RPS-BLAST 2.2.26 [Sep-21-2011]
Database: scop70_1_75
13,730 sequences; 2,407,596 total letters
Searching..................................................done
Query= psy12725
(119 letters)
>d3dara1 b.1.1.4 (A:153-249) Fibroblast growth factor receptor,
FGFR {Human (Homo sapiens), FGFR2a [TaxId: 9606]}
Length = 97
Score = 51.3 bits (122), Expect = 2e-10
Identities = 22/71 (30%), Positives = 31/71 (43%), Gaps = 10/71 (14%)
Query: 7 FTCKYEGNPVKTISWMKDGKPVP----------DHNEPVFRIDSVRKEDKGMYQCVIRNE 56
F C GNP+ T+ W+K+GK + ++SV DKG Y CV+ NE
Sbjct: 25 FRCPAGGNPMPTMRWLKNGKEFKQEHRIGGYKVRNQHWSLIMESVVPSDKGNYTCVVENE 84
Query: 57 QESAQASGELK 67
S + L
Sbjct: 85 YGSINHTYHLD 95
Score = 35.9 bits (82), Expect = 2e-04
Identities = 11/45 (24%), Positives = 17/45 (37%), Gaps = 1/45 (2%)
Query: 71 RFDPPVIKESFSDETLNPGPNYYFKCIASGNPTPEISWYLDGKKL 115
+ K + F+C A GNP P + W +GK+
Sbjct: 3 YWTNT-EKMEKRLHAVPAANTVKFRCPAGGNPMPTMRWLKNGKEF 46
>d2cqva1 b.1.1.4 (A:8-108) Telokin {Human (Homo sapiens) [TaxId:
9606]}
Length = 101
Score = 50.6 bits (120), Expect = 5e-10
Identities = 21/78 (26%), Positives = 30/78 (38%), Gaps = 9/78 (11%)
Query: 7 FTCKYEGNPVKTISWMKDGKPVP---------DHNEPVFRIDSVRKEDKGMYQCVIRNEQ 57
K G T +WMK K + N I + R+E G Y ++ N+
Sbjct: 20 LFGKVTGTQPITCTWMKFRKQIQESEHMKVENSENGSKLTILAARQEHCGCYTLLVENKL 79
Query: 58 ESAQASGELKLGGRFDPP 75
S QA L + + DPP
Sbjct: 80 GSRQAQVNLTVVDKPDPP 97
Score = 34.4 bits (78), Expect = 7e-04
Identities = 7/41 (17%), Positives = 15/41 (36%)
Query: 75 PVIKESFSDETLNPGPNYYFKCIASGNPTPEISWYLDGKKL 115
P I + D+ + G + +G +W K++
Sbjct: 1 PQIIQFPEDQKVRAGESVELFGKVTGTQPITCTWMKFRKQI 41
>d1biha4 b.1.1.4 (A:307-395) Hemolin {Moth (Hyalophora cecropia)
[TaxId: 7123]}
Length = 89
Score = 49.8 bits (118), Expect = 7e-10
Identities = 16/65 (24%), Positives = 23/65 (35%), Gaps = 4/65 (6%)
Query: 7 FTCKYEGNPVKTISWMKDGKPVPDHN----EPVFRIDSVRKEDKGMYQCVIRNEQESAQA 62
CK G P + W + KP+ + I V+ DKG Y C NE
Sbjct: 23 IPCKVTGLPAPNVVWSHNAKPLSGGRATVTDSGLVIKGVKNGDKGYYGCRATNEHGDKYF 82
Query: 63 SGELK 67
++
Sbjct: 83 ETLVQ 87
Score = 34.7 bits (79), Expect = 4e-04
Identities = 8/40 (20%), Positives = 15/40 (37%)
Query: 74 PPVIKESFSDETLNPGPNYYFKCIASGNPTPEISWYLDGK 113
P ++ + G + C +G P P + W + K
Sbjct: 3 PKYEQKPEKVIVVKQGQDVTIPCKVTGLPAPNVVWSHNAK 42
>d1cs6a3 b.1.1.4 (A:209-299) Axonin-1 {Chicken (Gallus gallus)
[TaxId: 9031]}
Length = 91
Score = 45.6 bits (107), Expect = 3e-08
Identities = 19/63 (30%), Positives = 26/63 (41%), Gaps = 3/63 (4%)
Query: 7 FTCKYEGNPVKTISWMKDGKPVPDH---NEPVFRIDSVRKEDKGMYQCVIRNEQESAQAS 63
C GNPV I W K +EP+ I +V ED+G Y+C N +
Sbjct: 25 LECFAFGNPVPQIKWRKLDGSQTSKWLSSEPLLHIQNVDFEDEGTYECEAENIKGRDTYQ 84
Query: 64 GEL 66
G +
Sbjct: 85 GRI 87
Score = 36.3 bits (83), Expect = 1e-04
Identities = 14/37 (37%), Positives = 17/37 (45%), Gaps = 1/37 (2%)
Query: 74 PPVIKESF-SDETLNPGPNYYFKCIASGNPTPEISWY 109
P IK F +D G +C A GNP P+I W
Sbjct: 4 APSIKAKFPADTYALTGQMVTLECFAFGNPVPQIKWR 40
>d1epfa2 b.1.1.4 (A:98-189) Neural cell adhesion molecule (NCAM)
{Rat (Rattus norvegicus) [TaxId: 10116]}
Length = 92
Score = 44.9 bits (105), Expect = 7e-08
Identities = 13/70 (18%), Positives = 25/70 (35%), Gaps = 8/70 (11%)
Query: 7 FTCKYEGNPVKTISWMKDGKPVPDHNE--------PVFRIDSVRKEDKGMYQCVIRNEQE 58
C + TI W G+ V + +I ++K D+G Y+C R
Sbjct: 21 IVCDVVSSLPPTIIWKHKGRDVILKKDVRFIVLSNNYLQIRGIKKTDEGTYRCEGRILAR 80
Query: 59 SAQASGELKL 68
++++
Sbjct: 81 GEINFKDIQV 90
Score = 31.8 bits (71), Expect = 0.005
Identities = 7/39 (17%), Positives = 14/39 (35%)
Query: 75 PVIKESFSDETLNPGPNYYFKCIASGNPTPEISWYLDGK 113
+ K + + + G + C + P I W G+
Sbjct: 2 LMFKNAPTPQEFKEGEDAVIVCDVVSSLPPTIIWKHKGR 40
>d1cs6a4 b.1.1.4 (A:300-388) Axonin-1 {Chicken (Gallus gallus)
[TaxId: 9031]}
Length = 89
Score = 44.5 bits (104), Expect = 9e-08
Identities = 22/66 (33%), Positives = 32/66 (48%), Gaps = 5/66 (7%)
Query: 7 FTCKYEGNPVKTISWMKDGKPVPDHNEPVF-----RIDSVRKEDKGMYQCVIRNEQESAQ 61
++C G P + W++DG+P+ N R + ED GMYQCV N+ +
Sbjct: 21 WSCVASGKPRPAVRWLRDGQPLASQNRIEVSGGELRFSKLVLEDSGMYQCVAENKHGTVY 80
Query: 62 ASGELK 67
AS EL
Sbjct: 81 ASAELT 86
Score = 34.5 bits (78), Expect = 5e-04
Identities = 10/35 (28%), Positives = 17/35 (48%)
Query: 75 PVIKESFSDETLNPGPNYYFKCIASGNPTPEISWY 109
P + +D + G + + C+ASG P P + W
Sbjct: 2 PDWLDVITDTEADIGSDLRWSCVASGKPRPAVRWL 36
>d1qz1a3 b.1.1.4 (A:190-289) Neural cell adhesion molecule (NCAM)
{Rat (Rattus norvegicus) [TaxId: 10116]}
Length = 100
Score = 44.1 bits (103), Expect = 1e-07
Identities = 22/72 (30%), Positives = 31/72 (43%), Gaps = 11/72 (15%)
Query: 7 FTCKYEGNPVKTISWMKDGKPVPDHNEP-----------VFRIDSVRKEDKGMYQCVIRN 55
C +G P T+SW KDG+P+ + E I +V K D+ Y C+ N
Sbjct: 25 LVCDADGFPEPTMSWTKDGEPIENEEEDDEKHIFSDDSSELTIRNVDKNDEAEYVCIAEN 84
Query: 56 EQESAQASGELK 67
+ AS LK
Sbjct: 85 KAGEQDASIHLK 96
Score = 38.7 bits (89), Expect = 2e-05
Identities = 15/41 (36%), Positives = 21/41 (51%), Gaps = 2/41 (4%)
Query: 74 PPVI--KESFSDETLNPGPNYYFKCIASGNPTPEISWYLDG 112
PP + ++S + T N G + C A G P P +SW DG
Sbjct: 3 PPTVQARQSIVNATANLGQSVTLVCDADGFPEPTMSWTKDG 43
>d1f97a2 b.1.1.4 (A:129-238) Junction adhesion molecule, JAM,
C-terminal domain {Mouse (Mus musculus) [TaxId: 10090]}
Length = 110
Score = 44.6 bits (104), Expect = 1e-07
Identities = 19/80 (23%), Positives = 27/80 (33%), Gaps = 18/80 (22%)
Query: 7 FTCK-YEGNPVKTISWMKDGKPVPDHNEPVFR-----------------IDSVRKEDKGM 48
TC ++G+P SW KDG + + R D V D G
Sbjct: 22 LTCSEHDGSPPSEYSWFKDGISMLTADAKKTRAFMNSSFTIDPKSGDLIFDPVTAFDSGE 81
Query: 49 YQCVIRNEQESAQASGELKL 68
Y C +N +A S +
Sbjct: 82 YYCQAQNGYGTAMRSEAAHM 101
Score = 34.6 bits (78), Expect = 6e-04
Identities = 12/47 (25%), Positives = 19/47 (40%), Gaps = 1/47 (2%)
Query: 74 PPVIKESFSDETLNPGPNYYFKCIAS-GNPTPEISWYLDGKKLVNAE 119
PP ++ G C G+P E SW+ DG ++ A+
Sbjct: 2 PPSKPTISVPSSVTIGNRAVLTCSEHDGSPPSEYSWFKDGISMLTAD 48
>d1tnna_ b.1.1.4 (A:) Titin {Human (Homo sapiens), different
modules [TaxId: 9606]}
Length = 91
Score = 43.3 bits (101), Expect = 2e-07
Identities = 19/70 (27%), Positives = 33/70 (47%), Gaps = 9/70 (12%)
Query: 7 FTCKYEGNPVKTISWMKDGKPVP---------DHNEPVFRIDSVRKEDKGMYQCVIRNEQ 57
F+C +G PV T++W++ G+ + + F I SV+ D+G Y V+ N +
Sbjct: 19 FSCDTDGEPVPTVTWLRKGQVLSTSARHQVTTTKYKSTFEISSVQASDEGNYSVVVENSE 78
Query: 58 ESAQASGELK 67
+A L
Sbjct: 79 GKQEAEFTLT 88
Score = 28.3 bits (62), Expect = 0.091
Identities = 8/28 (28%), Positives = 12/28 (42%)
Query: 82 SDETLNPGPNYYFKCIASGNPTPEISWY 109
T+ G + F C G P P ++W
Sbjct: 7 RSMTVYEGESARFSCDTDGEPVPTVTWL 34
>d2fdbp2 b.1.1.4 (P:2252-2360) Fibroblast growth factor receptor,
FGFR {Human (Homo sapiens), FGFR1 [TaxId: 9606]}
Length = 109
Score = 43.8 bits (102), Expect = 2e-07
Identities = 18/83 (21%), Positives = 24/83 (28%), Gaps = 22/83 (26%)
Query: 7 FTCKYEGNPVKTISWMKDGKPVP----------------------DHNEPVFRIDSVRKE 44
F CK + I W+K + D V I +V E
Sbjct: 25 FVCKVYSDAQPHIQWIKHVEKNGSKYGPDGLPYLKVLKAAGVNTTDKEIEVLYIRNVTFE 84
Query: 45 DKGMYQCVIRNEQESAQASGELK 67
D G Y C+ N + S L
Sbjct: 85 DAGEYTCLAGNSIGISFHSAWLT 107
Score = 38.4 bits (88), Expect = 3e-05
Identities = 8/43 (18%), Positives = 17/43 (39%), Gaps = 1/43 (2%)
Query: 74 PPVIKESF-SDETLNPGPNYYFKCIASGNPTPEISWYLDGKKL 115
P+++ ++ + G + F C + P I W +K
Sbjct: 4 RPILQAGLPANASTVVGGDVEFVCKVYSDAQPHIQWIKHVEKN 46
>d1iray2 b.1.1.4 (Y:102-204) Type-1 interleukin-1 receptor {Human
(Homo sapiens) [TaxId: 9606]}
Length = 103
Score = 41.7 bits (97), Expect = 1e-06
Identities = 14/60 (23%), Positives = 22/60 (36%), Gaps = 6/60 (10%)
Query: 10 KYEGNPVKTISWMKDGKPVPDHNEPVF------RIDSVRKEDKGMYQCVIRNEQESAQAS 63
K E N + + W KD KP+ N + +V ++ +G Y C Q
Sbjct: 28 KNENNELPKLQWYKDCKPLLLDNIHFSGVKDRLIVMNVAEKHRGNYTCHASYTYLGKQYP 87
Score = 23.3 bits (49), Expect = 8.1
Identities = 8/36 (22%), Positives = 12/36 (33%), Gaps = 6/36 (16%)
Query: 84 ETLNPGPNYYFKC------IASGNPTPEISWYLDGK 113
+ L + C N P++ WY D K
Sbjct: 9 QKLPVAGDGGLVCPYMEFFKNENNELPKLQWYKDCK 44
>d1nbqa2 b.1.1.4 (A:130-233) Junction adhesion molecule, JAM,
C-terminal domain {Human (Homo sapiens) [TaxId: 9606]}
Length = 104
Score = 41.5 bits (96), Expect = 1e-06
Identities = 17/79 (21%), Positives = 27/79 (34%), Gaps = 17/79 (21%)
Query: 7 FTCK-YEGNPVKTISWMKDGKPVP----------------DHNEPVFRIDSVRKEDKGMY 49
TC +G+P +W KDG +P + D + D G Y
Sbjct: 22 LTCSEQDGSPPSEYTWFKDGIVMPTNPKSTRAFSNSSYVLNPTTGELVFDPLSASDTGEY 81
Query: 50 QCVIRNEQESAQASGELKL 68
C RN + S +++
Sbjct: 82 SCEARNGYGTPMTSNAVRM 100
Score = 31.9 bits (71), Expect = 0.006
Identities = 10/41 (24%), Positives = 14/41 (34%), Gaps = 1/41 (2%)
Query: 74 PPVIKESFSDETLNPGPNYYFKCIAS-GNPTPEISWYLDGK 113
PP + G C G+P E +W+ DG
Sbjct: 2 PPSKPTVNIPSSATIGNRAVLTCSEQDGSPPSEYTWFKDGI 42
>d1g1ca_ b.1.1.4 (A:) Titin {Human (Homo sapiens), different
modules [TaxId: 9606]}
Length = 98
Score = 41.4 bits (96), Expect = 1e-06
Identities = 11/75 (14%), Positives = 19/75 (25%), Gaps = 10/75 (13%)
Query: 7 FTCKYEGNPVKTISWMKDGKPVPDHNEPVFRID----------SVRKEDKGMYQCVIRNE 56
F + G P W K+G + + + V ED N
Sbjct: 24 FRVRVVGKPDPECEWYKNGVKIERSDRIYWYWPEDNVCELVIRDVTGEDSASIMVKAINI 83
Query: 57 QESAQASGELKLGGR 71
+ L + +
Sbjct: 84 AGETSSHAFLLVQAK 98
Score = 37.5 bits (86), Expect = 5e-05
Identities = 14/42 (33%), Positives = 21/42 (50%)
Query: 74 PPVIKESFSDETLNPGPNYYFKCIASGNPTPEISWYLDGKKL 115
P I E +T+ G + +F+ G P PE WY +G K+
Sbjct: 4 APKIFERIQSQTVGQGSDAHFRVRVVGKPDPECEWYKNGVKI 45
>d1he7a_ b.1.1.4 (A:) High affinity nerve growth factor receptor
TrkA, different domains {Human (Homo sapiens) [TaxId:
9606]}
Length = 107
Score = 40.7 bits (94), Expect = 3e-06
Identities = 13/89 (14%), Positives = 25/89 (28%), Gaps = 19/89 (21%)
Query: 7 FTCKYEGNPVKTISWMKDGKPVPDHN----------------EPVFRIDSVRKEDKGMYQ 50
+G P ++ W+ +G + + + R++ + G Y
Sbjct: 20 IPFSVDGQPAPSLRWLFNGSVLNETSFIFTEFLEPAANETVRHGCLRLNQPTHVNNGNYT 79
Query: 51 CVIRNEQESAQASGELKLGGRFDPPVIKE 79
+ N A AS D P
Sbjct: 80 LLAANPFGQASASIMAAF---MDNPFEFN 105
Score = 24.5 bits (52), Expect = 2.7
Identities = 6/24 (25%), Positives = 8/24 (33%)
Query: 94 FKCIASGNPTPEISWYLDGKKLVN 117
G P P + W +G L
Sbjct: 20 IPFSVDGQPAPSLRWLFNGSVLNE 43
>d1koaa1 b.1.1.4 (A:6265-6361) Twitchin {Nematode (Caenorhabditis
elegans) [TaxId: 6239]}
Length = 97
Score = 40.3 bits (93), Expect = 3e-06
Identities = 15/77 (19%), Positives = 29/77 (37%), Gaps = 9/77 (11%)
Query: 7 FTCKYEGNPVKTISWMKDG---------KPVPDHNEPVFRIDSVRKEDKGMYQCVIRNEQ 57
F C+ + ++W KD + N+ I+ V+ +DKG Y +N
Sbjct: 21 FYCRVIASSPPVVTWHKDDRELKQSVKYMKRYNGNDYGLTINRVKGDDKGEYTVRAKNSY 80
Query: 58 ESAQASGELKLGGRFDP 74
+ + L + +P
Sbjct: 81 GTKEEIVFLNVTRHSEP 97
Score = 31.4 bits (70), Expect = 0.007
Identities = 6/35 (17%), Positives = 12/35 (34%)
Query: 75 PVIKESFSDETLNPGPNYYFKCIASGNPTPEISWY 109
P + G + F C + P ++W+
Sbjct: 2 PRFIVKPYGTEVGEGQSANFYCRVIASSPPVVTWH 36
>d1wwbx_ b.1.1.4 (X:) Ligand binding domain of trkB receptor {Human
(Homo sapiens) [TaxId: 9606]}
Length = 103
Score = 40.3 bits (93), Expect = 4e-06
Identities = 12/85 (14%), Positives = 24/85 (28%), Gaps = 17/85 (20%)
Query: 7 FTCKYEGNPVKTISWMKDGKPVPDHNEP--------------VFRIDSVRKEDKGMYQCV 52
+GNP + W +G + + ++D+ + G Y +
Sbjct: 21 IPFTVKGNPKPALQWFYNGAILNESKYICTKIHVTNHTEYHGCLQLDNPTHMNNGDYTLI 80
Query: 53 IRNEQESAQASGELKLGGRFDPPVI 77
+NE + P I
Sbjct: 81 AKNEYGKDEKQISAHF---MGWPGI 102
Score = 29.9 bits (66), Expect = 0.025
Identities = 10/42 (23%), Positives = 17/42 (40%), Gaps = 3/42 (7%)
Query: 74 PPVIKESFSDETLNPGPNYYFKCIASGNPTPEISWYLDGKKL 115
P I S + + ++ GNP P + W+ +G L
Sbjct: 4 APTITFLESPTSDH---HWCIPFTVKGNPKPALQWFYNGAIL 42
>d1x44a1 b.1.1.4 (A:8-97) Myosin-binding protein C, slow-type
{Human (Homo sapiens) [TaxId: 9606]}
Length = 90
Score = 39.8 bits (92), Expect = 4e-06
Identities = 14/72 (19%), Positives = 25/72 (34%), Gaps = 12/72 (16%)
Query: 7 FTCKYEGNPVKTISWMKDGKP-----------VPDHNEPVFRIDSVRKEDKGMYQCVIRN 55
C+ + W K+G+ + + + I+ K D Y +
Sbjct: 20 LECEV-SEDDANVKWFKNGEEIIPGPKSRYRIRVEGKKHILIIEGATKADAAEYSVMTTG 78
Query: 56 EQESAQASGELK 67
Q SA+ S +LK
Sbjct: 79 GQSSAKLSVDLK 90
>d1rhfa1 b.1.1.1 (A:7-97) Tyrosine-protein kinase receptor tyro3,
N-terminal domain {Human (Homo sapiens) [TaxId: 9606]}
Length = 91
Score = 39.6 bits (91), Expect = 6e-06
Identities = 16/68 (23%), Positives = 26/68 (38%), Gaps = 11/68 (16%)
Query: 7 FTCKYEGNPVKTISWMKDGKPVPDHNEP-----------VFRIDSVRKEDKGMYQCVIRN 55
C EG I W+KDG V + ++ + SV + D G Y C + +
Sbjct: 16 LNCSVEGMEEPDIQWVKDGAVVQNLDQLYIPVSEQHWIGFLSLKSVERSDAGRYWCQVED 75
Query: 56 EQESAQAS 63
E+ +
Sbjct: 76 GGETEISQ 83
Score = 28.4 bits (62), Expect = 0.10
Identities = 7/28 (25%), Positives = 10/28 (35%)
Query: 82 SDETLNPGPNYYFKCIASGNPTPEISWY 109
T++ G C G P+I W
Sbjct: 4 VKLTVSQGQPVKLNCSVEGMEEPDIQWV 31
>d1fhga_ b.1.1.4 (A:) Telokin {Turkey (Meleagris gallopavo)
[TaxId: 9103]}
Length = 102
Score = 39.1 bits (90), Expect = 1e-05
Identities = 20/71 (28%), Positives = 24/71 (33%), Gaps = 10/71 (14%)
Query: 7 FTCKYEGNPVKTISWMKDGKPVPDHNEPVFRID----------SVRKEDKGMYQCVIRNE 56
F CK EG P + W KD PV + D V +D Y C N
Sbjct: 28 FDCKVEGYPDPEVMWFKDDNPVKESRHFQIDYDEEGNCSLTISEVCGDDDAKYTCKAVNS 87
Query: 57 QESAQASGELK 67
A + EL
Sbjct: 88 LGEATCTAELL 98
Score = 31.0 bits (69), Expect = 0.013
Identities = 10/36 (27%), Positives = 15/36 (41%)
Query: 74 PPVIKESFSDETLNPGPNYYFKCIASGNPTPEISWY 109
P ++ D + G F C G P PE+ W+
Sbjct: 8 KPYFTKTILDMEVVEGSAARFDCKVEGYPDPEVMWF 43
>d1rhfa2 b.1.1.4 (A:98-182) Tyrosine-protein kinase receptor
tyro3, second domain {Human (Homo sapiens) [TaxId:
9606]}
Length = 85
Score = 38.8 bits (89), Expect = 1e-05
Identities = 6/53 (11%), Positives = 12/53 (22%)
Query: 4 LKFFTCKYEGNPVKTISWMKDGKPVPDHNEPVFRIDSVRKEDKGMYQCVIRNE 56
+ TI W + + ++ M+ C N
Sbjct: 19 FQLSCEAVGPPEPVTIVWWRGTTKIGGPAPSPSVLNVTGVTQSTMFSCEAHNL 71
>d2oz4a3 b.1.1.4 (A:367-450) Intercellular adhesion molecule-1,
ICAM-1 {Human (Homo sapiens) [TaxId: 9606]}
Length = 84
Score = 38.4 bits (88), Expect = 1e-05
Identities = 13/61 (21%), Positives = 24/61 (39%), Gaps = 4/61 (6%)
Query: 7 FTCKYEGNPVKTISWMKDGKPVPDHNEPVFRIDSVRKEDKGMYQCVIRNEQESAQASGEL 66
C+ GNP+ + +KD P+ +V ++ +G Y C R+ Q +
Sbjct: 24 PMCQAWGNPLPELKCLKD----GTFPLPIGESVTVTRDLEGTYLCRARSTQGEVTREVTV 79
Query: 67 K 67
Sbjct: 80 N 80
Score = 30.7 bits (68), Expect = 0.012
Identities = 10/38 (26%), Positives = 13/38 (34%), Gaps = 2/38 (5%)
Query: 74 PPVIKESF--SDETLNPGPNYYFKCIASGNPTPEISWY 109
P + E + T C A GNP PE+
Sbjct: 2 GPRLDERDCPGNWTWPENSQQTPMCQAWGNPLPELKCL 39
>d1gl4b_ b.1.1.4 (B:) Perlecan Ig3 domain {Mouse (Mus musculus)
[TaxId: 10090]}
Length = 89
Score = 38.0 bits (87), Expect = 3e-05
Identities = 13/68 (19%), Positives = 21/68 (30%), Gaps = 4/68 (5%)
Query: 4 LKFFTCKYEGNPVKTISWMKDGKPVPDHNEP----VFRIDSVRKEDKGMYQCVIRNEQES 59
+ F +P T+ W + + I +V+ D G Y C N
Sbjct: 20 VTFICTAKSKSPAYTLVWTRLHNGKLPSRAMDFNGILTIRNVQPSDAGTYVCTGSNMFAM 79
Query: 60 AQASGELK 67
Q + L
Sbjct: 80 DQGTATLH 87
Score = 28.4 bits (62), Expect = 0.081
Identities = 9/45 (20%), Positives = 16/45 (35%), Gaps = 1/45 (2%)
Query: 74 PPVIKESFSDETLNPGPNYYFKCIAS-GNPTPEISWYLDGKKLVN 117
V E +++ PG + F C A +P + W +
Sbjct: 2 IMVTVEEQRSQSVRPGADVTFICTAKSKSPAYTLVWTRLHNGKLP 46
>d1n26a1 b.1.1.4 (A:1-93) Interleukin-6 receptor alpha chain,
N-terminal domain {Human (Homo sapiens) [TaxId: 9606]}
Length = 93
Score = 37.2 bits (85), Expect = 5e-05
Identities = 9/50 (18%), Positives = 13/50 (26%), Gaps = 6/50 (12%)
Query: 13 GNPVKTISWMKDGKPVPDHNEPV------FRIDSVRKEDKGMYQCVIRNE 56
T+ W+ H + SV+ D G Y C
Sbjct: 33 PEDNATVHWVLRKPAAGSHPSRWAGMGRRLLLRSVQLHDSGNYSCYRAGR 82
>d1gxea_ b.1.1.4 (A:) Cardiac myosin binding protein C, different
domains {Human (Homo sapiens) [TaxId: 9606]}
Length = 130
Score = 37.7 bits (86), Expect = 6e-05
Identities = 14/99 (14%), Positives = 26/99 (26%), Gaps = 38/99 (38%)
Query: 7 FTCKYEGNPVKTISWMKDGKPVPDH----------------------------------- 31
G+P T+ W K
Sbjct: 29 LDVPISGDPAPTVIWQKAITQGNKAPARPAPDAPEDTGDSDEWVFDKKLLCETEGRVRVE 88
Query: 32 ---NEPVFRIDSVRKEDKGMYQCVIRNEQESAQASGELK 67
+ +F ++ KED+G+Y ++N Q + +K
Sbjct: 89 TTKDRSIFTVEGAEKEDEGVYTVTVKNPVGEDQVNLTVK 127
Score = 33.9 bits (76), Expect = 0.002
Identities = 10/52 (19%), Positives = 15/52 (28%), Gaps = 5/52 (9%)
Query: 71 RFDPPVIKESFSDE-----TLNPGPNYYFKCIASGNPTPEISWYLDGKKLVN 117
R +PP I + G SG+P P + W +
Sbjct: 1 RQEPPKIHLDCPGRIPDTIVVVAGNKLRLDVPISGDPAPTVIWQKAITQGNK 52
>d1cs6a1 b.1.1.4 (A:7-103) Axonin-1 {Chicken (Gallus gallus)
[TaxId: 9031]}
Length = 97
Score = 36.8 bits (84), Expect = 8e-05
Identities = 16/62 (25%), Positives = 26/62 (41%), Gaps = 8/62 (12%)
Query: 7 FTCKYEGNPVKTISWMKDGKPVPDHNEPVFR--------IDSVRKEDKGMYQCVIRNEQE 58
TC+ NP T W +G + + +R + V+ +D G YQCV N +
Sbjct: 27 LTCRARANPPATYRWKMNGTELKMGPDSRYRLVAGDLVISNPVKAKDAGSYQCVATNARG 86
Query: 59 SA 60
+
Sbjct: 87 TV 88
Score = 31.4 bits (70), Expect = 0.008
Identities = 9/39 (23%), Positives = 11/39 (28%), Gaps = 3/39 (7%)
Query: 74 PPVIKESFSDETLNPGP---NYYFKCIASGNPTPEISWY 109
PV +E + G C A NP W
Sbjct: 4 GPVFEEQPAHTLFPEGSAEEKVTLTCRARANPPATYRWK 42
>d1pkoa_ b.1.1.1 (A:) Myelin oligodendrocyte glycoprotein (MOG) {Rat
(Rattus norvegicus) [TaxId: 10116]}
Length = 126
Score = 36.6 bits (83), Expect = 1e-04
Identities = 15/49 (30%), Positives = 22/49 (44%), Gaps = 3/49 (6%)
Query: 29 PDHNEPVFRIDSVRKEDKGMYQCVIRNEQESAQASGELKLGGRFDPPVI 77
+ RI +VR D+G Y C R+ +A+ ELK+ DP
Sbjct: 76 IGEGKVALRIQNVRFSDEGGYTCFFRDHSYQEEAAVELKV---EDPFYW 121
>d2c9aa1 b.1.1.4 (A:184-279) Receptor-type tyrosine-protein
phosphatase mu {Human (Homo sapiens) [TaxId: 9606]}
Length = 96
Score = 35.8 bits (81), Expect = 2e-04
Identities = 15/69 (21%), Positives = 21/69 (30%), Gaps = 12/69 (17%)
Query: 7 FTCKYEGNPVKTISWMKDGKPVP------------DHNEPVFRIDSVRKEDKGMYQCVIR 54
F C G V G V F + + K D G Y+C+IR
Sbjct: 21 FQCSAIGRTVAGDRLWLQGIDVRDAPLKEIKVTSSRRFIASFNVVNTTKRDAGKYRCMIR 80
Query: 55 NEQESAQAS 63
E ++
Sbjct: 81 TEGGVGISN 89
>d1biha3 b.1.1.4 (A:210-306) Hemolin {Moth (Hyalophora cecropia)
[TaxId: 7123]}
Length = 97
Score = 35.3 bits (80), Expect = 3e-04
Identities = 16/68 (23%), Positives = 25/68 (36%), Gaps = 11/68 (16%)
Query: 7 FTCKYEGNPVKTISWMKDGKPVPDHNEP-----------VFRIDSVRKEDKGMYQCVIRN 55
C Y NP+ ++ K+GK V + E + ED+G+Y C + N
Sbjct: 23 IYCMYGSNPMGYPNYFKNGKDVNGNPEDRITRHNRTSGKRLLFKTTLPEDEGVYTCEVDN 82
Query: 56 EQESAQAS 63
Q
Sbjct: 83 GVGKPQKH 90
Score = 30.6 bits (68), Expect = 0.013
Identities = 7/37 (18%), Positives = 12/37 (32%)
Query: 73 DPPVIKESFSDETLNPGPNYYFKCIASGNPTPEISWY 109
PV + D G C+ NP +++
Sbjct: 2 GEPVPQYVSKDMMAKAGDVTMIYCMYGSNPMGYPNYF 38
>d2avga1 b.1.1.4 (A:1-110) Cardiac myosin binding protein C,
different domains {Human (Homo sapiens) [TaxId: 9606]}
Length = 110
Score = 34.6 bits (78), Expect = 5e-04
Identities = 6/63 (9%), Positives = 15/63 (23%)
Query: 5 KFFTCKYEGNPVKTISWMKDGKPVPDHNEPVFRIDSVRKEDKGMYQCVIRNEQESAQASG 64
K + + I + G Y+C + + + ++
Sbjct: 43 KGKWVDLSSKVGQHLQLHDSYDRASKVYLFELHITDAQPAFTGGYRCEVSTKDKFDCSNF 102
Query: 65 ELK 67
L
Sbjct: 103 NLT 105
Score = 25.8 bits (55), Expect = 1.2
Identities = 6/41 (14%), Positives = 12/41 (29%), Gaps = 3/41 (7%)
Query: 74 PPVIKESFSDETLNPGPNYYFKCIASGNP---TPEISWYLD 111
+ D + G + F +G P + W+
Sbjct: 4 IGLFVMRPQDGEVTVGGSITFSARVAGASLLKPPVVKWFKG 44
>d1iray1 b.1.1.4 (Y:1-101) Type-1 interleukin-1 receptor {Human
(Homo sapiens) [TaxId: 9606]}
Length = 101
Score = 33.4 bits (75), Expect = 0.001
Identities = 19/71 (26%), Positives = 23/71 (32%), Gaps = 10/71 (14%)
Query: 7 FTCKY-EGNPVKTISWMKDGKPVPDHNEPVFRID---------SVRKEDKGMYQCVIRNE 56
C TI+W KD P E RI + ED G Y CV+RN
Sbjct: 22 RPCPLNPNEHKGTITWYKDDSKTPVSTEQASRIHQHKEKLWFVPAKVEDSGHYYCVVRNS 81
Query: 57 QESAQASGELK 67
+ K
Sbjct: 82 SYCLRIKISAK 92
>d1biha1 b.1.1.4 (A:5-98) Hemolin {Moth (Hyalophora cecropia)
[TaxId: 7123]}
Length = 94
Score = 33.1 bits (74), Expect = 0.002
Identities = 12/66 (18%), Positives = 16/66 (24%), Gaps = 9/66 (13%)
Query: 7 FTCKYEGNPVKTISWMKDG---------KPVPDHNEPVFRIDSVRKEDKGMYQCVIRNEQ 57
C EGN K +E + D+G YQC
Sbjct: 22 LECIIEGNDQGVKYSWKKDGKSYNWQEHNAALRKDEGSLVFLRPQASDEGHYQCFAETPA 81
Query: 58 ESAQAS 63
A +
Sbjct: 82 GVASSR 87
Score = 28.5 bits (62), Expect = 0.079
Identities = 7/36 (19%), Positives = 13/36 (36%)
Query: 74 PPVIKESFSDETLNPGPNYYFKCIASGNPTPEISWY 109
PV+K+ ++ +CI GN +
Sbjct: 2 YPVLKDQPAEVLFRENNPTVLECIIEGNDQGVKYSW 37
>d1neua_ b.1.1.1 (A:) Myelin membrane adhesion molecule P0 {Rat
(Rattus norvegicus) [TaxId: 10116]}
Length = 119
Score = 33.3 bits (75), Expect = 0.002
Identities = 7/40 (17%), Positives = 17/40 (42%)
Query: 29 PDHNEPVFRIDSVRKEDKGMYQCVIRNEQESAQASGELKL 68
P + I ++ D G + C ++N + + ++ L
Sbjct: 76 PSWKDGSIVIHNLDYSDNGTFTCDVKNPPDIVGKTSQVTL 115
>d1jbja2 b.1.1.4 (A:1-100) CD3 epsilon chain ectodomain fragment
{Mouse (Mus musculus) [TaxId: 10090]}
Length = 100
Score = 33.0 bits (75), Expect = 0.002
Identities = 12/54 (22%), Positives = 24/54 (44%), Gaps = 3/54 (5%)
Query: 8 TCKYEGNPVKTISWMKDGKPVPDHNEPVFRI-DSVRKEDKGMYQCVIRNEQESA 60
TC + + + + W K+G+ +P ++ + D ED G Y C ++
Sbjct: 20 TCPLDSD--ENLKWEKNGQELPQKHDKHLVLQDFSEVEDSGYYVCYTPASNKNT 71
>d2ifga1 b.1.1.4 (A:192-283) High affinity nerve growth factor
receptor TrkA, different domains {Human (Homo sapiens)
[TaxId: 9606]}
Length = 92
Score = 32.8 bits (73), Expect = 0.002
Identities = 7/42 (16%), Positives = 16/42 (38%)
Query: 74 PPVIKESFSDETLNPGPNYYFKCIASGNPTPEISWYLDGKKL 115
P +K + +++ G + +C G + W L +
Sbjct: 2 VPTLKVQVPNASVDVGDDVLLRCQVEGRGLEQAGWILTELEQ 43
>d1wwca_ b.1.1.4 (A:) NT3 binding domain of trkC receptor {Human
(Homo sapiens) [TaxId: 9606]}
Length = 105
Score = 33.0 bits (74), Expect = 0.003
Identities = 13/82 (15%), Positives = 26/82 (31%), Gaps = 13/82 (15%)
Query: 7 FTCKYEGNPVKTISWMKDGKPVP-------------DHNEPVFRIDSVRKEDKGMYQCVI 53
GNP T+ W+ +G+P+ + +E + + G Y +
Sbjct: 22 IEFVVRGNPPPTLHWLHNGQPLRESKIIHVEYYQEGEISEGCLLFNKPTHYNNGNYTLIA 81
Query: 54 RNEQESAQASGELKLGGRFDPP 75
+N +A + P
Sbjct: 82 KNPLGTANQTINGHFLKEPFPV 103
Score = 25.3 bits (54), Expect = 1.2
Identities = 8/38 (21%), Positives = 14/38 (36%), Gaps = 3/38 (7%)
Query: 74 PPVIKESFSDETLNPGPNYYFKCIASGNPTPEISWYLD 111
PP + E + + + GNP P + W +
Sbjct: 5 PPRVVSLEEPELRL---EHCIEFVVRGNPPPTLHWLHN 39
>d1wiua_ b.1.1.4 (A:) Twitchin {Nematode (Caenorhabditis elegans)
[TaxId: 6239]}
Length = 93
Score = 32.3 bits (72), Expect = 0.003
Identities = 7/36 (19%), Positives = 12/36 (33%)
Query: 74 PPVIKESFSDETLNPGPNYYFKCIASGNPTPEISWY 109
P I + + G + + G P P +W
Sbjct: 2 KPKILTASRKIKIKAGFTHNLEVDFIGAPDPTATWT 37
Score = 30.3 bits (67), Expect = 0.016
Identities = 12/70 (17%), Positives = 22/70 (31%), Gaps = 9/70 (12%)
Query: 7 FTCKYEGNPVKTISWMKDGKPVP---------DHNEPVFRIDSVRKEDKGMYQCVIRNEQ 57
+ G P T +W + S ++ D G Y+ ++NE
Sbjct: 22 LEVDFIGAPDPTATWTVGDSGAALAPELLVDAKSSTTSIFFPSAKRADSGNYKLKVKNEL 81
Query: 58 ESAQASGELK 67
+A E+
Sbjct: 82 GEDEAIFEVI 91
>d1pd6a_ b.1.1.4 (A:) Cardiac myosin binding protein C, different
domains {Human (Homo sapiens) [TaxId: 9606]}
Length = 94
Score = 32.1 bits (72), Expect = 0.004
Identities = 12/65 (18%), Positives = 23/65 (35%), Gaps = 11/65 (16%)
Query: 7 FTCKYEGNPVKTISWMKDGKPVP----------DHNEPVFRIDSVRKEDKGMYQCVIRNE 56
T + + + W+K+G+ + + I D YQCV+ E
Sbjct: 26 LTVEL-ADHDAEVKWLKNGQEIQMSGSKYIFESIGAKRTLTISQCSLADDAAYQCVVGGE 84
Query: 57 QESAQ 61
+ S +
Sbjct: 85 KCSTE 89
>d1zxqa1 b.1.1.3 (A:87-192) Intercellular cell adhesion molecule-2
(ICAM-2) {Human (Homo sapiens) [TaxId: 9606]}
Length = 106
Score = 32.3 bits (72), Expect = 0.004
Identities = 4/45 (8%), Positives = 14/45 (31%), Gaps = 3/45 (6%)
Query: 74 PPVIKESFSDETLNPGPNYYFKCIASG---NPTPEISWYLDGKKL 115
P + + + G ++ +C + + + + L
Sbjct: 2 PRQVILTLQPTLVAVGKSFTIECRVPTVEPLDSLTLFLFRGNETL 46
Score = 27.7 bits (60), Expect = 0.21
Identities = 6/71 (8%), Positives = 18/71 (25%), Gaps = 14/71 (19%)
Query: 7 FTCKYEG---NPVKTISWMKDGKPVPDHNE-----------PVFRIDSVRKEDKGMYQCV 52
C+ T+ + + + F + R++ + C+
Sbjct: 22 IECRVPTVEPLDSLTLFLFRGNETLHYETFGKAAPAPQEATATFNSTADREDGHRNFSCL 81
Query: 53 IRNEQESAQAS 63
+ S +
Sbjct: 82 AVLDLMSRGGN 92
>d3b5ha1 b.1.1.4 (A:103-203) Cervical EMMPRIN {Human (Homo sapiens)
[TaxId: 9606]}
Length = 101
Score = 32.3 bits (72), Expect = 0.004
Identities = 9/36 (25%), Positives = 13/36 (36%)
Query: 74 PPVIKESFSDETLNPGPNYYFKCIASGNPTPEISWY 109
PP +K S E +N G C + P +
Sbjct: 2 PPRVKAVKSSEHINEGETAMLVCKSESVPPVTDWAW 37
Score = 29.6 bits (65), Expect = 0.032
Identities = 14/78 (17%), Positives = 21/78 (26%), Gaps = 17/78 (21%)
Query: 7 FTCKYEGNPVKTISWMKDGKP----------------VPDHNEPVFRIDSVRKEDK-GMY 49
CK E P T I+++ E G Y
Sbjct: 22 LVCKSESVPPVTDWAWYKITDSEDKALMNGSESRFFVSSSQGRSELHIENLNMEADPGQY 81
Query: 50 QCVIRNEQESAQASGELK 67
+C + + S QA L+
Sbjct: 82 RCNGTSSKGSDQAIITLR 99
>d1iray3 b.1.1.4 (Y:205-311) Type-1 interleukin-1 receptor {Human
(Homo sapiens) [TaxId: 9606]}
Length = 107
Score = 32.0 bits (71), Expect = 0.006
Identities = 10/84 (11%), Positives = 17/84 (20%), Gaps = 22/84 (26%)
Query: 7 FTCKYEGNPVKTISWMKDGKPVPD---------------------HNEPVFRIDSVRKED 45
C G W +G + + V I +
Sbjct: 22 LICNVTGQLSDIAYWKWNGSVIDEDDPVLGEDYYSVENPANKRRSTLITVLNISEIESRF 81
Query: 46 KGM-YQCVIRNEQESAQASGELKL 68
+ C +N A +L
Sbjct: 82 YKHPFTCFAKNTHGIDAAYIQLIY 105
Score = 28.6 bits (62), Expect = 0.098
Identities = 6/40 (15%), Positives = 14/40 (35%)
Query: 74 PPVIKESFSDETLNPGPNYYFKCIASGNPTPEISWYLDGK 113
P ++ + ++ G C +G + W +G
Sbjct: 2 PVIVSPANETMEVDLGSQIQLICNVTGQLSDIAYWKWNGS 41
>d1fnla1 b.1.1.4 (A:3-86) Fc gamma receptor ectodomain (CD32)
{Human (Homo sapiens), III [TaxId: 9606]}
Length = 84
Score = 31.4 bits (70), Expect = 0.006
Identities = 9/53 (16%), Positives = 17/53 (32%)
Query: 7 FTCKYEGNPVKTISWMKDGKPVPDHNEPVFRIDSVRKEDKGMYQCVIRNEQES 59
C+ +P + + + + ID+ D G Y+C S
Sbjct: 25 LKCQGAYSPEDNSTQWFHNESLISSQASSYFIDAATVNDSGEYRCQTNLSTLS 77
>d2dava1 b.1.1.4 (A:8-120) Myosin-binding protein C, slow-type
{Human (Homo sapiens) [TaxId: 9606]}
Length = 113
Score = 31.6 bits (70), Expect = 0.007
Identities = 7/62 (11%), Positives = 18/62 (29%)
Query: 6 FFTCKYEGNPVKTISWMKDGKPVPDHNEPVFRIDSVRKEDKGMYQCVIRNEQESAQASGE 65
K + + + +I + G Y+C + + + S +
Sbjct: 40 GKWMDLASKAGKHLQLKETFERHSRVYTFEMQIIKAKDNFAGNYRCEVTYKDKFDSCSFD 99
Query: 66 LK 67
L+
Sbjct: 100 LE 101
>d1eaja_ b.1.1.1 (A:) Coxsackie virus and adenovirus receptor (Car),
domain 1 {Human (Homo sapiens) [TaxId: 9606]}
Length = 124
Score = 31.5 bits (70), Expect = 0.009
Identities = 7/39 (17%), Positives = 14/39 (35%)
Query: 29 PDHNEPVFRIDSVRKEDKGMYQCVIRNEQESAQASGELK 67
+ + +++ D G YQC ++ A L
Sbjct: 83 LKSGDASINVTNLQLSDIGTYQCKVKKAPGVANKKIHLV 121
>d2nxyb1 b.1.1.1 (B:1001-1097) CD4 V-set domains {Human (Homo
sapiens) [TaxId: 9606]}
Length = 97
Score = 30.9 bits (69), Expect = 0.010
Identities = 7/25 (28%), Positives = 14/25 (56%)
Query: 37 RIDSVRKEDKGMYQCVIRNEQESAQ 61
I +++ ED Y C + +++E Q
Sbjct: 70 IIKNLKIEDSDTYICEVEDQKEEVQ 94
>d1ccza1 b.1.1.1 (A:1-93) CD2-binding domain of CD58, N-terminal
domain {Human (Homo sapiens) [TaxId: 9606]}
Length = 93
Score = 31.0 bits (69), Expect = 0.011
Identities = 6/63 (9%), Positives = 16/63 (25%)
Query: 1 MLALKFFTCKYEGNPVKTISWMKDGKPVPDHNEPVFRIDSVRKEDKGMYQCVIRNEQESA 60
+ + N + D I ++ D+ Y+ N ++
Sbjct: 27 LWKKQKDKVAELENSEFRAFSSFKNRVYLDTVSGSLTIYNLTSSDEDEYEMESPNITDTM 86
Query: 61 QAS 63
+
Sbjct: 87 KFF 89
>d1f97a1 b.1.1.1 (A:27-128) Junction adhesion molecule, JAM,
N-terminal domain {Mouse (Mus musculus) [TaxId: 10090]}
Length = 102
Score = 30.8 bits (68), Expect = 0.013
Identities = 8/48 (16%), Positives = 14/48 (29%)
Query: 21 WMKDGKPVPDHNEPVFRIDSVRKEDKGMYQCVIRNEQESAQASGELKL 68
+ SV ++D G Y C++ E + L
Sbjct: 52 ITAPYADRVTFSSSGITFSSVTRKDNGEYTCMVSEEGGQNYGEVSIHL 99
>d1l6za1 b.1.1.1 (A:1-107) Biliary glycoprotein C (CD66a,
CEACAM1A[1,4]), N-terminal domain {Mouse (Mus musculus)
[TaxId: 10090]}
Length = 107
Score = 30.8 bits (69), Expect = 0.015
Identities = 5/33 (15%), Positives = 10/33 (30%), Gaps = 1/33 (3%)
Query: 36 FRIDSVRKEDKGMYQC-VIRNEQESAQASGELK 67
+ +D G+Y + QA+
Sbjct: 73 LLFQMITMKDMGVYTLDMTDENYRRTQATVRFH 105
>d1xmwa2 b.1.1.4 (A:113-178) CD3 epsilon chain ectodomain fragment
{Sheep (Ovis aries) [TaxId: 9940]}
Length = 66
Score = 29.7 bits (67), Expect = 0.017
Identities = 8/56 (14%), Positives = 19/56 (33%), Gaps = 6/56 (10%)
Query: 6 FFTCKYEGNPVKTISWMKDGKPVPDHNEPVFRIDSVRKEDKGMYQCVIRNEQESAQ 61
C +I+ ++ + + ++ +GMYQC + + Q
Sbjct: 12 ILKCN------SSITLLQGTAGQEVSDNKTLNLGKRIEDPRGMYQCGENAKSFTLQ 61
>d1dr9a1 b.1.1.1 (A:1-105) CD80, N-terminal domain {Human (Homo
sapiens) [TaxId: 9606]}
Length = 105
Score = 30.3 bits (67), Expect = 0.021
Identities = 7/23 (30%), Positives = 14/23 (60%)
Query: 37 RIDSVRKEDKGMYQCVIRNEQES 59
I ++R D+G Y+CV+ ++
Sbjct: 68 VILALRPSDEGTYECVVLKYEKD 90
>d1xiwb_ b.1.1.4 (B:) CD3 delta chain ectodomain fragment {Human
(Homo sapiens) [TaxId: 9606]}
Length = 74
Score = 29.5 bits (66), Expect = 0.023
Identities = 7/46 (15%), Positives = 17/46 (36%), Gaps = 6/46 (13%)
Query: 6 FFTCKYEGNPVKTISWMKDGKPVPDHNEPVFRIDSVRKEDKGMYQC 51
F C +I+W++ + + + +G+Y+C
Sbjct: 13 FVNCN------TSITWVEGTVGTLLSDITRLDLGKRILDPRGIYRC 52
>d2aw2a1 b.1.1.1 (A:34-137) B- and T-lymphocyte attenuator CD272
{Human (Homo sapiens) [TaxId: 9606]}
Length = 104
Score = 30.0 bits (66), Expect = 0.024
Identities = 6/46 (13%), Positives = 15/46 (32%), Gaps = 1/46 (2%)
Query: 73 DPPVIKESFSDETLNPGPNYYFKCIASGNP-TPEISWYLDGKKLVN 117
D + + S+ ++ G + +C P ++W
Sbjct: 2 DVQLYIKRQSEHSILAGDPFELECPVKYCANRPHVTWCKLNGTTCV 47
>d1f2qa1 b.1.1.4 (A:4-85) IgE high affinity receptor alpha subunit
{Human (Homo sapiens) [TaxId: 9606]}
Length = 82
Score = 29.6 bits (65), Expect = 0.026
Identities = 10/57 (17%), Positives = 18/57 (31%)
Query: 6 FFTCKYEGNPVKTISWMKDGKPVPDHNEPVFRIDSVRKEDKGMYQCVIRNEQESAQA 62
TC + + + + I + + ED G Y+C + ES
Sbjct: 20 TLTCNGNNFFEVSSTKWFHNGSLSEETNSSLNIVNAKFEDSGEYKCQHQQVNESEPV 76
>d1jbja1 b.1.1.4 (A:101-186) CD3 gamma chain ectodomain fragment
{Mouse (Mus musculus) [TaxId: 10090]}
Length = 86
Score = 29.5 bits (66), Expect = 0.029
Identities = 15/56 (26%), Positives = 25/56 (44%), Gaps = 5/56 (8%)
Query: 6 FFTCKYEGNPVKTISWMKDGKPV--PDHNEPVFRIDSVRKEDKGMYQCVIRNEQES 59
TC KTI W+KDG + + + + + + K+ +G YQC E +
Sbjct: 26 LLTCG---LTDKTIKWLKDGSIISPLNATKNTWNLGNNAKDPRGTYQCQGAKETSN 78
>d1tiua_ b.1.1.4 (A:) Twitchin {Human (Homo sapiens), Ig repeat 27
[TaxId: 9606]}
Length = 89
Score = 29.0 bits (64), Expect = 0.061
Identities = 8/64 (12%), Positives = 18/64 (28%), Gaps = 10/64 (15%)
Query: 7 FTCKYEGNPVKTISWMKDGKPVPDH---------NEPVFRIDSVRKEDKGMYQCVIRNEQ 57
F + P W G+P+ + + + + + G N +
Sbjct: 21 FEIEL-SEPDVHGQWKLKGQPLTASPDCEIIEDGKKHILILHNCQLGMTGEVSFQAANAK 79
Query: 58 ESAQ 61
+A
Sbjct: 80 SAAN 83
>d1ucta1 b.1.1.4 (A:2-100) Ig alpha Fc receptor, FCARI (CD89)
{Human (Homo sapiens) [TaxId: 9606]}
Length = 99
Score = 28.9 bits (64), Expect = 0.067
Identities = 13/64 (20%), Positives = 18/64 (28%), Gaps = 10/64 (15%)
Query: 15 PVKTISWMKDGKPVP----------DHNEPVFRIDSVRKEDKGMYQCVIRNEQESAQASG 64
M + +P F ID + G YQC R + S
Sbjct: 33 EAYLTQLMIIKNSTYREIGRRLKFWNETDPEFVIDHMDANKAGRYQCQYRIGHYRFRYSD 92
Query: 65 ELKL 68
L+L
Sbjct: 93 TLEL 96
>d1olza1 b.1.1.4 (A:537-628) Semaphorin 4d Ig-like domain {Human
(Homo sapiens) [TaxId: 9606]}
Length = 92
Score = 28.9 bits (63), Expect = 0.072
Identities = 6/43 (13%), Positives = 14/43 (32%)
Query: 21 WMKDGKPVPDHNEPVFRIDSVRKEDKGMYQCVIRNEQESAQAS 63
+ I ++ + D G+YQC+ ++
Sbjct: 37 LKAESPKYGLMGRKNLLIFNLSEGDSGVYQCLSEERVKNKTVF 79
>d1ucta2 b.1.1.4 (A:101-196) Ig alpha Fc receptor, FCARI (CD89)
{Human (Homo sapiens) [TaxId: 9606]}
Length = 96
Score = 27.7 bits (61), Expect = 0.16
Identities = 11/50 (22%), Positives = 17/50 (34%), Gaps = 5/50 (10%)
Query: 7 FTCKYEGNPVKTISWMKDGKPVP-----DHNEPVFRIDSVRKEDKGMYQC 51
TC P S K+G+ + F + V G+Y+C
Sbjct: 24 LTCSSAHIPFDRFSLAKEGELSLPQHQSGEHPANFSLGPVDLNVSGIYRC 73
>d1ncna_ b.1.1.1 (A:) CD86 (b7-2), N-terminal domain {Human (Homo
sapiens) [TaxId: 9606]}
Length = 110
Score = 27.9 bits (61), Expect = 0.16
Identities = 10/35 (28%), Positives = 23/35 (65%)
Query: 25 GKPVPDHNEPVFRIDSVRKEDKGMYQCVIRNEQES 59
G+ D + R+ +++ +DKG+YQC+I +++ +
Sbjct: 60 GRTSFDSDSWTLRLHNLQIKDKGLYQCIIHHKKPT 94
>d1olla1 b.1.1.4 (A:1-95) Ligand binding domain of NK receptor
NKp46 {Human (Homo sapiens) [TaxId: 9606]}
Length = 95
Score = 27.3 bits (60), Expect = 0.21
Identities = 10/37 (27%), Positives = 16/37 (43%)
Query: 32 NEPVFRIDSVRKEDKGMYQCVIRNEQESAQASGELKL 68
N+ F I + G Y C+ R + ++ S L L
Sbjct: 55 NKVKFYIPDMNSRMAGQYSCIYRVGELWSEPSNLLDL 91
>d1hxma2 b.1.1.2 (A:121-206) T-cell antigen receptor {Human (Homo
sapiens), gamma-chain [TaxId: 9606]}
Length = 86
Score = 26.9 bits (59), Expect = 0.27
Identities = 6/46 (13%), Positives = 14/46 (30%), Gaps = 7/46 (15%)
Query: 18 TISWMKDGKPVPDHNEPV-------FRIDSVRKEDKGMYQCVIRNE 56
I+ + K V + + ED C ++++
Sbjct: 31 RINLVSSKKITEFDPAIVISPSGKYNAVKLGKYEDSNSVTCSVQHD 76
>d1nbqa1 b.1.1.1 (A:25-129) Junction adhesion molecule, JAM,
N-terminal domain {Human (Homo sapiens) [TaxId: 9606]}
Length = 105
Score = 27.4 bits (59), Expect = 0.28
Identities = 12/65 (18%), Positives = 20/65 (30%)
Query: 4 LKFFTCKYEGNPVKTISWMKDGKPVPDHNEPVFRIDSVRKEDKGMYQCVIRNEQESAQAS 63
KF + SV +ED G Y C++ E ++
Sbjct: 38 WKFDQGDTTRLVCYNNKITASYEDRVTFLPTGITFKSVTREDTGTYTCMVSEEGGNSYGE 97
Query: 64 GELKL 68
++KL
Sbjct: 98 VKVKL 102
>d1hnga1 b.1.1.1 (A:2-99) CD2, first domain {Rat (Rattus
norvegicus) [TaxId: 10116]}
Length = 98
Score = 26.6 bits (58), Expect = 0.40
Identities = 6/31 (19%), Positives = 14/31 (45%)
Query: 38 IDSVRKEDKGMYQCVIRNEQESAQASGELKL 68
I ++ ++D G Y + + + + L L
Sbjct: 64 IKNLTRDDSGTYNVTVYSTNGTRILNKALDL 94
>d1nkra1 b.1.1.4 (A:6-101) Killer cell inhibitory receptor {Human
(Homo sapiens), p58-cl42 kir [TaxId: 9606]}
Length = 96
Score = 26.1 bits (57), Expect = 0.72
Identities = 8/47 (17%), Positives = 16/47 (34%)
Query: 17 KTISWMKDGKPVPDHNEPVFRIDSVRKEDKGMYQCVIRNEQESAQAS 63
+ G+ ++ F I + ++ G Y+C Q S
Sbjct: 40 FNDTLRLIGEHHDGVSKANFSISRMTQDLAGTYRCYGSVTHSPYQVS 86
>d1uvqb1 b.1.1.2 (B:95-191) Class II MHC beta chain, C-terminal
domain {Human (Homo sapiens), HLA-DQ group [TaxId:
9606]}
Length = 97
Score = 25.4 bits (55), Expect = 1.1
Identities = 3/44 (6%), Positives = 13/44 (29%), Gaps = 4/44 (9%)
Query: 18 TISWMKDGKPVPDHNEPVFRIDSVRKEDKGMYQCVIRNEQESAQ 61
+ W ++ + + + +Q ++ E +
Sbjct: 34 KVRWFRNDQEETAGVVST----PLIRNGDWTFQILVMLEMTPQR 73
>d1ugna2 b.1.1.4 (A:98-195) Ligand binding domain of lir-1 (ilt2)
{Human (Homo sapiens) [TaxId: 9606]}
Length = 98
Score = 25.4 bits (55), Expect = 1.1
Identities = 5/38 (13%), Positives = 12/38 (31%)
Query: 26 KPVPDHNEPVFRIDSVRKEDKGMYQCVIRNEQESAQAS 63
+ +F + V + Y+C + + S
Sbjct: 52 PHARGSSRAIFSVGPVSPSRRWWYRCYAYDSNSPYEWS 89
>d1fnga1 b.1.1.2 (A:82-182) Class II MHC alpha chain, C-terminal
domain {Mouse (Mus musculus), I-E group [TaxId: 10090]}
Length = 101
Score = 25.4 bits (55), Expect = 1.2
Identities = 5/44 (11%), Positives = 16/44 (36%), Gaps = 4/44 (9%)
Query: 18 TISWMKDGKPVPDHNEPVFRIDSVRKEDKGMYQCVIRNEQESAQ 61
++W+++G+PV + D +++ +
Sbjct: 37 NVTWLRNGRPVTEGVSET----VFLPRDDHLFRKFHYLTFLPST 76
>d1fltx_ b.1.1.4 (X:) Second domain of the Flt-1 receptor {Human
(Homo sapiens) [TaxId: 9606]}
Length = 95
Score = 25.1 bits (55), Expect = 1.3
Identities = 6/40 (15%), Positives = 12/40 (30%), Gaps = 6/40 (15%)
Query: 22 MKDGKPVPDHNEPV------FRIDSVRKEDKGMYQCVIRN 55
+PD + F I + ++ G+ C
Sbjct: 41 FPLDTLIPDGKRIIWDSRKGFIISNATYKEIGLLTCEATV 80
>d1qlma_ d.147.1.1 (A:) Methenyltetrahydromethanopterin
cyclohydrolase {Archaeon Methanopyrus kandleri [TaxId:
2320]}
Length = 316
Score = 25.4 bits (56), Expect = 1.8
Identities = 8/20 (40%), Positives = 12/20 (60%)
Query: 63 SGELKLGGRFDPPVIKESFS 82
+G+ G + V+KESFS
Sbjct: 296 TGKTYTAGEINVDVLKESFS 315
>d2g5ra1 b.1.1.1 (A:24-144) N-terminal domain of sialic acid binding
Ig-like lectin 7 (SIGLEC-7, p75/AIRM1) {Human (Homo
sapiens) [TaxId: 9606]}
Length = 121
Score = 24.8 bits (53), Expect = 2.2
Identities = 5/17 (29%), Positives = 6/17 (35%)
Query: 37 RIDSVRKEDKGMYQCVI 53
I R D G Y +
Sbjct: 86 SIRDARMSDAGRYFFRM 102
>d1hdmb1 b.1.1.2 (B:88-185) Class II MHC beta chain, C-terminal
domain {Human (Homo sapiens), HLA-DM [TaxId: 9606]}
Length = 98
Score = 24.5 bits (53), Expect = 2.3
Identities = 9/44 (20%), Positives = 16/44 (36%), Gaps = 4/44 (9%)
Query: 18 TISWMKDGKPVPDHNEPVFRIDSVRKEDKGMYQCVIRNEQESAQ 61
TI+W K+GK V + + + YQ + +
Sbjct: 35 TITWRKNGKLVMHSSAH----KTAQPNGDWTYQTLSHLALTPSY 74
>d1pj5a1 b.44.2.1 (A:743-830) N,N-dimethylglycine oxidase,
C-terminal domain {Arthrobacter globiformis [TaxId:
1665]}
Length = 88
Score = 24.4 bits (53), Expect = 2.4
Identities = 6/16 (37%), Positives = 9/16 (56%)
Query: 22 MKDGKPVPDHNEPVFR 37
+ DG+ + EPVF
Sbjct: 9 IDDGRSIVLGKEPVFY 24
>d1u58a1 b.1.1.2 (A:145-242) Immunomodulatory protein m144,
alpha-3 domain {Murine cytomegalovirus [TaxId: 10366]}
Length = 98
Score = 24.3 bits (52), Expect = 3.1
Identities = 7/34 (20%), Positives = 10/34 (29%)
Query: 18 TISWMKDGKPVPDHNEPVFRIDSVRKEDKGMYQC 51
I W KD + + G+YQ
Sbjct: 32 EIRWWKDDGGGGALPQTSKQHHDPLPSGNGLYQK 65
>d1fp5a2 b.1.1.2 (A:439-543) Immunoglobulin heavy chain epsilon
constant domain 4, CH4-epsilon {Human (Homo sapiens)
[TaxId: 9606]}
Length = 105
Score = 24.3 bits (52), Expect = 3.3
Identities = 6/37 (16%), Positives = 12/37 (32%), Gaps = 3/37 (8%)
Query: 18 TISWMKDGKPVPDHNEPVFRIDSVRKEDKGMYQCVIR 54
++ W+ + +PD RK + R
Sbjct: 37 SVQWLHNEVQLPDA---RHSTTQPRKTKGSGFFVFSR 70
>d2mhaa1 b.1.1.2 (A:182-270) Class I MHC, alpha-3 domain {Mouse
(Mus musculus) [TaxId: 10090]}
Length = 89
Score = 24.1 bits (52), Expect = 3.4
Identities = 8/34 (23%), Positives = 14/34 (41%), Gaps = 4/34 (11%)
Query: 18 TISWMKDGKPVPDHNEPVFRIDSVRKEDKGMYQC 51
T++W +G+ + E V R G +Q
Sbjct: 33 TLTWQLNGEELIQDMELV----ETRPAGDGTFQK 62
>d1uvqa1 b.1.1.2 (A:85-183) Class II MHC alpha chain, C-terminal
domain {Human (Homo sapiens), HLA-DQ group [TaxId:
9606]}
Length = 99
Score = 23.8 bits (51), Expect = 4.4
Identities = 5/44 (11%), Positives = 14/44 (31%), Gaps = 4/44 (9%)
Query: 18 TISWMKDGKPVPDHNEPVFRIDSVRKEDKGMYQCVIRNEQESAQ 61
I+W+ +G+ V + S + + + +
Sbjct: 37 NITWLSNGQSVTEGVSET----SFLSKSDHSFFKISYLTFLPSA 76
>d1d5mb1 b.1.1.2 (B:93-190) Class II MHC beta chain, C-terminal
domain {Human (Homo sapiens), HLA-DR group [TaxId:
9606]}
Length = 98
Score = 23.9 bits (51), Expect = 4.5
Identities = 5/51 (9%), Positives = 13/51 (25%), Gaps = 12/51 (23%)
Query: 18 TISWMKDGKPVPDHNEPV---------FRIDS---VRKEDKGMYQCVIRNE 56
+ W ++G+ F+ +Y C + +
Sbjct: 36 EVRWFRNGQEEKTGVVSTGLIQNGDWTFQTLVMLETVPRSGEVYTCQVEHP 86
>d1k5na1 b.1.1.2 (A:182-276) Class I MHC, alpha-3 domain {Human
(Homo sapiens) [TaxId: 9606]}
Length = 95
Score = 23.5 bits (50), Expect = 4.9
Identities = 8/33 (24%), Positives = 13/33 (39%), Gaps = 4/33 (12%)
Query: 18 TISWMKDGKPVPDHNEPVFRIDSVRKEDKGMYQ 50
T++W +DG+ E V R +Q
Sbjct: 33 TLTWQRDGEDQTQDTELV----ETRPAGDRTFQ 61
>d1rzfl2 b.1.1.2 (L:109-210) Immunoglobulin light chain lambda
constant domain, CL-lambda {Human (Homo sapiens)
[TaxId: 9606]}
Length = 102
Score = 23.0 bits (49), Expect = 7.9
Identities = 8/33 (24%), Positives = 12/33 (36%), Gaps = 4/33 (12%)
Query: 18 TISWMKDGKPVPDHNEPVFRIDSVRKEDKGMYQ 50
T++W D PV E + K+ Y
Sbjct: 38 TVAWKADSSPVKAGVET----TTPSKQSNNKYA 66
>d1cqka_ b.1.1.2 (A:) Immunoglobulin heavy chain gamma constant
domain 3, CH3-gamma {Mouse (Mus musculus) [TaxId:
10090]}
Length = 101
Score = 23.1 bits (49), Expect = 9.2
Identities = 5/23 (21%), Positives = 12/23 (52%)
Query: 18 TISWMKDGKPVPDHNEPVFRIDS 40
T+ W +G+P ++ +D+
Sbjct: 36 TVEWQWNGQPAENYKNTQPIMDT 58
>d1q0xl2 b.1.1.2 (L:108-212) Immunoglobulin light chain lambda
constant domain, CL-lambda {Human (Homo sapiens)
[TaxId: 9606]}
Length = 102
Score = 22.7 bits (48), Expect = 9.5
Identities = 6/13 (46%), Positives = 7/13 (53%)
Query: 18 TISWMKDGKPVPD 30
T+ W DG PV
Sbjct: 38 TVDWKVDGTPVTA 50
Database: scop70_1_75
Posted date: Mar 27, 2010 6:21 PM
Number of letters in database: 2,407,596
Number of sequences in database: 13,730
Lambda K H
0.315 0.136 0.423
Gapped
Lambda K H
0.267 0.0491 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 13730
Number of Hits to DB: 488,449
Number of extensions: 21545
Number of successful extensions: 179
Number of sequences better than 10.0: 1
Number of HSP's gapped: 158
Number of HSP's successfully gapped: 113
Length of query: 119
Length of database: 2,407,596
Length adjustment: 74
Effective length of query: 45
Effective length of database: 1,391,576
Effective search space: 62620920
Effective search space used: 62620920
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (22.0 bits)
S2: 47 (22.5 bits)