHREGKFKDTLHLIGEHHDGVSKANFSIGPMMQDLAGTYRCYGSV 83 (257)
T ss_dssp EECCBSC-SEEESSCCEEEEEEESSC-C---SEEEEEEESTTCEEEEEECBCCTTCEEEEEEECSCCTTTCEEEEEEEEC
T ss_pred EEEEcCC-CEecCCCCEEEEEecCCC-C---cEEEEEECCCCCCcceeeeeccCCCceEEEEeecCCcccCEEEEEeEec
Confidence 3455565 678999999999999743 2 469999986543210 01 01 11 27999998631
Q ss_pred --------------------------------eEEEeCCcEEEEeeeCCccCCcceeEEEEeCCCeeeEEeeeecCCceE
Q psy12724 75 --------------------------------EHVLKGNSAVLKCHIPSFVADYVAVESWISDQGEELFVDMTESTDGKY 122 (167)
Q Consensus 75 --------------------------------~~v~~G~~a~l~C~~~~~~~~p~p~i~W~k~~~~~l~~~~~~~~~~r~ 122 (167)
..+.+|++++|.|.+.+ +.+.+.|+||+. .+... .++
T Consensus 84 ~~~~~~~s~~S~~~~L~V~~~~~~P~l~~~p~~~V~~G~~vtL~C~~~~----~~~~~~w~k~g~-~~~~~------~~~ 152 (257)
T 1b6u_A 84 THSPYQLSAPSDPLDIVITGLYEKPSLSAQPGPTVLAGESVTLSCSSRS----SYDMYHLSREGE-AHERR------FSA 152 (257)
T ss_dssp SSCTTSCCCCCCCEEEEEECSSCCCEEECSSCTTCBTTCEEEEEEECSS----CCSEEEEEETTS-SCEEC------CBC
T ss_pred cCCCccccccCCCEEEecccCCCCcceEccCCCccCCCCEEEEEEeCCC----CCcEEEEEECCc-ccCcc------ccc
Confidence 01357999999999874 236789999984 54321 111
Q ss_pred EEc----cCCeEEEeecCcCCCCcceEEEeeec
Q psy12724 123 LVL----PSGELHIRDVGPEDGYKSYQCRTKHR 151 (167)
Q Consensus 123 ~~~----~~g~L~I~~v~~~D~~G~Y~C~a~n~ 151 (167)
... .++.|.|.+++ |+ |.|+|.|.|.
T Consensus 153 ~~~~~~~~~~~l~I~~v~--D~-G~Y~C~a~~~ 182 (257)
T 1b6u_A 153 GPKVNGTFQADFPLGPAT--HG-GTYRCFGSFR 182 (257)
T ss_dssp BCCSSSCCBEEEEEEECC--SC-EEEEEEEECS
T ss_pred ccccCCceeEEEEecccc--cC-EEEEEEEEcC
Confidence 111 25689999999 98 9999999974
No 175
>2xzc_L FAB A.17 light chain; immune system; HET: XOP; 1.36A {Homo sapiens} PDB: 2xza_L* 3kdm_L* 3nps_C 1dn0_A 1qlr_A* 2v7n_A 3eo0_A 3eo1_A 2agj_L* 2fx7_L 1tzg_L 2fx8_L 2fx9_L* 1u6a_L 3hi1_L* 3kym_A 3kyk_L 3qwo_L* 3ixt_L* 3qeg_L ...
Probab=99.55 E-value=7.2e-14 Score=105.04 Aligned_cols=129 Identities=22% Similarity=0.290 Sum_probs=82.8
Q ss_pred EeEEEEEeCCcEEEEeecCCCCCCcceeeEEeeCC-Cceee--e-------c--CCc----------eE--------EEe
Q psy12724 17 VYDVFVIKGNAAVFKCNLPSFVSDHLDVVSWADTD-GGQYQ--I-------D--NQD----------FV--------VSQ 66 (167)
Q Consensus 17 ~~~~~v~~G~~~~l~C~a~~~~~~~~~~i~W~k~~-~~~~~--~-------~--~~~----------~v--------~~g 66 (167)
|.++.+.+|+++.|.|.+.+.+.+ .+.+.|+|++ +..+. . . ..| .+ .+|
T Consensus 7 p~~~~v~~G~~v~L~C~v~~~~~~-~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~D~G 85 (216)
T 2xzc_L 7 PPSVSAAPGQKVTISCSGSSSNIG-NNYVSWYQQLPGTAPKLLIYDNNKRPSGIPDRFSGSKSGTSATLGITGLQTGDEA 85 (216)
T ss_dssp CSEEEECTTCCEEEEEECCTTTGG-GSCCEEEEECTTSCCEEEEBTTTBCCTTCCTTEEEEEETTEEEEEECSCCGGGCE
T ss_pred CCcEEecCCCeEEEEEEeecCCCC-CCeEEEEEeCCCCCcEEEEEecCccCCCCCCceEEeccCCEEEEEECCCCcccCE
Confidence 778999999999999995443311 2479999854 21110 0 0 001 11 279
Q ss_pred eeEEEecCe------------E---------E---------EeCCcEEEEeeeCCccCCcce-eEEEEeCCCeeeEEe-e
Q psy12724 67 SYTVNIMDE------------H---------V---------LKGNSAVLKCHIPSFVADYVA-VESWISDQGEELFVD-M 114 (167)
Q Consensus 67 ~y~c~~~~~------------~---------v---------~~G~~a~l~C~~~~~~~~p~p-~i~W~k~~~~~l~~~-~ 114 (167)
.|.|.+.+. . + ..|+++.|.|.+.+. .|.| .++|+||+ ..+... .
T Consensus 86 ~Y~C~~~~~~~~~~~~~~~~l~V~~~~~~P~v~~~~~~~~~~~g~~v~L~C~~~g~--~P~~~~v~W~k~g-~~~~~~~~ 162 (216)
T 2xzc_L 86 DYYCGTWDSSLNPVFGGGTKLEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNF--YPREAKVQWKVDN-ALQSGNSQ 162 (216)
T ss_dssp EEEEEEECTTSCEEEBCCEEEEECCCCBCCEEEEECCCHHHHHTTEEEEEEEEEEE--BSSCCEEEEEETT-EECCSSEE
T ss_pred EEEEEEEeCCCcceECCCEEEEEcCCCCCCceEEeCCChhhccCCcEEEEEEEEeE--cCCceEEEEEECC-eecCCCee
Confidence 999987431 0 1 138899999999753 3554 89999997 454211 0
Q ss_pred -----eecCCceEEEccCCeEEEeecCcCCCCcceEEEeeecC
Q psy12724 115 -----TESTDGKYLVLPSGELHIRDVGPEDGYKSYQCRTKHRL 152 (167)
Q Consensus 115 -----~~~~~~r~~~~~~g~L~I~~v~~~D~~G~Y~C~a~n~~ 152 (167)
....++.|.+. ..|.|.+++.+|+ |.|+|.|.|..
T Consensus 163 ~~~~~~~~~~g~~~~~--s~L~i~~~~~~d~-g~Y~C~a~n~~ 202 (216)
T 2xzc_L 163 ESVTEQDSKDSTYSLS--STLTLSKADYEKH-KVYACEVTHQG 202 (216)
T ss_dssp EEECCCCTTTCCEEEE--EEEEEEHHHHTTC-CEEEEEEECTT
T ss_pred EecCcccCCCCCEEEE--EEEEECHHHhCCC-CcEEEEEEcCC
Confidence 00111222221 2699999999998 99999999986
No 176
>4fom_A Poliovirus receptor-related protein 3; immunoglobulin-like domain, IG domain, cell adhesion; HET: NAG BMA MAN FUC; 3.93A {Homo sapiens}
Probab=99.55 E-value=1.2e-14 Score=114.66 Aligned_cols=126 Identities=17% Similarity=0.255 Sum_probs=83.2
Q ss_pred EEEEEeCCcEEEEeecCCCCCCcceeeEEeeCCCceeee--------------c-CCc-----------eE--------E
Q psy12724 19 DVFVIKGNAAVFKCNLPSFVSDHLDVVSWADTDGGQYQI--------------D-NQD-----------FV--------V 64 (167)
Q Consensus 19 ~~~v~~G~~~~l~C~a~~~~~~~~~~i~W~k~~~~~~~~--------------~-~~~-----------~v--------~ 64 (167)
++.|++|+++.|.|.+.+... .+.|+|+|+++..... . ..| .+ .
T Consensus 8 ~vtv~~G~~v~L~C~v~~~~~--~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~sL~I~~v~~~D 85 (308)
T 4fom_A 8 HVTAVWGKNVSLKCLIEVNET--ITQISWEKIHGKSSQTVAVHHPQYGFSVQGEYQGRVLFKNYSLNDATITLHNIGFSD 85 (308)
T ss_dssp SCEEETTSCEEECCBCCCSSC--EEEEEEEEESSSCEEEEEEECSSSCEEECTTTTTTEEESCCSSSBCCEEECSCCGGG
T ss_pred EeEEEcCCcEEEEEEecCCCC--CcEEEEEECCCCCCceEEEecCCCCceecCcccceEEeeccCCCceEEEEccCCHHH
Confidence 578999999999999875443 3579999875432100 0 000 11 2
Q ss_pred EeeeEEEecC----------------------------eEEEeCCcEEEEeeeCCccCCcceeEEEEeCCCeeeEEeeee
Q psy12724 65 SQSYTVNIMD----------------------------EHVLKGNSAVLKCHIPSFVADYVAVESWISDQGEELFVDMTE 116 (167)
Q Consensus 65 ~g~y~c~~~~----------------------------~~v~~G~~a~l~C~~~~~~~~p~p~i~W~k~~~~~l~~~~~~ 116 (167)
+|.|+|.+.+ ..+..|+++.|.|.+.+ +.|.|.++|+|++. .+......
T Consensus 86 ~G~Y~C~a~n~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~l~C~~~~--g~P~~~i~W~~~~~-~~~~~~~~ 162 (308)
T 4fom_A 86 SGKYICKAVTFPLGNAQSSTTVTVLVEPTVSLIKGPDSLIDGGNETVAAICIAAT--GKPVAHIDWEGDLG-EMESTTTS 162 (308)
T ss_dssp CEEEEEEEEETTTEEEEEEEEEEEEBCCEEEEEECSSCCCTTCSCEEEEEEEEEE--EBSCCEEEECCCSS-BCCEEEEE
T ss_pred CEEEEEEEeeCCCcceeeeeEEEeeeccccccccccceeEEcCCceEEEEEEecC--CcCCceEEEEECCc-ccccccce
Confidence 6999998732 01125788999998642 56999999999984 54321100
Q ss_pred cCCceEEEccCCeEEEeecCcCCCCcceEEEeeecC
Q psy12724 117 STDGKYLVLPSGELHIRDVGPEDGYKSYQCRTKHRL 152 (167)
Q Consensus 117 ~~~~r~~~~~~g~L~I~~v~~~D~~G~Y~C~a~n~~ 152 (167)
...+.+.. .+.|.|.+++.+|+ |.|+|.|.|..
T Consensus 163 ~~~~~~~~--~s~l~i~~~~~~d~-g~Y~C~a~n~~ 195 (308)
T 4fom_A 163 FPNETATI--ISQYKLFPTRFARG-RRITCVVKHPA 195 (308)
T ss_dssp CTTSCEEE--EEEEEECCCGGGTT-CEEEEEEECTT
T ss_pred eeeecccc--cccceEEeeeecCC-ccEEEEEEccC
Confidence 11111211 24699999999999 99999999975
No 177
>2wng_A Tyrosine-protein phosphatase non-receptor type substrate 1; signal regulatory protein alpha, immunoglobulin superfamily, phosphoprotein; HET: NAG; 2.49A {Homo sapiens}
Probab=99.54 E-value=3.2e-14 Score=113.32 Aligned_cols=131 Identities=13% Similarity=0.179 Sum_probs=88.5
Q ss_pred ceeeEEeEEEEEeCCcEEEEeecCCC-CCCcceeeEEeeCCCce---eee-------------------cCCceE-----
Q psy12724 12 YYEAQVYDVFVIKGNAAVFKCNLPSF-VSDHLDVVSWADTDGGQ---YQI-------------------DNQDFV----- 63 (167)
Q Consensus 12 ~~~~~~~~~~v~~G~~~~l~C~a~~~-~~~~~~~i~W~k~~~~~---~~~-------------------~~~~~v----- 63 (167)
.+...++++.+.+|+++.|.|.+.+. |. +.|.|+|++... +.. .....+
T Consensus 5 ~v~~~p~~~~v~~G~~v~L~C~~~~~~p~---~~v~W~k~~~~~~~~i~~~~~~~~~r~~~~~~~~~~~~~~~~L~I~~v 81 (327)
T 2wng_A 5 QVIQPDKSVSVAAGESAILHCTVTSLIPV---GPIQWFRGAGPARELIYNQKEGHFPRVTTVSESTKRENMDFSISISNI 81 (327)
T ss_dssp CEECCCSEEEEETTSCEEECCEESCCCSC---CCEEEEESCSTTCEEEEETTSSCCTTEEECC---CTTCCBCCEEECSC
T ss_pred EEEcCCCceEEecCCcEEEEEEccCcCCC---ceEEEEECCCCCceEEEEcCCCCcceeeeecccccccCceeEEEEccC
Confidence 35677889999999999999999887 43 479999986431 111 000011
Q ss_pred ---EEeeeEEEecCe-------------------------------EEEeCCcEEEEeeeCCccCCcce--eEEEEeCCC
Q psy12724 64 ---VSQSYTVNIMDE-------------------------------HVLKGNSAVLKCHIPSFVADYVA--VESWISDQG 107 (167)
Q Consensus 64 ---~~g~y~c~~~~~-------------------------------~v~~G~~a~l~C~~~~~~~~p~p--~i~W~k~~~ 107 (167)
.+|.|+|.+.+. .+.+|+++.|.|.+.+. |.| .++|+||+
T Consensus 82 ~~~D~G~Y~C~a~n~~~~~~~~~~~~~~~l~V~~~p~~p~i~~~~~~~~~g~~~~l~C~~~g~---p~~~~~v~W~k~g- 157 (327)
T 2wng_A 82 TPADAGTYYCVKFRKGSPDTEFKSGAGTELSVRAKPSAPVVSGPAARATPQHTVSFTCESHGF---SPRDITLKWFKNG- 157 (327)
T ss_dssp CGGGCEEEEEEEEESSTTCEEEEECCCEEEEEEBCCCCCEEECCSSCBCTTCEEEEEEEEEEE---BSSCCEEEEEETT-
T ss_pred ccccCeEEEEEeecCCCcceeEeecCcEEEEEEecCCCceeeccccccCCCCEEEEEEEEeCc---cCCCcEEEEEECC-
Confidence 279999986321 12469999999999854 544 89999997
Q ss_pred eeeEEee---e-ecCCceEEEccCCeEEEeecCcCCCCcceEEEeeecC
Q psy12724 108 EELFVDM---T-ESTDGKYLVLPSGELHIRDVGPEDGYKSYQCRTKHRL 152 (167)
Q Consensus 108 ~~l~~~~---~-~~~~~r~~~~~~g~L~I~~v~~~D~~G~Y~C~a~n~~ 152 (167)
..+.... . ...++.|.+ ...|.|.....+|+ |.|+|.|.|..
T Consensus 158 ~~l~~~~~~~~~~~~~~~~~~--~s~L~i~~~~~d~~-g~Y~C~a~n~~ 203 (327)
T 2wng_A 158 NELSDFQTNVDPVGESVSYSI--HSTAKVVLTREDVH-SQVICEVAHVT 203 (327)
T ss_dssp EECCCEEEEEECSSCCSCEEE--EEEEEEECCTTGGG-CEEEEEEECTT
T ss_pred EEccccccccccccCCCceEE--EEEEEEechhcCcC-ceEEEEEeccc
Confidence 5553211 0 001122322 23588888888888 99999999975
No 178
>3pv7_A B7-H6, IG-like domain-containing protein DKFZP686O24166/DKFZP686I21167; NK cell receptor, receptor-ligand complex, immune system; HET: NAG; 2.00A {Homo sapiens} PDB: 3pv6_A*
Probab=99.54 E-value=1.1e-14 Score=111.72 Aligned_cols=132 Identities=14% Similarity=0.126 Sum_probs=79.6
Q ss_pred eEEeEEEEEeCCcEEEEeecCCCCCCc--ceeeEEeeCCCcee-----e----------ecCCc-----------eE---
Q psy12724 15 AQVYDVFVIKGNAAVFKCNLPSFVSDH--LDVVSWADTDGGQY-----Q----------IDNQD-----------FV--- 63 (167)
Q Consensus 15 ~~~~~~~v~~G~~~~l~C~a~~~~~~~--~~~i~W~k~~~~~~-----~----------~~~~~-----------~v--- 63 (167)
..+.++.+.+|+++.|.|.+.+.+.+. ...+.|+|++.... . .+..+ .+
T Consensus 8 ~~p~~~~v~~G~~v~L~C~~~g~p~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sL~I~ 87 (248)
T 3pv7_A 8 MAGGTQITPLNDNVTIFCNIFYSQPLNITSMGITWFWKSLTFDKEVKVFEFFGDHQEAFRPGAIVSPWRLKSGDASLRLP 87 (248)
T ss_dssp STTSEEEEETTSCEEECCEEEESSCCCTTSCEEEEEEECSSCCCEEEEEEEESSCEEESSTTCBCCHHHHTTTBCCEEES
T ss_pred eCCCCeEEeCCCCEEEeeEEecCCCcCCCceEEEEEEEcCCCCcceEEEEecCCcccccCCceEEEeccCCCCcEEEEeC
Confidence 345677899999999999997665420 12499998643211 0 00000 01
Q ss_pred -----EEeeeEEEecC------------------------eEEEeCCcEEEEeeeCCccCCcce-eEEEEeCCCeeeEE-
Q psy12724 64 -----VSQSYTVNIMD------------------------EHVLKGNSAVLKCHIPSFVADYVA-VESWISDQGEELFV- 112 (167)
Q Consensus 64 -----~~g~y~c~~~~------------------------~~v~~G~~a~l~C~~~~~~~~p~p-~i~W~k~~~~~l~~- 112 (167)
.+|.|+|.+.+ ..+..|+.+.|.|.+.+ ..|.| .++|+||+. .+..
T Consensus 88 ~v~~~D~G~Y~C~~~~~~~~~~~~~~L~V~~~P~v~~~~~~~~~~~~~~~L~C~~~g--~~P~pi~v~W~k~g~-~l~~~ 164 (248)
T 3pv7_A 88 GIQLEEAGEYRCEVVVTPLKAQGTVQLEVVASPASRLLLDQVGMKENEDKYMCESSG--FYPEAINITWEKQTQ-KFPHP 164 (248)
T ss_dssp SCCGGGCEEEEEEEEETTEEEEEEEEEEEEBCCEEEEECC--------CEEEEEEEE--EBSSCCEEEEEEECS-SSCSC
T ss_pred CCCHHHCeEEEEEEEeCCccceeEEEEEEecCCceEEecCCccccCCCcEEEEEEcc--EECCCeEEEEEECCc-cCCCc
Confidence 27999998732 11245888999999975 14888 999999973 2210
Q ss_pred ----------eeeecCCceEEEccCCeEEEeecCcCCCCcceEEEeeecC
Q psy12724 113 ----------DMTESTDGKYLVLPSGELHIRDVGPEDGYKSYQCRTKHRL 152 (167)
Q Consensus 113 ----------~~~~~~~~r~~~~~~g~L~I~~v~~~D~~G~Y~C~a~n~~ 152 (167)
......++.|.+ ...|.|.....+|. |.|+|.|.|..
T Consensus 165 ~~~~~~~~~~~~~~~~~~~~~~--~s~L~i~~~~~~d~-g~YtC~a~n~~ 211 (248)
T 3pv7_A 165 IEISEDVITGPTIKNMDGTFNV--TSCLKLNSSQEDPG-TVYQCVVRHAS 211 (248)
T ss_dssp EEECTTEEEEEEEECTTSCEEE--EEEEECC--CCCTT-CEEEEEEECTT
T ss_pred cccccceeecccEECCCCCEEE--EEEEEEcCccccCC-CEEEEEEECCC
Confidence 000112333333 24689999999998 99999999976
No 179
>2cqv_A MLCK, myosin light chain kinase, smooth muscle and non- muscle isozymes; IG fold, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.1.1.4
Probab=99.54 E-value=1.7e-14 Score=99.00 Aligned_cols=79 Identities=16% Similarity=0.205 Sum_probs=61.6
Q ss_pred EecCeEEEeCCcEEEEeeeCCccCCcceeEEEEeCCCeeeEEeeeecCCceEEEcc---CCeEEEeecCcCCCCcceEEE
Q psy12724 71 NIMDEHVLKGNSAVLKCHIPSFVADYVAVESWISDQGEELFVDMTESTDGKYLVLP---SGELHIRDVGPEDGYKSYQCR 147 (167)
Q Consensus 71 ~~~~~~v~~G~~a~l~C~~~~~~~~p~p~i~W~k~~~~~l~~~~~~~~~~r~~~~~---~g~L~I~~v~~~D~~G~Y~C~ 147 (167)
.+.+..+.+|+++.|.|.+. ++|.|.++|+|++ ..+. ...|+.+.. ++.|.|.+++.+|+ |.|+|.
T Consensus 13 ~~~~~~v~~G~~v~l~C~~~---g~p~p~i~W~k~~-~~~~------~~~~~~~~~~~~~~~L~I~~v~~~D~-G~Y~C~ 81 (114)
T 2cqv_A 13 FPEDQKVRAGESVELFGKVT---GTQPITCTWMKFR-KQIQ------ESEHMKVENSENGSKLTILAARQEHC-GCYTLL 81 (114)
T ss_dssp CCCSEEEETTCCEEEEEEEE---SSSSCEEEEEESS-SBCC------CSSSEEEEECSSEEEEEETTCCTTTC-EEEEEE
T ss_pred CCCCeEEeCCCeEEEEEEEE---cCCCCEEEEEECC-EECc------CCCCEEEEEcCCEEEEEECCCChhcC-EEEEEE
Confidence 34567889999999999998 4599999999998 4553 244666553 34799999999999 999999
Q ss_pred eeecC---cceEEEee
Q psy12724 148 TKHRL---TGETRLSA 160 (167)
Q Consensus 148 a~n~~---~~~~~l~~ 160 (167)
|.|.. +..+.|.+
T Consensus 82 a~N~~g~~~~~~~l~V 97 (114)
T 2cqv_A 82 VENKLGSRQAQVNLTV 97 (114)
T ss_dssp EECSSCEEECCEEEEE
T ss_pred EEECCCcEEEEEEEEE
Confidence 99987 33445554
No 180
>2dlt_A Myosin binding protein C, fast-type; IG-like domain, mybpc2, structural genomics, NPPSFA; NMR {Mus musculus}
Probab=99.54 E-value=1.3e-14 Score=98.40 Aligned_cols=82 Identities=24% Similarity=0.363 Sum_probs=63.1
Q ss_pred eEEEecCeEEEeCCcEEEEeeeCCccCCcceeEEEEeCCCeeeEEeeeecCCceEEEccCC---eEEEeecCcCCCCcce
Q psy12724 68 YTVNIMDEHVLKGNSAVLKCHIPSFVADYVAVESWISDQGEELFVDMTESTDGKYLVLPSG---ELHIRDVGPEDGYKSY 144 (167)
Q Consensus 68 y~c~~~~~~v~~G~~a~l~C~~~~~~~~p~p~i~W~k~~~~~l~~~~~~~~~~r~~~~~~g---~L~I~~v~~~D~~G~Y 144 (167)
+...+.+..+.+|+++.|.|.+.+ .|.| ++|+|++ ..+. ...|+.+..+| .|.|.+++.+|+ |.|
T Consensus 11 ~~~~~~~~~v~~G~~v~l~C~~~~---~~~~-v~W~k~g-~~~~------~~~~~~~~~~~~~~~L~I~~v~~~D~-G~Y 78 (106)
T 2dlt_A 11 VLQDIADLTVKAAEQAVFKCEVSD---EKVT-GKWYKNG-VEVR------PSKRITISHVGRFHKLVIDDVRPEDE-GDY 78 (106)
T ss_dssp EEECCCCEEEESSCCEECCCEESC---SSCE-EEEEESS-CBCC------CCSSCEEEEETTEEEEEESSCCTTTC-SCE
T ss_pred EecCCCCeEEeCCCeEEEEEEEcC---CCcc-eEEEcCC-EECc------CCCCEEEEEeCCEEEEEECCCCcCCC-EEE
Confidence 444556788999999999999984 4777 8999998 4553 24566666555 799999999999 999
Q ss_pred EEEeeecC-cceEEEeee
Q psy12724 145 QCRTKHRL-TGETRLSAT 161 (167)
Q Consensus 145 ~C~a~n~~-~~~~~l~~~ 161 (167)
+|.|.|.. +..+.|.+.
T Consensus 79 ~C~a~n~~~~~~~~l~V~ 96 (106)
T 2dlt_A 79 TFVPDGYALSLSAKLNFL 96 (106)
T ss_dssp EEEEETSCCCCCBCEEEE
T ss_pred EEEEccCCceEEEEEEEE
Confidence 99999973 334455554
No 181
>2gjj_A A21 single-chain antibody fragment against ERBB2; IG family, SCFV, immune system; 2.10A {Mus musculus} PDB: 3h3b_C
Probab=99.54 E-value=2.4e-13 Score=106.25 Aligned_cols=136 Identities=13% Similarity=0.218 Sum_probs=88.4
Q ss_pred ceeeEEeEEEEEeCCcEEEEeecCCCCCC---cceeeEEeeCC-Cce---eee--------cCCc----------eE---
Q psy12724 12 YYEAQVYDVFVIKGNAAVFKCNLPSFVSD---HLDVVSWADTD-GGQ---YQI--------DNQD----------FV--- 63 (167)
Q Consensus 12 ~~~~~~~~~~v~~G~~~~l~C~a~~~~~~---~~~~i~W~k~~-~~~---~~~--------~~~~----------~v--- 63 (167)
.+...|.++.+.+|+++.|.|.+.+.+.. ..+.+.|+|++ +.. +.. ...| .+
T Consensus 7 ~v~q~p~~v~v~~G~~v~L~C~~~~~~~~~~~~~~~v~W~k~~~g~~~~~l~~~~~~~~~~~~~R~~~~~~~~~~~L~I~ 86 (264)
T 2gjj_A 7 VLTQTPSSLPVSVGEKVTMTCKSSQTLLYSNNQKNYLAWYQQKPGQSPKLLISWAFTRKSGVPDRFTGSGSGTDFTLTIG 86 (264)
T ss_dssp CEEEECSEEEEETTCCEEEEEEESSCCEETTTTEECEEEEEECTTSCCEEEEETTTEECTTSCTTEEEEEETTEEEEEES
T ss_pred ceEecCCeEEecCCCcEEEEeEcCCcccccccCCceEEEEEECCCCCcEEEEEecccCCCCCCccEEEecCCCEEEEEEC
Confidence 35667888999999999999999877620 02579999853 221 110 0011 11
Q ss_pred -----EEeeeEEEecC---------------------------------------------eEEEeCCcEEEEeeeCCcc
Q psy12724 64 -----VSQSYTVNIMD---------------------------------------------EHVLKGNSAVLKCHIPSFV 93 (167)
Q Consensus 64 -----~~g~y~c~~~~---------------------------------------------~~v~~G~~a~l~C~~~~~~ 93 (167)
.+|.|.|.+.+ ..+.+|+++.|.|.+.+.
T Consensus 87 ~v~~~DsG~Y~C~~~~~~~~~~~~~~~L~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~G~~v~L~C~~~~~- 165 (264)
T 2gjj_A 87 SVKAEDLAVYYCQQYSNYPWTFGGGTRLEIKRGGGGSGGGGSGGGGSGGGGSEVQLQQSGPEVVKTGASVKISCKASGY- 165 (264)
T ss_dssp SCCGGGCEEEEEEECSSSSCEECCCEEEEEECC-------------------CCEEEECCCEEECTTCCEEEEEEEESS-
T ss_pred CCCHHHCEEEEEEEecCCccEecCCEEEEEEcCCcccccccccccccccccCcEEEeCCCCEEEcCCCcEEEEEEEeCC-
Confidence 26999997632 123469999999999743
Q ss_pred CCc--ceeEEEEeCC-Cee---eEEeee--------ecCCceEEEcc-----CCeEEEeecCcCCCCcceEEEeeec
Q psy12724 94 ADY--VAVESWISDQ-GEE---LFVDMT--------ESTDGKYLVLP-----SGELHIRDVGPEDGYKSYQCRTKHR 151 (167)
Q Consensus 94 ~~p--~p~i~W~k~~-~~~---l~~~~~--------~~~~~r~~~~~-----~g~L~I~~v~~~D~~G~Y~C~a~n~ 151 (167)
| .+.+.|+|++ +.. +..... +...+|+.+.. .+.|.|.+++.+|+ |.|.|.|.|.
T Consensus 166 --~~~~~~v~W~r~~~g~~~~~l~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~I~~v~~~Ds-G~Y~C~a~n~ 239 (264)
T 2gjj_A 166 --SFTGYFINWVKKNSGKSPEWIGHISSSYATSTYNQKFKNKAAFTVDTSSSTAFMQLNSLTSEDS-ADYYCVRSGN 239 (264)
T ss_dssp --CGGGSEEEEEEECTTSCCEEEEEEETTTCCEEECGGGTTTEEEEEETTTTEEEEEECSCCGGGC-EEEEEEEECS
T ss_pred --ccCCeEEEEEEECCCCCcEEEEEEeccCcccccCcccCCceEEEEcCCCCEEEEEECcCCcccC-EEEEEEEecC
Confidence 4 3789999963 111 111000 00135665532 24799999999999 9999999995
No 182
>2rcj_C Light chain; immunoglobulin M, polymeric antibodies, immunology, X-RAY solution scattering, constrained modelling, immune system; NMR {Homo sapiens}
Probab=99.54 E-value=5.6e-14 Score=118.69 Aligned_cols=129 Identities=22% Similarity=0.303 Sum_probs=86.5
Q ss_pred eeEEeEEEEEeCCcEEEEeecCCCCCCcceeeEEeeCC-Cceee---e-c-------CCc----------eE--------
Q psy12724 14 EAQVYDVFVIKGNAAVFKCNLPSFVSDHLDVVSWADTD-GGQYQ---I-D-------NQD----------FV-------- 63 (167)
Q Consensus 14 ~~~~~~~~v~~G~~~~l~C~a~~~~~~~~~~i~W~k~~-~~~~~---~-~-------~~~----------~v-------- 63 (167)
..+|.++.|.+|+++.|.|.+.+.+. +.+.|+|++ +..+. . + ..| .+
T Consensus 4 ~~~p~~~~v~~G~~v~L~C~~~~~~~---~~v~W~k~~~g~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~ 80 (523)
T 2rcj_C 4 LTQPPSASGTPGQRVTISCTGTSSGS---ITVNWYQQLPGMAPKLLIYRDAMRPSGVPTRFSGSKSGTSASLAISGLEAE 80 (523)
T ss_pred cccCCceEEecCCcEEEEEEEeccCC---ceEEEEEeCCCCCcEEEEEeccccCcccCCcEEEecCCCEEEEEECCCChh
Confidence 34577899999999999999987654 479999975 22110 0 0 001 11
Q ss_pred EEeeeEEEecCe--------------------------------EEEeCCcEEEEeeeCCccCCcc--eeEEEEeCCCee
Q psy12724 64 VSQSYTVNIMDE--------------------------------HVLKGNSAVLKCHIPSFVADYV--AVESWISDQGEE 109 (167)
Q Consensus 64 ~~g~y~c~~~~~--------------------------------~v~~G~~a~l~C~~~~~~~~p~--p~i~W~k~~~~~ 109 (167)
.+|.|+|.+.+. .+.+|+++.|.|.+.+. |. +.++|+||+ ..
T Consensus 81 D~G~Y~C~a~n~~g~~~~~~~~~~l~V~~~~~~~P~~~~~~~~~~~~~g~~v~l~C~~~g~---~p~~~~v~W~k~g-~~ 156 (523)
T 2rcj_C 81 DESDYYCASWNSSDNSYVFGTGTKVTVLGQPKANPTVTLFPPSSEELQANKATLVCLISDF---YPGAVTVAWKADG-SP 156 (523)
T ss_pred hCEEEEEEEccCCCccccccCceEEEeccCCCcCCeEEecCCcccccCCCceEEEEEeccc---cCCceEEEEecCC-CC
Confidence 279999987531 11358999999999853 43 489999997 45
Q ss_pred eEEeee-----ecCCceEEEccCCeEEEeecCcCCCCcceEEEeeecC
Q psy12724 110 LFVDMT-----ESTDGKYLVLPSGELHIRDVGPEDGYKSYQCRTKHRL 152 (167)
Q Consensus 110 l~~~~~-----~~~~~r~~~~~~g~L~I~~v~~~D~~G~Y~C~a~n~~ 152 (167)
+..... ...++.|.+ ...|.|.+++.+|+ |.|+|.|.|..
T Consensus 157 l~~~~~~~~~~~~~~~~~~~--~s~L~i~~~~~~d~-G~Y~C~a~n~~ 201 (523)
T 2rcj_C 157 VKAGVETTKPSKQSNNKYAA--SSYLSLTPEQWKSH-RSYSCQVTHEG 201 (523)
T ss_pred CCCceEeccccccCCCCEEE--EEEEEEechhcCCC-ceEEEEEEecC
Confidence 532100 001112211 13699999999999 99999999976
No 183
>2ckn_A Basic fibroblast growth factor receptor 1; kinase, transferase, heparin-binding, nucleotide-binding, immunoglobulin domain, alternatice splicing; NMR {Mus musculus}
Probab=99.53 E-value=2.9e-14 Score=94.98 Aligned_cols=68 Identities=24% Similarity=0.431 Sum_probs=56.4
Q ss_pred ecCeEEEeCCcEEEEeeeCCccCCcceeEEEEeCCCeeeEEeeeecCCceEEEccCCeEEEeecCcCCCCcceEEEeeec
Q psy12724 72 IMDEHVLKGNSAVLKCHIPSFVADYVAVESWISDQGEELFVDMTESTDGKYLVLPSGELHIRDVGPEDGYKSYQCRTKHR 151 (167)
Q Consensus 72 ~~~~~v~~G~~a~l~C~~~~~~~~p~p~i~W~k~~~~~l~~~~~~~~~~r~~~~~~g~L~I~~v~~~D~~G~Y~C~a~n~ 151 (167)
+.+..+.+|+++.|.|.+.+ +| |.++|+|++ ..+. .++|+.+. ++.|.|.+++.+|+ |.|+|.|.|.
T Consensus 16 ~~~~~v~~G~~v~l~C~~~g---~p-p~i~W~k~g-~~~~------~~~~~~~~-~~~L~i~~~~~~D~-G~Y~C~a~n~ 82 (95)
T 2ckn_A 16 VESLLVHPGDLLQLRCRLRD---DV-QSINWLRDG-VQLV------ESNRTRIT-GEEVEVRDSIPADS-GLYACVTSSP 82 (95)
T ss_dssp BCCEEECTTSCEEEECCEES---SC-CEEEEEBTT-BCCC------CCSSEEEC-SSEEEESSCCGGGS-EEEEEEEEET
T ss_pred cceEEEcCCCeEEEEEECCC---CC-CceEEEECC-EecC------CCCCEEEe-CCEEEECCCChHHC-EEEEEEeccC
Confidence 45677889999999999974 47 799999987 4553 34566654 78999999999999 9999999998
Q ss_pred C
Q psy12724 152 L 152 (167)
Q Consensus 152 ~ 152 (167)
.
T Consensus 83 ~ 83 (95)
T 2ckn_A 83 S 83 (95)
T ss_dssp T
T ss_pred C
Confidence 6
No 184
>2rcj_C Light chain; immunoglobulin M, polymeric antibodies, immunology, X-RAY solution scattering, constrained modelling, immune system; NMR {Homo sapiens}
Probab=99.53 E-value=2.8e-14 Score=120.57 Aligned_cols=125 Identities=16% Similarity=0.240 Sum_probs=82.8
Q ss_pred EEEEeCCcEEEEeecCCC-CCCcceeeEEeeCCCceee--------ecCC------ceE-----EEeeeEEEecC-----
Q psy12724 20 VFVIKGNAAVFKCNLPSF-VSDHLDVVSWADTDGGQYQ--------IDNQ------DFV-----VSQSYTVNIMD----- 74 (167)
Q Consensus 20 ~~v~~G~~~~l~C~a~~~-~~~~~~~i~W~k~~~~~~~--------~~~~------~~v-----~~g~y~c~~~~----- 74 (167)
..+.+|+++.|.|.+.+. |.+ + .|+|+|++...-. .++. +.+ ..|.|+|.+.+
T Consensus 229 ~~~~~G~~~~l~C~~~g~~P~p-~-~v~W~k~g~~~~~~~~~~~~~~~g~~~~~s~L~i~~~~~~dG~Y~C~a~n~~g~~ 306 (523)
T 2rcj_C 229 SKSTSGGTAALGCLVKDYFPQP-V-TVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNT 306 (523)
T ss_pred cccccCCceEEEEEEeceeCCC-e-EEEEecCCcccceEeCCcEecCCCcEEEEEEEEechhhcCCceEEEEEEeCCCCc
Confidence 456899999999999887 432 1 6999998653110 1111 000 02999998743
Q ss_pred ---------------------e-EEEeCCcEEEEeeeCCcc-CCcceeEEEEeCCCeeeEEeeeecCCceEEEccC----
Q psy12724 75 ---------------------E-HVLKGNSAVLKCHIPSFV-ADYVAVESWISDQGEELFVDMTESTDGKYLVLPS---- 127 (167)
Q Consensus 75 ---------------------~-~v~~G~~a~l~C~~~~~~-~~p~p~i~W~k~~~~~l~~~~~~~~~~r~~~~~~---- 127 (167)
. .+.+|+++.|.|.+.+.. .+|.+.++|+||+ ..+... .........+
T Consensus 307 ~~~~~l~v~~~P~~~~~~p~~~~~v~~g~~~~l~C~~~g~~p~~~~~~v~W~k~g-~~l~~~----~~~~~~~~~~g~~~ 381 (523)
T 2rcj_C 307 KVDKRVEPLSLPSVFLFPPKPKDTLMISRTPEVTCVVVDVSHEDPQVKFNWYVDG-VQVHNA----KTKPREQQYNSTYR 381 (523)
T ss_pred ceEEecCCCcCceEEecCCCchhhcccCCceEEEEEEecccCCCCceEEEEEECC-eEccCC----ccCCceecCCCcEE
Confidence 0 145699999999997641 1234699999998 455321 1111111222
Q ss_pred --CeEEEeecCcCCCCcceEEEeeecC
Q psy12724 128 --GELHIRDVGPEDGYKSYQCRTKHRL 152 (167)
Q Consensus 128 --g~L~I~~v~~~D~~G~Y~C~a~n~~ 152 (167)
+.|.|.++..+|+ |.|+|.|.|..
T Consensus 382 ~~s~L~i~~~~~~d~-G~Y~C~a~n~~ 407 (523)
T 2rcj_C 382 VVSVLTVLHQNWLDG-KEYKCKVSNKA 407 (523)
T ss_pred EEEEEEECHHHhcCC-CeEEEEEeCCC
Confidence 3599999999999 99999999975
No 185
>3irg_A Titin; IG-like, titin, OBSL1, complex, alternative splicing, ATP-binding, calcium, calmodulin-binding, cardiomyopathy; 1.30A {Homo sapiens} PDB: 3knb_A 3q5o_A 2wp3_T* 2wwk_T 2wwm_D 2y9r_T*
Probab=99.53 E-value=2.2e-14 Score=95.34 Aligned_cols=72 Identities=17% Similarity=0.327 Sum_probs=58.3
Q ss_pred ecCeEEEeCCcEEEEeeeCCccCCcceeEEEEeCCCeeeEEeeeecCCceEEEccC---CeEEEeecCcCCCCcceEEEe
Q psy12724 72 IMDEHVLKGNSAVLKCHIPSFVADYVAVESWISDQGEELFVDMTESTDGKYLVLPS---GELHIRDVGPEDGYKSYQCRT 148 (167)
Q Consensus 72 ~~~~~v~~G~~a~l~C~~~~~~~~p~p~i~W~k~~~~~l~~~~~~~~~~r~~~~~~---g~L~I~~v~~~D~~G~Y~C~a 148 (167)
+.+..+.+|+++.|.|.+.+ .|.|.++|+|++ ..+.. ...+++.+..+ +.|.|.+++.+|+ |.|+|.|
T Consensus 12 ~~~~~~~~G~~~~l~C~~~g---~p~p~v~W~~~~-~~~~~----~~~~~~~~~~~~~~~~L~i~~v~~~D~-G~Y~C~a 82 (100)
T 3irg_A 12 PSDISIDEGKVLTVACAFTG---EPTPEVTWSCGG-RKIHS----QEQGRFHIENTDDLTTLIIMDVQKQDG-GLYTLSL 82 (100)
T ss_dssp CSEEEEETTSEEEEEEEEEE---ESCCEEEEEETT-EECCT----TGGGTEEEEECSSEEEEEESSCCGGGC-EEEEEEE
T ss_pred CCcEEEcCCCcEEEEEEEEE---cCCCceEEEECC-EEeec----CCCCEEEEEecCCEEEEEEeecCcccC-EEEEEEE
Confidence 34567889999999999974 588999999987 45431 13567777655 5799999999998 9999999
Q ss_pred eecC
Q psy12724 149 KHRL 152 (167)
Q Consensus 149 ~n~~ 152 (167)
.|..
T Consensus 83 ~n~~ 86 (100)
T 3irg_A 83 GNEF 86 (100)
T ss_dssp EETT
T ss_pred EeCC
Confidence 9987
No 186
>3u83_A Poliovirus receptor-related protein 1; nectin-1, hinge region plasiticity, cell adhesion; HET: PG6; 2.50A {Homo sapiens} PDB: 3alp_A* 3u82_B 4fmf_A* 3sku_E* 2l7j_A
Probab=99.53 E-value=9.5e-14 Score=110.10 Aligned_cols=133 Identities=15% Similarity=0.261 Sum_probs=83.7
Q ss_pred eeeEEeEEEEEeCCcEEEEeecCCCCC-CcceeeEEeeCCCce--------------eee--------------cCCceE
Q psy12724 13 YEAQVYDVFVIKGNAAVFKCNLPSFVS-DHLDVVSWADTDGGQ--------------YQI--------------DNQDFV 63 (167)
Q Consensus 13 ~~~~~~~~~v~~G~~~~l~C~a~~~~~-~~~~~i~W~k~~~~~--------------~~~--------------~~~~~v 63 (167)
+...+.++.+.+|+++.|.|.+.+... ...+.+.|+|++... +.. +....+
T Consensus 17 ~~~~~~~~~v~~G~~v~L~C~~~~~~~~~~~~~v~W~k~~~~~~~~i~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~L~I 96 (331)
T 3u83_A 17 VVQVNDSMYGFIGTDVVLHCSFANPLPSVKITQVTWQKSTNGSKQNVAIYNPSMGVSVLAPYRERVEFLRPSFTDGTIRL 96 (331)
T ss_dssp ----CEEEEEETTCCEEECCBCSSCCSSCEEEEEEEEEEETTEEEEEEEEETTTEEEECTTCTTTEEESSCSSSBCCEEE
T ss_pred eEEcCCcEEEEecCCEEEeeecCCCCCCCceEEEEEEEcCCCCCceEEEEeccCCCCcCcccCCceEecccCCCCceEEE
Confidence 556677889999999999999987522 234679999953210 000 000111
Q ss_pred ------EEeeeEEEec----------------------------CeEEEeC---CcEEEEee-eCCccCCcceeEEEEeC
Q psy12724 64 ------VSQSYTVNIM----------------------------DEHVLKG---NSAVLKCH-IPSFVADYVAVESWISD 105 (167)
Q Consensus 64 ------~~g~y~c~~~----------------------------~~~v~~G---~~a~l~C~-~~~~~~~p~p~i~W~k~ 105 (167)
..|.|+|.+. +..+.+| +.+.|.|. +. +.|.|.++|+|+
T Consensus 97 ~~v~~~D~G~Y~C~~~~~~~~~~~~~~~l~V~~~p~~~~~~~~~~~~~~~g~~~~~~~l~C~~~~---~~p~~~i~W~~~ 173 (331)
T 3u83_A 97 SRLELEDEGVYICEFATFPTGNRESQLNLTVMAKPTNWIEGTQAVLRAKKGQDDKVLVATCTSAN---GKPPSVVSWETR 173 (331)
T ss_dssp CSCCGGGCEEEEEEEEEETTEEEEEEEEEEEEBCCEEEEEECSSCEEECTTCCCCEEEEEEEEEE---EBSCCEEEEEES
T ss_pred cccCcccCcEEEEEEEecCCCccEEEEEEEEecCCcceeecCCCceeecCCCccceEEEEEEecC---CcCCceEEEEcC
Confidence 2799999741 0123467 67999998 55 458899999996
Q ss_pred CC-eeeEEeeeecCCceEEEccCCeEEEeecCcCCCCcceEEEeeecC
Q psy12724 106 QG-EELFVDMTESTDGKYLVLPSGELHIRDVGPEDGYKSYQCRTKHRL 152 (167)
Q Consensus 106 ~~-~~l~~~~~~~~~~r~~~~~~g~L~I~~v~~~D~~G~Y~C~a~n~~ 152 (167)
+. ....... ...++.+.+ ...|.|.++..+|+ |.|+|.|.|..
T Consensus 174 ~~~~~~~~~~-~~~~~~~~~--~~~L~i~~~~~~d~-G~Y~C~a~n~~ 217 (331)
T 3u83_A 174 LKGEAEYQEI-RNPNGTVTV--ISRYRLVPSREAHQ-QSLACIVNYHM 217 (331)
T ss_dssp SCCEEEEEEE-ECTTSCEEE--EEEEEECCCGGGTT-CEEEEEEEETT
T ss_pred CCCcccccee-ECCCCcEEE--EEEEEEEeccccCC-CEEEEEEecCC
Confidence 42 1211111 112333333 24688889999999 99999999986
No 187
>1x9q_A SCFV, 4M5.3 anti-fluorescein single chain antibody fragment; VERY high affinity, antibody binding, electrostatics, directed evolution; HET: FLU; 1.50A {Homo sapiens}
Probab=99.52 E-value=2.5e-13 Score=105.89 Aligned_cols=136 Identities=15% Similarity=0.227 Sum_probs=88.7
Q ss_pred eeeEEeEEEEEeCCcEEEEeecCCCCCC--cceeeEEeeCC-Cce---eee--------cCCc----------eE-----
Q psy12724 13 YEAQVYDVFVIKGNAAVFKCNLPSFVSD--HLDVVSWADTD-GGQ---YQI--------DNQD----------FV----- 63 (167)
Q Consensus 13 ~~~~~~~~~v~~G~~~~l~C~a~~~~~~--~~~~i~W~k~~-~~~---~~~--------~~~~----------~v----- 63 (167)
+...|.++.|.+|+++.|.|.+.+.+.. ..+.+.|+|++ +.. +.. ...| .+
T Consensus 18 v~~~p~~~~v~~G~~v~L~C~~~~~~~~~~~~~~v~W~k~~~g~~~~~l~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v 97 (268)
T 1x9q_A 18 MTQTPLSLPVSLGDQASISCRSSQSLVHSNGNTYLRWYLQKPGQSPKVLIYKVSNRVSGVPDRFSGSGSGTDFTLKINRV 97 (268)
T ss_dssp EEEECSEECCCTTCCEEEEEEESSCCBCTTSCBCEEEEEECTTSCCEEEEETTTEECTTSCTTEEEEEETTEEEEEESSC
T ss_pred EEeeCCeEEecCCCCEEEEeEecCCcccccCCceEEEEEECCCCCCEEEEEecCCCCCCCcccEEEEcCCCEEEEEECCC
Confidence 5667888999999999999999877620 01479999864 221 110 0011 11
Q ss_pred ---EEeeeEEEecC-------------------------------------------------eEEEeCCcEEEEeeeCC
Q psy12724 64 ---VSQSYTVNIMD-------------------------------------------------EHVLKGNSAVLKCHIPS 91 (167)
Q Consensus 64 ---~~g~y~c~~~~-------------------------------------------------~~v~~G~~a~l~C~~~~ 91 (167)
.+|.|.|.+.+ ..+.+|+++.|.|.+.+
T Consensus 98 ~~~DsG~Y~C~~~~~~~~~~~~~~~L~V~~~~~~~~p~~pp~~~~~~~~~~~~~~v~~~~~~~~~v~~G~~v~L~C~~~~ 177 (268)
T 1x9q_A 98 EAEDLGVYFCSQSTHVPWTFGGGTKLEIKSSADDAKKDAAKKDDAKKDDAKKDGGVKLDETGGGLVQPGGAMKLSCVTSG 177 (268)
T ss_dssp CGGGCEEEEEEECSSSSCEECCCEEEC------------------------CGGGCEEEEECCEEECTTCCEEEEEEEES
T ss_pred ChhHCEEEEEEEecCCCceEcCCEEEEEccCccCCCccccccccccccccccccceEEECCCceEecCCCcEEEEEEecC
Confidence 16999997632 12345999999999974
Q ss_pred ccCCc-ceeEEEEeCC-Ceee---EEee----------eecCCceEEEccC-----CeEEEeecCcCCCCcceEEEeeec
Q psy12724 92 FVADY-VAVESWISDQ-GEEL---FVDM----------TESTDGKYLVLPS-----GELHIRDVGPEDGYKSYQCRTKHR 151 (167)
Q Consensus 92 ~~~~p-~p~i~W~k~~-~~~l---~~~~----------~~~~~~r~~~~~~-----g~L~I~~v~~~D~~G~Y~C~a~n~ 151 (167)
. .| .+.+.|+|++ +..+ .... .+...+|+.+..+ +.|.|.+++.+|+ |.|.|.|.|.
T Consensus 178 ~--~~~~~~v~W~k~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~I~~v~~~Ds-G~Y~C~a~~~ 254 (268)
T 1x9q_A 178 F--TFGHYWMNWVRQSPEKGLEWVAQFRNKPYNYETYYSDSVKGRFTISRDDSKSSVYLQMNNLRVEDT-GIYYCTGASY 254 (268)
T ss_dssp S--CGGGCEEEEEEEETTTEEEEEEEECCGGGTTCEEECTTTTTTEEEEEEGGGTEEEEEECSCCGGGC-EEEEEEEEET
T ss_pred c--cccccEEEEEEeCCCCCcEEEEEEcccccccccccCCccCCeEEEEEeCCCCEEEEEECCCCHHHC-EEEEEEEccC
Confidence 3 12 4789999853 1221 1100 0012467776532 4799999999999 9999999985
No 188
>2yr3_A Myosin light chain kinase, smooth muscle; IG domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.52 E-value=2e-14 Score=95.97 Aligned_cols=76 Identities=26% Similarity=0.459 Sum_probs=59.1
Q ss_pred eeeEEEecCeEEEeCCcEEEEeeeCCccCCcceeEEEEeCCCeeeEEeeeecCCceEEEccCCeEEEeecCcCCCCcceE
Q psy12724 66 QSYTVNIMDEHVLKGNSAVLKCHIPSFVADYVAVESWISDQGEELFVDMTESTDGKYLVLPSGELHIRDVGPEDGYKSYQ 145 (167)
Q Consensus 66 g~y~c~~~~~~v~~G~~a~l~C~~~~~~~~p~p~i~W~k~~~~~l~~~~~~~~~~r~~~~~~g~L~I~~v~~~D~~G~Y~ 145 (167)
+.+.-.+.+..+.+|+++.|.|.+.+ .|.|.++|+|++ ..+. ...+.....++.|.|.+++.+|+ |.|+
T Consensus 12 P~~~~~~~~~~v~~G~~v~l~C~~~g---~p~p~v~W~~~g-~~~~------~~~~~~~~~~~~L~i~~v~~~D~-G~Y~ 80 (99)
T 2yr3_A 12 PSFSSVLKDCAVIEGQDFVLQCSVRG---TPVPRITWLLNG-QPIQ------YARSTCEAGVAELHIQDALPEDH-GTYT 80 (99)
T ss_dssp EEEEECCCCEEECTTCCEEEECEEEE---ESCCCCEEEESS-SBCS------SCCCEEETTEEEEEECSCCTTCC-BCEE
T ss_pred CceeecCCCCEEeCCCeEEEEEEEee---eCCCeEEEEECC-EECc------ccceEeeCCeEEEEECCCChhhC-EEEE
Confidence 33445556778899999999999974 588999999997 4542 12333333446899999999999 9999
Q ss_pred EEeeecC
Q psy12724 146 CRTKHRL 152 (167)
Q Consensus 146 C~a~n~~ 152 (167)
|.|.|..
T Consensus 81 C~a~N~~ 87 (99)
T 2yr3_A 81 CLAENAL 87 (99)
T ss_dssp EEEECSS
T ss_pred EEEEECC
Confidence 9999987
No 189
>3cx2_A Myosin-binding protein C, cardiac-type; protonation states, actin-binding, cardiomyopathy, cell adhesion, disease mutation, immunoglobulin domain; 1.30A {Homo sapiens} PDB: 2v6h_A 2avg_A
Probab=99.52 E-value=2.2e-14 Score=97.86 Aligned_cols=85 Identities=19% Similarity=0.275 Sum_probs=59.5
Q ss_pred eEEEecCeEEEeCCcEEEEeeeCCccCCcc---eeEEEEeCCCeeeEEeeeecCCceEEEc---------cCCeEEEeec
Q psy12724 68 YTVNIMDEHVLKGNSAVLKCHIPSFVADYV---AVESWISDQGEELFVDMTESTDGKYLVL---------PSGELHIRDV 135 (167)
Q Consensus 68 y~c~~~~~~v~~G~~a~l~C~~~~~~~~p~---p~i~W~k~~~~~l~~~~~~~~~~r~~~~---------~~g~L~I~~v 135 (167)
|.-.+.+..+.+|++|+|.|.+.+ .|. |.|+|+|++. ..... ..+.++.+. .++.|.|+++
T Consensus 7 f~~~p~~~~v~~G~~v~L~C~~~g---~p~~~~p~v~W~k~~~-~~~~~---~~~~~~~~~~~~~~~~~~~~~~L~I~~v 79 (108)
T 3cx2_A 7 FVMRPQDGEVTVGGSITFSARVAG---ASLLKPPVVKWFKGKW-VDLSS---KVGQHLQLHDSYDRASKVYLFELHITDA 79 (108)
T ss_dssp CSBCCCCEEEETTCCEEEEEEEEC---C-CCSCCEEEEEETTT-EEGGG---GCBTTEEEEEEEETTTTEEEEEEEECSC
T ss_pred EEeCCCcEEEeCCCCEEEEEEECC---CccCCCcEEEEccCCc-ccccc---cCCceEEEeeEEecccccceEEEEEecC
Confidence 444556778999999999999974 477 9999999862 21100 112344332 1457999999
Q ss_pred CcCCCCcceEEEeeecC---cceEEEee
Q psy12724 136 GPEDGYKSYQCRTKHRL---TGETRLSA 160 (167)
Q Consensus 136 ~~~D~~G~Y~C~a~n~~---~~~~~l~~ 160 (167)
+.+|+ |.|+|.|.|.. +..+.|.+
T Consensus 80 ~~~D~-G~Y~C~a~N~~G~~~~~~~L~V 106 (108)
T 3cx2_A 80 QPAFT-GSYRCEVSTKDKFDCSNFNLTV 106 (108)
T ss_dssp CGGGC-EEEEEEEECSSCEEEEEEEEEE
T ss_pred CCccC-EEEEEEEecCCCceEEEEEEEE
Confidence 99999 99999999987 33445554
No 190
>1gxe_A Myosin binding protein C, cardiac-type; cytoskeleton, muscle, IGI, thick filament, immunoglobulin domain; NMR {Homo sapiens} SCOP: b.1.1.4
Probab=99.52 E-value=9.2e-15 Score=105.30 Aligned_cols=72 Identities=21% Similarity=0.238 Sum_probs=56.7
Q ss_pred ecCeEEEeCCcEEEEeeeCCccCCcceeEEEEeCCC---------------------------eeeEEeeeecCCceEEE
Q psy12724 72 IMDEHVLKGNSAVLKCHIPSFVADYVAVESWISDQG---------------------------EELFVDMTESTDGKYLV 124 (167)
Q Consensus 72 ~~~~~v~~G~~a~l~C~~~~~~~~p~p~i~W~k~~~---------------------------~~l~~~~~~~~~~r~~~ 124 (167)
+.+..+.+|+++.|.|.+.| .|.|.|+|+|++. ..+. ....|+.+
T Consensus 25 p~~~~v~~G~~v~L~C~~~G---~P~P~i~W~k~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~-----~~~~r~~i 96 (139)
T 1gxe_A 25 PDTIVVVAGNKLRLDVPISG---DPAPTVIWQKAITQGNKAPARPAPDAPEDTGDSDEWVFDKKLLC-----ETEGRVRV 96 (139)
T ss_dssp CCEEEESSSSCCCCEEECCS---BSCCEEEEEEECCCSCSSCCCCCCCCCCCCCCSSCCCCSCCCCC-----SCSSSCEE
T ss_pred CCCEEEeCCCeEEEEEEEEE---cCCCeEEEEECCcccccccccccccccccccccccccccceeec-----CCCCeEEE
Confidence 35678899999999999984 5999999999872 1221 13456655
Q ss_pred ccCC---eEEEeecCcCCCCcceEEEeeecC
Q psy12724 125 LPSG---ELHIRDVGPEDGYKSYQCRTKHRL 152 (167)
Q Consensus 125 ~~~g---~L~I~~v~~~D~~G~Y~C~a~n~~ 152 (167)
..++ .|.|.+++.+|+ |.|+|.|.|..
T Consensus 97 ~~~~~~s~L~I~~v~~~Ds-G~Y~C~A~N~~ 126 (139)
T 1gxe_A 97 ETTKDRSIFTVEGAEKEDE-GVYTVTVKNPV 126 (139)
T ss_dssp EEETTEEEEECSCCCTTTC-EEEEEEEECSS
T ss_pred EeCCCEEEEEECCCCcccC-EEEEEEEEeCC
Confidence 5444 599999999999 99999999997
No 191
>1c1e_H Catalytic antibody 1E9 (heavy chain); diels-alder, immunoglobulin, immune system; HET: ENH; 1.90A {Mus musculus} SCOP: b.1.1.1 b.1.1.2 PDB: 1dbb_H* 1dba_H* 1dbj_H* 1dbk_H* 1dbm_H* 2dbl_H* 3ojd_B 1jgl_H* 1jhk_H 1ghf_H 1tet_H* 3e8u_H 1fj1_B 1cl7_H
Probab=99.52 E-value=4.4e-14 Score=106.41 Aligned_cols=130 Identities=13% Similarity=0.230 Sum_probs=84.1
Q ss_pred eEEeEEEEEeCCcEEEEeecCCCCCCcceeeEEeeCC-Cceee----ec------------CCc------------eE--
Q psy12724 15 AQVYDVFVIKGNAAVFKCNLPSFVSDHLDVVSWADTD-GGQYQ----ID------------NQD------------FV-- 63 (167)
Q Consensus 15 ~~~~~~~v~~G~~~~l~C~a~~~~~~~~~~i~W~k~~-~~~~~----~~------------~~~------------~v-- 63 (167)
.++..+.+.+|+++.|.|.+.+.+.+ .+.+.|+|++ +..+. .. ..| .+
T Consensus 5 ~~p~~~~v~~G~~v~L~C~~~~~~~~-~~~v~W~k~~~g~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~~L~I 83 (219)
T 1c1e_H 5 VQSGPELKKPGETVKISCKASGYMFT-NYGMNWVKQAPGKALKLMGWINPYTGESTFADDFKGRFAFFLETSATTAYLQI 83 (219)
T ss_dssp EECCCEEECTTCCEEEEEEEESSCGG-GSEEEEEEECTTSCEEEEEEECSSSCCEEECGGGCSSEEEEEEGGGTEEEEEE
T ss_pred eCCCCeEecCCCcEEEEEEEeCcccc-cceEEEEEeCCCCCcEEEEEEecCCCceEeCcccCCcEEEEEecCCCEEEEEE
Confidence 45677899999999999999876522 2579999874 32211 00 011 11
Q ss_pred ------EEeeeEEEecCe--------------E-------------------EEeCCcEEEEeeeCCccCCcce-eEEEE
Q psy12724 64 ------VSQSYTVNIMDE--------------H-------------------VLKGNSAVLKCHIPSFVADYVA-VESWI 103 (167)
Q Consensus 64 ------~~g~y~c~~~~~--------------~-------------------v~~G~~a~l~C~~~~~~~~p~p-~i~W~ 103 (167)
.+|.|.|.+.+. . +.+|+++.|.|.+.+. .|.| .++|+
T Consensus 84 ~~v~~~D~G~Y~C~~~~~~~~~~~~~~~~~~l~V~~~~~~~P~i~~~~~~~~~~~g~~v~L~C~~~g~--~P~p~~v~W~ 161 (219)
T 1c1e_H 84 NNLKNEDMATYFCARGTTIVRAMDYWGQGTSLTVSSAKTTPPSVYPLAPGSAAQTNSMVTLGCLVKGY--FPEPVTVTWN 161 (219)
T ss_dssp CSCCGGGCEEEEEEEEETTTTEEEEECCCEEEEECCCCCBCCEEEEECCCSSSCCSSEEEEEEEEEEE--BSSCCEEEEG
T ss_pred CCCCcccCEEEEEEEeccCcccceeecCceEEEEecCCCCCCeEEEecCccccccCCeEEEEEEcccc--cCCCeEEEEE
Confidence 169999986431 0 1258999999999851 4888 99999
Q ss_pred eCCCeeeEEeeee--cCCceEEEccCCeEEEeecCcCCCCcceEEEeeecC
Q psy12724 104 SDQGEELFVDMTE--STDGKYLVLPSGELHIRDVGPEDGYKSYQCRTKHRL 152 (167)
Q Consensus 104 k~~~~~l~~~~~~--~~~~r~~~~~~g~L~I~~v~~~D~~G~Y~C~a~n~~ 152 (167)
|++ ..+...... ...++|.. .+.|.| +....|. |.|+|.|.|..
T Consensus 162 ~~g-~~~~~~~~~~~~~~~~~~~--~s~L~i-~~~~~d~-g~Y~C~a~n~~ 207 (219)
T 1c1e_H 162 SGS-LSSGVHTFPAVLQSDLYTL--SSSVTV-PSSPRPS-ETVTCNVAHPA 207 (219)
T ss_dssp GGT-BCTTEEECCCEESSSCEEE--EEEEEE-ESSSTTT-SCCEEEEEEGG
T ss_pred eCC-cccceEecCCcccCCeEEE--EEEEEE-ecccCCC-CEEEEEEEeCC
Confidence 997 332110000 01133432 246999 5555688 99999999987
No 192
>3tv3_L PGT128 light chain, IG lambda-2 chain C regions; FAB, HIV-1 neutralizing antibody, GP120, immune system; HET: PCA MAN GOL EPE; 1.29A {Homo sapiens} PDB: 3tyg_L* 3twc_L* 3tnm_L 2mcg_1 1mcw_M 1a8j_L 3mcg_1 1dcl_A 1mcb_A* 1mcc_A* 1mcd_A* 1mce_A* 1mcf_A* 1mch_A 1mci_A* 1mcj_A* 1mck_A 1mcl_A* 1mcn_A* 1mcq_A ...
Probab=99.52 E-value=2.7e-14 Score=106.86 Aligned_cols=127 Identities=20% Similarity=0.306 Sum_probs=83.4
Q ss_pred eEEeEEEEEeCCcEEEEeecCCCCCCcceeeEEeeCC-Ccee--ee---------cCCc----------eE--------E
Q psy12724 15 AQVYDVFVIKGNAAVFKCNLPSFVSDHLDVVSWADTD-GGQY--QI---------DNQD----------FV--------V 64 (167)
Q Consensus 15 ~~~~~~~v~~G~~~~l~C~a~~~~~~~~~~i~W~k~~-~~~~--~~---------~~~~----------~v--------~ 64 (167)
..+ ++.+.+|+++.|.|.+. +. +.+.|+|++ +..+ .. ...| .+ .
T Consensus 6 ~~~-~~~v~~G~~v~L~C~~~--~~---~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~D 79 (211)
T 3tv3_L 6 QPP-SASGSPGQSITISCTGT--SN---NFVSWYQQHAGKAPKLVIYDVNKRPSGVPDRFSGSKSGNTASLTVSGLQTDD 79 (211)
T ss_dssp CCS-EEEECTTCEEEEEEECC--CS---SCEEEEEECTTSCCEEEEBTTTBCCTTSCTTEEEEEETTEEEEEEESCCGGG
T ss_pred eCc-eEEEcCCCCEEEEEEEC--CC---CeEEEEEECCCCCCEEEEEEecccCCCCcCcEEEEccCCEEEEEECCCChhH
Confidence 344 78999999999999998 32 479999842 1111 00 0011 11 1
Q ss_pred EeeeEEEecCe------------EE-------------------EeCCcEEEEeeeCCccCCcceeEEEEeCCCeeeEEe
Q psy12724 65 SQSYTVNIMDE------------HV-------------------LKGNSAVLKCHIPSFVADYVAVESWISDQGEELFVD 113 (167)
Q Consensus 65 ~g~y~c~~~~~------------~v-------------------~~G~~a~l~C~~~~~~~~p~p~i~W~k~~~~~l~~~ 113 (167)
+|.|.|.+.+. .| .+|+++.|.|.+.+. ..|.+.++|+||+ ..+...
T Consensus 80 ~G~Y~C~~~~~~~~~~~~~~~~l~V~~~~~~~P~v~~~~~~~~~~~g~~v~l~C~~~g~-~p~~~~v~W~k~g-~~l~~~ 157 (211)
T 3tv3_L 80 EAVYYCGSLVGNWDVIFGGGTKLTVLGQPKAAPSVTLFPPSSEELQANKATLVCLISDF-YPGAVTVAWKADS-SPVKAG 157 (211)
T ss_dssp CEEEEEEEEETTTEEEECCCEEEEECCSCCBCCEEEEECCCHHHHHTTCEEEEEEEEEE-BSSCCEEEEEETT-EEECTT
T ss_pred CEEEEEEEecCCCceeECCCceEEEeCCCCcCCeeEecCCchhhhcCCCeEEEEEeeee-cCCCeEEEEEECC-eecCCC
Confidence 79999987430 01 149999999999753 1246789999997 555210
Q ss_pred e-----eecCCceEEEccCCeEEEeecCcCCCCcceEEEeeecC
Q psy12724 114 M-----TESTDGKYLVLPSGELHIRDVGPEDGYKSYQCRTKHRL 152 (167)
Q Consensus 114 ~-----~~~~~~r~~~~~~g~L~I~~v~~~D~~G~Y~C~a~n~~ 152 (167)
. ....++.|.+. ..|.|.++..+|+ |.|+|.|.|..
T Consensus 158 ~~~~~~~~~~~~~~~~~--s~L~i~~~~~~d~-g~Y~C~v~~~~ 198 (211)
T 3tv3_L 158 VETTTPSKQSNNKYAAS--SYLSLTPEQWKSH-RSYSCQVTHEG 198 (211)
T ss_dssp EEECCCEECTTSSEEEE--EEEEECHHHHHHS-SCEEEEEEETT
T ss_pred cccCCceECCCCCEEEE--EEEEEcHHHhCCC-CeEEEEEEECC
Confidence 0 00123334332 4699999999998 99999999986
No 193
>3s96_B 3B5H10 FAB light chain; huntingtin, immune system; 1.90A {Mus musculus} PDB: 2qhr_L 3ffd_B 4dcq_A
Probab=99.52 E-value=9e-14 Score=104.19 Aligned_cols=130 Identities=21% Similarity=0.383 Sum_probs=83.5
Q ss_pred eeeEEeEEEEEeCCcEEEEeecCCC-CCCcceeeEEeeCC---Ccee--eecC-----------Cce----------E--
Q psy12724 13 YEAQVYDVFVIKGNAAVFKCNLPSF-VSDHLDVVSWADTD---GGQY--QIDN-----------QDF----------V-- 63 (167)
Q Consensus 13 ~~~~~~~~~v~~G~~~~l~C~a~~~-~~~~~~~i~W~k~~---~~~~--~~~~-----------~~~----------v-- 63 (167)
+...+ ++.|.+|+++.|.|.+.+. +. +.+.|+|.+ ...+ ..+. .|. +
T Consensus 4 v~~~p-~~~v~~G~~v~L~C~~~~~~~~---~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I 79 (218)
T 3s96_B 4 LTQSS-SASFSLGASAKLTCTLNSQHST---YTIEWYQQQPLKPPKYVMELKKDGSHSTGDGIPDRFSGSSSGADRYLSI 79 (218)
T ss_dssp EECCS-EEEEETTSCEEEEEEECGGGTT---CCEEEEEECTTSCCEEEEEECTTSCEEECSSCCTTEEEEEETTEEEEEE
T ss_pred EEeCC-cEEECCCCcEEEEEECCCCCCC---cEEEEEEECCCCCeEEEEEEcccCccccCCCcccceEEecCCceEEEEE
Confidence 34455 8899999999999999987 43 479999842 1110 0001 010 1
Q ss_pred ------EEeeeEEEecCe---------------EE-------------------EeCCcEEEEeeeCCccCCcce-eEEE
Q psy12724 64 ------VSQSYTVNIMDE---------------HV-------------------LKGNSAVLKCHIPSFVADYVA-VESW 102 (167)
Q Consensus 64 ------~~g~y~c~~~~~---------------~v-------------------~~G~~a~l~C~~~~~~~~p~p-~i~W 102 (167)
.+|.|.|.+.+. .| ..|+++.|.|.+.+. .|.| .++|
T Consensus 80 ~~v~~~D~G~Y~C~~~~~~~~~~~~~~~~~~~l~V~~~~~~~P~~~~~~~~~~~~~~~~v~L~C~~~g~--~p~~~~v~W 157 (218)
T 3s96_B 80 SNIQPEDEAIYICGVGDTIKEQFVYVFGGGTKVTVLGQPKSTPTLTVFPPSSEELKENKATLVCLISNF--SPSGVTVAW 157 (218)
T ss_dssp SSCCGGGCEEEEEEEEEEETTEEEEEECCCEEEEEESCCCBCCEEEEECCCHHHHHTTEEEEEEEEEEE--BSSCCEEEE
T ss_pred ccCCcccCEEEEEEEecCCCCceeEEEcCcEEEEEecCCCCCceEEeeCCCcccccCCcEEEEEEECcc--cCCCeEEEE
Confidence 279999987321 11 246789999999752 3666 8999
Q ss_pred EeCCCeeeEEee----eecCCceEEEccCCeEEEeecCcCCCCcceEEEeeecC
Q psy12724 103 ISDQGEELFVDM----TESTDGKYLVLPSGELHIRDVGPEDGYKSYQCRTKHRL 152 (167)
Q Consensus 103 ~k~~~~~l~~~~----~~~~~~r~~~~~~g~L~I~~v~~~D~~G~Y~C~a~n~~ 152 (167)
+||+ ..+.... ....++.|.+ ...|.|.+...+|+ |.|+|.|.|..
T Consensus 158 ~k~g-~~l~~~~~~~~~~~~~~~~~~--~s~l~i~~~~~~d~-g~Y~C~a~n~~ 207 (218)
T 3s96_B 158 KANG-TPITQGVDTSNPTKEGNKFMA--SSFLHLTSDQWRSH-NSFTCQVTHEG 207 (218)
T ss_dssp EETT-EEC--------------CEEE--EEEEEEEHHHHHTC-SCEEEEEEETT
T ss_pred EECC-EECcCceecCcccccCCcEEE--EEEEEEeHHHccCC-CeEEEEEEeCC
Confidence 9987 5553211 0001233433 23588999999998 99999999987
No 194
>3eow_R Poliovirus receptor; immunoglobulin super family, alternative splicing, cell adhesion, cell membrane, glycoprotein, HOST-virus interaction; 3.50A {Homo sapiens} PDB: 3uro_R 3epc_R* 3epd_R* 3epf_R*
Probab=99.51 E-value=4e-14 Score=106.81 Aligned_cols=131 Identities=18% Similarity=0.249 Sum_probs=82.6
Q ss_pred EeEEEEEeCCcEEEEeecCC-CCCCc-ceeeEEeeCCCce--------------------eeec------CCceE-----
Q psy12724 17 VYDVFVIKGNAAVFKCNLPS-FVSDH-LDVVSWADTDGGQ--------------------YQID------NQDFV----- 63 (167)
Q Consensus 17 ~~~~~v~~G~~~~l~C~a~~-~~~~~-~~~i~W~k~~~~~--------------------~~~~------~~~~v----- 63 (167)
+.++.+.+|+++.|.|.+.+ .+.+. ...+.|+|++... +..+ ++..+
T Consensus 6 p~~v~~~~G~~v~L~C~~~~~~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~sL~I~~v 85 (221)
T 3eow_R 6 PTQVPGFLGDSVTLPCYLQVPNMEVTHVSQLTWARHGESGSMAVFHQTQGPSYSESKRLEFVAARLGAELRDASLRMFGL 85 (221)
T ss_dssp CCCCCCCCSSCCEEECCCCCCSSSCCCEEEEEECBSSSCSSCCCEEESSSEEECSCSSCEEESSCSSCCCCCCEEECCCS
T ss_pred CCcEEEEeCCCEEEEeeeccCCCCCccceEEEEEeCCCCceEEEEECCCCCCcCCCCcEEEecccCCCCCCCceEEEccC
Confidence 45677899999999999955 33221 2359999985311 0000 01111
Q ss_pred ---EEeeeEEEecCe-------------------E------EEeCCcE-EEEeeeCCccCCcceeEEEEeCCCeeeE-Ee
Q psy12724 64 ---VSQSYTVNIMDE-------------------H------VLKGNSA-VLKCHIPSFVADYVAVESWISDQGEELF-VD 113 (167)
Q Consensus 64 ---~~g~y~c~~~~~-------------------~------v~~G~~a-~l~C~~~~~~~~p~p~i~W~k~~~~~l~-~~ 113 (167)
.+|.|+|.+.+. . ...|+.+ .|.|.+.+ +.|.|.++|+|++..... ..
T Consensus 86 ~~~D~G~Y~C~~~~~~~~~~~~~~~L~V~~~P~~~~~~~~~~~~g~~~~~l~C~~~~--g~P~p~v~W~k~~~~~~~~~~ 163 (221)
T 3eow_R 86 RVEDEGSYTCLFVTFPQGSRSVDIWLRVLAKPQNTAEVQKVQLTGEPVPMARCVSTG--GRPPAQITWHSDLGGMPQTSQ 163 (221)
T ss_dssp SCCCCSCBEEEEEESSSCSCEEECCCCCCCCCEEEEEEECCCCCSSSCCEEEEEEES--CSSCCCEEEECSSSCCCCCEE
T ss_pred ChHHCeEEEEEEEeCCCCceEEEEEEEEEECCCceeecCCcccCCceEEEEEEECCC--ccCCCeeEEEeCCCCCCccce
Confidence 379999986420 0 1357788 49999863 458899999987532211 11
Q ss_pred eeecCCceEEEccCCeEEEeecCcCCCCcceEEEeeecC
Q psy12724 114 MTESTDGKYLVLPSGELHIRDVGPEDGYKSYQCRTKHRL 152 (167)
Q Consensus 114 ~~~~~~~r~~~~~~g~L~I~~v~~~D~~G~Y~C~a~n~~ 152 (167)
.....++.+. ..+.|.|.++..+|+ |.|+|.|.|..
T Consensus 164 ~~~~~~~~~~--~~s~L~i~~~~~~d~-g~ytC~a~n~~ 199 (221)
T 3eow_R 164 VPGFLSGTVT--VTSLWILVPSSQVDG-KQVTCKVEHES 199 (221)
T ss_dssp ECCCCBTTBC--CEEEEECCCCSCCCC-CCEEEEECCSC
T ss_pred eecCCCCcEE--EEEEEEEeCCHHHCC-CeEEEEEECCC
Confidence 0001122221 124699999999998 99999999987
No 195
>3kvq_A Vascular endothelial growth factor receptor 2; vegfr2, angiogenesis, ATP-binding, developmental protein, differentiation, glycoprotein; 2.70A {Homo sapiens} SCOP: b.1.1.0
Probab=99.51 E-value=5.6e-14 Score=94.98 Aligned_cols=82 Identities=24% Similarity=0.318 Sum_probs=56.5
Q ss_pred EEEecCeEEEeCCcEEEEeeeCCccCCcceeEEEEeCCCeeeEEeeeecCCceEE-EccCCeEEEeecCcCCCCcceEEE
Q psy12724 69 TVNIMDEHVLKGNSAVLKCHIPSFVADYVAVESWISDQGEELFVDMTESTDGKYL-VLPSGELHIRDVGPEDGYKSYQCR 147 (167)
Q Consensus 69 ~c~~~~~~v~~G~~a~l~C~~~~~~~~p~p~i~W~k~~~~~l~~~~~~~~~~r~~-~~~~g~L~I~~v~~~D~~G~Y~C~ 147 (167)
.-.+.+..+.+|+++.|.|.+. +.|.|.++|+|++ ..+. ...++. ...++.|.|.+++.+|+ |.|+|.
T Consensus 14 ~~~~~~~~v~~G~~v~l~C~~~---g~p~p~i~W~~~~-~~~~------~~~~~~~~~~~~~L~i~~v~~~D~-G~Y~C~ 82 (108)
T 3kvq_A 14 TGNLENQTTSIGESIEVSCTAS---GNPPPQIMWFKDN-ETLV------EDSGIVLKDGNRNLTIRRVRKEDE-GLYTCQ 82 (108)
T ss_dssp BSCCCCEEEETTCCEEEECBCC-------CCEEEEESS-SBCC------CBTTEEEETTTTEEEECSCCGGGC-EEEEEE
T ss_pred ecCCCCeEEeCCCeEEEEEECc---CcCCCeEEEEECC-eEcc------cCCCeEEeCCCcEEEEeecCcccC-EEEEEE
Confidence 3344567889999999999997 4588999999997 4543 123333 33567899999999999 999999
Q ss_pred eeecC---cceEEEeee
Q psy12724 148 TKHRL---TGETRLSAT 161 (167)
Q Consensus 148 a~n~~---~~~~~l~~~ 161 (167)
|.|.. ...+.|.+.
T Consensus 83 a~n~~g~~~~~~~l~V~ 99 (108)
T 3kvq_A 83 ACSVLGCAKVEAFFIIE 99 (108)
T ss_dssp EC----CEEEEEEEEEE
T ss_pred EEeCCCceEEEEEEEEe
Confidence 99986 334455553
No 196
>4dzb_B Vbeta2 (MAIT T cell receptor); immune system; 1.70A {Homo sapiens} PDB: 1ymm_E* 3o4l_E* 3o6f_D 3t0e_D 1ktk_E 3mfg_B 2ij0_E
Probab=99.51 E-value=1.4e-13 Score=105.44 Aligned_cols=132 Identities=15% Similarity=0.221 Sum_probs=85.9
Q ss_pred ceeeEEeEEEEEeCCcEEEEeecCCCCCCcceeeEEeeCC---------------CceeeecC--Cc-----------eE
Q psy12724 12 YYEAQVYDVFVIKGNAAVFKCNLPSFVSDHLDVVSWADTD---------------GGQYQIDN--QD-----------FV 63 (167)
Q Consensus 12 ~~~~~~~~~~v~~G~~~~l~C~a~~~~~~~~~~i~W~k~~---------------~~~~~~~~--~~-----------~v 63 (167)
.+...+..+.+.+|+++.|.|.+.+.+. +.|.|+|.. +....... .| .+
T Consensus 3 ~v~~~p~~~~v~~G~~v~L~C~~~~~~~---~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~L 79 (246)
T 4dzb_B 3 VVSQHPSWVISKSGTSVKIECRSLDFQA---TTMFWYRQFPKQSLMLMATSNEGSKATYEQGVEKDKFLINHASLTLSTL 79 (246)
T ss_dssp CEEEECSEEEEETTSCEEEEEEESSSCC---CSEEEEEECTTSCCEEEEEECTTSCCEECTTCCGGGEEEEEEETTEEEE
T ss_pred ccEECCcEEEEeCCCcEEEEeEecCCCc---eEEEEEEECCCCCcEEEEEEccCCCceecCcccCCcEEEEecCCCEEEE
Confidence 3566788899999999999999988754 479999821 11010000 01 11
Q ss_pred --------EEeeeEEEecC--------------eEE----------------------EeCCcEEEEeeeCCccCCcce-
Q psy12724 64 --------VSQSYTVNIMD--------------EHV----------------------LKGNSAVLKCHIPSFVADYVA- 98 (167)
Q Consensus 64 --------~~g~y~c~~~~--------------~~v----------------------~~G~~a~l~C~~~~~~~~p~p- 98 (167)
.+|.|.|.+.+ ..| .+|+++.|.|.+.+. .|.|
T Consensus 80 ~I~~v~~~D~G~Y~C~~~~~~~~~~~~~~~~~~l~V~~~~~~~~~P~i~~~~~~~~~~~~g~~v~L~C~~~g~--~p~~~ 157 (246)
T 4dzb_B 80 TVTSAHPEDSSFYICSARTSGDFGEQFFGPGTRLTVLEDLKNVFPPEVAVFEPSEAEISHTQKATLVCLATGF--YPDHV 157 (246)
T ss_dssp EECSCCGGGCEEEEEEECCSSGGGCCEECCCEEEEEESCGGGCBCCEEEEECCCHHHHHHHSEEEEEEEEEEE--BSSCE
T ss_pred EECCCCHHHCEEEEEEEecCCCCcceEEcCCEEEEEecCCCcccCCceEeecCCchhccCCCcEEEEEEEccC--cCCce
Confidence 27999999852 011 128999999999754 1322
Q ss_pred eEEEEeCCCeeeEEeeeec----------CCceEEEccCCeEEEeecCcCC-CCcceEEEeeecC
Q psy12724 99 VESWISDQGEELFVDMTES----------TDGKYLVLPSGELHIRDVGPED-GYKSYQCRTKHRL 152 (167)
Q Consensus 99 ~i~W~k~~~~~l~~~~~~~----------~~~r~~~~~~g~L~I~~v~~~D-~~G~Y~C~a~n~~ 152 (167)
.++|+||+ ..+....... .++.|.+. ..|.|.....+| . |.|+|.|.|..
T Consensus 158 ~v~W~k~g-~~l~~~~~~~~~~~~~~~~~~~g~~~~~--s~l~i~~~~~~d~~-g~YtC~v~~~~ 218 (246)
T 4dzb_B 158 ELSWWVNG-KEVHSGVCTDPQPLKEQPALNDSRYALS--SRLRVSATFWQNPR-NHFRCQVQFYG 218 (246)
T ss_dssp EEEEEETT-EEECTTEEECSSCEESSTTSTTCCEEEE--EEEEEEHHHHTCTT-CEEEEEEEECC
T ss_pred EEEEEECC-EECCCCcccccccccccccCCCCCEEEE--EEEEECHHHhccCC-CeEEEEEEecC
Confidence 89999987 5553110000 12333332 248999999999 8 99999999986
No 197
>1qgc_4 Protein (immunoglobulin); virus-antibody complex, icosahedral virus, virus-immune SYST complex; 30.00A {Mus musculus} SCOP: i.6.1.1
Probab=99.50 E-value=6.9e-14 Score=115.08 Aligned_cols=134 Identities=19% Similarity=0.301 Sum_probs=88.9
Q ss_pred eeeEEeEEEEEeCCcEEEEeecCCCCCC-cceeeEEeeCC-Ccee---e-------ec-CCc----------eE------
Q psy12724 13 YEAQVYDVFVIKGNAAVFKCNLPSFVSD-HLDVVSWADTD-GGQY---Q-------ID-NQD----------FV------ 63 (167)
Q Consensus 13 ~~~~~~~~~v~~G~~~~l~C~a~~~~~~-~~~~i~W~k~~-~~~~---~-------~~-~~~----------~v------ 63 (167)
+...|.++.|.+|+++.|.|.+.+.+.+ ..+.+.|+|++ +..+ . .. ..| .+
T Consensus 4 v~~~p~~~~v~~G~~v~L~C~~~~~~~~~~~~~v~W~k~~~g~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~ 83 (438)
T 1qgc_4 4 LTQSPASLAVSLGQRATISCRASESVDSSGHSFMHWYQQKPGQPPKLLIYRASNLESGIPDRFSGSGSRTDFTLTIDPVE 83 (438)
T ss_dssp EEEECSEEEECTTSCEEEEEEESSCCEETTEECEEEEEECTTSCCEEEESSSSCBCSSCCTTEEEEEETTEEEEEESSCC
T ss_pred eEecCCeEEeeCCCCEEEEEecCCCcccCCcceEEEEEECCCCCcEEEEEECcccCCCccCcEEEEccCCcEEEEeCCCc
Confidence 4566888999999999999999877631 01369999964 2211 0 00 011 11
Q ss_pred --EEeeeEEEecCe----------------------EE-------EeCCcEEEEeeeCCccCCcce-eEEEEeCCCeeeE
Q psy12724 64 --VSQSYTVNIMDE----------------------HV-------LKGNSAVLKCHIPSFVADYVA-VESWISDQGEELF 111 (167)
Q Consensus 64 --~~g~y~c~~~~~----------------------~v-------~~G~~a~l~C~~~~~~~~p~p-~i~W~k~~~~~l~ 111 (167)
.+|.|+|.+.+. .+ .+|+.+.|.|.+.+. .|.| .++|+||+ ..+.
T Consensus 84 ~~D~G~Y~C~a~n~~~~~~~~~~~l~V~~~~~~P~v~~~~~~~~~~~g~~~~l~C~~~g~--~p~~~~v~W~k~g-~~~~ 160 (438)
T 1qgc_4 84 ADDVATYYCQQSNEVPLTFGAGTKLDLKRADAAPTVSIFPPSSEQLTSGGASVVCFLNNF--YPKDINVKWKIDG-SERQ 160 (438)
T ss_dssp GGGCEEEEEEECSSTTCCBCCCEEEEECCCCBCCEEEEECCCHHHHHTTEEEEEEEEEEE--BSSCEEEEEEETT-EEEC
T ss_pred CcCCeeEEEEEecCCCccccCceeEEecCCCCCCEEEecCCChhhccCCceEEEEEEccc--cCCCcEEEEEECC-EEcC
Confidence 279999987431 01 138899999999752 4777 89999987 4543
Q ss_pred Ee-e-----eecCCceEEEccCCeEEEeecCcCCCCcceEEEeeecC
Q psy12724 112 VD-M-----TESTDGKYLVLPSGELHIRDVGPEDGYKSYQCRTKHRL 152 (167)
Q Consensus 112 ~~-~-----~~~~~~r~~~~~~g~L~I~~v~~~D~~G~Y~C~a~n~~ 152 (167)
.. . ....+++|.. .+.|.|.+++.+|+ |.|+|.|.|..
T Consensus 161 ~~~~~~~~~~~~~~~~~~~--~~~L~i~~~~~~d~-G~Y~C~a~n~~ 204 (438)
T 1qgc_4 161 NGVLNSWTDQDSKDSTYSM--SSTLTLTKDEYERH-NSYTCEATHKT 204 (438)
T ss_dssp TTEEEEEECCCTTTCCEEE--EEEEEEEHHHHHTC-CEEEEEEEETT
T ss_pred CCceeccccccCCCCcEEE--EEEEEEeCcccCCC-CeEEEEEEecc
Confidence 11 0 0011223322 34799999999999 99999999986
No 198
>2dm2_A Palladin; beta-sandwich, KIAA0992, actin-associated scaffold, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.50 E-value=5.8e-14 Score=95.59 Aligned_cols=73 Identities=14% Similarity=0.340 Sum_probs=58.3
Q ss_pred EEecCeEEEeCCcEEEEeeeCCccCCcceeEEEEeCCCeeeEEeeeecCCceEEEcc--CC--eEEEeecCcCCCCcceE
Q psy12724 70 VNIMDEHVLKGNSAVLKCHIPSFVADYVAVESWISDQGEELFVDMTESTDGKYLVLP--SG--ELHIRDVGPEDGYKSYQ 145 (167)
Q Consensus 70 c~~~~~~v~~G~~a~l~C~~~~~~~~p~p~i~W~k~~~~~l~~~~~~~~~~r~~~~~--~g--~L~I~~v~~~D~~G~Y~ 145 (167)
..+.+..+.+|+++.|.|.+.+ .|.|.++|+|++ ..+.. ...++.+.. +| .|.|.+++.+|+ |.|+
T Consensus 13 ~~~~~~~v~~G~~v~l~C~~~g---~p~p~v~W~k~g-~~~~~-----~~~~~~~~~~~~~~~~L~i~~v~~~D~-G~Y~ 82 (110)
T 2dm2_A 13 MKLKHYKIFEGMPVTFTCRVAG---NPKPKIYWFKDG-KQISP-----KSDHYTIQRDLDGTCSLHTTASTLDDD-GNYT 82 (110)
T ss_dssp SCCCCEEEETTCCEEEEEEBCC---SSCCEEEEECSS-CBCCT-----TCSSEEEEECTTCEEEEEESSCCTTTC-SCCE
T ss_pred ecCcCeEEeCCCeEEEEEEEEe---cCCCEEEEEECC-EECCC-----CCCeEEEEECCCcEEEEEECCCChhhC-EEEE
Confidence 3445678899999999999984 588999999997 45531 245665553 45 699999999999 9999
Q ss_pred EEeeecC
Q psy12724 146 CRTKHRL 152 (167)
Q Consensus 146 C~a~n~~ 152 (167)
|.|.|..
T Consensus 83 C~a~N~~ 89 (110)
T 2dm2_A 83 IMAANPQ 89 (110)
T ss_dssp EEEECTT
T ss_pred EEEEECC
Confidence 9999987
No 199
>2j6e_L IGM, FAB light chain; autoimmune complex human IGM rheumatoid factor IGG1-FC, immunoglobulin C region, membrane, glycoprotein, transmembrane; HET: NAG FUL BMA MAN NDG GAL; 3.0A {Homo sapiens} SCOP: b.1.1.1 b.1.1.2
Probab=99.50 E-value=7.4e-15 Score=111.45 Aligned_cols=129 Identities=19% Similarity=0.268 Sum_probs=83.2
Q ss_pred EeEEEEEeCCcEEEEeecCCCCCCcceeeEEeeCC-Ccee---ee-------c-CCc----------eE--------EEe
Q psy12724 17 VYDVFVIKGNAAVFKCNLPSFVSDHLDVVSWADTD-GGQY---QI-------D-NQD----------FV--------VSQ 66 (167)
Q Consensus 17 ~~~~~v~~G~~~~l~C~a~~~~~~~~~~i~W~k~~-~~~~---~~-------~-~~~----------~v--------~~g 66 (167)
|..+.+.+|+++.|.|.+.+.+.++ ..+.|+|++ +..+ .. . ..| .+ .+|
T Consensus 26 p~~~~v~~G~~v~L~C~~~~~~~~~-~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~D~G 104 (234)
T 2j6e_L 26 PPSASGTPGQRVTISCSGSSSNIGS-NYVYWYQQLPGTAPKLLIYRNNQRPSGVPDRFSGSKSGTSASLAISGLRSEDEA 104 (234)
T ss_dssp CSCCCBCTTCEEEEEEECCTTTTTT-SCCEEEEECSSSCCEEEEBTTTBCCSSSCTTEEEEEETTEEEEEEESCCSTTCS
T ss_pred CCcEEeeCCCcEEEEEEecCCCCCC-CeEEEEEecCCCCcEEEEECccccCCCccccEEEEecCCeEEEEECCCCHHHCE
Confidence 7888899999999999998765431 159999864 2111 00 0 011 11 179
Q ss_pred eeEEEecCe-------------------------EE-------EeCCcEEEEeeeCCccCCcc-eeEEEEeCCCeeeEEe
Q psy12724 67 SYTVNIMDE-------------------------HV-------LKGNSAVLKCHIPSFVADYV-AVESWISDQGEELFVD 113 (167)
Q Consensus 67 ~y~c~~~~~-------------------------~v-------~~G~~a~l~C~~~~~~~~p~-p~i~W~k~~~~~l~~~ 113 (167)
.|.|.+.+. .+ ..|+++.|.|.+.+. .|. +.++|+||+ ..+...
T Consensus 105 ~Y~C~~~~~~~~~~~~~~~~~l~V~~~~~~~p~v~~~~~~~~~~~g~~v~L~C~~~g~--~p~~~~v~W~k~g-~~l~~~ 181 (234)
T 2j6e_L 105 DYYCATWDDSLSAVIFGGGTKLTVLGQPKAAPSVTLFPPSSEELQANKATLVCLISDF--FPGAVTVAWKADG-APVKAG 181 (234)
T ss_dssp EEEEEEEETTTTEEEECCCBCCCBCCCCCCCCCCCEECCCHHHHTTSCCCEEECCCBC--SSCCCEEEEEETT-EECCSS
T ss_pred EEEEEEEcCCcceeEecCCEEEEEecCCCCCCcccccCCChhHhcCCceEEEEEEEEE--cCCceEEEEEECC-EECCCC
Confidence 999987420 01 247899999999853 244 489999997 554211
Q ss_pred ee-----ecCCceEEEccCCeEEEeecCcCCCCcceEEEeeecC
Q psy12724 114 MT-----ESTDGKYLVLPSGELHIRDVGPEDGYKSYQCRTKHRL 152 (167)
Q Consensus 114 ~~-----~~~~~r~~~~~~g~L~I~~v~~~D~~G~Y~C~a~n~~ 152 (167)
.. ...++.|. ..+.|.|.+++.+|+ |.|+|.|.|..
T Consensus 182 ~~~~~~~~~~~~~~~--~~s~L~i~~~~~~d~-G~Y~C~a~n~~ 222 (234)
T 2j6e_L 182 VETTKPSKQSNNKYA--ASSYLSLTPEQWKSH-RSYSCQVTHEG 222 (234)
T ss_dssp EEECCCCCCTTSCCB--CCEEECCCGGGTTTS-CCEEEEEEBTT
T ss_pred ccccCceECCCCCEE--EEEEEEECHHHcCCC-CeEEEEEEeCC
Confidence 00 00111111 123699999999998 99999999986
No 200
>1nct_A Titin; cell adhesion, glycoprotein, transmembrane, repeat, brain, immunoglobulin fold, alternative splicing, signal, muscle protein; NMR {Homo sapiens} SCOP: b.1.1.4 PDB: 1ncu_A 1tnm_A 1tnn_A
Probab=99.50 E-value=1.1e-14 Score=99.43 Aligned_cols=82 Identities=20% Similarity=0.289 Sum_probs=63.7
Q ss_pred eEEEecCeEEEeCCcEEEEeeeCCccCCcceeEEEEeCCCeeeEEeeeecCCceEEEcc---CCeEEEeecCcCCCCcce
Q psy12724 68 YTVNIMDEHVLKGNSAVLKCHIPSFVADYVAVESWISDQGEELFVDMTESTDGKYLVLP---SGELHIRDVGPEDGYKSY 144 (167)
Q Consensus 68 y~c~~~~~~v~~G~~a~l~C~~~~~~~~p~p~i~W~k~~~~~l~~~~~~~~~~r~~~~~---~g~L~I~~v~~~D~~G~Y 144 (167)
+...+.+..+.+|+++.|.|.+. |.|.|.++|+|++ ..+. ...++.+.. ++.|.|.+++.+|+ |.|
T Consensus 17 i~~~p~~~~v~~G~~v~L~C~~~---g~p~p~v~W~k~g-~~l~------~~~~~~~~~~~~~~~L~I~~v~~~D~-G~Y 85 (106)
T 1nct_A 17 ILTKPRSMTVYEGESARFSCDTD---GEPVPTVTWLRKG-QVLS------TSARHQVTTTKYKSTFEISSVQASDE-GNY 85 (106)
T ss_dssp EEECCCCEEESSSSCEECCEEEE---CSSCCBCCBCSSS-SCCT------TCSSEEEEECSSEEEEEECCCCSSCC-SEE
T ss_pred EEECCCCEEEeCCCcEEEEEEEE---EcCCCEEEEEECC-EECC------CCCCEEEEECCCEEEEEECcCCchhC-EEE
Confidence 44556678899999999999997 4588999999997 4542 345666554 35899999999999 999
Q ss_pred EEEeeecC---cceEEEee
Q psy12724 145 QCRTKHRL---TGETRLSA 160 (167)
Q Consensus 145 ~C~a~n~~---~~~~~l~~ 160 (167)
+|.|.|.. +..+.|.+
T Consensus 86 ~C~a~N~~G~~~~~~~l~V 104 (106)
T 1nct_A 86 SVVVENSEGKQEAEFTLTI 104 (106)
T ss_dssp EECCBCSSCBCCEEEEEEE
T ss_pred EEEEEeCCCeEEEEEEEEE
Confidence 99999987 33445544
No 201
>2dav_A SLOW MYBP-C, myosin-binding protein C, SLOW-type; IG domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.1.1.4
Probab=99.50 E-value=2.7e-14 Score=101.50 Aligned_cols=89 Identities=10% Similarity=0.078 Sum_probs=62.3
Q ss_pred eeEEEecCeEEEeCCcEEEEeeeCCccCCcceeEEEEeCCCeeeEEeeeecCCceEEEc---------cCCeEEEeecCc
Q psy12724 67 SYTVNIMDEHVLKGNSAVLKCHIPSFVADYVAVESWISDQGEELFVDMTESTDGKYLVL---------PSGELHIRDVGP 137 (167)
Q Consensus 67 ~y~c~~~~~~v~~G~~a~l~C~~~~~~~~p~p~i~W~k~~~~~l~~~~~~~~~~r~~~~---------~~g~L~I~~v~~ 137 (167)
.|.-.+++..+.+|++|+|.|.+.+..+.|.|.|+|+|+.-..+.. ..+.++.+. .+..|.|++++.
T Consensus 9 ~F~~~P~~v~V~eG~~v~L~C~v~g~~~~p~P~V~W~Kgk~~~~~~----~~~~~~~~~~~~~~~~~~~~~~L~I~~v~~ 84 (126)
T 2dav_A 9 LFIEKPQGGTVKVGEDITFIAKVKAEDLLRKPTIKWFKGKWMDLAS----KAGKHLQLKETFERHSRVYTFEMQIIKAKD 84 (126)
T ss_dssp SCCSCCCCCEEETTCCEEEEEEEECCCSSSCCEEEEEESSSCCHHH----HTTSSEEEEEEEETTTTEEEEEEEECSCCT
T ss_pred EEEEcCCCeEEeCCCCEEEEEEEeccCCCCCCcEEEeeCcCcccCC----CCCceEEEccccccccccceEEEEEccCCc
Confidence 4666678889999999999999875323589999999974111100 012223221 136799999999
Q ss_pred CCCCcceEEEeeecC---cceEEEee
Q psy12724 138 EDGYKSYQCRTKHRL---TGETRLSA 160 (167)
Q Consensus 138 ~D~~G~Y~C~a~n~~---~~~~~l~~ 160 (167)
+|+ |.|+|.|.|.. +..+.|++
T Consensus 85 ~Da-G~Y~Cevsn~~g~~~~~~~L~V 109 (126)
T 2dav_A 85 NFA-GNYRCEVTYKDKFDSCSFDLEV 109 (126)
T ss_dssp TSC-EEEEEEEECSSCEEEECCEEEE
T ss_pred ccC-EEEEEEEEeCCCcEEEEEEEEE
Confidence 999 99999999987 33445554
No 202
>2dru_A Chimera of CD48 antigen and T-cell surface antige; CD2 binding domain of CD48, immune system; HET: NAG; 2.60A {Rattus norvegicus}
Probab=99.49 E-value=5.3e-13 Score=99.07 Aligned_cols=118 Identities=14% Similarity=0.234 Sum_probs=79.5
Q ss_pred EeEEEEEeCCcEEEEeecCCCCCCcceeeEEeeCCCceeee-----------cC--Cce--------E--------EEee
Q psy12724 17 VYDVFVIKGNAAVFKCNLPSFVSDHLDVVSWADTDGGQYQI-----------DN--QDF--------V--------VSQS 67 (167)
Q Consensus 17 ~~~~~v~~G~~~~l~C~a~~~~~~~~~~i~W~k~~~~~~~~-----------~~--~~~--------v--------~~g~ 67 (167)
.+.+.+.+|+++.|.|.+.. +.+ .+.|.|.|++...+.. .. .|. + .+|.
T Consensus 6 ~~~v~v~~G~~vtL~c~~~~-~~~-~~~i~W~k~~~~~i~~~~~~~~~~~~~~~~~~R~~l~~~~~sL~I~~v~~~D~G~ 83 (180)
T 2dru_A 6 VPNVNAITGSNVTLTILKHP-LAS-YQRLTWLHTTNQKILEYFPNGKKTVFESVFKDRVDLDKTNGALRIYNVSKEDRGD 83 (180)
T ss_dssp CCEEEEETTSCEEECCCSSC-CCS-CSEEEEESSSSCEEEEECSSSCEEECSSTTTTTEEECTTTCCEEECSCCGGGCEE
T ss_pred cceEEEEeCCCEEEeCCCCC-CCc-eeEEEEEecCCeEEEEEECCCCeeEcchhcCCeEEEeCCCccEEEcCCCHHHCeE
Confidence 45788999999999999854 222 4589999953222210 00 121 1 2799
Q ss_pred eEEEecCe-------------------EEEeCCcEEEEeeeCCccCCcceeEEEEeCCCeeeEEeeeecCCceEEEccCC
Q psy12724 68 YTVNIMDE-------------------HVLKGNSAVLKCHIPSFVADYVAVESWISDQGEELFVDMTESTDGKYLVLPSG 128 (167)
Q Consensus 68 y~c~~~~~-------------------~v~~G~~a~l~C~~~~~~~~p~p~i~W~k~~~~~l~~~~~~~~~~r~~~~~~g 128 (167)
|+|.+.+. ....++++.|.|.+.. + |.|.++|+|++ ..+. . ..+.
T Consensus 84 Y~C~v~~~~~~~~~~~L~V~~~~~~P~i~~~~~~v~L~C~~~~--g-p~p~i~W~~~~-~~l~-~-----------~~~~ 147 (180)
T 2dru_A 84 YYMRMLHETEDQWKITMEVYEMVSKPMIYWECSNATLTCEVLE--G-TDVELKLYQGK-EHLR-S-----------LRQK 147 (180)
T ss_dssp EEEEEESSSEEEEEEEEEEECCCCCCEEEEEGGGTEEEEECSS--C-TTCEEEEEETT-EEEE-E-----------ESSS
T ss_pred EEEEEEcCCeEEEEEEEEEECCCCCCEEEecCCCEEEEEEeCC--C-CCCEEEEEECC-eECc-C-----------CCCC
Confidence 99986321 1135778999999953 3 88999999997 4442 1 1245
Q ss_pred eEEEeecCcCCCCcceEEEeeecCcce
Q psy12724 129 ELHIRDVGPEDGYKSYQCRTKHRLTGE 155 (167)
Q Consensus 129 ~L~I~~v~~~D~~G~Y~C~a~n~~~~~ 155 (167)
.|.|.. .+|+ |.|+|.|.|.++..
T Consensus 148 ~l~~~~--~~d~-g~Y~C~a~N~~~~~ 171 (180)
T 2dru_A 148 TMSYQW--TNLR-APFKCKAVNRVSQE 171 (180)
T ss_dssp EEEEEC--SCCS-SCEEEEEEETTEEE
T ss_pred EEEEEE--hhcC-ccEEEEEecCcCcc
Confidence 666633 7898 99999999998543
No 203
>1hnf_A CD2; T lymphocyte adhesion glycoprotein; HET: NAG; 2.50A {Homo sapiens} SCOP: b.1.1.1 b.1.1.3 PDB: 1cdb_A 1gya_A* 1qa9_A
Probab=99.49 E-value=5.4e-13 Score=99.70 Aligned_cols=118 Identities=11% Similarity=0.220 Sum_probs=78.6
Q ss_pred EeEEEEEeCCcEEEEeecCCCCCCcceeeEEee--CCCceee---------ecCCce---------E------EEeeeEE
Q psy12724 17 VYDVFVIKGNAAVFKCNLPSFVSDHLDVVSWAD--TDGGQYQ---------IDNQDF---------V------VSQSYTV 70 (167)
Q Consensus 17 ~~~~~v~~G~~~~l~C~a~~~~~~~~~~i~W~k--~~~~~~~---------~~~~~~---------v------~~g~y~c 70 (167)
.+.+.+.+|+++.|.|.+..... ..+.|.|.| ++. .+. +...|. + .+|.|+|
T Consensus 6 ~~~v~g~~G~sv~L~~~~~~~~~-~~~~i~W~k~~~~~-~i~~~~~~~~~~~~~~R~~~~~ngsL~I~~v~~~DsG~Y~c 83 (182)
T 1hnf_A 6 ALETWGALGQDINLDIPSFQMSD-DIDDIKWEKTSDKK-KIAQFRKEKETFKEKDTYKLFKNGTLKIKHLKTDDQDIYKV 83 (182)
T ss_dssp CEEEEEETTSCEEECCTTCCCCS-SEEEEEEEEGGGCC-EEEEECGGGCEEESCTTEEECTTSCEEECSCCGGGCEEEEE
T ss_pred ccEEEEecCCCEEEeCCcccccC-cCCEEEEEECCCCc-EEEEEeCccCCCCCCCeEEECCCCCEEECCCChhhCEEEEE
Confidence 45688999999999996543222 257899999 643 331 112221 1 2799999
Q ss_pred EecC------------eEE----------EeCCcEEEEeeeCCccCCcceeEEEEeCCCeeeEEeeeecCCceEEEccCC
Q psy12724 71 NIMD------------EHV----------LKGNSAVLKCHIPSFVADYVAVESWISDQGEELFVDMTESTDGKYLVLPSG 128 (167)
Q Consensus 71 ~~~~------------~~v----------~~G~~a~l~C~~~~~~~~p~p~i~W~k~~~~~l~~~~~~~~~~r~~~~~~g 128 (167)
.+.+ ..| ..+.++.|.|.+.+ .|.|.++|++++ ..+ .. .+.
T Consensus 84 ~~~n~~g~~~~~~~~~L~V~~~~~~P~i~~~~~~v~L~C~~~~---~p~~~~~W~~~g-~~l-~~------------~~~ 146 (182)
T 1hnf_A 84 SIYDTKGKNVLEKIFDLKIQERVSKPKISWTCINTTLTCEVMN---GTDPELNLYQDG-KHL-KL------------SQR 146 (182)
T ss_dssp EEEETTSCEEEEEEEEEEEECCCCCCEEEEETTTTEEEEECSS---CSSCEEEEEESS-CEE-EE------------ESS
T ss_pred EEEeCCCceeEEEEEEEEEcCcCCCCEEEEccCcEEEEeEccC---CCCCEEEEEECC-EEC-CC------------CCc
Confidence 8743 011 13558999999984 478899999997 444 21 123
Q ss_pred eEEEeecCcCCCCcceEEEeeecCcce
Q psy12724 129 ELHIRDVGPEDGYKSYQCRTKHRLTGE 155 (167)
Q Consensus 129 ~L~I~~v~~~D~~G~Y~C~a~n~~~~~ 155 (167)
.|.+.. ..+|+ |.|+|.|.|.++..
T Consensus 147 ~i~~~~-~~~d~-G~Y~C~a~N~~~~~ 171 (182)
T 1hnf_A 147 VITHKW-TTSLS-AKFKCTAGNKVSKE 171 (182)
T ss_dssp CEEEEC-CSCEE-EEEEEEEECSSCEE
T ss_pred EEEEec-ccCCC-cEEEEEEEeCCCCc
Confidence 344443 57898 99999999998543
No 204
>2edn_A Myosin-binding protein C, fast-type; beta-sandwich, IG-fold, fast MYBP-C, C-protein, skeletal muscle fast isoform, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.49 E-value=1.7e-14 Score=101.42 Aligned_cols=90 Identities=17% Similarity=0.131 Sum_probs=63.1
Q ss_pred eeeEEEecCeEEEeCCcEEEEeeeCCccCCcceeEEEEeCCCeeeEEeeeecCCceEEEc---------cCCeEEEeecC
Q psy12724 66 QSYTVNIMDEHVLKGNSAVLKCHIPSFVADYVAVESWISDQGEELFVDMTESTDGKYLVL---------PSGELHIRDVG 136 (167)
Q Consensus 66 g~y~c~~~~~~v~~G~~a~l~C~~~~~~~~p~p~i~W~k~~~~~l~~~~~~~~~~r~~~~---------~~g~L~I~~v~ 136 (167)
+.|.-.+++..|.+|++|+|.|.+.+..+.|.|.|+|+|+.-..+.. ..+.++.+. .++.|.|+++.
T Consensus 13 ~~f~~~P~~v~V~eG~~v~L~C~v~g~~~~p~P~V~W~Kgk~~~~~~----~~~~~~~~~~~~~~~~~~~~~~L~I~~v~ 88 (118)
T 2edn_A 13 GVFLKKPDSVSVETGKDAVVVAKVNGKELPDKPTIKWFKGKWLELGS----KSGARFSFKESHNSASNVYTVELHIGKVV 88 (118)
T ss_dssp SSCSBCCCCCEEETTSCEECCEEEETTTSSSCCCCEEEETTTCCCCC----STTSSCEEEEEECSSSCEEEEEEEESSCC
T ss_pred ceEEECCCCeEEeCCCCEEEEEEEeccCCCCCCcEEEeeCCEeccCC----CCccEEEeccccccccccceEEEEEeeCC
Confidence 34666778899999999999999975323489999999974111110 012223221 14679999999
Q ss_pred cCCCCcceEEEeeecC---cceEEEee
Q psy12724 137 PEDGYKSYQCRTKHRL---TGETRLSA 160 (167)
Q Consensus 137 ~~D~~G~Y~C~a~n~~---~~~~~l~~ 160 (167)
.+|+ |.|+|.|.|.. +..+.|++
T Consensus 89 ~~D~-G~Y~Cevsn~~g~~s~~~~L~V 114 (118)
T 2edn_A 89 LGDR-GYYRLEVKAKDTCDSCGFNIDV 114 (118)
T ss_dssp TTTC-SCEEEEEECSSCEEEEEECCEE
T ss_pred hhhC-EEEEEEEEEcCCcEEEEEEEEE
Confidence 9999 99999999988 33444444
No 205
>2dm3_A KIAA0992 protein, palladin; beta-sandwich, myopalladin, actin-associated scaffold, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.49 E-value=3.6e-14 Score=96.39 Aligned_cols=76 Identities=25% Similarity=0.343 Sum_probs=57.7
Q ss_pred eEEEecCeEEEeCCcEEEEeeeCCccCCcceeEEEEeCCCeeeEEeeeecCCceEEEccCC--eEEEeecCcCCCCcceE
Q psy12724 68 YTVNIMDEHVLKGNSAVLKCHIPSFVADYVAVESWISDQGEELFVDMTESTDGKYLVLPSG--ELHIRDVGPEDGYKSYQ 145 (167)
Q Consensus 68 y~c~~~~~~v~~G~~a~l~C~~~~~~~~p~p~i~W~k~~~~~l~~~~~~~~~~r~~~~~~g--~L~I~~v~~~D~~G~Y~ 145 (167)
+...+.+..+.+|+++.|.|.+. +.|.|.++|+|++ ..+... ...++....++ .|.|.+++.+|+ |.|+
T Consensus 12 i~~~~~~~~v~~G~~v~l~C~~~---g~p~p~v~W~~~g-~~~~~~----~~~~~~~~~~~~~~L~i~~v~~~D~-G~Y~ 82 (110)
T 2dm3_A 12 FLQAPGDLTVQEGKLCRMDCKVS---GLPTPDLSWQLDG-KPVRPD----SAHKMLVRENGVHSLIIEPVTSRDA-GIYT 82 (110)
T ss_dssp EEECCCEEEEESSSCBCCEEEEE---CSSCCEEECBBSS-SBCCCC----SSEEEEECTTSCEEEEESSCCGGGC-SBBC
T ss_pred EEeCCCcEEEeCCCEEEEEEEEE---EcCCCEEEEEECC-EECCCC----CceEEEEecCCeEEEEEeeCCcccC-EEEE
Confidence 33344567889999999999997 4588999999997 455321 12233333444 799999999999 9999
Q ss_pred EEeeecC
Q psy12724 146 CRTKHRL 152 (167)
Q Consensus 146 C~a~n~~ 152 (167)
|.|.|..
T Consensus 83 C~a~n~~ 89 (110)
T 2dm3_A 83 CIATNRA 89 (110)
T ss_dssp EEEECSS
T ss_pred EEEECCC
Confidence 9999987
No 206
>1wit_A Twitchin 18TH IGSF module; immunoglobulin superfamily, I SET, muscle protein; NMR {Caenorhabditis elegans} SCOP: b.1.1.4 PDB: 1wiu_A
Probab=99.48 E-value=5.3e-14 Score=93.10 Aligned_cols=70 Identities=13% Similarity=0.178 Sum_probs=53.6
Q ss_pred cCeEEEeCCcEEEEeeeCCccCCcceeEEEEeCC-CeeeEEeeeecCCceEEE-ccCCeEEEeecCcCCCCcceEEEeee
Q psy12724 73 MDEHVLKGNSAVLKCHIPSFVADYVAVESWISDQ-GEELFVDMTESTDGKYLV-LPSGELHIRDVGPEDGYKSYQCRTKH 150 (167)
Q Consensus 73 ~~~~v~~G~~a~l~C~~~~~~~~p~p~i~W~k~~-~~~l~~~~~~~~~~r~~~-~~~g~L~I~~v~~~D~~G~Y~C~a~n 150 (167)
.+..+.+|+++.|.|.+. |.|.|.++|+|++ +..+. ...+... ...+.|.|.+++.+|+ |.|+|.|.|
T Consensus 10 ~~~~v~~G~~~~l~C~~~---g~P~p~i~W~k~~~~~~~~------~~~~~~~~~~~~~L~i~~~~~~D~-G~Y~C~a~N 79 (93)
T 1wit_A 10 RKIKIKAGFTHNLEVDFI---GAPDPTATWTVGDSGAALA------PELLVDAKSSTTSIFFPSAKRADS-GNYKLKVKN 79 (93)
T ss_dssp CEEEECTTBCCEEEEEEE---CCSSCEEEEECSTTTCBCS------TTSEEEEETTEEEEECTTBCGGGC-EEEEEEEEE
T ss_pred CceEEeCCCEEEEEEEEE---EcCCCEEEEEECCCCcccC------CcEEEEecCCEEEEEECCCChhcC-EEEEEEEEc
Confidence 456788999999999998 4599999999997 22331 1222222 1235799999999999 999999999
Q ss_pred cC
Q psy12724 151 RL 152 (167)
Q Consensus 151 ~~ 152 (167)
..
T Consensus 80 ~~ 81 (93)
T 1wit_A 80 EL 81 (93)
T ss_dssp TT
T ss_pred CC
Confidence 87
No 207
>1x44_A Myosin-binding protein C, SLOW-type; IG-like domain, SLOW- type/skeletal muscle SLOW-isoform, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.1.1.4
Probab=99.48 E-value=6.9e-14 Score=94.35 Aligned_cols=78 Identities=21% Similarity=0.326 Sum_probs=60.1
Q ss_pred EecCeEEEeCCcEEEEeeeCCccCCcceeEEEEeCCCeeeEEeeeecCCc--eEEEccC---CeEEEeecCcCCCCcceE
Q psy12724 71 NIMDEHVLKGNSAVLKCHIPSFVADYVAVESWISDQGEELFVDMTESTDG--KYLVLPS---GELHIRDVGPEDGYKSYQ 145 (167)
Q Consensus 71 ~~~~~~v~~G~~a~l~C~~~~~~~~p~p~i~W~k~~~~~l~~~~~~~~~~--r~~~~~~---g~L~I~~v~~~D~~G~Y~ 145 (167)
.+.+..+.+|+++.|.|.+. + |.|.++|+||+ ..+.. +. ||.+..+ ..|.|.+++.+|+ |.|+
T Consensus 13 ~~~~~~v~~G~~v~l~C~~~---~-~~~~v~W~k~g-~~l~~------~~~~~~~~~~~~~~~~L~I~~~~~~D~-G~Y~ 80 (103)
T 1x44_A 13 QLEDTTAYCGERVELECEVS---E-DDANVKWFKNG-EEIIP------GPKSRYRIRVEGKKHILIIEGATKADA-AEYS 80 (103)
T ss_dssp CCCCEEEETTEEEEEEEECS---S-SSCCCEEEETT-EECCC------STTCSEEEEEETTEEEEEEEEECTTTC-SEEE
T ss_pred cCCCEEEECCCCEEEEEEec---C-CCCeEEEEECC-EECCC------CCceEEEEEEcCCEEEEEECCCCcccC-EEEE
Confidence 34567889999999999996 3 66889999997 55532 33 6666654 4799999999999 9999
Q ss_pred EEeeecCcceEEEeee
Q psy12724 146 CRTKHRLTGETRLSAT 161 (167)
Q Consensus 146 C~a~n~~~~~~~l~~~ 161 (167)
|.|.|. +..+.|.+.
T Consensus 81 C~a~n~-~~~~~l~V~ 95 (103)
T 1x44_A 81 VMTTGG-QSSAKLSVD 95 (103)
T ss_dssp EEETTE-EEEEEEEEE
T ss_pred EEECCC-cEEEEEEEe
Confidence 999994 455566553
No 208
>3nfj_J T cell receptor beta chain; immunoglobulin family, immune system; 2.68A {Homo sapiens} PDB: 3hg1_E
Probab=99.47 E-value=7.8e-13 Score=101.27 Aligned_cols=133 Identities=14% Similarity=0.200 Sum_probs=86.9
Q ss_pred eceeeEEeEEEEEeCCcEEEEeecCCCCCCcceeeEEeeCC-Ccee----------------------eecC-Cc-eE--
Q psy12724 11 QYYEAQVYDVFVIKGNAAVFKCNLPSFVSDHLDVVSWADTD-GGQY----------------------QIDN-QD-FV-- 63 (167)
Q Consensus 11 ~~~~~~~~~~~v~~G~~~~l~C~a~~~~~~~~~~i~W~k~~-~~~~----------------------~~~~-~~-~v-- 63 (167)
+.....+.++.+.+|+++.|.|.+.+.+. +.+.|+|.+ +... ..+. .. .+
T Consensus 2 ~~v~~~p~~v~v~~G~~v~L~C~~~~~~~---~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~sL~I 78 (245)
T 3nfj_J 2 QTIHQWPATLVQPVGSPLSLECTVEGTSN---PNLYWYRQAAGRGLQLLFYSVGIGQISSEVPQNLSASRPQDRQFILSS 78 (245)
T ss_dssp CEEEEECSEEEEETTCCEEEEEEEESCSS---CEEEEEEESTTSCEEEEEEESSTTCCBCSSCCSSEEEEEETTEEEEEE
T ss_pred CeeeCCCceEEecCCCCEEEEEEecCCCC---ceEEEEEECCCCCcEEEEEECCCcccCCccCCcEEEEecCCCEEEEEE
Confidence 44567788999999999999999987654 479999832 1100 0000 00 11
Q ss_pred ------EEeeeEEEecC----------------eEEE----------------------eCCcEEEEeeeCCccCCcce-
Q psy12724 64 ------VSQSYTVNIMD----------------EHVL----------------------KGNSAVLKCHIPSFVADYVA- 98 (167)
Q Consensus 64 ------~~g~y~c~~~~----------------~~v~----------------------~G~~a~l~C~~~~~~~~p~p- 98 (167)
.+|.|.|.+.+ ..|. .|+++.|.|.+.+. .|.+
T Consensus 79 ~~v~~~D~G~Y~C~~~~~~g~~~~~~~~~~~~~l~V~~~~~~~~~P~v~~~~~~~~~~~~g~~~~l~C~~~g~--~p~~~ 156 (245)
T 3nfj_J 79 KKLLLSDSGFYLCAWSVSVGAGVPTIYFGEGSWLTVVEDLNKVFPPEVAVFEPSEAEISHTQKATLVCLATGF--FPDHV 156 (245)
T ss_dssp SSCCGGGCEEEEEEEECCTTTSSCCCEECCCEEEEEESCGGGCBCCEEEEEECCHHHHHHHSEEEEEEEEEEE--BSSCE
T ss_pred CCCChhhCEEEEEEEeeccCCCceeEEECCCeEEEEEcccCCCCCCceEeecCCcccccCCCceEEEEEEccC--cCCCE
Confidence 27999999865 0111 18999999999763 2433
Q ss_pred eEEEEeCCCeeeEEeee----------ecCCceEEEccCCeEEEeecCcCC-CCcceEEEeeecC
Q psy12724 99 VESWISDQGEELFVDMT----------ESTDGKYLVLPSGELHIRDVGPED-GYKSYQCRTKHRL 152 (167)
Q Consensus 99 ~i~W~k~~~~~l~~~~~----------~~~~~r~~~~~~g~L~I~~v~~~D-~~G~Y~C~a~n~~ 152 (167)
.++|+||+ ..+..... ++.++.|.+. ..|.|.....+| . |.|+|.|.|..
T Consensus 157 ~v~W~k~g-~~l~~~~~~~~~~~~~~~~~~~~~~~~~--s~L~i~~~~~~d~g-~~YtC~v~~~~ 217 (245)
T 3nfj_J 157 ELSWWVNG-KEVHSGVCTDPQPLKEQPALNDSRYALS--SRLRVSATFWQNPR-NHFRCQVQFYG 217 (245)
T ss_dssp EEEEEETT-EEECTTEEECSSCEESSSSSTTCCEEEE--EEEEEEHHHHTCTT-CEEEEEEEECC
T ss_pred EEEEEECC-EECCCCcccccccccccccCCCCCEEEE--EEEEECHHHhccCC-CeEEEEEEECC
Confidence 68999997 55532100 0023344332 368999999998 5 69999999975
No 209
>4fqp_A Poliovirus receptor; immunoglobulin-like domain, IG domain, viral entry receptor, adhesion; HET: NAG BMA FUC MAN; 3.60A {Homo sapiens} PDB: 1nn8_R 1dgi_R
Probab=99.47 E-value=8.9e-14 Score=110.07 Aligned_cols=133 Identities=16% Similarity=0.210 Sum_probs=86.4
Q ss_pred eeEEeEEEEEeCCcEEEEeecCCCCCCc--ceeeEEeeCCCcee---e--------ecCCc---------------eE--
Q psy12724 14 EAQVYDVFVIKGNAAVFKCNLPSFVSDH--LDVVSWADTDGGQY---Q--------IDNQD---------------FV-- 63 (167)
Q Consensus 14 ~~~~~~~~v~~G~~~~l~C~a~~~~~~~--~~~i~W~k~~~~~~---~--------~~~~~---------------~v-- 63 (167)
...|.++.+..|+++.|.|.+.+.+.+. +..|.|.|++.... . ....+ .+
T Consensus 4 v~~P~~v~~~~G~~v~L~C~v~~~~~~~~~~~~V~W~k~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~sL~I 83 (313)
T 4fqp_A 4 VQAPTQVPGFLGDSVTLPCYLQVPNMEVTHVSQLTWARHGESGSMAVFHQTQGPSYSESKRLEFVAARLGAELRNASLRM 83 (313)
T ss_dssp EECCSEECCBTTSCEEECCEEECCTTSCCCCCEEEEEETTSSSCSEEEETTTEEEESSTTTEEESSCCTTSCCCBCCEEE
T ss_pred EcCCCEEEEecCCCEEEEEEEECCCCCccceEEEEEEECCCCcceEEEecCCCceeccCcceEEEeeccCCcccceEEEE
Confidence 3467788999999999999987665431 22489999853210 0 00000 01
Q ss_pred ------EEeeeEEEecC--------------------------eEEEeCCcEEEEeeeCCccCCcceeEEEEeCCCeeeE
Q psy12724 64 ------VSQSYTVNIMD--------------------------EHVLKGNSAVLKCHIPSFVADYVAVESWISDQGEELF 111 (167)
Q Consensus 64 ------~~g~y~c~~~~--------------------------~~v~~G~~a~l~C~~~~~~~~p~p~i~W~k~~~~~l~ 111 (167)
.+|.|+|.+.+ ..+..|+.+.+.|.+.+ +.|.|.++|+|++. .+.
T Consensus 84 ~~v~~~D~G~Y~C~v~~~~~~~~~~~~~l~v~~~P~~~~~~~~~~~~~~~~~~~~C~~~~--~~P~~~i~W~~~~~-~~~ 160 (313)
T 4fqp_A 84 FGLRVEDEGNYTCLFVTFPQGSRSVDIWLRVLAKPQNTAEVQKVQLTGEPVPMARCVSTG--GRPPAQITWHSDLG-GMP 160 (313)
T ss_dssp CSCCGGGCEEEEEEEECSSSCEEEEEEEECCBBCCEEEEEECCBCCCSSCEEEEEEEEEE--EBSCCEEEEEETTC-CEE
T ss_pred CcCChhhCEEEEEEEeeccCcceeeeeeeeeccCCcceecccceEeecCceEEEEEEccC--ccCCcEEEeecCCc-ccc
Confidence 27999997621 11235778889998753 45889999999974 443
Q ss_pred Eee--eecCCceEEEccCCeEEEeecCcCCCCcceEEEeeecC
Q psy12724 112 VDM--TESTDGKYLVLPSGELHIRDVGPEDGYKSYQCRTKHRL 152 (167)
Q Consensus 112 ~~~--~~~~~~r~~~~~~g~L~I~~v~~~D~~G~Y~C~a~n~~ 152 (167)
... ....++.+.+ ...|.|.++..+|+ |.|+|.|.|..
T Consensus 161 ~~~~~~~~~~~~~~~--~s~l~i~~~~~~d~-g~Y~C~a~n~~ 200 (313)
T 4fqp_A 161 NTSQVPGFLSGTVTV--TSLWILVPSSQVDG-KNVTCKVEHES 200 (313)
T ss_dssp EEEEEECSSTTCEEE--EEEEEECCCGGGTT-CEEEEEEECTT
T ss_pred ccceeeeeccccccc--ceeeeecccccccC-eeEEEEEEccC
Confidence 211 0011222222 12599999999999 99999999965
No 210
>3m45_A Cell adhesion molecule 2; IG fold, dimer, disulfide bond, glycoprotein, immunoglobulin membrane, transmembrane; HET: NAG; 2.21A {Mus musculus}
Probab=99.47 E-value=1.8e-13 Score=92.00 Aligned_cols=79 Identities=18% Similarity=0.325 Sum_probs=58.8
Q ss_pred eEEEecCeEEEeCCcEEEEeeeCCccCCcceeEEEEeCCCeeeEEee-eecCCceEEEc----cCCeEEEeecCcCCCCc
Q psy12724 68 YTVNIMDEHVLKGNSAVLKCHIPSFVADYVAVESWISDQGEELFVDM-TESTDGKYLVL----PSGELHIRDVGPEDGYK 142 (167)
Q Consensus 68 y~c~~~~~~v~~G~~a~l~C~~~~~~~~p~p~i~W~k~~~~~l~~~~-~~~~~~r~~~~----~~g~L~I~~v~~~D~~G 142 (167)
+.-.+.+..+.+|+++.|.|.+.+ .|.|.+.|+|++...+.... ....++|+.+. .++.|.|.+++.+|+ |
T Consensus 9 ~~~~~~~~~v~~G~~v~L~C~~~~---~~~~~v~W~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~L~I~~v~~~D~-G 84 (108)
T 3m45_A 9 QFPLTQNVTVVEGGTAILTCRVDQ---NDNTSLQWSNPAQQTLYFDDKKALRDNRIELVRASWHELSISVSDVSLSDE-G 84 (108)
T ss_dssp CCEECCCEEEETTSCEEEEEEESS---CSSCCEEEECTTCCEEEETTEECSCCTTEEEEEESSSEEEEEECSCCGGGC-E
T ss_pred ccccCCeeEEEeCCcEEEEeEEcC---CCccEEEEEcCCCceEEEcCCcccccCcEEEeecCCCcEEEEECCCChhHC-e
Confidence 445567789999999999999984 47889999998742332110 00123477654 345899999999999 9
Q ss_pred ceEEEeee
Q psy12724 143 SYQCRTKH 150 (167)
Q Consensus 143 ~Y~C~a~n 150 (167)
.|+|.|.|
T Consensus 85 ~Y~C~~~n 92 (108)
T 3m45_A 85 QYTCSLFT 92 (108)
T ss_dssp EEEEEECS
T ss_pred EEEEEEEc
Confidence 99999999
No 211
>2cr3_A Basic fibroblast growth factor receptor 1; IG fold, FGFR1, BFGF-R, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.47 E-value=8.9e-14 Score=93.35 Aligned_cols=68 Identities=22% Similarity=0.404 Sum_probs=55.1
Q ss_pred ecCeEEEeCCcEEEEeeeCCccCCcceeEEEEeCCCeeeEEeeeecCCceEEEccCCeEEEeecCcCCCCcceEEEeeec
Q psy12724 72 IMDEHVLKGNSAVLKCHIPSFVADYVAVESWISDQGEELFVDMTESTDGKYLVLPSGELHIRDVGPEDGYKSYQCRTKHR 151 (167)
Q Consensus 72 ~~~~~v~~G~~a~l~C~~~~~~~~p~p~i~W~k~~~~~l~~~~~~~~~~r~~~~~~g~L~I~~v~~~D~~G~Y~C~a~n~ 151 (167)
+.+..+.+|+++.|.|.+.+ .| |.++|+|++ ..+. ...++.+. ++.|.|.+++.+|+ |.|+|.|.|.
T Consensus 10 p~~~~v~~G~~v~L~C~~~g---~p-p~i~W~k~g-~~~~------~~~~~~~~-~~~L~i~~v~~~D~-G~Y~C~a~n~ 76 (99)
T 2cr3_A 10 VESFLVHPGDLLQLRCRLRD---DV-QSINWLRDG-VQLA------ESNRTRIT-GEEVEVQDSVPADS-GLYACVTSSP 76 (99)
T ss_dssp EEECCBCTTSCEEEECCCCS---SC-CEEEEEESS-SBCC------CCSSEEEC-SSEEEETTCCTTTC-EEEEEEEEET
T ss_pred CcCeEEeCCCcEEEEEEecC---CC-CeEEEEECC-EECC------CCCcEEEE-CCEEEEccCCHHHC-EEEEEEEEeC
Confidence 34456789999999999984 46 789999997 4553 24466655 68999999999999 9999999998
Q ss_pred C
Q psy12724 152 L 152 (167)
Q Consensus 152 ~ 152 (167)
.
T Consensus 77 ~ 77 (99)
T 2cr3_A 77 S 77 (99)
T ss_dssp T
T ss_pred C
Confidence 6
No 212
>2edf_A Obscurin; beta-sandwich, IG-fold, structural genomics, NPPSFA national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.47 E-value=7.6e-14 Score=93.91 Aligned_cols=79 Identities=23% Similarity=0.427 Sum_probs=62.0
Q ss_pred EEecCeEEEeCCcEEEEeeeCCccCCcceeEEEEeCCCeeeEEeeeecCCceEEEccCC---eEEEeecCcCCCCcceEE
Q psy12724 70 VNIMDEHVLKGNSAVLKCHIPSFVADYVAVESWISDQGEELFVDMTESTDGKYLVLPSG---ELHIRDVGPEDGYKSYQC 146 (167)
Q Consensus 70 c~~~~~~v~~G~~a~l~C~~~~~~~~p~p~i~W~k~~~~~l~~~~~~~~~~r~~~~~~g---~L~I~~v~~~D~~G~Y~C 146 (167)
-.+.+..+.+|+++.|.|.+.+ |.|.++|+|++ ..+. ...++.+..+| .|.|.+++.+|+ |.|+|
T Consensus 13 ~~~~~~~v~~G~~v~l~C~~~~----~~~~v~W~k~g-~~~~------~~~~~~~~~~~~~~~L~I~~v~~~D~-G~Y~C 80 (103)
T 2edf_A 13 KPLEDQWVAPGEDVELRCELSR----AGTPVHWLKDR-KAIR------KSQKYDVVCEGTMAMLVIRGASLKDA-GEYTC 80 (103)
T ss_dssp ECCCCEEECTTSCEEECCEESS----SSCCCCEEESS-CBCC------CSSSEEEEEETTEEEEEESSCCTTTC-SEEEE
T ss_pred ecCCccEEcCCCCEEEEEEEeC----CCCcEEEEECC-EEcc------CCCCEEEEECCCEEEEEECCCCcccC-EEEEE
Confidence 3345678889999999999973 67789999997 4553 34577776666 599999999999 99999
Q ss_pred EeeecCcceEEEeee
Q psy12724 147 RTKHRLTGETRLSAT 161 (167)
Q Consensus 147 ~a~n~~~~~~~l~~~ 161 (167)
.|.|. +..+.|.+.
T Consensus 81 ~a~n~-~~~~~l~V~ 94 (103)
T 2edf_A 81 EVEAS-KSTASLHVE 94 (103)
T ss_dssp ECSSC-EEEEEEEEC
T ss_pred EEccC-CcEEEEEEe
Confidence 99994 556666653
No 213
>3fku_X Neutralizing antibody F10; influenza, hemagglutinin, SCFV, F membrane, envelope protein, fusion protein, membrane, trans virion; HET: NAG BMA; 3.20A {Homo sapiens}
Probab=99.47 E-value=3.4e-13 Score=106.22 Aligned_cols=140 Identities=19% Similarity=0.272 Sum_probs=89.8
Q ss_pred EeEEEEEeCCcEEEEeecCCCCCCcceeeEEeeCC-Cce---e-eec---------------------CCc---eE----
Q psy12724 17 VYDVFVIKGNAAVFKCNLPSFVSDHLDVVSWADTD-GGQ---Y-QID---------------------NQD---FV---- 63 (167)
Q Consensus 17 ~~~~~v~~G~~~~l~C~a~~~~~~~~~~i~W~k~~-~~~---~-~~~---------------------~~~---~v---- 63 (167)
+.++.+.+|+++.|.|.+.+...+ .+.+.|+|.+ +.. + ..+ ... .+
T Consensus 7 p~~~~v~~G~~v~L~C~~~~~~~~-~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~sL~I~~ 85 (280)
T 3fku_X 7 SGAEVKKPGSSVKVSCTSSEVTFS-SFAISWVRQAPGQGLEWLGGISPMFGTPNYAQKFQGRVTITADQSTRTAYMDLRS 85 (280)
T ss_dssp CCCCEECTTCCEEEEEEECCSCCT-TSCEEECCBCSSSCCCCCEEECTTTCCEEECGGGTTTCEEEEETTTTEEEEEECS
T ss_pred CCCEEECCCCcEEEEEEeeccCCC-CeEEEEEEeCCCCCCEEEEEEeccCCccccCcccCCcEEEEEeCCCCEEEEEECC
Confidence 778899999999999999875322 2479998743 110 0 000 100 11
Q ss_pred ----EEeeeEEEecCe------------------------------------------------EEEeCCcEEEEeeeCC
Q psy12724 64 ----VSQSYTVNIMDE------------------------------------------------HVLKGNSAVLKCHIPS 91 (167)
Q Consensus 64 ----~~g~y~c~~~~~------------------------------------------------~v~~G~~a~l~C~~~~ 91 (167)
.+|.|.|.+.+. .+.+|++|.|.|.+.+
T Consensus 86 v~~~DsG~Y~C~~~~~~~~~g~~~~~~~~~~~~~L~V~~~~~~~~~~~~~~~~~~~~v~~~p~~~v~~G~~v~L~C~~~~ 165 (280)
T 3fku_X 86 LRSEDTAVYYCARSPSYICSGGTCVFDHWGQGTLVTVSSGGGGSGGGGSGGGGIQPGLTQPPSVSKGLRQTATLTCTGNS 165 (280)
T ss_dssp CCSTTCEECCEEECSSSSSSSTTCCCCEECCCCEEEECC--------------CCCSBBCCSEEEECTTCCEEEEEECCC
T ss_pred CChhhCEEEEEEEecCCccccccccccEECCCEEEEEcCCCCccCCCCCCceEeeeEEEeCCcEEEecCCCEEEEEEecC
Confidence 179999987542 3467999999999975
Q ss_pred ccCCc-ceeEEEEeCC-CeeeEEee------eecCCceEEEccCC---eEEEeecCcCCCCcceEEEeeecC------cc
Q psy12724 92 FVADY-VAVESWISDQ-GEELFVDM------TESTDGKYLVLPSG---ELHIRDVGPEDGYKSYQCRTKHRL------TG 154 (167)
Q Consensus 92 ~~~~p-~p~i~W~k~~-~~~l~~~~------~~~~~~r~~~~~~g---~L~I~~v~~~D~~G~Y~C~a~n~~------~~ 154 (167)
. .+ .+.+.|+|.. +..+.... .....+||.+..++ .|.|.+++.+|+ |.|.|.+.|.. +.
T Consensus 166 ~--~~~~~~v~W~r~~~~~~~~~l~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~Ds-G~Y~C~~~~~~~~~~~~g~ 242 (280)
T 3fku_X 166 N--NVGNQGAAWLQQHQGHPPKLLSYRNNDRPSGISERFSASRSGNTASLTITGLQPEDE-ADYYCSTWDSSLSAVVFGG 242 (280)
T ss_dssp C--CCCTTCCEEEEECSSSCCEESCCTTCCCCSSSCTTEEEEEETTEEEEEECSCCGGGC-SEEEEEEEETTTTEEEEBC
T ss_pred C--CCCCceEEEEEECCCCCCEEEEEeccccCCCCCCCEEEEccCCEEEEEECCCCHHHC-EEEEEEEecCCCCceEECC
Confidence 2 23 4788998842 11111000 00113567665433 499999999999 99999999864 34
Q ss_pred eEEEee
Q psy12724 155 ETRLSA 160 (167)
Q Consensus 155 ~~~l~~ 160 (167)
.++|++
T Consensus 243 ~t~l~V 248 (280)
T 3fku_X 243 GTKLTV 248 (280)
T ss_dssp CCEEEE
T ss_pred CEEEEE
Confidence 455655
No 214
>2eny_A Obscurin; beta-sandwich, IG-fold, structural genomics, NPPSFA national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.47 E-value=3.6e-14 Score=96.62 Aligned_cols=78 Identities=15% Similarity=0.321 Sum_probs=59.9
Q ss_pred EecCeEEEeCCcEEEEeeeCCccCCcc-eeEEEEeCCCeeeEEeeeecCCceEEEccCC---eEEEeecCcCCCCcceEE
Q psy12724 71 NIMDEHVLKGNSAVLKCHIPSFVADYV-AVESWISDQGEELFVDMTESTDGKYLVLPSG---ELHIRDVGPEDGYKSYQC 146 (167)
Q Consensus 71 ~~~~~~v~~G~~a~l~C~~~~~~~~p~-p~i~W~k~~~~~l~~~~~~~~~~r~~~~~~g---~L~I~~v~~~D~~G~Y~C 146 (167)
.+.+..+.+|++|.|.|.+.+ .|. +.++|+||+ ..+. .++|+.+..+| .|.|++++.+|+ |.|+|
T Consensus 14 ~~~~~~v~~G~~v~l~C~v~~---~~~~~~v~W~k~g-~~i~------~~~r~~~~~~~~~~~L~I~~v~~~D~-G~Y~C 82 (104)
T 2eny_A 14 RLKTMEVLEGESCSFECVLSH---ESASDPAMWTVGG-KTVG------SSSRFQATRQGRKYILVVREAAPSDA-GEVVF 82 (104)
T ss_dssp CCCCEEEESSCCEEEEEECSS---CCCSSCBCCBSSS-SBCS------BCSSCEEEEETTEEEEEECSCCTTTC-SCEEE
T ss_pred cCCCcEEcCCCcEEEEEEEcC---CCCCceeEEEECC-EECC------CCCCEEEEEcCCEEEEEECCCCHHHC-EEEEE
Confidence 346788999999999999974 353 478999998 4553 24567666555 699999999999 99999
Q ss_pred EeeecCcceEEEee
Q psy12724 147 RTKHRLTGETRLSA 160 (167)
Q Consensus 147 ~a~n~~~~~~~l~~ 160 (167)
.|.|.. ..+.|.+
T Consensus 83 ~a~~~~-~~a~L~V 95 (104)
T 2eny_A 83 SVRGLT-SKASLIV 95 (104)
T ss_dssp EETTEE-EEECEEE
T ss_pred EECCee-EEEEEEE
Confidence 998864 4455554
No 215
>2e7c_A Myosin-binding protein C, fast-type; IG-like domain, fast MYBP-C, C-protein, skeletal muscle fast-isoform, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.47 E-value=2.4e-13 Score=93.85 Aligned_cols=76 Identities=13% Similarity=0.100 Sum_probs=57.5
Q ss_pred cCeEEEeCCcEEEEeeeCCccCCcceeEEEEeCCCeeeEEeeeecCCceEEEc-cCC--eEEEeecCcCCCCcceEEEee
Q psy12724 73 MDEHVLKGNSAVLKCHIPSFVADYVAVESWISDQGEELFVDMTESTDGKYLVL-PSG--ELHIRDVGPEDGYKSYQCRTK 149 (167)
Q Consensus 73 ~~~~v~~G~~a~l~C~~~~~~~~p~p~i~W~k~~~~~l~~~~~~~~~~r~~~~-~~g--~L~I~~v~~~D~~G~Y~C~a~ 149 (167)
.+..+.+|+++.|.|.+. |.|.|.++|+|++ ..+. .+++.+. .++ .|.|.+++.+|+ |.|+|.|.
T Consensus 32 ~~~~v~~G~~~~l~C~~~---g~P~p~i~W~k~g-~~l~-------~~~~~~~~~~~~~~L~i~~~~~~D~-G~Y~C~a~ 99 (118)
T 2e7c_A 32 QTYIRKVGEQLNLVVPFQ---GKPRPQVVWTKGG-APLD-------TSRVHVRTSDFDTVFFVRQAARSDS-GEYELSVQ 99 (118)
T ss_dssp SCEEEESSSCEEEEEEEE---EESCCEEEEEETT-EECC-------CSSCEEEECSSEEEEEESSCCTTTC-EEEEEEEE
T ss_pred CCEEEECCCEEEEEEEEc---cCCCCEEEEEECC-EECC-------CCcEEEEECCCeEEEEECCCChhcC-EEEEEEEE
Confidence 456788999999999997 4599999999997 4542 2333332 233 499999999999 99999999
Q ss_pred ecC---cceEEEee
Q psy12724 150 HRL---TGETRLSA 160 (167)
Q Consensus 150 n~~---~~~~~l~~ 160 (167)
|.. +..+.|.+
T Consensus 100 N~~G~~~~~~~l~V 113 (118)
T 2e7c_A 100 IENMKDTATIRIRV 113 (118)
T ss_dssp CSSCEECCEEEEEE
T ss_pred eCCCeEEEEEEEEE
Confidence 987 33444544
No 216
>2e6q_A Obscurin-like protein 1; IG-like domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.46 E-value=2.9e-13 Score=94.16 Aligned_cols=82 Identities=18% Similarity=0.323 Sum_probs=64.0
Q ss_pred eEEEecCeEEEeCCcEEEEeeeCCccCCcceeEEEEeCCCeeeEEeeeecCCc----------eEEEccCC---eEEEee
Q psy12724 68 YTVNIMDEHVLKGNSAVLKCHIPSFVADYVAVESWISDQGEELFVDMTESTDG----------KYLVLPSG---ELHIRD 134 (167)
Q Consensus 68 y~c~~~~~~v~~G~~a~l~C~~~~~~~~p~p~i~W~k~~~~~l~~~~~~~~~~----------r~~~~~~g---~L~I~~ 134 (167)
+.-..+|..+.+|++|.|.|.+.+ .|.++|+||+ ..|.+ +. ||.+..+| .|.|++
T Consensus 11 ~~~~l~d~~v~eG~~a~f~C~vs~-----~p~v~W~knG-~~l~~------~~~~~~~~~~~~r~~i~~~g~~~~L~I~~ 78 (112)
T 2e6q_A 11 LVAGLEDVQVYDGEDAVFSLDLST-----IIQGTWFLNG-EELKS------NEPEGQVEPGALRYRIEQKGLQHRLILHA 78 (112)
T ss_dssp EEECCCCEEEETTCEEEEEEEESS-----CCCCEEEESS-CBCCS------SCCCTTSCTTSCEEEECCBTTEEEEEEES
T ss_pred EecCCCCeEEcCCCcEEEEEEECC-----CCeEEEEECC-EECcc------CcccccccccccEEEEEeCCcEEEEEECC
Confidence 344457889999999999999972 5678999998 56642 33 88888777 799999
Q ss_pred cCcCCCCcceEEEeeecCcceEEEeeeC
Q psy12724 135 VGPEDGYKSYQCRTKHRLTGETRLSATK 162 (167)
Q Consensus 135 v~~~D~~G~Y~C~a~n~~~~~~~l~~~~ 162 (167)
++.+|+ |.|+|...+.....+.|++..
T Consensus 79 v~~~D~-G~Y~~~~~~~~~ssA~L~V~~ 105 (112)
T 2e6q_A 79 VKHQDS-GALVGFSCPGVQDSAALTIQE 105 (112)
T ss_dssp CCSTTC-SEEEEEEETTEEEEEEEEEEC
T ss_pred CCHHHC-ccEEEEEECCeeEEEEEEEeC
Confidence 999999 999885556555667777643
No 217
>3m8o_H Immunoglobulin A1 heavy chain; immunoglobulin fold, immune system; 1.55A {Homo sapiens} PDB: 3qnx_B 3qny_B
Probab=99.46 E-value=1.1e-12 Score=99.06 Aligned_cols=139 Identities=17% Similarity=0.267 Sum_probs=90.9
Q ss_pred eEEeEEEEEeCCcEEEEeecCCCCCCcceeeEEeeCC-Ccee--e----ec------------CCc------------eE
Q psy12724 15 AQVYDVFVIKGNAAVFKCNLPSFVSDHLDVVSWADTD-GGQY--Q----ID------------NQD------------FV 63 (167)
Q Consensus 15 ~~~~~~~v~~G~~~~l~C~a~~~~~~~~~~i~W~k~~-~~~~--~----~~------------~~~------------~v 63 (167)
.++..+.|.+|+++.|.|.+.+.+.+ .+.+.|+|.+ +..+ . .+ ..| .+
T Consensus 5 ~~p~~~~v~~G~~v~L~C~~~~~~~~-~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~sL 83 (221)
T 3m8o_H 5 VESGGGLVQPGGSLKLSCAASGFTLS-GSNVHWVRQASGKGLEWVGRIKRNAESDATAYAASMRGRLTISRDDSKNTAFL 83 (221)
T ss_dssp EEESCEEECTTCCEEEEEEEESSCGG-GSEEEEEEECTTSCEEEEEEECCGGGTTCEEECGGGTTSEEEEEEGGGTEEEE
T ss_pred EccCCEEEcCCCCEEEEEEccccccc-ccEEEEEEECCCCCcEEEEEEcccccCcccccCccccccEEEEecCCCCEEEE
Confidence 45667889999999999999865422 2579998743 2111 0 00 011 01
Q ss_pred --------EEeeeEEEecCe----------------------EE--------EeCCcEEEEeeeCCccCCcc--eeEEEE
Q psy12724 64 --------VSQSYTVNIMDE----------------------HV--------LKGNSAVLKCHIPSFVADYV--AVESWI 103 (167)
Q Consensus 64 --------~~g~y~c~~~~~----------------------~v--------~~G~~a~l~C~~~~~~~~p~--p~i~W~ 103 (167)
.+|.|.|.+.+. .+ .+|+.+.|.|.+.+. .|. +.++|+
T Consensus 84 ~I~~v~~~DsG~Y~C~~~~~~~~~~~~~~~~l~V~~~~~~~p~v~~~~~~~~~~g~~v~L~C~~~~~--~P~~~~~v~W~ 161 (221)
T 3m8o_H 84 QMNSLKSDDTAMYYCVIRGDVYNRQWGQGTLVTVSSASPTSPKVFPLSLCSTQPDGNVVIACLVQGF--FPQEPLSVTWS 161 (221)
T ss_dssp EECSCCGGGCEEEEEEEESCTTCCCBBCCEEEEECSCCCBCCEEEEEECCSCCCTTEEEEEEEEEEE--BSSCSEEEEES
T ss_pred EECCCCHHHCEEEEEEEECCChhheECCCEEEEEecCCCCCCeEEEecCcccccCCCEEEEEEEEee--ECCCCEEEEEE
Confidence 179999987320 11 268899999999862 354 589999
Q ss_pred eCCCeeeEEeee---e-cCCceEEEccCCeEEEeecCcCCCCcceEEEeeecCcceEEEee
Q psy12724 104 SDQGEELFVDMT---E-STDGKYLVLPSGELHIRDVGPEDGYKSYQCRTKHRLTGETRLSA 160 (167)
Q Consensus 104 k~~~~~l~~~~~---~-~~~~r~~~~~~g~L~I~~v~~~D~~G~Y~C~a~n~~~~~~~l~~ 160 (167)
|++ ..+..... . ..+++|.+. ..|.|.++..+|+ |.|+|.|.|.......+++
T Consensus 162 ~~g-~~~~~~~~~~~~~~~~~~~~~~--s~L~i~~~~~~d~-g~ytC~v~~~~~~~~~~~v 218 (221)
T 3m8o_H 162 ESG-QGVTARNFPPSQDASGDLYTTS--SQLTLPATQCLAG-KSVTCHVKHYTNPSQDVTV 218 (221)
T ss_dssp CCS-TTCEEEECCCEECSSSSCEEEE--EEEEEEGGGSCTT-CEEEEEEEETTSCCEEEEE
T ss_pred ECC-EECceEEcCceeeCCCCcEEEE--EEEEECHHHcCCC-CeEEEEEEECCCCceeeec
Confidence 987 44422110 0 134556553 3699999999998 9999999998755444443
No 218
>2edk_A Myosin-binding protein C, fast-type; IG fold, fast MYBP-C, C-protein, skeletal muscle fast- isoform, MYBPCF, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.46 E-value=4.5e-14 Score=94.95 Aligned_cols=81 Identities=23% Similarity=0.312 Sum_probs=60.2
Q ss_pred EEEecCeEEEeCCcEEEEeeeCCccCCcceeEEEEeCCCeeeEEeeeecCCc--eEEEccCC---eEEEeecCcCCCCcc
Q psy12724 69 TVNIMDEHVLKGNSAVLKCHIPSFVADYVAVESWISDQGEELFVDMTESTDG--KYLVLPSG---ELHIRDVGPEDGYKS 143 (167)
Q Consensus 69 ~c~~~~~~v~~G~~a~l~C~~~~~~~~p~p~i~W~k~~~~~l~~~~~~~~~~--r~~~~~~g---~L~I~~v~~~D~~G~ 143 (167)
.-.+.+..+.+|+++.|.|.+.+ .| |.++|+||+ ..+... ... ||.+..+| .|.|.+++.+|+ |.
T Consensus 12 ~~~~~~~~v~~G~~v~l~C~~~~---~~-~~v~W~k~g-~~i~~~----~~~~~~~~~~~~~~~~~L~I~~~~~~D~-G~ 81 (101)
T 2edk_A 12 VTPLEDQQVFVGDRVEMAVEVSE---EG-AQVMWMKNG-VELTRE----DSFKARYRFKKDGKRHILIFSDVVQEDR-GR 81 (101)
T ss_dssp EECCCCEEEESSCCCBCCEEESC---SS-CCCEEEESS-CBCCCS----CCSSCCCEEEECSSEEEEECSSCCGGGC-SB
T ss_pred EecCCceEEcCCCCEEEEEEEeC---CC-CEEEEEECC-EECCCC----CCcceeEEEEECCCEEEEEECCCChhhC-EE
Confidence 33445678899999999999974 47 889999997 455321 111 66666555 599999999999 99
Q ss_pred eEEEeeecCcceEEEee
Q psy12724 144 YQCRTKHRLTGETRLSA 160 (167)
Q Consensus 144 Y~C~a~n~~~~~~~l~~ 160 (167)
|+|.|.|. ...+.|.+
T Consensus 82 Y~C~a~n~-~~~~~l~V 97 (101)
T 2edk_A 82 YQVITNGG-QCEAELIV 97 (101)
T ss_dssp EEEECSSC-EECCBEEE
T ss_pred EEEEEcCC-cEEEEEEE
Confidence 99999994 34445554
No 219
>1fhg_A Telokin; immunoglobulin fold, beta barrel, contractIle protein; 2.00A {Meleagris gallopavo} SCOP: b.1.1.4 PDB: 1tlk_A
Probab=99.46 E-value=3.7e-13 Score=97.31 Aligned_cols=77 Identities=22% Similarity=0.458 Sum_probs=61.3
Q ss_pred EeeeEEEecCeEEEeCCcEEEEeeeCCccCCcceeEEEEeCCCeeeEEeeeecCCceEEEc--cCC--eEEEeecCcCCC
Q psy12724 65 SQSYTVNIMDEHVLKGNSAVLKCHIPSFVADYVAVESWISDQGEELFVDMTESTDGKYLVL--PSG--ELHIRDVGPEDG 140 (167)
Q Consensus 65 ~g~y~c~~~~~~v~~G~~a~l~C~~~~~~~~p~p~i~W~k~~~~~l~~~~~~~~~~r~~~~--~~g--~L~I~~v~~~D~ 140 (167)
.+.+...+.+..+.+|+++.|.|.+.+ .|.|.++|+|++ ..+. ...++.+. .+| .|.|.+++.+|+
T Consensus 41 ~P~~~~~~~~~~v~~G~~v~L~C~~~g---~P~p~v~W~k~g-~~~~------~~~~~~~~~~~~~~~~L~I~~v~~~D~ 110 (154)
T 1fhg_A 41 KPYFTKTILDMEVVEGSAARFDCKVEG---YPDPEVMWFKDD-NPVK------ESRHFQIDYDEEGNCSLTISEVCGDDD 110 (154)
T ss_dssp EEEEEECCCCEEEETTSCEEEEEEEEE---ESCCEEEEEETT-EECC------CSSSEEEEECTTCEEEEEESSCCGGGC
T ss_pred CCeEEccCCcEEEeCCCeEEEEEEEEE---ecCCEEEEEECC-EECC------CCCcEEEEECCCCeEEEEECCCChhcC
Confidence 344555567788999999999999974 588999999997 4553 34556554 233 899999999999
Q ss_pred CcceEEEeeecC
Q psy12724 141 YKSYQCRTKHRL 152 (167)
Q Consensus 141 ~G~Y~C~a~n~~ 152 (167)
|.|+|.|.|..
T Consensus 111 -G~Y~C~a~N~~ 121 (154)
T 1fhg_A 111 -AKYTCKAVNSL 121 (154)
T ss_dssp -EEEEEEEEETT
T ss_pred -EEEEEEEEECC
Confidence 99999999987
No 220
>4dep_C Interleukin-1 receptor accessory protein; B-trefoil, immunoglobulin, immune system, extracellular; HET: NAG; 3.10A {Homo sapiens} PDB: 3o4o_B*
Probab=99.46 E-value=1.1e-13 Score=110.70 Aligned_cols=129 Identities=16% Similarity=0.126 Sum_probs=65.0
Q ss_pred EeEEEEEeCCcEEEEeecCCC--CCCcceeeEEeeCCCceeee------cCCc-eE------EEeeeEEEecCe------
Q psy12724 17 VYDVFVIKGNAAVFKCNLPSF--VSDHLDVVSWADTDGGQYQI------DNQD-FV------VSQSYTVNIMDE------ 75 (167)
Q Consensus 17 ~~~~~v~~G~~~~l~C~a~~~--~~~~~~~i~W~k~~~~~~~~------~~~~-~v------~~g~y~c~~~~~------ 75 (167)
+.+..+.+|+++.|.|.+... .+.+.+.+.|+|++. .+.. ++.. .+ ..|.|+|.+.+.
T Consensus 127 ~~~~~~~~g~~~~l~C~~~~~~~~g~p~~~v~W~k~~~-~l~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~n~~~g~~~ 205 (349)
T 4dep_C 127 PVHKLYIEYGIQRITCPNVDGYFPSSVKPTITWYMGCY-KIQNFNNVIPEGMNLSFLIALISNNGNYTCVVTYPENGRTF 205 (349)
T ss_dssp CEEEEETTCSEEEEECCSCTTSSCTTSCCEEEEEETTE-ECCSCSSEEEETTEEEEESCCGGGCEEEEEEEEEEETTEEE
T ss_pred CcceeeecCccEEEEcCCCcccccCCCCceEEEeeCCE-ECCCccceeecCCEEEEeeeeecCCcEEEEEEEEeeCCEEE
Confidence 456788999999999986322 112235899999853 3321 1111 11 269999976320
Q ss_pred -------------------------------EEEeCCcEEEEeeeCCc-cCCcceeEEEEeCCCeeeEEeeeecCCceEE
Q psy12724 76 -------------------------------HVLKGNSAVLKCHIPSF-VADYVAVESWISDQGEELFVDMTESTDGKYL 123 (167)
Q Consensus 76 -------------------------------~v~~G~~a~l~C~~~~~-~~~p~p~i~W~k~~~~~l~~~~~~~~~~r~~ 123 (167)
.+.+|+++.|.|.+.+. .++|.|.++|+|++ ..+... .+++.
T Consensus 206 ~~~~~~~l~v~~~~~~~~~p~i~~~~~~~~~~v~~G~~v~l~C~~~~~~~g~p~p~v~W~~~g-~~l~~~-----~~~~~ 279 (349)
T 4dep_C 206 HLTRTLTVKVVGSPKNAVPPVIHSPNDHVVYEKEPGEELLIPCTVYFSFLMDSRNEVWWTIDG-KKPDDI-----TIDVT 279 (349)
T ss_dssp EEEEEEEEEEECCGGGCCSCEEC----------------CCCEEEEECCCTTCCCEEEEESSC-C-------------CC
T ss_pred EEEEEEEEEEEccCCCCCCCeEecCCCceeEEEecCCcEEEEEEEEEccCCCCCCEEEEEECC-EEcccc-----CCccc
Confidence 33468899999998621 13588999999997 455320 11111
Q ss_pred E------cc------CCeEEEeecCcCCCCcceEEEeeecC
Q psy12724 124 V------LP------SGELHIRDVGPEDGYKSYQCRTKHRL 152 (167)
Q Consensus 124 ~------~~------~g~L~I~~v~~~D~~G~Y~C~a~n~~ 152 (167)
+ .. .+.|.|.+++.+|+.|.|+|.|.|..
T Consensus 280 ~~~~~~~~~~~~~~~~~~L~i~~v~~~d~~G~Y~C~a~N~~ 320 (349)
T 4dep_C 280 INESISHSRTEDETRTQILSIKKVTSEDLKRSYVCHARSAK 320 (349)
T ss_dssp CCEEEECCTTCCEEEEECC-------------CEEEEECSS
T ss_pred cccceeeecCCCcEEEEEEEEeeccHHHcCCcEEEEEEcCC
Confidence 1 11 23499999999993399999999987
No 221
>2rgs_A I, IG gamma-2B heavy chain; FC-fragment, immunoglobulin, glycosylation, immune system; HET: NAG FUC MAN GAL; 2.13A {Mus musculus}
Probab=99.46 E-value=3.7e-14 Score=107.72 Aligned_cols=121 Identities=15% Similarity=0.263 Sum_probs=78.4
Q ss_pred EEeCCcEEEEeecCCCC--CCcceeeEEeeCCCceeee--------c-CCc-----eE--------EEeeeEEEecCe--
Q psy12724 22 VIKGNAAVFKCNLPSFV--SDHLDVVSWADTDGGQYQI--------D-NQD-----FV--------VSQSYTVNIMDE-- 75 (167)
Q Consensus 22 v~~G~~~~l~C~a~~~~--~~~~~~i~W~k~~~~~~~~--------~-~~~-----~v--------~~g~y~c~~~~~-- 75 (167)
+.+|+++.|.|.+.+.+ .+ .+.|+|+|+++. +.. . +.+ .+ ..|.|+|.+.+.
T Consensus 23 v~~G~~v~L~C~~~g~~~~p~-~~~v~W~k~~~~-~~~~~~~~~~~~~~~~~~~~~~L~I~~~~~~D~g~Y~C~~~~~~~ 100 (218)
T 2rgs_A 23 LMISLTPKVTCVVVDVSEDDP-DVQISWFVNNVE-VHTAQTQTHREDYNSTIRVVSTLPIQHQDWMSGKEFKCKVNNKDL 100 (218)
T ss_dssp HCTTSCCEEEEEEEEECTTSC-CEEEEEEETTEE-ECCCEEEEEEETTTTEEEEEEEEECCHHHHHTTCCEEEEEEETTC
T ss_pred hccCCCeeEEEEEcCCccCCC-ceEEEEEECCcc-ccCcccccccccCCCeEEEEEEEEEcHHHcCCCCeEEEEEECCcC
Confidence 78999999999998763 22 257999999743 211 0 111 11 169999987320
Q ss_pred --------------------EE-------EeCCcEEEEeeeCCccCCcce-eEEEEeCCCeeeEEeeeecCCceEEEccC
Q psy12724 76 --------------------HV-------LKGNSAVLKCHIPSFVADYVA-VESWISDQGEELFVDMTESTDGKYLVLPS 127 (167)
Q Consensus 76 --------------------~v-------~~G~~a~l~C~~~~~~~~p~p-~i~W~k~~~~~l~~~~~~~~~~r~~~~~~ 127 (167)
.+ ..|+.+.|.|.+.+. .|.| .++|+||+ ..+... ...++....+
T Consensus 101 ~~~~~~~v~~~~~~~~~P~v~~~~~~~~~~~g~~~~L~C~~~g~--~P~~~~v~W~k~g-~~~~~~----~~~~~~~~~~ 173 (218)
T 2rgs_A 101 PSPIERTISKIKGLVRAPQVYILPPPAEQLSRKDVSLTCLVVGF--NPGDISVEWTSNG-HTEENY----KDTAPVLDSD 173 (218)
T ss_dssp SSCEEEEECCCCCCCBCCEEEEECCCGGGTTSSEEEEEEEEEEE--BSSCCEEEEEETT-EEECCE----EECCCEECTT
T ss_pred CCcceEEEeecCCCCCCCEEEEECCChHHhcCCceEEEEEEEee--eCCCcEEEEEECC-EeccCc----eecccEECCC
Confidence 01 138999999999863 3655 89999997 454211 0112222344
Q ss_pred Ce------EEEeecCcCCCCcceEEEeeecC
Q psy12724 128 GE------LHIRDVGPEDGYKSYQCRTKHRL 152 (167)
Q Consensus 128 g~------L~I~~v~~~D~~G~Y~C~a~n~~ 152 (167)
|. |.|.....+|. |.|+|.|.|..
T Consensus 174 gt~~~~s~l~v~~~~~~d~-g~YtC~a~n~~ 203 (218)
T 2rgs_A 174 GSYFIYSKLNMKTSKWEKT-DSFSCNVRHEG 203 (218)
T ss_dssp SCEEEEEEEEEEHHHHHHC-SCEEEEEECTT
T ss_pred CCEEEEEEEEECHHHcCCC-CeEEEEEEcCC
Confidence 53 55555556678 99999999986
No 222
>1z7z_I Intercellular adhesion molecule-1; ICAM-1,kilifi,CD54,human coxsackievirus A21, cryo-electron microscopy,virus-receptor complex, icosahedral virus; HET: NAG NDG; 8.00A {Homo sapiens} SCOP: b.1.1.3 b.1.1.3 b.1.1.4 b.1.1.4 b.1.1.4
Probab=99.45 E-value=1.2e-12 Score=108.33 Aligned_cols=126 Identities=10% Similarity=0.058 Sum_probs=87.1
Q ss_pred eeeEEeEEEEEeCCcEEEEeecCCCCCCcceeeEEeeCCCceeeecC---Cc---e--E------EEeeeEEEecC----
Q psy12724 13 YEAQVYDVFVIKGNAAVFKCNLPSFVSDHLDVVSWADTDGGQYQIDN---QD---F--V------VSQSYTVNIMD---- 74 (167)
Q Consensus 13 ~~~~~~~~~v~~G~~~~l~C~a~~~~~~~~~~i~W~k~~~~~~~~~~---~~---~--v------~~g~y~c~~~~---- 74 (167)
+...+.+..+.+|+++.|.|.+.+.+.+.-..|+|+|++. .+.... .. . + ..|.|+|.+.+
T Consensus 89 ~~~~~~~~~v~~G~~v~L~C~~~g~~~~~~~~v~W~k~g~-~l~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~n~~g~ 167 (450)
T 1z7z_I 89 VELAPLPSWQPVGKNLTLRCQVEGGAPRANLTVVLLRGEK-ELKREPAVGEPAEVTTTVLVRRDHHGANFSCRTELDLRP 167 (450)
T ss_dssp EEECCCCSEECTTSEEEEEEEEECCBCGGGEEEEEEETTE-EEEEEECCTTTEEEEEEEECCSSCSSCEEEEEEEEECGG
T ss_pred ceecCCCceEeeCCeEEEEEEecCCCCCcCcEEEEeeCCE-EeecccccccccceEEEEEeeccccCceEEEEEEcccCC
Confidence 3356667789999999999999987753111799999854 443321 11 1 1 27999998742
Q ss_pred ------------------------------eEEEeCCcEEEEeeeCCccCCc--ceeEEEEeCCCeeeEEeeeecCCceE
Q psy12724 75 ------------------------------EHVLKGNSAVLKCHIPSFVADY--VAVESWISDQGEELFVDMTESTDGKY 122 (167)
Q Consensus 75 ------------------------------~~v~~G~~a~l~C~~~~~~~~p--~p~i~W~k~~~~~l~~~~~~~~~~r~ 122 (167)
..+.+|+++.|.|.+.+. .| .+.++|+|++ ..+. .++
T Consensus 168 ~~~~~~~~~s~~~~l~v~~~~~~~p~~~~~~~v~~G~~v~l~C~~~g~--~P~~~~~~~W~~~~-~~~~--------~~~ 236 (450)
T 1z7z_I 168 QGLELFENTSAPYQLQTFVLPATPPQLVSPRVLEVDTQGTVVCSLDGL--FPVSEAQVHLALGD-QRLN--------PTV 236 (450)
T ss_dssp GTSCEEEEECCCEECEECCCCSSCCEEECCSEEETTSEEEEEEEEESC--TTGGGCEEEEEETT-EECC--------CEE
T ss_pred CCceEEeeccCccceeeeccCCCCCEecCceeEEeCCcEEEEEEeeCC--CCCCceEEEEeCCC-EeCC--------ceE
Confidence 234579999999999743 15 7899999998 4442 133
Q ss_pred EEccCCeEEEe---ecCcCCCCc--ceEEEeeecC
Q psy12724 123 LVLPSGELHIR---DVGPEDGYK--SYQCRTKHRL 152 (167)
Q Consensus 123 ~~~~~g~L~I~---~v~~~D~~G--~Y~C~a~n~~ 152 (167)
....+ .+.+. +++.+|+ | .|+|.|.|..
T Consensus 237 ~~~~~-~~~~~~~~~v~~~d~-G~~~Y~C~a~n~~ 269 (450)
T 1z7z_I 237 TYGND-SFSAKASVSVTAEDE-GTQRLTCAVILGN 269 (450)
T ss_dssp EEETT-EEEEEEEEECCGGGC-EEEEEEEEEEETT
T ss_pred EecCC-ceeEEEEEEeEhhhC-CcEEEEEEEccCC
Confidence 33333 23332 7899999 9 9999999986
No 223
>2e6p_A Obscurin-like protein 1; IG-like domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.45 E-value=9.9e-14 Score=93.50 Aligned_cols=73 Identities=16% Similarity=0.307 Sum_probs=57.2
Q ss_pred eEEEeCCcEEEEeeeCCccCCcceeEEEEeCCCeeeEEeeeecCCceEEEccCC---eEEEeecCcCCCCcceEEEeeec
Q psy12724 75 EHVLKGNSAVLKCHIPSFVADYVAVESWISDQGEELFVDMTESTDGKYLVLPSG---ELHIRDVGPEDGYKSYQCRTKHR 151 (167)
Q Consensus 75 ~~v~~G~~a~l~C~~~~~~~~p~p~i~W~k~~~~~l~~~~~~~~~~r~~~~~~g---~L~I~~v~~~D~~G~Y~C~a~n~ 151 (167)
..+.+|+++.|.|.+.+ .|.| ++|+|++ ..+. ...++.+..++ .|.|.+++.+|+ |.|+|.|.|.
T Consensus 20 ~~v~~G~~v~l~C~~~~---~p~~-v~W~k~g-~~~~------~~~~~~~~~~~~~~~L~I~~~~~~D~-G~Y~C~a~n~ 87 (104)
T 2e6p_A 20 LTFTTSERVVLTCELSR---VDFP-ATWYKDG-QKVE------ESELLVVKMDGRKHRLILPEAKVQDS-GEFECRTEGV 87 (104)
T ss_dssp EEEESSSCEECCEECSS---TTCC-CEEEETT-EECC------CBTTBEEEEETTEEEEEESSCCTTTC-EEEEEECSSC
T ss_pred EEEeCCCcEEEEEEecC---CCCc-cEEeeCC-EECC------CCCCEEEEeCCCEEEEEECCCChhhC-EEEEEEECCc
Confidence 57889999999999984 4778 8999997 5553 23455555444 699999999999 9999999997
Q ss_pred CcceEEEee
Q psy12724 152 LTGETRLSA 160 (167)
Q Consensus 152 ~~~~~~l~~ 160 (167)
. +.+.|.+
T Consensus 88 ~-~~~~l~V 95 (104)
T 2e6p_A 88 S-AFFGVTV 95 (104)
T ss_dssp C-CCEEEEE
T ss_pred e-EEEEEEE
Confidence 4 4556655
No 224
>4hwu_A Fibroblast growth factor receptor 2; FGFR2, KGFR, CD332, IG-C2 type 1 domain, IG superfamily, IMM system, structural genomics, PSI-biology; 2.90A {Mus musculus}
Probab=99.45 E-value=3.2e-13 Score=89.60 Aligned_cols=75 Identities=24% Similarity=0.336 Sum_probs=58.1
Q ss_pred ecCeEEEeCCcEEEEeeeCCccCCcceeEEEEeCCCeeeEEeeeecCCceEEEccCCeEEEeecCcCCCCcceEEEeeec
Q psy12724 72 IMDEHVLKGNSAVLKCHIPSFVADYVAVESWISDQGEELFVDMTESTDGKYLVLPSGELHIRDVGPEDGYKSYQCRTKHR 151 (167)
Q Consensus 72 ~~~~~v~~G~~a~l~C~~~~~~~~p~p~i~W~k~~~~~l~~~~~~~~~~r~~~~~~g~L~I~~v~~~D~~G~Y~C~a~n~ 151 (167)
+.+..+.+|+++.|.|.+.+ .|.++|+|++ ..+. ...++.+ .++.|.|.+++.+|+ |.|+|.|.|.
T Consensus 8 p~~~~v~~G~~~~l~C~~~~-----~p~v~W~k~g-~~~~------~~~~~~~-~~~~L~i~~~~~~D~-G~Y~C~a~n~ 73 (95)
T 4hwu_A 8 PEAYVVAPGESLELQCMLKD-----AAVISWTKDG-VHLG------PNNRTVL-IGEYLQIKGATPRDS-GLYACTAART 73 (95)
T ss_dssp CEEEEECTTSCEEEECCCCT-----TCEEEEEETT-EEEC------CCSSEEE-ETTEEEECSCCGGGC-EEEEEEEECS
T ss_pred CCcEEECCCCEEEEEEEeCC-----CCEEEEEECC-EECC------CCceEEE-eCCEEEECcCCcccC-EEEEEEEccC
Confidence 34567889999999999973 4689999997 5553 3456655 468999999999999 9999999998
Q ss_pred C---cceEEEee
Q psy12724 152 L---TGETRLSA 160 (167)
Q Consensus 152 ~---~~~~~l~~ 160 (167)
. +..+.|.+
T Consensus 74 ~g~~~~~~~l~V 85 (95)
T 4hwu_A 74 VDSETWIFMVNV 85 (95)
T ss_dssp SCEEEEEEEEEE
T ss_pred CCcEEEEEEEEE
Confidence 7 33444544
No 225
>1gl4_B Basement membrane-specific heparan sulfate proteoglycan core protein; immunoglobulin-like domain, extracellular matrix; HET: EPE; 2.0A {Mus musculus} SCOP: b.1.1.4
Probab=99.45 E-value=1.5e-13 Score=91.61 Aligned_cols=67 Identities=21% Similarity=0.354 Sum_probs=52.9
Q ss_pred CeEEEeCCcEEEEeeeCCccCCcceeEEEEeCCCeeeEEeeeecCCceEEEccCCeEEEeecCcCCCCcceEEEeeecC
Q psy12724 74 DEHVLKGNSAVLKCHIPSFVADYVAVESWISDQGEELFVDMTESTDGKYLVLPSGELHIRDVGPEDGYKSYQCRTKHRL 152 (167)
Q Consensus 74 ~~~v~~G~~a~l~C~~~~~~~~p~p~i~W~k~~~~~l~~~~~~~~~~r~~~~~~g~L~I~~v~~~D~~G~Y~C~a~n~~ 152 (167)
+..+.+|+++.|.|.+.+ +.|.|.++|+|++. ... ..+ ....++.|.|++++.+|+ |.|+|.|.|..
T Consensus 19 ~~~v~~G~~v~l~C~~~~--~~p~~~v~W~k~~~-~~~-------~~~-~~~~~~~L~i~~v~~~D~-G~Y~C~a~n~~ 85 (98)
T 1gl4_B 19 SQSVRPGADVTFICTAKS--KSPAYTLVWTRLHN-GKL-------PSR-AMDFNGILTIRNVQPSDA-GTYVCTGSNMF 85 (98)
T ss_dssp EEEECTTCCEEEEEEEEE--SSSCCEEEEEEGGG-BCC-------CTT-EEEETTEEEECSCCGGGC-EEEEEEEECSS
T ss_pred CeEEecCCCEEEEEeCCC--CCCCcEEEEEeCCC-CCC-------Cce-eecCCCEEEEeCCChhhC-EEEEEEecCCC
Confidence 457889999999999972 35889999999853 221 112 233578999999999999 99999999987
No 226
>2wqr_A IG epsilon chain C region; immune system, immunoglobulin domain, glycoprotein; HET: NAG BMA MAN PG4; 1.90A {Homo sapiens} PDB: 2y7q_B* 1o0v_A* 3h9y_A* 3h9z_A* 3ha0_A* 1fp5_A 1f6a_B 1g84_A
Probab=99.45 E-value=2.9e-14 Score=113.79 Aligned_cols=131 Identities=12% Similarity=0.257 Sum_probs=83.7
Q ss_pred eEEEEEeCCcEEEEeecCCCCCCc-ceeeEEeeCCCceeee---------cCCc----eE--------EEeeeEEEecCe
Q psy12724 18 YDVFVIKGNAAVFKCNLPSFVSDH-LDVVSWADTDGGQYQI---------DNQD----FV--------VSQSYTVNIMDE 75 (167)
Q Consensus 18 ~~~~v~~G~~~~l~C~a~~~~~~~-~~~i~W~k~~~~~~~~---------~~~~----~v--------~~g~y~c~~~~~ 75 (167)
....+.+|+++.|.|.+.+.+..+ ...|+|+|++++.+.. ++.. .+ ..|.|+|.+.+.
T Consensus 121 ~~~~v~~G~~v~L~C~~~g~~P~p~~~~i~W~k~~g~~~~~~~~~~~~~~~g~~~~~~~L~I~~~~~~D~G~Y~C~a~n~ 200 (323)
T 2wqr_A 121 SPFDLFIRKSPTITCLVVDLAPSKGTVQLTWSRASGKPVNHSTRKEEKQRNGTLTVTSTLPVGTRDWIEGETYQCRVTHP 200 (323)
T ss_dssp CHHHHHTSSCCEEEEEEEEECCCSSCCEEEEEETTCCCCCCCCCEEEECTTSCEEEEEEEECCHHHHHTTCCEEEEEECT
T ss_pred CHHHhccCCeEEEEEEEeccCCCCCceEEEEEECCCcccccccCCCccCCCCCEEEEEEEEECHHHccCCCCEEEEEECC
Confidence 333467799999999998764321 0169999987654421 1110 11 159999987431
Q ss_pred ----------------------EE-------EeCCcEEEEeeeCCccCCcce-eEEEEeCCCeeeEEe-e-----eecCC
Q psy12724 76 ----------------------HV-------LKGNSAVLKCHIPSFVADYVA-VESWISDQGEELFVD-M-----TESTD 119 (167)
Q Consensus 76 ----------------------~v-------~~G~~a~l~C~~~~~~~~p~p-~i~W~k~~~~~l~~~-~-----~~~~~ 119 (167)
.+ +.|+.+.|.|.+.+. .|.+ .++|+||+ ..+... . ....+
T Consensus 201 ~~~~~~~~~v~~~~~~~~~P~v~~~~~~~~~~~g~~~~l~C~~~g~--~p~~~~v~W~k~g-~~l~~~~~~~~~~~~~~~ 277 (323)
T 2wqr_A 201 HLPRALMRSTTKTSGPRAAPEVYAFATPEWPGSRDKRTLACLIQNF--MPEDISVQWLHNE-VQLPDARHSTTQPRKTKG 277 (323)
T ss_dssp TSSSCEEEEECCCCSCCBCCEEEEEECCCCTTCTTEEEEEEEEEEE--BSSCCEEEEEETT-EECCGGGEEECCCEECSS
T ss_pred CCCCCeeeEEEccCCCCCCCEEEEeCCChHHhcCCcEEEEEEeeee--eCCCcEEEEEECC-EECCCCceeecCcccCCC
Confidence 01 128999999999753 2433 79999997 454211 0 00012
Q ss_pred ceEEEccCCeEEEeecCcCCCCcceEEEeeecCcc
Q psy12724 120 GKYLVLPSGELHIRDVGPEDGYKSYQCRTKHRLTG 154 (167)
Q Consensus 120 ~r~~~~~~g~L~I~~v~~~D~~G~Y~C~a~n~~~~ 154 (167)
+.|.+ .+.|.|.+++.+|+ |.|+|.|.|....
T Consensus 278 g~~~~--~s~L~i~~~~~~d~-g~Y~C~a~n~~~~ 309 (323)
T 2wqr_A 278 SGFFV--FSRLEVTRAEWEQK-DEFICRAVHEAAS 309 (323)
T ss_dssp SSEEE--EEEEEEEHHHHHHC-CCEEEEEECTTST
T ss_pred CcEEE--EEEEEEChHHccCC-CEEEEEEEeCCCC
Confidence 22322 24699999999999 9999999998743
No 227
>2wqr_A IG epsilon chain C region; immune system, immunoglobulin domain, glycoprotein; HET: NAG BMA MAN PG4; 1.90A {Homo sapiens} PDB: 2y7q_B* 1o0v_A* 3h9y_A* 3h9z_A* 3ha0_A* 1fp5_A 1f6a_B 1g84_A
Probab=99.45 E-value=7.4e-14 Score=111.45 Aligned_cols=120 Identities=13% Similarity=0.330 Sum_probs=78.6
Q ss_pred CcEEEEeecCCCCCCcceeeEEeeCCCceeee---------cCCce-----E--------EEeeeEEEecCe--------
Q psy12724 26 NAAVFKCNLPSFVSDHLDVVSWADTDGGQYQI---------DNQDF-----V--------VSQSYTVNIMDE-------- 75 (167)
Q Consensus 26 ~~~~l~C~a~~~~~~~~~~i~W~k~~~~~~~~---------~~~~~-----v--------~~g~y~c~~~~~-------- 75 (167)
+++.|.|.+.+...+ .+.|+|+|++. .+.. +...+ + ..|.|+|.+.+.
T Consensus 25 ~~v~L~C~~~g~~P~-~~~v~W~k~g~-~l~~~~~~~~~~~~~g~~~~~s~l~i~~~~~~d~g~Y~C~a~n~~~~~~~~~ 102 (323)
T 2wqr_A 25 PTIQLLCLVSGYTPG-TIQITWLEDGQ-VMDVDLSTASTTQEGELASTQSELTLSQKHWLSDRTYTCQVTYQGHTFEDST 102 (323)
T ss_dssp SEEEEEEEEEEECCC-CEEEEEEETTE-ECCGGGEEEEEEEETTEEEEEEEEEEEHHHHHTTCCEEEEEEETTEEEEEEE
T ss_pred CcEEEEEEEeCeECC-CeEEEEEECCE-EcccceecCCcCccCCcEEEEEEEEEcHHHcCCCCcEEEEEEeCCCCcceee
Confidence 699999999886322 25799999853 3321 11111 1 149999987531
Q ss_pred ------------E---------EEeCCcEEEEeeeCCccCCcce---eEEEEeCCCeeeEEee--e-ecCCceEEEccCC
Q psy12724 76 ------------H---------VLKGNSAVLKCHIPSFVADYVA---VESWISDQGEELFVDM--T-ESTDGKYLVLPSG 128 (167)
Q Consensus 76 ------------~---------v~~G~~a~l~C~~~~~~~~p~p---~i~W~k~~~~~l~~~~--~-~~~~~r~~~~~~g 128 (167)
. +.+|+++.|.|.+.+. .|.| .++|+|+++..+.... . ...+++|. .++
T Consensus 103 ~~~~~~~~~~p~v~~~~p~~~~v~~G~~v~L~C~~~g~--~P~p~~~~i~W~k~~g~~~~~~~~~~~~~~~g~~~--~~~ 178 (323)
T 2wqr_A 103 KKCADSNPRGVSAYLSRPSPFDLFIRKSPTITCLVVDL--APSKGTVQLTWSRASGKPVNHSTRKEEKQRNGTLT--VTS 178 (323)
T ss_dssp CCCCCSSGGGCEEEECCCCHHHHHTSSCCEEEEEEEEE--CCCSSCCEEEEEETTCCCCCCCCCEEEECTTSCEE--EEE
T ss_pred ecCCCCCCCCCEEEEcCCCHHHhccCCeEEEEEEEecc--CCCCCceEEEEEECCCcccccccCCCccCCCCCEE--EEE
Confidence 0 1359999999998753 3556 8999997644432100 0 01123332 345
Q ss_pred eEEEeecCcCCCCcceEEEeeecC
Q psy12724 129 ELHIRDVGPEDGYKSYQCRTKHRL 152 (167)
Q Consensus 129 ~L~I~~v~~~D~~G~Y~C~a~n~~ 152 (167)
.|.|.+++.+|+ |.|+|.|.|..
T Consensus 179 ~L~I~~~~~~D~-G~Y~C~a~n~~ 201 (323)
T 2wqr_A 179 TLPVGTRDWIEG-ETYQCRVTHPH 201 (323)
T ss_dssp EEECCHHHHHTT-CCEEEEEECTT
T ss_pred EEEECHHHccCC-CCEEEEEECCC
Confidence 799999999999 99999999986
No 228
>4ei6_B Vbeta16 XV19 type II natural killer T cell recept variable domain, human constant...; natural killer T cell receptor, immune system; 1.60A {Mus musculus} PDB: 4ei5_D 4elk_B 4elm_F* 2esv_E 3ffc_E 3utt_E 3utp_E* 3uts_E 3qjf_B 3qjh_B 3qiw_D* 3qiu_D
Probab=99.45 E-value=8.6e-13 Score=100.90 Aligned_cols=132 Identities=15% Similarity=0.176 Sum_probs=84.9
Q ss_pred eceeeEEeEEEEEeCCcEEEEeecCCCCCCcceeeEEeeCC-------------CceeeecC---Cc-----------eE
Q psy12724 11 QYYEAQVYDVFVIKGNAAVFKCNLPSFVSDHLDVVSWADTD-------------GGQYQIDN---QD-----------FV 63 (167)
Q Consensus 11 ~~~~~~~~~~~v~~G~~~~l~C~a~~~~~~~~~~i~W~k~~-------------~~~~~~~~---~~-----------~v 63 (167)
..+...+.++.+.+|+++.|.| +.+.+. +.+.|+|.. +....... .| .+
T Consensus 3 ~~v~~~p~~v~v~~G~~v~L~C-~~~~~~---~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~sL 78 (245)
T 4ei6_B 3 PKVLQIPSHQIIDMGQMVTLNC-DPVSNH---LYFYWYKQILGQQMEFLVNFYNGKVMEKSKLFKDQFSVERPDGSYFTL 78 (245)
T ss_dssp CCCEEECSEEEEETTCCEEEEE-ECCTTC---CEEEEEEEETTTEEEEEEEEETTEEEEECTTCCTTEEEECCTTSCEEE
T ss_pred cceEeCCceEEecCCCCEEEEE-EcCCCC---CEEEEEEECCCCCcEEEEEECCCceeccCCCccCCEEEEeccCceEEE
Confidence 3466778889999999999999 555543 479999821 10010000 11 11
Q ss_pred --------EEeeeEEEecC--------------eEEE----------------------eCCcEEEEeeeCCccCCcce-
Q psy12724 64 --------VSQSYTVNIMD--------------EHVL----------------------KGNSAVLKCHIPSFVADYVA- 98 (167)
Q Consensus 64 --------~~g~y~c~~~~--------------~~v~----------------------~G~~a~l~C~~~~~~~~p~p- 98 (167)
.+|.|.|.+.+ ..|. +|+.+.|.|.+.+. .|.|
T Consensus 79 ~I~~v~~~D~G~Y~C~~~~~~~~~~~~~~~~~~l~V~~~~~~~~~p~~~~~~~~~~~~~~g~~v~l~C~~~g~--~p~~~ 156 (245)
T 4ei6_B 79 KIQPTALEDSAVYFCASSFWGAYAEQFFGPGTRLTVLEDLKNVFPPEVAVFEPSEAEISHTQKATLVCLATGF--YPDHV 156 (245)
T ss_dssp EECSCCGGGCEEEEEEEECSSTTCCCEECCCEEEEEESCGGGCBCCEEEEECCCHHHHHHHSEEEEEEEEEEE--BSSCE
T ss_pred EECCCCHhHCEEEEEEEccCCCcceEEEcCCcEEEEecccCCCCCceEEEeCCCcccccCCCceEEEEEEeeE--eCCCe
Confidence 27999999862 1111 28899999999763 2444
Q ss_pred eEEEEeCCCeeeEEeeee----------cCCceEEEccCCeEEEeecCcCC-CCcceEEEeeecC
Q psy12724 99 VESWISDQGEELFVDMTE----------STDGKYLVLPSGELHIRDVGPED-GYKSYQCRTKHRL 152 (167)
Q Consensus 99 ~i~W~k~~~~~l~~~~~~----------~~~~r~~~~~~g~L~I~~v~~~D-~~G~Y~C~a~n~~ 152 (167)
.++|+||+ ..+...... +.++.|.+. ..|.|.....+| . |.|+|.|.|..
T Consensus 157 ~v~W~~~g-~~l~~~~~~~~~~~~~~~~~~~g~~~~~--s~L~i~~~~~~d~~-g~ytC~v~~~~ 217 (245)
T 4ei6_B 157 ELSWWVNG-KEVHSGVCTDPQPLKEQPALNDSRYALS--SRLRVSATFWQNPR-NHFRCQVQFYG 217 (245)
T ss_dssp EEEEEETT-EEECTTEEECSSCEESSTTSTTCCEEEE--EEEEEEHHHHSCTT-CEEEEEEEECC
T ss_pred EEEEEECC-EECCCCcccccccccccccCCCCCEEEE--EEEEEcHHHhccCC-CeEEEEEEECC
Confidence 79999987 555311000 012333332 359999999999 8 99999999975
No 229
>1pz5_B Heavy chain of FAB (SYA/J6); antibody-antigen structure, peptide-carbohydrate mimicry, VA design, immune system; 1.80A {Mus musculus} SCOP: b.1.1.1 b.1.1.2 PDB: 1m7d_B* 1m71_B* 1m7i_B* 1r24_B 1uz6_F 1uz8_B* 1clz_H*
Probab=99.45 E-value=2.7e-13 Score=102.30 Aligned_cols=129 Identities=12% Similarity=0.170 Sum_probs=85.9
Q ss_pred eEEeEEEEEeCCcEEEEeecCCCCCCcceeeEEeeCC-Cce---eee-c--------------CCc------------eE
Q psy12724 15 AQVYDVFVIKGNAAVFKCNLPSFVSDHLDVVSWADTD-GGQ---YQI-D--------------NQD------------FV 63 (167)
Q Consensus 15 ~~~~~~~v~~G~~~~l~C~a~~~~~~~~~~i~W~k~~-~~~---~~~-~--------------~~~------------~v 63 (167)
.++....+.+|+++.|.|.+.+.+.+ .+.+.|+|++ +.. +.. . ..| .+
T Consensus 5 ~~p~~~~~~~G~~v~L~C~~~~~~~~-~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~~L 83 (220)
T 1pz5_B 5 EESGGGLVQPGGSMKLSCVASGFTFS-NYWMEWVRQSPEKGLEWVAEIRLKSNNYATHYAESVKGRFTISRDDSKSSVYL 83 (220)
T ss_dssp EEECCEEECTTCCEEEEEEEESSCGG-GSEEEEEEEETTTEEEEEEEECCGGGTTCEEECGGGTTTEEEEEEGGGTEEEE
T ss_pred eccCCEEEcCCCeEEEEEEEcCCccC-CccEEEEEeCCCCCcEEEEEEEcCCCccccccCcccCCcEEEEEeCCCCeEEE
Confidence 45778899999999999999876522 3579999864 221 100 0 011 11
Q ss_pred --------EEeeeEEEecCe--------------------------------EEEeCCcEEEEeeeCCccCCcce-eEEE
Q psy12724 64 --------VSQSYTVNIMDE--------------------------------HVLKGNSAVLKCHIPSFVADYVA-VESW 102 (167)
Q Consensus 64 --------~~g~y~c~~~~~--------------------------------~v~~G~~a~l~C~~~~~~~~p~p-~i~W 102 (167)
.+|.|.|.+.+. .+.+|+++.|.|.+.+. .|.| .++|
T Consensus 84 ~I~~v~~~D~G~Y~C~~~~~~~~~~~~~~~~~l~V~~~~~~~P~i~~~~~~~~~~~g~~v~L~C~~~g~--~P~p~~v~W 161 (220)
T 1pz5_B 84 QMNNLRAEDTGIYYCTRGGAVGAMDYWGQGTSVTVSSATTTAPSVYPLVPGCSDTSGSSVTLGCLVKGY--FPEPVTVKW 161 (220)
T ss_dssp EECSCCGGGCEEEEEEEECTTSSEEEECCCEEEEECSSCCBCCEEEEECCCSCCSCSSSEEEEEEEEEE--BSSCCEEEE
T ss_pred EEccCCHHHCEEEEEEEecCCcccceECCCEEEEEccCCCCCCeEEEcccccccCCCCcEEEEEEEEEE--eCCCeEEEE
Confidence 179999987431 01268899999999742 3778 9999
Q ss_pred EeCCCe---eeEEeeeecCCceEEEccCCeEEEeecCcCCCCcceEEEeeecC
Q psy12724 103 ISDQGE---ELFVDMTESTDGKYLVLPSGELHIRDVGPEDGYKSYQCRTKHRL 152 (167)
Q Consensus 103 ~k~~~~---~l~~~~~~~~~~r~~~~~~g~L~I~~v~~~D~~G~Y~C~a~n~~ 152 (167)
+|++.. ...+... .. ++|.+ .+.|.|.++.. |. |.|+|.|.|..
T Consensus 162 ~~~~~~~~~~~~~~~~-~~-~~~~~--~s~L~i~~~~~-~~-g~Y~C~a~n~~ 208 (220)
T 1pz5_B 162 NYGALSSGVRTVSSVL-QS-GFYSL--SSLVTVPSSTW-PS-QTVICNVAHPA 208 (220)
T ss_dssp GGGTCCTTEEECCCEE-ET-TEEEE--EEEEEECGGGT-TT-SCCEEEEEEGG
T ss_pred ecCCcccceEEcCCcc-cC-CeEEE--EEEEEEcchhc-CC-ceEEEEEEECC
Confidence 998742 1111100 11 45543 46799999987 66 99999999987
No 230
>1ccz_A Protein (CD58); LFA-3, glycoprotein; HET: NAG; 1.80A {Homo sapiens} SCOP: b.1.1.1 b.1.1.3 PDB: 1ci5_A 1qa9_B
Probab=99.45 E-value=3.2e-12 Score=94.06 Aligned_cols=114 Identities=11% Similarity=0.150 Sum_probs=76.1
Q ss_pred EeEEEEEeCCcEEEEeecCCCCCCcceeeEEeeCCCceeee---------------------cCCceE------EEeeeE
Q psy12724 17 VYDVFVIKGNAAVFKCNLPSFVSDHLDVVSWADTDGGQYQI---------------------DNQDFV------VSQSYT 69 (167)
Q Consensus 17 ~~~~~v~~G~~~~l~C~a~~~~~~~~~~i~W~k~~~~~~~~---------------------~~~~~v------~~g~y~ 69 (167)
++.+.+.+|+++.|.|.+.+ + .+.|.|.|++.. +.. ++.+.+ .+|.|+
T Consensus 2 ~~~v~~~~G~~VtL~c~~~~-~---~~~i~W~~~~~~-i~~~~~~~~~~~~~~~~R~~~~~~~~sL~I~~v~~~DsG~Y~ 76 (171)
T 1ccz_A 2 SQQIYGVVYGNVTFHVPSNV-P---LKEVLWKKQKDK-VAELENSEFRAFSSFKNRVYLDTVSGSLTIYNLTSSDEDEYE 76 (171)
T ss_dssp EEEEEEETTCCEEECCCCSS-C---CSCEEEEETTEE-EEEEETTEEEECGGGTTSEEECTTTCCEEECSCCGGGCEEEE
T ss_pred ccEEEEEcCCCEEEcCCCCC-C---cceEEEEeCCcE-EEEEcCCCcccccccCCcEEEeCCCCeEEECCCChhhCceEE
Confidence 35678999999999999843 2 467999998642 210 011111 279999
Q ss_pred EEecCe--------EE----------EeCCcEEEEeeeCCccCCcceeEEEEeCCCeeeEEeeeecCCceEEEccCCeEE
Q psy12724 70 VNIMDE--------HV----------LKGNSAVLKCHIPSFVADYVAVESWISDQGEELFVDMTESTDGKYLVLPSGELH 131 (167)
Q Consensus 70 c~~~~~--------~v----------~~G~~a~l~C~~~~~~~~p~p~i~W~k~~~~~l~~~~~~~~~~r~~~~~~g~L~ 131 (167)
|.+.+. .| ..+....|.|.+.+ .|.|.++|+|++ ..+... ....|.
T Consensus 77 C~~~n~~~~~~~~L~V~~~~~~p~i~~~~~~~~L~C~~~~---~p~p~i~W~~~~-~~l~~~------------~~~~l~ 140 (171)
T 1ccz_A 77 MESPNITDTMKFFLYVLEMVSKPMIYWECSNATLTCEVLE---GTDVELKLYQGK-EHLRSL------------RQKTMS 140 (171)
T ss_dssp EECTTCCSCEEEEEEEECCCCCCEEEEETTTTEEEEECSS---CSSCEEEEEETT-EEEEEE------------SSSEEE
T ss_pred EEEeCCCCcEEEEEEEECcCCCCEEEEecCCcEEEEEeCC---CCCcEEEEEECC-EECcCC------------cceEEE
Confidence 998531 11 22344579999984 488999999987 455321 122344
Q ss_pred EeecCcCCCCcceEEEeeecCcc
Q psy12724 132 IRDVGPEDGYKSYQCRTKHRLTG 154 (167)
Q Consensus 132 I~~v~~~D~~G~Y~C~a~n~~~~ 154 (167)
+. ...|+ |.|+|.|.|.++.
T Consensus 141 ~~--~~~~~-g~Y~C~a~N~~~~ 160 (171)
T 1ccz_A 141 YQ--WTNLR-APFKCKAVNRVSQ 160 (171)
T ss_dssp EE--CSCCS-SCEEEEEEETTEE
T ss_pred Ee--ccCCC-ceEEEEEEcccCc
Confidence 44 37888 9999999999844
No 231
>2vol_A Murine IGG FC; FC, zinc, B30.2, nucleus, pryspry, cytoplasm, mouse IGG, zinc-finger, DNA-binding, RNA-binding, tripartite motif (TRIM) protein; HET: NAG MAN GAL FUC; 1.95A {Mus musculus} PDB: 3hkf_A 1i1a_C* 1cqk_A
Probab=99.45 E-value=3e-14 Score=107.28 Aligned_cols=128 Identities=15% Similarity=0.208 Sum_probs=81.1
Q ss_pred EEeEEE-EEeCCcEEEEeecCCCC-CCcceeeEEeeCCCceeee---------cCCce-----E--------EEeeeEEE
Q psy12724 16 QVYDVF-VIKGNAAVFKCNLPSFV-SDHLDVVSWADTDGGQYQI---------DNQDF-----V--------VSQSYTVN 71 (167)
Q Consensus 16 ~~~~~~-v~~G~~~~l~C~a~~~~-~~~~~~i~W~k~~~~~~~~---------~~~~~-----v--------~~g~y~c~ 71 (167)
.|.... +.+|+++.|.|.+.+.+ .+....|.|+|+++. +.. .+.++ + ..|.|+|.
T Consensus 8 ~P~~~~~v~~G~~v~L~C~~~g~~~~p~~~~v~W~k~~~~-~~~~~~~~~~~~~~~~~~~~~~L~I~~~~~~D~G~Y~C~ 86 (207)
T 2vol_A 8 PPKPKDVLTITLTPKVTCVVVDISKDDPEVQFSWFVDDVE-VHTAQTKPREEQFNSTFRSVSELPIMHQDWLNGKEFKCR 86 (207)
T ss_dssp CCCHHHHHSTTSCCEEEEEEEEECTTCCCCEEEEEETTEE-ECCCEEECCCEETTTEEEEEEEEECCHHHHHTTCCEEEE
T ss_pred CcChhhhhccCCceEEEEEEeCcccCCCceEEEEEECCcc-ccccccCCCcCcCCCcEEEEEEEEEehhHcCCCCEEEEE
Confidence 344333 78999999999998774 111237999999743 321 11111 1 16999998
Q ss_pred ecCe--------E--------------E-------EeCCcEEEEeeeCCccCCcc-eeEEEEeCCCeeeEEeeeecCCce
Q psy12724 72 IMDE--------H--------------V-------LKGNSAVLKCHIPSFVADYV-AVESWISDQGEELFVDMTESTDGK 121 (167)
Q Consensus 72 ~~~~--------~--------------v-------~~G~~a~l~C~~~~~~~~p~-p~i~W~k~~~~~l~~~~~~~~~~r 121 (167)
+.+. . + ..|+.+.|.|.+.+. .|. +.++|+||+ ..+.... ..+
T Consensus 87 a~~~~~~~~~~~~v~~~~~~~~~P~v~~~~~~~~~~~g~~~~L~C~~~g~--~P~~~~v~W~k~g-~~l~~~~----~~~ 159 (207)
T 2vol_A 87 VNSAAFPAPIEKTISKTKGRPKAPQVYTLPPPKEQMAKDKVSLTCMITDF--FPEDITVEWESNG-QPAENYK----NTQ 159 (207)
T ss_dssp EECTTCSSCEEEEECCCCCCCBCCEEEEECCCTGGGSSSEEEEEEEEEEE--BSSCCEEEEEETT-EECSCEE----ECC
T ss_pred EEccCCCCceEEEeccCCCCCcCCeEEEeCCCHHHhcCCceEEEEEEeeE--ECCCCEEEEEECC-EeccCcc----cCC
Confidence 7430 0 1 138899999999863 244 389999997 4542110 112
Q ss_pred EEEccCC------eEEEeecCcCCCCcceEEEeeecC
Q psy12724 122 YLVLPSG------ELHIRDVGPEDGYKSYQCRTKHRL 152 (167)
Q Consensus 122 ~~~~~~g------~L~I~~v~~~D~~G~Y~C~a~n~~ 152 (167)
+....+| .|.|.....+|. |.|+|.|.|..
T Consensus 160 ~~~~~~g~~~~~s~l~i~~~~~~~~-g~ytC~a~n~~ 195 (207)
T 2vol_A 160 PIMDTDGSYFVYSKLNVQKSNWEAG-NTFTCSVLHEG 195 (207)
T ss_dssp CEECTTSCEEEEEEEEEEHHHHSSC-CEEEEEEECTT
T ss_pred ceECCCCCEEEEEEEEECHHHcCCC-CEEEEEEECCC
Confidence 2233444 366666667788 99999999986
No 232
>3q5y_A TCR N15 beta; IG, T cell receptor, antigen peptide/MHC, membrane, immune S; HET: EPE; 1.90A {Mus musculus} PDB: 1nfd_B* 3q5t_A
Probab=99.44 E-value=1.3e-12 Score=99.68 Aligned_cols=131 Identities=18% Similarity=0.209 Sum_probs=83.9
Q ss_pred ceeeEEeEEEEEeCCcEEEEeecCCCCCCcceeeEEeeCC-Cc------------e-----------eeecCC-c-eE--
Q psy12724 12 YYEAQVYDVFVIKGNAAVFKCNLPSFVSDHLDVVSWADTD-GG------------Q-----------YQIDNQ-D-FV-- 63 (167)
Q Consensus 12 ~~~~~~~~~~v~~G~~~~l~C~a~~~~~~~~~~i~W~k~~-~~------------~-----------~~~~~~-~-~v-- 63 (167)
.+...+.++.+.+|+++.|.|.+.+ +. +.+.|+|.. +. . +..+.. . .+
T Consensus 4 ~v~~~p~~v~v~~G~~v~L~C~~~~-~~---~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~sL~I 79 (240)
T 3q5y_A 4 GVVQSPRHIIKEKGGRSVLTCIPIS-GH---SNVVWYQQTLGKELKFLIQHYEKVERDKGFLPSRFSVQQFDDYHSEMNM 79 (240)
T ss_dssp CCEEECSEEEEETTCCEEEEEECCT-TC---CEEEEEEECTTSCCEEEEEEETTEEEEECSCCTTEEEEECTTSCEEEEE
T ss_pred ccccCcceeeecCCCcEEEEEEeCC-CC---ceEEEEEECCCCCCEEEEEEcCCccccCcccCCeEEEEeCCCCEEEEEE
Confidence 3556788899999999999999875 22 479999831 11 0 000010 0 11
Q ss_pred ------EEeeeEEEecC-------------eEEE----------------------eCCcEEEEeeeCCccCCcce-eEE
Q psy12724 64 ------VSQSYTVNIMD-------------EHVL----------------------KGNSAVLKCHIPSFVADYVA-VES 101 (167)
Q Consensus 64 ------~~g~y~c~~~~-------------~~v~----------------------~G~~a~l~C~~~~~~~~p~p-~i~ 101 (167)
.+|.|.|.+.+ ..|. +|+.+.|.|.+.+. .|.| .++
T Consensus 80 ~~v~~~D~G~Y~C~~~~~~~~~~~~~~~~~l~V~~~~~~~~~p~~~~~~~~~~~~~~g~~v~L~C~~~g~--~P~~~~v~ 157 (240)
T 3q5y_A 80 SALELEDSAMYFCASSLRWGDEQYFGPGTRLTVLEDLRNVTPPKVSLFEPSKAEIANKQKATLVCLARGF--FPDHVELS 157 (240)
T ss_dssp CSCCGGGCEEEEEEEESSTTBCCEECCCEEEEEESCGGGCBCCEEEEECCCHHHHHHHSEEEEEEEEEEE--BSSCEEEE
T ss_pred CcCChhHCEEEEEEEccCCCcceEEcCCEEEEEeccccCCCCCeeEEeCCchhhcccCCceEEEEEEeeE--ECCCeEEE
Confidence 27999999841 1111 27899999999763 3555 689
Q ss_pred EEeCCCeeeEEeee------ecCCceEEEccCCeEEEeecCcCC-CCcceEEEeeecC
Q psy12724 102 WISDQGEELFVDMT------ESTDGKYLVLPSGELHIRDVGPED-GYKSYQCRTKHRL 152 (167)
Q Consensus 102 W~k~~~~~l~~~~~------~~~~~r~~~~~~g~L~I~~v~~~D-~~G~Y~C~a~n~~ 152 (167)
|+||+ ..+..... ...++.|.+ ...|.|.++..+| . |.|+|.|.|..
T Consensus 158 W~~~g-~~l~~~~~~~~~~~~~~~g~~~~--~s~L~i~~~~~~d~~-g~YtC~v~~~~ 211 (240)
T 3q5y_A 158 WWVNG-KEVHSGVSTDPQAYKESNYSYSL--SSRLRVSATFWHNPR-NHFRCQVQFHG 211 (240)
T ss_dssp EEETT-EEECTTEEECSSCEEEETTEEEE--EEEEEEEHHHHSCTT-CEEEEEEEECC
T ss_pred EEECC-EECcCcEecCCceeeCCCCCEEE--EEEEEECHHHhccCC-CEEEEEEEcCC
Confidence 99997 55521100 001222322 1349999999999 5 69999999975
No 233
>1he7_A High affinity nerve growth factor receptor; transferase, TRK-receptor, strand-swapping; 2.0A {Homo sapiens} SCOP: b.1.1.4 PDB: 1wwa_X 1www_X
Probab=99.44 E-value=2.4e-13 Score=96.52 Aligned_cols=63 Identities=10% Similarity=0.097 Sum_probs=50.2
Q ss_pred eCCcEEEEeeeCCccCCcceeEEEEeCCCeeeEEeeeecCCceE--EEc--------cCCeEEEeecCcCCCCcceEEEe
Q psy12724 79 KGNSAVLKCHIPSFVADYVAVESWISDQGEELFVDMTESTDGKY--LVL--------PSGELHIRDVGPEDGYKSYQCRT 148 (167)
Q Consensus 79 ~G~~a~l~C~~~~~~~~p~p~i~W~k~~~~~l~~~~~~~~~~r~--~~~--------~~g~L~I~~v~~~D~~G~Y~C~a 148 (167)
.++.+.|+|.+. |+|.|.|+|+||| ..|.. +.++ .+. ..|.|.|.+++.+|+ |.|+|+|
T Consensus 14 ~~~~~~l~c~v~---G~P~P~I~W~knG-~~l~~------~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~D~-G~YtC~A 82 (126)
T 1he7_A 14 EMHHWCIPFSVD---GQPAPSLRWLFNG-SVLNE------TSFIFTEFLEPAANETVRHGCLRLNQPTHVNN-GNYTLLA 82 (126)
T ss_dssp CCCEEEEEEEEC---CSSCCEEEEEETT-EECCC------CSSEEEEEECCCSSCCCEEEEEEEESCCGGGC-EEEEEEE
T ss_pred cCccEEEEEEEe---eeCCCeEEEEECC-EECCC------CCceeEEEeeccccccccceEEEECcCCCCCC-EEEEEEE
Confidence 577899999998 5699999999998 56632 2332 111 136899999999999 9999999
Q ss_pred eecC
Q psy12724 149 KHRL 152 (167)
Q Consensus 149 ~n~~ 152 (167)
+|.+
T Consensus 83 ~N~~ 86 (126)
T 1he7_A 83 ANPF 86 (126)
T ss_dssp EETT
T ss_pred EECC
Confidence 9998
No 234
>3caf_A Fibroblast growth factor receptor 2; FGFR2, D2, ATP-binding, disease MU ectodermal dysplasia, glycoprotein, heparin-binding, immuno domain, kinase; 1.96A {Homo sapiens} PDB: 3cu1_A* 3euu_A 3dar_A 1wvz_A
Probab=99.44 E-value=2.4e-13 Score=90.71 Aligned_cols=70 Identities=20% Similarity=0.379 Sum_probs=53.2
Q ss_pred eEEEeCCcEEEEeeeCCccCCcceeEEEEeCCCeeeEEeeeecCCceEEE-ccCCeEEEeecCcCCCCcceEEEeeecC
Q psy12724 75 EHVLKGNSAVLKCHIPSFVADYVAVESWISDQGEELFVDMTESTDGKYLV-LPSGELHIRDVGPEDGYKSYQCRTKHRL 152 (167)
Q Consensus 75 ~~v~~G~~a~l~C~~~~~~~~p~p~i~W~k~~~~~l~~~~~~~~~~r~~~-~~~g~L~I~~v~~~D~~G~Y~C~a~n~~ 152 (167)
..+.+|+++.|.|.+. |.|.|.++|+|++ ..+... ....++.. ..++.|.|.+++.+|+ |.|+|.|.|..
T Consensus 18 ~~v~~G~~v~l~C~~~---g~p~p~v~W~~~~-~~~~~~---~~~~~~~~~~~~~~L~i~~v~~~D~-G~Y~C~a~N~~ 88 (100)
T 3caf_A 18 HAVPAANTVKFRCPAG---GNPMPTMRWLKNG-KEFKQE---HRIGGYKVRNQHWSLIMESVVPSDK-GNYTCVVENEY 88 (100)
T ss_dssp EEECTTCCEEEECCEE---EESCCEEEEEETT-EECCGG---GSTTCCEEEGGGTEEEECSCCGGGC-EEEEEEEEETT
T ss_pred EEecCCCEEEEEEEcc---ccCCCEEEEEECC-EEcccc---cccccEEEecCeEEEEEccCCcCCC-EEEEEEEEeCC
Confidence 4677899999999997 4588999999997 454321 01122233 3345899999999998 99999999987
No 235
>2k1m_A Myosin-binding protein C, cardiac-type; IG-I domain, cardiac muscle, hypertrophic cardiomyopathy, actin-binding, cell adhesion, disease mutation; NMR {Homo sapiens}
Probab=99.43 E-value=2.3e-13 Score=90.51 Aligned_cols=79 Identities=22% Similarity=0.319 Sum_probs=59.9
Q ss_pred EEEecCeEEEeCCcEEEEeeeCCccCCcceeEEEEeCCCeeeEEeeeecCCceEEEccCC---eEEEeecCcCCCCcceE
Q psy12724 69 TVNIMDEHVLKGNSAVLKCHIPSFVADYVAVESWISDQGEELFVDMTESTDGKYLVLPSG---ELHIRDVGPEDGYKSYQ 145 (167)
Q Consensus 69 ~c~~~~~~v~~G~~a~l~C~~~~~~~~p~p~i~W~k~~~~~l~~~~~~~~~~r~~~~~~g---~L~I~~v~~~D~~G~Y~ 145 (167)
...+.+..+.+|+++.|.|.+ + .|.|.++|+|++ ..+. .+.++.+..+| .|.|.+++.+|+ |.|+
T Consensus 12 ~~~~~~~~v~~G~~v~l~C~~-~---~p~~~v~W~k~~-~~l~------~~~~~~~~~~~~~~~L~I~~v~~~D~-G~Y~ 79 (95)
T 2k1m_A 12 SKKPRSVEVAAGSPAVFEAET-E---RAGVKVRWQRGG-SDIS------ASNKYGLATEGTRHTLTVREVGPADQ-GSYA 79 (95)
T ss_dssp SBCCCCEEEETTSCEEEEEEC-S---SSSCCCEEECSS-SEEC------SSTTCEEEEETTEEEEEESSCCTTCC-SEEE
T ss_pred EeCCCcEEEeCCCcEEEEEEe-C---CCCCeEEEEECC-EECC------CCCcEEEEEcCCEEEEEEcCCCcccC-EEEE
Confidence 334467789999999999999 3 478889999997 4553 34566666554 699999999999 9999
Q ss_pred EEeeecCcceEEEee
Q psy12724 146 CRTKHRLTGETRLSA 160 (167)
Q Consensus 146 C~a~n~~~~~~~l~~ 160 (167)
|.|.+. +..+.|.+
T Consensus 80 C~ag~~-~~~~~l~V 93 (95)
T 2k1m_A 80 VIAGSS-KVKFDLKV 93 (95)
T ss_dssp EEETTE-EEEEEEEE
T ss_pred EEECCc-eEEEEEEE
Confidence 999543 34455554
No 236
>3bfo_A Mucosa-associated lymphoid tissue lymphoma translocation protein 1 (isoform 2); hydrolase, immunoglobulin domain, nucleus, protease; 1.15A {Homo sapiens}
Probab=99.43 E-value=5e-13 Score=88.11 Aligned_cols=76 Identities=14% Similarity=0.278 Sum_probs=58.1
Q ss_pred EEecCeEEEeCCcEEEEeeeCCccCCcceeEEEEeCCCeeeEEeeeecCCceEEEccCCeEEEeecCcCCCCcceEEEee
Q psy12724 70 VNIMDEHVLKGNSAVLKCHIPSFVADYVAVESWISDQGEELFVDMTESTDGKYLVLPSGELHIRDVGPEDGYKSYQCRTK 149 (167)
Q Consensus 70 c~~~~~~v~~G~~a~l~C~~~~~~~~p~p~i~W~k~~~~~l~~~~~~~~~~r~~~~~~g~L~I~~v~~~D~~G~Y~C~a~ 149 (167)
..+.+..+.+|+++.|.|.+. |.|.|.++|+|++ ..+. .. .++.|.|.+++.+|+ |.|+|.|.
T Consensus 8 ~~p~~~~v~~G~~~~l~C~~~---g~p~p~i~W~~~~-~~~~------~~------~~~~L~i~~v~~~d~-G~Y~C~a~ 70 (91)
T 3bfo_A 8 VEPTSQKLMPGSTLVLQCVAV---GSPIPHYQWFKNE-LPLT------HE------TKKLYMVPYVDLEHQ-GTYWCHVY 70 (91)
T ss_dssp ECCCCEEECTTSCEEEECEEE---CSSCCEEEEEETT-EECT------TC------CSSEEEESSCCGGGC-EEEEEEEE
T ss_pred ECCCccEecCCCcEEEEEEec---cCCCCEEEEEcCC-eeCC------cC------CCCeEEECCCCHHhC-EEEEEEEE
Confidence 344567888999999999997 4588999999997 4442 11 246899999999999 99999999
Q ss_pred ecCc----ceEEEeeeC
Q psy12724 150 HRLT----GETRLSATK 162 (167)
Q Consensus 150 n~~~----~~~~l~~~~ 162 (167)
|... ..+.|.+..
T Consensus 71 n~~g~~~s~~~~l~V~~ 87 (91)
T 3bfo_A 71 NDRDSQDSKKVEIIIDE 87 (91)
T ss_dssp CSSCEEECCCEEEEEC-
T ss_pred cCCCCEEeeeEEEEEeh
Confidence 9872 334555543
No 237
>1q9r_B S25-2 FAB (IGG1K) heavy chain; antigen-binding fragment, anti-carbohydrate, anti-LPS, antibody, immunoglobulin, KDO, complex, immune system; HET: KDA KDO; 1.45A {Mus musculus} SCOP: b.1.1.1 b.1.1.2 PDB: 1q9l_B 1q9k_B* 1q9q_B* 1q9v_B* 2r1w_B* 2r1x_B* 2r1y_B* 2r2b_B* 2r2e_B* 2r2h_B* 3bpc_B* 3sy0_B* 3t4y_B* 3t65_B* 2r23_B* 1q9t_B* 3t77_B* 3okl_B* 3okk_B* 3okm_B ...
Probab=99.43 E-value=4e-13 Score=101.49 Aligned_cols=132 Identities=14% Similarity=0.207 Sum_probs=86.1
Q ss_pred eEEeEEEEEeCCcEEEEeecCCCCCCcceeeEEeeCC-Cce---ee---ec------------CCc------------eE
Q psy12724 15 AQVYDVFVIKGNAAVFKCNLPSFVSDHLDVVSWADTD-GGQ---YQ---ID------------NQD------------FV 63 (167)
Q Consensus 15 ~~~~~~~v~~G~~~~l~C~a~~~~~~~~~~i~W~k~~-~~~---~~---~~------------~~~------------~v 63 (167)
.++..+.+.+|+++.|.|.+.+.+.+ .+.+.|+|++ +.. +. .+ ..| .+
T Consensus 5 ~~p~~~~v~~G~~v~L~C~~~~~~~~-~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~~L 83 (222)
T 1q9r_B 5 VESGGGLVQSGGSLRLSCATSGFTFT-DYYMSWVRQPPGKALEWLGFIRNKANGYTTEYSPSVKGRFTISRDNSQSILYL 83 (222)
T ss_dssp EEECCCEECTTCCEEEEEEEESSCGG-GSCEEEEEECTTSCCEEEEEECCGGGTTCEEECTTTBTTEEEEEETTTTEEEE
T ss_pred ecCCceeEcCCCEEEEEEEecCccCC-CCcEEEEEECCCCCcEEEEEEccCCcccccccCcccCCceEEEEECCCCeEEE
Confidence 45677889999999999999876422 2479999853 211 10 00 011 11
Q ss_pred --------EEeeeEEEecCe---------------E-------------------EEeCCcEEEEeeeCCccCCcce-eE
Q psy12724 64 --------VSQSYTVNIMDE---------------H-------------------VLKGNSAVLKCHIPSFVADYVA-VE 100 (167)
Q Consensus 64 --------~~g~y~c~~~~~---------------~-------------------v~~G~~a~l~C~~~~~~~~p~p-~i 100 (167)
.+|.|.|.+.+. . +.+|+++.|.|.+.+. .|.| .+
T Consensus 84 ~I~~v~~~D~G~Y~C~~~~~~~~~~~~~~~~~~~l~V~~~~~~~P~i~~~~~~~~~~~g~~v~L~C~~~g~--~P~p~~v 161 (222)
T 1q9r_B 84 QMNTLRAEDSATYYCARDHDGYYERFSYWGQGTLVTVSAAKTTPPSVYPLAPGSAAQTNSMVTLGCLVKGY--FPEPVTV 161 (222)
T ss_dssp EECSCCGGGCEEEEEEECCCSSCCSCCCBCCCEEEEECSSCCBCCEEEEECCCSCCCCSSEEEEEEEEEEE--BSSCCEE
T ss_pred EECcCCcccCeEEEEEEeccCCcccceEeCCceEEEeccCCCCCCeEEEccccccccCCCcEEEEEEEccE--ECCCCEE
Confidence 169999987431 0 1258899999999752 3778 99
Q ss_pred EEEeCCCeeeEEe-e-eecCCceEEEccCCeEEEeecCcCCCCcceEEEeeecCcc
Q psy12724 101 SWISDQGEELFVD-M-TESTDGKYLVLPSGELHIRDVGPEDGYKSYQCRTKHRLTG 154 (167)
Q Consensus 101 ~W~k~~~~~l~~~-~-~~~~~~r~~~~~~g~L~I~~v~~~D~~G~Y~C~a~n~~~~ 154 (167)
+|+|++ ..+... . ....++.|.+ .+.|.|.+++.+| |.|+|.|.|....
T Consensus 162 ~W~~~g-~~~~~~~~~~~~~~~~~~~--~s~L~i~~~~~~d--g~y~C~a~n~~~~ 212 (222)
T 1q9r_B 162 TWNSGS-LSSGVHTFPAVLQSDLYTL--SSSVTVPSSTWPS--ETVTCNVAHPASS 212 (222)
T ss_dssp EEGGGT-BCTTEEEEEEEEETTEEEE--EEEEEEETTTTTT--SCCEEEEEEGGGT
T ss_pred EEecCC-eEcceEeccccccCCcEEE--EEEEEECchhcCC--CeEEEEEEccCCC
Confidence 999987 343110 0 0001223433 2479999999888 9999999998743
No 238
>2e7b_A Obscurin; IG-like domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} PDB: 2yz8_A
Probab=99.43 E-value=4e-13 Score=90.33 Aligned_cols=77 Identities=27% Similarity=0.504 Sum_probs=59.6
Q ss_pred EecCeEEEeCCcEEEEeeeCCccCCcceeEEEEeCCCeeeEEeeeecCCceEEEccCCe---EEEeecCcCCCCcceEEE
Q psy12724 71 NIMDEHVLKGNSAVLKCHIPSFVADYVAVESWISDQGEELFVDMTESTDGKYLVLPSGE---LHIRDVGPEDGYKSYQCR 147 (167)
Q Consensus 71 ~~~~~~v~~G~~a~l~C~~~~~~~~p~p~i~W~k~~~~~l~~~~~~~~~~r~~~~~~g~---L~I~~v~~~D~~G~Y~C~ 147 (167)
.+.+..+.+|+++.|.|.+.+ .|.| ++|+|++ ..+. .+.++.+..+|. |.|.+++.+|+ |.|+|.
T Consensus 14 ~~~~~~v~~G~~v~l~C~~~~---~p~~-v~W~k~~-~~l~------~~~~~~~~~~~~~~~L~I~~v~~~D~-G~Y~C~ 81 (103)
T 2e7b_A 14 ALKDLEVLEGGAATLRCVLSS---VAAP-VKWCYGN-NVLR------PGDKYSLRQEGAMLELVVRNLRPQDS-GRYSCS 81 (103)
T ss_dssp CCCCEEEESSSCEEEEEECSS---CCCS-CEEEESS-SBCC------CSSSEEEEECSSEEEEEECSCCTTTC-CCEEEE
T ss_pred cCccEEEECCCcEEEEEEEeC---CCCC-eEEEECC-EECC------CCCcEEEEEcCCEEEEEEccCCcccC-EEEEEE
Confidence 445678899999999999974 4777 9999997 4553 356788877775 99999999999 999999
Q ss_pred eeecCcceEEEee
Q psy12724 148 TKHRLTGETRLSA 160 (167)
Q Consensus 148 a~n~~~~~~~l~~ 160 (167)
+.+. +..+.|.+
T Consensus 82 ~g~~-~~~~~l~V 93 (103)
T 2e7b_A 82 FGDQ-TTSATLTV 93 (103)
T ss_dssp CSSC-BCCBCEEE
T ss_pred ECCc-EEEEEEEE
Confidence 6553 34444444
No 239
>1pd6_A Cardiac MYBP-C;, myosin-binding protein C, cardiac-type, domain C2; IG domain, structural protein; NMR {Homo sapiens} SCOP: b.1.1.4
Probab=99.43 E-value=2.8e-13 Score=92.31 Aligned_cols=81 Identities=23% Similarity=0.384 Sum_probs=61.2
Q ss_pred eEEEecC-eEEEeCCcEEEEeeeCCccCCcceeEEEEeCCCeeeEEeeeecCCceEEEccCC---eEEEeecCcCCCCcc
Q psy12724 68 YTVNIMD-EHVLKGNSAVLKCHIPSFVADYVAVESWISDQGEELFVDMTESTDGKYLVLPSG---ELHIRDVGPEDGYKS 143 (167)
Q Consensus 68 y~c~~~~-~~v~~G~~a~l~C~~~~~~~~p~p~i~W~k~~~~~l~~~~~~~~~~r~~~~~~g---~L~I~~v~~~D~~G~ 143 (167)
|.-...+ ..+.+|+++.|.|.+ + +|.|.++|+||+ ..+.. ...||.+..+| .|.|.+++.+|+ |.
T Consensus 18 f~~~~~~~~~v~~G~~v~L~C~~-~---~p~~~v~W~k~g-~~l~~-----~~~~~~~~~~~~~~~L~I~~v~~~D~-G~ 86 (104)
T 1pd6_A 18 FQKKLEPAYQVSKGHKIRLTVEL-A---DHDAEVKWLKNG-QEIQM-----SGSKYIFESIGAKRTLTISQCSLADD-AA 86 (104)
T ss_dssp CSEECCSEEEEETTSCEEEEEEC-S---SSSSCCEEEESS-SEECC-----CSSSSEEEEETTEEEEEECSCSSSSC-EE
T ss_pred EEEcCCCcEEEecCCCEEEEEEE-c---CCCCEEEEEECC-EECCC-----CCCeEEEEecCCEEEEEECCCCcccC-EE
Confidence 4445555 678899999999999 3 478889999998 45531 22577776666 899999999999 99
Q ss_pred eEEEeeecCcceEEEee
Q psy12724 144 YQCRTKHRLTGETRLSA 160 (167)
Q Consensus 144 Y~C~a~n~~~~~~~l~~ 160 (167)
|+|.|.|.. ..+.|.+
T Consensus 87 Y~C~a~~~~-~~~~l~V 102 (104)
T 1pd6_A 87 YQCVVGGEK-CSTELFV 102 (104)
T ss_dssp EEEEETTEE-ECCEEEE
T ss_pred EEEEECCCc-EEEEEEE
Confidence 999997643 4445554
No 240
>3d9a_H Heavy chain of hyhel10 antibody fragment (FAB); lysozyme, antigen, allergen, antimic bacteriolytic enzyme, glycosidase, hydrolase; 1.20A {Mus musculus} PDB: 3hfm_H 1gpo_H 3ks0_H* 1dqd_H 1ndm_B 1nak_H 1dqq_B 1dqm_H 1dqj_B 1nby_B 1nbz_B 1xgu_B 1ndg_B 1xgt_B 1xgp_B 1xgq_B 1xgr_B 1s5i_H 1f8t_H 1f90_H ...
Probab=99.42 E-value=1.3e-13 Score=103.30 Aligned_cols=132 Identities=13% Similarity=0.184 Sum_probs=85.4
Q ss_pred eEEeEEEEEeCCcEEEEeecCCCCCCcceeeEEeeCC-Cceee----e-----------cCCc------------eE---
Q psy12724 15 AQVYDVFVIKGNAAVFKCNLPSFVSDHLDVVSWADTD-GGQYQ----I-----------DNQD------------FV--- 63 (167)
Q Consensus 15 ~~~~~~~v~~G~~~~l~C~a~~~~~~~~~~i~W~k~~-~~~~~----~-----------~~~~------------~v--- 63 (167)
.+|.++.+.+|+++.|.|.+.+.+.+ .+.+.|+|++ +..+. . ...| .+
T Consensus 5 ~~p~~~~v~~G~~v~L~C~~~~~~~~-~~~v~W~r~~~g~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~I~ 83 (210)
T 3d9a_H 5 QESGPSLVKPSQTLSLTCSVTGDSIT-SDYWSWIRKFPGNRLEYMGYVSYSGSTYYNPSLKSRISITRDTSKNQYYLDLN 83 (210)
T ss_dssp EEESCSEECTTSCEEEEEEEESSCGG-GSCEEEEEEETTTEEEEEEEECTTSCEEECGGGTTTEEEEEEGGGTEEEEEEC
T ss_pred ecCCCEEecCCCcEEEEEEEecccCC-CCcEEEEEeCCCCCcEEEEEEcCCCCeEECcccCceEEEEecCCCCEEEEEEC
Confidence 35777889999999999999876531 2579999863 22110 0 0011 11
Q ss_pred -----EEeeeEEEecCe----------------------------EEEeCCcEEEEeeeCCccCCcce-eEEEEeCCCee
Q psy12724 64 -----VSQSYTVNIMDE----------------------------HVLKGNSAVLKCHIPSFVADYVA-VESWISDQGEE 109 (167)
Q Consensus 64 -----~~g~y~c~~~~~----------------------------~v~~G~~a~l~C~~~~~~~~p~p-~i~W~k~~~~~ 109 (167)
.+|.|.|.+.+. .+.+|+++.|.|.+.+. .|.| .++|+|++. .
T Consensus 84 ~v~~~D~G~Y~C~~~~~~~~~~~~~l~V~~~~~~~P~v~~~~~~~~~~~g~~v~L~C~~~g~--~P~p~~v~W~~~~~-~ 160 (210)
T 3d9a_H 84 SVTTEDTATYYCANWDGDYWGQGTLVTVSAAKTTPPSVYPLAPGSAAQTNSMVTLGCLVKGY--FPEPVTVTWNSGSL-S 160 (210)
T ss_dssp SCCGGGCEEEEEEETTSSCBCCCEEEEECCCCCBCCEEEEECCTTSCCCSSEEEEEEEEEEE--BSSCCEEEEGGGTB-C
T ss_pred CCCcccCEEEEEEEecCcccccceEEEeccCCCCCCEEEEecCCcccccCCcEEEEEEEeeE--ecCCcEEEEeeCCc-c
Confidence 179999987430 01368999999999742 3777 999999873 3
Q ss_pred eEEeee--ecCCceEEEccCCeEEEeecCcCCCCcceEEEeeecCcc
Q psy12724 110 LFVDMT--ESTDGKYLVLPSGELHIRDVGPEDGYKSYQCRTKHRLTG 154 (167)
Q Consensus 110 l~~~~~--~~~~~r~~~~~~g~L~I~~v~~~D~~G~Y~C~a~n~~~~ 154 (167)
+..... ...++.|.. .+.|.|.++.. |. |.|+|.|.|....
T Consensus 161 ~~~~~~~~~~~~~~~~~--~s~L~i~~~~~-~~-g~Y~C~a~n~~~~ 203 (210)
T 3d9a_H 161 SGVHTFPAVLQSDLYTL--SSSVTVPSSTW-PS-ETVTCNVAHPASS 203 (210)
T ss_dssp TTEEECCCEEETTEEEE--EEEEEEEGGGT-TT-SCCEEEEEEGGGT
T ss_pred cceEEcCCccCCCcEEE--EEEEEEcHHHc-CC-CcEEEEEEeCCCC
Confidence 211100 001133432 34699999988 55 9999999998743
No 241
>2cpc_A KIAA0657 protein; immunoglobulin domain, IG domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.41 E-value=7.4e-13 Score=90.31 Aligned_cols=74 Identities=22% Similarity=0.325 Sum_probs=58.2
Q ss_pred eEEEeCCcEEEEeeeCCccCCcceeEEEEeCCCeeeEEeeeecCCceEEEccCC---eEEEeecCcCCCCcceEEEeeec
Q psy12724 75 EHVLKGNSAVLKCHIPSFVADYVAVESWISDQGEELFVDMTESTDGKYLVLPSG---ELHIRDVGPEDGYKSYQCRTKHR 151 (167)
Q Consensus 75 ~~v~~G~~a~l~C~~~~~~~~p~p~i~W~k~~~~~l~~~~~~~~~~r~~~~~~g---~L~I~~v~~~D~~G~Y~C~a~n~ 151 (167)
..+.+|+++.|.|.+. +|.|.++|+|++ ..+. .+.++.+..+| .|.|.+++.+|+ |.|+|.|.|
T Consensus 23 ~~~~~G~~v~L~C~~~----~p~~~v~W~k~g-~~~~------~~~~~~~~~~~~~~~L~I~~v~~~D~-G~Y~C~a~n- 89 (113)
T 2cpc_A 23 VAAVRLERVVLTCELC----RPWAEVRWTKDG-EEVV------ESPALLLQKEDTVRRLVLPAVQLEDS-GEYLCEIDD- 89 (113)
T ss_dssp EEEETTCCEEEEEEES----CTTCCCEEEETT-EECC------CBTTBEEEECSSEEEEEESSCCTTTC-EEEEEESSS-
T ss_pred EEEEcCCeEEEEEEec----CCCCeEEEEECC-EECc------cCCCEEEEECCCEEEEEECCCCcccC-EEEEEEEec-
Confidence 4677899999999994 478889999997 5553 24566665554 799999999999 999999999
Q ss_pred CcceEEEeee
Q psy12724 152 LTGETRLSAT 161 (167)
Q Consensus 152 ~~~~~~l~~~ 161 (167)
.+..+.|.+.
T Consensus 90 ~~~~~~l~V~ 99 (113)
T 2cpc_A 90 ESASFTVTVT 99 (113)
T ss_dssp CEEEEEEEEE
T ss_pred CcEEEEEEEe
Confidence 5556666653
No 242
>3so5_A LIG-3, leucine-rich repeats and immunoglobulin-like DOMA protein 3; structural genomics, joint center for struct genomics, JCSG; HET: MLY MSE; 1.70A {Mus musculus}
Probab=99.41 E-value=3.6e-13 Score=90.52 Aligned_cols=77 Identities=18% Similarity=0.264 Sum_probs=53.7
Q ss_pred ecCeEEEeCCcEEEEeeeCCccCCcceeEEEEeCCCeeeEEeeeecCCceEEEc------cCCeEEEeecCcCCCCcceE
Q psy12724 72 IMDEHVLKGNSAVLKCHIPSFVADYVAVESWISDQGEELFVDMTESTDGKYLVL------PSGELHIRDVGPEDGYKSYQ 145 (167)
Q Consensus 72 ~~~~~v~~G~~a~l~C~~~~~~~~p~p~i~W~k~~~~~l~~~~~~~~~~r~~~~------~~g~L~I~~v~~~D~~G~Y~ 145 (167)
+.+..+.+|+++.|.|.+.+. +.|.|.++|+|++ ..+..... ....++... .++.|.|.+++.+|+ |.|+
T Consensus 17 p~~~~v~~G~~v~L~C~~~~~-~~~~~~i~W~k~~-~~~~~~~~-~~~~~~~~~~~~~~~~~~~L~I~~v~~~D~-G~Y~ 92 (112)
T 3so5_A 17 PETQSAIXGSDVSFTCSAASS-SDSPMTFAWXXDN-EALQDAEM-ENYAHLRAQGGELMEYTTILRLRNVEFTSE-GXYQ 92 (112)
T ss_dssp CCCEEECTTCCEEEEEEEEES-CCCCCEEEEEETT-EECTTCEE-EEEEETTGGGSSCEEEEEEEEECSCCGGGC-EEEE
T ss_pred CCCcEEECCCCEEEEEEEecC-CCCCEEEEEccCC-cccccccc-cceeeeeccCCCccccceEEEEeccccccC-CeEE
Confidence 445688899999999999743 3456899999997 44421100 000111111 136899999999999 9999
Q ss_pred EEeeecC
Q psy12724 146 CRTKHRL 152 (167)
Q Consensus 146 C~a~n~~ 152 (167)
|.|.|..
T Consensus 93 C~a~n~~ 99 (112)
T 3so5_A 93 CVISNHF 99 (112)
T ss_dssp EEEEETT
T ss_pred EEEEeCC
Confidence 9999986
No 243
>2edh_A Obscurin; structural genomics, NPPSFA, national project on P structural and functional analyses, riken structural genomics/proteomics initiative; NMR {Homo sapiens}
Probab=99.41 E-value=6.2e-13 Score=90.92 Aligned_cols=80 Identities=26% Similarity=0.461 Sum_probs=61.9
Q ss_pred eEEEecCeEEEeCCcEEEEeeeCCccCCcceeEEEEeCCCeeeEEeeeecCCceEEEccCC---eEEEeecCcCCCCcce
Q psy12724 68 YTVNIMDEHVLKGNSAVLKCHIPSFVADYVAVESWISDQGEELFVDMTESTDGKYLVLPSG---ELHIRDVGPEDGYKSY 144 (167)
Q Consensus 68 y~c~~~~~~v~~G~~a~l~C~~~~~~~~p~p~i~W~k~~~~~l~~~~~~~~~~r~~~~~~g---~L~I~~v~~~D~~G~Y 144 (167)
+...+.+..+.+|+++.|.|.+.+ + |.++|+|++ ..+. .+.|+.+..+| .|.|.+++.+|+ |.|
T Consensus 22 ~~~~~~~~~v~~G~~v~l~C~~~~----~-p~v~W~k~~-~~l~------~~~~~~~~~~~~~~~L~I~~v~~~D~-G~Y 88 (113)
T 2edh_A 22 FTEGLRNEEATEGATAVLRCELSK----M-APVEWWKGH-ETLR------DGDRHSLRQDGARCELQIRGLVAEDA-GEY 88 (113)
T ss_dssp EEECCCCCEECTTSCEEEEEEESS----C-CCCEEEESS-SBCC------CSSSEEEEEETTEEEEEECSCCSTTC-EEE
T ss_pred ccccCCceEEeCCCeEEEEEEECC----C-CcEEEEECC-EECC------CCCcEEEEECCCEEEEEECCCChhhC-EEE
Confidence 444556788999999999999963 2 678999997 4553 35788887777 799999999999 999
Q ss_pred EEEeeecCcceEEEeee
Q psy12724 145 QCRTKHRLTGETRLSAT 161 (167)
Q Consensus 145 ~C~a~n~~~~~~~l~~~ 161 (167)
+|.|.+ ....+.|.+.
T Consensus 89 ~C~a~~-~~~~~~l~V~ 104 (113)
T 2edh_A 89 LCMCGK-ERTSAMLTVR 104 (113)
T ss_dssp EEEETT-EEEEEEEEEC
T ss_pred EEEeCC-CCEEEEEEEe
Confidence 999943 3455566653
No 244
>3pl6_D MBP peptide / T-cell receptor beta chain chimera; TCR-MHC complex, immunoglobulin fold, immune receptor, membr immune system; HET: NAG; 2.55A {Homo sapiens}
Probab=99.40 E-value=1.5e-12 Score=101.04 Aligned_cols=132 Identities=15% Similarity=0.193 Sum_probs=85.2
Q ss_pred eceeeEEeEEEEEeCCcEEEEeecCCCCCCcceeeEEeeCC-Cce------------------------eeecC--CceE
Q psy12724 11 QYYEAQVYDVFVIKGNAAVFKCNLPSFVSDHLDVVSWADTD-GGQ------------------------YQIDN--QDFV 63 (167)
Q Consensus 11 ~~~~~~~~~~~v~~G~~~~l~C~a~~~~~~~~~~i~W~k~~-~~~------------------------~~~~~--~~~v 63 (167)
..+...+.++.+.+|+++.|.|.+.. + .+.+.|+|.+ +.. +..+. +..+
T Consensus 27 ~~v~~~p~~v~v~~G~~v~L~C~~~~-~---~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~sL 102 (268)
T 3pl6_D 27 AGVSQTPSNKVTEKGKYVELRCDPIS-G---HTALYWYRQSLGQGPEFLIYFQGTGAADDSGLPNDRFFAVRPEGSVSTL 102 (268)
T ss_dssp SSCBCCCSEEEEETTCCEEEEEBCBT-T---CCEEEEEEECTTSCCEEEEEEETTEEEECTTCCSTTEEEECTTSSSEEE
T ss_pred ceeEeCCCEEEecCCCCEEEEEEeCC-C---CceEEEEEECCCCCcEEEEEECCCCccccCCCccCcEEEEecCCCEEEE
Confidence 34566788899999999999999863 2 2479999831 111 00000 0011
Q ss_pred --------EEeeeEEEecC------------eEE-------------E---------eCCcEEEEeeeCCccCCcce-eE
Q psy12724 64 --------VSQSYTVNIMD------------EHV-------------L---------KGNSAVLKCHIPSFVADYVA-VE 100 (167)
Q Consensus 64 --------~~g~y~c~~~~------------~~v-------------~---------~G~~a~l~C~~~~~~~~p~p-~i 100 (167)
.+|.|.|.+.+ ..| . +|+++.|.|.+.+. .|.| .+
T Consensus 103 ~I~~v~~~D~G~Y~C~~~~~~~~~~~~~~~~l~V~~~~~~~~~P~v~~~~~~~~~~~~g~~v~L~C~~~g~--~p~~~~v 180 (268)
T 3pl6_D 103 KIQRTERGDSAVYLCATSALGDTQYFGPGTRLTVLEDLKNVFPPEVAVFEPSEAEISHTQKATLVCLATGF--YPDHVEL 180 (268)
T ss_dssp EECSCCGGGCEEEEEEEESSSSSCEECCCEEEEEESCGGGCBCCEEEEECCCHHHHHHHSEEEEEEEEEEE--BSSCEEE
T ss_pred EECCCCcccCEEEEEEEecCCCceeeCCcEEEEEecCcccccCCceEEeCCCcccccCCCceEEEEEECcc--cCCCeEE
Confidence 27999999863 011 1 28999999999753 2334 89
Q ss_pred EEEeCCCeeeEEeee----------ecCCceEEEccCCeEEEeecCcCC-CCcceEEEeeecC
Q psy12724 101 SWISDQGEELFVDMT----------ESTDGKYLVLPSGELHIRDVGPED-GYKSYQCRTKHRL 152 (167)
Q Consensus 101 ~W~k~~~~~l~~~~~----------~~~~~r~~~~~~g~L~I~~v~~~D-~~G~Y~C~a~n~~ 152 (167)
+|+||+ ..+..... ...++.|.+. ..|.|.+...+| + |.|+|.|.|..
T Consensus 181 ~W~~~g-~~l~~~~~~~~~~~~~~~~~~~~~~~~~--s~l~i~~~~~~d~~-g~YtC~v~~~~ 239 (268)
T 3pl6_D 181 SWWVNG-KEVHSGVCTDPQPLKEQPALNDSRYSLS--SRLRVSATFWQNPR-NHFRCQVQFYG 239 (268)
T ss_dssp EEEESS-SEECTTEEECSSCEESSTTCTTCCEEEE--EEEEEEHHHHSCTT-CEEEEEEEECC
T ss_pred EEEECC-EECCCCeEeccccccccccCCCCcEEEE--EEEEEcHHHhccCC-CEEEEEEEcCC
Confidence 999987 45521100 0023444442 358888888888 8 99999999975
No 245
>3v2a_R Vascular endothelial growth factor receptor 2; IG-homology domain, vegfr-2, growth factor receptor, VEGF LI hormone-signaling protein complex, angiogenesis; 3.20A {Homo sapiens} PDB: 3v6b_R
Probab=99.40 E-value=1.4e-13 Score=120.51 Aligned_cols=119 Identities=13% Similarity=0.126 Sum_probs=33.2
Q ss_pred EEEEeCCcEEEEeecCCCCCCcceeeEEeeCCCceee-----ec-------CCc----eE--------EEeeeEEEecC-
Q psy12724 20 VFVIKGNAAVFKCNLPSFVSDHLDVVSWADTDGGQYQ-----ID-------NQD----FV--------VSQSYTVNIMD- 74 (167)
Q Consensus 20 ~~v~~G~~~~l~C~a~~~~~~~~~~i~W~k~~~~~~~-----~~-------~~~----~v--------~~g~y~c~~~~- 74 (167)
..+.+|+++.|.|.+.+.+.+ .+.+.|.+++..... .. ... .+ ..|.|+|.+.+
T Consensus 234 ~~v~~G~~v~L~C~~~~~~~~-~~~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~~~~~ 312 (772)
T 3v2a_R 234 IELSVGEKLVLNCTARTELNV-GIDFNWEYPSSKHQHKKLVNRDLKTQSGSEMKKFLSTLTIDGVTRSDQGLYTCAASSG 312 (772)
T ss_dssp EEEETTCCEEEEEEEEECTTC-CCEEEEECC--------CEEEEC-----CCCEEEEEEEEESSCCSTTCSEEEEEEECS
T ss_pred eEEecCCcEEEEEEEecCCCC-ceeEEEecCCccCCCceeeeccccccccccceEEEEEEEECcCCcCCCeEEEEEEEcC
Confidence 689999999999999875433 247999998653211 00 000 01 26999998743
Q ss_pred ---------------------------eEEEeCCcEEEEeeeCCccCCcceeEEEEeCCCeeeEEeeeecCCceEEEccC
Q psy12724 75 ---------------------------EHVLKGNSAVLKCHIPSFVADYVAVESWISDQGEELFVDMTESTDGKYLVLPS 127 (167)
Q Consensus 75 ---------------------------~~v~~G~~a~l~C~~~~~~~~p~p~i~W~k~~~~~l~~~~~~~~~~r~~~~~~ 127 (167)
..+.+|+++.|.|.+.+ .|.|.++|+||+ ..+. .++.+..+
T Consensus 313 ~~~~~~~~~l~V~~~p~~~~~~~~~~~~~v~~G~~v~l~C~~~~---~p~~~v~W~~~g-~~l~--------~~~~~~~~ 380 (772)
T 3v2a_R 313 LMTKKNSTFVRVHEKPFVAFGSGMESLVEATVGERVRIPAKYLG---YPPPEIKWYKNG-IPLE--------SNHTIKAG 380 (772)
T ss_dssp SCEEEEEEEEEEECCCC---------------------------------------------------------------
T ss_pred CcceeEEEEEEEeCCCeeEeccCCCCcEEEcCCCcEEEEEEEee---eCCCeEEEEECC-EeCC--------CCceEccc
Confidence 22467999999999984 488999999997 4542 13333355
Q ss_pred CeEEEeecCcCCCCcceEEEeeecC
Q psy12724 128 GELHIRDVGPEDGYKSYQCRTKHRL 152 (167)
Q Consensus 128 g~L~I~~v~~~D~~G~Y~C~a~n~~ 152 (167)
+.|.|.+++.+|+ |.|+|.|.|..
T Consensus 381 ~~L~i~~v~~~d~-G~Y~C~a~n~~ 404 (772)
T 3v2a_R 381 HVLTIMEVSERDT-GNYTVILTNPI 404 (772)
T ss_dssp -------------------------
T ss_pred eeEEEecCChhcC-ceEEEEEEECC
Confidence 7899999999999 99999999976
No 246
>2dku_A KIAA1556 protein; beta-sandwich, IG-fold, obscurin, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.40 E-value=7.6e-13 Score=88.93 Aligned_cols=80 Identities=21% Similarity=0.340 Sum_probs=61.4
Q ss_pred EEecCeEEEeCCcEEEEeeeCCccCCcceeEEEEeCCCeeeEEeeeecCCceEEEccCC---eEEEeecCcCCCCcceEE
Q psy12724 70 VNIMDEHVLKGNSAVLKCHIPSFVADYVAVESWISDQGEELFVDMTESTDGKYLVLPSG---ELHIRDVGPEDGYKSYQC 146 (167)
Q Consensus 70 c~~~~~~v~~G~~a~l~C~~~~~~~~p~p~i~W~k~~~~~l~~~~~~~~~~r~~~~~~g---~L~I~~v~~~D~~G~Y~C 146 (167)
-.+.+..+.+|+++.|.|.+ +.|.|.++|+|++ ..+. .+.|+.+..++ .|.|.+++.+|+ |.|+|
T Consensus 13 ~~~~~~~v~~G~~v~l~C~~----~~p~~~v~W~k~~-~~l~------~~~~~~~~~~~~~~~L~I~~v~~~D~-G~Y~C 80 (103)
T 2dku_A 13 EELTNLQVEEKGTAVFTCKT----EHPAATVTWRKGL-LELR------ASGKHQPSQEGLTLRLTISALEKADS-DTYTC 80 (103)
T ss_dssp SCCCCEEEETTSEEEEEEEC----SSCCSCCEEEESS-CBCC------SSSSEEEEEETTEEEEEEESCCTTTC-SEEEE
T ss_pred ecCCcEEEeCCCcEEEEEEe----CCCCCeEEEEeCC-EECC------CCCeEEEEeCCCEEEEEECCCCcccC-EEEEE
Confidence 34456788999999999995 4588899999998 4553 35678777666 899999999999 99999
Q ss_pred EeeecCcceEEEeeeC
Q psy12724 147 RTKHRLTGETRLSATK 162 (167)
Q Consensus 147 ~a~n~~~~~~~l~~~~ 162 (167)
.+.+ ....+.|.+..
T Consensus 81 ~~g~-~~~~~~l~V~~ 95 (103)
T 2dku_A 81 DIGQ-AQSRAQLLVQG 95 (103)
T ss_dssp ECSS-CBCCEEEEEEC
T ss_pred EeCC-ceEEEEEEEeC
Confidence 9433 34556666643
No 247
>1wwb_X Protein (brain derived neurotrophic factor receptor TRKB); TRK receptor, receptor tyrosine kinase, 3D-domain swapping, transferase; 2.10A {Homo sapiens} SCOP: b.1.1.4 PDB: 1hcf_X
Probab=99.40 E-value=1e-12 Score=89.07 Aligned_cols=63 Identities=11% Similarity=0.120 Sum_probs=48.9
Q ss_pred eCCcEEEEeeeCCccCCcceeEEEEeCCCeeeEEeeeecCCceE----EEcc----CCeEEEeecCcCCCCcceEEEeee
Q psy12724 79 KGNSAVLKCHIPSFVADYVAVESWISDQGEELFVDMTESTDGKY----LVLP----SGELHIRDVGPEDGYKSYQCRTKH 150 (167)
Q Consensus 79 ~G~~a~l~C~~~~~~~~p~p~i~W~k~~~~~l~~~~~~~~~~r~----~~~~----~g~L~I~~v~~~D~~G~Y~C~a~n 150 (167)
.|+.+.|+|.+. |+|.|.++|+||+ ..+.. +.++ .... ++.|.|.+++.+|+ |.|+|.|+|
T Consensus 15 ~~~~~~~~c~v~---G~P~P~i~W~k~g-~~l~~------~~~~~~~~~~~~~~~~~~~L~I~~v~~~D~-G~Y~C~A~N 83 (103)
T 1wwb_X 15 SDHHWCIPFTVK---GNPKPALQWFYNG-AILNE------SKYICTKIHVTNHTEYHGCLQLDNPTHMNN-GDYTLIAKN 83 (103)
T ss_dssp CCCEEEEEEEEE---CSSCCEEEEEETT-EEECC------CSSEEEEEEEECSSEEEEEEEEESCCGGGC-EEEEEEEEC
T ss_pred ECcEEEEEEEEE---EeCCCEEEEEECC-EECCC------CCcEeEEEEecCCcEEEEEEEECCCCcccC-EEEEEEEEe
Confidence 578899999998 5599999999997 55532 2222 1112 23499999999999 999999999
Q ss_pred cC
Q psy12724 151 RL 152 (167)
Q Consensus 151 ~~ 152 (167)
..
T Consensus 84 ~~ 85 (103)
T 1wwb_X 84 EY 85 (103)
T ss_dssp SS
T ss_pred CC
Confidence 97
No 248
>2yuv_A Myosin-binding protein C, SLOW-type; SLOW-type myosin-binding protein C, immunoglobulin domain, structural genomics, NPPSFA; NMR {Homo sapiens} PDB: 2yxm_A
Probab=99.40 E-value=7.4e-13 Score=88.73 Aligned_cols=81 Identities=19% Similarity=0.228 Sum_probs=59.9
Q ss_pred eEEEecC-eEEEeCCcEEEEeeeCCccCCcceeEEEEeCCCeeeEEeeeecCCceEEEccCC---eEEEeecCcCCCCcc
Q psy12724 68 YTVNIMD-EHVLKGNSAVLKCHIPSFVADYVAVESWISDQGEELFVDMTESTDGKYLVLPSG---ELHIRDVGPEDGYKS 143 (167)
Q Consensus 68 y~c~~~~-~~v~~G~~a~l~C~~~~~~~~p~p~i~W~k~~~~~l~~~~~~~~~~r~~~~~~g---~L~I~~v~~~D~~G~ 143 (167)
|.....+ ..+.+|+++.|.|.+. +|.|.++|+||+ ..+. .+.++.+..+| .|.|.+++.+|+ |.
T Consensus 10 ~~~~~~~~~~v~~G~~v~l~C~~~----~p~~~v~W~k~g-~~i~------~~~~~~~~~~~~~~~L~I~~~~~~D~-G~ 77 (100)
T 2yuv_A 10 FAKILDPAYQVDKGGRVRFVVELA----DPKLEVKWYKNG-QEIR------PSTKYIFEHKGCQRILFINNCQMTDD-SE 77 (100)
T ss_dssp EEECCCSCEEECTTEEEEEEEEES----CTTSCEEEEESS-CBCC------CBTTEEEEEETTEEEEEEEEECTTTC-CE
T ss_pred EEecCCCccEEcCCCcEEEEEEec----CCCceEEEEECC-EECC------CCCCEEEEecCCEEEEEEcCCCcCcC-EE
Confidence 3444445 4677999999999996 388899999997 4553 24567666555 599999999999 99
Q ss_pred eEEEeeecCcceEEEeee
Q psy12724 144 YQCRTKHRLTGETRLSAT 161 (167)
Q Consensus 144 Y~C~a~n~~~~~~~l~~~ 161 (167)
|+|.|. .....+.|.+.
T Consensus 78 Y~C~ag-~~~~~~~l~V~ 94 (100)
T 2yuv_A 78 YYVTAG-DEKCSTELFVR 94 (100)
T ss_dssp EEEEET-TEEEEEEEEEC
T ss_pred EEEEEC-CceEEEEEEEe
Confidence 999993 33455566553
No 249
>2v9t_A Roundabout homolog 1; structural protein-receptor complex, developmental protein, domain, roundabout, chemotaxis, LRR domain; 1.70A {Homo sapiens}
Probab=99.39 E-value=1.6e-12 Score=89.27 Aligned_cols=80 Identities=24% Similarity=0.371 Sum_probs=58.5
Q ss_pred eeEEEecCeEEEeCCcEEEEeeeCCccCCcceeEEEEeCCCeeeEEeeeecCCceEEEccCCeEEEee-----cCcCCCC
Q psy12724 67 SYTVNIMDEHVLKGNSAVLKCHIPSFVADYVAVESWISDQGEELFVDMTESTDGKYLVLPSGELHIRD-----VGPEDGY 141 (167)
Q Consensus 67 ~y~c~~~~~~v~~G~~a~l~C~~~~~~~~p~p~i~W~k~~~~~l~~~~~~~~~~r~~~~~~g~L~I~~-----v~~~D~~ 141 (167)
.+...+.+..+.+|+++.|.|.+. |.|.|.++|+|++ ..+.... .....++....+|.|.+.. ++.+|+
T Consensus 11 ~i~~~p~~~~v~~G~~v~L~C~~~---g~P~p~v~W~k~~-~~~~~~~-~~~~~~~~~~~~~~~~~~~i~~~~v~~~D~- 84 (117)
T 2v9t_A 11 RIVEHPSDLIVSKGEPATLNCKAE---GRPTPTIEWYKGG-ERVETDK-DDPRSHRMLLPSGSLFFLRIVHGRKSRPDE- 84 (117)
T ss_dssp EEEECCCCEEECTTCCEEECCEEE---EESCCEEEEEETT-EECCCTT-TCSSCSEEECTTSCEEESSCCCBTTBCSSC-
T ss_pred eeEcCCCCEEEcCCCcEEEEEECC---ccCCCeEEEEECC-EeccccC-CCCcceeEEecCCcEEEEEEEeCCCCcCcC-
Confidence 344445677889999999999997 4599999999997 4543210 0012345566778776664 479998
Q ss_pred cceEEEeeecC
Q psy12724 142 KSYQCRTKHRL 152 (167)
Q Consensus 142 G~Y~C~a~n~~ 152 (167)
|.|+|.|.|..
T Consensus 85 G~Y~C~a~N~~ 95 (117)
T 2v9t_A 85 GVYVCVARNYL 95 (117)
T ss_dssp EEEEEEEEETT
T ss_pred EEEEEEEEeCc
Confidence 99999999988
No 250
>3qib_D 2B4 beta chain; IG domain, immune system; HET: NAG FUC BMA; 2.70A {Mus musculus}
Probab=99.39 E-value=1.6e-12 Score=101.13 Aligned_cols=131 Identities=15% Similarity=0.185 Sum_probs=85.5
Q ss_pred ceeeEEeEEEEEeCCcEEEEeecCCCCCCcceeeEEeeCC-Ccee------------------------eecC--CceE-
Q psy12724 12 YYEAQVYDVFVIKGNAAVFKCNLPSFVSDHLDVVSWADTD-GGQY------------------------QIDN--QDFV- 63 (167)
Q Consensus 12 ~~~~~~~~~~v~~G~~~~l~C~a~~~~~~~~~~i~W~k~~-~~~~------------------------~~~~--~~~v- 63 (167)
.+...+..+.+.+|+++.|.|.+.+ +. +.+.|+|.+ +... .... ...+
T Consensus 29 ~v~~~p~~v~v~~G~~v~L~C~~~~-~~---~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~sL~ 104 (270)
T 3qib_D 29 KVIQTPRYLVKGQGQKAKMRCIPEK-GH---PVVFWYQQNKNNEFKFLINFQNQEVLQQIDMTEKRFSAECPSNSPCSLE 104 (270)
T ss_dssp CCEEECSEEEEETTSCEEEEEECCT-TC---CEEEEEEECTTCCEEEEEEEETTEEEEECHHHHHHEEEECCTTSCEEEE
T ss_pred eEEeCCCeEEEcCCCCEEEEEEecC-CC---ceEEEEEECCCCCcEEEEEECCCCceecCCccCCcEEEEeCCCcEEEEE
Confidence 4566778899999999999999865 22 479999832 2110 0000 0011
Q ss_pred -------EEeeeEEEecC--------------eEE------------E----------eCCcEEEEeeeCCccCCcce-e
Q psy12724 64 -------VSQSYTVNIMD--------------EHV------------L----------KGNSAVLKCHIPSFVADYVA-V 99 (167)
Q Consensus 64 -------~~g~y~c~~~~--------------~~v------------~----------~G~~a~l~C~~~~~~~~p~p-~ 99 (167)
.+|.|.|.+.+ ..| . .|+++.|.|.+.+. .|.| .
T Consensus 105 I~~v~~~D~G~Y~C~~~~~~~~~~~~~~~~~~l~V~~~~~~~~~P~v~~~~~~~~~~~~g~~v~L~C~~~g~--~P~~~~ 182 (270)
T 3qib_D 105 IQSSEAGDSALYLCASSLNWSQDTQYFGPGTRLLVLEDLKNVFPPEVAVFEPSEAEISHTQKATLVCLATGF--YPDHVE 182 (270)
T ss_dssp ESSCCGGGCEEEEEEEESCTTCCCCEECCCEEEEEESCSTTCBCCEEEEEECCHHHHHHHSEEEEEEEEEEE--BSSCEE
T ss_pred ECCCCHhHCeEEEEEEecCCCccceEECCcEEEEEccccccccCCceEEECCCccccccCCceEEEEEecce--eCCCeE
Confidence 27999999862 011 1 28999999999753 3656 7
Q ss_pred EEEEeCCCeeeEEeee----------ecCCceEEEccCCeEEEeecCcCC-CCcceEEEeeecC
Q psy12724 100 ESWISDQGEELFVDMT----------ESTDGKYLVLPSGELHIRDVGPED-GYKSYQCRTKHRL 152 (167)
Q Consensus 100 i~W~k~~~~~l~~~~~----------~~~~~r~~~~~~g~L~I~~v~~~D-~~G~Y~C~a~n~~ 152 (167)
++|+||+ ..+..... ...++.|.+. ..|.|.+...+| . |.|+|.|.|..
T Consensus 183 v~W~k~g-~~l~~~~~~~~~~~~~~~~~~~~~~~~~--s~L~i~~~~~~d~~-g~YtC~v~~~~ 242 (270)
T 3qib_D 183 LSWWVNG-KEVHSGVCTDPQPLKEQPALNDSRYALS--SRLRVSATFWQNPR-NHFRCQVQFYG 242 (270)
T ss_dssp EEEEETT-EEECTTEEECSSCEESCTTSSSCCEEEE--EEEEEEHHHHHSTT-CEEEEEEEECC
T ss_pred EEEEECC-EECCCCcccccccccccccCCCCCEEEE--EEEEEcHHHhccCC-CeEEEEEEecC
Confidence 8999987 55531100 0023344432 358899998888 8 99999999975
No 251
>2dm7_A KIAA1556 protein; beta-sandwich, IG-fold, obscurin, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} PDB: 2edl_A 2edw_A 2gqh_A 2edt_A 2edq_A 2edr_A
Probab=99.39 E-value=2.3e-13 Score=92.23 Aligned_cols=76 Identities=25% Similarity=0.516 Sum_probs=58.6
Q ss_pred EecCeEEEeCCcEEEEeeeCCccCCcceeEEEEeCCCeeeEEeeeecCCceEEEccCCe---EEEeecCcCCCCcceEEE
Q psy12724 71 NIMDEHVLKGNSAVLKCHIPSFVADYVAVESWISDQGEELFVDMTESTDGKYLVLPSGE---LHIRDVGPEDGYKSYQCR 147 (167)
Q Consensus 71 ~~~~~~v~~G~~a~l~C~~~~~~~~p~p~i~W~k~~~~~l~~~~~~~~~~r~~~~~~g~---L~I~~v~~~D~~G~Y~C~ 147 (167)
.+.+..+.+|+++.|.|.+.+ .|.++|+|++ ..+. .+.|+.+..++. |.|.+++.+|+ |.|+|.
T Consensus 14 ~~~~~~v~~G~~v~l~C~~~~-----~p~v~W~k~~-~~~~------~~~~~~~~~~~~~~~L~I~~v~~~D~-G~Y~C~ 80 (108)
T 2dm7_A 14 DLKTKEASEGATATLQCELSK-----VAPVEWKKGP-ETLR------DGGRYSLKQDGTRCELQIHDLSVADA-GEYSCM 80 (108)
T ss_dssp CCBCCEEETTSCEEEEEEBSS-----SCCCEEESSS-SBCC------SSSSCEEEEETTEEEEEESSCCTTTC-SEEEEE
T ss_pred cCCcEEEeCCCcEEEEEEeCC-----CCeeEEEECC-EECC------CCCCEEEEecCCEEEEEECCCCcccC-EEEEEE
Confidence 345678899999999999963 2678999997 4543 356777776665 99999999999 999999
Q ss_pred eeecCcceEEEee
Q psy12724 148 TKHRLTGETRLSA 160 (167)
Q Consensus 148 a~n~~~~~~~l~~ 160 (167)
|.|. ...+.|.+
T Consensus 81 a~n~-~~~~~l~V 92 (108)
T 2dm7_A 81 CGQE-RTSATLTV 92 (108)
T ss_dssp ETTE-EEEEECEE
T ss_pred EcCC-EEEEEEEE
Confidence 9875 34444444
No 252
>3o3u_N Maltose-binding periplasmic protein, advanced Gly END product-specific receptor; RAGE, AGER, scavenger receptor; HET: MLR; 1.50A {Escherichia coli} PDB: 3s59_A 3s58_A 3cjj_A 2l7u_A* 2e5e_A
Probab=99.39 E-value=1.7e-12 Score=111.04 Aligned_cols=126 Identities=17% Similarity=0.260 Sum_probs=81.7
Q ss_pred EeEEEEEeCCcEEEEeec-CCCCCCcceeeEEeeCCCce-------------------eeecCCceE------EEeeeEE
Q psy12724 17 VYDVFVIKGNAAVFKCNL-PSFVSDHLDVVSWADTDGGQ-------------------YQIDNQDFV------VSQSYTV 70 (167)
Q Consensus 17 ~~~~~v~~G~~~~l~C~a-~~~~~~~~~~i~W~k~~~~~-------------------~~~~~~~~v------~~g~y~c 70 (167)
.++..+.+|+++.|.|.+ .+.+. +.|.|+|++... +..++.+.+ .+|.|+|
T Consensus 373 ~~~~~~~~G~~v~L~C~~~~~~~~---~~v~W~k~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~L~i~~v~~~D~G~Y~C 449 (581)
T 3o3u_N 373 AQNITARIGEPLVLKCKGAPKKPP---QRLEWKLNTGRTEAWKVLSPQGGGPWDSVARVLPNGSLFLPAVGIQDEGIFRC 449 (581)
T ss_dssp CEEEEEETTSCEEECCTTCCSSSS---CEEEEEEEETTSSSCEECCSCCSSGGGGTSEECTTSCEEESSCCGGGCEEEEE
T ss_pred hcccceecCCcEEEeeeecCCCCC---ceEEEEEcCCeeEEEEecccCCCCCcCCcEEEcCCceEEEeccccccCeEEEE
Confidence 456789999999999999 55443 479999985421 001111111 2799999
Q ss_pred EecC---------------------------eEEEeCCcE-EEEeeeCCccCCcceeEEEEeCCCeeeEEeeeecCCceE
Q psy12724 71 NIMD---------------------------EHVLKGNSA-VLKCHIPSFVADYVAVESWISDQGEELFVDMTESTDGKY 122 (167)
Q Consensus 71 ~~~~---------------------------~~v~~G~~a-~l~C~~~~~~~~p~p~i~W~k~~~~~l~~~~~~~~~~r~ 122 (167)
.+.+ ..+..|... .|.|.+.+ +.|.|.++|+||+ ..+.. .++++
T Consensus 450 ~~~n~~~~~~~~~~~l~V~~~~~~p~i~~~~~~~~~~~~~~~l~C~~~~--~~P~~~i~W~~~g-~~l~~-----~~~~~ 521 (581)
T 3o3u_N 450 QAMNRNGKETKSNYRVRVYQIPGKPEIVDSASELTAGVPNKVGTCVSEG--SYPAGTLSWHLDG-KPLVP-----NEKGV 521 (581)
T ss_dssp EEECTTSCEEEEEEEEEEEBCCCCCEEESCCSEECTTSCEEEEEEEEEE--EBSCCEEEEEETT-EECCT-----TSTTE
T ss_pred EEEcCCCceeEEEEEEEEEcCCCCCEEEcCCcccccCCceeEEEEECCC--CCCCCeEEEEECC-EECCC-----CCCeE
Confidence 8743 112345454 56999974 2488999999997 45421 12222
Q ss_pred EEc-------cC------CeEEEeecCcCC-CCcceEEEeeecCcc
Q psy12724 123 LVL-------PS------GELHIRDVGPED-GYKSYQCRTKHRLTG 154 (167)
Q Consensus 123 ~~~-------~~------g~L~I~~v~~~D-~~G~Y~C~a~n~~~~ 154 (167)
.+. .+ ..|.|++++.+| . |.|+|.|+|...+
T Consensus 522 ~~~~~~~~~~~~g~y~~~s~L~i~~~~~~d~~-~~y~C~~~n~~~~ 566 (581)
T 3o3u_N 522 SVKEQTRRHPETGLFTLQSELMVTPARGGDPR-PTFSCSFSPGLPR 566 (581)
T ss_dssp EEEEEEEECTTTCCEEEEEEEEECCCTTSCSC-CCEEEEEECSSCS
T ss_pred EEEeeeEEcCCCceEEEEEEEEEEeccccCCC-ceEEEEEeccCCC
Confidence 211 11 369999999555 6 8999999999743
No 253
>2eo1_A OBSCN protein, cDNA FLJ14124 FIS, clone mamma1002498; beta-sandwich, IG-fold, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.38 E-value=7.3e-13 Score=88.86 Aligned_cols=74 Identities=23% Similarity=0.414 Sum_probs=58.0
Q ss_pred CeEEEeCCcEEEEeeeCCccCCcceeEEEEeCCCeeeEEeeeecCCceEEEccCC---eEEEeecCcCCCCcceEEEeee
Q psy12724 74 DEHVLKGNSAVLKCHIPSFVADYVAVESWISDQGEELFVDMTESTDGKYLVLPSG---ELHIRDVGPEDGYKSYQCRTKH 150 (167)
Q Consensus 74 ~~~v~~G~~a~l~C~~~~~~~~p~p~i~W~k~~~~~l~~~~~~~~~~r~~~~~~g---~L~I~~v~~~D~~G~Y~C~a~n 150 (167)
+..+.+|+++.|.|.+. +|.|.++|+||+ ..+. .+.++.+..+| .|.|.+++.+|+ |.|+|.|.|
T Consensus 20 ~~~v~~G~~v~L~C~~~----~p~~~v~W~k~g-~~~~------~~~~~~~~~~~~~~~L~I~~~~~~D~-G~Y~C~a~~ 87 (102)
T 2eo1_A 20 EVQAEAGASATLSCEVA----QAQTEVTWYKDG-KKLS------SSSKVRVEAVGCTRRLVVQQAGQAEA-GEYSCEAGG 87 (102)
T ss_dssp EEEEETTCCEEECCBCS----CSSSCCEEEETT-EECC------CCSSEEEEEETTEEEEEETTCCTTTC-SCEEEEETT
T ss_pred cEEEeCCCcEEEEEEec----CCCCceEEEECC-EECC------CCCCEEEEEcCCEEEEEECCCCcccC-EEEEEEcCC
Confidence 35788999999999996 378899999997 5553 24567666555 799999999999 999999987
Q ss_pred cCcceEEEee
Q psy12724 151 RLTGETRLSA 160 (167)
Q Consensus 151 ~~~~~~~l~~ 160 (167)
.. ..+.|.+
T Consensus 88 ~~-~~~~l~V 96 (102)
T 2eo1_A 88 QQ-LSFRLQV 96 (102)
T ss_dssp EE-CCEEEEE
T ss_pred Cc-EEEEEEE
Confidence 64 3455555
No 254
>3mtr_A N-CAM-1, NCAM-1, neural cell adhesion molecule 1; immunoglobulin domain, fibronectin type III repeat, CE adhesion; 1.80A {Homo sapiens}
Probab=99.38 E-value=8.3e-12 Score=93.70 Aligned_cols=129 Identities=14% Similarity=0.204 Sum_probs=86.7
Q ss_pred eceeeEEeEEEEEeCCcEEEEeecCCCCCCcceeeEEeeCCCceeeecC-Cc----------eE--------EEeeeEEE
Q psy12724 11 QYYEAQVYDVFVIKGNAAVFKCNLPSFVSDHLDVVSWADTDGGQYQIDN-QD----------FV--------VSQSYTVN 71 (167)
Q Consensus 11 ~~~~~~~~~~~v~~G~~~~l~C~a~~~~~~~~~~i~W~k~~~~~~~~~~-~~----------~v--------~~g~y~c~ 71 (167)
+.| ..+.+..+.+|+++.|.|.+.+.|.+ .+.|+|++. .+..+. .+ .+ ..|.|+|.
T Consensus 20 P~~-~~p~~~~~~~G~~v~l~C~~~g~p~p---~i~W~~~g~-~l~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~ 94 (215)
T 3mtr_A 20 PKL-QGPVAVYTWEGNQVNITCEVFAYPSA---TISWFRDGQ-LLPSSNYSNIKIYNTPSASYLEVTPDSENDFGNYNCT 94 (215)
T ss_dssp EEE-ECCSEEEECTTCCEEEEEEEEEESCC---EEEEEETTE-ESSCSSSCSEEEEEETTEEEEEECCCSGGGCEEEEEE
T ss_pred Ccc-cCCceEEEECCCCEEEEEEEeecCCC---EEEEEECCe-ECCCCCCccEEEecCCCeeEEEEecCChhhCeEEEEE
Confidence 345 46777899999999999999988764 799999853 343221 11 11 26999998
Q ss_pred ecCe-----------------------EEEeCCcEEEEeeeCCcc-CCcce--eEEEEeCCCeeeEEeeeecCCceEEEc
Q psy12724 72 IMDE-----------------------HVLKGNSAVLKCHIPSFV-ADYVA--VESWISDQGEELFVDMTESTDGKYLVL 125 (167)
Q Consensus 72 ~~~~-----------------------~v~~G~~a~l~C~~~~~~-~~p~p--~i~W~k~~~~~l~~~~~~~~~~r~~~~ 125 (167)
+.+. ....+.++.|.|..+... +.|.+ .+.|.+++. .... ...+.+.
T Consensus 95 a~n~~g~~~~~~~l~v~~~P~~p~~~~~~~~~~~~~l~w~~p~~~~~~pi~~y~v~~~~~~~-~~w~------~~~~~~~ 167 (215)
T 3mtr_A 95 AVNRIGQESLEFILVQADTPSSPSIDQVEPYSSTAQVQFDEPEATGGVPILKYKAEWRAVGE-EVWH------SKWYDAK 167 (215)
T ss_dssp EECSSCEEEEEEEEEECCCCCCCEEEEEEEETTEEEEEEECCSCCCSSCEEEEEEEEEETTC-CCCE------EEEEEHH
T ss_pred EEECCCceEEEEEEEECCCCCCCcceEEEEecceEEEEEecCCccCCCceEEEEEEEEECCC-Cccc------ccccccc
Confidence 8541 123577889999865321 33544 478988763 2110 1111111
Q ss_pred ---cCCeEEEeecCcCCCCcceEEEeeecC
Q psy12724 126 ---PSGELHIRDVGPEDGYKSYQCRTKHRL 152 (167)
Q Consensus 126 ---~~g~L~I~~v~~~D~~G~Y~C~a~n~~ 152 (167)
.++.|.|.++.+.|+ |.|+|.|.|..
T Consensus 168 ~~~~~~~l~i~~L~~~~~-y~~~~~A~N~~ 196 (215)
T 3mtr_A 168 EASMEGIVTIVGLKPETT-YAVRLAALNGK 196 (215)
T ss_dssp HHHHHTEEEEECCCTTCE-EEEEEEEEESS
T ss_pred cccccccEEECCCCCCCE-EEEEEEEEeCC
Confidence 127899999999998 99999999987
No 255
>3rbg_A Cytotoxic and regulatory T-cell molecule; IGV, crtam, structural genomics, PSI-biology, NEW YORK struc genomics research consortium, nysgrc; 2.30A {Homo sapiens}
Probab=99.37 E-value=1.4e-12 Score=90.92 Aligned_cols=76 Identities=20% Similarity=0.346 Sum_probs=56.5
Q ss_pred ecCeEEEeCCcEEEEeeeCCccCCcceeEEEEeCCCeeeEEee-eecCCceEEEcc----CCeEEEeecCcCCCCcceEE
Q psy12724 72 IMDEHVLKGNSAVLKCHIPSFVADYVAVESWISDQGEELFVDM-TESTDGKYLVLP----SGELHIRDVGPEDGYKSYQC 146 (167)
Q Consensus 72 ~~~~~v~~G~~a~l~C~~~~~~~~p~p~i~W~k~~~~~l~~~~-~~~~~~r~~~~~----~g~L~I~~v~~~D~~G~Y~C 146 (167)
+.+..+.+|+++.|.|.+.+ .|.|.++|+++++..+.... ....++|+.+.. ++.|.|.+++.+|+ |.|.|
T Consensus 8 ~~~~~v~~G~~v~L~C~~~~---~p~~~v~W~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~L~I~~v~~~Ds-G~Y~C 83 (124)
T 3rbg_A 8 TETITVEEGQTLTLKCVTSL---RKNSSLQWLTPSGFTIFLNEYPVLKNSKYQLLHHSANQLSITVPNVTLQDE-GVYKC 83 (124)
T ss_dssp EEEEEEETTSCEEEEEECCC---CTTCEEEEECTTSCEEEETTEECSCSSCCEEEEEETTEEEEEESSCCGGGC-EEEEE
T ss_pred CccEEEcCCCCEEEEeEEec---cCCCEEEEECCCCeEEEEeccccccCCcEEEEeCCCCEEEEEECCCChHHC-EEEEE
Confidence 34567889999999999984 48899999987754332100 001345665543 46899999999999 99999
Q ss_pred Eeeec
Q psy12724 147 RTKHR 151 (167)
Q Consensus 147 ~a~n~ 151 (167)
.|.|.
T Consensus 84 ~a~n~ 88 (124)
T 3rbg_A 84 LHYSD 88 (124)
T ss_dssp EEESS
T ss_pred EEEcC
Confidence 99997
No 256
>2wbj_D OB TCR; transmembrane, immune response, T cell receptor, MHC II, MEM receptor, molecular mimicry, multiple sclerosis, immune SYS autoimmunity; HET: NAG BMA MAN; 3.00A {Homo sapiens}
Probab=99.37 E-value=3.5e-12 Score=100.03 Aligned_cols=133 Identities=15% Similarity=0.218 Sum_probs=85.5
Q ss_pred eceeeEEeEEEEEeCCcEEEEeecCCCCCCcceeeEEeeCC-Cce---ee--ec-----------CCc-----------e
Q psy12724 11 QYYEAQVYDVFVIKGNAAVFKCNLPSFVSDHLDVVSWADTD-GGQ---YQ--ID-----------NQD-----------F 62 (167)
Q Consensus 11 ~~~~~~~~~~~v~~G~~~~l~C~a~~~~~~~~~~i~W~k~~-~~~---~~--~~-----------~~~-----------~ 62 (167)
..+...+.++.+.+|+++.|.|.+.+.+ .+.+.|+|++ +.. +. .+ ..| .
T Consensus 25 ~~v~~~p~~v~v~~G~~v~L~C~~~~~~---~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~s 101 (279)
T 2wbj_D 25 AVVSQHPSWVISKSGTSVKIECRSLDFQ---ATTMFWYRQFPKQSLMLMATSNEGSKATYEQGVEKDKFLINHASLTLST 101 (279)
T ss_dssp CCEEEECSEEEEETTSCEEEEEEESSSC---EEEEEEEEECSSSCCEEEEEEESSSCCCCCSSSCSSSEEEEECSSSEEE
T ss_pred ceEEeCCCeEEecCCCeEEEEEEeCCCC---CCeEEEEEeCCCCCeEEEEEEecCCcceecCCccCCcEEEEeCCCCEEE
Confidence 3466778899999999999999997654 3589999864 110 10 00 011 1
Q ss_pred E--------EEeeeEEEecC----------------eE------------E--E--------eCCcEEEEeeeCCccCCc
Q psy12724 63 V--------VSQSYTVNIMD----------------EH------------V--L--------KGNSAVLKCHIPSFVADY 96 (167)
Q Consensus 63 v--------~~g~y~c~~~~----------------~~------------v--~--------~G~~a~l~C~~~~~~~~p 96 (167)
+ .+|.|.|.+.+ .. + . +|+.+.|.|.+.+. .|
T Consensus 102 L~I~~v~~~D~G~Y~C~~~~~~~~~~~~~~~~~~~~l~V~~~~~~~~~P~v~~~~~~~~~~~~g~~v~L~C~~~g~--~P 179 (279)
T 2wbj_D 102 LTVTSAHPEDSSFYICSARDLTSGANNEQFFGPGTRLTVTEDLKNVFPPEVAVFEPSEAEISHTQKATLVCLATGF--YP 179 (279)
T ss_dssp EEESSCCGGGCEEEEEEEEETTCBTSCCEEECCCEEEEEESCGGGCBCCEEEEEECCHHHHHHHSCCEEEEEEEEE--BS
T ss_pred EEEccCCccCCEEEEEEEcccccCCccceeeCCCEEEEEecCCCCCCCCEEEEECCCcccccCCCceEEEEEEeeE--cC
Confidence 1 27999998754 00 1 1 37899999999753 24
Q ss_pred c-eeEEEEeCCCeeeEEeee----------ecCCceEEEccCCeEEEeecCcCC-CCcceEEEeeecC
Q psy12724 97 V-AVESWISDQGEELFVDMT----------ESTDGKYLVLPSGELHIRDVGPED-GYKSYQCRTKHRL 152 (167)
Q Consensus 97 ~-p~i~W~k~~~~~l~~~~~----------~~~~~r~~~~~~g~L~I~~v~~~D-~~G~Y~C~a~n~~ 152 (167)
. |.++|+||+ ..+..... +..++.|.+. ..|.|.+...+| . |.|+|.|.|..
T Consensus 180 ~~~~v~W~k~g-~~l~~~~~~~~~~~~~~~~~~~~~~~~~--s~L~i~~~~~~d~~-~~YtC~v~n~~ 243 (279)
T 2wbj_D 180 DHVELSWWVNG-KEVHSGVSTDPQPLKEQPALNDSRYSLS--SRLRVSATFWQNPR-NHFRCQVQFYG 243 (279)
T ss_dssp SCEEEEEEETT-EECCTTEEECSSCEESSTTSTTCCEEEE--EEEECCSTTTTCTT-CEEEEEEEECC
T ss_pred CCcEEEEEECC-EECCCCcccccccccccccCCCCcEEEE--EEEEEChHHhccCC-CEEEEEEEeCC
Confidence 3 799999987 45421100 0012223222 248888888876 5 67999999975
No 257
>2ens_A Advanced glycosylation END product-specific receptor; beta-sandwich, C2-SET, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.37 E-value=9e-13 Score=87.68 Aligned_cols=68 Identities=26% Similarity=0.505 Sum_probs=55.0
Q ss_pred eEEEecCeEEEeCCcEEEEeeeCCccCCcceeEEEEeCCCeeeEEeeeecCCceEEEccCCeEEEeecCcCCCCcceEEE
Q psy12724 68 YTVNIMDEHVLKGNSAVLKCHIPSFVADYVAVESWISDQGEELFVDMTESTDGKYLVLPSGELHIRDVGPEDGYKSYQCR 147 (167)
Q Consensus 68 y~c~~~~~~v~~G~~a~l~C~~~~~~~~p~p~i~W~k~~~~~l~~~~~~~~~~r~~~~~~g~L~I~~v~~~D~~G~Y~C~ 147 (167)
+...+.+..+.+|+++.|.|.+.+ .|.|.++|+|++ ..+. .. .++.|.|.+++.+|+ |.|+|.
T Consensus 13 i~~~p~~~~v~~G~~v~l~C~~~g---~p~~~v~W~k~~-~~~~------~~------~~~~L~i~~v~~~d~-G~Y~C~ 75 (96)
T 2ens_A 13 LVVEPEGGAVAPGGTVTLTCEVPA---QPSPQIHWMKDG-VPLP------LP------PSPVLILPEIGPQDQ-GTYSCV 75 (96)
T ss_dssp CEEESTTSEECTTCEEEEECCCSS---CSSCCCCCEESS-SBCS------SC------CCSEEEEESCCTTTC-EEEECE
T ss_pred EEECCCCCEEcCCCeEEEEEEEcc---CCCCEEEEEECC-EECc------CC------CCCEEEECCCCcccC-EEEEEE
Confidence 444556778899999999999974 588899999987 4442 11 357899999999999 999999
Q ss_pred eeecC
Q psy12724 148 TKHRL 152 (167)
Q Consensus 148 a~n~~ 152 (167)
|.|..
T Consensus 76 a~n~~ 80 (96)
T 2ens_A 76 ATHSS 80 (96)
T ss_dssp ECCSS
T ss_pred EEeCC
Confidence 99964
No 258
>2qsq_A Carcinoembryonic antigen-related cell adhesion MO; glycoprotein, GPI-anchor, immunoglobulin DOMA lipoprotein, membrane; 1.95A {Homo sapiens} PDB: 2qst_A 2ver_N* 2gk2_A
Probab=99.36 E-value=5.6e-12 Score=87.31 Aligned_cols=80 Identities=16% Similarity=0.231 Sum_probs=58.8
Q ss_pred EEEecCeEEEeCCcEEEEeeeCCccCCcceeEEEEeCCCe----eeEEee--------eecCCceEEEccCCeEEEeecC
Q psy12724 69 TVNIMDEHVLKGNSAVLKCHIPSFVADYVAVESWISDQGE----ELFVDM--------TESTDGKYLVLPSGELHIRDVG 136 (167)
Q Consensus 69 ~c~~~~~~v~~G~~a~l~C~~~~~~~~p~p~i~W~k~~~~----~l~~~~--------~~~~~~r~~~~~~g~L~I~~v~ 136 (167)
+..+....+.+|++|.|+|...+ + +.+.++|+|++.. .+.... .+...+|..+.+||+|.|+|++
T Consensus 4 ~i~~~p~~~~~G~~v~L~~~~~p--~-~~~~i~W~kg~~~~~~~~I~~y~~~~~~~~~~~~~~gR~~~~~ngSL~I~nvt 80 (111)
T 2qsq_A 4 TIESTPFNVAEGKEVLLLVHNLP--Q-HLFGYSWYKGERVDGNRQIIGYVIGTQQATPGPAYSGREIIYPNASLLIQNII 80 (111)
T ss_dssp EEEEESSEEETTSCEEEEEESCC--S-SEEEEEEEESSSCCGGGEEEEEETTTTEEEECTTCCSCEEECTTSCEEECSCC
T ss_pred EEEeccceeccCCCEEEEEeCCC--C-CceEEEEEeCCCCCCCcEEEEEECCCcceecCcccCCcEEEecCCcEEEccCc
Confidence 44555568899999999998531 2 4567999997521 111100 0113579999999999999999
Q ss_pred cCCCCcceEEEeeecC
Q psy12724 137 PEDGYKSYQCRTKHRL 152 (167)
Q Consensus 137 ~~D~~G~Y~C~a~n~~ 152 (167)
.+|+ |.|+|.+.|..
T Consensus 81 ~~D~-G~Ytc~v~~~~ 95 (111)
T 2qsq_A 81 QNDA-GFYTLHVIKSD 95 (111)
T ss_dssp GGGC-EEEEEEEEETT
T ss_pred ccCC-eEEEEEEEeCC
Confidence 9999 99999999974
No 259
>1gsm_A Madcam-1, mucosal addressin cell adhesion molecule-1; cell adhesion protein, immunoglobulin fold, I-SET fold, cell adhesion glycoprotein; 1.9A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 PDB: 1bqs_A*
Probab=99.36 E-value=1.2e-11 Score=94.97 Aligned_cols=132 Identities=15% Similarity=0.193 Sum_probs=81.0
Q ss_pred ceeeEEeE--EEEEeCCcEEEEeecCCCCCCcceeeEEeeCCCce---eeecCCce--E------EEeeeEEEecC----
Q psy12724 12 YYEAQVYD--VFVIKGNAAVFKCNLPSFVSDHLDVVSWADTDGGQ---YQIDNQDF--V------VSQSYTVNIMD---- 74 (167)
Q Consensus 12 ~~~~~~~~--~~v~~G~~~~l~C~a~~~~~~~~~~i~W~k~~~~~---~~~~~~~~--v------~~g~y~c~~~~---- 74 (167)
.|++++.+ +.|.+|+++.|.|.+ +.+.+ .+.|.|.+.+... ........ + ..|.|.|.+.+
T Consensus 7 ~~~V~pp~~~v~v~~G~sv~L~C~a-~~p~P-~~~i~W~~~~~~l~~~~~~~~~~~L~I~~v~~~d~G~Y~C~a~n~~~~ 84 (210)
T 1gsm_A 7 PLQVEPPEPVVAVALGASRQLTCRL-ACADR-GASVQWRGLDTSLGAVQSDTGRSVLTVRNASLSAAGTRVCVGSCGGRT 84 (210)
T ss_dssp SEEEESCCSEEEEETTCCEEEEEEE-CCSST-TCEEEEESSTTTTCCEEEESSEEEEEECSCCGGGCEEEEEEEEETTEE
T ss_pred CEEEeCCCCceEEeCCCCEEEEEEC-CCCCC-CcceEEeecccccCcEEecCCccEEEECccCcccCceEEEEEEeCCCc
Confidence 46666665 589999999999999 66643 3379999976321 11111111 1 26999998732
Q ss_pred --------------e-E-----EEeCCcEEEEeeeCCccCCc----ceeEEEEeCCCeeeEEeee-e------------c
Q psy12724 75 --------------E-H-----VLKGNSAVLKCHIPSFVADY----VAVESWISDQGEELFVDMT-E------------S 117 (167)
Q Consensus 75 --------------~-~-----v~~G~~a~l~C~~~~~~~~p----~p~i~W~k~~~~~l~~~~~-~------------~ 117 (167)
. . ...|+.+ |.|.+.+. .| .+.++|+||+ ..|..... + .
T Consensus 85 ~~~~~~ltV~~~P~~~~i~~~~~~~g~~~-l~C~a~g~--~P~~~~~lti~Wlk~~-~~L~~~~~~~~~~~~~~~~~~~~ 160 (210)
T 1gsm_A 85 FQHTVQLLVYAFPNQLTVSPAALVPGDPE-VACTAHKV--TPVDPNALSFSLLVGG-QELEGAQALGPEVQEEEEEPQGD 160 (210)
T ss_dssp EEEEEEEEEEBCCSEEEEESSSBCTTCCE-EEEEEEEE--BCCCTTTEEEEEEETT-EECTTCEECCCEEEECTTCCSSC
T ss_pred eEEEEEEEEEecCCCcEEccceEEeCCce-EEEEeCCC--CCCCCCCcEEEEEECC-EEcccccccccceecccccccCC
Confidence 1 1 1258888 99999753 25 4689999998 55521100 0 0
Q ss_pred CCceEEEccCCeEEEeecCcCCCCcceEEEeeecC
Q psy12724 118 TDGKYLVLPSGELHIRDVGPEDGYKSYQCRTKHRL 152 (167)
Q Consensus 118 ~~~r~~~~~~g~L~I~~v~~~D~~G~Y~C~a~n~~ 152 (167)
...-|.+ ...|.+......|. +.|+|.|.+.+
T Consensus 161 ~~~~~~v--ts~~~~~~~~~D~~-~~~tC~a~~~L 192 (210)
T 1gsm_A 161 EDVLFRV--TERWRLPPLGTPVP-PALYCQATMRL 192 (210)
T ss_dssp CCCCEEE--EEEEECCCCCSSCC-SEEEEEEEEEE
T ss_pred cceEEEE--EEEEeecCCcccCC-ceEEEEEEeeC
Confidence 0001111 12344446666665 89999999988
No 260
>1l6x_A Immunoglobulin gamma-1 heavy chain constant regio; IGG1 FC, FC complex, immune system; HET: NAG BMA MAN GAL FUL; 1.65A {Homo sapiens} SCOP: b.1.1.2 b.1.1.2 PDB: 2iwg_A* 3v7m_A* 3d6g_A* 3agv_A* 1oqo_A* 1oqx_A* 3v95_A* 2wah_A* 3sgj_A* 3sgk_A* 2dtq_A* 2dts_A* 3ave_A* 3ay4_A* 3do3_A* 2gj7_A* 1t83_A* 1t89_A* 1dn2_A* 3dnk_A ...
Probab=99.36 E-value=3.2e-13 Score=101.48 Aligned_cols=121 Identities=13% Similarity=0.223 Sum_probs=76.5
Q ss_pred EeCCcEEEEeecCCCCCC-cceeeEEeeCCCceeee----------cCCce---EE---------EeeeEEEecCe----
Q psy12724 23 IKGNAAVFKCNLPSFVSD-HLDVVSWADTDGGQYQI----------DNQDF---VV---------SQSYTVNIMDE---- 75 (167)
Q Consensus 23 ~~G~~~~l~C~a~~~~~~-~~~~i~W~k~~~~~~~~----------~~~~~---v~---------~g~y~c~~~~~---- 75 (167)
.+|+++.|.|.+.+.+.. +-..|+|+|++.. +.. ++... .+ .|.|+|.+.+.
T Consensus 16 ~~G~~v~L~C~~~g~~p~~~~~~v~W~k~~~~-~~~~~~~~~~~~~~g~~~~~~~l~i~~~d~~d~g~Y~C~a~n~~~~~ 94 (207)
T 1l6x_A 16 MISRTPEVTCVVVDVSHEDPEVKFNWYVDGVE-VHNAKTKPREEQYNSTYRVVSVLTVLHQDWLNGKEYKCKVSNKALPA 94 (207)
T ss_dssp CTTSCCEEEEEEEEECSSSCCCEEEEEETTEE-ECCCEECCCEECTTSCEEEEEEEECCHHHHHTTCCEEEEEECTTSSS
T ss_pred ecCCceEEEEEEecccCCCCCeEEEEEECCcc-ccCcccCCceeccCCcEEEEEEEEEEHHHccCCceEEEEEEcCcCCc
Confidence 689999999999876531 1137999998632 211 11111 11 69999987430
Q ss_pred ------------------EE-------EeCCcEEEEeeeCCccCCcc-eeEEEEeCCCeeeEEeeeecCCceEEEccCCe
Q psy12724 76 ------------------HV-------LKGNSAVLKCHIPSFVADYV-AVESWISDQGEELFVDMTESTDGKYLVLPSGE 129 (167)
Q Consensus 76 ------------------~v-------~~G~~a~l~C~~~~~~~~p~-p~i~W~k~~~~~l~~~~~~~~~~r~~~~~~g~ 129 (167)
.+ +.|+.+.|.|.+.+. .|. +.++|+||+ ..+... ...++....+|.
T Consensus 95 ~~~~~v~~~~~~~~~P~v~~~~~~~~~~~~~~~~L~C~~~g~--~P~~~~v~W~k~g-~~~~~~----~~~~~~~~~~gt 167 (207)
T 1l6x_A 95 PIEKTISKAKGQPREPQVYTLPPSRDELTKNQVSLTCLVKGF--YPSDIAVEWESNG-QPENNY----KTTPPVLDSDGS 167 (207)
T ss_dssp CEEEEECCCCSCCBCCEEEEECCCGGGGGSSEEEEEEEEEEE--BSSCCEEEEEETT-EEECCE----EECCCEECTTSC
T ss_pred ceEEEeccCCCCCcCCEEEEECCChHHhcCCcEEEEEEEeCe--ECCCeEEEEEECC-eeccCc----cccCceECCCCC
Confidence 01 136679999999863 244 489999997 455311 011222334553
Q ss_pred ------EEEeecCcCCCCcceEEEeeecC
Q psy12724 130 ------LHIRDVGPEDGYKSYQCRTKHRL 152 (167)
Q Consensus 130 ------L~I~~v~~~D~~G~Y~C~a~n~~ 152 (167)
|.|.....+|. |.|+|.|.|..
T Consensus 168 ~~~~s~l~i~~~~~~~~-g~YtC~a~n~~ 195 (207)
T 1l6x_A 168 FFLYSKLTVDKSRWQQG-NVFSCSVMHEA 195 (207)
T ss_dssp EEEEEEEEEEHHHHHTT-CCEEEEEECTT
T ss_pred EEEEEEEEECHHHcCCC-CEEEEEEEcCC
Confidence 55555556788 99999999986
No 261
>3qr2_A Basigin; CD147, EMMPRIN, immunoglobulin-like domain, beta sheet, STRU genomics, berkeley structural genomics center, BSGC, cell A; 2.30A {Homo sapiens} PDB: 3qqn_A
Probab=99.35 E-value=7.6e-13 Score=93.58 Aligned_cols=82 Identities=15% Similarity=0.233 Sum_probs=59.2
Q ss_pred eeeEEEecCeEEEeCCcEEEEeeeCCccCCcceeEEEEeCCCeeeEEeeee--c--CCceEEEc------cCCeEEEeec
Q psy12724 66 QSYTVNIMDEHVLKGNSAVLKCHIPSFVADYVAVESWISDQGEELFVDMTE--S--TDGKYLVL------PSGELHIRDV 135 (167)
Q Consensus 66 g~y~c~~~~~~v~~G~~a~l~C~~~~~~~~p~p~i~W~k~~~~~l~~~~~~--~--~~~r~~~~------~~g~L~I~~v 135 (167)
+.+...+.+..+.+|+++.|.|.+. +.|.|.++|+|++. .+...... . ...++.+. .++.|.|.++
T Consensus 22 P~~~~~p~~~~v~~G~~v~L~C~~~---g~P~p~i~W~k~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~I~~v 97 (137)
T 3qr2_A 22 AGFVQAPLSQQRWVGGSVELHCEAV---GSPVPEIQWWFEGQ-GPNDICSQLWDGARLDRVHIHATYHQHAASTISIDTL 97 (137)
T ss_dssp CEEEECCCCEEEETTSCEEEEEEEE---CSSCCEEEEEEEES-STTCCCEECCTTHHHHTEEEEEEESSSEEEEEEECSC
T ss_pred CeEEcCCCCEEEeCCCCEEEEEEEe---eecCCeEEEEECCC-CccccceeecccCcccceEEecccccccceEEEECCC
Confidence 4455566778899999999999997 45999999999863 32110000 0 01233322 4568999999
Q ss_pred CcCCCCcceEEEeeecC
Q psy12724 136 GPEDGYKSYQCRTKHRL 152 (167)
Q Consensus 136 ~~~D~~G~Y~C~a~n~~ 152 (167)
+.+|+ |.|+|.|.|..
T Consensus 98 ~~~D~-G~Y~C~a~N~~ 113 (137)
T 3qr2_A 98 VEEDT-GTYECRASNDP 113 (137)
T ss_dssp CGGGC-EEEEEEEECCT
T ss_pred CcccC-EEEEEEEEecC
Confidence 99999 99999999987
No 262
>1za6_B IGG heavy chain; immunoglobulin fold, CH2-domain-deletion, immune system; 2.80A {Homo sapiens} SCOP: b.1.1.1 b.1.1.2 b.1.1.2
Probab=99.35 E-value=8.9e-13 Score=106.13 Aligned_cols=131 Identities=16% Similarity=0.276 Sum_probs=85.5
Q ss_pred eEEeEEEEEeCCcEEEEeecCCCCCCcceeeEEeeCC-Cceee----e------------cCCc------------eE--
Q psy12724 15 AQVYDVFVIKGNAAVFKCNLPSFVSDHLDVVSWADTD-GGQYQ----I------------DNQD------------FV-- 63 (167)
Q Consensus 15 ~~~~~~~v~~G~~~~l~C~a~~~~~~~~~~i~W~k~~-~~~~~----~------------~~~~------------~v-- 63 (167)
.++.++.+.+|+++.|.|.+.+.+.+ .+.+.|+|++ +..+. . ...| .+
T Consensus 5 ~~p~~~~v~~G~~v~L~C~~~~~~~~-~~~v~W~k~~~g~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~~L~I 83 (344)
T 1za6_B 5 VQSGAEVVKPGASVKISCKASGYTFT-DHAIHWVKQNPGQRLEWIGYFSPGNDDFKYNERFKGKATLTADTSASTAYVEL 83 (344)
T ss_dssp EECCCEEECTTCCEEEEEEEESSCTT-SSCEEEEEECSSSCEEEEEEEETTTTEEEECTTTBTTEEEEEETTTTEEEEEE
T ss_pred eCCCCeEEeCCCcEEEEEEcCCcccc-ccEEEEEEECCCCCcEEEEEEecCCCceEECcccCCcEEEEEecCCCEEEEEE
Confidence 45667899999999999999876422 2579999873 22210 0 0011 11
Q ss_pred ------EEeeeEEEecCe----------E----------E---------EeCCcEEEEeeeCCccCCcc-eeEEEEeCCC
Q psy12724 64 ------VSQSYTVNIMDE----------H----------V---------LKGNSAVLKCHIPSFVADYV-AVESWISDQG 107 (167)
Q Consensus 64 ------~~g~y~c~~~~~----------~----------v---------~~G~~a~l~C~~~~~~~~p~-p~i~W~k~~~ 107 (167)
.+|.|.|.+.+. . + .+|+++.|.|.+.+. .|. |.++|+|++.
T Consensus 84 ~~v~~~D~G~Y~C~~~n~~~~~~~~~~l~V~~~~~~~P~i~~~~~~~~~~~g~~v~L~C~~~g~--~P~~~~v~W~k~g~ 161 (344)
T 1za6_B 84 SSLRSEDTAVYFCTRSLNMAYWGQGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDY--FPEPVTVSWNSGAL 161 (344)
T ss_dssp CSCCGGGCEEEEEEETTTTCEECCCEEEEECSSCCBCCEEEEECCSCTTTSSSEEEEEEEEEEE--BSSCCCEEETTTTB
T ss_pred CCCCcccCEEEEEEEecCcceecCcEEEEEecCCCCCCeEEEccccccccCCCcEEEEEEEeeE--ECCCeEEEEecCCc
Confidence 279999987430 0 1 268899999999753 254 6899999873
Q ss_pred eeeE-Eee--eecCCceEEEccCCeEEEeecCcCCCCcceEEEeeecCc
Q psy12724 108 EELF-VDM--TESTDGKYLVLPSGELHIRDVGPEDGYKSYQCRTKHRLT 153 (167)
Q Consensus 108 ~~l~-~~~--~~~~~~r~~~~~~g~L~I~~v~~~D~~G~Y~C~a~n~~~ 153 (167)
.+. ... ....+++|... +.|.|.+++.+| |.|+|.|.|...
T Consensus 162 -~~~~~~~~~~~~~~~~~~~~--s~L~i~~~~~~d--G~Y~C~a~n~~~ 205 (344)
T 1za6_B 162 -TSGVHTFPAVLQSSGLYSLS--SVVTVPSSSLGT--QTYICNVNHKPS 205 (344)
T ss_dssp -CTTEEECCCEECTTSCEEEE--EEEEEETTHHHH--BCEEEEEEEGGG
T ss_pred -cCceeECCCeECCCCCEEEE--EEEEEcHHHcCC--CcEEEEEEeCCC
Confidence 321 000 00123455432 479999998855 999999999873
No 263
>1op3_H FAB 2G12, heavy chain; domain-swapped FAB 2G12, anti-carbohydrate antibody, immune system; HET: MAN; 1.75A {Homo sapiens} SCOP: b.1.1.1 b.1.1.2 PDB: 1om3_H* 1op5_H* 3oay_M* 1zlu_H* 1zlv_H* 1zlw_H* 2oqj_B 1zls_H* 3ob0_H* 3oau_H* 3oaz_H* 3ghe_H 3eyf_B 3eyo_B 3ghb_H 3c2a_H 1q1j_H 2fl5_H*
Probab=99.34 E-value=7.6e-12 Score=95.04 Aligned_cols=130 Identities=18% Similarity=0.329 Sum_probs=84.1
Q ss_pred eEEeEEEEEeCCcEEEEeecCCCCCCcceeeEEeeCC-Ccee---e-ec------------CCc------------eE--
Q psy12724 15 AQVYDVFVIKGNAAVFKCNLPSFVSDHLDVVSWADTD-GGQY---Q-ID------------NQD------------FV-- 63 (167)
Q Consensus 15 ~~~~~~~v~~G~~~~l~C~a~~~~~~~~~~i~W~k~~-~~~~---~-~~------------~~~------------~v-- 63 (167)
.++....+.+|+++.|.|.+.+.+.. .+.+.|+|++ +..+ . .+ ..| .+
T Consensus 5 ~qp~~~~v~~G~~v~L~C~~~~~~~~-~~~v~W~r~~~g~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~sL~I 83 (225)
T 1op3_H 5 VESGGGLVKAGGSLILSCGVSNFRIS-AHTMNWVRRVPGGGLEWVASISTSSTYRDYADAVKGRFTVSRDDLEDFVYLQM 83 (225)
T ss_dssp EEECCEEEETTCCEEEEEEEESSCGG-GSCEEEEEECTTSCEEEEEEECGGGCCEEECTTTTTTEEEEEETTTTEEEEEE
T ss_pred EcCCCeEecCCCCEEEEEEecCcccC-CceEEEEEeCCCCCcEEEEEEccCCCccccCcccCCceEEEecCCCCEEEEEE
Confidence 45777899999999999999876521 2469998864 2211 0 00 011 11
Q ss_pred ------EEeeeEEEecCe------------------EE-------------------EeCCcEEEEeeeCCccCCcce-e
Q psy12724 64 ------VSQSYTVNIMDE------------------HV-------------------LKGNSAVLKCHIPSFVADYVA-V 99 (167)
Q Consensus 64 ------~~g~y~c~~~~~------------------~v-------------------~~G~~a~l~C~~~~~~~~p~p-~ 99 (167)
.+|.|.|.+.+. .| .+|+++.|.|.+.+. .|.| .
T Consensus 84 ~~v~~~D~G~Y~C~~~~~~~~~~~~~~~~~~~~~~L~V~~~~~~~P~v~~~~~~~~~~~g~~v~L~C~~~g~--~P~p~~ 161 (225)
T 1op3_H 84 HKMRVEDTAIYYCARKGSDRLSDNDPFDAWGPGTVVTVSPASTKGPSVFPLAPSSKSTSGGTAALGCLVKDY--FPEPVT 161 (225)
T ss_dssp CSCCGGGCEEEEEEEECCSSCCSSCCEEEECCCEEEEEESCSCBCCEEEEECCCTTCCCCCEEEEEEEEEEE--BSSCCE
T ss_pred CCCChhhCEEEEEEEecCCCccccccceeecCCEEEecccCCCcCCeEEEecccccccCCCcEEEEEEEEeE--ECCCeE
Confidence 169999986431 01 258899999999753 3666 8
Q ss_pred EEEEeCCCeeeE-Eee--eecCCceEEEccCCeEEEeecCcCCCCcceEEEeeecC
Q psy12724 100 ESWISDQGEELF-VDM--TESTDGKYLVLPSGELHIRDVGPEDGYKSYQCRTKHRL 152 (167)
Q Consensus 100 i~W~k~~~~~l~-~~~--~~~~~~r~~~~~~g~L~I~~v~~~D~~G~Y~C~a~n~~ 152 (167)
++|+|++. .+. ... ....+++|.+ .+.|.|.+++.+| |.|+|.|.|..
T Consensus 162 v~W~~~~~-~~~~~~~~~~~~~~g~~~~--~s~L~i~~~~~~~--g~Y~C~a~n~~ 212 (225)
T 1op3_H 162 VSWNSGAL-TSGVHTFPAVLQSSGLYSL--SSVVTVPSSSLGT--QTYICNVNHKP 212 (225)
T ss_dssp EECCTTSC-CTTCEECCCEECTTSCEEE--EEEEEEEGGGTTC--CCCCEEEEEGG
T ss_pred EEEecCCC-cCCeEecCceeCCCCCEEE--EEEEEEechhcCC--CcEEEEEEcCC
Confidence 99999873 321 000 0012344443 2469999998776 99999999976
No 264
>2fbj_H IGA-kappa J539 FAB (heavy chain); immunoglobulin; HET: NAG FUC; 1.95A {Mus musculus} SCOP: b.1.1.1 b.1.1.2 PDB: 1mcp_H 2mcp_H*
Probab=99.34 E-value=1.7e-11 Score=92.87 Aligned_cols=132 Identities=16% Similarity=0.321 Sum_probs=86.2
Q ss_pred eeEEeEEEEEeCCcEEEEeecCCCCCCcceeeEEeeCC-Cce---ee-ec------------CCc------------eE-
Q psy12724 14 EAQVYDVFVIKGNAAVFKCNLPSFVSDHLDVVSWADTD-GGQ---YQ-ID------------NQD------------FV- 63 (167)
Q Consensus 14 ~~~~~~~~v~~G~~~~l~C~a~~~~~~~~~~i~W~k~~-~~~---~~-~~------------~~~------------~v- 63 (167)
..++....+.+|+++.|.|.+.+.+.. .+.+.|+|.+ +.. +. .+ ..| .+
T Consensus 4 ~~q~~~~~v~~G~~v~L~C~~~~~~~~-~~~v~W~r~~~~~~~~~l~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~~L~ 82 (220)
T 2fbj_H 4 LLESGGGLVQPGGSLKLSCAASGFDFS-KYWMSWVRQAPGKGLEWIGEIHPDSGTINYTPSLKDKFIISRDNAKNSLYLQ 82 (220)
T ss_dssp EEEECCEEECTTCCEEEEEEEESSCGG-GSCEEEEEECTTSCEEEEEEECTTSSCEEECTTTTTTEEEEECSSSCEEEEE
T ss_pred EecCCCeEecCCCcEEEEEEecCccCC-CceEEEEEECCCCCeEEEEEEccCCCceecCCccCCcEEEEeeCCCCEEEEE
Confidence 346677999999999999999876421 2469998853 211 11 00 011 11
Q ss_pred -------EEeeeEEEecCe-----------------------EE--------EeCCcEEEEeeeCCccCCcc--eeEEEE
Q psy12724 64 -------VSQSYTVNIMDE-----------------------HV--------LKGNSAVLKCHIPSFVADYV--AVESWI 103 (167)
Q Consensus 64 -------~~g~y~c~~~~~-----------------------~v--------~~G~~a~l~C~~~~~~~~p~--p~i~W~ 103 (167)
.+|.|.|.+.+. .+ ..|+.+.|.|.+.+. .|. +.++|+
T Consensus 83 I~~v~~~DsG~Y~C~~~~~~~~~~~~~~~~~L~V~~~~~~~P~v~~~~~~~~~~g~~v~L~C~~~g~--~P~~~~~v~W~ 160 (220)
T 2fbj_H 83 MSKVRSEDTALYYCARLHYYGYNAYWGQGTLVTVSAESARNPTIYPLTLPPALSSDPVIIGCLIHDY--FPSGTMNVTWG 160 (220)
T ss_dssp ECSCCGGGCEEEEEEEEETTTEEEEECCCEEEEECSSCCBCCEEEEECCCSSSCCSSEEEEEEEEEE--BSCCCEEEEES
T ss_pred ECCCChhhCEEEEEEEeccccccceecCCEEEEecCCCCCCCEEEEeecccccCCCcEEEEEEEEeE--ECCCcEEEEEe
Confidence 169999976320 01 258899999999753 254 789999
Q ss_pred eCCCeeeEE-ee--eecCCceEEEccCCeEEEeecCcCCCCcceEEEeeecC
Q psy12724 104 SDQGEELFV-DM--TESTDGKYLVLPSGELHIRDVGPEDGYKSYQCRTKHRL 152 (167)
Q Consensus 104 k~~~~~l~~-~~--~~~~~~r~~~~~~g~L~I~~v~~~D~~G~Y~C~a~n~~ 152 (167)
|++. .+.. .. ....++.|.+. ..|.|.+...+|+ |.|+|.|.|..
T Consensus 161 ~~~~-~~~~~~~~~~~~~~g~~~~~--s~L~i~~~~~~d~-g~ytC~v~n~~ 208 (220)
T 2fbj_H 161 KSGK-DITTVNFPPALASGGRYTMS--NQLTLPAVECPEG-ESVKCSVQHDS 208 (220)
T ss_dssp CCCS-SCEEEECCCEECSSSCEEEE--EEEEECGGGSCTT-CEEEEEEEETT
T ss_pred cCCE-ecceEecCceECCCCCEEEE--EEEEECHHHcCCC-CeEEEEEEcCC
Confidence 9973 4311 10 00123445442 3599999999998 99999999987
No 265
>3s35_X Vascular endothelial growth factor receptor 2; antibody, KDR, VEGF receptor, cancer, immune system-transfer complex; HET: NAG; 2.20A {Homo sapiens} PDB: 3s36_X 3s37_X
Probab=99.34 E-value=2.4e-12 Score=88.93 Aligned_cols=83 Identities=16% Similarity=0.126 Sum_probs=55.0
Q ss_pred eEEEeCCcEEEEeeeCCccCCcceeEEEEeCCCeeeEEe-eeecCCceEE----EccCCeEEEeecCcCCCCcceEEEee
Q psy12724 75 EHVLKGNSAVLKCHIPSFVADYVAVESWISDQGEELFVD-MTESTDGKYL----VLPSGELHIRDVGPEDGYKSYQCRTK 149 (167)
Q Consensus 75 ~~v~~G~~a~l~C~~~~~~~~p~p~i~W~k~~~~~l~~~-~~~~~~~r~~----~~~~g~L~I~~v~~~D~~G~Y~C~a~ 149 (167)
..+.+|+++.|.|.+.+. ..|.+.++|+|++. .+... ........+. ...++.|.|.+++.+|+ |.|+|.|.
T Consensus 18 v~v~~G~~v~L~C~~~g~-p~~~~~i~W~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~L~I~~v~~~Ds-G~Y~C~a~ 94 (122)
T 3s35_X 18 IELSVGEKLVLNCTARTE-LNVGIDFNWEYPSS-KHQHKKLVNRDLKTQSGSEMKKFLSTLTIDGVTRSDQ-GLYTCAAS 94 (122)
T ss_dssp EEEEETCCEEEEEEEEEC-TTCCCEEEEECSCT-TCCHHHHBCCSCCEEEETTEEEEEEEEEESSCCGGGC-EEEEEEEE
T ss_pred EEEecCCeEEEEEEEEcC-CCCcEEEEEECCCc-ccCCceeeeeccccccCCceeeEEEEEEECCCCcccC-EEEEEEEc
Confidence 378899999999999743 24567899999874 22100 0000111111 11345799999999999 99999999
Q ss_pred ecC---cceEEEee
Q psy12724 150 HRL---TGETRLSA 160 (167)
Q Consensus 150 n~~---~~~~~l~~ 160 (167)
|.. ...+.|.+
T Consensus 95 n~~g~~~~~~~l~V 108 (122)
T 3s35_X 95 SGLMTKKNSTFVRV 108 (122)
T ss_dssp CSSCEEEEEEEEEE
T ss_pred cCCCceEEEEEEEE
Confidence 987 33445544
No 266
>1hng_A CD2; T lymphocyte adhesion glycoprotein; 2.80A {Rattus rattus} SCOP: b.1.1.1 b.1.1.3
Probab=99.33 E-value=7.2e-12 Score=92.28 Aligned_cols=75 Identities=15% Similarity=0.182 Sum_probs=57.2
Q ss_pred eEEEeCCcEEEEeeeCCccCCcceeEEEEeCCCeeeEEee----eecCCceEEEccCCeEEEeecCcCCCCcceEEEeee
Q psy12724 75 EHVLKGNSAVLKCHIPSFVADYVAVESWISDQGEELFVDM----TESTDGKYLVLPSGELHIRDVGPEDGYKSYQCRTKH 150 (167)
Q Consensus 75 ~~v~~G~~a~l~C~~~~~~~~p~p~i~W~k~~~~~l~~~~----~~~~~~r~~~~~~g~L~I~~v~~~D~~G~Y~C~a~n 150 (167)
..+.+|+++.|+|...+. ..|.|.|+|+|++ ..+.... .....+|+.+..+|.|.|++++.+|+ |.|+|.|.|
T Consensus 6 v~~~~G~~v~L~c~~~~~-~~~~~~i~W~k~~-~~i~~~~~~~~~~~~~~r~~~~~~gsL~I~~v~~~D~-G~Y~C~~~n 82 (176)
T 1hng_A 6 VWGALGHGINLNIPNFQM-TDDIDEVRWERGS-TLVAEFKRKMKPFLKSGAFEILANGDLKIKNLTRDDS-GTYNVTVYS 82 (176)
T ss_dssp EEEETTSCEEECCTTCCC-CTTEEEEEEEETT-EEEEEEETTSCCEESSTTEEECTTSCEEESSCCGGGC-EEEEEEEEE
T ss_pred EEEEcCCcEEEcCCCCCc-ccccccEEEEeCC-ceeEEEcCCCeecCCCCeEEECCCCcEEEcccccccC-EEEEEEEEe
Confidence 456899999999954221 2578899999997 4442110 00136788888899999999999999 999999999
Q ss_pred cC
Q psy12724 151 RL 152 (167)
Q Consensus 151 ~~ 152 (167)
..
T Consensus 83 ~~ 84 (176)
T 1hng_A 83 TN 84 (176)
T ss_dssp TT
T ss_pred CC
Confidence 76
No 267
>2cr6_A KIAA1556 protein, obscurin; IG-fold, immunoglobulin domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.33 E-value=1.2e-12 Score=90.13 Aligned_cols=82 Identities=18% Similarity=0.292 Sum_probs=60.6
Q ss_pred eEEEecCeEEEeCCcEEEEeeeCCccCCcceeEEEEeCCCeeeEEeeeecCCceEEEc-cC---CeEEEeecCcCCCCcc
Q psy12724 68 YTVNIMDEHVLKGNSAVLKCHIPSFVADYVAVESWISDQGEELFVDMTESTDGKYLVL-PS---GELHIRDVGPEDGYKS 143 (167)
Q Consensus 68 y~c~~~~~~v~~G~~a~l~C~~~~~~~~p~p~i~W~k~~~~~l~~~~~~~~~~r~~~~-~~---g~L~I~~v~~~D~~G~ 143 (167)
+...+.+..+.+|+++.|.|.+. +.|.|.++|+||+ ..+. .+.++.+. .+ ..|.|.+++.+|+ |.
T Consensus 16 ~~~~~~~~~v~~G~~v~l~C~~~---g~p~p~v~W~k~g-~~l~------~~~~~~~~~~~~~~~~L~I~~v~~~D~-G~ 84 (115)
T 2cr6_A 16 IIEDLEDVDVQEGSSATFRCRIS---PANYEPVHWFLDK-TPLH------ANELNEIDAQPGGYHVLTLRQLALKDS-GT 84 (115)
T ss_dssp EEECCCEEEEETTSCEECCCEEE---STTCCSCEEEESS-CEEC------CSSSCCBCCBTTTBCCBEECSCCTTTC-EE
T ss_pred EeccCccEEEeCCCcEEEEEEEc---CCCCCccEEEECC-EECC------CCCcEEEEEcCCCEEEEEEcCCChhhC-EE
Confidence 34445677899999999999997 4588899999997 4553 24455444 22 2699999999999 99
Q ss_pred eEEEeeecCcceEEEeee
Q psy12724 144 YQCRTKHRLTGETRLSAT 161 (167)
Q Consensus 144 Y~C~a~n~~~~~~~l~~~ 161 (167)
|+|.+.+. ...+.|.+.
T Consensus 85 Y~C~~g~~-~~~~~L~V~ 101 (115)
T 2cr6_A 85 IYFEAGDQ-RASAALRVT 101 (115)
T ss_dssp EEEEETTE-ECCEEEEEE
T ss_pred EEEEECCe-eEEEEEEEE
Confidence 99996544 345566553
No 268
>1igt_B IGG2A intact antibody - MAB231; intact immunoglobulin V region C region, immunoglobulin; HET: NAG FUL BMA MAN GAL FUC; 2.80A {Mus musculus} SCOP: b.1.1.1 b.1.1.2 b.1.1.2 b.1.1.2
Probab=99.33 E-value=7.5e-13 Score=109.75 Aligned_cols=125 Identities=18% Similarity=0.318 Sum_probs=79.5
Q ss_pred EEeCCcEEEEeecCCC-CCCcceeeEEeeCCCce-ee--e---cCCce-----E-E------EeeeEEEecCe-------
Q psy12724 22 VIKGNAAVFKCNLPSF-VSDHLDVVSWADTDGGQ-YQ--I---DNQDF-----V-V------SQSYTVNIMDE------- 75 (167)
Q Consensus 22 v~~G~~~~l~C~a~~~-~~~~~~~i~W~k~~~~~-~~--~---~~~~~-----v-~------~g~y~c~~~~~------- 75 (167)
+.+|+++.|.|.+.+. |.+ ..+.|.|++... +. + ....+ + + .|.|+|.+.+.
T Consensus 135 ~~~g~~v~L~C~~~g~~P~p--~~v~W~~~~~~~~~~~~~~~~~~~~~~~~s~L~i~~~~~~dg~Y~C~a~n~~~~~~~~ 212 (444)
T 1igt_B 135 DTTGSSVTLGCLVKGYFPEP--VTLTWNSGSLSSGVHTFPAVLQSDLYTLSSSVTVTSSTWPSQSITCNVAHPASSTKVD 212 (444)
T ss_dssp CCCSSCEEEEEEEEEEBSSC--CEEEEGGGTBCTTEEECCCEEETTEEEEEEEEEECSTTTTTSCCEEEEEETTTTEEEE
T ss_pred CCCCCcEEEEEEEcceeCCC--cEEEEecCCCCCCeEecCccccCCcEEEEEEEEEchhhcCCCeEEEEEEeCCCCcceE
Confidence 4689999999999875 432 279999986531 00 0 00111 0 0 28899976320
Q ss_pred ---------------------------E-----------EEeCCcEEEEeeeCCccC-CcceeEEEEeCCCeeeEEee--
Q psy12724 76 ---------------------------H-----------VLKGNSAVLKCHIPSFVA-DYVAVESWISDQGEELFVDM-- 114 (167)
Q Consensus 76 ---------------------------~-----------v~~G~~a~l~C~~~~~~~-~p~p~i~W~k~~~~~l~~~~-- 114 (167)
. +.+|+++.|.|.+.+... .|.+.++|+|++ ..+....
T Consensus 213 ~~i~~~~~~~~~~~~~~~~~~~~~~~p~v~~~~p~~~~~~~~G~~~~L~C~~~g~~~~p~~~~v~W~k~~-~~~~~~~~~ 291 (444)
T 1igt_B 213 KKIEPRGPTIKPCPPCKCPAPNLLGGPSVFIFPPKIKDVLMISLSPIVTCVVVDVSEDDPDVQISWFVNN-VEVHTAQTQ 291 (444)
T ss_dssp EECCCCCCSCCCCCCCSCCCSCCCCCCEEEEECCCHHHHHCTTSCCEEEEEEEEECTTCCCCEEEEEETT-EECSSTTCB
T ss_pred EEeccCCCCcccCCccccCCcccCCCceEEecCCchhheeecCCCcEEEEEEeecccCCCCeEEEEEECC-ccccCcccc
Confidence 1 145999999999975310 124689999998 4442110
Q ss_pred --eecCCceEEEccCCeEEEeecCcCCCCcceEEEeeecC
Q psy12724 115 --TESTDGKYLVLPSGELHIRDVGPEDGYKSYQCRTKHRL 152 (167)
Q Consensus 115 --~~~~~~r~~~~~~g~L~I~~v~~~D~~G~Y~C~a~n~~ 152 (167)
....++++. ..+.|.|.+++.+|+ |.|+|.|.|..
T Consensus 292 ~~~~~~~~~~~--~~~~L~I~~v~~~d~-G~Y~C~a~n~~ 328 (444)
T 1igt_B 292 THREDYNSTLR--VVSALPIQHQDWMSG-KEFKCKVNNKD 328 (444)
T ss_dssp CCEEECSSSEE--EEEEEECCHHHHHTT-CEEEEEEECTT
T ss_pred cceeCCCCcEE--EEEEEEEcHHHhccC-CcEEEEEEcCC
Confidence 000111221 234799999999999 99999999986
No 269
>3nl4_H Antigen binding fragment,immunoglobulin IGG - HEA; FAB, rabbit, conformation-specific, amyloid, immune system; 1.54A {Oryctolagus cuniculus} PDB: 4hbc_H
Probab=99.32 E-value=1.1e-11 Score=93.17 Aligned_cols=128 Identities=13% Similarity=0.160 Sum_probs=77.1
Q ss_pred eEEeEEEEEeCCcEEEEeecCCCCCCcceeeEEeeCC-Ccee--e----ec---------CCc----------eE-----
Q psy12724 15 AQVYDVFVIKGNAAVFKCNLPSFVSDHLDVVSWADTD-GGQY--Q----ID---------NQD----------FV----- 63 (167)
Q Consensus 15 ~~~~~~~v~~G~~~~l~C~a~~~~~~~~~~i~W~k~~-~~~~--~----~~---------~~~----------~v----- 63 (167)
.++.++.|.+|+++.|.|.+.+.+.+ .+.+.|+|.+ +... . .+ ..| .+
T Consensus 4 ~~p~~~~v~~G~~v~L~C~~~~~~~~-~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v 82 (215)
T 3nl4_H 4 EESGGRLVTPGTPLTLACTVSGFSLN-TYSMFWVRQAPGKGLQWIGIISNFGVIYYATWAKGRFTISKTSTTVDLKITSP 82 (215)
T ss_dssp EEECCCEECTTCCEEEEEEEESSCTT-TCCEEEEEECTTSCEEEEEEECTTCCEEECGGGTTTEEEEECSSEEEEEESSC
T ss_pred EcCCCEEEcCCCcEEEEEEecCcccC-CCeEEEEEECCCCCeEEEEEEecCCccccCCcccCCEEEEeeCCEEEEEECCC
Confidence 46778899999999999999764322 2579998742 2111 0 00 011 01
Q ss_pred ---EEeeeEEEecCe--------------E-------------------EEeCCcEEEEeeeCCccCCcceeEEEEeCCC
Q psy12724 64 ---VSQSYTVNIMDE--------------H-------------------VLKGNSAVLKCHIPSFVADYVAVESWISDQG 107 (167)
Q Consensus 64 ---~~g~y~c~~~~~--------------~-------------------v~~G~~a~l~C~~~~~~~~p~p~i~W~k~~~ 107 (167)
.+|.|.|.+.+. . +..|+.+.|.|.+.+.. .+...++|+|++
T Consensus 83 ~~~D~G~Y~C~~~~~~~~~~~~~~~~~~l~V~~~~~~~P~i~~~~~~~~~~~g~~v~l~C~~~~~~-p~~~~v~W~~~g- 160 (215)
T 3nl4_H 83 TTEDTATYFCVRKYGSEWGGDLWGPGTLVTVSSGQPKAPSVFPLAPCCGDTPSSTVTLGCLVKGYL-PEPVTVTWNSGT- 160 (215)
T ss_dssp CGGGCEEEEEEEECSSSSCEEEECCCEEEEECSSCCBCCEEEEECCCTTCCC--CEEEEEEEEEEB-SSCCEEEEGGGT-
T ss_pred CcccCEEEEEEEecCCCccceEEcCCEEEEEeCCCcCCCEEEEecCCccccCCCcEEEEEEEeeee-CCCeEEEEeeCC-
Confidence 279999987431 0 13489999999997641 123457899987
Q ss_pred eeeEEeeeecCCceEEEccCCeEEE---eecCcCCCCcceEEEeeecC
Q psy12724 108 EELFVDMTESTDGKYLVLPSGELHI---RDVGPEDGYKSYQCRTKHRL 152 (167)
Q Consensus 108 ~~l~~~~~~~~~~r~~~~~~g~L~I---~~v~~~D~~G~Y~C~a~n~~ 152 (167)
..+... ........+|.+.| -.+...| |.|+|.|.|..
T Consensus 161 ~~~~~~-----~~~~~~~~~g~~~~~s~l~v~~~d--g~ytC~v~~~~ 201 (215)
T 3nl4_H 161 LTNGVR-----TFPSVRQSSGLYSLSSVVSVTSSS--QPVTCNVAHPA 201 (215)
T ss_dssp BCTTEE-----ECCCEECTTSCEEEEEEEEECC-----CCEEEEEEGG
T ss_pred EECCeE-----ecCceECCCCCEEEEEEEEEeccC--CEEEEEEEeCC
Confidence 333211 11122345676666 5677888 99999999987
No 270
>2oz4_A Intercellular adhesion molecule 1; IGSF domain, structural plasticity, cell-surface dimerizatio adhesion; HET: NAG FUC; 2.70A {Homo sapiens} SCOP: b.1.1.3 b.1.1.4 b.1.1.4 PDB: 1p53_A*
Probab=99.32 E-value=1.5e-11 Score=95.09 Aligned_cols=111 Identities=18% Similarity=0.275 Sum_probs=77.3
Q ss_pred EEEEeCCcEEEEeecCC-CCCCcceeeEEeeCCCceeee----cCCce----E------EEe--eeEEEecC--------
Q psy12724 20 VFVIKGNAAVFKCNLPS-FVSDHLDVVSWADTDGGQYQI----DNQDF----V------VSQ--SYTVNIMD-------- 74 (167)
Q Consensus 20 ~~v~~G~~~~l~C~a~~-~~~~~~~~i~W~k~~~~~~~~----~~~~~----v------~~g--~y~c~~~~-------- 74 (167)
..+.+|+++.|.|.+.+ .|.+ -..++|+|++. .+.. +++.. + ..| .|+|.+.+
T Consensus 13 ~~v~~G~~v~l~C~~~g~~p~p-~~~v~W~k~~~-~l~~~~~~~~~~~~~~~~~~~~~~d~g~g~Y~C~a~n~~~~~~~~ 90 (265)
T 2oz4_A 13 RVLEVDTQGTVVCSLDGLFPVS-EAQVHLALGDQ-RLNPTVTYGNDSFSAKASVSVTAEDEGTQRLTCAVILGNQSQETL 90 (265)
T ss_dssp SEEETTEEEEEEEEEESCSCGG-GCEEEEEETTE-ECCCEEEECSSEEEEEEEEEECGGGCEEEEEEEEEEETTEEEEEE
T ss_pred ceEecCCCEEEEEEccCCCCCc-ceEEEEEeCCE-ECCceEeeCCCeEEEEeecccccccCCcceEEEEEecCCCCcEEE
Confidence 36889999999999988 5532 12799999864 2321 22211 1 134 59998632
Q ss_pred -----------------eEEEeCCcEEEEeeeCCccCCcceeEEEEeCCCeeeEEeeeecCCceEEEccCCeEEEeecCc
Q psy12724 75 -----------------EHVLKGNSAVLKCHIPSFVADYVAVESWISDQGEELFVDMTESTDGKYLVLPSGELHIRDVGP 137 (167)
Q Consensus 75 -----------------~~v~~G~~a~l~C~~~~~~~~p~p~i~W~k~~~~~l~~~~~~~~~~r~~~~~~g~L~I~~v~~ 137 (167)
..+.+|+++.|.|.+. |.|.++| |+ ..+. ..+ ..+.|.|..+..
T Consensus 91 ~~l~V~~~p~p~~~~~~~~v~~G~~v~l~C~~~-----p~~~i~W--~g-~~~~------~~~-----~~~~l~i~~~~~ 151 (265)
T 2oz4_A 91 QTVTIYSFPAPNVILTKPEVSEGTEVTVKCEAH-----PRAKVTL--NG-VPAQ------PLG-----PRAQLLLKATPE 151 (265)
T ss_dssp EEEEEECCCCCEEEESCSEEETTCEEEEEEECC-----TTSEEEE--SS-CSSS------CCS-----SEECCEEECCGG
T ss_pred EEEEEeCCCCceeecCCceecCCCcEEEEEEcc-----CCCEEEE--CC-EEcc------CCC-----CcEEEEEccccc
Confidence 2456799999999985 7889999 55 4442 111 125699999999
Q ss_pred CCCCcceEEEeeecC
Q psy12724 138 EDGYKSYQCRTKHRL 152 (167)
Q Consensus 138 ~D~~G~Y~C~a~n~~ 152 (167)
+|+ |.|+|.|.|..
T Consensus 152 ~~~-g~Y~C~a~n~~ 165 (265)
T 2oz4_A 152 DNG-RSFSCSATLEV 165 (265)
T ss_dssp GTT-EEEEEEEEEEC
T ss_pred cCC-ceEEEEEEcCC
Confidence 998 99999999754
No 271
>3r08_E T-cell surface glycoprotein CD3 epsilon chain; antibody, T-cell receptor, signalling, immune SY; 4.10A {Cricetulus migratorius}
Probab=99.32 E-value=1.4e-12 Score=85.95 Aligned_cols=60 Identities=28% Similarity=0.400 Sum_probs=48.2
Q ss_pred ecCeEEEeCCcEEEEeeeCCccCCcceeEEEEeCCCeeeEEeeeecCCceEEEccCCeEEEeec-CcCCCCcceEEEeee
Q psy12724 72 IMDEHVLKGNSAVLKCHIPSFVADYVAVESWISDQGEELFVDMTESTDGKYLVLPSGELHIRDV-GPEDGYKSYQCRTKH 150 (167)
Q Consensus 72 ~~~~~v~~G~~a~l~C~~~~~~~~p~p~i~W~k~~~~~l~~~~~~~~~~r~~~~~~g~L~I~~v-~~~D~~G~Y~C~a~n 150 (167)
++...++.|++|+|.|.+.+ +|. |+|+||+ ..+. .+ .++.|.|.++ +.+|+ |.|+|.|.+
T Consensus 6 p~~~v~~~G~~v~L~C~~~g---~P~--i~W~kdg-~~l~-------~~-----~~~~L~I~~v~~~~Ds-G~Y~C~A~t 66 (82)
T 3r08_E 6 IEYKVSISGTSVELTCPLDS---DEN--LKWEKNG-QELP-------QK-----HDKHLVLQDFSEVEDS-GYYVCYTPA 66 (82)
T ss_dssp CCCEEEEETTEEEEECSSCC---CSS--CEEEETT-EECT-------TC-----CSSCCBCCSCCTTTTC-SCEEEECSS
T ss_pred CceeEEEcCCeEEEEEECCC---CCc--EEEEECC-EECc-------CC-----CCCEEEECccCccCcC-EEEEEEEcc
Confidence 44567889999999999984 463 8999997 4542 11 4678999996 78999 999999986
No 272
>2w59_A IGY FCU3-4; immunoglobulin, avian, immune system; HET: NAG MAN; 1.75A {Gallus gallus}
Probab=99.32 E-value=1.9e-12 Score=99.29 Aligned_cols=131 Identities=14% Similarity=0.290 Sum_probs=82.7
Q ss_pred eEEeEEEEEeCCcEEEEeecCCC-CCCcceeeEEeeCCCceeee-------cCCc-e-----E--------EEeeeEEEe
Q psy12724 15 AQVYDVFVIKGNAAVFKCNLPSF-VSDHLDVVSWADTDGGQYQI-------DNQD-F-----V--------VSQSYTVNI 72 (167)
Q Consensus 15 ~~~~~~~v~~G~~~~l~C~a~~~-~~~~~~~i~W~k~~~~~~~~-------~~~~-~-----v--------~~g~y~c~~ 72 (167)
..|....+.+|+++.|.|.+.++ |.++ ..|+|+|++...+.. +.+. + + ..|.|+|.+
T Consensus 18 ~~p~~~~v~~G~~v~L~C~~~g~~P~~p-~~v~W~~~g~~~~~~~~~~~~~~~~g~~~~~s~L~I~~~~~~D~g~Y~C~~ 96 (231)
T 2w59_A 18 IPPSPGELYISLDAKLRCLVVNLPSDSS-LSVTWTREKSGNLRPDPMVLQEHFNGTYSASSAVPVSTQDWLSGERFTCTV 96 (231)
T ss_dssp ECCCHHHHHTSCCCEEEEEEEEESCCTT-CEEEEECSSSSCCCCCCCEEEECTTSCEEEEEEEECCHHHHHTTCCEEEEE
T ss_pred eCcChhhcccCCceEEEEEEeCccCCCC-eEEEEEcCCeeccccccccceECCCCcEEEEEEEEecchhccCCCEEEEEE
Confidence 45555667899999999999885 4221 269999875433111 1111 1 1 158999987
Q ss_pred cCe--------------------EE--E-------eCCcEEEEeeeCCccCCc-ceeEEEEeCCCeeeEEee------ee
Q psy12724 73 MDE--------------------HV--L-------KGNSAVLKCHIPSFVADY-VAVESWISDQGEELFVDM------TE 116 (167)
Q Consensus 73 ~~~--------------------~v--~-------~G~~a~l~C~~~~~~~~p-~p~i~W~k~~~~~l~~~~------~~ 116 (167)
.+. .+ . .|+.+.|.|.+.++ .| .+.++|+||+ ..+.... ..
T Consensus 97 ~~~~~~~~~~~~v~~~~~~~~~P~v~v~~~~~~~~~~~~~~L~C~~~g~--~P~~~~v~W~k~g-~~l~~~~~~~~~~~~ 173 (231)
T 2w59_A 97 QHEELPLPLSKSVYRNTGPTTPPLIYPFAPHPEELSLSRVTLSCLVRGF--RPRDIEIRWLRDH-RAVPATEFVTTAVLP 173 (231)
T ss_dssp ECTTCSSCEEEEECCCCSCCBCCEEEEECCCGGGGGSSEEEEEEEEEEE--BSSCCEEEEEETT-EECCGGGCEECCCEE
T ss_pred EcCCCCCceEEEEecCCCCCcCCEEEEeCCCHHHhccCceEEEEEEEec--cCCCcEEEEEECC-EECCCcccccCcccc
Confidence 430 11 1 15679999999864 23 4789999997 4552110 00
Q ss_pred c--------CC-ceEEEccCCeEEEeecCcCCCCcceEEEeeecC
Q psy12724 117 S--------TD-GKYLVLPSGELHIRDVGPEDGYKSYQCRTKHRL 152 (167)
Q Consensus 117 ~--------~~-~r~~~~~~g~L~I~~v~~~D~~G~Y~C~a~n~~ 152 (167)
. .+ +.|.+. ..|.|.....+|. |.|+|.|.|..
T Consensus 174 ~~~~~~~~~~d~gt~~~~--s~L~i~~~~~~~~-g~YtC~v~n~~ 215 (231)
T 2w59_A 174 EERTANGAGGDGDTFFVY--SKMSVETAKWNGG-TVFACMAVHEA 215 (231)
T ss_dssp CCTTSCC---CCCCEEEE--EEEEEEHHHHHTT-CCEEEEEECTT
T ss_pred CcccccccCCCCCeEEEE--EEEEEeHHHcCCC-CcEEEEEEcCC
Confidence 0 11 222221 3588999999998 99999999987
No 273
>2id5_A Lingo-1, leucine rich repeat neuronal 6A; CNS-specific LRR-IG containing, ligand binding protein,membr protein; HET: NAG MAN; 2.70A {Homo sapiens}
Probab=99.32 E-value=1.8e-12 Score=108.69 Aligned_cols=72 Identities=22% Similarity=0.430 Sum_probs=57.0
Q ss_pred cCeEEEeCCcEEEEeeeCCccCCcceeEEEEeCCCeeeEEeeeecCCceEEEccCCeEEEeecCcCCCCcceEEEeeecC
Q psy12724 73 MDEHVLKGNSAVLKCHIPSFVADYVAVESWISDQGEELFVDMTESTDGKYLVLPSGELHIRDVGPEDGYKSYQCRTKHRL 152 (167)
Q Consensus 73 ~~~~v~~G~~a~l~C~~~~~~~~p~p~i~W~k~~~~~l~~~~~~~~~~r~~~~~~g~L~I~~v~~~D~~G~Y~C~a~n~~ 152 (167)
.+..+.+|+++.|.|.+. |+|.|.++|+|++. .+... ...+|+.+..+|.|.|.+++.+|+ |.|+|.|.|..
T Consensus 393 ~~~~v~~G~~v~l~C~~~---g~P~p~i~W~~~~~-~~~~~---~~~~~~~~~~~~~L~i~~v~~~d~-G~Y~C~a~N~~ 464 (477)
T 2id5_A 393 QQVFVDEGHTVQFVCRAD---GDPPPAILWLSPRK-HLVSA---KSNGRLTVFPDGTLEVRYAQVQDN-GTYLCIAANAG 464 (477)
T ss_dssp EEEEEETTCCEEECCCEE---EESCCEEEEECTTS-CBC----------CEECTTSCEEESSCCSTTC-EEEEEEEEETT
T ss_pred ccEEEeCCCeEEEEEecc---ccCCCEEEEEECCc-ccccc---CCCceEEeCCCCEEEEeeCChHHC-EEEEEEEEeCC
Confidence 345788999999999998 45999999999984 44221 135678888899999999999999 99999999987
No 274
>2c1o_A IGK-C protein; FAB fragment, enantioselective, finrozole, immune system, antibody, ENA11His antibody, immunoglobulin domain; 2.75A {Mus musculus}
Probab=99.31 E-value=6e-12 Score=96.67 Aligned_cols=114 Identities=18% Similarity=0.297 Sum_probs=56.3
Q ss_pred EEEEEeCCcEEEEeecCCCCCCcceeeEEeeCCCceeeecCCceEEEeeeEEEecCeEEEeCCcEEEEeeeCCccCCc--
Q psy12724 19 DVFVIKGNAAVFKCNLPSFVSDHLDVVSWADTDGGQYQIDNQDFVVSQSYTVNIMDEHVLKGNSAVLKCHIPSFVADY-- 96 (167)
Q Consensus 19 ~~~v~~G~~~~l~C~a~~~~~~~~~~i~W~k~~~~~~~~~~~~~v~~g~y~c~~~~~~v~~G~~a~l~C~~~~~~~~p-- 96 (167)
...|..++++.|.|.|.+..... ..+.|.. ...+.-.+.+..+.+|++|.|.|.+.+. |
T Consensus 8 ~~~v~~~dsg~Y~C~a~g~~~~~-~~~~~~~---------------~~~~~~~p~~~~v~~G~~v~L~C~~~~~---~~~ 68 (254)
T 2c1o_A 8 AELVRPGTSVKLSCKASGYSFTN-YWMNWLR---------------ELVMTQSPLTLSVTIGQPASISCKSSQS---LLY 68 (254)
T ss_dssp ----------------------------------------------CCCEEEECSEEEECTTSCEEEEEEESSC---CBC
T ss_pred cceecCCccEEEEEcCchhhhhh-hhhheee---------------ceeEEeCCceEEecCCCcEEEEeeccCc---ccc
Confidence 34588999999999998543210 0111211 1112223456788899999999999753 5
Q ss_pred ---ceeEEEEeCC-CeeeEE--e----eeecCCceEEEccCC---eEEEeecCcCCCCcceEEEeeecC
Q psy12724 97 ---VAVESWISDQ-GEELFV--D----MTESTDGKYLVLPSG---ELHIRDVGPEDGYKSYQCRTKHRL 152 (167)
Q Consensus 97 ---~p~i~W~k~~-~~~l~~--~----~~~~~~~r~~~~~~g---~L~I~~v~~~D~~G~Y~C~a~n~~ 152 (167)
.|.++|+|++ +..+.. . ......+|+.+..++ .|.|.+++.+|+ |.|+|.|.|..
T Consensus 69 ~~~~~~v~W~k~~~g~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~D~-G~Y~C~a~n~~ 136 (254)
T 2c1o_A 69 SNGKTYLNWLLQRPGQSPKRLIYLVSKLDSGDPDRFTGSGSGTDFTLKISRVEAEDL-GIYYCVQGSHF 136 (254)
T ss_dssp SSSCBCEEEEEECTTSCCEEEEETTTEECTTCCTTEEEEEETTEEEEEESSCCGGGC-SEEEEEECSSS
T ss_pred cCCCCceEEEEeCCCCCceEEEEeccccCCCccceEEEecCCCEEEEEECcCCcccC-EEEEEEEEcCc
Confidence 4889999853 222210 0 000123677665433 799999999999 99999999974
No 275
>3to4_D NKT vbeta2 (mouse variable domain, human constant; mouse CD1D, mouse NKT, immune system; HET: AGH NAG; 3.10A {Homo sapiens}
Probab=99.31 E-value=2.2e-11 Score=94.09 Aligned_cols=129 Identities=16% Similarity=0.210 Sum_probs=83.5
Q ss_pred eEEeEEEEEeCCcEEEEeecCCCCCCcceeeEEeeCC-Cce---e-------------------e--ecCC--ceE----
Q psy12724 15 AQVYDVFVIKGNAAVFKCNLPSFVSDHLDVVSWADTD-GGQ---Y-------------------Q--IDNQ--DFV---- 63 (167)
Q Consensus 15 ~~~~~~~v~~G~~~~l~C~a~~~~~~~~~~i~W~k~~-~~~---~-------------------~--~~~~--~~v---- 63 (167)
..|..+.+.+|+++.|.|.+.+.+. +.+.|+|.. +.. + . .+.. +.+
T Consensus 6 q~p~~v~v~~G~~v~L~C~~~~~~~---~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~L~I~~v~ 82 (253)
T 3to4_D 6 QNPRWRLVPRGQAVNLRCILKNSQY---PWMSWYQQDLQKQLQWLFTLRSPGDKEVKSLPGADYLATRVTDTELRLQVAN 82 (253)
T ss_dssp EECSEEEEESSCCEEEEEECSCTTC---CCEEEEEEETTCCEEEEEEECSTTCEEEEEETTEEEEEECCSSSCCEEEEES
T ss_pred eCCCeEEEeCCCcEEEEEEeCCCCc---ceEEEEEECCCCCcEEEEEECCCcceecCCccCCcEEEEeCCCCeEEEccCC
Confidence 4577899999999999999887664 369998731 110 0 0 0000 111
Q ss_pred --EEeeeEEEecC----------------eEE--------------E--------eCCcEEEEeeeCCccCCcce-eEEE
Q psy12724 64 --VSQSYTVNIMD----------------EHV--------------L--------KGNSAVLKCHIPSFVADYVA-VESW 102 (167)
Q Consensus 64 --~~g~y~c~~~~----------------~~v--------------~--------~G~~a~l~C~~~~~~~~p~p-~i~W 102 (167)
.+|.|.|.+.+ ..| . .|+.+.|.|.+.+. .|.| .++|
T Consensus 83 ~~DsG~Y~C~~~~~~~~~~~~~~~~~~t~l~V~~~~~~~~~P~v~~~~~~~~~~~~g~~~~L~C~~~g~--~P~~i~v~W 160 (253)
T 3to4_D 83 MSQGRTLYCTSSADHWTNTGQLYFGEGSKLTVLEDLKNVFPPEVAVFEPSEAEISHTQKATLVCLATGF--YPDHVELSW 160 (253)
T ss_dssp CSSCEEEEEEEECSCCSTTCCEEECCCEEEEEESCSTTCBCCEEEEEECCHHHHHHHSEEEEEEEEEEE--BSSCEEEEE
T ss_pred hhhCeEEEEEEecCCCCcccceEECCCEEEEEecCCCCCCCCeEEEeCCChhhcccCCceEEEEEEceE--ECCcEEEEE
Confidence 27999998741 111 1 25899999999863 3666 7899
Q ss_pred EeCCCeeeEEeeee----------cCCceEEEccCCeEEEeecCcCC-CCcceEEEeeecC
Q psy12724 103 ISDQGEELFVDMTE----------STDGKYLVLPSGELHIRDVGPED-GYKSYQCRTKHRL 152 (167)
Q Consensus 103 ~k~~~~~l~~~~~~----------~~~~r~~~~~~g~L~I~~v~~~D-~~G~Y~C~a~n~~ 152 (167)
+||+ ..+...... +.++.|.+. ..|.|.....+| . |.|+|.|.|..
T Consensus 161 ~k~g-~~l~~~~~~~~~~~~~~~~~~~g~~~~~--s~l~i~~~~~~d~~-~~ytC~v~h~~ 217 (253)
T 3to4_D 161 WVNG-KEVHSGVSTDPQPLKEQPALNDSRYALS--SRLRVSATFWQNPR-NHFRCQVQFYG 217 (253)
T ss_dssp EETT-EEECTTEEECSSCEESSTTCTTCCEEEE--EEEEEEHHHHTCTT-CEEEEEEEECC
T ss_pred EECC-EECCCceecccccccccccCCCCCEEEE--EEEEECHHHhccCC-CEEEEEEEeCC
Confidence 9987 555311000 023344332 368888888888 6 79999999975
No 276
>3rbs_A Myomesin-1; immunoglobulin C-SET domain, contractIle protein; 1.85A {Homo sapiens}
Probab=99.31 E-value=3.4e-12 Score=96.65 Aligned_cols=70 Identities=17% Similarity=0.267 Sum_probs=55.0
Q ss_pred ecCeEEEeCCcEEEEeeeCCccCCcceeEEEEeCCCeeeEEeeeecCCceEEEccC---C--eEEEeecCcCCCCcceEE
Q psy12724 72 IMDEHVLKGNSAVLKCHIPSFVADYVAVESWISDQGEELFVDMTESTDGKYLVLPS---G--ELHIRDVGPEDGYKSYQC 146 (167)
Q Consensus 72 ~~~~~v~~G~~a~l~C~~~~~~~~p~p~i~W~k~~~~~l~~~~~~~~~~r~~~~~~---g--~L~I~~v~~~D~~G~Y~C 146 (167)
..+..+.+|+.+.|.|.+.+ ++|.|.++|+||+ ..+. .+.++.+..+ | .|.|.+++.+|+ |.|+|
T Consensus 9 ~~~~~v~eg~~v~l~c~~~~--~~P~p~i~W~kng-~~l~------~~~~~~~~~~~~~g~~~L~I~~v~~~D~-G~Y~C 78 (207)
T 3rbs_A 9 ELAVEILEKGQVRFWMQAEK--LSGNAKVNYIFNE-KEIF------EGPKYKMHIDRNTGIIEMFMEKLQDEDE-GTYTF 78 (207)
T ss_dssp EEEEEECGGGCEEEEEECSC--CCSCCEEEEEETT-EEEC------SSSSCEEEECTTTCEEEEEESCCCGGGC-EEEEE
T ss_pred CCceEEEeCCeEEEEEEEec--CCCCCEEEEEECC-EECc------cCCCEEEEEeCCCCEEEEEECCCChhhC-EEEEE
Confidence 34567899999999999864 4699999999998 5664 2344444323 3 599999999999 99999
Q ss_pred Eeeec
Q psy12724 147 RTKHR 151 (167)
Q Consensus 147 ~a~n~ 151 (167)
.|.|.
T Consensus 79 ~a~Ng 83 (207)
T 3rbs_A 79 QLQDG 83 (207)
T ss_dssp EEEET
T ss_pred EEECC
Confidence 99994
No 277
>1mju_H Immunoglobulin MS6-12; catalytic antibody, ester hydrolysis, esterolytic, FAB, immune system; 1.22A {Mus musculus} SCOP: b.1.1.1 b.1.1.2 PDB: 1mjj_B 1mie_H 1mj7_H* 1mj8_H 1mh5_B* 4aeh_H 2y5t_A 2vwe_E 2op4_H 2ntf_H 3loh_C 1e4x_H 2vl5_A 1e4x_I 1e4w_H 3opz_H 3oz9_H 1plg_H 1hi6_B 1cfn_B ...
Probab=99.31 E-value=1.6e-11 Score=93.65 Aligned_cols=131 Identities=15% Similarity=0.185 Sum_probs=81.6
Q ss_pred eeEEeEEEEEeCCcEEEEeecCCCCCCcceeeEEeeCC-Cce---e---eec----------CCc------------eE-
Q psy12724 14 EAQVYDVFVIKGNAAVFKCNLPSFVSDHLDVVSWADTD-GGQ---Y---QID----------NQD------------FV- 63 (167)
Q Consensus 14 ~~~~~~~~v~~G~~~~l~C~a~~~~~~~~~~i~W~k~~-~~~---~---~~~----------~~~------------~v- 63 (167)
..++....+.+|+++.|.|.+.+.+.. .+.+.|+|++ +.. + ..+ ..| .+
T Consensus 4 l~qp~~~~v~~G~~v~L~C~~~~~~~~-~~~v~W~r~~~g~~~~~l~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~sL~ 82 (227)
T 1mju_H 4 LQQPGAELVKPGASVKLSCKASGYTFT-NYWINWVKQRPGQGLEWIGNIYPGSSYTHYNEKFKNKATLTVDTSSSTAYMQ 82 (227)
T ss_dssp EECCSEEEECTTCCEEEEEEEESSCGG-GSCEEEEEECTTSCEEEEEEEETTTTEEEECGGGTTTEEEEEETTTTEEEEE
T ss_pred EcCCCCeEEcCCCCEEEEEEecCCccc-cceEEEEEeCCCCCcEEEEEEeccCCceeeCCccCCcEEEEEeCCCCeEEEE
Confidence 345778899999999999999876521 2469999864 221 1 000 011 11
Q ss_pred -------EEeeeEEEecCe------------------------------EEEeCCcEEEEeeeCCccCCcce-eEEEEeC
Q psy12724 64 -------VSQSYTVNIMDE------------------------------HVLKGNSAVLKCHIPSFVADYVA-VESWISD 105 (167)
Q Consensus 64 -------~~g~y~c~~~~~------------------------------~v~~G~~a~l~C~~~~~~~~p~p-~i~W~k~ 105 (167)
.+|.|.|.+.+. .+..|+.+.|.|.+.+. .|.| .++|+|+
T Consensus 83 I~~v~~~D~G~Y~C~~~~~~~~~~~~~~~L~V~~~~~~~P~v~~~~~~~~~~~g~~v~L~C~~~g~--~P~p~~v~W~~~ 160 (227)
T 1mju_H 83 LSSLTSDDSAVYYCANKLGWFPYWGQGTLVTVSAAKTTAPSVYPLAPVCGDTSGSSVTLGCLVKGY--FPEPVTLTWNSG 160 (227)
T ss_dssp ECSCCGGGCEEEEEEEEETTEEEECCCEEEEECSSCCBCCEEEEECCCC------CEEEEEEEEEE--BSSCCEEEEGGG
T ss_pred ECCCCcccCEEEEEEECCCCceEEcCcEEEEEcCCCCCCCEEEEecCCccccCCCcEEEEEEeecE--eCCCeEEEEecC
Confidence 169999986320 12358899999999753 3666 8999998
Q ss_pred CCeeeEEeeee--cCCceEEEccCCeEEEeecCcCCCCcceEEEeeecC
Q psy12724 106 QGEELFVDMTE--STDGKYLVLPSGELHIRDVGPEDGYKSYQCRTKHRL 152 (167)
Q Consensus 106 ~~~~l~~~~~~--~~~~r~~~~~~g~L~I~~v~~~D~~G~Y~C~a~n~~ 152 (167)
+ ..+...... ...++|.. .+.|.|.+++.+| |.|+|.|.|..
T Consensus 161 g-~~~~~~~~~~~~~~g~~~~--~s~L~i~~~~~~~--g~Y~C~a~n~~ 204 (227)
T 1mju_H 161 S-LSSGVHTFPAVLQSDLYTL--SSSVTVTSSTWPS--QSITCNVAHPA 204 (227)
T ss_dssp T-BCTTEEECCCEEETTEEEE--EEEEEECTTTTTT--SCCEEEEEEGG
T ss_pred C-CcCCcEECCceecCCeEEE--EEEEEEchhhcCC--CeEEEEEEECC
Confidence 7 332110000 01134432 3579999988855 99999999976
No 278
>2xot_A Amphoterin-induced protein 1; cell adhesion, neuronal protein, neurite growth regulation; HET: NAG BMA; 2.00A {Mus musculus}
Probab=99.30 E-value=4.7e-12 Score=103.35 Aligned_cols=80 Identities=21% Similarity=0.400 Sum_probs=62.0
Q ss_pred cCeEEEeCCcEEEEeeeCCccCCcceeEEEEeCCCeeeEEeeeecCCceEEEccCCeEEEeecCcCCCCcceEEEeeecC
Q psy12724 73 MDEHVLKGNSAVLKCHIPSFVADYVAVESWISDQGEELFVDMTESTDGKYLVLPSGELHIRDVGPEDGYKSYQCRTKHRL 152 (167)
Q Consensus 73 ~~~~v~~G~~a~l~C~~~~~~~~p~p~i~W~k~~~~~l~~~~~~~~~~r~~~~~~g~L~I~~v~~~D~~G~Y~C~a~n~~ 152 (167)
.+..+.+|+++.|.|.+. | |.|.++|+|+++..+... ....|+.+ .+|.|.|.+++.+|+ |.|+|.|.|..
T Consensus 254 ~~v~v~~G~~~~l~C~~~---g-p~p~i~W~~~~~~~~~~~---~~~~r~~~-~~~~L~I~~v~~~D~-G~Y~C~a~N~~ 324 (361)
T 2xot_A 254 SAWEAHLGDTLTIRCDTK---Q-QGMTKVWVSPSNEQVLSQ---GSNGSVSV-RNGDLFFKKVQVEDG-GVYTCYAMGET 324 (361)
T ss_dssp CCCEEETTCCEEECCCCS---S-TTCEEEEECTTSCBCCSC---CSSSSEEE-ETTEEEESSCCTTSC-EEEEEEEECSS
T ss_pred cCceecCCCeEEEEeEee---C-CCCeEEEEeCCCeeEeec---ccCCceEe-ecCeEEEeecCcccC-EEEEEEEecCC
Confidence 456889999999999996 5 888999999875333211 13457877 889999999999999 99999999986
Q ss_pred ---cceEEEeee
Q psy12724 153 ---TGETRLSAT 161 (167)
Q Consensus 153 ---~~~~~l~~~ 161 (167)
+..+.+.+.
T Consensus 325 g~~~~~~~l~V~ 336 (361)
T 2xot_A 325 FNETLSVELKVY 336 (361)
T ss_dssp CEEEEEEEEEEE
T ss_pred CccEEEEEEEEE
Confidence 334455553
No 279
>1wwc_A Protein (NT-3 growth factor receptor TRKC); TRK receptor, receptor tyrosine kinase, 3D-domain swapping, transferase; 1.90A {Homo sapiens} SCOP: b.1.1.4
Probab=99.29 E-value=6.5e-12 Score=86.50 Aligned_cols=61 Identities=13% Similarity=0.133 Sum_probs=47.4
Q ss_pred CcEEEEeeeCCccCCcceeEEEEeCCCeeeEEeeeecCCceEEEc-------cCCeEEEeecCcCCCCcceEEEeeecC
Q psy12724 81 NSAVLKCHIPSFVADYVAVESWISDQGEELFVDMTESTDGKYLVL-------PSGELHIRDVGPEDGYKSYQCRTKHRL 152 (167)
Q Consensus 81 ~~a~l~C~~~~~~~~p~p~i~W~k~~~~~l~~~~~~~~~~r~~~~-------~~g~L~I~~v~~~D~~G~Y~C~a~n~~ 152 (167)
..+.|.|.+.| +|.|.++|+||+ ..+.. +.++.+. .++.|.|.+++.+|+ |.|+|.|.|..
T Consensus 21 ~~~~l~C~~~g---~P~p~i~W~k~g-~~l~~------~~~~~~~~~~~~~~~~~~L~i~~~~~~d~-G~Y~C~a~N~~ 88 (118)
T 1wwc_A 21 LEHCIEFVVRG---NPPPTLHWLHNG-QPLRE------SKIIHVEYYQEGEISEGCLLFNKPTHYNN-GNYTLIAKNPL 88 (118)
T ss_dssp CEEEEEEEEEC---SSCCEEEEEETT-EECCC------SSSEEEEEEECSSEEEEEEEEESCCGGGC-EEEEEEEEETT
T ss_pred cceEEEEEeee---eCCCeEEEEECC-EECCC------CCceeEEEeccCccccEEEEECCCChhcC-EEEEEEEECCC
Confidence 56788999984 599999999997 55532 2222221 356899999999998 99999999987
No 280
>2v5t_A NCAM2, N-CAM 2, neural cell adhesion molecule 2; phosphorylation, immunoglobulin domain, membrane, glycoprote adhesion, transmembrane; HET: NAG; 2.00A {Homo sapiens}
Probab=99.29 E-value=9.9e-12 Score=90.51 Aligned_cols=76 Identities=20% Similarity=0.456 Sum_probs=59.8
Q ss_pred eEEEecCeEEEeCCcEEEEeeeCCccCCcceeEEEEeCCCeeeEEeeeecCCceEEEccCCeEEEeecCcCCCCcceEEE
Q psy12724 68 YTVNIMDEHVLKGNSAVLKCHIPSFVADYVAVESWISDQGEELFVDMTESTDGKYLVLPSGELHIRDVGPEDGYKSYQCR 147 (167)
Q Consensus 68 y~c~~~~~~v~~G~~a~l~C~~~~~~~~p~p~i~W~k~~~~~l~~~~~~~~~~r~~~~~~g~L~I~~v~~~D~~G~Y~C~ 147 (167)
|.-.+.+..+.+|+++.|.|.+.+ .|.|.+.|+|++ ..+.. ....|+.+..++.|.|.+++.+|+ |.|+|.
T Consensus 5 ~~~~~~~~~v~~G~~v~l~C~~~~---~p~~~v~W~~~~-~~~~~----~~~~~~~~~~~~~L~i~~~~~~d~-G~Y~C~ 75 (189)
T 2v5t_A 5 FREVVSPQEFKQGEDAEVVCRVSS---SPAPAVSWLYHN-EEVTT----ISDNRFAMLANNNLQILNINKSDE-GIYRCE 75 (189)
T ss_dssp EEECCSSEEEETTSCEEECCEEEC---SSCCEEEEEC------CB----CCCTTEEECTTSCEEETTCCGGGC-EEEEEE
T ss_pred eeccCCCEEEeCCCcEEEEEEEcC---CCCCEEEEEECC-cccee----ccCCeEEEecCCCEEEeeCCHhHC-cEEEEE
Confidence 444456778999999999999974 488899999997 44432 246788888899999999999999 999999
Q ss_pred eeecC
Q psy12724 148 TKHRL 152 (167)
Q Consensus 148 a~n~~ 152 (167)
+.|..
T Consensus 76 ~~~~~ 80 (189)
T 2v5t_A 76 GRVEA 80 (189)
T ss_dssp EEETT
T ss_pred EEEcC
Confidence 99886
No 281
>3lcy_A Titin; A-BAND, IG tandem domains, ATP-binding, calmodulin-BI cardiomyopathy, disease mutation, disulfide bond, immunoglo domain, isopeptide bond; 2.50A {Homo sapiens}
Probab=99.28 E-value=2e-11 Score=89.25 Aligned_cols=74 Identities=23% Similarity=0.367 Sum_probs=59.8
Q ss_pred eEEEecCeEEEeCCcEEEEeeeCCccCCcceeEEEEeCCCeeeEEeeeecCCceEEEccCC---eEEEeecCcCCCCcce
Q psy12724 68 YTVNIMDEHVLKGNSAVLKCHIPSFVADYVAVESWISDQGEELFVDMTESTDGKYLVLPSG---ELHIRDVGPEDGYKSY 144 (167)
Q Consensus 68 y~c~~~~~~v~~G~~a~l~C~~~~~~~~p~p~i~W~k~~~~~l~~~~~~~~~~r~~~~~~g---~L~I~~v~~~D~~G~Y 144 (167)
+.-.+.+..+.+|+++.|.|.+.+ .|.|.++|+|++ ..+. ...++.+..++ .|.|.+++.+|+ |.|
T Consensus 10 ~~~~~~~~~v~~G~~v~l~C~~~~---~p~~~v~W~~~~-~~~~------~~~~~~~~~~~~~~~L~i~~~~~~d~-G~Y 78 (197)
T 3lcy_A 10 IRKEMKDVTTKLGEAAQLSCQIVG---RPLPDIKWYRFG-KELI------QSRKYKMSSDGRTHTLTVMTEEQEDE-GVY 78 (197)
T ss_dssp EEECCCCEEEETTSEEEEEEEEEE---ESCCEEEEEETT-EEEC------CCSSEEEEESSSEEEEEEECCSGGGC-EEE
T ss_pred ccccCCceEEeCCCcEEEEEEEec---CCCCEEEEEECC-EECC------CCccEEEEeCCCEEEEEEecCCccCC-EEE
Confidence 344456678899999999999974 488899999997 4553 34566666666 799999999999 999
Q ss_pred EEEeeecC
Q psy12724 145 QCRTKHRL 152 (167)
Q Consensus 145 ~C~a~n~~ 152 (167)
+|.|.|..
T Consensus 79 ~C~~~n~~ 86 (197)
T 3lcy_A 79 TCIATNEV 86 (197)
T ss_dssp EEEEECSS
T ss_pred EEEEECCC
Confidence 99999876
No 282
>2j8h_A Titin, connectin; cardiomyopathy, nuclear protein, serine/threonine-protein KI LIMB-girdle muscular dystrophy, phosphorylation; 1.99A {Homo sapiens} PDB: 2j8o_A 2ill_A
Probab=99.28 E-value=2.4e-11 Score=89.26 Aligned_cols=75 Identities=21% Similarity=0.392 Sum_probs=58.7
Q ss_pred eEEEecCeEEEeCCcEEEEeeeCCccCCcceeEEEEeCCCeeeEEeeeecCCceEEEc--cCC--eEEEeecCcCCCCcc
Q psy12724 68 YTVNIMDEHVLKGNSAVLKCHIPSFVADYVAVESWISDQGEELFVDMTESTDGKYLVL--PSG--ELHIRDVGPEDGYKS 143 (167)
Q Consensus 68 y~c~~~~~~v~~G~~a~l~C~~~~~~~~p~p~i~W~k~~~~~l~~~~~~~~~~r~~~~--~~g--~L~I~~v~~~D~~G~ 143 (167)
+.-.+.+..+.+|+++.|.|.+.+ .|.|.++|+|++ ..+.. ...++.+. .+| .|.|.+++.+|+ |.
T Consensus 7 ~~~~~~~~~v~~G~~v~l~C~~~~---~p~~~v~W~~~~-~~~~~-----~~~~~~~~~~~~~~~~L~i~~~~~~d~-G~ 76 (197)
T 2j8h_A 7 FKEELRNLNVRYQSNATLVCKVTG---HPKPIVKWYRQG-KEIIA-----DGLKYRIQEFKGGYHQLIIASVTDDDA-TV 76 (197)
T ss_dssp EEECCCCEEEETTSCEEEEEEEEC---SSCCEEEEEETT-EECCC-----CSSSEEEEEETTTEEEEEECSCCGGGC-SE
T ss_pred EEEcCCccEEcCCCEEEEEEEEee---cCCCEEEEEECC-EECcc-----CCCcEEEEEcCCCEEEEEECcCCHHhC-EE
Confidence 344456678899999999999974 588999999997 45532 23455443 345 899999999999 99
Q ss_pred eEEEeeecC
Q psy12724 144 YQCRTKHRL 152 (167)
Q Consensus 144 Y~C~a~n~~ 152 (167)
|+|.|.|..
T Consensus 77 Y~C~~~n~~ 85 (197)
T 2j8h_A 77 YQVRATNQG 85 (197)
T ss_dssp EEEEEEETT
T ss_pred EEEEEEECC
Confidence 999999976
No 283
>1hzh_H IGG, immunoglobulin heavy chain; antibody, immune system; HET: NAG BMA MAN GAL FUC; 2.70A {Homo sapiens} SCOP: b.1.1.1 b.1.1.2 b.1.1.2 b.1.1.2 PDB: 2ig2_H 1mco_H*
Probab=99.27 E-value=5.4e-12 Score=105.08 Aligned_cols=123 Identities=13% Similarity=0.219 Sum_probs=77.2
Q ss_pred EEeCCcEEEEeecCCCCCCc-ceeeEEeeCCCceee---------ecCCce---EE---------EeeeEEEecCe----
Q psy12724 22 VIKGNAAVFKCNLPSFVSDH-LDVVSWADTDGGQYQ---------IDNQDF---VV---------SQSYTVNIMDE---- 75 (167)
Q Consensus 22 v~~G~~~~l~C~a~~~~~~~-~~~i~W~k~~~~~~~---------~~~~~~---v~---------~g~y~c~~~~~---- 75 (167)
+.+|+++.|.|.+.+.+.++ ...|+|+|++..... .++... .+ .|.|+|.+.+.
T Consensus 261 ~~~G~~v~L~C~~~g~~p~p~~~~i~W~k~~~~~~~~~~~~~~~~~~g~~~~~~~l~i~~~d~~d~G~Y~C~a~n~~~~~ 340 (457)
T 1hzh_H 261 LMISRTPEVTCVVVDVSHEDPEVKFNWYVDGVEVHNAKTKPREEQYNSTYRVVSVLTVLHQDWLNGKEYKCKVSNKALPA 340 (457)
T ss_dssp HCTTSCCCEEEEEECCCTTCCCCEEEEEETTEEECCCEEEEEEECTTSCEEEEEEECCCHHHHHHTCCEEEEEECTTSSS
T ss_pred cccCCceEEEEEEEcccCCCCceEEEEEeCCccccccccccceecCCCcEEEEEEEEECHHHccCCCcEEEEEeCCCCCC
Confidence 56799999999999875431 127999998643210 011111 11 69999988530
Q ss_pred ------------------EE-------EeCCcEEEEeeeCCccCCc-ceeEEEEeCCCeeeEEeeeecCCceEEEccCC-
Q psy12724 76 ------------------HV-------LKGNSAVLKCHIPSFVADY-VAVESWISDQGEELFVDMTESTDGKYLVLPSG- 128 (167)
Q Consensus 76 ------------------~v-------~~G~~a~l~C~~~~~~~~p-~p~i~W~k~~~~~l~~~~~~~~~~r~~~~~~g- 128 (167)
.+ +.|+.+.|.|.+.+. .| .+.++|+||+ ..+.... ..+.....+|
T Consensus 341 ~~~~~v~~~~~~~~~P~v~~~~~~~~~~~~~~~~l~C~~~g~--~p~~~~v~W~k~g-~~l~~~~----~~~~~~~~~g~ 413 (457)
T 1hzh_H 341 PIEKTISKAKGQPREPQVYTLPPSRDELTKNQVSLTCLVKGF--YPSDIAVEWESNG-QPENNYK----TTPPVLDSDGS 413 (457)
T ss_dssp CEEEEECCCCCCCBCCEEEEECCCGGGGGSSEEEEEEEEEEE--BSSCCEEEEEETT-EECCCEE----ECCCEECTTSC
T ss_pred cceEEEEcccCCCCCCeEEEECCCccccCCCcEEEEEEEEeE--ECCCCEEEEEECC-EECccee----ecCceeCCCCC
Confidence 01 124559999999753 13 2389999997 5553211 1112223344
Q ss_pred -----eEEEeecCcCCCCcceEEEeeecC
Q psy12724 129 -----ELHIRDVGPEDGYKSYQCRTKHRL 152 (167)
Q Consensus 129 -----~L~I~~v~~~D~~G~Y~C~a~n~~ 152 (167)
.|.|.....+|+ |.|+|.|.|..
T Consensus 414 ~~~~s~l~i~~~~~~~~-g~YtC~a~n~~ 441 (457)
T 1hzh_H 414 FFLYSKLTVDKSRWQQG-NVFSCSVMHEA 441 (457)
T ss_dssp EEEEEEEEEEHHHHHTT-CCEEEEEECTT
T ss_pred EEEEEEEEEChHHccCC-CeEEEEEEECC
Confidence 466777777898 99999999976
No 284
>1dee_B IGM RF 2A2; FAB-IBP complex 2.7A resolution binding outside the antigen combining site superantigen FAB VH3 specificity; 2.70A {Homo sapiens} SCOP: b.1.1.1 b.1.1.2 PDB: 1hez_B 1adq_H
Probab=99.27 E-value=3.9e-11 Score=91.10 Aligned_cols=131 Identities=14% Similarity=0.245 Sum_probs=85.6
Q ss_pred eEEeEEEEEeCCcEEEEeecCCCCCCcceeeEEeeCC-Cce---eee---c----------CCc------------eE--
Q psy12724 15 AQVYDVFVIKGNAAVFKCNLPSFVSDHLDVVSWADTD-GGQ---YQI---D----------NQD------------FV-- 63 (167)
Q Consensus 15 ~~~~~~~v~~G~~~~l~C~a~~~~~~~~~~i~W~k~~-~~~---~~~---~----------~~~------------~v-- 63 (167)
.++..+.+.+|+++.|.|.+.+.+.. .+.+.|+|.+ +.. +.. + ..| .+
T Consensus 5 ~qp~~~~v~~G~~v~L~C~~~~~~~~-~~~v~W~r~~~g~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~sL~I 83 (223)
T 1dee_B 5 VESGGGVVQPGKSLRLSCAASGFTFS-GYGMHWVRQAPGKGLEWVALISYDESNKYYADSVKGRFTISRDNSKNTLYLQM 83 (223)
T ss_dssp EEECCCEECTTCCEEEEEEEESSCGG-GSCEEEEEECTTSCEEEEEEECTTSCCEEECTTTBTTEEEEEETTTTEEEEEE
T ss_pred EcCCCEEEcCCCcEEEEEEecCcccC-CceEEEEEECCCCCcEEEEEEecCCCccccCcccCCeEEEEecCCCCEEEEEE
Confidence 45678899999999999999876521 2469999854 211 100 0 011 11
Q ss_pred ------EEeeeEEEecCe----------------EE-------------------EeCCcEEEEeeeCCccCCcce-eEE
Q psy12724 64 ------VSQSYTVNIMDE----------------HV-------------------LKGNSAVLKCHIPSFVADYVA-VES 101 (167)
Q Consensus 64 ------~~g~y~c~~~~~----------------~v-------------------~~G~~a~l~C~~~~~~~~p~p-~i~ 101 (167)
.+|.|.|.+.+. .| .+|+.+.|.|.+.+. .|.| .++
T Consensus 84 ~~v~~~D~G~Y~C~~~~~~~~~~~~~~~~~~~~L~V~~~~~~~P~i~~~~~~~~~~~g~~v~L~C~~~g~--~P~p~~v~ 161 (223)
T 1dee_B 84 NSLRAEDTAVYYCAKVKFYDPTAPNDYWGQGTLVTVSSGSASAPTLFPLVSCENSNPSSTVAVGCLAQDF--LPDSITFS 161 (223)
T ss_dssp CSCCGGGCEEEEEEEESSSSTTCCEEEECCCEEEEECSSCCBCCEEEEEECTTCCCSSSEEEEEEEEEEE--BSSCCEEE
T ss_pred CCCCHHHCEEEEEEEeccccCcccceeecCcEEEEEccCCCCCCEEEEecCCcccCCCCcEEEEEEEEEE--eCCCeEEE
Confidence 169999987431 01 257889999999753 2666 899
Q ss_pred EEe-CCCeeeEEe--e-eecCCceEEEccCCeEEEeecCc--CCCCcceEEEeeecC
Q psy12724 102 WIS-DQGEELFVD--M-TESTDGKYLVLPSGELHIRDVGP--EDGYKSYQCRTKHRL 152 (167)
Q Consensus 102 W~k-~~~~~l~~~--~-~~~~~~r~~~~~~g~L~I~~v~~--~D~~G~Y~C~a~n~~ 152 (167)
|+| |+ ..+... . ....+++|.+ ...|.|..... +|. |.|+|.|.|..
T Consensus 162 W~~~~g-~~l~~~~~~~~~~~~~~~~~--~s~L~i~~~~~~~~d~-g~y~C~v~n~~ 214 (223)
T 1dee_B 162 WKYKNN-SDISSTRGFPSVLRGGKYAA--TSQVLLPSKDVAQGTN-EHVVCKVQHPN 214 (223)
T ss_dssp EEETTS-CBCSCEEECCCEEETTEEEE--EEEEEEECTTTTSTTC-CEEEEEEECTT
T ss_pred eEccCC-CccceeEECCccccCCeEEE--EEEEEEcHHHhccCCC-CEEEEEEEeCC
Confidence 999 66 454210 0 0001355554 35699998887 888 99999999987
No 285
>1i1c_A IGG2A, IG gamma-2A chain C region; FC, immune system; HET: NAG FUL BMA MAN FUC; 2.70A {Rattus norvegicus} SCOP: b.1.1.2 b.1.1.2 PDB: 1i1a_D*
Probab=99.27 E-value=1.4e-12 Score=100.99 Aligned_cols=121 Identities=12% Similarity=0.212 Sum_probs=76.8
Q ss_pred EEeCCcEEEEeecCCC---CCCcceeeEEeeCCCceeee--------cCCce-----E--------EEeeeEEEecCe--
Q psy12724 22 VIKGNAAVFKCNLPSF---VSDHLDVVSWADTDGGQYQI--------DNQDF-----V--------VSQSYTVNIMDE-- 75 (167)
Q Consensus 22 v~~G~~~~l~C~a~~~---~~~~~~~i~W~k~~~~~~~~--------~~~~~-----v--------~~g~y~c~~~~~-- 75 (167)
+.+|+++.|.|.+.+. |.+ ..|+|+|+++..... ++.++ + ..|.|.|.+.+.
T Consensus 29 v~~G~~v~L~C~~~g~~~~P~~--~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~s~L~I~~~~~~D~g~Y~C~~~~~~~ 106 (239)
T 1i1c_A 29 LGGGLTPKVTCVVVDISQNDPE--VRFSWFIDDVEVHTAQTHAPEKQSNSTLRSVSELPIVERDWLNGKTFKCKVNSGAF 106 (239)
T ss_dssp TTSSSCCEEEEEEEEECTTCCC--CEEEEEESSCEECCCEECCCEECTTSCEEEEEEEECCHHHHHTTCCEEEEEECSSS
T ss_pred cccCCcEEEEEEEecCccCCCC--CEEEEEECCccccCcccccceEcCCCcEEEEEEEEEEhhHccCCCeEEEEEecccC
Confidence 6799999999999876 432 169999997542210 11111 1 169999987431
Q ss_pred --------------------EE-------EeCCcEEEEeeeCCccCCcc-eeEEEEeCCCeeeEEeeeecCCceEEEccC
Q psy12724 76 --------------------HV-------LKGNSAVLKCHIPSFVADYV-AVESWISDQGEELFVDMTESTDGKYLVLPS 127 (167)
Q Consensus 76 --------------------~v-------~~G~~a~l~C~~~~~~~~p~-p~i~W~k~~~~~l~~~~~~~~~~r~~~~~~ 127 (167)
.+ +.|+.+.|.|.+.+. .|. ..++|+||+ ..+... ...++....+
T Consensus 107 ~~~~~~~v~~~~~~~~~P~v~v~~~~~~~~~g~~~~L~C~~~g~--~P~~~~v~W~k~g-~~l~~~----~~~~~~~~~d 179 (239)
T 1i1c_A 107 PAPIEKSISKPEGTPRGPQVYTMAPPKEEMTQSQVSITCMVKGF--YPPDIYTEWKMNG-QPQENY----KNTPPTMDTD 179 (239)
T ss_dssp SSCEEEEECCCSSCCBCCEEEEECCCGGGGGSSEEEEEEEEEEE--BSSCCEEEEEETT-EECSSE----EECCCEECTT
T ss_pred CCCcEEEEecCCCCCcCCEEEEECCChHHhcCCcEEEEEEEeee--ECCCeEEEEEECC-EECCCc----eecCceECCC
Confidence 01 137889999999763 244 478999997 454211 0112223345
Q ss_pred Ce------EEEeecCcCCCCcceEEEeeecC
Q psy12724 128 GE------LHIRDVGPEDGYKSYQCRTKHRL 152 (167)
Q Consensus 128 g~------L~I~~v~~~D~~G~Y~C~a~n~~ 152 (167)
|. |.|......|. |.|+|.|.|..
T Consensus 180 gt~~~~s~l~v~~~~~~~~-g~YtC~v~n~~ 209 (239)
T 1i1c_A 180 GSYFLYSKLNVKKETWQQG-NTFTCSVLHEG 209 (239)
T ss_dssp SCEEEEEEEEEEHHHHHTT-CCEEEEEECTT
T ss_pred CCEEEEEEEEEChhhcCCC-CEEEEEEECCC
Confidence 54 44555555678 99999999987
No 286
>3zyj_A Leucine-rich repeat-containing protein 4C; cell adhesion, synapse; HET: NAG BMA MAN; 3.25A {Homo sapiens}
Probab=99.27 E-value=1.1e-11 Score=103.38 Aligned_cols=88 Identities=25% Similarity=0.419 Sum_probs=66.1
Q ss_pred EeeeEEEe-------cCeEEEeCCcEEEEeeeCCccCCcceeEEEEeCCCeeeEEeeeecCCceEEEccCCeEEEeecCc
Q psy12724 65 SQSYTVNI-------MDEHVLKGNSAVLKCHIPSFVADYVAVESWISDQGEELFVDMTESTDGKYLVLPSGELHIRDVGP 137 (167)
Q Consensus 65 ~g~y~c~~-------~~~~v~~G~~a~l~C~~~~~~~~p~p~i~W~k~~~~~l~~~~~~~~~~r~~~~~~g~L~I~~v~~ 137 (167)
...|.|.+ .+..+.+|++++|.|.+. .|.|.++|+++++..+... ...+|+.+..+|.|.|++++.
T Consensus 334 ~~~~~C~~P~i~~~~~~~~v~~G~~v~L~C~~~----~p~p~i~W~~~~~~~~~~~---~~~~~~~~~~~~~L~I~~v~~ 406 (440)
T 3zyj_A 334 QNYFTCYAPVIVEPPADLNVTEGMAAELKCRAS----TSLTSVSWITPNGTVMTHG---AYKVRIAVLSDGTLNFTNVTV 406 (440)
T ss_dssp -CCSCCCCCCEEECCCCEEECTTSCCEECCEES----STTSEEEEECTTSCEEESS---SCCSSEEECTTCCEEESSCCS
T ss_pred hhhccCCCCcccccccceeeccCceEEEEeecC----CCCCceEEEeCCCceeecc---CCCceEEEccCCeEEEccCCh
Confidence 45566643 346788999999999993 3888999999765443211 134688888999999999999
Q ss_pred CCCCcceEEEeeecC---cceEEEee
Q psy12724 138 EDGYKSYQCRTKHRL---TGETRLSA 160 (167)
Q Consensus 138 ~D~~G~Y~C~a~n~~---~~~~~l~~ 160 (167)
+|+ |.|+|.|.|.. +..+.+.+
T Consensus 407 ~D~-G~Y~C~a~N~~G~~~~~~~~~v 431 (440)
T 3zyj_A 407 QDT-GMYTCMVSNSVGNTTASATLNV 431 (440)
T ss_dssp TTC-EEEEEEEECSSCEEEEEEEEEE
T ss_pred hhC-EEEEEEEEcCCCcEEEEEEEEE
Confidence 999 99999999987 33444444
No 287
>2aty_A Complement receptor chimeric conjugate CR2-IG; immunoglobulin fold, antibody, immune system; NMR {Homo sapiens}
Probab=99.27 E-value=1e-11 Score=102.01 Aligned_cols=126 Identities=15% Similarity=0.203 Sum_probs=80.5
Q ss_pred EEeCCcEEEEeecCCC-CCCcceeeEEeeCCCceeee--------cCCc-----eE--------EEeeeEEEecCe----
Q psy12724 22 VIKGNAAVFKCNLPSF-VSDHLDVVSWADTDGGQYQI--------DNQD-----FV--------VSQSYTVNIMDE---- 75 (167)
Q Consensus 22 v~~G~~~~l~C~a~~~-~~~~~~~i~W~k~~~~~~~~--------~~~~-----~v--------~~g~y~c~~~~~---- 75 (167)
+..|+++.|.|.+.+. |.+....|+|+|++++.... .+.. .+ ..|.|.|.+.+.
T Consensus 180 ~~~g~~v~L~C~~~g~~P~p~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~s~L~I~~~~~~D~g~Y~C~~~~~~~~~ 259 (376)
T 2aty_A 180 LTITLTPKVTCVVVDISKDDPEVQFSWFVDDVEVHTAQTQPREEQFNSTFRSVSELPIMHQDWLNGKEFKCRVNSAAFPA 259 (376)
T ss_pred eeeCCeeEEEEEEeccccCCCccEEEEEECCccccCcccCCCCcccCCcEEEEEEEEechHhccCCCEEEEEEecCCCCC
Confidence 7899999999999987 22212369999997543211 0111 11 258899987321
Q ss_pred ------------------E-------EEeCCcEEEEeeeCCccCCcceeEEEEeCCCeeeEEee----eecCCceEEEcc
Q psy12724 76 ------------------H-------VLKGNSAVLKCHIPSFVADYVAVESWISDQGEELFVDM----TESTDGKYLVLP 126 (167)
Q Consensus 76 ------------------~-------v~~G~~a~l~C~~~~~~~~p~p~i~W~k~~~~~l~~~~----~~~~~~r~~~~~ 126 (167)
. +..|+.+.|.|.+.++ -.|.+.|+|+||+ ..+.... ....++.|.+.
T Consensus 260 ~~~~~v~~~~~~~~~P~v~v~~~~~~~~~g~~~~L~C~~~g~-~P~~i~v~W~k~g-~~~~~~~~~~~~~~~dgty~~~- 336 (376)
T 2aty_A 260 PIEKTISKTKGRPKAPQLYTIPPPKEQMAKDKVSLTCMITDF-FPEDITVEWQWNG-QPAENYKNTQPIMNTNESYFVY- 336 (376)
T ss_pred ceEEEEcCCCCCCcCCeEEeeCCCHHHhcCCceEEEEEEEEe-ECCCcEEEEEECC-EECCCeEeCCceECCCCCEEEE-
Confidence 0 1248899999999864 1134688999997 4442110 00122233322
Q ss_pred CCeEEEeecCcCCCCcceEEEeeecC
Q psy12724 127 SGELHIRDVGPEDGYKSYQCRTKHRL 152 (167)
Q Consensus 127 ~g~L~I~~v~~~D~~G~Y~C~a~n~~ 152 (167)
..|.|.....+|. |.|+|.|.|..
T Consensus 337 -s~L~i~~~~~~~~-~~YtC~v~h~~ 360 (376)
T 2aty_A 337 -SKLNVQKSNWEAG-NTFTCSVLHEG 360 (376)
T ss_pred -EEEEEcHHHhCCC-CcEEEEEEeCC
Confidence 2488888888888 99999999986
No 288
>1h5b_A Murine T cell receptor (TCR) valpha domain; immune response, immunoglobulin fold; 1.85A {Mus musculus} SCOP: b.1.1.1 PDB: 1h5b_C 1h5b_B
Probab=99.26 E-value=1.9e-11 Score=83.82 Aligned_cols=86 Identities=20% Similarity=0.378 Sum_probs=58.1
Q ss_pred ecCeEEEeCCcEEEEeeeCCccCCcceeEEEEeCCC-eee--EEeee--ecCCceEEEccCC------eEEEeecCcCCC
Q psy12724 72 IMDEHVLKGNSAVLKCHIPSFVADYVAVESWISDQG-EEL--FVDMT--ESTDGKYLVLPSG------ELHIRDVGPEDG 140 (167)
Q Consensus 72 ~~~~~v~~G~~a~l~C~~~~~~~~p~p~i~W~k~~~-~~l--~~~~~--~~~~~r~~~~~~g------~L~I~~v~~~D~ 140 (167)
+.+..+.+|++|+|+|.+.+. + +.+.|+|+.. ..+ .-... +...+|+.+..++ .|.|++++.+|+
T Consensus 8 p~~~~v~~G~~v~L~C~~~~~---~-~~v~W~r~~~~~~~~~l~~~~~~~~~~~r~~~~~~~~~~~~~~L~I~~v~~~Ds 83 (113)
T 1h5b_A 8 PSALSLHEGTDSALRCNFTTT---M-RSVQWFRQNSRGSLISLFYLASGTKENGRLKSAFDSERARYSTLHIRDAQLEDS 83 (113)
T ss_dssp CSEEEEETTCCEEEEEEESSC---C-SEEEEEEECTTSCEEEEEEESSSEEEETTEEEECCSSSSSEEEEEECSCCGGGC
T ss_pred CCEEEEecCCcEEEEEEECCC---C-ceEEEEEECCCCCeEEEEEECCCCccCCceEEEEccCCCCEEEEEECCCChhhC
Confidence 345678899999999999742 3 5799998641 111 10000 0124677765544 799999999999
Q ss_pred CcceEEEeeecC-------cceEEEeeeC
Q psy12724 141 YKSYQCRTKHRL-------TGETRLSATK 162 (167)
Q Consensus 141 ~G~Y~C~a~n~~-------~~~~~l~~~~ 162 (167)
|.|.|.+.|.. ..-++|.+.+
T Consensus 84 -G~Y~C~~~n~~~~~~~~fg~gT~L~V~~ 111 (113)
T 1h5b_A 84 -GTYFCAAEASSGSWQLIFGSGTQLTVMP 111 (113)
T ss_dssp -EEEEEEEECSSSSSSCEECCCEEEEEEC
T ss_pred -EEEEEEEecCCCCcEEEECCCcEEEEEE
Confidence 99999999864 2345555544
No 289
>3bae_H WO2 IGG2A FAB fragment heavy chain; abeta, FAB, WO2, alzheimer'S disease, immunotherapies, APP, immune system; 1.59A {Mus musculus} SCOP: b.1.1.2 PDB: 3bkc_H 3bkj_H 3bkm_H 3mck_H 2r0w_H* 2iqa_H 2iq9_H 1ggi_H 1ggb_H 1ggc_H 3eys_H* 2ipt_H 2ipu_H 3eyu_H* 2r0z_H* 3rkd_H 1r0a_H* 1n5y_H* 1n6q_H* 1t03_H* ...
Probab=99.26 E-value=3e-11 Score=91.86 Aligned_cols=132 Identities=15% Similarity=0.195 Sum_probs=83.3
Q ss_pred eEEeEEEEEeCCcEEEEeecCCCCCCc-ceeeEEeeCC-Cce---e-eec-----------CCc------------eE--
Q psy12724 15 AQVYDVFVIKGNAAVFKCNLPSFVSDH-LDVVSWADTD-GGQ---Y-QID-----------NQD------------FV-- 63 (167)
Q Consensus 15 ~~~~~~~v~~G~~~~l~C~a~~~~~~~-~~~i~W~k~~-~~~---~-~~~-----------~~~------------~v-- 63 (167)
.+|+++.+.+|+++.|.|.+.+.+... .+.+.|+|++ +.. + ..+ ..| .+
T Consensus 5 ~qp~~~~v~~G~~v~L~C~~~~~~~~~~~~~v~W~r~~~g~~~~~l~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~~L~I 84 (228)
T 3bae_H 5 KESGPGLLKPSQTLSLTCSFSGFSIRTSKVGVSWIRQPSGKGLEWLAHIYWDDDKRYNPSLESRLTISKDTSRDMVFMKI 84 (228)
T ss_dssp EEECCSEECTTCCEEEEEEEESSCHHHHCCEEEEEEEETTCCCEEEEEECTTSCEEECTTTGGGEEEEEETTTTEEEEEE
T ss_pred eCCCceeecCCCeEEEEEEEeCcccCCCceeEEEEEECCCCCeEEEEEEecCCceeeCcccCCcEEEEEcCCCCeEEEEE
Confidence 457788999999999999998765310 1479998853 211 1 000 001 11
Q ss_pred ------EEeeeEEEecCe--------------------------------------EEEeCCcEEEEeeeCCccCCcce-
Q psy12724 64 ------VSQSYTVNIMDE--------------------------------------HVLKGNSAVLKCHIPSFVADYVA- 98 (167)
Q Consensus 64 ------~~g~y~c~~~~~--------------------------------------~v~~G~~a~l~C~~~~~~~~p~p- 98 (167)
.+|.|.|.+.+. .+.+|+++.|.|.+.+. .|.|
T Consensus 85 ~~v~~~D~G~Y~C~~~~~~g~~~~~~~~~~~~~~~~L~V~~~~~~~P~i~~~~~~~~~~~g~~~~l~C~~~g~--~P~p~ 162 (228)
T 3bae_H 85 TSVDTADTATYYCARRGFYGRKYEVNHFDYWGQGTTLTVSSAKTTAPSVYPLAPVCGDTTGSSVTLGCLVKGY--FPEPV 162 (228)
T ss_dssp CSCCGGGCEEEEEEEEEESTTCTTSEEEEEECCCEEEEECSCCCBCCEEEEECC-----CCSEEEEEEEEEEE--BSSCC
T ss_pred cCCCcccCEEEEEEEecCCCccccccceeeeCCcEEEEecCCCCCCCEEEEecccccccCCCCEEEEEEEccE--eCCCE
Confidence 168999976321 01358899999999753 3667
Q ss_pred eEEEEeCCCeeeE-Eeee-ecCCceEEEccCCeEEEeecCcCCCCcceEEEeeecCc
Q psy12724 99 VESWISDQGEELF-VDMT-ESTDGKYLVLPSGELHIRDVGPEDGYKSYQCRTKHRLT 153 (167)
Q Consensus 99 ~i~W~k~~~~~l~-~~~~-~~~~~r~~~~~~g~L~I~~v~~~D~~G~Y~C~a~n~~~ 153 (167)
.++|+|++. .+. .... ....+.|.+ .+.|.|.++.. |. |.|+|.|.|...
T Consensus 163 ~v~W~~~~~-~~~~~~~~~~~~~~~~~~--~s~L~i~~~~~-d~-g~YtC~~~n~~~ 214 (228)
T 3bae_H 163 TLTWNSGSL-SSGVHTFPAVLQSDLYTL--SSSVTVTSSTW-PS-ESITCNVAHPAS 214 (228)
T ss_dssp EEEEGGGTC-CTTEEEEEEEEETTEEEE--EEEEEEETTTT-TT-SCCEEEEEEGGG
T ss_pred EEEEeeCCc-ccCceEcCceeCCCcEEE--EEEEEEEhhhc-CC-CcEEEEEEECCC
Confidence 899999873 321 0000 001134433 35699999888 76 999999999873
No 290
>4fa8_A Secreted protein BARF1; immunoglobulin-like domains, 4-helix bundle fold, viral PROT cytokine complex; HET: NAG BMA; 2.20A {Human herpesvirus 4} PDB: 2ch8_A* 3uez_A* 4adf_A* 4adq_A*
Probab=99.25 E-value=1.3e-11 Score=93.47 Aligned_cols=85 Identities=15% Similarity=0.067 Sum_probs=56.7
Q ss_pred CeEEEeCCcEEEEeeeCCccCCcceeEEEEeCCCeeeEEee----------e-ecCCceEEEcc---CCeEEEeecCcCC
Q psy12724 74 DEHVLKGNSAVLKCHIPSFVADYVAVESWISDQGEELFVDM----------T-ESTDGKYLVLP---SGELHIRDVGPED 139 (167)
Q Consensus 74 ~~~v~~G~~a~l~C~~~~~~~~p~p~i~W~k~~~~~l~~~~----------~-~~~~~r~~~~~---~g~L~I~~v~~~D 139 (167)
+.++.+|++|+|+|......+.|.|.|+|+|++. .+.... . ....+++.+.. +..|.|.+++.+|
T Consensus 2 ~Vta~~Ge~v~L~C~~~~v~~~p~~~V~W~k~g~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~I~~v~~~D 80 (203)
T 4fa8_A 2 AVTAFLGERVTLTSYWRRVSLGPEIEVSWFKLGP-GEEQVLIGRMHHDVIFIEWPFRGFFDIHRSANTFFLVVTAANISH 80 (203)
T ss_dssp CCEEETTCCEEEEEECSSTTCSTTSEEEEEEEET-TTEEEEEEEEETTEEEECGGGBTTEEEEEETTEEEEEESSCCGGG
T ss_pred CeEEEcCCCEEEEeeeeccCCCCCcEEEEEEcCC-CcceEEEEecCCceEEeeccccceEEEEEcCCEEEEEEccCCHHH
Confidence 4678999999999975433366999999999862 211100 0 00122333322 2369999999999
Q ss_pred CCcceEEEeeecC---cceEEEee
Q psy12724 140 GYKSYQCRTKHRL---TGETRLSA 160 (167)
Q Consensus 140 ~~G~Y~C~a~n~~---~~~~~l~~ 160 (167)
+ |.|+|.|.|.. +..+.|.+
T Consensus 81 ~-G~Y~C~a~n~~g~~~~~~~l~V 103 (203)
T 4fa8_A 81 D-GNYLCRMKLGETEVTKQEHLSV 103 (203)
T ss_dssp C-EEEEEEEEETTEEEEEEEEEEE
T ss_pred C-eEEEEEEEcCCCcEEEEEEEEe
Confidence 9 99999999976 33444544
No 291
>1igy_B IGG1 intact antibody MAB61.1.3; intact immunoglobulin, V region, C region, hinge region, immunoglobulin; HET: NAG FUL NDG BMA MAN GAL FUC; 3.20A {Mus musculus} SCOP: b.1.1.1 b.1.1.2 b.1.1.2 b.1.1.2
Probab=99.25 E-value=1.1e-12 Score=108.54 Aligned_cols=125 Identities=17% Similarity=0.268 Sum_probs=79.9
Q ss_pred EEeCCcEEEEeecCCCCC-CcceeeEEeeCCCceeee---------cCC----ceE--------EEeeeEEEecCe----
Q psy12724 22 VIKGNAAVFKCNLPSFVS-DHLDVVSWADTDGGQYQI---------DNQ----DFV--------VSQSYTVNIMDE---- 75 (167)
Q Consensus 22 v~~G~~~~l~C~a~~~~~-~~~~~i~W~k~~~~~~~~---------~~~----~~v--------~~g~y~c~~~~~---- 75 (167)
+.+|+++.|.|.+.+.++ +..+.|+|+|++...... ++. ..+ ..|.|+|.+.+.
T Consensus 242 v~~G~~~~L~C~~~g~~p~P~~~~i~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~n~~~~~ 321 (434)
T 1igy_B 242 LLITVTPKVTCVVVDISKDDPEVQFSWFVDNVEVHTAQTQPREEQFNSTFRVVSALPIMHQDWLNGKEFKCRVNSAAFPA 321 (434)
T ss_dssp HSTTSCCEEEEEECCCCSSCCCCCBCBBSSSCCBCCCSCCCCCCCCSSSCCCCCCEECCHHHHHHTCCCBCCBCCSSCSS
T ss_pred cccCCCcEEEEEEeccccCCCCeEEEEEeCCcccCCcccCcceeCCCCcEEEEEEEEECHHHccCCCcEEEEEECCCCCC
Confidence 788999999999998742 112479999987543211 110 011 269999987430
Q ss_pred ------------------E-------EEeCCcEEEEeeeCCccCCc-ceeEEEEeCCCeeeEEeee----ecCCceEEEc
Q psy12724 76 ------------------H-------VLKGNSAVLKCHIPSFVADY-VAVESWISDQGEELFVDMT----ESTDGKYLVL 125 (167)
Q Consensus 76 ------------------~-------v~~G~~a~l~C~~~~~~~~p-~p~i~W~k~~~~~l~~~~~----~~~~~r~~~~ 125 (167)
. ...|+.+.|.|.+.+. .| .+.++|+||+ ..+..... ...++.|.+.
T Consensus 322 ~~~~~v~~~~~~~~~P~v~~~~~~~~~~~~~~~~L~C~~~g~--~P~~~~v~W~k~g-~~l~~~~~~~~~~~~~g~~~~~ 398 (434)
T 1igy_B 322 PIEKTISKTKGKPRAPQVYTIPPPKEQMAKDKVSLTCMITDF--FPEDITVEWQSDG-QAPENYKNTQPIMDTDGSYFVY 398 (434)
T ss_dssp CCCCCCCCCCSCCBCCCCEEECCCSSSSSSSEEEEEEEEEEE--BCSCEEEEEEETT-SCCSCCEECCCCCCSSSCEEEE
T ss_pred ceeEEEeccCCCCcCCEEEEECCCHHHhcCCcEEEEEEEEee--ECCCeEEEEEECC-EecCCceeccceeCCCCcEEEE
Confidence 1 1257789999999753 24 3489999997 45421100 0112222221
Q ss_pred cCCeEEEeecCcCCCCcceEEEeeecC
Q psy12724 126 PSGELHIRDVGPEDGYKSYQCRTKHRL 152 (167)
Q Consensus 126 ~~g~L~I~~v~~~D~~G~Y~C~a~n~~ 152 (167)
..|.|.....+|+ |.|+|.|.|..
T Consensus 399 --s~l~i~~~~~~~~-g~YtC~a~n~~ 422 (434)
T 1igy_B 399 --SKLNVQKSNWEAG-NTFTCSVLHEG 422 (434)
T ss_dssp --EEEEEEHHHHHTT-CCEEEEEEETT
T ss_pred --EEEEECchhccCC-CEEEEEEEcCC
Confidence 2477888888898 99999999986
No 292
>2cry_A KIN of IRRE-like protein 3; IG fold, KIN of irregular chiasm-like protein 3, nephrin- like 2, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.1.1.1
Probab=99.25 E-value=1.1e-12 Score=90.95 Aligned_cols=72 Identities=25% Similarity=0.448 Sum_probs=56.1
Q ss_pred ecCeEEEeCCcEEEEeeeCCccCCccee-EEEEeCCCeeeEEeeeecCCceEEEc----cC---CeEEEeecCcCCCC-c
Q psy12724 72 IMDEHVLKGNSAVLKCHIPSFVADYVAV-ESWISDQGEELFVDMTESTDGKYLVL----PS---GELHIRDVGPEDGY-K 142 (167)
Q Consensus 72 ~~~~~v~~G~~a~l~C~~~~~~~~p~p~-i~W~k~~~~~l~~~~~~~~~~r~~~~----~~---g~L~I~~v~~~D~~-G 142 (167)
..+..+.+|+++.|.|.+.+ .|.|. ++|+|++ ..+... ..+||.+. .+ ..|.|.+++.+| . |
T Consensus 20 ~~~~~~~~G~~v~l~C~~~g---~P~p~~i~W~~~~-~~l~~~----~~~~~~~~~~~~~~~~~~~L~I~~v~~~D-~~G 90 (122)
T 2cry_A 20 TQTQHALHGEKGQIKCFIRS---TPPPDRIAWSWKE-NVLESG----TSGRYTVETISTEEGVISTLTISNIVRAD-FQT 90 (122)
T ss_dssp ECCCCCCTTSCCCCCEEECC---SSCCSEEEEESSS-CEECSE----EETTEEEEEEEETTEEEEEEECTTCCHHH-HHS
T ss_pred CCeEEEecCCCEEEEEEEee---cCCCcEeEEEECC-EEccCC----CCCCEEEEEecCCCceEEEEEEcCCChhh-CCc
Confidence 45667889999999999984 58887 9999997 455321 13566552 22 279999999999 5 9
Q ss_pred ceEEEeeecC
Q psy12724 143 SYQCRTKHRL 152 (167)
Q Consensus 143 ~Y~C~a~n~~ 152 (167)
.|+|.|.|.+
T Consensus 91 ~Y~C~a~N~~ 100 (122)
T 2cry_A 91 IYNCTAWNSF 100 (122)
T ss_dssp CEEEEEECSS
T ss_pred eEEEEEECCC
Confidence 9999999998
No 293
>1jhl_L IGG1-kappa D11.15 FV (light chain); complex(antibody-antigen); 2.40A {Mus musculus} SCOP: b.1.1.1
Probab=99.25 E-value=3.4e-11 Score=81.81 Aligned_cols=76 Identities=16% Similarity=0.294 Sum_probs=54.0
Q ss_pred cCeEEEeCCcEEEEeeeCCccCCcceeEEEEeCCC-ee---eEEe---eeecCCceEEEccC---CeEEEeecCcCCCCc
Q psy12724 73 MDEHVLKGNSAVLKCHIPSFVADYVAVESWISDQG-EE---LFVD---MTESTDGKYLVLPS---GELHIRDVGPEDGYK 142 (167)
Q Consensus 73 ~~~~v~~G~~a~l~C~~~~~~~~p~p~i~W~k~~~-~~---l~~~---~~~~~~~r~~~~~~---g~L~I~~v~~~D~~G 142 (167)
.+..+.+|++|.|+|.+.+ .|.|.+.|+|++. .. +... ..+...+|+.+..+ ..|.|++++.+|+ |
T Consensus 9 ~~~~~~~G~~v~L~C~~~~---~~~~~v~W~r~~~~~~~~~l~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~Ds-G 84 (108)
T 1jhl_L 9 SYLVASPGETITINCRASK---SISKSLAWYQEKPGKTNNLLIYSGSTLQSGIPSRFSGSGSGTDFTLTISSLEPEDF-A 84 (108)
T ss_dssp SEEEECTTSCEEEEEEESS---CCTTCEEEEEECTTSCCEEEEETTTEECTTCCTTEEEEESSSEEEEEECSCCTTCC-S
T ss_pred CeeEEcCCCCEEEEeEECC---CCCceEEEEEECCCCCCEEEEEcCCCcCCCCCceEEEEecCCEEEEEECCCCHHHC-E
Confidence 4567889999999999984 4678899998641 11 1110 00012357766532 3799999999999 9
Q ss_pred ceEEEeeecC
Q psy12724 143 SYQCRTKHRL 152 (167)
Q Consensus 143 ~Y~C~a~n~~ 152 (167)
.|.|.|.|..
T Consensus 85 ~Y~C~~~n~~ 94 (108)
T 1jhl_L 85 MYICQQHNEY 94 (108)
T ss_dssp EEEEEECSSS
T ss_pred EEEEEEccCC
Confidence 9999999974
No 294
>1igt_B IGG2A intact antibody - MAB231; intact immunoglobulin V region C region, immunoglobulin; HET: NAG FUL BMA MAN GAL FUC; 2.80A {Mus musculus} SCOP: b.1.1.1 b.1.1.2 b.1.1.2 b.1.1.2
Probab=99.24 E-value=3.5e-12 Score=105.67 Aligned_cols=121 Identities=12% Similarity=0.256 Sum_probs=77.6
Q ss_pred EEeCCcEEEEeecCCCC--CCcceeeEEeeCCCceeee----------cCC-c---eE--------EEeeeEEEecCe--
Q psy12724 22 VIKGNAAVFKCNLPSFV--SDHLDVVSWADTDGGQYQI----------DNQ-D---FV--------VSQSYTVNIMDE-- 75 (167)
Q Consensus 22 v~~G~~~~l~C~a~~~~--~~~~~~i~W~k~~~~~~~~----------~~~-~---~v--------~~g~y~c~~~~~-- 75 (167)
+.+|+++.|.|.+.+.+ .+ .+.|+|+|++.. +.. ++. . .+ ..|.|+|.+.+.
T Consensus 252 ~~~G~~~~L~C~~~g~~~~p~-~~~v~W~k~~~~-~~~~~~~~~~~~~~~~~~~~~~L~I~~v~~~d~G~Y~C~a~n~~~ 329 (444)
T 1igt_B 252 LMISLSPIVTCVVVDVSEDDP-DVQISWFVNNVE-VHTAQTQTHREDYNSTLRVVSALPIQHQDWMSGKEFKCKVNNKDL 329 (444)
T ss_dssp HCTTSCCEEEEEEEEECTTCC-CCEEEEEETTEE-CSSTTCBCCEEECSSSEEEEEEEECCHHHHHTTCEEEEEEECTTC
T ss_pred eecCCCcEEEEEEeecccCCC-CeEEEEEECCcc-ccCcccccceeCCCCcEEEEEEEEEcHHHhccCCcEEEEEEcCCC
Confidence 47899999999999874 21 247999998642 221 110 0 11 169999987431
Q ss_pred ------E--------------E-------EeCCcEEEEeeeCCccCCcce-eEEEEeCCCeeeEEeeeecCCceEEEccC
Q psy12724 76 ------H--------------V-------LKGNSAVLKCHIPSFVADYVA-VESWISDQGEELFVDMTESTDGKYLVLPS 127 (167)
Q Consensus 76 ------~--------------v-------~~G~~a~l~C~~~~~~~~p~p-~i~W~k~~~~~l~~~~~~~~~~r~~~~~~ 127 (167)
. + +.++.+.|.|.+.+. .|.| .++|+||+ ..+.... ..+.....+
T Consensus 330 ~~~~~~~v~~~~~~~~~P~v~~~~~~~~~~~~~~~~L~C~~~g~--~P~~~~v~W~k~g-~~l~~~~----~~~~~~~~~ 402 (444)
T 1igt_B 330 PAPIERTISKPKGSVRAPQVYVLPPPEEEMTKKQVTLTCMVTDF--MPEDIYVEWTNNG-KTELNYK----NTEPVLDSD 402 (444)
T ss_dssp SSCEEEEEECCCCCCBCCEEEEECCCGGGTTSSEEEEEEEEEEE--BSSCCEEEEEETT-EECSSEE----ECCCEECTT
T ss_pred CCceEEEEeccCCCCCCCEEEEeCCChHHccCCeEEEEEEEEee--eCCCCEEEEEECC-EEccccc----cccceeCCC
Confidence 0 1 134469999999753 3555 89999997 4542110 111222334
Q ss_pred C------eEEEeecCcCCCCcceEEEeeecC
Q psy12724 128 G------ELHIRDVGPEDGYKSYQCRTKHRL 152 (167)
Q Consensus 128 g------~L~I~~v~~~D~~G~Y~C~a~n~~ 152 (167)
| .|.|.....+|+ |.|+|.|.|..
T Consensus 403 g~~~~~s~l~i~~~~~~d~-g~YtC~a~n~~ 432 (444)
T 1igt_B 403 GSYFMYSKLRVEKKNWVER-NSYSCSVVHEG 432 (444)
T ss_dssp SCEEEEEEEEEEHHHHHTC-CCEEEEEECTT
T ss_pred CCEEEEEEEEEChHHhcCC-CeEEEEEECCC
Confidence 4 466777777888 99999999986
No 295
>1vca_A VCAM-D1,2, human vascular cell adhesion molecule-1; immunoglobulin superfamily, integrin-binding, cell adhesion protein; 1.80A {Homo sapiens} SCOP: b.1.1.3 b.1.1.4 PDB: 1ij9_A 1vsc_A
Probab=99.24 E-value=4e-11 Score=90.10 Aligned_cols=79 Identities=18% Similarity=0.244 Sum_probs=55.9
Q ss_pred EEecCeEEE-eCCcEEEEeeeCCccCCcceeEEEEeCCCeeeEEeeeecCCceEEEc-cCCeEEEeecCcCCCCcceEEE
Q psy12724 70 VNIMDEHVL-KGNSAVLKCHIPSFVADYVAVESWISDQGEELFVDMTESTDGKYLVL-PSGELHIRDVGPEDGYKSYQCR 147 (167)
Q Consensus 70 c~~~~~~v~-~G~~a~l~C~~~~~~~~p~p~i~W~k~~~~~l~~~~~~~~~~r~~~~-~~g~L~I~~v~~~D~~G~Y~C~ 147 (167)
..+.+..+. +|+++.|.|.+.| .|.|.++|+|+.+..+ .++.... .++.|.|.+++.+|+ |.|+|.
T Consensus 5 i~p~~~~~~~~G~~v~L~C~~~g---~P~p~i~W~~~~~~~~--------~~~~~~~~~~~~L~I~~v~~~D~-G~Y~C~ 72 (202)
T 1vca_A 5 TTPESRYLAQIGDSVSLTCSTTG---CESPFFSWRTQIDSPL--------NGKVTNEGTTSTLTMNPVSFGNE-HSYLCT 72 (202)
T ss_dssp EESSSEEEEETTSCEEEEEEEES---CSSCEEEEEETTCCCC--------SSEEEEETTEEEEEESSCCGGGC-SEEEEE
T ss_pred ECCCCcEEEcCCCcEEEEEeecC---CCCCeEEEECCCCCCc--------cceEEEcCCccEEEECcCCHHHC-EEEEEE
Confidence 344555555 8999999999974 5889999999542222 1222222 345799999999999 999999
Q ss_pred eeecC---cceEEEee
Q psy12724 148 TKHRL---TGETRLSA 160 (167)
Q Consensus 148 a~n~~---~~~~~l~~ 160 (167)
|.|.. +..+.|.+
T Consensus 73 a~n~~~~~~~~~~l~V 88 (202)
T 1vca_A 73 ATCESRKLEKGIQVEI 88 (202)
T ss_dssp EEETTEEEEEEEEEEE
T ss_pred EEECCceEeeEEEEEE
Confidence 99986 33445554
No 296
>3zyi_A Leucine-rich repeat-containing protein 4; cell adhesion, LRRC4 complex, synapse; HET: NAG; 2.60A {Homo sapiens} PDB: 3zyo_A* 3zyn_A* 2dl9_A
Probab=99.24 E-value=4.4e-12 Score=106.15 Aligned_cols=87 Identities=24% Similarity=0.378 Sum_probs=66.2
Q ss_pred EeeeEEEe-------cCeEEEeCCcEEEEeeeCCccCCcceeEEEEeCCCeeeEEeeeecCCceEEEccCCeEEEeecCc
Q psy12724 65 SQSYTVNI-------MDEHVLKGNSAVLKCHIPSFVADYVAVESWISDQGEELFVDMTESTDGKYLVLPSGELHIRDVGP 137 (167)
Q Consensus 65 ~g~y~c~~-------~~~~v~~G~~a~l~C~~~~~~~~p~p~i~W~k~~~~~l~~~~~~~~~~r~~~~~~g~L~I~~v~~ 137 (167)
.+.|.|.+ .+..+.+|++++|.|.+. |.|.++|+++++..+... ...+|+.+..+|.|.|++++.
T Consensus 345 ~~~~~C~~P~i~~~~~~~~v~~G~~~~l~C~~~-----p~p~i~W~~~~~~~~~~~---~~~~~~~~~~~g~L~i~~v~~ 416 (452)
T 3zyi_A 345 QASFQCSAPFIMDAPRDLNISEGRMAELKCRTP-----PMSSVKWLLPNGTVLSHA---SRHPRISVLNDGTLNFSHVLL 416 (452)
T ss_dssp GGGCCCCCCCCSBCCCCEECCTTSCCEECCBCC-----TTSEEEEECTTSCEECSS---CCCSSCEECTTSCEECSSCCT
T ss_pred hhhhcccCcccccccccccccCCCEEEEEEeCC-----CCCcEEEEeCCCcEeccC---CCCCCEEECCCCeEEEeecCH
Confidence 45677753 346788999999999985 888999999765443211 134578888899999999999
Q ss_pred CCCCcceEEEeeecC---cceEEEee
Q psy12724 138 EDGYKSYQCRTKHRL---TGETRLSA 160 (167)
Q Consensus 138 ~D~~G~Y~C~a~n~~---~~~~~l~~ 160 (167)
+|+ |.|+|.|.|.. +..+.|.+
T Consensus 417 ~D~-G~Y~C~a~N~~G~~~~~~~l~v 441 (452)
T 3zyi_A 417 SDT-GVYTCMVTNVAGNSNASAYLNV 441 (452)
T ss_dssp TCC-EEEEEEEECSSCEEEEEEEEEC
T ss_pred HHC-EEEEEEEEcCCCcEEEEEEEEE
Confidence 999 99999999987 33444544
No 297
>1hnf_A CD2; T lymphocyte adhesion glycoprotein; HET: NAG; 2.50A {Homo sapiens} SCOP: b.1.1.1 b.1.1.3 PDB: 1cdb_A 1gya_A* 1qa9_A
Probab=99.24 E-value=3.5e-11 Score=89.72 Aligned_cols=75 Identities=15% Similarity=0.199 Sum_probs=57.1
Q ss_pred eEEEeCCcEEEEeeeCCccCCcceeEEEEe--CCCeeeEEeee----ecCCceEEEccCCeEEEeecCcCCCCcceEEEe
Q psy12724 75 EHVLKGNSAVLKCHIPSFVADYVAVESWIS--DQGEELFVDMT----ESTDGKYLVLPSGELHIRDVGPEDGYKSYQCRT 148 (167)
Q Consensus 75 ~~v~~G~~a~l~C~~~~~~~~p~p~i~W~k--~~~~~l~~~~~----~~~~~r~~~~~~g~L~I~~v~~~D~~G~Y~C~a 148 (167)
..+.+|++|.|+|..... +.|.|.|.|+| ++ ..|..... -..++|+.++++|.|.|++++.+|+ |.|+|.|
T Consensus 9 v~g~~G~sv~L~~~~~~~-~~~~~~i~W~k~~~~-~~i~~~~~~~~~~~~~~R~~~~~ngsL~I~~v~~~Ds-G~Y~c~~ 85 (182)
T 1hnf_A 9 TWGALGQDINLDIPSFQM-SDDIDDIKWEKTSDK-KKIAQFRKEKETFKEKDTYKLFKNGTLKIKHLKTDDQ-DIYKVSI 85 (182)
T ss_dssp EEEETTSCEEECCTTCCC-CSSEEEEEEEEGGGC-CEEEEECGGGCEEESCTTEEECTTSCEEECSCCGGGC-EEEEEEE
T ss_pred EEEecCCCEEEeCCcccc-cCcCCEEEEEECCCC-cEEEEEeCccCCCCCCCeEEECCCCCEEECCCChhhC-EEEEEEE
Confidence 456789999999954321 34788999999 76 45421100 0136789999999999999999999 9999999
Q ss_pred eecC
Q psy12724 149 KHRL 152 (167)
Q Consensus 149 ~n~~ 152 (167)
.|..
T Consensus 86 ~n~~ 89 (182)
T 1hnf_A 86 YDTK 89 (182)
T ss_dssp EETT
T ss_pred EeCC
Confidence 9975
No 298
>3mtr_A N-CAM-1, NCAM-1, neural cell adhesion molecule 1; immunoglobulin domain, fibronectin type III repeat, CE adhesion; 1.80A {Homo sapiens}
Probab=99.24 E-value=1.6e-11 Score=92.11 Aligned_cols=73 Identities=21% Similarity=0.288 Sum_probs=57.4
Q ss_pred EecCeEEEeCCcEEEEeeeCCccCCcceeEEEEeCCCeeeEEeeeecCCceEEEcc---CCeEEEeecCcCCCCcceEEE
Q psy12724 71 NIMDEHVLKGNSAVLKCHIPSFVADYVAVESWISDQGEELFVDMTESTDGKYLVLP---SGELHIRDVGPEDGYKSYQCR 147 (167)
Q Consensus 71 ~~~~~~v~~G~~a~l~C~~~~~~~~p~p~i~W~k~~~~~l~~~~~~~~~~r~~~~~---~g~L~I~~v~~~D~~G~Y~C~ 147 (167)
.+.+..+.+|+++.|.|.+. |+|.|.++|+|++ ..+.. ....++.+.. ++.|.|.+++.+|+ |.|+|.
T Consensus 24 ~p~~~~~~~G~~v~l~C~~~---g~p~p~i~W~~~g-~~l~~----~~~~~~~~~~~~~~~~L~i~~~~~~d~-G~Y~C~ 94 (215)
T 3mtr_A 24 GPVAVYTWEGNQVNITCEVF---AYPSATISWFRDG-QLLPS----SNYSNIKIYNTPSASYLEVTPDSENDF-GNYNCT 94 (215)
T ss_dssp CCSEEEECTTCCEEEEEEEE---EESCCEEEEEETT-EESSC----SSSCSEEEEEETTEEEEEECCCSGGGC-EEEEEE
T ss_pred CCceEEEECCCCEEEEEEEe---ecCCCEEEEEECC-eECCC----CCCccEEEecCCCeeEEEEecCChhhC-eEEEEE
Confidence 34456788999999999998 4588999999997 55532 1224555543 45899999999998 999999
Q ss_pred eeecC
Q psy12724 148 TKHRL 152 (167)
Q Consensus 148 a~n~~ 152 (167)
|.|..
T Consensus 95 a~n~~ 99 (215)
T 3mtr_A 95 AVNRI 99 (215)
T ss_dssp EECSS
T ss_pred EEECC
Confidence 99987
No 299
>1hzh_H IGG, immunoglobulin heavy chain; antibody, immune system; HET: NAG BMA MAN GAL FUC; 2.70A {Homo sapiens} SCOP: b.1.1.1 b.1.1.2 b.1.1.2 b.1.1.2 PDB: 2ig2_H 1mco_H*
Probab=99.24 E-value=3.6e-12 Score=106.12 Aligned_cols=122 Identities=18% Similarity=0.318 Sum_probs=77.2
Q ss_pred EEEeCCcEEEEeecCCC-CCCcceeeEEeeCCCce----ee---ecCCce-----E-E------EeeeEEEecC------
Q psy12724 21 FVIKGNAAVFKCNLPSF-VSDHLDVVSWADTDGGQ----YQ---IDNQDF-----V-V------SQSYTVNIMD------ 74 (167)
Q Consensus 21 ~v~~G~~~~l~C~a~~~-~~~~~~~i~W~k~~~~~----~~---~~~~~~-----v-~------~g~y~c~~~~------ 74 (167)
.+.+|+++.|.|.+.+. |.+ +.|.|+|++... .. ..+.++ + + .|.|+|.+.+
T Consensus 143 ~~~~g~~v~L~C~~~g~~P~~--~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~s~L~i~~~~~~dG~Y~C~a~n~~~~~~ 220 (457)
T 1hzh_H 143 KSTSGGTAALGCLVKDYFPEP--VTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTK 220 (457)
T ss_dssp CCCTTCCEEEEEEEESBBSCC--CEEEETTTTBCTTEEEEEEEECTTSCEEEEEEEEECSGGGGTSCCEEEEEEGGGTEE
T ss_pred cccCCCcEEEEEEEeEEeCCC--eEEEEEeCCEeccceEcCceECCCCCEEEEEEEEecccccCCceEEEEEEeCCCCcc
Confidence 35789999999999987 332 479999986321 10 011111 1 1 2899998632
Q ss_pred ---------------------------eEE-----------EeCCcEEEEeeeCCccCCcce---eEEEEeCCCeeeEEe
Q psy12724 75 ---------------------------EHV-----------LKGNSAVLKCHIPSFVADYVA---VESWISDQGEELFVD 113 (167)
Q Consensus 75 ---------------------------~~v-----------~~G~~a~l~C~~~~~~~~p~p---~i~W~k~~~~~l~~~ 113 (167)
..+ .+|+++.|.|.+.+. .|.| .++|+|++ ..+...
T Consensus 221 ~~~~v~~~~~~~~~~~~~~~~~~~~~~p~v~~~~p~~~~~~~~G~~v~L~C~~~g~--~p~p~~~~i~W~k~~-~~~~~~ 297 (457)
T 1hzh_H 221 VDKKAEPKSCDKTHTCPPCPAPELLGGPSVFLFPPKPKDTLMISRTPEVTCVVVDV--SHEDPEVKFNWYVDG-VEVHNA 297 (457)
T ss_dssp EEEECCCCCSCSSCSCCSCCCCCCSSSCEEEEECCCHHHHHCTTSCCCEEEEEECC--CTTCCCCEEEEEETT-EEECCC
T ss_pred eeEEecccCCCcccccCCCCCccccCCceEEeECcCchhhcccCCceEEEEEEEcc--cCCCCceEEEEEeCC-cccccc
Confidence 011 239999999999753 2333 89999998 454211
Q ss_pred eeecCCceEEEccCCeEEEeec---CcCC---CCcceEEEeeecC
Q psy12724 114 MTESTDGKYLVLPSGELHIRDV---GPED---GYKSYQCRTKHRL 152 (167)
Q Consensus 114 ~~~~~~~r~~~~~~g~L~I~~v---~~~D---~~G~Y~C~a~n~~ 152 (167)
.........+|.|.|.++ ..+| + |.|+|.|.|..
T Consensus 298 ----~~~~~~~~~~g~~~~~~~l~i~~~d~~d~-G~Y~C~a~n~~ 337 (457)
T 1hzh_H 298 ----KTKPREEQYNSTYRVVSVLTVLHQDWLNG-KEYKCKVSNKA 337 (457)
T ss_dssp ----EEEEEEECTTSCEEEEEEECCCHHHHHHT-CCEEEEEECTT
T ss_pred ----ccccceecCCCcEEEEEEEEECHHHccCC-CcEEEEEeCCC
Confidence 112233445677776643 3555 9 99999999865
No 300
>3mjg_X Beta-type platelet-derived growth factor receptor; protein-protein complex, growth factor-receptor complex, TRA hormone complex; HET: NDG NAG; 2.30A {Homo sapiens}
Probab=99.23 E-value=4.9e-11 Score=92.74 Aligned_cols=113 Identities=16% Similarity=0.181 Sum_probs=74.0
Q ss_pred eeEEeEEEEEeCCcEEEEeecCCCCCCcceeeEEeeCCCceee---e-cCC---ceE--------EEeeeEEEecC----
Q psy12724 14 EAQVYDVFVIKGNAAVFKCNLPSFVSDHLDVVSWADTDGGQYQ---I-DNQ---DFV--------VSQSYTVNIMD---- 74 (167)
Q Consensus 14 ~~~~~~~~v~~G~~~~l~C~a~~~~~~~~~~i~W~k~~~~~~~---~-~~~---~~v--------~~g~y~c~~~~---- 74 (167)
.....+..|.+|+++.|.|.+.+. ++|.|++..... . ... ..+ ..|.|+|.+.+
T Consensus 4 ~~~~~~~~v~~G~~v~L~C~~~~~-------v~W~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~D~G~Y~C~a~n~~g~ 76 (289)
T 3mjg_X 4 TPPGPELVLNVSSTFVLTCSGSAP-------VVWERMSQEPPQEMAKAQDGTFSSVLTLTNLTGLDTGEYFCTHNDSRGL 76 (289)
T ss_dssp CSSCSEEECCTTCCEEEEEEESSC-------CEEEBTTBCCSEEEEECTTSCEEEEEEECSCCGGGCEEEEEECCC----
T ss_pred cCCCCeEEEeCCCcEEEEEeccce-------EEEECCCCCcccceeccCCCceeEEEEEccCChhhCEEEEEEEcccCCC
Confidence 344557888999999999999753 899998764211 1 111 011 27999998742
Q ss_pred ----------------------------eEEEeCCcEEEEeeeCCccCCcceeEEEEeCC-CeeeEEeeeecCCceEEEc
Q psy12724 75 ----------------------------EHVLKGNSAVLKCHIPSFVADYVAVESWISDQ-GEELFVDMTESTDGKYLVL 125 (167)
Q Consensus 75 ----------------------------~~v~~G~~a~l~C~~~~~~~~p~p~i~W~k~~-~~~l~~~~~~~~~~r~~~~ 125 (167)
..+.+|+++.|.|.+. +|.|.++|++++ +..+. ..+ -.
T Consensus 77 ~~~~~~~~~v~v~~p~~~~~~~~~~~~~~~v~~G~~v~l~C~~~----~p~~~v~w~~~~~~~~~~--------~~~-~~ 143 (289)
T 3mjg_X 77 ETDERKRLYIFVPDPTVGFLPNDAEELFIFLTEITEITIPCRVT----DPQLVVTLHEKKGDVALP--------VPY-DH 143 (289)
T ss_dssp --CCCEEEEEECCCTTCCBCCCCHHHHEEEESSCCCEEECCCBS----CTTSCEEEEESSCCSCCC--------CCE-ET
T ss_pred CcCcEEeEEEEEECCCcCcccCCCCcceEEeecCCeEEEEeEcC----CCCceEEEEeCCCCCccc--------eee-cC
Confidence 2255799999999996 367788998875 22221 111 11
Q ss_pred cCCeEEEeecCcCCCCcceEEEeeecC
Q psy12724 126 PSGELHIRDVGPEDGYKSYQCRTKHRL 152 (167)
Q Consensus 126 ~~g~L~I~~v~~~D~~G~Y~C~a~n~~ 152 (167)
..|.+ ..+|+ |.|+|.|.|..
T Consensus 144 ~~~~~-----~~~d~-G~Y~C~a~n~~ 164 (289)
T 3mjg_X 144 QRGFS-----GIFED-RSYICKTTIGD 164 (289)
T ss_dssp TTEEE-----ECCCS-SEEEEEEEETT
T ss_pred CcCee-----eeccC-cEEEEEEEeCC
Confidence 12222 36798 99999999765
No 301
>1dn0_B IGM-kappa cold agglutinin (heavy chain); FAB, antibody, human, immune system; 2.28A {Homo sapiens} SCOP: b.1.1.1 b.1.1.2 PDB: 1qlr_B* 2j6e_H* 2agj_H* 2h32_H
Probab=99.23 E-value=2.8e-10 Score=87.04 Aligned_cols=132 Identities=14% Similarity=0.161 Sum_probs=84.0
Q ss_pred eEEeEEEEEeCCcEEEEeecCCCCCCcceeeEEeeCC-Cc---eee-ec-----------CCc------------eE---
Q psy12724 15 AQVYDVFVIKGNAAVFKCNLPSFVSDHLDVVSWADTD-GG---QYQ-ID-----------NQD------------FV--- 63 (167)
Q Consensus 15 ~~~~~~~v~~G~~~~l~C~a~~~~~~~~~~i~W~k~~-~~---~~~-~~-----------~~~------------~v--- 63 (167)
.++..+.+.+|+++.|.|.+.+.+.. .+.+.|+|.+ +. .+. .+ ..| .+
T Consensus 5 ~qp~~~~v~~G~~v~L~C~~~~~~~~-~~~v~W~r~~~~~~~~~l~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~~L~I~ 83 (232)
T 1dn0_B 5 QQWGAGLLKPSETLSLTCAVYGGSFS-DYYWSWIRQPPGKGLEWIGEINHSGSTNYNPSLKSRVTISVDTSKNQFSLKLS 83 (232)
T ss_dssp EEECCCEECTTSCEEEEEEEESSCCS-SCCEEEEEECTTSCCEEEEEECTTCCEEECTTTTTTEEEEEETTTTEEEEEEC
T ss_pred ECCCCEEEeCCCcEEEEEEEccccCC-CceEEEEEeCCCCCeEEEEEEecCCceeeCCccCCeEEEEEeCCCCEEEEEEC
Confidence 45777899999999999999876421 2469999853 21 110 00 011 11
Q ss_pred -----EEeeeEEEec--C-------e-------EE-------------------EeC-CcEEEEeeeCCccCCcce-eEE
Q psy12724 64 -----VSQSYTVNIM--D-------E-------HV-------------------LKG-NSAVLKCHIPSFVADYVA-VES 101 (167)
Q Consensus 64 -----~~g~y~c~~~--~-------~-------~v-------------------~~G-~~a~l~C~~~~~~~~p~p-~i~ 101 (167)
.+|.|.|.+. + . .| ..| +.+.|.|.+.+. .|.| .++
T Consensus 84 ~v~~~D~G~Y~C~~~~~~~~~~~~~~~~~~~~L~V~~~~~~~P~v~~~~p~~~~~~g~~~v~L~C~~~g~--~P~p~~v~ 161 (232)
T 1dn0_B 84 SVTAADTAVYYCARPPHDTSGHYWNYWGQGTLVTVSSGSASAPTLFPLVSCENSPSDTSSVAVGCLAQDF--LPDSITFS 161 (232)
T ss_dssp SCCGGGCEEEEEEECSSTTSCSCCSEECCCEEEEECSSCCBCCEEEEEECC------CCSEEEEEEEEEE--BSSCCEEE
T ss_pred CCCcccCEEEEEEEecCCcCCchhhhcccceEEEEccCCCCCCceEEeccccccCCCCCcEEEEEEEEEE--eCCCeEEE
Confidence 1799999875 2 0 01 157 899999999753 3666 899
Q ss_pred EEe-CCCeeeEEee---eecCCceEEEccCCeEEEeecCc--CCCCcceEEEeeecCc
Q psy12724 102 WIS-DQGEELFVDM---TESTDGKYLVLPSGELHIRDVGP--EDGYKSYQCRTKHRLT 153 (167)
Q Consensus 102 W~k-~~~~~l~~~~---~~~~~~r~~~~~~g~L~I~~v~~--~D~~G~Y~C~a~n~~~ 153 (167)
|+| |+ ..+.... ....++.|.. .+.|.|.+... +|. |.|+|.|.|...
T Consensus 162 W~~~~g-~~l~~~~~~~~~~~~~~~~~--~s~L~i~~~~~~~~d~-g~ytC~v~n~~~ 215 (232)
T 1dn0_B 162 WKYKNN-SDISSTRGFPSVLRGGKYAA--TSQVLLPSKDVMAGTD-EHVVCKVQHPNG 215 (232)
T ss_dssp EEETTS-CEECCEEECCCEEETTEEEE--EEEEEECTTCC---CC-CEEEEEEECTTC
T ss_pred EEcCCC-CceeeEEECCccccCCcEEE--EEEEEEcHHHhcccCC-CeEEEEEEeCCC
Confidence 999 76 4542100 0001245544 35799999987 898 999999999873
No 302
>3liz_H 4C3 monoclonal antibody heavy chain; hydrolase-immune system complex; HET: NAG BMA MAN; 1.80A {Mus musculus} PDB: 3rvv_D* 3rvu_D 3rvt_D* 3rvw_D* 3rvx_D 1lo4_H 1ub6_H 3r06_B 3r08_H
Probab=99.23 E-value=6.7e-11 Score=91.53 Aligned_cols=130 Identities=12% Similarity=0.191 Sum_probs=83.3
Q ss_pred eEEeEEEEEeCCcEEEEeecCCCCCCcceeeEEeeCC-Cce--ee--e--cC----------Cc------------eE--
Q psy12724 15 AQVYDVFVIKGNAAVFKCNLPSFVSDHLDVVSWADTD-GGQ--YQ--I--DN----------QD------------FV-- 63 (167)
Q Consensus 15 ~~~~~~~v~~G~~~~l~C~a~~~~~~~~~~i~W~k~~-~~~--~~--~--~~----------~~------------~v-- 63 (167)
.++..+.|.+|+++.|.|.+.+...+ .+.+.|+|.+ +.. +. . ++ .| .+
T Consensus 5 ~~p~~v~v~~G~~v~L~C~~~~~~~~-~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~sL~I 83 (253)
T 3liz_H 5 VESGGGLVQPGGSLKLSCAASGFTFS-SFAMSWGRQTPDKRLELVATINSNGASTYYPDTVKGRFTISRDNAKNTLFLQM 83 (253)
T ss_dssp EEECCCEECTTCCEEEEEEEESSCGG-GSCEEEEEECTTSCEEEEEEECTTSSCEECCTTTTTTCEEEEEGGGTEEEEEE
T ss_pred EcCCCEEECCCCcEEEEEEeeCcccc-CceEEEEEECCCCCcEEEEEEecCCCccccCcccCCcEEEEEeCCCCEEEEEE
Confidence 45677899999999999999764322 2469998853 111 11 0 00 11 01
Q ss_pred ------EEeeeEEEecCe--------------E-------------------EEeCCcEEEEeeeCCccCCcce-eEEEE
Q psy12724 64 ------VSQSYTVNIMDE--------------H-------------------VLKGNSAVLKCHIPSFVADYVA-VESWI 103 (167)
Q Consensus 64 ------~~g~y~c~~~~~--------------~-------------------v~~G~~a~l~C~~~~~~~~p~p-~i~W~ 103 (167)
.+|.|.|.+.+. . +..|+.+.|.|.+.+. .|.| .++|+
T Consensus 84 ~~v~~~DsG~Y~C~~~~~~~~~~~~~~~~~~l~V~~~~~~~P~i~~~~~~~~~~~g~~v~L~C~~~g~--~P~~~~v~W~ 161 (253)
T 3liz_H 84 SSLKSEDTAMYYCTRDPAGRAWFAYWGQGTLVTVSAAKTTPPSVYPLAPGSAAQTNSMVTLGCLVKGY--FPEPVTVTWN 161 (253)
T ss_dssp CSCCGGGCEEEEEEECCBTTTBCCEECCCEEEEECSSCCBCCEEEEECC------CCEEEEEEEEEEE--BSSCCEEEEG
T ss_pred CCCChhhCEEEEEEEecCCcceeeEECCCEEEEEeccCCCCCeEEEecCCcccCCCCcEEEEEEEeeE--eCCCeEEEEE
Confidence 179999987431 0 2368999999999863 3666 79999
Q ss_pred eCCCeee-EEee-eecCCceEEEccCCeEEEeecCcCCCCcceEEEeeecC
Q psy12724 104 SDQGEEL-FVDM-TESTDGKYLVLPSGELHIRDVGPEDGYKSYQCRTKHRL 152 (167)
Q Consensus 104 k~~~~~l-~~~~-~~~~~~r~~~~~~g~L~I~~v~~~D~~G~Y~C~a~n~~ 152 (167)
|++. .+ .... .....++|.+. +.|.|.+.+.+| |.|+|.|.|..
T Consensus 162 ~~~~-~~~~~~~~~~~~~g~~~~~--s~L~i~~~~~~d--g~ytC~v~~~~ 207 (253)
T 3liz_H 162 SGSL-SSGVHTFPAVLQSDLYTLS--SSVTVPSSTWPS--ETVTCNVAHPA 207 (253)
T ss_dssp GGTB-CTTEEECCCEEETTEEEEE--EEEEEETTSTTT--SCCEEEEEEGG
T ss_pred eCCe-ecceEeCCccccCCeEEEE--EEEEEcHHHCCC--ceEEEEEEECC
Confidence 9873 21 0000 00012566543 679999998877 99999999987
No 303
>2ptt_A CD48 antigen; CD244, CD48, NK cell receptor, X-RAY, immune system; 1.63A {Mus musculus} PDB: 2ptv_A
Probab=99.22 E-value=7.8e-11 Score=80.12 Aligned_cols=83 Identities=20% Similarity=0.317 Sum_probs=58.4
Q ss_pred eEEEeCCcEEEEeee-CCccCCcceeEEEEeCCCeeeEEee--------eecCCceEEEc-cCCeEEEeecCcCCCCcce
Q psy12724 75 EHVLKGNSAVLKCHI-PSFVADYVAVESWISDQGEELFVDM--------TESTDGKYLVL-PSGELHIRDVGPEDGYKSY 144 (167)
Q Consensus 75 ~~v~~G~~a~l~C~~-~~~~~~p~p~i~W~k~~~~~l~~~~--------~~~~~~r~~~~-~~g~L~I~~v~~~D~~G~Y 144 (167)
..+.+|++|+|+|.. . +.+.+.+.|+|+.+..+.... .+.-.+|+.+. .++.|.|++++.+|+ |.|
T Consensus 13 v~~~~G~~v~L~C~~~~---~~~~~~v~W~~~~~~~i~~~~~~~~~~~~~~~~~~R~~~~~~~~sL~I~~v~~~Ds-G~Y 88 (110)
T 2ptt_A 13 INAYTGSNVTLKIHKDP---LGPYRRITWLHTKNQKILEYNYNSTKTIFESEFKGRVYLEENNGALHISNVRKEDK-GTY 88 (110)
T ss_dssp EEEETTSCEEECSCSSC---CCSCSEEEEEESTTBEEEEEETTSCEEECSSTTTTTEEECTTTCCEEESSCCGGGC-EEE
T ss_pred EEEecCCcEEEeCCccC---CCCcCEEEEEecCCccEEEEECCCCceeeccccCCcEEEeCCCccEEECCCCcccC-eEE
Confidence 578899999999998 4 346678999995443232110 00112577776 567899999999999 999
Q ss_pred EEEeeecC--cceEEEeee
Q psy12724 145 QCRTKHRL--TGETRLSAT 161 (167)
Q Consensus 145 ~C~a~n~~--~~~~~l~~~ 161 (167)
.|.+.+.. ...++|++.
T Consensus 89 ~C~v~~~~~~~~~~~L~V~ 107 (110)
T 2ptt_A 89 YMRVLRETENELKITLEVF 107 (110)
T ss_dssp EEEEESSSBCCEEEEEEEE
T ss_pred EEEEEcCCCcEEEEEEEEE
Confidence 99998765 334555553
No 304
>1hxm_B Gamma-delta T-cell receptor; IG domain, TCR, GDTCR, immune system; 3.12A {Homo sapiens} SCOP: b.1.1.1 b.1.1.2
Probab=99.22 E-value=2.3e-10 Score=87.83 Aligned_cols=133 Identities=14% Similarity=0.210 Sum_probs=84.3
Q ss_pred ceeeEEeEEEEEeCCcEEEEeecCCCCCCcceeeEEeeCC-Cce---ee-e------------cCCc------------e
Q psy12724 12 YYEAQVYDVFVIKGNAAVFKCNLPSFVSDHLDVVSWADTD-GGQ---YQ-I------------DNQD------------F 62 (167)
Q Consensus 12 ~~~~~~~~~~v~~G~~~~l~C~a~~~~~~~~~~i~W~k~~-~~~---~~-~------------~~~~------------~ 62 (167)
.+...+..+.+.+|+++.|.|.+.+...+ .+.+.|+|.+ +.. +. . ...| .
T Consensus 3 ~v~q~p~~v~~~~G~~v~L~C~~~~~~~~-~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~~ 81 (242)
T 1hxm_B 3 HLEQPQISSTKTLSKTARLECVVSGITIS-ATSVYWYRERPGEVIQFLVSISYDGTVRKESGIPSGKFEVDRIPETSTST 81 (242)
T ss_dssp EEECCCSEEEEETTCCEEEEEEEESSCTT-TSCEEEEEECTTSCCEEEEEECSSSCEEECTTCCTTSEEEEEETTTTEEE
T ss_pred ccCcCCceEEecCCCcEEEEEEeCCcccc-CceEEEEEeCCCCCcEEEEEEecCCceecCCcccCCeEEEEecCCCcEEE
Confidence 45667888999999999999999875211 2479999853 211 11 0 0111 1
Q ss_pred E--------EEeeeEEEecCe-----------------EEE-----------------------eCCcEEEEeeeCCccC
Q psy12724 63 V--------VSQSYTVNIMDE-----------------HVL-----------------------KGNSAVLKCHIPSFVA 94 (167)
Q Consensus 63 v--------~~g~y~c~~~~~-----------------~v~-----------------------~G~~a~l~C~~~~~~~ 94 (167)
+ .+|.|.|.+.+. .|. +|+.+.|.|.+.+.
T Consensus 82 L~I~~v~~~D~G~Y~C~~~~~~~~~~~~~~~~~~~~~L~V~~~~~~~~~~p~~~v~~p~~~~~~~g~~v~L~C~~~g~-- 159 (242)
T 1hxm_B 82 LTIHNVEKQDIATYYCALWEAQQELGKKIKVFGPGTKLIITDKQLDADVSPKPTIFLPSIAETKLQKAGTYLCLLEKF-- 159 (242)
T ss_dssp EEECSCCGGGCEEEEEEEEEECSSTTCEEEEECCCEEEEEESSCCCSCCSCBCCCCCCCGGGGGSSSCEEEEEEEEEE--
T ss_pred EEECCCCcccCEEEEEeeecCCccccccceeEcCcEEEEEcccccCCCcCCCceEECCChhhcccCCCceEEEEEeeE--
Confidence 1 169999987431 111 28889999999753
Q ss_pred Ccc-eeEEEEeCCCeeeEEee---eecCCceEEEccCCeEEEeecCcCCCCcceEEEeeecC
Q psy12724 95 DYV-AVESWISDQGEELFVDM---TESTDGKYLVLPSGELHIRDVGPEDGYKSYQCRTKHRL 152 (167)
Q Consensus 95 ~p~-p~i~W~k~~~~~l~~~~---~~~~~~r~~~~~~g~L~I~~v~~~D~~G~Y~C~a~n~~ 152 (167)
.|. +.++|+|++...+.... ....++.|.+ ...|.|.+++. | |.|+|.|.|..
T Consensus 160 ~P~~~~v~W~~~~~~~l~~~~~~~~~~~~~~~~~--~s~L~i~~~~~-~--g~y~C~v~n~~ 216 (242)
T 1hxm_B 160 FPDVIKIHWEEKKSNTILGSQEGNTMKTNDTYMK--FSWLTVPEKSL-D--KEHRCIVRHEN 216 (242)
T ss_dssp SSCCEEEEEEESSSCCCCCCEECCCEECSSSEEE--EEEEEECTGGG-G--SCEEEEEEETT
T ss_pred ECCCeEEEEEcCCCEeecCccccceecCCCcEEE--EEEEEEccccC-C--CEEEEEEEeCC
Confidence 254 78999999742332110 0012234433 23699988775 4 99999999986
No 305
>2jll_A NCAM2, neural cell adhesion molecule 2; immunoglobulin domain, immunoglobulin superfamily, transmembrane, phosphoprotein, membrane, glycoprotein; HET: NAG; 2.30A {Homo sapiens} PDB: 2xyc_A* 2jlk_A* 2doc_A
Probab=99.22 E-value=4.2e-11 Score=96.73 Aligned_cols=76 Identities=25% Similarity=0.434 Sum_probs=58.4
Q ss_pred ecCeEEEeCCcEEEEeeeCCccCCcceeEEEEeCC-CeeeEEeeeecCCceEEEcc---CCeEEEeecCcCCCCcceEEE
Q psy12724 72 IMDEHVLKGNSAVLKCHIPSFVADYVAVESWISDQ-GEELFVDMTESTDGKYLVLP---SGELHIRDVGPEDGYKSYQCR 147 (167)
Q Consensus 72 ~~~~~v~~G~~a~l~C~~~~~~~~p~p~i~W~k~~-~~~l~~~~~~~~~~r~~~~~---~g~L~I~~v~~~D~~G~Y~C~ 147 (167)
..+..+.+|+++.|.|.+. |.|.|.++|+|++ +..+.... ...++|+.+.. ++.|.|.+++.+|+ |.|+|.
T Consensus 7 ~~~~~~~~G~~v~l~C~~~---g~p~p~v~W~~~~~g~~~~~~~-~~~~~~~~~~~~~~~~~L~i~~v~~~D~-G~Y~C~ 81 (389)
T 2jll_A 7 LKNETTYENGQVTLVCDAE---GEPIPEITWKRAVDGFTFTEGD-KSLDGRIEVKGQHGSSSLHIKDVKLSDS-GRYDCE 81 (389)
T ss_dssp CCCEEEETTSEEEEEEEEE---CSSCCEEEEEETTTTEEECC---CCSSSSEEEEECSSEEEEEEESCCGGGC-EEEEEE
T ss_pred cCceEEeCCCeEEEEEEee---cccCCeEEEEeCCCCceeccCc-CCCCCeEEEeccCCcceEEEcccChhhC-EEEEEE
Confidence 5677889999999999998 4589999999992 24543210 01246776653 45899999999999 999999
Q ss_pred eeecC
Q psy12724 148 TKHRL 152 (167)
Q Consensus 148 a~n~~ 152 (167)
|.|..
T Consensus 82 a~n~~ 86 (389)
T 2jll_A 82 AASRI 86 (389)
T ss_dssp EECSS
T ss_pred EEeCC
Confidence 99976
No 306
>3q0h_A T cell immunoreceptor with IG and ITIM domains; immune receptor, adhesion, structural genomics, NEW YORK STR genomics research consortium, nysgrc; 1.70A {Homo sapiens} PDB: 3rq3_A 3udw_A* 3ucr_A
Probab=99.22 E-value=8.5e-11 Score=81.47 Aligned_cols=85 Identities=22% Similarity=0.289 Sum_probs=59.1
Q ss_pred cCeEEEeCCcEEEEeeeCCccCCcceeEEEEeCCCeeeEEee-------eecCCceEEEccCCeEEEeecCcCCCCcceE
Q psy12724 73 MDEHVLKGNSAVLKCHIPSFVADYVAVESWISDQGEELFVDM-------TESTDGKYLVLPSGELHIRDVGPEDGYKSYQ 145 (167)
Q Consensus 73 ~~~~v~~G~~a~l~C~~~~~~~~p~p~i~W~k~~~~~l~~~~-------~~~~~~r~~~~~~g~L~I~~v~~~D~~G~Y~ 145 (167)
.+..+.+|++|+|+|...+. ..+.+.+.|+|++ ..+.-.. .+.-.+|+.+..++.|.|++++.+|+ |.|.
T Consensus 11 ~~v~~~~G~~v~L~C~~~~~-~~~~~~v~W~k~~-~~i~~~~~~~~~~~~~~~~~R~~~~~~~sL~I~~v~~~D~-G~Y~ 87 (117)
T 3q0h_A 11 GNISAEKGGSIILQCHLSST-TAQVTQVNWEQQD-QLLAICNADLGWHISPSFKDRVAPGPGLGLTLQSLTVNDT-GEYF 87 (117)
T ss_dssp CCEEEETTCCEEECEEEESC-CCEEEEEEEEETT-EEEEEEETTTEEECCGGGTTTEEECSTTCEEECSCCGGGC-EEEE
T ss_pred CCEEEecCCCEEEEEEecCC-CCCEEEEEEEeCC-EEEEEEECCCCceeCccccCcEEeCCceEEEEeeCChhhC-EEEE
Confidence 34678899999999998642 2345689999986 3332110 01124678776788999999999999 9999
Q ss_pred EEeee-cC---cceEEEee
Q psy12724 146 CRTKH-RL---TGETRLSA 160 (167)
Q Consensus 146 C~a~n-~~---~~~~~l~~ 160 (167)
|.+.+ .. .+.+.|++
T Consensus 88 C~v~~~~~g~~~~~~~L~V 106 (117)
T 3q0h_A 88 CIYHTYPDGTYTGRIFLEV 106 (117)
T ss_dssp EEEEEETTCCEEEEEEEEE
T ss_pred EEEEECCCCCeEEEEEEEE
Confidence 98754 32 34456655
No 307
>2nzi_A Titin; IG-domain, FNIII-domain, transferase; 2.90A {Homo sapiens}
Probab=99.22 E-value=4.8e-11 Score=93.37 Aligned_cols=75 Identities=21% Similarity=0.392 Sum_probs=59.1
Q ss_pred eEEEecCeEEEeCCcEEEEeeeCCccCCcceeEEEEeCCCeeeEEeeeecCCceEEEc--cCC--eEEEeecCcCCCCcc
Q psy12724 68 YTVNIMDEHVLKGNSAVLKCHIPSFVADYVAVESWISDQGEELFVDMTESTDGKYLVL--PSG--ELHIRDVGPEDGYKS 143 (167)
Q Consensus 68 y~c~~~~~~v~~G~~a~l~C~~~~~~~~p~p~i~W~k~~~~~l~~~~~~~~~~r~~~~--~~g--~L~I~~v~~~D~~G~ 143 (167)
+.-.+.+..+.+|+++.|.|.+. +.|.|.++|+|++ ..+.. .+.++.+. .+| .|.|.+++.+|+ |.
T Consensus 7 ~~~~p~~~~v~~G~~v~l~C~~~---g~p~~~v~W~~~~-~~~~~-----~~~~~~~~~~~~~~~~L~i~~v~~~d~-G~ 76 (305)
T 2nzi_A 7 FKEELRNLNVRYQSNATLVCKVT---GHPKPIVKWYRQG-KEIIA-----DGLKYRIQEFKGGYHQLIIASVTDDDA-TV 76 (305)
T ss_dssp EEECCCCEEECTTCCEEEEEEEE---CSSCCEEEEEETT-EECCC-----CSSSEEEEEETTTEEEEEESSCCGGGC-SE
T ss_pred eeecccceEEeCCCcEEEEEEEe---CCCCCeEEEEECC-EEccc-----CCCeEEEEECCCCEEEEEEccCChhhC-eE
Confidence 44455677889999999999997 4588999999997 45532 23455443 345 899999999999 99
Q ss_pred eEEEeeecC
Q psy12724 144 YQCRTKHRL 152 (167)
Q Consensus 144 Y~C~a~n~~ 152 (167)
|+|.|.|..
T Consensus 77 Y~C~a~n~~ 85 (305)
T 2nzi_A 77 YQVRATNQG 85 (305)
T ss_dssp EEEEEEETT
T ss_pred EEEEEEcCC
Confidence 999999986
No 308
>3bp6_B Programmed cell death 1 ligand 2; PD-1, PD-L2, complex, costimulation, glycoprotein, immunoglo domain, membrane, transmembrane, receptor; 1.60A {Mus musculus} PDB: 3bp5_B 3rnq_B 3bov_A 3rnk_B
Probab=99.21 E-value=4.1e-11 Score=88.80 Aligned_cols=68 Identities=19% Similarity=0.224 Sum_probs=51.9
Q ss_pred eEEEeCCcEEEEeeeCCccCCcc-----eeEEEEeCCCeeeEEeeeecCCceEEEccC------CeEEEeecCcCCCCcc
Q psy12724 75 EHVLKGNSAVLKCHIPSFVADYV-----AVESWISDQGEELFVDMTESTDGKYLVLPS------GELHIRDVGPEDGYKS 143 (167)
Q Consensus 75 ~~v~~G~~a~l~C~~~~~~~~p~-----p~i~W~k~~~~~l~~~~~~~~~~r~~~~~~------g~L~I~~v~~~D~~G~ 143 (167)
..+.+|+++.|+|.+.+. |. +.++|+|+++.... ..+|+.+..+ +.|.|.+++.+|+ |.
T Consensus 12 v~v~~G~~v~L~C~~~~~---p~~~~~~~~v~W~k~~~~~~~------~~~r~~~~~~~~~~~~~~L~I~~v~~~D~-G~ 81 (202)
T 3bp6_B 12 YTVDVGSSVSLECDFDRR---ECTELEGIRASLQKVENDTSL------QSERATLLEEQLPLGKALFHIPSVQVRDS-GQ 81 (202)
T ss_dssp EEEETTSCEEEEEEECTT---C---CTTEEEEEEECC--CCC------BCSSCEECGGGGGGTEEEEEECSCCGGGC-EE
T ss_pred EEEeCCCcEEEEEEecCC---CCCCccceEEEEEcCCCcccc------cCCceEEeeccccCCeeEEEECCCCHHHC-cE
Confidence 567899999999999753 54 88999995432221 2456665543 5799999999999 99
Q ss_pred eEEEeeecC
Q psy12724 144 YQCRTKHRL 152 (167)
Q Consensus 144 Y~C~a~n~~ 152 (167)
|+|.|.|..
T Consensus 82 Y~C~~~~~~ 90 (202)
T 3bp6_B 82 YRCLVICGA 90 (202)
T ss_dssp EEEEEEETT
T ss_pred EEEEEEeCC
Confidence 999999986
No 309
>1iga_A IGA1; immunoglobulin; NMR {Homo sapiens} PDB: 2esg_A 2qtj_A 3chn_A 1r70_B 3cm9_A
Probab=99.21 E-value=2.2e-11 Score=102.04 Aligned_cols=124 Identities=14% Similarity=0.266 Sum_probs=77.3
Q ss_pred EEEeCCcEEEEeecCCCCCCcceeeEEeeCCCceeee---------cCCc----eE--------EEeeeEEEecCe----
Q psy12724 21 FVIKGNAAVFKCNLPSFVSDHLDVVSWADTDGGQYQI---------DNQD----FV--------VSQSYTVNIMDE---- 75 (167)
Q Consensus 21 ~v~~G~~~~l~C~a~~~~~~~~~~i~W~k~~~~~~~~---------~~~~----~v--------~~g~y~c~~~~~---- 75 (167)
.+.+|+++.|.|.+.+.+....+.|+| ++ +..... ++.. .+ ..|.|+|.+.+.
T Consensus 258 ~~~~G~~v~L~C~~~g~~p~~~~~i~W-~~-~~~~~~~~~~~~~~~~g~~~~~~~L~I~~~~~~d~G~Y~C~a~n~~~~~ 335 (475)
T 1iga_A 258 DLLLGSEANLTCTLTGLRDASGVTFTW-TP-SSGKSAVQGPPERDLCGCYSVSSVLPGCAEPWNHGKTFTCTAAYPESKT 335 (475)
T ss_pred HhccCCceEEEEEEEcccCCCceEEEE-CC-CCcCCccccCceECCCCCEEEEEEEEEchHHhccCCcEEEEEEcCCCCC
Confidence 368999999999998764311147999 43 222110 1110 01 269999987430
Q ss_pred -------------------------EEEeCCcEEEEeeeCCccCCc-ceeEEEEeCCCeeeEEee------eec---CCc
Q psy12724 76 -------------------------HVLKGNSAVLKCHIPSFVADY-VAVESWISDQGEELFVDM------TES---TDG 120 (167)
Q Consensus 76 -------------------------~v~~G~~a~l~C~~~~~~~~p-~p~i~W~k~~~~~l~~~~------~~~---~~~ 120 (167)
.+..|+++.|.|.+.+. .| .+.++|+||+ ..+.... ... .++
T Consensus 336 ~~~~~v~~~~~~~~P~v~~~~~~~~~v~~g~~~~L~C~~~g~--~P~~~~v~W~k~g-~~l~~~~~~~~~~~~~~~~~~g 412 (475)
T 1iga_A 336 PLTATLSKSGNTFRPEVHLLPPPSEELALNELVTLTCLARGF--SPKDVLVRWLQGS-QELPREKYLTWASRQEPSQGTT 412 (475)
T ss_pred ceEEEeecCCCCCCCeEEEECCChHHhccCCceEEEEEEeee--ECCCCEEEEEECC-EECCCCceeecccccccCCCCC
Confidence 02358889999999864 23 3589999997 5553210 000 111
Q ss_pred eEEEccCCeEEEeecCcCCCCcceEEEeeecC
Q psy12724 121 KYLVLPSGELHIRDVGPEDGYKSYQCRTKHRL 152 (167)
Q Consensus 121 r~~~~~~g~L~I~~v~~~D~~G~Y~C~a~n~~ 152 (167)
.|.+ ...|.|.....+|. |.|+|.|.|..
T Consensus 413 t~~~--~s~L~i~~~~~~~~-g~YtC~a~n~~ 441 (475)
T 1iga_A 413 TFAV--TSILRVAAEDWKKG-DTFSCMVGHEA 441 (475)
T ss_pred cEEE--EEEEEEChHHhcCC-CEEEEEEEcCC
Confidence 2222 13578888888898 99999999986
No 310
>4gos_A V-SET domain-containing T-cell activation inhibit; immunoglobulin domain, glycoprotein, disulfide bond, immunit adaptive immunity; HET: NAG BMA MAN; 1.59A {Homo sapiens}
Probab=99.21 E-value=1.4e-10 Score=81.44 Aligned_cols=78 Identities=17% Similarity=0.250 Sum_probs=51.4
Q ss_pred CeEEEeCCcEEEEeeeCCccCCcceeEEEEeCCCee-eEEee---------eecCCceEEEccC------CeEEEeecCc
Q psy12724 74 DEHVLKGNSAVLKCHIPSFVADYVAVESWISDQGEE-LFVDM---------TESTDGKYLVLPS------GELHIRDVGP 137 (167)
Q Consensus 74 ~~~v~~G~~a~l~C~~~~~~~~p~p~i~W~k~~~~~-l~~~~---------~~~~~~r~~~~~~------g~L~I~~v~~ 137 (167)
...+.+|++|+|+|.+.+........|.|+|++... +.-.. .+...+|..+..+ ..|.|+|++.
T Consensus 14 ~v~g~vG~~v~L~C~~~~~~~~~~~~V~W~k~~~~~~v~~~~~g~~~~~~~~~~~~~R~~~~~~~~~~g~~sL~I~~v~~ 93 (125)
T 4gos_A 14 ASAGNIGEDGILSCTFEPDIKLSDIVIQWLKEGVLGLVHEFKEGKDELSEQDEMFRGRTAVFADQVIVGNASLRLKNVQL 93 (125)
T ss_dssp CEEEETTSCEEEEEEECCCSCGGGCEEEEEETTCSSBSEEEETTEECCTTBCGGGTTCEEECTTTGGGTBCCEEESSCCG
T ss_pred eEEEeCCCCEEEEEEEcCCcccCcEEEEEEEeccCceEEEEEeecccccccCccccceEEEecCCccCCeEEEEECCCCh
Confidence 456678999999999853211122368999975321 11100 0011356665533 3799999999
Q ss_pred CCCCcceEEEeeecC
Q psy12724 138 EDGYKSYQCRTKHRL 152 (167)
Q Consensus 138 ~D~~G~Y~C~a~n~~ 152 (167)
+|+ |.|.|.+.|..
T Consensus 94 ~D~-G~Y~C~v~~~~ 107 (125)
T 4gos_A 94 TDA-GTYKCYIITSK 107 (125)
T ss_dssp GGC-EEEEEEEEETT
T ss_pred HHC-EEEEEEEEeCC
Confidence 999 99999999976
No 311
>1iga_A IGA1; immunoglobulin; NMR {Homo sapiens} PDB: 2esg_A 2qtj_A 3chn_A 1r70_B 3cm9_A
Probab=99.21 E-value=2.2e-10 Score=95.95 Aligned_cols=132 Identities=14% Similarity=0.210 Sum_probs=85.4
Q ss_pred eEEeEEEEEeCCcEEEEeecCCCCCCcceeeEEeeCC-Cce---ee---ec----------CCc------------eE--
Q psy12724 15 AQVYDVFVIKGNAAVFKCNLPSFVSDHLDVVSWADTD-GGQ---YQ---ID----------NQD------------FV-- 63 (167)
Q Consensus 15 ~~~~~~~v~~G~~~~l~C~a~~~~~~~~~~i~W~k~~-~~~---~~---~~----------~~~------------~v-- 63 (167)
.++..+.+.+|+++.|.|.+.+.+.. .+.+.|+|++ ++. +. .+ ..| .+
T Consensus 6 ~~p~~~~v~~G~~v~L~C~~~~~~~~-~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~~L~I 84 (475)
T 1iga_A 6 EQSGAEVKKPGASVKVSCKASGYSFT-SYGLHWVRQAPGQRLEWMGWISAGTGNTKYSQKFRGRVTFTRDTSATTAYMGL 84 (475)
T ss_pred ccCCcEEEeCCCCEEEEEEecCCCCC-CceEEEEEeCCCCCcEEEEEEecCCCceecCcccCCceEEEEcCCCCeEEEEE
Confidence 46778999999999999999876422 2469999863 211 10 00 001 11
Q ss_pred ------EEeeeEEEecCe----------------EE------------------EeCCcEEEEeeeCCccCCcc-e-eEE
Q psy12724 64 ------VSQSYTVNIMDE----------------HV------------------LKGNSAVLKCHIPSFVADYV-A-VES 101 (167)
Q Consensus 64 ------~~g~y~c~~~~~----------------~v------------------~~G~~a~l~C~~~~~~~~p~-p-~i~ 101 (167)
.+|.|.|.+.+. .| .+|+.+.|.|.+.+. .|. | .++
T Consensus 85 ~~v~~~D~G~Y~C~~~~~~~~~~~~~~~~~~~~l~V~~~~~~~P~i~~~~~~~~~~g~~v~L~C~~~g~--~P~~p~~v~ 162 (475)
T 1iga_A 85 SSLRPEDTAVYYCARDPYGGGKSEFDYWGQGTLVTVSSASPTSPKVFPLSLCSTQPDGNVVIACLVQGF--FPQEPLSVT 162 (475)
T ss_pred CCCChhhCEEEEEEEeccCCCccceeeecCceEEEeccCCCcCCeEEecCccccCCCCeEEEEEEEeee--cCCCceEEE
Confidence 269999987431 01 258899999999853 255 4 899
Q ss_pred EEeCCCeeeEEeee---e-cCCceEEEccCCeEEEeecCcCCCCcceEEEeeecCc
Q psy12724 102 WISDQGEELFVDMT---E-STDGKYLVLPSGELHIRDVGPEDGYKSYQCRTKHRLT 153 (167)
Q Consensus 102 W~k~~~~~l~~~~~---~-~~~~r~~~~~~g~L~I~~v~~~D~~G~Y~C~a~n~~~ 153 (167)
|+|++. ....... . ..++.|.+. +.|.|.+++.+|+ |.|+|.|.|...
T Consensus 163 W~~~~~-~~~~~~~~~~~~~~~g~~~~~--s~L~i~~~~~~d~-g~Y~C~a~n~~~ 214 (475)
T 1iga_A 163 WSESGQ-GVTARNFPPSQDASGDLYTTS--SQLTLPATQCLAG-KSVTCHVKHYTN 214 (475)
T ss_pred EcCCCc-ccceEeCCceecCCCCcEEEE--EEEEechhHcCCC-ceEEEEEEECCC
Confidence 999862 2210000 0 122344332 3699999999999 999999999873
No 312
>1z9m_A GAPA225; nectin-like, IG-like domain, V domain, cell adhesion; 2.40A {Homo sapiens}
Probab=99.21 E-value=2.8e-11 Score=86.40 Aligned_cols=89 Identities=19% Similarity=0.319 Sum_probs=60.4
Q ss_pred eEEEecCeEEEeCCcEEEEeeeCCccCCcceeEEEEeCCCeeeEEee-eecCCceEEEcc----CCeEEEeecCcCCCCc
Q psy12724 68 YTVNIMDEHVLKGNSAVLKCHIPSFVADYVAVESWISDQGEELFVDM-TESTDGKYLVLP----SGELHIRDVGPEDGYK 142 (167)
Q Consensus 68 y~c~~~~~~v~~G~~a~l~C~~~~~~~~p~p~i~W~k~~~~~l~~~~-~~~~~~r~~~~~----~g~L~I~~v~~~D~~G 142 (167)
+...+.+..+.+|+++.|+|.+.+ .|.+.+.|++.+...+.... ....++|+.+.. ++.|.|++++.+|+ |
T Consensus 41 ~~~~p~~~~v~~G~~v~L~C~~~~---~~~~~i~W~~~~~~~i~~~~~~~~~~~r~~~~~~~~~~~~L~I~~v~~~Ds-G 116 (145)
T 1z9m_A 41 SQPWTSDETVVAGGTVVLKCQVKD---HEDSSLQWSNPAQQTLYFGEKRALRDNRIQLVTSTPHELSISISNVALADE-G 116 (145)
T ss_dssp TCCBCCCEEEETTSCEEEEEECSC---CTTCCEEEECTTCCEEEETTEECSCCTTEEEEEECSSEEEEEECSCCGGGC-E
T ss_pred eecCCceEEEEcCCCEEEEEEEcC---CCCcEEEEECCCCcEEEECCceecccCCEEEecCCCCeEEEEECCCChhhC-E
Confidence 344456778999999999999974 47788999965432221100 001245665543 45899999999999 9
Q ss_pred ceEEEeeecC--cceEEEee
Q psy12724 143 SYQCRTKHRL--TGETRLSA 160 (167)
Q Consensus 143 ~Y~C~a~n~~--~~~~~l~~ 160 (167)
.|+|.|.|.. +..+.|.+
T Consensus 117 ~Y~C~~~n~~~~~~~~~L~V 136 (145)
T 1z9m_A 117 EYTCSIFTMPVRTAKSLVTV 136 (145)
T ss_dssp EEEEEECSSSCEEEEEEEEE
T ss_pred EEEEEEEcCCCceEEEEEEE
Confidence 9999999972 23344444
No 313
>2yd1_A Tyrosine-protein phosphatase LAR; hydrolase; 1.80A {Drosophila melanogaster} PDB: 3pxj_A
Probab=99.20 E-value=7.1e-11 Score=88.25 Aligned_cols=75 Identities=24% Similarity=0.420 Sum_probs=59.2
Q ss_pred eEEEecCeEEEeCCcEEEEeeeCCccCCcceeEEEEeCCCeeeEEeeeecCCceEEEc--cCC--eEEEeecCc-CCCCc
Q psy12724 68 YTVNIMDEHVLKGNSAVLKCHIPSFVADYVAVESWISDQGEELFVDMTESTDGKYLVL--PSG--ELHIRDVGP-EDGYK 142 (167)
Q Consensus 68 y~c~~~~~~v~~G~~a~l~C~~~~~~~~p~p~i~W~k~~~~~l~~~~~~~~~~r~~~~--~~g--~L~I~~v~~-~D~~G 142 (167)
+.-.+.+..+.+|+++.|.|.+. +.|.|.++|+|++ ..+. ....|+.+. .+| .|.|.+++. +|+ |
T Consensus 9 ~~~~p~~~~v~~G~~v~l~C~~~---g~p~~~v~W~~~~-~~~~-----~~~~~~~~~~~~~~~~~L~i~~v~~~~d~-G 78 (212)
T 2yd1_A 9 IIRKPQNQGVRVGGVASFYCAAR---GDPPPSIVWRKNG-KKVS-----GTQSRYTVLEQPGGISILRIEPVRAGRDD-A 78 (212)
T ss_dssp EEECCCCEEEETTSCEEEEEEEE---CSSCCEEEEEETT-EECC-----TTSTTEEEEEETTTEEEEEESSCCTTTTC-S
T ss_pred EEcCCCceEEecCCEEEEEEEEc---cCCCCeEEEEECC-EECC-----CCcceeEEEEcCCCeEEEEEEecCCCCcC-c
Confidence 44455677899999999999997 4588899999997 4553 135566554 344 799999999 999 9
Q ss_pred ceEEEeeecC
Q psy12724 143 SYQCRTKHRL 152 (167)
Q Consensus 143 ~Y~C~a~n~~ 152 (167)
.|+|.|.|..
T Consensus 79 ~Y~C~~~n~~ 88 (212)
T 2yd1_A 79 PYECVAENGV 88 (212)
T ss_dssp EEEEEEECSS
T ss_pred eEEEEEEeCC
Confidence 9999999976
No 314
>1epf_A NCAM, protein (neural cell adhesion molecule); immunoglobulin fold, glycoprotein; 1.85A {Rattus norvegicus} SCOP: b.1.1.4 b.1.1.4 PDB: 2ncm_A 3ncm_A
Probab=99.20 E-value=1.1e-10 Score=85.22 Aligned_cols=76 Identities=20% Similarity=0.280 Sum_probs=58.8
Q ss_pred eEEEecCeEEEeCCcEEEEeeeCCccCCcceeEEEEe-CCCeeeEEeeeecCCceEEEc----cCCeEEEeecCcCCCCc
Q psy12724 68 YTVNIMDEHVLKGNSAVLKCHIPSFVADYVAVESWIS-DQGEELFVDMTESTDGKYLVL----PSGELHIRDVGPEDGYK 142 (167)
Q Consensus 68 y~c~~~~~~v~~G~~a~l~C~~~~~~~~p~p~i~W~k-~~~~~l~~~~~~~~~~r~~~~----~~g~L~I~~v~~~D~~G 142 (167)
+...+.+..+.+|+++.|.|.+.+. .|.+.++|+| ++ ..+.. ...++.+. .++.|.|.+++.+|+ |
T Consensus 5 v~~~p~~~~v~~G~~v~l~C~~~~~--~~~~~v~W~~~~g-~~~~~-----~~~~~~~~~~~~~~~~L~i~~~~~~d~-G 75 (191)
T 1epf_A 5 VDIVPSQGEISVGESKFFLCQVAGD--AKDKDISWFSPNG-EKLSP-----NQQRISVVWNDDDSSTLTIYNANIDDA-G 75 (191)
T ss_dssp EEEESSSEEEETTCCEEEEEEECCC--SCCCEEEEECTTS-CEECC-----BSSSEEEEEEETTEEEEEECSCCGGGC-E
T ss_pred EEecCCCcEEcCCCCEEEEEECCCC--CCCceEEEEeCCC-ccccC-----CCCeEEEEECCCCceEEEEccCCcccC-E
Confidence 3445567889999999999999853 2378999999 55 55532 34566654 346899999999999 9
Q ss_pred ceEEEeeecC
Q psy12724 143 SYQCRTKHRL 152 (167)
Q Consensus 143 ~Y~C~a~n~~ 152 (167)
.|+|.|.|..
T Consensus 76 ~Y~C~~~~~~ 85 (191)
T 1epf_A 76 IYKCVVTAED 85 (191)
T ss_dssp EEEEEEEETT
T ss_pred EEEEEEEcCC
Confidence 9999999986
No 315
>1igy_B IGG1 intact antibody MAB61.1.3; intact immunoglobulin, V region, C region, hinge region, immunoglobulin; HET: NAG FUL NDG BMA MAN GAL FUC; 3.20A {Mus musculus} SCOP: b.1.1.1 b.1.1.2 b.1.1.2 b.1.1.2
Probab=99.20 E-value=1e-11 Score=102.75 Aligned_cols=131 Identities=11% Similarity=0.181 Sum_probs=85.7
Q ss_pred eEEeEEEEEeCCcEEEEeecCCCCCCcceeeEEeeCC-Ccee---ee---c----------CCc------------eE--
Q psy12724 15 AQVYDVFVIKGNAAVFKCNLPSFVSDHLDVVSWADTD-GGQY---QI---D----------NQD------------FV-- 63 (167)
Q Consensus 15 ~~~~~~~v~~G~~~~l~C~a~~~~~~~~~~i~W~k~~-~~~~---~~---~----------~~~------------~v-- 63 (167)
.++..+.|.+|+++.|.|.+.+.+.+ .+.+.|+|++ +..+ .. + ..| .+
T Consensus 4 ~~~~~~~v~~G~~v~L~C~~~~~~~~-~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~~L~I 82 (434)
T 1igy_B 4 QESGAELARPGASVKMSCKASGYTFT-TYTIHWIKQRPGQGLEWIGYINPSSVYTNYNQRFKDKATLTRDRSSNTANIHL 82 (434)
T ss_dssp ECCCCCEECTBCCEEECCEECSSCGG-GCCCEEEEECTTCCEEEEEECCSSSCCCCCCGGGTTTEECCBCGGGCBBCEEE
T ss_pred ECCCCeEecCCCCEEEEEEccCCccc-CceEEEEEECCCCCCEEEEEEccCCCceecCccccccEEEEEECCCCEEEEEE
Confidence 34567889999999999999876421 2469999864 2211 00 0 001 11
Q ss_pred ------EEeeeEEEecCe-----------------------------EEEeCCcEEEEeeeCCccCCcce-eEEEEeCCC
Q psy12724 64 ------VSQSYTVNIMDE-----------------------------HVLKGNSAVLKCHIPSFVADYVA-VESWISDQG 107 (167)
Q Consensus 64 ------~~g~y~c~~~~~-----------------------------~v~~G~~a~l~C~~~~~~~~p~p-~i~W~k~~~ 107 (167)
.+|.|.|.+.+. .+.+|+++.|.|.+.+. .|.| .++|+|++.
T Consensus 83 ~~v~~~D~G~Y~C~~~~~~~~~~~~~~l~V~~~~~~~P~i~~~~~~~~~~~G~~v~L~C~~~g~--~P~p~~v~W~k~~~ 160 (434)
T 1igy_B 83 SSLTSDDSAVYYCVREGEVPYWGQGTTVTVSSAKTTPPSVYPLAPGSAAQTNSMVTLGCLVKGY--FPEPVTVTWNSGSL 160 (434)
T ss_dssp CSBCGGGCSEECCCCSSSSCCCCCCEECEECCSCCBCCCEEEECCCCCCCCTTEEEEEEEEEEE--BSSCCEEEETTTTB
T ss_pred CCCChHHCEEEEEEEEccccccCCceEEEEccCCCCCCeEEEcCCccccCCCCcEEEEEEEeee--cCCCeEEEEeeCCc
Confidence 279999987430 11368999999999753 2666 899999973
Q ss_pred eeeE-Eee-eecCCceEEEccCCeEEEeecCcCCCCcceEEEeeecCc
Q psy12724 108 EELF-VDM-TESTDGKYLVLPSGELHIRDVGPEDGYKSYQCRTKHRLT 153 (167)
Q Consensus 108 ~~l~-~~~-~~~~~~r~~~~~~g~L~I~~v~~~D~~G~Y~C~a~n~~~ 153 (167)
.+. ... .....++|.. .+.|.|.+++.+| |.|+|.|.|...
T Consensus 161 -~~~~~~~~~~~~~~~~~~--~s~L~i~~~~~~d--g~Y~C~a~n~~~ 203 (434)
T 1igy_B 161 -SSGVHTFPAVLQSDLYTL--SSSVTVPSSPRPS--ETVTCNVAHPAS 203 (434)
T ss_dssp -CSSEEECCCEECSSCEEE--EEEEEEETTTTTS--SCCEEEEECTTT
T ss_pred -CCCeEecCceecCCcEEE--EEEEEEcchhcCC--CcEEEEEEeCCC
Confidence 321 000 0001244543 2579999999988 999999999873
No 316
>2if7_A SLAM family member 6; NTB-A, homophilic receptor, immune system; 3.00A {Homo sapiens}
Probab=99.20 E-value=9.6e-11 Score=87.21 Aligned_cols=76 Identities=17% Similarity=0.278 Sum_probs=56.4
Q ss_pred cCeEEEeCCcEEEEeeeCCccCCcceeEEEEeCCCeeeEEeee------------ecCCceEEEccCCeEEEeecCcCCC
Q psy12724 73 MDEHVLKGNSAVLKCHIPSFVADYVAVESWISDQGEELFVDMT------------ESTDGKYLVLPSGELHIRDVGPEDG 140 (167)
Q Consensus 73 ~~~~v~~G~~a~l~C~~~~~~~~p~p~i~W~k~~~~~l~~~~~------------~~~~~r~~~~~~g~L~I~~v~~~D~ 140 (167)
....+.+|++|.|+|.+.+ +.+.+.|.|+|++ ..+..... +...+|+.+..++.|.|++++.+|+
T Consensus 6 ~~v~~~~G~~v~L~C~~~~--~~~~~~v~W~~~~-~~i~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~sL~I~~v~~~D~ 82 (193)
T 2if7_A 6 LMVNGILGESVTLPLEFPA--GEKVNFITWLFNE-TSLAFIVPHETKSPEIHVTNPKQGKRLNFTQSYSLQLSNLKMEDT 82 (193)
T ss_dssp EEEEEETTSCEEECCCCCC--CSCCCEEEEEETT-EEEEEEECCSSSCCEEEECCHHHHTTEEECTTCCEEECSCCGGGC
T ss_pred eEEEEEecCeEEEeccCCC--cccccEEEEEECC-EEEEEEecccCCCCceeecCccccccEEECCCeEEEECCCCcccC
Confidence 3467889999999999864 2356789999986 44321000 0001467777789999999999999
Q ss_pred CcceEEEeeecC
Q psy12724 141 YKSYQCRTKHRL 152 (167)
Q Consensus 141 ~G~Y~C~a~n~~ 152 (167)
|.|+|.|.|..
T Consensus 83 -G~Y~C~~~~~~ 93 (193)
T 2if7_A 83 -GSYRAQISTKT 93 (193)
T ss_dssp -EEEEEEEECSS
T ss_pred -ceEEEEEEecC
Confidence 99999999876
No 317
>1ncn_A T lymphocyte activation antigen CD86; IG V, beta strands, immune system; 2.70A {Homo sapiens} SCOP: b.1.1.1 PDB: 1i85_A
Probab=99.20 E-value=1.1e-10 Score=79.18 Aligned_cols=76 Identities=18% Similarity=0.204 Sum_probs=51.6
Q ss_pred eEEEeCCcEEEEeeeCCccCCcc---eeEEEEeCCCeeeEEeee---------ecCCceEEEc-cCCeEEEeecCcCCCC
Q psy12724 75 EHVLKGNSAVLKCHIPSFVADYV---AVESWISDQGEELFVDMT---------ESTDGKYLVL-PSGELHIRDVGPEDGY 141 (167)
Q Consensus 75 ~~v~~G~~a~l~C~~~~~~~~p~---p~i~W~k~~~~~l~~~~~---------~~~~~r~~~~-~~g~L~I~~v~~~D~~ 141 (167)
..+.+|++|.|+|.+.+. ..+. ..+.|+|++...+..... +.-.+|.... .++.|.|++++.+|+
T Consensus 4 v~~~~G~~v~L~C~~~~~-~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~sL~I~~v~~~D~- 81 (110)
T 1ncn_A 4 IQAYFNETADLPCQFANS-QNQSLSELVVFWQDQENLVLNEVYLGKEKFDSVHSKYMGRTSFDSDSWTLRLHNLQIKDK- 81 (110)
T ss_dssp EEEETTSCEEEECCCCCT-TCCCGGGEEEEEEETTCCEEEEEETTEECCSSBCTTTTTSEEEETTTTEEEECSCCGGGC-
T ss_pred EEEEeCCCEEEEeEeCCC-CcCCCccEEEEEEeCCCccEEEEECCcccccccCcccCCcEEEECCCEEEEEcCCChHHC-
Confidence 467899999999998632 1111 248999986322321110 0112456544 457899999999999
Q ss_pred cceEEEeeecC
Q psy12724 142 KSYQCRTKHRL 152 (167)
Q Consensus 142 G~Y~C~a~n~~ 152 (167)
|.|.|.+.|..
T Consensus 82 G~Y~C~v~~~~ 92 (110)
T 1ncn_A 82 GLYQCIIHHKK 92 (110)
T ss_dssp EEEEEEEEEEC
T ss_pred EEEEEEEEcCC
Confidence 99999999876
No 318
>2iep_A Muscle-specific kinase receptor; beta-sandwich, signaling protein,transferase; 2.21A {Rattus norvegicus}
Probab=99.20 E-value=3.3e-11 Score=88.06 Aligned_cols=70 Identities=21% Similarity=0.292 Sum_probs=56.9
Q ss_pred cCeEEEeCCcEEEEeeeCCccCCcceeEEEEeCCCeeeEEeeeecCCceEEEccCC-eEEEeecCcCCCCcceEEEeeec
Q psy12724 73 MDEHVLKGNSAVLKCHIPSFVADYVAVESWISDQGEELFVDMTESTDGKYLVLPSG-ELHIRDVGPEDGYKSYQCRTKHR 151 (167)
Q Consensus 73 ~~~~v~~G~~a~l~C~~~~~~~~p~p~i~W~k~~~~~l~~~~~~~~~~r~~~~~~g-~L~I~~v~~~D~~G~Y~C~a~n~ 151 (167)
.+..+.+|+++.|.|.+.+ .|.|.++|+|++ ..+. ....|+.+..++ .|.|.+++.+|+ |.|+|.+.|.
T Consensus 15 ~~~~~~~G~~v~l~C~~~~---~p~~~i~W~~~~-~~~~-----~~~~~~~~~~~~~~L~i~~~~~~d~-G~Y~C~~~~~ 84 (192)
T 2iep_A 15 ETVDALVEEVATFMCAVES---YPQPEISWTRNK-ILIK-----LFDTRYSIRENGQLLTILSVEDSDD-GIYCCTANNG 84 (192)
T ss_dssp CEEEEETTSCEEEECCEEE---ESCCEEEEEETT-EECC-----TTCTTEEEEGGGTEEEESSCCGGGC-EEEEEEEECS
T ss_pred cceeeeCCCcEEEEeeCCC---CCCCeEEEEECC-EEcc-----ccCccEEEcCCccEEEEcCCCcccC-eEEEEEEEcC
Confidence 4467889999999999974 488899999997 4543 235677776555 699999999999 9999999997
Q ss_pred C
Q psy12724 152 L 152 (167)
Q Consensus 152 ~ 152 (167)
.
T Consensus 85 ~ 85 (192)
T 2iep_A 85 V 85 (192)
T ss_dssp S
T ss_pred C
Confidence 5
No 319
>2yd6_A PTPRD protein; hydrolase; HET: FLC; 1.35A {Homo sapiens} PDB: 2yd7_A 2yd2_A 2yd3_A 2yd4_A* 2yd8_A* 2yd5_A* 3pxh_A
Probab=99.19 E-value=9e-11 Score=87.79 Aligned_cols=76 Identities=17% Similarity=0.320 Sum_probs=56.6
Q ss_pred eeEEEecCeEEEeCCcEEEEeeeCCccCCcceeEEEEeCCCeeeEEeeeecCCceEEEcc---CCeEEEeecC-cCCCCc
Q psy12724 67 SYTVNIMDEHVLKGNSAVLKCHIPSFVADYVAVESWISDQGEELFVDMTESTDGKYLVLP---SGELHIRDVG-PEDGYK 142 (167)
Q Consensus 67 ~y~c~~~~~~v~~G~~a~l~C~~~~~~~~p~p~i~W~k~~~~~l~~~~~~~~~~r~~~~~---~g~L~I~~v~-~~D~~G 142 (167)
.+.-.+.+..+.+|+++.|.|.+.+ .|.|.++|+|++ ..+.. ...+..... +..|.|.+++ .+|+ |
T Consensus 8 ~~~~~p~~~~v~~G~~v~L~C~~~g---~p~~~v~W~k~~-~~~~~-----~~~~~~~~~~~~~~~L~i~~v~~~~d~-G 77 (212)
T 2yd6_A 8 RFTRTPVDQTGVSGGVASFICQATG---DPRPKIVWNKKG-KKVSN-----QRFEVIEFDDGSGSVLRIQPLRTPRDE-A 77 (212)
T ss_dssp EEEECCCCEEEETTSCEEEEEEEEE---ESCCEEEEEETT-EECCC-----TTEEEEEEGGGTEEEEEECSCCTTTTC-E
T ss_pred eEEeCcceeEEecCCeEEEEEEEee---CCCCEEEEEECC-cCCCC-----CceeEEEEcCCCceEEEEeccCCCCCC-e
Confidence 3555567788999999999999974 488999999997 45431 111222222 2369999995 9999 9
Q ss_pred ceEEEeeecC
Q psy12724 143 SYQCRTKHRL 152 (167)
Q Consensus 143 ~Y~C~a~n~~ 152 (167)
.|+|.|.|..
T Consensus 78 ~Y~C~a~n~~ 87 (212)
T 2yd6_A 78 IYECVASNNV 87 (212)
T ss_dssp EEEEEEEETT
T ss_pred EEEEEEEcCC
Confidence 9999999986
No 320
>2v44_A NCAM2, neural cell adhesion molecule 2; phosphorylation, immunoglobulin domain, IG, membrane, homphilic, glycoprotein, transmembrane; 1.77A {Homo sapiens} PDB: 2xy2_A* 2vaj_A
Probab=99.19 E-value=6.1e-11 Score=86.69 Aligned_cols=73 Identities=22% Similarity=0.438 Sum_probs=57.6
Q ss_pred EEEecCeEEEeCCcEEEEeeeCCccCCcceeEEEEeCCCeeeEEeeeecCCceEEEccCC---eEEEeecCcCCCCcceE
Q psy12724 69 TVNIMDEHVLKGNSAVLKCHIPSFVADYVAVESWISDQGEELFVDMTESTDGKYLVLPSG---ELHIRDVGPEDGYKSYQ 145 (167)
Q Consensus 69 ~c~~~~~~v~~G~~a~l~C~~~~~~~~p~p~i~W~k~~~~~l~~~~~~~~~~r~~~~~~g---~L~I~~v~~~D~~G~Y~ 145 (167)
...+.+..+.+|+++.|.|.+.+ .|. .++|+|+++..+. ..+|+.+..+| .|.|.+++.+|+ |.|+
T Consensus 6 ~~~~~~~~v~~G~~v~L~C~~~~---~p~-~v~W~~~~~~~~~------~~~~~~~~~~~~~~~L~i~~~~~~d~-G~Y~ 74 (189)
T 2v44_A 6 TISLSKVELSVGESKFFTCTAIG---EPE-SIDWYNPQGEKII------STQRVVVQKEGVRSRLTIYNANIEDA-GIYR 74 (189)
T ss_dssp EESCSEEEEETTCCEEEEEEEEE---CCS-EEEEECTTSCBCC------CCSSEEEEEETTEEEEEECSCCGGGC-EEEE
T ss_pred EecCCceEEecCCcEEEEEEeec---CCe-eEEEEeCCCCccC------CCceEEEECCCCeEEEEEccCCcccC-eEEE
Confidence 34455678899999999999974 466 7899994444543 35677766655 899999999999 9999
Q ss_pred EEeeecC
Q psy12724 146 CRTKHRL 152 (167)
Q Consensus 146 C~a~n~~ 152 (167)
|.|.|..
T Consensus 75 C~~~~~~ 81 (189)
T 2v44_A 75 CQATDAK 81 (189)
T ss_dssp EEEECTT
T ss_pred EEEEeCC
Confidence 9999975
No 321
>2c5d_C AXL oncogene, tyrosine-protein kinase receptor UFO; signaling protein/receptor, growth regulation/complex, vitamin K-dependent protein; HET: NAG; 3.3A {Homo sapiens}
Probab=99.19 E-value=2.5e-11 Score=89.30 Aligned_cols=76 Identities=18% Similarity=0.250 Sum_probs=57.5
Q ss_pred eEEEecCeEEEeCCcEEEEeeeC-CccCCcceeEEEEeCCCeeeEEeeeecCCceEEE--cc--------CCeEEEeecC
Q psy12724 68 YTVNIMDEHVLKGNSAVLKCHIP-SFVADYVAVESWISDQGEELFVDMTESTDGKYLV--LP--------SGELHIRDVG 136 (167)
Q Consensus 68 y~c~~~~~~v~~G~~a~l~C~~~-~~~~~p~p~i~W~k~~~~~l~~~~~~~~~~r~~~--~~--------~g~L~I~~v~ 136 (167)
|.-.+.+..+.+|+++.|.|.+. + .|.|.++|+||+ ..+... ...++.+ .. ++.|.|.+++
T Consensus 5 ~~~~p~~~~v~~G~~v~l~C~~~~~---~p~~~v~W~~~g-~~l~~~----~~~~~~~~~~~~~~~~~~~~~~L~i~~~~ 76 (195)
T 2c5d_C 5 FVGNPGNITGARGLTGTLRCQLQVQ---GEPPEVHWLRDG-QILELA----DSTQTQVPLGEDEQDDWIVVSQLRITSLQ 76 (195)
T ss_dssp EEECCCCEEECTTCCEEEEEEEEEE---SSCCCCEEEETT-EECCSC----EEEEEEEECSSSTTSEEEEEEEEEESSCC
T ss_pred eccChhheEEecCCcEEEecccccC---CCCcEEEEEECC-EEcccC----CCCceEEEEccccccceeeccEEEEEecc
Confidence 45556778899999999999997 4 488899999997 555321 1123322 23 3579999999
Q ss_pred cCCCCcceEEEeeecC
Q psy12724 137 PEDGYKSYQCRTKHRL 152 (167)
Q Consensus 137 ~~D~~G~Y~C~a~n~~ 152 (167)
.+|+ |.|+|.|.|..
T Consensus 77 ~~d~-G~Y~C~~~~~~ 91 (195)
T 2c5d_C 77 LSDT-GQYQCLVFLGH 91 (195)
T ss_dssp STTC-EEEEEEEEETT
T ss_pred ccCC-cEEEEEEEeCC
Confidence 9999 99999999975
No 322
>1oga_E TRBC1, T-cell receptor beta chain C region; immune system/receptor, immune system/receptor/complex, TCR, MHC, immunodominance, FLU, complex; 1.40A {Homo sapiens} SCOP: b.1.1.1 b.1.1.2 PDB: 2vlm_E 2vlk_E 2vlj_E 2vlr_E 2xna_B 2xn9_B 2axh_A 2axj_A 3scm_D* 3sda_D* 3sdc_D* 3sdd_D* 3qi9_D* 3mff_B* 2ak4_E 3he7_D* 2eyr_B 3pqy_E 3kxf_E 2cde_B ...
Probab=99.19 E-value=1.1e-10 Score=90.23 Aligned_cols=131 Identities=15% Similarity=0.229 Sum_probs=81.7
Q ss_pred ceeeEEeEEEEEeCCcEEEEeecCCCCCCcceeeEEeeCC-Cc--e-eee--c---------CCc-----------eE--
Q psy12724 12 YYEAQVYDVFVIKGNAAVFKCNLPSFVSDHLDVVSWADTD-GG--Q-YQI--D---------NQD-----------FV-- 63 (167)
Q Consensus 12 ~~~~~~~~~~v~~G~~~~l~C~a~~~~~~~~~~i~W~k~~-~~--~-~~~--~---------~~~-----------~v-- 63 (167)
.+...|.++.+.+|+++.|.|.+.. + .+.+.|+|++ +. . +.. + ..| .+
T Consensus 5 ~v~q~p~~v~v~~G~~v~L~C~~~~-~---~~~v~W~r~~~~~~~~~l~~~~~~~~~~~~~~~~R~~~~~~~~~~~~L~I 80 (252)
T 1oga_E 5 GITQSPKYLFRKEGQNVTLSCEQNL-N---HDAMYWYRQDPGQGLRLIYYSQIVNDFQKGDIAEGYSVSREKKESFPLTV 80 (252)
T ss_dssp CEECSCSEEEEETTCCEEECCEECS-C---CSEEEEEEECTTCCEEEEEEESSTTCCEECSSCTTEEECCSSTTBCCEEE
T ss_pred cceEcCCeEEEcCCCcEEEEEEeCC-C---CCEEEEEEECCCCCeEEEEEEccCccccCCccCCcEEEEecCCCEEEEEE
Confidence 4556788899999999999999853 2 2479999863 11 1 100 0 001 11
Q ss_pred ------EEeeeEEEecCe---------------------------EEE--------eCCcEEEEeeeCCccCCcc-eeEE
Q psy12724 64 ------VSQSYTVNIMDE---------------------------HVL--------KGNSAVLKCHIPSFVADYV-AVES 101 (167)
Q Consensus 64 ------~~g~y~c~~~~~---------------------------~v~--------~G~~a~l~C~~~~~~~~p~-p~i~ 101 (167)
.+|.|.|.+.+. .+. +|+.+.|.|.+.+. .|. +.++
T Consensus 81 ~~v~~~D~G~Y~C~~~~~~~~~~~~~~~~~l~V~~~~~~~~~P~v~~~~~~~~~~~~g~~~~L~C~~~g~--~P~~~~v~ 158 (252)
T 1oga_E 81 TSAQKNPTAFYLCASSSRSSYEQYFGPGTRLTVTEDLKNVFPPEVAVFEPSEAEISHTQKATLVCLATGF--YPDHVELS 158 (252)
T ss_dssp CSCCSCCCEEEEEEEESSTTSCCEECCCEEEEEESCGGGCBCCEEEEECCCHHHHHHHSEEEEEEEEEEE--BSSCEEEE
T ss_pred CcCChhhCEEEEEEEecCCccceeECCCEEEEEecccCCCCCCeEEEECCChhhhccCCceEEEEEEeeE--cCCCcEEE
Confidence 279999976431 011 37899999999753 254 4899
Q ss_pred EEeCCCeeeEEeeee----------cCCceEEEccCCeEEEeecCcC-CCCcceEEEeeecC
Q psy12724 102 WISDQGEELFVDMTE----------STDGKYLVLPSGELHIRDVGPE-DGYKSYQCRTKHRL 152 (167)
Q Consensus 102 W~k~~~~~l~~~~~~----------~~~~r~~~~~~g~L~I~~v~~~-D~~G~Y~C~a~n~~ 152 (167)
|+||+ ..+.+.... ..++.|.+. ..|.|.....+ |. |.|+|.|.|..
T Consensus 159 W~~~g-~~l~~~~~~~~~~~~~~~~~~~gt~~~~--s~L~i~~~~~~d~~-~~ytC~v~~~~ 216 (252)
T 1oga_E 159 WWVNG-KEVHSGVSTDPQPLKEQPALNDSRYSLS--SRLRVSATFWQNPR-NHFRCQVQFYG 216 (252)
T ss_dssp EEETT-EEECSSEEECSSCEESCTTSTTCCEEEE--EEEEEEHHHHTCTT-CEEEEEEEECC
T ss_pred EEECC-EECCCCcccccccccccccCCCCCEEEE--EEEEECHHHhccCC-CEEEEEEEcCC
Confidence 99987 555321000 011222221 24888887765 55 78999999975
No 323
>1bec_A 14.3.D T cell antigen receptor; T cell receptor; 1.70A {Mus musculus} SCOP: b.1.1.1 b.1.1.2 PDB: 1jck_A 1l0x_A 1sbb_A 1l0y_A 3c6l_B 1mwa_B* 1g6r_B* 1tcr_B* 2ckb_B 2q86_B* 1lp9_F 2j8u_F 2jcc_F 2uwe_F 3mbe_D* 1d9k_B* 2aq3_A 3mc0_A 3byt_A 3bzd_A ...
Probab=99.18 E-value=5.1e-11 Score=91.15 Aligned_cols=129 Identities=14% Similarity=0.207 Sum_probs=78.5
Q ss_pred eeEEeEEEEEeCCcEEEEeecCCCCCCcceeeEEeeCC-Cce---eee--c---------CCc-----------eE----
Q psy12724 14 EAQVYDVFVIKGNAAVFKCNLPSFVSDHLDVVSWADTD-GGQ---YQI--D---------NQD-----------FV---- 63 (167)
Q Consensus 14 ~~~~~~~~v~~G~~~~l~C~a~~~~~~~~~~i~W~k~~-~~~---~~~--~---------~~~-----------~v---- 63 (167)
...|.++.+.+|+++.|.|.+.. + .+.+.|+|++ +.. +.. + ..| .+
T Consensus 3 ~q~p~~v~v~~G~~v~L~C~~~~-~---~~~v~W~r~~~~~~~~~l~~~~~~~~~~~~~~~~R~~~~~~~~~~~~L~I~~ 78 (238)
T 1bec_A 3 TQSPRNKVAVTGGKVTLSCQQTN-N---HNNMYWYRQDTGHGLRLIHYSYGAGSTEKGDIPDGYKASRPSQEQFSLILEL 78 (238)
T ss_dssp EEECSEEEEETTCCEEEEEEESS-C---CSEEEEEEECTTSCEEEEEEEEETTEEEECSCCTTCEEECCSSSEEEEEESS
T ss_pred ccCCCeeEEeCCCcEEEEEEeCC-C---CceEEEEEECCCCCEEEEEEEeCCCcccCCCccceEEEEecCCCEEEEEEec
Confidence 45678899999999999999853 2 2579999864 211 100 0 011 11
Q ss_pred ----EEeeeEEEecCe---------------E------------E----------EeCCcEEEEeeeCCccCCcc-eeEE
Q psy12724 64 ----VSQSYTVNIMDE---------------H------------V----------LKGNSAVLKCHIPSFVADYV-AVES 101 (167)
Q Consensus 64 ----~~g~y~c~~~~~---------------~------------v----------~~G~~a~l~C~~~~~~~~p~-p~i~ 101 (167)
.+|.|.|.+.+. . + .+|+.+.|.|.+.+. .|. +.++
T Consensus 79 v~~~D~G~Y~C~~~~~~~~~~~~~~~~~~~l~V~~~~~~~~~P~v~~~~~~~~~~~~g~~~~L~C~~~g~--~P~~~~v~ 156 (238)
T 1bec_A 79 ATPSQTSVYFCASGGGRGSYAEQFFGPGTRLTVLEDLRQVTPPKVSLFEPSKAEIANKQKATLVCLARGF--FPDHVELS 156 (238)
T ss_dssp CCGGGCEEEEEEEESCTTCGGGCEECCCEEEEEESCGGGCBCCEEEEECCCSTTCSSSCSCSEEEEEEEE--BSCCEEEE
T ss_pred CCcccCEEEEEEEecCCCCccccccCCCEEEEEeccCCCCCCCceEEECCChHHcccCCceEEEEEEeeE--eCCCcEEE
Confidence 279999987431 0 1 148899999999753 254 4899
Q ss_pred EEeCCCeeeEEeeeecCCceEEEccCCe------EEEeecCcCC-CCcceEEEeeecC
Q psy12724 102 WISDQGEELFVDMTESTDGKYLVLPSGE------LHIRDVGPED-GYKSYQCRTKHRL 152 (167)
Q Consensus 102 W~k~~~~~l~~~~~~~~~~r~~~~~~g~------L~I~~v~~~D-~~G~Y~C~a~n~~ 152 (167)
|+||+ ..+.+... .........+|. |.|.....+| . |.|+|.|.|..
T Consensus 157 W~~~g-~~~~~~~~--~~~~~~~~~~g~~~~~s~L~i~~~~~~d~~-~~ytC~v~~~~ 210 (238)
T 1bec_A 157 WWVNG-KEVHSGVS--TDPQAYKESNYSYCLSSRLRVSATFWHNPR-NHFRCQVQFHG 210 (238)
T ss_dssp EEETT-EEECTTEE--ECSSCEEEETTEEEEEEEECCCHHHHTCTT-CEEEEEEEECC
T ss_pred EEECC-EECCCcee--cccceEeCCCCCEEEEEEEEEcHHHhccCC-CeEEEEEEcCC
Confidence 99987 45531100 000111123443 4555555555 5 67999999975
No 324
>3khq_A B-cell antigen receptor complex-associated protei chain; CD79B, CD79A, IG-beta, BCR, IG domain, V-SET, immunoglobulin protein binding; HET: FLC GSH; 1.70A {Mus musculus} PDB: 3kho_A*
Probab=99.18 E-value=5.4e-11 Score=84.55 Aligned_cols=83 Identities=17% Similarity=0.263 Sum_probs=59.6
Q ss_pred ecCeEEEeCCcEEEEeeeCCccCCcceeEEEEeCC-CeeeEEeeeecCCceEEEccCC---eEEEeecCcCCCCcceEEE
Q psy12724 72 IMDEHVLKGNSAVLKCHIPSFVADYVAVESWISDQ-GEELFVDMTESTDGKYLVLPSG---ELHIRDVGPEDGYKSYQCR 147 (167)
Q Consensus 72 ~~~~~v~~G~~a~l~C~~~~~~~~p~p~i~W~k~~-~~~l~~~~~~~~~~r~~~~~~g---~L~I~~v~~~D~~G~Y~C~ 147 (167)
+.+..+.+|++|.|.|.+.+ . +.+.|+|+. +..+.... ...+||.+..++ .|.|++++.+|+ |.|.|.
T Consensus 24 p~~~~v~~G~~v~L~C~~~~---~--~~v~W~r~~~g~~~~~l~--~~~~r~~~~~~~~~~~L~I~~~~~~Ds-G~Y~C~ 95 (133)
T 3khq_A 24 PRFAAKKRSSMVKFHCYTNH---S--GALTWFRKRGSQQPQELV--SEEGRIVQTQNGSVYTLTIQNIQYEDN-GIYFCK 95 (133)
T ss_dssp CSEEEECTTCCEEEEEEESS---S--SCEEEEEECTTSCCEECC--CTTTTEEEEEETTEEEEEECSCCGGGC-EEEEEE
T ss_pred CceEEEeCCCeEEEEEEeCC---C--CEEEEEEeCCCCCCEEEE--EeCCCEEEEcCCCEEEEEECCCChHHC-EEEEEE
Confidence 44567889999999999974 2 789999973 12211100 135788776555 599999999999 999999
Q ss_pred eeecC-------cceEEEeeeC
Q psy12724 148 TKHRL-------TGETRLSATK 162 (167)
Q Consensus 148 a~n~~-------~~~~~l~~~~ 162 (167)
|.|.. +..++|.+.+
T Consensus 96 a~n~~g~~~~~~g~gt~L~V~~ 117 (133)
T 3khq_A 96 QKCDSANHNVTDSCGTELLVLG 117 (133)
T ss_dssp ESSCC-------CCCEEEEEC-
T ss_pred EEeCCCCcceeECCCEEEEEEe
Confidence 99873 4556777644
No 325
>2xqy_G A13-D6.3 monoclonal antibody, envelope glycoprotein H; immune system-viral protein complex, envelope protein; HET: NAG; 2.05A {Mus musculus}
Probab=99.18 E-value=6.1e-11 Score=92.83 Aligned_cols=134 Identities=16% Similarity=0.216 Sum_probs=85.2
Q ss_pred eceeeEEeEEEEEeCCcEEEEeecCCCCCCcceeeEEeeCC-Ccee---e---e-c---------CCc------------
Q psy12724 11 QYYEAQVYDVFVIKGNAAVFKCNLPSFVSDHLDVVSWADTD-GGQY---Q---I-D---------NQD------------ 61 (167)
Q Consensus 11 ~~~~~~~~~~~v~~G~~~~l~C~a~~~~~~~~~~i~W~k~~-~~~~---~---~-~---------~~~------------ 61 (167)
+....++..+.+.+|+++.|.|.+.+.+.. .+.+.|+|++ +..+ . . + ..|
T Consensus 7 ~~~~~~p~~~~v~~G~~v~L~C~~~~~~~~-~~~v~W~r~~~g~~~~~l~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~ 85 (261)
T 2xqy_G 7 QVQLQQPGAELVKPGASVKMSCKASGYSFT-SYWMNWVKQRPGRGLEWIGRIDPSDNETHYNQDFKDKVTLTVDKSSSTV 85 (261)
T ss_dssp CCEEECCSEEEECTTCCEEEEEEEESSCGG-GSCEEEEEECTTSCEEEEEEECTTTCCEEECGGGTTTEEEEEEGGGTEE
T ss_pred ceeEECCCCEEEcCCCCEEEEEEeCCcccC-CceEEEEEeCCCCCcEEEEEEecCCCceeeCCccCCcEEEEecCCCCEE
Confidence 344456778899999999999999876521 2469999864 2211 0 0 0 011
Q ss_pred eE--------EEeeeEEEecCe-------------E-------------------EEeCCcEEEEeeeCCccCCcce-eE
Q psy12724 62 FV--------VSQSYTVNIMDE-------------H-------------------VLKGNSAVLKCHIPSFVADYVA-VE 100 (167)
Q Consensus 62 ~v--------~~g~y~c~~~~~-------------~-------------------v~~G~~a~l~C~~~~~~~~p~p-~i 100 (167)
.+ .+|.|.|.+.+. . +..|+++.|.|.+.+. .|.| .+
T Consensus 86 sL~I~~v~~~DsG~Y~C~~~~~~~~~~~~~~~~~L~V~~~~~~~P~v~~~~p~~~v~~g~~v~L~C~~~g~--~P~~i~v 163 (261)
T 2xqy_G 86 YIQLSSLTSEDSAVYYCGRLGYVYGFDYWGQGTTLTVSSAKTTAPSVYPLAPVCGDTTGSSVTLGCLVKGY--FPEPVTL 163 (261)
T ss_dssp EEEECSCCGGGCEEEEEEEECTTSSEEEECCCEEEEECSSCCBCCEEEEECCCCC--CCSEEEEEEEEEEE--BSSCCEE
T ss_pred EEEEcCCCcccCeEEEEEEecCCCcceEECCCEEEEEccCCCCCCeEEEeCCCccccCCCcEEEEEEEEeE--eCCCCEE
Confidence 11 169999987430 0 1248899999999753 3666 89
Q ss_pred EEEeCCCeeeEEeeee--cCCceEEEccCCeEEEeecCcCCCCcceEEEeeecC
Q psy12724 101 SWISDQGEELFVDMTE--STDGKYLVLPSGELHIRDVGPEDGYKSYQCRTKHRL 152 (167)
Q Consensus 101 ~W~k~~~~~l~~~~~~--~~~~r~~~~~~g~L~I~~v~~~D~~G~Y~C~a~n~~ 152 (167)
+|+|++ ..+...... ...+.|.. .+.|.|.++..+| |.|+|.|.|..
T Consensus 164 ~W~k~g-~~~~~~~~~~~~~~g~~~~--~s~L~i~~~~~~~--g~YtC~v~n~~ 212 (261)
T 2xqy_G 164 TWNSGS-LSSGVHTFPAVLQSDLYTL--SSSVTVTSSTWPS--QSITCNVAHPA 212 (261)
T ss_dssp EEGGGT-CCTTEEECCCEEETTEEEE--EEEEEEETTTTTT--SCCEEEEEEGG
T ss_pred EEecCC-CcCceEecCceecCCcEEE--EEEEEEeccccCC--CEEEEEEEECC
Confidence 999987 333110000 01144443 3579999888855 99999999976
No 326
>2v5y_A Receptor-type tyrosine-protein phosphatase MU; membrane, hydrolase, glycoprotein, receptor protei tyrosine phosphatase, cell adhesion; HET: NAG; 3.10A {Homo sapiens}
Probab=99.18 E-value=1.9e-10 Score=101.40 Aligned_cols=113 Identities=13% Similarity=0.200 Sum_probs=75.0
Q ss_pred CcEEEEeecCCCCCCcceeeEEeeCCCceee-------ec---CCce-E----E----EeeeEE----------E-----
Q psy12724 26 NAAVFKCNLPSFVSDHLDVVSWADTDGGQYQ-------ID---NQDF-V----V----SQSYTV----------N----- 71 (167)
Q Consensus 26 ~~~~l~C~a~~~~~~~~~~i~W~k~~~~~~~-------~~---~~~~-v----~----~g~y~c----------~----- 71 (167)
.++.+.|.+.+.|. |.|.|.|++.+... .. ...+ + + .|.|.| .
T Consensus 92 g~l~v~c~~~g~P~---p~i~W~k~g~~~~~~~~~~~~i~~~~~~~~~l~~~~va~~~~G~~~~~~v~~~~~~~~~~p~~ 168 (731)
T 2v5y_A 92 GLLNVYVKVNNGPL---GNPIWNISGDPTRTWNRAELAISTFWPNFYQVIFEVITSGHQGYLAIDEVKVLGHPCTRTPHF 168 (731)
T ss_dssp EEEEEEEEETTCCC---CSEEEEECCCCCSSCEEEEEEECCCTTSCEEEEEEEEECSSCCEEEECCBEEESSCCSSSCEE
T ss_pred ceEEEEEecCCCCc---cceeEEEeCCcCCceeEEEEEEeecCCCceEEEEEEEecCCceEEEEeeEEeeeccccccccc
Confidence 47889999998875 47999999753210 01 0110 0 0 232222 1
Q ss_pred --ecCeEEEeCCcEEEEeeeCCccCCcceeEE-EE--eCCCeeeEEeeeecCCceEEEcc---CCeEEEeecCcCCCCcc
Q psy12724 72 --IMDEHVLKGNSAVLKCHIPSFVADYVAVES-WI--SDQGEELFVDMTESTDGKYLVLP---SGELHIRDVGPEDGYKS 143 (167)
Q Consensus 72 --~~~~~v~~G~~a~l~C~~~~~~~~p~p~i~-W~--k~~~~~l~~~~~~~~~~r~~~~~---~g~L~I~~v~~~D~~G~ 143 (167)
+.+..+.+|+++.|.|.+. |+|.|.+. |+ +|+ ..+... ....+.. .+.|.|.+++.+|+ |.
T Consensus 169 ~~~~~~~v~~G~~v~l~C~~~---g~P~p~i~~W~~~~~g-~~l~~~------~~~~~~~~~~~~~l~I~~~~~~d~-g~ 237 (731)
T 2v5y_A 169 LRIQNVEVNAGQFATFQCSAI---GRTVAGDRLWLQGIDV-RDAPLK------EIKVTSSRRFIASFNVVNTTKRDA-GK 237 (731)
T ss_dssp CCCCCEEEETTSCEEEEEEEE---SCCCTTCEEEEEESSS-CCEEEE------EEEECCSSEEEEEEEECSCCTTTC-EE
T ss_pred ccccceEEeCCCcEEEEEEeC---CCCCCceeEEEecCCC-cccccc------ceEEeccccceEEEEEcccccccC-eE
Confidence 1356788999999999998 45888887 88 565 455321 1111111 36899999999998 99
Q ss_pred eEEEeeecC
Q psy12724 144 YQCRTKHRL 152 (167)
Q Consensus 144 Y~C~a~n~~ 152 (167)
|+|.|.|..
T Consensus 238 Y~c~A~n~~ 246 (731)
T 2v5y_A 238 YRCMIRTEG 246 (731)
T ss_dssp EEEEEEETT
T ss_pred EEEEEECCC
Confidence 999999986
No 327
>2a38_A Titin; Z1Z2, structural protein; 2.00A {Homo sapiens} PDB: 1ya5_A 2f8v_A
Probab=99.18 E-value=8.5e-11 Score=85.97 Aligned_cols=76 Identities=22% Similarity=0.335 Sum_probs=56.4
Q ss_pred eEEEecCeEEEeCCcEEEEeeeCCccCCcceeEEEEeCCCeeeEEeeeecCCceEEE-ccCC--eEEEeecCcCCCCcce
Q psy12724 68 YTVNIMDEHVLKGNSAVLKCHIPSFVADYVAVESWISDQGEELFVDMTESTDGKYLV-LPSG--ELHIRDVGPEDGYKSY 144 (167)
Q Consensus 68 y~c~~~~~~v~~G~~a~l~C~~~~~~~~p~p~i~W~k~~~~~l~~~~~~~~~~r~~~-~~~g--~L~I~~v~~~D~~G~Y 144 (167)
+.-.+.+..+.+|+++.|.|.+.+ .|.|.++|+|++ ..+... ...++.+ ..++ .|.|.+++.+|+ |.|
T Consensus 8 ~~~~~~~~~v~~G~~v~l~C~~~~---~p~~~v~W~~~~-~~~~~~----~~~~~~~~~~~~~~~L~i~~~~~~d~-G~Y 78 (194)
T 2a38_A 8 FTQPLQSVVVLEGSTATFEAHISG---FPVPEVSWFRDG-QVISTS----TLPGVQISFSDGRAKLTIPAVTKANS-GRY 78 (194)
T ss_dssp EEECCCCEEEETTSCEEEEEEEEE---ESCCEEEEEESS-SBCCTT----TSTTCEEEEETTEEEEEESSCCGGGC-EEE
T ss_pred EEccCCceEEECCCEEEEEEEEEe---cCCCEEEEEECC-EEcccc----cCCceEEEeCCCEEEEEECCCCcccC-EEE
Confidence 344456678899999999999974 488899999997 454321 1122322 2333 799999999999 999
Q ss_pred EEEeeecC
Q psy12724 145 QCRTKHRL 152 (167)
Q Consensus 145 ~C~a~n~~ 152 (167)
+|.|.|..
T Consensus 79 ~C~~~n~~ 86 (194)
T 2a38_A 79 SLKATNGS 86 (194)
T ss_dssp EEEEEETT
T ss_pred EEEEEcCC
Confidence 99999876
No 328
>3udw_C Poliovirus receptor; PVR tigit IGSF signal transduction immunology, IGSF, cell SU receptor signalling, glycosylation, membrane protein; HET: NAG; 2.90A {Homo sapiens}
Probab=99.17 E-value=1.2e-10 Score=79.12 Aligned_cols=84 Identities=15% Similarity=0.217 Sum_probs=55.0
Q ss_pred CeEEEeCCcEEEEeeeCCccCCcce----eEEEEeCCCee-eEEee-----eecCCceEEEcc--------CCeEEEeec
Q psy12724 74 DEHVLKGNSAVLKCHIPSFVADYVA----VESWISDQGEE-LFVDM-----TESTDGKYLVLP--------SGELHIRDV 135 (167)
Q Consensus 74 ~~~v~~G~~a~l~C~~~~~~~~p~p----~i~W~k~~~~~-l~~~~-----~~~~~~r~~~~~--------~g~L~I~~v 135 (167)
+..+.+|++|.|+|.+.. +.+.+ .+.|+|++... +.... .....+|+.+.. ++.|.|+++
T Consensus 9 ~v~~~~G~~v~L~C~~~~--~~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~sL~I~~v 86 (118)
T 3udw_C 9 QVPGFLGDSVTLPCYLQV--PNMEVTHVSQLTWARHGESGSMAVFHQTQGPSYSESKRLEFVAARLGAELRNASLRMFGL 86 (118)
T ss_dssp EEEEETTSCEEECCEEEC--CTTCCCEEEEEEEEETTCSBCSEEEETTTEEEETTCSSEEETTCCTTSCCCBCCEEECSC
T ss_pred eEEEeeCCcEEEEEEeEC--CCCCCCceEEEEEEEcCCCceEEEEeCCCCCccCCcCcEEEecccccCCCCCcEEEEeec
Confidence 356789999999999832 22322 48999985221 11000 001245676665 568999999
Q ss_pred CcCCCCcceEEEeee-cC---cceEEEee
Q psy12724 136 GPEDGYKSYQCRTKH-RL---TGETRLSA 160 (167)
Q Consensus 136 ~~~D~~G~Y~C~a~n-~~---~~~~~l~~ 160 (167)
+.+|+ |.|.|.+.| .. ...+.|.+
T Consensus 87 ~~~D~-G~Y~C~v~~~~~~~~~~~~~L~V 114 (118)
T 3udw_C 87 RVEDE-GNYTCLFVTFPQGSRSVDIWLRV 114 (118)
T ss_dssp CGGGC-EEEEEEEEEETTEEEEEEEEEEE
T ss_pred ChHHC-eEEEEEEEECCCCCccceEEEEE
Confidence 99999 999999998 32 34445544
No 329
>3nl4_L Antigen binding fragment, immunoglobulin IGG - LI; FAB, rabbit, conformation-specific, amyloid, immune system; 1.54A {Oryctolagus cuniculus} PDB: 4hbc_L
Probab=99.17 E-value=1.1e-10 Score=86.95 Aligned_cols=77 Identities=17% Similarity=0.309 Sum_probs=54.7
Q ss_pred ecCeEEEeCCcEEEEeeeCCccCCcceeEEEEeCC-CeeeEE-ee-----eecCCceEEEccCC---eEEEeecCcCCCC
Q psy12724 72 IMDEHVLKGNSAVLKCHIPSFVADYVAVESWISDQ-GEELFV-DM-----TESTDGKYLVLPSG---ELHIRDVGPEDGY 141 (167)
Q Consensus 72 ~~~~~v~~G~~a~l~C~~~~~~~~p~p~i~W~k~~-~~~l~~-~~-----~~~~~~r~~~~~~g---~L~I~~v~~~D~~ 141 (167)
+.+..+.+|++|.|+|.+.+ .|.|.+.|+|++ +..+.. .. .....+||.+..++ .|.|++++.+|+
T Consensus 8 p~~~~v~~G~~v~L~C~~~~---~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~D~- 83 (213)
T 3nl4_L 8 PASVSEPVGGTVTIKCQASQ---SISSYLAWYQQKPGQRPRLLIYETSTLASGVPSRFKGSGSGTDFTLTISDLECADA- 83 (213)
T ss_dssp CSEEEEETTCCEEEEEEESS---CCTTCEEEEEECTTSCCEEEEETTTEECTTCCTTEEEEEETTEEEEEECSCCGGGC-
T ss_pred CCeEEEcCCCCEEEEEEecC---CCCceEEEEEECCCCCcEEEEEeCCccCCCCCccEEEecCCCEEEEEECCCChHHC-
Confidence 34567889999999999985 478899999853 111111 00 00114677665433 799999999999
Q ss_pred cceEEEeeecC
Q psy12724 142 KSYQCRTKHRL 152 (167)
Q Consensus 142 G~Y~C~a~n~~ 152 (167)
|.|+|.|.|..
T Consensus 84 G~Y~C~~~~~~ 94 (213)
T 3nl4_L 84 ATYYCQSTYEN 94 (213)
T ss_dssp EEEEEEECCSS
T ss_pred EEEEEecCCCC
Confidence 99999999954
No 330
>2va4_A NCAM2, N-CAM 2, neural cell adhesion molecule 2; transmembrane, phosphorylation, immunoglobulin domain, membrane, glycoprotein; HET: NAG; 1.9A {Homo sapiens} PDB: 2xy1_A*
Probab=99.17 E-value=6.7e-11 Score=86.23 Aligned_cols=68 Identities=21% Similarity=0.475 Sum_probs=55.0
Q ss_pred CeEEEeCCcEEEEeeeCCccCCcceeEEEEeCCCeeeEEeeeecCCceEEEcc-CCeEEEeecCcCCCCcceEEEeeecC
Q psy12724 74 DEHVLKGNSAVLKCHIPSFVADYVAVESWISDQGEELFVDMTESTDGKYLVLP-SGELHIRDVGPEDGYKSYQCRTKHRL 152 (167)
Q Consensus 74 ~~~v~~G~~a~l~C~~~~~~~~p~p~i~W~k~~~~~l~~~~~~~~~~r~~~~~-~g~L~I~~v~~~D~~G~Y~C~a~n~~ 152 (167)
+..+.+|+++.|.|.+.+ .|.|.++|+|++ ..+. ...++.+.. ++.|.|.+++.+|+ |.|+|.+.|..
T Consensus 13 ~~~v~~G~~v~l~C~~~~---~p~~~v~W~~~~-~~~~------~~~~~~~~~~~~~L~i~~~~~~d~-G~Y~C~~~~~~ 81 (192)
T 2va4_A 13 NATAERGEEMTFSCRASG---SPEPAISWFRNG-KLIE------ENEKYILKGSNTELTVRNIINSDG-GPYVCRATNKA 81 (192)
T ss_dssp EEETTSCCCEEEECEEEC---SSCCEEEEEETT-EECC------CSSSEEEETTTTEEEECSCCGGGC-EEEEEEEEETT
T ss_pred EEEEecCCCEEEEEeecc---CCCCeEEEEECC-eEcC------CCccEEEeCCeeEEEEecCChhcC-cEEEEEEEccc
Confidence 356678999999999974 588899999997 4553 345666554 45799999999999 99999999976
No 331
>1rhf_A Tyrosine-protein kinase receptor TYRO3; AXL/TYRO3 family, cellular adhesion, ligand-independent DIME mutational analysis, transferase; HET: EPE; 1.96A {Homo sapiens} SCOP: b.1.1.1 b.1.1.4
Probab=99.16 E-value=7e-11 Score=85.85 Aligned_cols=79 Identities=16% Similarity=0.262 Sum_probs=58.3
Q ss_pred EecCeEEEeCCcEEEEeeeCCccCCcceeEEEEeCCCeeeEEeeeecCCceEEEcc-----CCeEEEeecCcCCCCcceE
Q psy12724 71 NIMDEHVLKGNSAVLKCHIPSFVADYVAVESWISDQGEELFVDMTESTDGKYLVLP-----SGELHIRDVGPEDGYKSYQ 145 (167)
Q Consensus 71 ~~~~~~v~~G~~a~l~C~~~~~~~~p~p~i~W~k~~~~~l~~~~~~~~~~r~~~~~-----~g~L~I~~v~~~D~~G~Y~ 145 (167)
.+.+..+.+|+++.|.|.+.+ .|.|.++|+|++ ..+. ...++.+.. ++.|.|.+++.+|+ |.|+
T Consensus 8 ~p~~~~v~~G~~v~l~C~~~~---~p~~~v~W~k~~-~~~~------~~~~~~~~~~~~~~~~~L~i~~~~~~d~-G~Y~ 76 (182)
T 1rhf_A 8 APVKLTVSQGQPVKLNCSVEG---MEEPDIQWVKDG-AVVQ------NLDQLYIPVSEQHWIGFLSLKSVERSDA-GRYW 76 (182)
T ss_dssp CCEEEEEETTCCEEEEEEEES---CSSCCEEEEETT-EECC------SSEEEEEEEETTEEEEEEEESSCCGGGC-EEEE
T ss_pred CCcceEEeCCCcEEEEEEEeC---CCCCeEEEEECC-eecC------CCCceEEEecCCCceEEEEEeecCcccC-eEEE
Confidence 345567889999999999984 588899999987 4543 223333322 25899999999999 9999
Q ss_pred EEeeecC----cceEEEee
Q psy12724 146 CRTKHRL----TGETRLSA 160 (167)
Q Consensus 146 C~a~n~~----~~~~~l~~ 160 (167)
|.|.|.. +..+.|.+
T Consensus 77 C~~~~~~~~~~~~~~~l~V 95 (182)
T 1rhf_A 77 CQVEDGGETEISQPVWLTV 95 (182)
T ss_dssp EEESSCTTCEECCCEEEEE
T ss_pred EEEEcCCCcEEEEEEEEEE
Confidence 9999974 33445544
No 332
>1pko_A Myelin oligodendrocyte glycoprotein; IGV-domain, immune system; 1.45A {Rattus norvegicus} SCOP: b.1.1.1 PDB: 1pkq_E 3csp_A 1py9_A
Probab=99.16 E-value=2.8e-10 Score=80.36 Aligned_cols=87 Identities=18% Similarity=0.223 Sum_probs=56.7
Q ss_pred CeEEEeCCcEEEEeeeCCccCCcceeEEEEeCCCe-eeEEee---------eecCCceEEEccC------CeEEEeecCc
Q psy12724 74 DEHVLKGNSAVLKCHIPSFVADYVAVESWISDQGE-ELFVDM---------TESTDGKYLVLPS------GELHIRDVGP 137 (167)
Q Consensus 74 ~~~v~~G~~a~l~C~~~~~~~~p~p~i~W~k~~~~-~l~~~~---------~~~~~~r~~~~~~------g~L~I~~v~~ 137 (167)
...+.+|++|+|+|.+.+......+.+.|+|++.. .+.-.. .+...+|+.+..+ ..|.|++++.
T Consensus 15 ~v~~~~G~~v~L~C~~~~~~~~~~~~v~W~~~~~~~~v~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~~sL~I~~v~~ 94 (139)
T 1pko_A 15 PIRALVGDEAELPCRISPGKNATGMEVGWYRSPFSRVVHLYRNGKDQDAEQAPEYRGRTELLKESIGEGKVALRIQNVRF 94 (139)
T ss_dssp CEEEETTSCEEEEEEEESCCCCTTSEEEEEEC--CCEEEEEETTEECGGGSCSTTTTSEEEECTTGGGTEEEEEESSCCG
T ss_pred CEEEEeCCCEEEeeEccCCCCCCceEEEEEECCCCceEEEEeCCcccccccCcccCCceEEccccccCCeEEEEEccCCH
Confidence 46788999999999986321112368999998631 121100 0011357766543 3799999999
Q ss_pred CCCCcceEEEeeecC---cceEEEeee
Q psy12724 138 EDGYKSYQCRTKHRL---TGETRLSAT 161 (167)
Q Consensus 138 ~D~~G~Y~C~a~n~~---~~~~~l~~~ 161 (167)
+|+ |.|.|.+.|.. ...+.|.+.
T Consensus 95 ~D~-G~Y~C~v~~~~~~~~~~~~L~V~ 120 (139)
T 1pko_A 95 SDE-GGYTCFFRDHSYQEEAAVELKVE 120 (139)
T ss_dssp GGC-EEEEEEEEETTEEEEEEEEEEEE
T ss_pred HHC-EEEEEEEEcCCCceEEEEEEEEe
Confidence 999 99999999976 344556553
No 333
>3s97_C Contactin-1; carbonic anhdyrase like immunoglobulin, cell adhesion comple adhesion; HET: NAG; 2.30A {Homo sapiens}
Probab=99.16 E-value=6.4e-11 Score=86.81 Aligned_cols=72 Identities=19% Similarity=0.325 Sum_probs=56.1
Q ss_pred cCeEEEeCCcEEEEee-eCCccCCcc-eeEEEEeCCCeeeEEeeeecCCceEEEccCCeEEEeecCcCCCCcceEEEeee
Q psy12724 73 MDEHVLKGNSAVLKCH-IPSFVADYV-AVESWISDQGEELFVDMTESTDGKYLVLPSGELHIRDVGPEDGYKSYQCRTKH 150 (167)
Q Consensus 73 ~~~~v~~G~~a~l~C~-~~~~~~~p~-p~i~W~k~~~~~l~~~~~~~~~~r~~~~~~g~L~I~~v~~~D~~G~Y~C~a~n 150 (167)
.+..+.+|+++.|.|. +.+ .|. +.++|+|++. .+... ....++....++.|.|.+++.+|+ |.|+|.+.|
T Consensus 16 ~~~~v~~G~~v~L~C~~~~~---~p~~~~v~W~~~~~-~~~~~---~~~~~~~~~~~~~L~i~~v~~~d~-G~Y~C~~~~ 87 (201)
T 3s97_C 16 PEVRVKEGKGMVLLCDPPYH---FPDDLSYRWLLNEF-PVFIT---MDKRRFVSQTNGNLYIANVEASDK-GNYSCFVSS 87 (201)
T ss_dssp CCEEEETTCCEEECCCCCSE---ESSCCEEEEEESST-TCBCC---CSSSEEECTTTCCEEESSCCGGGC-EEEEEEEEE
T ss_pred ceEEEECCCCEEEecccccc---CCCceEEEEEECCc-eeeee---eCCCeEEEcCCCeEEECcCCcccC-eEEEEEEEe
Confidence 4567899999999999 664 477 8999999984 44221 123444555678999999999999 999999999
Q ss_pred cC
Q psy12724 151 RL 152 (167)
Q Consensus 151 ~~ 152 (167)
..
T Consensus 88 ~~ 89 (201)
T 3s97_C 88 PS 89 (201)
T ss_dssp GG
T ss_pred cC
Confidence 65
No 334
>1iam_A ICAM-1, CD54, intercellular adhesion molecule-1; rhinovirus receptor, cell adhesion, integrin ligand, glycopr LFA-1 ligand, immunoglobulin fold; HET: NAG; 2.10A {Homo sapiens} SCOP: b.1.1.3 b.1.1.4 PDB: 1ic1_A* 1d3l_A 1d3e_I 1d3i_I 3tcx_A
Probab=99.15 E-value=3.3e-09 Score=79.74 Aligned_cols=140 Identities=11% Similarity=0.108 Sum_probs=85.9
Q ss_pred eeeEEeEEEEEeCCcEEEEeecCCCCCCcceeeEEeeCCCceee-ecCCc---e-E--E--EeeeEEEecC---------
Q psy12724 13 YEAQVYDVFVIKGNAAVFKCNLPSFVSDHLDVVSWADTDGGQYQ-IDNQD---F-V--V--SQSYTVNIMD--------- 74 (167)
Q Consensus 13 ~~~~~~~~~v~~G~~~~l~C~a~~~~~~~~~~i~W~k~~~~~~~-~~~~~---~-v--~--~g~y~c~~~~--------- 74 (167)
.++.|++..|.+|+++.|.|.+...... .+.|...-.+... .++.. . + + .|.|.|.+..
T Consensus 2 v~v~P~~~~V~~G~Sv~l~Cs~~c~~p~---~~~~~t~l~~~~~~~~~~~~~~l~l~~vs~~g~y~C~~~c~~~~~~~~~ 78 (185)
T 1iam_A 2 TSVSPSKVILPRGGSVLVTCSTSCDQPK---LLGIETPLPKKELLLPGNNRKVYELSNVQEDSQPMCYSNCPDGQSTAKT 78 (185)
T ss_dssp EEEESSEEEEETTEEEEEEEEECSSSCS---EEEEECSSCEEEECSSSSSEEEEEEEEECSCBCCEEEEECSSCEEEEEC
T ss_pred eEEECCCcEEeCCCCEEEEEEccCCCCc---cceEEeeCCCccEeccCCceeEEEEEecCcCCEEEEEEECCCCceEEEE
Confidence 4678889999999999999999643322 3677643222233 22211 1 1 1 4899998631
Q ss_pred -----------------eEEEeCCcEEEEeeeCCccCCcc--eeEEEEeCCCeeeEEeeeecCCceEEEccCCeEEEeec
Q psy12724 75 -----------------EHVLKGNSAVLKCHIPSFVADYV--AVESWISDQGEELFVDMTESTDGKYLVLPSGELHIRDV 135 (167)
Q Consensus 75 -----------------~~v~~G~~a~l~C~~~~~~~~p~--p~i~W~k~~~~~l~~~~~~~~~~r~~~~~~g~L~I~~v 135 (167)
..+.+|+..+|.|.+.+. .|. ..|+|+|++ ..+.... ...... +..|.+..
T Consensus 79 ~l~V~~~P~~v~i~~~~~~~~~G~~~tL~C~v~g~--~P~~~l~i~w~kg~-~~l~~~~--~~~~~~----~~tl~~~~- 148 (185)
T 1iam_A 79 FLTVYWTPERVELAPLPSWQPVGKQLTLRCQVEGG--APRAQLTVVLLRGE-KELKREP--AVGEPA----EVTTTVLV- 148 (185)
T ss_dssp EEEEEBCCSEEEECCCCSEECTTSEEEEEEEEECC--BCGGGEEEEEEETT-EEEEEEE--CCTTTE----EEEEEEEC-
T ss_pred EEEEeCCCCCCEEccCCccccCCCcEEEEEEcCCc--cCCCCcEEEEEeCC-EEccccc--CCCccc----cEEEEEec-
Confidence 135789999999999863 354 368999997 5553211 001111 11466554
Q ss_pred CcCCCCc-ceEEEeeecCc---ce-EEEeeeCCeee
Q psy12724 136 GPEDGYK-SYQCRTKHRLT---GE-TRLSATKGRLV 166 (167)
Q Consensus 136 ~~~D~~G-~Y~C~a~n~~~---~~-~~l~~~~~~~~ 166 (167)
..+|. | .|+|.|.|.+. .. .+-+..+..|.
T Consensus 149 ~reD~-g~~~sC~A~~~l~~~g~~l~~~~s~~~~l~ 183 (185)
T 1iam_A 149 RRDHH-GAQFSCRTELDLRPQGLELFENTSAPYQLQ 183 (185)
T ss_dssp CSSCS-SCEEEEEEEEECGGGTSCEEEEECCCEECE
T ss_pred eeccC-CCeEEEEEEecCcccCCCCccccccCEEEe
Confidence 44554 5 99999999873 22 44455555554
No 335
>1ccz_A Protein (CD58); LFA-3, glycoprotein; HET: NAG; 1.80A {Homo sapiens} SCOP: b.1.1.1 b.1.1.3 PDB: 1ci5_A 1qa9_B
Probab=99.14 E-value=1.7e-10 Score=84.66 Aligned_cols=81 Identities=12% Similarity=0.066 Sum_probs=58.6
Q ss_pred CeEEEeCCcEEEEeeeCCccCCcceeEEEEeCCCeeeEEee------eecCCceEEEc-cCCeEEEeecCcCCCCcceEE
Q psy12724 74 DEHVLKGNSAVLKCHIPSFVADYVAVESWISDQGEELFVDM------TESTDGKYLVL-PSGELHIRDVGPEDGYKSYQC 146 (167)
Q Consensus 74 ~~~v~~G~~a~l~C~~~~~~~~p~p~i~W~k~~~~~l~~~~------~~~~~~r~~~~-~~g~L~I~~v~~~D~~G~Y~C 146 (167)
...+.+|++|+|+|.+. + |.+.|.|+|++ ..+.... .+.-.+|+.+. .+|.|.|++++.+|+ |.|.|
T Consensus 4 ~v~~~~G~~VtL~c~~~---~-~~~~i~W~~~~-~~i~~~~~~~~~~~~~~~~R~~~~~~~~sL~I~~v~~~Ds-G~Y~C 77 (171)
T 1ccz_A 4 QIYGVVYGNVTFHVPSN---V-PLKEVLWKKQK-DKVAELENSEFRAFSSFKNRVYLDTVSGSLTIYNLTSSDE-DEYEM 77 (171)
T ss_dssp EEEEETTCCEEECCCCS---S-CCSCEEEEETT-EEEEEEETTEEEECGGGTTSEEECTTTCCEEECSCCGGGC-EEEEE
T ss_pred EEEEEcCCCEEEcCCCC---C-CcceEEEEeCC-cEEEEEcCCCcccccccCCcEEEeCCCCeEEECCCChhhC-ceEEE
Confidence 35678999999999983 2 78899999987 3442211 00113466554 678999999999999 99999
Q ss_pred EeeecC-cceEEEee
Q psy12724 147 RTKHRL-TGETRLSA 160 (167)
Q Consensus 147 ~a~n~~-~~~~~l~~ 160 (167)
.|.|.. .....|.+
T Consensus 78 ~~~n~~~~~~~~L~V 92 (171)
T 1ccz_A 78 ESPNITDTMKFFLYV 92 (171)
T ss_dssp ECTTCCSCEEEEEEE
T ss_pred EEeCCCCcEEEEEEE
Confidence 998875 34445555
No 336
>3ojm_B Fibroblast growth factor receptor 2; beta trefoil motif, immunoglobulin-like domain, growth facto factor receptor, extracellular; 2.10A {Homo sapiens} PDB: 1nun_B* 3oj2_C 2fdb_P 1iil_E 1ev2_E 1e0o_B* 1ii4_E 1djs_A 3ojv_C* 1cvs_C 1fq9_C* 1evt_C
Probab=99.14 E-value=9.7e-11 Score=87.62 Aligned_cols=73 Identities=16% Similarity=0.291 Sum_probs=55.0
Q ss_pred cCeEEEeCCcEEEEeeeCCccCCcceeEEEEeCCCeeeEEeeeecCCceEEEccCCeEEEeecCcCCCCcceEEEeeecC
Q psy12724 73 MDEHVLKGNSAVLKCHIPSFVADYVAVESWISDQGEELFVDMTESTDGKYLVLPSGELHIRDVGPEDGYKSYQCRTKHRL 152 (167)
Q Consensus 73 ~~~~v~~G~~a~l~C~~~~~~~~p~p~i~W~k~~~~~l~~~~~~~~~~r~~~~~~g~L~I~~v~~~D~~G~Y~C~a~n~~ 152 (167)
.+..+.+|+++.|.|.+.+ .|.|.++|+|++ ..+.... ..........++.|.|.+++.+|+ |.|+|.|.|..
T Consensus 27 ~~~~v~~G~~v~L~C~~~~---~p~~~v~W~~~~-~~~~~~~--~~~~~~~~~~~~~L~i~~~~~~d~-G~Y~C~~~n~~ 99 (231)
T 3ojm_B 27 RLHAVPAANTVKFRCPAGG---NPMPTMRWLKNG-KEFKQEH--RIGGYKVRNQHWSLIMESVVPSDK-GNYTCVVENEY 99 (231)
T ss_dssp SCEEEETTSCEEEECCEEE---ESCCEEEEEETT-EECCGGG--STTCCEEEGGGTEEEECSCCGGGC-EEEEEEEEETT
T ss_pred eeEEEccCCCEEEEEeccc---CCCCeEEEEECC-ccccccc--cccceeeecCcceEEEecCCcccC-EEEEEEEeccc
Confidence 4567889999999999974 488899999997 4553210 011113334456899999999999 99999999976
No 337
>3p2t_A Leukocyte immunoglobulin-like receptor subfamily 4; LILR, IG, inhibitory receptor, disulfide, immune system; 1.70A {Homo sapiens}
Probab=99.14 E-value=7.6e-11 Score=87.29 Aligned_cols=65 Identities=12% Similarity=0.127 Sum_probs=49.6
Q ss_pred EEEeCCcEEEEeeeCCccCCcceeEEEEeCCCeeeEEeeeecCCceEEE--ccCCeEEEeecCcCCCCcceEEEeeecC
Q psy12724 76 HVLKGNSAVLKCHIPSFVADYVAVESWISDQGEELFVDMTESTDGKYLV--LPSGELHIRDVGPEDGYKSYQCRTKHRL 152 (167)
Q Consensus 76 ~v~~G~~a~l~C~~~~~~~~p~p~i~W~k~~~~~l~~~~~~~~~~r~~~--~~~g~L~I~~v~~~D~~G~Y~C~a~n~~ 152 (167)
.+.+|++++|.|.+.+ |.+.+.|+|++. .+.. ..+... ..++.|.|.+++.+|+ |.|+|.|.|..
T Consensus 15 ~v~~G~~v~L~C~~~~----~~~~~~w~k~g~-~~~~------~~~~~~~~~~~~~L~i~~v~~~D~-G~Y~C~a~n~~ 81 (196)
T 3p2t_A 15 VISWGNSVTIWCQGTL----EAREYRLDKEES-PAPW------DRQNPLEPKNKARFSIPSMTEDYA-GRYRCYYRSPV 81 (196)
T ss_dssp EEETTCCEEEEEECCT----TCCEEEEEETTS-CSCS------EEECCCSSSSEEEEEESSCCGGGC-EEEEEEEEETT
T ss_pred cCCCCCcEEEEeeCCC----CCCEEEEEECCC-CCcc------cccccccCCceEEEEeccCCcccC-ceEEEEEeCCC
Confidence 7889999999999974 567889999984 4421 111111 2346899999999999 99999999975
No 338
>1xt5_A Variable region-containing chitin-binding protein 3; innate immunity, VCBP, primordial antigen receptor, florida lancelet, amphioxus; 1.15A {Branchiostoma floridae}
Probab=99.13 E-value=2.5e-10 Score=79.79 Aligned_cols=88 Identities=22% Similarity=0.325 Sum_probs=59.4
Q ss_pred CeEEEeCCcEEEEeeeCCccCCcceeEEEEeCCCee----eEEe-------------------eeecCCceEEEcc--CC
Q psy12724 74 DEHVLKGNSAVLKCHIPSFVADYVAVESWISDQGEE----LFVD-------------------MTESTDGKYLVLP--SG 128 (167)
Q Consensus 74 ~~~v~~G~~a~l~C~~~~~~~~p~p~i~W~k~~~~~----l~~~-------------------~~~~~~~r~~~~~--~g 128 (167)
...+.+|++|+|+|.+......+.+.+.|+|++... +... ..+.-.+|+.+.. ++
T Consensus 13 ~v~v~~G~~v~L~C~~~~~~~~~~~~v~W~k~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~ 92 (135)
T 1xt5_A 13 EVEVHAGGTVELPCSYQLANDTQPPVISWLKGASPDRSTKVFKGNYNWQGEGLGFVESDSYKESFGDFLGRASVANLAAP 92 (135)
T ss_dssp EEEEETTSCEEECCEEEEETCCSCCEEEEEEESSSSSEEEEEEEEECCCCTTCCCCTTSEEEEECGGGTTTEEESCTTSC
T ss_pred eEEEeCCCCEEEeeEeecCCCCCccEEEEEeeCCCCCceEEEEeccccccccccccccccccccChhhcCcEEEecCCCC
Confidence 457889999999999742113477889999975321 1110 0001126776654 36
Q ss_pred eEEEeecCcCCCCcceEEEeeecC--------cceEEEeeeC
Q psy12724 129 ELHIRDVGPEDGYKSYQCRTKHRL--------TGETRLSATK 162 (167)
Q Consensus 129 ~L~I~~v~~~D~~G~Y~C~a~n~~--------~~~~~l~~~~ 162 (167)
.|.|++++.+|+ |.|.|.+.|.. ...+.|.+++
T Consensus 93 sL~I~~v~~~D~-G~Y~C~v~~~~~~~~~g~~~~~~~L~V~g 133 (135)
T 1xt5_A 93 TLRLTHVHPQDG-GRYWCQVAQWSIRTEFGLDAKSVVLKVTG 133 (135)
T ss_dssp CEEECSCCGGGC-EEEEEEEECSSCCSGGGEEEEEEEEEEET
T ss_pred eEEECCCChhhC-cEEEEEEEcCCccccccccceeEEEEEec
Confidence 899999999999 99999999853 2456666654
No 339
>2oyp_A Hepatitis A virus cellular receptor 2; TIM-3, T-cell immunoglobulin mucin, signaling protein; 1.95A {Mus musculus} PDB: 3kaa_A*
Probab=99.13 E-value=2.4e-10 Score=76.83 Aligned_cols=77 Identities=19% Similarity=0.251 Sum_probs=50.9
Q ss_pred eEEEeCCcEEEEeeeCCccCCcceeEEEEeCCCe-----eeEEee-----eecCCceEEEccC-----CeEEEeecCcCC
Q psy12724 75 EHVLKGNSAVLKCHIPSFVADYVAVESWISDQGE-----ELFVDM-----TESTDGKYLVLPS-----GELHIRDVGPED 139 (167)
Q Consensus 75 ~~v~~G~~a~l~C~~~~~~~~p~p~i~W~k~~~~-----~l~~~~-----~~~~~~r~~~~~~-----g~L~I~~v~~~D 139 (167)
..+.+|++|.|+|.+.+........+.|+|++.. .+.-.. .....+|+.+..+ ..|.|++++.+|
T Consensus 4 v~~~~G~~v~L~C~~~~~~~~~~~~v~W~~~~~~~~~~~~~~~~~~g~~~~~~~~~r~~~~~~~~~~~~sL~I~~v~~~D 83 (109)
T 2oyp_A 4 YKVEVGKNAYLPCSYTLPTSGTLVPMCWGKGFCPWSQCTNELLRTDERNVTYQKSSRYQLKGDLNKGDVSLIIKNVTLDD 83 (109)
T ss_dssp EEECTTSCEEECCBCCCCTTCCCCCEEEESSSCCSSSCSSEEEEECSSSEEEESCTTEEECSCGGGTBCCEEECSCCGGG
T ss_pred EEEEcCCCEEEEEEeECCCCCCeEEEEEEecCCCCCCceeEEEEcCCcCccccccceEEEccCccCCcEeEEEccCCChh
Confidence 4678899999999986421111235899996521 111000 0012456766432 579999999999
Q ss_pred CCcceEEEeeecC
Q psy12724 140 GYKSYQCRTKHRL 152 (167)
Q Consensus 140 ~~G~Y~C~a~n~~ 152 (167)
+ |.|.|.+.|..
T Consensus 84 ~-G~Y~C~v~~~~ 95 (109)
T 2oyp_A 84 H-GTYCCRIQFPG 95 (109)
T ss_dssp C-EEEEEEECCSS
T ss_pred C-eEEEEEEEcCC
Confidence 9 99999999865
No 340
>3sgj_C Human FCG3A receptor; receptor complex, FC receptor, antibody, immune system; HET: NAG BMA MAN FUC; 2.20A {Homo sapiens} PDB: 3sgk_C*
Probab=99.12 E-value=2.8e-10 Score=85.54 Aligned_cols=75 Identities=17% Similarity=0.284 Sum_probs=57.3
Q ss_pred EEEecCeEEEeCCcEEEEeeeCCccCCccee-EEEEeCCCeeeEEeeeecCCceEEEccCCeEEEeecCcCCCCcceEEE
Q psy12724 69 TVNIMDEHVLKGNSAVLKCHIPSFVADYVAV-ESWISDQGEELFVDMTESTDGKYLVLPSGELHIRDVGPEDGYKSYQCR 147 (167)
Q Consensus 69 ~c~~~~~~v~~G~~a~l~C~~~~~~~~p~p~-i~W~k~~~~~l~~~~~~~~~~r~~~~~~g~L~I~~v~~~D~~G~Y~C~ 147 (167)
...+.+..+.+|+++.|.|.+.+ .|.|. ++|+||+ ..+. .. ++.|.|.+++.+|+ |.|+|.
T Consensus 11 ~~~p~~~~v~~G~~v~L~C~~~~---~p~~~~v~W~k~g-~~l~-------~~------~~~L~i~~v~~~D~-G~Y~C~ 72 (204)
T 3sgj_C 11 FLEPQWYRVLEKDSVTLKCQGAY---SPEDQSTQWFHNE-SLIS-------SQ------ASSYFIDAATVDDS-GEYRCQ 72 (204)
T ss_dssp EEESCCSEEETTCCEEEEEECCS---SSSCCCEEEEETT-EEES-------CC------SSEEEESSCCGGGC-EEEEEE
T ss_pred EEcCCCeEEECCCCEEEEEcCCC---CCCCcEEEEEECC-EEcc-------cC------ccEEEEecccccCC-EEEEEE
Confidence 33445568899999999999984 46665 9999997 4442 11 27899999999999 999999
Q ss_pred eeecC-cceEEEeee
Q psy12724 148 TKHRL-TGETRLSAT 161 (167)
Q Consensus 148 a~n~~-~~~~~l~~~ 161 (167)
|.|.. +..+.|.+.
T Consensus 73 a~n~~~s~~~~l~V~ 87 (204)
T 3sgj_C 73 TQLSTLSDPVQLEVH 87 (204)
T ss_dssp ETTSBCCCCEEEEEE
T ss_pred eCCCcccccEEEEEe
Confidence 99865 455555553
No 341
>1ow0_A IG alpha-1 chain C region; IGA1, fcari, CD89, antibody, immunoglobulin-LIK immune system; HET: NAG FUL BMA GAL SIA FUC MAN NDG; 3.10A {Homo sapiens} SCOP: b.1.1.2 b.1.1.2 PDB: 2qej_A*
Probab=99.12 E-value=7.6e-12 Score=94.58 Aligned_cols=133 Identities=13% Similarity=0.192 Sum_probs=78.5
Q ss_pred eeeEEeEEEEEeCCcEEEEeecCCCCCCcceeeEEeeCCCcee-e-------ecCCc----eE--------EEeeeEEEe
Q psy12724 13 YEAQVYDVFVIKGNAAVFKCNLPSFVSDHLDVVSWADTDGGQY-Q-------IDNQD----FV--------VSQSYTVNI 72 (167)
Q Consensus 13 ~~~~~~~~~v~~G~~~~l~C~a~~~~~~~~~~i~W~k~~~~~~-~-------~~~~~----~v--------~~g~y~c~~ 72 (167)
+...|....+.+|+++.|.|.+.+.+...-+.|+| ++....- . .++.. .+ ..|.|.|.+
T Consensus 7 ~~~~P~~~~v~~G~~v~L~C~~~g~~p~~~~~v~W-~~~~~~~~~~~~~~~~~~g~~~~~~~L~I~~~~~~D~g~Y~C~~ 85 (214)
T 1ow0_A 7 SLHRPALEDLLLGSEANLTCTLTGLRDASGVTFTW-TPSSGKSAVQGPPERDLCGCYSVSSVLPGCAEPWNHGKTFTCTA 85 (214)
T ss_dssp EEECCCHHHHHHCSSCCCEEEETTCCSCCCCCCCB-SSCSSCCCEECCCCCCSTTCCCEEEECTTTHHHHHHTCEEEEEE
T ss_pred EEECcChHHhccCCCcEEEEEEeeeECCCCeEEEE-cCCCCCCcccCCceECCCCcEEEEEEEEEeHHHcCCCCeEEEEE
Confidence 34456677788999999999998875410136999 4421110 0 01110 01 158999987
Q ss_pred cCe---------------------EE--------EeCCcEEEEeeeCCccCCcc-eeEEEEeCCCeeeEEeeeecCCceE
Q psy12724 73 MDE---------------------HV--------LKGNSAVLKCHIPSFVADYV-AVESWISDQGEELFVDMTESTDGKY 122 (167)
Q Consensus 73 ~~~---------------------~v--------~~G~~a~l~C~~~~~~~~p~-p~i~W~k~~~~~l~~~~~~~~~~r~ 122 (167)
.+. .+ ..|+++.|.|.+.++ .|. +.|+|+||+ ..+.... ....++
T Consensus 86 ~~~~~~~~~~~~i~~~~~~~~P~v~~~~~~~~~~~~g~~~~L~C~~~g~--~P~~~~v~W~k~g-~~l~~~~--~~~~~~ 160 (214)
T 1ow0_A 86 AYPESKTPLTATLSKSGNTFRPEVHLLPPPSEELALNELVTLTCLARGF--SPKDVLVRWLQGS-QELPREK--YLTWAS 160 (214)
T ss_dssp CCSSCSSCEEEEEECCSSCCCCEEEEECCCTTTTTSSSEEEEEEEEEEE--SSSCCEEEEEETT-EECCGGG--SEECCC
T ss_pred ecCCCCCceeEeeccCCCCCCCEEEecCCCHHHhccCCceEEEEEEeee--ECCCcEEEEEECC-EECCCCc--eeecCC
Confidence 430 01 147779999999763 243 589999997 4543110 000112
Q ss_pred EEc---cCCeEEE------eecCcCCCCcceEEEeeecC
Q psy12724 123 LVL---PSGELHI------RDVGPEDGYKSYQCRTKHRL 152 (167)
Q Consensus 123 ~~~---~~g~L~I------~~v~~~D~~G~Y~C~a~n~~ 152 (167)
... .+|.+.| ......|. |.|+|.|.|..
T Consensus 161 ~~~~~~~dgt~~~~s~l~v~~~~~~~~-~~ytC~v~n~~ 198 (214)
T 1ow0_A 161 RQEPSQGTTTFAVTSILRVAAEDWKKG-DTFSCMVGHEA 198 (214)
T ss_dssp EECSCSSSCCEEEEEEEEEEHHHHHHT-CCEEEEEECTT
T ss_pred cccccCCCCcEEEEEEEEECHHHccCC-CEEEEEEECCC
Confidence 233 4554444 44444557 99999999986
No 342
>3r4d_A CEA-related cell adhesion molecule 1, isoform 1/2; immunoglobulin, beta-sandwich, mceacam1A - immunoglobulin FO spike NTD - galectin-like beta-sandwich fold; HET: NAG; 3.10A {Mus musculus} PDB: 1l6z_A*
Probab=99.12 E-value=4.6e-10 Score=83.02 Aligned_cols=80 Identities=15% Similarity=0.218 Sum_probs=59.4
Q ss_pred EEEecCeEEEeCCcEEEEeeeCCccCCcceeEEEEeCCCe----eeEEee--------eecCCceEEEccCCeEEEeecC
Q psy12724 69 TVNIMDEHVLKGNSAVLKCHIPSFVADYVAVESWISDQGE----ELFVDM--------TESTDGKYLVLPSGELHIRDVG 136 (167)
Q Consensus 69 ~c~~~~~~v~~G~~a~l~C~~~~~~~~p~p~i~W~k~~~~----~l~~~~--------~~~~~~r~~~~~~g~L~I~~v~ 136 (167)
+..+....+.+|+++.|.|.+. +.|.+.++|+|++.. .+.... .+...+|+.+..++.|.|.+++
T Consensus 3 ~i~~~~~~v~~G~~v~L~C~~~---~~~~~~v~W~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~r~~~~~~~~L~i~~v~ 79 (208)
T 3r4d_A 3 TIEAVPPQVAEDNNVLLLVHNL---PLALGAFAWYKGNTTAIDKEIARFVPNSNMNFTGQAYSGREIIYSNGSLLFQMIT 79 (208)
T ss_dssp EEEEESSEEETTCCEEEEEECC---CSSCSEEEEEESSCCCGGGEEEEEEGGGTEEEECTTCCSSEEECTTSCEEECSCC
T ss_pred cccCccceeecCCcEEEEEeCC---CCCceEEEeccCCCCCccceEEEEecCCCccccCccccceeEEecCCeEEEcccc
Confidence 3445567889999999999975 457889999997521 111100 0012467888888999999999
Q ss_pred cCCCCcceEEEeeecC
Q psy12724 137 PEDGYKSYQCRTKHRL 152 (167)
Q Consensus 137 ~~D~~G~Y~C~a~n~~ 152 (167)
.+|+ |.|+|.+.|..
T Consensus 80 ~~D~-G~Y~C~~~~~~ 94 (208)
T 3r4d_A 80 MKDM-GVYTLDMTDEN 94 (208)
T ss_dssp GGGC-EEEEEEEECSS
T ss_pred ccCC-eEEEEEEEccc
Confidence 9999 99999999984
No 343
>2q20_A VK1 O18/O8 germline light chain variable domain; Al, light chain amyloidosis, amyloid, immunoglobulin, protein fibril; 1.30A {Homo sapiens} PDB: 2kqm_A 3cdf_A 3cdc_A 2kqn_A 3cdy_A 2q1e_A 3dvi_A 1igm_L 1bww_A 1b0w_A 1bre_A 1qp1_A 3dvf_A 1rei_A 1wtl_A 1ar2_A 1fgv_L 2bx5_A 2uzi_L* 1bvk_A ...
Probab=99.12 E-value=2.5e-10 Score=77.75 Aligned_cols=75 Identities=17% Similarity=0.352 Sum_probs=53.0
Q ss_pred cCeEEEeCCcEEEEeeeCCccCCcceeEEEEeCC-Cee---eEEee---eecCCceEEEcc---CCeEEEeecCcCCCCc
Q psy12724 73 MDEHVLKGNSAVLKCHIPSFVADYVAVESWISDQ-GEE---LFVDM---TESTDGKYLVLP---SGELHIRDVGPEDGYK 142 (167)
Q Consensus 73 ~~~~v~~G~~a~l~C~~~~~~~~p~p~i~W~k~~-~~~---l~~~~---~~~~~~r~~~~~---~g~L~I~~v~~~D~~G 142 (167)
.+..+.+|++|+|+|.+.+ .|.+.+.|+|++ +.. +.... .+...+|+.+.. +..|.|++++.+|+ |
T Consensus 11 ~~~~v~~G~~v~L~C~~~~---~~~~~v~W~r~~~~~~~~~l~~~~~~~~~~~~~R~~~~~~~~~~~L~I~~v~~~Ds-G 86 (109)
T 2q20_A 11 SSLSASVGDRVTITCQASQ---DISNYLNWYQQKPGKAPKLLIYDASNLETGVPSRFSGSGSGTDFTFTISSLQPEDI-A 86 (109)
T ss_dssp SEEEECTTCCEEEEEEESS---CCTTCEEEEEECTTSCEEEEEETTTEECTTCCTTEEEEEETTEEEEEESSCCGGGC-E
T ss_pred CEEEecCCCcEEEEEeecc---CCCCcEEEEEECCCCCCEEEEEEcCccCCCCCCcEEEeccCCEEEEEECCCChhhC-E
Confidence 4567889999999999974 356789999864 111 11100 001245776643 23799999999999 9
Q ss_pred ceEEEeeec
Q psy12724 143 SYQCRTKHR 151 (167)
Q Consensus 143 ~Y~C~a~n~ 151 (167)
.|.|.+.|.
T Consensus 87 ~Y~C~~~~~ 95 (109)
T 2q20_A 87 TYYCQQYDN 95 (109)
T ss_dssp EEEEEECSS
T ss_pred EEEEEEeeC
Confidence 999999985
No 344
>2d3v_A Leukocyte immunoglobulin-like receptor subfamily A member 5 isoform 1; immunoglobulin-like fold, immune system; 1.85A {Homo sapiens}
Probab=99.12 E-value=1.2e-10 Score=86.33 Aligned_cols=77 Identities=13% Similarity=0.163 Sum_probs=54.0
Q ss_pred eEEEeCCcEEEEeeeCCccCCcceeEEEEeCCCeeeEEeeeecCCceEEEccCCeEEEeecCcCCCCcceEEEeeecC--
Q psy12724 75 EHVLKGNSAVLKCHIPSFVADYVAVESWISDQGEELFVDMTESTDGKYLVLPSGELHIRDVGPEDGYKSYQCRTKHRL-- 152 (167)
Q Consensus 75 ~~v~~G~~a~l~C~~~~~~~~p~p~i~W~k~~~~~l~~~~~~~~~~r~~~~~~g~L~I~~v~~~D~~G~Y~C~a~n~~-- 152 (167)
..+.+|+++.|.|.+.+ .|. .++|+|++ ..+.... ..+.....++.|.|.+++.+|+ |.|+|.|.|..
T Consensus 14 ~~v~~G~~v~L~C~~~~---~~~-~~~W~k~g-~~~~~~~----~~~~~~~~~~~L~i~~v~~~D~-G~Y~C~a~n~~g~ 83 (196)
T 2d3v_A 14 SVISRGNSVTIRCQGTL---EAQ-EYRLVKEG-SPEPWDT----QNPLEPKNKARFSIPSMTEHHA-GRYRCYYYSPAGW 83 (196)
T ss_dssp SEEETTCCEEEEEECCT---TCC-EEEEEETT-CSSCSEE----ECCCSSTTEEEEEESSCCGGGC-EEEEEEEEETTEE
T ss_pred CcccCCCeEEEEEeCCC---CCc-EEEEEECC-CCCCccc----ccccCCccccEEEeccCChhHC-eEEEEEEeCCCCc
Confidence 47889999999999974 354 88999998 3442110 0111122356899999999999 99999999864
Q ss_pred ---cceEEEeee
Q psy12724 153 ---TGETRLSAT 161 (167)
Q Consensus 153 ---~~~~~l~~~ 161 (167)
+..+.|.+.
T Consensus 84 ~~~s~~~~l~V~ 95 (196)
T 2d3v_A 84 SEPSDPLELVVT 95 (196)
T ss_dssp CBCCCCEEEEEE
T ss_pred CCcCccEEEEec
Confidence 234555553
No 345
>1oll_A NK receptor; immune system/receptor, NK cell triggering receptor, immune system, IG domain, cytotoxicity, C2-type IG-like domains; 1.93A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4
Probab=99.12 E-value=2.2e-10 Score=84.59 Aligned_cols=76 Identities=14% Similarity=0.061 Sum_probs=53.5
Q ss_pred EEEeCCcEEEEeeeCCccCCcceeEEEEeCCCeeeEEeeeecCCceEEEccCCeEEEeecCcCCCCcceEEEeeecC---
Q psy12724 76 HVLKGNSAVLKCHIPSFVADYVAVESWISDQGEELFVDMTESTDGKYLVLPSGELHIRDVGPEDGYKSYQCRTKHRL--- 152 (167)
Q Consensus 76 ~v~~G~~a~l~C~~~~~~~~p~p~i~W~k~~~~~l~~~~~~~~~~r~~~~~~g~L~I~~v~~~D~~G~Y~C~a~n~~--- 152 (167)
.+.+|++++|.|.+.+ +.+.+.|+|++ ..+... .........++.|.|.+++.+|+ |.|+|.|.|..
T Consensus 14 ~v~~G~~v~L~C~~~~----~~~~~~w~k~g-~~~~~~----~~~~~~~~~~~~L~I~~v~~~D~-G~Y~C~~~~~~~~~ 83 (188)
T 1oll_A 14 MVPKEKQVTICCQGNY----GAVEYQLHFEG-SLFAVD----RPKPPERINKVKFYIPDMNSRMA-GQYSCIYRVGELWS 83 (188)
T ss_dssp EEETTCCEEEEEECCT----TCCEEEEEETT-EEEEEE----CCSSCTTCCEEEEEESSCCGGGC-EEEEEEEEETTEEC
T ss_pred cCCCCCCEEEEEecCC----CCCEEEEEECC-Cccccc----ccccCCCcceeEEEeCcCCcccC-eEEEEEecCCCCCC
Confidence 7889999999999863 34678999997 454321 11111112356899999999999 99999998853
Q ss_pred --cceEEEeee
Q psy12724 153 --TGETRLSAT 161 (167)
Q Consensus 153 --~~~~~l~~~ 161 (167)
+..+.|.+.
T Consensus 84 ~~s~~~~l~V~ 94 (188)
T 1oll_A 84 EPSNLLDLVVT 94 (188)
T ss_dssp CCCCCEEEEEE
T ss_pred CCCCceEEEec
Confidence 344555553
No 346
>2x1w_L Vascular endothelial growth factor receptor 2; hormone-signaling protein complex, angiogenesis, glycoprotein, HOST-virus interaction, membrane; HET: NAG BMA; 2.70A {Homo sapiens} PDB: 2x1x_R*
Probab=99.11 E-value=9.9e-11 Score=88.00 Aligned_cols=69 Identities=9% Similarity=-0.077 Sum_probs=51.7
Q ss_pred cCeEEEeC--CcEEEEeeeCCccCCcceeEEEEeC--CCeeeEEeeeecCCceEEEccCCeEEEeecCcCCCCcceEEEe
Q psy12724 73 MDEHVLKG--NSAVLKCHIPSFVADYVAVESWISD--QGEELFVDMTESTDGKYLVLPSGELHIRDVGPEDGYKSYQCRT 148 (167)
Q Consensus 73 ~~~~v~~G--~~a~l~C~~~~~~~~p~p~i~W~k~--~~~~l~~~~~~~~~~r~~~~~~g~L~I~~v~~~D~~G~Y~C~a 148 (167)
.+..+.+| +++.|+|.+.+ |.|.++|.|+ ++..+. .+.++....++.|.|.+++.+|+ |.|+|.|
T Consensus 15 ~~v~v~eG~~~~v~L~C~~~~----p~~~v~w~~~~~~g~~~~------~~~~~~~~~~~~l~I~~v~~~D~-G~Y~C~a 83 (213)
T 2x1w_L 15 GVVYITENKNKTVVIPCLGSI----SNLNVSLCARYPEKRFVP------DGNRISWDSKKGFTIPSYMISYA-GMVFCEA 83 (213)
T ss_dssp EEEEECCSTTCEEEECCCBSS----TTCCEEEEEETTTEEECC------CSSSCEEETTTEEEEEGGGTTTC-SEEEEEE
T ss_pred eEEEEecCCCccEEEeeccCC----CCcEEEEEhhcCCCcccc------CCCcccccCCccEEEccCChhcC-ceEEEEE
Confidence 44677889 99999999963 6688999885 433332 23455556678899999999999 9999999
Q ss_pred eecC
Q psy12724 149 KHRL 152 (167)
Q Consensus 149 ~n~~ 152 (167)
.|..
T Consensus 84 ~n~~ 87 (213)
T 2x1w_L 84 KIND 87 (213)
T ss_dssp C---
T ss_pred EECC
Confidence 9854
No 347
>1qfw_M FV, antibody (anti beta subunit) (light chain); glycoprotein hormone; HET: NAG; 3.50A {Mus musculus} SCOP: b.1.1.1
Probab=99.11 E-value=2.9e-10 Score=77.30 Aligned_cols=77 Identities=18% Similarity=0.232 Sum_probs=53.2
Q ss_pred ecCeEEEeCCcEEEEeeeCCccCCcceeEEEEeCCC-e--eeEEee----eecCCceEEEccC---CeEEEeecCcCCCC
Q psy12724 72 IMDEHVLKGNSAVLKCHIPSFVADYVAVESWISDQG-E--ELFVDM----TESTDGKYLVLPS---GELHIRDVGPEDGY 141 (167)
Q Consensus 72 ~~~~~v~~G~~a~l~C~~~~~~~~p~p~i~W~k~~~-~--~l~~~~----~~~~~~r~~~~~~---g~L~I~~v~~~D~~ 141 (167)
+.+..+.+|++|+|+|.+.+. +.+.+.|+|... . .+.-.. .+...+|+.+..+ ..|.|++++.+|+
T Consensus 8 p~~~~v~~G~~v~L~C~~~~~---~~~~v~W~r~~~~~~~~~l~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~Ds- 83 (108)
T 1qfw_M 8 PKSMSMSVGERVTLSCKASET---VDSFVSWYQQKPEQSPKLLIFGASNRFSGVPDRFTGSGSATDFTLTISSVQAEDF- 83 (108)
T ss_dssp CSCEECCTTCCEEEEEEESSC---CCSCEEEEEECTTSCCEEEECSSSCBCTTCCTTEECCBCSSEEEEEESSCCTTCC-
T ss_pred CCeEEEcCCCCEEEEeeeCCC---CCcEEEEEEECCCCCCEEEEEEcCccCCCCCCcEEEEcCCCEEEEEECCCChhhC-
Confidence 345678899999999999743 567899998541 1 111100 0011457766533 2699999999999
Q ss_pred cceEEEeeecC
Q psy12724 142 KSYQCRTKHRL 152 (167)
Q Consensus 142 G~Y~C~a~n~~ 152 (167)
|.|.|.+.|..
T Consensus 84 G~Y~C~~~~~~ 94 (108)
T 1qfw_M 84 ADYHCGQTYNH 94 (108)
T ss_dssp SEEEEEECSSS
T ss_pred EEEEEEEccCC
Confidence 99999999863
No 348
>2coq_A NEW antigen receptor variable domain; IG VNAR, natural TYPE2, immune system; 2.10A {Orectolobus maculatus}
Probab=99.11 E-value=3.2e-10 Score=77.13 Aligned_cols=74 Identities=24% Similarity=0.401 Sum_probs=51.8
Q ss_pred cCeEEEeCCcEEEEeeeCCccCCcceeEEEEeCC-CeeeEEeeeecCCceEEEcc-----CCeEEEeecCcCCCCcceEE
Q psy12724 73 MDEHVLKGNSAVLKCHIPSFVADYVAVESWISDQ-GEELFVDMTESTDGKYLVLP-----SGELHIRDVGPEDGYKSYQC 146 (167)
Q Consensus 73 ~~~~v~~G~~a~l~C~~~~~~~~p~p~i~W~k~~-~~~l~~~~~~~~~~r~~~~~-----~g~L~I~~v~~~D~~G~Y~C 146 (167)
.+..+.+|++|+|+|.+.+. ..+.+.+.|+|+. +....... ...+|+.+.. +..|.|++++.+|+ |.|.|
T Consensus 8 ~~~~v~~G~~v~L~C~~~~~-~~~~~~v~W~r~~~~~~~~~~~--~~~~r~~~~~~~~~~~~~L~I~~~~~~Ds-G~Y~C 83 (108)
T 2coq_A 8 RIATKETGESLTINCVLRDT-ACALDSTNWYRTKLGSTKEQTI--SIGGRYSETVDEGSNSASLTIRDLRVEDS-GTYKC 83 (108)
T ss_dssp SEEEECTTCCEEEEEEECCS-SEEEEEEEEEEEETTCCCEEEC--CCBTTEEEEEETTTTEEEEEECSCCGGGC-EEEEE
T ss_pred ceEEEcCCCCEEEEeEeCCC-cCCCCEEEEEEcCCCCCcEEEE--EeCCceEEEEcCCCCEEEEEECCCCcccC-EEEEE
Confidence 44678899999999999743 1146789999863 11111111 1346776531 23799999999999 99999
Q ss_pred Eeee
Q psy12724 147 RTKH 150 (167)
Q Consensus 147 ~a~n 150 (167)
.+.|
T Consensus 84 ~~~~ 87 (108)
T 2coq_A 84 KAYR 87 (108)
T ss_dssp EEEE
T ss_pred EEEe
Confidence 9998
No 349
>1fnl_A Low affinity immunoglobulin gamma FC region receptor III-B; beta sandwich, immunoglobulin-like, immune system receptor; 1.80A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 PDB: 1e4j_A 1e4k_C* 1t83_C* 1t89_C* 3ay4_C*
Probab=99.11 E-value=3.6e-10 Score=82.27 Aligned_cols=74 Identities=18% Similarity=0.257 Sum_probs=56.3
Q ss_pred EEecCeEEEeCCcEEEEeeeCCccCCccee-EEEEeCCCeeeEEeeeecCCceEEEccCCeEEEeecCcCCCCcceEEEe
Q psy12724 70 VNIMDEHVLKGNSAVLKCHIPSFVADYVAV-ESWISDQGEELFVDMTESTDGKYLVLPSGELHIRDVGPEDGYKSYQCRT 148 (167)
Q Consensus 70 c~~~~~~v~~G~~a~l~C~~~~~~~~p~p~-i~W~k~~~~~l~~~~~~~~~~r~~~~~~g~L~I~~v~~~D~~G~Y~C~a 148 (167)
..+.+..+.+|+++.|.|.+.+. |.|. ++|+|++ ..+. ..++.|.|.+++.+|+ |.|+|.|
T Consensus 12 ~~p~~~~v~~G~~v~L~C~~~~~---p~~~~~~W~~~~-~~~~-------------~~~~~L~i~~~~~~d~-G~Y~C~~ 73 (175)
T 1fnl_A 12 LEPQWYSVLEKDSVTLKCQGAYS---PEDNSTQWFHNE-SLIS-------------SQASSYFIDAATVNDS-GEYRCQT 73 (175)
T ss_dssp EESCCSEEETTCCEEEEEECCCB---TTBCCCEEEETT-EEEE-------------SSCSEEEESSCCGGGC-EEEEEEC
T ss_pred EcCCceeeeCCCcEEEEeeCCCC---CCCcceEEEECC-EEcc-------------CCceEEEEeCCCcccC-EEEEEEe
Confidence 33445578999999999999853 6555 7899997 4442 1357899999999999 9999999
Q ss_pred eecC-cceEEEeee
Q psy12724 149 KHRL-TGETRLSAT 161 (167)
Q Consensus 149 ~n~~-~~~~~l~~~ 161 (167)
.|.. +..+.|.+.
T Consensus 74 ~n~~~s~~~~l~V~ 87 (175)
T 1fnl_A 74 NLSTLSDPVQLEVH 87 (175)
T ss_dssp SSSCCCCCEEEEEE
T ss_pred eCCcccccEEEEEe
Confidence 9865 445555554
No 350
>2dru_A Chimera of CD48 antigen and T-cell surface antige; CD2 binding domain of CD48, immune system; HET: NAG; 2.60A {Rattus norvegicus}
Probab=99.10 E-value=4e-10 Score=83.37 Aligned_cols=84 Identities=14% Similarity=0.224 Sum_probs=58.7
Q ss_pred CeEEEeCCcEEEEeeeCCccCCcceeEEEEeCCCeeeEEee-------e-ecCCceEEE-ccCCeEEEeecCcCCCCcce
Q psy12724 74 DEHVLKGNSAVLKCHIPSFVADYVAVESWISDQGEELFVDM-------T-ESTDGKYLV-LPSGELHIRDVGPEDGYKSY 144 (167)
Q Consensus 74 ~~~v~~G~~a~l~C~~~~~~~~p~p~i~W~k~~~~~l~~~~-------~-~~~~~r~~~-~~~g~L~I~~v~~~D~~G~Y 144 (167)
+..+.+|++|+|+|.+.+ ..+.+.|.|+|++...+.... . +.-.+|+.+ ..+|.|.|++++.+|+ |.|
T Consensus 8 ~v~v~~G~~vtL~c~~~~--~~~~~~i~W~k~~~~~i~~~~~~~~~~~~~~~~~~R~~l~~~~~sL~I~~v~~~D~-G~Y 84 (180)
T 2dru_A 8 NVNAITGSNVTLTILKHP--LASYQRLTWLHTTNQKILEYFPNGKKTVFESVFKDRVDLDKTNGALRIYNVSKEDR-GDY 84 (180)
T ss_dssp EEEEETTSCEEECCCSSC--CCSCSEEEEESSSSCEEEEECSSSCEEECSSTTTTTEEECTTTCCEEECSCCGGGC-EEE
T ss_pred eEEEEeCCCEEEeCCCCC--CCceeEEEEEecCCeEEEEEECCCCeeEcchhcCCeEEEeCCCccEEEcCCCHHHC-eEE
Confidence 357889999999999843 235789999995323332110 0 011268887 6788999999999999 999
Q ss_pred EEEeeecC--cceEEEee
Q psy12724 145 QCRTKHRL--TGETRLSA 160 (167)
Q Consensus 145 ~C~a~n~~--~~~~~l~~ 160 (167)
+|.+.+.. .....|.+
T Consensus 85 ~C~v~~~~~~~~~~~L~V 102 (180)
T 2dru_A 85 YMRMLHETEDQWKITMEV 102 (180)
T ss_dssp EEEEESSSEEEEEEEEEE
T ss_pred EEEEEcCCeEEEEEEEEE
Confidence 99987764 33445555
No 351
>1eaj_A Coxsackie virus and adenovirus receptor; virus/viral protein receptor, immunoglobulin V domain fold, symmetric dimer; 1.35A {Homo sapiens} SCOP: b.1.1.1 PDB: 1f5w_A 2j12_B 2j1k_A 2wbw_B* 2w9l_A* 1rsf_A 1jew_R 1kac_B 1p69_B 1p6a_B
Probab=99.10 E-value=3.9e-10 Score=76.96 Aligned_cols=78 Identities=15% Similarity=0.255 Sum_probs=53.3
Q ss_pred CeEEEeCCcEEEEeeeCCccC-CcceeEEEEeCCC------eeeEEee--------eecCCceEEEccC------CeEEE
Q psy12724 74 DEHVLKGNSAVLKCHIPSFVA-DYVAVESWISDQG------EELFVDM--------TESTDGKYLVLPS------GELHI 132 (167)
Q Consensus 74 ~~~v~~G~~a~l~C~~~~~~~-~p~p~i~W~k~~~------~~l~~~~--------~~~~~~r~~~~~~------g~L~I 132 (167)
...+.+|+++.|+|.+.+... ...+.+.|+|++. ..+.... .....+|+.+..+ +.|.|
T Consensus 14 ~v~~~~G~~v~L~C~~~~~~~~~~~~~v~W~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~sL~I 93 (126)
T 1eaj_A 14 MIEKAKGETAYLPCKFTLSPEDQGPLDIEWLISPADNQKVDQVIILYSGDKIYDDYYPDLKGRVHFTSNDLKSGDASINV 93 (126)
T ss_dssp EEEEETTSCEEECCBEECCTTCCSCEEEEEEEEETTSSCCSEEEEEEETTEEECTTSSTTTTTEEECCSCGGGTBCCEEE
T ss_pred eEEEEeCCCEEEEEEEecCCCCCCceEEEEEEeCCCcCCCceEEEEEeCCeeccccCccccCeeEEEcccccCCeEEEEE
Confidence 356789999999999864311 1125699998752 1221110 0112467776654 68999
Q ss_pred eecCcCCCCcceEEEeeecC
Q psy12724 133 RDVGPEDGYKSYQCRTKHRL 152 (167)
Q Consensus 133 ~~v~~~D~~G~Y~C~a~n~~ 152 (167)
++++.+|+ |.|.|.+.|..
T Consensus 94 ~~v~~~D~-G~Y~C~v~~~~ 112 (126)
T 1eaj_A 94 TNLQLSDI-GTYQCKVKKAP 112 (126)
T ss_dssp CSCCGGGC-EEEEEEEEETT
T ss_pred CcCChHHC-eEEEEEEEcCC
Confidence 99999999 99999999975
No 352
>3bn9_D E2 FAB heavy chain; antibody-protease complex, protein-protein complex, enzyme- inhibitor complex, disease mutation, glycoprotein, hydrolase; 2.17A {Homo sapiens} SCOP: b.1.1.1 b.1.1.2 PDB: 3kr3_H 2xtj_E
Probab=99.10 E-value=3e-10 Score=88.88 Aligned_cols=131 Identities=18% Similarity=0.243 Sum_probs=72.7
Q ss_pred eeEEeEEEEEeCCcEEEEeecCCCCCCcceeeEEeeCC-Ccee--e--e------------cCCc------------eE-
Q psy12724 14 EAQVYDVFVIKGNAAVFKCNLPSFVSDHLDVVSWADTD-GGQY--Q--I------------DNQD------------FV- 63 (167)
Q Consensus 14 ~~~~~~~~v~~G~~~~l~C~a~~~~~~~~~~i~W~k~~-~~~~--~--~------------~~~~------------~v- 63 (167)
..++..+.+.+|+++.|.|.+.+.+.. .+.+.|+|.+ ++.+ . . ...| .+
T Consensus 4 l~qp~~~~v~~G~~v~L~C~~~~~~~~-~~~v~W~r~~~g~~~~~l~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~sL~ 82 (257)
T 3bn9_D 4 LVQSGGGLVKPGGSLRLSCAASGFTFS-SYAMSWVRQAPGKGLEWVSAISGSGGSTYYADSVKGRFTISRDNSKNTLYLQ 82 (257)
T ss_dssp EEEECCEEECTTCEEEEEEEEESSCGG-GCCEEEEEECTTSCEEEEEEECSSSCCEEECGGGTTTEEEEEETTTTEEEEE
T ss_pred EEccCCEEEcCCCcEEEEEEeccccCC-CceEEEEEECCCCCeEEEEEEecCCCceecCcccCCceEEEecCCCCEEEEE
Confidence 346777899999999999999876421 2469998864 2111 0 0 0011 11
Q ss_pred -------EEeeeEEEecCe-----------------------E-------------------EEeCCcEEEEeeeCCccC
Q psy12724 64 -------VSQSYTVNIMDE-----------------------H-------------------VLKGNSAVLKCHIPSFVA 94 (167)
Q Consensus 64 -------~~g~y~c~~~~~-----------------------~-------------------v~~G~~a~l~C~~~~~~~ 94 (167)
.+|.|.|.+.+. . +..|+++.|.|.+.+.
T Consensus 83 I~~v~~~DsG~Y~C~~~~~~g~~~~~~~~~~~~~~~~~~t~L~V~~~~~~~P~v~~~~p~~~~~~g~~v~L~C~~~g~-- 160 (257)
T 3bn9_D 83 MSSLRAEDTAVYYCARPYLTYPQRRGPQNVSPFDNWGQGTMVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDY-- 160 (257)
T ss_dssp EESCCGGGCEEEEEEEECCSSTTSCCCCTTCCEEEECCCEEEEECSSCCBCCEECCCCC-----------CCCEEEEE--
T ss_pred ECCCChhhCEEEEEEEecCCCcccccccccceeeeeCCcEEEEecCCCCcCCcEEEecCcccccCCCcEEEEEEEeeE--
Confidence 169999986421 0 1257889999999753
Q ss_pred Ccce-eEEEEeCCCeeeE-Eee--eecCCceEEEccCCeEEEeecCcCCCCcceEEEeeecC
Q psy12724 95 DYVA-VESWISDQGEELF-VDM--TESTDGKYLVLPSGELHIRDVGPEDGYKSYQCRTKHRL 152 (167)
Q Consensus 95 ~p~p-~i~W~k~~~~~l~-~~~--~~~~~~r~~~~~~g~L~I~~v~~~D~~G~Y~C~a~n~~ 152 (167)
.|.| .++|+|++. .+. ... ....+++|.+ .+.|.|.++..+| |.|+|.|.|..
T Consensus 161 ~P~pi~v~W~k~g~-~~~~~~~~~~~~~~g~y~~--~s~L~I~~~~~~~--g~YtC~v~n~~ 217 (257)
T 3bn9_D 161 FPEPVTVSWNSGAL-TSGVHTFPAVLQSSGLYSL--SSVVTVPSSSLGT--QTYICNVNHKP 217 (257)
T ss_dssp BSSCCEEEETTTTC-CSSCEECCCEECTTSCEEE--EEECCCC---------CEEEEEEEGG
T ss_pred ECCCcEEEEeeCCC-cCCcEecCCeEcCCCCEEE--EEEEEEcccccCC--CeEEEEEEecC
Confidence 3666 899999873 321 000 0012344443 2468898888765 99999999976
No 353
>2e27_L Anti-ciguatoxin antibody, light chain; immunoglobulin fold, immune system; HET: AB0; 1.70A {Mus musculus} PDB: 3iy1_A
Probab=99.10 E-value=3.9e-10 Score=78.39 Aligned_cols=86 Identities=16% Similarity=0.326 Sum_probs=58.6
Q ss_pred cCeEEEeCCcEEEEeeeCCccCCcceeEEEEeCC-Ce-e--eEEe---eeecCCceEEEcc---CCeEEEeecCcCCCCc
Q psy12724 73 MDEHVLKGNSAVLKCHIPSFVADYVAVESWISDQ-GE-E--LFVD---MTESTDGKYLVLP---SGELHIRDVGPEDGYK 142 (167)
Q Consensus 73 ~~~~v~~G~~a~l~C~~~~~~~~p~p~i~W~k~~-~~-~--l~~~---~~~~~~~r~~~~~---~g~L~I~~v~~~D~~G 142 (167)
.+..+.+|++|+|+|.+.+. +.+.+.|+|.. +. + +... ..+...+|+.+.. +..|.|++++.+|+ |
T Consensus 11 ~~v~v~~G~~vtL~C~~~~~---~~~~v~W~r~~~g~~~~~l~~~~~~~~~~~~~R~~~~~~~~~~~L~I~~v~~~Ds-G 86 (119)
T 2e27_L 11 SSLSASLGGKVTITCKANQD---IKKKIAWYQHKPGKGPRLLIYYTSTLKSGISSRFSGSGSGRDYSFSISNLEPEDA-A 86 (119)
T ss_dssp SEEEEETTCCEEEEEEESSC---CTTCEEEEEECTTSCCEEEEETTTEECTTSCTTEEEEEETTEEEEEECSCCGGGC-E
T ss_pred CeEEEeCCCCEEEEEEeCCC---CCceEEEEEECCCCCCEEEEEECCccCCCCCCcEEEEccCCEEEEEECCCChHHC-E
Confidence 45678899999999999743 56789999853 11 1 1110 0001245776643 23799999999999 9
Q ss_pred ceEEEeeecC----cceEEEeeeC
Q psy12724 143 SYQCRTKHRL----TGETRLSATK 162 (167)
Q Consensus 143 ~Y~C~a~n~~----~~~~~l~~~~ 162 (167)
.|.|.+.|.. ..-++|.+.+
T Consensus 87 ~Y~C~~~~~~~~~fg~GT~l~v~~ 110 (119)
T 2e27_L 87 TYYCLQYDNFTWTFGGGTKLEIKR 110 (119)
T ss_dssp EEEEEECGGGCCEECCCEEEEEEC
T ss_pred EEEEEEccCCceEECCCEEEEEeC
Confidence 9999999853 4455666644
No 354
>1c1e_H Catalytic antibody 1E9 (heavy chain); diels-alder, immunoglobulin, immune system; HET: ENH; 1.90A {Mus musculus} SCOP: b.1.1.1 b.1.1.2 PDB: 1dbb_H* 1dba_H* 1dbj_H* 1dbk_H* 1dbm_H* 2dbl_H* 3ojd_B 1jgl_H* 1jhk_H 1ghf_H 1tet_H* 3e8u_H 1fj1_B 1cl7_H
Probab=99.10 E-value=3.9e-10 Score=84.58 Aligned_cols=78 Identities=17% Similarity=0.340 Sum_probs=54.6
Q ss_pred cCeEEEeCCcEEEEeeeCCccCCcceeEEEEeCC-CeeeEE--ee---------eecCCceEEEcc-----CCeEEEeec
Q psy12724 73 MDEHVLKGNSAVLKCHIPSFVADYVAVESWISDQ-GEELFV--DM---------TESTDGKYLVLP-----SGELHIRDV 135 (167)
Q Consensus 73 ~~~~v~~G~~a~l~C~~~~~~~~p~p~i~W~k~~-~~~l~~--~~---------~~~~~~r~~~~~-----~g~L~I~~v 135 (167)
.+..+.+|++|.|.|.+.+. ..+.+.+.|+|++ +..+.. .. .+...+|+.+.. ++.|.|+++
T Consensus 8 ~~~~v~~G~~v~L~C~~~~~-~~~~~~v~W~k~~~g~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~~L~I~~v 86 (219)
T 1c1e_H 8 GPELKKPGETVKISCKASGY-MFTNYGMNWVKQAPGKALKLMGWINPYTGESTFADDFKGRFAFFLETSATTAYLQINNL 86 (219)
T ss_dssp CCEEECTTCCEEEEEEEESS-CGGGSEEEEEEECTTSCEEEEEEECSSSCCEEECGGGCSSEEEEEEGGGTEEEEEECSC
T ss_pred CCeEecCCCcEEEEEEEeCc-ccccceEEEEEeCCCCCcEEEEEEecCCCceEeCcccCCcEEEEEecCCCEEEEEECCC
Confidence 45678899999999999753 1136889999973 222210 00 001246777653 258999999
Q ss_pred CcCCCCcceEEEeeecC
Q psy12724 136 GPEDGYKSYQCRTKHRL 152 (167)
Q Consensus 136 ~~~D~~G~Y~C~a~n~~ 152 (167)
+.+|+ |.|.|.|.|..
T Consensus 87 ~~~D~-G~Y~C~~~~~~ 102 (219)
T 1c1e_H 87 KNEDM-ATYFCARGTTI 102 (219)
T ss_dssp CGGGC-EEEEEEEEETT
T ss_pred CcccC-EEEEEEEeccC
Confidence 99999 99999999964
No 355
>2gi7_A GPVI protein; IG-like domains, blood clotting, cell adhesion; 2.40A {Homo sapiens}
Probab=99.10 E-value=3.4e-10 Score=83.28 Aligned_cols=67 Identities=16% Similarity=0.167 Sum_probs=52.8
Q ss_pred eEEEeCCcEEEEeeeCCccCCcceeEEEEeCCCeeeEEeeeecCCceEEEccCCeEEEeecCcCCCCcceEEEeeecC--
Q psy12724 75 EHVLKGNSAVLKCHIPSFVADYVAVESWISDQGEELFVDMTESTDGKYLVLPSGELHIRDVGPEDGYKSYQCRTKHRL-- 152 (167)
Q Consensus 75 ~~v~~G~~a~l~C~~~~~~~~p~p~i~W~k~~~~~l~~~~~~~~~~r~~~~~~g~L~I~~v~~~D~~G~Y~C~a~n~~-- 152 (167)
..+.+|++++|.|.+.+ |.+.++|+|++. . ....++.|.|.+++.+|+ |.|+|.|.|..
T Consensus 17 ~~v~~G~~v~L~C~~~~----~~~~~~W~k~g~-~-------------~~~~~~~L~i~~v~~~D~-G~Y~C~a~n~~g~ 77 (184)
T 2gi7_A 17 SLVPLEKPVTLRCQGPP----GVDLYRLEKLSS-S-------------RYQDQAVLFIPAMKRSLA-GRYRCSYQNGSLW 77 (184)
T ss_dssp SEEETTCCEEEEEECST----TCSEEEEEETTT-C-------------CEESSSEEEESSCCGGGC-EEEEEEEEETTEE
T ss_pred ccccCCCcEEEEEeCCC----CCCEEEEEECCc-c-------------ccCcccEEEECcCChhhC-ceEEEEEEcCCCc
Confidence 47889999999999863 667899999974 2 113467899999999999 99999999954
Q ss_pred ---cceEEEee
Q psy12724 153 ---TGETRLSA 160 (167)
Q Consensus 153 ---~~~~~l~~ 160 (167)
+..+.|.+
T Consensus 78 ~~~s~~~~l~V 88 (184)
T 2gi7_A 78 SLPSDQLELVA 88 (184)
T ss_dssp BCCCCCEEEEE
T ss_pred cCCCCCEEEEe
Confidence 33455555
No 356
>1c5d_H Monoclonal antibody against the main immunogenic the human muscle acetylcholine receptor...; immunoglobulin, immune system; 2.40A {Rattus norvegicus} SCOP: b.1.1.1 b.1.1.2 PDB: 2arj_H 3b9k_H* 2gk0_H 2gjz_H 1fn4_B 3mj8_H 3mj9_H*
Probab=99.10 E-value=5.3e-10 Score=84.20 Aligned_cols=129 Identities=16% Similarity=0.234 Sum_probs=77.8
Q ss_pred eEEeEEEEEeCCcEEEEeecCCCCCCcceeeEEeeCC-Cce---ee-ec-----------CCc------------eE---
Q psy12724 15 AQVYDVFVIKGNAAVFKCNLPSFVSDHLDVVSWADTD-GGQ---YQ-ID-----------NQD------------FV--- 63 (167)
Q Consensus 15 ~~~~~~~v~~G~~~~l~C~a~~~~~~~~~~i~W~k~~-~~~---~~-~~-----------~~~------------~v--- 63 (167)
.+|.++.+.+|+++.|.|.+.+.+.+ .+.+.|+|++ +.. +. .. ..| .+
T Consensus 5 ~qp~~~~v~~G~~v~L~C~~~~~~~~-~~~v~W~r~~~~~~~~~l~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~~L~I~ 83 (215)
T 1c5d_H 5 LESGPGLVQPSQTLSLTCTVSGFPLT-TNGVSWVRQPPGKGLEWIAAISSGGSPYYNSALKSRLSINRDTSKSQVFLKMN 83 (215)
T ss_dssp EEECCCEECTTCCEEEEEEECSSCTT-SCCEEEEEECTTSCCEEEEEECTTCCEECCTTTGGGEEEEEETTTTEEEEEES
T ss_pred EcCCCeeecCCCcEEEEEEECCCcCC-CCeEEEEEECCCCCcEEEEEEcCCCCcEECCcccCcEEEEeeCCCceEEEEEC
Confidence 45778899999999999999876522 2579999863 211 10 00 001 11
Q ss_pred -----EEeeeEEEecCe-------------E-------------------EEeCCcEEEEeeeCCccCCcce-eEEEEeC
Q psy12724 64 -----VSQSYTVNIMDE-------------H-------------------VLKGNSAVLKCHIPSFVADYVA-VESWISD 105 (167)
Q Consensus 64 -----~~g~y~c~~~~~-------------~-------------------v~~G~~a~l~C~~~~~~~~p~p-~i~W~k~ 105 (167)
.+|.|.|.+.+. . +.+|+.+.|.|.+.+. .|.| .++|+|+
T Consensus 84 ~v~~~D~G~Y~C~~~~~~~~~~~~~~~~~L~V~~~~~~~P~i~~~~~~~~~~~g~~v~L~C~~~g~--~P~p~~v~W~~~ 161 (215)
T 1c5d_H 84 SLQTEDTAIYFCTREDGWNYFDYWGPGTMVTVSSAQTTAPSVYPLAPGCGDTTSSTVTLGCLVKGY--FPEPVTVTWNSG 161 (215)
T ss_dssp SCCGGGCEEEEEEECCSSSCSCCBCCCEEEEECSSCCBCCCEEEECCCSSCCCCSSEEEEEEEEEE--BSSCCEEEEGGG
T ss_pred CCCcccCEEEEEEEecCCcccceEcCCEEEEecCCCCCCCeEEeccCChhhccCCcEEEEEEEeee--EcCCcEEEEccC
Confidence 169999987431 0 1258899999999753 3777 8999998
Q ss_pred CCeeeEEeeee--cCCceEEEccCCeEEEeecCcCCCCcceEEEeeecCc
Q psy12724 106 QGEELFVDMTE--STDGKYLVLPSGELHIRDVGPEDGYKSYQCRTKHRLT 153 (167)
Q Consensus 106 ~~~~l~~~~~~--~~~~r~~~~~~g~L~I~~v~~~D~~G~Y~C~a~n~~~ 153 (167)
+. .+...... ..++.|.+. ..|. . ...|. |.|+|.|.|...
T Consensus 162 g~-~~~~~~~~~~~~~g~~~~~--s~L~--~-~~~~~-g~ytC~v~n~~~ 204 (215)
T 1c5d_H 162 AL-SSDVHTFPAVLQSGLYTLT--SSVT--S-STWPS-QTVTCNVAHPAS 204 (215)
T ss_dssp TT-CCSCCBCCCEEETTEEEEE--EEEE--E-SSTTT-SCCEEEEEEGGG
T ss_pred Cc-cCceEecCcccCCCCEEEE--EEEe--c-ccCCC-CeEEEEEEeCCC
Confidence 73 32100000 001333321 1233 2 33356 999999999873
No 357
>4gjt_B Poliovirus receptor-related protein 4; six-bladed -propeller, IGV-like fold, viral entry, MV-H, NEC BETA4/BETA5 groove; HET: NAG; 3.10A {Homo sapiens}
Probab=99.10 E-value=2.5e-10 Score=79.50 Aligned_cols=86 Identities=21% Similarity=0.336 Sum_probs=54.6
Q ss_pred CeEEEeCCcEEEEeeeCCccCCcceeEEEEeCCCee---eEEeee--------ecCCceEEEcc------CCeEEEeecC
Q psy12724 74 DEHVLKGNSAVLKCHIPSFVADYVAVESWISDQGEE---LFVDMT--------ESTDGKYLVLP------SGELHIRDVG 136 (167)
Q Consensus 74 ~~~v~~G~~a~l~C~~~~~~~~p~p~i~W~k~~~~~---l~~~~~--------~~~~~r~~~~~------~g~L~I~~v~ 136 (167)
...+.+|++|+|+|.+.+......+.+.|+|.+... ...... +.-.+|+.+.. +.+|.|+|++
T Consensus 9 ~vtv~~G~~v~L~C~~~~~~~~~~~~V~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~~sL~I~~v~ 88 (123)
T 4gjt_B 9 VVTVVLGQDAKLPCFYRGDSGEQVGQVAWARVDAGEGAQELALLHSKYGLHVSPAYEGRVEQPPPPRNPLDGSVLLRNAV 88 (123)
T ss_dssp EEECCTTSEEEECCEECCCTTCCEEEEEEEECCCSSCCCEEEEECSSSCCCBCGGGTTTEECCCSSCCTTBCCEEEESCC
T ss_pred EEEEEcCCCEEEEEEEeCCccCceeEEEEEEcCCCCCcceeEEEEecCCcEeCccceeEEEEecCCCcCCEEEEEECCCC
Confidence 356789999999999864322334568999864211 110000 01124555432 2469999999
Q ss_pred cCCCCcceEEEeeec-C---cceEEEee
Q psy12724 137 PEDGYKSYQCRTKHR-L---TGETRLSA 160 (167)
Q Consensus 137 ~~D~~G~Y~C~a~n~-~---~~~~~l~~ 160 (167)
.+|+ |.|.|.+.+. . .+.+.|+|
T Consensus 89 ~~Ds-G~Y~C~v~t~~~g~~~~~~~L~V 115 (123)
T 4gjt_B 89 QADE-GEYECRVSTFPAGSFQARLRLRV 115 (123)
T ss_dssp SSSC-SEEEEEEEESSSCEEEEEEEEEC
T ss_pred hHHC-EEEEEEEEECCCCeEEeEEEEEE
Confidence 9999 9999988763 2 44566665
No 358
>3d9a_L Light chain of hyhel10 antibody fragment (FAB); lysozyme, antigen, allergen, antimic bacteriolytic enzyme, glycosidase, hydrolase; 1.20A {Mus musculus} PDB: 3hfm_L 1xgp_A 1xgq_A 1xgr_A 1xgt_A 1dqq_A 1dqm_L 1dqj_A 1nby_A 1nbz_A 1ndg_A 1ndm_A 1xgu_A 1fh5_L 1bm3_L 1opg_L 1mlb_A 1mlc_A 1rih_L 1p2c_A ...
Probab=99.09 E-value=2.1e-10 Score=85.48 Aligned_cols=77 Identities=22% Similarity=0.296 Sum_probs=54.6
Q ss_pred ecCeEEEeCCcEEEEeeeCCccCCcceeEEEEeCCC-eeeE--Ee----eeecCCceEEEccCC---eEEEeecCcCCCC
Q psy12724 72 IMDEHVLKGNSAVLKCHIPSFVADYVAVESWISDQG-EELF--VD----MTESTDGKYLVLPSG---ELHIRDVGPEDGY 141 (167)
Q Consensus 72 ~~~~~v~~G~~a~l~C~~~~~~~~p~p~i~W~k~~~-~~l~--~~----~~~~~~~r~~~~~~g---~L~I~~v~~~D~~ 141 (167)
+.+..+.+|+++.|.|.+.+ .|.|.++|+|++. ..+. .. ......+|+.+..++ .|.|.+++.+|+
T Consensus 8 p~~~~v~~G~~v~L~C~~~~---~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~D~- 83 (213)
T 3d9a_L 8 PATLSVTPGNSVSLSCRASQ---SIGNNLHWYQQKSHESPRLLIKYASQSISGIPSRFSGSGSGTDFTLSINSVETEDF- 83 (213)
T ss_dssp CSEEEECTTCCEEEEEEESS---CCTTCEEEEEECTTSCCEEEEETTTEECTTSCTTEEEEEETTEEEEEESSCCGGGC-
T ss_pred CccEEEeCCCcEEEEEECCC---CCCCCEEEEEeCCCCCcEEEEEEcccccccccccEEEEcCCCEEEEEECCCChhhC-
Confidence 34567889999999999984 4778899998531 2110 00 000113577665433 799999999999
Q ss_pred cceEEEeeecC
Q psy12724 142 KSYQCRTKHRL 152 (167)
Q Consensus 142 G~Y~C~a~n~~ 152 (167)
|.|+|.|.|..
T Consensus 84 G~Y~C~~~~~~ 94 (213)
T 3d9a_L 84 GMYFCQQSNSW 94 (213)
T ss_dssp EEEEEEECSSS
T ss_pred EEEEEeeecCC
Confidence 99999999975
No 359
>2vr9_A Roundabout 1, ROBO; immunoglobulin-like domain, AXON guidance, cell adhesion, immunoglobulin domain; 3.2A {Drosophila melanogaster} PDB: 2vra_A*
Probab=99.09 E-value=2.4e-10 Score=85.27 Aligned_cols=76 Identities=22% Similarity=0.405 Sum_probs=55.9
Q ss_pred EEEecCeEEEeCCcEEEEeeeCCccCCcceeEEEEeCCCeeeEEeeeecCCceEEEccCCeE----EEeecCcCCCCcce
Q psy12724 69 TVNIMDEHVLKGNSAVLKCHIPSFVADYVAVESWISDQGEELFVDMTESTDGKYLVLPSGEL----HIRDVGPEDGYKSY 144 (167)
Q Consensus 69 ~c~~~~~~v~~G~~a~l~C~~~~~~~~p~p~i~W~k~~~~~l~~~~~~~~~~r~~~~~~g~L----~I~~v~~~D~~G~Y 144 (167)
.-.+.+..+.+|+++.|.|.+.+ .|.|.++|+|++ ..+... ..........+|.+ .|.+++.+|+ |.|
T Consensus 13 ~~~p~~~~v~~G~~v~L~C~~~g---~p~~~v~W~~~g-~~~~~~---~~~~~~~~~~~~~~~~~l~i~~v~~~d~-G~Y 84 (217)
T 2vr9_A 13 IEHPTDLVVKKNEPATLNCKVEG---KPEPTIEWFKDG-EPVSTN---EKKSHRVQFKDGALFFYRTMQGKKEQDG-GEY 84 (217)
T ss_dssp EECCCCEEECTTSCEEECCEEEC---SSCCEEEEEETT-EECCCS---SSSSSEEECTTSCEEESSCCBSSSCBCC-EEE
T ss_pred ecCCCceEEeCCCcEEEEEEcCC---CCCCeEEEEECC-cCccCC---CccceeEEecCCceEEEEEeccCCcccC-ceE
Confidence 33455678889999999999974 588899999997 455321 01122334455655 6889999999 999
Q ss_pred EEEeeecC
Q psy12724 145 QCRTKHRL 152 (167)
Q Consensus 145 ~C~a~n~~ 152 (167)
+|.|.|..
T Consensus 85 ~C~~~n~~ 92 (217)
T 2vr9_A 85 WCVAKNRV 92 (217)
T ss_dssp EEEEEETT
T ss_pred EEEEecCC
Confidence 99999976
No 360
>3grw_A Fibroblast growth factor receptor 3; FGFR3, protein-protein complex, receptor tyrosine kinas binding, immunoglobulin domain, kinase, membrane, nucleotid binding; HET: NAG; 2.10A {Homo sapiens}
Probab=99.09 E-value=2.2e-10 Score=86.60 Aligned_cols=72 Identities=19% Similarity=0.318 Sum_probs=54.4
Q ss_pred CeEEEeCCcEEEEeeeCCccCCcceeEEEEeCCCeeeEEeeeecCCceEEEccCCeEEEeecCcCCCCcceEEEeeecC
Q psy12724 74 DEHVLKGNSAVLKCHIPSFVADYVAVESWISDQGEELFVDMTESTDGKYLVLPSGELHIRDVGPEDGYKSYQCRTKHRL 152 (167)
Q Consensus 74 ~~~v~~G~~a~l~C~~~~~~~~p~p~i~W~k~~~~~l~~~~~~~~~~r~~~~~~g~L~I~~v~~~D~~G~Y~C~a~n~~ 152 (167)
...+.+|+++.|.|.+.+ .|.|.++|+|++ ..+.... ..........++.|.|.+++.+|+ |.|+|.|.|..
T Consensus 24 ~~~v~~G~~v~L~C~~~~---~p~~~v~W~~~~-~~~~~~~--~~~~~~~~~~~~~L~i~~v~~~d~-G~Y~C~~~~~~ 95 (241)
T 3grw_A 24 LLAVPAANTVRFRCPAAG---NPTPSISWLKNG-REFRGEH--RIGGIKLRHQQWSLVMESVVPSDR-GNYTCVVENKF 95 (241)
T ss_dssp EEEEETTSEEEEECCEEC---SSCCEEEEEETT-EECCGGG--STTCCEEEGGGTEEEECSCCGGGC-EEEEEEEEETT
T ss_pred ceEEcCCCeEEEEEEecC---CCCceeEEEECC-cccCCCC--cccceeeeccceEEEEEeCCcccC-EEEEEEEeecC
Confidence 357789999999999974 588899999997 4553210 011223344567899999999999 99999999976
No 361
>4fmk_A Poliovirus receptor-related protein 2; immunoglobulin-like domain, IG domain, viral entry receptor, adhesion; HET: NAG BMA MAN FUC; 2.56A {Mus musculus} PDB: 4fn0_A* 4fs0_A*
Probab=99.09 E-value=6.9e-10 Score=82.01 Aligned_cols=78 Identities=17% Similarity=0.265 Sum_probs=51.2
Q ss_pred CeEEEeCCcEEEEeeeCCccCCcceeEEEEeCCCeeeEEee---------eecCCceEEEc----------cCCeEEEee
Q psy12724 74 DEHVLKGNSAVLKCHIPSFVADYVAVESWISDQGEELFVDM---------TESTDGKYLVL----------PSGELHIRD 134 (167)
Q Consensus 74 ~~~v~~G~~a~l~C~~~~~~~~p~p~i~W~k~~~~~l~~~~---------~~~~~~r~~~~----------~~g~L~I~~ 134 (167)
+..+.+|++|.|+|.+.+....+...|+|+|+++..+.... .....+|.... .++.|.|++
T Consensus 10 ~V~~~~G~~v~L~C~~~~~~~~~~~~V~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sL~I~~ 89 (225)
T 4fmk_A 10 EVRGRLGGTVELPCHLLPPTTERVSQVTWQRLDGTVVAAFHPSFGVDFPNSQFSKDRLSFVRARPETNADLRDATLAFRG 89 (225)
T ss_dssp EEEEETTSCEEECCEECSSCCCEEEEEEEECTTSCEEEEEETTTEEECCCTTSCTTTEEECCCSCSCCSSCCBCCEEECS
T ss_pred EEEEecCCCEEEEEEEECCCCCceeEEEEEECCCcceEEEecccceeeccccccccceeeeccccccccccCcEEEEEcc
Confidence 45678999999999997531111235899998753332110 00011222221 245799999
Q ss_pred cCcCCCCcceEEEeeecC
Q psy12724 135 VGPEDGYKSYQCRTKHRL 152 (167)
Q Consensus 135 v~~~D~~G~Y~C~a~n~~ 152 (167)
++.+|+ |.|.|.|.|..
T Consensus 90 v~~~D~-G~Y~C~~~~~~ 106 (225)
T 4fmk_A 90 LRVEDE-GNYTCEFATFP 106 (225)
T ss_dssp CCGGGC-EEEEEEEEEET
T ss_pred CCHHHC-cceEEEEEeCC
Confidence 999999 99999999875
No 362
>1f97_A Junction adhesion molecule; immunoglobulin superfamily, beta-sandwich fold, cell adhesion; 2.50A {Mus musculus} SCOP: b.1.1.1 b.1.1.4
Probab=99.08 E-value=3.1e-10 Score=83.78 Aligned_cols=75 Identities=19% Similarity=0.199 Sum_probs=56.1
Q ss_pred ecCeEEEeCCcEEEEeeeCCccCCcceeEEEEeCCCeeeEEee------eecCCceEEEccCCeEEEeecCcCCCCcceE
Q psy12724 72 IMDEHVLKGNSAVLKCHIPSFVADYVAVESWISDQGEELFVDM------TESTDGKYLVLPSGELHIRDVGPEDGYKSYQ 145 (167)
Q Consensus 72 ~~~~~v~~G~~a~l~C~~~~~~~~p~p~i~W~k~~~~~l~~~~------~~~~~~r~~~~~~g~L~I~~v~~~D~~G~Y~ 145 (167)
+.+..+.+|+++.|.|.+.+ .|.+.++|+|++. .+.... ......|+.+. ++.|.|.+++.+|+ |.|+
T Consensus 8 ~~~~~v~~G~~v~L~C~~~~---~p~~~v~W~~~~~-~~~~~~~~~~~~~~~~~~r~~~~-~~~L~i~~v~~~D~-G~Y~ 81 (212)
T 1f97_A 8 QSDVQVPENESIKLTCTYSG---FSSPRVEWKFVQG-STTALVCYNSQITAPYADRVTFS-SSGITFSSVTRKDN-GEYT 81 (212)
T ss_dssp CSEEEEETTCCEEEECEEES---CSSEEEEEEEEET-TEEEEEEETTEECGGGTTTEEEE-TTEEEESCCCGGGC-EEEE
T ss_pred CCCeEEEcCCCEEEEeEeCC---CCCcEEEEEECCC-ceeeEEecCCcccccccCcEEee-ceeEEEcccCcccC-eEEE
Confidence 34567889999999999974 4889999999874 321100 01124566554 48999999999999 9999
Q ss_pred EEeeecC
Q psy12724 146 CRTKHRL 152 (167)
Q Consensus 146 C~a~n~~ 152 (167)
|.|.|..
T Consensus 82 C~~~~~~ 88 (212)
T 1f97_A 82 CMVSEEG 88 (212)
T ss_dssp EEEEETT
T ss_pred EEEEccC
Confidence 9999963
No 363
>1ypz_E T cell receptor delta, beta-2-microglobulin; H2-T22 protein, T cell receptor delta, immune system; HET: NAG MAN FUC; 3.40A {Mus musculus} SCOP: b.1.1.1 b.1.1.2
Probab=99.08 E-value=3e-09 Score=80.11 Aligned_cols=127 Identities=20% Similarity=0.294 Sum_probs=81.5
Q ss_pred ceeeEEeEEEEEeCCcEEEEeecCCCCCCcceeeEEeeCC-Cc---eee---------------ec---CCc-eE-----
Q psy12724 12 YYEAQVYDVFVIKGNAAVFKCNLPSFVSDHLDVVSWADTD-GG---QYQ---------------ID---NQD-FV----- 63 (167)
Q Consensus 12 ~~~~~~~~~~v~~G~~~~l~C~a~~~~~~~~~~i~W~k~~-~~---~~~---------------~~---~~~-~v----- 63 (167)
.....+.++.+.+|+++.|.|.+.+.. +.+.|+|.+ +. .+. .+ ... .+
T Consensus 3 ~v~q~p~~v~v~~G~~v~L~C~~~~~~----~~v~W~r~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~~~L~I~~v 78 (207)
T 1ypz_E 3 QVEQSPSALSLHEGTDSALRCNFTTTM----RSVQWFRQNSRGSLISLFYLASGTKENGRLKSAFDSKERRYSTLHIRDA 78 (207)
T ss_dssp SEEESCSEEEEETTCCEEEEEEESSCC----SEEEEEEECTTSCCEEEEEESSEEEEETTEEEEECTTTCSEEEEEECSC
T ss_pred ccEECCCeEEEccCCcEEEEEEEeCCC----eEEEEEEeCCCCCeEEEEEEccCCccCCCEEEEeccCCCCEEEEEECCC
Confidence 345567889999999999999998653 259998853 21 110 01 000 11
Q ss_pred ---EEeeeEEEecCe---------------------EEE-------------eCCcEEEEeeeCCccCCcc-eeEEEEeC
Q psy12724 64 ---VSQSYTVNIMDE---------------------HVL-------------KGNSAVLKCHIPSFVADYV-AVESWISD 105 (167)
Q Consensus 64 ---~~g~y~c~~~~~---------------------~v~-------------~G~~a~l~C~~~~~~~~p~-p~i~W~k~ 105 (167)
.+|.|.|.+.+. .|. .+..+.|.|.+.+. .|. |.++|+|+
T Consensus 79 ~~~D~G~Y~C~~~~~~~~~p~~~~~~~~~~~~~t~L~V~~~~~~~~~P~v~~~~~~~~l~C~~~g~--~P~~~~v~W~~~ 156 (207)
T 1ypz_E 79 QLEDSGTYFCAADTWHISEGYELGTDKLVFGQGTQVTVEPKSQPPAKPSVFIMKNGTNVACLVKDF--YPKEVTISLRSS 156 (207)
T ss_dssp CGGGCEEEEEEEECBCCCTTCCCCCCCCEECCCEEEEEECCCCCCCCCEEEEEEETTEEEEEEEEE--SSSCCEEEEECS
T ss_pred CHHHCEEEEEEEecCCcccccccccceeeecCccEEEEccCCCCCCCCeEEEeCCCCeEEEEEeeE--eCCCeEEEEecC
Confidence 179999987432 111 12236889999754 243 78999998
Q ss_pred CCeeeEEeeeecCCceEEEccCCeEEEeecCc-CCCCcceEEEeeecC
Q psy12724 106 QGEELFVDMTESTDGKYLVLPSGELHIRDVGP-EDGYKSYQCRTKHRL 152 (167)
Q Consensus 106 ~~~~l~~~~~~~~~~r~~~~~~g~L~I~~v~~-~D~~G~Y~C~a~n~~ 152 (167)
. .+.. .........+|.+.+..... .|. |.|+|.+.|..
T Consensus 157 -~-~l~~-----~~~~~~~~~~g~y~~~~~~~~~~~-~~ytC~v~~~~ 196 (207)
T 1ypz_E 157 -K-KIVE-----FDPAIVISPSGKYSAVKLGQYGDS-NSVTCSVQHNS 196 (207)
T ss_dssp -S-EEEE-----CCCEEEECTTSSEEEEECEEESST-TTCEEEEEETT
T ss_pred -C-cccC-----CccceEEcCCCcEEEEEeecccCC-CcEEEEEEECC
Confidence 4 4432 12333345677777766655 677 99999999986
No 364
>1mqk_L Antibody 7E2 FV fragment, light chain; membrane protein, cytochrome C oxidase, high- resolution structure, immune system; 1.28A {Mus musculus} SCOP: b.1.1.1 PDB: 1ar1_D 3ehb_D* 3hb3_D* 1qle_L* 1f6l_L 3iy2_A 1vfa_A 1dvf_A 1kir_A 1g7i_A 1g7j_A 1a2y_A 1kip_A 1kiq_A 1vfb_A 1g7h_A 1a7o_L 1g7l_A 1g7m_A 1a7n_L ...
Probab=99.08 E-value=4.1e-10 Score=78.28 Aligned_cols=87 Identities=20% Similarity=0.353 Sum_probs=58.8
Q ss_pred cCeEEEeCCcEEEEeeeCCccCCcceeEEEEeCC-Cee---eEEee---eecCCceEEEcc---CCeEEEeecCcCCCCc
Q psy12724 73 MDEHVLKGNSAVLKCHIPSFVADYVAVESWISDQ-GEE---LFVDM---TESTDGKYLVLP---SGELHIRDVGPEDGYK 142 (167)
Q Consensus 73 ~~~~v~~G~~a~l~C~~~~~~~~p~p~i~W~k~~-~~~---l~~~~---~~~~~~r~~~~~---~g~L~I~~v~~~D~~G 142 (167)
.+..+.+|++|+|+|.+.+ .|.+.+.|+|+. +.. +.... .+...+|+.+.. +..|.|++++.+|+ |
T Consensus 9 ~~~~v~~G~~v~L~C~~~~---~~~~~v~W~r~~~g~~~~~li~~~~~~~~~~~~R~~~~~~~~~~~L~I~~v~~~Ds-G 84 (120)
T 1mqk_L 9 VSLSASVGETVTITCRASE---NIYSYLAWYQQKQGKSPQFLVYNAKTLGEGVPSRFSGSGSGTQFSLKINSLLPEDF-G 84 (120)
T ss_dssp SEEEECTTCCEEEEEEESS---CCTTCEEEEEECTTSCCEEEEETTTEECTTCCTTEEEEEETTEEEEEESSCCGGGC-E
T ss_pred CeEEEcCCCcEEEEEEeCC---CCCceEEEEEECCCCCCEEEEEeCCcCCCCCCceEEEeccCCEEEEEECCCCHHHC-E
Confidence 4567889999999999974 356789999853 111 11100 001246776653 23799999999999 9
Q ss_pred ceEEEeeecC-----cceEEEeeeCC
Q psy12724 143 SYQCRTKHRL-----TGETRLSATKG 163 (167)
Q Consensus 143 ~Y~C~a~n~~-----~~~~~l~~~~~ 163 (167)
.|.|.+.|.. ...++|.+.+.
T Consensus 85 ~Y~C~~~~~~~~~~fg~gt~L~V~~~ 110 (120)
T 1mqk_L 85 SYYCQHHYGTPPLTFGGGTKLEIKRE 110 (120)
T ss_dssp EEEEEECSSSSSCCBCCCEEEEEC--
T ss_pred EEEEEEEeCCCceEECCCeEEEEecC
Confidence 9999999853 45667777543
No 365
>1i8k_A Epidermal growth factor receptor antibody MR1SCFV light chain; antibody-peptide complex, immunoglobulin fold, type II' beta turn., immune system; 1.80A {Mus musculus} SCOP: b.1.1.1 PDB: 1i8i_A
Probab=99.08 E-value=3.3e-10 Score=76.89 Aligned_cols=76 Identities=17% Similarity=0.311 Sum_probs=52.8
Q ss_pred cCeEEEeCCcEEEEeeeCCccCCcceeEEEEeCC-Ce-e--eEEee---eecCCceEEEccC---CeEEEeecCcCCCCc
Q psy12724 73 MDEHVLKGNSAVLKCHIPSFVADYVAVESWISDQ-GE-E--LFVDM---TESTDGKYLVLPS---GELHIRDVGPEDGYK 142 (167)
Q Consensus 73 ~~~~v~~G~~a~l~C~~~~~~~~p~p~i~W~k~~-~~-~--l~~~~---~~~~~~r~~~~~~---g~L~I~~v~~~D~~G 142 (167)
.+..+.+|++|+|+|.+.+ .+.+.+.|+|.. +. + +.... .+...+|+.+..+ ..|.|++++.+|+ |
T Consensus 9 ~~~~~~~G~~v~L~C~~~~---~~~~~v~W~r~~~~~~~~~l~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~Ds-G 84 (107)
T 1i8k_A 9 ASLSVATGEKVTIRCMTST---DIDDDMNWYQQKPGEPPKFLISEGNTLRPGVPSRFSSSGTGTDFVFTIENTLSEDV-G 84 (107)
T ss_dssp SEEECCTTCCEEEEEEESS---CCTTCEEEEEECTTSCCEEEEETTTEECTTSCTTEEEEEETTEEEEEESSCCGGGC-E
T ss_pred CeEEecCCCCEEEEEEECC---CCCCcEEEEEECCCCCCEEEEEecCccCCCCCCCEEEEccCCEEEEEECCCCHHHC-E
Confidence 4467789999999999974 356789999853 11 1 21100 0012457766532 2699999999999 9
Q ss_pred ceEEEeeecC
Q psy12724 143 SYQCRTKHRL 152 (167)
Q Consensus 143 ~Y~C~a~n~~ 152 (167)
.|.|.+.|..
T Consensus 85 ~Y~C~~~~~~ 94 (107)
T 1i8k_A 85 DYYCLQSFNV 94 (107)
T ss_dssp EEEEEECSSS
T ss_pred EEEEEEeeCC
Confidence 9999999863
No 366
>3uto_A Twitchin; kinase, muscle sarcomere, transferase; HET: FLC P33; 2.40A {Caenorhabditis elegans} PDB: 1koa_A
Probab=99.08 E-value=3.3e-10 Score=98.35 Aligned_cols=84 Identities=29% Similarity=0.382 Sum_probs=65.0
Q ss_pred eeEEEecCeEEEeCCcEEEEeeeCCccCCcceeEEEEeCCCeeeEEeeeecCCceEEEccCC---eEEEeecCcCCCCcc
Q psy12724 67 SYTVNIMDEHVLKGNSAVLKCHIPSFVADYVAVESWISDQGEELFVDMTESTDGKYLVLPSG---ELHIRDVGPEDGYKS 143 (167)
Q Consensus 67 ~y~c~~~~~~v~~G~~a~l~C~~~~~~~~p~p~i~W~k~~~~~l~~~~~~~~~~r~~~~~~g---~L~I~~v~~~D~~G~ 143 (167)
.+.-...+..+.+|+++.|.|.+. |.|.|.++|+|++ ..+. .+.|+.+..++ .|.|.++..+|+ |.
T Consensus 484 ~~~~~~~~~~v~~G~~~~~~~~v~---g~P~P~v~W~k~~-~el~------~s~~~~i~~~~~~~~L~I~~~~~~D~-G~ 552 (573)
T 3uto_A 484 RFIVKPYGTEVGEGQSANFYCRVI---ASSPPVVTWHKDD-RELK------QSVKYMKRYNGNDYGLTINRVKGDDK-GE 552 (573)
T ss_dssp EEEECCCCEEECTTSCEEEEEEEE---CSSCCEEEEEETT-EECC------SSSSEEEEEETTEEEEEECSCCGGGC-EE
T ss_pred ccccCCCCcEEeCCCcEEEEEEEE---ccCCCeEEEEECC-EEcc------cCCcEEEEEcCCEEEEEEcCCCcccC-cE
Confidence 344445667888999999999997 4599999999997 5663 35677665433 699999999999 99
Q ss_pred eEEEeeecC---cceEEEeee
Q psy12724 144 YQCRTKHRL---TGETRLSAT 161 (167)
Q Consensus 144 Y~C~a~n~~---~~~~~l~~~ 161 (167)
|+|.|.|.. ++.+.|.+|
T Consensus 553 Yt~~A~N~~G~~~~~v~l~Vt 573 (573)
T 3uto_A 553 YTVRAKNSYGTKEEIVFLNVT 573 (573)
T ss_dssp EEEEEEETTEEEEEEEEEEEC
T ss_pred EEEEEEeCCCcEEEEEEEEEC
Confidence 999999998 334455553
No 367
>4f80_A Butyrophilin subfamily 3 member A1; B7 superfamily, CD277, immune system; 1.94A {Homo sapiens} PDB: 4f9l_A* 4f9p_A 4f8t_A 4f8q_A
Probab=99.07 E-value=4.1e-10 Score=84.97 Aligned_cols=77 Identities=19% Similarity=0.308 Sum_probs=50.2
Q ss_pred eEEEeCCcEEEEeeeCCccCCcceeEEEEeCCCeeeEEeee----------ecCCceEEEcc------CCeEEEeecCcC
Q psy12724 75 EHVLKGNSAVLKCHIPSFVADYVAVESWISDQGEELFVDMT----------ESTDGKYLVLP------SGELHIRDVGPE 138 (167)
Q Consensus 75 ~~v~~G~~a~l~C~~~~~~~~p~p~i~W~k~~~~~l~~~~~----------~~~~~r~~~~~------~g~L~I~~v~~~ 138 (167)
..+.+|++|+|+|.+.+........|+|+|++.......+. .....|..... ++.|.|.+++.+
T Consensus 14 V~v~~G~~v~L~C~v~~~~~~~~~~V~W~k~~~~~~v~~~~~g~~~~~~~~~~~~~r~~~~~~~~~~~~~~L~I~~v~~~ 93 (226)
T 4f80_A 14 ILAMVGEDADLPCHLFPTMSAETMELKWVSSSLRQVVNVYADGKEVEDRQSAPYRGRTSILRDGITAGKAALRIHNVTAS 93 (226)
T ss_dssp EEEETTSCEEEEEEEESCCCCTTSEEEEEETTTCCEEEEEETTEECGGGSCTTTTTTEEEECTTGGGTEEEEEESSCCGG
T ss_pred EEEEcCCcEEEEEEEECCCCCCceEEEEEECCCCceEEEEeCCeEcccccCccccceEEEecccccCCeEEEEEeeCchH
Confidence 56789999999999863211112268999987432211110 00123343332 237999999999
Q ss_pred CCCcceEEEeeecC
Q psy12724 139 DGYKSYQCRTKHRL 152 (167)
Q Consensus 139 D~~G~Y~C~a~n~~ 152 (167)
|+ |.|+|.|.|..
T Consensus 94 D~-G~Y~C~a~n~~ 106 (226)
T 4f80_A 94 DS-GKYLCYFQDGD 106 (226)
T ss_dssp GC-EEEEEEEEETT
T ss_pred HC-eeEEEEEECCC
Confidence 99 99999999976
No 368
>1zvo_C Myeloma immunoglobulin D delta; immunoglobulin fold, antibody, immune system; NMR {Homo sapiens}
Probab=99.07 E-value=8.1e-10 Score=93.95 Aligned_cols=129 Identities=16% Similarity=0.191 Sum_probs=79.6
Q ss_pred EeEEEEEeCCcEEEEeecCCCCCCcceeeEEeeCCCcee--------eecCCc-e-----E--------EEeeeEEEecC
Q psy12724 17 VYDVFVIKGNAAVFKCNLPSFVSDHLDVVSWADTDGGQY--------QIDNQD-F-----V--------VSQSYTVNIMD 74 (167)
Q Consensus 17 ~~~~~v~~G~~~~l~C~a~~~~~~~~~~i~W~k~~~~~~--------~~~~~~-~-----v--------~~g~y~c~~~~ 74 (167)
+....+.+|+++.|.|.+.++.++ ...|+|+|++.... ..+.+. + + ..|.|+|.+.+
T Consensus 304 p~~~~~~~g~~~~L~C~v~g~~P~-~~~i~W~k~g~~~~~~~~~~~~~~~~~gt~~~~s~L~i~~~~~~d~g~y~C~a~n 382 (512)
T 1zvo_C 304 PAVQDLWLRDKATFTCFVVGSDLK-DAHLTWEVAGKVPTGGVEEGLLERHSNGSQSQHSRLTLPRSLWNAGTSVTCTLNH 382 (512)
T ss_pred CChHHhccCCceEEEEEEeceECC-CeEEEEEECCEeccCceeccceecCCCCeEEEEEEEEEchHHhcCCCeEEEEEEe
Confidence 333446789999999999887332 23799999865321 011111 1 1 15999998743
Q ss_pred e-------E----------------EE----eCCcEE-EEeeeCCccCCcc-eeEEEEeCCCeeeEEeeeecCCceEEEc
Q psy12724 75 E-------H----------------VL----KGNSAV-LKCHIPSFVADYV-AVESWISDQGEELFVDMTESTDGKYLVL 125 (167)
Q Consensus 75 ~-------~----------------v~----~G~~a~-l~C~~~~~~~~p~-p~i~W~k~~~~~l~~~~~~~~~~r~~~~ 125 (167)
. . +. .|+.+. |.|.+.++ .|. ..++|+||+ ..+.... .........
T Consensus 383 ~~~~~~~~~~~~~~~~~~~~~p~v~~~~~~~~~~~~~~L~C~~~g~--~P~~i~v~W~k~g-~~~~~~~--~~~~~~~~~ 457 (512)
T 1zvo_C 383 PSLPPQRLMALREPAAQAPVKLSLNLLASSDPPEAASWLLCEVSGF--SPPNILLMWLEDQ-REVNTSG--FAPARPPPQ 457 (512)
T ss_pred CCCCCCceeEEeecCCCCCCCCEEEEEccCcCCCCceEEEEEEeee--CCCCcEEEEEECC-eECcCcc--ccccceeEC
Confidence 1 0 11 378899 99999864 243 358999997 4553110 000112223
Q ss_pred cCC-------eEEEeecCcCCCCcceEEEeeecC
Q psy12724 126 PSG-------ELHIRDVGPEDGYKSYQCRTKHRL 152 (167)
Q Consensus 126 ~~g-------~L~I~~v~~~D~~G~Y~C~a~n~~ 152 (167)
.+| .|.|.....+|. |.|+|.|.|..
T Consensus 458 ~dg~~~~~~s~L~v~~~~~~~~-g~YtC~v~h~~ 490 (512)
T 1zvo_C 458 PGSTTFWAWSVLRVPAPPSPQP-ATYTCVVSHED 490 (512)
T ss_pred CCCCEEEEEEEEEECchhcCCC-CeEEEEEEecC
Confidence 344 366777777778 99999999975
No 369
>2or8_A Hepatitis A virus cellular receptor 1 homolog; beta barrel, immunoglobulin fold, IGV domain, TIM, immune system; 2.50A {Mus musculus}
Probab=99.07 E-value=6.3e-10 Score=75.85 Aligned_cols=87 Identities=17% Similarity=0.235 Sum_probs=57.7
Q ss_pred CeEEEeCCcEEEEeeeCCccCCcceeEEEEeCCCe------eeEEee----eecCCceEEEcc-----CCeEEEeecCcC
Q psy12724 74 DEHVLKGNSAVLKCHIPSFVADYVAVESWISDQGE------ELFVDM----TESTDGKYLVLP-----SGELHIRDVGPE 138 (167)
Q Consensus 74 ~~~v~~G~~a~l~C~~~~~~~~p~p~i~W~k~~~~------~l~~~~----~~~~~~r~~~~~-----~g~L~I~~v~~~ 138 (167)
+..+.+|++|+|+|.+.+. .+.+.+.|+|.... .+.... .....+|+.+.. +..|.|++++.+
T Consensus 6 ~v~~~~G~~v~L~C~~~~~--~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~sL~I~~v~~~ 83 (116)
T 2or8_A 6 EVKGVVGHPVTLPCTYSTY--RGITTTCWGRGQCPSSACQNTLIWTNGHRVTYQKSSRYNLKGHISEGDVSLTIENSVES 83 (116)
T ss_dssp EEEEETTSCEEECCBCCCT--TCCCCEEEEESCCCSSSCTTEEEEECSSSEEEESSTTEECCSCGGGTBCCEEESSCCGG
T ss_pred eEEEEeCCcEEEEEEeeCC--CCCcEEEEEEECCCCCCceEEEEEeCCcccCcCCCCeEEEecCCCCCeEEEEECCCCcc
Confidence 3567899999999998642 23456899997511 111100 011356776532 247999999999
Q ss_pred CCCcceEEEeeecC-----cceEEEeeeCC
Q psy12724 139 DGYKSYQCRTKHRL-----TGETRLSATKG 163 (167)
Q Consensus 139 D~~G~Y~C~a~n~~-----~~~~~l~~~~~ 163 (167)
|+ |.|.|.+.|.. ...+.|.+.|.
T Consensus 84 Ds-G~Y~C~v~~~~~~~~~~~~~~l~V~p~ 112 (116)
T 2or8_A 84 DS-GLYCCRVEIPGWFNDQKVTFSLQVKPE 112 (116)
T ss_dssp GC-EEEEEEECCSSTTCCEEEEEEEEEECS
T ss_pred cC-EEEEEEEEcCCcccccEEEEEEEECCc
Confidence 99 99999999864 23456666554
No 370
>1moe_A Anti-CEA MAB T84.66; anti carcinoembryonic antigen, diabody, dimer, SCFV, variable domain, immune system; 2.60A {Mus musculus} SCOP: b.1.1.1 b.1.1.1
Probab=99.07 E-value=5.8e-10 Score=84.63 Aligned_cols=86 Identities=19% Similarity=0.269 Sum_probs=59.1
Q ss_pred ecCeEEEeCCcEEEEeeeCCccCCc----ceeEEEEeCCC-eee--EEee----eecCCceEEEccCC---eEEEeecCc
Q psy12724 72 IMDEHVLKGNSAVLKCHIPSFVADY----VAVESWISDQG-EEL--FVDM----TESTDGKYLVLPSG---ELHIRDVGP 137 (167)
Q Consensus 72 ~~~~~v~~G~~a~l~C~~~~~~~~p----~p~i~W~k~~~-~~l--~~~~----~~~~~~r~~~~~~g---~L~I~~v~~ 137 (167)
+.+..+.+|++|.|+|.+.+ .| .|.+.|+|++. ..+ .... .....+|+.+..++ .|.|++++.
T Consensus 8 p~~~~v~~G~~v~L~C~~~~---~~~~~~~~~i~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~ 84 (240)
T 1moe_A 8 PASLAVSLGQRATMSCRAGE---SVDIFGVGFLHWYQQKPGQPPKLLIYRASNLESGIPVRFSGTGSRTDFTLIIDPVEA 84 (240)
T ss_dssp CSEEEECTTSCEEEEEEESS---CCEETTEECEEEEEECTTSCCEEEEETTTEECTTCCTTEEEEEETTEEEEEESSCCG
T ss_pred CCeEEecCCCCEEEEEeCCC---ccccCCCceEEEEEECCCCCceEEEEEecccCcCCCccEEEEecCCeEEEEEcCCCh
Confidence 34567889999999999985 36 78899999631 111 1100 00124577765433 799999999
Q ss_pred CCCCcceEEEeeecC----cceEEEeee
Q psy12724 138 EDGYKSYQCRTKHRL----TGETRLSAT 161 (167)
Q Consensus 138 ~D~~G~Y~C~a~n~~----~~~~~l~~~ 161 (167)
+|+ |.|.|.|.|.. +..+.|.+.
T Consensus 85 ~D~-G~Y~C~~~n~~~~~~~~~~~l~V~ 111 (240)
T 1moe_A 85 DDV-ATYYCQQTNEDPYTFGGGTKLEIK 111 (240)
T ss_dssp GGC-EEEEEEECSSSSCCBCCCEEEEEC
T ss_pred hhC-EEEEEEEccCCceeecCCEEEEEe
Confidence 999 99999999973 344556553
No 371
>2vsd_A CHIR AB1; immune system receptor, FC receptor; HET: NAG NDG MAN; 1.82A {Gallus gallus}
Probab=99.07 E-value=1.8e-10 Score=78.37 Aligned_cols=64 Identities=23% Similarity=0.304 Sum_probs=47.0
Q ss_pred EEEeCCcEEEEeeeCCccCCcceeEEEEeCCCeeeEEeeeecCCceEEEc-cCCeEEEeecCcCCCCcceEEEeeecC
Q psy12724 76 HVLKGNSAVLKCHIPSFVADYVAVESWISDQGEELFVDMTESTDGKYLVL-PSGELHIRDVGPEDGYKSYQCRTKHRL 152 (167)
Q Consensus 76 ~v~~G~~a~l~C~~~~~~~~p~p~i~W~k~~~~~l~~~~~~~~~~r~~~~-~~g~L~I~~v~~~D~~G~Y~C~a~n~~ 152 (167)
.+.+|++|+|.|.+.+ +.+.+.|+|++ ..+.. +++... .+..|.|.+++.+|+ |.|+|.+.|..
T Consensus 15 ~v~~G~~VtL~C~~~~----~~~~~~w~k~g-~~~~~-------~~~~~~~~~~~l~I~~v~~~ds-G~Y~C~~~n~~ 79 (105)
T 2vsd_A 15 GVSLGDTVTLRCHLPR----MAAWVQLWLNG-TLRFD-------KEKDKEQDAAEFSFAVTNLEDA-GTYQCRYQVSE 79 (105)
T ss_dssp SCCTTCEEEEEEECCS----SCEEEEEEETT-EEEEE-------EEECTTCSEEEEEEECCSGGGC-EEEEEEEEEET
T ss_pred CcCcCCCEEEEEEcCC----CCcEEEEEECC-cccee-------eeccCCCCEEEEEECCCCHHHC-eEEEEEEEcCC
Confidence 5778999999999974 23567999997 44321 122111 124799999999999 99999999853
No 372
>3k0w_A Mucosa-associated lymphoid tissue lymphoma translocation protein 1, isoform 2; hydrolase, immunoglobulin domain, nucleus, protease; 2.80A {Homo sapiens}
Probab=99.07 E-value=7.2e-10 Score=83.40 Aligned_cols=69 Identities=26% Similarity=0.408 Sum_probs=56.6
Q ss_pred eeEEEecCeEEEeCCcEEEEeeeCCccCCcceeEEEEeCCCeeeEEeeeecCCceEEEccCCeEEEeecCcCCCCcceEE
Q psy12724 67 SYTVNIMDEHVLKGNSAVLKCHIPSFVADYVAVESWISDQGEELFVDMTESTDGKYLVLPSGELHIRDVGPEDGYKSYQC 146 (167)
Q Consensus 67 ~y~c~~~~~~v~~G~~a~l~C~~~~~~~~p~p~i~W~k~~~~~l~~~~~~~~~~r~~~~~~g~L~I~~v~~~D~~G~Y~C 146 (167)
.+...+.+..+.+|+++.|.|.+.+ .|.+.++|+|++ ..+. .+ .++.|.|.+++.+|+ |.|+|
T Consensus 20 ~i~~~p~~~~v~~G~~v~L~C~~~~---~p~~~v~W~~~~-~~~~-------~~-----~~~~L~i~~v~~~d~-G~Y~C 82 (218)
T 3k0w_A 20 KITVNPESKAVLAGQFVKLCCRATG---HPFVQYQWFKMN-KEIP-------NG-----NTSELIFNAVHVKDA-GFYVC 82 (218)
T ss_dssp CEEECCCCEEEETTSBEEEECEETT---TTSSEEEEEETT-EECT-------TC-----CSSEEEETTCCGGGC-EEEEE
T ss_pred EEEECCCCeEEeCCCcEEEEeeecC---CCCCEEEEEECC-EECC-------CC-----CCCEEEEccCChhhC-eEeEE
Confidence 3555667788999999999999974 588899999997 4442 11 256899999999999 99999
Q ss_pred EeeecC
Q psy12724 147 RTKHRL 152 (167)
Q Consensus 147 ~a~n~~ 152 (167)
.|.|..
T Consensus 83 ~~~n~~ 88 (218)
T 3k0w_A 83 RVNNNF 88 (218)
T ss_dssp EEECTT
T ss_pred EEEcCC
Confidence 999985
No 373
>4acp_A IG gamma-1 chain C region; immune system, antibody, kifunensine; HET: NAG; 2.49A {Homo sapiens} PDB: 2j6e_A*
Probab=99.06 E-value=1.8e-10 Score=89.43 Aligned_cols=123 Identities=13% Similarity=0.281 Sum_probs=77.5
Q ss_pred EEeCCcEEEEeecCCCC--CCcceeeEEeeCCCceee--------ecCC-ce-----E--------EEeeeEEEecCe--
Q psy12724 22 VIKGNAAVFKCNLPSFV--SDHLDVVSWADTDGGQYQ--------IDNQ-DF-----V--------VSQSYTVNIMDE-- 75 (167)
Q Consensus 22 v~~G~~~~l~C~a~~~~--~~~~~~i~W~k~~~~~~~--------~~~~-~~-----v--------~~g~y~c~~~~~-- 75 (167)
+..|+++.|.|.+.++. ++ -..|+|+|++. .+. .+.+ .+ + ..+.|+|.+.+.
T Consensus 36 l~~g~~~~L~C~v~g~~p~P~-~i~v~W~k~g~-~l~~~~~~~~~~~~~g~~~~~s~L~i~~~~~~d~~~YtC~v~h~~~ 113 (240)
T 4acp_A 36 LMISRTPEVTCVVVDVSHEDP-EVKFNWYVDGV-EVHNAKTKPREEQYNSTYRVVSVLTVLHQDWLNGKEYKCKVSNKAL 113 (240)
T ss_dssp HSSSSCCEEEEEEESCCC--C-CCEEEEEETTE-EECCCEECCCEEC---CEEEEEEEECCHHHHHHTCCEEEEEECC--
T ss_pred cccCCCcEEEEEEeccccCCC-ccEEEEEECCc-ccCCceeccceECCCCeEEEEEEEEEechhccCCCEEEEEEEcCCC
Confidence 33599999999999975 22 13699999854 331 1111 11 1 148999987431
Q ss_pred --------------------EE-------EeCCcEEEEeeeCCccCCcce-eEEEEeCCCeeeEEee----eecCCceEE
Q psy12724 76 --------------------HV-------LKGNSAVLKCHIPSFVADYVA-VESWISDQGEELFVDM----TESTDGKYL 123 (167)
Q Consensus 76 --------------------~v-------~~G~~a~l~C~~~~~~~~p~p-~i~W~k~~~~~l~~~~----~~~~~~r~~ 123 (167)
.+ +.|+.+.|.|.+.++ .|.+ .++|+||+ ..+.... ..+.++.|.
T Consensus 114 ~~~~~~~i~~~~~~~~~P~V~v~~~~~~~~~g~~~~L~C~~~gf--~P~~i~v~W~k~g-~~~~~~~~~~~~~~~dgt~~ 190 (240)
T 4acp_A 114 PAPIEKTISKAKGQPREPQVYTLPPSRDELTKNQVSLTCLVKGF--YPSDIAVEWESNG-QPENNYKATPPVLDSDGSFF 190 (240)
T ss_dssp --CEEEEECCCCSCCBCCEEEEECCCGGGGGSSEEEEEEEEEEE--BSSCCEEEEEETT-EECSSEEECCCEECTTSCEE
T ss_pred CccccccccccCCCCCCCEEEEECCChHHhcCCceEEEEEEeEE--eCCCcEEEEEECC-EECCCcCccCceECCCCCEE
Confidence 01 138899999999864 2554 78999997 4442110 011233343
Q ss_pred EccCCeEEEeecCcCCCCcceEEEeeecC
Q psy12724 124 VLPSGELHIRDVGPEDGYKSYQCRTKHRL 152 (167)
Q Consensus 124 ~~~~g~L~I~~v~~~D~~G~Y~C~a~n~~ 152 (167)
+. ..|.|......|. |.|+|.+.|..
T Consensus 191 ~~--s~L~v~~~~~~~~-~~ytC~V~h~~ 216 (240)
T 4acp_A 191 LY--SKLTVDKSRWQQG-NVFSCSVMHEA 216 (240)
T ss_dssp EE--EEEEEEHHHHHTT-CCEEEEEECTT
T ss_pred EE--EEEEEChHHhCCC-CEEEEEEEECC
Confidence 32 3577777777788 99999999976
No 374
>1lk3_L 9D7 light chain; antigen-antibody complex, immune system; 1.91A {Rattus norvegicus} SCOP: b.1.1.1 b.1.1.2 PDB: 1fn4_A 1c5d_L 1bfo_A 3b9k_L*
Probab=99.06 E-value=4.1e-10 Score=83.95 Aligned_cols=77 Identities=17% Similarity=0.323 Sum_probs=54.5
Q ss_pred ecCeEEEeCCcEEEEeeeCCccCCcceeEEEEeCC-Ceee--EEe----eeecCCceEEEccCC---eEEEeecCcCCCC
Q psy12724 72 IMDEHVLKGNSAVLKCHIPSFVADYVAVESWISDQ-GEEL--FVD----MTESTDGKYLVLPSG---ELHIRDVGPEDGY 141 (167)
Q Consensus 72 ~~~~~v~~G~~a~l~C~~~~~~~~p~p~i~W~k~~-~~~l--~~~----~~~~~~~r~~~~~~g---~L~I~~v~~~D~~ 141 (167)
+.+..+.+|++|.|+|.+.+ .|.|.++|+|++ +..+ ... ......+|+.+..++ .|.|.+++.+|+
T Consensus 7 p~~~~v~~G~~v~L~C~~~~---~~~~~v~W~~~~~g~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~D~- 82 (210)
T 1lk3_L 7 PPALTVSPGEKLTISCKASE---SVTSRMHWYQQKPGQQPKLLIYKASNLASGVPARFSGSGSGTDFTLTIDPVEADDT- 82 (210)
T ss_dssp CSEEEECTTSCEEEEEEESS---CCTTCEEEEEECTTSCCEEEEETTTEECTTCCTTEEEEEETTEEEEEESSCCGGGC-
T ss_pred CCcEEEcCCCCEEEEeeCCC---ccCCCEEEEEECCCCCeEEEEEccccccCCccccEEEEecCCEEEEEECCCCHHHC-
Confidence 44567889999999999974 467789999853 1111 100 000113577665433 899999999999
Q ss_pred cceEEEeeecC
Q psy12724 142 KSYQCRTKHRL 152 (167)
Q Consensus 142 G~Y~C~a~n~~ 152 (167)
|.|.|.|.|..
T Consensus 83 G~Y~C~~~~~~ 93 (210)
T 1lk3_L 83 AIYFCQQSWNG 93 (210)
T ss_dssp EEEEEEECSSS
T ss_pred eEEEEEEEcCC
Confidence 99999999975
No 375
>3r06_A Anti-mouse CD3epsilon antibody 2C11 FAB light CHA; anti-CD3epsilon, T-cell receptor, signalling, IMMU; 2.50A {Cricetulus migratorius} PDB: 3r08_L 3ld8_B 3ldb_B*
Probab=99.06 E-value=6.1e-10 Score=82.88 Aligned_cols=85 Identities=16% Similarity=0.303 Sum_probs=58.0
Q ss_pred ecCeEEEeCCcEEEEeeeCCccCCcceeEEEEeCC-C-ee-eEEee----eecCCceEEEcc---CCeEEEeecCcCCCC
Q psy12724 72 IMDEHVLKGNSAVLKCHIPSFVADYVAVESWISDQ-G-EE-LFVDM----TESTDGKYLVLP---SGELHIRDVGPEDGY 141 (167)
Q Consensus 72 ~~~~~v~~G~~a~l~C~~~~~~~~p~p~i~W~k~~-~-~~-l~~~~----~~~~~~r~~~~~---~g~L~I~~v~~~D~~ 141 (167)
+.+..+.+|+++.|+|.+.+ .|.+.++|+|++ + .. +.... .....+||.+.. ++.|.|++++.+|+
T Consensus 8 p~~~~v~~G~~v~L~C~~~~---~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~D~- 83 (213)
T 3r06_A 8 PSSLPASLGDRVTINCQASQ---DISNYLNWYQQKPGKAPKLLIYYTNKLADGVPSRFSGSGSGRDSSFTISSLESEDI- 83 (213)
T ss_dssp CSEEEECTTCCEEEEEEESS---CCTTCEEEEEECTTSCCEEEEETTTEECTTCCTTEEEEEETTEEEEEESSCCGGGC-
T ss_pred CCEEEecCCCcEEEEEEeCC---CcCceEEEEEECCCCCcEEEEEEcCcCCCCCCCcEEEeccCCEEEEEECCCCcccC-
Confidence 34467889999999999985 378899999842 1 11 11100 001245776553 33799999999999
Q ss_pred cceEEEeeecC----cceEEEee
Q psy12724 142 KSYQCRTKHRL----TGETRLSA 160 (167)
Q Consensus 142 G~Y~C~a~n~~----~~~~~l~~ 160 (167)
|.|+|.|.|.. ...+.|.+
T Consensus 84 G~Y~C~~~~~~~~~~~~~~~l~V 106 (213)
T 3r06_A 84 GSYYCQQYYNYPWTFGPGTKLEI 106 (213)
T ss_dssp SEEEEEECSSSSCEECCCEEEEE
T ss_pred EEEEEecccCCceEEcCCceEEE
Confidence 99999999863 44455555
No 376
>2pet_A Lutheran blood group glycoprotein; immunoglobulin superfamily., cell adhesion; 1.70A {Homo sapiens} PDB: 2pf6_A
Probab=99.06 E-value=3.4e-10 Score=84.92 Aligned_cols=76 Identities=16% Similarity=0.261 Sum_probs=54.9
Q ss_pred cCeEEEeCCcEEEEeeeCCccCCc-ceeEEEEeCCCe----eeEEeeeec--CCceEE----------EccCCeEEEeec
Q psy12724 73 MDEHVLKGNSAVLKCHIPSFVADY-VAVESWISDQGE----ELFVDMTES--TDGKYL----------VLPSGELHIRDV 135 (167)
Q Consensus 73 ~~~~v~~G~~a~l~C~~~~~~~~p-~p~i~W~k~~~~----~l~~~~~~~--~~~r~~----------~~~~g~L~I~~v 135 (167)
.+..+.+|+++.|.|.+.+ .| .+.++|+|++.. .+....... ..+|+. +..+|.|.|.++
T Consensus 8 ~~~~v~~G~~v~L~C~~~~---~~~~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~L~i~~v 84 (231)
T 2pet_A 8 PLVEVMRGKSVILDCTPTG---THDHYMLEWFLTDRSGARPRLASAEMQGSELQVTMHDTRGRSPPYQLDSQGRLVLAEA 84 (231)
T ss_dssp SEEEEETTCCEEECCCCBS---CCSEEEEEEEEECTTCCCCEEEEEEEETTEEEEEECCCSCCSSCCEECTTCCEEESSC
T ss_pred CcEEEEcCCCEEEecccCC---CCCceEEEEEEeCCCceeEEEEeccccCCccccccccccccccccccCCCceEEEccc
Confidence 4567889999999999975 36 489999987532 221110000 123444 677788999999
Q ss_pred CcCCCCcceEEEeeecC
Q psy12724 136 GPEDGYKSYQCRTKHRL 152 (167)
Q Consensus 136 ~~~D~~G~Y~C~a~n~~ 152 (167)
+.+|+ |.|+|.|.|..
T Consensus 85 ~~~D~-G~Y~C~~~~~~ 100 (231)
T 2pet_A 85 QVGDE-RDYVCVVRAGA 100 (231)
T ss_dssp CGGGC-EEEEEEEECGG
T ss_pred CcccC-ceEEEEEEecC
Confidence 99999 99999999875
No 377
>2ny1_B T-cell surface glycoprotein CD4; HIV, GP120, CD4, viral protein-immune system compl; HET: NAG SUC; 1.99A {Homo sapiens} SCOP: b.1.1.1 b.1.1.3 PDB: 2nxz_B* 2ny0_B* 2nxy_B* 2ny2_B* 2ny3_B* 2ny4_B* 2ny5_C* 2ny6_B* 3jwd_C* 3jwo_C* 1g9m_C* 1g9n_C* 1gc1_C* 1rzj_C* 1rzk_C* 3o2d_A 3cd4_A 3lqa_C* 2b4c_C* 2qad_B* ...
Probab=99.06 E-value=3.1e-10 Score=82.89 Aligned_cols=81 Identities=17% Similarity=0.279 Sum_probs=56.7
Q ss_pred eEEEeCCcEEEEeeeCCccCCcceeEEEEeCCCeeeEEee-------eecCCceEEEc----cCC--eEEEeecCcCCCC
Q psy12724 75 EHVLKGNSAVLKCHIPSFVADYVAVESWISDQGEELFVDM-------TESTDGKYLVL----PSG--ELHIRDVGPEDGY 141 (167)
Q Consensus 75 ~~v~~G~~a~l~C~~~~~~~~p~p~i~W~k~~~~~l~~~~-------~~~~~~r~~~~----~~g--~L~I~~v~~~D~~ 141 (167)
..+.+|+++.|+|.+. +.|.+.++|+|++...+.... .....+|+... .+| .|.|.+++.+|+
T Consensus 5 v~~~~G~~v~L~C~~~---~~~~~~i~W~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~L~i~~v~~~D~- 80 (184)
T 2ny1_B 5 VLGKKGDTVELTCTAS---QKKSIQFHWKNSNQIKILGNQGSFLTKGPSKLNDRADSRRSLWDQGNFPLIIKNLKIEDS- 80 (184)
T ss_dssp EEEETTSCEEECCBCS---SSSCCCEEEEETTCCEEEEEETTEEEECSCTTGGGEECCGGGGGGTBCCEEECSCCGGGC-
T ss_pred EEEeCCCCEEEEEEEc---CCCceEEEEEeCCccceEEecCceEecCChhhCCccccccccccCCeEEEEEecCCHHHC-
Confidence 4678999999999987 458889999999743222110 00113455443 334 499999999999
Q ss_pred cceEEEeeecCcceEEEee
Q psy12724 142 KSYQCRTKHRLTGETRLSA 160 (167)
Q Consensus 142 G~Y~C~a~n~~~~~~~l~~ 160 (167)
|.|+|.+.|.. +.+.|.+
T Consensus 81 G~Y~C~~~~~~-~~~~l~V 98 (184)
T 2ny1_B 81 DTYICEVEDQK-EEVQLLV 98 (184)
T ss_dssp EEEEEEETTEE-EEEEEEE
T ss_pred EEEEEEEEcCC-CcEEEEE
Confidence 99999999975 3455544
No 378
>1uct_A Immunoglobulin alpha FC receptor; beta stands, immune system; 2.10A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 PDB: 1ovz_A* 1ow0_C*
Probab=99.05 E-value=4.2e-10 Score=85.62 Aligned_cols=67 Identities=13% Similarity=0.230 Sum_probs=49.1
Q ss_pred eEEEeCCcEEEEeeeCCccCCcceeEEEEeCCCeeeEEeeeecCCceEE-EccCC--eEEEeecCcCCCCcceEEEeeec
Q psy12724 75 EHVLKGNSAVLKCHIPSFVADYVAVESWISDQGEELFVDMTESTDGKYL-VLPSG--ELHIRDVGPEDGYKSYQCRTKHR 151 (167)
Q Consensus 75 ~~v~~G~~a~l~C~~~~~~~~p~p~i~W~k~~~~~l~~~~~~~~~~r~~-~~~~g--~L~I~~v~~~D~~G~Y~C~a~n~ 151 (167)
..+.+|++++|.|.+.+ |.+.++|+||+ ..+... ..++. ...++ .|.|.+++.+|+ |.|+|.|.|.
T Consensus 18 ~~v~~G~~vtL~C~~~~----~~~~~~W~k~g-~~~~~~-----~~~~~~~~~~~~~~L~I~~v~~~D~-G~Y~C~a~n~ 86 (218)
T 1uct_A 18 PVIPLDGSVKIQCQAIR----EAYLTQLMIIK-NSTYRE-----IGRRLKFWNETDPEFVIDHMDANKA-GRYQCQYRIG 86 (218)
T ss_dssp SEEETTCCEEEEECCCT----TCSEEEEEEEE-TTEEEE-----CSEECC----CCCEEEECSCCGGGC-EEEEEEEEET
T ss_pred CccCCCCCEEEEEEcCC----CCCEEEEEECC-Cccccc-----ccccCCCCcceeeEEEEcccccccC-EEEEEEEEcC
Confidence 46789999999999973 56789999997 344321 11111 12345 899999999999 9999999996
Q ss_pred C
Q psy12724 152 L 152 (167)
Q Consensus 152 ~ 152 (167)
.
T Consensus 87 ~ 87 (218)
T 1uct_A 87 H 87 (218)
T ss_dssp T
T ss_pred C
Confidence 3
No 379
>2jju_A Signal regulatory protein beta-1; immunoglobulin domain, immunoglobulin superfamily, immune system, transmembrane, paired receptor; 1.19A {Homo sapiens} PDB: 2jjv_A 2uv3_A* 2jjt_A* 2jjs_A* 2jjw_A
Probab=99.05 E-value=1.1e-09 Score=76.62 Aligned_cols=75 Identities=23% Similarity=0.383 Sum_probs=51.2
Q ss_pred CeEEEeCCcEEEEeeeCCccCCcceeEEEEeCCCee--eEEeeeecCCceEEEc--------cCCeEEEeecCcCCCCcc
Q psy12724 74 DEHVLKGNSAVLKCHIPSFVADYVAVESWISDQGEE--LFVDMTESTDGKYLVL--------PSGELHIRDVGPEDGYKS 143 (167)
Q Consensus 74 ~~~v~~G~~a~l~C~~~~~~~~p~p~i~W~k~~~~~--l~~~~~~~~~~r~~~~--------~~g~L~I~~v~~~D~~G~ 143 (167)
+..+.+|++|+|.|.+.+. .|.+.+.|+|+++.. +.........+|+... .+..|.|.+++.+|+ |.
T Consensus 12 ~~~v~~G~~vtL~C~~~~~--~~~~~v~W~r~~~~~~~li~~~~~~~~~r~~~~~~~~~~~~~~~~L~I~~v~~~Ds-G~ 88 (127)
T 2jju_A 12 SVSVAAGESATLRCAMTSL--IPVGPIMWFRGAGAGRELIYNQKEGHFPRVTTVSELTKRNNLDFSISISNITPADA-GT 88 (127)
T ss_dssp EEEEETTSCEEECCEESCC--CSCCCEEEEECSSTTCEEEEESSSSCCTTEEEC-------CCBCCEEECSCCGGGC-EE
T ss_pred eEEEeCCCCEEEEEEEeCC--CCCCEEEEEecCCCCcEEEEECCCCccCcEEeeEeeeecCCCEEEEEECCCCHHHC-EE
Confidence 4678899999999999742 256789999976321 2111100011355432 134799999999999 99
Q ss_pred eEEEeeec
Q psy12724 144 YQCRTKHR 151 (167)
Q Consensus 144 Y~C~a~n~ 151 (167)
|.|.+.|.
T Consensus 89 Y~C~~~~~ 96 (127)
T 2jju_A 89 YYCVKFRK 96 (127)
T ss_dssp EEEEEEEC
T ss_pred EEEEEEcC
Confidence 99999985
No 380
>1gsm_A Madcam-1, mucosal addressin cell adhesion molecule-1; cell adhesion protein, immunoglobulin fold, I-SET fold, cell adhesion glycoprotein; 1.9A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 PDB: 1bqs_A*
Probab=99.05 E-value=5.7e-10 Score=85.53 Aligned_cols=78 Identities=17% Similarity=0.171 Sum_probs=55.8
Q ss_pred eEEEecCe--EEEeCCcEEEEeeeCCccCCcce--eEEEEeCCCeeeEEeeeecCCceEE-EccCCeEEEeecCcCCCCc
Q psy12724 68 YTVNIMDE--HVLKGNSAVLKCHIPSFVADYVA--VESWISDQGEELFVDMTESTDGKYL-VLPSGELHIRDVGPEDGYK 142 (167)
Q Consensus 68 y~c~~~~~--~v~~G~~a~l~C~~~~~~~~p~p--~i~W~k~~~~~l~~~~~~~~~~r~~-~~~~g~L~I~~v~~~D~~G 142 (167)
+...+.+. .|.+|+++.|.|.+ +. |.| .|+|++.+. .+ ++.. ...++.|.|+|++.+|+ |
T Consensus 8 ~~V~pp~~~v~v~~G~sv~L~C~a-~~---p~P~~~i~W~~~~~-~l---------~~~~~~~~~~~L~I~~v~~~d~-G 72 (210)
T 1gsm_A 8 LQVEPPEPVVAVALGASRQLTCRL-AC---ADRGASVQWRGLDT-SL---------GAVQSDTGRSVLTVRNASLSAA-G 72 (210)
T ss_dssp EEEESCCSEEEEETTCCEEEEEEE-CC---SSTTCEEEEESSTT-TT---------CCEEEESSEEEEEECSCCGGGC-E
T ss_pred EEEeCCCCceEEeCCCCEEEEEEC-CC---CCCCcceEEeeccc-cc---------CcEEecCCccEEEECccCcccC-c
Confidence 44444443 78899999999999 43 555 999999762 22 2222 22345799999999999 9
Q ss_pred ceEEEeeecC---cceEEEee
Q psy12724 143 SYQCRTKHRL---TGETRLSA 160 (167)
Q Consensus 143 ~Y~C~a~n~~---~~~~~l~~ 160 (167)
.|.|.|.|.. +..++|++
T Consensus 73 ~Y~C~a~n~~~~~~~~~~ltV 93 (210)
T 1gsm_A 73 TRVCVGSCGGRTFQHTVQLLV 93 (210)
T ss_dssp EEEEEEEETTEEEEEEEEEEE
T ss_pred eEEEEEEeCCCceEEEEEEEE
Confidence 9999999986 33345544
No 381
>2ywz_A NEW antigen receptor variable domain; IG VNAR, immune system; 2.21A {Orectolobus maculatus} PDB: 2ywy_A
Probab=99.05 E-value=4.4e-10 Score=76.87 Aligned_cols=75 Identities=24% Similarity=0.348 Sum_probs=52.1
Q ss_pred ecCeEEEeCCcEEEEeeeCCccCCcceeEEEEeCC-CeeeEEeeeecCCceEEEcc-----CCeEEEeecCcCCCCcceE
Q psy12724 72 IMDEHVLKGNSAVLKCHIPSFVADYVAVESWISDQ-GEELFVDMTESTDGKYLVLP-----SGELHIRDVGPEDGYKSYQ 145 (167)
Q Consensus 72 ~~~~~v~~G~~a~l~C~~~~~~~~p~p~i~W~k~~-~~~l~~~~~~~~~~r~~~~~-----~g~L~I~~v~~~D~~G~Y~ 145 (167)
+.+..+.+|++|+|.|.+.+. ..|.+.+.|+|+. +....... ...+|+.+.. +..|.|++++.+|+ |.|.
T Consensus 7 p~~~~~~~G~~v~L~C~~~~~-~~~~~~v~W~r~~~~~~~~~~~--~~~~r~~~~~~~~~~~~~L~I~~v~~~Ds-G~Y~ 82 (111)
T 2ywz_A 7 PRTITKETGESLTIKCVLKDH-SCGLSSTTWYRTQLGSTNEKTI--SIGGRYDETVDKGSKSFSLRISDLRVEDS-GTYK 82 (111)
T ss_dssp CSEEEECTTCCEEEEEEEESC-SSCCCEEEEEEEETTCCCCEEC--CSBTTEEEEEETTTTEEEEEECSCCGGGC-EEEE
T ss_pred CCcEEEccCCCEEEEeEECCC-CCCCCEEEEEEeCCCCCceEee--EeCCCEEEEEeCCCCEEEEEECCCChhcC-EEEE
Confidence 345678899999999998643 1156789999863 11110001 1346776431 23799999999999 9999
Q ss_pred EEeee
Q psy12724 146 CRTKH 150 (167)
Q Consensus 146 C~a~n 150 (167)
|.+.|
T Consensus 83 C~~~~ 87 (111)
T 2ywz_A 83 CQADY 87 (111)
T ss_dssp EEEEE
T ss_pred EEEEc
Confidence 99998
No 382
>2yz1_A Tyrosine-protein phosphatase non-receptor type substrate 1; beta-sandwich, structural genomics, NPPSFA; 1.40A {Mus musculus}
Probab=99.05 E-value=5.1e-10 Score=77.14 Aligned_cols=76 Identities=25% Similarity=0.368 Sum_probs=50.3
Q ss_pred CeEEEeCCcEEEEeeeCCccCCcceeEEEEeCCCee--eEEeeeecCCceEEE-----c-c--CCeEEEeecCcCCCCcc
Q psy12724 74 DEHVLKGNSAVLKCHIPSFVADYVAVESWISDQGEE--LFVDMTESTDGKYLV-----L-P--SGELHIRDVGPEDGYKS 143 (167)
Q Consensus 74 ~~~v~~G~~a~l~C~~~~~~~~p~p~i~W~k~~~~~--l~~~~~~~~~~r~~~-----~-~--~g~L~I~~v~~~D~~G~ 143 (167)
+..+.+|++|+|+|.+.+. .|.+.+.|+|+++.. +.........+|+.. . . +..|.|++++.+|+ |.
T Consensus 16 ~~~~~~G~~v~L~C~~~~~--~~~~~v~W~r~~~~~~~~i~~~~~~~~~r~~~~~~~~~~~~~~~~L~I~~v~~~Ds-G~ 92 (120)
T 2yz1_A 16 SVSVAAGDSTVLNCTLTSL--LPVGPIKWYRGVGQSRLLIYSFTGEHFPRVTNVSDATKRNNMDFSIRISNVTPEDA-GT 92 (120)
T ss_dssp EEEECTTCCEEECCEESCC--CSCCCEEEEESSSTTCEEEEEECEECTTTCCSEEECCBSSTTBCCEEECSCCGGGC-EE
T ss_pred eEEEeCCCCEEEEeEECCC--CCCcEEEEEcCCCCCcEEEEEcCCcccCcccceeeccccCCCeEEEEECCCCHHHC-EE
Confidence 4578899999999999742 256789999986321 221110001122211 1 1 24799999999999 99
Q ss_pred eEEEeeecC
Q psy12724 144 YQCRTKHRL 152 (167)
Q Consensus 144 Y~C~a~n~~ 152 (167)
|.|.+.+..
T Consensus 93 Y~C~~~~~~ 101 (120)
T 2yz1_A 93 YYCVKFQKG 101 (120)
T ss_dssp EEEEEEECC
T ss_pred EEEEEEcCC
Confidence 999999864
No 383
>3s96_B 3B5H10 FAB light chain; huntingtin, immune system; 1.90A {Mus musculus} PDB: 2qhr_L 3ffd_B 4dcq_A
Probab=99.04 E-value=8.6e-10 Score=82.22 Aligned_cols=75 Identities=20% Similarity=0.380 Sum_probs=52.1
Q ss_pred CeEEEeCCcEEEEeeeCCccCC-cceeEEEEeCC---CeeeEEeee--------ecCCceEEEcc---CCeEEEeecCcC
Q psy12724 74 DEHVLKGNSAVLKCHIPSFVAD-YVAVESWISDQ---GEELFVDMT--------ESTDGKYLVLP---SGELHIRDVGPE 138 (167)
Q Consensus 74 ~~~v~~G~~a~l~C~~~~~~~~-p~p~i~W~k~~---~~~l~~~~~--------~~~~~r~~~~~---~g~L~I~~v~~~ 138 (167)
+..+.+|++|.|+|.+.+ . |.+.+.|+|++ ...+.-... ....+|+.+.. ++.|.|.+++.+
T Consensus 9 ~~~v~~G~~v~L~C~~~~---~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~ 85 (218)
T 3s96_B 9 SASFSLGASAKLTCTLNS---QHSTYTIEWYQQQPLKPPKYVMELKKDGSHSTGDGIPDRFSGSSSGADRYLSISNIQPE 85 (218)
T ss_dssp EEEEETTSCEEEEEEECG---GGTTCCEEEEEECTTSCCEEEEEECTTSCEEECSSCCTTEEEEEETTEEEEEESSCCGG
T ss_pred cEEECCCCcEEEEEECCC---CCCCcEEEEEEECCCCCeEEEEEEcccCccccCCCcccceEEecCCceEEEEEccCCcc
Confidence 457889999999999984 4 78899999832 111110000 00124666543 346999999999
Q ss_pred CCCcceEEEeeecC
Q psy12724 139 DGYKSYQCRTKHRL 152 (167)
Q Consensus 139 D~~G~Y~C~a~n~~ 152 (167)
|+ |.|.|.|.|..
T Consensus 86 D~-G~Y~C~~~~~~ 98 (218)
T 3s96_B 86 DE-AIYICGVGDTI 98 (218)
T ss_dssp GC-EEEEEEEEEEE
T ss_pred cC-EEEEEEEecCC
Confidence 99 99999998864
No 384
>2fbo_J V1V2;, variable region-containing chitin-binding protein 3; immunoglobulin, VCBP, V-type, V SET, immune system; 1.85A {Branchiostoma floridae}
Probab=99.04 E-value=3.6e-10 Score=85.73 Aligned_cols=78 Identities=22% Similarity=0.352 Sum_probs=55.2
Q ss_pred CeEEEeCCcEEEEeeeCCccCCcceeEEEEeCCCee----eEEe-------------------eeecCCceEEEcc--CC
Q psy12724 74 DEHVLKGNSAVLKCHIPSFVADYVAVESWISDQGEE----LFVD-------------------MTESTDGKYLVLP--SG 128 (167)
Q Consensus 74 ~~~v~~G~~a~l~C~~~~~~~~p~p~i~W~k~~~~~----l~~~-------------------~~~~~~~r~~~~~--~g 128 (167)
+..+.+|+++.|+|.+.+....|.|.++|+|++... +... ......+|..+.. ++
T Consensus 11 ~v~v~~G~~v~L~C~~~~~~~~~~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~ 90 (250)
T 2fbo_J 11 EVEVHAGGTVELPCSYQLANDTQPPVISWLKGASPDRSTKVFKGNYNWQGEGLGFVESDSYKESFGDFLGRASVANLAAP 90 (250)
T ss_dssp EEEECTTSCEEECCEEEECSCCSCCEEEEEEEEETTEEEEEEEEEECCCBTTBCCCTTSEEEEECGGGTTTEECSCTTSC
T ss_pred ceEEecCCeEEEEEEeEcCCCCCceEEEEEeCCCCCccEEEEeeccccccccccccccccccccCCCcCceEEeccCCcc
Confidence 457789999999999864212588899999986321 1110 0011245665554 35
Q ss_pred eEEEeecCcCCCCcceEEEeeecC
Q psy12724 129 ELHIRDVGPEDGYKSYQCRTKHRL 152 (167)
Q Consensus 129 ~L~I~~v~~~D~~G~Y~C~a~n~~ 152 (167)
.|.|++++.+|+ |.|+|.|.|..
T Consensus 91 ~L~I~~v~~~D~-G~Y~C~~~~~~ 113 (250)
T 2fbo_J 91 TLRLTHVHPQDG-GRYWCQVAQWS 113 (250)
T ss_dssp CEEECSCCGGGC-EEEEEEEECTT
T ss_pred eEEEeeCChhhC-eEEEEEeccCc
Confidence 899999999999 99999999965
No 385
>2ghw_B Anti-SARS SCFV antibody, 80R; S protein, neutralizing antibody, virus/viral protein/antibiotic complex; 2.30A {Homo sapiens} SCOP: b.1.1.1 b.1.1.1
Probab=99.04 E-value=7.7e-10 Score=84.41 Aligned_cols=87 Identities=20% Similarity=0.317 Sum_probs=57.7
Q ss_pred cCeEEEeCCcEEEEeeeCCccCCcceeEEEEeCCC-eee--EEee---------eecCCceEEEccC-----CeEEEeec
Q psy12724 73 MDEHVLKGNSAVLKCHIPSFVADYVAVESWISDQG-EEL--FVDM---------TESTDGKYLVLPS-----GELHIRDV 135 (167)
Q Consensus 73 ~~~~v~~G~~a~l~C~~~~~~~~p~p~i~W~k~~~-~~l--~~~~---------~~~~~~r~~~~~~-----g~L~I~~v 135 (167)
.+..+.+|++|+|+|.+.+. ..+.+.+.|+|++. ..+ .... .....+|+.+..+ +.|.|.++
T Consensus 10 ~~~~v~~G~~v~L~C~~~g~-p~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~I~~v 88 (247)
T 2ghw_B 10 GGGVVQPGKSLRLSCAASGF-AFSSYAMHWVRQAPGKGLEWVAVISYDGSNKYYADSVKGRFTISRDNSKNTLYLQMNSL 88 (247)
T ss_dssp CCEEECTTCCEEEEEEEESS-CGGGSCEEEEEECTTSCEEEEEEECTTSSCEEECTTTTTTEEEEEETTTTEEEEEECSC
T ss_pred CCEEEecCCcEEEEEEeccc-cCCCceEEEEEeCCCCceEEEEEEecCCCceeeCccccCcEEEEEeCCCCEEEEEECcC
Confidence 45678899999999999753 11267899998531 111 1000 0012467776542 36999999
Q ss_pred CcCCCCcceEEEeeecC-----cceEEEeee
Q psy12724 136 GPEDGYKSYQCRTKHRL-----TGETRLSAT 161 (167)
Q Consensus 136 ~~~D~~G~Y~C~a~n~~-----~~~~~l~~~ 161 (167)
+.+|+ |.|.|.|.|.. +..+.|.+.
T Consensus 89 ~~~D~-G~Y~C~~~n~~~~~~~~~~~~l~V~ 118 (247)
T 2ghw_B 89 RAEDT-AVYYCARDRSYYLDYWGQGTLVTVS 118 (247)
T ss_dssp CGGGC-EEEEEEEEETTEEEEECCCEEEEEC
T ss_pred CHHHC-EEEEEeeeccCCccccCCceEEEEe
Confidence 99999 99999999972 334455554
No 386
>1dr9_A B7-1 (CD80), T lymphocyte activation antigen; IG superfamily, immune system; HET: NAG; 3.00A {Homo sapiens} SCOP: b.1.1.1 b.1.1.3 PDB: 1i8l_A*
Probab=99.04 E-value=3.9e-10 Score=83.37 Aligned_cols=76 Identities=14% Similarity=0.143 Sum_probs=53.7
Q ss_pred eEEEeCCcEEEEeeeCCcc-CCcceeEEEEeCCCeeeEEee------eecCCceEEE--ccCCeEEEeecCcCCCCcceE
Q psy12724 75 EHVLKGNSAVLKCHIPSFV-ADYVAVESWISDQGEELFVDM------TESTDGKYLV--LPSGELHIRDVGPEDGYKSYQ 145 (167)
Q Consensus 75 ~~v~~G~~a~l~C~~~~~~-~~p~p~i~W~k~~~~~l~~~~------~~~~~~r~~~--~~~g~L~I~~v~~~D~~G~Y~ 145 (167)
..+.+|++|.|+|.+.+.. +.|.+.+.|.|++ ..+.... .+...+|..+ ..++.|.|.+++.+|+ |.|+
T Consensus 4 v~v~~G~~v~L~C~~~~~~~~~~~~~~~W~~~~-~~i~~~~~~~~~~~~~~~~r~~~~~~~~~~L~I~~v~~~D~-G~Y~ 81 (201)
T 1dr9_A 4 VTKEVKEVATLSCGHNVSVEELAQTRIYWQKEK-KMVLTMMSGDMNIWPEYKNRTIFDITNNLSIVILALRPSDE-GTYE 81 (201)
T ss_dssp EEEETTSCEEECCSCCCCTTHHHHCEEEEEETT-EEEEEEETTEEEECHHHHTTEEEESTTTTEEEECSCCGGGC-EEEE
T ss_pred EEEEeCCCEEEecccCCCcccccccEEEEEeCC-cEEEEEeCCceeecCcccceeEEccCCCcEEEEecccchhC-eEEE
Confidence 5678999999999985321 3478899999997 4542110 0001233332 2456899999999999 9999
Q ss_pred EEeeecC
Q psy12724 146 CRTKHRL 152 (167)
Q Consensus 146 C~a~n~~ 152 (167)
|.|.|..
T Consensus 82 C~~~~~~ 88 (201)
T 1dr9_A 82 CVVLKYE 88 (201)
T ss_dssp EEEEECC
T ss_pred EEEEcCC
Confidence 9999954
No 387
>3mj6_A Junctional adhesion molecule-like; immunoglobulin tandem domain, cell adhesion, cell junction, glycoprotein, immunoglobulin domain, membrane; HET: NAG FUC; 2.19A {Mus musculus} PDB: 3mj7_A* 3mj9_A*
Probab=99.04 E-value=8.6e-10 Score=84.76 Aligned_cols=81 Identities=17% Similarity=0.322 Sum_probs=55.8
Q ss_pred EecCeEEEeCCcEEEEeeeCCccCCcceeEEEEeCCCee-----eEEee------eecCCceEEEcc-----CCeEEEee
Q psy12724 71 NIMDEHVLKGNSAVLKCHIPSFVADYVAVESWISDQGEE-----LFVDM------TESTDGKYLVLP-----SGELHIRD 134 (167)
Q Consensus 71 ~~~~~~v~~G~~a~l~C~~~~~~~~p~p~i~W~k~~~~~-----l~~~~------~~~~~~r~~~~~-----~g~L~I~~ 134 (167)
.+.+..+.+|+++.|+|.+....+.|.+.++|+|++... +.... .+.-.+|+.+.. ++.|.|++
T Consensus 11 ~~~~~~v~~G~~v~L~C~~~~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~I~~ 90 (268)
T 3mj6_A 11 SSPQLRVHVGESVLMGCVVQRTEEKHVDRVDWLFSKDKDDASEYVLFYYSNLSVPTGRFQNRSHLVGDTFHNDGSLLLQD 90 (268)
T ss_dssp -CCEEEEETTCCEEECCBCCCSSCCCEEEEEEEEESSSTTCCEEEEEEETTEEEECGGGTTTEEECSCTTTTBCCEEECS
T ss_pred CCCceEEecCCcEEEEEEeecCCCCceEEEEEEEeCCCCCceEEEEEEcCCCcccCccccCceEEeecCCCCEEEEEECC
Confidence 344567889999999999863334588899999965311 00000 000125565532 37899999
Q ss_pred cCcCCCCcceEEEeeecC
Q psy12724 135 VGPEDGYKSYQCRTKHRL 152 (167)
Q Consensus 135 v~~~D~~G~Y~C~a~n~~ 152 (167)
++.+|+ |.|+|.|.|..
T Consensus 91 v~~~D~-G~Y~C~~~~~~ 107 (268)
T 3mj6_A 91 VQKADE-GIYTCEIRLKN 107 (268)
T ss_dssp CCGGGC-EEEEEEEEETT
T ss_pred CCHhHC-EEEEEEEEecC
Confidence 999999 99999999864
No 388
>3mj8_L Stimulatory hamster antibody HL4E10 FAB light CHA; hamster IGG, immune system; 2.94A {Cricetulus migratorius} PDB: 3mj9_L*
Probab=99.04 E-value=1.1e-09 Score=81.56 Aligned_cols=75 Identities=15% Similarity=0.168 Sum_probs=52.9
Q ss_pred CeEEEeCCcEEEEeeeCCccCCcceeEEEEeC--CCeeeEEee-----eecCCceEEEc---cCCeEEEeecCcCCCCcc
Q psy12724 74 DEHVLKGNSAVLKCHIPSFVADYVAVESWISD--QGEELFVDM-----TESTDGKYLVL---PSGELHIRDVGPEDGYKS 143 (167)
Q Consensus 74 ~~~v~~G~~a~l~C~~~~~~~~p~p~i~W~k~--~~~~l~~~~-----~~~~~~r~~~~---~~g~L~I~~v~~~D~~G~ 143 (167)
+..+.+|++|.|+|.+. +.|.+.+.|+|+ +.....-.. .....+|+.+. .++.|.|++++.+|+ |.
T Consensus 9 ~~~v~~G~~v~L~C~~~---~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~D~-G~ 84 (213)
T 3mj8_L 9 LVSVALGQKATITCSGD---KLSDVYVHWYQQKAGQAPVLVIYEDNRRPSGIPDHFSGSNSGNMATLTISKAQAGDE-AD 84 (213)
T ss_dssp EEEEETTSCEEEEEECS---STTTSCEEEEEECTTSCCEEEEBTTTBCCTTSCTTEEEEEETTEEEEEESSCCGGGC-EE
T ss_pred cEEEeCCCCEEEEEEcC---CCCCceEEEEEECCCCCcEEEEEECCccCCCccCcEEEEecCCEEEEEECCCChhhC-EE
Confidence 45788999999999998 458899999983 211111000 00123566643 244799999999999 99
Q ss_pred eEEEeeecC
Q psy12724 144 YQCRTKHRL 152 (167)
Q Consensus 144 Y~C~a~n~~ 152 (167)
|+|.|.|..
T Consensus 85 Y~C~~~~~~ 93 (213)
T 3mj8_L 85 YYCQSWDGT 93 (213)
T ss_dssp EEEEEEETT
T ss_pred EEEEeccCC
Confidence 999999975
No 389
>2wv3_A Neuroplastin; igcam, membrane, glycoprotein, cell membrane, cell adhesion, transmembrane, disulfide bond, alternative splicing; HET: NAG; 1.95A {Rattus norvegicus}
Probab=99.03 E-value=4.8e-10 Score=82.18 Aligned_cols=68 Identities=19% Similarity=0.273 Sum_probs=50.7
Q ss_pred cCeEEEe-CCcEEEEeeeCCccCCcceeEEEEeCCCeeeEEeeeecCCceEEEccCCeEEEeecCcCCCCcceEEEeeec
Q psy12724 73 MDEHVLK-GNSAVLKCHIPSFVADYVAVESWISDQGEELFVDMTESTDGKYLVLPSGELHIRDVGPEDGYKSYQCRTKHR 151 (167)
Q Consensus 73 ~~~~v~~-G~~a~l~C~~~~~~~~p~p~i~W~k~~~~~l~~~~~~~~~~r~~~~~~g~L~I~~v~~~D~~G~Y~C~a~n~ 151 (167)
.+..+.+ |+++.|.|.+.+. ..|.+.++|+|++ ..+. ...++ ..++.|.|.+++.+|+ |.|+|.|.|.
T Consensus 10 ~~~~v~~~G~~v~l~C~~~~~-~~~~~~v~W~~~~-~~~~------~~~~~--~~~~~L~i~~~~~~d~-G~Y~C~~~n~ 78 (190)
T 2wv3_A 10 EEVIIRDSLLPVTLQCNLTSS-SHTLMYSYWTKNG-VELT------ATRKN--ASNMEYRINKPRAEDS-GEYHCVYHFV 78 (190)
T ss_dssp CCEECCCSSSCEEEEEEEEEC-SSCEEEEEEEETT-EECT------TCCBC--CSEEEEEESSCCGGGC-EEEEEEEEET
T ss_pred ceEEEccCCceEEEEEEeccC-CCCceEEEEEECC-EECc------ccceE--eccEEEEEecCCcccC-EEEEEEEEeC
Confidence 3445556 9999999999754 1134899999997 4542 12222 2567899999999999 9999999997
No 390
>4dzb_B Vbeta2 (MAIT T cell receptor); immune system; 1.70A {Homo sapiens} PDB: 1ymm_E* 3o4l_E* 3o6f_D 3t0e_D 1ktk_E 3mfg_B 2ij0_E
Probab=99.03 E-value=7.1e-10 Score=84.58 Aligned_cols=76 Identities=16% Similarity=0.219 Sum_probs=52.5
Q ss_pred ecCeEEEeCCcEEEEeeeCCccCCcceeEEEEeCC-Ce---eeEEee--------eecCCceEEEcc----CCeEEEeec
Q psy12724 72 IMDEHVLKGNSAVLKCHIPSFVADYVAVESWISDQ-GE---ELFVDM--------TESTDGKYLVLP----SGELHIRDV 135 (167)
Q Consensus 72 ~~~~~v~~G~~a~l~C~~~~~~~~p~p~i~W~k~~-~~---~l~~~~--------~~~~~~r~~~~~----~g~L~I~~v 135 (167)
+.+..+.+|++|.|+|.+.+ .|.+.+.|+|.. +. .+.... .....+|+.+.. +..|.|+++
T Consensus 8 p~~~~v~~G~~v~L~C~~~~---~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~L~I~~v 84 (246)
T 4dzb_B 8 PSWVISKSGTSVKIECRSLD---FQATTMFWYRQFPKQSLMLMATSNEGSKATYEQGVEKDKFLINHASLTLSTLTVTSA 84 (246)
T ss_dssp CSEEEEETTSCEEEEEEESS---SCCCSEEEEEECTTSCCEEEEEECTTSCCEECTTCCGGGEEEEEEETTEEEEEECSC
T ss_pred CcEEEEeCCCcEEEEeEecC---CCceEEEEEEECCCCCcEEEEEEccCCCceecCcccCCcEEEEecCCCEEEEEECCC
Confidence 34567889999999999985 488899999821 00 111000 000126776653 237999999
Q ss_pred CcCCCCcceEEEeeec
Q psy12724 136 GPEDGYKSYQCRTKHR 151 (167)
Q Consensus 136 ~~~D~~G~Y~C~a~n~ 151 (167)
+.+|+ |.|.|.|.|.
T Consensus 85 ~~~D~-G~Y~C~~~~~ 99 (246)
T 4dzb_B 85 HPEDS-SFYICSARTS 99 (246)
T ss_dssp CGGGC-EEEEEEECCS
T ss_pred CHHHC-EEEEEEEecC
Confidence 99999 9999999875
No 391
>2r15_A Myomesin-1; sarcomeric protein, IG-like domains, homodimer, immunoglobul domain, muscle protein, thick filament, contractIle protein; 2.24A {Homo sapiens}
Probab=99.03 E-value=5.4e-10 Score=82.74 Aligned_cols=64 Identities=13% Similarity=0.124 Sum_probs=49.6
Q ss_pred eCCcEEEEeeeCCccCCcceeEEEEeCCCeeeEEeeeecCCceEEEccCC---eEEEeecCcCCCCcceEEEeeecC
Q psy12724 79 KGNSAVLKCHIPSFVADYVAVESWISDQGEELFVDMTESTDGKYLVLPSG---ELHIRDVGPEDGYKSYQCRTKHRL 152 (167)
Q Consensus 79 ~G~~a~l~C~~~~~~~~p~p~i~W~k~~~~~l~~~~~~~~~~r~~~~~~g---~L~I~~v~~~D~~G~Y~C~a~n~~ 152 (167)
.|+.+.|.|.+.++ +|.|.++|+|++ ..+. ...++.+..++ .|.|.+++.+|+ |.|+|.|.|..
T Consensus 16 ~~~~~~l~C~~~~~--~p~~~i~W~~~g-~~i~------~~~~~~~~~~~~~~~L~i~~v~~~D~-G~Y~C~~~n~~ 82 (212)
T 2r15_A 16 TAEGIQLYSFVTYY--VEDLKVNWSHNG-SAIR------YSDRVKTGVTGEQIWLQINEPTPNDK-GKYVMELFDGK 82 (212)
T ss_dssp CSSEEEEEEEBSSC--CSSCEEEEEETT-EECC------CCSSEEEEEETTEEEEEEESCCGGGC-EEEEEEEECSS
T ss_pred cCceEEEEEEEecc--CCCceEEEEECC-EEcc------CCCeEEEEEeCCEEEEEECCCCcccC-EEEEEEEecCC
Confidence 47778888888753 468899999997 5553 24566554433 499999999999 99999999976
No 392
>3d9a_H Heavy chain of hyhel10 antibody fragment (FAB); lysozyme, antigen, allergen, antimic bacteriolytic enzyme, glycosidase, hydrolase; 1.20A {Mus musculus} PDB: 3hfm_H 1gpo_H 3ks0_H* 1dqd_H 1ndm_B 1nak_H 1dqq_B 1dqm_H 1dqj_B 1nby_B 1nbz_B 1xgu_B 1ndg_B 1xgt_B 1xgp_B 1xgq_B 1xgr_B 1s5i_H 1f8t_H 1f90_H ...
Probab=99.03 E-value=6.4e-10 Score=82.97 Aligned_cols=88 Identities=18% Similarity=0.164 Sum_probs=58.4
Q ss_pred ecCeEEEeCCcEEEEeeeCCccCCcceeEEEEeCC-Ceee---EEee-------eecCCceEEEccC-----CeEEEeec
Q psy12724 72 IMDEHVLKGNSAVLKCHIPSFVADYVAVESWISDQ-GEEL---FVDM-------TESTDGKYLVLPS-----GELHIRDV 135 (167)
Q Consensus 72 ~~~~~v~~G~~a~l~C~~~~~~~~p~p~i~W~k~~-~~~l---~~~~-------~~~~~~r~~~~~~-----g~L~I~~v 135 (167)
+.+..+.+|++|.|+|.+.+. ..+.+.+.|+|++ +... .... .+...+|+.+..+ ..|.|+++
T Consensus 7 p~~~~v~~G~~v~L~C~~~~~-~~~~~~v~W~r~~~g~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~I~~v 85 (210)
T 3d9a_H 7 SGPSLVKPSQTLSLTCSVTGD-SITSDYWSWIRKFPGNRLEYMGYVSYSGSTYYNPSLKSRISITRDTSKNQYYLDLNSV 85 (210)
T ss_dssp ESCSEECTTSCEEEEEEEESS-CGGGSCEEEEEEETTTEEEEEEEECTTSCEEECGGGTTTEEEEEEGGGTEEEEEECSC
T ss_pred CCCEEecCCCcEEEEEEEecc-cCCCCcEEEEEeCCCCCcEEEEEEcCCCCeEECcccCceEEEEecCCCCEEEEEECCC
Confidence 445678899999999999753 1134789999863 1121 1000 0012467776532 28999999
Q ss_pred CcCCCCcceEEEeeecC--cceEEEeee
Q psy12724 136 GPEDGYKSYQCRTKHRL--TGETRLSAT 161 (167)
Q Consensus 136 ~~~D~~G~Y~C~a~n~~--~~~~~l~~~ 161 (167)
+.+|+ |.|.|.|.|.. ...+.|.+.
T Consensus 86 ~~~D~-G~Y~C~~~~~~~~~~~~~l~V~ 112 (210)
T 3d9a_H 86 TTEDT-ATYYCANWDGDYWGQGTLVTVS 112 (210)
T ss_dssp CGGGC-EEEEEEETTSSCBCCCEEEEEC
T ss_pred CcccC-EEEEEEEecCcccccceEEEec
Confidence 99999 99999999863 334566554
No 393
>1sq2_N Novel antigen receptor; immunoglobulin fold, protein-protein complex, hydrolase/immune system complex; 1.45A {Ginglymostoma cirratum} SCOP: b.1.1.1 PDB: 1t6v_N
Probab=99.02 E-value=8.5e-10 Score=75.81 Aligned_cols=76 Identities=24% Similarity=0.368 Sum_probs=52.1
Q ss_pred ecCeEEEeCCcEEEEeeeCCccCCcceeEEEEeCC-CeeeEEeeeecCCceEEEcc-----CCeEEEeecCcCCCCcceE
Q psy12724 72 IMDEHVLKGNSAVLKCHIPSFVADYVAVESWISDQ-GEELFVDMTESTDGKYLVLP-----SGELHIRDVGPEDGYKSYQ 145 (167)
Q Consensus 72 ~~~~~v~~G~~a~l~C~~~~~~~~p~p~i~W~k~~-~~~l~~~~~~~~~~r~~~~~-----~g~L~I~~v~~~D~~G~Y~ 145 (167)
+.+..+.+|++|+|+|.+.+. ..+.+.+.|+|+. +....... ..++|+.+.. +..|.|++++.+|+ |.|.
T Consensus 7 p~~~~v~~G~~v~L~C~~~~~-~~~~~~v~W~r~~~g~~~~~~~--~~~~r~~~~~~~~~~~~~L~I~~~~~~Ds-G~Y~ 82 (113)
T 1sq2_N 7 PRSVTKETGESLTINCVLRDA-SYALGSTCWYRKKSGEGNEESI--SKGGRYVETVNSGSKSFSLRINDLTVEDG-GTYR 82 (113)
T ss_dssp CSEEEECTTCCEEEEEEECSC-SSCCCCEEEEEEETTSCCCEEC--CCBTTEEEEEETTTTEEEEEECSCCGGGC-EEEE
T ss_pred CccEEEecCCCEEEEEEECCC-cCCCCEEEEEEeCCCCCceEeE--EeCCCEEEEEeCCCCEEEEEECCCChhhC-EEEE
Confidence 344678899999999999743 1125679999863 11111011 1346776542 23699999999999 9999
Q ss_pred EEeeec
Q psy12724 146 CRTKHR 151 (167)
Q Consensus 146 C~a~n~ 151 (167)
|.+.|.
T Consensus 83 C~~~~~ 88 (113)
T 1sq2_N 83 CGLGVA 88 (113)
T ss_dssp EEECBT
T ss_pred EEEEeC
Confidence 999983
No 394
>1zvo_C Myeloma immunoglobulin D delta; immunoglobulin fold, antibody, immune system; NMR {Homo sapiens}
Probab=99.02 E-value=1.2e-09 Score=92.83 Aligned_cols=68 Identities=16% Similarity=0.199 Sum_probs=46.9
Q ss_pred eCCcEEEEeeeCCccCCc-ceeEEEEeCCCeeeEEee-----eecCCceEEEccCCeEEEeecCcCCCCcceEEEeeecC
Q psy12724 79 KGNSAVLKCHIPSFVADY-VAVESWISDQGEELFVDM-----TESTDGKYLVLPSGELHIRDVGPEDGYKSYQCRTKHRL 152 (167)
Q Consensus 79 ~G~~a~l~C~~~~~~~~p-~p~i~W~k~~~~~l~~~~-----~~~~~~r~~~~~~g~L~I~~v~~~D~~G~Y~C~a~n~~ 152 (167)
+|+++.|.|.+.+. .| ...|+|+||+ ..+.... ..+.++.|.+ ...|.|..+..+|. |.|+|.|.|..
T Consensus 311 ~g~~~~L~C~v~g~--~P~~~~i~W~k~g-~~~~~~~~~~~~~~~~~gt~~~--~s~L~i~~~~~~d~-g~y~C~a~n~~ 384 (512)
T 1zvo_C 311 LRDKATFTCFVVGS--DLKDAHLTWEVAG-KVPTGGVEEGLLERHSNGSQSQ--HSRLTLPRSLWNAG-TSVTCTLNHPS 384 (512)
T ss_pred cCCceEEEEEEece--ECCCeEEEEEECC-EeccCceeccceecCCCCeEEE--EEEEEEchHHhcCC-CeEEEEEEeCC
Confidence 59999999999864 24 3489999998 3432110 0011223322 23599999999998 99999999986
No 395
>1f2q_A High affinity immunoglobulin epsilon receptor ALP subunit; immunoglobulin fold, glycoprotein, IGE-binding Pro immune system; HET: NAG MAN; 2.40A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 PDB: 1j86_A* 1rpq_A* 2y7q_A* 1f6a_A* 1j88_A* 1j89_A* 1j87_A*
Probab=99.02 E-value=5.7e-10 Score=81.16 Aligned_cols=75 Identities=17% Similarity=0.312 Sum_probs=55.3
Q ss_pred EEEecCeEEEeCCcEEEEeeeCCccCCcce-eEEEEeCCCeeeEEeeeecCCceEEEccCCeEEEeecCcCCCCcceEEE
Q psy12724 69 TVNIMDEHVLKGNSAVLKCHIPSFVADYVA-VESWISDQGEELFVDMTESTDGKYLVLPSGELHIRDVGPEDGYKSYQCR 147 (167)
Q Consensus 69 ~c~~~~~~v~~G~~a~l~C~~~~~~~~p~p-~i~W~k~~~~~l~~~~~~~~~~r~~~~~~g~L~I~~v~~~D~~G~Y~C~ 147 (167)
...+.+..+.+|+++.|.|.+.+ .|.| .++|+|++ ..+. . .++.|.|.+++.+|+ |.|+|.
T Consensus 8 ~~~p~~~~v~~G~~v~L~C~~~~---~~~~~~i~W~~~~-~~~~-------~------~~~~L~i~~v~~~d~-G~Y~C~ 69 (176)
T 1f2q_A 8 SLNPPWNRIFKGENVTLTCNGNN---FFEVSSTKWFHNG-SLSE-------E------TNSSLNIVNAKFEDS-GEYKCQ 69 (176)
T ss_dssp EEESSCSEEETTCCEEEECCTTC---C----CCEEEETT-EECS-------C------CSSEEEECSCCGGGC-EEEEEE
T ss_pred EcCCCCcceecCCcEEEEEeCCC---CCCcceEEEEECC-eECC-------C------CceEEEEeccceecC-EEEEEE
Confidence 33445568899999999999974 3654 58999997 3431 1 267899999999999 999999
Q ss_pred eeecC-cceEEEeee
Q psy12724 148 TKHRL-TGETRLSAT 161 (167)
Q Consensus 148 a~n~~-~~~~~l~~~ 161 (167)
|.|.. +..+.|.+.
T Consensus 70 ~~~~~~s~~~~l~V~ 84 (176)
T 1f2q_A 70 HQQVNESEPVYLEVF 84 (176)
T ss_dssp CTTSSCCCCEEEEEE
T ss_pred cCCccccccEEEEEe
Confidence 99976 455555554
No 396
>1jbj_A CD3 epsilon and gamma ectodomain fragment complex; beta-sheet, C2-SET immunoglobulin superfamily, H-bonded G strand PAIR, single-chain; NMR {Mus musculus} SCOP: b.1.1.4 b.1.1.4 PDB: 1xmw_A
Probab=99.02 E-value=5.1e-10 Score=82.74 Aligned_cols=58 Identities=26% Similarity=0.363 Sum_probs=47.0
Q ss_pred EEEeCCcEEEEeeeCCccCCcceeEEEEeCCCeeeEEeeeecCCceEEEccCCeEEEee-cCcCCCCcceEEEeeecC
Q psy12724 76 HVLKGNSAVLKCHIPSFVADYVAVESWISDQGEELFVDMTESTDGKYLVLPSGELHIRD-VGPEDGYKSYQCRTKHRL 152 (167)
Q Consensus 76 ~v~~G~~a~l~C~~~~~~~~p~p~i~W~k~~~~~l~~~~~~~~~~r~~~~~~g~L~I~~-v~~~D~~G~Y~C~a~n~~ 152 (167)
.+..|+++.|.|.+.+ |.+ ++|+||+ ..+. .. .++.|.|.+ ++.+|+ |.|+|.|.|..
T Consensus 10 v~~~G~~v~L~C~~~~----~~~-i~W~k~g-~~l~------~~------~~~~L~I~~~~~~~D~-G~Y~C~a~n~~ 68 (186)
T 1jbj_A 10 VSISGTSVELTCPLDS----DEN-LKWEKNG-QELP------QK------HDKHLVLQDFSEVEDS-GYYVCYTPASN 68 (186)
T ss_dssp EEEETTEEEEECSSCC----CTT-CEEEETT-EEEC------SC------CCSEEEEESCCTTTSC-EEEEEECSSCC
T ss_pred EEeCCcEEEEEEeCCC----CCc-eEEEECC-EECC------CC------CCCEEEECCCCccccC-EEEEEEEEeCC
Confidence 4578999999999973 333 8999997 4552 11 356899999 999999 99999999985
No 397
>3noi_A Natural cytotoxicity triggering receptor 3; immune system, innate immunity, immunoglobulin-like I2 type natural killer cell activation; HET: 1PG; 1.84A {Homo sapiens} PDB: 3pv6_B*
Probab=99.02 E-value=5.7e-10 Score=77.27 Aligned_cols=77 Identities=32% Similarity=0.493 Sum_probs=52.3
Q ss_pred cCeEEEeCCcEEEEeeeCCccC-CcceeEEEEeCC---CeeeEEeeeecCCceEEEccC--------CeEEEeecCcCCC
Q psy12724 73 MDEHVLKGNSAVLKCHIPSFVA-DYVAVESWISDQ---GEELFVDMTESTDGKYLVLPS--------GELHIRDVGPEDG 140 (167)
Q Consensus 73 ~~~~v~~G~~a~l~C~~~~~~~-~p~p~i~W~k~~---~~~l~~~~~~~~~~r~~~~~~--------g~L~I~~v~~~D~ 140 (167)
....+.+|++|.|+|.+.+... .+.+.+.|+|+. +..+.. ......+|+....+ ..|.|++++.+|+
T Consensus 15 ~~v~v~~G~~v~L~C~~~~~~~~~~~~~v~W~r~~~~~g~~~~~-~~~~~~~R~~~~~~~~~~~~~~~sL~I~~v~~~Ds 93 (120)
T 3noi_A 15 PEIRTLEGSSAFLPCSFNASQGRLAIGSVTWFRDEVVPGKEVRN-GTPEFRGRLAPLASSRFLHDHQAELHIRDVRGHDA 93 (120)
T ss_dssp SEEEEETTSCEEECCEECCCTTSCCCEEEEEEESSCSTTCBCCT-TCTTTTTCEECCCHHHHHTTCBCCEEESSCCGGGC
T ss_pred CEEEEEcCCCEEEEeeecCCCCCCceeEEEEEeccCCCCceecc-cccccCCcEEeecccccccCCcEEEEEecCChhhC
Confidence 3467889999999999864311 125679999975 233211 00113467765422 2799999999999
Q ss_pred CcceEEEeeec
Q psy12724 141 YKSYQCRTKHR 151 (167)
Q Consensus 141 ~G~Y~C~a~n~ 151 (167)
|.|.|.+...
T Consensus 94 -G~Y~C~v~~~ 103 (120)
T 3noi_A 94 -SIYVCRVEVL 103 (120)
T ss_dssp -EEEEEEEEET
T ss_pred -EEEEEEEEEC
Confidence 9999999854
No 398
>1j05_L T84.66 antibody, anti-CEA MAB T84.66, light chain; immunoglobulin, immune system; 1.50A {Mus musculus} SCOP: b.1.1.1 PDB: 1qfw_L* 1qnz_L 3iy3_A 3iy4_A
Probab=99.02 E-value=1.2e-09 Score=74.51 Aligned_cols=75 Identities=20% Similarity=0.317 Sum_probs=51.9
Q ss_pred cCeEEEeCCcEEEEeeeCCccCCc----ceeEEEEeCC-Ce-e--eEEe---eeecCCceEEEccC---CeEEEeecCcC
Q psy12724 73 MDEHVLKGNSAVLKCHIPSFVADY----VAVESWISDQ-GE-E--LFVD---MTESTDGKYLVLPS---GELHIRDVGPE 138 (167)
Q Consensus 73 ~~~~v~~G~~a~l~C~~~~~~~~p----~p~i~W~k~~-~~-~--l~~~---~~~~~~~r~~~~~~---g~L~I~~v~~~ 138 (167)
.+..+.+|++|+|+|.+.+. + .+.+.|+|+. +. + +... ..+...+|+.+..+ ..|.|++++.+
T Consensus 9 ~~~~~~~G~~v~L~C~~~~~---~~~~~~~~v~W~r~~~g~~~~~l~~~~~~~~~~~~~R~~~~~~~~~~~L~I~~v~~~ 85 (111)
T 1j05_L 9 ASLAVSLGQRATMSCRAGES---VDIFGVGFLHWYQQKPGQPPKLLIYRASNLESGIPVRFSGTGSRTDFTLIIDPVEAD 85 (111)
T ss_dssp SEEECCTTSCEEEEEEESSC---CEETTEECEEEEEECTTSCEEEEEETTTEECTTSCTTEEEEEETTEEEEEESSCCGG
T ss_pred CEEEEeCCCCEEEEeecCCC---cccCCCceEEEEEeCCCCCCEEEEEecCcCCCCCCCcEEEEccCCEEEEEECCCCcc
Confidence 34567899999999999743 4 5779999863 11 1 1110 00012457766532 26999999999
Q ss_pred CCCcceEEEeeec
Q psy12724 139 DGYKSYQCRTKHR 151 (167)
Q Consensus 139 D~~G~Y~C~a~n~ 151 (167)
|+ |.|.|.+.|.
T Consensus 86 Ds-G~Y~C~~~~~ 97 (111)
T 1j05_L 86 DV-ATYYCQQTNE 97 (111)
T ss_dssp GC-EEEEEEECSS
T ss_pred cC-EEEEEEEecC
Confidence 99 9999999986
No 399
>1pew_A JTO2, A lambda-6 type immunoglobulin light chain, domain; beta sheet, immune system; 1.60A {Homo sapiens} SCOP: b.1.1.1 PDB: 1cd0_A 1pw3_A 2cd0_A 2w0k_A 3b5g_A 3bdx_A* 2w0l_A
Probab=99.02 E-value=1.9e-09 Score=73.21 Aligned_cols=76 Identities=13% Similarity=0.260 Sum_probs=51.9
Q ss_pred ecCeEEEeCCcEEEEee-eCCccCCc-ceeEEEEeCCCeee-EEee----eecCCceEEEc--cC---CeEEEeecCcCC
Q psy12724 72 IMDEHVLKGNSAVLKCH-IPSFVADY-VAVESWISDQGEEL-FVDM----TESTDGKYLVL--PS---GELHIRDVGPED 139 (167)
Q Consensus 72 ~~~~~v~~G~~a~l~C~-~~~~~~~p-~p~i~W~k~~~~~l-~~~~----~~~~~~r~~~~--~~---g~L~I~~v~~~D 139 (167)
+.+..+.+|++|+|+|. +.+. + .+.+.|+|.+..+. .-.. .+...+|+.+. .+ ..|.|++++.+|
T Consensus 7 p~~~~v~~G~~v~L~C~v~~~~---~~~~~v~W~r~~~~~~~l~~~~~~~~~~~~~R~~~~~~~~~~~~~L~I~~v~~~D 83 (109)
T 1pew_A 7 PHSVSESPGKTVTISCTRSSGN---IASNYVQWYQQRSAPITVIYEDNQRPSGVPDRFAGSIDRSSNSASLTISGLKTED 83 (109)
T ss_dssp CSEEEECTTSCEEEEEEESSSC---GGGSCCEEEEC-CCCEEEEBTTTBCCTTCCTTEEEEEETTTTEEEEEECSCCGGG
T ss_pred CCCEEEcCCCCEEEEEEeCCCC---CCCccEEEEEECCCCcEEEEecCCcCCCCCCcEEEEeccCCCEEEEEECCCChhh
Confidence 34567889999999999 7643 3 47899999762111 1000 00113677765 22 269999999999
Q ss_pred CCcceEEEeeec
Q psy12724 140 GYKSYQCRTKHR 151 (167)
Q Consensus 140 ~~G~Y~C~a~n~ 151 (167)
+ |.|.|.+.|.
T Consensus 84 s-G~Y~C~~~~~ 94 (109)
T 1pew_A 84 E-ADYYCQSYDA 94 (109)
T ss_dssp C-EEEEEEEEET
T ss_pred C-EEEEEEEEeC
Confidence 9 9999999985
No 400
>3sob_L Antibody light chain; beta propeller, protein binding-immune system complex; 1.90A {Homo sapiens} PDB: 1pkq_A 3u1s_L*
Probab=99.01 E-value=6.4e-10 Score=83.84 Aligned_cols=85 Identities=16% Similarity=0.308 Sum_probs=58.0
Q ss_pred ecCeEEEeCCcEEEEeeeCCccCCcceeEEEEeCC-Cee--eEEee----eecCCceEEEc---cCCeEEEeecCcCCCC
Q psy12724 72 IMDEHVLKGNSAVLKCHIPSFVADYVAVESWISDQ-GEE--LFVDM----TESTDGKYLVL---PSGELHIRDVGPEDGY 141 (167)
Q Consensus 72 ~~~~~v~~G~~a~l~C~~~~~~~~p~p~i~W~k~~-~~~--l~~~~----~~~~~~r~~~~---~~g~L~I~~v~~~D~~ 141 (167)
+.+..+.+|+++.|+|.+.+ .|.+.+.|+|++ +.. +.... .....+||.+. .++.|.|++++.+|+
T Consensus 31 p~~~~v~~G~~v~L~C~~~~---~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~D~- 106 (237)
T 3sob_L 31 PSSLSASVGDRVTITCRASQ---DVSTAVAWYQQKPGKAPKLLIYSASFLYSGVPSRFSGSGSGTDFTLTISSLQPEDF- 106 (237)
T ss_dssp CSEEEEETTCCEEEEEEESS---CCTTCEEEEEECTTSCCEEEEETTTEECTTCCTTEEEEEETTEEEEEESSCCGGGC-
T ss_pred CCeEEEeCCCcEEEEEecCC---CCCceEEEEEECCCCCCEEEEEeccccCCCCCCcEEEEcCCCEEEEEECCCChhhC-
Confidence 34568889999999999984 478899999843 111 11000 00124577655 344799999999999
Q ss_pred cceEEEeeecC----cceEEEee
Q psy12724 142 KSYQCRTKHRL----TGETRLSA 160 (167)
Q Consensus 142 G~Y~C~a~n~~----~~~~~l~~ 160 (167)
|.|+|.+.|.. ...+.|.+
T Consensus 107 G~Y~C~~~~~~~~~~~~~~~l~V 129 (237)
T 3sob_L 107 ATYYCQQSYTTPPTFGQGTKVEI 129 (237)
T ss_dssp EEEEEEECSSSSCEECCCEEEEE
T ss_pred eEEEEeeccCCceEEcCcEEEEE
Confidence 99999998854 34445554
No 401
>3esu_F Antibody 14B7* light chain and antibody 14B7* heavy chain linked with A synthetic...; single-chain FV, monoclonal antibody, immunoglobulin; 1.30A {Mus musculus} PDB: 3et9_F 3esv_F 3etb_F 1h8n_A 1h8s_A* 1h8o_A*
Probab=99.01 E-value=9.2e-10 Score=84.11 Aligned_cols=85 Identities=19% Similarity=0.353 Sum_probs=57.6
Q ss_pred cCeEEEeCCcEEEEeeeCCccCCcceeEEEEeCCC-eee--EEee----eecCCceEEEccCC---eEEEeecCcCCCCc
Q psy12724 73 MDEHVLKGNSAVLKCHIPSFVADYVAVESWISDQG-EEL--FVDM----TESTDGKYLVLPSG---ELHIRDVGPEDGYK 142 (167)
Q Consensus 73 ~~~~v~~G~~a~l~C~~~~~~~~p~p~i~W~k~~~-~~l--~~~~----~~~~~~r~~~~~~g---~L~I~~v~~~D~~G 142 (167)
.+..+.+|++|+|+|.+.+ .|.|.+.|+|++. ... .-.. .....+||.+..++ .|.|++++.+|+ |
T Consensus 12 ~~~~v~~G~~v~L~C~~~~---~~~~~i~W~k~~~~~~~~~l~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~D~-G 87 (250)
T 3esu_F 12 SSLSASLGDRVTISCRASQ---DIRNYLNWYQQKPDGTVKLLIYYTSRLQSGVPSRFSGSGSGTDYSLTISNLEQEDI-G 87 (250)
T ss_dssp SEEEECTTCCEEEEEEESS---CCTTCEEEEEECTTSCEEEEEETTTEECTTCCTTEEEEEETTEEEEEESSCCGGGC-E
T ss_pred CEEEeeCCCcEEEEEEecc---cCCceEEEEEECCCCCCEEEEEEeCCCCCCCCCCEEEeCCCCEEEEEEccCChhhC-E
Confidence 3456789999999999984 4788999998531 111 0000 00123567554433 799999999999 9
Q ss_pred ceEEEeeecC----cceEEEeee
Q psy12724 143 SYQCRTKHRL----TGETRLSAT 161 (167)
Q Consensus 143 ~Y~C~a~n~~----~~~~~l~~~ 161 (167)
.|.|.|.|.. +..+.|.+.
T Consensus 88 ~Y~C~~~n~~~~~~~~~~~l~V~ 110 (250)
T 3esu_F 88 TYFCQQGNTLPWTFGGGTKLEIR 110 (250)
T ss_dssp EEEEEECSSSSCEECCCEEEEEC
T ss_pred EEEEEEeeCCCceECCCEEEEEE
Confidence 9999999863 344455553
No 402
>1ugn_A LIR1, leukocyte immunoglobulin-like receptor 1; immunoglobulin-like folds, immune system; 1.80A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 PDB: 3d2u_D* 1g0x_A 1p7q_D 1ufu_A 1vdg_A 2gw5_A 2dyp_D 2otp_A 3q2c_A
Probab=99.01 E-value=2.2e-10 Score=84.92 Aligned_cols=77 Identities=14% Similarity=0.162 Sum_probs=54.7
Q ss_pred eEEEeCCcEEEEeeeCCccCCcceeEEEEeCCCeeeEEeeeecCCceEEEccCCeEEEeecCcCCCCcceEEEeeecC--
Q psy12724 75 EHVLKGNSAVLKCHIPSFVADYVAVESWISDQGEELFVDMTESTDGKYLVLPSGELHIRDVGPEDGYKSYQCRTKHRL-- 152 (167)
Q Consensus 75 ~~v~~G~~a~l~C~~~~~~~~p~p~i~W~k~~~~~l~~~~~~~~~~r~~~~~~g~L~I~~v~~~D~~G~Y~C~a~n~~-- 152 (167)
..+.+|++++|.|.+.+ .|. .++|+|++ ..+... ...+.....++.|.|.+++.+|+ |.|+|.|.|..
T Consensus 14 ~~v~~G~~v~L~C~~~~---~~~-~~~W~k~g-~~~~~~----~~~~~~~~~~~~L~i~~v~~~D~-G~Y~C~a~n~~~g 83 (198)
T 1ugn_A 14 SVITQGSPVTLRCQGGQ---ETQ-EYRLYREK-KTAPWI----TRIPQELVKKGQFPIPSITWEHT-GRYRCYYGSDTAG 83 (198)
T ss_dssp SEEETTCCEEEEEECCT---TCC-CEEEEESS-SCCHHH----HTSCHHHHTTTEEEESSCCGGGC-EEEEEEEEETTTE
T ss_pred CcccCCCcEEEEEEecC---CCc-EEEEEECC-cccccc----ccccccCCcccEEEECCCCHHHC-eEEEEEEECCCCC
Confidence 47889999999999975 354 58999997 344210 11111123567899999999999 99999999964
Q ss_pred ----cceEEEeee
Q psy12724 153 ----TGETRLSAT 161 (167)
Q Consensus 153 ----~~~~~l~~~ 161 (167)
+..+.|.+.
T Consensus 84 ~~~~s~~~~l~V~ 96 (198)
T 1ugn_A 84 RSESSDPLELVVT 96 (198)
T ss_dssp ECCCCCCEEEEEE
T ss_pred cccCCccEEEEEc
Confidence 334555554
No 403
>3auv_A SC-DSFV derived from the G6-FAB; SC-DSFV (disulfide-stabilized SCFV), SCFV, monovalent antibo antibody engineering, immune system; 2.40A {Homo sapiens} PDB: 2kh2_B 3iy0_L
Probab=99.01 E-value=8.1e-10 Score=86.29 Aligned_cols=86 Identities=17% Similarity=0.315 Sum_probs=58.9
Q ss_pred ecCeEEEeCCcEEEEeeeCCccCCcceeEEEEeCCC-e---eeEEe---eeecCCceEEEccCC---eEEEeecCcCCCC
Q psy12724 72 IMDEHVLKGNSAVLKCHIPSFVADYVAVESWISDQG-E---ELFVD---MTESTDGKYLVLPSG---ELHIRDVGPEDGY 141 (167)
Q Consensus 72 ~~~~~v~~G~~a~l~C~~~~~~~~p~p~i~W~k~~~-~---~l~~~---~~~~~~~r~~~~~~g---~L~I~~v~~~D~~ 141 (167)
+.+..+.+|++|+|+|.+.+ .|.|.+.|+|++. . .+... ......+||.+..++ .|.|++++.+|+
T Consensus 19 p~~~~v~~G~~v~L~C~~~~---~p~~~i~W~r~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~Ds- 94 (276)
T 3auv_A 19 PSSLSASVGDRVTITCRASQ---DVSTAVAWYQQKPGKAPKLLIYSASFLYSGVPSRFSGSGSGTDFTLTISSLQPEDF- 94 (276)
T ss_dssp CSEEECCTTCCEEEEEEESS---CCTTCEEEEEECTTSCCEEEEETTTEECTTCCTTEEEEEETTEEEEEESSCCGGGC-
T ss_pred CCeEEEcCCCCEEEEeEcCC---CCCCcEEEEEECCCCCCEEEEEEcCccCCCCCCCEEEeccCCeEEEEEccCChhhC-
Confidence 44567889999999999974 4788999998642 1 11100 000124577766443 799999999999
Q ss_pred cceEEEeeecC----cceEEEeee
Q psy12724 142 KSYQCRTKHRL----TGETRLSAT 161 (167)
Q Consensus 142 G~Y~C~a~n~~----~~~~~l~~~ 161 (167)
|.|.|.|.|.. +..+.|.+.
T Consensus 95 G~Y~C~~~n~~~~~~~~~~~l~V~ 118 (276)
T 3auv_A 95 ATYYCQQHYTTPPTFGCGTKVEIK 118 (276)
T ss_dssp EEEEEEECSSSSCCCCCCEEEEC-
T ss_pred EEEEEEEecCCcccccCCEEEEEe
Confidence 99999999963 334555553
No 404
>1u3h_A T-cell receptor alpha-chain; complex, immune system; 2.42A {Mus musculus} SCOP: b.1.1.1 PDB: 1b88_A 1kj2_A* 1kb5_A 1d9k_A*
Probab=98.57 E-value=3.3e-11 Score=82.41 Aligned_cols=75 Identities=24% Similarity=0.461 Sum_probs=53.1
Q ss_pred cCeEEEeCCcEEEEeeeCCccCCcceeEEEEeCCC-ee---eEEeee---ecCCceEEEcc-----CCeEEEeecCcCCC
Q psy12724 73 MDEHVLKGNSAVLKCHIPSFVADYVAVESWISDQG-EE---LFVDMT---ESTDGKYLVLP-----SGELHIRDVGPEDG 140 (167)
Q Consensus 73 ~~~~v~~G~~a~l~C~~~~~~~~p~p~i~W~k~~~-~~---l~~~~~---~~~~~r~~~~~-----~g~L~I~~v~~~D~ 140 (167)
.+..+.+|++|+|+|.+.+ .+.+.+.|+|++. .. +..... ....+|+.+.. +..|.|++++.+|+
T Consensus 7 ~~v~v~~G~~v~L~C~~~~---~~~~~v~W~r~~~g~~~~~l~~~~~~~~~~~~~R~~~~~~~~~~~~~L~I~~v~~~Ds 83 (110)
T 1u3h_A 7 QSLTVWEGETAILNCSYEN---SAFDYFPWYQQFPGEGPALLISILSVSDKKEDGRFTIFFNKREKKLSLHIADSQPGDS 83 (110)
Confidence 4567889999999999974 3677899998641 11 110000 01346776653 24799999999999
Q ss_pred CcceEEEeeec
Q psy12724 141 YKSYQCRTKHR 151 (167)
Q Consensus 141 ~G~Y~C~a~n~ 151 (167)
|.|.|.+.|.
T Consensus 84 -G~Y~C~~~~~ 93 (110)
T 1u3h_A 84 -ATYFCAASAN 93 (110)
Confidence 9999999986
No 405
>1nkr_A P58-CL42 KIR; inhibitory receptor, natural killer cells, immunological receptors, immunoglobulin fold; 1.70A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 PDB: 1m4k_A 1efx_D 2dli_A 2dl2_A 3h8n_A
Probab=99.01 E-value=5.4e-10 Score=83.17 Aligned_cols=68 Identities=10% Similarity=0.043 Sum_probs=49.6
Q ss_pred eEEEeCCcEEEEeeeCCccCCcceeEEEEeCCCeeeEEeeeecCCceEEE-ccCCeEEEeecCcCCCCcceEEEeeec
Q psy12724 75 EHVLKGNSAVLKCHIPSFVADYVAVESWISDQGEELFVDMTESTDGKYLV-LPSGELHIRDVGPEDGYKSYQCRTKHR 151 (167)
Q Consensus 75 ~~v~~G~~a~l~C~~~~~~~~p~p~i~W~k~~~~~l~~~~~~~~~~r~~~-~~~g~L~I~~v~~~D~~G~Y~C~a~n~ 151 (167)
..+.+|++++|.|.+.+ |.+.++|+|++ ..+.+.. ...++.. ..++.|.|.+++.+|+ |.|+|.|.|.
T Consensus 17 ~~v~~G~~v~L~C~~~~----~~~~~~w~k~g-~~~~~~~---~~~~~~~~~~~~~l~I~~v~~~D~-G~Y~C~a~~~ 85 (201)
T 1nkr_A 17 PLVKSEETVILQCWSDV----MFEHFLLHREG-MFNDTLR---LIGEHHDGVSKANFSISRMTQDLA-GTYRCYGSVT 85 (201)
T ss_dssp SEEETTCCEEEEEEESS----CCSEEEEEEES-SSCEEEE---EECEEETTEEEEEEEESSCCGGGC-EEEEEEEEBT
T ss_pred CccCCCCcEEEEEeccC----CCCEEEEEECC-CcCCcce---eeeecCCCCceEEEEeccCCcccC-eEEEEeEecC
Confidence 56789999999999962 67789999997 3443211 0111111 1356899999999999 9999999864
No 406
>1ypz_F T-cell receptor gamma chain, beta-2-microglobulin; H2-T22 protein, T cell receptor delta, immune system; HET: NAG MAN FUC; 3.40A {Mus musculus} SCOP: b.1.1.1 b.1.1.2
Probab=99.01 E-value=6.4e-09 Score=79.24 Aligned_cols=130 Identities=14% Similarity=0.177 Sum_probs=81.9
Q ss_pred eeEEeEEEEEeCCcEEEEeecCCCCCCcceeeEEeeCC-Cc---eee-----------e-cCCc------------eE--
Q psy12724 14 EAQVYDVFVIKGNAAVFKCNLPSFVSDHLDVVSWADTD-GG---QYQ-----------I-DNQD------------FV-- 63 (167)
Q Consensus 14 ~~~~~~~~v~~G~~~~l~C~a~~~~~~~~~~i~W~k~~-~~---~~~-----------~-~~~~------------~v-- 63 (167)
...|..+.+.+|+++.|.|.+.+...+ .+.+.|+|.+ ++ .+. . ...| .+
T Consensus 5 ~q~p~~v~~~~G~~v~L~C~~~~~~~~-~~~v~W~r~~~~~~~~~l~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~~L~I 83 (230)
T 1ypz_F 5 EQPEISISRPRDETAQISCKVFIESFR-SVTIHWYRQKPNQGLEFLLYVLATPTHIFLDKEYKKMEASKNPSASTSILTI 83 (230)
T ss_dssp ECSCSEEEEETTSCEEEEEEECCGGGG-GCCEEEEEECTTTCCEEEEEECSSCCCEEEESSSSEEEEEECCTTTEEEEEE
T ss_pred cccCCEEEEeCCCcEEEEEEeeccccC-ccEEEEEEECCCCCCEEEEEEecCCeeecCcccCCeEEEEEcCCCCEEEEEE
Confidence 445778999999999999999875211 2469998753 21 110 0 0011 11
Q ss_pred ------EEeeeEEEecCe--------------EEE-------------------------eCCcEEEEeeeCCccCCcc-
Q psy12724 64 ------VSQSYTVNIMDE--------------HVL-------------------------KGNSAVLKCHIPSFVADYV- 97 (167)
Q Consensus 64 ------~~g~y~c~~~~~--------------~v~-------------------------~G~~a~l~C~~~~~~~~p~- 97 (167)
.+|.|.|.+.+. .|. .|+.+.|.|.+.++ .|.
T Consensus 84 ~~v~~~D~G~Y~C~~~~~~~~~~~~~~~~~~L~V~~~~~~l~~~~~p~~~v~~p~~~~v~~g~~~~L~C~~~g~--~P~~ 161 (230)
T 1ypz_F 84 YSLEEEDEAIYYCSYGEGSSGFHKVFAEGTKLIVIPSDKRLDADISPKPTIFLPSVAETNLHKTGTYLCLLEAF--FPDV 161 (230)
T ss_dssp CSCCGGGCSEEEEEECCTTTCCCCEECSCEEEEEECCCTTCCSCCSCCCCEECCCHHHHHHHSCEEEEEEEEEE--SSCC
T ss_pred CcCChhhCEEEEEEEECCCCCcccccCCCEEEEEecccccCcccCCCCceEECCCchhhccCCcceEEEEEeee--cCCC
Confidence 169999987531 121 26789999999754 254
Q ss_pred eeEEEEe-CCCeeeEEee---eecCCceEEEccCCeEEEeecCcCCCCcceEEEeeecC
Q psy12724 98 AVESWIS-DQGEELFVDM---TESTDGKYLVLPSGELHIRDVGPEDGYKSYQCRTKHRL 152 (167)
Q Consensus 98 p~i~W~k-~~~~~l~~~~---~~~~~~r~~~~~~g~L~I~~v~~~D~~G~Y~C~a~n~~ 152 (167)
+.++|+| |+ ..+.... ....++.|.+. ..|.|.+... | |.|+|.|.|..
T Consensus 162 ~~v~W~~~~g-~~l~~~~~~~~~~~~~~~~~~--s~L~i~~~~~-~--~~ytC~v~~~~ 214 (230)
T 1ypz_F 162 IRVYWKEKDG-NTILDSQEGDTLKTNDTYMKF--SWLTVPERAM-G--KEHRCIVKHEN 214 (230)
T ss_dssp CEEEEECTTS-SCBCCCEECCCEEETTEEEEE--EEEEECGGGT-T--SCEEEEEECSS
T ss_pred eEEEEEccCC-eEccccccceeecCCCCEEEE--EEEEEEhhhC-C--CEEEEEEEECC
Confidence 5899999 55 4442111 00123444332 3699998886 4 89999999986
No 407
>1svz_A Immunoglobulin;, single-chain FV fragment 1696; antibody-antigen complex, HIV inhibiting antibody; 1.89A {Mus musculus} PDB: 1jp5_A
Probab=99.01 E-value=1.5e-09 Score=82.86 Aligned_cols=86 Identities=20% Similarity=0.250 Sum_probs=58.0
Q ss_pred ecCeEEEeCCcEEEEeeeCCccCCc-----ceeEEEEeCC-Ceee--EEee----eecCCceEEEccC---CeEEEeecC
Q psy12724 72 IMDEHVLKGNSAVLKCHIPSFVADY-----VAVESWISDQ-GEEL--FVDM----TESTDGKYLVLPS---GELHIRDVG 136 (167)
Q Consensus 72 ~~~~~v~~G~~a~l~C~~~~~~~~p-----~p~i~W~k~~-~~~l--~~~~----~~~~~~r~~~~~~---g~L~I~~v~ 136 (167)
+.+..+.+|++|+|+|.+.+. | .+.+.|+|++ +..+ .... .....+|+.+..+ ..|.|++++
T Consensus 8 p~~~~v~~G~~v~L~C~~~~~---~~~~~~~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~ 84 (247)
T 1svz_A 8 PLYLPVSLGDQASISCRSSQT---IVHNNGNTYLEWYLQKPGQSPQLLIYKVSNRFSGVPDRFSGSGSGTDFTLKISRVE 84 (247)
T ss_dssp CSEEEECTTCCEEEEEEESSC---CBCTTSCBCEEEEEECTTSCEEEEEETTTEECTTCCTTEEEEEETTEEEEEESSCC
T ss_pred CCeEEecCCCCEEEEEeCCCc---ccccCCCceEEEEEECCCCCceEEEEEecccCCCCCCcEEeccCCCEEEEEECCCC
Confidence 345678899999999999753 5 5889999853 1111 1100 0011457766533 279999999
Q ss_pred cCCCCcceEEEeeecC----cceEEEeee
Q psy12724 137 PEDGYKSYQCRTKHRL----TGETRLSAT 161 (167)
Q Consensus 137 ~~D~~G~Y~C~a~n~~----~~~~~l~~~ 161 (167)
.+|+ |.|.|.|.|.. +..+.|.+.
T Consensus 85 ~~D~-G~Y~C~~~n~~~~~~~~~~~l~V~ 112 (247)
T 1svz_A 85 AEDL-GIYYCFQGSHFPPTFGGGTKLEIK 112 (247)
T ss_dssp GGGC-EEEEEEECSSSSCEECCCEEEEEC
T ss_pred HHHC-EEEEEEEccCCccEECCCEEEEEE
Confidence 9999 99999999973 334555553
No 408
>1q0x_L FAB 9B1, light chain; anti-morphine antibody, FAB fragment, immune system; HET: PG4; 1.60A {Mus musculus} SCOP: b.1.1.1 b.1.1.2 PDB: 1q0y_L* 1ngp_L* 1ngq_L 3ks0_L* 1gig_L 2vir_A 2vis_A* 2vit_A 1sm3_L 4a6y_L 1ind_L* 1ine_L* 1yuh_L* 2zpk_L 3rhw_K* 3ri5_K* 3ria_K* 3rif_K* 1mfe_L* 1mfb_L* ...
Probab=99.00 E-value=9.2e-10 Score=81.98 Aligned_cols=85 Identities=16% Similarity=0.214 Sum_probs=57.5
Q ss_pred ecCeEEEeCCcEEEEeeeCCccCCc---ceeEEEEeCC-CeeeEE-ee-----eecCCceEEEccCC---eEEEeecCcC
Q psy12724 72 IMDEHVLKGNSAVLKCHIPSFVADY---VAVESWISDQ-GEELFV-DM-----TESTDGKYLVLPSG---ELHIRDVGPE 138 (167)
Q Consensus 72 ~~~~~v~~G~~a~l~C~~~~~~~~p---~p~i~W~k~~-~~~l~~-~~-----~~~~~~r~~~~~~g---~L~I~~v~~~ 138 (167)
+.+..+.+|++|.|+|.+.+. | .|.++|+|++ +..+.. .+ .....+|+.+..++ .|.|.+++.+
T Consensus 7 p~~~~v~~G~~v~L~C~~~~~---~~~~~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~ 83 (212)
T 1q0x_L 7 ESALTTSPGETVTLTCRSSTG---AVTTSNYANWVQEKPDHLFTGLIGGTNNRAPGVPARFSGSLIGDKAALTITGAQTE 83 (212)
T ss_dssp CSEEEECTTCCEEEEEEESSS---CCCGGGCCEEEEEETTTEEEEEEETTTEECTTCCTTEEEEEETTEEEEEESSCCGG
T ss_pred CCeEeecCCCCEEEEEEeccc---ccCCCCeEEEEEeCCCCCceEEEEcCcccCCcccccEEEEeeCCEEEEEECCCCcc
Confidence 455678899999999999753 4 4789999863 122110 00 00123567655432 7999999999
Q ss_pred CCCcceEEEeeecC----cceEEEee
Q psy12724 139 DGYKSYQCRTKHRL----TGETRLSA 160 (167)
Q Consensus 139 D~~G~Y~C~a~n~~----~~~~~l~~ 160 (167)
|+ |.|.|.|.|.. +..+.|.+
T Consensus 84 D~-G~Y~C~~~~~~~~~~~~~~~l~V 108 (212)
T 1q0x_L 84 DE-AIYFCALWSNNKLVFGGGTKLTV 108 (212)
T ss_dssp GC-EEEEEEEECSSCEEECCCEEEEE
T ss_pred CC-EEEEEEEecCchhhcCCCeEEEE
Confidence 99 99999999975 23345554
No 409
>3uzq_A Anti-dengue MAB 4E11; dengue antibody neutralization, immune system; HET: MES; 1.60A {Mus musculus} PDB: 3uze_A* 3uyp_A* 3uzv_B 1dzb_A
Probab=99.00 E-value=1.8e-09 Score=82.94 Aligned_cols=89 Identities=20% Similarity=0.247 Sum_probs=59.1
Q ss_pred EecCeEEEeCCcEEEEeeeCCccCCcceeEEEEeC-CCeeeEE-----------eeeecCCceEEEccCC-----eEEEe
Q psy12724 71 NIMDEHVLKGNSAVLKCHIPSFVADYVAVESWISD-QGEELFV-----------DMTESTDGKYLVLPSG-----ELHIR 133 (167)
Q Consensus 71 ~~~~~~v~~G~~a~l~C~~~~~~~~p~p~i~W~k~-~~~~l~~-----------~~~~~~~~r~~~~~~g-----~L~I~ 133 (167)
.+.+..+.+|++|+|+|.+.+. ..+.+.+.|+|. .+..+.. ...+...+|+.+..++ .|.|+
T Consensus 7 ~p~~~~v~~G~~v~L~C~~~g~-~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~I~ 85 (253)
T 3uzq_A 7 QSGAELVKPGASVRLSCTASGF-NIKDTYMSWVKQRPEQGLEWIGRIDPANGDTKYDPKFQGKATITADTSSNTAYLHLS 85 (253)
T ss_dssp ECCCEEECTTCCEEEEEEECSS-CGGGSCEEEEEECTTCCEEEEEEEETTTTEEEECGGGTTTEEEEEETTTTEEEEEEC
T ss_pred cCCCeeecCCCcEEEEEEeeCC-cccCceEEEEEeCCCCCCEEEEEEccCCCcceeCCcCCCcEEEEeecCCCeEEEEeC
Confidence 3456778899999999999753 124778999983 2112110 0001123577766433 39999
Q ss_pred ecCcCCCCcceEEEeeecC----cceEEEeee
Q psy12724 134 DVGPEDGYKSYQCRTKHRL----TGETRLSAT 161 (167)
Q Consensus 134 ~v~~~D~~G~Y~C~a~n~~----~~~~~l~~~ 161 (167)
+++.+|+ |.|.|.|.|.. ...+.|.+.
T Consensus 86 ~v~~~Ds-G~Y~C~~~~~~~~~~~~~~~l~V~ 116 (253)
T 3uzq_A 86 SLTSGDT-AVYYCSRGWEGFAYWGQGTLVTVS 116 (253)
T ss_dssp SCCGGGC-EEEEEEECSSSCCEECCCEEEEEC
T ss_pred CCCcccC-EEEEEEEeeCCccEECCCcEEEEe
Confidence 9999999 99999999843 334555554
No 410
>1neu_A Myelin P0 protein; structural protein, glycoprotein, transmembrane, phosphorylation, immunoglobulin fold, signal; 1.90A {Rattus norvegicus} SCOP: b.1.1.1
Probab=99.00 E-value=2e-09 Score=73.96 Aligned_cols=87 Identities=15% Similarity=0.199 Sum_probs=56.1
Q ss_pred CeEEEeCCcEEEEeeeCCc-cCCcceeEEEEeCCCe---e--eEEee--------eecCCceEEEc-----cCCeEEEee
Q psy12724 74 DEHVLKGNSAVLKCHIPSF-VADYVAVESWISDQGE---E--LFVDM--------TESTDGKYLVL-----PSGELHIRD 134 (167)
Q Consensus 74 ~~~v~~G~~a~l~C~~~~~-~~~p~p~i~W~k~~~~---~--l~~~~--------~~~~~~r~~~~-----~~g~L~I~~ 134 (167)
...+.+|++|.|+|.+... .+.+.+.+.|+|++.. . +.... .+...+|+.+. .++.|.|++
T Consensus 8 ~v~~~~G~~v~L~C~~~~~~~~~~~~~v~W~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~sL~I~~ 87 (124)
T 1neu_A 8 EVYGAVGSQVTLHCSFWSSEWVSDDISFTWRYQPEGGRDAISIFHYAKGQPYIDEVGTFKERIQWVGDPSWKDGSIVIHN 87 (124)
T ss_dssp EEEEETTSCEEECCEEECSSCCCSCCEEEEEEEETTCCCCEEEEEEETTEEEECSSSTTTTCEEECCBGGGTBCCEEECS
T ss_pred eEEEEeCCeEEEEeEEeCCCCCCCceEEEEEEcCCCCCceEEEEEecCCeeccccCccccCcEEEecCCcCCeEEEEEcc
Confidence 4578899999999997421 1225678999986421 1 21110 00114677664 246899999
Q ss_pred cCcCCCCcceEEEeeecC-----cceEEEeee
Q psy12724 135 VGPEDGYKSYQCRTKHRL-----TGETRLSAT 161 (167)
Q Consensus 135 v~~~D~~G~Y~C~a~n~~-----~~~~~l~~~ 161 (167)
++.+|+ |.|.|.+.|.. ...+.|.+.
T Consensus 88 v~~~D~-G~Y~C~v~~~~~~~~~~~~v~L~V~ 118 (124)
T 1neu_A 88 LDYSDN-GTFTCDVKNPPDIVGKTSQVTLYVF 118 (124)
T ss_dssp CCGGGC-EEEEEEEEC----CCEEEEEEEEEE
T ss_pred CChhhC-EEEEEEEEcCCCCcCcEeeEEEEEe
Confidence 999999 99999999864 234556553
No 411
>2znx_A SCFV; fluorotryptohpan, 5-fluorotryptophan, 19F, single chain FV, allergen, antimicrobial, bacteriolytic enzyme, glycosidase, hydrolase; HET: FTR 1PG; 2.30A {Homo sapiens} PDB: 2znw_A*
Probab=99.00 E-value=1.1e-09 Score=83.82 Aligned_cols=85 Identities=22% Similarity=0.261 Sum_probs=58.2
Q ss_pred ecCeEEEeCCcEEEEeeeCCccCCcceeEEEEeCCC-ee--eEEee----eecCCceEEEccC---CeEEEeecCcCCCC
Q psy12724 72 IMDEHVLKGNSAVLKCHIPSFVADYVAVESWISDQG-EE--LFVDM----TESTDGKYLVLPS---GELHIRDVGPEDGY 141 (167)
Q Consensus 72 ~~~~~v~~G~~a~l~C~~~~~~~~p~p~i~W~k~~~-~~--l~~~~----~~~~~~r~~~~~~---g~L~I~~v~~~D~~ 141 (167)
+.+..+.+|++|+|+|.+.+ .|.|.+.|+|++. .. +.-.. .....+|+.+..+ ..|.|.+++.+|+
T Consensus 8 p~~~~v~~G~~v~L~C~~~~---~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~D~- 83 (242)
T 2znx_A 8 PATLSVTPGNSVSLSCRASQ---SIGNNLHXYQQKSHESPRLLIKYASQSISGIPSRFSGSGSGTDFTLSINSVETEDF- 83 (242)
T ss_dssp CSEEEECTTCCEEEEEEESS---CCTTCEEEEEECTTSCCEEEEETTTEECTTSCTTEEEEEETTEEEEEESSCCGGGC-
T ss_pred CCeEEEcCCCcEEEEEEeCC---CCCceEEEEEeCCCCCceEEEEeccccCCCCCCCEEEecCCCEEEEEECCCChHHC-
Confidence 44567889999999999974 4788999998531 11 11000 0012457766532 3799999999999
Q ss_pred cceEEEeeecC----cceEEEee
Q psy12724 142 KSYQCRTKHRL----TGETRLSA 160 (167)
Q Consensus 142 G~Y~C~a~n~~----~~~~~l~~ 160 (167)
|.|.|.|.|.. +..+.|.+
T Consensus 84 G~Y~C~~~n~~~~~~~~~~~L~V 106 (242)
T 2znx_A 84 GMYFCQQSNSXPYTFGGGTKLEI 106 (242)
T ss_dssp EEEEEEECSSSSCEECCCEEEEE
T ss_pred EEEEEeEecCCceEECCCEEEEE
Confidence 99999999974 23445554
No 412
>3gkz_A Anti-methamphetamine single chain FV; therapeutic antibody, MDMA, IGG, immune system; HET: B40; 1.90A {Mus musculus} PDB: 3gm0_A* 1rvf_L 3ab0_C 2a0l_C 3iy5_A
Probab=99.00 E-value=1.5e-09 Score=83.49 Aligned_cols=78 Identities=18% Similarity=0.253 Sum_probs=54.1
Q ss_pred ecCeEEEeCCcEEEEeeeCCccCCcceeEEEEeCC-Cee--eEEee--------eecCCceEEEccCC-----eEEEeec
Q psy12724 72 IMDEHVLKGNSAVLKCHIPSFVADYVAVESWISDQ-GEE--LFVDM--------TESTDGKYLVLPSG-----ELHIRDV 135 (167)
Q Consensus 72 ~~~~~v~~G~~a~l~C~~~~~~~~p~p~i~W~k~~-~~~--l~~~~--------~~~~~~r~~~~~~g-----~L~I~~v 135 (167)
+.+..+.+|++|+|.|.+.+. ..|.+.+.|+|.. +.. +.... .+...+|+.+..++ .|.|+++
T Consensus 15 p~~~~v~~G~~v~L~C~~~~~-~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~I~~v 93 (257)
T 3gkz_A 15 SGPSLVKPSQTLSLTCSVTGD-SVTSGYWSWIRQFPGNKLDYMGYISYRGSTYYNPSLKSRISITRDTSKNQVYLQLKSV 93 (257)
T ss_dssp ECCSEECTTCCEEEEEEEEES-CCSSCEEEEEEECTTSCEEEEEEEETTCCEEECTTTTTTEEEEEEGGGTEEEEEECSC
T ss_pred CCCeEEcCCCcEEEEEEEEcc-cccceEEEEEEECCCCCcEEEEEEecCCcEEecccccccEEEEEecCCceEEEEECCC
Confidence 345678899999999999753 1257889999842 111 11000 01123577766433 6999999
Q ss_pred CcCCCCcceEEEeeec
Q psy12724 136 GPEDGYKSYQCRTKHR 151 (167)
Q Consensus 136 ~~~D~~G~Y~C~a~n~ 151 (167)
+.+|+ |.|.|.|.|.
T Consensus 94 ~~~Ds-G~Y~C~~~n~ 108 (257)
T 3gkz_A 94 SSEDT-ATYYCSYFDS 108 (257)
T ss_dssp CGGGC-EEEEEEEECT
T ss_pred ChhhC-EEEEEEEecC
Confidence 99999 9999999997
No 413
>2d9c_A Signal-regulatory protein beta-1; beta-sandwich, SIRP-beta-1, CD172B antigen, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.00 E-value=1.3e-09 Score=76.90 Aligned_cols=75 Identities=23% Similarity=0.395 Sum_probs=50.8
Q ss_pred CeEEEeCCcEEEEeeeCCccCCcceeEEEEeCCCee--eEEeeeecCCceEEEcc--------CCeEEEeecCcCCCCcc
Q psy12724 74 DEHVLKGNSAVLKCHIPSFVADYVAVESWISDQGEE--LFVDMTESTDGKYLVLP--------SGELHIRDVGPEDGYKS 143 (167)
Q Consensus 74 ~~~v~~G~~a~l~C~~~~~~~~p~p~i~W~k~~~~~--l~~~~~~~~~~r~~~~~--------~g~L~I~~v~~~D~~G~ 143 (167)
+..+.+|++|+|+|.+.+. .|.+.+.|+|+++.. +.........+|+.... +..|.|++++.+|+ |.
T Consensus 17 ~~~v~~G~~v~L~C~~~~~--~~~~~v~W~r~~~~~~~~i~~~~~~~~~r~~~~~~~~~~~~~~~~L~I~~v~~~Ds-G~ 93 (136)
T 2d9c_A 17 SVSVAAGESATLRCAMTSL--IPVGPIMWFRGAGAGRELIYNQKEGHFPRVTTVSELTKRNNLDFSISISNITPADA-GT 93 (136)
T ss_dssp EEEEETTSCEEECCEESCC--CSCCCCEEEETTTSSCEEEEESSSCCCSSBCCSSCSSSSSCCBCCEEESSCCTTTC-EE
T ss_pred EEEEcCCCCEEEEEEEcCC--CCCceEEEEeecCCCeEEEEEcCCCcccceeeeeeeccCCCCEEEEEECCCCHHHC-EE
Confidence 4678899999999999742 245689999986322 21111000013443221 34799999999999 99
Q ss_pred eEEEeeec
Q psy12724 144 YQCRTKHR 151 (167)
Q Consensus 144 Y~C~a~n~ 151 (167)
|.|.+.|.
T Consensus 94 Y~C~~~~~ 101 (136)
T 2d9c_A 94 YYCVKFRK 101 (136)
T ss_dssp EEEEEEEC
T ss_pred EEEEEEeC
Confidence 99999875
No 414
>2v9r_A Roundabout homolog 1; proto-oncogene, differentiation, phosphorylation, disease MU neuronal development, immunoglobulin domain, chemotaxis; 2.00A {Homo sapiens} PDB: 2v9q_A
Probab=99.00 E-value=1.5e-09 Score=80.21 Aligned_cols=79 Identities=24% Similarity=0.381 Sum_probs=55.9
Q ss_pred eEEEecCeEEEeCCcEEEEeeeCCccCCcceeEEEEeCCCeeeEEeeeecCCceEEEccCCeEEE-----eecCcCCCCc
Q psy12724 68 YTVNIMDEHVLKGNSAVLKCHIPSFVADYVAVESWISDQGEELFVDMTESTDGKYLVLPSGELHI-----RDVGPEDGYK 142 (167)
Q Consensus 68 y~c~~~~~~v~~G~~a~l~C~~~~~~~~p~p~i~W~k~~~~~l~~~~~~~~~~r~~~~~~g~L~I-----~~v~~~D~~G 142 (167)
+.-.+.+..+.+|+++.|.|.+.+ .|.|.++|+|++ ..+.... .....+.....+|.+.+ .+++.+|+ |
T Consensus 12 i~~~p~~~~v~~G~~v~l~C~~~~---~p~~~v~W~~~~-~~~~~~~-~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~-G 85 (212)
T 2v9r_A 12 IVEHPSDLIVSKGEPATLNCKAEG---RPTPTIEWYKGG-ERVETDK-DDPRSHRMLLPSGSLFFLRIVHGRKSRPDE-G 85 (212)
T ss_dssp EEECCCCEEECTTCCEEECCEEEE---ESCCEEEEEETT-EECCCTT-TCTTCSEEECTTSCEEESSCCCCSSCCCSC-E
T ss_pred eecCCCceEEeCCCcEEEEEEcCC---CCCCEEEEEECC-EEeeccc-cccccceEEecCCcEEEEEEEecCCCcccC-e
Confidence 444456778899999999999974 588899999997 4543210 00112344556666554 45699999 9
Q ss_pred ceEEEeeecC
Q psy12724 143 SYQCRTKHRL 152 (167)
Q Consensus 143 ~Y~C~a~n~~ 152 (167)
.|+|.|.|..
T Consensus 86 ~Y~C~~~n~~ 95 (212)
T 2v9r_A 86 VYVCVARNYL 95 (212)
T ss_dssp EEEEEEEETT
T ss_pred EEEEEEECCC
Confidence 9999999975
No 415
>1eeq_A Kappa-4 immunoglobulin (light chain); protein stability, hydrogen bonds, immune system; 1.50A {Homo sapiens} SCOP: b.1.1.1 PDB: 1eeu_A 1lve_A 2lve_A 3lve_A 5lve_A 4lve_A 1efq_A 1qac_A 1ek3_A 2imm_A 1mvu_A 2ap2_A 1ap2_A 3bd3_A* 3bd4_A* 3bd5_A* 2imn_A 3dus_A* 3duu_A* 3dv4_A* ...
Probab=98.99 E-value=1.7e-09 Score=74.03 Aligned_cols=76 Identities=20% Similarity=0.279 Sum_probs=52.3
Q ss_pred cCeEEEeCCcEEEEeeeCCccCCc------ceeEEEEeCC-Ce-e--eEEee---eecCCceEEEccCC---eEEEeecC
Q psy12724 73 MDEHVLKGNSAVLKCHIPSFVADY------VAVESWISDQ-GE-E--LFVDM---TESTDGKYLVLPSG---ELHIRDVG 136 (167)
Q Consensus 73 ~~~~v~~G~~a~l~C~~~~~~~~p------~p~i~W~k~~-~~-~--l~~~~---~~~~~~r~~~~~~g---~L~I~~v~ 136 (167)
.+..+.+|++|.|+|.+.+. + .+.+.|+|.. +. + +.... .+...+|+.+..++ .|.|++++
T Consensus 9 ~~v~v~~G~~v~L~C~~~~~---~~~~~~~~~~v~W~r~~~~~~~~~l~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~ 85 (114)
T 1eeq_A 9 DSLAVSLGERATINCKSSQS---VLDSSNSKNYLAWYQQKPGQPPKLLIYWASTRESGVPDRFSGSGSGTDFTLTISSLQ 85 (114)
T ss_dssp SEEEECTTSCEEEEEEESSC---CEETTTTEECEEEEEECTTSCCEEEEETTTEECTTCCTTEEEEEETTEEEEEESSCC
T ss_pred CeEEEcCCCeEEEEEEcCCC---ccccccCCccEEEEEECCCCCCEEEEEecCccCCCCCCCEEEeecCCEEEEEECCCC
Confidence 44678899999999999743 3 3789999863 11 1 21100 00124677665322 69999999
Q ss_pred cCCCCcceEEEeeecC
Q psy12724 137 PEDGYKSYQCRTKHRL 152 (167)
Q Consensus 137 ~~D~~G~Y~C~a~n~~ 152 (167)
.+|+ |.|.|.+.|..
T Consensus 86 ~~Ds-G~Y~C~~~~~~ 100 (114)
T 1eeq_A 86 AEDV-AVYYCQQYYSH 100 (114)
T ss_dssp GGGC-EEEEEEECSSS
T ss_pred cccC-EEEEEEEeeCC
Confidence 9999 99999999853
No 416
>2edo_A CD48 antigen; beta-sandwich, IG-fold, B-lymphocyte activation marker blast-1, BCM1 surface antigen, leukocyte antigen MEM-102, TCT.1; NMR {Homo sapiens}
Probab=98.99 E-value=1.8e-09 Score=75.14 Aligned_cols=75 Identities=19% Similarity=0.238 Sum_probs=53.3
Q ss_pred eEEEeCCcEEEEeeeCCccCCcceeEEEEeCCCeeeEEee-------eecCCceEEEc-cCCeEEEeecCcCCCCcceEE
Q psy12724 75 EHVLKGNSAVLKCHIPSFVADYVAVESWISDQGEELFVDM-------TESTDGKYLVL-PSGELHIRDVGPEDGYKSYQC 146 (167)
Q Consensus 75 ~~v~~G~~a~l~C~~~~~~~~p~p~i~W~k~~~~~l~~~~-------~~~~~~r~~~~-~~g~L~I~~v~~~D~~G~Y~C 146 (167)
..+.+|++|+|+|.... ..+...+.|+|+....+.... .+.-.+|+.+. .+|.|.|+|++.+|+ |.|.|
T Consensus 14 v~~~~G~~VtL~c~~~~--~~~~~~i~W~~~~~~~i~~~~~~~~~~~~~~f~~R~~l~~~~~sL~I~nv~~~Ds-G~Y~c 90 (121)
T 2edo_A 14 MTVVSGSNVTLNISESL--PENYKQLTWFYTFDQKIVEWDSRKSKYFESKFKGRVRLDPQSGALYISKVQKEDN-STYIM 90 (121)
T ss_dssp CEEETTSCEEECCSSCC--CSSEEEEEEEEETTEEEEEECSSCEEECSCTTTTTCEECTTTCCEEESSCCGGGC-SEEEE
T ss_pred EEEEeCCCEEEeCCCCC--CCceeEEEEEcCCCCeEEEEECcCCeEeChhcCCcEEEeCCCceEEEeCCCHHHC-eEEEE
Confidence 57889999999998731 234678999997632332110 01113466665 678999999999999 99999
Q ss_pred EeeecC
Q psy12724 147 RTKHRL 152 (167)
Q Consensus 147 ~a~n~~ 152 (167)
.+.|..
T Consensus 91 ~v~~~~ 96 (121)
T 2edo_A 91 RVLKKT 96 (121)
T ss_dssp EEEETT
T ss_pred EEEcCC
Confidence 998754
No 417
>4ffy_L DENV1-E111 single chain variable fragment (light; viral envelope proteins, structural genomics, antibody epito flavivirus, niaid; 2.50A {Mus musculus}
Probab=98.99 E-value=2.1e-09 Score=75.13 Aligned_cols=86 Identities=19% Similarity=0.279 Sum_probs=57.8
Q ss_pred cCeEEEeCCcEEEEeeeCCccCCc----ceeEEEEeCCC--ee--eEEe---eeecCCceEEEccC---CeEEEeecCcC
Q psy12724 73 MDEHVLKGNSAVLKCHIPSFVADY----VAVESWISDQG--EE--LFVD---MTESTDGKYLVLPS---GELHIRDVGPE 138 (167)
Q Consensus 73 ~~~~v~~G~~a~l~C~~~~~~~~p----~p~i~W~k~~~--~~--l~~~---~~~~~~~r~~~~~~---g~L~I~~v~~~ 138 (167)
....+.+|++|+|+|.+.+. + .+.+.|+|... .+ +... ..+...+||.+..+ ..|.|++++.+
T Consensus 9 ~~v~v~~G~~v~L~C~~~~~---~~~~~~~~v~W~r~~~~~~~~~l~~~~~~~~~~~~~r~~~~~~~~~~sL~I~~v~~~ 85 (126)
T 4ffy_L 9 ASLAVSLGQRATISCRASES---VDHYGNSFIYWYQQKPGQPPKLLIYLASNLESGVPARFSGSGSETDFTLTIDSVETD 85 (126)
T ss_dssp SEEEEETTSCEEEEEEESSC---CEETTEECEEEEEECTTSCCEEEEETTTEECTTSCTTEEEEEETTEEEEEESSCCGG
T ss_pred CeEEEeCCCCEEEEEecCCC---cccCCCceEEEEEECCCCCCEEEEEEcCccCCCCCCcEEEecCCCEEEEEECCCCHH
Confidence 34678899999999999743 4 56789998531 11 1110 00112456765432 26999999999
Q ss_pred CCCcceEEEeeecC----cceEEEeeeC
Q psy12724 139 DGYKSYQCRTKHRL----TGETRLSATK 162 (167)
Q Consensus 139 D~~G~Y~C~a~n~~----~~~~~l~~~~ 162 (167)
|+ |.|.|.+.|.. ..-++|.+.+
T Consensus 86 Ds-G~Y~C~~~~~~~~~fg~gT~L~V~~ 112 (126)
T 4ffy_L 86 DA-ATYYCQQNNEDPYTFGGGTKLEIKG 112 (126)
T ss_dssp GC-EEEEEEECSSSSCEECCCEEEEEEC
T ss_pred HC-EEEEEEEecCCCcEECCCEEEEEec
Confidence 99 99999999854 4456776654
No 418
>3jz7_A MCAR, CAR, coxsackievirus and adenovirus receptor homolog; cell adhesion molecule, immunoglobuline superfamily, alternative splicing, cell adhesion; 2.19A {Mus musculus} PDB: 3mj7_B* 2npl_X
Probab=98.99 E-value=1.8e-09 Score=79.59 Aligned_cols=78 Identities=17% Similarity=0.285 Sum_probs=52.6
Q ss_pred CeEEEeCCcEEEEeeeCCccCC-cceeEEEEeCCCe------eeEEee--------eecCCceEEEcc------CCeEEE
Q psy12724 74 DEHVLKGNSAVLKCHIPSFVAD-YVAVESWISDQGE------ELFVDM--------TESTDGKYLVLP------SGELHI 132 (167)
Q Consensus 74 ~~~v~~G~~a~l~C~~~~~~~~-p~p~i~W~k~~~~------~l~~~~--------~~~~~~r~~~~~------~g~L~I 132 (167)
...+.+|+++.|+|.+.+.... ..+.++|+|++.. .+.... .+...+|+.+.. ++.|.|
T Consensus 9 ~v~v~~G~~v~L~C~~~~~~~~~~~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~L~i 88 (214)
T 3jz7_A 9 RIEKAKGETAYLPCKFTLSPEDQGPLDIEWLISPSDNQIVDQVIILYSGDKIYDNYYPDLKGRVHFTSNDVKSGDASINV 88 (214)
T ss_dssp EEEEETTSCEEECCBCCCCTTCCSCCEEEEEEEESSSSCCSEEEEEEETTEEECCCCGGGTTTEEESCSCGGGTBCCEEE
T ss_pred eEEEecCCCEEEEEEEecCCCCCCcEEEEEEecCCCCCCCceEEEEEeCCeEccccCCccccceEEeccCccCCcccEEE
Confidence 4567899999999999753110 0468999984311 111000 001245666654 467999
Q ss_pred eecCcCCCCcceEEEeeecC
Q psy12724 133 RDVGPEDGYKSYQCRTKHRL 152 (167)
Q Consensus 133 ~~v~~~D~~G~Y~C~a~n~~ 152 (167)
.+++.+|+ |.|+|.|.|..
T Consensus 89 ~~v~~~D~-G~Y~C~~~~~~ 107 (214)
T 3jz7_A 89 TNLQLSDI-GTYQCKVKKAP 107 (214)
T ss_dssp CSCCGGGC-EEEEEEEEETT
T ss_pred ccCChhhC-eEEEEEEEeCC
Confidence 99999999 99999999975
No 419
>1nqb_A Single-chain antibody fragment; multivalent antibody, diabody, domain SWA immunoglobulin; 2.00A {Mus musculus} SCOP: b.1.1.1 b.1.1.1 PDB: 1lmk_A 1qnz_H
Probab=98.99 E-value=1.5e-09 Score=84.05 Aligned_cols=78 Identities=19% Similarity=0.299 Sum_probs=54.3
Q ss_pred ecCeEEEeCCcEEEEeeeCCccCCcceeEEEEeCC-Ceee--EEee---------eecCCceEEEccC-----CeEEEee
Q psy12724 72 IMDEHVLKGNSAVLKCHIPSFVADYVAVESWISDQ-GEEL--FVDM---------TESTDGKYLVLPS-----GELHIRD 134 (167)
Q Consensus 72 ~~~~~v~~G~~a~l~C~~~~~~~~p~p~i~W~k~~-~~~l--~~~~---------~~~~~~r~~~~~~-----g~L~I~~ 134 (167)
+.+..+.+|++|+|+|.+.+. ..+.+.+.|+|++ +..+ .... .....+|+.+..+ +.|.|++
T Consensus 7 p~~~~v~~G~~v~L~C~~~g~-~~~~~~v~W~r~~~~~~~~~l~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~~L~I~~ 85 (256)
T 1nqb_A 7 SGAELVKPGASVKLSCKASGY-TFTSYWMHWVKQRPGRGLEWIGRIDPNSGGTKYNEKFKSKATLTVDKPSSTAYMQLSS 85 (256)
T ss_dssp CCCEEECTTCCEEEEEEECSS-CGGGSCEEEEEEETTTEEEEEEEECTTTCCEEECGGGTTTEEEEEETTTTEEEEEECS
T ss_pred CCCeeecCCCcEEEEEEeccc-cCCCceEEEEEECCCCCcEEEEEEecCCCceeeCcccCCeEEEEEecCCCEEEEEECc
Confidence 345678899999999999753 1136789999853 1111 1110 0012467776542 3799999
Q ss_pred cCcCCCCcceEEEeeec
Q psy12724 135 VGPEDGYKSYQCRTKHR 151 (167)
Q Consensus 135 v~~~D~~G~Y~C~a~n~ 151 (167)
++.+|+ |.|.|.|.|.
T Consensus 86 v~~~Ds-G~Y~C~~~n~ 101 (256)
T 1nqb_A 86 LTSEDS-AVYYCARYDY 101 (256)
T ss_dssp CCGGGC-EEEEEEECCT
T ss_pred CChhhC-EEEEEEEeec
Confidence 999999 9999999997
No 420
>3sbw_C Programmed cell death 1 ligand 1; PD-1, PD-L1, B7-H1, programmed death-1 ligand 1, complex, costimulatory, immune system; 2.28A {Homo sapiens} PDB: 3fn3_A 3bis_A 3bik_A
Probab=98.98 E-value=2.3e-09 Score=79.98 Aligned_cols=84 Identities=17% Similarity=0.232 Sum_probs=54.9
Q ss_pred eEEEeCCcEEEEeeeCCccC--CcceeEEEEeCCCeeeEEeee---------ecCCceEEEccC------CeEEEeecCc
Q psy12724 75 EHVLKGNSAVLKCHIPSFVA--DYVAVESWISDQGEELFVDMT---------ESTDGKYLVLPS------GELHIRDVGP 137 (167)
Q Consensus 75 ~~v~~G~~a~l~C~~~~~~~--~p~p~i~W~k~~~~~l~~~~~---------~~~~~r~~~~~~------g~L~I~~v~~ 137 (167)
..+.+|+++.|+|.+.+... ...+.++|+|++ ..+..... ....+|..+..+ ..|.|.+++.
T Consensus 11 v~~~~G~~v~L~C~~~~~p~~~~~~~~v~W~~~~-~~v~~~~~g~~~~~~~~~~~~~r~~~~~~~~~~~~~~L~I~~v~~ 89 (222)
T 3sbw_C 11 YVVEYGSNMTIECKFPVEKQLDLAALIVYWEMED-KNIIQFVHGEEDLKVQHSSYRQRARLLKDQLSLGNAALQITDVKL 89 (222)
T ss_dssp EEEETTSCEEEEEECCCCSSCCTTTCEEEEEETT-EEEEEEETTEECSSSSCGGGSSSEEECHHHHTTTEEEEEESSCCG
T ss_pred EEEEcCCcEEEEeEecCCCCCCCccEEEEEEECC-cEEEEEeCCccccccccccccCceEEccccccCCEEEEEEcCccc
Confidence 46788999999999864310 013489999986 33322110 001256666543 3799999999
Q ss_pred CCCCcceEEEeeecC--cceEEEee
Q psy12724 138 EDGYKSYQCRTKHRL--TGETRLSA 160 (167)
Q Consensus 138 ~D~~G~Y~C~a~n~~--~~~~~l~~ 160 (167)
+|+ |.|+|.|.|.. ...+.|.+
T Consensus 90 ~D~-G~Y~C~~~~~~~~~~~~~l~V 113 (222)
T 3sbw_C 90 QDA-GVYRCMISYGGADYKRITVKV 113 (222)
T ss_dssp GGC-EEEEEEEESSSEEEEEEEEEE
T ss_pred ccC-eEEEEEEEeCCCceeEEEEEE
Confidence 999 99999999933 23344444
No 421
>3tf7_C 42F3 MUT7 SCFV (42F3 alpha chain, linker, 42F3 BE; IG and MHC, antigen recognition, TCR-PMHC, membrane receptor system; 2.75A {Mus musculus}
Probab=98.98 E-value=8e-10 Score=85.31 Aligned_cols=86 Identities=16% Similarity=0.178 Sum_probs=58.1
Q ss_pred cCeEEEeCCcEEEEeeeCCccCCcceeEEEEeCC-Cee---eEEee----eecCCceEEEc-----cCCeEEEeecCcCC
Q psy12724 73 MDEHVLKGNSAVLKCHIPSFVADYVAVESWISDQ-GEE---LFVDM----TESTDGKYLVL-----PSGELHIRDVGPED 139 (167)
Q Consensus 73 ~~~~v~~G~~a~l~C~~~~~~~~p~p~i~W~k~~-~~~---l~~~~----~~~~~~r~~~~-----~~g~L~I~~v~~~D 139 (167)
.+..+.+|++|+|+|.+.+ .|.|.+.|+|.. +.. +.... .....+||.+. .++.|.|++++.+|
T Consensus 11 ~~~~v~~G~~v~L~C~~~~---~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~sL~I~~v~~~D 87 (256)
T 3tf7_C 11 ARVTVSEGASLQLRCKYSY---SATPYLFWYVQYPRQGPQMLLKYYSGDPVVQGVNGFEAEFSKSDSSFHLRKASVHRSD 87 (256)
T ss_dssp SEEEEETTSCEEECCEEEC---SSCCEEEEEEECTTSCCEEEEEECSSCSEEECSTTCEEEEETTTTEEEEEESSCCGGG
T ss_pred ceEEecCCCeEEEEEEeCC---CCCceEEEEEECCCCCeEEEEEEccCCcccccCCCeEEEEcCCCCEEEEEECCCCccc
Confidence 4567889999999999974 488899999842 111 11000 00124566652 23469999999999
Q ss_pred CCcceEEEeeecC-------cceEEEeeeC
Q psy12724 140 GYKSYQCRTKHRL-------TGETRLSATK 162 (167)
Q Consensus 140 ~~G~Y~C~a~n~~-------~~~~~l~~~~ 162 (167)
+ |.|.|.|.|.. ...+.|.+.+
T Consensus 88 s-G~Y~C~~~~~~~~~~~~~~~~~~l~V~~ 116 (256)
T 3tf7_C 88 S-AVYFCAVSAKGTGSKLSFGKGAKLTVSP 116 (256)
T ss_dssp C-SEEEEEEECTTCTTCEEECCCEEEEEEC
T ss_pred C-EEEEEEEecCCCccceEECCCeEEEEeC
Confidence 9 99999999863 3345666654
No 422
>2wbj_D OB TCR; transmembrane, immune response, T cell receptor, MHC II, MEM receptor, molecular mimicry, multiple sclerosis, immune SYS autoimmunity; HET: NAG BMA MAN; 3.00A {Homo sapiens}
Probab=98.98 E-value=4.1e-09 Score=82.37 Aligned_cols=75 Identities=16% Similarity=0.250 Sum_probs=54.1
Q ss_pred ecCeEEEeCCcEEEEeeeCCccCCcceeEEEEeCCC-ee---eEEeee--------ecCCceEEEccC----CeEEEeec
Q psy12724 72 IMDEHVLKGNSAVLKCHIPSFVADYVAVESWISDQG-EE---LFVDMT--------ESTDGKYLVLPS----GELHIRDV 135 (167)
Q Consensus 72 ~~~~~v~~G~~a~l~C~~~~~~~~p~p~i~W~k~~~-~~---l~~~~~--------~~~~~r~~~~~~----g~L~I~~v 135 (167)
+.+..+.+|++|.|+|.+.+ .|.+.++|+|++. .. +..... ....+|+.+..+ ..|.|+++
T Consensus 31 p~~v~v~~G~~v~L~C~~~~---~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~sL~I~~v 107 (279)
T 2wbj_D 31 PSWVISKSGTSVKIECRSLD---FQATTMFWYRQFPKQSLMLMATSNEGSKATYEQGVEKDKFLINHASLTLSTLTVTSA 107 (279)
T ss_dssp CSEEEEETTSCEEEEEEESS---SCEEEEEEEEECSSSCCEEEEEEESSSCCCCCSSSCSSSEEEEECSSSEEEEEESSC
T ss_pred CCeEEecCCCeEEEEEEeCC---CCCCeEEEEEeCCCCCeEEEEEEecCCcceecCCccCCcEEEEeCCCCEEEEEEccC
Confidence 45578899999999999964 4788999998641 11 110000 012467777642 37999999
Q ss_pred CcCCCCcceEEEeee
Q psy12724 136 GPEDGYKSYQCRTKH 150 (167)
Q Consensus 136 ~~~D~~G~Y~C~a~n 150 (167)
+.+|+ |.|.|.+.|
T Consensus 108 ~~~D~-G~Y~C~~~~ 121 (279)
T 2wbj_D 108 HPEDS-SFYICSARD 121 (279)
T ss_dssp CGGGC-EEEEEEEEE
T ss_pred CccCC-EEEEEEEcc
Confidence 99999 999999999
No 423
>3nl4_H Antigen binding fragment,immunoglobulin IGG - HEA; FAB, rabbit, conformation-specific, amyloid, immune system; 1.54A {Oryctolagus cuniculus} PDB: 4hbc_H
Probab=98.98 E-value=1.8e-09 Score=80.85 Aligned_cols=88 Identities=19% Similarity=0.327 Sum_probs=58.5
Q ss_pred ecCeEEEeCCcEEEEeeeCCccCCcceeEEEEeCC-Ceee--EEee--------eecCCceEEEccCC---eEEEeecCc
Q psy12724 72 IMDEHVLKGNSAVLKCHIPSFVADYVAVESWISDQ-GEEL--FVDM--------TESTDGKYLVLPSG---ELHIRDVGP 137 (167)
Q Consensus 72 ~~~~~v~~G~~a~l~C~~~~~~~~p~p~i~W~k~~-~~~l--~~~~--------~~~~~~r~~~~~~g---~L~I~~v~~ 137 (167)
+.+..+.+|++|+|+|.+.+. ..+.+.+.|+|.. +... .-.. .+...+|+.+..++ .|.|++++.
T Consensus 6 p~~~~v~~G~~v~L~C~~~~~-~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~ 84 (215)
T 3nl4_H 6 SGGRLVTPGTPLTLACTVSGF-SLNTYSMFWVRQAPGKGLQWIGIISNFGVIYYATWAKGRFTISKTSTTVDLKITSPTT 84 (215)
T ss_dssp ECCCEECTTCCEEEEEEEESS-CTTTCCEEEEEECTTSCEEEEEEECTTCCEEECGGGTTTEEEEECSSEEEEEESSCCG
T ss_pred CCCEEEcCCCcEEEEEEecCc-ccCCCeEEEEEECCCCCeEEEEEEecCCccccCCcccCCEEEEeeCCEEEEEECCCCc
Confidence 445678899999999999643 2246789998743 1111 1000 00124677766543 499999999
Q ss_pred CCCCcceEEEeeec-------CcceEEEeee
Q psy12724 138 EDGYKSYQCRTKHR-------LTGETRLSAT 161 (167)
Q Consensus 138 ~D~~G~Y~C~a~n~-------~~~~~~l~~~ 161 (167)
+|+ |.|.|.+.|. ....+.|.+.
T Consensus 85 ~D~-G~Y~C~~~~~~~~~~~~~~~~~~l~V~ 114 (215)
T 3nl4_H 85 EDT-ATYFCVRKYGSEWGGDLWGPGTLVTVS 114 (215)
T ss_dssp GGC-EEEEEEEECSSSSCEEEECCCEEEEEC
T ss_pred ccC-EEEEEEEecCCCccceEEcCCEEEEEe
Confidence 999 9999999987 3344556554
No 424
>3nfj_J T cell receptor beta chain; immunoglobulin family, immune system; 2.68A {Homo sapiens} PDB: 3hg1_E
Probab=98.98 E-value=1.2e-09 Score=83.31 Aligned_cols=75 Identities=13% Similarity=0.105 Sum_probs=52.2
Q ss_pred ecCeEEEeCCcEEEEeeeCCccCCcceeEEEEeCC-Ceee--EEeee------ecCCceEEEcc----CCeEEEeecCcC
Q psy12724 72 IMDEHVLKGNSAVLKCHIPSFVADYVAVESWISDQ-GEEL--FVDMT------ESTDGKYLVLP----SGELHIRDVGPE 138 (167)
Q Consensus 72 ~~~~~v~~G~~a~l~C~~~~~~~~p~p~i~W~k~~-~~~l--~~~~~------~~~~~r~~~~~----~g~L~I~~v~~~ 138 (167)
+.+..+.+|++|+|+|.+.+ .|.+.+.|+|.. +... .-... +...+|+.+.. +..|.|++++.+
T Consensus 8 p~~v~v~~G~~v~L~C~~~~---~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~sL~I~~v~~~ 84 (245)
T 3nfj_J 8 PATLVQPVGSPLSLECTVEG---TSNPNLYWYRQAAGRGLQLLFYSVGIGQISSEVPQNLSASRPQDRQFILSSKKLLLS 84 (245)
T ss_dssp CSEEEEETTCCEEEEEEEES---CSSCEEEEEEESTTSCEEEEEEESSTTCCBCSSCCSSEEEEEETTEEEEEESSCCGG
T ss_pred CceEEecCCCCEEEEEEecC---CCCceEEEEEECCCCCcEEEEEECCCcccCCccCCcEEEEecCCCEEEEEECCCChh
Confidence 34567889999999999974 488899999832 1111 10000 01135665553 237999999999
Q ss_pred CCCcceEEEeee
Q psy12724 139 DGYKSYQCRTKH 150 (167)
Q Consensus 139 D~~G~Y~C~a~n 150 (167)
|+ |.|.|.+.|
T Consensus 85 D~-G~Y~C~~~~ 95 (245)
T 3nfj_J 85 DS-GFYLCAWSV 95 (245)
T ss_dssp GC-EEEEEEEEC
T ss_pred hC-EEEEEEEee
Confidence 99 999999999
No 425
>1nfd_E H57 FAB; complex (immunoreceptor-immunoglobulin), complex (immunorece immunoglobulin) complex; HET: NAG NDG; 2.80A {Mus musculus} SCOP: b.1.1.1 b.1.1.2
Probab=98.98 E-value=1.1e-09 Score=81.60 Aligned_cols=75 Identities=16% Similarity=0.297 Sum_probs=52.8
Q ss_pred ecCeEEEeCCcEEEEeeeCCccCCcceeEEEEeCC-CeeeEEee------eecCCceEEEccC---CeEEEeecCcCCCC
Q psy12724 72 IMDEHVLKGNSAVLKCHIPSFVADYVAVESWISDQ-GEELFVDM------TESTDGKYLVLPS---GELHIRDVGPEDGY 141 (167)
Q Consensus 72 ~~~~~v~~G~~a~l~C~~~~~~~~p~p~i~W~k~~-~~~l~~~~------~~~~~~r~~~~~~---g~L~I~~v~~~D~~ 141 (167)
+.+..+.+|++|.|.|.+.+ .|.|.++|+|++ +..+.... .....+|+.+..+ ..|.|.+++.+|+
T Consensus 6 p~~~~v~~G~~v~L~C~~~~---~~~~~v~W~k~~~g~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~D~- 81 (212)
T 1nfd_E 6 PSSASVTVGETVKITCSGDQ---LPKNFAYWFQQKSDKNILLLIYMDNKRPSGIPERFSGSTSGTTATLTISGAQPEDE- 81 (212)
T ss_dssp CSEEEEETTSCCCEEEEETT---GGGSCCEEEEECTTCCEEEEEBTTTBCCTTSCTTEEEEEETTEEEEEETTCCGGGC-
T ss_pred CCeEEEeCCCcEEEEEecCC---CCCCeEEEEEECCCCCcEEEEEeccccCCCccccEEEEeeCCEEEEEECcCCcccC-
Confidence 34567889999999999874 477789999853 22221000 0011356766532 3799999999999
Q ss_pred cceEEEeee
Q psy12724 142 KSYQCRTKH 150 (167)
Q Consensus 142 G~Y~C~a~n 150 (167)
|.|+|.|.|
T Consensus 82 G~Y~C~~~n 90 (212)
T 1nfd_E 82 AAYYCLSSY 90 (212)
T ss_dssp SEEEEEEEE
T ss_pred EEEEEEEEc
Confidence 999999997
No 426
>1q9r_B S25-2 FAB (IGG1K) heavy chain; antigen-binding fragment, anti-carbohydrate, anti-LPS, antibody, immunoglobulin, KDO, complex, immune system; HET: KDA KDO; 1.45A {Mus musculus} SCOP: b.1.1.1 b.1.1.2 PDB: 1q9l_B 1q9k_B* 1q9q_B* 1q9v_B* 2r1w_B* 2r1x_B* 2r1y_B* 2r2b_B* 2r2e_B* 2r2h_B* 3bpc_B* 3sy0_B* 3t4y_B* 3t65_B* 2r23_B* 1q9t_B* 3t77_B* 3okl_B* 3okk_B* 3okm_B ...
Probab=98.98 E-value=1.5e-09 Score=81.64 Aligned_cols=78 Identities=23% Similarity=0.349 Sum_probs=53.4
Q ss_pred ecCeEEEeCCcEEEEeeeCCccCCcceeEEEEeCC-Cee---eEEee----------eecCCceEEEccC-----CeEEE
Q psy12724 72 IMDEHVLKGNSAVLKCHIPSFVADYVAVESWISDQ-GEE---LFVDM----------TESTDGKYLVLPS-----GELHI 132 (167)
Q Consensus 72 ~~~~~v~~G~~a~l~C~~~~~~~~p~p~i~W~k~~-~~~---l~~~~----------~~~~~~r~~~~~~-----g~L~I 132 (167)
+.+..+.+|++|.|+|.+.+. ..+.+.+.|+|++ +.. +.... .+...+|+.+..+ +.|.|
T Consensus 7 p~~~~v~~G~~v~L~C~~~~~-~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~~L~I 85 (222)
T 1q9r_B 7 SGGGLVQSGGSLRLSCATSGF-TFTDYYMSWVRQPPGKALEWLGFIRNKANGYTTEYSPSVKGRFTISRDNSQSILYLQM 85 (222)
T ss_dssp ECCCEECTTCCEEEEEEEESS-CGGGSCEEEEEECTTSCCEEEEEECCGGGTTCEEECTTTBTTEEEEEETTTTEEEEEE
T ss_pred CCceeEcCCCEEEEEEEecCc-cCCCCcEEEEEECCCCCcEEEEEEccCCcccccccCcccCCceEEEEECCCCeEEEEE
Confidence 345678899999999999743 1126789999853 111 11000 0011367777642 37999
Q ss_pred eecCcCCCCcceEEEeeec
Q psy12724 133 RDVGPEDGYKSYQCRTKHR 151 (167)
Q Consensus 133 ~~v~~~D~~G~Y~C~a~n~ 151 (167)
++++.+|+ |.|.|.+.|.
T Consensus 86 ~~v~~~D~-G~Y~C~~~~~ 103 (222)
T 1q9r_B 86 NTLRAEDS-ATYYCARDHD 103 (222)
T ss_dssp CSCCGGGC-EEEEEEECCC
T ss_pred CcCCcccC-eEEEEEEecc
Confidence 99999999 9999999985
No 427
>3r0n_A Poliovirus receptor-related protein 2; IG-domain, cell-adhesion molecule, virus entry receptor, STR genomics, PSI-biology; 1.30A {Homo sapiens} PDB: 4dfh_A 4dfi_A
Probab=98.98 E-value=5.8e-10 Score=77.52 Aligned_cols=77 Identities=17% Similarity=0.388 Sum_probs=49.9
Q ss_pred CeEEEeCCcEEEEeeeCCccCC-cceeEEEEeCCC----eee--E-----Eeeee--cCCceEEEccCC-----------
Q psy12724 74 DEHVLKGNSAVLKCHIPSFVAD-YVAVESWISDQG----EEL--F-----VDMTE--STDGKYLVLPSG----------- 128 (167)
Q Consensus 74 ~~~v~~G~~a~l~C~~~~~~~~-p~p~i~W~k~~~----~~l--~-----~~~~~--~~~~r~~~~~~g----------- 128 (167)
+..+.+|++|.|+|.+.+.... ....+.|+|+.. ..+ . ..... ...+|+.+..++
T Consensus 11 ~v~~~~G~~v~L~C~~~~~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~g~~~~~~~ 90 (128)
T 3r0n_A 11 EVRGQLGGTVELPCHLLPPVPGLYISLVTWQRPDAPANHQNVAAFHPKMGPSFPSPKPGSERLSFVSAKQSTGQDTEAEL 90 (128)
T ss_dssp EEECCTTSCEEECCEEESCCTTCEEEEEEEECTTSCGGGCEEEEEETTTEEECCSSSSCGGGEEESSCBCCCSTTCCCBC
T ss_pred eEEEEcCCCEEEEEEeecCCCCCcEEEEEEEEeCCCCCCeeEEEEecccCcccccccccCCcEEEeccccccccccccCC
Confidence 3567789999999998642111 123789999631 011 1 00000 023677766553
Q ss_pred ---eEEEeecCcCCCCcceEEEeeec
Q psy12724 129 ---ELHIRDVGPEDGYKSYQCRTKHR 151 (167)
Q Consensus 129 ---~L~I~~v~~~D~~G~Y~C~a~n~ 151 (167)
.|.|++++.+|+ |.|.|.+.+.
T Consensus 91 ~~~sL~I~~v~~~D~-G~Y~C~v~~~ 115 (128)
T 3r0n_A 91 QDATLALHGLTVEDE-GNYTCEFATF 115 (128)
T ss_dssp SBCCEEECSCCGGGC-EEEEEEEEEE
T ss_pred CCeEEEEccCCchhC-eEEEEEEEeC
Confidence 899999999999 9999987654
No 428
>4ei6_B Vbeta16 XV19 type II natural killer T cell recept variable domain, human constant...; natural killer T cell receptor, immune system; 1.60A {Mus musculus} PDB: 4ei5_D 4elk_B 4elm_F* 2esv_E 3ffc_E 3utt_E 3utp_E* 3uts_E 3qjf_B 3qjh_B 3qiw_D* 3qiu_D
Probab=98.97 E-value=4.6e-09 Score=79.95 Aligned_cols=74 Identities=18% Similarity=0.312 Sum_probs=50.5
Q ss_pred ecCeEEEeCCcEEEEeeeCCccCCcceeEEEEeC--CCee-eEEee-------eecC-CceEEEccCC----eEEEeecC
Q psy12724 72 IMDEHVLKGNSAVLKCHIPSFVADYVAVESWISD--QGEE-LFVDM-------TEST-DGKYLVLPSG----ELHIRDVG 136 (167)
Q Consensus 72 ~~~~~v~~G~~a~l~C~~~~~~~~p~p~i~W~k~--~~~~-l~~~~-------~~~~-~~r~~~~~~g----~L~I~~v~ 136 (167)
+.+..+.+|++|+|+| .. +.|.+.+.|+|. +... +.-.. .... .+|+.+..++ .|.|++++
T Consensus 9 p~~v~v~~G~~v~L~C-~~---~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~sL~I~~v~ 84 (245)
T 4ei6_B 9 PSHQIIDMGQMVTLNC-DP---VSNHLYFYWYKQILGQQMEFLVNFYNGKVMEKSKLFKDQFSVERPDGSYFTLKIQPTA 84 (245)
T ss_dssp CSEEEEETTCCEEEEE-EC---CTTCCEEEEEEEETTTEEEEEEEEETTEEEEECTTCCTTEEEECCTTSCEEEEECSCC
T ss_pred CceEEecCCCCEEEEE-Ec---CCCCCEEEEEEECCCCCcEEEEEECCCceeccCCCccCCEEEEeccCceEEEEECCCC
Confidence 3456788999999999 43 347889999982 1111 00000 0001 1778776532 79999999
Q ss_pred cCCCCcceEEEeee
Q psy12724 137 PEDGYKSYQCRTKH 150 (167)
Q Consensus 137 ~~D~~G~Y~C~a~n 150 (167)
.+|+ |.|.|.+.+
T Consensus 85 ~~D~-G~Y~C~~~~ 97 (245)
T 4ei6_B 85 LEDS-AVYFCASSF 97 (245)
T ss_dssp GGGC-EEEEEEEEC
T ss_pred HhHC-EEEEEEEcc
Confidence 9999 999999995
No 429
>4frw_A Poliovirus receptor-related protein 4; immunoglobulin-like domain, IG domain, viral entry receptor, adhesion; 3.50A {Homo sapiens}
Probab=98.97 E-value=1.9e-09 Score=79.18 Aligned_cols=77 Identities=19% Similarity=0.318 Sum_probs=51.5
Q ss_pred CeEEEeCCcEEEEeeeCCccCCcceeEEEEeCCCeeeEEe----e--------eecCCceEEEcc------CCeEEEeec
Q psy12724 74 DEHVLKGNSAVLKCHIPSFVADYVAVESWISDQGEELFVD----M--------TESTDGKYLVLP------SGELHIRDV 135 (167)
Q Consensus 74 ~~~v~~G~~a~l~C~~~~~~~~p~p~i~W~k~~~~~l~~~----~--------~~~~~~r~~~~~------~g~L~I~~v 135 (167)
+..|.+|++|.|+|.+.+....+.+.|+|+|++. .+... . .+...+|+.... ++.|.|+++
T Consensus 8 ~vtv~~G~~v~L~C~v~~~~~~~~~~V~W~k~~~-~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~sL~I~~v 86 (218)
T 4frw_A 8 VVTVVLGQDAKLPCFYRGDSGEQVGQVAWARVDA-GEGAQELALLHSKYGLHVSPAYEGRVEQPPPPRNPLDGSVLLRNA 86 (218)
T ss_dssp EEEEETTSCEEECCEECCCTTCEEEEEEEEEECS-SSCEEEEEEEETTTEEEECGGGTTTEECCSSCCCTTBCCEEESSC
T ss_pred eEEEEcCCCEEEEEEEEcCCCCCccEEEEEECCC-CCCceeEEEecCCCCeEeCccccceEEEecccccCCeEEEEEeec
Confidence 4678899999999999754222235689999863 22110 0 001123343322 357999999
Q ss_pred CcCCCCcceEEEeeecC
Q psy12724 136 GPEDGYKSYQCRTKHRL 152 (167)
Q Consensus 136 ~~~D~~G~Y~C~a~n~~ 152 (167)
+.+|+ |.|.|.+.|..
T Consensus 87 ~~~D~-G~Y~C~~~~~~ 102 (218)
T 4frw_A 87 VQADE-GEYECRVSTFP 102 (218)
T ss_dssp CGGGC-EEEEEEEEEET
T ss_pred cHHHC-CceeEEEEecc
Confidence 99999 99999998865
No 430
>1pz5_B Heavy chain of FAB (SYA/J6); antibody-antigen structure, peptide-carbohydrate mimicry, VA design, immune system; 1.80A {Mus musculus} SCOP: b.1.1.1 b.1.1.2 PDB: 1m7d_B* 1m71_B* 1m7i_B* 1r24_B 1uz6_F 1uz8_B* 1clz_H*
Probab=98.97 E-value=2.3e-09 Score=80.46 Aligned_cols=88 Identities=18% Similarity=0.259 Sum_probs=58.5
Q ss_pred ecCeEEEeCCcEEEEeeeCCccCCcceeEEEEeCC-Cee---eEEeee----------ecCCceEEEcc---CC--eEEE
Q psy12724 72 IMDEHVLKGNSAVLKCHIPSFVADYVAVESWISDQ-GEE---LFVDMT----------ESTDGKYLVLP---SG--ELHI 132 (167)
Q Consensus 72 ~~~~~v~~G~~a~l~C~~~~~~~~p~p~i~W~k~~-~~~---l~~~~~----------~~~~~r~~~~~---~g--~L~I 132 (167)
+.+..+.+|++|.|+|.+.+. ..+.+.+.|+|++ +.. +..... +...+|+.+.. ++ .|.|
T Consensus 7 p~~~~~~~G~~v~L~C~~~~~-~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~~L~I 85 (220)
T 1pz5_B 7 SGGGLVQPGGSMKLSCVASGF-TFSNYWMEWVRQSPEKGLEWVAEIRLKSNNYATHYAESVKGRFTISRDDSKSSVYLQM 85 (220)
T ss_dssp ECCEEECTTCCEEEEEEEESS-CGGGSEEEEEEEETTTEEEEEEEECCGGGTTCEEECGGGTTTEEEEEEGGGTEEEEEE
T ss_pred cCCEEEcCCCeEEEEEEEcCC-ccCCccEEEEEeCCCCCcEEEEEEEcCCCccccccCcccCCcEEEEEeCCCCeEEEEE
Confidence 445678899999999999743 1126789999863 111 111100 00136777653 23 8999
Q ss_pred eecCcCCCCcceEEEeeecC------cceEEEeee
Q psy12724 133 RDVGPEDGYKSYQCRTKHRL------TGETRLSAT 161 (167)
Q Consensus 133 ~~v~~~D~~G~Y~C~a~n~~------~~~~~l~~~ 161 (167)
++++.+|+ |.|.|.+.|.. +..+.|.+.
T Consensus 86 ~~v~~~D~-G~Y~C~~~~~~~~~~~~~~~~~l~V~ 119 (220)
T 1pz5_B 86 NNLRAEDT-GIYYCTRGGAVGAMDYWGQGTSVTVS 119 (220)
T ss_dssp CSCCGGGC-EEEEEEEECTTSSEEEECCCEEEEEC
T ss_pred ccCCHHHC-EEEEEEEecCCcccceECCCEEEEEc
Confidence 99999999 99999999863 244566554
No 431
>1op3_H FAB 2G12, heavy chain; domain-swapped FAB 2G12, anti-carbohydrate antibody, immune system; HET: MAN; 1.75A {Homo sapiens} SCOP: b.1.1.1 b.1.1.2 PDB: 1om3_H* 1op5_H* 3oay_M* 1zlu_H* 1zlv_H* 1zlw_H* 2oqj_B 1zls_H* 3ob0_H* 3oau_H* 3oaz_H* 3ghe_H 3eyf_B 3eyo_B 3ghb_H 3c2a_H 1q1j_H 2fl5_H*
Probab=98.97 E-value=2.9e-09 Score=80.66 Aligned_cols=79 Identities=22% Similarity=0.357 Sum_probs=54.4
Q ss_pred ecCeEEEeCCcEEEEeeeCCccCCcceeEEEEeCC-Ceee--EEee---------eecCCceEEEcc-----CCeEEEee
Q psy12724 72 IMDEHVLKGNSAVLKCHIPSFVADYVAVESWISDQ-GEEL--FVDM---------TESTDGKYLVLP-----SGELHIRD 134 (167)
Q Consensus 72 ~~~~~v~~G~~a~l~C~~~~~~~~p~p~i~W~k~~-~~~l--~~~~---------~~~~~~r~~~~~-----~g~L~I~~ 134 (167)
+....+.+|++|+|+|.+.+.. ...+.+.|+|++ +..+ .-.. .+...+|+.+.. ++.|.|++
T Consensus 7 p~~~~v~~G~~v~L~C~~~~~~-~~~~~v~W~r~~~g~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~sL~I~~ 85 (225)
T 1op3_H 7 SGGGLVKAGGSLILSCGVSNFR-ISAHTMNWVRRVPGGGLEWVASISTSSTYRDYADAVKGRFTVSRDDLEDFVYLQMHK 85 (225)
T ss_dssp ECCEEEETTCCEEEEEEEESSC-GGGSCEEEEEECTTSCEEEEEEECGGGCCEEECTTTTTTEEEEEETTTTEEEEEECS
T ss_pred CCCeEecCCCCEEEEEEecCcc-cCCceEEEEEeCCCCCcEEEEEEccCCCccccCcccCCceEEEecCCCCEEEEEECC
Confidence 4456789999999999997431 126789999853 1211 1000 001246787663 24799999
Q ss_pred cCcCCCCcceEEEeeecC
Q psy12724 135 VGPEDGYKSYQCRTKHRL 152 (167)
Q Consensus 135 v~~~D~~G~Y~C~a~n~~ 152 (167)
++.+|+ |.|.|.+.|..
T Consensus 86 v~~~D~-G~Y~C~~~~~~ 102 (225)
T 1op3_H 86 MRVEDT-AIYYCARKGSD 102 (225)
T ss_dssp CCGGGC-EEEEEEEECCS
T ss_pred CChhhC-EEEEEEEecCC
Confidence 999999 99999999863
No 432
>1nbq_A JAM, junctional adhesion molecule 1, PAM-1; reovirus receptor, tight junction formation, immunoglobulin superfamily, immune system; 2.90A {Homo sapiens} SCOP: b.1.1.1 b.1.1.4 PDB: 3eoy_G
Probab=98.97 E-value=5.9e-10 Score=82.07 Aligned_cols=74 Identities=20% Similarity=0.292 Sum_probs=55.1
Q ss_pred cCeEEEeCCcEEEEeeeCCccCCcceeEEEEeCCCeeeEEee------eecCCceEEEccCCeEEEeecCcCCCCcceEE
Q psy12724 73 MDEHVLKGNSAVLKCHIPSFVADYVAVESWISDQGEELFVDM------TESTDGKYLVLPSGELHIRDVGPEDGYKSYQC 146 (167)
Q Consensus 73 ~~~~v~~G~~a~l~C~~~~~~~~p~p~i~W~k~~~~~l~~~~------~~~~~~r~~~~~~g~L~I~~v~~~D~~G~Y~C 146 (167)
.+..+.+|+++.|.|.+.+ .|.+.++|+|++. .+.... .....+|+.+. ++.|.|.+++.+|+ |.|+|
T Consensus 12 ~~~~v~~G~~v~L~C~~~~---~p~~~v~W~~~~~-~~~~~~~~~~~~~~~~~~r~~~~-~~~L~i~~~~~~d~-G~Y~C 85 (209)
T 1nbq_A 12 PEVRIPENNPVKLSCAYSG---FSSPRVEWKFDQG-DTTRLVCYNNKITASYEDRVTFL-PTGITFKSVTREDT-GTYTC 85 (209)
T ss_dssp SBCCEETTCCCEEECEEES---CSSEEEEEEEEET-TEEEESEETTEECTTTTTTCEEE-TTEEECSCCCTTSC-SEEEE
T ss_pred CceEEEcCCCEEEEEEEeC---CCCcEEEEEEcCC-ceeEEEEecCccCccccCceEee-ccEEEEeeCCHHHC-cEEEE
Confidence 4567889999999999974 4889999999874 321100 00123455554 48999999999999 99999
Q ss_pred EeeecC
Q psy12724 147 RTKHRL 152 (167)
Q Consensus 147 ~a~n~~ 152 (167)
.|.|..
T Consensus 86 ~~~~~~ 91 (209)
T 1nbq_A 86 MVSEEG 91 (209)
T ss_dssp EEEETT
T ss_pred EEecCC
Confidence 999863
No 433
>1f3r_B FV antibody fragment; IG-fold, immuno complex, antibody-antigen, beta-turn, immune system; HET: NLE; NMR {Rattus norvegicus} SCOP: b.1.1.1 b.1.1.1
Probab=98.97 E-value=1.2e-09 Score=84.35 Aligned_cols=78 Identities=14% Similarity=0.218 Sum_probs=53.9
Q ss_pred ecCeEEEeCCcEEEEeeeCCccCCcceeEEEEeCC-Cee---eEEee-------eecCCceEEEccC-----CeEEEeec
Q psy12724 72 IMDEHVLKGNSAVLKCHIPSFVADYVAVESWISDQ-GEE---LFVDM-------TESTDGKYLVLPS-----GELHIRDV 135 (167)
Q Consensus 72 ~~~~~v~~G~~a~l~C~~~~~~~~p~p~i~W~k~~-~~~---l~~~~-------~~~~~~r~~~~~~-----g~L~I~~v 135 (167)
+....+.+|++|+|.|.+.+. ..+.|.+.|+|++ +.. +.... .+...+|+.+..+ +.|.|+++
T Consensus 7 p~~~~v~~G~~v~L~C~~~g~-p~~~~~v~W~k~~~g~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~~L~I~~v 85 (257)
T 1f3r_B 7 SGPGLVRPSETLSLTCTVSGF-SLTSFSVSWVRHPSGKGPEWMGRMWYDGYTAYNSALKSRLSISRDTSKNQVFLKMNSL 85 (257)
T ss_dssp ECCSEECTTSEEEEEEEEESS-CTTTSCCEEEEEETTSCCEEEEEECSSSCEEECSSSSTTEEEEEETTTTEEEEEEESC
T ss_pred CCCccccCCceEEEEEEEecc-cCCCccEEEEEeCCCCCcEEEEEEecCCceeeCcccCCcEEEEEECCCCEEEEEECCC
Confidence 345678899999999999753 1136789999862 111 11100 0012467877542 37999999
Q ss_pred CcCCCCcceEEEeeec
Q psy12724 136 GPEDGYKSYQCRTKHR 151 (167)
Q Consensus 136 ~~~D~~G~Y~C~a~n~ 151 (167)
+.+|+ |.|.|.|.|.
T Consensus 86 ~~~Ds-G~Y~C~a~n~ 100 (257)
T 1f3r_B 86 QTDDT-GTYYCTRDLY 100 (257)
T ss_dssp CTTCC-EEEEEEEESS
T ss_pred CcccC-EEEEEEEccc
Confidence 99999 9999999997
No 434
>1xau_A B- and T-lymphocyte attenuator; IG domain, beta sandwich, structural genomics, PSI, protein structure initiative; 1.80A {Mus musculus} SCOP: b.1.1.4
Probab=98.97 E-value=3.6e-09 Score=72.95 Aligned_cols=85 Identities=13% Similarity=0.173 Sum_probs=56.6
Q ss_pred CeEEEeCCcEEEEeeeCCccCCcceeEEEEeCCCeeeEEeeeecCCceEEEc-cCC----eEEEeecCcCCCCcceEEEe
Q psy12724 74 DEHVLKGNSAVLKCHIPSFVADYVAVESWISDQGEELFVDMTESTDGKYLVL-PSG----ELHIRDVGPEDGYKSYQCRT 148 (167)
Q Consensus 74 ~~~v~~G~~a~l~C~~~~~~~~p~p~i~W~k~~~~~l~~~~~~~~~~r~~~~-~~g----~L~I~~v~~~D~~G~Y~C~a 148 (167)
..++..|+.+.|+|.+.+ .+|.|.++|.|.++....+... ....+.... .+. .|+|.+|..+|+ |.|+|.|
T Consensus 23 ~~tv~~G~~~~LeCpv~y--c~~rPnVtWcK~~~~~c~~L~~-~~q~~~~w~e~~n~s~fiL~f~~V~~sDs-G~YrCsA 98 (122)
T 1xau_A 23 KHSAWTGELFKIECPVKY--CVHRPNVTWCKHNGTIWVPLEV-GPQLYTSWEENRSVPVFVLHFKPIHLSDN-GSYSCST 98 (122)
T ss_dssp EEEECTTSCEEEEEEEEC--SSSCCCEEEEEECSSSEEECCC-BTTEEEEEECSSSSCEEEEEETTCCGGGC-EEEEEEE
T ss_pred cEEEecCCeEEEEeEecC--CCCCCcEEEEecCCeecccccc-ceeeecceeccCCceeEEEEEeeEEEcCC-ccEEEEe
Confidence 357889999999999964 4689999999977544333110 011111111 222 599999999999 9999999
Q ss_pred eecC----cceEEEeeeC
Q psy12724 149 KHRL----TGETRLSATK 162 (167)
Q Consensus 149 ~n~~----~~~~~l~~~~ 162 (167)
.|.. +....+.+++
T Consensus 99 n~~~g~ieSHs~ti~V~~ 116 (122)
T 1xau_A 99 NFNSQVINSHSVTIHVRE 116 (122)
T ss_dssp EETTEEEECCCEEEEEC-
T ss_pred eCCCCceeeeEEEEEEEe
Confidence 9965 3344455543
No 435
>2or7_A T-cell immunoglobulin and mucin domain- containing protein 2; beta barrel, immunoglobulin fold, IGV domain, TIM, immune system; 1.50A {Mus musculus}
Probab=98.97 E-value=1.4e-09 Score=74.45 Aligned_cols=90 Identities=16% Similarity=0.214 Sum_probs=58.7
Q ss_pred cCeEEEeCCcEEEEeeeCCccCCcceeEEEEeCC-------CeeeEEee---eecCCceEEEcc-----CCeEEEeecCc
Q psy12724 73 MDEHVLKGNSAVLKCHIPSFVADYVAVESWISDQ-------GEELFVDM---TESTDGKYLVLP-----SGELHIRDVGP 137 (167)
Q Consensus 73 ~~~~v~~G~~a~l~C~~~~~~~~p~p~i~W~k~~-------~~~l~~~~---~~~~~~r~~~~~-----~g~L~I~~v~~ 137 (167)
....+.+|++|+|+|...... .....+.|+|.. ...+.... .....+||.+.. +..|.|++++.
T Consensus 5 ~~v~~~~G~~v~L~C~~~~~~-~~~~~v~W~~~~~~~~~~~~~~i~~~~~~~~~~~~~r~~~~~~~~~~~~sL~I~~v~~ 83 (115)
T 2or7_A 5 TAVQGLAGHPVTLPCIYSTHL-GGIVPMCWGLGECRHSYCIRSLIWTNGYTVTHQRNSRYQLKGNISEGNVSLTIENTVV 83 (115)
T ss_dssp -CEEEETTSCEEECCBCCHHH-HCSCCEEEEESCHHHHTTTTEEEEECSSSEEEESSTTEECCSCGGGTBCCEEESSCCG
T ss_pred cEEEEEcCCCEEEEEEeecCC-CCCEEEEEECCCCCcCCCceEEEEeCCeEcccccCccEEEecCccCCeEEEEEccCCH
Confidence 346788999999999986321 123578999974 11111100 001346776542 24799999999
Q ss_pred CCCCcceEEEeeecC---cceEEEeeeCCe
Q psy12724 138 EDGYKSYQCRTKHRL---TGETRLSATKGR 164 (167)
Q Consensus 138 ~D~~G~Y~C~a~n~~---~~~~~l~~~~~~ 164 (167)
+|+ |.|.|.+.+.. ...+.|.+.+..
T Consensus 84 ~Ds-G~Y~C~v~~~~~~~~~~v~L~V~~~~ 112 (115)
T 2or7_A 84 GDG-GPYCCVVEIPGAFHFVDYMLEVKPEL 112 (115)
T ss_dssp GGC-EEEEEEECCTTSCEEEEEEEEEESCC
T ss_pred HHC-EEEEEEEECCCceeEEEEEEEEcCCC
Confidence 999 99999998753 445666666654
No 436
>4hwn_A FC receptor-like A; FCRLA, FCRL, IG-C2 domain, IG superfamily, immune system, ST genomics, PSI-biology; 2.01A {Homo sapiens}
Probab=98.96 E-value=2.3e-09 Score=73.13 Aligned_cols=61 Identities=18% Similarity=0.214 Sum_probs=44.7
Q ss_pred EEEeCCcEEEEeeeCCccCCcce-----eEEEEeCCCeeeEEeeeecCCceEEEccCCeEEEeecCcCCCCcceEEEeee
Q psy12724 76 HVLKGNSAVLKCHIPSFVADYVA-----VESWISDQGEELFVDMTESTDGKYLVLPSGELHIRDVGPEDGYKSYQCRTKH 150 (167)
Q Consensus 76 ~v~~G~~a~l~C~~~~~~~~p~p-----~i~W~k~~~~~l~~~~~~~~~~r~~~~~~g~L~I~~v~~~D~~G~Y~C~a~n 150 (167)
.+.+|++++|.|.+.+ .|.+ .+.|+||+ ..+.. ...++.|.|.+++.+|+ |.|+|.|.|
T Consensus 18 ~v~~G~~VtL~C~~~~---~~~~~~~~~~~~w~k~g-~~l~~-----------~~~~~~l~i~~v~~~ds-G~Y~C~~~~ 81 (108)
T 4hwn_A 18 EPQAGSPMTLSCQTKL---PLQRSAARLLFSFYKDG-RIVQS-----------RGLSSEFQIPTASEDHS-GSYWCEAAT 81 (108)
T ss_dssp SCBTTCCEEEEEEC------------CCEEEEEETT-EEEEE-----------EESCCEEEESSCCGGGC-EEEEEEEEC
T ss_pred cCCCCCcEEEEEcccC---CCCCcCcceEEEEEECC-cCccC-----------CCcccEEEeCccCcccC-eEEEEEEEe
Confidence 4678999999999863 2433 38999997 44421 12457899999999999 999999998
Q ss_pred cC
Q psy12724 151 RL 152 (167)
Q Consensus 151 ~~ 152 (167)
..
T Consensus 82 ~~ 83 (108)
T 4hwn_A 82 ED 83 (108)
T ss_dssp TT
T ss_pred CC
Confidence 64
No 437
>3bkj_L WO2 IGG2A FAB fragment light chain kappa; abeta, FAB, WO2, alzheimer'S disease, immunotherapies, APP, immune system; 1.59A {Mus musculus} PDB: 3bkc_L 3bkm_L 2zuq_B* 1h3p_L
Probab=98.96 E-value=1.5e-09 Score=83.44 Aligned_cols=77 Identities=19% Similarity=0.267 Sum_probs=54.4
Q ss_pred ecCeEEEeCCcEEEEeeeCCccCCc-----ceeEEEEeCC-Ceee--EEe----eeecCCceEEEccCC---eEEEeecC
Q psy12724 72 IMDEHVLKGNSAVLKCHIPSFVADY-----VAVESWISDQ-GEEL--FVD----MTESTDGKYLVLPSG---ELHIRDVG 136 (167)
Q Consensus 72 ~~~~~v~~G~~a~l~C~~~~~~~~p-----~p~i~W~k~~-~~~l--~~~----~~~~~~~r~~~~~~g---~L~I~~v~ 136 (167)
+.+..+.+|++|+|+|.+.+. | .+.++|+|++ +..+ ... ..+...+|+.+..++ .|.|.+++
T Consensus 41 p~~~~v~~G~~v~L~C~~~~~---~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~ 117 (252)
T 3bkj_L 41 PLSLPVNLGEQASISCRSSQS---IVHSNGHTYLEWYLQRPGQSPKLLIYQVSTRFSGVPDRFSGSGSGTDFTLRISRVE 117 (252)
T ss_dssp CSEEEECTTSCEEEEEEESSC---CBCTTSCBCEEEEEECTTSCCEEEEETTTEECTTCCTTEEEEEETTEEEEEESSCC
T ss_pred CceEEEeCCCcEEEEEEcCCC---ccccCCCCcEEEEEECCCCCcEEEEEcCCcccCCcCCceEEEccCCEEEEEECCCC
Confidence 345678899999999999753 5 5889999964 1111 100 000113577665433 79999999
Q ss_pred cCCCCcceEEEeeecC
Q psy12724 137 PEDGYKSYQCRTKHRL 152 (167)
Q Consensus 137 ~~D~~G~Y~C~a~n~~ 152 (167)
.+|+ |.|.|.|.|..
T Consensus 118 ~~D~-G~Y~C~~~~~~ 132 (252)
T 3bkj_L 118 AEDL-GVYYCFQASLV 132 (252)
T ss_dssp GGGC-EEEEEEECSBS
T ss_pred cccC-EEEEEEEEcCC
Confidence 9999 99999999874
No 438
>1zox_A CLM-1; IG-superfamily, IG-V, NKP44-like, myeloid IG-like receptor, structural genomics, PSI, protein structure initiative; 2.10A {Mus musculus}
Probab=98.96 E-value=2e-09 Score=73.40 Aligned_cols=88 Identities=10% Similarity=0.035 Sum_probs=58.6
Q ss_pred cCeEEEeCCcEEEEeeeCCccCCcceeEEEEeCCCe----eeEEeee---ecCCceEEEcc---CC--eEEEeecCcCCC
Q psy12724 73 MDEHVLKGNSAVLKCHIPSFVADYVAVESWISDQGE----ELFVDMT---ESTDGKYLVLP---SG--ELHIRDVGPEDG 140 (167)
Q Consensus 73 ~~~~v~~G~~a~l~C~~~~~~~~p~p~i~W~k~~~~----~l~~~~~---~~~~~r~~~~~---~g--~L~I~~v~~~D~ 140 (167)
....+.+|++|.|+|...+. .....+.|+|.... .+..... +...+|+.+.. ++ .|.|++++.+|+
T Consensus 9 ~~v~~~~G~~v~L~C~~~~~--~~~~~v~W~~~~~~~~~~~l~~~~~~~~~~~~~R~~~~~~~~~~~~sL~I~~~~~~Ds 86 (113)
T 1zox_A 9 EEVSGQEQGSLTVQCRYTSG--WKDYKKYWCQGVPQRSCKTLVETDASEQLVKKNRVSIRDNQRDFIFTVTMEDLRMSDA 86 (113)
T ss_dssp SEEEEETTSCEEEEEEECGG--GTTSCEEEEESSSGGGCEEEEECCSSSCCEEETTEEEEEETTTTEEEEEECSCCGGGC
T ss_pred CEEEEeCCCcEEEEeECCCC--cccceEEEEeCCCCCCCeEEEEecCccccccCCCEEEEECCcCCEEEEEEccCCHHHC
Confidence 34578899999999998742 12345899997521 1211100 01235776652 22 799999999999
Q ss_pred CcceEEEeeecC---cceEEEeeeCC
Q psy12724 141 YKSYQCRTKHRL---TGETRLSATKG 163 (167)
Q Consensus 141 ~G~Y~C~a~n~~---~~~~~l~~~~~ 163 (167)
|.|.|.+.+.. ...+.|.+.+.
T Consensus 87 -G~Y~C~v~~~~~~~~~~v~L~V~~~ 111 (113)
T 1zox_A 87 -GIYWCGITKGGLDPMFKVTVNIGPV 111 (113)
T ss_dssp -EEEEEEECCSSSCCEEEEEEEEECC
T ss_pred -EEEEEeeEcCCCCccEEEEEEEEcC
Confidence 99999999874 44667777654
No 439
>1i3g_L Antibody FV fragment; antibiotic; 2.44A {Mus musculus} SCOP: b.1.1.1 PDB: 3iy6_A
Probab=98.96 E-value=1.6e-09 Score=73.95 Aligned_cols=75 Identities=16% Similarity=0.186 Sum_probs=51.9
Q ss_pred CeEEEeCCcEEEEeeeCCccCCcceeEEEEeCCC-e---eeEEe---eeecCCceEEEccC---CeEEEeecCcCCCCcc
Q psy12724 74 DEHVLKGNSAVLKCHIPSFVADYVAVESWISDQG-E---ELFVD---MTESTDGKYLVLPS---GELHIRDVGPEDGYKS 143 (167)
Q Consensus 74 ~~~v~~G~~a~l~C~~~~~~~~p~p~i~W~k~~~-~---~l~~~---~~~~~~~r~~~~~~---g~L~I~~v~~~D~~G~ 143 (167)
+..+.+|++|+|+|.+.+. +.+.+.|+|... . .+... ..+...+|+.+..+ ..|.|++++.+|+ |.
T Consensus 13 ~~~~~~G~~v~L~C~~~~~---~~~~v~W~r~~~~~~~~~l~~~~~~~~~~~~~R~~~~~~~~~~~L~I~~v~~~Ds-G~ 88 (111)
T 1i3g_L 13 FMSTSVGDRVSITCKASQD---VGTAVAWYQQKPGQSPKLLIYWASTRHTGVPDRFTGSGSGTDFTLTISNVQSEDL-AD 88 (111)
T ss_dssp EEECCTTCCEEEEEEESSC---CTTCEEEEEECTTSCCEEEEETTTEECTTCCTTEEEEEETTEEEEEESSCCGGGC-SE
T ss_pred EEEEcCCCCEEEEEEeCCC---CCCCEEEEEECCCCCCEEEEEECCccCCCCCCcEEEEcCCCEEEEEECCCCHHHC-EE
Confidence 4567899999999999743 567899998641 1 12110 00012457766432 3699999999999 99
Q ss_pred eEEEeeecC
Q psy12724 144 YQCRTKHRL 152 (167)
Q Consensus 144 Y~C~a~n~~ 152 (167)
|.|.+.|..
T Consensus 89 Y~C~~~~~~ 97 (111)
T 1i3g_L 89 YFCQQYSSY 97 (111)
T ss_dssp EEEEECSSS
T ss_pred EEEEEecCC
Confidence 999999863
No 440
>3qib_D 2B4 beta chain; IG domain, immune system; HET: NAG FUC BMA; 2.70A {Mus musculus}
Probab=98.96 E-value=2.4e-09 Score=83.06 Aligned_cols=73 Identities=15% Similarity=0.258 Sum_probs=50.0
Q ss_pred cCeEEEeCCcEEEEeeeCCccCCcceeEEEEeCC-Cee--eEEeeee-------cCCc-eEEEcc----CCeEEEeecCc
Q psy12724 73 MDEHVLKGNSAVLKCHIPSFVADYVAVESWISDQ-GEE--LFVDMTE-------STDG-KYLVLP----SGELHIRDVGP 137 (167)
Q Consensus 73 ~~~~v~~G~~a~l~C~~~~~~~~p~p~i~W~k~~-~~~--l~~~~~~-------~~~~-r~~~~~----~g~L~I~~v~~ 137 (167)
.+..+.+|++|+|+|.+.+ +.+.+.|+|.. +.. +.-.... ...+ |+.+.. ++.|.|++++.
T Consensus 35 ~~v~v~~G~~v~L~C~~~~----~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~sL~I~~v~~ 110 (270)
T 3qib_D 35 RYLVKGQGQKAKMRCIPEK----GHPVVFWYQQNKNNEFKFLINFQNQEVLQQIDMTEKRFSAECPSNSPCSLEIQSSEA 110 (270)
T ss_dssp SEEEEETTSCEEEEEECCT----TCCEEEEEEECTTCCEEEEEEEETTEEEEECHHHHHHEEEECCTTSCEEEEESSCCG
T ss_pred CeEEEcCCCCEEEEEEecC----CCceEEEEEECCCCCcEEEEEECCCCceecCCccCCcEEEEeCCCcEEEEEECCCCH
Confidence 4467889999999999853 66789999832 111 1100000 0001 776653 44799999999
Q ss_pred CCCCcceEEEeee
Q psy12724 138 EDGYKSYQCRTKH 150 (167)
Q Consensus 138 ~D~~G~Y~C~a~n 150 (167)
+|+ |.|.|.+.|
T Consensus 111 ~D~-G~Y~C~~~~ 122 (270)
T 3qib_D 111 GDS-ALYLCASSL 122 (270)
T ss_dssp GGC-EEEEEEEES
T ss_pred hHC-eEEEEEEec
Confidence 999 999999996
No 441
>3pl6_D MBP peptide / T-cell receptor beta chain chimera; TCR-MHC complex, immunoglobulin fold, immune receptor, membr immune system; HET: NAG; 2.55A {Homo sapiens}
Probab=98.96 E-value=1.3e-09 Score=84.26 Aligned_cols=84 Identities=18% Similarity=0.323 Sum_probs=56.6
Q ss_pred cCeEEEeCCcEEEEeeeCCccCCcceeEEEEeCC-Ceee--EEeee-------ecC-CceEEEcc----CCeEEEeecCc
Q psy12724 73 MDEHVLKGNSAVLKCHIPSFVADYVAVESWISDQ-GEEL--FVDMT-------EST-DGKYLVLP----SGELHIRDVGP 137 (167)
Q Consensus 73 ~~~~v~~G~~a~l~C~~~~~~~~p~p~i~W~k~~-~~~l--~~~~~-------~~~-~~r~~~~~----~g~L~I~~v~~ 137 (167)
.+..+.+|++|+|+|.+. .+.+.+.|+|.. +... ..... ... .+|+.+.. ++.|.|++++.
T Consensus 34 ~~v~v~~G~~v~L~C~~~----~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~sL~I~~v~~ 109 (268)
T 3pl6_D 34 SNKVTEKGKYVELRCDPI----SGHTALYWYRQSLGQGPEFLIYFQGTGAADDSGLPNDRFFAVRPEGSVSTLKIQRTER 109 (268)
T ss_dssp SEEEEETTCCEEEEEBCB----TTCCEEEEEEECTTSCCEEEEEEETTEEEECTTCCSTTEEEECTTSSSEEEEECSCCG
T ss_pred CEEEecCCCCEEEEEEeC----CCCceEEEEEECCCCCcEEEEEECCCCccccCCCccCcEEEEecCCCEEEEEECCCCc
Confidence 346788999999999985 367889999821 1111 10000 000 16777764 45799999999
Q ss_pred CCCCcceEEEeeec-----CcceEEEeee
Q psy12724 138 EDGYKSYQCRTKHR-----LTGETRLSAT 161 (167)
Q Consensus 138 ~D~~G~Y~C~a~n~-----~~~~~~l~~~ 161 (167)
+|+ |.|.|.+.|. ....+.|.+.
T Consensus 110 ~D~-G~Y~C~~~~~~~~~~~~~~~~l~V~ 137 (268)
T 3pl6_D 110 GDS-AVYLCATSALGDTQYFGPGTRLTVL 137 (268)
T ss_dssp GGC-EEEEEEEESSSSSCEECCCEEEEEE
T ss_pred ccC-EEEEEEEecCCCceeeCCcEEEEEe
Confidence 999 9999999973 2444555554
No 442
>1mq8_A ICAM-1, intercellular adhesion molecule-1, CD54 antigen; IG superfamily, rossmann fold, metal mediated protein interf immune system; HET: NAG; 3.30A {Homo sapiens} SCOP: b.1.1.3 b.1.1.4
Probab=98.96 E-value=3.6e-09 Score=84.72 Aligned_cols=127 Identities=12% Similarity=0.154 Sum_probs=79.9
Q ss_pred eeeEEeEEEEEeCCcEEEEeecCCCCCCcceeeEEeeCCCceee-ecCCc---eEE-----EeeeEEEecC---------
Q psy12724 13 YEAQVYDVFVIKGNAAVFKCNLPSFVSDHLDVVSWADTDGGQYQ-IDNQD---FVV-----SQSYTVNIMD--------- 74 (167)
Q Consensus 13 ~~~~~~~~~v~~G~~~~l~C~a~~~~~~~~~~i~W~k~~~~~~~-~~~~~---~v~-----~g~y~c~~~~--------- 74 (167)
.++.|+++.|.+|+++.|.|.+...... .+.|...-.+... ..+.. +.+ .+.|.|.+..
T Consensus 2 ~~v~P~~~~V~~G~sv~l~Cs~~c~~p~---~~~~~t~l~~~~~~~~g~~~~~~~l~~v~~~~~y~C~~~~~~~~~~~~v 78 (291)
T 1mq8_A 2 TSVSPSKVILPRGGSVLVTCSTSCDQPK---LLGIETPLPKKELLLPGNNRKVYELSNVQEDSQPMCYSNCPDGQSTAKT 78 (291)
T ss_dssp EEEECSEEEECTTCEEEEEEEECCSSCS---EEEEECSSCCCCCCCSCSSEEEEEEESCCSCCCCEEEEECSSCEEEEEC
T ss_pred eEEeCCccEEcCCCeEEEEEeCCCCCCc---cceEEecCCCcccccCCCceEEEEEEecccCCeEEEEEEcCCccEEEEE
Confidence 4578889999999999999999643322 4788632111121 11211 111 4679998621
Q ss_pred -----------------eEEEeCCcEEEEeeeCCccCCcce--eEEEEeCCCeeeEEeeeecCCceEEEccCCeEEEeec
Q psy12724 75 -----------------EHVLKGNSAVLKCHIPSFVADYVA--VESWISDQGEELFVDMTESTDGKYLVLPSGELHIRDV 135 (167)
Q Consensus 75 -----------------~~v~~G~~a~l~C~~~~~~~~p~p--~i~W~k~~~~~l~~~~~~~~~~r~~~~~~g~L~I~~v 135 (167)
..+.+|+.+.|.|.+.+. .|.+ .|+|+|++ ..+.... .... ..+..|.|...
T Consensus 79 ~l~V~~~P~~v~I~~~~~~~~~G~~~~LtC~v~g~--~P~~~l~itW~kg~-~~l~~~~---~~~~---~~~~~l~~~~~ 149 (291)
T 1mq8_A 79 FLTVYWTPERVELAPLPSWQPVGKNLTLRCQVEGG--APRANLTVVLLRGE-KELKREP---AVGE---PAEVTTTVLVR 149 (291)
T ss_dssp EEEECBCCSCCCBCCCCSBCCSSCCCEEEEEECCC--BSTTTEEEEEESSS-SEEEEEE---CCBT---TEEEEEECCCS
T ss_pred EEEEecCCCCCEEecCCccccCCCCEEEEEEecCc--cCCCCcEEEEEECC-EEeeccc---CCCC---CceEEEEeeee
Confidence 124679999999999863 3543 68999998 5654321 0110 01235666666
Q ss_pred CcCCCCcceEEEeeecC
Q psy12724 136 GPEDGYKSYQCRTKHRL 152 (167)
Q Consensus 136 ~~~D~~G~Y~C~a~n~~ 152 (167)
+..|. +.|+|.|.|.+
T Consensus 150 ~~D~g-~~~~C~A~~~l 165 (291)
T 1mq8_A 150 RDHHG-ANFSCRTELDL 165 (291)
T ss_dssp SSCSS-CEEEEEEEEEC
T ss_pred eccCC-ceEEEEEEecC
Confidence 66665 79999999975
No 443
>1mju_H Immunoglobulin MS6-12; catalytic antibody, ester hydrolysis, esterolytic, FAB, immune system; 1.22A {Mus musculus} SCOP: b.1.1.1 b.1.1.2 PDB: 1mjj_B 1mie_H 1mj7_H* 1mj8_H 1mh5_B* 4aeh_H 2y5t_A 2vwe_E 2op4_H 2ntf_H 3loh_C 1e4x_H 2vl5_A 1e4x_I 1e4w_H 3opz_H 3oz9_H 1plg_H 1hi6_B 1cfn_B ...
Probab=98.96 E-value=2e-09 Score=81.87 Aligned_cols=85 Identities=19% Similarity=0.323 Sum_probs=58.0
Q ss_pred cCeEEEeCCcEEEEeeeCCccCCc--ceeEEEEeCC-Ceee--EEeee---------ecCCceEEEcc-----CCeEEEe
Q psy12724 73 MDEHVLKGNSAVLKCHIPSFVADY--VAVESWISDQ-GEEL--FVDMT---------ESTDGKYLVLP-----SGELHIR 133 (167)
Q Consensus 73 ~~~~v~~G~~a~l~C~~~~~~~~p--~p~i~W~k~~-~~~l--~~~~~---------~~~~~r~~~~~-----~g~L~I~ 133 (167)
.+..+.+|++|+|+|.+.+. | .+.+.|+|++ +..+ .-... +...+|+.+.. ++.|.|+
T Consensus 8 ~~~~v~~G~~v~L~C~~~~~---~~~~~~v~W~r~~~g~~~~~l~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~sL~I~ 84 (227)
T 1mju_H 8 GAELVKPGASVKLSCKASGY---TFTNYWINWVKQRPGQGLEWIGNIYPGSSYTHYNEKFKNKATLTVDTSSSTAYMQLS 84 (227)
T ss_dssp SEEEECTTCCEEEEEEEESS---CGGGSCEEEEEECTTSCEEEEEEEETTTTEEEECGGGTTTEEEEEETTTTEEEEEEC
T ss_pred CCeEEcCCCCEEEEEEecCC---ccccceEEEEEeCCCCCcEEEEEEeccCCceeeCCccCCcEEEEEeCCCCeEEEEEC
Confidence 44578899999999999743 4 5789999864 1221 10000 01146777653 3489999
Q ss_pred ecCcCCCCcceEEEeeecC----cceEEEeee
Q psy12724 134 DVGPEDGYKSYQCRTKHRL----TGETRLSAT 161 (167)
Q Consensus 134 ~v~~~D~~G~Y~C~a~n~~----~~~~~l~~~ 161 (167)
+++.+|+ |.|.|.+.|.. ...+.|.+.
T Consensus 85 ~v~~~D~-G~Y~C~~~~~~~~~~~~~~~L~V~ 115 (227)
T 1mju_H 85 SLTSDDS-AVYYCANKLGWFPYWGQGTLVTVS 115 (227)
T ss_dssp SCCGGGC-EEEEEEEEETTEEEECCCEEEEEC
T ss_pred CCCcccC-EEEEEEECCCCceEEcCcEEEEEc
Confidence 9999999 99999999852 344566664
No 444
>1za6_B IGG heavy chain; immunoglobulin fold, CH2-domain-deletion, immune system; 2.80A {Homo sapiens} SCOP: b.1.1.1 b.1.1.2 b.1.1.2
Probab=98.96 E-value=1.4e-09 Score=87.25 Aligned_cols=87 Identities=18% Similarity=0.294 Sum_probs=59.0
Q ss_pred cCeEEEeCCcEEEEeeeCCccCCcceeEEEEeCC-CeeeE--Eee---------eecCCceEEEccC-----CeEEEeec
Q psy12724 73 MDEHVLKGNSAVLKCHIPSFVADYVAVESWISDQ-GEELF--VDM---------TESTDGKYLVLPS-----GELHIRDV 135 (167)
Q Consensus 73 ~~~~v~~G~~a~l~C~~~~~~~~p~p~i~W~k~~-~~~l~--~~~---------~~~~~~r~~~~~~-----g~L~I~~v 135 (167)
.+..+.+|++|.|+|.+.+. ..|.+.++|+|++ +..+. ... .+...+|+.+..+ +.|.|+++
T Consensus 8 ~~~~v~~G~~v~L~C~~~~~-~~~~~~v~W~k~~~g~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~~L~I~~v 86 (344)
T 1za6_B 8 GAEVVKPGASVKISCKASGY-TFTDHAIHWVKQNPGQRLEWIGYFSPGNDDFKYNERFKGKATLTADTSASTAYVELSSL 86 (344)
T ss_dssp CCEEECTTCCEEEEEEEESS-CTTSSCEEEEEECSSSCEEEEEEEETTTTEEEECTTTBTTEEEEEETTTTEEEEEECSC
T ss_pred CCeEEeCCCcEEEEEEcCCc-cccccEEEEEEECCCCCcEEEEEEecCCCceEECcccCCcEEEEEecCCCEEEEEECCC
Confidence 35678899999999999753 1146789999873 22221 000 0012467776642 47999999
Q ss_pred CcCCCCcceEEEeeecC---cceEEEeee
Q psy12724 136 GPEDGYKSYQCRTKHRL---TGETRLSAT 161 (167)
Q Consensus 136 ~~~D~~G~Y~C~a~n~~---~~~~~l~~~ 161 (167)
+.+|+ |.|.|.|.|.. ...+.|.+.
T Consensus 87 ~~~D~-G~Y~C~~~n~~~~~~~~~~l~V~ 114 (344)
T 1za6_B 87 RSEDT-AVYFCTRSLNMAYWGQGTLVTVS 114 (344)
T ss_dssp CGGGC-EEEEEEETTTTCEECCCEEEEEC
T ss_pred CcccC-EEEEEEEecCcceecCcEEEEEe
Confidence 99999 99999999953 344566654
No 445
>3umt_A SCFV heavy chain and light chain; stability engineering, anthrax, anti-BCLA antibody, immunoglobulin fold (VH and VL domains), antibody, immune S; HET: NHE; 1.80A {Mus musculus} PDB: 1xiw_D
Probab=98.96 E-value=1.6e-09 Score=83.42 Aligned_cols=87 Identities=21% Similarity=0.320 Sum_probs=58.3
Q ss_pred cCeEEEeCCcEEEEeeeCCccCCcceeEEEEeCC-CeeeEEe-----------eeecCCceEEEccCC-----eEEEeec
Q psy12724 73 MDEHVLKGNSAVLKCHIPSFVADYVAVESWISDQ-GEELFVD-----------MTESTDGKYLVLPSG-----ELHIRDV 135 (167)
Q Consensus 73 ~~~~v~~G~~a~l~C~~~~~~~~p~p~i~W~k~~-~~~l~~~-----------~~~~~~~r~~~~~~g-----~L~I~~v 135 (167)
.+..+.+|++|+|.|.+.+. ..+.+.+.|+|.. +..+... ..+...+|+.+..++ .|.|+++
T Consensus 10 ~~~~v~~G~~v~L~C~~~~~-~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~I~~v 88 (256)
T 3umt_A 10 GLELVKPGASVKISCKTSGY-TFTEYTMHWVKQSHGKSLEWIGGINPNNGGTSYNQKFKGKAILTVDKSSSTAYLELRSL 88 (256)
T ss_dssp CCEEECTTCCEEEEEEEESS-CGGGSCEEEEEECTTSCEEEEEEECTTTCCEEECGGGTTTEEEEEEGGGTEEEEEECSC
T ss_pred CceEEcCCCCEEEEEEEecc-cccccEEEEEEECCCCCcEEEEEEeccCCcccccccccceEEEEEecCCCEEEEEECCC
Confidence 34567899999999998753 1126789999742 2221100 001124677776433 3999999
Q ss_pred CcCCCCcceEEEeeec-------CcceEEEeee
Q psy12724 136 GPEDGYKSYQCRTKHR-------LTGETRLSAT 161 (167)
Q Consensus 136 ~~~D~~G~Y~C~a~n~-------~~~~~~l~~~ 161 (167)
+.+|+ |.|.|.|.|. ....+.|.+.
T Consensus 89 ~~~Ds-G~Y~C~~~~~~~~~~~~~~~~~~L~V~ 120 (256)
T 3umt_A 89 TSEDS-AVYYCARDDRYPAWFAYWGQGTTVTVS 120 (256)
T ss_dssp CGGGC-EEEEEEECCSTTCCSCEECCCEEEEEC
T ss_pred CcccC-EEEEEEEccCCCccccEECCCEEEEEc
Confidence 99999 9999999997 2445666665
No 446
>2xzc_L FAB A.17 light chain; immune system; HET: XOP; 1.36A {Homo sapiens} PDB: 2xza_L* 3kdm_L* 3nps_C 1dn0_A 1qlr_A* 2v7n_A 3eo0_A 3eo1_A 2agj_L* 2fx7_L 1tzg_L 2fx8_L 2fx9_L* 1u6a_L 3hi1_L* 3kym_A 3kyk_L 3qwo_L* 3ixt_L* 3qeg_L ...
Probab=98.96 E-value=1.7e-09 Score=80.81 Aligned_cols=78 Identities=17% Similarity=0.187 Sum_probs=52.8
Q ss_pred ecCeEEEeCCcEEEEeeeCCccCC-cceeEEEEeCCC-eeeEE-ee-----eecCCceEEEccCC---eEEEeecCcCCC
Q psy12724 72 IMDEHVLKGNSAVLKCHIPSFVAD-YVAVESWISDQG-EELFV-DM-----TESTDGKYLVLPSG---ELHIRDVGPEDG 140 (167)
Q Consensus 72 ~~~~~v~~G~~a~l~C~~~~~~~~-p~p~i~W~k~~~-~~l~~-~~-----~~~~~~r~~~~~~g---~L~I~~v~~~D~ 140 (167)
+.+..+.+|++|.|.|.+.+ +. +.+.++|+|++. ..+.. .. .....+|+.+..++ .|.|.+++.+|+
T Consensus 7 p~~~~v~~G~~v~L~C~v~~--~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~D~ 84 (216)
T 2xzc_L 7 PPSVSAAPGQKVTISCSGSS--SNIGNNYVSWYQQLPGTAPKLLIYDNNKRPSGIPDRFSGSKSGTSATLGITGLQTGDE 84 (216)
T ss_dssp CSEEEECTTCCEEEEEECCT--TTGGGSCCEEEEECTTSCCEEEEBTTTBCCTTCCTTEEEEEETTEEEEEECSCCGGGC
T ss_pred CCcEEecCCCeEEEEEEeec--CCCCCCeEEEEEeCCCCCcEEEEEecCccCCCCCCceEEeccCCEEEEEECCCCcccC
Confidence 34567889999999999532 22 367899999541 11110 00 00113577665333 799999999999
Q ss_pred CcceEEEeeecC
Q psy12724 141 YKSYQCRTKHRL 152 (167)
Q Consensus 141 ~G~Y~C~a~n~~ 152 (167)
|.|.|.|.|..
T Consensus 85 -G~Y~C~~~~~~ 95 (216)
T 2xzc_L 85 -ADYYCGTWDSS 95 (216)
T ss_dssp -EEEEEEEECTT
T ss_pred -EEEEEEEEeCC
Confidence 99999999965
No 447
>3ux9_B SCFV antibody; five helices, long loop connecting helix, hydrophobic intera cytokine-immune system complex; 2.80A {Homo sapiens}
Probab=98.95 E-value=1.3e-09 Score=83.75 Aligned_cols=76 Identities=18% Similarity=0.261 Sum_probs=52.7
Q ss_pred CeEEEeCCcEEEEeeeCCccCCcceeEEEEeCC-CeeeEEeee------ecCCceEEEccCC---eEEEeecCcCCCCcc
Q psy12724 74 DEHVLKGNSAVLKCHIPSFVADYVAVESWISDQ-GEELFVDMT------ESTDGKYLVLPSG---ELHIRDVGPEDGYKS 143 (167)
Q Consensus 74 ~~~v~~G~~a~l~C~~~~~~~~p~p~i~W~k~~-~~~l~~~~~------~~~~~r~~~~~~g---~L~I~~v~~~D~~G~ 143 (167)
+..+.+|++|+|+|.+.+. ..|.+.+.|+|++ +........ ....+|+.+..++ .|.|++++.+|+ |.
T Consensus 11 ~~~v~~G~~v~L~C~~~~~-~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~Ds-G~ 88 (256)
T 3ux9_B 11 SVSGAPGQRVTISCSGSSS-NIGSNYVSWYQQLPGTAPKLLIYDNNQRPSGVPDRFSGSKSGTSASLAITGLQSEDE-AD 88 (256)
T ss_dssp EEEECTTCCEEEEEECCTT-TTTTSCCEEEEECTTSCCEEEEBTTTBCCTTCCTTEEEEEETTEEEEEECSCCGGGC-EE
T ss_pred cEEEcCCCcEEEEEecCCC-CCCCceEEEEEECCCCCCEEEEEecCCCCCCcCCcEEEEccCCEEEEEECCCChhhC-EE
Confidence 4578899999999999742 1267889999853 111110000 0123577665433 699999999999 99
Q ss_pred eEEEeeec
Q psy12724 144 YQCRTKHR 151 (167)
Q Consensus 144 Y~C~a~n~ 151 (167)
|.|.|.|.
T Consensus 89 Y~C~~~~~ 96 (256)
T 3ux9_B 89 YYCQVRDN 96 (256)
T ss_dssp EEEEEEET
T ss_pred EEEEEEEC
Confidence 99999984
No 448
>3ry4_A Low affinity immunoglobulin gamma FC region recep; FC receptor, CD32, immunoglobulin superfamily, low responder polymorphism, cell membrane; HET: NAG; 1.50A {Homo sapiens} PDB: 1fcg_A 3ry5_A 1h9v_A 3d5o_F* 3ry6_C* 2fcb_A
Probab=98.95 E-value=2.7e-09 Score=76.60 Aligned_cols=73 Identities=15% Similarity=0.176 Sum_probs=55.2
Q ss_pred EecCeEEEeCCcEEEEeeeCCccCCc-ceeEEEEeCCCeeeEEeeeecCCceEEEccCCeEEEeecCcCCCCcceEEEee
Q psy12724 71 NIMDEHVLKGNSAVLKCHIPSFVADY-VAVESWISDQGEELFVDMTESTDGKYLVLPSGELHIRDVGPEDGYKSYQCRTK 149 (167)
Q Consensus 71 ~~~~~~v~~G~~a~l~C~~~~~~~~p-~p~i~W~k~~~~~l~~~~~~~~~~r~~~~~~g~L~I~~v~~~D~~G~Y~C~a~ 149 (167)
.+.+..+.+|+++.|.|.+.+. | .+.++|+|++ ..+. . .++.|.|.+++.+|+ |.|+|.|.
T Consensus 10 ~p~~~~v~~G~~v~l~C~~~~~---p~~~~~~W~~~g-~~~~-------~------~~~~~~~~~~~~~d~-G~Y~C~~~ 71 (170)
T 3ry4_A 10 EPPWINVLQEDSVTLTCQGARS---PESDSIQWFHNG-NLIP-------T------HTQPSYRFKANNNDS-GEYTCQTG 71 (170)
T ss_dssp ESCCSEEETTCEEEEEEESCCC---SSSSCEEEEETT-EECT-------T------CCSSEEEEECCGGGC-EEEEEEET
T ss_pred CCCCeEEECCCcEEEEEEecCC---CCcceEEEEECC-eEcc-------c------CccceEEEecccccC-eEEEEEEe
Confidence 3444578899999999999853 4 6789999997 4442 1 145688999999999 99999999
Q ss_pred ecC-cceEEEeee
Q psy12724 150 HRL-TGETRLSAT 161 (167)
Q Consensus 150 n~~-~~~~~l~~~ 161 (167)
|.. +..+.|.+.
T Consensus 72 ~~~~s~~~~l~v~ 84 (170)
T 3ry4_A 72 QTSLSDPVHLTVL 84 (170)
T ss_dssp TSBCCCCEEEEEE
T ss_pred CCCceEeEEEEEE
Confidence 865 445555554
No 449
>2q87_A CMRF35-H antigen; all-beta, immunoglobulin, IG-superfamily, IG-V, NKP44-like, natural killer cell IG-like receptor, inhibitory receptor; 1.70A {Homo sapiens}
Probab=98.95 E-value=2.7e-09 Score=72.45 Aligned_cols=87 Identities=13% Similarity=0.155 Sum_probs=56.1
Q ss_pred CeEEEeCCcEEEEeeeCCccCCcceeEEEEeCCC-e-e--eEEeeee--cCCceEEEcc---C--CeEEEeecCcCCCCc
Q psy12724 74 DEHVLKGNSAVLKCHIPSFVADYVAVESWISDQG-E-E--LFVDMTE--STDGKYLVLP---S--GELHIRDVGPEDGYK 142 (167)
Q Consensus 74 ~~~v~~G~~a~l~C~~~~~~~~p~p~i~W~k~~~-~-~--l~~~~~~--~~~~r~~~~~---~--g~L~I~~v~~~D~~G 142 (167)
...+.+|++|+|+|.+.+. .+.+.+.|+|... . . +...... ...+|+.+.. + ..|.|++++.+|+ |
T Consensus 5 ~v~~~~G~~v~L~C~~~~~--~~~~~v~W~r~~~~~~~~~l~~~~~~~~~~~~R~~~~~~~~~~~~~L~I~~~~~~Ds-G 81 (110)
T 2q87_A 5 TVAGPVGGSLSVQCPYEKE--HRTLNKYWCRPPQIFLCDKIVETKGSAGKRNGRVSIRDSPANLSFTVTLENLTEEDA-G 81 (110)
T ss_dssp EEEECTTSCEEEEEECCGG--GTTSEEEEESCCSSSSCCCSEESSSTTCSEETTEEEEEEGGGTEEEEEESSCCGGGC-E
T ss_pred EEEEeCCCcEEEEeEecCC--cCCceEEEEecCCCCCCeEEEEeCCccccccCCEEEEEcCcCCEEEEEEccCCHHHC-E
Confidence 4577899999999998642 1235799998642 1 1 1110000 0135776642 2 2799999999999 9
Q ss_pred ceEEEeeecC-------cceEEEeeeCC
Q psy12724 143 SYQCRTKHRL-------TGETRLSATKG 163 (167)
Q Consensus 143 ~Y~C~a~n~~-------~~~~~l~~~~~ 163 (167)
.|.|.+.+.. ..++.|.+.|+
T Consensus 82 ~Y~C~~~~~~~g~~~~~~~~v~v~V~p~ 109 (110)
T 2q87_A 82 TYWCGVDTPWLQDFHDPVVEVEVSVFPA 109 (110)
T ss_dssp EEEEEEECTTSCCBCCCSEEEEEEEC--
T ss_pred EEEEEEecCccCccCCccEEEEEEEecC
Confidence 9999999873 23555666554
No 450
>2zg1_A Sialic acid-binding IG-like lectin 5; siglec-5 inhibitory receptor, two-domain structure, V-SET, C2-SET, IG-like domain, 6'-sialyllactose complex; HET: SIA; 2.70A {Homo sapiens} PDB: 2zg3_A* 2zg2_A
Probab=98.95 E-value=1.9e-09 Score=80.12 Aligned_cols=80 Identities=20% Similarity=0.238 Sum_probs=55.6
Q ss_pred ecCeEEEeCCcEEEEeeeCCc----cCCcceeEEEEeCCCe-----eeEEee-----eecCCceEEEccC-----CeEEE
Q psy12724 72 IMDEHVLKGNSAVLKCHIPSF----VADYVAVESWISDQGE-----ELFVDM-----TESTDGKYLVLPS-----GELHI 132 (167)
Q Consensus 72 ~~~~~v~~G~~a~l~C~~~~~----~~~p~p~i~W~k~~~~-----~l~~~~-----~~~~~~r~~~~~~-----g~L~I 132 (167)
+.+..+.+|++|.|+|.+.+. ...+.+.+.|+|++.. .+.... .+...+|+.+..+ +.|.|
T Consensus 7 p~~v~v~~G~~v~L~C~~~~~~~~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~sL~I 86 (214)
T 2zg1_A 7 QKSVTVQEGLCVLVPCSFSYPWRSWYSSPPLYVYWFRDGEIPYYAEVVATNNPDRRVKPETQGRFRLLGDVQKKNCSLSI 86 (214)
T ss_dssp CSEEEEETTCCEEECCEEECCCCCCSCCCCEEEEEEETTCCGGGCCBSEESCTTSCBCTTTTTTEEECSCGGGTBCCEEE
T ss_pred CcEEEEecCccEEEeeeeecCCcccCCCCceEEEEEecCCCCcccceEecCCcccccCccccCceEEeccCCCCeEEEEE
Confidence 345678899999999998531 0125788999998631 111100 0112467877643 37999
Q ss_pred eecCcCCCCcceEEEeeecC
Q psy12724 133 RDVGPEDGYKSYQCRTKHRL 152 (167)
Q Consensus 133 ~~v~~~D~~G~Y~C~a~n~~ 152 (167)
++++.+|+ |.|.|.+.|..
T Consensus 87 ~~v~~~D~-G~Y~C~~~~~~ 105 (214)
T 2zg1_A 87 GDARMEDT-GSYFFRVERGR 105 (214)
T ss_dssp CSCCGGGC-EEEEEEEEETT
T ss_pred ccCCHhhC-ceEEEEEEcCC
Confidence 99999999 99999999874
No 451
>2p1y_A Bispecific alpha/beta TCR; autoimmunity, immunoglobulin fold, diabody, immune system; 2.42A {Mus musculus} PDB: 1bwm_A
Probab=98.94 E-value=2.8e-09 Score=80.72 Aligned_cols=76 Identities=14% Similarity=0.218 Sum_probs=51.8
Q ss_pred ecCeEEEeCCcEEEEeeeCCccCCcceeEEEEeCC-Ceee--EEee-------eecCCceEEEcc----CCeEEEeecCc
Q psy12724 72 IMDEHVLKGNSAVLKCHIPSFVADYVAVESWISDQ-GEEL--FVDM-------TESTDGKYLVLP----SGELHIRDVGP 137 (167)
Q Consensus 72 ~~~~~v~~G~~a~l~C~~~~~~~~p~p~i~W~k~~-~~~l--~~~~-------~~~~~~r~~~~~----~g~L~I~~v~~ 137 (167)
+.+..+.+|++|+|+|. . +.|.|.++|+|++ +..+ .... .....+|+.+.. +..|.|++++.
T Consensus 7 p~~~~v~~G~~v~L~C~-~---~~~~~~i~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~L~I~~v~~ 82 (238)
T 2p1y_A 7 PRNKVAVTGGKVTLSCN-Q---TNNHNNMYWYRQDTGHGLRLIHYSYGAGSTEKGDIPDGYKASRPSQENFSLILELATP 82 (238)
T ss_dssp CSEEEEETTCCEEEEEE-E---CSCCSEEEEEEEETTTEEEEEEEESSTTCCEECSSCTTCEEECCSSSBCEEEESSCCG
T ss_pred ccceEEeCCCEEEEEee-c---CCCCccEEEEEECCCCCcEEEEEEecCcceeCCCccceEEEEccCCceEEEEEecCCc
Confidence 44567899999999999 4 4588899999962 1111 0000 001135666543 34799999999
Q ss_pred CCCCcceEEEeeecC
Q psy12724 138 EDGYKSYQCRTKHRL 152 (167)
Q Consensus 138 ~D~~G~Y~C~a~n~~ 152 (167)
+|+ |.|.|.|.|..
T Consensus 83 ~Ds-G~Y~C~~~~~~ 96 (238)
T 2p1y_A 83 SQT-SVYFCASGDLG 96 (238)
T ss_dssp GGC-EEEEEEEEC--
T ss_pred ccC-eeEEEEEEeCC
Confidence 999 99999999863
No 452
>3q5y_A TCR N15 beta; IG, T cell receptor, antigen peptide/MHC, membrane, immune S; HET: EPE; 1.90A {Mus musculus} PDB: 1nfd_B* 3q5t_A
Probab=98.94 E-value=4.8e-09 Score=79.71 Aligned_cols=72 Identities=22% Similarity=0.309 Sum_probs=50.1
Q ss_pred cCeEEEeCCcEEEEeeeCCccCCcceeEEEEeCC-Cee---eEEe------eeecCCceEEEcc----CCeEEEeecCcC
Q psy12724 73 MDEHVLKGNSAVLKCHIPSFVADYVAVESWISDQ-GEE---LFVD------MTESTDGKYLVLP----SGELHIRDVGPE 138 (167)
Q Consensus 73 ~~~~v~~G~~a~l~C~~~~~~~~p~p~i~W~k~~-~~~---l~~~------~~~~~~~r~~~~~----~g~L~I~~v~~~ 138 (167)
.+..+.+|++|.|+|.+.+ |.+.+.|+|.. +.. +... ......+|+.+.. +..|.|++++.+
T Consensus 10 ~~v~v~~G~~v~L~C~~~~----~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~sL~I~~v~~~ 85 (240)
T 3q5y_A 10 RHIIKEKGGRSVLTCIPIS----GHSNVVWYQQTLGKELKFLIQHYEKVERDKGFLPSRFSVQQFDDYHSEMNMSALELE 85 (240)
T ss_dssp SEEEEETTCCEEEEEECCT----TCCEEEEEEECTTSCCEEEEEEETTEEEEECSCCTTEEEEECTTSCEEEEECSCCGG
T ss_pred ceeeecCCCcEEEEEEeCC----CCceEEEEEECCCCCCEEEEEEcCCccccCcccCCeEEEEeCCCCEEEEEECcCChh
Confidence 4567889999999999863 67789999822 111 1000 0001235776654 236999999999
Q ss_pred CCCcceEEEee
Q psy12724 139 DGYKSYQCRTK 149 (167)
Q Consensus 139 D~~G~Y~C~a~ 149 (167)
|+ |.|.|.+.
T Consensus 86 D~-G~Y~C~~~ 95 (240)
T 3q5y_A 86 DS-AMYFCASS 95 (240)
T ss_dssp GC-EEEEEEEE
T ss_pred HC-EEEEEEEc
Confidence 99 99999997
No 453
>2qhl_A Novel immune-type receptor 10; immunoglobulin variable domain-like beta-sandwich, immune system; 1.56A {Ictalurus punctatus} PDB: 3b5t_A 2qjd_A 2qte_A 2qqq_A
Probab=98.94 E-value=2.7e-09 Score=72.80 Aligned_cols=73 Identities=18% Similarity=0.384 Sum_probs=51.0
Q ss_pred eEEEeCCcEEEEeeeC-CccCCcceeEEEEeCC-Ce---eeEEeee--------ecC-CceEEEccCC---eEEEeecCc
Q psy12724 75 EHVLKGNSAVLKCHIP-SFVADYVAVESWISDQ-GE---ELFVDMT--------EST-DGKYLVLPSG---ELHIRDVGP 137 (167)
Q Consensus 75 ~~v~~G~~a~l~C~~~-~~~~~p~p~i~W~k~~-~~---~l~~~~~--------~~~-~~r~~~~~~g---~L~I~~v~~ 137 (167)
..+.+|++|+|+|.+. +. +.+.+.|+|.. +. .+..... +.. .+|+.+..++ .|.|++++.
T Consensus 9 ~~~~~G~~v~L~C~~~~~~---~~~~v~W~rq~~~~~~~~l~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~L~I~~~~~ 85 (111)
T 2qhl_A 9 KTVKRGENVTMECSMSKVK---DKDKLAWYRQSFGKVPQYFVRYYSSNSGYKFAEGFKDSRFSMTVNDQKFDLNIIGTRE 85 (111)
T ss_dssp EECCTTCCEEECCBCTTCS---CGGGEEEEEECTTBCCEEEEEECSSSSCEEECTTCCCTTEEEEESSSBEEEEESSCCG
T ss_pred EEEeCCCCEEEEEEccCCc---ccceEEEEEecCCCCCEEEEEEeccCCccccccCCCCCcEEEEEcCCeEEEEECCCCh
Confidence 4677899999999986 43 45678999853 11 1211110 001 4677765433 699999999
Q ss_pred CCCCcceEEEeeec
Q psy12724 138 EDGYKSYQCRTKHR 151 (167)
Q Consensus 138 ~D~~G~Y~C~a~n~ 151 (167)
+|+ |.|.|.+.|.
T Consensus 86 ~Ds-G~Y~C~~~~~ 98 (111)
T 2qhl_A 86 DDG-GEYFCGEVEG 98 (111)
T ss_dssp GGC-EEEEEEEEET
T ss_pred hHC-EEEEEEEccC
Confidence 999 9999999985
No 454
>2i24_N NEW antigen receptor PBLA8; immunoglobulin fold, immune system; 1.35A {Ginglymostoma cirratum} PDB: 2i25_N 2i27_N 2i26_N
Probab=98.93 E-value=7.7e-09 Score=72.20 Aligned_cols=74 Identities=20% Similarity=0.364 Sum_probs=50.9
Q ss_pred cCeEEEeCCcEEEEeeeCCccCCcceeEEEEeCC-CeeeEEeeeecCCceEEEc---c--CCeEEEeecCcCCCCcceEE
Q psy12724 73 MDEHVLKGNSAVLKCHIPSFVADYVAVESWISDQ-GEELFVDMTESTDGKYLVL---P--SGELHIRDVGPEDGYKSYQC 146 (167)
Q Consensus 73 ~~~~v~~G~~a~l~C~~~~~~~~p~p~i~W~k~~-~~~l~~~~~~~~~~r~~~~---~--~g~L~I~~v~~~D~~G~Y~C 146 (167)
.+..+.+|++|+|.|.+.+. ..+.+.+.|+|.. +....... ...+|+.+. . +..|.|++++.+|+ |.|.|
T Consensus 8 ~~v~v~~G~~vtL~C~~s~~-~~~~~~v~Wyrq~~g~~~~~~~--~~~~R~~~~~~~~~~~~~L~I~~~~~~Ds-G~Y~C 83 (121)
T 2i24_N 8 QRITKETGESLTINCVVRDS-RCVLSTGYWYRKPPGSRNEESI--SDGGRYVETVNRGSKSFSLRINDLTVKDS-GTYRC 83 (121)
T ss_dssp SEEEEETTCCEEEEEEECSC-CCCEEEEEEEEECTTCSCCEEE--CSBTTEEEEEETTTTEEEEEECSCCGGGC-EEEEE
T ss_pred cEEEEecCCcEEEEeEccCC-CCCCCEEEEEEeCCCCCceeeE--ecCCCeEEEecCCCCEEEEEECCCChhhC-EEEEE
Confidence 34678899999999999643 1145789999864 11110011 135677653 1 23699999999999 99999
Q ss_pred Eeee
Q psy12724 147 RTKH 150 (167)
Q Consensus 147 ~a~n 150 (167)
.+..
T Consensus 84 ~~~~ 87 (121)
T 2i24_N 84 KPES 87 (121)
T ss_dssp EEEE
T ss_pred EEec
Confidence 9974
No 455
>3juy_B 3B3 single chain variant HIV-1 antibody; envelope protein GP120, broadly neutralizing antibody, 3B3 single chain variable fragment, immune system; 2.50A {Homo sapiens}
Probab=98.93 E-value=2.8e-09 Score=81.99 Aligned_cols=80 Identities=14% Similarity=0.209 Sum_probs=55.1
Q ss_pred EEecCeEEEeCCcEEEEeeeCCccCCcceeEEEEeCC-Cee---eEEee--------eecCCceEEEccCC-----eEEE
Q psy12724 70 VNIMDEHVLKGNSAVLKCHIPSFVADYVAVESWISDQ-GEE---LFVDM--------TESTDGKYLVLPSG-----ELHI 132 (167)
Q Consensus 70 c~~~~~~v~~G~~a~l~C~~~~~~~~p~p~i~W~k~~-~~~---l~~~~--------~~~~~~r~~~~~~g-----~L~I 132 (167)
-.+.+..+.+|++|+|+|.+.+. ..|.+.+.|+|.. +.. +.... .+...+|+.+..++ .|.|
T Consensus 11 ~~~~~~~v~~G~~v~L~C~~~~~-~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~~L~I 89 (256)
T 3juy_B 11 VQSGAEVKKPGASVKVSCQASGY-RFSHFTVHWVRQAPGQRFEWMGWINPYNGNKEFSAKFQDRVTFTADTSANTAYMEL 89 (256)
T ss_dssp EECCCEEECTTCCEEEEEEEESS-CGGGSCEEEEEECTTSCCEEEEEEETTTTEEEECTTTTTTEEEEEETTTTEEEEEE
T ss_pred EecCCceecCCCeEEEEEEeecc-cccCceEEEEEECCCCCcEEEEEEEcCCCcEeecccCcceEEEEEecCCCEEEEEE
Confidence 34456788899999999999752 1267889999742 111 11000 00123578776322 5999
Q ss_pred eecCcCCCCcceEEEeeec
Q psy12724 133 RDVGPEDGYKSYQCRTKHR 151 (167)
Q Consensus 133 ~~v~~~D~~G~Y~C~a~n~ 151 (167)
++++.+|+ |.|.|.|.|.
T Consensus 90 ~~v~~~Ds-G~Y~C~~~~~ 107 (256)
T 3juy_B 90 RSLRSADT-AVYYCARVGE 107 (256)
T ss_dssp CSCCGGGC-EEEEEEECCC
T ss_pred CCCCcccC-EEEEEeEEec
Confidence 99999999 9999999997
No 456
>1qok_A MFE-23 recombinant antibody fragment; immunoglobulin, single-chain FV, anti-carcinoembryonic antigen; 2.4A {Mus musculus} SCOP: b.1.1.1 b.1.1.1
Probab=98.93 E-value=3e-09 Score=83.36 Aligned_cols=80 Identities=20% Similarity=0.271 Sum_probs=55.3
Q ss_pred EecCeEEEeCCcEEEEeeeCCccCCcceeEEEEeCCC-eee--EEee---------eecCCceEEEcc-----CCeEEEe
Q psy12724 71 NIMDEHVLKGNSAVLKCHIPSFVADYVAVESWISDQG-EEL--FVDM---------TESTDGKYLVLP-----SGELHIR 133 (167)
Q Consensus 71 ~~~~~~v~~G~~a~l~C~~~~~~~~p~p~i~W~k~~~-~~l--~~~~---------~~~~~~r~~~~~-----~g~L~I~ 133 (167)
.+.+..+.+|++|+|+|.+.+. ..+.|.+.|+|++. ..+ .... .+...+|+.+.. ++.|.|+
T Consensus 32 ~p~~~~v~~G~~v~L~C~~~g~-~~~~~~v~W~r~~~~~~~~~l~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~sL~I~ 110 (282)
T 1qok_A 32 QSGAELVRSGTSVKLSCTASGF-NIKDSYMHWLRQGPEQGLEWIGWIDPENGDTEYAPKFQGKATFTTDTSSNTAYLQLS 110 (282)
T ss_dssp ECCCEEEETTCCEEEEEEEESS-CGGGSCEEEEEECTTCCEEEEEEEETTTTEEEECGGGBTTEEEEEETTTTEEEEEEC
T ss_pred CCCCEEEeCCCeEEEEEeccCC-CCCCceEEEEEeCCCCCcEEEEEEecCCCccccCchhcCcEEEEEecCCCeEEEEEC
Confidence 3456788999999999998743 11367899999641 111 1000 001236776653 2479999
Q ss_pred ecCcCCCCcceEEEeeecC
Q psy12724 134 DVGPEDGYKSYQCRTKHRL 152 (167)
Q Consensus 134 ~v~~~D~~G~Y~C~a~n~~ 152 (167)
+++.+|+ |.|.|.+.|..
T Consensus 111 ~v~~~Ds-G~Y~C~~~n~~ 128 (282)
T 1qok_A 111 SLTSEDT-AVYYCNEGTPT 128 (282)
T ss_dssp SCCGGGC-EEEEEEEECSS
T ss_pred cCChhhC-EEEEEEeccCC
Confidence 9999999 99999999874
No 457
>1c5d_H Monoclonal antibody against the main immunogenic the human muscle acetylcholine receptor...; immunoglobulin, immune system; 2.40A {Rattus norvegicus} SCOP: b.1.1.1 b.1.1.2 PDB: 2arj_H 3b9k_H* 2gk0_H 2gjz_H 1fn4_B 3mj8_H 3mj9_H*
Probab=98.93 E-value=4.6e-09 Score=78.97 Aligned_cols=88 Identities=15% Similarity=0.217 Sum_probs=58.8
Q ss_pred ecCeEEEeCCcEEEEeeeCCccCCcceeEEEEeCC-Cee---eEEee-------eecCCceEEEcc---C--CeEEEeec
Q psy12724 72 IMDEHVLKGNSAVLKCHIPSFVADYVAVESWISDQ-GEE---LFVDM-------TESTDGKYLVLP---S--GELHIRDV 135 (167)
Q Consensus 72 ~~~~~v~~G~~a~l~C~~~~~~~~p~p~i~W~k~~-~~~---l~~~~-------~~~~~~r~~~~~---~--g~L~I~~v 135 (167)
+.+..+.+|++|.|+|.+.+. ..+.+.+.|+|++ +.. +.... .+...+|+.+.. + ..|.|+++
T Consensus 7 p~~~~v~~G~~v~L~C~~~~~-~~~~~~v~W~r~~~~~~~~~l~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~~L~I~~v 85 (215)
T 1c5d_H 7 SGPGLVQPSQTLSLTCTVSGF-PLTTNGVSWVRQPPGKGLEWIAAISSGGSPYYNSALKSRLSINRDTSKSQVFLKMNSL 85 (215)
T ss_dssp ECCCEECTTCCEEEEEEECSS-CTTSCCEEEEEECTTSCCEEEEEECTTCCEECCTTTGGGEEEEEETTTTEEEEEESSC
T ss_pred CCCeeecCCCcEEEEEEECCC-cCCCCeEEEEEECCCCCcEEEEEEcCCCCcEECCcccCcEEEEeeCCCceEEEEECCC
Confidence 445678899999999999753 1125789999863 111 11100 001246787653 1 27999999
Q ss_pred CcCCCCcceEEEeeecC------cceEEEeee
Q psy12724 136 GPEDGYKSYQCRTKHRL------TGETRLSAT 161 (167)
Q Consensus 136 ~~~D~~G~Y~C~a~n~~------~~~~~l~~~ 161 (167)
+.+|+ |.|.|.+.|.. ...+.|.+.
T Consensus 86 ~~~D~-G~Y~C~~~~~~~~~~~~~~~~~L~V~ 116 (215)
T 1c5d_H 86 QTEDT-AIYFCTREDGWNYFDYWGPGTMVTVS 116 (215)
T ss_dssp CGGGC-EEEEEEECCSSSCSCCBCCCEEEEEC
T ss_pred CcccC-EEEEEEEecCCcccceEcCCEEEEec
Confidence 99999 99999999862 234666664
No 458
>1sy6_A T-cell surface glycoprotein CD3 gamma/epsilon chain; CD3 epsilon, OKT3 FAB, signaling protein/antibiotic complex; 2.10A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 PDB: 2atp_E*
Probab=98.93 E-value=2e-09 Score=80.90 Aligned_cols=65 Identities=12% Similarity=0.215 Sum_probs=50.0
Q ss_pred EeCCcEEEEeeeCCccCCcceeEEEEeCCCeeeEEeeeecCCceEEEccCCeEEEeecCcCCCCcceEEEeeecCcceEE
Q psy12724 78 LKGNSAVLKCHIPSFVADYVAVESWISDQGEELFVDMTESTDGKYLVLPSGELHIRDVGPEDGYKSYQCRTKHRLTGETR 157 (167)
Q Consensus 78 ~~G~~a~l~C~~~~~~~~p~p~i~W~k~~~~~l~~~~~~~~~~r~~~~~~g~L~I~~v~~~D~~G~Y~C~a~n~~~~~~~ 157 (167)
.+|++++|.|.+ |.|.++|+||+ ..+... ...++.|.|.+++.+|+ |.|+|.+.|..+....
T Consensus 16 ~~G~~v~L~C~~------p~~~i~W~k~g-~~l~~~----------~~~~~~L~i~~v~~~Ds-G~Y~C~~~~~~s~~~~ 77 (204)
T 1sy6_A 16 QEDGSVLLTCDA------EAKNITWFKDG-KMIGFL----------TEDKKKWNLGSNAKDPR-GMYQCKGSQNKSKPLQ 77 (204)
T ss_dssp CSSSEEEEEECS------CSSEEEEEETT-EEEEEE----------ESSCCCEEEEEGGGCCE-EEEEEESSSSCCCCEE
T ss_pred cCCCeEEEEEcC------CCCEEEEEECC-EECCCC----------CCCCCeEEeCCCCcCCC-EEEEEEecCCCCeeEE
Confidence 479999999998 56789999997 555321 12467899999999999 9999998876655455
Q ss_pred Eee
Q psy12724 158 LSA 160 (167)
Q Consensus 158 l~~ 160 (167)
+.+
T Consensus 78 v~v 80 (204)
T 1sy6_A 78 VYY 80 (204)
T ss_dssp EEE
T ss_pred EEE
Confidence 544
No 459
>2fbj_H IGA-kappa J539 FAB (heavy chain); immunoglobulin; HET: NAG FUC; 1.95A {Mus musculus} SCOP: b.1.1.1 b.1.1.2 PDB: 1mcp_H 2mcp_H*
Probab=98.92 E-value=5.6e-09 Score=78.85 Aligned_cols=88 Identities=23% Similarity=0.252 Sum_probs=58.5
Q ss_pred ecCeEEEeCCcEEEEeeeCCccCCcceeEEEEeCC-Cee---eEEee--------eecCCceEEEccC-----CeEEEee
Q psy12724 72 IMDEHVLKGNSAVLKCHIPSFVADYVAVESWISDQ-GEE---LFVDM--------TESTDGKYLVLPS-----GELHIRD 134 (167)
Q Consensus 72 ~~~~~v~~G~~a~l~C~~~~~~~~p~p~i~W~k~~-~~~---l~~~~--------~~~~~~r~~~~~~-----g~L~I~~ 134 (167)
+....+.+|++|+|+|.+.+.. ...+.+.|+|+. +.. +.... .+...+|+.+..+ ..|.|++
T Consensus 7 ~~~~~v~~G~~v~L~C~~~~~~-~~~~~v~W~r~~~~~~~~~l~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~~L~I~~ 85 (220)
T 2fbj_H 7 SGGGLVQPGGSLKLSCAASGFD-FSKYWMSWVRQAPGKGLEWIGEIHPDSGTINYTPSLKDKFIISRDNAKNSLYLQMSK 85 (220)
T ss_dssp ECCEEECTTCCEEEEEEEESSC-GGGSCEEEEEECTTSCEEEEEEECTTSSCEEECTTTTTTEEEEECSSSCEEEEEECS
T ss_pred CCCeEecCCCcEEEEEEecCcc-CCCceEEEEEECCCCCeEEEEEEccCCCceecCCccCCcEEEEeeCCCCEEEEEECC
Confidence 3456788999999999997431 025789999853 111 11100 0012468877643 3799999
Q ss_pred cCcCCCCcceEEEeeecC------cceEEEeee
Q psy12724 135 VGPEDGYKSYQCRTKHRL------TGETRLSAT 161 (167)
Q Consensus 135 v~~~D~~G~Y~C~a~n~~------~~~~~l~~~ 161 (167)
++.+|+ |.|.|.+.|.. ...+.|.+.
T Consensus 86 v~~~Ds-G~Y~C~~~~~~~~~~~~~~~~~L~V~ 117 (220)
T 2fbj_H 86 VRSEDT-ALYYCARLHYYGYNAYWGQGTLVTVS 117 (220)
T ss_dssp CCGGGC-EEEEEEEEETTTEEEEECCCEEEEEC
T ss_pred CChhhC-EEEEEEEeccccccceecCCEEEEec
Confidence 999999 99999999863 334566664
No 460
>1tvd_A T cell receptor, ES204 V delta; immunoreceptor, TCR, delta chain, variable domain; 1.90A {Homo sapiens} SCOP: b.1.1.1
Probab=98.92 E-value=3.2e-09 Score=72.81 Aligned_cols=76 Identities=24% Similarity=0.327 Sum_probs=51.5
Q ss_pred cCeEEEeCCcEEEEeeeCCccCCcceeEEEEeCC-Cee---eEEee------eecCCceEEEcc---CC--eEEEeecCc
Q psy12724 73 MDEHVLKGNSAVLKCHIPSFVADYVAVESWISDQ-GEE---LFVDM------TESTDGKYLVLP---SG--ELHIRDVGP 137 (167)
Q Consensus 73 ~~~~v~~G~~a~l~C~~~~~~~~p~p~i~W~k~~-~~~---l~~~~------~~~~~~r~~~~~---~g--~L~I~~v~~ 137 (167)
....+.+|++|+|+|.+... .+.+.+.|+|.. +.. +.... .+...+|+.+.. ++ .|.|++++.
T Consensus 8 ~~~~~~~G~~vtL~C~~~~~--~~~~~v~W~r~~~~~~~~~l~~~~~~~~~~~~~~~~R~~~~~~~~~~~~~L~I~~~~~ 85 (116)
T 1tvd_A 8 PDQTVASGSEVVLLCTYDTV--YSNPDLFWYRIRPDYSFQFVFYGDDSRSEGADFTQGRFSVKHILTQKAFHLVISPVRT 85 (116)
T ss_dssp CCEEEETTCCEEECCEEECC--SSSCCEEEEEECTTSCEEEEEEECSSCEEECGGGTTTEEEEEEGGGTEEEEEESSCCG
T ss_pred CcEEEecCCeEEEEeEeEcC--CCCcEEEEEEeCCCCCcEEEEEECCcccccCcccCCCEEEEEecCCCEEEEEEccCCh
Confidence 44678899999999998532 145678998853 111 11100 001246777642 22 699999999
Q ss_pred CCCCcceEEEeeec
Q psy12724 138 EDGYKSYQCRTKHR 151 (167)
Q Consensus 138 ~D~~G~Y~C~a~n~ 151 (167)
+|+ |.|.|.+.+.
T Consensus 86 ~Ds-G~Y~C~~~~~ 98 (116)
T 1tvd_A 86 EDS-ATYYCAFTLP 98 (116)
T ss_dssp GGC-EEEEEEEECT
T ss_pred HHC-EEEEEEEeCC
Confidence 999 9999999984
No 461
>3qhz_H Human monoclonal antibody DEL2D1, FAB heavy chain; immunoglobulin, immune recognition, influenza A hemagglutini system; 1.55A {Homo sapiens} PDB: 3lzf_H* 3qrg_H* 3mod_H 3mob_H 3moa_H 3lev_H* 3idg_B 3d0l_B 3d0v_B 3idi_B 3idj_B 3idm_B* 3idn_B* 1tjg_H* 1tjh_H* 1tji_H* 2pr4_H 3drq_B 2p8m_B 2p8p_B ...
Probab=98.92 E-value=9.4e-09 Score=78.01 Aligned_cols=68 Identities=19% Similarity=0.338 Sum_probs=43.3
Q ss_pred EeCCcEEEEeeeCCccCCc-ceeEEEEeCCCeeeEEee---eecCCceEEEccCCeEEEeecCcCCCCcceEEEeeecC
Q psy12724 78 LKGNSAVLKCHIPSFVADY-VAVESWISDQGEELFVDM---TESTDGKYLVLPSGELHIRDVGPEDGYKSYQCRTKHRL 152 (167)
Q Consensus 78 ~~G~~a~l~C~~~~~~~~p-~p~i~W~k~~~~~l~~~~---~~~~~~r~~~~~~g~L~I~~v~~~D~~G~Y~C~a~n~~ 152 (167)
..|+.+.|.|.+.+.. | ...++|+|++ ..+.... ....++.|.+. ..|.|.+....| |.|+|.|.|..
T Consensus 145 ~~g~~v~L~C~~~~~~--P~~~~v~W~~~g-~~~~~~~~~~~~~~~g~~~~~--s~L~i~~~~~~~--g~ytC~v~~~~ 216 (232)
T 3qhz_H 145 TSGGTAALGCLVKDYF--PEPVTVSWNSGA-LTSGVHTFPAVLQSSGLYSLS--SVVTVPSSSLGT--QTYICNVNHKP 216 (232)
T ss_dssp ---CEEEEEEEEEEEB--SSCCEEEEGGGT-BCTTEEECCCEECTTSCEEEE--EEEEEEGGGGGT--CCCEEEEEEGG
T ss_pred cCCCcEEEEEEEeeEe--CCCeEEEEEECC-EecceeeccceeCCCCCEEEE--EEEEEchhhcCC--CEEEEEEEeCC
Confidence 3588999999997641 3 3357899987 3221000 01224445442 469999988877 89999999986
No 462
>1fo0_B Protein (BM3.3 T cell receptor beta-chain); class I MHC, H-2KB, TCR-PMHC complex, immune system; 2.50A {Mus musculus} SCOP: b.1.1.1 PDB: 1nam_B* 2ol3_B* 1kb5_B 1kj2_B*
Probab=98.92 E-value=5.8e-09 Score=71.37 Aligned_cols=74 Identities=22% Similarity=0.341 Sum_probs=50.0
Q ss_pred CeEEEeCCcEEEEeeeCCccCCcceeEEEEeCC-Ce-e--eEEeee----e--cC-CceEEEccC--CeEEEeecCcCCC
Q psy12724 74 DEHVLKGNSAVLKCHIPSFVADYVAVESWISDQ-GE-E--LFVDMT----E--ST-DGKYLVLPS--GELHIRDVGPEDG 140 (167)
Q Consensus 74 ~~~v~~G~~a~l~C~~~~~~~~p~p~i~W~k~~-~~-~--l~~~~~----~--~~-~~r~~~~~~--g~L~I~~v~~~D~ 140 (167)
+..+.+|++|+|+|.+.+. +.+.+.|+|.. +. + +..... . .. ++||.+..+ ..|.|++++.+|+
T Consensus 10 ~~~v~~G~~vtL~C~~~~~---~~~~v~W~rq~~~~~~~~l~~~~~~~~~~~~~~~~~Rf~~~~~~~~~L~I~~~~~~Ds 86 (112)
T 1fo0_B 10 WRLVPRGQAVNLRCILKNS---QYPWMSWYQQDLQKQLQWLFTLRSPGDKEVKSLPGADYLATRVTDTELRLQVANMSQG 86 (112)
T ss_dssp EEECCTTCCEEEEEEESCT---TCCEEEEEEECTTCCEEEEEECCSTTCEEEEEETTEEEEEEEEETTEEEEEEESCCSC
T ss_pred eEEEecCCcEEEEEEeCCC---CCceEEEEEECCCCCCEEEEEEeCCCceecCccccCCEEEEcCCCCeEEEcCCCHhHC
Confidence 3567799999999998642 45678999853 11 1 111000 0 01 267765421 2899999999999
Q ss_pred CcceEEEeeec
Q psy12724 141 YKSYQCRTKHR 151 (167)
Q Consensus 141 ~G~Y~C~a~n~ 151 (167)
|.|.|.+.+.
T Consensus 87 -g~Y~C~~~~~ 96 (112)
T 1fo0_B 87 -RTLYCTCSAD 96 (112)
T ss_dssp -EEEEEEEESS
T ss_pred -EEEEEEEEcC
Confidence 9999999875
No 463
>1p6f_A NKP46, natural cytotoxicity triggering receptor 1; natural cytotoxicity receptor, NK cell receptor, immunoglobulin fold, immune system; 2.20A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4
Probab=98.91 E-value=3.8e-09 Score=81.77 Aligned_cols=76 Identities=14% Similarity=0.061 Sum_probs=53.0
Q ss_pred EEEeCCcEEEEeeeCCccCCcceeEEEEeCCCeeeEEeeeecCCceEEEccCCeEEEeecCcCCCCcceEEEeeecC---
Q psy12724 76 HVLKGNSAVLKCHIPSFVADYVAVESWISDQGEELFVDMTESTDGKYLVLPSGELHIRDVGPEDGYKSYQCRTKHRL--- 152 (167)
Q Consensus 76 ~v~~G~~a~l~C~~~~~~~~p~p~i~W~k~~~~~l~~~~~~~~~~r~~~~~~g~L~I~~v~~~D~~G~Y~C~a~n~~--- 152 (167)
.+.+|++++|.|.+.+ +.+.+.|+|++ ..+... .........++.|.|.+++.+|+ |.|+|.+.|..
T Consensus 17 ~v~~G~~VtL~C~~~~----~~~~~~w~k~g-~~~~~~----~~~~~~~~~~~~L~I~~v~~~Ds-G~Y~C~~~~~~~~s 86 (242)
T 1p6f_A 17 MVPKEKQVTICCQGNY----GAVEYQLHFEG-SLFAVD----RPKPPERINKVKFYIPDMNSRMA-GQYSCIYRVGELWS 86 (242)
T ss_dssp EEETTCCEEEEEECCT----TCCEEEEEETT-EEEEEE----CCSSCTTCCEEEEEECSCCGGGC-EEEEEEEEETTEEC
T ss_pred ccCCCCcEEEEEeeCC----CCcEEEEEECC-Cccccc----cccccCCcceeEEEecCCCcccC-eEEEEEEecCCccc
Confidence 7889999999999863 34578999997 444311 11111112356899999999999 99999998752
Q ss_pred --cceEEEeee
Q psy12724 153 --TGETRLSAT 161 (167)
Q Consensus 153 --~~~~~l~~~ 161 (167)
+..+.|.++
T Consensus 87 ~~S~~~~L~V~ 97 (242)
T 1p6f_A 87 EPSNLLDLVVT 97 (242)
T ss_dssp CCCCCEEEEEE
T ss_pred cCCcceEEEee
Confidence 344555554
No 464
>1dlf_L Anti-dansyl immunoglobulin IGG2A(S); FV fragment; 1.45A {Mus musculus} SCOP: b.1.1.1 PDB: 1wz1_L* 2dlf_L 1maj_A 1mak_A 1ktr_L 2cju_L* 2uud_K* 1dsf_L 3nn8_B 1n4x_L 1bfv_L* 1cfv_L* 2bfv_L* 1wt5_C
Probab=98.91 E-value=6.1e-09 Score=71.14 Aligned_cols=79 Identities=19% Similarity=0.242 Sum_probs=51.7
Q ss_pred cCeEEEeCCcEEEEeeeCCccC--CcceeEEEEeCCC-e-e--eEEe---eeecCCceEEEccC---CeEEEeecCcCCC
Q psy12724 73 MDEHVLKGNSAVLKCHIPSFVA--DYVAVESWISDQG-E-E--LFVD---MTESTDGKYLVLPS---GELHIRDVGPEDG 140 (167)
Q Consensus 73 ~~~~v~~G~~a~l~C~~~~~~~--~p~p~i~W~k~~~-~-~--l~~~---~~~~~~~r~~~~~~---g~L~I~~v~~~D~ 140 (167)
.+..+.+|++|+|+|.+.+... ...+.+.|+|... . + +... ..+...+|+....+ ..|.|++++.+|+
T Consensus 9 ~~~~v~~G~~v~L~C~~~~~~~~~~~~~~v~W~rq~~~~~~~~l~~~~~~~~~~~~~R~~~~~~~~~~~L~I~~v~~~Ds 88 (113)
T 1dlf_L 9 LSLPVSLGNQASISCRSSQSLVHSNGNTYLHWYLQKPGQSPKLLIYKVSNRFSGVPDRFSGSGSGTDFTLKISRVEAEDL 88 (113)
T ss_dssp SEEEECTTCCEEEEEEESSCCBCTTSCBCEEEEEECTTSCCEEEEETTTEECTTCCTTEEEEEETTEEEEEECSCCGGGC
T ss_pred CEEEEcCCCCEEEEEEccccccccCCCceEEEEEECCCCCCeEEEEecCccCCCCCCCEEEEccCCEEEEEECCCChHHC
Confidence 3467889999999999974310 0136789998531 1 1 2110 00012457765432 2699999999999
Q ss_pred CcceEEEeeecC
Q psy12724 141 YKSYQCRTKHRL 152 (167)
Q Consensus 141 ~G~Y~C~a~n~~ 152 (167)
|.|.|.+.+..
T Consensus 89 -G~Y~C~~~~~~ 99 (113)
T 1dlf_L 89 -GVYFCSQSTHV 99 (113)
T ss_dssp -EEEEEEECSSS
T ss_pred -EEEEEEEecCC
Confidence 99999999863
No 465
>3o3u_N Maltose-binding periplasmic protein, advanced Gly END product-specific receptor; RAGE, AGER, scavenger receptor; HET: MLR; 1.50A {Escherichia coli} PDB: 3s59_A 3s58_A 3cjj_A 2l7u_A* 2e5e_A
Probab=98.91 E-value=1.3e-09 Score=93.15 Aligned_cols=75 Identities=24% Similarity=0.381 Sum_probs=56.4
Q ss_pred eEEEeCCcEEEEeeeCCccCCcceeEEEEeCCCee-eEEeeee----cCCceEEEccCCeEEEeecCcCCCCcceEEEee
Q psy12724 75 EHVLKGNSAVLKCHIPSFVADYVAVESWISDQGEE-LFVDMTE----STDGKYLVLPSGELHIRDVGPEDGYKSYQCRTK 149 (167)
Q Consensus 75 ~~v~~G~~a~l~C~~~~~~~~p~p~i~W~k~~~~~-l~~~~~~----~~~~r~~~~~~g~L~I~~v~~~D~~G~Y~C~a~ 149 (167)
..+.+|++++|+|.+.. +.|.|.++|+|++... +...... ...+|+.+..+|.|.|++++.+|+ |.|+|.+.
T Consensus 376 ~~~~~G~~v~L~C~~~~--~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~L~i~~v~~~D~-G~Y~C~~~ 452 (581)
T 3o3u_N 376 ITARIGEPLVLKCKGAP--KKPPQRLEWKLNTGRTEAWKVLSPQGGGPWDSVARVLPNGSLFLPAVGIQDE-GIFRCQAM 452 (581)
T ss_dssp EEEETTSCEEECCTTCC--SSSSCEEEEEEEETTSSSCEECCSCCSSGGGGTSEECTTSCEEESSCCGGGC-EEEEEEEE
T ss_pred cceecCCcEEEeeeecC--CCCCceEEEEEcCCeeEEEEecccCCCCCcCCcEEEcCCceEEEeccccccC-eEEEEEEE
Confidence 56789999999999832 4588999999986311 1100000 014577788889999999999999 99999999
Q ss_pred ecC
Q psy12724 150 HRL 152 (167)
Q Consensus 150 n~~ 152 (167)
|..
T Consensus 453 n~~ 455 (581)
T 3o3u_N 453 NRN 455 (581)
T ss_dssp CTT
T ss_pred cCC
Confidence 976
No 466
>3tv3_L PGT128 light chain, IG lambda-2 chain C regions; FAB, HIV-1 neutralizing antibody, GP120, immune system; HET: PCA MAN GOL EPE; 1.29A {Homo sapiens} PDB: 3tyg_L* 3twc_L* 3tnm_L 2mcg_1 1mcw_M 1a8j_L 3mcg_1 1dcl_A 1mcb_A* 1mcc_A* 1mcd_A* 1mce_A* 1mcf_A* 1mch_A 1mci_A* 1mcj_A* 1mck_A 1mcl_A* 1mcn_A* 1mcq_A ...
Probab=98.91 E-value=3.9e-09 Score=78.45 Aligned_cols=82 Identities=17% Similarity=0.266 Sum_probs=55.2
Q ss_pred CeEEEeCCcEEEEeeeCCccCCcceeEEEEeCC-CeeeE-Eeee-----ecCCceEEEcc---CCeEEEeecCcCCCCcc
Q psy12724 74 DEHVLKGNSAVLKCHIPSFVADYVAVESWISDQ-GEELF-VDMT-----ESTDGKYLVLP---SGELHIRDVGPEDGYKS 143 (167)
Q Consensus 74 ~~~v~~G~~a~l~C~~~~~~~~p~p~i~W~k~~-~~~l~-~~~~-----~~~~~r~~~~~---~g~L~I~~v~~~D~~G~ 143 (167)
+..+.+|++|.|+|.+. |.+.+.|+|++ +..+. .... ....+|+.+.. ++.|.|++++.+|+ |.
T Consensus 9 ~~~v~~G~~v~L~C~~~-----~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~D~-G~ 82 (211)
T 3tv3_L 9 SASGSPGQSITISCTGT-----SNNFVSWYQQHAGKAPKLVIYDVNKRPSGVPDRFSGSKSGNTASLTVSGLQTDDE-AV 82 (211)
T ss_dssp EEEECTTCEEEEEEECC-----CSSCEEEEEECTTSCCEEEEBTTTBCCTTSCTTEEEEEETTEEEEEEESCCGGGC-EE
T ss_pred eEEEcCCCCEEEEEEEC-----CCCeEEEEEECCCCCCEEEEEEecccCCCCcCcEEEEccCCEEEEEECCCChhHC-EE
Confidence 45678999999999985 67789999942 11111 0000 00235665432 34799999999999 99
Q ss_pred eEEEeeecC-----cceEEEeee
Q psy12724 144 YQCRTKHRL-----TGETRLSAT 161 (167)
Q Consensus 144 Y~C~a~n~~-----~~~~~l~~~ 161 (167)
|+|.|.|.. ...+.|.+.
T Consensus 83 Y~C~~~~~~~~~~~~~~~~l~V~ 105 (211)
T 3tv3_L 83 YYCGSLVGNWDVIFGGGTKLTVL 105 (211)
T ss_dssp EEEEEEETTTEEEECCCEEEEEC
T ss_pred EEEEEecCCCceeECCCceEEEe
Confidence 999999964 334555554
No 467
>3bn3_B ICAM-5, intercellular adhesion molecule 5, telencephalin; I domain, integrin, allosteric mobility, cell adhesi immune system; HET: NAG; 2.10A {Homo sapiens}
Probab=98.90 E-value=3.4e-08 Score=74.87 Aligned_cols=142 Identities=14% Similarity=0.102 Sum_probs=81.6
Q ss_pred eeEEeEEEEEeCCcEEEEeecCCCCCCcceeeEEeeCCCceeeecCCc---eE---E---EeeeEEEecC----------
Q psy12724 14 EAQVYDVFVIKGNAAVFKCNLPSFVSDHLDVVSWADTDGGQYQIDNQD---FV---V---SQSYTVNIMD---------- 74 (167)
Q Consensus 14 ~~~~~~~~v~~G~~~~l~C~a~~~~~~~~~~i~W~k~~~~~~~~~~~~---~v---~---~g~y~c~~~~---------- 74 (167)
++.|+++.|.+|+++.|.|.+.....+ .+.|...-++....++.. +. + .+.|.|....
T Consensus 6 ~v~P~~~~V~~G~Sv~l~Cs~~c~~p~---~~~~~t~l~~~~~~~g~~~~~~~ls~vs~d~~~~~C~~~c~~~~~~~~v~ 82 (196)
T 3bn3_B 6 DLQPRVAFVERGGSLWLNCSTNCPRPE---RGGLETSLRRNGTQRGLRWLARQLVDIREPETQPVCFFRCARRTLQARGL 82 (196)
T ss_dssp EEESSEEEEETTEEEEEEEEECCSSCS---EEEEECSSEEEEEEEETTEEEEEEEEECSSEECCEEEEEETTEEEEEECE
T ss_pred EEcCCCcEEcCCCeEEEEEeCCCCCCC---ccEEEEccCCeeEccccCceEEEEEEEccCCCceEEEEECCCCceEEEEE
Confidence 467788999999999999999643322 477754322222222211 11 1 3558887521
Q ss_pred ----------------eEEEeCCcEEEEeeeCCccCCcce--eEEEEeCCCeeeEEeeeecCCce-EEEccCCeEEEeec
Q psy12724 75 ----------------EHVLKGNSAVLKCHIPSFVADYVA--VESWISDQGEELFVDMTESTDGK-YLVLPSGELHIRDV 135 (167)
Q Consensus 75 ----------------~~v~~G~~a~l~C~~~~~~~~p~p--~i~W~k~~~~~l~~~~~~~~~~r-~~~~~~g~L~I~~v 135 (167)
..+.+|+.++|.|.+.+. .|.+ .|+|+|++ ..+..... .+.. -.....-.+.+..
T Consensus 83 l~Vy~~P~~v~i~~~~~~~~~G~~~tL~C~v~~~--~P~~~L~i~wlkg~-~~l~~~~~--~~~~~~~~~~t~~~~~~~- 156 (196)
T 3bn3_B 83 IRTFQRPDRVELMPLPPWQPVGENFTLSCRVPGA--GPRASLTLTLLRGA-QELIRRSF--AGEPPRARGAVLTATVLA- 156 (196)
T ss_dssp EEEEBCCCCCEECCCCSSEETTSEEEEEEEETTC--BCGGGEEEEEEETT-EEEEEEEC--TTSCTTCCCEEEEEEEEC-
T ss_pred EEEecCCCcCEEccCCccccCCCcEEEEEEeCCc--cCCCCcEEEEEeCC-EEeecccc--ccccccccceeEEEEEee-
Confidence 126789999999999864 3543 48999997 56542210 0100 0000001344444
Q ss_pred CcCCCCc-ceEEEeeecCc--c-e-EEEeeeCCee
Q psy12724 136 GPEDGYK-SYQCRTKHRLT--G-E-TRLSATKGRL 165 (167)
Q Consensus 136 ~~~D~~G-~Y~C~a~n~~~--~-~-~~l~~~~~~~ 165 (167)
..+|. | .|+|.|.|.+. + . .+-+..|.+|
T Consensus 157 ~r~D~-g~~~sC~A~l~l~~~G~~l~~~~s~p~~L 190 (196)
T 3bn3_B 157 RREDH-GANFSCRAELDLRPHGLGLFENSSAPREL 190 (196)
T ss_dssp CGGGT-TCEEEEEEEEECGGGTSCEEEEECCCEEC
T ss_pred eeccC-CCeEEEEEEccCCccCCCccccccCCeEE
Confidence 45564 6 99999999873 1 2 3444445544
No 468
>3tv3_H PGT128 heavy chain, IG gamma-1 chain C region; FAB, HIV-1 neutralizing antibody, GP120, immune system; HET: PCA MAN GOL EPE; 1.29A {Homo sapiens} PDB: 3tyg_H* 3twc_H* 3tje_H* 3thm_H* 4fqq_H 2xzc_H* 2xza_H* 3b2u_H* 3b2v_H* 3mly_H 3mlz_H 4fq2_H 2ykl_H* 3tnm_H 4fqc_H* 4fq1_H* 2yk1_H* 3mlx_H 2jix_D 2vxq_H ...
Probab=98.90 E-value=6.8e-09 Score=79.55 Aligned_cols=67 Identities=19% Similarity=0.327 Sum_probs=44.4
Q ss_pred eCCcEEEEeeeCCccCCcce-eEEEEeCCCeeeEEee---eecCCceEEEccCCeEEEeecCcCCCCcceEEEeeecC
Q psy12724 79 KGNSAVLKCHIPSFVADYVA-VESWISDQGEELFVDM---TESTDGKYLVLPSGELHIRDVGPEDGYKSYQCRTKHRL 152 (167)
Q Consensus 79 ~G~~a~l~C~~~~~~~~p~p-~i~W~k~~~~~l~~~~---~~~~~~r~~~~~~g~L~I~~v~~~D~~G~Y~C~a~n~~ 152 (167)
.|+.+.|.|.+.+. .|.+ .++|+|++ ..+.... ....++.|.+. ..|.|.+...+| |.|+|.|.|..
T Consensus 154 ~g~~v~l~C~~~~~--~p~~~~v~W~~~g-~~~~~~~~~~~~~~~g~~~~~--s~L~i~~~~~~~--~~ytC~v~h~~ 224 (239)
T 3tv3_H 154 SGGTAALGCLVKDY--FPEPVTVSWNSGA-LTSGVHTFPAVLQSSGLYSLS--SVVTVPSSSLGT--QTYICNVNHKP 224 (239)
T ss_dssp -TTEEEEEEEEEEE--BSSCCEEEEGGGT-BCTTEEECCCEECTTSCEEEE--EEEEEEGGGTTT--CCCEEEEEEGG
T ss_pred cCCcEEEEEEEeeE--eCCCeEEEEEECC-ccCceEecCceECCCCCEEEE--EEEEEchhhcCC--CEEEEEEEECC
Confidence 58899999999764 2544 47899987 3221100 01234455442 468899887766 89999999986
No 469
>3to4_D NKT vbeta2 (mouse variable domain, human constant; mouse CD1D, mouse NKT, immune system; HET: AGH NAG; 3.10A {Homo sapiens}
Probab=98.89 E-value=7.5e-09 Score=79.66 Aligned_cols=75 Identities=17% Similarity=0.369 Sum_probs=51.9
Q ss_pred cCeEEEeCCcEEEEeeeCCccCCcceeEEEEeCC-Cee--eEEeee-------ecCCc-eEEEccCCe--EEEeecCcCC
Q psy12724 73 MDEHVLKGNSAVLKCHIPSFVADYVAVESWISDQ-GEE--LFVDMT-------ESTDG-KYLVLPSGE--LHIRDVGPED 139 (167)
Q Consensus 73 ~~~~v~~G~~a~l~C~~~~~~~~p~p~i~W~k~~-~~~--l~~~~~-------~~~~~-r~~~~~~g~--L~I~~v~~~D 139 (167)
.+..+.+|++|+|+|.+.+ .+.+.+.|+|.. +.. +.-... ....+ ||.+..++. |.|++++.+|
T Consensus 9 ~~v~v~~G~~v~L~C~~~~---~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~L~I~~v~~~D 85 (253)
T 3to4_D 9 RWRLVPRGQAVNLRCILKN---SQYPWMSWYQQDLQKQLQWLFTLRSPGDKEVKSLPGADYLATRVTDTELRLQVANMSQ 85 (253)
T ss_dssp SEEEEESSCCEEEEEECSC---TTCCCEEEEEEETTCCEEEEEEECSTTCEEEEEETTEEEEEECCSSSCCEEEEESCSS
T ss_pred CeEEEeCCCcEEEEEEeCC---CCcceEEEEEECCCCCcEEEEEECCCcceecCCccCCcEEEEeCCCCeEEEccCChhh
Confidence 3467889999999999874 477889999832 111 110000 00122 787766554 9999999999
Q ss_pred CCcceEEEeeec
Q psy12724 140 GYKSYQCRTKHR 151 (167)
Q Consensus 140 ~~G~Y~C~a~n~ 151 (167)
+ |.|.|.+.+.
T Consensus 86 s-G~Y~C~~~~~ 96 (253)
T 3to4_D 86 G-RTLYCTSSAD 96 (253)
T ss_dssp C-EEEEEEEECS
T ss_pred C-eEEEEEEecC
Confidence 9 9999999854
No 470
>4i0k_A CD276 antigen; immunoglobulin domain, glycoprotein, immunity, adaptive IMMU structural genomics, protein structure initiative; HET: NAG BMA MAN; 2.97A {Mus musculus}
Probab=98.89 E-value=1.6e-09 Score=80.91 Aligned_cols=77 Identities=17% Similarity=0.244 Sum_probs=53.4
Q ss_pred eEEEeCCcEEEEeeeCCcc--CCcceeEEEEeCCCeeeEEee------eecCCceEEEcc------CCeEEEeecCcCCC
Q psy12724 75 EHVLKGNSAVLKCHIPSFV--ADYVAVESWISDQGEELFVDM------TESTDGKYLVLP------SGELHIRDVGPEDG 140 (167)
Q Consensus 75 ~~v~~G~~a~l~C~~~~~~--~~p~p~i~W~k~~~~~l~~~~------~~~~~~r~~~~~------~g~L~I~~v~~~D~ 140 (167)
..+.+|+++.|+|.+.+.. ....+.++|+|++........ .....+|+.+.. ++.|.|.+++.+|+
T Consensus 5 v~~~~G~~v~L~C~~~~~~~~~~~~~~v~W~~~~~~~~i~~~~~~~~~~~~~~~r~~~~~~~~~~~~~sL~I~~v~~~D~ 84 (222)
T 4i0k_A 5 VVALVDTDATLRCSFSPEPGFSLAQLNLIWQLTDTKQLVHSFTEGRDQGSAYSNRTALFPDLLVQGNASLRLQRVRVTDE 84 (222)
T ss_dssp CCCCTTSCEEECCBCCCCTTCCTTTEEEEEEETTTCCEEEEEETTEEEEESSCSCEECCTTTGGGTBCCEEECSCCGGGC
T ss_pred EEEECCCCeEEEEEecCCCCCCCCceEEEEEECCCccEEEEEcCCcccccceeCcEEEecccccCCeEEEEECCcccccC
Confidence 4567899999999987531 012378999998743211111 001245666654 56899999999999
Q ss_pred CcceEEEeeecC
Q psy12724 141 YKSYQCRTKHRL 152 (167)
Q Consensus 141 ~G~Y~C~a~n~~ 152 (167)
|.|+|.+.|..
T Consensus 85 -G~Y~C~~~~~~ 95 (222)
T 4i0k_A 85 -GSYTCFVSIQD 95 (222)
T ss_dssp -SCEEEEEEECC
T ss_pred -EEEEEEEEeCC
Confidence 99999999854
No 471
>3eow_R Poliovirus receptor; immunoglobulin super family, alternative splicing, cell adhesion, cell membrane, glycoprotein, HOST-virus interaction; 3.50A {Homo sapiens} PDB: 3uro_R 3epc_R* 3epd_R* 3epf_R*
Probab=98.89 E-value=1.1e-09 Score=82.13 Aligned_cols=78 Identities=17% Similarity=0.237 Sum_probs=51.6
Q ss_pred CeEEEeCCcEEEEeeeCCccCCcc--eeEEEEeCCCee-e--EEee---eecCCceEEEcc--------CCeEEEeecCc
Q psy12724 74 DEHVLKGNSAVLKCHIPSFVADYV--AVESWISDQGEE-L--FVDM---TESTDGKYLVLP--------SGELHIRDVGP 137 (167)
Q Consensus 74 ~~~v~~G~~a~l~C~~~~~~~~p~--p~i~W~k~~~~~-l--~~~~---~~~~~~r~~~~~--------~g~L~I~~v~~ 137 (167)
+..+.+|++|.|+|.+.+...++. ..++|+|++... + .... .-...+|+.+.. ++.|.|.+++.
T Consensus 8 ~v~~~~G~~v~L~C~~~~~~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~sL~I~~v~~ 87 (221)
T 3eow_R 8 QVPGFLGDSVTLPCYLQVPNMEVTHVSQLTWARHGESGSMAVFHQTQGPSYSESKRLEFVAARLGAELRDASLRMFGLRV 87 (221)
T ss_dssp CCCCCCSSCCEEECCCCCCSSSCCCEEEEEECBSSSCSSCCCEEESSSEEECSCSSCEEESSCSSCCCCCCEEECCCSSC
T ss_pred cEEEEeCCCEEEEeeeccCCCCCccceEEEEEeCCCCceEEEEECCCCCCcCCCCcEEEecccCCCCCCCceEEEccCCh
Confidence 456789999999999853112222 358999986311 1 1000 000135555543 56899999999
Q ss_pred CCCCcceEEEeeecC
Q psy12724 138 EDGYKSYQCRTKHRL 152 (167)
Q Consensus 138 ~D~~G~Y~C~a~n~~ 152 (167)
+|+ |.|+|.+.|..
T Consensus 88 ~D~-G~Y~C~~~~~~ 101 (221)
T 3eow_R 88 EDE-GSYTCLFVTFP 101 (221)
T ss_dssp CCC-SCBEEEEEESS
T ss_pred HHC-eEEEEEEEeCC
Confidence 999 99999999854
No 472
>3bae_H WO2 IGG2A FAB fragment heavy chain; abeta, FAB, WO2, alzheimer'S disease, immunotherapies, APP, immune system; 1.59A {Mus musculus} SCOP: b.1.1.2 PDB: 3bkc_H 3bkj_H 3bkm_H 3mck_H 2r0w_H* 2iqa_H 2iq9_H 1ggi_H 1ggb_H 1ggc_H 3eys_H* 2ipt_H 2ipu_H 3eyu_H* 2r0z_H* 3rkd_H 1r0a_H* 1n5y_H* 1n6q_H* 1t03_H* ...
Probab=98.88 E-value=5.1e-09 Score=79.40 Aligned_cols=77 Identities=18% Similarity=0.273 Sum_probs=53.9
Q ss_pred ecCeEEEeCCcEEEEeeeCCccCCcc----eeEEEEeCC-Cee---eEEee-------eecCCceEEEcc-----CCeEE
Q psy12724 72 IMDEHVLKGNSAVLKCHIPSFVADYV----AVESWISDQ-GEE---LFVDM-------TESTDGKYLVLP-----SGELH 131 (167)
Q Consensus 72 ~~~~~v~~G~~a~l~C~~~~~~~~p~----p~i~W~k~~-~~~---l~~~~-------~~~~~~r~~~~~-----~g~L~ 131 (167)
+.+..+.+|++|.|+|.+.+. |. +.+.|+|++ +.. +.... .+...+|+.+.. ++.|.
T Consensus 7 p~~~~v~~G~~v~L~C~~~~~---~~~~~~~~v~W~r~~~g~~~~~l~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~~L~ 83 (228)
T 3bae_H 7 SGPGLLKPSQTLSLTCSFSGF---SIRTSKVGVSWIRQPSGKGLEWLAHIYWDDDKRYNPSLESRLTISKDTSRDMVFMK 83 (228)
T ss_dssp ECCSEECTTCCEEEEEEEESS---CHHHHCCEEEEEEEETTCCCEEEEEECTTSCEEECTTTGGGEEEEEETTTTEEEEE
T ss_pred CCceeecCCCeEEEEEEEeCc---ccCCCceeEEEEEECCCCCeEEEEEEecCCceeeCcccCCcEEEEEcCCCCeEEEE
Confidence 455688899999999999743 43 789998853 111 11100 001246787653 25899
Q ss_pred EeecCcCCCCcceEEEeeecC
Q psy12724 132 IRDVGPEDGYKSYQCRTKHRL 152 (167)
Q Consensus 132 I~~v~~~D~~G~Y~C~a~n~~ 152 (167)
|++++.+|+ |.|.|.+.|..
T Consensus 84 I~~v~~~D~-G~Y~C~~~~~~ 103 (228)
T 3bae_H 84 ITSVDTADT-ATYYCARRGFY 103 (228)
T ss_dssp ECSCCGGGC-EEEEEEEEEES
T ss_pred EcCCCcccC-EEEEEEEecCC
Confidence 999999999 99999999853
No 473
>3bj9_1 Immunoglobulin IOTA chain, immunoglobulin lambda- like polypeptide 1; immunoglobulin domain, beta sheet, polymorphism, immune system; 2.00A {Homo sapiens} PDB: 2h3n_A
Probab=98.88 E-value=1.4e-08 Score=69.48 Aligned_cols=87 Identities=18% Similarity=0.211 Sum_probs=56.2
Q ss_pred CeEEEeCCcEEEEeeeCCccCCcceeEEEEeCCC-e---eeEEee-------eecCCceEEEcc---CC--eEEEeecCc
Q psy12724 74 DEHVLKGNSAVLKCHIPSFVADYVAVESWISDQG-E---ELFVDM-------TESTDGKYLVLP---SG--ELHIRDVGP 137 (167)
Q Consensus 74 ~~~v~~G~~a~l~C~~~~~~~~p~p~i~W~k~~~-~---~l~~~~-------~~~~~~r~~~~~---~g--~L~I~~v~~ 137 (167)
...+.+|++|+|+|.+......+.+.+.|+|... . .+.... .+...+|+.+.. ++ .|.|++++.
T Consensus 7 ~~~~~~G~~v~L~C~~~~~~~~~~~~v~W~rq~~~~~~~~l~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~sL~I~~~~~ 86 (116)
T 3bj9_1 7 AMSSALGTTIRLTCTLRNDHDIGVYSVYWYQQRPGHPPRFLLRYFSQSDKSQGPQVPPRFSGSKDVARNRGYLSISELQP 86 (116)
T ss_dssp EEEEETTCCEEEEEEECSSSCGGGCCEEEEEECTTSCCEEEEEEEETTEEEECTTCCTTEEEEEEGGGTEEEEEECSCCG
T ss_pred cEEEcCCCcEEEEEEeecCccCCCceEEEEEeCCCCCcEEEEEEecCCCceeCccCCCcEEEEecCCCceEEEEECCCCh
Confidence 3577899999999998632111456789988531 1 121100 001235776653 24 799999999
Q ss_pred CCCCcceEEEeeecC----cceEEEeee
Q psy12724 138 EDGYKSYQCRTKHRL----TGETRLSAT 161 (167)
Q Consensus 138 ~D~~G~Y~C~a~n~~----~~~~~l~~~ 161 (167)
+|+ |.|.|.+.+.. ..-++|.+.
T Consensus 87 ~Ds-G~Y~C~~~~~~~~~fg~gT~L~V~ 113 (116)
T 3bj9_1 87 EDE-AMYYCAMGARSTHVFGSGTQLTVL 113 (116)
T ss_dssp GGC-EEEEEEECCSSCCEECCCEEEEEE
T ss_pred hHC-EEEEEEEeCCCCcEECCCEEEEEe
Confidence 999 99999998753 344555554
No 474
>1fo0_A Protein (BM3.3 T cell receptor alpha-chain); class I MHC, H-2KB, TCR-PMHC complex, immune system; 2.50A {Mus musculus} SCOP: b.1.1.1 PDB: 1nam_A*
Probab=98.88 E-value=7.5e-09 Score=71.10 Aligned_cols=74 Identities=18% Similarity=0.220 Sum_probs=50.2
Q ss_pred CeEEEeCCcEEEEeeeCCccCCcceeEEEEeCC-Ce-e--eEEee----eecCCceEEEc--c-C--CeEEEeecCcCCC
Q psy12724 74 DEHVLKGNSAVLKCHIPSFVADYVAVESWISDQ-GE-E--LFVDM----TESTDGKYLVL--P-S--GELHIRDVGPEDG 140 (167)
Q Consensus 74 ~~~v~~G~~a~l~C~~~~~~~~p~p~i~W~k~~-~~-~--l~~~~----~~~~~~r~~~~--~-~--g~L~I~~v~~~D~ 140 (167)
...+.+|++|+|+|.+.+.. +.+.+.|+|.. +. + +.... .+...+|+.+. . + ..|.|++++.+|+
T Consensus 9 ~~~~~~G~~vtL~C~~~~~~--~~~~v~W~rq~~~~~~~~l~~~~~~~~~~~~~~R~~~~~~~~~~~~~L~I~~~~~~Ds 86 (116)
T 1fo0_A 9 SISVMEKTTVTMDCVYETQD--SSYFLFWYKQTASGEIVFLIRQDSYKKENATVGHYSLNFQKPKSSIGLIITATQIEDS 86 (116)
T ss_dssp EEEEETTCCEEECCEECCCC--SSCEEEEEEECTTCCEEEEEEEETTCCSCCEETTEEEEEEGGGTEEEEEECSCCGGGC
T ss_pred cEEEecCCcEEEEeEecCCC--CCeEEEEEEeCCCCCeEEEEEEccCCcCcccCCcEEEEEeCCCCEEEEEECCCChhhC
Confidence 45788999999999997421 44578999853 11 1 11110 00113677763 2 2 2699999999999
Q ss_pred CcceEEEeee
Q psy12724 141 YKSYQCRTKH 150 (167)
Q Consensus 141 ~G~Y~C~a~n 150 (167)
|.|.|.+.+
T Consensus 87 -G~Y~C~~~~ 95 (116)
T 1fo0_A 87 -AVYFCAMRG 95 (116)
T ss_dssp -EEEEEEEEC
T ss_pred -EEEEEEEEc
Confidence 999999987
No 475
>2z35_A T-cell receptor alpha-chain; immune receptor, immune system; 2.20A {Mus musculus} PDB: 2pxy_A 2z31_A 1ac6_A
Probab=98.88 E-value=6.3e-09 Score=70.97 Aligned_cols=73 Identities=15% Similarity=0.178 Sum_probs=50.0
Q ss_pred cCeEEEeCCcEEEEeeeCCccCCcceeEEEEeCCC-e-e--eEEeee---ecCCceEEEcc-----CCeEEEeecCcCCC
Q psy12724 73 MDEHVLKGNSAVLKCHIPSFVADYVAVESWISDQG-E-E--LFVDMT---ESTDGKYLVLP-----SGELHIRDVGPEDG 140 (167)
Q Consensus 73 ~~~~v~~G~~a~l~C~~~~~~~~p~p~i~W~k~~~-~-~--l~~~~~---~~~~~r~~~~~-----~g~L~I~~v~~~D~ 140 (167)
....+.+|++|+|+|.+.+. +.+.+.|+|... . + +..... ....+|+.+.. +..|.|++++.+|+
T Consensus 8 ~~~~~~~G~~v~L~C~~~~~---~~~~v~W~rq~~~~~~~~l~~~~~~~~~~~~~r~~~~~~~~~~~~~L~I~~~~~~Ds 84 (112)
T 2z35_A 8 GQVALSEEDFLTIHCNYSAS---GYPALFWYVQYPGEGPQFLFRASRDKEKGSSRGFEATYNKEATSFHLQKASVQESDS 84 (112)
T ss_dssp SEEEEETTCCEEECCEEECS---SCCEEEEEEECTTSCCEEEEEECSTTCEEEETTEEEECBTTTTBCCEEESSCCSTTC
T ss_pred CcEEEcCCCCEEEEEEECCC---CCCeEEEEEECCCCCcEEeEEEecccCCccCCCEEEEEcCCCCEEEEEECCCChhhC
Confidence 34578899999999998642 556799998531 1 1 211100 00135777641 23699999999999
Q ss_pred CcceEEEee
Q psy12724 141 YKSYQCRTK 149 (167)
Q Consensus 141 ~G~Y~C~a~ 149 (167)
|.|.|.+.
T Consensus 85 -G~Y~C~~~ 92 (112)
T 2z35_A 85 -AVYYCALS 92 (112)
T ss_dssp -SEEEEEEE
T ss_pred -EEEEEEEE
Confidence 99999998
No 476
>1oaq_L Light chain; antibody, allergy, IGE, conformational diversity, multispecificity; 1.50A {Rattus rattus} SCOP: b.1.1.1 PDB: 1ocw_L 2bjm_L* 1oau_L* 1oar_L* 1oaz_L 1mfa_L* 1a6v_L* 1oax_L* 1oay_L* 1a6w_L* 1a6u_L 1dl7_L*
Probab=98.88 E-value=7.9e-09 Score=71.41 Aligned_cols=87 Identities=15% Similarity=0.206 Sum_probs=56.5
Q ss_pred eEEEeCCcEEEEeeeCCccCCcceeEEEEeCCC-e-e-eEEee----eecCCceEEEccC---CeEEEeecCcCCCCcce
Q psy12724 75 EHVLKGNSAVLKCHIPSFVADYVAVESWISDQG-E-E-LFVDM----TESTDGKYLVLPS---GELHIRDVGPEDGYKSY 144 (167)
Q Consensus 75 ~~v~~G~~a~l~C~~~~~~~~p~p~i~W~k~~~-~-~-l~~~~----~~~~~~r~~~~~~---g~L~I~~v~~~D~~G~Y 144 (167)
..+.+|++|+|+|.+.+......+.+.|+|... . + +.-.. .+...+|+.+..+ ..|.|++++.+|+ |.|
T Consensus 10 ~~~~~G~~v~L~C~~~~~~~~~~~~v~Wyrq~~~~~~~~l~~~~~~~~~~~~~R~~~~~~~~~~~L~I~~~~~~Ds-G~Y 88 (120)
T 1oaq_L 10 LTTSPGETVTLTCRSSTGAVTTSNYANWVQEKPDHLFTGLIGGTNNRAPGVPARFSGSLIGNKAALTITGAQTEDE-AIY 88 (120)
T ss_dssp EEECTTCEEEEEEEETTBCCCGGGCCEEEEEETTTEEEEEEETTTEECTTSCTTEEEEEETTEEEEEEESCCGGGC-EEE
T ss_pred EEEcCCCCEEEEEEeCCCccCCCCEEEEEEeCCCCCCeEEEEEcCccCCCCCCceEEecCCCeEEEEECCCChhhC-eEE
Confidence 567899999999999743100146789988531 1 1 11100 0012457765532 2699999999999 999
Q ss_pred EEEeeecC----cceEEEeeeC
Q psy12724 145 QCRTKHRL----TGETRLSATK 162 (167)
Q Consensus 145 ~C~a~n~~----~~~~~l~~~~ 162 (167)
.|.+.+.. ...++|++.+
T Consensus 89 ~C~~~~~~~~~fg~gt~L~V~~ 110 (120)
T 1oaq_L 89 FCALWYSNHLVFGGGTKLTVLG 110 (120)
T ss_dssp EEEEEETTEEEECCCEEEEECC
T ss_pred EEEEccCCCcEECCCEEEEEcC
Confidence 99998763 4456776654
No 477
>3omz_A Human vdelta1 gamma delta T cell receptor delta1A; immunoglobulin fold, immune surveillance of cell stress PROT A/B, MIC-A/B binding, epithelium; 3.04A {Homo sapiens}
Probab=98.88 E-value=6.6e-09 Score=80.05 Aligned_cols=77 Identities=13% Similarity=0.180 Sum_probs=46.9
Q ss_pred ecCeEEEeCCcEEEEeeeCCccCCcceeEEEEeC---CCeeeEEeee---------ecCCceEEEc-----cCCeEEEee
Q psy12724 72 IMDEHVLKGNSAVLKCHIPSFVADYVAVESWISD---QGEELFVDMT---------ESTDGKYLVL-----PSGELHIRD 134 (167)
Q Consensus 72 ~~~~~v~~G~~a~l~C~~~~~~~~p~p~i~W~k~---~~~~l~~~~~---------~~~~~r~~~~-----~~g~L~I~~ 134 (167)
+.+..+.+|++|+|+|.+.+ .|.+.+.|+|. +...+..... +.-.+|+... .+..|.|++
T Consensus 9 p~~~~v~~G~~v~L~C~~~~---~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~I~~ 85 (259)
T 3omz_A 9 TKSVIRQTGSSAEITCDLAE---GSTGYIHWYLHQEGKAPQRLLYYDSYTSSVVLESGISPGKYDTYGSTRKNLRMILRN 85 (259)
T ss_dssp --CEEEETTCCEEEECCC--------CEEEEEEECTTSCCEEEEEEETTTCCEEECTTCCBTTEEEECC--CCCEEEESS
T ss_pred CceeEecCCCcEEEEEEEcc---CCCcEEEEEEECCCCCcEEEEEEecCcCccccCCCCCcceeEeecCCCCeEEEEECC
Confidence 44578899999999999974 47889999982 2111111110 0001122221 234699999
Q ss_pred cCcCCCCcceEEEeeecC
Q psy12724 135 VGPEDGYKSYQCRTKHRL 152 (167)
Q Consensus 135 v~~~D~~G~Y~C~a~n~~ 152 (167)
++.+|+ |.|.|.+.|..
T Consensus 86 v~~~Ds-G~Y~C~~~~~~ 102 (259)
T 3omz_A 86 LIENDS-GVYYCATWDQN 102 (259)
T ss_dssp CCGGGC-EEEEEEEECTT
T ss_pred CCcccC-EEEEEEEeeCC
Confidence 999999 99999999863
No 478
>2gjj_A A21 single-chain antibody fragment against ERBB2; IG family, SCFV, immune system; 2.10A {Mus musculus} PDB: 3h3b_C
Probab=98.88 E-value=8.9e-09 Score=80.12 Aligned_cols=86 Identities=20% Similarity=0.292 Sum_probs=58.4
Q ss_pred ecCeEEEeCCcEEEEeeeCCccCCc------ceeEEEEeCC-Ceee--EEee----eecCCceEEEccC---CeEEEeec
Q psy12724 72 IMDEHVLKGNSAVLKCHIPSFVADY------VAVESWISDQ-GEEL--FVDM----TESTDGKYLVLPS---GELHIRDV 135 (167)
Q Consensus 72 ~~~~~v~~G~~a~l~C~~~~~~~~p------~p~i~W~k~~-~~~l--~~~~----~~~~~~r~~~~~~---g~L~I~~v 135 (167)
+.+..+.+|++|+|+|.+.+. | .+.+.|+|++ +..+ .-.. .+...+|+.+..+ +.|.|+++
T Consensus 12 p~~v~v~~G~~v~L~C~~~~~---~~~~~~~~~~v~W~k~~~g~~~~~l~~~~~~~~~~~~~R~~~~~~~~~~~L~I~~v 88 (264)
T 2gjj_A 12 PSSLPVSVGEKVTMTCKSSQT---LLYSNNQKNYLAWYQQKPGQSPKLLISWAFTRKSGVPDRFTGSGSGTDFTLTIGSV 88 (264)
T ss_dssp CSEEEEETTCCEEEEEEESSC---CEETTTTEECEEEEEECTTSCCEEEEETTTEECTTSCTTEEEEEETTEEEEEESSC
T ss_pred CCeEEecCCCcEEEEeEcCCc---ccccccCCceEEEEEECCCCCcEEEEEecccCCCCCCccEEEecCCCEEEEEECCC
Confidence 345678899999999999743 5 6889999853 1111 1000 0012467766532 37999999
Q ss_pred CcCCCCcceEEEeeecC----cceEEEeee
Q psy12724 136 GPEDGYKSYQCRTKHRL----TGETRLSAT 161 (167)
Q Consensus 136 ~~~D~~G~Y~C~a~n~~----~~~~~l~~~ 161 (167)
+.+|+ |.|.|.+.|.. +..+.|.+.
T Consensus 89 ~~~Ds-G~Y~C~~~~~~~~~~~~~~~L~V~ 117 (264)
T 2gjj_A 89 KAEDL-AVYYCQQYSNYPWTFGGGTRLEIK 117 (264)
T ss_dssp CGGGC-EEEEEEECSSSSCEECCCEEEEEE
T ss_pred CHHHC-EEEEEEEecCCccEecCCEEEEEE
Confidence 99999 99999999863 334556554
No 479
>1hxm_A Gamma-delta T-cell receptor; IG domain, TCR, GDTCR, immune system; 3.12A {Homo sapiens} SCOP: b.1.1.1 b.1.1.2
Probab=98.88 E-value=5.1e-08 Score=74.91 Aligned_cols=129 Identities=19% Similarity=0.253 Sum_probs=80.6
Q ss_pred eeeEEeEEEEEeCCcEEEEeecCCCCCCcceeeEEeeCC-Cc---eeeec--------CCc------------eE-----
Q psy12724 13 YEAQVYDVFVIKGNAAVFKCNLPSFVSDHLDVVSWADTD-GG---QYQID--------NQD------------FV----- 63 (167)
Q Consensus 13 ~~~~~~~~~v~~G~~~~l~C~a~~~~~~~~~~i~W~k~~-~~---~~~~~--------~~~------------~v----- 63 (167)
....+..+.+.+|+++.|.|.+.+.... -+.+.|+|.+ ++ .+..+ ..| .+
T Consensus 4 v~q~p~~v~v~~G~~vtL~C~~s~~~~~-~~~v~W~rq~~g~~~~~l~~~~~~~~~~~~~R~~~~~~~~~~~~sL~I~~v 82 (229)
T 1hxm_A 4 LVPEHQTVPVSIGVPATLRCSMKGEAIG-NYYINWYRKTQGNTMTFIYREKDIYGPGFKDNFQGDIDIAKNLAVLKILAP 82 (229)
T ss_dssp EEESCSEEEEETTCCEEEEEEECSSCGG-GSEEEEEEEESSSCSEEEEETTTEECTTTTTTEEEEEEGGGTEEEEEESSC
T ss_pred cEeCCCEEEEcCCCCEEEEeEecCCccC-cceEEEEEECCCCCcEEEEEcCCccCCCcCCeEEEEEcCCCCEEEEEECcC
Confidence 4556788999999999999999854321 2469998753 21 12110 011 11
Q ss_pred ---EEeeeEEEecCe------------------EEE-------------eCCcEEEEeeeCCccCCcce-eEEEEeCCCe
Q psy12724 64 ---VSQSYTVNIMDE------------------HVL-------------KGNSAVLKCHIPSFVADYVA-VESWISDQGE 108 (167)
Q Consensus 64 ---~~g~y~c~~~~~------------------~v~-------------~G~~a~l~C~~~~~~~~p~p-~i~W~k~~~~ 108 (167)
.+|.|.|.+.+. .|. .+..+.|.|.+.++ .|.+ .++|+++ .
T Consensus 83 ~~~Dsg~Y~C~~~~~~~~~~~~~~~~~g~gt~L~V~~~~~~~~~P~v~~~~~~~~L~C~~~g~--~P~~i~v~W~~~-~- 158 (229)
T 1hxm_A 83 SERDEGSYYCACDTLGMGGEYTDKLIFGKGTRVTVEPRSQPHTKPSVFVMKNGTNVACLVKEF--YPKDIRINLVSS-K- 158 (229)
T ss_dssp CGGGCEEEEEEEECCCCSSSCCCCCEEBCCEEEEEECCSCCCBCCEEEEEEETTEEEEEEESC--BSSCCEEEEECS-S-
T ss_pred CHhHCeEEEEEEecCCCcccccchhhcCccEEEEEeccCCCCcCCcEEEcCCCCeEEEEEEEE--eCCCEEEEEecC-C-
Confidence 169999986431 111 12235889999764 2544 7899998 4
Q ss_pred eeEEeeeecCCceEEEccCCeEEEeecCc-CCCCcceEEEeeecC
Q psy12724 109 ELFVDMTESTDGKYLVLPSGELHIRDVGP-EDGYKSYQCRTKHRL 152 (167)
Q Consensus 109 ~l~~~~~~~~~~r~~~~~~g~L~I~~v~~-~D~~G~Y~C~a~n~~ 152 (167)
.+.. .........+|.+.|..... +|. |.|+|.+.|..
T Consensus 159 ~~~~-----~~~~~~~~~dg~y~~~~~~~~~~~-~~ytC~V~h~~ 197 (229)
T 1hxm_A 159 KITE-----FDPAIVISPSGKYNAVKLGKYEDS-NSVTCSVQHDN 197 (229)
T ss_dssp EEEE-----CCCEEEECTTSSEEEEEEEEETTT-TTCEEEEEETT
T ss_pred EEec-----CccceEECCCCcEEEEECcccCCC-CcEEEEEEeCC
Confidence 4432 12223334567777765544 787 99999999986
No 480
>3u2s_H PG9 heavy chain; greek KEY, immunoglobulin, immune recognition, immune system; HET: PCA TYS BU3 NAG BMA MAN; 1.80A {Homo sapiens} PDB: 3u4e_H* 3u36_H 3mug_B* 3lrs_H* 3mme_H* 2qsc_H*
Probab=98.88 E-value=1.1e-08 Score=79.30 Aligned_cols=67 Identities=18% Similarity=0.332 Sum_probs=43.6
Q ss_pred eCCcEEEEeeeCCccCCc-ceeEEEEeCCCeeeE-Eee--eecCCceEEEccCCeEEEeecCcCCCCcceEEEeeecC
Q psy12724 79 KGNSAVLKCHIPSFVADY-VAVESWISDQGEELF-VDM--TESTDGKYLVLPSGELHIRDVGPEDGYKSYQCRTKHRL 152 (167)
Q Consensus 79 ~G~~a~l~C~~~~~~~~p-~p~i~W~k~~~~~l~-~~~--~~~~~~r~~~~~~g~L~I~~v~~~D~~G~Y~C~a~n~~ 152 (167)
.|+.+.|.|.+.+.. | .+.++|++++ ..+. ... ....++.|.+. ..|.|......| |.|+|.+.|..
T Consensus 155 ~g~~~~L~C~~~~~~--P~~~~v~W~~~g-~~~~~~~~~~~~~~~g~~~~~--s~L~i~~~~~~~--~~ytC~v~h~~ 225 (248)
T 3u2s_H 155 SGGTAALGCLVKDYF--PEPVTVSWNSGA-LTSGVHTFPAVLQSSGLYSLS--SVVTVPSSSLGT--QTYICNVNHKP 225 (248)
T ss_dssp --CEEEEEEEEEEEB--SSCCEEEEGGGT-BCTTEEECCCEECTTSCEEEE--EEEEEEGGGBTT--BCCEEEEEEGG
T ss_pred CCCcEEEEEEEeeEE--CCCeEEEEeECC-ccCceeecCceECCCCCEEEE--EEEEEChhhcCC--CeEEEEEEECC
Confidence 478999999997642 4 4578999987 3221 000 01234555543 368888887766 89999999986
No 481
>3m8o_H Immunoglobulin A1 heavy chain; immunoglobulin fold, immune system; 1.55A {Homo sapiens} PDB: 3qnx_B 3qny_B
Probab=98.88 E-value=1.1e-08 Score=76.80 Aligned_cols=88 Identities=18% Similarity=0.296 Sum_probs=58.1
Q ss_pred ecCeEEEeCCcEEEEeeeCCccCCcceeEEEEeCC-Ceee--EEeee-----------ecCCceEEEccCC-----eEEE
Q psy12724 72 IMDEHVLKGNSAVLKCHIPSFVADYVAVESWISDQ-GEEL--FVDMT-----------ESTDGKYLVLPSG-----ELHI 132 (167)
Q Consensus 72 ~~~~~v~~G~~a~l~C~~~~~~~~p~p~i~W~k~~-~~~l--~~~~~-----------~~~~~r~~~~~~g-----~L~I 132 (167)
+.+..+.+|++|.|+|.+.+. ..+.+.+.|+|.. +... .-... +...+|+.+..++ .|.|
T Consensus 7 p~~~~v~~G~~v~L~C~~~~~-~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~sL~I 85 (221)
T 3m8o_H 7 SGGGLVQPGGSLKLSCAASGF-TLSGSNVHWVRQASGKGLEWVGRIKRNAESDATAYAASMRGRLTISRDDSKNTAFLQM 85 (221)
T ss_dssp ESCEEECTTCCEEEEEEEESS-CGGGSEEEEEEECTTSCEEEEEEECCGGGTTCEEECGGGTTSEEEEEEGGGTEEEEEE
T ss_pred cCCEEEcCCCCEEEEEEcccc-cccccEEEEEEECCCCCcEEEEEEcccccCcccccCccccccEEEEecCCCCEEEEEE
Confidence 345678899999999999743 1236789999743 1111 10000 0123678776443 5999
Q ss_pred eecCcCCCCcceEEEeeecC-----cceEEEeee
Q psy12724 133 RDVGPEDGYKSYQCRTKHRL-----TGETRLSAT 161 (167)
Q Consensus 133 ~~v~~~D~~G~Y~C~a~n~~-----~~~~~l~~~ 161 (167)
++++.+|+ |.|.|.+.|.. ...+.|.+.
T Consensus 86 ~~v~~~Ds-G~Y~C~~~~~~~~~~~~~~~~l~V~ 118 (221)
T 3m8o_H 86 NSLKSDDT-AMYYCVIRGDVYNRQWGQGTLVTVS 118 (221)
T ss_dssp CSCCGGGC-EEEEEEEESCTTCCCBBCCEEEEEC
T ss_pred CCCCHHHC-EEEEEEEECCChhheECCCEEEEEe
Confidence 99999999 99999998852 344566553
No 482
>1ypz_E T cell receptor delta, beta-2-microglobulin; H2-T22 protein, T cell receptor delta, immune system; HET: NAG MAN FUC; 3.40A {Mus musculus} SCOP: b.1.1.1 b.1.1.2
Probab=98.87 E-value=6.6e-09 Score=78.23 Aligned_cols=74 Identities=19% Similarity=0.367 Sum_probs=51.8
Q ss_pred cCeEEEeCCcEEEEeeeCCccCCcceeEEEEeCC-Ce-e-eEEee--eecCCceEEEccC------CeEEEeecCcCCCC
Q psy12724 73 MDEHVLKGNSAVLKCHIPSFVADYVAVESWISDQ-GE-E-LFVDM--TESTDGKYLVLPS------GELHIRDVGPEDGY 141 (167)
Q Consensus 73 ~~~~v~~G~~a~l~C~~~~~~~~p~p~i~W~k~~-~~-~-l~~~~--~~~~~~r~~~~~~------g~L~I~~v~~~D~~ 141 (167)
.+..+.+|++|.|+|.+.+. + +.+.|+|.+ +. . +.-.. .+...+|+.+..+ ..|.|++++.+|+
T Consensus 9 ~~v~v~~G~~v~L~C~~~~~---~-~~v~W~r~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~~~L~I~~v~~~D~- 83 (207)
T 1ypz_E 9 SALSLHEGTDSALRCNFTTT---M-RSVQWFRQNSRGSLISLFYLASGTKENGRLKSAFDSKERRYSTLHIRDAQLEDS- 83 (207)
T ss_dssp SEEEEETTCCEEEEEEESSC---C-SEEEEEEECTTSCCEEEEEESSEEEEETTEEEEECTTTCSEEEEEECSCCGGGC-
T ss_pred CeEEEccCCcEEEEEEEeCC---C-eEEEEEEeCCCCCeEEEEEEccCCccCCCEEEEeccCCCCEEEEEECCCCHHHC-
Confidence 34678899999999999742 2 479999853 11 1 11000 0012467877643 3799999999999
Q ss_pred cceEEEeeec
Q psy12724 142 KSYQCRTKHR 151 (167)
Q Consensus 142 G~Y~C~a~n~ 151 (167)
|.|.|.+.|.
T Consensus 84 G~Y~C~~~~~ 93 (207)
T 1ypz_E 84 GTYFCAADTW 93 (207)
T ss_dssp EEEEEEEECB
T ss_pred EEEEEEEecC
Confidence 9999999886
No 483
>1nko_A Sialic acid binding IG-like lectin 7; immunoglobulin, siglec7, immune system; 1.45A {Homo sapiens} SCOP: b.1.1.1 PDB: 2g5r_A* 1o7v_A* 2df3_A* 1o7s_A* 2hrl_A*
Probab=98.87 E-value=1e-08 Score=71.71 Aligned_cols=90 Identities=18% Similarity=0.241 Sum_probs=57.9
Q ss_pred ecCeEEEeCCcEEEEeeeCCcc----CCcceeEEEEeCCCe-----eeEEee-----eecCCceEEEccC-----CeEEE
Q psy12724 72 IMDEHVLKGNSAVLKCHIPSFV----ADYVAVESWISDQGE-----ELFVDM-----TESTDGKYLVLPS-----GELHI 132 (167)
Q Consensus 72 ~~~~~v~~G~~a~l~C~~~~~~----~~p~p~i~W~k~~~~-----~l~~~~-----~~~~~~r~~~~~~-----g~L~I 132 (167)
+.+..+.+|++|.|+|...... ..+.+.+.|+|.... .+.... .+...+|+.+..+ -.|.|
T Consensus 13 p~~v~~~~G~~v~L~C~~~~~~~~~~~~~~~~v~W~~~~~~~~~~~~i~~~~~~~~~~~~~~~R~~~~~~~~~~~~sL~I 92 (132)
T 1nko_A 13 QSSVTVQEGMCVHVRCSFSYPVDSDTDSDPVHGYWFRAGNDISWKAPVATNNPAWAVQEETRDRFHLLGDPQTKNCTLSI 92 (132)
T ss_dssp CSEEEEETTCCEEECEEEECCCCTTTTTSCCEEEEEEC-----CCSCSEESCTTCCCCGGGTTTEEECSCGGGTBCCEEE
T ss_pred CCEEEEcCCCeEEEEccccCCCccccCCCccEEEEEECCCCCCcccEEEeCCCccccccccCccEEEeCCCCCCceEEEE
Confidence 3456788999999999985210 124567999997521 122110 0012468887643 27999
Q ss_pred eecCcCCCCcceEEEeeecC------cceEEEeeeC
Q psy12724 133 RDVGPEDGYKSYQCRTKHRL------TGETRLSATK 162 (167)
Q Consensus 133 ~~v~~~D~~G~Y~C~a~n~~------~~~~~l~~~~ 162 (167)
++++.+|+ |.|.|.+.+.. ...+.|++++
T Consensus 93 ~~v~~~Ds-G~Y~C~v~~~~~~~~~~~~~~~l~V~~ 127 (132)
T 1nko_A 93 RDARMSDA-GRYFFRMEKGNIKWNYKYDQLSVNVTA 127 (132)
T ss_dssp CSCCGGGC-EEEEEEEEETTEEEECTTSCEEEEEEC
T ss_pred cccCcccC-eeEEEEEEcCCCcccccCCceEEEecc
Confidence 99999999 99999998752 3355666543
No 484
>1dee_B IGM RF 2A2; FAB-IBP complex 2.7A resolution binding outside the antigen combining site superantigen FAB VH3 specificity; 2.70A {Homo sapiens} SCOP: b.1.1.1 b.1.1.2 PDB: 1hez_B 1adq_H
Probab=98.87 E-value=6.6e-09 Score=78.63 Aligned_cols=78 Identities=19% Similarity=0.282 Sum_probs=53.3
Q ss_pred ecCeEEEeCCcEEEEeeeCCccCCcceeEEEEeCC-Cee---eEEee--------eecCCceEEEccC-----CeEEEee
Q psy12724 72 IMDEHVLKGNSAVLKCHIPSFVADYVAVESWISDQ-GEE---LFVDM--------TESTDGKYLVLPS-----GELHIRD 134 (167)
Q Consensus 72 ~~~~~v~~G~~a~l~C~~~~~~~~p~p~i~W~k~~-~~~---l~~~~--------~~~~~~r~~~~~~-----g~L~I~~ 134 (167)
+.+..+.+|++|.|+|.+.+.. ...+.+.|+|++ +.. +.... .+...+|+.+..+ ..|.|++
T Consensus 7 p~~~~v~~G~~v~L~C~~~~~~-~~~~~v~W~r~~~g~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~sL~I~~ 85 (223)
T 1dee_B 7 SGGGVVQPGKSLRLSCAASGFT-FSGYGMHWVRQAPGKGLEWVALISYDESNKYYADSVKGRFTISRDNSKNTLYLQMNS 85 (223)
T ss_dssp ECCCEECTTCCEEEEEEEESSC-GGGSCEEEEEECTTSCEEEEEEECTTSCCEEECTTTBTTEEEEEETTTTEEEEEECS
T ss_pred CCCEEEcCCCcEEEEEEecCcc-cCCceEEEEEECCCCCcEEEEEEecCCCccccCcccCCeEEEEecCCCCEEEEEECC
Confidence 3456788999999999997431 124789999853 111 11100 0012467877642 3799999
Q ss_pred cCcCCCCcceEEEeeec
Q psy12724 135 VGPEDGYKSYQCRTKHR 151 (167)
Q Consensus 135 v~~~D~~G~Y~C~a~n~ 151 (167)
++.+|+ |.|.|.+.|.
T Consensus 86 v~~~D~-G~Y~C~~~~~ 101 (223)
T 1dee_B 86 LRAEDT-AVYYCAKVKF 101 (223)
T ss_dssp CCGGGC-EEEEEEEESS
T ss_pred CCHHHC-EEEEEEEecc
Confidence 999999 9999999985
No 485
>1hxm_B Gamma-delta T-cell receptor; IG domain, TCR, GDTCR, immune system; 3.12A {Homo sapiens} SCOP: b.1.1.1 b.1.1.2
Probab=98.87 E-value=9.1e-09 Score=78.78 Aligned_cols=77 Identities=21% Similarity=0.330 Sum_probs=53.4
Q ss_pred cCeEEEeCCcEEEEeeeCCccCCcceeEEEEeCC-Cee---eEEee-------eec-CCceEEEcc-----CCeEEEeec
Q psy12724 73 MDEHVLKGNSAVLKCHIPSFVADYVAVESWISDQ-GEE---LFVDM-------TES-TDGKYLVLP-----SGELHIRDV 135 (167)
Q Consensus 73 ~~~~v~~G~~a~l~C~~~~~~~~p~p~i~W~k~~-~~~---l~~~~-------~~~-~~~r~~~~~-----~g~L~I~~v 135 (167)
.+..+.+|++|.|+|.+.+. ..+.+.+.|+|++ +.. +.... .+. ..+|+.+.. +..|.|+++
T Consensus 9 ~~v~~~~G~~v~L~C~~~~~-~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~~L~I~~v 87 (242)
T 1hxm_B 9 ISSTKTLSKTARLECVVSGI-TISATSVYWYRERPGEVIQFLVSISYDGTVRKESGIPSGKFEVDRIPETSTSTLTIHNV 87 (242)
T ss_dssp SEEEEETTCCEEEEEEEESS-CTTTSCEEEEEECTTSCCEEEEEECSSSCEEECTTCCTTSEEEEEETTTTEEEEEECSC
T ss_pred ceEEecCCCcEEEEEEeCCc-cccCceEEEEEeCCCCCcEEEEEEecCCceecCCcccCCeEEEEecCCCcEEEEEECCC
Confidence 45678899999999998642 1256789999853 111 11100 000 256787653 347999999
Q ss_pred CcCCCCcceEEEeeec
Q psy12724 136 GPEDGYKSYQCRTKHR 151 (167)
Q Consensus 136 ~~~D~~G~Y~C~a~n~ 151 (167)
+.+|+ |.|.|.+.|.
T Consensus 88 ~~~D~-G~Y~C~~~~~ 102 (242)
T 1hxm_B 88 EKQDI-ATYYCALWEA 102 (242)
T ss_dssp CGGGC-EEEEEEEEEE
T ss_pred CcccC-EEEEEeeecC
Confidence 99999 9999999986
No 486
>1bec_A 14.3.D T cell antigen receptor; T cell receptor; 1.70A {Mus musculus} SCOP: b.1.1.1 b.1.1.2 PDB: 1jck_A 1l0x_A 1sbb_A 1l0y_A 3c6l_B 1mwa_B* 1g6r_B* 1tcr_B* 2ckb_B 2q86_B* 1lp9_F 2j8u_F 2jcc_F 2uwe_F 3mbe_D* 1d9k_B* 2aq3_A 3mc0_A 3byt_A 3bzd_A ...
Probab=98.87 E-value=9.6e-09 Score=78.35 Aligned_cols=75 Identities=13% Similarity=0.232 Sum_probs=52.7
Q ss_pred ecCeEEEeCCcEEEEeeeCCccCCcceeEEEEeCC-Cee---eEEee------eecCCceEEEcc----CCeEEEeecCc
Q psy12724 72 IMDEHVLKGNSAVLKCHIPSFVADYVAVESWISDQ-GEE---LFVDM------TESTDGKYLVLP----SGELHIRDVGP 137 (167)
Q Consensus 72 ~~~~~v~~G~~a~l~C~~~~~~~~p~p~i~W~k~~-~~~---l~~~~------~~~~~~r~~~~~----~g~L~I~~v~~ 137 (167)
+.+..+.+|++|.|+|.+.. +.+.+.|+|++ +.. +.... .....+|+.+.. +..|.|++++.
T Consensus 6 p~~v~v~~G~~v~L~C~~~~----~~~~v~W~r~~~~~~~~~l~~~~~~~~~~~~~~~~R~~~~~~~~~~~~L~I~~v~~ 81 (238)
T 1bec_A 6 PRNKVAVTGGKVTLSCQQTN----NHNNMYWYRQDTGHGLRLIHYSYGAGSTEKGDIPDGYKASRPSQEQFSLILELATP 81 (238)
T ss_dssp CSEEEEETTCCEEEEEEESS----CCSEEEEEEECTTSCEEEEEEEEETTEEEECSCCTTCEEECCSSSEEEEEESSCCG
T ss_pred CCeeEEeCCCcEEEEEEeCC----CCceEEEEEECCCCCEEEEEEEeCCCcccCCCccceEEEEecCCCEEEEEEecCCc
Confidence 34567899999999999842 56789999864 111 11000 001246776653 23799999999
Q ss_pred CCCCcceEEEeeec
Q psy12724 138 EDGYKSYQCRTKHR 151 (167)
Q Consensus 138 ~D~~G~Y~C~a~n~ 151 (167)
+|+ |.|.|.+.|.
T Consensus 82 ~D~-G~Y~C~~~~~ 94 (238)
T 1bec_A 82 SQT-SVYFCASGGG 94 (238)
T ss_dssp GGC-EEEEEEEESC
T ss_pred ccC-EEEEEEEecC
Confidence 999 9999999986
No 487
>3rrq_A Protein PD-1, programmed cell death protein 1; programmed death-1, costimulatory, immune system; 2.10A {Homo sapiens}
Probab=98.86 E-value=4.3e-08 Score=68.79 Aligned_cols=89 Identities=16% Similarity=0.193 Sum_probs=58.6
Q ss_pred ecCeEEEeCCcEEEEeeeCCccCCcceeEEEEeCC--Cee--eEEee----eecCCceEEEcc--C---CeEEEeecCcC
Q psy12724 72 IMDEHVLKGNSAVLKCHIPSFVADYVAVESWISDQ--GEE--LFVDM----TESTDGKYLVLP--S---GELHIRDVGPE 138 (167)
Q Consensus 72 ~~~~~v~~G~~a~l~C~~~~~~~~p~p~i~W~k~~--~~~--l~~~~----~~~~~~r~~~~~--~---g~L~I~~v~~~ 138 (167)
+....+.+|++|.|.|.+.+. .....+.|+|.. ... +.... .+...+||.+.. + ..|.|++++.+
T Consensus 8 P~~~~v~~G~~vtL~C~~s~~--~~~~~v~Wyrq~~g~~~~~l~~~~~~~~~~~~~~Rf~~~~~~~~~~~sL~I~~~~~~ 85 (129)
T 3rrq_A 8 PALLVVTEGDNATFTCSFSNT--SESFVLNWYRMSPSNQTDKLAAFPEDRSQPGQDCRFRVTQLPNGRDFHMSVVRARRN 85 (129)
T ss_dssp CSEEEEETTSCEEEEEECCCC--C-CEEEEEEEEESTTSCEEEEEETC--------CCEEEEECTTSSEEEEEESSCCGG
T ss_pred CCEEEEeCCCCEEEEeEecCC--CCCcEEEEeEeCCCCCccEEEEEcCCccCCCcCCcEEEEEcCCCCEEEEEECCCChh
Confidence 345678899999999999743 124678998742 111 21110 001235887752 2 26999999999
Q ss_pred CCCcceEEEeeecC-------cceEEEeeeCC
Q psy12724 139 DGYKSYQCRTKHRL-------TGETRLSATKG 163 (167)
Q Consensus 139 D~~G~Y~C~a~n~~-------~~~~~l~~~~~ 163 (167)
|+ |.|.|.+.|.. +..++|+++..
T Consensus 86 Ds-g~Y~C~~~~~~~~~~~~~s~~~~L~V~~~ 116 (129)
T 3rrq_A 86 DS-GTYLCGAISLAPKLQIKESLRAELRVTER 116 (129)
T ss_dssp GC-EEEEEEEEECGGGCEEEECCCEEEEEECC
T ss_pred HC-EEEEEEEEecCCCceeeEeceEEEEEecC
Confidence 99 99999999864 34578887654
No 488
>2ifg_A High affinity nerve growth factor receptor; TRK, TRKA, receptor-ligand complex transferase; HET: NAG NDG MAN BMA; 3.40A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 c.10.2.7
Probab=98.86 E-value=7.8e-10 Score=89.11 Aligned_cols=70 Identities=20% Similarity=0.300 Sum_probs=54.6
Q ss_pred cCeEEEeCCcEEEEeeeCCccCCcceeEEEEeCCCeeeEEeeeecCCceEEEccCCeEEEeecCcCCCCc-ceEEEeeec
Q psy12724 73 MDEHVLKGNSAVLKCHIPSFVADYVAVESWISDQGEELFVDMTESTDGKYLVLPSGELHIRDVGPEDGYK-SYQCRTKHR 151 (167)
Q Consensus 73 ~~~~v~~G~~a~l~C~~~~~~~~p~p~i~W~k~~~~~l~~~~~~~~~~r~~~~~~g~L~I~~v~~~D~~G-~Y~C~a~n~ 151 (167)
.+..+.+|+++.|.|.+. +.|.|.++|++++. .+... ..+.....++.|.|.+++.+|+ | .|+|.|.|.
T Consensus 166 ~~~~v~~G~~v~L~C~~~---g~p~p~i~W~~~~~-~~~~~-----~~~~~~~~~~~L~i~~v~~~D~-G~~Y~C~a~n~ 235 (347)
T 2ifg_A 166 PNASVDVGDDVLLRCQVE---GRGLEQAGWILTEL-EQSAT-----VMKSGGLPSLGLTLANVTSDLN-RKNVTCWAEND 235 (347)
T ss_dssp CSSCCBTTCCEEEEEEEE---CSSCCCCCEEESCC-CSSEE-----ECCCCCSSEEEEEEESCCSTTT-TCCEEECCEET
T ss_pred CceEEeCCCcEEEEEEEe---cCCCCEEEEEcCCc-eeecc-----cccceecccceEEEeeCChHHC-CCeEEEEEEcC
Confidence 455678999999999997 45889999999984 33221 1222334567899999999999 9 999999998
Q ss_pred C
Q psy12724 152 L 152 (167)
Q Consensus 152 ~ 152 (167)
.
T Consensus 236 ~ 236 (347)
T 2ifg_A 236 V 236 (347)
T ss_dssp T
T ss_pred C
Confidence 6
No 489
>2xqy_G A13-D6.3 monoclonal antibody, envelope glycoprotein H; immune system-viral protein complex, envelope protein; HET: NAG; 2.05A {Mus musculus}
Probab=98.86 E-value=7.5e-09 Score=80.82 Aligned_cols=85 Identities=18% Similarity=0.306 Sum_probs=57.8
Q ss_pred cCeEEEeCCcEEEEeeeCCccCCc--ceeEEEEeCC-Ceee--EEee---------eecCCceEEEcc-----CCeEEEe
Q psy12724 73 MDEHVLKGNSAVLKCHIPSFVADY--VAVESWISDQ-GEEL--FVDM---------TESTDGKYLVLP-----SGELHIR 133 (167)
Q Consensus 73 ~~~~v~~G~~a~l~C~~~~~~~~p--~p~i~W~k~~-~~~l--~~~~---------~~~~~~r~~~~~-----~g~L~I~ 133 (167)
.+..+.+|++|+|+|.+.+. | .+.+.|+|++ +..+ .-.+ .+...+|+.+.. +..|.|+
T Consensus 14 ~~~~v~~G~~v~L~C~~~~~---~~~~~~v~W~r~~~g~~~~~l~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~sL~I~ 90 (261)
T 2xqy_G 14 GAELVKPGASVKMSCKASGY---SFTSYWMNWVKQRPGRGLEWIGRIDPSDNETHYNQDFKDKVTLTVDKSSSTVYIQLS 90 (261)
T ss_dssp SEEEECTTCCEEEEEEEESS---CGGGSCEEEEEECTTSCEEEEEEECTTTCCEEECGGGTTTEEEEEEGGGTEEEEEEC
T ss_pred CCEEEcCCCCEEEEEEeCCc---ccCCceEEEEEeCCCCCcEEEEEEecCCCceeeCCccCCcEEEEecCCCCEEEEEEc
Confidence 44578899999999999743 3 5789999864 1221 1000 001246787654 2479999
Q ss_pred ecCcCCCCcceEEEeeecC------cceEEEeee
Q psy12724 134 DVGPEDGYKSYQCRTKHRL------TGETRLSAT 161 (167)
Q Consensus 134 ~v~~~D~~G~Y~C~a~n~~------~~~~~l~~~ 161 (167)
+++.+|+ |.|.|.+.|.. ...+.|.+.
T Consensus 91 ~v~~~Ds-G~Y~C~~~~~~~~~~~~~~~~~L~V~ 123 (261)
T 2xqy_G 91 SLTSEDS-AVYYCGRLGYVYGFDYWGQGTTLTVS 123 (261)
T ss_dssp SCCGGGC-EEEEEEEECTTSSEEEECCCEEEEEC
T ss_pred CCCcccC-eEEEEEEecCCCcceEECCCEEEEEc
Confidence 9999999 99999999842 234566654
No 490
>2yc1_B Single chain antibody fragment 9004G; immune system-toxin complex, scorpion toxin; 1.90A {Homo sapiens} PDB: 2ybr_B 3lh2_L 3h3p_L 3lhp_L
Probab=98.85 E-value=9e-09 Score=74.36 Aligned_cols=85 Identities=21% Similarity=0.287 Sum_probs=56.9
Q ss_pred cCeEEEeCCcEEEEeeeCCccCCcceeEEEEeCCC-e---eeEEe---eeecCCceEEEccC---CeEEEeecCcCCCCc
Q psy12724 73 MDEHVLKGNSAVLKCHIPSFVADYVAVESWISDQG-E---ELFVD---MTESTDGKYLVLPS---GELHIRDVGPEDGYK 142 (167)
Q Consensus 73 ~~~~v~~G~~a~l~C~~~~~~~~p~p~i~W~k~~~-~---~l~~~---~~~~~~~r~~~~~~---g~L~I~~v~~~D~~G 142 (167)
.+..+.+|++|+|+|.+.+. +.+.+.|+|... . .+... ..+...+||.+..+ ..|.|++++.+|+ |
T Consensus 24 ~~v~v~~G~sVtL~C~~s~~---~~~~v~Wyrq~~g~~~~~li~~~~~~~~~~~~Rfs~~~~~~~~sL~I~~v~~~Ds-G 99 (146)
T 2yc1_B 24 ATLSVSPGERATLSCRASQS---VRSYLAWYQQKPGQAPRLLFSDASNRATGIPARFTGSGSGTDFTLTISSLEPEDF-A 99 (146)
T ss_dssp SEEEECTTSCEEEEEEESSC---CTTCEEEEEECTTSCCEEEEETTTEECTTCCTTEEEEEETTEEEEEESSCCGGGC-S
T ss_pred CEEEEecCCCEEEEEEECCC---CCCEEEEEEECCCCCCEEEEEeCCccCCCcCCCeEEecCCCEEEEEECCCCHHHC-E
Confidence 34578899999999999743 456789998541 1 12110 00012457766432 2699999999999 9
Q ss_pred ceEEEeeecC----cceEEEeee
Q psy12724 143 SYQCRTKHRL----TGETRLSAT 161 (167)
Q Consensus 143 ~Y~C~a~n~~----~~~~~l~~~ 161 (167)
.|.|.+.|.. ..-++|++.
T Consensus 100 ~Y~C~~~~~~~~~fg~GT~L~V~ 122 (146)
T 2yc1_B 100 IYYCQQYRYSPRTFGQGTKVEIK 122 (146)
T ss_dssp EEEEEECSSSSCEECCCEEEEEC
T ss_pred EEEEEEecCCCCeECCCEEEEEe
Confidence 9999998753 344566654
No 491
>3pv7_A B7-H6, IG-like domain-containing protein DKFZP686O24166/DKFZP686I21167; NK cell receptor, receptor-ligand complex, immune system; HET: NAG; 2.00A {Homo sapiens} PDB: 3pv6_A*
Probab=98.85 E-value=1.1e-08 Score=78.07 Aligned_cols=71 Identities=11% Similarity=0.149 Sum_probs=48.3
Q ss_pred CeEEEeCCcEEEEeeeCCccCCccee-----EEEEeCCCee-----eEEeeeecCCceEEEc-------------cCCeE
Q psy12724 74 DEHVLKGNSAVLKCHIPSFVADYVAV-----ESWISDQGEE-----LFVDMTESTDGKYLVL-------------PSGEL 130 (167)
Q Consensus 74 ~~~v~~G~~a~l~C~~~~~~~~p~p~-----i~W~k~~~~~-----l~~~~~~~~~~r~~~~-------------~~g~L 130 (167)
+..+.+|+++.|+|.+.+ .|.+. ++|+|++... +... .+++.... .+..|
T Consensus 12 ~~~v~~G~~v~L~C~~~g---~p~~~~~~~~v~W~k~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~sL 84 (248)
T 3pv7_A 12 TQITPLNDNVTIFCNIFY---SQPLNITSMGITWFWKSLTFDKEVKVFEF----FGDHQEAFRPGAIVSPWRLKSGDASL 84 (248)
T ss_dssp EEEEETTSCEEECCEEEE---SSCCCTTSCEEEEEEECSSCCCEEEEEEE----ESSCEEESSTTCBCCHHHHTTTBCCE
T ss_pred CeEEeCCCCEEEeeEEec---CCCcCCCceEEEEEEEcCCCCcceEEEEe----cCCcccccCCceEEEeccCCCCcEEE
Confidence 457889999999999963 35554 9999974211 1110 01111111 12359
Q ss_pred EEeecCcCCCCcceEEEeeecC
Q psy12724 131 HIRDVGPEDGYKSYQCRTKHRL 152 (167)
Q Consensus 131 ~I~~v~~~D~~G~Y~C~a~n~~ 152 (167)
.|.+++.+|+ |.|+|.+.|..
T Consensus 85 ~I~~v~~~D~-G~Y~C~~~~~~ 105 (248)
T 3pv7_A 85 RLPGIQLEEA-GEYRCEVVVTP 105 (248)
T ss_dssp EESSCCGGGC-EEEEEEEEETT
T ss_pred EeCCCCHHHC-eEEEEEEEeCC
Confidence 9999999999 99999999876
No 492
>3moq_A NEW antigen receptor variable domain, P3(40) PEPT amyloid beta A4 protein; AB-ignar, AB-12Y-2, glycoprotein, membran protease inhibitor; 2.05A {Orectolobus maculatus} PDB: 2z8w_C 2z8v_C 1ves_A 1ver_A
Probab=98.85 E-value=8.9e-09 Score=72.56 Aligned_cols=76 Identities=21% Similarity=0.333 Sum_probs=52.3
Q ss_pred cCeEEEeCCcEEEEeeeCCccCCcceeEEEEeCC-CeeeEEeeeecCCceEEEcc-----CCeEEEeecCcCCCCcceEE
Q psy12724 73 MDEHVLKGNSAVLKCHIPSFVADYVAVESWISDQ-GEELFVDMTESTDGKYLVLP-----SGELHIRDVGPEDGYKSYQC 146 (167)
Q Consensus 73 ~~~~v~~G~~a~l~C~~~~~~~~p~p~i~W~k~~-~~~l~~~~~~~~~~r~~~~~-----~g~L~I~~v~~~D~~G~Y~C 146 (167)
.+..+.+|++++|+|.+.+. ..+.+.+.|+|.. +....... ...+||.+.. +..|.|++++.+|+ |.|.|
T Consensus 8 ~~v~v~~G~svtL~C~~s~~-~~~~~~v~Wyrq~~g~~~~~li--~~~~R~~~~~~~~~~~~sL~I~~v~~~Ds-G~Y~C 83 (126)
T 3moq_A 8 RTATKETGESLTINCVLRDA-SFELKDTGWYRTKLGSTNEQSI--SIGGRYVETVNKGSKSFSLRISDLRVEDS-GTYKC 83 (126)
T ss_dssp SEEEEETTCCEEEEEEEESC-SSCCCEEEEEEEETTCCCCEEC--CCBTTEEEEEETTTTEEEEEECSCCGGGC-EEEEE
T ss_pred ceEEEeCCCCEEEEEEeecC-ccCCceEEEEEeCCCCCceEEE--EeCCcEEEEEeCCCCEEEEEECcCChHhC-EEEEE
Confidence 44678899999999998642 1145678999842 11110001 1356776532 23699999999999 99999
Q ss_pred EeeecC
Q psy12724 147 RTKHRL 152 (167)
Q Consensus 147 ~a~n~~ 152 (167)
.+.|..
T Consensus 84 ~~~~~~ 89 (126)
T 3moq_A 84 QAFYVF 89 (126)
T ss_dssp EEEEEE
T ss_pred EEEEcC
Confidence 999865
No 493
>3b5h_A Cervical EMMPRIN, HAB18G/CD147; IG-like domain, cell invasion; 2.80A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4
Probab=98.84 E-value=1.1e-08 Score=74.32 Aligned_cols=71 Identities=14% Similarity=0.190 Sum_probs=51.3
Q ss_pred eEEEeCCcEEEEeeeCCccCCcce--eEEEEeCCCeeeEEeeeecCCceEEEccCCeEEEeecCcCCCCcceEEEeeecC
Q psy12724 75 EHVLKGNSAVLKCHIPSFVADYVA--VESWISDQGEELFVDMTESTDGKYLVLPSGELHIRDVGPEDGYKSYQCRTKHRL 152 (167)
Q Consensus 75 ~~v~~G~~a~l~C~~~~~~~~p~p--~i~W~k~~~~~l~~~~~~~~~~r~~~~~~g~L~I~~v~~~D~~G~Y~C~a~n~~ 152 (167)
..+.+|+++.|.|.+.+. |.| .++|+|++ ..+.. ..+. ..+..|.|. +.+|+ |.|+|.|.|..
T Consensus 8 ~~v~~G~~v~l~C~~~~~---~~p~~~~~W~k~~-~~l~~------~~~~--~~~~~l~i~--~~~d~-G~Y~C~~~n~~ 72 (184)
T 3b5h_A 8 TVEDLGSKILLTCSLNDS---ATEVTGHRWLKGG-VVLKE------DALP--GQKTEFKVD--SDDQW-GEYSCVFLPEP 72 (184)
T ss_dssp EEEEETTEEEEEEEEESC---SSCCCEEEEESSS-EEEEC------TTCC--CSEEEEEEC--GGGCC-EEEEEEEESTT
T ss_pred EEEecCCCEEEEEECCCC---CCCceEEEEEeCC-EEeec------cccc--CCcEEEEEe--chhhC-eEEEEEEECCc
Confidence 567899999999998754 555 89999987 55532 1111 113356676 69999 99999999976
Q ss_pred cceEEEee
Q psy12724 153 TGETRLSA 160 (167)
Q Consensus 153 ~~~~~l~~ 160 (167)
...+.|.+
T Consensus 73 ~~~~~l~V 80 (184)
T 3b5h_A 73 MGTANIQL 80 (184)
T ss_dssp SCEEEEEE
T ss_pred CcEEEEEE
Confidence 66666655
No 494
>3kg5_A B-cell antigen receptor complex-associated protei chain; CD79B, IG-beta, BCR, immunoglobulin domain, protein binding; 3.20A {Homo sapiens}
Probab=98.83 E-value=1.9e-08 Score=71.60 Aligned_cols=83 Identities=19% Similarity=0.189 Sum_probs=57.2
Q ss_pred cCeEEEeCCcEEEEeeeCCccCCcceeEEEEeC-C-CeeeEEeeeecCCceEEEccCC---eEEEeecCcCCCCcceEEE
Q psy12724 73 MDEHVLKGNSAVLKCHIPSFVADYVAVESWISD-Q-GEELFVDMTESTDGKYLVLPSG---ELHIRDVGPEDGYKSYQCR 147 (167)
Q Consensus 73 ~~~~v~~G~~a~l~C~~~~~~~~p~p~i~W~k~-~-~~~l~~~~~~~~~~r~~~~~~g---~L~I~~v~~~D~~G~Y~C~ 147 (167)
....+.+|++|.|.|.+.+. .+.+.|+|. . +..+.... ...+||....++ .|.|++++.+|+ |.|.|.
T Consensus 26 ~~~~v~~G~svtL~C~~s~~----~~~v~Wyrq~~~g~~~~~l~--~~~~rf~~~~~~~~~~L~I~~~~~~Ds-g~Y~C~ 98 (134)
T 3kg5_A 26 RFIARKRGFTVKMHCYMNSA----SGNVSWLWKQEMDENPQQLK--LEKGRMEESQNESLATLTIQGIRFEDN-GIYFCQ 98 (134)
T ss_dssp SEEEEETTCCEEEEEECCCT----TCCCEEEEESSSSSCCEECC--CCTTTEEEEECSSEEEEEECSCCTTTC-EEEEEE
T ss_pred CEEEEeCCCCEEEEEEECCC----CceEEEEEECCCCCCcEEEE--EECCeEEEEccCCEEEEEECCCCcCcC-EEEEEE
Confidence 34678899999999999742 356899987 2 22221100 124677665433 699999999999 999999
Q ss_pred eeec------CcceEEEeeeC
Q psy12724 148 TKHR------LTGETRLSATK 162 (167)
Q Consensus 148 a~n~------~~~~~~l~~~~ 162 (167)
+.+. +...++|.+.+
T Consensus 99 ~~~~~~~~~~fg~GT~L~V~~ 119 (134)
T 3kg5_A 99 QKCNNTSEVYQGCGTELRVMG 119 (134)
T ss_dssp EECTTTCCEEECCCEEEEEEC
T ss_pred EEcCCCCceEECCCEEEEEec
Confidence 9876 24456666643
No 495
>1x9q_A SCFV, 4M5.3 anti-fluorescein single chain antibody fragment; VERY high affinity, antibody binding, electrostatics, directed evolution; HET: FLU; 1.50A {Homo sapiens}
Probab=98.82 E-value=6.5e-09 Score=80.70 Aligned_cols=86 Identities=21% Similarity=0.303 Sum_probs=56.8
Q ss_pred ecCeEEEeCCcEEEEeeeCCccCCc-----ceeEEEEeCC-Cee---eEEe---eeecCCceEEEccC---CeEEEeecC
Q psy12724 72 IMDEHVLKGNSAVLKCHIPSFVADY-----VAVESWISDQ-GEE---LFVD---MTESTDGKYLVLPS---GELHIRDVG 136 (167)
Q Consensus 72 ~~~~~v~~G~~a~l~C~~~~~~~~p-----~p~i~W~k~~-~~~---l~~~---~~~~~~~r~~~~~~---g~L~I~~v~ 136 (167)
+.+..+.+|++|+|.|.+.+. | .+.+.|+|++ +.. +... ..+...+|+.+..+ ..|.|.+++
T Consensus 22 p~~~~v~~G~~v~L~C~~~~~---~~~~~~~~~v~W~k~~~g~~~~~l~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~ 98 (268)
T 1x9q_A 22 PLSLPVSLGDQASISCRSSQS---LVHSNGNTYLRWYLQKPGQSPKVLIYKVSNRVSGVPDRFSGSGSGTDFTLKINRVE 98 (268)
T ss_dssp CSEECCCTTCCEEEEEEESSC---CBCTTSCBCEEEEEECTTSCCEEEEETTTEECTTSCTTEEEEEETTEEEEEESSCC
T ss_pred CCeEEecCCCCEEEEeEecCC---cccccCCceEEEEEECCCCCCEEEEEecCCCCCCCcccEEEEcCCCEEEEEECCCC
Confidence 345677899999999999753 4 4789999863 111 1100 00012467776532 379999999
Q ss_pred cCCCCcceEEEeeecC----cceEEEeee
Q psy12724 137 PEDGYKSYQCRTKHRL----TGETRLSAT 161 (167)
Q Consensus 137 ~~D~~G~Y~C~a~n~~----~~~~~l~~~ 161 (167)
.+|+ |.|.|.+.|.. +..+.|.+.
T Consensus 99 ~~Ds-G~Y~C~~~~~~~~~~~~~~~L~V~ 126 (268)
T 1x9q_A 99 AEDL-GVYFCSQSTHVPWTFGGGTKLEIK 126 (268)
T ss_dssp GGGC-EEEEEEECSSSSCEECCCEEEC--
T ss_pred hhHC-EEEEEEEecCCCceEcCCEEEEEc
Confidence 9999 99999999873 334555553
No 496
>1b6u_A KIR2DL3, P58 killer cell inhibitory receptor; natural killer cell, HLA, major histocompatibility complex class I (MHC class I); 3.00A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4
Probab=98.82 E-value=5.4e-09 Score=81.80 Aligned_cols=68 Identities=10% Similarity=0.026 Sum_probs=48.6
Q ss_pred eEEEeCCcEEEEeeeCCccCCcceeEEEEeCCCeeeEEeeeecCCceEE-EccCCeEEEeecCcCCCCcceEEEeeec
Q psy12724 75 EHVLKGNSAVLKCHIPSFVADYVAVESWISDQGEELFVDMTESTDGKYL-VLPSGELHIRDVGPEDGYKSYQCRTKHR 151 (167)
Q Consensus 75 ~~v~~G~~a~l~C~~~~~~~~p~p~i~W~k~~~~~l~~~~~~~~~~r~~-~~~~g~L~I~~v~~~D~~G~Y~C~a~n~ 151 (167)
..+.+|++++|.|.+.+ +.+.+.|+||+. .+.+.. ...++. ...++.|.|.+++.+|+ |.|+|.|.|.
T Consensus 16 ~~V~~G~~VtL~C~~~~----~~~~~~W~k~g~-~~~~~~---~~~~~~~~~~~~~L~I~~v~~~Ds-G~Y~C~a~~~ 84 (257)
T 1b6u_A 16 PLVKSEETVILQCWSDV----RFQHFLLHREGK-FKDTLH---LIGEHHDGVSKANFSIGPMMQDLA-GTYRCYGSVT 84 (257)
T ss_dssp SEEESSCCEEEEEEESS----CCSEEEEEEEST-TCEEEE---EECBCCTTCEEEEEEECSCCTTTC-EEEEEEEECS
T ss_pred CEecCCCCEEEEEecCC----CCcEEEEEECCC-CCCcce---eeeeccCCCceEEEEeecCCcccC-EEEEEeEecc
Confidence 56789999999999963 456899999973 443211 001110 12356899999999999 9999999863
No 497
>3fku_X Neutralizing antibody F10; influenza, hemagglutinin, SCFV, F membrane, envelope protein, fusion protein, membrane, trans virion; HET: NAG BMA; 3.20A {Homo sapiens}
Probab=98.82 E-value=3.8e-09 Score=82.89 Aligned_cols=78 Identities=18% Similarity=0.257 Sum_probs=53.6
Q ss_pred ecCeEEEeCCcEEEEeeeCCccCCcceeEEEEeCC-Cee---eEEe--------eeecCCceEEEccCC-----eEEEee
Q psy12724 72 IMDEHVLKGNSAVLKCHIPSFVADYVAVESWISDQ-GEE---LFVD--------MTESTDGKYLVLPSG-----ELHIRD 134 (167)
Q Consensus 72 ~~~~~v~~G~~a~l~C~~~~~~~~p~p~i~W~k~~-~~~---l~~~--------~~~~~~~r~~~~~~g-----~L~I~~ 134 (167)
+.+..+.+|++|+|+|.+.+. ..+.+.+.|+|.. +.. +... ..+...+|+.+..++ .|.|++
T Consensus 7 p~~~~v~~G~~v~L~C~~~~~-~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~sL~I~~ 85 (280)
T 3fku_X 7 SGAEVKKPGSSVKVSCTSSEV-TFSSFAISWVRQAPGQGLEWLGGISPMFGTPNYAQKFQGRVTITADQSTRTAYMDLRS 85 (280)
T ss_dssp CCCCEECTTCCEEEEEEECCS-CCTTSCEEECCBCSSSCCCCCEEECTTTCCEEECGGGTTTCEEEEETTTTEEEEEECS
T ss_pred CCCEEECCCCcEEEEEEeecc-CCCCeEEEEEEeCCCCCCEEEEEEeccCCccccCcccCCcEEEEEeCCCCEEEEEECC
Confidence 455678899999999999753 2256789999743 111 1110 000123577766332 699999
Q ss_pred cCcCCCCcceEEEeeec
Q psy12724 135 VGPEDGYKSYQCRTKHR 151 (167)
Q Consensus 135 v~~~D~~G~Y~C~a~n~ 151 (167)
++.+|+ |.|.|.+.|.
T Consensus 86 v~~~Ds-G~Y~C~~~~~ 101 (280)
T 3fku_X 86 LRSEDT-AVYYCARSPS 101 (280)
T ss_dssp CCSTTC-EECCEEECSS
T ss_pred CChhhC-EEEEEEEecC
Confidence 999999 9999999997
No 498
>3bqu_C 3H6 FAB light chain; beta sheet, immune system; 3.00A {Mus musculus}
Probab=98.81 E-value=6.6e-10 Score=83.95 Aligned_cols=77 Identities=16% Similarity=0.241 Sum_probs=41.0
Q ss_pred ecCeEEEeCCcEEEEeeeCCccCCcceeEEEEeCCC-eeeEE-ee-----eecCCceEEEccCC---eEEEeecCcCCCC
Q psy12724 72 IMDEHVLKGNSAVLKCHIPSFVADYVAVESWISDQG-EELFV-DM-----TESTDGKYLVLPSG---ELHIRDVGPEDGY 141 (167)
Q Consensus 72 ~~~~~v~~G~~a~l~C~~~~~~~~p~p~i~W~k~~~-~~l~~-~~-----~~~~~~r~~~~~~g---~L~I~~v~~~D~~ 141 (167)
+.+..+.+|++|.|+|.+.+ .|.+.++|+|++. ..+.. .+ .....+|+.+..++ .|.|.+++.+|+
T Consensus 30 p~~~~v~~G~~v~L~C~~~~---~~~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~D~- 105 (233)
T 3bqu_C 30 PASLSMSIGEKVTIRCITST---DIDDDMNWYQQKPGEPPRLLISDGNTLRPGVPSRFSSSGYGTDFVFTIENMLSEDV- 105 (233)
T ss_dssp CSBC-------CCEEEEEEE---EESSCEEEEEECTTSCCEEEECTTSCBCTTSCTTCCCCEEEEEEEEC-----CCCC-
T ss_pred CCeEEEecCCCEEEEEecCC---cCCCeEEEEEECCCCCcEEEEEcCCccCCCCCccEEeeccCCEEEEEECCCCHHHC-
Confidence 44567889999999999874 3667899998641 11100 00 00113455444322 799999999999
Q ss_pred cceEEEeeecC
Q psy12724 142 KSYQCRTKHRL 152 (167)
Q Consensus 142 G~Y~C~a~n~~ 152 (167)
|.|.|.|.|..
T Consensus 106 G~Y~C~~~~~~ 116 (233)
T 3bqu_C 106 ADYYCLQSDNL 116 (233)
T ss_dssp SEEEEEECSSS
T ss_pred EEEEEEEecCC
Confidence 99999999864
No 499
>2atp_B T-cell surface glycoprotein CD8 beta chain; CD8AB, CD8AA, MHC, immune system; HET: NAG; 2.40A {Mus musculus} SCOP: b.1.1.1 PDB: 3b9k_B*
Probab=98.81 E-value=2.7e-08 Score=68.03 Aligned_cols=76 Identities=21% Similarity=0.321 Sum_probs=51.6
Q ss_pred cCeEEEeCCcEEEEeeeCCccCCcceeEEEEeCCC----e---eeEEeee--------ecCCceEEEcc--C---CeEEE
Q psy12724 73 MDEHVLKGNSAVLKCHIPSFVADYVAVESWISDQG----E---ELFVDMT--------ESTDGKYLVLP--S---GELHI 132 (167)
Q Consensus 73 ~~~~v~~G~~a~l~C~~~~~~~~p~p~i~W~k~~~----~---~l~~~~~--------~~~~~r~~~~~--~---g~L~I 132 (167)
....+.+|++|+|+|.+.+. .+.+.+.|+|... . .+..... ....+|+.+.. + ..|.|
T Consensus 6 ~~~~~~~G~~vtL~C~~~~~--~~~~~v~W~r~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~~L~I 83 (115)
T 2atp_B 6 SSLLVQTNHTAKMSCEVKSI--SKLTSIYWLRERQDPKDKYFEFLASWSSSKGVLYGESVDKKRNIILESSDSRRPFLSI 83 (115)
T ss_dssp SEEEECTTSCEEEEEECCSS--CCSSEEEEEEEEECSSCEEEEEEEEEETTTEEEECGGGTTTCCEEEESTTSSSCEEEE
T ss_pred CCEEEcCCCcEEEEEEecCC--CCcccEEEEEeCCCCCCCccEEEEEEeCCCCeEecCCCccCcEEEEEeCCCCEEEEEE
Confidence 34577899999999999743 1356789998541 1 1211000 01146777654 2 27999
Q ss_pred eecCcCCCCcceEEEeeec
Q psy12724 133 RDVGPEDGYKSYQCRTKHR 151 (167)
Q Consensus 133 ~~v~~~D~~G~Y~C~a~n~ 151 (167)
++++.+|+ |.|.|.+.+.
T Consensus 84 ~~~~~~Ds-G~Y~C~~~~~ 101 (115)
T 2atp_B 84 MNVKPEDS-DFYFCATVGS 101 (115)
T ss_dssp CSCCGGGC-EEEEEEEECS
T ss_pred CCCCHHHC-EEEEEeEccC
Confidence 99999999 9999999864
No 500
>3sob_H Antibody heavy chain, low-density lipoprotein receptor-related protein; beta propeller, protein binding-immune system complex; 1.90A {Homo sapiens} PDB: 1pkq_B 3uls_H 3ulu_D* 3ulv_D*
Probab=98.80 E-value=1.3e-08 Score=78.55 Aligned_cols=133 Identities=15% Similarity=0.277 Sum_probs=79.5
Q ss_pred eeceeeEEeEEEEEeCCcEEEEeecCCCCCCcceeeEEeeCC-Cc---eeee--c-----------CCce----------
Q psy12724 10 SQYYEAQVYDVFVIKGNAAVFKCNLPSFVSDHLDVVSWADTD-GG---QYQI--D-----------NQDF---------- 62 (167)
Q Consensus 10 ~~~~~~~~~~~~v~~G~~~~l~C~a~~~~~~~~~~i~W~k~~-~~---~~~~--~-----------~~~~---------- 62 (167)
.+.....+..+.+.+|+++.|.|.+.+.... ...+.|+|.+ +. .+.. . ..|.
T Consensus 23 ~~~~v~~~~~~~v~~G~~v~L~C~~~~~~~~-~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~ 101 (256)
T 3sob_H 23 AEVQLVESGGGLVQPGGSLRLSCAASGFTFT-NSYIHWVRQAPGKGLEWVGWITPYGGYTNYADSVKGRFTISADTSKNT 101 (256)
T ss_dssp -CCEEEEECCCEECTTCCEEEEEEEESSCGG-GSCEEEEEECTTCCCEEEEEEETTTTEEEECTTTTTTEEEEEEGGGTE
T ss_pred cceEEEecCcEEEcCCCCEEEEEEeeccccC-CCEEEEEEECCCCCcEEEEEEecCCCceecCCCCCCcEEEEEeCCCCE
Confidence 3334455667789999999999999754322 2469998742 11 1100 0 0110
Q ss_pred --E--------EEeeeEEEecC---------------------eE-------------------EEeCCcEEEEeeeCCc
Q psy12724 63 --V--------VSQSYTVNIMD---------------------EH-------------------VLKGNSAVLKCHIPSF 92 (167)
Q Consensus 63 --v--------~~g~y~c~~~~---------------------~~-------------------v~~G~~a~l~C~~~~~ 92 (167)
+ .+|.|.|.+.+ .. +.+|+.+.|.|.+.+.
T Consensus 102 ~sL~I~~v~~~DsG~Y~C~~~~~~~~~~~~~~~~~~~~~~~~~l~V~~~~~~~P~i~~~~~~~~~~~g~~v~L~C~~~~~ 181 (256)
T 3sob_H 102 AYLQMNSLRAEDTAVYYCARGSGHVNAVKNYGYVMDYWGQGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDY 181 (256)
T ss_dssp EEEEECSCCGGGCEEEEEEEESSCTTCSSCCTTSEEEECCCEEEEECSSCCBCCEEEEECCC-----TTEEEEEEEEEEE
T ss_pred EEEEECCCCcccCEEEEEEEecCCCccccccccceeEECCCEEEEEecCCCCCCEEEEECCCcccccCCcEEEEEEEEEE
Confidence 1 17999998742 00 1368899999999764
Q ss_pred cCCc-ceeEEEEeCCCeeeEE---ee--eecCCceEEEccCCeEEEeecCcCCCCcceEEEeeecC
Q psy12724 93 VADY-VAVESWISDQGEELFV---DM--TESTDGKYLVLPSGELHIRDVGPEDGYKSYQCRTKHRL 152 (167)
Q Consensus 93 ~~~p-~p~i~W~k~~~~~l~~---~~--~~~~~~r~~~~~~g~L~I~~v~~~D~~G~Y~C~a~n~~ 152 (167)
. | .+.++| ++ ..+.. .. ....++.|.+. ..|.|.....+| |.|+|.+.|..
T Consensus 182 ~--p~~~~v~W--~~-~~~~~~~~~~~~~~~~~g~~~~~--s~L~i~~~~~~d--~~ytC~v~~~~ 238 (256)
T 3sob_H 182 F--PEPVTVSW--NS-GALTSGVHTFPAVLQSSGLYSLS--SVVTVPSSSLGT--QTYICNVNHKP 238 (256)
T ss_dssp B--SSCCEEEE--GG-GTBCTTEEECCCEECTTSCEEEE--EEEEEEGGGTTT--CCCEEEEEEGG
T ss_pred E--CCCeEEEE--CC-cccCCCeEeCCceeCCCCCEEEE--EEEEECHHHcCC--ceEEEEEEeCC
Confidence 2 4 457899 43 22210 00 01233455442 369999887777 99999999986
Done!