Query psy12725
Match_columns 119
No_of_seqs 119 out of 1085
Neff 12.2
Searched_HMMs 29240
Date Fri Aug 16 18:05:41 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy12725.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/12725hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2a38_A Titin; Z1Z2, structural 99.9 2E-23 7E-28 115.7 11.3 117 1-117 19-146 (194)
2 2yd6_A PTPRD protein; hydrolas 99.9 5.5E-22 1.9E-26 111.6 13.9 117 1-117 20-151 (212)
3 3k0w_A Mucosa-associated lymph 99.9 1.2E-21 4.1E-26 110.7 15.3 117 1-117 32-161 (218)
4 4fa8_A Secreted protein BARF1; 99.9 2.8E-23 9.6E-28 116.4 7.9 110 1-113 7-145 (203)
5 2c5d_C AXL oncogene, tyrosine- 99.9 6.2E-22 2.1E-26 109.9 12.7 115 1-117 16-150 (195)
6 2yd1_A Tyrosine-protein phosph 99.9 2.6E-21 9E-26 108.7 15.0 117 1-117 20-153 (212)
7 2wv3_A Neuroplastin; igcam, me 99.9 2.5E-21 8.4E-26 107.2 13.1 111 2-116 18-136 (190)
8 3b43_A Titin; I-SET IG fold, e 99.9 1.5E-21 5E-26 123.3 13.7 117 1-117 19-144 (570)
9 1rhf_A Tyrosine-protein kinase 99.9 2.7E-21 9.3E-26 106.3 13.0 114 1-117 16-142 (182)
10 2rik_A Titin; I-SET IG fold, p 99.9 5.4E-21 1.9E-25 111.4 14.7 114 1-117 113-235 (284)
11 2j8h_A Titin, connectin; cardi 99.9 2.6E-21 8.7E-26 107.5 12.8 117 1-117 18-147 (197)
12 3lcy_A Titin; A-BAND, IG tande 99.9 1.7E-21 5.9E-26 108.0 12.1 114 1-117 21-146 (197)
13 2yd9_A Receptor-type tyrosine- 99.9 1.2E-21 4.3E-26 115.2 11.8 117 1-117 122-248 (304)
14 3kld_A Contactin 4, axcam, BIG 99.9 2.4E-21 8.3E-26 117.3 13.3 114 1-117 219-338 (384)
15 3b43_A Titin; I-SET IG fold, e 99.9 4.4E-21 1.5E-25 121.2 15.0 117 1-117 115-240 (570)
16 1epf_A NCAM, protein (neural c 99.9 4E-21 1.4E-25 106.2 13.1 114 1-116 16-142 (191)
17 3p3y_A Neurofascin; IG domains 99.9 2.3E-21 7.7E-26 117.6 12.7 114 1-117 236-355 (404)
18 2d3v_A Leukocyte immunoglobuli 99.9 4.5E-21 1.6E-25 106.7 11.4 112 1-115 18-139 (196)
19 2iep_A Muscle-specific kinase 99.9 4.9E-21 1.7E-25 105.9 11.5 114 1-117 21-143 (192)
20 2v5t_A NCAM2, N-CAM 2, neural 99.9 9.5E-21 3.3E-25 104.5 12.3 116 1-117 16-141 (189)
21 2rik_A Titin; I-SET IG fold, p 99.9 2.3E-20 7.9E-25 108.7 13.9 114 1-117 19-142 (284)
22 2v44_A NCAM2, neural cell adhe 99.9 1.9E-20 6.5E-25 103.4 12.7 113 1-116 16-138 (189)
23 2yd9_A Receptor-type tyrosine- 99.9 1.3E-20 4.5E-25 110.8 12.7 117 1-117 20-151 (304)
24 1bih_A Hemolin; insect immunit 99.9 1.2E-20 4.1E-25 114.2 12.7 114 1-117 226-352 (395)
25 2jll_A NCAM2, neural cell adhe 99.9 1.2E-20 4.1E-25 114.0 12.4 114 1-117 14-143 (389)
26 2gi7_A GPVI protein; IG-like d 99.9 2.6E-20 8.7E-25 102.8 12.5 112 1-116 21-134 (184)
27 1uct_A Immunoglobulin alpha FC 99.9 1E-20 3.5E-25 107.0 11.1 114 1-116 22-147 (218)
28 2pet_A Lutheran blood group gl 99.9 2.3E-20 7.9E-25 105.8 12.5 117 1-117 14-163 (231)
29 3nl4_L Antigen binding fragmen 99.9 9.7E-21 3.3E-25 106.4 10.1 117 1-117 15-158 (213)
30 1vca_A VCAM-D1,2, human vascul 99.9 2E-20 6.9E-25 104.7 11.3 113 1-116 15-136 (202)
31 3p2t_A Leukocyte immunoglobuli 99.9 1.6E-20 5.4E-25 104.5 10.8 112 1-115 18-139 (196)
32 1cs6_A Axonin-1; neural cell a 99.9 2.6E-20 8.7E-25 112.5 12.3 114 1-117 221-337 (382)
33 2v5m_A Dscam; neurobiology SPL 99.8 1.4E-20 4.7E-25 113.8 10.7 114 1-117 226-350 (388)
34 3laf_A Deleted in colorectal c 99.8 2.5E-20 8.5E-25 113.1 11.9 114 1-117 235-355 (403)
35 3qs7_E FL cytokine receptor; i 99.8 2.2E-20 7.6E-25 114.6 11.7 111 1-117 241-369 (423)
36 2va4_A NCAM2, N-CAM 2, neural 99.8 5.9E-20 2E-24 101.5 12.4 112 1-116 18-138 (192)
37 3rbs_A Myomesin-1; immunoglobu 99.8 4.6E-20 1.6E-24 103.6 11.9 113 2-117 17-160 (207)
38 1ugn_A LIR1, leukocyte immunog 99.8 3.4E-20 1.2E-24 103.3 11.0 112 1-115 18-140 (198)
39 1qz1_A Neural cell adhesion mo 99.8 7.2E-20 2.5E-24 106.9 12.7 116 1-117 114-239 (291)
40 3grw_A Fibroblast growth facto 99.8 5.8E-20 2E-24 104.8 12.1 116 1-116 29-160 (241)
41 1f97_A Junction adhesion molec 99.8 2.9E-20 9.8E-25 104.1 10.3 115 1-116 15-148 (212)
42 1jbj_A CD3 epsilon and gamma e 99.8 1.3E-20 4.4E-25 104.3 8.7 110 2-116 14-146 (186)
43 2r15_A Myomesin-1; sarcomeric 99.8 5.7E-20 1.9E-24 103.0 11.4 116 2-117 17-160 (212)
44 2nzi_A Titin; IG-domain, FNIII 99.8 6.1E-20 2.1E-24 107.9 11.9 114 1-117 18-147 (305)
45 3mj8_L Stimulatory hamster ant 99.8 3.9E-20 1.3E-24 103.9 10.3 117 1-117 14-159 (213)
46 3r4d_A CEA-related cell adhesi 99.8 3.2E-19 1.1E-23 99.7 14.0 114 1-117 13-152 (208)
47 1qz1_A Neural cell adhesion mo 99.8 1.9E-19 6.4E-24 105.2 13.4 114 1-116 16-142 (291)
48 3sgj_C Human FCG3A receptor; r 99.8 2E-19 7E-24 100.8 13.0 109 1-116 21-131 (204)
49 3ojm_B Fibroblast growth facto 99.8 4.2E-20 1.4E-24 104.6 10.3 115 1-115 33-163 (231)
50 2wng_A Tyrosine-protein phosph 99.8 1.5E-19 5E-24 107.3 12.8 115 1-117 17-162 (327)
51 2wim_A N-CAM 2, NCAM2, neural 99.8 1.3E-19 4.5E-24 105.8 12.3 116 1-117 112-237 (291)
52 3dmk_A DOWN syndrome cell adhe 99.8 1.4E-19 4.8E-24 118.0 13.5 116 1-117 357-472 (816)
53 1itb_B Type 1 interleukin-1 re 99.8 2.4E-19 8.2E-24 105.8 13.2 117 1-117 117-252 (315)
54 3d9a_L Light chain of hyhel10 99.8 8.9E-20 3E-24 102.5 10.6 117 1-117 15-157 (213)
55 1nbq_A JAM, junctional adhesio 99.8 2E-20 6.8E-25 104.6 7.9 116 1-117 18-151 (209)
56 1lk3_L 9D7 light chain; antige 99.8 1.4E-19 4.7E-24 101.6 10.9 117 1-117 14-156 (210)
57 1fnl_A Low affinity immunoglob 99.8 3E-19 1E-23 97.8 12.0 109 1-116 21-131 (175)
58 1nkr_A P58-CL42 KIR; inhibitor 99.8 1.8E-19 6.3E-24 100.6 11.3 113 1-116 21-148 (201)
59 2vr9_A Roundabout 1, ROBO; imm 99.8 1E-19 3.4E-24 102.5 10.0 114 1-116 23-151 (217)
60 1hng_A CD2; T lymphocyte adhes 99.8 9.6E-20 3.3E-24 100.0 9.6 109 1-117 10-138 (176)
61 3bp6_B Programmed cell death 1 99.8 1.5E-19 5.2E-24 100.8 10.4 111 1-115 16-144 (202)
62 2v9r_A Roundabout homolog 1; p 99.8 2.1E-19 7E-24 100.7 10.8 115 1-117 23-155 (212)
63 1gsm_A Madcam-1, mucosal addre 99.8 6E-19 2.1E-23 98.9 12.3 111 1-117 21-142 (210)
64 3r06_A Anti-mouse CD3epsilon a 99.8 1.5E-19 5E-24 101.6 9.9 117 1-117 15-157 (213)
65 1dr9_A B7-1 (CD80), T lymphocy 99.8 1.3E-19 4.3E-24 101.1 9.5 112 1-116 8-149 (201)
66 3s97_C Contactin-1; carbonic a 99.8 9.9E-20 3.4E-24 101.2 8.6 116 1-116 22-155 (201)
67 3oq3_B IFN-alpha/beta binding 99.8 7.1E-19 2.4E-23 104.6 12.8 115 1-115 142-273 (329)
68 1f2q_A High affinity immunoglo 99.8 2.2E-19 7.7E-24 98.3 9.9 109 1-116 18-128 (176)
69 2fbo_J V1V2;, variable region- 99.8 2.3E-19 8E-24 102.7 10.0 116 1-116 16-178 (250)
70 1oll_A NK receptor; immune sys 99.8 2.7E-19 9.3E-24 99.0 9.9 112 1-115 17-138 (188)
71 1e07_A Carcinoembryonic antige 99.8 2.5E-18 8.6E-23 109.7 14.5 113 2-116 126-245 (642)
72 3sob_L Antibody light chain; b 99.8 2.7E-19 9.3E-24 101.8 9.0 117 1-117 38-180 (237)
73 3s96_B 3B5H10 FAB light chain; 99.8 2.3E-19 7.8E-24 101.1 8.4 117 1-117 14-166 (218)
74 1e07_A Carcinoembryonic antige 99.8 2.4E-18 8.3E-23 109.8 14.1 114 1-117 481-602 (642)
75 3qs9_E FL cytokine receptor; i 99.8 4.3E-19 1.5E-23 111.4 10.3 111 1-117 241-369 (527)
76 2if7_A SLAM family member 6; N 99.8 1.2E-18 4E-23 96.9 11.1 114 1-116 12-152 (193)
77 3rjd_A High affinity immunoglo 99.8 1.3E-18 4.4E-23 100.2 11.4 115 1-116 96-217 (262)
78 3qs7_E FL cytokine receptor; i 99.8 8E-19 2.7E-23 107.7 11.1 111 1-115 62-180 (423)
79 2ec8_A MAST/stem cell growth f 99.8 8.3E-19 2.8E-23 109.7 11.2 114 1-117 225-357 (524)
80 4dep_C Interleukin-1 receptor 99.8 3.4E-19 1.2E-23 106.5 9.0 117 1-117 134-273 (349)
81 3tv3_L PGT128 light chain, IG 99.8 4.9E-19 1.7E-23 99.3 9.1 115 1-117 14-156 (211)
82 3ry4_A Low affinity immunoglob 99.8 4E-18 1.4E-22 92.7 12.3 109 1-116 18-128 (170)
83 1q0x_L FAB 9B1, light chain; a 99.8 5.1E-19 1.7E-23 99.4 8.9 117 1-117 14-160 (212)
84 1b6u_A KIR2DL3, P58 killer cel 99.8 3.3E-18 1.1E-22 98.9 12.4 113 1-116 20-147 (257)
85 1ry7_B FGFR-3, fibroblast grow 99.8 3.1E-19 1.1E-23 106.1 8.2 114 2-115 138-267 (334)
86 2xzc_L FAB A.17 light chain; i 99.8 1.3E-18 4.4E-23 98.0 10.2 117 1-117 14-159 (216)
87 3rjd_A High affinity immunoglo 99.8 5.6E-18 1.9E-22 97.5 13.0 109 1-116 15-125 (262)
88 3o4o_C Interleukin-1 receptor 99.8 5.3E-19 1.8E-23 105.3 8.8 116 1-116 134-272 (339)
89 3b5h_A Cervical EMMPRIN, HAB18 99.8 6.1E-18 2.1E-22 93.0 12.3 102 1-110 12-120 (184)
90 4frw_A Poliovirus receptor-rel 99.8 5.8E-18 2E-22 94.8 11.9 115 1-116 13-160 (218)
91 3jz7_A MCAR, CAR, coxsackievir 99.8 2.6E-18 9E-23 96.2 10.2 108 1-111 14-159 (214)
92 2wim_A N-CAM 2, NCAM2, neural 99.8 3.8E-18 1.3E-22 99.6 11.1 113 1-116 18-140 (291)
93 1c1e_H Catalytic antibody 1E9 99.8 1.2E-18 4.3E-23 98.2 8.7 115 1-115 14-167 (219)
94 3sbw_C Programmed cell death 1 99.8 1.4E-17 4.6E-22 94.0 12.9 111 1-115 15-158 (222)
95 2rgs_A I, IG gamma-2B heavy ch 99.8 7E-19 2.4E-23 99.4 7.5 116 1-116 25-161 (218)
96 2y25_A Myomesin; structural pr 99.8 1.3E-18 4.4E-23 102.6 8.8 116 2-117 113-265 (317)
97 2ifg_A High affinity nerve gro 99.8 7.8E-19 2.7E-23 105.2 7.5 110 1-117 172-289 (347)
98 3bkj_L WO2 IGG2A FAB fragment 99.8 2.1E-18 7.3E-23 99.2 9.0 117 1-117 48-195 (252)
99 2c1o_A IGK-C protein; FAB frag 99.8 2.1E-18 7.2E-23 99.2 8.8 117 1-117 52-199 (254)
100 2vol_A Murine IGG FC; FC, zinc 99.8 1E-18 3.5E-23 98.0 7.3 116 1-116 17-153 (207)
101 3o3u_N Maltose-binding peripla 99.8 6.4E-18 2.2E-22 106.9 11.5 115 1-117 380-516 (581)
102 3laf_A Deleted in colorectal c 99.8 6.1E-18 2.1E-22 102.6 11.0 115 1-116 35-163 (403)
103 2rcj_C Light chain; immunoglob 99.8 8E-18 2.7E-22 105.3 11.8 116 1-116 14-158 (523)
104 3oq3_B IFN-alpha/beta binding 99.8 2.5E-18 8.4E-23 102.3 9.1 114 1-116 43-171 (329)
105 1nfd_E H57 FAB; complex (immun 99.8 7.8E-19 2.7E-23 98.6 6.4 117 1-117 13-158 (212)
106 2ghw_B Anti-SARS SCFV antibody 99.8 1.3E-17 4.6E-22 95.5 11.3 113 1-113 16-176 (247)
107 3ejj_X Macrophage colony-stimu 99.8 1.6E-17 5.6E-22 96.9 11.8 117 1-117 103-230 (289)
108 2ny1_B T-cell surface glycopro 99.8 1.6E-18 5.5E-23 95.4 7.2 103 1-114 9-137 (184)
109 4f80_A Butyrophilin subfamily 99.8 3E-18 1E-22 97.1 8.4 107 1-112 18-157 (226)
110 3bqu_C 3H6 FAB light chain; be 99.8 3.2E-19 1.1E-23 101.4 4.4 117 1-117 37-179 (233)
111 2x1w_L Vascular endothelial gr 99.8 4.8E-18 1.7E-22 95.6 9.1 109 3-114 25-147 (213)
112 3vh8_G Killer cell immunoglobu 99.8 2.1E-17 7.1E-22 97.8 12.2 113 1-116 132-259 (316)
113 2y25_A Myomesin; structural pr 99.8 3E-19 1E-23 105.3 4.2 114 1-117 20-151 (317)
114 3pv7_A B7-H6, IG-like domain-c 99.8 1E-17 3.5E-22 96.1 10.4 109 1-113 17-159 (248)
115 4dzb_B Vbeta2 (MAIT T cell rec 99.8 6.9E-18 2.4E-22 96.7 9.7 117 1-117 15-170 (246)
116 1p6f_A NKP46, natural cytotoxi 99.8 9.5E-18 3.2E-22 96.3 10.2 112 1-115 20-141 (242)
117 2j6e_L IGM, FAB light chain; a 99.8 3.6E-18 1.2E-22 97.1 8.4 117 1-117 33-180 (234)
118 2ec8_A MAST/stem cell growth f 99.8 2.7E-18 9.1E-23 107.4 8.4 106 1-115 327-447 (524)
119 3qs9_E FL cytokine receptor; i 99.8 6.4E-18 2.2E-22 106.2 10.0 103 1-114 340-447 (527)
120 1ccz_A Protein (CD58); LFA-3, 99.8 1.5E-17 5.2E-22 90.9 10.4 105 1-116 9-132 (171)
121 3vh8_G Killer cell immunoglobu 99.8 2.3E-17 8E-22 97.5 11.8 112 1-115 37-158 (316)
122 2o26_X MAST/stem cell growth f 99.8 1.5E-17 5.2E-22 97.2 10.8 113 1-114 105-229 (290)
123 1q9r_B S25-2 FAB (IGG1K) heavy 99.8 9.7E-18 3.3E-22 94.8 9.4 115 1-115 14-170 (222)
124 3dmk_A DOWN syndrome cell adhe 99.8 4.1E-17 1.4E-21 106.6 13.4 113 1-117 443-569 (816)
125 2y23_A Myomesin; structural pr 99.8 9.1E-18 3.1E-22 98.8 9.4 115 2-117 16-151 (312)
126 2p1y_A Bispecific alpha/beta T 99.8 4E-17 1.4E-21 93.1 11.7 109 1-112 14-165 (238)
127 4dep_C Interleukin-1 receptor 99.8 1.1E-17 3.7E-22 100.0 9.7 115 1-117 21-168 (349)
128 1hnf_A CD2; T lymphocyte adhes 99.7 1.8E-17 6.2E-22 91.4 9.6 107 1-115 13-141 (182)
129 3o4o_C Interleukin-1 receptor 99.7 8E-19 2.7E-23 104.6 4.5 115 1-117 32-168 (339)
130 1sy6_A T-cell surface glycopro 99.7 6.3E-18 2.2E-22 94.7 7.6 105 2-116 18-153 (204)
131 2rcj_C Light chain; immunoglob 99.7 5E-17 1.7E-21 101.7 12.4 114 2-115 129-262 (523)
132 3d9a_H Heavy chain of hyhel10 99.7 6.5E-18 2.2E-22 94.8 7.6 113 1-114 14-160 (210)
133 2wng_A Tyrosine-protein phosph 99.7 6.8E-18 2.3E-22 100.2 8.1 113 1-116 131-264 (327)
134 1z7z_I Intercellular adhesion 99.7 9.3E-18 3.2E-22 103.3 8.9 112 1-117 13-132 (450)
135 1f3r_B FV antibody fragment; I 99.7 4E-17 1.4E-21 94.2 10.9 113 1-113 14-180 (257)
136 1wio_A CD4, T-cell surface gly 99.7 1.6E-18 5.5E-23 104.2 5.2 110 1-117 110-224 (363)
137 2y23_A Myomesin; structural pr 99.7 2.1E-17 7.1E-22 97.3 9.8 113 1-116 121-264 (312)
138 4fom_A Poliovirus receptor-rel 99.7 2.4E-18 8.2E-23 101.3 5.6 114 2-116 129-255 (308)
139 1za6_B IGG heavy chain; immuno 99.7 1.1E-17 3.6E-22 100.1 8.5 114 1-114 14-162 (344)
140 1itb_B Type 1 interleukin-1 re 99.7 8E-19 2.7E-23 103.6 3.5 114 1-116 19-151 (315)
141 2zg1_A Sialic acid-binding IG- 99.7 7.5E-17 2.6E-21 90.5 11.3 111 1-114 14-167 (214)
142 1z7z_I Intercellular adhesion 99.7 2.3E-17 8E-22 101.5 9.7 113 1-116 100-233 (450)
143 1moe_A Anti-CEA MAB T84.66; an 99.7 4.6E-17 1.6E-21 92.9 10.3 111 1-111 15-158 (240)
144 4i0k_A CD276 antigen; immunogl 99.7 1E-17 3.5E-22 94.5 7.4 113 1-115 9-153 (222)
145 3p3y_A Neurofascin; IG domains 99.7 1.5E-17 5.1E-22 100.9 8.4 112 1-113 31-156 (404)
146 1ry7_B FGFR-3, fibroblast grow 99.7 4.5E-19 1.5E-23 105.4 1.7 116 1-117 22-166 (334)
147 2v5m_A Dscam; neurobiology SPL 99.7 2.3E-17 8E-22 99.7 9.1 112 2-115 19-147 (388)
148 1i1c_A IGG2A, IG gamma-2A chai 99.7 9.7E-18 3.3E-22 96.1 6.9 116 1-116 31-167 (239)
149 1qgc_4 Protein (immunoglobulin 99.7 2.3E-17 7.7E-22 101.2 8.9 116 1-116 232-387 (438)
150 2dru_A Chimera of CD48 antigen 99.7 6.5E-17 2.2E-21 89.0 9.9 106 1-116 13-142 (180)
151 1nqb_A Single-chain antibody f 99.7 5.3E-17 1.8E-21 93.7 10.0 112 1-113 14-167 (256)
152 4fqp_A Poliovirus receptor; im 99.7 2.7E-17 9.3E-22 97.1 8.7 114 2-116 132-260 (313)
153 3pl6_D MBP peptide / T-cell re 99.7 3.7E-17 1.3E-21 94.8 9.1 116 1-117 40-191 (268)
154 1igt_B IGG2A intact antibody - 99.7 5.4E-17 1.8E-21 99.9 10.3 115 1-116 254-390 (444)
155 3nfj_J T cell receptor beta ch 99.7 4.6E-17 1.6E-21 93.2 9.3 117 1-117 15-169 (245)
156 1qgc_4 Protein (immunoglobulin 99.7 5.4E-17 1.9E-21 99.5 9.9 117 1-117 15-161 (438)
157 1wio_A CD4, T-cell surface gly 99.7 3.2E-17 1.1E-21 98.6 8.6 100 1-116 190-325 (363)
158 2ocw_A Polymeric-immunoglobuli 99.7 1.9E-16 6.5E-21 100.2 12.4 110 1-113 14-152 (585)
159 2w59_A IGY FCU3-4; immunoglobu 99.7 4.2E-17 1.4E-21 92.9 8.5 115 1-117 27-163 (231)
160 1op3_H FAB 2G12, heavy chain; 99.7 8.7E-17 3E-21 91.2 9.6 114 1-114 14-170 (225)
161 4ei6_B Vbeta16 XV19 type II na 99.7 1.2E-16 4.1E-21 91.5 10.2 116 1-117 16-169 (245)
162 1dee_B IGM RF 2A2; FAB-IBP com 99.7 2E-16 7E-21 89.6 10.9 116 1-116 14-171 (223)
163 1pz5_B Heavy chain of FAB (SYA 99.7 6E-17 2.1E-21 91.4 8.7 113 1-113 14-166 (220)
164 3eow_R Poliovirus receptor; im 99.7 6.4E-17 2.2E-21 91.3 8.8 108 1-112 13-155 (221)
165 3mj6_A Junctional adhesion mol 99.7 5.2E-17 1.8E-21 93.9 8.6 105 1-111 19-158 (268)
166 3esu_F Antibody 14B7* light ch 99.7 2.8E-16 9.6E-21 90.2 11.4 111 1-111 18-170 (250)
167 3umt_A SCFV heavy chain and li 99.7 1.6E-16 5.3E-21 91.6 10.2 111 1-111 16-175 (256)
168 3auv_A SC-DSFV derived from th 99.7 1.4E-16 4.9E-21 92.8 10.1 111 1-111 26-173 (276)
169 3to4_D NKT vbeta2 (mouse varia 99.7 1.1E-16 3.9E-21 92.1 9.4 116 1-117 15-169 (253)
170 1mju_H Immunoglobulin MS6-12; 99.7 7.9E-17 2.7E-21 91.5 8.6 115 1-115 14-164 (227)
171 1qok_A MFE-23 recombinant anti 99.7 1.7E-16 5.8E-21 92.7 10.2 113 1-114 40-203 (282)
172 3nl4_H Antigen binding fragmen 99.7 1.4E-16 4.7E-21 89.7 9.5 114 1-114 13-162 (215)
173 2wqr_A IG epsilon chain C regi 99.7 1.2E-16 4.2E-21 94.8 9.5 115 1-117 127-264 (323)
174 2o26_X MAST/stem cell growth f 99.7 6.2E-17 2.1E-21 94.6 8.1 105 1-116 26-134 (290)
175 1c5d_H Monoclonal antibody aga 99.7 2E-16 6.7E-21 89.2 9.9 114 1-114 14-164 (215)
176 2ocw_A Polymeric-immunoglobuli 99.7 2.8E-16 9.7E-21 99.4 11.6 112 1-116 345-488 (585)
177 2fbj_H IGA-kappa J539 FAB (hea 99.7 1.3E-16 4.6E-21 90.2 9.1 114 1-115 14-166 (220)
178 3v2a_R Vascular endothelial gr 99.7 8.4E-19 2.9E-23 113.6 0.0 115 2-117 564-709 (772)
179 3gkz_A Anti-methamphetamine si 99.7 2.5E-16 8.5E-21 90.8 10.2 110 1-110 22-178 (257)
180 3u83_A Poliovirus receptor-rel 99.7 7.9E-17 2.7E-21 95.6 8.3 111 3-116 151-275 (331)
181 1cs6_A Axonin-1; neural cell a 99.7 3.5E-17 1.2E-21 98.8 6.8 112 2-115 22-143 (382)
182 3bae_H WO2 IGG2A FAB fragment 99.7 7.6E-17 2.6E-21 91.6 7.8 114 1-114 14-172 (228)
183 2wbj_D OB TCR; transmembrane, 99.7 1.4E-16 4.8E-21 93.0 9.1 117 1-117 38-195 (279)
184 4fmk_A Poliovirus receptor-rel 99.7 5.9E-16 2E-20 87.0 11.2 112 1-114 15-162 (225)
185 3tf7_C 42F3 MUT7 SCFV (42F3 al 99.7 2.3E-16 8E-21 91.0 9.7 109 1-110 17-172 (256)
186 3knb_B Obscurin-like protein 1 99.7 1.7E-16 5.9E-21 80.5 8.1 69 1-69 27-104 (107)
187 3q5y_A TCR N15 beta; IG, T cel 99.7 2.8E-16 9.5E-21 89.8 9.9 116 1-117 16-167 (240)
188 4dkd_C Macrophage colony-stimu 99.7 1.5E-16 5.3E-21 92.8 9.0 115 1-116 103-229 (292)
189 1bec_A 14.3.D T cell antigen r 99.7 8.8E-16 3E-20 87.7 12.0 116 1-117 13-166 (238)
190 2znx_A SCFV; fluorotryptohpan, 99.7 5.1E-16 1.8E-20 88.9 11.0 111 1-111 15-161 (242)
191 3omz_A Human vdelta1 gamma del 99.7 3E-16 1E-20 90.6 9.9 111 1-111 16-174 (259)
192 3qib_D 2B4 beta chain; IG doma 99.7 2.8E-16 9.6E-21 91.2 9.8 116 1-117 41-194 (270)
193 3kld_A Contactin 4, axcam, BIG 99.7 3.8E-17 1.3E-21 99.0 6.2 113 2-116 23-145 (384)
194 4fqp_A Poliovirus receptor; im 99.7 1.1E-15 3.7E-20 90.3 12.2 114 1-116 14-160 (313)
195 4fom_A Poliovirus receptor-rel 99.7 1.2E-16 4.1E-21 94.1 8.2 114 1-116 13-157 (308)
196 1svz_A Immunoglobulin;, single 99.7 5.7E-16 1.9E-20 88.8 10.7 111 1-111 15-166 (247)
197 3knb_A Titin; IG-like, titin, 99.7 1.7E-16 5.9E-21 79.6 7.4 68 1-68 19-97 (100)
198 3juy_B 3B3 single chain varian 99.7 6E-16 2E-20 89.2 10.6 110 1-110 20-186 (256)
199 1l6x_A Immunoglobulin gamma-1 99.7 4.7E-16 1.6E-20 87.2 9.5 116 1-116 17-153 (207)
200 1bih_A Hemolin; insect immunit 99.7 4.8E-16 1.6E-20 94.1 10.0 115 1-117 114-255 (395)
201 3v2a_R Vascular endothelial gr 99.7 9.9E-17 3.4E-21 104.0 7.4 114 1-117 238-373 (772)
202 2xqy_G A13-D6.3 monoclonal ant 99.7 3E-16 1E-20 91.0 8.5 115 1-115 20-172 (261)
203 3ux9_B SCFV antibody; five hel 99.7 7.3E-16 2.5E-20 88.8 10.1 110 1-111 16-173 (256)
204 2eo9_A Roundabout homolog 1; b 99.7 4.7E-16 1.6E-20 80.1 8.3 88 1-89 22-116 (118)
205 1iga_A IGA1; immunoglobulin; N 99.7 1E-15 3.6E-20 95.0 11.2 116 1-117 261-395 (475)
206 2oz4_A Intercellular adhesion 99.7 8.6E-16 2.9E-20 88.9 9.9 108 1-115 17-135 (265)
207 3uzq_A Anti-dengue MAB 4E11; d 99.7 9.6E-16 3.3E-20 88.2 10.1 111 1-111 15-174 (253)
208 3m8o_H Immunoglobulin A1 heavy 99.7 5.4E-16 1.8E-20 87.6 8.8 114 1-115 14-167 (221)
209 1dn0_B IGM-kappa cold agglutin 99.7 1.4E-15 4.7E-20 86.7 10.3 116 1-116 14-171 (232)
210 2oz4_A Intercellular adhesion 99.7 2.6E-16 9E-21 91.0 7.1 108 1-113 112-224 (265)
211 2aty_A Complement receptor chi 99.7 2.4E-15 8.2E-20 91.1 11.4 116 1-116 182-318 (376)
212 3bn9_D E2 FAB heavy chain; ant 99.7 2.2E-16 7.6E-21 91.3 6.4 114 1-114 14-175 (257)
213 2cqv_A MLCK, myosin light chai 99.7 2.1E-15 7.3E-20 77.2 9.2 69 1-69 21-98 (114)
214 1oga_E TRBC1, T-cell receptor 99.7 2E-15 6.8E-20 86.9 10.0 116 1-117 17-168 (252)
215 3ejj_X Macrophage colony-stimu 99.6 2.1E-15 7.3E-20 87.9 9.9 109 1-116 18-133 (289)
216 1hxm_B Gamma-delta T-cell rece 99.6 1.9E-15 6.6E-20 86.5 9.4 115 1-115 15-176 (242)
217 2ens_A Advanced glycosylation 99.6 6.6E-16 2.3E-20 76.8 6.6 69 1-69 24-92 (96)
218 3bfo_A Mucosa-associated lymph 99.6 2.4E-15 8E-20 74.1 8.5 59 1-59 17-75 (91)
219 2dm2_A Palladin; beta-sandwich 99.6 3E-15 1E-19 76.2 9.0 70 1-70 22-102 (110)
220 1igy_B IGG1 intact antibody MA 99.6 2.3E-17 8E-22 101.3 1.3 115 1-116 244-380 (434)
221 3liz_H 4C3 monoclonal antibody 99.6 9E-16 3.1E-20 88.4 7.7 113 1-113 14-165 (253)
222 1hzh_H IGG, immunoglobulin hea 99.6 2.2E-15 7.4E-20 93.1 9.7 114 1-114 14-174 (457)
223 3mjg_X Beta-type platelet-deri 99.6 5.4E-16 1.8E-20 90.5 6.5 107 1-113 109-220 (289)
224 2dav_A SLOW MYBP-C, myosin-bin 99.6 1.8E-15 6.1E-20 78.5 7.4 79 1-79 21-121 (126)
225 2gjj_A A21 single-chain antibo 99.6 5E-15 1.7E-19 85.8 10.2 111 1-111 19-177 (264)
226 1wit_A Twitchin 18TH IGSF modu 99.6 1.1E-15 3.8E-20 75.6 6.3 68 1-68 16-92 (93)
227 1g1c_A Immunoglobulin-like dom 99.6 3.3E-15 1.1E-19 74.6 8.0 68 1-68 19-96 (99)
228 2gki_A Nuclease; anti-DNA anti 99.6 4.4E-15 1.5E-19 87.2 9.7 111 1-111 36-202 (291)
229 2xot_A Amphoterin-induced prot 99.6 2.4E-15 8.1E-20 90.7 8.4 92 1-107 260-360 (361)
230 2edj_A Roundabout homolog 2; K 99.6 7.1E-15 2.4E-19 73.5 8.9 69 1-69 22-97 (100)
231 3kvq_A Vascular endothelial gr 99.6 2.4E-15 8.1E-20 76.2 7.2 70 1-70 24-100 (108)
232 1igy_B IGG1 intact antibody MA 99.6 3.4E-16 1.2E-20 96.1 4.7 114 1-114 13-161 (434)
233 1za6_B IGG heavy chain; immuno 99.6 1.2E-15 4.3E-20 91.2 7.0 115 1-116 134-286 (344)
234 1igt_B IGG2A intact antibody - 99.6 2.7E-15 9.2E-20 92.4 8.4 115 1-116 137-286 (444)
235 2yr3_A Myosin light chain kina 99.6 4.2E-15 1.4E-19 74.2 7.7 68 1-68 25-98 (99)
236 1u2h_A APEG-1, aortic preferen 99.6 4.5E-15 1.5E-19 74.1 7.8 68 1-68 19-96 (99)
237 1hzh_H IGG, immunoglobulin hea 99.6 3.7E-15 1.3E-19 92.1 8.8 115 1-116 263-399 (457)
238 2kdg_A Myotilin; immonoglobuli 99.6 5.2E-15 1.8E-19 74.0 7.8 68 1-68 19-96 (100)
239 3qp3_A Titin; I-SET IG-like, s 99.6 6.7E-15 2.3E-19 73.9 8.0 69 1-69 22-99 (103)
240 3mjg_X Beta-type platelet-deri 99.6 3.4E-15 1.2E-19 87.1 7.9 107 1-112 14-132 (289)
241 1x9q_A SCFV, 4M5.3 anti-fluore 99.6 8.7E-15 3E-19 84.9 9.4 111 1-111 29-190 (268)
242 3u83_A Poliovirus receptor-rel 99.6 6.1E-15 2.1E-19 87.5 8.9 108 1-111 28-173 (331)
243 1he7_A High affinity nerve gro 99.6 5.2E-15 1.8E-19 76.7 7.5 67 2-68 15-97 (126)
244 4acp_A IG gamma-1 chain C regi 99.6 2.7E-15 9.2E-20 86.0 6.9 116 1-116 38-174 (240)
245 2kkq_A Myotilin; unknown funct 99.6 9.7E-15 3.3E-19 75.0 8.4 69 1-69 29-108 (116)
246 2bk8_A Connectin, M1, titin he 99.6 1.7E-14 5.7E-19 71.8 8.8 68 1-68 15-92 (97)
247 1ow0_A IG alpha-1 chain C regi 99.6 4.3E-16 1.5E-20 87.8 3.2 114 2-117 19-152 (214)
248 3mtr_A N-CAM-1, NCAM-1, neural 99.6 2.9E-14 1E-18 80.2 10.7 108 1-113 32-156 (215)
249 2wqr_A IG epsilon chain C regi 99.6 6E-16 2E-20 91.8 3.9 110 3-112 25-155 (323)
250 3puc_A Titin; I-SET IG-like do 99.6 1.1E-14 3.7E-19 72.6 7.8 68 1-68 20-96 (99)
251 2e7c_A Myosin-binding protein 99.6 1.8E-14 6E-19 74.2 8.6 69 1-69 38-114 (118)
252 2dm3_A KIAA0992 protein, palla 99.6 2E-15 6.9E-20 76.7 5.0 70 1-70 23-102 (110)
253 1mq8_A ICAM-1, intercellular a 99.6 5.7E-16 1.9E-20 90.9 3.2 117 1-117 100-234 (291)
254 3shs_A HOC head outer capsid p 99.6 2.2E-13 7.4E-18 78.5 13.5 115 1-117 16-143 (304)
255 1wwb_X Protein (brain derived 99.6 1.6E-14 5.5E-19 72.7 8.1 67 2-68 16-96 (103)
256 3caf_A Fibroblast growth facto 99.6 5.6E-15 1.9E-19 73.9 6.3 67 1-67 22-98 (100)
257 1gxe_A Myosin binding protein 99.6 9E-15 3.1E-19 77.4 7.1 68 1-68 32-137 (139)
258 2ckn_A Basic fibroblast growth 99.6 1.6E-14 5.5E-19 71.6 7.7 66 1-67 23-93 (95)
259 1iga_A IGA1; immunoglobulin; N 99.6 8E-14 2.7E-18 86.6 12.3 112 1-113 15-168 (475)
260 3irg_B Obscurin-like protein 1 99.6 2.3E-14 8E-19 72.4 8.0 68 1-68 27-103 (107)
261 1ypz_F T-cell receptor gamma c 99.6 1.3E-14 4.3E-19 82.6 7.4 116 1-116 15-175 (230)
262 1nct_A Titin; cell adhesion, g 99.6 5.1E-15 1.8E-19 74.9 5.2 68 1-68 28-104 (106)
263 1fhg_A Telokin; immunoglobulin 99.6 2.7E-14 9.2E-19 76.7 8.2 69 1-69 55-133 (154)
264 1zvo_C Myeloma immunoglobulin 99.6 1.4E-13 4.7E-18 86.4 12.6 112 2-117 312-446 (512)
265 3irg_A Titin; IG-like, titin, 99.6 2.3E-14 7.9E-19 71.5 7.3 68 1-68 19-97 (100)
266 2lu7_A Obscurin-like protein 1 99.6 2.4E-14 8.2E-19 69.5 7.0 63 1-68 10-81 (84)
267 2cr3_A Basic fibroblast growth 99.6 2.4E-14 8.3E-19 71.5 7.2 66 1-67 17-87 (99)
268 3tv3_H PGT128 heavy chain, IG 99.6 2.3E-14 8E-19 82.0 8.0 114 1-114 14-182 (239)
269 3cx2_A Myosin-binding protein 99.6 2.4E-14 8.1E-19 72.6 7.2 68 1-68 18-106 (108)
270 1gl4_B Basement membrane-speci 99.6 6.5E-14 2.2E-18 69.7 8.6 68 1-68 24-96 (98)
271 3fku_X Neutralizing antibody F 99.6 7.2E-14 2.5E-18 81.6 10.0 109 1-110 14-177 (280)
272 4dkd_C Macrophage colony-stimu 99.6 3.5E-15 1.2E-19 87.1 4.3 107 1-115 18-132 (292)
273 3qhz_H Human monoclonal antibo 99.5 4.6E-14 1.6E-18 80.3 7.9 113 1-113 14-173 (232)
274 3s35_X Vascular endothelial gr 99.5 1.5E-14 5.2E-19 74.7 5.1 77 1-80 22-117 (122)
275 2edn_A Myosin-binding protein 99.5 1.6E-14 5.6E-19 74.1 4.9 69 1-69 26-115 (118)
276 2yuz_A Myosin-binding protein 99.5 8.3E-14 2.8E-18 69.8 7.0 65 1-69 21-94 (100)
277 3u2s_H PG9 heavy chain; greek 99.5 6E-14 2E-18 80.7 7.2 113 1-113 13-182 (248)
278 4hwu_A Fibroblast growth facto 99.5 1.5E-13 5E-18 68.1 7.5 66 1-68 15-85 (95)
279 2lvc_A Obscurin-like protein 1 99.5 1E-13 3.6E-18 68.3 6.8 55 1-56 20-83 (91)
280 1wwc_A Protein (NT-3 growth fa 99.5 1.5E-13 5E-18 70.7 6.9 66 3-68 21-99 (118)
281 3rbs_A Myomesin-1; immunoglobu 99.5 7.7E-14 2.6E-18 78.3 6.1 66 1-66 130-203 (207)
282 1x44_A Myosin-binding protein 99.5 4E-13 1.4E-17 67.5 8.2 64 1-69 21-95 (103)
283 3so5_A LIG-3, leucine-rich rep 99.5 4.1E-13 1.4E-17 68.0 6.8 59 1-59 24-101 (112)
284 1waa_A Titin; metal binding pr 99.4 7.9E-13 2.7E-17 65.3 7.3 55 1-56 19-82 (93)
285 2e6p_A Obscurin-like protein 1 99.4 3E-13 1E-17 68.0 5.8 55 1-56 24-87 (104)
286 1iam_A ICAM-1, CD54, intercell 99.4 6.9E-12 2.4E-16 69.1 11.5 112 1-117 13-132 (185)
287 3qr2_A Basigin; CD147, EMMPRIN 99.4 3.1E-13 1.1E-17 71.2 5.9 60 1-60 35-116 (137)
288 2dlt_A Myosin binding protein 99.4 6.3E-13 2.2E-17 67.1 6.7 65 1-68 22-95 (106)
289 3n9g_H FAB fragment of MAB CR4 99.4 2.2E-12 7.4E-17 73.4 9.6 108 1-108 14-164 (230)
290 2v5t_A NCAM2, N-CAM 2, neural 99.4 1E-12 3.5E-17 72.2 8.0 68 2-69 113-187 (189)
291 3r08_E T-cell surface glycopro 99.4 7.8E-14 2.7E-18 67.0 3.0 52 2-55 14-66 (82)
292 2r15_A Myomesin-1; sarcomeric 99.4 8.6E-13 2.9E-17 73.7 7.7 68 1-68 131-208 (212)
293 2nzi_A Titin; IG-domain, FNIII 99.4 3.9E-12 1.3E-16 74.7 10.7 69 2-70 119-197 (305)
294 3s97_C Contactin-1; carbonic a 99.4 1.8E-12 6E-17 71.8 8.6 68 1-68 127-199 (201)
295 3k0w_A Mucosa-associated lymph 99.4 1.4E-12 4.7E-17 73.5 8.3 59 1-59 132-190 (218)
296 1ypz_E T cell receptor delta, 99.4 4.2E-12 1.5E-16 71.2 10.1 106 1-116 15-160 (207)
297 2k1m_A Myosin-binding protein 99.4 3.9E-12 1.3E-16 62.9 8.9 52 1-53 22-82 (95)
298 2edf_A Obscurin; beta-sandwich 99.4 9E-13 3.1E-17 66.1 6.4 64 1-69 22-94 (103)
299 3m45_A Cell adhesion molecule 99.4 1.1E-12 3.9E-17 66.1 6.8 67 1-68 20-104 (108)
300 3rbg_A Cytotoxic and regulator 99.4 1.1E-12 3.8E-17 68.0 6.8 68 1-69 15-100 (124)
301 2cr6_A KIAA1556 protein, obscu 99.4 1.6E-12 5.6E-17 66.5 7.1 65 1-69 27-101 (115)
302 2v44_A NCAM2, neural cell adhe 99.4 1.8E-12 6.3E-17 71.3 7.8 69 1-69 110-186 (189)
303 2yuv_A Myosin-binding protein 99.4 5.3E-12 1.8E-16 63.0 8.7 63 1-68 22-93 (100)
304 1z9m_A GAPA225; nectin-like, I 99.4 1.7E-12 5.7E-17 69.0 7.2 68 1-69 52-137 (145)
305 2ny1_B T-cell surface glycopro 99.4 1.2E-12 4.2E-17 71.8 6.8 68 1-69 111-178 (184)
306 2cpc_A KIAA0657 protein; immun 99.4 5.7E-12 2E-16 64.1 8.7 54 1-55 27-89 (113)
307 1pd6_A Cardiac MYBP-C;, myosin 99.4 6.1E-12 2.1E-16 63.3 8.6 53 1-54 30-92 (104)
308 2wv3_A Neuroplastin; igcam, me 99.4 9E-12 3.1E-16 68.6 9.9 69 1-69 106-189 (190)
309 3sob_H Antibody heavy chain, l 99.4 5.8E-12 2E-16 72.7 9.2 108 1-108 37-190 (256)
310 1f97_A Junction adhesion molec 99.4 5.1E-12 1.7E-16 70.5 8.7 70 1-70 118-205 (212)
311 2dku_A KIAA1556 protein; beta- 99.4 1.1E-11 3.6E-16 62.2 9.1 64 1-69 22-94 (103)
312 2a38_A Titin; Z1Z2, structural 99.4 2.1E-12 7.3E-17 71.2 7.0 68 1-68 117-193 (194)
313 2eny_A Obscurin; beta-sandwich 99.4 5.4E-12 1.8E-16 63.5 7.8 65 1-69 22-96 (104)
314 2v9t_A Roundabout homolog 1; s 99.4 1.7E-12 5.9E-17 66.5 6.0 60 1-60 23-98 (117)
315 2jll_A NCAM2, neural cell adhe 99.4 1.6E-11 5.5E-16 74.3 11.1 109 1-113 114-239 (389)
316 2yd1_A Tyrosine-protein phosph 99.4 3.6E-12 1.2E-16 71.4 7.7 69 1-69 124-199 (212)
317 3iu4_H CHP3 FAB heavy chain; a 99.4 6.3E-12 2.2E-16 72.9 8.9 108 1-108 14-163 (263)
318 1zvo_C Myeloma immunoglobulin 99.4 2.6E-11 8.9E-16 76.2 12.1 114 2-116 150-341 (512)
319 2edk_A Myosin-binding protein 99.4 6E-13 2E-17 66.6 3.8 54 1-55 22-88 (101)
320 2dm7_A KIAA1556 protein; beta- 99.4 2.5E-11 8.4E-16 61.3 9.7 53 1-55 22-83 (108)
321 1epf_A NCAM, protein (neural c 99.4 3.4E-12 1.1E-16 70.3 6.9 68 1-68 114-189 (191)
322 3bn3_B ICAM-5, intercellular a 99.4 1.5E-11 5.2E-16 68.3 9.4 112 1-116 16-134 (196)
323 3lcy_A Titin; A-BAND, IG tande 99.4 4.4E-12 1.5E-16 70.0 7.3 68 1-68 117-194 (197)
324 2j8h_A Titin, connectin; cardi 99.3 3.9E-12 1.3E-16 70.4 6.8 67 2-68 119-195 (197)
325 3jz7_A MCAR, CAR, coxsackievir 99.3 1.1E-11 3.7E-16 69.2 8.6 68 1-68 135-210 (214)
326 2e7b_A Obscurin; IG-like domai 99.3 1.1E-11 3.9E-16 62.1 7.8 64 1-69 22-94 (103)
327 2edh_A Obscurin; structural ge 99.3 2.9E-11 9.9E-16 61.6 9.4 62 1-68 33-103 (113)
328 4gos_A V-SET domain-containing 99.3 1.2E-11 4E-16 64.3 7.9 68 1-68 19-118 (125)
329 2cry_A KIN of IRRE-like protei 99.3 1.6E-13 5.4E-18 71.0 0.5 68 1-68 27-111 (122)
330 2c5d_C AXL oncogene, tyrosine- 99.3 1.7E-11 5.7E-16 67.8 8.7 66 1-68 120-191 (195)
331 3grw_A Fibroblast growth facto 99.3 1.6E-11 5.6E-16 69.8 8.8 69 1-69 128-217 (241)
332 3f8u_B Tapasin; endoplasmic re 99.3 3.6E-11 1.2E-15 73.2 10.5 76 34-112 254-335 (401)
333 3sgj_C Human FCG3A receptor; r 99.3 2.6E-12 8.9E-17 71.9 5.2 56 1-56 102-159 (204)
334 2v9r_A Roundabout homolog 1; p 99.3 6.2E-12 2.1E-16 70.2 6.7 76 1-79 125-208 (212)
335 1f2q_A High affinity immunoglo 99.3 2.1E-11 7.1E-16 66.5 8.5 56 1-56 99-156 (176)
336 1b6u_A KIR2DL3, P58 killer cel 99.3 9.2E-12 3.1E-16 72.1 7.4 105 1-110 120-238 (257)
337 2yd6_A PTPRD protein; hydrolas 99.3 5.5E-12 1.9E-16 70.7 6.2 60 1-60 122-193 (212)
338 1nbq_A JAM, junctional adhesio 99.3 4E-12 1.4E-16 70.8 5.5 66 1-66 121-203 (209)
339 2ifg_A High affinity nerve gro 99.3 6.7E-12 2.3E-16 75.3 6.7 67 2-68 261-343 (347)
340 3c6l_A TCR 2W20 alpha chain; T 99.0 1.9E-13 6.4E-18 75.5 0.0 111 1-116 14-152 (185)
341 3ojm_B Fibroblast growth facto 99.3 1.8E-11 6.1E-16 69.1 8.1 69 1-69 132-220 (231)
342 2eo1_A OBSCN protein, cDNA FLJ 99.3 8.2E-12 2.8E-16 62.5 5.9 54 1-55 25-87 (102)
343 3rgv_A YAE62 TCR A chain; TCR, 99.3 2.7E-11 9.2E-16 67.6 8.4 112 1-117 14-154 (200)
344 3b5h_A Cervical EMMPRIN, HAB18 99.3 3.4E-11 1.2E-15 66.0 8.7 68 1-68 97-181 (184)
345 2va4_A NCAM2, N-CAM 2, neural 99.3 2E-11 6.7E-16 67.2 7.7 67 2-68 109-191 (192)
346 3mlr_H Human monoclonal anti-H 99.3 2.3E-11 7.9E-16 69.0 8.2 108 1-108 14-165 (226)
347 3u1s_H FAB PGT145 heavy chain; 99.3 2E-11 7E-16 70.9 8.1 108 1-108 37-204 (267)
348 2fbo_J V1V2;, variable region- 99.3 5.6E-12 1.9E-16 72.1 5.6 59 2-60 151-239 (250)
349 1hxm_A Gamma-delta T-cell rece 99.3 4.8E-11 1.6E-15 68.0 9.3 107 1-116 15-161 (229)
350 2iep_A Muscle-specific kinase 99.3 1.1E-11 3.8E-16 68.2 6.5 60 1-60 114-179 (192)
351 4fa8_A Secreted protein BARF1; 99.3 1.3E-11 4.5E-16 69.1 6.8 61 1-61 120-193 (203)
352 2id5_A Lingo-1, leucine rich r 99.3 9.9E-12 3.4E-16 77.3 6.8 68 1-68 399-475 (477)
353 3mbe_C I-AG7; T cell receptor, 99.3 3.7E-11 1.3E-15 68.3 8.5 111 1-117 15-155 (229)
354 4frw_A Poliovirus receptor-rel 99.3 7.8E-12 2.7E-16 69.8 5.8 69 2-70 133-211 (218)
355 3mj6_A Junctional adhesion mol 99.3 1.4E-11 4.8E-16 71.1 7.0 89 1-91 132-256 (268)
356 1rhf_A Tyrosine-protein kinase 99.3 3.9E-11 1.3E-15 65.6 8.4 58 1-60 112-172 (182)
357 1mq8_A ICAM-1, intercellular a 99.3 4.3E-10 1.5E-14 66.2 12.9 112 1-117 13-132 (291)
358 3zyj_A Leucine-rich repeat-con 99.3 1.8E-11 6.2E-16 75.6 7.1 69 1-70 355-433 (440)
359 2v5y_A Receptor-type tyrosine- 99.3 5.6E-11 1.9E-15 77.4 9.6 111 3-115 92-208 (731)
360 2x1w_L Vascular endothelial gr 99.3 1.8E-11 6.2E-16 68.7 6.5 69 1-69 119-206 (213)
361 4hwn_A FC receptor-like A; FCR 99.3 2.2E-11 7.4E-16 61.7 6.1 57 1-57 21-83 (108)
362 2vsd_A CHIR AB1; immune system 99.3 2E-11 6.7E-16 61.6 5.8 55 1-56 18-78 (105)
363 3r4d_A CEA-related cell adhesi 99.3 4.8E-11 1.6E-15 66.5 8.0 68 1-70 124-198 (208)
364 1fnl_A Low affinity immunoglob 99.3 1.4E-11 4.7E-16 67.2 5.6 57 1-57 102-160 (175)
365 3bp6_B Programmed cell death 1 99.3 2.1E-11 7.2E-16 67.8 6.4 68 2-69 118-192 (202)
366 3ry4_A Low affinity immunoglob 99.3 2E-11 6.8E-16 66.1 6.2 58 1-58 99-158 (170)
367 1jbj_A CD3 epsilon and gamma e 99.2 5.1E-12 1.8E-16 69.7 3.7 55 1-58 121-177 (186)
368 2vr9_A Roundabout 1, ROBO; imm 99.2 1.4E-11 4.7E-16 69.2 5.5 64 1-64 122-200 (217)
369 1sy6_A T-cell surface glycopro 99.2 5.1E-12 1.7E-16 70.7 3.5 56 2-59 128-192 (204)
370 4ei6_A Valpha1 XV19 type II na 99.2 2.9E-11 9.9E-16 67.8 6.5 112 1-117 16-159 (208)
371 2zg1_A Sialic acid-binding IG- 99.2 1.1E-10 3.7E-15 65.4 8.7 68 1-68 137-211 (214)
372 1ntl_A CRRY-IG; immunology, co 99.2 2.2E-10 7.6E-15 72.7 10.7 114 2-116 358-493 (551)
373 1zxq_A ICAM-2, intercellular a 99.2 3.6E-10 1.2E-14 62.5 10.1 112 1-117 16-134 (192)
374 1hng_A CD2; T lymphocyte adhes 99.2 4.9E-12 1.7E-16 69.3 2.7 59 3-63 111-169 (176)
375 1ugn_A LIR1, leukocyte immunog 99.2 1.1E-10 3.9E-15 64.7 8.2 57 1-58 114-181 (198)
376 2e6q_A Obscurin-like protein 1 99.2 3.5E-10 1.2E-14 57.6 9.0 64 1-69 22-104 (112)
377 1p6f_A NKP46, natural cytotoxi 99.2 6.7E-11 2.3E-15 67.9 7.1 56 1-57 115-175 (242)
378 3udw_C Poliovirus receptor; PV 99.2 8.1E-11 2.8E-15 60.1 6.6 68 1-68 14-114 (118)
379 1uct_A Immunoglobulin alpha FC 99.2 5.6E-11 1.9E-15 67.2 6.3 57 1-57 119-180 (218)
380 3q0h_A T cell immunoreceptor w 99.2 1E-10 3.5E-15 60.0 6.6 69 1-69 17-107 (117)
381 3gsn_A RA14 TCR alpha chain (T 99.2 2.9E-11 9.9E-16 67.4 4.9 112 1-117 14-154 (199)
382 3uto_A Twitchin; kinase, muscl 99.2 9.6E-11 3.3E-15 74.6 7.8 67 2-68 497-572 (573)
383 2d3v_A Leukocyte immunoglobuli 99.2 6.6E-11 2.3E-15 65.6 5.8 56 1-57 113-179 (196)
384 1oll_A NK receptor; immune sys 99.2 8.8E-11 3E-15 64.8 6.2 56 1-57 112-172 (188)
385 1jhl_L IGG1-kappa D11.15 FV (l 99.2 1.4E-10 4.6E-15 58.6 6.2 57 1-57 15-94 (108)
386 3tjh_C 42F3 alpha; IG MHC, ant 99.2 9.1E-11 3.1E-15 66.6 6.0 112 1-117 23-167 (226)
387 1olz_A Semaphorin 4D; developm 99.1 2.1E-10 7.1E-15 74.0 8.0 97 2-100 548-655 (663)
388 4gjt_B Poliovirus receptor-rel 99.1 5.4E-10 1.9E-14 57.8 8.3 68 1-68 14-115 (123)
389 1eaj_A Coxsackie virus and ade 99.1 9.9E-11 3.4E-15 60.3 5.3 68 1-68 19-123 (126)
390 2d9c_A Signal-regulatory prote 99.1 1.2E-09 4.1E-14 57.3 9.5 57 1-57 22-102 (136)
391 2oyp_A Hepatitis A virus cellu 99.1 1.6E-10 5.4E-15 58.3 5.7 69 1-69 8-107 (109)
392 3zyi_A Leucine-rich repeat-con 99.1 1E-10 3.5E-15 72.4 5.9 68 1-70 366-443 (452)
393 3khq_A B-cell antigen receptor 99.1 1.9E-10 6.5E-15 60.3 5.7 56 1-58 31-101 (133)
394 1pko_A Myelin oligodendrocyte 99.1 4.7E-10 1.6E-14 59.1 7.2 68 1-68 20-119 (139)
395 2qsq_A Carcinoembryonic antige 99.1 6.4E-10 2.2E-14 56.6 7.4 68 1-68 14-107 (111)
396 2gi7_A GPVI protein; IG-like d 99.1 2.1E-10 7.1E-15 63.1 6.1 57 1-58 107-168 (184)
397 2bnu_A TCR alpha chain, T-cell 99.1 1.4E-09 4.8E-14 60.9 9.3 101 1-106 14-147 (203)
398 4i0k_A CD276 antigen; immunogl 99.1 7.9E-10 2.7E-14 62.2 8.3 69 1-69 124-205 (222)
399 1mqk_L Antibody 7E2 FV fragmen 99.1 5E-10 1.7E-14 57.7 6.8 56 1-56 15-93 (120)
400 4f80_A Butyrophilin subfamily 99.1 1.9E-10 6.3E-15 65.1 5.6 67 2-68 133-211 (226)
401 3sbw_C Programmed cell death 1 99.1 3.2E-10 1.1E-14 63.7 6.5 69 1-69 130-210 (222)
402 2or8_A Hepatitis A virus cellu 99.1 7.7E-10 2.6E-14 56.4 7.2 70 1-70 11-109 (116)
403 1qfw_M FV, antibody (anti beta 99.1 7.1E-10 2.4E-14 56.0 6.4 56 1-56 15-93 (108)
404 2edo_A CD48 antigen; beta-sand 99.1 2.3E-10 7.9E-15 59.0 4.5 76 1-76 18-116 (121)
405 3d9a_L Light chain of hyhel10 99.1 1.7E-10 5.8E-15 64.5 4.3 59 2-60 127-203 (213)
406 3kgr_A LAIR-1, hlair1, leukocy 99.1 5.2E-10 1.8E-14 56.4 5.7 54 2-56 23-87 (106)
407 1ncn_A T lymphocyte activation 99.1 1E-09 3.5E-14 55.5 6.8 60 1-60 8-95 (110)
408 3p2t_A Leukocyte immunoglobuli 99.1 2.5E-10 8.5E-15 63.2 4.7 57 1-58 113-179 (196)
409 2ghw_B Anti-SARS SCFV antibody 99.1 1.1E-09 3.8E-14 62.6 7.5 57 1-57 149-228 (247)
410 1xau_A B- and T-lymphocyte att 99.1 1.5E-09 5.1E-14 54.3 6.9 60 1-60 28-105 (122)
411 1dr9_A B7-1 (CD80), T lymphocy 99.1 1.7E-09 5.7E-14 60.0 8.1 60 2-61 121-192 (201)
412 1lk3_L 9D7 light chain; antige 99.0 9.9E-10 3.4E-14 61.4 6.9 58 2-59 126-201 (210)
413 1neu_A Myelin P0 protein; stru 99.0 1.2E-09 4.2E-14 56.2 6.7 59 1-59 13-106 (124)
414 1xt5_A Variable region-contain 99.0 2.2E-09 7.6E-14 56.1 7.7 58 1-58 18-116 (135)
415 1zox_A CLM-1; IG-superfamily, 99.0 3.5E-09 1.2E-13 53.8 8.2 68 1-68 15-108 (113)
416 2ptt_A CD48 antigen; CD244, CD 99.0 1.6E-09 5.4E-14 54.8 6.7 57 1-57 17-96 (110)
417 2if7_A SLAM family member 6; N 99.0 1.6E-09 5.4E-14 60.1 7.1 55 4-60 126-182 (193)
418 1h5b_A Murine T cell receptor 99.0 1.7E-09 5.9E-14 55.0 6.6 57 1-58 15-95 (113)
419 1hnf_A CD2; T lymphocyte adhes 99.0 6.7E-10 2.3E-14 61.2 5.4 59 4-64 117-175 (182)
420 1lp9_E T-cell receptor alpha c 99.0 3.7E-09 1.3E-13 58.8 8.3 101 1-106 15-148 (194)
421 2xzc_L FAB A.17 light chain; i 99.0 2.2E-09 7.5E-14 60.2 7.5 59 2-60 129-205 (216)
422 1i1r_A GP130, interleukin-6 re 99.0 1.5E-08 5.1E-13 59.7 11.3 55 1-56 18-86 (303)
423 1vca_A VCAM-D1,2, human vascul 99.0 6.7E-10 2.3E-14 62.0 5.3 59 1-59 105-179 (202)
424 2ywz_A NEW antigen receptor va 99.0 1.3E-09 4.6E-14 55.3 5.9 55 1-55 14-87 (111)
425 2p1y_A Bispecific alpha/beta T 99.0 1.3E-09 4.4E-14 62.0 6.4 56 1-56 141-221 (238)
426 2e27_L Anti-ciguatoxin antibod 99.0 1.1E-09 3.8E-14 56.3 5.5 56 1-56 17-95 (119)
427 2eys_A NKT15; natural killer T 99.0 7.8E-09 2.7E-13 58.2 9.3 99 1-104 17-147 (210)
428 4esk_A LAIR-1, mlair1, leukocy 99.0 3.1E-09 1.1E-13 53.2 6.9 66 2-69 23-98 (102)
429 2q20_A VK1 O18/O8 germline lig 99.0 8E-10 2.7E-14 55.9 4.8 56 1-56 17-95 (109)
430 1f3r_B FV antibody fragment; I 99.0 4E-10 1.4E-14 65.0 4.1 57 1-57 153-232 (257)
431 3r0n_A Poliovirus receptor-rel 99.0 1.8E-09 6.3E-14 56.0 6.2 55 1-55 16-114 (128)
432 1i8k_A Epidermal growth factor 99.0 1.3E-09 4.3E-14 55.0 5.3 56 1-56 15-93 (107)
433 1pew_A JTO2, A lambda-6 type i 99.0 1.3E-09 4.3E-14 55.2 5.3 56 1-56 14-94 (109)
434 4ety_A LAIR-1, mlair1, leukocy 99.0 3.4E-09 1.2E-13 54.4 6.8 67 2-70 23-99 (118)
435 2jju_A Signal regulatory prote 99.0 3.9E-09 1.3E-13 54.8 7.1 56 1-56 17-96 (127)
436 1nkr_A P58-CL42 KIR; inhibitor 99.0 1.5E-09 5.1E-14 60.4 5.8 53 1-56 121-183 (201)
437 2nw2_A ELS4 TCR alpha chain; T 99.0 8.2E-09 2.8E-13 57.7 8.7 99 1-104 13-141 (200)
438 2yz1_A Tyrosine-protein phosph 99.0 2.6E-09 8.9E-14 54.8 6.2 57 1-57 21-101 (120)
439 3knb_B Obscurin-like protein 1 99.0 1E-09 3.5E-14 55.4 4.4 45 74-118 13-57 (107)
440 2dru_A Chimera of CD48 antigen 99.0 9.2E-10 3.1E-14 60.5 4.6 55 3-60 116-171 (180)
441 3esu_F Antibody 14B7* light ch 99.0 2E-09 6.7E-14 61.7 6.2 55 1-55 145-231 (250)
442 3mj8_L Stimulatory hamster ant 99.0 2.5E-10 8.5E-15 63.9 2.4 57 2-58 129-201 (213)
443 1nqb_A Single-chain antibody f 99.0 2.1E-09 7.1E-14 62.0 6.3 56 1-56 135-218 (256)
444 2pet_A Lutheran blood group gl 99.0 7.1E-10 2.4E-14 62.6 4.2 55 2-56 133-211 (231)
445 2q87_A CMRF35-H antigen; all-b 98.9 4.4E-09 1.5E-13 53.2 6.6 57 1-57 10-91 (110)
446 2c1o_A IGK-C protein; FAB frag 98.9 9.1E-10 3.1E-14 63.2 4.5 59 2-60 169-245 (254)
447 1nfd_E H57 FAB; complex (immun 98.9 1.3E-10 4.6E-15 65.0 1.0 58 2-59 128-201 (212)
448 3sob_L Antibody light chain; b 98.9 1.6E-09 5.6E-14 61.4 5.4 59 2-60 150-226 (237)
449 3knb_A Titin; IG-like, titin, 98.9 7.5E-10 2.6E-14 55.2 3.6 44 74-117 5-48 (100)
450 3umt_A SCFV heavy chain and li 98.9 2.3E-09 7.9E-14 61.7 5.9 57 1-57 152-231 (256)
451 2j6e_L IGM, FAB light chain; a 98.9 1.3E-09 4.4E-14 61.8 4.6 58 2-59 150-224 (234)
452 4ffy_L DENV1-E111 single chain 98.9 4E-09 1.4E-13 54.7 6.1 57 1-57 15-98 (126)
453 4f9l_D 20.1 anti-BTN3A1 antibo 98.9 1.1E-08 3.8E-13 58.5 8.2 111 1-111 15-170 (259)
454 1sq2_N Novel antigen receptor; 98.9 8.1E-09 2.8E-13 52.6 7.0 55 1-55 14-87 (113)
455 1ccz_A Protein (CD58); LFA-3, 98.9 2.4E-09 8.4E-14 58.3 5.3 54 6-61 109-162 (171)
456 3uzq_A Anti-dengue MAB 4E11; d 98.9 2.1E-09 7.3E-14 61.7 5.4 69 1-69 147-243 (253)
457 1qok_A MFE-23 recombinant anti 98.9 3.4E-09 1.2E-13 61.9 6.2 55 1-56 176-253 (282)
458 2coq_A NEW antigen receptor va 98.9 2.7E-09 9.3E-14 53.9 5.1 55 1-55 14-87 (108)
459 2d9q_B Granulocyte colony-stim 98.9 2.3E-08 7.7E-13 59.2 9.7 55 1-55 14-82 (313)
460 3tf7_C 42F3 MUT7 SCFV (42F3 al 98.9 7.8E-09 2.7E-13 59.5 7.5 57 1-58 151-234 (256)
461 1oga_D T-cell receptor alpha c 98.9 1.4E-08 4.9E-13 57.3 8.4 100 1-106 15-144 (215)
462 3ux9_B SCFV antibody; five hel 98.9 2.8E-09 9.7E-14 61.3 5.6 57 1-57 148-236 (256)
463 1q0x_L FAB 9B1, light chain; a 98.9 1.4E-09 4.7E-14 60.9 4.0 56 2-57 130-202 (212)
464 2jjs_C Leukocyte surface antig 98.9 1.6E-09 5.3E-14 56.0 3.8 68 2-69 16-114 (127)
465 1q9r_B S25-2 FAB (IGG1K) heavy 98.9 7.6E-10 2.6E-14 62.4 2.9 58 2-60 142-213 (222)
466 1c1e_H Catalytic antibody 1E9 98.9 2.4E-09 8.1E-14 60.2 4.9 57 2-59 139-209 (219)
467 1kgc_D T-cell receptor alpha c 98.9 3.2E-08 1.1E-12 55.5 9.3 101 1-106 13-146 (206)
468 3gkz_A Anti-methamphetamine si 98.9 5.4E-09 1.8E-13 60.2 6.4 57 1-57 155-235 (257)
469 3u6r_L Antibody 1:7 (light cha 98.9 6.6E-09 2.3E-13 55.1 6.2 69 1-69 14-105 (143)
470 3nl4_L Antigen binding fragmen 98.9 2.6E-09 8.8E-14 59.7 4.9 53 2-54 129-198 (213)
471 2aw2_A B and T lymphocyte atte 98.9 2.5E-08 8.7E-13 49.4 7.7 60 1-60 25-99 (120)
472 3d85_D IL-12B, interleukin-12 98.9 1.7E-08 5.8E-13 59.9 8.5 51 1-53 20-70 (306)
473 2q86_A Valpha14 TCR; INKT cell 98.9 1E-08 3.5E-13 58.4 7.2 101 1-106 15-144 (229)
474 1i3g_L Antibody FV fragment; a 98.9 5.9E-09 2E-13 52.9 5.6 56 1-56 18-96 (111)
475 1xiw_B T-cell surface glycopro 98.9 2.5E-09 8.6E-14 50.9 3.9 59 2-66 9-67 (79)
476 3eow_R Poliovirus receptor; im 98.9 4.9E-09 1.7E-13 59.0 5.7 66 2-67 130-209 (221)
477 3noi_A Natural cytotoxicity tr 98.9 7.8E-09 2.7E-13 53.1 6.0 56 1-56 21-103 (120)
478 3rrq_A Protein PD-1, programme 98.9 1.4E-08 4.9E-13 52.8 7.1 58 1-58 15-99 (129)
479 3moq_A NEW antigen receptor va 98.9 7.5E-09 2.6E-13 53.7 5.9 57 1-57 14-89 (126)
480 3pv7_A B7-H6, IG-like domain-c 98.9 5.6E-09 1.9E-13 59.7 5.8 68 2-69 133-223 (248)
481 3kg5_A B-cell antigen receptor 98.9 1.6E-08 5.4E-13 53.1 6.8 55 1-56 32-102 (134)
482 3auv_A SC-DSFV derived from th 98.9 1.2E-08 3.9E-13 59.5 7.0 56 1-56 148-235 (276)
483 3s96_B 3B5H10 FAB light chain; 98.9 2.5E-09 8.4E-14 60.0 3.9 57 2-58 136-208 (218)
484 3juy_B 3B3 single chain varian 98.9 1.1E-08 3.7E-13 58.9 6.6 57 1-57 163-243 (256)
485 1j05_L T84.66 antibody, anti-C 98.8 3.2E-09 1.1E-13 53.8 3.9 56 1-56 15-97 (111)
486 2ak4_D SB27 T cell receptor al 98.8 4.2E-08 1.4E-12 55.2 8.6 101 1-106 17-151 (211)
487 3bkj_L WO2 IGG2A FAB fragment 98.8 5.2E-09 1.8E-13 60.1 5.0 58 2-59 165-240 (252)
488 3tv3_L PGT128 light chain, IG 98.8 8.5E-10 2.9E-14 61.6 1.5 57 2-58 126-199 (211)
489 3bqu_C 3H6 FAB light chain; be 98.8 1.3E-09 4.6E-14 61.7 2.2 57 2-58 149-223 (233)
490 2yc1_B Single chain antibody f 98.8 2.9E-08 9.9E-13 52.8 7.2 56 1-56 30-108 (146)
491 3d9a_H Heavy chain of hyhel10 98.8 4.4E-09 1.5E-13 58.7 4.2 58 2-60 133-204 (210)
492 1dee_B IGM RF 2A2; FAB-IBP com 98.8 2.4E-08 8.3E-13 56.4 7.3 60 2-61 141-218 (223)
493 2v5y_A Receptor-type tyrosine- 98.8 1.4E-08 4.8E-13 66.3 7.0 94 1-98 178-284 (731)
494 2z35_A T-cell receptor alpha-c 98.8 2.5E-08 8.7E-13 50.6 6.6 54 1-54 14-92 (112)
495 3bia_X T-cell immunoglobulin a 98.8 4.8E-08 1.6E-12 49.8 7.6 56 1-56 10-95 (116)
496 3m8o_H Immunoglobulin A1 heavy 98.8 3.4E-08 1.2E-12 55.6 7.4 58 1-58 137-211 (221)
497 1n26_A IL-6 receptor alpha cha 98.8 2.8E-08 9.7E-13 59.2 7.4 66 1-69 20-92 (325)
498 2or7_A T-cell immunoglobulin a 98.8 1.5E-08 5E-13 51.6 5.3 68 1-70 11-108 (115)
499 1moe_A Anti-CEA MAB T84.66; an 98.8 3E-08 1E-12 56.4 7.0 56 1-56 133-220 (240)
500 1eeq_A Kappa-4 immunoglobulin 98.8 9.5E-09 3.2E-13 52.3 4.4 56 1-56 15-99 (114)
No 1
>2a38_A Titin; Z1Z2, structural protein; 2.00A {Homo sapiens} PDB: 1ya5_A 2f8v_A
Probab=99.91 E-value=2e-23 Score=115.70 Aligned_cols=117 Identities=24% Similarity=0.453 Sum_probs=94.0
Q ss_pred CCccEEEEEEeccCCCCeeEEeeCCccCCCCC-----------CCeEEEecCCCCCCeEEEEEEEcCCCCceeEeeEEEe
Q psy12725 1 MLALKFFTCKYEGNPVKTISWMKDGKPVPDHN-----------EPVFRIDSVRKEDKGMYQCVIRNEQESAQASGELKLG 69 (119)
Q Consensus 1 ~g~~~~l~c~~~~~~~~~v~w~~~~~~~~~~~-----------~~~l~~~~~~~~d~g~y~C~~~~~~~~~~~~~~~~v~ 69 (119)
.|+.+.|.|.+.+.|.+.+.|++++..+.... ...|.|.+++..|.|.|.|.+.+..+.......+.+.
T Consensus 19 ~G~~v~l~C~~~~~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~~~n~~~~~~~~~~l~v~ 98 (194)
T 2a38_A 19 EGSTATFEAHISGFPVPEVSWFRDGQVISTSTLPGVQISFSDGRAKLTIPAVTKANSGRYSLKATNGSGQATSTAELLVK 98 (194)
T ss_dssp TTSCEEEEEEEEEESCCEEEEEESSSBCCTTTSTTCEEEEETTEEEEEESSCCGGGCEEEEEEEEETTEEEEEEEEEEEE
T ss_pred CCCEEEEEEEEEecCCCEEEEEECCEEcccccCCceEEEeCCCEEEEEECCCCcccCEEEEEEEEcCCceEeEEEEEEEc
Confidence 48999999999988888999999988765431 3479999999999999999999887655555556654
Q ss_pred eecCCCeeeecCCccccCCCCcEEEEeEEccCCCCeEEEEECCEEccc
Q psy12725 70 GRFDPPVIKESFSDETLNPGPNYYFKCIASGNPTPEISWYLDGKKLVN 117 (119)
Q Consensus 70 ~~~~~~~~~~~~~~~~~~~g~~~~l~C~~~~~p~~~~~W~~~~~~~~~ 117 (119)
....+|.+...+....+..|+.+.|.|.+.+.|.+.+.|++++..+..
T Consensus 99 ~~~~~p~~~~~~~~~~~~~g~~~~l~C~~~g~p~~~v~W~~~~~~~~~ 146 (194)
T 2a38_A 99 AETAPPNFVQRLQSMTVRQGSQVRLQVRVTGIPTPVVKFYRDGAEIQS 146 (194)
T ss_dssp CCCEEEEEEECCCCEEECTTEEEEEEEEEEEESCCEEEEEETTEECCC
T ss_pred cCCCCCEEEeCCccEEEcCCCEEEEEEEEEEecCCeEEEEECCEECCC
Confidence 333456666656566788999999999999999999999999988754
No 2
>2yd6_A PTPRD protein; hydrolase; HET: FLC; 1.35A {Homo sapiens} PDB: 2yd7_A 2yd2_A 2yd3_A 2yd4_A* 2yd8_A* 2yd5_A* 3pxh_A
Probab=99.90 E-value=5.5e-22 Score=111.56 Aligned_cols=117 Identities=28% Similarity=0.485 Sum_probs=90.5
Q ss_pred CCccEEEEEEeccCCCCeeEEeeCCccCCCC----------CCCeEEEecC-CCCCCeEEEEEEEcCCCCceeEeeEEEe
Q psy12725 1 MLALKFFTCKYEGNPVKTISWMKDGKPVPDH----------NEPVFRIDSV-RKEDKGMYQCVIRNEQESAQASGELKLG 69 (119)
Q Consensus 1 ~g~~~~l~c~~~~~~~~~v~w~~~~~~~~~~----------~~~~l~~~~~-~~~d~g~y~C~~~~~~~~~~~~~~~~v~ 69 (119)
.|+.+.|.|.+.+.|.+.+.|++++..+... ....|.|.++ +..|.|.|.|.+.+..+.......+.+.
T Consensus 20 ~G~~v~L~C~~~g~p~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~~d~G~Y~C~a~n~~g~~~~~~~l~V~ 99 (212)
T 2yd6_A 20 SGGVASFICQATGDPRPKIVWNKKGKKVSNQRFEVIEFDDGSGSVLRIQPLRTPRDEAIYECVASNNVGEISVSTRLTVL 99 (212)
T ss_dssp TTSCEEEEEEEEEESCCEEEEEETTEECCCTTEEEEEEGGGTEEEEEECSCCTTTTCEEEEEEEEETTEEEEEEEEEEEE
T ss_pred cCCeEEEEEEEeeCCCCEEEEEECCcCCCCCceeEEEEcCCCceEEEEeccCCCCCCeEEEEEEEcCCCcEEEEEEEEEe
Confidence 4899999999998898999999999877542 2346899999 4999999999999987655445555554
Q ss_pred ee----cCCCeeeecCCccccCCCCcEEEEeEEccCCCCeEEEEECCEEccc
Q psy12725 70 GR----FDPPVIKESFSDETLNPGPNYYFKCIASGNPTPEISWYLDGKKLVN 117 (119)
Q Consensus 70 ~~----~~~~~~~~~~~~~~~~~g~~~~l~C~~~~~p~~~~~W~~~~~~~~~ 117 (119)
.. ...|.+...+....+..|+.+.|.|.+.+.|.+.+.|++++..+..
T Consensus 100 ~~~~~~~~~p~~~~~~~~~~~~~g~~v~l~C~~~g~p~p~v~W~~~g~~l~~ 151 (212)
T 2yd6_A 100 REDQIPRGFPTIDMGPQLKVVERTRTATMLCAASGNPDPEITWFKDFLPVDT 151 (212)
T ss_dssp CGGGCCTTCCEEEECCCCEEEETTSCEEEEEEEECSSCCEEEEEETTEEC--
T ss_pred ccCccCCCcceeecCCcceeEecCCCEEEEEEecCCCCCeEEEEECCccccC
Confidence 31 1125555555555677899999999999999999999999988764
No 3
>3k0w_A Mucosa-associated lymphoid tissue lymphoma translocation protein 1, isoform 2; hydrolase, immunoglobulin domain, nucleus, protease; 2.80A {Homo sapiens}
Probab=99.90 E-value=1.2e-21 Score=110.67 Aligned_cols=117 Identities=22% Similarity=0.458 Sum_probs=93.8
Q ss_pred CCccEEEEEEeccCCCCeeEEeeCCccCCCCCCCeEEEecCCCCCCeEEEEEEEcCCCCc-eeEeeEEEeeec-------
Q psy12725 1 MLALKFFTCKYEGNPVKTISWMKDGKPVPDHNEPVFRIDSVRKEDKGMYQCVIRNEQESA-QASGELKLGGRF------- 72 (119)
Q Consensus 1 ~g~~~~l~c~~~~~~~~~v~w~~~~~~~~~~~~~~l~~~~~~~~d~g~y~C~~~~~~~~~-~~~~~~~v~~~~------- 72 (119)
.|+.+.|.|.+.+.|.+.+.|++++..+.......|.|.+++..|.|.|.|.+.+..+.. .....+.+....
T Consensus 32 ~G~~v~L~C~~~~~p~~~v~W~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~~~n~~~~~~s~~~~l~V~~~~~~~~~~~ 111 (218)
T 3k0w_A 32 AGQFVKLCCRATGHPFVQYQWFKMNKEIPNGNTSELIFNAVHVKDAGFYVCRVNNNFTFEFSQWSQLDVCDIPESFQRSV 111 (218)
T ss_dssp TTSBEEEECEETTTTSSEEEEEETTEECTTCCSSEEEETTCCGGGCEEEEEEEECTTCCEECCCEEEEEECCCGGGCTTC
T ss_pred CCCcEEEEeeecCCCCCEEEEEECCEECCCCCCCEEEEccCChhhCeEeEEEEEcCCCCceeeEEEEEEEccCccccccc
Confidence 489999999999988899999999998877778899999999999999999999875432 223344443210
Q ss_pred -----CCCeeeecCCccccCCCCcEEEEeEEccCCCCeEEEEECCEEccc
Q psy12725 73 -----DPPVIKESFSDETLNPGPNYYFKCIASGNPTPEISWYLDGKKLVN 117 (119)
Q Consensus 73 -----~~~~~~~~~~~~~~~~g~~~~l~C~~~~~p~~~~~W~~~~~~~~~ 117 (119)
.+|.+...+....+..|+.+.|.|.+.+.|.+.+.|++++..+..
T Consensus 112 ~~~~~~~p~~~~~~~~~~v~~G~~v~L~C~~~g~p~~~v~W~~~~~~~~~ 161 (218)
T 3k0w_A 112 DGVSESKLQICVEPTSQKLMPGSTLVLQCVAVGSPIPHYQWFKNELPLTH 161 (218)
T ss_dssp CSBCCSSCEEEECCCCEEECTTCCEEEECEEEBSSCCEEEEEETTEECTT
T ss_pred ccccCCCceEEECCCceeecCCCcEEEEEEecccCCCeEEEEECCEECCC
Confidence 114555556566788999999999999999999999999998754
No 4
>4fa8_A Secreted protein BARF1; immunoglobulin-like domains, 4-helix bundle fold, viral PROT cytokine complex; HET: NAG BMA; 2.20A {Human herpesvirus 4} PDB: 2ch8_A* 3uez_A* 4adf_A* 4adq_A*
Probab=99.89 E-value=2.8e-23 Score=116.41 Aligned_cols=110 Identities=15% Similarity=0.252 Sum_probs=85.0
Q ss_pred CCccEEEEEE---eccCCCCeeEEeeCCccCCC--------------------------CCCCeEEEecCCCCCCeEEEE
Q psy12725 1 MLALKFFTCK---YEGNPVKTISWMKDGKPVPD--------------------------HNEPVFRIDSVRKEDKGMYQC 51 (119)
Q Consensus 1 ~g~~~~l~c~---~~~~~~~~v~w~~~~~~~~~--------------------------~~~~~l~~~~~~~~d~g~y~C 51 (119)
+|+.+.|.|. +.+.|.+.|.|+|++..... .....|.|.+++.+|+|.|.|
T Consensus 7 ~Ge~v~L~C~~~~v~~~p~~~V~W~k~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C 86 (203)
T 4fa8_A 7 LGERVTLTSYWRRVSLGPEIEVSWFKLGPGEEQVLIGRMHHDVIFIEWPFRGFFDIHRSANTFFLVVTAANISHDGNYLC 86 (203)
T ss_dssp TTCCEEEEEECSSTTCSTTSEEEEEEEETTTEEEEEEEEETTEEEECGGGBTTEEEEEETTEEEEEESSCCGGGCEEEEE
T ss_pred cCCCEEEEeeeeccCCCCCcEEEEEEcCCCcceEEEEecCCceEEeeccccceEEEEEcCCEEEEEEccCCHHHCeEEEE
Confidence 5999999996 45668899999997643210 123469999999999999999
Q ss_pred EEEcCCCCceeEeeEEEeeecCCCeeeecCCccccCCCCcEEEEeEEccCCCCeEEEEECCE
Q psy12725 52 VIRNEQESAQASGELKLGGRFDPPVIKESFSDETLNPGPNYYFKCIASGNPTPEISWYLDGK 113 (119)
Q Consensus 52 ~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~g~~~~l~C~~~~~p~~~~~W~~~~~ 113 (119)
.+.+..+.......+.+. .||.+...+....+.+|+.+.|.|.+.|.|.|.+.|++++.
T Consensus 87 ~a~n~~g~~~~~~~l~V~---~p~~~~~~~~~~~v~~g~~~~l~C~~~G~P~P~v~W~~~~~ 145 (203)
T 4fa8_A 87 RMKLGETEVTKQEHLSVV---KPLTLSVHSERSQFPDFSVLTVTCTVNAFPHPHVQWLMPEG 145 (203)
T ss_dssp EEEETTEEEEEEEEEEEE---EEEEEEEEEEECCSSCSCCEEEEEEEEEESCCEEEECCC--
T ss_pred EEEcCCCcEEEEEEEEec---CCceeeecceeEEEcCCCEEEEEEEcCCCCCCEEEEEECCe
Confidence 999987665555555553 35666666666678899999999999999999999987654
No 5
>2c5d_C AXL oncogene, tyrosine-protein kinase receptor UFO; signaling protein/receptor, growth regulation/complex, vitamin K-dependent protein; HET: NAG; 3.3A {Homo sapiens}
Probab=99.89 E-value=6.2e-22 Score=109.93 Aligned_cols=115 Identities=23% Similarity=0.418 Sum_probs=90.9
Q ss_pred CCccEEEEEEec-cCCCCeeEEeeCCccCCCCC------------------CCeEEEecCCCCCCeEEEEEEEcCCCCce
Q psy12725 1 MLALKFFTCKYE-GNPVKTISWMKDGKPVPDHN------------------EPVFRIDSVRKEDKGMYQCVIRNEQESAQ 61 (119)
Q Consensus 1 ~g~~~~l~c~~~-~~~~~~v~w~~~~~~~~~~~------------------~~~l~~~~~~~~d~g~y~C~~~~~~~~~~ 61 (119)
.|+.+.|.|.+. +.|.+.+.|++++..+.... ...|.|.+++..|.|.|.|.+.+..+...
T Consensus 16 ~G~~v~l~C~~~~~~p~~~v~W~~~g~~l~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~~~~~~~~~~ 95 (195)
T 2c5d_C 16 RGLTGTLRCQLQVQGEPPEVHWLRDGQILELADSTQTQVPLGEDEQDDWIVVSQLRITSLQLSDTGQYQCLVFLGHQTFV 95 (195)
T ss_dssp TTCCEEEEEEEEEESSCCCCEEEETTEECCSCEEEEEEEECSSSTTSEEEEEEEEEESSCCSTTCEEEEEEEEETTEEEE
T ss_pred cCCcEEEecccccCCCCcEEEEEECCEEcccCCCCceEEEEccccccceeeccEEEEEeccccCCcEEEEEEEeCCCcee
Confidence 489999999998 88889999999998775431 25799999999999999999998754321
Q ss_pred eEeeEEEeeecCCCeeeecCCccccCCCCcEEEEeEEccCCCC-eEEEEECCEEccc
Q psy12725 62 ASGELKLGGRFDPPVIKESFSDETLNPGPNYYFKCIASGNPTP-EISWYLDGKKLVN 117 (119)
Q Consensus 62 ~~~~~~v~~~~~~~~~~~~~~~~~~~~g~~~~l~C~~~~~p~~-~~~W~~~~~~~~~ 117 (119)
+..+.+.+ ..+|.+...+....+.+|+.+.|.|.+.+.|.| .+.|++++..+..
T Consensus 96 -~~~~~l~V-~~~p~~~~~~~~~~~~~g~~~~l~C~~~g~p~p~~v~W~~~~~~~~~ 150 (195)
T 2c5d_C 96 -SQPGYVGL-EGLPYFLEEPEDRTVAANTPFNLSCQAQGPPEPVDLLWLQDAVPLAT 150 (195)
T ss_dssp -CCCEEEEE-CCSCEEEECCCCEEECTTCCEEEEEEEECSSCCCEEEEEESSCBSSS
T ss_pred -cccEEEEE-ecCCeEEcCCCcEEEcCCCEEEEEeECCCCCCCCEEEEEECCEeccC
Confidence 22233333 246777766666678899999999999999999 9999999987764
No 6
>2yd1_A Tyrosine-protein phosphatase LAR; hydrolase; 1.80A {Drosophila melanogaster} PDB: 3pxj_A
Probab=99.89 E-value=2.6e-21 Score=108.72 Aligned_cols=117 Identities=30% Similarity=0.527 Sum_probs=91.9
Q ss_pred CCccEEEEEEeccCCCCeeEEeeCCccCCCCC-----------CCeEEEecCCC-CCCeEEEEEEEcCCCC-ceeEeeEE
Q psy12725 1 MLALKFFTCKYEGNPVKTISWMKDGKPVPDHN-----------EPVFRIDSVRK-EDKGMYQCVIRNEQES-AQASGELK 67 (119)
Q Consensus 1 ~g~~~~l~c~~~~~~~~~v~w~~~~~~~~~~~-----------~~~l~~~~~~~-~d~g~y~C~~~~~~~~-~~~~~~~~ 67 (119)
.|+.+.|.|.+.+.|.+.+.|++++..+.... ...|.|.+++. .|.|.|.|.+.+..+. ......+.
T Consensus 20 ~G~~v~l~C~~~g~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~~d~G~Y~C~~~n~~g~~~~~~~~l~ 99 (212)
T 2yd1_A 20 VGGVASFYCAARGDPPPSIVWRKNGKKVSGTQSRYTVLEQPGGISILRIEPVRAGRDDAPYECVAENGVGDAVSADATLT 99 (212)
T ss_dssp TTSCEEEEEEEECSSCCEEEEEETTEECCTTSTTEEEEEETTTEEEEEESSCCTTTTCSEEEEEEECSSSCEEEEEEEEE
T ss_pred cCCEEEEEEEEccCCCCeEEEEECCEECCCCcceeEEEEcCCCeEEEEEEecCCCCcCceEEEEEEeCCCCeEEeeEEEE
Confidence 48999999999998989999999998775211 14789999999 9999999999998765 44455555
Q ss_pred Eeeec----CCCeeeecCCccccCCCCcEEEEeEEccCCCCeEEEEECCEEccc
Q psy12725 68 LGGRF----DPPVIKESFSDETLNPGPNYYFKCIASGNPTPEISWYLDGKKLVN 117 (119)
Q Consensus 68 v~~~~----~~~~~~~~~~~~~~~~g~~~~l~C~~~~~p~~~~~W~~~~~~~~~ 117 (119)
+.... ..|.+...+....+..|+.+.|.|.+.+.|.+.+.|++++..+..
T Consensus 100 V~~~~~~~~~~p~~~~~~~~~~~~~g~~v~l~C~~~g~p~p~i~W~~~~~~~~~ 153 (212)
T 2yd1_A 100 IYEGDKTPAGFPVITQGPGTRVIEVGHTVLMTCKAIGNPTPNIYWIKNQTKVDM 153 (212)
T ss_dssp EECTTCSCTTCCEEEECCCCEEEETTCCEEECCEEECSSCCEEEEEETTEECCT
T ss_pred EecccCCCCCCCeeEeCCCceEeecCCeEEEEEEeccCCCCeEEEEECCeEccc
Confidence 54311 125666655556678899999999999999999999999988764
No 7
>2wv3_A Neuroplastin; igcam, membrane, glycoprotein, cell membrane, cell adhesion, transmembrane, disulfide bond, alternative splicing; HET: NAG; 1.95A {Rattus norvegicus}
Probab=99.88 E-value=2.5e-21 Score=107.18 Aligned_cols=111 Identities=24% Similarity=0.430 Sum_probs=90.1
Q ss_pred CccEEEEEEeccCCC--CeeEEeeCCccCCCC----CCCeEEEecCCCCCCeEEEEEEEcCCCCceeEeeEEEeeecCCC
Q psy12725 2 LALKFFTCKYEGNPV--KTISWMKDGKPVPDH----NEPVFRIDSVRKEDKGMYQCVIRNEQESAQASGELKLGGRFDPP 75 (119)
Q Consensus 2 g~~~~l~c~~~~~~~--~~v~w~~~~~~~~~~----~~~~l~~~~~~~~d~g~y~C~~~~~~~~~~~~~~~~v~~~~~~~ 75 (119)
|+.+.|.|.+.+.+. +.+.|++++..+... ....|.|.+++..|.|.|.|.+.+. +.......+.+. .+|
T Consensus 18 G~~v~l~C~~~~~~~~~~~v~W~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~~~n~-~~~~~~~~l~V~---~~p 93 (190)
T 2wv3_A 18 LLPVTLQCNLTSSSHTLMYSYWTKNGVELTATRKNASNMEYRINKPRAEDSGEYHCVYHFV-SAPKANATIEVK---AAP 93 (190)
T ss_dssp SSCEEEEEEEEECSSCEEEEEEEETTEECTTCCBCCSEEEEEESSCCGGGCEEEEEEEEET-TEEEEEEEEEEE---CCC
T ss_pred CceEEEEEEeccCCCCceEEEEEECCEECcccceEeccEEEEEecCCcccCEEEEEEEEeC-CcccccEEEEEe---cCC
Confidence 899999999988776 789999999877543 2357999999999999999999987 444444444443 467
Q ss_pred eeeecCCccccCCCCcEEEEeEEccCCCCeEEEEE--CCEEcc
Q psy12725 76 VIKESFSDETLNPGPNYYFKCIASGNPTPEISWYL--DGKKLV 116 (119)
Q Consensus 76 ~~~~~~~~~~~~~g~~~~l~C~~~~~p~~~~~W~~--~~~~~~ 116 (119)
.+...+....+..|+.+.|.|.+.+.|.+.+.|++ ++..+.
T Consensus 94 ~~~~~~~~~~~~~g~~v~l~C~~~g~p~p~i~W~~~~~g~~~~ 136 (190)
T 2wv3_A 94 DITGHKRSENKNEGQDAMMYCKSVGYPHPEWMWRKKENGVFEE 136 (190)
T ss_dssp EEEEECSEEEEETTSCEEEEEEEECSSCCEEEEEEEETTEEEE
T ss_pred cccccCCcceeeCCCcEEEEEEeCccCCCceEEEEcCCCceee
Confidence 77766666678899999999999999999999999 777653
No 8
>3b43_A Titin; I-SET IG fold, extended poly-IG filament, elastic FIL structural protein; 3.30A {Oryctolagus cuniculus}
Probab=99.88 E-value=1.5e-21 Score=123.32 Aligned_cols=117 Identities=26% Similarity=0.466 Sum_probs=93.7
Q ss_pred CCccEEEEEEeccCCCCeeEEeeCCccCCCC---------CCCeEEEecCCCCCCeEEEEEEEcCCCCceeEeeEEEeee
Q psy12725 1 MLALKFFTCKYEGNPVKTISWMKDGKPVPDH---------NEPVFRIDSVRKEDKGMYQCVIRNEQESAQASGELKLGGR 71 (119)
Q Consensus 1 ~g~~~~l~c~~~~~~~~~v~w~~~~~~~~~~---------~~~~l~~~~~~~~d~g~y~C~~~~~~~~~~~~~~~~v~~~ 71 (119)
.|+.+.|.|.+.+.|.+.|.|||++..+... ....|.|.+++.+|.|.|.|.+.|..+.......+.+...
T Consensus 19 ~G~~v~L~C~~~g~p~~~v~W~k~g~~l~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~N~~g~~~~~~~l~v~~~ 98 (570)
T 3b43_A 19 IGEPITLQCKVDGTPEIRIAWYKEHTKLRSAPAYKMQFKNNVASLVINKVDHSDVGEYTCKAENSVGAVASSAVLVIKER 98 (570)
T ss_dssp TTSCEEEEEEEESSSSCEEEEECSSSBCCCCSSEEEECCTTEEEEEESSCCGGGCEEEEEEEEETTEEEEEEEEEEECCC
T ss_pred CCCEEEEEEEEccCCCCEEEEEECCEEccCCCCEEEEEECCEEEEEEccCChhhCEEEEEEEEeCCceEEEEEEEEECCC
Confidence 3899999999999999999999999877432 2256899999999999999999998765555555555432
Q ss_pred cCCCeeeecCCccccCCCCcEEEEeEEccCCCCeEEEEECCEEccc
Q psy12725 72 FDPPVIKESFSDETLNPGPNYYFKCIASGNPTPEISWYLDGKKLVN 117 (119)
Q Consensus 72 ~~~~~~~~~~~~~~~~~g~~~~l~C~~~~~p~~~~~W~~~~~~~~~ 117 (119)
..+|.+...+.......|+.+.|.|.+.+.|++.+.|++||..+..
T Consensus 99 ~~~p~~~~~~~~~~~~~G~~v~l~C~~~g~p~~~v~W~k~g~~l~~ 144 (570)
T 3b43_A 99 KLPPSFARKLKDVHETLGFPVAFECRINGSEPLQVSWYKDGELLKD 144 (570)
T ss_dssp CCCCEESSCCCCEEEETTSCEEEEEEEESSSSCEEEEEETTEECCC
T ss_pred CCCCcccccCCCeEecCCCeEEEEEEEccCCCCEEEEEECCEECcC
Confidence 3456666555555667899999999999999999999999998764
No 9
>1rhf_A Tyrosine-protein kinase receptor TYRO3; AXL/TYRO3 family, cellular adhesion, ligand-independent DIME mutational analysis, transferase; HET: EPE; 1.96A {Homo sapiens} SCOP: b.1.1.1 b.1.1.4
Probab=99.88 E-value=2.7e-21 Score=106.26 Aligned_cols=114 Identities=25% Similarity=0.452 Sum_probs=91.3
Q ss_pred CCccEEEEEEeccCCCCeeEEeeCCccCCCCC-----------CCeEEEecCCCCCCeEEEEEEEcCCCCc-eeEeeEEE
Q psy12725 1 MLALKFFTCKYEGNPVKTISWMKDGKPVPDHN-----------EPVFRIDSVRKEDKGMYQCVIRNEQESA-QASGELKL 68 (119)
Q Consensus 1 ~g~~~~l~c~~~~~~~~~v~w~~~~~~~~~~~-----------~~~l~~~~~~~~d~g~y~C~~~~~~~~~-~~~~~~~v 68 (119)
.|+.+.|.|.+.+.|.+.+.|++++..+.... ...|.|.+++..|.|.|.|.+.+..+.. .....+.+
T Consensus 16 ~G~~v~l~C~~~~~p~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~~~~~~~~~~~~~~~l~V 95 (182)
T 1rhf_A 16 QGQPVKLNCSVEGMEEPDIQWVKDGAVVQNLDQLYIPVSEQHWIGFLSLKSVERSDAGRYWCQVEDGGETEISQPVWLTV 95 (182)
T ss_dssp TTCCEEEEEEEESCSSCCEEEEETTEECCSSEEEEEEEETTEEEEEEEESSCCGGGCEEEEEEESSCTTCEECCCEEEEE
T ss_pred CCCcEEEEEEEeCCCCCeEEEEECCeecCCCCceEEEecCCCceEEEEEeecCcccCeEEEEEEEcCCCcEEEEEEEEEE
Confidence 48999999999988888999999998775431 2578899999999999999999874432 22344444
Q ss_pred eeecCCCeeeecCCccccCCCCcEEEEeEEccCCCC-eEEEEECCEEccc
Q psy12725 69 GGRFDPPVIKESFSDETLNPGPNYYFKCIASGNPTP-EISWYLDGKKLVN 117 (119)
Q Consensus 69 ~~~~~~~~~~~~~~~~~~~~g~~~~l~C~~~~~p~~-~~~W~~~~~~~~~ 117 (119)
. .+|.+...+....+..|+.+.|.|.+.+.|.| .+.|++++..+..
T Consensus 96 ~---~~p~~~~~~~~~~~~~g~~~~l~C~~~g~p~p~~v~W~~~~~~~~~ 142 (182)
T 1rhf_A 96 E---GVPFFTVEPKDLAVPPNAPFQLSCEAVGPPEPVTIVWWRGTTKIGG 142 (182)
T ss_dssp E---CSCEEEECCCCEEECTTCCEEEEEEEECSSSCCEEEEEETTEECSC
T ss_pred e---cCCeEEecCcceEecCCCEEEEEeEecCCCCCCEEEEEcCCeECCC
Confidence 2 46777776666678899999999999999998 9999999988754
No 10
>2rik_A Titin; I-SET IG fold, poly-IG linear array, structural protein; 1.60A {Oryctolagus cuniculus} PDB: 2rjm_A
Probab=99.88 E-value=5.4e-21 Score=111.38 Aligned_cols=114 Identities=26% Similarity=0.495 Sum_probs=93.2
Q ss_pred CCccEEEEEEeccCCCCeeEEeeCCccCCCCC---------CCeEEEecCCCCCCeEEEEEEEcCCCCceeEeeEEEeee
Q psy12725 1 MLALKFFTCKYEGNPVKTISWMKDGKPVPDHN---------EPVFRIDSVRKEDKGMYQCVIRNEQESAQASGELKLGGR 71 (119)
Q Consensus 1 ~g~~~~l~c~~~~~~~~~v~w~~~~~~~~~~~---------~~~l~~~~~~~~d~g~y~C~~~~~~~~~~~~~~~~v~~~ 71 (119)
.|+.+.|.|.+.+.|.+.+.|++++..+.... ...|.|.+++..|.|.|.|.+.+..+.......+.+.
T Consensus 113 ~g~~~~l~C~~~g~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~l~V~-- 190 (284)
T 2rik_A 113 QDEHTRYECKIGGSPEIKVLWYKDETEIQESSKFRMSFVESVAVLEMYNLSVEDSGDYTCEAHNAAGSASSSTSLKVK-- 190 (284)
T ss_dssp TTCCEEEEEEEESSSCCEEEEEETTEECCCSSSEEEEEETTEEEEEECSCCGGGCEEEEEEEECSSCEEEEEEEEEEE--
T ss_pred CCceEEEEEEEeeeCCCEEEEEECCEECcCCCcEEEEEcCCEEEEEECCCCcccCEEEEEEEEcCCCceeEEEEEEEe--
Confidence 37899999999998999999999998775432 3568899999999999999999987665555555553
Q ss_pred cCCCeeeecCCccccCCCCcEEEEeEEccCCCCeEEEEECCEEccc
Q psy12725 72 FDPPVIKESFSDETLNPGPNYYFKCIASGNPTPEISWYLDGKKLVN 117 (119)
Q Consensus 72 ~~~~~~~~~~~~~~~~~g~~~~l~C~~~~~p~~~~~W~~~~~~~~~ 117 (119)
.+|.+...+....+..|+.+.|.|.+.+.|.+.+.|++++..+..
T Consensus 191 -~~p~~~~~~~~~~~~~g~~v~l~C~~~g~p~~~v~W~~~~~~~~~ 235 (284)
T 2rik_A 191 -EPPVFRKKPHPVETLKGADVHLECELQGTPPFQVSWHKDKRELRS 235 (284)
T ss_dssp -CCCBCCSCCCCEEECTTCCEEEEEECBSSSCCEEEEEETTEEECB
T ss_pred -cCCcceeCCCcceecCCCeEEEEEEEEecCCCEEEEEECCEECcC
Confidence 466666666566678999999999999999999999999988764
No 11
>2j8h_A Titin, connectin; cardiomyopathy, nuclear protein, serine/threonine-protein KI LIMB-girdle muscular dystrophy, phosphorylation; 1.99A {Homo sapiens} PDB: 2j8o_A 2ill_A
Probab=99.88 E-value=2.6e-21 Score=107.50 Aligned_cols=117 Identities=23% Similarity=0.355 Sum_probs=87.6
Q ss_pred CCccEEEEEEeccCCCCeeEEeeCCccCCCCC---------C--CeEEEecCCCCCCeEEEEEEEcCCCCceeEeeEEEe
Q psy12725 1 MLALKFFTCKYEGNPVKTISWMKDGKPVPDHN---------E--PVFRIDSVRKEDKGMYQCVIRNEQESAQASGELKLG 69 (119)
Q Consensus 1 ~g~~~~l~c~~~~~~~~~v~w~~~~~~~~~~~---------~--~~l~~~~~~~~d~g~y~C~~~~~~~~~~~~~~~~v~ 69 (119)
.|+.+.|.|.+.+.|.+.+.|++++..+.... . ..|.|.+++..|.|.|.|.+.+..+.......+.+.
T Consensus 18 ~G~~v~l~C~~~~~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~~~n~~g~~~~~~~l~V~ 97 (197)
T 2j8h_A 18 YQSNATLVCKVTGHPKPIVKWYRQGKEIIADGLKYRIQEFKGGYHQLIIASVTDDDATVYQVRATNQGGSVSGTASLEVE 97 (197)
T ss_dssp TTSCEEEEEEEECSSCCEEEEEETTEECCCCSSSEEEEEETTTEEEEEECSCCGGGCSEEEEEEEETTEEEEEEEEEEEE
T ss_pred CCCEEEEEEEEeecCCCEEEEEECCEECccCCCcEEEEEcCCCEEEEEECcCCHHhCEEEEEEEEECCCceeEEEEEEEc
Confidence 48999999999998889999999988765321 1 289999999999999999999886555445555554
Q ss_pred ee--cCCCeeeecCCccccCCCCcEEEEeEEccCCCCeEEEEECCEEccc
Q psy12725 70 GR--FDPPVIKESFSDETLNPGPNYYFKCIASGNPTPEISWYLDGKKLVN 117 (119)
Q Consensus 70 ~~--~~~~~~~~~~~~~~~~~g~~~~l~C~~~~~p~~~~~W~~~~~~~~~ 117 (119)
.. ...|.....+....+..|+.+.|.|.+.+.|.+.+.|++++..+..
T Consensus 98 ~~p~~~~~~~~~~~~~~~~~~g~~~~l~C~~~g~p~p~i~W~~~~~~~~~ 147 (197)
T 2j8h_A 98 VPAKIHLPKTLEGMGAVHALRGEVVSIKIPFSGKPDPVITWQKGQDLIDN 147 (197)
T ss_dssp EEEEECCSSCBTTBEEEEEETTCCCEEEEEEEEESCCEEEEEESSCEECS
T ss_pred CCCcCCCCccccccCeEEEeCCCEEEEEEEEEecCCCcEEEEECCEEeec
Confidence 31 1111111122334567899999999999999999999999987753
No 12
>3lcy_A Titin; A-BAND, IG tandem domains, ATP-binding, calmodulin-BI cardiomyopathy, disease mutation, disulfide bond, immunoglo domain, isopeptide bond; 2.50A {Homo sapiens}
Probab=99.88 E-value=1.7e-21 Score=108.03 Aligned_cols=114 Identities=23% Similarity=0.465 Sum_probs=87.7
Q ss_pred CCccEEEEEEeccCCCCeeEEeeCCccCCCCC---------CCeEEEecCCCCCCeEEEEEEEcCCCCceeEeeEEEeee
Q psy12725 1 MLALKFFTCKYEGNPVKTISWMKDGKPVPDHN---------EPVFRIDSVRKEDKGMYQCVIRNEQESAQASGELKLGGR 71 (119)
Q Consensus 1 ~g~~~~l~c~~~~~~~~~v~w~~~~~~~~~~~---------~~~l~~~~~~~~d~g~y~C~~~~~~~~~~~~~~~~v~~~ 71 (119)
.|+.+.|.|.+.+.|.+.+.|++++..+.... ...|.|.+++..|.|.|.|.+.+..+.......+.+..
T Consensus 21 ~G~~v~l~C~~~~~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~~~n~~~~~~~~~~l~v~~- 99 (197)
T 3lcy_A 21 LGEAAQLSCQIVGRPLPDIKWYRFGKELIQSRKYKMSSDGRTHTLTVMTEEQEDEGVYTCIATNEVGEVETSSKLLLQA- 99 (197)
T ss_dssp TTSEEEEEEEEEEESCCEEEEEETTEEECCCSSEEEEESSSEEEEEEECCSGGGCEEEEEEEECSSCEEEEEEEEEEEE-
T ss_pred CCCcEEEEEEEecCCCCEEEEEECCEECCCCccEEEEeCCCEEEEEEecCCccCCEEEEEEEECCCCceeEEEEEEEEc-
Confidence 48999999999888888999999987764322 12799999999999999999998876655555555543
Q ss_pred cCCCeeeec---CCccccCCCCcEEEEeEEccCCCCeEEEEECCEEccc
Q psy12725 72 FDPPVIKES---FSDETLNPGPNYYFKCIASGNPTPEISWYLDGKKLVN 117 (119)
Q Consensus 72 ~~~~~~~~~---~~~~~~~~g~~~~l~C~~~~~p~~~~~W~~~~~~~~~ 117 (119)
+|.+... .....+..|+.+.|.|.+.+.|.+.+.|++++..+..
T Consensus 100 --~p~~~~~~~~~~~~~~~~g~~~~l~C~~~~~p~p~v~W~~~~~~~~~ 146 (197)
T 3lcy_A 100 --TPQFHPGYPLKEKYYGAVGSTLRLHVMYIGRPVPAMTWFHGQKLLQN 146 (197)
T ss_dssp --EEEECTTSCCCSEEEEETTSCEEEEEEEEEESCCEEEEEETTEECCC
T ss_pred --CCCCCCCccCCcceeecCCCeEEEEEEEeeeeCCeeEEeECCEECCC
Confidence 2222211 1233457899999999999999999999999988764
No 13
>2yd9_A Receptor-type tyrosine-protein phosphatase S; hydrolase; HET: NAG B3P; 2.60A {Homo sapiens}
Probab=99.88 E-value=1.2e-21 Score=115.18 Aligned_cols=117 Identities=26% Similarity=0.462 Sum_probs=93.2
Q ss_pred CCccEEEEEEeccCCCCeeEEeeCCccCCC---------CCCCeEEEecCCCCCCeEEEEEEEcCCCCceeE-eeEEEee
Q psy12725 1 MLALKFFTCKYEGNPVKTISWMKDGKPVPD---------HNEPVFRIDSVRKEDKGMYQCVIRNEQESAQAS-GELKLGG 70 (119)
Q Consensus 1 ~g~~~~l~c~~~~~~~~~v~w~~~~~~~~~---------~~~~~l~~~~~~~~d~g~y~C~~~~~~~~~~~~-~~~~v~~ 70 (119)
.|+.+.|.|.+.+.|.+.+.|++++..+.. .....|.|..++..|.|.|.|.+.+..+..... ..+.+.+
T Consensus 122 ~g~~v~l~C~~~g~p~~~v~W~k~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~~l~v~~ 201 (304)
T 2yd9_A 122 RTRTATMLCAASGNPDPEITWFKDFLPVDPSASNGRIKQLRSGALQIESSEETDQGKYECVATNSAGVRYSSPANLYVRV 201 (304)
T ss_dssp TTSCEEECCEEECSSCCEEEEEETTEECCGGGGTTSEEECTTSCEEECSCCGGGCEEEEEEEEETTEEEECCCEEEEEEC
T ss_pred CCCeEEEEEECccCCCCeEEEEECCEECcCCCCcceEEeCCCeEEEEccCCcccCEEEEEEEEeCCCCEEeccEEEEEEe
Confidence 388999999999999999999999876642 134579999999999999999999986543322 3455543
Q ss_pred ecCCCeeeecCCccccCCCCcEEEEeEEccCCCCeEEEEECCEEccc
Q psy12725 71 RFDPPVIKESFSDETLNPGPNYYFKCIASGNPTPEISWYLDGKKLVN 117 (119)
Q Consensus 71 ~~~~~~~~~~~~~~~~~~g~~~~l~C~~~~~p~~~~~W~~~~~~~~~ 117 (119)
...+|.+...+....+..|+.+.|.|.+.+.|.|.+.|++++..+..
T Consensus 202 ~~~~P~~~~~~~~~~v~~G~~v~l~C~~~g~p~p~v~W~~~~~~l~~ 248 (304)
T 2yd9_A 202 QNVAPRFSILPMSHEIMPGGNVNITCVAVGSPMPYVKWMQGAEDLTP 248 (304)
T ss_dssp CCEEEEEEECCCCBCCCTTCCEEEEEEEEEESCCEEEEEETTEECSC
T ss_pred eccCCcEEecCCceEEcCCCeEEEEEEEeeeCCCEEEEEECCEECCC
Confidence 23466777666666788999999999999999999999999998764
No 14
>3kld_A Contactin 4, axcam, BIG-2; cell adhesion, protein complex, receptor protein tyrosine phosphatase; HET: NAG; 2.00A {Mus musculus} PDB: 3jxa_A*
Probab=99.88 E-value=2.4e-21 Score=117.31 Aligned_cols=114 Identities=28% Similarity=0.571 Sum_probs=92.5
Q ss_pred CCccEEEEEEeccCCCCeeEEeeC-CccCCC-----CCCCeEEEecCCCCCCeEEEEEEEcCCCCceeEeeEEEeeecCC
Q psy12725 1 MLALKFFTCKYEGNPVKTISWMKD-GKPVPD-----HNEPVFRIDSVRKEDKGMYQCVIRNEQESAQASGELKLGGRFDP 74 (119)
Q Consensus 1 ~g~~~~l~c~~~~~~~~~v~w~~~-~~~~~~-----~~~~~l~~~~~~~~d~g~y~C~~~~~~~~~~~~~~~~v~~~~~~ 74 (119)
.|+.+.|.|.+.+.|.+.+.|+++ +..+.. .....|.|.+++.+|.|.|+|.+.|..+.......+.+.. +
T Consensus 219 ~G~~v~l~C~~~g~P~p~i~W~k~~~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~N~~G~~~~~~~l~v~~---~ 295 (384)
T 3kld_A 219 KGTTVKLECFALGNPVPTILWRRADGKPIARKARRHKSNGILEIPNFQQEDAGSYECVAENSRGKNVAKGQLTFYA---Q 295 (384)
T ss_dssp TTSCEEEEEEEEEESCCEEEEEETTCCCCCTTCEECTTSCEEEECSCCGGGCEEEEEEEEETTEEEEEEEEEEEEE---E
T ss_pred CCCcEEEEEEEeecCCCcEEEEeCCCccccccceecCCCcEEEECCCChhhCEEEEEEEEcCCCeEEEEEEEEEec---C
Confidence 388999999999999999999995 434422 2356899999999999999999999877665556666543 5
Q ss_pred CeeeecCCccccCCCCcEEEEeEEccCCCCeEEEEECCEEccc
Q psy12725 75 PVIKESFSDETLNPGPNYYFKCIASGNPTPEISWYLDGKKLVN 117 (119)
Q Consensus 75 ~~~~~~~~~~~~~~g~~~~l~C~~~~~p~~~~~W~~~~~~~~~ 117 (119)
|.+...+....+..|+.+.|.|.+.|.|.|.+.|+++|..+..
T Consensus 296 P~~~~~~~~~~v~~g~~v~l~C~~~g~P~p~i~W~k~g~~l~~ 338 (384)
T 3kld_A 296 PNWVQIINDIHVAMEESVFWECKANGRPKPTYRWLKNGDPLLT 338 (384)
T ss_dssp EEEEECCCCEEECTTCCEEEECEEEEESCCEEEEEETTEECCC
T ss_pred CccccCCCceEecCCCCEEEEeECCccCCCeEEEEECCEECCC
Confidence 6666556666788999999999999999999999999998754
No 15
>3b43_A Titin; I-SET IG fold, extended poly-IG filament, elastic FIL structural protein; 3.30A {Oryctolagus cuniculus}
Probab=99.88 E-value=4.4e-21 Score=121.18 Aligned_cols=117 Identities=25% Similarity=0.434 Sum_probs=96.8
Q ss_pred CCccEEEEEEeccCCCCeeEEeeCCccCCCCC---------CCeEEEecCCCCCCeEEEEEEEcCCCCceeEeeEEEeee
Q psy12725 1 MLALKFFTCKYEGNPVKTISWMKDGKPVPDHN---------EPVFRIDSVRKEDKGMYQCVIRNEQESAQASGELKLGGR 71 (119)
Q Consensus 1 ~g~~~~l~c~~~~~~~~~v~w~~~~~~~~~~~---------~~~l~~~~~~~~d~g~y~C~~~~~~~~~~~~~~~~v~~~ 71 (119)
.|+.+.|.|.+.+.|.+.+.|+|++..+.... ...|.|..+...|.|.|.|.+.|..+.......+.+...
T Consensus 115 ~G~~v~l~C~~~g~p~~~v~W~k~g~~l~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~l~v~~~ 194 (570)
T 3b43_A 115 LGFPVAFECRINGSEPLQVSWYKDGELLKDDANLQTSFIHNVATLQILQTDQSHVGQYNCSASNPLGTASSSAKLTLSEH 194 (570)
T ss_dssp TTSCEEEEEEEESSSSCEEEEEETTEECCCCSSEEEEEETTEEEEEESSCCGGGCEEEEEEEEETTEEEEEEEEEEEECC
T ss_pred CCCeEEEEEEEccCCCCEEEEEECCEECcCCCCEEEEEECCEEEEEECcCChHHCEEEEEEEEeCCcEEEEEEEEEEcCC
Confidence 38899999999998889999999998875432 246888899999999999999998766655666666554
Q ss_pred cCCCeeeecCCccccCCCCcEEEEeEEccCCCCeEEEEECCEEccc
Q psy12725 72 FDPPVIKESFSDETLNPGPNYYFKCIASGNPTPEISWYLDGKKLVN 117 (119)
Q Consensus 72 ~~~~~~~~~~~~~~~~~g~~~~l~C~~~~~p~~~~~W~~~~~~~~~ 117 (119)
..+|.+...+....+.+|+.+.|.|.+.+.|.+.+.|++++..+..
T Consensus 195 ~~pp~~~~~p~~~~v~~G~~~~l~C~~~g~p~p~i~W~k~g~~i~~ 240 (570)
T 3b43_A 195 EVPPFFDLKPVSVDLALGESGTFKCHVTGTAPIKITWAKDNREIRP 240 (570)
T ss_dssp CCCCEEEECCCCBCCBSBSCEEEEEEEESSSCCEEEEEETTEECCT
T ss_pred CCCCccccCCceeEecCCCeEEEEEEEEECCCCEEEEEECCEECcC
Confidence 4577777777666788999999999999999999999999988754
No 16
>1epf_A NCAM, protein (neural cell adhesion molecule); immunoglobulin fold, glycoprotein; 1.85A {Rattus norvegicus} SCOP: b.1.1.4 b.1.1.4 PDB: 2ncm_A 3ncm_A
Probab=99.88 E-value=4e-21 Score=106.24 Aligned_cols=114 Identities=22% Similarity=0.500 Sum_probs=90.6
Q ss_pred CCccEEEEEEeccCC-CCeeEEee-CCccCCCC-----------CCCeEEEecCCCCCCeEEEEEEEcCCCCceeEeeEE
Q psy12725 1 MLALKFFTCKYEGNP-VKTISWMK-DGKPVPDH-----------NEPVFRIDSVRKEDKGMYQCVIRNEQESAQASGELK 67 (119)
Q Consensus 1 ~g~~~~l~c~~~~~~-~~~v~w~~-~~~~~~~~-----------~~~~l~~~~~~~~d~g~y~C~~~~~~~~~~~~~~~~ 67 (119)
.|+.+.|.|.+.+.+ .+.+.|++ ++..+... ....|.|.+++..|.|.|.|.+.+..+ ......+.
T Consensus 16 ~G~~v~l~C~~~~~~~~~~v~W~~~~g~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~~~~~~~-~~~~~~~~ 94 (191)
T 1epf_A 16 VGESKFFLCQVAGDAKDKDISWFSPNGEKLSPNQQRISVVWNDDDSSTLTIYNANIDDAGIYKCVVTAEDG-TQSEATVN 94 (191)
T ss_dssp TTCCEEEEEEECCCSCCCEEEEECTTSCEECCBSSSEEEEEEETTEEEEEECSCCGGGCEEEEEEEEETTT-EEEEEEEE
T ss_pred CCCCEEEEEECCCCCCCceEEEEeCCCccccCCCCeEEEEECCCCceEEEEccCCcccCEEEEEEEEcCCC-cceEEEEE
Confidence 489999999999876 78999999 77766421 236799999999999999999999863 22334444
Q ss_pred EeeecCCCeeeecCCccccCCCCcEEEEeEEccCCCCeEEEEECCEEcc
Q psy12725 68 LGGRFDPPVIKESFSDETLNPGPNYYFKCIASGNPTPEISWYLDGKKLV 116 (119)
Q Consensus 68 v~~~~~~~~~~~~~~~~~~~~g~~~~l~C~~~~~p~~~~~W~~~~~~~~ 116 (119)
+.+. .+|.+...+....+..|+.+.|.|.+.+.|.+.+.|++++..+.
T Consensus 95 l~v~-~~p~~~~~~~~~~~~~g~~~~l~C~~~g~p~~~v~W~~~~~~~~ 142 (191)
T 1epf_A 95 VKIF-QKLMFKNAPTPQEFKEGEDAVIVCDVVSSLPPTIIWKHKGRDVI 142 (191)
T ss_dssp EEEE-CCSEEEECCSSEECCTTSCEEECCEEECSSCCEEEEEETTEEGG
T ss_pred EEee-cCceEecCCCcEeecCCCeEEEEEEECCCCCCEEEEEECCEEee
Confidence 4432 56777766666678899999999999999999999999999875
No 17
>3p3y_A Neurofascin; IG domains, cell adhesion; HET: NAG; 2.60A {Homo sapiens} PDB: 3p40_A*
Probab=99.88 E-value=2.3e-21 Score=117.58 Aligned_cols=114 Identities=27% Similarity=0.550 Sum_probs=95.2
Q ss_pred CCccEEEEEEeccCCCCeeEEeeCCccCCCCC------CCeEEEecCCCCCCeEEEEEEEcCCCCceeEeeEEEeeecCC
Q psy12725 1 MLALKFFTCKYEGNPVKTISWMKDGKPVPDHN------EPVFRIDSVRKEDKGMYQCVIRNEQESAQASGELKLGGRFDP 74 (119)
Q Consensus 1 ~g~~~~l~c~~~~~~~~~v~w~~~~~~~~~~~------~~~l~~~~~~~~d~g~y~C~~~~~~~~~~~~~~~~v~~~~~~ 74 (119)
.|+.+.|.|.+.+.|.+.+.|++++..+.... ...|.|..++..|.|.|.|.+.|..+.......+.+. .+
T Consensus 236 ~G~~v~l~C~~~g~p~~~v~W~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~l~V~---~~ 312 (404)
T 3p3y_A 236 RGMDLLLECIASGVPTPDIAWYKKGGDLPSDKAKFENFNKALRITNVSEEDSGEYFCLASNKMGSIRHTISVRVK---AA 312 (404)
T ss_dssp TTSCEEEECCBCCSSCCEEEEEETTBCCCTTTEEEEGGGTEEEESSCCGGGCEEEEEEEECSSCEEEEEEEEEEE---EE
T ss_pred cCCCEEEEEEECCCCCCcEEEEECCEECCCCcccccccCceEEEccCCHhHCEEEEEEEEeCCCcEEEEEEEEEe---CC
Confidence 38899999999998989999999998775432 4689999999999999999999987765555555554 35
Q ss_pred CeeeecCCccccCCCCcEEEEeEEccCCCCeEEEEECCEEccc
Q psy12725 75 PVIKESFSDETLNPGPNYYFKCIASGNPTPEISWYLDGKKLVN 117 (119)
Q Consensus 75 ~~~~~~~~~~~~~~g~~~~l~C~~~~~p~~~~~W~~~~~~~~~ 117 (119)
|.+...+....+.+|+.+.|.|.+.+.|.+.+.|+++|..+..
T Consensus 313 p~~~~~~~~~~v~~g~~~~l~C~~~g~p~p~v~W~~~g~~~~~ 355 (404)
T 3p3y_A 313 PYWLDEPKNLILAPGEDGRLVCRANGNPKPTVQWMVNGEPLQS 355 (404)
T ss_dssp EEEEECCCCEEECTTCCEEEECEEEEESCCEEEEEETTEEGGG
T ss_pred CeeeccCCcceeecCCcEEEEEEccccCCCceEEEECCEecCC
Confidence 6666666666788999999999999999999999999998864
No 18
>2d3v_A Leukocyte immunoglobulin-like receptor subfamily A member 5 isoform 1; immunoglobulin-like fold, immune system; 1.85A {Homo sapiens}
Probab=99.87 E-value=4.5e-21 Score=106.73 Aligned_cols=112 Identities=18% Similarity=0.257 Sum_probs=74.0
Q ss_pred CCccEEEEEEeccCCCCeeEEeeCCccCCC--------CCCCeEEEecCCCCCCeEEEEEEEcCCCCcee--EeeEEEee
Q psy12725 1 MLALKFFTCKYEGNPVKTISWMKDGKPVPD--------HNEPVFRIDSVRKEDKGMYQCVIRNEQESAQA--SGELKLGG 70 (119)
Q Consensus 1 ~g~~~~l~c~~~~~~~~~v~w~~~~~~~~~--------~~~~~l~~~~~~~~d~g~y~C~~~~~~~~~~~--~~~~~v~~ 70 (119)
.|+.|+|.|.+.+.+. .+.|+|++..+.. .....|.|.+++..|.|.|.|.+.+..+.... ...+.+..
T Consensus 18 ~G~~v~L~C~~~~~~~-~~~W~k~g~~~~~~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~a~n~~g~~~~s~~~~l~V~~ 96 (196)
T 2d3v_A 18 RGNSVTIRCQGTLEAQ-EYRLVKEGSPEPWDTQNPLEPKNKARFSIPSMTEHHAGRYRCYYYSPAGWSEPSDPLELVVTG 96 (196)
T ss_dssp TTCCEEEEEECCTTCC-EEEEEETTCSSCSEEECCCSSTTEEEEEESSCCGGGCEEEEEEEEETTEECBCCCCEEEEEEC
T ss_pred CCCeEEEEEeCCCCCc-EEEEEECCCCCCcccccccCCccccEEEeccCChhHCeEEEEEEeCCCCcCCcCccEEEEecC
Confidence 4899999999987665 8999999876632 23467999999999999999999886542222 23444433
Q ss_pred ecCCCeeeecCCccccCCCCcEEEEeEEccCCCCeEEEEECCEEc
Q psy12725 71 RFDPPVIKESFSDETLNPGPNYYFKCIASGNPTPEISWYLDGKKL 115 (119)
Q Consensus 71 ~~~~~~~~~~~~~~~~~~g~~~~l~C~~~~~p~~~~~W~~~~~~~ 115 (119)
...+|.+...+ ...+.+|+.+.|.|.+.+.| +.+.|+|+|..+
T Consensus 97 ~~~~p~i~~~~-~~~v~~G~~v~L~C~~~~~p-~~~~W~k~g~~~ 139 (196)
T 2d3v_A 97 FYNKPTLSALP-SPVVTSGENVTLQCGSRLRF-DRFILTEEGDHK 139 (196)
T ss_dssp SSCCCEEEC------------CEEEEEESSCC-SEEEEEEC---C
T ss_pred CCCCCeEEccC-CccccCCCcEEEEEEcCCCC-CEEEEEccCCcc
Confidence 22356555443 34678999999999999888 899999999876
No 19
>2iep_A Muscle-specific kinase receptor; beta-sandwich, signaling protein,transferase; 2.21A {Rattus norvegicus}
Probab=99.87 E-value=4.9e-21 Score=105.94 Aligned_cols=114 Identities=26% Similarity=0.478 Sum_probs=90.0
Q ss_pred CCccEEEEEEeccCCCCeeEEeeCCccCCCC--------CCCeEEEecCCCCCCeEEEEEEEcCCCCc-eeEeeEEEeee
Q psy12725 1 MLALKFFTCKYEGNPVKTISWMKDGKPVPDH--------NEPVFRIDSVRKEDKGMYQCVIRNEQESA-QASGELKLGGR 71 (119)
Q Consensus 1 ~g~~~~l~c~~~~~~~~~v~w~~~~~~~~~~--------~~~~l~~~~~~~~d~g~y~C~~~~~~~~~-~~~~~~~v~~~ 71 (119)
.|+.+.|.|.+.+.|.+.+.|++++..+... ....|.|.+++..|.|.|.|.+.+..+.. .....+.+.
T Consensus 21 ~G~~v~l~C~~~~~p~~~i~W~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~~~~~~~~~~~~~~~l~v~-- 98 (192)
T 2iep_A 21 VEEVATFMCAVESYPQPEISWTRNKILIKLFDTRYSIRENGQLLTILSVEDSDDGIYCCTANNGVGGAVESCGALQVK-- 98 (192)
T ss_dssp TTSCEEEECCEEEESCCEEEEEETTEECCTTCTTEEEEGGGTEEEESSCCGGGCEEEEEEEECSSSCCEEEEEEEEEE--
T ss_pred CCCcEEEEeeCCCCCCCeEEEEECCEEccccCccEEEcCCccEEEEcCCCcccCeEEEEEEEcCCCceeEeEEEEEEE--
Confidence 4899999999998888899999998876432 23568999999999999999999876552 333444443
Q ss_pred cCCCeeeecCCccccCCCCcEEEEeEEccCCCCeEEEEECCEEccc
Q psy12725 72 FDPPVIKESFSDETLNPGPNYYFKCIASGNPTPEISWYLDGKKLVN 117 (119)
Q Consensus 72 ~~~~~~~~~~~~~~~~~g~~~~l~C~~~~~p~~~~~W~~~~~~~~~ 117 (119)
.+|.+...+....+..|+.+.|.|.+.+.|.+.+.|++++..+..
T Consensus 99 -~~p~~~~~~~~~~~~~g~~~~l~C~~~g~p~~~v~W~~~~~~~~~ 143 (192)
T 2iep_A 99 -MKPKITRPPINVKIIEGLKAVLPCTTMGNPKPSVSWIKGDSALRE 143 (192)
T ss_dssp -EEEEEEECCCCEEEETTSCEEECCEEEEESCCEEEEEETTEECCC
T ss_pred -eCCccccCCcceEEeCCCcEEEEEEEeccCCceEEEEeCCEEccC
Confidence 245555555555678999999999999999999999999988754
No 20
>2v5t_A NCAM2, N-CAM 2, neural cell adhesion molecule 2; phosphorylation, immunoglobulin domain, membrane, glycoprote adhesion, transmembrane; HET: NAG; 2.00A {Homo sapiens}
Probab=99.87 E-value=9.5e-21 Score=104.48 Aligned_cols=116 Identities=26% Similarity=0.483 Sum_probs=83.9
Q ss_pred CCccEEEEEEeccCCCCeeEEeeCCccCCC--------CCCCeEEEecCCCCCCeEEEEEEEcCCCCceeEeeEEEeeec
Q psy12725 1 MLALKFFTCKYEGNPVKTISWMKDGKPVPD--------HNEPVFRIDSVRKEDKGMYQCVIRNEQESAQASGELKLGGRF 72 (119)
Q Consensus 1 ~g~~~~l~c~~~~~~~~~v~w~~~~~~~~~--------~~~~~l~~~~~~~~d~g~y~C~~~~~~~~~~~~~~~~v~~~~ 72 (119)
.|+.+.|.|.+.+.|.+.+.|++++..+.. .....|.|.+++..|.|.|.|.+.+..........+.+.+.
T Consensus 16 ~G~~v~l~C~~~~~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~~~~~~~~~~~~~~~~l~v~- 94 (189)
T 2v5t_A 16 QGEDAEVVCRVSSSPAPAVSWLYHNEEVTTISDNRFAMLANNNLQILNINKSDEGIYRCEGRVEARGEIDFRDIIVIVN- 94 (189)
T ss_dssp TTSCEEECCEEECSSCCEEEEEC-----CBCCCTTEEECTTSCEEETTCCGGGCEEEEEEEEETTTTEEEEEEEEEEEE-
T ss_pred CCCcEEEEEEEcCCCCCEEEEEECCccceeccCCeEEEecCCCEEEeeCCHhHCcEEEEEEEEcCCCceEEEEEEEEec-
Confidence 489999999999888899999998876542 13457999999999999999999987644333333333332
Q ss_pred CCCeeeecCC--ccccCCCCcEEEEeEEccCCCCeEEEEECCEEccc
Q psy12725 73 DPPVIKESFS--DETLNPGPNYYFKCIASGNPTPEISWYLDGKKLVN 117 (119)
Q Consensus 73 ~~~~~~~~~~--~~~~~~g~~~~l~C~~~~~p~~~~~W~~~~~~~~~ 117 (119)
.+|.+..... ...+..|+.+.|.|.+.+.|.+.+.|+++|..+..
T Consensus 95 ~~p~~~~~~~~~~~~~~~g~~v~l~C~~~g~p~~~v~W~~~g~~~~~ 141 (189)
T 2v5t_A 95 VPPAISMPQKSFNATAERGEEMTFSCRASGSPEPAISWFRNGKLIEE 141 (189)
T ss_dssp EEEEEECSCCEEEEETTSCCCEEEECEEEEESCCEEEEEETTEECCC
T ss_pred CCCCcccccccccccccCCCcEEEEEEEccCCCCeEEEEECCEECcC
Confidence 2444443332 34577899999999999889999999999998764
No 21
>2rik_A Titin; I-SET IG fold, poly-IG linear array, structural protein; 1.60A {Oryctolagus cuniculus} PDB: 2rjm_A
Probab=99.86 E-value=2.3e-20 Score=108.72 Aligned_cols=114 Identities=22% Similarity=0.488 Sum_probs=89.9
Q ss_pred CCccEEEEEEeccCCCCeeEEeeCCccCCCC---------CCCeEEEecCCCCCCeEEEEEEEcCCCCceeEeeEEEeee
Q psy12725 1 MLALKFFTCKYEGNPVKTISWMKDGKPVPDH---------NEPVFRIDSVRKEDKGMYQCVIRNEQESAQASGELKLGGR 71 (119)
Q Consensus 1 ~g~~~~l~c~~~~~~~~~v~w~~~~~~~~~~---------~~~~l~~~~~~~~d~g~y~C~~~~~~~~~~~~~~~~v~~~ 71 (119)
.|+.+.|.|.+.+.|.+.+.|++++..+... ....|.|.+++..|.|.|.|.+.+..+.......+.+.
T Consensus 19 ~G~~v~l~C~~~g~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~~~n~~g~~~~~~~l~V~-- 96 (284)
T 2rik_A 19 LGESGTFKCHVTGTAPIKITWAKDNREIRPGGNYKMTLVENTATLTVLKVTKGDAGQYTCYASNVAGKDSCSAQLGVQ-- 96 (284)
T ss_dssp TTCCEEEEEEEESSSCCEEEEEETTEECCSSSSEEEEEETTEEEEEESSCCGGGCEEEEEEEEETTEEEEEEEEEEEE--
T ss_pred CCCcEEEEEEEEcCCCCEEEEEECCEECcCCCcEEEEEcCCEEEEEEecCCcccCEEEEEEEEECCceEEEEEEEEcc--
Confidence 4899999999998888899999999876542 23679999999999999999999876554444444443
Q ss_pred cCCCeeeecCC-ccccCCCCcEEEEeEEccCCCCeEEEEECCEEccc
Q psy12725 72 FDPPVIKESFS-DETLNPGPNYYFKCIASGNPTPEISWYLDGKKLVN 117 (119)
Q Consensus 72 ~~~~~~~~~~~-~~~~~~g~~~~l~C~~~~~p~~~~~W~~~~~~~~~ 117 (119)
.+|.+..... ...+..|+.+.|.|.+.+.|.+.+.|++++..+..
T Consensus 97 -~~p~~~~~~~~~~~v~~g~~~~l~C~~~g~p~~~v~W~~~~~~~~~ 142 (284)
T 2rik_A 97 -EPPRFIKKLEPSRIVKQDEHTRYECKIGGSPEIKVLWYKDETEIQE 142 (284)
T ss_dssp -CCCEEEECCCSEEEEETTCCEEEEEEEESSSCCEEEEEETTEECCC
T ss_pred -CCCcccccCCCceEecCCceEEEEEEEeeeCCCEEEEEECCEECcC
Confidence 3555544333 34577999999999999999999999999988754
No 22
>2v44_A NCAM2, neural cell adhesion molecule 2; phosphorylation, immunoglobulin domain, IG, membrane, homphilic, glycoprotein, transmembrane; 1.77A {Homo sapiens} PDB: 2xy2_A* 2vaj_A
Probab=99.86 E-value=1.9e-20 Score=103.42 Aligned_cols=113 Identities=23% Similarity=0.494 Sum_probs=85.4
Q ss_pred CCccEEEEEEeccCCCCeeEEee-CCccCCCCC---------CCeEEEecCCCCCCeEEEEEEEcCCCCceeEeeEEEee
Q psy12725 1 MLALKFFTCKYEGNPVKTISWMK-DGKPVPDHN---------EPVFRIDSVRKEDKGMYQCVIRNEQESAQASGELKLGG 70 (119)
Q Consensus 1 ~g~~~~l~c~~~~~~~~~v~w~~-~~~~~~~~~---------~~~l~~~~~~~~d~g~y~C~~~~~~~~~~~~~~~~v~~ 70 (119)
.|+.+.|.|.+.+.|. .+.|++ ++..+.... ...|.|.+++.+|.|.|.|.+.+..+.. ....+.+.+
T Consensus 16 ~G~~v~L~C~~~~~p~-~v~W~~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~~~~~~g~~-~~~~~~l~v 93 (189)
T 2v44_A 16 VGESKFFTCTAIGEPE-SIDWYNPQGEKIISTQRVVVQKEGVRSRLTIYNANIEDAGIYRCQATDAKGQT-QEATVVLEI 93 (189)
T ss_dssp TTCCEEEEEEEEECCS-EEEEECTTSCBCCCCSSEEEEEETTEEEEEECSCCGGGCEEEEEEEECTTSCE-EEEEEEEEE
T ss_pred cCCcEEEEEEeecCCe-eEEEEeCCCCccCCCceEEEECCCCeEEEEEccCCcccCeEEEEEEEeCCCCc-EEEEEEEEE
Confidence 4899999999988776 899999 666654322 2479999999999999999999886543 133333333
Q ss_pred ecCCCeeeecCCccccCCCCcEEEEeEEccCCCCeEEEEECCEEcc
Q psy12725 71 RFDPPVIKESFSDETLNPGPNYYFKCIASGNPTPEISWYLDGKKLV 116 (119)
Q Consensus 71 ~~~~~~~~~~~~~~~~~~g~~~~l~C~~~~~p~~~~~W~~~~~~~~ 116 (119)
. .+|.+...+....+..|+.+.|.|.+.+.|.|.+.|++++..+.
T Consensus 94 ~-~~p~~~~~~~~~~~~~g~~~~l~C~~~g~p~p~v~W~~~~~~~~ 138 (189)
T 2v44_A 94 Y-QKLTFREVVSPQEFKQGEDAEVVCRVSSSPAPAVSWLYHNEEVT 138 (189)
T ss_dssp E-CCCEEESCCCSEEEETTSCEEECCEEECSSCCEEEEEEEC--CE
T ss_pred e-cCCceeecCCcEEEeCCCCEEEEEEECcCCCCcEEEEECCcEEe
Confidence 2 45666555555567899999999999999999999999988764
No 23
>2yd9_A Receptor-type tyrosine-protein phosphatase S; hydrolase; HET: NAG B3P; 2.60A {Homo sapiens}
Probab=99.86 E-value=1.3e-20 Score=110.85 Aligned_cols=117 Identities=27% Similarity=0.484 Sum_probs=86.8
Q ss_pred CCccEEEEEEeccCCCCeeEEeeCCccCCCC--------C--CCeEEEecCCC-CCCeEEEEEEEcCCCCceeEeeEEEe
Q psy12725 1 MLALKFFTCKYEGNPVKTISWMKDGKPVPDH--------N--EPVFRIDSVRK-EDKGMYQCVIRNEQESAQASGELKLG 69 (119)
Q Consensus 1 ~g~~~~l~c~~~~~~~~~v~w~~~~~~~~~~--------~--~~~l~~~~~~~-~d~g~y~C~~~~~~~~~~~~~~~~v~ 69 (119)
.|+.+.|.|.+.+.|.+.+.|++++..+... . ...|.|.+++. .|.|.|.|.+.+..+.......+.+.
T Consensus 20 ~G~~v~l~C~~~g~p~~~i~W~k~g~~i~~~~~~~~~~~~~~~~~L~i~~~~~~~D~G~Y~C~a~n~~g~~~~~~~l~V~ 99 (304)
T 2yd9_A 20 SGGVASFVCQATGDPKPRVTWNKKGKKVNSQRFETIEFDESAGAVLRIQPLRTPRDENVYECVAQNSVGEITVHAKLTVL 99 (304)
T ss_dssp TTSCEEEEEEEECSSCCEEEEC-------CTTEEEEEETTTTEEEEEECSCCTTTTCSEEEEEEECSSCEECCEEEEEEE
T ss_pred CCCeEEEEEEEEEeCCCeEEEEECCEECCCCceEEEEecCCCceEEEEecccccCCCeEEEEEEECCCCeEEEEEEEEEe
Confidence 4899999999999899999999998776432 1 25689999998 99999999999987665555556554
Q ss_pred eec----CCCeeeecCCccccCCCCcEEEEeEEccCCCCeEEEEECCEEccc
Q psy12725 70 GRF----DPPVIKESFSDETLNPGPNYYFKCIASGNPTPEISWYLDGKKLVN 117 (119)
Q Consensus 70 ~~~----~~~~~~~~~~~~~~~~g~~~~l~C~~~~~p~~~~~W~~~~~~~~~ 117 (119)
... ..|.+...+....+..|+.+.|.|.+.+.|.+.+.|++++..+..
T Consensus 100 ~~~~~p~~~p~i~~~~~~~~v~~g~~v~l~C~~~g~p~~~v~W~k~~~~~~~ 151 (304)
T 2yd9_A 100 REDQLPSGFPNIDMGPQLKVVERTRTATMLCAASGNPDPEITWFKDFLPVDP 151 (304)
T ss_dssp CGGGCCTTCCEEEECCCCEEEETTSCEEECCEEECSSCCEEEEEETTEECCG
T ss_pred ccccCCCCCCeeecCCccEEEeCCCeEEEEEECccCCCCeEEEEECCEECcC
Confidence 321 115566556556678899999999999999999999999988754
No 24
>1bih_A Hemolin; insect immunity, LPS-binding, homophilic adhesion; 3.10A {Hyalophora cecropia} SCOP: b.1.1.4 b.1.1.4 b.1.1.4 b.1.1.4
Probab=99.86 E-value=1.2e-20 Score=114.18 Aligned_cols=114 Identities=23% Similarity=0.444 Sum_probs=92.4
Q ss_pred CCccEEEEEEeccCCCCeeEEeeCCccCCCC-----------CCCeEEEecCCCCCCeEEEEEEEcCCCCcee-EeeEEE
Q psy12725 1 MLALKFFTCKYEGNPVKTISWMKDGKPVPDH-----------NEPVFRIDSVRKEDKGMYQCVIRNEQESAQA-SGELKL 68 (119)
Q Consensus 1 ~g~~~~l~c~~~~~~~~~v~w~~~~~~~~~~-----------~~~~l~~~~~~~~d~g~y~C~~~~~~~~~~~-~~~~~v 68 (119)
.|+.+.|.|.+.+.|.+.+.|++++..+... ....|.|..++..|.|.|.|.+.|..+.... ...+.+
T Consensus 226 ~G~~v~l~C~~~g~p~~~i~W~~~g~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~~l~V 305 (395)
T 1bih_A 226 AGDVTMIYCMYGSNPMGYPNYFKNGKDVNGNPEDRITRHNRTSGKRLLFKTTLPEDEGVYTCEVDNGVGKPQKHSLKLTV 305 (395)
T ss_dssp TTSCEEEEEEEECSSCCCCEEEETTEECCCCTTSSEESCSSSTTSEEEESSCCGGGCEEEEEEECCSSSSCEEEEEEEEE
T ss_pred CCCcEEEEEEeccCCCCeEEEEECCEEcCCCCceeEEEEecCCCceEEEccCChhhCEEEEEEEEeCCCCceEEEEEEEE
Confidence 3889999999999999999999999876432 1237999999999999999999998766443 555555
Q ss_pred eeecCCCeeeecCCc-cccCCCCcEEEEeEEccCCCCeEEEEECCEEccc
Q psy12725 69 GGRFDPPVIKESFSD-ETLNPGPNYYFKCIASGNPTPEISWYLDGKKLVN 117 (119)
Q Consensus 69 ~~~~~~~~~~~~~~~-~~~~~g~~~~l~C~~~~~p~~~~~W~~~~~~~~~ 117 (119)
. .+|.+...+.. ..+..|+.+.|.|.+.+.|.|.+.|+++|..+..
T Consensus 306 ~---~~P~~~~~~~~~~~~~~g~~~~l~C~~~g~p~p~v~W~~~g~~~~~ 352 (395)
T 1bih_A 306 V---SAPKYEQKPEKVIVVKQGQDVTIPCKVTGLPAPNVVWSHNAKPLSG 352 (395)
T ss_dssp E---EEEEEEECCCSEEEECTTSCEEEECEEEEESCCCCEEEETTEECCS
T ss_pred E---cCCccccCCCcceEecCCCeEEEEEEECcccCCeeEEEECCEECCC
Confidence 4 35666665554 5678999999999999999999999999998754
No 25
>2jll_A NCAM2, neural cell adhesion molecule 2; immunoglobulin domain, immunoglobulin superfamily, transmembrane, phosphoprotein, membrane, glycoprotein; HET: NAG; 2.30A {Homo sapiens} PDB: 2xyc_A* 2jlk_A* 2doc_A
Probab=99.86 E-value=1.2e-20 Score=114.04 Aligned_cols=114 Identities=22% Similarity=0.345 Sum_probs=90.8
Q ss_pred CCccEEEEEEeccCCCCeeEEeeC--CccCCCC--------------CCCeEEEecCCCCCCeEEEEEEEcCCCCceeEe
Q psy12725 1 MLALKFFTCKYEGNPVKTISWMKD--GKPVPDH--------------NEPVFRIDSVRKEDKGMYQCVIRNEQESAQASG 64 (119)
Q Consensus 1 ~g~~~~l~c~~~~~~~~~v~w~~~--~~~~~~~--------------~~~~l~~~~~~~~d~g~y~C~~~~~~~~~~~~~ 64 (119)
.|+.+.|.|.+.+.|.+.|.|+|+ +..+... ....|.|.+++.+|.|.|.|.+.|..+......
T Consensus 14 ~G~~v~l~C~~~g~p~p~v~W~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~a~n~~g~~~~~~ 93 (389)
T 2jll_A 14 ENGQVTLVCDAEGEPIPEITWKRAVDGFTFTEGDKSLDGRIEVKGQHGSSSLHIKDVKLSDSGRYDCEAASRIGGHQKSM 93 (389)
T ss_dssp TTSEEEEEEEEECSSCCEEEEEETTTTEEECC--CCSSSSEEEEECSSEEEEEEESCCGGGCEEEEEEEECSSCEEEEEE
T ss_pred CCCeEEEEEEeecccCCeEEEEeCCCCceeccCcCCCCCeEEEeccCCcceEEEcccChhhCEEEEEEEEeCCCCcceEE
Confidence 389999999999999999999999 6655321 234799999999999999999999877665555
Q ss_pred eEEEeeecCCCeeeecCCccccCCCCcEEEEeEEccCCCCeEEEEECCEEccc
Q psy12725 65 ELKLGGRFDPPVIKESFSDETLNPGPNYYFKCIASGNPTPEISWYLDGKKLVN 117 (119)
Q Consensus 65 ~~~v~~~~~~~~~~~~~~~~~~~~g~~~~l~C~~~~~p~~~~~W~~~~~~~~~ 117 (119)
.+.|. .+|.+...+....+..|+.+.|.|.+.+.|.+.+.|+++|..+..
T Consensus 94 ~l~V~---~~P~~~~~~~~~~~~~g~~~~l~C~~~g~p~~~i~W~~~g~~l~~ 143 (389)
T 2jll_A 94 YLDIE---YAPKFISNQTIYYSWEGNPINISCDVKSNPPASIHWRRDKLVLPA 143 (389)
T ss_dssp EEEEE---EEEEECCSCCEEEECTTCCEEEEECEEEESCCEEEEEETTEESSC
T ss_pred EEEEE---eCCEEecCcceEEeccCCEEEEEEEEEecCCCeEEEEECCccCCc
Confidence 55554 355555544333568899999999999999999999999988764
No 26
>2gi7_A GPVI protein; IG-like domains, blood clotting, cell adhesion; 2.40A {Homo sapiens}
Probab=99.86 E-value=2.6e-20 Score=102.84 Aligned_cols=112 Identities=16% Similarity=0.236 Sum_probs=84.2
Q ss_pred CCccEEEEEEeccCCCCeeEEeeCCccCCCCCCCeEEEecCCCCCCeEEEEEEEcCCCCcee--EeeEEEeeecCCCeee
Q psy12725 1 MLALKFFTCKYEGNPVKTISWMKDGKPVPDHNEPVFRIDSVRKEDKGMYQCVIRNEQESAQA--SGELKLGGRFDPPVIK 78 (119)
Q Consensus 1 ~g~~~~l~c~~~~~~~~~v~w~~~~~~~~~~~~~~l~~~~~~~~d~g~y~C~~~~~~~~~~~--~~~~~v~~~~~~~~~~ 78 (119)
.|+.++|.|.+.+ +.+.+.|+|++.. .......|.|.+++..|.|.|.|.+.+..+.... ...+.+.....+|.+.
T Consensus 21 ~G~~v~L~C~~~~-~~~~~~W~k~g~~-~~~~~~~L~i~~v~~~D~G~Y~C~a~n~~g~~~~s~~~~l~V~~~~~~p~i~ 98 (184)
T 2gi7_A 21 LEKPVTLRCQGPP-GVDLYRLEKLSSS-RYQDQAVLFIPAMKRSLAGRYRCSYQNGSLWSLPSDQLELVATGVFAKPSLS 98 (184)
T ss_dssp TTCCEEEEEECST-TCSEEEEEETTTC-CEESSSEEEESSCCGGGCEEEEEEEEETTEEBCCCCCEEEEEESSSCCCEEE
T ss_pred CCCcEEEEEeCCC-CCCEEEEEECCcc-ccCcccEEEECcCChhhCceEEEEEEcCCCccCCCCCEEEEecCcCCCCEEE
Confidence 4899999999987 7789999999876 2235678999999999999999999986532222 2344443323456666
Q ss_pred ecCCccccCCCCcEEEEeEEccCCCCeEEEEECCEEcc
Q psy12725 79 ESFSDETLNPGPNYYFKCIASGNPTPEISWYLDGKKLV 116 (119)
Q Consensus 79 ~~~~~~~~~~g~~~~l~C~~~~~p~~~~~W~~~~~~~~ 116 (119)
..+ ...+.+|+.+.|.|.+.+. ++.+.|+++|..+.
T Consensus 99 ~~p-~~~v~~G~~v~l~C~~~~~-~~~~~w~k~g~~~~ 134 (184)
T 2gi7_A 99 AQP-GPAVSSGGDVTLQCQTRYG-FDQFALYKEGDPAP 134 (184)
T ss_dssp EEC-CCSSCCTTCEEEEEECSSC-CCEEEEEECCCCTT
T ss_pred eCC-CceecCCCcEEEEEEcCCC-CcEEEEEECCCcCc
Confidence 555 4467899999999997654 46999999987654
No 27
>1uct_A Immunoglobulin alpha FC receptor; beta stands, immune system; 2.10A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 PDB: 1ovz_A* 1ow0_C*
Probab=99.86 E-value=1e-20 Score=107.03 Aligned_cols=114 Identities=21% Similarity=0.235 Sum_probs=83.2
Q ss_pred CCccEEEEEEeccCCCCeeEEeeCCccCC--------CCCCC--eEEEecCCCCCCeEEEEEEEcCCCCceeEeeEEEee
Q psy12725 1 MLALKFFTCKYEGNPVKTISWMKDGKPVP--------DHNEP--VFRIDSVRKEDKGMYQCVIRNEQESAQASGELKLGG 70 (119)
Q Consensus 1 ~g~~~~l~c~~~~~~~~~v~w~~~~~~~~--------~~~~~--~l~~~~~~~~d~g~y~C~~~~~~~~~~~~~~~~v~~ 70 (119)
.|+.|+|.|.+.+ +.+.+.|+|++..+. ..... .|.|.+++.+|.|.|.|.+.+..+....+..+.+.+
T Consensus 22 ~G~~vtL~C~~~~-~~~~~~W~k~g~~~~~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~n~~~~~~~s~~~~l~V 100 (218)
T 1uct_A 22 LDGSVKIQCQAIR-EAYLTQLMIIKNSTYREIGRRLKFWNETDPEFVIDHMDANKAGRYQCQYRIGHYRFRYSDTLELVV 100 (218)
T ss_dssp TTCCEEEEECCCT-TCSEEEEEEEETTEEEECSEECC----CCCEEEECSCCGGGCEEEEEEEEETTTEEEECCCEEEEE
T ss_pred CCCCEEEEEEcCC-CCCEEEEEECCCcccccccccCCCCcceeeEEEEcccccccCEEEEEEEEcCCCceeecCCEEEEE
Confidence 4899999999976 678999999887642 12345 899999999999999999998754333333333333
Q ss_pred e--cCCCeeeecCCccccCCCCcEEEEeEEccCCCCeEEEEECCEEcc
Q psy12725 71 R--FDPPVIKESFSDETLNPGPNYYFKCIASGNPTPEISWYLDGKKLV 116 (119)
Q Consensus 71 ~--~~~~~~~~~~~~~~~~~g~~~~l~C~~~~~p~~~~~W~~~~~~~~ 116 (119)
. ..+|.+...+ ...+.+|+.++|.|...+.+.+.+.|+|+|..+.
T Consensus 101 ~~~~~~P~i~~~p-~~~v~~G~~v~L~C~~~~~~~~~~~W~k~g~~~~ 147 (218)
T 1uct_A 101 TGLYGKPFLSADR-GLVLMPGENISLTCSSAHIPFDRFSLAKEGELSL 147 (218)
T ss_dssp ECSSCCCEEEESS-CSEECTTCCCEEEEECSSSCCSEEEEEETTCSSC
T ss_pred cCcccCCEEEeCC-CCccCCCCCEEEEEeCCCCCCCEEEEEECCCccc
Confidence 2 3456665444 4467899999999977777778999999987653
No 28
>2pet_A Lutheran blood group glycoprotein; immunoglobulin superfamily., cell adhesion; 1.70A {Homo sapiens} PDB: 2pf6_A
Probab=99.86 E-value=2.3e-20 Score=105.83 Aligned_cols=117 Identities=18% Similarity=0.364 Sum_probs=87.5
Q ss_pred CCccEEEEEEeccCCC-CeeEEeeCCccCC-----------------------------CCCCCeEEEecCCCCCCeEEE
Q psy12725 1 MLALKFFTCKYEGNPV-KTISWMKDGKPVP-----------------------------DHNEPVFRIDSVRKEDKGMYQ 50 (119)
Q Consensus 1 ~g~~~~l~c~~~~~~~-~~v~w~~~~~~~~-----------------------------~~~~~~l~~~~~~~~d~g~y~ 50 (119)
.|+.+.|.|.+.+.+. +.+.|++++.... ......|.|.+++..|+|.|.
T Consensus 14 ~G~~v~L~C~~~~~~~~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~L~i~~v~~~D~G~Y~ 93 (231)
T 2pet_A 14 RGKSVILDCTPTGTHDHYMLEWFLTDRSGARPRLASAEMQGSELQVTMHDTRGRSPPYQLDSQGRLVLAEAQVGDERDYV 93 (231)
T ss_dssp TTCCEEECCCCBSCCSEEEEEEEEECTTCCCCEEEEEEEETTEEEEEECCCSCCSSCCEECTTCCEEESSCCGGGCEEEE
T ss_pred cCCCEEEecccCCCCCceEEEEEEeCCCceeEEEEeccccCCccccccccccccccccccCCCceEEEcccCcccCceEE
Confidence 4899999999998774 8999997544311 223345999999999999999
Q ss_pred EEEEcCC-CCceeEeeEEEeeecCCCeeeecCCccccCCCCcE-EEEeEE-ccCCCCeEEEEECCEEccc
Q psy12725 51 CVIRNEQ-ESAQASGELKLGGRFDPPVIKESFSDETLNPGPNY-YFKCIA-SGNPTPEISWYLDGKKLVN 117 (119)
Q Consensus 51 C~~~~~~-~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~g~~~-~l~C~~-~~~p~~~~~W~~~~~~~~~ 117 (119)
|.+.+.. +.......+.+......|.+...+....+..|+.+ .|.|.+ .+.|.|.+.|++++..+..
T Consensus 94 C~~~~~~~~~~~~~~~l~V~~~p~~~~~~~~~~~~~~~~g~~~~~l~C~~~~~~p~p~i~W~~~~~~~~~ 163 (231)
T 2pet_A 94 CVVRAGAAGTAEATARLNVFAKPEATEVSPNKGTLSVMEDSAQEIATCNSRNGNPAPKITWYRNGQRLEV 163 (231)
T ss_dssp EEEECGGGCEEEEEEEEEEEBCCCCCEEEECCSSCCTTCCSEEEEEEEEEEEEBSCCEEEEEETTEECCC
T ss_pred EEEEecCCCceEEEEEEEEEecCCCcEEecCCcceeecCCCceEEEEEEeECcccCCEEEEEECCccCcc
Confidence 9999875 44444555555433233555555555567788887 999999 8889999999999998764
No 29
>3nl4_L Antigen binding fragment, immunoglobulin IGG - LI; FAB, rabbit, conformation-specific, amyloid, immune system; 1.54A {Oryctolagus cuniculus} PDB: 4hbc_L
Probab=99.85 E-value=9.7e-21 Score=106.39 Aligned_cols=117 Identities=15% Similarity=0.254 Sum_probs=85.4
Q ss_pred CCccEEEEEEeccCCCCeeEEeeCC--ccCC--------------C-------CCCCeEEEecCCCCCCeEEEEEEEcCC
Q psy12725 1 MLALKFFTCKYEGNPVKTISWMKDG--KPVP--------------D-------HNEPVFRIDSVRKEDKGMYQCVIRNEQ 57 (119)
Q Consensus 1 ~g~~~~l~c~~~~~~~~~v~w~~~~--~~~~--------------~-------~~~~~l~~~~~~~~d~g~y~C~~~~~~ 57 (119)
.|+.|.|.|.+.+.+.+.+.|||+. ..+. . .....|.|.+++.+|+|.|.|.+.+..
T Consensus 15 ~G~~v~L~C~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~D~G~Y~C~~~~~~ 94 (213)
T 3nl4_L 15 VGGTVTIKCQASQSISSYLAWYQQKPGQRPRLLIYETSTLASGVPSRFKGSGSGTDFTLTISDLECADAATYYCQSTYEN 94 (213)
T ss_dssp TTCCEEEEEEESSCCTTCEEEEEECTTSCCEEEEETTTEECTTCCTTEEEEEETTEEEEEECSCCGGGCEEEEEEECCSS
T ss_pred CCCCEEEEEEecCCCCceEEEEEECCCCCcEEEEEeCCccCCCCCccEEEecCCCEEEEEECCCChHHCEEEEEecCCCC
Confidence 4899999999998888999999842 1110 0 012369999999999999999999865
Q ss_pred CC---ceeEeeEEEeeecCCCeeeecCCccccCCCCcEEEEeEEcc-CCCCeEEEEECCEEccc
Q psy12725 58 ES---AQASGELKLGGRFDPPVIKESFSDETLNPGPNYYFKCIASG-NPTPEISWYLDGKKLVN 117 (119)
Q Consensus 58 ~~---~~~~~~~~v~~~~~~~~~~~~~~~~~~~~g~~~~l~C~~~~-~p~~~~~W~~~~~~~~~ 117 (119)
+. ......+.+.....+|.+...+....+..|+.+.|.|.+.+ .|.+.+.|+++|..+..
T Consensus 95 ~~~~~~~~~~~l~V~~~~~~p~v~~~~~~~~~~~g~~v~l~C~~~g~~P~~~v~W~k~g~~~~~ 158 (213)
T 3nl4_L 95 PTYVSFGGGTEVGVKGDPVAPTVLIFPPSADLVATGTVTIVCVANKYFPDVTVTWEVDGTTQTT 158 (213)
T ss_dssp TTTCEECCCEEEEEECCCBCCEEEEECCCHHHHTTSEEEEEEEEEEEBSCCEEEEEETTEECCS
T ss_pred ceeEEeCCCeEEEEeCCCcCCeEEEeCCchhhccCCcEeEEEEEecccCCcEEEEEeCCccCCC
Confidence 42 22233444433334666665554445667899999999988 78889999999998753
No 30
>1vca_A VCAM-D1,2, human vascular cell adhesion molecule-1; immunoglobulin superfamily, integrin-binding, cell adhesion protein; 1.80A {Homo sapiens} SCOP: b.1.1.3 b.1.1.4 PDB: 1ij9_A 1vsc_A
Probab=99.85 E-value=2e-20 Score=104.72 Aligned_cols=113 Identities=16% Similarity=0.207 Sum_probs=81.4
Q ss_pred CCccEEEEEEeccCCCCeeEEeeCC-ccCC-----CCCCCeEEEecCCCCCCeEEEEEEEcCCCCceeEeeEEEeeecCC
Q psy12725 1 MLALKFFTCKYEGNPVKTISWMKDG-KPVP-----DHNEPVFRIDSVRKEDKGMYQCVIRNEQESAQASGELKLGGRFDP 74 (119)
Q Consensus 1 ~g~~~~l~c~~~~~~~~~v~w~~~~-~~~~-----~~~~~~l~~~~~~~~d~g~y~C~~~~~~~~~~~~~~~~v~~~~~~ 74 (119)
.|+.+.|.|.+.|.|.+.+.|++.. ..+. ......|.|.+++.+|+|.|.|.+.+..+.....+.+.|. ..+
T Consensus 15 ~G~~v~L~C~~~g~P~p~i~W~~~~~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~n~~~~~~~~~~l~V~--~~p 92 (202)
T 1vca_A 15 IGDSVSLTCSTTGCESPFFSWRTQIDSPLNGKVTNEGTTSTLTMNPVSFGNEHSYLCTATCESRKLEKGIQVEIY--SFP 92 (202)
T ss_dssp TTSCEEEEEEEESCSSCEEEEEETTCCCCSSEEEEETTEEEEEESSCCGGGCSEEEEEEEETTEEEEEEEEEEEE--BCC
T ss_pred CCCcEEEEEeecCCCCCeEEEECCCCCCccceEEEcCCccEEEECcCCHHHCEEEEEEEEECCceEeeEEEEEEE--eCC
Confidence 4899999999998899999999842 2111 1133569999999999999999999986544334444443 333
Q ss_pred CeeeecCCccccCCCCcEEEEeEEccCCC---CeEEEEECCEEcc
Q psy12725 75 PVIKESFSDETLNPGPNYYFKCIASGNPT---PEISWYLDGKKLV 116 (119)
Q Consensus 75 ~~~~~~~~~~~~~~g~~~~l~C~~~~~p~---~~~~W~~~~~~~~ 116 (119)
..+...+. ..+.+|+.+.|.|.+.+.++ +.+.|++++..+.
T Consensus 93 ~~~~~~~~-~~~~~G~~~~L~C~~~~~~p~~~~~i~W~k~~~~l~ 136 (202)
T 1vca_A 93 KDPEIHLS-GPLEAGKPITVKCSVADVYPFDRLEIDLLKGDHLMK 136 (202)
T ss_dssp SCCEEEES-SCEETTSCEEEEEEEEEEBSGGGEEEEEEETTEEEE
T ss_pred CCCEeCCc-eEEcCCCCEEEEEEECCcCCCCCeEEEEEeCCeECc
Confidence 33333222 56789999999999987643 3699999998764
No 31
>3p2t_A Leukocyte immunoglobulin-like receptor subfamily 4; LILR, IG, inhibitory receptor, disulfide, immune system; 1.70A {Homo sapiens}
Probab=99.85 E-value=1.6e-20 Score=104.49 Aligned_cols=112 Identities=20% Similarity=0.265 Sum_probs=83.5
Q ss_pred CCccEEEEEEeccCCCCeeEEeeCCccCCC--------CCCCeEEEecCCCCCCeEEEEEEEcCCCCceeE--eeEEEee
Q psy12725 1 MLALKFFTCKYEGNPVKTISWMKDGKPVPD--------HNEPVFRIDSVRKEDKGMYQCVIRNEQESAQAS--GELKLGG 70 (119)
Q Consensus 1 ~g~~~~l~c~~~~~~~~~v~w~~~~~~~~~--------~~~~~l~~~~~~~~d~g~y~C~~~~~~~~~~~~--~~~~v~~ 70 (119)
.|+.|+|.|.+.+ +.+.+.|+|++..+.. .....|.|.+++.+|.|.|.|.+.+..+....+ ..+.+..
T Consensus 18 ~G~~v~L~C~~~~-~~~~~~w~k~g~~~~~~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~a~n~~g~~~~s~~~~l~V~~ 96 (196)
T 3p2t_A 18 WGNSVTIWCQGTL-EAREYRLDKEESPAPWDRQNPLEPKNKARFSIPSMTEDYAGRYRCYYRSPVGWSQPSDPLELVMTG 96 (196)
T ss_dssp TTCCEEEEEECCT-TCCEEEEEETTSCSCSEEECCCSSSSEEEEEESSCCGGGCEEEEEEEEETTEEBCCCCCEEEEEEC
T ss_pred CCCcEEEEeeCCC-CCCEEEEEECCCCCcccccccccCCceEEEEeccCCcccCceEEEEEeCCCcccCCCccEEEEecC
Confidence 4899999999987 6789999999877642 234679999999999999999999976522223 3444433
Q ss_pred ecCCCeeeecCCccccCCCCcEEEEeEEccCCCCeEEEEECCEEc
Q psy12725 71 RFDPPVIKESFSDETLNPGPNYYFKCIASGNPTPEISWYLDGKKL 115 (119)
Q Consensus 71 ~~~~~~~~~~~~~~~~~~g~~~~l~C~~~~~p~~~~~W~~~~~~~ 115 (119)
...+|.+...+.. .+.+|+.++|.|.+.+ +++.+.|+++|..+
T Consensus 97 ~~~~p~~~~~~~~-~v~~G~~v~L~C~~~~-~~~~~~w~k~g~~~ 139 (196)
T 3p2t_A 97 AYSKPTLSALPSP-LVTSGKSVTLLCQSRS-PMDTFLLCKERAAH 139 (196)
T ss_dssp SSCCCEEEEESCS-EECTTCCEEEEEEEEE-EEEEEEEEETTCCC
T ss_pred CCCCCEEEeCCcc-eecCCCeEEEEEecCC-CCCEEEEEeCCCcc
Confidence 2345666554433 5789999999999877 44589999998754
No 32
>1cs6_A Axonin-1; neural cell adhesion, cell adhesion; 1.80A {Gallus gallus} SCOP: b.1.1.4 b.1.1.4 b.1.1.4 b.1.1.4 PDB: 2om5_A
Probab=99.85 E-value=2.6e-20 Score=112.45 Aligned_cols=114 Identities=28% Similarity=0.555 Sum_probs=93.2
Q ss_pred CCccEEEEEEeccCCCCeeEEeeCCccCCC---CCCCeEEEecCCCCCCeEEEEEEEcCCCCceeEeeEEEeeecCCCee
Q psy12725 1 MLALKFFTCKYEGNPVKTISWMKDGKPVPD---HNEPVFRIDSVRKEDKGMYQCVIRNEQESAQASGELKLGGRFDPPVI 77 (119)
Q Consensus 1 ~g~~~~l~c~~~~~~~~~v~w~~~~~~~~~---~~~~~l~~~~~~~~d~g~y~C~~~~~~~~~~~~~~~~v~~~~~~~~~ 77 (119)
.|+.+.|.|.+.+.|.+.+.|++++..+.. .....|.|.+++.+|.|.|.|.+.+..+.......+.+. .+|.+
T Consensus 221 ~G~~v~l~C~~~g~p~~~i~W~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~l~V~---~~p~~ 297 (382)
T 1cs6_A 221 TGQMVTLECFAFGNPVPQIKWRKLDGSQTSKWLSSEPLLHIQNVDFEDEGTYECEAENIKGRDTYQGRIIIH---AQPDW 297 (382)
T ss_dssp TTCCEEEECEEEEESCCEEEEEECCSCCSCCCSBSSSEEEECSCCGGGCEEEEEEEEETTEEEEEEEEEEEE---EEEEE
T ss_pred CCCeEEEEEEEccCCCCEEEEEECCcccccEEecCCcEEEEccCChhhCEEEEEEEEcCCCeEEEEEEEEEe---cCCCc
Confidence 388999999999989999999998876543 346789999999999999999999987665555555553 35666
Q ss_pred eecCCccccCCCCcEEEEeEEccCCCCeEEEEECCEEccc
Q psy12725 78 KESFSDETLNPGPNYYFKCIASGNPTPEISWYLDGKKLVN 117 (119)
Q Consensus 78 ~~~~~~~~~~~g~~~~l~C~~~~~p~~~~~W~~~~~~~~~ 117 (119)
...+....+..|+.+.|.|.+.+.|.+.+.|+++|..+..
T Consensus 298 ~~~~~~~~~~~g~~~~l~C~~~g~p~p~v~W~~~g~~~~~ 337 (382)
T 1cs6_A 298 LDVITDTEADIGSDLRWSCVASGKPRPAVRWLRDGQPLAS 337 (382)
T ss_dssp EECCCCEEEETTCCEEEECEEEEESCCEEEEEETTEECCC
T ss_pred ccCCCccEEcCCCeEEEEEEeeeecCCEEEEEECCEECCC
Confidence 6555566778999999999999999999999999998764
No 33
>2v5m_A Dscam; neurobiology SPL immunoglobulin domain, cell adhesion, membrane, development protein; HET: NAG; 1.95A {Drosophila melanogaster} PDB: 2v5s_A* 2v5r_A*
Probab=99.85 E-value=1.4e-20 Score=113.76 Aligned_cols=114 Identities=25% Similarity=0.403 Sum_probs=91.1
Q ss_pred CCccEEEEEEeccCCCCeeEEeeCCccCCC-----------CCCCeEEEecCCCCCCeEEEEEEEcCCCCceeEeeEEEe
Q psy12725 1 MLALKFFTCKYEGNPVKTISWMKDGKPVPD-----------HNEPVFRIDSVRKEDKGMYQCVIRNEQESAQASGELKLG 69 (119)
Q Consensus 1 ~g~~~~l~c~~~~~~~~~v~w~~~~~~~~~-----------~~~~~l~~~~~~~~d~g~y~C~~~~~~~~~~~~~~~~v~ 69 (119)
.|+.+.|.|.+.+.|.+.+.|++++..... .....|.|..++..|.|.|.|.+.|..+.......+.+.
T Consensus 226 ~G~~v~l~C~~~g~p~p~v~W~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~n~~g~~~~~~~l~V~ 305 (388)
T 2v5m_A 226 VAHTISLLCPAQGFPAPSFRWYKFIEGTTRKQAVVLNDRVKQVSGTLIIKDAVVEDSGKYLCVVNNSVGGESVETVLTVT 305 (388)
T ss_dssp TTSCEEECCCCEEESCCEEEEEEECTTSSCEEECCCSSSEEEETTEEEESSCCGGGCEEEEEEEECSSCEEEEEEEEEEE
T ss_pred eCCcEEEEEECCCCCCCEEEEEecCCCCcccccccccCceecccCEEEECcCCHHHCeEEEEEEecCCCceeEEEEEEEe
Confidence 388999999999889999999997543211 124689999999999999999999987765555555554
Q ss_pred eecCCCeeeecCCccccCCCCcEEEEeEEccCCCCeEEEEECCEEccc
Q psy12725 70 GRFDPPVIKESFSDETLNPGPNYYFKCIASGNPTPEISWYLDGKKLVN 117 (119)
Q Consensus 70 ~~~~~~~~~~~~~~~~~~~g~~~~l~C~~~~~p~~~~~W~~~~~~~~~ 117 (119)
.+|.+...+....+..|+.+.|.|.+.+.|.+.+.|+++|..+..
T Consensus 306 ---~~p~~~~~~~~~~v~~g~~~~l~C~~~g~p~p~i~W~~~g~~i~~ 350 (388)
T 2v5m_A 306 ---APLSAKIDPPTQTVDFGRPAVFTCQYTGNPIKTVSWMKDGKAIGH 350 (388)
T ss_dssp ---EEEEEEEESSEEEECTTSCEEEEEEEEEECCCEEEEEETTEECSC
T ss_pred ---CCCccccCCCcEEecCCCCEEEEEEeccccCCeEEEEECCEECcc
Confidence 345555556666788999999999999999999999999998764
No 34
>3laf_A Deleted in colorectal cancer; netrin-1 receptor, immunoglobulin superfamily, horseshoe, AP; HET: NAG BMA; 2.40A {Rattus norvegicus}
Probab=99.85 E-value=2.5e-20 Score=113.06 Aligned_cols=114 Identities=24% Similarity=0.473 Sum_probs=93.8
Q ss_pred CCccEEEEEEeccCCCCeeEEeeCCccCCCC-------CCCeEEEecCCCCCCeEEEEEEEcCCCCceeEeeEEEeeecC
Q psy12725 1 MLALKFFTCKYEGNPVKTISWMKDGKPVPDH-------NEPVFRIDSVRKEDKGMYQCVIRNEQESAQASGELKLGGRFD 73 (119)
Q Consensus 1 ~g~~~~l~c~~~~~~~~~v~w~~~~~~~~~~-------~~~~l~~~~~~~~d~g~y~C~~~~~~~~~~~~~~~~v~~~~~ 73 (119)
.|+.+.|.|.+.+.|.+.+.|++++..+... ....|.|..++..|.|.|.|.+.+..+.......+.+. .
T Consensus 235 ~g~~~~l~C~~~~~p~~~~~W~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~l~V~---~ 311 (403)
T 3laf_A 235 EGKDAVLECCVSGYPPPSFTWLRGEEVIQLRSKKYSLLGGSNLLISNVTDDDSGTYTCVVTYKNENISASAELTVL---V 311 (403)
T ss_dssp TTSCEEECCEEEEESCCEEEEEETTEECCCSSSSEEEETTTEEEECSCCGGGCEEEEEEEEETTEEEEEEEEEEEE---E
T ss_pred CCCcEEEEEEcCCCCCCeEEEEECCeeccCCCceEEECCccEEEEeCCCHHHCEEEEEEEEcCCCceEEEEEEEEE---C
Confidence 3889999999999898999999998876532 24679999999999999999999987655555555554 3
Q ss_pred CCeeeecCCccccCCCCcEEEEeEEccCCCCeEEEEECCEEccc
Q psy12725 74 PPVIKESFSDETLNPGPNYYFKCIASGNPTPEISWYLDGKKLVN 117 (119)
Q Consensus 74 ~~~~~~~~~~~~~~~g~~~~l~C~~~~~p~~~~~W~~~~~~~~~ 117 (119)
+|.+...+....+.+|+.+.|.|.+.+.|.+.+.|+++|..+..
T Consensus 312 ~p~~~~~~~~~~~~~g~~v~l~C~~~g~p~p~v~W~~~g~~~~~ 355 (403)
T 3laf_A 312 PPWFLNHPSNLYAYESMDIEFECAVSGKPVPTVNWMKNGDVVIP 355 (403)
T ss_dssp EEEEEECCCCEECCTTCCEEECCEEEEESCCEEEEEETTEECCC
T ss_pred CCcEeecCcceEEecCCeEEEEEEEeeccCCEEEEEECCEECCC
Confidence 56666666666788999999999999999999999999988753
No 35
>3qs7_E FL cytokine receptor; immunoglobulin-like domain, four-helical bundle cytokine, CY receptor complex, extracellular complex; HET: NAG; 4.30A {Homo sapiens}
Probab=99.85 E-value=2.2e-20 Score=114.55 Aligned_cols=111 Identities=16% Similarity=0.278 Sum_probs=85.9
Q ss_pred CCccEEEEEEecc-CCCCeeEEeeCCccCCCC---------C------CCeEEEecCCCCCCeEEEEEEEcCCCCceeEe
Q psy12725 1 MLALKFFTCKYEG-NPVKTISWMKDGKPVPDH---------N------EPVFRIDSVRKEDKGMYQCVIRNEQESAQASG 64 (119)
Q Consensus 1 ~g~~~~l~c~~~~-~~~~~v~w~~~~~~~~~~---------~------~~~l~~~~~~~~d~g~y~C~~~~~~~~~~~~~ 64 (119)
.|+.+.|.|.+.+ .|.+.+.|++++..+... . ...|.|..++.+|.|.|+|.+.|. .....
T Consensus 241 ~G~~v~L~C~~~g~~p~p~i~W~k~g~~l~~~~~~~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~A~N~---~~~~~ 317 (423)
T 3qs7_E 241 VGEPLWIRCKAVHVNHGFGLTWELENKALEEGNYFEMSTYSTNRTMIRILFAFVSSVARNDTGYYTCSSSKH---PSQSA 317 (423)
T ss_dssp TTSCEEEEEEEEESSSCCCEEEEESSSBCCGGGEEEEEEEETTTEEEEEEEEEESSCCTTTCEEEEEEETTE---EEEEE
T ss_pred CCCeEEEEEEEEcCCCCcEEEEEECCEEccccceeecccccCCceeEEEEEEEEeecCHHHCEEEEEEEecC---CCceE
Confidence 4899999999998 567899999998876431 1 136999999999999999999987 33344
Q ss_pred eEEEeeecCCCeeeecC--CccccCCCCcEEEEeEEccCCCCeEEEEECCEEccc
Q psy12725 65 ELKLGGRFDPPVIKESF--SDETLNPGPNYYFKCIASGNPTPEISWYLDGKKLVN 117 (119)
Q Consensus 65 ~~~v~~~~~~~~~~~~~--~~~~~~~g~~~~l~C~~~~~p~~~~~W~~~~~~~~~ 117 (119)
.+.|. .+|.+...+ ....+.+|+.+.|.|.+.+.|.|.+.|+|+|..+..
T Consensus 318 ~L~V~---~~p~i~~~~~~~~~~v~~G~~v~l~C~~~g~P~p~i~W~k~g~~l~~ 369 (423)
T 3qs7_E 318 LVTIV---EKGFINATNSSEDYEIDQYEEFCFSVRFKAYPQIRCTWTFSRKSFPC 369 (423)
T ss_dssp EEEEE---SSCEEEEC---CEECCCTTCCCCEEEEEEEESCCEEEEEETTEEEEC
T ss_pred EEEEE---eCCcceEcCCCccEEecCCCeEEEEEEEEEcCCCeEEEEECCEECCC
Confidence 44443 355554433 244577899999999999999999999999998854
No 36
>2va4_A NCAM2, N-CAM 2, neural cell adhesion molecule 2; transmembrane, phosphorylation, immunoglobulin domain, membrane, glycoprotein; HET: NAG; 1.9A {Homo sapiens} PDB: 2xy1_A*
Probab=99.85 E-value=5.9e-20 Score=101.51 Aligned_cols=112 Identities=25% Similarity=0.463 Sum_probs=86.8
Q ss_pred CCccEEEEEEeccCCCCeeEEeeCCccCCCC-------CCCeEEEecCCCCCCeEEEEEEEcCCCCceeEeeEEEeeecC
Q psy12725 1 MLALKFFTCKYEGNPVKTISWMKDGKPVPDH-------NEPVFRIDSVRKEDKGMYQCVIRNEQESAQASGELKLGGRFD 73 (119)
Q Consensus 1 ~g~~~~l~c~~~~~~~~~v~w~~~~~~~~~~-------~~~~l~~~~~~~~d~g~y~C~~~~~~~~~~~~~~~~v~~~~~ 73 (119)
.|+.+.|.|.+.+.|.+.+.|++++..+... ....|.|.+++..|.|.|.|.+.+..+.......+.+. .
T Consensus 18 ~G~~v~l~C~~~~~p~~~v~W~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~~~~~~~~~~~~~~l~V~---~ 94 (192)
T 2va4_A 18 RGEEMTFSCRASGSPEPAISWFRNGKLIEENEKYILKGSNTELTVRNIINSDGGPYVCRATNKAGEDEKQAFLQVF---V 94 (192)
T ss_dssp SCCCEEEECEEECSSCCEEEEEETTEECCCSSSEEEETTTTEEEECSCCGGGCEEEEEEEEETTEEEEEEEEEEEE---E
T ss_pred cCCCEEEEEeeccCCCCeEEEEECCeEcCCCccEEEeCCeeEEEEecCChhcCcEEEEEEEccccccceEEEEEEE---c
Confidence 4899999999998888999999999877543 34679999999999999999999876554444444443 2
Q ss_pred CCeeeecCCccccCCCCcEEEEeEEccCCCCeEEEEEC--CEEcc
Q psy12725 74 PPVIKESFSDETLNPGPNYYFKCIASGNPTPEISWYLD--GKKLV 116 (119)
Q Consensus 74 ~~~~~~~~~~~~~~~g~~~~l~C~~~~~p~~~~~W~~~--~~~~~ 116 (119)
+|.+...+ ...+..|+.+.|.|.+.+.|.+.+.|+++ +..+.
T Consensus 95 ~p~~~~~~-~~~~~~g~~v~l~C~~~~~p~~~v~W~~~~~~~~~~ 138 (192)
T 2va4_A 95 QPHIIQLK-NETTYENGQVTLVCDAEGEPIPEITWKRAVDGFTFT 138 (192)
T ss_dssp EEEEEEEC-CEEECTTSEEEEEEEEEEESCCEEEEEETTTTEEEC
T ss_pred cCcccccC-cceEEeCCeEEEEEEecCCCCCcEEEEeCCCCceee
Confidence 44444333 33466799999999999999999999998 55543
No 37
>3rbs_A Myomesin-1; immunoglobulin C-SET domain, contractIle protein; 1.85A {Homo sapiens}
Probab=99.85 E-value=4.6e-20 Score=103.64 Aligned_cols=113 Identities=18% Similarity=0.265 Sum_probs=83.0
Q ss_pred CccEEEEEEecc-CCCCeeEEeeCCccCCCCC-----------CCeEEEecCCCCCCeEEEEEEEcCCCCceeEeeEEEe
Q psy12725 2 LALKFFTCKYEG-NPVKTISWMKDGKPVPDHN-----------EPVFRIDSVRKEDKGMYQCVIRNEQESAQASGELKLG 69 (119)
Q Consensus 2 g~~~~l~c~~~~-~~~~~v~w~~~~~~~~~~~-----------~~~l~~~~~~~~d~g~y~C~~~~~~~~~~~~~~~~v~ 69 (119)
|+.+.|.|.+.. .|.+.|.|++|+..+.... ...|.|.+++.+|+|.|+|.+.|. .......+.+.
T Consensus 17 g~~v~l~c~~~~~~P~p~i~W~kng~~l~~~~~~~~~~~~~~g~~~L~I~~v~~~D~G~Y~C~a~Ng--~a~~~~~~~~~ 94 (207)
T 3rbs_A 17 KGQVRFWMQAEKLSGNAKVNYIFNEKEIFEGPKYKMHIDRNTGIIEMFMEKLQDEDEGTYTFQLQDG--KATNHSTVVLV 94 (207)
T ss_dssp GGCEEEEEECSCCCSCCEEEEEETTEEECSSSSCEEEECTTTCEEEEEESCCCGGGCEEEEEEEEET--TEEEEEEEEEC
T ss_pred CCeEEEEEEEecCCCCCEEEEEECCEECccCCCEEEEEeCCCCEEEEEECCCChhhCEEEEEEEECC--CeEEEEEEEEE
Confidence 788999999964 5899999999998874321 125899999999999999999983 22222222210
Q ss_pred e------------------ecCCCeeeecCCccccCCCCcEEEEeEEccC-CCCeEEEEECCEEccc
Q psy12725 70 G------------------RFDPPVIKESFSDETLNPGPNYYFKCIASGN-PTPEISWYLDGKKLVN 117 (119)
Q Consensus 70 ~------------------~~~~~~~~~~~~~~~~~~g~~~~l~C~~~~~-p~~~~~W~~~~~~~~~ 117 (119)
. ...+|.+...+ ...+.+|+.+.|.|.+.+. |.|.+.|+|+|..+..
T Consensus 95 ~~~~~~~~~~~~~~~~~~~~~~~P~~~~~~-~~~v~~g~~v~l~C~v~g~~P~p~i~W~k~g~~l~~ 160 (207)
T 3rbs_A 95 GDVFKKLQKEAEFQRQEWIRKQGPHFVEYL-SWEVTGECNVLLKCKVANIKKETHIVWYKDEREISV 160 (207)
T ss_dssp THHHHHHHHHHHHHHHHHHHHTSSEEEEEE-EEEEETTTEEEEEEEEESCCTTCEEEEEETTEEECC
T ss_pred ccchhhhcccccccccccccCCCCceEecC-CcEEcCCCcEEEEEEEeCCCCCCEEEEEECCEECCC
Confidence 0 00245554433 3467789999999999998 8999999999998854
No 38
>1ugn_A LIR1, leukocyte immunoglobulin-like receptor 1; immunoglobulin-like folds, immune system; 1.80A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 PDB: 3d2u_D* 1g0x_A 1p7q_D 1ufu_A 1vdg_A 2gw5_A 2dyp_D 2otp_A 3q2c_A
Probab=99.85 E-value=3.4e-20 Score=103.31 Aligned_cols=112 Identities=17% Similarity=0.251 Sum_probs=80.8
Q ss_pred CCccEEEEEEeccCCCCeeEEeeCCccCC--------CCCCCeEEEecCCCCCCeEEEEEEEcCC-C--CceeEeeEEEe
Q psy12725 1 MLALKFFTCKYEGNPVKTISWMKDGKPVP--------DHNEPVFRIDSVRKEDKGMYQCVIRNEQ-E--SAQASGELKLG 69 (119)
Q Consensus 1 ~g~~~~l~c~~~~~~~~~v~w~~~~~~~~--------~~~~~~l~~~~~~~~d~g~y~C~~~~~~-~--~~~~~~~~~v~ 69 (119)
.|+.++|.|.+.+.+. .+.|+|++..+. ......|.|.+++..|.|.|.|.+.+.. + .......+.+.
T Consensus 18 ~G~~v~L~C~~~~~~~-~~~W~k~g~~~~~~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~a~n~~~g~~~~s~~~~l~V~ 96 (198)
T 1ugn_A 18 QGSPVTLRCQGGQETQ-EYRLYREKKTAPWITRIPQELVKKGQFPIPSITWEHTGRYRCYYGSDTAGRSESSDPLELVVT 96 (198)
T ss_dssp TTCCEEEEEECCTTCC-CEEEEESSSCCHHHHTSCHHHHTTTEEEESSCCGGGCEEEEEEEEETTTEECCCCCCEEEEEE
T ss_pred CCCcEEEEEEecCCCc-EEEEEECCccccccccccccCCcccEEEECCCCHHHCeEEEEEEECCCCCcccCCccEEEEEc
Confidence 4899999999988765 699999987662 1246789999999999999999999875 3 22223444443
Q ss_pred eecCCCeeeecCCccccCCCCcEEEEeEEccCCCCeEEEEECCEEc
Q psy12725 70 GRFDPPVIKESFSDETLNPGPNYYFKCIASGNPTPEISWYLDGKKL 115 (119)
Q Consensus 70 ~~~~~~~~~~~~~~~~~~~g~~~~l~C~~~~~p~~~~~W~~~~~~~ 115 (119)
....+|.+...+ ...+.+|+.+.|.|.+.+. .+.+.|+++|..+
T Consensus 97 ~~~~~p~i~~~~-~~~v~~G~~v~L~C~~~~~-~~~v~W~k~g~~~ 140 (198)
T 1ugn_A 97 GAYIKPTLSAQP-SPVVNSGGNVTLQCDSQVA-FDGFILCKEGEDE 140 (198)
T ss_dssp CSSCCCEEEEES-CSEEETTCCEEEEEECSSC-CSEEEEEEC----
T ss_pred ccccCCccccCC-ccccCCCCcEEEEEecCCC-CcEEEEEECCCcc
Confidence 322345555443 3467899999999999887 7799999998865
No 39
>1qz1_A Neural cell adhesion molecule 1, 140 kDa isoform; IG modules, NCAM; 2.00A {Rattus norvegicus} SCOP: b.1.1.4 b.1.1.4 b.1.1.4 PDB: 1ie5_A
Probab=99.85 E-value=7.2e-20 Score=106.90 Aligned_cols=116 Identities=25% Similarity=0.409 Sum_probs=88.0
Q ss_pred CCccEEEEEEeccCCCCeeEEeeCCccCCC--------CCCCeEEEecCCCCCCeEEEEEEEcCCCCceeEeeEEEeeec
Q psy12725 1 MLALKFFTCKYEGNPVKTISWMKDGKPVPD--------HNEPVFRIDSVRKEDKGMYQCVIRNEQESAQASGELKLGGRF 72 (119)
Q Consensus 1 ~g~~~~l~c~~~~~~~~~v~w~~~~~~~~~--------~~~~~l~~~~~~~~d~g~y~C~~~~~~~~~~~~~~~~v~~~~ 72 (119)
.|+.+.|.|.+.+.|.+.+.|++++..+.. .....|.|..++..|.|.|.|.+.+..........+.+.+.
T Consensus 114 ~g~~v~l~C~~~~~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~n~~~~~~~~~~~~l~v~- 192 (291)
T 1qz1_A 114 EGEDAVIVCDVVSSLPPTIIWKHKGRDVILKKDVRFIVLSNNYLQIRGIKKTDEGTYRCEGRILARGEINFKDIQVIVN- 192 (291)
T ss_dssp TTSCEEECCEEECSSCCEEEEEETTSCSSTTCCTTEEECTTSCEEETTCCGGGCEEEEEEEEEGGGTEEEEEEEEEEEE-
T ss_pred CCCeEEEEEEeccCCCCEEEEEECCEEcccCCCceEEEccCCcEEEccCccccCeEEEEEEEecCCCceeeEEEEEEEe-
Confidence 488999999999989899999999877643 23467999999999999999999986433222333333332
Q ss_pred CCCeeeecCC--ccccCCCCcEEEEeEEccCCCCeEEEEECCEEccc
Q psy12725 73 DPPVIKESFS--DETLNPGPNYYFKCIASGNPTPEISWYLDGKKLVN 117 (119)
Q Consensus 73 ~~~~~~~~~~--~~~~~~g~~~~l~C~~~~~p~~~~~W~~~~~~~~~ 117 (119)
.+|.+..... ...+..|+.+.|.|.+.+.|.|.+.|+++|..+..
T Consensus 193 ~~p~~~~~~~~~~~~~~~g~~v~l~C~~~g~p~p~i~W~~~g~~~~~ 239 (291)
T 1qz1_A 193 VPPTVQARQSIVNATANLGQSVTLVCDADGFPEPTMSWTKDGEPIEN 239 (291)
T ss_dssp EEEEEEESCSEEEEETTSCCCEEEEEEEEEESCCEEEEEETTEECCC
T ss_pred cCCcccccccccccccccCceEEEEEEEEEeCCCcEEEEECCEECcC
Confidence 2455544322 34578899999999999999999999999998764
No 40
>3grw_A Fibroblast growth factor receptor 3; FGFR3, protein-protein complex, receptor tyrosine kinas binding, immunoglobulin domain, kinase, membrane, nucleotid binding; HET: NAG; 2.10A {Homo sapiens}
Probab=99.85 E-value=5.8e-20 Score=104.82 Aligned_cols=116 Identities=27% Similarity=0.516 Sum_probs=88.0
Q ss_pred CCccEEEEEEeccCCCCeeEEeeCCccCCCC----------CCCeEEEecCCCCCCeEEEEEEEcCCCCceeEeeEEEee
Q psy12725 1 MLALKFFTCKYEGNPVKTISWMKDGKPVPDH----------NEPVFRIDSVRKEDKGMYQCVIRNEQESAQASGELKLGG 70 (119)
Q Consensus 1 ~g~~~~l~c~~~~~~~~~v~w~~~~~~~~~~----------~~~~l~~~~~~~~d~g~y~C~~~~~~~~~~~~~~~~v~~ 70 (119)
.|+.+.|.|.+.+.|.+.+.|++++..+... ....|.|.+++..|.|.|.|.+.+..+.......+.+..
T Consensus 29 ~G~~v~L~C~~~~~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~~~~~~~~~~~~~~l~V~~ 108 (241)
T 3grw_A 29 AANTVRFRCPAAGNPTPSISWLKNGREFRGEHRIGGIKLRHQQWSLVMESVVPSDRGNYTCVVENKFGSIRQTYTLDVLE 108 (241)
T ss_dssp TTSEEEEECCEECSSCCEEEEEETTEECCGGGSTTCCEEEGGGTEEEECSCCGGGCEEEEEEEEETTEEEEEEEEEEEEC
T ss_pred CCCeEEEEEEecCCCCceeEEEECCcccCCCCcccceeeeccceEEEEEeCCcccCEEEEEEEeecCCceEEEEEEEEec
Confidence 4899999999999888999999998776432 235799999999999999999999766555555555543
Q ss_pred ec-CCCeeee-cCCccccCCCCcEEEEeEEccCCCCeEEEEE----CCEEcc
Q psy12725 71 RF-DPPVIKE-SFSDETLNPGPNYYFKCIASGNPTPEISWYL----DGKKLV 116 (119)
Q Consensus 71 ~~-~~~~~~~-~~~~~~~~~g~~~~l~C~~~~~p~~~~~W~~----~~~~~~ 116 (119)
.. .+|.+.. .+....+..|+.+.|.|.+.+.|.+.+.|++ ++..+.
T Consensus 109 ~~~~~~~~~~~~~~~~~~~~g~~v~L~C~~~~~p~p~v~W~~~~~~~g~~~~ 160 (241)
T 3grw_A 109 RSPHRPILQAGLPANQTAVLGSDVEFHCKVYSDAQPHIQWLKHVEVNGSKVG 160 (241)
T ss_dssp CCCCCCEEEECTTCSEECCTTCCEEEEEEEECSSCCEEEEEEECCSSSCSSC
T ss_pred cCCCCceeecCCCccceecCCCEEEEEEEEecCCCCEEEEEEcccCCCcccC
Confidence 21 1233322 2344567889999999999999999999999 666553
No 41
>1f97_A Junction adhesion molecule; immunoglobulin superfamily, beta-sandwich fold, cell adhesion; 2.50A {Mus musculus} SCOP: b.1.1.1 b.1.1.4
Probab=99.84 E-value=2.9e-20 Score=104.12 Aligned_cols=115 Identities=22% Similarity=0.375 Sum_probs=86.0
Q ss_pred CCccEEEEEEeccCCCCeeEEeeCCccCC------------CC-----CCCeEEEecCCCCCCeEEEEEEEcCCCCceeE
Q psy12725 1 MLALKFFTCKYEGNPVKTISWMKDGKPVP------------DH-----NEPVFRIDSVRKEDKGMYQCVIRNEQESAQAS 63 (119)
Q Consensus 1 ~g~~~~l~c~~~~~~~~~v~w~~~~~~~~------------~~-----~~~~l~~~~~~~~d~g~y~C~~~~~~~~~~~~ 63 (119)
.|+.+.|.|.+.+.|.+.+.|++++..+. .. ....|.|.+++..|.|.|.|.+.+..+.....
T Consensus 15 ~G~~v~L~C~~~~~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~L~i~~v~~~D~G~Y~C~~~~~~g~~~~~ 94 (212)
T 1f97_A 15 ENESIKLTCTYSGFSSPRVEWKFVQGSTTALVCYNSQITAPYADRVTFSSSGITFSSVTRKDNGEYTCMVSEEGGQNYGE 94 (212)
T ss_dssp TTCCEEEECEEESCSSEEEEEEEEETTEEEEEEETTEECGGGTTTEEEETTEEEESCCCGGGCEEEEEEEEETTSSSEEE
T ss_pred cCCCEEEEeEeCCCCCcEEEEEECCCceeeEEecCCcccccccCcEEeeceeEEEcccCcccCeEEEEEEEccCCCcccE
Confidence 48999999999988889999999775520 01 23679999999999999999999976533334
Q ss_pred eeEEEeeecCCCeeeecCCccccCCCCcEEEEeE-EccCCCCeEEEEECCE-Ecc
Q psy12725 64 GELKLGGRFDPPVIKESFSDETLNPGPNYYFKCI-ASGNPTPEISWYLDGK-KLV 116 (119)
Q Consensus 64 ~~~~v~~~~~~~~~~~~~~~~~~~~g~~~~l~C~-~~~~p~~~~~W~~~~~-~~~ 116 (119)
..+.+.+. .+|.+...+....+..|+.+.|.|. +.+.|.+.+.|++++. .+.
T Consensus 95 ~~~~l~V~-~~p~~~~~~~~~~~~~g~~~~l~C~~~~~~p~~~i~W~~~~~~~l~ 148 (212)
T 1f97_A 95 VSIHLTVL-VPPSKPTISVPSSVTIGNRAVLTCSEHDGSPPSEYSWFKDGISMLT 148 (212)
T ss_dssp EEEEEEEE-BCCCCCEEECCSEEETTSCEEEEEECSCCBSCCEEEEEETTEESBC
T ss_pred EEEEEEEE-cCCCCcccCCccccCCCCeEEEEEEcccCcCCCEEEEEeCCccccc
Confidence 44444443 2444433333456788999999999 7888999999999998 654
No 42
>1jbj_A CD3 epsilon and gamma ectodomain fragment complex; beta-sheet, C2-SET immunoglobulin superfamily, H-bonded G strand PAIR, single-chain; NMR {Mus musculus} SCOP: b.1.1.4 b.1.1.4 PDB: 1xmw_A
Probab=99.84 E-value=1.3e-20 Score=104.28 Aligned_cols=110 Identities=16% Similarity=0.319 Sum_probs=79.7
Q ss_pred CccEEEEEEeccCCCCeeEEeeCCccCCCCCCCeEEEec-CCCCCCeEEEEEEEcCCCCceeEeeEEEeeecCCC-----
Q psy12725 2 LALKFFTCKYEGNPVKTISWMKDGKPVPDHNEPVFRIDS-VRKEDKGMYQCVIRNEQESAQASGELKLGGRFDPP----- 75 (119)
Q Consensus 2 g~~~~l~c~~~~~~~~~v~w~~~~~~~~~~~~~~l~~~~-~~~~d~g~y~C~~~~~~~~~~~~~~~~v~~~~~~~----- 75 (119)
|+.+.|.|.+.+ + +.+.|+|++..+....+..|.|.+ ++.+|+|.|.|.+.+..+.......+.+.....+.
T Consensus 14 G~~v~L~C~~~~-~-~~i~W~k~g~~l~~~~~~~L~I~~~~~~~D~G~Y~C~a~n~~g~~~~~~~~~v~~~~~~~~~~~~ 91 (186)
T 1jbj_A 14 GTSVELTCPLDS-D-ENLKWEKNGQELPQKHDKHLVLQDFSEVEDSGYYVCYTPASNKNTYLYLKARVGSADDAKKDAAK 91 (186)
T ss_dssp TTEEEEECSSCC-C-TTCEEEETTEEECSCCCSEEEEESCCTTTSCEEEEEECSSCCCCCCEEECCCCCSCCCCCCCCCC
T ss_pred CcEEEEEEeCCC-C-CceEEEECCEECCCCCCCEEEECCCCccccCEEEEEEEEeCCCcEEEEEEEEEeccccccccccc
Confidence 899999999987 4 359999999998765678999999 99999999999999987654333433332211111
Q ss_pred ----------eeeecCC----c---cccCCCCcEEEEeEEccCCCCeEEEEECCEEcc
Q psy12725 76 ----------VIKESFS----D---ETLNPGPNYYFKCIASGNPTPEISWYLDGKKLV 116 (119)
Q Consensus 76 ----------~~~~~~~----~---~~~~~g~~~~l~C~~~~~p~~~~~W~~~~~~~~ 116 (119)
.+..... . ..+..|+.+.|.|.+ |.|.+.|+|+|..+.
T Consensus 92 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~v~l~C~~---p~p~i~W~k~g~~i~ 146 (186)
T 1jbj_A 92 KDDAKKDDAKKDGSQTNKAKNLVQVDGSRGDGSVLLTCGL---TDKTIKWLKDGSIIS 146 (186)
T ss_dssp CCCCSCCSSSTTCCSCCCCSSCCEECCCSSSCEEEEECSS---SCSCEEEEETTEECC
T ss_pred ccccccCCccccccccccccccccceecCCCCeEEEEeeC---CCCeEEEEECCEECc
Confidence 0000000 0 123489999999987 788999999999886
No 43
>2r15_A Myomesin-1; sarcomeric protein, IG-like domains, homodimer, immunoglobul domain, muscle protein, thick filament, contractIle protein; 2.24A {Homo sapiens}
Probab=99.84 E-value=5.7e-20 Score=103.04 Aligned_cols=116 Identities=18% Similarity=0.264 Sum_probs=83.2
Q ss_pred CccEEEEEEeccC-CCCeeEEeeCCccCCCCCC---------CeEEEecCCCCCCeEEEEEEEcCCCCceeEeeEEEee-
Q psy12725 2 LALKFFTCKYEGN-PVKTISWMKDGKPVPDHNE---------PVFRIDSVRKEDKGMYQCVIRNEQESAQASGELKLGG- 70 (119)
Q Consensus 2 g~~~~l~c~~~~~-~~~~v~w~~~~~~~~~~~~---------~~l~~~~~~~~d~g~y~C~~~~~~~~~~~~~~~~v~~- 70 (119)
|+.+.|.|.+.+. |.+.+.|++++..+....+ ..|.|.+++.+|.|.|.|.+.+..+.......+.+..
T Consensus 17 ~~~~~l~C~~~~~~p~~~i~W~~~g~~i~~~~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~~~n~~~~~~~~~~l~v~~~ 96 (212)
T 2r15_A 17 AEGIQLYSFVTYYVEDLKVNWSHNGSAIRYSDRVKTGVTGEQIWLQINEPTPNDKGKYVMELFDGKTGHQKTVDLSGQAY 96 (212)
T ss_dssp SSEEEEEEEBSSCCSSCEEEEEETTEECCCCSSEEEEEETTEEEEEEESCCGGGCEEEEEEEECSSCEEEEEEEECHHHH
T ss_pred CceEEEEEEEeccCCCceEEEEECCEEccCCCeEEEEEeCCEEEEEECCCCcccCEEEEEEEecCCcceEEEEEEEEeec
Confidence 4566777777764 5789999999987754321 3489999999999999999999765443333332210
Q ss_pred -----------------ecCCCeeeecCCccccCCCCcEEEEeEEccCCCCeEEEEECCEEccc
Q psy12725 71 -----------------RFDPPVIKESFSDETLNPGPNYYFKCIASGNPTPEISWYLDGKKLVN 117 (119)
Q Consensus 71 -----------------~~~~~~~~~~~~~~~~~~g~~~~l~C~~~~~p~~~~~W~~~~~~~~~ 117 (119)
...++.+...+....+..|+.+.|.|.+.+.|.|.+.|++++..+..
T Consensus 97 ~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~v~~g~~~~l~C~~~g~p~p~v~W~~~~~~~~~ 160 (212)
T 2r15_A 97 DEAYAEFQRLKQAAIAEKNRARVLGGLPDVVTIQEGKALNLTCNVWGDPPPEVSWLKNEKALAQ 160 (212)
T ss_dssp HHHHHHHHHHHHHHHHHHHSCEEEEBCCSEEEEETTCCEEEEEEEECSSCCEEEEEETTEEECC
T ss_pred cchhhhccccCcccccccCCCcccccCCCcEEEccCCeEEEEEEEcCCCCceEEEEECCeECcc
Confidence 00223333334445678999999999999999999999999988764
No 44
>2nzi_A Titin; IG-domain, FNIII-domain, transferase; 2.90A {Homo sapiens}
Probab=99.84 E-value=6.1e-20 Score=107.86 Aligned_cols=114 Identities=25% Similarity=0.392 Sum_probs=87.4
Q ss_pred CCccEEEEEEeccCCCCeeEEeeCCccCCCCC---------C--CeEEEecCCCCCCeEEEEEEEcCCCCceeEeeEEEe
Q psy12725 1 MLALKFFTCKYEGNPVKTISWMKDGKPVPDHN---------E--PVFRIDSVRKEDKGMYQCVIRNEQESAQASGELKLG 69 (119)
Q Consensus 1 ~g~~~~l~c~~~~~~~~~v~w~~~~~~~~~~~---------~--~~l~~~~~~~~d~g~y~C~~~~~~~~~~~~~~~~v~ 69 (119)
.|+.+.|.|.+.+.|.+.+.|++++..+.... . ..|.|.+++..|.|.|.|.+.+..+.......+.+.
T Consensus 18 ~G~~v~l~C~~~g~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~n~~g~~~~~~~l~V~ 97 (305)
T 2nzi_A 18 YQSNATLVCKVTGHPKPIVKWYRQGKEIIADGLKYRIQEFKGGYHQLIIASVTDDDATVYQVRATNQGGSVSGTASLEVE 97 (305)
T ss_dssp TTCCEEEEEEEECSSCCEEEEEETTEECCCCSSSEEEEEETTTEEEEEESSCCGGGCSEEEEEEEETTEEEEEEEEEEEC
T ss_pred CCCcEEEEEEEeCCCCCeEEEEECCEEcccCCCeEEEEECCCCEEEEEEccCChhhCeEEEEEEEcCCCCccceEEEEEe
Confidence 48999999999998999999999988765321 1 279999999999999999999986655445555553
Q ss_pred eecCCCeee-----ecCCccccCCCCcEEEEeEEccCCCCeEEEEECCEEccc
Q psy12725 70 GRFDPPVIK-----ESFSDETLNPGPNYYFKCIASGNPTPEISWYLDGKKLVN 117 (119)
Q Consensus 70 ~~~~~~~~~-----~~~~~~~~~~g~~~~l~C~~~~~p~~~~~W~~~~~~~~~ 117 (119)
. +|.+. ..+....+..|+.+.|.|.+.+.|.+.+.|++++..+..
T Consensus 98 ~---~p~~~~~~~~~~~~~~~~~~g~~~~l~C~~~g~p~p~i~W~~~~~~~~~ 147 (305)
T 2nzi_A 98 V---PAKIHLPKTLEGMGAVHALRGEVVSIKIPFSGKPDPVITWQKGQDLIDN 147 (305)
T ss_dssp E---EEEECCCHHHHSSCCEEEETTCCEEEEEEEEEESCCEEEEEESSSBCCS
T ss_pred c---CCccCCCccccccccEEecCCCEEEEEEEECCCCCCEEEEEECCEECCC
Confidence 2 22222 112334567899999999999999999999999877653
No 45
>3mj8_L Stimulatory hamster antibody HL4E10 FAB light CHA; hamster IGG, immune system; 2.94A {Cricetulus migratorius} PDB: 3mj9_L*
Probab=99.84 E-value=3.9e-20 Score=103.94 Aligned_cols=117 Identities=15% Similarity=0.265 Sum_probs=84.4
Q ss_pred CCccEEEEEEeccCCCCeeEEeeC--CccCC---------------------CCCCCeEEEecCCCCCCeEEEEEEEcCC
Q psy12725 1 MLALKFFTCKYEGNPVKTISWMKD--GKPVP---------------------DHNEPVFRIDSVRKEDKGMYQCVIRNEQ 57 (119)
Q Consensus 1 ~g~~~~l~c~~~~~~~~~v~w~~~--~~~~~---------------------~~~~~~l~~~~~~~~d~g~y~C~~~~~~ 57 (119)
.|+.|.|.|.+.+.+.+.+.|+|. +.... ......|.|.+++.+|+|.|.|.+.+..
T Consensus 14 ~G~~v~L~C~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~D~G~Y~C~~~~~~ 93 (213)
T 3mj8_L 14 LGQKATITCSGDKLSDVYVHWYQQKAGQAPVLVIYEDNRRPSGIPDHFSGSNSGNMATLTISKAQAGDEADYYCQSWDGT 93 (213)
T ss_dssp TTSCEEEEEECSSTTTSCEEEEEECTTSCCEEEEBTTTBCCTTSCTTEEEEEETTEEEEEESSCCGGGCEEEEEEEEETT
T ss_pred CCCCEEEEEEcCCCCCceEEEEEECCCCCcEEEEEECCccCCCccCcEEEEecCCEEEEEECCCChhhCEEEEEEeccCC
Confidence 489999999999888899999982 21110 0123469999999999999999999876
Q ss_pred C---CceeEeeEEEeee-cCCCeeeecCCccccCCCCcEEEEeEEccC-CC-CeEEEEECCEEccc
Q psy12725 58 E---SAQASGELKLGGR-FDPPVIKESFSDETLNPGPNYYFKCIASGN-PT-PEISWYLDGKKLVN 117 (119)
Q Consensus 58 ~---~~~~~~~~~v~~~-~~~~~~~~~~~~~~~~~g~~~~l~C~~~~~-p~-~~~~W~~~~~~~~~ 117 (119)
+ .......+.+... ..+|.+...+....+..|+.+.|.|.+.+. |+ +.+.|+++|..+..
T Consensus 94 ~~~~~~~~~~~l~V~~~~~~~P~i~~~~~~~~~~~g~~v~l~C~~~g~~p~~~~v~W~k~g~~l~~ 159 (213)
T 3mj8_L 94 NSAWVFGSGTKVTVLGQPNAAPSVTLFPPSSEELKTNQATLVCMINGFYPADVAVTWEADGTPITQ 159 (213)
T ss_dssp TTEEEEBCCEEEEEECSCCBCCEEEEECCCHHHHTTTEEEEEEEEEEEBSSCCEEEEEETTEEECT
T ss_pred cceeEEcCceEEEEeCCCCCCCeEEccCCCcccccCCcEEEEEEeeceeCCCeEEEEEcCCcccCC
Confidence 5 2233344444321 146666665555555589999999999886 43 38999999998753
No 46
>3r4d_A CEA-related cell adhesion molecule 1, isoform 1/2; immunoglobulin, beta-sandwich, mceacam1A - immunoglobulin FO spike NTD - galectin-like beta-sandwich fold; HET: NAG; 3.10A {Mus musculus} PDB: 1l6z_A*
Probab=99.84 E-value=3.2e-19 Score=99.74 Aligned_cols=114 Identities=12% Similarity=0.229 Sum_probs=82.6
Q ss_pred CCccEEEEEEeccCCCCeeEEeeCCccCCC-------------------------CCCCeEEEecCCCCCCeEEEEEEEc
Q psy12725 1 MLALKFFTCKYEGNPVKTISWMKDGKPVPD-------------------------HNEPVFRIDSVRKEDKGMYQCVIRN 55 (119)
Q Consensus 1 ~g~~~~l~c~~~~~~~~~v~w~~~~~~~~~-------------------------~~~~~l~~~~~~~~d~g~y~C~~~~ 55 (119)
.|+.+.|.|...+.+.+.+.|++++..... ..+..|.|.+++..|.|.|.|.+.+
T Consensus 13 ~G~~v~L~C~~~~~~~~~v~W~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~r~~~~~~~~L~i~~v~~~D~G~Y~C~~~~ 92 (208)
T 3r4d_A 13 EDNNVLLLVHNLPLALGAFAWYKGNTTAIDKEIARFVPNSNMNFTGQAYSGREIIYSNGSLLFQMITMKDMGVYTLDMTD 92 (208)
T ss_dssp TTCCEEEEEECCCSSCSEEEEEESSCCCGGGEEEEEEGGGTEEEECTTCCSSEEECTTSCEEECSCCGGGCEEEEEEEEC
T ss_pred cCCcEEEEEeCCCCCceEEEeccCCCCCccceEEEEecCCCccccCccccceeEEecCCeEEEccccccCCeEEEEEEEc
Confidence 489999999987778889999987432110 1235799999999999999999998
Q ss_pred CCC-CceeEeeEEEeeecCCCeeeecCCccccCCCCcEEEEeEEccCCCCeEEEEECCEEccc
Q psy12725 56 EQE-SAQASGELKLGGRFDPPVIKESFSDETLNPGPNYYFKCIASGNPTPEISWYLDGKKLVN 117 (119)
Q Consensus 56 ~~~-~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~g~~~~l~C~~~~~p~~~~~W~~~~~~~~~ 117 (119)
... .......+.+......|.+...... +..|+.+.|.|.+.+.| +.+.|++++..+..
T Consensus 93 ~~~~~~~~~~~l~V~~~~~~p~i~~~~~~--~~~g~~v~l~C~~~~~p-p~i~W~~~g~~l~~ 152 (208)
T 3r4d_A 93 ENYRRTQATVRFHVHQPVTQPFLQVTNTT--VKELDSVTLTCLSNDIG-ANIQWLFNSQSLQL 152 (208)
T ss_dssp SSCEEEEEEEEEEEECCCCCCEEEESCSS--CCTTCCEEEEEECSCTT-CEEEEEETTEECCC
T ss_pred ccCceeEEEEEEEeccCCCCCEEecCCce--EeeCCCEEEEEECCCCC-CceEEEECCEeCCC
Confidence 742 2333344444332233555443333 88999999999998865 79999999988763
No 47
>1qz1_A Neural cell adhesion molecule 1, 140 kDa isoform; IG modules, NCAM; 2.00A {Rattus norvegicus} SCOP: b.1.1.4 b.1.1.4 b.1.1.4 PDB: 1ie5_A
Probab=99.84 E-value=1.9e-19 Score=105.16 Aligned_cols=114 Identities=23% Similarity=0.532 Sum_probs=88.8
Q ss_pred CCccEEEEEEeccCC-CCeeEEee-CCccCCCC-----------CCCeEEEecCCCCCCeEEEEEEEcCCCCceeEeeEE
Q psy12725 1 MLALKFFTCKYEGNP-VKTISWMK-DGKPVPDH-----------NEPVFRIDSVRKEDKGMYQCVIRNEQESAQASGELK 67 (119)
Q Consensus 1 ~g~~~~l~c~~~~~~-~~~v~w~~-~~~~~~~~-----------~~~~l~~~~~~~~d~g~y~C~~~~~~~~~~~~~~~~ 67 (119)
.|+.+.|.|.+.+.+ .+.+.|++ ++..+... ....|.|.+++..|.|.|.|.+.+..+. .....+.
T Consensus 16 ~G~~v~l~C~~~~~~~~~~i~W~~~~g~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~D~G~Y~C~~~n~~g~-~~~~~~~ 94 (291)
T 1qz1_A 16 VGESKFFLCQVAGDAKDKDISWFSPNGEKLSPNQQRISVVWNDDDSSTLTIYNANIDDAGIYKCVVTAEDGT-QSEATVN 94 (291)
T ss_dssp TTCCEEEEEEESSCCSCCEEEEECTTSCBCCSSCSSEEEEEEETTEEEEEECSCCGGGCEEEEEEEECTTSC-EEEEEEE
T ss_pred CCCeEEEEEEeCCCCCCcEeEEECCCCeECccCCceEEEEEcCCCeEEEEEecCCCCCCEEEEEEEEcCCCC-eeEEEEE
Confidence 489999999999876 68999999 77666432 2357899999999999999999998643 2233344
Q ss_pred EeeecCCCeeeecCCccccCCCCcEEEEeEEccCCCCeEEEEECCEEcc
Q psy12725 68 LGGRFDPPVIKESFSDETLNPGPNYYFKCIASGNPTPEISWYLDGKKLV 116 (119)
Q Consensus 68 v~~~~~~~~~~~~~~~~~~~~g~~~~l~C~~~~~p~~~~~W~~~~~~~~ 116 (119)
+.+ ..+|.+...+....+.+|+.+.|.|.+.+.|.+.+.|++++..+.
T Consensus 95 l~v-~~~~~~~~~~~~~~~~~g~~v~l~C~~~~~p~~~v~W~~~~~~~~ 142 (291)
T 1qz1_A 95 VKI-FQKLMFKNAPTPQEFKEGEDAVIVCDVVSSLPPTIIWKHKGRDVI 142 (291)
T ss_dssp EEE-ECCSEEEECCSSEEEETTSCEEECCEEECSSCCEEEEEETTSCSS
T ss_pred EEe-eccccccCCCCcccccCCCeEEEEEEeccCCCCEEEEEECCEEcc
Confidence 433 246666666666678899999999999999989999999987654
No 48
>3sgj_C Human FCG3A receptor; receptor complex, FC receptor, antibody, immune system; HET: NAG BMA MAN FUC; 2.20A {Homo sapiens} PDB: 3sgk_C*
Probab=99.84 E-value=2e-19 Score=100.77 Aligned_cols=109 Identities=13% Similarity=0.237 Sum_probs=82.5
Q ss_pred CCccEEEEEEeccCCCCe-eEEeeCCccCCCCCCCeEEEecCCCCCCeEEEEEEEcCCCCceeEeeEEEeeecCCCeeee
Q psy12725 1 MLALKFFTCKYEGNPVKT-ISWMKDGKPVPDHNEPVFRIDSVRKEDKGMYQCVIRNEQESAQASGELKLGGRFDPPVIKE 79 (119)
Q Consensus 1 ~g~~~~l~c~~~~~~~~~-v~w~~~~~~~~~~~~~~l~~~~~~~~d~g~y~C~~~~~~~~~~~~~~~~v~~~~~~~~~~~ 79 (119)
.|+.+.|.|.+.+.+.+. +.|++++..+.. ....|.|.+++.+|.|.|.|.+.+.. ......+.+. .+|.+..
T Consensus 21 ~G~~v~L~C~~~~~p~~~~v~W~k~g~~l~~-~~~~L~i~~v~~~D~G~Y~C~a~n~~--~s~~~~l~V~---~~p~~~~ 94 (204)
T 3sgj_C 21 EKDSVTLKCQGAYSPEDQSTQWFHNESLISS-QASSYFIDAATVDDSGEYRCQTQLST--LSDPVQLEVH---IGWLLLQ 94 (204)
T ss_dssp TTCCEEEEEECCSSSSCCCEEEEETTEEESC-CSSEEEESSCCGGGCEEEEEEETTSB--CCCCEEEEEE---CSSEEEE
T ss_pred CCCCEEEEEcCCCCCCCcEEEEEECCEEccc-CccEEEEecccccCCEEEEEEeCCCc--ccccEEEEEe---cCceEec
Confidence 489999999999887665 999999988754 34899999999999999999998742 2223333332 3444443
Q ss_pred cCCccccCCCCcEEEEeEEccC-CCCeEEEEECCEEcc
Q psy12725 80 SFSDETLNPGPNYYFKCIASGN-PTPEISWYLDGKKLV 116 (119)
Q Consensus 80 ~~~~~~~~~g~~~~l~C~~~~~-p~~~~~W~~~~~~~~ 116 (119)
.+ ...+.+|+.+.|.|.+.+. |.+.+.|+++|..+.
T Consensus 95 ~~-~~~v~~G~~v~L~C~~~~~~p~~~v~W~k~g~~~~ 131 (204)
T 3sgj_C 95 AP-RWVFKEEDPIHLRCHSWKNTALHKVTYLQNGKGRK 131 (204)
T ss_dssp CS-CSEEETTCCEEEEEEEGGGCCCEEEEEEETTEEEE
T ss_pred CC-ceeEeCCCcEEEEEEecCCCCCceEEEEECCcEee
Confidence 33 3567789999999999665 557899999998764
No 49
>3ojm_B Fibroblast growth factor receptor 2; beta trefoil motif, immunoglobulin-like domain, growth facto factor receptor, extracellular; 2.10A {Homo sapiens} PDB: 1nun_B* 3oj2_C 2fdb_P 1iil_E 1ev2_E 1e0o_B* 1ii4_E 1djs_A 3ojv_C* 1cvs_C 1fq9_C* 1evt_C
Probab=99.84 E-value=4.2e-20 Score=104.64 Aligned_cols=115 Identities=28% Similarity=0.509 Sum_probs=86.8
Q ss_pred CCccEEEEEEeccCCCCeeEEeeCCccCCCC----------CCCeEEEecCCCCCCeEEEEEEEcCCCCceeEeeEEEee
Q psy12725 1 MLALKFFTCKYEGNPVKTISWMKDGKPVPDH----------NEPVFRIDSVRKEDKGMYQCVIRNEQESAQASGELKLGG 70 (119)
Q Consensus 1 ~g~~~~l~c~~~~~~~~~v~w~~~~~~~~~~----------~~~~l~~~~~~~~d~g~y~C~~~~~~~~~~~~~~~~v~~ 70 (119)
.|+.+.|.|.+.+.|.+.+.|++++..+... ....|.|.+++..|.|.|.|.+.+..+.......+.+..
T Consensus 33 ~G~~v~L~C~~~~~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~~~n~~~~~~~~~~l~V~~ 112 (231)
T 3ojm_B 33 AANTVKFRCPAGGNPMPTMRWLKNGKEFKQEHRIGGYKVRNQHWSLIMESVVPSDKGNYTCVVENEYGSINHTYHLDVVE 112 (231)
T ss_dssp TTSCEEEECCEEEESCCEEEEEETTEECCGGGSTTCCEEEGGGTEEEECSCCGGGCEEEEEEEEETTEEEEEEEEEEEEC
T ss_pred cCCCEEEEEecccCCCCeEEEEECCccccccccccceeeecCcceEEEecCCcccCEEEEEEEecccCcccccEEEEEEc
Confidence 4899999999998888899999998876432 124799999999999999999998866554455555543
Q ss_pred ec-CCCeeee-cCCccccCCCCcEEEEeEEccCCCCeEEEEE----CCEEc
Q psy12725 71 RF-DPPVIKE-SFSDETLNPGPNYYFKCIASGNPTPEISWYL----DGKKL 115 (119)
Q Consensus 71 ~~-~~~~~~~-~~~~~~~~~g~~~~l~C~~~~~p~~~~~W~~----~~~~~ 115 (119)
.. .+|.+.. .+....+..|+.+.|.|.+.+.|.+.+.|++ +|..+
T Consensus 113 ~~~~~p~~~~~~~~~~~~~~g~~~~l~C~~~~~p~p~v~W~~~~~~~g~~~ 163 (231)
T 3ojm_B 113 RSRHRPILQAGLPANASTVVGGDVEFVCKVYSDAQPHIQWIKHVEKNGSKY 163 (231)
T ss_dssp CCCCCCEECTTCSCCEEEETTCCEEEECCEECSSCCEEEEEEECCBTTBSB
T ss_pred CCCCCCceeeccCCceEEEeCCcEEEEEEEecCCCCEEEEEECCCCCCccc
Confidence 21 1222222 2334567789999999999999999999999 66544
No 50
>2wng_A Tyrosine-protein phosphatase non-receptor type substrate 1; signal regulatory protein alpha, immunoglobulin superfamily, phosphoprotein; HET: NAG; 2.49A {Homo sapiens}
Probab=99.84 E-value=1.5e-19 Score=107.35 Aligned_cols=115 Identities=21% Similarity=0.448 Sum_probs=84.4
Q ss_pred CCccEEEEEEeccC-CCCeeEEeeCCccCCC-----------------------CCCCeEEEecCCCCCCeEEEEEEEcC
Q psy12725 1 MLALKFFTCKYEGN-PVKTISWMKDGKPVPD-----------------------HNEPVFRIDSVRKEDKGMYQCVIRNE 56 (119)
Q Consensus 1 ~g~~~~l~c~~~~~-~~~~v~w~~~~~~~~~-----------------------~~~~~l~~~~~~~~d~g~y~C~~~~~ 56 (119)
.|+.+.|.|.+.+. |.+.|.|+|++..... .....|.|.+++.+|+|.|.|.+.+.
T Consensus 17 ~G~~v~L~C~~~~~~p~~~v~W~k~~~~~~~~i~~~~~~~~~r~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~n~ 96 (327)
T 2wng_A 17 AGESAILHCTVTSLIPVGPIQWFRGAGPARELIYNQKEGHFPRVTTVSESTKRENMDFSISISNITPADAGTYYCVKFRK 96 (327)
T ss_dssp TTSCEEECCEESCCCSCCCEEEEESCSTTCEEEEETTSSCCTTEEECC---CTTCCBCCEEECSCCGGGCEEEEEEEEES
T ss_pred cCCcEEEEEEccCcCCCceEEEEECCCCCceEEEEcCCCCcceeeeecccccccCceeEEEEccCccccCeEEEEEeecC
Confidence 48999999999887 7889999998754210 23457999999999999999999987
Q ss_pred CCCce-----eEeeEEEeeecCCCeeeecCCccccCCCCcEEEEeEEccCCCC--eEEEEECCEEccc
Q psy12725 57 QESAQ-----ASGELKLGGRFDPPVIKESFSDETLNPGPNYYFKCIASGNPTP--EISWYLDGKKLVN 117 (119)
Q Consensus 57 ~~~~~-----~~~~~~v~~~~~~~~~~~~~~~~~~~~g~~~~l~C~~~~~p~~--~~~W~~~~~~~~~ 117 (119)
.+... ....+.|.....+|.+. .....+.+|+.+.|.|.+.+.|++ .+.|+++|..+..
T Consensus 97 ~~~~~~~~~~~~~~l~V~~~p~~p~i~--~~~~~~~~g~~~~l~C~~~g~p~~~~~v~W~k~g~~l~~ 162 (327)
T 2wng_A 97 GSPDTEFKSGAGTELSVRAKPSAPVVS--GPAARATPQHTVSFTCESHGFSPRDITLKWFKNGNELSD 162 (327)
T ss_dssp STTCEEEEECCCEEEEEEBCCCCCEEE--CCSSCBCTTCEEEEEEEEEEEBSSCCEEEEEETTEECCC
T ss_pred CCcceeEeecCcEEEEEEecCCCceee--ccccccCCCCEEEEEEEEeCccCCCcEEEEEECCEEccc
Confidence 54311 12344444322334443 223567889999999999888765 8999999988763
No 51
>2wim_A N-CAM 2, NCAM2, neural cell adhesion molecule 2; cell membrane, transmembrane, immunoglobulin; HET: NDG NAG; 3.00A {Homo sapiens}
Probab=99.84 E-value=1.3e-19 Score=105.78 Aligned_cols=116 Identities=26% Similarity=0.483 Sum_probs=86.2
Q ss_pred CCccEEEEEEeccCCCCeeEEeeCCccCCC--------CCCCeEEEecCCCCCCeEEEEEEEcCCCCceeEeeEEEeeec
Q psy12725 1 MLALKFFTCKYEGNPVKTISWMKDGKPVPD--------HNEPVFRIDSVRKEDKGMYQCVIRNEQESAQASGELKLGGRF 72 (119)
Q Consensus 1 ~g~~~~l~c~~~~~~~~~v~w~~~~~~~~~--------~~~~~l~~~~~~~~d~g~y~C~~~~~~~~~~~~~~~~v~~~~ 72 (119)
.|+.+.|.|.+.+.|.+.+.|++++..+.. .....|.|.+++..|.|.|.|.+.+..+.......+.+.+.
T Consensus 112 ~G~~v~l~C~~~~~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~~~n~~~~~~~~~~~~~~v~- 190 (291)
T 2wim_A 112 QGEDAEVVCRVSSSPAPAVSWLYHNEEVTTISDNRFAMLANNNLQILNINKSDEGIYRCEGRVEARGEIDFRDIIVIVN- 190 (291)
T ss_dssp TTSCEEECCCCBCSSCCEEEEECC----CBCCCSSEEECTTSCEEETTCCGGGCEEEEEEEEETTTTEEEEEEEEEEEE-
T ss_pred CCCCEEEEEEEccCCCCEEEEEECCccccccCCceEEEccCCCEEEEecchhhCEEEEEEEEECCCCeeEEeeEEEEec-
Confidence 488999999999989899999998876542 13457999999999999999999987644333334444433
Q ss_pred CCCeeeecCC--ccccCCCCcEEEEeEEccCCCCeEEEEECCEEccc
Q psy12725 73 DPPVIKESFS--DETLNPGPNYYFKCIASGNPTPEISWYLDGKKLVN 117 (119)
Q Consensus 73 ~~~~~~~~~~--~~~~~~g~~~~l~C~~~~~p~~~~~W~~~~~~~~~ 117 (119)
.+|.+..... ...+.+|+.+.|.|.+.+.|.|.+.|+++|..+..
T Consensus 191 ~~p~~~~~~~~~~~~~~~g~~~~l~C~~~g~p~p~v~W~~~g~~~~~ 237 (291)
T 2wim_A 191 VPPAISMPQKSFNATAERGEEMTFSCRASGSPEPAISWFRNGKLIEE 237 (291)
T ss_dssp BCCCCBCSCSEEECCSSSCCEEEEECBCCCBSCCEEEEEETTEECCC
T ss_pred cCCccccCcccccceecCCCeEEEEEEeecCCCCeEEEEECCEECcC
Confidence 3455544332 34577899999999999999999999999998764
No 52
>3dmk_A DOWN syndrome cell adhesion molecule (dscam) ISOF 1.30.30, N-terminal eight IG domains...; immunoglobulin domain; HET: NAG NDG; 4.19A {Drosophila melanogaster}
Probab=99.84 E-value=1.4e-19 Score=118.00 Aligned_cols=116 Identities=65% Similarity=1.212 Sum_probs=97.5
Q ss_pred CCccEEEEEEeccCCCCeeEEeeCCccCCCCCCCeEEEecCCCCCCeEEEEEEEcCCCCceeEeeEEEeeecCCCeeeec
Q psy12725 1 MLALKFFTCKYEGNPVKTISWMKDGKPVPDHNEPVFRIDSVRKEDKGMYQCVIRNEQESAQASGELKLGGRFDPPVIKES 80 (119)
Q Consensus 1 ~g~~~~l~c~~~~~~~~~v~w~~~~~~~~~~~~~~l~~~~~~~~d~g~y~C~~~~~~~~~~~~~~~~v~~~~~~~~~~~~ 80 (119)
.|+.+.|.|.+.+.|.+.+.|++++..+.. ....|.|.+++..|.|.|.|.+.+..+.......+.+.....+|.+...
T Consensus 357 ~G~~v~l~C~~~g~p~~~v~W~k~g~~~~~-~~~~L~i~~v~~~d~G~Y~C~a~n~~g~~~~~~~l~v~~~~~~p~i~~~ 435 (816)
T 3dmk_A 357 FGRPAVFTCQYTGNPIKTVSWMKDGKAIGH-SESVLRIESVKKEDKGMYQCFVRNDRESAEASAELKLGGRFDPPVIRQA 435 (816)
T ss_dssp TTSCEEEEEEEEEECCCEEEEEETTEECSC-CSSEEEESSCCGGGCEEEEEEEECSSCEEEECCEEECCCSSCCCEEEEE
T ss_pred CCCCEEEEEEEeccCCCEEEEEECCEECCC-CCCEEEEcCCCHHHCEEEEEEEECCCCcEEEEEEEEEccccCCCceEec
Confidence 388999999999889999999999988753 4678999999999999999999998765555555665443457777776
Q ss_pred CCccccCCCCcEEEEeEEccCCCCeEEEEECCEEccc
Q psy12725 81 FSDETLNPGPNYYFKCIASGNPTPEISWYLDGKKLVN 117 (119)
Q Consensus 81 ~~~~~~~~g~~~~l~C~~~~~p~~~~~W~~~~~~~~~ 117 (119)
+....+.+|+.+.|.|.+.+.|.+.+.|+++|..+..
T Consensus 436 ~~~~~v~~G~~v~L~C~~~g~p~p~v~W~~~g~~l~~ 472 (816)
T 3dmk_A 436 FQEETMEPGPSVFLKCVAGGNPTPEISWELDGKKIAN 472 (816)
T ss_dssp CCCEEECSSSCEEEEEEEECSSCCEEEEEETTEECCS
T ss_pred CcceEEcCCCCEEEEEEEecCCCCEEEEEECCEECCC
Confidence 6666788999999999999999999999999988754
No 53
>1itb_B Type 1 interleukin-1 receptor; immunoglobulin fold, transmembrane, glycoprotein, signal, complex (immunoglobulin/receptor); 2.50A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 b.1.1.4 PDB: 1ira_Y* 4dep_B* 1g0y_R
Probab=99.83 E-value=2.4e-19 Score=105.81 Aligned_cols=117 Identities=18% Similarity=0.319 Sum_probs=89.2
Q ss_pred CCccEEEEEEe------ccCCCCeeEEeeCCccCCCC------CCCeEEEecCCCCCCeEEEEEEE-cCCCCcee-EeeE
Q psy12725 1 MLALKFFTCKY------EGNPVKTISWMKDGKPVPDH------NEPVFRIDSVRKEDKGMYQCVIR-NEQESAQA-SGEL 66 (119)
Q Consensus 1 ~g~~~~l~c~~------~~~~~~~v~w~~~~~~~~~~------~~~~l~~~~~~~~d~g~y~C~~~-~~~~~~~~-~~~~ 66 (119)
.|+.+.|.|.+ .+.|.+.+.|++++..+... ....|.|.+++..|.|.|.|.+. +..+.... ...+
T Consensus 117 ~g~~v~l~C~~~~~~~~~g~p~~~i~W~k~~~~l~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~~n~~g~~~~~~~~~ 196 (315)
T 1itb_B 117 VAGDGGLVCPYMEFFKNENNELPKLQWYKDCKPLLLDNIHFSGVKDRLIVMNVAEKHRGNYTCHASYTYLGKQYPITRVI 196 (315)
T ss_dssp TTSCEEEECSSCTTTCTTTTCCCCCEEEETTEECCCCSSSEEEETTEEEESSCCGGGCEEEEEEEEEEETTEEEEEEEEE
T ss_pred cCCCeEEEEecccccccCCCCCCEEEEEECCEECCCccceEeecCceEEEEeceehhCcEEEEEEEcCCCCcEEEEEEEE
Confidence 38899999998 78888999999999887432 34689999999999999999999 66554321 2222
Q ss_pred EEeee----cCCCeeeecCCc-cccCCCCcEEEEeEEccCCCCeEEEEECCEEccc
Q psy12725 67 KLGGR----FDPPVIKESFSD-ETLNPGPNYYFKCIASGNPTPEISWYLDGKKLVN 117 (119)
Q Consensus 67 ~v~~~----~~~~~~~~~~~~-~~~~~g~~~~l~C~~~~~p~~~~~W~~~~~~~~~ 117 (119)
.+.+. ..+|.+...+.. ..+..|+.+.|.|.+.+.|.|.+.|+++|..+..
T Consensus 197 ~~~~~~~~~~~~P~~~~~~~~~~~~~~g~~v~l~C~~~g~P~p~i~W~~~g~~i~~ 252 (315)
T 1itb_B 197 EFITLEENKPTRPVIVSPANETMEVDLGSQIQLICNVTGQLSDIAYWKWNGSVIDE 252 (315)
T ss_dssp EEEEECCCCCCCCEECSCCSEEEECCSSSCEEEEEEEEECTTSEEEEEETTEECCT
T ss_pred EEEEecCCCCCCCEEecCCCCcEEEeCCCcEEEEEEEecCCCCeeEEEECCEECCc
Confidence 22221 245666554443 3678999999999999999999999999998764
No 54
>3d9a_L Light chain of hyhel10 antibody fragment (FAB); lysozyme, antigen, allergen, antimic bacteriolytic enzyme, glycosidase, hydrolase; 1.20A {Mus musculus} PDB: 3hfm_L 1xgp_A 1xgq_A 1xgr_A 1xgt_A 1dqq_A 1dqm_L 1dqj_A 1nby_A 1nbz_A 1ndg_A 1ndm_A 1xgu_A 1fh5_L 1bm3_L 1opg_L 1mlb_A 1mlc_A 1rih_L 1p2c_A ...
Probab=99.83 E-value=8.9e-20 Score=102.46 Aligned_cols=117 Identities=17% Similarity=0.267 Sum_probs=82.8
Q ss_pred CCccEEEEEEeccCCCCeeEEeeCCc--cC----------C----C-------CCCCeEEEecCCCCCCeEEEEEEEcCC
Q psy12725 1 MLALKFFTCKYEGNPVKTISWMKDGK--PV----------P----D-------HNEPVFRIDSVRKEDKGMYQCVIRNEQ 57 (119)
Q Consensus 1 ~g~~~~l~c~~~~~~~~~v~w~~~~~--~~----------~----~-------~~~~~l~~~~~~~~d~g~y~C~~~~~~ 57 (119)
.|+.+.|.|.+.+.+.+.+.|+|++. .+ . . .....|.|.+++.+|+|.|.|.+.+..
T Consensus 15 ~G~~v~L~C~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~D~G~Y~C~~~~~~ 94 (213)
T 3d9a_L 15 PGNSVSLSCRASQSIGNNLHWYQQKSHESPRLLIKYASQSISGIPSRFSGSGSGTDFTLSINSVETEDFGMYFCQQSNSW 94 (213)
T ss_dssp TTCCEEEEEEESSCCTTCEEEEEECTTSCCEEEEETTTEECTTSCTTEEEEEETTEEEEEESSCCGGGCEEEEEEECSSS
T ss_pred CCCcEEEEEECCCCCCCCEEEEEeCCCCCcEEEEEEcccccccccccEEEEcCCCEEEEEECCCChhhCEEEEEeeecCC
Confidence 48999999999988888999998532 11 0 0 012379999999999999999999875
Q ss_pred CCce-eEeeEEEeeecCCCeeeecCCccccCCCCcEEEEeEEcc-CCCC-eEEEEECCEEccc
Q psy12725 58 ESAQ-ASGELKLGGRFDPPVIKESFSDETLNPGPNYYFKCIASG-NPTP-EISWYLDGKKLVN 117 (119)
Q Consensus 58 ~~~~-~~~~~~v~~~~~~~~~~~~~~~~~~~~g~~~~l~C~~~~-~p~~-~~~W~~~~~~~~~ 117 (119)
+... ....+.+.....+|.+...+.......|+.+.|.|.+.+ .|.+ .+.|+++|..+..
T Consensus 95 ~~~~~~~~~l~V~~~~~~p~v~~~~~~~~~~~g~~~~l~C~~~g~~p~~~~v~W~k~g~~~~~ 157 (213)
T 3d9a_L 95 PYTFGGGTKLEIKRADAAPTVSIFPPSSEQLTSGGASVVCFLNNFYPKDINVKWKIDGSERQN 157 (213)
T ss_dssp SCEECCCEEEEECCCCBCCEEEEECCCHHHHHTTEEEEEEEEEEEBSSCCEEEEEETTEEECT
T ss_pred cceeCCCEEEEEecCCCCceeEeECCChhhcCCCcEEEEEEEeeecCCceEEEEEcCCCcCcc
Confidence 4322 223455543223666665444333447889999999977 5555 7999999998754
No 55
>1nbq_A JAM, junctional adhesion molecule 1, PAM-1; reovirus receptor, tight junction formation, immunoglobulin superfamily, immune system; 2.90A {Homo sapiens} SCOP: b.1.1.1 b.1.1.4 PDB: 3eoy_G
Probab=99.83 E-value=2e-20 Score=104.58 Aligned_cols=116 Identities=22% Similarity=0.371 Sum_probs=86.1
Q ss_pred CCccEEEEEEeccCCCCeeEEeeCCccC------------CCC-----CCCeEEEecCCCCCCeEEEEEEEcCCCCceeE
Q psy12725 1 MLALKFFTCKYEGNPVKTISWMKDGKPV------------PDH-----NEPVFRIDSVRKEDKGMYQCVIRNEQESAQAS 63 (119)
Q Consensus 1 ~g~~~~l~c~~~~~~~~~v~w~~~~~~~------------~~~-----~~~~l~~~~~~~~d~g~y~C~~~~~~~~~~~~ 63 (119)
.|+.+.|.|.+.+.|.+.+.|++++..+ ... ....|.|.+++..|.|.|.|.+.+..+.....
T Consensus 18 ~G~~v~L~C~~~~~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~L~i~~~~~~d~G~Y~C~~~~~~g~~~~~ 97 (209)
T 1nbq_A 18 ENNPVKLSCAYSGFSSPRVEWKFDQGDTTRLVCYNNKITASYEDRVTFLPTGITFKSVTREDTGTYTCMVSEEGGNSYGE 97 (209)
T ss_dssp TTCCCEEECEEESCSSEEEEEEEEETTEEEESEETTEECTTTTTTCEEETTEEECSCCCTTSCSEEEEEEEETTSSCEEC
T ss_pred cCCCEEEEEEEeCCCCcEEEEEEcCCceeEEEEecCccCccccCceEeeccEEEEeeCCHHHCcEEEEEEecCCCCccce
Confidence 4899999999998888999999976552 111 12679999999999999999999875533333
Q ss_pred eeEEEeeecCCCeeeecCCccccCCCCcEEEEeEE-ccCCCCeEEEEECCEEccc
Q psy12725 64 GELKLGGRFDPPVIKESFSDETLNPGPNYYFKCIA-SGNPTPEISWYLDGKKLVN 117 (119)
Q Consensus 64 ~~~~v~~~~~~~~~~~~~~~~~~~~g~~~~l~C~~-~~~p~~~~~W~~~~~~~~~ 117 (119)
..+.+.+. .+|.+........+..|+.+.|.|.+ .+.|.+.+.|++++..+..
T Consensus 98 ~~~~l~V~-~~p~~~~~~~~~~~~~g~~~~l~C~~~~~~p~~~v~W~~~~~~~~~ 151 (209)
T 1nbq_A 98 VKVKLIVL-VPPSKPTVNIPSSATIGNRAVLTCSEQDGSPPSEYTWFKDGIVMPT 151 (209)
T ss_dssp CEEECCEE-BCCCCCCCCCBSEEETTSCEEECCCCCSCBSCCEEEEEETTCCCCS
T ss_pred EEEEEEEe-cCCcCCCcccccceecCCEEEEEEeCCCCCCCceeEEEECCeeCCC
Confidence 33444332 24444433444457889999999996 8889999999999987654
No 56
>1lk3_L 9D7 light chain; antigen-antibody complex, immune system; 1.91A {Rattus norvegicus} SCOP: b.1.1.1 b.1.1.2 PDB: 1fn4_A 1c5d_L 1bfo_A 3b9k_L*
Probab=99.83 E-value=1.4e-19 Score=101.59 Aligned_cols=117 Identities=15% Similarity=0.238 Sum_probs=82.1
Q ss_pred CCccEEEEEEeccCCCCeeEEeeCC--ccC------------CCC---------CCCeEEEecCCCCCCeEEEEEEEcCC
Q psy12725 1 MLALKFFTCKYEGNPVKTISWMKDG--KPV------------PDH---------NEPVFRIDSVRKEDKGMYQCVIRNEQ 57 (119)
Q Consensus 1 ~g~~~~l~c~~~~~~~~~v~w~~~~--~~~------------~~~---------~~~~l~~~~~~~~d~g~y~C~~~~~~ 57 (119)
.|+.+.|.|.+.+.+.+.+.||++. ..+ ... ....|.|.+++.+|.|.|.|.+.+..
T Consensus 14 ~G~~v~L~C~~~~~~~~~v~W~~~~~g~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~D~G~Y~C~~~~~~ 93 (210)
T 1lk3_L 14 PGEKLTISCKASESVTSRMHWYQQKPGQQPKLLIYKASNLASGVPARFSGSGSGTDFTLTIDPVEADDTAIYFCQQSWNG 93 (210)
T ss_dssp TTSCEEEEEEESSCCTTCEEEEEECTTSCCEEEEETTTEECTTCCTTEEEEEETTEEEEEESSCCGGGCEEEEEEECSSS
T ss_pred CCCCEEEEeeCCCccCCCEEEEEECCCCCeEEEEEccccccCCccccEEEEecCCEEEEEECCCCHHHCeEEEEEEEcCC
Confidence 4899999999998888899999842 211 000 12379999999999999999999875
Q ss_pred CCce-eEeeEEEeeecCCCeeeecCCccccCCCCcEEEEeEEccC-CCC-eEEEEECCEEccc
Q psy12725 58 ESAQ-ASGELKLGGRFDPPVIKESFSDETLNPGPNYYFKCIASGN-PTP-EISWYLDGKKLVN 117 (119)
Q Consensus 58 ~~~~-~~~~~~v~~~~~~~~~~~~~~~~~~~~g~~~~l~C~~~~~-p~~-~~~W~~~~~~~~~ 117 (119)
+... ....+.+.....+|.+...+.......|+.+.|.|.+.+. |.+ .+.|+++|..+..
T Consensus 94 ~~~~~~~~~l~V~~~~~~P~v~~~~~~~~~~~g~~v~l~C~~~g~~p~~~~v~W~k~g~~~~~ 156 (210)
T 1lk3_L 94 PLTFGAGTKLELKRADAAPTVSIFPPSTEQLATGGASVVCLMNNFYPRDISVKWKIDGTERRD 156 (210)
T ss_dssp SCEECCCEEEEECCCCBCCEEEEECCCHHHHTTTEEEEEEEEEEEBSSCCEEEEEETTEECCT
T ss_pred CceeCCCEEEEEcCCCcCCeEEEECCchhhccCCcEEEEEEEEeEeCCceEEEEEeCCccCCC
Confidence 4321 2234555332235666654443334478999999999874 444 8999999998754
No 57
>1fnl_A Low affinity immunoglobulin gamma FC region receptor III-B; beta sandwich, immunoglobulin-like, immune system receptor; 1.80A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 PDB: 1e4j_A 1e4k_C* 1t83_C* 1t89_C* 3ay4_C*
Probab=99.83 E-value=3e-19 Score=97.77 Aligned_cols=109 Identities=13% Similarity=0.233 Sum_probs=82.3
Q ss_pred CCccEEEEEEeccCCCCe-eEEeeCCccCCCCCCCeEEEecCCCCCCeEEEEEEEcCCCCceeEeeEEEeeecCCCeeee
Q psy12725 1 MLALKFFTCKYEGNPVKT-ISWMKDGKPVPDHNEPVFRIDSVRKEDKGMYQCVIRNEQESAQASGELKLGGRFDPPVIKE 79 (119)
Q Consensus 1 ~g~~~~l~c~~~~~~~~~-v~w~~~~~~~~~~~~~~l~~~~~~~~d~g~y~C~~~~~~~~~~~~~~~~v~~~~~~~~~~~ 79 (119)
.|+.+.|.|.+.+.+.+. +.|++++..+.. ....|.|.+++..|.|.|.|.+.+... .....+.+. .++....
T Consensus 21 ~G~~v~L~C~~~~~p~~~~~~W~~~~~~~~~-~~~~L~i~~~~~~d~G~Y~C~~~n~~~--s~~~~l~V~---~~~~~~~ 94 (175)
T 1fnl_A 21 EKDSVTLKCQGAYSPEDNSTQWFHNESLISS-QASSYFIDAATVNDSGEYRCQTNLSTL--SDPVQLEVH---IGWLLLQ 94 (175)
T ss_dssp TTCCEEEEEECCCBTTBCCCEEEETTEEEES-SCSEEEESSCCGGGCEEEEEECSSSCC--CCCEEEEEE---CSSEEEE
T ss_pred CCCcEEEEeeCCCCCCCcceEEEECCEEccC-CceEEEEeCCCcccCEEEEEEeeCCcc--cccEEEEEe---CCCceee
Confidence 489999999998887665 889999987753 567999999999999999999987543 223333332 2333222
Q ss_pred cCCccccCCCCcEEEEeEEccCCCC-eEEEEECCEEcc
Q psy12725 80 SFSDETLNPGPNYYFKCIASGNPTP-EISWYLDGKKLV 116 (119)
Q Consensus 80 ~~~~~~~~~g~~~~l~C~~~~~p~~-~~~W~~~~~~~~ 116 (119)
.....+.+|+.+.|.|.+.+.+++ .+.|+++|..+.
T Consensus 95 -~~~~~~~~g~~~~l~C~~~~~~~~~~~~W~k~g~~~~ 131 (175)
T 1fnl_A 95 -APRWVFKEEDPIHLRCHSWKNTALHKVTYLQNGKDRK 131 (175)
T ss_dssp -CSCSEEETTCCEEEEEEECTTCCCEEEEEEETTEEEE
T ss_pred -CCCceecCCCCEEEEEEcCCCCCceEEEEEECCeEcc
Confidence 233457789999999999887655 999999998764
No 58
>1nkr_A P58-CL42 KIR; inhibitory receptor, natural killer cells, immunological receptors, immunoglobulin fold; 1.70A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 PDB: 1m4k_A 1efx_D 2dli_A 2dl2_A 3h8n_A
Probab=99.83 E-value=1.8e-19 Score=100.61 Aligned_cols=113 Identities=12% Similarity=0.197 Sum_probs=82.3
Q ss_pred CCccEEEEEEeccCCCCeeEEeeCCccCCC----------CCCCeEEEecCCCCCCeEEEEEEEcCCC-----CceeEee
Q psy12725 1 MLALKFFTCKYEGNPVKTISWMKDGKPVPD----------HNEPVFRIDSVRKEDKGMYQCVIRNEQE-----SAQASGE 65 (119)
Q Consensus 1 ~g~~~~l~c~~~~~~~~~v~w~~~~~~~~~----------~~~~~l~~~~~~~~d~g~y~C~~~~~~~-----~~~~~~~ 65 (119)
.|+.|+|.|.+.+ +.+.+.|+|++..+.. .....|.|.+++..|.|.|.|.+.+... .......
T Consensus 21 ~G~~v~L~C~~~~-~~~~~~w~k~g~~~~~~~~~~~~~~~~~~~~l~I~~v~~~D~G~Y~C~a~~~~~~~~~~~~s~~~~ 99 (201)
T 1nkr_A 21 SEETVILQCWSDV-MFEHFLLHREGMFNDTLRLIGEHHDGVSKANFSISRMTQDLAGTYRCYGSVTHSPYQVSAPSDPLD 99 (201)
T ss_dssp TTCCEEEEEEESS-CCSEEEEEEESSSCEEEEEECEEETTEEEEEEEESSCCGGGCEEEEEEEEBTTBTTCCCCCCCCEE
T ss_pred CCCcEEEEEeccC-CCCEEEEEECCCcCCcceeeeecCCCCceEEEEeccCCcccCeEEEEeEecCCCCccccCCCCCEE
Confidence 4899999999974 7789999999876531 1246789999999999999999986421 1122334
Q ss_pred EEEeeecCCCeeeecCCccccCCCCcEEEEeEEccCCCCeEEEEECCEEcc
Q psy12725 66 LKLGGRFDPPVIKESFSDETLNPGPNYYFKCIASGNPTPEISWYLDGKKLV 116 (119)
Q Consensus 66 ~~v~~~~~~~~~~~~~~~~~~~~g~~~~l~C~~~~~p~~~~~W~~~~~~~~ 116 (119)
+.+.....+|.+...+. ..+.+|+.++|.|.+.+ +.+.+.|+|+|..+.
T Consensus 100 l~V~~~~~~p~i~~~p~-~~v~~G~~v~L~C~~~~-~~~~~~w~k~g~~~~ 148 (201)
T 1nkr_A 100 IVIIGLYEKPSLSAQPG-PTVLAGENVTLSCSSRS-SYDMYHLSREGEAHE 148 (201)
T ss_dssp EEEECSSCCCEEEEESC-SEECTTCEEEEEEEESS-CCSEEEEEETTCSSC
T ss_pred EEeeccCCCCceecCCC-CccCCCCeEEEEEeCCC-CCceEEEEECCcccC
Confidence 44443334566665544 46789999999999876 567899999987553
No 59
>2vr9_A Roundabout 1, ROBO; immunoglobulin-like domain, AXON guidance, cell adhesion, immunoglobulin domain; 3.2A {Drosophila melanogaster} PDB: 2vra_A*
Probab=99.83 E-value=1e-19 Score=102.45 Aligned_cols=114 Identities=27% Similarity=0.513 Sum_probs=85.5
Q ss_pred CCccEEEEEEeccCCCCeeEEeeCCccCCCC---------CCCeE----EEecCCCCCCeEEEEEEEcCCCCce-eEeeE
Q psy12725 1 MLALKFFTCKYEGNPVKTISWMKDGKPVPDH---------NEPVF----RIDSVRKEDKGMYQCVIRNEQESAQ-ASGEL 66 (119)
Q Consensus 1 ~g~~~~l~c~~~~~~~~~v~w~~~~~~~~~~---------~~~~l----~~~~~~~~d~g~y~C~~~~~~~~~~-~~~~~ 66 (119)
.|+.+.|.|.+.+.|.+.+.|++++..+... ....+ .|.+++..|.|.|.|.+.+..+... ....+
T Consensus 23 ~G~~v~L~C~~~g~p~~~v~W~~~g~~~~~~~~~~~~~~~~~~~~~~~l~i~~v~~~d~G~Y~C~~~n~~g~~~~~~~~l 102 (217)
T 2vr9_A 23 KNEPATLNCKVEGKPEPTIEWFKDGEPVSTNEKKSHRVQFKDGALFFYRTMQGKKEQDGGEYWCVAKNRVGQAVSRHASL 102 (217)
T ss_dssp TTSCEEECCEEECSSCCEEEEEETTEECCCSSSSSSEEECTTSCEEESSCCBSSSCBCCEEEEEEEEETTEEEECCCEEE
T ss_pred CCCcEEEEEEcCCCCCCeEEEEECCcCccCCCccceeEEecCCceEEEEEeccCCcccCceEEEEEecCCCccccccceE
Confidence 4899999999998888999999998876432 11222 4667889999999999998754331 13344
Q ss_pred EEeeecCCCeeeecCCccccCCCCcEEEEeEE-ccCCCCeEEEEECCEEcc
Q psy12725 67 KLGGRFDPPVIKESFSDETLNPGPNYYFKCIA-SGNPTPEISWYLDGKKLV 116 (119)
Q Consensus 67 ~v~~~~~~~~~~~~~~~~~~~~g~~~~l~C~~-~~~p~~~~~W~~~~~~~~ 116 (119)
.+.. .+|.+...+....+..|+.+.|.|.+ .+.|.+.+.|++++..+.
T Consensus 103 ~v~~--~~~~~~~~~~~~~~~~g~~v~l~C~~~~g~p~~~v~W~~~g~~~~ 151 (217)
T 2vr9_A 103 QIAV--LRDDFRVEPKDTRVAKGETALLECGPPKGIPEPTLIWIKDGVPLD 151 (217)
T ss_dssp EECE--ECCSCSBCCCCEEECTTSCEEECCBCCCEESCCEEEEEETTEEEC
T ss_pred EEEE--eCCCcEECCCccEEcCCCeEEEEEECCCCCCCCeEEEEECCcCCC
Confidence 4432 34555555555667899999999998 888999999999998876
No 60
>1hng_A CD2; T lymphocyte adhesion glycoprotein; 2.80A {Rattus rattus} SCOP: b.1.1.1 b.1.1.3
Probab=99.83 E-value=9.6e-20 Score=100.01 Aligned_cols=109 Identities=13% Similarity=0.217 Sum_probs=77.3
Q ss_pred CCccEEEEEEecc--CCCCeeEEeeCCccCC----------C------CCCCeEEEecCCCCCCeEEEEEEEcCCCCc--
Q psy12725 1 MLALKFFTCKYEG--NPVKTISWMKDGKPVP----------D------HNEPVFRIDSVRKEDKGMYQCVIRNEQESA-- 60 (119)
Q Consensus 1 ~g~~~~l~c~~~~--~~~~~v~w~~~~~~~~----------~------~~~~~l~~~~~~~~d~g~y~C~~~~~~~~~-- 60 (119)
+|+.|.|.|.... .+.+.|.|+|++..+. . ....+|.|.+++.+|+|.|.|.+.+..+..
T Consensus 10 ~G~~v~L~c~~~~~~~~~~~i~W~k~~~~i~~~~~~~~~~~~~~r~~~~~~gsL~I~~v~~~D~G~Y~C~~~n~~g~~~~ 89 (176)
T 1hng_A 10 LGHGINLNIPNFQMTDDIDEVRWERGSTLVAEFKRKMKPFLKSGAFEILANGDLKIKNLTRDDSGTYNVTVYSTNGTRIL 89 (176)
T ss_dssp TTSCEEECCTTCCCCTTEEEEEEEETTEEEEEEETTSCCEESSTTEEECTTSCEEESSCCGGGCEEEEEEEEETTCCEEE
T ss_pred cCCcEEEcCCCCCcccccccEEEEeCCceeEEEcCCCeecCCCCeEEECCCCcEEEcccccccCEEEEEEEEeCCCCEEE
Confidence 4899999994322 3566899999885321 1 124569999999999999999999987665
Q ss_pred eeEeeEEEeeecCCCeeeecCCccccCCCCcEEEEeEEccCCCCeEEEEECCEEccc
Q psy12725 61 QASGELKLGGRFDPPVIKESFSDETLNPGPNYYFKCIASGNPTPEISWYLDGKKLVN 117 (119)
Q Consensus 61 ~~~~~~~v~~~~~~~~~~~~~~~~~~~~g~~~~l~C~~~~~p~~~~~W~~~~~~~~~ 117 (119)
.....+.+......|.+.. .+..+.|.|.+.+.|.|.+.|+++|..+..
T Consensus 90 ~~~~~l~V~~~~~~p~i~~--------~~~~v~L~C~~~g~p~p~i~W~~~g~~l~~ 138 (176)
T 1hng_A 90 NKALDLRILEMVSKPMIYW--------ECSNATLTCEVLEGTDVELKLYQGKEHLRS 138 (176)
T ss_dssp EEEEEEEEECCCCCCEEEE--------ETTTTEEEEECSSCSSCEEEEEETTEEEEE
T ss_pred EEEEEEEEeCCCCCCEEEe--------cCCcEEEEEEecCCCCcEEEEEECCEECCC
Confidence 3334444433222233332 234589999999999999999999988754
No 61
>3bp6_B Programmed cell death 1 ligand 2; PD-1, PD-L2, complex, costimulation, glycoprotein, immunoglo domain, membrane, transmembrane, receptor; 1.60A {Mus musculus} PDB: 3bp5_B 3rnq_B 3bov_A 3rnk_B
Probab=99.82 E-value=1.5e-19 Score=100.82 Aligned_cols=111 Identities=17% Similarity=0.254 Sum_probs=79.2
Q ss_pred CCccEEEEEEeccCCC-----CeeEEee-CCccCCCC------------CCCeEEEecCCCCCCeEEEEEEEcCCCCcee
Q psy12725 1 MLALKFFTCKYEGNPV-----KTISWMK-DGKPVPDH------------NEPVFRIDSVRKEDKGMYQCVIRNEQESAQA 62 (119)
Q Consensus 1 ~g~~~~l~c~~~~~~~-----~~v~w~~-~~~~~~~~------------~~~~l~~~~~~~~d~g~y~C~~~~~~~~~~~ 62 (119)
.|+.+.|.|.+.+.+. +.+.|+| ++...... ....|.|.+++.+|+|.|.|.+.+..+....
T Consensus 16 ~G~~v~L~C~~~~~p~~~~~~~~v~W~k~~~~~~~~~~r~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~~~~~~~~~~~ 95 (202)
T 3bp6_B 16 VGSSVSLECDFDRRECTELEGIRASLQKVENDTSLQSERATLLEEQLPLGKALFHIPSVQVRDSGQYRCLVICGAAWDYK 95 (202)
T ss_dssp TTSCEEEEEEECTTC---CTTEEEEEEECC--CCCBCSSCEECGGGGGGTEEEEEECSCCGGGCEEEEEEEEETTEEEEE
T ss_pred CCCcEEEEEEecCCCCCCccceEEEEEcCCCcccccCCceEEeeccccCCeeEEEECCCCHHHCcEEEEEEEeCCCcceE
Confidence 4899999999988765 7899999 43322111 2367999999999999999999987654444
Q ss_pred EeeEEEeeecCCCeeeecCCccccCCCCcEEEEeEEccCCCCeEEEEECCEEc
Q psy12725 63 SGELKLGGRFDPPVIKESFSDETLNPGPNYYFKCIASGNPTPEISWYLDGKKL 115 (119)
Q Consensus 63 ~~~~~v~~~~~~~~~~~~~~~~~~~~g~~~~l~C~~~~~p~~~~~W~~~~~~~ 115 (119)
...+.+......|.+.. ....+|+.+.|.|.+.|.|.|.+.|++++..+
T Consensus 96 ~~~l~V~~~~~~p~~~~----~~~~~g~~v~l~C~~~g~P~p~v~W~~~~~~~ 144 (202)
T 3bp6_B 96 YLTVKVKASYMRIDTRI----LEVPGTGEVQLTCQARGYPLAEVSWQNVSVPA 144 (202)
T ss_dssp EEEEEEEBCCCCEEEEE----EECTTTCCEEEEEEEEEBSCCEEEETTCCSCC
T ss_pred EEEEEecCCCCcccEEE----EecCCCCeEEEEEEccccCCceEEEEeCCCCc
Confidence 45555543222233322 13467999999999999999999999877543
No 62
>2v9r_A Roundabout homolog 1; proto-oncogene, differentiation, phosphorylation, disease MU neuronal development, immunoglobulin domain, chemotaxis; 2.00A {Homo sapiens} PDB: 2v9q_A
Probab=99.82 E-value=2.1e-19 Score=100.70 Aligned_cols=115 Identities=29% Similarity=0.462 Sum_probs=83.9
Q ss_pred CCccEEEEEEeccCCCCeeEEeeCCccCCCC-----------CCCeEE-----EecCCCCCCeEEEEEEEcCCCCc-eeE
Q psy12725 1 MLALKFFTCKYEGNPVKTISWMKDGKPVPDH-----------NEPVFR-----IDSVRKEDKGMYQCVIRNEQESA-QAS 63 (119)
Q Consensus 1 ~g~~~~l~c~~~~~~~~~v~w~~~~~~~~~~-----------~~~~l~-----~~~~~~~d~g~y~C~~~~~~~~~-~~~ 63 (119)
.|+.+.|.|.+.+.|.+.+.|++++..+... ....+. +.+++..|.|.|.|.+.+..+.. ...
T Consensus 23 ~G~~v~l~C~~~~~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~~~n~~g~~~~~~ 102 (212)
T 2v9r_A 23 KGEPATLNCKAEGRPTPTIEWYKGGERVETDKDDPRSHRMLLPSGSLFFLRIVHGRKSRPDEGVYVCVARNYLGEAVSHD 102 (212)
T ss_dssp TTCCEEECCEEEEESCCEEEEEETTEECCCTTTCTTCSEEECTTSCEEESSCCCCSSCCCSCEEEEEEEEETTEEEECCC
T ss_pred CCCcEEEEEEcCCCCCCEEEEEECCEEeeccccccccceEEecCCcEEEEEEEecCCCcccCeEEEEEEECCCCceeecc
Confidence 3899999999988888899999998776432 122233 34458899999999999875432 223
Q ss_pred eeEEEeeecCCCeeeecCCccccCCCCcEEEEeEE-ccCCCCeEEEEECCEEccc
Q psy12725 64 GELKLGGRFDPPVIKESFSDETLNPGPNYYFKCIA-SGNPTPEISWYLDGKKLVN 117 (119)
Q Consensus 64 ~~~~v~~~~~~~~~~~~~~~~~~~~g~~~~l~C~~-~~~p~~~~~W~~~~~~~~~ 117 (119)
..+.+.. .++.+...+....+..|+.+.|.|.+ .+.|.+.+.|++++..+..
T Consensus 103 ~~l~V~~--~~~~~~~~~~~~~~~~g~~~~l~C~~~~~~p~~~v~W~~~~~~l~~ 155 (212)
T 2v9r_A 103 ASLEVAI--LRDDFRQNPSDVMVAVGEPAVMECQPPRGHPEPTISWKKDGSPLDD 155 (212)
T ss_dssp EEEEECE--ECSSCSBCCCCEEEETTSCEEEECBCCCEESCCEEEEEETTEEECT
T ss_pred eEEEEEe--ccccceeCCCceEecCCCcEEEEEecCCCCCCCEEEEEECCccCCC
Confidence 3444432 34444444555567899999999998 8889999999999988764
No 63
>1gsm_A Madcam-1, mucosal addressin cell adhesion molecule-1; cell adhesion protein, immunoglobulin fold, I-SET fold, cell adhesion glycoprotein; 1.9A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 PDB: 1bqs_A*
Probab=99.82 E-value=6e-19 Score=98.94 Aligned_cols=111 Identities=20% Similarity=0.284 Sum_probs=82.1
Q ss_pred CCccEEEEEEeccCCCC--eeEEeeCCccCC----CCCCCeEEEecCCCCCCeEEEEEEEcCCCCceeEeeEEEeeecCC
Q psy12725 1 MLALKFFTCKYEGNPVK--TISWMKDGKPVP----DHNEPVFRIDSVRKEDKGMYQCVIRNEQESAQASGELKLGGRFDP 74 (119)
Q Consensus 1 ~g~~~~l~c~~~~~~~~--~v~w~~~~~~~~----~~~~~~l~~~~~~~~d~g~y~C~~~~~~~~~~~~~~~~v~~~~~~ 74 (119)
.|+++.|.|.+ +.|.+ .|.|++.+..+. ......|.|.+++.+|+|.|.|.+.+..+.....+.+.|. ..|
T Consensus 21 ~G~sv~L~C~a-~~p~P~~~i~W~~~~~~l~~~~~~~~~~~L~I~~v~~~d~G~Y~C~a~n~~~~~~~~~~ltV~--~~P 97 (210)
T 1gsm_A 21 LGASRQLTCRL-ACADRGASVQWRGLDTSLGAVQSDTGRSVLTVRNASLSAAGTRVCVGSCGGRTFQHTVQLLVY--AFP 97 (210)
T ss_dssp TTCCEEEEEEE-CCSSTTCEEEEESSTTTTCCEEEESSEEEEEECSCCGGGCEEEEEEEEETTEEEEEEEEEEEE--BCC
T ss_pred CCCCEEEEEEC-CCCCCCcceEEeecccccCcEEecCCccEEEECccCcccCceEEEEEEeCCCceEEEEEEEEE--ecC
Confidence 48999999999 77777 999998654442 1235679999999999999999999976555445555553 233
Q ss_pred CeeeecCCccccCCCCcEEEEeEEccC-CC----CeEEEEECCEEccc
Q psy12725 75 PVIKESFSDETLNPGPNYYFKCIASGN-PT----PEISWYLDGKKLVN 117 (119)
Q Consensus 75 ~~~~~~~~~~~~~~g~~~~l~C~~~~~-p~----~~~~W~~~~~~~~~ 117 (119)
..+...+. ....|+.. |.|.+.+. |. +.+.|+|++..|..
T Consensus 98 ~~~~i~~~--~~~~g~~~-l~C~a~g~~P~~~~~lti~Wlk~~~~L~~ 142 (210)
T 1gsm_A 98 NQLTVSPA--ALVPGDPE-VACTAHKVTPVDPNALSFSLLVGGQELEG 142 (210)
T ss_dssp SEEEEESS--SBCTTCCE-EEEEEEEEBCCCTTTEEEEEEETTEECTT
T ss_pred CCcEEccc--eEEeCCce-EEEEeCCCCCCCCCCcEEEEEECCEEccc
Confidence 33333332 56778888 99999876 63 37999999999854
No 64
>3r06_A Anti-mouse CD3epsilon antibody 2C11 FAB light CHA; anti-CD3epsilon, T-cell receptor, signalling, IMMU; 2.50A {Cricetulus migratorius} PDB: 3r08_L 3ld8_B 3ldb_B*
Probab=99.82 E-value=1.5e-19 Score=101.57 Aligned_cols=117 Identities=14% Similarity=0.204 Sum_probs=83.3
Q ss_pred CCccEEEEEEeccCCCCeeEEeeCCc--cCC------------C---------CCCCeEEEecCCCCCCeEEEEEEEcCC
Q psy12725 1 MLALKFFTCKYEGNPVKTISWMKDGK--PVP------------D---------HNEPVFRIDSVRKEDKGMYQCVIRNEQ 57 (119)
Q Consensus 1 ~g~~~~l~c~~~~~~~~~v~w~~~~~--~~~------------~---------~~~~~l~~~~~~~~d~g~y~C~~~~~~ 57 (119)
.|+.+.|.|.+.+.+.+.+.|||... ... . .....|.|.+++.+|+|.|.|.+.+..
T Consensus 15 ~G~~v~L~C~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~D~G~Y~C~~~~~~ 94 (213)
T 3r06_A 15 LGDRVTINCQASQDISNYLNWYQQKPGKAPKLLIYYTNKLADGVPSRFSGSGSGRDSSFTISSLESEDIGSYYCQQYYNY 94 (213)
T ss_dssp TTCCEEEEEEESSCCTTCEEEEEECTTSCCEEEEETTTEECTTCCTTEEEEEETTEEEEEESSCCGGGCSEEEEEECSSS
T ss_pred CCCcEEEEEEeCCCcCceEEEEEECCCCCcEEEEEEcCcCCCCCCCcEEEeccCCEEEEEECCCCcccCEEEEEecccCC
Confidence 48999999999988888999998321 100 0 022379999999999999999998764
Q ss_pred CC-ceeEeeEEEeeecCCCeeeecCCccccCCCCcEEEEeEEccCCC--CeEEEEECCEEccc
Q psy12725 58 ES-AQASGELKLGGRFDPPVIKESFSDETLNPGPNYYFKCIASGNPT--PEISWYLDGKKLVN 117 (119)
Q Consensus 58 ~~-~~~~~~~~v~~~~~~~~~~~~~~~~~~~~g~~~~l~C~~~~~p~--~~~~W~~~~~~~~~ 117 (119)
+. ......+.+.....+|.+...+.......|+.+.|.|.+.+.++ +.+.|+++|..+..
T Consensus 95 ~~~~~~~~~l~V~~~~~~p~v~~~~~~~~~~~~~~v~l~C~~~g~~p~~~~v~W~k~g~~l~~ 157 (213)
T 3r06_A 95 PWTFGPGTKLEIKRADAKPTVSIFPPSSEQLGTGSATLVCFVNNFYPKDINVKWKVDGSEKRD 157 (213)
T ss_dssp SCEECCCEEEEECCCCBCCEEEEECCCHHHHTTTEEEEEEEEEEEBSSCEEEEEEETTEEECT
T ss_pred ceEEcCCceEEEeccCCCceeeeeCCCceecCCCCcEEEEEEeeecCCceEEEEEECCcccCC
Confidence 32 22233445433234677766555555557888999999987654 38999999998754
No 65
>1dr9_A B7-1 (CD80), T lymphocyte activation antigen; IG superfamily, immune system; HET: NAG; 3.00A {Homo sapiens} SCOP: b.1.1.1 b.1.1.3 PDB: 1i8l_A*
Probab=99.82 E-value=1.3e-19 Score=101.10 Aligned_cols=112 Identities=26% Similarity=0.429 Sum_probs=80.4
Q ss_pred CCccEEEEEEecc----CCCCeeEEeeCCccCC--------------------CCCCCeEEEecCCCCCCeEEEEEEEcC
Q psy12725 1 MLALKFFTCKYEG----NPVKTISWMKDGKPVP--------------------DHNEPVFRIDSVRKEDKGMYQCVIRNE 56 (119)
Q Consensus 1 ~g~~~~l~c~~~~----~~~~~v~w~~~~~~~~--------------------~~~~~~l~~~~~~~~d~g~y~C~~~~~ 56 (119)
+|+.|.|.|.+.+ .+.+.+.|++++..+. ......|.|.+++.+|+|.|.|.+.+.
T Consensus 8 ~G~~v~L~C~~~~~~~~~~~~~~~W~~~~~~i~~~~~~~~~~~~~~~~r~~~~~~~~~~L~I~~v~~~D~G~Y~C~~~~~ 87 (201)
T 1dr9_A 8 VKEVATLSCGHNVSVEELAQTRIYWQKEKKMVLTMMSGDMNIWPEYKNRTIFDITNNLSIVILALRPSDEGTYECVVLKY 87 (201)
T ss_dssp TTSCEEECCSCCCCTTHHHHCEEEEEETTEEEEEEETTEEEECHHHHTTEEEESTTTTEEEECSCCGGGCEEEEEEEEEC
T ss_pred eCCCEEEecccCCCcccccccEEEEEeCCcEEEEEeCCceeecCcccceeEEccCCCcEEEEecccchhCeEEEEEEEcC
Confidence 4899999999853 3567899999886541 224578999999999999999999997
Q ss_pred CCCce-----eEeeEEEeeecCCCeeeecCCccccCCCCcEEEEeEEc-cCCCCeEEEEECCEEcc
Q psy12725 57 QESAQ-----ASGELKLGGRFDPPVIKESFSDETLNPGPNYYFKCIAS-GNPTPEISWYLDGKKLV 116 (119)
Q Consensus 57 ~~~~~-----~~~~~~v~~~~~~~~~~~~~~~~~~~~g~~~~l~C~~~-~~p~~~~~W~~~~~~~~ 116 (119)
.+... ....+.+......|.+... ....|+.+.|.|.+. +.|.|.+.|+++|..+.
T Consensus 88 ~g~~~~~~~~~~~~l~V~~~~~~p~~~~~----~~~~g~~~~l~C~~~~g~P~p~i~W~k~g~~l~ 149 (201)
T 1dr9_A 88 EKDAFKREHLAEVTLSVKADFPTPSISDF----EIPTSNIRRIICSTSGGFPEPHLSWLENGEELN 149 (201)
T ss_dssp CTTSCEEEEEEEEEEEEECCCCCCEEEEE----ECSSTTEEEEEEEEEEESSCEEEEEEESSCEEC
T ss_pred CCCccccccccEEEEEEcCCCCCCceEec----cCCCCCeEEEEEecCCccCCCEEEEEECCEECc
Confidence 54432 2334444322222433332 124588899999994 88999999999998775
No 66
>3s97_C Contactin-1; carbonic anhdyrase like immunoglobulin, cell adhesion comple adhesion; HET: NAG; 2.30A {Homo sapiens}
Probab=99.82 E-value=9.9e-20 Score=101.18 Aligned_cols=116 Identities=24% Similarity=0.306 Sum_probs=85.8
Q ss_pred CCccEEEEEE-eccCCC-CeeEEeeCCccCCC---------CCCCeEEEecCCCCCCeEEEEEEEcCCCCcee-EeeEEE
Q psy12725 1 MLALKFFTCK-YEGNPV-KTISWMKDGKPVPD---------HNEPVFRIDSVRKEDKGMYQCVIRNEQESAQA-SGELKL 68 (119)
Q Consensus 1 ~g~~~~l~c~-~~~~~~-~~v~w~~~~~~~~~---------~~~~~l~~~~~~~~d~g~y~C~~~~~~~~~~~-~~~~~v 68 (119)
.|+.+.|.|. ..+.|. +.+.|++++..+.. .....|.|.+++.+|.|.|.|.+.+..+.... ...+.+
T Consensus 22 ~G~~v~L~C~~~~~~p~~~~v~W~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~~~~~~~~~~~~~~~~~~ 101 (201)
T 3s97_C 22 EGKGMVLLCDPPYHFPDDLSYRWLLNEFPVFITMDKRRFVSQTNGNLYIANVEASDKGNYSCFVSSPSITKSVFSKFIPL 101 (201)
T ss_dssp TTCCEEECCCCCSEESSCCEEEEEESSTTCBCCCSSSEEECTTTCCEEESSCCGGGCEEEEEEEEEGGGTEEEECCCEEE
T ss_pred CCCCEEEeccccccCCCceEEEEEECCceeeeeeCCCeEEEcCCCeEEECcCCcccCeEEEEEEEecCCCcchhhcccce
Confidence 4899999999 777787 89999999876632 23567999999999999999999986533322 112222
Q ss_pred eee------cCCCeeeecCCccccCCCCcEEEEeEEccCCCCeEEEEECCEEcc
Q psy12725 69 GGR------FDPPVIKESFSDETLNPGPNYYFKCIASGNPTPEISWYLDGKKLV 116 (119)
Q Consensus 69 ~~~------~~~~~~~~~~~~~~~~~g~~~~l~C~~~~~p~~~~~W~~~~~~~~ 116 (119)
.+. ..+|.+...+....+..|+.+.|.|.+.+.|.+.+.|++++..+.
T Consensus 102 ~~~~~~~~~~~~p~~~~~~~~~~~~~g~~~~l~C~~~g~p~p~v~W~~~~~~~~ 155 (201)
T 3s97_C 102 IPIPERTTKPYPADIVVQFKDVYALMGQNVTLECFALGNPVPDIRWRKVLEPMP 155 (201)
T ss_dssp EEECCSSCCCEEEEEEEECCCEEEETTCCEEEEEEEEEESCCEEEEEETTBCCC
T ss_pred eeccccccCCCCCceEecCCceEEecCCcEEEEEEccCCCCCceEEEeCCCcCC
Confidence 111 113444444445567889999999999999999999999988665
No 67
>3oq3_B IFN-alpha/beta binding protein C12R; mousepox virus, moscow strain, cytokine decoy RE virus/viral protein, type-1 interferon, soluble A/B-IFNR; HET: EPE; 2.10A {Ectromelia virus}
Probab=99.82 E-value=7.1e-19 Score=104.62 Aligned_cols=115 Identities=14% Similarity=0.100 Sum_probs=85.3
Q ss_pred CCccEEEEEEeccCC-CCeeEEeeCCccCCCC------CCCeEEEecCCCCCCeEEEEEEEcC--CCCceeE--eeEEEe
Q psy12725 1 MLALKFFTCKYEGNP-VKTISWMKDGKPVPDH------NEPVFRIDSVRKEDKGMYQCVIRNE--QESAQAS--GELKLG 69 (119)
Q Consensus 1 ~g~~~~l~c~~~~~~-~~~v~w~~~~~~~~~~------~~~~l~~~~~~~~d~g~y~C~~~~~--~~~~~~~--~~~~v~ 69 (119)
.|+.+.|.|.+.+.| .+.+.|++++..+... .+..|.|.+++.+|.|.|+|.+.|. .+..... ..+.+.
T Consensus 142 ~G~~v~L~C~~~g~p~~~~i~W~k~~~~l~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~n~~~~g~~~~~~s~~~~l~ 221 (329)
T 3oq3_B 142 DKYGIDLYCGILYAKHYNNITWYKNNQELIIDGTKYSQSGQNLIIHNPELEDSGRYDCYVHYDDVRIKNDIVVSRCKILT 221 (329)
T ss_dssp TTTCEEEECCCCSCCCCCEEEEEETTEECCCSSSSEEEETTEEEECSCCGGGCEEEEEEEEECCTTSSSCEEEEEEEEEE
T ss_pred CCCcEEEEeccCCCCCCceEEEEECCccCCCCCceEecCCCEEEEeecChhhCEEEEEEEEecccCCCceeEEEeeEEEE
Confidence 388999999999988 8999999999877421 2478999999999999999999986 4333322 223333
Q ss_pred eecCC--CeeeecCCccccCCCCcEEEEeEEccCC---CC-eEEEEECCEEc
Q psy12725 70 GRFDP--PVIKESFSDETLNPGPNYYFKCIASGNP---TP-EISWYLDGKKL 115 (119)
Q Consensus 70 ~~~~~--~~~~~~~~~~~~~~g~~~~l~C~~~~~p---~~-~~~W~~~~~~~ 115 (119)
+...+ ......+....+..|+.+.|.|.+.+.| .+ .+.|+++|..+
T Consensus 222 V~~~~~~~~~~~~~~~~~v~~G~~~~l~C~~~g~p~~~~~i~v~W~~~g~~i 273 (329)
T 3oq3_B 222 VIPSQDHRFKLILDPKINVTIGEPANITCTAVSTSLLVDDVLIDWENPSGWI 273 (329)
T ss_dssp EECCCCCCEEEECCSEEEECTTSCEEEEEEEEETTCCTTCCEEEEECTTSCB
T ss_pred EECCCCCCCceecCCeeEEecCCCEEEEEEEEECCCCCCCcEEEEEECCeee
Confidence 32222 0111244456688999999999999987 67 78999998764
No 68
>1f2q_A High affinity immunoglobulin epsilon receptor ALP subunit; immunoglobulin fold, glycoprotein, IGE-binding Pro immune system; HET: NAG MAN; 2.40A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 PDB: 1j86_A* 1rpq_A* 2y7q_A* 1f6a_A* 1j88_A* 1j89_A* 1j87_A*
Probab=99.82 E-value=2.2e-19 Score=98.33 Aligned_cols=109 Identities=19% Similarity=0.297 Sum_probs=80.6
Q ss_pred CCccEEEEEEeccCCCC-eeEEeeCCccCCCCCCCeEEEecCCCCCCeEEEEEEEcCCCCceeEeeEEEeeecCCCeeee
Q psy12725 1 MLALKFFTCKYEGNPVK-TISWMKDGKPVPDHNEPVFRIDSVRKEDKGMYQCVIRNEQESAQASGELKLGGRFDPPVIKE 79 (119)
Q Consensus 1 ~g~~~~l~c~~~~~~~~-~v~w~~~~~~~~~~~~~~l~~~~~~~~d~g~y~C~~~~~~~~~~~~~~~~v~~~~~~~~~~~ 79 (119)
.|+.+.|.|.+.+.+.+ .+.|++++..+.. ....|.|.+++..|.|.|.|.+.+.... ....+.+. .++....
T Consensus 18 ~G~~v~L~C~~~~~~~~~~i~W~~~~~~~~~-~~~~L~i~~v~~~d~G~Y~C~~~~~~~s--~~~~l~V~---~~~~~~~ 91 (176)
T 1f2q_A 18 KGENVTLTCNGNNFFEVSSTKWFHNGSLSEE-TNSSLNIVNAKFEDSGEYKCQHQQVNES--EPVYLEVF---SDWLLLQ 91 (176)
T ss_dssp TTCCEEEECCTTCC----CCEEEETTEECSC-CSSEEEECSCCGGGCEEEEEECTTSSCC--CCEEEEEE---CSSEEEE
T ss_pred cCCcEEEEEeCCCCCCcceEEEEECCeECCC-CceEEEEeccceecCEEEEEEcCCcccc--ccEEEEEe---Ccceeec
Confidence 48999999999887764 6999999988753 5789999999999999999999875432 23333332 2333332
Q ss_pred cCCccccCCCCcEEEEeEEc-cCCCCeEEEEECCEEcc
Q psy12725 80 SFSDETLNPGPNYYFKCIAS-GNPTPEISWYLDGKKLV 116 (119)
Q Consensus 80 ~~~~~~~~~g~~~~l~C~~~-~~p~~~~~W~~~~~~~~ 116 (119)
.....+.+|+.+.|.|.+. +.|.+.+.|+++|..+.
T Consensus 92 -~~~~~~~~g~~~~l~C~~~~~~p~~~~~W~~~g~~~~ 128 (176)
T 1f2q_A 92 -ASAEVVMEGQPLFLRCHGWRNWDVYKVIYYKDGEALK 128 (176)
T ss_dssp -ESCSEEETTSCEEEEEEEGGGCCEEEEEEEETTEECC
T ss_pred -CCcceeeCCCCEEEEEEecCCCCceEEEEEECCEEEe
Confidence 2334577999999999994 55667999999998874
No 69
>2fbo_J V1V2;, variable region-containing chitin-binding protein 3; immunoglobulin, VCBP, V-type, V SET, immune system; 1.85A {Branchiostoma floridae}
Probab=99.82 E-value=2.3e-19 Score=102.75 Aligned_cols=116 Identities=20% Similarity=0.342 Sum_probs=83.7
Q ss_pred CCccEEEEEEecc---CCCCeeEEeeCCccC-----------------------------C-C--------CCCCeEEEe
Q psy12725 1 MLALKFFTCKYEG---NPVKTISWMKDGKPV-----------------------------P-D--------HNEPVFRID 39 (119)
Q Consensus 1 ~g~~~~l~c~~~~---~~~~~v~w~~~~~~~-----------------------------~-~--------~~~~~l~~~ 39 (119)
.|+.+.|.|.+.+ .+.+.+.|++++... . . .....|.|.
T Consensus 16 ~G~~v~L~C~~~~~~~~~~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~L~I~ 95 (250)
T 2fbo_J 16 AGGTVELPCSYQLANDTQPPVISWLKGASPDRSTKVFKGNYNWQGEGLGFVESDSYKESFGDFLGRASVANLAAPTLRLT 95 (250)
T ss_dssp TTSCEEECCEEEECSCCSCCEEEEEEEEETTEEEEEEEEEECCCBTTBCCCTTSEEEEECGGGTTTEECSCTTSCCEEEC
T ss_pred cCCeEEEEEEeEcCCCCCceEEEEEeCCCCCccEEEEeeccccccccccccccccccccCCCcCceEEeccCCcceEEEe
Confidence 4899999999986 678899999976432 0 0 013589999
Q ss_pred cCCCCCCeEEEEEEEcCCCCce-----eEeeEEEeeecCCCeeeecC-CccccCCCCcEEEEeEEccCCCCeEEEEECCE
Q psy12725 40 SVRKEDKGMYQCVIRNEQESAQ-----ASGELKLGGRFDPPVIKESF-SDETLNPGPNYYFKCIASGNPTPEISWYLDGK 113 (119)
Q Consensus 40 ~~~~~d~g~y~C~~~~~~~~~~-----~~~~~~v~~~~~~~~~~~~~-~~~~~~~g~~~~l~C~~~~~p~~~~~W~~~~~ 113 (119)
+++.+|.|.|.|.+.+..+... ....+.+.....++.+.... ....+.+|+.+.|.|.+.+.|.|.+.|++++.
T Consensus 96 ~v~~~D~G~Y~C~~~~~~~~~~~~~~~~~~~l~V~~~~~~~~~~~~~~~~~~v~~g~~v~L~C~~~g~p~p~v~W~k~~~ 175 (250)
T 2fbo_J 96 HVHPQDGGRYWCQVAQWSIRTEFGLDAKSVVLKVTGHTPSNNVHVSTAEVVQVDEGNDITMTCPCTDCANANVTWYTGPT 175 (250)
T ss_dssp SCCGGGCEEEEEEEECTTCCSGGGEEEEEEEEEETTTSCCSCCEECCCSEEECCTTCCEEECCCEESCTTCEEEEEEEEE
T ss_pred eCChhhCeEEEEEeccCccCCcccccceeEEEEEeccCCCCeEEEecCceEEecCCCcEEEEEEecCCCCCeeEEEeCCC
Confidence 9999999999999998765332 23444443211234444332 33456789999999999999989999999987
Q ss_pred Ecc
Q psy12725 114 KLV 116 (119)
Q Consensus 114 ~~~ 116 (119)
.+.
T Consensus 176 ~~~ 178 (250)
T 2fbo_J 176 FFE 178 (250)
T ss_dssp CSS
T ss_pred ccc
Confidence 654
No 70
>1oll_A NK receptor; immune system/receptor, NK cell triggering receptor, immune system, IG domain, cytotoxicity, C2-type IG-like domains; 1.93A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4
Probab=99.81 E-value=2.7e-19 Score=99.02 Aligned_cols=112 Identities=15% Similarity=0.188 Sum_probs=80.4
Q ss_pred CCccEEEEEEeccCCCCeeEEeeCCccCC--------CCCCCeEEEecCCCCCCeEEEEEEEcCCCCce--eEeeEEEee
Q psy12725 1 MLALKFFTCKYEGNPVKTISWMKDGKPVP--------DHNEPVFRIDSVRKEDKGMYQCVIRNEQESAQ--ASGELKLGG 70 (119)
Q Consensus 1 ~g~~~~l~c~~~~~~~~~v~w~~~~~~~~--------~~~~~~l~~~~~~~~d~g~y~C~~~~~~~~~~--~~~~~~v~~ 70 (119)
.|+.|+|.|.+.+ +.+.+.|+|++..+. ......|.|.+++..|.|.|.|.+.+..+... ....+.+..
T Consensus 17 ~G~~v~L~C~~~~-~~~~~~w~k~g~~~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~~~~~~~~~~~s~~~~l~V~~ 95 (188)
T 1oll_A 17 KEKQVTICCQGNY-GAVEYQLHFEGSLFAVDRPKPPERINKVKFYIPDMNSRMAGQYSCIYRVGELWSEPSNLLDLVVTE 95 (188)
T ss_dssp TTCCEEEEEECCT-TCCEEEEEETTEEEEEECCSSCTTCCEEEEEESSCCGGGCEEEEEEEEETTEECCCCCCEEEEEES
T ss_pred CCCCEEEEEecCC-CCCEEEEEECCCcccccccccCCCcceeEEEeCcCCcccCeEEEEEecCCCCCCCCCCceEEEecc
Confidence 4899999999875 456899999987542 12346799999999999999999987532222 223444433
Q ss_pred ecCCCeeeecCCccccCCCCcEEEEeEEccCCCCeEEEEECCEEc
Q psy12725 71 RFDPPVIKESFSDETLNPGPNYYFKCIASGNPTPEISWYLDGKKL 115 (119)
Q Consensus 71 ~~~~~~~~~~~~~~~~~~g~~~~l~C~~~~~p~~~~~W~~~~~~~ 115 (119)
...+|.+...+ ...+.+|+.+.|.|.+.+ +.+.+.|+|+|..+
T Consensus 96 ~~~~p~i~~~p-~~~v~~G~~v~L~C~~~~-~~~~~~w~k~g~~~ 138 (188)
T 1oll_A 96 MYDTPTLSVHP-GPEVISGEKVTFYCRLDT-ATSMFLLLKEGRSS 138 (188)
T ss_dssp CSCCCEEEEES-CSEEETTCEEEEEEECSS-SCSEEEEEEESSSC
T ss_pred cCCCCeEEECC-CCccccCCEEEEEEEcCC-CCCEEEEEECCccc
Confidence 23456665444 345789999999999765 45689999988654
No 71
>1e07_A Carcinoembryonic antigen; glycoprotein, CEA, tumour marker, immunoglobulin-fold; NMR {Homo sapiens} PDB: 2dks_A
Probab=99.81 E-value=2.5e-18 Score=109.73 Aligned_cols=113 Identities=22% Similarity=0.406 Sum_probs=87.7
Q ss_pred CccEEEEEEeccCCCCeeEEeeCCccCCCC-------CCCeEEEecCCCCCCeEEEEEEEcCCCCceeEeeEEEeeecCC
Q psy12725 2 LALKFFTCKYEGNPVKTISWMKDGKPVPDH-------NEPVFRIDSVRKEDKGMYQCVIRNEQESAQASGELKLGGRFDP 74 (119)
Q Consensus 2 g~~~~l~c~~~~~~~~~v~w~~~~~~~~~~-------~~~~l~~~~~~~~d~g~y~C~~~~~~~~~~~~~~~~v~~~~~~ 74 (119)
|+.+.|.|.+.+ |.+.+.|++++..+... ....|.|.+++..|.|.|.|.+.+..+.. .+..+.+.+...+
T Consensus 126 g~~v~l~C~~~~-p~~~v~W~~~g~~l~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~n~~~~~-~s~~~~l~V~~~p 203 (642)
T 1e07_A 126 KDAVAFTCEPET-QDATYLWWVNNQSLPVSPRLQLSNGNRTLTLFNVTRNDTASYKCETQNPVSAR-RSDSVILNVLYGP 203 (642)
T ss_pred CCcEEEEEECCC-CCeeEEEEECCeECCCCCceEEcCCCCEEEEeCCCcccCeeEEEEEecCCCCc-ccceEEEEEEeCC
Confidence 778999999988 88999999998877532 34689999999999999999999876542 2223333333334
Q ss_pred CeeeecCCccccCCCCcEEEEeEEccCCCCeEEEEECCEEcc
Q psy12725 75 PVIKESFSDETLNPGPNYYFKCIASGNPTPEISWYLDGKKLV 116 (119)
Q Consensus 75 ~~~~~~~~~~~~~~g~~~~l~C~~~~~p~~~~~W~~~~~~~~ 116 (119)
+.+...+....+..|+.+.|.|.+.+.|.+.+.|+++|..+.
T Consensus 204 ~~~~~~~~~~~~~~G~~~~l~C~~~g~p~~~i~W~~~g~~i~ 245 (642)
T 1e07_A 204 DAPTISPLNTSYRSGENLNLSCHAASNPPAQYSWFVNGTFQQ 245 (642)
T ss_pred CCcEEecCCcccccCCEEEEEEEcCCCCCcEEEEEECCeEcc
Confidence 444444555568899999999999999999999999998874
No 72
>3sob_L Antibody light chain; beta propeller, protein binding-immune system complex; 1.90A {Homo sapiens} PDB: 1pkq_A 3u1s_L*
Probab=99.81 E-value=2.7e-19 Score=101.83 Aligned_cols=117 Identities=13% Similarity=0.233 Sum_probs=82.8
Q ss_pred CCccEEEEEEeccCCCCeeEEeeCC--ccC-----------CC----------CCCCeEEEecCCCCCCeEEEEEEEcCC
Q psy12725 1 MLALKFFTCKYEGNPVKTISWMKDG--KPV-----------PD----------HNEPVFRIDSVRKEDKGMYQCVIRNEQ 57 (119)
Q Consensus 1 ~g~~~~l~c~~~~~~~~~v~w~~~~--~~~-----------~~----------~~~~~l~~~~~~~~d~g~y~C~~~~~~ 57 (119)
.|+.+.|.|.+.+.+.+.+.|||.. ... .. .....|.|.+++.+|+|.|.|.+.+..
T Consensus 38 ~G~~v~L~C~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~D~G~Y~C~~~~~~ 117 (237)
T 3sob_L 38 VGDRVTITCRASQDVSTAVAWYQQKPGKAPKLLIYSASFLYSGVPSRFSGSGSGTDFTLTISSLQPEDFATYYCQQSYTT 117 (237)
T ss_dssp TTCCEEEEEEESSCCTTCEEEEEECTTSCCEEEEETTTEECTTCCTTEEEEEETTEEEEEESSCCGGGCEEEEEEECSSS
T ss_pred CCCcEEEEEecCCCCCceEEEEEECCCCCCEEEEEeccccCCCCCCcEEEEcCCCEEEEEECCCChhhCeEEEEeeccCC
Confidence 4899999999998888899999842 110 00 123469999999999999999998765
Q ss_pred CC-ceeEeeEEEeeecCCCeeeecCCccccCCCCcEEEEeEEccC-C-CCeEEEEECCEEccc
Q psy12725 58 ES-AQASGELKLGGRFDPPVIKESFSDETLNPGPNYYFKCIASGN-P-TPEISWYLDGKKLVN 117 (119)
Q Consensus 58 ~~-~~~~~~~~v~~~~~~~~~~~~~~~~~~~~g~~~~l~C~~~~~-p-~~~~~W~~~~~~~~~ 117 (119)
+. ......+.+.....+|.+...+.......|+.+.|.|.+.+. | .+.+.|+++|..+..
T Consensus 118 ~~~~~~~~~l~V~~~~~~p~v~~~~~~~~~~~g~~v~l~C~~~~~~p~~~~v~W~k~g~~~~~ 180 (237)
T 3sob_L 118 PPTFGQGTKVEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSG 180 (237)
T ss_dssp SCEECCCEEEEEECCCBCCEEEEECCCHHHHHHTEEEEEEEEEEEBSSCCEEEEEETTEECCS
T ss_pred ceEEcCcEEEEEecCCCCCceEEeCCChhhccCCceEEEEEEcccCCCceEEEEEECCCCCCC
Confidence 32 122334444433346666655544444568889999999874 4 479999999998763
No 73
>3s96_B 3B5H10 FAB light chain; huntingtin, immune system; 1.90A {Mus musculus} PDB: 2qhr_L 3ffd_B 4dcq_A
Probab=99.81 E-value=2.3e-19 Score=101.06 Aligned_cols=117 Identities=17% Similarity=0.365 Sum_probs=80.7
Q ss_pred CCccEEEEEEeccC-CCCeeEEeeCC--ccC-------------C------------CCCCCeEEEecCCCCCCeEEEEE
Q psy12725 1 MLALKFFTCKYEGN-PVKTISWMKDG--KPV-------------P------------DHNEPVFRIDSVRKEDKGMYQCV 52 (119)
Q Consensus 1 ~g~~~~l~c~~~~~-~~~~v~w~~~~--~~~-------------~------------~~~~~~l~~~~~~~~d~g~y~C~ 52 (119)
.|+.|.|.|.+.+. +.+.+.|||.. ... . ......|.|.+++.+|+|.|.|.
T Consensus 14 ~G~~v~L~C~~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~D~G~Y~C~ 93 (218)
T 3s96_B 14 LGASAKLTCTLNSQHSTYTIEWYQQQPLKPPKYVMELKKDGSHSTGDGIPDRFSGSSSGADRYLSISNIQPEDEAIYICG 93 (218)
T ss_dssp TTSCEEEEEEECGGGTTCCEEEEEECTTSCCEEEEEECTTSCEEECSSCCTTEEEEEETTEEEEEESSCCGGGCEEEEEE
T ss_pred CCCcEEEEEECCCCCCCcEEEEEEECCCCCeEEEEEEcccCccccCCCcccceEEecCCceEEEEEccCCcccCEEEEEE
Confidence 48999999999988 88899999832 100 0 00124599999999999999999
Q ss_pred EEcCCC-----CceeEeeEEEeeec-CCCeeeecCCccccCCCCcEEEEeEEcc-CCCC-eEEEEECCEEccc
Q psy12725 53 IRNEQE-----SAQASGELKLGGRF-DPPVIKESFSDETLNPGPNYYFKCIASG-NPTP-EISWYLDGKKLVN 117 (119)
Q Consensus 53 ~~~~~~-----~~~~~~~~~v~~~~-~~~~~~~~~~~~~~~~g~~~~l~C~~~~-~p~~-~~~W~~~~~~~~~ 117 (119)
+.+..+ .......+.+.... .+|.+...+.......|+.+.|.|.+.+ .|.+ .+.|+++|..+..
T Consensus 94 ~~~~~~~~~~~~~~~~~~l~V~~~~~~~P~~~~~~~~~~~~~~~~v~L~C~~~g~~p~~~~v~W~k~g~~l~~ 166 (218)
T 3s96_B 94 VGDTIKEQFVYVFGGGTKVTVLGQPKSTPTLTVFPPSSEELKENKATLVCLISNFSPSGVTVAWKANGTPITQ 166 (218)
T ss_dssp EEEEETTEEEEEECCCEEEEEESCCCBCCEEEEECCCHHHHHTTEEEEEEEEEEEBSSCCEEEEEETTEEC--
T ss_pred EecCCCCceeEEEcCcEEEEEecCCCCCceEEeeCCCcccccCCcEEEEEEECcccCCCeEEEEEECCEECcC
Confidence 988654 12223344443211 3566665444444456789999999987 4666 8999999998754
No 74
>1e07_A Carcinoembryonic antigen; glycoprotein, CEA, tumour marker, immunoglobulin-fold; NMR {Homo sapiens} PDB: 2dks_A
Probab=99.80 E-value=2.4e-18 Score=109.82 Aligned_cols=114 Identities=24% Similarity=0.434 Sum_probs=90.6
Q ss_pred CCccEEEEEEeccCCCCeeEEeeCCccCCCC-------CCCeEEEecCCCCCCeEEEEEEEcCCCCcee-EeeEEEeeec
Q psy12725 1 MLALKFFTCKYEGNPVKTISWMKDGKPVPDH-------NEPVFRIDSVRKEDKGMYQCVIRNEQESAQA-SGELKLGGRF 72 (119)
Q Consensus 1 ~g~~~~l~c~~~~~~~~~v~w~~~~~~~~~~-------~~~~l~~~~~~~~d~g~y~C~~~~~~~~~~~-~~~~~v~~~~ 72 (119)
.|+.+.|.|.+.+ +.+.+.|++++..+... ....|.|.+++..|.|.|.|.+.|..+.... ...+.+. .
T Consensus 481 ~g~~v~l~C~~~~-~~~~i~W~~~g~~l~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~n~~g~~~s~~~~l~V~--~ 557 (642)
T 1e07_A 481 DKDAVAFTCEPEA-QNTTYLWWVNGQSLPVSPRLQLSNGNRTLTLFNVTRNDARAYVCGIQNSVSANRSDPVTLDVL--Y 557 (642)
T ss_pred CCCeEEEEEECCC-CCcEEEEEECCEeCCCCCcEEEcCCCcEEEEeecChhcCceEEEEeEcCCCCccCCCEEEEEE--e
Confidence 3889999999984 78899999999877532 2468999999999999999999998765332 3444443 3
Q ss_pred CCCeeeecCCccccCCCCcEEEEeEEccCCCCeEEEEECCEEccc
Q psy12725 73 DPPVIKESFSDETLNPGPNYYFKCIASGNPTPEISWYLDGKKLVN 117 (119)
Q Consensus 73 ~~~~~~~~~~~~~~~~g~~~~l~C~~~~~p~~~~~W~~~~~~~~~ 117 (119)
.|+.+...+....+..|+.+.|.|.+.+.|.+.+.|+++|..+..
T Consensus 558 ~p~~~~~~~~~~~v~~g~~~~l~C~~~g~p~p~v~W~~~g~~i~~ 602 (642)
T 1e07_A 558 GPDTPIISPPDSSYLSGANLNLSCHSASNPSPQYSWRINGIPQQH 602 (642)
T ss_pred CCCcceecCCceeEEcCCcEEEEEEeccCCCCeEEEEECCEECcc
Confidence 455555555566788999999999999999999999999998764
No 75
>3qs9_E FL cytokine receptor; immunoglobulin-like domain, four-helical bundle cytokine, hematopoietic cytokine-receptor complex, cell surface, EXTR complex; 7.80A {Homo sapiens}
Probab=99.80 E-value=4.3e-19 Score=111.45 Aligned_cols=111 Identities=16% Similarity=0.272 Sum_probs=84.8
Q ss_pred CCccEEEEEEec-cCCCCeeEEeeCCccCCCC---------------CCCeEEEecCCCCCCeEEEEEEEcCCCCceeEe
Q psy12725 1 MLALKFFTCKYE-GNPVKTISWMKDGKPVPDH---------------NEPVFRIDSVRKEDKGMYQCVIRNEQESAQASG 64 (119)
Q Consensus 1 ~g~~~~l~c~~~-~~~~~~v~w~~~~~~~~~~---------------~~~~l~~~~~~~~d~g~y~C~~~~~~~~~~~~~ 64 (119)
.|+.+.|.|.+. +.|.+.|.|++++..+... ....|.|.+++.+|.|.|+|.+.|. .....
T Consensus 241 ~G~~v~L~C~~~~g~p~p~i~W~k~g~~l~~~~~~~~~~~~~~~~~~~~~~L~I~~v~~~DsG~Y~C~a~N~---~~~~~ 317 (527)
T 3qs9_E 241 VGEPLWIRCKAVHVNHGFGLTWELENKALEEGNYFEMSTYSTNRTMIRILFAFVSSVARNDTGYYTCSSSKH---PSQSA 317 (527)
T ss_dssp TTSCEEEEEEEEESSSCCCEEEECSSSCCCGGGEEEEEEEETTTEEEEEEEEEESSCCGGGCEEEEEEETTE---EEEEE
T ss_pred CCCeEEEEEEEccCCCCeEEEEEECCEECCCCceeeeeeeccCcceeeEEEEEEccCCcccCeEEEEEEEeC---CCceE
Confidence 489999999996 8889999999998865431 1134899999999999999999987 33344
Q ss_pred eEEEeeecCCCeeeecC--CccccCCCCcEEEEeEEccCCCCeEEEEECCEEccc
Q psy12725 65 ELKLGGRFDPPVIKESF--SDETLNPGPNYYFKCIASGNPTPEISWYLDGKKLVN 117 (119)
Q Consensus 65 ~~~v~~~~~~~~~~~~~--~~~~~~~g~~~~l~C~~~~~p~~~~~W~~~~~~~~~ 117 (119)
.+.+. .+|.+...+ ....+.+|+.+.|.|.+.+.|.|.+.|+++|..+..
T Consensus 318 ~L~V~---~~p~i~~~~~~~~~~v~~G~~v~L~C~~~g~P~p~i~W~k~g~~l~~ 369 (527)
T 3qs9_E 318 LVTIV---EKGFINATNSSEDYEIDQYEEFCFSVRFKAYPQIRCTWTFSRKSFPC 369 (527)
T ss_dssp EEEEC-----CEEECCCSCCEECCCTTCCCCEEEEEEEESCCEEEEEETTEEEEC
T ss_pred EEEEE---ccCccccccCcccEEEcCCCeEEEEEEEEecCCCEEEEEECCEECcC
Confidence 44442 345444333 234577899999999999999999999999998854
No 76
>2if7_A SLAM family member 6; NTB-A, homophilic receptor, immune system; 3.00A {Homo sapiens}
Probab=99.80 E-value=1.2e-18 Score=96.89 Aligned_cols=114 Identities=12% Similarity=0.256 Sum_probs=77.9
Q ss_pred CCccEEEEEEecc-CCCCeeEEeeCCccCC----C--------------------CCCCeEEEecCCCCCCeEEEEEEEc
Q psy12725 1 MLALKFFTCKYEG-NPVKTISWMKDGKPVP----D--------------------HNEPVFRIDSVRKEDKGMYQCVIRN 55 (119)
Q Consensus 1 ~g~~~~l~c~~~~-~~~~~v~w~~~~~~~~----~--------------------~~~~~l~~~~~~~~d~g~y~C~~~~ 55 (119)
+|+.|+|.|.+.+ .+.+.|.|++++..+. . ..+.+|.|.+++.+|+|.|.|.+.+
T Consensus 12 ~G~~v~L~C~~~~~~~~~~v~W~~~~~~i~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~sL~I~~v~~~D~G~Y~C~~~~ 91 (193)
T 2if7_A 12 LGESVTLPLEFPAGEKVNFITWLFNETSLAFIVPHETKSPEIHVTNPKQGKRLNFTQSYSLQLSNLKMEDTGSYRAQIST 91 (193)
T ss_dssp TTSCEEECCCCCCCSCCCEEEEEETTEEEEEEECCSSSCCEEEECCHHHHTTEEECTTCCEEECSCCGGGCEEEEEEEEC
T ss_pred ecCeEEEeccCCCcccccEEEEEECCEEEEEEecccCCCCceeecCccccccEEECCCeEEEECCCCcccCceEEEEEEe
Confidence 4899999999875 3557899999864321 0 1246799999999999999999998
Q ss_pred CCCCceeEeeEEEeeecCCCeeeecCCccccCCCC-cEEEEeEEccC-CCCeEEEEECCEEcc
Q psy12725 56 EQESAQASGELKLGGRFDPPVIKESFSDETLNPGP-NYYFKCIASGN-PTPEISWYLDGKKLV 116 (119)
Q Consensus 56 ~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~g~-~~~l~C~~~~~-p~~~~~W~~~~~~~~ 116 (119)
..+.......+.|......|.+.... .....|. .+.|.|.+.+. |.|.+.|+++|..+.
T Consensus 92 ~~~~~~~~~~L~V~~~~~~p~i~~~~--~~~~~g~~~v~L~C~~~g~~p~p~i~W~~~g~~l~ 152 (193)
T 2if7_A 92 KTSAKLSSYTLRILRQLRNIQVTNHS--QLFQNMTCELHLTCSVEDADDNVSFRWEALGNTLS 152 (193)
T ss_dssp SSCEEEEEEEEEEECCCEEEEEEECC--C---CSSEEEEEEEEEESCCTTCEEEEEETTEEEE
T ss_pred cCCCeEEEEEEEEEccCCCCeEecCc--eeecCCCceEEEEEEEecCCCceEEEEEeCCEEcC
Confidence 76554444445543211123333322 1233455 79999999885 478999999998654
No 77
>3rjd_A High affinity immunoglobulin gamma FC receptor I; immune system; HET: NAG MAN FUC P33; 2.65A {Homo sapiens}
Probab=99.80 E-value=1.3e-18 Score=100.20 Aligned_cols=115 Identities=18% Similarity=0.249 Sum_probs=87.9
Q ss_pred CCccEEEEEEe-ccCCCCeeEEeeCCccCCCC-CCCeEEEecCCCCCCeEEEEEEEcCCCCceeEeeEEEeeecCCCeee
Q psy12725 1 MLALKFFTCKY-EGNPVKTISWMKDGKPVPDH-NEPVFRIDSVRKEDKGMYQCVIRNEQESAQASGELKLGGRFDPPVIK 78 (119)
Q Consensus 1 ~g~~~~l~c~~-~~~~~~~v~w~~~~~~~~~~-~~~~l~~~~~~~~d~g~y~C~~~~~~~~~~~~~~~~v~~~~~~~~~~ 78 (119)
.|+.+.|.|.+ .+.|.+.+.|++++..+... ....|.|..++..|.|.|.|.+.+..+.......+.+.....+|.+.
T Consensus 96 ~g~~v~l~C~~~~~~p~~~v~W~~~g~~~~~~~~~~~l~i~~~~~~d~G~Y~C~~~n~~~~~~~~~~l~V~~~~~~p~~~ 175 (262)
T 3rjd_A 96 EGEPLALRCHAWKDKLVYNVLYYRNGKAFKFFHWNSNLTILKTNISHNGTYHCSGMGKHRYTSAGISVTVKELFPAPVLN 175 (262)
T ss_dssp TTSCEEEEEEEGGGCCCEEEEEEETTEEEEEEEECCCEEESSCCGGGCEEEEEEEESSSEEEEECEEEEEECSSCCCEEE
T ss_pred cCCeEEEEEEccCCCCCceEEEEECCccccccCCCCeEEEEECChhhCEEEEEEEeCCCCccccceEEEeccCCCCCeEe
Confidence 38899999999 66678899999999876543 36789999999999999999999986444344455554333456665
Q ss_pred ecCCccccCCCCcEEEEeEEccCCC-C----eEEEEECCEEcc
Q psy12725 79 ESFSDETLNPGPNYYFKCIASGNPT-P----EISWYLDGKKLV 116 (119)
Q Consensus 79 ~~~~~~~~~~g~~~~l~C~~~~~p~-~----~~~W~~~~~~~~ 116 (119)
..+ ...+..|+.+.|.|.+.+.|. + .+.|++++..+.
T Consensus 176 ~~~-~~~~~~g~~~~l~C~~~~~p~~p~~~~~~~w~~~~~~~~ 217 (262)
T 3rjd_A 176 ASV-TSPLLEGNLVTLSCETKLLLQRPGLQLYFSFYMGSKTLR 217 (262)
T ss_dssp ESS-CSSEETTCCEEEEEECCCCCC-----EEEEEEETTEEEE
T ss_pred ecC-ceeecCCCeEEEEeEcccCCCCCCccEEEEEEeCCcEec
Confidence 544 456788999999999988875 4 378999998775
No 78
>3qs7_E FL cytokine receptor; immunoglobulin-like domain, four-helical bundle cytokine, CY receptor complex, extracellular complex; HET: NAG; 4.30A {Homo sapiens}
Probab=99.80 E-value=8e-19 Score=107.71 Aligned_cols=111 Identities=13% Similarity=0.122 Sum_probs=76.7
Q ss_pred CCccEEEEEEeccCCCCeeEEeeCCccCCCC------C--CCeEEEecCCCCCCeEEEEEEEcCCCCceeEeeEEEeeec
Q psy12725 1 MLALKFFTCKYEGNPVKTISWMKDGKPVPDH------N--EPVFRIDSVRKEDKGMYQCVIRNEQESAQASGELKLGGRF 72 (119)
Q Consensus 1 ~g~~~~l~c~~~~~~~~~v~w~~~~~~~~~~------~--~~~l~~~~~~~~d~g~y~C~~~~~~~~~~~~~~~~v~~~~ 72 (119)
.|+.+.|.|.+.+.|.+.|.|++++..+... . ...|.|.+++.+|.|.|+|.+.|..+.......+.|.
T Consensus 62 ~G~~v~L~C~v~g~P~p~i~W~~~~~~l~~~~~~~~~~~~~~sL~I~~v~~~D~G~Y~C~a~N~~g~~~~~~~l~V~--- 138 (423)
T 3qs7_E 62 VSASITLQVLVDAPGNISCLWVFKHSSLNCQPHFDLQNRGVVSMVILKMTETQAGEYLLFIQSEATNYTILFTVSIR--- 138 (423)
T ss_dssp SSCCEEEEEECSCCSSCEEEEEETTEEECCCCBC-----CEEEEEESSCCSSSCSEEEEEEEC--CEEEEEEEEEEC---
T ss_pred cCCcEEEEEEEEcCCCCeEEEEECCCccCccceeccccceEEEEEEeecCcccCEEEEEEEEcCCCcEEEEEEEEEe---
Confidence 4899999999999999999999988654321 1 1358999999999999999999987655544555543
Q ss_pred CCCeeeecCCccccCCCCcEEEEeEEccCCCCeEEEEECCEEc
Q psy12725 73 DPPVIKESFSDETLNPGPNYYFKCIASGNPTPEISWYLDGKKL 115 (119)
Q Consensus 73 ~~~~~~~~~~~~~~~~g~~~~l~C~~~~~p~~~~~W~~~~~~~ 115 (119)
.+|.+... .......|+.+.|.|.+.|.|.|.+.|++++..+
T Consensus 139 ~~p~~~~~-~p~~~~~~~~~~L~C~a~G~P~P~i~W~k~~~~~ 180 (423)
T 3qs7_E 139 NTLLYTLR-RPYFRKMENQDALVCISESVPEPIVEWVLCDSQG 180 (423)
T ss_dssp -----CEE-EEEEEECSSSSCEEEEEEESSCCEEEEEEC----
T ss_pred cCcccccc-CCcEeccCCceEEEEEEeeecCCeEEEEECCCCC
Confidence 23333211 1122345777889999999999999999987654
No 79
>2ec8_A MAST/stem cell growth factor receptor; glycoprotein, receptor tyrosine kinase, growth factor cytoki dimerization, transferase; HET: NAG; 3.00A {Homo sapiens} PDB: 2e9w_A*
Probab=99.80 E-value=8.3e-19 Score=109.72 Aligned_cols=114 Identities=19% Similarity=0.297 Sum_probs=90.0
Q ss_pred CCccEEEEEEeccCCCCe-eEEeeCCccC--CC------------CCCCeEEEecCCCCCCeEEEEEEEcCCCCceeEee
Q psy12725 1 MLALKFFTCKYEGNPVKT-ISWMKDGKPV--PD------------HNEPVFRIDSVRKEDKGMYQCVIRNEQESAQASGE 65 (119)
Q Consensus 1 ~g~~~~l~c~~~~~~~~~-v~w~~~~~~~--~~------------~~~~~l~~~~~~~~d~g~y~C~~~~~~~~~~~~~~ 65 (119)
.|+.+.|.|.+.+.|.+. +.|++++..+ .. .....|.|.+++..|.|.|.|.+.+..+.......
T Consensus 225 ~G~~v~L~C~~~g~p~p~~i~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~I~~~~~~D~G~Y~C~a~n~~g~~~~~~~ 304 (524)
T 2ec8_A 225 EGEEFTVTCTIKDVSSSVYSTWKRENSQTKLQEKYNSWHHGDFNYERQATLTISSARVNDSGVFMCYANNTFGSANVTTT 304 (524)
T ss_dssp TTSCEEEEEEEEESSTTCEEEEEETTCSCCCCEEEEEEECSSSCEEEEEEEEESSCCTTTCEEEEEEEECSSCEEEEEEE
T ss_pred cCCcEEEEEEEecCCCcEEEEEEeCCCCCccccccccccccCCccceEEEEEECCCCHHHCEEEEEEEEecCCceEEEEE
Confidence 489999999999888776 9999998873 21 12367899999999999999999998776655555
Q ss_pred EEEeeecCCCeeeecCC---ccccCCCCcEEEEeEEccCCCCe-EEEEECCEEccc
Q psy12725 66 LKLGGRFDPPVIKESFS---DETLNPGPNYYFKCIASGNPTPE-ISWYLDGKKLVN 117 (119)
Q Consensus 66 ~~v~~~~~~~~~~~~~~---~~~~~~g~~~~l~C~~~~~p~~~-~~W~~~~~~~~~ 117 (119)
+.+. .+|.+...+. ...+.+|+.+.|.|.+.+.|.|. +.|+++|..+..
T Consensus 305 l~V~---~~p~~~~~~~~~~~~~v~~G~~v~l~C~~~g~P~p~~v~W~k~g~~~~~ 357 (524)
T 2ec8_A 305 LEVV---DKGFINIFPMINTTVFVNDGENVDLIVEYEAFPKPEHQQWIYMNRTFTD 357 (524)
T ss_dssp EEEE---SSCEEEEEESSCSEEEECTTCCEEEEEEEEEESCCCEEEEESSSCBCSS
T ss_pred EEEe---ccCceEeecCCCceEEEcCCCcEEEEEEEeecCCCcEEEEEECCeeccC
Confidence 5553 4566554432 45678999999999999999998 999999987654
No 80
>4dep_C Interleukin-1 receptor accessory protein; B-trefoil, immunoglobulin, immune system, extracellular; HET: NAG; 3.10A {Homo sapiens} PDB: 3o4o_B*
Probab=99.80 E-value=3.4e-19 Score=106.49 Aligned_cols=117 Identities=20% Similarity=0.343 Sum_probs=74.5
Q ss_pred CCccEEEEEEe-----ccCCCCeeEEeeCCccCCCC-----CCCeEEEecCCCCCCeEEEEEEEcCCCCce--eEeeEEE
Q psy12725 1 MLALKFFTCKY-----EGNPVKTISWMKDGKPVPDH-----NEPVFRIDSVRKEDKGMYQCVIRNEQESAQ--ASGELKL 68 (119)
Q Consensus 1 ~g~~~~l~c~~-----~~~~~~~v~w~~~~~~~~~~-----~~~~l~~~~~~~~d~g~y~C~~~~~~~~~~--~~~~~~v 68 (119)
.|+.+.|.|.. .+.|.+.+.|++++..+... ....|.|.+++.+|.|.|+|.+.+..+... ....+.+
T Consensus 134 ~g~~~~l~C~~~~~~~~g~p~~~v~W~k~~~~l~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~n~~~g~~~~~~~~~~l 213 (349)
T 4dep_C 134 EYGIQRITCPNVDGYFPSSVKPTITWYMGCYKIQNFNNVIPEGMNLSFLIALISNNGNYTCVVTYPENGRTFHLTRTLTV 213 (349)
T ss_dssp TCSEEEEECCSCTTSSCTTSCCEEEEEETTEECCSCSSEEEETTEEEEESCCGGGCEEEEEEEEEEETTEEEEEEEEEEE
T ss_pred cCccEEEEcCCCcccccCCCCceEEEeeCCEECCCccceeecCCEEEEeeeeecCCcEEEEEEEEeeCCEEEEEEEEEEE
Confidence 37889999984 66788999999999887542 246799999999999999999998752222 2333333
Q ss_pred eeecC-----CCeeeecCCcc--ccCCCCcEEEEeEEc----cCCCCeEEEEECCEEccc
Q psy12725 69 GGRFD-----PPVIKESFSDE--TLNPGPNYYFKCIAS----GNPTPEISWYLDGKKLVN 117 (119)
Q Consensus 69 ~~~~~-----~~~~~~~~~~~--~~~~g~~~~l~C~~~----~~p~~~~~W~~~~~~~~~ 117 (119)
.+... +|.+....... .+..|+.+.|.|.+. +.|.+.+.|+++|..+..
T Consensus 214 ~v~~~~~~~~~p~i~~~~~~~~~~v~~G~~v~l~C~~~~~~~g~p~p~v~W~~~g~~l~~ 273 (349)
T 4dep_C 214 KVVGSPKNAVPPVIHSPNDHVVYEKEPGEELLIPCTVYFSFLMDSRNEVWWTIDGKKPDD 273 (349)
T ss_dssp EEECCGGGCCSCEEC----------------CCCEEEEECCCTTCCCEEEEESSCC----
T ss_pred EEEccCCCCCCCeEecCCCceeEEEecCCcEEEEEEEEEccCCCCCCEEEEEECCEEccc
Confidence 33222 45554443322 677899999999987 568889999999987654
No 81
>3tv3_L PGT128 light chain, IG lambda-2 chain C regions; FAB, HIV-1 neutralizing antibody, GP120, immune system; HET: PCA MAN GOL EPE; 1.29A {Homo sapiens} PDB: 3tyg_L* 3twc_L* 3tnm_L 2mcg_1 1mcw_M 1a8j_L 3mcg_1 1dcl_A 1mcb_A* 1mcc_A* 1mcd_A* 1mce_A* 1mcf_A* 1mch_A 1mci_A* 1mcj_A* 1mck_A 1mcl_A* 1mcn_A* 1mcq_A ...
Probab=99.80 E-value=4.9e-19 Score=99.34 Aligned_cols=115 Identities=14% Similarity=0.196 Sum_probs=81.7
Q ss_pred CCccEEEEEEeccCCCCeeEEeeC--CccCC------------C---------CCCCeEEEecCCCCCCeEEEEEEEcCC
Q psy12725 1 MLALKFFTCKYEGNPVKTISWMKD--GKPVP------------D---------HNEPVFRIDSVRKEDKGMYQCVIRNEQ 57 (119)
Q Consensus 1 ~g~~~~l~c~~~~~~~~~v~w~~~--~~~~~------------~---------~~~~~l~~~~~~~~d~g~y~C~~~~~~ 57 (119)
.|+.|.|.|.+. +.+.+.|||+ +.... . .....|.|.+++.+|+|.|.|.+.+..
T Consensus 14 ~G~~v~L~C~~~--~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~D~G~Y~C~~~~~~ 91 (211)
T 3tv3_L 14 PGQSITISCTGT--SNNFVSWYQQHAGKAPKLVIYDVNKRPSGVPDRFSGSKSGNTASLTVSGLQTDDEAVYYCGSLVGN 91 (211)
T ss_dssp TTCEEEEEEECC--CSSCEEEEEECTTSCCEEEEBTTTBCCTTSCTTEEEEEETTEEEEEEESCCGGGCEEEEEEEEETT
T ss_pred CCCCEEEEEEEC--CCCeEEEEEECCCCCCEEEEEEecccCCCCcCcEEEEccCCEEEEEECCCChhHCEEEEEEEecCC
Confidence 489999999998 7789999984 22110 0 112469999999999999999999876
Q ss_pred C--CceeEeeEEEeee-cCCCeeeecCCccccCCCCcEEEEeEEccCC--CCeEEEEECCEEccc
Q psy12725 58 E--SAQASGELKLGGR-FDPPVIKESFSDETLNPGPNYYFKCIASGNP--TPEISWYLDGKKLVN 117 (119)
Q Consensus 58 ~--~~~~~~~~~v~~~-~~~~~~~~~~~~~~~~~g~~~~l~C~~~~~p--~~~~~W~~~~~~~~~ 117 (119)
+ .......+.+... ..+|.+...+.......|+.+.|.|.+.+.+ .+.+.|+++|..+..
T Consensus 92 ~~~~~~~~~~l~V~~~~~~~P~v~~~~~~~~~~~g~~v~l~C~~~g~~p~~~~v~W~k~g~~l~~ 156 (211)
T 3tv3_L 92 WDVIFGGGTKLTVLGQPKAAPSVTLFPPSSEELQANKATLVCLISDFYPGAVTVAWKADSSPVKA 156 (211)
T ss_dssp TEEEECCCEEEEECCSCCBCCEEEEECCCHHHHHTTCEEEEEEEEEEBSSCCEEEEEETTEEECT
T ss_pred CceeECCCceEEEeCCCCcCCeeEecCCchhhhcCCCeEEEEEeeeecCCCeEEEEEECCeecCC
Confidence 5 2333344554321 1366666655444445799999999998753 468999999998753
No 82
>3ry4_A Low affinity immunoglobulin gamma FC region recep; FC receptor, CD32, immunoglobulin superfamily, low responder polymorphism, cell membrane; HET: NAG; 1.50A {Homo sapiens} PDB: 1fcg_A 3ry5_A 1h9v_A 3d5o_F* 3ry6_C* 2fcb_A
Probab=99.80 E-value=4e-18 Score=92.71 Aligned_cols=109 Identities=17% Similarity=0.327 Sum_probs=80.8
Q ss_pred CCccEEEEEEeccCC-CCeeEEeeCCccCCCCCCCeEEEecCCCCCCeEEEEEEEcCCCCceeEeeEEEeeecCCCeeee
Q psy12725 1 MLALKFFTCKYEGNP-VKTISWMKDGKPVPDHNEPVFRIDSVRKEDKGMYQCVIRNEQESAQASGELKLGGRFDPPVIKE 79 (119)
Q Consensus 1 ~g~~~~l~c~~~~~~-~~~v~w~~~~~~~~~~~~~~l~~~~~~~~d~g~y~C~~~~~~~~~~~~~~~~v~~~~~~~~~~~ 79 (119)
.|+.+.|.|.+.+.+ .+.+.|++++..+... ...+.+.+++..|.|.|.|.+.+.... ....+.+. .++.+..
T Consensus 18 ~G~~v~l~C~~~~~p~~~~~~W~~~g~~~~~~-~~~~~~~~~~~~d~G~Y~C~~~~~~~s--~~~~l~v~---~~~~~~~ 91 (170)
T 3ry4_A 18 QEDSVTLTCQGARSPESDSIQWFHNGNLIPTH-TQPSYRFKANNNDSGEYTCQTGQTSLS--DPVHLTVL---FEWLVLQ 91 (170)
T ss_dssp TTCEEEEEEESCCCSSSSCEEEEETTEECTTC-CSSEEEEECCGGGCEEEEEEETTSBCC--CCEEEEEE---CCSEEEE
T ss_pred CCCcEEEEEEecCCCCcceEEEEECCeEcccC-ccceEEEecccccCeEEEEEEeCCCce--EeEEEEEE---CCceEec
Confidence 489999999998876 6789999999987643 456777889999999999999875322 23333332 2333333
Q ss_pred cCCccccCCCCcEEEEeEEc-cCCCCeEEEEECCEEcc
Q psy12725 80 SFSDETLNPGPNYYFKCIAS-GNPTPEISWYLDGKKLV 116 (119)
Q Consensus 80 ~~~~~~~~~g~~~~l~C~~~-~~p~~~~~W~~~~~~~~ 116 (119)
.....+.+|+.+.|.|.+. +.|.+.+.|+++|..+.
T Consensus 92 -~~~~~~~~g~~~~l~C~~~~~~p~~~~~W~~~g~~~~ 128 (170)
T 3ry4_A 92 -TPHLEFQEGETIMLRCHSWKDKPLVKVTFFQNGKSQK 128 (170)
T ss_dssp -CSCSEECTTCCEEEEEEEGGGCCEEEEEEEETTEEEE
T ss_pred -CCCceeecCCeEEEEEECCCCCCCceEEEEECCeEcc
Confidence 3344577899999999994 45667999999998764
No 83
>1q0x_L FAB 9B1, light chain; anti-morphine antibody, FAB fragment, immune system; HET: PG4; 1.60A {Mus musculus} SCOP: b.1.1.1 b.1.1.2 PDB: 1q0y_L* 1ngp_L* 1ngq_L 3ks0_L* 1gig_L 2vir_A 2vis_A* 2vit_A 1sm3_L 4a6y_L 1ind_L* 1ine_L* 1yuh_L* 2zpk_L 3rhw_K* 3ri5_K* 3ria_K* 3rif_K* 1mfe_L* 1mfb_L* ...
Probab=99.80 E-value=5.1e-19 Score=99.35 Aligned_cols=117 Identities=14% Similarity=0.293 Sum_probs=80.1
Q ss_pred CCccEEEEEEeccCC---CCeeEEeeCC--ccC--------------CC-------CCCCeEEEecCCCCCCeEEEEEEE
Q psy12725 1 MLALKFFTCKYEGNP---VKTISWMKDG--KPV--------------PD-------HNEPVFRIDSVRKEDKGMYQCVIR 54 (119)
Q Consensus 1 ~g~~~~l~c~~~~~~---~~~v~w~~~~--~~~--------------~~-------~~~~~l~~~~~~~~d~g~y~C~~~ 54 (119)
.|+.|.|.|.+.+.+ .+.+.|+|++ ..+ .. .....|.|.+++.+|+|.|.|.+.
T Consensus 14 ~G~~v~L~C~~~~~~~~~~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~D~G~Y~C~~~ 93 (212)
T 1q0x_L 14 PGETVTLTCRSSTGAVTTSNYANWVQEKPDHLFTGLIGGTNNRAPGVPARFSGSLIGDKAALTITGAQTEDEAIYFCALW 93 (212)
T ss_dssp TTCCEEEEEEESSSCCCGGGCCEEEEEETTTEEEEEEETTTEECTTCCTTEEEEEETTEEEEEESSCCGGGCEEEEEEEE
T ss_pred CCCCEEEEEEecccccCCCCeEEEEEeCCCCCceEEEEcCcccCCcccccEEEEeeCCEEEEEECCCCccCCEEEEEEEe
Confidence 489999999998876 4789999853 211 00 112379999999999999999999
Q ss_pred cCCCCc-eeEeeEEEeee-cCCCeeeecCCccccCCCCcEEEEeEEccCC-CC-eEEEEECCEEccc
Q psy12725 55 NEQESA-QASGELKLGGR-FDPPVIKESFSDETLNPGPNYYFKCIASGNP-TP-EISWYLDGKKLVN 117 (119)
Q Consensus 55 ~~~~~~-~~~~~~~v~~~-~~~~~~~~~~~~~~~~~g~~~~l~C~~~~~p-~~-~~~W~~~~~~~~~ 117 (119)
+..+.. .....+.+... ..+|.+...+.......|+.+.|.|.+.+.+ ++ .+.|+++|..+..
T Consensus 94 ~~~~~~~~~~~~l~V~~~~~~~P~v~~~~~~~~~~~g~~v~L~C~~~g~~p~~~~v~W~k~g~~l~~ 160 (212)
T 1q0x_L 94 SNNKLVFGGGTKLTVLGQPKSSPTVTLFPPSSEELSTAKATLVCTITDFYPGVVTVDWKVDGTPVTA 160 (212)
T ss_dssp CSSCEEECCCEEEEECCSCCBCCEEEEECCCHHHHTTTEEEEEEEEEEEBSSCCEEEEEETTEEECT
T ss_pred cCchhhcCCCeEEEEecCCCCCCeeEEeCCCHHHccCCcEEEEEEEEEEeCCCeEEEEEECCEeCCC
Confidence 875321 12233444221 1356666544433345688999999998754 33 8999999988753
No 84
>1b6u_A KIR2DL3, P58 killer cell inhibitory receptor; natural killer cell, HLA, major histocompatibility complex class I (MHC class I); 3.00A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4
Probab=99.80 E-value=3.3e-18 Score=98.92 Aligned_cols=113 Identities=12% Similarity=0.217 Sum_probs=81.5
Q ss_pred CCccEEEEEEeccCCCCeeEEeeCCccCC----------CCCCCeEEEecCCCCCCeEEEEEEEcCCC-----CceeEee
Q psy12725 1 MLALKFFTCKYEGNPVKTISWMKDGKPVP----------DHNEPVFRIDSVRKEDKGMYQCVIRNEQE-----SAQASGE 65 (119)
Q Consensus 1 ~g~~~~l~c~~~~~~~~~v~w~~~~~~~~----------~~~~~~l~~~~~~~~d~g~y~C~~~~~~~-----~~~~~~~ 65 (119)
.|+.|+|.|.+.+ +.+.+.|||++..+. ......|.|.+++.+|.|.|.|.+.+... .......
T Consensus 20 ~G~~VtL~C~~~~-~~~~~~W~k~g~~~~~~~~~~~~~~~~~~~~L~I~~v~~~DsG~Y~C~a~~~~~~~~~s~~S~~~~ 98 (257)
T 1b6u_A 20 SEETVILQCWSDV-RFQHFLLHREGKFKDTLHLIGEHHDGVSKANFSIGPMMQDLAGTYRCYGSVTHSPYQLSAPSDPLD 98 (257)
T ss_dssp SSCCEEEEEEESS-CCSEEEEEEESTTCEEEEEECBCCTTCEEEEEEECSCCTTTCEEEEEEEECSSCTTSCCCCCCCEE
T ss_pred CCCCEEEEEecCC-CCcEEEEEECCCCCCcceeeeeccCCCceEEEEeecCCcccCEEEEEeEeccCCCccccccCCCEE
Confidence 3899999999975 567899999987542 11346799999999999999999986422 1122334
Q ss_pred EEEeeecCCCeeeecCCccccCCCCcEEEEeEEccCCCCeEEEEECCEEcc
Q psy12725 66 LKLGGRFDPPVIKESFSDETLNPGPNYYFKCIASGNPTPEISWYLDGKKLV 116 (119)
Q Consensus 66 ~~v~~~~~~~~~~~~~~~~~~~~g~~~~l~C~~~~~p~~~~~W~~~~~~~~ 116 (119)
+.|.....+|.+...+. ..+.+|+.++|.|.+.+. .+.+.|+|+|..+.
T Consensus 99 L~V~~~~~~P~l~~~p~-~~V~~G~~vtL~C~~~~~-~~~~~w~k~g~~~~ 147 (257)
T 1b6u_A 99 IVITGLYEKPSLSAQPG-PTVLAGESVTLSCSSRSS-YDMYHLSREGEAHE 147 (257)
T ss_dssp EEEECSSCCCEEECSSC-TTCBTTCEEEEEEECSSC-CSEEEEEETTSSCE
T ss_pred EecccCCCCcceEccCC-CccCCCCEEEEEEeCCCC-CcEEEEEECCcccC
Confidence 44443334566665543 467899999999998765 46899999987553
No 85
>1ry7_B FGFR-3, fibroblast growth factor receptor 3; FGF-FGFR complex, beta trefoil, IG domain, growth factor/growth factor receptor complex; 3.20A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4
Probab=99.80 E-value=3.1e-19 Score=106.09 Aligned_cols=114 Identities=27% Similarity=0.537 Sum_probs=86.3
Q ss_pred CccEEEEEEeccCCCCeeEEeeCCccCCCC----------CCCeEEEecCCCCCCeEEEEEEEcCCCCceeEeeEEEeee
Q psy12725 2 LALKFFTCKYEGNPVKTISWMKDGKPVPDH----------NEPVFRIDSVRKEDKGMYQCVIRNEQESAQASGELKLGGR 71 (119)
Q Consensus 2 g~~~~l~c~~~~~~~~~v~w~~~~~~~~~~----------~~~~l~~~~~~~~d~g~y~C~~~~~~~~~~~~~~~~v~~~ 71 (119)
|+.+.|.|.+.+.|.+.+.|++++..+... ....|.|.+++..|.|.|.|.+.+..+.......+.+...
T Consensus 138 g~~v~l~C~~~g~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~n~~g~~~~~~~l~V~~~ 217 (334)
T 1ry7_B 138 ANTVRFRCPAAGNPTPSISWLKNGREFRGEHRIGGIKLRHQQWSLVMESVVPSDRGNYTCVVENKFGSIRQTYTLDVLER 217 (334)
T ss_dssp TCCEEEECCCCCSSCCEEECCBTTBCCCTTSSTTCCCCCTTTTEEEECSCCGGGCCCEEEEEEETTEEEEEEEEEEEECC
T ss_pred CCcEEEEEEccCCCCCeEEEEECCEECcccccccceecccceEEEEECCCCcccCEEEEEEEEeCCCCEEEEEEEEEecC
Confidence 789999999999898999999998766432 2358999999999999999999998765544555555431
Q ss_pred c-CCCeeee-cCCccccCCCCcEEEEeEEccCCCCeEEEEE----CCEEc
Q psy12725 72 F-DPPVIKE-SFSDETLNPGPNYYFKCIASGNPTPEISWYL----DGKKL 115 (119)
Q Consensus 72 ~-~~~~~~~-~~~~~~~~~g~~~~l~C~~~~~p~~~~~W~~----~~~~~ 115 (119)
. .+|.+.. .+....+..|+.+.|.|.+.+.|.+.+.|++ +|..+
T Consensus 218 ~~~~p~~~~~~~~~~~~~~G~~v~l~C~~~g~p~p~v~W~~~~~~~g~~~ 267 (334)
T 1ry7_B 218 SPHRPILQAGLPANQTAVLGSDVEFHCKVYSDAQPHIQWLKHVEVNGSKV 267 (334)
T ss_dssp CCSSCBCCTTCSCCEEEESSCCEEECCCCBCSSCEEEEEEECCCGGGCSB
T ss_pred CCCCCceEecCCCceEEeCCCCEEEEEEEecCCCCeEEEEECCcCCCccc
Confidence 1 1233332 2344567789999999999999999999999 55544
No 86
>2xzc_L FAB A.17 light chain; immune system; HET: XOP; 1.36A {Homo sapiens} PDB: 2xza_L* 3kdm_L* 3nps_C 1dn0_A 1qlr_A* 2v7n_A 3eo0_A 3eo1_A 2agj_L* 2fx7_L 1tzg_L 2fx8_L 2fx9_L* 1u6a_L 3hi1_L* 3kym_A 3kyk_L 3qwo_L* 3ixt_L* 3qeg_L ...
Probab=99.80 E-value=1.3e-18 Score=97.98 Aligned_cols=117 Identities=12% Similarity=0.184 Sum_probs=78.3
Q ss_pred CCccEEEEEEe-ccCC-CCeeEEeeCCc--cCC----------C-----------CCCCeEEEecCCCCCCeEEEEEEEc
Q psy12725 1 MLALKFFTCKY-EGNP-VKTISWMKDGK--PVP----------D-----------HNEPVFRIDSVRKEDKGMYQCVIRN 55 (119)
Q Consensus 1 ~g~~~~l~c~~-~~~~-~~~v~w~~~~~--~~~----------~-----------~~~~~l~~~~~~~~d~g~y~C~~~~ 55 (119)
.|+.|+|.|.+ .+.+ .+.+.|+|++. .+. . .....|.|.+++.+|+|.|.|.+.+
T Consensus 14 ~G~~v~L~C~v~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~D~G~Y~C~~~~ 93 (216)
T 2xzc_L 14 PGQKVTISCSGSSSNIGNNYVSWYQQLPGTAPKLLIYDNNKRPSGIPDRFSGSKSGTSATLGITGLQTGDEADYYCGTWD 93 (216)
T ss_dssp TTCCEEEEEECCTTTGGGSCCEEEEECTTSCCEEEEBTTTBCCTTCCTTEEEEEETTEEEEEECSCCGGGCEEEEEEEEC
T ss_pred CCCeEEEEEEeecCCCCCCeEEEEEeCCCCCcEEEEEecCccCCCCCCceEEeccCCEEEEEECCCCcccCEEEEEEEEe
Confidence 48999999995 4332 57899998542 110 0 0123699999999999999999998
Q ss_pred CCCC--ceeEeeEEEeeecCCCeeeecCCccccCCCCcEEEEeEEccC-CCC-eEEEEECCEEccc
Q psy12725 56 EQES--AQASGELKLGGRFDPPVIKESFSDETLNPGPNYYFKCIASGN-PTP-EISWYLDGKKLVN 117 (119)
Q Consensus 56 ~~~~--~~~~~~~~v~~~~~~~~~~~~~~~~~~~~g~~~~l~C~~~~~-p~~-~~~W~~~~~~~~~ 117 (119)
..+. ......+.+.....+|.+...+.......|+.+.|.|.+.+. |.+ .+.|+++|..+..
T Consensus 94 ~~~~~~~~~~~~l~V~~~~~~P~v~~~~~~~~~~~g~~v~L~C~~~g~~P~~~~v~W~k~g~~~~~ 159 (216)
T 2xzc_L 94 SSLNPVFGGGTKLEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSG 159 (216)
T ss_dssp TTSCEEEBCCEEEEECCCCBCCEEEEECCCHHHHHTTEEEEEEEEEEEBSSCCEEEEEETTEECCS
T ss_pred CCCcceECCCEEEEEcCCCCCCceEEeCCChhhccCCcEEEEEEEEeEcCCceEEEEEECCeecCC
Confidence 7641 122334444322235666554333223358899999999874 554 8999999998754
No 87
>3rjd_A High affinity immunoglobulin gamma FC receptor I; immune system; HET: NAG MAN FUC P33; 2.65A {Homo sapiens}
Probab=99.79 E-value=5.6e-18 Score=97.55 Aligned_cols=109 Identities=19% Similarity=0.340 Sum_probs=84.0
Q ss_pred CCccEEEEEEeccCCCC-eeEEeeCCccCCCCCCCeEEEecCCCCCCeEEEEEEEcCCCCceeEeeEEEeeecCCCeeee
Q psy12725 1 MLALKFFTCKYEGNPVK-TISWMKDGKPVPDHNEPVFRIDSVRKEDKGMYQCVIRNEQESAQASGELKLGGRFDPPVIKE 79 (119)
Q Consensus 1 ~g~~~~l~c~~~~~~~~-~v~w~~~~~~~~~~~~~~l~~~~~~~~d~g~y~C~~~~~~~~~~~~~~~~v~~~~~~~~~~~ 79 (119)
.|+.+.|.|.+.+.+.+ .+.|++++..+.. ....|.|.+++..|.|.|.|.+.+..... ...+.+. .++ +..
T Consensus 15 ~G~~v~l~C~~~~~~~~~~~~W~~~g~~~~~-~~~~l~i~~~~~~d~G~Y~C~~~~~~~s~--~~~l~v~---~~~-~~~ 87 (262)
T 3rjd_A 15 QEETVTLHCEVLHLPGSSSTQWFLNGTATQT-STPSYRITSASVNDSGEYRCQRGLSGRSD--PIQLEIH---RGW-LLL 87 (262)
T ss_dssp TTCCEEEEEECSSCCCTTCEEEEETTEECSC-CSSEEEESSCCGGGCEEEEEEESSSCCCC--CEEEEEE---CSS-EEE
T ss_pred CCCeEEEEEECCCCCCCceEEEEECCEEeec-cCCeEEEecCCcccCeEEEEEEecCCccc--cEEEEEe---ccc-eEe
Confidence 48999999999888877 9999999988754 46789999999999999999998754322 2333332 233 233
Q ss_pred cCCccccCCCCcEEEEeEE-ccCCCCeEEEEECCEEcc
Q psy12725 80 SFSDETLNPGPNYYFKCIA-SGNPTPEISWYLDGKKLV 116 (119)
Q Consensus 80 ~~~~~~~~~g~~~~l~C~~-~~~p~~~~~W~~~~~~~~ 116 (119)
.+....+.+|+.+.|.|.+ .+.|.+.+.|++++..+.
T Consensus 88 ~~~~~~~~~g~~v~l~C~~~~~~p~~~v~W~~~g~~~~ 125 (262)
T 3rjd_A 88 QVSSRVFTEGEPLALRCHAWKDKLVYNVLYYRNGKAFK 125 (262)
T ss_dssp EESCSEEETTSCEEEEEEEGGGCCCEEEEEEETTEEEE
T ss_pred cCCCeEEecCCeEEEEEEccCCCCCceEEEEECCcccc
Confidence 3344457789999999999 667778999999998765
No 88
>3o4o_C Interleukin-1 receptor type 2; cytokine-receptor complex, beta-trefoil, IG-like fold, immun; HET: NAG; 3.30A {Homo sapiens}
Probab=99.79 E-value=5.3e-19 Score=105.31 Aligned_cols=116 Identities=22% Similarity=0.401 Sum_probs=88.2
Q ss_pred CCccEEEEEE-----eccCCCCeeEEeeCCccCCCC--------CCCeEEEecCCCCCCeEEEEEEEcCCCCc----eeE
Q psy12725 1 MLALKFFTCK-----YEGNPVKTISWMKDGKPVPDH--------NEPVFRIDSVRKEDKGMYQCVIRNEQESA----QAS 63 (119)
Q Consensus 1 ~g~~~~l~c~-----~~~~~~~~v~w~~~~~~~~~~--------~~~~l~~~~~~~~d~g~y~C~~~~~~~~~----~~~ 63 (119)
.|+.+.|.|. ..+.|.+.+.|++++..+... ....|.|..++..|.|.|+|.+.+..+.. ...
T Consensus 134 ~g~~v~l~C~~~~~~~~g~p~~~v~W~k~g~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~n~~g~~~~~~~~~ 213 (339)
T 3o4o_C 134 LSTSGVLVCPDLSEFTRDKTDVKIQWYKDSLLLDKDNEKFLSVRGTTHLLVHDVALEDAGYYRCVLTFAHEGQQYNITRS 213 (339)
T ss_dssp TTSCEEEECCSCTTTCCSSSCCCBCCEESSCBCCTTCSSEEECTTSSEEEESSCCGGGCEEEEEEEECCBTTBCCEEEEE
T ss_pred CCCCEEEEecCCcccccCCCCceEEEecCCeeCCCCCceeEEcCCcceEEEcccCHhhCeEEEEEEEECCCCeEEEEEEE
Confidence 4889999999 777888999999999877543 22579999999999999999999876532 223
Q ss_pred eeEEEeeec--CCCeeeecCCccccCCCCcEEEEeEE---ccCC-CCeEEEEECCEEcc
Q psy12725 64 GELKLGGRF--DPPVIKESFSDETLNPGPNYYFKCIA---SGNP-TPEISWYLDGKKLV 116 (119)
Q Consensus 64 ~~~~v~~~~--~~~~~~~~~~~~~~~~g~~~~l~C~~---~~~p-~~~~~W~~~~~~~~ 116 (119)
..+.+.... .+|.+...+....+..|+.+.|.|.+ .+.| .+.+.|++++..+.
T Consensus 214 ~~l~V~~~~~~~~P~i~~~~~~~~v~~G~~v~L~C~~~~~~g~P~~~~v~W~~~g~~~~ 272 (339)
T 3o4o_C 214 IELRIKKKKEETIPVIISPLKTISASLGSRLTIPCKVFLGTGTPLTTMLWWTANDTHIE 272 (339)
T ss_dssp EEEEEECCCCCCCCEECCCSCCCCCCCCSCCCCCCCEEESSSCCSSCEEEEESSSSCSS
T ss_pred EEEEEEcCCCCCCCEEecCCceeEeccCCCEEEEEEEECCCCCCCCceEEEEECCeecc
Confidence 344443211 24566655555578899999999999 8888 77999999987653
No 89
>3b5h_A Cervical EMMPRIN, HAB18G/CD147; IG-like domain, cell invasion; 2.80A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4
Probab=99.79 E-value=6.1e-18 Score=93.05 Aligned_cols=102 Identities=24% Similarity=0.545 Sum_probs=76.8
Q ss_pred CCccEEEEEEeccCCCC--eeEEeeCCccCCCCC----CCeEEEecCCCCCCeEEEEEEEcCCCCceeEeeEEEeeecCC
Q psy12725 1 MLALKFFTCKYEGNPVK--TISWMKDGKPVPDHN----EPVFRIDSVRKEDKGMYQCVIRNEQESAQASGELKLGGRFDP 74 (119)
Q Consensus 1 ~g~~~~l~c~~~~~~~~--~v~w~~~~~~~~~~~----~~~l~~~~~~~~d~g~y~C~~~~~~~~~~~~~~~~v~~~~~~ 74 (119)
.|+.+.|.|.+.+.+.+ .+.|++++..+.... ...+.+. +..|.|.|.|.+.+.. .....+.+. .+
T Consensus 12 ~G~~v~l~C~~~~~~~p~~~~~W~k~~~~l~~~~~~~~~~~l~i~--~~~d~G~Y~C~~~n~~---~~~~~l~V~---~~ 83 (184)
T 3b5h_A 12 LGSKILLTCSLNDSATEVTGHRWLKGGVVLKEDALPGQKTEFKVD--SDDQWGEYSCVFLPEP---MGTANIQLH---GP 83 (184)
T ss_dssp ETTEEEEEEEEESCSSCCCEEEEESSSEEEECTTCCCSEEEEEEC--GGGCCEEEEEEEESTT---SCEEEEEEC---CS
T ss_pred cCCCEEEEEECCCCCCCceEEEEEeCCEEeecccccCCcEEEEEe--chhhCeEEEEEEECCc---CcEEEEEEe---cC
Confidence 38999999999877666 899999998765432 1234443 6889999999999832 233444443 46
Q ss_pred CeeeecCCccccCCCCcEEEEeEEccCC-CCeEEEEE
Q psy12725 75 PVIKESFSDETLNPGPNYYFKCIASGNP-TPEISWYL 110 (119)
Q Consensus 75 ~~~~~~~~~~~~~~g~~~~l~C~~~~~p-~~~~~W~~ 110 (119)
|.+...+....+..|+.+.|.|.+.+.| .+.+.|++
T Consensus 84 P~~~~~~~~~~~~~g~~~~l~C~~~g~p~~~~i~W~~ 120 (184)
T 3b5h_A 84 PRVKAVKSSEHINEGETAMLVCKSESVPPVTDWAWYK 120 (184)
T ss_dssp CCCEESCSEEEECTTSCEEEEEECCCSSCCCEEEEEE
T ss_pred CceeecCCCcEEcCCCcEEEEEEECCCCCCCeEEEEE
Confidence 6666666555688999999999999998 78999999
No 90
>4frw_A Poliovirus receptor-related protein 4; immunoglobulin-like domain, IG domain, viral entry receptor, adhesion; 3.50A {Homo sapiens}
Probab=99.79 E-value=5.8e-18 Score=94.82 Aligned_cols=115 Identities=16% Similarity=0.268 Sum_probs=80.0
Q ss_pred CCccEEEEEEeccCCCC---eeEEeeCCccCCC------------------------------CCCCeEEEecCCCCCCe
Q psy12725 1 MLALKFFTCKYEGNPVK---TISWMKDGKPVPD------------------------------HNEPVFRIDSVRKEDKG 47 (119)
Q Consensus 1 ~g~~~~l~c~~~~~~~~---~v~w~~~~~~~~~------------------------------~~~~~l~~~~~~~~d~g 47 (119)
+|+.+.|.|.+.+.+.+ .|.|+|++..... ....+|.|.+++.+|+|
T Consensus 13 ~G~~v~L~C~v~~~~~~~~~~V~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~sL~I~~v~~~D~G 92 (218)
T 4frw_A 13 LGQDAKLPCFYRGDSGEQVGQVAWARVDAGEGAQELALLHSKYGLHVSPAYEGRVEQPPPPRNPLDGSVLLRNAVQADEG 92 (218)
T ss_dssp TTSCEEECCEECCCTTCEEEEEEEEEECSSSCEEEEEEEETTTEEEECGGGTTTEECCSSCCCTTBCCEEESSCCGGGCE
T ss_pred cCCCEEEEEEEEcCCCCCccEEEEEECCCCCCceeEEEecCCCCeEeCccccceEEEecccccCCeEEEEEeeccHHHCC
Confidence 49999999999887654 4899997643311 12356999999999999
Q ss_pred EEEEEEEcCCCCceeEeeEEEeeecCCCeeeecCCccccCCCCcEEEEeEEccCCCCeEEEEECCEEcc
Q psy12725 48 MYQCVIRNEQESAQASGELKLGGRFDPPVIKESFSDETLNPGPNYYFKCIASGNPTPEISWYLDGKKLV 116 (119)
Q Consensus 48 ~y~C~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~g~~~~l~C~~~~~p~~~~~W~~~~~~~~ 116 (119)
.|.|.+.+..+....... .+.....++..........+..+..+.+.|.+.+.|.|.+.|++++..+.
T Consensus 93 ~Y~C~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~~~g~p~p~i~W~~~~~~~~ 160 (218)
T 4frw_A 93 EYECRVSTFPAGSFQARL-RLRVLVPPLPSLNPGPALEEGQGLTLAASCTAEGSPAPSVTWDTEVKGTT 160 (218)
T ss_dssp EEEEEEEEETTEEEEEEE-EEEEEBCCCCEEEECSCEETTCCSEEEEEEEEEEBSCCEEEEEESSCCEE
T ss_pred ceeEEEEeccCceeeeEE-EEEEeeeccceeeeeeeeeeeeccccceeeeccCCcCceEEEEECCcccc
Confidence 999998875433222221 22221223333333444456788999999999999999999999887554
No 91
>3jz7_A MCAR, CAR, coxsackievirus and adenovirus receptor homolog; cell adhesion molecule, immunoglobuline superfamily, alternative splicing, cell adhesion; 2.19A {Mus musculus} PDB: 3mj7_B* 2npl_X
Probab=99.78 E-value=2.6e-18 Score=96.18 Aligned_cols=108 Identities=19% Similarity=0.380 Sum_probs=79.3
Q ss_pred CCccEEEEEEeccCC----CCeeEEeeC----------------CccCCC-----------------CCCCeEEEecCCC
Q psy12725 1 MLALKFFTCKYEGNP----VKTISWMKD----------------GKPVPD-----------------HNEPVFRIDSVRK 43 (119)
Q Consensus 1 ~g~~~~l~c~~~~~~----~~~v~w~~~----------------~~~~~~-----------------~~~~~l~~~~~~~ 43 (119)
.|+.+.|.|.+.+.+ .+.+.|+++ +..... .....|.|.+++.
T Consensus 14 ~G~~v~L~C~~~~~~~~~~~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~L~i~~v~~ 93 (214)
T 3jz7_A 14 KGETAYLPCKFTLSPEDQGPLDIEWLISPSDNQIVDQVIILYSGDKIYDNYYPDLKGRVHFTSNDVKSGDASINVTNLQL 93 (214)
T ss_dssp TTSCEEECCBCCCCTTCCSCCEEEEEEEESSSSCCSEEEEEEETTEEECCCCGGGTTTEEESCSCGGGTBCCEEECSCCG
T ss_pred cCCCEEEEEEEecCCCCCCcEEEEEEecCCCCCCCceEEEEEeCCeEccccCCccccceEEeccCccCCcccEEEccCCh
Confidence 489999999998766 468999883 322210 0246799999999
Q ss_pred CCCeEEEEEEEcCCCCceeEeeEEEeeecCCCeeeecCCccccCCCCcEEEEeEE-ccCCCCeEEEEEC
Q psy12725 44 EDKGMYQCVIRNEQESAQASGELKLGGRFDPPVIKESFSDETLNPGPNYYFKCIA-SGNPTPEISWYLD 111 (119)
Q Consensus 44 ~d~g~y~C~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~g~~~~l~C~~-~~~p~~~~~W~~~ 111 (119)
+|.|.|.|.+.+..+.......+.+. .+|.+...+....+..|+.+.|.|.+ .+.|.+.+.|+++
T Consensus 94 ~D~G~Y~C~~~~~~~~~~~~~~l~V~---~~p~~~~~~~~~~~~~g~~v~l~C~~~~g~p~~~v~W~~~ 159 (214)
T 3jz7_A 94 SDIGTYQCKVKKAPGVANKKFLLTVL---VKPSGTRCFVDGSEEIGNDFKLKCEPKEGSLPLQFEWQKL 159 (214)
T ss_dssp GGCEEEEEEEEETTEEEEEEEEEEEE---CCCBSCEEEEESCCBTTCCEEEEEECSBCCSSCEEEEEEC
T ss_pred hhCeEEEEEEEeCCCccccEEEEEEE---cCCCCceeeeecceecCCcEEEEecCCCCCCCCEEEEEEC
Confidence 99999999999876544444555553 34444433334457889999999999 7889999999994
No 92
>2wim_A N-CAM 2, NCAM2, neural cell adhesion molecule 2; cell membrane, transmembrane, immunoglobulin; HET: NDG NAG; 3.00A {Homo sapiens}
Probab=99.78 E-value=3.8e-18 Score=99.63 Aligned_cols=113 Identities=24% Similarity=0.523 Sum_probs=82.7
Q ss_pred CCccEEEEEEeccCCCCeeEEee-CCccCCCCC---------CCeEEEecCCCCCCeEEEEEEEcCCCCceeEeeEEEee
Q psy12725 1 MLALKFFTCKYEGNPVKTISWMK-DGKPVPDHN---------EPVFRIDSVRKEDKGMYQCVIRNEQESAQASGELKLGG 70 (119)
Q Consensus 1 ~g~~~~l~c~~~~~~~~~v~w~~-~~~~~~~~~---------~~~l~~~~~~~~d~g~y~C~~~~~~~~~~~~~~~~v~~ 70 (119)
.|+.+.|.|.+.+.|. .+.|++ ++..+.... ...|.|.+++..|.|.|.|.+.+..+... ...+.+.+
T Consensus 18 ~G~~v~l~C~~~~~p~-~v~W~~~~g~~~~~~~~~~~~~~~~~~~L~i~~~~~~D~G~Y~C~~~n~~g~~~-~~~~~l~v 95 (291)
T 2wim_A 18 VGESKFFTCTAIGEPE-SIDWYNPQGEKIISTQRVVVQKEGVRSRLTIYNANIEDAGIYRCQATDAKGQTQ-EATVVLEI 95 (291)
T ss_dssp TTCCEEEEEEEESCCS-EEECBCTTCCBCCCBTTEEEEEETTEEEEEECSCCGGGCEEEEEEEECSSSCEE-EEEEEEEE
T ss_pred CCCcEEEEEEEeCCCC-ceEEECCCCcCccCCCcEEEecCCCEEEEEEccCCcccCEEEEEEEecccCceE-EEEEEEEe
Confidence 4899999999998764 899999 666554321 24799999999999999999999765432 23333333
Q ss_pred ecCCCeeeecCCccccCCCCcEEEEeEEccCCCCeEEEEECCEEcc
Q psy12725 71 RFDPPVIKESFSDETLNPGPNYYFKCIASGNPTPEISWYLDGKKLV 116 (119)
Q Consensus 71 ~~~~~~~~~~~~~~~~~~g~~~~l~C~~~~~p~~~~~W~~~~~~~~ 116 (119)
..+|.+...+....+.+|+.+.|.|.+.+.|.+.+.|++++..+.
T Consensus 96 -~~~~~~~~~~~~~~v~~G~~v~l~C~~~~~p~~~v~W~~~~~~~~ 140 (291)
T 2wim_A 96 -YQKLTFREVVSPQEFKQGEDAEVVCRVSSSPAPAVSWLYHNEEVT 140 (291)
T ss_dssp -ECCCBCCSCCCSEEEETTSCEEECCCCBCSSCCEEEEECC----C
T ss_pred -cCCcceEeCCCChhhcCCCCEEEEEEEccCCCCEEEEEECCcccc
Confidence 245555555555567899999999999999999999999987664
No 93
>1c1e_H Catalytic antibody 1E9 (heavy chain); diels-alder, immunoglobulin, immune system; HET: ENH; 1.90A {Mus musculus} SCOP: b.1.1.1 b.1.1.2 PDB: 1dbb_H* 1dba_H* 1dbj_H* 1dbk_H* 1dbm_H* 2dbl_H* 3ojd_B 1jgl_H* 1jhk_H 1ghf_H 1tet_H* 3e8u_H 1fj1_B 1cl7_H
Probab=99.78 E-value=1.2e-18 Score=98.24 Aligned_cols=115 Identities=17% Similarity=0.339 Sum_probs=80.7
Q ss_pred CCccEEEEEEeccCC--CCeeEEeeCC--ccCC-------------------C---------CCCCeEEEecCCCCCCeE
Q psy12725 1 MLALKFFTCKYEGNP--VKTISWMKDG--KPVP-------------------D---------HNEPVFRIDSVRKEDKGM 48 (119)
Q Consensus 1 ~g~~~~l~c~~~~~~--~~~v~w~~~~--~~~~-------------------~---------~~~~~l~~~~~~~~d~g~ 48 (119)
.|+.+.|.|.+.+.+ .+.+.|+|+. ..+. . .....|.|.+++.+|+|.
T Consensus 14 ~G~~v~L~C~~~~~~~~~~~v~W~k~~~g~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~~L~I~~v~~~D~G~ 93 (219)
T 1c1e_H 14 PGETVKISCKASGYMFTNYGMNWVKQAPGKALKLMGWINPYTGESTFADDFKGRFAFFLETSATTAYLQINNLKNEDMAT 93 (219)
T ss_dssp TTCCEEEEEEEESSCGGGSEEEEEEECTTSCEEEEEEECSSSCCEEECGGGCSSEEEEEEGGGTEEEEEECSCCGGGCEE
T ss_pred CCCcEEEEEEEeCcccccceEEEEEeCCCCCcEEEEEEecCCCceEeCcccCCcEEEEEecCCCEEEEEECCCCcccCEE
Confidence 489999999998764 6789999863 2210 0 012479999999999999
Q ss_pred EEEEEEcCCCCc----eeEeeEEEeee-cCCCeeeecCCccccCCCCcEEEEeEEcc-CCCC-eEEEEECCEEc
Q psy12725 49 YQCVIRNEQESA----QASGELKLGGR-FDPPVIKESFSDETLNPGPNYYFKCIASG-NPTP-EISWYLDGKKL 115 (119)
Q Consensus 49 y~C~~~~~~~~~----~~~~~~~v~~~-~~~~~~~~~~~~~~~~~g~~~~l~C~~~~-~p~~-~~~W~~~~~~~ 115 (119)
|.|.+.+..+.. .....+.+... ..+|.+...+....+..|+.+.|.|.+.+ .|.| .+.|+++|..+
T Consensus 94 Y~C~~~~~~~~~~~~~~~~~~l~V~~~~~~~P~i~~~~~~~~~~~g~~v~L~C~~~g~~P~p~~v~W~~~g~~~ 167 (219)
T 1c1e_H 94 YFCARGTTIVRAMDYWGQGTSLTVSSAKTTPPSVYPLAPGSAAQTNSMVTLGCLVKGYFPEPVTVTWNSGSLSS 167 (219)
T ss_dssp EEEEEEETTTTEEEEECCCEEEEECCCCCBCCEEEEECCCSSSCCSSEEEEEEEEEEEBSSCCEEEEGGGTBCT
T ss_pred EEEEEeccCcccceeecCceEEEEecCCCCCCeEEEecCccccccCCeEEEEEEcccccCCCeEEEEEeCCccc
Confidence 999999875211 12334444321 12355544443445678999999999988 7888 99999998753
No 94
>3sbw_C Programmed cell death 1 ligand 1; PD-1, PD-L1, B7-H1, programmed death-1 ligand 1, complex, costimulatory, immune system; 2.28A {Homo sapiens} PDB: 3fn3_A 3bis_A 3bik_A
Probab=99.78 E-value=1.4e-17 Score=93.98 Aligned_cols=111 Identities=17% Similarity=0.304 Sum_probs=76.2
Q ss_pred CCccEEEEEEeccCC-----CCeeEEeeCCccC---------CC------------------CCCCeEEEecCCCCCCeE
Q psy12725 1 MLALKFFTCKYEGNP-----VKTISWMKDGKPV---------PD------------------HNEPVFRIDSVRKEDKGM 48 (119)
Q Consensus 1 ~g~~~~l~c~~~~~~-----~~~v~w~~~~~~~---------~~------------------~~~~~l~~~~~~~~d~g~ 48 (119)
+|+.+.|.|.+.+.| ...+.|++++..+ .. ....+|.|.+++.+|+|.
T Consensus 15 ~G~~v~L~C~~~~~p~~~~~~~~v~W~~~~~~v~~~~~g~~~~~~~~~~~~~r~~~~~~~~~~~~~~L~I~~v~~~D~G~ 94 (222)
T 3sbw_C 15 YGSNMTIECKFPVEKQLDLAALIVYWEMEDKNIIQFVHGEEDLKVQHSSYRQRARLLKDQLSLGNAALQITDVKLQDAGV 94 (222)
T ss_dssp TTSCEEEEEECCCCSSCCTTTCEEEEEETTEEEEEEETTEECSSSSCGGGSSSEEECHHHHTTTEEEEEESSCCGGGCEE
T ss_pred cCCcEEEEeEecCCCCCCCccEEEEEEECCcEEEEEeCCccccccccccccCceEEccccccCCEEEEEEcCcccccCeE
Confidence 489999999987655 3489999964211 00 012479999999999999
Q ss_pred EEEEEEcCCCCceeEeeEEEeeecCCCeeeecCCccccCCCCcEEEEeEEccCCCCeEEEEEC-CEEc
Q psy12725 49 YQCVIRNEQESAQASGELKLGGRFDPPVIKESFSDETLNPGPNYYFKCIASGNPTPEISWYLD-GKKL 115 (119)
Q Consensus 49 y~C~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~g~~~~l~C~~~~~p~~~~~W~~~-~~~~ 115 (119)
|.|.+.+ .+.......+.|......+.... ......|+.+.|.|.+.|.|.|.+.|+++ +..+
T Consensus 95 Y~C~~~~-~~~~~~~~~l~V~~~~~~~~~~~---~~~~~~g~~v~L~C~~~g~P~p~i~W~~~~g~~~ 158 (222)
T 3sbw_C 95 YRCMISY-GGADYKRITVKVNAPYNKINQRI---LVVDPVTSEHELTCQAEGYPKAEVIWTSSDHQVL 158 (222)
T ss_dssp EEEEEES-SSEEEEEEEEEEEBCCCCCEEEE---EEEETTTTEEEEEEEEEEBSCCEEEEEETTCCEE
T ss_pred EEEEEEe-CCCceeEEEEEEECCCCCCCcee---eeeecCCCcEEEEEEecCCCCCeEEEEECCCcee
Confidence 9999998 33333444454442211221111 12456899999999999999999999998 5544
No 95
>2rgs_A I, IG gamma-2B heavy chain; FC-fragment, immunoglobulin, glycosylation, immune system; HET: NAG FUC MAN GAL; 2.13A {Mus musculus}
Probab=99.78 E-value=7e-19 Score=99.45 Aligned_cols=116 Identities=15% Similarity=0.225 Sum_probs=80.1
Q ss_pred CCccEEEEEEeccC---C-CCeeEEeeCCccCCCC--------------CCCeEEEecCCCCCCeEEEEEEEcCCCCcee
Q psy12725 1 MLALKFFTCKYEGN---P-VKTISWMKDGKPVPDH--------------NEPVFRIDSVRKEDKGMYQCVIRNEQESAQA 62 (119)
Q Consensus 1 ~g~~~~l~c~~~~~---~-~~~v~w~~~~~~~~~~--------------~~~~l~~~~~~~~d~g~y~C~~~~~~~~~~~ 62 (119)
.|+.+.|.|.+.+. + .+.|.|+|++..+... ....|.|..++..|.|.|.|.+.+..+....
T Consensus 25 ~G~~v~L~C~~~g~~~~p~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~L~I~~~~~~D~g~Y~C~~~~~~~~~~~ 104 (218)
T 2rgs_A 25 ISLTPKVTCVVVDVSEDDPDVQISWFVNNVEVHTAQTQTHREDYNSTIRVVSTLPIQHQDWMSGKEFKCKVNNKDLPSPI 104 (218)
T ss_dssp TTSCCEEEEEEEEECTTSCCEEEEEEETTEEECCCEEEEEEETTTTEEEEEEEEECCHHHHHTTCCEEEEEEETTCSSCE
T ss_pred cCCCeeEEEEEcCCccCCCceEEEEEECCccccCcccccccccCCCeEEEEEEEEEcHHHcCCCCeEEEEEECCcCCCcc
Confidence 48999999999876 3 3789999998665321 0135778888889999999999987654311
Q ss_pred EeeEEE-eeecCCCeeeecCCccccCCCCcEEEEeEEcc-CCCC-eEEEEECCEEcc
Q psy12725 63 SGELKL-GGRFDPPVIKESFSDETLNPGPNYYFKCIASG-NPTP-EISWYLDGKKLV 116 (119)
Q Consensus 63 ~~~~~v-~~~~~~~~~~~~~~~~~~~~g~~~~l~C~~~~-~p~~-~~~W~~~~~~~~ 116 (119)
...+.. .....+|.+...+.......|+.+.|.|.+.| .|.+ .+.|+++|..+.
T Consensus 105 ~~~v~~~~~~~~~P~v~~~~~~~~~~~g~~~~L~C~~~g~~P~~~~v~W~k~g~~~~ 161 (218)
T 2rgs_A 105 ERTISKIKGLVRAPQVYILPPPAEQLSRKDVSLTCLVVGFNPGDISVEWTSNGHTEE 161 (218)
T ss_dssp EEEECCCCCCCBCCEEEEECCCGGGTTSSEEEEEEEEEEEBSSCCEEEEEETTEEEC
T ss_pred eEEEeecCCCCCCCEEEEECCChHHhcCCceEEEEEEEeeeCCCcEEEEEECCEecc
Confidence 222211 01124666655444333346899999999988 4665 899999998764
No 96
>2y25_A Myomesin; structural protein, sarcomere, M-BAND, immunoglobulin-like D; 3.50A {Homo sapiens}
Probab=99.78 E-value=1.3e-18 Score=102.60 Aligned_cols=116 Identities=19% Similarity=0.307 Sum_probs=83.0
Q ss_pred CccEEEEEEecc----------CCCCeeEEeeCCccCCCCC---------CCeEEEecCCCCCCeEEEEEEEcCCCCcee
Q psy12725 2 LALKFFTCKYEG----------NPVKTISWMKDGKPVPDHN---------EPVFRIDSVRKEDKGMYQCVIRNEQESAQA 62 (119)
Q Consensus 2 g~~~~l~c~~~~----------~~~~~v~w~~~~~~~~~~~---------~~~l~~~~~~~~d~g~y~C~~~~~~~~~~~ 62 (119)
|+.+.|.|...+ .|.+.+.|++++..+.... ...|.|.+++..|.|.|.|.+.+..+....
T Consensus 113 g~~~~l~c~~~~~~l~c~~~~~~p~~~i~W~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~n~~g~~~~ 192 (317)
T 2y25_A 113 ATDLKIQSTAEGIQLYSFVTYYVEDLKVNWSHNGSAIRYSDRVKTGVTGEQIWLQINEPTPNDKGKYVMELFDGKTGHQK 192 (317)
T ss_dssp BCCCEEEECSSEEEEEEEBSSCCSSCEEEEEESSSBCCCCSSEEEEECSSEEEEEEESCCGGGCEEEEEEEECSSCEEEE
T ss_pred CCCeEEEeeccccEEEEEeccCCCCcEEEEEECCEECCCCCCeEEeccCCEEEEEECcCCcccCeeEEEEEEeCCceEEE
Confidence 556666666655 5788999999998775422 134899999999999999999997665544
Q ss_pred EeeEEEee-----------------ecCCCeeeec-CCccccCCCCcEEEEeEEccCCCCeEEEEECCEEccc
Q psy12725 63 SGELKLGG-----------------RFDPPVIKES-FSDETLNPGPNYYFKCIASGNPTPEISWYLDGKKLVN 117 (119)
Q Consensus 63 ~~~~~v~~-----------------~~~~~~~~~~-~~~~~~~~g~~~~l~C~~~~~p~~~~~W~~~~~~~~~ 117 (119)
...+.+.. ...+|.+... +....+..|+.+.|.|.+.+.|.|.+.|+++|..+..
T Consensus 193 ~~~l~v~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~v~~g~~~~l~C~~~g~p~p~i~W~~~g~~~~~ 265 (317)
T 2y25_A 193 TVDLSGQAYDEAYAEFQRLKQAAIAEKNRARVLGGLPDVVTIQEGKALNLTCNVWGDPPPEVSWLKNEKALAS 265 (317)
T ss_dssp EEEECHHHHHHHHHHHHHHHHHHHHTTTSCEEEEBCCSEEEEETTSBBCEEEEEECSSCCEEEEEESSSEECC
T ss_pred EEEEeeeeccccchhhcccCCcccCcCCCCcccccCCccEEEEcCCEEEEEEEEecCCCCEEEEEECCEeCCC
Confidence 44443210 0012333332 3345678999999999999999999999999987754
No 97
>2ifg_A High affinity nerve growth factor receptor; TRK, TRKA, receptor-ligand complex transferase; HET: NAG NDG MAN BMA; 3.40A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 c.10.2.7
Probab=99.78 E-value=7.8e-19 Score=105.19 Aligned_cols=110 Identities=15% Similarity=0.297 Sum_probs=85.2
Q ss_pred CCccEEEEEEeccCCCCeeEEeeCCccCC-------CCCCCeEEEecCCCCCCe-EEEEEEEcCCCCceeEeeEEEeeec
Q psy12725 1 MLALKFFTCKYEGNPVKTISWMKDGKPVP-------DHNEPVFRIDSVRKEDKG-MYQCVIRNEQESAQASGELKLGGRF 72 (119)
Q Consensus 1 ~g~~~~l~c~~~~~~~~~v~w~~~~~~~~-------~~~~~~l~~~~~~~~d~g-~y~C~~~~~~~~~~~~~~~~v~~~~ 72 (119)
.|+.+.|.|.+.+.|.+.+.|++++..+. ......|.|..++..|.| .|.|.+.+..+.......+.+.
T Consensus 172 ~G~~v~L~C~~~g~p~p~i~W~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~D~G~~Y~C~a~n~~g~~~~~~~l~V~--- 248 (347)
T 2ifg_A 172 VGDDVLLRCQVEGRGLEQAGWILTELEQSATVMKSGGLPSLGLTLANVTSDLNRKNVTCWAENDVGRAEVSVQVNVS--- 248 (347)
T ss_dssp TTCCEEEEEEEECSSCCCCCEEESCCCSSEEECCCCCSSEEEEEEESCCSTTTTCCEEECCEETTEECCEEECCCCB---
T ss_pred CCCcEEEEEEEecCCCCEEEEEcCCceeecccccceecccceEEEeeCChHHCCCeEEEEEEcCCCCEEEEEEEEEc---
Confidence 48999999999999999999999886542 123467999999999999 9999999986555444444432
Q ss_pred CCCeeeecCCccccCCCCcEEEEeEEccCCCCeEEEEECCEEccc
Q psy12725 73 DPPVIKESFSDETLNPGPNYYFKCIASGNPTPEISWYLDGKKLVN 117 (119)
Q Consensus 73 ~~~~~~~~~~~~~~~~g~~~~l~C~~~~~p~~~~~W~~~~~~~~~ 117 (119)
.+|.+ .......|+.+.|.|.+.|.|.|.+.|+++|..+..
T Consensus 249 ~~P~i----~~~~~~~g~~v~l~C~~~g~P~p~i~W~~~g~~l~~ 289 (347)
T 2ifg_A 249 FPASV----QLHTAVEMHHWCIPFSVDGQPAPSLRWLFNGSVLNE 289 (347)
T ss_dssp EEEEE----EECCCEESSSEEEEEEEEEESCCEEEEEETTEECCC
T ss_pred CCCee----eeccCccCceEEEEEEeeecCCCcEEEEeCCEECCC
Confidence 24443 112345789999999999999999999999998764
No 98
>3bkj_L WO2 IGG2A FAB fragment light chain kappa; abeta, FAB, WO2, alzheimer'S disease, immunotherapies, APP, immune system; 1.59A {Mus musculus} PDB: 3bkc_L 3bkm_L 2zuq_B* 1h3p_L
Probab=99.78 E-value=2.1e-18 Score=99.23 Aligned_cols=117 Identities=19% Similarity=0.308 Sum_probs=80.2
Q ss_pred CCccEEEEEEeccCC-----CCeeEEeeCCc--cC--------------CC-------CCCCeEEEecCCCCCCeEEEEE
Q psy12725 1 MLALKFFTCKYEGNP-----VKTISWMKDGK--PV--------------PD-------HNEPVFRIDSVRKEDKGMYQCV 52 (119)
Q Consensus 1 ~g~~~~l~c~~~~~~-----~~~v~w~~~~~--~~--------------~~-------~~~~~l~~~~~~~~d~g~y~C~ 52 (119)
.|+.|+|.|.+.+.+ .+.+.|||++. .. .. .....|.|.+++.+|+|.|.|.
T Consensus 48 ~G~~v~L~C~~~~~~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~D~G~Y~C~ 127 (252)
T 3bkj_L 48 LGEQASISCRSSQSIVHSNGHTYLEWYLQRPGQSPKLLIYQVSTRFSGVPDRFSGSGSGTDFTLRISRVEAEDLGVYYCF 127 (252)
T ss_dssp TTSCEEEEEEESSCCBCTTSCBCEEEEEECTTSCCEEEEETTTEECTTCCTTEEEEEETTEEEEEESSCCGGGCEEEEEE
T ss_pred CCCcEEEEEEcCCCccccCCCCcEEEEEECCCCCcEEEEEcCCcccCCcCCceEEEccCCEEEEEECCCCcccCEEEEEE
Confidence 489999999998876 58899998541 11 00 0123799999999999999999
Q ss_pred EEcCCCCc-eeEeeEEEeeecCCCeeeecCCccccCCCCcEEEEeEEccC-CCC-eEEEEECCEEccc
Q psy12725 53 IRNEQESA-QASGELKLGGRFDPPVIKESFSDETLNPGPNYYFKCIASGN-PTP-EISWYLDGKKLVN 117 (119)
Q Consensus 53 ~~~~~~~~-~~~~~~~v~~~~~~~~~~~~~~~~~~~~g~~~~l~C~~~~~-p~~-~~~W~~~~~~~~~ 117 (119)
+.+..... .....+.|.....+|.+...+......+|+.+.|.|.+.+. |.+ .+.|+++|..+..
T Consensus 128 ~~~~~~~~~~~~~~l~V~~~~~~P~v~~~~~~~~~~~g~~v~L~C~~~g~~p~~~~v~W~k~g~~~~~ 195 (252)
T 3bkj_L 128 QASLVPLTFGAGTKLELKRADAAPTVSIFPPSSEQLTSGGASVVCFLNNFYPKDINVKWKIDGSERQN 195 (252)
T ss_dssp ECSBSSCEECCCEEEEECCCCBCCEEEEECCCHHHHHHTEEEEEEEEEEEBSSCCEEEEEETTEEECS
T ss_pred EEcCCccEECCCEEEEEeCCCcCcEEEEeCCChhhcCCCcEEEEEEEeeEeCCCcEEEEEECCeecCC
Confidence 98864321 12234444332235666654433334468899999999874 444 7999999987653
No 99
>2c1o_A IGK-C protein; FAB fragment, enantioselective, finrozole, immune system, antibody, ENA11His antibody, immunoglobulin domain; 2.75A {Mus musculus}
Probab=99.77 E-value=2.1e-18 Score=99.23 Aligned_cols=117 Identities=18% Similarity=0.302 Sum_probs=79.3
Q ss_pred CCccEEEEEEeccCC-----CCeeEEeeCC--ccCC----------C--C---------CCCeEEEecCCCCCCeEEEEE
Q psy12725 1 MLALKFFTCKYEGNP-----VKTISWMKDG--KPVP----------D--H---------NEPVFRIDSVRKEDKGMYQCV 52 (119)
Q Consensus 1 ~g~~~~l~c~~~~~~-----~~~v~w~~~~--~~~~----------~--~---------~~~~l~~~~~~~~d~g~y~C~ 52 (119)
.|+.++|.|.+.+.+ .+.+.|+|++ ..+. . . ....|.|.+++.+|.|.|.|.
T Consensus 52 ~G~~v~L~C~~~~~~~~~~~~~~v~W~k~~~g~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~D~G~Y~C~ 131 (254)
T 2c1o_A 52 IGQPASISCKSSQSLLYSNGKTYLNWLLQRPGQSPKRLIYLVSKLDSGDPDRFTGSGSGTDFTLKISRVEAEDLGIYYCV 131 (254)
T ss_dssp TTSCEEEEEEESSCCBCSSSCBCEEEEEECTTSCCEEEEETTTEECTTCCTTEEEEEETTEEEEEESSCCGGGCSEEEEE
T ss_pred CCCcEEEEeeccCcccccCCCCceEEEEeCCCCCceEEEEeccccCCCccceEEEecCCCEEEEEECcCCcccCEEEEEE
Confidence 489999999998876 4899999743 2110 0 0 123799999999999999999
Q ss_pred EEcCCCCc-eeEeeEEEeeecCCCeeeecCCccccCCCCcEEEEeEEccC-CC-CeEEEEECCEEccc
Q psy12725 53 IRNEQESA-QASGELKLGGRFDPPVIKESFSDETLNPGPNYYFKCIASGN-PT-PEISWYLDGKKLVN 117 (119)
Q Consensus 53 ~~~~~~~~-~~~~~~~v~~~~~~~~~~~~~~~~~~~~g~~~~l~C~~~~~-p~-~~~~W~~~~~~~~~ 117 (119)
+.+..... .....+.+.....+|.+...+.......|+.+.|.|.+.+. |+ +.+.|+++|..+..
T Consensus 132 a~n~~~~~~~~~~~l~V~~~~~~P~v~~~~~~~~~~~g~~v~l~C~~~g~~p~~~~v~W~k~g~~l~~ 199 (254)
T 2c1o_A 132 QGSHFPPTFGAGTKLELKRADAAPTVSIFPPSSEQLTSGGASVVCFLNNFYPKDINVKWKIDGSERQN 199 (254)
T ss_dssp ECSSSSCEEBCCEEEEECCCCBCCEEEEECCCHHHHHTTEEEEEEEEEEEBSSCCEEEEEESSSEECT
T ss_pred EEcCcceEecCCEEEEECCCCCCCeeEeecCChhhccCCcEEEEEEEecccCCCcEEEEEECCCcccC
Confidence 98874321 11234444332235666654433333457799999999875 43 35999999987654
No 100
>2vol_A Murine IGG FC; FC, zinc, B30.2, nucleus, pryspry, cytoplasm, mouse IGG, zinc-finger, DNA-binding, RNA-binding, tripartite motif (TRIM) protein; HET: NAG MAN GAL FUC; 1.95A {Mus musculus} PDB: 3hkf_A 1i1a_C* 1cqk_A
Probab=99.77 E-value=1e-18 Score=98.05 Aligned_cols=116 Identities=14% Similarity=0.187 Sum_probs=79.7
Q ss_pred CCccEEEEEEeccCC----CCeeEEeeCCccCCCC--------C------CCeEEEecCCCCCCeEEEEEEEcCCCCcee
Q psy12725 1 MLALKFFTCKYEGNP----VKTISWMKDGKPVPDH--------N------EPVFRIDSVRKEDKGMYQCVIRNEQESAQA 62 (119)
Q Consensus 1 ~g~~~~l~c~~~~~~----~~~v~w~~~~~~~~~~--------~------~~~l~~~~~~~~d~g~y~C~~~~~~~~~~~ 62 (119)
+|+.+.|.|.+.+.+ ...|.|+|++..+... . ...|.|.+++..|.|.|.|.+.+..+....
T Consensus 17 ~G~~v~L~C~~~g~~~~p~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~L~I~~~~~~D~G~Y~C~a~~~~~~~~~ 96 (207)
T 2vol_A 17 ITLTPKVTCVVVDISKDDPEVQFSWFVDDVEVHTAQTKPREEQFNSTFRSVSELPIMHQDWLNGKEFKCRVNSAAFPAPI 96 (207)
T ss_dssp TTSCCEEEEEEEEECTTCCCCEEEEEETTEEECCCEEECCCEETTTEEEEEEEEECCHHHHHTTCCEEEEEECTTCSSCE
T ss_pred cCCceEEEEEEeCcccCCCceEEEEEECCccccccccCCCcCcCCCcEEEEEEEEEehhHcCCCCEEEEEEEccCCCCce
Confidence 489999999998763 2489999988654321 1 135778888889999999999997654322
Q ss_pred EeeEEEe-eecCCCeeeecCCccccCCCCcEEEEeEEccC-CCC-eEEEEECCEEcc
Q psy12725 63 SGELKLG-GRFDPPVIKESFSDETLNPGPNYYFKCIASGN-PTP-EISWYLDGKKLV 116 (119)
Q Consensus 63 ~~~~~v~-~~~~~~~~~~~~~~~~~~~g~~~~l~C~~~~~-p~~-~~~W~~~~~~~~ 116 (119)
...+.+. ....+|.+...+.......|+.+.|.|.+.+. |.+ .+.|+++|..+.
T Consensus 97 ~~~v~~~~~~~~~P~v~~~~~~~~~~~g~~~~L~C~~~g~~P~~~~v~W~k~g~~l~ 153 (207)
T 2vol_A 97 EKTISKTKGRPKAPQVYTLPPPKEQMAKDKVSLTCMITDFFPEDITVEWESNGQPAE 153 (207)
T ss_dssp EEEECCCCCCCBCCEEEEECCCTGGGSSSEEEEEEEEEEEBSSCCEEEEEETTEECS
T ss_pred EEEeccCCCCCcCCeEEEeCCCHHHhcCCceEEEEEEeeEECCCCEEEEEECCEecc
Confidence 2222210 11246666554443333468999999999885 443 899999999774
No 101
>3o3u_N Maltose-binding periplasmic protein, advanced Gly END product-specific receptor; RAGE, AGER, scavenger receptor; HET: MLR; 1.50A {Escherichia coli} PDB: 3s59_A 3s58_A 3cjj_A 2l7u_A* 2e5e_A
Probab=99.77 E-value=6.4e-18 Score=106.91 Aligned_cols=115 Identities=22% Similarity=0.377 Sum_probs=82.4
Q ss_pred CCccEEEEEEe-ccCCCCeeEEeeCCccCC------------------CCCCCeEEEecCCCCCCeEEEEEEEcCCCCc-
Q psy12725 1 MLALKFFTCKY-EGNPVKTISWMKDGKPVP------------------DHNEPVFRIDSVRKEDKGMYQCVIRNEQESA- 60 (119)
Q Consensus 1 ~g~~~~l~c~~-~~~~~~~v~w~~~~~~~~------------------~~~~~~l~~~~~~~~d~g~y~C~~~~~~~~~- 60 (119)
+|+.++|.|.+ .+.|.+.+.|++++..+. .....+|.|.+++.+|.|.|+|.+.+..+..
T Consensus 380 ~G~~v~L~C~~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~L~i~~v~~~D~G~Y~C~~~n~~~~~~ 459 (581)
T 3o3u_N 380 IGEPLVLKCKGAPKKPPQRLEWKLNTGRTEAWKVLSPQGGGPWDSVARVLPNGSLFLPAVGIQDEGIFRCQAMNRNGKET 459 (581)
T ss_dssp TTSCEEECCTTCCSSSSCEEEEEEEETTSSSCEECCSCCSSGGGGTSEECTTSCEEESSCCGGGCEEEEEEEECTTSCEE
T ss_pred cCCcEEEeeeecCCCCCceEEEEEcCCeeEEEEecccCCCCCcCCcEEEcCCceEEEeccccccCeEEEEEEEcCCCcee
Confidence 48999999999 677888999999765220 0123579999999999999999999987654
Q ss_pred eeEeeEEEeeecCCCeeeecCCccccCCCCc-EEEEeEEcc-CCCCeEEEEECCEEccc
Q psy12725 61 QASGELKLGGRFDPPVIKESFSDETLNPGPN-YYFKCIASG-NPTPEISWYLDGKKLVN 117 (119)
Q Consensus 61 ~~~~~~~v~~~~~~~~~~~~~~~~~~~~g~~-~~l~C~~~~-~p~~~~~W~~~~~~~~~ 117 (119)
.....+.|......|.+.... ..+..+.. +.|.|.+.+ .|.|.+.|+++|..+..
T Consensus 460 ~~~~~l~V~~~~~~p~i~~~~--~~~~~~~~~~~l~C~~~~~~P~~~i~W~~~g~~l~~ 516 (581)
T 3o3u_N 460 KSNYRVRVYQIPGKPEIVDSA--SELTAGVPNKVGTCVSEGSYPAGTLSWHLDGKPLVP 516 (581)
T ss_dssp EEEEEEEEEBCCCCCEEESCC--SEECTTSCEEEEEEEEEEEBSCCEEEEEETTEECCT
T ss_pred EEEEEEEEEcCCCCCEEEcCC--cccccCCceeEEEEECCCCCCCCeEEEEECCEECCC
Confidence 444555554322334433322 23445544 466999887 58899999999998763
No 102
>3laf_A Deleted in colorectal cancer; netrin-1 receptor, immunoglobulin superfamily, horseshoe, AP; HET: NAG BMA; 2.40A {Rattus norvegicus}
Probab=99.77 E-value=6.1e-18 Score=102.61 Aligned_cols=115 Identities=24% Similarity=0.362 Sum_probs=85.3
Q ss_pred CCccEEEEEEecc-CCCCeeEEeeCCccCCCC--------CCCeEEEecC-----CCCCCeEEEEEEEcCCCCceeEeeE
Q psy12725 1 MLALKFFTCKYEG-NPVKTISWMKDGKPVPDH--------NEPVFRIDSV-----RKEDKGMYQCVIRNEQESAQASGEL 66 (119)
Q Consensus 1 ~g~~~~l~c~~~~-~~~~~v~w~~~~~~~~~~--------~~~~l~~~~~-----~~~d~g~y~C~~~~~~~~~~~~~~~ 66 (119)
.|+.+.|.|.+.+ .|.+.+.|+|++..+... ....+.+.++ +..|.|.|.|.+.+.......+..+
T Consensus 35 ~G~~v~L~C~~~~~~p~~~v~W~k~g~~~~~~~~~~~~~~~~~~l~i~~~~~~~~~~~D~G~Y~C~~~~~~~~~~~s~~~ 114 (403)
T 3laf_A 35 RGGNVLLNCSAESDRGVPVIKWKKDGLILALGMDDRKQQLPNGSLLIQNILHSRHHKPDEGLYQCEASLGDSGSIISRTA 114 (403)
T ss_dssp TTCCEEECCEEECTTCCCEEEEEETTEECCTTSCTTEEECTTSCEEECSCCCBTTBCSSCEEEEEEEECGGGCEEECCCE
T ss_pred cCCcEEEEEEcCCCCCCceEEEEECCEECccCCcccEEEecCCcEEEeeeeccCCCCCcceEEEEEEEeCCCccEEEEEE
Confidence 3899999999976 477889999999877432 2456777776 6679999999998643322223333
Q ss_pred EEeeecCCCeeeecCCccccCCCCcEEEEeEEccCCCCeEEEEECCEEcc
Q psy12725 67 KLGGRFDPPVIKESFSDETLNPGPNYYFKCIASGNPTPEISWYLDGKKLV 116 (119)
Q Consensus 67 ~v~~~~~~~~~~~~~~~~~~~~g~~~~l~C~~~~~p~~~~~W~~~~~~~~ 116 (119)
.+.+. .++.+...+....+.+|+.+.|.|.+.+.|.+.+.|++++..+.
T Consensus 115 ~l~v~-~p~~~~~~~~~~~~~~G~~v~l~C~~~~~p~~~v~W~~~~~~~~ 163 (403)
T 3laf_A 115 KVMVA-GPLRFLSQTESITAFMGDTVLLKCEVIGDPMPTIHWQKNQQDLN 163 (403)
T ss_dssp EEEEC-CCCEECSCCCCEEEETTSCEEECCCEECSSCCEEEEEESSSBCC
T ss_pred EEEec-CCCccccCCCcEEEEcCCeEEEEEEEcccCCCeEEEEECCEecc
Confidence 44332 45666655556678899999999999888889999999987763
No 103
>2rcj_C Light chain; immunoglobulin M, polymeric antibodies, immunology, X-RAY solution scattering, constrained modelling, immune system; NMR {Homo sapiens}
Probab=99.77 E-value=8e-18 Score=105.29 Aligned_cols=116 Identities=14% Similarity=0.208 Sum_probs=83.8
Q ss_pred CCccEEEEEEeccCCCCeeEEeeCC--ccCC--------------C-------CCCCeEEEecCCCCCCeEEEEEEEcCC
Q psy12725 1 MLALKFFTCKYEGNPVKTISWMKDG--KPVP--------------D-------HNEPVFRIDSVRKEDKGMYQCVIRNEQ 57 (119)
Q Consensus 1 ~g~~~~l~c~~~~~~~~~v~w~~~~--~~~~--------------~-------~~~~~l~~~~~~~~d~g~y~C~~~~~~ 57 (119)
.|+.+.|.|.+.+.+.+.+.|||++ ..+. . .....|.|.+++.+|+|.|.|.+.+..
T Consensus 14 ~G~~v~L~C~~~~~~~~~v~W~k~~~g~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~n~~ 93 (523)
T 2rcj_C 14 PGQRVTISCTGTSSGSITVNWYQQLPGMAPKLLIYRDAMRPSGVPTRFSGSKSGTSASLAISGLEAEDESDYYCASWNSS 93 (523)
T ss_pred cCCcEEEEEEEeccCCceEEEEEeCCCCCcEEEEEeccccCcccCCcEEEecCCCEEEEEECCCChhhCEEEEEEEccCC
Confidence 4899999999988888899999964 1110 0 112479999999999999999999865
Q ss_pred CC---ceeEeeEEEeee-cCCCeeeecCCccccCCCCcEEEEeEEccCCCC--eEEEEECCEEcc
Q psy12725 58 ES---AQASGELKLGGR-FDPPVIKESFSDETLNPGPNYYFKCIASGNPTP--EISWYLDGKKLV 116 (119)
Q Consensus 58 ~~---~~~~~~~~v~~~-~~~~~~~~~~~~~~~~~g~~~~l~C~~~~~p~~--~~~W~~~~~~~~ 116 (119)
+. ......+.|... ..+|.+...+....+.+|+.+.|.|.+.+.+++ .+.|+++|..+.
T Consensus 94 g~~~~~~~~~~l~V~~~~~~~P~~~~~~~~~~~~~g~~v~l~C~~~g~~p~~~~v~W~k~g~~l~ 158 (523)
T 2rcj_C 94 DNSYVFGTGTKVTVLGQPKANPTVTLFPPSSEELQANKATLVCLISDFYPGAVTVAWKADGSPVK 158 (523)
T ss_pred CccccccCceEEEeccCCCcCCeEEecCCcccccCCCceEEEEEeccccCCceEEEEecCCCCCC
Confidence 32 122334444211 235666655555556789999999999888654 899999998764
No 104
>3oq3_B IFN-alpha/beta binding protein C12R; mousepox virus, moscow strain, cytokine decoy RE virus/viral protein, type-1 interferon, soluble A/B-IFNR; HET: EPE; 2.10A {Ectromelia virus}
Probab=99.77 E-value=2.5e-18 Score=102.29 Aligned_cols=114 Identities=14% Similarity=0.153 Sum_probs=85.4
Q ss_pred CCccEEEEEEeccC---------CCCeeEEeeCCccCCC----CCCCeEEEecCCCCCCe-EEEEEEEcCCCCceeEeeE
Q psy12725 1 MLALKFFTCKYEGN---------PVKTISWMKDGKPVPD----HNEPVFRIDSVRKEDKG-MYQCVIRNEQESAQASGEL 66 (119)
Q Consensus 1 ~g~~~~l~c~~~~~---------~~~~v~w~~~~~~~~~----~~~~~l~~~~~~~~d~g-~y~C~~~~~~~~~~~~~~~ 66 (119)
.|+.+.|.|.+.+. |.+.+.|+|++..+.. .....|.|.+++.+|.| .|.|.+.+..+........
T Consensus 43 eG~~v~L~C~~~~~~~~~~~~~~p~~~v~W~k~~~~~~~~~~~~~~~~L~i~~v~~~D~Gs~Y~C~a~n~~g~~~~~~~~ 122 (329)
T 3oq3_B 43 LGEPFSAKCPPIEDSLLSHRYNDKDNVVNWEKIGKTRRPLNRRVKNGDLWIANYTSNDSHRRYLCTVTTKNGDCVQGIVR 122 (329)
T ss_dssp TTSCEEECCHHHHCTTTGGGSCCTTCEEEEEECSSSCEECSTTEETTEEEESSCCGGGGGCCEEEEEECTTSCEEEEEEE
T ss_pred CCCeEEEEccCCCCccccccccCCCCeeEEEECCCCccccCceeecceEEEcCCChHhCCCcEEEEEEeCCCceeeEEEE
Confidence 38999999999874 5578999999876532 23578999999999999 9999999987543332222
Q ss_pred EEeeecCCCeeeecCCccccCCCCcEEEEeEEccCC-CCeEEEEECCEEcc
Q psy12725 67 KLGGRFDPPVIKESFSDETLNPGPNYYFKCIASGNP-TPEISWYLDGKKLV 116 (119)
Q Consensus 67 ~v~~~~~~~~~~~~~~~~~~~~g~~~~l~C~~~~~p-~~~~~W~~~~~~~~ 116 (119)
.+. ..+|.+........+.+|+.+.|.|.+.+.| .+.+.|++++..+.
T Consensus 123 ~v~--~~~p~~~~~~~~~~~~~G~~v~L~C~~~g~p~~~~i~W~k~~~~l~ 171 (329)
T 3oq3_B 123 SHI--RKPPSCIPETYELGTHDKYGIDLYCGILYAKHYNNITWYKNNQELI 171 (329)
T ss_dssp EEE--CCCCSCEEEEEETTSSTTTCEEEECCCCSCCCCCEEEEEETTEECC
T ss_pred EEE--cCCCcEeccccceEEeCCCcEEEEeccCCCCCCceEEEEECCccCC
Confidence 221 2344444333344567899999999999998 88999999999874
No 105
>1nfd_E H57 FAB; complex (immunoreceptor-immunoglobulin), complex (immunorece immunoglobulin) complex; HET: NAG NDG; 2.80A {Mus musculus} SCOP: b.1.1.1 b.1.1.2
Probab=99.77 E-value=7.8e-19 Score=98.59 Aligned_cols=117 Identities=15% Similarity=0.291 Sum_probs=79.9
Q ss_pred CCccEEEEEEeccCCCCeeEEeeCC--ccC--------------CC-------CCCCeEEEecCCCCCCeEEEEEEEcCC
Q psy12725 1 MLALKFFTCKYEGNPVKTISWMKDG--KPV--------------PD-------HNEPVFRIDSVRKEDKGMYQCVIRNEQ 57 (119)
Q Consensus 1 ~g~~~~l~c~~~~~~~~~v~w~~~~--~~~--------------~~-------~~~~~l~~~~~~~~d~g~y~C~~~~~~ 57 (119)
.|+.++|.|.+.+.+.+.+.|||+. ..+ .. .....|.|.+++.+|+|.|.|.+.+..
T Consensus 13 ~G~~v~L~C~~~~~~~~~v~W~k~~~g~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~D~G~Y~C~~~n~~ 92 (212)
T 1nfd_E 13 VGETVKITCSGDQLPKNFAYWFQQKSDKNILLLIYMDNKRPSGIPERFSGSTSGTTATLTISGAQPEDEAAYYCLSSYGD 92 (212)
T ss_dssp TTSCCCEEEEETTGGGSCCEEEEECTTCCEEEEEBTTTBCCTTSCTTEEEEEETTEEEEEETTCCGGGCSEEEEEEEETT
T ss_pred CCCcEEEEEecCCCCCCeEEEEEECCCCCcEEEEEeccccCCCccccEEEEeeCCEEEEEECcCCcccCEEEEEEEEccc
Confidence 4899999999987777789999853 221 00 012379999999999999999999632
Q ss_pred CC-c--eeEeeEEEeee-cCCCeeeecCCccccCCCCcEEEEeEEccC-CC-CeEEEEECCEEccc
Q psy12725 58 ES-A--QASGELKLGGR-FDPPVIKESFSDETLNPGPNYYFKCIASGN-PT-PEISWYLDGKKLVN 117 (119)
Q Consensus 58 ~~-~--~~~~~~~v~~~-~~~~~~~~~~~~~~~~~g~~~~l~C~~~~~-p~-~~~~W~~~~~~~~~ 117 (119)
.. . .....+.+... ..+|.+...+......+|+.+.|.|.+.+. |+ +.+.|+++|..+..
T Consensus 93 ~~~~~~~~~~~l~V~~~~~~~p~v~~~~~~~~~~~g~~v~L~C~~~g~~p~~~~v~W~k~g~~~~~ 158 (212)
T 1nfd_E 93 NNDLVFGSGTQLTVLRGPKSSPKVTVFPPSPEELRTNKATLVCLVNDFYPGSATVTWKANGATIND 158 (212)
T ss_dssp TTEEEECCCEEEEEECCCCBCCEEECCCCCHHHHHTTEECCCEEEEEEBSSCCEEEEEETTEEECS
T ss_pred CcccccCCceEEEEccCCCCCCEEEeeCCchHhccCCceEEEEEEEeeECCccEEEEEECCeEcCC
Confidence 11 1 11233443221 135666554443344578899999999877 54 68999999988753
No 106
>2ghw_B Anti-SARS SCFV antibody, 80R; S protein, neutralizing antibody, virus/viral protein/antibiotic complex; 2.30A {Homo sapiens} SCOP: b.1.1.1 b.1.1.1
Probab=99.77 E-value=1.3e-17 Score=95.53 Aligned_cols=113 Identities=19% Similarity=0.343 Sum_probs=77.7
Q ss_pred CCccEEEEEEeccCC--CCeeEEeeCC--ccC-------------------CC---------CCCCeEEEecCCCCCCeE
Q psy12725 1 MLALKFFTCKYEGNP--VKTISWMKDG--KPV-------------------PD---------HNEPVFRIDSVRKEDKGM 48 (119)
Q Consensus 1 ~g~~~~l~c~~~~~~--~~~v~w~~~~--~~~-------------------~~---------~~~~~l~~~~~~~~d~g~ 48 (119)
.|+.|+|.|.+.+.| .+.+.|+|+. ... .. .....|.|.+++.+|+|.
T Consensus 16 ~G~~v~L~C~~~g~p~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~I~~v~~~D~G~ 95 (247)
T 2ghw_B 16 PGKSLRLSCAASGFAFSSYAMHWVRQAPGKGLEWVAVISYDGSNKYYADSVKGRFTISRDNSKNTLYLQMNSLRAEDTAV 95 (247)
T ss_dssp TTCCEEEEEEEESSCGGGSCEEEEEECTTSCEEEEEEECTTSSCEEECTTTTTTEEEEEETTTTEEEEEECSCCGGGCEE
T ss_pred cCCcEEEEEEeccccCCCceEEEEEeCCCCceEEEEEEecCCCceeeCccccCcEEEEEeCCCCEEEEEECcCCHHHCEE
Confidence 489999999998876 5789999842 110 00 012369999999999999
Q ss_pred EEEEEEcCCCC--ceeEeeEEEeee------------cCCCeeeecCCccccCCCCcEEEEeEEccCCCCeEEEEE--CC
Q psy12725 49 YQCVIRNEQES--AQASGELKLGGR------------FDPPVIKESFSDETLNPGPNYYFKCIASGNPTPEISWYL--DG 112 (119)
Q Consensus 49 y~C~~~~~~~~--~~~~~~~~v~~~------------~~~~~~~~~~~~~~~~~g~~~~l~C~~~~~p~~~~~W~~--~~ 112 (119)
|.|.+.+.... ......+.|... ..++.+...+....+.+|+.+.|.|.+.+.+.+.+.|++ ++
T Consensus 96 Y~C~~~n~~~~~~~~~~~~l~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~G~~v~L~C~~~~~~~~~v~W~k~~~g 175 (247)
T 2ghw_B 96 YYCARDRSYYLDYWGQGTLVTVSSGGGGSGGGGSGGGGSETTLTQSPATLSLSPGERATLSCRASQSVRSNLAWYQQKPG 175 (247)
T ss_dssp EEEEEEETTEEEEECCCEEEEECSCC------------CCCCEEEECSEEEECTTSCEEEEEEESSCCTTCEEEEEECTT
T ss_pred EEEeeeccCCccccCCceEEEEecccccccccccCCCCcceEEEccCCEEEecCCCcEEEEEEeCCCccceEEEEEECCC
Confidence 99999986211 112234444321 113334444445567899999999999999888999998 55
Q ss_pred E
Q psy12725 113 K 113 (119)
Q Consensus 113 ~ 113 (119)
.
T Consensus 176 ~ 176 (247)
T 2ghw_B 176 Q 176 (247)
T ss_dssp S
T ss_pred C
Confidence 4
No 107
>3ejj_X Macrophage colony-stimulating factor 1 receptor; growth factor-receptor complex, receptor tyrosine kinase, CY 4-helix bundle, ATP-binding; HET: NAG; 2.40A {Mus musculus} PDB: 4exp_X*
Probab=99.77 E-value=1.6e-17 Score=96.85 Aligned_cols=117 Identities=21% Similarity=0.184 Sum_probs=86.1
Q ss_pred CCccEEEEEEeccCCCCe-eEEee-CCccCCCC------CCCeEEEecCCCCCCeEEEEEEEc-CCCCceeEeeEEEeee
Q psy12725 1 MLALKFFTCKYEGNPVKT-ISWMK-DGKPVPDH------NEPVFRIDSVRKEDKGMYQCVIRN-EQESAQASGELKLGGR 71 (119)
Q Consensus 1 ~g~~~~l~c~~~~~~~~~-v~w~~-~~~~~~~~------~~~~l~~~~~~~~d~g~y~C~~~~-~~~~~~~~~~~~v~~~ 71 (119)
.|+.+.|.|.+.+.+.+. +.|++ ++..+... ....|.|..++..|.|.|.|.+.+ ..+.......+.+...
T Consensus 103 ~g~~v~L~C~~~~~~~~~~v~W~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~~~~~~~~~~~~~l~V~~~ 182 (289)
T 3ejj_X 103 EGQEAVLPCLITDPALKDSVSLMREGGRQVLRKTVYFFSPWRGFIIRKAKVLDSNTYVCKTMVNGRESTSTGIWLKVNRV 182 (289)
T ss_dssp TTSCEEECEEESCGGGGGSEEEEEGGGEECCTTCCEEEETTTEEEESSCCGGGCEEEEEEEEETTEEEECCCEEEEEESS
T ss_pred cCCceEeEEEccCCCcceEEEEEecCCeecCCCccEEECCCCCEEEeecccccCEEEEEEEEeCCCccccccEEEEEEEC
Confidence 388999999998866554 99986 55544322 346799999999999999999984 3222223344444321
Q ss_pred -cCCCeeeecCCccccCCCCcEEEEeEEcc-CCCCeEEEEECCEEccc
Q psy12725 72 -FDPPVIKESFSDETLNPGPNYYFKCIASG-NPTPEISWYLDGKKLVN 117 (119)
Q Consensus 72 -~~~~~~~~~~~~~~~~~g~~~~l~C~~~~-~p~~~~~W~~~~~~~~~ 117 (119)
..+|.+...+....+..|+.+.|.|.+.+ .|.+.+.|++++..+..
T Consensus 183 ~~~~p~i~~~~~~~~~~~g~~~~l~C~~~~~~p~~~i~W~~~~~~~~~ 230 (289)
T 3ejj_X 183 HPEPPQIKLEPSKLVRIRGEAAQIVCSATNAEVGFNVILKRGDTKLEI 230 (289)
T ss_dssp CCCCCEEEEESSSEECCSSSCEEEEEEEEESSSCCEEEEEETTEECCC
T ss_pred CCCCCeEEecCCceEEEeCCcEEEEEEeCCCCCceEEEEEECCEEeec
Confidence 14677777666666789999999999988 68889999999987753
No 108
>2ny1_B T-cell surface glycoprotein CD4; HIV, GP120, CD4, viral protein-immune system compl; HET: NAG SUC; 1.99A {Homo sapiens} SCOP: b.1.1.1 b.1.1.3 PDB: 2nxz_B* 2ny0_B* 2nxy_B* 2ny2_B* 2ny3_B* 2ny4_B* 2ny5_C* 2ny6_B* 3jwd_C* 3jwo_C* 1g9m_C* 1g9n_C* 1gc1_C* 1rzj_C* 1rzk_C* 3o2d_A 3cd4_A 3lqa_C* 2b4c_C* 2qad_B* ...
Probab=99.77 E-value=1.6e-18 Score=95.44 Aligned_cols=103 Identities=17% Similarity=0.259 Sum_probs=77.1
Q ss_pred CCccEEEEEEeccCCCCeeEEeeCCcc--CC------------------------CCCCCeEEEecCCCCCCeEEEEEEE
Q psy12725 1 MLALKFFTCKYEGNPVKTISWMKDGKP--VP------------------------DHNEPVFRIDSVRKEDKGMYQCVIR 54 (119)
Q Consensus 1 ~g~~~~l~c~~~~~~~~~v~w~~~~~~--~~------------------------~~~~~~l~~~~~~~~d~g~y~C~~~ 54 (119)
.|+.+.|.|.+.+.+.+.+.|++++.. +. ......|.|.+++..|.|.|.|.+.
T Consensus 9 ~G~~v~L~C~~~~~~~~~i~W~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~~~ 88 (184)
T 2ny1_B 9 KGDTVELTCTASQKKSIQFHWKNSNQIKILGNQGSFLTKGPSKLNDRADSRRSLWDQGNFPLIIKNLKIEDSDTYICEVE 88 (184)
T ss_dssp TTSCEEECCBCSSSSCCCEEEEETTCCEEEEEETTEEEECSCTTGGGEECCGGGGGGTBCCEEECSCCGGGCEEEEEEET
T ss_pred CCCCEEEEEEEcCCCceEEEEEeCCccceEEecCceEecCChhhCCccccccccccCCeEEEEEecCCHHHCEEEEEEEE
Confidence 489999999998888889999998752 10 0114559999999999999999998
Q ss_pred cCCCCceeEeeEEEeeecCCCeeeecCCccccCCCCcEEEEeEEccCCCCeEEEEECCEE
Q psy12725 55 NEQESAQASGELKLGGRFDPPVIKESFSDETLNPGPNYYFKCIASGNPTPEISWYLDGKK 114 (119)
Q Consensus 55 ~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~g~~~~l~C~~~~~p~~~~~W~~~~~~ 114 (119)
+..+ ...+.+.. +.. +....+.+|+.+.|.|.+.+.|.+.+.|++++..
T Consensus 89 ~~~~----~~~l~V~~------~~~-~~~~~v~~g~~~~l~C~~~~~p~~~v~W~~~~~~ 137 (184)
T 2ny1_B 89 DQKE----EVQLLVFG------LTA-NSDTHLLQGQSLTLTLESPPGSSPSVQCRSPRGK 137 (184)
T ss_dssp TEEE----EEEEEEEE------EEE-SSCSEEETTCCEEEEEECCTTCCCEEEEECTTSC
T ss_pred cCCC----cEEEEEEE------ecC-CCCceeecCCCEEEEEEcCCCCCCEEEEEeCCCc
Confidence 7632 33333321 111 2334578899999999998889999999998754
No 109
>4f80_A Butyrophilin subfamily 3 member A1; B7 superfamily, CD277, immune system; 1.94A {Homo sapiens} PDB: 4f9l_A* 4f9p_A 4f8t_A 4f8q_A
Probab=99.77 E-value=3e-18 Score=97.14 Aligned_cols=107 Identities=18% Similarity=0.298 Sum_probs=73.2
Q ss_pred CCccEEEEEEeccCCCC---eeEEeeCCccCC-----------C------------------CCCCeEEEecCCCCCCeE
Q psy12725 1 MLALKFFTCKYEGNPVK---TISWMKDGKPVP-----------D------------------HNEPVFRIDSVRKEDKGM 48 (119)
Q Consensus 1 ~g~~~~l~c~~~~~~~~---~v~w~~~~~~~~-----------~------------------~~~~~l~~~~~~~~d~g~ 48 (119)
+|+.|.|.|.+.+.+.+ .|.|+|++.... . .....|.|.+++.+|+|.
T Consensus 18 ~G~~v~L~C~v~~~~~~~~~~V~W~k~~~~~~v~~~~~g~~~~~~~~~~~~~r~~~~~~~~~~~~~~L~I~~v~~~D~G~ 97 (226)
T 4f80_A 18 VGEDADLPCHLFPTMSAETMELKWVSSSLRQVVNVYADGKEVEDRQSAPYRGRTSILRDGITAGKAALRIHNVTASDSGK 97 (226)
T ss_dssp TTSCEEEEEEEESCCCCTTSEEEEEETTTCCEEEEEETTEECGGGSCTTTTTTEEEECTTGGGTEEEEEESSCCGGGCEE
T ss_pred cCCcEEEEEEEECCCCCCceEEEEEECCCCceEEEEeCCeEcccccCccccceEEEecccccCCeEEEEEeeCchHHCee
Confidence 49999999999765433 699998753210 0 012469999999999999
Q ss_pred EEEEEEcCCCCceeEeeEEEeeecCCCeeeecCCccccCCCCcEEEEeEEcc-CCCCeEEEEECC
Q psy12725 49 YQCVIRNEQESAQASGELKLGGRFDPPVIKESFSDETLNPGPNYYFKCIASG-NPTPEISWYLDG 112 (119)
Q Consensus 49 y~C~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~g~~~~l~C~~~~-~p~~~~~W~~~~ 112 (119)
|.|.+.+..+.... .+.+.... ..........+.+|+.+.+.|.+.+ .|.|.+.|++++
T Consensus 98 Y~C~a~n~~~~~~~--~v~~~~~~---~~~~~~~~~~~~~g~~v~l~c~~~g~~P~p~i~W~k~~ 157 (226)
T 4f80_A 98 YLCYFQDGDFYEKA--LVELKVAA---LGSDLHVDVKGYKDGGIHLECRSTGWYPQPQIQWSNNK 157 (226)
T ss_dssp EEEEEEETTEEEEE--EEEEEEEB---CCCCCEEEEEEEETTEEEEEEEEEEEBSCCEEEEECTT
T ss_pred EEEEEECCCcEEEE--EEEEeecc---ceecccceeeeccCCceeeEEEeccCCCCCEEEEEECC
Confidence 99999997544433 33333221 1111122334567899999999877 488999999854
No 110
>3bqu_C 3H6 FAB light chain; beta sheet, immune system; 3.00A {Mus musculus}
Probab=99.77 E-value=3.2e-19 Score=101.43 Aligned_cols=117 Identities=16% Similarity=0.284 Sum_probs=66.6
Q ss_pred CCccEEEEEEeccCCCCeeEEeeCCc--cC-----------C-CC---------CCCeEEEecCCCCCCeEEEEEEEcCC
Q psy12725 1 MLALKFFTCKYEGNPVKTISWMKDGK--PV-----------P-DH---------NEPVFRIDSVRKEDKGMYQCVIRNEQ 57 (119)
Q Consensus 1 ~g~~~~l~c~~~~~~~~~v~w~~~~~--~~-----------~-~~---------~~~~l~~~~~~~~d~g~y~C~~~~~~ 57 (119)
.|+.|.|.|.+.+.+.+.+.|+|++. .. . .. ....|.|.+++.+|+|.|.|.+.+..
T Consensus 37 ~G~~v~L~C~~~~~~~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~D~G~Y~C~~~~~~ 116 (233)
T 3bqu_C 37 IGEKVTIRCITSTDIDDDMNWYQQKPGEPPRLLISDGNTLRPGVPSRFSSSGYGTDFVFTIENMLSEDVADYYCLQSDNL 116 (233)
T ss_dssp ----CCEEEEEEEEESSCEEEEEECTTSCCEEEECTTSCBCTTSCTTCCCCEEEEEEEEC-----CCCCSEEEEEECSSS
T ss_pred cCCCEEEEEecCCcCCCeEEEEEECCCCCcEEEEEcCCccCCCCCccEEeeccCCEEEEEECCCCHHHCEEEEEEEecCC
Confidence 38899999999887777899998532 11 0 00 01268999999999999999998764
Q ss_pred CC-ceeEeeEEEeeecCCCeeeecCCccccCCCCcEEEEeEEccC-CCC-eEEEEECCEEccc
Q psy12725 58 ES-AQASGELKLGGRFDPPVIKESFSDETLNPGPNYYFKCIASGN-PTP-EISWYLDGKKLVN 117 (119)
Q Consensus 58 ~~-~~~~~~~~v~~~~~~~~~~~~~~~~~~~~g~~~~l~C~~~~~-p~~-~~~W~~~~~~~~~ 117 (119)
+. ......+.+.....+|.+...+.......|+.+.|.|.+.+. |.+ .+.|+++|..+..
T Consensus 117 ~~~~~~~~~l~V~~~~~~p~v~~~~~~~~~~~g~~v~L~C~~~g~~p~~~~v~W~k~g~~~~~ 179 (233)
T 3bqu_C 117 PYTFGGGTNLEIKRADAAPTVSIFPPSSEQLTSGGASVVCFLNNFYPKDINVKWKIDGSERQN 179 (233)
T ss_dssp SCCBCCCCBC---CCCBCCEEEEECCCHHHHHTTEEEEEEEEEEEBSSCEEEEEEEC-----C
T ss_pred ceeecCCEEEEEeCCCCCCEEEEeCCCHHhhcCCceEEEEEEccccCCceEEEEEECCeeCCC
Confidence 32 122234444332235666654433333468899999999885 443 6999999987653
No 111
>2x1w_L Vascular endothelial growth factor receptor 2; hormone-signaling protein complex, angiogenesis, glycoprotein, HOST-virus interaction, membrane; HET: NAG BMA; 2.70A {Homo sapiens} PDB: 2x1x_R*
Probab=99.77 E-value=4.8e-18 Score=95.61 Aligned_cols=109 Identities=21% Similarity=0.213 Sum_probs=75.3
Q ss_pred ccEEEEEEeccCCCCeeEEeeC---CccCCCC------CCCeEEEecCCCCCCeEEEEEEEcCCCCceeE--eeEEEeee
Q psy12725 3 ALKFFTCKYEGNPVKTISWMKD---GKPVPDH------NEPVFRIDSVRKEDKGMYQCVIRNEQESAQAS--GELKLGGR 71 (119)
Q Consensus 3 ~~~~l~c~~~~~~~~~v~w~~~---~~~~~~~------~~~~l~~~~~~~~d~g~y~C~~~~~~~~~~~~--~~~~v~~~ 71 (119)
+.+.|.|.+.+ |.+.+.|++. +..+... ....|.|.+++.+|.|.|.|.+.+..... .+ ..+.+..
T Consensus 25 ~~v~L~C~~~~-p~~~v~w~~~~~~g~~~~~~~~~~~~~~~~l~I~~v~~~D~G~Y~C~a~n~~~~~-~s~~~~l~v~~- 101 (213)
T 2x1w_L 25 KTVVIPCLGSI-SNLNVSLCARYPEKRFVPDGNRISWDSKKGFTIPSYMISYAGMVFCEAKINDESY-QSIMYIVVVVG- 101 (213)
T ss_dssp CEEEECCCBSS-TTCCEEEEEETTTEEECCCSSSCEEETTTEEEEEGGGTTTCSEEEEEEC----CE-ECCCEEEEECB-
T ss_pred ccEEEeeccCC-CCcEEEEEhhcCCCccccCCCcccccCCccEEEccCChhcCceEEEEEEECCeeE-EEEEEEEEEeC-
Confidence 99999999976 7789999884 5544322 34679999999999999999998753322 22 3333322
Q ss_pred cCCCeeeecCCcc-ccCCCCcEEEEeEEccCCC--CeEEEEECCEE
Q psy12725 72 FDPPVIKESFSDE-TLNPGPNYYFKCIASGNPT--PEISWYLDGKK 114 (119)
Q Consensus 72 ~~~~~~~~~~~~~-~~~~g~~~~l~C~~~~~p~--~~~~W~~~~~~ 114 (119)
..+|.+...+... .+.+|+.+.|.|.+.+.|. +.+.|++++..
T Consensus 102 ~~~p~~~~~~~~~~~v~~G~~v~L~C~~~g~p~~~~~i~W~~~g~~ 147 (213)
T 2x1w_L 102 YRIYDVVLSPSHGIELSVGEKLVLNCTARTELNVGIDFNWEYPSSK 147 (213)
T ss_dssp CCEEEEEEESCSCEEEETTCCEEEEEEEEECTTBCCEEEEECSCSS
T ss_pred CcccceEEcCCCCeEEcCCCCEEEEEEEECCCCCceEEEEEecCCc
Confidence 1234444444433 6789999999999988653 47999998765
No 112
>3vh8_G Killer cell immunoglobulin-like receptor 3DL1; immunoglobulin fold, natural killer cell receptor, immune SY; HET: NAG; 1.80A {Homo sapiens} PDB: 1im9_D
Probab=99.76 E-value=2.1e-17 Score=97.76 Aligned_cols=113 Identities=12% Similarity=0.169 Sum_probs=83.3
Q ss_pred CCccEEEEEEeccCCCCeeEEeeCCccCCCC----------CCCeEEEecCCCCCCeEEEEEEEcCCCCc-----eeEee
Q psy12725 1 MLALKFFTCKYEGNPVKTISWMKDGKPVPDH----------NEPVFRIDSVRKEDKGMYQCVIRNEQESA-----QASGE 65 (119)
Q Consensus 1 ~g~~~~l~c~~~~~~~~~v~w~~~~~~~~~~----------~~~~l~~~~~~~~d~g~y~C~~~~~~~~~-----~~~~~ 65 (119)
.|+.++|.|.+.+ +.+.+.|++++..+... ....|.|..++.+|.|.|.|.+.|..+.. .....
T Consensus 132 ~G~~v~L~C~~~~-~~~~~~w~k~g~~~~~~~~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~a~n~~g~~~~s~~s~~~~ 210 (316)
T 3vh8_G 132 SGERVILQCWSDI-MFEHFFLHKEGISKDPSRLVGQIHDGVSKANFSIGPMMLALAGTYRCYGSVTHTPYQLSAPSDPLD 210 (316)
T ss_dssp TTCCEEEEEEESS-CCSEEEEEETTCCSCCEEEECEEETTEEEEEEEECSCCGGGCEEEEEEEECTTCTTBCCCCCCCEE
T ss_pred CCCeEEEEEcCCC-CCcEEEEEECCCccccceeeeeecCCCceEEEEECCCChhhCceEEEEEecCCCCccccCCCCCEE
Confidence 3899999999954 56789999998766321 23578999999999999999999876532 22334
Q ss_pred EEEeeecCCCeeeecCCccccCCCCcEEEEeEEccCCCCeEEEEECCEEcc
Q psy12725 66 LKLGGRFDPPVIKESFSDETLNPGPNYYFKCIASGNPTPEISWYLDGKKLV 116 (119)
Q Consensus 66 ~~v~~~~~~~~~~~~~~~~~~~~g~~~~l~C~~~~~p~~~~~W~~~~~~~~ 116 (119)
+.+.....+|.+...+. ..+.+|+.+.|.|.+. .+.+.+.|+++|..+.
T Consensus 211 l~V~~~~~~p~i~~~~~-~~v~~G~~v~L~C~~~-~~~~~~~W~k~g~~~~ 259 (316)
T 3vh8_G 211 IVVTGPYEKPSLSAQPG-PKVQAGESVTLSCSSR-SSYDMYHLSREGGAHE 259 (316)
T ss_dssp EEEECSSCCCEEEEESC-SCCCTTSCCEEEEEES-SCCSEEEEEETTSSCC
T ss_pred EEecCCCCCCeEEeCCC-CeecCCCcEEEEEECC-CCCcEEEEEECCCcCC
Confidence 44443334566665543 3678999999999986 4677999999987543
No 113
>2y25_A Myomesin; structural protein, sarcomere, M-BAND, immunoglobulin-like D; 3.50A {Homo sapiens}
Probab=99.76 E-value=3e-19 Score=105.28 Aligned_cols=114 Identities=14% Similarity=0.255 Sum_probs=81.3
Q ss_pred CCccEEEEEEeccC-CCCeeEEeeCCccCCCC-------CCCeEEEecCCCCCCeEEEEEEEcCCCCceeEeeEEEeeec
Q psy12725 1 MLALKFFTCKYEGN-PVKTISWMKDGKPVPDH-------NEPVFRIDSVRKEDKGMYQCVIRNEQESAQASGELKLGGRF 72 (119)
Q Consensus 1 ~g~~~~l~c~~~~~-~~~~v~w~~~~~~~~~~-------~~~~l~~~~~~~~d~g~y~C~~~~~~~~~~~~~~~~v~~~~ 72 (119)
.|+.+.|.|.+.+. |.+.+.|++++..+... ....|.|.+++..|.|.|.|.+.+..+.......+.+.
T Consensus 20 ~G~~v~l~C~~~~~~p~~~v~W~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~~~n~~g~~~~~~~l~v~--- 96 (317)
T 2y25_A 20 GECNVLLKCKVANIKKETHIVWYKDEREISVDEKHDFKDGICTLLITEFSKKDAGIYEVILKDDRGKDKSRLKLVDE--- 96 (317)
T ss_dssp TTTEEEEEEEEESCCTTCEEEEEETTEEECCSCC-----CCEEEEETTCCSTTCSCEEEEEESSSCEEEEEECCSTH---
T ss_pred CCCeEEEEEEEcCCCCCCEEEEEECCeEcCCCCcEEEECCeEEEEEccCCcccCeEEEEEEECCCCcEEEEEEEEEe---
Confidence 48999999999887 77899999999876532 23589999999999999999999886544333322221
Q ss_pred CCCeeeecCCccccCCCCcEEEEeEEcc----------CCCCeEEEEECCEEccc
Q psy12725 73 DPPVIKESFSDETLNPGPNYYFKCIASG----------NPTPEISWYLDGKKLVN 117 (119)
Q Consensus 73 ~~~~~~~~~~~~~~~~g~~~~l~C~~~~----------~p~~~~~W~~~~~~~~~ 117 (119)
.+|.+...+....+..|+.+.+.|.+.+ .|.+.+.|++++..+..
T Consensus 97 ~~~~~~~~~~~~~~~~g~~~~l~c~~~~~~l~c~~~~~~p~~~i~W~~~~~~~~~ 151 (317)
T 2y25_A 97 AFKELMMEVCKKIALSATDLKIQSTAEGIQLYSFVTYYVEDLKVNWSHNGSAIRY 151 (317)
T ss_dssp HHHHHHHHHHHHHHTCBCCCEEEECSSEEEEEEEBSSCCSSCEEEEEESSSBCCC
T ss_pred cCccccccCCceecccCCCeEEEeeccccEEEEEeccCCCCcEEEEEECCEECCC
Confidence 1222222222334567777888887665 67889999999887653
No 114
>3pv7_A B7-H6, IG-like domain-containing protein DKFZP686O24166/DKFZP686I21167; NK cell receptor, receptor-ligand complex, immune system; HET: NAG; 2.00A {Homo sapiens} PDB: 3pv6_A*
Probab=99.76 E-value=1e-17 Score=96.08 Aligned_cols=109 Identities=17% Similarity=0.299 Sum_probs=74.4
Q ss_pred CCccEEEEEEeccCCCCe-----eEEeeCCccCC-----------------C----------CCCCeEEEecCCCCCCeE
Q psy12725 1 MLALKFFTCKYEGNPVKT-----ISWMKDGKPVP-----------------D----------HNEPVFRIDSVRKEDKGM 48 (119)
Q Consensus 1 ~g~~~~l~c~~~~~~~~~-----v~w~~~~~~~~-----------------~----------~~~~~l~~~~~~~~d~g~ 48 (119)
+|+.+.|.|.+.+.|.+. +.|++++.... . ....+|.|.+++..|+|.
T Consensus 17 ~G~~v~L~C~~~g~p~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sL~I~~v~~~D~G~ 96 (248)
T 3pv7_A 17 LNDNVTIFCNIFYSQPLNITSMGITWFWKSLTFDKEVKVFEFFGDHQEAFRPGAIVSPWRLKSGDASLRLPGIQLEEAGE 96 (248)
T ss_dssp TTSCEEECCEEEESSCCCTTSCEEEEEEECSSCCCEEEEEEEESSCEEESSTTCBCCHHHHTTTBCCEEESSCCGGGCEE
T ss_pred CCCCEEEeeEEecCCCcCCCceEEEEEEEcCCCCcceEEEEecCCcccccCCceEEEeccCCCCcEEEEeCCCCHHHCeE
Confidence 489999999998776554 99998632211 0 123459999999999999
Q ss_pred EEEEEEcCCCCceeEeeEEEeeecCCCeeeecCCccccCCCCcEEEEeEEcc-CCCC-eEEEEECCE
Q psy12725 49 YQCVIRNEQESAQASGELKLGGRFDPPVIKESFSDETLNPGPNYYFKCIASG-NPTP-EISWYLDGK 113 (119)
Q Consensus 49 y~C~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~g~~~~l~C~~~~-~p~~-~~~W~~~~~ 113 (119)
|.|.+.+..+.......+.|. .+|.+...+. .....|..+.|.|.+.+ .|.+ .+.|+++|.
T Consensus 97 Y~C~~~~~~~~~~~~~~L~V~---~~P~v~~~~~-~~~~~~~~~~L~C~~~g~~P~pi~v~W~k~g~ 159 (248)
T 3pv7_A 97 YRCEVVVTPLKAQGTVQLEVV---ASPASRLLLD-QVGMKENEDKYMCESSGFYPEAINITWEKQTQ 159 (248)
T ss_dssp EEEEEEETTEEEEEEEEEEEE---BCCEEEEECC---------CEEEEEEEEEBSSCCEEEEEEECS
T ss_pred EEEEEEeCCccceeEEEEEEe---cCCceEEecC-CccccCCCcEEEEEEccEECCCeEEEEEECCc
Confidence 999999875444444444443 3666665544 23456778889999988 6888 999999885
No 115
>4dzb_B Vbeta2 (MAIT T cell receptor); immune system; 1.70A {Homo sapiens} PDB: 1ymm_E* 3o4l_E* 3o6f_D 3t0e_D 1ktk_E 3mfg_B 2ij0_E
Probab=99.76 E-value=6.9e-18 Score=96.67 Aligned_cols=117 Identities=18% Similarity=0.317 Sum_probs=79.8
Q ss_pred CCccEEEEEEeccCCCCeeEEee----------------CCccCCC-------------CCCCeEEEecCCCCCCeEEEE
Q psy12725 1 MLALKFFTCKYEGNPVKTISWMK----------------DGKPVPD-------------HNEPVFRIDSVRKEDKGMYQC 51 (119)
Q Consensus 1 ~g~~~~l~c~~~~~~~~~v~w~~----------------~~~~~~~-------------~~~~~l~~~~~~~~d~g~y~C 51 (119)
.|+.|.|.|.+.+.+.+.+.||| ++..... .....|.|.+++.+|+|.|.|
T Consensus 15 ~G~~v~L~C~~~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~L~I~~v~~~D~G~Y~C 94 (246)
T 4dzb_B 15 SGTSVKIECRSLDFQATTMFWYRQFPKQSLMLMATSNEGSKATYEQGVEKDKFLINHASLTLSTLTVTSAHPEDSSFYIC 94 (246)
T ss_dssp TTSCEEEEEEESSSCCCSEEEEEECTTSCCEEEEEECTTSCCEECTTCCGGGEEEEEEETTEEEEEECSCCGGGCEEEEE
T ss_pred CCCcEEEEeEecCCCceEEEEEEECCCCCcEEEEEEccCCCceecCcccCCcEEEEecCCCEEEEEECCCCHHHCEEEEE
Confidence 48999999999988888999998 2211111 112379999999999999999
Q ss_pred EEEcCCC----CceeEeeEEEee---ecCCCeeeec-CCccccCCCCcEEEEeEEccCCCC--eEEEEECCEEccc
Q psy12725 52 VIRNEQE----SAQASGELKLGG---RFDPPVIKES-FSDETLNPGPNYYFKCIASGNPTP--EISWYLDGKKLVN 117 (119)
Q Consensus 52 ~~~~~~~----~~~~~~~~~v~~---~~~~~~~~~~-~~~~~~~~g~~~~l~C~~~~~p~~--~~~W~~~~~~~~~ 117 (119)
.+.+..+ .......+.+.. ...+|.+... +....+..|+.+.|.|.+.+.+++ .+.|+++|..+..
T Consensus 95 ~~~~~~~~~~~~~~~~~~l~V~~~~~~~~~P~i~~~~~~~~~~~~g~~v~L~C~~~g~~p~~~~v~W~k~g~~l~~ 170 (246)
T 4dzb_B 95 SARTSGDFGEQFFGPGTRLTVLEDLKNVFPPEVAVFEPSEAEISHTQKATLVCLATGFYPDHVELSWWVNGKEVHS 170 (246)
T ss_dssp EECCSSGGGCCEECCCEEEEEESCGGGCBCCEEEEECCCHHHHHHHSEEEEEEEEEEEBSSCEEEEEEETTEEECT
T ss_pred EEecCCCCcceEEcCCEEEEEecCCCcccCCceEeecCCchhccCCCcEEEEEEEccCcCCceEEEEEECCEECCC
Confidence 9986532 111223344432 1124554433 233345568999999999887654 8999999988754
No 116
>1p6f_A NKP46, natural cytotoxicity triggering receptor 1; natural cytotoxicity receptor, NK cell receptor, immunoglobulin fold, immune system; 2.20A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4
Probab=99.76 E-value=9.5e-18 Score=96.26 Aligned_cols=112 Identities=15% Similarity=0.186 Sum_probs=80.2
Q ss_pred CCccEEEEEEeccCCCCeeEEeeCCccCC--------CCCCCeEEEecCCCCCCeEEEEEEEcCCCCce--eEeeEEEee
Q psy12725 1 MLALKFFTCKYEGNPVKTISWMKDGKPVP--------DHNEPVFRIDSVRKEDKGMYQCVIRNEQESAQ--ASGELKLGG 70 (119)
Q Consensus 1 ~g~~~~l~c~~~~~~~~~v~w~~~~~~~~--------~~~~~~l~~~~~~~~d~g~y~C~~~~~~~~~~--~~~~~~v~~ 70 (119)
.|+.|+|.|.+.+ +...+.|||++..+. ......|.|.+++..|.|.|.|.+.+..+... ....+.|..
T Consensus 20 ~G~~VtL~C~~~~-~~~~~~w~k~g~~~~~~~~~~~~~~~~~~L~I~~v~~~DsG~Y~C~~~~~~~~s~~S~~~~L~V~~ 98 (242)
T 1p6f_A 20 KEKQVTICCQGNY-GAVEYQLHFEGSLFAVDRPKPPERINKVKFYIPDMNSRMAGQYSCIYRVGELWSEPSNLLDLVVTE 98 (242)
T ss_dssp TTCCEEEEEECCT-TCCEEEEEETTEEEEEECCSSCTTCCEEEEEECSCCGGGCEEEEEEEEETTEECCCCCCEEEEEEC
T ss_pred CCCcEEEEEeeCC-CCcEEEEEECCCccccccccccCCcceeEEEecCCCcccCeEEEEEEecCCccccCCcceEEEeec
Confidence 4899999999875 456899999987542 12346799999999999999999977532212 223444433
Q ss_pred ecCCCeeeecCCccccCCCCcEEEEeEEccCCCCeEEEEECCEEc
Q psy12725 71 RFDPPVIKESFSDETLNPGPNYYFKCIASGNPTPEISWYLDGKKL 115 (119)
Q Consensus 71 ~~~~~~~~~~~~~~~~~~g~~~~l~C~~~~~p~~~~~W~~~~~~~ 115 (119)
...+|.+...+ ...+.+|+.++|.|.+.+. .+.+.|+|+|..+
T Consensus 99 ~~~~P~i~~~p-~~~v~~G~~vtL~C~~~~~-~~~~~w~k~g~~~ 141 (242)
T 1p6f_A 99 MYDTPTLSVHP-GPEVISGEKVTFYCRLDTA-TSMFLLLKEGRSS 141 (242)
T ss_dssp CSCCCEEEEES-CSEEETTCEEEEEEECTTS-CSEEEEEECSSSC
T ss_pred ccCCCceEccC-CCccCCCCcEEEEEecCCC-CCEEEEEECCCcc
Confidence 33456666544 3457899999999998654 4589999998654
No 117
>2j6e_L IGM, FAB light chain; autoimmune complex human IGM rheumatoid factor IGG1-FC, immunoglobulin C region, membrane, glycoprotein, transmembrane; HET: NAG FUL BMA MAN NDG GAL; 3.0A {Homo sapiens} SCOP: b.1.1.1 b.1.1.2
Probab=99.76 E-value=3.6e-18 Score=97.10 Aligned_cols=117 Identities=15% Similarity=0.219 Sum_probs=77.3
Q ss_pred CCccEEEEEEeccCC-CC-eeEEeeCC--ccC----------C--CC---------CCCeEEEecCCCCCCeEEEEEEEc
Q psy12725 1 MLALKFFTCKYEGNP-VK-TISWMKDG--KPV----------P--DH---------NEPVFRIDSVRKEDKGMYQCVIRN 55 (119)
Q Consensus 1 ~g~~~~l~c~~~~~~-~~-~v~w~~~~--~~~----------~--~~---------~~~~l~~~~~~~~d~g~y~C~~~~ 55 (119)
.|+.|+|.|.+.+.+ .+ .+.|||++ ..+ . .. ....|.|.+++.+|+|.|.|.+.+
T Consensus 33 ~G~~v~L~C~~~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~D~G~Y~C~~~~ 112 (234)
T 2j6e_L 33 PGQRVTISCSGSSSNIGSNYVYWYQQLPGTAPKLLIYRNNQRPSGVPDRFSGSKSGTSASLAISGLRSEDEADYYCATWD 112 (234)
T ss_dssp TTCEEEEEEECCTTTTTTSCCEEEEECSSSCCEEEEBTTTBCCSSSCTTEEEEEETTEEEEEEESCCSTTCSEEEEEEEE
T ss_pred CCCcEEEEEEecCCCCCCCeEEEEEecCCCCcEEEEECccccCCCccccEEEEecCCeEEEEECCCCHHHCEEEEEEEEc
Confidence 489999999998754 34 69999863 211 0 00 123799999999999999999998
Q ss_pred CCCC---ceeEeeEEEeee-cCCCeeeecCCccccCCCCcEEEEeEEccCCC--CeEEEEECCEEccc
Q psy12725 56 EQES---AQASGELKLGGR-FDPPVIKESFSDETLNPGPNYYFKCIASGNPT--PEISWYLDGKKLVN 117 (119)
Q Consensus 56 ~~~~---~~~~~~~~v~~~-~~~~~~~~~~~~~~~~~g~~~~l~C~~~~~p~--~~~~W~~~~~~~~~ 117 (119)
..+. ......+.|... ..+|.+...+.......|+.+.|.|.+.+.++ +.+.|+++|..+..
T Consensus 113 ~~~~~~~~~~~~~l~V~~~~~~~p~v~~~~~~~~~~~g~~v~L~C~~~g~~p~~~~v~W~k~g~~l~~ 180 (234)
T 2j6e_L 113 DSLSAVIFGGGTKLTVLGQPKAAPSVTLFPPSSEELQANKATLVCLISDFFPGAVTVAWKADGAPVKA 180 (234)
T ss_dssp TTTTEEEECCCBCCCBCCCCCCCCCCCEECCCHHHHTTSCCCEEECCCBCSSCCCEEEEEETTEECCS
T ss_pred CCcceeEecCCEEEEEecCCCCCCcccccCCChhHhcCCceEEEEEEEEEcCCceEEEEEECCEECCC
Confidence 7652 111233333211 13455554333323345889999999988643 38999999998753
No 118
>2ec8_A MAST/stem cell growth factor receptor; glycoprotein, receptor tyrosine kinase, growth factor cytoki dimerization, transferase; HET: NAG; 3.00A {Homo sapiens} PDB: 2e9w_A*
Probab=99.76 E-value=2.7e-18 Score=107.45 Aligned_cols=106 Identities=20% Similarity=0.350 Sum_probs=81.4
Q ss_pred CCccEEEEEEeccCCCCe-eEEeeCCccCCCCC--------------CCeEEEecCCCCCCeEEEEEEEcCCCCceeEee
Q psy12725 1 MLALKFFTCKYEGNPVKT-ISWMKDGKPVPDHN--------------EPVFRIDSVRKEDKGMYQCVIRNEQESAQASGE 65 (119)
Q Consensus 1 ~g~~~~l~c~~~~~~~~~-v~w~~~~~~~~~~~--------------~~~l~~~~~~~~d~g~y~C~~~~~~~~~~~~~~ 65 (119)
.|+.+.|.|.+.+.|.+. +.|++++..+.... ...|.|.+++.+|.|.|+|.+.|..+.......
T Consensus 327 ~G~~v~l~C~~~g~P~p~~v~W~k~g~~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~N~~g~~~~~~~ 406 (524)
T 2ec8_A 327 DGENVDLIVEYEAFPKPEHQQWIYMNRTFTDKWEDYPKSENESNIRYVSELHLTRLKGTEGGTYTFLVSNSDVNAAIAFN 406 (524)
T ss_dssp TTCCEEEEEEEEEESCCCEEEEESSSCBCSSSBCCEESCCSSSCCEEEEEEEECSCCGGGCEEEEEEEECSSCEEEEEEE
T ss_pred CCCcEEEEEEEeecCCCcEEEEEECCeeccCCccceeEEccCCCceeEEEEEEeecCcccCeEEEEEEEecCceEEEEEE
Confidence 488999999999999888 99999988765432 247999999999999999999999877655555
Q ss_pred EEEeeecCCCeeeecCCccccCCCCcEEEEeEEccCCCCeEEEEECCEEc
Q psy12725 66 LKLGGRFDPPVIKESFSDETLNPGPNYYFKCIASGNPTPEISWYLDGKKL 115 (119)
Q Consensus 66 ~~v~~~~~~~~~~~~~~~~~~~~g~~~~l~C~~~~~p~~~~~W~~~~~~~ 115 (119)
+.+. .+|.+...+. ..+| .|.|.+.|.|.|.+.|++++..+
T Consensus 407 l~V~---~~P~i~~~~~---~~~g---~l~C~~~g~P~p~i~W~~~~~~~ 447 (524)
T 2ec8_A 407 VYVN---TKPEILTYDR---LVNG---MLQCVAAGFPEPTIDWYFCPGTE 447 (524)
T ss_dssp EEEC---EEEEEEEEEC---CSSS---CEEEEEEEESCCEEECCCC----
T ss_pred EEEe---cCCeEeeccc---CcCc---EEEEEEEeecCCEEEEEECCCcc
Confidence 5553 3565554432 3445 99999999999999999997654
No 119
>3qs9_E FL cytokine receptor; immunoglobulin-like domain, four-helical bundle cytokine, hematopoietic cytokine-receptor complex, cell surface, EXTR complex; 7.80A {Homo sapiens}
Probab=99.76 E-value=6.4e-18 Score=106.18 Aligned_cols=103 Identities=18% Similarity=0.270 Sum_probs=77.3
Q ss_pred CCccEEEEEEeccCCCCeeEEeeCCccCCCC-----CCCeEEEecCCCCCCeEEEEEEEcCCCCceeEeeEEEeeecCCC
Q psy12725 1 MLALKFFTCKYEGNPVKTISWMKDGKPVPDH-----NEPVFRIDSVRKEDKGMYQCVIRNEQESAQASGELKLGGRFDPP 75 (119)
Q Consensus 1 ~g~~~~l~c~~~~~~~~~v~w~~~~~~~~~~-----~~~~l~~~~~~~~d~g~y~C~~~~~~~~~~~~~~~~v~~~~~~~ 75 (119)
.|+.+.|.|.+.+.|.+.+.|+|++..+... ....|.|..++.+|.|.|+|.+.|..+.......+.|. .+|
T Consensus 340 ~G~~v~L~C~~~g~P~p~i~W~k~g~~l~~~~~~~~~~~~L~I~~v~~~D~G~YtC~A~N~~g~~~~~~~L~V~---~~P 416 (527)
T 3qs9_E 340 QYEEFCFSVRFKAYPQIRCTWTFSRKSFPCEQKGLDNGYSISKFCNHKHQPGEYIFHAENDDAQFTKMFTLNIR---RKP 416 (527)
T ss_dssp TTCCCCEEEEEEEESCCEEEEEETTEEEECBCCBCSSSSEEEEECCCTTCCSCEEEEEEETTEEEEEEEEEC-----CCC
T ss_pred CCCeEEEEEEEEecCCCEEEEEECCEECcCCcccccCCcEEEEecCCcccCEEEEEEEEeCCCcEEEEEEEEEe---cCC
Confidence 3888999999999999999999999877432 35689999999999999999999987665555444443 467
Q ss_pred eeeecCCccccCCCCcEEEEeEEccCCCCeEEEEECCEE
Q psy12725 76 VIKESFSDETLNPGPNYYFKCIASGNPTPEISWYLDGKK 114 (119)
Q Consensus 76 ~~~~~~~~~~~~~g~~~~l~C~~~~~p~~~~~W~~~~~~ 114 (119)
.+...+. ...|.|.+.|.|.|.+.|++++..
T Consensus 417 ~i~~~~~--------~~~l~C~a~g~P~p~i~W~~~~~~ 447 (527)
T 3qs9_E 417 QVLAEAS--------ASQASCFSDGYPLPSWTWKKCSDK 447 (527)
T ss_dssp EEEECCC--------CE---EEEECSSCCEEEEECCC--
T ss_pred eEEEeCC--------CCEEEEEEEEEcCCeEEEEECCCC
Confidence 7665432 235799999999999999987543
No 120
>1ccz_A Protein (CD58); LFA-3, glycoprotein; HET: NAG; 1.80A {Homo sapiens} SCOP: b.1.1.1 b.1.1.3 PDB: 1ci5_A 1qa9_B
Probab=99.76 E-value=1.5e-17 Score=90.90 Aligned_cols=105 Identities=18% Similarity=0.200 Sum_probs=76.5
Q ss_pred CCccEEEEEEeccCCCCeeEEeeCCccCC-------------------CCCCCeEEEecCCCCCCeEEEEEEEcCCCCce
Q psy12725 1 MLALKFFTCKYEGNPVKTISWMKDGKPVP-------------------DHNEPVFRIDSVRKEDKGMYQCVIRNEQESAQ 61 (119)
Q Consensus 1 ~g~~~~l~c~~~~~~~~~v~w~~~~~~~~-------------------~~~~~~l~~~~~~~~d~g~y~C~~~~~~~~~~ 61 (119)
+|+.|+|.|.+.. |.+.|.|++++..+. ...+.+|.|.+++..|+|.|.|.+.+..+ .
T Consensus 9 ~G~~VtL~c~~~~-~~~~i~W~~~~~~i~~~~~~~~~~~~~~~~R~~~~~~~~sL~I~~v~~~DsG~Y~C~~~n~~~--~ 85 (171)
T 1ccz_A 9 VYGNVTFHVPSNV-PLKEVLWKKQKDKVAELENSEFRAFSSFKNRVYLDTVSGSLTIYNLTSSDEDEYEMESPNITD--T 85 (171)
T ss_dssp TTCCEEECCCCSS-CCSCEEEEETTEEEEEEETTEEEECGGGTTSEEECTTTCCEEECSCCGGGCEEEEEECTTCCS--C
T ss_pred cCCCEEEcCCCCC-CcceEEEEeCCcEEEEEcCCCcccccccCCcEEEeCCCCeEEECCCChhhCceEEEEEeCCCC--c
Confidence 4899999999854 788999998764210 01346899999999999999999988765 4
Q ss_pred eEeeEEEeeecCCCeeeecCCccccCCCCcEEEEeEEccCCCCeEEEEECCEEcc
Q psy12725 62 ASGELKLGGRFDPPVIKESFSDETLNPGPNYYFKCIASGNPTPEISWYLDGKKLV 116 (119)
Q Consensus 62 ~~~~~~v~~~~~~~~~~~~~~~~~~~~g~~~~l~C~~~~~p~~~~~W~~~~~~~~ 116 (119)
..+.+.|......|.+...... ..|.|.+.+.|.|.+.|++++..+.
T Consensus 86 ~~~~L~V~~~~~~p~i~~~~~~--------~~L~C~~~~~p~p~i~W~~~~~~l~ 132 (171)
T 1ccz_A 86 MKFFLYVLEMVSKPMIYWECSN--------ATLTCEVLEGTDVELKLYQGKEHLR 132 (171)
T ss_dssp EEEEEEEECCCCCCEEEEETTT--------TEEEEECSSCSSCEEEEEETTEEEE
T ss_pred EEEEEEEECcCCCCEEEEecCC--------cEEEEEeCCCCCcEEEEEECCEECc
Confidence 4555555433233444332211 2799999888889999999998764
No 121
>3vh8_G Killer cell immunoglobulin-like receptor 3DL1; immunoglobulin fold, natural killer cell receptor, immune SY; HET: NAG; 1.80A {Homo sapiens} PDB: 1im9_D
Probab=99.76 E-value=2.3e-17 Score=97.55 Aligned_cols=112 Identities=12% Similarity=0.175 Sum_probs=81.8
Q ss_pred CCccEEEEEEeccCCCCeeEEeeCCccCCC-----CCCCeEEEecCCCCCCeEEEEEEEcCCC-----CceeEeeEEEee
Q psy12725 1 MLALKFFTCKYEGNPVKTISWMKDGKPVPD-----HNEPVFRIDSVRKEDKGMYQCVIRNEQE-----SAQASGELKLGG 70 (119)
Q Consensus 1 ~g~~~~l~c~~~~~~~~~v~w~~~~~~~~~-----~~~~~l~~~~~~~~d~g~y~C~~~~~~~-----~~~~~~~~~v~~ 70 (119)
.|+.++|.|.+.+. .+.+.|+|++..+.. .....|.|.+++.+|.|.|.|.+.+... .......+.+..
T Consensus 37 ~G~~v~L~C~~~~~-~~~~~W~k~g~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~~~~~~~~~~~~s~~~~l~V~~ 115 (316)
T 3vh8_G 37 RGGHVTLRCHYRHR-FNNFMLYKEDRIHIPIFHGRIFQESFNMSPVTTAHAGNYTCRGSHPHSPTGWSAPSNPVVIMVTG 115 (316)
T ss_dssp TTSCEEEEEEBTTB-CCSEEEEESSCSSSCHHHHCCBSSCEEECSCCGGGCEEEEEEEBCSSSSSSBCCCCCCEEEEEEC
T ss_pred CCCCEEEEEEccCC-CceEEEEeCCCccceeecCCcceEEEEECCCCcccCeEEEEEEEcCCCCcceecCCCcEEEEEec
Confidence 48999999999886 678999999877543 2467899999999999999999986422 112233444433
Q ss_pred ecCCCeeeecCCccccCCCCcEEEEeEEccCCCCeEEEEECCEEc
Q psy12725 71 RFDPPVIKESFSDETLNPGPNYYFKCIASGNPTPEISWYLDGKKL 115 (119)
Q Consensus 71 ~~~~~~~~~~~~~~~~~~g~~~~l~C~~~~~p~~~~~W~~~~~~~ 115 (119)
...+|.+...+.. .+.+|+.+.|.|.+. .+.+.+.|++++..+
T Consensus 116 ~~~~p~~~~~~~~-~v~~G~~v~L~C~~~-~~~~~~~w~k~g~~~ 158 (316)
T 3vh8_G 116 NHRKPSLLAHPGP-LVKSGERVILQCWSD-IMFEHFFLHKEGISK 158 (316)
T ss_dssp SSCCCEEEEESCS-EEETTCCEEEEEEES-SCCSEEEEEETTCCS
T ss_pred CCCCCeEEecCCC-ccCCCCeEEEEEcCC-CCCcEEEEEECCCcc
Confidence 2335666554443 378999999999984 456689999998765
No 122
>2o26_X MAST/stem cell growth factor receptor; stem cell factor, receptor tyrosine kinase, class III, recep ligand complex, cytokine, 4-helix bundle; HET: NAG FUL MAN NDG; 2.50A {Mus musculus}
Probab=99.76 E-value=1.5e-17 Score=97.19 Aligned_cols=113 Identities=17% Similarity=0.260 Sum_probs=86.1
Q ss_pred CCccEEEEEEeccCCC-CeeEEe-eCCccCCCC------CCCeEEEecCCCCCCe-EEEEEEEcCCCCcee-EeeEEEee
Q psy12725 1 MLALKFFTCKYEGNPV-KTISWM-KDGKPVPDH------NEPVFRIDSVRKEDKG-MYQCVIRNEQESAQA-SGELKLGG 70 (119)
Q Consensus 1 ~g~~~~l~c~~~~~~~-~~v~w~-~~~~~~~~~------~~~~l~~~~~~~~d~g-~y~C~~~~~~~~~~~-~~~~~v~~ 70 (119)
.|+.+.|.|.+.+ |. +.+.|+ +++..+... ....|.|.+++..|.| .|.|.+.+..+.... ...+.+..
T Consensus 105 ~g~~v~l~C~~~~-p~~~~v~W~~~~g~~l~~~~~~~~~~~~~L~i~~v~~~d~G~~Y~C~a~n~~~~~~s~~~~l~V~~ 183 (290)
T 2o26_X 105 EDSDALVRCPLTD-PQVSQYSLIECDGKSLPTDLTFVPNPKAGITIKNVKRAYHRLCVRCAAQRDGTWLHSDKFTLKVRE 183 (290)
T ss_dssp TTSCEEECCCBSC-CSCEEEEEEETTSCCCCTTCEEEEETTTEEEEESCCGGGTTCEEEEEEEETTEEEECCCEEEEEEC
T ss_pred cCCeEEEeCcCCC-CCCceEEEEeCCCcCCCCCCceeeCCCCCEEEecccHHHCCCEEEEEEEECCceEEeEEEEEEEEe
Confidence 3889999999986 77 899995 577766432 3468999999999999 999999997432211 23444431
Q ss_pred -ecCCCeeeecCCccccCCCCcEEEEeEEccCCCCe-EEEEECCEE
Q psy12725 71 -RFDPPVIKESFSDETLNPGPNYYFKCIASGNPTPE-ISWYLDGKK 114 (119)
Q Consensus 71 -~~~~~~~~~~~~~~~~~~g~~~~l~C~~~~~p~~~-~~W~~~~~~ 114 (119)
...+|.+...+....+..|+.+.|.|.+.+.|.|. +.|++++..
T Consensus 184 ~~~~~P~i~~~~~~~~v~~G~~v~l~C~~~g~p~p~~i~W~~~~~~ 229 (290)
T 2o26_X 184 AIKAIPVVSVPETSHLLKKGDTFTVVCTIKDVSTSVNSMWLKMNPQ 229 (290)
T ss_dssp CCCSCCEEECSCSBCCCCTTCCEEEEEEEEESSTTCEEEEEEESSS
T ss_pred CCCCCCccccCCCcceEecCCcEEEEEEEecCCcceeEEEecCCCC
Confidence 12577777666666888999999999999999886 999998865
No 123
>1q9r_B S25-2 FAB (IGG1K) heavy chain; antigen-binding fragment, anti-carbohydrate, anti-LPS, antibody, immunoglobulin, KDO, complex, immune system; HET: KDA KDO; 1.45A {Mus musculus} SCOP: b.1.1.1 b.1.1.2 PDB: 1q9l_B 1q9k_B* 1q9q_B* 1q9v_B* 2r1w_B* 2r1x_B* 2r1y_B* 2r2b_B* 2r2e_B* 2r2h_B* 3bpc_B* 3sy0_B* 3t4y_B* 3t65_B* 2r23_B* 1q9t_B* 3t77_B* 3okl_B* 3okk_B* 3okm_B ...
Probab=99.76 E-value=9.7e-18 Score=94.80 Aligned_cols=115 Identities=15% Similarity=0.306 Sum_probs=79.6
Q ss_pred CCccEEEEEEeccCC--CCeeEEeeCC--ccC---------------------CC---------CCCCeEEEecCCCCCC
Q psy12725 1 MLALKFFTCKYEGNP--VKTISWMKDG--KPV---------------------PD---------HNEPVFRIDSVRKEDK 46 (119)
Q Consensus 1 ~g~~~~l~c~~~~~~--~~~v~w~~~~--~~~---------------------~~---------~~~~~l~~~~~~~~d~ 46 (119)
.|+.++|.|.+.+.+ .+.+.|||.. ... .. .....|.|.+++.+|+
T Consensus 14 ~G~~v~L~C~~~~~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~~L~I~~v~~~D~ 93 (222)
T 1q9r_B 14 SGGSLRLSCATSGFTFTDYYMSWVRQPPGKALEWLGFIRNKANGYTTEYSPSVKGRFTISRDNSQSILYLQMNTLRAEDS 93 (222)
T ss_dssp TTCCEEEEEEEESSCGGGSCEEEEEECTTSCCEEEEEECCGGGTTCEEECTTTBTTEEEEEETTTTEEEEEECSCCGGGC
T ss_pred CCCEEEEEEEecCccCCCCcEEEEEECCCCCcEEEEEEccCCcccccccCcccCCceEEEEECCCCeEEEEECcCCcccC
Confidence 489999999998754 6789999843 110 00 0123799999999999
Q ss_pred eEEEEEEEcCCC-----CceeEeeEEEeee-cCCCeeeecCCccccCCCCcEEEEeEEccC-CCC-eEEEEECCEEc
Q psy12725 47 GMYQCVIRNEQE-----SAQASGELKLGGR-FDPPVIKESFSDETLNPGPNYYFKCIASGN-PTP-EISWYLDGKKL 115 (119)
Q Consensus 47 g~y~C~~~~~~~-----~~~~~~~~~v~~~-~~~~~~~~~~~~~~~~~g~~~~l~C~~~~~-p~~-~~~W~~~~~~~ 115 (119)
|.|.|.+.+..+ .......+.+... ..+|.+...+....+..|+.+.|.|.+.+. |.| .+.|+++|..+
T Consensus 94 G~Y~C~~~~~~~~~~~~~~~~~~~l~V~~~~~~~P~i~~~~~~~~~~~g~~v~L~C~~~g~~P~p~~v~W~~~g~~~ 170 (222)
T 1q9r_B 94 ATYYCARDHDGYYERFSYWGQGTLVTVSAAKTTPPSVYPLAPGSAAQTNSMVTLGCLVKGYFPEPVTVTWNSGSLSS 170 (222)
T ss_dssp EEEEEEECCCSSCCSCCCBCCCEEEEECSSCCBCCEEEEECCCSCCCCSSEEEEEEEEEEEBSSCCEEEEGGGTBCT
T ss_pred eEEEEEEeccCCcccceEeCCceEEEeccCCCCCCeEEEccccccccCCCcEEEEEEEccEECCCCEEEEecCCeEc
Confidence 999999988643 1222344554421 124555544433346689999999999885 877 99999998654
No 124
>3dmk_A DOWN syndrome cell adhesion molecule (dscam) ISOF 1.30.30, N-terminal eight IG domains...; immunoglobulin domain; HET: NAG NDG; 4.19A {Drosophila melanogaster}
Probab=99.76 E-value=4.1e-17 Score=106.55 Aligned_cols=113 Identities=27% Similarity=0.552 Sum_probs=89.0
Q ss_pred CCccEEEEEEeccCCCCeeEEeeCCccCCCCCC--------------CeEEEecCCCCCCeEEEEEEEcCCCCceeEeeE
Q psy12725 1 MLALKFFTCKYEGNPVKTISWMKDGKPVPDHNE--------------PVFRIDSVRKEDKGMYQCVIRNEQESAQASGEL 66 (119)
Q Consensus 1 ~g~~~~l~c~~~~~~~~~v~w~~~~~~~~~~~~--------------~~l~~~~~~~~d~g~y~C~~~~~~~~~~~~~~~ 66 (119)
.|+.+.|.|.+.+.|.+.+.|++++..+..... ..|.|..++..|.|.|.|.+.|..+.......+
T Consensus 443 ~G~~v~L~C~~~g~p~p~v~W~~~g~~l~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~n~~g~~~~~~~l 522 (816)
T 3dmk_A 443 PGPSVFLKCVAGGNPTPEISWELDGKKIANNDRYQVGQYVTVNGDVVSYLNITSVHANDGGLYKCIAKSKVGVAEHSAKL 522 (816)
T ss_dssp SSSCEEEEEEEECSSCCEEEEEETTEECCSCTTEEEEEEECTTSCEEEEEEESSCCTTTCEEEEEEEEETTEEEEEEEEE
T ss_pred CCCCEEEEEEEecCCCCEEEEEECCEECCCCCCcccccEEecCCCcEEEEEEeeccccCCEEEEEEEEECCCeEEEEEEE
Confidence 388999999999999999999999887643221 258899999999999999999987665555555
Q ss_pred EEeeecCCCeeeecCCccccCCCCcEEEEeEEccCCCCeEEEEECCEEccc
Q psy12725 67 KLGGRFDPPVIKESFSDETLNPGPNYYFKCIASGNPTPEISWYLDGKKLVN 117 (119)
Q Consensus 67 ~v~~~~~~~~~~~~~~~~~~~~g~~~~l~C~~~~~p~~~~~W~~~~~~~~~ 117 (119)
.+. .+|.+.. .....+..|+.+.|.|.+.+.|.+.+.|++++..+..
T Consensus 523 ~V~---~~p~~~~-~~~~~v~~G~~v~l~C~~~g~p~~~i~W~k~~~~l~~ 569 (816)
T 3dmk_A 523 NVY---GLPYIRQ-MEKKAIVAGETLIVTCPVAGYPIDSIVWERDNRALPI 569 (816)
T ss_dssp EEC---SSCEECC-CCCEEEETTCCEEEECCEECSSEEEEEEEETTEESCC
T ss_pred EEe---cCCeeEc-cCCeEEecCCeEEEEEEecCCCCCEEEEEECCeEccc
Confidence 553 3454432 3344577899999999999988889999999988753
No 125
>2y23_A Myomesin; structural protein, sarcomere, M-BAND, immunoglobulin- like; 2.50A {Homo sapiens}
Probab=99.75 E-value=9.1e-18 Score=98.79 Aligned_cols=115 Identities=15% Similarity=0.204 Sum_probs=84.6
Q ss_pred CccEEEEEEec-cCCCCeeEEeeCCccCCCC---------CCCeEEEecCCCCCCeEEEEEEEcCCCCceeEeeEEEeee
Q psy12725 2 LALKFFTCKYE-GNPVKTISWMKDGKPVPDH---------NEPVFRIDSVRKEDKGMYQCVIRNEQESAQASGELKLGGR 71 (119)
Q Consensus 2 g~~~~l~c~~~-~~~~~~v~w~~~~~~~~~~---------~~~~l~~~~~~~~d~g~y~C~~~~~~~~~~~~~~~~v~~~ 71 (119)
|+.+.|.|... +.|.+.+.|+|++..+... ....|.|.+++..|.|.|.|.+.+..+... +..+.+...
T Consensus 16 g~~v~l~~~~~~~~p~~~v~W~k~~~~i~~~~~~~~~~~~~~~~L~I~~~~~~D~G~Y~C~~~n~~g~~~-s~~l~v~~~ 94 (312)
T 2y23_A 16 DGVISLNFECDKMTPKSEFSWSKDYVSTEDSPRLEVESKGNKTKMTFKDLGMDDLGIYSCDVTDTDGIAS-SYLIDEEEL 94 (312)
T ss_dssp TCCEEEEEECSSCCTTCCEEEEETTEECTTCTTEEEEEETTEEEEEESSCCGGGCEEEEEEESSSCCCCE-EEEECHHHH
T ss_pred CCeEEEEEEEeCCCCCcEEEEEECCEECCCCCCEEEEEeCCEEEEEECcCCccCCEEEEEEEEeCCCcEE-EEEEEEeee
Confidence 78888888886 4588899999999887532 125799999999999999999998765332 333332110
Q ss_pred c---------CCCeeeecCC-ccccCCCCcEEEEeEEc-cCCCCeEEEEECCEEccc
Q psy12725 72 F---------DPPVIKESFS-DETLNPGPNYYFKCIAS-GNPTPEISWYLDGKKLVN 117 (119)
Q Consensus 72 ~---------~~~~~~~~~~-~~~~~~g~~~~l~C~~~-~~p~~~~~W~~~~~~~~~ 117 (119)
. .+|.+...+. ...+.+|+.+.|.|.+. +.|.+.+.|++++..+..
T Consensus 95 ~~~~~~~~~~~~p~~~~~~~~~~~v~~G~~v~l~C~~~~~~p~~~v~W~~~~~~i~~ 151 (312)
T 2y23_A 95 KRLLALSHEHKFPTVPVKSELAVEILEKGQVRFWMQAEKLSGNAKVNYIFNEKEIFE 151 (312)
T ss_dssp HHHHHHHHHHHSCBCCEEEEEEEEECSSSCEEEEEEESCCCSSCEEEEEETTEEECS
T ss_pred eeeecccccCCCCccccccCCceEEeeCCCEEEEEEEEeCCCCCEEEEEECCEECee
Confidence 0 0344333332 55678999999999998 788899999999988764
No 126
>2p1y_A Bispecific alpha/beta TCR; autoimmunity, immunoglobulin fold, diabody, immune system; 2.42A {Mus musculus} PDB: 1bwm_A
Probab=99.75 E-value=4e-17 Score=93.06 Aligned_cols=109 Identities=13% Similarity=0.277 Sum_probs=75.1
Q ss_pred CCccEEEEEEeccCCCCeeEEeeCC--cc-----------------CC--------CCCCCeEEEecCCCCCCeEEEEEE
Q psy12725 1 MLALKFFTCKYEGNPVKTISWMKDG--KP-----------------VP--------DHNEPVFRIDSVRKEDKGMYQCVI 53 (119)
Q Consensus 1 ~g~~~~l~c~~~~~~~~~v~w~~~~--~~-----------------~~--------~~~~~~l~~~~~~~~d~g~y~C~~ 53 (119)
.|+.|+|.|. .+.+.+.+.|+|+. .. .. ......|.|.+++.+|+|.|.|.+
T Consensus 14 ~G~~v~L~C~-~~~~~~~i~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~L~I~~v~~~DsG~Y~C~~ 92 (238)
T 2p1y_A 14 TGGKVTLSCN-QTNNHNNMYWYRQDTGHGLRLIHYSYGAGSTEKGDIPDGYKASRPSQENFSLILELATPSQTSVYFCAS 92 (238)
T ss_dssp TTCCEEEEEE-ECSCCSEEEEEEEETTTEEEEEEEESSTTCCEECSSCTTCEEECCSSSBCEEEESSCCGGGCEEEEEEE
T ss_pred CCCEEEEEee-cCCCCccEEEEEECCCCCcEEEEEEecCcceeCCCccceEEEEccCCceEEEEEecCCcccCeeEEEEE
Confidence 4899999999 67788999999851 10 00 012357999999999999999999
Q ss_pred EcCCCC---ce--eEeeEEEeeecCCC-----------eeeecCCccccCCCCcEEEEeEEccCCCCeEEEEECC
Q psy12725 54 RNEQES---AQ--ASGELKLGGRFDPP-----------VIKESFSDETLNPGPNYYFKCIASGNPTPEISWYLDG 112 (119)
Q Consensus 54 ~~~~~~---~~--~~~~~~v~~~~~~~-----------~~~~~~~~~~~~~g~~~~l~C~~~~~p~~~~~W~~~~ 112 (119)
.+..+. .. ....+.+.. .++ .+...+....+.+|+.+.|.|.+.+.|.+.+.|++++
T Consensus 93 ~~~~g~~~~~~~~~~~~l~V~~--~~~~~~p~~~~~~~~v~~~p~~~~v~~G~~v~L~C~~~~~p~~~i~W~k~~ 165 (238)
T 2p1y_A 93 GDLGQTNERLFFGHGTKLSVLG--SADDAKKDAAKKDGQVRQSPQSLTVWEGETAILNCSYENSAFDYFPWYQQF 165 (238)
T ss_dssp EC------CEEECCCEEEEEEC--CCHHHHHHHHHHHTCCEEECSEEEEETTSCEEEEEECCCTTCCEEEEEEEC
T ss_pred EeCCCccccceeCCCeEEEEec--cCCCCcCCcccceeeEEccCceEEEeCCCeEEEEEEEecCCCCcEEEEEEC
Confidence 986431 11 122333322 222 3444455556789999999999999888999999853
No 127
>4dep_C Interleukin-1 receptor accessory protein; B-trefoil, immunoglobulin, immune system, extracellular; HET: NAG; 3.10A {Homo sapiens} PDB: 3o4o_B*
Probab=99.75 E-value=1.1e-17 Score=100.02 Aligned_cols=115 Identities=16% Similarity=0.222 Sum_probs=83.3
Q ss_pred CCccEEEEEEeccCCC-----------CeeEEeeCCccCC----C----------CCCCeEEEecCCCCCCeEEEEEEEc
Q psy12725 1 MLALKFFTCKYEGNPV-----------KTISWMKDGKPVP----D----------HNEPVFRIDSVRKEDKGMYQCVIRN 55 (119)
Q Consensus 1 ~g~~~~l~c~~~~~~~-----------~~v~w~~~~~~~~----~----------~~~~~l~~~~~~~~d~g~y~C~~~~ 55 (119)
.|+.+.|.|.+.+.|. +.+.|++++.... . .....|.|.+++..|.|.|.|.+.+
T Consensus 21 ~G~~v~L~C~~~~~p~~~~ys~~~~~~~~i~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~D~G~Y~C~a~n 100 (349)
T 4dep_C 21 EDEPARIKCPLFEHFLKFNYSTAHSAGLTLIWYWTRQDRDLEEPINFRLPENRISKEKDVLWFRPTLLNDTGNYTCMLRN 100 (349)
T ss_dssp TTSCEEEECTCCCCCSSSCHHHHHHTTCEEEEEEEESSCCCEEECCCCCGGGCEEEETTEEEESSCCGGGCEEEEEEEEC
T ss_pred cCCeEEEEccccccccccccccccCCCceEEEEECCCCCcccccccccccCceEeecCCEEEEccCChhhCEEEEEEEec
Confidence 4899999999987553 8999999874211 0 1246799999999999999999999
Q ss_pred CCCCceeEeeEEEeeecCCCeee---ecCCccccCCCCcEEEEeEE-----ccCCCCeEEEEECCEEccc
Q psy12725 56 EQESAQASGELKLGGRFDPPVIK---ESFSDETLNPGPNYYFKCIA-----SGNPTPEISWYLDGKKLVN 117 (119)
Q Consensus 56 ~~~~~~~~~~~~v~~~~~~~~~~---~~~~~~~~~~g~~~~l~C~~-----~~~p~~~~~W~~~~~~~~~ 117 (119)
..+.......+.+.. .++... ..+....+..|+.+.|.|.+ .+.|.+.+.|++++..+..
T Consensus 101 ~~~~~~~~~~l~V~~--~~~~~~~~~~~~~~~~~~~g~~~~l~C~~~~~~~~g~p~~~v~W~k~~~~l~~ 168 (349)
T 4dep_C 101 TTYCSKVAFPLEVVQ--KDSCFNSPMKLPVHKLYIEYGIQRITCPNVDGYFPSSVKPTITWYMGCYKIQN 168 (349)
T ss_dssp SSCEEEEEEEEEEEC--CCTTSCCSCCCCEEEEETTCSEEEEECCSCTTSSCTTSCCEEEEEETTEECCS
T ss_pred CCceEEEEEEEEEec--CCcccCcccccCcceeeecCccEEEEcCCCcccccCCCCceEEEeeCCEECCC
Confidence 866555555555543 221111 11223356789999999975 6678899999999998754
No 128
>1hnf_A CD2; T lymphocyte adhesion glycoprotein; HET: NAG; 2.50A {Homo sapiens} SCOP: b.1.1.1 b.1.1.3 PDB: 1cdb_A 1gya_A* 1qa9_A
Probab=99.75 E-value=1.8e-17 Score=91.43 Aligned_cols=107 Identities=21% Similarity=0.365 Sum_probs=76.5
Q ss_pred CCccEEEEEEec--cCCCCeeEEee--CCccC----------CC------CCCCeEEEecCCCCCCeEEEEEEEcCCCCc
Q psy12725 1 MLALKFFTCKYE--GNPVKTISWMK--DGKPV----------PD------HNEPVFRIDSVRKEDKGMYQCVIRNEQESA 60 (119)
Q Consensus 1 ~g~~~~l~c~~~--~~~~~~v~w~~--~~~~~----------~~------~~~~~l~~~~~~~~d~g~y~C~~~~~~~~~ 60 (119)
+|+.|+|.|... +.+.+.|.|++ ++..+ .. ..+.+|.|.+++..|+|.|.|.+.+..+..
T Consensus 13 ~G~sv~L~~~~~~~~~~~~~i~W~k~~~~~~i~~~~~~~~~~~~~~R~~~~~ngsL~I~~v~~~DsG~Y~c~~~n~~g~~ 92 (182)
T 1hnf_A 13 LGQDINLDIPSFQMSDDIDDIKWEKTSDKKKIAQFRKEKETFKEKDTYKLFKNGTLKIKHLKTDDQDIYKVSIYDTKGKN 92 (182)
T ss_dssp TTSCEEECCTTCCCCSSEEEEEEEEGGGCCEEEEECGGGCEEESCTTEEECTTSCEEECSCCGGGCEEEEEEEEETTSCE
T ss_pred cCCCEEEeCCcccccCcCCEEEEEECCCCcEEEEEeCccCCCCCCCeEEECCCCCEEECCCChhhCEEEEEEEEeCCCce
Confidence 589999999442 23467899999 77654 11 134689999999999999999999876654
Q ss_pred ee--EeeEEEeeecCCCeeeecCCccccCCCCcEEEEeEEccCCCCeEEEEECCEEc
Q psy12725 61 QA--SGELKLGGRFDPPVIKESFSDETLNPGPNYYFKCIASGNPTPEISWYLDGKKL 115 (119)
Q Consensus 61 ~~--~~~~~v~~~~~~~~~~~~~~~~~~~~g~~~~l~C~~~~~p~~~~~W~~~~~~~ 115 (119)
.. .+.+.|......|.+... +..+.|.|.+.+.|.+.+.|+++|..+
T Consensus 93 ~~~~~~~L~V~~~~~~P~i~~~--------~~~v~L~C~~~~~p~~~~~W~~~g~~l 141 (182)
T 1hnf_A 93 VLEKIFDLKIQERVSKPKISWT--------CINTTLTCEVMNGTDPELNLYQDGKHL 141 (182)
T ss_dssp EEEEEEEEEEECCCCCCEEEEE--------TTTTEEEEECSSCSSCEEEEEESSCEE
T ss_pred eEEEEEEEEEcCcCCCCEEEEc--------cCcEEEEeEccCCCCCEEEEEECCEEC
Confidence 33 334444332234444431 236899999998888899999999876
No 129
>3o4o_C Interleukin-1 receptor type 2; cytokine-receptor complex, beta-trefoil, IG-like fold, immun; HET: NAG; 3.30A {Homo sapiens}
Probab=99.75 E-value=8e-19 Score=104.55 Aligned_cols=115 Identities=18% Similarity=0.263 Sum_probs=85.3
Q ss_pred CCccEEEEEEec-------cCCCCeeEEeeCCccCC--CC-------CCCeEEEecCCCCCCeEEEEEEEcCCCCceeEe
Q psy12725 1 MLALKFFTCKYE-------GNPVKTISWMKDGKPVP--DH-------NEPVFRIDSVRKEDKGMYQCVIRNEQESAQASG 64 (119)
Q Consensus 1 ~g~~~~l~c~~~-------~~~~~~v~w~~~~~~~~--~~-------~~~~l~~~~~~~~d~g~y~C~~~~~~~~~~~~~ 64 (119)
.|+.+.|.|.+. +.|.+.+.|++++..+. .. ....|.|.+++..|.|.|.|.+.+..+......
T Consensus 32 ~G~~v~L~C~~~~~~~~~~~~p~~~v~W~k~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~~~n~~g~~~~~~ 111 (339)
T 3o4o_C 32 EGEPVALRCPQVPYWLWASVSPRINLTWHKNDSARTVPGEEETRMWAQDGALWLLPALQEDSGTYVCTTRNASYCDKMSI 111 (339)
T ss_dssp TTBCCEEECTTSCSSCCSTTSSCCBCCCEESSCCSCCSCCSSSCEEEETTEEEESSBCTTCCEEEECCEEETTEEEEEEE
T ss_pred CCccEEEEeccccccccccCCCCceEEEEECCCCcccCccccccEEeeCCeEEECCCCcccCEEEEEEEECCcceEEEEE
Confidence 489999999997 77888999999987632 21 246799999999999999999998765444445
Q ss_pred eEEEeeecCCCee-eecCCccccCCCCcEEEEeE-----EccCCCCeEEEEECCEEccc
Q psy12725 65 ELKLGGRFDPPVI-KESFSDETLNPGPNYYFKCI-----ASGNPTPEISWYLDGKKLVN 117 (119)
Q Consensus 65 ~~~v~~~~~~~~~-~~~~~~~~~~~g~~~~l~C~-----~~~~p~~~~~W~~~~~~~~~ 117 (119)
.+.+.. .++.. ........+..|+.+.|.|. +.+.|.+.+.|++++..+..
T Consensus 112 ~l~V~~--~~~~~~~~~~~~~~~~~g~~v~l~C~~~~~~~~g~p~~~v~W~k~g~~~~~ 168 (339)
T 3o4o_C 112 ELRVFE--NTDAFLPFISYPQILTLSTSGVLVCPDLSEFTRDKTDVKIQWYKDSLLLDK 168 (339)
T ss_dssp EEEEEC--SCGGGHHHHCEEEEEETTSCEEEECCSCTTTCCSSSCCCBCCEESSCBCCT
T ss_pred EEEEEc--CCCccccccccceEEECCCCEEEEecCCcccccCCCCceEEEecCCeeCCC
Confidence 555432 22111 11122235678999999999 77888899999999987754
No 130
>1sy6_A T-cell surface glycoprotein CD3 gamma/epsilon chain; CD3 epsilon, OKT3 FAB, signaling protein/antibiotic complex; 2.10A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 PDB: 2atp_E*
Probab=99.75 E-value=6.3e-18 Score=94.74 Aligned_cols=105 Identities=23% Similarity=0.388 Sum_probs=72.0
Q ss_pred CccEEEEEEeccCCCCeeEEeeCCccCCC--CCCCeEEEecCCCCCCeEEEEEEEcCCCCceeEeeEEEee---------
Q psy12725 2 LALKFFTCKYEGNPVKTISWMKDGKPVPD--HNEPVFRIDSVRKEDKGMYQCVIRNEQESAQASGELKLGG--------- 70 (119)
Q Consensus 2 g~~~~l~c~~~~~~~~~v~w~~~~~~~~~--~~~~~l~~~~~~~~d~g~y~C~~~~~~~~~~~~~~~~v~~--------- 70 (119)
|+.++|.|.+ |.+.|.|+|++..+.. .....|.|..++.+|.|.|.|.+.+... ....+.+..
T Consensus 18 G~~v~L~C~~---p~~~i~W~k~g~~l~~~~~~~~~L~i~~v~~~DsG~Y~C~~~~~~s---~~~~v~v~~~~~~~~~~~ 91 (204)
T 1sy6_A 18 DGSVLLTCDA---EAKNITWFKDGKMIGFLTEDKKKWNLGSNAKDPRGMYQCKGSQNKS---KPLQVYYRMGSADDAKKD 91 (204)
T ss_dssp SSEEEEEECS---CSSEEEEEETTEEEEEEESSCCCEEEEEGGGCCEEEEEEESSSSCC---CCEEEEEEC---------
T ss_pred CCeEEEEEcC---CCCEEEEEECCEECCCCCCCCCeEEeCCCCcCCCEEEEEEecCCCC---eeEEEEEEEecccccccc
Confidence 8899999998 6789999999987753 3567899999999999999999644321 112222220
Q ss_pred -------------------ecCCCeeeecCCccccC-CCCcEEEEeEEccCCCCeEEEEECCEEcc
Q psy12725 71 -------------------RFDPPVIKESFSDETLN-PGPNYYFKCIASGNPTPEISWYLDGKKLV 116 (119)
Q Consensus 71 -------------------~~~~~~~~~~~~~~~~~-~g~~~~l~C~~~~~p~~~~~W~~~~~~~~ 116 (119)
...++.+.. . ...+. +|+.+.|.|. +.|.|.+.|++++..+.
T Consensus 92 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~-p~~v~~~G~~v~L~C~--g~p~p~i~W~k~~~~l~ 153 (204)
T 1sy6_A 92 AAKKDDAKKDDAKKDGSDGNEEMGGITQ-T-PYKVSISGTTVILTCP--QYPGSEILWQHNDKNIG 153 (204)
T ss_dssp ---------------------------C-C-CCEEEEETTEEEEECS--CCCSSCEEEEETTEEES
T ss_pred ccccccccccccccccccccccccceec-C-CceeeecCCcEEEEcC--CCCCCceEEEECCEECC
Confidence 000111111 1 11233 8999999998 67888999999998764
No 131
>2rcj_C Light chain; immunoglobulin M, polymeric antibodies, immunology, X-RAY solution scattering, constrained modelling, immune system; NMR {Homo sapiens}
Probab=99.75 E-value=5e-17 Score=101.74 Aligned_cols=114 Identities=15% Similarity=0.286 Sum_probs=82.4
Q ss_pred CccEEEEEEeccCCCC--eeEEeeCCccCCCC---------CC------CeEEEecCCCCCCeEEEEEEEcCCCCceeEe
Q psy12725 2 LALKFFTCKYEGNPVK--TISWMKDGKPVPDH---------NE------PVFRIDSVRKEDKGMYQCVIRNEQESAQASG 64 (119)
Q Consensus 2 g~~~~l~c~~~~~~~~--~v~w~~~~~~~~~~---------~~------~~l~~~~~~~~d~g~y~C~~~~~~~~~~~~~ 64 (119)
|+.+.|.|.+.+.+.+ .+.|+|++..+... .. ..|.|..+..+|.|.|+|.+.+..+......
T Consensus 129 g~~v~l~C~~~g~~p~~~~v~W~k~g~~l~~~~~~~~~~~~~~~~~~~~s~L~i~~~~~~d~G~Y~C~a~n~~~~~~~~~ 208 (523)
T 2rcj_C 129 ANKATLVCLISDFYPGAVTVAWKADGSPVKAGVETTKPSKQSNNKYAASSYLSLTPEQWKSHRSYSCQVTHEGSTVEKTV 208 (523)
T ss_pred CCceEEEEEeccccCCceEEEEecCCCCCCCceEeccccccCCCCEEEEEEEEEechhcCCCceEEEEEEecCcccccce
Confidence 7889999999987643 89999998776421 11 2588999999999999999999866544433
Q ss_pred eEEEe-eecCCCeeeecCCccccCCCCcEEEEeEEccC-CCC-eEEEEECCEEc
Q psy12725 65 ELKLG-GRFDPPVIKESFSDETLNPGPNYYFKCIASGN-PTP-EISWYLDGKKL 115 (119)
Q Consensus 65 ~~~v~-~~~~~~~~~~~~~~~~~~~g~~~~l~C~~~~~-p~~-~~~W~~~~~~~ 115 (119)
.+.+. ....+|.+........+.+|+.+.|.|.+.+. |.| .+.|+++|..+
T Consensus 209 ~~~~~~~~~~~P~v~~~~~~~~~~~G~~~~l~C~~~g~~P~p~~v~W~k~g~~~ 262 (523)
T 2rcj_C 209 APTECSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPQPVTVSWNSGALTS 262 (523)
T ss_pred eeeecCCCCcCCEEEecCCCcccccCCceEEEEEEeceeCCCeEEEEecCCccc
Confidence 32211 11235555533333456789999999999886 777 89999998764
No 132
>3d9a_H Heavy chain of hyhel10 antibody fragment (FAB); lysozyme, antigen, allergen, antimic bacteriolytic enzyme, glycosidase, hydrolase; 1.20A {Mus musculus} PDB: 3hfm_H 1gpo_H 3ks0_H* 1dqd_H 1ndm_B 1nak_H 1dqq_B 1dqm_H 1dqj_B 1nby_B 1nbz_B 1xgu_B 1ndg_B 1xgt_B 1xgp_B 1xgq_B 1xgr_B 1s5i_H 1f8t_H 1f90_H ...
Probab=99.75 E-value=6.5e-18 Score=94.79 Aligned_cols=113 Identities=17% Similarity=0.336 Sum_probs=78.9
Q ss_pred CCccEEEEEEeccCC--CCeeEEeeCC--ccC------------------CC---------CCCCeEEEecCCCCCCeEE
Q psy12725 1 MLALKFFTCKYEGNP--VKTISWMKDG--KPV------------------PD---------HNEPVFRIDSVRKEDKGMY 49 (119)
Q Consensus 1 ~g~~~~l~c~~~~~~--~~~v~w~~~~--~~~------------------~~---------~~~~~l~~~~~~~~d~g~y 49 (119)
.|+.+.|.|.+.+.+ .+.+.|+|+. ... .. .....|.|.+++.+|+|.|
T Consensus 14 ~G~~v~L~C~~~~~~~~~~~v~W~r~~~g~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~I~~v~~~D~G~Y 93 (210)
T 3d9a_H 14 PSQTLSLTCSVTGDSITSDYWSWIRKFPGNRLEYMGYVSYSGSTYYNPSLKSRISITRDTSKNQYYLDLNSVTTEDTATY 93 (210)
T ss_dssp TTSCEEEEEEEESSCGGGSCEEEEEEETTTEEEEEEEECTTSCEEECGGGTTTEEEEEEGGGTEEEEEECSCCGGGCEEE
T ss_pred CCCcEEEEEEEecccCCCCcEEEEEeCCCCCcEEEEEEcCCCCeEECcccCceEEEEecCCCCEEEEEECCCCcccCEEE
Confidence 489999999998764 4789999852 211 00 0123799999999999999
Q ss_pred EEEEEcCCCCceeEeeEEEeee-cCCCeeeecCCccccCCCCcEEEEeEEccC-CCC-eEEEEECCEE
Q psy12725 50 QCVIRNEQESAQASGELKLGGR-FDPPVIKESFSDETLNPGPNYYFKCIASGN-PTP-EISWYLDGKK 114 (119)
Q Consensus 50 ~C~~~~~~~~~~~~~~~~v~~~-~~~~~~~~~~~~~~~~~g~~~~l~C~~~~~-p~~-~~~W~~~~~~ 114 (119)
.|.+.+.. .......+.+... ..+|.+...+....+..|+.+.|.|.+.+. |.| .+.|++++..
T Consensus 94 ~C~~~~~~-~~~~~~~l~V~~~~~~~P~v~~~~~~~~~~~g~~v~L~C~~~g~~P~p~~v~W~~~~~~ 160 (210)
T 3d9a_H 94 YCANWDGD-YWGQGTLVTVSAAKTTPPSVYPLAPGSAAQTNSMVTLGCLVKGYFPEPVTVTWNSGSLS 160 (210)
T ss_dssp EEEETTSS-CBCCCEEEEECCCCCBCCEEEEECCTTSCCCSSEEEEEEEEEEEBSSCCEEEEGGGTBC
T ss_pred EEEEecCc-ccccceEEEeccCCCCCCEEEEecCCcccccCCcEEEEEEEeeEecCCcEEEEeeCCcc
Confidence 99998863 2222344444321 124555544434456789999999999887 777 9999998864
No 133
>2wng_A Tyrosine-protein phosphatase non-receptor type substrate 1; signal regulatory protein alpha, immunoglobulin superfamily, phosphoprotein; HET: NAG; 2.49A {Homo sapiens}
Probab=99.75 E-value=6.8e-18 Score=100.22 Aligned_cols=113 Identities=16% Similarity=0.300 Sum_probs=79.0
Q ss_pred CCccEEEEEEeccCCCC--eeEEeeCCccCCCC--------CC------CeEEEecCCCCCCeEEEEEEEcCCCCc-eeE
Q psy12725 1 MLALKFFTCKYEGNPVK--TISWMKDGKPVPDH--------NE------PVFRIDSVRKEDKGMYQCVIRNEQESA-QAS 63 (119)
Q Consensus 1 ~g~~~~l~c~~~~~~~~--~v~w~~~~~~~~~~--------~~------~~l~~~~~~~~d~g~y~C~~~~~~~~~-~~~ 63 (119)
.|+.+.|.|.+.+.+.+ .+.|++++..+... .. +.|.+......|.|.|.|.+.|..+.. ...
T Consensus 131 ~g~~~~l~C~~~g~p~~~~~v~W~k~g~~l~~~~~~~~~~~~~~~~~~~s~L~i~~~~~d~~g~Y~C~a~n~~~~~~~~~ 210 (327)
T 2wng_A 131 PQHTVSFTCESHGFSPRDITLKWFKNGNELSDFQTNVDPVGESVSYSIHSTAKVVLTREDVHSQVICEVAHVTLQGDPLR 210 (327)
T ss_dssp TTCEEEEEEEEEEEBSSCCEEEEEETTEECCCEEEEEECSSCCSCEEEEEEEEEECCTTGGGCEEEEEEECTTSCSCCEE
T ss_pred CCCEEEEEEEEeCccCCCcEEEEEECCEEccccccccccccCCCceEEEEEEEEechhcCcCceEEEEEeccccCCCccc
Confidence 38899999999987655 89999999877532 11 235555555666799999999976542 122
Q ss_pred eeEEE--eeecCCCeeeecCCccccCCCCcEEEEeEEccCC-CC-eEEEEECCEEcc
Q psy12725 64 GELKL--GGRFDPPVIKESFSDETLNPGPNYYFKCIASGNP-TP-EISWYLDGKKLV 116 (119)
Q Consensus 64 ~~~~v--~~~~~~~~~~~~~~~~~~~~g~~~~l~C~~~~~p-~~-~~~W~~~~~~~~ 116 (119)
....+ .+ ..+|.+...+.. +.+|+.+.|.|.+.+.+ ++ .+.|++||..+.
T Consensus 211 ~~~~~~~~v-~~~P~i~~~~~~--~~~G~~v~l~C~~~g~~p~~~~v~W~k~g~~l~ 264 (327)
T 2wng_A 211 GTANLSETI-RVPPTLEVTQQP--VRAENQVNVTCQVRKFYPQRLQLTWLENGNVSR 264 (327)
T ss_dssp EEEEGGGTB-CBCCEEEEEEEC--CSSTTCCEEEEEEEEEBSSCEEEEEEETTEEEE
T ss_pred ceEEecccc-CCCCEEEEecCC--cCCCCcEEEEEEEccccCCCcEEEEEECCeEcc
Confidence 22222 22 246666654433 77999999999998864 44 799999999875
No 134
>1z7z_I Intercellular adhesion molecule-1; ICAM-1,kilifi,CD54,human coxsackievirus A21, cryo-electron microscopy,virus-receptor complex, icosahedral virus; HET: NAG NDG; 8.00A {Homo sapiens} SCOP: b.1.1.3 b.1.1.3 b.1.1.4 b.1.1.4 b.1.1.4
Probab=99.75 E-value=9.3e-18 Score=103.27 Aligned_cols=112 Identities=16% Similarity=0.211 Sum_probs=84.3
Q ss_pred CCccEEEEEEeccCCCCee-----EEeeCCccCCCCCCCeEEEecCCCCCCeEEEEEEEcCCCCceeEeeEEEeeecCCC
Q psy12725 1 MLALKFFTCKYEGNPVKTI-----SWMKDGKPVPDHNEPVFRIDSVRKEDKGMYQCVIRNEQESAQASGELKLGGRFDPP 75 (119)
Q Consensus 1 ~g~~~~l~c~~~~~~~~~v-----~w~~~~~~~~~~~~~~l~~~~~~~~d~g~y~C~~~~~~~~~~~~~~~~v~~~~~~~ 75 (119)
.|+.+.|.|.+.+ |.+.+ .|+|++..+.......|.|.+++. |.| |.|.+.+..+.......+.+. ..|.
T Consensus 13 ~G~~v~L~C~~~g-p~p~~~~~~~~w~k~~~~~~~~~~~~l~i~~v~~-d~g-Y~C~a~~~~~~~~~~~~l~V~--~~P~ 87 (450)
T 1z7z_I 13 RGGSVLVTCSTSC-DQPMLLGIETPLPKKELLLPGNNRKVYELSNVQE-DSQ-PMCYSNCPDGQSTAKTFLTVY--WTPE 87 (450)
T ss_dssp TTEEEEEEEECCS-SCCCEEEECSSSCEEECCSSTTTEEEEEEEEECS-CBC-CEEEEEETTEEEEEECEEEEE--BCCS
T ss_pred cCCcEEEEEEccC-CCcccccccceeeecceEecCCCceEEEEEeccc-CCe-eEEEEeCCCCcceeEEEEEEE--eCCC
Confidence 3899999999998 88888 899988755444456788888877 989 999998654333334445443 2343
Q ss_pred eeeecCCccccCCCCcEEEEeEEccCCCC---eEEEEECCEEccc
Q psy12725 76 VIKESFSDETLNPGPNYYFKCIASGNPTP---EISWYLDGKKLVN 117 (119)
Q Consensus 76 ~~~~~~~~~~~~~g~~~~l~C~~~~~p~~---~~~W~~~~~~~~~ 117 (119)
.+...+....+.+|+.+.|.|.+.+.|++ .+.|++++..+..
T Consensus 88 ~~~~~~~~~~v~~G~~v~L~C~~~g~~~~~~~~v~W~k~g~~l~~ 132 (450)
T 1z7z_I 88 RVELAPLPSWQPVGKNLTLRCQVEGGAPRANLTVVLLRGEKELKR 132 (450)
T ss_dssp EEEECCCCSEECTTSEEEEEEEEECCBCGGGEEEEEEETTEEEEE
T ss_pred cceecCCCceEeeCCeEEEEEEecCCCCCcCcEEEEeeCCEEeec
Confidence 34345555678899999999999998877 8999999988753
No 135
>1f3r_B FV antibody fragment; IG-fold, immuno complex, antibody-antigen, beta-turn, immune system; HET: NLE; NMR {Rattus norvegicus} SCOP: b.1.1.1 b.1.1.1
Probab=99.74 E-value=4e-17 Score=94.21 Aligned_cols=113 Identities=19% Similarity=0.284 Sum_probs=76.8
Q ss_pred CCccEEEEEEeccCC--CCeeEEeeCC--ccC------------------CC---------CCCCeEEEecCCCCCCeEE
Q psy12725 1 MLALKFFTCKYEGNP--VKTISWMKDG--KPV------------------PD---------HNEPVFRIDSVRKEDKGMY 49 (119)
Q Consensus 1 ~g~~~~l~c~~~~~~--~~~v~w~~~~--~~~------------------~~---------~~~~~l~~~~~~~~d~g~y 49 (119)
.|+.|+|.|.+.+.+ .+.+.|+|+. ..+ .. .....|.|.+++.+|+|.|
T Consensus 14 ~G~~v~L~C~~~g~p~~~~~v~W~k~~~g~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~~L~I~~v~~~DsG~Y 93 (257)
T 1f3r_B 14 PSETLSLTCTVSGFSLTSFSVSWVRHPSGKGPEWMGRMWYDGYTAYNSALKSRLSISRDTSKNQVFLKMNSLQTDDTGTY 93 (257)
T ss_dssp TTSEEEEEEEEESSCTTTSCCEEEEEETTSCCEEEEEECSSSCEEECSSSSTTEEEEEETTTTEEEEEEESCCTTCCEEE
T ss_pred CCceEEEEEEEecccCCCccEEEEEeCCCCCcEEEEEEecCCceeeCcccCCcEEEEEECCCCEEEEEECCCCcccCEEE
Confidence 489999999998874 6789999852 111 00 1123799999999999999
Q ss_pred EEEEEcCCC-------Cc--eeEeeEEEeeec------------CCCeeeecCCccccCCCCcEEEEeEEccCCCCeEEE
Q psy12725 50 QCVIRNEQE-------SA--QASGELKLGGRF------------DPPVIKESFSDETLNPGPNYYFKCIASGNPTPEISW 108 (119)
Q Consensus 50 ~C~~~~~~~-------~~--~~~~~~~v~~~~------------~~~~~~~~~~~~~~~~g~~~~l~C~~~~~p~~~~~W 108 (119)
.|.+.+..+ .. .....+.|.... .++.+...+....+.+|+.+.|.|.+.+.+.+.+.|
T Consensus 94 ~C~a~n~~g~~~~~~~~~~~~~~~~l~V~~~~~~~~~~~~~~~~~~~~~~~~p~~~~v~~G~~v~L~C~~~~~~~~~v~W 173 (257)
T 1f3r_B 94 YCTRDLYGGYPLGFWYFDFWGPGTMVTVSSGGGGSGGGGSGGGGSDIKLTQSPSLLSASVGDRVTLSCKGSQNINNYLAW 173 (257)
T ss_dssp EEEEESSSSCCSSCCCEEEECCCEEEEECSSCCSSCCSSSCCCCCEECSCEETSEECCCTTCCEEEEEECSSCCBTCEEE
T ss_pred EEEEcccccCccccccccccCCceEEEEEeCCccccccccCCCccceEEEccCCEEEEcCCCCEEEEEEECCcCCCcEEE
Confidence 999998742 11 122334443210 011222334445678999999999998888889999
Q ss_pred EE--CCE
Q psy12725 109 YL--DGK 113 (119)
Q Consensus 109 ~~--~~~ 113 (119)
++ +|.
T Consensus 174 ~k~~~g~ 180 (257)
T 1f3r_B 174 YQQKLGE 180 (257)
T ss_dssp EEECTTS
T ss_pred EEECCCC
Confidence 99 554
No 136
>1wio_A CD4, T-cell surface glycoprotein CD4; immunoglobulin fold, transmembrane, MHC lipoprotein, polymorphism; 3.90A {Homo sapiens} SCOP: b.1.1.1 b.1.1.1 b.1.1.3 b.1.1.3 PDB: 1wip_A 1wiq_A 3t0e_E
Probab=99.74 E-value=1.6e-18 Score=104.21 Aligned_cols=110 Identities=9% Similarity=0.053 Sum_probs=82.3
Q ss_pred CCccEEEEEEeccCCCCeeEEeeCCccCCCCCCCeEEEecCCCCCCeEEEEEEEcCCCCceeEeeEEEeeecCCCeeeec
Q psy12725 1 MLALKFFTCKYEGNPVKTISWMKDGKPVPDHNEPVFRIDSVRKEDKGMYQCVIRNEQESAQASGELKLGGRFDPPVIKES 80 (119)
Q Consensus 1 ~g~~~~l~c~~~~~~~~~v~w~~~~~~~~~~~~~~l~~~~~~~~d~g~y~C~~~~~~~~~~~~~~~~v~~~~~~~~~~~~ 80 (119)
.|+.+.|.|.+.+.|.+.+.|++++..+. .....|.|.+++..|.|.|.|.+.+...... ..+.+.+. .+|...
T Consensus 110 ~G~~v~l~C~~~~~p~~~v~W~~~~~~~~-~~~~~L~i~~v~~~d~G~Y~C~a~~~~~~~~--~~~~l~v~-~~p~~~-- 183 (363)
T 1wio_A 110 QGQSLTLTLESPPGSSPSVQCRSPRGKNI-QGGKTLSVSQLELQDSGTWTCTVLQNQKKVE--FKIDIVVL-AFQKAS-- 183 (363)
T ss_dssp SBSCEEEEEECCTTCCCCEEEECSSSCEE-EESSEEEECSBCGGGCEECEEEEEETTEEEE--ECCEECEE-CCSCSE--
T ss_pred cCCCEEEEEEcCCCCCCeEEEEcCCCccc-ccceEEEEeeCChhcCCEEEEEEecCCCeEE--EEEEEEEe-cCCCCC--
Confidence 48999999999888899999999876543 2567899999999999999999998643333 33333332 222221
Q ss_pred CCccccCCCCcEEEEeEEcc-----CCCCeEEEEECCEEccc
Q psy12725 81 FSDETLNPGPNYYFKCIASG-----NPTPEISWYLDGKKLVN 117 (119)
Q Consensus 81 ~~~~~~~~g~~~~l~C~~~~-----~p~~~~~W~~~~~~~~~ 117 (119)
....+.+|+.+.|.|.+.+ .|.|.+.|+++|..+..
T Consensus 184 -~~~~~~~G~~v~l~C~~~~~~~~~~P~p~i~W~~~g~~~~~ 224 (363)
T 1wio_A 184 -SIVYKKEGEQVEFSFPLAFTVEKLTGSGELWWQAERASSSK 224 (363)
T ss_dssp -EEEEEETBCCEEEECCCCCCCCSSCEEEEEEEEESSCCCCC
T ss_pred -CceEEecCCEEEEEEEEecccccCCCceeEEEecCCCCccc
Confidence 2335678999999998776 67789999999876543
No 137
>2y23_A Myomesin; structural protein, sarcomere, M-BAND, immunoglobulin- like; 2.50A {Homo sapiens}
Probab=99.74 E-value=2.1e-17 Score=97.27 Aligned_cols=113 Identities=17% Similarity=0.256 Sum_probs=82.5
Q ss_pred CCccEEEEEEec-cCCCCeeEEeeCCccCCCCC-----------CCeEEEecCCCCCCeEEEEEEEcCCCCceeEeeEEE
Q psy12725 1 MLALKFFTCKYE-GNPVKTISWMKDGKPVPDHN-----------EPVFRIDSVRKEDKGMYQCVIRNEQESAQASGELKL 68 (119)
Q Consensus 1 ~g~~~~l~c~~~-~~~~~~v~w~~~~~~~~~~~-----------~~~l~~~~~~~~d~g~y~C~~~~~~~~~~~~~~~~v 68 (119)
.|+.+.|.|.+. +.|.+.+.|++++..+.... ...|.|.+++..|.|.|.|.+.+.... ....+.+
T Consensus 121 ~G~~v~l~C~~~~~~p~~~v~W~~~~~~i~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~~~~~~~~--~~~~~~~ 198 (312)
T 2y23_A 121 EKGQVRFWMQAEKLSGNAKVNYIFNEKEIFEGPKYKMHIDRNTGIIEMFMEKLQDEDEGTYTFQLQDGKAT--NHSTVVL 198 (312)
T ss_dssp SSSCEEEEEEESCCCSSCEEEEEETTEEECSSSSCEEEEETTTTEEEEEESCCCGGGCEEEEEEEESSSCE--EEEEEEE
T ss_pred eCCCEEEEEEEEeCCCCCEEEEEECCEECeeCCcEEEEEccCCCEEEEEEccCCcccCEeEEEEEEeCCce--EEEEEEE
Confidence 388999999998 77899999999988765422 123899999999999999999865322 2222332
Q ss_pred ee------------------ecCCCeeeecCCccccCCCCcEEEEeEEccCCCC-eEEEEECCEEcc
Q psy12725 69 GG------------------RFDPPVIKESFSDETLNPGPNYYFKCIASGNPTP-EISWYLDGKKLV 116 (119)
Q Consensus 69 ~~------------------~~~~~~~~~~~~~~~~~~g~~~~l~C~~~~~p~~-~~~W~~~~~~~~ 116 (119)
.. ...+|.+.... ...+..|+.+.|.|.+.+.|.+ .+.|++++..+.
T Consensus 199 ~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~-~~~v~~G~~~~l~C~~~~~p~~~~v~W~~~g~~~~ 264 (312)
T 2y23_A 199 VGDVFKKLQKEAEFQRQEWIRKQGPHFVEYL-SWEVTGECNVLLKCKVANIKKETHIVWYKDEREIS 264 (312)
T ss_dssp CTHHHHHHHHHHHHHHHHHHHHHSSEEEEEE-EEEEETTTEEEEEEEEESCCSSCEEEEEETTEEEE
T ss_pred cchhhhhhcccccccccchhhccCCceeecc-eEEEeCCCEEEEEEEEcCCCCCCEEEEeeCCEECC
Confidence 10 01124433222 2457799999999999999888 999999999876
No 138
>4fom_A Poliovirus receptor-related protein 3; immunoglobulin-like domain, IG domain, cell adhesion; HET: NAG BMA MAN FUC; 3.93A {Homo sapiens}
Probab=99.74 E-value=2.4e-18 Score=101.33 Aligned_cols=114 Identities=18% Similarity=0.228 Sum_probs=84.6
Q ss_pred CccEEEEEEe-ccCCCCeeEEeeCCccCCCC-----C-----CCeEEEecCCCCCCeEEEEEEEcCCCCceeEeeEEEee
Q psy12725 2 LALKFFTCKY-EGNPVKTISWMKDGKPVPDH-----N-----EPVFRIDSVRKEDKGMYQCVIRNEQESAQASGELKLGG 70 (119)
Q Consensus 2 g~~~~l~c~~-~~~~~~~v~w~~~~~~~~~~-----~-----~~~l~~~~~~~~d~g~y~C~~~~~~~~~~~~~~~~v~~ 70 (119)
|+.+.|.|.. .+.|.+.+.|++++..+... . ...|.+..+...|.|.|+|.+.|..+.......+.+.+
T Consensus 129 ~~~~~l~C~~~~g~P~~~i~W~~~~~~~~~~~~~~~~~~~~~~s~l~i~~~~~~d~g~Y~C~a~n~~~~~~~~~~~~l~V 208 (308)
T 4fom_A 129 NETVAAICIAATGKPVAHIDWEGDLGEMESTTTSFPNETATIISQYKLFPTRFARGRRITCVVKHPALEKDIRYSFILDI 208 (308)
T ss_dssp SCEEEEEEEEEEEBSCCEEEECCCSSBCCEEEEECTTSCEEEEEEEEECCCGGGTTCEEEEEEECTTCSSCEEEEEECCC
T ss_pred CceEEEEEEecCCcCCceEEEEECCcccccccceeeeecccccccceEEeeeecCCccEEEEEEccCCCCceEEeEEEEE
Confidence 6789999976 57789999999998776421 1 13588888899999999999999876655555555444
Q ss_pred ecCCCeeeecCC-ccccCCCCcEEEEeEEccCCCC-eEEEEECCEEcc
Q psy12725 71 RFDPPVIKESFS-DETLNPGPNYYFKCIASGNPTP-EISWYLDGKKLV 116 (119)
Q Consensus 71 ~~~~~~~~~~~~-~~~~~~g~~~~l~C~~~~~p~~-~~~W~~~~~~~~ 116 (119)
. .+|.+...+. ...+..|+.+.|.|.+.+.|.| .+.|++++..+.
T Consensus 209 ~-~~P~~~~~~~~~~~~~~g~~v~l~C~~~g~P~p~~v~W~k~~~~~~ 255 (308)
T 4fom_A 209 Q-YAPEVSVTGYDGNWFVGRKGVNLKCNADANPPPFKSVWSRLDGQWP 255 (308)
T ss_dssp C-EEEEECCBCCCSCEETTCCSCEEECCEEEESCEEEEECCBSSSCCC
T ss_pred e-cCCeeEEcccceeeeeccccEEEEEEEecCCCCcEEEEEECCeECC
Confidence 2 2455544333 3346678999999999999888 699999887654
No 139
>1za6_B IGG heavy chain; immunoglobulin fold, CH2-domain-deletion, immune system; 2.80A {Homo sapiens} SCOP: b.1.1.1 b.1.1.2 b.1.1.2
Probab=99.74 E-value=1.1e-17 Score=100.14 Aligned_cols=114 Identities=18% Similarity=0.295 Sum_probs=79.4
Q ss_pred CCccEEEEEEeccC--CCCeeEEeeC--CccC-------------------CC---------CCCCeEEEecCCCCCCeE
Q psy12725 1 MLALKFFTCKYEGN--PVKTISWMKD--GKPV-------------------PD---------HNEPVFRIDSVRKEDKGM 48 (119)
Q Consensus 1 ~g~~~~l~c~~~~~--~~~~v~w~~~--~~~~-------------------~~---------~~~~~l~~~~~~~~d~g~ 48 (119)
.|+.+.|.|.+.+. +.+.+.|||+ +..+ .. .....|.|.+++.+|+|.
T Consensus 14 ~G~~v~L~C~~~~~~~~~~~v~W~k~~~g~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~~L~I~~v~~~D~G~ 93 (344)
T 1za6_B 14 PGASVKISCKASGYTFTDHAIHWVKQNPGQRLEWIGYFSPGNDDFKYNERFKGKATLTADTSASTAYVELSSLRSEDTAV 93 (344)
T ss_dssp TTCCEEEEEEEESSCTTSSCEEEEEECSSSCEEEEEEEETTTTEEEECTTTBTTEEEEEETTTTEEEEEECSCCGGGCEE
T ss_pred CCCcEEEEEEcCCccccccEEEEEEECCCCCcEEEEEEecCCCceEECcccCCcEEEEEecCCCEEEEEECCCCcccCEE
Confidence 48999999999876 3678999986 3221 00 012479999999999999
Q ss_pred EEEEEEcCCCCceeEeeEEEee-ecCCCeeeecCCccccCCCCcEEEEeEEccC-CC-CeEEEEECCEE
Q psy12725 49 YQCVIRNEQESAQASGELKLGG-RFDPPVIKESFSDETLNPGPNYYFKCIASGN-PT-PEISWYLDGKK 114 (119)
Q Consensus 49 y~C~~~~~~~~~~~~~~~~v~~-~~~~~~~~~~~~~~~~~~g~~~~l~C~~~~~-p~-~~~~W~~~~~~ 114 (119)
|.|.+.+..........+.+.. ...+|.+...+....+..|+.+.|.|.+.+. |. +.+.|++++..
T Consensus 94 Y~C~~~n~~~~~~~~~~l~V~~~~~~~P~i~~~~~~~~~~~g~~v~L~C~~~g~~P~~~~v~W~k~g~~ 162 (344)
T 1za6_B 94 YFCTRSLNMAYWGQGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALT 162 (344)
T ss_dssp EEEEETTTTCEECCCEEEEECSSCCBCCEEEEECCSCTTTSSSEEEEEEEEEEEBSSCCCEEETTTTBC
T ss_pred EEEEEecCcceecCcEEEEEecCCCCCCeEEEccccccccCCCcEEEEEEEeeEECCCeEEEEecCCcc
Confidence 9999988543333334455532 1124555444434456789999999999886 54 68999999865
No 140
>1itb_B Type 1 interleukin-1 receptor; immunoglobulin fold, transmembrane, glycoprotein, signal, complex (immunoglobulin/receptor); 2.50A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 b.1.1.4 PDB: 1ira_Y* 4dep_B* 1g0y_R
Probab=99.74 E-value=8e-19 Score=103.58 Aligned_cols=114 Identities=24% Similarity=0.386 Sum_probs=85.4
Q ss_pred CCccEEEEEEeccCC-CCeeEEeeCCccCCC---------CCCCeEEEecCCCCCCeEEEEEEEcCCCCceeEeeEEEee
Q psy12725 1 MLALKFFTCKYEGNP-VKTISWMKDGKPVPD---------HNEPVFRIDSVRKEDKGMYQCVIRNEQESAQASGELKLGG 70 (119)
Q Consensus 1 ~g~~~~l~c~~~~~~-~~~v~w~~~~~~~~~---------~~~~~l~~~~~~~~d~g~y~C~~~~~~~~~~~~~~~~v~~ 70 (119)
.|+.+.|.|.+.+.+ .+.+.|+|++..... .....|.|.+++..|.|.|.|.+.+..+.......+.+..
T Consensus 19 ~G~~v~L~C~~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~a~n~~g~~~~~~~v~v~~ 98 (315)
T 1itb_B 19 ANEIDVRPCPLNPNEHKGTITWYKDDSKTPVSTEQASRIHQHKEKLWFVPAKVEDSGHYYCVVRNSSYCLRIKISAKFVE 98 (315)
T ss_dssp TTSCCCCBCCCCSCCCSSCCCEECTTSCSCSCCCTTSSSEECSSBEECTTCCGGGCSCCEECCCSSSCCCCEECCCEEEC
T ss_pred CCCcEEEEeeccCcCCCceEEEEeCCCcCccccccCCcEeccCCeEEECCCChhhCEEEEEEEeCCceEEEEEEEEEEeC
Confidence 389999999998876 789999999864321 1245799999999999999999998866555444444332
Q ss_pred ecCCCeeeecC---CccccCCCCcEEEEeEE------ccCCCCeEEEEECCEEcc
Q psy12725 71 RFDPPVIKESF---SDETLNPGPNYYFKCIA------SGNPTPEISWYLDGKKLV 116 (119)
Q Consensus 71 ~~~~~~~~~~~---~~~~~~~g~~~~l~C~~------~~~p~~~~~W~~~~~~~~ 116 (119)
.+|.+...+ ....+..|+.+.|.|.+ .+.|.+.+.|++++..+.
T Consensus 99 --~~p~~~~~~~~~~~~~~~~g~~v~l~C~~~~~~~~~g~p~~~i~W~k~~~~l~ 151 (315)
T 1itb_B 99 --NEPNLCYNAQAIFKQKLPVAGDGGLVCPYMEFFKNENNELPKLQWYKDCKPLL 151 (315)
T ss_dssp --CCTTSSSCGGGEEEEEEETTSCEEEECSSCTTTCTTTTCCCCCEEEETTEECC
T ss_pred --CCCCcccccccccceEEecCCCeEEEEecccccccCCCCCCEEEEEECCEECC
Confidence 344433222 12356789999999998 788889999999999874
No 141
>2zg1_A Sialic acid-binding IG-like lectin 5; siglec-5 inhibitory receptor, two-domain structure, V-SET, C2-SET, IG-like domain, 6'-sialyllactose complex; HET: SIA; 2.70A {Homo sapiens} PDB: 2zg3_A* 2zg2_A
Probab=99.74 E-value=7.5e-17 Score=90.53 Aligned_cols=111 Identities=22% Similarity=0.383 Sum_probs=75.9
Q ss_pred CCccEEEEEEeccC-------CCCeeEEeeCCcc------CC---------C-------------CCCCeEEEecCCCCC
Q psy12725 1 MLALKFFTCKYEGN-------PVKTISWMKDGKP------VP---------D-------------HNEPVFRIDSVRKED 45 (119)
Q Consensus 1 ~g~~~~l~c~~~~~-------~~~~v~w~~~~~~------~~---------~-------------~~~~~l~~~~~~~~d 45 (119)
.|+.|.|.|.+.+. +.+.+.|+|++.. +. . ....+|.|.+++.+|
T Consensus 14 ~G~~v~L~C~~~~~~~~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~sL~I~~v~~~D 93 (214)
T 2zg1_A 14 EGLCVLVPCSFSYPWRSWYSSPPLYVYWFRDGEIPYYAEVVATNNPDRRVKPETQGRFRLLGDVQKKNCSLSIGDARMED 93 (214)
T ss_dssp TTCCEEECCEEECCCCCCSCCCCEEEEEEETTCCGGGCCBSEESCTTSCBCTTTTTTEEECSCGGGTBCCEEECSCCGGG
T ss_pred cCccEEEeeeeecCCcccCCCCceEEEEEecCCCCcccceEecCCcccccCccccCceEEeccCCCCeEEEEEccCCHhh
Confidence 48999999998753 4678999997542 10 0 012479999999999
Q ss_pred CeEEEEEEEcCCCCc----eeEeeEEEeeecCCCeeeecCCccccCCCCcEEEEeEEccC----CCCeEEEEECCEE
Q psy12725 46 KGMYQCVIRNEQESA----QASGELKLGGRFDPPVIKESFSDETLNPGPNYYFKCIASGN----PTPEISWYLDGKK 114 (119)
Q Consensus 46 ~g~y~C~~~~~~~~~----~~~~~~~v~~~~~~~~~~~~~~~~~~~~g~~~~l~C~~~~~----p~~~~~W~~~~~~ 114 (119)
+|.|.|.+.+..+.. .....+.+.....+|.+.. + ..+.+|+.+.|.|.+.+. |.|.+.|++++..
T Consensus 94 ~G~Y~C~~~~~~~~~~~~~~~~~~l~V~~~~~~p~i~~-~--~~~~~G~~v~L~C~~~~~~~~~p~p~v~W~~~~~~ 167 (214)
T 2zg1_A 94 TGSYFFRVERGRDVKYSYQQNKLNLEVTALIEKPDIHF-L--EPLESGRPTRLSCSLPGSCEAGPPLTFSWTGNALS 167 (214)
T ss_dssp CEEEEEEEEETTTEEEECCSSCEEEEEECCCCCCEEC-----CCCCTTCCEEEEEECTTCCSCSSCCEEEEESSTTS
T ss_pred CceEEEEEEcCCCceeeecCCceEEEEecCCCCCceec-C--ccccCCCeEEEEEEeccCCCCCCCceEEEeCCCCc
Confidence 999999999864211 1233444433222455443 1 236789999999998764 7789999998754
No 142
>1z7z_I Intercellular adhesion molecule-1; ICAM-1,kilifi,CD54,human coxsackievirus A21, cryo-electron microscopy,virus-receptor complex, icosahedral virus; HET: NAG NDG; 8.00A {Homo sapiens} SCOP: b.1.1.3 b.1.1.3 b.1.1.4 b.1.1.4 b.1.1.4
Probab=99.74 E-value=2.3e-17 Score=101.48 Aligned_cols=113 Identities=15% Similarity=0.208 Sum_probs=81.4
Q ss_pred CCccEEEEEEeccCCCC---eeEEeeCCccCCCC------CCCeEEEecCCCCCCeEEEEEEEcCCCCcee--------E
Q psy12725 1 MLALKFFTCKYEGNPVK---TISWMKDGKPVPDH------NEPVFRIDSVRKEDKGMYQCVIRNEQESAQA--------S 63 (119)
Q Consensus 1 ~g~~~~l~c~~~~~~~~---~v~w~~~~~~~~~~------~~~~l~~~~~~~~d~g~y~C~~~~~~~~~~~--------~ 63 (119)
.|+.+.|.|.+.+.+.+ .|.|+|++..+... ....|.|..++..|.|.|+|.+.|..+.... .
T Consensus 100 ~G~~v~L~C~~~g~~~~~~~~v~W~k~g~~l~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~~~~s~~ 179 (450)
T 1z7z_I 100 VGKNLTLRCQVEGGAPRANLTVVLLRGEKELKREPAVGEPAEVTTTVLVRRDHHGANFSCRTELDLRPQGLELFENTSAP 179 (450)
T ss_dssp TTSEEEEEEEEECCBCGGGEEEEEEETTEEEEEEECCTTTEEEEEEEECCSSCSSCEEEEEEEEECGGGTSCEEEEECCC
T ss_pred eCCeEEEEEEecCCCCCcCcEEEEeeCCEEeecccccccccceEEEEEeeccccCceEEEEEEcccCCCCceEEeeccCc
Confidence 48999999999988777 89999998776421 2357999999999999999999987543221 1
Q ss_pred eeEEEeee-cCCCeeeecCCccccCCCCcEEEEeEEccC-C--CCeEEEEECCEEcc
Q psy12725 64 GELKLGGR-FDPPVIKESFSDETLNPGPNYYFKCIASGN-P--TPEISWYLDGKKLV 116 (119)
Q Consensus 64 ~~~~v~~~-~~~~~~~~~~~~~~~~~g~~~~l~C~~~~~-p--~~~~~W~~~~~~~~ 116 (119)
..+.+... ..+|.+.. ...+.+|+.+.|.|.+.+. | .+.+.|++++..+.
T Consensus 180 ~~l~v~~~~~~~p~~~~---~~~v~~G~~v~l~C~~~g~~P~~~~~~~W~~~~~~~~ 233 (450)
T 1z7z_I 180 YQLQTFVLPATPPQLVS---PRVLEVDTQGTVVCSLDGLFPVSEAQVHLALGDQRLN 233 (450)
T ss_dssp EECEECCCCSSCCEEEC---CSEEETTSEEEEEEEEESCTTGGGCEEEEEETTEECC
T ss_pred cceeeeccCCCCCEecC---ceeEEeCCcEEEEEEeeCCCCCCceEEEEeCCCEeCC
Confidence 12222111 11232221 1457789999999999988 6 67999999998764
No 143
>1moe_A Anti-CEA MAB T84.66; anti carcinoembryonic antigen, diabody, dimer, SCFV, variable domain, immune system; 2.60A {Mus musculus} SCOP: b.1.1.1 b.1.1.1
Probab=99.74 E-value=4.6e-17 Score=92.90 Aligned_cols=111 Identities=21% Similarity=0.353 Sum_probs=77.0
Q ss_pred CCccEEEEEEeccCC----CCeeEEeeCC--ccCC----------C--C---------CCCeEEEecCCCCCCeEEEEEE
Q psy12725 1 MLALKFFTCKYEGNP----VKTISWMKDG--KPVP----------D--H---------NEPVFRIDSVRKEDKGMYQCVI 53 (119)
Q Consensus 1 ~g~~~~l~c~~~~~~----~~~v~w~~~~--~~~~----------~--~---------~~~~l~~~~~~~~d~g~y~C~~ 53 (119)
.|+.|+|.|.+.+.+ .+.+.|+|+. ..+. . . ....|.|.+++.+|+|.|.|.+
T Consensus 15 ~G~~v~L~C~~~~~~~~~~~~~i~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~D~G~Y~C~~ 94 (240)
T 1moe_A 15 LGQRATMSCRAGESVDIFGVGFLHWYQQKPGQPPKLLIYRASNLESGIPVRFSGTGSRTDFTLIIDPVEADDVATYYCQQ 94 (240)
T ss_dssp TTSCEEEEEEESSCCEETTEECEEEEEECTTSCCEEEEETTTEECTTCCTTEEEEEETTEEEEEESSCCGGGCEEEEEEE
T ss_pred CCCCEEEEEeCCCccccCCCceEEEEEECCCCCceEEEEEecccCcCCCccEEEEecCCeEEEEEcCCChhhCEEEEEEE
Confidence 489999999999887 7789999853 2110 0 0 1126999999999999999999
Q ss_pred EcCCCC-ceeEeeEEEeeec---CCCeeeecCCccccCCCCcEEEEeEEccCCC--CeEEEEEC
Q psy12725 54 RNEQES-AQASGELKLGGRF---DPPVIKESFSDETLNPGPNYYFKCIASGNPT--PEISWYLD 111 (119)
Q Consensus 54 ~~~~~~-~~~~~~~~v~~~~---~~~~~~~~~~~~~~~~g~~~~l~C~~~~~p~--~~~~W~~~ 111 (119)
.+..+. ......+.|.... .++.....+....+.+|+.+.|.|.+.+.|. +.+.|+++
T Consensus 95 ~n~~~~~~~~~~~l~V~~~~~~~~~~~~~~~~~~~~v~~G~~v~L~C~~~g~p~~~~~v~W~k~ 158 (240)
T 1moe_A 95 TNEDPYTFGGGTKLEIKGGGSGGGGEVQLQQSGAELVEPGASVKLSCTASGFNIKDTYMHWVKQ 158 (240)
T ss_dssp CSSSSCCBCCCEEEEECCCSCCCCCCCEEEECCCEEECTTCCEEEEEEEESSCGGGSCEEEEEE
T ss_pred ccCCceeecCCEEEEEecCCCCCCceEEEeCCCceEEeCCCcEEEEEEEcCccCCCCEEEEEEE
Confidence 987433 2233445543321 1122333344556889999999999988763 58999985
No 144
>4i0k_A CD276 antigen; immunoglobulin domain, glycoprotein, immunity, adaptive IMMU structural genomics, protein structure initiative; HET: NAG BMA MAN; 2.97A {Mus musculus}
Probab=99.74 E-value=1e-17 Score=94.55 Aligned_cols=113 Identities=20% Similarity=0.444 Sum_probs=77.7
Q ss_pred CCccEEEEEEeccCCC-----CeeEEeeCCccC---------------CC----C------CCCeEEEecCCCCCCeEEE
Q psy12725 1 MLALKFFTCKYEGNPV-----KTISWMKDGKPV---------------PD----H------NEPVFRIDSVRKEDKGMYQ 50 (119)
Q Consensus 1 ~g~~~~l~c~~~~~~~-----~~v~w~~~~~~~---------------~~----~------~~~~l~~~~~~~~d~g~y~ 50 (119)
+|+.+.|.|.+.+.+. +.+.|++++... .. . ....|.|.+++..|+|.|.
T Consensus 9 ~G~~v~L~C~~~~~~~~~~~~~~v~W~~~~~~~~i~~~~~~~~~~~~~~~r~~~~~~~~~~~~~sL~I~~v~~~D~G~Y~ 88 (222)
T 4i0k_A 9 VDTDATLRCSFSPEPGFSLAQLNLIWQLTDTKQLVHSFTEGRDQGSAYSNRTALFPDLLVQGNASLRLQRVRVTDEGSYT 88 (222)
T ss_dssp TTSCEEECCBCCCCTTCCTTTEEEEEEETTTCCEEEEEETTEEEEESSCSCEECCTTTGGGTBCCEEECSCCGGGCSCEE
T ss_pred CCCCeEEEEEecCCCCCCCCceEEEEEECCCccEEEEEcCCcccccceeCcEEEecccccCCeEEEEECCcccccCEEEE
Confidence 4899999999887643 689999976432 00 0 1567999999999999999
Q ss_pred EEEEcCCCCceeEeeEEEeeecCCCeeeecCCccccCCCCcEEEEeEE-ccCCCCeEEEEE-CCEEc
Q psy12725 51 CVIRNEQESAQASGELKLGGRFDPPVIKESFSDETLNPGPNYYFKCIA-SGNPTPEISWYL-DGKKL 115 (119)
Q Consensus 51 C~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~g~~~~l~C~~-~~~p~~~~~W~~-~~~~~ 115 (119)
|.+.+.. .......+.+.....+|.+...+ ...+..|+.+.|.|.+ .+.|.+.+.|++ ++..+
T Consensus 89 C~~~~~~-~~~~~~~l~V~~~~~~p~i~~~~-~~~v~~G~~~~l~C~~~~g~P~~~v~W~~~~~~~~ 153 (222)
T 4i0k_A 89 CFVSIQD-FDSAAVSLQVAAPYSKPSMTLEP-NKDLRPGNMVTITCSSYQGYPEAEVFWKDGQGVPL 153 (222)
T ss_dssp EEEEECC-CCCCCCCCCCCBCCCCCEEECCC------CCSEEEEEEEEEEEBSCCEEEEECTTSCBC
T ss_pred EEEEeCC-CceEEEEEEEEcCCCCCcEEeCC-CceecCCceEEEEEecccccCCCeEEEEcCCCccC
Confidence 9999753 33334444444333345555433 3356789999999998 788999999998 45443
No 145
>3p3y_A Neurofascin; IG domains, cell adhesion; HET: NAG; 2.60A {Homo sapiens} PDB: 3p40_A*
Probab=99.73 E-value=1.5e-17 Score=100.87 Aligned_cols=112 Identities=24% Similarity=0.429 Sum_probs=79.4
Q ss_pred CCccEEEEEEeccCCCCeeEEeeCCccCCC---------CCCCeEEEe----cCCCCCCeEEEEEEEcCCCCceeEeeEE
Q psy12725 1 MLALKFFTCKYEGNPVKTISWMKDGKPVPD---------HNEPVFRID----SVRKEDKGMYQCVIRNEQESAQASGELK 67 (119)
Q Consensus 1 ~g~~~~l~c~~~~~~~~~v~w~~~~~~~~~---------~~~~~l~~~----~~~~~d~g~y~C~~~~~~~~~~~~~~~~ 67 (119)
.|+.+.|.|.+.+.|.+.+.|+|++..+.. .....+.+. +++.+|.|.|.|.+.+..+... +..+.
T Consensus 31 ~G~~v~l~C~~~g~p~~~v~W~k~g~~l~~~~~~~~~~~~~~~~l~i~~~~~~~~~~D~G~Y~C~a~n~~g~~~-s~~~~ 109 (404)
T 3p3y_A 31 PRDNILIECEAKGNPAPSFHWTRNSRFFNIAKDPRVSMRRRSGTLVIDFRSGGRPEEYEGEYQCFARNKFGTAL-SNRIR 109 (404)
T ss_dssp SSSCCCCCEEECCSSCCEEEEEETTEECCGGGCSSCBCCSSSCCCBCCCTTTCCTTSSCEEEEEEEECSSCEEE-EEEEE
T ss_pred CCCCEEEEEEecCCCCCeEEEEECCEEeeeecCCcceEecCCceEEEEeccCCCCccCCEEEEEEEEcCCCeEe-eeeEE
Confidence 388999999999989999999999976532 123444443 6778999999999999865432 23333
Q ss_pred EeeecCCCeeeecCCccccCCCCcEEEEeEE-ccCCCCeEEEEECCE
Q psy12725 68 LGGRFDPPVIKESFSDETLNPGPNYYFKCIA-SGNPTPEISWYLDGK 113 (119)
Q Consensus 68 v~~~~~~~~~~~~~~~~~~~~g~~~~l~C~~-~~~p~~~~~W~~~~~ 113 (119)
+.+...+...........+.+|+.+.|.|.+ .+.|.+.+.|++++.
T Consensus 110 l~V~~~p~~~~~~~~~~~v~~G~~v~l~C~~~~~~p~~~v~W~~~~~ 156 (404)
T 3p3y_A 110 LQVSKSPLWPKENLDPVVVQEGAPLTLQCNPPPGLPSPVIFWMSSSM 156 (404)
T ss_dssp EEECCCCCCCCCCCCCEEEETTSCEEECCCCCCCSSCCEEEEECTTS
T ss_pred EEEeccCccccCCCCCeEEccCCcEEEEeCCCCCCCCCeEEEeCCCc
Confidence 3332222222222334567899999999998 777888999999864
No 146
>1ry7_B FGFR-3, fibroblast growth factor receptor 3; FGF-FGFR complex, beta trefoil, IG domain, growth factor/growth factor receptor complex; 3.20A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4
Probab=99.73 E-value=4.5e-19 Score=105.38 Aligned_cols=116 Identities=22% Similarity=0.418 Sum_probs=31.2
Q ss_pred CCccEEEEEEeccC-CCCeeEEeeCCccCCCC-----CCCeEEEecCCCCCCeEEEEEEEcCCCCceeEeeEEEeeec--
Q psy12725 1 MLALKFFTCKYEGN-PVKTISWMKDGKPVPDH-----NEPVFRIDSVRKEDKGMYQCVIRNEQESAQASGELKLGGRF-- 72 (119)
Q Consensus 1 ~g~~~~l~c~~~~~-~~~~v~w~~~~~~~~~~-----~~~~l~~~~~~~~d~g~y~C~~~~~~~~~~~~~~~~v~~~~-- 72 (119)
.|+.+.|.|.+.+. |.+.+.|++++..+... ....|.|.+++.+|.|.|.|.+.+. +.......+.+....
T Consensus 22 ~G~~v~l~C~~~~~~p~~~v~W~k~g~~~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~a~n~-~~~~~~~~l~V~~~~~~ 100 (334)
T 1ry7_B 22 SGDAVELSCPPPGGGPMGPTVWVKDGTGLVPSERVLVGPQRLQVLNASHEDSGAYSCRQRLT-QRVLCHFSVRVTDAPSS 100 (334)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred cCCcEEEEeeCCCCCCCcceEEEECCeeCCCcccEEeccceEEEeecccccCEEEEEEEEeC-CeEEEEEEEEEeccCcc
Confidence 38899999999876 57899999998876432 3467899999999999999999987 443334444443210
Q ss_pred -----------------CCCeeeecC----CccccCCCCcEEEEeEEccCCCCeEEEEECCEEccc
Q psy12725 73 -----------------DPPVIKESF----SDETLNPGPNYYFKCIASGNPTPEISWYLDGKKLVN 117 (119)
Q Consensus 73 -----------------~~~~~~~~~----~~~~~~~g~~~~l~C~~~~~p~~~~~W~~~~~~~~~ 117 (119)
.+|.+.... ....+..|+.+.|.|.+.+.|.+.+.|++++..+..
T Consensus 101 ~~~~~~~~~~~~~~~~~~~p~~~~p~~~~~~~~~v~~g~~v~l~C~~~g~p~~~v~W~~~~~~~~~ 166 (334)
T 1ry7_B 101 GDDEDGEDEAEDTGVDTGAPYWTRPERMDKKLLAVPAANTVRFRCPAAGNPTPSISWLKNGREFRG 166 (334)
T ss_dssp ------------------CCCCSCCTTCCCCEEEEETTCCEEEECCCCCSSCCEEECCBTTBCCCT
T ss_pred ccccccccccccccccCCCCEEeccccccceeEEecCCCcEEEEEEccCCCCCeEEEEECCEECcc
Confidence 123222111 123466899999999999999999999999887653
No 147
>2v5m_A Dscam; neurobiology SPL immunoglobulin domain, cell adhesion, membrane, development protein; HET: NAG; 1.95A {Drosophila melanogaster} PDB: 2v5s_A* 2v5r_A*
Probab=99.73 E-value=2.3e-17 Score=99.68 Aligned_cols=112 Identities=24% Similarity=0.424 Sum_probs=83.6
Q ss_pred CccEEEEEEeccCCCCeeEEee-CCccCCC-------CCCCeEEEecCCCCC------CeEEEEEEEcCCCCceeEeeEE
Q psy12725 2 LALKFFTCKYEGNPVKTISWMK-DGKPVPD-------HNEPVFRIDSVRKED------KGMYQCVIRNEQESAQASGELK 67 (119)
Q Consensus 2 g~~~~l~c~~~~~~~~~v~w~~-~~~~~~~-------~~~~~l~~~~~~~~d------~g~y~C~~~~~~~~~~~~~~~~ 67 (119)
|+.+.|.|.+.+.|.+.|.|++ ++..+.. .....|.|.+++..| .|.|.|.+.+..+... +..+.
T Consensus 19 G~~v~l~C~~~g~p~p~v~W~k~~g~~~~~~~~~~~~~~~~~L~i~~~~~~d~~~~~d~G~Y~C~a~n~~g~~~-s~~~~ 97 (388)
T 2v5m_A 19 STGAEIECKASGNPMPEIIWIRSDGTAVGDVPGLRQISSDGKLVFPPFRAEDYRQEVHAQVYACLARNQFGSII-SRDVH 97 (388)
T ss_dssp TTCEEEECEEEEESCCEEEEEETTSCBCCCBTTTBEECSTTEEEECCCCGGGCCHHHHEEEEEEEEEETTEEEE-CCCEE
T ss_pred CccEEEEEECCCCCCCEEEEEcCCCCccccCCCceEEcCCceEEecccChhhccccccCceEEEEEEccCCeEE-ecceE
Confidence 7899999999998999999999 7776543 245689999999887 9999999999865321 22333
Q ss_pred EeeecCCCeeeecCCccccCCCCcEEEEeEEccCCC---CeEEEEECCEEc
Q psy12725 68 LGGRFDPPVIKESFSDETLNPGPNYYFKCIASGNPT---PEISWYLDGKKL 115 (119)
Q Consensus 68 v~~~~~~~~~~~~~~~~~~~~g~~~~l~C~~~~~p~---~~~~W~~~~~~~ 115 (119)
+.+. .+|.+...+....+.+|+.+.|.|.+.+.+. +.+.|++++..+
T Consensus 98 v~v~-~~p~~~~~~~~~~v~~G~~v~l~C~~~~~~~~~~~~v~W~~~~~~~ 147 (388)
T 2v5m_A 98 VRAV-VAQYYEADVNKEHVIRGNSAVIKCLIPSFVADFVEVVSWHTDEEEN 147 (388)
T ss_dssp EEEE-CCCCCCCBCCCEEEETTSCEEECCBCCTTTTTTEEEEEEEETTCCE
T ss_pred EEEc-cccccccCccceeeecCCcEEEEEECcCCCCCCcceEEEEeCCCcc
Confidence 3332 3444444455556789999999999877643 689999987654
No 148
>1i1c_A IGG2A, IG gamma-2A chain C region; FC, immune system; HET: NAG FUL BMA MAN FUC; 2.70A {Rattus norvegicus} SCOP: b.1.1.2 b.1.1.2 PDB: 1i1a_D*
Probab=99.73 E-value=9.7e-18 Score=96.05 Aligned_cols=116 Identities=14% Similarity=0.170 Sum_probs=78.9
Q ss_pred CCccEEEEEEeccC---CCC-eeEEeeCCccCCCC--------C------CCeEEEecCCCCCCeEEEEEEEcCCCCcee
Q psy12725 1 MLALKFFTCKYEGN---PVK-TISWMKDGKPVPDH--------N------EPVFRIDSVRKEDKGMYQCVIRNEQESAQA 62 (119)
Q Consensus 1 ~g~~~~l~c~~~~~---~~~-~v~w~~~~~~~~~~--------~------~~~l~~~~~~~~d~g~y~C~~~~~~~~~~~ 62 (119)
.|+.++|.|.+.+. |.+ .|.|+|++..+... . ...|.|..++..|.|.|.|.+.+..+....
T Consensus 31 ~G~~v~L~C~~~g~~~~P~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~s~L~I~~~~~~D~g~Y~C~~~~~~~~~~~ 110 (239)
T 1i1c_A 31 GGLTPKVTCVVVDISQNDPEVRFSWFIDDVEVHTAQTHAPEKQSNSTLRSVSELPIVERDWLNGKTFKCKVNSGAFPAPI 110 (239)
T ss_dssp SSSCCEEEEEEEEECTTCCCCEEEEEESSCEECCCEECCCEECTTSCEEEEEEEECCHHHHHTTCCEEEEEECSSSSSCE
T ss_pred cCCcEEEEEEEecCccCCCCCEEEEEECCccccCcccccceEcCCCcEEEEEEEEEEhhHccCCCeEEEEEecccCCCCc
Confidence 48999999999876 655 89999987544210 1 135777778888999999999998654322
Q ss_pred EeeEEE-eeecCCCeeeecCCccccCCCCcEEEEeEEccC-CC-CeEEEEECCEEcc
Q psy12725 63 SGELKL-GGRFDPPVIKESFSDETLNPGPNYYFKCIASGN-PT-PEISWYLDGKKLV 116 (119)
Q Consensus 63 ~~~~~v-~~~~~~~~~~~~~~~~~~~~g~~~~l~C~~~~~-p~-~~~~W~~~~~~~~ 116 (119)
...+.+ .....+|.+...+.......|+.+.|.|.+.+. |. ..+.|++||..+.
T Consensus 111 ~~~v~~~~~~~~~P~v~v~~~~~~~~~g~~~~L~C~~~g~~P~~~~v~W~k~g~~l~ 167 (239)
T 1i1c_A 111 EKSISKPEGTPRGPQVYTMAPPKEEMTQSQVSITCMVKGFYPPDIYTEWKMNGQPQE 167 (239)
T ss_dssp EEEECCCSSCCBCCEEEEECCCGGGGGSSEEEEEEEEEEEBSSCCEEEEEETTEECS
T ss_pred EEEEecCCCCCcCCEEEEECCChHHhcCCcEEEEEEEeeeECCCeEEEEEECCEECC
Confidence 222211 011245666554443333457889999999885 44 3799999999875
No 149
>1qgc_4 Protein (immunoglobulin); virus-antibody complex, icosahedral virus, virus-immune SYST complex; 30.00A {Mus musculus} SCOP: i.6.1.1
Probab=99.73 E-value=2.3e-17 Score=101.16 Aligned_cols=116 Identities=18% Similarity=0.336 Sum_probs=81.9
Q ss_pred CCccEEEEEEeccCC--CCeeEEeeC--CccCC-------------------C---------CCCCeEEEecCCCCCCeE
Q psy12725 1 MLALKFFTCKYEGNP--VKTISWMKD--GKPVP-------------------D---------HNEPVFRIDSVRKEDKGM 48 (119)
Q Consensus 1 ~g~~~~l~c~~~~~~--~~~v~w~~~--~~~~~-------------------~---------~~~~~l~~~~~~~~d~g~ 48 (119)
.|+.+.|.|.+.+.| .+.+.|+|+ +..+. . .....|.|.+++.+|.|.
T Consensus 232 ~G~~v~L~C~~~g~p~~~~~v~W~k~~~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~I~~v~~~D~G~ 311 (438)
T 1qgc_4 232 PGGSLKLSCTASGFIFNRCAMSWVRQTPEKRLEWVATISSGGTYTYYPDSVKGRFTISRDNAKNTLYLQMSSLRSADTAM 311 (438)
T ss_dssp TTCCEEEEEEEESSCGGGSCEEEEEEETTTEEEEEEEECTTSCCEECCGGGTTTEEEEEETTTTEEEEEECSCCGGGCCE
T ss_pred cCCcEEEEEEEcccccCCcEEEEEECCCCCCcEEEEEEeecCCceecCcccCCcEEEEeecCCCeEEEEECCCChhhCEE
Confidence 489999999999887 678999986 33221 0 012379999999999999
Q ss_pred EEEEEEcCCC-----CceeEeeEEEeee-cCCCeeeecCCccccCCCCcEEEEeEEccC-CCC-eEEEEECCEEcc
Q psy12725 49 YQCVIRNEQE-----SAQASGELKLGGR-FDPPVIKESFSDETLNPGPNYYFKCIASGN-PTP-EISWYLDGKKLV 116 (119)
Q Consensus 49 y~C~~~~~~~-----~~~~~~~~~v~~~-~~~~~~~~~~~~~~~~~g~~~~l~C~~~~~-p~~-~~~W~~~~~~~~ 116 (119)
|.|.+.|..+ .......+.+... ..+|.+...+....+..|+.+.|.|.+.+. |.+ .+.|+++|..+.
T Consensus 312 Y~C~a~n~~~~~~~~~~~~~~~l~V~~~~~~~P~v~~~~~~~~~~~g~~v~L~C~~~g~~P~~~~v~W~~~g~~~~ 387 (438)
T 1qgc_4 312 YYCVRREDGGDEGFAYWGQGTVVTVSAAKTTPPSVYPLAPGSAAAAASMVTLGCLVKGYFPEPVTVTWNSGSLSSG 387 (438)
T ss_dssp EEEEECCSSSCCCCCSBCCCEEEEECSSCCBCCEEEEECCCGGGCCSSEEEEEEEEESCBSSCCEEEEGGGTCCSS
T ss_pred EEEEEEccCCCccceeeCCCEEEEEecCCCCCCeEEEcCcccccccCCcEEEEEEeccccCCCcEEEEecCCCCCc
Confidence 9999998432 2223344444321 124555444444457789999999999887 777 899999987654
No 150
>2dru_A Chimera of CD48 antigen and T-cell surface antige; CD2 binding domain of CD48, immune system; HET: NAG; 2.60A {Rattus norvegicus}
Probab=99.73 E-value=6.5e-17 Score=89.05 Aligned_cols=106 Identities=19% Similarity=0.249 Sum_probs=73.5
Q ss_pred CCccEEEEEEecc-CCCCeeEEeeC-Ccc------------CCC---------CCCCeEEEecCCCCCCeEEEEEEEcCC
Q psy12725 1 MLALKFFTCKYEG-NPVKTISWMKD-GKP------------VPD---------HNEPVFRIDSVRKEDKGMYQCVIRNEQ 57 (119)
Q Consensus 1 ~g~~~~l~c~~~~-~~~~~v~w~~~-~~~------------~~~---------~~~~~l~~~~~~~~d~g~y~C~~~~~~ 57 (119)
+|+.|+|.|...+ .+.+.|.|++. +.. ... ....+|.|.+++..|+|.|.|.+.+..
T Consensus 13 ~G~~vtL~c~~~~~~~~~~i~W~k~~~~~i~~~~~~~~~~~~~~~~~~R~~l~~~~~sL~I~~v~~~D~G~Y~C~v~~~~ 92 (180)
T 2dru_A 13 TGSNVTLTILKHPLASYQRLTWLHTTNQKILEYFPNGKKTVFESVFKDRVDLDKTNGALRIYNVSKEDRGDYYMRMLHET 92 (180)
T ss_dssp TTSCEEECCCSSCCCSCSEEEEESSSSCEEEEECSSSCEEECSSTTTTTEEECTTTCCEEECSCCGGGCEEEEEEEESSS
T ss_pred eCCCEEEeCCCCCCCceeEEEEEecCCeEEEEEECCCCeeEcchhcCCeEEEeCCCccEEEcCCCHHHCeEEEEEEEcCC
Confidence 4899999999854 24679999984 211 100 234679999999999999999998765
Q ss_pred CCceeEeeEEEeeecCCCeeeecCCccccCCCCcEEEEeEE-ccCCCCeEEEEECCEEcc
Q psy12725 58 ESAQASGELKLGGRFDPPVIKESFSDETLNPGPNYYFKCIA-SGNPTPEISWYLDGKKLV 116 (119)
Q Consensus 58 ~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~g~~~~l~C~~-~~~p~~~~~W~~~~~~~~ 116 (119)
.......+.|......|.+.. .+..+.|.|.+ .+ |.|.+.|++++..+.
T Consensus 93 -~~~~~~~L~V~~~~~~P~i~~--------~~~~v~L~C~~~~g-p~p~i~W~~~~~~l~ 142 (180)
T 2dru_A 93 -EDQWKITMEVYEMVSKPMIYW--------ECSNATLTCEVLEG-TDVELKLYQGKEHLR 142 (180)
T ss_dssp -EEEEEEEEEEECCCCCCEEEE--------EGGGTEEEEECSSC-TTCEEEEEETTEEEE
T ss_pred -eEEEEEEEEEECCCCCCEEEe--------cCCCEEEEEEeCCC-CCCEEEEEECCeECc
Confidence 333344455543223344332 22459999999 55 888999999998764
No 151
>1nqb_A Single-chain antibody fragment; multivalent antibody, diabody, domain SWA immunoglobulin; 2.00A {Mus musculus} SCOP: b.1.1.1 b.1.1.1 PDB: 1lmk_A 1qnz_H
Probab=99.73 E-value=5.3e-17 Score=93.74 Aligned_cols=112 Identities=17% Similarity=0.267 Sum_probs=77.9
Q ss_pred CCccEEEEEEeccCC--CCeeEEeeCC--ccC-------------------CC---------CCCCeEEEecCCCCCCeE
Q psy12725 1 MLALKFFTCKYEGNP--VKTISWMKDG--KPV-------------------PD---------HNEPVFRIDSVRKEDKGM 48 (119)
Q Consensus 1 ~g~~~~l~c~~~~~~--~~~v~w~~~~--~~~-------------------~~---------~~~~~l~~~~~~~~d~g~ 48 (119)
.|+.|+|.|.+.+.+ .+.+.|+|++ ..+ .. .....|.|.+++.+|+|.
T Consensus 14 ~G~~v~L~C~~~g~~~~~~~v~W~r~~~~~~~~~l~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~~L~I~~v~~~DsG~ 93 (256)
T 1nqb_A 14 PGASVKLSCKASGYTFTSYWMHWVKQRPGRGLEWIGRIDPNSGGTKYNEKFKSKATLTVDKPSSTAYMQLSSLTSEDSAV 93 (256)
T ss_dssp TTCCEEEEEEECSSCGGGSCEEEEEEETTTEEEEEEEECTTTCCEEECGGGTTTEEEEEETTTTEEEEEECSCCGGGCEE
T ss_pred CCCcEEEEEEeccccCCCceEEEEEECCCCCcEEEEEEecCCCceeeCcccCCeEEEEEecCCCEEEEEECcCChhhCEE
Confidence 489999999998765 5789999842 111 00 012479999999999999
Q ss_pred EEEEEEcCCCC---ceeEeeEEEeeecCCCeeeecCCccccCCCCcEEEEeEEccCCCC-----eEEEEE--CCE
Q psy12725 49 YQCVIRNEQES---AQASGELKLGGRFDPPVIKESFSDETLNPGPNYYFKCIASGNPTP-----EISWYL--DGK 113 (119)
Q Consensus 49 y~C~~~~~~~~---~~~~~~~~v~~~~~~~~~~~~~~~~~~~~g~~~~l~C~~~~~p~~-----~~~W~~--~~~ 113 (119)
|.|.+.+..+. ......+.+.+. .++.+...+....+.+|+.+.|.|.+.+.+.+ .+.|++ ++.
T Consensus 94 Y~C~~~n~~g~~~~~~~~~~~~L~V~-~~~~v~~~p~~~~v~~G~~v~L~C~~~~~~~~~~~~~~v~W~k~~~g~ 167 (256)
T 1nqb_A 94 YYCARYDYYGSSYFDYWGQGTTVTVS-SDIELTQTPLSLPVSLGDQASISCRSSQSIVHSNGNTYLEWYLQKPGQ 167 (256)
T ss_dssp EEEEECCTTSSSSCSEECCCEEEEEC-CCCCEEEECSEEEECTTCCEEEEEEESSCCBCTTSCBCEEEEEECTTS
T ss_pred EEEEEeeccCccceeEEcCceeeeec-ccccEEecCcEEEEecCCcEEEEeEecCcccccccceEEEEEEECCCC
Confidence 99999987442 111112233332 34555555555568899999999999888765 899998 554
No 152
>4fqp_A Poliovirus receptor; immunoglobulin-like domain, IG domain, viral entry receptor, adhesion; HET: NAG BMA FUC MAN; 3.60A {Homo sapiens} PDB: 1nn8_R 1dgi_R
Probab=99.73 E-value=2.7e-17 Score=97.12 Aligned_cols=114 Identities=18% Similarity=0.257 Sum_probs=82.6
Q ss_pred CccEEEEEEec-cCCCCeeEEeeCCccCCC-------CCC-----CeEEEecCCCCCCeEEEEEEEcCCCCceeEeeEEE
Q psy12725 2 LALKFFTCKYE-GNPVKTISWMKDGKPVPD-------HNE-----PVFRIDSVRKEDKGMYQCVIRNEQESAQASGELKL 68 (119)
Q Consensus 2 g~~~~l~c~~~-~~~~~~v~w~~~~~~~~~-------~~~-----~~l~~~~~~~~d~g~y~C~~~~~~~~~~~~~~~~v 68 (119)
|+.+.+.|... +.|.+.+.|++++..+.. ..+ +.|.+......|.|.|+|.+.|..+.......+.+
T Consensus 132 ~~~~~~~C~~~~~~P~~~i~W~~~~~~~~~~~~~~~~~~~~~~~~s~l~i~~~~~~d~g~Y~C~a~n~~~~~~~~~~~~l 211 (313)
T 4fqp_A 132 EPVPMARCVSTGGRPPAQITWHSDLGGMPNTSQVPGFLSGTVTVTSLWILVPSSQVDGKNVTCKVEHESFEKPQLLTVNL 211 (313)
T ss_dssp SCEEEEEEEEEEEBSCCEEEEEETTCCEEEEEEEECSSTTCEEEEEEEEECCCGGGTTCEEEEEEECTTSSSCEEEEEEC
T ss_pred CceEEEEEEccCccCCcEEEeecCCccccccceeeeecccccccceeeeecccccccCeeEEEEEEccCcCccceeeeec
Confidence 56677888765 668899999998765532 111 24777777888999999999998666555555555
Q ss_pred eeecCCCeeeecCC-ccccCCCCcEEEEeEEccCCCC-eEEEEECCEEcc
Q psy12725 69 GGRFDPPVIKESFS-DETLNPGPNYYFKCIASGNPTP-EISWYLDGKKLV 116 (119)
Q Consensus 69 ~~~~~~~~~~~~~~-~~~~~~g~~~~l~C~~~~~p~~-~~~W~~~~~~~~ 116 (119)
.+. .+|.+...+. ...+.+|+.+.|.|.+.|.|.| .+.|+++|..+.
T Consensus 212 ~V~-~~P~v~~~~~~~~~~~~g~~v~l~C~~~g~P~p~~v~W~~~~~~l~ 260 (313)
T 4fqp_A 212 TVY-YPPEVSISGYDNNWYLGQNEATLTCDARSNPEPTGYNWSTTMGPLP 260 (313)
T ss_dssp CBC-EEEEEEEECCCSCEETTCCCEEEEEEEEEESCCCEEEEEETTBSCC
T ss_pred ccc-cCCccccccccceeecCCCeEEEEEEecCCCCCcEEEEEECCEECC
Confidence 443 3566554333 3346678999999999999988 699999987664
No 153
>3pl6_D MBP peptide / T-cell receptor beta chain chimera; TCR-MHC complex, immunoglobulin fold, immune receptor, membr immune system; HET: NAG; 2.55A {Homo sapiens}
Probab=99.73 E-value=3.7e-17 Score=94.76 Aligned_cols=116 Identities=16% Similarity=0.324 Sum_probs=77.7
Q ss_pred CCccEEEEEEeccCCCCeeEEeeC--CccC------------------------C--CCCCCeEEEecCCCCCCeEEEEE
Q psy12725 1 MLALKFFTCKYEGNPVKTISWMKD--GKPV------------------------P--DHNEPVFRIDSVRKEDKGMYQCV 52 (119)
Q Consensus 1 ~g~~~~l~c~~~~~~~~~v~w~~~--~~~~------------------------~--~~~~~~l~~~~~~~~d~g~y~C~ 52 (119)
.|+.|+|.|.+. .+.+.+.|||. +... . ......|.|.+++.+|+|.|.|.
T Consensus 40 ~G~~v~L~C~~~-~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~sL~I~~v~~~D~G~Y~C~ 118 (268)
T 3pl6_D 40 KGKYVELRCDPI-SGHTALYWYRQSLGQGPEFLIYFQGTGAADDSGLPNDRFFAVRPEGSVSTLKIQRTERGDSAVYLCA 118 (268)
T ss_dssp TTCCEEEEEBCB-TTCCEEEEEEECTTSCCEEEEEEETTEEEECTTCCSTTEEEECTTSSSEEEEECSCCGGGCEEEEEE
T ss_pred CCCCEEEEEEeC-CCCceEEEEEECCCCCcEEEEEECCCCccccCCCccCcEEEEecCCCEEEEEECCCCcccCEEEEEE
Confidence 489999999986 47789999982 1110 0 01245799999999999999999
Q ss_pred EEcCC--CCceeEeeEEEee---ecCCCeeeec-CCccccCCCCcEEEEeEEccCCCC--eEEEEECCEEccc
Q psy12725 53 IRNEQ--ESAQASGELKLGG---RFDPPVIKES-FSDETLNPGPNYYFKCIASGNPTP--EISWYLDGKKLVN 117 (119)
Q Consensus 53 ~~~~~--~~~~~~~~~~v~~---~~~~~~~~~~-~~~~~~~~g~~~~l~C~~~~~p~~--~~~W~~~~~~~~~ 117 (119)
+.+.. ........+.+.. ...+|.+... +....+..|+.+.|.|.+.+.+++ .+.|+++|..+..
T Consensus 119 ~~~~~~~~~~~~~~~l~V~~~~~~~~~P~v~~~~~~~~~~~~g~~v~L~C~~~g~~p~~~~v~W~~~g~~l~~ 191 (268)
T 3pl6_D 119 TSALGDTQYFGPGTRLTVLEDLKNVFPPEVAVFEPSEAEISHTQKATLVCLATGFYPDHVELSWWVNGKEVHS 191 (268)
T ss_dssp EESSSSSCEECCCEEEEEESCGGGCBCCEEEEECCCHHHHHHHSEEEEEEEEEEEBSSCEEEEEEESSSEECT
T ss_pred EecCCCceeeCCcEEEEEecCcccccCCceEEeCCCcccccCCCceEEEEEECcccCCCeEEEEEECCEECCC
Confidence 99742 1222233444432 1124544433 333345568999999999886554 8999999988753
No 154
>1igt_B IGG2A intact antibody - MAB231; intact immunoglobulin V region C region, immunoglobulin; HET: NAG FUL BMA MAN GAL FUC; 2.80A {Mus musculus} SCOP: b.1.1.1 b.1.1.2 b.1.1.2 b.1.1.2
Probab=99.73 E-value=5.4e-17 Score=99.88 Aligned_cols=115 Identities=16% Similarity=0.265 Sum_probs=80.3
Q ss_pred CCccEEEEEEeccCC----CCeeEEeeCCccCCCCC--------------CCeEEEecCCCCCCeEEEEEEEcCCCCcee
Q psy12725 1 MLALKFFTCKYEGNP----VKTISWMKDGKPVPDHN--------------EPVFRIDSVRKEDKGMYQCVIRNEQESAQA 62 (119)
Q Consensus 1 ~g~~~~l~c~~~~~~----~~~v~w~~~~~~~~~~~--------------~~~l~~~~~~~~d~g~y~C~~~~~~~~~~~ 62 (119)
.|+.+.|.|.+.+.+ .+.+.|++++..+.... ...|.|..++..|.|.|.|.+.|..+....
T Consensus 254 ~G~~~~L~C~~~g~~~~p~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~L~I~~v~~~d~G~Y~C~a~n~~~~~~~ 333 (444)
T 1igt_B 254 ISLSPIVTCVVVDVSEDDPDVQISWFVNNVEVHTAQTQTHREDYNSTLRVVSALPIQHQDWMSGKEFKCKVNNKDLPAPI 333 (444)
T ss_dssp TTSCCEEEEEEEEECTTCCCCEEEEEETTEECSSTTCBCCEEECSSSEEEEEEEECCHHHHHTTCEEEEEEECTTCSSCE
T ss_pred cCCCcEEEEEEeecccCCCCeEEEEEECCccccCcccccceeCCCCcEEEEEEEEEcHHHhccCCcEEEEEEcCCCCCce
Confidence 489999999998873 36899999987664211 136888888889999999999998765533
Q ss_pred EeeEEEe-eecCCCeeeecCCcc-ccCCCCcEEEEeEEccC-CCC-eEEEEECCEEcc
Q psy12725 63 SGELKLG-GRFDPPVIKESFSDE-TLNPGPNYYFKCIASGN-PTP-EISWYLDGKKLV 116 (119)
Q Consensus 63 ~~~~~v~-~~~~~~~~~~~~~~~-~~~~g~~~~l~C~~~~~-p~~-~~~W~~~~~~~~ 116 (119)
...+.+. ....+|.+...+... .+..| .+.|.|.+.+. |.+ .+.|+++|..+.
T Consensus 334 ~~~v~~~~~~~~~P~v~~~~~~~~~~~~~-~~~L~C~~~g~~P~~~~v~W~k~g~~l~ 390 (444)
T 1igt_B 334 ERTISKPKGSVRAPQVYVLPPPEEEMTKK-QVTLTCMVTDFMPEDIYVEWTNNGKTEL 390 (444)
T ss_dssp EEEEECCCCCCBCCEEEEECCCGGGTTSS-EEEEEEEEEEEBSSCCEEEEEETTEECS
T ss_pred EEEEeccCCCCCCCEEEEeCCChHHccCC-eEEEEEEEEeeeCCCCEEEEEECCEEcc
Confidence 3333220 112466665544332 33444 59999999884 555 899999998774
No 155
>3nfj_J T cell receptor beta chain; immunoglobulin family, immune system; 2.68A {Homo sapiens} PDB: 3hg1_E
Probab=99.73 E-value=4.6e-17 Score=93.24 Aligned_cols=117 Identities=19% Similarity=0.400 Sum_probs=78.3
Q ss_pred CCccEEEEEEeccCCCCeeEEeeCC--ccC----------------C--------CCCCCeEEEecCCCCCCeEEEEEEE
Q psy12725 1 MLALKFFTCKYEGNPVKTISWMKDG--KPV----------------P--------DHNEPVFRIDSVRKEDKGMYQCVIR 54 (119)
Q Consensus 1 ~g~~~~l~c~~~~~~~~~v~w~~~~--~~~----------------~--------~~~~~~l~~~~~~~~d~g~y~C~~~ 54 (119)
.|+.|.|.|.+.+.+.+.+.|||.. ... . .....+|.|.+++.+|+|.|.|.+.
T Consensus 15 ~G~~v~L~C~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~sL~I~~v~~~D~G~Y~C~~~ 94 (245)
T 3nfj_J 15 VGSPLSLECTVEGTSNPNLYWYRQAAGRGLQLLFYSVGIGQISSEVPQNLSASRPQDRQFILSSKKLLLSDSGFYLCAWS 94 (245)
T ss_dssp TTCCEEEEEEEESCSSCEEEEEEESTTSCEEEEEEESSTTCCBCSSCCSSEEEEEETTEEEEEESSCCGGGCEEEEEEEE
T ss_pred CCCCEEEEEEecCCCCceEEEEEECCCCCcEEEEEECCCcccCCccCCcEEEEecCCCEEEEEECCCChhhCEEEEEEEe
Confidence 4899999999998888899999821 100 0 0112369999999999999999999
Q ss_pred cCCC------CceeEeeEEEee---ecCCCeeeecC-CccccCCCCcEEEEeEEccC-CCC-eEEEEECCEEccc
Q psy12725 55 NEQE------SAQASGELKLGG---RFDPPVIKESF-SDETLNPGPNYYFKCIASGN-PTP-EISWYLDGKKLVN 117 (119)
Q Consensus 55 ~~~~------~~~~~~~~~v~~---~~~~~~~~~~~-~~~~~~~g~~~~l~C~~~~~-p~~-~~~W~~~~~~~~~ 117 (119)
+..+ .......+.+.. ...+|.+.... ....+..|+.+.|.|.+.+. |++ .+.|+++|..+..
T Consensus 95 ~~~g~~~~~~~~~~~~~l~V~~~~~~~~~P~v~~~~~~~~~~~~g~~~~l~C~~~g~~p~~~~v~W~k~g~~l~~ 169 (245)
T 3nfj_J 95 VSVGAGVPTIYFGEGSWLTVVEDLNKVFPPEVAVFEPSEAEISHTQKATLVCLATGFFPDHVELSWWVNGKEVHS 169 (245)
T ss_dssp CCTTTSSCCCEECCCEEEEEESCGGGCBCCEEEEEECCHHHHHHHSEEEEEEEEEEEBSSCEEEEEEETTEEECT
T ss_pred eccCCCceeEEECCCeEEEEEcccCCCCCCceEeecCCcccccCCCceEEEEEEccCcCCCEEEEEEECCEECCC
Confidence 8321 111223444432 11245554332 22234568999999999885 444 6899999998754
No 156
>1qgc_4 Protein (immunoglobulin); virus-antibody complex, icosahedral virus, virus-immune SYST complex; 30.00A {Mus musculus} SCOP: i.6.1.1
Probab=99.72 E-value=5.4e-17 Score=99.48 Aligned_cols=117 Identities=18% Similarity=0.294 Sum_probs=81.6
Q ss_pred CCccEEEEEEeccCCC----CeeEEeeCC--ccCC------------CC---------CCCeEEEecCCCCCCeEEEEEE
Q psy12725 1 MLALKFFTCKYEGNPV----KTISWMKDG--KPVP------------DH---------NEPVFRIDSVRKEDKGMYQCVI 53 (119)
Q Consensus 1 ~g~~~~l~c~~~~~~~----~~v~w~~~~--~~~~------------~~---------~~~~l~~~~~~~~d~g~y~C~~ 53 (119)
.|+.+.|.|.+.+.+. +.+.|+|++ ..+. .. ....|.|.+++.+|+|.|.|.+
T Consensus 15 ~G~~v~L~C~~~~~~~~~~~~~v~W~k~~~g~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a 94 (438)
T 1qgc_4 15 LGQRATISCRASESVDSSGHSFMHWYQQKPGQPPKLLIYRASNLESGIPDRFSGSGSRTDFTLTIDPVEADDVATYYCQQ 94 (438)
T ss_dssp TTSCEEEEEEESSCCEETTEECEEEEEECTTSCCEEEESSSSCBCSSCCTTEEEEEETTEEEEEESSCCGGGCEEEEEEE
T ss_pred CCCCEEEEEecCCCcccCCcceEEEEEECCCCCcEEEEEECcccCCCccCcEEEEccCCcEEEEeCCCcCcCCeeEEEEE
Confidence 4899999999987765 489999963 2210 00 1236999999999999999999
Q ss_pred EcCCCCc-eeEeeEEEeeecCCCeeeecCCccccCCCCcEEEEeEEcc-CCCC-eEEEEECCEEccc
Q psy12725 54 RNEQESA-QASGELKLGGRFDPPVIKESFSDETLNPGPNYYFKCIASG-NPTP-EISWYLDGKKLVN 117 (119)
Q Consensus 54 ~~~~~~~-~~~~~~~v~~~~~~~~~~~~~~~~~~~~g~~~~l~C~~~~-~p~~-~~~W~~~~~~~~~ 117 (119)
.+..+.. .....+.+.....+|.+...+......+|+.+.|.|.+.+ .|.+ .+.|+++|..+..
T Consensus 95 ~n~~~~~~~~~~~l~V~~~~~~P~v~~~~~~~~~~~g~~~~l~C~~~g~~p~~~~v~W~k~g~~~~~ 161 (438)
T 1qgc_4 95 SNEVPLTFGAGTKLDLKRADAAPTVSIFPPSSEQLTSGGASVVCFLNNFYPKDINVKWKIDGSERQN 161 (438)
T ss_dssp CSSTTCCBCCCEEEEECCCCBCCEEEEECCCHHHHHTTEEEEEEEEEEEBSSCEEEEEEETTEEECT
T ss_pred ecCCCccccCceeEEecCCCCCCEEEecCCChhhccCCceEEEEEEccccCCCcEEEEEECCEEcCC
Confidence 9875432 2334455533223566665443333345779999999877 5666 8999999988754
No 157
>1wio_A CD4, T-cell surface glycoprotein CD4; immunoglobulin fold, transmembrane, MHC lipoprotein, polymorphism; 3.90A {Homo sapiens} SCOP: b.1.1.1 b.1.1.1 b.1.1.3 b.1.1.3 PDB: 1wip_A 1wiq_A 3t0e_E
Probab=99.72 E-value=3.2e-17 Score=98.55 Aligned_cols=100 Identities=11% Similarity=0.076 Sum_probs=78.6
Q ss_pred CCccEEEEEEecc-----CCCCeeEEeeCCccCCCC-------------------------C--CCeEEEecCCCCCCeE
Q psy12725 1 MLALKFFTCKYEG-----NPVKTISWMKDGKPVPDH-------------------------N--EPVFRIDSVRKEDKGM 48 (119)
Q Consensus 1 ~g~~~~l~c~~~~-----~~~~~v~w~~~~~~~~~~-------------------------~--~~~l~~~~~~~~d~g~ 48 (119)
.|+.+.|.|.+.+ .|.+.+.|++++..+... . ...|.|.+++..|.|.
T Consensus 190 ~G~~v~l~C~~~~~~~~~~P~p~i~W~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~ 269 (363)
T 1wio_A 190 EGEQVEFSFPLAFTVEKLTGSGELWWQAERASSSKSWITFDLKNKEVSVKRVTQDPKLQMGKKLPLHLTLPQALPQYAGS 269 (363)
T ss_dssp TBCCEEEECCCCCCCCSSCEEEEEEEEESSCCCCCCEEEEEECSSCEEEEEEECSSCCBCCSSSSCEEEESSBCGGGCEE
T ss_pred cCCEEEEEEEEecccccCCCceeEEEecCCCCccceEEEEEecCCeeeccccccchhhhcccCCceEEEEccCCcCcCcE
Confidence 3889999998877 677899999998765431 1 3489999999999999
Q ss_pred EEEEEEcC--CCCceeEeeEEEeeecCCCeeeecCCccccCCCCcEEEEeEEccCCCCe--EEEEECCEEcc
Q psy12725 49 YQCVIRNE--QESAQASGELKLGGRFDPPVIKESFSDETLNPGPNYYFKCIASGNPTPE--ISWYLDGKKLV 116 (119)
Q Consensus 49 y~C~~~~~--~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~g~~~~l~C~~~~~p~~~--~~W~~~~~~~~ 116 (119)
|.|.+.|. .+.......+.+.. + .|+.+.|.|.+.+.|.|. +.|++++..+.
T Consensus 270 Y~C~a~n~~~~g~~~~~~~l~V~~------v----------~g~~~~l~C~~~g~p~p~~~i~W~~~~~~~~ 325 (363)
T 1wio_A 270 GNLTLALEAKTGKLHQEVNLVVMR------A----------TQLQKNLTCEVWGPTSPKLMLSLKLENKEAK 325 (363)
T ss_dssp EEEEECBTTTTCCEEEEEEEEEEE------E----------CCCSSSEEEEEESSCCTTCCEEEECSSSSCS
T ss_pred EEEEEEEhhhcCeEEEEEeEEEEE------e----------cCCCeeEEEEEccccCCCccEEEEeCCCcee
Confidence 99999998 76555455555431 1 178899999999998887 99999987664
No 158
>2ocw_A Polymeric-immunoglobulin receptor; SC, secretory, antibody, immunity, immune system; NMR {Homo sapiens} PDB: 3chn_S 3cm9_S 3chn_J 3cm9_J
Probab=99.72 E-value=1.9e-16 Score=100.17 Aligned_cols=110 Identities=17% Similarity=0.244 Sum_probs=81.7
Q ss_pred CCccEEEEEEeccCCCC---eeEEeeCCccCC-------------------------CCCCCeEEEecCCCCCCeEEEEE
Q psy12725 1 MLALKFFTCKYEGNPVK---TISWMKDGKPVP-------------------------DHNEPVFRIDSVRKEDKGMYQCV 52 (119)
Q Consensus 1 ~g~~~~l~c~~~~~~~~---~v~w~~~~~~~~-------------------------~~~~~~l~~~~~~~~d~g~y~C~ 52 (119)
.|+.+.|.|.+.+.+.+ .+.|+|++..+. ......|.|.+++..|.|.|.|.
T Consensus 14 ~G~~v~L~C~~~~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~g~~~L~I~~v~~~D~G~Y~C~ 93 (585)
T 2ocw_A 14 EGNSVSITCYYPPTSVNRHTRKYWCRQGARGGCITLISSEGYVSSKYAGRANLTNFPENGTFVVNIAQLSQDDSGRYKCG 93 (585)
T ss_pred cCCcEEEEEeCCCCcCCCcccEEEEeCCCCCCceEEEECCCcccceeeceEEEEecCCCCEEEEEECCCCcccCEEEEEE
Confidence 48999999999887543 799999875321 00123688999999999999999
Q ss_pred EEcCCCCceeEeeEEEeeecCCCeeeecCCccccCCCCcEEEEeEEccCC-CCeEEEEECCE
Q psy12725 53 IRNEQESAQASGELKLGGRFDPPVIKESFSDETLNPGPNYYFKCIASGNP-TPEISWYLDGK 113 (119)
Q Consensus 53 ~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~g~~~~l~C~~~~~p-~~~~~W~~~~~ 113 (119)
+.+..+.......+.+. .+|.+...+....+.+|+.+.|.|.+.+.+ .+.+.|++++.
T Consensus 94 ~~n~~~~~~~~~~l~V~---~~p~~~~~~~~~~v~~G~~v~l~C~~~~~~~~~~v~W~k~~~ 152 (585)
T 2ocw_A 94 LGINSRGLSFDVSLEVS---QGPGLLNDTKVYTVDLGRTVTINCPFKTENAQKRKSLYKQIG 152 (585)
T ss_pred cccCCCCceEEEEEEEe---cCccccCCCccEEEEcCCCEEEEEEecCCCCCccEEEEECCC
Confidence 98876554444444443 456666666666788999999999998654 56799999874
No 159
>2w59_A IGY FCU3-4; immunoglobulin, avian, immune system; HET: NAG MAN; 1.75A {Gallus gallus}
Probab=99.72 E-value=4.2e-17 Score=92.90 Aligned_cols=115 Identities=13% Similarity=0.214 Sum_probs=76.9
Q ss_pred CCccEEEEEEeccC-CC-C-eeEEeeCCccC-CCC--------CC-----CeEEEecCCCCCCeEEEEEEEcCCCCceeE
Q psy12725 1 MLALKFFTCKYEGN-PV-K-TISWMKDGKPV-PDH--------NE-----PVFRIDSVRKEDKGMYQCVIRNEQESAQAS 63 (119)
Q Consensus 1 ~g~~~~l~c~~~~~-~~-~-~v~w~~~~~~~-~~~--------~~-----~~l~~~~~~~~d~g~y~C~~~~~~~~~~~~ 63 (119)
.|+.++|.|.+.+. |. + .+.|++++..+ ... .+ ..|.|..+...|.|.|+|.+.+..... .
T Consensus 27 ~G~~v~L~C~~~g~~P~~p~~v~W~~~g~~~~~~~~~~~~~~~~g~~~~~s~L~I~~~~~~D~g~Y~C~~~~~~~~~--~ 104 (231)
T 2w59_A 27 ISLDAKLRCLVVNLPSDSSLSVTWTREKSGNLRPDPMVLQEHFNGTYSASSAVPVSTQDWLSGERFTCTVQHEELPL--P 104 (231)
T ss_dssp TSCCCEEEEEEEEESCCTTCEEEEECSSSSCCCCCCCEEEECTTSCEEEEEEEECCHHHHHTTCCEEEEEECTTCSS--C
T ss_pred cCCceEEEEEEeCccCCCCeEEEEEcCCeeccccccccceECCCCcEEEEEEEEecchhccCCCEEEEEEEcCCCCC--c
Confidence 48899999999884 63 4 99999998776 221 11 247777778889999999999876432 2
Q ss_pred eeEEEee---ecCCCeeeecCCccccCCCCcEEEEeEEccC-C-CCeEEEEECCEEccc
Q psy12725 64 GELKLGG---RFDPPVIKESFSDETLNPGPNYYFKCIASGN-P-TPEISWYLDGKKLVN 117 (119)
Q Consensus 64 ~~~~v~~---~~~~~~~~~~~~~~~~~~g~~~~l~C~~~~~-p-~~~~~W~~~~~~~~~ 117 (119)
..+.+.. ...+|.+...........+..+.|.|.+.+. | .+.+.|++||..+..
T Consensus 105 ~~~~v~~~~~~~~~P~v~v~~~~~~~~~~~~~~L~C~~~g~~P~~~~v~W~k~g~~l~~ 163 (231)
T 2w59_A 105 LSKSVYRNTGPTTPPLIYPFAPHPEELSLSRVTLSCLVRGFRPRDIEIRWLRDHRAVPA 163 (231)
T ss_dssp EEEEECCCCSCCBCCEEEEECCCGGGGGSSEEEEEEEEEEEBSSCCEEEEEETTEECCG
T ss_pred eEEEEecCCCCCcCCEEEEeCCCHHHhccCceEEEEEEEeccCCCcEEEEEECCEECCC
Confidence 2333321 1135555443322111234579999999886 4 358999999998754
No 160
>1op3_H FAB 2G12, heavy chain; domain-swapped FAB 2G12, anti-carbohydrate antibody, immune system; HET: MAN; 1.75A {Homo sapiens} SCOP: b.1.1.1 b.1.1.2 PDB: 1om3_H* 1op5_H* 3oay_M* 1zlu_H* 1zlv_H* 1zlw_H* 2oqj_B 1zls_H* 3ob0_H* 3oau_H* 3oaz_H* 3ghe_H 3eyf_B 3eyo_B 3ghb_H 3c2a_H 1q1j_H 2fl5_H*
Probab=99.72 E-value=8.7e-17 Score=91.20 Aligned_cols=114 Identities=13% Similarity=0.289 Sum_probs=77.7
Q ss_pred CCccEEEEEEeccCC--CCeeEEeeCC--ccC-------------------CC---------CCCCeEEEecCCCCCCeE
Q psy12725 1 MLALKFFTCKYEGNP--VKTISWMKDG--KPV-------------------PD---------HNEPVFRIDSVRKEDKGM 48 (119)
Q Consensus 1 ~g~~~~l~c~~~~~~--~~~v~w~~~~--~~~-------------------~~---------~~~~~l~~~~~~~~d~g~ 48 (119)
.|+.|+|.|.+.+.+ .+.+.|||.. ..+ .. .....|.|.+++.+|+|.
T Consensus 14 ~G~~v~L~C~~~~~~~~~~~v~W~r~~~g~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~sL~I~~v~~~D~G~ 93 (225)
T 1op3_H 14 AGGSLILSCGVSNFRISAHTMNWVRRVPGGGLEWVASISTSSTYRDYADAVKGRFTVSRDDLEDFVYLQMHKMRVEDTAI 93 (225)
T ss_dssp TTCCEEEEEEEESSCGGGSCEEEEEECTTSCEEEEEEECGGGCCEEECTTTTTTEEEEEETTTTEEEEEECSCCGGGCEE
T ss_pred CCCCEEEEEEecCcccCCceEEEEEeCCCCCcEEEEEEccCCCccccCcccCCceEEEecCCCCEEEEEECCCChhhCEE
Confidence 489999999998765 6789999843 211 00 012479999999999999
Q ss_pred EEEEEEcCCC-----C---ceeEeeEEEeee-cCCCeeeecCCccccCCCCcEEEEeEEccC-CCC-eEEEEECCEE
Q psy12725 49 YQCVIRNEQE-----S---AQASGELKLGGR-FDPPVIKESFSDETLNPGPNYYFKCIASGN-PTP-EISWYLDGKK 114 (119)
Q Consensus 49 y~C~~~~~~~-----~---~~~~~~~~v~~~-~~~~~~~~~~~~~~~~~g~~~~l~C~~~~~-p~~-~~~W~~~~~~ 114 (119)
|.|.+.+..+ . ......+.|... ..+|.+........+..|+.+.|.|.+.+. |.+ .+.|++++..
T Consensus 94 Y~C~~~~~~~~~~~~~~~~~~~~~~L~V~~~~~~~P~v~~~~~~~~~~~g~~v~L~C~~~g~~P~p~~v~W~~~~~~ 170 (225)
T 1op3_H 94 YYCARKGSDRLSDNDPFDAWGPGTVVTVSPASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALT 170 (225)
T ss_dssp EEEEEECCSSCCSSCCEEEECCCEEEEEESCSCBCCEEEEECCCTTCCCCCEEEEEEEEEEEBSSCCEEECCTTSCC
T ss_pred EEEEEecCCCccccccceeecCCEEEecccCCCcCCeEEEecccccccCCCcEEEEEEEEeEECCCeEEEEecCCCc
Confidence 9999998743 1 112334444321 123554433323345689999999999876 666 8999998865
No 161
>4ei6_B Vbeta16 XV19 type II natural killer T cell recept variable domain, human constant...; natural killer T cell receptor, immune system; 1.60A {Mus musculus} PDB: 4ei5_D 4elk_B 4elm_F* 2esv_E 3ffc_E 3utt_E 3utp_E* 3uts_E 3qjf_B 3qjh_B 3qiw_D* 3qiu_D
Probab=99.72 E-value=1.2e-16 Score=91.49 Aligned_cols=116 Identities=22% Similarity=0.344 Sum_probs=76.6
Q ss_pred CCccEEEEEEeccCCCCeeEEee--------------CCccC-----C---------CCCCCeEEEecCCCCCCeEEEEE
Q psy12725 1 MLALKFFTCKYEGNPVKTISWMK--------------DGKPV-----P---------DHNEPVFRIDSVRKEDKGMYQCV 52 (119)
Q Consensus 1 ~g~~~~l~c~~~~~~~~~v~w~~--------------~~~~~-----~---------~~~~~~l~~~~~~~~d~g~y~C~ 52 (119)
+|+.|.|.| ..+.+.+.+.||| ++... . ......|.|.+++.+|+|.|.|.
T Consensus 16 ~G~~v~L~C-~~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~sL~I~~v~~~D~G~Y~C~ 94 (245)
T 4ei6_B 16 MGQMVTLNC-DPVSNHLYFYWYKQILGQQMEFLVNFYNGKVMEKSKLFKDQFSVERPDGSYFTLKIQPTALEDSAVYFCA 94 (245)
T ss_dssp TTCCEEEEE-ECCTTCCEEEEEEEETTTEEEEEEEEETTEEEEECTTCCTTEEEECCTTSCEEEEECSCCGGGCEEEEEE
T ss_pred CCCCEEEEE-EcCCCCCEEEEEEECCCCCcEEEEEECCCceeccCCCccCCEEEEeccCceEEEEECCCCHhHCEEEEEE
Confidence 489999999 5566788999998 11100 0 01234799999999999999999
Q ss_pred EEcCC----CCceeEeeEEEeee---cCCCeeeec-CCccccCCCCcEEEEeEEccC-CCC-eEEEEECCEEccc
Q psy12725 53 IRNEQ----ESAQASGELKLGGR---FDPPVIKES-FSDETLNPGPNYYFKCIASGN-PTP-EISWYLDGKKLVN 117 (119)
Q Consensus 53 ~~~~~----~~~~~~~~~~v~~~---~~~~~~~~~-~~~~~~~~g~~~~l~C~~~~~-p~~-~~~W~~~~~~~~~ 117 (119)
+.+.. ........+.+... ..+|.+... +....+..|+.+.|.|.+.+. |.+ .+.|+++|..+..
T Consensus 95 ~~~~~~~~~~~~~~~~~l~V~~~~~~~~~p~~~~~~~~~~~~~~g~~v~l~C~~~g~~p~~~~v~W~~~g~~l~~ 169 (245)
T 4ei6_B 95 SSFWGAYAEQFFGPGTRLTVLEDLKNVFPPEVAVFEPSEAEISHTQKATLVCLATGFYPDHVELSWWVNGKEVHS 169 (245)
T ss_dssp EECSSTTCCCEECCCEEEEEESCGGGCBCCEEEEECCCHHHHHHHSEEEEEEEEEEEBSSCEEEEEEETTEEECT
T ss_pred EccCCCcceEEEcCCcEEEEecccCCCCCceEEEeCCCcccccCCCceEEEEEEeeEeCCCeEEEEEECCEECCC
Confidence 98532 11222334444321 124544432 233345568999999999885 444 7999999998764
No 162
>1dee_B IGM RF 2A2; FAB-IBP complex 2.7A resolution binding outside the antigen combining site superantigen FAB VH3 specificity; 2.70A {Homo sapiens} SCOP: b.1.1.1 b.1.1.2 PDB: 1hez_B 1adq_H
Probab=99.72 E-value=2e-16 Score=89.58 Aligned_cols=116 Identities=19% Similarity=0.324 Sum_probs=78.0
Q ss_pred CCccEEEEEEeccCC--CCeeEEeeCC--cc---C----------------CC---------CCCCeEEEecCCCCCCeE
Q psy12725 1 MLALKFFTCKYEGNP--VKTISWMKDG--KP---V----------------PD---------HNEPVFRIDSVRKEDKGM 48 (119)
Q Consensus 1 ~g~~~~l~c~~~~~~--~~~v~w~~~~--~~---~----------------~~---------~~~~~l~~~~~~~~d~g~ 48 (119)
.|+.|+|.|.+.+.+ .+.+.|||.. .. + .. .....|.|.+++.+|+|.
T Consensus 14 ~G~~v~L~C~~~~~~~~~~~v~W~r~~~g~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~sL~I~~v~~~D~G~ 93 (223)
T 1dee_B 14 PGKSLRLSCAASGFTFSGYGMHWVRQAPGKGLEWVALISYDESNKYYADSVKGRFTISRDNSKNTLYLQMNSLRAEDTAV 93 (223)
T ss_dssp TTCCEEEEEEEESSCGGGSCEEEEEECTTSCEEEEEEECTTSCCEEECTTTBTTEEEEEETTTTEEEEEECSCCGGGCEE
T ss_pred CCCcEEEEEEecCcccCCceEEEEEECCCCCcEEEEEEecCCCccccCcccCCeEEEEecCCCCEEEEEECCCCHHHCEE
Confidence 489999999998754 4689999843 11 0 00 012479999999999999
Q ss_pred EEEEEEcCCC---C---ceeEeeEEEee-ecCCCeeeecCCccccCCCCcEEEEeEEccC-CCC-eEEEEE-CCEEcc
Q psy12725 49 YQCVIRNEQE---S---AQASGELKLGG-RFDPPVIKESFSDETLNPGPNYYFKCIASGN-PTP-EISWYL-DGKKLV 116 (119)
Q Consensus 49 y~C~~~~~~~---~---~~~~~~~~v~~-~~~~~~~~~~~~~~~~~~g~~~~l~C~~~~~-p~~-~~~W~~-~~~~~~ 116 (119)
|.|.+.+..+ . ......+.|.. ...+|.+........+..|+.+.|.|.+.+. |.+ .+.|++ +|..+.
T Consensus 94 Y~C~~~~~~~~~~~~~~~~~~~~L~V~~~~~~~P~i~~~~~~~~~~~g~~v~L~C~~~g~~P~p~~v~W~~~~g~~l~ 171 (223)
T 1dee_B 94 YYCAKVKFYDPTAPNDYWGQGTLVTVSSGSASAPTLFPLVSCENSNPSSTVAVGCLAQDFLPDSITFSWKYKNNSDIS 171 (223)
T ss_dssp EEEEEESSSSTTCCEEEECCCEEEEECSSCCBCCEEEEEECTTCCCSSSEEEEEEEEEEEBSSCCEEEEEETTSCBCS
T ss_pred EEEEEeccccCcccceeecCcEEEEEccCCCCCCEEEEecCCcccCCCCcEEEEEEEEEEeCCCeEEEeEccCCCccc
Confidence 9999998642 1 11223444432 1124555433223345789999999999887 766 899999 887653
No 163
>1pz5_B Heavy chain of FAB (SYA/J6); antibody-antigen structure, peptide-carbohydrate mimicry, VA design, immune system; 1.80A {Mus musculus} SCOP: b.1.1.1 b.1.1.2 PDB: 1m7d_B* 1m71_B* 1m7i_B* 1r24_B 1uz6_F 1uz8_B* 1clz_H*
Probab=99.72 E-value=6e-17 Score=91.43 Aligned_cols=113 Identities=16% Similarity=0.358 Sum_probs=78.5
Q ss_pred CCccEEEEEEeccCC--CCeeEEeeCC--cc---C------------------CC---------CCCCeEEEecCCCCCC
Q psy12725 1 MLALKFFTCKYEGNP--VKTISWMKDG--KP---V------------------PD---------HNEPVFRIDSVRKEDK 46 (119)
Q Consensus 1 ~g~~~~l~c~~~~~~--~~~v~w~~~~--~~---~------------------~~---------~~~~~l~~~~~~~~d~ 46 (119)
.|+.|+|.|.+.+.+ .+.+.|+|++ .. + .. .....|.|.+++.+|+
T Consensus 14 ~G~~v~L~C~~~~~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~~L~I~~v~~~D~ 93 (220)
T 1pz5_B 14 PGGSMKLSCVASGFTFSNYWMEWVRQSPEKGLEWVAEIRLKSNNYATHYAESVKGRFTISRDDSKSSVYLQMNNLRAEDT 93 (220)
T ss_dssp TTCCEEEEEEEESSCGGGSEEEEEEEETTTEEEEEEEECCGGGTTCEEECGGGTTTEEEEEEGGGTEEEEEECSCCGGGC
T ss_pred CCCeEEEEEEEcCCccCCccEEEEEeCCCCCcEEEEEEEcCCCccccccCcccCCcEEEEEeCCCCeEEEEEccCCHHHC
Confidence 489999999998765 6789999853 11 0 00 0112799999999999
Q ss_pred eEEEEEEEcCCCCc-e--eEeeEEEeee-cCCCeeeecCCccccCCCCcEEEEeEEccC-CCC-eEEEEECCE
Q psy12725 47 GMYQCVIRNEQESA-Q--ASGELKLGGR-FDPPVIKESFSDETLNPGPNYYFKCIASGN-PTP-EISWYLDGK 113 (119)
Q Consensus 47 g~y~C~~~~~~~~~-~--~~~~~~v~~~-~~~~~~~~~~~~~~~~~g~~~~l~C~~~~~-p~~-~~~W~~~~~ 113 (119)
|.|.|.+.+..+.. . ....+.+... ..+|.+...+....+.+|+.+.|.|.+.+. |.| .+.|++++.
T Consensus 94 G~Y~C~~~~~~~~~~~~~~~~~l~V~~~~~~~P~i~~~~~~~~~~~g~~v~L~C~~~g~~P~p~~v~W~~~~~ 166 (220)
T 1pz5_B 94 GIYYCTRGGAVGAMDYWGQGTSVTVSSATTTAPSVYPLVPGCSDTSGSSVTLGCLVKGYFPEPVTVKWNYGAL 166 (220)
T ss_dssp EEEEEEEECTTSSEEEECCCEEEEECSSCCBCCEEEEECCCSCCSCSSSEEEEEEEEEEBSSCCEEEEGGGTC
T ss_pred EEEEEEEecCCcccceECCCEEEEEccCCCCCCeEEEcccccccCCCCcEEEEEEEEEEeCCCeEEEEecCCc
Confidence 99999999864321 1 2334444321 134555544433456789999999999887 888 999998875
No 164
>3eow_R Poliovirus receptor; immunoglobulin super family, alternative splicing, cell adhesion, cell membrane, glycoprotein, HOST-virus interaction; 3.50A {Homo sapiens} PDB: 3uro_R 3epc_R* 3epd_R* 3epf_R*
Probab=99.72 E-value=6.4e-17 Score=91.35 Aligned_cols=108 Identities=19% Similarity=0.370 Sum_probs=75.7
Q ss_pred CCccEEEEEEecc-CCCC----eeEEeeCCccCC---------------------------CCCCCeEEEecCCCCCCeE
Q psy12725 1 MLALKFFTCKYEG-NPVK----TISWMKDGKPVP---------------------------DHNEPVFRIDSVRKEDKGM 48 (119)
Q Consensus 1 ~g~~~~l~c~~~~-~~~~----~v~w~~~~~~~~---------------------------~~~~~~l~~~~~~~~d~g~ 48 (119)
.|+.+.|.|.+.+ .+.+ .+.|++++.... .....+|.|.+++.+|+|.
T Consensus 13 ~G~~v~L~C~~~~~~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~sL~I~~v~~~D~G~ 92 (221)
T 3eow_R 13 LGDSVTLPCYLQVPNMEVTHVSQLTWARHGESGSMAVFHQTQGPSYSESKRLEFVAARLGAELRDASLRMFGLRVEDEGS 92 (221)
T ss_dssp CSSCCEEECCCCCCSSSCCCEEEEEECBSSSCSSCCCEEESSSEEECSCSSCEEESSCSSCCCCCCEEECCCSSCCCCSC
T ss_pred eCCCEEEEeeeccCCCCCccceEEEEEeCCCCceEEEEECCCCCCcCCCCcEEEecccCCCCCCCceEEEccCChHHCeE
Confidence 4899999999954 3433 399999864211 0135689999999999999
Q ss_pred EEEEEEcCC-CCceeEeeEEEeeecCCCeeeecCCccccCCCCcE-EEEeEEc-cCCCCeEEEEECC
Q psy12725 49 YQCVIRNEQ-ESAQASGELKLGGRFDPPVIKESFSDETLNPGPNY-YFKCIAS-GNPTPEISWYLDG 112 (119)
Q Consensus 49 y~C~~~~~~-~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~g~~~-~l~C~~~-~~p~~~~~W~~~~ 112 (119)
|.|.+.+.. +.......+.|. .+|.+...+.... ..|+.+ .|.|.+. +.|.|.+.|++++
T Consensus 93 Y~C~~~~~~~~~~~~~~~L~V~---~~P~~~~~~~~~~-~~g~~~~~l~C~~~~g~P~p~v~W~k~~ 155 (221)
T 3eow_R 93 YTCLFVTFPQGSRSVDIWLRVL---AKPQNTAEVQKVQ-LTGEPVPMARCVSTGGRPPAQITWHSDL 155 (221)
T ss_dssp BEEEEEESSSCSCEEECCCCCC---CCCEEEEEEECCC-CCSSSCCEEEEEEESCSSCCCEEEECSS
T ss_pred EEEEEEeCCCCceEEEEEEEEE---ECCCceeecCCcc-cCCceEEEEEEECCCccCCCeeEEEeCC
Confidence 999999865 444444444443 3666654433323 677888 5999976 7888899999863
No 165
>3mj6_A Junctional adhesion molecule-like; immunoglobulin tandem domain, cell adhesion, cell junction, glycoprotein, immunoglobulin domain, membrane; HET: NAG FUC; 2.19A {Mus musculus} PDB: 3mj7_A* 3mj9_A*
Probab=99.72 E-value=5.2e-17 Score=93.92 Aligned_cols=105 Identities=19% Similarity=0.370 Sum_probs=76.2
Q ss_pred CCccEEEEEEec---cCCCCeeEEeeCCccCCC-----------------------------CCCCeEEEecCCCCCCeE
Q psy12725 1 MLALKFFTCKYE---GNPVKTISWMKDGKPVPD-----------------------------HNEPVFRIDSVRKEDKGM 48 (119)
Q Consensus 1 ~g~~~~l~c~~~---~~~~~~v~w~~~~~~~~~-----------------------------~~~~~l~~~~~~~~d~g~ 48 (119)
.|+.+.|.|.+. +.+.+.+.|++++..... .....|.|.+++.+|+|.
T Consensus 19 ~G~~v~L~C~~~~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~I~~v~~~D~G~ 98 (268)
T 3mj6_A 19 VGESVLMGCVVQRTEEKHVDRVDWLFSKDKDDASEYVLFYYSNLSVPTGRFQNRSHLVGDTFHNDGSLLLQDVQKADEGI 98 (268)
T ss_dssp TTCCEEECCBCCCSSCCCEEEEEEEEESSSTTCCEEEEEEETTEEEECGGGTTTEEECSCTTTTBCCEEECSCCGGGCEE
T ss_pred cCCcEEEEEEeecCCCCceEEEEEEEeCCCCCceEEEEEEcCCCcccCccccCceEEeecCCCCEEEEEECCCCHhHCEE
Confidence 489999999987 556778999985432110 122679999999999999
Q ss_pred EEEEEEcCCCCceeEeeEEEeeecCCCeeeecCCccccCCCCcEEEEeEE---ccCCCCeEEEEEC
Q psy12725 49 YQCVIRNEQESAQASGELKLGGRFDPPVIKESFSDETLNPGPNYYFKCIA---SGNPTPEISWYLD 111 (119)
Q Consensus 49 y~C~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~g~~~~l~C~~---~~~p~~~~~W~~~ 111 (119)
|.|.+.+..........+.+.+.... +....+..|+.+.|.|.+ .+.|.+.+.|+++
T Consensus 99 Y~C~~~~~~~~~~~~~~~~l~V~~~~------p~~~~v~~G~~v~L~C~~~~~~~~p~~~v~W~~~ 158 (268)
T 3mj6_A 99 YTCEIRLKNESMVMKKPVELWVLPEE------PRDLRVRVGDTTQMRCSIQSTEEKRVTKVNWMFS 158 (268)
T ss_dssp EEEEEEETTCCCEEEEEEEEEEECCC------CSEEEEETTCCEEECCBCEESSSSCCCEEEEEEE
T ss_pred EEEEEEecCCcceEEEEEEEEEeccC------CCccccccCCcEEEEEEecCCCCCCccceEEEec
Confidence 99999987554444444555442122 223457789999999998 5668889999983
No 166
>3esu_F Antibody 14B7* light chain and antibody 14B7* heavy chain linked with A synthetic...; single-chain FV, monoclonal antibody, immunoglobulin; 1.30A {Mus musculus} PDB: 3et9_F 3esv_F 3etb_F 1h8n_A 1h8s_A* 1h8o_A*
Probab=99.71 E-value=2.8e-16 Score=90.17 Aligned_cols=111 Identities=17% Similarity=0.299 Sum_probs=74.5
Q ss_pred CCccEEEEEEeccCCCCeeEEeeCCcc--C-----------C-CC---------CCCeEEEecCCCCCCeEEEEEEEcCC
Q psy12725 1 MLALKFFTCKYEGNPVKTISWMKDGKP--V-----------P-DH---------NEPVFRIDSVRKEDKGMYQCVIRNEQ 57 (119)
Q Consensus 1 ~g~~~~l~c~~~~~~~~~v~w~~~~~~--~-----------~-~~---------~~~~l~~~~~~~~d~g~y~C~~~~~~ 57 (119)
.|+.|+|.|.+.+.+.+.+.|+|.... . . .. ....|.|.+++.+|.|.|.|.+.+..
T Consensus 18 ~G~~v~L~C~~~~~~~~~i~W~k~~~~~~~~~l~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~D~G~Y~C~~~n~~ 97 (250)
T 3esu_F 18 LGDRVTISCRASQDIRNYLNWYQQKPDGTVKLLIYYTSRLQSGVPSRFSGSGSGTDYSLTISNLEQEDIGTYFCQQGNTL 97 (250)
T ss_dssp TTCCEEEEEEESSCCTTCEEEEEECTTSCEEEEEETTTEECTTCCTTEEEEEETTEEEEEESSCCGGGCEEEEEEECSSS
T ss_pred CCCcEEEEEEecccCCceEEEEEECCCCCCEEEEEEeCCCCCCCCCCEEEeCCCCEEEEEEccCChhhCEEEEEEEeeCC
Confidence 489999999999988889999985310 0 0 00 11269999999999999999998764
Q ss_pred CCc-eeEeeEEEeee----------------cCCCeeeecCCccccCCCCcEEEEeEEccCC--CCeEEEEEC
Q psy12725 58 ESA-QASGELKLGGR----------------FDPPVIKESFSDETLNPGPNYYFKCIASGNP--TPEISWYLD 111 (119)
Q Consensus 58 ~~~-~~~~~~~v~~~----------------~~~~~~~~~~~~~~~~~g~~~~l~C~~~~~p--~~~~~W~~~ 111 (119)
+.. .....+.+... ..++.....+....+.+|+.+.|.|.+.+.+ .+.+.|+++
T Consensus 98 ~~~~~~~~~l~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~G~~v~L~C~~~~~~~~~~~v~W~k~ 170 (250)
T 3esu_F 98 PWTFGGGTKLEIRRGGGGSGGGGSGGGGSGGGGSEVQLQQSGPELVKPGASVKISCKDSGYAFSSSWMNWVKQ 170 (250)
T ss_dssp SCEECCCEEEEEC------------------------CEECCCEEECTTCCEEEEEECCSTTGGGSEEEEEEE
T ss_pred CceECCCEEEEEECCCCcccccccccccccCcccceEEecCCceEEcCCceEEEEEEecCCcccCCEEEEEEE
Confidence 321 12233444321 0112222334445678999999999998876 678999986
No 167
>3umt_A SCFV heavy chain and light chain; stability engineering, anthrax, anti-BCLA antibody, immunoglobulin fold (VH and VL domains), antibody, immune S; HET: NHE; 1.80A {Mus musculus} PDB: 1xiw_D
Probab=99.71 E-value=1.6e-16 Score=91.64 Aligned_cols=111 Identities=18% Similarity=0.279 Sum_probs=77.2
Q ss_pred CCccEEEEEEeccCC--CCeeEEeeCC--ccCC-------------------C---------CCCCeEEEecCCCCCCeE
Q psy12725 1 MLALKFFTCKYEGNP--VKTISWMKDG--KPVP-------------------D---------HNEPVFRIDSVRKEDKGM 48 (119)
Q Consensus 1 ~g~~~~l~c~~~~~~--~~~v~w~~~~--~~~~-------------------~---------~~~~~l~~~~~~~~d~g~ 48 (119)
.|+.|+|.|.+.+.+ .+.+.|||.. ..+. . .....|.|.+++.+|+|.
T Consensus 16 ~G~~v~L~C~~~~~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~I~~v~~~DsG~ 95 (256)
T 3umt_A 16 PGASVKISCKTSGYTFTEYTMHWVKQSHGKSLEWIGGINPNNGGTSYNQKFKGKAILTVDKSSSTAYLELRSLTSEDSAV 95 (256)
T ss_dssp TTCCEEEEEEEESSCGGGSCEEEEEECTTSCEEEEEEECTTTCCEEECGGGTTTEEEEEEGGGTEEEEEECSCCGGGCEE
T ss_pred CCCCEEEEEEEecccccccEEEEEEECCCCCcEEEEEEeccCCcccccccccceEEEEEecCCCEEEEEECCCCcccCEE
Confidence 489999999998765 6789999732 1100 0 012349999999999999
Q ss_pred EEEEEEcCC----CCceeEeeEEEeee------------c-CCCeeeecCCccccCCCCcEEEEeEEccCCCCeEEEEEC
Q psy12725 49 YQCVIRNEQ----ESAQASGELKLGGR------------F-DPPVIKESFSDETLNPGPNYYFKCIASGNPTPEISWYLD 111 (119)
Q Consensus 49 y~C~~~~~~----~~~~~~~~~~v~~~------------~-~~~~~~~~~~~~~~~~g~~~~l~C~~~~~p~~~~~W~~~ 111 (119)
|.|.+.+.. ........+.|... . .++.+...+....+.+|+.++|.|.+.+.+.+.+.|+++
T Consensus 96 Y~C~~~~~~~~~~~~~~~~~~L~V~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~v~~G~~v~L~C~~~~~~~~~v~W~k~ 175 (256)
T 3umt_A 96 YYCARDDRYPAWFAYWGQGTTVTVSSGGGGSGGGGSGGGGSTDIQLTQSPSSLSASLGERVSITCRASQDIGSNLNWLQQ 175 (256)
T ss_dssp EEEEECCSTTCCSCEECCCEEEEECC---------------CCCCEEEECSEEEECTTCCEEEEEEESSCCTTCEEEEEE
T ss_pred EEEEEccCCCccccEECCCEEEEEcCCCccccCcccCCCCccccEEEcCCCeEEEECCCCEEEEEEEecCCCcEEEEEEE
Confidence 999998762 11222334444321 0 145555555556788999999999999988889999983
No 168
>3auv_A SC-DSFV derived from the G6-FAB; SC-DSFV (disulfide-stabilized SCFV), SCFV, monovalent antibo antibody engineering, immune system; 2.40A {Homo sapiens} PDB: 2kh2_B 3iy0_L
Probab=99.71 E-value=1.4e-16 Score=92.78 Aligned_cols=111 Identities=16% Similarity=0.242 Sum_probs=74.7
Q ss_pred CCccEEEEEEeccCCCCeeEEeeCCcc-----CC---------CC---------CCCeEEEecCCCCCCeEEEEEEEcCC
Q psy12725 1 MLALKFFTCKYEGNPVKTISWMKDGKP-----VP---------DH---------NEPVFRIDSVRKEDKGMYQCVIRNEQ 57 (119)
Q Consensus 1 ~g~~~~l~c~~~~~~~~~v~w~~~~~~-----~~---------~~---------~~~~l~~~~~~~~d~g~y~C~~~~~~ 57 (119)
.|+.|+|.|.+.+.+.+.+.|||++.. +. .. ....|.|.+++.+|+|.|.|.+.+..
T Consensus 26 ~G~~v~L~C~~~~~p~~~i~W~r~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~DsG~Y~C~~~n~~ 105 (276)
T 3auv_A 26 VGDRVTITCRASQDVSTAVAWYQQKPGKAPKLLIYSASFLYSGVPSRFSGSGSGTDFTLTISSLQPEDFATYYCQQHYTT 105 (276)
T ss_dssp TTCCEEEEEEESSCCTTCEEEEEECTTSCCEEEEETTTEECTTCCTTEEEEEETTEEEEEESSCCGGGCEEEEEEECSSS
T ss_pred CCCCEEEEeEcCCCCCCcEEEEEECCCCCCEEEEEEcCccCCCCCCCEEEeccCCeEEEEEccCChhhCEEEEEEEecCC
Confidence 489999999999888889999985421 10 00 12379999999999999999999864
Q ss_pred CC-ceeEeeEEEeeec----------CCCe-eeecCCccccCCCCcEEEEeEEccCC--CCeEEEEEC
Q psy12725 58 ES-AQASGELKLGGRF----------DPPV-IKESFSDETLNPGPNYYFKCIASGNP--TPEISWYLD 111 (119)
Q Consensus 58 ~~-~~~~~~~~v~~~~----------~~~~-~~~~~~~~~~~~g~~~~l~C~~~~~p--~~~~~W~~~ 111 (119)
+. ......+.|.... .+|. ....+....+.+|+.+.|.|.+.+.+ .+.+.|+++
T Consensus 106 ~~~~~~~~~l~V~~~~~~~~~~~~~~~~p~~~~~~p~~~~v~~G~~v~L~C~~~g~~~~~~~v~W~k~ 173 (276)
T 3auv_A 106 PPTFGCGTKVEIKGGGGGSIEGRSGGGGSEVQLVESGGGLVQPGGSLRLSCAASGFTISDYWIHWVRQ 173 (276)
T ss_dssp SCCCCCCEEEEC-----------------CCEEEEECCEEECTTCCEEEEEEEESSCGGGSEEEEEEE
T ss_pred cccccCCEEEEEecCCCccccccccccCcceEEECCCceEecCCCeEEEEEEecCccCCCCEEEEEEc
Confidence 32 2222334433210 0122 22233455678999999999998876 478999985
No 169
>3to4_D NKT vbeta2 (mouse variable domain, human constant; mouse CD1D, mouse NKT, immune system; HET: AGH NAG; 3.10A {Homo sapiens}
Probab=99.71 E-value=1.1e-16 Score=92.14 Aligned_cols=116 Identities=16% Similarity=0.309 Sum_probs=76.3
Q ss_pred CCccEEEEEEeccCCCCeeEEeeCC--cc----------------------CC---CCCCCeEEEecCCCCCCeEEEEEE
Q psy12725 1 MLALKFFTCKYEGNPVKTISWMKDG--KP----------------------VP---DHNEPVFRIDSVRKEDKGMYQCVI 53 (119)
Q Consensus 1 ~g~~~~l~c~~~~~~~~~v~w~~~~--~~----------------------~~---~~~~~~l~~~~~~~~d~g~y~C~~ 53 (119)
.|+.|+|.|.+.+.+.+.+.|||.. .. +. ..... |.|.+++.+|+|.|+|.+
T Consensus 15 ~G~~v~L~C~~~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~-L~I~~v~~~DsG~Y~C~~ 93 (253)
T 3to4_D 15 RGQAVNLRCILKNSQYPWMSWYQQDLQKQLQWLFTLRSPGDKEVKSLPGADYLATRVTDTE-LRLQVANMSQGRTLYCTS 93 (253)
T ss_dssp SSCCEEEEEECSCTTCCCEEEEEEETTCCEEEEEEECSTTCEEEEEETTEEEEEECCSSSC-CEEEEESCSSCEEEEEEE
T ss_pred CCCcEEEEEEeCCCCcceEEEEEECCCCCcEEEEEECCCcceecCCccCCcEEEEeCCCCe-EEEccCChhhCeEEEEEE
Confidence 4899999999888788899999821 10 00 00111 899999999999999999
Q ss_pred EcCCC----C--ceeEeeEEEeee---cCCCeeeecC-CccccCCCCcEEEEeEEcc-CCCC-eEEEEECCEEccc
Q psy12725 54 RNEQE----S--AQASGELKLGGR---FDPPVIKESF-SDETLNPGPNYYFKCIASG-NPTP-EISWYLDGKKLVN 117 (119)
Q Consensus 54 ~~~~~----~--~~~~~~~~v~~~---~~~~~~~~~~-~~~~~~~g~~~~l~C~~~~-~p~~-~~~W~~~~~~~~~ 117 (119)
.+..+ . ......+.+... ..+|.+.... ....+..|+.+.|.|.+.+ .|.+ .+.|+++|..+..
T Consensus 94 ~~~~~~~~~~~~~~~~t~l~V~~~~~~~~~P~v~~~~~~~~~~~~g~~~~L~C~~~g~~P~~i~v~W~k~g~~l~~ 169 (253)
T 3to4_D 94 SADHWTNTGQLYFGEGSKLTVLEDLKNVFPPEVAVFEPSEAEISHTQKATLVCLATGFYPDHVELSWWVNGKEVHS 169 (253)
T ss_dssp ECSCCSTTCCEEECCCEEEEEESCSTTCBCCEEEEEECCHHHHHHHSEEEEEEEEEEEBSSCEEEEEEETTEEECT
T ss_pred ecCCCCcccceEECCCEEEEEecCCCCCCCCeEEEeCCChhhcccCCceEEEEEEceEECCcEEEEEEECCEECCC
Confidence 86532 1 111223444321 1345544432 2223345689999999988 4666 7999999998754
No 170
>1mju_H Immunoglobulin MS6-12; catalytic antibody, ester hydrolysis, esterolytic, FAB, immune system; 1.22A {Mus musculus} SCOP: b.1.1.1 b.1.1.2 PDB: 1mjj_B 1mie_H 1mj7_H* 1mj8_H 1mh5_B* 4aeh_H 2y5t_A 2vwe_E 2op4_H 2ntf_H 3loh_C 1e4x_H 2vl5_A 1e4x_I 1e4w_H 3opz_H 3oz9_H 1plg_H 1hi6_B 1cfn_B ...
Probab=99.71 E-value=7.9e-17 Score=91.52 Aligned_cols=115 Identities=16% Similarity=0.287 Sum_probs=73.4
Q ss_pred CCccEEEEEEeccCC--CCeeEEeeCC--ccC-------------------CC---------CCCCeEEEecCCCCCCeE
Q psy12725 1 MLALKFFTCKYEGNP--VKTISWMKDG--KPV-------------------PD---------HNEPVFRIDSVRKEDKGM 48 (119)
Q Consensus 1 ~g~~~~l~c~~~~~~--~~~v~w~~~~--~~~-------------------~~---------~~~~~l~~~~~~~~d~g~ 48 (119)
+|+.|+|.|.+.+.+ .+.+.|||.. ..+ .. .....|.|.+++.+|+|.
T Consensus 14 ~G~~v~L~C~~~~~~~~~~~v~W~r~~~g~~~~~l~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~sL~I~~v~~~D~G~ 93 (227)
T 1mju_H 14 PGASVKLSCKASGYTFTNYWINWVKQRPGQGLEWIGNIYPGSSYTHYNEKFKNKATLTVDTSSSTAYMQLSSLTSDDSAV 93 (227)
T ss_dssp TTCCEEEEEEEESSCGGGSCEEEEEECTTSCEEEEEEEETTTTEEEECGGGTTTEEEEEETTTTEEEEEECSCCGGGCEE
T ss_pred CCCCEEEEEEecCCccccceEEEEEeCCCCCcEEEEEEeccCCceeeCCccCCcEEEEEeCCCCeEEEEECCCCcccCEE
Confidence 489999999998765 6789999853 211 00 012479999999999999
Q ss_pred EEEEEEcCCCC-ceeEeeEEEee-ecCCCeeeecCCccccCCCCcEEEEeEEccC-CCC-eEEEEECCEEc
Q psy12725 49 YQCVIRNEQES-AQASGELKLGG-RFDPPVIKESFSDETLNPGPNYYFKCIASGN-PTP-EISWYLDGKKL 115 (119)
Q Consensus 49 y~C~~~~~~~~-~~~~~~~~v~~-~~~~~~~~~~~~~~~~~~g~~~~l~C~~~~~-p~~-~~~W~~~~~~~ 115 (119)
|.|.+.+.... ......+.|.. ...+|.+........+..|+.+.|.|.+.+. |.+ .+.|++++..+
T Consensus 94 Y~C~~~~~~~~~~~~~~~L~V~~~~~~~P~v~~~~~~~~~~~g~~v~L~C~~~g~~P~p~~v~W~~~g~~~ 164 (227)
T 1mju_H 94 YYCANKLGWFPYWGQGTLVTVSAAKTTAPSVYPLAPVCGDTSGSSVTLGCLVKGYFPEPVTLTWNSGSLSS 164 (227)
T ss_dssp EEEEEEETTEEEECCCEEEEECSSCCBCCEEEEECCCC------CEEEEEEEEEEBSSCCEEEEGGGTBCT
T ss_pred EEEEECCCCceEEcCcEEEEEcCCCCCCCEEEEecCCccccCCCcEEEEEEeecEeCCCeEEEEecCCCcC
Confidence 99999875311 11223444432 1124554443323345689999999999875 666 89999988754
No 171
>1qok_A MFE-23 recombinant antibody fragment; immunoglobulin, single-chain FV, anti-carcinoembryonic antigen; 2.4A {Mus musculus} SCOP: b.1.1.1 b.1.1.1
Probab=99.71 E-value=1.7e-16 Score=92.74 Aligned_cols=113 Identities=17% Similarity=0.318 Sum_probs=77.3
Q ss_pred CCccEEEEEEeccCC--CCeeEEeeCCc--cC-------------------CC---------CCCCeEEEecCCCCCCeE
Q psy12725 1 MLALKFFTCKYEGNP--VKTISWMKDGK--PV-------------------PD---------HNEPVFRIDSVRKEDKGM 48 (119)
Q Consensus 1 ~g~~~~l~c~~~~~~--~~~v~w~~~~~--~~-------------------~~---------~~~~~l~~~~~~~~d~g~ 48 (119)
.|+.|+|.|.+.+.+ .+.+.|||++. .+ .. .....|.|.+++.+|+|.
T Consensus 40 ~G~~v~L~C~~~g~~~~~~~v~W~r~~~~~~~~~l~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~sL~I~~v~~~DsG~ 119 (282)
T 1qok_A 40 SGTSVKLSCTASGFNIKDSYMHWLRQGPEQGLEWIGWIDPENGDTEYAPKFQGKATFTTDTSSNTAYLQLSSLTSEDTAV 119 (282)
T ss_dssp TTCCEEEEEEEESSCGGGSCEEEEEECTTCCEEEEEEEETTTTEEEECGGGBTTEEEEEETTTTEEEEEECSCCGGGCEE
T ss_pred CCCeEEEEEeccCCCCCCceEEEEEeCCCCCcEEEEEEecCCCccccCchhcCcEEEEEecCCCeEEEEECcCChhhCEE
Confidence 489999999998764 57899998531 10 00 012479999999999999
Q ss_pred EEEEEEcCCC---Cce--eEeeEEEeeec------------CCCeeeecCCccccCCCCcEEEEeEEccCCCCeEEEEE-
Q psy12725 49 YQCVIRNEQE---SAQ--ASGELKLGGRF------------DPPVIKESFSDETLNPGPNYYFKCIASGNPTPEISWYL- 110 (119)
Q Consensus 49 y~C~~~~~~~---~~~--~~~~~~v~~~~------------~~~~~~~~~~~~~~~~g~~~~l~C~~~~~p~~~~~W~~- 110 (119)
|.|.+.+..+ ... ....+.|.... .++.+...+....+.+|+.+.|.|.+.+.+ +.+.|+|
T Consensus 120 Y~C~~~n~~g~~~~~~~~~~~~L~V~~~~~~~~~~~~~~~~~~~~~~~~p~~~~v~~G~~v~L~C~~~~~~-~~v~W~k~ 198 (282)
T 1qok_A 120 YYCNEGTPTGPYYFDYWGQGTTVTVSSGGGGSGGGGSGGGGSENVLTQSPAIMSASPGEKVTITCSASSSV-SYMHWFQQ 198 (282)
T ss_dssp EEEEEECSSSSCCCEEECCCEEEEEEC---------------CCCEEEECSEEEECTTCCEEEEEEESSCC-SCCEEEEE
T ss_pred EEEEeccCCCccceeeeCCCEEEEEecCCcccCCccCCCCccceEEecCCCEEEEcCCCcEEEEEEecCCC-ceEEEEEE
Confidence 9999998754 111 22344443211 123344444455688999999999999888 8999998
Q ss_pred -CCEE
Q psy12725 111 -DGKK 114 (119)
Q Consensus 111 -~~~~ 114 (119)
++..
T Consensus 199 ~~g~~ 203 (282)
T 1qok_A 199 KPGTS 203 (282)
T ss_dssp CTTSC
T ss_pred CCCCC
Confidence 5543
No 172
>3nl4_H Antigen binding fragment,immunoglobulin IGG - HEA; FAB, rabbit, conformation-specific, amyloid, immune system; 1.54A {Oryctolagus cuniculus} PDB: 4hbc_H
Probab=99.71 E-value=1.4e-16 Score=89.71 Aligned_cols=114 Identities=15% Similarity=0.233 Sum_probs=74.3
Q ss_pred CCccEEEEEEeccC--CCCeeEEeeCC--ccCC-------------------------CCCCCeEEEecCCCCCCeEEEE
Q psy12725 1 MLALKFFTCKYEGN--PVKTISWMKDG--KPVP-------------------------DHNEPVFRIDSVRKEDKGMYQC 51 (119)
Q Consensus 1 ~g~~~~l~c~~~~~--~~~~v~w~~~~--~~~~-------------------------~~~~~~l~~~~~~~~d~g~y~C 51 (119)
.|+.|+|.|.+.+. +.+.+.|||.. .... ......|.|.+++.+|+|.|.|
T Consensus 13 ~G~~v~L~C~~~~~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~D~G~Y~C 92 (215)
T 3nl4_H 13 PGTPLTLACTVSGFSLNTYSMFWVRQAPGKGLQWIGIISNFGVIYYATWAKGRFTISKTSTTVDLKITSPTTEDTATYFC 92 (215)
T ss_dssp TTCCEEEEEEEESSCTTTCCEEEEEECTTSCEEEEEEECTTCCEEECGGGTTTEEEEECSSEEEEEESSCCGGGCEEEEE
T ss_pred CCCcEEEEEEecCcccCCCeEEEEEECCCCCeEEEEEEecCCccccCCcccCCEEEEeeCCEEEEEECCCCcccCEEEEE
Confidence 48999999999763 36789999732 1100 0112359999999999999999
Q ss_pred EEEcCCCC----ceeEeeEEEee-ecCCCeeeecCCccccCCCCcEEEEeEEccCCCC--eEEEEECCEE
Q psy12725 52 VIRNEQES----AQASGELKLGG-RFDPPVIKESFSDETLNPGPNYYFKCIASGNPTP--EISWYLDGKK 114 (119)
Q Consensus 52 ~~~~~~~~----~~~~~~~~v~~-~~~~~~~~~~~~~~~~~~g~~~~l~C~~~~~p~~--~~~W~~~~~~ 114 (119)
.+.+..+. ......+.+.. ...+|.+...+....+..|+.+.|.|.+.+.+++ .+.|++++..
T Consensus 93 ~~~~~~~~~~~~~~~~~~l~V~~~~~~~P~i~~~~~~~~~~~g~~v~l~C~~~~~~p~~~~v~W~~~g~~ 162 (215)
T 3nl4_H 93 VRKYGSEWGGDLWGPGTLVTVSSGQPKAPSVFPLAPCCGDTPSSTVTLGCLVKGYLPEPVTVTWNSGTLT 162 (215)
T ss_dssp EEECSSSSCEEEECCCEEEEECSSCCBCCEEEEECCCTTCCC--CEEEEEEEEEEBSSCCEEEEGGGTBC
T ss_pred EEecCCCccceEEcCCEEEEEeCCCcCCCEEEEecCCccccCCCcEEEEEEEeeeeCCCeEEEEeeCCEE
Confidence 99887432 22233444431 1235555544444456789999999999886443 5789998863
No 173
>2wqr_A IG epsilon chain C region; immune system, immunoglobulin domain, glycoprotein; HET: NAG BMA MAN PG4; 1.90A {Homo sapiens} PDB: 2y7q_B* 1o0v_A* 3h9y_A* 3h9z_A* 3ha0_A* 1fp5_A 1f6a_B 1g84_A
Probab=99.71 E-value=1.2e-16 Score=94.79 Aligned_cols=115 Identities=16% Similarity=0.261 Sum_probs=77.6
Q ss_pred CCccEEEEEEeccC-CCC---eeEEeeCC-ccCCCC--------C-----CCeEEEecCCCCCCeEEEEEEEcCCCCcee
Q psy12725 1 MLALKFFTCKYEGN-PVK---TISWMKDG-KPVPDH--------N-----EPVFRIDSVRKEDKGMYQCVIRNEQESAQA 62 (119)
Q Consensus 1 ~g~~~~l~c~~~~~-~~~---~v~w~~~~-~~~~~~--------~-----~~~l~~~~~~~~d~g~y~C~~~~~~~~~~~ 62 (119)
.|+.+.|.|.+.+. |.+ .|.|++++ ..+... . ...|.|..++..|.|.|+|.+.+......
T Consensus 127 ~G~~v~L~C~~~g~~P~p~~~~i~W~k~~g~~~~~~~~~~~~~~~g~~~~~~~L~I~~~~~~D~G~Y~C~a~n~~~~~~- 205 (323)
T 2wqr_A 127 IRKSPTITCLVVDLAPSKGTVQLTWSRASGKPVNHSTRKEEKQRNGTLTVTSTLPVGTRDWIEGETYQCRVTHPHLPRA- 205 (323)
T ss_dssp TSSCCEEEEEEEEECCCSSCCEEEEEETTCCCCCCCCCEEEECTTSCEEEEEEEECCHHHHHTTCCEEEEEECTTSSSC-
T ss_pred cCCeEEEEEEEeccCCCCCceEEEEEECCCcccccccCCCccCCCCCEEEEEEEEECHHHccCCCCEEEEEECCCCCCC-
Confidence 48899999999875 455 89999964 443221 1 12588888889999999999998753222
Q ss_pred EeeEEEee---ecCCCeeeecCCccccCCCCcEEEEeEEccC-CCC-eEEEEECCEEccc
Q psy12725 63 SGELKLGG---RFDPPVIKESFSDETLNPGPNYYFKCIASGN-PTP-EISWYLDGKKLVN 117 (119)
Q Consensus 63 ~~~~~v~~---~~~~~~~~~~~~~~~~~~g~~~~l~C~~~~~-p~~-~~~W~~~~~~~~~ 117 (119)
..+.+.. ...+|.+...+.......|+.+.|.|.+.+. |.+ .+.|+++|..+..
T Consensus 206 -~~~~v~~~~~~~~~P~v~~~~~~~~~~~g~~~~l~C~~~g~~p~~~~v~W~k~g~~l~~ 264 (323)
T 2wqr_A 206 -LMRSTTKTSGPRAAPEVYAFATPEWPGSRDKRTLACLIQNFMPEDISVQWLHNEVQLPD 264 (323)
T ss_dssp -EEEEECCCCSCCBCCEEEEEECCCCTTCTTEEEEEEEEEEEBSSCCEEEEEETTEECCG
T ss_pred -eeeEEEccCCCCCCCEEEEeCCChHHhcCCcEEEEEEeeeeeCCCcEEEEEECCEECCC
Confidence 2233321 1235665543333223349999999999884 443 7999999998753
No 174
>2o26_X MAST/stem cell growth factor receptor; stem cell factor, receptor tyrosine kinase, class III, recep ligand complex, cytokine, 4-helix bundle; HET: NAG FUL MAN NDG; 2.50A {Mus musculus}
Probab=99.71 E-value=6.2e-17 Score=94.60 Aligned_cols=105 Identities=16% Similarity=0.159 Sum_probs=78.9
Q ss_pred CCccEEEEEEeccCCCCeeEEeeCCccC--CCCCCCeEEEecCCCCCCeEEEEEEEcCCCCceeEeeEEEeeecCCCeee
Q psy12725 1 MLALKFFTCKYEGNPVKTISWMKDGKPV--PDHNEPVFRIDSVRKEDKGMYQCVIRNEQESAQASGELKLGGRFDPPVIK 78 (119)
Q Consensus 1 ~g~~~~l~c~~~~~~~~~v~w~~~~~~~--~~~~~~~l~~~~~~~~d~g~y~C~~~~~~~~~~~~~~~~v~~~~~~~~~~ 78 (119)
.|+.+.|.|.+.+ .+.|++++..+ ....+..|.|.+++..|.|.|.|.+.+ +. .....+.+. .+|.+.
T Consensus 26 ~G~~v~l~C~~~~----~i~W~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~~~n--g~-~~~~~l~V~---~~~~~~ 95 (290)
T 2o26_X 26 AGDTLSLTCIDPD----FVRWTFKTYFNEMVENKKNEWIQEKAEATRTGTYTCSNSN--GL-TSSIYVFVR---DPAKLF 95 (290)
T ss_dssp TTSCEEEEEECTT----EEEEEEECSSSCEEEECSSEEEETTCCGGGCEEEEEEESS--SC-EEEEEEEEE---CSSCCB
T ss_pred CCCcEEEEECCCC----cEEEecCCcceeeecCCCceEEEeccCHHhCeEEEEEeeC--Cc-cEEEEEEEe---CCCccc
Confidence 4899999999987 89999998876 222448999999999999999999998 22 334444443 234333
Q ss_pred ecCCccccCCCCcEEEEeEEccCCC-CeEEEE-ECCEEcc
Q psy12725 79 ESFSDETLNPGPNYYFKCIASGNPT-PEISWY-LDGKKLV 116 (119)
Q Consensus 79 ~~~~~~~~~~g~~~~l~C~~~~~p~-~~~~W~-~~~~~~~ 116 (119)
..+....+.+|+.+.|.|.+.+ |. +.+.|+ ++|..+.
T Consensus 96 ~~~~~~~~~~g~~v~l~C~~~~-p~~~~v~W~~~~g~~l~ 134 (290)
T 2o26_X 96 LVGLPLFGKEDSDALVRCPLTD-PQVSQYSLIECDGKSLP 134 (290)
T ss_dssp CCCCCEEEETTSCEEECCCBSC-CSCEEEEEEETTSCCCC
T ss_pred ccccceEEecCCeEEEeCcCCC-CCCceEEEEeCCCcCCC
Confidence 4444556778999999999885 77 889995 6777664
No 175
>1c5d_H Monoclonal antibody against the main immunogenic the human muscle acetylcholine receptor...; immunoglobulin, immune system; 2.40A {Rattus norvegicus} SCOP: b.1.1.1 b.1.1.2 PDB: 2arj_H 3b9k_H* 2gk0_H 2gjz_H 1fn4_B 3mj8_H 3mj9_H*
Probab=99.71 E-value=2e-16 Score=89.18 Aligned_cols=114 Identities=16% Similarity=0.340 Sum_probs=77.7
Q ss_pred CCccEEEEEEeccCC--CCeeEEeeCC--ccCC----------------C-----------CCCCeEEEecCCCCCCeEE
Q psy12725 1 MLALKFFTCKYEGNP--VKTISWMKDG--KPVP----------------D-----------HNEPVFRIDSVRKEDKGMY 49 (119)
Q Consensus 1 ~g~~~~l~c~~~~~~--~~~v~w~~~~--~~~~----------------~-----------~~~~~l~~~~~~~~d~g~y 49 (119)
.|+.|+|.|.+.+.+ .+.+.|||.. .... . .....|.|.+++.+|+|.|
T Consensus 14 ~G~~v~L~C~~~~~~~~~~~v~W~r~~~~~~~~~l~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~~L~I~~v~~~D~G~Y 93 (215)
T 1c5d_H 14 PSQTLSLTCTVSGFPLTTNGVSWVRQPPGKGLEWIAAISSGGSPYYNSALKSRLSINRDTSKSQVFLKMNSLQTEDTAIY 93 (215)
T ss_dssp TTCCEEEEEEECSSCTTSCCEEEEEECTTSCCEEEEEECTTCCEECCTTTGGGEEEEEETTTTEEEEEESSCCGGGCEEE
T ss_pred CCCcEEEEEEECCCcCCCCeEEEEEECCCCCcEEEEEEcCCCCcEECCcccCcEEEEeeCCCceEEEEECCCCcccCEEE
Confidence 489999999998754 4789999852 1110 0 0123799999999999999
Q ss_pred EEEEEcCCC---CceeEeeEEEeee-cCCCeeeecCCccccCCCCcEEEEeEEccC-CCC-eEEEEECCEE
Q psy12725 50 QCVIRNEQE---SAQASGELKLGGR-FDPPVIKESFSDETLNPGPNYYFKCIASGN-PTP-EISWYLDGKK 114 (119)
Q Consensus 50 ~C~~~~~~~---~~~~~~~~~v~~~-~~~~~~~~~~~~~~~~~g~~~~l~C~~~~~-p~~-~~~W~~~~~~ 114 (119)
.|.+.+..+ .......+.|... ..+|.+...+....+..|+.+.|.|.+.+. |.+ .+.|++++..
T Consensus 94 ~C~~~~~~~~~~~~~~~~~L~V~~~~~~~P~i~~~~~~~~~~~g~~v~L~C~~~g~~P~p~~v~W~~~g~~ 164 (215)
T 1c5d_H 94 FCTREDGWNYFDYWGPGTMVTVSSAQTTAPSVYPLAPGCGDTTSSTVTLGCLVKGYFPEPVTVTWNSGALS 164 (215)
T ss_dssp EEEECCSSSCSCCBCCCEEEEECSSCCBCCCEEEECCCSSCCCCSSEEEEEEEEEEBSSCCEEEEGGGTTC
T ss_pred EEEEecCCcccceEcCCEEEEecCCCCCCCeEEeccCChhhccCCcEEEEEEEeeeEcCCcEEEEccCCcc
Confidence 999987642 1222344555421 124555443333346789999999999886 777 8999998764
No 176
>2ocw_A Polymeric-immunoglobulin receptor; SC, secretory, antibody, immunity, immune system; NMR {Homo sapiens} PDB: 3chn_S 3cm9_S 3chn_J 3cm9_J
Probab=99.71 E-value=2.8e-16 Score=99.38 Aligned_cols=112 Identities=19% Similarity=0.288 Sum_probs=82.2
Q ss_pred CCccEEEEEEeccCCCCee----EEee--CCc--cCCC---------C---------CCC--eEEEecCCCCCCeEEEEE
Q psy12725 1 MLALKFFTCKYEGNPVKTI----SWMK--DGK--PVPD---------H---------NEP--VFRIDSVRKEDKGMYQCV 52 (119)
Q Consensus 1 ~g~~~~l~c~~~~~~~~~v----~w~~--~~~--~~~~---------~---------~~~--~l~~~~~~~~d~g~y~C~ 52 (119)
.|+.+.|.|.+.+.|.+.+ .|++ ++. .+.. . ... .|.|.+++.+|.|.|.|.
T Consensus 345 ~G~~v~l~C~~~~~p~p~i~~w~~W~~~~~g~~~~l~~~~~~~~~~~~~r~~~~~~~~~g~~~L~I~~v~~~D~G~Y~C~ 424 (585)
T 2ocw_A 345 AGSSVAVLCPYNRKESKSIKYWCLWEGAQNGRCPLLVDSEGWVKAQYEGRLSLLEEPGNGTFTVILNQLTSRDAGFYWCL 424 (585)
T ss_pred eCCcEEEEEecCCCCCccEEEEEEEEccCCCCCceeeeecceeecccCCCEEEeccCCCcEEEEEECCCChhhCEEEEEc
Confidence 3889999999998888876 7999 776 3311 0 112 388999999999999999
Q ss_pred EEcCCCCceeEeeEEEeeecCCCeeeecCCccccCCCCcEEEEeEEc----cCCCCeEEEEECCEEcc
Q psy12725 53 IRNEQESAQASGELKLGGRFDPPVIKESFSDETLNPGPNYYFKCIAS----GNPTPEISWYLDGKKLV 116 (119)
Q Consensus 53 ~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~g~~~~l~C~~~----~~p~~~~~W~~~~~~~~ 116 (119)
+ +..+.......+.+. ..+|.+.. +....+..|+.+.|.|.+. +.|.+.+.|+++|..+.
T Consensus 425 a-n~~g~~~~~~~l~V~--~~~p~~~~-~~~~~v~~G~~v~L~C~~~~~~~~~p~~~v~W~k~g~~~~ 488 (585)
T 2ocw_A 425 T-NGDTLWRTTVEIKII--EGEPNLKV-PGNVTAVLGETLKVPCHFPCKFSSYEKYWCKWNNTGCQAL 488 (585)
T ss_pred c-cCCCccceeEEEEEe--cCcccccc-CCceeEecCCcEEEEEEecCCCCCCccEEEEEeecCceee
Confidence 8 766555445555553 23454443 4555688999999999986 56777899999997663
No 177
>2fbj_H IGA-kappa J539 FAB (heavy chain); immunoglobulin; HET: NAG FUC; 1.95A {Mus musculus} SCOP: b.1.1.1 b.1.1.2 PDB: 1mcp_H 2mcp_H*
Probab=99.70 E-value=1.3e-16 Score=90.16 Aligned_cols=114 Identities=18% Similarity=0.280 Sum_probs=78.1
Q ss_pred CCccEEEEEEeccCC--CCeeEEeeCC--cc---C----------------CC---------CCCCeEEEecCCCCCCeE
Q psy12725 1 MLALKFFTCKYEGNP--VKTISWMKDG--KP---V----------------PD---------HNEPVFRIDSVRKEDKGM 48 (119)
Q Consensus 1 ~g~~~~l~c~~~~~~--~~~v~w~~~~--~~---~----------------~~---------~~~~~l~~~~~~~~d~g~ 48 (119)
.|+.|+|.|.+.+.+ .+.+.|||.. .. + .. .....|.|.+++.+|+|.
T Consensus 14 ~G~~v~L~C~~~~~~~~~~~v~W~r~~~~~~~~~l~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~~L~I~~v~~~DsG~ 93 (220)
T 2fbj_H 14 PGGSLKLSCAASGFDFSKYWMSWVRQAPGKGLEWIGEIHPDSGTINYTPSLKDKFIISRDNAKNSLYLQMSKVRSEDTAL 93 (220)
T ss_dssp TTCCEEEEEEEESSCGGGSCEEEEEECTTSCEEEEEEECTTSSCEEECTTTTTTEEEEECSSSCEEEEEECSCCGGGCEE
T ss_pred CCCcEEEEEEecCccCCCceEEEEEECCCCCeEEEEEEccCCCceecCCccCCcEEEEeeCCCCEEEEEECCCChhhCEE
Confidence 489999999998755 5789999842 11 0 00 012379999999999999
Q ss_pred EEEEEEcCCCC---ceeEeeEEEeee-cCCCeeeecCCccccCCCCcEEEEeEEccC-CC--CeEEEEECCEEc
Q psy12725 49 YQCVIRNEQES---AQASGELKLGGR-FDPPVIKESFSDETLNPGPNYYFKCIASGN-PT--PEISWYLDGKKL 115 (119)
Q Consensus 49 y~C~~~~~~~~---~~~~~~~~v~~~-~~~~~~~~~~~~~~~~~g~~~~l~C~~~~~-p~--~~~~W~~~~~~~ 115 (119)
|.|.+.+.... ......+.|... ..+|.+...+ ...+..|+.+.|.|.+.+. |. +.+.|++++..+
T Consensus 94 Y~C~~~~~~~~~~~~~~~~~L~V~~~~~~~P~v~~~~-~~~~~~g~~v~L~C~~~g~~P~~~~~v~W~~~~~~~ 166 (220)
T 2fbj_H 94 YYCARLHYYGYNAYWGQGTLVTVSAESARNPTIYPLT-LPPALSSDPVIIGCLIHDYFPSGTMNVTWGKSGKDI 166 (220)
T ss_dssp EEEEEEETTTEEEEECCCEEEEECSSCCBCCEEEEEC-CCSSSCCSSEEEEEEEEEEBSCCCEEEEESCCCSSC
T ss_pred EEEEEeccccccceecCCEEEEecCCCCCCCEEEEee-cccccCCCcEEEEEEEEeEECCCcEEEEEecCCEec
Confidence 99999886432 112334444321 1245555444 3346789999999999876 65 689999988654
No 178
>3v2a_R Vascular endothelial growth factor receptor 2; IG-homology domain, vegfr-2, growth factor receptor, VEGF LI hormone-signaling protein complex, angiogenesis; 3.20A {Homo sapiens} PDB: 3v6b_R
Probab=99.70 E-value=8.4e-19 Score=113.57 Aligned_cols=115 Identities=22% Similarity=0.448 Sum_probs=0.0
Q ss_pred CccEEEEEEeccCCCCeeEEeeCCccCCCC-----------------------------CCCeEEEecCCCCCCeEEEEE
Q psy12725 2 LALKFFTCKYEGNPVKTISWMKDGKPVPDH-----------------------------NEPVFRIDSVRKEDKGMYQCV 52 (119)
Q Consensus 2 g~~~~l~c~~~~~~~~~v~w~~~~~~~~~~-----------------------------~~~~l~~~~~~~~d~g~y~C~ 52 (119)
|+.+.|.|.+.+.|.+.+.|++++..+... ....|.|.+++.+|.|.|.|.
T Consensus 564 G~~v~l~C~~~~~p~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~ 643 (772)
T 3v2a_R 564 QESVSLWCTADRSTFENLTWYKLGPQPLPIHVGELPTPVCKNLDTLWKLNATMFSNSTNDILIMELKNASLQDQGDYVCL 643 (772)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred CCceEEEEeccCCCCCCcEEEEcCCcccccccCcccccccccccceeeccceeeecCCCceEEEEECCCCccCCcEEEEE
Confidence 789999999999888999999987543210 112488999999999999999
Q ss_pred EEcCCCCcee--EeeEEEeeecCCCeeeecCCccccCCCCcEEEEeEEccCCCCeEEEEECCEEccc
Q psy12725 53 IRNEQESAQA--SGELKLGGRFDPPVIKESFSDETLNPGPNYYFKCIASGNPTPEISWYLDGKKLVN 117 (119)
Q Consensus 53 ~~~~~~~~~~--~~~~~v~~~~~~~~~~~~~~~~~~~~g~~~~l~C~~~~~p~~~~~W~~~~~~~~~ 117 (119)
+.|..+.... ...+.+.+ ..+|.+...+....+..|+.+.|.|.+.|.|.|.+.|+++|..+..
T Consensus 644 a~n~~~~~~~s~~~~l~v~~-~~~P~~~~~~~~~~v~~g~~~~l~C~~~g~P~p~v~W~k~g~~l~~ 709 (772)
T 3v2a_R 644 AQDRKTKKRHCVVRQLTVLE-RVAPTITGNLENQTTSIGESIEVSCTASGNPPPQIMWFKDNETLVE 709 (772)
T ss_dssp -------------------------------------------------------------------
T ss_pred EEeCCCCeEEEEEEeecccc-cCCCEeecCCCceEEeCCCCEEEEEEeCccCCCeEEEEECCeECcC
Confidence 9995433222 23344432 2466776666666788999999999999999999999999987754
No 179
>3gkz_A Anti-methamphetamine single chain FV; therapeutic antibody, MDMA, IGG, immune system; HET: B40; 1.90A {Mus musculus} PDB: 3gm0_A* 1rvf_L 3ab0_C 2a0l_C 3iy5_A
Probab=99.70 E-value=2.5e-16 Score=90.81 Aligned_cols=110 Identities=20% Similarity=0.347 Sum_probs=75.3
Q ss_pred CCccEEEEEEeccC--CCCeeEEeeCC--cc---C-------------CC-----------CCCCeEEEecCCCCCCeEE
Q psy12725 1 MLALKFFTCKYEGN--PVKTISWMKDG--KP---V-------------PD-----------HNEPVFRIDSVRKEDKGMY 49 (119)
Q Consensus 1 ~g~~~~l~c~~~~~--~~~~v~w~~~~--~~---~-------------~~-----------~~~~~l~~~~~~~~d~g~y 49 (119)
.|+.|+|.|.+.+. +.+.+.|||.. .. + .. .....|.|.+++.+|+|.|
T Consensus 22 ~G~~v~L~C~~~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~I~~v~~~DsG~Y 101 (257)
T 3gkz_A 22 PSQTLSLTCSVTGDSVTSGYWSWIRQFPGNKLDYMGYISYRGSTYYNPSLKSRISITRDTSKNQVYLQLKSVSSEDTATY 101 (257)
T ss_dssp TTCCEEEEEEEEESCCSSCEEEEEEECTTSCEEEEEEEETTCCEEECTTTTTTEEEEEEGGGTEEEEEECSCCGGGCEEE
T ss_pred CCCcEEEEEEEEcccccceEEEEEEECCCCCcEEEEEEecCCcEEecccccccEEEEEecCCceEEEEECCCChhhCEEE
Confidence 48999999999874 46789999832 11 0 00 0122699999999999999
Q ss_pred EEEEEcCCCC----ceeEeeEEEeee-----------cCCCeeeecCCccccCCCCcEEEEeEEccCCCC-eEEEEE
Q psy12725 50 QCVIRNEQES----AQASGELKLGGR-----------FDPPVIKESFSDETLNPGPNYYFKCIASGNPTP-EISWYL 110 (119)
Q Consensus 50 ~C~~~~~~~~----~~~~~~~~v~~~-----------~~~~~~~~~~~~~~~~~g~~~~l~C~~~~~p~~-~~~W~~ 110 (119)
.|.+.+..+. ......+.|... ..++.+...+....+.+|+.++|.|.+.+.+.+ .+.|++
T Consensus 102 ~C~~~n~~~~~~~~~~~~~~l~V~~~~~~~~~~~~~~~~~~~~~~~p~~~~v~~G~~v~L~C~~~~~~~~~~v~W~k 178 (257)
T 3gkz_A 102 YCSYFDSDDYAMEYWGQGTSVTVSGGGGSGGGGSGGGGSQIVLTQSPAIMSASPGEKVTLTCSASSSVSSSHLYWYQ 178 (257)
T ss_dssp EEEEECTTCTTCEEECCCEEEEEC---------CTTCCCCCCEECSCSEEEECTTCCEEEEEEESSCCCGGGEEEEE
T ss_pred EEEEecCCCcceeEEcCCEEEeecCchhhcccccCCCccceEEEcCCceEEEeCCCcEEEEEEEccCccceEEEEEE
Confidence 9999986211 112233444321 013444544555678899999999999888777 899998
No 180
>3u83_A Poliovirus receptor-related protein 1; nectin-1, hinge region plasiticity, cell adhesion; HET: PG6; 2.50A {Homo sapiens} PDB: 3alp_A* 3u82_B 4fmf_A* 3sku_E* 2l7j_A
Probab=99.70 E-value=7.9e-17 Score=95.59 Aligned_cols=111 Identities=18% Similarity=0.286 Sum_probs=80.1
Q ss_pred ccEEEEEE-eccCCCCeeEEeeCCccCC------CCC-----CCeEEEecCCCCCCeEEEEEEEcCCCCceeEeeEEEee
Q psy12725 3 ALKFFTCK-YEGNPVKTISWMKDGKPVP------DHN-----EPVFRIDSVRKEDKGMYQCVIRNEQESAQASGELKLGG 70 (119)
Q Consensus 3 ~~~~l~c~-~~~~~~~~v~w~~~~~~~~------~~~-----~~~l~~~~~~~~d~g~y~C~~~~~~~~~~~~~~~~v~~ 70 (119)
+.+.|.|. ..+.|.+.+.|++++.... ... ...|.+..+...|.|.|+|.+.+..+.......+.+.
T Consensus 151 ~~~~l~C~~~~~~p~~~i~W~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~n~~~~~~~~~~l~V~- 229 (331)
T 3u83_A 151 KVLVATCTSANGKPPSVVSWETRLKGEAEYQEIRNPNGTVTVISRYRLVPSREAHQQSLACIVNYHMDRFKESLTLNVQ- 229 (331)
T ss_dssp CEEEEEEEEEEEBSCCEEEEEESSCCEEEEEEEECTTSCEEEEEEEEECCCGGGTTCEEEEEEEETTEEEEEEEECCEE-
T ss_pred ceEEEEEEecCCcCCceEEEEcCCCCccccceeECCCCcEEEEEEEEEEeccccCCCEEEEEEecCCCcceeeEEEEEe-
Confidence 67999998 7788999999999532110 111 1347777778999999999999986554444444443
Q ss_pred ecCCCeeeecC-CccccCCCCcEEEEeEEccCCCCe-EEEEECCEEcc
Q psy12725 71 RFDPPVIKESF-SDETLNPGPNYYFKCIASGNPTPE-ISWYLDGKKLV 116 (119)
Q Consensus 71 ~~~~~~~~~~~-~~~~~~~g~~~~l~C~~~~~p~~~-~~W~~~~~~~~ 116 (119)
.+|.+...+ ....+..|+.+.|.|.+.+.|.|. +.|++++..+.
T Consensus 230 --~~P~~~~~~~~~~~~~~g~~~~l~C~~~g~p~p~~i~W~~~~~~~~ 275 (331)
T 3u83_A 230 --YEPEVTIEGFDGNWYLQRMDVKLTCKADANPPATEYHWTTLNGSLP 275 (331)
T ss_dssp --EEEEEEEECCCSCCBTTCCCEEEEEEEEEESCCCEEEEEETTBSCC
T ss_pred --cCCeEEEecCCCceEeCCCeEEEEEeCcCCCCCCEEEEEECCCccc
Confidence 244554333 344578899999999999999997 99999987654
No 181
>1cs6_A Axonin-1; neural cell adhesion, cell adhesion; 1.80A {Gallus gallus} SCOP: b.1.1.4 b.1.1.4 b.1.1.4 b.1.1.4 PDB: 2om5_A
Probab=99.70 E-value=3.5e-17 Score=98.82 Aligned_cols=112 Identities=22% Similarity=0.340 Sum_probs=80.8
Q ss_pred CccEEEEEEeccCCCCeeEEeeCCccCCCC-------CCCeEEEecCCC-CCCeEEEEEEEcCCCCcee-EeeEEEeeec
Q psy12725 2 LALKFFTCKYEGNPVKTISWMKDGKPVPDH-------NEPVFRIDSVRK-EDKGMYQCVIRNEQESAQA-SGELKLGGRF 72 (119)
Q Consensus 2 g~~~~l~c~~~~~~~~~v~w~~~~~~~~~~-------~~~~l~~~~~~~-~d~g~y~C~~~~~~~~~~~-~~~~~v~~~~ 72 (119)
|+.+.|.|.+.+.|.+.+.|++++..+... ....|.|.++.. .|+|.|.|.+.+..+.... ...+.+..
T Consensus 22 g~~v~l~C~~~g~p~~~v~W~k~g~~~~~~~~~~~~~~~~~L~i~~~~~~~D~G~Y~C~a~n~~g~~~s~~~~l~v~~-- 99 (382)
T 1cs6_A 22 EEKVTLTCRARANPPATYRWKMNGTELKMGPDSRYRLVAGDLVISNPVKAKDAGSYQCVATNARGTVVSREASLRFGF-- 99 (382)
T ss_dssp CCEEEECCEEEEESCCEEEEEETTEECCCSTTSSEEEETTEEEEESCCHHHHCEEEEEEEEETTEEEECCCEEEEEEE--
T ss_pred CCcEEEEEEecCCCCCEEEEEECCEECCcCCCccEEeeCCeEEEecccccccCEEEEEEEEcCCcEEEecceEEEeec--
Confidence 789999999998888999999999877542 235788888886 9999999999987643221 23333332
Q ss_pred CCCeeeecCCccccCCCCcEEEEeEE-ccCCCCeEEEEECCEEc
Q psy12725 73 DPPVIKESFSDETLNPGPNYYFKCIA-SGNPTPEISWYLDGKKL 115 (119)
Q Consensus 73 ~~~~~~~~~~~~~~~~g~~~~l~C~~-~~~p~~~~~W~~~~~~~ 115 (119)
.++..........+.+|+.+.|.|.+ .+.|.+.+.|++++..+
T Consensus 100 ~~~~~~~~~~~~~v~~G~~v~l~C~~~~~~p~~~i~W~~~~~~~ 143 (382)
T 1cs6_A 100 LQEFSAEERDPVKITEGWGVMFTCSPPPHYPALSYRWLLNEFPN 143 (382)
T ss_dssp ECCCCSSCCCCEEEETTSCEEECCCCCSEESCCEEEEEESSTTC
T ss_pred cccccccCCCceEEecCCcEEEEeCCCCCCCCcEEEEEECCCcc
Confidence 12211222334457799999999985 45677899999987643
No 182
>3bae_H WO2 IGG2A FAB fragment heavy chain; abeta, FAB, WO2, alzheimer'S disease, immunotherapies, APP, immune system; 1.59A {Mus musculus} SCOP: b.1.1.2 PDB: 3bkc_H 3bkj_H 3bkm_H 3mck_H 2r0w_H* 2iqa_H 2iq9_H 1ggi_H 1ggb_H 1ggc_H 3eys_H* 2ipt_H 2ipu_H 3eyu_H* 2r0z_H* 3rkd_H 1r0a_H* 1n5y_H* 1n6q_H* 1t03_H* ...
Probab=99.70 E-value=7.6e-17 Score=91.60 Aligned_cols=114 Identities=18% Similarity=0.345 Sum_probs=75.3
Q ss_pred CCccEEEEEEeccCCC----CeeEEeeCC--ccCC----------------C-----------CCCCeEEEecCCCCCCe
Q psy12725 1 MLALKFFTCKYEGNPV----KTISWMKDG--KPVP----------------D-----------HNEPVFRIDSVRKEDKG 47 (119)
Q Consensus 1 ~g~~~~l~c~~~~~~~----~~v~w~~~~--~~~~----------------~-----------~~~~~l~~~~~~~~d~g 47 (119)
.|+.|+|.|.+.+.+. +.+.|||.. ..+. . .....|.|.+++.+|+|
T Consensus 14 ~G~~v~L~C~~~~~~~~~~~~~v~W~r~~~g~~~~~l~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~~L~I~~v~~~D~G 93 (228)
T 3bae_H 14 PSQTLSLTCSFSGFSIRTSKVGVSWIRQPSGKGLEWLAHIYWDDDKRYNPSLESRLTISKDTSRDMVFMKITSVDTADTA 93 (228)
T ss_dssp TTCCEEEEEEEESSCHHHHCCEEEEEEEETTCCCEEEEEECTTSCEEECTTTGGGEEEEEETTTTEEEEEECSCCGGGCE
T ss_pred CCCeEEEEEEEeCcccCCCceeEEEEEECCCCCeEEEEEEecCCceeeCcccCCcEEEEEcCCCCeEEEEEcCCCcccCE
Confidence 4899999999987664 789999842 2110 0 01257999999999999
Q ss_pred EEEEEEEcCCC------C---ceeEeeEEEee-ecCCCeeeecCCccccCCCCcEEEEeEEccC-CCC-eEEEEECCEE
Q psy12725 48 MYQCVIRNEQE------S---AQASGELKLGG-RFDPPVIKESFSDETLNPGPNYYFKCIASGN-PTP-EISWYLDGKK 114 (119)
Q Consensus 48 ~y~C~~~~~~~------~---~~~~~~~~v~~-~~~~~~~~~~~~~~~~~~g~~~~l~C~~~~~-p~~-~~~W~~~~~~ 114 (119)
.|.|.+.+..+ . ......+.|.. ...+|.+........+..|+.+.|.|.+.+. |.+ .+.|++++..
T Consensus 94 ~Y~C~~~~~~g~~~~~~~~~~~~~~~~L~V~~~~~~~P~i~~~~~~~~~~~g~~~~l~C~~~g~~P~p~~v~W~~~~~~ 172 (228)
T 3bae_H 94 TYYCARRGFYGRKYEVNHFDYWGQGTTLTVSSAKTTAPSVYPLAPVCGDTTGSSVTLGCLVKGYFPEPVTLTWNSGSLS 172 (228)
T ss_dssp EEEEEEEEESTTCTTSEEEEEECCCEEEEECSCCCBCCEEEEECC-----CCSEEEEEEEEEEEBSSCCEEEEGGGTCC
T ss_pred EEEEEEecCCCccccccceeeeCCcEEEEecCCCCCCCEEEEecccccccCCCCEEEEEEEccEeCCCEEEEEeeCCcc
Confidence 99999988643 1 11223444432 1124555443333345789999999999876 777 8999998764
No 183
>2wbj_D OB TCR; transmembrane, immune response, T cell receptor, MHC II, MEM receptor, molecular mimicry, multiple sclerosis, immune SYS autoimmunity; HET: NAG BMA MAN; 3.00A {Homo sapiens}
Probab=99.70 E-value=1.4e-16 Score=92.96 Aligned_cols=117 Identities=19% Similarity=0.353 Sum_probs=78.9
Q ss_pred CCccEEEEEEeccCCCCeeEEeeCC--ccC-------------CC--------------CCCCeEEEecCCCCCCeEEEE
Q psy12725 1 MLALKFFTCKYEGNPVKTISWMKDG--KPV-------------PD--------------HNEPVFRIDSVRKEDKGMYQC 51 (119)
Q Consensus 1 ~g~~~~l~c~~~~~~~~~v~w~~~~--~~~-------------~~--------------~~~~~l~~~~~~~~d~g~y~C 51 (119)
.|+.|+|.|.+.+.+.+.+.|||+. ... .. .....|.|.+++.+|+|.|.|
T Consensus 38 ~G~~v~L~C~~~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~sL~I~~v~~~D~G~Y~C 117 (279)
T 2wbj_D 38 SGTSVKIECRSLDFQATTMFWYRQFPKQSLMLMATSNEGSKATYEQGVEKDKFLINHASLTLSTLTVTSAHPEDSSFYIC 117 (279)
T ss_dssp TTSCEEEEEEESSSCEEEEEEEEECSSSCCEEEEEEESSSCCCCCSSSCSSSEEEEECSSSEEEEEESSCCGGGCEEEEE
T ss_pred CCCeEEEEEEeCCCCCCeEEEEEeCCCCCeEEEEEEecCCcceecCCccCCcEEEEeCCCCEEEEEEccCCccCCEEEEE
Confidence 4899999999987788899999853 110 00 012379999999999999999
Q ss_pred EEEcCCC----C--ceeEeeEEEeee---cCCCeeeecC-CccccCCCCcEEEEeEEccC-CC-CeEEEEECCEEccc
Q psy12725 52 VIRNEQE----S--AQASGELKLGGR---FDPPVIKESF-SDETLNPGPNYYFKCIASGN-PT-PEISWYLDGKKLVN 117 (119)
Q Consensus 52 ~~~~~~~----~--~~~~~~~~v~~~---~~~~~~~~~~-~~~~~~~g~~~~l~C~~~~~-p~-~~~~W~~~~~~~~~ 117 (119)
.+.+..+ . ......+.|... ..+|.+.... ....+..|+.+.|.|.+.+. |. +.+.|+++|..+..
T Consensus 118 ~~~~~~~~~~~~~~~~~~~~l~V~~~~~~~~~P~v~~~~~~~~~~~~g~~v~L~C~~~g~~P~~~~v~W~k~g~~l~~ 195 (279)
T 2wbj_D 118 SARDLTSGANNEQFFGPGTRLTVTEDLKNVFPPEVAVFEPSEAEISHTQKATLVCLATGFYPDHVELSWWVNGKEVHS 195 (279)
T ss_dssp EEEETTCBTSCCEEECCCEEEEEESCGGGCBCCEEEEEECCHHHHHHHSCCEEEEEEEEEBSSCEEEEEEETTEECCT
T ss_pred EEcccccCCccceeeCCCEEEEEecCCCCCCCCEEEEECCCcccccCCCceEEEEEEeeEcCCCcEEEEEECCEECCC
Confidence 9998421 1 112234444321 1255554432 22234578999999999887 43 58999999988753
No 184
>4fmk_A Poliovirus receptor-related protein 2; immunoglobulin-like domain, IG domain, viral entry receptor, adhesion; HET: NAG BMA MAN FUC; 2.56A {Mus musculus} PDB: 4fn0_A* 4fs0_A*
Probab=99.70 E-value=5.9e-16 Score=87.01 Aligned_cols=112 Identities=17% Similarity=0.314 Sum_probs=73.9
Q ss_pred CCccEEEEEEeccCCCC---eeEEeeCCccCC--------------------------------CCCCCeEEEecCCCCC
Q psy12725 1 MLALKFFTCKYEGNPVK---TISWMKDGKPVP--------------------------------DHNEPVFRIDSVRKED 45 (119)
Q Consensus 1 ~g~~~~l~c~~~~~~~~---~v~w~~~~~~~~--------------------------------~~~~~~l~~~~~~~~d 45 (119)
+|+.|+|.|.+.+.+.+ .|.|+|++.... .....+|.|.+++.+|
T Consensus 15 ~G~~v~L~C~~~~~~~~~~~~V~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sL~I~~v~~~D 94 (225)
T 4fmk_A 15 LGGTVELPCHLLPPTTERVSQVTWQRLDGTVVAAFHPSFGVDFPNSQFSKDRLSFVRARPETNADLRDATLAFRGLRVED 94 (225)
T ss_dssp TTSCEEECCEECSSCCCEEEEEEEECTTSCEEEEEETTTEEECCCTTSCTTTEEECCCSCSCCSSCCBCCEEECSCCGGG
T ss_pred cCCCEEEEEEEECCCCCceeEEEEEECCCcceEEEecccceeeccccccccceeeeccccccccccCcEEEEEccCCHHH
Confidence 59999999999876655 489999753320 0123579999999999
Q ss_pred CeEEEEEEEcCCCCceeEeeEEEeeecCCCeeeecCCccccCCCCcEEEEeEE-ccCCCCeEEEEECCEE
Q psy12725 46 KGMYQCVIRNEQESAQASGELKLGGRFDPPVIKESFSDETLNPGPNYYFKCIA-SGNPTPEISWYLDGKK 114 (119)
Q Consensus 46 ~g~y~C~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~g~~~~l~C~~-~~~p~~~~~W~~~~~~ 114 (119)
+|.|.|.+.+..+...... ..+.+. .+|.....+.......++...+.|.+ .+.|++.+.|++++..
T Consensus 95 ~G~Y~C~~~~~~~~~~~~~-~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~P~~~~~w~~~~~~ 162 (225)
T 4fmk_A 95 EGNYTCEFATFPNGTRRGV-TWLRVI-AQPENHAEAQEVTIGPQSVAVARCVSTGGRPPARITWISSLGG 162 (225)
T ss_dssp CEEEEEEEEEETTEEEEEE-EEEEEE-BCCEEEEEECCBCCSSSCEEEEEEEEEEEBSCCEEEEECSSCC
T ss_pred CcceEEEEEeCCCcceeee-eeeeee-cCCceeecccceeecceeeeeeeeeecCCCCCCEEEEEECCcc
Confidence 9999999988654332222 222221 34444444444445566777777765 5567789999987653
No 185
>3tf7_C 42F3 MUT7 SCFV (42F3 alpha chain, linker, 42F3 BE; IG and MHC, antigen recognition, TCR-PMHC, membrane receptor system; 2.75A {Mus musculus}
Probab=99.70 E-value=2.3e-16 Score=90.98 Aligned_cols=109 Identities=17% Similarity=0.284 Sum_probs=76.1
Q ss_pred CCccEEEEEEeccCCCCeeEEeeCC--ccC------------------------CCCCCCeEEEecCCCCCCeEEEEEEE
Q psy12725 1 MLALKFFTCKYEGNPVKTISWMKDG--KPV------------------------PDHNEPVFRIDSVRKEDKGMYQCVIR 54 (119)
Q Consensus 1 ~g~~~~l~c~~~~~~~~~v~w~~~~--~~~------------------------~~~~~~~l~~~~~~~~d~g~y~C~~~ 54 (119)
.|+.|+|.|.+.+.+.+.+.|||.. ... .......|.|.+++.+|+|.|.|.+.
T Consensus 17 ~G~~v~L~C~~~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~sL~I~~v~~~DsG~Y~C~~~ 96 (256)
T 3tf7_C 17 EGASLQLRCKYSYSATPYLFWYVQYPRQGPQMLLKYYSGDPVVQGVNGFEAEFSKSDSSFHLRKASVHRSDSAVYFCAVS 96 (256)
T ss_dssp TTSCEEECCEEECSSCCEEEEEEECTTSCCEEEEEECSSCSEEECSTTCEEEEETTTTEEEEEESSCCGGGCSEEEEEEE
T ss_pred CCCeEEEEEEeCCCCCceEEEEEECCCCCeEEEEEEccCCcccccCCCeEEEEcCCCCEEEEEECCCCcccCEEEEEEEe
Confidence 4899999999988888999999832 110 00123469999999999999999999
Q ss_pred cCCCCc----eeEeeEEEee-----------------ecCCCeeeecCCccccCCCCcEEEEeEEccCCCCeEEEEE
Q psy12725 55 NEQESA----QASGELKLGG-----------------RFDPPVIKESFSDETLNPGPNYYFKCIASGNPTPEISWYL 110 (119)
Q Consensus 55 ~~~~~~----~~~~~~~v~~-----------------~~~~~~~~~~~~~~~~~~g~~~~l~C~~~~~p~~~~~W~~ 110 (119)
+..+.. .....+.|.. ...++.+...+....+.+|+.++|.|.+.+. .+.+.|++
T Consensus 97 ~~~~~~~~~~~~~~~l~V~~~~~~~~~~~~~~~~~~~~~~~~~v~~~p~~~~v~~G~~v~L~C~~~~~-~~~v~W~k 172 (256)
T 3tf7_C 97 AKGTGSKLSFGKGAKLTVSPGGGGSGGGGSGGGGSGGGGSEAAVTQSPRNKVTVTGENVTLSCRQTNS-HNYMYWYR 172 (256)
T ss_dssp CTTCTTCEEECCCEEEEEEC---------------------CCEEESCSEEEEETTCCEEECEEECSC-CSEEEEEE
T ss_pred cCCCccceEECCCeEEEEeCCCCCcCCCCcCcccCCCCcCccEEEecCCEEEEeCCCcEEEEEEcCCC-ceEEEEEE
Confidence 864321 1123344432 1124555555556667799999999999876 67899998
No 186
>3knb_B Obscurin-like protein 1; IG-like, titin, OBSL1, ATP-binding, calmodulin-BIN cardiomyopathy, disease mutation, immunoglobulin domain; 1.40A {Homo sapiens} PDB: 2wp3_O* 2wwm_C 2wwk_O
Probab=99.70 E-value=1.7e-16 Score=80.52 Aligned_cols=69 Identities=23% Similarity=0.376 Sum_probs=57.3
Q ss_pred CCccEEEEEEeccCCCCeeEEeeCCccCCCCC---------CCeEEEecCCCCCCeEEEEEEEcCCCCceeEeeEEEe
Q psy12725 1 MLALKFFTCKYEGNPVKTISWMKDGKPVPDHN---------EPVFRIDSVRKEDKGMYQCVIRNEQESAQASGELKLG 69 (119)
Q Consensus 1 ~g~~~~l~c~~~~~~~~~v~w~~~~~~~~~~~---------~~~l~~~~~~~~d~g~y~C~~~~~~~~~~~~~~~~v~ 69 (119)
.|+.+.|.|.+.|.|.+.|.|+|++..+.... ...|.|.+++.+|.|.|.|.+.|..+.......+.|.
T Consensus 27 ~G~~~~l~C~~~G~P~p~v~W~k~g~~l~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~N~~G~~~~~~~l~V~ 104 (107)
T 3knb_B 27 SGAEAELKCVVLGEPPPVVVWEKGGQQLAASERLSFPADGAEHGLLLTAALPTDAGVYVCRARNAAGEAYAAAAVTVL 104 (107)
T ss_dssp TTSCEEEEEEEEEESCCEEEEEETTEECCCCSSEECCEETTEEEEEESSCCGGGCEEEEEEEEETTEEEEEEEEEEEE
T ss_pred CCCcEEEEEEEEEecCCEEEEEECcccccceeeEEEeecCceEEEEEecCChhhCEEEEEEEEECCCEEEEEEEEEEE
Confidence 48999999999999999999999998875432 2469999999999999999999988766655555553
No 187
>3q5y_A TCR N15 beta; IG, T cell receptor, antigen peptide/MHC, membrane, immune S; HET: EPE; 1.90A {Mus musculus} PDB: 1nfd_B* 3q5t_A
Probab=99.70 E-value=2.8e-16 Score=89.76 Aligned_cols=116 Identities=20% Similarity=0.333 Sum_probs=77.0
Q ss_pred CCccEEEEEEeccCCCCeeEEeeCC--c------------cC-------------CCCCCCeEEEecCCCCCCeEEEEEE
Q psy12725 1 MLALKFFTCKYEGNPVKTISWMKDG--K------------PV-------------PDHNEPVFRIDSVRKEDKGMYQCVI 53 (119)
Q Consensus 1 ~g~~~~l~c~~~~~~~~~v~w~~~~--~------------~~-------------~~~~~~~l~~~~~~~~d~g~y~C~~ 53 (119)
.|+.|.|.|.+.+ +.+.+.|||.. . .. .......|.|.+++.+|+|.|.|.+
T Consensus 16 ~G~~v~L~C~~~~-~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~sL~I~~v~~~D~G~Y~C~~ 94 (240)
T 3q5y_A 16 KGGRSVLTCIPIS-GHSNVVWYQQTLGKELKFLIQHYEKVERDKGFLPSRFSVQQFDDYHSEMNMSALELEDSAMYFCAS 94 (240)
T ss_dssp TTCCEEEEEECCT-TCCEEEEEEECTTSCCEEEEEEETTEEEEECSCCTTEEEEECTTSCEEEEECSCCGGGCEEEEEEE
T ss_pred CCCcEEEEEEeCC-CCceEEEEEECCCCCCEEEEEEcCCccccCcccCCeEEEEeCCCCEEEEEECcCChhHCEEEEEEE
Confidence 4899999999876 77899999821 0 00 0112347999999999999999999
Q ss_pred EcCCC---CceeEeeEEEee---ecCCCeeeec-CCccccCCCCcEEEEeEEcc-CCCC-eEEEEECCEEccc
Q psy12725 54 RNEQE---SAQASGELKLGG---RFDPPVIKES-FSDETLNPGPNYYFKCIASG-NPTP-EISWYLDGKKLVN 117 (119)
Q Consensus 54 ~~~~~---~~~~~~~~~v~~---~~~~~~~~~~-~~~~~~~~g~~~~l~C~~~~-~p~~-~~~W~~~~~~~~~ 117 (119)
.+... .......+.+.. ...+|.+... +....+..|+.+.|.|.+.+ .|.+ .+.|+++|..+..
T Consensus 95 ~~~~~~~~~~~~~~~l~V~~~~~~~~~p~~~~~~~~~~~~~~g~~v~L~C~~~g~~P~~~~v~W~~~g~~l~~ 167 (240)
T 3q5y_A 95 SLRWGDEQYFGPGTRLTVLEDLRNVTPPKVSLFEPSKAEIANKQKATLVCLARGFFPDHVELSWWVNGKEVHS 167 (240)
T ss_dssp ESSTTBCCEECCCEEEEEESCGGGCBCCEEEEECCCHHHHHHHSEEEEEEEEEEEBSSCEEEEEEETTEEECT
T ss_pred ccCCCcceEEcCCEEEEEeccccCCCCCeeEEeCCchhhcccCCceEEEEEEeeEECCCeEEEEEECCEECcC
Confidence 83211 122223444432 1134555432 23334556899999999988 4555 7899999998753
No 188
>4dkd_C Macrophage colony-stimulating factor 1 receptor; dimeric four-helix bundle cytokine, receptor tyrosine kinase glycosylation; HET: NAG BMA; 3.00A {Homo sapiens}
Probab=99.70 E-value=1.5e-16 Score=92.84 Aligned_cols=115 Identities=20% Similarity=0.228 Sum_probs=83.5
Q ss_pred CCccEEEEEEeccCCC--CeeEEeeC-CccCCCC------CCCeEEEecCCCCCCeEEEEEEEcCCCCcee-EeeEEEee
Q psy12725 1 MLALKFFTCKYEGNPV--KTISWMKD-GKPVPDH------NEPVFRIDSVRKEDKGMYQCVIRNEQESAQA-SGELKLGG 70 (119)
Q Consensus 1 ~g~~~~l~c~~~~~~~--~~v~w~~~-~~~~~~~------~~~~l~~~~~~~~d~g~y~C~~~~~~~~~~~-~~~~~v~~ 70 (119)
.|+.+.|.|.+.+ +. +.+.|+++ +..+... ....|.|.+++..|.|.|.|.+.+..+.... ...+.+..
T Consensus 103 ~g~~v~l~C~~~~-~~~~~~v~W~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~n~~~~~~s~~~~l~V~~ 181 (292)
T 4dkd_C 103 EDQDALLPCLLTD-PVLEAGVSLVRVRGRPLMRHTNYSFSPWHGFTIHRAKFIQSQDYQCSALMGGRKVMSISIRLKVQK 181 (292)
T ss_dssp TTSCEECCEEESS-GGGGSSEEEEEGGGCCCCSSCCEECCSSSCCEETTCCGGGCSEEEEEECSTTSCEECCCEEEEEEC
T ss_pred CCCcEEEeeeCCC-CCcceeEEEEecCCCccccCCcccccCCceEEECCCCHHHCeEEEEEEEeCCCceeEEEEEEEEeC
Confidence 3889999999987 54 68999997 4443221 2345899999999999999999987554322 44444432
Q ss_pred ec-CCCeeeecCCccccCCCCcEEEEeEEccCCC-CeEEEEECCEEcc
Q psy12725 71 RF-DPPVIKESFSDETLNPGPNYYFKCIASGNPT-PEISWYLDGKKLV 116 (119)
Q Consensus 71 ~~-~~~~~~~~~~~~~~~~g~~~~l~C~~~~~p~-~~~~W~~~~~~~~ 116 (119)
.. .+|.+...+....+..|+.+.|.|.+.+.|+ +.+.|++++..+.
T Consensus 182 ~~~~~p~i~~~~~~~~~~~g~~v~l~C~~~~~~~~~~~~w~~~~~~~~ 229 (292)
T 4dkd_C 182 VIPGPPALTLVPAELVRIRGEAAQIVCSASSVDVNFDVFLQHNNTKLA 229 (292)
T ss_dssp CCCSSCEEEEESSCBCCCSSSCEEEEEEEEESSSCCEEECCBSSCCCC
T ss_pred CCCCCCeEEccCCceeEecCCCEEEEEEecCCCCceEEEEeCCCcccc
Confidence 11 2777777776666789999999999988765 4688888876543
No 189
>1bec_A 14.3.D T cell antigen receptor; T cell receptor; 1.70A {Mus musculus} SCOP: b.1.1.1 b.1.1.2 PDB: 1jck_A 1l0x_A 1sbb_A 1l0y_A 3c6l_B 1mwa_B* 1g6r_B* 1tcr_B* 2ckb_B 2q86_B* 1lp9_F 2j8u_F 2jcc_F 2uwe_F 3mbe_D* 1d9k_B* 2aq3_A 3mc0_A 3byt_A 3bzd_A ...
Probab=99.70 E-value=8.8e-16 Score=87.71 Aligned_cols=116 Identities=17% Similarity=0.376 Sum_probs=79.0
Q ss_pred CCccEEEEEEeccCCCCeeEEeeCC--ccC-----------------CC--------CCCCeEEEecCCCCCCeEEEEEE
Q psy12725 1 MLALKFFTCKYEGNPVKTISWMKDG--KPV-----------------PD--------HNEPVFRIDSVRKEDKGMYQCVI 53 (119)
Q Consensus 1 ~g~~~~l~c~~~~~~~~~v~w~~~~--~~~-----------------~~--------~~~~~l~~~~~~~~d~g~y~C~~ 53 (119)
.|+.|+|.|.+. .+.+.+.|||.. ... .. .....|.|.+++.+|+|.|.|.+
T Consensus 13 ~G~~v~L~C~~~-~~~~~v~W~r~~~~~~~~~l~~~~~~~~~~~~~~~~R~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~~ 91 (238)
T 1bec_A 13 TGGKVTLSCQQT-NNHNNMYWYRQDTGHGLRLIHYSYGAGSTEKGDIPDGYKASRPSQEQFSLILELATPSQTSVYFCAS 91 (238)
T ss_dssp TTCCEEEEEEES-SCCSEEEEEEECTTSCEEEEEEEEETTEEEECSCCTTCEEECCSSSEEEEEESSCCGGGCEEEEEEE
T ss_pred CCCcEEEEEEeC-CCCceEEEEEECCCCCEEEEEEEeCCCcccCCCccceEEEEecCCCEEEEEEecCCcccCEEEEEEE
Confidence 489999999985 467899999853 110 00 11247999999999999999999
Q ss_pred EcCCC---C--ceeEeeEEEeee---cCCCeeeec-CCccccCCCCcEEEEeEEccC-CCC-eEEEEECCEEccc
Q psy12725 54 RNEQE---S--AQASGELKLGGR---FDPPVIKES-FSDETLNPGPNYYFKCIASGN-PTP-EISWYLDGKKLVN 117 (119)
Q Consensus 54 ~~~~~---~--~~~~~~~~v~~~---~~~~~~~~~-~~~~~~~~g~~~~l~C~~~~~-p~~-~~~W~~~~~~~~~ 117 (119)
.+..+ . ......+.|... ..+|.+... +....+..|+.+.|.|.+.+. |.+ .+.|+++|..+..
T Consensus 92 ~~~~~~~~~~~~~~~~~l~V~~~~~~~~~P~v~~~~~~~~~~~~g~~~~L~C~~~g~~P~~~~v~W~~~g~~~~~ 166 (238)
T 1bec_A 92 GGGRGSYAEQFFGPGTRLTVLEDLRQVTPPKVSLFEPSKAEIANKQKATLVCLARGFFPDHVELSWWVNGKEVHS 166 (238)
T ss_dssp ESCTTCGGGCEECCCEEEEEESCGGGCBCCEEEEECCCSTTCSSSCSCSEEEEEEEEBSCCEEEEEEETTEEECT
T ss_pred ecCCCCccccccCCCEEEEEeccCCCCCCCceEEECCChHHcccCCceEEEEEEeeEeCCCcEEEEEECCEECCC
Confidence 98631 1 112234444321 125555543 333446689999999999886 655 8999999988753
No 190
>2znx_A SCFV; fluorotryptohpan, 5-fluorotryptophan, 19F, single chain FV, allergen, antimicrobial, bacteriolytic enzyme, glycosidase, hydrolase; HET: FTR 1PG; 2.30A {Homo sapiens} PDB: 2znw_A*
Probab=99.70 E-value=5.1e-16 Score=88.89 Aligned_cols=111 Identities=15% Similarity=0.204 Sum_probs=73.8
Q ss_pred CCccEEEEEEeccCCCCeeEEeeCC--ccCC------------C---------CCCCeEEEecCCCCCCeEEEEEEEcCC
Q psy12725 1 MLALKFFTCKYEGNPVKTISWMKDG--KPVP------------D---------HNEPVFRIDSVRKEDKGMYQCVIRNEQ 57 (119)
Q Consensus 1 ~g~~~~l~c~~~~~~~~~v~w~~~~--~~~~------------~---------~~~~~l~~~~~~~~d~g~y~C~~~~~~ 57 (119)
.|+.|+|.|.+.+.+.+.+.|+|+. .... . .....|.|.+++.+|+|.|.|.+.+..
T Consensus 15 ~G~~v~L~C~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~D~G~Y~C~~~n~~ 94 (242)
T 2znx_A 15 PGNSVSLSCRASQSIGNNLHXYQQKSHESPRLLIKYASQSISGIPSRFSGSGSGTDFTLSINSVETEDFGMYFCQQSNSX 94 (242)
T ss_dssp TTCCEEEEEEESSCCTTCEEEEEECTTSCCEEEEETTTEECTTSCTTEEEEEETTEEEEEESSCCGGGCEEEEEEECSSS
T ss_pred CCCcEEEEEEeCCCCCceEEEEEeCCCCCceEEEEeccccCCCCCCCEEEecCCCEEEEEECCCChHHCEEEEEeEecCC
Confidence 4899999999998888899999853 1110 0 012369999999999999999999864
Q ss_pred CCc-eeEeeEEEeeecC----------CCeeeecCCccccCCCCcEEEEeEEccCC--CCeEEEEEC
Q psy12725 58 ESA-QASGELKLGGRFD----------PPVIKESFSDETLNPGPNYYFKCIASGNP--TPEISWYLD 111 (119)
Q Consensus 58 ~~~-~~~~~~~v~~~~~----------~~~~~~~~~~~~~~~g~~~~l~C~~~~~p--~~~~~W~~~ 111 (119)
... .....+.|..... ++.....+....+.+|+.+.|.|.+.+.+ .+.+.|+++
T Consensus 95 ~~~~~~~~~L~V~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~G~~v~L~C~~~g~~~~~~~v~W~k~ 161 (242)
T 2znx_A 95 PYTFGGGTKLEITGGGGSGGGGSGGGGSDIQLQESGPSLVKPSQTLSLTCSVTGDSITSDYXSXIRK 161 (242)
T ss_dssp SCEECCCEEEEEC---------------CCEEEEECCSEECTTSCEEEEEEEESSCGGGSCEEEEEE
T ss_pred ceEECCCEEEEEcCCCCCCcccccccccceeeecCCcceecCCCeEEEEEEEEccccCCcceeeEee
Confidence 321 1223344432110 11122222334578999999999998775 468999984
No 191
>3omz_A Human vdelta1 gamma delta T cell receptor delta1A; immunoglobulin fold, immune surveillance of cell stress PROT A/B, MIC-A/B binding, epithelium; 3.04A {Homo sapiens}
Probab=99.70 E-value=3e-16 Score=90.61 Aligned_cols=111 Identities=14% Similarity=0.254 Sum_probs=72.4
Q ss_pred CCccEEEEEEeccCCCCeeEEeeC--CccC----------------------------CCCCCCeEEEecCCCCCCeEEE
Q psy12725 1 MLALKFFTCKYEGNPVKTISWMKD--GKPV----------------------------PDHNEPVFRIDSVRKEDKGMYQ 50 (119)
Q Consensus 1 ~g~~~~l~c~~~~~~~~~v~w~~~--~~~~----------------------------~~~~~~~l~~~~~~~~d~g~y~ 50 (119)
.|+.|+|.|.+.+.+.+.+.|||. +... .......|.|.+++.+|+|.|.
T Consensus 16 ~G~~v~L~C~~~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~I~~v~~~DsG~Y~ 95 (259)
T 3omz_A 16 TGSSAEITCDLAEGSTGYIHWYLHQEGKAPQRLLYYDSYTSSVVLESGISPGKYDTYGSTRKNLRMILRNLIENDSGVYY 95 (259)
T ss_dssp TTCCEEEECCC-----CEEEEEEECTTSCCEEEEEEETTTCCEEECTTCCBTTEEEECC--CCCEEEESSCCGGGCEEEE
T ss_pred CCCcEEEEEEEccCCCcEEEEEEECCCCCcEEEEEEecCcCccccCCCCCcceeEeecCCCCeEEEEECCCCcccCEEEE
Confidence 489999999998888889999982 1110 0012346999999999999999
Q ss_pred EEEEcCCCC---ceeEeeEEEeeecC--------------CCeeeecCCccccCCCCcEEEEeEEccC-CCCeEEEEEC
Q psy12725 51 CVIRNEQES---AQASGELKLGGRFD--------------PPVIKESFSDETLNPGPNYYFKCIASGN-PTPEISWYLD 111 (119)
Q Consensus 51 C~~~~~~~~---~~~~~~~~v~~~~~--------------~~~~~~~~~~~~~~~g~~~~l~C~~~~~-p~~~~~W~~~ 111 (119)
|.+.+..+. ......+.|..... ++.+...+....+.+|+.+.|.|...+. +.+.+.|+++
T Consensus 96 C~~~~~~~~~~~~~~~~~l~V~~~~~~~~~~~~~~~~~~~~~~v~~~p~~~~v~~G~~v~L~C~~~~~~~~~~v~W~k~ 174 (259)
T 3omz_A 96 CATWDQNYYKKLFGSGTSLVVTDKQGSADDAKKDAAKKDGAQKVTQAQSSVSMPVRKAVTLNCLYETSWWSYYIFWYKR 174 (259)
T ss_dssp EEEECTTSSCEEECCCEEEEEEC------------------CEEECCCCCEEEETTCCEEECCEEECCCSSCEEEEEEE
T ss_pred EEEeeCCccccEECCCCEEEEecCCCCccccccccccccCCeeeEEeCCEEEEcCCCCEEEEEECCCccCCceEEEeee
Confidence 999986541 22223344432111 2344544555667899999999988765 6779999984
No 192
>3qib_D 2B4 beta chain; IG domain, immune system; HET: NAG FUC BMA; 2.70A {Mus musculus}
Probab=99.70 E-value=2.8e-16 Score=91.20 Aligned_cols=116 Identities=19% Similarity=0.335 Sum_probs=77.5
Q ss_pred CCccEEEEEEeccCCCCeeEEeeCC--c----------------------cC----CCCCCCeEEEecCCCCCCeEEEEE
Q psy12725 1 MLALKFFTCKYEGNPVKTISWMKDG--K----------------------PV----PDHNEPVFRIDSVRKEDKGMYQCV 52 (119)
Q Consensus 1 ~g~~~~l~c~~~~~~~~~v~w~~~~--~----------------------~~----~~~~~~~l~~~~~~~~d~g~y~C~ 52 (119)
.|+.|+|.|.+.+ +.+.+.|||.. . .+ .......|.|.+++.+|+|.|.|.
T Consensus 41 ~G~~v~L~C~~~~-~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~sL~I~~v~~~D~G~Y~C~ 119 (270)
T 3qib_D 41 QGQKAKMRCIPEK-GHPVVFWYQQNKNNEFKFLINFQNQEVLQQIDMTEKRFSAECPSNSPCSLEIQSSEAGDSALYLCA 119 (270)
T ss_dssp TTSCEEEEEECCT-TCCEEEEEEECTTCCEEEEEEEETTEEEEECHHHHHHEEEECCTTSCEEEEESSCCGGGCEEEEEE
T ss_pred CCCCEEEEEEecC-CCceEEEEEECCCCCcEEEEEECCCCceecCCccCCcEEEEeCCCcEEEEEECCCCHhHCeEEEEE
Confidence 4899999999865 67899999821 1 00 012345799999999999999999
Q ss_pred EEcCCC----CceeEeeEEEeee---cCCCeeeec-CCccccCCCCcEEEEeEEcc-CCCC-eEEEEECCEEccc
Q psy12725 53 IRNEQE----SAQASGELKLGGR---FDPPVIKES-FSDETLNPGPNYYFKCIASG-NPTP-EISWYLDGKKLVN 117 (119)
Q Consensus 53 ~~~~~~----~~~~~~~~~v~~~---~~~~~~~~~-~~~~~~~~g~~~~l~C~~~~-~p~~-~~~W~~~~~~~~~ 117 (119)
+.+... .......+.+... ..+|.+... +....+..|+.+.|.|.+.+ .|.+ .+.|+++|..+..
T Consensus 120 ~~~~~~~~~~~~~~~~~l~V~~~~~~~~~P~v~~~~~~~~~~~~g~~v~L~C~~~g~~P~~~~v~W~k~g~~l~~ 194 (270)
T 3qib_D 120 SSLNWSQDTQYFGPGTRLLVLEDLKNVFPPEVAVFEPSEAEISHTQKATLVCLATGFYPDHVELSWWVNGKEVHS 194 (270)
T ss_dssp EESCTTCCCCEECCCEEEEEESCSTTCBCCEEEEEECCHHHHHHHSEEEEEEEEEEEBSSCEEEEEEETTEEECT
T ss_pred EecCCCccceEECCcEEEEEccccccccCCceEEECCCccccccCCceEEEEEecceeCCCeEEEEEECCEECCC
Confidence 986421 1112234444321 114544432 22333456899999999988 5656 7999999998754
No 193
>3kld_A Contactin 4, axcam, BIG-2; cell adhesion, protein complex, receptor protein tyrosine phosphatase; HET: NAG; 2.00A {Mus musculus} PDB: 3jxa_A*
Probab=99.69 E-value=3.8e-17 Score=99.01 Aligned_cols=113 Identities=18% Similarity=0.306 Sum_probs=78.2
Q ss_pred CccEEEEEEeccCCCCeeEEeeCCccCCCC-------CCCeEEEecC-CCCCCeEEEEEEEcCCCCce-eEeeEEEeeec
Q psy12725 2 LALKFFTCKYEGNPVKTISWMKDGKPVPDH-------NEPVFRIDSV-RKEDKGMYQCVIRNEQESAQ-ASGELKLGGRF 72 (119)
Q Consensus 2 g~~~~l~c~~~~~~~~~v~w~~~~~~~~~~-------~~~~l~~~~~-~~~d~g~y~C~~~~~~~~~~-~~~~~~v~~~~ 72 (119)
|+.+.|.|.+.|.|.+.|.|+|++..+... ....|.|... +.+|.|.|.|.+.|..+... ....+.+..
T Consensus 23 g~~v~L~C~~~g~P~p~i~W~k~g~~l~~~~~~~~~~~~g~l~i~~~~~~~D~G~Y~C~A~N~~G~~~s~~~~l~v~~-- 100 (384)
T 3kld_A 23 EKKVKLSCEVKGNPKPHIRWKLNGTDVDIGMDFRYSVVDGSLLINNPNKTQDAGTYQCIATNSFGTIVSREAKLQFAY-- 100 (384)
T ss_dssp CSEEEECCEEEEESCCEEEEEETTEECCC----CEEEETTEEEEESCCHHHHCEEEEEEEEETTEEEECCCEEEEEEE--
T ss_pred CCeEEEEeEecCCCCCEEEEEECCEECcCCCCccEEEECCEEEEcCCCCcccCEEEEEEEEcCcccEEecceEEEEec--
Confidence 788999999999999999999999887542 1345666665 67899999999999865432 123333322
Q ss_pred CCCeeeecCCccccCCCCcEEEEeEEc-cCCCCeEEEEECCEEcc
Q psy12725 73 DPPVIKESFSDETLNPGPNYYFKCIAS-GNPTPEISWYLDGKKLV 116 (119)
Q Consensus 73 ~~~~~~~~~~~~~~~~g~~~~l~C~~~-~~p~~~~~W~~~~~~~~ 116 (119)
.++..........+.+|+.+.|.|... +.+.+.+.|++++..+.
T Consensus 101 ~~~~~~~~~~~~~v~~G~~~~l~C~~~~~~~~~~~~W~~~~~~~~ 145 (384)
T 3kld_A 101 LENFKTRTRSTVSVRRGQGMVLLCGPPPHSGELSYAWIFNEYPSY 145 (384)
T ss_dssp ECCCSCCCCCCEEEEETCCEEECCCCCSEESCEEEEEEETTEECC
T ss_pred ccccccCCCCceeEEcCCCeEEecCCCCCCCCeEEEEEECCCCCE
Confidence 122112122234567899999999653 34567899999987754
No 194
>4fqp_A Poliovirus receptor; immunoglobulin-like domain, IG domain, viral entry receptor, adhesion; HET: NAG BMA FUC MAN; 3.60A {Homo sapiens} PDB: 1nn8_R 1dgi_R
Probab=99.69 E-value=1.1e-15 Score=90.31 Aligned_cols=114 Identities=18% Similarity=0.344 Sum_probs=79.3
Q ss_pred CCccEEEEEEeccCCCC-----eeEEeeCCccCCC---------------------------CCCCeEEEecCCCCCCeE
Q psy12725 1 MLALKFFTCKYEGNPVK-----TISWMKDGKPVPD---------------------------HNEPVFRIDSVRKEDKGM 48 (119)
Q Consensus 1 ~g~~~~l~c~~~~~~~~-----~v~w~~~~~~~~~---------------------------~~~~~l~~~~~~~~d~g~ 48 (119)
+|+.|+|.|.+.+.+.+ .+.|+|++..... ....+|.|.+++.+|+|.
T Consensus 14 ~G~~v~L~C~v~~~~~~~~~~~~V~W~k~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~sL~I~~v~~~D~G~ 93 (313)
T 4fqp_A 14 LGDSVTLPCYLQVPNMEVTHVSQLTWARHGESGSMAVFHQTQGPSYSESKRLEFVAARLGAELRNASLRMFGLRVEDEGN 93 (313)
T ss_dssp TTSCEEECCEEECCTTSCCCCCEEEEEETTSSSCSEEEETTTEEEESSTTTEEESSCCTTSCCCBCCEEECSCCGGGCEE
T ss_pred cCCCEEEEEEEECCCCCccceEEEEEEECCCCcceEEEecCCCceeccCcceEEEeeccCCcccceEEEECcCChhhCEE
Confidence 59999999999876544 4899998753210 123569999999999999
Q ss_pred EEEEEEcCCCCceeEeeEEEeeecCCCeeeecCCccccCCCCcEEEEeEE-ccCCCCeEEEEECCEEcc
Q psy12725 49 YQCVIRNEQESAQASGELKLGGRFDPPVIKESFSDETLNPGPNYYFKCIA-SGNPTPEISWYLDGKKLV 116 (119)
Q Consensus 49 y~C~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~g~~~~l~C~~-~~~p~~~~~W~~~~~~~~ 116 (119)
|.|.+.+.. .......+.+.+. .+|..........+..++...+.|.+ .+.|.+.+.|++++..+.
T Consensus 94 Y~C~v~~~~-~~~~~~~~~l~v~-~~P~~~~~~~~~~~~~~~~~~~~C~~~~~~P~~~i~W~~~~~~~~ 160 (313)
T 4fqp_A 94 YTCLFVTFP-QGSRSVDIWLRVL-AKPQNTAEVQKVQLTGEPVPMARCVSTGGRPPAQITWHSDLGGMP 160 (313)
T ss_dssp EEEEEECSS-SCEEEEEEEECCB-BCCEEEEEECCBCCCSSCEEEEEEEEEEEBSCCEEEEEETTCCEE
T ss_pred EEEEEeecc-Ccceeeeeeeeec-cCCcceecccceEeecCceEEEEEEccCccCCcEEEeecCCcccc
Confidence 999886432 2223333444332 35555555555566778888889976 467889999999876543
No 195
>4fom_A Poliovirus receptor-related protein 3; immunoglobulin-like domain, IG domain, cell adhesion; HET: NAG BMA MAN FUC; 3.93A {Homo sapiens}
Probab=99.69 E-value=1.2e-16 Score=94.06 Aligned_cols=114 Identities=22% Similarity=0.282 Sum_probs=76.5
Q ss_pred CCccEEEEEEeccC-CCCeeEEeeCCccCC---------------C------------CCCCeEEEecCCCCCCeEEEEE
Q psy12725 1 MLALKFFTCKYEGN-PVKTISWMKDGKPVP---------------D------------HNEPVFRIDSVRKEDKGMYQCV 52 (119)
Q Consensus 1 ~g~~~~l~c~~~~~-~~~~v~w~~~~~~~~---------------~------------~~~~~l~~~~~~~~d~g~y~C~ 52 (119)
.|+.+.|.|.+.+. +.+.|.|+|++.... . ....+|.|.+++.+|+|.|.|.
T Consensus 13 ~G~~v~L~C~v~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~sL~I~~v~~~D~G~Y~C~ 92 (308)
T 4fom_A 13 WGKNVSLKCLIEVNETITQISWEKIHGKSSQTVAVHHPQYGFSVQGEYQGRVLFKNYSLNDATITLHNIGFSDSGKYICK 92 (308)
T ss_dssp TTSCEEECCBCCCSSCEEEEEEEEESSSCEEEEEEECSSSCEEECTTTTTTEEESCCSSSBCCEEECSCCGGGCEEEEEE
T ss_pred cCCcEEEEEEecCCCCCcEEEEEECCCCCCceEEEecCCCCceecCcccceEEeeccCCCceEEEEccCCHHHCEEEEEE
Confidence 48999999998654 445799998542210 0 1235799999999999999999
Q ss_pred EEcCC-CCceeEeeEEEeeecCCCe-eeecCCccccCCCCcEEEEeEE-ccCCCCeEEEEECCEEcc
Q psy12725 53 IRNEQ-ESAQASGELKLGGRFDPPV-IKESFSDETLNPGPNYYFKCIA-SGNPTPEISWYLDGKKLV 116 (119)
Q Consensus 53 ~~~~~-~~~~~~~~~~v~~~~~~~~-~~~~~~~~~~~~g~~~~l~C~~-~~~p~~~~~W~~~~~~~~ 116 (119)
+.+.. +.......+.+.. .++. ....+.......|+.+.|.|.+ .+.|.+.+.|++++..+.
T Consensus 93 a~n~~~~~~~~~~~~~v~~--~~~~~~~~~~~~~~~~~~~~~~l~C~~~~g~P~~~i~W~~~~~~~~ 157 (308)
T 4fom_A 93 AVTFPLGNAQSSTTVTVLV--EPTVSLIKGPDSLIDGGNETVAAICIAATGKPVAHIDWEGDLGEME 157 (308)
T ss_dssp EEETTTEEEEEEEEEEEEB--CCEEEEEECSSCCCTTCSCEEEEEEEEEEEBSCCEEEECCCSSBCC
T ss_pred EeeCCCcceeeeeEEEeee--ccccccccccceeEEcCCceEEEEEEecCCcCCceEEEEECCcccc
Confidence 98753 2233333333332 2222 2223334445677899999975 678999999999987664
No 196
>1svz_A Immunoglobulin;, single-chain FV fragment 1696; antibody-antigen complex, HIV inhibiting antibody; 1.89A {Mus musculus} PDB: 1jp5_A
Probab=99.69 E-value=5.7e-16 Score=88.81 Aligned_cols=111 Identities=16% Similarity=0.285 Sum_probs=73.4
Q ss_pred CCccEEEEEEeccCC-----CCeeEEeeCC--ccCC-------------C--------CCCCeEEEecCCCCCCeEEEEE
Q psy12725 1 MLALKFFTCKYEGNP-----VKTISWMKDG--KPVP-------------D--------HNEPVFRIDSVRKEDKGMYQCV 52 (119)
Q Consensus 1 ~g~~~~l~c~~~~~~-----~~~v~w~~~~--~~~~-------------~--------~~~~~l~~~~~~~~d~g~y~C~ 52 (119)
.|+.|+|.|.+.+.+ .+.+.|+|+. ..+. . .....|.|.+++.+|+|.|.|.
T Consensus 15 ~G~~v~L~C~~~~~~~~~~~~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~D~G~Y~C~ 94 (247)
T 1svz_A 15 LGDQASISCRSSQTIVHNNGNTYLEWYLQKPGQSPQLLIYKVSNRFSGVPDRFSGSGSGTDFTLKISRVEAEDLGIYYCF 94 (247)
T ss_dssp TTCCEEEEEEESSCCBCTTSCBCEEEEEECTTSCEEEEEETTTEECTTCCTTEEEEEETTEEEEEESSCCGGGCEEEEEE
T ss_pred CCCCEEEEEeCCCcccccCCCceEEEEEECCCCCceEEEEEecccCCCCCCcEEeccCCCEEEEEECCCCHHHCEEEEEE
Confidence 489999999998876 6899999843 1110 0 0123699999999999999999
Q ss_pred EEcCCCC-ceeEeeEEEeeecC----------CCeeeecCCccccCCCCcEEEEeEEccCC--CCeEEEEEC
Q psy12725 53 IRNEQES-AQASGELKLGGRFD----------PPVIKESFSDETLNPGPNYYFKCIASGNP--TPEISWYLD 111 (119)
Q Consensus 53 ~~~~~~~-~~~~~~~~v~~~~~----------~~~~~~~~~~~~~~~g~~~~l~C~~~~~p--~~~~~W~~~ 111 (119)
+.+.... ......+.|..... ++.....+....+.+|+.+.|.|.+.+.+ .+.+.|+++
T Consensus 95 ~~n~~~~~~~~~~~l~V~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~G~~v~L~C~~~~~~~~~~~v~W~k~ 166 (247)
T 1svz_A 95 QGSHFPPTFGGGTKLEIKGGGGSGGGGSGGGGSEVQLQQSGPELKKPGETVKISCKATNYAFTDYSMHWVKQ 166 (247)
T ss_dssp ECSSSSCEECCCEEEEEC---------------CCEEEECCCEEECTTCCEEEEEEEESSCGGGSCEEEEEE
T ss_pred EccCCccEECCCEEEEEECCccccccccccccCceEEeCCCceeecCCCcEEEEEEEcCcccCCcEEEEEEe
Confidence 9886432 11223444432110 12122223334588999999999998874 458999985
No 197
>3knb_A Titin; IG-like, titin, OBSL1, ATP-binding, calmodulin-BIN cardiomyopathy, disease mutation, immunoglobulin domain; 1.40A {Homo sapiens} PDB: 3q5o_A 2wp3_T* 2wwk_T 2wwm_D 2y9r_T*
Probab=99.69 E-value=1.7e-16 Score=79.62 Aligned_cols=68 Identities=22% Similarity=0.458 Sum_probs=56.5
Q ss_pred CCccEEEEEEeccCCCCeeEEeeCCccCCCC-----------CCCeEEEecCCCCCCeEEEEEEEcCCCCceeEeeEEE
Q psy12725 1 MLALKFFTCKYEGNPVKTISWMKDGKPVPDH-----------NEPVFRIDSVRKEDKGMYQCVIRNEQESAQASGELKL 68 (119)
Q Consensus 1 ~g~~~~l~c~~~~~~~~~v~w~~~~~~~~~~-----------~~~~l~~~~~~~~d~g~y~C~~~~~~~~~~~~~~~~v 68 (119)
.|+.+.|.|.+.|.|.+.+.|++++..+... ....|.|.+++.+|.|.|.|.+.|..+.......+.|
T Consensus 19 ~G~~~~l~C~~~g~P~p~v~W~k~g~~i~~~~~~~~~~~~~~~~~~L~I~~~~~~D~G~Y~C~a~N~~G~~~~~~~l~V 97 (100)
T 3knb_A 19 EGKVLTVACAFTGEPTPEVTWSCGGRKIHSQEQGRFHIENTDDLTTLIIMDVQKQDGGLYTLSLGNEFGSDSATVNIHI 97 (100)
T ss_dssp TTSEEEEEEEEEEESCCEEEEEETTEECCTTGGGTEEEEECSSEEEEEESSCCGGGCEEEEEEEEETTEEEEEEEEEEE
T ss_pred CCCeEEEEEEEEEecCCEEEEEECceEeeeeccceeeeecccceEEEEEcCCCccCCEEEEEEEEECCCEEEEEEEEEE
Confidence 4899999999999999999999999877542 1246899999999999999999999876655555555
No 198
>3juy_B 3B3 single chain variant HIV-1 antibody; envelope protein GP120, broadly neutralizing antibody, 3B3 single chain variable fragment, immune system; 2.50A {Homo sapiens}
Probab=99.69 E-value=6e-16 Score=89.20 Aligned_cols=110 Identities=19% Similarity=0.348 Sum_probs=75.8
Q ss_pred CCccEEEEEEeccC--CCCeeEEeeCC--ccCC----------------------------CCCCCeEEEecCCCCCCeE
Q psy12725 1 MLALKFFTCKYEGN--PVKTISWMKDG--KPVP----------------------------DHNEPVFRIDSVRKEDKGM 48 (119)
Q Consensus 1 ~g~~~~l~c~~~~~--~~~~v~w~~~~--~~~~----------------------------~~~~~~l~~~~~~~~d~g~ 48 (119)
.|+.|+|.|.+.+. +.+.+.|||.. ..+. ......|.|.+++.+|+|.
T Consensus 20 ~G~~v~L~C~~~~~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~~L~I~~v~~~DsG~ 99 (256)
T 3juy_B 20 PGASVKVSCQASGYRFSHFTVHWVRQAPGQRFEWMGWINPYNGNKEFSAKFQDRVTFTADTSANTAYMELRSLRSADTAV 99 (256)
T ss_dssp TTCCEEEEEEEESSCGGGSCEEEEEECTTSCCEEEEEEETTTTEEEECTTTTTTEEEEEETTTTEEEEEECSCCGGGCEE
T ss_pred CCCeEEEEEEeecccccCceEEEEEECCCCCcEEEEEEEcCCCcEeecccCcceEEEEEecCCCEEEEEECCCCcccCEE
Confidence 48999999999873 56789999732 1100 0112359999999999999
Q ss_pred EEEEEEcC------------CCCceeEeeEEEeeecC------------CCeeeecCCccccCCCCcEEEEeEEccCCC-
Q psy12725 49 YQCVIRNE------------QESAQASGELKLGGRFD------------PPVIKESFSDETLNPGPNYYFKCIASGNPT- 103 (119)
Q Consensus 49 y~C~~~~~------------~~~~~~~~~~~v~~~~~------------~~~~~~~~~~~~~~~g~~~~l~C~~~~~p~- 103 (119)
|.|.+.+. .........+.|..... ++.+...+....+.+|+.++|.|.+.+.+.
T Consensus 100 Y~C~~~~~~~~~~~~~~~~~~~~~~~~~~l~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~G~~v~L~C~~~~~~~~ 179 (256)
T 3juy_B 100 YYCARVGEWGWDDSPYDNYYMDVWGKGTTVIVSSGGGGSGGGGSGGGGSEIVLTQAPGTLSLSPGERATFSCRSSHSIRS 179 (256)
T ss_dssp EEEEECCCCCTTCCTTTTCSCCEECCCEEEEECSCC----------CCCCCCEEEECSEEEECTTSCEEEEEEESSCCTT
T ss_pred EEEeEEeccccccccccccceeEECCceEEeecCCcccccccccCCCcceeEEEecCCeEEEeCCCCEEEEEEECCCcCC
Confidence 99999886 11122233444432111 344555566667889999999999988776
Q ss_pred CeEEEEE
Q psy12725 104 PEISWYL 110 (119)
Q Consensus 104 ~~~~W~~ 110 (119)
+.+.|++
T Consensus 180 ~~v~W~k 186 (256)
T 3juy_B 180 RRVAWYQ 186 (256)
T ss_dssp CCEEEEE
T ss_pred eeEEEEE
Confidence 7999998
No 199
>1l6x_A Immunoglobulin gamma-1 heavy chain constant regio; IGG1 FC, FC complex, immune system; HET: NAG BMA MAN GAL FUL; 1.65A {Homo sapiens} SCOP: b.1.1.2 b.1.1.2 PDB: 2iwg_A* 3v7m_A* 3d6g_A* 3agv_A* 1oqo_A* 1oqx_A* 3v95_A* 2wah_A* 3sgj_A* 3sgk_A* 2dtq_A* 2dts_A* 3ave_A* 3ay4_A* 3do3_A* 2gj7_A* 1t83_A* 1t89_A* 1dn2_A* 3dnk_A ...
Probab=99.68 E-value=4.7e-16 Score=87.18 Aligned_cols=116 Identities=17% Similarity=0.313 Sum_probs=72.6
Q ss_pred CCccEEEEEEeccCC----CCeeEEeeCCccCCCC--------CCCeEEEe---cCCCCC---CeEEEEEEEcCCCCcee
Q psy12725 1 MLALKFFTCKYEGNP----VKTISWMKDGKPVPDH--------NEPVFRID---SVRKED---KGMYQCVIRNEQESAQA 62 (119)
Q Consensus 1 ~g~~~~l~c~~~~~~----~~~v~w~~~~~~~~~~--------~~~~l~~~---~~~~~d---~g~y~C~~~~~~~~~~~ 62 (119)
.|+.+.|.|.+.+.+ ...|.|+|++..+... ....+.+. .+...| +|.|+|.+.+..+....
T Consensus 17 ~G~~v~L~C~~~g~~p~~~~~~v~W~k~~~~~~~~~~~~~~~~~~g~~~~~~~l~i~~~d~~d~g~Y~C~a~n~~~~~~~ 96 (207)
T 1l6x_A 17 ISRTPEVTCVVVDVSHEDPEVKFNWYVDGVEVHNAKTKPREEQYNSTYRVVSVLTVLHQDWLNGKEYKCKVSNKALPAPI 96 (207)
T ss_dssp TTSCCEEEEEEEEECSSSCCCEEEEEETTEEECCCEECCCEECTTSCEEEEEEEECCHHHHHTTCCEEEEEECTTSSSCE
T ss_pred cCCceEEEEEEecccCCCCCeEEEEEECCccccCcccCCceeccCCcEEEEEEEEEEHHHccCCceEEEEEEcCcCCcce
Confidence 489999999998764 3489999998654321 12233332 234444 99999999997654322
Q ss_pred EeeEEEe-eecCCCeeeecCCccccCCCCcEEEEeEEccC-CCC-eEEEEECCEEcc
Q psy12725 63 SGELKLG-GRFDPPVIKESFSDETLNPGPNYYFKCIASGN-PTP-EISWYLDGKKLV 116 (119)
Q Consensus 63 ~~~~~v~-~~~~~~~~~~~~~~~~~~~g~~~~l~C~~~~~-p~~-~~~W~~~~~~~~ 116 (119)
...+.+. ....+|.+...+.......|..+.|.|.+.|. |.+ .+.|+++|..+.
T Consensus 97 ~~~v~~~~~~~~~P~v~~~~~~~~~~~~~~~~L~C~~~g~~P~~~~v~W~k~g~~~~ 153 (207)
T 1l6x_A 97 EKTISKAKGQPREPQVYTLPPSRDELTKNQVSLTCLVKGFYPSDIAVEWESNGQPEN 153 (207)
T ss_dssp EEEECCCCSCCBCCEEEEECCCGGGGGSSEEEEEEEEEEEBSSCCEEEEEETTEEEC
T ss_pred EEEeccCCCCCcCCEEEEECCChHHhcCCcEEEEEEEeCeECCCeEEEEEECCeecc
Confidence 2222210 11235665544433222345569999999885 443 899999998764
No 200
>1bih_A Hemolin; insect immunity, LPS-binding, homophilic adhesion; 3.10A {Hyalophora cecropia} SCOP: b.1.1.4 b.1.1.4 b.1.1.4 b.1.1.4
Probab=99.68 E-value=4.8e-16 Score=94.10 Aligned_cols=115 Identities=19% Similarity=0.232 Sum_probs=82.4
Q ss_pred CCccEEEEEEe-ccCCCCeeEEeeCCc---cCC----------CCCCCeEEEecCCCCCCe---EEEEEEEcCCCCceeE
Q psy12725 1 MLALKFFTCKY-EGNPVKTISWMKDGK---PVP----------DHNEPVFRIDSVRKEDKG---MYQCVIRNEQESAQAS 63 (119)
Q Consensus 1 ~g~~~~l~c~~-~~~~~~~v~w~~~~~---~~~----------~~~~~~l~~~~~~~~d~g---~y~C~~~~~~~~~~~~ 63 (119)
.|+.+.|.|.+ .+.|.+.+.|++++. ... ......|.|..++..|.| .|.|.+.+..+.....
T Consensus 114 ~G~~v~l~C~~~~~~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~~~~Y~C~a~n~~~~~~~~ 193 (395)
T 1bih_A 114 EGRPFQLDCVLPNAYPKPLITWKKRLSGADPNADVTDFDRRITAGPDGNLYFTIVTKEDVSDIYKYVCTAKNAAVDEEVV 193 (395)
T ss_dssp TTEEEEECCCCCEEESCCEEEEEEEETTSCGGGCCCCCCTTEEECTTSCEEEEEECGGGCCSSEEEEEEEECTTCSSCEE
T ss_pred eCCcEEEEecCCCCCCCCeEEEEecCCCcCcccccccccccEEEcCCCcEEEEEEeeccCCCceEEEEEEEecccceEEE
Confidence 38899999996 677889999999751 111 123457999999999999 9999999987654433
Q ss_pred eeEEE-eeec---------CCCeeeecCCccccCCCCcEEEEeEEccCCCCeEEEEECCEEccc
Q psy12725 64 GELKL-GGRF---------DPPVIKESFSDETLNPGPNYYFKCIASGNPTPEISWYLDGKKLVN 117 (119)
Q Consensus 64 ~~~~v-~~~~---------~~~~~~~~~~~~~~~~g~~~~l~C~~~~~p~~~~~W~~~~~~~~~ 117 (119)
..... .... .+|.+ .+....+.+|+.+.|.|.+.+.|.+.+.|+++|..+..
T Consensus 194 ~~~~~~~~~~~~~~~~~~~~~p~~--~~~~~~~~~G~~v~l~C~~~g~p~~~i~W~~~g~~~~~ 255 (395)
T 1bih_A 194 LVEYEIKGVTKDNSGYKGEPVPQY--VSKDMMAKAGDVTMIYCMYGSNPMGYPNYFKNGKDVNG 255 (395)
T ss_dssp EEEEEECCCBCCSSCCCCCCEEEE--ECCSEEEETTSCEEEEEEEECSSCCCCEEEETTEECCC
T ss_pred eeeEEecccccccccccCCcCcee--cCCceEEECCCcEEEEEEeccCCCCeEEEEECCEEcCC
Confidence 22211 1100 01222 23345678999999999999999999999999988753
No 201
>3v2a_R Vascular endothelial growth factor receptor 2; IG-homology domain, vegfr-2, growth factor receptor, VEGF LI hormone-signaling protein complex, angiogenesis; 3.20A {Homo sapiens} PDB: 3v6b_R
Probab=99.68 E-value=9.9e-17 Score=103.99 Aligned_cols=114 Identities=19% Similarity=0.322 Sum_probs=50.1
Q ss_pred CCccEEEEEEeccC--CCCeeEEeeCCccCCCC-----------------CCCeEEEecCCCCCCeEEEEEEEcCCCCce
Q psy12725 1 MLALKFFTCKYEGN--PVKTISWMKDGKPVPDH-----------------NEPVFRIDSVRKEDKGMYQCVIRNEQESAQ 61 (119)
Q Consensus 1 ~g~~~~l~c~~~~~--~~~~v~w~~~~~~~~~~-----------------~~~~l~~~~~~~~d~g~y~C~~~~~~~~~~ 61 (119)
.|+.+.|.|.+.+. +...+.|++++..+... ....|.|..++..|.|.|.|.+.+..+...
T Consensus 238 ~G~~v~L~C~~~~~~~~~~~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~~~~~~~~~~ 317 (772)
T 3v2a_R 238 VGEKLVLNCTARTELNVGIDFNWEYPSSKHQHKKLVNRDLKTQSGSEMKKFLSTLTIDGVTRSDQGLYTCAASSGLMTKK 317 (772)
T ss_dssp TTCCEEEEEEEEECTTCCCEEEEECC--------CEEEEC-----CCCEEEEEEEEESSCCSTTCSEEEEEEECSSCEEE
T ss_pred cCCcEEEEEEEecCCCCceeEEEecCCccCCCceeeeccccccccccceEEEEEEEECcCCcCCCeEEEEEEEcCCccee
Confidence 48999999999874 45689999987754221 124689999999999999999998766544
Q ss_pred eEeeEEEeeecCCCeeeecC---CccccCCCCcEEEEeEEccCCCCeEEEEECCEEccc
Q psy12725 62 ASGELKLGGRFDPPVIKESF---SDETLNPGPNYYFKCIASGNPTPEISWYLDGKKLVN 117 (119)
Q Consensus 62 ~~~~~~v~~~~~~~~~~~~~---~~~~~~~g~~~~l~C~~~~~p~~~~~W~~~~~~~~~ 117 (119)
....+.+. .+|.+...+ ....+.+|+.+.|.|.+.+.|.+.+.|+++|..+..
T Consensus 318 ~~~~l~V~---~~p~~~~~~~~~~~~~v~~G~~v~l~C~~~~~p~~~v~W~~~g~~l~~ 373 (772)
T 3v2a_R 318 NSTFVRVH---EKPFVAFGSGMESLVEATVGERVRIPAKYLGYPPPEIKWYKNGIPLES 373 (772)
T ss_dssp EEEEEEEE---CCCC--------------------------------------------
T ss_pred EEEEEEEe---CCCeeEeccCCCCcEEEcCCCcEEEEEEEeeeCCCeEEEEECCEeCCC
Confidence 44445443 345443322 234578899999999999989999999999987653
No 202
>2xqy_G A13-D6.3 monoclonal antibody, envelope glycoprotein H; immune system-viral protein complex, envelope protein; HET: NAG; 2.05A {Mus musculus}
Probab=99.68 E-value=3e-16 Score=90.95 Aligned_cols=115 Identities=17% Similarity=0.293 Sum_probs=76.3
Q ss_pred CCccEEEEEEeccCC--CCeeEEeeCC--ccC------C-------------C---------CCCCeEEEecCCCCCCeE
Q psy12725 1 MLALKFFTCKYEGNP--VKTISWMKDG--KPV------P-------------D---------HNEPVFRIDSVRKEDKGM 48 (119)
Q Consensus 1 ~g~~~~l~c~~~~~~--~~~v~w~~~~--~~~------~-------------~---------~~~~~l~~~~~~~~d~g~ 48 (119)
.|+.|+|.|.+.+.+ .+.+.|||+. ..+ . . .....|.|.+++.+|+|.
T Consensus 20 ~G~~v~L~C~~~~~~~~~~~v~W~r~~~g~~~~~l~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~sL~I~~v~~~DsG~ 99 (261)
T 2xqy_G 20 PGASVKMSCKASGYSFTSYWMNWVKQRPGRGLEWIGRIDPSDNETHYNQDFKDKVTLTVDKSSSTVYIQLSSLTSEDSAV 99 (261)
T ss_dssp TTCCEEEEEEEESSCGGGSCEEEEEECTTSCEEEEEEECTTTCCEEECGGGTTTEEEEEEGGGTEEEEEECSCCGGGCEE
T ss_pred CCCCEEEEEEeCCcccCCceEEEEEeCCCCCcEEEEEEecCCCceeeCCccCCcEEEEecCCCCEEEEEEcCCCcccCeE
Confidence 489999999998765 5789999863 211 0 0 012479999999999999
Q ss_pred EEEEEEcCCCC---ceeEeeEEEee-ecCCCeeeecCCccccCCCCcEEEEeEEccC-CCC-eEEEEECCEEc
Q psy12725 49 YQCVIRNEQES---AQASGELKLGG-RFDPPVIKESFSDETLNPGPNYYFKCIASGN-PTP-EISWYLDGKKL 115 (119)
Q Consensus 49 y~C~~~~~~~~---~~~~~~~~v~~-~~~~~~~~~~~~~~~~~~g~~~~l~C~~~~~-p~~-~~~W~~~~~~~ 115 (119)
|.|.+.+.... ......+.|.. ...+|.+........+..|+.+.|.|.+.+. |.+ .+.|++++..+
T Consensus 100 Y~C~~~~~~~~~~~~~~~~~L~V~~~~~~~P~v~~~~p~~~v~~g~~v~L~C~~~g~~P~~i~v~W~k~g~~~ 172 (261)
T 2xqy_G 100 YYCGRLGYVYGFDYWGQGTTLTVSSAKTTAPSVYPLAPVCGDTTGSSVTLGCLVKGYFPEPVTLTWNSGSLSS 172 (261)
T ss_dssp EEEEEECTTSSEEEECCCEEEEECSSCCBCCEEEEECCCCC--CCSEEEEEEEEEEEBSSCCEEEEGGGTCCT
T ss_pred EEEEEecCCCcceEECCCEEEEEccCCCCCCeEEEeCCCccccCCCcEEEEEEEEeEeCCCCEEEEecCCCcC
Confidence 99999985321 11223444432 1124555443333346679999999999875 666 89999988654
No 203
>3ux9_B SCFV antibody; five helices, long loop connecting helix, hydrophobic intera cytokine-immune system complex; 2.80A {Homo sapiens}
Probab=99.68 E-value=7.3e-16 Score=88.77 Aligned_cols=110 Identities=19% Similarity=0.309 Sum_probs=72.9
Q ss_pred CCccEEEEEEeccC--CCCeeEEeeCC--ccCC------------CC---------CCCeEEEecCCCCCCeEEEEEEEc
Q psy12725 1 MLALKFFTCKYEGN--PVKTISWMKDG--KPVP------------DH---------NEPVFRIDSVRKEDKGMYQCVIRN 55 (119)
Q Consensus 1 ~g~~~~l~c~~~~~--~~~~v~w~~~~--~~~~------------~~---------~~~~l~~~~~~~~d~g~y~C~~~~ 55 (119)
.|+.|+|.|.+.+. +.+.+.|||.. .... .. ....|.|.+++.+|+|.|.|.+.+
T Consensus 16 ~G~~v~L~C~~~~~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~DsG~Y~C~~~~ 95 (256)
T 3ux9_B 16 PGQRVTISCSGSSSNIGSNYVSWYQQLPGTAPKLLIYDNNQRPSGVPDRFSGSKSGTSASLAITGLQSEDEADYYCQVRD 95 (256)
T ss_dssp TTCCEEEEEECCTTTTTTSCCEEEEECTTSCCEEEEBTTTBCCTTCCTTEEEEEETTEEEEEECSCCGGGCEEEEEEEEE
T ss_pred CCCcEEEEEecCCCCCCCceEEEEEECCCCCCEEEEEecCCCCCCcCCcEEEEccCCEEEEEECCCChhhCEEEEEEEEE
Confidence 48999999999876 67899999842 1110 00 123699999999999999999988
Q ss_pred CCCC---ceeEeeEEEeeecC------------------CCeeeecCCccccCCCCcEEEEeEEccCC--CCeEEEEEC
Q psy12725 56 EQES---AQASGELKLGGRFD------------------PPVIKESFSDETLNPGPNYYFKCIASGNP--TPEISWYLD 111 (119)
Q Consensus 56 ~~~~---~~~~~~~~v~~~~~------------------~~~~~~~~~~~~~~~g~~~~l~C~~~~~p--~~~~~W~~~ 111 (119)
..+. ......+.|..... .+.+.. +....+.+|+.+.|.|.+.+.+ .+.+.|+++
T Consensus 96 ~~~~~~~~~~~~~l~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~v~~G~~v~L~C~~~~~~~~~~~v~W~r~ 173 (256)
T 3ux9_B 96 NNENEWVFGGGTKLTVLGSGGSTITSYNVYYTKLSSSGSEVQLVE-SGGGLVQPGGSLRLSCAASGFTFSSYAMSWVRQ 173 (256)
T ss_dssp TTTTEEEECCCEEEEEC----------------------CCEEEE-ECCEEECTTCCEEEEEEEESSCGGGSEEEEEEE
T ss_pred CCCCceEECCCEEEEEECCCCCcCccceeEEeecCCCccceeEEc-CCCeEEcCCCeEEEEEEEeCCcccccEEEEEEE
Confidence 5432 11223344432110 112222 2334578999999999998776 678999985
No 204
>2eo9_A Roundabout homolog 1; beta-sandwich, IG-fold, H-ROBO-1, deleted in U twenty twenty, neurogenesis, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.68 E-value=4.7e-16 Score=80.10 Aligned_cols=88 Identities=27% Similarity=0.424 Sum_probs=65.1
Q ss_pred CCccEEEEEEeccCCCCeeEEeeCCccCCCC-------CCCeEEEecCCCCCCeEEEEEEEcCCCCceeEeeEEEeeecC
Q psy12725 1 MLALKFFTCKYEGNPVKTISWMKDGKPVPDH-------NEPVFRIDSVRKEDKGMYQCVIRNEQESAQASGELKLGGRFD 73 (119)
Q Consensus 1 ~g~~~~l~c~~~~~~~~~v~w~~~~~~~~~~-------~~~~l~~~~~~~~d~g~y~C~~~~~~~~~~~~~~~~v~~~~~ 73 (119)
.|+.+.|.|.+.+.|.+.+.|++++..+... ....|.|.+++.+|.|.|.|.+.|..+.......+.|... .
T Consensus 22 ~G~~v~l~C~~~g~p~p~i~W~k~g~~~~~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~a~n~~g~~~~~~~l~V~~~-~ 100 (118)
T 2eo9_A 22 VDGTFVLSCVATGSPVPTILWRKDGVLVSTQDSRIKQLENGVLQIRYAKLGDTGRYTCIASTPSGEATWSAYIEVQEF-G 100 (118)
T ss_dssp TTCEEEEECBCCCSSCCEEEEEESSSBCCTTSTTEEEEETTEEEEESCCGGGCCCEEEEEECSSCEEEEECCEEEECC-S
T ss_pred CCCeEEEEEEEEecCCCEEEEEECCEECcCCCCeEEEccCCEEEEccCCcCCCEEEEEEEEcCCCcEEEEEEEEEEeC-C
Confidence 4889999999999999999999998877532 2457999999999999999999999877666666666532 2
Q ss_pred CCeeeecCCccccCCC
Q psy12725 74 PPVIKESFSDETLNPG 89 (119)
Q Consensus 74 ~~~~~~~~~~~~~~~g 89 (119)
.|.+...+....+.+|
T Consensus 101 ~p~~~~~~~~~~~~~G 116 (118)
T 2eo9_A 101 VPVQPPRPTDPNLIPS 116 (118)
T ss_dssp CCCCCCCCCCCCCCCC
T ss_pred CCccCCCCCCCccCCC
Confidence 2333333434444444
No 205
>1iga_A IGA1; immunoglobulin; NMR {Homo sapiens} PDB: 2esg_A 2qtj_A 3chn_A 1r70_B 3cm9_A
Probab=99.67 E-value=1e-15 Score=94.98 Aligned_cols=116 Identities=15% Similarity=0.199 Sum_probs=79.8
Q ss_pred CCccEEEEEEeccCCC---CeeEEeeCCccCCC-------C------CCCeEEEecCCCCCCeEEEEEEEcCCCCceeEe
Q psy12725 1 MLALKFFTCKYEGNPV---KTISWMKDGKPVPD-------H------NEPVFRIDSVRKEDKGMYQCVIRNEQESAQASG 64 (119)
Q Consensus 1 ~g~~~~l~c~~~~~~~---~~v~w~~~~~~~~~-------~------~~~~l~~~~~~~~d~g~y~C~~~~~~~~~~~~~ 64 (119)
.|+.+.|.|.+.+.+. +.|.| +++..... . ....|.|..+...|.|.|+|.+.+..+......
T Consensus 261 ~G~~v~L~C~~~g~~p~~~~~i~W-~~~~~~~~~~~~~~~~~~g~~~~~~~L~I~~~~~~d~G~Y~C~a~n~~~~~~~~~ 339 (475)
T 1iga_A 261 LGSEANLTCTLTGLRDASGVTFTW-TPSSGKSAVQGPPERDLCGCYSVSSVLPGCAEPWNHGKTFTCTAAYPESKTPLTA 339 (475)
T ss_pred cCCceEEEEEEEcccCCCceEEEE-CCCCcCCccccCceECCCCCEEEEEEEEEchHHhccCCcEEEEEEcCCCCCceEE
Confidence 4899999999987643 58999 43322211 0 113588899999999999999999876543333
Q ss_pred eEEEeeecCCCeeeecCCc-cccCCCCcEEEEeEEccCCC--CeEEEEECCEEccc
Q psy12725 65 ELKLGGRFDPPVIKESFSD-ETLNPGPNYYFKCIASGNPT--PEISWYLDGKKLVN 117 (119)
Q Consensus 65 ~~~v~~~~~~~~~~~~~~~-~~~~~g~~~~l~C~~~~~p~--~~~~W~~~~~~~~~ 117 (119)
.+.+.....+|.+...+.. ..+..|+.+.|.|.+.+.++ +.+.|+++|..+..
T Consensus 340 ~v~~~~~~~~P~v~~~~~~~~~v~~g~~~~L~C~~~g~~P~~~~v~W~k~g~~l~~ 395 (475)
T 1iga_A 340 TLSKSGNTFRPEVHLLPPPSEELALNELVTLTCLARGFSPKDVLVRWLQGSQELPR 395 (475)
T ss_pred EeecCCCCCCCeEEEECCChHHhccCCceEEEEEEeeeECCCCEEEEEECCEECCC
Confidence 3322122346766654433 23678999999999988643 48999999998754
No 206
>2oz4_A Intercellular adhesion molecule 1; IGSF domain, structural plasticity, cell-surface dimerizatio adhesion; HET: NAG FUC; 2.70A {Homo sapiens} SCOP: b.1.1.3 b.1.1.4 b.1.1.4 PDB: 1p53_A*
Probab=99.67 E-value=8.6e-16 Score=88.87 Aligned_cols=108 Identities=16% Similarity=0.302 Sum_probs=77.7
Q ss_pred CCccEEEEEEecc-CCCC--eeEEeeCCccCCCC---CCCeEEEecC---CCCCCeE--EEEEEEcCCCCceeEeeEEEe
Q psy12725 1 MLALKFFTCKYEG-NPVK--TISWMKDGKPVPDH---NEPVFRIDSV---RKEDKGM--YQCVIRNEQESAQASGELKLG 69 (119)
Q Consensus 1 ~g~~~~l~c~~~~-~~~~--~v~w~~~~~~~~~~---~~~~l~~~~~---~~~d~g~--y~C~~~~~~~~~~~~~~~~v~ 69 (119)
.|+.+.|.|.+.+ .|.+ .+.|++++..+... ....+.+..+ +..|.|. |.|.+.+..+.......+.+.
T Consensus 17 ~G~~v~l~C~~~g~~p~p~~~v~W~k~~~~l~~~~~~~~~~~~~~~~~~~~~~d~g~g~Y~C~a~n~~~~~~~~~~l~V~ 96 (265)
T 2oz4_A 17 VDTQGTVVCSLDGLFPVSEAQVHLALGDQRLNPTVTYGNDSFSAKASVSVTAEDEGTQRLTCAVILGNQSQETLQTVTIY 96 (265)
T ss_dssp TTEEEEEEEEEESCSCGGGCEEEEEETTEECCCEEEECSSEEEEEEEEEECGGGCEEEEEEEEEEETTEEEEEEEEEEEE
T ss_pred cCCCEEEEEEccCCCCCcceEEEEEeCCEECCceEeeCCCeEEEEeecccccccCCcceEEEEEecCCCCcEEEEEEEEe
Confidence 4899999999998 6766 99999999877531 2345555555 6778775 999999986655545555553
Q ss_pred eecCCCeeeecCCccccCCCCcEEEEeEEccCCCCeEEEEECCEEc
Q psy12725 70 GRFDPPVIKESFSDETLNPGPNYYFKCIASGNPTPEISWYLDGKKL 115 (119)
Q Consensus 70 ~~~~~~~~~~~~~~~~~~~g~~~~l~C~~~~~p~~~~~W~~~~~~~ 115 (119)
.. .+|.+.. ....+.+|+.+.|.|.+. |.+.+.| +|..+
T Consensus 97 ~~-p~p~~~~--~~~~v~~G~~v~l~C~~~--p~~~i~W--~g~~~ 135 (265)
T 2oz4_A 97 SF-PAPNVIL--TKPEVSEGTEVTVKCEAH--PRAKVTL--NGVPA 135 (265)
T ss_dssp CC-CCCEEEE--SCSEEETTCEEEEEEECC--TTSEEEE--SSCSS
T ss_pred CC-CCceeec--CCceecCCCcEEEEEEcc--CCCEEEE--CCEEc
Confidence 21 2344443 344577899999999987 7889999 77655
No 207
>3uzq_A Anti-dengue MAB 4E11; dengue antibody neutralization, immune system; HET: MES; 1.60A {Mus musculus} PDB: 3uze_A* 3uyp_A* 3uzv_B 1dzb_A
Probab=99.67 E-value=9.6e-16 Score=88.20 Aligned_cols=111 Identities=18% Similarity=0.256 Sum_probs=76.1
Q ss_pred CCccEEEEEEeccCC--CCeeEEeeC--CccC-------------------CC---------CCCCeEEEecCCCCCCeE
Q psy12725 1 MLALKFFTCKYEGNP--VKTISWMKD--GKPV-------------------PD---------HNEPVFRIDSVRKEDKGM 48 (119)
Q Consensus 1 ~g~~~~l~c~~~~~~--~~~v~w~~~--~~~~-------------------~~---------~~~~~l~~~~~~~~d~g~ 48 (119)
.|+.|+|.|.+.+.+ .+.+.|||. +..+ .. .....|.|.+++.+|+|.
T Consensus 15 ~G~~v~L~C~~~g~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~I~~v~~~DsG~ 94 (253)
T 3uzq_A 15 PGASVRLSCTASGFNIKDTYMSWVKQRPEQGLEWIGRIDPANGDTKYDPKFQGKATITADTSSNTAYLHLSSLTSGDTAV 94 (253)
T ss_dssp TTCCEEEEEEECSSCGGGSCEEEEEECTTCCEEEEEEEETTTTEEEECGGGTTTEEEEEETTTTEEEEEECSCCGGGCEE
T ss_pred CCCcEEEEEEeeCCcccCceEEEEEeCCCCCCEEEEEEccCCCcceeCCcCCCcEEEEeecCCCeEEEEeCCCCcccCEE
Confidence 489999999998753 678999982 1110 00 012349999999999999
Q ss_pred EEEEEEcCCCCc-eeEeeEEEeee------------cCCCeeeecCCccccCCCCcEEEEeEEccCCCC----eEEEEEC
Q psy12725 49 YQCVIRNEQESA-QASGELKLGGR------------FDPPVIKESFSDETLNPGPNYYFKCIASGNPTP----EISWYLD 111 (119)
Q Consensus 49 y~C~~~~~~~~~-~~~~~~~v~~~------------~~~~~~~~~~~~~~~~~g~~~~l~C~~~~~p~~----~~~W~~~ 111 (119)
|.|.+.+..... .....+.+... ..++.+...+....+.+|+.+.|.|.+.+.+.+ .+.|+++
T Consensus 95 Y~C~~~~~~~~~~~~~~~l~V~~~~~~~~~~~~~~~~~~~~v~~~p~~~~v~~G~~v~L~C~~~~~~~~~~~~~v~W~r~ 174 (253)
T 3uzq_A 95 YYCSRGWEGFAYWGQGTLVTVSAGGGGSGGGGSGGGGSELVMTQTPASLAVSLGQRATISCRASENVDRYGNSFMHWYQQ 174 (253)
T ss_dssp EEEEECSSSCCEECCCEEEEECSSSCCCCC---------CCEEEECSEEEECTTSCEEEEEEESSCCEETTEECEEEEEE
T ss_pred EEEEEeeCCccEECCCcEEEEecCCccccccccCCCcccceEECcCCeEEEeCCCCEEEEEEecCccccCCCcEEEEEEE
Confidence 999999854332 22334444320 124455555555678899999999999888776 8999984
No 208
>3m8o_H Immunoglobulin A1 heavy chain; immunoglobulin fold, immune system; 1.55A {Homo sapiens} PDB: 3qnx_B 3qny_B
Probab=99.67 E-value=5.4e-16 Score=87.62 Aligned_cols=114 Identities=19% Similarity=0.417 Sum_probs=75.7
Q ss_pred CCccEEEEEEeccCC--CCeeEEeeCCc--cC---------------------CC---------CCCCeEEEecCCCCCC
Q psy12725 1 MLALKFFTCKYEGNP--VKTISWMKDGK--PV---------------------PD---------HNEPVFRIDSVRKEDK 46 (119)
Q Consensus 1 ~g~~~~l~c~~~~~~--~~~v~w~~~~~--~~---------------------~~---------~~~~~l~~~~~~~~d~ 46 (119)
.|+.|+|.|.+.+.+ ...+.|||... .. .. ....+|.|.+++.+|+
T Consensus 14 ~G~~v~L~C~~~~~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~sL~I~~v~~~Ds 93 (221)
T 3m8o_H 14 PGGSLKLSCAASGFTLSGSNVHWVRQASGKGLEWVGRIKRNAESDATAYAASMRGRLTISRDDSKNTAFLQMNSLKSDDT 93 (221)
T ss_dssp TTCCEEEEEEEESSCGGGSEEEEEEECTTSCEEEEEEECCGGGTTCEEECGGGTTSEEEEEEGGGTEEEEEECSCCGGGC
T ss_pred CCCCEEEEEEcccccccccEEEEEEECCCCCcEEEEEEcccccCcccccCccccccEEEEecCCCCEEEEEECCCCHHHC
Confidence 489999999998643 57899997321 10 00 0112599999999999
Q ss_pred eEEEEEEEcCC--CCceeEeeEEEee-ecCCCeeeecCCccccCCCCcEEEEeEEcc-CCC-C-eEEEEECCEEc
Q psy12725 47 GMYQCVIRNEQ--ESAQASGELKLGG-RFDPPVIKESFSDETLNPGPNYYFKCIASG-NPT-P-EISWYLDGKKL 115 (119)
Q Consensus 47 g~y~C~~~~~~--~~~~~~~~~~v~~-~~~~~~~~~~~~~~~~~~g~~~~l~C~~~~-~p~-~-~~~W~~~~~~~ 115 (119)
|.|.|.+.+.. ........+.+.. ...+|.+........ .+|+.+.|.|.+.+ .|. + .+.|+++|..+
T Consensus 94 G~Y~C~~~~~~~~~~~~~~~~l~V~~~~~~~p~v~~~~~~~~-~~g~~v~L~C~~~~~~P~~~~~v~W~~~g~~~ 167 (221)
T 3m8o_H 94 AMYYCVIRGDVYNRQWGQGTLVTVSSASPTSPKVFPLSLCST-QPDGNVVIACLVQGFFPQEPLSVTWSESGQGV 167 (221)
T ss_dssp EEEEEEEESCTTCCCBBCCEEEEECSCCCBCCEEEEEECCSC-CCTTEEEEEEEEEEEBSSCSEEEEESCCSTTC
T ss_pred EEEEEEEECCChhheECCCEEEEEecCCCCCCeEEEecCccc-ccCCCEEEEEEEEeeECCCCEEEEEEECCEEC
Confidence 99999998863 1223334455532 123455542222222 78999999999987 565 4 89999988655
No 209
>1dn0_B IGM-kappa cold agglutinin (heavy chain); FAB, antibody, human, immune system; 2.28A {Homo sapiens} SCOP: b.1.1.1 b.1.1.2 PDB: 1qlr_B* 2j6e_H* 2agj_H* 2h32_H
Probab=99.67 E-value=1.4e-15 Score=86.71 Aligned_cols=116 Identities=17% Similarity=0.270 Sum_probs=72.7
Q ss_pred CCccEEEEEEeccCC--CCeeEEeeCC--ccCC----------------CC-----------CCCeEEEecCCCCCCeEE
Q psy12725 1 MLALKFFTCKYEGNP--VKTISWMKDG--KPVP----------------DH-----------NEPVFRIDSVRKEDKGMY 49 (119)
Q Consensus 1 ~g~~~~l~c~~~~~~--~~~v~w~~~~--~~~~----------------~~-----------~~~~l~~~~~~~~d~g~y 49 (119)
.|+.|+|.|.+.+.+ ...+.|||.. .... .. ....|.|.+++.+|+|.|
T Consensus 14 ~G~~v~L~C~~~~~~~~~~~v~W~r~~~~~~~~~l~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~~L~I~~v~~~D~G~Y 93 (232)
T 1dn0_B 14 PSETLSLTCAVYGGSFSDYYWSWIRQPPGKGLEWIGEINHSGSTNYNPSLKSRVTISVDTSKNQFSLKLSSVTAADTAVY 93 (232)
T ss_dssp TTSCEEEEEEEESSCCSSCCEEEEEECTTSCCEEEEEECTTCCEEECTTTTTTEEEEEETTTTEEEEEECSCCGGGCEEE
T ss_pred CCCcEEEEEEEccccCCCceEEEEEeCCCCCeEEEEEEecCCceeeCCccCCeEEEEEeCCCCEEEEEECCCCcccCEEE
Confidence 489999999998754 5689999842 1110 00 112799999999999999
Q ss_pred EEEEEcCC--CC----ceeEeeEEEee-ecCCCeeeecCCccccCCC-CcEEEEeEEccC-CCC-eEEEEE-CCEEcc
Q psy12725 50 QCVIRNEQ--ES----AQASGELKLGG-RFDPPVIKESFSDETLNPG-PNYYFKCIASGN-PTP-EISWYL-DGKKLV 116 (119)
Q Consensus 50 ~C~~~~~~--~~----~~~~~~~~v~~-~~~~~~~~~~~~~~~~~~g-~~~~l~C~~~~~-p~~-~~~W~~-~~~~~~ 116 (119)
.|.+.+.. +. ......+.|.. ...+|.+........+..| +.+.|.|.+.+. |.+ .+.|++ +|..+.
T Consensus 94 ~C~~~~~~~~~~~~~~~~~~~~L~V~~~~~~~P~v~~~~p~~~~~~g~~~v~L~C~~~g~~P~p~~v~W~~~~g~~l~ 171 (232)
T 1dn0_B 94 YCARPPHDTSGHYWNYWGQGTLVTVSSGSASAPTLFPLVSCENSPSDTSSVAVGCLAQDFLPDSITFSWKYKNNSDIS 171 (232)
T ss_dssp EEEECSSTTSCSCCSEECCCEEEEECSSCCBCCEEEEEECC------CCSEEEEEEEEEEBSSCCEEEEEETTSCEEC
T ss_pred EEEEecCCcCCchhhhcccceEEEEccCCCCCCceEEeccccccCCCCCcEEEEEEEEEEeCCCeEEEEEcCCCCcee
Confidence 99998421 11 11233444432 1123554432222234577 899999999876 766 899999 887653
No 210
>2oz4_A Intercellular adhesion molecule 1; IGSF domain, structural plasticity, cell-surface dimerizatio adhesion; HET: NAG FUC; 2.70A {Homo sapiens} SCOP: b.1.1.3 b.1.1.4 b.1.1.4 PDB: 1p53_A*
Probab=99.66 E-value=2.6e-16 Score=91.02 Aligned_cols=108 Identities=18% Similarity=0.228 Sum_probs=77.6
Q ss_pred CCccEEEEEEeccCCCCeeEEeeCCccCCCC-CCCeEEEecCCCCCCeEEEEEEEcCC-CCce-eEeeEEEeeecCCCee
Q psy12725 1 MLALKFFTCKYEGNPVKTISWMKDGKPVPDH-NEPVFRIDSVRKEDKGMYQCVIRNEQ-ESAQ-ASGELKLGGRFDPPVI 77 (119)
Q Consensus 1 ~g~~~~l~c~~~~~~~~~v~w~~~~~~~~~~-~~~~l~~~~~~~~d~g~y~C~~~~~~-~~~~-~~~~~~v~~~~~~~~~ 77 (119)
.|+.+.|.|.+. |.+.+.| ++..+... ....|.+..+...|.|.|.|.+.+.. +... ....+.+.+. .+|.+
T Consensus 112 ~G~~v~l~C~~~--p~~~i~W--~g~~~~~~~~~~~l~i~~~~~~~~g~Y~C~a~n~~~g~~~~~s~~~~l~V~-~~p~~ 186 (265)
T 2oz4_A 112 EGTEVTVKCEAH--PRAKVTL--NGVPAQPLGPRAQLLLKATPEDNGRSFSCSATLEVAGQLIHKNQTRELRVL-YGPRL 186 (265)
T ss_dssp TTCEEEEEEECC--TTSEEEE--SSCSSSCCSSEECCEEECCGGGTTEEEEEEEEEECSSSEEEEEEEEEEEEE-EEEEC
T ss_pred CCCcEEEEEEcc--CCCEEEE--CCEEccCCCCcEEEEEccccccCCceEEEEEEcCCCCCcccccccEEEEEE-eCCcc
Confidence 388999999998 8889999 77766432 34567788888899999999998543 4433 1233333332 23444
Q ss_pred eec--CCccccCCCCcEEEEeEEccCCCCeEEEEECCE
Q psy12725 78 KES--FSDETLNPGPNYYFKCIASGNPTPEISWYLDGK 113 (119)
Q Consensus 78 ~~~--~~~~~~~~g~~~~l~C~~~~~p~~~~~W~~~~~ 113 (119)
... +....+.+|+.+.|.|.+.|.|.|.+.|++++.
T Consensus 187 ~~~~~p~~~~v~~g~~~~l~C~~~g~P~p~i~W~~~~~ 224 (265)
T 2oz4_A 187 DERDCPGNWTWPENSQQTPMCQAWGNPLPELKCLKDGT 224 (265)
T ss_dssp CGGGSCSEEEEETTCEECCCCCCEEESCCEEEEEETTT
T ss_pred ccccCCCccEEcCCCeEEEEeECccCCCCeEEEEECCc
Confidence 332 234467889999999999999999999999986
No 211
>2aty_A Complement receptor chimeric conjugate CR2-IG; immunoglobulin fold, antibody, immune system; NMR {Homo sapiens}
Probab=99.66 E-value=2.4e-15 Score=91.15 Aligned_cols=116 Identities=13% Similarity=0.165 Sum_probs=80.2
Q ss_pred CCccEEEEEEeccC---CC-CeeEEeeCCccCCCC--------------CCCeEEEecCCCCCCeEEEEEEEcCCCCcee
Q psy12725 1 MLALKFFTCKYEGN---PV-KTISWMKDGKPVPDH--------------NEPVFRIDSVRKEDKGMYQCVIRNEQESAQA 62 (119)
Q Consensus 1 ~g~~~~l~c~~~~~---~~-~~v~w~~~~~~~~~~--------------~~~~l~~~~~~~~d~g~y~C~~~~~~~~~~~ 62 (119)
+|+.++|.|.+.+. |. ..|.|++++..+... ....|.|..++..|.|.|+|.+.+.......
T Consensus 182 ~g~~v~L~C~~~g~~P~p~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~s~L~I~~~~~~D~g~Y~C~~~~~~~~~~~ 261 (376)
T 2aty_A 182 ITLTPKVTCVVVDISKDDPEVQFSWFVDDVEVHTAQTQPREEQFNSTFRSVSELPIMHQDWLNGKEFKCRVNSAAFPAPI 261 (376)
T ss_pred eCCeeEEEEEEeccccCCCccEEEEEECCccccCcccCCCCcccCCcEEEEEEEEechHhccCCCEEEEEEecCCCCCce
Confidence 48899999999876 32 369999987554210 1135788888889999999999987543322
Q ss_pred EeeEEEe-eecCCCeeeecCCccccCCCCcEEEEeEEccCCC--CeEEEEECCEEcc
Q psy12725 63 SGELKLG-GRFDPPVIKESFSDETLNPGPNYYFKCIASGNPT--PEISWYLDGKKLV 116 (119)
Q Consensus 63 ~~~~~v~-~~~~~~~~~~~~~~~~~~~g~~~~l~C~~~~~p~--~~~~W~~~~~~~~ 116 (119)
...+.+. ....+|.+...+.......|+.+.|.|.+.+..+ ..+.|++||..+.
T Consensus 262 ~~~v~~~~~~~~~P~v~v~~~~~~~~~g~~~~L~C~~~g~~P~~i~v~W~k~g~~~~ 318 (376)
T 2aty_A 262 EKTISKTKGRPKAPQLYTIPPPKEQMAKDKVSLTCMITDFFPEDITVEWQWNGQPAE 318 (376)
T ss_pred EEEEcCCCCCCcCCeEEeeCCCHHHhcCCceEEEEEEEEeECCCcEEEEEECCEECC
Confidence 2222210 1124677776665544556889999999988633 4899999998764
No 212
>3bn9_D E2 FAB heavy chain; antibody-protease complex, protein-protein complex, enzyme- inhibitor complex, disease mutation, glycoprotein, hydrolase; 2.17A {Homo sapiens} SCOP: b.1.1.1 b.1.1.2 PDB: 3kr3_H 2xtj_E
Probab=99.66 E-value=2.2e-16 Score=91.31 Aligned_cols=114 Identities=17% Similarity=0.298 Sum_probs=69.2
Q ss_pred CCccEEEEEEeccCC--CCeeEEeeCC--ccC-------------------CC---------CCCCeEEEecCCCCCCeE
Q psy12725 1 MLALKFFTCKYEGNP--VKTISWMKDG--KPV-------------------PD---------HNEPVFRIDSVRKEDKGM 48 (119)
Q Consensus 1 ~g~~~~l~c~~~~~~--~~~v~w~~~~--~~~-------------------~~---------~~~~~l~~~~~~~~d~g~ 48 (119)
.|+.|+|.|.+.+.+ .+.+.|||.. ..+ .. .....|.|.+++.+|+|.
T Consensus 14 ~G~~v~L~C~~~~~~~~~~~v~W~r~~~g~~~~~l~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~sL~I~~v~~~DsG~ 93 (257)
T 3bn9_D 14 PGGSLRLSCAASGFTFSSYAMSWVRQAPGKGLEWVSAISGSGGSTYYADSVKGRFTISRDNSKNTLYLQMSSLRAEDTAV 93 (257)
T ss_dssp TTCEEEEEEEEESSCGGGCCEEEEEECTTSCEEEEEEECSSSCCEEECGGGTTTEEEEEETTTTEEEEEEESCCGGGCEE
T ss_pred CCCcEEEEEEeccccCCCceEEEEEECCCCCeEEEEEEecCCCceecCcccCCceEEEecCCCCEEEEEECCCChhhCEE
Confidence 489999999998764 5789999843 111 00 012479999999999999
Q ss_pred EEEEEEcCCC----------C---ceeEeeEEEee-ecCCCeeeecCCccccCCCCcEEEEeEEccC-CCC-eEEEEECC
Q psy12725 49 YQCVIRNEQE----------S---AQASGELKLGG-RFDPPVIKESFSDETLNPGPNYYFKCIASGN-PTP-EISWYLDG 112 (119)
Q Consensus 49 y~C~~~~~~~----------~---~~~~~~~~v~~-~~~~~~~~~~~~~~~~~~g~~~~l~C~~~~~-p~~-~~~W~~~~ 112 (119)
|.|.+.+..+ . ......+.|.. ...+|.+........+..|+.+.|.|.+.+. |.+ .+.|++++
T Consensus 94 Y~C~~~~~~g~~~~~~~~~~~~~~~~~~t~L~V~~~~~~~P~v~~~~p~~~~~~g~~v~L~C~~~g~~P~pi~v~W~k~g 173 (257)
T 3bn9_D 94 YYCARPYLTYPQRRGPQNVSPFDNWGQGTMVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGA 173 (257)
T ss_dssp EEEEEECCSSTTSCCCCTTCCEEEECCCEEEEECSSCCBCCEECCCCC-----------CCCEEEEEBSSCCEEEETTTT
T ss_pred EEEEEecCCCcccccccccceeeeeCCcEEEEecCCCCcCCcEEEecCcccccCCCcEEEEEEEeeEECCCcEEEEeeCC
Confidence 9999998643 1 11223444432 1124555433322335678999999999876 766 89999988
Q ss_pred EE
Q psy12725 113 KK 114 (119)
Q Consensus 113 ~~ 114 (119)
..
T Consensus 174 ~~ 175 (257)
T 3bn9_D 174 LT 175 (257)
T ss_dssp CC
T ss_pred Cc
Confidence 65
No 213
>2cqv_A MLCK, myosin light chain kinase, smooth muscle and non- muscle isozymes; IG fold, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.1.1.4
Probab=99.66 E-value=2.1e-15 Score=77.19 Aligned_cols=69 Identities=25% Similarity=0.261 Sum_probs=57.0
Q ss_pred CCccEEEEEEeccCCCCeeEEeeCCccCCCCC---------CCeEEEecCCCCCCeEEEEEEEcCCCCceeEeeEEEe
Q psy12725 1 MLALKFFTCKYEGNPVKTISWMKDGKPVPDHN---------EPVFRIDSVRKEDKGMYQCVIRNEQESAQASGELKLG 69 (119)
Q Consensus 1 ~g~~~~l~c~~~~~~~~~v~w~~~~~~~~~~~---------~~~l~~~~~~~~d~g~y~C~~~~~~~~~~~~~~~~v~ 69 (119)
.|+.+.|.|.+.+.|.+.+.|+|++..+.... ...|.|.+++.+|.|.|+|.+.|..+.......+.+.
T Consensus 21 ~G~~v~l~C~~~g~p~p~i~W~k~~~~~~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~N~~g~~~~~~~l~V~ 98 (114)
T 2cqv_A 21 AGESVELFGKVTGTQPITCTWMKFRKQIQESEHMKVENSENGSKLTILAARQEHCGCYTLLVENKLGSRQAQVNLTVV 98 (114)
T ss_dssp TTCCEEEEEEEESSSSCEEEEEESSSBCCCSSSEEEEECSSEEEEEETTCCTTTCEEEEEEEECSSCEEECCEEEEEE
T ss_pred CCCeEEEEEEEEcCCCCEEEEEECCEECcCCCCEEEEEcCCEEEEEECCCChhcCEEEEEEEEECCCcEEEEEEEEEE
Confidence 48999999999999999999999998775321 3579999999999999999999988766555556654
No 214
>1oga_E TRBC1, T-cell receptor beta chain C region; immune system/receptor, immune system/receptor/complex, TCR, MHC, immunodominance, FLU, complex; 1.40A {Homo sapiens} SCOP: b.1.1.1 b.1.1.2 PDB: 2vlm_E 2vlk_E 2vlj_E 2vlr_E 2xna_B 2xn9_B 2axh_A 2axj_A 3scm_D* 3sda_D* 3sdc_D* 3sdd_D* 3qi9_D* 3mff_B* 2ak4_E 3he7_D* 2eyr_B 3pqy_E 3kxf_E 2cde_B ...
Probab=99.65 E-value=2e-15 Score=86.95 Aligned_cols=116 Identities=16% Similarity=0.354 Sum_probs=77.8
Q ss_pred CCccEEEEEEeccCCCCeeEEeeCCc--cC-----------------CC--------CCCCeEEEecCCCCCCeEEEEEE
Q psy12725 1 MLALKFFTCKYEGNPVKTISWMKDGK--PV-----------------PD--------HNEPVFRIDSVRKEDKGMYQCVI 53 (119)
Q Consensus 1 ~g~~~~l~c~~~~~~~~~v~w~~~~~--~~-----------------~~--------~~~~~l~~~~~~~~d~g~y~C~~ 53 (119)
.|+.|.|.|.+. .+.+.+.|||... .. .. .....|.|.+++.+|+|.|.|.+
T Consensus 17 ~G~~v~L~C~~~-~~~~~v~W~r~~~~~~~~~l~~~~~~~~~~~~~~~~R~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~~ 95 (252)
T 1oga_E 17 EGQNVTLSCEQN-LNHDAMYWYRQDPGQGLRLIYYSQIVNDFQKGDIAEGYSVSREKKESFPLTVTSAQKNPTAFYLCAS 95 (252)
T ss_dssp TTCCEEECCEEC-SCCSEEEEEEECTTCCEEEEEEESSTTCCEECSSCTTEEECCSSTTBCCEEECSCCSCCCEEEEEEE
T ss_pred CCCcEEEEEEeC-CCCCEEEEEEECCCCCeEEEEEEccCccccCCccCCcEEEEecCCCEEEEEECcCChhhCEEEEEEE
Confidence 489999999985 3578999998431 00 00 12357999999999999999999
Q ss_pred EcCC---CCceeEeeEEEeee---cCCCeeeec-CCccccCCCCcEEEEeEEccC-CCC-eEEEEECCEEccc
Q psy12725 54 RNEQ---ESAQASGELKLGGR---FDPPVIKES-FSDETLNPGPNYYFKCIASGN-PTP-EISWYLDGKKLVN 117 (119)
Q Consensus 54 ~~~~---~~~~~~~~~~v~~~---~~~~~~~~~-~~~~~~~~g~~~~l~C~~~~~-p~~-~~~W~~~~~~~~~ 117 (119)
.+.. ........+.|... ..+|.+... +....+..|+.+.|.|.+.+. |.+ .+.|+++|..+..
T Consensus 96 ~~~~~~~~~~~~~~~l~V~~~~~~~~~P~v~~~~~~~~~~~~g~~~~L~C~~~g~~P~~~~v~W~~~g~~l~~ 168 (252)
T 1oga_E 96 SSRSSYEQYFGPGTRLTVTEDLKNVFPPEVAVFEPSEAEISHTQKATLVCLATGFYPDHVELSWWVNGKEVHS 168 (252)
T ss_dssp ESSTTSCCEECCCEEEEEESCGGGCBCCEEEEECCCHHHHHHHSEEEEEEEEEEEBSSCEEEEEEETTEEECS
T ss_pred ecCCccceeECCCEEEEEecccCCCCCCeEEEECCChhhhccCCceEEEEEEeeEcCCCcEEEEEECCEECCC
Confidence 9862 11122234444321 135655543 222234568999999999886 644 8999999987753
No 215
>3ejj_X Macrophage colony-stimulating factor 1 receptor; growth factor-receptor complex, receptor tyrosine kinase, CY 4-helix bundle, ATP-binding; HET: NAG; 2.40A {Mus musculus} PDB: 4exp_X*
Probab=99.65 E-value=2.1e-15 Score=87.89 Aligned_cols=109 Identities=13% Similarity=0.256 Sum_probs=77.4
Q ss_pred CCccEEEEEEeccCCCCeeEEeeCCccCC----CCCCCeEEEecCCCCCCeEEEEEEEcCCCCceeEeeEEEeeecCCCe
Q psy12725 1 MLALKFFTCKYEGNPVKTISWMKDGKPVP----DHNEPVFRIDSVRKEDKGMYQCVIRNEQESAQASGELKLGGRFDPPV 76 (119)
Q Consensus 1 ~g~~~~l~c~~~~~~~~~v~w~~~~~~~~----~~~~~~l~~~~~~~~d~g~y~C~~~~~~~~~~~~~~~~v~~~~~~~~ 76 (119)
.|+.+.|.|.+.+ .+.|++++.... ......|.|.+++..|.|.|.|.+.+..+.......+.+.. +|.
T Consensus 18 ~G~~v~L~C~~~~----~v~W~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~~~~~~~~~~~~~~l~V~~---~~~ 90 (289)
T 3ejj_X 18 PGETVTLRCVSNG----SVEWDGPISPYWTLDPESPGSTLTTRNATFKNTGTYRCTELEDPMAGSTTIHLYVKD---PAH 90 (289)
T ss_dssp TTCCEEEEEECSS----CCEEECSCSSSSEECCCSSCCEEEESSCCGGGCEEEEEECCC-----CEEEEEEECC---SSC
T ss_pred CCCCEEEEEEeCC----cEEEccCCCceEEEeccCCccEEEEeeeccccCEEEEEEEeccCCcceeEEEEEEeC---CCc
Confidence 4899999999976 499998765321 23567899999999999999999987765544455555532 332
Q ss_pred -eeecCCccccCCCCcEEEEeEEccCCCCe-EEEEE-CCEEcc
Q psy12725 77 -IKESFSDETLNPGPNYYFKCIASGNPTPE-ISWYL-DGKKLV 116 (119)
Q Consensus 77 -~~~~~~~~~~~~g~~~~l~C~~~~~p~~~-~~W~~-~~~~~~ 116 (119)
+...+....+.+|+.+.|.|.+.+.+.+. +.|++ ++..+.
T Consensus 91 ~~~~~~~~~~v~~g~~v~L~C~~~~~~~~~~v~W~~~~~~~~~ 133 (289)
T 3ejj_X 91 SWNLLAQEVTVVEGQEAVLPCLITDPALKDSVSLMREGGRQVL 133 (289)
T ss_dssp SEEESCSEEEEETTSCEEECEEESCGGGGGSEEEEEGGGEECC
T ss_pred ceecccceEEEecCCceEeEEEccCCCcceEEEEEecCCeecC
Confidence 44445556678999999999998876664 99985 666553
No 216
>1hxm_B Gamma-delta T-cell receptor; IG domain, TCR, GDTCR, immune system; 3.12A {Homo sapiens} SCOP: b.1.1.1 b.1.1.2
Probab=99.65 E-value=1.9e-15 Score=86.54 Aligned_cols=115 Identities=15% Similarity=0.258 Sum_probs=75.1
Q ss_pred CCccEEEEEEeccC--CCCeeEEeeCC--ccCC-----------------CC-----------CCCeEEEecCCCCCCeE
Q psy12725 1 MLALKFFTCKYEGN--PVKTISWMKDG--KPVP-----------------DH-----------NEPVFRIDSVRKEDKGM 48 (119)
Q Consensus 1 ~g~~~~l~c~~~~~--~~~~v~w~~~~--~~~~-----------------~~-----------~~~~l~~~~~~~~d~g~ 48 (119)
.|+.|+|.|.+.+. +...+.|||.. ..+. .. ....|.|.+++.+|+|.
T Consensus 15 ~G~~v~L~C~~~~~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~~L~I~~v~~~D~G~ 94 (242)
T 1hxm_B 15 LSKTARLECVVSGITISATSVYWYRERPGEVIQFLVSISYDGTVRKESGIPSGKFEVDRIPETSTSTLTIHNVEKQDIAT 94 (242)
T ss_dssp TTCCEEEEEEEESSCTTTSCEEEEEECTTSCCEEEEEECSSSCEEECTTCCTTSEEEEEETTTTEEEEEECSCCGGGCEE
T ss_pred CCCcEEEEEEeCCccccCceEEEEEeCCCCCcEEEEEEecCCceecCCcccCCeEEEEecCCCcEEEEEECCCCcccCEE
Confidence 48999999999875 56789999842 2110 00 12468999999999999
Q ss_pred EEEEEEcCCC-C------ceeEeeEEEeeec----CCCeeeec-CCccccCCCCcEEEEeEEccC-CC-CeEEEEECCE-
Q psy12725 49 YQCVIRNEQE-S------AQASGELKLGGRF----DPPVIKES-FSDETLNPGPNYYFKCIASGN-PT-PEISWYLDGK- 113 (119)
Q Consensus 49 y~C~~~~~~~-~------~~~~~~~~v~~~~----~~~~~~~~-~~~~~~~~g~~~~l~C~~~~~-p~-~~~~W~~~~~- 113 (119)
|.|.+.+... . ......+.|.... .+|.+... +....+..|+.+.|.|.+.+. |. +.+.|++++.
T Consensus 95 Y~C~~~~~~~~~~~~~~~~~~~~~L~V~~~~~~~~~~p~~~v~~p~~~~~~~g~~v~L~C~~~g~~P~~~~v~W~~~~~~ 174 (242)
T 1hxm_B 95 YYCALWEAQQELGKKIKVFGPGTKLIITDKQLDADVSPKPTIFLPSIAETKLQKAGTYLCLLEKFFPDVIKIHWEEKKSN 174 (242)
T ss_dssp EEEEEEEECSSTTCEEEEECCCEEEEEESSCCCSCCSCBCCCCCCCGGGGGSSSCEEEEEEEEEESSCCEEEEEEESSSC
T ss_pred EEEeeecCCccccccceeEcCcEEEEEcccccCCCcCCCceEECCChhhcccCCCceEEEEEeeEECCCeEEEEEcCCCE
Confidence 9999987531 1 1122344443210 02333322 233345679999999999876 54 5899999986
Q ss_pred Ec
Q psy12725 114 KL 115 (119)
Q Consensus 114 ~~ 115 (119)
.+
T Consensus 175 ~l 176 (242)
T 1hxm_B 175 TI 176 (242)
T ss_dssp CC
T ss_pred ee
Confidence 44
No 217
>2ens_A Advanced glycosylation END product-specific receptor; beta-sandwich, C2-SET, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.65 E-value=6.6e-16 Score=76.83 Aligned_cols=69 Identities=29% Similarity=0.578 Sum_probs=57.8
Q ss_pred CCccEEEEEEeccCCCCeeEEeeCCccCCCCCCCeEEEecCCCCCCeEEEEEEEcCCCCceeEeeEEEe
Q psy12725 1 MLALKFFTCKYEGNPVKTISWMKDGKPVPDHNEPVFRIDSVRKEDKGMYQCVIRNEQESAQASGELKLG 69 (119)
Q Consensus 1 ~g~~~~l~c~~~~~~~~~v~w~~~~~~~~~~~~~~l~~~~~~~~d~g~y~C~~~~~~~~~~~~~~~~v~ 69 (119)
.|+.+.|.|.+.+.|.+.+.|+|++..+.......|.|.+++..|.|.|.|.+.|..+....+..+.+.
T Consensus 24 ~G~~v~l~C~~~g~p~~~v~W~k~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~n~~~~~~~s~~~~v~ 92 (96)
T 2ens_A 24 PGGTVTLTCEVPAQPSPQIHWMKDGVPLPLPPSPVLILPEIGPQDQGTYSCVATHSSHGPQESRAVSIS 92 (96)
T ss_dssp TTCEEEEECCCSSCSSCCCCCEESSSBCSSCCCSEEEEESCCTTTCEEEECEECCSSCCCEECCCEEEE
T ss_pred CCCeEEEEEEEccCCCCEEEEEECCEECcCCCCCEEEECCCCcccCEEEEEEEEeCCCCcEEEEEEEEE
Confidence 489999999999988889999999998877778899999999999999999999965444444444443
No 218
>3bfo_A Mucosa-associated lymphoid tissue lymphoma translocation protein 1 (isoform 2); hydrolase, immunoglobulin domain, nucleus, protease; 1.15A {Homo sapiens}
Probab=99.65 E-value=2.4e-15 Score=74.12 Aligned_cols=59 Identities=22% Similarity=0.522 Sum_probs=53.9
Q ss_pred CCccEEEEEEeccCCCCeeEEeeCCccCCCCCCCeEEEecCCCCCCeEEEEEEEcCCCC
Q psy12725 1 MLALKFFTCKYEGNPVKTISWMKDGKPVPDHNEPVFRIDSVRKEDKGMYQCVIRNEQES 59 (119)
Q Consensus 1 ~g~~~~l~c~~~~~~~~~v~w~~~~~~~~~~~~~~l~~~~~~~~d~g~y~C~~~~~~~~ 59 (119)
.|+.+.|.|.+.+.|.+.+.|++++..+.......|.|.+++..|.|.|.|.+.|..+.
T Consensus 17 ~G~~~~l~C~~~g~p~p~i~W~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~n~~g~ 75 (91)
T 3bfo_A 17 PGSTLVLQCVAVGSPIPHYQWFKNELPLTHETKKLYMVPYVDLEHQGTYWCHVYNDRDS 75 (91)
T ss_dssp TTSCEEEECEEECSSCCEEEEEETTEECTTCCSSEEEESSCCGGGCEEEEEEEECSSCE
T ss_pred CCCcEEEEEEeccCCCCEEEEEcCCeeCCcCCCCeEEECCCCHHhCEEEEEEEEcCCCC
Confidence 48999999999999999999999999887777789999999999999999999998763
No 219
>2dm2_A Palladin; beta-sandwich, KIAA0992, actin-associated scaffold, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.64 E-value=3e-15 Score=76.17 Aligned_cols=70 Identities=27% Similarity=0.476 Sum_probs=57.5
Q ss_pred CCccEEEEEEeccCCCCeeEEeeCCccCCCCC---------C--CeEEEecCCCCCCeEEEEEEEcCCCCceeEeeEEEe
Q psy12725 1 MLALKFFTCKYEGNPVKTISWMKDGKPVPDHN---------E--PVFRIDSVRKEDKGMYQCVIRNEQESAQASGELKLG 69 (119)
Q Consensus 1 ~g~~~~l~c~~~~~~~~~v~w~~~~~~~~~~~---------~--~~l~~~~~~~~d~g~y~C~~~~~~~~~~~~~~~~v~ 69 (119)
.|+.+.|.|.+.+.|.+.+.|++++..+.... . ..|.|..++..|.|.|.|.+.|..+.......+.|.
T Consensus 22 ~G~~v~l~C~~~g~p~p~v~W~k~g~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~a~N~~g~~~~~~~l~V~ 101 (110)
T 2dm2_A 22 EGMPVTFTCRVAGNPKPKIYWFKDGKQISPKSDHYTIQRDLDGTCSLHTTASTLDDDGNYTIMAANPQGRISCTGRLMVQ 101 (110)
T ss_dssp TTCCEEEEEEBCCSSCCEEEEECSSCBCCTTCSSEEEEECTTCEEEEEESSCCTTTCSCCEEEEECTTCCEEECCCEEEE
T ss_pred CCCeEEEEEEEEecCCCEEEEEECCEECCCCCCeEEEEECCCcEEEEEECCCChhhCEEEEEEEEECCCeEEEEEEEEEE
Confidence 48899999999999999999999988775421 1 268999999999999999999998877666666665
Q ss_pred e
Q psy12725 70 G 70 (119)
Q Consensus 70 ~ 70 (119)
.
T Consensus 102 ~ 102 (110)
T 2dm2_A 102 A 102 (110)
T ss_dssp C
T ss_pred C
Confidence 3
No 220
>1igy_B IGG1 intact antibody MAB61.1.3; intact immunoglobulin, V region, C region, hinge region, immunoglobulin; HET: NAG FUL NDG BMA MAN GAL FUC; 3.20A {Mus musculus} SCOP: b.1.1.1 b.1.1.2 b.1.1.2 b.1.1.2
Probab=99.64 E-value=2.3e-17 Score=101.26 Aligned_cols=115 Identities=14% Similarity=0.194 Sum_probs=79.8
Q ss_pred CCccEEEEEEeccCC----CCeeEEeeCCccCCCC--------------CCCeEEEecCCCCCCeEEEEEEEcCCCCcee
Q psy12725 1 MLALKFFTCKYEGNP----VKTISWMKDGKPVPDH--------------NEPVFRIDSVRKEDKGMYQCVIRNEQESAQA 62 (119)
Q Consensus 1 ~g~~~~l~c~~~~~~----~~~v~w~~~~~~~~~~--------------~~~~l~~~~~~~~d~g~y~C~~~~~~~~~~~ 62 (119)
.|+.+.|.|.+.+.+ .+.|.|++++..+... ....|.|..+...|.|.|.|.+.|..+....
T Consensus 244 ~G~~~~L~C~~~g~~p~P~~~~i~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~n~~~~~~~ 323 (434)
T 1igy_B 244 ITVTPKVTCVVVDISKDDPEVQFSWFVDNVEVHTAQTQPREEQFNSTFRVVSALPIMHQDWLNGKEFKCRVNSAAFPAPI 323 (434)
T ss_dssp TTSCCEEEEEECCCCSSCCCCCBCBBSSSCCBCCCSCCCCCCCCSSSCCCCCCEECCHHHHHHTCCCBCCBCCSSCSSCC
T ss_pred cCCCcEEEEEEeccccCCCCeEEEEEeCCcccCCcccCcceeCCCCcEEEEEEEEECHHHccCCCcEEEEEECCCCCCce
Confidence 489999999999873 3589999988665321 1246888888889999999999988664422
Q ss_pred EeeEEE--eeecCCCeeeecCCccccCCCCcEEEEeEEccC-CCC-eEEEEECCEEcc
Q psy12725 63 SGELKL--GGRFDPPVIKESFSDETLNPGPNYYFKCIASGN-PTP-EISWYLDGKKLV 116 (119)
Q Consensus 63 ~~~~~v--~~~~~~~~~~~~~~~~~~~~g~~~~l~C~~~~~-p~~-~~~W~~~~~~~~ 116 (119)
...+.+ .. ..+|.+...+.......|+.+.|.|.+.+. |++ .+.|+++|..+.
T Consensus 324 ~~~v~~~~~~-~~~P~v~~~~~~~~~~~~~~~~L~C~~~g~~P~~~~v~W~k~g~~l~ 380 (434)
T 1igy_B 324 EKTISKTKGK-PRAPQVYTIPPPKEQMAKDKVSLTCMITDFFPEDITVEWQSDGQAPE 380 (434)
T ss_dssp CCCCCCCCSC-CBCCCCEEECCCSSSSSSSEEEEEEEEEEEBCSCEEEEEEETTSCCS
T ss_pred eEEEeccCCC-CcCCEEEEECCCHHHhcCCcEEEEEEEEeeECCCeEEEEEECCEecC
Confidence 222222 11 235666554443334457789999999885 433 899999998764
No 221
>3liz_H 4C3 monoclonal antibody heavy chain; hydrolase-immune system complex; HET: NAG BMA MAN; 1.80A {Mus musculus} PDB: 3rvv_D* 3rvu_D 3rvt_D* 3rvw_D* 3rvx_D 1lo4_H 1ub6_H 3r06_B 3r08_H
Probab=99.64 E-value=9e-16 Score=88.44 Aligned_cols=113 Identities=17% Similarity=0.314 Sum_probs=72.3
Q ss_pred CCccEEEEEEeccC--CCCeeEEeeCCc--c---C---C-----------C-----------CCCCeEEEecCCCCCCeE
Q psy12725 1 MLALKFFTCKYEGN--PVKTISWMKDGK--P---V---P-----------D-----------HNEPVFRIDSVRKEDKGM 48 (119)
Q Consensus 1 ~g~~~~l~c~~~~~--~~~~v~w~~~~~--~---~---~-----------~-----------~~~~~l~~~~~~~~d~g~ 48 (119)
.|+.|+|.|.+.+. +...+.|||... . + . . ....+|.|.+++.+|+|.
T Consensus 14 ~G~~v~L~C~~~~~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~sL~I~~v~~~DsG~ 93 (253)
T 3liz_H 14 PGGSLKLSCAASGFTFSSFAMSWGRQTPDKRLELVATINSNGASTYYPDTVKGRFTISRDNAKNTLFLQMSSLKSEDTAM 93 (253)
T ss_dssp TTCCEEEEEEEESSCGGGSCEEEEEECTTSCEEEEEEECTTSSCEECCTTTTTTCEEEEEGGGTEEEEEECSCCGGGCEE
T ss_pred CCCcEEEEEEeeCccccCceEEEEEECCCCCcEEEEEEecCCCccccCcccCCcEEEEEeCCCCEEEEEECCCChhhCEE
Confidence 48999999999763 356899998321 1 0 0 0 011349999999999999
Q ss_pred EEEEEEcCC----CCceeEeeEEEe-eecCCCeeeecCCccccCCCCcEEEEeEEcc-CCCC-eEEEEECCE
Q psy12725 49 YQCVIRNEQ----ESAQASGELKLG-GRFDPPVIKESFSDETLNPGPNYYFKCIASG-NPTP-EISWYLDGK 113 (119)
Q Consensus 49 y~C~~~~~~----~~~~~~~~~~v~-~~~~~~~~~~~~~~~~~~~g~~~~l~C~~~~-~p~~-~~~W~~~~~ 113 (119)
|.|.+.+.. ........+.+. ....+|.+........+..|+.+.|.|.+.+ .|.+ .+.|++++.
T Consensus 94 Y~C~~~~~~~~~~~~~~~~~~l~V~~~~~~~P~i~~~~~~~~~~~g~~v~L~C~~~g~~P~~~~v~W~~~~~ 165 (253)
T 3liz_H 94 YYCTRDPAGRAWFAYWGQGTLVTVSAAKTTPPSVYPLAPGSAAQTNSMVTLGCLVKGYFPEPVTVTWNSGSL 165 (253)
T ss_dssp EEEEECCBTTTBCCEECCCEEEEECSSCCBCCEEEEECC------CCEEEEEEEEEEEBSSCCEEEEGGGTB
T ss_pred EEEEEecCCcceeeEECCCEEEEEeccCCCCCeEEEecCCcccCCCCcEEEEEEEeeEeCCCeEEEEEeCCe
Confidence 999998752 112223345543 1123555554444445667999999999987 5666 899999886
No 222
>1hzh_H IGG, immunoglobulin heavy chain; antibody, immune system; HET: NAG BMA MAN GAL FUC; 2.70A {Homo sapiens} SCOP: b.1.1.1 b.1.1.2 b.1.1.2 b.1.1.2 PDB: 2ig2_H 1mco_H*
Probab=99.64 E-value=2.2e-15 Score=93.12 Aligned_cols=114 Identities=17% Similarity=0.286 Sum_probs=78.3
Q ss_pred CCccEEEEEEeccCC--CCeeEEeeC--CccC-------------------CC---------CCCCeEEEecCCCCCCeE
Q psy12725 1 MLALKFFTCKYEGNP--VKTISWMKD--GKPV-------------------PD---------HNEPVFRIDSVRKEDKGM 48 (119)
Q Consensus 1 ~g~~~~l~c~~~~~~--~~~v~w~~~--~~~~-------------------~~---------~~~~~l~~~~~~~~d~g~ 48 (119)
.|+.+.|.|.+.+.+ .+.+.|||. +... .. .....|.|.+++.+|+|.
T Consensus 14 ~G~~v~L~C~~~~~~~~~~~v~W~k~~~g~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~~L~I~~v~~~D~G~ 93 (457)
T 1hzh_H 14 PGASVKVSCQASGYRFSNFVIHWVRQAPGQRFEWMGWINPYNGNKEFSAKFQDRVTFTADTSANTAYMELRSLRSADTAV 93 (457)
T ss_dssp TTCCEEECEEEESSCGGGSCEEEEEECTTSCCEEEEEEETTTTEEEECTTTTTTEEEEEETTTTEEEEEECSCCGGGCEE
T ss_pred CCCCEEEEEEecCccccCcEEEEEEeCCCCCcEEEEEEecCCCceecCccccCceEEEEeCCCCEEEEEECCCCcccCEE
Confidence 489999999998765 678999984 2110 00 011369999999999999
Q ss_pred EEEEEEcCCC------------CceeEeeEEEeee-cCCCeeeecCCccccCCCCcEEEEeEEccC-CC-CeEEEEECCE
Q psy12725 49 YQCVIRNEQE------------SAQASGELKLGGR-FDPPVIKESFSDETLNPGPNYYFKCIASGN-PT-PEISWYLDGK 113 (119)
Q Consensus 49 y~C~~~~~~~------------~~~~~~~~~v~~~-~~~~~~~~~~~~~~~~~g~~~~l~C~~~~~-p~-~~~~W~~~~~ 113 (119)
|.|.+.+..+ .......+.+... ..+|.+...+....+.+|+.+.|.|.+.+. |. +.+.|++++.
T Consensus 94 Y~C~~~~~~~~~~~~~~~~~~~~~~~~~~l~V~~~~~~~P~i~~~~~~~~~~~g~~v~L~C~~~g~~P~~~~v~W~k~~~ 173 (457)
T 1hzh_H 94 YYCARVGPYSWDDSPQDNYYMDVWGKGTTVIVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGAL 173 (457)
T ss_dssp EEEEECCCCCSSCCTTTTCSCCBCCCCEEEEECSCCCBCCEEEEECCCSCCCTTCCEEEEEEEESBBSCCCEEEETTTTB
T ss_pred EEEEEecCCccccccccccccceECCcEEEEecCCCCCCCeEEecCccccccCCCcEEEEEEEeEEeCCCeEEEEEeCCE
Confidence 9999988753 1222334444321 124555444434456789999999999877 64 6899999985
Q ss_pred E
Q psy12725 114 K 114 (119)
Q Consensus 114 ~ 114 (119)
.
T Consensus 174 ~ 174 (457)
T 1hzh_H 174 T 174 (457)
T ss_dssp C
T ss_pred e
Confidence 4
No 223
>3mjg_X Beta-type platelet-derived growth factor receptor; protein-protein complex, growth factor-receptor complex, TRA hormone complex; HET: NDG NAG; 2.30A {Homo sapiens}
Probab=99.64 E-value=5.4e-16 Score=90.53 Aligned_cols=107 Identities=13% Similarity=0.201 Sum_probs=73.5
Q ss_pred CCccEEEEEEeccCCCCeeEEeeCC--ccCCCC--CCCeEEEecCCCCCCeEEEEEEEcCCCCcee-EeeEEEeeecCCC
Q psy12725 1 MLALKFFTCKYEGNPVKTISWMKDG--KPVPDH--NEPVFRIDSVRKEDKGMYQCVIRNEQESAQA-SGELKLGGRFDPP 75 (119)
Q Consensus 1 ~g~~~~l~c~~~~~~~~~v~w~~~~--~~~~~~--~~~~l~~~~~~~~d~g~y~C~~~~~~~~~~~-~~~~~v~~~~~~~ 75 (119)
.|+.+.|.|.+. .|.+.+.|++++ ..+... ....+. ...|.|.|.|.+.+..+.... ...+.+... .+|
T Consensus 109 ~G~~v~l~C~~~-~p~~~v~w~~~~~~~~~~~~~~~~~~~~----~~~d~G~Y~C~a~n~~~~~~s~~~~l~v~~~-~~p 182 (289)
T 3mjg_X 109 EITEITIPCRVT-DPQLVVTLHEKKGDVALPVPYDHQRGFS----GIFEDRSYICKTTIGDREVDSDAYYVYRLQV-SSI 182 (289)
T ss_dssp SCCCEEECCCBS-CTTSCEEEEESSCCSCCCCCEETTTEEE----ECCCSSEEEEEEEETTEEEECCCEEEEECCC-CCC
T ss_pred cCCeEEEEeEcC-CCCceEEEEeCCCCCccceeecCCcCee----eeccCcEEEEEEEeCCceeeeeeEEEEecCC-CCC
Confidence 388999999998 577889998864 333211 112222 357899999999876433221 223333321 456
Q ss_pred eeeecCCccccCCCCcEEEEeEEccCCCCeEEEEECCE
Q psy12725 76 VIKESFSDETLNPGPNYYFKCIASGNPTPEISWYLDGK 113 (119)
Q Consensus 76 ~~~~~~~~~~~~~g~~~~l~C~~~~~p~~~~~W~~~~~ 113 (119)
.+...+....+.+|+.+.|.|.+.+.|.+.+.|++++.
T Consensus 183 ~i~~~~~~~~v~~G~~v~L~C~~~g~p~p~v~W~~~~~ 220 (289)
T 3mjg_X 183 NVSVNAVQTVVRQGENITLMCIVIGNEVVNFEWTYPRK 220 (289)
T ss_dssp CCEEEESCSEEETTSCEEEEEEEESCSSBEEEEECTTS
T ss_pred CcEEeCCcceeEcCCCEEEEEEECCCCCcceEEEcCCc
Confidence 66665555668899999999999999999999997654
No 224
>2dav_A SLOW MYBP-C, myosin-binding protein C, SLOW-type; IG domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.1.1.4
Probab=99.63 E-value=1.8e-15 Score=78.52 Aligned_cols=79 Identities=19% Similarity=0.224 Sum_probs=58.8
Q ss_pred CCccEEEEEEeccC---CCCeeEEeeCC---------ccCCCC---------CCCeEEEecCCCCCCeEEEEEEEcCCCC
Q psy12725 1 MLALKFFTCKYEGN---PVKTISWMKDG---------KPVPDH---------NEPVFRIDSVRKEDKGMYQCVIRNEQES 59 (119)
Q Consensus 1 ~g~~~~l~c~~~~~---~~~~v~w~~~~---------~~~~~~---------~~~~l~~~~~~~~d~g~y~C~~~~~~~~ 59 (119)
.|+.++|.|.+.+. |.|.|.|||+. ..+... ....|.|.++...|.|.|.|++.+..+.
T Consensus 21 eG~~v~L~C~v~g~~~~p~P~V~W~Kgk~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~I~~v~~~DaG~Y~Cevsn~~g~ 100 (126)
T 2dav_A 21 VGEDITFIAKVKAEDLLRKPTIKWFKGKWMDLASKAGKHLQLKETFERHSRVYTFEMQIIKAKDNFAGNYRCEVTYKDKF 100 (126)
T ss_dssp TTCCEEEEEEEECCCSSSCCEEEEEESSSCCHHHHTTSSEEEEEEEETTTTEEEEEEEECSCCTTSCEEEEEEEECSSCE
T ss_pred CCCCEEEEEEEeccCCCCCCcEEEeeCcCcccCCCCCceEEEccccccccccceEEEEEccCCcccCEEEEEEEEeCCCc
Confidence 38999999999764 78999999974 111110 1367999999999999999999999877
Q ss_pred ceeEeeEEEee-ecCCCeeee
Q psy12725 60 AQASGELKLGG-RFDPPVIKE 79 (119)
Q Consensus 60 ~~~~~~~~v~~-~~~~~~~~~ 79 (119)
......+.|.+ ....|.+.+
T Consensus 101 ~~~~~~L~V~~~~~~~p~~~i 121 (126)
T 2dav_A 101 DSCSFDLEVHESTGTTPNIDS 121 (126)
T ss_dssp EEECCEEEEECCCCSCCCCCC
T ss_pred EEEEEEEEEEecCCCCCeEEe
Confidence 77777777765 323444443
No 225
>2gjj_A A21 single-chain antibody fragment against ERBB2; IG family, SCFV, immune system; 2.10A {Mus musculus} PDB: 3h3b_C
Probab=99.63 E-value=5e-15 Score=85.85 Aligned_cols=111 Identities=18% Similarity=0.252 Sum_probs=73.4
Q ss_pred CCccEEEEEEeccCC------CCeeEEeeCC--ccCC------------CC---------CCCeEEEecCCCCCCeEEEE
Q psy12725 1 MLALKFFTCKYEGNP------VKTISWMKDG--KPVP------------DH---------NEPVFRIDSVRKEDKGMYQC 51 (119)
Q Consensus 1 ~g~~~~l~c~~~~~~------~~~v~w~~~~--~~~~------------~~---------~~~~l~~~~~~~~d~g~y~C 51 (119)
.|+.|+|.|.+.+.+ .+.+.|||.. ..+. .. ....|.|.+++.+|.|.|.|
T Consensus 19 ~G~~v~L~C~~~~~~~~~~~~~~~v~W~k~~~g~~~~~l~~~~~~~~~~~~~R~~~~~~~~~~~L~I~~v~~~DsG~Y~C 98 (264)
T 2gjj_A 19 VGEKVTMTCKSSQTLLYSNNQKNYLAWYQQKPGQSPKLLISWAFTRKSGVPDRFTGSGSGTDFTLTIGSVKAEDLAVYYC 98 (264)
T ss_dssp TTCCEEEEEEESSCCEETTTTEECEEEEEECTTSCCEEEEETTTEECTTSCTTEEEEEETTEEEEEESSCCGGGCEEEEE
T ss_pred CCCcEEEEeEcCCcccccccCCceEEEEEECCCCCcEEEEEecccCCCCCCccEEEecCCCEEEEEECCCCHHHCEEEEE
Confidence 489999999998776 5789999842 2110 00 12379999999999999999
Q ss_pred EEEcCCCC-ceeEeeEEEeeecC---------------CCeee-ecCCccccCCCCcEEEEeEEccCCC--CeEEEEEC
Q psy12725 52 VIRNEQES-AQASGELKLGGRFD---------------PPVIK-ESFSDETLNPGPNYYFKCIASGNPT--PEISWYLD 111 (119)
Q Consensus 52 ~~~~~~~~-~~~~~~~~v~~~~~---------------~~~~~-~~~~~~~~~~g~~~~l~C~~~~~p~--~~~~W~~~ 111 (119)
.+.+.... ......+.|..... ++.+. ..+....+.+|+.+.|.|.+.+.+. +.+.|+++
T Consensus 99 ~~~~~~~~~~~~~~~L~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~G~~v~L~C~~~~~~~~~~~v~W~r~ 177 (264)
T 2gjj_A 99 QQYSNYPWTFGGGTRLEIKRGGGGSGGGGSGGGGSGGGGSEVQLQQSGPEVVKTGASVKISCKASGYSFTGYFINWVKK 177 (264)
T ss_dssp EECSSSSCEECCCEEEEEECC-------------------CCEEEECCCEEECTTCCEEEEEEEESSCGGGSEEEEEEE
T ss_pred EEecCCccEecCCEEEEEEcCCcccccccccccccccccCcEEEeCCCCEEEcCCCcEEEEEEEeCCccCCeEEEEEEE
Confidence 99876432 11223444432100 11221 1222335789999999999987764 68999986
No 226
>1wit_A Twitchin 18TH IGSF module; immunoglobulin superfamily, I SET, muscle protein; NMR {Caenorhabditis elegans} SCOP: b.1.1.4 PDB: 1wiu_A
Probab=99.63 E-value=1.1e-15 Score=75.58 Aligned_cols=68 Identities=18% Similarity=0.271 Sum_probs=54.9
Q ss_pred CCccEEEEEEeccCCCCeeEEeeCC--ccCCCC-------CCCeEEEecCCCCCCeEEEEEEEcCCCCceeEeeEEE
Q psy12725 1 MLALKFFTCKYEGNPVKTISWMKDG--KPVPDH-------NEPVFRIDSVRKEDKGMYQCVIRNEQESAQASGELKL 68 (119)
Q Consensus 1 ~g~~~~l~c~~~~~~~~~v~w~~~~--~~~~~~-------~~~~l~~~~~~~~d~g~y~C~~~~~~~~~~~~~~~~v 68 (119)
.|+.+.|.|.+.|.|.|.+.|++++ ..+... ....|.|.++..+|.|.|.|.+.|..+.......+.|
T Consensus 16 ~G~~~~l~C~~~g~P~p~i~W~k~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~D~G~Y~C~a~N~~G~~~~~~~l~V 92 (93)
T 1wit_A 16 AGFTHNLEVDFIGAPDPTATWTVGDSGAALAPELLVDAKSSTTSIFFPSAKRADSGNYKLKVKNELGEDEAIFEVIV 92 (93)
T ss_dssp TTBCCEEEEEEECCSSCEEEEECSTTTCBCSTTSEEEEETTEEEEECTTBCGGGCEEEEEEEEETTEEEEEEEEEEE
T ss_pred CCCEEEEEEEEEEcCCCEEEEEECCCCcccCCcEEEEecCCEEEEEECCCChhcCEEEEEEEEcCCCeEEEEEEEEE
Confidence 4889999999999999999999999 766432 2256889999999999999999998875555554443
No 227
>1g1c_A Immunoglobulin-like domain I1 from titin; immunoglobulin domain, beta-sandwhich, I-SET, structural protein; 2.10A {Homo sapiens} SCOP: b.1.1.4
Probab=99.63 E-value=3.3e-15 Score=74.56 Aligned_cols=68 Identities=18% Similarity=0.192 Sum_probs=55.6
Q ss_pred CCccEEEEEEeccCCCCeeEEeeCCccCCCCC----------CCeEEEecCCCCCCeEEEEEEEcCCCCceeEeeEEE
Q psy12725 1 MLALKFFTCKYEGNPVKTISWMKDGKPVPDHN----------EPVFRIDSVRKEDKGMYQCVIRNEQESAQASGELKL 68 (119)
Q Consensus 1 ~g~~~~l~c~~~~~~~~~v~w~~~~~~~~~~~----------~~~l~~~~~~~~d~g~y~C~~~~~~~~~~~~~~~~v 68 (119)
.|+.+.|.|.+.+.|.+.+.|++++..+.... ...|.|.+++.+|.|.|.|.+.|..+.......+.|
T Consensus 19 ~G~~v~l~C~~~g~p~p~v~W~k~g~~~~~~~~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~a~N~~g~~~~~~~l~V 96 (99)
T 1g1c_A 19 QGSDAHFRVRVVGKPDPECEWYKNGVKIERSDRIYWYWPEDNVCELVIRDVTGEDSASIMVKAINIAGETSSHAFLLV 96 (99)
T ss_dssp TTSCEEEEEEEEEESCCEEEEEETTEECCCCSSEEEEEEETTEEEEEECSCCGGGCEEEEEEEEETTEEEEEEEEEEE
T ss_pred CCCcEEEEEEEEEeCCCEEEEEECCEECCCCCCEEEEEcCCCEEEEEECCCCcCCCEEEEEEEEECCCcEEEEEEEEE
Confidence 48999999999999999999999998775432 236899999999999999999998766655555554
No 228
>2gki_A Nuclease; anti-DNA antibody, catalytic antibody, immune system; 2.88A {Mus musculus}
Probab=99.63 E-value=4.4e-15 Score=87.16 Aligned_cols=111 Identities=19% Similarity=0.321 Sum_probs=74.1
Q ss_pred CCccEEEEEEeccCC--CCeeEEeeCC--ccC-------------------CCC---------CCCeEEEecCCCCCCeE
Q psy12725 1 MLALKFFTCKYEGNP--VKTISWMKDG--KPV-------------------PDH---------NEPVFRIDSVRKEDKGM 48 (119)
Q Consensus 1 ~g~~~~l~c~~~~~~--~~~v~w~~~~--~~~-------------------~~~---------~~~~l~~~~~~~~d~g~ 48 (119)
.|+.|+|.|.+.+.+ .+.+.|||.. ..+ ... ....|.|.+++.+|+|.
T Consensus 36 ~G~~v~L~C~~~~~~~~~~~v~W~r~~~~~~~~~l~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~sL~I~~v~~~DsG~ 115 (291)
T 2gki_A 36 PGASVKMSCKASGYTFTSYVMHWVKQKPGQGLEWIGYINPYNDGTKYNEKFKGKATLTSDKSSSTAYMELSSLTSEDSAV 115 (291)
T ss_dssp TTCCEEEEEEEESSCGGGSCEEEEEECTTSCCEEEEEEETTTTEEEECGGGBTTBCEEEEGGGTEEEEEECSCCGGGCEE
T ss_pred CCCCEEEEEeccCCcccccEEEEEEECCCCCcEEEEEEecCCCccccCcccCCCEEEEEeCCCCEEEEEECcCCHHHCEE
Confidence 489999999998765 5789999853 111 000 12369999999999999
Q ss_pred EEEEEEcCC-CCc----eeEeeEEEeee-------------cCCCeeeecCCccccCCCCcEEEEeEEccCCCC------
Q psy12725 49 YQCVIRNEQ-ESA----QASGELKLGGR-------------FDPPVIKESFSDETLNPGPNYYFKCIASGNPTP------ 104 (119)
Q Consensus 49 y~C~~~~~~-~~~----~~~~~~~v~~~-------------~~~~~~~~~~~~~~~~~g~~~~l~C~~~~~p~~------ 104 (119)
|.|.+.+.. +.. .....+.|... ..++.+...+....+.+|+.+.|.|.+.+.+.+
T Consensus 116 Y~C~~~~~~~g~~~~~~~~~~~L~V~~~~~~~~~~~~~~~~~~~~~v~~~p~~~~v~~G~~v~L~C~~~~~~~~~~~~~~ 195 (291)
T 2gki_A 116 YYCARGAYKRGYAMDYWGQGTSVTVSSRGGGGSGGGGSGGGGSDLVMSQSPSSLAVSAGEKVTMSCKSSQSLFNSRTRKN 195 (291)
T ss_dssp EEEEEECGGGTTCEEEECCCEEEEECC----------------CCCEECSCSEEEEETTSCEEEEEEESSCCEETTTTEE
T ss_pred EEEEEeccccccccceeCCCcEEEEecCCccccccccCCCCCccceEEcCCCEEEEcCCCcEEEEEEcCCccccccccce
Confidence 999999863 111 11223444320 012333333444567899999999999888765
Q ss_pred eEEEEEC
Q psy12725 105 EISWYLD 111 (119)
Q Consensus 105 ~~~W~~~ 111 (119)
.+.|+++
T Consensus 196 ~v~W~k~ 202 (291)
T 2gki_A 196 YLAWYQQ 202 (291)
T ss_dssp CEEEEEE
T ss_pred eEEEEEE
Confidence 8999985
No 229
>2xot_A Amphoterin-induced protein 1; cell adhesion, neuronal protein, neurite growth regulation; HET: NAG BMA; 2.00A {Mus musculus}
Probab=99.62 E-value=2.4e-15 Score=90.71 Aligned_cols=92 Identities=18% Similarity=0.180 Sum_probs=54.9
Q ss_pred CCccEEEEEEeccCCCCeeEEeeCCccCCCC---------CCCeEEEecCCCCCCeEEEEEEEcCCCCceeEeeEEEeee
Q psy12725 1 MLALKFFTCKYEGNPVKTISWMKDGKPVPDH---------NEPVFRIDSVRKEDKGMYQCVIRNEQESAQASGELKLGGR 71 (119)
Q Consensus 1 ~g~~~~l~c~~~~~~~~~v~w~~~~~~~~~~---------~~~~l~~~~~~~~d~g~y~C~~~~~~~~~~~~~~~~v~~~ 71 (119)
.|+.+.|.|.+.+ |.+.+.|++++..+... ....|.|.+++.+|+|.|+|.+.|..+.....+.+.|..
T Consensus 260 ~G~~~~l~C~~~g-p~p~i~W~~~~~~~~~~~~~~~r~~~~~~~L~I~~v~~~D~G~Y~C~a~N~~g~~~~~~~l~V~~- 337 (361)
T 2xot_A 260 LGDTLTIRCDTKQ-QGMTKVWVSPSNEQVLSQGSNGSVSVRNGDLFFKKVQVEDGGVYTCYAMGETFNETLSVELKVYN- 337 (361)
T ss_dssp TTCCEEECCCCSS-TTCEEEEECTTSCBCCSCCSSSSEEEETTEEEESSCCTTSCEEEEEEEECSSCEEEEEEEEEEES-
T ss_pred CCCeEEEEeEeeC-CCCeEEEEeCCCeeEeecccCCceEeecCeEEEeecCcccCEEEEEEEecCCCccEEEEEEEEEe-
Confidence 4899999999998 88999999976543221 135799999999999999999999976555555555421
Q ss_pred cCCCeeeecCCccccCCCCcEEEEeEEccCCCCeEE
Q psy12725 72 FDPPVIKESFSDETLNPGPNYYFKCIASGNPTPEIS 107 (119)
Q Consensus 72 ~~~~~~~~~~~~~~~~~g~~~~l~C~~~~~p~~~~~ 107 (119)
. ...|..+.+.|.+.|.|.|.+.
T Consensus 338 --~-----------~~~g~~~~l~C~~~g~P~P~i~ 360 (361)
T 2xot_A 338 --F-----------TLHGHHDTLNAAADPWSHPQFE 360 (361)
T ss_dssp --S-----------CCC-------------------
T ss_pred --e-----------eccCCceEEEEEeCCCCCCccc
Confidence 1 1567789999999999988764
No 230
>2edj_A Roundabout homolog 2; KIAA1568 protein, beta sandwich, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.62 E-value=7.1e-15 Score=73.51 Aligned_cols=69 Identities=28% Similarity=0.594 Sum_probs=57.4
Q ss_pred CCccEEEEEEeccCCCCeeEEeeCCccCCC-------CCCCeEEEecCCCCCCeEEEEEEEcCCCCceeEeeEEEe
Q psy12725 1 MLALKFFTCKYEGNPVKTISWMKDGKPVPD-------HNEPVFRIDSVRKEDKGMYQCVIRNEQESAQASGELKLG 69 (119)
Q Consensus 1 ~g~~~~l~c~~~~~~~~~v~w~~~~~~~~~-------~~~~~l~~~~~~~~d~g~y~C~~~~~~~~~~~~~~~~v~ 69 (119)
.|+.+.|.|.+.+.|.+.+.|++++..+.. .....|.|.+++..|.|.|.|.+.|..+.......+.|.
T Consensus 22 ~G~~~~l~C~~~g~p~p~v~W~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~n~~g~~~~~~~l~V~ 97 (100)
T 2edj_A 22 VDGTALLKCKATGDPLPVISWLKEGFTFPGRDPRATIQEQGTLQIKNLRISDTGTYTCVATSSSGETSWSAVLDVT 97 (100)
T ss_dssp SSSEEEECCEEECSSCCEEEEEESSSEESSSCSSCEECTTCCEEEESCCTTTCCEEEEEEECSSCCCBCCEEEEEE
T ss_pred CCCcEEEEEEEEEcCCCEEEEEECCEECCCCCCCEEEcCCCEEEEccCCcccCEEEEEEEEcCCCCEEEEEEEEEe
Confidence 488999999999999999999999877652 234679999999999999999999988776666666653
No 231
>3kvq_A Vascular endothelial growth factor receptor 2; vegfr2, angiogenesis, ATP-binding, developmental protein, differentiation, glycoprotein; 2.70A {Homo sapiens} SCOP: b.1.1.0
Probab=99.62 E-value=2.4e-15 Score=76.22 Aligned_cols=70 Identities=27% Similarity=0.489 Sum_probs=51.7
Q ss_pred CCccEEEEEEeccCCCCeeEEeeCCccCCCC-------CCCeEEEecCCCCCCeEEEEEEEcCCCCceeEeeEEEee
Q psy12725 1 MLALKFFTCKYEGNPVKTISWMKDGKPVPDH-------NEPVFRIDSVRKEDKGMYQCVIRNEQESAQASGELKLGG 70 (119)
Q Consensus 1 ~g~~~~l~c~~~~~~~~~v~w~~~~~~~~~~-------~~~~l~~~~~~~~d~g~y~C~~~~~~~~~~~~~~~~v~~ 70 (119)
.|+.+.|.|.+.+.|.+.+.|++++..+... ....|.|.+++.+|.|.|.|.+.|..+.......+.+..
T Consensus 24 ~G~~v~l~C~~~g~p~p~i~W~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~a~n~~g~~~~~~~l~V~~ 100 (108)
T 3kvq_A 24 IGESIEVSCTASGNPPPQIMWFKDNETLVEDSGIVLKDGNRNLTIRRVRKEDEGLYTCQACSVLGCAKVEAFFIIEG 100 (108)
T ss_dssp TTCCEEEECBCC----CCEEEEESSSBCCCBTTEEEETTTTEEEECSCCGGGCEEEEEEEC----CEEEEEEEEEEC
T ss_pred CCCeEEEEEECcCcCCCeEEEEECCeEcccCCCeEEeCCCcEEEEeecCcccCEEEEEEEEeCCCceEEEEEEEEeC
Confidence 4899999999999898999999998876432 357899999999999999999999887776666666653
No 232
>1igy_B IGG1 intact antibody MAB61.1.3; intact immunoglobulin, V region, C region, hinge region, immunoglobulin; HET: NAG FUL NDG BMA MAN GAL FUC; 3.20A {Mus musculus} SCOP: b.1.1.1 b.1.1.2 b.1.1.2 b.1.1.2
Probab=99.62 E-value=3.4e-16 Score=96.14 Aligned_cols=114 Identities=20% Similarity=0.384 Sum_probs=78.2
Q ss_pred CCccEEEEEEeccCC--CCeeEEeeCC--ccC-------------------CC---------CCCCeEEEecCCCCCCeE
Q psy12725 1 MLALKFFTCKYEGNP--VKTISWMKDG--KPV-------------------PD---------HNEPVFRIDSVRKEDKGM 48 (119)
Q Consensus 1 ~g~~~~l~c~~~~~~--~~~v~w~~~~--~~~-------------------~~---------~~~~~l~~~~~~~~d~g~ 48 (119)
.|+.+.|.|.+.+.+ .+.+.|||+. ..+ .. .....|.|.+++.+|+|.
T Consensus 13 ~G~~v~L~C~~~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~~L~I~~v~~~D~G~ 92 (434)
T 1igy_B 13 PGASVKMSCKASGYTFTTYTIHWIKQRPGQGLEWIGYINPSSVYTNYNQRFKDKATLTRDRSSNTANIHLSSLTSDDSAV 92 (434)
T ss_dssp TBCCEEECCEECSSCGGGCCCEEEEECTTCCEEEEEECCSSSCCCCCCGGGTTTEECCBCGGGCBBCEEECSBCGGGCSE
T ss_pred CCCCEEEEEEccCCcccCceEEEEEECCCCCCEEEEEEccCCCceecCccccccEEEEEECCCCEEEEEECCCChHHCEE
Confidence 489999999998763 6789999863 211 00 012379999999999999
Q ss_pred EEEEEEcCCCCceeEeeEEEeee-cCCCeeeecCCccccCCCCcEEEEeEEccC-CCC-eEEEEECCEE
Q psy12725 49 YQCVIRNEQESAQASGELKLGGR-FDPPVIKESFSDETLNPGPNYYFKCIASGN-PTP-EISWYLDGKK 114 (119)
Q Consensus 49 y~C~~~~~~~~~~~~~~~~v~~~-~~~~~~~~~~~~~~~~~g~~~~l~C~~~~~-p~~-~~~W~~~~~~ 114 (119)
|.|.+.+..........+.+... ..+|.+........+.+|+.+.|.|.+.+. |.+ .+.|++++..
T Consensus 93 Y~C~~~~~~~~~~~~~~l~V~~~~~~~P~i~~~~~~~~~~~G~~v~L~C~~~g~~P~p~~v~W~k~~~~ 161 (434)
T 1igy_B 93 YYCVREGEVPYWGQGTTVTVSSAKTTPPSVYPLAPGSAAQTNSMVTLGCLVKGYFPEPVTVTWNSGSLS 161 (434)
T ss_dssp ECCCCSSSSCCCCCCEECEECCSCCBCCCEEEECCCCCCCCTTEEEEEEEEEEEBSSCCEEEETTTTBC
T ss_pred EEEEEEccccccCCceEEEEccCCCCCCeEEEcCCccccCCCCcEEEEEEEeeecCCCeEEEEeeCCcC
Confidence 99999885433333444554321 123444433333346789999999999886 666 8999998864
No 233
>1za6_B IGG heavy chain; immunoglobulin fold, CH2-domain-deletion, immune system; 2.80A {Homo sapiens} SCOP: b.1.1.1 b.1.1.2 b.1.1.2
Probab=99.62 E-value=1.2e-15 Score=91.21 Aligned_cols=115 Identities=15% Similarity=0.266 Sum_probs=75.0
Q ss_pred CCccEEEEEEeccC-CC-CeeEEeeCCccCCC-------CC-C-----CeEEEecCCCCCCeEEEEEEEcCCCCceeEee
Q psy12725 1 MLALKFFTCKYEGN-PV-KTISWMKDGKPVPD-------HN-E-----PVFRIDSVRKEDKGMYQCVIRNEQESAQASGE 65 (119)
Q Consensus 1 ~g~~~~l~c~~~~~-~~-~~v~w~~~~~~~~~-------~~-~-----~~l~~~~~~~~d~g~y~C~~~~~~~~~~~~~~ 65 (119)
.|+.+.|.|.+.+. |. +.+.|++++..+.. .. . ..|.|..+..+| |.|+|.+.|..+.......
T Consensus 134 ~g~~v~L~C~~~g~~P~~~~v~W~k~g~~~~~~~~~~~~~~~~~~~~~s~L~i~~~~~~d-G~Y~C~a~n~~~~~~~~~~ 212 (344)
T 1za6_B 134 SGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGT-QTYICNVNHKPSNTKVDKK 212 (344)
T ss_dssp SSSEEEEEEEEEEEBSSCCCEEETTTTBCTTEEECCCEECTTSCEEEEEEEEEETTHHHH-BCEEEEEEEGGGTEEEEEE
T ss_pred CCCcEEEEEEEeeEECCCeEEEEecCCccCceeECCCeECCCCCEEEEEEEEEcHHHcCC-CcEEEEEEeCCCCccceEe
Confidence 37899999999886 54 69999999875311 11 1 257777777777 9999999987654322222
Q ss_pred EEE---------------------eeecCCCeeeecCCccccCCCCcEEEEeEEccC-C-CCeEEEEECCEEcc
Q psy12725 66 LKL---------------------GGRFDPPVIKESFSDETLNPGPNYYFKCIASGN-P-TPEISWYLDGKKLV 116 (119)
Q Consensus 66 ~~v---------------------~~~~~~~~~~~~~~~~~~~~g~~~~l~C~~~~~-p-~~~~~W~~~~~~~~ 116 (119)
+.+ .....+|.+...+.......|..+.|.|.+.|. | .+.+.|+++|..+.
T Consensus 213 ~~~~v~~~~~~~~~~~~~~~l~~~~~~~~~P~v~~~~~~~~~~~~~~~~L~C~~~g~~P~~~~v~W~k~g~~~~ 286 (344)
T 1za6_B 213 VEPKSCDKTHTCPPCGGGSSGGGSGGQPREPQVYTLPPSRDELTKNQVSLTCLVKGFYPSDIAVEWESNGQPEN 286 (344)
T ss_dssp ECCCCC--------------------CCBCCEEEEECCCGGGGGSSSEEEEEEEEEEBSSCCEEEEESSSSCCC
T ss_pred ecccccccccccCCCCCCccccccCCCCcCCEEEEeCCChHhccCCcEEEEEEEeeEECCCeEEEEEECCeECC
Confidence 210 011235665544333223346669999999885 3 34899999998764
No 234
>1igt_B IGG2A intact antibody - MAB231; intact immunoglobulin V region C region, immunoglobulin; HET: NAG FUL BMA MAN GAL FUC; 2.80A {Mus musculus} SCOP: b.1.1.1 b.1.1.2 b.1.1.2 b.1.1.2
Probab=99.62 E-value=2.7e-15 Score=92.37 Aligned_cols=115 Identities=12% Similarity=0.198 Sum_probs=78.1
Q ss_pred CCccEEEEEEeccC-CCC-eeEEeeCCccCCC---C----C-----CCeEEEecCCCCCCeEEEEEEEcCCCCceeEeeE
Q psy12725 1 MLALKFFTCKYEGN-PVK-TISWMKDGKPVPD---H----N-----EPVFRIDSVRKEDKGMYQCVIRNEQESAQASGEL 66 (119)
Q Consensus 1 ~g~~~~l~c~~~~~-~~~-~v~w~~~~~~~~~---~----~-----~~~l~~~~~~~~d~g~y~C~~~~~~~~~~~~~~~ 66 (119)
.|+.+.|.|.+.+. |.+ .+.|++++..+.. . . ...|.|..+...| |.|.|.+.|..+.......+
T Consensus 137 ~g~~v~L~C~~~g~~P~p~~v~W~~~~~~~~~~~~~~~~~~~~~~~~s~L~i~~~~~~d-g~Y~C~a~n~~~~~~~~~~i 215 (444)
T 1igt_B 137 TGSSVTLGCLVKGYFPEPVTLTWNSGSLSSGVHTFPAVLQSDLYTLSSSVTVTSSTWPS-QSITCNVAHPASSTKVDKKI 215 (444)
T ss_dssp CSSCEEEEEEEEEEBSSCCEEEEGGGTBCTTEEECCCEEETTEEEEEEEEEECSTTTTT-SCCEEEEEETTTTEEEEEEC
T ss_pred CCCcEEEEEEEcceeCCCcEEEEecCCCCCCeEecCccccCCcEEEEEEEEEchhhcCC-CeEEEEEEeCCCCcceEEEe
Confidence 37899999999875 666 9999998765311 0 0 1347777888888 99999999987654333332
Q ss_pred EEe---------------eecCCCeeeecCCccc--cCCCCcEEEEeEEccCC----CCeEEEEECCEEcc
Q psy12725 67 KLG---------------GRFDPPVIKESFSDET--LNPGPNYYFKCIASGNP----TPEISWYLDGKKLV 116 (119)
Q Consensus 67 ~v~---------------~~~~~~~~~~~~~~~~--~~~g~~~~l~C~~~~~p----~~~~~W~~~~~~~~ 116 (119)
.+. ....+|.+...+.... +..|+.+.|.|.+.+.+ .+.+.|++++..+.
T Consensus 216 ~~~~~~~~~~~~~~~~~~~~~~~p~v~~~~p~~~~~~~~G~~~~L~C~~~g~~~~p~~~~v~W~k~~~~~~ 286 (444)
T 1igt_B 216 EPRGPTIKPCPPCKCPAPNLLGGPSVFIFPPKIKDVLMISLSPIVTCVVVDVSEDDPDVQISWFVNNVEVH 286 (444)
T ss_dssp CCCCCSCCCCCCCSCCCSCCCCCCEEEEECCCHHHHHCTTSCCEEEEEEEEECTTCCCCEEEEEETTEECS
T ss_pred ccCCCCcccCCccccCCcccCCCceEEecCCchhheeecCCCcEEEEEEeecccCCCCeEEEEEECCcccc
Confidence 210 0012455433333222 58899999999998874 35899999998764
No 235
>2yr3_A Myosin light chain kinase, smooth muscle; IG domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.62 E-value=4.2e-15 Score=74.22 Aligned_cols=68 Identities=24% Similarity=0.473 Sum_probs=55.7
Q ss_pred CCccEEEEEEeccCCCCeeEEeeCCccCCCCC------CCeEEEecCCCCCCeEEEEEEEcCCCCceeEeeEEE
Q psy12725 1 MLALKFFTCKYEGNPVKTISWMKDGKPVPDHN------EPVFRIDSVRKEDKGMYQCVIRNEQESAQASGELKL 68 (119)
Q Consensus 1 ~g~~~~l~c~~~~~~~~~v~w~~~~~~~~~~~------~~~l~~~~~~~~d~g~y~C~~~~~~~~~~~~~~~~v 68 (119)
.|+.+.|.|.+.+.|.+.+.|++++..+.... ...|.|.+++.+|.|.|.|.+.|..+.......+.|
T Consensus 25 ~G~~v~l~C~~~g~p~p~v~W~~~g~~~~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~a~N~~g~~~~~~~l~V 98 (99)
T 2yr3_A 25 EGQDFVLQCSVRGTPVPRITWLLNGQPIQYARSTCEAGVAELHIQDALPEDHGTYTCLAENALGQVSCSAWVTV 98 (99)
T ss_dssp TTCCEEEECEEEEESCCCCEEEESSSBCSSCCCEEETTEEEEEECSCCTTCCBCEEEEEECSSCEEEEECCEEE
T ss_pred CCCeEEEEEEEeeeCCCeEEEEECCEECcccceEeeCCeEEEEECCCChhhCEEEEEEEEECCCeEEEEEEEEE
Confidence 48899999999999999999999998775432 247999999999999999999998876555555443
No 236
>1u2h_A APEG-1, aortic preferentially expressed protein 1; structural genomics, IG-fold I-SET, RGD motif, homophilic adhesion, arterial smooth muscle cells; 0.96A {Homo sapiens}
Probab=99.62 E-value=4.5e-15 Score=74.06 Aligned_cols=68 Identities=24% Similarity=0.464 Sum_probs=55.2
Q ss_pred CCccEEEEEEeccCCCCeeEEeeCCccCCCCCC----------CeEEEecCCCCCCeEEEEEEEcCCCCceeEeeEEE
Q psy12725 1 MLALKFFTCKYEGNPVKTISWMKDGKPVPDHNE----------PVFRIDSVRKEDKGMYQCVIRNEQESAQASGELKL 68 (119)
Q Consensus 1 ~g~~~~l~c~~~~~~~~~v~w~~~~~~~~~~~~----------~~l~~~~~~~~d~g~y~C~~~~~~~~~~~~~~~~v 68 (119)
.|+.+.|.|.+.+.|.+.+.|++++..+..... ..|.|.+++.+|.|.|.|.+.|..+.......+.|
T Consensus 19 ~G~~v~l~C~~~g~p~p~v~W~k~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~D~G~Y~C~a~N~~g~~~~~~~l~V 96 (99)
T 1u2h_A 19 EGQDVIMSIRVQGEPKPVVSWLRNRQPVRPDQRRFAEEAEGGLCRLRILAAERGDAGFYTCKAVNEYGARQCEARLEV 96 (99)
T ss_dssp TTCCEEEEEEEEEESCCEEEEEETTEECCCBTTEEEEECGGGEEEEEESSCCGGGCEEEEEEEEETTEEEEEEEEEEE
T ss_pred CCCEEEEEEEEEEcCCCEEEEEECCEECCCCCCEEEEECCCCEEEEEEccCCcCCCEEEEEEEEECCCceeEEEEEEE
Confidence 488999999999999999999999987754211 26999999999999999999998766555555554
No 237
>1hzh_H IGG, immunoglobulin heavy chain; antibody, immune system; HET: NAG BMA MAN GAL FUC; 2.70A {Homo sapiens} SCOP: b.1.1.1 b.1.1.2 b.1.1.2 b.1.1.2 PDB: 2ig2_H 1mco_H*
Probab=99.61 E-value=3.7e-15 Score=92.09 Aligned_cols=115 Identities=17% Similarity=0.324 Sum_probs=74.2
Q ss_pred CCccEEEEEEeccCCCC----eeEEeeCCccCCCC--------CCCeEEEe---cCCCCC---CeEEEEEEEcCCCCcee
Q psy12725 1 MLALKFFTCKYEGNPVK----TISWMKDGKPVPDH--------NEPVFRID---SVRKED---KGMYQCVIRNEQESAQA 62 (119)
Q Consensus 1 ~g~~~~l~c~~~~~~~~----~v~w~~~~~~~~~~--------~~~~l~~~---~~~~~d---~g~y~C~~~~~~~~~~~ 62 (119)
.|+.+.|.|.+.+.+.+ .+.|++++..+... ....+.+. .+...| .|.|.|.+.+.......
T Consensus 263 ~G~~v~L~C~~~g~~p~p~~~~i~W~k~~~~~~~~~~~~~~~~~~g~~~~~~~l~i~~~d~~d~G~Y~C~a~n~~~~~~~ 342 (457)
T 1hzh_H 263 ISRTPEVTCVVVDVSHEDPEVKFNWYVDGVEVHNAKTKPREEQYNSTYRVVSVLTVLHQDWLNGKEYKCKVSNKALPAPI 342 (457)
T ss_dssp TTSCCCEEEEEECCCTTCCCCEEEEEETTEEECCCEEEEEEECTTSCEEEEEEECCCHHHHHHTCCEEEEEECTTSSSCE
T ss_pred cCCceEEEEEEEcccCCCCceEEEEEeCCccccccccccceecCCCcEEEEEEEEECHHHccCCCcEEEEEeCCCCCCcc
Confidence 38899999999987543 89999999765321 22233332 234555 89999999976544322
Q ss_pred EeeEEEe-eecCCCeeeecCCcc-ccCCCCcEEEEeEEccCCCC--eEEEEECCEEcc
Q psy12725 63 SGELKLG-GRFDPPVIKESFSDE-TLNPGPNYYFKCIASGNPTP--EISWYLDGKKLV 116 (119)
Q Consensus 63 ~~~~~v~-~~~~~~~~~~~~~~~-~~~~g~~~~l~C~~~~~p~~--~~~W~~~~~~~~ 116 (119)
...+.+. ....+|.+...+... .+..|+ +.|.|.+.+.+++ .+.|+++|..+.
T Consensus 343 ~~~v~~~~~~~~~P~v~~~~~~~~~~~~~~-~~l~C~~~g~~p~~~~v~W~k~g~~l~ 399 (457)
T 1hzh_H 343 EKTISKAKGQPREPQVYTLPPSRDELTKNQ-VSLTCLVKGFYPSDIAVEWESNGQPEN 399 (457)
T ss_dssp EEEECCCCCCCBCCEEEEECCCGGGGGSSE-EEEEEEEEEEBSSCCEEEEEETTEECC
T ss_pred eEEEEcccCCCCCCeEEEECCCccccCCCc-EEEEEEEEeEECCCCEEEEEECCEECc
Confidence 2222220 112456666544332 344555 9999999886444 899999999875
No 238
>2kdg_A Myotilin; immonoglobulin domain, actin-binding, structural protein, cell membrane, cytoplasm, cytoskeleton, disease mutation, immunoglobulin domain; NMR {Homo sapiens}
Probab=99.61 E-value=5.2e-15 Score=73.95 Aligned_cols=68 Identities=25% Similarity=0.450 Sum_probs=55.4
Q ss_pred CCccEEEEEEeccCCCCeeEEeeCCccCCCCC--------C--CeEEEecCCCCCCeEEEEEEEcCCCCceeEeeEEE
Q psy12725 1 MLALKFFTCKYEGNPVKTISWMKDGKPVPDHN--------E--PVFRIDSVRKEDKGMYQCVIRNEQESAQASGELKL 68 (119)
Q Consensus 1 ~g~~~~l~c~~~~~~~~~v~w~~~~~~~~~~~--------~--~~l~~~~~~~~d~g~y~C~~~~~~~~~~~~~~~~v 68 (119)
.|+.+.|.|.+.+.|.+.+.|++++..+.... . ..|.|..++..|.|.|.|.+.|..+.......+.|
T Consensus 19 ~G~~~~l~C~~~g~p~p~v~W~~~g~~~~~~~~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~a~n~~g~~~~~~~l~V 96 (100)
T 2kdg_A 19 EGRFCRMDFKVSGLPAPDVSWYLNGRTVQSDDLHKMIVSEKGLHSLIFEVVRASDAGAYACVAKNRAGEATFTVQLDV 96 (100)
T ss_dssp TTCCEEEEEECEEESCCEEEEEETTEEECCCSSSCEEEETTTEEEEEESSCCGGGCEEEEEEEEETTEEEEEEEEEEE
T ss_pred CCCEEEEEEEEEeeCCCEEEEEECCEECcCCCcEEEEEcCCCeEEEEECCCCcccCEEEEEEEEcCCCeEEEEEEEEE
Confidence 48899999999998999999999987765432 1 37999999999999999999998776555555554
No 239
>3qp3_A Titin; I-SET IG-like, sarcomere, M-BAND, transferase; 2.00A {Homo sapiens}
Probab=99.61 E-value=6.7e-15 Score=73.95 Aligned_cols=69 Identities=17% Similarity=0.316 Sum_probs=56.5
Q ss_pred CCccEEEEEEeccCCCCeeEEeeCCccCCCCC---------CCeEEEecCCCCCCeEEEEEEEcCCCCceeEeeEEEe
Q psy12725 1 MLALKFFTCKYEGNPVKTISWMKDGKPVPDHN---------EPVFRIDSVRKEDKGMYQCVIRNEQESAQASGELKLG 69 (119)
Q Consensus 1 ~g~~~~l~c~~~~~~~~~v~w~~~~~~~~~~~---------~~~l~~~~~~~~d~g~y~C~~~~~~~~~~~~~~~~v~ 69 (119)
.|+.+.|.|.+.+.|.+.+.|++++..+.... ...|.|.+++.+|.|.|.|.+.|..+.......+.|.
T Consensus 22 ~G~~v~l~C~~~g~p~p~i~W~k~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~D~G~Y~C~a~N~~G~~~~~~~l~V~ 99 (103)
T 3qp3_A 22 CGQNTRFILNVQSKPTAEVKWYHNGVELQESSKIHYTNTSGVLTLEILDCHTDDSGTYRAVCTNYKGEASDYATLDVT 99 (103)
T ss_dssp TTCCEEEEEEEEEESCCEEEEEETTEECCCCSSEEEEEETTEEEEEECSCCGGGCEEEEEEEEETTEEEEEEEEEEEE
T ss_pred CCCeEEEEEEEEecCCCEEEEEECCEECCCCCCEEEEECCCEEEEEEcCCCcccCEEEEEEEEeCCCcEEEEEEEEEE
Confidence 48899999999999999999999998775432 2368999999999999999999987766555555553
No 240
>3mjg_X Beta-type platelet-derived growth factor receptor; protein-protein complex, growth factor-receptor complex, TRA hormone complex; HET: NDG NAG; 2.30A {Homo sapiens}
Probab=99.61 E-value=3.4e-15 Score=87.14 Aligned_cols=107 Identities=12% Similarity=0.208 Sum_probs=70.9
Q ss_pred CCccEEEEEEeccCCCCeeEEeeCCccCCC-----CC---CCeEEEecCCCCCCeEEEEEEEcCCCC-ceeEeeEEEeee
Q psy12725 1 MLALKFFTCKYEGNPVKTISWMKDGKPVPD-----HN---EPVFRIDSVRKEDKGMYQCVIRNEQES-AQASGELKLGGR 71 (119)
Q Consensus 1 ~g~~~~l~c~~~~~~~~~v~w~~~~~~~~~-----~~---~~~l~~~~~~~~d~g~y~C~~~~~~~~-~~~~~~~~v~~~ 71 (119)
.|+.+.|.|.+.+. +.|++++..+.. .. ...|.|..++..|.|.|.|.+.+..+. ......+.+.+.
T Consensus 14 ~G~~v~L~C~~~~~----v~W~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~D~G~Y~C~a~n~~g~~~~~~~~~~v~v~ 89 (289)
T 3mjg_X 14 VSSTFVLTCSGSAP----VVWERMSQEPPQEMAKAQDGTFSSVLTLTNLTGLDTGEYFCTHNDSRGLETDERKRLYIFVP 89 (289)
T ss_dssp TTCCEEEEEEESSC----CEEEBTTBCCSEEEEECTTSCEEEEEEECSCCGGGCEEEEEECCC------CCCEEEEEECC
T ss_pred CCCcEEEEEeccce----EEEECCCCCcccceeccCCCceeEEEEEccCChhhCEEEEEEEcccCCCCcCcEEeEEEEEE
Confidence 48999999999863 999999877521 11 257999999999999999999987643 222333444332
Q ss_pred c-CCCeeeecCCc--cccCCCCcEEEEeEEccCCCCeEEEEECC
Q psy12725 72 F-DPPVIKESFSD--ETLNPGPNYYFKCIASGNPTPEISWYLDG 112 (119)
Q Consensus 72 ~-~~~~~~~~~~~--~~~~~g~~~~l~C~~~~~p~~~~~W~~~~ 112 (119)
. ..+.+...+.. ..+.+|+.+.|.|.+. .|.+.+.|++++
T Consensus 90 ~p~~~~~~~~~~~~~~~v~~G~~v~l~C~~~-~p~~~v~w~~~~ 132 (289)
T 3mjg_X 90 DPTVGFLPNDAEELFIFLTEITEITIPCRVT-DPQLVVTLHEKK 132 (289)
T ss_dssp CTTCCBCCCCHHHHEEEESSCCCEEECCCBS-CTTSCEEEEESS
T ss_pred CCCcCcccCCCCcceEEeecCCeEEEEeEcC-CCCceEEEEeCC
Confidence 1 11221111111 3478999999999987 677788888753
No 241
>1x9q_A SCFV, 4M5.3 anti-fluorescein single chain antibody fragment; VERY high affinity, antibody binding, electrostatics, directed evolution; HET: FLU; 1.50A {Homo sapiens}
Probab=99.61 E-value=8.7e-15 Score=84.92 Aligned_cols=111 Identities=17% Similarity=0.319 Sum_probs=71.3
Q ss_pred CCccEEEEEEeccCC-----CCeeEEeeCC--ccC--------------CC-------CCCCeEEEecCCCCCCeEEEEE
Q psy12725 1 MLALKFFTCKYEGNP-----VKTISWMKDG--KPV--------------PD-------HNEPVFRIDSVRKEDKGMYQCV 52 (119)
Q Consensus 1 ~g~~~~l~c~~~~~~-----~~~v~w~~~~--~~~--------------~~-------~~~~~l~~~~~~~~d~g~y~C~ 52 (119)
.|+.|+|.|.+.+.+ .+.+.|||.. ..+ .. .....|.|.+++.+|+|.|.|.
T Consensus 29 ~G~~v~L~C~~~~~~~~~~~~~~v~W~k~~~g~~~~~l~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~DsG~Y~C~ 108 (268)
T 1x9q_A 29 LGDQASISCRSSQSLVHSNGNTYLRWYLQKPGQSPKVLIYKVSNRVSGVPDRFSGSGSGTDFTLKINRVEAEDLGVYFCS 108 (268)
T ss_dssp TTCCEEEEEEESSCCBCTTSCBCEEEEEECTTSCCEEEEETTTEECTTSCTTEEEEEETTEEEEEESSCCGGGCEEEEEE
T ss_pred CCCCEEEEeEecCCcccccCCceEEEEEECCCCCCEEEEEecCCCCCCCcccEEEEcCCCEEEEEECCCChhHCEEEEEE
Confidence 489999999998776 4789999853 211 00 0123699999999999999999
Q ss_pred EEcCCCC-ceeEeeEEEeeecC------CCe--------------eeecCCccccCCCCcEEEEeEEccCCC--CeEEEE
Q psy12725 53 IRNEQES-AQASGELKLGGRFD------PPV--------------IKESFSDETLNPGPNYYFKCIASGNPT--PEISWY 109 (119)
Q Consensus 53 ~~~~~~~-~~~~~~~~v~~~~~------~~~--------------~~~~~~~~~~~~g~~~~l~C~~~~~p~--~~~~W~ 109 (119)
+.+.... ......+.|..... +|. ....+....+.+|+.+.|.|.+.+.+. +.+.|+
T Consensus 109 ~~~~~~~~~~~~~~L~V~~~~~~~~p~~pp~~~~~~~~~~~~~~v~~~~~~~~~v~~G~~v~L~C~~~~~~~~~~~v~W~ 188 (268)
T 1x9q_A 109 QSTHVPWTFGGGTKLEIKSSADDAKKDAAKKDDAKKDDAKKDGGVKLDETGGGLVQPGGAMKLSCVTSGFTFGHYWMNWV 188 (268)
T ss_dssp ECSSSSCEECCCEEEC------------------------CGGGCEEEEECCEEECTTCCEEEEEEEESSCGGGCEEEEE
T ss_pred EecCCCceEcCCEEEEEccCccCCCccccccccccccccccccceEEECCCceEecCCCcEEEEEEecCccccccEEEEE
Confidence 9886432 11223333332110 110 112233456789999999999987753 689999
Q ss_pred EC
Q psy12725 110 LD 111 (119)
Q Consensus 110 ~~ 111 (119)
++
T Consensus 189 k~ 190 (268)
T 1x9q_A 189 RQ 190 (268)
T ss_dssp EE
T ss_pred Ee
Confidence 74
No 242
>3u83_A Poliovirus receptor-related protein 1; nectin-1, hinge region plasiticity, cell adhesion; HET: PG6; 2.50A {Homo sapiens} PDB: 3alp_A* 3u82_B 4fmf_A* 3sku_E* 2l7j_A
Probab=99.61 E-value=6.1e-15 Score=87.50 Aligned_cols=108 Identities=19% Similarity=0.375 Sum_probs=73.8
Q ss_pred CCccEEEEEEeccC----CCCeeEEeeCCcc---------------C--C----------CCCCCeEEEecCCCCCCeEE
Q psy12725 1 MLALKFFTCKYEGN----PVKTISWMKDGKP---------------V--P----------DHNEPVFRIDSVRKEDKGMY 49 (119)
Q Consensus 1 ~g~~~~l~c~~~~~----~~~~v~w~~~~~~---------------~--~----------~~~~~~l~~~~~~~~d~g~y 49 (119)
.|+.+.|.|.+.+. +.+.+.|++++.. . . ......|.|.+++..|.|.|
T Consensus 28 ~G~~v~L~C~~~~~~~~~~~~~v~W~k~~~~~~~~i~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~L~I~~v~~~D~G~Y 107 (331)
T 3u83_A 28 IGTDVVLHCSFANPLPSVKITQVTWQKSTNGSKQNVAIYNPSMGVSVLAPYRERVEFLRPSFTDGTIRLSRLELEDEGVY 107 (331)
T ss_dssp TTCCEEECCBCSSCCSSCEEEEEEEEEEETTEEEEEEEEETTTEEEECTTCTTTEEESSCSSSBCCEEECSCCGGGCEEE
T ss_pred ecCCEEEeeecCCCCCCCceEEEEEEEcCCCCCceEEEEeccCCCCcCcccCCceEecccCCCCceEEEcccCcccCcEE
Confidence 48999999998875 4457999995410 0 0 11346799999999999999
Q ss_pred EEEE-EcCCCCceeEeeEEEeeecCCCeeee--cCCccccCCC---CcEEEEeE-EccCCCCeEEEEEC
Q psy12725 50 QCVI-RNEQESAQASGELKLGGRFDPPVIKE--SFSDETLNPG---PNYYFKCI-ASGNPTPEISWYLD 111 (119)
Q Consensus 50 ~C~~-~~~~~~~~~~~~~~v~~~~~~~~~~~--~~~~~~~~~g---~~~~l~C~-~~~~p~~~~~W~~~ 111 (119)
.|.+ .+..+.......+.+. .+|.+.. .+....+.+| +.+.|.|. ..+.|.+.+.|+++
T Consensus 108 ~C~~~~~~~~~~~~~~~l~V~---~~p~~~~~~~~~~~~~~~g~~~~~~~l~C~~~~~~p~~~i~W~~~ 173 (331)
T 3u83_A 108 ICEFATFPTGNRESQLNLTVM---AKPTNWIEGTQAVLRAKKGQDDKVLVATCTSANGKPPSVVSWETR 173 (331)
T ss_dssp EEEEEEETTEEEEEEEEEEEE---BCCEEEEEECSSCEEECTTCCCCEEEEEEEEEEEBSCCEEEEEES
T ss_pred EEEEEecCCCccEEEEEEEEe---cCCcceeecCCCceeecCCCccceEEEEEEecCCcCCceEEEEcC
Confidence 9985 4444333334444443 2444432 3334456677 77999997 78889999999984
No 243
>1he7_A High affinity nerve growth factor receptor; transferase, TRK-receptor, strand-swapping; 2.0A {Homo sapiens} SCOP: b.1.1.4 PDB: 1wwa_X 1www_X
Probab=99.60 E-value=5.2e-15 Score=76.72 Aligned_cols=67 Identities=16% Similarity=0.320 Sum_probs=54.3
Q ss_pred CccEEEEEEeccCCCCeeEEeeCCccCCCCC----------------CCeEEEecCCCCCCeEEEEEEEcCCCCceeEee
Q psy12725 2 LALKFFTCKYEGNPVKTISWMKDGKPVPDHN----------------EPVFRIDSVRKEDKGMYQCVIRNEQESAQASGE 65 (119)
Q Consensus 2 g~~~~l~c~~~~~~~~~v~w~~~~~~~~~~~----------------~~~l~~~~~~~~d~g~y~C~~~~~~~~~~~~~~ 65 (119)
+..+.|.|.+.|.|.|.|+|+|||..+.... ...|.|..+...|.|.|+|.+.|..+.......
T Consensus 15 ~~~~~l~c~v~G~P~P~I~W~knG~~l~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~D~G~YtC~A~N~~G~~~~t~~ 94 (126)
T 1he7_A 15 MHHWCIPFSVDGQPAPSLRWLFNGSVLNETSFIFTEFLEPAANETVRHGCLRLNQPTHVNNGNYTLLAANPFGQASASIM 94 (126)
T ss_dssp CCEEEEEEEECCSSCCEEEEEETTEECCCCSSEEEEEECCCSSCCCEEEEEEEESCCGGGCEEEEEEEEETTEEEEEEEE
T ss_pred CccEEEEEEEeeeCCCeEEEEECCEECCCCCceeEEEeeccccccccceEEEECcCCCCCCEEEEEEEEECCCeEEEEEE
Confidence 4578899999999999999999998875421 146899999999999999999999876655554
Q ss_pred EEE
Q psy12725 66 LKL 68 (119)
Q Consensus 66 ~~v 68 (119)
+.+
T Consensus 95 l~v 97 (126)
T 1he7_A 95 AAF 97 (126)
T ss_dssp ECC
T ss_pred EEE
Confidence 444
No 244
>4acp_A IG gamma-1 chain C region; immune system, antibody, kifunensine; HET: NAG; 2.49A {Homo sapiens} PDB: 2j6e_A*
Probab=99.60 E-value=2.7e-15 Score=86.02 Aligned_cols=116 Identities=16% Similarity=0.260 Sum_probs=73.6
Q ss_pred CCccEEEEEEeccCC----CCeeEEeeCCccCCCC---------CC-----CeEEEecCCCCCCeEEEEEEEcCCCCcee
Q psy12725 1 MLALKFFTCKYEGNP----VKTISWMKDGKPVPDH---------NE-----PVFRIDSVRKEDKGMYQCVIRNEQESAQA 62 (119)
Q Consensus 1 ~g~~~~l~c~~~~~~----~~~v~w~~~~~~~~~~---------~~-----~~l~~~~~~~~d~g~y~C~~~~~~~~~~~ 62 (119)
+|+.+.|.|.+.+.. ...|+|++++..+... .. +.|.|......|.+.|.|.+.+.......
T Consensus 38 ~g~~~~L~C~v~g~~p~P~~i~v~W~k~g~~l~~~~~~~~~~~~~g~~~~~s~L~i~~~~~~d~~~YtC~v~h~~~~~~~ 117 (240)
T 4acp_A 38 ISRTPEVTCVVVDVSHEDPEVKFNWYVDGVEVHNAKTKPREEQYNSTYRVVSVLTVLHQDWLNGKEYKCKVSNKALPAPI 117 (240)
T ss_dssp SSSCCEEEEEEESCCC--CCCEEEEEETTEEECCCEECCCEEC---CEEEEEEEECCHHHHHHTCCEEEEEECC----CE
T ss_pred cCCCcEEEEEEeccccCCCccEEEEEECCcccCCceeccceECCCCeEEEEEEEEEechhccCCCEEEEEEEcCCCCccc
Confidence 388999999998863 3379999999875321 11 13444333445688999999997643222
Q ss_pred EeeEEE-eeecCCCeeeecCCccccCCCCcEEEEeEEccC-CCC-eEEEEECCEEcc
Q psy12725 63 SGELKL-GGRFDPPVIKESFSDETLNPGPNYYFKCIASGN-PTP-EISWYLDGKKLV 116 (119)
Q Consensus 63 ~~~~~v-~~~~~~~~~~~~~~~~~~~~g~~~~l~C~~~~~-p~~-~~~W~~~~~~~~ 116 (119)
...+.+ .....+|.+...+.......|+.+.|.|.+.+. |.+ .+.|+++|..+.
T Consensus 118 ~~~i~~~~~~~~~P~V~v~~~~~~~~~g~~~~L~C~~~gf~P~~i~v~W~k~g~~~~ 174 (240)
T 4acp_A 118 EKTISKAKGQPREPQVYTLPPSRDELTKNQVSLTCLVKGFYPSDIAVEWESNGQPEN 174 (240)
T ss_dssp EEEECCCCSCCBCCEEEEECCCGGGGGSSEEEEEEEEEEEBSSCCEEEEEETTEECS
T ss_pred cccccccCCCCCCCEEEEECCChHHhcCCceEEEEEEeEEeCCCcEEEEEECCEECC
Confidence 222221 111246666665544333358899999999885 544 799999998764
No 245
>2kkq_A Myotilin; unknown function, actin-binding, cell membrane, cytoplasm, cytoskeleton, disease mutation, immunoglobulin domain; NMR {Homo sapiens}
Probab=99.60 E-value=9.7e-15 Score=75.02 Aligned_cols=69 Identities=19% Similarity=0.285 Sum_probs=55.7
Q ss_pred CCccEEEEEEeccCCCCeeEEeeCCccCCCCC--------C---CeEEEecCCCCCCeEEEEEEEcCCCCceeEeeEEEe
Q psy12725 1 MLALKFFTCKYEGNPVKTISWMKDGKPVPDHN--------E---PVFRIDSVRKEDKGMYQCVIRNEQESAQASGELKLG 69 (119)
Q Consensus 1 ~g~~~~l~c~~~~~~~~~v~w~~~~~~~~~~~--------~---~~l~~~~~~~~d~g~y~C~~~~~~~~~~~~~~~~v~ 69 (119)
.|+.+.|.|.+.+.|.+.+.|++++..+.... . ..|.|.+++..|.|.|.|.+.|..+.......+.|.
T Consensus 29 ~G~~v~L~C~~~g~p~p~v~W~k~~~~~~~~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~N~~G~~~~~~~l~V~ 108 (116)
T 2kkq_A 29 EGDSVKLECQISAIPPPKLFWKRNNEMVQFNTDRISLYQDNTGRVTLLIKDVNKKDAGWYTVSAVNEAGVTTCNTRLDVT 108 (116)
T ss_dssp TTEEEEEEEEBCCBSCCEEEEEETTEECCCCBTTEEEEECTTCEEEEEEEEECGGGCEEEEEEEEETTEEEEEEEEEEEE
T ss_pred CCCcEEEEEEEeccCCCEEEEEECCEECcCCCCeEEEEeCCCCeEEEEECCCCcccCEEEEEEEEcCCCeEEEEEEEEEe
Confidence 48899999999999999999999988765321 1 179999999999999999999987766555555554
No 246
>2bk8_A Connectin, M1, titin heart isoform N2-B; IG domain, M-BAND, structural protein, muscle, antibo; 1.69A {Homo sapiens}
Probab=99.60 E-value=1.7e-14 Score=71.80 Aligned_cols=68 Identities=18% Similarity=0.379 Sum_probs=55.5
Q ss_pred CCccEEEEEEeccC-CCCeeEEeeCCccCCCCC---------CCeEEEecCCCCCCeEEEEEEEcCCCCceeEeeEEE
Q psy12725 1 MLALKFFTCKYEGN-PVKTISWMKDGKPVPDHN---------EPVFRIDSVRKEDKGMYQCVIRNEQESAQASGELKL 68 (119)
Q Consensus 1 ~g~~~~l~c~~~~~-~~~~v~w~~~~~~~~~~~---------~~~l~~~~~~~~d~g~y~C~~~~~~~~~~~~~~~~v 68 (119)
.|+.+.|.|.+.+. |.+.+.|++++..+.... ...|.|.+++..|.|.|.|.+.|..+.......+.|
T Consensus 15 ~G~~v~l~C~~~g~~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~a~n~~g~~~~~~~l~V 92 (97)
T 2bk8_A 15 EGGHVKYVCKIENYDQSTQVTWYFGVRQLENSEKYEITYEDGVAILYVKDITKLDDGTYRCKVVNDYGEDSSYAELFV 92 (97)
T ss_dssp TTCCEEEEEEEESCCTTCEEEEEETTEECCSSSSEEEEEETTEEEEEECSCCGGGCEEEEEEEECSSCEEEEEEEEEE
T ss_pred CCCcEEEEEEEeccCCCCEEEEEECCEECcCCCCEEEEEcCCeEEEEEecCChhhCeEEEEEEECCCCeEeEEEEEEE
Confidence 48999999999997 889999999988765321 137899999999999999999998876665555555
No 247
>1ow0_A IG alpha-1 chain C region; IGA1, fcari, CD89, antibody, immunoglobulin-LIK immune system; HET: NAG FUL BMA GAL SIA FUC MAN NDG; 3.10A {Homo sapiens} SCOP: b.1.1.2 b.1.1.2 PDB: 2qej_A*
Probab=99.60 E-value=4.3e-16 Score=87.78 Aligned_cols=114 Identities=16% Similarity=0.216 Sum_probs=73.1
Q ss_pred CccEEEEEEeccCCC---CeeEEeeCCccCCC--------C-CC-----CeEEEecCCCCCCeEEEEEEEcCCCCceeEe
Q psy12725 2 LALKFFTCKYEGNPV---KTISWMKDGKPVPD--------H-NE-----PVFRIDSVRKEDKGMYQCVIRNEQESAQASG 64 (119)
Q Consensus 2 g~~~~l~c~~~~~~~---~~v~w~~~~~~~~~--------~-~~-----~~l~~~~~~~~d~g~y~C~~~~~~~~~~~~~ 64 (119)
|+.++|.|.+.+.+. +.|.| ++ ..... . .. ..|.|..+...|.|.|.|.+.+.........
T Consensus 19 G~~v~L~C~~~g~~p~~~~~v~W-~~-~~~~~~~~~~~~~~~~g~~~~~~~L~I~~~~~~D~g~Y~C~~~~~~~~~~~~~ 96 (214)
T 1ow0_A 19 GSEANLTCTLTGLRDASGVTFTW-TP-SSGKSAVQGPPERDLCGCYSVSSVLPGCAEPWNHGKTFTCTAAYPESKTPLTA 96 (214)
T ss_dssp CSSCCCEEEETTCCSCCCCCCCB-SS-CSSCCCEECCCCCCSTTCCCEEEECTTTHHHHHHTCEEEEEECCSSCSSCEEE
T ss_pred CCCcEEEEEEeeeECCCCeEEEE-cC-CCCCCcccCCceECCCCcEEEEEEEEEeHHHcCCCCeEEEEEecCCCCCceeE
Confidence 889999999988743 68999 43 32211 0 01 1344455556789999999998764322222
Q ss_pred eEEEeeecCCCeeeecCC-ccccCCCCcEEEEeEEccC-CC-CeEEEEECCEEccc
Q psy12725 65 ELKLGGRFDPPVIKESFS-DETLNPGPNYYFKCIASGN-PT-PEISWYLDGKKLVN 117 (119)
Q Consensus 65 ~~~v~~~~~~~~~~~~~~-~~~~~~g~~~~l~C~~~~~-p~-~~~~W~~~~~~~~~ 117 (119)
.+.+.....+|.+...+. ...+..|+.+.|.|.+.+. |. +.+.|++||..+..
T Consensus 97 ~i~~~~~~~~P~v~~~~~~~~~~~~g~~~~L~C~~~g~~P~~~~v~W~k~g~~l~~ 152 (214)
T 1ow0_A 97 TLSKSGNTFRPEVHLLPPPSEELALNELVTLTCLARGFSPKDVLVRWLQGSQELPR 152 (214)
T ss_dssp EEECCSSCCCCEEEEECCCTTTTTSSSEEEEEEEEEEESSSCCEEEEEETTEECCG
T ss_pred eeccCCCCCCCEEEecCCCHHHhccCCceEEEEEEeeeECCCcEEEEEECCEECCC
Confidence 222111124666654433 2346788899999999886 43 48999999988754
No 248
>3mtr_A N-CAM-1, NCAM-1, neural cell adhesion molecule 1; immunoglobulin domain, fibronectin type III repeat, CE adhesion; 1.80A {Homo sapiens}
Probab=99.60 E-value=2.9e-14 Score=80.16 Aligned_cols=108 Identities=21% Similarity=0.306 Sum_probs=75.0
Q ss_pred CCccEEEEEEeccCCCCeeEEeeCCccCCCCC-----------CCeEEEecCCCCCCeEEEEEEEcCCCCceeEeeEEEe
Q psy12725 1 MLALKFFTCKYEGNPVKTISWMKDGKPVPDHN-----------EPVFRIDSVRKEDKGMYQCVIRNEQESAQASGELKLG 69 (119)
Q Consensus 1 ~g~~~~l~c~~~~~~~~~v~w~~~~~~~~~~~-----------~~~l~~~~~~~~d~g~y~C~~~~~~~~~~~~~~~~v~ 69 (119)
.|+.+.|.|.+.+.|.+.+.|++++..+.... ...|.|.++...|.|.|.|.+.|..+.......+.+.
T Consensus 32 ~G~~v~l~C~~~g~p~p~i~W~~~g~~l~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~l~v~ 111 (215)
T 3mtr_A 32 EGNQVNITCEVFAYPSATISWFRDGQLLPSSNYSNIKIYNTPSASYLEVTPDSENDFGNYNCTAVNRIGQESLEFILVQA 111 (215)
T ss_dssp TTCCEEEEEEEEEESCCEEEEEETTEESSCSSSCSEEEEEETTEEEEEECCCSGGGCEEEEEEEECSSCEEEEEEEEEEC
T ss_pred CCCCEEEEEEEeecCCCEEEEEECCeECCCCCCccEEEecCCCeeEEEEecCChhhCeEEEEEEEECCCceEEEEEEEEC
Confidence 48999999999999999999999998875432 3578999999999999999999998766655555554
Q ss_pred eecCCCeeeecCCccccCCCCcEEEEeEEc----cCCCC--eEEEEECCE
Q psy12725 70 GRFDPPVIKESFSDETLNPGPNYYFKCIAS----GNPTP--EISWYLDGK 113 (119)
Q Consensus 70 ~~~~~~~~~~~~~~~~~~~g~~~~l~C~~~----~~p~~--~~~W~~~~~ 113 (119)
....+|..... ...+..+.+.|... +.|.. .+.|.+++.
T Consensus 112 ~~P~~p~~~~~-----~~~~~~~~l~w~~p~~~~~~pi~~y~v~~~~~~~ 156 (215)
T 3mtr_A 112 DTPSSPSIDQV-----EPYSSTAQVQFDEPEATGGVPILKYKAEWRAVGE 156 (215)
T ss_dssp CCCCCCEEEEE-----EEETTEEEEEEECCSCCCSSCEEEEEEEEEETTC
T ss_pred CCCCCCcceEE-----EEecceEEEEEecCCccCCCceEEEEEEEEECCC
Confidence 32222322211 12345677777632 22322 477887654
No 249
>2wqr_A IG epsilon chain C region; immune system, immunoglobulin domain, glycoprotein; HET: NAG BMA MAN PG4; 1.90A {Homo sapiens} PDB: 2y7q_B* 1o0v_A* 3h9y_A* 3h9z_A* 3ha0_A* 1fp5_A 1f6a_B 1g84_A
Probab=99.60 E-value=6e-16 Score=91.85 Aligned_cols=110 Identities=14% Similarity=0.210 Sum_probs=70.2
Q ss_pred ccEEEEEEeccC-C-CCeeEEeeCCccCCCCC--------C------CeEEEecCCCCCCeEEEEEEEcCCCCceeEeeE
Q psy12725 3 ALKFFTCKYEGN-P-VKTISWMKDGKPVPDHN--------E------PVFRIDSVRKEDKGMYQCVIRNEQESAQASGEL 66 (119)
Q Consensus 3 ~~~~l~c~~~~~-~-~~~v~w~~~~~~~~~~~--------~------~~l~~~~~~~~d~g~y~C~~~~~~~~~~~~~~~ 66 (119)
+.+.|.|.+.+. | .+.|.|+|++..+.... . ..|.+......|.|.|.|.+.+..+.....+.+
T Consensus 25 ~~v~L~C~~~g~~P~~~~v~W~k~g~~l~~~~~~~~~~~~~g~~~~~s~l~i~~~~~~d~g~Y~C~a~n~~~~~~~~~~~ 104 (323)
T 2wqr_A 25 PTIQLLCLVSGYTPGTIQITWLEDGQVMDVDLSTASTTQEGELASTQSELTLSQKHWLSDRTYTCQVTYQGHTFEDSTKK 104 (323)
T ss_dssp SEEEEEEEEEEECCCCEEEEEEETTEECCGGGEEEEEEEETTEEEEEEEEEEEHHHHHTTCCEEEEEEETTEEEEEEECC
T ss_pred CcEEEEEEEeCeECCCeEEEEEECCEEcccceecCCcCccCCcEEEEEEEEEcHHHcCCCCcEEEEEEeCCCCcceeeec
Confidence 689999999875 4 46899999998764211 1 124455555568999999999875432222211
Q ss_pred EEeeecCCCee-eecCCccccCCCCcEEEEeEEccC-CCC---eEEEEECC
Q psy12725 67 KLGGRFDPPVI-KESFSDETLNPGPNYYFKCIASGN-PTP---EISWYLDG 112 (119)
Q Consensus 67 ~v~~~~~~~~~-~~~~~~~~~~~g~~~~l~C~~~~~-p~~---~~~W~~~~ 112 (119)
.+......|.+ ...+....+..|+.+.|.|.+.+. |.+ .+.|++++
T Consensus 105 ~~~~~~~~p~v~~~~p~~~~v~~G~~v~L~C~~~g~~P~p~~~~i~W~k~~ 155 (323)
T 2wqr_A 105 CADSNPRGVSAYLSRPSPFDLFIRKSPTITCLVVDLAPSKGTVQLTWSRAS 155 (323)
T ss_dssp CCCSSGGGCEEEECCCCHHHHHTSSCCEEEEEEEEECCCSSCCEEEEEETT
T ss_pred CCCCCCCCCEEEEcCCCHHHhccCCeEEEEEEEeccCCCCCceEEEEEECC
Confidence 01111112333 222333346789999999998875 455 89999964
No 250
>3puc_A Titin; I-SET IG-like domain, M-BAND, transferase; 0.96A {Homo sapiens}
Probab=99.59 E-value=1.1e-14 Score=72.62 Aligned_cols=68 Identities=28% Similarity=0.520 Sum_probs=55.3
Q ss_pred CCccEEEEEEeccCCCCeeEEeeCCccCCCCC---------CCeEEEecCCCCCCeEEEEEEEcCCCCceeEeeEEE
Q psy12725 1 MLALKFFTCKYEGNPVKTISWMKDGKPVPDHN---------EPVFRIDSVRKEDKGMYQCVIRNEQESAQASGELKL 68 (119)
Q Consensus 1 ~g~~~~l~c~~~~~~~~~v~w~~~~~~~~~~~---------~~~l~~~~~~~~d~g~y~C~~~~~~~~~~~~~~~~v 68 (119)
.|+.+.|.|.+.+.|.+.+.|++++..+.... ...|.|.+++.+|.|.|.|.+.|..+.......+.|
T Consensus 20 ~G~~~~l~C~~~g~p~p~v~W~~~g~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~l~V 96 (99)
T 3puc_A 20 SDSVAKFAVKATGEPRPTAIWTKDGKAITQGGKYKLSEDKGGFFLEIHKTDTSDSGLYTCTVKNSAGSVSSSCKLTI 96 (99)
T ss_dssp SSSCEEEEEEEEEESCCEEEEEETTEECCSSSSEEEEEETTEEEEEECSCCGGGCEEEEEEEEETTEEEEEEEEEEE
T ss_pred CCCcEEEEEEEEecCCCEEEEEECCEECcCCCCEEEEEeCCEEEEEECCCCcccCEEEEEEEEeCCCcEeEEEEEEE
Confidence 48899999999998999999999998775432 126899999999999999999998766555555554
No 251
>2e7c_A Myosin-binding protein C, fast-type; IG-like domain, fast MYBP-C, C-protein, skeletal muscle fast-isoform, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.59 E-value=1.8e-14 Score=74.19 Aligned_cols=69 Identities=19% Similarity=0.393 Sum_probs=56.2
Q ss_pred CCccEEEEEEeccCCCCeeEEeeCCccCCCC--------CCCeEEEecCCCCCCeEEEEEEEcCCCCceeEeeEEEe
Q psy12725 1 MLALKFFTCKYEGNPVKTISWMKDGKPVPDH--------NEPVFRIDSVRKEDKGMYQCVIRNEQESAQASGELKLG 69 (119)
Q Consensus 1 ~g~~~~l~c~~~~~~~~~v~w~~~~~~~~~~--------~~~~l~~~~~~~~d~g~y~C~~~~~~~~~~~~~~~~v~ 69 (119)
.|+.+.|.|.+.+.|.+.+.|++++..+... ....|.|.+++..|.|.|.|.+.|..+.......+.+.
T Consensus 38 ~G~~~~l~C~~~g~P~p~i~W~k~g~~l~~~~~~~~~~~~~~~L~i~~~~~~D~G~Y~C~a~N~~G~~~~~~~l~V~ 114 (118)
T 2e7c_A 38 VGEQLNLVVPFQGKPRPQVVWTKGGAPLDTSRVHVRTSDFDTVFFVRQAARSDSGEYELSVQIENMKDTATIRIRVV 114 (118)
T ss_dssp SSSCEEEEEEEEEESCCEEEEEETTEECCCSSCEEEECSSEEEEEESSCCTTTCEEEEEEEECSSCEECCEEEEEEE
T ss_pred CCCEEEEEEEEccCCCCEEEEEECCEECCCCcEEEEECCCeEEEEECCCChhcCEEEEEEEEeCCCeEEEEEEEEEE
Confidence 4899999999999999999999999877521 12359999999999999999999998765555555553
No 252
>2dm3_A KIAA0992 protein, palladin; beta-sandwich, myopalladin, actin-associated scaffold, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.59 E-value=2e-15 Score=76.73 Aligned_cols=70 Identities=31% Similarity=0.511 Sum_probs=57.0
Q ss_pred CCccEEEEEEeccCCCCeeEEeeCCccCCCCC----------CCeEEEecCCCCCCeEEEEEEEcCCCCceeEeeEEEee
Q psy12725 1 MLALKFFTCKYEGNPVKTISWMKDGKPVPDHN----------EPVFRIDSVRKEDKGMYQCVIRNEQESAQASGELKLGG 70 (119)
Q Consensus 1 ~g~~~~l~c~~~~~~~~~v~w~~~~~~~~~~~----------~~~l~~~~~~~~d~g~y~C~~~~~~~~~~~~~~~~v~~ 70 (119)
.|+.+.|.|.+.+.|.+.+.|++++..+.... ...|.|.+++.+|.|.|.|.+.|..+.......+.|..
T Consensus 23 ~G~~v~l~C~~~g~p~p~v~W~~~g~~~~~~~~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~a~n~~g~~~~~~~l~V~~ 102 (110)
T 2dm3_A 23 EGKLCRMDCKVSGLPTPDLSWQLDGKPVRPDSAHKMLVRENGVHSLIIEPVTSRDAGIYTCIATNRAGQNSFSLELVVAA 102 (110)
T ss_dssp SSSCBCCEEEEECSSCCEEECBBSSSBCCCCSSEEEEECTTSCEEEEESSCCGGGCSBBCEEEECSSCEEEECCEEEEEC
T ss_pred CCCEEEEEEEEEEcCCCEEEEEECCEECCCCCceEEEEecCCeEEEEEeeCCcccCEEEEEEEECCCCEEEEEEEEEEeC
Confidence 48899999999999999999999988765321 24799999999999999999999887665556666543
No 253
>1mq8_A ICAM-1, intercellular adhesion molecule-1, CD54 antigen; IG superfamily, rossmann fold, metal mediated protein interf immune system; HET: NAG; 3.30A {Homo sapiens} SCOP: b.1.1.3 b.1.1.4
Probab=99.59 E-value=5.7e-16 Score=90.92 Aligned_cols=117 Identities=15% Similarity=0.183 Sum_probs=43.1
Q ss_pred CCccEEEEEEeccC-CCC--eeEEeeCCccCCCCC------CCeEEEecCCCCCCeEEEEEEEcCCCCc------eeEee
Q psy12725 1 MLALKFFTCKYEGN-PVK--TISWMKDGKPVPDHN------EPVFRIDSVRKEDKGMYQCVIRNEQESA------QASGE 65 (119)
Q Consensus 1 ~g~~~~l~c~~~~~-~~~--~v~w~~~~~~~~~~~------~~~l~~~~~~~~d~g~y~C~~~~~~~~~------~~~~~ 65 (119)
+|+.++|.|.+.+. |.. .|+|||+++.+.... ...+.+...+..+.+.|.|.+.+..... ..+..
T Consensus 100 ~G~~~~LtC~v~g~~P~~~l~itW~kg~~~l~~~~~~~~~~~~~l~~~~~~~D~g~~~~C~A~~~l~~~g~~l~~~~s~~ 179 (291)
T 1mq8_A 100 VGKNLTLRCQVEGGAPRANLTVVLLRGEKELKREPAVGEPAEVTTTVLVRRDHHGANFSCRTELDLRPQGLELFENTSAP 179 (291)
T ss_dssp SSCCCEEEEEECCCBSTTTEEEEEESSSSEEEEEECCBTTEEEEEECCCSSSCSSCEEEEEEEEECGGGTSCEEEECCCC
T ss_pred CCCCEEEEEEecCccCCCCcEEEEEECCEEeecccCCCCCceEEEEeeeeeccCCceEEEEEEecCCccCCccccccccc
Confidence 48999999999875 433 589999997664211 1234444344455569999999764321 12233
Q ss_pred EEEeeecCCCeeeecCCccccCCCCcEEEEeEEccCCCC---eEEEEECCEEccc
Q psy12725 66 LKLGGRFDPPVIKESFSDETLNPGPNYYFKCIASGNPTP---EISWYLDGKKLVN 117 (119)
Q Consensus 66 ~~v~~~~~~~~~~~~~~~~~~~~g~~~~l~C~~~~~p~~---~~~W~~~~~~~~~ 117 (119)
..+.+.+.|+..........+.+|+.++|.|.+.+.+++ .++|+++|+.+..
T Consensus 180 ~~L~V~~~P~~~~~~~~p~~l~eG~~v~l~C~~~g~~P~~~~~v~w~~~g~~l~~ 234 (291)
T 1mq8_A 180 YQLQTFVLPATPPQLVSPRVLEVDTQGTVVCSLDGLFPVSEAQVHLALGDQRLNP 234 (291)
T ss_dssp EECBC--------------------------------------------------
T ss_pred eEEEEEecCCCCceecCCcCccCCCeEEEEEEcCCCCCCcccEEEEEECCEecCc
Confidence 444443333321111112357899999999999987554 5999999988763
No 254
>3shs_A HOC head outer capsid protein; immunoglobulin-like domain, phage capsid decorative protein, interaction with bacteria; 1.95A {Enterobacteria phage RB49}
Probab=99.59 E-value=2.2e-13 Score=78.53 Aligned_cols=115 Identities=16% Similarity=0.257 Sum_probs=80.3
Q ss_pred CCccEEEEEEeccC-C---CCeeEEeeCCccCCCCCCCeEEEecCCCCCCeEEEEEEEcCCCCceeEeeEEEeeecCCCe
Q psy12725 1 MLALKFFTCKYEGN-P---VKTISWMKDGKPVPDHNEPVFRIDSVRKEDKGMYQCVIRNEQESAQASGELKLGGRFDPPV 76 (119)
Q Consensus 1 ~g~~~~l~c~~~~~-~---~~~v~w~~~~~~~~~~~~~~l~~~~~~~~d~g~y~C~~~~~~~~~~~~~~~~v~~~~~~~~ 76 (119)
.|+.++|.|.+.+. | ...|.|+|++..+.. ....+.+..+...+.|.|.|.+.+..+....+..+.+... ..+.
T Consensus 16 ~GdsVTLTatVaGGkP~pspyTYqWyKDG~~IsG-aT~tLti~s~t~sdSG~YqCvVTDa~Gcs~tSs~VtVT~~-a~l~ 93 (304)
T 3shs_A 16 AGDGFTLTATVAGDEPLPSNLTYTWTKDDQPHEN-NTATLTVADATSENAGSYKVTVQDTDTMTSVESEVFLMEE-AELI 93 (304)
T ss_dssp TTCCEEEEEEEEESSSCCCCEEEEEEETTEECSC-CSSEEEESSCCGGGCEEEEEEEEETTTCCEEECCCEEECB-CCEE
T ss_pred CCCCEEEEEEecCCCCCCCCceEEEEECCccccC-CcceEEeeeccccCCeEEEEEEEECCCCeeeeeeEEEecc-Ccee
Confidence 38999999998653 5 347999999988754 4558888899999999999999987665544444444331 2223
Q ss_pred eeec-CCccccCCCCcEEEEeEE--c-cCC-----CCeEEEEECCEEccc
Q psy12725 77 IKES-FSDETLNPGPNYYFKCIA--S-GNP-----TPEISWYLDGKKLVN 117 (119)
Q Consensus 77 ~~~~-~~~~~~~~g~~~~l~C~~--~-~~p-----~~~~~W~~~~~~~~~ 117 (119)
+... +....+..+..+.|.+.+ . |.+ ...++|++++..+..
T Consensus 94 i~it~P~s~~vssg~sVtL~aTVt~SGGtppA~~~~yTYQWyKngt~Isg 143 (304)
T 3shs_A 94 VNITEPQHFYVSSQTDVELHATVKFSGGKTPADNYELHYSWSKGEDVIDT 143 (304)
T ss_dssp EEESSCSEEEECSSCCEEEEEEEEETTSCCSSTTCCCEEEEEETTEEEES
T ss_pred EEecCCCceeccCCCeEEEEEEEeccCCCCcccCCCceeEEeeCCeEccC
Confidence 3222 222334567888888876 4 344 358999999988754
No 255
>1wwb_X Protein (brain derived neurotrophic factor receptor TRKB); TRK receptor, receptor tyrosine kinase, 3D-domain swapping, transferase; 2.10A {Homo sapiens} SCOP: b.1.1.4 PDB: 1hcf_X
Probab=99.59 E-value=1.6e-14 Score=72.73 Aligned_cols=67 Identities=15% Similarity=0.289 Sum_probs=54.7
Q ss_pred CccEEEEEEeccCCCCeeEEeeCCccCCCCCC----------Ce----EEEecCCCCCCeEEEEEEEcCCCCceeEeeEE
Q psy12725 2 LALKFFTCKYEGNPVKTISWMKDGKPVPDHNE----------PV----FRIDSVRKEDKGMYQCVIRNEQESAQASGELK 67 (119)
Q Consensus 2 g~~~~l~c~~~~~~~~~v~w~~~~~~~~~~~~----------~~----l~~~~~~~~d~g~y~C~~~~~~~~~~~~~~~~ 67 (119)
|+.+.|.|.+.|.|.|.+.|++++..+..... .. |.|.+++.+|.|.|+|.+.|..+.......+.
T Consensus 16 ~~~~~~~c~v~G~P~P~i~W~k~g~~l~~~~~~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~A~N~~G~~~~~~~l~ 95 (103)
T 1wwb_X 16 DHHWCIPFTVKGNPKPALQWFYNGAILNESKYICTKIHVTNHTEYHGCLQLDNPTHMNNGDYTLIAKNEYGKDEKQISAH 95 (103)
T ss_dssp CCEEEEEEEEECSSCCEEEEEETTEEECCCSSEEEEEEEECSSEEEEEEEEESCCGGGCEEEEEEEECSSCEEEEEEEEC
T ss_pred CcEEEEEEEEEEeCCCEEEEEECCEECCCCCcEeEEEEecCCcEEEEEEEECCCCcccCEEEEEEEEeCCCcEeEEEEEE
Confidence 56788999999999999999999987754321 22 99999999999999999999987766555555
Q ss_pred E
Q psy12725 68 L 68 (119)
Q Consensus 68 v 68 (119)
+
T Consensus 96 V 96 (103)
T 1wwb_X 96 F 96 (103)
T ss_dssp C
T ss_pred E
Confidence 4
No 256
>3caf_A Fibroblast growth factor receptor 2; FGFR2, D2, ATP-binding, disease MU ectodermal dysplasia, glycoprotein, heparin-binding, immuno domain, kinase; 1.96A {Homo sapiens} PDB: 3cu1_A* 3euu_A 3dar_A 1wvz_A
Probab=99.59 E-value=5.6e-15 Score=73.85 Aligned_cols=67 Identities=33% Similarity=0.561 Sum_probs=54.1
Q ss_pred CCccEEEEEEeccCCCCeeEEeeCCccCCCC----------CCCeEEEecCCCCCCeEEEEEEEcCCCCceeEeeEE
Q psy12725 1 MLALKFFTCKYEGNPVKTISWMKDGKPVPDH----------NEPVFRIDSVRKEDKGMYQCVIRNEQESAQASGELK 67 (119)
Q Consensus 1 ~g~~~~l~c~~~~~~~~~v~w~~~~~~~~~~----------~~~~l~~~~~~~~d~g~y~C~~~~~~~~~~~~~~~~ 67 (119)
.|+.+.|.|.+.+.|.+.+.|++++..+... ....|.|..++..|.|.|.|.+.|..+.......+.
T Consensus 22 ~G~~v~l~C~~~g~p~p~v~W~~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~a~N~~g~~~~~~~l~ 98 (100)
T 3caf_A 22 AANTVKFRCPAGGNPMPTMRWLKNGKEFKQEHRIGGYKVRNQHWSLIMESVVPSDKGNYTCVVENEYGSINHTYHLD 98 (100)
T ss_dssp TTCCEEEECCEEEESCCEEEEEETTEECCGGGSTTCCEEEGGGTEEEECSCCGGGCEEEEEEEEETTEEEEEEEEEE
T ss_pred CCCEEEEEEEccccCCCEEEEEECCEEcccccccccEEEecCeEEEEEccCCcCCCEEEEEEEEeCCCEEEEEEEEE
Confidence 3899999999999899999999998776432 124799999999999999999999876554444444
No 257
>1gxe_A Myosin binding protein C, cardiac-type; cytoskeleton, muscle, IGI, thick filament, immunoglobulin domain; NMR {Homo sapiens} SCOP: b.1.1.4
Probab=99.58 E-value=9e-15 Score=77.35 Aligned_cols=68 Identities=22% Similarity=0.405 Sum_probs=53.7
Q ss_pred CCccEEEEEEeccCCCCeeEEeeCC----------------------------ccCCCC----------CCCeEEEecCC
Q psy12725 1 MLALKFFTCKYEGNPVKTISWMKDG----------------------------KPVPDH----------NEPVFRIDSVR 42 (119)
Q Consensus 1 ~g~~~~l~c~~~~~~~~~v~w~~~~----------------------------~~~~~~----------~~~~l~~~~~~ 42 (119)
.|+.+.|.|.+.|.|.|.|.|+|++ ..+... ....|.|.+++
T Consensus 32 ~G~~v~L~C~~~G~P~P~i~W~k~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~r~~i~~~~~~s~L~I~~v~ 111 (139)
T 1gxe_A 32 AGNKLRLDVPISGDPAPTVIWQKAITQGNKAPARPAPDAPEDTGDSDEWVFDKKLLCETEGRVRVETTKDRSIFTVEGAE 111 (139)
T ss_dssp SSSCCCCEEECCSBSCCEEEEEEECCCSCSSCCCCCCCCCCCCCCSSCCCCSCCCCCSCSSSCEEEEETTEEEEECSCCC
T ss_pred CCCeEEEEEEEEEcCCCeEEEEECCcccccccccccccccccccccccccccceeecCCCCeEEEEeCCCEEEEEECCCC
Confidence 3889999999999999999999988 333111 11358999999
Q ss_pred CCCCeEEEEEEEcCCCCceeEeeEEE
Q psy12725 43 KEDKGMYQCVIRNEQESAQASGELKL 68 (119)
Q Consensus 43 ~~d~g~y~C~~~~~~~~~~~~~~~~v 68 (119)
..|.|.|.|.+.|..+.....+.+.|
T Consensus 112 ~~DsG~Y~C~A~N~~G~~~~~~~L~V 137 (139)
T 1gxe_A 112 KEDEGVYTVTVKNPVGEDQVNLTVKV 137 (139)
T ss_dssp TTTCEEEEEEEECSSCEEEEEEEEEE
T ss_pred cccCEEEEEEEEeCCceEEEEEEEEE
Confidence 99999999999999876655555554
No 258
>2ckn_A Basic fibroblast growth factor receptor 1; kinase, transferase, heparin-binding, nucleotide-binding, immunoglobulin domain, alternatice splicing; NMR {Mus musculus}
Probab=99.58 E-value=1.6e-14 Score=71.64 Aligned_cols=66 Identities=18% Similarity=0.403 Sum_probs=53.5
Q ss_pred CCccEEEEEEeccCCCCeeEEeeCCccCCCC-----CCCeEEEecCCCCCCeEEEEEEEcCCCCceeEeeEE
Q psy12725 1 MLALKFFTCKYEGNPVKTISWMKDGKPVPDH-----NEPVFRIDSVRKEDKGMYQCVIRNEQESAQASGELK 67 (119)
Q Consensus 1 ~g~~~~l~c~~~~~~~~~v~w~~~~~~~~~~-----~~~~l~~~~~~~~d~g~y~C~~~~~~~~~~~~~~~~ 67 (119)
.|+.+.|.|.+.+.| +.+.|++++..+... ....|.|.+++.+|.|.|.|.+.|..+.......+.
T Consensus 23 ~G~~v~l~C~~~g~p-p~i~W~k~g~~~~~~~~~~~~~~~L~i~~~~~~D~G~Y~C~a~n~~g~~~~~~~l~ 93 (95)
T 2ckn_A 23 PGDLLQLRCRLRDDV-QSINWLRDGVQLVESNRTRITGEEVEVRDSIPADSGLYACVTSSPSGSDTTYFSVN 93 (95)
T ss_dssp TTSCEEEECCEESSC-CEEEEEBTTBCCCCCSSEEECSSEEEESSCCGGGSEEEEEEEEETTEEEEEEEEEE
T ss_pred CCCeEEEEEECCCCC-CceEEEECCEecCCCCCEEEeCCEEEECCCChHHCEEEEEEeccCCCcEEEEEEEE
Confidence 489999999999887 799999998877532 246799999999999999999999876554444444
No 259
>1iga_A IGA1; immunoglobulin; NMR {Homo sapiens} PDB: 2esg_A 2qtj_A 3chn_A 1r70_B 3cm9_A
Probab=99.58 E-value=8e-14 Score=86.59 Aligned_cols=112 Identities=18% Similarity=0.335 Sum_probs=75.1
Q ss_pred CCccEEEEEEeccCC--CCeeEEeeCC--ccC-------------------CC---------CCCCeEEEecCCCCCCeE
Q psy12725 1 MLALKFFTCKYEGNP--VKTISWMKDG--KPV-------------------PD---------HNEPVFRIDSVRKEDKGM 48 (119)
Q Consensus 1 ~g~~~~l~c~~~~~~--~~~v~w~~~~--~~~-------------------~~---------~~~~~l~~~~~~~~d~g~ 48 (119)
.|+.++|.|.+.+.+ ...+.|||.. ..+ .. .....|.|.+++.+|+|.
T Consensus 15 ~G~~v~L~C~~~~~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~~L~I~~v~~~D~G~ 94 (475)
T 1iga_A 15 PGASVKVSCKASGYSFTSYGLHWVRQAPGQRLEWMGWISAGTGNTKYSQKFRGRVTFTRDTSATTAYMGLSSLRPEDTAV 94 (475)
T ss_pred CCCCEEEEEEecCCCCCCceEEEEEeCCCCCcEEEEEEecCCCceecCcccCCceEEEEcCCCCeEEEEECCCChhhCEE
Confidence 489999999998654 5689999842 111 00 012479999999999999
Q ss_pred EEEEEEcCCCC------ceeEeeEEEeee-cCCCeeeecCCccccCCCCcEEEEeEEccC-CC-C-eEEEEECCE
Q psy12725 49 YQCVIRNEQES------AQASGELKLGGR-FDPPVIKESFSDETLNPGPNYYFKCIASGN-PT-P-EISWYLDGK 113 (119)
Q Consensus 49 y~C~~~~~~~~------~~~~~~~~v~~~-~~~~~~~~~~~~~~~~~g~~~~l~C~~~~~-p~-~-~~~W~~~~~ 113 (119)
|.|.+.+..+. ......+.|... ..+|.+...... ...+|+.+.|.|.+.+. |. + .+.|++++.
T Consensus 95 Y~C~~~~~~~~~~~~~~~~~~~~l~V~~~~~~~P~i~~~~~~-~~~~g~~v~L~C~~~g~~P~~p~~v~W~~~~~ 168 (475)
T 1iga_A 95 YYCARDPYGGGKSEFDYWGQGTLVTVSSASPTSPKVFPLSLC-STQPDGNVVIACLVQGFFPQEPLSVTWSESGQ 168 (475)
T ss_pred EEEEEeccCCCccceeeecCceEEEeccCCCcCCeEEecCcc-ccCCCCeEEEEEEEeeecCCCceEEEEcCCCc
Confidence 99999986531 112334444321 124444433222 23689999999999887 55 5 899999875
No 260
>3irg_B Obscurin-like protein 1; IG-like, titin, OBSL1, complex, alternative splicing, ATP-binding, calcium, calmodulin-binding, cardiomyopathy; 1.30A {Homo sapiens} PDB: 3knb_B 2wp3_O* 2wwm_C 2wwk_O
Probab=99.57 E-value=2.3e-14 Score=72.38 Aligned_cols=68 Identities=22% Similarity=0.387 Sum_probs=54.8
Q ss_pred CCccEEEEEEeccCCCCeeEEeeCCccCCCCCC---------CeEEEecCCCCCCeEEEEEEEcCCCCceeEeeEEE
Q psy12725 1 MLALKFFTCKYEGNPVKTISWMKDGKPVPDHNE---------PVFRIDSVRKEDKGMYQCVIRNEQESAQASGELKL 68 (119)
Q Consensus 1 ~g~~~~l~c~~~~~~~~~v~w~~~~~~~~~~~~---------~~l~~~~~~~~d~g~y~C~~~~~~~~~~~~~~~~v 68 (119)
.|+.+.|.|.+.+.|.+.+.|++++..+..... ..|.|.+++.+|.|.|.|.+.|..+.......+.+
T Consensus 27 ~G~~v~l~C~~~g~p~p~i~W~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~D~G~Y~C~a~n~~g~~~~~~~l~V 103 (107)
T 3irg_B 27 SGAEAELKCVVLGEPPPVVVWEKGGQQLAASERLSFPADGAEHGLLLTAALPTDAGVYVCRARNAAGEAYAAAAVTV 103 (107)
T ss_dssp TTSCEEEEEEEEEESCCEEEEEETTEECCCCSSEECCEETTEEEEEESSCCGGGCEEEEEEEEETTEEEEEEEEEEE
T ss_pred CCCeEEEEEEEeecCCCEEEEEECCeECCCCCcEEEEeCCCEEEEEEccCCHHhCEEEEEEEEcCCCcEEEEEEEEE
Confidence 488999999999989999999999887654221 27999999999999999999998766554555554
No 261
>1ypz_F T-cell receptor gamma chain, beta-2-microglobulin; H2-T22 protein, T cell receptor delta, immune system; HET: NAG MAN FUC; 3.40A {Mus musculus} SCOP: b.1.1.1 b.1.1.2
Probab=99.57 E-value=1.3e-14 Score=82.62 Aligned_cols=116 Identities=17% Similarity=0.217 Sum_probs=73.7
Q ss_pred CCccEEEEEEeccC--CCCeeEEeeCC--ccCC----------------CC-----------CCCeEEEecCCCCCCeEE
Q psy12725 1 MLALKFFTCKYEGN--PVKTISWMKDG--KPVP----------------DH-----------NEPVFRIDSVRKEDKGMY 49 (119)
Q Consensus 1 ~g~~~~l~c~~~~~--~~~~v~w~~~~--~~~~----------------~~-----------~~~~l~~~~~~~~d~g~y 49 (119)
.|+.|+|.|.+.+. +...+.|||.. ..+. .. ....|.|.+++.+|+|.|
T Consensus 15 ~G~~v~L~C~~~~~~~~~~~v~W~r~~~~~~~~~l~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~~L~I~~v~~~D~G~Y 94 (230)
T 1ypz_F 15 RDETAQISCKVFIESFRSVTIHWYRQKPNQGLEFLLYVLATPTHIFLDKEYKKMEASKNPSASTSILTIYSLEEEDEAIY 94 (230)
T ss_dssp TTSCEEEEEEECCGGGGGCCEEEEEECTTTCCEEEEEECSSCCCEEEESSSSEEEEEECCTTTEEEEEECSCCGGGCSEE
T ss_pred CCCcEEEEEEeeccccCccEEEEEEECCCCCCEEEEEEecCCeeecCcccCCeEEEEEcCCCCEEEEEECcCChhhCEEE
Confidence 48999999999764 45689999842 1110 00 123799999999999999
Q ss_pred EEEEEcC--CCC--ceeEeeEEEeeec------CCCeeeec-CCccccCCCCcEEEEeEEccC-CC-CeEEEEE-CCEEc
Q psy12725 50 QCVIRNE--QES--AQASGELKLGGRF------DPPVIKES-FSDETLNPGPNYYFKCIASGN-PT-PEISWYL-DGKKL 115 (119)
Q Consensus 50 ~C~~~~~--~~~--~~~~~~~~v~~~~------~~~~~~~~-~~~~~~~~g~~~~l~C~~~~~-p~-~~~~W~~-~~~~~ 115 (119)
.|.+.+. ... ......+.|.... .+|..... +....+..|+.+.|.|.+.+. |. +.+.|++ +|..+
T Consensus 95 ~C~~~~~~~~~~~~~~~~~~L~V~~~~~~l~~~~~p~~~v~~p~~~~v~~g~~~~L~C~~~g~~P~~~~v~W~~~~g~~l 174 (230)
T 1ypz_F 95 YCSYGEGSSGFHKVFAEGTKLIVIPSDKRLDADISPKPTIFLPSVAETNLHKTGTYLCLLEAFFPDVIRVYWKEKDGNTI 174 (230)
T ss_dssp EEEECCTTTCCCCEECSCEEEEEECCCTTCCSCCSCCCCEECCCHHHHHHHSCEEEEEEEEEESSCCCEEEEECTTSSCB
T ss_pred EEEEECCCCCcccccCCCEEEEEecccccCcccCCCCceEECCCchhhccCCcceEEEEEeeecCCCeEEEEEccCCeEc
Confidence 9999874 111 1122344443100 12332222 222334568899999999876 65 4899999 87655
Q ss_pred c
Q psy12725 116 V 116 (119)
Q Consensus 116 ~ 116 (119)
.
T Consensus 175 ~ 175 (230)
T 1ypz_F 175 L 175 (230)
T ss_dssp C
T ss_pred c
Confidence 3
No 262
>1nct_A Titin; cell adhesion, glycoprotein, transmembrane, repeat, brain, immunoglobulin fold, alternative splicing, signal, muscle protein; NMR {Homo sapiens} SCOP: b.1.1.4 PDB: 1ncu_A 1tnm_A 1tnn_A
Probab=99.57 E-value=5.1e-15 Score=74.91 Aligned_cols=68 Identities=28% Similarity=0.582 Sum_probs=56.3
Q ss_pred CCccEEEEEEeccCCCCeeEEeeCCccCCCCC---------CCeEEEecCCCCCCeEEEEEEEcCCCCceeEeeEEE
Q psy12725 1 MLALKFFTCKYEGNPVKTISWMKDGKPVPDHN---------EPVFRIDSVRKEDKGMYQCVIRNEQESAQASGELKL 68 (119)
Q Consensus 1 ~g~~~~l~c~~~~~~~~~v~w~~~~~~~~~~~---------~~~l~~~~~~~~d~g~y~C~~~~~~~~~~~~~~~~v 68 (119)
.|+.+.|.|.+.+.|.+.+.|++++..+.... ...|.|.+++..|.|.|.|.+.|..+.......+.|
T Consensus 28 ~G~~v~L~C~~~g~p~p~v~W~k~g~~l~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~N~~G~~~~~~~l~V 104 (106)
T 1nct_A 28 EGESARFSCDTDGEPVPTVTWLRKGQVLSTSARHQVTTTKYKSTFEISSVQASDEGNYSVVVENSEGKQEAEFTLTI 104 (106)
T ss_dssp SSSCEECCEEEECSSCCBCCBCSSSSCCTTCSSEEEEECSSEEEEEECCCCSSCCSEEEECCBCSSCBCCEEEEEEE
T ss_pred CCCcEEEEEEEEEcCCCEEEEEECCEECCCCCCEEEEECCCEEEEEECcCCchhCEEEEEEEEeCCCeEEEEEEEEE
Confidence 48999999999999999999999988765322 357899999999999999999998877665655554
No 263
>1fhg_A Telokin; immunoglobulin fold, beta barrel, contractIle protein; 2.00A {Meleagris gallopavo} SCOP: b.1.1.4 PDB: 1tlk_A
Probab=99.57 E-value=2.7e-14 Score=76.74 Aligned_cols=69 Identities=29% Similarity=0.490 Sum_probs=56.6
Q ss_pred CCccEEEEEEeccCCCCeeEEeeCCccCCCCC----------CCeEEEecCCCCCCeEEEEEEEcCCCCceeEeeEEEe
Q psy12725 1 MLALKFFTCKYEGNPVKTISWMKDGKPVPDHN----------EPVFRIDSVRKEDKGMYQCVIRNEQESAQASGELKLG 69 (119)
Q Consensus 1 ~g~~~~l~c~~~~~~~~~v~w~~~~~~~~~~~----------~~~l~~~~~~~~d~g~y~C~~~~~~~~~~~~~~~~v~ 69 (119)
.|+.+.|.|.+.+.|.+.+.|++++..+.... ...|.|.+++..|.|.|.|.+.|..+.......+.|.
T Consensus 55 ~G~~v~L~C~~~g~P~p~v~W~k~g~~~~~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~N~~G~~~~~~~l~V~ 133 (154)
T 1fhg_A 55 EGSAARFDCKVEGYPDPEVMWFKDDNPVKESRHFQIDYDEEGNCSLTISEVCGDDDAKYTCKAVNSLGEATCTAELLVE 133 (154)
T ss_dssp TTSCEEEEEEEEEESCCEEEEEETTEECCCSSSEEEEECTTCEEEEEESSCCGGGCEEEEEEEEETTEEEEEEEEEEEE
T ss_pred CCCeEEEEEEEEEecCCEEEEEECCEECCCCCcEEEEECCCCeEEEEECCCChhcCEEEEEEEEECCCeEEEEEEEEEe
Confidence 48899999999999999999999998765421 2379999999999999999999987766555556554
No 264
>1zvo_C Myeloma immunoglobulin D delta; immunoglobulin fold, antibody, immune system; NMR {Homo sapiens}
Probab=99.56 E-value=1.4e-13 Score=86.38 Aligned_cols=112 Identities=15% Similarity=0.167 Sum_probs=76.3
Q ss_pred CccEEEEEEeccC-C-CCeeEEeeCCccCCCC---------CC------CeEEEecCCCCCCeEEEEEEEcCCCCceeEe
Q psy12725 2 LALKFFTCKYEGN-P-VKTISWMKDGKPVPDH---------NE------PVFRIDSVRKEDKGMYQCVIRNEQESAQASG 64 (119)
Q Consensus 2 g~~~~l~c~~~~~-~-~~~v~w~~~~~~~~~~---------~~------~~l~~~~~~~~d~g~y~C~~~~~~~~~~~~~ 64 (119)
|+.++|.|.+.+. | ...|+|++++..+... .. +.|.|......|.|.|.|.+.|...... ..
T Consensus 312 g~~~~L~C~v~g~~P~~~~i~W~k~g~~~~~~~~~~~~~~~~~gt~~~~s~L~i~~~~~~d~g~y~C~a~n~~~~~~-~~ 390 (512)
T 1zvo_C 312 RDKATFTCFVVGSDLKDAHLTWEVAGKVPTGGVEEGLLERHSNGSQSQHSRLTLPRSLWNAGTSVTCTLNHPSLPPQ-RL 390 (512)
T ss_pred CCceEEEEEEeceECCCeEEEEEECCEeccCceeccceecCCCCeEEEEEEEEEchHHhcCCCeEEEEEEeCCCCCC-ce
Confidence 8899999999886 3 3489999998765410 11 2377777778899999999999765432 22
Q ss_pred eEEEee-e--cCCCeeeecCCccccCCCCcEE-EEeEEccCCCC--eEEEEECCEEccc
Q psy12725 65 ELKLGG-R--FDPPVIKESFSDETLNPGPNYY-FKCIASGNPTP--EISWYLDGKKLVN 117 (119)
Q Consensus 65 ~~~v~~-~--~~~~~~~~~~~~~~~~~g~~~~-l~C~~~~~p~~--~~~W~~~~~~~~~ 117 (119)
.+.... . ..+|.+...+... .|+.+. |.|.+.|.+++ .+.|++||..+..
T Consensus 391 ~~~~~~~~~~~~~p~v~~~~~~~---~~~~~~~L~C~~~g~~P~~i~v~W~k~g~~~~~ 446 (512)
T 1zvo_C 391 MALREPAAQAPVKLSLNLLASSD---PPEAASWLLCEVSGFSPPNILLMWLEDQREVNT 446 (512)
T ss_pred eEEeecCCCCCCCCEEEEEccCc---CCCCceEEEEEEeeeCCCCcEEEEEECCeECcC
Confidence 222111 0 1345555443322 788899 99999986544 5899999998754
No 265
>3irg_A Titin; IG-like, titin, OBSL1, complex, alternative splicing, ATP-binding, calcium, calmodulin-binding, cardiomyopathy; 1.30A {Homo sapiens} PDB: 3knb_A 3q5o_A 2wp3_T* 2wwk_T 2wwm_D 2y9r_T*
Probab=99.56 E-value=2.3e-14 Score=71.48 Aligned_cols=68 Identities=22% Similarity=0.458 Sum_probs=54.8
Q ss_pred CCccEEEEEEeccCCCCeeEEeeCCccCCCC-----------CCCeEEEecCCCCCCeEEEEEEEcCCCCceeEeeEEE
Q psy12725 1 MLALKFFTCKYEGNPVKTISWMKDGKPVPDH-----------NEPVFRIDSVRKEDKGMYQCVIRNEQESAQASGELKL 68 (119)
Q Consensus 1 ~g~~~~l~c~~~~~~~~~v~w~~~~~~~~~~-----------~~~~l~~~~~~~~d~g~y~C~~~~~~~~~~~~~~~~v 68 (119)
.|+.+.|.|.+.+.|.+.+.|++++..+... ....|.|..++.+|.|.|.|.+.|..+.......+.+
T Consensus 19 ~G~~~~l~C~~~g~p~p~v~W~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~a~n~~g~~~~~~~l~V 97 (100)
T 3irg_A 19 EGKVLTVACAFTGEPTPEVTWSCGGRKIHSQEQGRFHIENTDDLTTLIIMDVQKQDGGLYTLSLGNEFGSDSATVNIHI 97 (100)
T ss_dssp TTSEEEEEEEEEEESCCEEEEEETTEECCTTGGGTEEEEECSSEEEEEESSCCGGGCEEEEEEEEETTEEEEEEEEEEE
T ss_pred CCCcEEEEEEEEEcCCCceEEEECCEEeecCCCCEEEEEecCCEEEEEEeecCcccCEEEEEEEEeCCCcEEEEEEEEE
Confidence 4889999999999999999999998876421 1256899999999999999999998766554555544
No 266
>2lu7_A Obscurin-like protein 1; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative, structural prote; NMR {Homo sapiens}
Probab=99.56 E-value=2.4e-14 Score=69.54 Aligned_cols=63 Identities=21% Similarity=0.368 Sum_probs=49.6
Q ss_pred CCccEEEEEEeccCCCCeeEEeeCCccCCCC---------CCCeEEEecCCCCCCeEEEEEEEcCCCCceeEeeEEE
Q psy12725 1 MLALKFFTCKYEGNPVKTISWMKDGKPVPDH---------NEPVFRIDSVRKEDKGMYQCVIRNEQESAQASGELKL 68 (119)
Q Consensus 1 ~g~~~~l~c~~~~~~~~~v~w~~~~~~~~~~---------~~~~l~~~~~~~~d~g~y~C~~~~~~~~~~~~~~~~v 68 (119)
.|+.+.|.|.+.+ |.+.|.|+|++..+... ....|.|.+++.+|.|.|.|.+.+. .....+.|
T Consensus 10 ~G~~v~l~C~vs~-p~p~v~W~k~g~~l~~~~~~~~~~~~~~~~L~I~~~~~~D~G~Y~C~a~n~----~~~a~l~V 81 (84)
T 2lu7_A 10 PGGDLELVVHLSG-PGGPVRWYKDGERLASQGRVQLEQAGARQVLRVQGARSGDAGEYLCDAPQD----SRIFLVSV 81 (84)
T ss_dssp TTSCEEEECCCSC-CSTTCEEEETTEECCCCSSEEEEECSSCEEEEESSCSSTTCEEEEEECTTT----CEEEEEEE
T ss_pred cCCCEEEEEEECC-CCcEEEEEECCEEccccccEEEeecCCeEEEEecCCCCcccEEEEEEECCE----EEEEEEEE
Confidence 4899999999966 88899999999887543 2346999999999999999987553 33444554
No 267
>2cr3_A Basic fibroblast growth factor receptor 1; IG fold, FGFR1, BFGF-R, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.56 E-value=2.4e-14 Score=71.53 Aligned_cols=66 Identities=20% Similarity=0.438 Sum_probs=52.3
Q ss_pred CCccEEEEEEeccCCCCeeEEeeCCccCCCCC-----CCeEEEecCCCCCCeEEEEEEEcCCCCceeEeeEE
Q psy12725 1 MLALKFFTCKYEGNPVKTISWMKDGKPVPDHN-----EPVFRIDSVRKEDKGMYQCVIRNEQESAQASGELK 67 (119)
Q Consensus 1 ~g~~~~l~c~~~~~~~~~v~w~~~~~~~~~~~-----~~~l~~~~~~~~d~g~y~C~~~~~~~~~~~~~~~~ 67 (119)
.|+.+.|.|.+.+.| +.+.|+|++..+.... ...|.|..++..|.|.|.|.+.|..+.......+.
T Consensus 17 ~G~~v~L~C~~~g~p-p~i~W~k~g~~~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~a~n~~g~~~~~~~l~ 87 (99)
T 2cr3_A 17 PGDLLQLRCRLRDDV-QSINWLRDGVQLAESNRTRITGEEVEVQDSVPADSGLYACVTSSPSGSDTTYFSVN 87 (99)
T ss_dssp TTSCEEEECCCCSSC-CEEEEEESSSBCCCCSSEEECSSEEEETTCCTTTCEEEEEEEEETTEEEEEEEEEC
T ss_pred CCCcEEEEEEecCCC-CeEEEEECCEECCCCCcEEEECCEEEEccCCHHHCEEEEEEEEeCCceEEEEEEEE
Confidence 489999999998876 7999999998774432 45799999999999999999999866543333333
No 268
>3tv3_H PGT128 heavy chain, IG gamma-1 chain C region; FAB, HIV-1 neutralizing antibody, GP120, immune system; HET: PCA MAN GOL EPE; 1.29A {Homo sapiens} PDB: 3tyg_H* 3twc_H* 3tje_H* 3thm_H* 4fqq_H 2xzc_H* 2xza_H* 3b2u_H* 3b2v_H* 3mly_H 3mlz_H 4fq2_H 2ykl_H* 3tnm_H 4fqc_H* 4fq1_H* 2yk1_H* 3mlx_H 2jix_D 2vxq_H ...
Probab=99.56 E-value=2.3e-14 Score=81.95 Aligned_cols=114 Identities=17% Similarity=0.299 Sum_probs=72.1
Q ss_pred CCccEEEEEEeccCC----CCeeEEeeCC--cc---C---C------C---------------------CCCCeEEEecC
Q psy12725 1 MLALKFFTCKYEGNP----VKTISWMKDG--KP---V---P------D---------------------HNEPVFRIDSV 41 (119)
Q Consensus 1 ~g~~~~l~c~~~~~~----~~~v~w~~~~--~~---~---~------~---------------------~~~~~l~~~~~ 41 (119)
.|+.|+|.|.+.+.+ ...+.||+.. .. + . . .....|.|.++
T Consensus 14 ~G~~v~L~C~~~~~~~~~~~~~v~W~rq~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~~L~I~~v 93 (239)
T 3tv3_H 14 ASETLSLTCAVSGDSTAACNSFWGWVRQPPGKGLEWVGSLSHCASYWNRGWTYHNPSLKSRLTLALDTPKNLVFLKLNSV 93 (239)
T ss_dssp TTSCEEEEEEEESSCTTSSSCEEEEEEECTTSCCEEEEEEECCCCTTSSCEEEECTTTGGGEEEEEEGGGTEEEEEECSC
T ss_pred CCCCEEEEEEEcCCcccccceEEEEEEECCCCCcEEEEEEecccccccCCceecCccccCCEEEEEECCCCEEEEEECCC
Confidence 489999999997654 3489999832 11 0 0 0 01234999999
Q ss_pred CCCCCeEEEEEEEcCCC-------------CceeEeeEEEee-ecCCCeeeecCCccccCCCCcEEEEeEEccC-CCC-e
Q psy12725 42 RKEDKGMYQCVIRNEQE-------------SAQASGELKLGG-RFDPPVIKESFSDETLNPGPNYYFKCIASGN-PTP-E 105 (119)
Q Consensus 42 ~~~d~g~y~C~~~~~~~-------------~~~~~~~~~v~~-~~~~~~~~~~~~~~~~~~g~~~~l~C~~~~~-p~~-~ 105 (119)
+.+|+|.|.|.+.+..+ .......+.+.. ...+|.+...+....+..|+.+.|.|.+.+. |.+ .
T Consensus 94 ~~~DsG~Y~C~~~~~~~~~~~~w~~~~~~~~~~~~t~l~V~~~~~~~P~v~~~~~~~~~~~g~~v~l~C~~~~~~p~~~~ 173 (239)
T 3tv3_H 94 TAADTATYYCARFGGEVLRYTDWPKPAWVDLWGRGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVT 173 (239)
T ss_dssp CGGGCEEEEEEEEEEECSSCSSSCEEEEEEEECCCEEEEECCCCCBCCEEEEECCCCCC--TTEEEEEEEEEEEBSSCCE
T ss_pred ChhhCEEEEEEEecCccccccccccccceeeeCCCcEEeeccCCCcCCEEEEECCChhhccCCcEEEEEEEeeEeCCCeE
Confidence 99999999999876421 011122344431 1234555544444455679999999999874 444 4
Q ss_pred EEEEECCEE
Q psy12725 106 ISWYLDGKK 114 (119)
Q Consensus 106 ~~W~~~~~~ 114 (119)
+.|++++..
T Consensus 174 v~W~~~g~~ 182 (239)
T 3tv3_H 174 VSWNSGALT 182 (239)
T ss_dssp EEEGGGTBC
T ss_pred EEEEECCcc
Confidence 889998853
No 269
>3cx2_A Myosin-binding protein C, cardiac-type; protonation states, actin-binding, cardiomyopathy, cell adhesion, disease mutation, immunoglobulin domain; 1.30A {Homo sapiens} PDB: 2v6h_A 2avg_A
Probab=99.56 E-value=2.4e-14 Score=72.64 Aligned_cols=68 Identities=13% Similarity=0.206 Sum_probs=52.4
Q ss_pred CCccEEEEEEeccCCC---CeeEEeeCCccCCC------------------CCCCeEEEecCCCCCCeEEEEEEEcCCCC
Q psy12725 1 MLALKFFTCKYEGNPV---KTISWMKDGKPVPD------------------HNEPVFRIDSVRKEDKGMYQCVIRNEQES 59 (119)
Q Consensus 1 ~g~~~~l~c~~~~~~~---~~v~w~~~~~~~~~------------------~~~~~l~~~~~~~~d~g~y~C~~~~~~~~ 59 (119)
.|+.++|.|.+.+.|. +.|.|||++..... .....|.|.+++..|.|.|.|.+.|..+.
T Consensus 18 ~G~~v~L~C~~~g~p~~~~p~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~N~~G~ 97 (108)
T 3cx2_A 18 VGGSITFSARVAGASLLKPPVVKWFKGKWVDLSSKVGQHLQLHDSYDRASKVYLFELHITDAQPAFTGSYRCEVSTKDKF 97 (108)
T ss_dssp TTCCEEEEEEEECC-CCSCCEEEEEETTTEEGGGGCBTTEEEEEEEETTTTEEEEEEEECSCCGGGCEEEEEEEECSSCE
T ss_pred CCCCEEEEEEECCCccCCCcEEEEccCCcccccccCCceEEEeeEEecccccceEEEEEecCCCccCEEEEEEEecCCCc
Confidence 4899999999999887 89999997621100 01357999999999999999999999877
Q ss_pred ceeEeeEEE
Q psy12725 60 AQASGELKL 68 (119)
Q Consensus 60 ~~~~~~~~v 68 (119)
......+.|
T Consensus 98 ~~~~~~L~V 106 (108)
T 3cx2_A 98 DCSNFNLTV 106 (108)
T ss_dssp EEEEEEEEE
T ss_pred eEEEEEEEE
Confidence 666666655
No 270
>1gl4_B Basement membrane-specific heparan sulfate proteoglycan core protein; immunoglobulin-like domain, extracellular matrix; HET: EPE; 2.0A {Mus musculus} SCOP: b.1.1.4
Probab=99.56 E-value=6.5e-14 Score=69.75 Aligned_cols=68 Identities=22% Similarity=0.306 Sum_probs=53.5
Q ss_pred CCccEEEEEEec-cCCCCeeEEeeCCccCCCC----CCCeEEEecCCCCCCeEEEEEEEcCCCCceeEeeEEE
Q psy12725 1 MLALKFFTCKYE-GNPVKTISWMKDGKPVPDH----NEPVFRIDSVRKEDKGMYQCVIRNEQESAQASGELKL 68 (119)
Q Consensus 1 ~g~~~~l~c~~~-~~~~~~v~w~~~~~~~~~~----~~~~l~~~~~~~~d~g~y~C~~~~~~~~~~~~~~~~v 68 (119)
.|+.+.|.|.+. +.|.+.+.|+|++...... ....|.|.+++.+|.|.|.|.+.|..+.......+.+
T Consensus 24 ~G~~v~l~C~~~~~~p~~~v~W~k~~~~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~a~n~~g~~~~~~~l~V 96 (98)
T 1gl4_B 24 PGADVTFICTAKSKSPAYTLVWTRLHNGKLPSRAMDFNGILTIRNVQPSDAGTYVCTGSNMFAMDQGTATLHV 96 (98)
T ss_dssp TTCCEEEEEEEEESSSCCEEEEEEGGGBCCCTTEEEETTEEEECSCCGGGCEEEEEEEECSSCEEEEEEEEEE
T ss_pred cCCCEEEEEeCCCCCCCcEEEEEeCCCCCCCceeecCCCEEEEeCCChhhCEEEEEEecCCCCccccEEEEEE
Confidence 489999999998 6788999999975433221 2568999999999999999999998776555555544
No 271
>3fku_X Neutralizing antibody F10; influenza, hemagglutinin, SCFV, F membrane, envelope protein, fusion protein, membrane, trans virion; HET: NAG BMA; 3.20A {Homo sapiens}
Probab=99.55 E-value=7.2e-14 Score=81.62 Aligned_cols=109 Identities=14% Similarity=0.220 Sum_probs=71.8
Q ss_pred CCccEEEEEEeccC--CCCeeEEeeCC--ccCC----------------------------CCCCCeEEEecCCCCCCeE
Q psy12725 1 MLALKFFTCKYEGN--PVKTISWMKDG--KPVP----------------------------DHNEPVFRIDSVRKEDKGM 48 (119)
Q Consensus 1 ~g~~~~l~c~~~~~--~~~~v~w~~~~--~~~~----------------------------~~~~~~l~~~~~~~~d~g~ 48 (119)
.|+.|+|.|.+.+. +.+.+.|||.. .... ......|.|.+++.+|+|.
T Consensus 14 ~G~~v~L~C~~~~~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~sL~I~~v~~~DsG~ 93 (280)
T 3fku_X 14 PGSSVKVSCTSSEVTFSSFAISWVRQAPGQGLEWLGGISPMFGTPNYAQKFQGRVTITADQSTRTAYMDLRSLRSEDTAV 93 (280)
T ss_dssp TTCCEEEEEEECCSCCTTSCEEECCBCSSSCCCCCEEECTTTCCEEECGGGTTTCEEEEETTTTEEEEEECSCCSTTCEE
T ss_pred CCCcEEEEEEeeccCCCCeEEEEEEeCCCCCCEEEEEEeccCCccccCcccCCcEEEEEeCCCCEEEEEECCCChhhCEE
Confidence 48999999999775 55789999732 1110 0011369999999999999
Q ss_pred EEEEEEcCC---------CCceeEeeEEEee-e-----------cCCCeeeecCCccccCCCCcEEEEeEEcc-CC-CCe
Q psy12725 49 YQCVIRNEQ---------ESAQASGELKLGG-R-----------FDPPVIKESFSDETLNPGPNYYFKCIASG-NP-TPE 105 (119)
Q Consensus 49 y~C~~~~~~---------~~~~~~~~~~v~~-~-----------~~~~~~~~~~~~~~~~~g~~~~l~C~~~~-~p-~~~ 105 (119)
|.|.+.+.. ........+.+.. . ..++.+...+. ..+.+|+.++|.|.+.+ .+ .+.
T Consensus 94 Y~C~~~~~~~~~g~~~~~~~~~~~~~L~V~~~~~~~~~~~~~~~~~~~~v~~~p~-~~v~~G~~v~L~C~~~~~~~~~~~ 172 (280)
T 3fku_X 94 YYCARSPSYICSGGTCVFDHWGQGTLVTVSSGGGGSGGGGSGGGGIQPGLTQPPS-VSKGLRQTATLTCTGNSNNVGNQG 172 (280)
T ss_dssp CCEEECSSSSSSSTTCCCCEECCCCEEEECC--------------CCCSBBCCSE-EEECTTCCEEEEEECCCCCCCTTC
T ss_pred EEEEEecCCccccccccccEECCCEEEEEcCCCCccCCCCCCceEeeeEEEeCCc-EEEecCCCEEEEEEecCCCCCCce
Confidence 999998761 1111223344432 0 01333443333 66889999999999887 43 368
Q ss_pred EEEEE
Q psy12725 106 ISWYL 110 (119)
Q Consensus 106 ~~W~~ 110 (119)
+.|++
T Consensus 173 v~W~r 177 (280)
T 3fku_X 173 AAWLQ 177 (280)
T ss_dssp CEEEE
T ss_pred EEEEE
Confidence 99987
No 272
>4dkd_C Macrophage colony-stimulating factor 1 receptor; dimeric four-helix bundle cytokine, receptor tyrosine kinase glycosylation; HET: NAG BMA; 3.00A {Homo sapiens}
Probab=99.55 E-value=3.5e-15 Score=87.09 Aligned_cols=107 Identities=16% Similarity=0.280 Sum_probs=74.4
Q ss_pred CCccEEEEEEeccCCCCeeEEeeCCccCC----CCCCCeEEEecCCCCCCeEEEEEEEcCCCCceeEeeEEEeeecCCCe
Q psy12725 1 MLALKFFTCKYEGNPVKTISWMKDGKPVP----DHNEPVFRIDSVRKEDKGMYQCVIRNEQESAQASGELKLGGRFDPPV 76 (119)
Q Consensus 1 ~g~~~~l~c~~~~~~~~~v~w~~~~~~~~----~~~~~~l~~~~~~~~d~g~y~C~~~~~~~~~~~~~~~~v~~~~~~~~ 76 (119)
.|+.+.|.|.+.+. +.|++++.... ......|.|.+++..|.|.|.|.+.+..+.......+.+.. +|.
T Consensus 18 ~G~~v~L~C~~~~~----v~W~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~~~n~~~~~~~~~~l~V~~---~~~ 90 (292)
T 4dkd_C 18 PGATVTLRCVGNGS----VEWDGPPSPHWTLYSDGSSSILSTNNATFQNTGTYRCTEPGDPLGGSAAIHLYVKD---PAR 90 (292)
T ss_dssp TTCCEEEEEECSSC----CCBCCCCCSSCEECCBTTEEEEEESSCCGGGCSCEEECCCC----CCEEECCEECC---SSC
T ss_pred CCCcEEEEEcCCCc----eEEccCCCCceEEeccCceEEEEEcccccccCEEEEEEEccCCCCcceEEEEEEcC---ccc
Confidence 48999999999873 89997654321 11235899999999999999999988765554555555532 332
Q ss_pred -eeecCCccccCCCCcEEEEeEEccCCC--CeEEEEEC-CEEc
Q psy12725 77 -IKESFSDETLNPGPNYYFKCIASGNPT--PEISWYLD-GKKL 115 (119)
Q Consensus 77 -~~~~~~~~~~~~g~~~~l~C~~~~~p~--~~~~W~~~-~~~~ 115 (119)
+...+....+.+|+.+.|.|.+.+ |. +.+.|+++ +..+
T Consensus 91 ~~~~~~~~~~v~~g~~v~l~C~~~~-~~~~~~v~W~~~~~~~~ 132 (292)
T 4dkd_C 91 PWNVLAQEVVVFEDQDALLPCLLTD-PVLEAGVSLVRVRGRPL 132 (292)
T ss_dssp CEEESCSEEEEETTSCEECCEEESS-GGGGSSEEEEEGGGCCC
T ss_pred cccccCCeEEEcCCCcEEEeeeCCC-CCcceeEEEEecCCCcc
Confidence 344445556789999999999987 44 68999986 4443
No 273
>3qhz_H Human monoclonal antibody DEL2D1, FAB heavy chain; immunoglobulin, immune recognition, influenza A hemagglutini system; 1.55A {Homo sapiens} PDB: 3lzf_H* 3qrg_H* 3mod_H 3mob_H 3moa_H 3lev_H* 3idg_B 3d0l_B 3d0v_B 3idi_B 3idj_B 3idm_B* 3idn_B* 1tjg_H* 1tjh_H* 1tji_H* 2pr4_H 3drq_B 2p8m_B 2p8p_B ...
Probab=99.53 E-value=4.6e-14 Score=80.28 Aligned_cols=113 Identities=13% Similarity=0.260 Sum_probs=67.9
Q ss_pred CCccEEEEEEeccC--CCCee--EEeeCC--cc---C-------C-------C-------------CCCCeEEEecCCCC
Q psy12725 1 MLALKFFTCKYEGN--PVKTI--SWMKDG--KP---V-------P-------D-------------HNEPVFRIDSVRKE 44 (119)
Q Consensus 1 ~g~~~~l~c~~~~~--~~~~v--~w~~~~--~~---~-------~-------~-------------~~~~~l~~~~~~~~ 44 (119)
+|+.|+|.|.+.+. ....+ .|||.. .. + . . .....|.|.+++.+
T Consensus 14 ~G~~v~L~C~~~~~~~~~~~i~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~sL~I~~v~~~ 93 (232)
T 3qhz_H 14 PTQTLTLTCSFSGFSLSTSGMSVSWIRQPPGKALEWLALIDWDDDTYYITYSSSLKTRLTISKDTSKSQVVLTMTNMDPV 93 (232)
T ss_dssp TTSCEEEEEEEESCGGGCTTCEEEEEEECTTSCCEEEEEEESSSSCEEECCCTTTTTTEEEEEETTTTEEEEEECSCCGG
T ss_pred CCCcEEEEEEEeCcccccceeEeEEEEECCCCCcEEEEEEECCCCccccccCccccCceEEEeccCCCEEEEEECcCChh
Confidence 48999999999753 22445 999732 10 0 0 0 01135999999999
Q ss_pred CCeEEEEEEEcCC--------CCceeEeeEEEee-ecCCCeeeecCCccccCCCCcEEEEeEEccCCCC--eEEEEECCE
Q psy12725 45 DKGMYQCVIRNEQ--------ESAQASGELKLGG-RFDPPVIKESFSDETLNPGPNYYFKCIASGNPTP--EISWYLDGK 113 (119)
Q Consensus 45 d~g~y~C~~~~~~--------~~~~~~~~~~v~~-~~~~~~~~~~~~~~~~~~g~~~~l~C~~~~~p~~--~~~W~~~~~ 113 (119)
|+|.|.|.+.+.. ........+.+.. ...+|.+........+..|+.+.|.|.+.+.+++ .+.|++++.
T Consensus 94 DsG~Y~C~~~~~~~~~~~~~~~~~~~~~~l~V~~~~~~~P~v~~~~~~~~~~~g~~v~L~C~~~~~~P~~~~v~W~~~g~ 173 (232)
T 3qhz_H 94 DTATYYCARTLRVSGDYVRDFDLWGRGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGAL 173 (232)
T ss_dssp GCEEEEEEEECCC---CCCCCCEECCCEEEEECSSCCBCCEEEEECC-------CEEEEEEEEEEEBSSCCEEEEGGGTB
T ss_pred hCEEEEEEEeeccCccccccceeeCCCeEEEEecCCCCCCEEEEecccccccCCCcEEEEEEEeeEeCCCeEEEEEECCE
Confidence 9999999998652 1122223444431 1235555533334455679999999999875433 578999885
No 274
>3s35_X Vascular endothelial growth factor receptor 2; antibody, KDR, VEGF receptor, cancer, immune system-transfer complex; HET: NAG; 2.20A {Homo sapiens} PDB: 3s36_X 3s37_X
Probab=99.53 E-value=1.5e-14 Score=74.75 Aligned_cols=77 Identities=14% Similarity=0.261 Sum_probs=55.9
Q ss_pred CCccEEEEEEeccC--CCCeeEEeeCCccCCC-----C------------CCCeEEEecCCCCCCeEEEEEEEcCCCCce
Q psy12725 1 MLALKFFTCKYEGN--PVKTISWMKDGKPVPD-----H------------NEPVFRIDSVRKEDKGMYQCVIRNEQESAQ 61 (119)
Q Consensus 1 ~g~~~~l~c~~~~~--~~~~v~w~~~~~~~~~-----~------------~~~~l~~~~~~~~d~g~y~C~~~~~~~~~~ 61 (119)
.|+.+.|.|.+.+. +.+.+.|++++..+.. . ....|.|.+++.+|+|.|+|.+.|..+...
T Consensus 22 ~G~~v~L~C~~~g~p~~~~~i~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~I~~v~~~DsG~Y~C~a~n~~g~~~ 101 (122)
T 3s35_X 22 VGEKLVLNCTARTELNVGIDFNWEYPSSKHQHKKLVNRDLKTQSGSEMKKFLSTLTIDGVTRSDQGLYTCAASSGLMTKK 101 (122)
T ss_dssp ETCCEEEEEEEEECTTCCCEEEEECSCTTCCHHHHBCCSCCEEEETTEEEEEEEEEESSCCGGGCEEEEEEEECSSCEEE
T ss_pred cCCeEEEEEEEEcCCCCcEEEEEECCCcccCCceeeeeccccccCCceeeEEEEEEECCCCcccCEEEEEEEccCCCceE
Confidence 38999999999884 4568999998874321 0 124699999999999999999999887766
Q ss_pred eEeeEEEeeecCCCeeeec
Q psy12725 62 ASGELKLGGRFDPPVIKES 80 (119)
Q Consensus 62 ~~~~~~v~~~~~~~~~~~~ 80 (119)
....+.|.. +|.+...
T Consensus 102 ~~~~l~V~~---~p~i~~~ 117 (122)
T 3s35_X 102 NSTFVRVHE---KPFVAFG 117 (122)
T ss_dssp EEEEEEEEE---EECC---
T ss_pred EEEEEEEec---cCeEEee
Confidence 666666643 4554443
No 275
>2edn_A Myosin-binding protein C, fast-type; beta-sandwich, IG-fold, fast MYBP-C, C-protein, skeletal muscle fast isoform, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.52 E-value=1.6e-14 Score=74.13 Aligned_cols=69 Identities=16% Similarity=0.211 Sum_probs=53.9
Q ss_pred CCccEEEEEEeccC---CCCeeEEeeCCc---------cCCCC---------CCCeEEEecCCCCCCeEEEEEEEcCCCC
Q psy12725 1 MLALKFFTCKYEGN---PVKTISWMKDGK---------PVPDH---------NEPVFRIDSVRKEDKGMYQCVIRNEQES 59 (119)
Q Consensus 1 ~g~~~~l~c~~~~~---~~~~v~w~~~~~---------~~~~~---------~~~~l~~~~~~~~d~g~y~C~~~~~~~~ 59 (119)
.|+.++|.|.+.+. |.|.|.|||+.. .+... ....|.|.++...|.|.|.|++.+..+.
T Consensus 26 eG~~v~L~C~v~g~~~~p~P~V~W~Kgk~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~Cevsn~~g~ 105 (118)
T 2edn_A 26 TGKDAVVVAKVNGKELPDKPTIKWFKGKWLELGSKSGARFSFKESHNSASNVYTVELHIGKVVLGDRGYYRLEVKAKDTC 105 (118)
T ss_dssp TTSCEECCEEEETTTSSSCCCCEEEETTTCCCCCSTTSSCEEEEEECSSSCEEEEEEEESSCCTTTCSCEEEEEECSSCE
T ss_pred CCCCEEEEEEEeccCCCCCCcEEEeeCCEeccCCCCccEEEeccccccccccceEEEEEeeCChhhCEEEEEEEEEcCCc
Confidence 38999999999875 688999999741 11110 1367999999999999999999999887
Q ss_pred ceeEeeEEEe
Q psy12725 60 AQASGELKLG 69 (119)
Q Consensus 60 ~~~~~~~~v~ 69 (119)
......+.|.
T Consensus 106 ~s~~~~L~V~ 115 (118)
T 2edn_A 106 DSCGFNIDVE 115 (118)
T ss_dssp EEEEECCEEE
T ss_pred EEEEEEEEEE
Confidence 7667777764
No 276
>2yuz_A Myosin-binding protein C, SLOW-type; immunoglobulin domain, SLOW-type myosin-binding protein C, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.51 E-value=8.3e-14 Score=69.76 Aligned_cols=65 Identities=17% Similarity=0.251 Sum_probs=51.2
Q ss_pred CCccEEEEEEeccCCCCeeEEeeCCccCCCCC---------CCeEEEecCCCCCCeEEEEEEEcCCCCceeEeeEEEe
Q psy12725 1 MLALKFFTCKYEGNPVKTISWMKDGKPVPDHN---------EPVFRIDSVRKEDKGMYQCVIRNEQESAQASGELKLG 69 (119)
Q Consensus 1 ~g~~~~l~c~~~~~~~~~v~w~~~~~~~~~~~---------~~~l~~~~~~~~d~g~y~C~~~~~~~~~~~~~~~~v~ 69 (119)
.|+.+.|.|.+ .|.+.+.|+|++..+.... ...|.|.+++.+|.|.|.|.+.|. .......+.|.
T Consensus 21 ~G~~v~l~C~v--~p~p~v~W~k~g~~l~~~~r~~i~~~~~~~~L~I~~v~~~D~G~Y~C~a~N~--~~~~~a~L~V~ 94 (100)
T 2yuz_A 21 LGKEICLKCEI--SENIPGKWTKNGLPVQESDRLKVVQKGRIHKLVIANALTEDEGDYVFAPDAY--NVTLPAKVHVI 94 (100)
T ss_dssp TTSCCCEEEEC--SSCCCEEEEETTEECCCCSSEEEEECSSEEEEEESSCCGGGCSEEEEEESSS--CCCEEEEEEEE
T ss_pred CCCCEEEEEEe--CCCCeEEEEECCEECCCCCcEEEEEeCCEEEEEECCCChhhCEEEEEEEcCC--CeeEEEEEEEe
Confidence 48899999999 6888999999998875432 136999999999999999999997 33344555553
No 277
>3u2s_H PG9 heavy chain; greek KEY, immunoglobulin, immune recognition, immune system; HET: PCA TYS BU3 NAG BMA MAN; 1.80A {Homo sapiens} PDB: 3u4e_H* 3u36_H 3mug_B* 3lrs_H* 3mme_H* 2qsc_H*
Probab=99.51 E-value=6e-14 Score=80.74 Aligned_cols=113 Identities=15% Similarity=0.286 Sum_probs=68.7
Q ss_pred CCccEEEEEEeccC--CCCeeEEeeCC--cc---C---C-----------C-----------CCCCeEEEecCCCCCCeE
Q psy12725 1 MLALKFFTCKYEGN--PVKTISWMKDG--KP---V---P-----------D-----------HNEPVFRIDSVRKEDKGM 48 (119)
Q Consensus 1 ~g~~~~l~c~~~~~--~~~~v~w~~~~--~~---~---~-----------~-----------~~~~~l~~~~~~~~d~g~ 48 (119)
.|+.|+|.|.+.+. +...+.|||.. .. + . . ....+|.|.+++.+|+|.
T Consensus 13 ~G~~v~L~C~~s~~~~~~~~v~W~rq~~~~~~~~l~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~sL~I~~v~~~DsG~ 92 (248)
T 3u2s_H 13 PGSSLRLSCAASGFDFSRQGMHWVRQAPGQGLEWVAFIKYDGSEKYHADSVWGRLSISRDNSKDTLYLQMNSLRVEDTAT 92 (248)
T ss_dssp TTCCEEEEEEEESSCGGGSCEEEEEECTTSCEEEEEEECTTSSCEEECTTTTTTEEEEEEGGGTEEEEEECSCCGGGCEE
T ss_pred CCCCEEEEEEeccccCCccEEEEEEECCCCCcEEEEEEecCCCceecCcccCCcEEEEecCCCCEEEEEECCCCHHHCEE
Confidence 48999999999752 34679999732 11 0 0 0 011348999999999999
Q ss_pred EEEEEEcCC----------------------CCceeEeeEEEee-ecCCCeeeecCCccccCCCCcEEEEeEEccC-C-C
Q psy12725 49 YQCVIRNEQ----------------------ESAQASGELKLGG-RFDPPVIKESFSDETLNPGPNYYFKCIASGN-P-T 103 (119)
Q Consensus 49 y~C~~~~~~----------------------~~~~~~~~~~v~~-~~~~~~~~~~~~~~~~~~g~~~~l~C~~~~~-p-~ 103 (119)
|.|.+.+.. ........+.+.. ...+|.+........+..|+.+.|.|.+.+. | .
T Consensus 93 Y~C~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~l~V~~~~~~~P~v~~~~~~~~~~~g~~~~L~C~~~~~~P~~ 172 (248)
T 3u2s_H 93 YFCVREAGGPDYRNGYNYYDFYDGYYNYHYMDVWGKGTTVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEP 172 (248)
T ss_dssp EEEEEEEEECEEETTEEEECGGGCCEEEEEEEEECCCEEEEECSCCCBCCEEEEECCC------CEEEEEEEEEEEBSSC
T ss_pred EEEEEeCCCCccccccccccccccccccccceeeCCCEEEEEcccCCCCCEEEEeCCCccccCCCcEEEEEEEeeEECCC
Confidence 999987631 0111123344431 1234555544444445678999999999875 4 3
Q ss_pred CeEEEEECCE
Q psy12725 104 PEISWYLDGK 113 (119)
Q Consensus 104 ~~~~W~~~~~ 113 (119)
..+.|++++.
T Consensus 173 ~~v~W~~~g~ 182 (248)
T 3u2s_H 173 VTVSWNSGAL 182 (248)
T ss_dssp CEEEEGGGTB
T ss_pred eEEEEeECCc
Confidence 4699999875
No 278
>4hwu_A Fibroblast growth factor receptor 2; FGFR2, KGFR, CD332, IG-C2 type 1 domain, IG superfamily, IMM system, structural genomics, PSI-biology; 2.90A {Mus musculus}
Probab=99.51 E-value=1.5e-13 Score=68.10 Aligned_cols=66 Identities=21% Similarity=0.341 Sum_probs=53.0
Q ss_pred CCccEEEEEEeccCCCCeeEEeeCCccCCCCC-----CCeEEEecCCCCCCeEEEEEEEcCCCCceeEeeEEE
Q psy12725 1 MLALKFFTCKYEGNPVKTISWMKDGKPVPDHN-----EPVFRIDSVRKEDKGMYQCVIRNEQESAQASGELKL 68 (119)
Q Consensus 1 ~g~~~~l~c~~~~~~~~~v~w~~~~~~~~~~~-----~~~l~~~~~~~~d~g~y~C~~~~~~~~~~~~~~~~v 68 (119)
.|+.+.|.|.+.+ .+.+.|++++..+.... ...|.|.+++.+|.|.|.|.+.|..+.......+.+
T Consensus 15 ~G~~~~l~C~~~~--~p~v~W~k~g~~~~~~~~~~~~~~~L~i~~~~~~D~G~Y~C~a~n~~g~~~~~~~l~V 85 (95)
T 4hwu_A 15 PGESLELQCMLKD--AAVISWTKDGVHLGPNNRTVLIGEYLQIKGATPRDSGLYACTAARTVDSETWIFMVNV 85 (95)
T ss_dssp TTSCEEEECCCCT--TCEEEEEETTEEECCCSSEEEETTEEEECSCCGGGCEEEEEEEECSSCEEEEEEEEEE
T ss_pred CCCEEEEEEEeCC--CCEEEEEECCEECCCCceEEEeCCEEEECcCCcccCEEEEEEEccCCCcEEEEEEEEE
Confidence 4899999999986 47999999998775432 467999999999999999999998765555555554
No 279
>2lvc_A Obscurin-like protein 1; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative, structural prote; NMR {Homo sapiens}
Probab=99.51 E-value=1e-13 Score=68.25 Aligned_cols=55 Identities=22% Similarity=0.514 Sum_probs=45.9
Q ss_pred CCccEEEEEEeccCCCCeeEEeeCCccCCCCC---------CCeEEEecCCCCCCeEEEEEEEcC
Q psy12725 1 MLALKFFTCKYEGNPVKTISWMKDGKPVPDHN---------EPVFRIDSVRKEDKGMYQCVIRNE 56 (119)
Q Consensus 1 ~g~~~~l~c~~~~~~~~~v~w~~~~~~~~~~~---------~~~l~~~~~~~~d~g~y~C~~~~~ 56 (119)
.|+.+.|.|.+.+ |.+.+.|+||++.+.... ...|.|.+++.+|.|.|.|.+.|.
T Consensus 20 ~g~~v~l~C~v~~-p~~~v~W~k~g~~i~~~~~~~i~~~~~~~~L~I~~v~~~D~G~Y~C~a~n~ 83 (91)
T 2lvc_A 20 TSECVMLACEVDR-EDAPVRWYKDGQEVEESDFVVLENEGPHRRLVLPATQPSDGGEFQCVAGDE 83 (91)
T ss_dssp TTCCEEEEEECSC-TTSCCEEEETTSCCCCCSSCEEEEETTEEEEEESSCCGGGCSEEEEECSSC
T ss_pred CCCcEEEEEEECC-CCcEEEEEECCEEeeeeeeeeEEecCCeEEEEeCCCChhhcEEEEEEEcce
Confidence 3899999999965 888999999998876432 236999999999999999998654
No 280
>1wwc_A Protein (NT-3 growth factor receptor TRKC); TRK receptor, receptor tyrosine kinase, 3D-domain swapping, transferase; 1.90A {Homo sapiens} SCOP: b.1.1.4
Probab=99.49 E-value=1.5e-13 Score=70.72 Aligned_cols=66 Identities=18% Similarity=0.380 Sum_probs=52.9
Q ss_pred ccEEEEEEeccCCCCeeEEeeCCccCCCCC-------------CCeEEEecCCCCCCeEEEEEEEcCCCCceeEeeEEE
Q psy12725 3 ALKFFTCKYEGNPVKTISWMKDGKPVPDHN-------------EPVFRIDSVRKEDKGMYQCVIRNEQESAQASGELKL 68 (119)
Q Consensus 3 ~~~~l~c~~~~~~~~~v~w~~~~~~~~~~~-------------~~~l~~~~~~~~d~g~y~C~~~~~~~~~~~~~~~~v 68 (119)
+...|.|.+.|.|.+.+.|+|++..+.... ...|.|.+++..|.|.|.|.+.|..+.......+.+
T Consensus 21 ~~~~l~C~~~g~P~p~i~W~k~g~~l~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~N~~G~~~~~~~l~v 99 (118)
T 1wwc_A 21 LEHCIEFVVRGNPPPTLHWLHNGQPLRESKIIHVEYYQEGEISEGCLLFNKPTHYNNGNYTLIAKNPLGTANQTINGHF 99 (118)
T ss_dssp CEEEEEEEEECSSCCEEEEEETTEECCCSSSEEEEEEECSSEEEEEEEEESCCGGGCEEEEEEEEETTEEEEEEEEECC
T ss_pred cceEEEEEeeeeCCCeEEEEECCEECCCCCceeEEEeccCccccEEEEECCCChhcCEEEEEEEECCCCeEeeEEEEEE
Confidence 456789999999999999999998875432 246899999999999999999998766555554443
No 281
>3rbs_A Myomesin-1; immunoglobulin C-SET domain, contractIle protein; 1.85A {Homo sapiens}
Probab=99.49 E-value=7.7e-14 Score=78.32 Aligned_cols=66 Identities=18% Similarity=0.367 Sum_probs=53.9
Q ss_pred CCccEEEEEEeccC-CCCeeEEeeCCccCCCC-------CCCeEEEecCCCCCCeEEEEEEEcCCCCceeEeeE
Q psy12725 1 MLALKFFTCKYEGN-PVKTISWMKDGKPVPDH-------NEPVFRIDSVRKEDKGMYQCVIRNEQESAQASGEL 66 (119)
Q Consensus 1 ~g~~~~l~c~~~~~-~~~~v~w~~~~~~~~~~-------~~~~l~~~~~~~~d~g~y~C~~~~~~~~~~~~~~~ 66 (119)
.|+.+.|.|.+.+. |.+.+.|+|++..+... ....|.|.+++.+|.|.|+|.+.|..+.......+
T Consensus 130 ~g~~v~l~C~v~g~~P~p~i~W~k~g~~l~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~N~~G~~~~~~~L 203 (207)
T 3rbs_A 130 GECNVLLKCKVANIKKETHIVWYKDEREISVDEKHDFKDGICTLLITEFSKKDAGIYEVILKDDRGKDKSRLKL 203 (207)
T ss_dssp TTTEEEEEEEEESCCTTCEEEEEETTEEECCCCCCCCSSEEEEEEETTCCGGGCEEEEEEEEETTEEEEEEEEE
T ss_pred CCCcEEEEEEEeCCCCCCEEEEEECCEECCCCCceEcCCCEEEEEECCCCcccCEEEEEEEEcCCCEEEEEEEE
Confidence 37889999999998 89999999999877432 12359999999999999999999987765555444
No 282
>1x44_A Myosin-binding protein C, SLOW-type; IG-like domain, SLOW- type/skeletal muscle SLOW-isoform, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.1.1.4
Probab=99.48 E-value=4e-13 Score=67.46 Aligned_cols=64 Identities=17% Similarity=0.338 Sum_probs=50.0
Q ss_pred CCccEEEEEEeccCCCCeeEEeeCCccCCCCCC-----------CeEEEecCCCCCCeEEEEEEEcCCCCceeEeeEEEe
Q psy12725 1 MLALKFFTCKYEGNPVKTISWMKDGKPVPDHNE-----------PVFRIDSVRKEDKGMYQCVIRNEQESAQASGELKLG 69 (119)
Q Consensus 1 ~g~~~~l~c~~~~~~~~~v~w~~~~~~~~~~~~-----------~~l~~~~~~~~d~g~y~C~~~~~~~~~~~~~~~~v~ 69 (119)
.|+.+.|.|.+.+ +.+.+.|+|++..+..... ..|.|.+++.+|.|.|.|.+.| ......+.|.
T Consensus 21 ~G~~v~l~C~~~~-~~~~v~W~k~g~~l~~~~~~~~~~~~~~~~~~L~I~~~~~~D~G~Y~C~a~n----~~~~~~l~V~ 95 (103)
T 1x44_A 21 CGERVELECEVSE-DDANVKWFKNGEEIIPGPKSRYRIRVEGKKHILIIEGATKADAAEYSVMTTG----GQSSAKLSVD 95 (103)
T ss_dssp TTEEEEEEEECSS-SSCCCEEEETTEECCCSTTCSEEEEEETTEEEEEEEEECTTTCSEEEEEETT----EEEEEEEEEE
T ss_pred CCCCEEEEEEecC-CCCeEEEEECCEECCCCCceEEEEEEcCCEEEEEECCCCcccCEEEEEEECC----CcEEEEEEEe
Confidence 4889999999977 6689999999987754331 4689999999999999999976 2334445543
No 283
>3so5_A LIG-3, leucine-rich repeats and immunoglobulin-like DOMA protein 3; structural genomics, joint center for struct genomics, JCSG; HET: MLY MSE; 1.70A {Mus musculus}
Probab=99.45 E-value=4.1e-13 Score=68.02 Aligned_cols=59 Identities=29% Similarity=0.475 Sum_probs=48.3
Q ss_pred CCccEEEEEEeccC--CCCeeEEeeCCccCCCCC-----------------CCeEEEecCCCCCCeEEEEEEEcCCCC
Q psy12725 1 MLALKFFTCKYEGN--PVKTISWMKDGKPVPDHN-----------------EPVFRIDSVRKEDKGMYQCVIRNEQES 59 (119)
Q Consensus 1 ~g~~~~l~c~~~~~--~~~~v~w~~~~~~~~~~~-----------------~~~l~~~~~~~~d~g~y~C~~~~~~~~ 59 (119)
.|+.+.|.|.+.+. +.+.+.|++++..+.... ...|.|.+++..|.|.|.|.+.|..+.
T Consensus 24 ~G~~v~L~C~~~~~~~~~~~i~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~n~~g~ 101 (112)
T 3so5_A 24 XGSDVSFTCSAASSSDSPMTFAWXXDNEALQDAEMENYAHLRAQGGELMEYTTILRLRNVEFTSEGXYQCVISNHFGS 101 (112)
T ss_dssp TTCCEEEEEEEEESCCCCCEEEEEETTEECTTCEEEEEEETTGGGSSCEEEEEEEEECSCCGGGCEEEEEEEEETTEE
T ss_pred CCCCEEEEEEEecCCCCCEEEEEccCCcccccccccceeeeeccCCCccccceEEEEeccccccCCeEEEEEEeCCCc
Confidence 48999999999855 457999999987765321 257999999999999999999998654
No 284
>1waa_A Titin; metal binding protein, calmodulin-binding, cytoskeleton, immunoglobulin domain, muscle protein, phosphorylation, repeat; 1.80A {Homo sapiens} PDB: 1waa_E 1waa_F 1tit_A 1tiu_A 2rq8_A
Probab=99.44 E-value=7.9e-13 Score=65.33 Aligned_cols=55 Identities=13% Similarity=0.208 Sum_probs=45.7
Q ss_pred CCccEEEEEEeccCCCCeeEEeeCCccCCCCC---------CCeEEEecCCCCCCeEEEEEEEcC
Q psy12725 1 MLALKFFTCKYEGNPVKTISWMKDGKPVPDHN---------EPVFRIDSVRKEDKGMYQCVIRNE 56 (119)
Q Consensus 1 ~g~~~~l~c~~~~~~~~~v~w~~~~~~~~~~~---------~~~l~~~~~~~~d~g~y~C~~~~~ 56 (119)
.|+.+.|.|.+.+ +.+.+.|+|++..+.... ...|.|.+++.+|.|.|.|.+.|.
T Consensus 19 ~G~~v~l~C~v~~-~~~~v~W~k~g~~i~~~~~~~i~~~g~~~~L~I~~v~~~D~G~Y~C~a~n~ 82 (93)
T 1waa_A 19 VGETAHFEIELSE-PDVHGQWKLKGQPLAASPDCEIIEDGKKHILILHNCQLGMTGEVSFQAANT 82 (93)
T ss_dssp TTSCEEEEEEESS-SSCCCEEEETTEECCCBTTEEEEEETTEEEEEECSCCGGGCEEEEEEETTE
T ss_pred CCCCEEEEEEECC-CCCeEEEEECCEECcCCCCEEEEEECCEEEEEECCCChhhCEEEEEEECCC
Confidence 4899999999976 557899999998875422 237999999999999999999774
No 285
>2e6p_A Obscurin-like protein 1; IG-like domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.44 E-value=3e-13 Score=67.99 Aligned_cols=55 Identities=18% Similarity=0.420 Sum_probs=46.8
Q ss_pred CCccEEEEEEeccCCCCeeEEeeCCccCCCC---------CCCeEEEecCCCCCCeEEEEEEEcC
Q psy12725 1 MLALKFFTCKYEGNPVKTISWMKDGKPVPDH---------NEPVFRIDSVRKEDKGMYQCVIRNE 56 (119)
Q Consensus 1 ~g~~~~l~c~~~~~~~~~v~w~~~~~~~~~~---------~~~~l~~~~~~~~d~g~y~C~~~~~ 56 (119)
.|+.+.|.|.+.+.+.+ +.|+|++..+... ....|.|.+++.+|.|.|.|.+.|.
T Consensus 24 ~G~~v~l~C~~~~~p~~-v~W~k~g~~~~~~~~~~~~~~~~~~~L~I~~~~~~D~G~Y~C~a~n~ 87 (104)
T 2e6p_A 24 TSERVVLTCELSRVDFP-ATWYKDGQKVEESELLVVKMDGRKHRLILPEAKVQDSGEFECRTEGV 87 (104)
T ss_dssp SSSCEECCEECSSTTCC-CEEEETTEECCCBTTBEEEEETTEEEEEESSCCTTTCEEEEEECSSC
T ss_pred CCCcEEEEEEecCCCCc-cEEeeCCEECCCCCCEEEEeCCCEEEEEECCCChhhCEEEEEEECCc
Confidence 38999999999988887 9999999877542 1246999999999999999999886
No 286
>1iam_A ICAM-1, CD54, intercellular adhesion molecule-1; rhinovirus receptor, cell adhesion, integrin ligand, glycopr LFA-1 ligand, immunoglobulin fold; HET: NAG; 2.10A {Homo sapiens} SCOP: b.1.1.3 b.1.1.4 PDB: 1ic1_A* 1d3l_A 1d3e_I 1d3i_I 3tcx_A
Probab=99.44 E-value=6.9e-12 Score=69.15 Aligned_cols=112 Identities=15% Similarity=0.210 Sum_probs=74.6
Q ss_pred CCccEEEEEEeccCCCCe-eEEee--CCccC-CC-CCCCeEEEecCCCCCCeEEEEEEEcCCCCceeEeeEEEeeecCCC
Q psy12725 1 MLALKFFTCKYEGNPVKT-ISWMK--DGKPV-PD-HNEPVFRIDSVRKEDKGMYQCVIRNEQESAQASGELKLGGRFDPP 75 (119)
Q Consensus 1 ~g~~~~l~c~~~~~~~~~-v~w~~--~~~~~-~~-~~~~~l~~~~~~~~d~g~y~C~~~~~~~~~~~~~~~~v~~~~~~~ 75 (119)
+|+++.|.|.+.. +.+. +.|.. +...+ .. .....+.+.+++. | |.|.|.+............+.+ ...|.
T Consensus 13 ~G~Sv~l~Cs~~c-~~p~~~~~~t~l~~~~~~~~~~~~~~l~l~~vs~-~-g~y~C~~~c~~~~~~~~~~l~V--~~~P~ 87 (185)
T 1iam_A 13 RGGSVLVTCSTSC-DQPKLLGIETPLPKKELLLPGNNRKVYELSNVQE-D-SQPMCYSNCPDGQSTAKTFLTV--YWTPE 87 (185)
T ss_dssp TTEEEEEEEEECS-SSCSEEEEECSSCEEEECSSSSSEEEEEEEEECS-C-BCCEEEEECSSCEEEEECEEEE--EBCCS
T ss_pred CCCCEEEEEEccC-CCCccceEEeeCCCccEeccCCceeEEEEEecCc-C-CEEEEEEECCCCceEEEEEEEE--eCCCC
Confidence 4999999999964 5454 66742 11111 11 2234678888873 3 8999998765443444444444 34455
Q ss_pred eeeecCCccccCCCCcEEEEeEEccC-CCC--eEEEEECCEEccc
Q psy12725 76 VIKESFSDETLNPGPNYYFKCIASGN-PTP--EISWYLDGKKLVN 117 (119)
Q Consensus 76 ~~~~~~~~~~~~~g~~~~l~C~~~~~-p~~--~~~W~~~~~~~~~ 117 (119)
.+.+.+....+.+|+.++|.|.+.+. |.. .+.|+++++.+..
T Consensus 88 ~v~i~~~~~~~~~G~~~tL~C~v~g~~P~~~l~i~w~kg~~~l~~ 132 (185)
T 1iam_A 88 RVELAPLPSWQPVGKQLTLRCQVEGGAPRAQLTVVLLRGEKELKR 132 (185)
T ss_dssp EEEECCCCSEECTTSEEEEEEEEECCBCGGGEEEEEEETTEEEEE
T ss_pred CCEEccCCccccCCCcEEEEEEcCCccCCCCcEEEEEeCCEEccc
Confidence 66666655568999999999999875 443 4899999998753
No 287
>3qr2_A Basigin; CD147, EMMPRIN, immunoglobulin-like domain, beta sheet, STRU genomics, berkeley structural genomics center, BSGC, cell A; 2.30A {Homo sapiens} PDB: 3qqn_A
Probab=99.44 E-value=3.1e-13 Score=71.17 Aligned_cols=60 Identities=27% Similarity=0.524 Sum_probs=49.8
Q ss_pred CCccEEEEEEeccCCCCeeEEeeCCccCCCC----------------------CCCeEEEecCCCCCCeEEEEEEEcCCC
Q psy12725 1 MLALKFFTCKYEGNPVKTISWMKDGKPVPDH----------------------NEPVFRIDSVRKEDKGMYQCVIRNEQE 58 (119)
Q Consensus 1 ~g~~~~l~c~~~~~~~~~v~w~~~~~~~~~~----------------------~~~~l~~~~~~~~d~g~y~C~~~~~~~ 58 (119)
.|+.+.|.|.+.+.|.+.+.|++++..+... ....|.|.+++.+|.|.|.|.+.|..+
T Consensus 35 ~G~~v~L~C~~~g~P~p~i~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~N~~G 114 (137)
T 3qr2_A 35 VGGSVELHCEAVGSPVPEIQWWFEGQGPNDICSQLWDGARLDRVHIHATYHQHAASTISIDTLVEEDTGTYECRASNDPD 114 (137)
T ss_dssp TTSCEEEEEEEECSSCCEEEEEEEESSTTCCCEECCTTHHHHTEEEEEEESSSEEEEEEECSCCGGGCEEEEEEEECCTT
T ss_pred CCCCEEEEEEEeeecCCeEEEEECCCCccccceeecccCcccceEEecccccccceEEEECCCCcccCEEEEEEEEecCC
Confidence 4899999999999999999999977654211 235799999999999999999999876
Q ss_pred Cc
Q psy12725 59 SA 60 (119)
Q Consensus 59 ~~ 60 (119)
..
T Consensus 115 ~~ 116 (137)
T 3qr2_A 115 RN 116 (137)
T ss_dssp SS
T ss_pred cc
Confidence 54
No 288
>2dlt_A Myosin binding protein C, fast-type; IG-like domain, mybpc2, structural genomics, NPPSFA; NMR {Mus musculus}
Probab=99.43 E-value=6.3e-13 Score=67.08 Aligned_cols=65 Identities=28% Similarity=0.405 Sum_probs=50.7
Q ss_pred CCccEEEEEEeccCCCCeeEEeeCCccCCCCC---------CCeEEEecCCCCCCeEEEEEEEcCCCCceeEeeEEE
Q psy12725 1 MLALKFFTCKYEGNPVKTISWMKDGKPVPDHN---------EPVFRIDSVRKEDKGMYQCVIRNEQESAQASGELKL 68 (119)
Q Consensus 1 ~g~~~~l~c~~~~~~~~~v~w~~~~~~~~~~~---------~~~l~~~~~~~~d~g~y~C~~~~~~~~~~~~~~~~v 68 (119)
.|+.+.|.|.+.+.+.+ +.|+|++..+.... ...|.|.+++.+|.|.|.|.+.|. .......+.+
T Consensus 22 ~G~~v~l~C~~~~~~~~-v~W~k~g~~~~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~n~--~~~~~~~l~V 95 (106)
T 2dlt_A 22 AAEQAVFKCEVSDEKVT-GKWYKNGVEVRPSKRITISHVGRFHKLVIDDVRPEDEGDYTFVPDGY--ALSLSAKLNF 95 (106)
T ss_dssp SSCCEECCCEESCSSCE-EEEEESSCBCCCCSSCEEEEETTEEEEEESSCCTTTCSCEEEEEETS--CCCCCBCEEE
T ss_pred CCCeEEEEEEEcCCCcc-eEEEcCCEECcCCCCEEEEEeCCEEEEEECCCCcCCCEEEEEEEccC--CceEEEEEEE
Confidence 48999999999987766 99999998775432 137999999999999999999997 2333444444
No 289
>3n9g_H FAB fragment of MAB CR4354, heavy chain; human neutralizing antibody, immun anti-WEST NIle virus; 1.43A {Homo sapiens} PDB: 3iyw_H 3qeh_A 3sqo_H 4hk0_A 4hk3_J 4hkx_A* 3u0t_D 3c08_H 3lmj_H 3lqa_H* 3c09_H* 4dn3_H 3pp4_H 3pp3_H 4hkb_J 2jb5_H* 2jb6_B* 2eh7_H 2eh8_H 3jwd_H* ...
Probab=99.43 E-value=2.2e-12 Score=73.36 Aligned_cols=108 Identities=16% Similarity=0.291 Sum_probs=68.6
Q ss_pred CCccEEEEEEeccC--CCCeeEEeeCC--cc---C----------------CC---------CCCCeEEEecCCCCCCeE
Q psy12725 1 MLALKFFTCKYEGN--PVKTISWMKDG--KP---V----------------PD---------HNEPVFRIDSVRKEDKGM 48 (119)
Q Consensus 1 ~g~~~~l~c~~~~~--~~~~v~w~~~~--~~---~----------------~~---------~~~~~l~~~~~~~~d~g~ 48 (119)
.|+.|+|.|.+.+. ....+.|||.. .. + .. .....|.|.+++.+|+|.
T Consensus 14 ~G~~v~L~C~~~~~~~~~~~v~W~rq~~~~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~sL~I~~v~~~DsG~ 93 (230)
T 3n9g_H 14 PGASTKVSCKASGYTFTHYYMHWVRQAPGQGLEWMGIINPSGGSTTYAQKLQGRVTMTRDTSTSTVYMELSSLRSEDTAV 93 (230)
T ss_dssp TTCCEEEEEEEESSCGGGSCEEEEEECTTSCEEEEEEECTTTCCEEECGGGTTTEEEEEETTTTEEEEEECSCCGGGCEE
T ss_pred CCCCEEEEEEeecceecCcEEEEEEECCCCCcEEEEEEecCCCceecCcccCCcEEEEecCCCCEEEEEECCCChhhCEE
Confidence 48999999999652 34579999732 11 0 00 011349999999999999
Q ss_pred EEEEEEcCCC-----C---ceeEeeEEEeee-cCCCeeeecCCccccCCCCcEEEEeEEccC-C-CCeEEE
Q psy12725 49 YQCVIRNEQE-----S---AQASGELKLGGR-FDPPVIKESFSDETLNPGPNYYFKCIASGN-P-TPEISW 108 (119)
Q Consensus 49 y~C~~~~~~~-----~---~~~~~~~~v~~~-~~~~~~~~~~~~~~~~~g~~~~l~C~~~~~-p-~~~~~W 108 (119)
|.|.+.+... . ......+.|... ..+|.+........+..|+.+.|.|.+.+. | .+.+.|
T Consensus 94 Y~C~~~~~~~~~~~~~~~~~~~~~~l~V~~~~~~~P~v~~~~~~~~~~~g~~v~L~C~~~~~~P~~~~v~W 164 (230)
T 3n9g_H 94 YYCARDWGSNYVWGSYPKYWGQGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSW 164 (230)
T ss_dssp EEEEEECCCSSSTTCCEEEECCCEEEEECSSCCBCCEEEEECCCCCCCTTCEEEEEEEEEEEBSSCCEEEE
T ss_pred EEEEEccCCCCcccccccccCCCEEEEEEecCCCCCEEEecCCCccccCCCCEEEEEEEEeEECCCEEEEE
Confidence 9999987531 1 112233444311 234555543444445689999999999875 4 236899
No 290
>2v5t_A NCAM2, N-CAM 2, neural cell adhesion molecule 2; phosphorylation, immunoglobulin domain, membrane, glycoprote adhesion, transmembrane; HET: NAG; 2.00A {Homo sapiens}
Probab=99.43 E-value=1e-12 Score=72.20 Aligned_cols=68 Identities=22% Similarity=0.481 Sum_probs=56.9
Q ss_pred CccEEEEEEeccCCCCeeEEeeCCccCCCC-------CCCeEEEecCCCCCCeEEEEEEEcCCCCceeEeeEEEe
Q psy12725 2 LALKFFTCKYEGNPVKTISWMKDGKPVPDH-------NEPVFRIDSVRKEDKGMYQCVIRNEQESAQASGELKLG 69 (119)
Q Consensus 2 g~~~~l~c~~~~~~~~~v~w~~~~~~~~~~-------~~~~l~~~~~~~~d~g~y~C~~~~~~~~~~~~~~~~v~ 69 (119)
|+.+.|.|.+.+.|.+.+.|++++..+... ....|.|..+..+|.|.|.|.+.|..+.......+.|.
T Consensus 113 g~~v~l~C~~~g~p~~~v~W~~~g~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~l~V~ 187 (189)
T 2v5t_A 113 GEEMTFSCRASGSPEPAISWFRNGKLIEENEKYILKGSNTELTVRNIINSDGGPYVCRATNKAGEDEKQAFLQVF 187 (189)
T ss_dssp CCCEEEECEEEEESCCEEEEEETTEECCCSSSEEEETTTTEEEECSCCGGGCEEEEEEEEETTEEEEEEEEEEEE
T ss_pred CCcEEEEEEEccCCCCeEEEEECCEECcCCCcEEEecCCCEEEEcCCChhhCeeEEEEEEeCCCceeEEEEEEEE
Confidence 889999999998898999999999877542 35679999999999999999999987766666655553
No 291
>3r08_E T-cell surface glycoprotein CD3 epsilon chain; antibody, T-cell receptor, signalling, immune SY; 4.10A {Cricetulus migratorius}
Probab=99.43 E-value=7.8e-14 Score=67.03 Aligned_cols=52 Identities=21% Similarity=0.528 Sum_probs=45.4
Q ss_pred CccEEEEEEeccCCCCeeEEeeCCccCCCCCCCeEEEecC-CCCCCeEEEEEEEc
Q psy12725 2 LALKFFTCKYEGNPVKTISWMKDGKPVPDHNEPVFRIDSV-RKEDKGMYQCVIRN 55 (119)
Q Consensus 2 g~~~~l~c~~~~~~~~~v~w~~~~~~~~~~~~~~l~~~~~-~~~d~g~y~C~~~~ 55 (119)
|++|+|.|.+.+.| .|+|+|++..+....+..|.|.++ ..+|+|.|.|.+..
T Consensus 14 G~~v~L~C~~~g~P--~i~W~kdg~~l~~~~~~~L~I~~v~~~~DsG~Y~C~A~t 66 (82)
T 3r08_E 14 GTSVELTCPLDSDE--NLKWEKNGQELPQKHDKHLVLQDFSEVEDSGYYVCYTPA 66 (82)
T ss_dssp TTEEEEECSSCCCS--SCEEEETTEECTTCCSSCCBCCSCCTTTTCSCEEEECSS
T ss_pred CCeEEEEEECCCCC--cEEEEECCEECcCCCCCEEEECccCccCcCEEEEEEEcc
Confidence 88999999999877 399999999887656778999996 78999999999865
No 292
>2r15_A Myomesin-1; sarcomeric protein, IG-like domains, homodimer, immunoglobul domain, muscle protein, thick filament, contractIle protein; 2.24A {Homo sapiens}
Probab=99.43 E-value=8.6e-13 Score=73.74 Aligned_cols=68 Identities=25% Similarity=0.454 Sum_probs=55.9
Q ss_pred CCccEEEEEEeccCCCCeeEEeeCCccCCCCC----------CCeEEEecCCCCCCeEEEEEEEcCCCCceeEeeEEE
Q psy12725 1 MLALKFFTCKYEGNPVKTISWMKDGKPVPDHN----------EPVFRIDSVRKEDKGMYQCVIRNEQESAQASGELKL 68 (119)
Q Consensus 1 ~g~~~~l~c~~~~~~~~~v~w~~~~~~~~~~~----------~~~l~~~~~~~~d~g~y~C~~~~~~~~~~~~~~~~v 68 (119)
.|+.+.|.|.+.+.|.+.+.|++++..+.... ...|.|.+++..|.|.|.|.+.|..+.......+.+
T Consensus 131 ~g~~~~l~C~~~g~p~p~v~W~~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~N~~g~~~~~~~l~V 208 (212)
T 2r15_A 131 EGKALNLTCNVWGDPPPEVSWLKNEKALAQTDHCNLKFEAGRTAYFTINGVSTADSGKYGLVVKNKYGSETSDFTVSV 208 (212)
T ss_dssp TTCCEEEEEEEECSSCCEEEEEETTEEECCCSSEEEEEETTTEEEEEESSCCGGGCEEEEEEEEETTEEEEEEEEEEE
T ss_pred cCCeEEEEEEEcCCCCceEEEEECCeECccCCCEEEEEcCCCEEEEEEcCcchHHCeEEEEEEEcCCCcEEEEEEEEE
Confidence 38899999999999999999999998775422 238999999999999999999998776555555554
No 293
>2nzi_A Titin; IG-domain, FNIII-domain, transferase; 2.90A {Homo sapiens}
Probab=99.43 E-value=3.9e-12 Score=74.69 Aligned_cols=69 Identities=19% Similarity=0.337 Sum_probs=56.5
Q ss_pred CccEEEEEEeccCCCCeeEEeeCCccCCCC---------CCCeEEEec-CCCCCCeEEEEEEEcCCCCceeEeeEEEee
Q psy12725 2 LALKFFTCKYEGNPVKTISWMKDGKPVPDH---------NEPVFRIDS-VRKEDKGMYQCVIRNEQESAQASGELKLGG 70 (119)
Q Consensus 2 g~~~~l~c~~~~~~~~~v~w~~~~~~~~~~---------~~~~l~~~~-~~~~d~g~y~C~~~~~~~~~~~~~~~~v~~ 70 (119)
|+.+.|.|.+.+.|.+.+.|++++..+... ....|.+.+ +...|.|.|.|.+.|..+.......+.+..
T Consensus 119 g~~~~l~C~~~g~p~p~i~W~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~~d~G~Y~C~a~N~~G~~~~~~~l~v~~ 197 (305)
T 2nzi_A 119 GEVVSIKIPFSGKPDPVITWQKGQDLIDNNGHYQVIVTRSFTSLVFPNGVERKDAGFYVVCAKNRFGIDQKTVELDVAD 197 (305)
T ss_dssp TCCEEEEEEEEEESCCEEEEEESSSBCCSSSSCEEEECSSEEEEEETTCCCSTTCEEEEEEEEETTEEEEEEEEEEEEB
T ss_pred CCEEEEEEEECCCCCCEEEEEECCEECCCCCcEEEEEcCCceEEEEecCCccCccEEEEEEEEeCCCceeeEEEEEEec
Confidence 889999999999999999999998876532 224678888 999999999999999987766666666653
No 294
>3s97_C Contactin-1; carbonic anhdyrase like immunoglobulin, cell adhesion comple adhesion; HET: NAG; 2.30A {Homo sapiens}
Probab=99.42 E-value=1.8e-12 Score=71.82 Aligned_cols=68 Identities=28% Similarity=0.509 Sum_probs=56.5
Q ss_pred CCccEEEEEEeccCCCCeeEEeeCCccCCC-----CCCCeEEEecCCCCCCeEEEEEEEcCCCCceeEeeEEE
Q psy12725 1 MLALKFFTCKYEGNPVKTISWMKDGKPVPD-----HNEPVFRIDSVRKEDKGMYQCVIRNEQESAQASGELKL 68 (119)
Q Consensus 1 ~g~~~~l~c~~~~~~~~~v~w~~~~~~~~~-----~~~~~l~~~~~~~~d~g~y~C~~~~~~~~~~~~~~~~v 68 (119)
.|+.+.|.|.+.+.|.+.+.|++++..+.. .....|.|..++..|.|.|+|.+.|..+.......+.|
T Consensus 127 ~g~~~~l~C~~~g~p~p~v~W~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~n~~g~~~~~~~l~V 199 (201)
T 3s97_C 127 MGQNVTLECFALGNPVPDIRWRKVLEPMPSTAEISTSGAVLKIFNIQLEDEGIYECEAENIRGKDKHQARIYV 199 (201)
T ss_dssp TTCCEEEEEEEEEESCCEEEEEETTBCCCTTCEEETTTTEEEECSCCGGGCEEEEEEEEETTEEEEEEEEEEE
T ss_pred cCCcEEEEEEccCCCCCceEEEeCCCcCCCceeecCCCCEEEEccCChhhCEEEEEEEEecCCceeeeEEEEE
Confidence 378999999999989999999999887653 24578999999999999999999998766655555554
No 295
>3k0w_A Mucosa-associated lymphoid tissue lymphoma translocation protein 1, isoform 2; hydrolase, immunoglobulin domain, nucleus, protease; 2.80A {Homo sapiens}
Probab=99.42 E-value=1.4e-12 Score=73.51 Aligned_cols=59 Identities=22% Similarity=0.522 Sum_probs=53.5
Q ss_pred CCccEEEEEEeccCCCCeeEEeeCCccCCCCCCCeEEEecCCCCCCeEEEEEEEcCCCC
Q psy12725 1 MLALKFFTCKYEGNPVKTISWMKDGKPVPDHNEPVFRIDSVRKEDKGMYQCVIRNEQES 59 (119)
Q Consensus 1 ~g~~~~l~c~~~~~~~~~v~w~~~~~~~~~~~~~~l~~~~~~~~d~g~y~C~~~~~~~~ 59 (119)
.|+.+.|.|.+.+.|.+.+.|++++..+.......|.|..++..|.|.|+|.+.|..+.
T Consensus 132 ~G~~v~L~C~~~g~p~~~v~W~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~n~~g~ 190 (218)
T 3k0w_A 132 PGSTLVLQCVAVGSPIPHYQWFKNELPLTHETKKLYMVPYVDLEHQGTYWCHVYNDRDS 190 (218)
T ss_dssp TTCCEEEECEEEBSSCCEEEEEETTEECTTCCSSEEEESSCCGGGCEEEEEEEECSSCE
T ss_pred CCCcEEEEEEecccCCCeEEEEECCEECCCCCCCEEEEeecChhcCEEEEEEEEcCCCC
Confidence 38899999999999999999999999987777889999999999999999999997654
No 296
>1ypz_E T cell receptor delta, beta-2-microglobulin; H2-T22 protein, T cell receptor delta, immune system; HET: NAG MAN FUC; 3.40A {Mus musculus} SCOP: b.1.1.1 b.1.1.2
Probab=99.42 E-value=4.2e-12 Score=71.20 Aligned_cols=106 Identities=15% Similarity=0.273 Sum_probs=67.0
Q ss_pred CCccEEEEEEeccCCCCeeEEeeCC--ccCC------------C----------CCCCeEEEecCCCCCCeEEEEEEEcC
Q psy12725 1 MLALKFFTCKYEGNPVKTISWMKDG--KPVP------------D----------HNEPVFRIDSVRKEDKGMYQCVIRNE 56 (119)
Q Consensus 1 ~g~~~~l~c~~~~~~~~~v~w~~~~--~~~~------------~----------~~~~~l~~~~~~~~d~g~y~C~~~~~ 56 (119)
.|+.|+|.|.+.+.. +.+.|||.. ..+. . .....|.|.+++.+|+|.|.|.+.+.
T Consensus 15 ~G~~v~L~C~~~~~~-~~v~W~r~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~~~~~ 93 (207)
T 1ypz_E 15 EGTDSALRCNFTTTM-RSVQWFRQNSRGSLISLFYLASGTKENGRLKSAFDSKERRYSTLHIRDAQLEDSGTYFCAADTW 93 (207)
T ss_dssp TTCCEEEEEEESSCC-SEEEEEEECTTSCCEEEEEESSEEEEETTEEEEECTTTCSEEEEEECSCCGGGCEEEEEEEECB
T ss_pred cCCcEEEEEEEeCCC-eEEEEEEeCCCCCeEEEEEEccCCccCCCEEEEeccCCCCEEEEEECCCCHHHCEEEEEEEecC
Confidence 489999999997644 479999843 1110 0 11247999999999999999999876
Q ss_pred CC---------C--ceeEeeEEEeee---cCCCeeeecCCccccCCCCcEEEEeEEccC-CC-CeEEEEECCEEcc
Q psy12725 57 QE---------S--AQASGELKLGGR---FDPPVIKESFSDETLNPGPNYYFKCIASGN-PT-PEISWYLDGKKLV 116 (119)
Q Consensus 57 ~~---------~--~~~~~~~~v~~~---~~~~~~~~~~~~~~~~~g~~~~l~C~~~~~-p~-~~~~W~~~~~~~~ 116 (119)
.+ . ......+.|... ..+|.+... . ..+.|.|.+.+. |. +.+.|+++ ..+.
T Consensus 94 ~~~~p~~~~~~~~~~~~~t~L~V~~~~~~~~~P~v~~~-------~-~~~~l~C~~~g~~P~~~~v~W~~~-~~l~ 160 (207)
T 1ypz_E 94 HISEGYELGTDKLVFGQGTQVTVEPKSQPPAKPSVFIM-------K-NGTNVACLVKDFYPKEVTISLRSS-KKIV 160 (207)
T ss_dssp CCCTTCCCCCCCCEECCCEEEEEECCCCCCCCCEEEEE-------E-ETTEEEEEEEEESSSCCEEEEECS-SEEE
T ss_pred CcccccccccceeeecCccEEEEccCCCCCCCCeEEEe-------C-CCCeEEEEEeeEeCCCeEEEEecC-Cccc
Confidence 31 1 112234444321 112333221 1 136899998875 44 68999998 5543
No 297
>2k1m_A Myosin-binding protein C, cardiac-type; IG-I domain, cardiac muscle, hypertrophic cardiomyopathy, actin-binding, cell adhesion, disease mutation; NMR {Homo sapiens}
Probab=99.42 E-value=3.9e-12 Score=62.93 Aligned_cols=52 Identities=15% Similarity=0.347 Sum_probs=43.8
Q ss_pred CCccEEEEEEeccCCCCeeEEeeCCccCCCCC---------CCeEEEecCCCCCCeEEEEEE
Q psy12725 1 MLALKFFTCKYEGNPVKTISWMKDGKPVPDHN---------EPVFRIDSVRKEDKGMYQCVI 53 (119)
Q Consensus 1 ~g~~~~l~c~~~~~~~~~v~w~~~~~~~~~~~---------~~~l~~~~~~~~d~g~y~C~~ 53 (119)
.|+.+.|.|.+ +.+.+.+.|+|++..+.... ...|.|.+++..|.|.|.|.+
T Consensus 22 ~G~~v~l~C~~-~~p~~~v~W~k~~~~l~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a 82 (95)
T 2k1m_A 22 AGSPAVFEAET-ERAGVKVRWQRGGSDISASNKYGLATEGTRHTLTVREVGPADQGSYAVIA 82 (95)
T ss_dssp TTSCEEEEEEC-SSSSCCCEEECSSSEECSSTTCEEEEETTEEEEEESSCCTTCCSEEEEEE
T ss_pred CCCcEEEEEEe-CCCCCeEEEEECCEECCCCCcEEEEEcCCEEEEEEcCCCcccCEEEEEEE
Confidence 38999999999 67888999999988764321 136999999999999999999
No 298
>2edf_A Obscurin; beta-sandwich, IG-fold, structural genomics, NPPSFA national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.41 E-value=9e-13 Score=66.13 Aligned_cols=64 Identities=17% Similarity=0.372 Sum_probs=50.0
Q ss_pred CCccEEEEEEeccCCCCeeEEeeCCccCCCCC---------CCeEEEecCCCCCCeEEEEEEEcCCCCceeEeeEEEe
Q psy12725 1 MLALKFFTCKYEGNPVKTISWMKDGKPVPDHN---------EPVFRIDSVRKEDKGMYQCVIRNEQESAQASGELKLG 69 (119)
Q Consensus 1 ~g~~~~l~c~~~~~~~~~v~w~~~~~~~~~~~---------~~~l~~~~~~~~d~g~y~C~~~~~~~~~~~~~~~~v~ 69 (119)
.|+.+.|.|.+.+ +.+.+.|++++..+.... ...|.|.+++.+|.|.|.|.+.|. .....+.|.
T Consensus 22 ~G~~v~l~C~~~~-~~~~v~W~k~g~~~~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~n~----~~~~~l~V~ 94 (103)
T 2edf_A 22 PGEDVELRCELSR-AGTPVHWLKDRKAIRKSQKYDVVCEGTMAMLVIRGASLKDAGEYTCEVEAS----KSTASLHVE 94 (103)
T ss_dssp TTSCEEECCEESS-SSCCCCEEESSCBCCCSSSEEEEEETTEEEEEESSCCTTTCSEEEEECSSC----EEEEEEEEC
T ss_pred CCCCEEEEEEEeC-CCCcEEEEECCEEccCCCCEEEEECCCEEEEEECCCCcccCEEEEEEEccC----CcEEEEEEe
Confidence 4899999999987 778899999998774421 236899999999999999999882 334445543
No 299
>3m45_A Cell adhesion molecule 2; IG fold, dimer, disulfide bond, glycoprotein, immunoglobulin membrane, transmembrane; HET: NAG; 2.21A {Mus musculus}
Probab=99.41 E-value=1.1e-12 Score=66.10 Aligned_cols=67 Identities=16% Similarity=0.331 Sum_probs=51.1
Q ss_pred CCccEEEEEEeccCCCCeeEEeeCCc-cCCC-----------------CCCCeEEEecCCCCCCeEEEEEEEcCCCCcee
Q psy12725 1 MLALKFFTCKYEGNPVKTISWMKDGK-PVPD-----------------HNEPVFRIDSVRKEDKGMYQCVIRNEQESAQA 62 (119)
Q Consensus 1 ~g~~~~l~c~~~~~~~~~v~w~~~~~-~~~~-----------------~~~~~l~~~~~~~~d~g~y~C~~~~~~~~~~~ 62 (119)
.|+.+.|.|.+.+.+.+.+.|++++. .+.. .....|.|.+++.+|+|.|+|.+.+ .+....
T Consensus 20 ~G~~v~L~C~~~~~~~~~v~W~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~~~n-~~~~~~ 98 (108)
T 3m45_A 20 EGGTAILTCRVDQNDNTSLQWSNPAQQTLYFDDKKALRDNRIELVRASWHELSISVSDVSLSDEGQYTCSLFT-MPVKTS 98 (108)
T ss_dssp TTSCEEEEEEESSCSSCCEEEECTTCCEEEETTEECSCCTTEEEEEESSSEEEEEECSCCGGGCEEEEEEECS-SSCEEE
T ss_pred eCCcEEEEeEEcCCCccEEEEEcCCCceEEEcCCcccccCcEEEeecCCCcEEEEECCCChhHCeEEEEEEEc-CCCcEE
Confidence 48999999999998888999998764 1100 0235799999999999999999999 555544
Q ss_pred EeeEEE
Q psy12725 63 SGELKL 68 (119)
Q Consensus 63 ~~~~~v 68 (119)
...+.|
T Consensus 99 ~~~L~V 104 (108)
T 3m45_A 99 KAYLTV 104 (108)
T ss_dssp EEEEEE
T ss_pred EEEEEE
Confidence 555554
No 300
>3rbg_A Cytotoxic and regulatory T-cell molecule; IGV, crtam, structural genomics, PSI-biology, NEW YORK struc genomics research consortium, nysgrc; 2.30A {Homo sapiens}
Probab=99.41 E-value=1.1e-12 Score=67.99 Aligned_cols=68 Identities=12% Similarity=0.223 Sum_probs=52.2
Q ss_pred CCccEEEEEEeccCCCCeeEEeeCCccCC--------C----------CCCCeEEEecCCCCCCeEEEEEEEcCCCCcee
Q psy12725 1 MLALKFFTCKYEGNPVKTISWMKDGKPVP--------D----------HNEPVFRIDSVRKEDKGMYQCVIRNEQESAQA 62 (119)
Q Consensus 1 ~g~~~~l~c~~~~~~~~~v~w~~~~~~~~--------~----------~~~~~l~~~~~~~~d~g~y~C~~~~~~~~~~~ 62 (119)
.|+.++|.|.+.+.+.+.+.|++++..+. . .....|.|.+++.+|+|.|.|.+.+. +....
T Consensus 15 ~G~~v~L~C~~~~~p~~~v~W~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~L~I~~v~~~DsG~Y~C~a~n~-g~~~~ 93 (124)
T 3rbg_A 15 EGQTLTLKCVTSLRKNSSLQWLTPSGFTIFLNEYPVLKNSKYQLLHHSANQLSITVPNVTLQDEGVYKCLHYSD-SVSTK 93 (124)
T ss_dssp TTSCEEEEEECCCCTTCEEEEECTTSCEEEETTEECSCSSCCEEEEEETTEEEEEESSCCGGGCEEEEEEEESS-SEEEE
T ss_pred CCCCEEEEeEEeccCCCEEEEECCCCeEEEEeccccccCCcEEEEeCCCCEEEEEECCCChHHCEEEEEEEEcC-CCCcE
Confidence 48999999999988889999997554311 0 01357899999999999999999998 55555
Q ss_pred EeeEEEe
Q psy12725 63 SGELKLG 69 (119)
Q Consensus 63 ~~~~~v~ 69 (119)
...+.|.
T Consensus 94 ~~~l~V~ 100 (124)
T 3rbg_A 94 EVKVIVL 100 (124)
T ss_dssp EEEEEEE
T ss_pred EEEEEEE
Confidence 5555554
No 301
>2cr6_A KIAA1556 protein, obscurin; IG-fold, immunoglobulin domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.40 E-value=1.6e-12 Score=66.51 Aligned_cols=65 Identities=17% Similarity=0.312 Sum_probs=49.8
Q ss_pred CCccEEEEEEeccCCCCeeEEeeCCccCCCC----------CCCeEEEecCCCCCCeEEEEEEEcCCCCceeEeeEEEe
Q psy12725 1 MLALKFFTCKYEGNPVKTISWMKDGKPVPDH----------NEPVFRIDSVRKEDKGMYQCVIRNEQESAQASGELKLG 69 (119)
Q Consensus 1 ~g~~~~l~c~~~~~~~~~v~w~~~~~~~~~~----------~~~~l~~~~~~~~d~g~y~C~~~~~~~~~~~~~~~~v~ 69 (119)
.|+.+.|.|.+.+.|.+.+.|++++..+... ....|.|.+++.+|.|.|.|.+ +.......+.|.
T Consensus 27 ~G~~v~l~C~~~g~p~p~v~W~k~g~~l~~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~~----g~~~~~~~L~V~ 101 (115)
T 2cr6_A 27 EGSSATFRCRISPANYEPVHWFLDKTPLHANELNEIDAQPGGYHVLTLRQLALKDSGTIYFEA----GDQRASAALRVT 101 (115)
T ss_dssp TTSCEECCCEEESTTCCSCEEEESSCEECCSSSCCBCCBTTTBCCBEECSCCTTTCEEEEEEE----TTEECCEEEEEE
T ss_pred CCCcEEEEEEEcCCCCCccEEEECCEECCCCCcEEEEEcCCCEEEEEEcCCChhhCEEEEEEE----CCeeEEEEEEEE
Confidence 4899999999999888899999998765432 2247999999999999999993 233334455553
No 302
>2v44_A NCAM2, neural cell adhesion molecule 2; phosphorylation, immunoglobulin domain, IG, membrane, homphilic, glycoprotein, transmembrane; 1.77A {Homo sapiens} PDB: 2xy2_A* 2vaj_A
Probab=99.40 E-value=1.8e-12 Score=71.29 Aligned_cols=69 Identities=19% Similarity=0.347 Sum_probs=53.9
Q ss_pred CCccEEEEEEeccCCCCeeEEeeCCccCCC--------CCCCeEEEecCCCCCCeEEEEEEEcCCCCceeEeeEEEe
Q psy12725 1 MLALKFFTCKYEGNPVKTISWMKDGKPVPD--------HNEPVFRIDSVRKEDKGMYQCVIRNEQESAQASGELKLG 69 (119)
Q Consensus 1 ~g~~~~l~c~~~~~~~~~v~w~~~~~~~~~--------~~~~~l~~~~~~~~d~g~y~C~~~~~~~~~~~~~~~~v~ 69 (119)
.|+.+.|.|.+.+.|.+.+.|++++..+.. .....|.|..++.+|.|.|+|.+.|..+.......+.+.
T Consensus 110 ~g~~~~l~C~~~g~p~p~v~W~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~n~~~~~~~~~~~~v~ 186 (189)
T 2v44_A 110 QGEDAEVVCRVSSSPAPAVSWLYHNEEVTTISDNRFAMLANNNLQILNINKSDEGIYRCEGRVEARGEIDFRDIIVI 186 (189)
T ss_dssp TTSCEEECCEEECSSCCEEEEEEEC--CEECCCTTEEECTTSCEEETTCCGGGCEEEEEEEEETTTTEEEEEEEEEE
T ss_pred CCCCEEEEEEECcCCCCcEEEEECCcEEeccCCCCEEEecCCcEEEEEcCcccCeEEEEEEEccccCceeeeeEEEE
Confidence 488999999999999999999998876632 234589999999999999999999987655545555443
No 303
>2yuv_A Myosin-binding protein C, SLOW-type; SLOW-type myosin-binding protein C, immunoglobulin domain, structural genomics, NPPSFA; NMR {Homo sapiens} PDB: 2yxm_A
Probab=99.40 E-value=5.3e-12 Score=62.99 Aligned_cols=63 Identities=17% Similarity=0.326 Sum_probs=49.0
Q ss_pred CCccEEEEEEeccCCCCeeEEeeCCccCCCCC---------CCeEEEecCCCCCCeEEEEEEEcCCCCceeEeeEEE
Q psy12725 1 MLALKFFTCKYEGNPVKTISWMKDGKPVPDHN---------EPVFRIDSVRKEDKGMYQCVIRNEQESAQASGELKL 68 (119)
Q Consensus 1 ~g~~~~l~c~~~~~~~~~v~w~~~~~~~~~~~---------~~~l~~~~~~~~d~g~y~C~~~~~~~~~~~~~~~~v 68 (119)
.|+.+.|.|.+. .|.+.+.|++++..+.... ...|.|.+++.+|.|.|.|.+ +.......+.|
T Consensus 22 ~G~~v~l~C~~~-~p~~~v~W~k~g~~i~~~~~~~~~~~~~~~~L~I~~~~~~D~G~Y~C~a----g~~~~~~~l~V 93 (100)
T 2yuv_A 22 KGGRVRFVVELA-DPKLEVKWYKNGQEIRPSTKYIFEHKGCQRILFINNCQMTDDSEYYVTA----GDEKCSTELFV 93 (100)
T ss_dssp TTEEEEEEEEES-CTTSCEEEEESSCBCCCBTTEEEEEETTEEEEEEEEECTTTCCEEEEEE----TTEEEEEEEEE
T ss_pred CCCcEEEEEEec-CCCceEEEEECCEECCCCCCEEEEecCCEEEEEEcCCCcCcCEEEEEEE----CCceEEEEEEE
Confidence 388999999998 6888999999998774321 236899999999999999999 33344445554
No 304
>1z9m_A GAPA225; nectin-like, IG-like domain, V domain, cell adhesion; 2.40A {Homo sapiens}
Probab=99.40 E-value=1.7e-12 Score=69.03 Aligned_cols=68 Identities=18% Similarity=0.340 Sum_probs=51.3
Q ss_pred CCccEEEEEEeccCCCCeeEEee---------CCccCCCC---------CCCeEEEecCCCCCCeEEEEEEEcCCCCcee
Q psy12725 1 MLALKFFTCKYEGNPVKTISWMK---------DGKPVPDH---------NEPVFRIDSVRKEDKGMYQCVIRNEQESAQA 62 (119)
Q Consensus 1 ~g~~~~l~c~~~~~~~~~v~w~~---------~~~~~~~~---------~~~~l~~~~~~~~d~g~y~C~~~~~~~~~~~ 62 (119)
.|+.++|.|.+.+.+.+.+.|++ ++..+... ....|.|.+++..|+|.|+|.+.+. +....
T Consensus 52 ~G~~v~L~C~~~~~~~~~i~W~~~~~~~i~~~~~~~~~~~r~~~~~~~~~~~~L~I~~v~~~DsG~Y~C~~~n~-~~~~~ 130 (145)
T 1z9m_A 52 AGGTVVLKCQVKDHEDSSLQWSNPAQQTLYFGEKRALRDNRIQLVTSTPHELSISISNVALADEGEYTCSIFTM-PVRTA 130 (145)
T ss_dssp TTSCEEEEEECSCCTTCCEEEECTTCCEEEETTEECSCCTTEEEEEECSSEEEEEECSCCGGGCEEEEEEECSS-SCEEE
T ss_pred cCCCEEEEEEEcCCCCcEEEEECCCCcEEEECCceecccCCEEEecCCCCeEEEEECCCChhhCEEEEEEEEcC-CCceE
Confidence 48999999999988888999993 33322211 1357899999999999999999998 55555
Q ss_pred EeeEEEe
Q psy12725 63 SGELKLG 69 (119)
Q Consensus 63 ~~~~~v~ 69 (119)
...+.|.
T Consensus 131 ~~~L~V~ 137 (145)
T 1z9m_A 131 KSLVTVL 137 (145)
T ss_dssp EEEEEEE
T ss_pred EEEEEEE
Confidence 5555554
No 305
>2ny1_B T-cell surface glycoprotein CD4; HIV, GP120, CD4, viral protein-immune system compl; HET: NAG SUC; 1.99A {Homo sapiens} SCOP: b.1.1.1 b.1.1.3 PDB: 2nxz_B* 2ny0_B* 2nxy_B* 2ny2_B* 2ny3_B* 2ny4_B* 2ny5_C* 2ny6_B* 3jwd_C* 3jwo_C* 1g9m_C* 1g9n_C* 1gc1_C* 1rzj_C* 1rzk_C* 3o2d_A 3cd4_A 3lqa_C* 2b4c_C* 2qad_B* ...
Probab=99.40 E-value=1.2e-12 Score=71.82 Aligned_cols=68 Identities=7% Similarity=0.091 Sum_probs=55.4
Q ss_pred CCccEEEEEEeccCCCCeeEEeeCCccCCCCCCCeEEEecCCCCCCeEEEEEEEcCCCCceeEeeEEEe
Q psy12725 1 MLALKFFTCKYEGNPVKTISWMKDGKPVPDHNEPVFRIDSVRKEDKGMYQCVIRNEQESAQASGELKLG 69 (119)
Q Consensus 1 ~g~~~~l~c~~~~~~~~~v~w~~~~~~~~~~~~~~l~~~~~~~~d~g~y~C~~~~~~~~~~~~~~~~v~ 69 (119)
.|+.+.|.|.+.+.|.+.+.|++++..+. .....|.|.+++.+|.|.|+|.+.+..+.......+.|.
T Consensus 111 ~g~~~~l~C~~~~~p~~~v~W~~~~~~~~-~~~~~L~i~~v~~~d~G~Y~C~a~n~~~~~~~~~~l~V~ 178 (184)
T 2ny1_B 111 QGQSLTLTLESPPGSSPSVQCRSPRGKNI-QGGKTLSVSQLELQDSGTWTCTVLQNQKKVEFKIDIVVL 178 (184)
T ss_dssp TTCCEEEEEECCTTCCCEEEEECTTSCEE-EESSEEEESSCCGGGCEEEEEEEEETTEEEEEEEEEEEE
T ss_pred cCCCEEEEEEcCCCCCCEEEEEeCCCccc-cCceEEEEecCCcCCCeEEEEEEEECCceEEEEEEEEEE
Confidence 48899999999888999999999876553 356789999999999999999999876555555555543
No 306
>2cpc_A KIAA0657 protein; immunoglobulin domain, IG domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.39 E-value=5.7e-12 Score=64.14 Aligned_cols=54 Identities=30% Similarity=0.546 Sum_probs=45.4
Q ss_pred CCccEEEEEEeccCCCCeeEEeeCCccCCCCC---------CCeEEEecCCCCCCeEEEEEEEc
Q psy12725 1 MLALKFFTCKYEGNPVKTISWMKDGKPVPDHN---------EPVFRIDSVRKEDKGMYQCVIRN 55 (119)
Q Consensus 1 ~g~~~~l~c~~~~~~~~~v~w~~~~~~~~~~~---------~~~l~~~~~~~~d~g~y~C~~~~ 55 (119)
.|+.+.|.|.+. .|.+.+.|+|++..+.... ...|.|.+++.+|.|.|.|.+.|
T Consensus 27 ~G~~v~L~C~~~-~p~~~v~W~k~g~~~~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~n 89 (113)
T 2cpc_A 27 RLERVVLTCELC-RPWAEVRWTKDGEEVVESPALLLQKEDTVRRLVLPAVQLEDSGEYLCEIDD 89 (113)
T ss_dssp TTCCEEEEEEES-CTTCCCEEEETTEECCCBTTBEEEECSSEEEEEESSCCTTTCEEEEEESSS
T ss_pred cCCeEEEEEEec-CCCCeEEEEECCEECccCCCEEEEECCCEEEEEECCCCcccCEEEEEEEec
Confidence 388999999995 6888999999998764321 25799999999999999999987
No 307
>1pd6_A Cardiac MYBP-C;, myosin-binding protein C, cardiac-type, domain C2; IG domain, structural protein; NMR {Homo sapiens} SCOP: b.1.1.4
Probab=99.39 E-value=6.1e-12 Score=63.35 Aligned_cols=53 Identities=19% Similarity=0.359 Sum_probs=44.4
Q ss_pred CCccEEEEEEeccCCCCeeEEeeCCccCCCC-C------C---CeEEEecCCCCCCeEEEEEEE
Q psy12725 1 MLALKFFTCKYEGNPVKTISWMKDGKPVPDH-N------E---PVFRIDSVRKEDKGMYQCVIR 54 (119)
Q Consensus 1 ~g~~~~l~c~~~~~~~~~v~w~~~~~~~~~~-~------~---~~l~~~~~~~~d~g~y~C~~~ 54 (119)
.|+.+.|.|.+ +.|.+.+.|+|++..+... . . ..|.|.+++.+|+|.|.|.+.
T Consensus 30 ~G~~v~L~C~~-~~p~~~v~W~k~g~~l~~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~ 92 (104)
T 1pd6_A 30 KGHKIRLTVEL-ADHDAEVKWLKNGQEIQMSGSKYIFESIGAKRTLTISQCSLADDAAYQCVVG 92 (104)
T ss_dssp TTSCEEEEEEC-SSSSSCCEEEESSSEECCCSSSSEEEEETTEEEEEECSCSSSSCEEEEEEET
T ss_pred cCCCEEEEEEE-cCCCCEEEEEECCEECCCCCCeEEEEecCCEEEEEECCCCcccCEEEEEEEC
Confidence 48999999999 6788899999999876543 1 1 279999999999999999994
No 308
>2wv3_A Neuroplastin; igcam, membrane, glycoprotein, cell membrane, cell adhesion, transmembrane, disulfide bond, alternative splicing; HET: NAG; 1.95A {Rattus norvegicus}
Probab=99.39 E-value=9e-12 Score=68.65 Aligned_cols=69 Identities=28% Similarity=0.343 Sum_probs=54.2
Q ss_pred CCccEEEEEEeccCCCCeeEEee--CCccCCCC------------CCCeEEEecCC-CCCCeEEEEEEEcCCCCceeEee
Q psy12725 1 MLALKFFTCKYEGNPVKTISWMK--DGKPVPDH------------NEPVFRIDSVR-KEDKGMYQCVIRNEQESAQASGE 65 (119)
Q Consensus 1 ~g~~~~l~c~~~~~~~~~v~w~~--~~~~~~~~------------~~~~l~~~~~~-~~d~g~y~C~~~~~~~~~~~~~~ 65 (119)
.|+.+.|.|.+.+.|.+.+.|++ ++..+... ....|.|.+++ .+|.|.|.|.+.|..+.......
T Consensus 106 ~g~~v~l~C~~~g~p~p~i~W~~~~~g~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~~d~G~Y~C~a~N~~g~~~~~~~ 185 (190)
T 2wv3_A 106 EGQDAMMYCKSVGYPHPEWMWRKKENGVFEEISNSSGRFFIINKENYTELNIVNLQITEDPGEYECNATNSIGSASVSTV 185 (190)
T ss_dssp TTSCEEEEEEEECSSCCEEEEEEEETTEEEECCCTTSCEEEEECSSEEEEEECSCCTTTSCEEEEEEEECSSCEEEEEEE
T ss_pred CCCcEEEEEEeCccCCCceEEEEcCCCceeeeecCCCeEEEecCCCeeEEEEEeccccCCCEEEEEEEEecCCcceeEEE
Confidence 38899999999999999999999 66554321 11369999999 69999999999999877666665
Q ss_pred EEEe
Q psy12725 66 LKLG 69 (119)
Q Consensus 66 ~~v~ 69 (119)
+.|.
T Consensus 186 l~V~ 189 (190)
T 2wv3_A 186 LRVR 189 (190)
T ss_dssp EEEE
T ss_pred EEEE
Confidence 5553
No 309
>3sob_H Antibody heavy chain, low-density lipoprotein receptor-related protein; beta propeller, protein binding-immune system complex; 1.90A {Homo sapiens} PDB: 1pkq_B 3uls_H 3ulu_D* 3ulv_D*
Probab=99.38 E-value=5.8e-12 Score=72.66 Aligned_cols=108 Identities=17% Similarity=0.308 Sum_probs=65.3
Q ss_pred CCccEEEEEEeccC--CCCeeEEeeCC--ccCC-----------------CC-----------CCCeEEEecCCCCCCeE
Q psy12725 1 MLALKFFTCKYEGN--PVKTISWMKDG--KPVP-----------------DH-----------NEPVFRIDSVRKEDKGM 48 (119)
Q Consensus 1 ~g~~~~l~c~~~~~--~~~~v~w~~~~--~~~~-----------------~~-----------~~~~l~~~~~~~~d~g~ 48 (119)
.|+.|+|.|.+.+. ....+.|||.. .... .. ....|.|.+++.+|+|.
T Consensus 37 ~G~~v~L~C~~~~~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~sL~I~~v~~~DsG~ 116 (256)
T 3sob_H 37 PGGSLRLSCAASGFTFTNSYIHWVRQAPGKGLEWVGWITPYGGYTNYADSVKGRFTISADTSKNTAYLQMNSLRAEDTAV 116 (256)
T ss_dssp TTCCEEEEEEEESSCGGGSCEEEEEECTTCCCEEEEEEETTTTEEEECTTTTTTEEEEEEGGGTEEEEEECSCCGGGCEE
T ss_pred CCCCEEEEEEeeccccCCCEEEEEEECCCCCcEEEEEEecCCCceecCCCCCCcEEEEEeCCCCEEEEEECCCCcccCEE
Confidence 48999999999653 24579999732 1100 00 11249999999999999
Q ss_pred EEEEEEcCCC-----------CceeEeeEEEee-ecCCCeeeecCCccccCCCCcEEEEeEEccC-C-CCeEEE
Q psy12725 49 YQCVIRNEQE-----------SAQASGELKLGG-RFDPPVIKESFSDETLNPGPNYYFKCIASGN-P-TPEISW 108 (119)
Q Consensus 49 y~C~~~~~~~-----------~~~~~~~~~v~~-~~~~~~~~~~~~~~~~~~g~~~~l~C~~~~~-p-~~~~~W 108 (119)
|.|.+.+..+ .......+.|.. ...+|.+........+.+|+.+.|.|.+.+. | ...+.|
T Consensus 117 Y~C~~~~~~~~~~~~~~~~~~~~~~~~~l~V~~~~~~~P~i~~~~~~~~~~~g~~v~L~C~~~~~~p~~~~v~W 190 (256)
T 3sob_H 117 YYCARGSGHVNAVKNYGYVMDYWGQGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSW 190 (256)
T ss_dssp EEEEEESSCTTCSSCCTTSEEEECCCEEEEECSSCCBCCEEEEECCC-----TTEEEEEEEEEEEBSSCCEEEE
T ss_pred EEEEEecCCCccccccccceeEECCCEEEEEecCCCCCCEEEEECCCcccccCCcEEEEEEEEEEECCCeEEEE
Confidence 9999986431 111223344432 1234555533333345689999999998774 4 336899
No 310
>1f97_A Junction adhesion molecule; immunoglobulin superfamily, beta-sandwich fold, cell adhesion; 2.50A {Mus musculus} SCOP: b.1.1.1 b.1.1.4
Probab=99.38 E-value=5.1e-12 Score=70.48 Aligned_cols=70 Identities=26% Similarity=0.417 Sum_probs=55.6
Q ss_pred CCccEEEEEE-eccCCCCeeEEeeCCc-cCCC----------------CCCCeEEEecCCCCCCeEEEEEEEcCCCCcee
Q psy12725 1 MLALKFFTCK-YEGNPVKTISWMKDGK-PVPD----------------HNEPVFRIDSVRKEDKGMYQCVIRNEQESAQA 62 (119)
Q Consensus 1 ~g~~~~l~c~-~~~~~~~~v~w~~~~~-~~~~----------------~~~~~l~~~~~~~~d~g~y~C~~~~~~~~~~~ 62 (119)
.|+.+.|.|. ..+.|.+.+.|++++. .+.. .....|.|.+++.+|.|.|.|.+.|..+....
T Consensus 118 ~g~~~~l~C~~~~~~p~~~i~W~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~n~~g~~~~ 197 (212)
T 1f97_A 118 IGNRAVLTCSEHDGSPPSEYSWFKDGISMLTADAKKTRAFMNSSFTIDPKSGDLIFDPVTAFDSGEYYCQAQNGYGTAMR 197 (212)
T ss_dssp TTSCEEEEEECSCCBSCCEEEEEETTEESBC-----CBSCSSSCEEECTTTCCEEESSCCGGGCEEEEEEEECSSSCCEE
T ss_pred CCCeEEEEEEcccCcCCCEEEEEeCCcccccccccccccccCceeEecCCCceEEEEecChhhCcEEEEEEccccCCccc
Confidence 4889999999 6888999999999998 6643 23567999999999999999999999877644
Q ss_pred EeeEEEee
Q psy12725 63 SGELKLGG 70 (119)
Q Consensus 63 ~~~~~v~~ 70 (119)
+..+.+.+
T Consensus 198 s~~~~l~V 205 (212)
T 1f97_A 198 SEAAHMDA 205 (212)
T ss_dssp CCCEEEEE
T ss_pred cceEEEEE
Confidence 44444443
No 311
>2dku_A KIAA1556 protein; beta-sandwich, IG-fold, obscurin, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.38 E-value=1.1e-11 Score=62.17 Aligned_cols=64 Identities=25% Similarity=0.413 Sum_probs=48.7
Q ss_pred CCccEEEEEEeccCCCCeeEEeeCCccCCCCC---------CCeEEEecCCCCCCeEEEEEEEcCCCCceeEeeEEEe
Q psy12725 1 MLALKFFTCKYEGNPVKTISWMKDGKPVPDHN---------EPVFRIDSVRKEDKGMYQCVIRNEQESAQASGELKLG 69 (119)
Q Consensus 1 ~g~~~~l~c~~~~~~~~~v~w~~~~~~~~~~~---------~~~l~~~~~~~~d~g~y~C~~~~~~~~~~~~~~~~v~ 69 (119)
.|+.+.|.|.+ +.|.+.+.|++++..+.... ...|.|.+++.+|.|.|.|. .+.......+.|.
T Consensus 22 ~G~~v~l~C~~-~~p~~~v~W~k~~~~l~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~----~g~~~~~~~l~V~ 94 (103)
T 2dku_A 22 EKGTAVFTCKT-EHPAATVTWRKGLLELRASGKHQPSQEGLTLRLTISALEKADSDTYTCD----IGQAQSRAQLLVQ 94 (103)
T ss_dssp TTSEEEEEEEC-SSCCSCCEEEESSCBCCSSSSEEEEEETTEEEEEEESCCTTTCSEEEEE----CSSCBCCEEEEEE
T ss_pred CCCcEEEEEEe-CCCCCeEEEEeCCEECCCCCeEEEEeCCCEEEEEECCCCcccCEEEEEE----eCCceEEEEEEEe
Confidence 48999999995 77888999999998775421 12799999999999999998 3333444555554
No 312
>2a38_A Titin; Z1Z2, structural protein; 2.00A {Homo sapiens} PDB: 1ya5_A 2f8v_A
Probab=99.38 E-value=2.1e-12 Score=71.20 Aligned_cols=68 Identities=19% Similarity=0.280 Sum_probs=54.4
Q ss_pred CCccEEEEEEeccCCCCeeEEeeCCccCCCCCC---------CeEEEecCCCCCCeEEEEEEEcCCCCceeEeeEEE
Q psy12725 1 MLALKFFTCKYEGNPVKTISWMKDGKPVPDHNE---------PVFRIDSVRKEDKGMYQCVIRNEQESAQASGELKL 68 (119)
Q Consensus 1 ~g~~~~l~c~~~~~~~~~v~w~~~~~~~~~~~~---------~~l~~~~~~~~d~g~y~C~~~~~~~~~~~~~~~~v 68 (119)
.|+.+.|.|.+.+.|.+.+.|++++..+..... ..|.|..++..|.|.|.|.+.|..+.......+.|
T Consensus 117 ~g~~~~l~C~~~g~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~l~V 193 (194)
T 2a38_A 117 QGSQVRLQVRVTGIPTPVVKFYRDGAEIQSSLDFQISQEGDLYSLLIAEAYPEDSGTYSVNATNSVGRATSTAELLV 193 (194)
T ss_dssp TTEEEEEEEEEEEESCCEEEEEETTEECCCSSSEEEEEETTEEEEEEEEECGGGCEEEEEEEEETTEEEEEEEEEEE
T ss_pred CCCEEEEEEEEEEecCCeEEEEECCEECCCCCcEEEEEcCCEEEEEECCCChhcCeEEEEEEEeCCCceEEEEEEEE
Confidence 378899999999889999999999987754321 26889999999999999999998766555554443
No 313
>2eny_A Obscurin; beta-sandwich, IG-fold, structural genomics, NPPSFA national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.37 E-value=5.4e-12 Score=63.53 Aligned_cols=65 Identities=15% Similarity=0.227 Sum_probs=49.6
Q ss_pred CCccEEEEEEeccCCC-CeeEEeeCCccCCCCC---------CCeEEEecCCCCCCeEEEEEEEcCCCCceeEeeEEEe
Q psy12725 1 MLALKFFTCKYEGNPV-KTISWMKDGKPVPDHN---------EPVFRIDSVRKEDKGMYQCVIRNEQESAQASGELKLG 69 (119)
Q Consensus 1 ~g~~~~l~c~~~~~~~-~~v~w~~~~~~~~~~~---------~~~l~~~~~~~~d~g~y~C~~~~~~~~~~~~~~~~v~ 69 (119)
.|+.+.|.|.+.+.+. +.+.|||++..+.... ...|.|.+++.+|+|.|+|.+.+. .....+.|.
T Consensus 22 ~G~~v~l~C~v~~~~~~~~v~W~k~g~~i~~~~r~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~~~----~~~a~L~V~ 96 (104)
T 2eny_A 22 EGESCSFECVLSHESASDPAMWTVGGKTVGSSSRFQATRQGRKYILVVREAAPSDAGEVVFSVRGL----TSKASLIVR 96 (104)
T ss_dssp SSCCEEEEEECSSCCCSSCBCCBSSSSBCSBCSSCEEEEETTEEEEEECSCCTTTCSCEEEEETTE----EEEECEEEE
T ss_pred CCCcEEEEEEEcCCCCCceeEEEECCEECCCCCCEEEEEcCCEEEEEECCCCHHHCEEEEEEECCe----eEEEEEEEe
Confidence 4899999999988764 4799999998875432 236999999999999999987542 345555554
No 314
>2v9t_A Roundabout homolog 1; structural protein-receptor complex, developmental protein, domain, roundabout, chemotaxis, LRR domain; 1.70A {Homo sapiens}
Probab=99.37 E-value=1.7e-12 Score=66.53 Aligned_cols=60 Identities=32% Similarity=0.496 Sum_probs=46.7
Q ss_pred CCccEEEEEEeccCCCCeeEEeeCCccCCCC-----------CCCeEEEec-----CCCCCCeEEEEEEEcCCCCc
Q psy12725 1 MLALKFFTCKYEGNPVKTISWMKDGKPVPDH-----------NEPVFRIDS-----VRKEDKGMYQCVIRNEQESA 60 (119)
Q Consensus 1 ~g~~~~l~c~~~~~~~~~v~w~~~~~~~~~~-----------~~~~l~~~~-----~~~~d~g~y~C~~~~~~~~~ 60 (119)
.|+.+.|.|.+.+.|.+.+.|++++..+... ....+.+.. ++..|.|.|.|.+.|..+..
T Consensus 23 ~G~~v~L~C~~~g~P~p~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~v~~~D~G~Y~C~a~N~~G~~ 98 (117)
T 2v9t_A 23 KGEPATLNCKAEGRPTPTIEWYKGGERVETDKDDPRSHRMLLPSGSLFFLRIVHGRKSRPDEGVYVCVARNYLGEA 98 (117)
T ss_dssp TTCCEEECCEEEEESCCEEEEEETTEECCCTTTCSSCSEEECTTSCEEESSCCCBTTBCSSCEEEEEEEEETTEEE
T ss_pred CCCcEEEEEECCccCCCeEEEEECCEeccccCCCCcceeEEecCCcEEEEEEEeCCCCcCcCEEEEEEEEeCccce
Confidence 4899999999999999999999998776432 123344443 46899999999999987654
No 315
>2jll_A NCAM2, neural cell adhesion molecule 2; immunoglobulin domain, immunoglobulin superfamily, transmembrane, phosphoprotein, membrane, glycoprotein; HET: NAG; 2.30A {Homo sapiens} PDB: 2xyc_A* 2jlk_A* 2doc_A
Probab=99.37 E-value=1.6e-11 Score=74.26 Aligned_cols=109 Identities=17% Similarity=0.202 Sum_probs=72.4
Q ss_pred CCccEEEEEEeccCCCCeeEEeeCCccCCCCC-----------CCeEEEecCCCCCCeEEEEEEEcCCCCceeEeeEEEe
Q psy12725 1 MLALKFFTCKYEGNPVKTISWMKDGKPVPDHN-----------EPVFRIDSVRKEDKGMYQCVIRNEQESAQASGELKLG 69 (119)
Q Consensus 1 ~g~~~~l~c~~~~~~~~~v~w~~~~~~~~~~~-----------~~~l~~~~~~~~d~g~y~C~~~~~~~~~~~~~~~~v~ 69 (119)
.|+.+.|.|.+.+.|.+.+.|++++..+.... ...|.|.++...|.|.|.|.+.|..+.......+.+.
T Consensus 114 ~g~~~~l~C~~~g~p~~~i~W~~~g~~l~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~N~~G~~~~~~~l~v~ 193 (389)
T 2jll_A 114 EGNPINISCDVKSNPPASIHWRRDKLVLPAKNTTNLKTYSTGRKMILEIAPTSDNDFGRYNCTATNHIGTRFQEYILALA 193 (389)
T ss_dssp TTCCEEEEECEEEESCCEEEEEETTEESSCTTCTTEEEEECSSCEEEEECCCSTTSSEEEEEEEEETTEEEEEEEEEEEC
T ss_pred cCCEEEEEEEEEecCCCeEEEEECCccCCcccCceEEEeccCCEEEEEECCCChhhCEEEEEEEEcCCCcEEEEEEEEec
Confidence 38899999999999999999999998775432 3468999999999999999999987765555444442
Q ss_pred eecCCCeeeecCCccccCCCCcEEEEeEEc----cCCCC--eEEEEECCE
Q psy12725 70 GRFDPPVIKESFSDETLNPGPNYYFKCIAS----GNPTP--EISWYLDGK 113 (119)
Q Consensus 70 ~~~~~~~~~~~~~~~~~~~g~~~~l~C~~~----~~p~~--~~~W~~~~~ 113 (119)
....+|.... .....+..+.+.|... +.|.. .+.|.+++.
T Consensus 194 ~~P~~P~~~~----~~~~~~~~~~l~w~~p~~~~g~pi~~y~v~~~~~~~ 239 (389)
T 2jll_A 194 DVPSSPYGVK----IIELSQTTAKVSFNKPDSHGGVPIHHYQVDVKEVAS 239 (389)
T ss_dssp CCCCCCEEEE----EEEECSSCEEEEEECCSCCTTSCEEEEEEEEEETTC
T ss_pred CCCCCCcceE----EeeccCCEEEEEEeCCCCCCCcceEEEEEEEEECCC
Confidence 2112221111 0112346678887632 22322 467777653
No 316
>2yd1_A Tyrosine-protein phosphatase LAR; hydrolase; 1.80A {Drosophila melanogaster} PDB: 3pxj_A
Probab=99.37 E-value=3.6e-12 Score=71.43 Aligned_cols=69 Identities=29% Similarity=0.556 Sum_probs=56.1
Q ss_pred CCccEEEEEEeccCCCCeeEEeeCCccCCCC------CCCeEEEecCCCCCCeEEEEEEEcCCCCceeE-eeEEEe
Q psy12725 1 MLALKFFTCKYEGNPVKTISWMKDGKPVPDH------NEPVFRIDSVRKEDKGMYQCVIRNEQESAQAS-GELKLG 69 (119)
Q Consensus 1 ~g~~~~l~c~~~~~~~~~v~w~~~~~~~~~~------~~~~l~~~~~~~~d~g~y~C~~~~~~~~~~~~-~~~~v~ 69 (119)
.|+.+.|.|.+.+.|.+.+.|++++..+... ....|.|..++..|.|.|+|.+.|..+..... ..+.|.
T Consensus 124 ~g~~v~l~C~~~g~p~p~i~W~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~N~~G~~~s~~~~l~V~ 199 (212)
T 2yd1_A 124 VGHTVLMTCKAIGNPTPNIYWIKNQTKVDMSNPRYSLKDGFLQIENSREEDQGKYECVAENSMGTEHSKATNLYVK 199 (212)
T ss_dssp TTCCEEECCEEECSSCCEEEEEETTEECCTTSTTEEEETTEEEECSCCGGGCEEEEEEEEETTEEEECCCEEEEEE
T ss_pred cCCeEEEEEEeccCCCCeEEEEECCeEcccCCCeEEccCCeEEEccCChhhCEEEEEEeecCCCceeEEEEEEEEE
Confidence 3889999999999999999999999877542 23589999999999999999999987655433 455554
No 317
>3iu4_H CHP3 FAB heavy chain; antibody, ganglioside, idiotype, immune system; 1.75A {Mus musculus} PDB: 1ibg_H* 3iy6_B
Probab=99.37 E-value=6.3e-12 Score=72.92 Aligned_cols=108 Identities=15% Similarity=0.308 Sum_probs=65.2
Q ss_pred CCccEEEEEEeccCC--CCeeEEeeCC--ccCC------------------C---------CCCCeEEEecCCCCCCeEE
Q psy12725 1 MLALKFFTCKYEGNP--VKTISWMKDG--KPVP------------------D---------HNEPVFRIDSVRKEDKGMY 49 (119)
Q Consensus 1 ~g~~~~l~c~~~~~~--~~~v~w~~~~--~~~~------------------~---------~~~~~l~~~~~~~~d~g~y 49 (119)
.|+.|+|.|.+.+.. ...+.|||.. .... . .....|.|.+++.+|+|.|
T Consensus 14 ~G~~v~L~C~~~~~~~~~~~v~W~r~~~~~~~~~l~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~sL~I~~v~~~DsG~Y 93 (263)
T 3iu4_H 14 PSQSLSITCTVSGFSLSRYSVHWVRQPPGKGLEWLGMIWGGGSTDYNSALKSRLSISKDNSKSQVFLKMNSLQTDDTAMY 93 (263)
T ss_dssp TTSCEEEEEEEESSCGGGSCEEEEEECTTSCCEEEEEECTTSCEEECGGGTTCEEEEEEGGGTEEEEEECSCCGGGCEEE
T ss_pred CCCCEEEEEEeccccCCceEEEEEEECCCCCcEEEEEEeCCCcEeeCcccCCCEEEEecCCCCEEEEEECCCCHHHCEEE
Confidence 489999999997532 4679999732 1100 0 0123499999999999999
Q ss_pred EEEEEcCCC--------CceeEeeEEEeee-cCCCeeeecCCccccCCCCcEEEEeEEccC-CC-CeEEE
Q psy12725 50 QCVIRNEQE--------SAQASGELKLGGR-FDPPVIKESFSDETLNPGPNYYFKCIASGN-PT-PEISW 108 (119)
Q Consensus 50 ~C~~~~~~~--------~~~~~~~~~v~~~-~~~~~~~~~~~~~~~~~g~~~~l~C~~~~~-p~-~~~~W 108 (119)
.|.+.+... .......+.|... ..+|.+........+..|+.+.|.|.+.+. |. +.+.|
T Consensus 94 ~C~~~~~~~~~~~~~~~~~~~~t~l~V~~~~~~~P~v~~~~~~~~~~~g~~~~L~C~~~~~~P~~~~v~W 163 (263)
T 3iu4_H 94 YCARSGVREGRAQAWFAYWGQGTLVTVSAASTKGPSVFPLAPSSKGSTSGTAALGCLVKDYFPEPVTVSW 163 (263)
T ss_dssp EEEEEECC---CEEEEEEECCCEEEEECSSCCBCCEEEEECCCCCC----EEEEEEEEEEEBSSCCEEEE
T ss_pred EEEEEeCCCCccccccceeCCceEEEEecccCCCCEEEEccCccccccCCcEEEEEEEEeEeCCceEEEE
Confidence 999986531 1112224444311 234555533333345688999999998775 32 47999
No 318
>1zvo_C Myeloma immunoglobulin D delta; immunoglobulin fold, antibody, immune system; NMR {Homo sapiens}
Probab=99.37 E-value=2.6e-11 Score=76.21 Aligned_cols=114 Identities=16% Similarity=0.314 Sum_probs=72.0
Q ss_pred CccEEEEEEeccC-CCC-eeEEeeCCccCCC-------C-CC-----CeEEEecCCCCCCeEEEEEEEcCCCCceeEe--
Q psy12725 2 LALKFFTCKYEGN-PVK-TISWMKDGKPVPD-------H-NE-----PVFRIDSVRKEDKGMYQCVIRNEQESAQASG-- 64 (119)
Q Consensus 2 g~~~~l~c~~~~~-~~~-~v~w~~~~~~~~~-------~-~~-----~~l~~~~~~~~d~g~y~C~~~~~~~~~~~~~-- 64 (119)
|+.+.|.|.+.+. |.+ .+.|++++..... . .+ +.|.|...... .|.|+|.+.|..+......
T Consensus 150 ~~~v~L~C~~~g~~P~p~~v~W~~~~~~~~~~~~~~~~~~~g~~~~~s~L~i~~~~~~-~g~ytC~v~n~~~~~~~~~~~ 228 (512)
T 1zvo_C 150 NSPVVLACLITGYHPTSVTVTWYMGTQSQPQRTFPEIQRRDSYYMTSSQLSTPLQQWR-QGEYKCVVQHTASKSKKEIFR 228 (512)
T ss_pred CCeEEEEEEEEeeecCceEEEEEcCcccCceEecCceecCCCCEEEEEEEEEcHHHcC-CceEEEEEEeCCCCceEEEec
Confidence 4678999999886 655 8999986543210 0 11 23566555555 8999999999875543332
Q ss_pred ---------eEEEeee-------------------------------------------------cCCCeeeecC-Cccc
Q psy12725 65 ---------ELKLGGR-------------------------------------------------FDPPVIKESF-SDET 85 (119)
Q Consensus 65 ---------~~~v~~~-------------------------------------------------~~~~~~~~~~-~~~~ 85 (119)
.+.+.+. ..+|.+...+ ....
T Consensus 229 ~~~~~~~~~~v~l~~pp~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~~p~v~~~~p~~~~ 308 (512)
T 1zvo_C 229 WPESPKAQASSVPTAQPQAEGSLAKATTAPATTRNTGRGGEEKKKEKEKEEQEERETKTPECPSHTQPLGVYLLTPAVQD 308 (512)
T ss_pred CCCCCCcCCEEEEeCCCchhccccccccCchhhccCcccccceeccCCcccccccCcccccCCCCCCCCEEEEECCChHH
Confidence 1222110 0123332222 2233
Q ss_pred cCCCCcEEEEeEEccCCCC--eEEEEECCEEcc
Q psy12725 86 LNPGPNYYFKCIASGNPTP--EISWYLDGKKLV 116 (119)
Q Consensus 86 ~~~g~~~~l~C~~~~~p~~--~~~W~~~~~~~~ 116 (119)
+..|+.+.|.|.+.+..++ .+.|+++|..+.
T Consensus 309 ~~~g~~~~L~C~v~g~~P~~~~i~W~k~g~~~~ 341 (512)
T 1zvo_C 309 LWLRDKATFTCFVVGSDLKDAHLTWEVAGKVPT 341 (512)
T ss_pred hccCCceEEEEEEeceECCCeEEEEEECCEecc
Confidence 5679999999999887443 899999998765
No 319
>2edk_A Myosin-binding protein C, fast-type; IG fold, fast MYBP-C, C-protein, skeletal muscle fast- isoform, MYBPCF, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.36 E-value=6e-13 Score=66.60 Aligned_cols=54 Identities=19% Similarity=0.374 Sum_probs=45.3
Q ss_pred CCccEEEEEEeccCCCCeeEEeeCCccCCCCC-------------CCeEEEecCCCCCCeEEEEEEEc
Q psy12725 1 MLALKFFTCKYEGNPVKTISWMKDGKPVPDHN-------------EPVFRIDSVRKEDKGMYQCVIRN 55 (119)
Q Consensus 1 ~g~~~~l~c~~~~~~~~~v~w~~~~~~~~~~~-------------~~~l~~~~~~~~d~g~y~C~~~~ 55 (119)
.|+.+.|.|.+.+.+ +.+.|+|++..+.... ...|.|.++..+|.|.|.|.+.+
T Consensus 22 ~G~~v~l~C~~~~~~-~~v~W~k~g~~i~~~~~~~~~~~~~~~~~~~~L~I~~~~~~D~G~Y~C~a~n 88 (101)
T 2edk_A 22 VGDRVEMAVEVSEEG-AQVMWMKNGVELTREDSFKARYRFKKDGKRHILIFSDVVQEDRGRYQVITNG 88 (101)
T ss_dssp SSCCCBCCEEESCSS-CCCEEEESSCBCCCSCCSSCCCEEEECSSEEEEECSSCCGGGCSBEEEECSS
T ss_pred CCCCEEEEEEEeCCC-CEEEEEECCEECCCCCCcceeEEEEECCCEEEEEECCCChhhCEEEEEEEcC
Confidence 488999999999878 8999999998775432 13588999999999999999876
No 320
>2dm7_A KIAA1556 protein; beta-sandwich, IG-fold, obscurin, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} PDB: 2edl_A 2edw_A 2gqh_A 2edt_A 2edq_A 2edr_A
Probab=99.36 E-value=2.5e-11 Score=61.32 Aligned_cols=53 Identities=19% Similarity=0.375 Sum_probs=42.8
Q ss_pred CCccEEEEEEeccCCCCeeEEeeCCccCCCCC---------CCeEEEecCCCCCCeEEEEEEEc
Q psy12725 1 MLALKFFTCKYEGNPVKTISWMKDGKPVPDHN---------EPVFRIDSVRKEDKGMYQCVIRN 55 (119)
Q Consensus 1 ~g~~~~l~c~~~~~~~~~v~w~~~~~~~~~~~---------~~~l~~~~~~~~d~g~y~C~~~~ 55 (119)
.|+.+.|.|.+.+. +.+.|++++..+.... ...|.|.+++.+|.|.|.|.+.+
T Consensus 22 ~G~~v~l~C~~~~~--p~v~W~k~~~~~~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~n 83 (108)
T 2dm7_A 22 EGATATLQCELSKV--APVEWKKGPETLRDGGRYSLKQDGTRCELQIHDLSVADAGEYSCMCGQ 83 (108)
T ss_dssp TTSCEEEEEEBSSS--CCCEEESSSSBCCSSSSCEEEEETTEEEEEESSCCTTTCSEEEEEETT
T ss_pred CCCcEEEEEEeCCC--CeeEEEECCEECCCCCCEEEEecCCEEEEEECCCCcccCEEEEEEEcC
Confidence 48999999999764 6899999988765321 12499999999999999999944
No 321
>1epf_A NCAM, protein (neural cell adhesion molecule); immunoglobulin fold, glycoprotein; 1.85A {Rattus norvegicus} SCOP: b.1.1.4 b.1.1.4 PDB: 2ncm_A 3ncm_A
Probab=99.35 E-value=3.4e-12 Score=70.31 Aligned_cols=68 Identities=19% Similarity=0.323 Sum_probs=53.7
Q ss_pred CCccEEEEEEeccCCCCeeEEeeCCccCCCC--------CCCeEEEecCCCCCCeEEEEEEEcCCCCceeEeeEEE
Q psy12725 1 MLALKFFTCKYEGNPVKTISWMKDGKPVPDH--------NEPVFRIDSVRKEDKGMYQCVIRNEQESAQASGELKL 68 (119)
Q Consensus 1 ~g~~~~l~c~~~~~~~~~v~w~~~~~~~~~~--------~~~~l~~~~~~~~d~g~y~C~~~~~~~~~~~~~~~~v 68 (119)
.|+.+.|.|.+.+.|.+.+.|++++..+... ....|.|..++..|.|.|.|.+.|..+.......+.+
T Consensus 114 ~g~~~~l~C~~~g~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~n~~~~~~~~~~i~v 189 (191)
T 1epf_A 114 EGEDAVIVCDVVSSLPPTIIWKHKGRDVILKKDVRFIVLSNNYLQIRGIKKTDEGTYRCEGRILARGEINFKDIQV 189 (191)
T ss_dssp TTSCEEECCEEECSSCCEEEEEETTEEGGGGCCTTEEECTTSCEEETTCCGGGCEEEEEEEEEGGGTEEEEEEEEE
T ss_pred CCCeEEEEEEECCCCCCEEEEEECCEEeeccCCceEEEecCCeEEECCCChhhCEEEEEEEEEecceeEEEEEEEE
Confidence 3889999999999999999999998776421 3457999999999999999999997644433444443
No 322
>3bn3_B ICAM-5, intercellular adhesion molecule 5, telencephalin; I domain, integrin, allosteric mobility, cell adhesi immune system; HET: NAG; 2.10A {Homo sapiens}
Probab=99.35 E-value=1.5e-11 Score=68.31 Aligned_cols=112 Identities=14% Similarity=0.181 Sum_probs=73.2
Q ss_pred CCccEEEEEEeccCCCC-eeEEeeC--CccCCC-CCCCeEEEecCCCCCCeEEEEEEEcCCCCceeEeeEEEeeecCCCe
Q psy12725 1 MLALKFFTCKYEGNPVK-TISWMKD--GKPVPD-HNEPVFRIDSVRKEDKGMYQCVIRNEQESAQASGELKLGGRFDPPV 76 (119)
Q Consensus 1 ~g~~~~l~c~~~~~~~~-~v~w~~~--~~~~~~-~~~~~l~~~~~~~~d~g~y~C~~~~~~~~~~~~~~~~v~~~~~~~~ 76 (119)
+|+++.|.|.+.. +.+ .+.|... ...... .....+.+.+++ +|.+.|.|.+..........+.+.+. ..|..
T Consensus 16 ~G~Sv~l~Cs~~c-~~p~~~~~~t~l~~~~~~~g~~~~~~~ls~vs-~d~~~~~C~~~c~~~~~~~~v~l~Vy--~~P~~ 91 (196)
T 3bn3_B 16 RGGSLWLNCSTNC-PRPERGGLETSLRRNGTQRGLRWLARQLVDIR-EPETQPVCFFRCARRTLQARGLIRTF--QRPDR 91 (196)
T ss_dssp TTEEEEEEEEECC-SSCSEEEEECSSEEEEEEEETTEEEEEEEEEC-SSEECCEEEEEETTEEEEEECEEEEE--BCCCC
T ss_pred CCCeEEEEEeCCC-CCCCccEEEEccCCeeEccccCceEEEEEEEc-cCCCceEEEEECCCCceEEEEEEEEe--cCCCc
Confidence 4899999999964 444 6777431 111111 122347778888 77777999987754334444444443 34444
Q ss_pred eeecCCccccCCCCcEEEEeEEccC-CCC--eEEEEECCEEcc
Q psy12725 77 IKESFSDETLNPGPNYYFKCIASGN-PTP--EISWYLDGKKLV 116 (119)
Q Consensus 77 ~~~~~~~~~~~~g~~~~l~C~~~~~-p~~--~~~W~~~~~~~~ 116 (119)
+.+.+....+.+|+.++|.|.+.+. |.. .+.|+++++.+.
T Consensus 92 v~i~~~~~~~~~G~~~tL~C~v~~~~P~~~L~i~wlkg~~~l~ 134 (196)
T 3bn3_B 92 VELMPLPPWQPVGENFTLSCRVPGAGPRASLTLTLLRGAQELI 134 (196)
T ss_dssp CEECCCCSSEETTSEEEEEEEETTCBCGGGEEEEEEETTEEEE
T ss_pred CEEccCCccccCCCcEEEEEEeCCccCCCCcEEEEEeCCEEee
Confidence 4444444458899999999999876 443 389999998875
No 323
>3lcy_A Titin; A-BAND, IG tandem domains, ATP-binding, calmodulin-BI cardiomyopathy, disease mutation, disulfide bond, immunoglo domain, isopeptide bond; 2.50A {Homo sapiens}
Probab=99.35 E-value=4.4e-12 Score=70.02 Aligned_cols=68 Identities=16% Similarity=0.352 Sum_probs=55.1
Q ss_pred CCccEEEEEEeccCCCCeeEEeeCCccCCCCCC---------CeEEEecCCC-CCCeEEEEEEEcCCCCceeEeeEEE
Q psy12725 1 MLALKFFTCKYEGNPVKTISWMKDGKPVPDHNE---------PVFRIDSVRK-EDKGMYQCVIRNEQESAQASGELKL 68 (119)
Q Consensus 1 ~g~~~~l~c~~~~~~~~~v~w~~~~~~~~~~~~---------~~l~~~~~~~-~d~g~y~C~~~~~~~~~~~~~~~~v 68 (119)
.|+.+.|.|.+.+.|.+.+.|++++..+..... ..|.|..+.. .|.|.|+|.+.|..+.......+.+
T Consensus 117 ~g~~~~l~C~~~~~p~p~v~W~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~~d~G~Y~C~a~n~~g~~~~~~~l~V 194 (197)
T 3lcy_A 117 VGSTLRLHVMYIGRPVPAMTWFHGQKLLQNSENITIENTEHYTHLVMKNVQRKTHAGKYKVQLSNVFGTVDAILDVEI 194 (197)
T ss_dssp TTSCEEEEEEEEEESCCEEEEEETTEECCCCSSEEEEECSSEEEEEESSCCHHHHCEEEEEEEECSSCEEEEEEEEEE
T ss_pred CCCeEEEEEEEeeeeCCeeEEeECCEECCCCCceEEEEcCCEEEEEEccccchhhCceEEEEEEcCcCceEEEEEEEE
Confidence 378999999999999999999999987754322 5688888885 8999999999999876665555555
No 324
>2j8h_A Titin, connectin; cardiomyopathy, nuclear protein, serine/threonine-protein KI LIMB-girdle muscular dystrophy, phosphorylation; 1.99A {Homo sapiens} PDB: 2j8o_A 2ill_A
Probab=99.35 E-value=3.9e-12 Score=70.36 Aligned_cols=67 Identities=19% Similarity=0.344 Sum_probs=53.9
Q ss_pred CccEEEEEEeccCCCCeeEEeeCCccCCCC---------CCCeEEEec-CCCCCCeEEEEEEEcCCCCceeEeeEEE
Q psy12725 2 LALKFFTCKYEGNPVKTISWMKDGKPVPDH---------NEPVFRIDS-VRKEDKGMYQCVIRNEQESAQASGELKL 68 (119)
Q Consensus 2 g~~~~l~c~~~~~~~~~v~w~~~~~~~~~~---------~~~~l~~~~-~~~~d~g~y~C~~~~~~~~~~~~~~~~v 68 (119)
|+.+.|.|.+.+.|.+.+.|++++..+... ....|.|.. +...|.|.|+|.+.|..+.......+.|
T Consensus 119 g~~~~l~C~~~g~p~p~i~W~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~~d~G~Y~C~a~N~~g~~~~~~~l~V 195 (197)
T 2j8h_A 119 GEVVSIKIPFSGKPDPVITWQKGQDLIDNNGHYQVIVTRSFTSLVFPNGVERKDAGFYVVCAKNRFGIDQKTVELDV 195 (197)
T ss_dssp TCCCEEEEEEEEESCCEEEEEESSCEECSSSSCEEEECSSEEEEECTTCCCGGGCEEEEEEEEETTEEEEEEEEEEE
T ss_pred CCEEEEEEEEEecCCCcEEEEECCEEeecCCCEEEEEcCCceEEEEeCCCCcccCEeEEEEEEeCCCcEeEEEEEEE
Confidence 788999999999999999999998876532 224678888 9999999999999998766555555544
No 325
>3jz7_A MCAR, CAR, coxsackievirus and adenovirus receptor homolog; cell adhesion molecule, immunoglobuline superfamily, alternative splicing, cell adhesion; 2.19A {Mus musculus} PDB: 3mj7_B* 2npl_X
Probab=99.34 E-value=1.1e-11 Score=69.19 Aligned_cols=68 Identities=24% Similarity=0.404 Sum_probs=53.0
Q ss_pred CCccEEEEEEe-ccCCCCeeEEeeCCc--cCCC-----CCCCeEEEecCCCCCCeEEEEEEEcCCCCceeEeeEEE
Q psy12725 1 MLALKFFTCKY-EGNPVKTISWMKDGK--PVPD-----HNEPVFRIDSVRKEDKGMYQCVIRNEQESAQASGELKL 68 (119)
Q Consensus 1 ~g~~~~l~c~~-~~~~~~~v~w~~~~~--~~~~-----~~~~~l~~~~~~~~d~g~y~C~~~~~~~~~~~~~~~~v 68 (119)
.|+.+.|.|.+ .+.|.+.+.|++++. .+.. .....|.|..++.+|.|.|+|.+.|..+.......+.|
T Consensus 135 ~g~~v~l~C~~~~g~p~~~v~W~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~N~~g~~~~~~~l~V 210 (214)
T 3jz7_A 135 IGNDFKLKCEPKEGSLPLQFEWQKLSDSQTMPTPWLAEMTSPVISVKNASSEYSGTYSCTVQNRVGSDQCMLRLDV 210 (214)
T ss_dssp TTCCEEEEEECSBCCSSCEEEEEECSTTCCCCGGGGGGTTSSEEEECSCCGGGCEEEEEEEECSSCEEEEEEEECC
T ss_pred cCCcEEEEecCCCCCCCCEEEEEECCCCCccCccceeccCCCEEEEecCCHHHCEEEEEEEEcCCCcEEEEEEEEE
Confidence 38899999999 788999999999543 2221 24568999999999999999999998766654444443
No 326
>2e7b_A Obscurin; IG-like domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} PDB: 2yz8_A
Probab=99.34 E-value=1.1e-11 Score=62.06 Aligned_cols=64 Identities=14% Similarity=0.279 Sum_probs=48.6
Q ss_pred CCccEEEEEEeccCCCCeeEEeeCCccCCCCC---------CCeEEEecCCCCCCeEEEEEEEcCCCCceeEeeEEEe
Q psy12725 1 MLALKFFTCKYEGNPVKTISWMKDGKPVPDHN---------EPVFRIDSVRKEDKGMYQCVIRNEQESAQASGELKLG 69 (119)
Q Consensus 1 ~g~~~~l~c~~~~~~~~~v~w~~~~~~~~~~~---------~~~l~~~~~~~~d~g~y~C~~~~~~~~~~~~~~~~v~ 69 (119)
.|+.+.|.|.+.+.+.+ +.|++++..+.... ...|.|.+++.+|.|.|.|. .+.......+.|.
T Consensus 22 ~G~~v~l~C~~~~~p~~-v~W~k~~~~l~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~----~g~~~~~~~l~V~ 94 (103)
T 2e7b_A 22 EGGAATLRCVLSSVAAP-VKWCYGNNVLRPGDKYSLRQEGAMLELVVRNLRPQDSGRYSCS----FGDQTTSATLTVT 94 (103)
T ss_dssp SSSCEEEEEECSSCCCS-CEEEESSSBCCCSSSEEEEECSSEEEEEECSCCTTTCCCEEEE----CSSCBCCBCEEEE
T ss_pred CCCcEEEEEEEeCCCCC-eEEEECCEECCCCCcEEEEEcCCEEEEEEccCCcccCEEEEEE----ECCcEEEEEEEEE
Confidence 48999999999998888 99999988764321 13599999999999999998 2333344555553
No 327
>2edh_A Obscurin; structural genomics, NPPSFA, national project on P structural and functional analyses, riken structural genomics/proteomics initiative; NMR {Homo sapiens}
Probab=99.34 E-value=2.9e-11 Score=61.55 Aligned_cols=62 Identities=21% Similarity=0.392 Sum_probs=47.6
Q ss_pred CCccEEEEEEeccCCCCeeEEeeCCccCCCCC---------CCeEEEecCCCCCCeEEEEEEEcCCCCceeEeeEEE
Q psy12725 1 MLALKFFTCKYEGNPVKTISWMKDGKPVPDHN---------EPVFRIDSVRKEDKGMYQCVIRNEQESAQASGELKL 68 (119)
Q Consensus 1 ~g~~~~l~c~~~~~~~~~v~w~~~~~~~~~~~---------~~~l~~~~~~~~d~g~y~C~~~~~~~~~~~~~~~~v 68 (119)
.|+.+.|.|.+.+. +.+.|+|++..+.... ...|.|.+++.+|.|.|.|.+ +.......+.|
T Consensus 33 ~G~~v~l~C~~~~~--p~v~W~k~~~~l~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a----~~~~~~~~l~V 103 (113)
T 2edh_A 33 EGATAVLRCELSKM--APVEWWKGHETLRDGDRHSLRQDGARCELQIRGLVAEDAGEYLCMC----GKERTSAMLTV 103 (113)
T ss_dssp TTSCEEEEEEESSC--CCCEEEESSSBCCCSSSEEEEEETTEEEEEECSCCSTTCEEEEEEE----TTEEEEEEEEE
T ss_pred CCCeEEEEEEECCC--CcEEEEECCEECCCCCcEEEEECCCEEEEEECCCChhhCEEEEEEe----CCCCEEEEEEE
Confidence 48999999999764 7899999998775321 137999999999999999999 33344445554
No 328
>4gos_A V-SET domain-containing T-cell activation inhibit; immunoglobulin domain, glycoprotein, disulfide bond, immunit adaptive immunity; HET: NAG BMA MAN; 1.59A {Homo sapiens}
Probab=99.33 E-value=1.2e-11 Score=64.27 Aligned_cols=68 Identities=24% Similarity=0.430 Sum_probs=48.5
Q ss_pred CCccEEEEEEeccCCC---CeeEEeeCCccC-----------CC------------------CCCCeEEEecCCCCCCeE
Q psy12725 1 MLALKFFTCKYEGNPV---KTISWMKDGKPV-----------PD------------------HNEPVFRIDSVRKEDKGM 48 (119)
Q Consensus 1 ~g~~~~l~c~~~~~~~---~~v~w~~~~~~~-----------~~------------------~~~~~l~~~~~~~~d~g~ 48 (119)
+|+.|+|.|.+..... ..|.|+|.+... .. ....+|.|.+++.+|+|.
T Consensus 19 vG~~v~L~C~~~~~~~~~~~~V~W~k~~~~~~v~~~~~g~~~~~~~~~~~~~R~~~~~~~~~~g~~sL~I~~v~~~D~G~ 98 (125)
T 4gos_A 19 IGEDGILSCTFEPDIKLSDIVIQWLKEGVLGLVHEFKEGKDELSEQDEMFRGRTAVFADQVIVGNASLRLKNVQLTDAGT 98 (125)
T ss_dssp TTSCEEEEEEECCCSCGGGCEEEEEETTCSSBSEEEETTEECCTTBCGGGTTCEEECTTTGGGTBCCEEESSCCGGGCEE
T ss_pred CCCCEEEEEEEcCCcccCcEEEEEEEeccCceEEEEEeecccccccCccccceEEEecCCccCCeEEEEECCCChHHCEE
Confidence 5999999999864332 368999854211 00 013579999999999999
Q ss_pred EEEEEEcCCCCceeEeeEEE
Q psy12725 49 YQCVIRNEQESAQASGELKL 68 (119)
Q Consensus 49 y~C~~~~~~~~~~~~~~~~v 68 (119)
|.|.+.+..+.....+.++|
T Consensus 99 Y~C~v~~~~g~~~~~v~LkV 118 (125)
T 4gos_A 99 YKCYIITSKGKGNANLEYKT 118 (125)
T ss_dssp EEEEEEETTEEEEEEEEEEE
T ss_pred EEEEEEeCCCeEEEEEEEEE
Confidence 99999997665555555554
No 329
>2cry_A KIN of IRRE-like protein 3; IG fold, KIN of irregular chiasm-like protein 3, nephrin- like 2, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.1.1.1
Probab=99.33 E-value=1.6e-13 Score=70.97 Aligned_cols=68 Identities=18% Similarity=0.238 Sum_probs=53.8
Q ss_pred CCccEEEEEEeccCCCCe-eEEeeCCccCCCC-------------C--CCeEEEecCCCCCC-eEEEEEEEcCCCCceeE
Q psy12725 1 MLALKFFTCKYEGNPVKT-ISWMKDGKPVPDH-------------N--EPVFRIDSVRKEDK-GMYQCVIRNEQESAQAS 63 (119)
Q Consensus 1 ~g~~~~l~c~~~~~~~~~-v~w~~~~~~~~~~-------------~--~~~l~~~~~~~~d~-g~y~C~~~~~~~~~~~~ 63 (119)
.|+.+.|.|.+.+.|.|. +.|++++..+... . ...|.|.+++..|. |.|.|.+.|..+.....
T Consensus 27 ~G~~v~l~C~~~g~P~p~~i~W~~~~~~l~~~~~~~~~~~~~~~~~~~~~~L~I~~v~~~D~~G~Y~C~a~N~~G~~~~~ 106 (122)
T 2cry_A 27 HGEKGQIKCFIRSTPPPDRIAWSWKENVLESGTSGRYTVETISTEEGVISTLTISNIVRADFQTIYNCTAWNSFGSDTEI 106 (122)
T ss_dssp TTSCCCCCEEECCSSCCSEEEEESSSCEECSEEETTEEEEEEEETTEEEEEEECTTCCHHHHHSCEEEEEECSSCEEEEE
T ss_pred cCCCEEEEEEEeecCCCcEeEEEECCEEccCCCCCCEEEEEecCCCceEEEEEEcCCChhhCCceEEEEEECCCCeEEEE
Confidence 488999999999999886 9999998766431 1 23788889999998 99999999998766555
Q ss_pred eeEEE
Q psy12725 64 GELKL 68 (119)
Q Consensus 64 ~~~~v 68 (119)
+.+.+
T Consensus 107 ~~l~V 111 (122)
T 2cry_A 107 IRLKE 111 (122)
T ss_dssp ECCCC
T ss_pred EEEEE
Confidence 55544
No 330
>2c5d_C AXL oncogene, tyrosine-protein kinase receptor UFO; signaling protein/receptor, growth regulation/complex, vitamin K-dependent protein; HET: NAG; 3.3A {Homo sapiens}
Probab=99.33 E-value=1.7e-11 Score=67.78 Aligned_cols=66 Identities=12% Similarity=0.392 Sum_probs=51.7
Q ss_pred CCccEEEEEEeccCCCC-eeEEeeCCccCCCC----CCCeEEEecCCCCCCeEEEEEEEcCCCCce-eEeeEEE
Q psy12725 1 MLALKFFTCKYEGNPVK-TISWMKDGKPVPDH----NEPVFRIDSVRKEDKGMYQCVIRNEQESAQ-ASGELKL 68 (119)
Q Consensus 1 ~g~~~~l~c~~~~~~~~-~v~w~~~~~~~~~~----~~~~l~~~~~~~~d~g~y~C~~~~~~~~~~-~~~~~~v 68 (119)
.|+.+.|.|.+.+.|.+ .+.|++++..+... ....|.|.+++ |.|.|.|.+.|..+... ....+.|
T Consensus 120 ~g~~~~l~C~~~g~p~p~~v~W~~~~~~~~~~~~~~~~~~L~i~~~~--d~G~Y~C~a~N~~g~~~s~~~~l~V 191 (195)
T 2c5d_C 120 ANTPFNLSCQAQGPPEPVDLLWLQDAVPLATAPGHGPQRSLHVPGLN--KTSSFSCEAHNAKGVTTSRTATITV 191 (195)
T ss_dssp TTCCEEEEEEEECSSCCCEEEEEESSCBSSSSTTSSCCEEEEECCCS--SCEEEEEEEEETTEEEECCCEEEEE
T ss_pred CCCEEEEEeECCCCCCCCEEEEEECCEeccCCCCcCCCCeEEEcccc--cCceEEEEEEcCCCceEEEEEEEEE
Confidence 38899999999999988 99999999887543 45678888776 78999999999876543 3444443
No 331
>3grw_A Fibroblast growth factor receptor 3; FGFR3, protein-protein complex, receptor tyrosine kinas binding, immunoglobulin domain, kinase, membrane, nucleotid binding; HET: NAG; 2.10A {Homo sapiens}
Probab=99.33 E-value=1.6e-11 Score=69.82 Aligned_cols=69 Identities=25% Similarity=0.365 Sum_probs=54.9
Q ss_pred CCccEEEEEEeccCCCCeeEEee----CCccCCCCC-----------------CCeEEEecCCCCCCeEEEEEEEcCCCC
Q psy12725 1 MLALKFFTCKYEGNPVKTISWMK----DGKPVPDHN-----------------EPVFRIDSVRKEDKGMYQCVIRNEQES 59 (119)
Q Consensus 1 ~g~~~~l~c~~~~~~~~~v~w~~----~~~~~~~~~-----------------~~~l~~~~~~~~d~g~y~C~~~~~~~~ 59 (119)
.|+.+.|.|.+.+.|.+.+.|++ ++..+.... ...|.|..++..|.|.|+|.+.|..+.
T Consensus 128 ~g~~v~L~C~~~~~p~p~v~W~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~N~~g~ 207 (241)
T 3grw_A 128 LGSDVEFHCKVYSDAQPHIQWLKHVEVNGSKVGPDGTPYVTVLKSWISESVEADVRLRLANVSERDGGEYLCRATNFIGV 207 (241)
T ss_dssp TTCCEEEEEEEECSSCCEEEEEEECCSSSCSSCTTTCCCEEEEEEEECSBSEEEEEEEECSCCGGGCEEEEEEEECSSCE
T ss_pred CCCEEEEEEEEecCCCCEEEEEEcccCCCcccCCCCceeeeeeeEeeeeecCCceEEEECcCCcccCcEEEEEEecCcce
Confidence 38899999999999999999999 776654321 235899999999999999999998876
Q ss_pred ceeEeeEEEe
Q psy12725 60 AQASGELKLG 69 (119)
Q Consensus 60 ~~~~~~~~v~ 69 (119)
......+.+.
T Consensus 208 ~~~~~~l~V~ 217 (241)
T 3grw_A 208 AEKAFWLSVH 217 (241)
T ss_dssp EEEEEEEEC-
T ss_pred EEEEEEEEec
Confidence 6666655554
No 332
>3f8u_B Tapasin; endoplasmic reticulum, glycoprotein, immunoglobulin domain, microsome, protein disulfide isomerase, thioredoxin-like FO like domain; HET: NAG; 2.60A {Homo sapiens}
Probab=99.32 E-value=3.6e-11 Score=73.17 Aligned_cols=76 Identities=24% Similarity=0.345 Sum_probs=53.3
Q ss_pred CeEEEecCCCCCCeEEEEEEEcCCCCceeEeeEEEeeecCCCeeeecCCccc-cCCCC-cEEEEeEEccC-CC--CeEEE
Q psy12725 34 PVFRIDSVRKEDKGMYQCVIRNEQESAQASGELKLGGRFDPPVIKESFSDET-LNPGP-NYYFKCIASGN-PT--PEISW 108 (119)
Q Consensus 34 ~~l~~~~~~~~d~g~y~C~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~-~~~g~-~~~l~C~~~~~-p~--~~~~W 108 (119)
.+|.|.+++.+|+|.|.|.+.+..+.....+.+.+. .+|.+...+.... +..|+ .+.|.|.+.+. |. +.+.|
T Consensus 254 ~sL~I~~v~~~D~G~Y~C~v~~~~~~~~~~v~L~V~---~pP~V~v~p~~~~~~~~G~~~vtL~C~a~GfyP~~~~~VtW 330 (401)
T 3f8u_B 254 GTFWLPRVQPFQEGTYLATIHLPYLQGQVTLELAVY---KPPKVSLMPATLARAAPGEAPPELLCLVSHFYPSGGLEVEW 330 (401)
T ss_dssp EEEEETTCCGGGCEEEEEEEEETTEEEEEEEEEEEE---BCCEEEEESSSCCCCCTTCCCCCEEEEEEEEBSSTTCEEEE
T ss_pred EEEEECcCCHhhCceEEEEEEecccceeEEEEEeec---cCCeEeeccCcceeecCCCccEEEEEEecCCcCCCCcEEEE
Confidence 357788999999999999998865443333444443 4677766544333 35676 79999999886 54 68999
Q ss_pred E-ECC
Q psy12725 109 Y-LDG 112 (119)
Q Consensus 109 ~-~~~ 112 (119)
+ +++
T Consensus 331 ~~rdg 335 (401)
T 3f8u_B 331 ELRGG 335 (401)
T ss_dssp EEESS
T ss_pred EecCC
Confidence 5 765
No 333
>3sgj_C Human FCG3A receptor; receptor complex, FC receptor, antibody, immune system; HET: NAG BMA MAN FUC; 2.20A {Homo sapiens} PDB: 3sgk_C*
Probab=99.32 E-value=2.6e-12 Score=71.90 Aligned_cols=56 Identities=20% Similarity=0.298 Sum_probs=47.4
Q ss_pred CCccEEEEEEeccC-CCCeeEEeeCCccCCC-CCCCeEEEecCCCCCCeEEEEEEEcC
Q psy12725 1 MLALKFFTCKYEGN-PVKTISWMKDGKPVPD-HNEPVFRIDSVRKEDKGMYQCVIRNE 56 (119)
Q Consensus 1 ~g~~~~l~c~~~~~-~~~~v~w~~~~~~~~~-~~~~~l~~~~~~~~d~g~y~C~~~~~ 56 (119)
.|+.+.|.|.+.+. |.+.+.|++++..+.. .....|.|.+++.+|.|.|+|.+.|.
T Consensus 102 ~G~~v~L~C~~~~~~p~~~v~W~k~g~~~~~~~~~~~L~i~~v~~~D~G~Y~C~a~n~ 159 (204)
T 3sgj_C 102 EEDPIHLRCHSWKNTALHKVTYLQNGKGRKYFHHNSDFYIPKATLKDSGSYFCRGLVG 159 (204)
T ss_dssp TTCCEEEEEEEGGGCCCEEEEEEETTEEEEEEEECCCEEESSCCGGGCEEEEEEEEET
T ss_pred CCCcEEEEEEecCCCCCceEEEEECCcEeecccCCceEEECcCCcccCEEEEEEEEeC
Confidence 38899999999655 5678999999987632 34678999999999999999999995
No 334
>2v9r_A Roundabout homolog 1; proto-oncogene, differentiation, phosphorylation, disease MU neuronal development, immunoglobulin domain, chemotaxis; 2.00A {Homo sapiens} PDB: 2v9q_A
Probab=99.32 E-value=6.2e-12 Score=70.18 Aligned_cols=76 Identities=32% Similarity=0.521 Sum_probs=54.5
Q ss_pred CCccEEEEEEe-ccCCCCeeEEeeCCccCCCC------CCCeEEEecCCCCCCeEEEEEEEcCCCCceeE-eeEEEeeec
Q psy12725 1 MLALKFFTCKY-EGNPVKTISWMKDGKPVPDH------NEPVFRIDSVRKEDKGMYQCVIRNEQESAQAS-GELKLGGRF 72 (119)
Q Consensus 1 ~g~~~~l~c~~-~~~~~~~v~w~~~~~~~~~~------~~~~l~~~~~~~~d~g~y~C~~~~~~~~~~~~-~~~~v~~~~ 72 (119)
.|+.+.|.|.+ .+.|.+.+.|++++..+... ....|.|..++.+|.|.|.|.+.|..+..... ..+.+.
T Consensus 125 ~g~~~~l~C~~~~~~p~~~v~W~~~~~~l~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~N~~g~~~s~~~~l~V~--- 201 (212)
T 2v9r_A 125 VGEPAVMECQPPRGHPEPTISWKKDGSPLDDKDERITIRGGKLMITYTRKSDAGKYVCVGTNMVGERESEVAELTVL--- 201 (212)
T ss_dssp TTSCEEEECBCCCEESCCEEEEEETTEEECTTSTTEEEETTEEEESSCCGGGCEEEEEEEEETTEEEECCCEEEEEE---
T ss_pred CCCcEEEEEecCCCCCCCEEEEEECCccCCCCcceEEccCCeEEEeeCCHhhCeeEEEEEecccCceecceEEEEEE---
Confidence 38899999998 78899999999999877542 23579999999999999999999986543322 344443
Q ss_pred CCCeeee
Q psy12725 73 DPPVIKE 79 (119)
Q Consensus 73 ~~~~~~~ 79 (119)
.+|.+..
T Consensus 202 ~~P~~~~ 208 (212)
T 2v9r_A 202 ERPSFVK 208 (212)
T ss_dssp C------
T ss_pred eCchHhh
Confidence 3555443
No 335
>1f2q_A High affinity immunoglobulin epsilon receptor ALP subunit; immunoglobulin fold, glycoprotein, IGE-binding Pro immune system; HET: NAG MAN; 2.40A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 PDB: 1j86_A* 1rpq_A* 2y7q_A* 1f6a_A* 1j88_A* 1j89_A* 1j87_A*
Probab=99.31 E-value=2.1e-11 Score=66.54 Aligned_cols=56 Identities=21% Similarity=0.255 Sum_probs=48.1
Q ss_pred CCccEEEEEEec-cCCCCeeEEeeCCccCCC-CCCCeEEEecCCCCCCeEEEEEEEcC
Q psy12725 1 MLALKFFTCKYE-GNPVKTISWMKDGKPVPD-HNEPVFRIDSVRKEDKGMYQCVIRNE 56 (119)
Q Consensus 1 ~g~~~~l~c~~~-~~~~~~v~w~~~~~~~~~-~~~~~l~~~~~~~~d~g~y~C~~~~~ 56 (119)
.|+.+.|.|.+. +.|.+.+.|++++..+.. .....|.|.+++.+|.|.|.|.+.|.
T Consensus 99 ~g~~~~l~C~~~~~~p~~~~~W~~~g~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~n~ 156 (176)
T 1f2q_A 99 EGQPLFLRCHGWRNWDVYKVIYYKDGEALKYWYENHNISITNATVEDSGTYYCTGKVW 156 (176)
T ss_dssp TTSCEEEEEEEGGGCCEEEEEEEETTEECCSCCCSSEEEESSCCGGGCEEEEEEEEET
T ss_pred CCCCEEEEEEecCCCCceEEEEEECCEEEeeecCCCeEEECCCCcccCEEEEEEEEeC
Confidence 388999999995 556679999999988754 34678999999999999999999986
No 336
>1b6u_A KIR2DL3, P58 killer cell inhibitory receptor; natural killer cell, HLA, major histocompatibility complex class I (MHC class I); 3.00A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4
Probab=99.31 E-value=9.2e-12 Score=72.06 Aligned_cols=105 Identities=10% Similarity=0.103 Sum_probs=49.8
Q ss_pred CCccEEEEEEeccCCCCeeEEeeCCccCCCC----------CCCeEEEecCCCCCCeEEEEEEEcCCCC---ceeEeeEE
Q psy12725 1 MLALKFFTCKYEGNPVKTISWMKDGKPVPDH----------NEPVFRIDSVRKEDKGMYQCVIRNEQES---AQASGELK 67 (119)
Q Consensus 1 ~g~~~~l~c~~~~~~~~~v~w~~~~~~~~~~----------~~~~l~~~~~~~~d~g~y~C~~~~~~~~---~~~~~~~~ 67 (119)
.|+.|+|.|.+.+. .+.+.|+|++..+... ....|.|.+++ |.|.|.|.+.+.... ...+..+.
T Consensus 120 ~G~~vtL~C~~~~~-~~~~~w~k~g~~~~~~~~~~~~~~~~~~~~l~I~~v~--D~G~Y~C~a~~~~~p~~~s~~S~pl~ 196 (257)
T 1b6u_A 120 AGESVTLSCSSRSS-YDMYHLSREGEAHERRFSAGPKVNGTFQADFPLGPAT--HGGTYRCFGSFRDSPYEWSNSSDPLL 196 (257)
T ss_dssp TTCEEEEEEECSSC-CSEEEEEETTSSCEECCBCBCCSSSCCBEEEEEEECC--SCEEEEEEEECSSCTTBBCCCCCCEE
T ss_pred CCCEEEEEEeCCCC-CcEEEEEECCcccCcccccccccCCceeEEEEecccc--cCEEEEEEEEcCCCCcccccCCCCEE
Confidence 38999999999874 4689999998765321 24678898888 999999999975322 12344455
Q ss_pred EeeecCCCeeeec-CCccccCCCCcEEEEeEEccCCCCeEEEEE
Q psy12725 68 LGGRFDPPVIKES-FSDETLNPGPNYYFKCIASGNPTPEISWYL 110 (119)
Q Consensus 68 v~~~~~~~~~~~~-~~~~~~~~g~~~~l~C~~~~~p~~~~~W~~ 110 (119)
+.+. .+|.+... +.......|..+.|.|.+ |.+.+.+.|..
T Consensus 197 L~V~-g~p~~~~p~~~~~~~~~g~~~~l~~~~-~~~~~~~~~~~ 238 (257)
T 1b6u_A 197 VSVT-GNPSNSWPSPTEPSSETGNPRHLHAAA-EQKLISEEDLN 238 (257)
T ss_dssp ECCB-CCC------------------------------------
T ss_pred EEEe-ccCCCCCCCCcccCccCCCeEEEEEEE-cchHHHHHHhh
Confidence 5553 23443321 112234568888999865 55566777764
No 337
>2yd6_A PTPRD protein; hydrolase; HET: FLC; 1.35A {Homo sapiens} PDB: 2yd7_A 2yd2_A 2yd3_A 2yd4_A* 2yd8_A* 2yd5_A* 3pxh_A
Probab=99.31 E-value=5.5e-12 Score=70.69 Aligned_cols=60 Identities=28% Similarity=0.528 Sum_probs=50.0
Q ss_pred CCccEEEEEEeccCCCCeeEEeeCCccCCCC------------CCCeEEEecCCCCCCeEEEEEEEcCCCCc
Q psy12725 1 MLALKFFTCKYEGNPVKTISWMKDGKPVPDH------------NEPVFRIDSVRKEDKGMYQCVIRNEQESA 60 (119)
Q Consensus 1 ~g~~~~l~c~~~~~~~~~v~w~~~~~~~~~~------------~~~~l~~~~~~~~d~g~y~C~~~~~~~~~ 60 (119)
.|+.+.|.|.+.+.|.+.+.|++++..+... ....|.|..++.+|.|.|+|.+.|..+..
T Consensus 122 ~g~~v~l~C~~~g~p~p~v~W~~~g~~l~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~N~~G~~ 193 (212)
T 2yd6_A 122 RTRTATMLCAASGNPDPEITWFKDFLPVDTSNNNGRIKQLRSESIGALQIEQSEESDQGKYECVATNSAGTR 193 (212)
T ss_dssp TTSCEEEEEEEECSSCCEEEEEETTEEC------CCEEEEEETTEEEEEECSCCGGGCEEEEEEEEETTEEE
T ss_pred cCCCEEEEEEecCCCCCeEEEEECCccccCcCCCceEEEEecCCeEEEEEcCCCcccCEEEEEEEECCCCcc
Confidence 3789999999999999999999999877542 12678999999999999999999987654
No 338
>1nbq_A JAM, junctional adhesion molecule 1, PAM-1; reovirus receptor, tight junction formation, immunoglobulin superfamily, immune system; 2.90A {Homo sapiens} SCOP: b.1.1.1 b.1.1.4 PDB: 3eoy_G
Probab=99.31 E-value=4e-12 Score=70.78 Aligned_cols=66 Identities=26% Similarity=0.526 Sum_probs=53.4
Q ss_pred CCccEEEEEEe-ccCCCCeeEEeeCCccCCCC----------------CCCeEEEecCCCCCCeEEEEEEEcCCCCceeE
Q psy12725 1 MLALKFFTCKY-EGNPVKTISWMKDGKPVPDH----------------NEPVFRIDSVRKEDKGMYQCVIRNEQESAQAS 63 (119)
Q Consensus 1 ~g~~~~l~c~~-~~~~~~~v~w~~~~~~~~~~----------------~~~~l~~~~~~~~d~g~y~C~~~~~~~~~~~~ 63 (119)
.|+.+.|.|.+ .+.|.+.+.|++++..+... ....|.|.+++.+|.|.|.|.+.|..+....+
T Consensus 121 ~g~~~~l~C~~~~~~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~n~~g~~~~s 200 (209)
T 1nbq_A 121 IGNRAVLTCSEQDGSPPSEYTWFKDGIVMPTNPKSTRAFSNSSYVLNPTTGELVFDPLSASDTGEYSCEARNGYGTPMTS 200 (209)
T ss_dssp TTSCEEECCCCCSCBSCCEEEEEETTCCCCSCSSSSSSCTTCCCCCCTTTCCEEESSCCGGGCCCEEEEEECSSSCCEEC
T ss_pred cCCEEEEEEeCCCCCCCceeEEEECCeeCCCccccceeeeccceEEcCCcceEEEEeccccCCeEEEEEEeCCcCccccc
Confidence 38899999996 88899999999998776431 34689999999999999999999998766334
Q ss_pred eeE
Q psy12725 64 GEL 66 (119)
Q Consensus 64 ~~~ 66 (119)
..+
T Consensus 201 ~~v 203 (209)
T 1nbq_A 201 NAV 203 (209)
T ss_dssp CCB
T ss_pred ccE
Confidence 333
No 339
>2ifg_A High affinity nerve growth factor receptor; TRK, TRKA, receptor-ligand complex transferase; HET: NAG NDG MAN BMA; 3.40A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 c.10.2.7
Probab=99.31 E-value=6.7e-12 Score=75.25 Aligned_cols=67 Identities=16% Similarity=0.320 Sum_probs=54.0
Q ss_pred CccEEEEEEeccCCCCeeEEeeCCccCCCCC----------------CCeEEEecCCCCCCeEEEEEEEcCCCCceeEee
Q psy12725 2 LALKFFTCKYEGNPVKTISWMKDGKPVPDHN----------------EPVFRIDSVRKEDKGMYQCVIRNEQESAQASGE 65 (119)
Q Consensus 2 g~~~~l~c~~~~~~~~~v~w~~~~~~~~~~~----------------~~~l~~~~~~~~d~g~y~C~~~~~~~~~~~~~~ 65 (119)
|+.+.|.|.+.|.|.+.|.|++++..+.... ...|.|..++.+|.|.|+|.+.|..+.....+.
T Consensus 261 g~~v~l~C~~~g~P~p~i~W~~~g~~l~~~~~~~~~~~~~~~~~~~~~~~L~I~~v~~~d~G~Y~C~a~N~~G~~~~~~~ 340 (347)
T 2ifg_A 261 MHHWCIPFSVDGQPAPSLRWLFNGSVLNETSFIFTEFLEPAANETVRHGCLRLNQPTHVNNGNYTLLAANPFGQASASIM 340 (347)
T ss_dssp SSSEEEEEEEEEESCCEEEEEETTEECCCCSSEEEEECCCCTTCCCEEEEEEESSCCGGGCEEEEEEEEETTEEEEEEEE
T ss_pred CceEEEEEEeeecCCCcEEEEeCCEECCCCcceeeEEEeecCCCcccceEEEECCCCcccCceEEEEEecCCCceeeEEE
Confidence 7889999999999999999999998775321 234899999999999999999998765544444
Q ss_pred EEE
Q psy12725 66 LKL 68 (119)
Q Consensus 66 ~~v 68 (119)
+.|
T Consensus 341 l~V 343 (347)
T 2ifg_A 341 AAF 343 (347)
T ss_dssp ECS
T ss_pred EEe
Confidence 443
No 340
>3c6l_A TCR 2W20 alpha chain; TCR-PMHC complex; 3.40A {Mus musculus} SCOP: b.1.1.1 b.1.1.2
Probab=98.98 E-value=1.9e-13 Score=75.50 Aligned_cols=111 Identities=10% Similarity=0.217 Sum_probs=69.0
Q ss_pred CCccEEEEEEeccCCCCeeEEeeCC--cc---C-C--------C-----------CCCCeEEEecCCCCCCeEEEEEEEc
Q psy12725 1 MLALKFFTCKYEGNPVKTISWMKDG--KP---V-P--------D-----------HNEPVFRIDSVRKEDKGMYQCVIRN 55 (119)
Q Consensus 1 ~g~~~~l~c~~~~~~~~~v~w~~~~--~~---~-~--------~-----------~~~~~l~~~~~~~~d~g~y~C~~~~ 55 (119)
.|+.|+|.|.+.+.+.+.+.|||.. .. + . . .....|.|.+++.+|+|.|.|.+.+
T Consensus 14 ~G~svtL~C~~s~~~~~~v~Wyrq~~g~~~~~li~~~~~~~~~~~~R~s~~~~~~~~~~sL~I~~v~~~DsG~Y~C~~~~ 93 (185)
T 3c6l_A 14 EGETAILNCSYEDSTFDYFPWYHQFPGESPALLIAIRPVSNKKEDGRFTIFFNKREKKFSLHIADSQPGDSATYFCAASD 93 (185)
Confidence 4899999999876655689999843 11 1 0 0 0124689999999999999999875
Q ss_pred CCCCceeEeeEEEeeec--CCCeeeecCCccccCCCCcEEEEeEEccC-CCCeEEEEECCEEcc
Q psy12725 56 EQESAQASGELKLGGRF--DPPVIKESFSDETLNPGPNYYFKCIASGN-PTPEISWYLDGKKLV 116 (119)
Q Consensus 56 ~~~~~~~~~~~~v~~~~--~~~~~~~~~~~~~~~~g~~~~l~C~~~~~-p~~~~~W~~~~~~~~ 116 (119)
..........+.|.... .+|.+...... .+.+.|.|.+.+. |.|.+.|+.....+.
T Consensus 94 ~~~~fg~gT~L~V~~~~~~~~P~V~~~~~~-----~~~vtL~C~~~gf~P~p~v~~~~~~~~~~ 152 (185)
T 3c6l_A 94 NRIFFGDGTQLVVKPNIQNPEPAVYQLKDP-----RSQDSTLCLFTDFDSQINVPKTMESGTFI 152 (185)
Confidence 21112223344443211 12333322111 2278999999885 778999977655543
No 341
>3ojm_B Fibroblast growth factor receptor 2; beta trefoil motif, immunoglobulin-like domain, growth facto factor receptor, extracellular; 2.10A {Homo sapiens} PDB: 1nun_B* 3oj2_C 2fdb_P 1iil_E 1ev2_E 1e0o_B* 1ii4_E 1djs_A 3ojv_C* 1cvs_C 1fq9_C* 1evt_C
Probab=99.31 E-value=1.8e-11 Score=69.10 Aligned_cols=69 Identities=26% Similarity=0.371 Sum_probs=55.0
Q ss_pred CCccEEEEEEeccCCCCeeEEee----CCccCCCC----------------CCCeEEEecCCCCCCeEEEEEEEcCCCCc
Q psy12725 1 MLALKFFTCKYEGNPVKTISWMK----DGKPVPDH----------------NEPVFRIDSVRKEDKGMYQCVIRNEQESA 60 (119)
Q Consensus 1 ~g~~~~l~c~~~~~~~~~v~w~~----~~~~~~~~----------------~~~~l~~~~~~~~d~g~y~C~~~~~~~~~ 60 (119)
.|+.+.|.|.+.+.|.+.+.|++ ++..+... ....|.|..++..|.|.|+|.+.|..+..
T Consensus 132 ~g~~~~l~C~~~~~p~p~v~W~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~n~~g~~ 211 (231)
T 3ojm_B 132 VGGDVEFVCKVYSDAQPHIQWIKHVEKNGSKYGPDGLPYLKVLKHSGINSSNAEVLALFNVTEADAGEYICKVSNYIGQA 211 (231)
T ss_dssp TTCCEEEECCEECSSCCEEEEEEECCBTTBSBCTTSCBCEEEEEECSTTCSCTTEEEECSCCGGGCEEEEEEEEETTEEE
T ss_pred eCCcEEEEEEEecCCCCEEEEEECCCCCCccccCCCcceEeEecccccccCCccEEEEecCCHHHCeEEEEEEEeccceE
Confidence 38899999999999999999999 66554221 23569999999999999999999987766
Q ss_pred eeEeeEEEe
Q psy12725 61 QASGELKLG 69 (119)
Q Consensus 61 ~~~~~~~v~ 69 (119)
.....+.+.
T Consensus 212 ~~~~~l~V~ 220 (231)
T 3ojm_B 212 NQSAWLTVL 220 (231)
T ss_dssp EEEEEEEEE
T ss_pred eeEEEEEEe
Confidence 555666554
No 342
>2eo1_A OBSCN protein, cDNA FLJ14124 FIS, clone mamma1002498; beta-sandwich, IG-fold, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.30 E-value=8.2e-12 Score=62.46 Aligned_cols=54 Identities=19% Similarity=0.441 Sum_probs=45.2
Q ss_pred CCccEEEEEEeccCCCCeeEEeeCCccCCCCC---------CCeEEEecCCCCCCeEEEEEEEc
Q psy12725 1 MLALKFFTCKYEGNPVKTISWMKDGKPVPDHN---------EPVFRIDSVRKEDKGMYQCVIRN 55 (119)
Q Consensus 1 ~g~~~~l~c~~~~~~~~~v~w~~~~~~~~~~~---------~~~l~~~~~~~~d~g~y~C~~~~ 55 (119)
.|+.+.|.|.+. .|.+.+.|+|++..+.... ...|.|.+++..|.|.|.|.+.+
T Consensus 25 ~G~~v~L~C~~~-~p~~~v~W~k~g~~~~~~~~~~~~~~~~~~~L~I~~~~~~D~G~Y~C~a~~ 87 (102)
T 2eo1_A 25 AGASATLSCEVA-QAQTEVTWYKDGKKLSSSSKVRVEAVGCTRRLVVQQAGQAEAGEYSCEAGG 87 (102)
T ss_dssp TTCCEEECCBCS-CSSSCCEEEETTEECCCCSSEEEEEETTEEEEEETTCCTTTCSCEEEEETT
T ss_pred CCCcEEEEEEec-CCCCceEEEECCEECCCCCCEEEEEcCCEEEEEECCCCcccCEEEEEEcCC
Confidence 388999999998 7888999999998775421 24799999999999999999854
No 343
>3rgv_A YAE62 TCR A chain; TCR, MHC, MHC class I, immune system; 2.90A {Mus musculus} PDB: 3c60_A
Probab=99.30 E-value=2.7e-11 Score=67.61 Aligned_cols=112 Identities=14% Similarity=0.231 Sum_probs=70.3
Q ss_pred CCccEEEEEEeccCCCCeeEEeeC--CccCC-----------------------CCCCCeEEEecCCCCCCeEEEEEEEc
Q psy12725 1 MLALKFFTCKYEGNPVKTISWMKD--GKPVP-----------------------DHNEPVFRIDSVRKEDKGMYQCVIRN 55 (119)
Q Consensus 1 ~g~~~~l~c~~~~~~~~~v~w~~~--~~~~~-----------------------~~~~~~l~~~~~~~~d~g~y~C~~~~ 55 (119)
.|+.|+|.|.+.+.....+.|||. +..+. ......|.|.+++.+|+|.|.|.+..
T Consensus 14 ~G~svtL~C~~s~~~~~~v~Wyrq~~g~~~~~l~~~~~~~~~~~~~Rfs~~~~~~~~~~sL~I~~l~~~DsG~Y~Ca~~~ 93 (200)
T 3rgv_A 14 ENDFLFINCTYSTTGYPTLFWYVQYSGEGPQLLLQVTTANNKGSSRGFEATYDKGTTSFHLQKTSVQEIDSAVYYCAANS 93 (200)
T ss_dssp TTCCEEECCEEECSSCCEEEEEEECTTSCCEEEEEECSTTCEEEETTEEEECBTTTTBCCEEESSCCSTTCEEEEEEEES
T ss_pred CCCCEEEEEEecCCCCcEEEEEEeCCCCCcEEEEEecCCCCcccCCceEEEECCCCCEEEEEEcCCcCccCCCEEEEecc
Confidence 489999999997655568999983 22110 01235799999999999999999874
Q ss_pred CC-CCceeEeeEEEeee--cCCCeeeecCCccccCCCCcEEEEeEEccCCCC-eEEEEECCEEccc
Q psy12725 56 EQ-ESAQASGELKLGGR--FDPPVIKESFSDETLNPGPNYYFKCIASGNPTP-EISWYLDGKKLVN 117 (119)
Q Consensus 56 ~~-~~~~~~~~~~v~~~--~~~~~~~~~~~~~~~~~g~~~~l~C~~~~~p~~-~~~W~~~~~~~~~ 117 (119)
.. ........+.|... ..+|.+-..... ...++|.|.+.+..+. .+.|+++|..+..
T Consensus 94 ~~~~~fG~GT~L~V~~~~~~~~P~V~~~~~~-----~~~~tl~Cl~~gf~P~i~v~~~~~g~~~~~ 154 (200)
T 3rgv_A 94 GTYQRFGTGTKLQVVPNIQNPDPAVYQLRDS-----KSSDKSVCLFTDFDSQTNVSQSKDSDVYIT 154 (200)
T ss_dssp SSCCCCCCCEEEEEECCCSSCCCEEEEEEES-----SSSSCEEEEEESCCTTCCCCCCSSTTCEEC
T ss_pred CcccccCcCEEEEEeCCCCCCCCeEEEccCC-----CCCceEEEEcccccCCeEeEeccCCcEEee
Confidence 21 11223345555432 122333221111 1336799999887444 6899998876643
No 344
>3b5h_A Cervical EMMPRIN, HAB18G/CD147; IG-like domain, cell invasion; 2.80A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4
Probab=99.30 E-value=3.4e-11 Score=65.99 Aligned_cols=68 Identities=24% Similarity=0.417 Sum_probs=52.4
Q ss_pred CCccEEEEEEeccCC-CCeeEEee---CCcc-CCCC-----------CCCeEEEecCC-CCCCeEEEEEEEcCCCCceeE
Q psy12725 1 MLALKFFTCKYEGNP-VKTISWMK---DGKP-VPDH-----------NEPVFRIDSVR-KEDKGMYQCVIRNEQESAQAS 63 (119)
Q Consensus 1 ~g~~~~l~c~~~~~~-~~~v~w~~---~~~~-~~~~-----------~~~~l~~~~~~-~~d~g~y~C~~~~~~~~~~~~ 63 (119)
.|+.+.|.|.+.+.| .+.+.|++ ++.. +... ....|.|..++ ..|.|.|.|.+.|..+.....
T Consensus 97 ~g~~~~l~C~~~g~p~~~~i~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~~d~G~Y~C~a~N~~g~~~~~ 176 (184)
T 3b5h_A 97 EGETAMLVCKSESVPPVTDWAWYKITDSEDKALMNGSESRFFVSSSQGRSELHIENLNMEADPGQYRCNGTSSKGSDQAI 176 (184)
T ss_dssp TTSCEEEEEECCCSSCCCEEEEEECCSSSCEECCTTGGGTEEEEEETTEEEEEECSCCTTTSSEEEEEEEEETTEEEEEE
T ss_pred CCCcEEEEEEECCCCCCCeEEEEEcCCCCCEEeecCCCCEEEEEecCCeeEEEEeeccccccCceEEEEEEeCCCcceEE
Confidence 388999999999988 79999999 4433 3221 12379999999 899999999999988766555
Q ss_pred eeEEE
Q psy12725 64 GELKL 68 (119)
Q Consensus 64 ~~~~v 68 (119)
..+.|
T Consensus 177 ~~l~V 181 (184)
T 3b5h_A 177 ITLRV 181 (184)
T ss_dssp EEEEE
T ss_pred EEEEE
Confidence 55544
No 345
>2va4_A NCAM2, N-CAM 2, neural cell adhesion molecule 2; transmembrane, phosphorylation, immunoglobulin domain, membrane, glycoprotein; HET: NAG; 1.9A {Homo sapiens} PDB: 2xy1_A*
Probab=99.29 E-value=2e-11 Score=67.17 Aligned_cols=67 Identities=24% Similarity=0.462 Sum_probs=52.3
Q ss_pred CccEEEEEEeccCCCCeeEEeeC--CccCCCC--------------CCCeEEEecCCCCCCeEEEEEEEcCCCCceeEee
Q psy12725 2 LALKFFTCKYEGNPVKTISWMKD--GKPVPDH--------------NEPVFRIDSVRKEDKGMYQCVIRNEQESAQASGE 65 (119)
Q Consensus 2 g~~~~l~c~~~~~~~~~v~w~~~--~~~~~~~--------------~~~~l~~~~~~~~d~g~y~C~~~~~~~~~~~~~~ 65 (119)
|+.+.|.|.+.+.|.+.+.|+++ +..+... ....|.|..++.+|.|.|.|.+.|..+.......
T Consensus 109 g~~v~l~C~~~~~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~ 188 (192)
T 2va4_A 109 NGQVTLVCDAEGEPIPEITWKRAVDGFTFTEGDKSLDGRIEVKGQHGSSSLHIKDVKLSDSGRYDCEAASRIGGHQKSMY 188 (192)
T ss_dssp TSEEEEEEEEEEESCCEEEEEETTTTEEECTTCBCTTSCEEEEEETTEEEEEEESCCGGGCEEEEEEEECSSCEEEEEEE
T ss_pred CCeEEEEEEecCCCCCcEEEEeCCCCceeeccccccCCcEEEeeccCceEEEEecCCcccCEEEEEEEEecCCceEEEEE
Confidence 78999999999989999999998 4333211 1257899999999999999999999876555555
Q ss_pred EEE
Q psy12725 66 LKL 68 (119)
Q Consensus 66 ~~v 68 (119)
+.|
T Consensus 189 l~V 191 (192)
T 2va4_A 189 LDI 191 (192)
T ss_dssp EEE
T ss_pred EEe
Confidence 443
No 346
>3mlr_H Human monoclonal anti-HIV-1 GP120 V3 antibody 255 heavy chain; human monoclonal antibody, FAB, third variable antibody-antigen interaction; 1.80A {Homo sapiens} PDB: 3mls_H 3mlt_H 3mlu_H 3mlv_H
Probab=99.29 E-value=2.3e-11 Score=69.00 Aligned_cols=108 Identities=17% Similarity=0.242 Sum_probs=67.5
Q ss_pred CCccEEEEEEeccC--CCCeeEEeeCC--ccC-------C----------C-----------CCCCeEEEecCCCCCCeE
Q psy12725 1 MLALKFFTCKYEGN--PVKTISWMKDG--KPV-------P----------D-----------HNEPVFRIDSVRKEDKGM 48 (119)
Q Consensus 1 ~g~~~~l~c~~~~~--~~~~v~w~~~~--~~~-------~----------~-----------~~~~~l~~~~~~~~d~g~ 48 (119)
.|+.|+|.|.+.+. +...+.|||.. ... . . .....|.|.+++.+|+|.
T Consensus 14 ~G~~v~L~C~~~~~~~~~~~v~W~rq~~~~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~sL~I~~v~~~DsG~ 93 (226)
T 3mlr_H 14 PGQSLKISCKSSGYNFLDSWIGWVRQIPGKGLEWIGIIYPDDSDAHYSPSFEGQVTMSVDKSISTAYLQWTTLQASDTGK 93 (226)
T ss_dssp TTCCEEEEEEEESSCGGGSCEEEEEECTTSCCEEEEEEETTTTEEEECTTTBTTBEEEEEGGGTEEEEEESSCCGGGCEE
T ss_pred cCCCEEEEEEecCccccCCEEEEEEECCCCCcEEEEEEecCCCccccCcccCCcEEEEecCCCCEEEEEECCCCcccCEE
Confidence 48999999999653 34679999732 110 0 0 012349999999999999
Q ss_pred EEEEEEcCCC---------CceeEeeEEEeee-cCCCeeeecCCccccCCCCcEEEEeEEccC-C-CCeEEE
Q psy12725 49 YQCVIRNEQE---------SAQASGELKLGGR-FDPPVIKESFSDETLNPGPNYYFKCIASGN-P-TPEISW 108 (119)
Q Consensus 49 y~C~~~~~~~---------~~~~~~~~~v~~~-~~~~~~~~~~~~~~~~~g~~~~l~C~~~~~-p-~~~~~W 108 (119)
|.|.+.+... .......+.+... ..+|.+...+.......|..+.|.|.+.+. | .+.+.|
T Consensus 94 Y~C~~~~~~~~~~~~~~~~~~~~~t~l~V~~~~~~~P~i~~~~~~~~~~~g~~~~l~C~~~~~~p~~~~v~W 165 (226)
T 3mlr_H 94 YFCTRLYLFEGAQSSNAFDLWGQGTMILVSSGTTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSW 165 (226)
T ss_dssp EEEEEEEEEESSSEEEEEEEECCCEEEEECCCCCBCCEEEEEEEEECSTTSSEEEEEEEEEEEBSSCCEEEE
T ss_pred EEEeEccCCCcccccchhhhhCCccEEeeccCCCCCCcEEEecCcccccCCCCEEEEEEEEEEECCCeEEEE
Confidence 9999875420 0111223444221 134555433333345688999999998775 4 347999
No 347
>3u1s_H FAB PGT145 heavy chain; IGG, broadly neutralizing antibody, HIV-1 GP120, immune SYST; HET: TYS; 2.30A {Homo sapiens}
Probab=99.29 E-value=2e-11 Score=70.88 Aligned_cols=108 Identities=13% Similarity=0.310 Sum_probs=66.2
Q ss_pred CCccEEEEEEeccC--CCCeeEEeeCC--ccC-------C------------C---------CCCCeEEEecCCCCCCeE
Q psy12725 1 MLALKFFTCKYEGN--PVKTISWMKDG--KPV-------P------------D---------HNEPVFRIDSVRKEDKGM 48 (119)
Q Consensus 1 ~g~~~~l~c~~~~~--~~~~v~w~~~~--~~~-------~------------~---------~~~~~l~~~~~~~~d~g~ 48 (119)
.|+.|+|.|.+.+. ....+.|||.. ... . . ....+|.|.+++.+|+|.
T Consensus 37 ~G~~v~L~C~~s~~~~~~~~v~W~rq~~~~~~~~l~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~sL~I~~v~~~DsG~ 116 (267)
T 3u1s_H 37 PGSSVKVSCKASGNSFSNHDVHWVRQATGQGLEWMGWMSHEGDKTGLAQKFQGRVTITRDSGASTVYMELRGLTADDTAI 116 (267)
T ss_dssp TTCCEEEEEEEGGGGGGTSEEEEEEECTTSCCEEEEEECTTSSCEEECGGGTTTEEEEECGGGCCEEEEECSCCGGGCEE
T ss_pred CCCcEEEEEEeeCCccCCCEEEEEEECCCCCcEEEEEEeCCCCceecCcccCCcEEEEEcCCCCEEEEEECCCChhhCEE
Confidence 48999999999652 34678998732 110 0 0 012359999999999999
Q ss_pred EEEEEEc-------CC------------C------CceeEeeEEEe-eecCCCeeeecCCccccCCCCcEEEEeEEccC-
Q psy12725 49 YQCVIRN-------EQ------------E------SAQASGELKLG-GRFDPPVIKESFSDETLNPGPNYYFKCIASGN- 101 (119)
Q Consensus 49 y~C~~~~-------~~------------~------~~~~~~~~~v~-~~~~~~~~~~~~~~~~~~~g~~~~l~C~~~~~- 101 (119)
|.|.+.+ .. . .......+.|. ....+|.+...........|+.+.|.|.+.+.
T Consensus 117 Y~C~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~t~l~V~~~~~~~P~v~~~~~~~~~~~g~~~~l~C~~~~~~ 196 (267)
T 3u1s_H 117 YYCLTGSKHRLRDYFLYNEYGPNYEEWGDYLATLDVWGHGTAVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYF 196 (267)
T ss_dssp EEEEEEEEEEEEEEEECCTTSSCEEEEEEEEEEEEEECCCEEEEECCCCCBCCEEEEECCCGGGEETTEEEEEEEEEEEB
T ss_pred EEEEECcCCcccccccccccccccccccccccccceecCCeEEEecCCCCCCCEEEEecCCcccCCCCcEEEEEEEeEEE
Confidence 9999862 10 0 01112234443 11234555533333334578999999998774
Q ss_pred C-CCeEEE
Q psy12725 102 P-TPEISW 108 (119)
Q Consensus 102 p-~~~~~W 108 (119)
| .+.+.|
T Consensus 197 p~~~~v~W 204 (267)
T 3u1s_H 197 PEPVTVSW 204 (267)
T ss_dssp SSCCEEEE
T ss_pred CCCeEEEE
Confidence 4 347999
No 348
>2fbo_J V1V2;, variable region-containing chitin-binding protein 3; immunoglobulin, VCBP, V-type, V SET, immune system; 1.85A {Branchiostoma floridae}
Probab=99.29 E-value=5.6e-12 Score=72.06 Aligned_cols=59 Identities=14% Similarity=0.180 Sum_probs=49.5
Q ss_pred CccEEEEEEeccCCCCeeEEeeCCccCCCC------------------------------CCCeEEEecCCCCCCeEEEE
Q psy12725 2 LALKFFTCKYEGNPVKTISWMKDGKPVPDH------------------------------NEPVFRIDSVRKEDKGMYQC 51 (119)
Q Consensus 2 g~~~~l~c~~~~~~~~~v~w~~~~~~~~~~------------------------------~~~~l~~~~~~~~d~g~y~C 51 (119)
|+.+.|.|.+.+.|.+.+.|++++..+... ....|.|.+++.+|.|.|.|
T Consensus 151 g~~v~L~C~~~g~p~p~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C 230 (250)
T 2fbo_J 151 GNDITMTCPCTDCANANVTWYTGPTFFENYETGTYQPLANKNQFGITWFSSEIAGRASFSGARNLVIRAAKITDAGRVWC 230 (250)
T ss_dssp TCCEEECCCEESCTTCEEEEEEEEECSSCSSSCEEEEEEEECTTSCEEECTTTTTSEEEETTTEEEECSCCGGGCEEEEE
T ss_pred CCcEEEEEEecCCCCCeeEEEeCCCcccccccCcceeEeccCCCCccccCceEecccccCCccEEEEecCCcccCEEEEE
Confidence 899999999999888899999987655321 23689999999999999999
Q ss_pred EEEcCCCCc
Q psy12725 52 VIRNEQESA 60 (119)
Q Consensus 52 ~~~~~~~~~ 60 (119)
.+.|..+..
T Consensus 231 ~a~N~~g~~ 239 (250)
T 2fbo_J 231 ELATGQGEL 239 (250)
T ss_dssp EEESSSSGG
T ss_pred EecCCcccc
Confidence 999976543
No 349
>1hxm_A Gamma-delta T-cell receptor; IG domain, TCR, GDTCR, immune system; 3.12A {Homo sapiens} SCOP: b.1.1.1 b.1.1.2
Probab=99.29 E-value=4.8e-11 Score=67.98 Aligned_cols=107 Identities=17% Similarity=0.273 Sum_probs=66.8
Q ss_pred CCccEEEEEEeccCC--CCeeEEeeCC--ccCC------------CC-----------CCCeEEEecCCCCCCeEEEEEE
Q psy12725 1 MLALKFFTCKYEGNP--VKTISWMKDG--KPVP------------DH-----------NEPVFRIDSVRKEDKGMYQCVI 53 (119)
Q Consensus 1 ~g~~~~l~c~~~~~~--~~~v~w~~~~--~~~~------------~~-----------~~~~l~~~~~~~~d~g~y~C~~ 53 (119)
+|+.|+|.|.+.+.+ ...+.|||.. ..+. .. ....|.|.+++.+|+|.|.|.+
T Consensus 15 ~G~~vtL~C~~s~~~~~~~~v~W~rq~~g~~~~~l~~~~~~~~~~~~~R~~~~~~~~~~~~sL~I~~v~~~Dsg~Y~C~~ 94 (229)
T 1hxm_A 15 IGVPATLRCSMKGEAIGNYYINWYRKTQGNTMTFIYREKDIYGPGFKDNFQGDIDIAKNLAVLKILAPSERDEGSYYCAC 94 (229)
T ss_dssp TTCCEEEEEEECSSCGGGSEEEEEEEESSSCSEEEEETTTEECTTTTTTEEEEEEGGGTEEEEEESSCCGGGCEEEEEEE
T ss_pred CCCCEEEEeEecCCccCcceEEEEEECCCCCcEEEEEcCCccCCCcCCeEEEEEcCCCCEEEEEECcCCHhHCeEEEEEE
Confidence 489999999997544 4579999842 1110 00 1236899999999999999999
Q ss_pred EcCCC------C--ceeEeeEEEeee---cCCCeeeecCCccccCCCCcEEEEeEEccC-CCC-eEEEEECCEEcc
Q psy12725 54 RNEQE------S--AQASGELKLGGR---FDPPVIKESFSDETLNPGPNYYFKCIASGN-PTP-EISWYLDGKKLV 116 (119)
Q Consensus 54 ~~~~~------~--~~~~~~~~v~~~---~~~~~~~~~~~~~~~~~g~~~~l~C~~~~~-p~~-~~~W~~~~~~~~ 116 (119)
.+... . ......+.|... ..+|.+.... ....|.|.+.+. |.+ .+.|+++ ..+.
T Consensus 95 ~~~~~~~~~~~~~~~g~gt~L~V~~~~~~~~~P~v~~~~--------~~~~L~C~~~g~~P~~i~v~W~~~-~~~~ 161 (229)
T 1hxm_A 95 DTLGMGGEYTDKLIFGKGTRVTVEPRSQPHTKPSVFVMK--------NGTNVACLVKEFYPKDIRINLVSS-KKIT 161 (229)
T ss_dssp ECCCCSSSCCCCCEEBCCEEEEEECCSCCCBCCEEEEEE--------ETTEEEEEEESCBSSCCEEEEECS-SEEE
T ss_pred ecCCCcccccchhhcCccEEEEEeccCCCCcCCcEEEcC--------CCCeEEEEEEEEeCCCEEEEEecC-CEEe
Confidence 87531 1 112234444321 1133333211 124899999876 444 7999998 5553
No 350
>2iep_A Muscle-specific kinase receptor; beta-sandwich, signaling protein,transferase; 2.21A {Rattus norvegicus}
Probab=99.29 E-value=1.1e-11 Score=68.22 Aligned_cols=60 Identities=32% Similarity=0.619 Sum_probs=50.9
Q ss_pred CCccEEEEEEeccCCCCeeEEeeCCccCCCC------CCCeEEEecCCCCCCeEEEEEEEcCCCCc
Q psy12725 1 MLALKFFTCKYEGNPVKTISWMKDGKPVPDH------NEPVFRIDSVRKEDKGMYQCVIRNEQESA 60 (119)
Q Consensus 1 ~g~~~~l~c~~~~~~~~~v~w~~~~~~~~~~------~~~~l~~~~~~~~d~g~y~C~~~~~~~~~ 60 (119)
.|+.+.|.|.+.+.|.+.+.|++++..+... ....|.|..++..|.|.|.|.+.|..+..
T Consensus 114 ~g~~~~l~C~~~g~p~~~v~W~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~n~~g~~ 179 (192)
T 2iep_A 114 EGLKAVLPCTTMGNPKPSVSWIKGDSALRENSRIAVLESGSLRIHNVQKEDAGQYRCVAKNSLGTA 179 (192)
T ss_dssp TTSCEEECCEEEEESCCEEEEEETTEECCCCSSEEECTTSCEEESSCCGGGCEEEEEEEEETTEEE
T ss_pred CCCcEEEEEEEeccCCceEEEEeCCEEccCCCcEEEecCCcEEEecCChhhCEEEEEEEEcCCCcE
Confidence 3789999999999898999999998876542 34579999999999999999999986544
No 351
>4fa8_A Secreted protein BARF1; immunoglobulin-like domains, 4-helix bundle fold, viral PROT cytokine complex; HET: NAG BMA; 2.20A {Human herpesvirus 4} PDB: 2ch8_A* 3uez_A* 4adf_A* 4adq_A*
Probab=99.29 E-value=1.3e-11 Score=69.10 Aligned_cols=61 Identities=20% Similarity=0.245 Sum_probs=44.8
Q ss_pred CCccEEEEEEeccCCCCeeEEeeCCccCCC----------CCCCe---EEEecCCCCCCeEEEEEEEcCCCCce
Q psy12725 1 MLALKFFTCKYEGNPVKTISWMKDGKPVPD----------HNEPV---FRIDSVRKEDKGMYQCVIRNEQESAQ 61 (119)
Q Consensus 1 ~g~~~~l~c~~~~~~~~~v~w~~~~~~~~~----------~~~~~---l~~~~~~~~d~g~y~C~~~~~~~~~~ 61 (119)
.|+.+.|.|.+.|.|.|.|.|++++..+.. ..+.. +.+..++.+|.|.|+|.+.|..+...
T Consensus 120 ~g~~~~l~C~~~G~P~P~v~W~~~~~~~~~~~~~~~r~~~~~~g~l~il~i~~v~~~D~G~YtC~A~N~~G~a~ 193 (203)
T 4fa8_A 120 DFSVLTVTCTVNAFPHPHVQWLMPEGVEPAPTAANGGVMKEKDGSLSVAVDLSLPKPWHLPVTCVGKNDKEEAH 193 (203)
T ss_dssp CSCCEEEEEEEEEESCCEEEECCC------------CCEECTTSCEEEEEEEEECSSCCCCEEEEEESSSCEEE
T ss_pred CCCEEEEEEEcCCCCCCEEEEEECCeeecCcccccceEEEeCCCCEEEEEECCCCHHHCEEEEEEEEcCCCEEE
Confidence 388999999999999999999986543321 12233 34568899999999999999987654
No 352
>2id5_A Lingo-1, leucine rich repeat neuronal 6A; CNS-specific LRR-IG containing, ligand binding protein,membr protein; HET: NAG MAN; 2.70A {Homo sapiens}
Probab=99.28 E-value=9.9e-12 Score=77.31 Aligned_cols=68 Identities=19% Similarity=0.438 Sum_probs=54.9
Q ss_pred CCccEEEEEEeccCCCCeeEEeeCCccCCC---------CCCCeEEEecCCCCCCeEEEEEEEcCCCCceeEeeEEE
Q psy12725 1 MLALKFFTCKYEGNPVKTISWMKDGKPVPD---------HNEPVFRIDSVRKEDKGMYQCVIRNEQESAQASGELKL 68 (119)
Q Consensus 1 ~g~~~~l~c~~~~~~~~~v~w~~~~~~~~~---------~~~~~l~~~~~~~~d~g~y~C~~~~~~~~~~~~~~~~v 68 (119)
.|+.+.|.|.+.|.|.|.+.|++++..+.. .....+.|..++.+|.|.|+|.+.+..+.......+.|
T Consensus 399 ~G~~v~l~C~~~g~P~p~i~W~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~N~~g~~~~~~~l~V 475 (477)
T 2id5_A 399 EGHTVQFVCRADGDPPPAILWLSPRKHLVSAKSNGRLTVFPDGTLEVRYAQVQDNGTYLCIAANAGGNDSMPAHLHV 475 (477)
T ss_dssp TTCCEEECCCEEEESCCEEEEECTTSCBC-------CEECTTSCEEESSCCSTTCEEEEEEEEETTEEEEEEEEEEE
T ss_pred CCCeEEEEEeccccCCCEEEEEECCccccccCCCceEEeCCCCEEEEeeCChHHCEEEEEEEEeCCCcEEEEEEEEE
Confidence 489999999999999999999998866532 12467999999999999999999998766555555444
No 353
>3mbe_C I-AG7; T cell receptor, histocompatability antigen, MHC class II, I immune system; HET: NAG; 2.89A {Mus musculus}
Probab=99.28 E-value=3.7e-11 Score=68.29 Aligned_cols=111 Identities=13% Similarity=0.266 Sum_probs=70.1
Q ss_pred CCccEEEEEEeccCCCCeeEEeeC--CccCC---------------------CCCCCeEEEecCCCCCCeEEEEEEEcCC
Q psy12725 1 MLALKFFTCKYEGNPVKTISWMKD--GKPVP---------------------DHNEPVFRIDSVRKEDKGMYQCVIRNEQ 57 (119)
Q Consensus 1 ~g~~~~l~c~~~~~~~~~v~w~~~--~~~~~---------------------~~~~~~l~~~~~~~~d~g~y~C~~~~~~ 57 (119)
.|+.|+|.|.+.+. ...+.|||. +..+. ......|.|.+++.+|+|.|.|.+....
T Consensus 15 ~G~sVtL~C~~s~~-~~~v~Wyrq~pg~~~~~l~~~~~~~~~~~Rfs~~~~~~~~~~sLtI~~lq~~DSG~Y~Ca~~~~~ 93 (229)
T 3mbe_C 15 EGADSGLRCNFSTT-MKSVQWFQQNHRGRLITLFYLAQGTKENGRLKSTFNSKERYSTLHIKDAQLEDSGTYFCAAEDGG 93 (229)
T ss_dssp TTCCEEEEEEESSC-CSCEEEEEECSSSCBCCCEEESSEEEEETTEEEEEETTTTEEEEEECSCCSTTCBEEEEEEECSS
T ss_pred cCCCEEEEEEEeCC-CcEEEEEEECCCCCcEEEEEeCCCCccCCCEEEEECCCCCEEEEEEECCcccCCCCEEEEEEeCC
Confidence 48999999999876 568999983 22211 0123469999999999999999998532
Q ss_pred --C--CceeEeeEEEeeec--CCCeeeecCCccccCCCCcEEEEeEEccCCCC-eEEEEECCEEccc
Q psy12725 58 --E--SAQASGELKLGGRF--DPPVIKESFSDETLNPGPNYYFKCIASGNPTP-EISWYLDGKKLVN 117 (119)
Q Consensus 58 --~--~~~~~~~~~v~~~~--~~~~~~~~~~~~~~~~g~~~~l~C~~~~~p~~-~~~W~~~~~~~~~ 117 (119)
. .......+.|.... .+|.+-.... ....+++.|.+.+..+. .+.|++++..+..
T Consensus 94 ~~~~~~fG~GT~L~V~~~~~~p~P~Vf~~~~-----~~~~vtl~Cl~~gf~P~i~v~~~~~~~~~~~ 155 (229)
T 3mbe_C 94 SGNKLIFGTGTLLSVKPNIQNPEPAVYQLKD-----PRSQDSTLCLFTDFDSQINVPKTMESGTFIT 155 (229)
T ss_dssp STTCEEECCCCEEEEECCCSSCCCEEEEEEC-----TTCTTCEEEEEESCCSSSCCCCCCSSSEEEC
T ss_pred CcccceeCCCEEEEEecccCCCCCEEEEccC-----CCCCEEEEEEccccCCceEeEeeccCceEec
Confidence 1 11223345554321 1233222111 11348899999887444 7899988876643
No 354
>4frw_A Poliovirus receptor-related protein 4; immunoglobulin-like domain, IG domain, viral entry receptor, adhesion; 3.50A {Homo sapiens}
Probab=99.28 E-value=7.8e-12 Score=69.78 Aligned_cols=69 Identities=16% Similarity=0.202 Sum_probs=55.6
Q ss_pred CccEEEEEEeccCCCCeeEEeeCCccCCCC----------CCCeEEEecCCCCCCeEEEEEEEcCCCCceeEeeEEEee
Q psy12725 2 LALKFFTCKYEGNPVKTISWMKDGKPVPDH----------NEPVFRIDSVRKEDKGMYQCVIRNEQESAQASGELKLGG 70 (119)
Q Consensus 2 g~~~~l~c~~~~~~~~~v~w~~~~~~~~~~----------~~~~l~~~~~~~~d~g~y~C~~~~~~~~~~~~~~~~v~~ 70 (119)
|+.+.+.|.+.+.|.+.|.|++++..+... ..+.|.|..+...|.|.|+|.+.|..+.......+.+.+
T Consensus 133 ~~~~~~~c~~~g~p~p~i~W~~~~~~~~~~~~~~~~~~~~~~s~L~i~~~~~~d~g~YtC~a~N~~g~~~~~~t~~v~V 211 (218)
T 4frw_A 133 GLTLAASCTAEGSPAPSVTWDTEVKGTTSSRSFKHSRSAAVTSEFHLVPSRSMNGQPLTCVVSHPGLLQDQRITHILHV 211 (218)
T ss_dssp CSEEEEEEEEEEBSCCEEEEEESSCCEEEEEEEECSSSEEEEEEEEECCCGGGTTCEEEEEEECTTCSSCEEEEEECCE
T ss_pred ccccceeeeccCCcCceEEEEECCcccccCceEecCCcEEEEEEEEEeeCCHHhCeEEEEEEEeCCCCeEEEEEEEEEE
Confidence 678899999999999999999988655321 124688989999999999999999988776666666654
No 355
>3mj6_A Junctional adhesion molecule-like; immunoglobulin tandem domain, cell adhesion, cell junction, glycoprotein, immunoglobulin domain, membrane; HET: NAG FUC; 2.19A {Mus musculus} PDB: 3mj7_A* 3mj9_A*
Probab=99.28 E-value=1.4e-11 Score=71.13 Aligned_cols=89 Identities=18% Similarity=0.268 Sum_probs=51.5
Q ss_pred CCccEEEEEEe---ccCCCCeeEEeeCCcc-CC--------------------------------CCCCCeEEEecCCCC
Q psy12725 1 MLALKFFTCKY---EGNPVKTISWMKDGKP-VP--------------------------------DHNEPVFRIDSVRKE 44 (119)
Q Consensus 1 ~g~~~~l~c~~---~~~~~~~v~w~~~~~~-~~--------------------------------~~~~~~l~~~~~~~~ 44 (119)
.|+.+.|.|.+ .+.|.+.+.|++++.. .. ......|.|.+++.+
T Consensus 132 ~G~~v~L~C~~~~~~~~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~i~~v~~~ 211 (268)
T 3mj6_A 132 VGDTTQMRCSIQSTEEKRVTKVNWMFSSGSHTEEETVLSYDSNMRSGKFQSLGRFRNRVDLTGDISRNDGSIKLQTVKES 211 (268)
T ss_dssp TTCCEEECCBCEESSSSCCCEEEEEEECTTCSSCEEEEEEETTSSSCEEECSSTTTTTEEECSCGGGTBCCEEECSCCGG
T ss_pred cCCcEEEEEEecCCCCCCccceEEEecCCCCCcceeEEEecCCCCccccccccccccceEeeccCCCCeEEEEECcCChh
Confidence 48899999999 5668889999984221 00 023568999999999
Q ss_pred CCeEEEEEEEcCCCCceeEeeEEEeeecCCCeeeecCCccccCCCCc
Q psy12725 45 DKGMYQCVIRNEQESAQASGELKLGGRFDPPVIKESFSDETLNPGPN 91 (119)
Q Consensus 45 d~g~y~C~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~g~~ 91 (119)
|.|.|+|.+.|..+.......+.+. ..+|.+...+....+..++.
T Consensus 212 D~G~Y~C~a~n~~g~~~~~~~l~V~--~~~p~~~~~p~~~~~~~~q~ 256 (268)
T 3mj6_A 212 DQGIYTCSIYVGKLESRKTIVLHVV--QDEFQRTISPTPPTDKGQQG 256 (268)
T ss_dssp GCEEEEEEEEETTEEEEEEEEEEEE--CC------------------
T ss_pred hCeEEEEEEEcCCceEEEEEEEEEE--cCCCeeeeCCCCCCCCccee
Confidence 9999999999976554444555543 34565555554444444443
No 356
>1rhf_A Tyrosine-protein kinase receptor TYRO3; AXL/TYRO3 family, cellular adhesion, ligand-independent DIME mutational analysis, transferase; HET: EPE; 1.96A {Homo sapiens} SCOP: b.1.1.1 b.1.1.4
Probab=99.28 E-value=3.9e-11 Score=65.57 Aligned_cols=58 Identities=22% Similarity=0.382 Sum_probs=48.0
Q ss_pred CCccEEEEEEeccCCCC-eeEEeeCCccCCCC--CCCeEEEecCCCCCCeEEEEEEEcCCCCc
Q psy12725 1 MLALKFFTCKYEGNPVK-TISWMKDGKPVPDH--NEPVFRIDSVRKEDKGMYQCVIRNEQESA 60 (119)
Q Consensus 1 ~g~~~~l~c~~~~~~~~-~v~w~~~~~~~~~~--~~~~l~~~~~~~~d~g~y~C~~~~~~~~~ 60 (119)
.|+.+.|.|.+.+.|.+ .+.|++++..+... ....|.+.++ .|.|.|.|.+.|..+..
T Consensus 112 ~g~~~~l~C~~~g~p~p~~v~W~~~~~~~~~~~~~~~~L~i~~~--~d~G~Y~C~a~N~~g~~ 172 (182)
T 1rhf_A 112 PNAPFQLSCEAVGPPEPVTIVWWRGTTKIGGPAPSPSVLNVTGV--TQSTMFSCEAHNLKGLA 172 (182)
T ss_dssp TTCCEEEEEEEECSSSCCEEEEEETTEECSCSEESSEEEEECCC--SSCEEEEEEEEETTEEE
T ss_pred CCCEEEEEeEecCCCCCCEEEEEcCCeECCCCCCCceEEEEecc--ccCeEEEEEEECCCCCc
Confidence 48899999999999988 99999999887543 4567777776 58899999999986544
No 357
>1mq8_A ICAM-1, intercellular adhesion molecule-1, CD54 antigen; IG superfamily, rossmann fold, metal mediated protein interf immune system; HET: NAG; 3.30A {Homo sapiens} SCOP: b.1.1.3 b.1.1.4
Probab=99.27 E-value=4.3e-10 Score=66.18 Aligned_cols=112 Identities=15% Similarity=0.177 Sum_probs=69.8
Q ss_pred CCccEEEEEEeccCCCCe-eEEeeC-CccCC-CC--CCCeEEEecCCCCCCeEEEEEEEcCCCCceeEeeEEEeeecCCC
Q psy12725 1 MLALKFFTCKYEGNPVKT-ISWMKD-GKPVP-DH--NEPVFRIDSVRKEDKGMYQCVIRNEQESAQASGELKLGGRFDPP 75 (119)
Q Consensus 1 ~g~~~~l~c~~~~~~~~~-v~w~~~-~~~~~-~~--~~~~l~~~~~~~~d~g~y~C~~~~~~~~~~~~~~~~v~~~~~~~ 75 (119)
.|+.+.|.|.+.- +.+. +.|... ++... .. ....+.+.+++.. +.|.|.+..........+.+.+. ..|.
T Consensus 13 ~G~sv~l~Cs~~c-~~p~~~~~~t~l~~~~~~~~g~~~~~~~l~~v~~~--~~y~C~~~~~~~~~~~~v~l~V~--~~P~ 87 (291)
T 1mq8_A 13 RGGSVLVTCSTSC-DQPKLLGIETPLPKKELLLPGNNRKVYELSNVQED--SQPMCYSNCPDGQSTAKTFLTVY--WTPE 87 (291)
T ss_dssp TTCEEEEEEEECC-SSCSEEEEECSSCCCCCCCSCSSEEEEEEESCCSC--CCCEEEEECSSCEEEEECEEEEC--BCCS
T ss_pred CCCeEEEEEeCCC-CCCccceEEecCCCcccccCCCceEEEEEEecccC--CeEEEEEEcCCccEEEEEEEEEe--cCCC
Confidence 4999999999964 5444 888532 11111 11 1224677776643 46999997654333334444443 3333
Q ss_pred eeeecCCccccCCCCcEEEEeEEccC-CCC--eEEEEECCEEccc
Q psy12725 76 VIKESFSDETLNPGPNYYFKCIASGN-PTP--EISWYLDGKKLVN 117 (119)
Q Consensus 76 ~~~~~~~~~~~~~g~~~~l~C~~~~~-p~~--~~~W~~~~~~~~~ 117 (119)
.+.+.+....+.+|+.++|.|.+.+. |.. .+.|+|+++.+..
T Consensus 88 ~v~I~~~~~~~~~G~~~~LtC~v~g~~P~~~l~itW~kg~~~l~~ 132 (291)
T 1mq8_A 88 RVELAPLPSWQPVGKNLTLRCQVEGGAPRANLTVVLLRGEKELKR 132 (291)
T ss_dssp CCCBCCCCSBCCSSCCCEEEEEECCCBSTTTEEEEEESSSSEEEE
T ss_pred CCEEecCCccccCCCCEEEEEEecCccCCCCcEEEEEECCEEeec
Confidence 34443334458899999999998776 433 5899999987753
No 358
>3zyj_A Leucine-rich repeat-containing protein 4C; cell adhesion, synapse; HET: NAG BMA MAN; 3.25A {Homo sapiens}
Probab=99.26 E-value=1.8e-11 Score=75.56 Aligned_cols=69 Identities=20% Similarity=0.467 Sum_probs=54.5
Q ss_pred CCccEEEEEEeccCCCCeeEEeeCCcc-CCC---------CCCCeEEEecCCCCCCeEEEEEEEcCCCCceeEeeEEEee
Q psy12725 1 MLALKFFTCKYEGNPVKTISWMKDGKP-VPD---------HNEPVFRIDSVRKEDKGMYQCVIRNEQESAQASGELKLGG 70 (119)
Q Consensus 1 ~g~~~~l~c~~~~~~~~~v~w~~~~~~-~~~---------~~~~~l~~~~~~~~d~g~y~C~~~~~~~~~~~~~~~~v~~ 70 (119)
.|+.++|.|.+ +.|.+.+.|++++.. +.. ....+|.|.+++.+|.|.|+|.+.|..+.......+.+..
T Consensus 355 ~G~~v~L~C~~-~~p~p~i~W~~~~~~~~~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~N~~G~~~~~~~~~v~~ 433 (440)
T 3zyj_A 355 EGMAAELKCRA-STSLTSVSWITPNGTVMTHGAYKVRIAVLSDGTLNFTNVTVQDTGMYTCMVSNSVGNTTASATLNVTG 433 (440)
T ss_dssp TTSCCEECCEE-SSTTSEEEEECTTSCEEESSSCCSSEEECTTCCEEESSCCSTTCEEEEEEEECSSCEEEEEEEEEEC-
T ss_pred cCceEEEEeec-CCCCCceEEEeCCCceeeccCCCceEEEccCCeEEEccCChhhCEEEEEEEEcCCCcEEEEEEEEEec
Confidence 48999999999 568899999985432 211 1246799999999999999999999988877777777754
No 359
>2v5y_A Receptor-type tyrosine-protein phosphatase MU; membrane, hydrolase, glycoprotein, receptor protei tyrosine phosphatase, cell adhesion; HET: NAG; 3.10A {Homo sapiens}
Probab=99.26 E-value=5.6e-11 Score=77.42 Aligned_cols=111 Identities=19% Similarity=0.309 Sum_probs=75.4
Q ss_pred ccEEEEEEeccCCCCeeEEeeCCccCCCCCCCeEEEecCCCCC-CeEEEEEEEcCCCCceeEeeEEEee--ecCCCeeee
Q psy12725 3 ALKFFTCKYEGNPVKTISWMKDGKPVPDHNEPVFRIDSVRKED-KGMYQCVIRNEQESAQASGELKLGG--RFDPPVIKE 79 (119)
Q Consensus 3 ~~~~l~c~~~~~~~~~v~w~~~~~~~~~~~~~~l~~~~~~~~d-~g~y~C~~~~~~~~~~~~~~~~v~~--~~~~~~~~~ 79 (119)
..+.+.|.+.|.|.+.+.|.+++..........+.+..+...+ .+.|.|.+.+..+.... ..+.+.. ...+|.+.
T Consensus 92 g~l~v~c~~~g~P~p~i~W~k~g~~~~~~~~~~~~i~~~~~~~~~l~~~~va~~~~G~~~~-~~v~~~~~~~~~~p~~~- 169 (731)
T 2v5y_A 92 GLLNVYVKVNNGPLGNPIWNISGDPTRTWNRAELAISTFWPNFYQVIFEVITSGHQGYLAI-DEVKVLGHPCTRTPHFL- 169 (731)
T ss_dssp EEEEEEEEETTCCCCSEEEEECCCCCSSCEEEEEEECCCTTSCEEEEEEEEECSSCCEEEE-CCBEEESSCCSSSCEEC-
T ss_pred ceEEEEEecCCCCccceeEEEeCCcCCceeEEEEEEeecCCCceEEEEEEEecCCceEEEE-eeEEeeecccccccccc-
Confidence 4788999999999999999999987644334445555442333 37889977666554332 2222221 11356665
Q ss_pred cCCccccCCCCcEEEEeEEccCCCCeEE-EE--ECCEEc
Q psy12725 80 SFSDETLNPGPNYYFKCIASGNPTPEIS-WY--LDGKKL 115 (119)
Q Consensus 80 ~~~~~~~~~g~~~~l~C~~~~~p~~~~~-W~--~~~~~~ 115 (119)
.+....+..|+.+.|.|.+.|.|.|.+. |+ ++|..+
T Consensus 170 ~~~~~~v~~G~~v~l~C~~~g~P~p~i~~W~~~~~g~~l 208 (731)
T 2v5y_A 170 RIQNVEVNAGQFATFQCSAIGRTVAGDRLWLQGIDVRDA 208 (731)
T ss_dssp CCCCEEEETTSCEEEEEEEESCCCTTCEEEEEESSSCCE
T ss_pred cccceEEeCCCcEEEEEEeCCCCCCceeEEEecCCCccc
Confidence 3445678899999999999999998876 88 677654
No 360
>2x1w_L Vascular endothelial growth factor receptor 2; hormone-signaling protein complex, angiogenesis, glycoprotein, HOST-virus interaction, membrane; HET: NAG BMA; 2.70A {Homo sapiens} PDB: 2x1x_R*
Probab=99.26 E-value=1.8e-11 Score=68.75 Aligned_cols=69 Identities=14% Similarity=0.262 Sum_probs=52.2
Q ss_pred CCccEEEEEEeccCC--CCeeEEeeCCccCCCC-----------------CCCeEEEecCCCCCCeEEEEEEEcCCCCce
Q psy12725 1 MLALKFFTCKYEGNP--VKTISWMKDGKPVPDH-----------------NEPVFRIDSVRKEDKGMYQCVIRNEQESAQ 61 (119)
Q Consensus 1 ~g~~~~l~c~~~~~~--~~~v~w~~~~~~~~~~-----------------~~~~l~~~~~~~~d~g~y~C~~~~~~~~~~ 61 (119)
.|+.++|.|.+.+.| .+.+.|++++..+... ....|.|.+++.+|.|.|+|.+.|..+...
T Consensus 119 ~G~~v~L~C~~~g~p~~~~~i~W~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~N~~g~~~ 198 (213)
T 2x1w_L 119 VGEKLVLNCTARTELNVGIDFNWEYPSSKHQHKKLVNRDLKTQSGSEMKKFLSTLTIDGVTRSDQGLYTCAASSGLMTKK 198 (213)
T ss_dssp TTCCEEEEEEEEECTTBCCEEEEECSCSSCCSEEEEEEEECCCSSCSCEEEEEEEEESSCCGGGCEEEEEEEECSSCEEE
T ss_pred CCCCEEEEEEEECCCCCceEEEEEecCCccceEEEeccccccccCccceeeeEEEEECCCCcccCEEEEEEEecCCCcEE
Confidence 489999999998754 3479999988653210 023489999999999999999999887665
Q ss_pred eEeeEEEe
Q psy12725 62 ASGELKLG 69 (119)
Q Consensus 62 ~~~~~~v~ 69 (119)
....+.|.
T Consensus 199 ~~~~l~V~ 206 (213)
T 2x1w_L 199 NSTFVRVH 206 (213)
T ss_dssp EEEEEEEE
T ss_pred EEEEEEEe
Confidence 55555553
No 361
>4hwn_A FC receptor-like A; FCRLA, FCRL, IG-C2 domain, IG superfamily, immune system, ST genomics, PSI-biology; 2.01A {Homo sapiens}
Probab=99.26 E-value=2.2e-11 Score=61.72 Aligned_cols=57 Identities=21% Similarity=0.343 Sum_probs=43.5
Q ss_pred CCccEEEEEEeccCCCC-----eeEEeeCCccCCC-CCCCeEEEecCCCCCCeEEEEEEEcCC
Q psy12725 1 MLALKFFTCKYEGNPVK-----TISWMKDGKPVPD-HNEPVFRIDSVRKEDKGMYQCVIRNEQ 57 (119)
Q Consensus 1 ~g~~~~l~c~~~~~~~~-----~v~w~~~~~~~~~-~~~~~l~~~~~~~~d~g~y~C~~~~~~ 57 (119)
.|+.|+|.|.....+.. .+.|+|++..+.. .....+.|..++..|.|.|.|.+.+..
T Consensus 21 ~G~~VtL~C~~~~~~~~~~~~~~~~w~k~g~~l~~~~~~~~l~i~~v~~~dsG~Y~C~~~~~~ 83 (108)
T 4hwn_A 21 AGSPMTLSCQTKLPLQRSAARLLFSFYKDGRIVQSRGLSSEFQIPTASEDHSGSYWCEAATED 83 (108)
T ss_dssp TTCCEEEEEEC---------CCEEEEEETTEEEEEEESCCEEEESSCCGGGCEEEEEEEECTT
T ss_pred CCCcEEEEEcccCCCCCcCcceEEEEEECCcCccCCCcccEEEeCccCcccCeEEEEEEEeCC
Confidence 38999999999764433 4999999987642 346789999999999999999999864
No 362
>2vsd_A CHIR AB1; immune system receptor, FC receptor; HET: NAG NDG MAN; 1.82A {Gallus gallus}
Probab=99.26 E-value=2e-11 Score=61.56 Aligned_cols=55 Identities=16% Similarity=0.253 Sum_probs=44.6
Q ss_pred CCccEEEEEEeccCCCCeeEEeeCCccCC------CCCCCeEEEecCCCCCCeEEEEEEEcC
Q psy12725 1 MLALKFFTCKYEGNPVKTISWMKDGKPVP------DHNEPVFRIDSVRKEDKGMYQCVIRNE 56 (119)
Q Consensus 1 ~g~~~~l~c~~~~~~~~~v~w~~~~~~~~------~~~~~~l~~~~~~~~d~g~y~C~~~~~ 56 (119)
.|+.|+|.|...+. ...+.|||++..+. ......|.|..++.+|.|.|.|.+.+.
T Consensus 18 ~G~~VtL~C~~~~~-~~~~~w~k~g~~~~~~~~~~~~~~~~l~I~~v~~~dsG~Y~C~~~n~ 78 (105)
T 2vsd_A 18 LGDTVTLRCHLPRM-AAWVQLWLNGTLRFDKEKDKEQDAAEFSFAVTNLEDAGTYQCRYQVS 78 (105)
T ss_dssp TTCEEEEEEECCSS-CEEEEEEETTEEEEEEEECTTCSEEEEEEECCSGGGCEEEEEEEEEE
T ss_pred cCCCEEEEEEcCCC-CcEEEEEECCccceeeeccCCCCEEEEEECCCCHHHCeEEEEEEEcC
Confidence 38999999999764 45788999986542 234567999999999999999999875
No 363
>3r4d_A CEA-related cell adhesion molecule 1, isoform 1/2; immunoglobulin, beta-sandwich, mceacam1A - immunoglobulin FO spike NTD - galectin-like beta-sandwich fold; HET: NAG; 3.10A {Mus musculus} PDB: 1l6z_A*
Probab=99.25 E-value=4.8e-11 Score=66.48 Aligned_cols=68 Identities=29% Similarity=0.507 Sum_probs=54.1
Q ss_pred CCccEEEEEEeccCCCCeeEEeeCCccCCCC-------CCCeEEEecCCCCCCeEEEEEEEcCCCCceeEeeEEEee
Q psy12725 1 MLALKFFTCKYEGNPVKTISWMKDGKPVPDH-------NEPVFRIDSVRKEDKGMYQCVIRNEQESAQASGELKLGG 70 (119)
Q Consensus 1 ~g~~~~l~c~~~~~~~~~v~w~~~~~~~~~~-------~~~~l~~~~~~~~d~g~y~C~~~~~~~~~~~~~~~~v~~ 70 (119)
.|+.+.|.|.+.+.| +.+.|++++..+... ....|.|..++..|.|.|+|.+.|..+... +..+.+.+
T Consensus 124 ~g~~v~l~C~~~~~p-p~i~W~~~g~~l~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~N~~g~~~-s~~~~l~v 198 (208)
T 3r4d_A 124 ELDSVTLTCLSNDIG-ANIQWLFNSQSLQLTERMTLSQNNSILRIDPIKREDAGEYQCEISNPVSVRR-SNSIKLDI 198 (208)
T ss_dssp TTCCEEEEEECSCTT-CEEEEEETTEECCCCSSEEEETTTTEEEESSCCGGGCEEEEEEEECTTCCEE-CCCEEECC
T ss_pred eCCCEEEEEECCCCC-CceEEEECCEeCCCCCCeEEcCCCCEEEEeccCHHhCeEEEEEEecCCCccc-CCceeeeE
Confidence 388999999998865 799999999877532 347899999999999999999999876643 44455443
No 364
>1fnl_A Low affinity immunoglobulin gamma FC region receptor III-B; beta sandwich, immunoglobulin-like, immune system receptor; 1.80A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 PDB: 1e4j_A 1e4k_C* 1t83_C* 1t89_C* 3ay4_C*
Probab=99.25 E-value=1.4e-11 Score=67.23 Aligned_cols=57 Identities=19% Similarity=0.302 Sum_probs=48.1
Q ss_pred CCccEEEEEEeccCCC-CeeEEeeCCccCCC-CCCCeEEEecCCCCCCeEEEEEEEcCC
Q psy12725 1 MLALKFFTCKYEGNPV-KTISWMKDGKPVPD-HNEPVFRIDSVRKEDKGMYQCVIRNEQ 57 (119)
Q Consensus 1 ~g~~~~l~c~~~~~~~-~~v~w~~~~~~~~~-~~~~~l~~~~~~~~d~g~y~C~~~~~~ 57 (119)
.|+.+.|.|.+.+.+. +.+.|++++..+.. .....|.|.+++.+|.|.|.|.+.|..
T Consensus 102 ~g~~~~l~C~~~~~~~~~~~~W~k~g~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~n~~ 160 (175)
T 1fnl_A 102 EEDPIHLRCHSWKNTALHKVTYLQNGKDRKYFHHNSDFHIPKATLKDSGSYFCRGLVGS 160 (175)
T ss_dssp TTCCEEEEEEECTTCCCEEEEEEETTEEEEEEEECCCEEESSCCGGGCEEEEEEEEETT
T ss_pred CCCCEEEEEEcCCCCCceEEEEEECCeEccCCCCCCEEEEcccChhhCeEEEEEEEcCC
Confidence 3889999999987654 49999999987643 246789999999999999999999964
No 365
>3bp6_B Programmed cell death 1 ligand 2; PD-1, PD-L2, complex, costimulation, glycoprotein, immunoglo domain, membrane, transmembrane, receptor; 1.60A {Mus musculus} PDB: 3bp5_B 3rnq_B 3bov_A 3rnk_B
Probab=99.25 E-value=2.1e-11 Score=67.78 Aligned_cols=68 Identities=16% Similarity=0.300 Sum_probs=52.4
Q ss_pred CccEEEEEEeccCCCCeeEEeeCCccCCC-----CCC--CeEEEecCCCCCCeEEEEEEEcCCCCceeEeeEEEe
Q psy12725 2 LALKFFTCKYEGNPVKTISWMKDGKPVPD-----HNE--PVFRIDSVRKEDKGMYQCVIRNEQESAQASGELKLG 69 (119)
Q Consensus 2 g~~~~l~c~~~~~~~~~v~w~~~~~~~~~-----~~~--~~l~~~~~~~~d~g~y~C~~~~~~~~~~~~~~~~v~ 69 (119)
|+.+.|.|.+.+.|.+.+.|++++..+.. ..+ ..+.+..++..|.|.|+|.+.|..+.......+.+.
T Consensus 118 g~~v~l~C~~~g~P~p~v~W~~~~~~~~~~~~~~~~~~~~~~~i~~v~~~d~G~Y~C~a~N~~g~~~~~~~l~v~ 192 (202)
T 3bp6_B 118 TGEVQLTCQARGYPLAEVSWQNVSVPANTSHIRTPEGLYQVTSVLRLKPQPSRNFSCMFWNAHMKELTSAIIDPL 192 (202)
T ss_dssp TCCEEEEEEEEEBSCCEEEETTCCSCCEEEEEECTTSCEEEEEEEEECCCTTCCEEEEEEETTTTEEEEEEECC-
T ss_pred CCeEEEEEEccccCCceEEEEeCCCCccCceeeCCCCCEEEEEEEEEEcCCCCEEEEEEEcCCcccccEEEEEec
Confidence 78999999999999999999998765421 111 345667888999999999999998877666655553
No 366
>3ry4_A Low affinity immunoglobulin gamma FC region recep; FC receptor, CD32, immunoglobulin superfamily, low responder polymorphism, cell membrane; HET: NAG; 1.50A {Homo sapiens} PDB: 1fcg_A 3ry5_A 1h9v_A 3d5o_F* 3ry6_C* 2fcb_A
Probab=99.25 E-value=2e-11 Score=66.11 Aligned_cols=58 Identities=19% Similarity=0.375 Sum_probs=48.6
Q ss_pred CCccEEEEEEec-cCCCCeeEEeeCCccCCC-CCCCeEEEecCCCCCCeEEEEEEEcCCC
Q psy12725 1 MLALKFFTCKYE-GNPVKTISWMKDGKPVPD-HNEPVFRIDSVRKEDKGMYQCVIRNEQE 58 (119)
Q Consensus 1 ~g~~~~l~c~~~-~~~~~~v~w~~~~~~~~~-~~~~~l~~~~~~~~d~g~y~C~~~~~~~ 58 (119)
.|+.+.|.|.+. +.|.+.+.|++++..+.. .....|.|..++..|.|.|.|.+.|..+
T Consensus 99 ~g~~~~l~C~~~~~~p~~~~~W~~~g~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~n~~g 158 (170)
T 3ry4_A 99 EGETIMLRCHSWKDKPLVKVTFFQNGKSQKFSHLDPTFSIPQANHSHSGDYHCTGNIGYT 158 (170)
T ss_dssp TTCCEEEEEEEGGGCCEEEEEEEETTEEEEEESSCCEEEESSCCGGGCEEEEEEEEETTE
T ss_pred cCCeEEEEEECCCCCCCceEEEEECCeEccccCCCCeEEEEeccccCCEEEEEEEEeCcC
Confidence 388999999994 446689999999987643 3467899999999999999999999764
No 367
>1jbj_A CD3 epsilon and gamma ectodomain fragment complex; beta-sheet, C2-SET immunoglobulin superfamily, H-bonded G strand PAIR, single-chain; NMR {Mus musculus} SCOP: b.1.1.4 b.1.1.4 PDB: 1xmw_A
Probab=99.25 E-value=5.1e-12 Score=69.71 Aligned_cols=55 Identities=27% Similarity=0.508 Sum_probs=47.3
Q ss_pred CCccEEEEEEeccCCCCeeEEeeCCccCCC--CCCCeEEEecCCCCCCeEEEEEEEcCCC
Q psy12725 1 MLALKFFTCKYEGNPVKTISWMKDGKPVPD--HNEPVFRIDSVRKEDKGMYQCVIRNEQE 58 (119)
Q Consensus 1 ~g~~~~l~c~~~~~~~~~v~w~~~~~~~~~--~~~~~l~~~~~~~~d~g~y~C~~~~~~~ 58 (119)
.|+.+.|.|.+ |.+.+.|+|++..+.. .....|.|..+..+|.|.|+|.+.|..+
T Consensus 121 ~G~~v~l~C~~---p~p~i~W~k~g~~i~~~~~~~~~L~i~~v~~~D~G~Y~C~a~N~~g 177 (186)
T 1jbj_A 121 GDGSVLLTCGL---TDKTIKWLKDGSIISPLNATKNTWNLGNNAKDPRGTYQCQGAKETS 177 (186)
T ss_dssp SSCEEEEECSS---SCSCEEEEETTEECCCSSCCSSCCEEEETTSCCEEEEEEEESSCEE
T ss_pred CCCeEEEEeeC---CCCeEEEEECCEECcccCCCcceEEECCCCcCcCEEEEEEEEcCcC
Confidence 37899999988 7789999999998753 3567899999999999999999998754
No 368
>2vr9_A Roundabout 1, ROBO; immunoglobulin-like domain, AXON guidance, cell adhesion, immunoglobulin domain; 3.2A {Drosophila melanogaster} PDB: 2vra_A*
Probab=99.25 E-value=1.4e-11 Score=69.16 Aligned_cols=64 Identities=28% Similarity=0.507 Sum_probs=52.5
Q ss_pred CCccEEEEEEe-ccCCCCeeEEeeCCccCCCC--------------CCCeEEEecCCCCCCeEEEEEEEcCCCCceeEe
Q psy12725 1 MLALKFFTCKY-EGNPVKTISWMKDGKPVPDH--------------NEPVFRIDSVRKEDKGMYQCVIRNEQESAQASG 64 (119)
Q Consensus 1 ~g~~~~l~c~~-~~~~~~~v~w~~~~~~~~~~--------------~~~~l~~~~~~~~d~g~y~C~~~~~~~~~~~~~ 64 (119)
.|+.+.|.|.+ .+.|.+.+.|++++..+... ....|.|..++.+|.|.|.|.+.|..+......
T Consensus 122 ~g~~v~l~C~~~~g~p~~~v~W~~~g~~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~N~~G~~~~~~ 200 (217)
T 2vr9_A 122 KGETALLECGPPKGIPEPTLIWIKDGVPLDDLKAMSFGASSRVRIVDGGNLLISNVEPIDEGNYKCIAQNLVGTRESSY 200 (217)
T ss_dssp TTSCEEECCBCCCEESCCEEEEEETTEEECCCCCC---CCCSEEEETTTEEEESSCCSTTCEEEEEEEEETTEEEECCC
T ss_pred CCCeEEEEEECCCCCCCCeEEEEECCcCCCcccccccccCCcEEecCCCcEEEeeCCHHHCeEEEEEEEcccceecccc
Confidence 38899999998 78899999999998876521 235799999999999999999999876554443
No 369
>1sy6_A T-cell surface glycoprotein CD3 gamma/epsilon chain; CD3 epsilon, OKT3 FAB, signaling protein/antibiotic complex; 2.10A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 PDB: 2atp_E*
Probab=99.24 E-value=5.1e-12 Score=70.72 Aligned_cols=56 Identities=21% Similarity=0.431 Sum_probs=47.6
Q ss_pred CccEEEEEEeccCCCCeeEEeeCCccCCCC--------CCCeEEEecC-CCCCCeEEEEEEEcCCCC
Q psy12725 2 LALKFFTCKYEGNPVKTISWMKDGKPVPDH--------NEPVFRIDSV-RKEDKGMYQCVIRNEQES 59 (119)
Q Consensus 2 g~~~~l~c~~~~~~~~~v~w~~~~~~~~~~--------~~~~l~~~~~-~~~d~g~y~C~~~~~~~~ 59 (119)
|+.+.|.|. +.|.+.+.|++++..+... ....|.|.++ +..|.|.|+|.+.|..+.
T Consensus 128 G~~v~L~C~--g~p~p~i~W~k~~~~l~~~~~~~~~~~~~~~L~I~~v~~~~D~G~Y~C~A~N~~g~ 192 (204)
T 1sy6_A 128 GTTVILTCP--QYPGSEILWQHNDKNIGGDEDDKNIGSDEDHLSLKEFSELEQSGYYVCYPRGSKPE 192 (204)
T ss_dssp TTEEEEECS--CCCSSCEEEEETTEEESCCTTCTTEEEETTEEEETTCCHHHHCEEEEEEETTSCGG
T ss_pred CCcEEEEcC--CCCCCceEEEECCEECCCccCCceEecCCCEEEEeeCCccccCEEEEEEeccCCCC
Confidence 889999998 6788899999999876432 2568999999 999999999999998764
No 370
>4ei6_A Valpha1 XV19 type II natural killer T cell recept variable domain, human constant...; natural killer T cell receptor, immune system; 1.60A {Mus musculus} PDB: 4ei5_C 4elk_A 4elm_E* 3qeu_A 1ao7_D 3qdj_D 3qdg_D 3qfj_D 1qsf_D 1qse_D* 3d39_D* 3d3v_D* 3h9s_D 3pwp_D 2gj6_D 3utp_D* 3uts_D 1qrn_D 3hg1_D 3rdt_A ...
Probab=99.24 E-value=2.9e-11 Score=67.83 Aligned_cols=112 Identities=9% Similarity=0.139 Sum_probs=68.4
Q ss_pred CCccEEEEEEeccCCCCeeEEeeCC--ccCC----------------------CCCCCeEEEecCCCCCCeEEEEEEEcC
Q psy12725 1 MLALKFFTCKYEGNPVKTISWMKDG--KPVP----------------------DHNEPVFRIDSVRKEDKGMYQCVIRNE 56 (119)
Q Consensus 1 ~g~~~~l~c~~~~~~~~~v~w~~~~--~~~~----------------------~~~~~~l~~~~~~~~d~g~y~C~~~~~ 56 (119)
.|+.|+|.|.+.+.....+.|||.. +.+. ......|.|.+++.+|+|.|.|.+...
T Consensus 16 ~G~sVtL~C~~s~~~~~~v~Wyrq~~g~~~~~li~~~~~~~~~~~Rfs~~~~~~~~~~sL~I~~lq~~DsG~Y~Ca~~~~ 95 (208)
T 4ei6_A 16 EGGMASLNCTSSDRNFQYFWWYRQHSGEGPKALMSIFSDGDKKEGRFTAHLNKASLHVSLHIRDSQPSDSALYFCAASEQ 95 (208)
T ss_dssp TTCCEECEEEECCTTEEEEEEEEECTTSCCEEEEECCSSEEEEETTEEEEEBTTTTBC-CEECSCCGGGCEEEEEEEEEC
T ss_pred CCCCEEEEEEEcCCCCceEEEEEeCCCCCcEEEEEECCCCcccCCcEEEEEcCCCCEEEEEEEeCcccCCCcEEEEEecC
Confidence 4899999999986544578999732 1110 112357899999999999999998743
Q ss_pred C-----CCceeEeeEEEeee--cCCCeeeecCCccccCCCCcEEEEeEEccCCCC-eEEEEECCEEccc
Q psy12725 57 Q-----ESAQASGELKLGGR--FDPPVIKESFSDETLNPGPNYYFKCIASGNPTP-EISWYLDGKKLVN 117 (119)
Q Consensus 57 ~-----~~~~~~~~~~v~~~--~~~~~~~~~~~~~~~~~g~~~~l~C~~~~~p~~-~~~W~~~~~~~~~ 117 (119)
. ........+.|... ..+|.+-..... . ..++|.|.+.+.++. .+.|.++|..+..
T Consensus 96 ~~~~~~~~fG~GT~L~V~~~~~~~~PsVf~l~~~---~--~~~tl~Cl~~~f~P~i~v~~~~~~~~~~~ 159 (208)
T 4ei6_A 96 NNYAQGLTFGLGTRVSVFPYIQNPDPAVYQLRDS---K--SSDKSVCLFTDFDSQTNVSQSKDSDVYIT 159 (208)
T ss_dssp CSSCCCCEECCCEEEEEECCCSSCCCEEEEEEBS---S--CTTCEEEEEESCCTTCCCCCCSSTTCEEC
T ss_pred CCccccccCCCCEEEEEeCcccCCCCEEEEcccC---C--CCceEEEEeeccCCceEeeecccCcEEEe
Confidence 1 11223345555432 122333221111 1 225788999887544 6899988765543
No 371
>2zg1_A Sialic acid-binding IG-like lectin 5; siglec-5 inhibitory receptor, two-domain structure, V-SET, C2-SET, IG-like domain, 6'-sialyllactose complex; HET: SIA; 2.70A {Homo sapiens} PDB: 2zg3_A* 2zg2_A
Probab=99.23 E-value=1.1e-10 Score=65.36 Aligned_cols=68 Identities=13% Similarity=0.286 Sum_probs=49.4
Q ss_pred CCccEEEEEEeccC----CCCeeEEeeCCccCCC---CCCCeEEEecCCCCCCeEEEEEEEcCCCCceeEeeEEE
Q psy12725 1 MLALKFFTCKYEGN----PVKTISWMKDGKPVPD---HNEPVFRIDSVRKEDKGMYQCVIRNEQESAQASGELKL 68 (119)
Q Consensus 1 ~g~~~~l~c~~~~~----~~~~v~w~~~~~~~~~---~~~~~l~~~~~~~~d~g~y~C~~~~~~~~~~~~~~~~v 68 (119)
.|+.++|.|.+.+. |.+.+.|++++..... .....|.|..+...|.|.|+|.+.|..+.......+.+
T Consensus 137 ~G~~v~L~C~~~~~~~~~p~p~v~W~~~~~~~~~~~~~~~~~L~i~~~~~~~~g~Y~C~a~n~~~~~~~~~~v~l 211 (214)
T 2zg1_A 137 SGRPTRLSCSLPGSCEAGPPLTFSWTGNALSPLDPETTRSSELTLTPRPEDHGTNLTCQMKRQGAQVTTERTVQL 211 (214)
T ss_dssp TTCCEEEEEECTTCCSCSSCCEEEEESSTTSSSCSSCCCSSEEEECCCTTCCSCEEEEEEECC----CCEEEEEC
T ss_pred CCCeEEEEEEeccCCCCCCCceEEEeCCCCccCCCCceeEEEEEEecccHHcCcEEEEEEEeCCCCcceEEEEEE
Confidence 38899999999764 7789999998865422 24578999989889999999999997544333444443
No 372
>1ntl_A CRRY-IG; immunology, complement, glycoprotein, SCR, CCP, immune system; NMR {Mus musculus}
Probab=99.23 E-value=2.2e-10 Score=72.66 Aligned_cols=114 Identities=12% Similarity=0.133 Sum_probs=73.3
Q ss_pred CccEEEEEEeccCCC----CeeEEeeCCccCCCC--------CC------CeEEEecCCCCCCeEEEEEEEcCCCCcee-
Q psy12725 2 LALKFFTCKYEGNPV----KTISWMKDGKPVPDH--------NE------PVFRIDSVRKEDKGMYQCVIRNEQESAQA- 62 (119)
Q Consensus 2 g~~~~l~c~~~~~~~----~~v~w~~~~~~~~~~--------~~------~~l~~~~~~~~d~g~y~C~~~~~~~~~~~- 62 (119)
+..+.|.|.+.+... ..|+|++++..+... .+ +.|.+......|.+.|+|.+.+.......
T Consensus 358 ~~~~~l~C~~~~~~p~~~~i~v~W~~~~~~~~~~~t~~~~~~~n~~~~~~s~L~i~~~~~~~~~~y~C~v~~~~~~~~~~ 437 (551)
T 1ntl_A 358 TLTPKVTCVVVDISKDDPEVQFSWFVDDVEVHTAQTQPREEQFNSTFRSVSELPIMHQDWLNGKEFKCRVNSAAFPAPIE 437 (551)
T ss_pred ccCcceEEEEEecccCCCceEEEEEECCccccccccCCceECCCCeEEEEEeeEcCHHHccCCceEEEEEecCCCCCCeE
Confidence 567789999987643 479999988654311 11 23444444555678899999987543222
Q ss_pred -EeeEEEeeecCCCeeeecCCccccCCCCcEEEEeEEccCCCC--eEEEEECCEEcc
Q psy12725 63 -SGELKLGGRFDPPVIKESFSDETLNPGPNYYFKCIASGNPTP--EISWYLDGKKLV 116 (119)
Q Consensus 63 -~~~~~v~~~~~~~~~~~~~~~~~~~~g~~~~l~C~~~~~p~~--~~~W~~~~~~~~ 116 (119)
.+.+.+.. ..+|.+...+.......|+.+.|.|.+.+..++ .+.|++||..+.
T Consensus 438 ~~~~~~~~~-~~~P~V~~~~~~~~~~~~~~~~L~C~v~gfyP~~i~v~W~k~g~~~~ 493 (551)
T 1ntl_A 438 KTISKTKGR-PKAPQLYTIPPPKEQMAKDKVSLTCMITDFFPEDITVEWQWNGQPAE 493 (551)
T ss_pred EEEecCCCC-CcCCceEEeCCChhhccCCceEEEEEEEEeECCCCEEEEEECCEEcc
Confidence 22223222 235665544433334578899999999886433 799999998764
No 373
>1zxq_A ICAM-2, intercellular adhesion molecule-2; immunoglobulin fold, cell adhesion, glycoprotein, transmembr; HET: NAG; 2.20A {Homo sapiens} SCOP: b.1.1.3 b.1.1.4
Probab=99.22 E-value=3.6e-10 Score=62.49 Aligned_cols=112 Identities=7% Similarity=0.105 Sum_probs=73.3
Q ss_pred CCccEEEEEEeccCCCCe-eEEeeC--CccCCC-CCCCeEEEecCCCCCCeEEEEEEEcCCCCceeEeeEEEeeecCCCe
Q psy12725 1 MLALKFFTCKYEGNPVKT-ISWMKD--GKPVPD-HNEPVFRIDSVRKEDKGMYQCVIRNEQESAQASGELKLGGRFDPPV 76 (119)
Q Consensus 1 ~g~~~~l~c~~~~~~~~~-v~w~~~--~~~~~~-~~~~~l~~~~~~~~d~g~y~C~~~~~~~~~~~~~~~~v~~~~~~~~ 76 (119)
+|+++.|.|...- +.+. +.|... ...+.. .....+.+.+++ ++|.|.|.+............+++.. .|..
T Consensus 16 ~G~S~~l~Cs~~c-~~p~~~glet~l~~~~~~~g~~w~~l~l~~vs--~~g~~~C~~~c~~~~~~~~~~itVy~--~P~~ 90 (192)
T 1zxq_A 16 PKGSLEVNCSTTC-NQPEVGGLETSLNKILLDEQAQWKHYLVSNIS--HDTVLQCHFTCSGKQESMNSNVSVYQ--PPRQ 90 (192)
T ss_dssp TTEEEEEEEEESC-SSCSEEEEECSSEEEEEEEETTEEEEEEEEEC--SCEEEEEEEEETTEEEEEEEEEEECB--CCCC
T ss_pred CCCcEEEEEECCC-CCccccccccccCceEEcCCCCeEEEEEeccc--cCCeeEEEEECCCcceEEEEEEEEEe--CCCC
Confidence 5899999999964 4443 555421 111111 133568888888 78899999987644455556666532 2333
Q ss_pred eeecCCccccCCCCcEEEEeEEccC-CCC--eEEEEECCEEccc
Q psy12725 77 IKESFSDETLNPGPNYYFKCIASGN-PTP--EISWYLDGKKLVN 117 (119)
Q Consensus 77 ~~~~~~~~~~~~g~~~~l~C~~~~~-p~~--~~~W~~~~~~~~~ 117 (119)
+.+.+....+..|+.++|.|.+.+. |.. .+.|++++..+..
T Consensus 91 v~i~~~p~~~~~G~~~tL~C~v~~v~P~~~L~v~llrG~~~l~~ 134 (192)
T 1zxq_A 91 VILTLQPTLVAVGKSFTIECRVPTVEPLDSLTLFLFRGNETLHY 134 (192)
T ss_dssp CEEEEESSEECTTSEEEEEEEECSCBCGGGEEEEEEETTEEEEE
T ss_pred ceEccCCccccCCCcEEEEEEeCCeECCCCcEEEEEcCCEEeee
Confidence 3333333468899999999999765 544 4899999888753
No 374
>1hng_A CD2; T lymphocyte adhesion glycoprotein; 2.80A {Rattus rattus} SCOP: b.1.1.1 b.1.1.3
Probab=99.22 E-value=4.9e-12 Score=69.27 Aligned_cols=59 Identities=7% Similarity=0.091 Sum_probs=46.8
Q ss_pred ccEEEEEEeccCCCCeeEEeeCCccCCCCCCCeEEEecCCCCCCeEEEEEEEcCCCCceeE
Q psy12725 3 ALKFFTCKYEGNPVKTISWMKDGKPVPDHNEPVFRIDSVRKEDKGMYQCVIRNEQESAQAS 63 (119)
Q Consensus 3 ~~~~l~c~~~~~~~~~v~w~~~~~~~~~~~~~~l~~~~~~~~d~g~y~C~~~~~~~~~~~~ 63 (119)
..+.|.|.+.+.|.+.|.|++++..+..... +.+..++..|.|.|.|.+.|..+.....
T Consensus 111 ~~v~L~C~~~g~p~p~i~W~~~g~~l~~~~~--~~i~~~~~~d~G~Y~C~a~N~~g~~~~~ 169 (176)
T 1hng_A 111 SNATLTCEVLEGTDVELKLYQGKEHLRSLRQ--KTMSYQWTNLRAPFKCKAVNRVSQESEM 169 (176)
T ss_dssp TTTEEEEECSSCSSCEEEEEETTEEEEEESS--SEEEEECSCCSSCEEEEEEETTEEEEEE
T ss_pred CcEEEEEEecCCCCcEEEEEECCEECCCCCc--EEEEEEEccCCeEEEEEEEecCCCceec
Confidence 3578999999999999999999988754333 4455778999999999999987654433
No 375
>1ugn_A LIR1, leukocyte immunoglobulin-like receptor 1; immunoglobulin-like folds, immune system; 1.80A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 PDB: 3d2u_D* 1g0x_A 1p7q_D 1ufu_A 1vdg_A 2gw5_A 2dyp_D 2otp_A 3q2c_A
Probab=99.22 E-value=1.1e-10 Score=64.73 Aligned_cols=57 Identities=12% Similarity=0.243 Sum_probs=44.1
Q ss_pred CCccEEEEEEeccCCCCeeEEeeCCccCCCC-----------CCCeEEEecCCCCCCeEEEEEEEcCCC
Q psy12725 1 MLALKFFTCKYEGNPVKTISWMKDGKPVPDH-----------NEPVFRIDSVRKEDKGMYQCVIRNEQE 58 (119)
Q Consensus 1 ~g~~~~l~c~~~~~~~~~v~w~~~~~~~~~~-----------~~~~l~~~~~~~~d~g~y~C~~~~~~~ 58 (119)
.|+.++|.|.+.+. .+.+.|+|++..+... ....|.|.+++.+|.|.|.|.+.|...
T Consensus 114 ~G~~v~L~C~~~~~-~~~v~W~k~g~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~a~n~~~ 181 (198)
T 1ugn_A 114 SGGNVTLQCDSQVA-FDGFILCKEGEDEHPQCLNSQPHARGSSRAIFSVGPVSPSRRWWYRCYAYDSNS 181 (198)
T ss_dssp TTCCEEEEEECSSC-CSEEEEEEC------CEEEC------CCEEEEEECCCCTTSCEEEEEEEECTTS
T ss_pred CCCcEEEEEecCCC-CcEEEEEECCCccCCccccccccCCCcceeEEEecccCcccCeEEEEEEEeCCC
Confidence 48899999999887 6899999998765311 136899999999999999999999754
No 376
>2e6q_A Obscurin-like protein 1; IG-like domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.21 E-value=3.5e-10 Score=57.58 Aligned_cols=64 Identities=14% Similarity=0.222 Sum_probs=48.1
Q ss_pred CCccEEEEEEeccCCCCeeEEeeCCccCCCCC----------C---------CeEEEecCCCCCCeEEEEEEEcCCCCce
Q psy12725 1 MLALKFFTCKYEGNPVKTISWMKDGKPVPDHN----------E---------PVFRIDSVRKEDKGMYQCVIRNEQESAQ 61 (119)
Q Consensus 1 ~g~~~~l~c~~~~~~~~~v~w~~~~~~~~~~~----------~---------~~l~~~~~~~~d~g~y~C~~~~~~~~~~ 61 (119)
.|+.+.|.|.+.+ .+.+.|+||++.+.... + ..|.|.+++.+|+|.|+|...+. ..
T Consensus 22 eG~~a~f~C~vs~--~p~v~W~knG~~l~~~~~~~~~~~~~~r~~i~~~g~~~~L~I~~v~~~D~G~Y~~~~~~~---~~ 96 (112)
T 2e6q_A 22 DGEDAVFSLDLST--IIQGTWFLNGEELKSNEPEGQVEPGALRYRIEQKGLQHRLILHAVKHQDSGALVGFSCPG---VQ 96 (112)
T ss_dssp TTCEEEEEEEESS--CCCCEEEESSCBCCSSCCCTTSCTTSCEEEECCBTTEEEEEEESCCSTTCSEEEEEEETT---EE
T ss_pred CCCcEEEEEEECC--CCeEEEEECCEECccCcccccccccccEEEEEeCCcEEEEEECCCCHHHCccEEEEEECC---ee
Confidence 3899999999986 67899999998885543 1 26999999999999998755432 23
Q ss_pred eEeeEEEe
Q psy12725 62 ASGELKLG 69 (119)
Q Consensus 62 ~~~~~~v~ 69 (119)
.+..+.|.
T Consensus 97 ssA~L~V~ 104 (112)
T 2e6q_A 97 DSAALTIQ 104 (112)
T ss_dssp EEEEEEEE
T ss_pred EEEEEEEe
Confidence 44555553
No 377
>1p6f_A NKP46, natural cytotoxicity triggering receptor 1; natural cytotoxicity receptor, NK cell receptor, immunoglobulin fold, immune system; 2.20A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4
Probab=99.21 E-value=6.7e-11 Score=67.88 Aligned_cols=56 Identities=16% Similarity=0.356 Sum_probs=46.3
Q ss_pred CCccEEEEEEeccCCCCeeEEeeCCccCC-----CCCCCeEEEecCCCCCCeEEEEEEEcCC
Q psy12725 1 MLALKFFTCKYEGNPVKTISWMKDGKPVP-----DHNEPVFRIDSVRKEDKGMYQCVIRNEQ 57 (119)
Q Consensus 1 ~g~~~~l~c~~~~~~~~~v~w~~~~~~~~-----~~~~~~l~~~~~~~~d~g~y~C~~~~~~ 57 (119)
.|+.|+|.|.+.+. .+.+.|+|++..+. ......|.|.+++..|.|.|.|.+.+..
T Consensus 115 ~G~~vtL~C~~~~~-~~~~~w~k~g~~~~~~~~~~~~~~~l~I~~v~~~d~G~Y~C~a~n~~ 175 (242)
T 1p6f_A 115 SGEKVTFYCRLDTA-TSMFLLLKEGRSSHVQRGYGKVQAEFPLGPVTTAHRGTYRCFGSYNN 175 (242)
T ss_dssp TTCEEEEEEECTTS-CSEEEEEECSSSCEEEEEECSSEEEEEEEECCGGGCEEEEEEEEEET
T ss_pred CCCcEEEEEecCCC-CCEEEEEECCCccCccccCCCceEEEEeCCCccccCEEEEEEEECCC
Confidence 38999999998764 46899999987664 2345789999999999999999998763
No 378
>3udw_C Poliovirus receptor; PVR tigit IGSF signal transduction immunology, IGSF, cell SU receptor signalling, glycosylation, membrane protein; HET: NAG; 2.90A {Homo sapiens}
Probab=99.20 E-value=8.1e-11 Score=60.07 Aligned_cols=68 Identities=21% Similarity=0.369 Sum_probs=46.3
Q ss_pred CCccEEEEEEec-cCCCC----eeEEeeCCccCC---------------------CC------CCCeEEEecCCCCCCeE
Q psy12725 1 MLALKFFTCKYE-GNPVK----TISWMKDGKPVP---------------------DH------NEPVFRIDSVRKEDKGM 48 (119)
Q Consensus 1 ~g~~~~l~c~~~-~~~~~----~v~w~~~~~~~~---------------------~~------~~~~l~~~~~~~~d~g~ 48 (119)
.|+.++|.|.+. +.+.+ .+.|++++.... .. ...+|.|.+++.+|+|.
T Consensus 14 ~G~~v~L~C~~~~~~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~sL~I~~v~~~D~G~ 93 (118)
T 3udw_C 14 LGDSVTLPCYLQVPNMEVTHVSQLTWARHGESGSMAVFHQTQGPSYSESKRLEFVAARLGAELRNASLRMFGLRVEDEGN 93 (118)
T ss_dssp TTSCEEECCEEECCTTCCCEEEEEEEEETTCSBCSEEEETTTEEEETTCSSEEETTCCTTSCCCBCCEEECSCCGGGCEE
T ss_pred eCCcEEEEEEeECCCCCCCceEEEEEEEcCCCceEEEEeCCCCCccCCcCcEEEecccccCCCCCcEEEEeecChHHCeE
Confidence 489999999994 43433 499999742210 00 05689999999999999
Q ss_pred EEEEEEc-CCCCceeEeeEEE
Q psy12725 49 YQCVIRN-EQESAQASGELKL 68 (119)
Q Consensus 49 y~C~~~~-~~~~~~~~~~~~v 68 (119)
|.|.+.+ ..+.......+.|
T Consensus 94 Y~C~v~~~~~~~~~~~~~L~V 114 (118)
T 3udw_C 94 YTCLFVTFPQGSRSVDIWLRV 114 (118)
T ss_dssp EEEEEEEETTEEEEEEEEEEE
T ss_pred EEEEEEECCCCCccceEEEEE
Confidence 9999987 4433333444444
No 379
>1uct_A Immunoglobulin alpha FC receptor; beta stands, immune system; 2.10A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 PDB: 1ovz_A* 1ow0_C*
Probab=99.20 E-value=5.6e-11 Score=67.15 Aligned_cols=57 Identities=19% Similarity=0.262 Sum_probs=47.4
Q ss_pred CCccEEEEEEeccCCCCeeEEeeCCccCCC-----CCCCeEEEecCCCCCCeEEEEEEEcCC
Q psy12725 1 MLALKFFTCKYEGNPVKTISWMKDGKPVPD-----HNEPVFRIDSVRKEDKGMYQCVIRNEQ 57 (119)
Q Consensus 1 ~g~~~~l~c~~~~~~~~~v~w~~~~~~~~~-----~~~~~l~~~~~~~~d~g~y~C~~~~~~ 57 (119)
.|+.++|.|...+.+.+.+.|+|++..+.. .....|.|.+++.+|.|.|.|.+.+..
T Consensus 119 ~G~~v~L~C~~~~~~~~~~~W~k~g~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~n~~ 180 (218)
T 1uct_A 119 PGENISLTCSSAHIPFDRFSLAKEGELSLPQHQSGEHPANFSLGPVDLNVSGIYRCYGWYNR 180 (218)
T ss_dssp TTCCCEEEEECSSSCCSEEEEEETTCSSCCSEEECSSSEEEECCSCCGGGCEEEEEEEECTT
T ss_pred CCCCEEEEEeCCCCCCCEEEEEECCCcccccccCCCccCEEEEccCCcccCEEEEEEEEcCC
Confidence 388999999766667789999999987643 245689999999999999999999763
No 380
>3q0h_A T cell immunoreceptor with IG and ITIM domains; immune receptor, adhesion, structural genomics, NEW YORK STR genomics research consortium, nysgrc; 1.70A {Homo sapiens} PDB: 3rq3_A 3udw_A* 3ucr_A
Probab=99.19 E-value=1e-10 Score=60.02 Aligned_cols=69 Identities=13% Similarity=0.253 Sum_probs=48.9
Q ss_pred CCccEEEEEEeccC--CCCeeEEeeCCccCC-------------------CCCCCeEEEecCCCCCCeEEEEEEEc-CCC
Q psy12725 1 MLALKFFTCKYEGN--PVKTISWMKDGKPVP-------------------DHNEPVFRIDSVRKEDKGMYQCVIRN-EQE 58 (119)
Q Consensus 1 ~g~~~~l~c~~~~~--~~~~v~w~~~~~~~~-------------------~~~~~~l~~~~~~~~d~g~y~C~~~~-~~~ 58 (119)
+|+.|+|.|...+. +...+.|+|++..+. ...+.+|.|.+++.+|+|.|+|.+.. ..+
T Consensus 17 ~G~~v~L~C~~~~~~~~~~~v~W~k~~~~i~~~~~~~~~~~~~~~~~R~~~~~~~sL~I~~v~~~D~G~Y~C~v~~~~~g 96 (117)
T 3q0h_A 17 KGGSIILQCHLSSTTAQVTQVNWEQQDQLLAICNADLGWHISPSFKDRVAPGPGLGLTLQSLTVNDTGEYFCIYHTYPDG 96 (117)
T ss_dssp TTCCEEECEEEESCCCEEEEEEEEETTEEEEEEETTTEEECCGGGTTTEEECSTTCEEECSCCGGGCEEEEEEEEEETTC
T ss_pred cCCCEEEEEEecCCCCCEEEEEEEeCCEEEEEEECCCCceeCccccCcEEeCCceEEEEeeCChhhCEEEEEEEEECCCC
Confidence 48999999999762 334789998753210 01246799999999999999999754 445
Q ss_pred CceeEeeEEEe
Q psy12725 59 SAQASGELKLG 69 (119)
Q Consensus 59 ~~~~~~~~~v~ 69 (119)
.....+.+.|.
T Consensus 97 ~~~~~~~L~V~ 107 (117)
T 3q0h_A 97 TYTGRIFLEVL 107 (117)
T ss_dssp CEEEEEEEEEE
T ss_pred CeEEEEEEEEE
Confidence 55555566654
No 381
>3gsn_A RA14 TCR alpha chain (TRAV24, TRAJ49); HLA, human cytomegalovirus, PP65, T cell receptor (TCR), immune response, public response; 2.80A {Homo sapiens}
Probab=99.19 E-value=2.9e-11 Score=67.45 Aligned_cols=112 Identities=13% Similarity=0.200 Sum_probs=69.4
Q ss_pred CCccEEEEEEeccCCCCeeEEeeC--CccCC-----------------------CCCCCeEEEecCCCCCCeEEEEEEEc
Q psy12725 1 MLALKFFTCKYEGNPVKTISWMKD--GKPVP-----------------------DHNEPVFRIDSVRKEDKGMYQCVIRN 55 (119)
Q Consensus 1 ~g~~~~l~c~~~~~~~~~v~w~~~--~~~~~-----------------------~~~~~~l~~~~~~~~d~g~y~C~~~~ 55 (119)
.|+.|+|.|.+.+.....+.|||. +..+. ......|.|.+++.+|+|.|.|.+..
T Consensus 14 ~G~svtL~C~~s~~~~~~v~Wyrq~~g~~~~~l~~~~~~~~~~~~~Rfs~~~~~~~~~~sL~I~~l~~~DsG~Y~Ca~~~ 93 (199)
T 3gsn_A 14 EGDSTNFTCSFPSSNFYALHWYRWETAKSPEALFVMTLNGDEKKKGRISATLNTKEGYSYLYIKGSQPEDSATYLCARNT 93 (199)
T ss_dssp TTCCCEEEEECCCTTCCCEEEEEECTTSCCEEEEEECSTTCCCEETTEECCCBTTTTEEEEEBSSCCGGGCEEEEEEEES
T ss_pred CCCCEEEEEEEcCCCCCEEEEEEECCCCCcEEEEEECCCCCccccCceEEEECCCCCEEEEEEccCcccCCccEEEEEcc
Confidence 489999999997655567999983 22110 00124689999999999999999865
Q ss_pred CCC-CceeEeeEEEeee--cCCCeeeecCCccccCCCCcEEEEeEEccCCCC-eEEEEECCEEccc
Q psy12725 56 EQE-SAQASGELKLGGR--FDPPVIKESFSDETLNPGPNYYFKCIASGNPTP-EISWYLDGKKLVN 117 (119)
Q Consensus 56 ~~~-~~~~~~~~~v~~~--~~~~~~~~~~~~~~~~~g~~~~l~C~~~~~p~~-~~~W~~~~~~~~~ 117 (119)
... .......+.|... ..+|.+-..... . ..+.|.|.+.+..+. .+.|.++|..+..
T Consensus 94 ~~~~~fG~GT~L~V~~~~~~~~P~V~~~~~~---~--~~~tl~Cl~~gf~P~i~~~~~~~~~~~~~ 154 (199)
T 3gsn_A 94 GNQFYFGTGTSLTVIPNIQNPDPAVYQLRDS---K--SSDKSVCLFTDFDSQTNVSQSKDSDAYIT 154 (199)
T ss_dssp SSCEEECSCEEEEEECCCSSCCCEEEECCCS---S--SSSSCCEEEETCCTTCCSSCSSCSSEEEC
T ss_pred cccccCCCCEEEEEecccCCCCCEEEEcccC---C--CCceEEEEeecccCCeEeEeccCCCeEec
Confidence 311 1122334555432 122333222111 1 236788999887444 6899988877654
No 382
>3uto_A Twitchin; kinase, muscle sarcomere, transferase; HET: FLC P33; 2.40A {Caenorhabditis elegans} PDB: 1koa_A
Probab=99.19 E-value=9.6e-11 Score=74.62 Aligned_cols=67 Identities=21% Similarity=0.360 Sum_probs=56.9
Q ss_pred CccEEEEEEeccCCCCeeEEeeCCccCCCC---------CCCeEEEecCCCCCCeEEEEEEEcCCCCceeEeeEEE
Q psy12725 2 LALKFFTCKYEGNPVKTISWMKDGKPVPDH---------NEPVFRIDSVRKEDKGMYQCVIRNEQESAQASGELKL 68 (119)
Q Consensus 2 g~~~~l~c~~~~~~~~~v~w~~~~~~~~~~---------~~~~l~~~~~~~~d~g~y~C~~~~~~~~~~~~~~~~v 68 (119)
|+.+.|.|.+.|.|.|.++|+++++.+... ....|.|..+...|.|.|+|.+.|..|.....+.+.|
T Consensus 497 G~~~~~~~~v~g~P~P~v~W~k~~~el~~s~~~~i~~~~~~~~L~I~~~~~~D~G~Yt~~A~N~~G~~~~~v~l~V 572 (573)
T 3uto_A 497 GQSANFYCRVIASSPPVVTWHKDDRELKQSVKYMKRYNGNDYGLTINRVKGDDKGEYTVRAKNSYGTKEEIVFLNV 572 (573)
T ss_dssp TSCEEEEEEEECSSCCEEEEEETTEECCSSSSEEEEEETTEEEEEECSCCGGGCEEEEEEEEETTEEEEEEEEEEE
T ss_pred CCcEEEEEEEEccCCCeEEEEECCEEcccCCcEEEEEcCCEEEEEEcCCCcccCcEEEEEEEeCCCcEEEEEEEEE
Confidence 889999999999999999999999877542 2357899999999999999999999877766666554
No 383
>2d3v_A Leukocyte immunoglobulin-like receptor subfamily A member 5 isoform 1; immunoglobulin-like fold, immune system; 1.85A {Homo sapiens}
Probab=99.17 E-value=6.6e-11 Score=65.62 Aligned_cols=56 Identities=11% Similarity=0.118 Sum_probs=41.4
Q ss_pred CCccEEEEEEeccCCCCeeEEeeCCccCCC--------C---CCCeEEEecCCCCCCeEEEEEEEcCC
Q psy12725 1 MLALKFFTCKYEGNPVKTISWMKDGKPVPD--------H---NEPVFRIDSVRKEDKGMYQCVIRNEQ 57 (119)
Q Consensus 1 ~g~~~~l~c~~~~~~~~~v~w~~~~~~~~~--------~---~~~~l~~~~~~~~d~g~y~C~~~~~~ 57 (119)
.|+.++|.|.+.+.| +.+.|+|++..+.. . ....|.|.+++.+|.|.|.|.+.+..
T Consensus 113 ~G~~v~L~C~~~~~p-~~~~W~k~g~~~~~~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~n~~ 179 (196)
T 2d3v_A 113 SGENVTLQCGSRLRF-DRFILTEEGDHKLSWTLDSQLTPSGQFQALFPVGPVTPSHRWMLRCYGSRRH 179 (196)
T ss_dssp ----CEEEEEESSCC-SEEEEEEC---CCEEEEECEECTTSCEEEEEECCCCBTTBCEEEEEEEEETT
T ss_pred CCCcEEEEEEcCCCC-CEEEEEccCCcccccccccccccCCCceeEEEeeecCcccCeeEEEEEEccC
Confidence 388999999999888 89999999876531 1 12688999999999999999999864
No 384
>1oll_A NK receptor; immune system/receptor, NK cell triggering receptor, immune system, IG domain, cytotoxicity, C2-type IG-like domains; 1.93A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4
Probab=99.17 E-value=8.8e-11 Score=64.78 Aligned_cols=56 Identities=16% Similarity=0.360 Sum_probs=46.2
Q ss_pred CCccEEEEEEeccCCCCeeEEeeCCccCC-----CCCCCeEEEecCCCCCCeEEEEEEEcCC
Q psy12725 1 MLALKFFTCKYEGNPVKTISWMKDGKPVP-----DHNEPVFRIDSVRKEDKGMYQCVIRNEQ 57 (119)
Q Consensus 1 ~g~~~~l~c~~~~~~~~~v~w~~~~~~~~-----~~~~~~l~~~~~~~~d~g~y~C~~~~~~ 57 (119)
.|+.++|.|.+.+ +.+.+.|+|++..+. ......|.|.+++.+|.|.|.|.+.+..
T Consensus 112 ~G~~v~L~C~~~~-~~~~~~w~k~g~~~~~~~~~~~~~~~L~I~~v~~~d~G~Y~C~a~n~~ 172 (188)
T 1oll_A 112 SGEKVTFYCRLDT-ATSMFLLLKEGRSSHVQRGYGKVQAEFPLGPVTTAHRGTYRCFGSYNN 172 (188)
T ss_dssp TTCEEEEEEECSS-SCSEEEEEEESSSCEEEEEECSSEEEEEEEECCGGGCEEEEEECEEET
T ss_pred cCCEEEEEEEcCC-CCCEEEEEECCccccccccCCCceeEEEECCCCcCCCcEEEEEEEcCC
Confidence 3899999999876 456899999987654 2345689999999999999999998764
No 385
>1jhl_L IGG1-kappa D11.15 FV (light chain); complex(antibody-antigen); 2.40A {Mus musculus} SCOP: b.1.1.1
Probab=99.16 E-value=1.4e-10 Score=58.65 Aligned_cols=57 Identities=21% Similarity=0.315 Sum_probs=44.2
Q ss_pred CCccEEEEEEeccCCCCeeEEeeCCc--cC------------CCC---------CCCeEEEecCCCCCCeEEEEEEEcCC
Q psy12725 1 MLALKFFTCKYEGNPVKTISWMKDGK--PV------------PDH---------NEPVFRIDSVRKEDKGMYQCVIRNEQ 57 (119)
Q Consensus 1 ~g~~~~l~c~~~~~~~~~v~w~~~~~--~~------------~~~---------~~~~l~~~~~~~~d~g~y~C~~~~~~ 57 (119)
.|+.|+|.|.+.+.+.+.+.|||... .. ... ....|.|.+++.+|+|.|.|.+.+..
T Consensus 15 ~G~~v~L~C~~~~~~~~~v~W~r~~~~~~~~~l~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~DsG~Y~C~~~n~~ 94 (108)
T 1jhl_L 15 PGETITINCRASKSISKSLAWYQEKPGKTNNLLIYSGSTLQSGIPSRFSGSGSGTDFTLTISSLEPEDFAMYICQQHNEY 94 (108)
T ss_dssp TTSCEEEEEEESSCCTTCEEEEEECTTSCCEEEEETTTEECTTCCTTEEEEESSSEEEEEECSCCTTCCSEEEEEECSSS
T ss_pred CCCCEEEEeEECCCCCceEEEEEECCCCCCEEEEEcCCCcCCCCCceEEEEecCCEEEEEECCCCHHHCEEEEEEEccCC
Confidence 48999999999988888999998531 10 000 12469999999999999999998863
No 386
>3tjh_C 42F3 alpha; IG MHC, antigen recognition, TCR-PMHC, membrane receptor, IM system; 2.12A {Mus musculus} PDB: 3tpu_A 3tfk_C 1j8h_D* 1fyt_D* 4gkz_A* 3rev_A 1mwa_A* 1g6r_A* 1tcr_A* 2ckb_A 1zgl_M 3c5z_A 1i9e_A* 2oi9_B 2e7l_A 2icw_I 3e2h_B 3e3q_D 4h1l_G
Probab=99.16 E-value=9.1e-11 Score=66.56 Aligned_cols=112 Identities=14% Similarity=0.196 Sum_probs=68.1
Q ss_pred CCccEEEEEEeccCCCCeeEEeeC--CccC--------------C----------CCCCCeEEEecCCCCCCeEEEEEEE
Q psy12725 1 MLALKFFTCKYEGNPVKTISWMKD--GKPV--------------P----------DHNEPVFRIDSVRKEDKGMYQCVIR 54 (119)
Q Consensus 1 ~g~~~~l~c~~~~~~~~~v~w~~~--~~~~--------------~----------~~~~~~l~~~~~~~~d~g~y~C~~~ 54 (119)
.|+.|+|.|.+.+.....+.|||. ++.+ . ......|.|.+++.+|+|.|.|.+.
T Consensus 23 ~G~sVtL~C~~s~~~~~~v~WyrQ~pg~~~~~Li~~~~~~~~~~~~~Rfs~s~~~~~~~~sLtI~~lq~~DSG~YyCa~~ 102 (226)
T 3tjh_C 23 EGASLQLRCKYSYSATPYLFWYVQYPRQGLQMLLKYYSGDPVVQGVNGFEAEFSKSDSSFHLRKASVHWSDSAVYFCAVS 102 (226)
T ss_dssp TTSCEEECCEEEESSCEEEEEEEECTTSCCEEEEEECSSSSEEECGGGEEEEEETTTTEEEEEESSCCGGGCEEEEEEEE
T ss_pred cCCCEEEEEEEecCCCCeEEEEEECCCCCcEEEEEecCCCccccccCcEEEEEcCCCCEEEEEEecCCcccCCCEEEEEE
Confidence 489999999997655567999983 2211 0 0112468999999999999999987
Q ss_pred cCC--CC--ceeEeeEEEeee--cCCCeeeecCCccccCCCCcEEEEeEEccCCCC-eEEEEECCEEccc
Q psy12725 55 NEQ--ES--AQASGELKLGGR--FDPPVIKESFSDETLNPGPNYYFKCIASGNPTP-EISWYLDGKKLVN 117 (119)
Q Consensus 55 ~~~--~~--~~~~~~~~v~~~--~~~~~~~~~~~~~~~~~g~~~~l~C~~~~~p~~-~~~W~~~~~~~~~ 117 (119)
... .. ......+.|... ...|.+-..... . ..+++.|.+.+..++ .+.|.++|..+..
T Consensus 103 ~~~~~~~~~fG~GT~LtV~~~~~~~~P~V~~~~~~----~-~~~tl~Cl~~~f~P~i~v~~~~~~~~~~~ 167 (226)
T 3tjh_C 103 AKGTGSKLSFGKGAKLTVSPNIQNPDPAVYQLRDS----K-SSDKSVCLFTDFDSQTNVSQSKDSDVYIT 167 (226)
T ss_dssp ESSCSSSEEECCCEEEEEECCCSSCCCEEEEEEEC----C----CEEEEEESCCTTCCCCCCSCTTEEEC
T ss_pred ecCCccccccCCCeEEEEeCCCCCCCCEEEEcccC----C-CCeEEEEEcccccCCcEEEeeccCceeec
Confidence 531 11 112334555432 122333221111 1 346899999887445 6899998877654
No 387
>1olz_A Semaphorin 4D; developmental protein, CD100, beta-propeller, PSI domain, IG-like domain, extracellular receptor, neurogenesis; 2.0A {Homo sapiens} SCOP: b.1.1.4 b.69.12.1 g.16.2.1 PDB: 3ol2_A*
Probab=99.15 E-value=2.1e-10 Score=73.99 Aligned_cols=97 Identities=13% Similarity=0.175 Sum_probs=52.1
Q ss_pred CccEEEEEEeccCCCCeeEEeeCCccCCC-------CCCCeEEEecCCCCCCeEEEEEEEcCCCC---ceeEeeEEEeee
Q psy12725 2 LALKFFTCKYEGNPVKTISWMKDGKPVPD-------HNEPVFRIDSVRKEDKGMYQCVIRNEQES---AQASGELKLGGR 71 (119)
Q Consensus 2 g~~~~l~c~~~~~~~~~v~w~~~~~~~~~-------~~~~~l~~~~~~~~d~g~y~C~~~~~~~~---~~~~~~~~v~~~ 71 (119)
|+.+.|.|...+ +.+.+.|++++..+.. ..+..|.|..++..|.|.|.|.+.+.... ......+.+.+.
T Consensus 548 g~~~~L~C~~~s-p~a~v~W~~~~~~l~~~~~~~~~~~~~~LlI~~v~~~DsG~Y~C~A~e~~~~~~~~~~~~~~~l~V~ 626 (663)
T 1olz_A 548 GGTAELKCSQKS-NLARVFWKFQNGVLKAESPKYGLMGRKNLLIFNLSEGDSGVYQCLSEERVKNKTVFQVVAKHVLEVK 626 (663)
T ss_dssp TSCEEECCCCSC-TTCEEEEEESSSBCCCCSSSBCCTTTTCEEECSCCGGGCEEEEEEEEEECSSSEEEEEEEEEEEEEE
T ss_pred CCcEEEEccCCC-CCCcEEEEECCeeccccCcceEEecCCeEEEEecCcccCeEEEEEEEECccCCCceEEEEEEEEEEE
Confidence 788999999998 9999999999876532 12467999999999999999999987322 222334444443
Q ss_pred cCCCeeeecCC-ccccCCCCcEEEEeEEcc
Q psy12725 72 FDPPVIKESFS-DETLNPGPNYYFKCIASG 100 (119)
Q Consensus 72 ~~~~~~~~~~~-~~~~~~g~~~~l~C~~~~ 100 (119)
.+|.+...+. .....+|+.+.+.|.+..
T Consensus 627 -v~P~~~~~p~~~~~~~~g~~~~~~~~~~~ 655 (663)
T 1olz_A 627 -VVPKPVVAPTLSVVQTEGSRIATKVLVAS 655 (663)
T ss_dssp -C----------------------------
T ss_pred -eCCccCCCCCChhhhhcCCceEEEeeccc
Confidence 3666666544 345679999999998743
No 388
>4gjt_B Poliovirus receptor-related protein 4; six-bladed -propeller, IGV-like fold, viral entry, MV-H, NEC BETA4/BETA5 groove; HET: NAG; 3.10A {Homo sapiens}
Probab=99.15 E-value=5.4e-10 Score=57.75 Aligned_cols=68 Identities=18% Similarity=0.324 Sum_probs=45.9
Q ss_pred CCccEEEEEEeccCCC---CeeEEeeCCccCC------------------------------CCCCCeEEEecCCCCCCe
Q psy12725 1 MLALKFFTCKYEGNPV---KTISWMKDGKPVP------------------------------DHNEPVFRIDSVRKEDKG 47 (119)
Q Consensus 1 ~g~~~~l~c~~~~~~~---~~v~w~~~~~~~~------------------------------~~~~~~l~~~~~~~~d~g 47 (119)
+|+.|+|.|.+.+.+. ..|.|+|...... .....+|.|.+++.+|+|
T Consensus 14 ~G~~v~L~C~~~~~~~~~~~~V~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~~sL~I~~v~~~DsG 93 (123)
T 4gjt_B 14 LGQDAKLPCFYRGDSGEQVGQVAWARVDAGEGAQELALLHSKYGLHVSPAYEGRVEQPPPPRNPLDGSVLLRNAVQADEG 93 (123)
T ss_dssp TTSEEEECCEECCCTTCCEEEEEEEECCCSSCCCEEEEECSSSCCCBCGGGTTTEECCCSSCCTTBCCEEEESCCSSSCS
T ss_pred cCCCEEEEEEEeCCccCceeEEEEEEcCCCCCcceeEEEEecCCcEeCccceeEEEEecCCCcCCEEEEEECCCChHHCE
Confidence 4999999999976543 3578998431100 001357999999999999
Q ss_pred EEEEEEEc-CCCCceeEeeEEE
Q psy12725 48 MYQCVIRN-EQESAQASGELKL 68 (119)
Q Consensus 48 ~y~C~~~~-~~~~~~~~~~~~v 68 (119)
.|.|.+.+ ..+.....+.+.|
T Consensus 94 ~Y~C~v~t~~~g~~~~~~~L~V 115 (123)
T 4gjt_B 94 EYECRVSTFPAGSFQARLRLRV 115 (123)
T ss_dssp EEEEEEEESSSCEEEEEEEEEC
T ss_pred EEEEEEEECCCCeEEeEEEEEE
Confidence 99998865 3444444444544
No 389
>1eaj_A Coxsackie virus and adenovirus receptor; virus/viral protein receptor, immunoglobulin V domain fold, symmetric dimer; 1.35A {Homo sapiens} SCOP: b.1.1.1 PDB: 1f5w_A 2j12_B 2j1k_A 2wbw_B* 2w9l_A* 1rsf_A 1jew_R 1kac_B 1p69_B 1p6a_B
Probab=99.14 E-value=9.9e-11 Score=60.28 Aligned_cols=68 Identities=19% Similarity=0.436 Sum_probs=47.4
Q ss_pred CCccEEEEEEeccCCC----CeeEEeeCCcc-------C-------------C-C------CC------CCeEEEecCCC
Q psy12725 1 MLALKFFTCKYEGNPV----KTISWMKDGKP-------V-------------P-D------HN------EPVFRIDSVRK 43 (119)
Q Consensus 1 ~g~~~~l~c~~~~~~~----~~v~w~~~~~~-------~-------------~-~------~~------~~~l~~~~~~~ 43 (119)
.|+.++|.|.+.+.+. ..+.|++++.. + . . .. ..+|.|.+++.
T Consensus 19 ~G~~v~L~C~~~~~~~~~~~~~v~W~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~sL~I~~v~~ 98 (126)
T 1eaj_A 19 KGETAYLPCKFTLSPEDQGPLDIEWLISPADNQKVDQVIILYSGDKIYDDYYPDLKGRVHFTSNDLKSGDASINVTNLQL 98 (126)
T ss_dssp TTSCEEECCBEECCTTCCSCEEEEEEEEETTSSCCSEEEEEEETTEEECTTSSTTTTTEEECCSCGGGTBCCEEECSCCG
T ss_pred eCCCEEEEEEEecCCCCCCceEEEEEEeCCCcCCCceEEEEEeCCeeccccCccccCeeEEEcccccCCeEEEEECcCCh
Confidence 4899999999976543 35999985421 1 0 0 01 26799999999
Q ss_pred CCCeEEEEEEEcCCCCceeEeeEEE
Q psy12725 44 EDKGMYQCVIRNEQESAQASGELKL 68 (119)
Q Consensus 44 ~d~g~y~C~~~~~~~~~~~~~~~~v 68 (119)
+|+|.|.|.+.+..+.....+.+.|
T Consensus 99 ~D~G~Y~C~v~~~~~~~~~~~~L~V 123 (126)
T 1eaj_A 99 SDIGTYQCKVKKAPGVANKKIHLVV 123 (126)
T ss_dssp GGCEEEEEEEEETTEEEEEEEEEEE
T ss_pred HHCeEEEEEEEcCCccCCcEEEEEE
Confidence 9999999999987554444444444
No 390
>2d9c_A Signal-regulatory protein beta-1; beta-sandwich, SIRP-beta-1, CD172B antigen, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.14 E-value=1.2e-09 Score=57.34 Aligned_cols=57 Identities=19% Similarity=0.365 Sum_probs=43.4
Q ss_pred CCccEEEEEEeccC-CCCeeEEeeCCcc----CC-----------C--------CCCCeEEEecCCCCCCeEEEEEEEcC
Q psy12725 1 MLALKFFTCKYEGN-PVKTISWMKDGKP----VP-----------D--------HNEPVFRIDSVRKEDKGMYQCVIRNE 56 (119)
Q Consensus 1 ~g~~~~l~c~~~~~-~~~~v~w~~~~~~----~~-----------~--------~~~~~l~~~~~~~~d~g~y~C~~~~~ 56 (119)
.|+.|+|.|.+.+. +...+.|||.... +. . .....|.|.+++.+|+|.|.|.+.+.
T Consensus 22 ~G~~v~L~C~~~~~~~~~~v~W~r~~~~~~~~i~~~~~~~~~r~~~~~~~~~~~~~~~~L~I~~v~~~DsG~Y~C~~~~~ 101 (136)
T 2d9c_A 22 AGESATLRCAMTSLIPVGPIMWFRGAGAGRELIYNQKEGHFPRVTTVSELTKRNNLDFSISISNITPADAGTYYCVKFRK 101 (136)
T ss_dssp TTSCEEECCEESCCCSCCCCEEEETTTSSCEEEEESSSCCCSSBCCSSCSSSSSCCBCCEEESSCCTTTCEEEEEEEEEC
T ss_pred CCCCEEEEEEEcCCCCCceEEEEeecCCCeEEEEEcCCCcccceeeeeeeccCCCCEEEEEECCCCHHHCEEEEEEEEeC
Confidence 48999999999765 4568999996521 10 0 01457999999999999999999875
Q ss_pred C
Q psy12725 57 Q 57 (119)
Q Consensus 57 ~ 57 (119)
.
T Consensus 102 ~ 102 (136)
T 2d9c_A 102 G 102 (136)
T ss_dssp C
T ss_pred C
Confidence 3
No 391
>2oyp_A Hepatitis A virus cellular receptor 2; TIM-3, T-cell immunoglobulin mucin, signaling protein; 1.95A {Mus musculus} PDB: 3kaa_A*
Probab=99.13 E-value=1.6e-10 Score=58.28 Aligned_cols=69 Identities=25% Similarity=0.368 Sum_probs=48.6
Q ss_pred CCccEEEEEEeccCCC---CeeEEeeCCcc---------------C----CC---------CCCCeEEEecCCCCCCeEE
Q psy12725 1 MLALKFFTCKYEGNPV---KTISWMKDGKP---------------V----PD---------HNEPVFRIDSVRKEDKGMY 49 (119)
Q Consensus 1 ~g~~~~l~c~~~~~~~---~~v~w~~~~~~---------------~----~~---------~~~~~l~~~~~~~~d~g~y 49 (119)
.|+.|+|.|.+.+.+. ..+.|++.... . .. ....+|.|.+++.+|+|.|
T Consensus 8 ~G~~v~L~C~~~~~~~~~~~~v~W~~~~~~~~~~~~~~~~~~g~~~~~~~~~r~~~~~~~~~~~~sL~I~~v~~~D~G~Y 87 (109)
T 2oyp_A 8 VGKNAYLPCSYTLPTSGTLVPMCWGKGFCPWSQCTNELLRTDERNVTYQKSSRYQLKGDLNKGDVSLIIKNVTLDDHGTY 87 (109)
T ss_dssp TTSCEEECCBCCCCTTCCCCCEEEESSSCCSSSCSSEEEEECSSSEEEESCTTEEECSCGGGTBCCEEECSCCGGGCEEE
T ss_pred cCCCEEEEEEeECCCCCCeEEEEEEecCCCCCCceeEEEEcCCcCccccccceEEEccCccCCcEeEEEccCCChhCeEE
Confidence 4899999999876532 34899985421 0 00 0125799999999999999
Q ss_pred EEEEEcCCCCceeEeeEEEe
Q psy12725 50 QCVIRNEQESAQASGELKLG 69 (119)
Q Consensus 50 ~C~~~~~~~~~~~~~~~~v~ 69 (119)
.|.+.+..+.......+.|.
T Consensus 88 ~C~v~~~~~~~~~~~~l~V~ 107 (109)
T 2oyp_A 88 CCRIQFPGLMNDKKLELKLD 107 (109)
T ss_dssp EEEECCSSTTCCEEEEEEEE
T ss_pred EEEEEcCCcccceEEEEEEE
Confidence 99999876555555555553
No 392
>3zyi_A Leucine-rich repeat-containing protein 4; cell adhesion, LRRC4 complex, synapse; HET: NAG; 2.60A {Homo sapiens} PDB: 3zyo_A* 3zyn_A* 2dl9_A
Probab=99.13 E-value=1e-10 Score=72.45 Aligned_cols=68 Identities=19% Similarity=0.434 Sum_probs=52.7
Q ss_pred CCccEEEEEEeccCCCCeeEEeeCCc-cCCC---------CCCCeEEEecCCCCCCeEEEEEEEcCCCCceeEeeEEEee
Q psy12725 1 MLALKFFTCKYEGNPVKTISWMKDGK-PVPD---------HNEPVFRIDSVRKEDKGMYQCVIRNEQESAQASGELKLGG 70 (119)
Q Consensus 1 ~g~~~~l~c~~~~~~~~~v~w~~~~~-~~~~---------~~~~~l~~~~~~~~d~g~y~C~~~~~~~~~~~~~~~~v~~ 70 (119)
.|+.+.|.|.+. |.|.|.|++++. .+.. .....|.|.+++.+|.|.|+|.+.|..+.......+.|..
T Consensus 366 ~G~~~~l~C~~~--p~p~i~W~~~~~~~~~~~~~~~~~~~~~~g~L~i~~v~~~D~G~Y~C~a~N~~G~~~~~~~l~v~~ 443 (452)
T 3zyi_A 366 EGRMAELKCRTP--PMSSVKWLLPNGTVLSHASRHPRISVLNDGTLNFSHVLLSDTGVYTCMVTNVAGNSNASAYLNVST 443 (452)
T ss_dssp TTSCCEECCBCC--TTSEEEEECTTSCEECSSCCCSSCEECTTSCEECSSCCTTCCEEEEEEEECSSCEEEEEEEEEC--
T ss_pred CCCEEEEEEeCC--CCCcEEEEeCCCcEeccCCCCCCEEECCCCeEEEeecCHHHCEEEEEEEEcCCCcEEEEEEEEEEc
Confidence 489999999987 889999999543 3221 1346799999999999999999999988776666666543
No 393
>3khq_A B-cell antigen receptor complex-associated protei chain; CD79B, CD79A, IG-beta, BCR, IG domain, V-SET, immunoglobulin protein binding; HET: FLC GSH; 1.70A {Mus musculus} PDB: 3kho_A*
Probab=99.12 E-value=1.9e-10 Score=60.32 Aligned_cols=56 Identities=16% Similarity=0.427 Sum_probs=42.7
Q ss_pred CCccEEEEEEeccCCCCeeEEeeCC--ccC---C-C---------CCCCeEEEecCCCCCCeEEEEEEEcCCC
Q psy12725 1 MLALKFFTCKYEGNPVKTISWMKDG--KPV---P-D---------HNEPVFRIDSVRKEDKGMYQCVIRNEQE 58 (119)
Q Consensus 1 ~g~~~~l~c~~~~~~~~~v~w~~~~--~~~---~-~---------~~~~~l~~~~~~~~d~g~y~C~~~~~~~ 58 (119)
.|+.|+|.|.+.+. +.+.|||+. ..+ . . .....|.|.+++.+|+|.|+|.+.+..+
T Consensus 31 ~G~~v~L~C~~~~~--~~v~W~r~~~g~~~~~l~~~~~r~~~~~~~~~~~L~I~~~~~~DsG~Y~C~a~n~~g 101 (133)
T 3khq_A 31 RSSMVKFHCYTNHS--GALTWFRKRGSQQPQELVSEEGRIVQTQNGSVYTLTIQNIQYEDNGIYFCKQKCDSA 101 (133)
T ss_dssp TTCCEEEEEEESSS--SCEEEEEECTTSCCEECCCTTTTEEEEEETTEEEEEECSCCGGGCEEEEEEESSCC-
T ss_pred CCCeEEEEEEeCCC--CEEEEEEeCCCCCCEEEEEeCCCEEEEcCCCEEEEEECCCChHHCEEEEEEEEeCCC
Confidence 48999999999876 889999863 221 0 0 1123599999999999999999988753
No 394
>1pko_A Myelin oligodendrocyte glycoprotein; IGV-domain, immune system; 1.45A {Rattus norvegicus} SCOP: b.1.1.1 PDB: 1pkq_E 3csp_A 1py9_A
Probab=99.12 E-value=4.7e-10 Score=59.07 Aligned_cols=68 Identities=24% Similarity=0.418 Sum_probs=46.8
Q ss_pred CCccEEEEEEeccCC---CCeeEEeeCCcc--C-------------CC--C------------CCCeEEEecCCCCCCeE
Q psy12725 1 MLALKFFTCKYEGNP---VKTISWMKDGKP--V-------------PD--H------------NEPVFRIDSVRKEDKGM 48 (119)
Q Consensus 1 ~g~~~~l~c~~~~~~---~~~v~w~~~~~~--~-------------~~--~------------~~~~l~~~~~~~~d~g~ 48 (119)
+|+.|+|.|.+.+.+ ...+.|++++.. + .. . ...+|.|.+++.+|+|.
T Consensus 20 ~G~~v~L~C~~~~~~~~~~~~v~W~~~~~~~~v~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~~sL~I~~v~~~D~G~ 99 (139)
T 1pko_A 20 VGDEAELPCRISPGKNATGMEVGWYRSPFSRVVHLYRNGKDQDAEQAPEYRGRTELLKESIGEGKVALRIQNVRFSDEGG 99 (139)
T ss_dssp TTSCEEEEEEEESCCCCTTSEEEEEEC--CCEEEEEETTEECGGGSCSTTTTSEEEECTTGGGTEEEEEESSCCGGGCEE
T ss_pred eCCCEEEeeEccCCCCCCceEEEEEECCCCceEEEEeCCcccccccCcccCCceEEccccccCCeEEEEEccCCHHHCEE
Confidence 489999999997543 368999987531 0 00 0 12469999999999999
Q ss_pred EEEEEEcCCCCceeEeeEEE
Q psy12725 49 YQCVIRNEQESAQASGELKL 68 (119)
Q Consensus 49 y~C~~~~~~~~~~~~~~~~v 68 (119)
|.|.+.+..+.....+.+.|
T Consensus 100 Y~C~v~~~~~~~~~~~~L~V 119 (139)
T 1pko_A 100 YTCFFRDHSYQEEAAVELKV 119 (139)
T ss_dssp EEEEEEETTEEEEEEEEEEE
T ss_pred EEEEEEcCCCceEEEEEEEE
Confidence 99999987654333444444
No 395
>2qsq_A Carcinoembryonic antigen-related cell adhesion MO; glycoprotein, GPI-anchor, immunoglobulin DOMA lipoprotein, membrane; 1.95A {Homo sapiens} PDB: 2qst_A 2ver_N* 2gk2_A
Probab=99.12 E-value=6.4e-10 Score=56.57 Aligned_cols=68 Identities=13% Similarity=0.197 Sum_probs=47.1
Q ss_pred CCccEEEEEEeccCCCCeeEEeeCCccCC--------------------C-----CCCCeEEEecCCCCCCeEEEEEEEc
Q psy12725 1 MLALKFFTCKYEGNPVKTISWMKDGKPVP--------------------D-----HNEPVFRIDSVRKEDKGMYQCVIRN 55 (119)
Q Consensus 1 ~g~~~~l~c~~~~~~~~~v~w~~~~~~~~--------------------~-----~~~~~l~~~~~~~~d~g~y~C~~~~ 55 (119)
.|+.|.|.|.....+...+.|||...... . -.+.+|.|.+++.+|.|.|+|.+.+
T Consensus 14 ~G~~v~L~~~~~p~~~~~i~W~kg~~~~~~~~I~~y~~~~~~~~~~~~~~gR~~~~~ngSL~I~nvt~~D~G~Ytc~v~~ 93 (111)
T 2qsq_A 14 EGKEVLLLVHNLPQHLFGYSWYKGERVDGNRQIIGYVIGTQQATPGPAYSGREIIYPNASLLIQNIIQNDAGFYTLHVIK 93 (111)
T ss_dssp TTSCEEEEEESCCSSEEEEEEEESSSCCGGGEEEEEETTTTEEEECTTCCSCEEECTTSCEEECSCCGGGCEEEEEEEEE
T ss_pred cCCCEEEEEeCCCCCceEEEEEeCCCCCCCcEEEEEECCCcceecCcccCCcEEEecCCcEEEccCcccCCeEEEEEEEe
Confidence 48999999985332334699999653220 0 1357899999999999999999998
Q ss_pred CCCC-ceeEeeEEE
Q psy12725 56 EQES-AQASGELKL 68 (119)
Q Consensus 56 ~~~~-~~~~~~~~v 68 (119)
..+. ......+.|
T Consensus 94 ~~~~~~~~~~~L~V 107 (111)
T 2qsq_A 94 SDLVNEEATGQFRV 107 (111)
T ss_dssp TTSCCEEEEEEEEE
T ss_pred CCCcEEEEEEEEEE
Confidence 7543 333344443
No 396
>2gi7_A GPVI protein; IG-like domains, blood clotting, cell adhesion; 2.40A {Homo sapiens}
Probab=99.11 E-value=2.1e-10 Score=63.06 Aligned_cols=57 Identities=19% Similarity=0.352 Sum_probs=46.0
Q ss_pred CCccEEEEEEeccCCCCeeEEeeCCccCCCC-----CCCeEEEecCCCCCCeEEEEEEEcCCC
Q psy12725 1 MLALKFFTCKYEGNPVKTISWMKDGKPVPDH-----NEPVFRIDSVRKEDKGMYQCVIRNEQE 58 (119)
Q Consensus 1 ~g~~~~l~c~~~~~~~~~v~w~~~~~~~~~~-----~~~~l~~~~~~~~d~g~y~C~~~~~~~ 58 (119)
.|+.+.|.|.+.+. .+.+.|+|++..+... ....|.|.+++.+|.|.|.|.+.|...
T Consensus 107 ~G~~v~l~C~~~~~-~~~~~w~k~g~~~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~a~n~~~ 168 (184)
T 2gi7_A 107 SGGDVTLQCQTRYG-FDQFALYKEGDPAPYKNPERWYRASFPIITVTAAHSGTYRCYSFSSRD 168 (184)
T ss_dssp CTTCEEEEEECSSC-CCEEEEEECCCCTTSCCCCEEEEESSSEEEETTCCSEEEEEEEECTTS
T ss_pred CCCcEEEEEEcCCC-CcEEEEEECCCcCcceecCCCceEEEEEccCCccCCeEEEEEEEeCCC
Confidence 38999999998764 4689999999876532 234678889999999999999999754
No 397
>2bnu_A TCR alpha chain, T-cell receptor alpha chain C region; superagonist peptide T-cell vaccines, transmembrane, immunoglobulin domain; 1.40A {Homo sapiens} PDB: 2bnq_D 2bnr_D 2f54_D 2pyf_A* 2pye_D* 2f53_D 2p5e_D* 2p5w_D* 3mv7_D 3mv8_D 3mv9_D 3utt_D 2cdg_A
Probab=99.11 E-value=1.4e-09 Score=60.86 Aligned_cols=101 Identities=11% Similarity=0.257 Sum_probs=62.9
Q ss_pred CCccEEEEEEeccCCCCeeEEeeCC--cc---C-----------CC---------CCCCeEEEecCCCCCCeEEEEEEEc
Q psy12725 1 MLALKFFTCKYEGNPVKTISWMKDG--KP---V-----------PD---------HNEPVFRIDSVRKEDKGMYQCVIRN 55 (119)
Q Consensus 1 ~g~~~~l~c~~~~~~~~~v~w~~~~--~~---~-----------~~---------~~~~~l~~~~~~~~d~g~y~C~~~~ 55 (119)
+|+.|+|.|.+.+.....+.|||.. .. + .. .....|.|.+++.+|+|.|.|.+.+
T Consensus 14 ~G~~v~L~C~~s~~~~~~v~W~rq~~g~~~~~l~~~~~~~~~~~~~R~~~~~~~~~~~~sL~I~~v~~~Dsg~Y~C~~~~ 93 (203)
T 2bnu_A 14 EGENLVLNCSFTDSAIYNLQWFRQDPGKGLTSLLLIQSSQREQTSGRLNASLDKSSGRSTLYIAASQPGDSATYLCAVRP 93 (203)
T ss_dssp TTCCEEEEEEESCCCEEEEEEEEECTTSCEEEEEEEETTCSEEEETTEEEEEETTTTEEEEEESSCCGGGCEEEEEEEEE
T ss_pred CCCCEEEEEEECCCCcceEEEEEeCCCCCcEEEEEECCCCccccCCCeEEEEcCCCCEEEEEEeeCCcccCeEEEEEEEc
Confidence 4899999999976555579999732 11 1 00 1124789999999999999999986
Q ss_pred CC---CC--ceeEeeEEEeeec--CCCeeeecCCccccCCCCcEEEEeEEcc-CCCCeE
Q psy12725 56 EQ---ES--AQASGELKLGGRF--DPPVIKESFSDETLNPGPNYYFKCIASG-NPTPEI 106 (119)
Q Consensus 56 ~~---~~--~~~~~~~~v~~~~--~~~~~~~~~~~~~~~~g~~~~l~C~~~~-~p~~~~ 106 (119)
.. .. ......+.|.... ..|.+..... ....+.|.|.+.+ .|.|.+
T Consensus 94 ~~~~~~~~~~g~gt~L~V~~~~~~~~P~V~~~~~-----~~~~~~L~C~~~g~~P~p~v 147 (203)
T 2bnu_A 94 TSGGSYIPTFGRGTSLIVHPYIQNPDPAVYQLRR-----SKSSDKSVCLFTDFDSQTNV 147 (203)
T ss_dssp CSSSTTCCEECCCEEEEEECCCSSCCCEEEEECC-----SSSSSCEEEEEESCCTTCCC
T ss_pred CcCcceeeeeCCCEEEEEeCCCCCCCCeEEecCC-----CCCCcEEEEEccccccCccc
Confidence 41 11 1122345554321 2344433221 1237899999988 576655
No 398
>4i0k_A CD276 antigen; immunoglobulin domain, glycoprotein, immunity, adaptive IMMU structural genomics, protein structure initiative; HET: NAG BMA MAN; 2.97A {Mus musculus}
Probab=99.11 E-value=7.9e-10 Score=62.16 Aligned_cols=69 Identities=23% Similarity=0.467 Sum_probs=53.0
Q ss_pred CCccEEEEEEe-ccCCCCeeEEee-CCccCCCC--------CC---CeEEEecCCCCCCeEEEEEEEcCCCCceeEeeEE
Q psy12725 1 MLALKFFTCKY-EGNPVKTISWMK-DGKPVPDH--------NE---PVFRIDSVRKEDKGMYQCVIRNEQESAQASGELK 67 (119)
Q Consensus 1 ~g~~~~l~c~~-~~~~~~~v~w~~-~~~~~~~~--------~~---~~l~~~~~~~~d~g~y~C~~~~~~~~~~~~~~~~ 67 (119)
.|+.+.|.|.+ .+.|.+.+.|++ ++..+... .. ..+.+..++.+|.|.|+|.+.|..+.......+.
T Consensus 124 ~G~~~~l~C~~~~g~P~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~v~~~d~G~Y~C~a~n~~g~~~~~~~l~ 203 (222)
T 4i0k_A 124 PGNMVTITCSSYQGYPEAEVFWKDGQGVPLTGNVTTSQMANERGLFDVHSVLRVVLGANGTYSCLVRNPVLQQDAHGSVT 203 (222)
T ss_dssp CCSEEEEEEEEEEEBSCCEEEEECTTSCBCCSEEEEEEEECTTSCEEEEEEEEEECCTTCEEEEEEEETTTTEEEEEEEE
T ss_pred CCceEEEEEecccccCCCeEEEEcCCCccCCCCcceeEEcCCCCeEEEEEEEEEEeCCCCEEEEEEECCCCCCceEEEEE
Confidence 37899999999 778889999998 44444321 11 2367888999999999999999988776666666
Q ss_pred Ee
Q psy12725 68 LG 69 (119)
Q Consensus 68 v~ 69 (119)
+.
T Consensus 204 V~ 205 (222)
T 4i0k_A 204 IT 205 (222)
T ss_dssp CC
T ss_pred Ee
Confidence 64
No 399
>1mqk_L Antibody 7E2 FV fragment, light chain; membrane protein, cytochrome C oxidase, high- resolution structure, immune system; 1.28A {Mus musculus} SCOP: b.1.1.1 PDB: 1ar1_D 3ehb_D* 3hb3_D* 1qle_L* 1f6l_L 3iy2_A 1vfa_A 1dvf_A 1kir_A 1g7i_A 1g7j_A 1a2y_A 1kip_A 1kiq_A 1vfb_A 1g7h_A 1a7o_L 1g7l_A 1g7m_A 1a7n_L ...
Probab=99.10 E-value=5e-10 Score=57.68 Aligned_cols=56 Identities=21% Similarity=0.323 Sum_probs=43.2
Q ss_pred CCccEEEEEEeccCCCCeeEEeeCC--ccCC------------CC---------CCCeEEEecCCCCCCeEEEEEEEcC
Q psy12725 1 MLALKFFTCKYEGNPVKTISWMKDG--KPVP------------DH---------NEPVFRIDSVRKEDKGMYQCVIRNE 56 (119)
Q Consensus 1 ~g~~~~l~c~~~~~~~~~v~w~~~~--~~~~------------~~---------~~~~l~~~~~~~~d~g~y~C~~~~~ 56 (119)
.|+.|+|.|.+.+.+.+.+.|||.. .... .. ....|.|.+++.+|+|.|.|.+.+.
T Consensus 15 ~G~~v~L~C~~~~~~~~~v~W~r~~~g~~~~~li~~~~~~~~~~~~R~~~~~~~~~~~L~I~~v~~~DsG~Y~C~~~~~ 93 (120)
T 1mqk_L 15 VGETVTITCRASENIYSYLAWYQQKQGKSPQFLVYNAKTLGEGVPSRFSGSGSGTQFSLKINSLLPEDFGSYYCQHHYG 93 (120)
T ss_dssp TTCCEEEEEEESSCCTTCEEEEEECTTSCCEEEEETTTEECTTCCTTEEEEEETTEEEEEESSCCGGGCEEEEEEECSS
T ss_pred CCCcEEEEEEeCCCCCceEEEEEECCCCCCEEEEEeCCcCCCCCCceEEEeccCCEEEEEECCCCHHHCEEEEEEEEeC
Confidence 4899999999988777889999843 2110 00 1246899999999999999999875
No 400
>4f80_A Butyrophilin subfamily 3 member A1; B7 superfamily, CD277, immune system; 1.94A {Homo sapiens} PDB: 4f9l_A* 4f9p_A 4f8t_A 4f8q_A
Probab=99.10 E-value=1.9e-10 Score=65.05 Aligned_cols=67 Identities=16% Similarity=0.281 Sum_probs=45.3
Q ss_pred CccEEEEEEecc-CCCCeeEEeeCCc-cCCCC-------CCC---eEEEecCCCCCCeEEEEEEEcCCCCceeEeeEEE
Q psy12725 2 LALKFFTCKYEG-NPVKTISWMKDGK-PVPDH-------NEP---VFRIDSVRKEDKGMYQCVIRNEQESAQASGELKL 68 (119)
Q Consensus 2 g~~~~l~c~~~~-~~~~~v~w~~~~~-~~~~~-------~~~---~l~~~~~~~~d~g~y~C~~~~~~~~~~~~~~~~v 68 (119)
|+.+.|.|.+.+ .|.+.|.|++++. .+... ... .+.+..++.+|.|.|+|.+.|..+.......+.|
T Consensus 133 g~~v~l~c~~~g~~P~p~i~W~k~~~~~~~~~~~~~~~~~~g~~~v~s~l~v~~~d~G~YtC~a~N~~g~~~~~~~v~v 211 (226)
T 4f80_A 133 DGGIHLECRSTGWYPQPQIQWSNNKGENIPTVEAPVVADGVGLYAVAASVIMRGSSGEGVSCTIRSSLLGLEKTASISI 211 (226)
T ss_dssp TTEEEEEEEEEEEBSCCEEEEECTTSCBCCCEECCCEECTTSCEEEEEEEEECC----CEEEEEEETTTTEEEEEEECC
T ss_pred CCceeeEEEeccCCCCCEEEEEECCceEcCCCceEEEECCCCcEEEEEEEEechhcCcEEEEEEEeCCCCeEEEEEEEE
Confidence 788999999987 4899999998653 33221 111 2344567889999999999999877766666655
No 401
>3sbw_C Programmed cell death 1 ligand 1; PD-1, PD-L1, B7-H1, programmed death-1 ligand 1, complex, costimulatory, immune system; 2.28A {Homo sapiens} PDB: 3fn3_A 3bis_A 3bik_A
Probab=99.10 E-value=3.2e-10 Score=63.74 Aligned_cols=69 Identities=16% Similarity=0.357 Sum_probs=49.5
Q ss_pred CCccEEEEEEeccCCCCeeEEeeC-CccCCCC--------CCCe---EEEecCCCCCCeEEEEEEEcCCCCceeEeeEEE
Q psy12725 1 MLALKFFTCKYEGNPVKTISWMKD-GKPVPDH--------NEPV---FRIDSVRKEDKGMYQCVIRNEQESAQASGELKL 68 (119)
Q Consensus 1 ~g~~~~l~c~~~~~~~~~v~w~~~-~~~~~~~--------~~~~---l~~~~~~~~d~g~y~C~~~~~~~~~~~~~~~~v 68 (119)
.|+.+.|.|.+.+.|.+.+.|+++ +..+... .... .....++..|.|.|+|.+.|..+.......+.+
T Consensus 130 ~g~~v~L~C~~~g~P~p~i~W~~~~g~~~~~~~~~~~~~~~~~~~~~~~~l~v~~~d~g~Y~C~a~n~~g~~~~~~~l~v 209 (222)
T 3sbw_C 130 VTSEHELTCQAEGYPKAEVIWTSSDHQVLSGKTTTTNSKREEKLFNVTSTLRINTTTNEIFYCTFRRLDPEENHTAELVI 209 (222)
T ss_dssp TTTEEEEEEEEEEBSCCEEEEEETTCCEECCEEEEEECC----CEEEEEEEEEECCTTCEEEEEEEETTTTEEEEEEEEC
T ss_pred CCCcEEEEEEecCCCCCeEEEEECCCceecCccceEEEcCCCCCEEEEEEEEEeccCCcEEEEEEEeCccceeeEEEEEe
Confidence 378899999999999999999998 5444321 1111 122345678999999999999887766666665
Q ss_pred e
Q psy12725 69 G 69 (119)
Q Consensus 69 ~ 69 (119)
.
T Consensus 210 ~ 210 (222)
T 3sbw_C 210 P 210 (222)
T ss_dssp C
T ss_pred c
Confidence 3
No 402
>2or8_A Hepatitis A virus cellular receptor 1 homolog; beta barrel, immunoglobulin fold, IGV domain, TIM, immune system; 2.50A {Mus musculus}
Probab=99.09 E-value=7.7e-10 Score=56.41 Aligned_cols=70 Identities=16% Similarity=0.287 Sum_probs=47.6
Q ss_pred CCccEEEEEEecc-CCCCeeEEeeCCcc----C---------------C---------CCCCCeEEEecCCCCCCeEEEE
Q psy12725 1 MLALKFFTCKYEG-NPVKTISWMKDGKP----V---------------P---------DHNEPVFRIDSVRKEDKGMYQC 51 (119)
Q Consensus 1 ~g~~~~l~c~~~~-~~~~~v~w~~~~~~----~---------------~---------~~~~~~l~~~~~~~~d~g~y~C 51 (119)
.|+.|+|.|.+.. .....+.||+.... . . .....+|.|.+++.+|+|.|.|
T Consensus 11 ~G~~v~L~C~~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~sL~I~~v~~~DsG~Y~C 90 (116)
T 2or8_A 11 VGHPVTLPCTYSTYRGITTTCWGRGQCPSSACQNTLIWTNGHRVTYQKSSRYNLKGHISEGDVSLTIENSVESDSGLYCC 90 (116)
T ss_dssp TTSCEEECCBCCCTTCCCCEEEEESCCCSSSCTTEEEEECSSSEEEESSTTEECCSCGGGTBCCEEESSCCGGGCEEEEE
T ss_pred eCCcEEEEEEeeCCCCCcEEEEEEECCCCCCceEEEEEeCCcccCcCCCCeEEEecCCCCCeEEEEECCCCcccCEEEEE
Confidence 4899999999865 34567999986511 0 0 0123579999999999999999
Q ss_pred EEEcCCCCceeEeeEEEee
Q psy12725 52 VIRNEQESAQASGELKLGG 70 (119)
Q Consensus 52 ~~~~~~~~~~~~~~~~v~~ 70 (119)
.+.+..........+.+.+
T Consensus 91 ~v~~~~~~~~~~~~~~l~V 109 (116)
T 2or8_A 91 RVEIPGWFNDQKVTFSLQV 109 (116)
T ss_dssp EECCSSTTCCEEEEEEEEE
T ss_pred EEEcCCcccccEEEEEEEE
Confidence 9987643332244444443
No 403
>1qfw_M FV, antibody (anti beta subunit) (light chain); glycoprotein hormone; HET: NAG; 3.50A {Mus musculus} SCOP: b.1.1.1
Probab=99.07 E-value=7.1e-10 Score=56.01 Aligned_cols=56 Identities=23% Similarity=0.391 Sum_probs=42.7
Q ss_pred CCccEEEEEEeccCCCCeeEEeeCC--cc---C-----------CC-------CCCCeEEEecCCCCCCeEEEEEEEcC
Q psy12725 1 MLALKFFTCKYEGNPVKTISWMKDG--KP---V-----------PD-------HNEPVFRIDSVRKEDKGMYQCVIRNE 56 (119)
Q Consensus 1 ~g~~~~l~c~~~~~~~~~v~w~~~~--~~---~-----------~~-------~~~~~l~~~~~~~~d~g~y~C~~~~~ 56 (119)
.|+.|+|.|.+.+.+.+.+.|||.. .. + .. .....|.|.+++.+|+|.|.|.+.+.
T Consensus 15 ~G~~v~L~C~~~~~~~~~v~W~r~~~~~~~~~l~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~DsG~Y~C~~~~~ 93 (108)
T 1qfw_M 15 VGERVTLSCKASETVDSFVSWYQQKPEQSPKLLIFGASNRFSGVPDRFTGSGSATDFTLTISSVQAEDFADYHCGQTYN 93 (108)
T ss_dssp TTCCEEEEEEESSCCCSCEEEEEECTTSCCEEEECSSSCBCTTCCTTEECCBCSSEEEEEESSCCTTCCSEEEEEECSS
T ss_pred CCCCEEEEeeeCCCCCcEEEEEEECCCCCCEEEEEEcCccCCCCCCcEEEEcCCCEEEEEECCCChhhCEEEEEEEccC
Confidence 4899999999987777789999843 11 1 00 01236999999999999999999875
No 404
>2edo_A CD48 antigen; beta-sandwich, IG-fold, B-lymphocyte activation marker blast-1, BCM1 surface antigen, leukocyte antigen MEM-102, TCT.1; NMR {Homo sapiens}
Probab=99.06 E-value=2.3e-10 Score=59.04 Aligned_cols=76 Identities=14% Similarity=0.147 Sum_probs=49.6
Q ss_pred CCccEEEEEEec-cCCCCeeEEeeCCc-cC----------C-C---------CCCCeEEEecCCCCCCeEEEEEEEcCCC
Q psy12725 1 MLALKFFTCKYE-GNPVKTISWMKDGK-PV----------P-D---------HNEPVFRIDSVRKEDKGMYQCVIRNEQE 58 (119)
Q Consensus 1 ~g~~~~l~c~~~-~~~~~~v~w~~~~~-~~----------~-~---------~~~~~l~~~~~~~~d~g~y~C~~~~~~~ 58 (119)
+|+.|+|.|... ......+.||+... .+ . . ....+|.|.+++..|+|.|.|.+.+..+
T Consensus 18 ~G~~VtL~c~~~~~~~~~~i~W~~~~~~~i~~~~~~~~~~~~~~f~~R~~l~~~~~sL~I~nv~~~DsG~Y~c~v~~~~~ 97 (121)
T 2edo_A 18 SGSNVTLNISESLPENYKQLTWFYTFDQKIVEWDSRKSKYFESKFKGRVRLDPQSGALYISKVQKEDNSTYIMRVLKKTG 97 (121)
T ss_dssp TTSCEEECCSSCCCSSEEEEEEEEETTEEEEEECSSCEEECSCTTTTTCEECTTTCCEEESSCCGGGCSEEEEEEEETTT
T ss_pred eCCCEEEeCCCCCCCceeEEEEEcCCCCeEEEEECcCCeEeChhcCCcEEEeCCCceEEEeCCCHHHCeEEEEEEEcCCC
Confidence 489999999873 33345799998642 10 0 0 1346899999999999999999987543
Q ss_pred C-ceeEeeEEEeeecCCCe
Q psy12725 59 S-AQASGELKLGGRFDPPV 76 (119)
Q Consensus 59 ~-~~~~~~~~v~~~~~~~~ 76 (119)
. ....+.+.|......|.
T Consensus 98 ~~~~~~~~L~V~~~~~~P~ 116 (121)
T 2edo_A 98 NEQEWKIKLQVLDPVPKPV 116 (121)
T ss_dssp EEEECCEECEEECCSCCCC
T ss_pred cEEEEEEEEEEECCCCCCE
Confidence 2 23344555543333343
No 405
>3d9a_L Light chain of hyhel10 antibody fragment (FAB); lysozyme, antigen, allergen, antimic bacteriolytic enzyme, glycosidase, hydrolase; 1.20A {Mus musculus} PDB: 3hfm_L 1xgp_A 1xgq_A 1xgr_A 1xgt_A 1dqq_A 1dqm_L 1dqj_A 1nby_A 1nbz_A 1ndg_A 1ndm_A 1xgu_A 1fh5_L 1bm3_L 1opg_L 1mlb_A 1mlc_A 1rih_L 1p2c_A ...
Probab=99.06 E-value=1.7e-10 Score=64.55 Aligned_cols=59 Identities=14% Similarity=0.322 Sum_probs=46.7
Q ss_pred CccEEEEEEecc-CCCC-eeEEeeCCccCCCC-----------CC-----CeEEEecCCCCCCeEEEEEEEcCCCCc
Q psy12725 2 LALKFFTCKYEG-NPVK-TISWMKDGKPVPDH-----------NE-----PVFRIDSVRKEDKGMYQCVIRNEQESA 60 (119)
Q Consensus 2 g~~~~l~c~~~~-~~~~-~v~w~~~~~~~~~~-----------~~-----~~l~~~~~~~~d~g~y~C~~~~~~~~~ 60 (119)
|+.+.|.|.+.+ .|.+ .+.|++++..+... .. ..|.|..+..+|.|.|+|.+.|.....
T Consensus 127 g~~~~l~C~~~g~~p~~~~v~W~k~g~~~~~~~~~~~~~~~~~~~~~~~~s~L~i~~~~~~d~G~Y~C~a~n~~~~~ 203 (213)
T 3d9a_L 127 SGGASVVCFLNNFYPKDINVKWKIDGSERQNGVLNSWTDQDSKDSTYSMSSTLTLTKDEYERHNSYTCEATHKTSTS 203 (213)
T ss_dssp TTEEEEEEEEEEEBSSCCEEEEEETTEEECTTEEEEECCCCTTTCCEEEEEEEEEEHHHHHHCCEEEEEEECTTCSS
T ss_pred CCcEEEEEEEeeecCCceEEEEEcCCCcCcceeeecCCCccCCCCCEEEEEEEEEeccccCCCCEEEEEEEEccCCC
Confidence 678999999987 4554 89999998776432 11 278899999999999999999986543
No 406
>3kgr_A LAIR-1, hlair1, leukocyte-associated immunoglobulin-like receptor; IG-like domain, cell membrane, glycoprotein; 1.80A {Homo sapiens} PDB: 3rp1_A
Probab=99.06 E-value=5.2e-10 Score=56.42 Aligned_cols=54 Identities=26% Similarity=0.443 Sum_probs=42.7
Q ss_pred CccEEEEEEeccCCCCeeEEeeCCccCC-----------CCCCCeEEEecCCCCCCeEEEEEEEcC
Q psy12725 2 LALKFFTCKYEGNPVKTISWMKDGKPVP-----------DHNEPVFRIDSVRKEDKGMYQCVIRNE 56 (119)
Q Consensus 2 g~~~~l~c~~~~~~~~~v~w~~~~~~~~-----------~~~~~~l~~~~~~~~d~g~y~C~~~~~ 56 (119)
|+.|+|.|.... ....+.|+|++.... ......+.|..++..|.|.|.|...+.
T Consensus 23 G~~VtL~C~~~~-~~~~f~l~k~g~~~~~~~~~~~~~~~~~~~~~f~i~~vt~~~aG~Y~C~~~~~ 87 (106)
T 3kgr_A 23 GSHVTFVCRGPV-GVQTFRLERESRSTYNDTEDVSQASPSESEARFRIDSVSEGNAGPYRCIYYKP 87 (106)
T ss_dssp TCCEEEEEEECT-TCCEEEEEEGGGTEEEEECCCEEEETTEEEEEEEESSCCGGGCEEEEEEEEET
T ss_pred CCeEEEEEEccC-CCcEEEEEECCCccccccccccccCCCCcceEEEecCCCcCCCceEEEEeeCC
Confidence 899999999865 345799999987551 113467899999999999999998764
No 407
>1ncn_A T lymphocyte activation antigen CD86; IG V, beta strands, immune system; 2.70A {Homo sapiens} SCOP: b.1.1.1 PDB: 1i85_A
Probab=99.06 E-value=1e-09 Score=55.50 Aligned_cols=60 Identities=17% Similarity=0.480 Sum_probs=44.2
Q ss_pred CCccEEEEEEeccCCCC-----eeEEeeCCcc-C-------------C--C-------CCCCeEEEecCCCCCCeEEEEE
Q psy12725 1 MLALKFFTCKYEGNPVK-----TISWMKDGKP-V-------------P--D-------HNEPVFRIDSVRKEDKGMYQCV 52 (119)
Q Consensus 1 ~g~~~~l~c~~~~~~~~-----~v~w~~~~~~-~-------------~--~-------~~~~~l~~~~~~~~d~g~y~C~ 52 (119)
+|+.|.|.|.+.+.|.+ .+.|++.+.. + . . ....+|.|.+++.+|+|.|.|.
T Consensus 8 ~G~~v~L~C~~~~~~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~sL~I~~v~~~D~G~Y~C~ 87 (110)
T 1ncn_A 8 FNETADLPCQFANSQNQSLSELVVFWQDQENLVLNEVYLGKEKFDSVHSKYMGRTSFDSDSWTLRLHNLQIKDKGLYQCI 87 (110)
T ss_dssp TTSCEEEECCCCCTTCCCGGGEEEEEEETTCCEEEEEETTEECCSSBCTTTTTSEEEETTTTEEEECSCCGGGCEEEEEE
T ss_pred eCCCEEEEeEeCCCCcCCCccEEEEEEeCCCccEEEEECCcccccccCcccCCcEEEECCCEEEEEcCCChHHCEEEEEE
Confidence 48999999998754433 4999986531 0 0 0 1246899999999999999999
Q ss_pred EEcCCCCc
Q psy12725 53 IRNEQESA 60 (119)
Q Consensus 53 ~~~~~~~~ 60 (119)
+.+..+..
T Consensus 88 v~~~~~~~ 95 (110)
T 1ncn_A 88 IHHKKPTG 95 (110)
T ss_dssp EEEECSSS
T ss_pred EEcCCCCc
Confidence 98875443
No 408
>3p2t_A Leukocyte immunoglobulin-like receptor subfamily 4; LILR, IG, inhibitory receptor, disulfide, immune system; 1.70A {Homo sapiens}
Probab=99.05 E-value=2.5e-10 Score=63.24 Aligned_cols=57 Identities=18% Similarity=0.287 Sum_probs=46.4
Q ss_pred CCccEEEEEEeccCCCCeeEEeeCCccCCCC----------CCCeEEEecCCCCCCeEEEEEEEcCCC
Q psy12725 1 MLALKFFTCKYEGNPVKTISWMKDGKPVPDH----------NEPVFRIDSVRKEDKGMYQCVIRNEQE 58 (119)
Q Consensus 1 ~g~~~~l~c~~~~~~~~~v~w~~~~~~~~~~----------~~~~l~~~~~~~~d~g~y~C~~~~~~~ 58 (119)
.|+.++|.|.+.+ +.+.+.|+|++..+... ....|.|.+++.+|.|.|.|.+.|..+
T Consensus 113 ~G~~v~L~C~~~~-~~~~~~w~k~g~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~n~~~ 179 (196)
T 3p2t_A 113 SGKSVTLLCQSRS-PMDTFLLCKERAAHPLLCLRSEHGAQQHQAEFPMSPVTSVHGGTYRCFSSHGFS 179 (196)
T ss_dssp TTCCEEEEEEEEE-EEEEEEEEETTCCCGGGSEEEEEEEEEEEEEEEECSCCGGGCEEEEEEEECGGG
T ss_pred CCCeEEEEEecCC-CCCEEEEEeCCCcccceeecccccccCcceEEEeCCCcccCCCeEEEEEEcCCC
Confidence 3889999999987 44689999998765321 245799999999999999999999754
No 409
>2ghw_B Anti-SARS SCFV antibody, 80R; S protein, neutralizing antibody, virus/viral protein/antibiotic complex; 2.30A {Homo sapiens} SCOP: b.1.1.1 b.1.1.1
Probab=99.05 E-value=1.1e-09 Score=62.62 Aligned_cols=57 Identities=16% Similarity=0.332 Sum_probs=44.9
Q ss_pred CCccEEEEEEeccCCCCeeEEee--CCccCC---------------------CCCCCeEEEecCCCCCCeEEEEEEEcCC
Q psy12725 1 MLALKFFTCKYEGNPVKTISWMK--DGKPVP---------------------DHNEPVFRIDSVRKEDKGMYQCVIRNEQ 57 (119)
Q Consensus 1 ~g~~~~l~c~~~~~~~~~v~w~~--~~~~~~---------------------~~~~~~l~~~~~~~~d~g~y~C~~~~~~ 57 (119)
.|+.++|.|.+.+.+.+.+.|+| ++..+. ......|.|.+++.+|.|.|.|.+.+..
T Consensus 149 ~G~~v~L~C~~~~~~~~~v~W~k~~~g~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~~~~ 228 (247)
T 2ghw_B 149 PGERATLSCRASQSVRSNLAWYQQKPGQAPRPLIYDASTRATGIPDRFSGSGSGTDFTLTISRLEPEDFAVYYCQQRSNW 228 (247)
T ss_dssp TTSCEEEEEEESSCCTTCEEEEEECTTSCCEEEEETTTEECTTCCTTEEEECSSSEEEEEECSCCGGGCEEEEEEECSSS
T ss_pred CCCcEEEEEEeCCCccceEEEEEECCCCCcEEEEEEeccCCCccCCCEEEecCCCeEEEEECcCCHHHCEEEEEEEccCC
Confidence 38999999999988888999999 444331 0112359999999999999999998753
No 410
>1xau_A B- and T-lymphocyte attenuator; IG domain, beta sandwich, structural genomics, PSI, protein structure initiative; 1.80A {Mus musculus} SCOP: b.1.1.4
Probab=99.05 E-value=1.5e-09 Score=54.29 Aligned_cols=60 Identities=17% Similarity=0.295 Sum_probs=45.6
Q ss_pred CCccEEEEEEecc-CCCCeeEEeeCCc----cCCC--C-----------CCCeEEEecCCCCCCeEEEEEEEcCCCCc
Q psy12725 1 MLALKFFTCKYEG-NPVKTISWMKDGK----PVPD--H-----------NEPVFRIDSVRKEDKGMYQCVIRNEQESA 60 (119)
Q Consensus 1 ~g~~~~l~c~~~~-~~~~~v~w~~~~~----~~~~--~-----------~~~~l~~~~~~~~d~g~y~C~~~~~~~~~ 60 (119)
.|+++.|.|.+.+ .+.|+|+|.|.+. .+.. + ....|.|..+...|.|.|.|.+.+..+..
T Consensus 28 ~G~~~~LeCpv~yc~~rPnVtWcK~~~~~c~~L~~~~q~~~~w~e~~n~s~fiL~f~~V~~sDsG~YrCsAn~~~g~i 105 (122)
T 1xau_A 28 TGELFKIECPVKYCVHRPNVTWCKHNGTIWVPLEVGPQLYTSWEENRSVPVFVLHFKPIHLSDNGSYSCSTNFNSQVI 105 (122)
T ss_dssp TTSCEEEEEEEECSSSCCCEEEEEECSSSEEECCCBTTEEEEEECSSSSCEEEEEETTCCGGGCEEEEEEEEETTEEE
T ss_pred cCCeEEEEeEecCCCCCCcEEEEecCCeeccccccceeeecceeccCCceeEEEEEeeEEEcCCccEEEEeeCCCCce
Confidence 4899999999976 4789999999542 2211 1 12378899999999999999999875443
No 411
>1dr9_A B7-1 (CD80), T lymphocyte activation antigen; IG superfamily, immune system; HET: NAG; 3.00A {Homo sapiens} SCOP: b.1.1.1 b.1.1.3 PDB: 1i8l_A*
Probab=99.05 E-value=1.7e-09 Score=60.01 Aligned_cols=60 Identities=13% Similarity=0.383 Sum_probs=44.4
Q ss_pred CccEEEEEEec-cCCCCeeEEeeCCccCCCC--------CCCeE---EEecCCCCCCeEEEEEEEcCCCCce
Q psy12725 2 LALKFFTCKYE-GNPVKTISWMKDGKPVPDH--------NEPVF---RIDSVRKEDKGMYQCVIRNEQESAQ 61 (119)
Q Consensus 2 g~~~~l~c~~~-~~~~~~v~w~~~~~~~~~~--------~~~~l---~~~~~~~~d~g~y~C~~~~~~~~~~ 61 (119)
|+.+.|.|.+. +.|.+.|.|++++..+... ....+ .+..++..|.|.|+|.+.|..+...
T Consensus 121 g~~~~l~C~~~~g~P~p~i~W~k~g~~l~~~~~~~~~~~~~~~~~~~~~~~v~~~d~g~Y~C~a~n~~~~~s 192 (201)
T 1dr9_A 121 SNIRRIICSTSGGFPEPHLSWLENGEELNAINTTVSQDPETELYAVSSKLDFNMTTNHSFMCLIKYGHLRVN 192 (201)
T ss_dssp TTEEEEEEEEEEESSCEEEEEEESSCEECCSEEEEEECTTTCCEEEEEEEEEETTSCEEEEEEEEETTCCEE
T ss_pred CCeEEEEEecCCccCCCEEEEEECCEECccccceEEecCCCcEEEEEEEEEEEecCCCEEEEEEecCcceee
Confidence 67889999995 8899999999998876532 11221 2344567899999999999876543
No 412
>1lk3_L 9D7 light chain; antigen-antibody complex, immune system; 1.91A {Rattus norvegicus} SCOP: b.1.1.1 b.1.1.2 PDB: 1fn4_A 1c5d_L 1bfo_A 3b9k_L*
Probab=99.04 E-value=9.9e-10 Score=61.37 Aligned_cols=58 Identities=17% Similarity=0.400 Sum_probs=45.3
Q ss_pred CccEEEEEEeccC-CCC-eeEEeeCCccCCCC----------CC------CeEEEecCCCCCCeEEEEEEEcCCCC
Q psy12725 2 LALKFFTCKYEGN-PVK-TISWMKDGKPVPDH----------NE------PVFRIDSVRKEDKGMYQCVIRNEQES 59 (119)
Q Consensus 2 g~~~~l~c~~~~~-~~~-~v~w~~~~~~~~~~----------~~------~~l~~~~~~~~d~g~y~C~~~~~~~~ 59 (119)
|+.++|.|.+.+. |.+ .+.|++++..+... .. ..|.|..+..+|.|.|+|.+.|....
T Consensus 126 g~~v~l~C~~~g~~p~~~~v~W~k~g~~~~~~~~~~~~~~~~~~~~~~~~s~L~i~~~~~~d~G~Y~C~a~n~~~~ 201 (210)
T 1lk3_L 126 TGGASVVCLMNNFYPRDISVKWKIDGTERRDGVLDSVTDQDSKDSTYSMSSTLSLTKADYESHNLYTCEVVHKTSS 201 (210)
T ss_dssp TTEEEEEEEEEEEBSSCCEEEEEETTEECCTTEEEEECCCCTTTCCEEEEEEEEEEHHHHHTCCEEEEEEECTTCS
T ss_pred CCcEEEEEEEEeEeCCceEEEEEeCCccCCCCceEccCCccCCCCCEEEEEEEEEChHHhccCCcEEEEEEecCCC
Confidence 7899999999873 543 89999999876432 11 15888888899999999999997643
No 413
>1neu_A Myelin P0 protein; structural protein, glycoprotein, transmembrane, phosphorylation, immunoglobulin fold, signal; 1.90A {Rattus norvegicus} SCOP: b.1.1.1
Probab=99.04 E-value=1.2e-09 Score=56.21 Aligned_cols=59 Identities=12% Similarity=0.340 Sum_probs=41.0
Q ss_pred CCccEEEEEEeccC----CCCeeEEeeCCcc------C----------------CC---------CCCCeEEEecCCCCC
Q psy12725 1 MLALKFFTCKYEGN----PVKTISWMKDGKP------V----------------PD---------HNEPVFRIDSVRKED 45 (119)
Q Consensus 1 ~g~~~~l~c~~~~~----~~~~v~w~~~~~~------~----------------~~---------~~~~~l~~~~~~~~d 45 (119)
.|+.|+|.|.+... +...+.|++.+.. + .. ....+|.|.+++.+|
T Consensus 13 ~G~~v~L~C~~~~~~~~~~~~~v~W~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~sL~I~~v~~~D 92 (124)
T 1neu_A 13 VGSQVTLHCSFWSSEWVSDDISFTWRYQPEGGRDAISIFHYAKGQPYIDEVGTFKERIQWVGDPSWKDGSIVIHNLDYSD 92 (124)
T ss_dssp TTSCEEECCEEECSSCCCSCCEEEEEEEETTCCCCEEEEEEETTEEEECSSSTTTTCEEECCBGGGTBCCEEECSCCGGG
T ss_pred eCCeEEEEeEEeCCCCCCCceEEEEEEcCCCCCceEEEEEecCCeeccccCccccCcEEEecCCcCCeEEEEEccCChhh
Confidence 48999999998542 4568999974320 0 00 023579999999999
Q ss_pred CeEEEEEEEcCCCC
Q psy12725 46 KGMYQCVIRNEQES 59 (119)
Q Consensus 46 ~g~y~C~~~~~~~~ 59 (119)
+|.|.|.+.+..+.
T Consensus 93 ~G~Y~C~v~~~~~~ 106 (124)
T 1neu_A 93 NGTFTCDVKNPPDI 106 (124)
T ss_dssp CEEEEEEEEC----
T ss_pred CEEEEEEEEcCCCC
Confidence 99999999986543
No 414
>1xt5_A Variable region-containing chitin-binding protein 3; innate immunity, VCBP, primordial antigen receptor, florida lancelet, amphioxus; 1.15A {Branchiostoma floridae}
Probab=99.04 E-value=2.2e-09 Score=56.07 Aligned_cols=58 Identities=24% Similarity=0.434 Sum_probs=43.4
Q ss_pred CCccEEEEEEecc---CCCCeeEEeeCCccC-----------------------------C---C------CCCCeEEEe
Q psy12725 1 MLALKFFTCKYEG---NPVKTISWMKDGKPV-----------------------------P---D------HNEPVFRID 39 (119)
Q Consensus 1 ~g~~~~l~c~~~~---~~~~~v~w~~~~~~~-----------------------------~---~------~~~~~l~~~ 39 (119)
.|+.|+|.|.+.. .+.+.+.||+..... . . ....+|.|.
T Consensus 18 ~G~~v~L~C~~~~~~~~~~~~v~W~k~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~sL~I~ 97 (135)
T 1xt5_A 18 AGGTVELPCSYQLANDTQPPVISWLKGASPDRSTKVFKGNYNWQGEGLGFVESDSYKESFGDFLGRASVANLAAPTLRLT 97 (135)
T ss_dssp TTSCEEECCEEEEETCCSCCEEEEEEESSSSSEEEEEEEEECCCCTTCCCCTTSEEEEECGGGTTTEEESCTTSCCEEEC
T ss_pred CCCCEEEeeEeecCCCCCccEEEEEeeCCCCCceEEEEeccccccccccccccccccccChhhcCcEEEecCCCCeEEEC
Confidence 4899999999753 467789999854321 0 0 013679999
Q ss_pred cCCCCCCeEEEEEEEcCCC
Q psy12725 40 SVRKEDKGMYQCVIRNEQE 58 (119)
Q Consensus 40 ~~~~~d~g~y~C~~~~~~~ 58 (119)
+++.+|+|.|.|.+.+...
T Consensus 98 ~v~~~D~G~Y~C~v~~~~~ 116 (135)
T 1xt5_A 98 HVHPQDGGRYWCQVAQWSI 116 (135)
T ss_dssp SCCGGGCEEEEEEEECSSC
T ss_pred CCChhhCcEEEEEEEcCCc
Confidence 9999999999999998643
No 415
>1zox_A CLM-1; IG-superfamily, IG-V, NKP44-like, myeloid IG-like receptor, structural genomics, PSI, protein structure initiative; 2.10A {Mus musculus}
Probab=99.03 E-value=3.5e-09 Score=53.79 Aligned_cols=68 Identities=13% Similarity=0.196 Sum_probs=46.0
Q ss_pred CCccEEEEEEeccCC-CCeeEEeeCCcc-----C-CC-------------------CCCCeEEEecCCCCCCeEEEEEEE
Q psy12725 1 MLALKFFTCKYEGNP-VKTISWMKDGKP-----V-PD-------------------HNEPVFRIDSVRKEDKGMYQCVIR 54 (119)
Q Consensus 1 ~g~~~~l~c~~~~~~-~~~v~w~~~~~~-----~-~~-------------------~~~~~l~~~~~~~~d~g~y~C~~~ 54 (119)
.|+.|+|.|.+.+.. ...+.||+.... + .. .....|.|.+++.+|+|.|.|.+.
T Consensus 15 ~G~~v~L~C~~~~~~~~~~v~W~~~~~~~~~~~l~~~~~~~~~~~~~R~~~~~~~~~~~~sL~I~~~~~~DsG~Y~C~v~ 94 (113)
T 1zox_A 15 EQGSLTVQCRYTSGWKDYKKYWCQGVPQRSCKTLVETDASEQLVKKNRVSIRDNQRDFIFTVTMEDLRMSDAGIYWCGIT 94 (113)
T ss_dssp TTSCEEEEEEECGGGTTSCEEEEESSSGGGCEEEEECCSSSCCEEETTEEEEEETTTTEEEEEECSCCGGGCEEEEEEEC
T ss_pred CCCcEEEEeECCCCcccceEEEEeCCCCCCCeEEEEecCccccccCCCEEEEECCcCCEEEEEEccCCHHHCEEEEEeeE
Confidence 489999999997643 336999985421 1 00 012479999999999999999998
Q ss_pred cCCCCceeEeeEEE
Q psy12725 55 NEQESAQASGELKL 68 (119)
Q Consensus 55 ~~~~~~~~~~~~~v 68 (119)
+........+.+.|
T Consensus 95 ~~~~~~~~~v~L~V 108 (113)
T 1zox_A 95 KGGLDPMFKVTVNI 108 (113)
T ss_dssp CSSSCCEEEEEEEE
T ss_pred cCCCCccEEEEEEE
Confidence 86433333344443
No 416
>2ptt_A CD48 antigen; CD244, CD48, NK cell receptor, X-RAY, immune system; 1.63A {Mus musculus} PDB: 2ptv_A
Probab=99.03 E-value=1.6e-09 Score=54.82 Aligned_cols=57 Identities=25% Similarity=0.384 Sum_probs=43.3
Q ss_pred CCccEEEEEEe-ccCCCCeeEEeeCCcc-CC------------C---------CCCCeEEEecCCCCCCeEEEEEEEcCC
Q psy12725 1 MLALKFFTCKY-EGNPVKTISWMKDGKP-VP------------D---------HNEPVFRIDSVRKEDKGMYQCVIRNEQ 57 (119)
Q Consensus 1 ~g~~~~l~c~~-~~~~~~~v~w~~~~~~-~~------------~---------~~~~~l~~~~~~~~d~g~y~C~~~~~~ 57 (119)
.|+.|+|.|.. .+.+.+.+.||+.... +. . ....+|.|.+++.+|+|.|.|.+.+..
T Consensus 17 ~G~~v~L~C~~~~~~~~~~v~W~~~~~~~i~~~~~~~~~~~~~~~~~~R~~~~~~~~sL~I~~v~~~DsG~Y~C~v~~~~ 96 (110)
T 2ptt_A 17 TGSNVTLKIHKDPLGPYRRITWLHTKNQKILEYNYNSTKTIFESEFKGRVYLEENNGALHISNVRKEDKGTYYMRVLRET 96 (110)
T ss_dssp TTSCEEECSCSSCCCSCSEEEEEESTTBEEEEEETTSCEEECSSTTTTTEEECTTTCCEEESSCCGGGCEEEEEEEESSS
T ss_pred cCCcEEEeCCccCCCCcCEEEEEecCCccEEEEECCCCceeeccccCCcEEEeCCCccEEECCCCcccCeEEEEEEEcCC
Confidence 48999999998 5556678999984211 10 0 134679999999999999999998764
No 417
>2if7_A SLAM family member 6; NTB-A, homophilic receptor, immune system; 3.00A {Homo sapiens}
Probab=99.02 E-value=1.6e-09 Score=60.05 Aligned_cols=55 Identities=16% Similarity=0.346 Sum_probs=42.7
Q ss_pred cEEEEEEeccC-CCCeeEEeeCCccCCCCCCCeEEEecCCCC-CCeEEEEEEEcCCCCc
Q psy12725 4 LKFFTCKYEGN-PVKTISWMKDGKPVPDHNEPVFRIDSVRKE-DKGMYQCVIRNEQESA 60 (119)
Q Consensus 4 ~~~l~c~~~~~-~~~~v~w~~~~~~~~~~~~~~l~~~~~~~~-d~g~y~C~~~~~~~~~ 60 (119)
.++|.|.+.+. |.+.+.|++++..+. ....|.+...... |.|.|+|.+.|..+..
T Consensus 126 ~v~L~C~~~g~~p~p~i~W~~~g~~l~--~~~~l~i~~~~~~~d~G~Y~C~a~N~~g~~ 182 (193)
T 2if7_A 126 ELHLTCSVEDADDNVSFRWEALGNTLS--SQPNLTVSWDPRISSEQDYTCIAENAVSNL 182 (193)
T ss_dssp EEEEEEEEESCCTTCEEEEEETTEEEE--SSSEEEEEECTTTCSCCEEEEEEEETTEEE
T ss_pred eEEEEEEEecCCCceEEEEEeCCEEcC--CCCeEEEEeccCcCCCCcEEEEEECCCCcc
Confidence 79999999885 578999999988763 3456777544444 8999999999986543
No 418
>1h5b_A Murine T cell receptor (TCR) valpha domain; immune response, immunoglobulin fold; 1.85A {Mus musculus} SCOP: b.1.1.1 PDB: 1h5b_C 1h5b_B
Probab=99.02 E-value=1.7e-09 Score=54.98 Aligned_cols=57 Identities=14% Similarity=0.371 Sum_probs=42.7
Q ss_pred CCccEEEEEEeccCCCCeeEEeeCC--ccCC----------------------CCCCCeEEEecCCCCCCeEEEEEEEcC
Q psy12725 1 MLALKFFTCKYEGNPVKTISWMKDG--KPVP----------------------DHNEPVFRIDSVRKEDKGMYQCVIRNE 56 (119)
Q Consensus 1 ~g~~~~l~c~~~~~~~~~v~w~~~~--~~~~----------------------~~~~~~l~~~~~~~~d~g~y~C~~~~~ 56 (119)
.|+.|+|.|.+.+.+ +.+.|||.. ..+. ......|.|.+++.+|+|.|.|.+.+.
T Consensus 15 ~G~~v~L~C~~~~~~-~~v~W~r~~~~~~~~~l~~~~~~~~~~~r~~~~~~~~~~~~~~L~I~~v~~~DsG~Y~C~~~n~ 93 (113)
T 1h5b_A 15 EGTDSALRCNFTTTM-RSVQWFRQNSRGSLISLFYLASGTKENGRLKSAFDSERARYSTLHIRDAQLEDSGTYFCAAEAS 93 (113)
T ss_dssp TTCCEEEEEEESSCC-SEEEEEEECTTSCEEEEEEESSSEEEETTEEEECCSSSSSEEEEEECSCCGGGCEEEEEEEECS
T ss_pred cCCcEEEEEEECCCC-ceEEEEEECCCCCeEEEEEECCCCccCCceEEEEccCCCCEEEEEECCCChhhCEEEEEEEecC
Confidence 489999999998654 689999853 1110 011237999999999999999999986
Q ss_pred CC
Q psy12725 57 QE 58 (119)
Q Consensus 57 ~~ 58 (119)
.+
T Consensus 94 ~~ 95 (113)
T 1h5b_A 94 SG 95 (113)
T ss_dssp SS
T ss_pred CC
Confidence 43
No 419
>1hnf_A CD2; T lymphocyte adhesion glycoprotein; HET: NAG; 2.50A {Homo sapiens} SCOP: b.1.1.1 b.1.1.3 PDB: 1cdb_A 1gya_A* 1qa9_A
Probab=99.01 E-value=6.7e-10 Score=61.18 Aligned_cols=59 Identities=14% Similarity=0.233 Sum_probs=44.3
Q ss_pred cEEEEEEeccCCCCeeEEeeCCccCCCCCCCeEEEecCCCCCCeEEEEEEEcCCCCceeEe
Q psy12725 4 LKFFTCKYEGNPVKTISWMKDGKPVPDHNEPVFRIDSVRKEDKGMYQCVIRNEQESAQASG 64 (119)
Q Consensus 4 ~~~l~c~~~~~~~~~v~w~~~~~~~~~~~~~~l~~~~~~~~d~g~y~C~~~~~~~~~~~~~ 64 (119)
.+.|.|.+.+.|.+.|.|++++..+ ......+.+. ....|.|.|+|.+.|..+......
T Consensus 117 ~v~L~C~~~~~p~~~~~W~~~g~~l-~~~~~~i~~~-~~~~d~G~Y~C~a~N~~~~~~s~~ 175 (182)
T 1hnf_A 117 NTTLTCEVMNGTDPELNLYQDGKHL-KLSQRVITHK-WTTSLSAKFKCTAGNKVSKESSVE 175 (182)
T ss_dssp TTEEEEECSSCSSCEEEEEESSCEE-EEESSCEEEE-CCSCEEEEEEEEEECSSCEEEEEE
T ss_pred cEEEEeEccCCCCCEEEEEECCEEC-CCCCcEEEEe-cccCCCcEEEEEEEeCCCCcEEcc
Confidence 5789999998888899999999877 2233344433 357899999999999976554433
No 420
>1lp9_E T-cell receptor alpha chain; immunoregulatory complex, class I MHC:TCR CO-crystal, immune; 2.00A {Mus musculus} SCOP: b.1.1.1 b.1.1.2 PDB: 2j8u_E 2jcc_E 2uwe_E 1nfd_A*
Probab=99.01 E-value=3.7e-09 Score=58.78 Aligned_cols=101 Identities=12% Similarity=0.200 Sum_probs=61.9
Q ss_pred CCccEEEEEEeccCCCCeeEEeeCC--ccCC------------CC-----------CCCeEEEecCCCCCCeEEEEEEEc
Q psy12725 1 MLALKFFTCKYEGNPVKTISWMKDG--KPVP------------DH-----------NEPVFRIDSVRKEDKGMYQCVIRN 55 (119)
Q Consensus 1 ~g~~~~l~c~~~~~~~~~v~w~~~~--~~~~------------~~-----------~~~~l~~~~~~~~d~g~y~C~~~~ 55 (119)
.|+.|+|.|.+.+.....+.|||.. ..+. .. ....|.|.+++.+|.|.|.|.+.+
T Consensus 15 ~G~~v~L~C~~s~~~~~~v~Wyrq~~g~~~~~l~~~~~~~~~~~~~Rfs~~~~~~~~~~sL~I~~~~~~Dsg~Y~C~~~~ 94 (194)
T 1lp9_E 15 EGLPVMLNCTYQSTYSPFLFWYVQHLNEAPKLLLKSFTDNKRPEHQGFHATLHKSSSSFHLQKSSAQLSDSALYYCALFL 94 (194)
T ss_dssp TTSCEEECEEEECSSSCCEEEEEECTTSCCEEEEESCSSTTCCCCSSCEECCBGGGTBCCEEESSCCGGGCEEEEEEEEE
T ss_pred cCCCEEEEEEeCCCCCceEEEEEeCCCCCeEEEEEEcCCCCcccCCCeEEEecCCCCEEEEEEcccCcccCeeEEEEEec
Confidence 4899999999976656689999742 2110 00 124799999999999999999986
Q ss_pred C---CCC--ceeEeeEEEeeec--CCCeeeecCCccccCCCCcEEEEeEEccC-CCCeE
Q psy12725 56 E---QES--AQASGELKLGGRF--DPPVIKESFSDETLNPGPNYYFKCIASGN-PTPEI 106 (119)
Q Consensus 56 ~---~~~--~~~~~~~~v~~~~--~~~~~~~~~~~~~~~~g~~~~l~C~~~~~-p~~~~ 106 (119)
. ... ......+.|.... ..|.+..... ....++|.|.+.+. |.+.+
T Consensus 95 ~~~~~~~~~~g~gt~L~V~~~~~~~~P~V~~~~~-----~~~~~tL~Cl~~gf~P~~~V 148 (194)
T 1lp9_E 95 ASSSFSKLVFGQGTSLSVVPNIQNPEPAVYQLKD-----PRSQDSTLCLFTDFDSQINV 148 (194)
T ss_dssp CSSSSCEEEECCCEEEEEECCCSSCCCEEEEEEC-----TTSSSCEEEEEESCCTTSCC
T ss_pred ccCCcceeeeccCceEEecCcCCCCCCeeEecCC-----CCCCcEEEEEeecccCCccc
Confidence 3 111 1122344443311 1333332211 12368999999884 66555
No 421
>2xzc_L FAB A.17 light chain; immune system; HET: XOP; 1.36A {Homo sapiens} PDB: 2xza_L* 3kdm_L* 3nps_C 1dn0_A 1qlr_A* 2v7n_A 3eo0_A 3eo1_A 2agj_L* 2fx7_L 1tzg_L 2fx8_L 2fx9_L* 1u6a_L 3hi1_L* 3kym_A 3kyk_L 3qwo_L* 3ixt_L* 3qeg_L ...
Probab=99.01 E-value=2.2e-09 Score=60.21 Aligned_cols=59 Identities=14% Similarity=0.350 Sum_probs=45.4
Q ss_pred CccEEEEEEecc-CCCC-eeEEeeCCccCCCC----------CC------CeEEEecCCCCCCeEEEEEEEcCCCCc
Q psy12725 2 LALKFFTCKYEG-NPVK-TISWMKDGKPVPDH----------NE------PVFRIDSVRKEDKGMYQCVIRNEQESA 60 (119)
Q Consensus 2 g~~~~l~c~~~~-~~~~-~v~w~~~~~~~~~~----------~~------~~l~~~~~~~~d~g~y~C~~~~~~~~~ 60 (119)
|+.++|.|.+.+ .|.+ .|.|++++..+... .. +.|.|......|.|.|+|.+.|.....
T Consensus 129 g~~v~L~C~~~g~~P~~~~v~W~k~g~~~~~~~~~~~~~~~~~~g~~~~~s~L~i~~~~~~d~g~Y~C~a~n~~~~~ 205 (216)
T 2xzc_L 129 SGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSS 205 (216)
T ss_dssp TTEEEEEEEEEEEBSSCCEEEEEETTEECCSSEEEEECCCCTTTCCEEEEEEEEEEHHHHTTCCEEEEEEECTTCSS
T ss_pred CCcEEEEEEEEeEcCCceEEEEEECCeecCCCeeEecCcccCCCCCEEEEEEEEECHHHhCCCCcEEEEEEcCCCCC
Confidence 678999999987 4554 89999998766432 11 157888888899999999999986443
No 422
>1i1r_A GP130, interleukin-6 receptor beta chain; cytokine/receptor complex, GP130; 2.40A {Homo sapiens} SCOP: b.1.2.1 b.1.2.1 b.1.2.1 PDB: 1p9m_A
Probab=99.01 E-value=1.5e-08 Score=59.71 Aligned_cols=55 Identities=11% Similarity=0.171 Sum_probs=44.0
Q ss_pred CCccEEEEEEecc-------CCCCeeEEeeCCccCCCC-------CCCeEEEecCCCCCCeEEEEEEEcC
Q psy12725 1 MLALKFFTCKYEG-------NPVKTISWMKDGKPVPDH-------NEPVFRIDSVRKEDKGMYQCVIRNE 56 (119)
Q Consensus 1 ~g~~~~l~c~~~~-------~~~~~v~w~~~~~~~~~~-------~~~~l~~~~~~~~d~g~y~C~~~~~ 56 (119)
+|+.++|.|.+.+ .+.+.+.|++++..+... ....|.|.++...+ |.|.|.+.+.
T Consensus 18 ~G~~v~l~C~~~~~~~~~~~~p~p~i~W~~~g~~i~~~~~~~~~~~~~~L~i~~~~~~~-g~Y~C~a~~~ 86 (303)
T 1i1r_A 18 LHSNFTAVCVLKEKCMDYFHVNANYIVWKTNHFTIPKEQYTIINRTASSVTFTDIASLN-IQLTCNILTF 86 (303)
T ss_dssp TTCCEEEEEEECHHHHHHHTCCGGGEEEEETTEECCGGGCEEEETTEEEEEECSCCCSE-EEEEEEEEET
T ss_pred CCCCEEEEEEECCccccccCCChhheEEEECCEECChhheeeeCCcEEEEEEcCcCCCc-eEEEEecccC
Confidence 4899999999985 477899999999877432 12468899988874 9999999874
No 423
>1vca_A VCAM-D1,2, human vascular cell adhesion molecule-1; immunoglobulin superfamily, integrin-binding, cell adhesion protein; 1.80A {Homo sapiens} SCOP: b.1.1.3 b.1.1.4 PDB: 1ij9_A 1vsc_A
Probab=99.01 E-value=6.7e-10 Score=62.02 Aligned_cols=59 Identities=10% Similarity=0.115 Sum_probs=42.4
Q ss_pred CCccEEEEEEeccC-CC--CeeEEeeCCccCCCC---C----------CCeEEEecCCCCCCeEEEEEEEcCCCC
Q psy12725 1 MLALKFFTCKYEGN-PV--KTISWMKDGKPVPDH---N----------EPVFRIDSVRKEDKGMYQCVIRNEQES 59 (119)
Q Consensus 1 ~g~~~~l~c~~~~~-~~--~~v~w~~~~~~~~~~---~----------~~~l~~~~~~~~d~g~y~C~~~~~~~~ 59 (119)
.|+.++|.|.+.+. |. +.+.|+|++..+... . ...|.+......|.|.|+|.+.|..+.
T Consensus 105 ~G~~~~L~C~~~~~~p~~~~~i~W~k~~~~l~~~~~~~~~~~~~~~~~~~~l~i~~~~~d~~g~ytC~A~n~~~~ 179 (202)
T 1vca_A 105 AGKPITVKCSVADVYPFDRLEIDLLKGDHLMKSQEFLEDADRKSLETKSLEVTFTPVIEDIGKVLVCRAKLHIDE 179 (202)
T ss_dssp TTSCEEEEEEEEEEBSGGGEEEEEEETTEEEEEEECCSCCSSCCCEEEEEEEEECCCGGGTTCEEEEEEEECSCC
T ss_pred CCCCEEEEEEECCcCCCCCeEEEEEeCCeECcccccccccCcCcceEEEEEEEEEeeeccCCCeEEEEEEccccC
Confidence 48999999999875 33 378999998765311 0 123456666677889999999997654
No 424
>2ywz_A NEW antigen receptor variable domain; IG VNAR, immune system; 2.21A {Orectolobus maculatus} PDB: 2ywy_A
Probab=99.00 E-value=1.3e-09 Score=55.29 Aligned_cols=55 Identities=18% Similarity=0.389 Sum_probs=42.0
Q ss_pred CCccEEEEEEeccC--CCCeeEEeeCC--cc----CCC-----------CCCCeEEEecCCCCCCeEEEEEEEc
Q psy12725 1 MLALKFFTCKYEGN--PVKTISWMKDG--KP----VPD-----------HNEPVFRIDSVRKEDKGMYQCVIRN 55 (119)
Q Consensus 1 ~g~~~~l~c~~~~~--~~~~v~w~~~~--~~----~~~-----------~~~~~l~~~~~~~~d~g~y~C~~~~ 55 (119)
.|+.|+|.|.+.+. +.+.+.|||.. .. +.. .....|.|.+++.+|+|.|.|.+.+
T Consensus 14 ~G~~v~L~C~~~~~~~~~~~v~W~r~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~I~~v~~~DsG~Y~C~~~~ 87 (111)
T 2ywz_A 14 TGESLTIKCVLKDHSCGLSSTTWYRTQLGSTNEKTISIGGRYDETVDKGSKSFSLRISDLRVEDSGTYKCQADY 87 (111)
T ss_dssp TTCCEEEEEEEESCSSCCCEEEEEEEETTCCCCEECCSBTTEEEEEETTTTEEEEEECSCCGGGCEEEEEEEEE
T ss_pred cCCCEEEEeEECCCCCCCCEEEEEEeCCCCCceEeeEeCCCEEEEEeCCCCEEEEEECCCChhcCEEEEEEEEc
Confidence 48999999999765 46789999852 21 100 1234699999999999999999987
No 425
>2p1y_A Bispecific alpha/beta TCR; autoimmunity, immunoglobulin fold, diabody, immune system; 2.42A {Mus musculus} PDB: 1bwm_A
Probab=99.00 E-value=1.3e-09 Score=61.98 Aligned_cols=56 Identities=14% Similarity=0.315 Sum_probs=44.4
Q ss_pred CCccEEEEEEeccCCCCeeEEeeCCc--cCC-----------------------CCCCCeEEEecCCCCCCeEEEEEEEc
Q psy12725 1 MLALKFFTCKYEGNPVKTISWMKDGK--PVP-----------------------DHNEPVFRIDSVRKEDKGMYQCVIRN 55 (119)
Q Consensus 1 ~g~~~~l~c~~~~~~~~~v~w~~~~~--~~~-----------------------~~~~~~l~~~~~~~~d~g~y~C~~~~ 55 (119)
.|+.++|.|.+.+.+.+.+.|+|++. ... ......|.|.+++.+|.|.|.|.+.|
T Consensus 141 ~G~~v~L~C~~~~~p~~~i~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~n 220 (238)
T 2p1y_A 141 EGETAILNCSYENSAFDYFPWYQQFPGEGPALLISILSVSDKKEDGRFTIFFNKREKKLSLHIADSQPGDSATYFCAAID 220 (238)
T ss_dssp TTSCEEEEEECCCTTCCEEEEEEECTTSCCEEEEEEETTCSEEEETTEEEEEETTTTEEEEEETTCCGGGCEEEEEEEEE
T ss_pred CCCeEEEEEEEecCCCCcEEEEEECCCCCCEEEEEEccCCCcccCCceEEEecCCCCeEEEEEcCCCHHHCEEEEEEEee
Confidence 48999999999988889999999631 100 01124799999999999999999998
Q ss_pred C
Q psy12725 56 E 56 (119)
Q Consensus 56 ~ 56 (119)
.
T Consensus 221 ~ 221 (238)
T 2p1y_A 221 T 221 (238)
T ss_dssp T
T ss_pred C
Confidence 7
No 426
>2e27_L Anti-ciguatoxin antibody, light chain; immunoglobulin fold, immune system; HET: AB0; 1.70A {Mus musculus} PDB: 3iy1_A
Probab=99.00 E-value=1.1e-09 Score=56.30 Aligned_cols=56 Identities=23% Similarity=0.383 Sum_probs=42.9
Q ss_pred CCccEEEEEEeccCCCCeeEEeeCC--ccCC------------CC---------CCCeEEEecCCCCCCeEEEEEEEcC
Q psy12725 1 MLALKFFTCKYEGNPVKTISWMKDG--KPVP------------DH---------NEPVFRIDSVRKEDKGMYQCVIRNE 56 (119)
Q Consensus 1 ~g~~~~l~c~~~~~~~~~v~w~~~~--~~~~------------~~---------~~~~l~~~~~~~~d~g~y~C~~~~~ 56 (119)
.|+.|+|.|.+.+.+.+.+.|||.. .... .. ....|.|.+++.+|+|.|.|.+.+.
T Consensus 17 ~G~~vtL~C~~~~~~~~~v~W~r~~~g~~~~~l~~~~~~~~~~~~~R~~~~~~~~~~~L~I~~v~~~DsG~Y~C~~~~~ 95 (119)
T 2e27_L 17 LGGKVTITCKANQDIKKKIAWYQHKPGKGPRLLIYYTSTLKSGISSRFSGSGSGRDYSFSISNLEPEDAATYYCLQYDN 95 (119)
T ss_dssp TTCCEEEEEEESSCCTTCEEEEEECTTSCCEEEEETTTEECTTSCTTEEEEEETTEEEEEECSCCGGGCEEEEEEECGG
T ss_pred CCCCEEEEEEeCCCCCceEEEEEECCCCCCEEEEEECCccCCCCCCcEEEEccCCEEEEEECCCChHHCEEEEEEEccC
Confidence 4899999999988777889999843 1110 00 1236899999999999999999875
No 427
>2eys_A NKT15; natural killer T cell receptor, immune system; 2.21A {Homo sapiens} PDB: 2eyr_A 2eyt_A 3huj_E* 3tyf_A 3tzv_A* 3sdx_E* 2po6_C* 2cde_A 3to4_C*
Probab=99.00 E-value=7.8e-09 Score=58.18 Aligned_cols=99 Identities=13% Similarity=0.239 Sum_probs=61.2
Q ss_pred CCccEEEEEEeccCCCCeeEEeeCC--cc---C-C--C-----------------CCCCeEEEecCCCCCCeEEEEEEEc
Q psy12725 1 MLALKFFTCKYEGNPVKTISWMKDG--KP---V-P--D-----------------HNEPVFRIDSVRKEDKGMYQCVIRN 55 (119)
Q Consensus 1 ~g~~~~l~c~~~~~~~~~v~w~~~~--~~---~-~--~-----------------~~~~~l~~~~~~~~d~g~y~C~~~~ 55 (119)
.|+.|+|.|.+.+.....+.|||.. .. + . . .....|.|.+++.+|.|.|.|.+.+
T Consensus 17 ~G~svtL~C~~s~~~~~~v~Wyrq~~g~~~~~l~~~~~~~~~~~~~Rfs~~~~~~~~~~sL~I~~~~~~Dsg~Y~C~~~~ 96 (210)
T 2eys_A 17 EGKNCTLQCNYTVSPFSNLRWYKQDTGRGPVSLTIMTFSENTKSNGRYTATLDADTKQSSLHITASQLSDSASYICVVSD 96 (210)
T ss_dssp TTCCEEEEEEECCSSCCEEEEEEECTTSCCEEEEEEETTCSEEEETTEEEEEETTTTEEEEEESSCCGGGCEEEEEEEES
T ss_pred cCCCEEEEEEECCCCCCeEEEEEeCCCCCCEEEEEEecCCCCccCCCEEEEEcCCCCEEEEEEccCCcccCceEEEEEEc
Confidence 4899999999977666689999832 11 1 1 1 0124789999999999999999987
Q ss_pred CC---CC--ceeEeeEEEeeec--CCCeeeecCCccccCCCCcEEEEeEEccCCCC
Q psy12725 56 EQ---ES--AQASGELKLGGRF--DPPVIKESFSDETLNPGPNYYFKCIASGNPTP 104 (119)
Q Consensus 56 ~~---~~--~~~~~~~~v~~~~--~~~~~~~~~~~~~~~~g~~~~l~C~~~~~p~~ 104 (119)
.. .. ......+.|.... .+|.+...... ...++|.|.+.+.++.
T Consensus 97 ~~~~~~~~~fg~gt~L~V~~~~~~~~P~V~~~~~~-----~~~~tl~Cl~~gf~P~ 147 (210)
T 2eys_A 97 RGSTLGRLYFGRGTQLTVWPDIQNPDPAVYQLRDS-----KSSDKSVCLFTDFDSQ 147 (210)
T ss_dssp CSSTTCCEEECCCEEEEEECCCSSCCCEEEEECCC-----SSSSCEEEEEESCCTT
T ss_pred cCCCcccceECCCEEEEEECCCCCCCCeEEecCCC-----CCCceEEEEcccccCC
Confidence 42 11 1122345553321 23333332211 1278899999887444
No 428
>4esk_A LAIR-1, mlair1, leukocyte-associated immunoglobulin-like receptor; IG-like domain, domain swapping, collagen receptor, structural genomics; 1.76A {Mus musculus}
Probab=98.99 E-value=3.1e-09 Score=53.21 Aligned_cols=66 Identities=21% Similarity=0.291 Sum_probs=47.0
Q ss_pred CccEEEEEEeccCCC----CeeEEeeCCccCC------CCCCCeEEEecCCCCCCeEEEEEEEcCCCCceeEeeEEEe
Q psy12725 2 LALKFFTCKYEGNPV----KTISWMKDGKPVP------DHNEPVFRIDSVRKEDKGMYQCVIRNEQESAQASGELKLG 69 (119)
Q Consensus 2 g~~~~l~c~~~~~~~----~~v~w~~~~~~~~------~~~~~~l~~~~~~~~d~g~y~C~~~~~~~~~~~~~~~~v~ 69 (119)
|+.|+|.| ... .. ..+.|+|++.... ......+.|..++..|.|.|.|...+...-...+..+.+.
T Consensus 23 G~~VTL~C-~~~-~~~~~~~~f~l~k~g~~~~~~~~~~~~~~a~f~i~~vt~~~aG~Y~C~~~~~~~~S~~Sdpl~L~ 98 (102)
T 4esk_A 23 GTFVTVVC-SYS-DKHDLYNMVRLEKDGSTFMEKSTEPYKTEDEFEIGPVNETITGHYSCIYSKGITWSERSKTLELK 98 (102)
T ss_dssp TCCEEEEE-ECT-TTGGGCCEEEEEETTEEEEEEECCSSCSEEEEEECSCCGGGCEEEEEEEEETTTEEEECCCEEEE
T ss_pred CCcEEEEE-CCC-cCCCcccEEEEEECCccccccccCCCCcceEEEeCcCCcccCeeEEEEEeCCCccccCcCCEEEE
Confidence 88999999 643 33 5789999986532 2345678999999999999999988754323334444443
No 429
>2q20_A VK1 O18/O8 germline light chain variable domain; Al, light chain amyloidosis, amyloid, immunoglobulin, protein fibril; 1.30A {Homo sapiens} PDB: 2kqm_A 3cdf_A 3cdc_A 2kqn_A 3cdy_A 2q1e_A 3dvi_A 1igm_L 1bww_A 1b0w_A 1bre_A 1qp1_A 3dvf_A 1rei_A 1wtl_A 1ar2_A 1fgv_L 2bx5_A 2uzi_L* 1bvk_A ...
Probab=98.99 E-value=8e-10 Score=55.90 Aligned_cols=56 Identities=20% Similarity=0.339 Sum_probs=43.0
Q ss_pred CCccEEEEEEeccCCCCeeEEeeCC--cc---CC---------CC---------CCCeEEEecCCCCCCeEEEEEEEcC
Q psy12725 1 MLALKFFTCKYEGNPVKTISWMKDG--KP---VP---------DH---------NEPVFRIDSVRKEDKGMYQCVIRNE 56 (119)
Q Consensus 1 ~g~~~~l~c~~~~~~~~~v~w~~~~--~~---~~---------~~---------~~~~l~~~~~~~~d~g~y~C~~~~~ 56 (119)
.|+.|+|.|.+.+.+.+.+.||+.. .. +. .. ....|.|.+++.+|+|.|.|.+.+.
T Consensus 17 ~G~~v~L~C~~~~~~~~~v~W~r~~~~~~~~~l~~~~~~~~~~~~~R~~~~~~~~~~~L~I~~v~~~DsG~Y~C~~~~~ 95 (109)
T 2q20_A 17 VGDRVTITCQASQDISNYLNWYQQKPGKAPKLLIYDASNLETGVPSRFSGSGSGTDFTFTISSLQPEDIATYYCQQYDN 95 (109)
T ss_dssp TTCCEEEEEEESSCCTTCEEEEEECTTSCEEEEEETTTEECTTCCTTEEEEEETTEEEEEESSCCGGGCEEEEEEECSS
T ss_pred CCCcEEEEEeeccCCCCcEEEEEECCCCCCEEEEEEcCccCCCCCCcEEEeccCCEEEEEECCCChhhCEEEEEEEeeC
Confidence 4899999999987777889999853 11 10 00 1236899999999999999999864
No 430
>1f3r_B FV antibody fragment; IG-fold, immuno complex, antibody-antigen, beta-turn, immune system; HET: NLE; NMR {Rattus norvegicus} SCOP: b.1.1.1 b.1.1.1
Probab=98.99 E-value=4e-10 Score=64.98 Aligned_cols=57 Identities=21% Similarity=0.301 Sum_probs=45.0
Q ss_pred CCccEEEEEEeccCCCCeeEEee--CCccCCC---------------------CCCCeEEEecCCCCCCeEEEEEEEcCC
Q psy12725 1 MLALKFFTCKYEGNPVKTISWMK--DGKPVPD---------------------HNEPVFRIDSVRKEDKGMYQCVIRNEQ 57 (119)
Q Consensus 1 ~g~~~~l~c~~~~~~~~~v~w~~--~~~~~~~---------------------~~~~~l~~~~~~~~d~g~y~C~~~~~~ 57 (119)
.|+.++|.|.+.+.+.+.+.|+| ++..+.. .....|.|.+++.+|.|.|.|.+.|..
T Consensus 153 ~G~~v~L~C~~~~~~~~~v~W~k~~~g~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~n~~ 232 (257)
T 1f3r_B 153 VGDRVTLSCKGSQNINNYLAWYQQKLGEAPKLLIYNTNSLQTGIPSRFSGSGSGTDYTLTISSLQPEDVATYFCYQYNNG 232 (257)
T ss_dssp TTCCEEEEEECSSCCBTCEEEEEECTTSCCEEEEETTTEECTTCCTTEEEEEEBTEEEEEECSCCGGGCSEEEEEEESSS
T ss_pred CCCCEEEEEEECCcCCCcEEEEEECCCCCcEEEEEEccCCCCCcCCCEEEecCCCEEEEEECCCChhhCEEEEEEEeCCC
Confidence 38999999999988878999999 5543310 012368999999999999999999864
No 431
>3r0n_A Poliovirus receptor-related protein 2; IG-domain, cell-adhesion molecule, virus entry receptor, STR genomics, PSI-biology; 1.30A {Homo sapiens} PDB: 4dfh_A 4dfi_A
Probab=98.99 E-value=1.8e-09 Score=55.98 Aligned_cols=55 Identities=15% Similarity=0.382 Sum_probs=40.9
Q ss_pred CCccEEEEEEeccCCCC----eeEEeeCC----------------ccCCC------------C------------CCCeE
Q psy12725 1 MLALKFFTCKYEGNPVK----TISWMKDG----------------KPVPD------------H------------NEPVF 36 (119)
Q Consensus 1 ~g~~~~l~c~~~~~~~~----~v~w~~~~----------------~~~~~------------~------------~~~~l 36 (119)
+|+.|+|.|.+...+.+ .+.|++.. ..... . ...+|
T Consensus 16 ~G~~v~L~C~~~~~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~g~~~~~~~~~~sL 95 (128)
T 3r0n_A 16 LGGTVELPCHLLPPVPGLYISLVTWQRPDAPANHQNVAAFHPKMGPSFPSPKPGSERLSFVSAKQSTGQDTEAELQDATL 95 (128)
T ss_dssp TTSCEEECCEEESCCTTCEEEEEEEECTTSCGGGCEEEEEETTTEEECCSSSSCGGGEEESSCBCCCSTTCCCBCSBCCE
T ss_pred cCCCEEEEEEeecCCCCCcEEEEEEEEeCCCCCCeeEEEEecccCcccccccccCCcEEEeccccccccccccCCCCeEE
Confidence 48999999999876544 79999852 11111 0 03489
Q ss_pred EEecCCCCCCeEEEEEEEc
Q psy12725 37 RIDSVRKEDKGMYQCVIRN 55 (119)
Q Consensus 37 ~~~~~~~~d~g~y~C~~~~ 55 (119)
.|.+++.+|+|.|.|.+..
T Consensus 96 ~I~~v~~~D~G~Y~C~v~~ 114 (128)
T 3r0n_A 96 ALHGLTVEDEGNYTCEFAT 114 (128)
T ss_dssp EECSCCGGGCEEEEEEEEE
T ss_pred EEccCCchhCeEEEEEEEe
Confidence 9999999999999998765
No 432
>1i8k_A Epidermal growth factor receptor antibody MR1SCFV light chain; antibody-peptide complex, immunoglobulin fold, type II' beta turn., immune system; 1.80A {Mus musculus} SCOP: b.1.1.1 PDB: 1i8i_A
Probab=98.98 E-value=1.3e-09 Score=54.98 Aligned_cols=56 Identities=20% Similarity=0.334 Sum_probs=42.7
Q ss_pred CCccEEEEEEeccCCCCeeEEeeCC--ccCC------------CC---------CCCeEEEecCCCCCCeEEEEEEEcC
Q psy12725 1 MLALKFFTCKYEGNPVKTISWMKDG--KPVP------------DH---------NEPVFRIDSVRKEDKGMYQCVIRNE 56 (119)
Q Consensus 1 ~g~~~~l~c~~~~~~~~~v~w~~~~--~~~~------------~~---------~~~~l~~~~~~~~d~g~y~C~~~~~ 56 (119)
.|+.|+|.|.+.+.+.+.+.|||.. ..+. .. ....|.|.+++.+|+|.|.|.+.+.
T Consensus 15 ~G~~v~L~C~~~~~~~~~v~W~r~~~~~~~~~l~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~DsG~Y~C~~~~~ 93 (107)
T 1i8k_A 15 TGEKVTIRCMTSTDIDDDMNWYQQKPGEPPKFLISEGNTLRPGVPSRFSSSGTGTDFVFTIENTLSEDVGDYYCLQSFN 93 (107)
T ss_dssp TTCCEEEEEEESSCCTTCEEEEEECTTSCCEEEEETTTEECTTSCTTEEEEEETTEEEEEESSCCGGGCEEEEEEECSS
T ss_pred CCCCEEEEEEECCCCCCcEEEEEECCCCCCEEEEEecCccCCCCCCCEEEEccCCEEEEEECCCCHHHCEEEEEEEeeC
Confidence 4899999999987777789999853 2110 00 1236899999999999999999865
No 433
>1pew_A JTO2, A lambda-6 type immunoglobulin light chain, domain; beta sheet, immune system; 1.60A {Homo sapiens} SCOP: b.1.1.1 PDB: 1cd0_A 1pw3_A 2cd0_A 2w0k_A 3b5g_A 3bdx_A* 2w0l_A
Probab=98.98 E-value=1.3e-09 Score=55.16 Aligned_cols=56 Identities=18% Similarity=0.341 Sum_probs=41.2
Q ss_pred CCccEEEEEE-eccCC-CCeeEEeeCCccCC-----------------------CCCCCeEEEecCCCCCCeEEEEEEEc
Q psy12725 1 MLALKFFTCK-YEGNP-VKTISWMKDGKPVP-----------------------DHNEPVFRIDSVRKEDKGMYQCVIRN 55 (119)
Q Consensus 1 ~g~~~~l~c~-~~~~~-~~~v~w~~~~~~~~-----------------------~~~~~~l~~~~~~~~d~g~y~C~~~~ 55 (119)
.|+.|+|.|. +.+.+ ...+.|||...... ......|.|.+++.+|+|.|.|.+.+
T Consensus 14 ~G~~v~L~C~v~~~~~~~~~v~W~r~~~~~~~l~~~~~~~~~~~~~R~~~~~~~~~~~~~L~I~~v~~~DsG~Y~C~~~~ 93 (109)
T 1pew_A 14 PGKTVTISCTRSSGNIASNYVQWYQQRSAPITVIYEDNQRPSGVPDRFAGSIDRSSNSASLTISGLKTEDEADYYCQSYD 93 (109)
T ss_dssp TTSCEEEEEEESSSCGGGSCCEEEEC-CCCEEEEBTTTBCCTTCCTTEEEEEETTTTEEEEEECSCCGGGCEEEEEEEEE
T ss_pred CCCCEEEEEEeCCCCCCCccEEEEEECCCCcEEEEecCCcCCCCCCcEEEEeccCCCEEEEEECCCChhhCEEEEEEEEe
Confidence 4899999999 76554 46899998652110 00123689999999999999999987
Q ss_pred C
Q psy12725 56 E 56 (119)
Q Consensus 56 ~ 56 (119)
.
T Consensus 94 ~ 94 (109)
T 1pew_A 94 A 94 (109)
T ss_dssp T
T ss_pred C
Confidence 4
No 434
>4ety_A LAIR-1, mlair1, leukocyte-associated immunoglobulin-like receptor; IG-like domain, extra celluar domain, domain swappin nysgrc, structural genomics; 1.90A {Mus musculus}
Probab=98.98 E-value=3.4e-09 Score=54.36 Aligned_cols=67 Identities=21% Similarity=0.271 Sum_probs=46.3
Q ss_pred CccEEEEEEeccCCC----CeeEEeeCCccCC------CCCCCeEEEecCCCCCCeEEEEEEEcCCCCceeEeeEEEee
Q psy12725 2 LALKFFTCKYEGNPV----KTISWMKDGKPVP------DHNEPVFRIDSVRKEDKGMYQCVIRNEQESAQASGELKLGG 70 (119)
Q Consensus 2 g~~~~l~c~~~~~~~----~~v~w~~~~~~~~------~~~~~~l~~~~~~~~d~g~y~C~~~~~~~~~~~~~~~~v~~ 70 (119)
|+.|+|.| ... .. ..+.|||++.... ......+.|..++..|.|.|.|...+...-...+..+.+.+
T Consensus 23 G~~VTL~C-~~~-~~~~~~~~f~L~k~g~~~~~~~~~~~~~~a~f~i~~vt~~daG~Y~C~y~~~~~wS~~Sdpl~L~V 99 (118)
T 4ety_A 23 GTFVTVVC-SYS-DKHDLYNMVRLEKDGSTFMEKSTEPYKTEDEFEIGPVNETITGHYSCIYSKGITWSERSKTLELKV 99 (118)
T ss_dssp TCCEEEEE-ECT-TTGGGCCEEEEEETTEEEEEEECCSSSSEEEEEECSCCGGGCEEEEEEEEC----CEECCCEEEEE
T ss_pred CCcEEEEE-CCC-CCCcccCEEEEEECCcCccccccCCCCcceEEEeCccCccCCeEEEEEeeCCCccccccCCEEEEE
Confidence 88999999 643 33 5789999987542 23456789999999999999999876543333444555544
No 435
>2jju_A Signal regulatory protein beta-1; immunoglobulin domain, immunoglobulin superfamily, immune system, transmembrane, paired receptor; 1.19A {Homo sapiens} PDB: 2jjv_A 2uv3_A* 2jjt_A* 2jjs_A* 2jjw_A
Probab=98.98 E-value=3.9e-09 Score=54.79 Aligned_cols=56 Identities=20% Similarity=0.383 Sum_probs=42.9
Q ss_pred CCccEEEEEEeccC-CCCeeEEeeCCcc----CC-C------------------CCCCeEEEecCCCCCCeEEEEEEEcC
Q psy12725 1 MLALKFFTCKYEGN-PVKTISWMKDGKP----VP-D------------------HNEPVFRIDSVRKEDKGMYQCVIRNE 56 (119)
Q Consensus 1 ~g~~~~l~c~~~~~-~~~~v~w~~~~~~----~~-~------------------~~~~~l~~~~~~~~d~g~y~C~~~~~ 56 (119)
.|+.|+|.|.+.+. +.+.+.|||.... +. . .....|.|.+++.+|+|.|.|.+.+.
T Consensus 17 ~G~~vtL~C~~~~~~~~~~v~W~r~~~~~~~li~~~~~~~~~r~~~~~~~~~~~~~~~~L~I~~v~~~DsG~Y~C~~~~~ 96 (127)
T 2jju_A 17 AGESATLRCAMTSLIPVGPIMWFRGAGAGRELIYNQKEGHFPRVTTVSELTKRNNLDFSISISNITPADAGTYYCVKFRK 96 (127)
T ss_dssp TTSCEEECCEESCCCSCCCEEEEECSSTTCEEEEESSSSCCTTEEEC-------CCBCCEEECSCCGGGCEEEEEEEEEC
T ss_pred CCCCEEEEEEEeCCCCCCEEEEEecCCCCcEEEEECCCCccCcEEeeEeeeecCCCEEEEEECCCCHHHCEEEEEEEEcC
Confidence 48999999999765 5668999986521 10 0 11357999999999999999999875
No 436
>1nkr_A P58-CL42 KIR; inhibitory receptor, natural killer cells, immunological receptors, immunoglobulin fold; 1.70A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 PDB: 1m4k_A 1efx_D 2dli_A 2dl2_A 3h8n_A
Probab=98.97 E-value=1.5e-09 Score=60.39 Aligned_cols=53 Identities=11% Similarity=0.213 Sum_probs=42.7
Q ss_pred CCccEEEEEEeccCCCCeeEEeeCCccCCCC----------CCCeEEEecCCCCCCeEEEEEEEcC
Q psy12725 1 MLALKFFTCKYEGNPVKTISWMKDGKPVPDH----------NEPVFRIDSVRKEDKGMYQCVIRNE 56 (119)
Q Consensus 1 ~g~~~~l~c~~~~~~~~~v~w~~~~~~~~~~----------~~~~l~~~~~~~~d~g~y~C~~~~~ 56 (119)
.|+.++|.|.+.+ +.+.+.|+|++..+... ....|.|.+++ |.|.|.|.+.+.
T Consensus 121 ~G~~v~L~C~~~~-~~~~~~w~k~g~~~~~~~~~~~~~~~~~~~~L~i~~v~--d~G~Y~C~a~~~ 183 (201)
T 1nkr_A 121 AGENVTLSCSSRS-SYDMYHLSREGEAHERRLPAGPKVNGTFQADFPLGPAT--HGGTYRCFGSFH 183 (201)
T ss_dssp TTCEEEEEEEESS-CCSEEEEEETTCSSCEEEECEEEETTEEEEEEEEEECC--SCEEEEEEEEET
T ss_pred CCCeEEEEEeCCC-CCceEEEEECCcccCcccccccccCCceEEEEEeCCcC--CCeeEEEEEEcC
Confidence 4899999999986 56789999998766421 14578888888 999999999865
No 437
>2nw2_A ELS4 TCR alpha chain; T cell receptor, immune system; 1.40A {Homo sapiens} PDB: 2nx5_D 4dzb_A
Probab=98.97 E-value=8.2e-09 Score=57.66 Aligned_cols=99 Identities=10% Similarity=0.214 Sum_probs=58.2
Q ss_pred CCccEEEEEEeccCCCCeeEEeeCC--cc---C---C-------C---------CCCCeEEEecCCCCCCeEEEEEEEcC
Q psy12725 1 MLALKFFTCKYEGNPVKTISWMKDG--KP---V---P-------D---------HNEPVFRIDSVRKEDKGMYQCVIRNE 56 (119)
Q Consensus 1 ~g~~~~l~c~~~~~~~~~v~w~~~~--~~---~---~-------~---------~~~~~l~~~~~~~~d~g~y~C~~~~~ 56 (119)
.|+.|+|.|.+.+.....+.|||.. .. + . . .....|.|.+++.+|.|.|.|.+.+.
T Consensus 13 ~G~~vtL~C~~s~~~~~~v~Wyrq~~g~~~~~l~~~~~~~~~~~~Rf~~~~~~~~~~~~L~I~~~~~~Dsg~Y~C~~~~~ 92 (200)
T 2nw2_A 13 EGAIVQINCTYQTSGFNGLFWYQQHAGEAPTFLSYNVLDGLEEKGRFSSFLSRSKGYSYLLLKELQMKDSASYLCAVQAS 92 (200)
T ss_dssp TTCCEEEEEECCCSSCCCEEEEEECTTSCCEEEEEECSSEEEEETTEEEEEETTTTEEEEEECSCCGGGCEEEEEEEC--
T ss_pred cCCCEEEEEEECCCCCceEEEEEeCCCCCcEEEEEEcCCCcccCCceEEEecCCCCEEEEEECccCcccCCcEEEEEEcC
Confidence 4899999999876555679999732 11 1 0 0 11247899999999999999998652
Q ss_pred --CC--CceeEeeEEEeeec--CCCeeeecCCccccCCCCcEEEEeEEccCCCC
Q psy12725 57 --QE--SAQASGELKLGGRF--DPPVIKESFSDETLNPGPNYYFKCIASGNPTP 104 (119)
Q Consensus 57 --~~--~~~~~~~~~v~~~~--~~~~~~~~~~~~~~~~g~~~~l~C~~~~~p~~ 104 (119)
.. .......+.|.... ..|.+..... ....++|.|.+.+..+.
T Consensus 93 ~~~~~~~fg~gt~L~V~~~~~~~~P~V~~~~~-----~~~~~tl~Cl~~gf~P~ 141 (200)
T 2nw2_A 93 GGSYIPTFGRGTSLIVHPYIQNPDPAVYQLRD-----SKSSDKSVCLFTDFDSQ 141 (200)
T ss_dssp -CCCCCEECCCEEEEEECCCSSCCCEEEEEEE-----CC--CCEEEEEESCCTT
T ss_pred CcceeeeeCCCEEEEEecCcccCCCeEEEcCC-----CCCCceEEEEeecccCC
Confidence 11 11123345554321 2233332211 12278899999887543
No 438
>2yz1_A Tyrosine-protein phosphatase non-receptor type substrate 1; beta-sandwich, structural genomics, NPPSFA; 1.40A {Mus musculus}
Probab=98.97 E-value=2.6e-09 Score=54.85 Aligned_cols=57 Identities=25% Similarity=0.402 Sum_probs=43.2
Q ss_pred CCccEEEEEEeccC-CCCeeEEeeCCcc----CC---------C----------CCCCeEEEecCCCCCCeEEEEEEEcC
Q psy12725 1 MLALKFFTCKYEGN-PVKTISWMKDGKP----VP---------D----------HNEPVFRIDSVRKEDKGMYQCVIRNE 56 (119)
Q Consensus 1 ~g~~~~l~c~~~~~-~~~~v~w~~~~~~----~~---------~----------~~~~~l~~~~~~~~d~g~y~C~~~~~ 56 (119)
+|+.|+|.|.+.+. +.+.+.|||++.. +. . .....|.|.+++.+|+|.|.|.+.+.
T Consensus 21 ~G~~v~L~C~~~~~~~~~~v~W~r~~~~~~~~i~~~~~~~~~r~~~~~~~~~~~~~~~~L~I~~v~~~DsG~Y~C~~~~~ 100 (120)
T 2yz1_A 21 AGDSTVLNCTLTSLLPVGPIKWYRGVGQSRLLIYSFTGEHFPRVTNVSDATKRNNMDFSIRISNVTPEDAGTYYCVKFQK 100 (120)
T ss_dssp TTCCEEECCEESCCCSCCCEEEEESSSTTCEEEEEECEECTTTCCSEEECCBSSTTBCCEEECSCCGGGCEEEEEEEEEC
T ss_pred CCCCEEEEeEECCCCCCcEEEEEcCCCCCcEEEEEcCCcccCcccceeeccccCCCeEEEEECCCCHHHCEEEEEEEEcC
Confidence 48999999999765 5578999997521 10 0 11257999999999999999999875
Q ss_pred C
Q psy12725 57 Q 57 (119)
Q Consensus 57 ~ 57 (119)
.
T Consensus 101 ~ 101 (120)
T 2yz1_A 101 G 101 (120)
T ss_dssp C
T ss_pred C
Confidence 3
No 439
>3knb_B Obscurin-like protein 1; IG-like, titin, OBSL1, ATP-binding, calmodulin-BIN cardiomyopathy, disease mutation, immunoglobulin domain; 1.40A {Homo sapiens} PDB: 2wp3_O* 2wwm_C 2wwk_O
Probab=98.96 E-value=1e-09 Score=55.44 Aligned_cols=45 Identities=24% Similarity=0.538 Sum_probs=39.1
Q ss_pred CCeeeecCCccccCCCCcEEEEeEEccCCCCeEEEEECCEEcccC
Q psy12725 74 PPVIKESFSDETLNPGPNYYFKCIASGNPTPEISWYLDGKKLVNA 118 (119)
Q Consensus 74 ~~~~~~~~~~~~~~~g~~~~l~C~~~~~p~~~~~W~~~~~~~~~~ 118 (119)
+|.+...+.+..+.+|+.+.|.|.+.|.|.|.+.|++||..+..+
T Consensus 13 pP~f~~~p~~~~v~~G~~~~l~C~~~G~P~p~v~W~k~g~~l~~~ 57 (107)
T 3knb_B 13 PPCFLRFPRPVRVVSGAEAELKCVVLGEPPPVVVWEKGGQQLAAS 57 (107)
T ss_dssp EEEEEECCCCEEEETTSCEEEEEEEEEESCCEEEEEETTEECCCC
T ss_pred CCEEEeCCCcEEEeCCCcEEEEEEEEEecCCEEEEEECcccccce
Confidence 567777677777889999999999999999999999999988653
No 440
>2dru_A Chimera of CD48 antigen and T-cell surface antige; CD2 binding domain of CD48, immune system; HET: NAG; 2.60A {Rattus norvegicus}
Probab=98.96 E-value=9.2e-10 Score=60.46 Aligned_cols=55 Identities=11% Similarity=0.205 Sum_probs=42.2
Q ss_pred ccEEEEEEe-ccCCCCeeEEeeCCccCCCCCCCeEEEecCCCCCCeEEEEEEEcCCCCc
Q psy12725 3 ALKFFTCKY-EGNPVKTISWMKDGKPVPDHNEPVFRIDSVRKEDKGMYQCVIRNEQESA 60 (119)
Q Consensus 3 ~~~~l~c~~-~~~~~~~v~w~~~~~~~~~~~~~~l~~~~~~~~d~g~y~C~~~~~~~~~ 60 (119)
..+.|.|.+ .+ |.+.+.|++++..+.......+.+.. ..|.|.|+|.+.|..+..
T Consensus 116 ~~v~L~C~~~~g-p~p~i~W~~~~~~l~~~~~~~l~~~~--~~d~g~Y~C~a~N~~~~~ 171 (180)
T 2dru_A 116 SNATLTCEVLEG-TDVELKLYQGKEHLRSLRQKTMSYQW--TNLRAPFKCKAVNRVSQE 171 (180)
T ss_dssp GGTEEEEECSSC-TTCEEEEEETTEEEEEESSSEEEEEC--SCCSSCEEEEEEETTEEE
T ss_pred CCEEEEEEeCCC-CCCEEEEEECCeECcCCCCCEEEEEE--hhcCccEEEEEecCcCcc
Confidence 457899999 55 88999999999877533445666532 789999999999986543
No 441
>3esu_F Antibody 14B7* light chain and antibody 14B7* heavy chain linked with A synthetic...; single-chain FV, monoclonal antibody, immunoglobulin; 1.30A {Mus musculus} PDB: 3et9_F 3esv_F 3etb_F 1h8n_A 1h8s_A* 1h8o_A*
Probab=98.96 E-value=2e-09 Score=61.67 Aligned_cols=55 Identities=20% Similarity=0.342 Sum_probs=42.8
Q ss_pred CCccEEEEEEeccCC--CCeeEEeeC--CccCCC----------------------------CCCCeEEEecCCCCCCeE
Q psy12725 1 MLALKFFTCKYEGNP--VKTISWMKD--GKPVPD----------------------------HNEPVFRIDSVRKEDKGM 48 (119)
Q Consensus 1 ~g~~~~l~c~~~~~~--~~~v~w~~~--~~~~~~----------------------------~~~~~l~~~~~~~~d~g~ 48 (119)
.|+.++|.|.+.+.+ .+.+.|||+ +..+.. .....|.|.+++.+|.|.
T Consensus 145 ~G~~v~L~C~~~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~I~~v~~~DsG~ 224 (250)
T 3esu_F 145 PGASVKISCKDSGYAFSSSWMNWVKQRPGQGPEWIGRIYPGDGDTNYNGKFKGKATLTADKSSSTAYMQLSSLTSVDSAV 224 (250)
T ss_dssp TTCCEEEEEECCSTTGGGSEEEEEEECTTSCCEEEEEEETTTTEEEECGGGTTTEEEEEEGGGTEEEEEECSCCGGGCEE
T ss_pred CCceEEEEEEecCCcccCCEEEEEEECCCCCcEEEEEEeccCCccccCccccceEEEEecCCCCeEEEEECCCCcccCEE
Confidence 489999999998766 779999997 332210 111269999999999999
Q ss_pred EEEEEEc
Q psy12725 49 YQCVIRN 55 (119)
Q Consensus 49 y~C~~~~ 55 (119)
|.|.+.+
T Consensus 225 Y~C~~~~ 231 (250)
T 3esu_F 225 YFCARSG 231 (250)
T ss_dssp EEEEEEC
T ss_pred EEEEEec
Confidence 9999997
No 442
>3mj8_L Stimulatory hamster antibody HL4E10 FAB light CHA; hamster IGG, immune system; 2.94A {Cricetulus migratorius} PDB: 3mj9_L*
Probab=98.96 E-value=2.5e-10 Score=63.86 Aligned_cols=57 Identities=14% Similarity=0.432 Sum_probs=44.9
Q ss_pred CccEEEEEEeccC-CC-CeeEEeeCCccCCCC--------C------CCeEEEecCCCCCCeEEEEEEEcCCC
Q psy12725 2 LALKFFTCKYEGN-PV-KTISWMKDGKPVPDH--------N------EPVFRIDSVRKEDKGMYQCVIRNEQE 58 (119)
Q Consensus 2 g~~~~l~c~~~~~-~~-~~v~w~~~~~~~~~~--------~------~~~l~~~~~~~~d~g~y~C~~~~~~~ 58 (119)
|+.++|.|.+.+. |. +.+.|++++..+... . ...|.|..+..+|.|.|+|.+.|..+
T Consensus 129 g~~v~l~C~~~g~~p~~~~v~W~k~g~~l~~~~~~~~~~~~~~~~~~~s~L~i~~~~~~d~G~Y~C~a~n~~~ 201 (213)
T 3mj8_L 129 TNQATLVCMINGFYPADVAVTWEADGTPITQGVKTTQPSKSDSKYMATSYLTMTADAWKSRNTFICKVTHGGN 201 (213)
T ss_dssp TTEEEEEEEEEEEBSSCCEEEEEETTEEECTTEEECCCEEETTEEEEEEEEEEESHHHHSCSCEEEEEEETTE
T ss_pred CCcEEEEEEeeceeCCCeEEEEEcCCcccCCCcccCCcCccCCcEEEEEEEEEeHHHcCCCCEEEEEEEECCc
Confidence 8899999999875 33 489999999877431 1 13377888888899999999999863
No 443
>1nqb_A Single-chain antibody fragment; multivalent antibody, diabody, domain SWA immunoglobulin; 2.00A {Mus musculus} SCOP: b.1.1.1 b.1.1.1 PDB: 1lmk_A 1qnz_H
Probab=98.96 E-value=2.1e-09 Score=62.03 Aligned_cols=56 Identities=20% Similarity=0.412 Sum_probs=43.6
Q ss_pred CCccEEEEEEeccCCCC-----eeEEee--CCccCC-----------C----------CCCCeEEEecCCCCCCeEEEEE
Q psy12725 1 MLALKFFTCKYEGNPVK-----TISWMK--DGKPVP-----------D----------HNEPVFRIDSVRKEDKGMYQCV 52 (119)
Q Consensus 1 ~g~~~~l~c~~~~~~~~-----~v~w~~--~~~~~~-----------~----------~~~~~l~~~~~~~~d~g~y~C~ 52 (119)
.|+.++|.|.+.+.+.+ .+.|+| ++..+. . .....|.|.+++.+|.|.|+|.
T Consensus 135 ~G~~v~L~C~~~~~~~~~~~~~~v~W~k~~~g~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~DsG~Y~C~ 214 (256)
T 1nqb_A 135 LGDQASISCRSSQSIVHSNGNTYLEWYLQKPGQSPKLLIYKVSNRFSGVPDRFSGSGSGTDFTLKISRVEAEDLGVYYCF 214 (256)
T ss_dssp TTCCEEEEEEESSCCBCTTSCBCEEEEEECTTSCEEEEEETTTEECTTCCTTEEEEEETTEEEEEESSCCGGGCEEEEEE
T ss_pred cCCcEEEEeEecCcccccccceEEEEEEECCCCCcEEEEEEeCCCCCccCCcEEEEccCCEEEEEECCCChHHCEEEEEE
Confidence 48999999999887754 899999 554331 0 0123689999999999999999
Q ss_pred EEcC
Q psy12725 53 IRNE 56 (119)
Q Consensus 53 ~~~~ 56 (119)
+.+.
T Consensus 215 a~~~ 218 (256)
T 1nqb_A 215 QGSH 218 (256)
T ss_dssp ECSS
T ss_pred EccC
Confidence 9875
No 444
>2pet_A Lutheran blood group glycoprotein; immunoglobulin superfamily., cell adhesion; 1.70A {Homo sapiens} PDB: 2pf6_A
Probab=98.96 E-value=7.1e-10 Score=62.59 Aligned_cols=55 Identities=18% Similarity=0.477 Sum_probs=42.2
Q ss_pred CccE-EEEEEe-ccCCCCeeEEeeCCccCCCCC----C------------------CeEEEecCCCCCCeEEEEEEEcC
Q psy12725 2 LALK-FFTCKY-EGNPVKTISWMKDGKPVPDHN----E------------------PVFRIDSVRKEDKGMYQCVIRNE 56 (119)
Q Consensus 2 g~~~-~l~c~~-~~~~~~~v~w~~~~~~~~~~~----~------------------~~l~~~~~~~~d~g~y~C~~~~~ 56 (119)
|+.+ .|.|.+ .+.|.+.+.|++++..+.... . ..|.+......|.|.|+|.+.|.
T Consensus 133 g~~~~~l~C~~~~~~p~p~i~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~L~i~~~~~dd~g~Y~C~a~n~ 211 (231)
T 2pet_A 133 DSAQEIATCNSRNGNPAPKITWYRNGQRLEVPVEMNPEGYMTSRTVREASGLLSLTSTLYLRLRKDDRDASFHCAAHYS 211 (231)
T ss_dssp CSEEEEEEEEEEEEBSCCEEEEEETTEECCCCSSCCSSEEEEEEEEECTTSCEEEEEEEEEECCGGGGGCEEEEEEEEE
T ss_pred CCceEEEEEEeECcccCCEEEEEECCccCccccccccceeecceeEecCCCeEEEEEEEEEecchhhCCceEEEEEEcC
Confidence 6666 999999 888999999999998775433 0 34666544455699999999995
No 445
>2q87_A CMRF35-H antigen; all-beta, immunoglobulin, IG-superfamily, IG-V, NKP44-like, natural killer cell IG-like receptor, inhibitory receptor; 1.70A {Homo sapiens}
Probab=98.95 E-value=4.4e-09 Score=53.20 Aligned_cols=57 Identities=16% Similarity=0.289 Sum_probs=42.0
Q ss_pred CCccEEEEEEeccCC-CCeeEEeeCCc--cCC-----------C-----------CCCCeEEEecCCCCCCeEEEEEEEc
Q psy12725 1 MLALKFFTCKYEGNP-VKTISWMKDGK--PVP-----------D-----------HNEPVFRIDSVRKEDKGMYQCVIRN 55 (119)
Q Consensus 1 ~g~~~~l~c~~~~~~-~~~v~w~~~~~--~~~-----------~-----------~~~~~l~~~~~~~~d~g~y~C~~~~ 55 (119)
.|+.|+|.|.+.... ...+.|||... ... . .....|.|.+++.+|+|.|.|.+.+
T Consensus 10 ~G~~v~L~C~~~~~~~~~~v~W~r~~~~~~~~~l~~~~~~~~~~~~R~~~~~~~~~~~~~L~I~~~~~~DsG~Y~C~~~~ 89 (110)
T 2q87_A 10 VGGSLSVQCPYEKEHRTLNKYWCRPPQIFLCDKIVETKGSAGKRNGRVSIRDSPANLSFTVTLENLTEEDAGTYWCGVDT 89 (110)
T ss_dssp TTSCEEEEEECCGGGTTSEEEEESCCSSSSCCCSEESSSTTCSEETTEEEEEEGGGTEEEEEESSCCGGGCEEEEEEEEC
T ss_pred CCCcEEEEeEecCCcCCceEEEEecCCCCCCeEEEEeCCccccccCCEEEEEcCcCCEEEEEEccCCHHHCEEEEEEEec
Confidence 489999999987643 46899998531 110 0 0124789999999999999999988
Q ss_pred CC
Q psy12725 56 EQ 57 (119)
Q Consensus 56 ~~ 57 (119)
..
T Consensus 90 ~~ 91 (110)
T 2q87_A 90 PW 91 (110)
T ss_dssp TT
T ss_pred Cc
Confidence 74
No 446
>2c1o_A IGK-C protein; FAB fragment, enantioselective, finrozole, immune system, antibody, ENA11His antibody, immunoglobulin domain; 2.75A {Mus musculus}
Probab=98.95 E-value=9.1e-10 Score=63.20 Aligned_cols=59 Identities=14% Similarity=0.290 Sum_probs=45.6
Q ss_pred CccEEEEEEeccC-CC-CeeEEeeCCccCCCC----------C------CCeEEEecCCCCCCeEEEEEEEcCCCCc
Q psy12725 2 LALKFFTCKYEGN-PV-KTISWMKDGKPVPDH----------N------EPVFRIDSVRKEDKGMYQCVIRNEQESA 60 (119)
Q Consensus 2 g~~~~l~c~~~~~-~~-~~v~w~~~~~~~~~~----------~------~~~l~~~~~~~~d~g~y~C~~~~~~~~~ 60 (119)
|+.+.|.|.+.+. |. ..+.|++++..+... . ...|.|..+..+|.|.|+|.+.|.....
T Consensus 169 g~~v~l~C~~~g~~p~~~~v~W~k~g~~l~~~~~~~~~~~~~~~g~~~~~~~L~i~~~~~~d~G~Y~C~a~n~~~~~ 245 (254)
T 2c1o_A 169 SGGASVVCFLNNFYPKDINVKWKIDGSERQNGVLNSWTDQDSKDSTYSMSSTLTLTKDEYERHNSYTCEATHKTSTS 245 (254)
T ss_dssp TTEEEEEEEEEEEBSSCCEEEEEESSSEECTTEEEEECCCCTTTCCEEEEEEEEEEHHHHHTCCEEEEEEECTTCSS
T ss_pred CCcEEEEEEEecccCCCcEEEEEECCCcccCcceeccccccCCCCcEEEEEEEEeccccccCCCeEEEEEEcCCCCC
Confidence 6789999999874 43 469999998766432 1 1358888888999999999999986543
No 447
>1nfd_E H57 FAB; complex (immunoreceptor-immunoglobulin), complex (immunorece immunoglobulin) complex; HET: NAG NDG; 2.80A {Mus musculus} SCOP: b.1.1.1 b.1.1.2
Probab=98.95 E-value=1.3e-10 Score=64.95 Aligned_cols=58 Identities=16% Similarity=0.342 Sum_probs=45.1
Q ss_pred CccEEEEEEeccC-CC-CeeEEeeCCccCCCCC--------------CCeEEEecCCCCCCeEEEEEEEcCCCC
Q psy12725 2 LALKFFTCKYEGN-PV-KTISWMKDGKPVPDHN--------------EPVFRIDSVRKEDKGMYQCVIRNEQES 59 (119)
Q Consensus 2 g~~~~l~c~~~~~-~~-~~v~w~~~~~~~~~~~--------------~~~l~~~~~~~~d~g~y~C~~~~~~~~ 59 (119)
|+.+.|.|.+.+. |. +.+.|++++..+.... ...|.|..+..+|.|.|+|.+.|....
T Consensus 128 g~~v~L~C~~~g~~p~~~~v~W~k~g~~~~~~~~~~~~~~~~~~~~~~s~L~i~~~~~~d~G~Y~C~a~n~~~~ 201 (212)
T 1nfd_E 128 TNKATLVCLVNDFYPGSATVTWKANGATINDGVKTTKPSKQGQNYMTSSYLSLTADQWKSHNRVSCQVTHEGET 201 (212)
T ss_dssp TTEECCCEEEEEEBSSCCEEEEEETTEEECSSCBCCCCBCSSSCEEEEEBCCEEHHHHHTCSCEEEEEECTTTT
T ss_pred CCceEEEEEEEeeECCccEEEEEECCeEcCCCeecCCceecCCCceEEEEEEEchhhcCCCCeEEEEEEeCCce
Confidence 7789999999876 54 7999999987764321 123677788889999999999998654
No 448
>3sob_L Antibody light chain; beta propeller, protein binding-immune system complex; 1.90A {Homo sapiens} PDB: 1pkq_A 3u1s_L*
Probab=98.95 E-value=1.6e-09 Score=61.36 Aligned_cols=59 Identities=14% Similarity=0.332 Sum_probs=45.1
Q ss_pred CccEEEEEEeccC-C-CCeeEEeeCCccCCCC----------CC------CeEEEecCCCCCCeEEEEEEEcCCCCc
Q psy12725 2 LALKFFTCKYEGN-P-VKTISWMKDGKPVPDH----------NE------PVFRIDSVRKEDKGMYQCVIRNEQESA 60 (119)
Q Consensus 2 g~~~~l~c~~~~~-~-~~~v~w~~~~~~~~~~----------~~------~~l~~~~~~~~d~g~y~C~~~~~~~~~ 60 (119)
|+.+.|.|.+.+. | .+.+.|++++..+... .. ..|.+.....+|.|.|+|.+.|.....
T Consensus 150 g~~v~l~C~~~~~~p~~~~v~W~k~g~~~~~~~~~~~~~~~~~~g~~~~~s~L~i~~~~~~d~g~Y~C~a~n~~~~~ 226 (237)
T 3sob_L 150 SGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSS 226 (237)
T ss_dssp HTEEEEEEEEEEEBSSCCEEEEEETTEECCSSEEEEECCCCTTTCCEEEEEEEEEEHHHHTTCCEEEEEEECTTCSS
T ss_pred CCceEEEEEEcccCCCceEEEEEECCCCCCCceeecccccccCCCcEEEEEEEEEcHHHccCCCcEEEEEeeCCCCC
Confidence 5779999999874 5 5799999998876431 11 346677778889999999999986444
No 449
>3knb_A Titin; IG-like, titin, OBSL1, ATP-binding, calmodulin-BIN cardiomyopathy, disease mutation, immunoglobulin domain; 1.40A {Homo sapiens} PDB: 3q5o_A 2wp3_T* 2wwk_T 2wwm_D 2y9r_T*
Probab=98.95 E-value=7.5e-10 Score=55.23 Aligned_cols=44 Identities=34% Similarity=0.705 Sum_probs=37.9
Q ss_pred CCeeeecCCccccCCCCcEEEEeEEccCCCCeEEEEECCEEccc
Q psy12725 74 PPVIKESFSDETLNPGPNYYFKCIASGNPTPEISWYLDGKKLVN 117 (119)
Q Consensus 74 ~~~~~~~~~~~~~~~g~~~~l~C~~~~~p~~~~~W~~~~~~~~~ 117 (119)
||.+...+.+..+.+|+.+.|.|.+.|.|.|.+.|+++|..+..
T Consensus 5 PP~i~~~p~~~~v~~G~~~~l~C~~~g~P~p~v~W~k~g~~i~~ 48 (100)
T 3knb_A 5 PPKIEALPSDISIDEGKVLTVACAFTGEPTPEVTWSCGGRKIHS 48 (100)
T ss_dssp EEEECCCCSEEEEETTSEEEEEEEEEEESCCEEEEEETTEECCT
T ss_pred CCEEEeCCCcEEEeCCCeEEEEEEEEEecCCEEEEEECceEeee
Confidence 56666666667788999999999999999999999999998864
No 450
>3umt_A SCFV heavy chain and light chain; stability engineering, anthrax, anti-BCLA antibody, immunoglobulin fold (VH and VL domains), antibody, immune S; HET: NHE; 1.80A {Mus musculus} PDB: 1xiw_D
Probab=98.94 E-value=2.3e-09 Score=61.68 Aligned_cols=57 Identities=16% Similarity=0.298 Sum_probs=43.8
Q ss_pred CCccEEEEEEeccCCCCeeEEeeCC--ccCC--------------C-------CCCCeEEEecCCCCCCeEEEEEEEcCC
Q psy12725 1 MLALKFFTCKYEGNPVKTISWMKDG--KPVP--------------D-------HNEPVFRIDSVRKEDKGMYQCVIRNEQ 57 (119)
Q Consensus 1 ~g~~~~l~c~~~~~~~~~v~w~~~~--~~~~--------------~-------~~~~~l~~~~~~~~d~g~y~C~~~~~~ 57 (119)
.|+.++|.|.+.+.+.+.+.|||.. ..+. . .....|.|.+++.+|.|.|+|.+.+..
T Consensus 152 ~G~~v~L~C~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~D~G~Y~C~~~~~~ 231 (256)
T 3umt_A 152 LGERVSITCRASQDIGSNLNWLQQKPDGTIKRLIYATSSLDSGVPKRFSGSRSGSDYSLTISSLESEDFVDYYCLQYASS 231 (256)
T ss_dssp TTCCEEEEEEESSCCTTCEEEEEECTTCCEEEEEETTTEECTTSCTTEEEEEETTEEEEEECSCCGGGCSEEEEEECSSS
T ss_pred CCCCEEEEEEEecCCCcEEEEEEECCCCCcEEEEEeccccCCccCCCEEEecCCCEEEEEECCCChhHCEEEEEEEeeCC
Confidence 4899999999998888899999842 2111 0 012359999999999999999998753
No 451
>2j6e_L IGM, FAB light chain; autoimmune complex human IGM rheumatoid factor IGG1-FC, immunoglobulin C region, membrane, glycoprotein, transmembrane; HET: NAG FUL BMA MAN NDG GAL; 3.0A {Homo sapiens} SCOP: b.1.1.1 b.1.1.2
Probab=98.93 E-value=1.3e-09 Score=61.79 Aligned_cols=58 Identities=19% Similarity=0.408 Sum_probs=44.3
Q ss_pred CccEEEEEEeccC-CC-CeeEEeeCCccCCCC---------C------CCeEEEecCCCCCCeEEEEEEEcCCCC
Q psy12725 2 LALKFFTCKYEGN-PV-KTISWMKDGKPVPDH---------N------EPVFRIDSVRKEDKGMYQCVIRNEQES 59 (119)
Q Consensus 2 g~~~~l~c~~~~~-~~-~~v~w~~~~~~~~~~---------~------~~~l~~~~~~~~d~g~y~C~~~~~~~~ 59 (119)
|+.++|.|.+.+. |. +.+.|++++..+... . ...|.|..+..+|.|.|+|.+.|....
T Consensus 150 g~~v~L~C~~~g~~p~~~~v~W~k~g~~l~~~~~~~~~~~~~~~~~~~~s~L~i~~~~~~d~G~Y~C~a~n~~~~ 224 (234)
T 2j6e_L 150 ANKATLVCLISDFFPGAVTVAWKADGAPVKAGVETTKPSKQSNNKYAASSYLSLTPEQWKSHRSYSCQVTHEGST 224 (234)
T ss_dssp TSCCCEEECCCBCSSCCCEEEEEETTEECCSSEEECCCCCCTTSCCBCCEEECCCGGGTTTSCCEEEEEEBTTBC
T ss_pred CCceEEEEEEEEEcCCceEEEEEECCEECCCCccccCceECCCCCEEEEEEEEECHHHcCCCCeEEEEEEeCCCc
Confidence 6789999999875 43 489999998876321 1 134777778889999999999998644
No 452
>4ffy_L DENV1-E111 single chain variable fragment (light; viral envelope proteins, structural genomics, antibody epito flavivirus, niaid; 2.50A {Mus musculus}
Probab=98.93 E-value=4e-09 Score=54.72 Aligned_cols=57 Identities=23% Similarity=0.407 Sum_probs=42.5
Q ss_pred CCccEEEEEEeccCC----CCeeEEeeCC--ccCC------------C---------CCCCeEEEecCCCCCCeEEEEEE
Q psy12725 1 MLALKFFTCKYEGNP----VKTISWMKDG--KPVP------------D---------HNEPVFRIDSVRKEDKGMYQCVI 53 (119)
Q Consensus 1 ~g~~~~l~c~~~~~~----~~~v~w~~~~--~~~~------------~---------~~~~~l~~~~~~~~d~g~y~C~~ 53 (119)
.|+.|+|.|.+.+.+ ...+.|||.. .... . .....|.|.+++.+|+|.|.|.+
T Consensus 15 ~G~~v~L~C~~~~~~~~~~~~~v~W~r~~~~~~~~~l~~~~~~~~~~~~~r~~~~~~~~~~sL~I~~v~~~DsG~Y~C~~ 94 (126)
T 4ffy_L 15 LGQRATISCRASESVDHYGNSFIYWYQQKPGQPPKLLIYLASNLESGVPARFSGSGSETDFTLTIDSVETDDAATYYCQQ 94 (126)
T ss_dssp TTSCEEEEEEESSCCEETTEECEEEEEECTTSCCEEEEETTTEECTTSCTTEEEEEETTEEEEEESSCCGGGCEEEEEEE
T ss_pred CCCCEEEEEecCCCcccCCCceEEEEEECCCCCCEEEEEEcCccCCCCCCcEEEecCCCEEEEEECCCCHHHCEEEEEEE
Confidence 489999999998765 5679999842 1110 0 12246999999999999999999
Q ss_pred EcCC
Q psy12725 54 RNEQ 57 (119)
Q Consensus 54 ~~~~ 57 (119)
.+..
T Consensus 95 ~~~~ 98 (126)
T 4ffy_L 95 NNED 98 (126)
T ss_dssp CSSS
T ss_pred ecCC
Confidence 8753
No 453
>4f9l_D 20.1 anti-BTN3A1 antibody fragment; B7 superfamily, butyrophilin, CD277, immune system; HET: NAG; 3.14A {Mus musculus}
Probab=98.93 E-value=1.1e-08 Score=58.53 Aligned_cols=111 Identities=19% Similarity=0.236 Sum_probs=65.2
Q ss_pred CCccEEEEEEeccCCCCeeEEee--CCccCC----C--------C---------CCCeEEEecCCCCCCeEEEEEEEcCC
Q psy12725 1 MLALKFFTCKYEGNPVKTISWMK--DGKPVP----D--------H---------NEPVFRIDSVRKEDKGMYQCVIRNEQ 57 (119)
Q Consensus 1 ~g~~~~l~c~~~~~~~~~v~w~~--~~~~~~----~--------~---------~~~~l~~~~~~~~d~g~y~C~~~~~~ 57 (119)
+|+.|+|.|.....-...+.||+ .++... . . ...+|.|..++.+|++.|+|...+..
T Consensus 15 ~G~~vtisC~~S~~i~~y~~WyqQ~pG~~P~lLiy~~s~~~sGvp~RFSgS~Sgt~ftLtIs~lq~eD~A~YyC~~~~~~ 94 (259)
T 4f9l_D 15 LGDTITITCHASQNINLWLSWYQQRPGNIPKLLIYRASNLHTGVPSRFSGSGSATGFTLTISSLQPEDIATYYCQQGHSY 94 (259)
T ss_dssp TTCEEEEEEEESSCCTTCEEEEEECTTSCEEEEEETTTEECTTCCTTEEEEEETTEEEEEEESCCGGGCEEEEEEECSSS
T ss_pred CCCCEEEEEEcCCCCCCCEEEEEECCCCCCEEEEECCCccCCCCCCCEEeeccCCeEEEEEcccChhhCEEEEEeecCCC
Confidence 48999999987544444688996 332210 0 0 12369999999999999999865432
Q ss_pred C-CceeEeeEEEeeecCCCe-------------------eeecCCccccCCCCcEEEEeEEccCC--CCeEEEEEC
Q psy12725 58 E-SAQASGELKLGGRFDPPV-------------------IKESFSDETLNPGPNYYFKCIASGNP--TPEISWYLD 111 (119)
Q Consensus 58 ~-~~~~~~~~~v~~~~~~~~-------------------~~~~~~~~~~~~g~~~~l~C~~~~~p--~~~~~W~~~ 111 (119)
. ......++.+......|. .+..+....+.+|.++.|.|.+.|.. ...+.|.+.
T Consensus 95 ~~tFG~GTkLeikr~~aa~~~s~~~~s~~a~ssGv~sqvqL~eSG~~lvkPG~Sl~LSC~aSG~tfs~y~~~WvRQ 170 (259)
T 4f9l_D 95 PYTFGGGTKLDIKRADAGGGGSGGGGSGGGGSGGGGSQVQLQESGAELVKPGASVKLSCKASGYTFTRYYLYWVKQ 170 (259)
T ss_dssp SCCBCCCCEECBCCC----------------------CCCEEEECCCEEESSSCEEEEEEEESSCGGGSCEEEEEE
T ss_pred CCCccCCeEEEEeccccCccccccccccccccCCccccceEEeECCCEECCCCcEEEEEeeeCCCcccCcEEEEEE
Confidence 1 111122222211000111 11123344578899999999998764 336888763
No 454
>1sq2_N Novel antigen receptor; immunoglobulin fold, protein-protein complex, hydrolase/immune system complex; 1.45A {Ginglymostoma cirratum} SCOP: b.1.1.1 PDB: 1t6v_N
Probab=98.92 E-value=8.1e-09 Score=52.56 Aligned_cols=55 Identities=16% Similarity=0.340 Sum_probs=41.6
Q ss_pred CCccEEEEEEeccCC--CCeeEEeeCC--ccC----C-----------CCCCCeEEEecCCCCCCeEEEEEEEc
Q psy12725 1 MLALKFFTCKYEGNP--VKTISWMKDG--KPV----P-----------DHNEPVFRIDSVRKEDKGMYQCVIRN 55 (119)
Q Consensus 1 ~g~~~~l~c~~~~~~--~~~v~w~~~~--~~~----~-----------~~~~~~l~~~~~~~~d~g~y~C~~~~ 55 (119)
.|+.|+|.|.+.+.+ .+.+.|||.. ... . ......|.|.+++.+|+|.|.|.+.+
T Consensus 14 ~G~~v~L~C~~~~~~~~~~~v~W~r~~~g~~~~~~~~~~~r~~~~~~~~~~~~~L~I~~~~~~DsG~Y~C~~~~ 87 (113)
T 1sq2_N 14 TGESLTINCVLRDASYALGSTCWYRKKSGEGNEESISKGGRYVETVNSGSKSFSLRINDLTVEDGGTYRCGLGV 87 (113)
T ss_dssp TTCCEEEEEEECSCSSCCCCEEEEEEETTSCCCEECCCBTTEEEEEETTTTEEEEEECSCCGGGCEEEEEEECB
T ss_pred cCCCEEEEEEECCCcCCCCEEEEEEeCCCCCceEeEEeCCCEEEEEeCCCCEEEEEECCCChhhCEEEEEEEEe
Confidence 489999999997654 5689999852 211 0 01234799999999999999999987
No 455
>1ccz_A Protein (CD58); LFA-3, glycoprotein; HET: NAG; 1.80A {Homo sapiens} SCOP: b.1.1.1 b.1.1.3 PDB: 1ci5_A 1qa9_B
Probab=98.92 E-value=2.4e-09 Score=58.30 Aligned_cols=54 Identities=7% Similarity=0.152 Sum_probs=41.8
Q ss_pred EEEEEeccCCCCeeEEeeCCccCCCCCCCeEEEecCCCCCCeEEEEEEEcCCCCce
Q psy12725 6 FFTCKYEGNPVKTISWMKDGKPVPDHNEPVFRIDSVRKEDKGMYQCVIRNEQESAQ 61 (119)
Q Consensus 6 ~l~c~~~~~~~~~v~w~~~~~~~~~~~~~~l~~~~~~~~d~g~y~C~~~~~~~~~~ 61 (119)
.|.|.+.+.|.+.+.|++++..+.......+.+. ...|.|.|+|.+.|..+...
T Consensus 109 ~L~C~~~~~p~p~i~W~~~~~~l~~~~~~~l~~~--~~~~~g~Y~C~a~N~~~~~~ 162 (171)
T 1ccz_A 109 TLTCEVLEGTDVELKLYQGKEHLRSLRQKTMSYQ--WTNLRAPFKCKAVNRVSQES 162 (171)
T ss_dssp EEEEECSSCSSCEEEEEETTEEEEEESSSEEEEE--CSCCSSCEEEEEEETTEEEE
T ss_pred EEEEEeCCCCCcEEEEEECCEECcCCcceEEEEe--ccCCCceEEEEEEcccCccc
Confidence 6899999888899999999988754444455543 36788999999999875443
No 456
>3uzq_A Anti-dengue MAB 4E11; dengue antibody neutralization, immune system; HET: MES; 1.60A {Mus musculus} PDB: 3uze_A* 3uyp_A* 3uzv_B 1dzb_A
Probab=98.92 E-value=2.1e-09 Score=61.74 Aligned_cols=69 Identities=17% Similarity=0.328 Sum_probs=48.0
Q ss_pred CCccEEEEEEeccCCCC----eeEEeeCC--ccCC--------------C-------CCCCeEEEecCCCCCCeEEEEEE
Q psy12725 1 MLALKFFTCKYEGNPVK----TISWMKDG--KPVP--------------D-------HNEPVFRIDSVRKEDKGMYQCVI 53 (119)
Q Consensus 1 ~g~~~~l~c~~~~~~~~----~v~w~~~~--~~~~--------------~-------~~~~~l~~~~~~~~d~g~y~C~~ 53 (119)
.|+.|+|.|.+.+.+.+ .+.|||+. ..+. . .....|.|.+++.+|+|.|.|.+
T Consensus 147 ~G~~v~L~C~~~~~~~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~DsG~Y~C~~ 226 (253)
T 3uzq_A 147 LGQRATISCRASENVDRYGNSFMHWYQQKAGQPPKLLIYRASNLESGIPARFSGSGSRTDFTLTINPVEADDVATYFCQR 226 (253)
T ss_dssp TTSCEEEEEEESSCCEETTEECEEEEEECTTSCCEEEEETTTEECTTCCTTEEEEEETTEEEEEESSCCGGGCEEEEEEE
T ss_pred CCCCEEEEEEecCccccCCCcEEEEEEECCCCCCEEEEEEccccCCccCCceEEeCCCCEEEEEECCCCHHHCEEEEEEE
Confidence 48999999999987765 89999842 2211 0 01235999999999999999999
Q ss_pred EcCCCC-ceeEeeEEEe
Q psy12725 54 RNEQES-AQASGELKLG 69 (119)
Q Consensus 54 ~~~~~~-~~~~~~~~v~ 69 (119)
.+.... ......+.|.
T Consensus 227 ~n~~~~~fg~gt~l~v~ 243 (253)
T 3uzq_A 227 SNEVPWTFGGGTKLEIK 243 (253)
T ss_dssp CSSSSCCBCCCEEEEEC
T ss_pred ccCCCcEECCCEEEEEc
Confidence 886432 2233445543
No 457
>1qok_A MFE-23 recombinant antibody fragment; immunoglobulin, single-chain FV, anti-carcinoembryonic antigen; 2.4A {Mus musculus} SCOP: b.1.1.1 b.1.1.1
Probab=98.92 E-value=3.4e-09 Score=61.91 Aligned_cols=55 Identities=18% Similarity=0.301 Sum_probs=43.7
Q ss_pred CCccEEEEEEeccCCCCeeEEee--CCccCC------------C---------CCCCeEEEecCCCCCCeEEEEEEEcC
Q psy12725 1 MLALKFFTCKYEGNPVKTISWMK--DGKPVP------------D---------HNEPVFRIDSVRKEDKGMYQCVIRNE 56 (119)
Q Consensus 1 ~g~~~~l~c~~~~~~~~~v~w~~--~~~~~~------------~---------~~~~~l~~~~~~~~d~g~y~C~~~~~ 56 (119)
.|+.++|.|.+.+.+ +.+.||| ++..+. . .....|.|.+++.+|.|.|+|.+.+.
T Consensus 176 ~G~~v~L~C~~~~~~-~~v~W~k~~~g~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~DsG~Y~C~a~~~ 253 (282)
T 1qok_A 176 PGEKVTITCSASSSV-SYMHWFQQKPGTSPKLWIYSTSNLASGVPARFSGSGSGTSYSLTISRMEAEDAATYYCQQRSS 253 (282)
T ss_dssp TTCCEEEEEEESSCC-SCCEEEEECTTSCCEEEEETTTEECTTCCTTEEEEEETTEEEEEESSCCGGGCEEEEEEECSS
T ss_pred CCCcEEEEEEecCCC-ceEEEEEECCCCCcEEEEEEecCCCCcccCCeEEecCCCEEEEEEccCChhHCEEEEEEEeeC
Confidence 389999999999888 8999999 554331 0 01236899999999999999999875
No 458
>2coq_A NEW antigen receptor variable domain; IG VNAR, natural TYPE2, immune system; 2.10A {Orectolobus maculatus}
Probab=98.92 E-value=2.7e-09 Score=53.86 Aligned_cols=55 Identities=18% Similarity=0.424 Sum_probs=41.5
Q ss_pred CCccEEEEEEeccCC--CCeeEEeeCC--cc----CC-----------CCCCCeEEEecCCCCCCeEEEEEEEc
Q psy12725 1 MLALKFFTCKYEGNP--VKTISWMKDG--KP----VP-----------DHNEPVFRIDSVRKEDKGMYQCVIRN 55 (119)
Q Consensus 1 ~g~~~~l~c~~~~~~--~~~v~w~~~~--~~----~~-----------~~~~~~l~~~~~~~~d~g~y~C~~~~ 55 (119)
.|+.|+|.|.+.+.. .+.+.|||.. .. +. ......|.|.+++.+|+|.|.|.+.+
T Consensus 14 ~G~~v~L~C~~~~~~~~~~~v~W~r~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~I~~~~~~DsG~Y~C~~~~ 87 (108)
T 2coq_A 14 TGESLTINCVLRDTACALDSTNWYRTKLGSTKEQTISIGGRYSETVDEGSNSASLTIRDLRVEDSGTYKCKAYR 87 (108)
T ss_dssp TTCCEEEEEEECCSSEEEEEEEEEEEETTCCCEEECCCBTTEEEEEETTTTEEEEEECSCCGGGCEEEEEEEEE
T ss_pred CCCCEEEEeEeCCCcCCCCEEEEEEcCCCCCcEEEEEeCCceEEEEcCCCCEEEEEECCCCcccCEEEEEEEEe
Confidence 489999999997653 5689999853 21 10 01235799999999999999999986
No 459
>2d9q_B Granulocyte colony-stimulating factor receptor; cytokine, ligand-receptor complex, signaling protein-cytokin; HET: NAG; 2.80A {Homo sapiens} SCOP: b.1.1.3 b.1.2.1 b.1.2.1
Probab=98.92 E-value=2.3e-08 Score=59.24 Aligned_cols=55 Identities=11% Similarity=0.166 Sum_probs=44.7
Q ss_pred CCccEEEEEEeccC-----CCCeeEEeeCCccCCCC------CC---CeEEEecCCCCCCeEEEEEEEc
Q psy12725 1 MLALKFFTCKYEGN-----PVKTISWMKDGKPVPDH------NE---PVFRIDSVRKEDKGMYQCVIRN 55 (119)
Q Consensus 1 ~g~~~~l~c~~~~~-----~~~~v~w~~~~~~~~~~------~~---~~l~~~~~~~~d~g~y~C~~~~ 55 (119)
+|+.++|.|.+.+. +.+.+.|++++..+... .+ ..|.|.++...|.|.|.|.+.+
T Consensus 14 ~G~~v~l~C~~~~~~~~~~~~~~i~W~~~g~~l~~~~~~~~~~~~~~~~L~i~~~~~~d~g~y~c~~~~ 82 (313)
T 2d9q_B 14 LGDPITASCIIKQNCSHLDPEPQILWRLGAELQPGGRQQRLSDGTQESIITLPHLNHTQAFLSCSLNWG 82 (313)
T ss_dssp TTCCEEEEECCCTTSCSSCSCSCCEEESSSCBCTTCEECCCSSSCCCEEEEESCCCSSEEEEEEEEESS
T ss_pred CCCCEEEEEEECCCCCCCCcccceEEEeCCEECCccceEEEecCeEEEEEEEeccCCCccceEEeeecC
Confidence 48999999999886 56889999998876432 11 5699999999999999998754
No 460
>3tf7_C 42F3 MUT7 SCFV (42F3 alpha chain, linker, 42F3 BE; IG and MHC, antigen recognition, TCR-PMHC, membrane receptor system; 2.75A {Mus musculus}
Probab=98.92 E-value=7.8e-09 Score=59.54 Aligned_cols=57 Identities=9% Similarity=0.307 Sum_probs=43.5
Q ss_pred CCccEEEEEEeccCCCCeeEEeeCCc--cC-------------------------CCCCCCeEEEecCCCCCCeEEEEEE
Q psy12725 1 MLALKFFTCKYEGNPVKTISWMKDGK--PV-------------------------PDHNEPVFRIDSVRKEDKGMYQCVI 53 (119)
Q Consensus 1 ~g~~~~l~c~~~~~~~~~v~w~~~~~--~~-------------------------~~~~~~~l~~~~~~~~d~g~y~C~~ 53 (119)
.|+.++|.|.+.+. .+.+.|||... .. .......|.|.+++.+|.|.|+|.+
T Consensus 151 ~G~~v~L~C~~~~~-~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~L~I~~v~~~DsG~Y~C~a 229 (256)
T 3tf7_C 151 TGENVTLSCRQTNS-HNYMYWYRQDTGHELRLIYYSYGAGNLQIGDVPDGYKATRTTQEDFFLTLESASPSQTSLYFCAS 229 (256)
T ss_dssp TTCCEEECEEECSC-CSEEEEEEECTTSCEEEEEEEESTTCCEECSCCTTCEEECCSSSBCEEEESSCCGGGCEEEEEEE
T ss_pred CCCcEEEEEEcCCC-ceEEEEEEECCCCCeEEEEEEcCCCceecCccCCceEEEeCCCCeEEEEECCCCHHHCEEEEEEe
Confidence 48999999999875 67899998321 10 0112357999999999999999999
Q ss_pred EcCCC
Q psy12725 54 RNEQE 58 (119)
Q Consensus 54 ~~~~~ 58 (119)
.+..+
T Consensus 230 ~n~~g 234 (256)
T 3tf7_C 230 SDAPG 234 (256)
T ss_dssp EEETT
T ss_pred cCCCC
Confidence 88654
No 461
>1oga_D T-cell receptor alpha chain V region, beta-2-microglobulin; immune system/receptor, immune system/receptor/complex, TCR, MHC, immunodominance, FLU, complex; 1.40A {Homo sapiens} SCOP: b.1.1.1 b.1.1.2 PDB: 2xna_A 2xn9_A 2vlm_D 2vlk_D 2vlj_D 2vlr_D 2cdf_A 2wbj_C* 3qdm_D 3qeq_D
Probab=98.92 E-value=1.4e-08 Score=57.31 Aligned_cols=100 Identities=11% Similarity=0.222 Sum_probs=60.1
Q ss_pred CCccEEEEEEeccCCCCeeEEeeCC--ccC------CC-----------------CCCCeEEEecCCCCCCeEEEEEEEc
Q psy12725 1 MLALKFFTCKYEGNPVKTISWMKDG--KPV------PD-----------------HNEPVFRIDSVRKEDKGMYQCVIRN 55 (119)
Q Consensus 1 ~g~~~~l~c~~~~~~~~~v~w~~~~--~~~------~~-----------------~~~~~l~~~~~~~~d~g~y~C~~~~ 55 (119)
+|+.|+|.|.+. .....+.|||.. ... .. .....|.|.+++.+|+|.|.|.+..
T Consensus 15 ~G~~vtL~C~~~-~~~~~v~Wyrq~~g~~~~~li~~~~~~~~~~~~Rfs~~~~~~~~~~sL~I~~v~~~Dsg~Y~C~~~~ 93 (215)
T 1oga_D 15 EGENLTVYCNSS-SVFSSLQWYRQEPGEGPVLLVTVVTGGEVKKLKRLTFQFGDARKDSSLHITAAQPGDTGLYLCAGAG 93 (215)
T ss_dssp TTCCEEEEEECS-SCCSCEEEEEECTTSCCEEEEEECSTTCEEEETTEEEEECTTSSEEEEEESSCCGGGCEEEEEEEEC
T ss_pred cCCCEEEEEEEc-CCCceEEEEEeCCCCCcEEEEEEcCCCCcccCCCEEEEEcCCCCEEEEEEccCCcccCceEEEEEec
Confidence 489999999984 345679999742 111 00 0124789999999999999999986
Q ss_pred CCCCc--eeEeeEEEeeec--CCCeeeecCCccccCCCCcEEEEeEEccC-CCCeE
Q psy12725 56 EQESA--QASGELKLGGRF--DPPVIKESFSDETLNPGPNYYFKCIASGN-PTPEI 106 (119)
Q Consensus 56 ~~~~~--~~~~~~~v~~~~--~~~~~~~~~~~~~~~~g~~~~l~C~~~~~-p~~~~ 106 (119)
..... .....+.|.... ..|.+..... ....++|.|.+.+. |.+.+
T Consensus 94 ~~~~~~fg~gt~L~V~~~~~~~~P~V~~~~~-----~~~~vtL~C~~~gf~P~p~v 144 (215)
T 1oga_D 94 SQGNLIFGKGTKLSVKPNIQNPDPAVYQLRD-----SKSSDKSVCLFTDFDSQTNV 144 (215)
T ss_dssp TTSSEEECCCEEEEEECCCSSCCCEEEEEEB-----SSSSSCEEEEEESCCTTCCC
T ss_pred ccccceeCCCEEEEEeccCCCcCCEEEEcCC-----CCCCeEEEEEccccccCccc
Confidence 42111 122344444321 2343332211 12378999998774 55544
No 462
>3ux9_B SCFV antibody; five helices, long loop connecting helix, hydrophobic intera cytokine-immune system complex; 2.80A {Homo sapiens}
Probab=98.91 E-value=2.8e-09 Score=61.25 Aligned_cols=57 Identities=21% Similarity=0.389 Sum_probs=43.4
Q ss_pred CCccEEEEEEeccCC--CCeeEEeeCC--ccCC------C----------------------CCCCeEEEecCCCCCCeE
Q psy12725 1 MLALKFFTCKYEGNP--VKTISWMKDG--KPVP------D----------------------HNEPVFRIDSVRKEDKGM 48 (119)
Q Consensus 1 ~g~~~~l~c~~~~~~--~~~v~w~~~~--~~~~------~----------------------~~~~~l~~~~~~~~d~g~ 48 (119)
.|+.++|.|.+.+.+ .+.+.|||+. ..+. . .....|.|.+++.+|+|.
T Consensus 148 ~G~~v~L~C~~~~~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~I~~v~~~DsG~ 227 (256)
T 3ux9_B 148 PGGSLRLSCAASGFTFSSYAMSWVRQAPGKGLEWVSAISGSGGSTYYADSVKGRFTISRDNSKNTLYLQMNSLRAEDTAV 227 (256)
T ss_dssp TTCCEEEEEEEESSCGGGSEEEEEEECTTCCEEEEEEECSSSSCEEECGGGTTTEEEEEETTTTEEEEEECSCCGGGCEE
T ss_pred CCCeEEEEEEEeCCcccccEEEEEEECCCCCcEEEEEEccCCCceecCccccceEEEEecCCCCEEEEEECCCChhhCEE
Confidence 389999999998765 6799999862 2110 0 112349999999999999
Q ss_pred EEEEEEcCC
Q psy12725 49 YQCVIRNEQ 57 (119)
Q Consensus 49 y~C~~~~~~ 57 (119)
|.|.+.+..
T Consensus 228 Y~C~~~~~~ 236 (256)
T 3ux9_B 228 YYCARYIDF 236 (256)
T ss_dssp EEEEEEETT
T ss_pred EEEEEEcCC
Confidence 999999863
No 463
>1q0x_L FAB 9B1, light chain; anti-morphine antibody, FAB fragment, immune system; HET: PG4; 1.60A {Mus musculus} SCOP: b.1.1.1 b.1.1.2 PDB: 1q0y_L* 1ngp_L* 1ngq_L 3ks0_L* 1gig_L 2vir_A 2vis_A* 2vit_A 1sm3_L 4a6y_L 1ind_L* 1ine_L* 1yuh_L* 2zpk_L 3rhw_K* 3ri5_K* 3ria_K* 3rif_K* 1mfe_L* 1mfb_L* ...
Probab=98.90 E-value=1.4e-09 Score=60.85 Aligned_cols=56 Identities=23% Similarity=0.448 Sum_probs=43.0
Q ss_pred CccEEEEEEeccC-CCC-eeEEeeCCccCCCC---------CC------CeEEEecCCCCCCeEEEEEEEcCC
Q psy12725 2 LALKFFTCKYEGN-PVK-TISWMKDGKPVPDH---------NE------PVFRIDSVRKEDKGMYQCVIRNEQ 57 (119)
Q Consensus 2 g~~~~l~c~~~~~-~~~-~v~w~~~~~~~~~~---------~~------~~l~~~~~~~~d~g~y~C~~~~~~ 57 (119)
|+.+.|.|.+.+. |.+ .|.|++++..+... .. ..|.|......|.|.|+|.+.+..
T Consensus 130 g~~v~L~C~~~g~~p~~~~v~W~k~g~~l~~~~~~~~~~~~~~g~~~~~s~L~i~~~~~~d~g~Y~C~a~n~~ 202 (212)
T 1q0x_L 130 TAKATLVCTITDFYPGVVTVDWKVDGTPVTAGMETTQPSKQSNNKYMASSYLTLTARAWERHSSYSCQVTHEG 202 (212)
T ss_dssp TTEEEEEEEEEEEBSSCCEEEEEETTEEECTTEEECCCEECTTSCEEEEEEEEEEHHHHTTCCEEEEEEEETT
T ss_pred CCcEEEEEEEEEEeCCCeEEEEEECCEeCCCCeecCCceeCCCCCEEEEEEEEEcHHHccCCCcEEEEEEeCC
Confidence 7789999999875 433 89999998766421 11 246777777889999999999975
No 464
>2jjs_C Leukocyte surface antigen CD47; signal regulatory protein alpha, immunoglobulin superfamily, transmembrane, phosphoprotein, paired receptor; HET: NAG; 1.85A {Homo sapiens} PDB: 2jjt_C* 2vsc_A*
Probab=98.90 E-value=1.6e-09 Score=56.00 Aligned_cols=68 Identities=15% Similarity=0.304 Sum_probs=49.6
Q ss_pred CccEEEEEEeccCCC-----CeeEEeeCCccCCC-------------------------CCCCeEEEecCCC-CCCeEEE
Q psy12725 2 LALKFFTCKYEGNPV-----KTISWMKDGKPVPD-------------------------HNEPVFRIDSVRK-EDKGMYQ 50 (119)
Q Consensus 2 g~~~~l~c~~~~~~~-----~~v~w~~~~~~~~~-------------------------~~~~~l~~~~~~~-~d~g~y~ 50 (119)
|+.|+|.|.+...+. -.|.|.+++..+.. ..+.+|.|.+++. +|.|.|+
T Consensus 16 n~~vtLpC~l~~~~~~~~~~m~V~W~~~~~~i~~~~G~~~~~~q~~~~~~a~l~~~~l~~GnaSL~i~~v~~~sD~G~Yt 95 (127)
T 2jjs_C 16 NDTVVIPCFVTNMEAQNTTEVYVKWKFKGRDIYTFDGALNKSTVPTDFSSAKIEVSQLLKGDASLKMDKSDAVSHTGNYT 95 (127)
T ss_dssp CSEEEECCBBSSCCCSSGGGEEEEEEETTEEEEEEEGGGTEEECCGGGTTCBCCGGGGGGTBCCEEEEHHHHHTSCEEEE
T ss_pred CCCEEEEEEeCCcCCCCcceEEEEEEECCeEeEeeCCceeeccccccccceEechhhhccCcEEEEEcccccccCCcEEE
Confidence 789999999975332 36999987754321 1237899999998 6999999
Q ss_pred EEEEcCCCCceeEeeEEEe
Q psy12725 51 CVIRNEQESAQASGELKLG 69 (119)
Q Consensus 51 C~~~~~~~~~~~~~~~~v~ 69 (119)
|.+..........+.+.+.
T Consensus 96 C~v~~~~~~~~~~i~Lkv~ 114 (127)
T 2jjs_C 96 CEVTELTREGETIIELKYR 114 (127)
T ss_dssp EEEEETTEEEEEEEEEEEC
T ss_pred EEEEeCCceEEEEEEEEEE
Confidence 9999876545555555553
No 465
>1q9r_B S25-2 FAB (IGG1K) heavy chain; antigen-binding fragment, anti-carbohydrate, anti-LPS, antibody, immunoglobulin, KDO, complex, immune system; HET: KDA KDO; 1.45A {Mus musculus} SCOP: b.1.1.1 b.1.1.2 PDB: 1q9l_B 1q9k_B* 1q9q_B* 1q9v_B* 2r1w_B* 2r1x_B* 2r1y_B* 2r2b_B* 2r2e_B* 2r2h_B* 3bpc_B* 3sy0_B* 3t4y_B* 3t65_B* 2r23_B* 1q9t_B* 3t77_B* 3okl_B* 3okk_B* 3okm_B ...
Probab=98.90 E-value=7.6e-10 Score=62.37 Aligned_cols=58 Identities=16% Similarity=0.285 Sum_probs=45.0
Q ss_pred CccEEEEEEeccC-CCC-eeEEeeCCccCCCC-------C-----CCeEEEecCCCCCCeEEEEEEEcCCCCc
Q psy12725 2 LALKFFTCKYEGN-PVK-TISWMKDGKPVPDH-------N-----EPVFRIDSVRKEDKGMYQCVIRNEQESA 60 (119)
Q Consensus 2 g~~~~l~c~~~~~-~~~-~v~w~~~~~~~~~~-------~-----~~~l~~~~~~~~d~g~y~C~~~~~~~~~ 60 (119)
|+.++|.|.+.+. |.+ .+.|++++..+... . .+.|.|..+...| |.|+|.+.|..+..
T Consensus 142 g~~v~L~C~~~g~~P~p~~v~W~~~g~~~~~~~~~~~~~~~~~~~~s~L~i~~~~~~d-g~y~C~a~n~~~~~ 213 (222)
T 1q9r_B 142 NSMVTLGCLVKGYFPEPVTVTWNSGSLSSGVHTFPAVLQSDLYTLSSSVTVPSSTWPS-ETVTCNVAHPASST 213 (222)
T ss_dssp SSEEEEEEEEEEEBSSCCEEEEGGGTBCTTEEEEEEEEETTEEEEEEEEEEETTTTTT-SCCEEEEEEGGGTE
T ss_pred CCcEEEEEEEccEECCCCEEEEecCCeEcceEeccccccCCcEEEEEEEEECchhcCC-CeEEEEEEccCCCC
Confidence 7899999999885 877 99999998765320 1 1246777888888 99999999986544
No 466
>1c1e_H Catalytic antibody 1E9 (heavy chain); diels-alder, immunoglobulin, immune system; HET: ENH; 1.90A {Mus musculus} SCOP: b.1.1.1 b.1.1.2 PDB: 1dbb_H* 1dba_H* 1dbj_H* 1dbk_H* 1dbm_H* 2dbl_H* 3ojd_B 1jgl_H* 1jhk_H 1ghf_H 1tet_H* 3e8u_H 1fj1_B 1cl7_H
Probab=98.90 E-value=2.4e-09 Score=60.18 Aligned_cols=57 Identities=14% Similarity=0.271 Sum_probs=41.7
Q ss_pred CccEEEEEEecc-CCCC-eeEEeeCCccCCC---C----CC-----CeEEEecCCCCCCeEEEEEEEcCCCC
Q psy12725 2 LALKFFTCKYEG-NPVK-TISWMKDGKPVPD---H----NE-----PVFRIDSVRKEDKGMYQCVIRNEQES 59 (119)
Q Consensus 2 g~~~~l~c~~~~-~~~~-~v~w~~~~~~~~~---~----~~-----~~l~~~~~~~~d~g~y~C~~~~~~~~ 59 (119)
|+.+.|.|.+.+ .|.+ .|.|++++..+.. . .+ ..|.|.. ...|.|.|+|.+.|..+.
T Consensus 139 g~~v~L~C~~~g~~P~p~~v~W~~~g~~~~~~~~~~~~~~~~~~~~s~L~i~~-~~~d~g~Y~C~a~n~~~~ 209 (219)
T 1c1e_H 139 NSMVTLGCLVKGYFPEPVTVTWNSGSLSSGVHTFPAVLQSDLYTLSSSVTVPS-SPRPSETVTCNVAHPASS 209 (219)
T ss_dssp SSEEEEEEEEEEEBSSCCEEEEGGGTBCTTEEECCCEESSSCEEEEEEEEEES-SSTTTSCCEEEEEEGGGT
T ss_pred CCeEEEEEEcccccCCCeEEEEEeCCcccceEecCCcccCCeEEEEEEEEEec-ccCCCCEEEEEEEeCCCC
Confidence 789999999998 7888 9999999875421 0 11 2466643 344669999999997644
No 467
>1kgc_D T-cell receptor alpha chain; LC13 clone, immune system; 1.50A {Homo sapiens} SCOP: b.1.1.1 b.1.1.2 PDB: 1mi5_D 3kpr_D 3kps_D 3o6f_C 3t0e_C 3pqy_D 2esv_D 3dxa_D 3dx9_A
Probab=98.90 E-value=3.2e-08 Score=55.52 Aligned_cols=101 Identities=10% Similarity=0.178 Sum_probs=60.5
Q ss_pred CCccEEEEEEecc-CCCCeeEEeeCC--cc---C-C--------C---------CCCCeEEEecCCCCCCeEEEEEEEcC
Q psy12725 1 MLALKFFTCKYEG-NPVKTISWMKDG--KP---V-P--------D---------HNEPVFRIDSVRKEDKGMYQCVIRNE 56 (119)
Q Consensus 1 ~g~~~~l~c~~~~-~~~~~v~w~~~~--~~---~-~--------~---------~~~~~l~~~~~~~~d~g~y~C~~~~~ 56 (119)
.|+.|+|.|.+.+ .....+.|||.. .. + . . .....|.|.+++.+|+|.|.|.+.+.
T Consensus 13 ~G~~v~L~C~~s~~~~~~~v~Wyrq~~g~~~~~l~~~~~~~~~~~Rf~~~~~~~~~~~sL~I~~~~~~Dsg~Y~C~~~~~ 92 (206)
T 1kgc_D 13 EEEPVHLPCNHSTISGTDYIHWYRQLPSQGPEYVIHGLTSNVNNRMASLAIAEDRKSSTLILHRATLRDAAVYYCILPLA 92 (206)
T ss_dssp TTSCEEEEEEESCCCTTCCEEEEEECTTSCCEEEEEESSSSEECSSEEEEECTTSSEEEEEESSCCGGGCEEEEEECCCC
T ss_pred CCCCEEEEEEEcCCCCCccEEEEEECCCCCcEEEEEECCCCccCCCEEEEEcCCCCEEEEEECCCCcccCccEEEEEecc
Confidence 4899999999976 334579999732 11 1 0 0 01247899999999999999998763
Q ss_pred C------CCceeEeeEEEeeec--CCCeeeecCCccccCCCCcEEEEeEEccC-CCCeE
Q psy12725 57 Q------ESAQASGELKLGGRF--DPPVIKESFSDETLNPGPNYYFKCIASGN-PTPEI 106 (119)
Q Consensus 57 ~------~~~~~~~~~~v~~~~--~~~~~~~~~~~~~~~~g~~~~l~C~~~~~-p~~~~ 106 (119)
. ........+.|.... ..|.+..... ..+.+.|.|.+.+. |.+.+
T Consensus 93 ~~~~~~~~~~g~gt~L~V~~~~~~~~P~V~~~~~-----~~~~v~L~C~~~g~~P~~~V 146 (206)
T 1kgc_D 93 GGTSYGKLTFGQGTILTVHPNIQNPDPAVYQLRD-----SKSSDKSVCLFTDFDSQTNV 146 (206)
T ss_dssp STTCCCCCCCCCCEEEEEECCCSSCCCEEEECCC-----CTTCCCEEEEEESCCTTCCC
T ss_pred cCCCcccceECCCEEEEEeCCCCCCCCeEEeecC-----CCCCeEEEEEeeceeccccc
Confidence 1 111223345554321 2244333221 12378999998774 55544
No 468
>3gkz_A Anti-methamphetamine single chain FV; therapeutic antibody, MDMA, IGG, immune system; HET: B40; 1.90A {Mus musculus} PDB: 3gm0_A* 1rvf_L 3ab0_C 2a0l_C 3iy5_A
Probab=98.89 E-value=5.4e-09 Score=60.16 Aligned_cols=57 Identities=18% Similarity=0.233 Sum_probs=43.2
Q ss_pred CCccEEEEEEeccCCCC-eeEEeeC--CccCCC---------------------CCCCeEEEecCCCCCCeEEEEEEEcC
Q psy12725 1 MLALKFFTCKYEGNPVK-TISWMKD--GKPVPD---------------------HNEPVFRIDSVRKEDKGMYQCVIRNE 56 (119)
Q Consensus 1 ~g~~~~l~c~~~~~~~~-~v~w~~~--~~~~~~---------------------~~~~~l~~~~~~~~d~g~y~C~~~~~ 56 (119)
.|+.|+|.|.+.+.+.+ .+.|+|. +..+.. .....|.|.+++.+|+|.|.|.+.+.
T Consensus 155 ~G~~v~L~C~~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~D~G~Y~C~~~~~ 234 (257)
T 3gkz_A 155 PGEKVTLTCSASSSVSSSHLYWYQQKPGSSPKLWIYSTSNLASGVPARFSGSGSGTSYSLTISSMEAEDAASYFCHQWSS 234 (257)
T ss_dssp TTCCEEEEEEESSCCCGGGEEEEEECTTSCCEEEEETTTEECTTCCTTEEEEEETTEEEEEESSCCGGGCEEEEEEECSS
T ss_pred CCCcEEEEEEEccCccceEEEEEEECCCCCcEEEEEEccccCCCcCCCEEEecCCCEEEEEECCCChHHCEEEEEEEccC
Confidence 48999999999987776 8999984 222210 01235999999999999999999875
Q ss_pred C
Q psy12725 57 Q 57 (119)
Q Consensus 57 ~ 57 (119)
.
T Consensus 235 ~ 235 (257)
T 3gkz_A 235 F 235 (257)
T ss_dssp S
T ss_pred C
Confidence 3
No 469
>3u6r_L Antibody 1:7 (light chain); IG-like domain, neutralizing single chain FV, immune system; 2.67A {Homo sapiens}
Probab=98.89 E-value=6.6e-09 Score=55.09 Aligned_cols=69 Identities=13% Similarity=0.250 Sum_probs=46.8
Q ss_pred CCccEEEEEEeccCCCCeeEEeeCC--ccCC------------C---------CCCCeEEEecCCCCCCeEEEEEEEcCC
Q psy12725 1 MLALKFFTCKYEGNPVKTISWMKDG--KPVP------------D---------HNEPVFRIDSVRKEDKGMYQCVIRNEQ 57 (119)
Q Consensus 1 ~g~~~~l~c~~~~~~~~~v~w~~~~--~~~~------------~---------~~~~~l~~~~~~~~d~g~y~C~~~~~~ 57 (119)
.|+.|+|.|.+.......+.|||.. ..+. . .....|.|.+++.+|+|.|+|.+.+..
T Consensus 14 ~G~~vtL~C~~s~~~~~~v~Wyrq~~g~~~~~li~~~~~~~~~~~~Rfs~~~~~~~~sL~I~~l~~~DsG~Y~C~~~~~~ 93 (143)
T 3u6r_L 14 PGERATLSCRASQSVNKYLAWYQQKPGQAPRLLIYDASNRATGIPARFSGSGSGTDFTLTISNLEPEDFAVYYCQQRSDW 93 (143)
T ss_dssp TTCCEEEEEEESSCCTTCEEEEEECTTSCCEEEEETTTEECTTCCTTEEEEEETTEEEEEECSCCGGGCEEEEEEECSSB
T ss_pred CCCCEEEEEEECCCCceeeEEEEECCCCCCEEEEEeCCccCCCccCcEeEEccCCEEEEEEccCcccCCEEEEEEEecCC
Confidence 4899999999987666789999842 2110 0 022468999999999999999987653
Q ss_pred CCceeEeeEEEe
Q psy12725 58 ESAQASGELKLG 69 (119)
Q Consensus 58 ~~~~~~~~~~v~ 69 (119)
........+.|.
T Consensus 94 ~~fg~gt~L~V~ 105 (143)
T 3u6r_L 94 VTFGGGTKVEIK 105 (143)
T ss_dssp CEECCCEEEEEC
T ss_pred CEECCCEEEEEC
Confidence 122223445543
No 470
>3nl4_L Antigen binding fragment, immunoglobulin IGG - LI; FAB, rabbit, conformation-specific, amyloid, immune system; 1.54A {Oryctolagus cuniculus} PDB: 4hbc_L
Probab=98.89 E-value=2.6e-09 Score=59.72 Aligned_cols=53 Identities=17% Similarity=0.353 Sum_probs=43.8
Q ss_pred CccEEEEEEecc-CCCCeeEEeeCCccCCCC----------CC------CeEEEecCCCCCCeEEEEEEE
Q psy12725 2 LALKFFTCKYEG-NPVKTISWMKDGKPVPDH----------NE------PVFRIDSVRKEDKGMYQCVIR 54 (119)
Q Consensus 2 g~~~~l~c~~~~-~~~~~v~w~~~~~~~~~~----------~~------~~l~~~~~~~~d~g~y~C~~~ 54 (119)
|+.++|.|.+.+ .|.+.+.|++++..+... .. +.|.|..+...|.|.|+|.+.
T Consensus 129 g~~v~l~C~~~g~~P~~~v~W~k~g~~~~~~~~~~~~~~~~~~~~~~~~s~L~i~~~~~~d~g~Y~C~a~ 198 (213)
T 3nl4_L 129 TGTVTIVCVANKYFPDVTVTWEVDGTTQTTGIENSKTPQNSADCTYNLSSTLTLTSTEYNSHKEYTCKVT 198 (213)
T ss_dssp TSEEEEEEEEEEEBSCCEEEEEETTEECCSSEEEEECCCCTTTCCEEEEEEEEEEHHHHHTCCEEEEEEE
T ss_pred CCcEeEEEEEecccCCcEEEEEeCCccCCCCeecccCcccCCCCeEEEEEEEEecHHHcCCCCeEEEEEE
Confidence 789999999988 788999999998876421 11 347788888999999999999
No 471
>2aw2_A B and T lymphocyte attenuator; IGI domain, IGG domain, TNFRSF, protein-protein complex, IMM system; HET: NAG FUL; 2.80A {Homo sapiens} SCOP: b.1.1.1
Probab=98.89 E-value=2.5e-08 Score=49.39 Aligned_cols=60 Identities=15% Similarity=0.284 Sum_probs=46.4
Q ss_pred CCccEEEEEEecc-CCCCeeEEeeCC----ccCCC------CCCC----eEEEecCCCCCCeEEEEEEEcCCCCc
Q psy12725 1 MLALKFFTCKYEG-NPVKTISWMKDG----KPVPD------HNEP----VFRIDSVRKEDKGMYQCVIRNEQESA 60 (119)
Q Consensus 1 ~g~~~~l~c~~~~-~~~~~v~w~~~~----~~~~~------~~~~----~l~~~~~~~~d~g~y~C~~~~~~~~~ 60 (119)
.|+++.|.|.+.+ .+.|.|+|-|-+ ..+.. +.+. .|.+..+...|.|.|.|.+....+..
T Consensus 25 ~G~~f~leCpv~yc~~rP~VtWcKln~~~c~~L~~~~q~w~E~~N~s~fvLhf~~V~~sDsGsYRCsAn~~sg~i 99 (120)
T 2aw2_A 25 AGDPFELECPVKYCANRPHVTWCKLNGTTCVKLEDRQTSWKEEKNISFFILHFEPVLPNDNGSYRCSANFQSNLI 99 (120)
T ss_dssp TTSCEEEEEEEECSSSCCEEEEEEECSSCEEECCSSCEEEEECSSCEEEEEEESSCCGGGCEEEEEEEEETTEEE
T ss_pred cCCeEEEEccEEeccCCCceEEEecCCceEEECccccccceecCCeeEEEEEEeeeeEcCCcceEEEeeCCCCcE
Confidence 4899999999988 478999999844 33432 1223 68889999999999999999875443
No 472
>3d85_D IL-12B, interleukin-12 subunit P40, cytotoxic lymphocyte; FAB, immune system/cytokine complex; 1.90A {Homo sapiens} SCOP: b.1.1.4 b.1.2.1 b.1.2.1 PDB: 3d87_B* 3duh_A* 1f42_A* 1f45_A* 3hmx_A* 3qwr_A*
Probab=98.89 E-value=1.7e-08 Score=59.86 Aligned_cols=51 Identities=20% Similarity=0.264 Sum_probs=42.3
Q ss_pred CCccEEEEEEeccCCCCeeEEeeCCccCCCCCCCeEEEecCCCCCCeEEEEEE
Q psy12725 1 MLALKFFTCKYEGNPVKTISWMKDGKPVPDHNEPVFRIDSVRKEDKGMYQCVI 53 (119)
Q Consensus 1 ~g~~~~l~c~~~~~~~~~v~w~~~~~~~~~~~~~~l~~~~~~~~d~g~y~C~~ 53 (119)
.|+.|+|.|.+.. +. .|.|.+++.......+..|.|..+...|.|.|+|.+
T Consensus 20 ~G~~v~l~C~~~~-~~-~i~W~~~~~~~~~~~~~~L~i~~~~~~d~G~YtC~~ 70 (306)
T 3d85_D 20 PGEMVVLTCDTPE-ED-GITWTLDQSSEVLGSGKTLTIQVKEFGDAGQYTCHK 70 (306)
T ss_dssp CCEEEEEECSSSC-CS-SCEEEETTCCCCCEESSEEEEEECSGGGCEEEEEEE
T ss_pred cCCcEEEECCCCC-CC-cCEEEECCccccCCCCCEEEEEecCcCCCceEEEee
Confidence 4899999998874 33 799999988544345678999999999999999998
No 473
>2q86_A Valpha14 TCR; INKT cells, TCR, glycolipid recognition, innate immunity, IM system; HET: NAG BMA MAN FUC; 1.85A {Mus musculus} PDB: 3quy_C* 3o9w_C* 3qux_C* 3o8x_C* 3quz_C* 3rtq_C* 3rzc_C* 3ta3_C* 3tvm_C* 3qi9_C* 3ard_C* 3are_C* 3arf_C* 3arg_C* 3he6_C* 3he7_C* 3arb_C* 3scm_C* 3sda_C* 3sdc_C* ...
Probab=98.89 E-value=1e-08 Score=58.43 Aligned_cols=101 Identities=16% Similarity=0.300 Sum_probs=61.0
Q ss_pred CCccEEEEEEeccCCCCeeEEeeCC--ccCC-----------------------CCCCCeEEEecCCCCCCeEEEEEEEc
Q psy12725 1 MLALKFFTCKYEGNPVKTISWMKDG--KPVP-----------------------DHNEPVFRIDSVRKEDKGMYQCVIRN 55 (119)
Q Consensus 1 ~g~~~~l~c~~~~~~~~~v~w~~~~--~~~~-----------------------~~~~~~l~~~~~~~~d~g~y~C~~~~ 55 (119)
.|+.|+|.|.+.+.....+.|||.. ..+. ......|.|.+++.+|+|.|.|.+.+
T Consensus 15 ~G~svtL~C~~s~~~~~~v~Wyrq~~g~~~~~l~~~~~~~~~~~~~Rfs~~~~~~~~~~sL~I~~~~~~Dsg~Y~C~~~~ 94 (229)
T 2q86_A 15 QGENCVLQCNYSVTPDNHLRWYKQDTGKGLVLLTVLVDQKDKTSNGRYSATLDKDAKHSTLHITATLLDDTATYFCVVGD 94 (229)
T ss_dssp TTCCEEEEEEECCSCCSCEEEEEECTTCCEEEEEEECSSEEEEEETTEEEEEETTTTEEEEEECSCCGGGCEEEEEEESC
T ss_pred cCCCEEEEEEECCCCCcEEEEEEECCCCCcEEEEEEcCCCCcccCCCEEEEEcCCCCEEEEEEcccCcccCccEEEEEEe
Confidence 4899999999976655679999732 1110 01124789999999999999999875
Q ss_pred CCC-CceeEeeEEEeeec--CCCeeeecCCccccCCCCcEEEEeEEcc-CCCCeE
Q psy12725 56 EQE-SAQASGELKLGGRF--DPPVIKESFSDETLNPGPNYYFKCIASG-NPTPEI 106 (119)
Q Consensus 56 ~~~-~~~~~~~~~v~~~~--~~~~~~~~~~~~~~~~g~~~~l~C~~~~-~p~~~~ 106 (119)
... .......+.|.... .+|.+..... ....++|.|.+.+ .|.+.+
T Consensus 95 ~~~~~~g~gt~L~V~~~~~~~~P~V~~~~~-----~~~~~tL~Cl~~gf~P~p~V 144 (229)
T 2q86_A 95 RGSALFGSGTQLIVIPYIQNPEPAVYQLKD-----PRSQDSTLCLFTDFDSQINV 144 (229)
T ss_dssp GGGCEECCCEEEEEECCCSSCCCEEEEEEC-----TTSTTCEEEEEEEECTTCCC
T ss_pred cCcccccCCEEEEEECcCCCCCCEEEEccC-----CCCCeEEEEEECCcCcCCcc
Confidence 321 11122344543321 2333333211 1227889999877 355544
No 474
>1i3g_L Antibody FV fragment; antibiotic; 2.44A {Mus musculus} SCOP: b.1.1.1 PDB: 3iy6_A
Probab=98.88 E-value=5.9e-09 Score=52.87 Aligned_cols=56 Identities=18% Similarity=0.270 Sum_probs=42.5
Q ss_pred CCccEEEEEEeccCCCCeeEEeeCCc--c---C-C--------CC---------CCCeEEEecCCCCCCeEEEEEEEcC
Q psy12725 1 MLALKFFTCKYEGNPVKTISWMKDGK--P---V-P--------DH---------NEPVFRIDSVRKEDKGMYQCVIRNE 56 (119)
Q Consensus 1 ~g~~~~l~c~~~~~~~~~v~w~~~~~--~---~-~--------~~---------~~~~l~~~~~~~~d~g~y~C~~~~~ 56 (119)
.|+.|+|.|.+.+.+.+.+.||+... . + . .. ....|.|.+++.+|+|.|.|.+.+.
T Consensus 18 ~G~~v~L~C~~~~~~~~~v~W~r~~~~~~~~~l~~~~~~~~~~~~~R~~~~~~~~~~~L~I~~v~~~DsG~Y~C~~~~~ 96 (111)
T 1i3g_L 18 VGDRVSITCKASQDVGTAVAWYQQKPGQSPKLLIYWASTRHTGVPDRFTGSGSGTDFTLTISNVQSEDLADYFCQQYSS 96 (111)
T ss_dssp TTCCEEEEEEESSCCTTCEEEEEECTTSCCEEEEETTTEECTTCCTTEEEEEETTEEEEEESSCCGGGCSEEEEEECSS
T ss_pred CCCCEEEEEEeCCCCCCCEEEEEECCCCCCEEEEEECCccCCCCCCcEEEEcCCCEEEEEECCCCHHHCEEEEEEEecC
Confidence 48999999999876677899998531 1 1 0 00 1236899999999999999999865
No 475
>1xiw_B T-cell surface glycoprotein CD3 delta chain; CD3-epsilon, CD3-delta, UCHT1-SCFV, immunoglobulin fold, antibody-antigen complex; 1.90A {Homo sapiens} SCOP: b.1.1.4
Probab=98.88 E-value=2.5e-09 Score=50.85 Aligned_cols=59 Identities=12% Similarity=0.286 Sum_probs=40.0
Q ss_pred CccEEEEEEeccCCCCeeEEeeCCccCCCCCCCeEEEecCCCCCCeEEEEEEEcCCCCceeEeeE
Q psy12725 2 LALKFFTCKYEGNPVKTISWMKDGKPVPDHNEPVFRIDSVRKEDKGMYQCVIRNEQESAQASGEL 66 (119)
Q Consensus 2 g~~~~l~c~~~~~~~~~v~w~~~~~~~~~~~~~~l~~~~~~~~d~g~y~C~~~~~~~~~~~~~~~ 66 (119)
|+.|.|+| .+.|.|++++..+.......|.+......+.|.|.|.+.+..+...+...|
T Consensus 9 g~~V~LtC------~~~i~W~k~~~~i~~~~~~tL~L~~~~~d~sG~Y~C~~~~~~~~~~s~LqV 67 (79)
T 1xiw_B 9 EDRVFVNC------NTSITWVEGTVGTLLSDITRLDLGKRILDPRGIYRCNGTDIYKDKESTVQV 67 (79)
T ss_dssp TTEEEEEC------SSCEEEEEECCCEEEGGGTEEEEEEGGGCCEEEEEEC--------CEEEEE
T ss_pred CCEEEEEc------CCCEEEEECCcccccccCCeEEeccCcCCCCeEEEecCCCCCCcccEEEEE
Confidence 78999999 356999999887655557788888888889999999888765543333333
No 476
>3eow_R Poliovirus receptor; immunoglobulin super family, alternative splicing, cell adhesion, cell membrane, glycoprotein, HOST-virus interaction; 3.50A {Homo sapiens} PDB: 3uro_R 3epc_R* 3epd_R* 3epf_R*
Probab=98.88 E-value=4.9e-09 Score=58.99 Aligned_cols=66 Identities=15% Similarity=0.226 Sum_probs=47.2
Q ss_pred CccE-EEEEEec-cCCCCeeEEeeCCccCCC-------C-----CCCeEEEecCCCCCCeEEEEEEEcCCCCceeEeeEE
Q psy12725 2 LALK-FFTCKYE-GNPVKTISWMKDGKPVPD-------H-----NEPVFRIDSVRKEDKGMYQCVIRNEQESAQASGELK 67 (119)
Q Consensus 2 g~~~-~l~c~~~-~~~~~~v~w~~~~~~~~~-------~-----~~~~l~~~~~~~~d~g~y~C~~~~~~~~~~~~~~~~ 67 (119)
|+.+ .|.|.+. +.|.+.++|++++..... . ..+.|.|......|.|.|+|.+.|..........+.
T Consensus 130 g~~~~~l~C~~~~g~P~p~v~W~k~~~~~~~~~~~~~~~~~~~~~~s~L~i~~~~~~d~g~ytC~a~n~~~~~~~~~~v~ 209 (221)
T 3eow_R 130 GEPVPMARCVSTGGRPPAQITWHSDLGGMPQTSQVPGFLSGTVTVTSLWILVPSSQVDGKQVTCKVEHESFEKPQLLTVS 209 (221)
T ss_dssp SSSCCEEEEEEESCSSCCCEEEECSSSCCCCCEEECCCCBTTBCCEEEEECCCCSCCCCCCEEEEECCSCSSSCEEEEEC
T ss_pred CceEEEEEEECCCccCCCeeEEEeCCCCCCccceeecCCCCcEEEEEEEEEeCCHHHCCCeEEEEEECCCCCCCeEEEEE
Confidence 5677 5999987 778899999987433211 0 124678888889999999999999875544444333
No 477
>3noi_A Natural cytotoxicity triggering receptor 3; immune system, innate immunity, immunoglobulin-like I2 type natural killer cell activation; HET: 1PG; 1.84A {Homo sapiens} PDB: 3pv6_B*
Probab=98.88 E-value=7.8e-09 Score=53.12 Aligned_cols=56 Identities=21% Similarity=0.558 Sum_probs=42.3
Q ss_pred CCccEEEEEEeccCC----CCeeEEeeCC----ccCC-------------------CCCCCeEEEecCCCCCCeEEEEEE
Q psy12725 1 MLALKFFTCKYEGNP----VKTISWMKDG----KPVP-------------------DHNEPVFRIDSVRKEDKGMYQCVI 53 (119)
Q Consensus 1 ~g~~~~l~c~~~~~~----~~~v~w~~~~----~~~~-------------------~~~~~~l~~~~~~~~d~g~y~C~~ 53 (119)
.|+.|+|.|.+...+ ...+.|||.. ..+. .....+|.|.+++.+|+|.|.|.+
T Consensus 21 ~G~~v~L~C~~~~~~~~~~~~~v~W~r~~~~~g~~~~~~~~~~~~R~~~~~~~~~~~~~~~sL~I~~v~~~DsG~Y~C~v 100 (120)
T 3noi_A 21 EGSSAFLPCSFNASQGRLAIGSVTWFRDEVVPGKEVRNGTPEFRGRLAPLASSRFLHDHQAELHIRDVRGHDASIYVCRV 100 (120)
T ss_dssp TTSCEEECCEECCCTTSCCCEEEEEEESSCSTTCBCCTTCTTTTTCEECCCHHHHHTTCBCCEEESSCCGGGCEEEEEEE
T ss_pred cCCCEEEEeeecCCCCCCceeEEEEEeccCCCCceecccccccCCcEEeecccccccCCcEEEEEecCChhhCEEEEEEE
Confidence 489999999997654 4579999864 2221 112347999999999999999998
Q ss_pred EcC
Q psy12725 54 RNE 56 (119)
Q Consensus 54 ~~~ 56 (119)
...
T Consensus 101 ~~~ 103 (120)
T 3noi_A 101 EVL 103 (120)
T ss_dssp EET
T ss_pred EEC
Confidence 854
No 478
>3rrq_A Protein PD-1, programmed cell death protein 1; programmed death-1, costimulatory, immune system; 2.10A {Homo sapiens}
Probab=98.88 E-value=1.4e-08 Score=52.84 Aligned_cols=58 Identities=16% Similarity=0.323 Sum_probs=42.1
Q ss_pred CCccEEEEEEeccCC-CCeeEEeeC--CccCC------------------------CCCCCeEEEecCCCCCCeEEEEEE
Q psy12725 1 MLALKFFTCKYEGNP-VKTISWMKD--GKPVP------------------------DHNEPVFRIDSVRKEDKGMYQCVI 53 (119)
Q Consensus 1 ~g~~~~l~c~~~~~~-~~~v~w~~~--~~~~~------------------------~~~~~~l~~~~~~~~d~g~y~C~~ 53 (119)
.|+.|+|.|.+.+.. ...+.||+. +.... ......|.|.+++.+|+|.|.|.+
T Consensus 15 ~G~~vtL~C~~s~~~~~~~v~Wyrq~~g~~~~~l~~~~~~~~~~~~~~Rf~~~~~~~~~~~sL~I~~~~~~Dsg~Y~C~~ 94 (129)
T 3rrq_A 15 EGDNATFTCSFSNTSESFVLNWYRMSPSNQTDKLAAFPEDRSQPGQDCRFRVTQLPNGRDFHMSVVRARRNDSGTYLCGA 94 (129)
T ss_dssp TTSCEEEEEECCCCC-CEEEEEEEEESTTSCEEEEEETC--------CCEEEEECTTSSEEEEEESSCCGGGCEEEEEEE
T ss_pred CCCCEEEEeEecCCCCCcEEEEeEeCCCCCccEEEEEcCCccCCCcCCcEEEEEcCCCCEEEEEECCCChhHCEEEEEEE
Confidence 489999999997654 457999973 21110 001246899999999999999999
Q ss_pred EcCCC
Q psy12725 54 RNEQE 58 (119)
Q Consensus 54 ~~~~~ 58 (119)
.+...
T Consensus 95 ~~~~~ 99 (129)
T 3rrq_A 95 ISLAP 99 (129)
T ss_dssp EECGG
T ss_pred EecCC
Confidence 87643
No 479
>3moq_A NEW antigen receptor variable domain, P3(40) PEPT amyloid beta A4 protein; AB-ignar, AB-12Y-2, glycoprotein, membran protease inhibitor; 2.05A {Orectolobus maculatus} PDB: 2z8w_C 2z8v_C 1ves_A 1ver_A
Probab=98.87 E-value=7.5e-09 Score=53.74 Aligned_cols=57 Identities=21% Similarity=0.362 Sum_probs=42.6
Q ss_pred CCccEEEEEEeccC--CCCeeEEeeC--CccCC---------------CCCCCeEEEecCCCCCCeEEEEEEEcCC
Q psy12725 1 MLALKFFTCKYEGN--PVKTISWMKD--GKPVP---------------DHNEPVFRIDSVRKEDKGMYQCVIRNEQ 57 (119)
Q Consensus 1 ~g~~~~l~c~~~~~--~~~~v~w~~~--~~~~~---------------~~~~~~l~~~~~~~~d~g~y~C~~~~~~ 57 (119)
.|+.++|.|.+.+. +...+.|||. +.... ......|.|.+++.+|+|.|+|.+.+..
T Consensus 14 ~G~svtL~C~~s~~~~~~~~v~Wyrq~~g~~~~~li~~~~R~~~~~~~~~~~~sL~I~~v~~~DsG~Y~C~~~~~~ 89 (126)
T 3moq_A 14 TGESLTINCVLRDASFELKDTGWYRTKLGSTNEQSISIGGRYVETVNKGSKSFSLRISDLRVEDSGTYKCQAFYVF 89 (126)
T ss_dssp TTCCEEEEEEEESCSSCCCEEEEEEEETTCCCCEECCCBTTEEEEEETTTTEEEEEECSCCGGGCEEEEEEEEEEE
T ss_pred CCCCEEEEEEeecCccCCceEEEEEeCCCCCceEEEEeCCcEEEEEeCCCCEEEEEECcCChHhCEEEEEEEEEcC
Confidence 48999999999765 4567999983 22210 0123579999999999999999987753
No 480
>3pv7_A B7-H6, IG-like domain-containing protein DKFZP686O24166/DKFZP686I21167; NK cell receptor, receptor-ligand complex, immune system; HET: NAG; 2.00A {Homo sapiens} PDB: 3pv6_A*
Probab=98.87 E-value=5.6e-09 Score=59.72 Aligned_cols=68 Identities=21% Similarity=0.494 Sum_probs=44.7
Q ss_pred CccEEEEEEecc-CCCC-eeEEeeCCccCCC----------------CC-----CCeEEEecCCCCCCeEEEEEEEcCCC
Q psy12725 2 LALKFFTCKYEG-NPVK-TISWMKDGKPVPD----------------HN-----EPVFRIDSVRKEDKGMYQCVIRNEQE 58 (119)
Q Consensus 2 g~~~~l~c~~~~-~~~~-~v~w~~~~~~~~~----------------~~-----~~~l~~~~~~~~d~g~y~C~~~~~~~ 58 (119)
|+.+.|.|.+.+ .|.+ .+.|++++..+.. .. ...|.+......|.|.|+|.+.|..+
T Consensus 133 ~~~~~L~C~~~g~~P~pi~v~W~k~g~~l~~~~~~~~~~~~~~~~~~~~~~~~~~s~L~i~~~~~~d~g~YtC~a~n~~~ 212 (248)
T 3pv7_A 133 ENEDKYMCESSGFYPEAINITWEKQTQKFPHPIEISEDVITGPTIKNMDGTFNVTSCLKLNSSQEDPGTVYQCVVRHASL 212 (248)
T ss_dssp ---CEEEEEEEEEBSSCCEEEEEEECSSSCSCEEECTTEEEEEEEECTTSCEEEEEEEECC--CCCTTCEEEEEEECTTC
T ss_pred CCCcEEEEEEccEECCCeEEEEEECCccCCCccccccceeecccEECCCCCEEEEEEEEEcCccccCCCEEEEEEECCCC
Confidence 567789999998 6888 9999999864321 11 13466666777889999999999876
Q ss_pred CceeEeeEEEe
Q psy12725 59 SAQASGELKLG 69 (119)
Q Consensus 59 ~~~~~~~~~v~ 69 (119)
.......+.+.
T Consensus 213 ~~~~~~~v~l~ 223 (248)
T 3pv7_A 213 HTPLRSNFTLT 223 (248)
T ss_dssp SSCEEEEECC-
T ss_pred CCCcEEEEEEE
Confidence 64444444443
No 481
>3kg5_A B-cell antigen receptor complex-associated protei chain; CD79B, IG-beta, BCR, immunoglobulin domain, protein binding; 3.20A {Homo sapiens}
Probab=98.86 E-value=1.6e-08 Score=53.08 Aligned_cols=55 Identities=18% Similarity=0.358 Sum_probs=42.4
Q ss_pred CCccEEEEEEeccCCCCeeEEeeC---CccCC-------------CCCCCeEEEecCCCCCCeEEEEEEEcC
Q psy12725 1 MLALKFFTCKYEGNPVKTISWMKD---GKPVP-------------DHNEPVFRIDSVRKEDKGMYQCVIRNE 56 (119)
Q Consensus 1 ~g~~~~l~c~~~~~~~~~v~w~~~---~~~~~-------------~~~~~~l~~~~~~~~d~g~y~C~~~~~ 56 (119)
.|+.|+|.|.+.+. ...+.|||. +..+. ......|.|.+++.+|+|.|+|.+.+.
T Consensus 32 ~G~svtL~C~~s~~-~~~v~Wyrq~~~g~~~~~l~~~~~rf~~~~~~~~~~L~I~~~~~~Dsg~Y~C~~~~~ 102 (134)
T 3kg5_A 32 RGFTVKMHCYMNSA-SGNVSWLWKQEMDENPQQLKLEKGRMEESQNESLATLTIQGIRFEDNGIYFCQQKCN 102 (134)
T ss_dssp TTCCEEEEEECCCT-TCCCEEEEESSSSSCCEECCCCTTTEEEEECSSEEEEEECSCCTTTCEEEEEEEECT
T ss_pred CCCCEEEEEEECCC-CceEEEEEECCCCCCcEEEEEECCeEEEEccCCEEEEEECCCCcCcCEEEEEEEEcC
Confidence 48999999999764 467999986 33221 012357999999999999999999875
No 482
>3auv_A SC-DSFV derived from the G6-FAB; SC-DSFV (disulfide-stabilized SCFV), SCFV, monovalent antibo antibody engineering, immune system; 2.40A {Homo sapiens} PDB: 2kh2_B 3iy0_L
Probab=98.86 E-value=1.2e-08 Score=59.47 Aligned_cols=56 Identities=21% Similarity=0.320 Sum_probs=43.1
Q ss_pred CCccEEEEEEeccCC--CCeeEEeeCC--ccC-----------------CCC-----------CCCeEEEecCCCCCCeE
Q psy12725 1 MLALKFFTCKYEGNP--VKTISWMKDG--KPV-----------------PDH-----------NEPVFRIDSVRKEDKGM 48 (119)
Q Consensus 1 ~g~~~~l~c~~~~~~--~~~v~w~~~~--~~~-----------------~~~-----------~~~~l~~~~~~~~d~g~ 48 (119)
.|+.++|.|.+.+.+ .+.+.|+|++ ... ... ....|.|.+++.+|.|.
T Consensus 148 ~G~~v~L~C~~~g~~~~~~~v~W~k~~~g~~~~~l~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~I~~v~~~DsG~ 227 (276)
T 3auv_A 148 PGGSLRLSCAASGFTISDYWIHWVRQAPGKCLEWVAGITPAGGYTYYADSVKGRFTISADTSKNTAYLQMNSLRAEDTAV 227 (276)
T ss_dssp TTCCEEEEEEEESSCGGGSEEEEEEECTTCCEEEEEEECGGGCCEEECTTTTTTEEEEEEGGGTEEEEEECSCCGGGCEE
T ss_pred CCCeEEEEEEecCccCCCCEEEEEEcCCCCCcEEEEEEeccCCccccccccCCcEEEEecCCCcEEEEEECCCChhHCEE
Confidence 389999999998765 5899999963 111 000 11379999999999999
Q ss_pred EEEEEEcC
Q psy12725 49 YQCVIRNE 56 (119)
Q Consensus 49 y~C~~~~~ 56 (119)
|.|.+.|.
T Consensus 228 Y~C~a~n~ 235 (276)
T 3auv_A 228 YYCARFVF 235 (276)
T ss_dssp EEEEEECS
T ss_pred EEEEEEcC
Confidence 99999997
No 483
>3s96_B 3B5H10 FAB light chain; huntingtin, immune system; 1.90A {Mus musculus} PDB: 2qhr_L 3ffd_B 4dcq_A
Probab=98.85 E-value=2.5e-09 Score=59.96 Aligned_cols=57 Identities=16% Similarity=0.448 Sum_probs=41.1
Q ss_pred CccEEEEEEecc-CCCC-eeEEeeCCccCCCC--------CC------CeEEEecCCCCCCeEEEEEEEcCCC
Q psy12725 2 LALKFFTCKYEG-NPVK-TISWMKDGKPVPDH--------NE------PVFRIDSVRKEDKGMYQCVIRNEQE 58 (119)
Q Consensus 2 g~~~~l~c~~~~-~~~~-~v~w~~~~~~~~~~--------~~------~~l~~~~~~~~d~g~y~C~~~~~~~ 58 (119)
|+.+.|.|.+.+ .|.+ .+.|++++..+... .. ..|.+......|.|.|+|.+.|..+
T Consensus 136 ~~~v~L~C~~~g~~p~~~~v~W~k~g~~l~~~~~~~~~~~~~~~~~~~s~l~i~~~~~~d~g~Y~C~a~n~~~ 208 (218)
T 3s96_B 136 ENKATLVCLISNFSPSGVTVAWKANGTPITQGVDTSNPTKEGNKFMASSFLHLTSDQWRSHNSFTCQVTHEGD 208 (218)
T ss_dssp TTEEEEEEEEEEEBSSCCEEEEEETTEEC--------------CEEEEEEEEEEHHHHHTCSCEEEEEEETTE
T ss_pred CCcEEEEEEECcccCCCeEEEEEECCEECcCceecCcccccCCcEEEEEEEEEeHHHccCCCeEEEEEEeCCC
Confidence 568999999987 4666 89999999877431 01 1255666666789999999999863
No 484
>3juy_B 3B3 single chain variant HIV-1 antibody; envelope protein GP120, broadly neutralizing antibody, 3B3 single chain variable fragment, immune system; 2.50A {Homo sapiens}
Probab=98.85 E-value=1.1e-08 Score=58.88 Aligned_cols=57 Identities=18% Similarity=0.370 Sum_probs=43.1
Q ss_pred CCccEEEEEEeccCCC-CeeEEeeC--CccCC------------CC---------CCCeEEEecCCCCCCeEEEEEEEcC
Q psy12725 1 MLALKFFTCKYEGNPV-KTISWMKD--GKPVP------------DH---------NEPVFRIDSVRKEDKGMYQCVIRNE 56 (119)
Q Consensus 1 ~g~~~~l~c~~~~~~~-~~v~w~~~--~~~~~------------~~---------~~~~l~~~~~~~~d~g~y~C~~~~~ 56 (119)
.|+.|+|.|.+.+.+. +.+.|||. +..+. .. ....|.|.+++.+|+|.|.|.+.+.
T Consensus 163 ~G~~v~L~C~~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~DsG~Y~C~~~~~ 242 (256)
T 3juy_B 163 PGERATFSCRSSHSIRSRRVAWYQHKPGQAPRLVIHGVSNRASGISDRFSGSGSGTDFTLTITRVEPEDFALYYCQVYGA 242 (256)
T ss_dssp TTSCEEEEEEESSCCTTCCEEEEEECTTSCCEEEEETTTEECTTCCTTEEEEEETTEEEEEESSCCGGGCSEEEEEECCS
T ss_pred CCCCEEEEEEECCCcCCeeEEEEEECCCCCcEEEEEecCccCCccCCcEEEEccCCEEEEEECCCCHhHCEEEEEEEeeC
Confidence 4899999999988765 89999983 22211 00 1235999999999999999999875
Q ss_pred C
Q psy12725 57 Q 57 (119)
Q Consensus 57 ~ 57 (119)
.
T Consensus 243 ~ 243 (256)
T 3juy_B 243 S 243 (256)
T ss_dssp S
T ss_pred C
Confidence 3
No 485
>1j05_L T84.66 antibody, anti-CEA MAB T84.66, light chain; immunoglobulin, immune system; 1.50A {Mus musculus} SCOP: b.1.1.1 PDB: 1qfw_L* 1qnz_L 3iy3_A 3iy4_A
Probab=98.85 E-value=3.2e-09 Score=53.80 Aligned_cols=56 Identities=21% Similarity=0.369 Sum_probs=41.8
Q ss_pred CCccEEEEEEeccCC----CCeeEEeeCC--ccC----C--------CC---------CCCeEEEecCCCCCCeEEEEEE
Q psy12725 1 MLALKFFTCKYEGNP----VKTISWMKDG--KPV----P--------DH---------NEPVFRIDSVRKEDKGMYQCVI 53 (119)
Q Consensus 1 ~g~~~~l~c~~~~~~----~~~v~w~~~~--~~~----~--------~~---------~~~~l~~~~~~~~d~g~y~C~~ 53 (119)
.|+.|+|.|.+.+.+ .+.+.|||.. ... . .. ....|.|.+++.+|+|.|.|.+
T Consensus 15 ~G~~v~L~C~~~~~~~~~~~~~v~W~r~~~g~~~~~l~~~~~~~~~~~~~R~~~~~~~~~~~L~I~~v~~~DsG~Y~C~~ 94 (111)
T 1j05_L 15 LGQRATMSCRAGESVDIFGVGFLHWYQQKPGQPPKLLIYRASNLESGIPVRFSGTGSRTDFTLIIDPVEADDVATYYCQQ 94 (111)
T ss_dssp TTSCEEEEEEESSCCEETTEECEEEEEECTTSCEEEEEETTTEECTTSCTTEEEEEETTEEEEEESSCCGGGCEEEEEEE
T ss_pred CCCCEEEEeecCCCcccCCCceEEEEEeCCCCCCEEEEEecCcCCCCCCCcEEEEccCCEEEEEECCCCcccCEEEEEEE
Confidence 489999999998765 4679999853 211 0 00 1236999999999999999999
Q ss_pred EcC
Q psy12725 54 RNE 56 (119)
Q Consensus 54 ~~~ 56 (119)
.+.
T Consensus 95 ~~~ 97 (111)
T 1j05_L 95 TNE 97 (111)
T ss_dssp CSS
T ss_pred ecC
Confidence 864
No 486
>2ak4_D SB27 T cell receptor alpha chain; bulged epitopes, PMHC/TCR complex, immune system; 2.50A {Homo sapiens} SCOP: b.1.1.1 b.1.1.2 PDB: 3kxf_D 3nfj_I 3ffc_D
Probab=98.84 E-value=4.2e-08 Score=55.25 Aligned_cols=101 Identities=13% Similarity=0.179 Sum_probs=60.8
Q ss_pred CCccEEEEEEeccCCCC-eeEEeeCC--ccCC-------------C-----------CCCCeEEEecCCCCCCeEEEEEE
Q psy12725 1 MLALKFFTCKYEGNPVK-TISWMKDG--KPVP-------------D-----------HNEPVFRIDSVRKEDKGMYQCVI 53 (119)
Q Consensus 1 ~g~~~~l~c~~~~~~~~-~v~w~~~~--~~~~-------------~-----------~~~~~l~~~~~~~~d~g~y~C~~ 53 (119)
.|+.|+|.|.+.+.... .+.|||.. ..+. . .....|.|.+++.+|.|.|.|.+
T Consensus 17 ~G~~vtL~C~~s~~~~~~~v~Wyrq~~g~~~~~l~~~~~~~~~~~~~~Rf~~~~~~~~~~~~L~I~~~~~~Dsg~Y~C~~ 96 (211)
T 2ak4_D 17 EKEDVTLDCVYETRDTTYYLFWYKQPPSGELVFLIRRNSFDEQNEISGRYSWNFQKSTSSFNFTITASQVVDSAVYFCAL 96 (211)
T ss_dssp TTCCEEECCEEECSCSSCEEEEEEECTTCCCEEEEEEETTSCSEEEETTEEEEEETTTTEEEEEESSCCGGGCEEEEEEE
T ss_pred cCCCEEEEEEecCCcCceeEEEEEECCCCccEEEEEECCCcCccCcCCCEEEEEcCCCCEEEEEECccccccCceEEEEE
Confidence 48999999999764434 79999732 1110 0 01247899999999999999999
Q ss_pred EcCC--C--CceeEeeEEEeeec--CCCeeeecCCccccCCCCcEEEEeEEccC-CCCeE
Q psy12725 54 RNEQ--E--SAQASGELKLGGRF--DPPVIKESFSDETLNPGPNYYFKCIASGN-PTPEI 106 (119)
Q Consensus 54 ~~~~--~--~~~~~~~~~v~~~~--~~~~~~~~~~~~~~~~g~~~~l~C~~~~~-p~~~~ 106 (119)
.+.. . .......+.|.... ..|.+..... ....+.|.|.+.+. |.+.+
T Consensus 97 ~~~~~~~~~~~g~gt~L~V~~~~~~~~P~V~~~~~-----~~~~vtL~Cl~~gf~P~~~v 151 (211)
T 2ak4_D 97 SGFYNTDKLIFGTGTRLQVFPNIQNPDPAVYQLRD-----SKSSDKSVCLFTDFDSQTNV 151 (211)
T ss_dssp ECSBTTSCCEECCCEEEEEECCCSSCCCEEEEEBC-----CSSSCCEEEEEESCCTTCCC
T ss_pred EcCCCcceeeECCCEEEEEeCcCCCCCCEEEEccC-----CCCceEEEEEeeeecCCccc
Confidence 8642 1 11122345444321 2344333221 12378999998774 55544
No 487
>3bkj_L WO2 IGG2A FAB fragment light chain kappa; abeta, FAB, WO2, alzheimer'S disease, immunotherapies, APP, immune system; 1.59A {Mus musculus} PDB: 3bkc_L 3bkm_L 2zuq_B* 1h3p_L
Probab=98.84 E-value=5.2e-09 Score=60.07 Aligned_cols=58 Identities=14% Similarity=0.318 Sum_probs=44.1
Q ss_pred CccEEEEEEeccC-CCC-eeEEeeCCccCCCC----------CC------CeEEEecCCCCCCeEEEEEEEcCCCC
Q psy12725 2 LALKFFTCKYEGN-PVK-TISWMKDGKPVPDH----------NE------PVFRIDSVRKEDKGMYQCVIRNEQES 59 (119)
Q Consensus 2 g~~~~l~c~~~~~-~~~-~v~w~~~~~~~~~~----------~~------~~l~~~~~~~~d~g~y~C~~~~~~~~ 59 (119)
|+.++|.|.+.+. |.+ .|.|++++..+... .. ..|.|..+..+|.|.|+|.+.|....
T Consensus 165 g~~v~L~C~~~g~~p~~~~v~W~k~g~~~~~~~~~~~~~~~~~~g~~~~~s~L~i~~~~~~d~g~Y~C~a~n~~~~ 240 (252)
T 3bkj_L 165 SGGASVVCFLNNFYPKDINVKWKIDGSERQNGVLNSWTDQDSKDSTYSMSSTLTLTKDEYERHNSYTCEATHKTST 240 (252)
T ss_dssp HTEEEEEEEEEEEBSSCCEEEEEETTEEECSSEEEEECCCCTTTCCEEEEEEEEEEHHHHHHCCEEEEEEECTTCS
T ss_pred CCcEEEEEEEeeEeCCCcEEEEEECCeecCCCeeeecCcccCCCCCEEEEEEEEEcchhccCCCeEEEEEEeCCCC
Confidence 6789999999874 543 79999998765322 11 23788888888999999999997644
No 488
>3tv3_L PGT128 light chain, IG lambda-2 chain C regions; FAB, HIV-1 neutralizing antibody, GP120, immune system; HET: PCA MAN GOL EPE; 1.29A {Homo sapiens} PDB: 3tyg_L* 3twc_L* 3tnm_L 2mcg_1 1mcw_M 1a8j_L 3mcg_1 1dcl_A 1mcb_A* 1mcc_A* 1mcd_A* 1mce_A* 1mcf_A* 1mch_A 1mci_A* 1mcj_A* 1mck_A 1mcl_A* 1mcn_A* 1mcq_A ...
Probab=98.83 E-value=8.5e-10 Score=61.64 Aligned_cols=57 Identities=16% Similarity=0.344 Sum_probs=43.7
Q ss_pred CccEEEEEEeccC--CCCeeEEeeCCccCCCC---------CC------CeEEEecCCCCCCeEEEEEEEcCCC
Q psy12725 2 LALKFFTCKYEGN--PVKTISWMKDGKPVPDH---------NE------PVFRIDSVRKEDKGMYQCVIRNEQE 58 (119)
Q Consensus 2 g~~~~l~c~~~~~--~~~~v~w~~~~~~~~~~---------~~------~~l~~~~~~~~d~g~y~C~~~~~~~ 58 (119)
|+.+.|.|.+.+. +.+.+.|++++..+... .. ..|.|..+...|.|.|+|.+.+..+
T Consensus 126 g~~v~l~C~~~g~~p~~~~v~W~k~g~~l~~~~~~~~~~~~~~~~~~~~s~L~i~~~~~~d~g~Y~C~v~~~~~ 199 (211)
T 3tv3_L 126 ANKATLVCLISDFYPGAVTVAWKADSSPVKAGVETTTPSKQSNNKYAASSYLSLTPEQWKSHRSYSCQVTHEGS 199 (211)
T ss_dssp TTCEEEEEEEEEEBSSCCEEEEEETTEEECTTEEECCCEECTTSSEEEEEEEEECHHHHHHSSCEEEEEEETTE
T ss_pred CCCeEEEEEeeeecCCCeEEEEEECCeecCCCcccCCceECCCCCEEEEEEEEEcHHHhCCCCeEEEEEEECCC
Confidence 7899999999875 35789999999876431 11 3466766777789999999999863
No 489
>3bqu_C 3H6 FAB light chain; beta sheet, immune system; 3.00A {Mus musculus}
Probab=98.82 E-value=1.3e-09 Score=61.71 Aligned_cols=57 Identities=14% Similarity=0.314 Sum_probs=38.9
Q ss_pred CccEEEEEEeccC-CCC-eeEEeeCCccCCCC----------CC------CeEEEecCCCCCCeEEEEEEEcCCC
Q psy12725 2 LALKFFTCKYEGN-PVK-TISWMKDGKPVPDH----------NE------PVFRIDSVRKEDKGMYQCVIRNEQE 58 (119)
Q Consensus 2 g~~~~l~c~~~~~-~~~-~v~w~~~~~~~~~~----------~~------~~l~~~~~~~~d~g~y~C~~~~~~~ 58 (119)
|+.++|.|.+.+. |.+ .+.|++++..+... .. ..|.|.....+|.|.|+|.+.|...
T Consensus 149 g~~v~L~C~~~g~~p~~~~v~W~k~g~~~~~~~~~~~~~~~~~~~~~~~~s~L~i~~~~~~d~g~Y~C~a~n~~~ 223 (233)
T 3bqu_C 149 SGGASVVCFLNNFYPKDINVKWKIDGSERQNGVLNSWTDQDSKDSTYSMSSTLTLTKDEYERHNSYTCEATHKTS 223 (233)
T ss_dssp TTEEEEEEEEEEEBSSCEEEEEEEC-----CCEEEEECCCCTTTCCEEEEEEEEEEHHHHHTCCCEEEEEEEC--
T ss_pred CCceEEEEEEccccCCceEEEEEECCeeCCCCceEecCCccCCCCCEEEEEEEEECHHHhCCCCCEEEEEEeCCC
Confidence 7889999999875 443 79999998765322 11 2467777778899999999998753
No 490
>2yc1_B Single chain antibody fragment 9004G; immune system-toxin complex, scorpion toxin; 1.90A {Homo sapiens} PDB: 2ybr_B 3lh2_L 3h3p_L 3lhp_L
Probab=98.82 E-value=2.9e-08 Score=52.81 Aligned_cols=56 Identities=16% Similarity=0.315 Sum_probs=42.3
Q ss_pred CCccEEEEEEeccCCCCeeEEeeCC--cc---C-CC--------C---------CCCeEEEecCCCCCCeEEEEEEEcC
Q psy12725 1 MLALKFFTCKYEGNPVKTISWMKDG--KP---V-PD--------H---------NEPVFRIDSVRKEDKGMYQCVIRNE 56 (119)
Q Consensus 1 ~g~~~~l~c~~~~~~~~~v~w~~~~--~~---~-~~--------~---------~~~~l~~~~~~~~d~g~y~C~~~~~ 56 (119)
.|+.|+|.|.+.+.+.+.+.|||.. .. + .. . ....|.|.+++.+|+|.|+|.+.+.
T Consensus 30 ~G~sVtL~C~~s~~~~~~v~Wyrq~~g~~~~~li~~~~~~~~~~~~Rfs~~~~~~~~sL~I~~v~~~DsG~Y~C~~~~~ 108 (146)
T 2yc1_B 30 PGERATLSCRASQSVRSYLAWYQQKPGQAPRLLFSDASNRATGIPARFTGSGSGTDFTLTISSLEPEDFAIYYCQQYRY 108 (146)
T ss_dssp TTSCEEEEEEESSCCTTCEEEEEECTTSCCEEEEETTTEECTTCCTTEEEEEETTEEEEEESSCCGGGCSEEEEEECSS
T ss_pred cCCCEEEEEEECCCCCCEEEEEEECCCCCCEEEEEeCCccCCCcCCCeEEecCCCEEEEEECCCCHHHCEEEEEEEecC
Confidence 4899999999987666789999843 11 1 00 0 1236899999999999999999875
No 491
>3d9a_H Heavy chain of hyhel10 antibody fragment (FAB); lysozyme, antigen, allergen, antimic bacteriolytic enzyme, glycosidase, hydrolase; 1.20A {Mus musculus} PDB: 3hfm_H 1gpo_H 3ks0_H* 1dqd_H 1ndm_B 1nak_H 1dqq_B 1dqm_H 1dqj_B 1nby_B 1nbz_B 1xgu_B 1ndg_B 1xgt_B 1xgp_B 1xgq_B 1xgr_B 1s5i_H 1f8t_H 1f90_H ...
Probab=98.82 E-value=4.4e-09 Score=58.75 Aligned_cols=58 Identities=16% Similarity=0.285 Sum_probs=43.8
Q ss_pred CccEEEEEEeccC-CCC-eeEEeeCCccCCCC-------C-----CCeEEEecCCCCCCeEEEEEEEcCCCCc
Q psy12725 2 LALKFFTCKYEGN-PVK-TISWMKDGKPVPDH-------N-----EPVFRIDSVRKEDKGMYQCVIRNEQESA 60 (119)
Q Consensus 2 g~~~~l~c~~~~~-~~~-~v~w~~~~~~~~~~-------~-----~~~l~~~~~~~~d~g~y~C~~~~~~~~~ 60 (119)
|+.+.|.|.+.+. |.+ .+.|++++..+... . ...|.|......| |.|+|.+.|..+..
T Consensus 133 g~~v~L~C~~~g~~P~p~~v~W~~~~~~~~~~~~~~~~~~~~~~~~s~L~i~~~~~~~-g~Y~C~a~n~~~~~ 204 (210)
T 3d9a_H 133 NSMVTLGCLVKGYFPEPVTVTWNSGSLSSGVHTFPAVLQSDLYTLSSSVTVPSSTWPS-ETVTCNVAHPASST 204 (210)
T ss_dssp SSEEEEEEEEEEEBSSCCEEEEGGGTBCTTEEECCCEEETTEEEEEEEEEEEGGGTTT-SCCEEEEEEGGGTE
T ss_pred CCcEEEEEEEeeEecCCcEEEEeeCCcccceEEcCCccCCCcEEEEEEEEEcHHHcCC-CcEEEEEEeCCCCc
Confidence 7899999999886 777 99999988753210 0 1347777777766 99999999986544
No 492
>1dee_B IGM RF 2A2; FAB-IBP complex 2.7A resolution binding outside the antigen combining site superantigen FAB VH3 specificity; 2.70A {Homo sapiens} SCOP: b.1.1.1 b.1.1.2 PDB: 1hez_B 1adq_H
Probab=98.82 E-value=2.4e-08 Score=56.38 Aligned_cols=60 Identities=12% Similarity=0.205 Sum_probs=44.2
Q ss_pred CccEEEEEEeccC-CCC-eeEEee-CCccCCC--------CC-----CCeEEEecCCC--CCCeEEEEEEEcCCCCce
Q psy12725 2 LALKFFTCKYEGN-PVK-TISWMK-DGKPVPD--------HN-----EPVFRIDSVRK--EDKGMYQCVIRNEQESAQ 61 (119)
Q Consensus 2 g~~~~l~c~~~~~-~~~-~v~w~~-~~~~~~~--------~~-----~~~l~~~~~~~--~d~g~y~C~~~~~~~~~~ 61 (119)
|+.++|.|.+.+. |.+ .+.|++ ++..+.. .. .+.|.+..... .|.|.|+|.+.|..+...
T Consensus 141 g~~v~L~C~~~g~~P~p~~v~W~~~~g~~l~~~~~~~~~~~~~~~~~~s~L~i~~~~~~~~d~g~y~C~v~n~~~~~~ 218 (223)
T 1dee_B 141 SSTVAVGCLAQDFLPDSITFSWKYKNNSDISSTRGFPSVLRGGKYAATSQVLLPSKDVAQGTNEHVVCKVQHPNGNKE 218 (223)
T ss_dssp SSEEEEEEEEEEEBSSCCEEEEEETTSCBCSCEEECCCEEETTEEEEEEEEEEECTTTTSTTCCEEEEEEECTTCCEE
T ss_pred CCcEEEEEEEEEEeCCCeEEEeEccCCCccceeEECCccccCCeEEEEEEEEEcHHHhccCCCCEEEEEEEeCCCCCc
Confidence 7889999999876 766 999999 8877642 01 12356655555 678999999999875543
No 493
>2v5y_A Receptor-type tyrosine-protein phosphatase MU; membrane, hydrolase, glycoprotein, receptor protei tyrosine phosphatase, cell adhesion; HET: NAG; 3.10A {Homo sapiens}
Probab=98.82 E-value=1.4e-08 Score=66.34 Aligned_cols=94 Identities=23% Similarity=0.323 Sum_probs=62.6
Q ss_pred CCccEEEEEEeccCCCCeeE-Ee--eCCccCCCC---------CCCeEEEecCCCCCCeEEEEEEEcCCCC-ceeEeeEE
Q psy12725 1 MLALKFFTCKYEGNPVKTIS-WM--KDGKPVPDH---------NEPVFRIDSVRKEDKGMYQCVIRNEQES-AQASGELK 67 (119)
Q Consensus 1 ~g~~~~l~c~~~~~~~~~v~-w~--~~~~~~~~~---------~~~~l~~~~~~~~d~g~y~C~~~~~~~~-~~~~~~~~ 67 (119)
.|+.+.|.|.+.+.|.+.+. |+ +++..+... ....|.|.++...|.|.|.|.+.|..+. ......+.
T Consensus 178 ~G~~v~l~C~~~g~P~p~i~~W~~~~~g~~l~~~~~~~~~~~~~~~~l~I~~~~~~d~g~Y~c~A~n~~G~~~s~~~~l~ 257 (731)
T 2v5y_A 178 AGQFATFQCSAIGRTVAGDRLWLQGIDVRDAPLKEIKVTSSRRFIASFNVVNTTKRDAGKYRCMIRTEGGVGISNYAELV 257 (731)
T ss_dssp TTSCEEEEEEEESCCCTTCEEEEEESSSCCEEEEEEEECCSSEEEEEEEECSCCTTTCEEEEEEEEETTEEEECCCEEEE
T ss_pred CCCcEEEEEEeCCCCCCceeEEEecCCCccccccceEEeccccceEEEEEcccccccCeEEEEEEECCCCCcceeeEEEE
Confidence 48899999999999998888 77 677654221 1257999999999999999999998765 33344455
Q ss_pred EeeecCCCeeeecCCccccCCCCcEEEEeEE
Q psy12725 68 LGGRFDPPVIKESFSDETLNPGPNYYFKCIA 98 (119)
Q Consensus 68 v~~~~~~~~~~~~~~~~~~~~g~~~~l~C~~ 98 (119)
+.. +|.+...+... ......+.+.|..
T Consensus 258 V~~---~P~~~~~p~~~-~~~~~~v~l~w~~ 284 (731)
T 2v5y_A 258 VKE---PPVPIAPPQLA-SVGATYLWIQLNA 284 (731)
T ss_dssp EEC---CCCBSSCCEEE-EECSSCEEEECCC
T ss_pred Eec---CCCCCCCccee-ccCCceEEEEeCC
Confidence 432 33322222111 1234567777764
No 494
>2z35_A T-cell receptor alpha-chain; immune receptor, immune system; 2.20A {Mus musculus} PDB: 2pxy_A 2z31_A 1ac6_A
Probab=98.82 E-value=2.5e-08 Score=50.56 Aligned_cols=54 Identities=15% Similarity=0.346 Sum_probs=41.2
Q ss_pred CCccEEEEEEeccCCCCeeEEeeCC--cc---C--------------------CCCCCCeEEEecCCCCCCeEEEEEEE
Q psy12725 1 MLALKFFTCKYEGNPVKTISWMKDG--KP---V--------------------PDHNEPVFRIDSVRKEDKGMYQCVIR 54 (119)
Q Consensus 1 ~g~~~~l~c~~~~~~~~~v~w~~~~--~~---~--------------------~~~~~~~l~~~~~~~~d~g~y~C~~~ 54 (119)
.|+.|+|.|.+.+.+...+.|||.. .. + .......|.|.+++.+|+|.|.|.+.
T Consensus 14 ~G~~v~L~C~~~~~~~~~v~W~rq~~~~~~~~l~~~~~~~~~~~~~r~~~~~~~~~~~~~L~I~~~~~~DsG~Y~C~~~ 92 (112)
T 2z35_A 14 EEDFLTIHCNYSASGYPALFWYVQYPGEGPQFLFRASRDKEKGSSRGFEATYNKEATSFHLQKASVQESDSAVYYCALS 92 (112)
T ss_dssp TTCCEEECCEEECSSCCEEEEEEECTTSCCEEEEEECSTTCEEEETTEEEECBTTTTBCCEEESSCCSTTCSEEEEEEE
T ss_pred CCCCEEEEEEECCCCCCeEEEEEECCCCCcEEeEEEecccCCccCCCEEEEEcCCCCEEEEEECCCChhhCEEEEEEEE
Confidence 4899999999977666789999842 11 0 00123579999999999999999998
No 495
>3bia_X T-cell immunoglobulin and mucin domain- containing protein 4; beta barrel, immunoglobulin fold, IGV domain, TIM, glycoprotein; HET: TLA; 2.20A {Mus musculus} PDB: 3bi9_X* 3bib_X*
Probab=98.81 E-value=4.8e-08 Score=49.82 Aligned_cols=56 Identities=21% Similarity=0.409 Sum_probs=40.8
Q ss_pred CCccEEEEEEecc-C-CCCeeEEeeCC----ccCC------C------------------CCCCeEEEecCCCCCCeEEE
Q psy12725 1 MLALKFFTCKYEG-N-PVKTISWMKDG----KPVP------D------------------HNEPVFRIDSVRKEDKGMYQ 50 (119)
Q Consensus 1 ~g~~~~l~c~~~~-~-~~~~v~w~~~~----~~~~------~------------------~~~~~l~~~~~~~~d~g~y~ 50 (119)
.|+.|+|.|.... . ....+.||+.. .... . ....+|.|.+++.+|+|.|.
T Consensus 10 ~G~~vtL~C~~~~~~~~~~~v~W~r~~~~~~~~~~~l~~~~~~~~~~~~~~r~~~~~~~~~~~~sL~I~~v~~~Dsg~Y~ 89 (116)
T 3bia_X 10 LGQPVTLPCHYLSWSQSRNSMCWGKGSCPNSKCNAELLRTDGTRIISRKSTKYTLLGKVQFGEVSLTISNTNRGDSGVYC 89 (116)
T ss_dssp TTSCEEECCBCTTCCTTTCEEEEEESSCCSSSCTTEEEEECSSSEEEESSTTEEECSCGGGTBCCEEECSCCGGGCEEEE
T ss_pred eCCcEEEEEEeeCCCCCeEEEEEeeecCCCCCCceEEEEECCcccccccCceEEEeccCCCCEEEEEEccCChhHCEEEE
Confidence 4899999999862 2 33469999865 2110 0 02257999999999999999
Q ss_pred EEEEcC
Q psy12725 51 CVIRNE 56 (119)
Q Consensus 51 C~~~~~ 56 (119)
|.+...
T Consensus 90 C~v~~~ 95 (116)
T 3bia_X 90 CRIEVP 95 (116)
T ss_dssp EEEECS
T ss_pred EEEEcC
Confidence 999864
No 496
>3m8o_H Immunoglobulin A1 heavy chain; immunoglobulin fold, immune system; 1.55A {Homo sapiens} PDB: 3qnx_B 3qny_B
Probab=98.80 E-value=3.4e-08 Score=55.61 Aligned_cols=58 Identities=12% Similarity=0.296 Sum_probs=44.4
Q ss_pred CCccEEEEEEecc-CCC--CeeEEeeCCccCC---------CCCC-----CeEEEecCCCCCCeEEEEEEEcCCC
Q psy12725 1 MLALKFFTCKYEG-NPV--KTISWMKDGKPVP---------DHNE-----PVFRIDSVRKEDKGMYQCVIRNEQE 58 (119)
Q Consensus 1 ~g~~~~l~c~~~~-~~~--~~v~w~~~~~~~~---------~~~~-----~~l~~~~~~~~d~g~y~C~~~~~~~ 58 (119)
.|+.++|.|.+.+ .|. +.+.|++++..+. .... +.|.|......|.|.|+|.+.+..+
T Consensus 137 ~g~~v~L~C~~~~~~P~~~~~v~W~~~g~~~~~~~~~~~~~~~~~~~~~~s~L~i~~~~~~d~g~ytC~v~~~~~ 211 (221)
T 3m8o_H 137 PDGNVVIACLVQGFFPQEPLSVTWSESGQGVTARNFPPSQDASGDLYTTSSQLTLPATQCLAGKSVTCHVKHYTN 211 (221)
T ss_dssp CTTEEEEEEEEEEEBSSCSEEEEESCCSTTCEEEECCCEECSSSSCEEEEEEEEEEGGGSCTTCEEEEEEEETTS
T ss_pred cCCCEEEEEEEEeeECCCCEEEEEEECCEECceEEcCceeeCCCCcEEEEEEEEECHHHcCCCCeEEEEEEECCC
Confidence 3789999999988 565 4899999987652 1111 2477888888899999999999764
No 497
>1n26_A IL-6 receptor alpha chain; transmembrane, glycoprotein, immunoglobulin domain, cytokine; HET: NAG BMA MAN NDG; 2.40A {Homo sapiens} SCOP: b.1.1.4 b.1.2.1 b.1.2.1 PDB: 1p9m_C 2arw_A
Probab=98.80 E-value=2.8e-08 Score=59.17 Aligned_cols=66 Identities=18% Similarity=0.218 Sum_probs=49.1
Q ss_pred CCccEEEEEEeccCC-CCeeEEeeCCccCCCC------CCCeEEEecCCCCCCeEEEEEEEcCCCCceeEeeEEEe
Q psy12725 1 MLALKFFTCKYEGNP-VKTISWMKDGKPVPDH------NEPVFRIDSVRKEDKGMYQCVIRNEQESAQASGELKLG 69 (119)
Q Consensus 1 ~g~~~~l~c~~~~~~-~~~v~w~~~~~~~~~~------~~~~l~~~~~~~~d~g~y~C~~~~~~~~~~~~~~~~v~ 69 (119)
.|+.|+|.|.+.+.+ .+.|.|++++..+... ....|.|.+++..|.|.|.|.. .+.......+.+.
T Consensus 20 ~G~~v~l~C~~~~~~~~~~i~W~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~~---~g~~~~~~~L~V~ 92 (325)
T 1n26_A 20 PGDSVTLTCPGVEPEDNATVHWVLRKPAAGSHPSRWAGMGRRLLLRSVQLHDSGNYSCYR---AGRPAGTVHLLVD 92 (325)
T ss_dssp TTCCEEEECTTSCTTCCSEEEEEEECSSSSCCCEEEEEESSEEEECSCCGGGCEEEEEES---SSSCSCEEEEEEC
T ss_pred CCCcEEEEeCCCCCCCCceEEEEECCccCCccccccccccceEEecccchhhCeEeEEEe---CCEEeeeEEEEec
Confidence 489999999988654 6799999987654221 2467999999999999999992 3444445555554
No 498
>2or7_A T-cell immunoglobulin and mucin domain- containing protein 2; beta barrel, immunoglobulin fold, IGV domain, TIM, immune system; 1.50A {Mus musculus}
Probab=98.79 E-value=1.5e-08 Score=51.64 Aligned_cols=68 Identities=15% Similarity=0.196 Sum_probs=46.3
Q ss_pred CCccEEEEEEeccC--CCCeeEEeeCCc-------cC--------C--C-----------CCCCeEEEecCCCCCCeEEE
Q psy12725 1 MLALKFFTCKYEGN--PVKTISWMKDGK-------PV--------P--D-----------HNEPVFRIDSVRKEDKGMYQ 50 (119)
Q Consensus 1 ~g~~~~l~c~~~~~--~~~~v~w~~~~~-------~~--------~--~-----------~~~~~l~~~~~~~~d~g~y~ 50 (119)
.|+.|+|.|..... ....+.|+|... .+ . . ....+|.|.+++.+|+|.|.
T Consensus 11 ~G~~v~L~C~~~~~~~~~~~v~W~~~~~~~~~~~~~~i~~~~~~~~~~~~~r~~~~~~~~~~~~sL~I~~v~~~DsG~Y~ 90 (115)
T 2or7_A 11 AGHPVTLPCIYSTHLGGIVPMCWGLGECRHSYCIRSLIWTNGYTVTHQRNSRYQLKGNISEGNVSLTIENTVVGDGGPYC 90 (115)
T ss_dssp TTSCEEECCBCCHHHHCSCCEEEEESCHHHHTTTTEEEEECSSSEEEESSTTEECCSCGGGTBCCEEESSCCGGGCEEEE
T ss_pred cCCCEEEEEEeecCCCCCEEEEEECCCCCcCCCceEEEEeCCeEcccccCccEEEecCccCCeEEEEEccCCHHHCEEEE
Confidence 48999999998643 345799998641 00 0 0 12357999999999999999
Q ss_pred EEEEcCCCCceeEeeEEEee
Q psy12725 51 CVIRNEQESAQASGELKLGG 70 (119)
Q Consensus 51 C~~~~~~~~~~~~~~~~v~~ 70 (119)
|.+....... ...+.+.+
T Consensus 91 C~v~~~~~~~--~~~v~L~V 108 (115)
T 2or7_A 91 CVVEIPGAFH--FVDYMLEV 108 (115)
T ss_dssp EEECCTTSCE--EEEEEEEE
T ss_pred EEEECCCcee--EEEEEEEE
Confidence 9998764333 33444433
No 499
>1moe_A Anti-CEA MAB T84.66; anti carcinoembryonic antigen, diabody, dimer, SCFV, variable domain, immune system; 2.60A {Mus musculus} SCOP: b.1.1.1 b.1.1.1
Probab=98.79 E-value=3e-08 Score=56.38 Aligned_cols=56 Identities=20% Similarity=0.330 Sum_probs=42.2
Q ss_pred CCccEEEEEEeccCC--CCeeEEeeC--CccCC-------------------C---------CCCCeEEEecCCCCCCeE
Q psy12725 1 MLALKFFTCKYEGNP--VKTISWMKD--GKPVP-------------------D---------HNEPVFRIDSVRKEDKGM 48 (119)
Q Consensus 1 ~g~~~~l~c~~~~~~--~~~v~w~~~--~~~~~-------------------~---------~~~~~l~~~~~~~~d~g~ 48 (119)
.|+.++|.|.+.+.+ .+.+.|+|+ +..+. . .....|.|.+++.+|.|.
T Consensus 133 ~G~~v~L~C~~~g~p~~~~~v~W~k~~~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~I~~v~~~D~G~ 212 (240)
T 1moe_A 133 PGASVKLSCTASGFNIKDTYMHWVKQRPEQGLEWIGRIDPANGNSKYVPKFQGKATITADTSSNTAYLQLTSLTSEDTAV 212 (240)
T ss_dssp TTCCEEEEEEEESSCGGGSCEEEEEECTTSCCEEEEEEETTTTEEEECGGGTTTEEEEEETTTTEEEEEECSCCGGGCEE
T ss_pred CCCcEEEEEEEcCccCCCCEEEEEEECCCCCcEEEEEEcccCCccccCccccccEEEEEcccCCEEEEEECcCCHHHCEE
Confidence 389999999998876 458999995 22110 0 112469999999999999
Q ss_pred EEEEEEcC
Q psy12725 49 YQCVIRNE 56 (119)
Q Consensus 49 y~C~~~~~ 56 (119)
|.|.+.+.
T Consensus 213 Y~C~a~~~ 220 (240)
T 1moe_A 213 YYCAPFGY 220 (240)
T ss_dssp EEEEECST
T ss_pred EEEEEEec
Confidence 99999853
No 500
>1eeq_A Kappa-4 immunoglobulin (light chain); protein stability, hydrogen bonds, immune system; 1.50A {Homo sapiens} SCOP: b.1.1.1 PDB: 1eeu_A 1lve_A 2lve_A 3lve_A 5lve_A 4lve_A 1efq_A 1qac_A 1ek3_A 2imm_A 1mvu_A 2ap2_A 1ap2_A 3bd3_A* 3bd4_A* 3bd5_A* 2imn_A 3dus_A* 3duu_A* 3dv4_A* ...
Probab=98.79 E-value=9.5e-09 Score=52.32 Aligned_cols=56 Identities=18% Similarity=0.335 Sum_probs=41.5
Q ss_pred CCccEEEEEEeccCC------CCeeEEeeCC--ccCC------------CC---------CCCeEEEecCCCCCCeEEEE
Q psy12725 1 MLALKFFTCKYEGNP------VKTISWMKDG--KPVP------------DH---------NEPVFRIDSVRKEDKGMYQC 51 (119)
Q Consensus 1 ~g~~~~l~c~~~~~~------~~~v~w~~~~--~~~~------------~~---------~~~~l~~~~~~~~d~g~y~C 51 (119)
.|+.|+|.|.+.+.+ .+.+.|||.. .... .. ....|.|.+++.+|+|.|.|
T Consensus 15 ~G~~v~L~C~~~~~~~~~~~~~~~v~W~r~~~~~~~~~l~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~DsG~Y~C 94 (114)
T 1eeq_A 15 LGERATINCKSSQSVLDSSNSKNYLAWYQQKPGQPPKLLIYWASTRESGVPDRFSGSGSGTDFTLTISSLQAEDVAVYYC 94 (114)
T ss_dssp TTSCEEEEEEESSCCEETTTTEECEEEEEECTTSCCEEEEETTTEECTTCCTTEEEEEETTEEEEEESSCCGGGCEEEEE
T ss_pred CCCeEEEEEEcCCCccccccCCccEEEEEECCCCCCEEEEEecCccCCCCCCCEEEeecCCEEEEEECCCCcccCEEEEE
Confidence 489999999998765 2679999853 1110 00 12368999999999999999
Q ss_pred EEEcC
Q psy12725 52 VIRNE 56 (119)
Q Consensus 52 ~~~~~ 56 (119)
.+.+.
T Consensus 95 ~~~~~ 99 (114)
T 1eeq_A 95 QQYYS 99 (114)
T ss_dssp EECSS
T ss_pred EEeeC
Confidence 99864
Done!