BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy12726
(558 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|A2A4P0|DHX8_MOUSE ATP-dependent RNA helicase DHX8 OS=Mus musculus GN=Dhx8 PE=2 SV=1
Length = 1244
Score = 424 bits (1089), Expect = e-117, Method: Compositional matrix adjust.
Identities = 194/223 (86%), Positives = 211/223 (94%)
Query: 11 QMAEFPLEPNLSKMLIMSVHLQCSDEVLTIVSMLSVQNVFYRPKDKQALADQKKAKFNQM 70
+MAEFPLEP L KMLIMSVHL CS+E+LTIVSMLSVQNVFYRPKDKQALADQKKAKF+Q
Sbjct: 1003 RMAEFPLEPMLCKMLIMSVHLGCSEEMLTIVSMLSVQNVFYRPKDKQALADQKKAKFHQT 1062
Query: 71 EGDHITLLAVYNSWRNNKFSNAWCYENFVQIRTLKRAQDVRKQLLGIMDRHKLDVVSAGK 130
EGDH+TLLAVYNSW+NNKFSN WCYENF+Q R+L+RAQD+RKQ+LGIMDRHKLDVVS GK
Sbjct: 1063 EGDHLTLLAVYNSWKNNKFSNPWCYENFIQARSLRRAQDIRKQMLGIMDRHKLDVVSCGK 1122
Query: 131 NTVRVQKAVCSGFFRNAAKKDPQEGYRTLVDSQVVYIHPSSALFNRQPEWVIYHELVQTT 190
+TVRVQKA+CSGFFRNAAKKDPQEGYRTL+D QVVYIHPSSALFNRQPEWV+YHELV TT
Sbjct: 1123 STVRVQKAICSGFFRNAAKKDPQEGYRTLIDQQVVYIHPSSALFNRQPEWVVYHELVLTT 1182
Query: 191 KEYMREVTSIDPKWLVEFAPAFFKFSDPTKLSKFKKNQRLEPL 233
KEYMREVT+IDP+WLVEFAPAFFK SDPTKLSK KK QRLEPL
Sbjct: 1183 KEYMREVTTIDPRWLVEFAPAFFKVSDPTKLSKQKKQQRLEPL 1225
Score = 275 bits (702), Expect = 8e-73, Method: Compositional matrix adjust.
Identities = 124/139 (89%), Positives = 133/139 (95%)
Query: 330 DVRKQLLGIMDRHKLDVVSAGKNTVRVQKAVCSGFFRNAAKKDPQEGYRTLVDSQVVYIH 389
D+RKQ+LGIMDRHKLDVVS GK+TVRVQKA+CSGFFRNAAKKDPQEGYRTL+D QVVYIH
Sbjct: 1101 DIRKQMLGIMDRHKLDVVSCGKSTVRVQKAICSGFFRNAAKKDPQEGYRTLIDQQVVYIH 1160
Query: 390 PSSALFNRQPEWVIYHELVQTTKEYMREVTSIDPKWLVEFAPAFFKFSDPTKLSKFKKNQ 449
PSSALFNRQPEWV+YHELV TTKEYMREVT+IDP+WLVEFAPAFFK SDPTKLSK KK Q
Sbjct: 1161 PSSALFNRQPEWVVYHELVLTTKEYMREVTTIDPRWLVEFAPAFFKVSDPTKLSKQKKQQ 1220
Query: 450 RLEPLYNKYEEPNAWRISR 468
RLEPLYN+YEEPNAWRISR
Sbjct: 1221 RLEPLYNRYEEPNAWRISR 1239
Score = 155 bits (391), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 71/88 (80%), Positives = 83/88 (94%)
Query: 244 GLLKQAVKKRPEIKLIVTSATLDAVKFSSYFFEAPIFTIPGRTFPVEVLYTKEPETDYLD 303
GLLK+ V+KR ++KLIVTSATLDAVKFS YF+EAPIFTIPGRT+PVE+LYTKEPETDYLD
Sbjct: 723 GLLKKTVQKRQDMKLIVTSATLDAVKFSQYFYEAPIFTIPGRTYPVEILYTKEPETDYLD 782
Query: 304 ASLITVMQIHLREPPGDVLLFLTGKLDV 331
ASLITVMQIHL EPPGD+L+FLTG+ ++
Sbjct: 783 ASLITVMQIHLTEPPGDILVFLTGQEEI 810
Score = 150 bits (378), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 71/76 (93%), Positives = 74/76 (97%)
Query: 467 SREEIDTACEILYERMKSLGPDVPELIILPVYSALPSEMQTRIFEAAPPGSRKVVIATNI 526
+EEIDTACEILYERMKSLGPDVPELIILPVYSALPSEMQTRIF+ APPGSRKVVIATNI
Sbjct: 806 GQEEIDTACEILYERMKSLGPDVPELIILPVYSALPSEMQTRIFDPAPPGSRKVVIATNI 865
Query: 527 AETSLTIDGIFYVVDP 542
AETSLTIDGI+YVVDP
Sbjct: 866 AETSLTIDGIYYVVDP 881
>sp|Q14562|DHX8_HUMAN ATP-dependent RNA helicase DHX8 OS=Homo sapiens GN=DHX8 PE=1 SV=1
Length = 1220
Score = 424 bits (1089), Expect = e-117, Method: Compositional matrix adjust.
Identities = 194/223 (86%), Positives = 211/223 (94%)
Query: 11 QMAEFPLEPNLSKMLIMSVHLQCSDEVLTIVSMLSVQNVFYRPKDKQALADQKKAKFNQM 70
+MAEFPLEP L KMLIMSVHL CS+E+LTIVSMLSVQNVFYRPKDKQALADQKKAKF+Q
Sbjct: 979 RMAEFPLEPMLCKMLIMSVHLGCSEEMLTIVSMLSVQNVFYRPKDKQALADQKKAKFHQT 1038
Query: 71 EGDHITLLAVYNSWRNNKFSNAWCYENFVQIRTLKRAQDVRKQLLGIMDRHKLDVVSAGK 130
EGDH+TLLAVYNSW+NNKFSN WCYENF+Q R+L+RAQD+RKQ+LGIMDRHKLDVVS GK
Sbjct: 1039 EGDHLTLLAVYNSWKNNKFSNPWCYENFIQARSLRRAQDIRKQMLGIMDRHKLDVVSCGK 1098
Query: 131 NTVRVQKAVCSGFFRNAAKKDPQEGYRTLVDSQVVYIHPSSALFNRQPEWVIYHELVQTT 190
+TVRVQKA+CSGFFRNAAKKDPQEGYRTL+D QVVYIHPSSALFNRQPEWV+YHELV TT
Sbjct: 1099 STVRVQKAICSGFFRNAAKKDPQEGYRTLIDQQVVYIHPSSALFNRQPEWVVYHELVLTT 1158
Query: 191 KEYMREVTSIDPKWLVEFAPAFFKFSDPTKLSKFKKNQRLEPL 233
KEYMREVT+IDP+WLVEFAPAFFK SDPTKLSK KK QRLEPL
Sbjct: 1159 KEYMREVTTIDPRWLVEFAPAFFKVSDPTKLSKQKKQQRLEPL 1201
Score = 275 bits (702), Expect = 8e-73, Method: Compositional matrix adjust.
Identities = 124/139 (89%), Positives = 133/139 (95%)
Query: 330 DVRKQLLGIMDRHKLDVVSAGKNTVRVQKAVCSGFFRNAAKKDPQEGYRTLVDSQVVYIH 389
D+RKQ+LGIMDRHKLDVVS GK+TVRVQKA+CSGFFRNAAKKDPQEGYRTL+D QVVYIH
Sbjct: 1077 DIRKQMLGIMDRHKLDVVSCGKSTVRVQKAICSGFFRNAAKKDPQEGYRTLIDQQVVYIH 1136
Query: 390 PSSALFNRQPEWVIYHELVQTTKEYMREVTSIDPKWLVEFAPAFFKFSDPTKLSKFKKNQ 449
PSSALFNRQPEWV+YHELV TTKEYMREVT+IDP+WLVEFAPAFFK SDPTKLSK KK Q
Sbjct: 1137 PSSALFNRQPEWVVYHELVLTTKEYMREVTTIDPRWLVEFAPAFFKVSDPTKLSKQKKQQ 1196
Query: 450 RLEPLYNKYEEPNAWRISR 468
RLEPLYN+YEEPNAWRISR
Sbjct: 1197 RLEPLYNRYEEPNAWRISR 1215
Score = 155 bits (391), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 71/88 (80%), Positives = 83/88 (94%)
Query: 244 GLLKQAVKKRPEIKLIVTSATLDAVKFSSYFFEAPIFTIPGRTFPVEVLYTKEPETDYLD 303
GLLK+ V+KR ++KLIVTSATLDAVKFS YF+EAPIFTIPGRT+PVE+LYTKEPETDYLD
Sbjct: 699 GLLKKTVQKRQDMKLIVTSATLDAVKFSQYFYEAPIFTIPGRTYPVEILYTKEPETDYLD 758
Query: 304 ASLITVMQIHLREPPGDVLLFLTGKLDV 331
ASLITVMQIHL EPPGD+L+FLTG+ ++
Sbjct: 759 ASLITVMQIHLTEPPGDILVFLTGQEEI 786
Score = 150 bits (379), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 71/76 (93%), Positives = 74/76 (97%)
Query: 467 SREEIDTACEILYERMKSLGPDVPELIILPVYSALPSEMQTRIFEAAPPGSRKVVIATNI 526
+EEIDTACEILYERMKSLGPDVPELIILPVYSALPSEMQTRIF+ APPGSRKVVIATNI
Sbjct: 782 GQEEIDTACEILYERMKSLGPDVPELIILPVYSALPSEMQTRIFDPAPPGSRKVVIATNI 841
Query: 527 AETSLTIDGIFYVVDP 542
AETSLTIDGI+YVVDP
Sbjct: 842 AETSLTIDGIYYVVDP 857
>sp|Q09530|MOG5_CAEEL Probable pre-mRNA-splicing factor ATP-dependent RNA helicase mog-5
OS=Caenorhabditis elegans GN=mog-5 PE=1 SV=1
Length = 1200
Score = 385 bits (988), Expect = e-106, Method: Compositional matrix adjust.
Identities = 172/232 (74%), Positives = 204/232 (87%)
Query: 2 DSLVVTPISQMAEFPLEPNLSKMLIMSVHLQCSDEVLTIVSMLSVQNVFYRPKDKQALAD 61
D L+ +MAEFPLEP+LSK+LIMSV L CS+EVLTIV+ML+VQN+FYRPK+KQ AD
Sbjct: 945 DGLLTKLGRRMAEFPLEPSLSKLLIMSVDLGCSEEVLTIVAMLNVQNIFYRPKEKQDHAD 1004
Query: 62 QKKAKFNQMEGDHITLLAVYNSWRNNKFSNAWCYENFVQIRTLKRAQDVRKQLLGIMDRH 121
QKKAKF+Q EGDH+TLLAVYNSW+N+ FS WC+ENF+Q+R++KRAQD+RKQLLGIMDRH
Sbjct: 1005 QKKAKFHQPEGDHLTLLAVYNSWKNHHFSQPWCFENFIQVRSMKRAQDIRKQLLGIMDRH 1064
Query: 122 KLDVVSAGKNTVRVQKAVCSGFFRNAAKKDPQEGYRTLVDSQVVYIHPSSALFNRQPEWV 181
KL +VS G++ RVQKA+CSGFFRNAAK+DPQEGYRTL D Q VYIHPSSA F +QPEWV
Sbjct: 1065 KLLMVSCGRDVSRVQKAICSGFFRNAAKRDPQEGYRTLTDGQNVYIHPSSACFQQQPEWV 1124
Query: 182 IYHELVQTTKEYMREVTSIDPKWLVEFAPAFFKFSDPTKLSKFKKNQRLEPL 233
+YHELV TTKEYMREVT+IDPKWLVEFAP+FFK D TKLS FK+NQ+++PL
Sbjct: 1125 VYHELVMTTKEYMREVTAIDPKWLVEFAPSFFKIGDSTKLSTFKRNQKIDPL 1176
Score = 242 bits (617), Expect = 6e-63, Method: Compositional matrix adjust.
Identities = 105/139 (75%), Positives = 123/139 (88%)
Query: 330 DVRKQLLGIMDRHKLDVVSAGKNTVRVQKAVCSGFFRNAAKKDPQEGYRTLVDSQVVYIH 389
D+RKQLLGIMDRHKL +VS G++ RVQKA+CSGFFRNAAK+DPQEGYRTL D Q VYIH
Sbjct: 1052 DIRKQLLGIMDRHKLLMVSCGRDVSRVQKAICSGFFRNAAKRDPQEGYRTLTDGQNVYIH 1111
Query: 390 PSSALFNRQPEWVIYHELVQTTKEYMREVTSIDPKWLVEFAPAFFKFSDPTKLSKFKKNQ 449
PSSA F +QPEWV+YHELV TTKEYMREVT+IDPKWLVEFAP+FFK D TKLS FK+NQ
Sbjct: 1112 PSSACFQQQPEWVVYHELVMTTKEYMREVTAIDPKWLVEFAPSFFKIGDSTKLSTFKRNQ 1171
Query: 450 RLEPLYNKYEEPNAWRISR 468
+++PL++KY + NAWRI+R
Sbjct: 1172 KIDPLFDKYADANAWRITR 1190
Score = 152 bits (383), Expect = 8e-36, Method: Compositional matrix adjust.
Identities = 71/101 (70%), Positives = 85/101 (84%)
Query: 231 EPLQRTNRISFPPGLLKQAVKKRPEIKLIVTSATLDAVKFSSYFFEAPIFTIPGRTFPVE 290
E +RT GLLK A +KRPE+KLI+TSATLD+VKFS YF EAPIFTIPGRTFPVE
Sbjct: 661 EAHERTIHTDVLFGLLKAAARKRPELKLIITSATLDSVKFSEYFLEAPIFTIPGRTFPVE 720
Query: 291 VLYTKEPETDYLDASLITVMQIHLREPPGDVLLFLTGKLDV 331
+LYT+EPE+DYL+A+ ITVMQIHL EPPGDVL+FLTG+ ++
Sbjct: 721 ILYTREPESDYLEAAHITVMQIHLTEPPGDVLVFLTGQEEI 761
Score = 143 bits (361), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 66/76 (86%), Positives = 71/76 (93%)
Query: 467 SREEIDTACEILYERMKSLGPDVPELIILPVYSALPSEMQTRIFEAAPPGSRKVVIATNI 526
+EEIDT+CE+LYERMKS+GPDVPELIILPVY ALPSEMQTRIF+ AP G RKVVIATNI
Sbjct: 757 GQEEIDTSCEVLYERMKSMGPDVPELIILPVYGALPSEMQTRIFDPAPAGKRKVVIATNI 816
Query: 527 AETSLTIDGIFYVVDP 542
AETSLTIDGIFYVVDP
Sbjct: 817 AETSLTIDGIFYVVDP 832
>sp|Q54F05|DHX8_DICDI ATP-dependent RNA helicase dhx8 OS=Dictyostelium discoideum GN=dhx8
PE=3 SV=1
Length = 1160
Score = 368 bits (944), Expect = e-101, Method: Compositional matrix adjust.
Identities = 166/223 (74%), Positives = 196/223 (87%)
Query: 11 QMAEFPLEPNLSKMLIMSVHLQCSDEVLTIVSMLSVQNVFYRPKDKQALADQKKAKFNQM 70
+MAEFPL+P LSKMLI SV L CSDE+LT+V+MLSVQNVFYRPK+KQALADQKKAKF Q
Sbjct: 922 KMAEFPLDPQLSKMLIASVDLGCSDEILTVVAMLSVQNVFYRPKEKQALADQKKAKFFQP 981
Query: 71 EGDHITLLAVYNSWRNNKFSNAWCYENFVQIRTLKRAQDVRKQLLGIMDRHKLDVVSAGK 130
EGDH+TLL VY SW+N+KFSN WC+ENFVQ R+L+RAQDVRKQL+ IMDR+KLD++SAG+
Sbjct: 982 EGDHLTLLNVYESWKNSKFSNPWCFENFVQARSLRRAQDVRKQLITIMDRYKLDIISAGR 1041
Query: 131 NTVRVQKAVCSGFFRNAAKKDPQEGYRTLVDSQVVYIHPSSALFNRQPEWVIYHELVQTT 190
N ++QKA+CSGFF NA+KKDP EGY+TLV+ Q VYIHPSS LFNR P+WVIYHELV TT
Sbjct: 1042 NYTKIQKAICSGFFANASKKDPNEGYKTLVEGQPVYIHPSSTLFNRNPDWVIYHELVMTT 1101
Query: 191 KEYMREVTSIDPKWLVEFAPAFFKFSDPTKLSKFKKNQRLEPL 233
KEYMREV +IDPKWLVE AP FFK SDP K+SK K+ +++EPL
Sbjct: 1102 KEYMREVCTIDPKWLVELAPKFFKTSDPNKISKRKRKEKIEPL 1144
Score = 228 bits (580), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 99/139 (71%), Positives = 120/139 (86%)
Query: 330 DVRKQLLGIMDRHKLDVVSAGKNTVRVQKAVCSGFFRNAAKKDPQEGYRTLVDSQVVYIH 389
DVRKQL+ IMDR+KLD++SAG+N ++QKA+CSGFF NA+KKDP EGY+TLV+ Q VYIH
Sbjct: 1020 DVRKQLITIMDRYKLDIISAGRNYTKIQKAICSGFFANASKKDPNEGYKTLVEGQPVYIH 1079
Query: 390 PSSALFNRQPEWVIYHELVQTTKEYMREVTSIDPKWLVEFAPAFFKFSDPTKLSKFKKNQ 449
PSS LFNR P+WVIYHELV TTKEYMREV +IDPKWLVE AP FFK SDP K+SK K+ +
Sbjct: 1080 PSSTLFNRNPDWVIYHELVMTTKEYMREVCTIDPKWLVELAPKFFKTSDPNKISKRKRKE 1139
Query: 450 RLEPLYNKYEEPNAWRISR 468
++EPLY+KY +PNAWR S+
Sbjct: 1140 KIEPLYDKYNDPNAWRPSK 1158
Score = 140 bits (353), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 65/95 (68%), Positives = 81/95 (85%), Gaps = 2/95 (2%)
Query: 244 GLLKQAVKKRPEIKLIVTSATLDAVKFSSYFFEAPIFTIPGRTFPVEVLYTKEPETDYLD 303
GLLKQA+++RPE+K+++TSATL+A KFS YF A +F IPGRTFPV++ YTK+PE DYLD
Sbjct: 642 GLLKQALQRRPELKVLITSATLEAEKFSKYFMNAQLFIIPGRTFPVDIRYTKDPEADYLD 701
Query: 304 ASLITVMQIHLREPPGDVLLFLTGK--LDVRKQLL 336
ASLITVMQIHL EPPGD+LLFLTG+ +D Q+L
Sbjct: 702 ASLITVMQIHLSEPPGDILLFLTGQEEIDAACQIL 736
Score = 140 bits (352), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 65/76 (85%), Positives = 72/76 (94%)
Query: 467 SREEIDTACEILYERMKSLGPDVPELIILPVYSALPSEMQTRIFEAAPPGSRKVVIATNI 526
+EEID AC+ILYERMKSLG +VP+LIILPVYSALPSEMQT+IFE APPGSRKVVIATNI
Sbjct: 725 GQEEIDAACQILYERMKSLGSNVPDLIILPVYSALPSEMQTKIFEPAPPGSRKVVIATNI 784
Query: 527 AETSLTIDGIFYVVDP 542
AETSLTIDGI+YV+DP
Sbjct: 785 AETSLTIDGIYYVIDP 800
>sp|Q38953|DHX8_ARATH Probable pre-mRNA-splicing factor ATP-dependent RNA helicase
OS=Arabidopsis thaliana GN=At3g26560 PE=1 SV=2
Length = 1168
Score = 347 bits (889), Expect = 2e-94, Method: Compositional matrix adjust.
Identities = 155/223 (69%), Positives = 191/223 (85%)
Query: 11 QMAEFPLEPNLSKMLIMSVHLQCSDEVLTIVSMLSVQNVFYRPKDKQALADQKKAKFNQM 70
+MAEFPLEP LSKML+ SV L CSDE+LT+++M+ N+FYRP++KQA ADQK+AKF Q
Sbjct: 929 KMAEFPLEPPLSKMLLASVDLGCSDEILTMIAMIQTGNIFYRPREKQAQADQKRAKFFQP 988
Query: 71 EGDHITLLAVYNSWRNNKFSNAWCYENFVQIRTLKRAQDVRKQLLGIMDRHKLDVVSAGK 130
EGDH+TLLAVY +W+ FS WC+ENF+Q R+L+RAQDVRKQLL IMD++KLDVV+AGK
Sbjct: 989 EGDHLTLLAVYEAWKAKNFSGPWCFENFIQSRSLRRAQDVRKQLLSIMDKYKLDVVTAGK 1048
Query: 131 NTVRVQKAVCSGFFRNAAKKDPQEGYRTLVDSQVVYIHPSSALFNRQPEWVIYHELVQTT 190
N +++KA+ +GFF + A+KDPQEGYRTLV++Q VYIHPSSALF RQP+WVIYH+LV TT
Sbjct: 1049 NFTKIRKAITAGFFFHGARKDPQEGYRTLVENQPVYIHPSSALFQRQPDWVIYHDLVMTT 1108
Query: 191 KEYMREVTSIDPKWLVEFAPAFFKFSDPTKLSKFKKNQRLEPL 233
KEYMREVT IDPKWLVE AP FFK SDPTK+SK K+ +R+EPL
Sbjct: 1109 KEYMREVTVIDPKWLVELAPRFFKVSDPTKMSKRKRQERIEPL 1151
Score = 227 bits (578), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 100/139 (71%), Positives = 123/139 (88%)
Query: 330 DVRKQLLGIMDRHKLDVVSAGKNTVRVQKAVCSGFFRNAAKKDPQEGYRTLVDSQVVYIH 389
DVRKQLL IMD++KLDVV+AGKN +++KA+ +GFF + A+KDPQEGYRTLV++Q VYIH
Sbjct: 1027 DVRKQLLSIMDKYKLDVVTAGKNFTKIRKAITAGFFFHGARKDPQEGYRTLVENQPVYIH 1086
Query: 390 PSSALFNRQPEWVIYHELVQTTKEYMREVTSIDPKWLVEFAPAFFKFSDPTKLSKFKKNQ 449
PSSALF RQP+WVIYH+LV TTKEYMREVT IDPKWLVE AP FFK SDPTK+SK K+ +
Sbjct: 1087 PSSALFQRQPDWVIYHDLVMTTKEYMREVTVIDPKWLVELAPRFFKVSDPTKMSKRKRQE 1146
Query: 450 RLEPLYNKYEEPNAWRISR 468
R+EPLY++Y EPN+WR+S+
Sbjct: 1147 RIEPLYDRYHEPNSWRLSK 1165
Score = 140 bits (352), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 71/122 (58%), Positives = 89/122 (72%), Gaps = 4/122 (3%)
Query: 231 EPLQRTNRISFPPGLLKQAVKKRPEIKLIVTSATLDAVKFSSYFFEAPIFTIPGRTFPVE 290
E +RT GLLK+ +K+R +++LIVTSATLDA KFS YFF IFTIPGRTFPVE
Sbjct: 636 EAHERTIHTDVLFGLLKKLMKRRLDLRLIVTSATLDAEKFSGYFFNCNIFTIPGRTFPVE 695
Query: 291 VLYTKEPETDYLDASLITVMQIHLREPPGDVLLFLTGKLDVRKQLLGIMDRHKLDVVSAG 350
+LYTK+PETDYLDA+LITV+QIHL EP GD+L+FLTG+ ++ + +R K G
Sbjct: 696 ILYTKQPETDYLDAALITVLQIHLTEPEGDILVFLTGQEEIDSACQSLYERMK----GLG 751
Query: 351 KN 352
KN
Sbjct: 752 KN 753
Score = 130 bits (328), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 60/76 (78%), Positives = 68/76 (89%)
Query: 467 SREEIDTACEILYERMKSLGPDVPELIILPVYSALPSEMQTRIFEAAPPGSRKVVIATNI 526
+EEID+AC+ LYERMK LG +VPELIILPVYSALPSEMQ+RIF+ PPG RKVV+ATNI
Sbjct: 732 GQEEIDSACQSLYERMKGLGKNVPELIILPVYSALPSEMQSRIFDPPPPGKRKVVVATNI 791
Query: 527 AETSLTIDGIFYVVDP 542
AE SLTIDGI+YVVDP
Sbjct: 792 AEASLTIDGIYYVVDP 807
>sp|O42643|PRP22_SCHPO Pre-mRNA-splicing factor ATP-dependent RNA helicase prp22
OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843)
GN=prp22 PE=1 SV=1
Length = 1168
Score = 275 bits (704), Expect = 5e-73, Method: Compositional matrix adjust.
Identities = 122/234 (52%), Positives = 181/234 (77%), Gaps = 2/234 (0%)
Query: 2 DSLVVTPIS-QMAEFPLEPNLSKMLIMSVHLQCSDEVLTIVSMLSVQNVFYRPKDKQALA 60
D ++TP+ +MA+FP+EP LSK+LI SV L CS+E+L+I++MLSV N++ RP++KQ A
Sbjct: 915 DEGLLTPLGRKMADFPMEPQLSKVLITSVELGCSEEMLSIIAMLSVPNIWSRPREKQQEA 974
Query: 61 DQKKAKFNQMEGDHITLLAVYNSWRNNKFSNAWCYENFVQIRTLKRAQDVRKQLLGIMDR 120
D+++A+F E DH+TLL VY +W+ N+ S+ WCYE+++Q R ++RA+DVRKQL+ +MDR
Sbjct: 975 DRQRAQFANPESDHLTLLNVYTTWKMNRCSDNWCYEHYIQARGMRRAEDVRKQLIRLMDR 1034
Query: 121 HKLDVVSAGKNTVRVQKAVCSGFFRNAAKKDPQEG-YRTLVDSQVVYIHPSSALFNRQPE 179
++ VVS G+ + +A+CSG+F N AK+D EG Y+T+V++ VY+HPS LF + E
Sbjct: 1035 YRHPVVSCGRKRELILRALCSGYFTNVAKRDSHEGCYKTIVENAPVYMHPSGVLFGKAAE 1094
Query: 180 WVIYHELVQTTKEYMREVTSIDPKWLVEFAPAFFKFSDPTKLSKFKKNQRLEPL 233
WVIYHEL+QT+KEYM V++++PKWLVE AP FFKF++ ++SK KKN ++ PL
Sbjct: 1095 WVIYHELIQTSKEYMHTVSTVNPKWLVEVAPTFFKFANANQVSKTKKNLKVLPL 1148
Score = 176 bits (445), Expect = 5e-43, Method: Compositional matrix adjust.
Identities = 76/141 (53%), Positives = 110/141 (78%), Gaps = 1/141 (0%)
Query: 330 DVRKQLLGIMDRHKLDVVSAGKNTVRVQKAVCSGFFRNAAKKDPQEG-YRTLVDSQVVYI 388
DVRKQL+ +MDR++ VVS G+ + +A+CSG+F N AK+D EG Y+T+V++ VY+
Sbjct: 1023 DVRKQLIRLMDRYRHPVVSCGRKRELILRALCSGYFTNVAKRDSHEGCYKTIVENAPVYM 1082
Query: 389 HPSSALFNRQPEWVIYHELVQTTKEYMREVTSIDPKWLVEFAPAFFKFSDPTKLSKFKKN 448
HPS LF + EWVIYHEL+QT+KEYM V++++PKWLVE AP FFKF++ ++SK KKN
Sbjct: 1083 HPSGVLFGKAAEWVIYHELIQTSKEYMHTVSTVNPKWLVEVAPTFFKFANANQVSKTKKN 1142
Query: 449 QRLEPLYNKYEEPNAWRISRE 469
++ PLYN++E+P+ WRIS++
Sbjct: 1143 LKVLPLYNRFEKPDEWRISKQ 1163
Score = 142 bits (358), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 64/101 (63%), Positives = 84/101 (83%)
Query: 244 GLLKQAVKKRPEIKLIVTSATLDAVKFSSYFFEAPIFTIPGRTFPVEVLYTKEPETDYLD 303
GLLK V KRP++KLIVTSATLDA +FSSYF++ PIFTIPGR++PVE++YTK+PE DYLD
Sbjct: 645 GLLKGTVLKRPDLKLIVTSATLDAERFSSYFYKCPIFTIPGRSYPVEIMYTKQPEADYLD 704
Query: 304 ASLITVMQIHLREPPGDVLLFLTGKLDVRKQLLGIMDRHKL 344
A+L+TVMQIHL E PGD+L+FLTG+ ++ + +R K+
Sbjct: 705 AALMTVMQIHLSEGPGDILVFLTGQEEIDTSCEILYERSKM 745
Score = 134 bits (336), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 62/76 (81%), Positives = 69/76 (90%)
Query: 467 SREEIDTACEILYERMKSLGPDVPELIILPVYSALPSEMQTRIFEAAPPGSRKVVIATNI 526
+EEIDT+CEILYER K LG +PEL+ILPVYSALPSE+Q+RIFE APPG RKVVIATNI
Sbjct: 728 GQEEIDTSCEILYERSKMLGDSIPELVILPVYSALPSEIQSRIFEPAPPGGRKVVIATNI 787
Query: 527 AETSLTIDGIFYVVDP 542
AETSLTIDGI+YVVDP
Sbjct: 788 AETSLTIDGIYYVVDP 803
>sp|P24384|PRP22_YEAST Pre-mRNA-splicing factor ATP-dependent RNA helicase PRP22
OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c)
GN=PRP22 PE=1 SV=1
Length = 1145
Score = 229 bits (583), Expect = 5e-59, Method: Compositional matrix adjust.
Identities = 109/224 (48%), Positives = 155/224 (69%), Gaps = 2/224 (0%)
Query: 11 QMAEFPLEPNLSKMLIMSVHLQCSDEVLTIVSMLSVQNVFYRPKDKQALADQKKAKFNQM 70
+M+ FP++P LS+ L+ SV QCSDE++TI+SMLSVQNVFYRPKD+Q AD KKAKF+
Sbjct: 897 EMSLFPMDPTLSRSLLSSVDNQCSDEIVTIISMLSVQNVFYRPKDRQLEADSKKAKFHHP 956
Query: 71 EGDHITLLAVYNSWRNNKFSNAWCYENFVQIRTLKRAQDVRKQLLGIMDRHKLDVVSAGK 130
GDH+TLL VY W+ +S +C NF+ R LKRA+DV+ Q+ I + L ++S
Sbjct: 957 YGDHLTLLNVYTRWQQANYSEQYCKTNFLHFRHLKRARDVKSQISMIFKKIGLKLISCHS 1016
Query: 131 NTVRVQKAVCSGFFRNAAKKDPQEGYRTLVDSQVVYIHPSSALFNRQPEWVIYHELVQTT 190
+ ++K SGFF NAAK+D Q GY+T+ V IHPSS+L+ ++ E+V+YH +V T+
Sbjct: 1017 DPDLIRKTFVSGFFMNAAKRDSQVGYKTINGGTEVGIHPSSSLYGKEYEYVMYHSIVLTS 1076
Query: 191 KEYMREVTSIDPKWLVEFAPAFFKFSDPTKLSKFKKNQRLEPLQ 234
+EYM +VTSI+P+WL+E AP F+K D S+ +K ++ PL
Sbjct: 1077 REYMSQVTSIEPQWLLEVAPHFYKAGDAE--SQSRKKAKIIPLH 1118
Score = 122 bits (307), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 59/139 (42%), Positives = 94/139 (67%), Gaps = 3/139 (2%)
Query: 330 DVRKQLLGIMDRHKLDVVSAGKNTVRVQKAVCSGFFRNAAKKDPQEGYRTLVDSQVVYIH 389
DV+ Q+ I + L ++S + ++K SGFF NAAK+D Q GY+T+ V IH
Sbjct: 995 DVKSQISMIFKKIGLKLISCHSDPDLIRKTFVSGFFMNAAKRDSQVGYKTINGGTEVGIH 1054
Query: 390 PSSALFNRQPEWVIYHELVQTTKEYMREVTSIDPKWLVEFAPAFFKFSDPTKLSKFKKNQ 449
PSS+L+ ++ E+V+YH +V T++EYM +VTSI+P+WL+E AP F+K D S+ +K
Sbjct: 1055 PSSSLYGKEYEYVMYHSIVLTSREYMSQVTSIEPQWLLEVAPHFYKAGDAE--SQSRKKA 1112
Query: 450 RLEPLYNKY-EEPNAWRIS 467
++ PL+NK+ ++ N+WR+S
Sbjct: 1113 KIIPLHNKFAKDQNSWRLS 1131
Score = 122 bits (306), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 55/76 (72%), Positives = 67/76 (88%)
Query: 467 SREEIDTACEILYERMKSLGPDVPELIILPVYSALPSEMQTRIFEAAPPGSRKVVIATNI 526
+EEID+ CEILY+R+K+LG + EL+ILPVYSALPSE+Q++IFE P GSRKVV ATNI
Sbjct: 700 GQEEIDSCCEILYDRVKTLGDSIGELLILPVYSALPSEIQSKIFEPTPKGSRKVVFATNI 759
Query: 527 AETSLTIDGIFYVVDP 542
AETS+TIDGI+YVVDP
Sbjct: 760 AETSITIDGIYYVVDP 775
Score = 118 bits (295), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 61/127 (48%), Positives = 85/127 (66%), Gaps = 1/127 (0%)
Query: 217 DPTKLSKFKKNQRLEPLQRTNRISFPPGLLKQAVKKRPEIKLIVTSATLDAVKFSSYFFE 276
DP ++SK+ E +RT LLK+A KRPE+K+IVTSATL++ KFS YF
Sbjct: 591 DP-EMSKYSVIMLDEAHERTVATDVLFALLKKAAIKRPELKVIVTSATLNSAKFSEYFLN 649
Query: 277 APIFTIPGRTFPVEVLYTKEPETDYLDASLITVMQIHLREPPGDVLLFLTGKLDVRKQLL 336
PI IPG+TFPVEVLY++ P+ DY++A+L V+ IH+ E PGD+L+FLTG+ ++
Sbjct: 650 CPIINIPGKTFPVEVLYSQTPQMDYIEAALDCVIDIHINEGPGDILVFLTGQEEIDSCCE 709
Query: 337 GIMDRHK 343
+ DR K
Sbjct: 710 ILYDRVK 716
>sp|O60231|DHX16_HUMAN Putative pre-mRNA-splicing factor ATP-dependent RNA helicase DHX16
OS=Homo sapiens GN=DHX16 PE=1 SV=2
Length = 1041
Score = 222 bits (565), Expect = 6e-57, Method: Compositional matrix adjust.
Identities = 102/218 (46%), Positives = 151/218 (69%), Gaps = 5/218 (2%)
Query: 5 VVTPISQMAEFPLEPNLSKMLIMSVHLQCSDEVLTIVSMLSVQN-VFYRPKDKQALADQK 63
+ T +MAE P++P LSKM++ S CS+E+LT+ +MLSV N +FYRPKDK AD
Sbjct: 808 LTTSGRKMAELPVDPMLSKMILASEKYSCSEEILTVAAMLSVNNSIFYRPKDKVVHADNA 867
Query: 64 KAKFNQMEGDHITLLAVYNSWRNNKFSNAWCYENFVQIRTLKRAQDVRKQLLGIMDRHKL 123
+ F GDH+ LL VY W + +S+ WCYENFVQ R+++RA+DVR+QL G+++R ++
Sbjct: 868 RVNFFLPGGDHLVLLNVYTQWAESGYSSQWCYENFVQFRSMRRARDVREQLEGLLERVEV 927
Query: 124 DVVSAGKNTVRVQKAVCSGFFRNAAKKDPQEGYRTLVDSQVVYIHPSSALFNRQPEWVIY 183
+ S + +RV+KA+ +G+F + A+ + GYRT+ Q V+IHP+S+LF +QP W++Y
Sbjct: 928 GLSSCQGDYIRVRKAITAGYFYHTARL-TRSGYRTVKQQQTVFIHPNSSLFEQQPRWLLY 986
Query: 184 HELVQTTKEYMREVTSIDPKWLVEFAPAFFK---FSDP 218
HELV TTKE+MR+V I+ WL+E AP ++K DP
Sbjct: 987 HELVLTTKEFMRQVLEIESSWLLEVAPHYYKAKELEDP 1024
Score = 120 bits (301), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 52/111 (46%), Positives = 79/111 (71%)
Query: 231 EPLQRTNRISFPPGLLKQAVKKRPEIKLIVTSATLDAVKFSSYFFEAPIFTIPGRTFPVE 290
E +RT GL+K + RPE+K++V SAT+D +FS++F +AP+F IPGR FPV+
Sbjct: 521 EAHERTLHTDILFGLIKDVARFRPELKVLVASATMDTARFSTFFDDAPVFRIPGRRFPVD 580
Query: 291 VLYTKEPETDYLDASLITVMQIHLREPPGDVLLFLTGKLDVRKQLLGIMDR 341
+ YTK PE DYL+A +++V+QIH+ +PPGD+L+FLTG+ ++ + DR
Sbjct: 581 IFYTKAPEADYLEACVVSVLQIHVTQPPGDILVFLTGQEEIEAACEMLQDR 631
Score = 112 bits (280), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 51/113 (45%), Positives = 80/113 (70%), Gaps = 4/113 (3%)
Query: 330 DVRKQLLGIMDRHKLDVVSAGKNTVRVQKAVCSGFFRNAAKKDPQEGYRTLVDSQVVYIH 389
DVR+QL G+++R ++ + S + +RV+KA+ +G+F + A+ + GYRT+ Q V+IH
Sbjct: 913 DVREQLEGLLERVEVGLSSCQGDYIRVRKAITAGYFYHTARL-TRSGYRTVKQQQTVFIH 971
Query: 390 PSSALFNRQPEWVIYHELVQTTKEYMREVTSIDPKWLVEFAPAFFK---FSDP 439
P+S+LF +QP W++YHELV TTKE+MR+V I+ WL+E AP ++K DP
Sbjct: 972 PNSSLFEQQPRWLLYHELVLTTKEFMRQVLEIESSWLLEVAPHYYKAKELEDP 1024
Score = 109 bits (273), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 47/76 (61%), Positives = 63/76 (82%)
Query: 467 SREEIDTACEILYERMKSLGPDVPELIILPVYSALPSEMQTRIFEAAPPGSRKVVIATNI 526
+EEI+ ACE+L +R + LG + EL++LP+Y+ LPS+MQ RIF+ PPG+RKVV+ATNI
Sbjct: 617 GQEEIEAACEMLQDRCRRLGSKIRELLVLPIYANLPSDMQARIFQPTPPGARKVVVATNI 676
Query: 527 AETSLTIDGIFYVVDP 542
AETSLTI+GI YV+DP
Sbjct: 677 AETSLTIEGIIYVLDP 692
>sp|Q7YR39|DHX16_PANTR Putative pre-mRNA-splicing factor ATP-dependent RNA helicase DHX16
OS=Pan troglodytes GN=DHX16 PE=3 SV=1
Length = 1044
Score = 222 bits (565), Expect = 7e-57, Method: Compositional matrix adjust.
Identities = 102/218 (46%), Positives = 151/218 (69%), Gaps = 5/218 (2%)
Query: 5 VVTPISQMAEFPLEPNLSKMLIMSVHLQCSDEVLTIVSMLSVQN-VFYRPKDKQALADQK 63
+ T +MAE P++P LSKM++ S CS+E+LT+ +MLSV N +FYRPKDK AD
Sbjct: 811 LTTSGRKMAELPVDPMLSKMILASEKYSCSEEILTVAAMLSVNNSIFYRPKDKVVHADNA 870
Query: 64 KAKFNQMEGDHITLLAVYNSWRNNKFSNAWCYENFVQIRTLKRAQDVRKQLLGIMDRHKL 123
+ F GDH+ LL VY W + +S+ WCYENFVQ R+++RA+DVR+QL G+++R ++
Sbjct: 871 RVNFFLPGGDHLVLLNVYTQWAESGYSSQWCYENFVQFRSMRRARDVREQLEGLLERVEV 930
Query: 124 DVVSAGKNTVRVQKAVCSGFFRNAAKKDPQEGYRTLVDSQVVYIHPSSALFNRQPEWVIY 183
+ S + +RV+KA+ +G+F + A+ + GYRT+ Q V+IHP+S+LF +QP W++Y
Sbjct: 931 GLSSCQGDYIRVRKAITAGYFYHTARL-TRSGYRTVKQQQTVFIHPNSSLFEQQPRWLLY 989
Query: 184 HELVQTTKEYMREVTSIDPKWLVEFAPAFFK---FSDP 218
HELV TTKE+MR+V I+ WL+E AP ++K DP
Sbjct: 990 HELVLTTKEFMRQVLEIESSWLLEVAPHYYKAKELEDP 1027
Score = 120 bits (301), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 52/111 (46%), Positives = 79/111 (71%)
Query: 231 EPLQRTNRISFPPGLLKQAVKKRPEIKLIVTSATLDAVKFSSYFFEAPIFTIPGRTFPVE 290
E +RT GL+K + RPE+K++V SAT+D +FS++F +AP+F IPGR FPV+
Sbjct: 524 EAHERTLHTDILFGLIKDVARFRPELKVLVASATMDTARFSTFFDDAPVFRIPGRRFPVD 583
Query: 291 VLYTKEPETDYLDASLITVMQIHLREPPGDVLLFLTGKLDVRKQLLGIMDR 341
+ YTK PE DYL+A +++V+QIH+ +PPGD+L+FLTG+ ++ + DR
Sbjct: 584 IFYTKAPEADYLEACVVSVLQIHVTQPPGDILVFLTGQEEIEAACEMLQDR 634
Score = 112 bits (280), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 51/113 (45%), Positives = 80/113 (70%), Gaps = 4/113 (3%)
Query: 330 DVRKQLLGIMDRHKLDVVSAGKNTVRVQKAVCSGFFRNAAKKDPQEGYRTLVDSQVVYIH 389
DVR+QL G+++R ++ + S + +RV+KA+ +G+F + A+ + GYRT+ Q V+IH
Sbjct: 916 DVREQLEGLLERVEVGLSSCQGDYIRVRKAITAGYFYHTARLT-RSGYRTVKQQQTVFIH 974
Query: 390 PSSALFNRQPEWVIYHELVQTTKEYMREVTSIDPKWLVEFAPAFFK---FSDP 439
P+S+LF +QP W++YHELV TTKE+MR+V I+ WL+E AP ++K DP
Sbjct: 975 PNSSLFEQQPRWLLYHELVLTTKEFMRQVLEIESSWLLEVAPHYYKAKELEDP 1027
Score = 109 bits (273), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 47/76 (61%), Positives = 63/76 (82%)
Query: 467 SREEIDTACEILYERMKSLGPDVPELIILPVYSALPSEMQTRIFEAAPPGSRKVVIATNI 526
+EEI+ ACE+L +R + LG + EL++LP+Y+ LPS+MQ RIF+ PPG+RKVV+ATNI
Sbjct: 620 GQEEIEAACEMLQDRCRRLGSKIRELLVLPIYANLPSDMQARIFQPTPPGARKVVVATNI 679
Query: 527 AETSLTIDGIFYVVDP 542
AETSLTI+GI YV+DP
Sbjct: 680 AETSLTIEGIIYVLDP 695
>sp|Q767K6|DHX16_PIG Putative pre-mRNA-splicing factor ATP-dependent RNA helicase DHX16
OS=Sus scrofa GN=DHX16 PE=3 SV=1
Length = 1045
Score = 222 bits (565), Expect = 7e-57, Method: Compositional matrix adjust.
Identities = 102/218 (46%), Positives = 150/218 (68%), Gaps = 5/218 (2%)
Query: 5 VVTPISQMAEFPLEPNLSKMLIMSVHLQCSDEVLTIVSMLSVQN-VFYRPKDKQALADQK 63
+ T +MAE P++P LSKM++ S CS+E+LT+ +MLSV N +FYRPKDK AD
Sbjct: 812 LTTSGRKMAELPVDPMLSKMILASEKYSCSEEILTVAAMLSVNNSIFYRPKDKVVHADNA 871
Query: 64 KAKFNQMEGDHITLLAVYNSWRNNKFSNAWCYENFVQIRTLKRAQDVRKQLLGIMDRHKL 123
+ F GDH+ LL VY W + +S+ WCYENFVQ R+++RA+DVR+QL G+++R ++
Sbjct: 872 RVNFFLPGGDHLVLLNVYTQWAESGYSSQWCYENFVQFRSMRRARDVREQLEGLLERVEV 931
Query: 124 DVVSAGKNTVRVQKAVCSGFFRNAAKKDPQEGYRTLVDSQVVYIHPSSALFNRQPEWVIY 183
+ S + +RV+KA+ +G+F + A+ + GYRT+ Q V+IHP+S+LF QP W++Y
Sbjct: 932 GLSSCQGDYIRVRKAITAGYFYHTARL-TRSGYRTVKQQQTVFIHPNSSLFEEQPRWLLY 990
Query: 184 HELVQTTKEYMREVTSIDPKWLVEFAPAFFK---FSDP 218
HELV TTKE+MR+V I+ WL+E AP ++K DP
Sbjct: 991 HELVLTTKEFMRQVLEIESSWLLEVAPHYYKAKELEDP 1028
Score = 121 bits (303), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 53/111 (47%), Positives = 79/111 (71%)
Query: 231 EPLQRTNRISFPPGLLKQAVKKRPEIKLIVTSATLDAVKFSSYFFEAPIFTIPGRTFPVE 290
E +RT GL+K + RPE+K++V SATLD +FS++F +AP+F IPGR FPV+
Sbjct: 525 EAHERTLHTDILFGLIKDVARFRPELKVLVASATLDTARFSTFFDDAPVFRIPGRRFPVD 584
Query: 291 VLYTKEPETDYLDASLITVMQIHLREPPGDVLLFLTGKLDVRKQLLGIMDR 341
+ YTK PE DYL+A +++V+QIH+ +PPGD+L+FLTG+ ++ + DR
Sbjct: 585 IFYTKAPEADYLEACVVSVLQIHVTQPPGDILVFLTGQEEIEAACEMLQDR 635
Score = 112 bits (279), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 51/113 (45%), Positives = 79/113 (69%), Gaps = 4/113 (3%)
Query: 330 DVRKQLLGIMDRHKLDVVSAGKNTVRVQKAVCSGFFRNAAKKDPQEGYRTLVDSQVVYIH 389
DVR+QL G+++R ++ + S + +RV+KA+ +G+F + A+ + GYRT+ Q V+IH
Sbjct: 917 DVREQLEGLLERVEVGLSSCQGDYIRVRKAITAGYFYHTARL-TRSGYRTVKQQQTVFIH 975
Query: 390 PSSALFNRQPEWVIYHELVQTTKEYMREVTSIDPKWLVEFAPAFFK---FSDP 439
P+S+LF QP W++YHELV TTKE+MR+V I+ WL+E AP ++K DP
Sbjct: 976 PNSSLFEEQPRWLLYHELVLTTKEFMRQVLEIESSWLLEVAPHYYKAKELEDP 1028
Score = 109 bits (273), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 47/76 (61%), Positives = 63/76 (82%)
Query: 467 SREEIDTACEILYERMKSLGPDVPELIILPVYSALPSEMQTRIFEAAPPGSRKVVIATNI 526
+EEI+ ACE+L +R + LG + EL++LP+Y+ LPS+MQ RIF+ PPG+RKVV+ATNI
Sbjct: 621 GQEEIEAACEMLQDRCRRLGSKIRELLVLPIYANLPSDMQARIFQPTPPGARKVVVATNI 680
Query: 527 AETSLTIDGIFYVVDP 542
AETSLTI+GI YV+DP
Sbjct: 681 AETSLTIEGIIYVLDP 696
>sp|Q54MH3|DHX16_DICDI Putative pre-mRNA-splicing factor ATP-dependent RNA helicase DHX16
OS=Dictyostelium discoideum GN=dhx16 PE=3 SV=1
Length = 1106
Score = 209 bits (533), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 106/218 (48%), Positives = 147/218 (67%), Gaps = 1/218 (0%)
Query: 11 QMAEFPLEPNLSKMLIMSVHLQCSDEVLTIVSMLSVQN-VFYRPKDKQALADQKKAKFNQ 69
+MAEFP++P LSKM+I S +CS+E+LTI +MLSV N +FYRPKDK AD + F
Sbjct: 881 KMAEFPVDPQLSKMIIASEKYKCSEEILTICAMLSVGNTIFYRPKDKAFAADAARKLFFH 940
Query: 70 MEGDHITLLAVYNSWRNNKFSNAWCYENFVQIRTLKRAQDVRKQLLGIMDRHKLDVVSAG 129
+GDH+TL+ V+N WR + ++ WC+ENF+Q R++KRAQDVR QL +++R ++ +VS
Sbjct: 941 PQGDHLTLMNVFNQWRESGYAVQWCFENFIQHRSMKRAQDVRDQLELLLERVEIPLVSNV 1000
Query: 130 KNTVRVQKAVCSGFFRNAAKKDPQEGYRTLVDSQVVYIHPSSALFNRQPEWVIYHELVQT 189
+T ++K + SGFF N+AK + +RT +Q V IHPSS LF P+WV+YHELV T
Sbjct: 1001 DDTDSIRKCIASGFFYNSAKLEKSGLFRTTKHNQSVQIHPSSCLFQSPPKWVVYHELVLT 1060
Query: 190 TKEYMREVTSIDPKWLVEFAPAFFKFSDPTKLSKFKKN 227
TKE+MR++ I WL E AP +K D K KN
Sbjct: 1061 TKEFMRQIVEIQSSWLHEIAPHIYKEKDVNDNQKLPKN 1098
Score = 113 bits (282), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 52/101 (51%), Positives = 72/101 (71%)
Query: 231 EPLQRTNRISFPPGLLKQAVKKRPEIKLIVTSATLDAVKFSSYFFEAPIFTIPGRTFPVE 290
E +RT GLLK + RP++KL+++SAT+DA +FS YF AP F IPGR + V
Sbjct: 588 EAHERTLHTDILFGLLKDITRFRPDLKLLISSATMDAERFSDYFDGAPTFNIPGRKYEVT 647
Query: 291 VLYTKEPETDYLDASLITVMQIHLREPPGDVLLFLTGKLDV 331
YT+ PE DYLDA+++TV+QIH+ EP GD+L+FLTG+ +V
Sbjct: 648 THYTQAPEADYLDAAVVTVLQIHITEPLGDILVFLTGQEEV 688
Score = 104 bits (260), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 53/119 (44%), Positives = 73/119 (61%)
Query: 330 DVRKQLLGIMDRHKLDVVSAGKNTVRVQKAVCSGFFRNAAKKDPQEGYRTLVDSQVVYIH 389
DVR QL +++R ++ +VS +T ++K + SGFF N+AK + +RT +Q V IH
Sbjct: 980 DVRDQLELLLERVEIPLVSNVDDTDSIRKCIASGFFYNSAKLEKSGLFRTTKHNQSVQIH 1039
Query: 390 PSSALFNRQPEWVIYHELVQTTKEYMREVTSIDPKWLVEFAPAFFKFSDPTKLSKFKKN 448
PSS LF P+WV+YHELV TTKE+MR++ I WL E AP +K D K KN
Sbjct: 1040 PSSCLFQSPPKWVVYHELVLTTKEFMRQIVEIQSSWLHEIAPHIYKEKDVNDNQKLPKN 1098
Score = 101 bits (251), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 45/76 (59%), Positives = 58/76 (76%)
Query: 467 SREEIDTACEILYERMKSLGPDVPELIILPVYSALPSEMQTRIFEAAPPGSRKVVIATNI 526
+EE+D A E+L R + LG + ELII +YS LP+++Q +IFE PP +RKVV+ATNI
Sbjct: 684 GQEEVDQAAEMLQTRTRGLGTKIKELIITRIYSTLPTDLQAKIFEPTPPNARKVVLATNI 743
Query: 527 AETSLTIDGIFYVVDP 542
AETSLTIDGI YV+DP
Sbjct: 744 AETSLTIDGIIYVIDP 759
>sp|Q10752|CDC28_SCHPO Pre-mRNA-splicing factor ATP-dependent RNA helicase-like protein
cdc28 OS=Schizosaccharomyces pombe (strain 972 / ATCC
24843) GN=cdc28 PE=3 SV=2
Length = 1055
Score = 205 bits (522), Expect = 7e-52, Method: Compositional matrix adjust.
Identities = 102/222 (45%), Positives = 151/222 (68%), Gaps = 6/222 (2%)
Query: 11 QMAEFPLEPNLSKMLIMSVHLQCSDEVLTIVSMLS-VQNVFYRPKDKQALADQKKAKFNQ 69
QMAEFP +P LSK LI S C +EVL+IVSML ++FYRPKDK AD+ +A F Q
Sbjct: 833 QMAEFPTDPMLSKSLIASSKYGCVEEVLSIVSMLGEASSLFYRPKDKIMEADKARANFTQ 892
Query: 70 MEGDHITLLAVYNSWRNNKFSNAWCYENFVQIRTLKRAQDVRKQLLGIMDRHKLDVVSAG 129
GDH+TLL ++N W + FS W ENF+Q ++L RA+DVR QL + +R ++++V+
Sbjct: 893 PGGDHLTLLHIWNEWVDTDFSYNWARENFLQYKSLCRARDVRDQLANLCERVEIELVTNS 952
Query: 130 KNTVR-VQKAVCSGFFRNAAKKD-PQEGYRTLVDSQVVYIHPSSALFNRQPEWVIYHELV 187
++ ++KA+ +G+F NAA+ D + YRT+ +Q VYIHPSS++ ++P+ +IY ELV
Sbjct: 953 SESLDPIKKAITAGYFSNAARLDRSGDSYRTVKSNQTVYIHPSSSVAEKKPKVIIYFELV 1012
Query: 188 QTTKEYMREVTSIDPKWLVEFAPAFFKFSDPTKLSKFKKNQR 229
TTKEY R++T I P+WL+E +P +FK P + + +K Q+
Sbjct: 1013 LTTKEYCRQITEIQPEWLLEISPHYFK---PENIEELQKTQK 1051
Score = 110 bits (274), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 46/101 (45%), Positives = 75/101 (74%)
Query: 231 EPLQRTNRISFPPGLLKQAVKKRPEIKLIVTSATLDAVKFSSYFFEAPIFTIPGRTFPVE 290
E +RT GL+K + RP++K++++SAT+DA KFS+YF EAP+F +PGR +PV+
Sbjct: 540 EAHERTLHTDILFGLVKDIARFRPDLKVLISSATIDAEKFSAYFDEAPVFYVPGRRYPVD 599
Query: 291 VLYTKEPETDYLDASLITVMQIHLREPPGDVLLFLTGKLDV 331
+ YT +PE +Y+ A++ T++QIH +P GD+L+FLTG+ ++
Sbjct: 600 IYYTPQPEANYIQAAITTILQIHTTQPAGDILVFLTGQDEI 640
Score = 103 bits (258), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 50/123 (40%), Positives = 84/123 (68%), Gaps = 5/123 (4%)
Query: 330 DVRKQLLGIMDRHKLDVVSAGKNTVR-VQKAVCSGFFRNAAKKD-PQEGYRTLVDSQVVY 387
DVR QL + +R ++++V+ ++ ++KA+ +G+F NAA+ D + YRT+ +Q VY
Sbjct: 932 DVRDQLANLCERVEIELVTNSSESLDPIKKAITAGYFSNAARLDRSGDSYRTVKSNQTVY 991
Query: 388 IHPSSALFNRQPEWVIYHELVQTTKEYMREVTSIDPKWLVEFAPAFFKFSDPTKLSKFKK 447
IHPSS++ ++P+ +IY ELV TTKEY R++T I P+WL+E +P +FK P + + +K
Sbjct: 992 IHPSSSVAEKKPKVIIYFELVLTTKEYCRQITEIQPEWLLEISPHYFK---PENIEELQK 1048
Query: 448 NQR 450
Q+
Sbjct: 1049 TQK 1051
Score = 90.9 bits (224), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 39/75 (52%), Positives = 58/75 (77%)
Query: 467 SREEIDTACEILYERMKSLGPDVPELIILPVYSALPSEMQTRIFEAAPPGSRKVVIATNI 526
++EI+ E + E + LG +PE+I+ P+Y+ LPSE+Q +IF+ PPG+RKVV+ATNI
Sbjct: 636 GQDEIELMSENMQELCRILGKRIPEIILCPIYANLPSELQAKIFDPTPPGARKVVLATNI 695
Query: 527 AETSLTIDGIFYVVD 541
AETS+TIDG+ +V+D
Sbjct: 696 AETSITIDGVNFVID 710
>sp|O45244|DHX16_CAEEL Probable pre-mRNA-splicing factor ATP-dependent RNA helicase mog-4
OS=Caenorhabditis elegans GN=mog-4 PE=1 SV=2
Length = 1008
Score = 205 bits (521), Expect = 9e-52, Method: Compositional matrix adjust.
Identities = 94/205 (45%), Positives = 141/205 (68%), Gaps = 2/205 (0%)
Query: 11 QMAEFPLEPNLSKMLIMSVHLQCSDEVLTIVSMLSVQN-VFYRPKDKQALADQKKAKFNQ 69
+MAEFP +P +SKM+I S +CS+E++TI +MLS VFYRPK + AD + F
Sbjct: 780 RMAEFPCDPCMSKMIIASEKYECSEEIVTIAAMLSCNAAVFYRPKAQVIHADSARKGFWS 839
Query: 70 MEGDHITLLAVYNSWRNNKFSNAWCYENFVQIRTLKRAQDVRKQLLGIMDRHKLDVVSAG 129
GDHITL+ VYN W+ + FS WC EN+VQ RT+KRA+DVR QL+G+++R +++ S+
Sbjct: 840 PAGDHITLMNVYNKWQESSFSQRWCVENYVQHRTMKRARDVRDQLVGLLERVEIETKSS- 898
Query: 130 KNTVRVQKAVCSGFFRNAAKKDPQEGYRTLVDSQVVYIHPSSALFNRQPEWVIYHELVQT 189
+T++++KA+ +G+F N +K D Y+T+ + HP+S LF P WV+Y ELV T
Sbjct: 899 TDTIKIRKAITAGYFYNVSKLDNTGHYKTVKHKHTTHPHPNSCLFEETPRWVVYFELVFT 958
Query: 190 TKEYMREVTSIDPKWLVEFAPAFFK 214
+KE+MRE++ I+ WL+E AP ++K
Sbjct: 959 SKEFMREMSEIESGWLLEVAPHYYK 983
Score = 122 bits (305), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 57/114 (50%), Positives = 83/114 (72%), Gaps = 1/114 (0%)
Query: 231 EPLQRTNRISFPPGLLKQAVKKRPEIKLIVTSATLDAVKFSSYFFEAPIFTIPGRTFPVE 290
E +RT GL+K + R ++KL+++SATLDA KFSS+F +APIF IPGR FPV+
Sbjct: 486 EAHERTLHTDILFGLVKDIARFRKDLKLLISSATLDAEKFSSFFDDAPIFRIPGRRFPVD 545
Query: 291 VLYTKEPETDYLDASLITVMQIHLREP-PGDVLLFLTGKLDVRKQLLGIMDRHK 343
+ YT+ PE DY+DA+++T+MQIHL +P PGD+L+FLTG+ ++ +M+R K
Sbjct: 546 IYYTQAPEADYVDAAIVTIMQIHLTQPLPGDILVFLTGQEEIETVQEALMERSK 599
Score = 99.8 bits (247), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 43/106 (40%), Positives = 73/106 (68%), Gaps = 1/106 (0%)
Query: 330 DVRKQLLGIMDRHKLDVVSAGKNTVRVQKAVCSGFFRNAAKKDPQEGYRTLVDSQVVYIH 389
DVR QL+G+++R +++ S+ +T++++KA+ +G+F N +K D Y+T+ + H
Sbjct: 879 DVRDQLVGLLERVEIETKSS-TDTIKIRKAITAGYFYNVSKLDNTGHYKTVKHKHTTHPH 937
Query: 390 PSSALFNRQPEWVIYHELVQTTKEYMREVTSIDPKWLVEFAPAFFK 435
P+S LF P WV+Y ELV T+KE+MRE++ I+ WL+E AP ++K
Sbjct: 938 PNSCLFEETPRWVVYFELVFTSKEFMREMSEIESGWLLEVAPHYYK 983
Score = 98.2 bits (243), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 47/76 (61%), Positives = 59/76 (77%)
Query: 467 SREEIDTACEILYERMKSLGPDVPELIILPVYSALPSEMQTRIFEAAPPGSRKVVIATNI 526
+EEI+T E L ER K+LG + ELI LPVY+ LPS++Q +IFE P +RKVV+ATNI
Sbjct: 583 GQEEIETVQEALMERSKALGSKIKELIPLPVYANLPSDLQAKIFEPTPKDARKVVLATNI 642
Query: 527 AETSLTIDGIFYVVDP 542
AETS+TIDGI YV+DP
Sbjct: 643 AETSVTIDGINYVIDP 658
>sp|P34498|MOG1_CAEEL Probable pre-mRNA-splicing factor ATP-dependent RNA helicase mog-1
OS=Caenorhabditis elegans GN=mog-1 PE=1 SV=2
Length = 1131
Score = 204 bits (520), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 101/221 (45%), Positives = 141/221 (63%), Gaps = 3/221 (1%)
Query: 6 VTPIS-QMAEFPLEPNLSKMLIMSVHLQCSDEVLTIVSMLSVQNVFYRPKDKQALADQKK 64
+TP+ +M EFPL+P LSKMLIMS + CSDEVLTIVSMLSV +F+RPK ++ AD KK
Sbjct: 849 LTPMGRKMVEFPLDPTLSKMLIMSAEMGCSDEVLTIVSMLSVPAIFFRPKGREEEADAKK 908
Query: 65 AKFNQMEGDHITLLAVYNSWRNNKFSNAWCYENFVQIRTLKRAQDVRKQLLGIMDRHKLD 124
KF E DH+T L VY WR +K+S WC +N++ ++ LK+ ++VR QL IM KL
Sbjct: 909 EKFQVPESDHLTFLNVYIQWRTHKYSAKWCADNYLHVKALKKVREVRAQLKEIMQDLKLP 968
Query: 125 VVSAGKNTVRVQKAVCSGFFRNAAKKDPQEGYRTLVDSQVVYIHPSSALFNR--QPEWVI 182
++S G V+K +CS +F NAA+ Y + ++HP+SALF P++V+
Sbjct: 969 LISNGSEWDIVRKCICSAYFHNAARLKGIGEYVNVRTGIPCFLHPTSALFGMGFMPDYVV 1028
Query: 183 YHELVQTTKEYMREVTSIDPKWLVEFAPAFFKFSDPTKLSK 223
YHEL+ T KEYM+ VT++D WL E P F+ + + K
Sbjct: 1029 YHELIMTAKEYMQCVTAVDAIWLAELGPMFYSIKESKQSRK 1069
Score = 98.6 bits (244), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 48/104 (46%), Positives = 70/104 (67%), Gaps = 7/104 (6%)
Query: 244 GLLKQAVKKRPEIKLIVTSATLDAVKFSSYFF-EAPIFTIPGRTFPVEVLYTKEPETDYL 302
GLL++ + KR ++KLIVTSAT+DA KF+ +F P FTIPGRTFPVE+ + + P DY+
Sbjct: 575 GLLREVIAKRADLKLIVTSATMDADKFADFFGGNCPTFTIPGRTFPVELFHARTPVEDYV 634
Query: 303 DASLITVMQIHLREPPGDVLLFLTGKLDVR------KQLLGIMD 340
DA++ + IHL GD+L+F+ G+ D+ K+ LG +D
Sbjct: 635 DAAVKQAVTIHLGGMDGDILIFMPGQEDIECTCEMIKEKLGELD 678
Score = 92.0 bits (227), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 39/76 (51%), Positives = 58/76 (76%), Gaps = 1/76 (1%)
Query: 467 SREEIDTACEILYERMKSLGPDVPELIILPVYSALPSEMQTRIFEAAPPGSRKVVIATNI 526
+E+I+ CE++ E++ L + P L +LP+YS LPS++Q +IF+ AP G RK ++ATNI
Sbjct: 659 GQEDIECTCEMIKEKLGEL-DEAPPLAVLPIYSQLPSDLQAKIFQRAPGGMRKAIVATNI 717
Query: 527 AETSLTIDGIFYVVDP 542
AETSLT+DGI +V+DP
Sbjct: 718 AETSLTVDGILFVIDP 733
Score = 85.9 bits (211), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 45/117 (38%), Positives = 66/117 (56%), Gaps = 2/117 (1%)
Query: 330 DVRKQLLGIMDRHKLDVVSAGKNTVRVQKAVCSGFFRNAAKKDPQEGYRTLVDSQVVYIH 389
+VR QL IM KL ++S G V+K +CS +F NAA+ Y + ++H
Sbjct: 953 EVRAQLKEIMQDLKLPLISNGSEWDIVRKCICSAYFHNAARLKGIGEYVNVRTGIPCFLH 1012
Query: 390 PSSALFNR--QPEWVIYHELVQTTKEYMREVTSIDPKWLVEFAPAFFKFSDPTKLSK 444
P+SALF P++V+YHEL+ T KEYM+ VT++D WL E P F+ + + K
Sbjct: 1013 PTSALFGMGFMPDYVVYHELIMTAKEYMQCVTAVDAIWLAELGPMFYSIKESKQSRK 1069
>sp|P15938|PRP16_YEAST Pre-mRNA-splicing factor ATP-dependent RNA helicase PRP16
OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c)
GN=PRP16 PE=1 SV=2
Length = 1071
Score = 204 bits (519), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 102/211 (48%), Positives = 144/211 (68%), Gaps = 3/211 (1%)
Query: 6 VTPIS-QMAEFPLEPNLSKMLIMSVHLQCSDEVLTIVSMLSVQNVFYRPKDKQALADQKK 64
+TP+ QMA+FPL+P+LSK+L+++V CSDE+LTIVSMLSV VFYRPK++Q AD +
Sbjct: 773 LTPLGLQMAKFPLQPSLSKILLIAVRNGCSDEMLTIVSMLSVPQVFYRPKERQKEADIAR 832
Query: 65 AKFNQMEGDHITLLAVYNSWRNNKFSNAWCYENFVQIRTLKRAQDVRKQLLGIMDRHKLD 124
KF + DH+TLL V+ WR N FS+ WC ++FVQ ++L RA+D+R QLL I+ K+
Sbjct: 833 NKFFIAKSDHLTLLNVFEQWRANNFSSHWCNKHFVQYKSLVRARDIRDQLLTILKSQKIP 892
Query: 125 VVSAGKNTVRVQKAVCSGFFRNAAKKDPQEGYRTLVDSQVVYIHPSSAL--FNRQPEWVI 182
V+S+GK+ ++K +CSGF AAK Y L V +HP+SAL P +V+
Sbjct: 893 VISSGKDWDIIKKCICSGFAHQAAKITGLRNYVHLKTGVSVQLHPTSALHGLGDLPPYVV 952
Query: 183 YHELVQTTKEYMREVTSIDPKWLVEFAPAFF 213
YHEL+ T+KEY+ VTS+DP WL+E+ +
Sbjct: 953 YHELLMTSKEYICCVTSVDPFWLMEYGGLLY 983
Score = 94.7 bits (234), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 43/90 (47%), Positives = 65/90 (72%), Gaps = 2/90 (2%)
Query: 244 GLLKQAVKKRPEIKLIVTSATLDAVKFSSYFFEAPIFTIPGRTFPVEVLYTKEPETDYLD 303
G K + +R ++KLI+TSAT++A KFS++F AP FTIPGRTFPV+ +YT P DY++
Sbjct: 487 GFFKILLARRRDLKLIITSATMNAKKFSAFFGNAPQFTIPGRTFPVQTIYTSNPVQDYVE 546
Query: 304 ASLITVMQIHLRE--PPGDVLLFLTGKLDV 331
A++ ++IHL GD+L+F+TG+ D+
Sbjct: 547 AAVSQAVKIHLANDCSSGDILIFMTGQEDI 576
Score = 89.4 bits (220), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 45/107 (42%), Positives = 65/107 (60%), Gaps = 2/107 (1%)
Query: 330 DVRKQLLGIMDRHKLDVVSAGKNTVRVQKAVCSGFFRNAAKKDPQEGYRTLVDSQVVYIH 389
D+R QLL I+ K+ V+S+GK+ ++K +CSGF AAK Y L V +H
Sbjct: 877 DIRDQLLTILKSQKIPVISSGKDWDIIKKCICSGFAHQAAKITGLRNYVHLKTGVSVQLH 936
Query: 390 PSSAL--FNRQPEWVIYHELVQTTKEYMREVTSIDPKWLVEFAPAFF 434
P+SAL P +V+YHEL+ T+KEY+ VTS+DP WL+E+ +
Sbjct: 937 PTSALHGLGDLPPYVVYHELLMTSKEYICCVTSVDPFWLMEYGGLLY 983
Score = 68.6 bits (166), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 37/84 (44%), Positives = 55/84 (65%), Gaps = 9/84 (10%)
Query: 467 SREEIDTACEILYERM-----KSLGP----DVPELIILPVYSALPSEMQTRIFEAAPPGS 517
+E+I+T + L E+ K G ++ ++ ILP+YSALP+++Q +IF+
Sbjct: 572 GQEDIETTFDTLQEKFLQVYSKKFGTANFEEINDIEILPIYSALPADLQFKIFQDLHGTK 631
Query: 518 RKVVIATNIAETSLTIDGIFYVVD 541
RK++IATNIAETSLTI GI YV+D
Sbjct: 632 RKIIIATNIAETSLTIKGIRYVID 655
>sp|O22899|DHX15_ARATH Probable pre-mRNA-splicing factor ATP-dependent RNA helicase
OS=Arabidopsis thaliana GN=At2g47250 PE=2 SV=1
Length = 729
Score = 197 bits (500), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 93/210 (44%), Positives = 142/210 (67%), Gaps = 5/210 (2%)
Query: 12 MAEFPLEPNLSKMLIMSVHLQCSDEVLTIVSMLSVQNVFYRPKDKQALADQKKAKFNQME 71
M+EFPL+P +SKMLI+S CS+E+L++ +MLSV N F RP++ Q AD+ KA+F ++
Sbjct: 493 MSEFPLDPQMSKMLIVSPEFNCSNEILSVSAMLSVPNCFVRPREAQKAADEAKARFGHID 552
Query: 72 GDHITLLAVYNSWRNNKFSNAWCYENFVQIRTLKRAQDVRKQLLGIMDRHKLDVVSAGKN 131
GDH+TLL VY++++ N WC+ENFV R +K A +VR+QL+ IM R L + S N
Sbjct: 553 GDHLTLLNVYHAYKQNNEDPNWCFENFVNNRAMKSADNVRQQLVRIMSRFNLKMCSTDFN 612
Query: 132 T----VRVQKAVCSGFFRNAAKKDPQEGYRTLVDSQVVYIHPSSALFNRQPEWVIYHELV 187
+ V ++KA+ +G+F A + Y T+ D+QVV++HPS+ L + +PEWVIY+E V
Sbjct: 613 SRDYYVNIRKAMLAGYFMQVAHLERTGHYLTVKDNQVVHLHPSNCL-DHKPEWVIYNEYV 671
Query: 188 QTTKEYMREVTSIDPKWLVEFAPAFFKFSD 217
TT+ ++R VT I +WLV+ A ++ S+
Sbjct: 672 LTTRNFIRTVTDIRGEWLVDVAQHYYDLSN 701
Score = 117 bits (292), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 50/88 (56%), Positives = 71/88 (80%)
Query: 244 GLLKQAVKKRPEIKLIVTSATLDAVKFSSYFFEAPIFTIPGRTFPVEVLYTKEPETDYLD 303
GLLK+ ++ RP++KL+V SATL+A KF YF AP+ +PGR PVE+ YT+EPE DYL+
Sbjct: 205 GLLKEVLRNRPDLKLVVMSATLEAEKFQEYFSGAPLMKVPGRLHPVEIFYTQEPERDYLE 264
Query: 304 ASLITVMQIHLREPPGDVLLFLTGKLDV 331
A++ TV+QIH+ EPPGD+L+FLTG+ ++
Sbjct: 265 AAIRTVVQIHMCEPPGDILVFLTGEEEI 292
Score = 89.7 bits (221), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 51/134 (38%), Positives = 80/134 (59%), Gaps = 8/134 (5%)
Query: 330 DVRKQLLGIMDRHKLDVVSAGKNT----VRVQKAVCSGFFRNAAKKDPQEGYRTLVDSQV 385
+VR+QL+ IM R L + S N+ V ++KA+ +G+F A + Y T+ D+QV
Sbjct: 590 NVRQQLVRIMSRFNLKMCSTDFNSRDYYVNIRKAMLAGYFMQVAHLERTGHYLTVKDNQV 649
Query: 386 VYIHPSSALFNRQPEWVIYHELVQTTKEYMREVTSIDPKWLVEFAPAFFKFSDPTKLSKF 445
V++HPS+ L + +PEWVIY+E V TT+ ++R VT I +WLV+ A ++ S+
Sbjct: 650 VHLHPSNCL-DHKPEWVIYNEYVLTTRNFIRTVTDIRGEWLVDVAQHYYDLSN---FPNC 705
Query: 446 KKNQRLEPLYNKYE 459
+ + LE LY K E
Sbjct: 706 EAKRALEKLYKKRE 719
Score = 82.8 bits (203), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 40/83 (48%), Positives = 55/83 (66%), Gaps = 7/83 (8%)
Query: 467 SREEIDTACEILYERMKSLGPDVPELIILPVYSALPSEMQTRIFEAAP-------PGSRK 519
EEI+ AC + + + +LG V + ++P+YS LP MQ +IF+ AP P RK
Sbjct: 288 GEEEIEDACRKINKEVSNLGDQVGPVKVVPLYSTLPPAMQQKIFDPAPVPLTEGGPAGRK 347
Query: 520 VVIATNIAETSLTIDGIFYVVDP 542
+V++TNIAETSLTIDGI YV+DP
Sbjct: 348 IVVSTNIAETSLTIDGIVYVIDP 370
>sp|Q20875|DHX15_CAEEL Putative pre-mRNA-splicing factor ATP-dependent RNA helicase
F56D2.6 OS=Caenorhabditis elegans GN=F56D2.6 PE=2 SV=1
Length = 739
Score = 196 bits (497), Expect = 5e-49, Method: Compositional matrix adjust.
Identities = 97/232 (41%), Positives = 149/232 (64%), Gaps = 6/232 (2%)
Query: 10 SQMAEFPLEPNLSKMLIMSVHLQCSDEVLTIVSMLSVQNVFYRPKDKQALADQKKAKFNQ 69
S MAEFPL+P L+KMLI S L CS+E+L+I +MLSV + RP + + AD+ KA+F
Sbjct: 504 SLMAEFPLDPQLAKMLITSTELNCSNEILSITAMLSVPQCWVRPNEMRTEADEAKARFAH 563
Query: 70 MEGDHITLLAVYNSWRNNKFSNAWCYENFVQIRTLKRAQDVRKQLLGIMDRHKLDVVSAG 129
++GDH+TLL VY+S++ N+ WCY+NF+ RT+K A VR QL +MD++ L VS
Sbjct: 564 IDGDHLTLLNVYHSFKQNQEDPQWCYDNFINYRTMKTADTVRTQLSRVMDKYNLRRVSTD 623
Query: 130 KNT----VRVQKAVCSGFFRNAAKKDPQEGYRTLVDSQVVYIHPSSALFNRQPEWVIYHE 185
+ + ++KA+ +GFF A + Y T+ D+Q+V +HPS+ L + +PEW +Y+E
Sbjct: 624 FKSRDYYLNIRKALVAGFFMQVAHLERSGHYVTVKDNQLVNLHPSTVL-DHKPEWALYNE 682
Query: 186 LVQTTKEYMREVTSIDPKWLVEFAPAFFKFSD-PTKLSKFKKNQRLEPLQRT 236
V TTK ++R VT + P+WL++ AP ++ + P +K K ++ LQR
Sbjct: 683 FVLTTKNFIRTVTDVRPEWLLQIAPQYYDLDNFPDGDTKRKLTTVMQTLQRN 734
Score = 104 bits (260), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 52/114 (45%), Positives = 77/114 (67%), Gaps = 1/114 (0%)
Query: 221 LSKFKKNQRLEPLQRTNRISFPPGLLKQAVKKRPEIKLIVTSATLDAVKFSSYFFEAPIF 280
L K+K E +RT GL+K+ V+ R +IK+++ SATLDA KF YF + P+
Sbjct: 195 LDKYKVLILDEAHERTLATDILMGLIKEIVRNRADIKVVIMSATLDAGKFQRYFEDCPLL 254
Query: 281 TIPGRTFPVEVLYTKEPETDYLDASLITVMQIHL-REPPGDVLLFLTGKLDVRK 333
++PGRTFPVE+ +T E DYL+A++ TV+QIH+ E GD+LLFLTG+ ++ +
Sbjct: 255 SVPGRTFPVEIFFTPNAEKDYLEAAIRTVIQIHMVEEVEGDILLFLTGQEEIEE 308
Score = 85.1 bits (209), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 42/82 (51%), Positives = 55/82 (67%), Gaps = 6/82 (7%)
Query: 467 SREEIDTACEILYERMKSLGPDVPELIILPVYSALPSEMQTRIFEAAPPG------SRKV 520
+EEI+ AC+ + +++LG D L +P+YS LP Q RIFE APP SRK
Sbjct: 302 GQEEIEEACKRIDREIQALGADAGALSCIPLYSTLPPAAQQRIFEPAPPNRPNGAISRKC 361
Query: 521 VIATNIAETSLTIDGIFYVVDP 542
VI+TNIAETSLTIDG+ +V+DP
Sbjct: 362 VISTNIAETSLTIDGVVFVIDP 383
Score = 84.0 bits (206), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 41/112 (36%), Positives = 69/112 (61%), Gaps = 5/112 (4%)
Query: 331 VRKQLLGIMDRHKLDVVSAGKNT----VRVQKAVCSGFFRNAAKKDPQEGYRTLVDSQVV 386
VR QL +MD++ L VS + + ++KA+ +GFF A + Y T+ D+Q+V
Sbjct: 604 VRTQLSRVMDKYNLRRVSTDFKSRDYYLNIRKALVAGFFMQVAHLERSGHYVTVKDNQLV 663
Query: 387 YIHPSSALFNRQPEWVIYHELVQTTKEYMREVTSIDPKWLVEFAPAFFKFSD 438
+HPS+ L + +PEW +Y+E V TTK ++R VT + P+WL++ AP ++ +
Sbjct: 664 NLHPSTVL-DHKPEWALYNEFVLTTKNFIRTVTDVRPEWLLQIAPQYYDLDN 714
>sp|Q54NJ4|DHX15_DICDI Putative pre-mRNA-splicing factor ATP-dependent RNA helicase dhx15
OS=Dictyostelium discoideum GN=dhx15 PE=3 SV=1
Length = 727
Score = 195 bits (496), Expect = 8e-49, Method: Compositional matrix adjust.
Identities = 101/234 (43%), Positives = 143/234 (61%), Gaps = 12/234 (5%)
Query: 10 SQMAEFPLEPNLSKMLIMSVHLQCSDEVLTIVSMLSVQNVFYRPKDKQALADQKKAKFNQ 69
S M+EFPL+P LSKMLI+S CS+E+LTI +MLS N F RPKD + AD K F+
Sbjct: 487 SIMSEFPLDPQLSKMLIVSAERSCSNEILTIAAMLSAPNCFMRPKDNRIEADSAKKSFDH 546
Query: 70 MEGDHITLLAVYNSWRNNKFSNAWCYENFVQIRTLKRAQDVRKQLLGIMDRHKLDVVSAG 129
+GDH+T+L VY+S++ N WCY+NF+ R +K+A VR QL I+ R KL +VS
Sbjct: 547 FDGDHLTMLNVYHSFKKNGEDPTWCYDNFLNHRAIKQADSVRSQLARILTRFKLPLVSGD 606
Query: 130 KNTV----RVQKAVCSGFFRNAAKKDPQEGYRTLVDSQVVYIHPSSALFNRQPEWVIYHE 185
N+ ++K + +GFF AK + + Y TL D Q V HPS+ L R+PE+ IY+E
Sbjct: 607 VNSKFYYENIKKCIAAGFFMQVAKCEKKNIYFTLGDEQSVIFHPSTGL-TRRPEFCIYNE 665
Query: 186 LVQTTKEYMREVTSIDPKWLVEFAPAFFKFSDPTKLSKFKKNQRLEPLQRTNRI 239
V T++ Y+R +T + WL+E AP++FK K +K E +QR R+
Sbjct: 666 FVLTSENYIRTITDVKFDWLLELAPSYFKQKSFPKKTK-------ETIQRAQRL 712
Score = 100 bits (250), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 53/117 (45%), Positives = 76/117 (64%), Gaps = 1/117 (0%)
Query: 215 FSDPTKLSKFKKNQRLEPLQRTNRISFPPGLLKQAVKKRPEIKLIVTSATLDAVKFSSYF 274
SDPT L+K+ E +RT GL+K +K+R ++KLIV SATL+A KF YF
Sbjct: 184 MSDPT-LNKYDVIILDEAHERTLSTDILFGLIKDILKRRKDLKLIVMSATLEAGKFQKYF 242
Query: 275 FEAPIFTIPGRTFPVEVLYTKEPETDYLDASLITVMQIHLREPPGDVLLFLTGKLDV 331
AP+ +PGR PVE+ YT+E DYL++++ TV+ IH E GD+L+FLTG+ ++
Sbjct: 243 ENAPLIKVPGRLHPVEIFYTEEAAKDYLESAVRTVIDIHTNEGTGDILVFLTGEEEI 299
Score = 85.9 bits (211), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 51/129 (39%), Positives = 75/129 (58%), Gaps = 6/129 (4%)
Query: 331 VRKQLLGIMDRHKLDVVSAGKNTV----RVQKAVCSGFFRNAAKKDPQEGYRTLVDSQVV 386
VR QL I+ R KL +VS N+ ++K + +GFF AK + + Y TL D Q V
Sbjct: 587 VRSQLARILTRFKLPLVSGDVNSKFYYENIKKCIAAGFFMQVAKCEKKNIYFTLGDEQSV 646
Query: 387 YIHPSSALFNRQPEWVIYHELVQTTKEYMREVTSIDPKWLVEFAPAFFKFSDPTKLSKFK 446
HPS+ L R+PE+ IY+E V T++ Y+R +T + WL+E AP++FK K +K +
Sbjct: 647 IFHPSTGL-TRRPEFCIYNEFVLTSENYIRTITDVKFDWLLELAPSYFKQKSFPKKTK-E 704
Query: 447 KNQRLEPLY 455
QR + LY
Sbjct: 705 TIQRAQRLY 713
Score = 66.6 bits (161), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 34/76 (44%), Positives = 48/76 (63%), Gaps = 4/76 (5%)
Query: 467 SREEIDTACEILYERMKSLGPDVPELIILPVYSALPSEMQTRIFEAAPPGSRKVVIATNI 526
EEI+ C + + G +P + LP+YS+LP Q++IF+ RK +++TNI
Sbjct: 295 GEEEIEDTCAKIQRETRERG--LPPMKTLPLYSSLPIYQQSKIFDTCK--ERKCIVSTNI 350
Query: 527 AETSLTIDGIFYVVDP 542
AETSLTIDGI +VVDP
Sbjct: 351 AETSLTIDGIVFVVDP 366
>sp|Q5RAZ4|DHX15_PONAB Putative pre-mRNA-splicing factor ATP-dependent RNA helicase DHX15
OS=Pongo abelii GN=DHX15 PE=2 SV=2
Length = 795
Score = 193 bits (491), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 94/212 (44%), Positives = 138/212 (65%), Gaps = 5/212 (2%)
Query: 10 SQMAEFPLEPNLSKMLIMSVHLQCSDEVLTIVSMLSVQNVFYRPKDKQALADQKKAKFNQ 69
S MAEFPL+P L+KM+I S CS+EVL+I +MLSV F RP + + AD+ K +F
Sbjct: 560 SMMAEFPLDPQLAKMVIASCDYNCSNEVLSITAMLSVPQCFVRPTEAKKAADEAKMRFAH 619
Query: 70 MEGDHITLLAVYNSWRNNKFSNAWCYENFVQIRTLKRAQDVRKQLLGIMDRHKLDVVSAG 129
++GDH+TLL VY++++ N S WCY+NF+ R+L A +VR+QL IMDR L S
Sbjct: 620 IDGDHLTLLNVYHAFKQNHESVQWCYDNFINYRSLMSADNVRQQLSRIMDRFNLPRRSTD 679
Query: 130 KNT----VRVQKAVCSGFFRNAAKKDPQEGYRTLVDSQVVYIHPSSALFNRQPEWVIYHE 185
+ + ++KA+ +G+F A + Y T+ D+QVV +HPS+ L + +PEWV+Y+E
Sbjct: 680 FTSRDYYINIRKALVTGYFMQVAHLERTGHYLTVKDNQVVQLHPSTVL-DHKPEWVLYNE 738
Query: 186 LVQTTKEYMREVTSIDPKWLVEFAPAFFKFSD 217
V TTK Y+R T I P+WLV+ AP ++ S+
Sbjct: 739 FVLTTKNYIRTCTDIKPEWLVKIAPQYYDMSN 770
Score = 108 bits (270), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 54/102 (52%), Positives = 73/102 (71%), Gaps = 1/102 (0%)
Query: 231 EPLQRTNRISFPPGLLKQAVKKRPEIKLIVTSATLDAVKFSSYFFEAPIFTIPGRTFPVE 290
E +RT G+LK+ V++R ++K+IV SATLDA KF YF P+ TIPGRT PVE
Sbjct: 261 EAHERTLATDILMGVLKEVVRQRSDLKVIVMSATLDAGKFQIYFDNCPLLTIPGRTHPVE 320
Query: 291 VLYTKEPETDYLDASLITVMQIHL-REPPGDVLLFLTGKLDV 331
+ YT EPE DYL+A++ TV+QIH+ E GD+LLFLTG+ ++
Sbjct: 321 IFYTPEPERDYLEAAIRTVIQIHMCEEEEGDLLLFLTGQEEI 362
Score = 88.6 bits (218), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 46/113 (40%), Positives = 70/113 (61%), Gaps = 5/113 (4%)
Query: 330 DVRKQLLGIMDRHKLDVVSAGKNT----VRVQKAVCSGFFRNAAKKDPQEGYRTLVDSQV 385
+VR+QL IMDR L S + + ++KA+ +G+F A + Y T+ D+QV
Sbjct: 659 NVRQQLSRIMDRFNLPRRSTDFTSRDYYINIRKALVTGYFMQVAHLERTGHYLTVKDNQV 718
Query: 386 VYIHPSSALFNRQPEWVIYHELVQTTKEYMREVTSIDPKWLVEFAPAFFKFSD 438
V +HPS+ L + +PEWV+Y+E V TTK Y+R T I P+WLV+ AP ++ S+
Sbjct: 719 VQLHPSTVL-DHKPEWVLYNEFVLTTKNYIRTCTDIKPEWLVKIAPQYYDMSN 770
Score = 87.8 bits (216), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 42/82 (51%), Positives = 57/82 (69%), Gaps = 6/82 (7%)
Query: 467 SREEIDTACEILYERMKSLGPDVPELIILPVYSALPSEMQTRIFEAAPPG------SRKV 520
+EEID AC+ + + LGP+V ++ I+P+YS LP + Q RIFE PP RKV
Sbjct: 358 GQEEIDEACKRIKREVDDLGPEVGDIKIIPLYSTLPPQQQQRIFEPPPPKKQNGAIGRKV 417
Query: 521 VIATNIAETSLTIDGIFYVVDP 542
V++TNIAETSLTIDG+ +V+DP
Sbjct: 418 VVSTNIAETSLTIDGVVFVIDP 439
>sp|O43143|DHX15_HUMAN Putative pre-mRNA-splicing factor ATP-dependent RNA helicase DHX15
OS=Homo sapiens GN=DHX15 PE=1 SV=2
Length = 795
Score = 193 bits (491), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 94/212 (44%), Positives = 138/212 (65%), Gaps = 5/212 (2%)
Query: 10 SQMAEFPLEPNLSKMLIMSVHLQCSDEVLTIVSMLSVQNVFYRPKDKQALADQKKAKFNQ 69
S MAEFPL+P L+KM+I S CS+EVL+I +MLSV F RP + + AD+ K +F
Sbjct: 560 SMMAEFPLDPQLAKMVIASCDYNCSNEVLSITAMLSVPQCFVRPTEAKKAADEAKMRFAH 619
Query: 70 MEGDHITLLAVYNSWRNNKFSNAWCYENFVQIRTLKRAQDVRKQLLGIMDRHKLDVVSAG 129
++GDH+TLL VY++++ N S WCY+NF+ R+L A +VR+QL IMDR L S
Sbjct: 620 IDGDHLTLLNVYHAFKQNHESVQWCYDNFINYRSLMSADNVRQQLSRIMDRFNLPRRSTD 679
Query: 130 KNT----VRVQKAVCSGFFRNAAKKDPQEGYRTLVDSQVVYIHPSSALFNRQPEWVIYHE 185
+ + ++KA+ +G+F A + Y T+ D+QVV +HPS+ L + +PEWV+Y+E
Sbjct: 680 FTSRDYYINIRKALVTGYFMQVAHLERTGHYLTVKDNQVVQLHPSTVL-DHKPEWVLYNE 738
Query: 186 LVQTTKEYMREVTSIDPKWLVEFAPAFFKFSD 217
V TTK Y+R T I P+WLV+ AP ++ S+
Sbjct: 739 FVLTTKNYIRTCTDIKPEWLVKIAPQYYDMSN 770
Score = 108 bits (270), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 54/102 (52%), Positives = 73/102 (71%), Gaps = 1/102 (0%)
Query: 231 EPLQRTNRISFPPGLLKQAVKKRPEIKLIVTSATLDAVKFSSYFFEAPIFTIPGRTFPVE 290
E +RT G+LK+ V++R ++K+IV SATLDA KF YF P+ TIPGRT PVE
Sbjct: 261 EAHERTLATDILMGVLKEVVRQRSDLKVIVMSATLDAGKFQIYFDNCPLLTIPGRTHPVE 320
Query: 291 VLYTKEPETDYLDASLITVMQIHL-REPPGDVLLFLTGKLDV 331
+ YT EPE DYL+A++ TV+QIH+ E GD+LLFLTG+ ++
Sbjct: 321 IFYTPEPERDYLEAAIRTVIQIHMCEEEEGDLLLFLTGQEEI 362
Score = 88.6 bits (218), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 46/113 (40%), Positives = 70/113 (61%), Gaps = 5/113 (4%)
Query: 330 DVRKQLLGIMDRHKLDVVSAGKNT----VRVQKAVCSGFFRNAAKKDPQEGYRTLVDSQV 385
+VR+QL IMDR L S + + ++KA+ +G+F A + Y T+ D+QV
Sbjct: 659 NVRQQLSRIMDRFNLPRRSTDFTSRDYYINIRKALVTGYFMQVAHLERTGHYLTVKDNQV 718
Query: 386 VYIHPSSALFNRQPEWVIYHELVQTTKEYMREVTSIDPKWLVEFAPAFFKFSD 438
V +HPS+ L + +PEWV+Y+E V TTK Y+R T I P+WLV+ AP ++ S+
Sbjct: 719 VQLHPSTVL-DHKPEWVLYNEFVLTTKNYIRTCTDIKPEWLVKIAPQYYDMSN 770
Score = 87.8 bits (216), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 42/82 (51%), Positives = 57/82 (69%), Gaps = 6/82 (7%)
Query: 467 SREEIDTACEILYERMKSLGPDVPELIILPVYSALPSEMQTRIFEAAPPG------SRKV 520
+EEID AC+ + + LGP+V ++ I+P+YS LP + Q RIFE PP RKV
Sbjct: 358 GQEEIDEACKRIKREVDDLGPEVGDIKIIPLYSTLPPQQQQRIFEPPPPKKQNGAIGRKV 417
Query: 521 VIATNIAETSLTIDGIFYVVDP 542
V++TNIAETSLTIDG+ +V+DP
Sbjct: 418 VVSTNIAETSLTIDGVVFVIDP 439
>sp|O35286|DHX15_MOUSE Putative pre-mRNA-splicing factor ATP-dependent RNA helicase DHX15
OS=Mus musculus GN=Dhx15 PE=2 SV=2
Length = 795
Score = 193 bits (491), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 94/212 (44%), Positives = 138/212 (65%), Gaps = 5/212 (2%)
Query: 10 SQMAEFPLEPNLSKMLIMSVHLQCSDEVLTIVSMLSVQNVFYRPKDKQALADQKKAKFNQ 69
S MAEFPL+P L+KM+I S CS+EVL+I +MLSV F RP + + AD+ K +F
Sbjct: 560 SMMAEFPLDPQLAKMVIASCDYNCSNEVLSITAMLSVPQCFVRPTEAKKAADEAKMRFAH 619
Query: 70 MEGDHITLLAVYNSWRNNKFSNAWCYENFVQIRTLKRAQDVRKQLLGIMDRHKLDVVSAG 129
++GDH+TLL VY++++ N S WCY+NF+ R+L A +VR+QL IMDR L S
Sbjct: 620 IDGDHLTLLNVYHAFKQNHESVQWCYDNFINYRSLMSADNVRQQLSRIMDRFNLPRRSTD 679
Query: 130 KNT----VRVQKAVCSGFFRNAAKKDPQEGYRTLVDSQVVYIHPSSALFNRQPEWVIYHE 185
+ + ++KA+ +G+F A + Y T+ D+QVV +HPS+ L + +PEWV+Y+E
Sbjct: 680 FTSRDYYINIRKALVTGYFMQVAHLERTGHYLTVKDNQVVQLHPSTVL-DHKPEWVLYNE 738
Query: 186 LVQTTKEYMREVTSIDPKWLVEFAPAFFKFSD 217
V TTK Y+R T I P+WLV+ AP ++ S+
Sbjct: 739 FVLTTKNYIRTCTDIKPEWLVKIAPQYYDMSN 770
Score = 108 bits (269), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 54/102 (52%), Positives = 73/102 (71%), Gaps = 1/102 (0%)
Query: 231 EPLQRTNRISFPPGLLKQAVKKRPEIKLIVTSATLDAVKFSSYFFEAPIFTIPGRTFPVE 290
E +RT G+LK+ V++R ++K+IV SATLDA KF YF P+ TIPGRT PVE
Sbjct: 261 EAHERTLATDILMGVLKEVVRQRSDLKVIVMSATLDAGKFQIYFDNCPLLTIPGRTHPVE 320
Query: 291 VLYTKEPETDYLDASLITVMQIHL-REPPGDVLLFLTGKLDV 331
+ YT EPE DYL+A++ TV+QIH+ E GD+LLFLTG+ ++
Sbjct: 321 IFYTPEPERDYLEAAIRTVIQIHMCEEEEGDLLLFLTGQEEI 362
Score = 88.6 bits (218), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 46/113 (40%), Positives = 70/113 (61%), Gaps = 5/113 (4%)
Query: 330 DVRKQLLGIMDRHKLDVVSAGKNT----VRVQKAVCSGFFRNAAKKDPQEGYRTLVDSQV 385
+VR+QL IMDR L S + + ++KA+ +G+F A + Y T+ D+QV
Sbjct: 659 NVRQQLSRIMDRFNLPRRSTDFTSRDYYINIRKALVTGYFMQVAHLERTGHYLTVKDNQV 718
Query: 386 VYIHPSSALFNRQPEWVIYHELVQTTKEYMREVTSIDPKWLVEFAPAFFKFSD 438
V +HPS+ L + +PEWV+Y+E V TTK Y+R T I P+WLV+ AP ++ S+
Sbjct: 719 VQLHPSTVL-DHKPEWVLYNEFVLTTKNYIRTCTDIKPEWLVKIAPQYYDMSN 770
Score = 87.8 bits (216), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 42/82 (51%), Positives = 57/82 (69%), Gaps = 6/82 (7%)
Query: 467 SREEIDTACEILYERMKSLGPDVPELIILPVYSALPSEMQTRIFEAAPPG------SRKV 520
+EEID AC+ + + LGP+V ++ I+P+YS LP + Q RIFE PP RKV
Sbjct: 358 GQEEIDEACKRIKREVDDLGPEVGDIKIIPLYSTLPPQQQQRIFEPPPPKKQNGAIGRKV 417
Query: 521 VIATNIAETSLTIDGIFYVVDP 542
V++TNIAETSLTIDG+ +V+DP
Sbjct: 418 VVSTNIAETSLTIDGVVFVIDP 439
>sp|Q92620|PRP16_HUMAN Pre-mRNA-splicing factor ATP-dependent RNA helicase PRP16 OS=Homo
sapiens GN=DHX38 PE=1 SV=2
Length = 1227
Score = 192 bits (487), Expect = 8e-48, Method: Compositional matrix adjust.
Identities = 89/211 (42%), Positives = 133/211 (63%), Gaps = 2/211 (0%)
Query: 12 MAEFPLEPNLSKMLIMSVHLQCSDEVLTIVSMLSVQNVFYRPKDKQALADQKKAKFNQME 71
M EFPL+P LSKMLI+S + CS E+L IVSMLSV +FYRPK ++ +DQ + KF E
Sbjct: 946 MVEFPLDPALSKMLIVSCDMGCSSEILLIVSMLSVPAIFYRPKGREEESDQIREKFAVPE 1005
Query: 72 GDHITLLAVYNSWRNNKFSNAWCYENFVQIRTLKRAQDVRKQLLGIMDRHKLDVVSAGKN 131
DH+T L VY W+NN +S WC ++F+ + +++ ++VR QL IM + ++ + S G +
Sbjct: 1006 SDHLTYLNVYLQWKNNNYSTIWCNDHFIHAKAMRKVREVRAQLKDIMVQQRMSLASCGTD 1065
Query: 132 TVRVQKAVCSGFFRNAAKKDPQEGYRTLVDSQVVYIHPSSALFNRQ--PEWVIYHELVQT 189
V+K +C+ +F AAK Y + ++HP+S+LF P++++YHELV T
Sbjct: 1066 WDIVRKCICAAYFHQAAKLKGIGEYVNIRTGMPCHLHPTSSLFGMGYTPDYIVYHELVMT 1125
Query: 190 TKEYMREVTSIDPKWLVEFAPAFFKFSDPTK 220
TKEYM+ VT++D +WL E P F+ K
Sbjct: 1126 TKEYMQCVTAVDGEWLAELGPMFYSVKQAGK 1156
Score = 110 bits (274), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 45/88 (51%), Positives = 70/88 (79%)
Query: 244 GLLKQAVKKRPEIKLIVTSATLDAVKFSSYFFEAPIFTIPGRTFPVEVLYTKEPETDYLD 303
GLL++ V +R ++KLIVTSAT+DA KF+++F PIF IPGRTFPV++L++K P+ DY++
Sbjct: 666 GLLREVVARRSDLKLIVTSATMDAEKFAAFFGNVPIFHIPGRTFPVDILFSKTPQEDYVE 725
Query: 304 ASLITVMQIHLREPPGDVLLFLTGKLDV 331
A++ +Q+HL PGD+L+F+ G+ D+
Sbjct: 726 AAVKQSLQVHLSGAPGDILIFMPGQEDI 753
Score = 87.4 bits (215), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 42/114 (36%), Positives = 66/114 (57%), Gaps = 2/114 (1%)
Query: 330 DVRKQLLGIMDRHKLDVVSAGKNTVRVQKAVCSGFFRNAAKKDPQEGYRTLVDSQVVYIH 389
+VR QL IM + ++ + S G + V+K +C+ +F AAK Y + ++H
Sbjct: 1043 EVRAQLKDIMVQQRMSLASCGTDWDIVRKCICAAYFHQAAKLKGIGEYVNIRTGMPCHLH 1102
Query: 390 PSSALFNRQ--PEWVIYHELVQTTKEYMREVTSIDPKWLVEFAPAFFKFSDPTK 441
P+S+LF P++++YHELV TTKEYM+ VT++D +WL E P F+ K
Sbjct: 1103 PTSSLFGMGYTPDYIVYHELVMTTKEYMQCVTAVDGEWLAELGPMFYSVKQAGK 1156
Score = 82.0 bits (201), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 36/75 (48%), Positives = 55/75 (73%), Gaps = 1/75 (1%)
Query: 467 SREEIDTACEILYERMKSLGPDVPELIILPVYSALPSEMQTRIFEAAPPGSRKVVIATNI 526
+E+I+ + + E ++ L + P L +LP+YS LPS++Q +IF+ AP G RK ++ATNI
Sbjct: 749 GQEDIEVTSDQIVEHLEEL-ENAPALAVLPIYSQLPSDLQAKIFQKAPDGVRKCIVATNI 807
Query: 527 AETSLTIDGIFYVVD 541
AETSLT+DGI +V+D
Sbjct: 808 AETSLTVDGIMFVID 822
>sp|O42945|DHX15_SCHPO Probable pre-mRNA-splicing factor ATP-dependent RNA helicase prp43
OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843)
GN=prp43 PE=3 SV=1
Length = 735
Score = 190 bits (482), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 96/222 (43%), Positives = 148/222 (66%), Gaps = 7/222 (3%)
Query: 2 DSLVVTPISQMA-EFPLEPNLSKMLIMSVHLQCSDEVLTIVSMLSVQNVFYRPKDKQALA 60
D+ +TP+ + A EFPL+PNL+ MLI S CS+EVL++ ++LSV NVF RP + LA
Sbjct: 488 DNGDLTPLGRKASEFPLDPNLAVMLIRSPEFYCSNEVLSLTALLSVPNVFVRPNSARKLA 547
Query: 61 DQKKAKFNQMEGDHITLLAVYNSWRNNKFSNAWCYENFVQIRTLKRAQDVRKQLLGIMDR 120
D+ + +F +GDH+TLL VY+++++ + + WC+ +F+ R L A +VRKQL M+R
Sbjct: 548 DEMRQQFTHPDGDHLTLLNVYHAYKSGEGTADWCWNHFLSHRALISADNVRKQLRRTMER 607
Query: 121 HKLDVVSA---GKN-TVRVQKAVCSGFFRNAAKKDPQ-EGYRTLVDSQVVYIHPSSALFN 175
+++++S KN V +++A+ SGFF AKK + Y T+ D+QVV +HPS L +
Sbjct: 608 QEVELISTPFDDKNYYVNIRRALVSGFFMQVAKKSANGKNYVTMKDNQVVSLHPSCGL-S 666
Query: 176 RQPEWVIYHELVQTTKEYMREVTSIDPKWLVEFAPAFFKFSD 217
PEWV+Y+E V TTK ++R VT+I P+WL+E AP ++ D
Sbjct: 667 VTPEWVVYNEFVLTTKSFIRNVTAIRPEWLIELAPNYYDLDD 708
Score = 123 bits (309), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 55/101 (54%), Positives = 77/101 (76%)
Query: 231 EPLQRTNRISFPPGLLKQAVKKRPEIKLIVTSATLDAVKFSSYFFEAPIFTIPGRTFPVE 290
E +RT GL+K+ +RP++K+IV SATLDA KF YFF+AP+ +PGRT+PVE
Sbjct: 198 EAHERTLATDILMGLMKRLATRRPDLKIIVMSATLDAKKFQKYFFDAPLLAVPGRTYPVE 257
Query: 291 VLYTKEPETDYLDASLITVMQIHLREPPGDVLLFLTGKLDV 331
+ YT+EPE DYL+A+L TV+QIH+ E PGD+L+FLTG+ ++
Sbjct: 258 IYYTQEPERDYLEAALRTVLQIHVEEGPGDILVFLTGEEEI 298
Score = 95.5 bits (236), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 50/114 (43%), Positives = 75/114 (65%), Gaps = 6/114 (5%)
Query: 330 DVRKQLLGIMDRHKLDVVSA---GKNT-VRVQKAVCSGFFRNAAKKDPQ-EGYRTLVDSQ 384
+VRKQL M+R +++++S KN V +++A+ SGFF AKK + Y T+ D+Q
Sbjct: 596 NVRKQLRRTMERQEVELISTPFDDKNYYVNIRRALVSGFFMQVAKKSANGKNYVTMKDNQ 655
Query: 385 VVYIHPSSALFNRQPEWVIYHELVQTTKEYMREVTSIDPKWLVEFAPAFFKFSD 438
VV +HPS L + PEWV+Y+E V TTK ++R VT+I P+WL+E AP ++ D
Sbjct: 656 VVSLHPSCGL-SVTPEWVVYNEFVLTTKSFIRNVTAIRPEWLIELAPNYYDLDD 708
Score = 70.1 bits (170), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 44/87 (50%), Positives = 52/87 (59%), Gaps = 15/87 (17%)
Query: 467 SREEIDTAC-EILYE-----RMKSLGPDVPELIILPVYSALPSEMQTRIFEAAPPGS--- 517
EEI+ AC +I E R + GP L + P+Y +LP Q RIFE P +
Sbjct: 294 GEEEIEDACRKITLEADDLVREGAAGP----LKVYPLYGSLPPNQQQRIFEPTPEDTKSG 349
Query: 518 --RKVVIATNIAETSLTIDGIFYVVDP 542
RKVVI+TNIAETSLTIDGI YVVDP
Sbjct: 350 YGRKVVISTNIAETSLTIDGIVYVVDP 376
>sp|Q17R09|PRP16_BOVIN Pre-mRNA-splicing factor ATP-dependent RNA helicase PRP16 OS=Bos
taurus GN=DHX38 PE=2 SV=1
Length = 1227
Score = 190 bits (482), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 88/211 (41%), Positives = 133/211 (63%), Gaps = 2/211 (0%)
Query: 12 MAEFPLEPNLSKMLIMSVHLQCSDEVLTIVSMLSVQNVFYRPKDKQALADQKKAKFNQME 71
M EFPL+P LSKMLI+S + CS E+L IVSMLSV +FYRPK ++ +DQ + KF E
Sbjct: 946 MVEFPLDPALSKMLIVSCDMGCSSEILLIVSMLSVPAIFYRPKGREEESDQIREKFAVPE 1005
Query: 72 GDHITLLAVYNSWRNNKFSNAWCYENFVQIRTLKRAQDVRKQLLGIMDRHKLDVVSAGKN 131
DH++ L VY W+NN +S WC ++F+ + +++ ++VR QL IM + ++ + S G +
Sbjct: 1006 SDHLSYLNVYLQWKNNNYSTIWCNDHFIHAKAMRKVREVRAQLKDIMVQQRMSLASCGTD 1065
Query: 132 TVRVQKAVCSGFFRNAAKKDPQEGYRTLVDSQVVYIHPSSALFNRQ--PEWVIYHELVQT 189
V+K +C+ +F AAK Y + ++HP+S+LF P++++YHELV T
Sbjct: 1066 WDIVRKCICAAYFHQAAKLKGIGEYVNIRTGMPCHLHPTSSLFGMGYTPDYIVYHELVMT 1125
Query: 190 TKEYMREVTSIDPKWLVEFAPAFFKFSDPTK 220
TKEYM+ VT++D +WL E P F+ K
Sbjct: 1126 TKEYMQCVTAVDGEWLAELGPMFYSVKQAGK 1156
Score = 111 bits (277), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 46/88 (52%), Positives = 70/88 (79%)
Query: 244 GLLKQAVKKRPEIKLIVTSATLDAVKFSSYFFEAPIFTIPGRTFPVEVLYTKEPETDYLD 303
GLL++ V +R ++KLIVTSAT+DA KF+S+F PIF IPGRTFPV++L++K P+ DY++
Sbjct: 666 GLLREVVARRSDLKLIVTSATMDAEKFASFFGNVPIFHIPGRTFPVDILFSKTPQEDYVE 725
Query: 304 ASLITVMQIHLREPPGDVLLFLTGKLDV 331
A++ +Q+HL PGD+L+F+ G+ D+
Sbjct: 726 AAVKQSLQVHLSGAPGDILIFMPGQEDI 753
Score = 86.7 bits (213), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 42/114 (36%), Positives = 66/114 (57%), Gaps = 2/114 (1%)
Query: 330 DVRKQLLGIMDRHKLDVVSAGKNTVRVQKAVCSGFFRNAAKKDPQEGYRTLVDSQVVYIH 389
+VR QL IM + ++ + S G + V+K +C+ +F AAK Y + ++H
Sbjct: 1043 EVRAQLKDIMVQQRMSLASCGTDWDIVRKCICAAYFHQAAKLKGIGEYVNIRTGMPCHLH 1102
Query: 390 PSSALFNRQ--PEWVIYHELVQTTKEYMREVTSIDPKWLVEFAPAFFKFSDPTK 441
P+S+LF P++++YHELV TTKEYM+ VT++D +WL E P F+ K
Sbjct: 1103 PTSSLFGMGYTPDYIVYHELVMTTKEYMQCVTAVDGEWLAELGPMFYSVKQAGK 1156
Score = 82.0 bits (201), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 36/75 (48%), Positives = 55/75 (73%), Gaps = 1/75 (1%)
Query: 467 SREEIDTACEILYERMKSLGPDVPELIILPVYSALPSEMQTRIFEAAPPGSRKVVIATNI 526
+E+I+ + + E ++ L + P L +LP+YS LPS++Q +IF+ AP G RK ++ATNI
Sbjct: 749 GQEDIEVTSDQIVEHLEEL-ENAPALAVLPIYSQLPSDLQAKIFQKAPDGVRKCIVATNI 807
Query: 527 AETSLTIDGIFYVVD 541
AETSLT+DGI +V+D
Sbjct: 808 AETSLTVDGIMFVID 822
>sp|Q9P774|PRP16_SCHPO Pre-mRNA-splicing factor ATP-dependent RNA helicase prp16
OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843)
GN=prp16 PE=3 SV=2
Length = 1173
Score = 187 bits (474), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 88/211 (41%), Positives = 140/211 (66%), Gaps = 3/211 (1%)
Query: 5 VVTPISQMAEFPLEPNLSKMLIMSVHLQCSDEVLTIVSMLSVQNVFYRPKDKQALADQKK 64
+ T +M+ FP++P+LSK++I++ +C++E++TIVSMLSV +VFYRPK++ +D +
Sbjct: 899 LTTLGKKMSLFPMDPSLSKLIIIAEDYKCTEEIITIVSMLSVPSVFYRPKERAEESDAAR 958
Query: 65 AKFNQMEGDHITLLAVYNSWRNNKFSNAWCYENFVQIRTLKRAQDVRKQLLGIMDRHKLD 124
KFN E DH+ LL +Y W+ N +SN+WC ++F+ +TLKRA+D+R+QL+ IM + K+
Sbjct: 959 EKFNVPESDHLMLLNIYQHWQRNGYSNSWCSKHFLHSKTLKRARDIRQQLVEIMSKQKIS 1018
Query: 125 VVSAGKNTVRVQKAVCSGFFRNAAKKDPQEGYRTLVDSQVVYIHPSSALFNRQ--PEWVI 182
+ S + V++ +CS +F AA Y L ++H +S+L+ P++VI
Sbjct: 1019 LESVSDWDI-VRRVLCSAYFHQAACAKGIGEYVHLRSGMPCHLHVTSSLYGLGYLPDYVI 1077
Query: 183 YHELVQTTKEYMREVTSIDPKWLVEFAPAFF 213
YHELV T+KEYM VTS+DP WL EF ++
Sbjct: 1078 YHELVLTSKEYMNIVTSVDPYWLAEFGGVYY 1108
Score = 113 bits (282), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 51/111 (45%), Positives = 79/111 (71%)
Query: 231 EPLQRTNRISFPPGLLKQAVKKRPEIKLIVTSATLDAVKFSSYFFEAPIFTIPGRTFPVE 290
E +R+ GLLK+ + +R +IKL+VTSAT+++ KFS +F AP FTIPGRT+PV+
Sbjct: 613 EAHERSLNTDILMGLLKKVLSRRRDIKLLVTSATMNSQKFSDFFGGAPQFTIPGRTYPVD 672
Query: 291 VLYTKEPETDYLDASLITVMQIHLREPPGDVLLFLTGKLDVRKQLLGIMDR 341
+++ K P +DY++A++ V+QIHL +P GD+L+F+TG+ D+ I DR
Sbjct: 673 IMFAKAPCSDYVEAAVRQVLQIHLSQPAGDILVFMTGQEDIEATCEIIADR 723
Score = 93.2 bits (230), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 42/75 (56%), Positives = 58/75 (77%), Gaps = 1/75 (1%)
Query: 467 SREEIDTACEILYERMKSLGPDVPELIILPVYSALPSEMQTRIFEAAPPGSRKVVIATNI 526
+E+I+ CEI+ +R+ L D P L ILP+YS +P+++Q +IF++A PG RKVV+ATNI
Sbjct: 709 GQEDIEATCEIIADRLNQL-HDAPRLSILPIYSQMPADLQAKIFDSAEPGVRKVVVATNI 767
Query: 527 AETSLTIDGIFYVVD 541
AETSLT+ GI YVVD
Sbjct: 768 AETSLTVHGISYVVD 782
Score = 79.3 bits (194), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 41/107 (38%), Positives = 63/107 (58%), Gaps = 3/107 (2%)
Query: 330 DVRKQLLGIMDRHKLDVVSAGKNTVRVQKAVCSGFFRNAAKKDPQEGYRTLVDSQVVYIH 389
D+R+QL+ IM + K+ + S + V++ +CS +F AA Y L ++H
Sbjct: 1003 DIRQQLVEIMSKQKISLESVSDWDI-VRRVLCSAYFHQAACAKGIGEYVHLRSGMPCHLH 1061
Query: 390 PSSALFNRQ--PEWVIYHELVQTTKEYMREVTSIDPKWLVEFAPAFF 434
+S+L+ P++VIYHELV T+KEYM VTS+DP WL EF ++
Sbjct: 1062 VTSSLYGLGYLPDYVIYHELVLTSKEYMNIVTSVDPYWLAEFGGVYY 1108
>sp|P53131|PRP43_YEAST Pre-mRNA-splicing factor ATP-dependent RNA helicase PRP43
OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c)
GN=PRP43 PE=1 SV=1
Length = 767
Score = 182 bits (461), Expect = 7e-45, Method: Compositional matrix adjust.
Identities = 96/226 (42%), Positives = 146/226 (64%), Gaps = 11/226 (4%)
Query: 2 DSLVVTPISQMA-EFPLEPNLSKMLIMSVHLQCSDEVLTIVSMLSVQNVFYRPKDKQALA 60
D +TP+ ++A +FPL+P L+ MLI S QCS E+LTIV+MLSV NVF RP + A
Sbjct: 506 DEGNLTPLGRLASQFPLDPMLAVMLIGSFEFQCSQEILTIVAMLSVPNVFIRPTKDKKRA 565
Query: 61 DQKKAKFNQMEGDHITLLAVYNSWRNNKFS----NAWCYENFVQIRTLKRAQDVRKQLLG 116
D K F +GDHITLL VY+++++++ + WC ++++ R+L A ++R QL
Sbjct: 566 DDAKNIFAHPDGDHITLLNVYHAFKSDEAYEYGIHKWCRDHYLNYRSLSAADNIRSQLER 625
Query: 117 IMDRHKLDVVSAGKNTVR----VQKAVCSGFFRNAAKK-DPQEGYRTLVDSQVVYIHPSS 171
+M+R+ L++ + + + ++KA+ SGFF AKK +GY T+ D+Q V IHPS+
Sbjct: 626 LMNRYNLELNTTDYESPKYFDNIRKALASGFFMQVAKKRSGAKGYITVKDNQDVLIHPST 685
Query: 172 ALFNRQPEWVIYHELVQTTKEYMREVTSIDPKWLVEFAPAFFKFSD 217
L EWVIY+E V T+K Y+R VTS+ P+WL+E APA++ S+
Sbjct: 686 VL-GHDAEWVIYNEFVLTSKNYIRTVTSVRPEWLIEIAPAYYDLSN 730
Score = 114 bits (286), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 54/101 (53%), Positives = 74/101 (73%)
Query: 231 EPLQRTNRISFPPGLLKQAVKKRPEIKLIVTSATLDAVKFSSYFFEAPIFTIPGRTFPVE 290
E +RT GLLKQ VK+RP++K+I+ SATLDA KF YF +AP+ +PGRT+PVE
Sbjct: 216 EAHERTLATDILMGLLKQVVKRRPDLKIIIMSATLDAEKFQRYFNDAPLLAVPGRTYPVE 275
Query: 291 VLYTKEPETDYLDASLITVMQIHLREPPGDVLLFLTGKLDV 331
+ YT E + DYLD+++ TV+QIH E GD+LLFLTG+ ++
Sbjct: 276 LYYTPEFQRDYLDSAIRTVLQIHATEEAGDILLFLTGEDEI 316
Score = 93.6 bits (231), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 49/119 (41%), Positives = 76/119 (63%), Gaps = 6/119 (5%)
Query: 325 LTGKLDVRKQLLGIMDRHKLDVVSAGKNTVR----VQKAVCSGFFRNAAKK-DPQEGYRT 379
L+ ++R QL +M+R+ L++ + + + ++KA+ SGFF AKK +GY T
Sbjct: 613 LSAADNIRSQLERLMNRYNLELNTTDYESPKYFDNIRKALASGFFMQVAKKRSGAKGYIT 672
Query: 380 LVDSQVVYIHPSSALFNRQPEWVIYHELVQTTKEYMREVTSIDPKWLVEFAPAFFKFSD 438
+ D+Q V IHPS+ L EWVIY+E V T+K Y+R VTS+ P+WL+E APA++ S+
Sbjct: 673 VKDNQDVLIHPSTVL-GHDAEWVIYNEFVLTSKNYIRTVTSVRPEWLIEIAPAYYDLSN 730
Score = 70.5 bits (171), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 40/68 (58%), Positives = 45/68 (66%), Gaps = 11/68 (16%)
Query: 481 RMKSLGPDVPELIILPVYSALPSEMQTRIFEAAP------PGSRKVVIATNIAETSLTID 534
R + GP L + P+Y +LP Q RIFE AP PG RKVVI+TNIAETSLTID
Sbjct: 332 REEGCGP----LSVYPLYGSLPPHQQQRIFEPAPESHNGRPG-RKVVISTNIAETSLTID 386
Query: 535 GIFYVVDP 542
GI YVVDP
Sbjct: 387 GIVYVVDP 394
>sp|Q5RBD4|DHX35_PONAB Probable ATP-dependent RNA helicase DHX35 OS=Pongo abelii GN=DHX35
PE=2 SV=1
Length = 720
Score = 171 bits (432), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 83/215 (38%), Positives = 138/215 (64%), Gaps = 2/215 (0%)
Query: 2 DSLVVTPIS-QMAEFPLEPNLSKMLIMSVHLQCSDEVLTIVSMLSVQNVFYRPKDKQALA 60
D + P+ ++AEFPL P +KML+ S + CS E+L+I +M+ +QN+F P ++++ A
Sbjct: 472 DCRLTEPLGMRIAEFPLNPMFAKMLLESGNFGCSQEILSIAAMMQIQNIFVVPPNQKSQA 531
Query: 61 DQKKAKFNQMEGDHITLLAVYNSWRNNKFSNAWCYENFVQIRTLKRAQDVRKQLLGIMDR 120
+ KF EGDH+T+L VY ++ + ++ WC E+F+ + L RA VR+QL ++ +
Sbjct: 532 IRVHRKFAVEEGDHLTMLNVYEAFIKHNKNSQWCQEHFLNYKGLVRAATVREQLKKLLVK 591
Query: 121 HKLDVVSAGKNTVRVQKAVCSGFFRNAAKKDPQEGYRTLVDSQVVYIHPSSALF-NRQPE 179
++ S+ + V + + SGFF NAA+ YRT+ D ++IHP+S L+ + P
Sbjct: 592 FQVPKKSSEGDPDPVLRCIVSGFFANAARFHSTGAYRTIRDDHELHIHPASVLYAEKPPR 651
Query: 180 WVIYHELVQTTKEYMREVTSIDPKWLVEFAPAFFK 214
WVIY+E++QT+K YMR+VT+I+ WL+E AP F++
Sbjct: 652 WVIYNEVIQTSKYYMRDVTAIESAWLLELAPHFYQ 686
Score = 89.4 bits (220), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 43/106 (40%), Positives = 70/106 (66%), Gaps = 1/106 (0%)
Query: 331 VRKQLLGIMDRHKLDVVSAGKNTVRVQKAVCSGFFRNAAKKDPQEGYRTLVDSQVVYIHP 390
VR+QL ++ + ++ S+ + V + + SGFF NAA+ YRT+ D ++IHP
Sbjct: 581 VREQLKKLLVKFQVPKKSSEGDPDPVLRCIVSGFFANAARFHSTGAYRTIRDDHELHIHP 640
Query: 391 SSALFNRQP-EWVIYHELVQTTKEYMREVTSIDPKWLVEFAPAFFK 435
+S L+ +P WVIY+E++QT+K YMR+VT+I+ WL+E AP F++
Sbjct: 641 ASVLYAEKPPRWVIYNEVIQTSKYYMRDVTAIESAWLLELAPHFYQ 686
Score = 87.0 bits (214), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 54/150 (36%), Positives = 84/150 (56%), Gaps = 11/150 (7%)
Query: 217 DPTKLSKFKKNQRLEPLQRTNRISFPPGLLKQAVKKRPEIKLIVTSATLDAVKFSSYFFE 276
DP L+K+ E +RT GLLK+ KKR +++LIV SATLDA KF +F +
Sbjct: 164 DPL-LTKYSVIMLDEAHERTLYTDIAIGLLKKIQKKRGDLRLIVASATLDADKFRDFFNQ 222
Query: 277 ----------APIFTIPGRTFPVEVLYTKEPETDYLDASLITVMQIHLREPPGDVLLFLT 326
I T+ GRTFPV++ Y + P DY+ +++ TV++IH E GD+L FLT
Sbjct: 223 NETSDPARDTCVILTVGGRTFPVDIFYLQSPVPDYIKSTVETVVKIHQTEGDGDILAFLT 282
Query: 327 GKLDVRKQLLGIMDRHKLDVVSAGKNTVRV 356
G+ +V + ++++ + + K +RV
Sbjct: 283 GQEEVETVVSMLIEQARALARTGMKRHLRV 312
Score = 67.8 bits (164), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 35/88 (39%), Positives = 57/88 (64%), Gaps = 2/88 (2%)
Query: 463 AWRISREEIDTACEILYERMKSLGPDVPE--LIILPVYSALPSEMQTRIFEAAPPGSRKV 520
A+ +EE++T +L E+ ++L + L +LP+Y+ LPS Q ++FE RKV
Sbjct: 279 AFLTGQEEVETVVSMLIEQARALARTGMKRHLRVLPMYAGLPSFEQMKVFERVSRSVRKV 338
Query: 521 VIATNIAETSLTIDGIFYVVDPFDIEVR 548
++ATN+AETS+TI GI YV+D +++R
Sbjct: 339 IVATNVAETSITISGIVYVIDCGFVKLR 366
>sp|Q9H5Z1|DHX35_HUMAN Probable ATP-dependent RNA helicase DHX35 OS=Homo sapiens GN=DHX35
PE=1 SV=2
Length = 703
Score = 170 bits (431), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 82/215 (38%), Positives = 137/215 (63%), Gaps = 2/215 (0%)
Query: 2 DSLVVTPIS-QMAEFPLEPNLSKMLIMSVHLQCSDEVLTIVSMLSVQNVFYRPKDKQALA 60
D + P+ ++AEFPL P +KML+ S + CS E+L+I +M+ +QN+F P ++++ A
Sbjct: 472 DCRLTEPLGMRIAEFPLNPMFAKMLLESGNFGCSQEILSIAAMMQIQNIFVVPPNQKSHA 531
Query: 61 DQKKAKFNQMEGDHITLLAVYNSWRNNKFSNAWCYENFVQIRTLKRAQDVRKQLLGIMDR 120
+ KF EGDH+T+L +Y ++ + + WC E+F+ + L RA VR+QL ++ +
Sbjct: 532 IRVHRKFAVEEGDHLTMLNIYEAFIKHNKDSKWCQEHFLNYKGLVRAATVREQLKKLLVK 591
Query: 121 HKLDVVSAGKNTVRVQKAVCSGFFRNAAKKDPQEGYRTLVDSQVVYIHPSSALF-NRQPE 179
++ S+ + V + + SGFF NAA+ YRT+ D ++IHP+S L+ + P
Sbjct: 592 FQVPRKSSEGDPDLVLRCIVSGFFANAARFHSTGAYRTIRDDHELHIHPASVLYAEKPPR 651
Query: 180 WVIYHELVQTTKEYMREVTSIDPKWLVEFAPAFFK 214
WVIY+E++QT+K YMR+VT+I+ WL+E AP F++
Sbjct: 652 WVIYNEVIQTSKYYMRDVTAIESAWLLELAPHFYQ 686
Score = 89.7 bits (221), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 43/106 (40%), Positives = 70/106 (66%), Gaps = 1/106 (0%)
Query: 331 VRKQLLGIMDRHKLDVVSAGKNTVRVQKAVCSGFFRNAAKKDPQEGYRTLVDSQVVYIHP 390
VR+QL ++ + ++ S+ + V + + SGFF NAA+ YRT+ D ++IHP
Sbjct: 581 VREQLKKLLVKFQVPRKSSEGDPDLVLRCIVSGFFANAARFHSTGAYRTIRDDHELHIHP 640
Query: 391 SSALF-NRQPEWVIYHELVQTTKEYMREVTSIDPKWLVEFAPAFFK 435
+S L+ + P WVIY+E++QT+K YMR+VT+I+ WL+E AP F++
Sbjct: 641 ASVLYAEKPPRWVIYNEVIQTSKYYMRDVTAIESAWLLELAPHFYQ 686
Score = 87.4 bits (215), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 55/150 (36%), Positives = 84/150 (56%), Gaps = 11/150 (7%)
Query: 217 DPTKLSKFKKNQRLEPLQRTNRISFPPGLLKQAVKKRPEIKLIVTSATLDAVKFSSYFFE 276
DP L+K+ E +RT GLLK+ KKR +++LIV SATLDA KF +F +
Sbjct: 164 DPL-LTKYSVIMLDEAHERTLYTDIAIGLLKKIQKKRGDLRLIVASATLDADKFRDFFNQ 222
Query: 277 ----------APIFTIPGRTFPVEVLYTKEPETDYLDASLITVMQIHLREPPGDVLLFLT 326
I T+ GRTFPV++ Y + P DY+ +++ TV++IH E GDVL FLT
Sbjct: 223 NETSDPARDTCVILTVEGRTFPVDIFYLQSPVPDYIKSTVETVVKIHQTEGDGDVLAFLT 282
Query: 327 GKLDVRKQLLGIMDRHKLDVVSAGKNTVRV 356
G+ +V + ++++ + + K +RV
Sbjct: 283 GQEEVETVVSMLIEQARALARTGMKRHLRV 312
Score = 67.8 bits (164), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 35/88 (39%), Positives = 57/88 (64%), Gaps = 2/88 (2%)
Query: 463 AWRISREEIDTACEILYERMKSLGPDVPE--LIILPVYSALPSEMQTRIFEAAPPGSRKV 520
A+ +EE++T +L E+ ++L + L +LP+Y+ LPS Q ++FE RKV
Sbjct: 279 AFLTGQEEVETVVSMLIEQARALARTGMKRHLRVLPMYAGLPSFEQMKVFERVSRSVRKV 338
Query: 521 VIATNIAETSLTIDGIFYVVDPFDIEVR 548
++ATN+AETS+TI GI YV+D +++R
Sbjct: 339 IVATNVAETSITISGIVYVIDCGFVKLR 366
>sp|Q9H6R0|DHX33_HUMAN Putative ATP-dependent RNA helicase DHX33 OS=Homo sapiens GN=DHX33
PE=1 SV=2
Length = 707
Score = 165 bits (417), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 82/214 (38%), Positives = 125/214 (58%), Gaps = 1/214 (0%)
Query: 2 DSLVVTPIS-QMAEFPLEPNLSKMLIMSVHLQCSDEVLTIVSMLSVQNVFYRPKDKQALA 60
D L +TP+ +MA FPLEP +K ++MS C++E+LTIVS+LSV +V + P ++
Sbjct: 486 DQLTLTPMGRKMAAFPLEPKFAKTILMSPKFHCTEEILTIVSLLSVDSVLHNPPSRREEV 545
Query: 61 DQKKAKFNQMEGDHITLLAVYNSWRNNKFSNAWCYENFVQIRTLKRAQDVRKQLLGIMDR 120
+ KF EGDH+TLL +Y +++N + WC ENFV + + +VR QL I +
Sbjct: 546 QGVRKKFISSEGDHMTLLNIYRTFKNLGGNKDWCKENFVNSKNMTLVAEVRAQLRDICLK 605
Query: 121 HKLDVVSAGKNTVRVQKAVCSGFFRNAAKKDPQEGYRTLVDSQVVYIHPSSALFNRQPEW 180
+ + S+ + V++ + F + A+ P Y T Q V IHPSS LF+ +P
Sbjct: 606 MSMPIASSRGDVESVRRCLAHSLFMSTAELQPDGTYATTDTHQPVAIHPSSVLFHCKPAC 665
Query: 181 VIYHELVQTTKEYMREVTSIDPKWLVEFAPAFFK 214
V+Y EL+ T K YMR++ ID +WL E AP +F+
Sbjct: 666 VVYTELLYTNKCYMRDLCVIDAQWLYEAAPEYFR 699
Score = 85.5 bits (210), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 43/94 (45%), Positives = 63/94 (67%), Gaps = 6/94 (6%)
Query: 244 GLLKQAVKKRPEI-----KLIVTSATLDAVKFSSYFFEAPIFTIPGRTFPVEVLYTKEPE 298
G++K A K+R E+ K+IV SAT+D FS YF AP+ + GR P++V YTK+P+
Sbjct: 208 GVVKAAQKRRKELGKLPLKVIVMSATMDVDLFSQYFNGAPVLYLEGRQHPIQVFYTKQPQ 267
Query: 299 TDYLDASLITVMQIHLREPPG-DVLLFLTGKLDV 331
DYL A+L++V QIH P D+L+FLTG+ ++
Sbjct: 268 NDYLHAALVSVFQIHQEAPSSQDILVFLTGQEEI 301
Score = 76.6 bits (187), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 36/75 (48%), Positives = 51/75 (68%)
Query: 467 SREEIDTACEILYERMKSLGPDVPELIILPVYSALPSEMQTRIFEAAPPGSRKVVIATNI 526
+EEI+ + + K L P +++LP+Y++LP Q R+F+ AP G RKV+I+TNI
Sbjct: 297 GQEEIEAMSKTCRDIAKHLPDGCPAMLVLPLYASLPYAQQLRVFQGAPKGYRKVIISTNI 356
Query: 527 AETSLTIDGIFYVVD 541
AETS+TI GI YVVD
Sbjct: 357 AETSITITGIKYVVD 371
Score = 76.3 bits (186), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 39/106 (36%), Positives = 59/106 (55%)
Query: 330 DVRKQLLGIMDRHKLDVVSAGKNTVRVQKAVCSGFFRNAAKKDPQEGYRTLVDSQVVYIH 389
+VR QL I + + + S+ + V++ + F + A+ P Y T Q V IH
Sbjct: 594 EVRAQLRDICLKMSMPIASSRGDVESVRRCLAHSLFMSTAELQPDGTYATTDTHQPVAIH 653
Query: 390 PSSALFNRQPEWVIYHELVQTTKEYMREVTSIDPKWLVEFAPAFFK 435
PSS LF+ +P V+Y EL+ T K YMR++ ID +WL E AP +F+
Sbjct: 654 PSSVLFHCKPACVVYTELLYTNKCYMRDLCVIDAQWLYEAAPEYFR 699
>sp|Q80VY9|DHX33_MOUSE Putative ATP-dependent RNA helicase DHX33 OS=Mus musculus GN=Dhx33
PE=1 SV=1
Length = 698
Score = 162 bits (409), Expect = 7e-39, Method: Compositional matrix adjust.
Identities = 82/214 (38%), Positives = 124/214 (57%), Gaps = 1/214 (0%)
Query: 2 DSLVVTPIS-QMAEFPLEPNLSKMLIMSVHLQCSDEVLTIVSMLSVQNVFYRPKDKQALA 60
D L +TPI +MA FPLEP +K +++S C++E+LTIVS+LSV +V Y P ++
Sbjct: 477 DQLTLTPIGRKMAAFPLEPRFAKTILLSSKFHCTEEILTIVSLLSVDSVLYNPPARRDEV 536
Query: 61 DQKKAKFNQMEGDHITLLAVYNSWRNNKFSNAWCYENFVQIRTLKRAQDVRKQLLGIMDR 120
+ KF EGDHITLL +Y +++N + WC ENFV + + +VR QL I +
Sbjct: 537 QSVRKKFISSEGDHITLLNIYRTFKNIGGNKDWCKENFVNSKNMLLVAEVRAQLREICLK 596
Query: 121 HKLDVVSAGKNTVRVQKAVCSGFFRNAAKKDPQEGYRTLVDSQVVYIHPSSALFNRQPEW 180
+ ++S+ + V++ + F N A+ Y T Q V IHPSS LF+ +P
Sbjct: 597 MSMPIMSSRGDMESVRRCMAHSLFMNTAELQTDGTYATTDTHQPVAIHPSSVLFHCKPAC 656
Query: 181 VIYHELVQTTKEYMREVTSIDPKWLVEFAPAFFK 214
V+Y L+ T K YMR++ +D +WL E AP +F+
Sbjct: 657 VVYTSLLYTNKCYMRDLCVVDAEWLYEAAPDYFR 690
Score = 85.5 bits (210), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 42/94 (44%), Positives = 63/94 (67%), Gaps = 6/94 (6%)
Query: 244 GLLKQAVKKRPEI-----KLIVTSATLDAVKFSSYFFEAPIFTIPGRTFPVEVLYTKEPE 298
G++K A K+R E+ K+IV SAT+D FS YF AP+ + GR P+++ YTK+P+
Sbjct: 199 GVVKTAQKRRKELGKLPLKVIVMSATMDVDLFSQYFNRAPVLYLEGRQHPIQIFYTKQPQ 258
Query: 299 TDYLDASLITVMQIHLREPPG-DVLLFLTGKLDV 331
DYL A+L++V QIH P D+L+FLTG+ ++
Sbjct: 259 QDYLHAALVSVFQIHQEAPASQDILVFLTGQEEI 292
Score = 76.3 bits (186), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 35/75 (46%), Positives = 51/75 (68%)
Query: 467 SREEIDTACEILYERMKSLGPDVPELIILPVYSALPSEMQTRIFEAAPPGSRKVVIATNI 526
+EEI+ + + + L P +++LP+Y++LP Q R+F+ AP G RKV+I+TNI
Sbjct: 288 GQEEIEAMSKTCRDIARHLPDGCPSMLVLPLYASLPYSQQLRVFQGAPKGYRKVIISTNI 347
Query: 527 AETSLTIDGIFYVVD 541
AETS+TI GI YVVD
Sbjct: 348 AETSITITGIKYVVD 362
Score = 71.6 bits (174), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 37/106 (34%), Positives = 58/106 (54%)
Query: 330 DVRKQLLGIMDRHKLDVVSAGKNTVRVQKAVCSGFFRNAAKKDPQEGYRTLVDSQVVYIH 389
+VR QL I + + ++S+ + V++ + F N A+ Y T Q V IH
Sbjct: 585 EVRAQLREICLKMSMPIMSSRGDMESVRRCMAHSLFMNTAELQTDGTYATTDTHQPVAIH 644
Query: 390 PSSALFNRQPEWVIYHELVQTTKEYMREVTSIDPKWLVEFAPAFFK 435
PSS LF+ +P V+Y L+ T K YMR++ +D +WL E AP +F+
Sbjct: 645 PSSVLFHCKPACVVYTSLLYTNKCYMRDLCVVDAEWLYEAAPDYFR 690
>sp|Q9BKQ8|DHX35_CAEEL Probable ATP-dependent RNA helicase DHX35 homolog OS=Caenorhabditis
elegans GN=Y67D2.6 PE=3 SV=1
Length = 732
Score = 145 bits (366), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 80/227 (35%), Positives = 137/227 (60%), Gaps = 9/227 (3%)
Query: 3 SLVVTPIS-QMAEFPLEPNLSKMLIMSVHLQCSDEVLTIVSMLSVQNVFYRPKDKQALAD 61
S + +P+ QMAEFPL P SK L+ S CS E++TIV+M+ +Q+VF P ++ AD
Sbjct: 492 SQLTSPLGLQMAEFPLPPMHSKCLLKSAEFGCSTEMVTIVAMMQIQDVFITPYRQRHQAD 551
Query: 62 QKKAKFNQMEGDHITLLAVYNSWRNNKFSNAWCYENFVQIRTLKRAQDVRKQLLGIMDRH 121
+ KF EGDH+T+L V+ + N S WC ++FV R L RA +VR QL+ ++ R
Sbjct: 552 VIRKKFAVEEGDHMTMLNVFTKFVENGRSKKWCSDHFVNYRGLMRADNVRSQLVRLLKRF 611
Query: 122 KLDVVSAG---KNTVRVQKAVCSGFFRNAAKKDPQEGYRTLVDSQVVYIHPSSALFNRQ- 177
+++ VS+ + +++ + +GFF AA+ Y T+ +S ++ S++ ++
Sbjct: 612 EIEKVSSRGLINCSENIRQCLVTGFFSQAAQYHYTGKYMTVKESFPFNMYKGSSIMFKKD 671
Query: 178 -PEWVIYHELVQTTKEYMREVTSIDPKWLVEFAPAFFKFSDPTKLSK 223
P+WVI+ E++Q + +R+VT I+P+WL E AP +++F +L++
Sbjct: 672 YPKWVIFTEVMQDS---IRDVTVIEPEWLYELAPHYYEFGTEGELAE 715
Score = 77.8 bits (190), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 47/127 (37%), Positives = 72/127 (56%), Gaps = 11/127 (8%)
Query: 215 FSDPTKLSKFKKNQRLEPLQRTNRISFPPGLLKQAVKKRPEIKLIVTSATLDAVKFSSYF 274
+DP LSK+ E +R+ GLL++ ++ R ++++IV+SATLDA F +F
Sbjct: 184 LADPL-LSKYSIIMIDEAHERSCNTDILLGLLRKIIQIRNDLRIIVSSATLDAELFKDFF 242
Query: 275 F----------EAPIFTIPGRTFPVEVLYTKEPETDYLDASLITVMQIHLREPPGDVLLF 324
A I ++ GRT PV V +TK DY +++ TV+ IH E PGD+L+F
Sbjct: 243 EMNETGNSDKDTAGIISVEGRTHPVAVHHTKTSVPDYCQSAVDTVINIHKHENPGDILVF 302
Query: 325 LTGKLDV 331
LTG+ +V
Sbjct: 303 LTGQDEV 309
Score = 73.9 bits (180), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 38/96 (39%), Positives = 60/96 (62%), Gaps = 4/96 (4%)
Query: 456 NKYEEPN---AWRISREEIDTACEILYERMKSLGPDVPELIILPVYSALPSEMQTRIFEA 512
+K+E P + ++E++ CE L E +L + L ++P Y ALP+ Q + F++
Sbjct: 291 HKHENPGDILVFLTGQDEVEDVCEKLRELAGNL-KNCDRLWVVPCYGALPAREQMKAFDS 349
Query: 513 APPGSRKVVIATNIAETSLTIDGIFYVVDPFDIEVR 548
P G+RKVV+ATNIAE S+TI GI YV+D +++R
Sbjct: 350 TPHGTRKVVVATNIAEASITIPGICYVIDTGYVKLR 385
Score = 59.3 bits (142), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 34/120 (28%), Positives = 72/120 (60%), Gaps = 8/120 (6%)
Query: 330 DVRKQLLGIMDRHKLDVVSAG---KNTVRVQKAVCSGFFRNAAKKDPQEGYRTLVDSQVV 386
+VR QL+ ++ R +++ VS+ + +++ + +GFF AA+ Y T+ +S
Sbjct: 599 NVRSQLVRLLKRFEIEKVSSRGLINCSENIRQCLVTGFFSQAAQYHYTGKYMTVKESFPF 658
Query: 387 YIHPSSALFNRQ--PEWVIYHELVQTTKEYMREVTSIDPKWLVEFAPAFFKFSDPTKLSK 444
++ S++ ++ P+WVI+ E++Q + +R+VT I+P+WL E AP +++F +L++
Sbjct: 659 NMYKGSSIMFKKDYPKWVIFTEVMQDS---IRDVTVIEPEWLYELAPHYYEFGTEGELAE 715
>sp|Q03319|PRH1_SCHPO Probable ATP-dependent RNA helicase prh1 OS=Schizosaccharomyces
pombe (strain 972 / ATCC 24843) GN=prh1 PE=3 SV=2
Length = 719
Score = 131 bits (329), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 72/206 (34%), Positives = 116/206 (56%), Gaps = 3/206 (1%)
Query: 11 QMAEFPLEPNLSKMLIMSVHLQCSDEVLTIVSMLSVQNVFYRPKDKQALADQKKAKFNQM 70
QM+ PL P+L++ ++ + C EV+ +VS LS ++F P++K+ A + + KF
Sbjct: 509 QMSLIPLLPSLARAVLAAREHNCLSEVIDVVSCLSTDSMFLFPQEKRDEAIEARLKFLHS 568
Query: 71 EGDHITLLAVYNSWRNNKFSN--AWCYENFVQIRTLKRAQDVRKQLLGIMDRHKLDVVSA 128
EGD +T L + + + WC +NF+ R LK D+RKQL + ++ S+
Sbjct: 569 EGDLLTCLNALRQYLESSHDSRKQWCSQNFINRRALKTILDIRKQLREHCLKDGWELNSS 628
Query: 129 GK-NTVRVQKAVCSGFFRNAAKKDPQEGYRTLVDSQVVYIHPSSALFNRQPEWVIYHELV 187
+ N+ + + SG+ N A P YRT++ +Q + IHPSS+LF ++ E ++YHELV
Sbjct: 629 PEVNSENLLLSFLSGYITNTALLHPDGSYRTIIGNQTISIHPSSSLFGKKVEAIMYHELV 688
Query: 188 QTTKEYMREVTSIDPKWLVEFAPAFF 213
TTK Y+R V+SI WL AP +
Sbjct: 689 FTTKSYVRGVSSIRSNWLNAVAPHYL 714
Score = 100 bits (250), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 47/101 (46%), Positives = 69/101 (68%)
Query: 231 EPLQRTNRISFPPGLLKQAVKKRPEIKLIVTSATLDAVKFSSYFFEAPIFTIPGRTFPVE 290
E +RT G +K+ +KKRP +++I+ SATL+A +FS +F A I I GR +PV+
Sbjct: 217 EAHERTLMTDMLLGFVKKIIKKRPALRVIIMSATLNAERFSEFFDGAEICYISGRQYPVQ 276
Query: 291 VLYTKEPETDYLDASLITVMQIHLREPPGDVLLFLTGKLDV 331
+ YT PE DYLDA L T+ Q+H + PPGD+L+FLTG+ ++
Sbjct: 277 IHYTYTPEPDYLDACLRTIFQLHTKLPPGDILVFLTGQDEI 317
Score = 80.1 bits (196), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 42/107 (39%), Positives = 64/107 (59%), Gaps = 1/107 (0%)
Query: 329 LDVRKQLLGIMDRHKLDVVSAGK-NTVRVQKAVCSGFFRNAAKKDPQEGYRTLVDSQVVY 387
LD+RKQL + ++ S+ + N+ + + SG+ N A P YRT++ +Q +
Sbjct: 608 LDIRKQLREHCLKDGWELNSSPEVNSENLLLSFLSGYITNTALLHPDGSYRTIIGNQTIS 667
Query: 388 IHPSSALFNRQPEWVIYHELVQTTKEYMREVTSIDPKWLVEFAPAFF 434
IHPSS+LF ++ E ++YHELV TTK Y+R V+SI WL AP +
Sbjct: 668 IHPSSSLFGKKVEAIMYHELVFTTKSYVRGVSSIRSNWLNAVAPHYL 714
Score = 62.8 bits (151), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 31/83 (37%), Positives = 53/83 (63%)
Query: 467 SREEIDTACEILYERMKSLGPDVPELIILPVYSALPSEMQTRIFEAAPPGSRKVVIATNI 526
++EI+ ++ K L ++P++ P++++LP E Q ++F A RKVV++TNI
Sbjct: 313 GQDEIEALEALIKSYSKQLPSNLPQIQACPLFASLPQEQQLQVFLPALANHRKVVLSTNI 372
Query: 527 AETSLTIDGIFYVVDPFDIEVRQ 549
AETS+TI GI YV+D +++Q
Sbjct: 373 AETSVTISGIRYVIDTGLAKIKQ 395
>sp|O17438|DHX15_STRPU Putative pre-mRNA-splicing factor ATP-dependent RNA helicase PRP1
(Fragment) OS=Strongylocentrotus purpuratus GN=PRP1 PE=2
SV=1
Length = 455
Score = 131 bits (329), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 59/123 (47%), Positives = 83/123 (67%)
Query: 10 SQMAEFPLEPNLSKMLIMSVHLQCSDEVLTIVSMLSVQNVFYRPKDKQALADQKKAKFNQ 69
S MAEFPL+P L+KM+I S CS+E+L++ +MLSV F RP + + LAD+ K +F
Sbjct: 328 SMMAEFPLDPQLAKMVIASTDYSCSNEILSVTAMLSVPQCFLRPNEAKKLADEAKMRFAH 387
Query: 70 MEGDHITLLAVYNSWRNNKFSNAWCYENFVQIRTLKRAQDVRKQLLGIMDRHKLDVVSAG 129
++GDH+TLL VY++++ N WCY+NF+Q R+LK A VR+QL IMDR L S
Sbjct: 388 IDGDHLTLLNVYHAFKQNNEDPQWCYDNFIQYRSLKSADSVRQQLARIMDRFALQRTSTN 447
Query: 130 KNT 132
N+
Sbjct: 448 FNS 450
Score = 110 bits (275), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 56/104 (53%), Positives = 74/104 (71%), Gaps = 1/104 (0%)
Query: 231 EPLQRTNRISFPPGLLKQAVKKRPEIKLIVTSATLDAVKFSSYFFEAPIFTIPGRTFPVE 290
E +RT GLLK+ K+R ++KL+V SATLDA KF YF AP+ T+PGRT PVE
Sbjct: 29 EAHERTVATDILMGLLKEVEKQRSDLKLVVMSATLDAGKFQHYFDNAPLMTVPGRTHPVE 88
Query: 291 VLYTKEPETDYLDASLITVMQIHL-REPPGDVLLFLTGKLDVRK 333
+ YT EPE DYL+A++ TV+QIH+ E GDVLLFLTG+ ++ +
Sbjct: 89 IFYTPEPERDYLEAAIRTVVQIHMCEEVEGDVLLFLTGQEEIEE 132
Score = 89.7 bits (221), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 43/82 (52%), Positives = 58/82 (70%), Gaps = 6/82 (7%)
Query: 467 SREEIDTACEILYERMKSLGPDVPELIILPVYSALPSEMQTRIFEAAPPG------SRKV 520
+EEI+ AC+ + + +LGP+V +L +P+YS LP MQ RIFE APP RKV
Sbjct: 126 GQEEIEEACKRIKREVDNLGPEVGDLKTIPLYSTLPPAMQQRIFEHAPPNKANGAIGRKV 185
Query: 521 VIATNIAETSLTIDGIFYVVDP 542
V++TNIAETSLTIDG+ +V+DP
Sbjct: 186 VVSTNIAETSLTIDGVVFVIDP 207
>sp|Q5XH12|DHX32_XENLA Putative pre-mRNA-splicing factor ATP-dependent RNA helicase DHX32
OS=Xenopus laevis GN=dhx32 PE=2 SV=1
Length = 748
Score = 129 bits (325), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 72/217 (33%), Positives = 115/217 (52%), Gaps = 15/217 (6%)
Query: 12 MAEFPLEPNLSKMLIMSVHLQCSDEVLTIVSMLSVQNVFYR-PKDKQALADQKKAKFNQM 70
M+EFPL+P LSK ++ + C DE+LT+ +M++ N F P + + L K KF
Sbjct: 483 MSEFPLDPQLSKSILAACEFDCVDEMLTLAAMVTAPNCFIDLPPEAKELDLIGKGKFFHP 542
Query: 71 EGDHITLLAVYNSWRNNKFSNA-------WCYENFVQIRTLKRAQDVRKQLLGIMDRHKL 123
EGDH TL+ +YN + K +NA WC + + L+ A+ +R +LL IM R +L
Sbjct: 543 EGDHFTLINIYNEYEQMKRNNASQYDVEKWCQNHCLSFVALEMARAIRNELLDIMRRIEL 602
Query: 124 DVV----SAGKNTVRVQKAVCSGFFRNAAKK-DPQEGYRTLVDSQVVYIHPSSALFN--R 176
+ + +N ++K++ SG+F A+ D Y L QV +HP S N +
Sbjct: 603 PLTGPAFGSDENVTNIKKSLLSGYFMQIARDVDGLGNYIMLTHKQVGQLHPDSGFCNSAK 662
Query: 177 QPEWVIYHELVQTTKEYMREVTSIDPKWLVEFAPAFF 213
PEWV++HE + + +R V+ I P +EF P ++
Sbjct: 663 VPEWVLFHEFSVSERSCIRIVSEISPNLFMEFVPPYY 699
Score = 64.7 bits (156), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 35/111 (31%), Positives = 58/111 (52%), Gaps = 7/111 (6%)
Query: 331 VRKQLLGIMDRHKLDVVS----AGKNTVRVQKAVCSGFFRNAAKK-DPQEGYRTLVDSQV 385
+R +LL IM R +L + + +N ++K++ SG+F A+ D Y L QV
Sbjct: 589 IRNELLDIMRRIELPLTGPAFGSDENVTNIKKSLLSGYFMQIARDVDGLGNYIMLTHKQV 648
Query: 386 VYIHPSSALFN--RQPEWVIYHELVQTTKEYMREVTSIDPKWLVEFAPAFF 434
+HP S N + PEWV++HE + + +R V+ I P +EF P ++
Sbjct: 649 GQLHPDSGFCNSAKVPEWVLFHEFSVSERSCIRIVSEISPNLFMEFVPPYY 699
Score = 43.9 bits (102), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 24/90 (26%), Positives = 46/90 (51%), Gaps = 1/90 (1%)
Query: 244 GLLKQAVKKRPEIKLIVTSATLDAVKFSSYFFEAPIFTIPGRTFPVEVLYTKEPETDYLD 303
LK RPE+K+++ + + SY+ AP+ T VE +YT DY
Sbjct: 201 SFLKVIAVSRPELKVVIITCPSLSGTLVSYYGNAPLVEAEN-THSVESVYTTSLPRDYFH 259
Query: 304 ASLITVMQIHLREPPGDVLLFLTGKLDVRK 333
++L + +IH + GD+++FL + ++++
Sbjct: 260 SALRLLFEIHHTKEKGDIVVFLACEEEIKR 289
>sp|Q7L7V1|DHX32_HUMAN Putative pre-mRNA-splicing factor ATP-dependent RNA helicase DHX32
OS=Homo sapiens GN=DHX32 PE=1 SV=1
Length = 743
Score = 124 bits (312), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 74/245 (30%), Positives = 126/245 (51%), Gaps = 18/245 (7%)
Query: 12 MAEFPLEPNLSKMLIMSVHLQCSDEVLTIVSMLSVQNVF-YRPKDKQALADQKKAKFNQM 70
M+EFPL+P LSK ++ S C DEVLTI +M++ N F + P + A F
Sbjct: 481 MSEFPLDPQLSKSILASCEFDCVDEVLTIAAMVTAPNCFSHVPHGAEEAALTCWKTFLHP 540
Query: 71 EGDHITLLAVYNSWRNNKFSNA-------WCYENFVQIRTLKRAQDVRKQLLGIMDRHKL 123
EGDH TL+++Y ++++ +++ WC + F+ L+ A +R +LL I+ R +L
Sbjct: 541 EGDHFTLISIYKAYQDTTLNSSSEYCVEKWCRDYFLNCSALRMADVIRAELLEIIKRIEL 600
Query: 124 ----DVVSAGKNTVRVQKAVCSGFFRNAAKK-DPQEGYRTLVDSQVVYIHPSS--ALFNR 176
+ +NT+ ++KA+ SG+F A+ D Y L QV +HP S ++ +
Sbjct: 601 PYAEPAFGSKENTLNIKKALLSGYFMQIARDVDGSGNYLMLTHKQVAQLHPLSGYSITKK 660
Query: 177 QPEWVIYHELVQTTKEYMREVTSIDPKWLVEFAPAFFKFSDPTKLSKFKKNQ---RLEPL 233
PEWV++H+ + Y+R + I P+ ++ P ++ + P SK Q L P+
Sbjct: 661 MPEWVLFHKFSISENNYIRITSEISPELFMQLVPQYYFSNLPPSESKDILQQVVDHLSPV 720
Query: 234 QRTNR 238
N+
Sbjct: 721 STMNK 725
Score = 60.8 bits (146), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 35/121 (28%), Positives = 63/121 (52%), Gaps = 7/121 (5%)
Query: 331 VRKQLLGIMDRHKLD----VVSAGKNTVRVQKAVCSGFFRNAAKK-DPQEGYRTLVDSQV 385
+R +LL I+ R +L + +NT+ ++KA+ SG+F A+ D Y L QV
Sbjct: 587 IRAELLEIIKRIELPYAEPAFGSKENTLNIKKALLSGYFMQIARDVDGSGNYLMLTHKQV 646
Query: 386 VYIHPSS--ALFNRQPEWVIYHELVQTTKEYMREVTSIDPKWLVEFAPAFFKFSDPTKLS 443
+HP S ++ + PEWV++H+ + Y+R + I P+ ++ P ++ + P S
Sbjct: 647 AQLHPLSGYSITKKMPEWVLFHKFSISENNYIRITSEISPELFMQLVPQYYFSNLPPSES 706
Query: 444 K 444
K
Sbjct: 707 K 707
Score = 54.7 bits (130), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 27/81 (33%), Positives = 46/81 (56%), Gaps = 1/81 (1%)
Query: 253 RPEIKLIVTSATLDAVKFSSYFFEAPIFTIPGRTFPVEVLYTKEPETDYLDASLITVMQI 312
RPE+KLI+ S+ K +SY+ P+ + + PVEV+Y E + D ++ L + +I
Sbjct: 208 RPELKLIINSSPHLISKLNSYYGNVPVIEVKNK-HPVEVVYLSEAQKDSFESILRLIFEI 266
Query: 313 HLREPPGDVLLFLTGKLDVRK 333
H GD+++FL + D+ K
Sbjct: 267 HHSGEKGDIVVFLACEQDIEK 287
>sp|Q8BZS9|DHX32_MOUSE Putative pre-mRNA-splicing factor ATP-dependent RNA helicase DHX32
OS=Mus musculus GN=Dhx32 PE=2 SV=2
Length = 744
Score = 124 bits (311), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 69/227 (30%), Positives = 121/227 (53%), Gaps = 15/227 (6%)
Query: 12 MAEFPLEPNLSKMLIMSVHLQCSDEVLTIVSMLSVQNVF-YRPKDKQALADQKKAKFNQM 70
M+EFPL+P LSK ++ S C DE+LTI +M++ + F + P + A F
Sbjct: 482 MSEFPLDPQLSKSILASCEFDCVDEMLTIAAMVTAPSCFLHVPHGAEEAAVTCWKTFLHP 541
Query: 71 EGDHITLLAVYNSWRNNKFSNA-------WCYENFVQIRTLKRAQDVRKQLLGIMDRHKL 123
EGDH TL+ VYN++++ ++A WC++ F+ L+ A +R +LL I+ R +L
Sbjct: 542 EGDHFTLINVYNAYQDTVLNSANEHCVEMWCHDCFLSCSALRMADVIRAELLEIIKRIEL 601
Query: 124 ----DVVSAGKNTVRVQKAVCSGFFRNAAKK-DPQEGYRTLVDSQVVYIHP--SSALFNR 176
+ +N + ++KA+ SG+F A+ D Y L QV +HP S ++ +
Sbjct: 602 PYAEPAFGSKENGLNIKKALLSGYFMQIARDVDGSGNYLMLTHKQVAQLHPLSSYSITKK 661
Query: 177 QPEWVIYHELVQTTKEYMREVTSIDPKWLVEFAPAFFKFSDPTKLSK 223
PEWV++H+ + Y+R +++ P+ ++ P ++ + P SK
Sbjct: 662 MPEWVLFHQFSISENNYIRVASAVSPELFMQLVPQYYFSNLPPSESK 708
Score = 59.3 bits (142), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 33/121 (27%), Positives = 63/121 (52%), Gaps = 7/121 (5%)
Query: 331 VRKQLLGIMDRHKLD----VVSAGKNTVRVQKAVCSGFFRNAAKK-DPQEGYRTLVDSQV 385
+R +LL I+ R +L + +N + ++KA+ SG+F A+ D Y L QV
Sbjct: 588 IRAELLEIIKRIELPYAEPAFGSKENGLNIKKALLSGYFMQIARDVDGSGNYLMLTHKQV 647
Query: 386 VYIHP--SSALFNRQPEWVIYHELVQTTKEYMREVTSIDPKWLVEFAPAFFKFSDPTKLS 443
+HP S ++ + PEWV++H+ + Y+R +++ P+ ++ P ++ + P S
Sbjct: 648 AQLHPLSSYSITKKMPEWVLFHQFSISENNYIRVASAVSPELFMQLVPQYYFSNLPPSES 707
Query: 444 K 444
K
Sbjct: 708 K 708
Score = 55.5 bits (132), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 28/81 (34%), Positives = 46/81 (56%), Gaps = 1/81 (1%)
Query: 253 RPEIKLIVTSATLDAVKFSSYFFEAPIFTIPGRTFPVEVLYTKEPETDYLDASLITVMQI 312
RPE+KLIV + L K SSY+ + P+ + + PVEV+Y + D ++ + + +I
Sbjct: 208 RPELKLIVNCSPLLTSKLSSYYGDVPVIEVRNK-HPVEVVYLSGAQKDSFESVIRLIFEI 266
Query: 313 HLREPPGDVLLFLTGKLDVRK 333
H GDV++FL + D+ K
Sbjct: 267 HRSGEKGDVVVFLACEQDIEK 287
>sp|P20095|PRP2_YEAST Pre-mRNA-splicing factor ATP-dependent RNA helicase-like protein
PRP2 OS=Saccharomyces cerevisiae (strain ATCC 204508 /
S288c) GN=PRP2 PE=1 SV=1
Length = 876
Score = 119 bits (299), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 77/229 (33%), Positives = 126/229 (55%), Gaps = 32/229 (13%)
Query: 12 MAEFPLEPNLSKML-IMSVHLQCS---DEVLTIVSMLSVQNVFYRPKDKQALADQKKAKF 67
M EFP EP +K+L + H QC +E LTIVSML + + + A A +
Sbjct: 642 MCEFPCEPEFAKVLYTAATHEQCQGVLEECLTIVSMLHETPSLFIGQKRDAAA----SVL 697
Query: 68 NQMEGDHITLLAVYNSWRNNKFSNAWCYENFVQIRTLKRAQDVRKQL------LGIM--- 118
+++E DHI L ++N WRN+KFS +WC ++ +Q +T+ R +++R QL +G++
Sbjct: 698 SEVESDHILYLEIFNQWRNSKFSRSWCQDHKIQFKTMLRVRNIRNQLFRCSEKVGLVEKN 757
Query: 119 DRHKLDVVS-AGKNTVRVQKAVCSGFFRNAAKKDPQEGYRTLVDSQV---VYIHPSSALF 174
D+ ++ + + AG R+ + SGF N + P GY+T+ S V +HP+S LF
Sbjct: 758 DQARMKIGNIAGYINARITRCFISGFPMNIVQLGPT-GYQTMGRSSGGLNVSVHPTSILF 816
Query: 175 -------NRQPEWVIYHELVQTTKEYMREVTSIDPK--WLVEFAPAFFK 214
R ++V+Y +L+ T+KE++R+ I PK WL++ P FK
Sbjct: 817 VNHKEKAQRPSKYVLYQQLMLTSKEFIRDCLVI-PKEEWLIDMVPQIFK 864
Score = 103 bits (257), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 50/121 (41%), Positives = 80/121 (66%), Gaps = 1/121 (0%)
Query: 214 KFSDPTKLSKFKKNQRLEPLQRTNRISFPPGLLKQAVKKRPEIKLIVTSATLDAVKFSSY 273
+F +KLSK+ E +RT GLLK + +RP +KL+++SAT++A KFS +
Sbjct: 330 EFLTDSKLSKYSCIMIDEAHERTLATDILIGLLKDILPQRPTLKLLISSATMNAKKFSEF 389
Query: 274 FFEAPIFTIPGRTFPVEVLYTKEPETDYLDASLITVMQIHLREP-PGDVLLFLTGKLDVR 332
F PIF +PGR +PV++ YT +PE +Y+ A++ T+ QIH + PGD+L+FLTG+ ++
Sbjct: 390 FDNCPIFNVPGRRYPVDIHYTLQPEANYIHAAITTIFQIHTTQSLPGDILVFLTGQEEIE 449
Query: 333 K 333
+
Sbjct: 450 R 450
Score = 84.0 bits (206), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 41/76 (53%), Positives = 51/76 (67%)
Query: 467 SREEIDTACEILYERMKSLGPDVPELIILPVYSALPSEMQTRIFEAAPPGSRKVVIATNI 526
+EEI+ L E M LG ++II P+Y+ LP E Q +IF+ P RKVV+ATNI
Sbjct: 444 GQEEIERTKTKLEEIMSKLGSRTKQMIITPIYANLPQEQQLKIFQPTPENCRKVVLATNI 503
Query: 527 AETSLTIDGIFYVVDP 542
AETSLTIDGI YV+DP
Sbjct: 504 AETSLTIDGIRYVIDP 519
Score = 51.2 bits (121), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 34/99 (34%), Positives = 52/99 (52%), Gaps = 14/99 (14%)
Query: 349 AGKNTVRVQKAVCSGFFRNAAKKDPQEGYRTLVDSQV---VYIHPSSALF-------NRQ 398
AG R+ + SGF N + P GY+T+ S V +HP+S LF R
Sbjct: 768 AGYINARITRCFISGFPMNIVQLGPT-GYQTMGRSSGGLNVSVHPTSILFVNHKEKAQRP 826
Query: 399 PEWVIYHELVQTTKEYMREVTSIDPK--WLVEFAPAFFK 435
++V+Y +L+ T+KE++R+ I PK WL++ P FK
Sbjct: 827 SKYVLYQQLMLTSKEFIRDCLVI-PKEEWLIDMVPQIFK 864
>sp|Q924H9|DQX1_MOUSE ATP-dependent RNA helicase DQX1 OS=Mus musculus GN=Dqx1 PE=2 SV=1
Length = 718
Score = 115 bits (287), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 70/227 (30%), Positives = 113/227 (49%), Gaps = 11/227 (4%)
Query: 12 MAEFPLEPNLSKMLIMSVHLQCSDEVLTIVSMLSVQNVFYRPKDKQALADQKKAKFNQME 71
++EFPL P L+K L+ S C DE+LT+ +ML+ F RP A ++A +
Sbjct: 465 LSEFPLPPELAKALLASCEFNCVDEMLTLAAMLTAAPGFTRPPLSAGEAALRRA-LEHAD 523
Query: 72 GDHITLLAVYNSWRNNKFSNAWCYENFVQIRTLKRAQDVRKQLLGIMDRHKLDV----VS 127
GDH +L+ VY ++ + AWC + +L +A+ +R +L+ +M R +L +
Sbjct: 524 GDHSSLIQVYEAFVQSGADEAWCQARGLNWESLCQARKLRAELVELMQRIELPLSQPAFG 583
Query: 128 AGKNTVRVQKAVCSGFFRNAAKK-DPQEGYRTLVDSQVVYIHPSSALFNRQ-----PEWV 181
+ +N +QKA+ SG+F A+ D Y L V + P + NR+ P WV
Sbjct: 584 SEQNRRDLQKALLSGYFLKVARDTDGTGNYLLLTHKHVAQLSPYCSYRNRRTPAQPPTWV 643
Query: 182 IYHELVQTTKEYMREVTSIDPKWLVEFAPAFFKFSDPTKLSKFKKNQ 228
+YH + + V+ I P+ LVE AP +F + P S+ NQ
Sbjct: 644 LYHSFSISKDNCLCIVSEIQPEMLVELAPPYFLSNLPPSESRDLLNQ 690
Score = 53.9 bits (128), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 38/129 (29%), Positives = 61/129 (47%), Gaps = 10/129 (7%)
Query: 331 VRKQLLGIMDRHKLDV----VSAGKNTVRVQKAVCSGFFRNAAKK-DPQEGYRTLVDSQV 385
+R +L+ +M R +L + + +N +QKA+ SG+F A+ D Y L V
Sbjct: 562 LRAELVELMQRIELPLSQPAFGSEQNRRDLQKALLSGYFLKVARDTDGTGNYLLLTHKHV 621
Query: 386 VYIHPSSALFNRQ-----PEWVIYHELVQTTKEYMREVTSIDPKWLVEFAPAFFKFSDPT 440
+ P + NR+ P WV+YH + + V+ I P+ LVE AP +F + P
Sbjct: 622 AQLSPYCSYRNRRTPAQPPTWVLYHSFSISKDNCLCIVSEIQPEMLVELAPPYFLSNLPP 681
Query: 441 KLSKFKKNQ 449
S+ NQ
Sbjct: 682 SESRDLLNQ 690
Score = 38.9 bits (89), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 32/111 (28%), Positives = 52/111 (46%), Gaps = 5/111 (4%)
Query: 434 FKFSDPTKLSKFKKNQRLEPLYNKYEEPN---AWRISREEIDTACEILYERMKSLGPDVP 490
+K + PT L + LE L + E P + S EEI CE L M +L P
Sbjct: 233 YKDTVPTDLVEAACQAVLE-LCQQEEAPGDVLVYLPSEEEISLCCESLSGEMGTLAVPGP 291
Query: 491 ELIILPVYSALPSEMQTRIFEAAPPGSRKVVIATNIAETSLTIDGIFYVVD 541
+LP++ +QT ++E RK+V+ +A+ S ++ I +V+D
Sbjct: 292 PPRVLPLHPGCAQAIQT-VYEDTDVSVRKIVVTHWLADFSFSLPSIQHVID 341
>sp|Q3ZBE0|DQX1_BOVIN ATP-dependent RNA helicase DQX1 OS=Bos taurus GN=DQX1 PE=2 SV=1
Length = 719
Score = 113 bits (282), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 73/236 (30%), Positives = 118/236 (50%), Gaps = 13/236 (5%)
Query: 12 MAEFPLEPNLSKMLIMSVHLQCSDEVLTIVSMLSVQNVFYRPKDKQALADQKKAKFNQME 71
++EFPL P L+K L+ S C DE+LT+ +ML+ F RP A ++A ++
Sbjct: 467 LSEFPLAPELAKALLASCEFDCVDEMLTLAAMLTAAPGFTRPPVCAEEAALRRA-LEHVD 525
Query: 72 GDHITLLAVYNSWRNNKFSNAWCYENFVQIRTLKRAQDVRKQLLGIMDRHKLDV----VS 127
GDH +L+ VY ++ + AWC + L +A+ +R +LL +M R +L +
Sbjct: 526 GDHSSLIQVYEAFIQSGADKAWCQARGLNWAALCQARKLRGELLELMQRIELPLSQPAFG 585
Query: 128 AGKNTVRVQKAVCSGFFRNAAKK-DPQEGYRTLVDSQVVYIHPSSALFNRQ-----PEWV 181
+ +N +QKA+ SG+F A+ D Y L V + P+ +R+ P WV
Sbjct: 586 SERNRRDLQKALVSGYFLKVARDTDGTGNYLLLTHKHVAQLSPNCCYRSRRAPARPPLWV 645
Query: 182 IYHELVQTTKEYMREVTSIDPKWLVEFAPAFFKFSDPTKLSKFKKNQRLEPLQRTN 237
+YH + + V+ I P+ LVE AP +F + P S+ NQ E +RT+
Sbjct: 646 LYHSFSISKDNCLSIVSEIQPQMLVELAPPYFLSNLPPSESRDFLNQLRE--ERTD 699
Score = 54.3 bits (129), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 57/219 (26%), Positives = 90/219 (41%), Gaps = 23/219 (10%)
Query: 254 PEI-KLIVTSATLDAVK----FSSYFFEAPIFTIPGRTFPVEVLYTKEPETDYLDASLIT 308
PE+ K ++ S D V ++ AP FT P L D +SLI
Sbjct: 474 PELAKALLASCEFDCVDEMLTLAAMLTAAPGFTRPPVCAEEAALRRALEHVDGDHSSLIQ 533
Query: 309 VMQIHLR--------EPPGDVLLFLTGKLDVRKQLLGIMDRHKLDV----VSAGKNTVRV 356
V + ++ + G L +R +LL +M R +L + + +N +
Sbjct: 534 VYEAFIQSGADKAWCQARGLNWAALCQARKLRGELLELMQRIELPLSQPAFGSERNRRDL 593
Query: 357 QKAVCSGFFRNAAKK-DPQEGYRTLVDSQVVYIHPSSALFNRQ-----PEWVIYHELVQT 410
QKA+ SG+F A+ D Y L V + P+ +R+ P WV+YH +
Sbjct: 594 QKALVSGYFLKVARDTDGTGNYLLLTHKHVAQLSPNCCYRSRRAPARPPLWVLYHSFSIS 653
Query: 411 TKEYMREVTSIDPKWLVEFAPAFFKFSDPTKLSKFKKNQ 449
+ V+ I P+ LVE AP +F + P S+ NQ
Sbjct: 654 KDNCLSIVSEIQPQMLVELAPPYFLSNLPPSESRDFLNQ 692
Score = 42.4 bits (98), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 24/75 (32%), Positives = 41/75 (54%), Gaps = 1/75 (1%)
Query: 467 SREEIDTACEILYERMKSLGPDVPELIILPVYSALPSEMQTRIFEAAPPGSRKVVIATNI 526
S EEI CE L +++SL P +LP++ +Q ++E G+RKVV+ +
Sbjct: 270 SEEEISLCCESLSRKVRSLENQGPPPRVLPLHPGCGQAVQA-VYEDTESGARKVVVTHWL 328
Query: 527 AETSLTIDGIFYVVD 541
A+ S ++ I +V+D
Sbjct: 329 ADFSFSLPSIRHVID 343
>sp|Q8IX18|DHX40_HUMAN Probable ATP-dependent RNA helicase DHX40 OS=Homo sapiens GN=DHX40
PE=1 SV=2
Length = 779
Score = 112 bits (281), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 77/259 (29%), Positives = 135/259 (52%), Gaps = 19/259 (7%)
Query: 12 MAEFPLEPNLSKMLIMSVHLQCSDEVLTIVSMLSVQNVFYRPKDK--QALADQKKAKFNQ 69
M EFPL P+L+ +I + L C D +L I +MLSV+NVF RP D Q A+Q+ +
Sbjct: 486 MVEFPLPPHLTCAVIKAASLDCEDLLLPIAAMLSVENVFIRPVDPEYQKEAEQRHRELAA 545
Query: 70 MEG---DHITLLAVYNSWRNNKFSNAWCYENFVQIRTLKRAQDVRKQLLGIMDRHKL--- 123
G D TL ++ +++ +WC ++++ R L A V QL ++ + K
Sbjct: 546 KAGGFNDFATLAVIFEQCKSSGAPASWCQKHWIHWRCLFSAFRVEAQLRELIRKLKQQSD 605
Query: 124 ---DVVSAGKNTVRVQKAVCSGFFRNAAKKDPQEGYRTLVD-SQVVYIHPSSALFNRQP- 178
+ K+ V +++ +C+G+F+N A++ + T+ V+IHPSSAL ++
Sbjct: 606 FPKETFEGPKHEV-LRRCLCAGYFKNVARRSVGRTFCTMDGRGSPVHIHPSSALHEQETK 664
Query: 179 -EWVIYHELVQTTKEYMREVTSIDPKWLVEFAPAFFKFS--DPTKLSK--FKKNQRLEPL 233
EW+I+HE++ TTK Y R V I +W+ + P +F+ D + +++ +++ R
Sbjct: 665 LEWIIFHEVLVTTKVYARIVCPIRYEWVRDLLPKLHEFNAHDLSSVARREVREDARRRWT 724
Query: 234 QRTNRISFPPGLLKQAVKK 252
+ N G+ K +KK
Sbjct: 725 NKENVKQLKDGISKDVLKK 743
Score = 75.1 bits (183), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 38/79 (48%), Positives = 53/79 (67%), Gaps = 7/79 (8%)
Query: 470 EIDTACEILYERMKSLGPD-------VPELIILPVYSALPSEMQTRIFEAAPPGSRKVVI 522
EI+ +CE+L++ +S+ D + L+ILP Y ++ ++ Q RIF PPG RK VI
Sbjct: 284 EIEKSCELLFQMAESVDYDYDVQDTTLDGLLILPCYGSMTTDQQRRIFLPPPPGIRKCVI 343
Query: 523 ATNIAETSLTIDGIFYVVD 541
+TNI+ TSLTIDGI YVVD
Sbjct: 344 STNISATSLTIDGIRYVVD 362
Score = 72.4 bits (176), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 45/130 (34%), Positives = 67/130 (51%), Gaps = 12/130 (9%)
Query: 215 FSDPTKLSKFKKNQRLEPLQRTNRISFPPGLLKQAVK-----KRPEIKLIVTSATLDAVK 269
DP L+KF E +RT GLLK+ + ++ +K++V SAT++ K
Sbjct: 159 LGDPN-LTKFSVIILDEAHERTLTTDILFGLLKKLFQEKSPNRKEHLKVVVMSATMELAK 217
Query: 270 FSSYFFEAPIFTIPGRTFPVEVLYTK------EPETDYLDASLITVMQIHLREPPGDVLL 323
S++F PIF IPGR +PV + T Y+ A + M IHL E GD+L+
Sbjct: 218 LSAFFGNCPIFDIPGRLYPVREKFCNLIGPRDRENTAYIQAIVKVTMDIHLNEMAGDILV 277
Query: 324 FLTGKLDVRK 333
FLTG+ ++ K
Sbjct: 278 FLTGQFEIEK 287
Score = 61.6 bits (148), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 29/85 (34%), Positives = 52/85 (61%), Gaps = 3/85 (3%)
Query: 356 VQKAVCSGFFRNAAKKDPQEGYRTLVD-SQVVYIHPSSALFNRQP--EWVIYHELVQTTK 412
+++ +C+G+F+N A++ + T+ V+IHPSSAL ++ EW+I+HE++ TTK
Sbjct: 619 LRRCLCAGYFKNVARRSVGRTFCTMDGRGSPVHIHPSSALHEQETKLEWIIFHEVLVTTK 678
Query: 413 EYMREVTSIDPKWLVEFAPAFFKFS 437
Y R V I +W+ + P +F+
Sbjct: 679 VYARIVCPIRYEWVRDLLPKLHEFN 703
>sp|Q5XI69|DHX40_RAT Probable ATP-dependent RNA helicase DHX40 OS=Rattus norvegicus
GN=Dhx40 PE=2 SV=1
Length = 779
Score = 112 bits (280), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 77/259 (29%), Positives = 135/259 (52%), Gaps = 19/259 (7%)
Query: 12 MAEFPLEPNLSKMLIMSVHLQCSDEVLTIVSMLSVQNVFYRPKDK--QALADQKKAKFNQ 69
M EFPL P+L+ +I + L C D +L I +MLSV+NVF RP D Q A+QK +
Sbjct: 486 MVEFPLPPHLTCAVIRAASLDCEDLLLPIAAMLSVENVFIRPVDPEYQKEAEQKHRELAA 545
Query: 70 MEG---DHITLLAVYNSWRNNKFSNAWCYENFVQIRTLKRAQDVRKQLLGIMDRHK---- 122
G D TL ++ +++ +WC ++++ R L A V QL ++ + K
Sbjct: 546 KAGGFNDFATLAVIFEQCKSSGAPASWCQKHWIHWRCLFSAFRVEAQLRELIRKLKQQSD 605
Query: 123 --LDVVSAGKNTVRVQKAVCSGFFRNAAKKDPQEGYRTLVD-SQVVYIHPSSALFNRQP- 178
+ K+ V +++ +C+G+F+N A++ + T+ V+IHPSSAL ++
Sbjct: 606 FPRETFEGPKHEV-LRRCLCAGYFKNVARRSVGRTFCTMDGRGSPVHIHPSSALHEQETK 664
Query: 179 -EWVIYHELVQTTKEYMREVTSIDPKWLVEFAPAFFKFS--DPTKLSK--FKKNQRLEPL 233
EW+I+HE++ TTK Y R V I +W+ + P + + D + +++ + + R +
Sbjct: 665 LEWIIFHEVLVTTKVYARIVCPIRYEWVRDLLPKLHELNAHDLSSVARREMRDDARRKWT 724
Query: 234 QRTNRISFPPGLLKQAVKK 252
+ N G+ K+ +KK
Sbjct: 725 NKENVKQLKDGISKEVLKK 743
Score = 75.1 bits (183), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 38/79 (48%), Positives = 53/79 (67%), Gaps = 7/79 (8%)
Query: 470 EIDTACEILYERMKSLGPD-------VPELIILPVYSALPSEMQTRIFEAAPPGSRKVVI 522
EI+ +CE+L++ +S+ D + L+ILP Y ++ ++ Q RIF PPG RK VI
Sbjct: 284 EIEKSCELLFQMAESVDYDYDVQDTTLDGLLILPCYGSMTTDQQRRIFLPPPPGIRKCVI 343
Query: 523 ATNIAETSLTIDGIFYVVD 541
+TNI+ TSLTIDGI YVVD
Sbjct: 344 STNISATSLTIDGIRYVVD 362
Score = 72.0 bits (175), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 45/130 (34%), Positives = 67/130 (51%), Gaps = 12/130 (9%)
Query: 215 FSDPTKLSKFKKNQRLEPLQRTNRISFPPGLLKQAVK-----KRPEIKLIVTSATLDAVK 269
DP L+KF E +RT GLLK+ + ++ +K++V SAT++ K
Sbjct: 159 LGDPN-LNKFSVIILDEAHERTLTTDILFGLLKKLFQDKSPNRKEHLKVVVMSATMELAK 217
Query: 270 FSSYFFEAPIFTIPGRTFPVEVLYTK------EPETDYLDASLITVMQIHLREPPGDVLL 323
S++F PIF IPGR +PV + T Y+ A + M IHL E GD+L+
Sbjct: 218 LSAFFGNCPIFDIPGRLYPVREKFCNLIGPRDRENTAYIQAIVKVTMDIHLNEMAGDILV 277
Query: 324 FLTGKLDVRK 333
FLTG+ ++ K
Sbjct: 278 FLTGQFEIEK 287
Score = 59.3 bits (142), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 28/85 (32%), Positives = 51/85 (60%), Gaps = 3/85 (3%)
Query: 356 VQKAVCSGFFRNAAKKDPQEGYRTLVD-SQVVYIHPSSALFNRQP--EWVIYHELVQTTK 412
+++ +C+G+F+N A++ + T+ V+IHPSSAL ++ EW+I+HE++ TTK
Sbjct: 619 LRRCLCAGYFKNVARRSVGRTFCTMDGRGSPVHIHPSSALHEQETKLEWIIFHEVLVTTK 678
Query: 413 EYMREVTSIDPKWLVEFAPAFFKFS 437
Y R V I +W+ + P + +
Sbjct: 679 VYARIVCPIRYEWVRDLLPKLHELN 703
>sp|Q6PE54|DHX40_MOUSE Probable ATP-dependent RNA helicase DHX40 OS=Mus musculus GN=Dhx40
PE=2 SV=1
Length = 779
Score = 112 bits (280), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 76/259 (29%), Positives = 136/259 (52%), Gaps = 19/259 (7%)
Query: 12 MAEFPLEPNLSKMLIMSVHLQCSDEVLTIVSMLSVQNVFYRPKDK--QALADQKKAKFNQ 69
M EFPL P+L+ +I + L C D +L I +MLSV+NVF RP D Q A+Q+ +
Sbjct: 486 MVEFPLPPHLTCAVIRAASLDCEDLLLPIAAMLSVENVFIRPVDPEYQKEAEQRHRELAA 545
Query: 70 MEG---DHITLLAVYNSWRNNKFSNAWCYENFVQIRTLKRAQDVRKQLLGIMDRHK---- 122
G D TL ++ +++ +WC ++++ R L A V QL ++ + K
Sbjct: 546 KAGGFNDFATLAVIFEQCKSSGAPASWCQKHWIHWRCLFSAFRVEAQLRELIRKLKQQSD 605
Query: 123 --LDVVSAGKNTVRVQKAVCSGFFRNAAKKDPQEGYRTLVD-SQVVYIHPSSALFNRQP- 178
+ K+ V +++ +C+G+F+N A++ + T+ V+IHPSSAL ++
Sbjct: 606 FPRETFEGPKHEV-LRRCLCAGYFKNVARRSVGRTFCTMDGRGSPVHIHPSSALHEQETK 664
Query: 179 -EWVIYHELVQTTKEYMREVTSIDPKWLVEFAPAFFKFS--DPTKLSK--FKKNQRLEPL 233
EW+I+HE++ TTK Y R V I +W+ + P + + D + +++ +++ R +
Sbjct: 665 LEWIIFHEVLVTTKVYARIVCPIRYEWVRDLLPKLHELNAHDLSSVARREMREDARRKWT 724
Query: 234 QRTNRISFPPGLLKQAVKK 252
+ N G+ K+ +KK
Sbjct: 725 NKENVKQLKDGISKEVLKK 743
Score = 75.1 bits (183), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 38/79 (48%), Positives = 53/79 (67%), Gaps = 7/79 (8%)
Query: 470 EIDTACEILYERMKSLGPD-------VPELIILPVYSALPSEMQTRIFEAAPPGSRKVVI 522
EI+ +CE+L++ +S+ D + L+ILP Y ++ ++ Q RIF PPG RK VI
Sbjct: 284 EIEKSCELLFQMAESVDYDYDVQDTTLDGLLILPCYGSMTTDQQRRIFLPPPPGIRKCVI 343
Query: 523 ATNIAETSLTIDGIFYVVD 541
+TNI+ TSLTIDGI YVVD
Sbjct: 344 STNISATSLTIDGIRYVVD 362
Score = 73.2 bits (178), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 46/130 (35%), Positives = 67/130 (51%), Gaps = 12/130 (9%)
Query: 215 FSDPTKLSKFKKNQRLEPLQRTNRISFPPGLLKQAVK-----KRPEIKLIVTSATLDAVK 269
DP LSKF E +RT GLLK+ + ++ +K++V SAT++ K
Sbjct: 159 LGDPN-LSKFSVIILDEAHERTLTTDILFGLLKKLFQDKSPNRKEHLKVVVMSATMELAK 217
Query: 270 FSSYFFEAPIFTIPGRTFPVEVLYTK------EPETDYLDASLITVMQIHLREPPGDVLL 323
S++F PIF IPGR +PV + T Y+ A + M IHL E GD+L+
Sbjct: 218 LSAFFGNCPIFDIPGRLYPVREKFCNLIGPRDRENTAYIQAIVKVTMDIHLNEMAGDILV 277
Query: 324 FLTGKLDVRK 333
FLTG+ ++ K
Sbjct: 278 FLTGQFEIEK 287
Score = 59.3 bits (142), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 28/85 (32%), Positives = 51/85 (60%), Gaps = 3/85 (3%)
Query: 356 VQKAVCSGFFRNAAKKDPQEGYRTLVD-SQVVYIHPSSALFNRQP--EWVIYHELVQTTK 412
+++ +C+G+F+N A++ + T+ V+IHPSSAL ++ EW+I+HE++ TTK
Sbjct: 619 LRRCLCAGYFKNVARRSVGRTFCTMDGRGSPVHIHPSSALHEQETKLEWIIFHEVLVTTK 678
Query: 413 EYMREVTSIDPKWLVEFAPAFFKFS 437
Y R V I +W+ + P + +
Sbjct: 679 VYARIVCPIRYEWVRDLLPKLHELN 703
>sp|Q5R864|DHX40_PONAB Probable ATP-dependent RNA helicase DHX40 OS=Pongo abelii GN=DHX40
PE=2 SV=1
Length = 779
Score = 112 bits (279), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 76/259 (29%), Positives = 135/259 (52%), Gaps = 19/259 (7%)
Query: 12 MAEFPLEPNLSKMLIMSVHLQCSDEVLTIVSMLSVQNVFYRPKDK--QALADQKKAKFNQ 69
M EFPL P+L+ +I + L C D +L I +MLSV+NVF RP D Q A+Q+ +
Sbjct: 486 MVEFPLPPHLTCAVIKAASLDCEDLLLPIAAMLSVENVFIRPVDPEYQKEAEQRHRELAA 545
Query: 70 MEG---DHITLLAVYNSWRNNKFSNAWCYENFVQIRTLKRAQDVRKQLLGIMDRHK---- 122
G D TL ++ +++ +WC ++++ R L A V QL ++ + K
Sbjct: 546 KAGGFNDFATLAVIFEQCKSSGAPASWCQKHWIHWRCLFSAFRVEAQLRELIRKLKQQSD 605
Query: 123 --LDVVSAGKNTVRVQKAVCSGFFRNAAKKDPQEGYRTLVD-SQVVYIHPSSALFNRQP- 178
+ K+ V +++ +C+G+F+N A++ + T+ V+IHPSSAL ++
Sbjct: 606 FPRETFEGPKHEV-LRRCLCAGYFKNVARRSVGRTFCTMDGRGSPVHIHPSSALHEQETK 664
Query: 179 -EWVIYHELVQTTKEYMREVTSIDPKWLVEFAPAFFKFS--DPTKLSK--FKKNQRLEPL 233
EW+++HE++ TTK Y R V I +W+ + P +F+ D + +++ +++ R
Sbjct: 665 LEWIVFHEVLVTTKVYARIVCPIRYEWVRDLLPKLHEFNAHDLSSVARREVREDARRRWT 724
Query: 234 QRTNRISFPPGLLKQAVKK 252
+ N G+ K +KK
Sbjct: 725 NKENVKQLKDGISKDVLKK 743
Score = 75.1 bits (183), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 38/79 (48%), Positives = 53/79 (67%), Gaps = 7/79 (8%)
Query: 470 EIDTACEILYERMKSLGPD-------VPELIILPVYSALPSEMQTRIFEAAPPGSRKVVI 522
EI+ +CE+L++ +S+ D + L+ILP Y ++ ++ Q RIF PPG RK VI
Sbjct: 284 EIEKSCELLFQMAESVDYDYDVQDTTLDGLLILPCYGSMTTDQQRRIFLPPPPGIRKCVI 343
Query: 523 ATNIAETSLTIDGIFYVVD 541
+TNI+ TSLTIDGI YVVD
Sbjct: 344 STNISATSLTIDGIRYVVD 362
Score = 72.4 bits (176), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 45/130 (34%), Positives = 67/130 (51%), Gaps = 12/130 (9%)
Query: 215 FSDPTKLSKFKKNQRLEPLQRTNRISFPPGLLKQAVK-----KRPEIKLIVTSATLDAVK 269
DP L+KF E +RT GLLK+ + ++ +K++V SAT++ K
Sbjct: 159 LGDPN-LTKFSVIILDEAHERTLTTDILFGLLKKLFQEKSPNRKEHLKVVVMSATMELAK 217
Query: 270 FSSYFFEAPIFTIPGRTFPVEVLYTK------EPETDYLDASLITVMQIHLREPPGDVLL 323
S++F PIF IPGR +PV + T Y+ A + M IHL E GD+L+
Sbjct: 218 LSAFFGNCPIFDIPGRLYPVREKFCNLIGPRDRENTAYIQAIVKVTMDIHLNEMAGDILV 277
Query: 324 FLTGKLDVRK 333
FLTG+ ++ K
Sbjct: 278 FLTGQFEIEK 287
Score = 60.8 bits (146), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 28/85 (32%), Positives = 52/85 (61%), Gaps = 3/85 (3%)
Query: 356 VQKAVCSGFFRNAAKKDPQEGYRTLVD-SQVVYIHPSSALFNRQP--EWVIYHELVQTTK 412
+++ +C+G+F+N A++ + T+ V+IHPSSAL ++ EW+++HE++ TTK
Sbjct: 619 LRRCLCAGYFKNVARRSVGRTFCTMDGRGSPVHIHPSSALHEQETKLEWIVFHEVLVTTK 678
Query: 413 EYMREVTSIDPKWLVEFAPAFFKFS 437
Y R V I +W+ + P +F+
Sbjct: 679 VYARIVCPIRYEWVRDLLPKLHEFN 703
>sp|Q8TE96|DQX1_HUMAN ATP-dependent RNA helicase DQX1 OS=Homo sapiens GN=DQX1 PE=2 SV=2
Length = 717
Score = 110 bits (275), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 69/227 (30%), Positives = 109/227 (48%), Gaps = 11/227 (4%)
Query: 12 MAEFPLEPNLSKMLIMSVHLQCSDEVLTIVSMLSVQNVFYRPKDKQALADQKKAKFNQME 71
++EFPL P L+K L+ S C DE+LT+ +ML+ F RP A ++A +
Sbjct: 465 LSEFPLAPELAKALLASCEFDCVDEMLTLAAMLTAAPGFTRPPLSAEEAALRRA-LEHTD 523
Query: 72 GDHITLLAVYNSWRNNKFSNAWCYENFVQIRTLKRAQDVRKQLLGIMDRHKLDV----VS 127
GDH +L+ VY ++ + AWC + L +A +R +LL +M R +L +
Sbjct: 524 GDHSSLIQVYEAFIQSGADEAWCQARGLNWAALCQAHKLRGELLELMQRIELPLSLPAFG 583
Query: 128 AGKNTVRVQKAVCSGFFRNAAKKDPQEGYRTLVDSQVVYIHPSSALFN------RQPEWV 181
+ +N +QKA+ SG+F A+ G L+ + V S + R P WV
Sbjct: 584 SEQNRRDLQKALVSGYFLKVARDTDGTGNYLLLTHKHVAQLSSYCCYRSRRAPARPPPWV 643
Query: 182 IYHELVQTTKEYMREVTSIDPKWLVEFAPAFFKFSDPTKLSKFKKNQ 228
+YH + + V+ I P+ LVE AP +F + P S+ NQ
Sbjct: 644 LYHNFTISKDNCLSIVSEIQPQMLVELAPPYFLSNLPPSESRDLLNQ 690
Score = 54.3 bits (129), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 56/219 (25%), Positives = 89/219 (40%), Gaps = 23/219 (10%)
Query: 254 PEI-KLIVTSATLDAVK----FSSYFFEAPIFTIPGRTFPVEVLYTKEPETDYLDASLIT 308
PE+ K ++ S D V ++ AP FT P + L TD +SLI
Sbjct: 472 PELAKALLASCEFDCVDEMLTLAAMLTAAPGFTRPPLSAEEAALRRALEHTDGDHSSLIQ 531
Query: 309 VMQIHLREPPGDVLLFLTG--------KLDVRKQLLGIMDRHKLDV----VSAGKNTVRV 356
V + ++ + G +R +LL +M R +L + + +N +
Sbjct: 532 VYEAFIQSGADEAWCQARGLNWAALCQAHKLRGELLELMQRIELPLSLPAFGSEQNRRDL 591
Query: 357 QKAVCSGFFRNAAKKDPQEGYRTLVDSQVVYIHPSSALFN------RQPEWVIYHELVQT 410
QKA+ SG+F A+ G L+ + V S + R P WV+YH +
Sbjct: 592 QKALVSGYFLKVARDTDGTGNYLLLTHKHVAQLSSYCCYRSRRAPARPPPWVLYHNFTIS 651
Query: 411 TKEYMREVTSIDPKWLVEFAPAFFKFSDPTKLSKFKKNQ 449
+ V+ I P+ LVE AP +F + P S+ NQ
Sbjct: 652 KDNCLSIVSEIQPQMLVELAPPYFLSNLPPSESRDLLNQ 690
>sp|P45018|HRPA_HAEIN ATP-dependent RNA helicase HrpA homolog OS=Haemophilus influenzae
(strain ATCC 51907 / DSM 11121 / KW20 / Rd) GN=hrpA PE=3
SV=2
Length = 1304
Score = 105 bits (261), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 64/216 (29%), Positives = 111/216 (51%), Gaps = 14/216 (6%)
Query: 11 QMAEFPLEPNLSKMLIMSVHLQCSDEVLTIVSMLSVQNVFYRPKDKQALADQKKAKFNQM 70
Q+A+ P++P L+KM++ +V+ C E++ IVS LS+Q+ RP++KQ +D+K +F
Sbjct: 498 QLAQLPVDPRLAKMILSAVNFGCVYEMMIIVSALSIQDPRERPQEKQQASDEKHRRFADK 557
Query: 71 EGDHITLLAVYNSWR----------NNKFSNAWCYENFVQIRTLKRAQDVRKQLLGIMDR 120
+ D LA N WR N+F C ++F+ ++ QD+ Q+ +
Sbjct: 558 KSD---FLAFLNLWRYLQEQQKESSKNQFRRQ-CQKDFLNYLRIREWQDIYHQIRLTVRE 613
Query: 121 HKLDVVSAGKNTVRVQKAVCSGFFRNAAKKDPQEGYRTLVDSQVVYIHPSSALFNRQPEW 180
L + S ++ A+ SG + K+ ++ + I P+S LF +QP+W
Sbjct: 614 MSLPINSEKAEYQQIHTALLSGLLSHIGLKEAEKQQYLGARNAHFAIFPNSVLFKKQPKW 673
Query: 181 VIYHELVQTTKEYMREVTSIDPKWLVEFAPAFFKFS 216
V+ ELV+T+K + R V I+P+W+ A K S
Sbjct: 674 VMAAELVETSKLWGRMVAEIEPEWIEPLAEHLIKKS 709
Score = 74.3 bits (181), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 42/106 (39%), Positives = 65/106 (61%), Gaps = 5/106 (4%)
Query: 231 EPLQRTNRISFPPGLLKQAV-KKRPEIKLIVTSATLDAVKFSSYFFEAPIFTIPGRTFPV 289
E +R+ F G LKQ + ++R ++KLI+TSAT+D +FS +F API + GRT+PV
Sbjct: 204 EAHERSLNNDFILGYLKQLLPRRRRDLKLIITSATIDVERFSKHFNNAPIIEVSGRTYPV 263
Query: 290 EVLY---TKEPETDYLDASLITVMQIHLREPPGDVLLFLTGKLDVR 332
EV Y +E + D L L V ++ E GD+L+F+ G+ ++R
Sbjct: 264 EVRYRPVVEEDDQDQLQGILNAVDELQA-EGRGDILIFMNGEREIR 308
Score = 53.1 bits (126), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 25/59 (42%), Positives = 39/59 (66%), Gaps = 2/59 (3%)
Query: 494 ILPVYSALPSEMQTRIFEAAPPGSRKVVIATNIAETSLTIDGIFYVVDPFDIEVRQAKY 552
ILP+++ L ++ Q +IF P G ++V+ATN+AETSLT+ I YV+DP + + Y
Sbjct: 324 ILPLFARLSAQEQNKIFH--PSGLNRIVLATNVAETSLTVPSIKYVIDPGTARISRYSY 380
Score = 50.8 bits (120), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 26/83 (31%), Positives = 44/83 (53%)
Query: 355 RVQKAVCSGFFRNAAKKDPQEGYRTLVDSQVVYIHPSSALFNRQPEWVIYHELVQTTKEY 414
++ A+ SG + K+ ++ + I P+S LF +QP+WV+ ELV+T+K +
Sbjct: 627 QIHTALLSGLLSHIGLKEAEKQQYLGARNAHFAIFPNSVLFKKQPKWVMAAELVETSKLW 686
Query: 415 MREVTSIDPKWLVEFAPAFFKFS 437
R V I+P+W+ A K S
Sbjct: 687 GRMVAEIEPEWIEPLAEHLIKKS 709
>sp|Q9HE06|YK99_SCHPO Putative pre-mRNA-splicing factor ATP-dependent RNA helicase
C20H4.09 OS=Schizosaccharomyces pombe (strain 972 / ATCC
24843) GN=SPAC20H4.09 PE=3 SV=1
Length = 647
Score = 101 bits (251), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 58/202 (28%), Positives = 107/202 (52%), Gaps = 5/202 (2%)
Query: 11 QMAEFPLEPNLSKMLIMSVHLQCSDEVLTIVSMLSVQNVFYRP-KDKQALADQKKAKFNQ 69
Q++ L+ N+SK L+ S C+ E+L+I S+L+ VFY P + A + F
Sbjct: 442 QISNSFLDANISKALLTSNQFGCTHEILSIASILTAGEVFYNPTSSSKNDAFVAHSSFFA 501
Query: 70 MEGDHITLLAVYNSWRNNKFSNAWCYENFVQIRTLKRAQDVRKQLLGIMDRHKLDVVSA- 128
EGD IT L V+ S+ NK WC +N++ +TL++A D+R L+ +++ +
Sbjct: 502 NEGDIITALNVFESFVGNKKDLQWCRKNYLNYQTLRQALDIRTHLVRFLNKFSIPTAQRL 561
Query: 129 -GKNTVRVQKAVCSGFFRNAAKKDPQEGYRTLVDSQVVYIHPSSALFNRQPEWVIYHELV 187
+ ++ K + GF RN A Y+T+ Q V++ SS L ++ W++Y V
Sbjct: 562 PSSDCSKILKCLLDGFVRNVAHLQNDGSYKTIGGKQ-VWLDSSSVLHEKKTPWIMYSSAV 620
Query: 188 QT-TKEYMREVTSIDPKWLVEF 208
++ T+ +++ ++ I+ WL ++
Sbjct: 621 ESETQIFVKNISKIESFWLDKY 642
Score = 79.7 bits (195), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 39/109 (35%), Positives = 72/109 (66%), Gaps = 2/109 (1%)
Query: 234 QRTNRISFPPGLLKQAVKKRPEIKLIVTSATLDAVKFSSYFFEAPIFT--IPGRTFPVEV 291
+RT G+LK+ ++KR + +L+++SA++DA K S +F + + T I G+ FPVE
Sbjct: 150 ERTLSTDLLLGVLKRILEKRNDFRLVLSSASVDANKLSQFFGQDKVCTMSIEGKLFPVET 209
Query: 292 LYTKEPETDYLDASLITVMQIHLREPPGDVLLFLTGKLDVRKQLLGIMD 340
L+ ++P +Y+D+++ TV+ I+ PPGD+L+FL+G+ ++ + I D
Sbjct: 210 LFLQKPTENYVDSAIETVININSTYPPGDILVFLSGRKEIEYCIKKIED 258
Score = 59.7 bits (143), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 30/75 (40%), Positives = 45/75 (60%)
Query: 467 SREEIDTACEILYERMKSLGPDVPELIILPVYSALPSEMQTRIFEAAPPGSRKVVIATNI 526
R+EI+ + + + + D L+ LP+++ L + Q R+F RKV+ +TNI
Sbjct: 245 GRKEIEYCIKKIEDSLIHASEDCQTLVPLPLHAGLTVDEQMRVFNIYDGDFRKVIFSTNI 304
Query: 527 AETSLTIDGIFYVVD 541
AETS+TIDGI YVVD
Sbjct: 305 AETSITIDGIVYVVD 319
Score = 44.3 bits (103), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 24/104 (23%), Positives = 53/104 (50%), Gaps = 4/104 (3%)
Query: 329 LDVRKQLLGIMDRHKLDVVSA--GKNTVRVQKAVCSGFFRNAAKKDPQEGYRTLVDSQVV 386
LD+R L+ +++ + + ++ K + GF RN A Y+T+ Q V
Sbjct: 540 LDIRTHLVRFLNKFSIPTAQRLPSSDCSKILKCLLDGFVRNVAHLQNDGSYKTIGGKQ-V 598
Query: 387 YIHPSSALFNRQPEWVIYHELVQT-TKEYMREVTSIDPKWLVEF 429
++ SS L ++ W++Y V++ T+ +++ ++ I+ WL ++
Sbjct: 599 WLDSSSVLHEKKTPWIMYSSAVESETQIFVKNISKIESFWLDKY 642
>sp|P43329|HRPA_ECOLI ATP-dependent RNA helicase HrpA OS=Escherichia coli (strain K12)
GN=hrpA PE=3 SV=3
Length = 1300
Score = 99.0 bits (245), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 61/222 (27%), Positives = 112/222 (50%), Gaps = 9/222 (4%)
Query: 6 VTPIS-QMAEFPLEPNLSKMLIMSVHLQCSDEVLTIVSMLSVQNVFYRPKDKQALADQKK 64
+TP+ Q+++ P++P L++M++ + C E + I S LS+Q+ RP DKQ +D+K
Sbjct: 486 LTPLGRQLSQLPVDPRLARMVLEAQKHGCVREAMIITSALSIQDPRERPMDKQQASDEKH 545
Query: 65 AKFNQMEGDHITLLAVYNSWRNNK---FSNAW---CYENFVQIRTLKRAQDVRKQLLGIM 118
+F+ E D + + ++N + SNA+ C +++ ++ QD+ QL ++
Sbjct: 546 RRFHDKESDFLAFVNLWNYLGEQQKALSSNAFRRLCRTDYLNYLRVREWQDIYTQLRQVV 605
Query: 119 DRHKLDVVSAGKNTVRVQKAVCSGFFRNAAKKDPQEGYRTLVDSQVVYIHPSSALFNRQP 178
+ V S + A+ +G + KD + T + I P S LF + P
Sbjct: 606 KELGIPVNSEPAEYREIHIALLTGLLSHIGMKDADKQEYTGARNARFSIFPGSGLFKKPP 665
Query: 179 EWVIYHELVQTTKEYMREVTSIDPKWLVEFAPAFFK--FSDP 218
+WV+ ELV+T++ + R IDP+W+ A K +S+P
Sbjct: 666 KWVMVAELVETSRLWGRIAARIDPEWVEPVAQHLIKRTYSEP 707
Score = 79.3 bits (194), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 42/108 (38%), Positives = 67/108 (62%), Gaps = 7/108 (6%)
Query: 231 EPLQRTNRISFPPGLLKQAVKKRPEIKLIVTSATLDAVKFSSYFFEAPIFTIPGRTFPVE 290
E +R+ I F G LK+ + +RP++K+I+TSAT+D +FS +F API + GRT+PVE
Sbjct: 198 EAHERSLNIDFLLGYLKELLPRRPDLKIIITSATIDPERFSRHFNNAPIIEVSGRTYPVE 257
Query: 291 VLY------TKEPETDYLDASLITVMQIHLREPPGDVLLFLTGKLDVR 332
V Y + E D L A V ++ +E GD+L+F++G+ ++R
Sbjct: 258 VRYRPIVEEADDTERDQLQAIFDAVDELS-QESHGDILIFMSGEREIR 304
Score = 56.2 bits (134), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 26/59 (44%), Positives = 40/59 (67%), Gaps = 2/59 (3%)
Query: 494 ILPVYSALPSEMQTRIFEAAPPGSRKVVIATNIAETSLTIDGIFYVVDPFDIEVRQAKY 552
ILP+Y+ L + Q R+F++ R++V+ATN+AETSLT+ GI YV+DP + + Y
Sbjct: 320 ILPLYARLSNSEQNRVFQSH--SGRRIVLATNVAETSLTVPGIKYVIDPGTARISRYSY 376
Score = 50.1 bits (118), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 31/112 (27%), Positives = 52/112 (46%), Gaps = 2/112 (1%)
Query: 330 DVRKQLLGIMDRHKLDVVSAGKNTVRVQKAVCSGFFRNAAKKDPQEGYRTLVDSQVVYIH 389
D+ QL ++ + V S + A+ +G + KD + T + I
Sbjct: 596 DIYTQLRQVVKELGIPVNSEPAEYREIHIALLTGLLSHIGMKDADKQEYTGARNARFSIF 655
Query: 390 PSSALFNRQPEWVIYHELVQTTKEYMREVTSIDPKWLVEFAPAFFK--FSDP 439
P S LF + P+WV+ ELV+T++ + R IDP+W+ A K +S+P
Sbjct: 656 PGSGLFKKPPKWVMVAELVETSRLWGRIAARIDPEWVEPVAQHLIKRTYSEP 707
>sp|P36009|DHR2_YEAST Probable ATP-dependent RNA helicase DHR2 OS=Saccharomyces
cerevisiae (strain ATCC 204508 / S288c) GN=DHR2 PE=1
SV=1
Length = 735
Score = 94.4 bits (233), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 68/220 (30%), Positives = 105/220 (47%), Gaps = 23/220 (10%)
Query: 11 QMAEFPLEPNLSKMLIMSVHLQCSDEVLTIVSMLSVQNVFYR--PKDKQALADQKKAKFN 68
QMA PL+P+LS +LI + + C +V+ IVS LSV+N+ P+++ + +++ + N
Sbjct: 499 QMALLPLQPHLSSVLIKASEVGCLSQVIDIVSCLSVENLLLNPSPEERDEVNERRLSLCN 558
Query: 69 QME--GDHITLLAVYN--------SWRNNKFSNAWCYENFVQIRTLKRAQDVRKQLLGIM 118
+ GD I L +++ S + N WC + IR K VR QL
Sbjct: 559 AGKRYGDLIMLKELFDIYFYELGKSQDASSERNDWCKGLCISIRGFKNVIRVRDQLRVYC 618
Query: 119 DR----------HKLDVVSAGKNTVRVQKAVCSGFFRNAAKKDPQEGYRTLVDSQVVYIH 168
R + G+ ++ K +GF +N A P YRT+ + + IH
Sbjct: 619 KRLFSSISEEDEESKKIGEDGELISKILKCFLTGFIKNTAIGMPDRSYRTVSTGEPISIH 678
Query: 169 PSSALF-NRQPEWVIYHELVQTTKEYMREVTSIDPKWLVE 207
PSS LF N+ ++Y E V TTK Y R V+ I+ WL E
Sbjct: 679 PSSMLFMNKSCPGIMYTEYVFTTKGYARNVSRIELSWLQE 718
Score = 75.9 bits (185), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 44/112 (39%), Positives = 65/112 (58%), Gaps = 2/112 (1%)
Query: 231 EPLQRTNRISFPPGLLKQAVKK-RPEIKLIVTSATLDAVKFSSYFFEAPIFTIPGRTFPV 289
E +RT G LK ++ RP++++IV SATL A KFS +F API + GR F V
Sbjct: 204 EAHERTVLTDLILGFLKSLIQGPRPDLRIIVMSATLQAEKFSEFFNNAPILFVEGRKFDV 263
Query: 290 EVLYTKEPETDYLDASLITVMQIHLREPPGDVLLFLTGKLDVRKQLLGIMDR 341
+ Y K P D +DA + +QI+ E GD+L FL G+ ++ K + IM++
Sbjct: 264 KQYYLKAPTDDIVDAVIRCCIQINQGEELGDILCFLPGQEEIDKAVT-IMEK 314
Score = 58.5 bits (140), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 31/80 (38%), Positives = 44/80 (55%), Gaps = 1/80 (1%)
Query: 350 GKNTVRVQKAVCSGFFRNAAKKDPQEGYRTLVDSQVVYIHPSSALF-NRQPEWVIYHELV 408
G+ ++ K +GF +N A P YRT+ + + IHPSS LF N+ ++Y E V
Sbjct: 639 GELISKILKCFLTGFIKNTAIGMPDRSYRTVSTGEPISIHPSSMLFMNKSCPGIMYTEYV 698
Query: 409 QTTKEYMREVTSIDPKWLVE 428
TTK Y R V+ I+ WL E
Sbjct: 699 FTTKGYARNVSRIELSWLQE 718
Score = 58.5 bits (140), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 33/77 (42%), Positives = 49/77 (63%), Gaps = 2/77 (2%)
Query: 467 SREEIDTACEILYERMKSLGPDVPELIILP--VYSALPSEMQTRIFEAAPPGSRKVVIAT 524
+EEID A I+ + K + + P +I+P +Y+ALP+ Q+ +F RKVV +T
Sbjct: 301 GQEEIDKAVTIMEKIAKYVSDEAPVPLIVPYPLYAALPAVQQSLVFAPIKGFKRKVVFST 360
Query: 525 NIAETSLTIDGIFYVVD 541
NIAETS+TI G+ +VVD
Sbjct: 361 NIAETSVTISGVKFVVD 377
>sp|Q8IY37|DHX37_HUMAN Probable ATP-dependent RNA helicase DHX37 OS=Homo sapiens GN=DHX37
PE=1 SV=1
Length = 1157
Score = 89.4 bits (220), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 64/245 (26%), Positives = 117/245 (47%), Gaps = 40/245 (16%)
Query: 12 MAEFPLEPNLSKMLIMSVHLQCSDEVLTIVSMLSVQNVFYRPKDKQALADQ-------KK 64
MA FP+ P +KML +S C +TIV+ ++V+ +F D+ A +D+ K+
Sbjct: 775 MATFPVAPRYAKMLALSRQHGCLPYAITIVASMTVRELFEE-LDRPAASDEELTRLKSKR 833
Query: 65 AKFNQME------------GDHITLLAVYNSWRNNKFSNAWCYENFVQIRTLKRAQDVRK 112
A+ QM+ GD + LL + + +C N ++ + + + +R
Sbjct: 834 ARVAQMKRTWAGQGASLKLGDLMVLLGAVGACEYASCTPQFCEANGLRYKAMMEIRRLRG 893
Query: 113 QLLGIMDR----------HKLDVVSAGKNTVRVQKAVCSGFFRNAAKKDPQE-------- 154
QL ++ K+ + + T +++ V +G + A++ E
Sbjct: 894 QLTTAVNAVCPEAELFVDPKMQPPTESQVTY-LRQIVTAGLGDHLARRVQSEEMLEDKWR 952
Query: 155 -GYRTLVDSQVVYIHPSSALFNRQPEWVIYHELVQTTKEYMREVTSIDPKWLVEFAPAFF 213
Y+T + V+IHPSS LF PE+V+Y E+V+TTK YM+ V+S++ +W+ P++
Sbjct: 953 NAYKTPLLDDPVFIHPSSVLFKELPEFVVYQEIVETTKMYMKGVSSVEVQWIPALLPSYC 1012
Query: 214 KFSDP 218
+F P
Sbjct: 1013 QFDKP 1017
Score = 64.7 bits (156), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 27/66 (40%), Positives = 44/66 (66%)
Query: 374 QEGYRTLVDSQVVYIHPSSALFNRQPEWVIYHELVQTTKEYMREVTSIDPKWLVEFAPAF 433
+ Y+T + V+IHPSS LF PE+V+Y E+V+TTK YM+ V+S++ +W+ P++
Sbjct: 952 RNAYKTPLLDDPVFIHPSSVLFKELPEFVVYQEIVETTKMYMKGVSSVEVQWIPALLPSY 1011
Query: 434 FKFSDP 439
+F P
Sbjct: 1012 CQFDKP 1017
Score = 60.8 bits (146), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 30/57 (52%), Positives = 40/57 (70%)
Query: 492 LIILPVYSALPSEMQTRIFEAAPPGSRKVVIATNIAETSLTIDGIFYVVDPFDIEVR 548
L +LP+YS L E Q ++F+ P G+R V+ATN+AETSLTI GI YVVD ++ R
Sbjct: 588 LHVLPLYSLLAPEKQAQVFKPPPEGTRLCVVATNVAETSLTIPGIKYVVDCGKVKKR 644
Score = 47.4 bits (111), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 33/97 (34%), Positives = 48/97 (49%), Gaps = 9/97 (9%)
Query: 244 GLLKQAVKKRPE----IKLIVTSATLDAVKFSS----YFFEAPIFTIPGRTFPVEVLYTK 295
GLL + V R + +KL++ SATL F+ + P+ + R FPV V + K
Sbjct: 386 GLLSRIVTLRAKRNLPLKLLIMSATLRVEDFTQNPRLFAKPPPVIKVESRQFPVTVHFNK 445
Query: 296 E-PETDYLDASLITVMQIHLREPPGDVLLFLTGKLDV 331
P DY V +IH P G +L+FLTG+ +V
Sbjct: 446 RTPLEDYSGECFRKVCKIHRMLPAGGILVFLTGQAEV 482
>sp|O46072|KZ_DROME Probable ATP-dependent RNA helicase kurz OS=Drosophila melanogaster
GN=kz PE=1 SV=1
Length = 1192
Score = 87.4 bits (215), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 83/306 (27%), Positives = 128/306 (41%), Gaps = 40/306 (13%)
Query: 244 GLLKQAV----KKRPEIKLIVTSATLDAVKFSS----YFFEAPIFTIPGRTFPVEVLYTK 295
GLL + V K+ +KLI+ SATL F+ + P+ + R FPV + + K
Sbjct: 393 GLLSRIVPLRHKRGQPLKLIIMSATLRVSDFTENTRLFKIPPPLLKVEARQFPVTIHFQK 452
Query: 296 EPETDYLDASLITVMQIHLREPPGDVLLFLTGKLDVRKQLLGIMDRHKLDVVSAGKNTVR 355
DY+ + ++IH + P G +L+F+TG+ +V + +V + T
Sbjct: 453 RTPDDYVAEAYRKTLKIHNKLPEGGILIFVTGQQEVNQ------------LVRKLRRTFP 500
Query: 356 VQKAVCSGFFRNAAKKDPQEGYRTLVDSQVVYIHPSSALFNRQPEWVIYHELVQTTKEYM 415
A +N K +E T+ D+ P F+ K +
Sbjct: 501 YHHAPTKDVAKNG-KVSEEEKEETIDDAASTVEDPKELEFD--------------MKRVI 545
Query: 416 REVTSIDPKWLVEFAPAFFKFSDPTKLSKFKKNQRLEPLYNKYEEPNAWRISREEIDTAC 475
R + K+L + A D K + ++ + +E + E+ D
Sbjct: 546 RNIRKSKKKFLAQMALPKINLDD----YKLPGDDTEADMHEQPDEDDEQEGLEEDNDDEL 601
Query: 476 EILYERMKSLGPDVPELIILPVYSALPSEMQTRIFEAAPPGSRKVVIATNIAETSLTIDG 535
+ E G P L +LP+YS L SE Q RIF P G R V++TN+AETSLTI
Sbjct: 602 GLEDESGMGSGQRQP-LWVLPLYSLLSSEKQNRIFLPVPDGCRLCVVSTNVAETSLTIPH 660
Query: 536 IFYVVD 541
I YVVD
Sbjct: 661 IKYVVD 666
Score = 53.9 bits (128), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 54/242 (22%), Positives = 100/242 (41%), Gaps = 43/242 (17%)
Query: 12 MAEFPLEPNLSKMLIMSVHLQCSDEVLTIVSMLSVQNVFY-----RPKDKQALADQKKAK 66
++ FP+ P KML +S + +V+ LSVQ V R +D A++ K
Sbjct: 798 ISRFPVAPRFGKMLALSHQQNLLPYTVCLVAALSVQEVLIETGVQRDEDVAPGANRFHRK 857
Query: 67 FN--------QMEGDHITLLAVYNSWRNNKFSN---AWCYENFVQIRTLKRAQDVRKQLL 115
Q+ GD + LL + +C N ++ + + + +R QL
Sbjct: 858 RQSWAASGNYQLLGDPMVLLRAVGAAEYAGSQGRLPEFCAANGLRQKAMSEVRKLRVQLT 917
Query: 116 GIMDRHKLDVVSAGKNTVR---------VQKAVCSGFFRNAAKKDP-------------Q 153
++ + DV ++ +++ + +G A+K P +
Sbjct: 918 NEINLNVSDVELGVDPELKPPTDAQARFLRQILLAGMGDRVARKVPLADIADKEERRRLK 977
Query: 154 EGYRTLVDSQVVYIHPSSALFNRQPEWVIYHELVQ-----TTKEYMREVTSIDPKWLVEF 208
Y + ++H SS L + PEWVIY E + +TK ++R +T+I+P+WL+ +
Sbjct: 978 YAYNCADMEEPAFLHVSSVLRQKAPEWVIYQEAYELQNGDSTKMFIRGITAIEPEWLLLY 1037
Query: 209 AP 210
P
Sbjct: 1038 VP 1039
Score = 47.4 bits (111), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 20/51 (39%), Positives = 33/51 (64%), Gaps = 5/51 (9%)
Query: 386 VYIHPSSALFNRQPEWVIYHELVQ-----TTKEYMREVTSIDPKWLVEFAP 431
++H SS L + PEWVIY E + +TK ++R +T+I+P+WL+ + P
Sbjct: 989 AFLHVSSVLRQKAPEWVIYQEAYELQNGDSTKMFIRGITAIEPEWLLLYVP 1039
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.321 0.135 0.398
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 203,009,300
Number of Sequences: 539616
Number of extensions: 8399405
Number of successful extensions: 21327
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 112
Number of HSP's successfully gapped in prelim test: 7
Number of HSP's that attempted gapping in prelim test: 20717
Number of HSP's gapped (non-prelim): 418
length of query: 558
length of database: 191,569,459
effective HSP length: 123
effective length of query: 435
effective length of database: 125,196,691
effective search space: 54460560585
effective search space used: 54460560585
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 64 (29.3 bits)