Your job contains 1 sequence.
>psy12726
MDSLVVTPISQMAEFPLEPNLSKMLIMSVHLQCSDEVLTIVSMLSVQNVFYRPKDKQALA
DQKKAKFNQMEGDHITLLAVYNSWRNNKFSNAWCYENFVQIRTLKRAQDVRKQLLGIMDR
HKLDVVSAGKNTVRVQKAVCSGFFRNAAKKDPQEGYRTLVDSQVVYIHPSSALFNRQPEW
VIYHELVQTTKEYMREVTSIDPKWLVEFAPAFFKFSDPTKLSKFKKNQRLEPLQRTNRIS
FPPGLLKQAVKKRPEIKLIVTSATLDAVKFSSYFFEAPIFTIPGRTFPVEVLYTKEPETD
YLDASLITVMQIHLREPPGDVLLFLTGKLDVRKQLLGIMDRHKLDVVSAGKNTVRVQKAV
CSGFFRNAAKKDPQEGYRTLVDSQVVYIHPSSALFNRQPEWVIYHELVQTTKEYMREVTS
IDPKWLVEFAPAFFKFSDPTKLSKFKKNQRLEPLYNKYEEPNAWRISREEIDTACEILYE
RMKSLGPDVPELIILPVYSALPSEMQTRIFEAAPPGSRKVVIATNIAETSLTIDGIFYVV
DPFDIEVRQAKYHRCAVV
The BLAST search returned 6 gene products which did not match your query constraints. Please see the full BLAST report below for the details.
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= psy12726
(558 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
FB|FBgn0086895 - symbol:pea "peanuts" species:7227 "Droso... 1049 3.1e-110 2
UNIPROTKB|F1S1H3 - symbol:DHX8 "Uncharacterized protein" ... 976 5.6e-103 2
UNIPROTKB|E2R9R9 - symbol:DHX8 "Uncharacterized protein" ... 976 5.8e-103 2
UNIPROTKB|Q14562 - symbol:DHX8 "ATP-dependent RNA helicas... 976 5.9e-103 2
UNIPROTKB|F1MEM4 - symbol:DHX8 "Uncharacterized protein" ... 976 6.3e-103 2
UNIPROTKB|D4A805 - symbol:Dhx8 "Protein Dhx8" species:101... 976 6.8e-103 2
MGI|MGI:1306823 - symbol:Dhx8 "DEAH (Asp-Glu-Ala-His) box... 976 6.9e-103 2
UNIPROTKB|F1P306 - symbol:LOC100858239 "Uncharacterized p... 973 8.7e-103 2
ZFIN|ZDB-GENE-050809-39 - symbol:dhx8 "DEAH (Asp-Glu-Ala-... 969 2.0e-102 2
RGD|1310723 - symbol:Dhx8 "DEAH (Asp-Glu-Ala-His) box pol... 972 2.0e-100 2
WB|WBGene00003393 - symbol:mog-5 species:6239 "Caenorhabd... 884 9.2e-94 3
UNIPROTKB|Q09530 - symbol:mog-5 "Probable pre-mRNA-splici... 884 9.2e-94 3
DICTYBASE|DDB_G0291183 - symbol:dhx8 "putative RNA splici... 846 9.1e-88 2
TAIR|locus:2088847 - symbol:AT3G26560 species:3702 "Arabi... 801 5.6e-87 2
UNIPROTKB|G4NFJ0 - symbol:MGG_08807 "Pre-mRNA-splicing fa... 691 5.2e-76 2
POMBASE|SPAC10F6.02c - symbol:prp22 "ATP-dependent RNA he... 647 8.9e-76 3
ASPGD|ASPL0000070923 - symbol:AN4721 species:162425 "Emer... 707 1.9e-74 2
UNIPROTKB|F5H658 - symbol:DHX8 "ATP-dependent RNA helicas... 719 3.6e-72 2
GENEDB_PFALCIPARUM|PF10_0294 - symbol:PF10_0294 "RNA heli... 623 5.3e-64 2
UNIPROTKB|Q8IJA4 - symbol:PF10_0294 "RNA helicase, putati... 623 5.3e-64 2
CGD|CAL0004768 - symbol:PRP22 species:5476 "Candida albic... 579 4.4e-57 2
FB|FBgn0086444 - symbol:l(2)37Cb "lethal (2) 37Cb" specie... 546 4.7e-52 1
DICTYBASE|DDB_G0285937 - symbol:dhx16 "putative RNA splic... 526 4.4e-51 2
TAIR|locus:2033723 - symbol:ESP3 "ENHANCED SILENCING PHEN... 525 6.6e-51 2
TAIR|locus:2062492 - symbol:MEE29 "maternal effect embryo... 523 8.5e-51 2
ZFIN|ZDB-GENE-030131-8589 - symbol:dhx16 "DEAH (Asp-Glu-A... 518 6.5e-50 2
UNIPROTKB|Q5SQH5 - symbol:DHX16 "Putative pre-mRNA-splici... 517 1.2e-49 1
UNIPROTKB|Q5JP46 - symbol:DHX16 "Putative pre-mRNA-splici... 517 1.2e-49 1
RGD|1302963 - symbol:Dhx16 "DEAH (Asp-Glu-Ala-His) box po... 523 2.8e-49 1
UNIPROTKB|O60231 - symbol:DHX16 "Putative pre-mRNA-splici... 517 1.2e-48 1
UNIPROTKB|F1PGL2 - symbol:DHX16 "Uncharacterized protein"... 517 1.2e-48 1
UNIPROTKB|E1BF68 - symbol:DHX16 "Uncharacterized protein"... 516 1.6e-48 1
UNIPROTKB|F1RU83 - symbol:DHX16 "Putative pre-mRNA-splici... 516 1.6e-48 1
UNIPROTKB|Q767K6 - symbol:DHX16 "Putative pre-mRNA-splici... 516 1.6e-48 1
SGD|S000000815 - symbol:PRP22 "DEAH-box RNA-dependent ATP... 514 1.9e-48 3
WB|WBGene00003392 - symbol:mog-4 species:6239 "Caenorhabd... 497 1.6e-46 1
UNIPROTKB|O45244 - symbol:mog-4 "Probable pre-mRNA-splici... 497 1.6e-46 1
DICTYBASE|DDB_G0285843 - symbol:helD "putative RNA splici... 483 5.1e-46 2
SGD|S000001794 - symbol:PRP16 "DEAH-box RNA helicase invo... 475 7.4e-46 2
WB|WBGene00003389 - symbol:mog-1 species:6239 "Caenorhabd... 482 8.8e-45 1
UNIPROTKB|P34498 - symbol:mog-1 "Probable pre-mRNA-splici... 482 8.8e-45 1
POMBASE|SPBC19C2.01 - symbol:cdc28 "ATP-dependent RNA hel... 480 1.2e-44 1
POMBASE|SPBC16H5.10c - symbol:prp43 "ATP-dependent RNA he... 452 1.2e-44 2
UNIPROTKB|G4MTU4 - symbol:MGG_11351 "Pre-mRNA-splicing fa... 461 2.7e-44 2
ASPGD|ASPL0000006947 - symbol:AN5827 species:162425 "Emer... 461 9.4e-44 2
ZFIN|ZDB-GENE-040426-1144 - symbol:dhx38 "DEAH (Asp-Glu-A... 472 1.3e-43 1
ASPGD|ASPL0000014477 - symbol:AN4032 species:162425 "Emer... 452 1.7e-43 2
FB|FBgn0026713 - symbol:l(1)G0007 "lethal (1) G0007" spec... 470 2.0e-43 1
WB|WBGene00018967 - symbol:F56D2.6 species:6239 "Caenorha... 460 4.6e-43 1
UNIPROTKB|Q20875 - symbol:F56D2.6 "Putative pre-mRNA-spli... 460 4.6e-43 1
DICTYBASE|DDB_G0285213 - symbol:dhx15 "putative RNA splic... 455 1.5e-42 1
ZFIN|ZDB-GENE-030131-650 - symbol:dhx15 "DEAH (Asp-Glu-Al... 456 1.6e-42 1
ZFIN|ZDB-GENE-070410-11 - symbol:zgc:158828 "zgc:158828" ... 436 1.7e-42 2
ASPGD|ASPL0000059403 - symbol:AN0133 species:162425 "Emer... 432 2.3e-42 2
UNIPROTKB|B4DVG8 - symbol:DHX38 "Uncharacterized protein"... 447 3.2e-42 1
UNIPROTKB|F1NHI3 - symbol:DHX15 "Uncharacterized protein"... 453 3.2e-42 1
UNIPROTKB|A5D7D9 - symbol:DHX15 "Uncharacterized protein"... 453 4.0e-42 1
UNIPROTKB|E2R2U3 - symbol:DHX15 "Uncharacterized protein"... 453 4.0e-42 1
UNIPROTKB|O43143 - symbol:DHX15 "Putative pre-mRNA-splici... 453 4.0e-42 1
UNIPROTKB|F1S5A8 - symbol:DHX15 "Uncharacterized protein"... 453 4.0e-42 1
MGI|MGI:1099786 - symbol:Dhx15 "DEAH (Asp-Glu-Ala-His) bo... 453 4.0e-42 1
RGD|1308072 - symbol:Dhx15 "DEAH (Asp-Glu-Ala-His) box po... 453 4.0e-42 1
TAIR|locus:2065210 - symbol:AT2G47250 species:3702 "Arabi... 451 4.2e-42 1
TAIR|locus:2095989 - symbol:AT3G62310 species:3702 "Arabi... 450 5.3e-42 1
UNIPROTKB|F1S3A8 - symbol:DHX38 "Uncharacterized protein"... 447 1.5e-41 1
UNIPROTKB|E1C094 - symbol:E1C094 "Uncharacterized protein... 452 1.5e-41 1
UNIPROTKB|F1NY80 - symbol:F1NY80 "Uncharacterized protein... 452 1.6e-41 1
POMBASE|SPBC1711.17 - symbol:prp16 "ATP-dependent RNA hel... 441 1.7e-41 2
GENEDB_PFALCIPARUM|MAL13P1.322 - symbol:MAL13P1.322 "spli... 436 4.2e-41 2
UNIPROTKB|C0H5K5 - symbol:MAL13P1.322 "Splicing factor, p... 436 4.2e-41 2
SGD|S000003088 - symbol:PRP43 "RNA helicase in the DEAH-b... 441 4.7e-41 2
FB|FBgn0033160 - symbol:CG11107 species:7227 "Drosophila ... 441 5.4e-41 1
UNIPROTKB|E2RC56 - symbol:DHX38 "Uncharacterized protein"... 447 5.9e-41 1
UNIPROTKB|Q92620 - symbol:DHX38 "Pre-mRNA-splicing factor... 447 5.9e-41 1
RGD|1310345 - symbol:Dhx38 "DEAH (Asp-Glu-Ala-His) box po... 447 5.9e-41 1
UNIPROTKB|I3LU50 - symbol:I3LU50 "Uncharacterized protein... 264 1.1e-40 2
UNIPROTKB|F1MVJ1 - symbol:DHX38 "Pre-mRNA-splicing factor... 443 1.6e-40 1
UNIPROTKB|Q17R09 - symbol:DHX38 "Pre-mRNA-splicing factor... 443 1.6e-40 1
UNIPROTKB|B0V0F7 - symbol:DHX16 "Putative pre-mRNA-splici... 295 2.2e-40 2
UNIPROTKB|G4N1N4 - symbol:MGG_07501 "ATP-dependent RNA he... 435 6.5e-40 2
UNIPROTKB|E1BYA5 - symbol:DHX33 "Uncharacterized protein"... 425 1.7e-39 1
UNIPROTKB|G4NHA6 - symbol:MGG_03893 "Pre-mRNA-splicing fa... 410 4.5e-39 2
UNIPROTKB|D3ZZG1 - symbol:Dhx35 "Protein Dhx35" species:1... 420 9.2e-39 1
UNIPROTKB|E1C4U5 - symbol:DHX35 "Uncharacterized protein"... 419 1.2e-38 1
CGD|CAL0000153 - symbol:orf19.1687 species:5476 "Candida ... 419 1.3e-38 2
UNIPROTKB|E1BDN4 - symbol:DHX35 "Uncharacterized protein"... 416 2.5e-38 1
UNIPROTKB|F5GXM6 - symbol:DHX35 "Probable ATP-dependent R... 411 7.1e-38 1
UNIPROTKB|Q9H5Z1 - symbol:DHX35 "Probable ATP-dependent R... 411 9.0e-38 1
DICTYBASE|DDB_G0269306 - symbol:dhx35 "DEAD/DEAH box heli... 410 1.3e-37 1
UNIPROTKB|F1SDW0 - symbol:DHX35 "Uncharacterized protein"... 409 1.7e-37 1
DICTYBASE|DDB_G0270110 - symbol:dhx33 "DEAD/DEAH box heli... 401 1.3e-36 1
TAIR|locus:2147785 - symbol:AT5G14900 species:3702 "Arabi... 393 1.7e-36 1
RGD|1307239 - symbol:Dhx33 "DEAH (Asp-Glu-Ala-His) box po... 391 2.7e-36 1
UNIPROTKB|F1MWZ4 - symbol:F1MWZ4 "Uncharacterized protein... 400 3.1e-36 1
UNIPROTKB|Q05BE5 - symbol:DHX33 "DEAH (Asp-Glu-Ala-His) b... 390 3.5e-36 1
CGD|CAL0005059 - symbol:orf19.2818 species:5476 "Candida ... 401 3.7e-36 1
UNIPROTKB|B0V0F8 - symbol:DHX16 "Putative pre-mRNA-splici... 297 8.4e-36 2
UNIPROTKB|F1PRA1 - symbol:DHX33 "Uncharacterized protein"... 396 1.5e-35 1
SGD|S000005294 - symbol:PRP2 "RNA-dependent ATPase in the... 260 7.4e-35 2
UNIPROTKB|I3L1L6 - symbol:DHX33 "Putative ATP-dependent R... 390 1.5e-34 1
WARNING: Descriptions of 197 database sequences were not reported due to the
limiting value of parameter V = 100.
>FB|FBgn0086895 [details] [associations]
symbol:pea "peanuts" species:7227 "Drosophila melanogaster"
[GO:0007286 "spermatid development" evidence=IMP] [GO:0005681
"spliceosomal complex" evidence=ISS] [GO:0004004 "ATP-dependent RNA
helicase activity" evidence=ISS] [GO:0000398 "mRNA splicing, via
spliceosome" evidence=IC;ISS] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IC] [GO:0000381 "regulation of alternative mRNA
splicing, via spliceosome" evidence=IMP] [GO:0071013 "catalytic
step 2 spliceosome" evidence=IDA] [GO:0071011 "precatalytic
spliceosome" evidence=IDA] [GO:0022008 "neurogenesis" evidence=IMP]
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR003029
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF00575 Pfam:PF04408 PROSITE:PS00690 PROSITE:PS50126
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 EMBL:AE013599
GO:GO:0005524 GO:GO:0022008 GO:GO:0007286 GO:GO:0003723
Gene3D:2.40.50.140 InterPro:IPR012340 SUPFAM:SSF50249 GO:GO:0071011
GO:GO:0000398 GO:GO:0071013 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
GO:GO:0004004 GO:GO:0000381 InterPro:IPR022967 SMART:SM00316
GeneTree:ENSGT00700000104241 KO:K12818 OMA:NAWCYEN EMBL:BT044222
RefSeq:NP_610928.1 UniGene:Dm.12451 SMR:A1Z9L3 STRING:A1Z9L3
EnsemblMetazoa:FBtr0087518 GeneID:36561 KEGG:dme:Dmel_CG8241
UCSC:CG8241-RA CTD:36561 FlyBase:FBgn0086895 InParanoid:A1Z9L3
OrthoDB:EOG437PVS GenomeRNAi:36561 NextBio:799212 Uniprot:A1Z9L3
Length = 1242
Score = 1049 (374.3 bits), Expect = 1.0e-109, Sum P(2) = 1.0e-109
Identities = 201/243 (82%), Positives = 215/243 (88%)
Query: 11 QMAEFPLEPNLSKMLIMSVHLQCSDEVLTIVSMLSVQNVFYRPXXXXXXXXXXXXXFNQM 70
+MAEFPLEPNLSKMLIMSV LQCSDE+LTIVSMLSVQNVFYRP FNQ
Sbjct: 1000 RMAEFPLEPNLSKMLIMSVALQCSDEILTIVSMLSVQNVFYRPKDKQALADQKKAKFNQA 1059
Query: 71 EGDHITLLAVYNSWRNNKFSNAWCYENFVQIRTLKRAQDVRKQLLGIMDRHKLDVVSAGK 130
EGDH+TLLAVYNSW+NNKFSNAWCYENFVQIRTLKR+QDVRKQLLGIMDRHKLDVVSAGK
Sbjct: 1060 EGDHLTLLAVYNSWKNNKFSNAWCYENFVQIRTLKRSQDVRKQLLGIMDRHKLDVVSAGK 1119
Query: 131 NTVRVQKAVCSGFFRNAAKKDPQEGYRTLVDSQVVYIHPSSALFNRQPEWVIYHELVQTT 190
N+VR+QKA+CSGFFRNAAKKDPQEGYRTLVDSQVVYIHPSSALFNRQPEWVIYHELVQTT
Sbjct: 1120 NSVRIQKAICSGFFRNAAKKDPQEGYRTLVDSQVVYIHPSSALFNRQPEWVIYHELVQTT 1179
Query: 191 KEYMREVTSIDPKWLVEFAPAFFKFSDPTKLSKFKKNQRLEPLQRTNRISFPPGLLKQAV 250
KEYMREVT+IDPKWLVEFAP+FF+FSDPTKLSKFKKNQRLEPL N+ P V
Sbjct: 1180 KEYMREVTTIDPKWLVEFAPSFFRFSDPTKLSKFKKNQRLEPLY--NKYEEPNAWRISRV 1237
Query: 251 KKR 253
++R
Sbjct: 1238 RRR 1240
Score = 719 (258.2 bits), Expect = 3.1e-110, Sum P(2) = 3.1e-110
Identities = 133/139 (95%), Positives = 139/139 (100%)
Query: 330 DVRKQLLGIMDRHKLDVVSAGKNTVRVQKAVCSGFFRNAAKKDPQEGYRTLVDSQVVYIH 389
DVRKQLLGIMDRHKLDVVSAGKN+VR+QKA+CSGFFRNAAKKDPQEGYRTLVDSQVVYIH
Sbjct: 1098 DVRKQLLGIMDRHKLDVVSAGKNSVRIQKAICSGFFRNAAKKDPQEGYRTLVDSQVVYIH 1157
Query: 390 PSSALFNRQPEWVIYHELVQTTKEYMREVTSIDPKWLVEFAPAFFKFSDPTKLSKFKKNQ 449
PSSALFNRQPEWVIYHELVQTTKEYMREVT+IDPKWLVEFAP+FF+FSDPTKLSKFKKNQ
Sbjct: 1158 PSSALFNRQPEWVIYHELVQTTKEYMREVTTIDPKWLVEFAPSFFRFSDPTKLSKFKKNQ 1217
Query: 450 RLEPLYNKYEEPNAWRISR 468
RLEPLYNKYEEPNAWRISR
Sbjct: 1218 RLEPLYNKYEEPNAWRISR 1236
Score = 407 (148.3 bits), Expect = 3.1e-110, Sum P(2) = 3.1e-110
Identities = 81/101 (80%), Positives = 89/101 (88%)
Query: 231 EPLQRTNRISFPPGLLKQAVKKRPEIKLIVTSATLDAVKFSSYFFEAPIFTIPGRTFPVE 290
E +RT GLLK AV+KRPE+KLIVTSATLDAVKFS YFF+APIFTIPGRTFPVE
Sbjct: 707 EAHERTIHTDVLFGLLKTAVQKRPELKLIVTSATLDAVKFSQYFFKAPIFTIPGRTFPVE 766
Query: 291 VLYTKEPETDYLDASLITVMQIHLREPPGDVLLFLTGKLDV 331
VLYTKEPETDYLDASLITVMQIHLREPPGD+LLFLTG+ ++
Sbjct: 767 VLYTKEPETDYLDASLITVMQIHLREPPGDILLFLTGQEEI 807
Score = 357 (130.7 bits), Expect = 3.1e-71, Sum P(2) = 3.1e-71
Identities = 71/75 (94%), Positives = 73/75 (97%)
Query: 468 REEIDTACEILYERMKSLGPDVPELIILPVYSALPSEMQTRIFEAAPPGSRKVVIATNIA 527
+EEIDTACEILYERMKSLGPDVPELIILPVYSALPSEMQTRIF+ AP GSRKVVIATNIA
Sbjct: 804 QEEIDTACEILYERMKSLGPDVPELIILPVYSALPSEMQTRIFDPAPAGSRKVVIATNIA 863
Query: 528 ETSLTIDGIFYVVDP 542
ETSLTIDGIFYVVDP
Sbjct: 864 ETSLTIDGIFYVVDP 878
Score = 55 (24.4 bits), Expect = 1.0e-109, Sum P(2) = 1.0e-109
Identities = 12/13 (92%), Positives = 12/13 (92%)
Query: 1 MDSLVVTPISQMA 13
MDSLVVTPISQ A
Sbjct: 892 MDSLVVTPISQAA 904
>UNIPROTKB|F1S1H3 [details] [associations]
symbol:DHX8 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0071013 "catalytic step 2 spliceosome" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0003723 "RNA binding"
evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR003029 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF00575 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS50126 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
GO:GO:0005524 GO:GO:0003723 Gene3D:2.40.50.140 InterPro:IPR012340
SUPFAM:SSF50249 GO:GO:0071013 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
InterPro:IPR022967 SMART:SM00316 GeneTree:ENSGT00700000104241
KO:K12818 OMA:NAWCYEN CTD:1659 EMBL:FP102477 RefSeq:XP_003131427.2
Ensembl:ENSSSCT00000018917 GeneID:100517118 KEGG:ssc:100517118
Uniprot:F1S1H3
Length = 1212
Score = 976 (348.6 bits), Expect = 7.5e-101, Sum P(2) = 7.5e-101
Identities = 186/244 (76%), Positives = 207/244 (84%)
Query: 11 QMAEFPLEPNLSKMLIMSVHLQCSDEVLTIVSMLSVQNVFYRPXXXXXXXXXXXXXFNQM 70
+MAEFPLEP L KMLIMSVHL CS+E+LTIVSMLSVQNVFYRP F+Q
Sbjct: 971 RMAEFPLEPMLCKMLIMSVHLGCSEEMLTIVSMLSVQNVFYRPKDKQALADQKKAKFHQT 1030
Query: 71 EGDHITLLAVYNSWRNNKFSNAWCYENFVQIRTLKRAQDVRKQLLGIMDRHKLDVVSAGK 130
EGDH+TLLAVYNSW+NNKFSN WCYENF+Q R+L+RAQD+RKQ+LGIMDRHKLDVVS GK
Sbjct: 1031 EGDHLTLLAVYNSWKNNKFSNPWCYENFIQARSLRRAQDIRKQMLGIMDRHKLDVVSCGK 1090
Query: 131 NTVRVQKAVCSGFFRNAAKKDPQEGYRTLVDSQVVYIHPSSALFNRQPEWVIYHELVQTT 190
+TVRVQKA+CSGFFRNAAKKDPQEGYRTL+D QVVYIHPSSALFNRQPEWV+YHELV TT
Sbjct: 1091 STVRVQKAICSGFFRNAAKKDPQEGYRTLIDQQVVYIHPSSALFNRQPEWVVYHELVLTT 1150
Query: 191 KEYMREVTSIDPKWLVEFAPAFFKFSDPTKLSKFKKNQRLEPLQRTNRISFPPGL-LKQA 249
KEYMREVT+IDP+WLVEFAPAFFK SDPTKLSK KK QRLEPL NR P + +A
Sbjct: 1151 KEYMREVTTIDPRWLVEFAPAFFKVSDPTKLSKQKKQQRLEPLY--NRYEEPNAWRISRA 1208
Query: 250 VKKR 253
++R
Sbjct: 1209 FRRR 1212
Score = 677 (243.4 bits), Expect = 5.6e-103, Sum P(2) = 5.6e-103
Identities = 124/139 (89%), Positives = 133/139 (95%)
Query: 330 DVRKQLLGIMDRHKLDVVSAGKNTVRVQKAVCSGFFRNAAKKDPQEGYRTLVDSQVVYIH 389
D+RKQ+LGIMDRHKLDVVS GK+TVRVQKA+CSGFFRNAAKKDPQEGYRTL+D QVVYIH
Sbjct: 1069 DIRKQMLGIMDRHKLDVVSCGKSTVRVQKAICSGFFRNAAKKDPQEGYRTLIDQQVVYIH 1128
Query: 390 PSSALFNRQPEWVIYHELVQTTKEYMREVTSIDPKWLVEFAPAFFKFSDPTKLSKFKKNQ 449
PSSALFNRQPEWV+YHELV TTKEYMREVT+IDP+WLVEFAPAFFK SDPTKLSK KK Q
Sbjct: 1129 PSSALFNRQPEWVVYHELVLTTKEYMREVTTIDPRWLVEFAPAFFKVSDPTKLSKQKKQQ 1188
Query: 450 RLEPLYNKYEEPNAWRISR 468
RLEPLYN+YEEPNAWRISR
Sbjct: 1189 RLEPLYNRYEEPNAWRISR 1207
Score = 381 (139.2 bits), Expect = 5.6e-103, Sum P(2) = 5.6e-103
Identities = 74/101 (73%), Positives = 87/101 (86%)
Query: 231 EPLQRTNRISFPPGLLKQAVKKRPEIKLIVTSATLDAVKFSSYFFEAPIFTIPGRTFPVE 290
E +RT GLLK+ V+KR ++KLIVTSATLDAVKFS YF+EAPIFTIPGRT+PVE
Sbjct: 678 EAHERTIHTDVLFGLLKKTVQKRQDMKLIVTSATLDAVKFSQYFYEAPIFTIPGRTYPVE 737
Query: 291 VLYTKEPETDYLDASLITVMQIHLREPPGDVLLFLTGKLDV 331
+LYTKEPETDYLDASLITVMQIHL EPPGD+L+FLTG+ ++
Sbjct: 738 ILYTKEPETDYLDASLITVMQIHLTEPPGDILVFLTGQEEI 778
Score = 362 (132.5 bits), Expect = 3.9e-66, Sum P(2) = 3.9e-66
Identities = 71/75 (94%), Positives = 74/75 (98%)
Query: 468 REEIDTACEILYERMKSLGPDVPELIILPVYSALPSEMQTRIFEAAPPGSRKVVIATNIA 527
+EEIDTACEILYERMKSLGPDVPELIILPVYSALPSEMQTRIF+ APPGSRKVVIATNIA
Sbjct: 775 QEEIDTACEILYERMKSLGPDVPELIILPVYSALPSEMQTRIFDPAPPGSRKVVIATNIA 834
Query: 528 ETSLTIDGIFYVVDP 542
ETSLTIDGI+YVVDP
Sbjct: 835 ETSLTIDGIYYVVDP 849
Score = 44 (20.5 bits), Expect = 7.5e-101, Sum P(2) = 7.5e-101
Identities = 9/11 (81%), Positives = 10/11 (90%)
Query: 1 MDSLVVTPISQ 11
+D LVVTPISQ
Sbjct: 863 IDQLVVTPISQ 873
>UNIPROTKB|E2R9R9 [details] [associations]
symbol:DHX8 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0071013 "catalytic step 2 spliceosome"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0003723 "RNA
binding" evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR003029 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF00575 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS50126 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
GO:GO:0005524 GO:GO:0003723 Gene3D:2.40.50.140 InterPro:IPR012340
SUPFAM:SSF50249 GO:GO:0071013 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
InterPro:IPR022967 SMART:SM00316 GeneTree:ENSGT00700000104241
KO:K12818 OMA:NAWCYEN CTD:1659 EMBL:AAEX03006434 EMBL:AAEX03006433
RefSeq:XP_537627.2 ProteinModelPortal:E2R9R9
Ensembl:ENSCAFT00000023129 GeneID:480507 KEGG:cfa:480507
Uniprot:E2R9R9
Length = 1216
Score = 976 (348.6 bits), Expect = 7.5e-101, Sum P(2) = 7.5e-101
Identities = 186/244 (76%), Positives = 207/244 (84%)
Query: 11 QMAEFPLEPNLSKMLIMSVHLQCSDEVLTIVSMLSVQNVFYRPXXXXXXXXXXXXXFNQM 70
+MAEFPLEP L KMLIMSVHL CS+E+LTIVSMLSVQNVFYRP F+Q
Sbjct: 975 RMAEFPLEPMLCKMLIMSVHLGCSEEMLTIVSMLSVQNVFYRPKDKQALADQKKAKFHQT 1034
Query: 71 EGDHITLLAVYNSWRNNKFSNAWCYENFVQIRTLKRAQDVRKQLLGIMDRHKLDVVSAGK 130
EGDH+TLLAVYNSW+NNKFSN WCYENF+Q R+L+RAQD+RKQ+LGIMDRHKLDVVS GK
Sbjct: 1035 EGDHLTLLAVYNSWKNNKFSNPWCYENFIQARSLRRAQDIRKQMLGIMDRHKLDVVSCGK 1094
Query: 131 NTVRVQKAVCSGFFRNAAKKDPQEGYRTLVDSQVVYIHPSSALFNRQPEWVIYHELVQTT 190
+TVRVQKA+CSGFFRNAAKKDPQEGYRTL+D QVVYIHPSSALFNRQPEWV+YHELV TT
Sbjct: 1095 STVRVQKAICSGFFRNAAKKDPQEGYRTLIDQQVVYIHPSSALFNRQPEWVVYHELVLTT 1154
Query: 191 KEYMREVTSIDPKWLVEFAPAFFKFSDPTKLSKFKKNQRLEPLQRTNRISFPPGL-LKQA 249
KEYMREVT+IDP+WLVEFAPAFFK SDPTKLSK KK QRLEPL NR P + +A
Sbjct: 1155 KEYMREVTTIDPRWLVEFAPAFFKVSDPTKLSKQKKQQRLEPLY--NRYEEPNAWRISRA 1212
Query: 250 VKKR 253
++R
Sbjct: 1213 FRRR 1216
Score = 677 (243.4 bits), Expect = 5.8e-103, Sum P(2) = 5.8e-103
Identities = 124/139 (89%), Positives = 133/139 (95%)
Query: 330 DVRKQLLGIMDRHKLDVVSAGKNTVRVQKAVCSGFFRNAAKKDPQEGYRTLVDSQVVYIH 389
D+RKQ+LGIMDRHKLDVVS GK+TVRVQKA+CSGFFRNAAKKDPQEGYRTL+D QVVYIH
Sbjct: 1073 DIRKQMLGIMDRHKLDVVSCGKSTVRVQKAICSGFFRNAAKKDPQEGYRTLIDQQVVYIH 1132
Query: 390 PSSALFNRQPEWVIYHELVQTTKEYMREVTSIDPKWLVEFAPAFFKFSDPTKLSKFKKNQ 449
PSSALFNRQPEWV+YHELV TTKEYMREVT+IDP+WLVEFAPAFFK SDPTKLSK KK Q
Sbjct: 1133 PSSALFNRQPEWVVYHELVLTTKEYMREVTTIDPRWLVEFAPAFFKVSDPTKLSKQKKQQ 1192
Query: 450 RLEPLYNKYEEPNAWRISR 468
RLEPLYN+YEEPNAWRISR
Sbjct: 1193 RLEPLYNRYEEPNAWRISR 1211
Score = 381 (139.2 bits), Expect = 5.8e-103, Sum P(2) = 5.8e-103
Identities = 74/101 (73%), Positives = 87/101 (86%)
Query: 231 EPLQRTNRISFPPGLLKQAVKKRPEIKLIVTSATLDAVKFSSYFFEAPIFTIPGRTFPVE 290
E +RT GLLK+ V+KR ++KLIVTSATLDAVKFS YF+EAPIFTIPGRT+PVE
Sbjct: 682 EAHERTIHTDVLFGLLKKTVQKRQDMKLIVTSATLDAVKFSQYFYEAPIFTIPGRTYPVE 741
Query: 291 VLYTKEPETDYLDASLITVMQIHLREPPGDVLLFLTGKLDV 331
+LYTKEPETDYLDASLITVMQIHL EPPGD+L+FLTG+ ++
Sbjct: 742 ILYTKEPETDYLDASLITVMQIHLTEPPGDILVFLTGQEEI 782
Score = 362 (132.5 bits), Expect = 4.0e-66, Sum P(2) = 4.0e-66
Identities = 71/75 (94%), Positives = 74/75 (98%)
Query: 468 REEIDTACEILYERMKSLGPDVPELIILPVYSALPSEMQTRIFEAAPPGSRKVVIATNIA 527
+EEIDTACEILYERMKSLGPDVPELIILPVYSALPSEMQTRIF+ APPGSRKVVIATNIA
Sbjct: 779 QEEIDTACEILYERMKSLGPDVPELIILPVYSALPSEMQTRIFDPAPPGSRKVVIATNIA 838
Query: 528 ETSLTIDGIFYVVDP 542
ETSLTIDGI+YVVDP
Sbjct: 839 ETSLTIDGIYYVVDP 853
Score = 44 (20.5 bits), Expect = 7.5e-101, Sum P(2) = 7.5e-101
Identities = 9/11 (81%), Positives = 10/11 (90%)
Query: 1 MDSLVVTPISQ 11
+D LVVTPISQ
Sbjct: 867 IDQLVVTPISQ 877
>UNIPROTKB|Q14562 [details] [associations]
symbol:DHX8 "ATP-dependent RNA helicase DHX8" species:9606
"Homo sapiens" [GO:0003723 "RNA binding" evidence=IEA] [GO:0005524
"ATP binding" evidence=IEA] [GO:0071013 "catalytic step 2
spliceosome" evidence=IDA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0000398 "mRNA splicing, via spliceosome"
evidence=IC] [GO:0004004 "ATP-dependent RNA helicase activity"
evidence=TAS] [GO:0005681 "spliceosomal complex" evidence=TAS]
[GO:0008380 "RNA splicing" evidence=TAS] [GO:0006396 "RNA
processing" evidence=TAS] [GO:0005634 "nucleus" evidence=IDA]
[GO:0005730 "nucleolus" evidence=IDA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR003029 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF00575
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS50126 PROSITE:PS51194
SMART:SM00490 SMART:SM00847 EMBL:D50487 GO:GO:0005524 GO:GO:0003723
Gene3D:2.40.50.140 InterPro:IPR012340 SUPFAM:SSF50249 GO:GO:0000398
GO:GO:0071013 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717 GO:GO:0004004
HOGENOM:HOG000175261 InterPro:IPR022967 SMART:SM00316
HOVERGEN:HBG039428 KO:K12818 OMA:NAWCYEN IPI:IPI00031508 PIR:A56236
RefSeq:NP_004932.1 UniGene:Hs.463105 PDB:2EQS PDB:3I4U PDBsum:2EQS
PDBsum:3I4U ProteinModelPortal:Q14562 SMR:Q14562 IntAct:Q14562
STRING:Q14562 PhosphoSite:Q14562 DMDM:3023637 PaxDb:Q14562
PeptideAtlas:Q14562 PRIDE:Q14562 Ensembl:ENST00000262415
GeneID:1659 KEGG:hsa:1659 UCSC:uc002idu.1 CTD:1659
GeneCards:GC17P041572 HGNC:HGNC:2749 HPA:HPA049285 MIM:600396
neXtProt:NX_Q14562 PharmGKB:PA27231 InParanoid:Q14562
OrthoDB:EOG4D26P2 PhylomeDB:Q14562 EvolutionaryTrace:Q14562
GenomeRNAi:1659 NextBio:6828 ArrayExpress:Q14562 Bgee:Q14562
CleanEx:HS_DHX8 Genevestigator:Q14562 GermOnline:ENSG00000067596
Uniprot:Q14562
Length = 1220
Score = 976 (348.6 bits), Expect = 7.5e-101, Sum P(2) = 7.5e-101
Identities = 186/244 (76%), Positives = 207/244 (84%)
Query: 11 QMAEFPLEPNLSKMLIMSVHLQCSDEVLTIVSMLSVQNVFYRPXXXXXXXXXXXXXFNQM 70
+MAEFPLEP L KMLIMSVHL CS+E+LTIVSMLSVQNVFYRP F+Q
Sbjct: 979 RMAEFPLEPMLCKMLIMSVHLGCSEEMLTIVSMLSVQNVFYRPKDKQALADQKKAKFHQT 1038
Query: 71 EGDHITLLAVYNSWRNNKFSNAWCYENFVQIRTLKRAQDVRKQLLGIMDRHKLDVVSAGK 130
EGDH+TLLAVYNSW+NNKFSN WCYENF+Q R+L+RAQD+RKQ+LGIMDRHKLDVVS GK
Sbjct: 1039 EGDHLTLLAVYNSWKNNKFSNPWCYENFIQARSLRRAQDIRKQMLGIMDRHKLDVVSCGK 1098
Query: 131 NTVRVQKAVCSGFFRNAAKKDPQEGYRTLVDSQVVYIHPSSALFNRQPEWVIYHELVQTT 190
+TVRVQKA+CSGFFRNAAKKDPQEGYRTL+D QVVYIHPSSALFNRQPEWV+YHELV TT
Sbjct: 1099 STVRVQKAICSGFFRNAAKKDPQEGYRTLIDQQVVYIHPSSALFNRQPEWVVYHELVLTT 1158
Query: 191 KEYMREVTSIDPKWLVEFAPAFFKFSDPTKLSKFKKNQRLEPLQRTNRISFPPGL-LKQA 249
KEYMREVT+IDP+WLVEFAPAFFK SDPTKLSK KK QRLEPL NR P + +A
Sbjct: 1159 KEYMREVTTIDPRWLVEFAPAFFKVSDPTKLSKQKKQQRLEPLY--NRYEEPNAWRISRA 1216
Query: 250 VKKR 253
++R
Sbjct: 1217 FRRR 1220
Score = 677 (243.4 bits), Expect = 5.9e-103, Sum P(2) = 5.9e-103
Identities = 124/139 (89%), Positives = 133/139 (95%)
Query: 330 DVRKQLLGIMDRHKLDVVSAGKNTVRVQKAVCSGFFRNAAKKDPQEGYRTLVDSQVVYIH 389
D+RKQ+LGIMDRHKLDVVS GK+TVRVQKA+CSGFFRNAAKKDPQEGYRTL+D QVVYIH
Sbjct: 1077 DIRKQMLGIMDRHKLDVVSCGKSTVRVQKAICSGFFRNAAKKDPQEGYRTLIDQQVVYIH 1136
Query: 390 PSSALFNRQPEWVIYHELVQTTKEYMREVTSIDPKWLVEFAPAFFKFSDPTKLSKFKKNQ 449
PSSALFNRQPEWV+YHELV TTKEYMREVT+IDP+WLVEFAPAFFK SDPTKLSK KK Q
Sbjct: 1137 PSSALFNRQPEWVVYHELVLTTKEYMREVTTIDPRWLVEFAPAFFKVSDPTKLSKQKKQQ 1196
Query: 450 RLEPLYNKYEEPNAWRISR 468
RLEPLYN+YEEPNAWRISR
Sbjct: 1197 RLEPLYNRYEEPNAWRISR 1215
Score = 381 (139.2 bits), Expect = 5.9e-103, Sum P(2) = 5.9e-103
Identities = 74/101 (73%), Positives = 87/101 (86%)
Query: 231 EPLQRTNRISFPPGLLKQAVKKRPEIKLIVTSATLDAVKFSSYFFEAPIFTIPGRTFPVE 290
E +RT GLLK+ V+KR ++KLIVTSATLDAVKFS YF+EAPIFTIPGRT+PVE
Sbjct: 686 EAHERTIHTDVLFGLLKKTVQKRQDMKLIVTSATLDAVKFSQYFYEAPIFTIPGRTYPVE 745
Query: 291 VLYTKEPETDYLDASLITVMQIHLREPPGDVLLFLTGKLDV 331
+LYTKEPETDYLDASLITVMQIHL EPPGD+L+FLTG+ ++
Sbjct: 746 ILYTKEPETDYLDASLITVMQIHLTEPPGDILVFLTGQEEI 786
Score = 362 (132.5 bits), Expect = 4.0e-66, Sum P(2) = 4.0e-66
Identities = 71/75 (94%), Positives = 74/75 (98%)
Query: 468 REEIDTACEILYERMKSLGPDVPELIILPVYSALPSEMQTRIFEAAPPGSRKVVIATNIA 527
+EEIDTACEILYERMKSLGPDVPELIILPVYSALPSEMQTRIF+ APPGSRKVVIATNIA
Sbjct: 783 QEEIDTACEILYERMKSLGPDVPELIILPVYSALPSEMQTRIFDPAPPGSRKVVIATNIA 842
Query: 528 ETSLTIDGIFYVVDP 542
ETSLTIDGI+YVVDP
Sbjct: 843 ETSLTIDGIYYVVDP 857
Score = 44 (20.5 bits), Expect = 7.5e-101, Sum P(2) = 7.5e-101
Identities = 9/11 (81%), Positives = 10/11 (90%)
Query: 1 MDSLVVTPISQ 11
+D LVVTPISQ
Sbjct: 871 IDQLVVTPISQ 881
>UNIPROTKB|F1MEM4 [details] [associations]
symbol:DHX8 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0071013 "catalytic step 2 spliceosome" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0003723 "RNA binding"
evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR003029 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF00575 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS50126 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
GO:GO:0005524 GO:GO:0003723 Gene3D:2.40.50.140 InterPro:IPR012340
SUPFAM:SSF50249 GO:GO:0071013 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
InterPro:IPR022967 SMART:SM00316 GeneTree:ENSGT00700000104241
OMA:NAWCYEN EMBL:DAAA02049231 EMBL:DAAA02049230 IPI:IPI00695401
Ensembl:ENSBTAT00000010976 Uniprot:F1MEM4
Length = 1230
Score = 976 (348.6 bits), Expect = 7.5e-101, Sum P(2) = 7.5e-101
Identities = 186/244 (76%), Positives = 207/244 (84%)
Query: 11 QMAEFPLEPNLSKMLIMSVHLQCSDEVLTIVSMLSVQNVFYRPXXXXXXXXXXXXXFNQM 70
+MAEFPLEP L KMLIMSVHL CS+E+LTIVSMLSVQNVFYRP F+Q
Sbjct: 989 RMAEFPLEPMLCKMLIMSVHLGCSEEMLTIVSMLSVQNVFYRPKDKQALADQKKAKFHQT 1048
Query: 71 EGDHITLLAVYNSWRNNKFSNAWCYENFVQIRTLKRAQDVRKQLLGIMDRHKLDVVSAGK 130
EGDH+TLLAVYNSW+NNKFSN WCYENF+Q R+L+RAQD+RKQ+LGIMDRHKLDVVS GK
Sbjct: 1049 EGDHLTLLAVYNSWKNNKFSNPWCYENFIQARSLRRAQDIRKQMLGIMDRHKLDVVSCGK 1108
Query: 131 NTVRVQKAVCSGFFRNAAKKDPQEGYRTLVDSQVVYIHPSSALFNRQPEWVIYHELVQTT 190
+TVRVQKA+CSGFFRNAAKKDPQEGYRTL+D QVVYIHPSSALFNRQPEWV+YHELV TT
Sbjct: 1109 STVRVQKAICSGFFRNAAKKDPQEGYRTLIDQQVVYIHPSSALFNRQPEWVVYHELVLTT 1168
Query: 191 KEYMREVTSIDPKWLVEFAPAFFKFSDPTKLSKFKKNQRLEPLQRTNRISFPPGL-LKQA 249
KEYMREVT+IDP+WLVEFAPAFFK SDPTKLSK KK QRLEPL NR P + +A
Sbjct: 1169 KEYMREVTTIDPRWLVEFAPAFFKVSDPTKLSKQKKQQRLEPLY--NRYEEPNAWRISRA 1226
Query: 250 VKKR 253
++R
Sbjct: 1227 FRRR 1230
Score = 677 (243.4 bits), Expect = 6.3e-103, Sum P(2) = 6.3e-103
Identities = 124/139 (89%), Positives = 133/139 (95%)
Query: 330 DVRKQLLGIMDRHKLDVVSAGKNTVRVQKAVCSGFFRNAAKKDPQEGYRTLVDSQVVYIH 389
D+RKQ+LGIMDRHKLDVVS GK+TVRVQKA+CSGFFRNAAKKDPQEGYRTL+D QVVYIH
Sbjct: 1087 DIRKQMLGIMDRHKLDVVSCGKSTVRVQKAICSGFFRNAAKKDPQEGYRTLIDQQVVYIH 1146
Query: 390 PSSALFNRQPEWVIYHELVQTTKEYMREVTSIDPKWLVEFAPAFFKFSDPTKLSKFKKNQ 449
PSSALFNRQPEWV+YHELV TTKEYMREVT+IDP+WLVEFAPAFFK SDPTKLSK KK Q
Sbjct: 1147 PSSALFNRQPEWVVYHELVLTTKEYMREVTTIDPRWLVEFAPAFFKVSDPTKLSKQKKQQ 1206
Query: 450 RLEPLYNKYEEPNAWRISR 468
RLEPLYN+YEEPNAWRISR
Sbjct: 1207 RLEPLYNRYEEPNAWRISR 1225
Score = 381 (139.2 bits), Expect = 6.3e-103, Sum P(2) = 6.3e-103
Identities = 74/101 (73%), Positives = 87/101 (86%)
Query: 231 EPLQRTNRISFPPGLLKQAVKKRPEIKLIVTSATLDAVKFSSYFFEAPIFTIPGRTFPVE 290
E +RT GLLK+ V+KR ++KLIVTSATLDAVKFS YF+EAPIFTIPGRT+PVE
Sbjct: 696 EAHERTIHTDVLFGLLKKTVQKRQDMKLIVTSATLDAVKFSQYFYEAPIFTIPGRTYPVE 755
Query: 291 VLYTKEPETDYLDASLITVMQIHLREPPGDVLLFLTGKLDV 331
+LYTKEPETDYLDASLITVMQIHL EPPGD+L+FLTG+ ++
Sbjct: 756 ILYTKEPETDYLDASLITVMQIHLTEPPGDILVFLTGQEEI 796
Score = 362 (132.5 bits), Expect = 4.1e-66, Sum P(2) = 4.1e-66
Identities = 71/75 (94%), Positives = 74/75 (98%)
Query: 468 REEIDTACEILYERMKSLGPDVPELIILPVYSALPSEMQTRIFEAAPPGSRKVVIATNIA 527
+EEIDTACEILYERMKSLGPDVPELIILPVYSALPSEMQTRIF+ APPGSRKVVIATNIA
Sbjct: 793 QEEIDTACEILYERMKSLGPDVPELIILPVYSALPSEMQTRIFDPAPPGSRKVVIATNIA 852
Query: 528 ETSLTIDGIFYVVDP 542
ETSLTIDGI+YVVDP
Sbjct: 853 ETSLTIDGIYYVVDP 867
Score = 44 (20.5 bits), Expect = 7.5e-101, Sum P(2) = 7.5e-101
Identities = 9/11 (81%), Positives = 10/11 (90%)
Query: 1 MDSLVVTPISQ 11
+D LVVTPISQ
Sbjct: 881 IDQLVVTPISQ 891
>UNIPROTKB|D4A805 [details] [associations]
symbol:Dhx8 "Protein Dhx8" species:10116 "Rattus
norvegicus" [GO:0003723 "RNA binding" evidence=IEA] [GO:0005524
"ATP binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR003029 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF00575 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS50126 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
RGD:1310723 GO:GO:0005524 GO:GO:0003723 Gene3D:2.40.50.140
InterPro:IPR012340 SUPFAM:SSF50249 EMBL:CH473948 GO:GO:0071013
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 InterPro:IPR022967 SMART:SM00316
OMA:NAWCYEN IPI:IPI00567810 UniGene:Rn.108087
Ensembl:ENSRNOT00000028198 Uniprot:D4A805
Length = 1242
Score = 976 (348.6 bits), Expect = 7.5e-101, Sum P(2) = 7.5e-101
Identities = 186/244 (76%), Positives = 207/244 (84%)
Query: 11 QMAEFPLEPNLSKMLIMSVHLQCSDEVLTIVSMLSVQNVFYRPXXXXXXXXXXXXXFNQM 70
+MAEFPLEP L KMLIMSVHL CS+E+LTIVSMLSVQNVFYRP F+Q
Sbjct: 1001 RMAEFPLEPMLCKMLIMSVHLGCSEEMLTIVSMLSVQNVFYRPKDKQALADQKKAKFHQT 1060
Query: 71 EGDHITLLAVYNSWRNNKFSNAWCYENFVQIRTLKRAQDVRKQLLGIMDRHKLDVVSAGK 130
EGDH+TLLAVYNSW+NNKFSN WCYENF+Q R+L+RAQD+RKQ+LGIMDRHKLDVVS GK
Sbjct: 1061 EGDHLTLLAVYNSWKNNKFSNPWCYENFIQARSLRRAQDIRKQMLGIMDRHKLDVVSCGK 1120
Query: 131 NTVRVQKAVCSGFFRNAAKKDPQEGYRTLVDSQVVYIHPSSALFNRQPEWVIYHELVQTT 190
+TVRVQKA+CSGFFRNAAKKDPQEGYRTL+D QVVYIHPSSALFNRQPEWV+YHELV TT
Sbjct: 1121 STVRVQKAICSGFFRNAAKKDPQEGYRTLIDQQVVYIHPSSALFNRQPEWVVYHELVLTT 1180
Query: 191 KEYMREVTSIDPKWLVEFAPAFFKFSDPTKLSKFKKNQRLEPLQRTNRISFPPGL-LKQA 249
KEYMREVT+IDP+WLVEFAPAFFK SDPTKLSK KK QRLEPL NR P + +A
Sbjct: 1181 KEYMREVTTIDPRWLVEFAPAFFKVSDPTKLSKQKKQQRLEPLY--NRYEEPNAWRISRA 1238
Query: 250 VKKR 253
++R
Sbjct: 1239 FRRR 1242
Score = 677 (243.4 bits), Expect = 6.8e-103, Sum P(2) = 6.8e-103
Identities = 124/139 (89%), Positives = 133/139 (95%)
Query: 330 DVRKQLLGIMDRHKLDVVSAGKNTVRVQKAVCSGFFRNAAKKDPQEGYRTLVDSQVVYIH 389
D+RKQ+LGIMDRHKLDVVS GK+TVRVQKA+CSGFFRNAAKKDPQEGYRTL+D QVVYIH
Sbjct: 1099 DIRKQMLGIMDRHKLDVVSCGKSTVRVQKAICSGFFRNAAKKDPQEGYRTLIDQQVVYIH 1158
Query: 390 PSSALFNRQPEWVIYHELVQTTKEYMREVTSIDPKWLVEFAPAFFKFSDPTKLSKFKKNQ 449
PSSALFNRQPEWV+YHELV TTKEYMREVT+IDP+WLVEFAPAFFK SDPTKLSK KK Q
Sbjct: 1159 PSSALFNRQPEWVVYHELVLTTKEYMREVTTIDPRWLVEFAPAFFKVSDPTKLSKQKKQQ 1218
Query: 450 RLEPLYNKYEEPNAWRISR 468
RLEPLYN+YEEPNAWRISR
Sbjct: 1219 RLEPLYNRYEEPNAWRISR 1237
Score = 381 (139.2 bits), Expect = 6.8e-103, Sum P(2) = 6.8e-103
Identities = 74/101 (73%), Positives = 87/101 (86%)
Query: 231 EPLQRTNRISFPPGLLKQAVKKRPEIKLIVTSATLDAVKFSSYFFEAPIFTIPGRTFPVE 290
E +RT GLLK+ V+KR ++KLIVTSATLDAVKFS YF+EAPIFTIPGRT+PVE
Sbjct: 708 EAHERTIHTDVLFGLLKKTVQKRQDMKLIVTSATLDAVKFSQYFYEAPIFTIPGRTYPVE 767
Query: 291 VLYTKEPETDYLDASLITVMQIHLREPPGDVLLFLTGKLDV 331
+LYTKEPETDYLDASLITVMQIHL EPPGD+L+FLTG+ ++
Sbjct: 768 ILYTKEPETDYLDASLITVMQIHLTEPPGDILVFLTGQEEI 808
Score = 362 (132.5 bits), Expect = 4.3e-66, Sum P(2) = 4.3e-66
Identities = 71/75 (94%), Positives = 74/75 (98%)
Query: 468 REEIDTACEILYERMKSLGPDVPELIILPVYSALPSEMQTRIFEAAPPGSRKVVIATNIA 527
+EEIDTACEILYERMKSLGPDVPELIILPVYSALPSEMQTRIF+ APPGSRKVVIATNIA
Sbjct: 805 QEEIDTACEILYERMKSLGPDVPELIILPVYSALPSEMQTRIFDPAPPGSRKVVIATNIA 864
Query: 528 ETSLTIDGIFYVVDP 542
ETSLTIDGI+YVVDP
Sbjct: 865 ETSLTIDGIYYVVDP 879
Score = 44 (20.5 bits), Expect = 7.5e-101, Sum P(2) = 7.5e-101
Identities = 9/11 (81%), Positives = 10/11 (90%)
Query: 1 MDSLVVTPISQ 11
+D LVVTPISQ
Sbjct: 893 IDQLVVTPISQ 903
>MGI|MGI:1306823 [details] [associations]
symbol:Dhx8 "DEAH (Asp-Glu-Ala-His) box polypeptide 8"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0003723 "RNA binding" evidence=IEA] [GO:0004386 "helicase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0005681 "spliceosomal
complex" evidence=IEA] [GO:0006397 "mRNA processing" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0008380 "RNA splicing" evidence=IEA] [GO:0016787 "hydrolase
activity" evidence=IEA] [GO:0071013 "catalytic step 2 spliceosome"
evidence=ISO] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR003029 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF00575 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS50126 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
MGI:MGI:1306823 GO:GO:0005524 GO:GO:0008380 GO:GO:0006397
GO:GO:0003723 Gene3D:2.40.50.140 InterPro:IPR012340 SUPFAM:SSF50249
GO:GO:0071013 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
EMBL:AL590994 eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 InterPro:IPR022967 SMART:SM00316 HOVERGEN:HBG039428
GeneTree:ENSGT00700000104241 KO:K12818 OMA:NAWCYEN CTD:1659
OrthoDB:EOG4D26P2 EMBL:BC132445 EMBL:AL591436 IPI:IPI00461304
RefSeq:NP_659080.2 UniGene:Mm.28186 ProteinModelPortal:A2A4P0
SMR:A2A4P0 PaxDb:A2A4P0 PRIDE:A2A4P0 DNASU:217207
Ensembl:ENSMUST00000039152 GeneID:217207 KEGG:mmu:217207
UCSC:uc007lpr.1 InParanoid:A2A4P0 NextBio:375641 Bgee:A2A4P0
Genevestigator:A2A4P0 Uniprot:A2A4P0
Length = 1244
Score = 976 (348.6 bits), Expect = 7.5e-101, Sum P(2) = 7.5e-101
Identities = 186/244 (76%), Positives = 207/244 (84%)
Query: 11 QMAEFPLEPNLSKMLIMSVHLQCSDEVLTIVSMLSVQNVFYRPXXXXXXXXXXXXXFNQM 70
+MAEFPLEP L KMLIMSVHL CS+E+LTIVSMLSVQNVFYRP F+Q
Sbjct: 1003 RMAEFPLEPMLCKMLIMSVHLGCSEEMLTIVSMLSVQNVFYRPKDKQALADQKKAKFHQT 1062
Query: 71 EGDHITLLAVYNSWRNNKFSNAWCYENFVQIRTLKRAQDVRKQLLGIMDRHKLDVVSAGK 130
EGDH+TLLAVYNSW+NNKFSN WCYENF+Q R+L+RAQD+RKQ+LGIMDRHKLDVVS GK
Sbjct: 1063 EGDHLTLLAVYNSWKNNKFSNPWCYENFIQARSLRRAQDIRKQMLGIMDRHKLDVVSCGK 1122
Query: 131 NTVRVQKAVCSGFFRNAAKKDPQEGYRTLVDSQVVYIHPSSALFNRQPEWVIYHELVQTT 190
+TVRVQKA+CSGFFRNAAKKDPQEGYRTL+D QVVYIHPSSALFNRQPEWV+YHELV TT
Sbjct: 1123 STVRVQKAICSGFFRNAAKKDPQEGYRTLIDQQVVYIHPSSALFNRQPEWVVYHELVLTT 1182
Query: 191 KEYMREVTSIDPKWLVEFAPAFFKFSDPTKLSKFKKNQRLEPLQRTNRISFPPGL-LKQA 249
KEYMREVT+IDP+WLVEFAPAFFK SDPTKLSK KK QRLEPL NR P + +A
Sbjct: 1183 KEYMREVTTIDPRWLVEFAPAFFKVSDPTKLSKQKKQQRLEPLY--NRYEEPNAWRISRA 1240
Query: 250 VKKR 253
++R
Sbjct: 1241 FRRR 1244
Score = 677 (243.4 bits), Expect = 6.9e-103, Sum P(2) = 6.9e-103
Identities = 124/139 (89%), Positives = 133/139 (95%)
Query: 330 DVRKQLLGIMDRHKLDVVSAGKNTVRVQKAVCSGFFRNAAKKDPQEGYRTLVDSQVVYIH 389
D+RKQ+LGIMDRHKLDVVS GK+TVRVQKA+CSGFFRNAAKKDPQEGYRTL+D QVVYIH
Sbjct: 1101 DIRKQMLGIMDRHKLDVVSCGKSTVRVQKAICSGFFRNAAKKDPQEGYRTLIDQQVVYIH 1160
Query: 390 PSSALFNRQPEWVIYHELVQTTKEYMREVTSIDPKWLVEFAPAFFKFSDPTKLSKFKKNQ 449
PSSALFNRQPEWV+YHELV TTKEYMREVT+IDP+WLVEFAPAFFK SDPTKLSK KK Q
Sbjct: 1161 PSSALFNRQPEWVVYHELVLTTKEYMREVTTIDPRWLVEFAPAFFKVSDPTKLSKQKKQQ 1220
Query: 450 RLEPLYNKYEEPNAWRISR 468
RLEPLYN+YEEPNAWRISR
Sbjct: 1221 RLEPLYNRYEEPNAWRISR 1239
Score = 381 (139.2 bits), Expect = 6.9e-103, Sum P(2) = 6.9e-103
Identities = 74/101 (73%), Positives = 87/101 (86%)
Query: 231 EPLQRTNRISFPPGLLKQAVKKRPEIKLIVTSATLDAVKFSSYFFEAPIFTIPGRTFPVE 290
E +RT GLLK+ V+KR ++KLIVTSATLDAVKFS YF+EAPIFTIPGRT+PVE
Sbjct: 710 EAHERTIHTDVLFGLLKKTVQKRQDMKLIVTSATLDAVKFSQYFYEAPIFTIPGRTYPVE 769
Query: 291 VLYTKEPETDYLDASLITVMQIHLREPPGDVLLFLTGKLDV 331
+LYTKEPETDYLDASLITVMQIHL EPPGD+L+FLTG+ ++
Sbjct: 770 ILYTKEPETDYLDASLITVMQIHLTEPPGDILVFLTGQEEI 810
Score = 362 (132.5 bits), Expect = 4.3e-66, Sum P(2) = 4.3e-66
Identities = 71/75 (94%), Positives = 74/75 (98%)
Query: 468 REEIDTACEILYERMKSLGPDVPELIILPVYSALPSEMQTRIFEAAPPGSRKVVIATNIA 527
+EEIDTACEILYERMKSLGPDVPELIILPVYSALPSEMQTRIF+ APPGSRKVVIATNIA
Sbjct: 807 QEEIDTACEILYERMKSLGPDVPELIILPVYSALPSEMQTRIFDPAPPGSRKVVIATNIA 866
Query: 528 ETSLTIDGIFYVVDP 542
ETSLTIDGI+YVVDP
Sbjct: 867 ETSLTIDGIYYVVDP 881
Score = 44 (20.5 bits), Expect = 7.5e-101, Sum P(2) = 7.5e-101
Identities = 9/11 (81%), Positives = 10/11 (90%)
Query: 1 MDSLVVTPISQ 11
+D LVVTPISQ
Sbjct: 895 IDQLVVTPISQ 905
>UNIPROTKB|F1P306 [details] [associations]
symbol:LOC100858239 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0003723 "RNA binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR003029 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF00575 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS50126 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
GO:GO:0005524 GO:GO:0003723 Gene3D:2.40.50.140 InterPro:IPR012340
SUPFAM:SSF50249 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026 InterPro:IPR022967
SMART:SM00316 GeneTree:ENSGT00700000104241 EMBL:AADN02070153
EMBL:AADN02070154 IPI:IPI00591627 Ensembl:ENSGALT00000001801
OMA:AMANTAM Uniprot:F1P306
Length = 1168
Score = 973 (347.6 bits), Expect = 1.6e-100, Sum P(2) = 1.6e-100
Identities = 186/244 (76%), Positives = 206/244 (84%)
Query: 11 QMAEFPLEPNLSKMLIMSVHLQCSDEVLTIVSMLSVQNVFYRPXXXXXXXXXXXXXFNQM 70
+MAEFPLEP L KMLIMSVHL CS+E+LTIVSMLSVQNVFYRP F+Q
Sbjct: 927 RMAEFPLEPMLCKMLIMSVHLGCSEEMLTIVSMLSVQNVFYRPKDKQALADQKKAKFHQT 986
Query: 71 EGDHITLLAVYNSWRNNKFSNAWCYENFVQIRTLKRAQDVRKQLLGIMDRHKLDVVSAGK 130
EGDH+TLLAVYNSW+NNKFSN WCYENF+Q R+L+RAQD+RKQ+LGIMDRHKLDVVS GK
Sbjct: 987 EGDHLTLLAVYNSWKNNKFSNPWCYENFIQARSLRRAQDIRKQMLGIMDRHKLDVVSCGK 1046
Query: 131 NTVRVQKAVCSGFFRNAAKKDPQEGYRTLVDSQVVYIHPSSALFNRQPEWVIYHELVQTT 190
TVRVQKA+CSGFFRNAAKKDPQEGYRTL+D QVVYIHPSSALFNRQPEWV+YHELV TT
Sbjct: 1047 ATVRVQKAICSGFFRNAAKKDPQEGYRTLIDQQVVYIHPSSALFNRQPEWVVYHELVLTT 1106
Query: 191 KEYMREVTSIDPKWLVEFAPAFFKFSDPTKLSKFKKNQRLEPLQRTNRISFPPGL-LKQA 249
KEYMREVT+IDP+WLVEFAPAFFK SDPTKLSK KK QRLEPL NR P + +A
Sbjct: 1107 KEYMREVTTIDPRWLVEFAPAFFKVSDPTKLSKQKKQQRLEPLY--NRYEEPNAWRISRA 1164
Query: 250 VKKR 253
++R
Sbjct: 1165 FRRR 1168
Score = 674 (242.3 bits), Expect = 8.7e-103, Sum P(2) = 8.7e-103
Identities = 124/139 (89%), Positives = 132/139 (94%)
Query: 330 DVRKQLLGIMDRHKLDVVSAGKNTVRVQKAVCSGFFRNAAKKDPQEGYRTLVDSQVVYIH 389
D+RKQ+LGIMDRHKLDVVS GK TVRVQKA+CSGFFRNAAKKDPQEGYRTL+D QVVYIH
Sbjct: 1025 DIRKQMLGIMDRHKLDVVSCGKATVRVQKAICSGFFRNAAKKDPQEGYRTLIDQQVVYIH 1084
Query: 390 PSSALFNRQPEWVIYHELVQTTKEYMREVTSIDPKWLVEFAPAFFKFSDPTKLSKFKKNQ 449
PSSALFNRQPEWV+YHELV TTKEYMREVT+IDP+WLVEFAPAFFK SDPTKLSK KK Q
Sbjct: 1085 PSSALFNRQPEWVVYHELVLTTKEYMREVTTIDPRWLVEFAPAFFKVSDPTKLSKQKKQQ 1144
Query: 450 RLEPLYNKYEEPNAWRISR 468
RLEPLYN+YEEPNAWRISR
Sbjct: 1145 RLEPLYNRYEEPNAWRISR 1163
Score = 381 (139.2 bits), Expect = 8.7e-103, Sum P(2) = 8.7e-103
Identities = 74/101 (73%), Positives = 87/101 (86%)
Query: 231 EPLQRTNRISFPPGLLKQAVKKRPEIKLIVTSATLDAVKFSSYFFEAPIFTIPGRTFPVE 290
E +RT GLLK+ V+KR ++KLIVTSATLDAVKFS YF+EAPIFTIPGRT+PVE
Sbjct: 634 EAHERTIHTDVLFGLLKKTVQKRQDMKLIVTSATLDAVKFSQYFYEAPIFTIPGRTYPVE 693
Query: 291 VLYTKEPETDYLDASLITVMQIHLREPPGDVLLFLTGKLDV 331
+LYTKEPETDYLDASLITVMQIHL EPPGD+L+FLTG+ ++
Sbjct: 694 ILYTKEPETDYLDASLITVMQIHLTEPPGDILVFLTGQEEI 734
Score = 362 (132.5 bits), Expect = 3.4e-66, Sum P(2) = 3.4e-66
Identities = 71/75 (94%), Positives = 74/75 (98%)
Query: 468 REEIDTACEILYERMKSLGPDVPELIILPVYSALPSEMQTRIFEAAPPGSRKVVIATNIA 527
+EEIDTACEILYERMKSLGPDVPELIILPVYSALPSEMQTRIF+ APPGSRKVVIATNIA
Sbjct: 731 QEEIDTACEILYERMKSLGPDVPELIILPVYSALPSEMQTRIFDPAPPGSRKVVIATNIA 790
Query: 528 ETSLTIDGIFYVVDP 542
ETSLTIDGI+YVVDP
Sbjct: 791 ETSLTIDGIYYVVDP 805
Score = 44 (20.5 bits), Expect = 1.6e-100, Sum P(2) = 1.6e-100
Identities = 9/11 (81%), Positives = 10/11 (90%)
Query: 1 MDSLVVTPISQ 11
+D LVVTPISQ
Sbjct: 819 IDQLVVTPISQ 829
>ZFIN|ZDB-GENE-050809-39 [details] [associations]
symbol:dhx8 "DEAH (Asp-Glu-Ala-His) box polypeptide
8" species:7955 "Danio rerio" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0003723 "RNA binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0051301 "cell division" evidence=IMP] [GO:0060215
"primitive hemopoiesis" evidence=IMP] [GO:0005634 "nucleus"
evidence=IDA] [GO:0070054 "mRNA splicing, via endonucleolytic
cleavage and ligation" evidence=IMP] [GO:0016787 "hydrolase
activity" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR003029 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF00575 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS50126 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
ZFIN:ZDB-GENE-050809-39 GO:GO:0005524 GO:GO:0005634 GO:GO:0051301
GO:GO:0003723 Gene3D:2.40.50.140 InterPro:IPR012340 SUPFAM:SSF50249
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 InterPro:IPR022967 SMART:SM00316
GeneTree:ENSGT00700000104241 KO:K12818 OMA:NAWCYEN CTD:1659
GO:GO:0060215 InterPro:IPR013957 Pfam:PF08648 EMBL:AL833789
IPI:IPI00498887 RefSeq:XP_002663993.1 UniGene:Dr.159472
ProteinModelPortal:E7F7E3 Ensembl:ENSDART00000066282 GeneID:606595
KEGG:dre:606595 NextBio:20892459 Bgee:E7F7E3 GO:GO:0070054
Uniprot:E7F7E3
Length = 1210
Score = 969 (346.2 bits), Expect = 4.1e-100, Sum P(2) = 4.1e-100
Identities = 185/244 (75%), Positives = 206/244 (84%)
Query: 11 QMAEFPLEPNLSKMLIMSVHLQCSDEVLTIVSMLSVQNVFYRPXXXXXXXXXXXXXFNQM 70
+MAEFPLEP L KMLIMSVHL CS+E+LTIVSMLSVQNVFYRP F+Q
Sbjct: 969 RMAEFPLEPMLCKMLIMSVHLGCSEEMLTIVSMLSVQNVFYRPKDKQALADQKKAKFHQP 1028
Query: 71 EGDHITLLAVYNSWRNNKFSNAWCYENFVQIRTLKRAQDVRKQLLGIMDRHKLDVVSAGK 130
EGDH+TLLAVYNSW+NNKFSN WCYENF+Q R+L+RAQD+RKQ+LGIMDRHKLDVVS GK
Sbjct: 1029 EGDHLTLLAVYNSWKNNKFSNPWCYENFIQARSLRRAQDIRKQMLGIMDRHKLDVVSCGK 1088
Query: 131 NTVRVQKAVCSGFFRNAAKKDPQEGYRTLVDSQVVYIHPSSALFNRQPEWVIYHELVQTT 190
TVRVQKA+CSGFFRNAAKKDPQEGYRTL+D QVVYIHPSSALFNRQPEWV+YHELV TT
Sbjct: 1089 ATVRVQKAICSGFFRNAAKKDPQEGYRTLIDQQVVYIHPSSALFNRQPEWVVYHELVLTT 1148
Query: 191 KEYMREVTSIDPKWLVEFAPAFFKFSDPTKLSKFKKNQRLEPLQRTNRISFPPGL-LKQA 249
KEYMREVT+IDP+WLVEFAPAFFK SDPT+LSK KK QRLEPL NR P + +A
Sbjct: 1149 KEYMREVTTIDPRWLVEFAPAFFKVSDPTRLSKQKKQQRLEPLY--NRYEEPNAWRISRA 1206
Query: 250 VKKR 253
++R
Sbjct: 1207 FRRR 1210
Score = 671 (241.3 bits), Expect = 2.0e-102, Sum P(2) = 2.0e-102
Identities = 123/139 (88%), Positives = 132/139 (94%)
Query: 330 DVRKQLLGIMDRHKLDVVSAGKNTVRVQKAVCSGFFRNAAKKDPQEGYRTLVDSQVVYIH 389
D+RKQ+LGIMDRHKLDVVS GK TVRVQKA+CSGFFRNAAKKDPQEGYRTL+D QVVYIH
Sbjct: 1067 DIRKQMLGIMDRHKLDVVSCGKATVRVQKAICSGFFRNAAKKDPQEGYRTLIDQQVVYIH 1126
Query: 390 PSSALFNRQPEWVIYHELVQTTKEYMREVTSIDPKWLVEFAPAFFKFSDPTKLSKFKKNQ 449
PSSALFNRQPEWV+YHELV TTKEYMREVT+IDP+WLVEFAPAFFK SDPT+LSK KK Q
Sbjct: 1127 PSSALFNRQPEWVVYHELVLTTKEYMREVTTIDPRWLVEFAPAFFKVSDPTRLSKQKKQQ 1186
Query: 450 RLEPLYNKYEEPNAWRISR 468
RLEPLYN+YEEPNAWRISR
Sbjct: 1187 RLEPLYNRYEEPNAWRISR 1205
Score = 382 (139.5 bits), Expect = 2.0e-102, Sum P(2) = 2.0e-102
Identities = 75/101 (74%), Positives = 87/101 (86%)
Query: 231 EPLQRTNRISFPPGLLKQAVKKRPEIKLIVTSATLDAVKFSSYFFEAPIFTIPGRTFPVE 290
E +RT GLLK+ V+KR ++KLIVTSATLDAVKFS YF+EAPIFTIPGRT+PVE
Sbjct: 676 EAHERTIHTDVLFGLLKKTVQKRTDMKLIVTSATLDAVKFSQYFYEAPIFTIPGRTYPVE 735
Query: 291 VLYTKEPETDYLDASLITVMQIHLREPPGDVLLFLTGKLDV 331
VLYTKEPETDYLDASLITVMQIHL EPPGD+L+FLTG+ ++
Sbjct: 736 VLYTKEPETDYLDASLITVMQIHLTEPPGDILVFLTGQEEI 776
Score = 362 (132.5 bits), Expect = 2.8e-66, Sum P(2) = 2.8e-66
Identities = 71/75 (94%), Positives = 74/75 (98%)
Query: 468 REEIDTACEILYERMKSLGPDVPELIILPVYSALPSEMQTRIFEAAPPGSRKVVIATNIA 527
+EEIDTACEILYERMKSLGPDVPELIILPVYSALPSEMQTRIF+ APPGSRKVVIATNIA
Sbjct: 773 QEEIDTACEILYERMKSLGPDVPELIILPVYSALPSEMQTRIFDPAPPGSRKVVIATNIA 832
Query: 528 ETSLTIDGIFYVVDP 542
ETSLTIDGI+YVVDP
Sbjct: 833 ETSLTIDGIYYVVDP 847
Score = 44 (20.5 bits), Expect = 4.1e-100, Sum P(2) = 4.1e-100
Identities = 9/11 (81%), Positives = 10/11 (90%)
Query: 1 MDSLVVTPISQ 11
+D LVVTPISQ
Sbjct: 861 IDQLVVTPISQ 871
>RGD|1310723 [details] [associations]
symbol:Dhx8 "DEAH (Asp-Glu-Ala-His) box polypeptide 8"
species:10116 "Rattus norvegicus" [GO:0003723 "RNA binding"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=ISO] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0071013 "catalytic step 2 spliceosome"
evidence=IEA;ISO] [GO:0005730 "nucleolus" evidence=ISO]
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR003029
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF00575 Pfam:PF04408 PROSITE:PS00690 PROSITE:PS50126
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 RGD:1310723
GO:GO:0005524 GO:GO:0003723 Gene3D:2.40.50.140 InterPro:IPR012340
SUPFAM:SSF50249 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
HOGENOM:HOG000175261 InterPro:IPR022967 SMART:SM00316
HOVERGEN:HBG039428 GeneTree:ENSGT00700000104241 KO:K12818 CTD:1659
OrthoDB:EOG4D26P2 UniGene:Rn.108087 EMBL:AY383690 IPI:IPI00370026
RefSeq:NP_001041309.1 SMR:Q6TXG4 Ensembl:ENSRNOT00000048140
GeneID:287727 KEGG:rno:287727 UCSC:RGD:1310723 NextBio:626887
Genevestigator:Q6TXG4 Uniprot:Q6TXG4
Length = 1210
Score = 972 (347.2 bits), Expect = 2.0e-100, Sum P(2) = 2.0e-100
Identities = 181/223 (81%), Positives = 198/223 (88%)
Query: 11 QMAEFPLEPNLSKMLIMSVHLQCSDEVLTIVSMLSVQNVFYRPXXXXXXXXXXXXXFNQM 70
+MAEFPLEP L KMLIMSVHL CS+E+LTIVSMLSVQNVFYRP F+Q
Sbjct: 948 RMAEFPLEPMLCKMLIMSVHLGCSEEMLTIVSMLSVQNVFYRPKDKQALADQKKAKFHQT 1007
Query: 71 EGDHITLLAVYNSWRNNKFSNAWCYENFVQIRTLKRAQDVRKQLLGIMDRHKLDVVSAGK 130
EGDH+TLLAVYNSW+NNKFSN WCYENF+Q R+L+RAQD+RKQ+LGIMDRHKLDVVS GK
Sbjct: 1008 EGDHLTLLAVYNSWKNNKFSNPWCYENFIQARSLRRAQDIRKQMLGIMDRHKLDVVSCGK 1067
Query: 131 NTVRVQKAVCSGFFRNAAKKDPQEGYRTLVDSQVVYIHPSSALFNRQPEWVIYHELVQTT 190
+TVRVQKA+CSGFFRNAAKKDPQEGYRTL+D QVVYIHPSSALFNRQPEWV+YHELV TT
Sbjct: 1068 STVRVQKAICSGFFRNAAKKDPQEGYRTLIDQQVVYIHPSSALFNRQPEWVVYHELVLTT 1127
Query: 191 KEYMREVTSIDPKWLVEFAPAFFKFSDPTKLSKFKKNQRLEPL 233
KEYMREVT+IDP+WLVEFAPAFFK SDPTKLSK KK QRLEPL
Sbjct: 1128 KEYMREVTTIDPRWLVEFAPAFFKVSDPTKLSKQKKQQRLEPL 1170
Score = 616 (221.9 bits), Expect = 2.5e-96, Sum P(2) = 2.5e-96
Identities = 114/130 (87%), Positives = 123/130 (94%)
Query: 330 DVRKQLLGIMDRHKLDVVSAGKNTVRVQKAVCSGFFRNAAKKDPQEGYRTLVDSQVVYIH 389
D+RKQ+LGIMDRHKLDVVS GK+TVRVQKA+CSGFFRNAAKKDPQEGYRTL+D QVVYIH
Sbjct: 1046 DIRKQMLGIMDRHKLDVVSCGKSTVRVQKAICSGFFRNAAKKDPQEGYRTLIDQQVVYIH 1105
Query: 390 PSSALFNRQPEWVIYHELVQTTKEYMREVTSIDPKWLVEFAPAFFKFSDPTKLSKFKKNQ 449
PSSALFNRQPEWV+YHELV TTKEYMREVT+IDP+WLVEFAPAFFK SDPTKLSK KK Q
Sbjct: 1106 PSSALFNRQPEWVVYHELVLTTKEYMREVTTIDPRWLVEFAPAFFKVSDPTKLSKQKKQQ 1165
Query: 450 RLEPLYNKYE 459
RLEPLYN+ E
Sbjct: 1166 RLEPLYNRGE 1175
Score = 381 (139.2 bits), Expect = 2.5e-96, Sum P(2) = 2.5e-96
Identities = 74/101 (73%), Positives = 87/101 (86%)
Query: 231 EPLQRTNRISFPPGLLKQAVKKRPEIKLIVTSATLDAVKFSSYFFEAPIFTIPGRTFPVE 290
E +RT GLLK+ V+KR ++KLIVTSATLDAVKFS YF+EAPIFTIPGRT+PVE
Sbjct: 655 EAHERTIHTDVLFGLLKKTVQKRQDMKLIVTSATLDAVKFSQYFYEAPIFTIPGRTYPVE 714
Query: 291 VLYTKEPETDYLDASLITVMQIHLREPPGDVLLFLTGKLDV 331
+LYTKEPETDYLDASLITVMQIHL EPPGD+L+FLTG+ ++
Sbjct: 715 ILYTKEPETDYLDASLITVMQIHLTEPPGDILVFLTGQEEI 755
Score = 362 (132.5 bits), Expect = 3.9e-66, Sum P(2) = 3.9e-66
Identities = 71/75 (94%), Positives = 74/75 (98%)
Query: 468 REEIDTACEILYERMKSLGPDVPELIILPVYSALPSEMQTRIFEAAPPGSRKVVIATNIA 527
+EEIDTACEILYERMKSLGPDVPELIILPVYSALPSEMQTRIF+ APPGSRKVVIATNIA
Sbjct: 752 QEEIDTACEILYERMKSLGPDVPELIILPVYSALPSEMQTRIFDPAPPGSRKVVIATNIA 811
Query: 528 ETSLTIDGIFYVVDP 542
ETSLTIDGI+YVVDP
Sbjct: 812 ETSLTIDGIYYVVDP 826
Score = 44 (20.5 bits), Expect = 2.0e-100, Sum P(2) = 2.0e-100
Identities = 9/11 (81%), Positives = 10/11 (90%)
Query: 1 MDSLVVTPISQ 11
+D LVVTPISQ
Sbjct: 840 IDQLVVTPISQ 850
>WB|WBGene00003393 [details] [associations]
symbol:mog-5 species:6239 "Caenorhabditis elegans"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA] [GO:0009792
"embryo development ending in birth or egg hatching" evidence=IMP]
[GO:0000003 "reproduction" evidence=IMP] [GO:0040011 "locomotion"
evidence=IMP] [GO:0018996 "molting cycle, collagen and
cuticulin-based cuticle" evidence=IMP] [GO:0002009 "morphogenesis
of an epithelium" evidence=IMP] [GO:0040007 "growth" evidence=IMP]
[GO:0002119 "nematode larval development" evidence=IMP] [GO:0042127
"regulation of cell proliferation" evidence=IMP] [GO:0040020
"regulation of meiosis" evidence=IMP] [GO:0007281 "germ cell
development" evidence=IMP] [GO:0006915 "apoptotic process"
evidence=IMP] [GO:0048589 "developmental growth" evidence=IMP]
[GO:0010172 "embryonic body morphogenesis" evidence=IMP]
[GO:0040022 "feminization of hermaphroditic germ-line"
evidence=IMP] [GO:0005515 "protein binding" evidence=IPI]
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR003029
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF00575 Pfam:PF04408 PROSITE:PS00690 PROSITE:PS50126
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0005634 GO:GO:0009792 GO:GO:0002009 GO:GO:0006915
GO:GO:0002119 GO:GO:0008380 GO:GO:0018996 GO:GO:0006397
GO:GO:0040011 GO:GO:0003723 GO:GO:0042127 GO:GO:0007281
GO:GO:0048589 Gene3D:2.40.50.140 InterPro:IPR012340 SUPFAM:SSF50249
GO:GO:0010172 GO:GO:0040020 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
GO:GO:0040022 GO:GO:0008026 EMBL:FO081042 HOGENOM:HOG000175261
InterPro:IPR022967 SMART:SM00316 GeneTree:ENSGT00700000104241
KO:K12818 OMA:NAWCYEN EMBL:AF286899 PIR:T15921 RefSeq:NP_495019.1
UniGene:Cel.7556 ProteinModelPortal:Q09530 SMR:Q09530
DIP:DIP-25759N IntAct:Q09530 MINT:MINT-1046882 STRING:Q09530
PaxDb:Q09530 EnsemblMetazoa:EEED8.5 GeneID:173920
KEGG:cel:CELE_EEED8.5 UCSC:EEED8.5 CTD:173920 WormBase:EEED8.5
InParanoid:Q09530 NextBio:881669 Uniprot:Q09530
Length = 1200
Score = 884 (316.2 bits), Expect = 2.7e-92, Sum P(2) = 2.7e-92
Identities = 162/232 (69%), Positives = 193/232 (83%)
Query: 2 DSLVVTPISQMAEFPLEPNLSKMLIMSVHLQCSDEVLTIVSMLSVQNVFYRPXXXXXXXX 61
D L+ +MAEFPLEP+LSK+LIMSV L CS+EVLTIV+ML+VQN+FYRP
Sbjct: 945 DGLLTKLGRRMAEFPLEPSLSKLLIMSVDLGCSEEVLTIVAMLNVQNIFYRPKEKQDHAD 1004
Query: 62 XXXXXFNQMEGDHITLLAVYNSWRNNKFSNAWCYENFVQIRTLKRAQDVRKQLLGIMDRH 121
F+Q EGDH+TLLAVYNSW+N+ FS WC+ENF+Q+R++KRAQD+RKQLLGIMDRH
Sbjct: 1005 QKKAKFHQPEGDHLTLLAVYNSWKNHHFSQPWCFENFIQVRSMKRAQDIRKQLLGIMDRH 1064
Query: 122 KLDVVSAGKNTVRVQKAVCSGFFRNAAKKDPQEGYRTLVDSQVVYIHPSSALFNRQPEWV 181
KL +VS G++ RVQKA+CSGFFRNAAK+DPQEGYRTL D Q VYIHPSSA F +QPEWV
Sbjct: 1065 KLLMVSCGRDVSRVQKAICSGFFRNAAKRDPQEGYRTLTDGQNVYIHPSSACFQQQPEWV 1124
Query: 182 IYHELVQTTKEYMREVTSIDPKWLVEFAPAFFKFSDPTKLSKFKKNQRLEPL 233
+YHELV TTKEYMREVT+IDPKWLVEFAP+FFK D TKLS FK+NQ+++PL
Sbjct: 1125 VYHELVMTTKEYMREVTAIDPKWLVEFAPSFFKIGDSTKLSTFKRNQKIDPL 1176
Score = 587 (211.7 bits), Expect = 9.2e-94, Sum P(3) = 9.2e-94
Identities = 105/139 (75%), Positives = 123/139 (88%)
Query: 330 DVRKQLLGIMDRHKLDVVSAGKNTVRVQKAVCSGFFRNAAKKDPQEGYRTLVDSQVVYIH 389
D+RKQLLGIMDRHKL +VS G++ RVQKA+CSGFFRNAAK+DPQEGYRTL D Q VYIH
Sbjct: 1052 DIRKQLLGIMDRHKLLMVSCGRDVSRVQKAICSGFFRNAAKRDPQEGYRTLTDGQNVYIH 1111
Query: 390 PSSALFNRQPEWVIYHELVQTTKEYMREVTSIDPKWLVEFAPAFFKFSDPTKLSKFKKNQ 449
PSSA F +QPEWV+YHELV TTKEYMREVT+IDPKWLVEFAP+FFK D TKLS FK+NQ
Sbjct: 1112 PSSACFQQQPEWVVYHELVMTTKEYMREVTAIDPKWLVEFAPSFFKIGDSTKLSTFKRNQ 1171
Query: 450 RLEPLYNKYEEPNAWRISR 468
+++PL++KY + NAWRI+R
Sbjct: 1172 KIDPLFDKYADANAWRITR 1190
Score = 370 (135.3 bits), Expect = 9.2e-94, Sum P(3) = 9.2e-94
Identities = 77/127 (60%), Positives = 94/127 (74%)
Query: 217 DPTKLSKFKKNQRLEPLQRTNRISFPPGLLKQAVKKRPEIKLIVTSATLDAVKFSSYFFE 276
DP LS + E +RT GLLK A +KRPE+KLI+TSATLD+VKFS YF E
Sbjct: 648 DPD-LSGYSLIMLDEAHERTIHTDVLFGLLKAAARKRPELKLIITSATLDSVKFSEYFLE 706
Query: 277 APIFTIPGRTFPVEVLYTKEPETDYLDASLITVMQIHLREPPGDVLLFLTGKLDVRKQLL 336
APIFTIPGRTFPVE+LYT+EPE+DYL+A+ ITVMQIHL EPPGDVL+FLTG+ ++
Sbjct: 707 APIFTIPGRTFPVEILYTREPESDYLEAAHITVMQIHLTEPPGDVLVFLTGQEEIDTSCE 766
Query: 337 GIMDRHK 343
+ +R K
Sbjct: 767 VLYERMK 773
Score = 343 (125.8 bits), Expect = 1.3e-62, Sum P(3) = 1.3e-62
Identities = 66/75 (88%), Positives = 71/75 (94%)
Query: 468 REEIDTACEILYERMKSLGPDVPELIILPVYSALPSEMQTRIFEAAPPGSRKVVIATNIA 527
+EEIDT+CE+LYERMKS+GPDVPELIILPVY ALPSEMQTRIF+ AP G RKVVIATNIA
Sbjct: 758 QEEIDTSCEVLYERMKSMGPDVPELIILPVYGALPSEMQTRIFDPAPAGKRKVVIATNIA 817
Query: 528 ETSLTIDGIFYVVDP 542
ETSLTIDGIFYVVDP
Sbjct: 818 ETSLTIDGIFYVVDP 832
Score = 55 (24.4 bits), Expect = 2.7e-92, Sum P(2) = 2.7e-92
Identities = 12/13 (92%), Positives = 12/13 (92%)
Query: 1 MDSLVVTPISQMA 13
MDSLVVTPISQ A
Sbjct: 846 MDSLVVTPISQAA 858
Score = 40 (19.1 bits), Expect = 9.2e-94, Sum P(3) = 9.2e-94
Identities = 11/39 (28%), Positives = 19/39 (48%)
Query: 117 IMDRHKLDVVSAGKNTVRVQKAVCSGFFRNAAK-KDPQE 154
I D HK+ ++S K ++ + + N AK K+ E
Sbjct: 90 IKDSHKITLISDAKEEIKARLPALA--MANTAKEKEDNE 126
Score = 40 (19.1 bits), Expect = 2.4e-27, Sum P(2) = 2.4e-27
Identities = 11/39 (28%), Positives = 19/39 (48%)
Query: 338 IMDRHKLDVVSAGKNTVRVQKAVCSGFFRNAAK-KDPQE 375
I D HK+ ++S K ++ + + N AK K+ E
Sbjct: 90 IKDSHKITLISDAKEEIKARLPALA--MANTAKEKEDNE 126
>UNIPROTKB|Q09530 [details] [associations]
symbol:mog-5 "Probable pre-mRNA-splicing factor
ATP-dependent RNA helicase mog-5" species:6239 "Caenorhabditis
elegans" [GO:0005515 "protein binding" evidence=IPI]
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR003029
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF00575 Pfam:PF04408 PROSITE:PS00690 PROSITE:PS50126
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0005634 GO:GO:0009792 GO:GO:0002009 GO:GO:0006915
GO:GO:0002119 GO:GO:0008380 GO:GO:0018996 GO:GO:0006397
GO:GO:0040011 GO:GO:0003723 GO:GO:0042127 GO:GO:0007281
GO:GO:0048589 Gene3D:2.40.50.140 InterPro:IPR012340 SUPFAM:SSF50249
GO:GO:0010172 GO:GO:0040020 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
GO:GO:0040022 GO:GO:0008026 EMBL:FO081042 HOGENOM:HOG000175261
InterPro:IPR022967 SMART:SM00316 GeneTree:ENSGT00700000104241
KO:K12818 OMA:NAWCYEN EMBL:AF286899 PIR:T15921 RefSeq:NP_495019.1
UniGene:Cel.7556 ProteinModelPortal:Q09530 SMR:Q09530
DIP:DIP-25759N IntAct:Q09530 MINT:MINT-1046882 STRING:Q09530
PaxDb:Q09530 EnsemblMetazoa:EEED8.5 GeneID:173920
KEGG:cel:CELE_EEED8.5 UCSC:EEED8.5 CTD:173920 WormBase:EEED8.5
InParanoid:Q09530 NextBio:881669 Uniprot:Q09530
Length = 1200
Score = 884 (316.2 bits), Expect = 2.7e-92, Sum P(2) = 2.7e-92
Identities = 162/232 (69%), Positives = 193/232 (83%)
Query: 2 DSLVVTPISQMAEFPLEPNLSKMLIMSVHLQCSDEVLTIVSMLSVQNVFYRPXXXXXXXX 61
D L+ +MAEFPLEP+LSK+LIMSV L CS+EVLTIV+ML+VQN+FYRP
Sbjct: 945 DGLLTKLGRRMAEFPLEPSLSKLLIMSVDLGCSEEVLTIVAMLNVQNIFYRPKEKQDHAD 1004
Query: 62 XXXXXFNQMEGDHITLLAVYNSWRNNKFSNAWCYENFVQIRTLKRAQDVRKQLLGIMDRH 121
F+Q EGDH+TLLAVYNSW+N+ FS WC+ENF+Q+R++KRAQD+RKQLLGIMDRH
Sbjct: 1005 QKKAKFHQPEGDHLTLLAVYNSWKNHHFSQPWCFENFIQVRSMKRAQDIRKQLLGIMDRH 1064
Query: 122 KLDVVSAGKNTVRVQKAVCSGFFRNAAKKDPQEGYRTLVDSQVVYIHPSSALFNRQPEWV 181
KL +VS G++ RVQKA+CSGFFRNAAK+DPQEGYRTL D Q VYIHPSSA F +QPEWV
Sbjct: 1065 KLLMVSCGRDVSRVQKAICSGFFRNAAKRDPQEGYRTLTDGQNVYIHPSSACFQQQPEWV 1124
Query: 182 IYHELVQTTKEYMREVTSIDPKWLVEFAPAFFKFSDPTKLSKFKKNQRLEPL 233
+YHELV TTKEYMREVT+IDPKWLVEFAP+FFK D TKLS FK+NQ+++PL
Sbjct: 1125 VYHELVMTTKEYMREVTAIDPKWLVEFAPSFFKIGDSTKLSTFKRNQKIDPL 1176
Score = 587 (211.7 bits), Expect = 9.2e-94, Sum P(3) = 9.2e-94
Identities = 105/139 (75%), Positives = 123/139 (88%)
Query: 330 DVRKQLLGIMDRHKLDVVSAGKNTVRVQKAVCSGFFRNAAKKDPQEGYRTLVDSQVVYIH 389
D+RKQLLGIMDRHKL +VS G++ RVQKA+CSGFFRNAAK+DPQEGYRTL D Q VYIH
Sbjct: 1052 DIRKQLLGIMDRHKLLMVSCGRDVSRVQKAICSGFFRNAAKRDPQEGYRTLTDGQNVYIH 1111
Query: 390 PSSALFNRQPEWVIYHELVQTTKEYMREVTSIDPKWLVEFAPAFFKFSDPTKLSKFKKNQ 449
PSSA F +QPEWV+YHELV TTKEYMREVT+IDPKWLVEFAP+FFK D TKLS FK+NQ
Sbjct: 1112 PSSACFQQQPEWVVYHELVMTTKEYMREVTAIDPKWLVEFAPSFFKIGDSTKLSTFKRNQ 1171
Query: 450 RLEPLYNKYEEPNAWRISR 468
+++PL++KY + NAWRI+R
Sbjct: 1172 KIDPLFDKYADANAWRITR 1190
Score = 370 (135.3 bits), Expect = 9.2e-94, Sum P(3) = 9.2e-94
Identities = 77/127 (60%), Positives = 94/127 (74%)
Query: 217 DPTKLSKFKKNQRLEPLQRTNRISFPPGLLKQAVKKRPEIKLIVTSATLDAVKFSSYFFE 276
DP LS + E +RT GLLK A +KRPE+KLI+TSATLD+VKFS YF E
Sbjct: 648 DPD-LSGYSLIMLDEAHERTIHTDVLFGLLKAAARKRPELKLIITSATLDSVKFSEYFLE 706
Query: 277 APIFTIPGRTFPVEVLYTKEPETDYLDASLITVMQIHLREPPGDVLLFLTGKLDVRKQLL 336
APIFTIPGRTFPVE+LYT+EPE+DYL+A+ ITVMQIHL EPPGDVL+FLTG+ ++
Sbjct: 707 APIFTIPGRTFPVEILYTREPESDYLEAAHITVMQIHLTEPPGDVLVFLTGQEEIDTSCE 766
Query: 337 GIMDRHK 343
+ +R K
Sbjct: 767 VLYERMK 773
Score = 343 (125.8 bits), Expect = 1.3e-62, Sum P(3) = 1.3e-62
Identities = 66/75 (88%), Positives = 71/75 (94%)
Query: 468 REEIDTACEILYERMKSLGPDVPELIILPVYSALPSEMQTRIFEAAPPGSRKVVIATNIA 527
+EEIDT+CE+LYERMKS+GPDVPELIILPVY ALPSEMQTRIF+ AP G RKVVIATNIA
Sbjct: 758 QEEIDTSCEVLYERMKSMGPDVPELIILPVYGALPSEMQTRIFDPAPAGKRKVVIATNIA 817
Query: 528 ETSLTIDGIFYVVDP 542
ETSLTIDGIFYVVDP
Sbjct: 818 ETSLTIDGIFYVVDP 832
Score = 55 (24.4 bits), Expect = 2.7e-92, Sum P(2) = 2.7e-92
Identities = 12/13 (92%), Positives = 12/13 (92%)
Query: 1 MDSLVVTPISQMA 13
MDSLVVTPISQ A
Sbjct: 846 MDSLVVTPISQAA 858
Score = 40 (19.1 bits), Expect = 9.2e-94, Sum P(3) = 9.2e-94
Identities = 11/39 (28%), Positives = 19/39 (48%)
Query: 117 IMDRHKLDVVSAGKNTVRVQKAVCSGFFRNAAK-KDPQE 154
I D HK+ ++S K ++ + + N AK K+ E
Sbjct: 90 IKDSHKITLISDAKEEIKARLPALA--MANTAKEKEDNE 126
Score = 40 (19.1 bits), Expect = 2.4e-27, Sum P(2) = 2.4e-27
Identities = 11/39 (28%), Positives = 19/39 (48%)
Query: 338 IMDRHKLDVVSAGKNTVRVQKAVCSGFFRNAAK-KDPQE 375
I D HK+ ++S K ++ + + N AK K+ E
Sbjct: 90 IKDSHKITLISDAKEEIKARLPALA--MANTAKEKEDNE 126
>DICTYBASE|DDB_G0291183 [details] [associations]
symbol:dhx8 "putative RNA splicing factor"
species:44689 "Dictyostelium discoideum" [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0003723 "RNA binding" evidence=IEA] [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0008380 "RNA splicing" evidence=IEA;ISS]
[GO:0006396 "RNA processing" evidence=ISS] [GO:0005681
"spliceosomal complex" evidence=IEA;ISS] [GO:0004004 "ATP-dependent
RNA helicase activity" evidence=ISS] [GO:0016787 "hydrolase
activity" evidence=IEA] [GO:0006397 "mRNA processing" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0000166 "nucleotide
binding" evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR003029 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF00575 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS50126 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
dictyBase:DDB_G0291183 GO:GO:0005524 GO:GO:0008380 GO:GO:0006397
GO:GO:0005681 GenomeReviews:CM000154_GR GO:GO:0003723
Gene3D:2.40.50.140 InterPro:IPR012340 SUPFAM:SSF50249
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643
InterPro:IPR011709 Pfam:PF07717 GO:GO:0004004 EMBL:AAFI02000175
InterPro:IPR022967 SMART:SM00316 KO:K12818 OMA:NAWCYEN
RefSeq:XP_635385.1 HSSP:P05055 ProteinModelPortal:Q54F05
EnsemblProtists:DDB0233399 GeneID:8628033 KEGG:ddi:DDB_G0291183
ProtClustDB:CLSZ2846610 Uniprot:Q54F05
Length = 1160
Score = 846 (302.9 bits), Expect = 9.1e-88, Sum P(2) = 9.1e-88
Identities = 154/223 (69%), Positives = 183/223 (82%)
Query: 11 QMAEFPLEPNLSKMLIMSVHLQCSDEVLTIVSMLSVQNVFYRPXXXXXXXXXXXXXFNQM 70
+MAEFPL+P LSKMLI SV L CSDE+LT+V+MLSVQNVFYRP F Q
Sbjct: 922 KMAEFPLDPQLSKMLIASVDLGCSDEILTVVAMLSVQNVFYRPKEKQALADQKKAKFFQP 981
Query: 71 EGDHITLLAVYNSWRNNKFSNAWCYENFVQIRTLKRAQDVRKQLLGIMDRHKLDVVSAGK 130
EGDH+TLL VY SW+N+KFSN WC+ENFVQ R+L+RAQDVRKQL+ IMDR+KLD++SAG+
Sbjct: 982 EGDHLTLLNVYESWKNSKFSNPWCFENFVQARSLRRAQDVRKQLITIMDRYKLDIISAGR 1041
Query: 131 NTVRVQKAVCSGFFRNAAKKDPQEGYRTLVDSQVVYIHPSSALFNRQPEWVIYHELVQTT 190
N ++QKA+CSGFF NA+KKDP EGY+TLV+ Q VYIHPSS LFNR P+WVIYHELV TT
Sbjct: 1042 NYTKIQKAICSGFFANASKKDPNEGYKTLVEGQPVYIHPSSTLFNRNPDWVIYHELVMTT 1101
Query: 191 KEYMREVTSIDPKWLVEFAPAFFKFSDPTKLSKFKKNQRLEPL 233
KEYMREV +IDPKWLVE AP FFK SDP K+SK K+ +++EPL
Sbjct: 1102 KEYMREVCTIDPKWLVELAPKFFKTSDPNKISKRKRKEKIEPL 1144
Score = 566 (204.3 bits), Expect = 3.2e-87, Sum P(2) = 3.2e-87
Identities = 99/141 (70%), Positives = 121/141 (85%)
Query: 330 DVRKQLLGIMDRHKLDVVSAGKNTVRVQKAVCSGFFRNAAKKDPQEGYRTLVDSQVVYIH 389
DVRKQL+ IMDR+KLD++SAG+N ++QKA+CSGFF NA+KKDP EGY+TLV+ Q VYIH
Sbjct: 1020 DVRKQLITIMDRYKLDIISAGRNYTKIQKAICSGFFANASKKDPNEGYKTLVEGQPVYIH 1079
Query: 390 PSSALFNRQPEWVIYHELVQTTKEYMREVTSIDPKWLVEFAPAFFKFSDPTKLSKFKKNQ 449
PSS LFNR P+WVIYHELV TTKEYMREV +IDPKWLVE AP FFK SDP K+SK K+ +
Sbjct: 1080 PSSTLFNRNPDWVIYHELVMTTKEYMREVCTIDPKWLVELAPKFFKTSDPNKISKRKRKE 1139
Query: 450 RLEPLYNKYEEPNAWRISREE 470
++EPLY+KY +PNAWR S+ +
Sbjct: 1140 KIEPLYDKYNDPNAWRPSKRK 1160
Score = 345 (126.5 bits), Expect = 3.2e-87, Sum P(2) = 3.2e-87
Identities = 65/95 (68%), Positives = 81/95 (85%)
Query: 244 GLLKQAVKKRPEIKLIVTSATLDAVKFSSYFFEAPIFTIPGRTFPVEVLYTKEPETDYLD 303
GLLKQA+++RPE+K+++TSATL+A KFS YF A +F IPGRTFPV++ YTK+PE DYLD
Sbjct: 642 GLLKQALQRRPELKVLITSATLEAEKFSKYFMNAQLFIIPGRTFPVDIRYTKDPEADYLD 701
Query: 304 ASLITVMQIHLREPPGDVLLFLTGK--LDVRKQLL 336
ASLITVMQIHL EPPGD+LLFLTG+ +D Q+L
Sbjct: 702 ASLITVMQIHLSEPPGDILLFLTGQEEIDAACQIL 736
Score = 337 (123.7 bits), Expect = 7.7e-59, Sum P(2) = 7.7e-59
Identities = 65/75 (86%), Positives = 72/75 (96%)
Query: 468 REEIDTACEILYERMKSLGPDVPELIILPVYSALPSEMQTRIFEAAPPGSRKVVIATNIA 527
+EEID AC+ILYERMKSLG +VP+LIILPVYSALPSEMQT+IFE APPGSRKVVIATNIA
Sbjct: 726 QEEIDAACQILYERMKSLGSNVPDLIILPVYSALPSEMQTKIFEPAPPGSRKVVIATNIA 785
Query: 528 ETSLTIDGIFYVVDP 542
ETSLTIDGI+YV+DP
Sbjct: 786 ETSLTIDGIYYVIDP 800
Score = 50 (22.7 bits), Expect = 9.1e-88, Sum P(2) = 9.1e-88
Identities = 11/13 (84%), Positives = 11/13 (84%)
Query: 1 MDSLVVTPISQMA 13
MDSLVV PISQ A
Sbjct: 814 MDSLVVAPISQAA 826
>TAIR|locus:2088847 [details] [associations]
symbol:AT3G26560 species:3702 "Arabidopsis thaliana"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0003723 "RNA
binding" evidence=IEA;ISS] [GO:0004004 "ATP-dependent RNA helicase
activity" evidence=ISS] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA;ISS]
[GO:0005634 "nucleus" evidence=ISM] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0005739 "mitochondrion"
evidence=IDA] [GO:0005829 "cytosol" evidence=IDA] [GO:0009506
"plasmodesma" evidence=IDA] [GO:0000226 "microtubule cytoskeleton
organization" evidence=RCA] [GO:0000911 "cytokinesis by cell plate
formation" evidence=RCA] [GO:0006486 "protein glycosylation"
evidence=RCA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR003029 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF00575 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS50126 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
GO:GO:0005829 GO:GO:0005739 GO:GO:0009506 GO:GO:0005524
GO:GO:0005634 EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0008380
GO:GO:0006397 GO:GO:0003723 Gene3D:2.40.50.140 InterPro:IPR012340
SUPFAM:SSF50249 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
HOGENOM:HOG000175261 InterPro:IPR022967 SMART:SM00316 EMBL:X98130
EMBL:X97970 EMBL:AB028611 IPI:IPI00530246 RefSeq:NP_189288.1
UniGene:At.46918 ProteinModelPortal:Q38953 SMR:Q38953 STRING:Q38953
PaxDb:Q38953 PRIDE:Q38953 EnsemblPlants:AT3G26560.1 GeneID:822264
KEGG:ath:AT3G26560 GeneFarm:1800 TAIR:At3g26560 InParanoid:Q38953
KO:K12818 OMA:NAWCYEN PhylomeDB:Q38953 ProtClustDB:CLSN2684863
Genevestigator:Q38953 GermOnline:AT3G26560 Uniprot:Q38953
Length = 1168
Score = 801 (287.0 bits), Expect = 1.3e-81, Sum P(2) = 1.3e-81
Identities = 146/223 (65%), Positives = 179/223 (80%)
Query: 11 QMAEFPLEPNLSKMLIMSVHLQCSDEVLTIVSMLSVQNVFYRPXXXXXXXXXXXXXFNQM 70
+MAEFPLEP LSKML+ SV L CSDE+LT+++M+ N+FYRP F Q
Sbjct: 929 KMAEFPLEPPLSKMLLASVDLGCSDEILTMIAMIQTGNIFYRPREKQAQADQKRAKFFQP 988
Query: 71 EGDHITLLAVYNSWRNNKFSNAWCYENFVQIRTLKRAQDVRKQLLGIMDRHKLDVVSAGK 130
EGDH+TLLAVY +W+ FS WC+ENF+Q R+L+RAQDVRKQLL IMD++KLDVV+AGK
Sbjct: 989 EGDHLTLLAVYEAWKAKNFSGPWCFENFIQSRSLRRAQDVRKQLLSIMDKYKLDVVTAGK 1048
Query: 131 NTVRVQKAVCSGFFRNAAKKDPQEGYRTLVDSQVVYIHPSSALFNRQPEWVIYHELVQTT 190
N +++KA+ +GFF + A+KDPQEGYRTLV++Q VYIHPSSALF RQP+WVIYH+LV TT
Sbjct: 1049 NFTKIRKAITAGFFFHGARKDPQEGYRTLVENQPVYIHPSSALFQRQPDWVIYHDLVMTT 1108
Query: 191 KEYMREVTSIDPKWLVEFAPAFFKFSDPTKLSKFKKNQRLEPL 233
KEYMREVT IDPKWLVE AP FFK SDPTK+SK K+ +R+EPL
Sbjct: 1109 KEYMREVTVIDPKWLVELAPRFFKVSDPTKMSKRKRQERIEPL 1151
Score = 563 (203.2 bits), Expect = 5.6e-87, Sum P(2) = 5.6e-87
Identities = 100/139 (71%), Positives = 123/139 (88%)
Query: 330 DVRKQLLGIMDRHKLDVVSAGKNTVRVQKAVCSGFFRNAAKKDPQEGYRTLVDSQVVYIH 389
DVRKQLL IMD++KLDVV+AGKN +++KA+ +GFF + A+KDPQEGYRTLV++Q VYIH
Sbjct: 1027 DVRKQLLSIMDKYKLDVVTAGKNFTKIRKAITAGFFFHGARKDPQEGYRTLVENQPVYIH 1086
Query: 390 PSSALFNRQPEWVIYHELVQTTKEYMREVTSIDPKWLVEFAPAFFKFSDPTKLSKFKKNQ 449
PSSALF RQP+WVIYH+LV TTKEYMREVT IDPKWLVE AP FFK SDPTK+SK K+ +
Sbjct: 1087 PSSALFQRQPDWVIYHDLVMTTKEYMREVTVIDPKWLVELAPRFFKVSDPTKMSKRKRQE 1146
Query: 450 RLEPLYNKYEEPNAWRISR 468
R+EPLY++Y EPN+WR+S+
Sbjct: 1147 RIEPLYDRYHEPNSWRLSK 1165
Score = 346 (126.9 bits), Expect = 5.6e-87, Sum P(2) = 5.6e-87
Identities = 73/132 (55%), Positives = 93/132 (70%)
Query: 221 LSKFKKNQRLEPLQRTNRISFPPGLLKQAVKKRPEIKLIVTSATLDAVKFSSYFFEAPIF 280
LS++ E +RT GLLK+ +K+R +++LIVTSATLDA KFS YFF IF
Sbjct: 626 LSQYSVIMLDEAHERTIHTDVLFGLLKKLMKRRLDLRLIVTSATLDAEKFSGYFFNCNIF 685
Query: 281 TIPGRTFPVEVLYTKEPETDYLDASLITVMQIHLREPPGDVLLFLTGKLDVRKQLLGIMD 340
TIPGRTFPVE+LYTK+PETDYLDA+LITV+QIHL EP GD+L+FLTG+ ++ + +
Sbjct: 686 TIPGRTFPVEILYTKQPETDYLDAALITVLQIHLTEPEGDILVFLTGQEEIDSACQSLYE 745
Query: 341 RHKLDVVSAGKN 352
R K GKN
Sbjct: 746 RMK----GLGKN 753
Score = 313 (115.2 bits), Expect = 1.3e-24, P = 1.3e-24
Identities = 60/75 (80%), Positives = 68/75 (90%)
Query: 468 REEIDTACEILYERMKSLGPDVPELIILPVYSALPSEMQTRIFEAAPPGSRKVVIATNIA 527
+EEID+AC+ LYERMK LG +VPELIILPVYSALPSEMQ+RIF+ PPG RKVV+ATNIA
Sbjct: 733 QEEIDSACQSLYERMKGLGKNVPELIILPVYSALPSEMQSRIFDPPPPGKRKVVVATNIA 792
Query: 528 ETSLTIDGIFYVVDP 542
E SLTIDGI+YVVDP
Sbjct: 793 EASLTIDGIYYVVDP 807
Score = 44 (20.5 bits), Expect = 1.3e-81, Sum P(2) = 1.3e-81
Identities = 8/11 (72%), Positives = 11/11 (100%)
Query: 1 MDSLVVTPISQ 11
++SLV+TPISQ
Sbjct: 821 LESLVITPISQ 831
>UNIPROTKB|G4NFJ0 [details] [associations]
symbol:MGG_08807 "Pre-mRNA-splicing factor ATP-dependent
RNA helicase prp22" species:242507 "Magnaporthe oryzae 70-15"
[GO:0005575 "cellular_component" evidence=ND] [GO:0008150
"biological_process" evidence=ND] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR003029 InterPro:IPR003593
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF00575 Pfam:PF04408 PROSITE:PS00690 PROSITE:PS50126
PROSITE:PS51194 SMART:SM00382 SMART:SM00490 SMART:SM00847
GO:GO:0005524 GO:GO:0003723 Gene3D:2.40.50.140 InterPro:IPR012340
SUPFAM:SSF50249 EMBL:CM001236 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
InterPro:IPR022967 SMART:SM00316 KO:K12818 RefSeq:XP_003719164.1
ProteinModelPortal:G4NFJ0 EnsemblFungi:MGG_08807T0 GeneID:2678973
KEGG:mgr:MGG_08807 Uniprot:G4NFJ0
Length = 1207
Score = 691 (248.3 bits), Expect = 7.9e-70, Sum P(2) = 7.9e-70
Identities = 127/223 (56%), Positives = 166/223 (74%)
Query: 11 QMAEFPLEPNLSKMLIMSVHLQCSDEVLTIVSMLSVQNVFYRPXXXXXXXXXXXXXFNQM 70
+MA+FP+EP+LSK+LI SV ++CSDE+L+IV+ML++ NVFYRP F+
Sbjct: 956 KMADFPMEPSLSKVLIASVEMRCSDEMLSIVAMLNLPNVFYRPKEKQTQADAKKAKFHDP 1015
Query: 71 EGDHITLLAVYNSWRNNKFSNAWCYENFVQIRTLKRAQDVRKQLLGIMDRHKLDVVSAGK 130
GDH+TLL VYN+W+ +++S WC ENF+Q R L RA+DVR Q+ IM R K V+S G
Sbjct: 1016 NGDHLTLLNVYNAWKQSRYSKPWCAENFIQFRALTRARDVRNQIERIMQRFKYQVMSCGS 1075
Query: 131 NTVRVQKAVCSGFFRNAAKKDPQEGYRTLVDSQVVYIHPSSALFNRQPEWVIYHELVQTT 190
+T RV++A+CSGFFRNAA+KD QEGYRTL++ VY+HPSSALF + EWVIYH LV TT
Sbjct: 1076 DTNRVRQALCSGFFRNAARKDQQEGYRTLIEGTPVYLHPSSALFGKHAEWVIYHTLVLTT 1135
Query: 191 KEYMREVTSIDPKWLVEFAPAFFKFSDPTKLSKFKKNQRLEPL 233
KEYM TSI+PKWLV+ AP FFK S KLSK ++ +R++PL
Sbjct: 1136 KEYMHCTTSIEPKWLVDAAPTFFKVSASDKLSKRRQQERIQPL 1178
Score = 459 (166.6 bits), Expect = 5.2e-76, Sum P(2) = 5.2e-76
Identities = 87/145 (60%), Positives = 108/145 (74%)
Query: 325 LTGKLDVRKQLLGIMDRHKLDVVSAGKNTVRVQKAVCSGFFRNAAKKDPQEGYRTLVDSQ 384
LT DVR Q+ IM R K V+S G +T RV++A+CSGFFRNAA+KD QEGYRTL++
Sbjct: 1049 LTRARDVRNQIERIMQRFKYQVMSCGSDTNRVRQALCSGFFRNAARKDQQEGYRTLIEGT 1108
Query: 385 VVYIHPSSALFNRQPEWVIYHELVQTTKEYMREVTSIDPKWLVEFAPAFFKFSDPTKLSK 444
VY+HPSSALF + EWVIYH LV TTKEYM TSI+PKWLV+ AP FFK S KLSK
Sbjct: 1109 PVYLHPSSALFGKHAEWVIYHTLVLTTKEYMHCTTSIEPKWLVDAAPTFFKVSASDKLSK 1168
Query: 445 FKKNQRLEPLYNKYEEPNAWRISRE 469
++ +R++PLYNK+E N WR+S +
Sbjct: 1169 RRQQERIQPLYNKFEGENDWRLSAQ 1193
Score = 349 (127.9 bits), Expect = 5.2e-76, Sum P(2) = 5.2e-76
Identities = 71/127 (55%), Positives = 93/127 (73%)
Query: 217 DPTKLSKFKKNQRLEPLQRTNRISFPPGLLKQAVKKRPEIKLIVTSATLDAVKFSSYFFE 276
DP L ++ E +RT LLK+A ++RP++K+IVTSATLDA KFS+YF E
Sbjct: 650 DPD-LKRYSVIMLDEAHERTIATDVLFALLKKATRRRPDLKIIVTSATLDADKFSAYFNE 708
Query: 277 APIFTIPGRTFPVEVLYTKEPETDYLDASLITVMQIHLREPPGDVLLFLTGKLDVRKQLL 336
PIFTIPGRTFPVE+LY+K+PE+DYLDA+L TVMQIH+ EPPGD+LLFLTG+ ++
Sbjct: 709 CPIFTIPGRTFPVEILYSKDPESDYLDAALTTVMQIHIDEPPGDILLFLTGQEEIDTSCE 768
Query: 337 GIMDRHK 343
+ +R K
Sbjct: 769 ILFERMK 775
Score = 329 (120.9 bits), Expect = 1.9e-58, Sum P(2) = 1.9e-58
Identities = 63/75 (84%), Positives = 72/75 (96%)
Query: 468 REEIDTACEILYERMKSLGPDVPELIILPVYSALPSEMQTRIFEAAPPGSRKVVIATNIA 527
+EEIDT+CEIL+ERMK+LGP VPELIILPVYSALP+EMQ+RIF+ APPGSRKVVIATNIA
Sbjct: 760 QEEIDTSCEILFERMKALGPSVPELIILPVYSALPNEMQSRIFDPAPPGSRKVVIATNIA 819
Query: 528 ETSLTIDGIFYVVDP 542
ETS+TID I+YVVDP
Sbjct: 820 ETSITIDHIYYVVDP 834
Score = 52 (23.4 bits), Expect = 7.9e-70, Sum P(2) = 7.9e-70
Identities = 11/11 (100%), Positives = 11/11 (100%)
Query: 1 MDSLVVTPISQ 11
MDSLVVTPISQ
Sbjct: 848 MDSLVVTPISQ 858
>POMBASE|SPAC10F6.02c [details] [associations]
symbol:prp22 "ATP-dependent RNA helicase Prp22"
species:4896 "Schizosaccharomyces pombe" [GO:0000390 "spliceosomal
complex disassembly" evidence=ISS] [GO:0003723 "RNA binding"
evidence=IEA] [GO:0004004 "ATP-dependent RNA helicase activity"
evidence=ISS] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IDA] [GO:0005681 "spliceosomal complex"
evidence=ISS] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR003029 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF00575 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS50126 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
PomBase:SPAC10F6.02c GO:GO:0005524 EMBL:CU329670
GenomeReviews:CU329670_GR GO:GO:0005681 GO:GO:0003723
Gene3D:2.40.50.140 InterPro:IPR012340 SUPFAM:SSF50249
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643
InterPro:IPR011709 Pfam:PF07717 GO:GO:0004004 HOGENOM:HOG000175261
InterPro:IPR022967 SMART:SM00316 GO:GO:0000390 KO:K12818
OMA:NAWCYEN PIR:T37496 RefSeq:NP_593253.1 ProteinModelPortal:O42643
IntAct:O42643 STRING:O42643 PRIDE:O42643
EnsemblFungi:SPAC10F6.02c.1 GeneID:2542978 KEGG:spo:SPAC10F6.02c
OrthoDB:EOG45TGW9 NextBio:20804011 Uniprot:O42643
Length = 1168
Score = 647 (232.8 bits), Expect = 5.0e-65, Sum P(2) = 5.0e-65
Identities = 120/243 (49%), Positives = 173/243 (71%)
Query: 2 DSLVVTPISQ-MAEFPLEPNLSKMLIMSVHLQCSDEVLTIVSMLSVQNVFYRPXXXXXXX 60
D ++TP+ + MA+FP+EP LSK+LI SV L CS+E+L+I++MLSV N++ RP
Sbjct: 915 DEGLLTPLGRKMADFPMEPQLSKVLITSVELGCSEEMLSIIAMLSVPNIWSRPREKQQEA 974
Query: 61 XXXXXXFNQMEGDHITLLAVYNSWRNNKFSNAWCYENFVQIRTLKRAQDVRKQLLGIMDR 120
F E DH+TLL VY +W+ N+ S+ WCYE+++Q R ++RA+DVRKQL+ +MDR
Sbjct: 975 DRQRAQFANPESDHLTLLNVYTTWKMNRCSDNWCYEHYIQARGMRRAEDVRKQLIRLMDR 1034
Query: 121 HKLDVVSAGKNTVRVQKAVCSGFFRNAAKKDPQEG-YRTLVDSQVVYIHPSSALFNRQPE 179
++ VVS G+ + +A+CSG+F N AK+D EG Y+T+V++ VY+HPS LF + E
Sbjct: 1035 YRHPVVSCGRKRELILRALCSGYFTNVAKRDSHEGCYKTIVENAPVYMHPSGVLFGKAAE 1094
Query: 180 WVIYHELVQTTKEYMREVTSIDPKWLVEFAPAFFKFSDPTKLSKFKKNQRLEPLQRTNRI 239
WVIYHEL+QT+KEYM V++++PKWLVE AP FFKF++ ++SK KKN ++ PL NR
Sbjct: 1095 WVIYHELIQTSKEYMHTVSTVNPKWLVEVAPTFFKFANANQVSKTKKNLKVLPLY--NRF 1152
Query: 240 SFP 242
P
Sbjct: 1153 EKP 1155
Score = 438 (159.2 bits), Expect = 8.9e-76, Sum P(3) = 8.9e-76
Identities = 76/141 (53%), Positives = 110/141 (78%)
Query: 330 DVRKQLLGIMDRHKLDVVSAGKNTVRVQKAVCSGFFRNAAKKDPQEG-YRTLVDSQVVYI 388
DVRKQL+ +MDR++ VVS G+ + +A+CSG+F N AK+D EG Y+T+V++ VY+
Sbjct: 1023 DVRKQLIRLMDRYRHPVVSCGRKRELILRALCSGYFTNVAKRDSHEGCYKTIVENAPVYM 1082
Query: 389 HPSSALFNRQPEWVIYHELVQTTKEYMREVTSIDPKWLVEFAPAFFKFSDPTKLSKFKKN 448
HPS LF + EWVIYHEL+QT+KEYM V++++PKWLVE AP FFKF++ ++SK KKN
Sbjct: 1083 HPSGVLFGKAAEWVIYHELIQTSKEYMHTVSTVNPKWLVEVAPTFFKFANANQVSKTKKN 1142
Query: 449 QRLEPLYNKYEEPNAWRISRE 469
++ PLYN++E+P+ WRIS++
Sbjct: 1143 LKVLPLYNRFEKPDEWRISKQ 1163
Score = 349 (127.9 bits), Expect = 8.9e-76, Sum P(3) = 8.9e-76
Identities = 72/128 (56%), Positives = 94/128 (73%)
Query: 217 DPTKLSKFKKNQRLEPLQRTNRISFPPGLLKQAVKKRPEIKLIVTSATLDAVKFSSYFFE 276
DP LSK+ E +RT GLLK V KRP++KLIVTSATLDA +FSSYF++
Sbjct: 619 DPL-LSKYSVIILDEAHERTVATDVLFGLLKGTVLKRPDLKLIVTSATLDAERFSSYFYK 677
Query: 277 APIFTIPGRTFPVEVLYTKEPETDYLDASLITVMQIHLREPPGDVLLFLTGKLDVRKQLL 336
PIFTIPGR++PVE++YTK+PE DYLDA+L+TVMQIHL E PGD+L+FLTG+ ++
Sbjct: 678 CPIFTIPGRSYPVEIMYTKQPEADYLDAALMTVMQIHLSEGPGDILVFLTGQEEIDTSCE 737
Query: 337 GIMDRHKL 344
+ +R K+
Sbjct: 738 ILYERSKM 745
Score = 323 (118.8 bits), Expect = 5.4e-58, Sum P(3) = 5.4e-58
Identities = 62/75 (82%), Positives = 69/75 (92%)
Query: 468 REEIDTACEILYERMKSLGPDVPELIILPVYSALPSEMQTRIFEAAPPGSRKVVIATNIA 527
+EEIDT+CEILYER K LG +PEL+ILPVYSALPSE+Q+RIFE APPG RKVVIATNIA
Sbjct: 729 QEEIDTSCEILYERSKMLGDSIPELVILPVYSALPSEIQSRIFEPAPPGGRKVVIATNIA 788
Query: 528 ETSLTIDGIFYVVDP 542
ETSLTIDGI+YVVDP
Sbjct: 789 ETSLTIDGIYYVVDP 803
Score = 51 (23.0 bits), Expect = 5.0e-65, Sum P(2) = 5.0e-65
Identities = 10/11 (90%), Positives = 11/11 (100%)
Query: 1 MDSLVVTPISQ 11
MDSL+VTPISQ
Sbjct: 817 MDSLIVTPISQ 827
Score = 43 (20.2 bits), Expect = 8.9e-76, Sum P(3) = 8.9e-76
Identities = 15/46 (32%), Positives = 18/46 (39%)
Query: 183 YHELVQTTKEYMREVTSIDPKWLVEFAPAFFKFSDPTK-LSKFKKN 227
Y LV +R T ID L EF D +K +FK N
Sbjct: 9 YLSLVSKVASEIRNHTGIDDNTLAEF---IINLHDQSKNYDEFKNN 51
Score = 43 (20.2 bits), Expect = 2.5e-25, Sum P(2) = 2.5e-25
Identities = 15/46 (32%), Positives = 18/46 (39%)
Query: 404 YHELVQTTKEYMREVTSIDPKWLVEFAPAFFKFSDPTK-LSKFKKN 448
Y LV +R T ID L EF D +K +FK N
Sbjct: 9 YLSLVSKVASEIRNHTGIDDNTLAEF---IINLHDQSKNYDEFKNN 51
Score = 40 (19.1 bits), Expect = 3.0e-25, Sum P(3) = 3.0e-25
Identities = 14/56 (25%), Positives = 26/56 (46%)
Query: 416 REVTSIDPKWLVEFAPAFFKFSDPTKLSKFKKNQRLEPLYNKYEEPNAWRISREEI 471
R++TS P W A + T LS ++ + L P++ K + +S+ +I
Sbjct: 475 RQLTSETPSWRQATRNANISYGKRTTLSMKEQREGL-PVF-KLRKQFLEAVSKNQI 528
Score = 37 (18.1 bits), Expect = 3.8e-75, Sum P(3) = 3.8e-75
Identities = 12/35 (34%), Positives = 15/35 (42%)
Query: 195 REVTSIDPKWLVEFAPAFFKFSDPTKLSKFKKNQR 229
R++TS P W A + T LS K QR
Sbjct: 475 RQLTSETPSWRQATRNANISYGKRTTLSM--KEQR 507
>ASPGD|ASPL0000070923 [details] [associations]
symbol:AN4721 species:162425 "Emericella nidulans"
[GO:0008150 "biological_process" evidence=ND] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR003029 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF00575
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS50126 PROSITE:PS51194
SMART:SM00490 SMART:SM00847 GO:GO:0005524 GO:GO:0003723
EMBL:BN001303 Gene3D:2.40.50.140 InterPro:IPR012340 SUPFAM:SSF50249
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643
InterPro:IPR011709 Pfam:PF07717 EMBL:AACD01000080 GO:GO:0008026
HOGENOM:HOG000175261 InterPro:IPR022967 SMART:SM00316 KO:K12818
OMA:NAWCYEN OrthoDB:EOG45TGW9 RefSeq:XP_662325.1
ProteinModelPortal:Q5B409 EnsemblFungi:CADANIAT00005708
GeneID:2872518 KEGG:ani:AN4721.2 Uniprot:Q5B409
Length = 1241
Score = 707 (253.9 bits), Expect = 1.8e-71, Sum P(2) = 1.8e-71
Identities = 131/230 (56%), Positives = 174/230 (75%)
Query: 11 QMAEFPLEPNLSKMLIMSVHLQCSDEVLTIVSMLSVQNVFYRPXXXXXXXXXXXXXFNQM 70
+MA+FP+EP L+K+LI SV + CS+E+L+IV+MLS+Q+VFYRP F+
Sbjct: 991 KMADFPMEPALAKVLIASVDMGCSEEMLSIVAMLSIQSVFYRPKEKQQQADQKKAKFHDP 1050
Query: 71 EGDHITLLAVYNSWRNNKFSNAWCYENFVQIRTLKRAQDVRKQLLGIMDRHKLDVVSAGK 130
GDH+TLL VYN+W+ + FSNAWCYENF+Q R ++RAQDVR+QLLGIM R+ +VS G+
Sbjct: 1051 HGDHLTLLNVYNAWKRSGFSNAWCYENFIQARQIRRAQDVRQQLLGIMQRYHHKIVSCGR 1110
Query: 131 NTVRVQKAVCSGFFRNAAKKDPQEGYRTLVDSQVVYIHPSSALFNRQPEWVIYHELVQTT 190
NT +V++A+C+GFFRN+A+KDPQEGY+TLV+ VY+HPSSA+F + E VIYH LV TT
Sbjct: 1111 NTTKVRQALCTGFFRNSARKDPQEGYKTLVEGTPVYMHPSSAMFGKPAEHVIYHTLVLTT 1170
Query: 191 KEYMREVTSIDPKWLVEFAPAFFKFSDPTKLSKFKKNQRLEPLQRTNRIS 240
KEYM T I+PKWLVE AP FFK + +LSK KK +R++PL NR +
Sbjct: 1171 KEYMHCTTGIEPKWLVEAAPTFFKVAPTDRLSKRKKAERIQPLH--NRFA 1218
Score = 439 (159.6 bits), Expect = 1.9e-74, Sum P(2) = 1.9e-74
Identities = 80/140 (57%), Positives = 108/140 (77%)
Query: 330 DVRKQLLGIMDRHKLDVVSAGKNTVRVQKAVCSGFFRNAAKKDPQEGYRTLVDSQVVYIH 389
DVR+QLLGIM R+ +VS G+NT +V++A+C+GFFRN+A+KDPQEGY+TLV+ VY+H
Sbjct: 1089 DVRQQLLGIMQRYHHKIVSCGRNTTKVRQALCTGFFRNSARKDPQEGYKTLVEGTPVYMH 1148
Query: 390 PSSALFNRQPEWVIYHELVQTTKEYMREVTSIDPKWLVEFAPAFFKFSDPTKLSKFKKNQ 449
PSSA+F + E VIYH LV TTKEYM T I+PKWLVE AP FFK + +LSK KK +
Sbjct: 1149 PSSAMFGKPAEHVIYHTLVLTTKEYMHCTTGIEPKWLVEAAPTFFKVAPTDRLSKRKKAE 1208
Query: 450 RLEPLYNKYEEPNAWRISRE 469
R++PL+N++ + WR+S +
Sbjct: 1209 RIQPLHNRFAGEDDWRLSAQ 1228
Score = 355 (130.0 bits), Expect = 1.9e-74, Sum P(2) = 1.9e-74
Identities = 71/115 (61%), Positives = 89/115 (77%)
Query: 217 DPTKLSKFKKNQRLEPLQRTNRISFPPGLLKQAVKKRPEIKLIVTSATLDAVKFSSYFFE 276
DP L K+ E +RT GLLK +K+RP+++LIVTSATLDA KFS YF+
Sbjct: 685 DPD-LKKYSVIMLDEAHERTIATDVLFGLLKTTLKRRPDLRLIVTSATLDADKFSEYFYG 743
Query: 277 APIFTIPGRTFPVEVLYTKEPETDYLDASLITVMQIHLREPPGDVLLFLTGKLDV 331
PIF+IPGRTFPVE++Y+KEPE+DYLDA+LITVMQIHL EPPGD+LLFLTG+ ++
Sbjct: 744 CPIFSIPGRTFPVEIMYSKEPESDYLDAALITVMQIHLTEPPGDMLLFLTGQEEI 798
Score = 335 (123.0 bits), Expect = 8.9e-60, Sum P(2) = 8.9e-60
Identities = 63/75 (84%), Positives = 71/75 (94%)
Query: 468 REEIDTACEILYERMKSLGPDVPELIILPVYSALPSEMQTRIFEAAPPGSRKVVIATNIA 527
+EEIDTACEILYERMK+LGP VPEL+ILPVYSALPSEMQ+RIF+ APPG RKVVIATNIA
Sbjct: 795 QEEIDTACEILYERMKALGPSVPELVILPVYSALPSEMQSRIFDPAPPGGRKVVIATNIA 854
Query: 528 ETSLTIDGIFYVVDP 542
ETS+TID I+YV+DP
Sbjct: 855 ETSITIDNIYYVIDP 869
Score = 52 (23.4 bits), Expect = 1.8e-71, Sum P(2) = 1.8e-71
Identities = 11/11 (100%), Positives = 11/11 (100%)
Query: 1 MDSLVVTPISQ 11
MDSLVVTPISQ
Sbjct: 883 MDSLVVTPISQ 893
>UNIPROTKB|F5H658 [details] [associations]
symbol:DHX8 "ATP-dependent RNA helicase DHX8" species:9606
"Homo sapiens" [GO:0003723 "RNA binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IDA]
[GO:0005730 "nucleolus" evidence=IDA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR003029 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF00575
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS50126 PROSITE:PS51194
SMART:SM00490 SMART:SM00847 GO:GO:0005524 GO:GO:0005634
GO:GO:0003723 Gene3D:2.40.50.140 InterPro:IPR012340 SUPFAM:SSF50249
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 InterPro:IPR022967 SMART:SM00316
HGNC:HGNC:2749 EMBL:AC068675 EMBL:AC087650 IPI:IPI01010550
ProteinModelPortal:F5H658 SMR:F5H658 Ensembl:ENST00000540306
UCSC:uc010wig.2 ArrayExpress:F5H658 Bgee:F5H658 Uniprot:F5H658
Length = 1181
Score = 719 (258.2 bits), Expect = 3.6e-72, Sum P(2) = 3.6e-72
Identities = 134/169 (79%), Positives = 148/169 (87%)
Query: 11 QMAEFPLEPNLSKMLIMSVHLQCSDEVLTIVSMLSVQNVFYRPXXXXXXXXXXXXXFNQM 70
+MAEFPLEP L KMLIMSVHL CS+E+LTIVSMLSVQNVFYRP F+Q
Sbjct: 979 RMAEFPLEPMLCKMLIMSVHLGCSEEMLTIVSMLSVQNVFYRPKDKQALADQKKAKFHQT 1038
Query: 71 EGDHITLLAVYNSWRNNKFSNAWCYENFVQIRTLKRAQDVRKQLLGIMDRHKLDVVSAGK 130
EGDH+TLLAVYNSW+NNKFSN WCYENF+Q R+L+RAQD+RKQ+LGIMDRHKLDVVS GK
Sbjct: 1039 EGDHLTLLAVYNSWKNNKFSNPWCYENFIQARSLRRAQDIRKQMLGIMDRHKLDVVSCGK 1098
Query: 131 NTVRVQKAVCSGFFRNAAKKDPQEGYRTLVDSQVVYIHPSSALFNRQPE 179
+TVRVQKA+CSGFFRNAAKKDPQEGYRTL+D QVVYIHPSSALFNRQPE
Sbjct: 1099 STVRVQKAICSGFFRNAAKKDPQEGYRTLIDQQVVYIHPSSALFNRQPE 1147
Score = 381 (139.2 bits), Expect = 3.6e-66, Sum P(2) = 3.6e-66
Identities = 74/101 (73%), Positives = 87/101 (86%)
Query: 231 EPLQRTNRISFPPGLLKQAVKKRPEIKLIVTSATLDAVKFSSYFFEAPIFTIPGRTFPVE 290
E +RT GLLK+ V+KR ++KLIVTSATLDAVKFS YF+EAPIFTIPGRT+PVE
Sbjct: 686 EAHERTIHTDVLFGLLKKTVQKRQDMKLIVTSATLDAVKFSQYFYEAPIFTIPGRTYPVE 745
Query: 291 VLYTKEPETDYLDASLITVMQIHLREPPGDVLLFLTGKLDV 331
+LYTKEPETDYLDASLITVMQIHL EPPGD+L+FLTG+ ++
Sbjct: 746 ILYTKEPETDYLDASLITVMQIHLTEPPGDILVFLTGQEEI 786
Score = 362 (132.5 bits), Expect = 3.6e-66, Sum P(2) = 3.6e-66
Identities = 71/75 (94%), Positives = 74/75 (98%)
Query: 468 REEIDTACEILYERMKSLGPDVPELIILPVYSALPSEMQTRIFEAAPPGSRKVVIATNIA 527
+EEIDTACEILYERMKSLGPDVPELIILPVYSALPSEMQTRIF+ APPGSRKVVIATNIA
Sbjct: 783 QEEIDTACEILYERMKSLGPDVPELIILPVYSALPSEMQTRIFDPAPPGSRKVVIATNIA 842
Query: 528 ETSLTIDGIFYVVDP 542
ETSLTIDGI+YVVDP
Sbjct: 843 ETSLTIDGIYYVVDP 857
Score = 346 (126.9 bits), Expect = 1.7e-64, Sum P(2) = 1.7e-64
Identities = 64/71 (90%), Positives = 69/71 (97%)
Query: 330 DVRKQLLGIMDRHKLDVVSAGKNTVRVQKAVCSGFFRNAAKKDPQEGYRTLVDSQVVYIH 389
D+RKQ+LGIMDRHKLDVVS GK+TVRVQKA+CSGFFRNAAKKDPQEGYRTL+D QVVYIH
Sbjct: 1077 DIRKQMLGIMDRHKLDVVSCGKSTVRVQKAICSGFFRNAAKKDPQEGYRTLIDQQVVYIH 1136
Query: 390 PSSALFNRQPE 400
PSSALFNRQPE
Sbjct: 1137 PSSALFNRQPE 1147
Score = 44 (20.5 bits), Expect = 3.6e-72, Sum P(2) = 3.6e-72
Identities = 9/11 (81%), Positives = 10/11 (90%)
Query: 1 MDSLVVTPISQ 11
+D LVVTPISQ
Sbjct: 871 IDQLVVTPISQ 881
>GENEDB_PFALCIPARUM|PF10_0294 [details] [associations]
symbol:PF10_0294 "RNA helicase, putative"
species:5833 "Plasmodium falciparum" [GO:0004004 "ATP-dependent RNA
helicase activity" evidence=ISS] [GO:0008380 "RNA splicing"
evidence=ISS] [GO:0005575 "cellular_component" evidence=ND]
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR003029
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF00575 Pfam:PF04408 PROSITE:PS00690 PROSITE:PS50126
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0008380 GO:GO:0003723 Gene3D:2.40.50.140 InterPro:IPR012340
SUPFAM:SSF50249 EMBL:AE014185 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717 GO:GO:0004004
HOGENOM:HOG000175261 InterPro:IPR022967 SMART:SM00316 KO:K12818
HSSP:P05055 RefSeq:XP_001347578.1 ProteinModelPortal:Q8IJA4
IntAct:Q8IJA4 MINT:MINT-1724156 EnsemblProtists:PF10_0294:mRNA
GeneID:810451 KEGG:pfa:PF10_0294 EuPathDB:PlasmoDB:PF3D7_1030100
OMA:HRHSKEH ProtClustDB:CLSZ2433181 Uniprot:Q8IJA4
Length = 1290
Score = 623 (224.4 bits), Expect = 3.5e-61, Sum P(2) = 3.5e-61
Identities = 116/228 (50%), Positives = 158/228 (69%)
Query: 11 QMAEFPLEPNLSKMLIMSVHLQCSDEVLTIVSMLSVQNVFYRPXXXXXXXXXXXXXFNQM 70
+MA FP+EPNLSK+L+ S++ C+D+V+TIVSMLSVQN+FYRP F
Sbjct: 1046 KMANFPMEPNLSKILLTSLNFNCTDDVVTIVSMLSVQNIFYRPQNKALLADKKKNKFIMP 1105
Query: 71 EGDHITLLAVYNSWRNNKFSNAWCYENFVQIRTLKRAQDVRKQLLGIMDRHKLDVV-SAG 129
+GD IT L +YN W+ N FSN WC+ENF+Q R LKRAQDVRKQ+L I +++ V S
Sbjct: 1106 QGDLITYLNIYNKWKENSFSNYWCHENFIQSRALKRAQDVRKQMLSIFEKYNYQVKKSTS 1165
Query: 130 KNT----VRVQKAVCSGFFRNAAKKDPQEGYRTLVDSQVVYIHPSSALFNRQPEWVIYHE 185
KN V + K++CSG+F + K+D Q+GY TL+ +Q V+IHPSS LFN+ P +V+YHE
Sbjct: 1166 KNDATKYVNICKSICSGYFNHVCKRDTQQGYTTLLTNQQVFIHPSSTLFNKNPLFVVYHE 1225
Query: 186 LVQTTKEYMREVTSIDPKWLVEFAPAFFKFSDPTKLSKFKKNQRLEPL 233
LV T KEY+R+ T I P+WL++ AP F +D K+SK K +++EPL
Sbjct: 1226 LVLTNKEYIRDCTIIQPQWLIQLAPNLFIPADEKKISKIKLREKIEPL 1273
Score = 394 (143.8 bits), Expect = 5.3e-64, Sum P(2) = 5.3e-64
Identities = 73/146 (50%), Positives = 103/146 (70%)
Query: 330 DVRKQLLGIMDRHKLDVV-SAGKNT----VRVQKAVCSGFFRNAAKKDPQEGYRTLVDSQ 384
DVRKQ+L I +++ V S KN V + K++CSG+F + K+D Q+GY TL+ +Q
Sbjct: 1144 DVRKQMLSIFEKYNYQVKKSTSKNDATKYVNICKSICSGYFNHVCKRDTQQGYTTLLTNQ 1203
Query: 385 VVYIHPSSALFNRQPEWVIYHELVQTTKEYMREVTSIDPKWLVEFAPAFFKFSDPTKLSK 444
V+IHPSS LFN+ P +V+YHELV T KEY+R+ T I P+WL++ AP F +D K+SK
Sbjct: 1204 QVFIHPSSTLFNKNPLFVVYHELVLTNKEYIRDCTIIQPQWLIQLAPNLFIPADEKKISK 1263
Query: 445 FKKNQRLEPLYNKYEEPNAWRISREE 470
K +++EPL+N YEEPNAWR+SR +
Sbjct: 1264 IKLREKIEPLHNYYEEPNAWRLSRRK 1289
Score = 321 (118.1 bits), Expect = 5.3e-64, Sum P(2) = 5.3e-64
Identities = 63/105 (60%), Positives = 84/105 (80%)
Query: 245 LLKQAVKKRPEIKLIVTSATLDAVKFSSYFFEAPIFTIPGRTFPVEVLYTKEPETDYLDA 304
LLK V+KR + KLIVTSATLDA KFS+YFF +PIFTIPG+ FPVE+L++KEPE+DY++A
Sbjct: 766 LLKDVVRKRADFKLIVTSATLDAEKFSTYFFNSPIFTIPGKIFPVEILHSKEPESDYVEA 825
Query: 305 SLITVMQIHLREPPGDVLLFLTGKLDVRKQLLGIMDR-HKLDVVS 348
SLITV+ IHL E PGD+L+FLTG+ ++ + +R KL+ +S
Sbjct: 826 SLITVLNIHLNEHPGDILVFLTGQDEINTACEILHERMKKLESMS 870
Score = 270 (100.1 bits), Expect = 9.0e-20, P = 9.0e-20
Identities = 53/76 (69%), Positives = 64/76 (84%)
Query: 468 REEIDTACEILYERMKSL-GPDVPELIILPVYSALPSEMQTRIFEAAPPGSRKVVIATNI 526
++EI+TACEIL+ERMK L P LIILP+YS+LPSEMQ+ IFE APPG RK ++ATNI
Sbjct: 849 QDEINTACEILHERMKKLESMSPPPLIILPIYSSLPSEMQSVIFEPAPPGCRKCILATNI 908
Query: 527 AETSLTIDGIFYVVDP 542
AE SLTIDGIF+V+DP
Sbjct: 909 AEASLTIDGIFFVIDP 924
Score = 42 (19.8 bits), Expect = 3.5e-61, Sum P(2) = 3.5e-61
Identities = 8/11 (72%), Positives = 10/11 (90%)
Query: 1 MDSLVVTPISQ 11
MDSL+V PIS+
Sbjct: 938 MDSLIVAPISK 948
>UNIPROTKB|Q8IJA4 [details] [associations]
symbol:PF10_0294 "RNA helicase, putative" species:36329
"Plasmodium falciparum 3D7" [GO:0004004 "ATP-dependent RNA helicase
activity" evidence=ISS] [GO:0005575 "cellular_component"
evidence=ND] [GO:0008380 "RNA splicing" evidence=ISS]
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR003029
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF00575 Pfam:PF04408 PROSITE:PS00690 PROSITE:PS50126
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0008380 GO:GO:0003723 Gene3D:2.40.50.140 InterPro:IPR012340
SUPFAM:SSF50249 EMBL:AE014185 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717 GO:GO:0004004
HOGENOM:HOG000175261 InterPro:IPR022967 SMART:SM00316 KO:K12818
HSSP:P05055 RefSeq:XP_001347578.1 ProteinModelPortal:Q8IJA4
IntAct:Q8IJA4 MINT:MINT-1724156 EnsemblProtists:PF10_0294:mRNA
GeneID:810451 KEGG:pfa:PF10_0294 EuPathDB:PlasmoDB:PF3D7_1030100
OMA:HRHSKEH ProtClustDB:CLSZ2433181 Uniprot:Q8IJA4
Length = 1290
Score = 623 (224.4 bits), Expect = 3.5e-61, Sum P(2) = 3.5e-61
Identities = 116/228 (50%), Positives = 158/228 (69%)
Query: 11 QMAEFPLEPNLSKMLIMSVHLQCSDEVLTIVSMLSVQNVFYRPXXXXXXXXXXXXXFNQM 70
+MA FP+EPNLSK+L+ S++ C+D+V+TIVSMLSVQN+FYRP F
Sbjct: 1046 KMANFPMEPNLSKILLTSLNFNCTDDVVTIVSMLSVQNIFYRPQNKALLADKKKNKFIMP 1105
Query: 71 EGDHITLLAVYNSWRNNKFSNAWCYENFVQIRTLKRAQDVRKQLLGIMDRHKLDVV-SAG 129
+GD IT L +YN W+ N FSN WC+ENF+Q R LKRAQDVRKQ+L I +++ V S
Sbjct: 1106 QGDLITYLNIYNKWKENSFSNYWCHENFIQSRALKRAQDVRKQMLSIFEKYNYQVKKSTS 1165
Query: 130 KNT----VRVQKAVCSGFFRNAAKKDPQEGYRTLVDSQVVYIHPSSALFNRQPEWVIYHE 185
KN V + K++CSG+F + K+D Q+GY TL+ +Q V+IHPSS LFN+ P +V+YHE
Sbjct: 1166 KNDATKYVNICKSICSGYFNHVCKRDTQQGYTTLLTNQQVFIHPSSTLFNKNPLFVVYHE 1225
Query: 186 LVQTTKEYMREVTSIDPKWLVEFAPAFFKFSDPTKLSKFKKNQRLEPL 233
LV T KEY+R+ T I P+WL++ AP F +D K+SK K +++EPL
Sbjct: 1226 LVLTNKEYIRDCTIIQPQWLIQLAPNLFIPADEKKISKIKLREKIEPL 1273
Score = 394 (143.8 bits), Expect = 5.3e-64, Sum P(2) = 5.3e-64
Identities = 73/146 (50%), Positives = 103/146 (70%)
Query: 330 DVRKQLLGIMDRHKLDVV-SAGKNT----VRVQKAVCSGFFRNAAKKDPQEGYRTLVDSQ 384
DVRKQ+L I +++ V S KN V + K++CSG+F + K+D Q+GY TL+ +Q
Sbjct: 1144 DVRKQMLSIFEKYNYQVKKSTSKNDATKYVNICKSICSGYFNHVCKRDTQQGYTTLLTNQ 1203
Query: 385 VVYIHPSSALFNRQPEWVIYHELVQTTKEYMREVTSIDPKWLVEFAPAFFKFSDPTKLSK 444
V+IHPSS LFN+ P +V+YHELV T KEY+R+ T I P+WL++ AP F +D K+SK
Sbjct: 1204 QVFIHPSSTLFNKNPLFVVYHELVLTNKEYIRDCTIIQPQWLIQLAPNLFIPADEKKISK 1263
Query: 445 FKKNQRLEPLYNKYEEPNAWRISREE 470
K +++EPL+N YEEPNAWR+SR +
Sbjct: 1264 IKLREKIEPLHNYYEEPNAWRLSRRK 1289
Score = 321 (118.1 bits), Expect = 5.3e-64, Sum P(2) = 5.3e-64
Identities = 63/105 (60%), Positives = 84/105 (80%)
Query: 245 LLKQAVKKRPEIKLIVTSATLDAVKFSSYFFEAPIFTIPGRTFPVEVLYTKEPETDYLDA 304
LLK V+KR + KLIVTSATLDA KFS+YFF +PIFTIPG+ FPVE+L++KEPE+DY++A
Sbjct: 766 LLKDVVRKRADFKLIVTSATLDAEKFSTYFFNSPIFTIPGKIFPVEILHSKEPESDYVEA 825
Query: 305 SLITVMQIHLREPPGDVLLFLTGKLDVRKQLLGIMDR-HKLDVVS 348
SLITV+ IHL E PGD+L+FLTG+ ++ + +R KL+ +S
Sbjct: 826 SLITVLNIHLNEHPGDILVFLTGQDEINTACEILHERMKKLESMS 870
Score = 270 (100.1 bits), Expect = 9.0e-20, P = 9.0e-20
Identities = 53/76 (69%), Positives = 64/76 (84%)
Query: 468 REEIDTACEILYERMKSL-GPDVPELIILPVYSALPSEMQTRIFEAAPPGSRKVVIATNI 526
++EI+TACEIL+ERMK L P LIILP+YS+LPSEMQ+ IFE APPG RK ++ATNI
Sbjct: 849 QDEINTACEILHERMKKLESMSPPPLIILPIYSSLPSEMQSVIFEPAPPGCRKCILATNI 908
Query: 527 AETSLTIDGIFYVVDP 542
AE SLTIDGIF+V+DP
Sbjct: 909 AEASLTIDGIFFVIDP 924
Score = 42 (19.8 bits), Expect = 3.5e-61, Sum P(2) = 3.5e-61
Identities = 8/11 (72%), Positives = 10/11 (90%)
Query: 1 MDSLVVTPISQ 11
MDSL+V PIS+
Sbjct: 938 MDSLIVAPISK 948
>CGD|CAL0004768 [details] [associations]
symbol:PRP22 species:5476 "Candida albicans" [GO:0071007
"U2-type catalytic step 2 spliceosome" evidence=IEA] [GO:0071021
"U2-type post-spliceosomal complex" evidence=IEA] [GO:0000350
"generation of catalytic spliceosome for second transesterification
step" evidence=IEA] [GO:0000390 "spliceosomal complex disassembly"
evidence=IEA] [GO:0000386 "second spliceosomal transesterification
activity" evidence=IEA] [GO:0004004 "ATP-dependent RNA helicase
activity" evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR003029 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF00575 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS50126 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
CGD:CAL0004768 GO:GO:0005524 GO:GO:0003723 Gene3D:2.40.50.140
InterPro:IPR012340 SUPFAM:SSF50249 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 EMBL:AACQ01000012 InterPro:IPR022967 SMART:SM00316
KO:K12818 EMBL:AACQ01000011 RefSeq:XP_721941.1 RefSeq:XP_722102.1
ProteinModelPortal:Q5AJY8 STRING:Q5AJY8 GeneID:3636272
GeneID:3636404 KEGG:cal:CaO19.11516 KEGG:cal:CaO19.4033
Uniprot:Q5AJY8
Length = 996
Score = 579 (208.9 bits), Expect = 4.4e-57, Sum P(2) = 4.4e-57
Identities = 105/232 (45%), Positives = 156/232 (67%)
Query: 2 DSLVVTPISQMAEFPLEPNLSKMLIMSVHLQCSDEVLTIVSMLSVQNVFYRPXXXXXXXX 61
D + T +MA+ P+EP L+K LI SV +C++E+L+IV+MLSVQ +FYRP
Sbjct: 745 DGNLTTLGRKMADLPMEPALAKTLIQSVEYECTEEILSIVAMLSVQTIFYRPKDKQALAD 804
Query: 62 XXXXXFNQMEGDHITLLAVYNSWRNNKFSNAWCYENFVQIRTLKRAQDVRKQLLGIMDRH 121
F+ GDH+TLL V+ SW N +S WC +NF+Q R+++RA +VRKQL IM R
Sbjct: 805 QRKSRFHHSLGDHLTLLNVFQSWCRNNYSKTWCRDNFIQERSMRRAMEVRKQLKSIMQRF 864
Query: 122 KLDVVSAGKNTVRVQKAVCSGFFRNAAKKDPQEGYRTLVDSQVVYIHPSSALFNRQPEWV 181
+S G + RV++ CSG+F+N+AK+ EGY+TL ++ +VY+HPSS+L+ ++P++V
Sbjct: 865 GYKTMSCGNDVDRVRRTFCSGYFKNSAKRQEGEGYKTLNENTLVYLHPSSSLYGKKPQYV 924
Query: 182 IYHELVQTTKEYMREVTSIDPKWLVEFAPAFFKFSDPTKLSKFKKNQRLEPL 233
IYH L+ T+KEYM V+ IDP WL E AP +F+ +D + + KK Q++ PL
Sbjct: 925 IYHTLLLTSKEYMHCVSIIDPNWLYELAPKYFRPADAKTVQEIKKKQKIVPL 976
Score = 350 (128.3 bits), Expect = 2.0e-56, Sum P(2) = 2.0e-56
Identities = 62/139 (44%), Positives = 99/139 (71%)
Query: 329 LDVRKQLLGIMDRHKLDVVSAGKNTVRVQKAVCSGFFRNAAKKDPQEGYRTLVDSQVVYI 388
++VRKQL IM R +S G + RV++ CSG+F+N+AK+ EGY+TL ++ +VY+
Sbjct: 851 MEVRKQLKSIMQRFGYKTMSCGNDVDRVRRTFCSGYFKNSAKRQEGEGYKTLNENTLVYL 910
Query: 389 HPSSALFNRQPEWVIYHELVQTTKEYMREVTSIDPKWLVEFAPAFFKFSDPTKLSKFKKN 448
HPSS+L+ ++P++VIYH L+ T+KEYM V+ IDP WL E AP +F+ +D + + KK
Sbjct: 911 HPSSSLYGKKPQYVIYHTLLLTSKEYMHCVSIIDPNWLYELAPKYFRPADAKTVQEIKKK 970
Query: 449 QRLEPLYNKYEEPNAWRIS 467
Q++ PL+++ ++ N WR+S
Sbjct: 971 QKIVPLFSRQKKDN-WRLS 988
Score = 320 (117.7 bits), Expect = 8.2e-53, Sum P(2) = 8.2e-53
Identities = 60/80 (75%), Positives = 73/80 (91%)
Query: 468 REEIDTACEILYERMKSLGPDVPELIILPVYSALPSEMQTRIFEAAPPGSRKVVIATNIA 527
+EEI+T+CE L+ERMK LG ++PELIILPVYSALPSEMQTRIFE PPGSRKV++ATNIA
Sbjct: 558 QEEIETSCEALHERMKLLGENIPELIILPVYSALPSEMQTRIFEPTPPGSRKVILATNIA 617
Query: 528 ETSLTIDGIFYVVDPFDIEV 547
ETS+TIDGI+YVVDP +++
Sbjct: 618 ETSITIDGIYYVVDPGFVKI 637
Score = 306 (112.8 bits), Expect = 2.0e-56, Sum P(2) = 2.0e-56
Identities = 65/129 (50%), Positives = 86/129 (66%)
Query: 216 SDPTKLSKFKKNQRLEPLQRTNRISFPPGLLKQAVKKRPEIKLIVTSATLDAVKFSSYFF 275
+DP ++++ E +RT LLK A K+ P +K+IVTSATLD+ KFS YF
Sbjct: 447 NDPN-MNRYSVIMLDEAHERTIATDVLFALLKNAAKQNPNLKVIVTSATLDSNKFSRYFN 505
Query: 276 EAPIFTIPGRTFPVEVLYTKEPETDYLDASLITVMQIHLREPPGDVLLFLTGKLDVRKQL 335
PI TIPGRTFPVEVLYTK PE DYL A+L +V+QIH+ EP GD+L+FLTG+ ++
Sbjct: 506 NCPIITIPGRTFPVEVLYTKAPEMDYLAAALESVIQIHVSEPAGDILVFLTGQEEIETSC 565
Query: 336 LGIMDRHKL 344
+ +R KL
Sbjct: 566 EALHERMKL 574
Score = 41 (19.5 bits), Expect = 4.4e-57, Sum P(2) = 4.4e-57
Identities = 9/11 (81%), Positives = 10/11 (90%)
Query: 1 MDSLVVTPISQ 11
MDSL VTPIS+
Sbjct: 646 MDSLRVTPISK 656
>FB|FBgn0086444 [details] [associations]
symbol:l(2)37Cb "lethal (2) 37Cb" species:7227 "Drosophila
melanogaster" [GO:0000398 "mRNA splicing, via spliceosome"
evidence=IC;ISS] [GO:0005681 "spliceosomal complex" evidence=ISS]
[GO:0003724 "RNA helicase activity" evidence=ISS] [GO:0004004
"ATP-dependent RNA helicase activity" evidence=ISS] [GO:0003676
"nucleic acid binding" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0071011 "precatalytic spliceosome" evidence=IDA]
[GO:0071013 "catalytic step 2 spliceosome" evidence=IDA]
[GO:0022008 "neurogenesis" evidence=IMP] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
EMBL:AE014134 GO:GO:0022008 GO:GO:0003676 GO:GO:0071011
GO:GO:0000398 GO:GO:0071013 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
GO:GO:0004004 KO:K12813 GO:GO:0016779 GeneTree:ENSGT00700000104241
OMA:GTLHREF EMBL:AY061330 RefSeq:NP_609946.1 UniGene:Dm.468
SMR:Q9VIZ3 IntAct:Q9VIZ3 MINT:MINT-318410 STRING:Q9VIZ3
EnsemblMetazoa:FBtr0081163 GeneID:35192 KEGG:dme:Dmel_CG10689
UCSC:CG10689-RA FlyBase:FBgn0086444 InParanoid:Q9VIZ3
OrthoDB:EOG459ZWG GenomeRNAi:35192 NextBio:792305 Uniprot:Q9VIZ3
Length = 894
Score = 546 (197.3 bits), Expect = 4.7e-52, P = 4.7e-52
Identities = 99/205 (48%), Positives = 141/205 (68%)
Query: 11 QMAEFPLEPNLSKMLIMSVHLQCSDEVLTIVSMLSVQN-VFYRPXXXXXXXXXXXXXFNQ 69
+MAEFP++P + KML+ S +CS+E++TI +MLSV + +FYRP FN
Sbjct: 667 RMAEFPVDPMMGKMLLASEKYKCSEEMVTIAAMLSVNSAIFYRPKDKIIHADTARKNFNH 726
Query: 70 MEGDHITLLAVYNSWRNNKFSNAWCYENFVQIRTLKRAQDVRKQLLGIMDRHKLDVVSAG 129
M GDH++LL VYN W +S WCYENF+Q R++KRA+DVR+QL+G+M R ++D+VS
Sbjct: 727 MHGDHLSLLQVYNQWAETDYSTQWCYENFIQYRSMKRARDVREQLVGLMQRVEIDMVSCL 786
Query: 130 KNTVRVQKAVCSGFFRNAAKKDPQEGYRTLVDSQVVYIHPSSALFNRQPEWVIYHELVQT 189
TV V+KA +G+F + A+ Y+T+ +Q V IHP+S+LF P WV+YHELV T
Sbjct: 787 PETVNVRKAATAGYFYHVARLSKGGHYKTIKHNQTVMIHPNSSLFEELPRWVLYHELVFT 846
Query: 190 TKEYMREVTSIDPKWLVEFAPAFFK 214
+KEYMR+V I+ KWL+E AP ++K
Sbjct: 847 SKEYMRQVIEIESKWLLEVAPHYYK 871
Score = 285 (105.4 bits), Expect = 7.0e-46, Sum P(3) = 7.0e-46
Identities = 55/113 (48%), Positives = 79/113 (69%)
Query: 231 EPLQRTNRISFPPGLLKQAVKKRPEIKLIVTSATLDAVKFSSYFFEAPIFTIPGRTFPVE 290
E +RT GL+K + RPE+KL+++SATLDA KFS++F +APIF IPGR +PV+
Sbjct: 374 EAHERTLHTDILFGLVKDIARFRPELKLLISSATLDAEKFSAFFDDAPIFRIPGRRYPVD 433
Query: 291 VLYTKEPETDYLDASLITVMQIHLREPPGDVLLFLTGKLDVRKQLLGIMDRHK 343
+ YTK PE DY+DA ++V+QIH +P GD+L+FLTG+ ++ + DR K
Sbjct: 434 IFYTKAPEADYIDACCVSVLQIHATQPLGDILVFLTGQDEIETCQEVLHDRVK 486
Score = 280 (103.6 bits), Expect = 7.0e-46, Sum P(3) = 7.0e-46
Identities = 52/106 (49%), Positives = 75/106 (70%)
Query: 330 DVRKQLLGIMDRHKLDVVSAGKNTVRVQKAVCSGFFRNAAKKDPQEGYRTLVDSQVVYIH 389
DVR+QL+G+M R ++D+VS TV V+KA +G+F + A+ Y+T+ +Q V IH
Sbjct: 766 DVREQLVGLMQRVEIDMVSCLPETVNVRKAATAGYFYHVARLSKGGHYKTIKHNQTVMIH 825
Query: 390 PSSALFNRQPEWVIYHELVQTTKEYMREVTSIDPKWLVEFAPAFFK 435
P+S+LF P WV+YHELV T+KEYMR+V I+ KWL+E AP ++K
Sbjct: 826 PNSSLFEELPRWVLYHELVFTSKEYMRQVIEIESKWLLEVAPHYYK 871
Score = 250 (93.1 bits), Expect = 9.4e-43, Sum P(3) = 9.4e-43
Identities = 45/75 (60%), Positives = 62/75 (82%)
Query: 468 REEIDTACEILYERMKSLGPDVPELIILPVYSALPSEMQTRIFEAAPPGSRKVVIATNIA 527
++EI+T E+L++R+K LG + ELI++PVY+ LPS+MQ +IFE PP +RKV++ATNIA
Sbjct: 471 QDEIETCQEVLHDRVKRLGSKIRELIVIPVYANLPSDMQAKIFEPTPPNARKVILATNIA 530
Query: 528 ETSLTIDGIFYVVDP 542
ETSLTID I YV+DP
Sbjct: 531 ETSLTIDNIIYVIDP 545
Score = 40 (19.1 bits), Expect = 7.0e-46, Sum P(3) = 7.0e-46
Identities = 8/30 (26%), Positives = 16/30 (53%)
Query: 93 WCYENFVQIRTLKRAQDVRKQLLGIMDRHK 122
+ ++ V + K ++ +KQLL I H+
Sbjct: 111 YLFDESVLTKREKEEREYKKQLLNIAKEHE 140
>DICTYBASE|DDB_G0285937 [details] [associations]
symbol:dhx16 "putative RNA splicing factor"
species:44689 "Dictyostelium discoideum" [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0006397 "mRNA
processing" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0008380 "RNA splicing" evidence=IEA;ISS]
[GO:0005634 "nucleus" evidence=IEA;ISS] [GO:0003724 "RNA helicase
activity" evidence=ISS] [GO:0016787 "hydrolase activity"
evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR002483 InterPro:IPR003593 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF01480
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00382
SMART:SM00490 SMART:SM00847 dictyBase:DDB_G0285937 GO:GO:0005524
GO:GO:0005634 GenomeReviews:CM000153_GR GO:GO:0008380 GO:GO:0006397
GO:GO:0003676 EMBL:AAFI02000082 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 Gene3D:1.20.1390.10 KO:K12813 GO:GO:0003724
RefSeq:XP_638017.1 EnsemblProtists:DDB0233398 GeneID:8625368
KEGG:ddi:DDB_G0285937 OMA:YLLEREV Uniprot:Q54MH3
Length = 1106
Score = 526 (190.2 bits), Expect = 4.4e-51, Sum P(2) = 4.4e-51
Identities = 101/218 (46%), Positives = 141/218 (64%)
Query: 11 QMAEFPLEPNLSKMLIMSVHLQCSDEVLTIVSMLSVQN-VFYRPXXXXXXXXXXXXXFNQ 69
+MAEFP++P LSKM+I S +CS+E+LTI +MLSV N +FYRP F
Sbjct: 881 KMAEFPVDPQLSKMIIASEKYKCSEEILTICAMLSVGNTIFYRPKDKAFAADAARKLFFH 940
Query: 70 MEGDHITLLAVYNSWRNNKFSNAWCYENFVQIRTLKRAQDVRKQLLGIMDRHKLDVVSAG 129
+GDH+TL+ V+N WR + ++ WC+ENF+Q R++KRAQDVR QL +++R ++ +VS
Sbjct: 941 PQGDHLTLMNVFNQWRESGYAVQWCFENFIQHRSMKRAQDVRDQLELLLERVEIPLVSNV 1000
Query: 130 KNTVRVQKAVCSGFFRNAAKKDPQEGYRTLVDSQVVYIHPSSALFNRQPEWVIYHELVQT 189
+T ++K + SGFF N+AK + +RT +Q V IHPSS LF P+WV+YHELV T
Sbjct: 1001 DDTDSIRKCIASGFFYNSAKLEKSGLFRTTKHNQSVQIHPSSCLFQSPPKWVVYHELVLT 1060
Query: 190 TKEYMREVTSIDPKWLVEFAPAFFKFSDPTKLSKFKKN 227
TKE+MR++ I WL E AP +K D K KN
Sbjct: 1061 TKEFMRQIVEIQSSWLHEIAPHIYKEKDVNDNQKLPKN 1098
Score = 271 (100.5 bits), Expect = 2.1e-42, Sum P(2) = 2.1e-42
Identities = 52/101 (51%), Positives = 72/101 (71%)
Query: 231 EPLQRTNRISFPPGLLKQAVKKRPEIKLIVTSATLDAVKFSSYFFEAPIFTIPGRTFPVE 290
E +RT GLLK + RP++KL+++SAT+DA +FS YF AP F IPGR + V
Sbjct: 588 EAHERTLHTDILFGLLKDITRFRPDLKLLISSATMDAERFSDYFDGAPTFNIPGRKYEVT 647
Query: 291 VLYTKEPETDYLDASLITVMQIHLREPPGDVLLFLTGKLDV 331
YT+ PE DYLDA+++TV+QIH+ EP GD+L+FLTG+ +V
Sbjct: 648 THYTQAPEADYLDAAVVTVLQIHITEPLGDILVFLTGQEEV 688
Score = 262 (97.3 bits), Expect = 2.1e-42, Sum P(2) = 2.1e-42
Identities = 53/119 (44%), Positives = 73/119 (61%)
Query: 330 DVRKQLLGIMDRHKLDVVSAGKNTVRVQKAVCSGFFRNAAKKDPQEGYRTLVDSQVVYIH 389
DVR QL +++R ++ +VS +T ++K + SGFF N+AK + +RT +Q V IH
Sbjct: 980 DVRDQLELLLERVEIPLVSNVDDTDSIRKCIASGFFYNSAKLEKSGLFRTTKHNQSVQIH 1039
Query: 390 PSSALFNRQPEWVIYHELVQTTKEYMREVTSIDPKWLVEFAPAFFKFSDPTKLSKFKKN 448
PSS LF P+WV+YHELV TTKE+MR++ I WL E AP +K D K KN
Sbjct: 1040 PSSCLFQSPPKWVVYHELVLTTKEFMRQIVEIQSSWLHEIAPHIYKEKDVNDNQKLPKN 1098
Score = 240 (89.5 bits), Expect = 4.4e-40, Sum P(2) = 4.4e-40
Identities = 45/75 (60%), Positives = 58/75 (77%)
Query: 468 REEIDTACEILYERMKSLGPDVPELIILPVYSALPSEMQTRIFEAAPPGSRKVVIATNIA 527
+EE+D A E+L R + LG + ELII +YS LP+++Q +IFE PP +RKVV+ATNIA
Sbjct: 685 QEEVDQAAEMLQTRTRGLGTKIKELIITRIYSTLPTDLQAKIFEPTPPNARKVVLATNIA 744
Query: 528 ETSLTIDGIFYVVDP 542
ETSLTIDGI YV+DP
Sbjct: 745 ETSLTIDGIIYVIDP 759
Score = 42 (19.8 bits), Expect = 4.4e-51, Sum P(2) = 4.4e-51
Identities = 7/11 (63%), Positives = 11/11 (100%)
Query: 1 MDSLVVTPISQ 11
M+SLV+TP+S+
Sbjct: 773 MESLVITPVSR 783
>TAIR|locus:2033723 [details] [associations]
symbol:ESP3 "ENHANCED SILENCING PHENOTYPE 3" species:3702
"Arabidopsis thaliana" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0004004 "ATP-dependent RNA helicase activity"
evidence=ISS] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=ISM] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0009793 "embryo development ending in seed
dormancy" evidence=NAS] [GO:0008380 "RNA splicing" evidence=NAS]
[GO:0035194 "posttranscriptional gene silencing by RNA"
evidence=IMP] [GO:0016020 "membrane" evidence=IDA] [GO:0006306 "DNA
methylation" evidence=RCA] [GO:0006342 "chromatin silencing"
evidence=RCA] [GO:0007267 "cell-cell signaling" evidence=RCA]
[GO:0009616 "virus induced gene silencing" evidence=RCA]
[GO:0010267 "production of ta-siRNAs involved in RNA interference"
evidence=RCA] [GO:0035196 "production of miRNAs involved in gene
silencing by miRNA" evidence=RCA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005524 GO:GO:0008380 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026 HOGENOM:HOG000175261
KO:K12813 GO:GO:0035194 OMA:GTLHREF EMBL:AY074318 EMBL:AY133872
IPI:IPI00543041 RefSeq:NP_174527.2 UniGene:At.40132
ProteinModelPortal:Q8VY00 IntAct:Q8VY00 PaxDb:Q8VY00 PRIDE:Q8VY00
EnsemblPlants:AT1G32490.1 GeneID:840143 KEGG:ath:AT1G32490
TAIR:At1g32490 InParanoid:Q8VY00 PhylomeDB:Q8VY00
ProtClustDB:CLSN2685836 ArrayExpress:Q8VY00 Genevestigator:Q8VY00
Uniprot:Q8VY00
Length = 1044
Score = 525 (189.9 bits), Expect = 6.6e-51, Sum P(2) = 6.6e-51
Identities = 95/209 (45%), Positives = 141/209 (67%)
Query: 11 QMAEFPLEPNLSKMLIMSVHLQCSDEVLTIVSMLSVQ-NVFYRPXXXXXXXXXXXXXFNQ 69
+MAEFPL+P LSKM+++S +CSDE+++I +MLS+ ++FYRP F+
Sbjct: 818 RMAEFPLDPMLSKMIVVSDKYKCSDEIISIAAMLSIGGSIFYRPKDKQVHADNARMNFHT 877
Query: 70 ME-GDHITLLAVYNSWRNNKFSNAWCYENFVQIRTLKRAQDVRKQLLGIMDRHKLDVVSA 128
GDHI LL VY+SW+ FS WCYEN++Q+R++KRA+D+R QL G+++R ++D+ S
Sbjct: 878 GNVGDHIALLKVYSSWKETNFSTQWCYENYIQVRSMKRARDIRDQLEGLLERVEIDISSN 937
Query: 129 GKNTVRVQKAVCSGFFRNAAKKDPQEGYRTLVDSQVVYIHPSSALFNRQPEWVIYHELVQ 188
V+K++ +GFF + AK YRT+ Q V+IHP+S L P WV+YHELV
Sbjct: 938 LNELDSVRKSIVAGFFPHTAKLQKNGSYRTVKHPQTVHIHPNSGLSQVLPRWVVYHELVL 997
Query: 189 TTKEYMREVTSIDPKWLVEFAPAFFKFSD 217
T+KEYMR+VT + P+WL+E AP +++ D
Sbjct: 998 TSKEYMRQVTELKPEWLIELAPHYYQLKD 1026
Score = 281 (104.0 bits), Expect = 5.0e-44, Sum P(2) = 5.0e-44
Identities = 50/101 (49%), Positives = 74/101 (73%)
Query: 231 EPLQRTNRISFPPGLLKQAVKKRPEIKLIVTSATLDAVKFSSYFFEAPIFTIPGRTFPVE 290
E +RT GL+K + RP++KL+++SAT+DA KFS YF APIF+ PGR +PVE
Sbjct: 525 EAHERTLSTDILFGLVKDIARFRPDLKLLISSATMDAEKFSDYFDTAPIFSFPGRRYPVE 584
Query: 291 VLYTKEPETDYLDASLITVMQIHLREPPGDVLLFLTGKLDV 331
+ YT PE DY+DA+++T++ IH+REP GD+L+F TG+ ++
Sbjct: 585 INYTSAPEADYMDAAIVTILTIHVREPLGDILVFFTGQEEI 625
Score = 266 (98.7 bits), Expect = 5.0e-44, Sum P(2) = 5.0e-44
Identities = 48/109 (44%), Positives = 72/109 (66%)
Query: 330 DVRKQLLGIMDRHKLDVVSAGKNTVRVQKAVCSGFFRNAAKKDPQEGYRTLVDSQVVYIH 389
D+R QL G+++R ++D+ S V+K++ +GFF + AK YRT+ Q V+IH
Sbjct: 918 DIRDQLEGLLERVEIDISSNLNELDSVRKSIVAGFFPHTAKLQKNGSYRTVKHPQTVHIH 977
Query: 390 PSSALFNRQPEWVIYHELVQTTKEYMREVTSIDPKWLVEFAPAFFKFSD 438
P+S L P WV+YHELV T+KEYMR+VT + P+WL+E AP +++ D
Sbjct: 978 PNSGLSQVLPRWVVYHELVLTSKEYMRQVTELKPEWLIELAPHYYQLKD 1026
Score = 249 (92.7 bits), Expect = 3.1e-42, Sum P(2) = 3.1e-42
Identities = 50/75 (66%), Positives = 61/75 (81%)
Query: 468 REEIDTACEILYERMKSLGPDVPELIILPVYSALPSEMQTRIFEAAPPGSRKVVIATNIA 527
+EEI+TA EIL R++ LG + ELII P+Y+ LPSE+Q +IFE P G+RKVV+ATNIA
Sbjct: 622 QEEIETAEEILKHRIRGLGTKIRELIICPIYANLPSELQAKIFEPTPEGARKVVLATNIA 681
Query: 528 ETSLTIDGIFYVVDP 542
ETSLTIDGI YVVDP
Sbjct: 682 ETSLTIDGIKYVVDP 696
Score = 40 (19.1 bits), Expect = 6.6e-51, Sum P(2) = 6.6e-51
Identities = 7/11 (63%), Positives = 11/11 (100%)
Query: 1 MDSLVVTPISQ 11
M+SL++TPIS+
Sbjct: 710 MESLLITPISK 720
>TAIR|locus:2062492 [details] [associations]
symbol:MEE29 "maternal effect embryo arrest 29"
species:3702 "Arabidopsis thaliana" [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0004004 "ATP-dependent RNA helicase
activity" evidence=ISS] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=ISM] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0009793 "embryo development ending in
seed dormancy" evidence=IMP] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR003593 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00382 SMART:SM00490 SMART:SM00847
GO:GO:0005524 EMBL:CP002685 GO:GO:0003676 GO:GO:0009793
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 OMA:RIDDHRD IPI:IPI00520097
RefSeq:NP_181077.3 UniGene:At.53041 ProteinModelPortal:F4IJV4
SMR:F4IJV4 PRIDE:F4IJV4 EnsemblPlants:AT2G35340.1 GeneID:818101
KEGG:ath:AT2G35340 Uniprot:F4IJV4
Length = 1044
Score = 523 (189.2 bits), Expect = 8.5e-51, Sum P(2) = 8.5e-51
Identities = 92/209 (44%), Positives = 140/209 (66%)
Query: 11 QMAEFPLEPNLSKMLIMSVHLQCSDEVLTIVSMLSV-QNVFYRPXXXXXXXXXXXXXFNQ 69
+MAEFPL+P LSKM+++S +CSDE+++I +MLS+ ++FYRP F+
Sbjct: 818 RMAEFPLDPMLSKMIVVSDKYKCSDEIISIAAMLSIGPSIFYRPKDKQVHADNAMKNFHV 877
Query: 70 ME-GDHITLLAVYNSWRNNKFSNAWCYENFVQIRTLKRAQDVRKQLLGIMDRHKLDVVSA 128
GDHI L +YNSW+ +S WCYEN++Q+R++KRA+D+R QL G+++R ++DV S
Sbjct: 878 GNVGDHIAFLKIYNSWKETNYSTQWCYENYIQVRSMKRARDIRDQLEGLLERVEIDVSSN 937
Query: 129 GKNTVRVQKAVCSGFFRNAAKKDPQEGYRTLVDSQVVYIHPSSALFNRQPEWVIYHELVQ 188
++K++ +GFF + AK YRT+ Q V+IHP+S L P WV+YH+LV
Sbjct: 938 ANELDSIRKSIVAGFFPHTAKLQKNGSYRTVKHPQTVHIHPASGLSQVLPRWVVYHQLVL 997
Query: 189 TTKEYMREVTSIDPKWLVEFAPAFFKFSD 217
T+KEYMR+VT + P+WL+E AP +++ D
Sbjct: 998 TSKEYMRQVTELKPEWLIEIAPHYYQLKD 1026
Score = 273 (101.2 bits), Expect = 3.2e-43, Sum P(2) = 3.2e-43
Identities = 49/101 (48%), Positives = 74/101 (73%)
Query: 231 EPLQRTNRISFPPGLLKQAVKKRPEIKLIVTSATLDAVKFSSYFFEAPIFTIPGRTFPVE 290
E +RT R GL+K + RP++KL+++SAT+DA KFS +F +APIF PGR +PV+
Sbjct: 525 EAHERTLRTDILFGLVKDIARARPDLKLLISSATMDAEKFSDFFDQAPIFRFPGRRYPVD 584
Query: 291 VLYTKEPETDYLDASLITVMQIHLREPPGDVLLFLTGKLDV 331
+ +T PE DY+DA++ TV+ IH++EP GDVL+FL G+ ++
Sbjct: 585 ICFTTAPEADYMDAAITTVLTIHVKEPLGDVLVFLPGQEEI 625
Score = 267 (99.0 bits), Expect = 3.2e-43, Sum P(2) = 3.2e-43
Identities = 47/109 (43%), Positives = 72/109 (66%)
Query: 330 DVRKQLLGIMDRHKLDVVSAGKNTVRVQKAVCSGFFRNAAKKDPQEGYRTLVDSQVVYIH 389
D+R QL G+++R ++DV S ++K++ +GFF + AK YRT+ Q V+IH
Sbjct: 918 DIRDQLEGLLERVEIDVSSNANELDSIRKSIVAGFFPHTAKLQKNGSYRTVKHPQTVHIH 977
Query: 390 PSSALFNRQPEWVIYHELVQTTKEYMREVTSIDPKWLVEFAPAFFKFSD 438
P+S L P WV+YH+LV T+KEYMR+VT + P+WL+E AP +++ D
Sbjct: 978 PASGLSQVLPRWVVYHQLVLTSKEYMRQVTELKPEWLIEIAPHYYQLKD 1026
Score = 230 (86.0 bits), Expect = 2.4e-39, Sum P(2) = 2.4e-39
Identities = 46/75 (61%), Positives = 58/75 (77%)
Query: 468 REEIDTACEILYERMKSLGPDVPELIILPVYSALPSEMQTRIFEAAPPGSRKVVIATNIA 527
+EEI+ E L +++ LG + ELII P+Y+ LPSE+Q +IFE P G+RKVV+ATNIA
Sbjct: 622 QEEIEAVEENLKHKIRGLGTKIRELIICPIYANLPSELQAKIFEPTPEGARKVVLATNIA 681
Query: 528 ETSLTIDGIFYVVDP 542
ETSLTIDGI YVVDP
Sbjct: 682 ETSLTIDGIKYVVDP 696
Score = 41 (19.5 bits), Expect = 8.5e-51, Sum P(2) = 8.5e-51
Identities = 8/11 (72%), Positives = 11/11 (100%)
Query: 1 MDSLVVTPISQ 11
M+SL+VTPIS+
Sbjct: 710 MESLLVTPISK 720
>ZFIN|ZDB-GENE-030131-8589 [details] [associations]
symbol:dhx16 "DEAH (Asp-Glu-Ala-His) box
polypeptide 16" species:7955 "Danio rerio" [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0035987
"endodermal cell differentiation" evidence=IMP] [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 ZFIN:ZDB-GENE-030131-8589 GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026 HOGENOM:HOG000175261
KO:K12813 HOVERGEN:HBG039428 CTD:8449 OrthoDB:EOG4VHK5Q
GO:GO:0035987 EMBL:BC045393 IPI:IPI00495801 RefSeq:NP_956318.1
UniGene:Dr.76186 ProteinModelPortal:Q7ZVV8 STRING:Q7ZVV8
PRIDE:Q7ZVV8 GeneID:336645 KEGG:dre:336645 InParanoid:Q7ZVV8
NextBio:20811846 ArrayExpress:Q7ZVV8 Bgee:Q7ZVV8 Uniprot:Q7ZVV8
Length = 1054
Score = 518 (187.4 bits), Expect = 6.5e-50, Sum P(2) = 6.5e-50
Identities = 96/205 (46%), Positives = 141/205 (68%)
Query: 11 QMAEFPLEPNLSKMLIMSVHLQCSDEVLTIVSMLSVQN-VFYRPXXXXXXXXXXXXXFNQ 69
+MAE P++P LSKM++ S +CS+EVLTI +MLSV N +FYRP F
Sbjct: 827 RMAELPVDPMLSKMILASEQYKCSEEVLTIAAMLSVNNSIFYRPKDKVVHADNARMNFVV 886
Query: 70 MEGDHITLLAVYNSWRNNKFSNAWCYENFVQIRTLKRAQDVRKQLLGIMDRHKLDVVSAG 129
GDH+ LL VY W + +S WC+ENF+Q R++KRA+DVR QL G+MDR ++++ S+
Sbjct: 887 PGGDHLVLLNVYTQWVESGYSTQWCFENFIQFRSMKRARDVRDQLEGLMDRIEVELCSSN 946
Query: 130 KNTVRVQKAVCSGFFRNAAKKDPQEGYRTLVDSQVVYIHPSSALFNRQPEWVIYHELVQT 189
+++ ++KAV +G+F + A+ + GY+T+ Q VY+HP+S+LF QP W+IYHELV T
Sbjct: 947 GDSMPIRKAVTAGYFYHTARLS-KGGYKTVKHQQTVYVHPNSSLFEEQPRWMIYHELVFT 1005
Query: 190 TKEYMREVTSIDPKWLVEFAPAFFK 214
TKE+MR+V I+ WL+E AP ++K
Sbjct: 1006 TKEFMRQVIEIESGWLLEVAPHYYK 1030
Score = 282 (104.3 bits), Expect = 3.5e-45, Sum P(2) = 3.5e-45
Identities = 51/101 (50%), Positives = 75/101 (74%)
Query: 231 EPLQRTNRISFPPGLLKQAVKKRPEIKLIVTSATLDAVKFSSYFFEAPIFTIPGRTFPVE 290
E +RT GL+K + RP++K++V SATLD +FSS+F +AP+F IPGR FPV+
Sbjct: 534 EAHERTLHTDILFGLIKDIARFRPDLKVLVASATLDTERFSSFFDDAPVFRIPGRRFPVD 593
Query: 291 VLYTKEPETDYLDASLITVMQIHLREPPGDVLLFLTGKLDV 331
+ YTK PE DYL+A +++V+QIH+ + PGDVL+FLTG+ ++
Sbjct: 594 IYYTKAPEADYLEACVVSVLQIHVTQSPGDVLVFLTGQEEI 634
Score = 276 (102.2 bits), Expect = 3.5e-45, Sum P(2) = 3.5e-45
Identities = 50/106 (47%), Positives = 78/106 (73%)
Query: 330 DVRKQLLGIMDRHKLDVVSAGKNTVRVQKAVCSGFFRNAAKKDPQEGYRTLVDSQVVYIH 389
DVR QL G+MDR ++++ S+ +++ ++KAV +G+F + A+ + GY+T+ Q VY+H
Sbjct: 926 DVRDQLEGLMDRIEVELCSSNGDSMPIRKAVTAGYFYHTARLS-KGGYKTVKHQQTVYVH 984
Query: 390 PSSALFNRQPEWVIYHELVQTTKEYMREVTSIDPKWLVEFAPAFFK 435
P+S+LF QP W+IYHELV TTKE+MR+V I+ WL+E AP ++K
Sbjct: 985 PNSSLFEEQPRWMIYHELVFTTKEFMRQVIEIESGWLLEVAPHYYK 1030
Score = 263 (97.6 bits), Expect = 8.1e-44, Sum P(2) = 8.1e-44
Identities = 47/75 (62%), Positives = 61/75 (81%)
Query: 468 REEIDTACEILYERMKSLGPDVPELIILPVYSALPSEMQTRIFEAAPPGSRKVVIATNIA 527
+EEI+ CE+L ER + LG + EL++LP+Y+ LPS+MQ +IF PPG+RKVV+ATNIA
Sbjct: 631 QEEIEACCELLQERCRRLGSKISELLVLPIYANLPSDMQAKIFNPTPPGARKVVVATNIA 690
Query: 528 ETSLTIDGIFYVVDP 542
ETSLTIDGI YV+DP
Sbjct: 691 ETSLTIDGIIYVIDP 705
Score = 38 (18.4 bits), Expect = 6.5e-50, Sum P(2) = 6.5e-50
Identities = 7/11 (63%), Positives = 10/11 (90%)
Query: 1 MDSLVVTPISQ 11
M+SL+VTP S+
Sbjct: 719 MESLIVTPCSR 729
Score = 38 (18.4 bits), Expect = 3.0e-20, Sum P(2) = 3.0e-20
Identities = 10/38 (26%), Positives = 17/38 (44%)
Query: 441 KLSKFKKNQRLEPLYNKYEEPNAWRISREEIDTACEIL 478
K K ++ + P + +EE W I E + T E +
Sbjct: 973 KTVKHQQTVYVHPNSSLFEEQPRWMIYHELVFTTKEFM 1010
>UNIPROTKB|Q5SQH5 [details] [associations]
symbol:DHX16 "Putative pre-mRNA-splicing factor
ATP-dependent RNA helicase DHX16" species:9606 "Homo sapiens"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
EMBL:CH471081 GO:GO:0003676 EMBL:BX119957 EMBL:CR753328
EMBL:CR759778 EMBL:AL732442 EMBL:BX908728 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 HOGENOM:HOG000175261 HOVERGEN:HBG039428
UniGene:Hs.485060 HGNC:HGNC:2739 EMBL:CR788240 EMBL:AL662798
EMBL:CU013522 IPI:IPI00644906 SMR:Q5SQH5 Ensembl:ENST00000376437
Ensembl:ENST00000414052 Ensembl:ENST00000445379
Ensembl:ENST00000449861 Ensembl:ENST00000451748
Ensembl:ENST00000453879 UCSC:uc003nqy.3 Uniprot:Q5SQH5
Length = 560
Score = 517 (187.1 bits), Expect = 1.2e-49, P = 1.2e-49
Identities = 94/205 (45%), Positives = 141/205 (68%)
Query: 11 QMAEFPLEPNLSKMLIMSVHLQCSDEVLTIVSMLSVQN-VFYRPXXXXXXXXXXXXXFNQ 69
+MAE P++P LSKM++ S CS+E+LT+ +MLSV N +FYRP F
Sbjct: 333 KMAELPVDPMLSKMILASEKYSCSEEILTVAAMLSVNNSIFYRPKDKVVHADNARVNFFL 392
Query: 70 MEGDHITLLAVYNSWRNNKFSNAWCYENFVQIRTLKRAQDVRKQLLGIMDRHKLDVVSAG 129
GDH+ LL VY W + +S+ WCYENFVQ R+++RA+DVR+QL G+++R ++ + S
Sbjct: 393 PGGDHLVLLNVYTQWAESGYSSQWCYENFVQFRSMRRARDVREQLEGLLERVEVGLSSCQ 452
Query: 130 KNTVRVQKAVCSGFFRNAAKKDPQEGYRTLVDSQVVYIHPSSALFNRQPEWVIYHELVQT 189
+ +RV+KA+ +G+F + A+ + GYRT+ Q V+IHP+S+LF +QP W++YHELV T
Sbjct: 453 GDYIRVRKAITAGYFYHTARLT-RSGYRTVKQQQTVFIHPNSSLFEQQPRWLLYHELVLT 511
Query: 190 TKEYMREVTSIDPKWLVEFAPAFFK 214
TKE+MR+V I+ WL+E AP ++K
Sbjct: 512 TKEFMRQVLEIESSWLLEVAPHYYK 536
Score = 295 (108.9 bits), Expect = 1.1e-47, Sum P(2) = 1.1e-47
Identities = 52/111 (46%), Positives = 79/111 (71%)
Query: 231 EPLQRTNRISFPPGLLKQAVKKRPEIKLIVTSATLDAVKFSSYFFEAPIFTIPGRTFPVE 290
E +RT GL+K + RPE+K++V SAT+D +FS++F +AP+F IPGR FPV+
Sbjct: 40 EAHERTLHTDILFGLIKDVARFRPELKVLVASATMDTARFSTFFDDAPVFRIPGRRFPVD 99
Query: 291 VLYTKEPETDYLDASLITVMQIHLREPPGDVLLFLTGKLDVRKQLLGIMDR 341
+ YTK PE DYL+A +++V+QIH+ +PPGD+L+FLTG+ ++ + DR
Sbjct: 100 IFYTKAPEADYLEACVVSVLQIHVTQPPGDILVFLTGQEEIEAACEMLQDR 150
Score = 274 (101.5 bits), Expect = 1.1e-47, Sum P(2) = 1.1e-47
Identities = 49/106 (46%), Positives = 78/106 (73%)
Query: 330 DVRKQLLGIMDRHKLDVVSAGKNTVRVQKAVCSGFFRNAAKKDPQEGYRTLVDSQVVYIH 389
DVR+QL G+++R ++ + S + +RV+KA+ +G+F + A+ + GYRT+ Q V+IH
Sbjct: 432 DVREQLEGLLERVEVGLSSCQGDYIRVRKAITAGYFYHTARLT-RSGYRTVKQQQTVFIH 490
Query: 390 PSSALFNRQPEWVIYHELVQTTKEYMREVTSIDPKWLVEFAPAFFK 435
P+S+LF +QP W++YHELV TTKE+MR+V I+ WL+E AP ++K
Sbjct: 491 PNSSLFEQQPRWLLYHELVLTTKEFMRQVLEIESSWLLEVAPHYYK 536
Score = 261 (96.9 bits), Expect = 2.7e-46, Sum P(2) = 2.7e-46
Identities = 47/75 (62%), Positives = 63/75 (84%)
Query: 468 REEIDTACEILYERMKSLGPDVPELIILPVYSALPSEMQTRIFEAAPPGSRKVVIATNIA 527
+EEI+ ACE+L +R + LG + EL++LP+Y+ LPS+MQ RIF+ PPG+RKVV+ATNIA
Sbjct: 137 QEEIEAACEMLQDRCRRLGSKIRELLVLPIYANLPSDMQARIFQPTPPGARKVVVATNIA 196
Query: 528 ETSLTIDGIFYVVDP 542
ETSLTI+GI YV+DP
Sbjct: 197 ETSLTIEGIIYVLDP 211
Score = 37 (18.1 bits), Expect = 8.1e-23, Sum P(2) = 8.1e-23
Identities = 7/17 (41%), Positives = 8/17 (47%)
Query: 395 FNRQPEWVIYHELVQTT 411
F W HEL +TT
Sbjct: 254 FRLYTAWAYQHELEETT 270
Score = 37 (18.1 bits), Expect = 2.4e-20, Sum P(2) = 2.4e-20
Identities = 7/17 (41%), Positives = 8/17 (47%)
Query: 174 FNRQPEWVIYHELVQTT 190
F W HEL +TT
Sbjct: 254 FRLYTAWAYQHELEETT 270
>UNIPROTKB|Q5JP46 [details] [associations]
symbol:DHX16 "Putative pre-mRNA-splicing factor
ATP-dependent RNA helicase DHX16" species:9606 "Homo sapiens"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0003676 EMBL:AL845353 eggNOG:COG1643 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 HOVERGEN:HBG039428 UniGene:Hs.485060
HGNC:HGNC:2739 IPI:IPI00292510 SMR:Q5JP46 Ensembl:ENST00000383576
UCSC:uc011ijt.2 Uniprot:Q5JP46
Length = 560
Score = 517 (187.1 bits), Expect = 1.2e-49, P = 1.2e-49
Identities = 94/205 (45%), Positives = 141/205 (68%)
Query: 11 QMAEFPLEPNLSKMLIMSVHLQCSDEVLTIVSMLSVQN-VFYRPXXXXXXXXXXXXXFNQ 69
+MAE P++P LSKM++ S CS+E+LT+ +MLSV N +FYRP F
Sbjct: 333 KMAELPVDPMLSKMILASEKYSCSEEILTVAAMLSVNNSIFYRPKDKVVHADNARVNFFL 392
Query: 70 MEGDHITLLAVYNSWRNNKFSNAWCYENFVQIRTLKRAQDVRKQLLGIMDRHKLDVVSAG 129
GDH+ LL VY W + +S+ WCYENFVQ R+++RA+DVR+QL G+++R ++ + S
Sbjct: 393 PGGDHLVLLNVYTQWAESGYSSQWCYENFVQFRSMRRARDVREQLEGLLERVEVGLSSCQ 452
Query: 130 KNTVRVQKAVCSGFFRNAAKKDPQEGYRTLVDSQVVYIHPSSALFNRQPEWVIYHELVQT 189
+ +RV+KA+ +G+F + A+ + GYRT+ Q V+IHP+S+LF +QP W++YHELV T
Sbjct: 453 GDYIRVRKAITAGYFYHTARLT-RSGYRTVKQQQTVFIHPNSSLFEQQPRWLLYHELVLT 511
Query: 190 TKEYMREVTSIDPKWLVEFAPAFFK 214
TKE+MR+V I+ WL+E AP ++K
Sbjct: 512 TKEFMRQVLEIESSWLLEVAPHYYK 536
Score = 291 (107.5 bits), Expect = 3.4e-47, Sum P(2) = 3.4e-47
Identities = 52/111 (46%), Positives = 78/111 (70%)
Query: 231 EPLQRTNRISFPPGLLKQAVKKRPEIKLIVTSATLDAVKFSSYFFEAPIFTIPGRTFPVE 290
E +RT GL+K + RPE+K++V SAT+D +FS++F AP+F IPGR FPV+
Sbjct: 40 EAHERTLHTDILFGLIKDVARFRPELKVLVASATMDTARFSTFFDGAPVFRIPGRRFPVD 99
Query: 291 VLYTKEPETDYLDASLITVMQIHLREPPGDVLLFLTGKLDVRKQLLGIMDR 341
+ YTK PE DYL+A +++V+QIH+ +PPGD+L+FLTG+ ++ + DR
Sbjct: 100 IFYTKAPEADYLEACVVSVLQIHVTQPPGDILVFLTGQEEIEAACEMLQDR 150
Score = 274 (101.5 bits), Expect = 3.4e-47, Sum P(2) = 3.4e-47
Identities = 49/106 (46%), Positives = 78/106 (73%)
Query: 330 DVRKQLLGIMDRHKLDVVSAGKNTVRVQKAVCSGFFRNAAKKDPQEGYRTLVDSQVVYIH 389
DVR+QL G+++R ++ + S + +RV+KA+ +G+F + A+ + GYRT+ Q V+IH
Sbjct: 432 DVREQLEGLLERVEVGLSSCQGDYIRVRKAITAGYFYHTARLT-RSGYRTVKQQQTVFIH 490
Query: 390 PSSALFNRQPEWVIYHELVQTTKEYMREVTSIDPKWLVEFAPAFFK 435
P+S+LF +QP W++YHELV TTKE+MR+V I+ WL+E AP ++K
Sbjct: 491 PNSSLFEQQPRWLLYHELVLTTKEFMRQVLEIESSWLLEVAPHYYK 536
Score = 261 (96.9 bits), Expect = 8.0e-46, Sum P(2) = 8.0e-46
Identities = 47/75 (62%), Positives = 63/75 (84%)
Query: 468 REEIDTACEILYERMKSLGPDVPELIILPVYSALPSEMQTRIFEAAPPGSRKVVIATNIA 527
+EEI+ ACE+L +R + LG + EL++LP+Y+ LPS+MQ RIF+ PPG+RKVV+ATNIA
Sbjct: 137 QEEIEAACEMLQDRCRRLGSKIRELLVLPIYANLPSDMQARIFQPTPPGARKVVVATNIA 196
Query: 528 ETSLTIDGIFYVVDP 542
ETSLTI+GI YV+DP
Sbjct: 197 ETSLTIEGIIYVLDP 211
Score = 37 (18.1 bits), Expect = 2.4e-22, Sum P(2) = 2.4e-22
Identities = 7/17 (41%), Positives = 8/17 (47%)
Query: 395 FNRQPEWVIYHELVQTT 411
F W HEL +TT
Sbjct: 254 FRLYTAWAYQHELEETT 270
Score = 37 (18.1 bits), Expect = 2.4e-20, Sum P(2) = 2.4e-20
Identities = 7/17 (41%), Positives = 8/17 (47%)
Query: 174 FNRQPEWVIYHELVQTT 190
F W HEL +TT
Sbjct: 254 FRLYTAWAYQHELEETT 270
>RGD|1302963 [details] [associations]
symbol:Dhx16 "DEAH (Asp-Glu-Ala-His) box polypeptide 16"
species:10116 "Rattus norvegicus" [GO:0005634 "nucleus"
evidence=ISO] [GO:0005730 "nucleolus" evidence=ISO]
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408
PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
RGD:1302963 GO:GO:0005524 GO:GO:0003676 EMBL:BX883048
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026 KO:K12813
HOVERGEN:HBG039428 CTD:8449 EMBL:CH474118 IPI:IPI00421973
RefSeq:NP_997661.1 UniGene:Rn.6832 GeneID:294232 KEGG:rno:294232
UCSC:RGD:1302963 NextBio:637799 Genevestigator:Q6MG13
Uniprot:Q6MG13
Length = 1044
Score = 523 (189.2 bits), Expect = 2.8e-49, P = 2.8e-49
Identities = 96/205 (46%), Positives = 141/205 (68%)
Query: 11 QMAEFPLEPNLSKMLIMSVHLQCSDEVLTIVSMLSVQN-VFYRPXXXXXXXXXXXXXFNQ 69
+MAE P++P LSKM++ S CS+E+LT+ +MLSV N +FYRP F
Sbjct: 817 KMAELPVDPMLSKMILASEKYSCSEEILTVAAMLSVNNSIFYRPKDKVVHADNARVNFFL 876
Query: 70 MEGDHITLLAVYNSWRNNKFSNAWCYENFVQIRTLKRAQDVRKQLLGIMDRHKLDVVSAG 129
GDH+ LL VY W + +S+ WCYENFVQ R+++RA+DVR+QL G+++R ++ + S
Sbjct: 877 PGGDHLVLLNVYTQWAESGYSSQWCYENFVQFRSMRRARDVREQLEGLLERVEVGLTSCQ 936
Query: 130 KNTVRVQKAVCSGFFRNAAKKDPQEGYRTLVDSQVVYIHPSSALFNRQPEWVIYHELVQT 189
+ VRV+KA+ SG+F + A+ + GYRT+ Q V+IHP+S+LF +QP W++YHELV T
Sbjct: 937 GDYVRVRKAITSGYFYHTARLT-RSGYRTVKQQQTVFIHPNSSLFEQQPRWLLYHELVLT 995
Query: 190 TKEYMREVTSIDPKWLVEFAPAFFK 214
TKE+MR+V I+ WL+E AP ++K
Sbjct: 996 TKEFMRQVLEIESSWLLEVAPHYYK 1020
Score = 299 (110.3 bits), Expect = 1.5e-47, Sum P(2) = 1.5e-47
Identities = 79/249 (31%), Positives = 131/249 (52%)
Query: 101 IRTLKRAQDV---RKQLLGIMDRHKLDVVS----AGKNTVRVQKAVCSGFFRNAAKKDPQ 153
I+ ++R+ V R++LL + H++ ++ +GK T Q G+ + K
Sbjct: 395 IQAVRRSLPVFPFREELLTAIANHQVLIIEGETGSGKTTQIPQYLFEEGYTKKGMKIACT 454
Query: 154 EGYRTLVDSQVVYIHPSSAL-FNRQPEWVIYHELVQTTKEYMREVTSIDPKWLVEFAPAF 212
+ R S + + + + I E + + +R +T D L EF
Sbjct: 455 QPRRVAAMSVAARVAREMGVKLGNEVGYSIRFEDCTSERTVLRYMT--DGMLLREF---- 508
Query: 213 FKFSDPTKLSKFKKNQRLEPLQRTNRISFPPGLLKQAVKKRPEIKLIVTSATLDAVKFSS 272
S+P L+ + E +RT GL+K + RPE+K++V SATLD +FS+
Sbjct: 509 --LSEPD-LASYSVVMVDEAHERTLHTDILFGLIKDVARFRPELKVLVASATLDTARFSA 565
Query: 273 YFFEAPIFTIPGRTFPVEVLYTKEPETDYLDASLITVMQIHLREPPGDVLLFLTGKLDVR 332
+F +AP+F IPGR FPV++ YTK PE DYL+A +++V+QIH+ +PPGD+L+FLTG+ ++
Sbjct: 566 FFDDAPVFRIPGRRFPVDIFYTKAPEADYLEACVVSVLQIHVTQPPGDILVFLTGQEEIE 625
Query: 333 KQLLGIMDR 341
+ DR
Sbjct: 626 AACEMLQDR 634
Score = 280 (103.6 bits), Expect = 1.5e-47, Sum P(2) = 1.5e-47
Identities = 51/106 (48%), Positives = 78/106 (73%)
Query: 330 DVRKQLLGIMDRHKLDVVSAGKNTVRVQKAVCSGFFRNAAKKDPQEGYRTLVDSQVVYIH 389
DVR+QL G+++R ++ + S + VRV+KA+ SG+F + A+ + GYRT+ Q V+IH
Sbjct: 916 DVREQLEGLLERVEVGLTSCQGDYVRVRKAITSGYFYHTARLT-RSGYRTVKQQQTVFIH 974
Query: 390 PSSALFNRQPEWVIYHELVQTTKEYMREVTSIDPKWLVEFAPAFFK 435
P+S+LF +QP W++YHELV TTKE+MR+V I+ WL+E AP ++K
Sbjct: 975 PNSSLFEQQPRWLLYHELVLTTKEFMRQVLEIESSWLLEVAPHYYK 1020
Score = 261 (96.9 bits), Expect = 1.4e-45, Sum P(2) = 1.4e-45
Identities = 47/75 (62%), Positives = 63/75 (84%)
Query: 468 REEIDTACEILYERMKSLGPDVPELIILPVYSALPSEMQTRIFEAAPPGSRKVVIATNIA 527
+EEI+ ACE+L +R + LG + EL++LP+Y+ LPS+MQ RIF+ PPG+RKVV+ATNIA
Sbjct: 621 QEEIEAACEMLQDRCRRLGSKIRELLVLPIYANLPSDMQARIFQPTPPGARKVVVATNIA 680
Query: 528 ETSLTIDGIFYVVDP 542
ETSLTI+GI YV+DP
Sbjct: 681 ETSLTIEGIIYVLDP 695
Score = 37 (18.1 bits), Expect = 4.3e-22, Sum P(2) = 4.3e-22
Identities = 7/17 (41%), Positives = 8/17 (47%)
Query: 395 FNRQPEWVIYHELVQTT 411
F W HEL +TT
Sbjct: 738 FRLYTAWAYQHELEETT 754
Score = 37 (18.1 bits), Expect = 6.3e-20, Sum P(2) = 6.3e-20
Identities = 7/17 (41%), Positives = 8/17 (47%)
Query: 174 FNRQPEWVIYHELVQTT 190
F W HEL +TT
Sbjct: 738 FRLYTAWAYQHELEETT 754
>UNIPROTKB|O60231 [details] [associations]
symbol:DHX16 "Putative pre-mRNA-splicing factor
ATP-dependent RNA helicase DHX16" species:9606 "Homo sapiens"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0006397 "mRNA processing" evidence=IEA]
[GO:0008380 "RNA splicing" evidence=IEA] [GO:0003724 "RNA helicase
activity" evidence=TAS] [GO:0005634 "nucleus" evidence=IDA]
[GO:0005730 "nucleolus" evidence=IDA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0005634 EMBL:BA000025 GO:GO:0008380 GO:GO:0006397
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
EMBL:AL845353 eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 HOGENOM:HOG000175261 KO:K12813 GO:GO:0003724
HOVERGEN:HBG039428 OMA:GTLHREF EMBL:AB001601 EMBL:AB011149
EMBL:BC008825 EMBL:BC009392 IPI:IPI00552073 RefSeq:NP_001157711.1
RefSeq:NP_003578.2 UniGene:Hs.485060 ProteinModelPortal:O60231
SMR:O60231 IntAct:O60231 MINT:MINT-5003862 STRING:O60231
PhosphoSite:O60231 PaxDb:O60231 PRIDE:O60231 DNASU:8449
Ensembl:ENST00000376442 Ensembl:ENST00000383577
Ensembl:ENST00000417308 Ensembl:ENST00000421095
Ensembl:ENST00000424672 Ensembl:ENST00000451456
Ensembl:ENST00000458094 GeneID:8449 KEGG:hsa:8449 UCSC:uc003nqz.3
CTD:8449 GeneCards:GC06M030620 HGNC:HGNC:2739 HPA:HPA051455
MIM:603405 neXtProt:NX_O60231 PharmGKB:PA27205 InParanoid:O60231
OrthoDB:EOG4VHK5Q PhylomeDB:O60231 GenomeRNAi:8449 NextBio:31614
ArrayExpress:O60231 Bgee:O60231 CleanEx:HS_DHX16
Genevestigator:O60231 GermOnline:ENSG00000204560 Uniprot:O60231
Length = 1041
Score = 517 (187.1 bits), Expect = 1.2e-48, P = 1.2e-48
Identities = 94/205 (45%), Positives = 141/205 (68%)
Query: 11 QMAEFPLEPNLSKMLIMSVHLQCSDEVLTIVSMLSVQN-VFYRPXXXXXXXXXXXXXFNQ 69
+MAE P++P LSKM++ S CS+E+LT+ +MLSV N +FYRP F
Sbjct: 814 KMAELPVDPMLSKMILASEKYSCSEEILTVAAMLSVNNSIFYRPKDKVVHADNARVNFFL 873
Query: 70 MEGDHITLLAVYNSWRNNKFSNAWCYENFVQIRTLKRAQDVRKQLLGIMDRHKLDVVSAG 129
GDH+ LL VY W + +S+ WCYENFVQ R+++RA+DVR+QL G+++R ++ + S
Sbjct: 874 PGGDHLVLLNVYTQWAESGYSSQWCYENFVQFRSMRRARDVREQLEGLLERVEVGLSSCQ 933
Query: 130 KNTVRVQKAVCSGFFRNAAKKDPQEGYRTLVDSQVVYIHPSSALFNRQPEWVIYHELVQT 189
+ +RV+KA+ +G+F + A+ + GYRT+ Q V+IHP+S+LF +QP W++YHELV T
Sbjct: 934 GDYIRVRKAITAGYFYHTARLT-RSGYRTVKQQQTVFIHPNSSLFEQQPRWLLYHELVLT 992
Query: 190 TKEYMREVTSIDPKWLVEFAPAFFK 214
TKE+MR+V I+ WL+E AP ++K
Sbjct: 993 TKEFMRQVLEIESSWLLEVAPHYYK 1017
Score = 297 (109.6 bits), Expect = 1.1e-46, Sum P(2) = 1.1e-46
Identities = 78/249 (31%), Positives = 130/249 (52%)
Query: 101 IRTLKRAQDV---RKQLLGIMDRHKLDVVS----AGKNTVRVQKAVCSGFFRNAAKKDPQ 153
I+ ++R+ V R++LL + H++ ++ +GK T Q G+ K
Sbjct: 392 IQAVRRSLPVFPFREELLAAIANHQVLIIEGETGSGKTTQIPQYLFEEGYTNKGMKIACT 451
Query: 154 EGYRTLVDSQVVYIHPSSAL-FNRQPEWVIYHELVQTTKEYMREVTSIDPKWLVEFAPAF 212
+ R S + + + + I E + + +R +T D L EF
Sbjct: 452 QPRRVAAMSVAARVAREMGVKLGNEVGYSIRFEDCTSERTVLRYMT--DGMLLREF---- 505
Query: 213 FKFSDPTKLSKFKKNQRLEPLQRTNRISFPPGLLKQAVKKRPEIKLIVTSATLDAVKFSS 272
S+P L+ + E +RT GL+K + RPE+K++V SAT+D +FS+
Sbjct: 506 --LSEPD-LASYSVVMVDEAHERTLHTDILFGLIKDVARFRPELKVLVASATMDTARFST 562
Query: 273 YFFEAPIFTIPGRTFPVEVLYTKEPETDYLDASLITVMQIHLREPPGDVLLFLTGKLDVR 332
+F +AP+F IPGR FPV++ YTK PE DYL+A +++V+QIH+ +PPGD+L+FLTG+ ++
Sbjct: 563 FFDDAPVFRIPGRRFPVDIFYTKAPEADYLEACVVSVLQIHVTQPPGDILVFLTGQEEIE 622
Query: 333 KQLLGIMDR 341
+ DR
Sbjct: 623 AACEMLQDR 631
Score = 274 (101.5 bits), Expect = 1.1e-46, Sum P(2) = 1.1e-46
Identities = 49/106 (46%), Positives = 78/106 (73%)
Query: 330 DVRKQLLGIMDRHKLDVVSAGKNTVRVQKAVCSGFFRNAAKKDPQEGYRTLVDSQVVYIH 389
DVR+QL G+++R ++ + S + +RV+KA+ +G+F + A+ + GYRT+ Q V+IH
Sbjct: 913 DVREQLEGLLERVEVGLSSCQGDYIRVRKAITAGYFYHTARLT-RSGYRTVKQQQTVFIH 971
Query: 390 PSSALFNRQPEWVIYHELVQTTKEYMREVTSIDPKWLVEFAPAFFK 435
P+S+LF +QP W++YHELV TTKE+MR+V I+ WL+E AP ++K
Sbjct: 972 PNSSLFEQQPRWLLYHELVLTTKEFMRQVLEIESSWLLEVAPHYYK 1017
Score = 261 (96.9 bits), Expect = 2.4e-45, Sum P(2) = 2.4e-45
Identities = 47/75 (62%), Positives = 63/75 (84%)
Query: 468 REEIDTACEILYERMKSLGPDVPELIILPVYSALPSEMQTRIFEAAPPGSRKVVIATNIA 527
+EEI+ ACE+L +R + LG + EL++LP+Y+ LPS+MQ RIF+ PPG+RKVV+ATNIA
Sbjct: 618 QEEIEAACEMLQDRCRRLGSKIRELLVLPIYANLPSDMQARIFQPTPPGARKVVVATNIA 677
Query: 528 ETSLTIDGIFYVVDP 542
ETSLTI+GI YV+DP
Sbjct: 678 ETSLTIEGIIYVLDP 692
Score = 37 (18.1 bits), Expect = 7.3e-22, Sum P(2) = 7.3e-22
Identities = 7/17 (41%), Positives = 8/17 (47%)
Query: 395 FNRQPEWVIYHELVQTT 411
F W HEL +TT
Sbjct: 735 FRLYTAWAYQHELEETT 751
Score = 37 (18.1 bits), Expect = 3.0e-19, Sum P(2) = 3.0e-19
Identities = 7/17 (41%), Positives = 8/17 (47%)
Query: 174 FNRQPEWVIYHELVQTT 190
F W HEL +TT
Sbjct: 735 FRLYTAWAYQHELEETT 751
>UNIPROTKB|F1PGL2 [details] [associations]
symbol:DHX16 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026 KO:K12813
GeneTree:ENSGT00700000104241 OMA:GTLHREF CTD:8449 EMBL:AAEX03008197
RefSeq:XP_538827.2 Ensembl:ENSCAFT00000000685 GeneID:481706
KEGG:cfa:481706 Uniprot:F1PGL2
Length = 1042
Score = 517 (187.1 bits), Expect = 1.2e-48, P = 1.2e-48
Identities = 98/220 (44%), Positives = 144/220 (65%)
Query: 11 QMAEFPLEPNLSKMLIMSVHLQCSDEVLTIVSMLSVQN-VFYRPXXXXXXXXXXXXXFNQ 69
+MAE P++P LSKM++ S CS+E+LT+ +MLSV N +FYRP F
Sbjct: 815 KMAELPVDPMLSKMILASEKYSCSEEILTVAAMLSVNNSIFYRPKDKVVHADNARVNFFL 874
Query: 70 MEGDHITLLAVYNSWRNNKFSNAWCYENFVQIRTLKRAQDVRKQLLGIMDRHKLDVVSAG 129
GDH+ LL VY W + +S+ WCYENFVQ R+++RA+DVR+QL G+++R ++ + S
Sbjct: 875 PGGDHLVLLNVYTQWAESGYSSQWCYENFVQFRSMRRARDVREQLEGLLERVEVGLSSCQ 934
Query: 130 KNTVRVQKAVCSGFFRNAAKKDPQEGYRTLVDSQVVYIHPSSALFNRQPEWVIYHELVQT 189
+ +RV+KA+ +G+F + A+ + GYRT+ Q V+IHP+S+LF QP W++YHELV T
Sbjct: 935 GDYIRVRKAITAGYFYHTARLT-RSGYRTVKQQQTVFIHPNSSLFEEQPRWLLYHELVLT 993
Query: 190 TKEYMREVTSIDPKWLVEFAPAFFK---FSDPTKLSKFKK 226
TKE+MR+V I+ WL+E AP ++K DP KK
Sbjct: 994 TKEFMRQVLEIESSWLLEVAPHYYKAKELEDPHSKKMPKK 1033
Score = 298 (110.0 bits), Expect = 8.1e-47, Sum P(2) = 8.1e-47
Identities = 78/249 (31%), Positives = 131/249 (52%)
Query: 101 IRTLKRAQDV---RKQLLGIMDRHKLDVVS----AGKNTVRVQKAVCSGFFRNAAKKDPQ 153
++ ++R+ V R++LL + H++ ++ +GK T Q G+ + K
Sbjct: 393 VQAVRRSLPVFPFREELLAAIADHQVLIIEGETGSGKTTQIPQYLFEEGYTKKGMKIACT 452
Query: 154 EGYRTLVDSQVVYIHPSSAL-FNRQPEWVIYHELVQTTKEYMREVTSIDPKWLVEFAPAF 212
+ R S + + + + I E + + +R +T D L EF
Sbjct: 453 QPRRVAAMSVAARVAREMGVKLGNEVGYSIRFEDCTSERTVLRYMT--DGMLLREF---- 506
Query: 213 FKFSDPTKLSKFKKNQRLEPLQRTNRISFPPGLLKQAVKKRPEIKLIVTSATLDAVKFSS 272
S+P L+ + E +RT GL+K + RPE+K++V SATLD +FS+
Sbjct: 507 --LSEPD-LASYSVVMVDEAHERTLHTDILFGLIKDVARFRPELKVLVASATLDTARFST 563
Query: 273 YFFEAPIFTIPGRTFPVEVLYTKEPETDYLDASLITVMQIHLREPPGDVLLFLTGKLDVR 332
+F +AP+F IPGR FPV++ YTK PE DYL+A +++V+QIH+ +PPGD+L+FLTG+ ++
Sbjct: 564 FFDDAPVFRIPGRRFPVDIFYTKAPEADYLEACVVSVLQIHVTQPPGDILVFLTGQEEIE 623
Query: 333 KQLLGIMDR 341
+ DR
Sbjct: 624 AACEMLQDR 632
Score = 274 (101.5 bits), Expect = 8.1e-47, Sum P(2) = 8.1e-47
Identities = 53/121 (43%), Positives = 81/121 (66%)
Query: 330 DVRKQLLGIMDRHKLDVVSAGKNTVRVQKAVCSGFFRNAAKKDPQEGYRTLVDSQVVYIH 389
DVR+QL G+++R ++ + S + +RV+KA+ +G+F + A+ + GYRT+ Q V+IH
Sbjct: 914 DVREQLEGLLERVEVGLSSCQGDYIRVRKAITAGYFYHTARLT-RSGYRTVKQQQTVFIH 972
Query: 390 PSSALFNRQPEWVIYHELVQTTKEYMREVTSIDPKWLVEFAPAFFK---FSDPTKLSKFK 446
P+S+LF QP W++YHELV TTKE+MR+V I+ WL+E AP ++K DP K
Sbjct: 973 PNSSLFEEQPRWLLYHELVLTTKEFMRQVLEIESSWLLEVAPHYYKAKELEDPHSKKMPK 1032
Query: 447 K 447
K
Sbjct: 1033 K 1033
Score = 261 (96.9 bits), Expect = 1.9e-45, Sum P(2) = 1.9e-45
Identities = 47/75 (62%), Positives = 63/75 (84%)
Query: 468 REEIDTACEILYERMKSLGPDVPELIILPVYSALPSEMQTRIFEAAPPGSRKVVIATNIA 527
+EEI+ ACE+L +R + LG + EL++LP+Y+ LPS+MQ RIF+ PPG+RKVV+ATNIA
Sbjct: 619 QEEIEAACEMLQDRCRRLGSKIRELLVLPIYANLPSDMQARIFQPTPPGARKVVVATNIA 678
Query: 528 ETSLTIDGIFYVVDP 542
ETSLTI+GI YV+DP
Sbjct: 679 ETSLTIEGIIYVLDP 693
Score = 37 (18.1 bits), Expect = 5.7e-22, Sum P(2) = 5.7e-22
Identities = 7/17 (41%), Positives = 8/17 (47%)
Query: 395 FNRQPEWVIYHELVQTT 411
F W HEL +TT
Sbjct: 736 FRLYTAWAYQHELEETT 752
Score = 37 (18.1 bits), Expect = 3.0e-19, Sum P(2) = 3.0e-19
Identities = 7/17 (41%), Positives = 8/17 (47%)
Query: 174 FNRQPEWVIYHELVQTT 190
F W HEL +TT
Sbjct: 736 FRLYTAWAYQHELEETT 752
>UNIPROTKB|E1BF68 [details] [associations]
symbol:DHX16 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005634 "nucleus" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 KO:K12813 GeneTree:ENSGT00700000104241 OMA:GTLHREF
CTD:8449 EMBL:DAAA02055402 IPI:IPI00691986 RefSeq:NP_001193139.1
UniGene:Bt.22201 PRIDE:E1BF68 Ensembl:ENSBTAT00000009148
GeneID:506405 KEGG:bta:506405 NextBio:20867594 Uniprot:E1BF68
Length = 1045
Score = 516 (186.7 bits), Expect = 1.6e-48, P = 1.6e-48
Identities = 94/205 (45%), Positives = 140/205 (68%)
Query: 11 QMAEFPLEPNLSKMLIMSVHLQCSDEVLTIVSMLSVQN-VFYRPXXXXXXXXXXXXXFNQ 69
+MAE P++P LSKM++ S CS+E+LT+ +MLSV N +FYRP F
Sbjct: 818 KMAELPVDPMLSKMILASEKYSCSEEILTVAAMLSVNNSIFYRPKDKVVHADNARVNFFL 877
Query: 70 MEGDHITLLAVYNSWRNNKFSNAWCYENFVQIRTLKRAQDVRKQLLGIMDRHKLDVVSAG 129
GDH+ LL VY W + +S+ WCYENFVQ R+++RA+DVR+QL G+++R ++ + S
Sbjct: 878 PGGDHLVLLNVYTQWAESGYSSQWCYENFVQFRSMRRARDVREQLEGLLERVEVGLSSCQ 937
Query: 130 KNTVRVQKAVCSGFFRNAAKKDPQEGYRTLVDSQVVYIHPSSALFNRQPEWVIYHELVQT 189
+ +RV+KA+ +G+F + A+ + GYRT+ Q V+IHP+S+LF QP W++YHELV T
Sbjct: 938 GDYIRVRKAITAGYFYHTARLT-RSGYRTVKQQQTVFIHPNSSLFEEQPRWLLYHELVLT 996
Query: 190 TKEYMREVTSIDPKWLVEFAPAFFK 214
TKE+MR+V I+ WL+E AP ++K
Sbjct: 997 TKEFMRQVLEIESSWLLEVAPHYYK 1021
Score = 302 (111.4 bits), Expect = 3.6e-47, Sum P(2) = 3.6e-47
Identities = 80/249 (32%), Positives = 131/249 (52%)
Query: 101 IRTLKRAQDV---RKQLLGIMDRHKLDVVS----AGKNTVRVQKAVCSGFFRNAAKKDPQ 153
I+ ++R+ V R++LL + H++ ++ +GK T Q G+ + K
Sbjct: 396 IQAVRRSLPVFPFREELLAAIANHQVLIIEGETGSGKTTQIPQYLFEEGYTKKGMKIACT 455
Query: 154 EGYRTLVDSQVVYIHPSSAL-FNRQPEWVIYHELVQTTKEYMREVTSIDPKWLVEFAPAF 212
+ R S + + + + I E + + +R +T D L EF
Sbjct: 456 QPRRVAAMSVAARVAREMGVKLGNEVGYSIRFEDCTSERTVLRYMT--DGMLLREF---- 509
Query: 213 FKFSDPTKLSKFKKNQRLEPLQRTNRISFPPGLLKQAVKKRPEIKLIVTSATLDAVKFSS 272
S+P L+ + E +RT GL+K + RPE+K++V SATLD +FS+
Sbjct: 510 --LSEPD-LASYSVVMVDEAHERTLHTDILFGLIKDVARFRPELKVLVASATLDTARFST 566
Query: 273 YFFEAPIFTIPGRTFPVEVLYTKEPETDYLDASLITVMQIHLREPPGDVLLFLTGKLDVR 332
+F +APIF IPGR FPV++ YTK PE DYL+A +++V+QIH+ +PPGD+L+FLTG+ ++
Sbjct: 567 FFDDAPIFRIPGRRFPVDIFYTKAPEADYLEACVVSVLQIHVTQPPGDILVFLTGQEEIE 626
Query: 333 KQLLGIMDR 341
+ DR
Sbjct: 627 AACEMLQDR 635
Score = 273 (101.2 bits), Expect = 3.6e-47, Sum P(2) = 3.6e-47
Identities = 49/106 (46%), Positives = 77/106 (72%)
Query: 330 DVRKQLLGIMDRHKLDVVSAGKNTVRVQKAVCSGFFRNAAKKDPQEGYRTLVDSQVVYIH 389
DVR+QL G+++R ++ + S + +RV+KA+ +G+F + A+ + GYRT+ Q V+IH
Sbjct: 917 DVREQLEGLLERVEVGLSSCQGDYIRVRKAITAGYFYHTARLT-RSGYRTVKQQQTVFIH 975
Query: 390 PSSALFNRQPEWVIYHELVQTTKEYMREVTSIDPKWLVEFAPAFFK 435
P+S+LF QP W++YHELV TTKE+MR+V I+ WL+E AP ++K
Sbjct: 976 PNSSLFEEQPRWLLYHELVLTTKEFMRQVLEIESSWLLEVAPHYYK 1021
Score = 261 (96.9 bits), Expect = 6.5e-46, Sum P(2) = 6.5e-46
Identities = 47/75 (62%), Positives = 63/75 (84%)
Query: 468 REEIDTACEILYERMKSLGPDVPELIILPVYSALPSEMQTRIFEAAPPGSRKVVIATNIA 527
+EEI+ ACE+L +R + LG + EL++LP+Y+ LPS+MQ RIF+ PPG+RKVV+ATNIA
Sbjct: 622 QEEIEAACEMLQDRCRRLGSKIRELLVLPIYANLPSDMQARIFQPTPPGARKVVVATNIA 681
Query: 528 ETSLTIDGIFYVVDP 542
ETSLTI+GI YV+DP
Sbjct: 682 ETSLTIEGIIYVLDP 696
Score = 37 (18.1 bits), Expect = 2.0e-22, Sum P(2) = 2.0e-22
Identities = 7/17 (41%), Positives = 8/17 (47%)
Query: 395 FNRQPEWVIYHELVQTT 411
F W HEL +TT
Sbjct: 739 FRLYTAWAYQHELEETT 755
Score = 37 (18.1 bits), Expect = 3.9e-19, Sum P(2) = 3.9e-19
Identities = 7/17 (41%), Positives = 8/17 (47%)
Query: 174 FNRQPEWVIYHELVQTT 190
F W HEL +TT
Sbjct: 739 FRLYTAWAYQHELEETT 755
>UNIPROTKB|F1RU83 [details] [associations]
symbol:DHX16 "Putative pre-mRNA-splicing factor
ATP-dependent RNA helicase DHX16" species:9823 "Sus scrofa"
[GO:0005634 "nucleus" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408
PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
GeneTree:ENSGT00700000104241 OMA:GTLHREF EMBL:CU480634
Ensembl:ENSSSCT00000001498 Uniprot:F1RU83
Length = 1045
Score = 516 (186.7 bits), Expect = 1.6e-48, P = 1.6e-48
Identities = 94/205 (45%), Positives = 140/205 (68%)
Query: 11 QMAEFPLEPNLSKMLIMSVHLQCSDEVLTIVSMLSVQN-VFYRPXXXXXXXXXXXXXFNQ 69
+MAE P++P LSKM++ S CS+E+LT+ +MLSV N +FYRP F
Sbjct: 818 KMAELPVDPMLSKMILASEKYSCSEEILTVAAMLSVNNSIFYRPKDKVVHADNARVNFFL 877
Query: 70 MEGDHITLLAVYNSWRNNKFSNAWCYENFVQIRTLKRAQDVRKQLLGIMDRHKLDVVSAG 129
GDH+ LL VY W + +S+ WCYENFVQ R+++RA+DVR+QL G+++R ++ + S
Sbjct: 878 PGGDHLVLLNVYTQWAESGYSSQWCYENFVQFRSMRRARDVREQLEGLLERVEVGLSSCQ 937
Query: 130 KNTVRVQKAVCSGFFRNAAKKDPQEGYRTLVDSQVVYIHPSSALFNRQPEWVIYHELVQT 189
+ +RV+KA+ +G+F + A+ + GYRT+ Q V+IHP+S+LF QP W++YHELV T
Sbjct: 938 GDYIRVRKAITAGYFYHTARLT-RSGYRTVKQQQTVFIHPNSSLFEEQPRWLLYHELVLT 996
Query: 190 TKEYMREVTSIDPKWLVEFAPAFFK 214
TKE+MR+V I+ WL+E AP ++K
Sbjct: 997 TKEFMRQVLEIESSWLLEVAPHYYK 1021
Score = 301 (111.0 bits), Expect = 4.6e-47, Sum P(2) = 4.6e-47
Identities = 79/249 (31%), Positives = 131/249 (52%)
Query: 101 IRTLKRAQDV---RKQLLGIMDRHKLDVVS----AGKNTVRVQKAVCSGFFRNAAKKDPQ 153
I+ ++R+ V R++LL + H++ ++ +GK T Q G+ + K
Sbjct: 396 IQAVRRSLPVFPFREELLAAVANHQILIIEGETGSGKTTQIPQYLFEEGYTQKGMKIACT 455
Query: 154 EGYRTLVDSQVVYIHPSSAL-FNRQPEWVIYHELVQTTKEYMREVTSIDPKWLVEFAPAF 212
+ R S + + + + I E + + +R +T D L EF
Sbjct: 456 QPRRVAAMSVAARVAREMGVKLGNEVGYSIRFEDCTSERTVLRYMT--DGMLLREF---- 509
Query: 213 FKFSDPTKLSKFKKNQRLEPLQRTNRISFPPGLLKQAVKKRPEIKLIVTSATLDAVKFSS 272
S+P L+ + E +RT GL+K + RPE+K++V SATLD +FS+
Sbjct: 510 --LSEPD-LASYSVVMVDEAHERTLHTDILFGLIKDVARFRPELKVLVASATLDTARFST 566
Query: 273 YFFEAPIFTIPGRTFPVEVLYTKEPETDYLDASLITVMQIHLREPPGDVLLFLTGKLDVR 332
+F +AP+F IPGR FPV++ YTK PE DYL+A +++V+QIH+ +PPGD+L+FLTG+ ++
Sbjct: 567 FFDDAPVFRIPGRRFPVDIFYTKAPEADYLEACVVSVLQIHVTQPPGDILVFLTGQEEIE 626
Query: 333 KQLLGIMDR 341
+ DR
Sbjct: 627 AACEMLQDR 635
Score = 273 (101.2 bits), Expect = 4.6e-47, Sum P(2) = 4.6e-47
Identities = 49/106 (46%), Positives = 77/106 (72%)
Query: 330 DVRKQLLGIMDRHKLDVVSAGKNTVRVQKAVCSGFFRNAAKKDPQEGYRTLVDSQVVYIH 389
DVR+QL G+++R ++ + S + +RV+KA+ +G+F + A+ + GYRT+ Q V+IH
Sbjct: 917 DVREQLEGLLERVEVGLSSCQGDYIRVRKAITAGYFYHTARLT-RSGYRTVKQQQTVFIH 975
Query: 390 PSSALFNRQPEWVIYHELVQTTKEYMREVTSIDPKWLVEFAPAFFK 435
P+S+LF QP W++YHELV TTKE+MR+V I+ WL+E AP ++K
Sbjct: 976 PNSSLFEEQPRWLLYHELVLTTKEFMRQVLEIESSWLLEVAPHYYK 1021
Score = 261 (96.9 bits), Expect = 8.5e-46, Sum P(2) = 8.5e-46
Identities = 47/75 (62%), Positives = 63/75 (84%)
Query: 468 REEIDTACEILYERMKSLGPDVPELIILPVYSALPSEMQTRIFEAAPPGSRKVVIATNIA 527
+EEI+ ACE+L +R + LG + EL++LP+Y+ LPS+MQ RIF+ PPG+RKVV+ATNIA
Sbjct: 622 QEEIEAACEMLQDRCRRLGSKIRELLVLPIYANLPSDMQARIFQPTPPGARKVVVATNIA 681
Query: 528 ETSLTIDGIFYVVDP 542
ETSLTI+GI YV+DP
Sbjct: 682 ETSLTIEGIIYVLDP 696
Score = 37 (18.1 bits), Expect = 2.6e-22, Sum P(2) = 2.6e-22
Identities = 7/17 (41%), Positives = 8/17 (47%)
Query: 395 FNRQPEWVIYHELVQTT 411
F W HEL +TT
Sbjct: 739 FRLYTAWAYQHELEETT 755
Score = 37 (18.1 bits), Expect = 3.9e-19, Sum P(2) = 3.9e-19
Identities = 7/17 (41%), Positives = 8/17 (47%)
Query: 174 FNRQPEWVIYHELVQTT 190
F W HEL +TT
Sbjct: 739 FRLYTAWAYQHELEETT 755
>UNIPROTKB|Q767K6 [details] [associations]
symbol:DHX16 "Putative pre-mRNA-splicing factor
ATP-dependent RNA helicase DHX16" species:9823 "Sus scrofa"
[GO:0005634 "nucleus" evidence=IEA] [GO:0008380 "RNA splicing"
evidence=IEA] [GO:0006397 "mRNA processing" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 GO:GO:0005524 GO:GO:0005634 GO:GO:0008380
GO:GO:0006397 GO:GO:0003676 EMBL:AB113357 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 EMBL:AB113356 eggNOG:COG1643
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026 HOGENOM:HOG000175261
KO:K12813 HOVERGEN:HBG039428 CTD:8449 OrthoDB:EOG4VHK5Q
RefSeq:NP_001116578.1 UniGene:Ssc.15273 ProteinModelPortal:Q767K6
GeneID:100144456 KEGG:ssc:100144456 Uniprot:Q767K6
Length = 1045
Score = 516 (186.7 bits), Expect = 1.6e-48, P = 1.6e-48
Identities = 94/205 (45%), Positives = 140/205 (68%)
Query: 11 QMAEFPLEPNLSKMLIMSVHLQCSDEVLTIVSMLSVQN-VFYRPXXXXXXXXXXXXXFNQ 69
+MAE P++P LSKM++ S CS+E+LT+ +MLSV N +FYRP F
Sbjct: 818 KMAELPVDPMLSKMILASEKYSCSEEILTVAAMLSVNNSIFYRPKDKVVHADNARVNFFL 877
Query: 70 MEGDHITLLAVYNSWRNNKFSNAWCYENFVQIRTLKRAQDVRKQLLGIMDRHKLDVVSAG 129
GDH+ LL VY W + +S+ WCYENFVQ R+++RA+DVR+QL G+++R ++ + S
Sbjct: 878 PGGDHLVLLNVYTQWAESGYSSQWCYENFVQFRSMRRARDVREQLEGLLERVEVGLSSCQ 937
Query: 130 KNTVRVQKAVCSGFFRNAAKKDPQEGYRTLVDSQVVYIHPSSALFNRQPEWVIYHELVQT 189
+ +RV+KA+ +G+F + A+ + GYRT+ Q V+IHP+S+LF QP W++YHELV T
Sbjct: 938 GDYIRVRKAITAGYFYHTARLT-RSGYRTVKQQQTVFIHPNSSLFEEQPRWLLYHELVLT 996
Query: 190 TKEYMREVTSIDPKWLVEFAPAFFK 214
TKE+MR+V I+ WL+E AP ++K
Sbjct: 997 TKEFMRQVLEIESSWLLEVAPHYYK 1021
Score = 301 (111.0 bits), Expect = 4.6e-47, Sum P(2) = 4.6e-47
Identities = 79/249 (31%), Positives = 131/249 (52%)
Query: 101 IRTLKRAQDV---RKQLLGIMDRHKLDVVS----AGKNTVRVQKAVCSGFFRNAAKKDPQ 153
I+ ++R+ V R++LL + H++ ++ +GK T Q G+ + K
Sbjct: 396 IQAVRRSLPVFPFREELLAAVANHQILIIEGETGSGKTTQIPQYLFEEGYTQKGMKIACT 455
Query: 154 EGYRTLVDSQVVYIHPSSAL-FNRQPEWVIYHELVQTTKEYMREVTSIDPKWLVEFAPAF 212
+ R S + + + + I E + + +R +T D L EF
Sbjct: 456 QPRRVAAMSVAARVAREMGVKLGNEVGYSIRFEDCTSERTVLRYMT--DGMLLREF---- 509
Query: 213 FKFSDPTKLSKFKKNQRLEPLQRTNRISFPPGLLKQAVKKRPEIKLIVTSATLDAVKFSS 272
S+P L+ + E +RT GL+K + RPE+K++V SATLD +FS+
Sbjct: 510 --LSEPD-LASYSVVMVDEAHERTLHTDILFGLIKDVARFRPELKVLVASATLDTARFST 566
Query: 273 YFFEAPIFTIPGRTFPVEVLYTKEPETDYLDASLITVMQIHLREPPGDVLLFLTGKLDVR 332
+F +AP+F IPGR FPV++ YTK PE DYL+A +++V+QIH+ +PPGD+L+FLTG+ ++
Sbjct: 567 FFDDAPVFRIPGRRFPVDIFYTKAPEADYLEACVVSVLQIHVTQPPGDILVFLTGQEEIE 626
Query: 333 KQLLGIMDR 341
+ DR
Sbjct: 627 AACEMLQDR 635
Score = 273 (101.2 bits), Expect = 4.6e-47, Sum P(2) = 4.6e-47
Identities = 49/106 (46%), Positives = 77/106 (72%)
Query: 330 DVRKQLLGIMDRHKLDVVSAGKNTVRVQKAVCSGFFRNAAKKDPQEGYRTLVDSQVVYIH 389
DVR+QL G+++R ++ + S + +RV+KA+ +G+F + A+ + GYRT+ Q V+IH
Sbjct: 917 DVREQLEGLLERVEVGLSSCQGDYIRVRKAITAGYFYHTARLT-RSGYRTVKQQQTVFIH 975
Query: 390 PSSALFNRQPEWVIYHELVQTTKEYMREVTSIDPKWLVEFAPAFFK 435
P+S+LF QP W++YHELV TTKE+MR+V I+ WL+E AP ++K
Sbjct: 976 PNSSLFEEQPRWLLYHELVLTTKEFMRQVLEIESSWLLEVAPHYYK 1021
Score = 261 (96.9 bits), Expect = 8.5e-46, Sum P(2) = 8.5e-46
Identities = 47/75 (62%), Positives = 63/75 (84%)
Query: 468 REEIDTACEILYERMKSLGPDVPELIILPVYSALPSEMQTRIFEAAPPGSRKVVIATNIA 527
+EEI+ ACE+L +R + LG + EL++LP+Y+ LPS+MQ RIF+ PPG+RKVV+ATNIA
Sbjct: 622 QEEIEAACEMLQDRCRRLGSKIRELLVLPIYANLPSDMQARIFQPTPPGARKVVVATNIA 681
Query: 528 ETSLTIDGIFYVVDP 542
ETSLTI+GI YV+DP
Sbjct: 682 ETSLTIEGIIYVLDP 696
Score = 37 (18.1 bits), Expect = 2.6e-22, Sum P(2) = 2.6e-22
Identities = 7/17 (41%), Positives = 8/17 (47%)
Query: 395 FNRQPEWVIYHELVQTT 411
F W HEL +TT
Sbjct: 739 FRLYTAWAYQHELEETT 755
Score = 37 (18.1 bits), Expect = 3.9e-19, Sum P(2) = 3.9e-19
Identities = 7/17 (41%), Positives = 8/17 (47%)
Query: 174 FNRQPEWVIYHELVQTT 190
F W HEL +TT
Sbjct: 739 FRLYTAWAYQHELEETT 755
>SGD|S000000815 [details] [associations]
symbol:PRP22 "DEAH-box RNA-dependent ATPase/ATP-dependent RNA
helicase" species:4932 "Saccharomyces cerevisiae" [GO:0071007
"U2-type catalytic step 2 spliceosome" evidence=IMP] [GO:0004386
"helicase activity" evidence=IEA] [GO:0003723 "RNA binding"
evidence=IEA] [GO:0006397 "mRNA processing" evidence=IEA]
[GO:0008380 "RNA splicing" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0000350 "generation of catalytic spliceosome for second
transesterification step" evidence=IDA;IMP] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0000386 "second spliceosomal transesterification
activity" evidence=IMP;IDA] [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0000390 "spliceosomal complex disassembly"
evidence=IMP] [GO:0004004 "ATP-dependent RNA helicase activity"
evidence=IDA] [GO:0071021 "U2-type post-spliceosomal complex"
evidence=IMP] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR003029 InterPro:IPR007502 Pfam:PF00271 Pfam:PF00575
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS50126 PROSITE:PS51194
SMART:SM00490 SMART:SM00847 SGD:S000000815 GO:GO:0005524 KO:K01897
GO:GO:0003723 EMBL:BK006939 EMBL:U18778 Gene3D:2.40.50.140
InterPro:IPR012340 SUPFAM:SSF50249 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
GO:GO:0004004 HOGENOM:HOG000175261 GO:GO:0071007 InterPro:IPR022967
SMART:SM00316 GO:GO:0000390 GeneTree:ENSGT00700000104241 KO:K12818
GO:GO:0000350 RefSeq:NP_010931.3 GeneID:856734 KEGG:sce:YER015W
OrthoDB:EOG45TGW9 EMBL:X58681 PIR:S13643 RefSeq:NP_010929.3
ProteinModelPortal:P24384 SMR:P24384 DIP:DIP-655N IntAct:P24384
MINT:MINT-648209 STRING:P24384 PaxDb:P24384 EnsemblFungi:YER013W
GeneID:856732 KEGG:sce:YER013W CYGD:YER013w OMA:QITQYLD
NextBio:982846 Genevestigator:P24384 GermOnline:YER013W
GO:GO:0071021 Uniprot:P24384
Length = 1145
Score = 514 (186.0 bits), Expect = 3.4e-48, P = 3.4e-48
Identities = 100/223 (44%), Positives = 145/223 (65%)
Query: 11 QMAEFPLEPNLSKMLIMSVHLQCSDEVLTIVSMLSVQNVFYRPXXXXXXXXXXXXXFNQM 70
+M+ FP++P LS+ L+ SV QCSDE++TI+SMLSVQNVFYRP F+
Sbjct: 897 EMSLFPMDPTLSRSLLSSVDNQCSDEIVTIISMLSVQNVFYRPKDRQLEADSKKAKFHHP 956
Query: 71 EGDHITLLAVYNSWRNNKFSNAWCYENFVQIRTLKRAQDVRKQLLGIMDRHKLDVVSAGK 130
GDH+TLL VY W+ +S +C NF+ R LKRA+DV+ Q+ I + L ++S
Sbjct: 957 YGDHLTLLNVYTRWQQANYSEQYCKTNFLHFRHLKRARDVKSQISMIFKKIGLKLISCHS 1016
Query: 131 NTVRVQKAVCSGFFRNAAKKDPQEGYRTLVDSQVVYIHPSSALFNRQPEWVIYHELVQTT 190
+ ++K SGFF NAAK+D Q GY+T+ V IHPSS+L+ ++ E+V+YH +V T+
Sbjct: 1017 DPDLIRKTFVSGFFMNAAKRDSQVGYKTINGGTEVGIHPSSSLYGKEYEYVMYHSIVLTS 1076
Query: 191 KEYMREVTSIDPKWLVEFAPAFFKFSDPTKLSKFKKNQRLEPL 233
+EYM +VTSI+P+WL+E AP F+K D S+ +K ++ PL
Sbjct: 1077 REYMSQVTSIEPQWLLEVAPHFYKAGDAE--SQSRKKAKIIPL 1117
Score = 304 (112.1 bits), Expect = 1.9e-48, Sum P(3) = 1.9e-48
Identities = 59/139 (42%), Positives = 94/139 (67%)
Query: 330 DVRKQLLGIMDRHKLDVVSAGKNTVRVQKAVCSGFFRNAAKKDPQEGYRTLVDSQVVYIH 389
DV+ Q+ I + L ++S + ++K SGFF NAAK+D Q GY+T+ V IH
Sbjct: 995 DVKSQISMIFKKIGLKLISCHSDPDLIRKTFVSGFFMNAAKRDSQVGYKTINGGTEVGIH 1054
Query: 390 PSSALFNRQPEWVIYHELVQTTKEYMREVTSIDPKWLVEFAPAFFKFSDPTKLSKFKKNQ 449
PSS+L+ ++ E+V+YH +V T++EYM +VTSI+P+WL+E AP F+K D S+ +K
Sbjct: 1055 PSSSLYGKEYEYVMYHSIVLTSREYMSQVTSIEPQWLLEVAPHFYKAGDAE--SQSRKKA 1112
Query: 450 RLEPLYNKY-EEPNAWRIS 467
++ PL+NK+ ++ N+WR+S
Sbjct: 1113 KIIPLHNKFAKDQNSWRLS 1131
Score = 292 (107.8 bits), Expect = 5.1e-47, Sum P(3) = 5.1e-47
Identities = 55/75 (73%), Positives = 67/75 (89%)
Query: 468 REEIDTACEILYERMKSLGPDVPELIILPVYSALPSEMQTRIFEAAPPGSRKVVIATNIA 527
+EEID+ CEILY+R+K+LG + EL+ILPVYSALPSE+Q++IFE P GSRKVV ATNIA
Sbjct: 701 QEEIDSCCEILYDRVKTLGDSIGELLILPVYSALPSEIQSKIFEPTPKGSRKVVFATNIA 760
Query: 528 ETSLTIDGIFYVVDP 542
ETS+TIDGI+YVVDP
Sbjct: 761 ETSITIDGIYYVVDP 775
Score = 290 (107.1 bits), Expect = 1.9e-48, Sum P(3) = 1.9e-48
Identities = 61/127 (48%), Positives = 85/127 (66%)
Query: 217 DPTKLSKFKKNQRLEPLQRTNRISFPPGLLKQAVKKRPEIKLIVTSATLDAVKFSSYFFE 276
DP ++SK+ E +RT LLK+A KRPE+K+IVTSATL++ KFS YF
Sbjct: 591 DP-EMSKYSVIMLDEAHERTVATDVLFALLKKAAIKRPELKVIVTSATLNSAKFSEYFLN 649
Query: 277 APIFTIPGRTFPVEVLYTKEPETDYLDASLITVMQIHLREPPGDVLLFLTGKLDVRKQLL 336
PI IPG+TFPVEVLY++ P+ DY++A+L V+ IH+ E PGD+L+FLTG+ ++
Sbjct: 650 CPIINIPGKTFPVEVLYSQTPQMDYIEAALDCVIDIHINEGPGDILVFLTGQEEIDSCCE 709
Query: 337 GIMDRHK 343
+ DR K
Sbjct: 710 ILYDRVK 716
Score = 38 (18.4 bits), Expect = 1.9e-48, Sum P(3) = 1.9e-48
Identities = 7/14 (50%), Positives = 9/14 (64%)
Query: 215 FSDPTKLSKFKKNQ 228
F DPTK K +N+
Sbjct: 431 FDDPTKNKKDSRNE 444
>WB|WBGene00003392 [details] [associations]
symbol:mog-4 species:6239 "Caenorhabditis elegans"
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005622 "intracellular"
evidence=IEA] [GO:0006810 "transport" evidence=IEA] [GO:0003676
"nucleic acid binding" evidence=IEA] [GO:0004386 "helicase
activity" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0009792 "embryo development ending in
birth or egg hatching" evidence=IMP] [GO:0040007 "growth"
evidence=IMP] [GO:0002119 "nematode larval development"
evidence=IMP] [GO:0000003 "reproduction" evidence=IMP] [GO:0040035
"hermaphrodite genitalia development" evidence=IMP] [GO:0018996
"molting cycle, collagen and cuticulin-based cuticle" evidence=IMP]
[GO:0042127 "regulation of cell proliferation" evidence=IMP]
[GO:0040020 "regulation of meiosis" evidence=IMP] [GO:0040022
"feminization of hermaphroditic germ-line" evidence=IMP]
[GO:0007281 "germ cell development" evidence=IMP] [GO:0048589
"developmental growth" evidence=IMP] [GO:0010172 "embryonic body
morphogenesis" evidence=IMP] [GO:0005515 "protein binding"
evidence=IPI] InterPro:IPR001482 InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 Pfam:PF00271 Pfam:PF00437
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 GO:GO:0005524 GO:GO:0005634 GO:GO:0009792
GO:GO:0002119 GO:GO:0008380 GO:GO:0006810 GO:GO:0018996
GO:GO:0006397 GO:GO:0003676 GO:GO:0042127 GO:GO:0040035
GO:GO:0007281 GO:GO:0048589 GO:GO:0010172 GO:GO:0040020
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643
InterPro:IPR011709 Pfam:PF07717 GO:GO:0040022 GO:GO:0008026
HOGENOM:HOG000175261 KO:K12813 EMBL:AF286900 EMBL:Z81462
EMBL:Z81457 PIR:T18832 RefSeq:NP_497027.1 UniGene:Cel.17139
ProteinModelPortal:O45244 SMR:O45244 DIP:DIP-24771N IntAct:O45244
MINT:MINT-1105817 STRING:O45244 PaxDb:O45244 EnsemblMetazoa:C04H5.6
GeneID:175117 KEGG:cel:CELE_C04H5.6 UCSC:C04H5.6 CTD:175117
WormBase:C04H5.6 GeneTree:ENSGT00700000104241 InParanoid:O45244
OMA:GTLHREF NextBio:886834 ArrayExpress:O45244 Uniprot:O45244
Length = 1008
Score = 497 (180.0 bits), Expect = 1.6e-46, P = 1.6e-46
Identities = 96/222 (43%), Positives = 142/222 (63%)
Query: 11 QMAEFPLEPNLSKMLIMSVHLQCSDEVLTIVSMLSVQN-VFYRPXXXXXXXXXXXXXFNQ 69
+MAEFP +P +SKM+I S +CS+E++TI +MLS VFYRP F
Sbjct: 780 RMAEFPCDPCMSKMIIASEKYECSEEIVTIAAMLSCNAAVFYRPKAQVIHADSARKGFWS 839
Query: 70 MEGDHITLLAVYNSWRNNKFSNAWCYENFVQIRTLKRAQDVRKQLLGIMDRHKLDVVSAG 129
GDHITL+ VYN W+ + FS WC EN+VQ RT+KRA+DVR QL+G+++R +++ S+
Sbjct: 840 PAGDHITLMNVYNKWQESSFSQRWCVENYVQHRTMKRARDVRDQLVGLLERVEIETKSS- 898
Query: 130 KNTVRVQKAVCSGFFRNAAKKDPQEGYRTLVDSQVVYIHPSSALFNRQPEWVIYHELVQT 189
+T++++KA+ +G+F N +K D Y+T+ + HP+S LF P WV+Y ELV T
Sbjct: 899 TDTIKIRKAITAGYFYNVSKLDNTGHYKTVKHKHTTHPHPNSCLFEETPRWVVYFELVFT 958
Query: 190 TKEYMREVTSIDPKWLVEFAPAFFK---FSDPTKLSKFKKNQ 228
+KE+MRE++ I+ WL+E AP ++K D T K KN+
Sbjct: 959 SKEFMREMSEIESGWLLEVAPHYYKGRELEDATN-KKMPKNK 999
Score = 301 (111.0 bits), Expect = 1.4e-44, Sum P(2) = 1.4e-44
Identities = 57/114 (50%), Positives = 83/114 (72%)
Query: 231 EPLQRTNRISFPPGLLKQAVKKRPEIKLIVTSATLDAVKFSSYFFEAPIFTIPGRTFPVE 290
E +RT GL+K + R ++KL+++SATLDA KFSS+F +APIF IPGR FPV+
Sbjct: 486 EAHERTLHTDILFGLVKDIARFRKDLKLLISSATLDAEKFSSFFDDAPIFRIPGRRFPVD 545
Query: 291 VLYTKEPETDYLDASLITVMQIHLREP-PGDVLLFLTGKLDVRKQLLGIMDRHK 343
+ YT+ PE DY+DA+++T+MQIHL +P PGD+L+FLTG+ ++ +M+R K
Sbjct: 546 IYYTQAPEADYVDAAIVTIMQIHLTQPLPGDILVFLTGQEEIETVQEALMERSK 599
Score = 249 (92.7 bits), Expect = 1.4e-44, Sum P(2) = 1.4e-44
Identities = 48/123 (39%), Positives = 79/123 (64%)
Query: 330 DVRKQLLGIMDRHKLDVVSAGKNTVRVQKAVCSGFFRNAAKKDPQEGYRTLVDSQVVYIH 389
DVR QL+G+++R +++ S+ +T++++KA+ +G+F N +K D Y+T+ + H
Sbjct: 879 DVRDQLVGLLERVEIETKSS-TDTIKIRKAITAGYFYNVSKLDNTGHYKTVKHKHTTHPH 937
Query: 390 PSSALFNRQPEWVIYHELVQTTKEYMREVTSIDPKWLVEFAPAFFK---FSDPTKLSKFK 446
P+S LF P WV+Y ELV T+KE+MRE++ I+ WL+E AP ++K D T K
Sbjct: 938 PNSCLFEETPRWVVYFELVFTSKEFMREMSEIESGWLLEVAPHYYKGRELEDATN-KKMP 996
Query: 447 KNQ 449
KN+
Sbjct: 997 KNK 999
Score = 235 (87.8 bits), Expect = 4.1e-43, Sum P(2) = 4.1e-43
Identities = 47/75 (62%), Positives = 59/75 (78%)
Query: 468 REEIDTACEILYERMKSLGPDVPELIILPVYSALPSEMQTRIFEAAPPGSRKVVIATNIA 527
+EEI+T E L ER K+LG + ELI LPVY+ LPS++Q +IFE P +RKVV+ATNIA
Sbjct: 584 QEEIETVQEALMERSKALGSKIKELIPLPVYANLPSDLQAKIFEPTPKDARKVVLATNIA 643
Query: 528 ETSLTIDGIFYVVDP 542
ETS+TIDGI YV+DP
Sbjct: 644 ETSVTIDGINYVIDP 658
Score = 39 (18.8 bits), Expect = 1.4e-22, Sum P(2) = 1.4e-22
Identities = 12/40 (30%), Positives = 18/40 (45%)
Query: 423 PKWLVEFAPAFFKFSDPTKLSKFKKNQRLE--PLYNKYEE 460
P+W+V F F ++S+ + LE P Y K E
Sbjct: 947 PRWVVYFELVFTSKEFMREMSEIESGWLLEVAPHYYKGRE 986
>UNIPROTKB|O45244 [details] [associations]
symbol:mog-4 "Probable pre-mRNA-splicing factor
ATP-dependent RNA helicase mog-4" species:6239 "Caenorhabditis
elegans" [GO:0005515 "protein binding" evidence=IPI]
InterPro:IPR001482 InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 Pfam:PF00271 Pfam:PF00437 Pfam:PF04408
PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
GO:GO:0005524 GO:GO:0005634 GO:GO:0009792 GO:GO:0002119
GO:GO:0008380 GO:GO:0006810 GO:GO:0018996 GO:GO:0006397
GO:GO:0003676 GO:GO:0042127 GO:GO:0040035 GO:GO:0007281
GO:GO:0048589 GO:GO:0010172 GO:GO:0040020 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709
Pfam:PF07717 GO:GO:0040022 GO:GO:0008026 HOGENOM:HOG000175261
KO:K12813 EMBL:AF286900 EMBL:Z81462 EMBL:Z81457 PIR:T18832
RefSeq:NP_497027.1 UniGene:Cel.17139 ProteinModelPortal:O45244
SMR:O45244 DIP:DIP-24771N IntAct:O45244 MINT:MINT-1105817
STRING:O45244 PaxDb:O45244 EnsemblMetazoa:C04H5.6 GeneID:175117
KEGG:cel:CELE_C04H5.6 UCSC:C04H5.6 CTD:175117 WormBase:C04H5.6
GeneTree:ENSGT00700000104241 InParanoid:O45244 OMA:GTLHREF
NextBio:886834 ArrayExpress:O45244 Uniprot:O45244
Length = 1008
Score = 497 (180.0 bits), Expect = 1.6e-46, P = 1.6e-46
Identities = 96/222 (43%), Positives = 142/222 (63%)
Query: 11 QMAEFPLEPNLSKMLIMSVHLQCSDEVLTIVSMLSVQN-VFYRPXXXXXXXXXXXXXFNQ 69
+MAEFP +P +SKM+I S +CS+E++TI +MLS VFYRP F
Sbjct: 780 RMAEFPCDPCMSKMIIASEKYECSEEIVTIAAMLSCNAAVFYRPKAQVIHADSARKGFWS 839
Query: 70 MEGDHITLLAVYNSWRNNKFSNAWCYENFVQIRTLKRAQDVRKQLLGIMDRHKLDVVSAG 129
GDHITL+ VYN W+ + FS WC EN+VQ RT+KRA+DVR QL+G+++R +++ S+
Sbjct: 840 PAGDHITLMNVYNKWQESSFSQRWCVENYVQHRTMKRARDVRDQLVGLLERVEIETKSS- 898
Query: 130 KNTVRVQKAVCSGFFRNAAKKDPQEGYRTLVDSQVVYIHPSSALFNRQPEWVIYHELVQT 189
+T++++KA+ +G+F N +K D Y+T+ + HP+S LF P WV+Y ELV T
Sbjct: 899 TDTIKIRKAITAGYFYNVSKLDNTGHYKTVKHKHTTHPHPNSCLFEETPRWVVYFELVFT 958
Query: 190 TKEYMREVTSIDPKWLVEFAPAFFK---FSDPTKLSKFKKNQ 228
+KE+MRE++ I+ WL+E AP ++K D T K KN+
Sbjct: 959 SKEFMREMSEIESGWLLEVAPHYYKGRELEDATN-KKMPKNK 999
Score = 301 (111.0 bits), Expect = 1.4e-44, Sum P(2) = 1.4e-44
Identities = 57/114 (50%), Positives = 83/114 (72%)
Query: 231 EPLQRTNRISFPPGLLKQAVKKRPEIKLIVTSATLDAVKFSSYFFEAPIFTIPGRTFPVE 290
E +RT GL+K + R ++KL+++SATLDA KFSS+F +APIF IPGR FPV+
Sbjct: 486 EAHERTLHTDILFGLVKDIARFRKDLKLLISSATLDAEKFSSFFDDAPIFRIPGRRFPVD 545
Query: 291 VLYTKEPETDYLDASLITVMQIHLREP-PGDVLLFLTGKLDVRKQLLGIMDRHK 343
+ YT+ PE DY+DA+++T+MQIHL +P PGD+L+FLTG+ ++ +M+R K
Sbjct: 546 IYYTQAPEADYVDAAIVTIMQIHLTQPLPGDILVFLTGQEEIETVQEALMERSK 599
Score = 249 (92.7 bits), Expect = 1.4e-44, Sum P(2) = 1.4e-44
Identities = 48/123 (39%), Positives = 79/123 (64%)
Query: 330 DVRKQLLGIMDRHKLDVVSAGKNTVRVQKAVCSGFFRNAAKKDPQEGYRTLVDSQVVYIH 389
DVR QL+G+++R +++ S+ +T++++KA+ +G+F N +K D Y+T+ + H
Sbjct: 879 DVRDQLVGLLERVEIETKSS-TDTIKIRKAITAGYFYNVSKLDNTGHYKTVKHKHTTHPH 937
Query: 390 PSSALFNRQPEWVIYHELVQTTKEYMREVTSIDPKWLVEFAPAFFK---FSDPTKLSKFK 446
P+S LF P WV+Y ELV T+KE+MRE++ I+ WL+E AP ++K D T K
Sbjct: 938 PNSCLFEETPRWVVYFELVFTSKEFMREMSEIESGWLLEVAPHYYKGRELEDATN-KKMP 996
Query: 447 KNQ 449
KN+
Sbjct: 997 KNK 999
Score = 235 (87.8 bits), Expect = 4.1e-43, Sum P(2) = 4.1e-43
Identities = 47/75 (62%), Positives = 59/75 (78%)
Query: 468 REEIDTACEILYERMKSLGPDVPELIILPVYSALPSEMQTRIFEAAPPGSRKVVIATNIA 527
+EEI+T E L ER K+LG + ELI LPVY+ LPS++Q +IFE P +RKVV+ATNIA
Sbjct: 584 QEEIETVQEALMERSKALGSKIKELIPLPVYANLPSDLQAKIFEPTPKDARKVVLATNIA 643
Query: 528 ETSLTIDGIFYVVDP 542
ETS+TIDGI YV+DP
Sbjct: 644 ETSVTIDGINYVIDP 658
Score = 39 (18.8 bits), Expect = 1.4e-22, Sum P(2) = 1.4e-22
Identities = 12/40 (30%), Positives = 18/40 (45%)
Query: 423 PKWLVEFAPAFFKFSDPTKLSKFKKNQRLE--PLYNKYEE 460
P+W+V F F ++S+ + LE P Y K E
Sbjct: 947 PRWVVYFELVFTSKEFMREMSEIESGWLLEVAPHYYKGRE 986
>DICTYBASE|DDB_G0285843 [details] [associations]
symbol:helD "putative RNA splicing factor"
species:44689 "Dictyostelium discoideum" [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0005681
"spliceosomal complex" evidence=ISS] [GO:0004004 "ATP-dependent RNA
helicase activity" evidence=ISS] [GO:0000398 "mRNA splicing, via
spliceosome" evidence=ISS] [GO:0000375 "RNA splicing, via
transesterification reactions" evidence=ISS] [GO:0016787 "hydrolase
activity" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 dictyBase:DDB_G0285843 GO:GO:0005524
GenomeReviews:CM000153_GR GO:GO:0005681 GO:GO:0003676
EMBL:AAFI02000082 GO:GO:0000398 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717 GO:GO:0004004
KO:K12815 RefSeq:XP_638016.1 EnsemblProtists:DDB0191460
GeneID:8625367 KEGG:ddi:DDB_G0285843 InParanoid:Q54MH4
ProtClustDB:CLSZ2846702 Uniprot:Q54MH4
Length = 1387
Score = 483 (175.1 bits), Expect = 5.1e-46, Sum P(2) = 5.1e-46
Identities = 92/232 (39%), Positives = 145/232 (62%)
Query: 6 VTPISQ-MAEFPLEPNLSKMLIMSVHLQCSDEVLTIVSMLSVQNVFYRPXXXXXXXXXXX 64
+TP+ + M+EFPL+P LSKM+I++ L C +++TIVSMLS+ +VFYRP
Sbjct: 1067 ITPLGKRMSEFPLDPPLSKMVIVAEQLGCGQDIVTIVSMLSMPSVFYRPKGAEEESDASR 1126
Query: 65 XXFNQMEGDHITLLAVYNSWRNNKFSNAWCYENFVQIRTLKRAQDVRKQLLGIMDRHKLD 124
F E DH+TLL VY W+ N +S+ WC E+++ I+ +++ ++VR QLL IM +H +
Sbjct: 1127 EKFFVPESDHLTLLHVYQQWKINNYSSQWCAEHYIHIKAMRKVREVRGQLLDIMVQHDMK 1186
Query: 125 VVSAGKNTVRVQKAVCSGFFRNAAKKDPQEGYRTLVDSQVVYIHPSSALFNR--QPEWVI 182
V S G N ++KA+ S +F ++AK Y + + ++HP+SAL+ P++++
Sbjct: 1187 VESCGSNWDIIRKAITSSYFHHSAKIKGIGEYVNMRNGMPCFLHPTSALYGLGYAPDYIV 1246
Query: 183 YHELVQTTKEYMREVTSIDPKWLVEFAPAFFKFSDPTKLSKFKKNQRLEPLQ 234
YHELV T+KEYM+ VT++DP WL E P FF K K ++L+P++
Sbjct: 1247 YHELVMTSKEYMQIVTAVDPNWLAEMGPMFFSIKKSLK----DKKRKLDPIK 1294
Score = 266 (98.7 bits), Expect = 4.4e-40, Sum P(2) = 4.4e-40
Identities = 53/129 (41%), Positives = 86/129 (66%)
Query: 215 FSDPTKLSKFKKNQRLEPLQRTNRISFPPGLLKQAVKKRPEIKLIVTSATLDAVKFSSYF 274
F+DP L K+ E +R+ G+LK+ + +R ++KLIVTSAT+D+ KFS +F
Sbjct: 765 FNDPN-LDKYSAIIMDEAHERSLNTDVLFGILKKVMSRRYDMKLIVTSATMDSKKFSMFF 823
Query: 275 FEAPIFTIPGRTFPVEVLYTKEPETDYLDASLITVMQIHLREPPGDVLLFLTGKLDVRKQ 334
+ P+FTIPGRTFPV+VL++K P DY+D+++ ++ IH+ + GD+L+F+TG+ D+
Sbjct: 824 GDVPVFTIPGRTFPVDVLWSKTPCEDYVDSAVKQILSIHVTQGVGDILVFMTGQEDIETT 883
Query: 335 LLGIMDRHK 343
+ +R K
Sbjct: 884 CATVEERIK 892
Score = 248 (92.4 bits), Expect = 4.4e-40, Sum P(2) = 4.4e-40
Identities = 46/74 (62%), Positives = 58/74 (78%)
Query: 468 REEIDTACEILYERMKSLGPDVPELIILPVYSALPSEMQTRIFEAAPPGSRKVVIATNIA 527
+E+I+T C + ER+K LGP P L +LP+YS LPS+MQ +IFE A GSRK +IATNIA
Sbjct: 877 QEDIETTCATVEERIKQLGPQAPPLTLLPIYSQLPSDMQAKIFEKADNGSRKCIIATNIA 936
Query: 528 ETSLTIDGIFYVVD 541
ETSLT+DGI YV+D
Sbjct: 937 ETSLTVDGILYVID 950
Score = 244 (91.0 bits), Expect = 1.2e-39, Sum P(2) = 1.2e-39
Identities = 50/133 (37%), Positives = 79/133 (59%)
Query: 330 DVRKQLLGIMDRHKLDVVSAGKNTVRVQKAVCSGFFRNAAKKDPQEGYRTLVDSQVVYIH 389
+VR QLL IM +H + V S G N ++KA+ S +F ++AK Y + + ++H
Sbjct: 1171 EVRGQLLDIMVQHDMKVESCGSNWDIIRKAITSSYFHHSAKIKGIGEYVNMRNGMPCFLH 1230
Query: 390 PSSALFNR--QPEWVIYHELVQTTKEYMREVTSIDPKWLVEFAPAFFKFSDPTKLSKFKK 447
P+SAL+ P++++YHELV T+KEYM+ VT++DP WL E P FF K K
Sbjct: 1231 PTSALYGLGYAPDYIVYHELVMTSKEYMQIVTAVDPNWLAEMGPMFFSIKKSLK----DK 1286
Query: 448 NQRLEPLYNKYEE 460
++L+P+ +K +
Sbjct: 1287 KRKLDPIKDKIND 1299
Score = 42 (19.8 bits), Expect = 5.1e-46, Sum P(2) = 5.1e-46
Identities = 9/11 (81%), Positives = 10/11 (90%)
Query: 1 MDSLVVTPISQ 11
MDSL VTPIS+
Sbjct: 965 MDSLQVTPISK 975
>SGD|S000001794 [details] [associations]
symbol:PRP16 "DEAH-box RNA helicase involved in second
catalytic step of splicing" species:4932 "Saccharomyces cerevisiae"
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0000350 "generation of catalytic
spliceosome for second transesterification step" evidence=IMP]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0008380 "RNA
splicing" evidence=IEA] [GO:0006397 "mRNA processing" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0071007 "U2-type catalytic step 2 spliceosome" evidence=IDA]
[GO:0008186 "RNA-dependent ATPase activity" evidence=IDA]
[GO:0000386 "second spliceosomal transesterification activity"
evidence=IMP] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 SGD:S000001794 GO:GO:0005524 GO:GO:0003676
EMBL:BK006944 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
HOGENOM:HOG000175261 GO:GO:0071007 EMBL:Z27116 GO:GO:0008186
RefSeq:NP_013012.3 GeneID:853961 KEGG:sce:YKR086W KO:K12815
GO:GO:0000350 GeneTree:ENSGT00700000104877 OrthoDB:EOG4GQTD2
EMBL:M31524 EMBL:Z28311 PIR:S38164 RefSeq:NP_013014.3
ProteinModelPortal:P15938 SMR:P15938 DIP:DIP-2824N IntAct:P15938
MINT:MINT-1699731 STRING:P15938 PaxDb:P15938 PeptideAtlas:P15938
EnsemblFungi:YKR086W GeneID:853963 KEGG:sce:YKR088C CYGD:YKR086w
OMA:IDCGYSK NextBio:975386 Genevestigator:P15938 GermOnline:YKR086W
Uniprot:P15938
Length = 1071
Score = 475 (172.3 bits), Expect = 7.4e-46, Sum P(2) = 7.4e-46
Identities = 97/206 (47%), Positives = 135/206 (65%)
Query: 6 VTPIS-QMAEFPLEPNLSKMLIMSVHLQCSDEVLTIVSMLSVQNVFYRPXXXXXXXXXXX 64
+TP+ QMA+FPL+P+LSK+L+++V CSDE+LTIVSMLSV VFYRP
Sbjct: 773 LTPLGLQMAKFPLQPSLSKILLIAVRNGCSDEMLTIVSMLSVPQVFYRPKERQKEADIAR 832
Query: 65 XXFNQMEGDHITLLAVYNSWRNNKFSNAWCYENFVQIRTLKRAQDVRKQLLGIMDRHKLD 124
F + DH+TLL V+ WR N FS+ WC ++FVQ ++L RA+D+R QLL I+ K+
Sbjct: 833 NKFFIAKSDHLTLLNVFEQWRANNFSSHWCNKHFVQYKSLVRARDIRDQLLTILKSQKIP 892
Query: 125 VVSAGKNTVRVQKAVCSGFFRNAAKKDPQEGYRTLVDSQVVYIHPSSAL--FNRQPEWVI 182
V+S+GK+ ++K +CSGF AAK Y L V +HP+SAL P +V+
Sbjct: 893 VISSGKDWDIIKKCICSGFAHQAAKITGLRNYVHLKTGVSVQLHPTSALHGLGDLPPYVV 952
Query: 183 YHELVQTTKEYMREVTSIDPKWLVEF 208
YHEL+ T+KEY+ VTS+DP WL+E+
Sbjct: 953 YHELLMTSKEYICCVTSVDPFWLMEY 978
Score = 230 (86.0 bits), Expect = 8.5e-33, Sum P(2) = 8.5e-33
Identities = 43/90 (47%), Positives = 65/90 (72%)
Query: 244 GLLKQAVKKRPEIKLIVTSATLDAVKFSSYFFEAPIFTIPGRTFPVEVLYTKEPETDYLD 303
G K + +R ++KLI+TSAT++A KFS++F AP FTIPGRTFPV+ +YT P DY++
Sbjct: 487 GFFKILLARRRDLKLIITSATMNAKKFSAFFGNAPQFTIPGRTFPVQTIYTSNPVQDYVE 546
Query: 304 ASLITVMQIHLREP--PGDVLLFLTGKLDV 331
A++ ++IHL GD+L+F+TG+ D+
Sbjct: 547 AAVSQAVKIHLANDCSSGDILIFMTGQEDI 576
Score = 214 (80.4 bits), Expect = 8.5e-33, Sum P(2) = 8.5e-33
Identities = 45/102 (44%), Positives = 64/102 (62%)
Query: 330 DVRKQLLGIMDRHKLDVVSAGKNTVRVQKAVCSGFFRNAAKKDPQEGYRTLVDSQVVYIH 389
D+R QLL I+ K+ V+S+GK+ ++K +CSGF AAK Y L V +H
Sbjct: 877 DIRDQLLTILKSQKIPVISSGKDWDIIKKCICSGFAHQAAKITGLRNYVHLKTGVSVQLH 936
Query: 390 PSSAL--FNRQPEWVIYHELVQTTKEYMREVTSIDPKWLVEF 429
P+SAL P +V+YHEL+ T+KEY+ VTS+DP WL+E+
Sbjct: 937 PTSALHGLGDLPPYVVYHELLMTSKEYICCVTSVDPFWLMEY 978
Score = 163 (62.4 bits), Expect = 1.9e-27, Sum P(2) = 1.9e-27
Identities = 37/83 (44%), Positives = 55/83 (66%)
Query: 468 REEIDTACEILYERM-----KSLGP----DVPELIILPVYSALPSEMQTRIFEAAPPGSR 518
+E+I+T + L E+ K G ++ ++ ILP+YSALP+++Q +IF+ R
Sbjct: 573 QEDIETTFDTLQEKFLQVYSKKFGTANFEEINDIEILPIYSALPADLQFKIFQDLHGTKR 632
Query: 519 KVVIATNIAETSLTIDGIFYVVD 541
K++IATNIAETSLTI GI YV+D
Sbjct: 633 KIIIATNIAETSLTIKGIRYVID 655
Score = 44 (20.5 bits), Expect = 7.4e-46, Sum P(2) = 7.4e-46
Identities = 8/11 (72%), Positives = 11/11 (100%)
Query: 1 MDSLVVTPISQ 11
+DSLV+TPIS+
Sbjct: 670 LDSLVITPISK 680
>WB|WBGene00003389 [details] [associations]
symbol:mog-1 species:6239 "Caenorhabditis elegans"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0009792 "embryo development ending in birth or
egg hatching" evidence=IMP] [GO:0002119 "nematode larval
development" evidence=IMP] [GO:0010171 "body morphogenesis"
evidence=IMP] [GO:0006898 "receptor-mediated endocytosis"
evidence=IMP] [GO:0042127 "regulation of cell proliferation"
evidence=IMP] [GO:0040020 "regulation of meiosis" evidence=IMP]
[GO:0007281 "germ cell development" evidence=IMP] [GO:0040022
"feminization of hermaphroditic germ-line" evidence=IMP]
[GO:0005515 "protein binding" evidence=IPI] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0005634 GO:GO:0009792 GO:GO:0006898 GO:GO:0002119
GO:GO:0008380 GO:GO:0006397 GO:GO:0010171 GO:GO:0003676
GO:GO:0042127 GO:GO:0007281 GO:GO:0040020 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709
Pfam:PF07717 GO:GO:0040022 GO:GO:0008026 HOGENOM:HOG000175261
EMBL:Z29560 KO:K12815 EMBL:AF120269 PIR:F88570 PIR:S41025
RefSeq:NP_499212.1 UniGene:Cel.5743 ProteinModelPortal:P34498
SMR:P34498 IntAct:P34498 STRING:P34498 PaxDb:P34498 PRIDE:P34498
EnsemblMetazoa:K03H1.2 GeneID:176409 KEGG:cel:CELE_K03H1.2
UCSC:K03H1.2.1 CTD:176409 WormBase:K03H1.2
GeneTree:ENSGT00700000104877 InParanoid:P34498 OMA:PSRSTWE
NextBio:892452 Uniprot:P34498
Length = 1131
Score = 482 (174.7 bits), Expect = 8.8e-45, P = 8.8e-45
Identities = 100/253 (39%), Positives = 149/253 (58%)
Query: 6 VTPISQ-MAEFPLEPNLSKMLIMSVHLQCSDEVLTIVSMLSVQNVFYRPXXXXXXXXXXX 64
+TP+ + M EFPL+P LSKMLIMS + CSDEVLTIVSMLSV +F+RP
Sbjct: 849 LTPMGRKMVEFPLDPTLSKMLIMSAEMGCSDEVLTIVSMLSVPAIFFRPKGREEEADAKK 908
Query: 65 XXFNQMEGDHITLLAVYNSWRNNKFSNAWCYENFVQIRTLKRAQDVRKQLLGIMDRHKLD 124
F E DH+T L VY WR +K+S WC +N++ ++ LK+ ++VR QL IM KL
Sbjct: 909 EKFQVPESDHLTFLNVYIQWRTHKYSAKWCADNYLHVKALKKVREVRAQLKEIMQDLKLP 968
Query: 125 VVSAGKNTVRVQKAVCSGFFRNAAKKDPQEGYRTLVDSQVVYIHPSSALFNR--QPEWVI 182
++S G V+K +CS +F NAA+ Y + ++HP+SALF P++V+
Sbjct: 969 LISNGSEWDIVRKCICSAYFHNAARLKGIGEYVNVRTGIPCFLHPTSALFGMGFMPDYVV 1028
Query: 183 YHELVQTTKEYMREVTSIDPKWLVEFAPAFFKFSDPTKLSKFKKNQRLEPLQRTNRISFP 242
YHEL+ T KEYM+ VT++D WL E P F+ + +K S+ K ++E ++ +
Sbjct: 1029 YHELIMTAKEYMQCVTAVDAIWLAELGPMFYSIKE-SKQSR--KELKMESVRTVETMEAE 1085
Query: 243 PGLLKQAVKKRPE 255
++ +++R E
Sbjct: 1086 MREAQKEMERRKE 1098
Score = 233 (87.1 bits), Expect = 3.6e-33, Sum P(2) = 3.6e-33
Identities = 48/104 (46%), Positives = 70/104 (67%)
Query: 244 GLLKQAVKKRPEIKLIVTSATLDAVKFSSYFF-EAPIFTIPGRTFPVEVLYTKEPETDYL 302
GLL++ + KR ++KLIVTSAT+DA KF+ +F P FTIPGRTFPVE+ + + P DY+
Sbjct: 575 GLLREVIAKRADLKLIVTSATMDADKFADFFGGNCPTFTIPGRTFPVELFHARTPVEDYV 634
Query: 303 DASLITVMQIHLREPPGDVLLFLTGKLDVR------KQLLGIMD 340
DA++ + IHL GD+L+F+ G+ D+ K+ LG +D
Sbjct: 635 DAAVKQAVTIHLGGMDGDILIFMPGQEDIECTCEMIKEKLGELD 678
Score = 222 (83.2 bits), Expect = 5.4e-14, Sum P(2) = 5.4e-14
Identities = 39/75 (52%), Positives = 58/75 (77%)
Query: 468 REEIDTACEILYERMKSLGPDVPELIILPVYSALPSEMQTRIFEAAPPGSRKVVIATNIA 527
+E+I+ CE++ E++ L + P L +LP+YS LPS++Q +IF+ AP G RK ++ATNIA
Sbjct: 660 QEDIECTCEMIKEKLGELD-EAPPLAVLPIYSQLPSDLQAKIFQRAPGGMRKAIVATNIA 718
Query: 528 ETSLTIDGIFYVVDP 542
ETSLT+DGI +V+DP
Sbjct: 719 ETSLTVDGILFVIDP 733
Score = 215 (80.7 bits), Expect = 3.6e-33, Sum P(2) = 3.6e-33
Identities = 48/125 (38%), Positives = 72/125 (57%)
Query: 330 DVRKQLLGIMDRHKLDVVSAGKNTVRVQKAVCSGFFRNAAKKDPQEGYRTLVDSQVVYIH 389
+VR QL IM KL ++S G V+K +CS +F NAA+ Y + ++H
Sbjct: 953 EVRAQLKEIMQDLKLPLISNGSEWDIVRKCICSAYFHNAARLKGIGEYVNVRTGIPCFLH 1012
Query: 390 PSSALFNR--QPEWVIYHELVQTTKEYMREVTSIDPKWLVEFAPAFFKFSDPTKLSKFKK 447
P+SALF P++V+YHEL+ T KEYM+ VT++D WL E P F+ + +K S+ K
Sbjct: 1013 PTSALFGMGFMPDYVVYHELIMTAKEYMQCVTAVDAIWLAELGPMFYSIKE-SKQSR--K 1069
Query: 448 NQRLE 452
++E
Sbjct: 1070 ELKME 1074
Score = 43 (20.2 bits), Expect = 5.4e-14, Sum P(2) = 5.4e-14
Identities = 15/65 (23%), Positives = 24/65 (36%)
Query: 412 KEYMREVTSIDPKWLVEFA----PAFFKFSDPTKLSKFKKNQRLEPLYNKYEEPNAWRIS 467
K YM SI W E + P + K ++ EP ++ EE W
Sbjct: 166 KRYMDSERSISSAWRSERRNRDDEKRRRHRKPEDSVRSVKEEKAEPTFHDDEERAQWEEE 225
Query: 468 REEID 472
++ +D
Sbjct: 226 QKNLD 230
>UNIPROTKB|P34498 [details] [associations]
symbol:mog-1 "Probable pre-mRNA-splicing factor
ATP-dependent RNA helicase mog-1" species:6239 "Caenorhabditis
elegans" [GO:0005515 "protein binding" evidence=IPI]
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408
PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
GO:GO:0005524 GO:GO:0005634 GO:GO:0009792 GO:GO:0006898
GO:GO:0002119 GO:GO:0008380 GO:GO:0006397 GO:GO:0010171
GO:GO:0003676 GO:GO:0042127 GO:GO:0007281 GO:GO:0040020
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643
InterPro:IPR011709 Pfam:PF07717 GO:GO:0040022 GO:GO:0008026
HOGENOM:HOG000175261 EMBL:Z29560 KO:K12815 EMBL:AF120269 PIR:F88570
PIR:S41025 RefSeq:NP_499212.1 UniGene:Cel.5743
ProteinModelPortal:P34498 SMR:P34498 IntAct:P34498 STRING:P34498
PaxDb:P34498 PRIDE:P34498 EnsemblMetazoa:K03H1.2 GeneID:176409
KEGG:cel:CELE_K03H1.2 UCSC:K03H1.2.1 CTD:176409 WormBase:K03H1.2
GeneTree:ENSGT00700000104877 InParanoid:P34498 OMA:PSRSTWE
NextBio:892452 Uniprot:P34498
Length = 1131
Score = 482 (174.7 bits), Expect = 8.8e-45, P = 8.8e-45
Identities = 100/253 (39%), Positives = 149/253 (58%)
Query: 6 VTPISQ-MAEFPLEPNLSKMLIMSVHLQCSDEVLTIVSMLSVQNVFYRPXXXXXXXXXXX 64
+TP+ + M EFPL+P LSKMLIMS + CSDEVLTIVSMLSV +F+RP
Sbjct: 849 LTPMGRKMVEFPLDPTLSKMLIMSAEMGCSDEVLTIVSMLSVPAIFFRPKGREEEADAKK 908
Query: 65 XXFNQMEGDHITLLAVYNSWRNNKFSNAWCYENFVQIRTLKRAQDVRKQLLGIMDRHKLD 124
F E DH+T L VY WR +K+S WC +N++ ++ LK+ ++VR QL IM KL
Sbjct: 909 EKFQVPESDHLTFLNVYIQWRTHKYSAKWCADNYLHVKALKKVREVRAQLKEIMQDLKLP 968
Query: 125 VVSAGKNTVRVQKAVCSGFFRNAAKKDPQEGYRTLVDSQVVYIHPSSALFNR--QPEWVI 182
++S G V+K +CS +F NAA+ Y + ++HP+SALF P++V+
Sbjct: 969 LISNGSEWDIVRKCICSAYFHNAARLKGIGEYVNVRTGIPCFLHPTSALFGMGFMPDYVV 1028
Query: 183 YHELVQTTKEYMREVTSIDPKWLVEFAPAFFKFSDPTKLSKFKKNQRLEPLQRTNRISFP 242
YHEL+ T KEYM+ VT++D WL E P F+ + +K S+ K ++E ++ +
Sbjct: 1029 YHELIMTAKEYMQCVTAVDAIWLAELGPMFYSIKE-SKQSR--KELKMESVRTVETMEAE 1085
Query: 243 PGLLKQAVKKRPE 255
++ +++R E
Sbjct: 1086 MREAQKEMERRKE 1098
Score = 233 (87.1 bits), Expect = 3.6e-33, Sum P(2) = 3.6e-33
Identities = 48/104 (46%), Positives = 70/104 (67%)
Query: 244 GLLKQAVKKRPEIKLIVTSATLDAVKFSSYFF-EAPIFTIPGRTFPVEVLYTKEPETDYL 302
GLL++ + KR ++KLIVTSAT+DA KF+ +F P FTIPGRTFPVE+ + + P DY+
Sbjct: 575 GLLREVIAKRADLKLIVTSATMDADKFADFFGGNCPTFTIPGRTFPVELFHARTPVEDYV 634
Query: 303 DASLITVMQIHLREPPGDVLLFLTGKLDVR------KQLLGIMD 340
DA++ + IHL GD+L+F+ G+ D+ K+ LG +D
Sbjct: 635 DAAVKQAVTIHLGGMDGDILIFMPGQEDIECTCEMIKEKLGELD 678
Score = 222 (83.2 bits), Expect = 5.4e-14, Sum P(2) = 5.4e-14
Identities = 39/75 (52%), Positives = 58/75 (77%)
Query: 468 REEIDTACEILYERMKSLGPDVPELIILPVYSALPSEMQTRIFEAAPPGSRKVVIATNIA 527
+E+I+ CE++ E++ L + P L +LP+YS LPS++Q +IF+ AP G RK ++ATNIA
Sbjct: 660 QEDIECTCEMIKEKLGELD-EAPPLAVLPIYSQLPSDLQAKIFQRAPGGMRKAIVATNIA 718
Query: 528 ETSLTIDGIFYVVDP 542
ETSLT+DGI +V+DP
Sbjct: 719 ETSLTVDGILFVIDP 733
Score = 215 (80.7 bits), Expect = 3.6e-33, Sum P(2) = 3.6e-33
Identities = 48/125 (38%), Positives = 72/125 (57%)
Query: 330 DVRKQLLGIMDRHKLDVVSAGKNTVRVQKAVCSGFFRNAAKKDPQEGYRTLVDSQVVYIH 389
+VR QL IM KL ++S G V+K +CS +F NAA+ Y + ++H
Sbjct: 953 EVRAQLKEIMQDLKLPLISNGSEWDIVRKCICSAYFHNAARLKGIGEYVNVRTGIPCFLH 1012
Query: 390 PSSALFNR--QPEWVIYHELVQTTKEYMREVTSIDPKWLVEFAPAFFKFSDPTKLSKFKK 447
P+SALF P++V+YHEL+ T KEYM+ VT++D WL E P F+ + +K S+ K
Sbjct: 1013 PTSALFGMGFMPDYVVYHELIMTAKEYMQCVTAVDAIWLAELGPMFYSIKE-SKQSR--K 1069
Query: 448 NQRLE 452
++E
Sbjct: 1070 ELKME 1074
Score = 43 (20.2 bits), Expect = 5.4e-14, Sum P(2) = 5.4e-14
Identities = 15/65 (23%), Positives = 24/65 (36%)
Query: 412 KEYMREVTSIDPKWLVEFA----PAFFKFSDPTKLSKFKKNQRLEPLYNKYEEPNAWRIS 467
K YM SI W E + P + K ++ EP ++ EE W
Sbjct: 166 KRYMDSERSISSAWRSERRNRDDEKRRRHRKPEDSVRSVKEEKAEPTFHDDEERAQWEEE 225
Query: 468 REEID 472
++ +D
Sbjct: 226 QKNLD 230
>POMBASE|SPBC19C2.01 [details] [associations]
symbol:cdc28 "ATP-dependent RNA helicase Cdc28"
species:4896 "Schizosaccharomyces pombe" [GO:0004004 "ATP-dependent
RNA helicase activity" evidence=TAS] [GO:0005524 "ATP binding"
evidence=IC] [GO:0005681 "spliceosomal complex" evidence=IC]
[GO:0005682 "U5 snRNP" evidence=ISO] [GO:0045292 "mRNA cis
splicing, via spliceosome" evidence=IMP] [GO:0046540 "U4/U6 x U5
tri-snRNP complex" evidence=ISO] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 PomBase:SPBC19C2.01
GO:GO:0005524 EMBL:CU329671 GenomeReviews:CU329671_GR GO:GO:0005681
GO:GO:0005682 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
GO:GO:0046540 GO:GO:0004004 EMBL:U48733 PIR:T46568 PIR:T50372
RefSeq:NP_595686.2 ProteinModelPortal:Q10752 STRING:Q10752
EnsemblFungi:SPBC19C2.01.1 GeneID:2540707 KEGG:spo:SPBC19C2.01
HOGENOM:HOG000175261 KO:K12813 OMA:RIDDHRD OrthoDB:EOG4SBJ63
NextBio:20801829 GO:GO:0045292 Uniprot:Q10752
Length = 1055
Score = 480 (174.0 bits), Expect = 1.2e-44, P = 1.2e-44
Identities = 96/222 (43%), Positives = 143/222 (64%)
Query: 11 QMAEFPLEPNLSKMLIMSVHLQCSDEVLTIVSMLS-VQNVFYRPXXXXXXXXXXXXXFNQ 69
QMAEFP +P LSK LI S C +EVL+IVSML ++FYRP F Q
Sbjct: 833 QMAEFPTDPMLSKSLIASSKYGCVEEVLSIVSMLGEASSLFYRPKDKIMEADKARANFTQ 892
Query: 70 MEGDHITLLAVYNSWRNNKFSNAWCYENFVQIRTLKRAQDVRKQLLGIMDRHKLDVVSAG 129
GDH+TLL ++N W + FS W ENF+Q ++L RA+DVR QL + +R ++++V+
Sbjct: 893 PGGDHLTLLHIWNEWVDTDFSYNWARENFLQYKSLCRARDVRDQLANLCERVEIELVTNS 952
Query: 130 KNTVR-VQKAVCSGFFRNAAKKDPQ-EGYRTLVDSQVVYIHPSSALFNRQPEWVIYHELV 187
++ ++KA+ +G+F NAA+ D + YRT+ +Q VYIHPSS++ ++P+ +IY ELV
Sbjct: 953 SESLDPIKKAITAGYFSNAARLDRSGDSYRTVKSNQTVYIHPSSSVAEKKPKVIIYFELV 1012
Query: 188 QTTKEYMREVTSIDPKWLVEFAPAFFKFSDPTKLSKFKKNQR 229
TTKEY R++T I P+WL+E +P +FK P + + +K Q+
Sbjct: 1013 LTTKEYCRQITEIQPEWLLEISPHYFK---PENIEELQKTQK 1051
Score = 271 (100.5 bits), Expect = 1.5e-42, Sum P(2) = 1.5e-42
Identities = 46/101 (45%), Positives = 75/101 (74%)
Query: 231 EPLQRTNRISFPPGLLKQAVKKRPEIKLIVTSATLDAVKFSSYFFEAPIFTIPGRTFPVE 290
E +RT GL+K + RP++K++++SAT+DA KFS+YF EAP+F +PGR +PV+
Sbjct: 540 EAHERTLHTDILFGLVKDIARFRPDLKVLISSATIDAEKFSAYFDEAPVFYVPGRRYPVD 599
Query: 291 VLYTKEPETDYLDASLITVMQIHLREPPGDVLLFLTGKLDV 331
+ YT +PE +Y+ A++ T++QIH +P GD+L+FLTG+ ++
Sbjct: 600 IYYTPQPEANYIQAAITTILQIHTTQPAGDILVFLTGQDEI 640
Score = 263 (97.6 bits), Expect = 1.5e-42, Sum P(2) = 1.5e-42
Identities = 50/123 (40%), Positives = 84/123 (68%)
Query: 330 DVRKQLLGIMDRHKLDVVSAGKNTVR-VQKAVCSGFFRNAAKKDPQ-EGYRTLVDSQVVY 387
DVR QL + +R ++++V+ ++ ++KA+ +G+F NAA+ D + YRT+ +Q VY
Sbjct: 932 DVRDQLANLCERVEIELVTNSSESLDPIKKAITAGYFSNAARLDRSGDSYRTVKSNQTVY 991
Query: 388 IHPSSALFNRQPEWVIYHELVQTTKEYMREVTSIDPKWLVEFAPAFFKFSDPTKLSKFKK 447
IHPSS++ ++P+ +IY ELV TTKEY R++T I P+WL+E +P +FK P + + +K
Sbjct: 992 IHPSSSVAEKKPKVIIYFELVLTTKEYCRQITEIQPEWLLEISPHYFK---PENIEELQK 1048
Query: 448 NQR 450
Q+
Sbjct: 1049 TQK 1051
Score = 218 (81.8 bits), Expect = 7.7e-38, Sum P(2) = 7.7e-38
Identities = 39/74 (52%), Positives = 58/74 (78%)
Query: 468 REEIDTACEILYERMKSLGPDVPELIILPVYSALPSEMQTRIFEAAPPGSRKVVIATNIA 527
++EI+ E + E + LG +PE+I+ P+Y+ LPSE+Q +IF+ PPG+RKVV+ATNIA
Sbjct: 637 QDEIELMSENMQELCRILGKRIPEIILCPIYANLPSELQAKIFDPTPPGARKVVLATNIA 696
Query: 528 ETSLTIDGIFYVVD 541
ETS+TIDG+ +V+D
Sbjct: 697 ETSITIDGVNFVID 710
Score = 41 (19.5 bits), Expect = 2.0e-13, Sum P(2) = 2.0e-13
Identities = 7/23 (30%), Positives = 14/23 (60%)
Query: 440 TKLSKFKKNQRLEPLYNKYEEPN 462
T+ K + ++ E LY +Y++ N
Sbjct: 310 TEQGKLDRKRKEEVLYQRYKDSN 332
>POMBASE|SPBC16H5.10c [details] [associations]
symbol:prp43 "ATP-dependent RNA helicase Prp43
(predicted)" species:4896 "Schizosaccharomyces pombe" [GO:0000390
"spliceosomal complex disassembly" evidence=ISO] [GO:0004004
"ATP-dependent RNA helicase activity" evidence=ISO;ISS] [GO:0005524
"ATP binding" evidence=ISM] [GO:0005634 "nucleus" evidence=IDA]
[GO:0005681 "spliceosomal complex" evidence=ISO] [GO:0006364 "rRNA
processing" evidence=ISS] [GO:0030686 "90S preribosome"
evidence=ISS] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 PomBase:SPBC16H5.10c GO:GO:0005524 EMBL:CU329671
GenomeReviews:CU329671_GR GO:GO:0005681 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0030686
GO:GO:0006364 InterPro:IPR011709 Pfam:PF07717 GO:GO:0004004
HOGENOM:HOG000175261 GO:GO:0000390 KO:K12820 OMA:TVLQIHA
EMBL:AB027819 PIR:T39615 RefSeq:NP_595937.1
ProteinModelPortal:O42945 IntAct:O42945 STRING:O42945
EnsemblFungi:SPBC16H5.10c.1 GeneID:2540057 KEGG:spo:SPBC16H5.10c
OrthoDB:EOG4S7NZ4 NextBio:20801194 Uniprot:O42945
Length = 735
Score = 452 (164.2 bits), Expect = 3.4e-42, P = 3.4e-42
Identities = 92/218 (42%), Positives = 139/218 (63%)
Query: 6 VTPISQMA-EFPLEPNLSKMLIMSVHLQCSDEVLTIVSMLSVQNVFYRPXXXXXXXXXXX 64
+TP+ + A EFPL+PNL+ MLI S CS+EVL++ ++LSV NVF RP
Sbjct: 492 LTPLGRKASEFPLDPNLAVMLIRSPEFYCSNEVLSLTALLSVPNVFVRPNSARKLADEMR 551
Query: 65 XXFNQMEGDHITLLAVYNSWRNNKFSNAWCYENFVQIRTLKRAQDVRKQLLGIMDRHKLD 124
F +GDH+TLL VY+++++ + + WC+ +F+ R L A +VRKQL M+R +++
Sbjct: 552 QQFTHPDGDHLTLLNVYHAYKSGEGTADWCWNHFLSHRALISADNVRKQLRRTMERQEVE 611
Query: 125 VVSA---GKNT-VRVQKAVCSGFFRNAAKKDPQ-EGYRTLVDSQVVYIHPSSALFNRQPE 179
++S KN V +++A+ SGFF AKK + Y T+ D+QVV +HPS L + PE
Sbjct: 612 LISTPFDDKNYYVNIRRALVSGFFMQVAKKSANGKNYVTMKDNQVVSLHPSCGL-SVTPE 670
Query: 180 WVIYHELVQTTKEYMREVTSIDPKWLVEFAPAFFKFSD 217
WV+Y+E V TTK ++R VT+I P+WL+E AP ++ D
Sbjct: 671 WVVYNEFVLTTKSFIRNVTAIRPEWLIELAPNYYDLDD 708
Score = 305 (112.4 bits), Expect = 1.2e-44, Sum P(2) = 1.2e-44
Identities = 55/101 (54%), Positives = 77/101 (76%)
Query: 231 EPLQRTNRISFPPGLLKQAVKKRPEIKLIVTSATLDAVKFSSYFFEAPIFTIPGRTFPVE 290
E +RT GL+K+ +RP++K+IV SATLDA KF YFF+AP+ +PGRT+PVE
Sbjct: 198 EAHERTLATDILMGLMKRLATRRPDLKIIVMSATLDAKKFQKYFFDAPLLAVPGRTYPVE 257
Query: 291 VLYTKEPETDYLDASLITVMQIHLREPPGDVLLFLTGKLDV 331
+ YT+EPE DYL+A+L TV+QIH+ E PGD+L+FLTG+ ++
Sbjct: 258 IYYTQEPERDYLEAALRTVLQIHVEEGPGDILVFLTGEEEI 298
Score = 240 (89.5 bits), Expect = 1.2e-44, Sum P(2) = 1.2e-44
Identities = 50/114 (43%), Positives = 75/114 (65%)
Query: 330 DVRKQLLGIMDRHKLDVVSA---GKNT-VRVQKAVCSGFFRNAAKKDPQ-EGYRTLVDSQ 384
+VRKQL M+R +++++S KN V +++A+ SGFF AKK + Y T+ D+Q
Sbjct: 596 NVRKQLRRTMERQEVELISTPFDDKNYYVNIRRALVSGFFMQVAKKSANGKNYVTMKDNQ 655
Query: 385 VVYIHPSSALFNRQPEWVIYHELVQTTKEYMREVTSIDPKWLVEFAPAFFKFSD 438
VV +HPS L + PEWV+Y+E V TTK ++R VT+I P+WL+E AP ++ D
Sbjct: 656 VVSLHPSCGL-SVTPEWVVYNEFVLTTKSFIRNVTAIRPEWLIELAPNYYDLDD 708
Score = 162 (62.1 bits), Expect = 1.9e-36, Sum P(2) = 1.9e-36
Identities = 42/82 (51%), Positives = 49/82 (59%)
Query: 469 EEIDTACEILYERMKSL---GPDVPELIILPVYSALPSEMQTRIFEAAPPGS-----RKV 520
EEI+ AC + L G P L + P+Y +LP Q RIFE P + RKV
Sbjct: 296 EEIEDACRKITLEADDLVREGAAGP-LKVYPLYGSLPPNQQQRIFEPTPEDTKSGYGRKV 354
Query: 521 VIATNIAETSLTIDGIFYVVDP 542
VI+TNIAETSLTIDGI YVVDP
Sbjct: 355 VISTNIAETSLTIDGIVYVVDP 376
Score = 40 (19.1 bits), Expect = 1.2e-07, Sum P(2) = 1.2e-07
Identities = 19/66 (28%), Positives = 33/66 (50%)
Query: 295 KEPETDYLDA--SLITVMQIHLREPPGDVLLFLTGKLDVRKQLLGIMDRHKLDVVSAGKN 352
+E TD++ + S I + + H R D+L+ L +L R+ L K+ V+SA +
Sbjct: 180 REAMTDHMLSRYSCIILDEAHERTLATDILMGLMKRLATRRPDL------KIIVMSATLD 233
Query: 353 TVRVQK 358
+ QK
Sbjct: 234 AKKFQK 239
>UNIPROTKB|G4MTU4 [details] [associations]
symbol:MGG_11351 "Pre-mRNA-splicing factor ATP-dependent
RNA helicase prp16" species:242507 "Magnaporthe oryzae 70-15"
[GO:0005575 "cellular_component" evidence=ND] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
EMBL:CM001232 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
KO:K12815 RefSeq:XP_003713740.1 EnsemblFungi:MGG_11351T0
GeneID:5051310 KEGG:mgr:MGG_11351 Uniprot:G4MTU4
Length = 999
Score = 461 (167.3 bits), Expect = 2.7e-44, Sum P(2) = 2.7e-44
Identities = 89/209 (42%), Positives = 131/209 (62%)
Query: 11 QMAEFPLEPNLSKMLIMSVHLQCSDEVLTIVSMLSVQNVFYRPXXXXXXXXXXXXXFNQM 70
+M FP++P L+K++IM+ C++E++TIVSMLSV NVFYRP F
Sbjct: 716 KMNFFPMDPPLAKLIIMAEEYGCTEEMITIVSMLSVPNVFYRPKERQEESDAAREKFFVP 775
Query: 71 EGDHITLLAVYNSWRNNKFSNAWCYENFVQIRTLKRAQDVRKQLLGIMDRHKLDVVSAGK 130
E DH+T L VY+ W+ N S+AWC +F+ ++L+RA++VR QLL IM K+D+VS G
Sbjct: 776 ESDHLTFLHVYSQWKANGHSDAWCSRHFLHSKSLRRAKEVRDQLLDIMKTQKMDIVSCGT 835
Query: 131 NTVRVQKAVCSGFFRNAAKKDPQEGYRTLVDSQVVYIHPSSALFNRQ--PEWVIYHELVQ 188
+ V++ +CSG++ AAK Y L S V +HP+SAL+ P++V+YHEL+
Sbjct: 836 DWDVVRRCICSGYYHQAAKVKGIGEYINLRTSVTVQLHPTSALYGLGFLPDYVVYHELIL 895
Query: 189 TTKEYMREVTSIDPKWLVEFAPAFFKFSD 217
T+KEYM VTS+DP WL + F+ +
Sbjct: 896 TSKEYMSTVTSVDPMWLADLGGVFYSVKE 924
Score = 242 (90.2 bits), Expect = 1.2e-36, Sum P(2) = 1.2e-36
Identities = 46/105 (43%), Positives = 77/105 (73%)
Query: 244 GLLKQAVKKRPEIKLIVTSATLDAVKFSSYFFEAPIFTIPGRTFPVEVLYTKEPETDYLD 303
GL K+ +++R ++KLIVTSAT++A +FS +F AP FTIPGRTFPV+V++++ P DY+D
Sbjct: 437 GLFKKILQRRRDLKLIVTSATMNAKRFSDFFGGAPDFTIPGRTFPVDVMFSRSPVEDYVD 496
Query: 304 ASLITVMQIHLREPPGDVLLFLTGKLDVRKQLLGIMDRHKLDVVS 348
++ V+ IH+ GD+L+F+TG+ D+ ++ + R +LD ++
Sbjct: 497 QAVQQVLNIHVSMGTGDILVFMTGQEDI--EVTCELVRERLDALN 539
Score = 237 (88.5 bits), Expect = 1.2e-36, Sum P(2) = 1.2e-36
Identities = 52/136 (38%), Positives = 78/136 (57%)
Query: 330 DVRKQLLGIMDRHKLDVVSAGKNTVRVQKAVCSGFFRNAAKKDPQEGYRTLVDSQVVYIH 389
+VR QLL IM K+D+VS G + V++ +CSG++ AAK Y L S V +H
Sbjct: 814 EVRDQLLDIMKTQKMDIVSCGTDWDVVRRCICSGYYHQAAKVKGIGEYINLRTSVTVQLH 873
Query: 390 PSSALFNRQ--PEWVIYHELVQTTKEYMREVTSIDPKWLVEFAPAFFKFSDPTKLSKFKK 447
P+SAL+ P++V+YHEL+ T+KEYM VTS+DP WL + F+ + ++ K+
Sbjct: 874 PTSALYGLGFLPDYVVYHELILTSKEYMSTVTSVDPMWLADLGGVFYSVKEKGYSARDKR 933
Query: 448 NQRLEPLYNKYEEPNA 463
E +N+ E A
Sbjct: 934 VVETE--FNRKMEIEA 947
Score = 233 (87.1 bits), Expect = 7.1e-16, P = 7.1e-16
Identities = 42/74 (56%), Positives = 60/74 (81%)
Query: 468 REEIDTACEILYERMKSLGPDVPELIILPVYSALPSEMQTRIFEAAPPGSRKVVIATNIA 527
+E+I+ CE++ ER+ +L D P+L ILP+YS +P+++Q +IF+ APPG RK ++ATNIA
Sbjct: 521 QEDIEVTCELVRERLDALN-DPPKLSILPIYSQMPADLQAKIFDRAPPGVRKCIVATNIA 579
Query: 528 ETSLTIDGIFYVVD 541
ETSLT+DGI YVVD
Sbjct: 580 ETSLTVDGIMYVVD 593
Score = 42 (19.8 bits), Expect = 2.7e-44, Sum P(2) = 2.7e-44
Identities = 8/11 (72%), Positives = 10/11 (90%)
Query: 1 MDSLVVTPISQ 11
MD+L +TPISQ
Sbjct: 608 MDTLQITPISQ 618
>ASPGD|ASPL0000006947 [details] [associations]
symbol:AN5827 species:162425 "Emericella nidulans"
[GO:0008150 "biological_process" evidence=ND] [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0005575 "cellular_component" evidence=ND] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0003676 EMBL:BN001301 EMBL:AACD01000100 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 HOGENOM:HOG000175261 KO:K12813
OMA:RIDDHRD OrthoDB:EOG4SBJ63 RefSeq:XP_663431.1
ProteinModelPortal:Q5B0V3 EnsemblFungi:CADANIAT00007219
GeneID:2871194 KEGG:ani:AN5827.2 Uniprot:Q5B0V3
Length = 1128
Score = 461 (167.3 bits), Expect = 1.0e-43, Sum P(2) = 1.0e-43
Identities = 99/220 (45%), Positives = 134/220 (60%)
Query: 11 QMAEFPLEPNLSKMLIMSVHLQCSDEVLTIVSMLSVQN-VFYRPXXXXXXXXXXXXXFNQ 69
QMAEFP +P L+K ++ + C +EVL+IVSML + +F+RP F
Sbjct: 896 QMAEFPTDPMLAKAILAADKHGCVEEVLSIVSMLGEASALFFRPKDKKIHADSARNRFTV 955
Query: 70 MEG-DHITLLAVYNSWRNNKFSNAWCYENFVQIRTLKRAQDVRKQLLGIMDRHKLDVVSA 128
+G DH+TLL ++N W ++ FS W ENF+Q R+L RA+DVR QL + DR ++ V S
Sbjct: 956 KDGGDHLTLLNIWNQWVDSDFSYVWAKENFLQQRSLTRARDVRDQLAKLCDRVEVTVSSC 1015
Query: 129 GKNT-VRVQKAVCSGFFRNAAK-KDPQEGYRTLVDSQVVYIHPSSALFNRQPEWVIYHEL 186
G N V +QKA+ +GFF NAA+ + + YRT+ Q VY+HPSS LF P WVIY EL
Sbjct: 1016 GSNNIVPIQKAITAGFFPNAARLQRGGDSYRTIKTGQTVYLHPSSTLFEVNPRWVIYFEL 1075
Query: 187 VQTTKEYMREVTSIDPKWLVEFAPAFFKFSDPTKLSKFKK 226
V T+KEYMR + +WLVE AP ++K D L KK
Sbjct: 1076 VLTSKEYMRSNMPLQAEWLVEVAPHYYKKKDLETLGTEKK 1115
Score = 273 (101.2 bits), Expect = 9.4e-44, Sum P(2) = 9.4e-44
Identities = 51/101 (50%), Positives = 73/101 (72%)
Query: 231 EPLQRTNRISFPPGLLKQAVKKRPEIKLIVTSATLDAVKFSSYFFEAPIFTIPGRTFPVE 290
E +RT GLLK K RP++KL+++SAT+DA KF SYF APIF IPGR + V+
Sbjct: 603 EAHERTVPTDIACGLLKDIAKARPDLKLLISSATMDAQKFQSYFDNAPIFNIPGRMYNVD 662
Query: 291 VLYTKEPETDYLDASLITVMQIHLREPPGDVLLFLTGKLDV 331
+ YT++PE +YL A++ TV QIH+ + PGD+L+FLTG+ ++
Sbjct: 663 IHYTQQPEANYLAAAITTVFQIHVSQGPGDILVFLTGQEEI 703
Score = 273 (101.2 bits), Expect = 9.4e-44, Sum P(2) = 9.4e-44
Identities = 60/125 (48%), Positives = 76/125 (60%)
Query: 325 LTGKLDVRKQLLGIMDRHKLDVVSAGKNT-VRVQKAVCSGFFRNAAK-KDPQEGYRTLVD 382
LT DVR QL + DR ++ V S G N V +QKA+ +GFF NAA+ + + YRT+
Sbjct: 991 LTRARDVRDQLAKLCDRVEVTVSSCGSNNIVPIQKAITAGFFPNAARLQRGGDSYRTIKT 1050
Query: 383 SQVVYIHPSSALFNRQPEWVIYHELVQTTKEYMREVTSIDPKWLVEFAPAFFKFSDPTKL 442
Q VY+HPSS LF P WVIY ELV T+KEYMR + +WLVE AP ++K D L
Sbjct: 1051 GQTVYLHPSSTLFEVNPRWVIYFELVLTSKEYMRSNMPLQAEWLVEVAPHYYKKKDLETL 1110
Query: 443 SKFKK 447
KK
Sbjct: 1111 GTEKK 1115
Score = 237 (88.5 bits), Expect = 5.7e-40, Sum P(2) = 5.7e-40
Identities = 45/75 (60%), Positives = 59/75 (78%)
Query: 468 REEIDTACEILYERMKSLGPDVPELIILPVYSALPSEMQTRIFEAAPPGSRKVVIATNIA 527
+EEI+ A + L E + LG +PE+II P+Y+ LPS++Q +IFE PP +RKVV+ATNIA
Sbjct: 700 QEEIEAAEQSLQETARKLGNKIPEMIICPIYANLPSDLQAKIFEPTPPKARKVVLATNIA 759
Query: 528 ETSLTIDGIFYVVDP 542
ETSLTIDGI YV+DP
Sbjct: 760 ETSLTIDGIVYVIDP 774
Score = 39 (18.8 bits), Expect = 1.0e-43, Sum P(2) = 1.0e-43
Identities = 8/11 (72%), Positives = 10/11 (90%)
Query: 1 MDSLVVTPISQ 11
M+SLVVTP S+
Sbjct: 788 MESLVVTPCSR 798
Score = 39 (18.8 bits), Expect = 3.0e-19, Sum P(2) = 3.0e-19
Identities = 9/23 (39%), Positives = 12/23 (52%)
Query: 395 FNRQPEWVIYHELVQ-TTKEYMR 416
F +W Y+EL + TT E R
Sbjct: 817 FRLYTKWAYYNELEESTTPEIQR 839
Score = 39 (18.8 bits), Expect = 6.3e-19, Sum P(3) = 6.3e-19
Identities = 9/23 (39%), Positives = 12/23 (52%)
Query: 174 FNRQPEWVIYHELVQ-TTKEYMR 195
F +W Y+EL + TT E R
Sbjct: 817 FRLYTKWAYYNELEESTTPEIQR 839
>ZFIN|ZDB-GENE-040426-1144 [details] [associations]
symbol:dhx38 "DEAH (Asp-Glu-Ala-His) box
polypeptide 38" species:7955 "Danio rerio" [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 ZFIN:ZDB-GENE-040426-1144 GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026 HOGENOM:HOG000175261
HOVERGEN:HBG039428 KO:K12815 CTD:9785 OrthoDB:EOG4Z62MS
EMBL:BC063744 IPI:IPI00493120 RefSeq:NP_957170.1 UniGene:Dr.38854
ProteinModelPortal:Q6P404 STRING:Q6P404 PRIDE:Q6P404 GeneID:393850
KEGG:dre:393850 NextBio:20814835 ArrayExpress:Q6P404 Bgee:Q6P404
Uniprot:Q6P404
Length = 1258
Score = 472 (171.2 bits), Expect = 1.3e-43, P = 1.3e-43
Identities = 96/253 (37%), Positives = 152/253 (60%)
Query: 6 VTPISQ-MAEFPLEPNLSKMLIMSVHLQCSDEVLTIVSMLSVQNVFYRPXXXXXXXXXXX 64
+TP + M EFPL+P LSKMLI+S + CS ++L IVSMLSV ++FYRP
Sbjct: 970 LTPTGRLMVEFPLDPALSKMLIVSCDMSCSADILIIVSMLSVPSIFYRPKGREEESDQVR 1029
Query: 65 XXFNQMEGDHITLLAVYNSWRNNKFSNAWCYENFVQIRTLKRAQDVRKQLLGIMDRHKLD 124
F+ E DH+T L VY W+NN +S+ WC ++F+ + +++ ++VR QL IM + K++
Sbjct: 1030 EKFSVPESDHLTYLNVYLQWKNNNYSSIWCNDHFIHTKAMRKVREVRAQLKDIMVQQKMN 1089
Query: 125 VVSAGKNTVRVQKAVCSGFFRNAAKKDPQEGYRTLVDSQVVYIHPSSALFNR--QPEWVI 182
++S G + ++K +C+ +F AAK Y + ++HP+SALF P+++I
Sbjct: 1090 LISCGSDWDVIRKCICAAYFHQAAKLKGIGEYVNVRTGMPCHLHPTSALFGMGYTPDYII 1149
Query: 183 YHELVQTTKEYMREVTSIDPKWLVEFAPAFFKFSDPTKLSKFKKNQRLEPLQRTNRISFP 242
YHELV TTKEYM+ VT++D +WL E P F+ K S+ ++N+R + TN +
Sbjct: 1150 YHELVMTTKEYMQCVTAVDGEWLAELGPMFYSIKHAGK-SR-QENRRRAKEEITN-MEEE 1206
Query: 243 PGLLKQAVKKRPE 255
L ++ ++ R E
Sbjct: 1207 MSLAQEQIRARKE 1219
Score = 255 (94.8 bits), Expect = 6.5e-38, Sum P(2) = 6.5e-38
Identities = 47/98 (47%), Positives = 73/98 (74%)
Query: 244 GLLKQAVKKRPEIKLIVTSATLDAVKFSSYFFEAPIFTIPGRTFPVEVLYTKEPETDYLD 303
GLL++ V +R ++KLIVTSAT+D+ KF+S+F PIF IPGRTFPV++L++K P+ DY++
Sbjct: 697 GLLREVVSRRSDLKLIVTSATMDSDKFASFFGNVPIFHIPGRTFPVDILFSKTPQEDYVE 756
Query: 304 ASLITVMQIHLREPPGDVLLFLTGKLDVRKQLLGIMDR 341
A++ +QIHL GD+L+F+ G+ D+ I++R
Sbjct: 757 AAVKQALQIHLSGMVGDILIFMPGQEDIEVTSDQIVER 794
Score = 238 (88.8 bits), Expect = 6.5e-38, Sum P(2) = 6.5e-38
Identities = 54/159 (33%), Positives = 89/159 (55%)
Query: 330 DVRKQLLGIMDRHKLDVVSAGKNTVRVQKAVCSGFFRNAAKKDPQEGYRTLVDSQVVYIH 389
+VR QL IM + K++++S G + ++K +C+ +F AAK Y + ++H
Sbjct: 1074 EVRAQLKDIMVQQKMNLISCGSDWDVIRKCICAAYFHQAAKLKGIGEYVNVRTGMPCHLH 1133
Query: 390 PSSALFNR--QPEWVIYHELVQTTKEYMREVTSIDPKWLVEFAPAFFKFSDPTKLSKFKK 447
P+SALF P+++IYHELV TTKEYM+ VT++D +WL E P F+ K + +
Sbjct: 1134 PTSALFGMGYTPDYIIYHELVMTTKEYMQCVTAVDGEWLAELGPMFYSIKHAGKSRQENR 1193
Query: 448 NQRLEPLYNKYEEPNAWRISREEIDTACEILYERMKSLG 486
+ E + N EE + +++E+I E +R +LG
Sbjct: 1194 RRAKEEITNMEEEMS---LAQEQIRARKEE-QDRKNNLG 1228
Score = 203 (76.5 bits), Expect = 3.0e-34, Sum P(2) = 3.0e-34
Identities = 38/74 (51%), Positives = 55/74 (74%)
Query: 468 REEIDTACEILYERMKSLGPDVPELIILPVYSALPSEMQTRIFEAAPPGSRKVVIATNIA 527
+E+I+ + + ER+ L + P L +LP+YS LPS++Q +IF+ AP G RK ++ATNIA
Sbjct: 781 QEDIEVTSDQIVERLADL-ENAPALAVLPIYSQLPSDLQAKIFQKAPDGVRKCIVATNIA 839
Query: 528 ETSLTIDGIFYVVD 541
ETSLT+DGI +VVD
Sbjct: 840 ETSLTVDGIMFVVD 853
Score = 37 (18.1 bits), Expect = 5.2e-15, Sum P(2) = 5.2e-15
Identities = 9/21 (42%), Positives = 10/21 (47%)
Query: 150 KDPQEGYRTLVDSQVVYIHPS 170
K PQE Y Q + IH S
Sbjct: 748 KTPQEDYVEAAVKQALQIHLS 768
Score = 37 (18.1 bits), Expect = 3.5e-11, Sum P(2) = 3.5e-11
Identities = 9/21 (42%), Positives = 10/21 (47%)
Query: 371 KDPQEGYRTLVDSQVVYIHPS 391
K PQE Y Q + IH S
Sbjct: 748 KTPQEDYVEAAVKQALQIHLS 768
>ASPGD|ASPL0000014477 [details] [associations]
symbol:AN4032 species:162425 "Emericella nidulans"
[GO:0008150 "biological_process" evidence=ND] [GO:0005634 "nucleus"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR003593 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408
PROSITE:PS00690 PROSITE:PS51194 SMART:SM00382 SMART:SM00490
SMART:SM00847 GO:GO:0005524 GO:GO:0003676 EMBL:BN001302
EMBL:AACD01000065 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
HOGENOM:HOG000175261 KO:K12815 OMA:PSRSTWE OrthoDB:EOG4GQTD2
RefSeq:XP_661636.1 EnsemblFungi:CADANIAT00004650 GeneID:2873454
KEGG:ani:AN4032.2 Uniprot:Q5B5Z8
Length = 924
Score = 452 (164.2 bits), Expect = 1.7e-43, Sum P(2) = 1.7e-43
Identities = 89/210 (42%), Positives = 130/210 (61%)
Query: 11 QMAEFPLEPNLSKMLIMSVHLQ-CSDEVLTIVSMLSVQNVFYRPXXXXXXXXXXXXXFNQ 69
QM FP++P L+K++I + CS+E+LTIVSMLSV NVFYRP F
Sbjct: 601 QMTPFPMDPPLAKLIITAAEQYGCSEEMLTIVSMLSVPNVFYRPKERQEESDAAREKFFV 660
Query: 70 MEGDHITLLAVYNSWRNNKFSNAWCYENFVQIRTLKRAQDVRKQLLGIMDRHKLDVVSAG 129
E DH+TLL VY W++N +S+ WC ++F+ +TL+RA++VR QL IM KL ++S G
Sbjct: 661 PESDHLTLLHVYTQWKSNGYSDHWCTKHFLHAKTLRRAKEVRDQLNDIMVMQKLPLISCG 720
Query: 130 KNTVRVQKAVCSGFFRNAAKKDPQEGYRTLVDSQVVYIHPSSALFNRQ--PEWVIYHELV 187
+ ++K +CSGF+ AA+ + L S + +HP+SAL+ PE+V+YHEL+
Sbjct: 721 TDWDEIRKCICSGFYHQAARVKGIGEFINLRTSVSMALHPTSALYGLGYVPEYVVYHELI 780
Query: 188 QTTKEYMREVTSIDPKWLVEFAPAFFKFSD 217
T+KEYM VT++DP WL E F+ +
Sbjct: 781 LTSKEYMSTVTAVDPHWLAELGGVFYSVKE 810
Score = 242 (90.2 bits), Expect = 4.6e-35, Sum P(2) = 4.6e-35
Identities = 47/101 (46%), Positives = 74/101 (73%)
Query: 244 GLLKQAVKKRPEIKLIVTSATLDAVKFSSYFFEAPIFTIPGRTFPVEVLYTKEPETDYLD 303
GLLK+ + +R ++KLIVTSAT++A +FS +F AP F IPGRTFPV+V +++ P DY+D
Sbjct: 322 GLLKKILARRRDLKLIVTSATMNAERFSRFFGGAPEFIIPGRTFPVDVHFSRTPCEDYVD 381
Query: 304 ASLITVMQIHLREPPGDVLLFLTGKLDVRKQLLGIMDRHKL 344
+++ V+ IH+ + PGD+L+F+TG+ D+ + +R KL
Sbjct: 382 SAVKQVLAIHVSQGPGDILVFMTGQEDIEATCELVDERLKL 422
Score = 232 (86.7 bits), Expect = 2.4e-15, Sum P(2) = 2.4e-15
Identities = 44/74 (59%), Positives = 59/74 (79%)
Query: 468 REEIDTACEILYERMKSLGPDVPELIILPVYSALPSEMQTRIFEAAPPGSRKVVIATNIA 527
+E+I+ CE++ ER+K L D P+L ILP+YS +P+E Q +IFE A PG RKV++ATNIA
Sbjct: 406 QEDIEATCELVDERLKLLN-DPPKLSILPIYSQMPAEQQAKIFERAAPGVRKVIVATNIA 464
Query: 528 ETSLTIDGIFYVVD 541
ETSLT+DGI +VVD
Sbjct: 465 ETSLTVDGIMFVVD 478
Score = 221 (82.9 bits), Expect = 4.6e-35, Sum P(2) = 4.6e-35
Identities = 53/157 (33%), Positives = 86/157 (54%)
Query: 330 DVRKQLLGIMDRHKLDVVSAGKNTVRVQKAVCSGFFRNAAKKDPQEGYRTLVDSQVVYIH 389
+VR QL IM KL ++S G + ++K +CSGF+ AA+ + L S + +H
Sbjct: 700 EVRDQLNDIMVMQKLPLISCGTDWDEIRKCICSGFYHQAARVKGIGEFINLRTSVSMALH 759
Query: 390 PSSALFNRQ--PEWVIYHELVQTTKEYMREVTSIDPKWLVEFAPAFFKFSDPTKLSKFKK 447
P+SAL+ PE+V+YHEL+ T+KEYM VT++DP WL E F+ + K ++
Sbjct: 760 PTSALYGLGYVPEYVVYHELILTSKEYMSTVTAVDPHWLAELGGVFYSVKE--KGYSHRE 817
Query: 448 NQRLEPLYNKYEEPNAWRISREEIDTACEILYERMKS 484
+ E +N+ E + +I+ + A E E+ K+
Sbjct: 818 RRVTEQEFNRRMEIES-QIAADRERAAAEKRREKEKT 853
Score = 43 (20.2 bits), Expect = 2.4e-15, Sum P(2) = 2.4e-15
Identities = 20/61 (32%), Positives = 28/61 (45%)
Query: 298 ETDYLDASLITVMQIHLREPPGDVLLFLTGKLDVRKQLLGIMDRHKLDVVSAGKNTVRVQ 357
+TD S I + + H R DVL+ L K+ R++ L KL V SA N R
Sbjct: 296 QTDLDKYSCIIMDEAHERALNTDVLMGLLKKILARRRDL------KLIVTSATMNAERFS 349
Query: 358 K 358
+
Sbjct: 350 R 350
Score = 42 (19.8 bits), Expect = 1.7e-43, Sum P(2) = 1.7e-43
Identities = 8/11 (72%), Positives = 10/11 (90%)
Query: 1 MDSLVVTPISQ 11
MD+L +TPISQ
Sbjct: 493 MDTLQITPISQ 503
>FB|FBgn0026713 [details] [associations]
symbol:l(1)G0007 "lethal (1) G0007" species:7227 "Drosophila
melanogaster" [GO:0008026 "ATP-dependent helicase activity"
evidence=ISS] [GO:0004004 "ATP-dependent RNA helicase activity"
evidence=ISS] [GO:0000398 "mRNA splicing, via spliceosome"
evidence=ISS] [GO:0005681 "spliceosomal complex" evidence=ISS]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0000381 "regulation of alternative mRNA
splicing, via spliceosome" evidence=IMP] [GO:0002121 "inter-male
aggressive behavior" evidence=IMP] [GO:0007476 "imaginal
disc-derived wing morphogenesis" evidence=IMP] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
EMBL:AE014298 GO:GO:0005681 GO:GO:0003676 GO:GO:0002121
GO:GO:0007476 GO:GO:0000398 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717 GO:GO:0004004
GO:GO:0000381 KO:K12815 GeneTree:ENSGT00700000104877 OMA:PSRSTWE
UniGene:Dm.4249 GeneID:32373 KEGG:dme:Dmel_CG32604
FlyBase:FBgn0026713 ChiTaRS:l(1)G0007 GenomeRNAi:32373
NextBio:778160 EMBL:AY058553 RefSeq:NP_572947.1 SMR:Q9VY54
MINT:MINT-334469 STRING:Q9VY54 EnsemblMetazoa:FBtr0073900
UCSC:CG32604-RA InParanoid:Q9VY54 Uniprot:Q9VY54
Length = 1222
Score = 470 (170.5 bits), Expect = 2.0e-43, P = 2.0e-43
Identities = 92/226 (40%), Positives = 134/226 (59%)
Query: 11 QMAEFPLEPNLSKMLIMSVHLQCSDEVLTIVSMLSVQNVFYRPXXXXXXXXXXXXXFNQM 70
QMAEFPL+P +MLI++ + CS EVL IVSMLSV ++FYRP F +
Sbjct: 947 QMAEFPLDPPQCQMLIVACRMGCSAEVLIIVSMLSVPSIFYRPKGREDEADGVREKFQRP 1006
Query: 71 EGDHITLLAVYNSWRNNKFSNAWCYENFVQIRTLKRAQDVRKQLLGIMDRHKLDVVSAGK 130
E DH+T L VY WR N +S+ WC E+F+ I+ +++ ++VR+QL IM + L V+S G
Sbjct: 1007 ESDHLTYLNVYQQWRQNNYSSTWCNEHFIHIKAMRKVREVRQQLKDIMTQQNLSVISCGI 1066
Query: 131 NTVRVQKAVCSGFFRNAAKKDPQEGYRTLVDSQVVYIHPSSALFN--RQPEWVIYHELVQ 188
+ V+K +CS +F AA+ Y L ++HP+SAL+ P++V+YHEL+
Sbjct: 1067 DWDIVRKCICSAYFYQAARLKGIGEYVNLRTGMPCHLHPTSALYGLGTTPDYVVYHELIM 1126
Query: 189 TTKEYMREVTSIDPKWLVEFAPAFFKFSDPTKLSKFKKNQRLEPLQ 234
T KEYM+ T++D WL E P FF + + + KK Q E L+
Sbjct: 1127 TAKEYMQCATAVDGYWLAELGPMFFSVKESGRSGREKKKQAAEHLK 1172
Score = 233 (87.1 bits), Expect = 1.5e-34, Sum P(2) = 1.5e-34
Identities = 41/88 (46%), Positives = 67/88 (76%)
Query: 244 GLLKQAVKKRPEIKLIVTSATLDAVKFSSYFFEAPIFTIPGRTFPVEVLYTKEPETDYLD 303
GLL++ V +R ++KLIVTSAT+D+ KF+++F P FTIPGRTFPV+V+++K DY++
Sbjct: 668 GLLREIVARRHDLKLIVTSATMDSSKFATFFGNVPTFTIPGRTFPVDVMFSKNTCEDYVE 727
Query: 304 ASLITVMQIHLREPPGDVLLFLTGKLDV 331
+++ +Q+HL GD+L+F+ G+ D+
Sbjct: 728 SAVKQALQVHLTPNEGDMLIFMPGQEDI 755
Score = 229 (85.7 bits), Expect = 1.5e-34, Sum P(2) = 1.5e-34
Identities = 49/133 (36%), Positives = 73/133 (54%)
Query: 330 DVRKQLLGIMDRHKLDVVSAGKNTVRVQKAVCSGFFRNAAKKDPQEGYRTLVDSQVVYIH 389
+VR+QL IM + L V+S G + V+K +CS +F AA+ Y L ++H
Sbjct: 1045 EVRQQLKDIMTQQNLSVISCGIDWDIVRKCICSAYFYQAARLKGIGEYVNLRTGMPCHLH 1104
Query: 390 PSSALFN--RQPEWVIYHELVQTTKEYMREVTSIDPKWLVEFAPAFFKFSDPTKLSKFKK 447
P+SAL+ P++V+YHEL+ T KEYM+ T++D WL E P FF + + + KK
Sbjct: 1105 PTSALYGLGTTPDYVVYHELIMTAKEYMQCATAVDGYWLAELGPMFFSVKESGRSGREKK 1164
Query: 448 NQRLEPLYNKYEE 460
Q E L E+
Sbjct: 1165 KQAAEHLKEMEEQ 1177
Score = 214 (80.4 bits), Expect = 5.7e-33, Sum P(2) = 5.7e-33
Identities = 40/74 (54%), Positives = 56/74 (75%)
Query: 468 REEIDTACEILYERMKSLGPDVPELIILPVYSALPSEMQTRIFEAAPPGSRKVVIATNIA 527
+E+I+ CE+L ER+ + + P L ILP+YS LPS++Q +IF+ + G RK V+ATNIA
Sbjct: 752 QEDIEVTCEVLEERLAEID-NAPALSILPIYSQLPSDLQAKIFQKSSDGLRKCVVATNIA 810
Query: 528 ETSLTIDGIFYVVD 541
ETSLT+DGI YV+D
Sbjct: 811 ETSLTVDGIIYVID 824
Score = 37 (18.1 bits), Expect = 4.7e-14, Sum P(2) = 4.7e-14
Identities = 12/35 (34%), Positives = 17/35 (48%)
Query: 286 TFPVEVLYTKEPETDYLDASL--ITVMQIHLREPP 318
T P E+ T T L SL + ++Q H +PP
Sbjct: 884 TVP-EIQRTNLANTVLLLKSLGVVDLLQFHFMDPP 917
>WB|WBGene00018967 [details] [associations]
symbol:F56D2.6 species:6239 "Caenorhabditis elegans"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0040010 "positive regulation of growth rate"
evidence=IMP] [GO:0009792 "embryo development ending in birth or
egg hatching" evidence=IMP] [GO:0040011 "locomotion" evidence=IMP]
[GO:0040007 "growth" evidence=IMP] [GO:0002119 "nematode larval
development" evidence=IMP] [GO:0000003 "reproduction" evidence=IMP]
[GO:0016246 "RNA interference" evidence=IMP] [GO:0006898
"receptor-mediated endocytosis" evidence=IMP] [GO:0002009
"morphogenesis of an epithelium" evidence=IMP] [GO:0040035
"hermaphrodite genitalia development" evidence=IMP] [GO:0042127
"regulation of cell proliferation" evidence=IMP] [GO:0040020
"regulation of meiosis" evidence=IMP] [GO:0040022 "feminization of
hermaphroditic germ-line" evidence=IMP] [GO:0007281 "germ cell
development" evidence=IMP] InterPro:IPR001650 InterPro:IPR003593
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00382
SMART:SM00490 SMART:SM00847 GO:GO:0005739 GO:GO:0005524
GO:GO:0005634 GO:GO:0009792 GO:GO:0002009 GO:GO:0006898
GO:GO:0040007 GO:GO:0040010 GO:GO:0002119 GO:GO:0016246
GO:GO:0008380 GO:GO:0006397 GO:GO:0040011 GO:GO:0003676
GO:GO:0042127 GO:GO:0040035 GO:GO:0007281 GO:GO:0040020
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0030686
GO:GO:0006364 eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
GO:GO:0004004 GO:GO:0040022 HOGENOM:HOG000175261 EMBL:FO080358
KO:K12820 PIR:T16482 RefSeq:NP_741147.1 ProteinModelPortal:Q20875
SMR:Q20875 STRING:Q20875 PaxDb:Q20875 PRIDE:Q20875
EnsemblMetazoa:F56D2.6a.1 EnsemblMetazoa:F56D2.6a.2 GeneID:175771
KEGG:cel:CELE_F56D2.6 UCSC:F56D2.6a CTD:175771 WormBase:F56D2.6a
GeneTree:ENSGT00650000093246 InParanoid:Q20875 OMA:TVLQIHA
NextBio:889592 ArrayExpress:Q20875 Uniprot:Q20875
Length = 739
Score = 460 (167.0 bits), Expect = 4.6e-43, P = 4.6e-43
Identities = 93/231 (40%), Positives = 141/231 (61%)
Query: 10 SQMAEFPLEPNLSKMLIMSVHLQCSDEVLTIVSMLSVQNVFYRPXXXXXXXXXXXXXFNQ 69
S MAEFPL+P L+KMLI S L CS+E+L+I +MLSV + RP F
Sbjct: 504 SLMAEFPLDPQLAKMLITSTELNCSNEILSITAMLSVPQCWVRPNEMRTEADEAKARFAH 563
Query: 70 MEGDHITLLAVYNSWRNNKFSNAWCYENFVQIRTLKRAQDVRKQLLGIMDRHKLDVVSAG 129
++GDH+TLL VY+S++ N+ WCY+NF+ RT+K A VR QL +MD++ L VS
Sbjct: 564 IDGDHLTLLNVYHSFKQNQEDPQWCYDNFINYRTMKTADTVRTQLSRVMDKYNLRRVSTD 623
Query: 130 KNT----VRVQKAVCSGFFRNAAKKDPQEGYRTLVDSQVVYIHPSSALFNRQPEWVIYHE 185
+ + ++KA+ +GFF A + Y T+ D+Q+V +HPS+ L + +PEW +Y+E
Sbjct: 624 FKSRDYYLNIRKALVAGFFMQVAHLERSGHYVTVKDNQLVNLHPSTVL-DHKPEWALYNE 682
Query: 186 LVQTTKEYMREVTSIDPKWLVEFAPAFFKFSD-PTKLSKFKKNQRLEPLQR 235
V TTK ++R VT + P+WL++ AP ++ + P +K K ++ LQR
Sbjct: 683 FVLTTKNFIRTVTDVRPEWLLQIAPQYYDLDNFPDGDTKRKLTTVMQTLQR 733
Score = 261 (96.9 bits), Expect = 5.8e-36, Sum P(2) = 5.8e-36
Identities = 52/114 (45%), Positives = 77/114 (67%)
Query: 221 LSKFKKNQRLEPLQRTNRISFPPGLLKQAVKKRPEIKLIVTSATLDAVKFSSYFFEAPIF 280
L K+K E +RT GL+K+ V+ R +IK+++ SATLDA KF YF + P+
Sbjct: 195 LDKYKVLILDEAHERTLATDILMGLIKEIVRNRADIKVVIMSATLDAGKFQRYFEDCPLL 254
Query: 281 TIPGRTFPVEVLYTKEPETDYLDASLITVMQIHL-REPPGDVLLFLTGKLDVRK 333
++PGRTFPVE+ +T E DYL+A++ TV+QIH+ E GD+LLFLTG+ ++ +
Sbjct: 255 SVPGRTFPVEIFFTPNAEKDYLEAAIRTVIQIHMVEEVEGDILLFLTGQEEIEE 308
Score = 206 (77.6 bits), Expect = 5.8e-36, Sum P(2) = 5.8e-36
Identities = 41/108 (37%), Positives = 68/108 (62%)
Query: 331 VRKQLLGIMDRHKLDVVSAGKNT----VRVQKAVCSGFFRNAAKKDPQEGYRTLVDSQVV 386
VR QL +MD++ L VS + + ++KA+ +GFF A + Y T+ D+Q+V
Sbjct: 604 VRTQLSRVMDKYNLRRVSTDFKSRDYYLNIRKALVAGFFMQVAHLERSGHYVTVKDNQLV 663
Query: 387 YIHPSSALFNRQPEWVIYHELVQTTKEYMREVTSIDPKWLVEFAPAFF 434
+HPS+ L + +PEW +Y+E V TTK ++R VT + P+WL++ AP ++
Sbjct: 664 NLHPSTVL-DHKPEWALYNEFVLTTKNFIRTVTDVRPEWLLQIAPQYY 710
Score = 198 (74.8 bits), Expect = 4.0e-35, Sum P(2) = 4.0e-35
Identities = 42/81 (51%), Positives = 55/81 (67%)
Query: 468 REEIDTACEILYERMKSLGPDVPELIILPVYSALPSEMQTRIFEAAPPG------SRKVV 521
+EEI+ AC+ + +++LG D L +P+YS LP Q RIFE APP SRK V
Sbjct: 303 QEEIEEACKRIDREIQALGADAGALSCIPLYSTLPPAAQQRIFEPAPPNRPNGAISRKCV 362
Query: 522 IATNIAETSLTIDGIFYVVDP 542
I+TNIAETSLTIDG+ +V+DP
Sbjct: 363 ISTNIAETSLTIDGVVFVIDP 383
>UNIPROTKB|Q20875 [details] [associations]
symbol:F56D2.6 "Putative pre-mRNA-splicing factor
ATP-dependent RNA helicase F56D2.6" species:6239 "Caenorhabditis
elegans" [GO:0030686 "90S preribosome" evidence=ISS] [GO:0004004
"ATP-dependent RNA helicase activity" evidence=ISS] [GO:0005739
"mitochondrion" evidence=ISS] [GO:0006364 "rRNA processing"
evidence=ISS] InterPro:IPR001650 InterPro:IPR003593
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00382
SMART:SM00490 SMART:SM00847 GO:GO:0005739 GO:GO:0005524
GO:GO:0005634 GO:GO:0009792 GO:GO:0002009 GO:GO:0006898
GO:GO:0040007 GO:GO:0040010 GO:GO:0002119 GO:GO:0016246
GO:GO:0008380 GO:GO:0006397 GO:GO:0040011 GO:GO:0003676
GO:GO:0042127 GO:GO:0040035 GO:GO:0007281 GO:GO:0040020
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0030686
GO:GO:0006364 eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
GO:GO:0004004 GO:GO:0040022 HOGENOM:HOG000175261 EMBL:FO080358
KO:K12820 PIR:T16482 RefSeq:NP_741147.1 ProteinModelPortal:Q20875
SMR:Q20875 STRING:Q20875 PaxDb:Q20875 PRIDE:Q20875
EnsemblMetazoa:F56D2.6a.1 EnsemblMetazoa:F56D2.6a.2 GeneID:175771
KEGG:cel:CELE_F56D2.6 UCSC:F56D2.6a CTD:175771 WormBase:F56D2.6a
GeneTree:ENSGT00650000093246 InParanoid:Q20875 OMA:TVLQIHA
NextBio:889592 ArrayExpress:Q20875 Uniprot:Q20875
Length = 739
Score = 460 (167.0 bits), Expect = 4.6e-43, P = 4.6e-43
Identities = 93/231 (40%), Positives = 141/231 (61%)
Query: 10 SQMAEFPLEPNLSKMLIMSVHLQCSDEVLTIVSMLSVQNVFYRPXXXXXXXXXXXXXFNQ 69
S MAEFPL+P L+KMLI S L CS+E+L+I +MLSV + RP F
Sbjct: 504 SLMAEFPLDPQLAKMLITSTELNCSNEILSITAMLSVPQCWVRPNEMRTEADEAKARFAH 563
Query: 70 MEGDHITLLAVYNSWRNNKFSNAWCYENFVQIRTLKRAQDVRKQLLGIMDRHKLDVVSAG 129
++GDH+TLL VY+S++ N+ WCY+NF+ RT+K A VR QL +MD++ L VS
Sbjct: 564 IDGDHLTLLNVYHSFKQNQEDPQWCYDNFINYRTMKTADTVRTQLSRVMDKYNLRRVSTD 623
Query: 130 KNT----VRVQKAVCSGFFRNAAKKDPQEGYRTLVDSQVVYIHPSSALFNRQPEWVIYHE 185
+ + ++KA+ +GFF A + Y T+ D+Q+V +HPS+ L + +PEW +Y+E
Sbjct: 624 FKSRDYYLNIRKALVAGFFMQVAHLERSGHYVTVKDNQLVNLHPSTVL-DHKPEWALYNE 682
Query: 186 LVQTTKEYMREVTSIDPKWLVEFAPAFFKFSD-PTKLSKFKKNQRLEPLQR 235
V TTK ++R VT + P+WL++ AP ++ + P +K K ++ LQR
Sbjct: 683 FVLTTKNFIRTVTDVRPEWLLQIAPQYYDLDNFPDGDTKRKLTTVMQTLQR 733
Score = 261 (96.9 bits), Expect = 5.8e-36, Sum P(2) = 5.8e-36
Identities = 52/114 (45%), Positives = 77/114 (67%)
Query: 221 LSKFKKNQRLEPLQRTNRISFPPGLLKQAVKKRPEIKLIVTSATLDAVKFSSYFFEAPIF 280
L K+K E +RT GL+K+ V+ R +IK+++ SATLDA KF YF + P+
Sbjct: 195 LDKYKVLILDEAHERTLATDILMGLIKEIVRNRADIKVVIMSATLDAGKFQRYFEDCPLL 254
Query: 281 TIPGRTFPVEVLYTKEPETDYLDASLITVMQIHL-REPPGDVLLFLTGKLDVRK 333
++PGRTFPVE+ +T E DYL+A++ TV+QIH+ E GD+LLFLTG+ ++ +
Sbjct: 255 SVPGRTFPVEIFFTPNAEKDYLEAAIRTVIQIHMVEEVEGDILLFLTGQEEIEE 308
Score = 206 (77.6 bits), Expect = 5.8e-36, Sum P(2) = 5.8e-36
Identities = 41/108 (37%), Positives = 68/108 (62%)
Query: 331 VRKQLLGIMDRHKLDVVSAGKNT----VRVQKAVCSGFFRNAAKKDPQEGYRTLVDSQVV 386
VR QL +MD++ L VS + + ++KA+ +GFF A + Y T+ D+Q+V
Sbjct: 604 VRTQLSRVMDKYNLRRVSTDFKSRDYYLNIRKALVAGFFMQVAHLERSGHYVTVKDNQLV 663
Query: 387 YIHPSSALFNRQPEWVIYHELVQTTKEYMREVTSIDPKWLVEFAPAFF 434
+HPS+ L + +PEW +Y+E V TTK ++R VT + P+WL++ AP ++
Sbjct: 664 NLHPSTVL-DHKPEWALYNEFVLTTKNFIRTVTDVRPEWLLQIAPQYY 710
Score = 198 (74.8 bits), Expect = 4.0e-35, Sum P(2) = 4.0e-35
Identities = 42/81 (51%), Positives = 55/81 (67%)
Query: 468 REEIDTACEILYERMKSLGPDVPELIILPVYSALPSEMQTRIFEAAPPG------SRKVV 521
+EEI+ AC+ + +++LG D L +P+YS LP Q RIFE APP SRK V
Sbjct: 303 QEEIEEACKRIDREIQALGADAGALSCIPLYSTLPPAAQQRIFEPAPPNRPNGAISRKCV 362
Query: 522 IATNIAETSLTIDGIFYVVDP 542
I+TNIAETSLTIDG+ +V+DP
Sbjct: 363 ISTNIAETSLTIDGVVFVIDP 383
>DICTYBASE|DDB_G0285213 [details] [associations]
symbol:dhx15 "putative RNA splicing factor"
species:44689 "Dictyostelium discoideum" [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0006397 "mRNA
processing" evidence=IEA;ISS] [GO:0005681 "spliceosomal complex"
evidence=ISS] [GO:0004004 "ATP-dependent RNA helicase activity"
evidence=ISS] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0008380 "RNA splicing" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] InterPro:IPR001650 InterPro:IPR003593
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00382
SMART:SM00490 SMART:SM00847 dictyBase:DDB_G0285213 GO:GO:0005524
GenomeReviews:CM000153_GR GO:GO:0008380 GO:GO:0006397 GO:GO:0005681
GO:GO:0003676 EMBL:AAFI02000076 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
GO:GO:0004004 KO:K12820 OMA:TVLQIHA RefSeq:XP_638323.1
ProteinModelPortal:Q54NJ4 EnsemblProtists:DDB0233403 GeneID:8624993
KEGG:ddi:DDB_G0285213 Uniprot:Q54NJ4
Length = 727
Score = 455 (165.2 bits), Expect = 1.5e-42, P = 1.5e-42
Identities = 96/227 (42%), Positives = 137/227 (60%)
Query: 10 SQMAEFPLEPNLSKMLIMSVHLQCSDEVLTIVSMLSVQNVFYRPXXXXXXXXXXXXXFNQ 69
S M+EFPL+P LSKMLI+S CS+E+LTI +MLS N F RP F+
Sbjct: 487 SIMSEFPLDPQLSKMLIVSAERSCSNEILTIAAMLSAPNCFMRPKDNRIEADSAKKSFDH 546
Query: 70 MEGDHITLLAVYNSWRNNKFSNAWCYENFVQIRTLKRAQDVRKQLLGIMDRHKLDVVSAG 129
+GDH+T+L VY+S++ N WCY+NF+ R +K+A VR QL I+ R KL +VS
Sbjct: 547 FDGDHLTMLNVYHSFKKNGEDPTWCYDNFLNHRAIKQADSVRSQLARILTRFKLPLVSGD 606
Query: 130 KNTV----RVQKAVCSGFFRNAAKKDPQEGYRTLVDSQVVYIHPSSALFNRQPEWVIYHE 185
N+ ++K + +GFF AK + + Y TL D Q V HPS+ L R+PE+ IY+E
Sbjct: 607 VNSKFYYENIKKCIAAGFFMQVAKCEKKNIYFTLGDEQSVIFHPSTGL-TRRPEFCIYNE 665
Query: 186 LVQTTKEYMREVTSIDPKWLVEFAPAFFKF-SDPTKLSK-FKKNQRL 230
V T++ Y+R +T + WL+E AP++FK S P K + ++ QRL
Sbjct: 666 FVLTSENYIRTITDVKFDWLLELAPSYFKQKSFPKKTKETIQRAQRL 712
Score = 252 (93.8 bits), Expect = 4.0e-36, Sum P(2) = 4.0e-36
Identities = 53/116 (45%), Positives = 76/116 (65%)
Query: 216 SDPTKLSKFKKNQRLEPLQRTNRISFPPGLLKQAVKKRPEIKLIVTSATLDAVKFSSYFF 275
SDPT L+K+ E +RT GL+K +K+R ++KLIV SATL+A KF YF
Sbjct: 185 SDPT-LNKYDVIILDEAHERTLSTDILFGLIKDILKRRKDLKLIVMSATLEAGKFQKYFE 243
Query: 276 EAPIFTIPGRTFPVEVLYTKEPETDYLDASLITVMQIHLREPPGDVLLFLTGKLDV 331
AP+ +PGR PVE+ YT+E DYL++++ TV+ IH E GD+L+FLTG+ ++
Sbjct: 244 NAPLIKVPGRLHPVEIFYTEEAAKDYLESAVRTVIDIHTNEGTGDILVFLTGEEEI 299
Score = 217 (81.4 bits), Expect = 4.0e-36, Sum P(2) = 4.0e-36
Identities = 51/130 (39%), Positives = 76/130 (58%)
Query: 331 VRKQLLGIMDRHKLDVVSAGKNTV----RVQKAVCSGFFRNAAKKDPQEGYRTLVDSQVV 386
VR QL I+ R KL +VS N+ ++K + +GFF AK + + Y TL D Q V
Sbjct: 587 VRSQLARILTRFKLPLVSGDVNSKFYYENIKKCIAAGFFMQVAKCEKKNIYFTLGDEQSV 646
Query: 387 YIHPSSALFNRQPEWVIYHELVQTTKEYMREVTSIDPKWLVEFAPAFFKFSDPTKLSKFK 446
HPS+ L R+PE+ IY+E V T++ Y+R +T + WL+E AP++FK K +K +
Sbjct: 647 IFHPSTGL-TRRPEFCIYNEFVLTSENYIRTITDVKFDWLLELAPSYFKQKSFPKKTK-E 704
Query: 447 KNQRLEPLYN 456
QR + LY+
Sbjct: 705 TIQRAQRLYS 714
Score = 160 (61.4 bits), Expect = 3.8e-30, Sum P(2) = 3.8e-30
Identities = 34/74 (45%), Positives = 48/74 (64%)
Query: 469 EEIDTACEILYERMKSLGPDVPELIILPVYSALPSEMQTRIFEAAPPGSRKVVIATNIAE 528
EEI+ C + + G +P + LP+YS+LP Q++IF+ RK +++TNIAE
Sbjct: 297 EEIEDTCAKIQRETRERG--LPPMKTLPLYSSLPIYQQSKIFDTCK--ERKCIVSTNIAE 352
Query: 529 TSLTIDGIFYVVDP 542
TSLTIDGI +VVDP
Sbjct: 353 TSLTIDGIVFVVDP 366
>ZFIN|ZDB-GENE-030131-650 [details] [associations]
symbol:dhx15 "DEAH (Asp-Glu-Ala-His) box
polypeptide 15" species:7955 "Danio rerio" [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 ZFIN:ZDB-GENE-030131-650 GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 KO:K12820 GeneTree:ENSGT00650000093246
OMA:TVLQIHA CTD:1665 EMBL:CU651678 IPI:IPI00481686
RefSeq:NP_001108613.1 UniGene:Dr.4024 Ensembl:ENSDART00000081245
GeneID:321931 KEGG:dre:321931 NextBio:20807587 Uniprot:E7F3I8
Length = 769
Score = 456 (165.6 bits), Expect = 1.6e-42, P = 1.6e-42
Identities = 94/235 (40%), Positives = 141/235 (60%)
Query: 10 SQMAEFPLEPNLSKMLIMSVHLQCSDEVLTIVSMLSVQNVFYRPXXXXXXXXXXXXXFNQ 69
S MAEFPL+P L+KM+I S CS+EVL+I +MLSV F RP F
Sbjct: 534 SMMAEFPLDPQLAKMVIASCDFNCSNEVLSITAMLSVPQCFVRPTEAKKAADESKMRFAH 593
Query: 70 MEGDHITLLAVYNSWRNNKFSNAWCYENFVQIRTLKRAQDVRKQLLGIMDRHKLDVVSAG 129
++GDH+TLL VY++++ N S WCY+NF+ R+L A +VR+QL IMDR L S
Sbjct: 594 IDGDHLTLLNVYHAFKQNHESVQWCYDNFINYRSLMSADNVRQQLSRIMDRFNLPRRSTE 653
Query: 130 KNT----VRVQKAVCSGFFRNAAKKDPQEGYRTLVDSQVVYIHPSSALFNRQPEWVIYHE 185
+ + +++A+ +GFF A + Y T+ D+QVV +HPS+ L + +PEWV+Y+E
Sbjct: 654 FTSRDYYINIRRALVTGFFMQVAHLERTGHYLTVKDNQVVQLHPSTVL-DHKPEWVLYNE 712
Query: 186 LVQTTKEYMREVTSIDPKWLVEFAPAFFKFSDPTKLSKFKKNQRLEPLQRTNRIS 240
V TTK Y+R T I P+WLV+ AP +++ S+ + ++ +R+ +T S
Sbjct: 713 FVLTTKNYIRTCTDIKPEWLVKIAPQYYEMSNFPQCEAKRQLERIVAKLQTKEYS 767
Score = 272 (100.8 bits), Expect = 1.6e-38, Sum P(2) = 1.6e-38
Identities = 55/102 (53%), Positives = 73/102 (71%)
Query: 231 EPLQRTNRISFPPGLLKQAVKKRPEIKLIVTSATLDAVKFSSYFFEAPIFTIPGRTFPVE 290
E +RT G+LK+ V++R ++K+IV SATLDA KF YF P+ TIPGRT PVE
Sbjct: 235 EAHERTLATDILMGVLKEVVRQRSDLKVIVMSATLDAGKFQVYFDNCPLLTIPGRTHPVE 294
Query: 291 VLYTKEPETDYLDASLITVMQIHL-REPPGDVLLFLTGKLDV 331
+ YT EPE DYL+A++ TV+QIH+ E GDVLLFLTG+ ++
Sbjct: 295 IFYTPEPERDYLEAAIRTVIQIHMCEEDEGDVLLFLTGQEEI 336
Score = 219 (82.2 bits), Expect = 1.6e-38, Sum P(2) = 1.6e-38
Identities = 46/113 (40%), Positives = 71/113 (62%)
Query: 330 DVRKQLLGIMDRHKLDVVSAGKNT----VRVQKAVCSGFFRNAAKKDPQEGYRTLVDSQV 385
+VR+QL IMDR L S + + +++A+ +GFF A + Y T+ D+QV
Sbjct: 633 NVRQQLSRIMDRFNLPRRSTEFTSRDYYINIRRALVTGFFMQVAHLERTGHYLTVKDNQV 692
Query: 386 VYIHPSSALFNRQPEWVIYHELVQTTKEYMREVTSIDPKWLVEFAPAFFKFSD 438
V +HPS+ L + +PEWV+Y+E V TTK Y+R T I P+WLV+ AP +++ S+
Sbjct: 693 VQLHPSTVL-DHKPEWVLYNEFVLTTKNYIRTCTDIKPEWLVKIAPQYYEMSN 744
Score = 216 (81.1 bits), Expect = 3.3e-38, Sum P(2) = 3.3e-38
Identities = 44/81 (54%), Positives = 59/81 (72%)
Query: 468 REEIDTACEILYERMKSLGPDVPELIILPVYSALPSEMQTRIFEAAPP----GS--RKVV 521
+EEID AC+ + + LGPDV ++ I+P+YS LP + Q RIFE PP G+ RKVV
Sbjct: 333 QEEIDEACKRIKREIDDLGPDVGDIKIIPLYSTLPPQQQQRIFEPPPPRKPNGAIGRKVV 392
Query: 522 IATNIAETSLTIDGIFYVVDP 542
++TNIAETSLTIDG+ +V+DP
Sbjct: 393 VSTNIAETSLTIDGVVFVIDP 413
Score = 39 (18.8 bits), Expect = 9.8e-14, Sum P(2) = 9.8e-14
Identities = 7/33 (21%), Positives = 17/33 (51%)
Query: 15 FPLEPNLSKMLIMSVHLQCSDEVLTIVSMLSVQ 47
F ++P +K + + ++ ++T +S S Q
Sbjct: 409 FVIDPGFAKQKVYNPRIRVESLLVTAISKASAQ 441
>ZFIN|ZDB-GENE-070410-11 [details] [associations]
symbol:zgc:158828 "zgc:158828" species:7955 "Danio
rerio" [GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0005575 "cellular_component" evidence=ND]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0000166
"nucleotide binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 ZFIN:ZDB-GENE-070410-11
GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
HOGENOM:HOG000175261 HOVERGEN:HBG039428 OrthoDB:EOG4V9TQ5
EMBL:BC117646 IPI:IPI00851766 UniGene:Dr.86097 Uniprot:Q1ECW4
Length = 691
Score = 436 (158.5 bits), Expect = 1.7e-42, Sum P(2) = 1.7e-42
Identities = 84/213 (39%), Positives = 133/213 (62%)
Query: 11 QMAEFPLEPNLSKMLIMSVHLQCSDEVLTIVSMLSVQNVFYRPXXXXXXXXXXXXXFNQM 70
+MAEFPL P +KML+ S + CS E++TI +M+ +QN+F P F
Sbjct: 472 RMAEFPLSPMFAKMLLESGNFGCSKEIVTIAAMMQIQNIFVAPHNQRKSAAREHRKFAVA 531
Query: 71 EGDHITLLAVYNSWRNNKFSNAWCYENFVQIRTLKRAQDVRKQLLGIMDRHKLDVVSAGK 130
EGDH+T+L VY ++ ++ S+ WC ++F+ + L RA VR+QL ++++ K+ S+
Sbjct: 532 EGDHLTMLNVYEAFIKHQKSSQWCQDHFLNYKGLLRATAVREQLRHLLNKFKVPRTSSEG 591
Query: 131 NTVRVQKAVCSGFFRNAAKKDPQEGYRTLVDSQVVYIHPSSALFNRQP-EWVIYHELVQT 189
+ + + + SGFF NAA+ YRTL D + +YIHP S L+ +P +WV+++E+VQT
Sbjct: 592 DPDVILRCIVSGFFANAARMHHSGSYRTLRDDRELYIHPDSVLYGEKPPKWVVFNEVVQT 651
Query: 190 TKEYMREVTSIDPKWLVEFAPAFFKFSDPTKLS 222
+K YMR+VT+++ WLVE AP F+K + LS
Sbjct: 652 SKYYMRDVTAVESSWLVELAPHFYKQAKHGSLS 684
Score = 242 (90.2 bits), Expect = 1.1e-35, Sum P(2) = 1.1e-35
Identities = 47/114 (41%), Positives = 75/114 (65%)
Query: 331 VRKQLLGIMDRHKLDVVSAGKNTVRVQKAVCSGFFRNAAKKDPQEGYRTLVDSQVVYIHP 390
VR+QL ++++ K+ S+ + + + + SGFF NAA+ YRTL D + +YIHP
Sbjct: 571 VREQLRHLLNKFKVPRTSSEGDPDVILRCIVSGFFANAARMHHSGSYRTLRDDRELYIHP 630
Query: 391 SSALFNRQP-EWVIYHELVQTTKEYMREVTSIDPKWLVEFAPAFFKFSDPTKLS 443
S L+ +P +WV+++E+VQT+K YMR+VT+++ WLVE AP F+K + LS
Sbjct: 631 DSVLYGEKPPKWVVFNEVVQTSKYYMRDVTAVESSWLVELAPHFYKQAKHGSLS 684
Score = 223 (83.6 bits), Expect = 1.1e-35, Sum P(2) = 1.1e-35
Identities = 57/128 (44%), Positives = 76/128 (59%)
Query: 216 SDPTKLSKFKKNQRLEPLQRTNRISFPPGLLKQAVKKRPEIKLIVTSATLDAVKFSSYFF 275
SDP L K+ E +RT GLLK+ +KKR +++LIV SATLDA KF +F
Sbjct: 153 SDPL-LKKYSVLILDEAHERTLYTDIAIGLLKKILKKRRDLRLIVASATLDAKKFQDFFN 211
Query: 276 -----EAP-----IFTIPGRTFPVEVLYTKEPETDYLDASLITVMQIHLREPPGDVLLFL 325
+A I T+ GRTFPV++ YT P DY+ A++ TV++IH E GDVL FL
Sbjct: 212 LNESGDASKDTCGILTVEGRTFPVDIFYTVSPVPDYVKATVETVLKIHETEDDGDVLAFL 271
Query: 326 TGKLDVRK 333
TG+ +V K
Sbjct: 272 TGQEEVEK 279
Score = 168 (64.2 bits), Expect = 8.7e-28, Sum P(2) = 8.7e-28
Identities = 35/88 (39%), Positives = 56/88 (63%)
Query: 463 AWRISREEIDTACEILYERMKSLGPD--VPELIILPVYSALPSEMQTRIFEAAPPGSRKV 520
A+ +EE++ +L E+ ++L L +LP+Y+ LP Q R+FE P RKV
Sbjct: 269 AFLTGQEEVEKVVSLLQEQARTLSRYGMKKHLCVLPMYAGLPYNEQMRVFERMAPTVRKV 328
Query: 521 VIATNIAETSLTIDGIFYVVDPFDIEVR 548
V+ATNIAETS+TI+G+ +V+D +++R
Sbjct: 329 VVATNIAETSITINGVVFVIDCAFVKIR 356
Score = 39 (18.8 bits), Expect = 1.7e-42, Sum P(2) = 1.7e-42
Identities = 7/11 (63%), Positives = 11/11 (100%)
Query: 1 MDSLVVTPISQ 11
++SL+VTPIS+
Sbjct: 364 IESLIVTPISK 374
>ASPGD|ASPL0000059403 [details] [associations]
symbol:AN0133 species:162425 "Emericella nidulans"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0000462 "maturation of SSU-rRNA from
tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)"
evidence=IEA] [GO:0000466 "maturation of 5.8S rRNA from
tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)"
evidence=IEA] [GO:0000463 "maturation of LSU-rRNA from tricistronic
rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)" evidence=IEA]
[GO:0000390 "spliceosomal complex disassembly" evidence=IEA]
[GO:0004004 "ATP-dependent RNA helicase activity" evidence=IEA]
[GO:0030686 "90S preribosome" evidence=IEA] [GO:0005739
"mitochondrion" evidence=IEA] [GO:0071014 "post-mRNA release
spliceosomal complex" evidence=IEA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
EMBL:BN001308 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 EMBL:AACD01000004 eggNOG:COG1643 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 HOGENOM:HOG000175261 KO:K12820
OMA:TVLQIHA OrthoDB:EOG4S7NZ4 RefSeq:XP_657737.1 STRING:Q5BH47
EnsemblFungi:CADANIAT00002613 GeneID:2875910 KEGG:ani:AN0133.2
Uniprot:Q5BH47
Length = 769
Score = 432 (157.1 bits), Expect = 6.7e-40, P = 6.7e-40
Identities = 86/221 (38%), Positives = 139/221 (62%)
Query: 6 VTPISQMA-EFPLEPNLSKMLIMSVHLQCSDEVLTIVSMLSVQNVFYRPXXXXXXXXXXX 64
+TP+ ++A EFPL+P L+ MLI S CS+E+L+I ++LSV +F RP
Sbjct: 518 LTPLGRLASEFPLDPALAVMLISSPEFYCSNEILSITALLSVPQIFVRPASQRKRADEMK 577
Query: 65 XXFNQMEGDHITLLAVYNSWRNNKFSN---AWCYENFVQIRTLKRAQDVRKQLLGIMDRH 121
F +GDH+TLL Y+++++ + WC+++F+ +R+L+ A +VR QLL IM+R
Sbjct: 578 NLFAHPDGDHLTLLNAYHAFKSPEAQENPKQWCHDHFLSLRSLQSADNVRMQLLRIMERE 637
Query: 122 KLDVVSAG----KNTVRVQKAVCSGFFRNAAKKDPQ--EGYRTLVDSQVVYIHPSSALFN 175
+L+++S K +++A+C+GFF AKK+ Q Y T+ D Q V +HPS+ L +
Sbjct: 638 ELEMISTSFEDKKYYENIRRALCAGFFMQVAKKENQGKSMYMTIKDHQNVLLHPSTVLAH 697
Query: 176 RQPEWVIYHELVQTTKEYMREVTSIDPKWLVEFAPAFFKFS 216
EWV+Y+E V TTK Y+R VT++ P+WL++ AP ++ S
Sbjct: 698 -DAEWVLYNEFVLTTKNYIRTVTAVKPEWLIDIAPTYYDIS 737
Score = 288 (106.4 bits), Expect = 2.3e-42, Sum P(2) = 2.3e-42
Identities = 55/112 (49%), Positives = 79/112 (70%)
Query: 220 KLSKFKKNQRLEPLQRTNRISFPPGLLKQAVKKRPEIKLIVTSATLDAVKFSSYFFEAPI 279
+LS++ E +RT GLLK+ V++RP++K+I+ SATLDA KF YF +AP+
Sbjct: 211 ELSRYSTIILDEAHERTMSTDVLMGLLKEVVQRRPDLKIIIMSATLDAQKFQRYFNDAPL 270
Query: 280 FTIPGRTFPVEVLYTKEPETDYLDASLITVMQIHLREPPGDVLLFLTGKLDV 331
+PGRT PVE+ YT EPE DY++A++ TV+QIH E GD+LLFLTG+ ++
Sbjct: 271 LAVPGRTHPVEIFYTPEPEQDYVEAAIRTVLQIHATEDEGDILLFLTGEEEI 322
Score = 238 (88.8 bits), Expect = 2.3e-42, Sum P(2) = 2.3e-42
Identities = 48/114 (42%), Positives = 74/114 (64%)
Query: 330 DVRKQLLGIMDRHKLDVVSAG----KNTVRVQKAVCSGFFRNAAKKDPQ--EGYRTLVDS 383
+VR QLL IM+R +L+++S K +++A+C+GFF AKK+ Q Y T+ D
Sbjct: 625 NVRMQLLRIMEREELEMISTSFEDKKYYENIRRALCAGFFMQVAKKENQGKSMYMTIKDH 684
Query: 384 QVVYIHPSSALFNRQPEWVIYHELVQTTKEYMREVTSIDPKWLVEFAPAFFKFS 437
Q V +HPS+ L + EWV+Y+E V TTK Y+R VT++ P+WL++ AP ++ S
Sbjct: 685 QNVLLHPSTVLAH-DAEWVLYNEFVLTTKNYIRTVTAVKPEWLIDIAPTYYDIS 737
Score = 162 (62.1 bits), Expect = 2.2e-34, Sum P(2) = 2.2e-34
Identities = 43/83 (51%), Positives = 52/83 (62%)
Query: 469 EEI-DTACEILYERMKSLGP-DVPELIILPVYSALPSEMQTRIFEAAPP----GSR---K 519
EEI D A +I E + + D L + +Y +LP MQ RIFE APP G R K
Sbjct: 320 EEIEDAARKISLEGDEMIREADAGPLKVYTLYGSLPPHMQQRIFEPAPPPRRPGGRPGRK 379
Query: 520 VVIATNIAETSLTIDGIFYVVDP 542
V+++TNIAETSLTIDGI YVVDP
Sbjct: 380 VIVSTNIAETSLTIDGIVYVVDP 402
>UNIPROTKB|B4DVG8 [details] [associations]
symbol:DHX38 "Uncharacterized protein" species:9606 "Homo
sapiens" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0004386 "helicase
activity" evidence=IEA] InterPro:IPR001650 InterPro:IPR007502
Pfam:PF00271 Pfam:PF04408 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 GO:GO:0005524 GO:GO:0003676 GO:GO:0004386
InterPro:IPR011709 Pfam:PF07717 HOGENOM:HOG000175261 EMBL:AC009087
UniGene:Hs.151218 HGNC:HGNC:17211 ChiTaRS:DHX38 EMBL:AK301074
IPI:IPI00909589 SMR:B4DVG8 STRING:B4DVG8 Ensembl:ENST00000536867
UCSC:uc010vmp.2 HOVERGEN:HBG093770 Uniprot:B4DVG8
Length = 539
Score = 447 (162.4 bits), Expect = 3.2e-42, P = 3.2e-42
Identities = 88/220 (40%), Positives = 132/220 (60%)
Query: 12 MAEFPLEPNLSKMLIMSVHLQCSDEVLTIVSMLSVQNVFYRPXXXXXXXXXXXXXFNQME 71
M EFPL+P LSKMLI+S + CS E+L IVSMLSV +FYRP F E
Sbjct: 258 MVEFPLDPALSKMLIVSCDMGCSSEILLIVSMLSVPAIFYRPKGREEESDQIREKFAVPE 317
Query: 72 GDHITLLAVYNSWRNNKFSNAWCYENFVQIRTLKRAQDVRKQLLGIMDRHKLDVVSAGKN 131
DH+T L VY W+NN +S WC ++F+ + +++ ++VR QL IM + ++ + S G +
Sbjct: 318 SDHLTYLNVYLQWKNNNYSTIWCNDHFIHAKAMRKVREVRAQLKDIMVQQRMSLASCGTD 377
Query: 132 TVRVQKAVCSGFFRNAAKKDPQEGYRTLVDSQVVYIHPSSALFNR--QPEWVIYHELVQT 189
V+K +C+ +F AAK Y + ++HP+S+LF P++++YHELV T
Sbjct: 378 WDIVRKCICAAYFHQAAKLKGIGEYVNIRTGMPCHLHPTSSLFGMGYTPDYIVYHELVMT 437
Query: 190 TKEYMREVTSIDPKWLVEFAPAFFKFSDPTKLSKFKKNQR 229
TKEYM+ VT++D +WL E P F+ K S+ ++N+R
Sbjct: 438 TKEYMQCVTAVDGEWLAELGPMFYSVKQAGK-SR-QENRR 475
Score = 218 (81.8 bits), Expect = 1.1e-14, P = 1.1e-14
Identities = 48/144 (33%), Positives = 81/144 (56%)
Query: 330 DVRKQLLGIMDRHKLDVVSAGKNTVRVQKAVCSGFFRNAAKKDPQEGYRTLVDSQVVYIH 389
+VR QL IM + ++ + S G + V+K +C+ +F AAK Y + ++H
Sbjct: 355 EVRAQLKDIMVQQRMSLASCGTDWDIVRKCICAAYFHQAAKLKGIGEYVNIRTGMPCHLH 414
Query: 390 PSSALFNR--QPEWVIYHELVQTTKEYMREVTSIDPKWLVEFAPAFFKFSDPTKLSKFKK 447
P+S+LF P++++YHELV TTKEYM+ VT++D +WL E P F+ K S+ +
Sbjct: 415 PTSSLFGMGYTPDYIVYHELVMTTKEYMQCVTAVDGEWLAELGPMFYSVKQAGK-SRQEN 473
Query: 448 NQRLEPLYNKYEEPNAWRISREEI 471
+R + + EE A ++ E++
Sbjct: 474 RRRAKEEASAMEEEMA--LAEEQL 495
Score = 128 (50.1 bits), Expect = 8.2e-05, P = 8.2e-05
Identities = 23/36 (63%), Positives = 30/36 (83%)
Query: 506 QTRIFEAAPPGSRKVVIATNIAETSLTIDGIFYVVD 541
Q +IF+ AP G RK ++ATNIAETSLT+DGI +V+D
Sbjct: 99 QAKIFQKAPDGVRKCIVATNIAETSLTVDGIMFVID 134
>UNIPROTKB|F1NHI3 [details] [associations]
symbol:DHX15 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005689 "U12-type spliceosomal complex"
evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 GeneTree:ENSGT00650000093246 OMA:TVLQIHA
GO:GO:0005689 EMBL:AADN02015408 EMBL:AADN02015409 EMBL:AADN02015410
IPI:IPI00577528 Ensembl:ENSGALT00000023259 Uniprot:F1NHI3
Length = 762
Score = 453 (164.5 bits), Expect = 3.2e-42, P = 3.2e-42
Identities = 95/230 (41%), Positives = 140/230 (60%)
Query: 10 SQMAEFPLEPNLSKMLIMSVHLQCSDEVLTIVSMLSVQNVFYRPXXXXXXXXXXXXXFNQ 69
S MAEFPL+P L+KM+I S CS+EVL+I +MLSV F RP F
Sbjct: 527 SMMAEFPLDPQLAKMVIASCDYNCSNEVLSITAMLSVPQCFVRPTEAKKAADEAKMRFAH 586
Query: 70 MEGDHITLLAVYNSWRNNKFSNAWCYENFVQIRTLKRAQDVRKQLLGIMDRHKLDVVSAG 129
++GDH+TLL VY++++ N S WCY+NF+ R+L A +VR+QL IMDR L S
Sbjct: 587 IDGDHLTLLNVYHAFKQNHESVQWCYDNFINYRSLMSADNVRQQLSRIMDRFNLPRRSTD 646
Query: 130 KNT----VRVQKAVCSGFFRNAAKKDPQEGYRTLVDSQVVYIHPSSALFNRQPEWVIYHE 185
+ + ++KA+ +G+F A + Y T+ D+QVV +HPS+ L + +PEWV+Y+E
Sbjct: 647 FTSRDYYINIRKALVTGYFMQVAHLERTGHYLTVKDNQVVQLHPSTVL-DHKPEWVLYNE 705
Query: 186 LVQTTKEYMREVTSIDPKWLVEFAPAFFKFSD-PTKLSKFKKNQRLEPLQ 234
V TTK Y+R T I P+WLV+ AP ++ S+ P +K + ++ + LQ
Sbjct: 706 FVLTTKNYIRTCTDIKPEWLVKIAPQYYDMSNFPQCEAKRQLDRIIAKLQ 755
Score = 269 (99.8 bits), Expect = 3.4e-38, Sum P(2) = 3.4e-38
Identities = 54/102 (52%), Positives = 73/102 (71%)
Query: 231 EPLQRTNRISFPPGLLKQAVKKRPEIKLIVTSATLDAVKFSSYFFEAPIFTIPGRTFPVE 290
E +RT G+LK+ V++R ++K+IV SATLDA KF YF P+ TIPGRT PVE
Sbjct: 228 EAHERTLATDILMGVLKEVVRQRADLKVIVMSATLDAGKFQIYFDNCPLLTIPGRTHPVE 287
Query: 291 VLYTKEPETDYLDASLITVMQIHL-REPPGDVLLFLTGKLDV 331
+ YT EPE DYL+A++ TV+QIH+ E GD+LLFLTG+ ++
Sbjct: 288 IFYTPEPERDYLEAAIRTVIQIHMCEEEEGDLLLFLTGQEEI 329
Score = 219 (82.2 bits), Expect = 3.4e-38, Sum P(2) = 3.4e-38
Identities = 50/133 (37%), Positives = 80/133 (60%)
Query: 330 DVRKQLLGIMDRHKLDVVSAGKNT----VRVQKAVCSGFFRNAAKKDPQEGYRTLVDSQV 385
+VR+QL IMDR L S + + ++KA+ +G+F A + Y T+ D+QV
Sbjct: 626 NVRQQLSRIMDRFNLPRRSTDFTSRDYYINIRKALVTGYFMQVAHLERTGHYLTVKDNQV 685
Query: 386 VYIHPSSALFNRQPEWVIYHELVQTTKEYMREVTSIDPKWLVEFAPAFFKFSD-PTKLSK 444
V +HPS+ L + +PEWV+Y+E V TTK Y+R T I P+WLV+ AP ++ S+ P +K
Sbjct: 686 VQLHPSTVL-DHKPEWVLYNEFVLTTKNYIRTCTDIKPEWLVKIAPQYYDMSNFPQCEAK 744
Query: 445 FKKNQRLEPLYNK 457
+ ++ + L +K
Sbjct: 745 RQLDRIIAKLQSK 757
Score = 212 (79.7 bits), Expect = 1.9e-37, Sum P(2) = 1.9e-37
Identities = 43/81 (53%), Positives = 59/81 (72%)
Query: 468 REEIDTACEILYERMKSLGPDVPELIILPVYSALPSEMQTRIFEAAPP----GS--RKVV 521
+EEID AC+ + + LGP+V ++ I+P+YS LP + Q RIFE PP G+ RKVV
Sbjct: 326 QEEIDEACKRIKREIDDLGPEVGDIKIIPLYSTLPPQQQQRIFEPPPPKKQNGAIGRKVV 385
Query: 522 IATNIAETSLTIDGIFYVVDP 542
++TNIAETSLTIDG+ +V+DP
Sbjct: 386 VSTNIAETSLTIDGVVFVIDP 406
Score = 39 (18.8 bits), Expect = 9.6e-14, Sum P(2) = 9.6e-14
Identities = 7/33 (21%), Positives = 17/33 (51%)
Query: 15 FPLEPNLSKMLIMSVHLQCSDEVLTIVSMLSVQ 47
F ++P +K + + ++ ++T +S S Q
Sbjct: 402 FVIDPGFAKQKVYNPRIRVESLLVTAISKASAQ 434
>UNIPROTKB|A5D7D9 [details] [associations]
symbol:DHX15 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005689 "U12-type spliceosomal complex" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR003593 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00382 SMART:SM00490 SMART:SM00847
GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 HOGENOM:HOG000175261 KO:K12820
GeneTree:ENSGT00650000093246 OMA:TVLQIHA CTD:1665
HOVERGEN:HBG039428 OrthoDB:EOG4K6G3N GO:GO:0005689
EMBL:DAAA02017121 EMBL:BC140520 IPI:IPI00709068
RefSeq:NP_001091487.1 UniGene:Bt.58909 Ensembl:ENSBTAT00000011714
GeneID:512327 KEGG:bta:512327 InParanoid:A5D7D9 NextBio:20870343
Uniprot:A5D7D9
Length = 795
Score = 453 (164.5 bits), Expect = 4.0e-42, P = 4.0e-42
Identities = 95/230 (41%), Positives = 140/230 (60%)
Query: 10 SQMAEFPLEPNLSKMLIMSVHLQCSDEVLTIVSMLSVQNVFYRPXXXXXXXXXXXXXFNQ 69
S MAEFPL+P L+KM+I S CS+EVL+I +MLSV F RP F
Sbjct: 560 SMMAEFPLDPQLAKMVIASCDYNCSNEVLSITAMLSVPQCFVRPTEAKKAADEAKMRFAH 619
Query: 70 MEGDHITLLAVYNSWRNNKFSNAWCYENFVQIRTLKRAQDVRKQLLGIMDRHKLDVVSAG 129
++GDH+TLL VY++++ N S WCY+NF+ R+L A +VR+QL IMDR L S
Sbjct: 620 IDGDHLTLLNVYHAFKQNHESVQWCYDNFINYRSLMSADNVRQQLSRIMDRFNLPRRSTD 679
Query: 130 KNT----VRVQKAVCSGFFRNAAKKDPQEGYRTLVDSQVVYIHPSSALFNRQPEWVIYHE 185
+ + ++KA+ +G+F A + Y T+ D+QVV +HPS+ L + +PEWV+Y+E
Sbjct: 680 FTSRDYYINIRKALVTGYFMQVAHLERTGHYLTVKDNQVVQLHPSTVL-DHKPEWVLYNE 738
Query: 186 LVQTTKEYMREVTSIDPKWLVEFAPAFFKFSD-PTKLSKFKKNQRLEPLQ 234
V TTK Y+R T I P+WLV+ AP ++ S+ P +K + ++ + LQ
Sbjct: 739 FVLTTKNYIRTCTDIKPEWLVKIAPQYYDMSNFPQCEAKRQLDRIIAKLQ 788
Score = 269 (99.8 bits), Expect = 4.0e-38, Sum P(2) = 4.0e-38
Identities = 54/102 (52%), Positives = 73/102 (71%)
Query: 231 EPLQRTNRISFPPGLLKQAVKKRPEIKLIVTSATLDAVKFSSYFFEAPIFTIPGRTFPVE 290
E +RT G+LK+ V++R ++K+IV SATLDA KF YF P+ TIPGRT PVE
Sbjct: 261 EAHERTLATDILMGVLKEVVRQRSDLKVIVMSATLDAGKFQIYFDNCPLLTIPGRTHPVE 320
Query: 291 VLYTKEPETDYLDASLITVMQIHL-REPPGDVLLFLTGKLDV 331
+ YT EPE DYL+A++ TV+QIH+ E GD+LLFLTG+ ++
Sbjct: 321 IFYTPEPERDYLEAAIRTVIQIHMCEEEEGDLLLFLTGQEEI 362
Score = 219 (82.2 bits), Expect = 4.0e-38, Sum P(2) = 4.0e-38
Identities = 50/133 (37%), Positives = 80/133 (60%)
Query: 330 DVRKQLLGIMDRHKLDVVSAGKNT----VRVQKAVCSGFFRNAAKKDPQEGYRTLVDSQV 385
+VR+QL IMDR L S + + ++KA+ +G+F A + Y T+ D+QV
Sbjct: 659 NVRQQLSRIMDRFNLPRRSTDFTSRDYYINIRKALVTGYFMQVAHLERTGHYLTVKDNQV 718
Query: 386 VYIHPSSALFNRQPEWVIYHELVQTTKEYMREVTSIDPKWLVEFAPAFFKFSD-PTKLSK 444
V +HPS+ L + +PEWV+Y+E V TTK Y+R T I P+WLV+ AP ++ S+ P +K
Sbjct: 719 VQLHPSTVL-DHKPEWVLYNEFVLTTKNYIRTCTDIKPEWLVKIAPQYYDMSNFPQCEAK 777
Query: 445 FKKNQRLEPLYNK 457
+ ++ + L +K
Sbjct: 778 RQLDRIIAKLQSK 790
Score = 212 (79.7 bits), Expect = 2.2e-37, Sum P(2) = 2.2e-37
Identities = 43/81 (53%), Positives = 59/81 (72%)
Query: 468 REEIDTACEILYERMKSLGPDVPELIILPVYSALPSEMQTRIFEAAPP----GS--RKVV 521
+EEID AC+ + + LGP+V ++ I+P+YS LP + Q RIFE PP G+ RKVV
Sbjct: 359 QEEIDEACKRIKREVDDLGPEVGDIKIIPLYSTLPPQQQQRIFEPPPPKKQNGAIGRKVV 418
Query: 522 IATNIAETSLTIDGIFYVVDP 542
++TNIAETSLTIDG+ +V+DP
Sbjct: 419 VSTNIAETSLTIDGVVFVIDP 439
Score = 39 (18.8 bits), Expect = 1.1e-13, Sum P(2) = 1.1e-13
Identities = 7/33 (21%), Positives = 17/33 (51%)
Query: 15 FPLEPNLSKMLIMSVHLQCSDEVLTIVSMLSVQ 47
F ++P +K + + ++ ++T +S S Q
Sbjct: 435 FVIDPGFAKQKVYNPRIRVESLLVTAISKASAQ 467
>UNIPROTKB|E2R2U3 [details] [associations]
symbol:DHX15 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005689 "U12-type spliceosomal complex"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0003676
"nucleic acid binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR003593 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408
PROSITE:PS00690 PROSITE:PS51194 SMART:SM00382 SMART:SM00490
SMART:SM00847 GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 KO:K12820 GeneTree:ENSGT00650000093246 OMA:TVLQIHA
CTD:1665 GO:GO:0005689 EMBL:AAEX03002593 EMBL:AAEX03002594
RefSeq:XP_851535.1 Ensembl:ENSCAFT00000026155 GeneID:488856
KEGG:cfa:488856 NextBio:20862139 Uniprot:E2R2U3
Length = 795
Score = 453 (164.5 bits), Expect = 4.0e-42, P = 4.0e-42
Identities = 95/230 (41%), Positives = 140/230 (60%)
Query: 10 SQMAEFPLEPNLSKMLIMSVHLQCSDEVLTIVSMLSVQNVFYRPXXXXXXXXXXXXXFNQ 69
S MAEFPL+P L+KM+I S CS+EVL+I +MLSV F RP F
Sbjct: 560 SMMAEFPLDPQLAKMVIASCDYNCSNEVLSITAMLSVPQCFVRPTEAKKAADEAKMRFAH 619
Query: 70 MEGDHITLLAVYNSWRNNKFSNAWCYENFVQIRTLKRAQDVRKQLLGIMDRHKLDVVSAG 129
++GDH+TLL VY++++ N S WCY+NF+ R+L A +VR+QL IMDR L S
Sbjct: 620 IDGDHLTLLNVYHAFKQNHESVQWCYDNFINYRSLMSADNVRQQLSRIMDRFNLPRRSTD 679
Query: 130 KNT----VRVQKAVCSGFFRNAAKKDPQEGYRTLVDSQVVYIHPSSALFNRQPEWVIYHE 185
+ + ++KA+ +G+F A + Y T+ D+QVV +HPS+ L + +PEWV+Y+E
Sbjct: 680 FTSRDYYINIRKALVTGYFMQVAHLERTGHYLTVKDNQVVQLHPSTVL-DHKPEWVLYNE 738
Query: 186 LVQTTKEYMREVTSIDPKWLVEFAPAFFKFSD-PTKLSKFKKNQRLEPLQ 234
V TTK Y+R T I P+WLV+ AP ++ S+ P +K + ++ + LQ
Sbjct: 739 FVLTTKNYIRTCTDIKPEWLVKIAPQYYDMSNFPQCEAKRQLDRIIAKLQ 788
Score = 269 (99.8 bits), Expect = 4.0e-38, Sum P(2) = 4.0e-38
Identities = 54/102 (52%), Positives = 73/102 (71%)
Query: 231 EPLQRTNRISFPPGLLKQAVKKRPEIKLIVTSATLDAVKFSSYFFEAPIFTIPGRTFPVE 290
E +RT G+LK+ V++R ++K+IV SATLDA KF YF P+ TIPGRT PVE
Sbjct: 261 EAHERTLATDILMGVLKEVVRQRSDLKVIVMSATLDAGKFQIYFDNCPLLTIPGRTHPVE 320
Query: 291 VLYTKEPETDYLDASLITVMQIHL-REPPGDVLLFLTGKLDV 331
+ YT EPE DYL+A++ TV+QIH+ E GD+LLFLTG+ ++
Sbjct: 321 IFYTPEPERDYLEAAIRTVIQIHMCEEEEGDLLLFLTGQEEI 362
Score = 219 (82.2 bits), Expect = 4.0e-38, Sum P(2) = 4.0e-38
Identities = 50/133 (37%), Positives = 80/133 (60%)
Query: 330 DVRKQLLGIMDRHKLDVVSAGKNT----VRVQKAVCSGFFRNAAKKDPQEGYRTLVDSQV 385
+VR+QL IMDR L S + + ++KA+ +G+F A + Y T+ D+QV
Sbjct: 659 NVRQQLSRIMDRFNLPRRSTDFTSRDYYINIRKALVTGYFMQVAHLERTGHYLTVKDNQV 718
Query: 386 VYIHPSSALFNRQPEWVIYHELVQTTKEYMREVTSIDPKWLVEFAPAFFKFSD-PTKLSK 444
V +HPS+ L + +PEWV+Y+E V TTK Y+R T I P+WLV+ AP ++ S+ P +K
Sbjct: 719 VQLHPSTVL-DHKPEWVLYNEFVLTTKNYIRTCTDIKPEWLVKIAPQYYDMSNFPQCEAK 777
Query: 445 FKKNQRLEPLYNK 457
+ ++ + L +K
Sbjct: 778 RQLDRIIAKLQSK 790
Score = 212 (79.7 bits), Expect = 2.2e-37, Sum P(2) = 2.2e-37
Identities = 43/81 (53%), Positives = 59/81 (72%)
Query: 468 REEIDTACEILYERMKSLGPDVPELIILPVYSALPSEMQTRIFEAAPP----GS--RKVV 521
+EEID AC+ + + LGP+V ++ I+P+YS LP + Q RIFE PP G+ RKVV
Sbjct: 359 QEEIDEACKRIKREVDDLGPEVGDIKIIPLYSTLPPQQQQRIFEPPPPKKQNGAIGRKVV 418
Query: 522 IATNIAETSLTIDGIFYVVDP 542
++TNIAETSLTIDG+ +V+DP
Sbjct: 419 VSTNIAETSLTIDGVVFVIDP 439
Score = 39 (18.8 bits), Expect = 1.1e-13, Sum P(2) = 1.1e-13
Identities = 7/33 (21%), Positives = 17/33 (51%)
Query: 15 FPLEPNLSKMLIMSVHLQCSDEVLTIVSMLSVQ 47
F ++P +K + + ++ ++T +S S Q
Sbjct: 435 FVIDPGFAKQKVYNPRIRVESLLVTAISKASAQ 467
>UNIPROTKB|O43143 [details] [associations]
symbol:DHX15 "Putative pre-mRNA-splicing factor
ATP-dependent RNA helicase DHX15" species:9606 "Homo sapiens"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0006397 "mRNA processing" evidence=IEA]
[GO:0005730 "nucleolus" evidence=IEA] [GO:0003724 "RNA helicase
activity" evidence=TAS] [GO:0008380 "RNA splicing" evidence=IC]
[GO:0005689 "U12-type spliceosomal complex" evidence=IDA]
[GO:0005634 "nucleus" evidence=IDA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR003593 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408
PROSITE:PS00690 PROSITE:PS51194 SMART:SM00382 SMART:SM00490
SMART:SM00847 EMBL:AB001636 GO:GO:0005524 GO:GO:0005730
GO:GO:0008380 GO:GO:0006397 GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 HOGENOM:HOG000175261 GO:GO:0003724
KO:K12820 OMA:TVLQIHA EMBL:AF279891 EMBL:BC035974 IPI:IPI00396435
PIR:JC5785 RefSeq:NP_001349.2 UniGene:Hs.696074
ProteinModelPortal:O43143 SMR:O43143 DIP:DIP-38211N IntAct:O43143
MINT:MINT-5003827 STRING:O43143 PhosphoSite:O43143
SWISS-2DPAGE:O43143 PaxDb:O43143 PRIDE:O43143
Ensembl:ENST00000336812 GeneID:1665 KEGG:hsa:1665 UCSC:uc003gqx.3
CTD:1665 GeneCards:GC04M024519 HGNC:HGNC:2738 HPA:HPA047047
MIM:603403 neXtProt:NX_O43143 PharmGKB:PA27204 HOVERGEN:HBG039428
InParanoid:O43143 OrthoDB:EOG4K6G3N GenomeRNAi:1665 NextBio:6852
ArrayExpress:O43143 Bgee:O43143 CleanEx:HS_DHX15
Genevestigator:O43143 GermOnline:ENSG00000109606 GO:GO:0005689
Uniprot:O43143
Length = 795
Score = 453 (164.5 bits), Expect = 4.0e-42, P = 4.0e-42
Identities = 95/230 (41%), Positives = 140/230 (60%)
Query: 10 SQMAEFPLEPNLSKMLIMSVHLQCSDEVLTIVSMLSVQNVFYRPXXXXXXXXXXXXXFNQ 69
S MAEFPL+P L+KM+I S CS+EVL+I +MLSV F RP F
Sbjct: 560 SMMAEFPLDPQLAKMVIASCDYNCSNEVLSITAMLSVPQCFVRPTEAKKAADEAKMRFAH 619
Query: 70 MEGDHITLLAVYNSWRNNKFSNAWCYENFVQIRTLKRAQDVRKQLLGIMDRHKLDVVSAG 129
++GDH+TLL VY++++ N S WCY+NF+ R+L A +VR+QL IMDR L S
Sbjct: 620 IDGDHLTLLNVYHAFKQNHESVQWCYDNFINYRSLMSADNVRQQLSRIMDRFNLPRRSTD 679
Query: 130 KNT----VRVQKAVCSGFFRNAAKKDPQEGYRTLVDSQVVYIHPSSALFNRQPEWVIYHE 185
+ + ++KA+ +G+F A + Y T+ D+QVV +HPS+ L + +PEWV+Y+E
Sbjct: 680 FTSRDYYINIRKALVTGYFMQVAHLERTGHYLTVKDNQVVQLHPSTVL-DHKPEWVLYNE 738
Query: 186 LVQTTKEYMREVTSIDPKWLVEFAPAFFKFSD-PTKLSKFKKNQRLEPLQ 234
V TTK Y+R T I P+WLV+ AP ++ S+ P +K + ++ + LQ
Sbjct: 739 FVLTTKNYIRTCTDIKPEWLVKIAPQYYDMSNFPQCEAKRQLDRIIAKLQ 788
Score = 269 (99.8 bits), Expect = 4.0e-38, Sum P(2) = 4.0e-38
Identities = 54/102 (52%), Positives = 73/102 (71%)
Query: 231 EPLQRTNRISFPPGLLKQAVKKRPEIKLIVTSATLDAVKFSSYFFEAPIFTIPGRTFPVE 290
E +RT G+LK+ V++R ++K+IV SATLDA KF YF P+ TIPGRT PVE
Sbjct: 261 EAHERTLATDILMGVLKEVVRQRSDLKVIVMSATLDAGKFQIYFDNCPLLTIPGRTHPVE 320
Query: 291 VLYTKEPETDYLDASLITVMQIHL-REPPGDVLLFLTGKLDV 331
+ YT EPE DYL+A++ TV+QIH+ E GD+LLFLTG+ ++
Sbjct: 321 IFYTPEPERDYLEAAIRTVIQIHMCEEEEGDLLLFLTGQEEI 362
Score = 219 (82.2 bits), Expect = 4.0e-38, Sum P(2) = 4.0e-38
Identities = 50/133 (37%), Positives = 80/133 (60%)
Query: 330 DVRKQLLGIMDRHKLDVVSAGKNT----VRVQKAVCSGFFRNAAKKDPQEGYRTLVDSQV 385
+VR+QL IMDR L S + + ++KA+ +G+F A + Y T+ D+QV
Sbjct: 659 NVRQQLSRIMDRFNLPRRSTDFTSRDYYINIRKALVTGYFMQVAHLERTGHYLTVKDNQV 718
Query: 386 VYIHPSSALFNRQPEWVIYHELVQTTKEYMREVTSIDPKWLVEFAPAFFKFSD-PTKLSK 444
V +HPS+ L + +PEWV+Y+E V TTK Y+R T I P+WLV+ AP ++ S+ P +K
Sbjct: 719 VQLHPSTVL-DHKPEWVLYNEFVLTTKNYIRTCTDIKPEWLVKIAPQYYDMSNFPQCEAK 777
Query: 445 FKKNQRLEPLYNK 457
+ ++ + L +K
Sbjct: 778 RQLDRIIAKLQSK 790
Score = 212 (79.7 bits), Expect = 2.2e-37, Sum P(2) = 2.2e-37
Identities = 43/81 (53%), Positives = 59/81 (72%)
Query: 468 REEIDTACEILYERMKSLGPDVPELIILPVYSALPSEMQTRIFEAAPP----GS--RKVV 521
+EEID AC+ + + LGP+V ++ I+P+YS LP + Q RIFE PP G+ RKVV
Sbjct: 359 QEEIDEACKRIKREVDDLGPEVGDIKIIPLYSTLPPQQQQRIFEPPPPKKQNGAIGRKVV 418
Query: 522 IATNIAETSLTIDGIFYVVDP 542
++TNIAETSLTIDG+ +V+DP
Sbjct: 419 VSTNIAETSLTIDGVVFVIDP 439
Score = 39 (18.8 bits), Expect = 1.1e-13, Sum P(2) = 1.1e-13
Identities = 7/33 (21%), Positives = 17/33 (51%)
Query: 15 FPLEPNLSKMLIMSVHLQCSDEVLTIVSMLSVQ 47
F ++P +K + + ++ ++T +S S Q
Sbjct: 435 FVIDPGFAKQKVYNPRIRVESLLVTAISKASAQ 467
>UNIPROTKB|F1S5A8 [details] [associations]
symbol:DHX15 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005689 "U12-type spliceosomal complex" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR003593 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00382 SMART:SM00490 SMART:SM00847
GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
GeneTree:ENSGT00650000093246 OMA:TVLQIHA GO:GO:0005689
EMBL:CU633303 Ensembl:ENSSSCT00000009580 Uniprot:F1S5A8
Length = 795
Score = 453 (164.5 bits), Expect = 4.0e-42, P = 4.0e-42
Identities = 95/230 (41%), Positives = 140/230 (60%)
Query: 10 SQMAEFPLEPNLSKMLIMSVHLQCSDEVLTIVSMLSVQNVFYRPXXXXXXXXXXXXXFNQ 69
S MAEFPL+P L+KM+I S CS+EVL+I +MLSV F RP F
Sbjct: 560 SMMAEFPLDPQLAKMVIASCDYNCSNEVLSITAMLSVPQCFVRPTEAKKAADEAKMRFAH 619
Query: 70 MEGDHITLLAVYNSWRNNKFSNAWCYENFVQIRTLKRAQDVRKQLLGIMDRHKLDVVSAG 129
++GDH+TLL VY++++ N S WCY+NF+ R+L A +VR+QL IMDR L S
Sbjct: 620 IDGDHLTLLNVYHAFKQNHESVQWCYDNFINYRSLMSADNVRQQLSRIMDRFNLPRRSTD 679
Query: 130 KNT----VRVQKAVCSGFFRNAAKKDPQEGYRTLVDSQVVYIHPSSALFNRQPEWVIYHE 185
+ + ++KA+ +G+F A + Y T+ D+QVV +HPS+ L + +PEWV+Y+E
Sbjct: 680 FTSRDYYINIRKALVTGYFMQVAHLERTGHYLTVKDNQVVQLHPSTVL-DHKPEWVLYNE 738
Query: 186 LVQTTKEYMREVTSIDPKWLVEFAPAFFKFSD-PTKLSKFKKNQRLEPLQ 234
V TTK Y+R T I P+WLV+ AP ++ S+ P +K + ++ + LQ
Sbjct: 739 FVLTTKNYIRTCTDIKPEWLVKIAPQYYDMSNFPQCEAKRQLDRIIAKLQ 788
Score = 269 (99.8 bits), Expect = 4.0e-38, Sum P(2) = 4.0e-38
Identities = 54/102 (52%), Positives = 73/102 (71%)
Query: 231 EPLQRTNRISFPPGLLKQAVKKRPEIKLIVTSATLDAVKFSSYFFEAPIFTIPGRTFPVE 290
E +RT G+LK+ V++R ++K+IV SATLDA KF YF P+ TIPGRT PVE
Sbjct: 261 EAHERTLATDILMGVLKEVVRQRSDLKVIVMSATLDAGKFQIYFDNCPLLTIPGRTHPVE 320
Query: 291 VLYTKEPETDYLDASLITVMQIHL-REPPGDVLLFLTGKLDV 331
+ YT EPE DYL+A++ TV+QIH+ E GD+LLFLTG+ ++
Sbjct: 321 IFYTPEPERDYLEAAIRTVIQIHMCEEEEGDLLLFLTGQEEI 362
Score = 219 (82.2 bits), Expect = 4.0e-38, Sum P(2) = 4.0e-38
Identities = 50/133 (37%), Positives = 80/133 (60%)
Query: 330 DVRKQLLGIMDRHKLDVVSAGKNT----VRVQKAVCSGFFRNAAKKDPQEGYRTLVDSQV 385
+VR+QL IMDR L S + + ++KA+ +G+F A + Y T+ D+QV
Sbjct: 659 NVRQQLSRIMDRFNLPRRSTDFTSRDYYINIRKALVTGYFMQVAHLERTGHYLTVKDNQV 718
Query: 386 VYIHPSSALFNRQPEWVIYHELVQTTKEYMREVTSIDPKWLVEFAPAFFKFSD-PTKLSK 444
V +HPS+ L + +PEWV+Y+E V TTK Y+R T I P+WLV+ AP ++ S+ P +K
Sbjct: 719 VQLHPSTVL-DHKPEWVLYNEFVLTTKNYIRTCTDIKPEWLVKIAPQYYDMSNFPQCEAK 777
Query: 445 FKKNQRLEPLYNK 457
+ ++ + L +K
Sbjct: 778 RQLDRIIAKLQSK 790
Score = 212 (79.7 bits), Expect = 2.2e-37, Sum P(2) = 2.2e-37
Identities = 43/81 (53%), Positives = 59/81 (72%)
Query: 468 REEIDTACEILYERMKSLGPDVPELIILPVYSALPSEMQTRIFEAAPP----GS--RKVV 521
+EEID AC+ + + LGP+V ++ I+P+YS LP + Q RIFE PP G+ RKVV
Sbjct: 359 QEEIDEACKRIKREVDDLGPEVGDIKIIPLYSTLPPQQQQRIFEPPPPKKQNGAIGRKVV 418
Query: 522 IATNIAETSLTIDGIFYVVDP 542
++TNIAETSLTIDG+ +V+DP
Sbjct: 419 VSTNIAETSLTIDGVVFVIDP 439
Score = 39 (18.8 bits), Expect = 1.1e-13, Sum P(2) = 1.1e-13
Identities = 7/33 (21%), Positives = 17/33 (51%)
Query: 15 FPLEPNLSKMLIMSVHLQCSDEVLTIVSMLSVQ 47
F ++P +K + + ++ ++T +S S Q
Sbjct: 435 FVIDPGFAKQKVYNPRIRVESLLVTAISKASAQ 467
>MGI|MGI:1099786 [details] [associations]
symbol:Dhx15 "DEAH (Asp-Glu-Ala-His) box polypeptide 15"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0005689 "U12-type spliceosomal complex" evidence=ISO]
[GO:0006397 "mRNA processing" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0008380 "RNA
splicing" evidence=IEA] [GO:0016787 "hydrolase activity"
evidence=IEA] [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR003593 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00382 SMART:SM00490 SMART:SM00847
MGI:MGI:1099786 GO:GO:0005524 GO:GO:0005730 GO:GO:0008380
GO:GO:0006397 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 HOGENOM:HOG000175261 KO:K12820 OMA:TVLQIHA CTD:1665
HOVERGEN:HBG039428 OrthoDB:EOG4K6G3N GO:GO:0005689 EMBL:AF017153
EMBL:BC003745 IPI:IPI00128818 RefSeq:NP_031865.2 UniGene:Mm.993
ProteinModelPortal:O35286 SMR:O35286 STRING:O35286
PhosphoSite:O35286 PaxDb:O35286 PRIDE:O35286
Ensembl:ENSMUST00000031061 GeneID:13204 KEGG:mmu:13204
InParanoid:O35286 NextBio:283358 Bgee:O35286 CleanEx:MM_DHX15
Genevestigator:O35286 GermOnline:ENSMUSG00000029169 Uniprot:O35286
Length = 795
Score = 453 (164.5 bits), Expect = 4.0e-42, P = 4.0e-42
Identities = 95/230 (41%), Positives = 140/230 (60%)
Query: 10 SQMAEFPLEPNLSKMLIMSVHLQCSDEVLTIVSMLSVQNVFYRPXXXXXXXXXXXXXFNQ 69
S MAEFPL+P L+KM+I S CS+EVL+I +MLSV F RP F
Sbjct: 560 SMMAEFPLDPQLAKMVIASCDYNCSNEVLSITAMLSVPQCFVRPTEAKKAADEAKMRFAH 619
Query: 70 MEGDHITLLAVYNSWRNNKFSNAWCYENFVQIRTLKRAQDVRKQLLGIMDRHKLDVVSAG 129
++GDH+TLL VY++++ N S WCY+NF+ R+L A +VR+QL IMDR L S
Sbjct: 620 IDGDHLTLLNVYHAFKQNHESVQWCYDNFINYRSLMSADNVRQQLSRIMDRFNLPRRSTD 679
Query: 130 KNT----VRVQKAVCSGFFRNAAKKDPQEGYRTLVDSQVVYIHPSSALFNRQPEWVIYHE 185
+ + ++KA+ +G+F A + Y T+ D+QVV +HPS+ L + +PEWV+Y+E
Sbjct: 680 FTSRDYYINIRKALVTGYFMQVAHLERTGHYLTVKDNQVVQLHPSTVL-DHKPEWVLYNE 738
Query: 186 LVQTTKEYMREVTSIDPKWLVEFAPAFFKFSD-PTKLSKFKKNQRLEPLQ 234
V TTK Y+R T I P+WLV+ AP ++ S+ P +K + ++ + LQ
Sbjct: 739 FVLTTKNYIRTCTDIKPEWLVKIAPQYYDMSNFPQCEAKRQLDRIIAKLQ 788
Score = 269 (99.8 bits), Expect = 4.0e-38, Sum P(2) = 4.0e-38
Identities = 54/102 (52%), Positives = 73/102 (71%)
Query: 231 EPLQRTNRISFPPGLLKQAVKKRPEIKLIVTSATLDAVKFSSYFFEAPIFTIPGRTFPVE 290
E +RT G+LK+ V++R ++K+IV SATLDA KF YF P+ TIPGRT PVE
Sbjct: 261 EAHERTLATDILMGVLKEVVRQRSDLKVIVMSATLDAGKFQIYFDNCPLLTIPGRTHPVE 320
Query: 291 VLYTKEPETDYLDASLITVMQIHL-REPPGDVLLFLTGKLDV 331
+ YT EPE DYL+A++ TV+QIH+ E GD+LLFLTG+ ++
Sbjct: 321 IFYTPEPERDYLEAAIRTVIQIHMCEEEEGDLLLFLTGQEEI 362
Score = 219 (82.2 bits), Expect = 4.0e-38, Sum P(2) = 4.0e-38
Identities = 50/133 (37%), Positives = 80/133 (60%)
Query: 330 DVRKQLLGIMDRHKLDVVSAGKNT----VRVQKAVCSGFFRNAAKKDPQEGYRTLVDSQV 385
+VR+QL IMDR L S + + ++KA+ +G+F A + Y T+ D+QV
Sbjct: 659 NVRQQLSRIMDRFNLPRRSTDFTSRDYYINIRKALVTGYFMQVAHLERTGHYLTVKDNQV 718
Query: 386 VYIHPSSALFNRQPEWVIYHELVQTTKEYMREVTSIDPKWLVEFAPAFFKFSD-PTKLSK 444
V +HPS+ L + +PEWV+Y+E V TTK Y+R T I P+WLV+ AP ++ S+ P +K
Sbjct: 719 VQLHPSTVL-DHKPEWVLYNEFVLTTKNYIRTCTDIKPEWLVKIAPQYYDMSNFPQCEAK 777
Query: 445 FKKNQRLEPLYNK 457
+ ++ + L +K
Sbjct: 778 RQLDRIIAKLQSK 790
Score = 212 (79.7 bits), Expect = 2.2e-37, Sum P(2) = 2.2e-37
Identities = 43/81 (53%), Positives = 59/81 (72%)
Query: 468 REEIDTACEILYERMKSLGPDVPELIILPVYSALPSEMQTRIFEAAPP----GS--RKVV 521
+EEID AC+ + + LGP+V ++ I+P+YS LP + Q RIFE PP G+ RKVV
Sbjct: 359 QEEIDEACKRIKREVDDLGPEVGDIKIIPLYSTLPPQQQQRIFEPPPPKKQNGAIGRKVV 418
Query: 522 IATNIAETSLTIDGIFYVVDP 542
++TNIAETSLTIDG+ +V+DP
Sbjct: 419 VSTNIAETSLTIDGVVFVIDP 439
Score = 39 (18.8 bits), Expect = 1.1e-13, Sum P(2) = 1.1e-13
Identities = 7/33 (21%), Positives = 17/33 (51%)
Query: 15 FPLEPNLSKMLIMSVHLQCSDEVLTIVSMLSVQ 47
F ++P +K + + ++ ++T +S S Q
Sbjct: 435 FVIDPGFAKQKVYNPRIRVESLLVTAISKASAQ 467
>RGD|1308072 [details] [associations]
symbol:Dhx15 "DEAH (Asp-Glu-Ala-His) box polypeptide 15"
species:10116 "Rattus norvegicus" [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISO] [GO:0005689 "U12-type
spliceosomal complex" evidence=IEA;ISO] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR003593 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408
PROSITE:PS00690 PROSITE:PS51194 SMART:SM00382 SMART:SM00490
SMART:SM00847 RGD:1308072 GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 KO:K12820 GeneTree:ENSGT00650000093246
OMA:TVLQIHA CTD:1665 OrthoDB:EOG4K6G3N GO:GO:0005689 EMBL:CH473963
IPI:IPI00361832 RefSeq:NP_001178526.1 UniGene:Rn.55597
Ensembl:ENSRNOT00000005126 GeneID:289693 KEGG:rno:289693
NextBio:630162 Uniprot:D3ZD97
Length = 795
Score = 453 (164.5 bits), Expect = 4.0e-42, P = 4.0e-42
Identities = 95/230 (41%), Positives = 140/230 (60%)
Query: 10 SQMAEFPLEPNLSKMLIMSVHLQCSDEVLTIVSMLSVQNVFYRPXXXXXXXXXXXXXFNQ 69
S MAEFPL+P L+KM+I S CS+EVL+I +MLSV F RP F
Sbjct: 560 SMMAEFPLDPQLAKMVIASCDYNCSNEVLSITAMLSVPQCFVRPTEAKKAADEAKMRFAH 619
Query: 70 MEGDHITLLAVYNSWRNNKFSNAWCYENFVQIRTLKRAQDVRKQLLGIMDRHKLDVVSAG 129
++GDH+TLL VY++++ N S WCY+NF+ R+L A +VR+QL IMDR L S
Sbjct: 620 IDGDHLTLLNVYHAFKQNHESVQWCYDNFINYRSLMSADNVRQQLSRIMDRFNLPRRSTD 679
Query: 130 KNT----VRVQKAVCSGFFRNAAKKDPQEGYRTLVDSQVVYIHPSSALFNRQPEWVIYHE 185
+ + ++KA+ +G+F A + Y T+ D+QVV +HPS+ L + +PEWV+Y+E
Sbjct: 680 FTSRDYYINIRKALVTGYFMQVAHLERTGHYLTVKDNQVVQLHPSTVL-DHKPEWVLYNE 738
Query: 186 LVQTTKEYMREVTSIDPKWLVEFAPAFFKFSD-PTKLSKFKKNQRLEPLQ 234
V TTK Y+R T I P+WLV+ AP ++ S+ P +K + ++ + LQ
Sbjct: 739 FVLTTKNYIRTCTDIKPEWLVKIAPQYYDMSNFPQCEAKRQLDRIIAKLQ 788
Score = 269 (99.8 bits), Expect = 4.0e-38, Sum P(2) = 4.0e-38
Identities = 54/102 (52%), Positives = 73/102 (71%)
Query: 231 EPLQRTNRISFPPGLLKQAVKKRPEIKLIVTSATLDAVKFSSYFFEAPIFTIPGRTFPVE 290
E +RT G+LK+ V++R ++K+IV SATLDA KF YF P+ TIPGRT PVE
Sbjct: 261 EAHERTLATDILMGVLKEVVRQRSDLKVIVMSATLDAGKFQIYFDNCPLLTIPGRTHPVE 320
Query: 291 VLYTKEPETDYLDASLITVMQIHL-REPPGDVLLFLTGKLDV 331
+ YT EPE DYL+A++ TV+QIH+ E GD+LLFLTG+ ++
Sbjct: 321 IFYTPEPERDYLEAAIRTVIQIHMCEEEEGDLLLFLTGQEEI 362
Score = 219 (82.2 bits), Expect = 4.0e-38, Sum P(2) = 4.0e-38
Identities = 50/133 (37%), Positives = 80/133 (60%)
Query: 330 DVRKQLLGIMDRHKLDVVSAGKNT----VRVQKAVCSGFFRNAAKKDPQEGYRTLVDSQV 385
+VR+QL IMDR L S + + ++KA+ +G+F A + Y T+ D+QV
Sbjct: 659 NVRQQLSRIMDRFNLPRRSTDFTSRDYYINIRKALVTGYFMQVAHLERTGHYLTVKDNQV 718
Query: 386 VYIHPSSALFNRQPEWVIYHELVQTTKEYMREVTSIDPKWLVEFAPAFFKFSD-PTKLSK 444
V +HPS+ L + +PEWV+Y+E V TTK Y+R T I P+WLV+ AP ++ S+ P +K
Sbjct: 719 VQLHPSTVL-DHKPEWVLYNEFVLTTKNYIRTCTDIKPEWLVKIAPQYYDMSNFPQCEAK 777
Query: 445 FKKNQRLEPLYNK 457
+ ++ + L +K
Sbjct: 778 RQLDRIIAKLQSK 790
Score = 212 (79.7 bits), Expect = 2.2e-37, Sum P(2) = 2.2e-37
Identities = 43/81 (53%), Positives = 59/81 (72%)
Query: 468 REEIDTACEILYERMKSLGPDVPELIILPVYSALPSEMQTRIFEAAPP----GS--RKVV 521
+EEID AC+ + + LGP+V ++ I+P+YS LP + Q RIFE PP G+ RKVV
Sbjct: 359 QEEIDEACKRIKREVDDLGPEVGDIKIIPLYSTLPPQQQQRIFEPPPPKKQNGAIGRKVV 418
Query: 522 IATNIAETSLTIDGIFYVVDP 542
++TNIAETSLTIDG+ +V+DP
Sbjct: 419 VSTNIAETSLTIDGVVFVIDP 439
Score = 39 (18.8 bits), Expect = 1.1e-13, Sum P(2) = 1.1e-13
Identities = 7/33 (21%), Positives = 17/33 (51%)
Query: 15 FPLEPNLSKMLIMSVHLQCSDEVLTIVSMLSVQ 47
F ++P +K + + ++ ++T +S S Q
Sbjct: 435 FVIDPGFAKQKVYNPRIRVESLLVTAISKASAQ 467
>TAIR|locus:2065210 [details] [associations]
symbol:AT2G47250 species:3702 "Arabidopsis thaliana"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0003724 "RNA helicase activity"
evidence=ISS] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=ISM] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0009941 "chloroplast envelope" evidence=IDA]
[GO:0016020 "membrane" evidence=IDA] [GO:0005829 "cytosol"
evidence=RCA] InterPro:IPR001650 InterPro:IPR003593
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00382
SMART:SM00490 SMART:SM00847 GO:GO:0005524 GO:GO:0005634
EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0016020 GO:GO:0008380
GO:GO:0006397 GO:GO:0009941 GO:GO:0003676 EMBL:AC002337
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026 HOGENOM:HOG000175261
EMBL:AY128301 EMBL:BT004534 IPI:IPI00540033 PIR:H84912
RefSeq:NP_182247.1 UniGene:At.36388 ProteinModelPortal:O22899
SMR:O22899 PaxDb:O22899 PRIDE:O22899 EnsemblPlants:AT2G47250.1
GeneID:819338 KEGG:ath:AT2G47250 GeneFarm:1798 TAIR:At2g47250
InParanoid:O22899 KO:K12820 OMA:XEIDEAC PhylomeDB:O22899
ProtClustDB:CLSN2683587 Genevestigator:O22899 GermOnline:AT2G47250
Uniprot:O22899
Length = 729
Score = 451 (163.8 bits), Expect = 4.2e-42, P = 4.2e-42
Identities = 95/237 (40%), Positives = 142/237 (59%)
Query: 12 MAEFPLEPNLSKMLIMSVHLQCSDEVLTIVSMLSVQNVFYRPXXXXXXXXXXXXXFNQME 71
M+EFPL+P +SKMLI+S CS+E+L++ +MLSV N F RP F ++
Sbjct: 493 MSEFPLDPQMSKMLIVSPEFNCSNEILSVSAMLSVPNCFVRPREAQKAADEAKARFGHID 552
Query: 72 GDHITLLAVYNSWRNNKFSNAWCYENFVQIRTLKRAQDVRKQLLGIMDRHKLDVVSAGKN 131
GDH+TLL VY++++ N WC+ENFV R +K A +VR+QL+ IM R L + S N
Sbjct: 553 GDHLTLLNVYHAYKQNNEDPNWCFENFVNNRAMKSADNVRQQLVRIMSRFNLKMCSTDFN 612
Query: 132 T----VRVQKAVCSGFFRNAAKKDPQEGYRTLVDSQVVYIHPSSALFNRQPEWVIYHELV 187
+ V ++KA+ +G+F A + Y T+ D+QVV++HPS+ L + +PEWVIY+E V
Sbjct: 613 SRDYYVNIRKAMLAGYFMQVAHLERTGHYLTVKDNQVVHLHPSNCL-DHKPEWVIYNEYV 671
Query: 188 QTTKEYMREVTSIDPKWLVEFAPAFFKFSD-PT-----KLSKFKKNQRLEPLQRTNR 238
TT+ ++R VT I +WLV+ A ++ S+ P L K K + E + NR
Sbjct: 672 LTTRNFIRTVTDIRGEWLVDVAQHYYDLSNFPNCEAKRALEKLYKKREREKNESKNR 728
Score = 291 (107.5 bits), Expect = 3.2e-41, Sum P(2) = 3.2e-41
Identities = 57/116 (49%), Positives = 82/116 (70%)
Query: 216 SDPTKLSKFKKNQRLEPLQRTNRISFPPGLLKQAVKKRPEIKLIVTSATLDAVKFSSYFF 275
+DP L ++K E +RT GLLK+ ++ RP++KL+V SATL+A KF YF
Sbjct: 178 ADPL-LERYKVIILDEAHERTLATDVLFGLLKEVLRNRPDLKLVVMSATLEAEKFQEYFS 236
Query: 276 EAPIFTIPGRTFPVEVLYTKEPETDYLDASLITVMQIHLREPPGDVLLFLTGKLDV 331
AP+ +PGR PVE+ YT+EPE DYL+A++ TV+QIH+ EPPGD+L+FLTG+ ++
Sbjct: 237 GAPLMKVPGRLHPVEIFYTQEPERDYLEAAIRTVVQIHMCEPPGDILVFLTGEEEI 292
Score = 223 (83.6 bits), Expect = 3.2e-41, Sum P(2) = 3.2e-41
Identities = 53/138 (38%), Positives = 82/138 (59%)
Query: 330 DVRKQLLGIMDRHKLDVVSAGKNT----VRVQKAVCSGFFRNAAKKDPQEGYRTLVDSQV 385
+VR+QL+ IM R L + S N+ V ++KA+ +G+F A + Y T+ D+QV
Sbjct: 590 NVRQQLVRIMSRFNLKMCSTDFNSRDYYVNIRKAMLAGYFMQVAHLERTGHYLTVKDNQV 649
Query: 386 VYIHPSSALFNRQPEWVIYHELVQTTKEYMREVTSIDPKWLVEFAPAFFKFSDPTKLSKF 445
V++HPS+ L + +PEWVIY+E V TT+ ++R VT I +WLV+ A ++ S+
Sbjct: 650 VHLHPSNCL-DHKPEWVIYNEYVLTTRNFIRTVTDIRGEWLVDVAQHYYDLSN---FPNC 705
Query: 446 KKNQRLEPLYNKYE-EPN 462
+ + LE LY K E E N
Sbjct: 706 EAKRALEKLYKKREREKN 723
Score = 196 (74.1 bits), Expect = 2.2e-38, Sum P(2) = 2.2e-38
Identities = 40/81 (49%), Positives = 55/81 (67%)
Query: 469 EEIDTACEILYERMKSLGPDVPELIILPVYSALPSEMQTRIFEAAP-------PGSRKVV 521
EEI+ AC + + + +LG V + ++P+YS LP MQ +IF+ AP P RK+V
Sbjct: 290 EEIEDACRKINKEVSNLGDQVGPVKVVPLYSTLPPAMQQKIFDPAPVPLTEGGPAGRKIV 349
Query: 522 IATNIAETSLTIDGIFYVVDP 542
++TNIAETSLTIDGI YV+DP
Sbjct: 350 VSTNIAETSLTIDGIVYVIDP 370
>TAIR|locus:2095989 [details] [associations]
symbol:AT3G62310 species:3702 "Arabidopsis thaliana"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0003724 "RNA
helicase activity" evidence=ISS] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=ISM] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0005730 "nucleolus" evidence=IDA]
[GO:0005829 "cytosol" evidence=IDA] [GO:0009560 "embryo sac egg
cell differentiation" evidence=RCA] InterPro:IPR001650
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
GO:GO:0005829 GO:GO:0005524 EMBL:CP002686 GenomeReviews:BA000014_GR
GO:GO:0005730 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 HOGENOM:HOG000175261 EMBL:AL162507 KO:K12820
ProtClustDB:CLSN2683587 OMA:TVLQIHA EMBL:AY120782 EMBL:BT010331
IPI:IPI00540868 PIR:T48023 RefSeq:NP_191790.1 UniGene:At.34140
UniGene:At.4777 ProteinModelPortal:Q9LZQ9 SMR:Q9LZQ9 IntAct:Q9LZQ9
PaxDb:Q9LZQ9 PRIDE:Q9LZQ9 EnsemblPlants:AT3G62310.1 GeneID:825404
KEGG:ath:AT3G62310 TAIR:At3g62310 InParanoid:Q9LZQ9
PhylomeDB:Q9LZQ9 ArrayExpress:Q9LZQ9 Genevestigator:Q9LZQ9
Uniprot:Q9LZQ9
Length = 726
Score = 450 (163.5 bits), Expect = 5.3e-42, P = 5.3e-42
Identities = 93/238 (39%), Positives = 145/238 (60%)
Query: 12 MAEFPLEPNLSKMLIMSVHLQCSDEVLTIVSMLSVQNVFYRPXXXXXXXXXXXXXFNQME 71
M+EFPL+P ++KMLI+S CS+E+L++ +MLSV N F RP F +E
Sbjct: 489 MSEFPLDPQMAKMLIVSPEFNCSNEILSVSAMLSVPNCFIRPREAQKAADEAKARFGHIE 548
Query: 72 GDHITLLAVYNSWRNNKFSNAWCYENFVQIRTLKRAQDVRKQLLGIMDRHKLDVVSAGKN 131
GDH+TLL VY++++ N WCYENF+ R +K A +VR+QL+ IM R L + S N
Sbjct: 549 GDHLTLLNVYHAFKQNNEDPNWCYENFINNRAMKSADNVRQQLVRIMSRFNLKMCSTDFN 608
Query: 132 T----VRVQKAVCSGFFRNAAKKDPQEGYRTLVDSQVVYIHPSSALFNRQPEWVIYHELV 187
+ + ++KA+ +G+F A + Y T+ D+QVV++HPS+ L + +PEWVIY+E V
Sbjct: 609 SRDYYINIRKAMLAGYFMQVAHLERTGHYLTVKDNQVVHLHPSNCL-DHKPEWVIYNEYV 667
Query: 188 QTTKEYMREVTSIDPKWLVEFAPAFFKFSD-PTKLSK------FKKNQRLEPLQRTNR 238
T++ ++R VT I +WLV+ A ++ S+ P +K +KK +R + + NR
Sbjct: 668 LTSRNFIRTVTDIRGEWLVDVASHYYDLSNFPNCEAKRVIEKLYKKREREKEESKKNR 725
Score = 294 (108.6 bits), Expect = 1.6e-40, Sum P(2) = 1.6e-40
Identities = 58/116 (50%), Positives = 82/116 (70%)
Query: 216 SDPTKLSKFKKNQRLEPLQRTNRISFPPGLLKQAVKKRPEIKLIVTSATLDAVKFSSYFF 275
+DP L ++K E +RT GLLK+ +K RP++KL+V SATL+A KF YF
Sbjct: 174 ADPL-LERYKVIILDEAHERTLATDVLFGLLKEVLKNRPDLKLVVMSATLEAEKFQDYFS 232
Query: 276 EAPIFTIPGRTFPVEVLYTKEPETDYLDASLITVMQIHLREPPGDVLLFLTGKLDV 331
AP+ +PGR PVE+ YT+EPE DYL+A++ TV+QIH+ EPPGD+L+FLTG+ ++
Sbjct: 233 GAPLMKVPGRLHPVEIFYTQEPERDYLEAAIRTVVQIHMCEPPGDILVFLTGEEEI 288
Score = 213 (80.0 bits), Expect = 1.6e-40, Sum P(2) = 1.6e-40
Identities = 48/134 (35%), Positives = 80/134 (59%)
Query: 330 DVRKQLLGIMDRHKLDVVSAGKNT----VRVQKAVCSGFFRNAAKKDPQEGYRTLVDSQV 385
+VR+QL+ IM R L + S N+ + ++KA+ +G+F A + Y T+ D+QV
Sbjct: 586 NVRQQLVRIMSRFNLKMCSTDFNSRDYYINIRKAMLAGYFMQVAHLERTGHYLTVKDNQV 645
Query: 386 VYIHPSSALFNRQPEWVIYHELVQTTKEYMREVTSIDPKWLVEFAPAFFKFSDPTKLSKF 445
V++HPS+ L + +PEWVIY+E V T++ ++R VT I +WLV+ A ++ S+
Sbjct: 646 VHLHPSNCL-DHKPEWVIYNEYVLTSRNFIRTVTDIRGEWLVDVASHYYDLSN---FPNC 701
Query: 446 KKNQRLEPLYNKYE 459
+ + +E LY K E
Sbjct: 702 EAKRVIEKLYKKRE 715
Score = 193 (73.0 bits), Expect = 2.0e-38, Sum P(2) = 2.0e-38
Identities = 40/81 (49%), Positives = 55/81 (67%)
Query: 469 EEIDTACEILYERMKSLGPDVPELIILPVYSALPSEMQTRIFEAAP-------PGSRKVV 521
EEI+ AC + + + +LG V + ++P+YS LP MQ +IF+ AP P RK+V
Sbjct: 286 EEIEDACRKINKEVGNLGDQVGPIKVVPLYSTLPPAMQQKIFDPAPEPVTEGGPPGRKIV 345
Query: 522 IATNIAETSLTIDGIFYVVDP 542
++TNIAETSLTIDGI YV+DP
Sbjct: 346 VSTNIAETSLTIDGIVYVIDP 366
>UNIPROTKB|F1S3A8 [details] [associations]
symbol:DHX38 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0003676
"nucleic acid binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0003676 GO:GO:0071013 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
GeneTree:ENSGT00700000104877 EMBL:CU914723
Ensembl:ENSSSCT00000003045 OMA:IATIPEI Uniprot:F1S3A8
Length = 766
Score = 447 (162.4 bits), Expect = 1.5e-41, P = 1.5e-41
Identities = 88/220 (40%), Positives = 132/220 (60%)
Query: 12 MAEFPLEPNLSKMLIMSVHLQCSDEVLTIVSMLSVQNVFYRPXXXXXXXXXXXXXFNQME 71
M EFPL+P LSKMLI+S + CS E+L IVSMLSV +FYRP F E
Sbjct: 485 MVEFPLDPALSKMLIVSCDMGCSSEILLIVSMLSVPAIFYRPKGREEESDQIREKFAVPE 544
Query: 72 GDHITLLAVYNSWRNNKFSNAWCYENFVQIRTLKRAQDVRKQLLGIMDRHKLDVVSAGKN 131
DH+T L VY W+NN +S WC ++F+ + +++ ++VR QL IM + ++ + S G +
Sbjct: 545 SDHLTYLNVYLQWKNNNYSTIWCNDHFIHAKAMRKVREVRAQLKDIMVQQRMSLASCGTD 604
Query: 132 TVRVQKAVCSGFFRNAAKKDPQEGYRTLVDSQVVYIHPSSALFNR--QPEWVIYHELVQT 189
V+K +C+ +F AAK Y + ++HP+S+LF P++++YHELV T
Sbjct: 605 WDIVRKCICAAYFHQAAKLKGIGEYVNIRTGMPCHLHPTSSLFGMGYTPDYIVYHELVMT 664
Query: 190 TKEYMREVTSIDPKWLVEFAPAFFKFSDPTKLSKFKKNQR 229
TKEYM+ VT++D +WL E P F+ K S+ ++N+R
Sbjct: 665 TKEYMQCVTAVDGEWLAELGPMFYSVKQAGK-SR-QENRR 702
Score = 264 (98.0 bits), Expect = 1.7e-37, Sum P(2) = 1.7e-37
Identities = 46/88 (52%), Positives = 70/88 (79%)
Query: 244 GLLKQAVKKRPEIKLIVTSATLDAVKFSSYFFEAPIFTIPGRTFPVEVLYTKEPETDYLD 303
GLL++ V +R ++KLIVTSAT+DA KF+S+F PIF IPGRTFPV++L++K P+ DY++
Sbjct: 205 GLLREVVARRSDLKLIVTSATMDAEKFASFFGNVPIFHIPGRTFPVDILFSKTPQEDYVE 264
Query: 304 ASLITVMQIHLREPPGDVLLFLTGKLDV 331
A++ +Q+HL PGD+L+F+ G+ D+
Sbjct: 265 AAVKQSLQVHLSGAPGDILIFMPGQEDI 292
Score = 218 (81.8 bits), Expect = 1.7e-37, Sum P(2) = 1.7e-37
Identities = 48/144 (33%), Positives = 81/144 (56%)
Query: 330 DVRKQLLGIMDRHKLDVVSAGKNTVRVQKAVCSGFFRNAAKKDPQEGYRTLVDSQVVYIH 389
+VR QL IM + ++ + S G + V+K +C+ +F AAK Y + ++H
Sbjct: 582 EVRAQLKDIMVQQRMSLASCGTDWDIVRKCICAAYFHQAAKLKGIGEYVNIRTGMPCHLH 641
Query: 390 PSSALFNR--QPEWVIYHELVQTTKEYMREVTSIDPKWLVEFAPAFFKFSDPTKLSKFKK 447
P+S+LF P++++YHELV TTKEYM+ VT++D +WL E P F+ K S+ +
Sbjct: 642 PTSSLFGMGYTPDYIVYHELVMTTKEYMQCVTAVDGEWLAELGPMFYSVKQAGK-SRQEN 700
Query: 448 NQRLEPLYNKYEEPNAWRISREEI 471
+R + + EE A ++ E++
Sbjct: 701 RRRAKEEASAMEEEMA--LAEEQL 722
Score = 199 (75.1 bits), Expect = 1.6e-35, Sum P(2) = 1.6e-35
Identities = 36/74 (48%), Positives = 55/74 (74%)
Query: 468 REEIDTACEILYERMKSLGPDVPELIILPVYSALPSEMQTRIFEAAPPGSRKVVIATNIA 527
+E+I+ + + E ++ L + P L +LP+YS LPS++Q +IF+ AP G RK ++ATNIA
Sbjct: 289 QEDIEVTSDQIVEHLEEL-ENAPALAVLPIYSQLPSDLQAKIFQKAPDGVRKCIVATNIA 347
Query: 528 ETSLTIDGIFYVVD 541
ETSLT+DGI +V+D
Sbjct: 348 ETSLTVDGIMFVID 361
Score = 38 (18.4 bits), Expect = 1.6e-13, Sum P(2) = 1.6e-13
Identities = 9/23 (39%), Positives = 11/23 (47%)
Query: 150 KDPQEGYRTLVDSQVVYIHPSSA 172
K PQE Y Q + +H S A
Sbjct: 256 KTPQEDYVEAAVKQSLQVHLSGA 278
Score = 38 (18.4 bits), Expect = 2.0e-11, Sum P(2) = 2.0e-11
Identities = 9/23 (39%), Positives = 11/23 (47%)
Query: 371 KDPQEGYRTLVDSQVVYIHPSSA 393
K PQE Y Q + +H S A
Sbjct: 256 KTPQEDYVEAAVKQSLQVHLSGA 278
>UNIPROTKB|E1C094 [details] [associations]
symbol:E1C094 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
GeneTree:ENSGT00700000104421 EMBL:AADN02054197 EMBL:AADN02054196
IPI:IPI00591998 Ensembl:ENSGALT00000001141 Uniprot:E1C094
Length = 1164
Score = 452 (164.2 bits), Expect = 1.5e-41, P = 1.5e-41
Identities = 89/221 (40%), Positives = 133/221 (60%)
Query: 11 QMAEFPLEPNLSKMLIMSVHLQCSDEVLTIVSMLSVQNVFYRPXXXXXXXXXXXXXFNQM 70
QM EFPL+P LSKMLI+S + CS E+L IVSMLSV +FYRP F
Sbjct: 882 QMVEFPLDPALSKMLIVSCDMGCSSEILLIVSMLSVPAIFYRPKGREEESDQVREKFAVP 941
Query: 71 EGDHITLLAVYNSWRNNKFSNAWCYENFVQIRTLKRAQDVRKQLLGIMDRHKLDVVSAGK 130
E DH+T L VY W+NN +S WC ++F+ + +++ ++VR QL IM + ++ + S G
Sbjct: 942 ESDHLTYLNVYLQWKNNNYSTLWCNQHFIHAKAMRKVREVRAQLKDIMVQQRMSLASCGT 1001
Query: 131 NTVRVQKAVCSGFFRNAAKKDPQEGYRTLVDSQVVYIHPSSALFNR--QPEWVIYHELVQ 188
+ V+K +C+ +F AAK Y + ++HP+S+LF P++++YHELV
Sbjct: 1002 DWDVVRKCICAAYFHQAAKLKGIGEYVNIRTGMPCHLHPTSSLFGMGYTPDYIVYHELVM 1061
Query: 189 TTKEYMREVTSIDPKWLVEFAPAFFKFSDPTKLSKFKKNQR 229
TTKEYM+ VT++D +WL E P F+ K S+ ++N+R
Sbjct: 1062 TTKEYMQCVTAVDGEWLAELGPMFYSIKHAGK-SR-QENRR 1100
Score = 263 (97.6 bits), Expect = 2.0e-36, Sum P(3) = 2.0e-36
Identities = 45/88 (51%), Positives = 70/88 (79%)
Query: 244 GLLKQAVKKRPEIKLIVTSATLDAVKFSSYFFEAPIFTIPGRTFPVEVLYTKEPETDYLD 303
GLL++ V +R ++KL+VTSAT+DA KF+S+F PIF IPGRTFPV++L++K P+ DY++
Sbjct: 669 GLLREVVARRSDLKLVVTSATMDADKFASFFGNVPIFHIPGRTFPVDILFSKTPQEDYVE 728
Query: 304 ASLITVMQIHLREPPGDVLLFLTGKLDV 331
A++ +Q+HL PGD+L+F+ G+ D+
Sbjct: 729 AAVKQALQVHLSGAPGDILVFMPGQEDI 756
Score = 222 (83.2 bits), Expect = 2.0e-36, Sum P(3) = 2.0e-36
Identities = 53/159 (33%), Positives = 86/159 (54%)
Query: 330 DVRKQLLGIMDRHKLDVVSAGKNTVRVQKAVCSGFFRNAAKKDPQEGYRTLVDSQVVYIH 389
+VR QL IM + ++ + S G + V+K +C+ +F AAK Y + ++H
Sbjct: 980 EVRAQLKDIMVQQRMSLASCGTDWDVVRKCICAAYFHQAAKLKGIGEYVNIRTGMPCHLH 1039
Query: 390 PSSALFNR--QPEWVIYHELVQTTKEYMREVTSIDPKWLVEFAPAFFKFSDPTKLSKFKK 447
P+S+LF P++++YHELV TTKEYM+ VT++D +WL E P F+ K S+ +
Sbjct: 1040 PTSSLFGMGYTPDYIVYHELVMTTKEYMQCVTAVDGEWLAELGPMFYSIKHAGK-SRQEN 1098
Query: 448 NQRLEPLYNKYEEPNAWRISREEIDTACEILYERMKSLG 486
+R + + EE A ++ E++ E ER LG
Sbjct: 1099 RRRAKEEASAMEEEMA--LAEEQLRARREE-QERRNPLG 1134
Score = 200 (75.5 bits), Expect = 3.9e-34, Sum P(3) = 3.9e-34
Identities = 37/74 (50%), Positives = 54/74 (72%)
Query: 468 REEIDTACEILYERMKSLGPDVPELIILPVYSALPSEMQTRIFEAAPPGSRKVVIATNIA 527
+E+I+ E + E ++ L P L +LP+YS LPS++Q +IF+ AP G RK ++ATNIA
Sbjct: 753 QEDIEVTSEQIVEHLEEL-EKAPALAVLPIYSQLPSDLQAKIFQKAPDGVRKCIVATNIA 811
Query: 528 ETSLTIDGIFYVVD 541
ETSLT+DGI +V+D
Sbjct: 812 ETSLTVDGIMFVID 825
Score = 40 (19.1 bits), Expect = 1.2e-13, Sum P(2) = 1.2e-13
Identities = 9/23 (39%), Positives = 11/23 (47%)
Query: 150 KDPQEGYRTLVDSQVVYIHPSSA 172
K PQE Y Q + +H S A
Sbjct: 720 KTPQEDYVEAAVKQALQVHLSGA 742
Score = 40 (19.1 bits), Expect = 1.3e-10, Sum P(3) = 1.3e-10
Identities = 9/23 (39%), Positives = 11/23 (47%)
Query: 371 KDPQEGYRTLVDSQVVYIHPSSA 393
K PQE Y Q + +H S A
Sbjct: 720 KTPQEDYVEAAVKQALQVHLSGA 742
Score = 37 (18.1 bits), Expect = 2.0e-36, Sum P(3) = 2.0e-36
Identities = 10/33 (30%), Positives = 18/33 (54%)
Query: 123 LDVVSAGKNTVRVQKAVCSGFFRNAAKKDPQEG 155
LDV++A K R ++ R ++ +D +EG
Sbjct: 50 LDVLAAQKRREREEEGTSGKRSRVSSYRDWEEG 82
Score = 37 (18.1 bits), Expect = 6.2e-11, Sum P(2) = 6.2e-11
Identities = 10/33 (30%), Positives = 18/33 (54%)
Query: 344 LDVVSAGKNTVRVQKAVCSGFFRNAAKKDPQEG 376
LDV++A K R ++ R ++ +D +EG
Sbjct: 50 LDVLAAQKRREREEEGTSGKRSRVSSYRDWEEG 82
>UNIPROTKB|F1NY80 [details] [associations]
symbol:F1NY80 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0071013 "catalytic step
2 spliceosome" evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 GO:GO:0005524 GO:GO:0003676 GO:GO:0071013
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 GeneTree:ENSGT00700000104421 OMA:PSRSTWE
EMBL:AADN02054197 EMBL:AADN02054196 IPI:IPI00821409
Ensembl:ENSGALT00000038723 Uniprot:F1NY80
Length = 1170
Score = 452 (164.2 bits), Expect = 1.6e-41, P = 1.6e-41
Identities = 89/221 (40%), Positives = 133/221 (60%)
Query: 11 QMAEFPLEPNLSKMLIMSVHLQCSDEVLTIVSMLSVQNVFYRPXXXXXXXXXXXXXFNQM 70
QM EFPL+P LSKMLI+S + CS E+L IVSMLSV +FYRP F
Sbjct: 888 QMVEFPLDPALSKMLIVSCDMGCSSEILLIVSMLSVPAIFYRPKGREEESDQVREKFAVP 947
Query: 71 EGDHITLLAVYNSWRNNKFSNAWCYENFVQIRTLKRAQDVRKQLLGIMDRHKLDVVSAGK 130
E DH+T L VY W+NN +S WC ++F+ + +++ ++VR QL IM + ++ + S G
Sbjct: 948 ESDHLTYLNVYLQWKNNNYSTLWCNQHFIHAKAMRKVREVRAQLKDIMVQQRMSLASCGT 1007
Query: 131 NTVRVQKAVCSGFFRNAAKKDPQEGYRTLVDSQVVYIHPSSALFNR--QPEWVIYHELVQ 188
+ V+K +C+ +F AAK Y + ++HP+S+LF P++++YHELV
Sbjct: 1008 DWDVVRKCICAAYFHQAAKLKGIGEYVNIRTGMPCHLHPTSSLFGMGYTPDYIVYHELVM 1067
Query: 189 TTKEYMREVTSIDPKWLVEFAPAFFKFSDPTKLSKFKKNQR 229
TTKEYM+ VT++D +WL E P F+ K S+ ++N+R
Sbjct: 1068 TTKEYMQCVTAVDGEWLAELGPMFYSIKHAGK-SR-QENRR 1106
Score = 263 (97.6 bits), Expect = 2.1e-36, Sum P(3) = 2.1e-36
Identities = 45/88 (51%), Positives = 70/88 (79%)
Query: 244 GLLKQAVKKRPEIKLIVTSATLDAVKFSSYFFEAPIFTIPGRTFPVEVLYTKEPETDYLD 303
GLL++ V +R ++KL+VTSAT+DA KF+S+F PIF IPGRTFPV++L++K P+ DY++
Sbjct: 672 GLLREVVARRSDLKLVVTSATMDADKFASFFGNVPIFHIPGRTFPVDILFSKTPQEDYVE 731
Query: 304 ASLITVMQIHLREPPGDVLLFLTGKLDV 331
A++ +Q+HL PGD+L+F+ G+ D+
Sbjct: 732 AAVKQALQVHLSGAPGDILVFMPGQEDI 759
Score = 222 (83.2 bits), Expect = 2.1e-36, Sum P(3) = 2.1e-36
Identities = 53/159 (33%), Positives = 86/159 (54%)
Query: 330 DVRKQLLGIMDRHKLDVVSAGKNTVRVQKAVCSGFFRNAAKKDPQEGYRTLVDSQVVYIH 389
+VR QL IM + ++ + S G + V+K +C+ +F AAK Y + ++H
Sbjct: 986 EVRAQLKDIMVQQRMSLASCGTDWDVVRKCICAAYFHQAAKLKGIGEYVNIRTGMPCHLH 1045
Query: 390 PSSALFNR--QPEWVIYHELVQTTKEYMREVTSIDPKWLVEFAPAFFKFSDPTKLSKFKK 447
P+S+LF P++++YHELV TTKEYM+ VT++D +WL E P F+ K S+ +
Sbjct: 1046 PTSSLFGMGYTPDYIVYHELVMTTKEYMQCVTAVDGEWLAELGPMFYSIKHAGK-SRQEN 1104
Query: 448 NQRLEPLYNKYEEPNAWRISREEIDTACEILYERMKSLG 486
+R + + EE A ++ E++ E ER LG
Sbjct: 1105 RRRAKEEASAMEEEMA--LAEEQLRARREE-QERRNPLG 1140
Score = 200 (75.5 bits), Expect = 4.0e-34, Sum P(3) = 4.0e-34
Identities = 37/74 (50%), Positives = 54/74 (72%)
Query: 468 REEIDTACEILYERMKSLGPDVPELIILPVYSALPSEMQTRIFEAAPPGSRKVVIATNIA 527
+E+I+ E + E ++ L P L +LP+YS LPS++Q +IF+ AP G RK ++ATNIA
Sbjct: 756 QEDIEVTSEQIVEHLEEL-EKAPALAVLPIYSQLPSDLQAKIFQKAPDGVRKCIVATNIA 814
Query: 528 ETSLTIDGIFYVVD 541
ETSLT+DGI +V+D
Sbjct: 815 ETSLTVDGIMFVID 828
Score = 40 (19.1 bits), Expect = 1.2e-13, Sum P(2) = 1.2e-13
Identities = 9/23 (39%), Positives = 11/23 (47%)
Query: 150 KDPQEGYRTLVDSQVVYIHPSSA 172
K PQE Y Q + +H S A
Sbjct: 723 KTPQEDYVEAAVKQALQVHLSGA 745
Score = 40 (19.1 bits), Expect = 1.3e-10, Sum P(3) = 1.3e-10
Identities = 9/23 (39%), Positives = 11/23 (47%)
Query: 371 KDPQEGYRTLVDSQVVYIHPSSA 393
K PQE Y Q + +H S A
Sbjct: 723 KTPQEDYVEAAVKQALQVHLSGA 745
Score = 37 (18.1 bits), Expect = 2.1e-36, Sum P(3) = 2.1e-36
Identities = 10/33 (30%), Positives = 18/33 (54%)
Query: 123 LDVVSAGKNTVRVQKAVCSGFFRNAAKKDPQEG 155
LDV++A K R ++ R ++ +D +EG
Sbjct: 53 LDVLAAQKRREREEEGTSGKRSRVSSYRDWEEG 85
Score = 37 (18.1 bits), Expect = 6.2e-11, Sum P(2) = 6.2e-11
Identities = 10/33 (30%), Positives = 18/33 (54%)
Query: 344 LDVVSAGKNTVRVQKAVCSGFFRNAAKKDPQEG 376
LDV++A K R ++ R ++ +D +EG
Sbjct: 53 LDVLAAQKRREREEEGTSGKRSRVSSYRDWEEG 85
>POMBASE|SPBC1711.17 [details] [associations]
symbol:prp16 "ATP-dependent RNA helicase Prp16
(predicted)" species:4896 "Schizosaccharomyces pombe" [GO:0000350
"generation of catalytic spliceosome for second transesterification
step" evidence=ISO] [GO:0004004 "ATP-dependent RNA helicase
activity" evidence=ISO] [GO:0005524 "ATP binding" evidence=IC]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005681 "spliceosomal
complex" evidence=ISO] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 PomBase:SPBC1711.17 GO:GO:0005524 EMBL:CU329671
GenomeReviews:CU329671_GR GO:GO:0005681 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643
InterPro:IPR011709 Pfam:PF07717 GO:GO:0004004 HOGENOM:HOG000175261
KO:K12815 GO:GO:0000350 OMA:PSRSTWE PIR:T39724 RefSeq:NP_595890.2
ProteinModelPortal:Q9P774 IntAct:Q9P774 EnsemblFungi:SPBC1711.17.1
GeneID:2540006 KEGG:spo:SPBC1711.17 OrthoDB:EOG4GQTD2
NextBio:20801149 Uniprot:Q9P774
Length = 1173
Score = 441 (160.3 bits), Expect = 1.7e-41, Sum P(2) = 1.7e-41
Identities = 84/209 (40%), Positives = 132/209 (63%)
Query: 11 QMAEFPLEPNLSKMLIMSVHLQCSDEVLTIVSMLSVQNVFYRPXXXXXXXXXXXXXFNQM 70
+M+ FP++P+LSK++I++ +C++E++TIVSMLSV +VFYRP FN
Sbjct: 905 KMSLFPMDPSLSKLIIIAEDYKCTEEIITIVSMLSVPSVFYRPKERAEESDAAREKFNVP 964
Query: 71 EGDHITLLAVYNSWRNNKFSNAWCYENFVQIRTLKRAQDVRKQLLGIMDRHKLDVVSAGK 130
E DH+ LL +Y W+ N +SN+WC ++F+ +TLKRA+D+R+QL+ IM + K+ + S
Sbjct: 965 ESDHLMLLNIYQHWQRNGYSNSWCSKHFLHSKTLKRARDIRQQLVEIMSKQKISLESVSD 1024
Query: 131 NTVRVQKAVCSGFFRNAAKKDPQEGYRTLVDSQVVYIHPSSALFNRQ--PEWVIYHELVQ 188
+ V++ +CS +F AA Y L ++H +S+L+ P++VIYHELV
Sbjct: 1025 WDI-VRRVLCSAYFHQAACAKGIGEYVHLRSGMPCHLHVTSSLYGLGYLPDYVIYHELVL 1083
Query: 189 TTKEYMREVTSIDPKWLVEFAPAFFKFSD 217
T+KEYM VTS+DP WL EF ++ +
Sbjct: 1084 TSKEYMNIVTSVDPYWLAEFGGVYYSVKE 1112
Score = 266 (98.7 bits), Expect = 1.2e-37, Sum P(2) = 1.2e-37
Identities = 49/98 (50%), Positives = 75/98 (76%)
Query: 244 GLLKQAVKKRPEIKLIVTSATLDAVKFSSYFFEAPIFTIPGRTFPVEVLYTKEPETDYLD 303
GLLK+ + +R +IKL+VTSAT+++ KFS +F AP FTIPGRT+PV++++ K P +DY++
Sbjct: 626 GLLKKVLSRRRDIKLLVTSATMNSQKFSDFFGGAPQFTIPGRTYPVDIMFAKAPCSDYVE 685
Query: 304 ASLITVMQIHLREPPGDVLLFLTGKLDVRKQLLGIMDR 341
A++ V+QIHL +P GD+L+F+TG+ D+ I DR
Sbjct: 686 AAVRQVLQIHLSQPAGDILVFMTGQEDIEATCEIIADR 723
Score = 223 (83.6 bits), Expect = 1.2e-37, Sum P(2) = 1.2e-37
Identities = 42/74 (56%), Positives = 58/74 (78%)
Query: 468 REEIDTACEILYERMKSLGPDVPELIILPVYSALPSEMQTRIFEAAPPGSRKVVIATNIA 527
+E+I+ CEI+ +R+ L D P L ILP+YS +P+++Q +IF++A PG RKVV+ATNIA
Sbjct: 710 QEDIEATCEIIADRLNQLH-DAPRLSILPIYSQMPADLQAKIFDSAEPGVRKVVVATNIA 768
Query: 528 ETSLTIDGIFYVVD 541
ETSLT+ GI YVVD
Sbjct: 769 ETSLTVHGISYVVD 782
Score = 192 (72.6 bits), Expect = 2.1e-34, Sum P(2) = 2.1e-34
Identities = 41/111 (36%), Positives = 64/111 (57%)
Query: 330 DVRKQLLGIMDRHKLDVVSAGKNTVRVQKAVCSGFFRNAAKKDPQEGYRTLVDSQVVYIH 389
D+R+QL+ IM + K+ + S + V++ +CS +F AA Y L ++H
Sbjct: 1003 DIRQQLVEIMSKQKISLESVSDWDI-VRRVLCSAYFHQAACAKGIGEYVHLRSGMPCHLH 1061
Query: 390 PSSALFNRQ--PEWVIYHELVQTTKEYMREVTSIDPKWLVEFAPAFFKFSD 438
+S+L+ P++VIYHELV T+KEYM VTS+DP WL EF ++ +
Sbjct: 1062 VTSSLYGLGYLPDYVIYHELVLTSKEYMNIVTSVDPYWLAEFGGVYYSVKE 1112
Score = 39 (18.8 bits), Expect = 1.7e-41, Sum P(2) = 1.7e-41
Identities = 8/11 (72%), Positives = 10/11 (90%)
Query: 1 MDSLVVTPISQ 11
+D+L VTPISQ
Sbjct: 797 IDTLQVTPISQ 807
>GENEDB_PFALCIPARUM|MAL13P1.322 [details] [associations]
symbol:MAL13P1.322 "splicing factor,
putative" species:5833 "Plasmodium falciparum" [GO:0000398 "mRNA
splicing, via spliceosome" evidence=ISS] [GO:0004004 "ATP-dependent
RNA helicase activity" evidence=ISS] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0003676 GO:GO:0000398 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717 GO:GO:0004004
EMBL:AL844509 HOGENOM:HOG000175261 KO:K12815 RefSeq:XP_002809102.1
ProteinModelPortal:C0H5K5 EnsemblProtists:MAL13P1.322:mRNA
GeneID:813888 KEGG:pfa:MAL13P1.322 EuPathDB:PlasmoDB:PF3D7_1364300
OMA:YFHNAAK ProtClustDB:CLSZ2500787 Uniprot:C0H5K5
Length = 1151
Score = 436 (158.5 bits), Expect = 4.2e-41, Sum P(2) = 4.2e-41
Identities = 84/205 (40%), Positives = 125/205 (60%)
Query: 11 QMAEFPLEPNLSKMLIMSVHLQCSDEVLTIVSMLSVQNVFYRPXXXXXXXXXXXXXFNQM 70
+M +FPL+P LSK++I S + QC+ E+L IVSMLS ++F F
Sbjct: 942 KMVQFPLDPPLSKIVIYSQNFQCTKEILIIVSMLSSPSIFLESKENNESIESKKEKFTVP 1001
Query: 71 EGDHITLLAVYNSWRNNKFSNAWCYENFVQIRTLKRAQDVRKQLLGIMDRHKLDVVSAGK 130
E DH+TLL +Y WR++ +S +WC +NF+Q + L +A++V QL+ I+ + VS
Sbjct: 1002 ESDHLTLLNIYLQWRSHNYSYSWCTKNFIQYKALNKAKEVYSQLIDIIKTLNIKNVSCDN 1061
Query: 131 NTVRVQKAVCSGFFRNAAKKDPQEGYRTLVDSQVVYIHPSSALFN--RQPEWVIYHELVQ 188
++K +CSG+F NAAK Y L + ++HP+S+L+N P++VIY E+V
Sbjct: 1062 KWELIRKTICSGYFHNAAKLKSFSEYINLRTNVSCHVHPNSSLYNIGYTPDYVIYQEIVF 1121
Query: 189 TTKEYMREVTSIDPKWLVEFAPAFF 213
TTKEYMR VT++DP+WL E P FF
Sbjct: 1122 TTKEYMRNVTTVDPEWLCELGPLFF 1146
Score = 223 (83.6 bits), Expect = 2.1e-31, Sum P(2) = 2.1e-31
Identities = 45/107 (42%), Positives = 65/107 (60%)
Query: 330 DVRKQLLGIMDRHKLDVVSAGKNTVRVQKAVCSGFFRNAAKKDPQEGYRTLVDSQVVYIH 389
+V QL+ I+ + VS ++K +CSG+F NAAK Y L + ++H
Sbjct: 1040 EVYSQLIDIIKTLNIKNVSCDNKWELIRKTICSGYFHNAAKLKSFSEYINLRTNVSCHVH 1099
Query: 390 PSSALFN--RQPEWVIYHELVQTTKEYMREVTSIDPKWLVEFAPAFF 434
P+S+L+N P++VIY E+V TTKEYMR VT++DP+WL E P FF
Sbjct: 1100 PNSSLYNIGYTPDYVIYQEIVFTTKEYMRNVTTVDPEWLCELGPLFF 1146
Score = 209 (78.6 bits), Expect = 2.1e-31, Sum P(2) = 2.1e-31
Identities = 42/93 (45%), Positives = 63/93 (67%)
Query: 244 GLLKQAVKKRPEIKLIVTSATLDAVKFSSYFFEAPIFTIPGRTFPVEVLYTKEPETDYLD 303
G+LK KR ++KLIVTSAT+DA KFS++F API+ I GRTF V + Y + P DY++
Sbjct: 613 GILKNICLKRNDLKLIVTSATIDAKKFSAFFGNAPIYNIQGRTFKVHIEYLRTPCNDYIE 672
Query: 304 ASLITVMQIHLREPP-----GDVLLFLTGKLDV 331
++ +QIH+ + GD+L+F+TG+ D+
Sbjct: 673 CAVQKAIQIHVSDNNYDNNFGDILIFMTGQEDI 705
Score = 135 (52.6 bits), Expect = 4.0e-22, Sum P(2) = 4.0e-22
Identities = 27/48 (56%), Positives = 37/48 (77%)
Query: 494 ILPVYSALPSEMQTRIFEAAPPGSRKVVIATNIAETSLTIDGIFYVVD 541
I P+YS L SE Q++IF+ RK++++TNIAETSLT+DGI YV+D
Sbjct: 774 IFPIYSQLSSEQQSKIFKKYD--LRKIIVSTNIAETSLTLDGIKYVID 819
Score = 43 (20.2 bits), Expect = 0.00014, Sum P(2) = 0.00014
Identities = 27/138 (19%), Positives = 52/138 (37%)
Query: 281 TIPGRTFPVEVLYTKEPETDYLDASLIT-VMQIHLREPPGDVLLFLTGKLDVRKQLLGI- 338
T P R V V Y E + SL+ ++ + ++T + +R+ L
Sbjct: 530 TQPRRVAAVSVAYRVSYEMNVDIGSLVGYTIRFEDNTTKDTKIRYVTDGILLRETLNDKE 589
Query: 339 MDRHKLDVVSAGKNTVRVQKAVCSGFFRNAAKKDPQEGYRTLVDSQVVYIHPSSALFNRQ 398
+D++ + ++ + V G +N K + + +V S + SA F
Sbjct: 590 LDKYSVIIMDEAHER-SINTDVLLGILKNICLK--RNDLKLIVTSATIDAKKFSAFFGNA 646
Query: 399 PEWVIYHELVQTTKEYMR 416
P + I + EY+R
Sbjct: 647 PIYNIQGRTFKVHIEYLR 664
Score = 40 (19.1 bits), Expect = 4.2e-41, Sum P(2) = 4.2e-41
Identities = 9/11 (81%), Positives = 9/11 (81%)
Query: 1 MDSLVVTPISQ 11
MD L VTPISQ
Sbjct: 834 MDVLQVTPISQ 844
Score = 40 (19.1 bits), Expect = 8.9e-14, Sum P(2) = 8.9e-14
Identities = 15/78 (19%), Positives = 30/78 (38%)
Query: 118 MDRHKLDVVSAGKNTVRVQKAVCSGFFRNAAKKDPQEGYRTLVDSQVVYIHPSSALFNRQ 177
+D++ + ++ + V G +N K + + +V S + SA F
Sbjct: 590 LDKYSVIIMDEAHER-SINTDVLLGILKNICLK--RNDLKLIVTSATIDAKKFSAFFGNA 646
Query: 178 PEWVIYHELVQTTKEYMR 195
P + I + EY+R
Sbjct: 647 PIYNIQGRTFKVHIEYLR 664
>UNIPROTKB|C0H5K5 [details] [associations]
symbol:MAL13P1.322 "Splicing factor, putative"
species:36329 "Plasmodium falciparum 3D7" [GO:0000398 "mRNA
splicing, via spliceosome" evidence=ISS] [GO:0004004 "ATP-dependent
RNA helicase activity" evidence=ISS] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0003676 GO:GO:0000398 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717 GO:GO:0004004
EMBL:AL844509 HOGENOM:HOG000175261 KO:K12815 RefSeq:XP_002809102.1
ProteinModelPortal:C0H5K5 EnsemblProtists:MAL13P1.322:mRNA
GeneID:813888 KEGG:pfa:MAL13P1.322 EuPathDB:PlasmoDB:PF3D7_1364300
OMA:YFHNAAK ProtClustDB:CLSZ2500787 Uniprot:C0H5K5
Length = 1151
Score = 436 (158.5 bits), Expect = 4.2e-41, Sum P(2) = 4.2e-41
Identities = 84/205 (40%), Positives = 125/205 (60%)
Query: 11 QMAEFPLEPNLSKMLIMSVHLQCSDEVLTIVSMLSVQNVFYRPXXXXXXXXXXXXXFNQM 70
+M +FPL+P LSK++I S + QC+ E+L IVSMLS ++F F
Sbjct: 942 KMVQFPLDPPLSKIVIYSQNFQCTKEILIIVSMLSSPSIFLESKENNESIESKKEKFTVP 1001
Query: 71 EGDHITLLAVYNSWRNNKFSNAWCYENFVQIRTLKRAQDVRKQLLGIMDRHKLDVVSAGK 130
E DH+TLL +Y WR++ +S +WC +NF+Q + L +A++V QL+ I+ + VS
Sbjct: 1002 ESDHLTLLNIYLQWRSHNYSYSWCTKNFIQYKALNKAKEVYSQLIDIIKTLNIKNVSCDN 1061
Query: 131 NTVRVQKAVCSGFFRNAAKKDPQEGYRTLVDSQVVYIHPSSALFN--RQPEWVIYHELVQ 188
++K +CSG+F NAAK Y L + ++HP+S+L+N P++VIY E+V
Sbjct: 1062 KWELIRKTICSGYFHNAAKLKSFSEYINLRTNVSCHVHPNSSLYNIGYTPDYVIYQEIVF 1121
Query: 189 TTKEYMREVTSIDPKWLVEFAPAFF 213
TTKEYMR VT++DP+WL E P FF
Sbjct: 1122 TTKEYMRNVTTVDPEWLCELGPLFF 1146
Score = 223 (83.6 bits), Expect = 2.1e-31, Sum P(2) = 2.1e-31
Identities = 45/107 (42%), Positives = 65/107 (60%)
Query: 330 DVRKQLLGIMDRHKLDVVSAGKNTVRVQKAVCSGFFRNAAKKDPQEGYRTLVDSQVVYIH 389
+V QL+ I+ + VS ++K +CSG+F NAAK Y L + ++H
Sbjct: 1040 EVYSQLIDIIKTLNIKNVSCDNKWELIRKTICSGYFHNAAKLKSFSEYINLRTNVSCHVH 1099
Query: 390 PSSALFN--RQPEWVIYHELVQTTKEYMREVTSIDPKWLVEFAPAFF 434
P+S+L+N P++VIY E+V TTKEYMR VT++DP+WL E P FF
Sbjct: 1100 PNSSLYNIGYTPDYVIYQEIVFTTKEYMRNVTTVDPEWLCELGPLFF 1146
Score = 209 (78.6 bits), Expect = 2.1e-31, Sum P(2) = 2.1e-31
Identities = 42/93 (45%), Positives = 63/93 (67%)
Query: 244 GLLKQAVKKRPEIKLIVTSATLDAVKFSSYFFEAPIFTIPGRTFPVEVLYTKEPETDYLD 303
G+LK KR ++KLIVTSAT+DA KFS++F API+ I GRTF V + Y + P DY++
Sbjct: 613 GILKNICLKRNDLKLIVTSATIDAKKFSAFFGNAPIYNIQGRTFKVHIEYLRTPCNDYIE 672
Query: 304 ASLITVMQIHLREPP-----GDVLLFLTGKLDV 331
++ +QIH+ + GD+L+F+TG+ D+
Sbjct: 673 CAVQKAIQIHVSDNNYDNNFGDILIFMTGQEDI 705
Score = 135 (52.6 bits), Expect = 4.0e-22, Sum P(2) = 4.0e-22
Identities = 27/48 (56%), Positives = 37/48 (77%)
Query: 494 ILPVYSALPSEMQTRIFEAAPPGSRKVVIATNIAETSLTIDGIFYVVD 541
I P+YS L SE Q++IF+ RK++++TNIAETSLT+DGI YV+D
Sbjct: 774 IFPIYSQLSSEQQSKIFKKYD--LRKIIVSTNIAETSLTLDGIKYVID 819
Score = 43 (20.2 bits), Expect = 0.00014, Sum P(2) = 0.00014
Identities = 27/138 (19%), Positives = 52/138 (37%)
Query: 281 TIPGRTFPVEVLYTKEPETDYLDASLIT-VMQIHLREPPGDVLLFLTGKLDVRKQLLGI- 338
T P R V V Y E + SL+ ++ + ++T + +R+ L
Sbjct: 530 TQPRRVAAVSVAYRVSYEMNVDIGSLVGYTIRFEDNTTKDTKIRYVTDGILLRETLNDKE 589
Query: 339 MDRHKLDVVSAGKNTVRVQKAVCSGFFRNAAKKDPQEGYRTLVDSQVVYIHPSSALFNRQ 398
+D++ + ++ + V G +N K + + +V S + SA F
Sbjct: 590 LDKYSVIIMDEAHER-SINTDVLLGILKNICLK--RNDLKLIVTSATIDAKKFSAFFGNA 646
Query: 399 PEWVIYHELVQTTKEYMR 416
P + I + EY+R
Sbjct: 647 PIYNIQGRTFKVHIEYLR 664
Score = 40 (19.1 bits), Expect = 4.2e-41, Sum P(2) = 4.2e-41
Identities = 9/11 (81%), Positives = 9/11 (81%)
Query: 1 MDSLVVTPISQ 11
MD L VTPISQ
Sbjct: 834 MDVLQVTPISQ 844
Score = 40 (19.1 bits), Expect = 8.9e-14, Sum P(2) = 8.9e-14
Identities = 15/78 (19%), Positives = 30/78 (38%)
Query: 118 MDRHKLDVVSAGKNTVRVQKAVCSGFFRNAAKKDPQEGYRTLVDSQVVYIHPSSALFNRQ 177
+D++ + ++ + V G +N K + + +V S + SA F
Sbjct: 590 LDKYSVIIMDEAHER-SINTDVLLGILKNICLK--RNDLKLIVTSATIDAKKFSAFFGNA 646
Query: 178 PEWVIYHELVQTTKEYMR 195
P + I + EY+R
Sbjct: 647 PIYNIQGRTFKVHIEYLR 664
>SGD|S000003088 [details] [associations]
symbol:PRP43 "RNA helicase in the DEAH-box family"
species:4932 "Saccharomyces cerevisiae" [GO:0004004 "ATP-dependent
RNA helicase activity" evidence=IMP;IDA] [GO:0000390 "spliceosomal
complex disassembly" evidence=IGI;IDA] [GO:0030490 "maturation of
SSU-rRNA" evidence=IGI] [GO:0006397 "mRNA processing" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0030686 "90S preribosome" evidence=IDA] [GO:0071014 "post-mRNA
release spliceosomal complex" evidence=IMP] [GO:0006364 "rRNA
processing" evidence=IMP] [GO:0005739 "mitochondrion" evidence=IDA]
[GO:0042273 "ribosomal large subunit biogenesis" evidence=IMP]
[GO:0000462 "maturation of SSU-rRNA from tricistronic rRNA
transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)" evidence=IMP]
[GO:0000463 "maturation of LSU-rRNA from tricistronic rRNA
transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)" evidence=IMP]
[GO:0000466 "maturation of 5.8S rRNA from tricistronic rRNA
transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)" evidence=IMP]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0016787 "hydrolase
activity" evidence=IEA] [GO:0008380 "RNA splicing" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 SGD:S000003088
GO:GO:0005739 GO:GO:0005524 EMBL:BK006941 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0030686
eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717 GO:GO:0000463
GO:GO:0004004 HOGENOM:HOG000175261 GO:GO:0000390 GO:GO:0000466
GO:GO:0000462 KO:K12820 GeneTree:ENSGT00650000093246 OMA:TVLQIHA
OrthoDB:EOG4S7NZ4 GO:GO:0071014 EMBL:U41851 EMBL:Z72642 PIR:S64130
RefSeq:NP_011395.1 PDB:2XAU PDB:3KX2 PDBsum:2XAU PDBsum:3KX2
ProteinModelPortal:P53131 SMR:P53131 DIP:DIP-5152N IntAct:P53131
MINT:MINT-497996 STRING:P53131 PaxDb:P53131 PeptideAtlas:P53131
PRIDE:P53131 EnsemblFungi:YGL120C GeneID:852757 KEGG:sce:YGL120C
CYGD:YGL120c EvolutionaryTrace:P53131 NextBio:972201
Genevestigator:P53131 GermOnline:YGL120C Uniprot:P53131
Length = 767
Score = 441 (160.3 bits), Expect = 6.9e-41, P = 6.9e-41
Identities = 97/245 (39%), Positives = 150/245 (61%)
Query: 6 VTPISQMA-EFPLEPNLSKMLIMSVHLQCSDEVLTIVSMLSVQNVFYRPXXXXXXXXXXX 64
+TP+ ++A +FPL+P L+ MLI S QCS E+LTIV+MLSV NVF RP
Sbjct: 510 LTPLGRLASQFPLDPMLAVMLIGSFEFQCSQEILTIVAMLSVPNVFIRPTKDKKRADDAK 569
Query: 65 XXFNQMEGDHITLLAVYNSWRNNKFS----NAWCYENFVQIRTLKRAQDVRKQLLGIMDR 120
F +GDHITLL VY+++++++ + WC ++++ R+L A ++R QL +M+R
Sbjct: 570 NIFAHPDGDHITLLNVYHAFKSDEAYEYGIHKWCRDHYLNYRSLSAADNIRSQLERLMNR 629
Query: 121 HKLDVVSAGKNTVR----VQKAVCSGFFRNAAKK-DPQEGYRTLVDSQVVYIHPSSALFN 175
+ L++ + + + ++KA+ SGFF AKK +GY T+ D+Q V IHPS+ L
Sbjct: 630 YNLELNTTDYESPKYFDNIRKALASGFFMQVAKKRSGAKGYITVKDNQDVLIHPSTVL-G 688
Query: 176 RQPEWVIYHELVQTTKEYMREVTSIDPKWLVEFAPAFFKFSDPTKLSKFKKNQRL-EPLQ 234
EWVIY+E V T+K Y+R VTS+ P+WL+E APA++ S+ K +R+ E +
Sbjct: 689 HDAEWVIYNEFVLTSKNYIRTVTSVRPEWLIEIAPAYYDLSNFQKGDVKLSLERIKEKVD 748
Query: 235 RTNRI 239
R N +
Sbjct: 749 RLNEL 753
Score = 284 (105.0 bits), Expect = 4.7e-41, Sum P(2) = 4.7e-41
Identities = 54/101 (53%), Positives = 74/101 (73%)
Query: 231 EPLQRTNRISFPPGLLKQAVKKRPEIKLIVTSATLDAVKFSSYFFEAPIFTIPGRTFPVE 290
E +RT GLLKQ VK+RP++K+I+ SATLDA KF YF +AP+ +PGRT+PVE
Sbjct: 216 EAHERTLATDILMGLLKQVVKRRPDLKIIIMSATLDAEKFQRYFNDAPLLAVPGRTYPVE 275
Query: 291 VLYTKEPETDYLDASLITVMQIHLREPPGDVLLFLTGKLDV 331
+ YT E + DYLD+++ TV+QIH E GD+LLFLTG+ ++
Sbjct: 276 LYYTPEFQRDYLDSAIRTVLQIHATEEAGDILLFLTGEDEI 316
Score = 230 (86.0 bits), Expect = 4.7e-41, Sum P(2) = 4.7e-41
Identities = 48/114 (42%), Positives = 74/114 (64%)
Query: 330 DVRKQLLGIMDRHKLDVVSAGKNTVR----VQKAVCSGFFRNAAKK-DPQEGYRTLVDSQ 384
++R QL +M+R+ L++ + + + ++KA+ SGFF AKK +GY T+ D+Q
Sbjct: 618 NIRSQLERLMNRYNLELNTTDYESPKYFDNIRKALASGFFMQVAKKRSGAKGYITVKDNQ 677
Query: 385 VVYIHPSSALFNRQPEWVIYHELVQTTKEYMREVTSIDPKWLVEFAPAFFKFSD 438
V IHPS+ L EWVIY+E V T+K Y+R VTS+ P+WL+E APA++ S+
Sbjct: 678 DVLIHPSTVL-GHDAEWVIYNEFVLTSKNYIRTVTSVRPEWLIEIAPAYYDLSN 730
Score = 162 (62.1 bits), Expect = 6.4e-34, Sum P(2) = 6.4e-34
Identities = 40/68 (58%), Positives = 45/68 (66%)
Query: 481 RMKSLGPDVPELIILPVYSALPSEMQTRIFEAAP------PGSRKVVIATNIAETSLTID 534
R + GP L + P+Y +LP Q RIFE AP PG RKVVI+TNIAETSLTID
Sbjct: 332 REEGCGP----LSVYPLYGSLPPHQQQRIFEPAPESHNGRPG-RKVVISTNIAETSLTID 386
Query: 535 GIFYVVDP 542
GI YVVDP
Sbjct: 387 GIVYVVDP 394
>FB|FBgn0033160 [details] [associations]
symbol:CG11107 species:7227 "Drosophila melanogaster"
[GO:0008026 "ATP-dependent helicase activity" evidence=ISS]
[GO:0003724 "RNA helicase activity" evidence=ISS] [GO:0004004
"ATP-dependent RNA helicase activity" evidence=ISS] [GO:0000398
"mRNA splicing, via spliceosome" evidence=IC;ISS] [GO:0005681
"spliceosomal complex" evidence=ISS] [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0071013 "catalytic step 2 spliceosome" evidence=IDA]
[GO:0071011 "precatalytic spliceosome" evidence=IDA] [GO:0022008
"neurogenesis" evidence=IMP] InterPro:IPR001650 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 EMBL:AE013599
GO:GO:0005524 GO:GO:0022008 GO:GO:0003676 GO:GO:0071011
GO:GO:0000398 GO:GO:0071013 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
GO:GO:0004004 GO:GO:0016779 KO:K12820 GeneTree:ENSGT00650000093246
OMA:TVLQIHA EMBL:AY058484 RefSeq:NP_610269.1 UniGene:Dm.4189
SMR:Q7K3M5 STRING:Q7K3M5 EnsemblMetazoa:FBtr0088966 GeneID:35654
KEGG:dme:Dmel_CG11107 UCSC:CG11107-RA FlyBase:FBgn0033160
InParanoid:Q7K3M5 OrthoDB:EOG4D254T GenomeRNAi:35654 NextBio:794560
Uniprot:Q7K3M5
Length = 729
Score = 441 (160.3 bits), Expect = 5.4e-41, P = 5.4e-41
Identities = 94/228 (41%), Positives = 136/228 (59%)
Query: 12 MAEFPLEPNLSKMLIMSVHLQCSDEVLTIVSMLSVQNVFYRPXXXXXXXXXXXXXFNQME 71
M+EFPL+P L+KMLI S CS+E+L+I +MLSV F RP F ++
Sbjct: 495 MSEFPLDPQLAKMLIASCQHNCSNEILSITAMLSVPQCFVRPNEAKKAADEAKMRFAHID 554
Query: 72 GDHITLLAVYNSWRNNKFSNAWCYENFVQIRTLKRAQDVRKQLLGIMDRHKLDVVSA--- 128
GDH+TLL VY++++ + WCYENF+ R+LK A +VR+QL IMDR L S
Sbjct: 555 GDHLTLLNVYHAFKQSSEDPNWCYENFINFRSLKSADNVRQQLARIMDRFNLRRTSTEFT 614
Query: 129 GKNT-VRVQKAVCSGFFRNAAKKDPQEGYRTLVDSQVVYIHPSSALFNRQPEWVIYHELV 187
K+ V ++KA+ GFF A + Y T+ D+Q V +HPS+ L + +P+WVIY+E V
Sbjct: 615 SKDYYVNIRKALVQGFFMQVAHLERTGYYLTIKDNQNVQLHPSTCL-DHKPDWVIYNEFV 673
Query: 188 QTTKEYMREVTSIDPKWLVEFAPAFFKFSDPTKLSKFKKNQRLEPLQR 235
TTK Y+R VT + P+WL AP ++ D + + ++LE LQ+
Sbjct: 674 LTTKNYIRTVTDVKPEWLCCLAPQYY---DLNNFPQCEAKRQLELLQQ 718
Score = 271 (100.5 bits), Expect = 1.2e-37, Sum P(2) = 1.2e-37
Identities = 55/119 (46%), Positives = 81/119 (68%)
Query: 216 SDPTKLSKFKKNQRLEPLQRTNRISFPPGLLKQAVKKRPEIKLIVTSATLDAVKFSSYFF 275
SDP L +++ E +RT G+LK+ +++R ++KL+V SATLDA KF YF
Sbjct: 180 SDPM-LDQYQVILLDEAHERTLATDILMGVLKEVIRQRSDLKLVVMSATLDAGKFQQYFD 238
Query: 276 EAPIFTIPGRTFPVEVLYTKEPETDYLDASLITVMQIHL-REPPGDVLLFLTGKLDVRK 333
AP+ +PGRT PVE+ YT EPE DYL+A++ TV+QIH+ E GD+L+FLTG+ ++ +
Sbjct: 239 NAPLMKVPGRTHPVEIFYTPEPERDYLEAAIRTVIQIHMCEEIEGDILMFLTGQEEIEE 297
Score = 211 (79.3 bits), Expect = 1.2e-37, Sum P(2) = 1.2e-37
Identities = 51/134 (38%), Positives = 76/134 (56%)
Query: 330 DVRKQLLGIMDRHKLDVVSA---GKNT-VRVQKAVCSGFFRNAAKKDPQEGYRTLVDSQV 385
+VR+QL IMDR L S K+ V ++KA+ GFF A + Y T+ D+Q
Sbjct: 592 NVRQQLARIMDRFNLRRTSTEFTSKDYYVNIRKALVQGFFMQVAHLERTGYYLTIKDNQN 651
Query: 386 VYIHPSSALFNRQPEWVIYHELVQTTKEYMREVTSIDPKWLVEFAPAFFKFSDPTKLSKF 445
V +HPS+ L + +P+WVIY+E V TTK Y+R VT + P+WL AP ++ D +
Sbjct: 652 VQLHPSTCL-DHKPDWVIYNEFVLTTKNYIRTVTDVKPEWLCCLAPQYY---DLNNFPQC 707
Query: 446 KKNQRLEPLYNKYE 459
+ ++LE L + E
Sbjct: 708 EAKRQLELLQQRLE 721
Score = 205 (77.2 bits), Expect = 5.0e-37, Sum P(2) = 5.0e-37
Identities = 42/81 (51%), Positives = 59/81 (72%)
Query: 468 REEIDTACEILYERMKSLGPDVPELIILPVYSALPSEMQTRIFEAAPP----GS--RKVV 521
+EEI+ AC+ + + +LG ++ EL +P+YS LP +Q RIFE APP G+ RKVV
Sbjct: 292 QEEIEEACKRIKREIDNLGSEIGELKCIPLYSTLPPNLQQRIFEPAPPPNANGAIGRKVV 351
Query: 522 IATNIAETSLTIDGIFYVVDP 542
++TNIAETSLTIDG+ +V+DP
Sbjct: 352 VSTNIAETSLTIDGVVFVIDP 372
Score = 43 (20.2 bits), Expect = 1.1e-12, Sum P(2) = 1.1e-12
Identities = 19/79 (24%), Positives = 35/79 (44%)
Query: 405 HELVQTTKEYMREVTSIDPKWLVEFAPAFFK----FSDPTKLSKFKKNQRL-EPLYNKYE 459
H+ + E T+ P+W V+FA + + + P +++ QR+ E + K
Sbjct: 88 HQCIVLVGETGSGKTTQIPQWCVDFAVSKGRKGVSCTQPRRVAAMSVAQRVSEEMDVKLG 147
Query: 460 EPNAWRISREEIDTACEIL 478
E + I E+ TA +L
Sbjct: 148 EEVGYSIRFEDCSTAKTLL 166
>UNIPROTKB|E2RC56 [details] [associations]
symbol:DHX38 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0071013 "catalytic step 2 spliceosome"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0003676
"nucleic acid binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0003676 GO:GO:0071013 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
GeneTree:ENSGT00700000104421 KO:K12815 OMA:PSRSTWE CTD:9785
EMBL:AAEX03004090 RefSeq:XP_536800.2 ProteinModelPortal:E2RC56
Ensembl:ENSCAFT00000032225 GeneID:479669 KEGG:cfa:479669
NextBio:20854813 Uniprot:E2RC56
Length = 1226
Score = 447 (162.4 bits), Expect = 5.9e-41, P = 5.9e-41
Identities = 88/220 (40%), Positives = 132/220 (60%)
Query: 12 MAEFPLEPNLSKMLIMSVHLQCSDEVLTIVSMLSVQNVFYRPXXXXXXXXXXXXXFNQME 71
M EFPL+P LSKMLI+S + CS E+L IVSMLSV +FYRP F E
Sbjct: 945 MVEFPLDPALSKMLIVSCDMGCSSEILLIVSMLSVPAIFYRPKGREEESDQIREKFAVPE 1004
Query: 72 GDHITLLAVYNSWRNNKFSNAWCYENFVQIRTLKRAQDVRKQLLGIMDRHKLDVVSAGKN 131
DH+T L VY W+NN +S WC ++F+ + +++ ++VR QL IM + ++ + S G +
Sbjct: 1005 SDHLTYLNVYLQWKNNNYSTIWCNDHFIHAKAMRKVREVRAQLKDIMVQQRMSLASCGTD 1064
Query: 132 TVRVQKAVCSGFFRNAAKKDPQEGYRTLVDSQVVYIHPSSALFNR--QPEWVIYHELVQT 189
V+K +C+ +F AAK Y + ++HP+S+LF P++++YHELV T
Sbjct: 1065 WDIVRKCICAAYFHQAAKLKGIGEYVNIRTGMPCHLHPTSSLFGMGYTPDYIVYHELVMT 1124
Query: 190 TKEYMREVTSIDPKWLVEFAPAFFKFSDPTKLSKFKKNQR 229
TKEYM+ VT++D +WL E P F+ K S+ ++N+R
Sbjct: 1125 TKEYMQCVTAVDGEWLAELGPMFYSVKQAGK-SR-QENRR 1162
Score = 261 (96.9 bits), Expect = 1.6e-36, Sum P(2) = 1.6e-36
Identities = 45/88 (51%), Positives = 70/88 (79%)
Query: 244 GLLKQAVKKRPEIKLIVTSATLDAVKFSSYFFEAPIFTIPGRTFPVEVLYTKEPETDYLD 303
GLL++ V +R ++KLIVTSAT+DA KF+++F PIF IPGRTFPV++L++K P+ DY++
Sbjct: 665 GLLREVVARRSDLKLIVTSATMDAEKFAAFFGNVPIFHIPGRTFPVDILFSKTPQEDYVE 724
Query: 304 ASLITVMQIHLREPPGDVLLFLTGKLDV 331
A++ +Q+HL PGD+L+F+ G+ D+
Sbjct: 725 AAVKQSLQVHLSGAPGDILIFMPGQEDI 752
Score = 218 (81.8 bits), Expect = 1.6e-36, Sum P(2) = 1.6e-36
Identities = 48/144 (33%), Positives = 81/144 (56%)
Query: 330 DVRKQLLGIMDRHKLDVVSAGKNTVRVQKAVCSGFFRNAAKKDPQEGYRTLVDSQVVYIH 389
+VR QL IM + ++ + S G + V+K +C+ +F AAK Y + ++H
Sbjct: 1042 EVRAQLKDIMVQQRMSLASCGTDWDIVRKCICAAYFHQAAKLKGIGEYVNIRTGMPCHLH 1101
Query: 390 PSSALFNR--QPEWVIYHELVQTTKEYMREVTSIDPKWLVEFAPAFFKFSDPTKLSKFKK 447
P+S+LF P++++YHELV TTKEYM+ VT++D +WL E P F+ K S+ +
Sbjct: 1102 PTSSLFGMGYTPDYIVYHELVMTTKEYMQCVTAVDGEWLAELGPMFYSVKQAGK-SRQEN 1160
Query: 448 NQRLEPLYNKYEEPNAWRISREEI 471
+R + + EE A ++ E++
Sbjct: 1161 RRRAKEEASAMEEEMA--LAEEQL 1182
Score = 199 (75.1 bits), Expect = 1.6e-34, Sum P(2) = 1.6e-34
Identities = 36/74 (48%), Positives = 55/74 (74%)
Query: 468 REEIDTACEILYERMKSLGPDVPELIILPVYSALPSEMQTRIFEAAPPGSRKVVIATNIA 527
+E+I+ + + E ++ L + P L +LP+YS LPS++Q +IF+ AP G RK ++ATNIA
Sbjct: 749 QEDIEVTSDQIVEHLEEL-ENAPALAVLPIYSQLPSDLQAKIFQKAPDGVRKCIVATNIA 807
Query: 528 ETSLTIDGIFYVVD 541
ETSLT+DGI +V+D
Sbjct: 808 ETSLTVDGIMFVID 821
Score = 38 (18.4 bits), Expect = 6.0e-13, Sum P(2) = 6.0e-13
Identities = 9/23 (39%), Positives = 11/23 (47%)
Query: 150 KDPQEGYRTLVDSQVVYIHPSSA 172
K PQE Y Q + +H S A
Sbjct: 716 KTPQEDYVEAAVKQSLQVHLSGA 738
Score = 38 (18.4 bits), Expect = 7.2e-11, Sum P(2) = 7.2e-11
Identities = 9/23 (39%), Positives = 11/23 (47%)
Query: 371 KDPQEGYRTLVDSQVVYIHPSSA 393
K PQE Y Q + +H S A
Sbjct: 716 KTPQEDYVEAAVKQSLQVHLSGA 738
>UNIPROTKB|Q92620 [details] [associations]
symbol:DHX38 "Pre-mRNA-splicing factor ATP-dependent RNA
helicase PRP16" species:9606 "Homo sapiens" [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0000398 "mRNA splicing, via spliceosome" evidence=IC;IDA;TAS]
[GO:0005634 "nucleus" evidence=NAS] [GO:0071013 "catalytic step 2
spliceosome" evidence=IDA] [GO:0005654 "nucleoplasm" evidence=TAS]
[GO:0006366 "transcription from RNA polymerase II promoter"
evidence=TAS] [GO:0006369 "termination of RNA polymerase II
transcription" evidence=TAS] [GO:0006406 "mRNA export from nucleus"
evidence=TAS] [GO:0008380 "RNA splicing" evidence=TAS] [GO:0010467
"gene expression" evidence=TAS] [GO:0031124 "mRNA 3'-end
processing" evidence=TAS] Reactome:REACT_71 InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 EMBL:AC004682
GO:GO:0005524 GO:GO:0005654 Reactome:REACT_1675 GO:GO:0003676
GO:GO:0006406 GO:GO:0000398 GO:GO:0071013 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 EMBL:CH471166 Reactome:REACT_1788
eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
HOGENOM:HOG000175261 GO:GO:0006369 GO:GO:0031124 Reactome:REACT_78
HOVERGEN:HBG039428 KO:K12815 OMA:PSRSTWE CTD:9785 EMBL:AF038391
EMBL:D86977 EMBL:BC004235 EMBL:BC008340 IPI:IPI00294211
RefSeq:NP_054722.2 UniGene:Hs.151218 ProteinModelPortal:Q92620
SMR:Q92620 IntAct:Q92620 STRING:Q92620 PhosphoSite:Q92620
DMDM:85700389 PaxDb:Q92620 PeptideAtlas:Q92620 PRIDE:Q92620
DNASU:9785 Ensembl:ENST00000268482 GeneID:9785 KEGG:hsa:9785
UCSC:uc002fcb.3 GeneCards:GC16P072127 HGNC:HGNC:17211 HPA:HPA041347
MIM:605584 neXtProt:NX_Q92620 PharmGKB:PA27225 InParanoid:Q92620
OrthoDB:EOG4Z62MS PhylomeDB:Q92620 ChiTaRS:DHX38 GenomeRNAi:9785
NextBio:36846 ArrayExpress:Q92620 Bgee:Q92620 CleanEx:HS_DHX38
Genevestigator:Q92620 GermOnline:ENSG00000140829 Uniprot:Q92620
Length = 1227
Score = 447 (162.4 bits), Expect = 5.9e-41, P = 5.9e-41
Identities = 88/220 (40%), Positives = 132/220 (60%)
Query: 12 MAEFPLEPNLSKMLIMSVHLQCSDEVLTIVSMLSVQNVFYRPXXXXXXXXXXXXXFNQME 71
M EFPL+P LSKMLI+S + CS E+L IVSMLSV +FYRP F E
Sbjct: 946 MVEFPLDPALSKMLIVSCDMGCSSEILLIVSMLSVPAIFYRPKGREEESDQIREKFAVPE 1005
Query: 72 GDHITLLAVYNSWRNNKFSNAWCYENFVQIRTLKRAQDVRKQLLGIMDRHKLDVVSAGKN 131
DH+T L VY W+NN +S WC ++F+ + +++ ++VR QL IM + ++ + S G +
Sbjct: 1006 SDHLTYLNVYLQWKNNNYSTIWCNDHFIHAKAMRKVREVRAQLKDIMVQQRMSLASCGTD 1065
Query: 132 TVRVQKAVCSGFFRNAAKKDPQEGYRTLVDSQVVYIHPSSALFNR--QPEWVIYHELVQT 189
V+K +C+ +F AAK Y + ++HP+S+LF P++++YHELV T
Sbjct: 1066 WDIVRKCICAAYFHQAAKLKGIGEYVNIRTGMPCHLHPTSSLFGMGYTPDYIVYHELVMT 1125
Query: 190 TKEYMREVTSIDPKWLVEFAPAFFKFSDPTKLSKFKKNQR 229
TKEYM+ VT++D +WL E P F+ K S+ ++N+R
Sbjct: 1126 TKEYMQCVTAVDGEWLAELGPMFYSVKQAGK-SR-QENRR 1163
Score = 261 (96.9 bits), Expect = 1.6e-36, Sum P(2) = 1.6e-36
Identities = 45/88 (51%), Positives = 70/88 (79%)
Query: 244 GLLKQAVKKRPEIKLIVTSATLDAVKFSSYFFEAPIFTIPGRTFPVEVLYTKEPETDYLD 303
GLL++ V +R ++KLIVTSAT+DA KF+++F PIF IPGRTFPV++L++K P+ DY++
Sbjct: 666 GLLREVVARRSDLKLIVTSATMDAEKFAAFFGNVPIFHIPGRTFPVDILFSKTPQEDYVE 725
Query: 304 ASLITVMQIHLREPPGDVLLFLTGKLDV 331
A++ +Q+HL PGD+L+F+ G+ D+
Sbjct: 726 AAVKQSLQVHLSGAPGDILIFMPGQEDI 753
Score = 218 (81.8 bits), Expect = 1.6e-36, Sum P(2) = 1.6e-36
Identities = 48/144 (33%), Positives = 81/144 (56%)
Query: 330 DVRKQLLGIMDRHKLDVVSAGKNTVRVQKAVCSGFFRNAAKKDPQEGYRTLVDSQVVYIH 389
+VR QL IM + ++ + S G + V+K +C+ +F AAK Y + ++H
Sbjct: 1043 EVRAQLKDIMVQQRMSLASCGTDWDIVRKCICAAYFHQAAKLKGIGEYVNIRTGMPCHLH 1102
Query: 390 PSSALFNR--QPEWVIYHELVQTTKEYMREVTSIDPKWLVEFAPAFFKFSDPTKLSKFKK 447
P+S+LF P++++YHELV TTKEYM+ VT++D +WL E P F+ K S+ +
Sbjct: 1103 PTSSLFGMGYTPDYIVYHELVMTTKEYMQCVTAVDGEWLAELGPMFYSVKQAGK-SRQEN 1161
Query: 448 NQRLEPLYNKYEEPNAWRISREEI 471
+R + + EE A ++ E++
Sbjct: 1162 RRRAKEEASAMEEEMA--LAEEQL 1183
Score = 199 (75.1 bits), Expect = 1.6e-34, Sum P(2) = 1.6e-34
Identities = 36/74 (48%), Positives = 55/74 (74%)
Query: 468 REEIDTACEILYERMKSLGPDVPELIILPVYSALPSEMQTRIFEAAPPGSRKVVIATNIA 527
+E+I+ + + E ++ L + P L +LP+YS LPS++Q +IF+ AP G RK ++ATNIA
Sbjct: 750 QEDIEVTSDQIVEHLEEL-ENAPALAVLPIYSQLPSDLQAKIFQKAPDGVRKCIVATNIA 808
Query: 528 ETSLTIDGIFYVVD 541
ETSLT+DGI +V+D
Sbjct: 809 ETSLTVDGIMFVID 822
Score = 38 (18.4 bits), Expect = 6.0e-13, Sum P(2) = 6.0e-13
Identities = 9/23 (39%), Positives = 11/23 (47%)
Query: 150 KDPQEGYRTLVDSQVVYIHPSSA 172
K PQE Y Q + +H S A
Sbjct: 717 KTPQEDYVEAAVKQSLQVHLSGA 739
Score = 38 (18.4 bits), Expect = 7.2e-11, Sum P(2) = 7.2e-11
Identities = 9/23 (39%), Positives = 11/23 (47%)
Query: 371 KDPQEGYRTLVDSQVVYIHPSSA 393
K PQE Y Q + +H S A
Sbjct: 717 KTPQEDYVEAAVKQSLQVHLSGA 739
>RGD|1310345 [details] [associations]
symbol:Dhx38 "DEAH (Asp-Glu-Ala-His) box polypeptide 38"
species:10116 "Rattus norvegicus" [GO:0000398 "mRNA splicing, via
spliceosome" evidence=ISO] [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0071013
"catalytic step 2 spliceosome" evidence=IEA;ISO] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 RGD:1310345
GO:GO:0005524 GO:GO:0003676 GO:GO:0071013 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 GeneTree:ENSGT00700000104421 OrthoDB:EOG4Z62MS
IPI:IPI00371467 PRIDE:D4A321 Ensembl:ENSRNOT00000019810
UCSC:RGD:1310345 Uniprot:D4A321
Length = 1228
Score = 447 (162.4 bits), Expect = 5.9e-41, P = 5.9e-41
Identities = 88/220 (40%), Positives = 132/220 (60%)
Query: 12 MAEFPLEPNLSKMLIMSVHLQCSDEVLTIVSMLSVQNVFYRPXXXXXXXXXXXXXFNQME 71
M EFPL+P LSKMLI+S + CS E+L IVSMLSV +FYRP F E
Sbjct: 947 MVEFPLDPALSKMLIVSCDMGCSSEILLIVSMLSVPAIFYRPKGREEESDQIREKFAVPE 1006
Query: 72 GDHITLLAVYNSWRNNKFSNAWCYENFVQIRTLKRAQDVRKQLLGIMDRHKLDVVSAGKN 131
DH+T L VY W+NN +S WC ++F+ + +++ ++VR QL IM + ++ + S G +
Sbjct: 1007 SDHLTYLNVYLQWKNNNYSTIWCNDHFIHAKAMRKVREVRAQLKDIMVQQRMSLASCGTD 1066
Query: 132 TVRVQKAVCSGFFRNAAKKDPQEGYRTLVDSQVVYIHPSSALFNR--QPEWVIYHELVQT 189
V+K +C+ +F AAK Y + ++HP+S+LF P++++YHELV T
Sbjct: 1067 WDIVRKCICAAYFHQAAKLKGIGEYVNIRTGMPCHLHPTSSLFGMGYTPDYIVYHELVMT 1126
Query: 190 TKEYMREVTSIDPKWLVEFAPAFFKFSDPTKLSKFKKNQR 229
TKEYM+ VT++D +WL E P F+ K S+ ++N+R
Sbjct: 1127 TKEYMQCVTAVDGEWLAELGPMFYSVKQAGK-SR-QENRR 1164
Score = 260 (96.6 bits), Expect = 2.1e-36, Sum P(2) = 2.1e-36
Identities = 45/88 (51%), Positives = 70/88 (79%)
Query: 244 GLLKQAVKKRPEIKLIVTSATLDAVKFSSYFFEAPIFTIPGRTFPVEVLYTKEPETDYLD 303
GLL++ V +R ++KLIVTSAT+DA KF+++F PIF IPGRTFPV++L++K P+ DY++
Sbjct: 667 GLLREVVARRSDLKLIVTSATMDADKFAAFFGNVPIFHIPGRTFPVDILFSKTPQEDYVE 726
Query: 304 ASLITVMQIHLREPPGDVLLFLTGKLDV 331
A++ +Q+HL PGD+L+F+ G+ D+
Sbjct: 727 AAVKQSLQVHLSGAPGDILIFMPGQEDI 754
Score = 218 (81.8 bits), Expect = 2.1e-36, Sum P(2) = 2.1e-36
Identities = 48/144 (33%), Positives = 81/144 (56%)
Query: 330 DVRKQLLGIMDRHKLDVVSAGKNTVRVQKAVCSGFFRNAAKKDPQEGYRTLVDSQVVYIH 389
+VR QL IM + ++ + S G + V+K +C+ +F AAK Y + ++H
Sbjct: 1044 EVRAQLKDIMVQQRMSLASCGTDWDIVRKCICAAYFHQAAKLKGIGEYVNIRTGMPCHLH 1103
Query: 390 PSSALFNR--QPEWVIYHELVQTTKEYMREVTSIDPKWLVEFAPAFFKFSDPTKLSKFKK 447
P+S+LF P++++YHELV TTKEYM+ VT++D +WL E P F+ K S+ +
Sbjct: 1104 PTSSLFGMGYTPDYIVYHELVMTTKEYMQCVTAVDGEWLAELGPMFYSVKQAGK-SRQEN 1162
Query: 448 NQRLEPLYNKYEEPNAWRISREEI 471
+R + + EE A ++ E++
Sbjct: 1163 RRRAKEEASAMEEEMA--LAEEQL 1184
Score = 199 (75.1 bits), Expect = 2.1e-34, Sum P(2) = 2.1e-34
Identities = 36/74 (48%), Positives = 55/74 (74%)
Query: 468 REEIDTACEILYERMKSLGPDVPELIILPVYSALPSEMQTRIFEAAPPGSRKVVIATNIA 527
+E+I+ + + E ++ L + P L +LP+YS LPS++Q +IF+ AP G RK ++ATNIA
Sbjct: 751 QEDIEVTSDQIVEHLEEL-ENAPALAVLPIYSQLPSDLQAKIFQKAPDGVRKCIVATNIA 809
Query: 528 ETSLTIDGIFYVVD 541
ETSLT+DGI +V+D
Sbjct: 810 ETSLTVDGIMFVID 823
Score = 38 (18.4 bits), Expect = 6.1e-13, Sum P(2) = 6.1e-13
Identities = 9/23 (39%), Positives = 11/23 (47%)
Query: 150 KDPQEGYRTLVDSQVVYIHPSSA 172
K PQE Y Q + +H S A
Sbjct: 718 KTPQEDYVEAAVKQSLQVHLSGA 740
Score = 38 (18.4 bits), Expect = 7.2e-11, Sum P(2) = 7.2e-11
Identities = 9/23 (39%), Positives = 11/23 (47%)
Query: 371 KDPQEGYRTLVDSQVVYIHPSSA 393
K PQE Y Q + +H S A
Sbjct: 718 KTPQEDYVEAAVKQSLQVHLSGA 740
>UNIPROTKB|I3LU50 [details] [associations]
symbol:I3LU50 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0003676 "nucleic acid
binding" evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
Pfam:PF00271 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001 PROSITE:PS51192
GO:GO:0008026 GeneTree:ENSGT00700000104421
Ensembl:ENSSSCT00000026672 OMA:GHEVAFS Uniprot:I3LU50
Length = 265
Score = 264 (98.0 bits), Expect = 1.1e-40, Sum P(2) = 1.1e-40
Identities = 46/88 (52%), Positives = 70/88 (79%)
Query: 244 GLLKQAVKKRPEIKLIVTSATLDAVKFSSYFFEAPIFTIPGRTFPVEVLYTKEPETDYLD 303
GLL++ V +R ++KLIVTSAT+DA KF+S+F PIF IPGRTFPV++L++K P+ DY++
Sbjct: 76 GLLREVVARRSDLKLIVTSATMDAEKFASFFGNVPIFHIPGRTFPVDILFSKTPQEDYVE 135
Query: 304 ASLITVMQIHLREPPGDVLLFLTGKLDV 331
A++ +Q+HL PGD+L+F+ G+ D+
Sbjct: 136 AAVKQSLQVHLSGAPGDILIFMPGQEDI 163
Score = 199 (75.1 bits), Expect = 1.1e-40, Sum P(2) = 1.1e-40
Identities = 36/74 (48%), Positives = 55/74 (74%)
Query: 468 REEIDTACEILYERMKSLGPDVPELIILPVYSALPSEMQTRIFEAAPPGSRKVVIATNIA 527
+E+I+ + + E ++ L + P L +LP+YS LPS++Q +IF+ AP G RK ++ATNIA
Sbjct: 160 QEDIEVTSDQIVEHLEEL-ENAPALAVLPIYSQLPSDLQAKIFQKAPDGVRKCIVATNIA 218
Query: 528 ETSLTIDGIFYVVD 541
ETSLT+DGI +V+D
Sbjct: 219 ETSLTVDGIMFVID 232
Score = 38 (18.4 bits), Expect = 1.0e-16, Sum P(2) = 1.0e-16
Identities = 9/23 (39%), Positives = 11/23 (47%)
Query: 150 KDPQEGYRTLVDSQVVYIHPSSA 172
K PQE Y Q + +H S A
Sbjct: 127 KTPQEDYVEAAVKQSLQVHLSGA 149
Score = 38 (18.4 bits), Expect = 1.0e-16, Sum P(2) = 1.0e-16
Identities = 9/23 (39%), Positives = 11/23 (47%)
Query: 371 KDPQEGYRTLVDSQVVYIHPSSA 393
K PQE Y Q + +H S A
Sbjct: 127 KTPQEDYVEAAVKQSLQVHLSGA 149
>UNIPROTKB|F1MVJ1 [details] [associations]
symbol:DHX38 "Pre-mRNA-splicing factor ATP-dependent RNA
helicase PRP16" species:9913 "Bos taurus" [GO:0071013 "catalytic
step 2 spliceosome" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408
PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
GO:GO:0005524 GO:GO:0003676 GO:GO:0071013 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 GeneTree:ENSGT00700000104421 OMA:PSRSTWE
IPI:IPI00690755 EMBL:DAAA02046748 EMBL:DAAA02046749
Ensembl:ENSBTAT00000045480 ArrayExpress:F1MVJ1 Uniprot:F1MVJ1
Length = 1226
Score = 443 (161.0 bits), Expect = 1.6e-40, P = 1.6e-40
Identities = 87/220 (39%), Positives = 132/220 (60%)
Query: 12 MAEFPLEPNLSKMLIMSVHLQCSDEVLTIVSMLSVQNVFYRPXXXXXXXXXXXXXFNQME 71
M EFPL+P LSKMLI+S + CS E+L IVSMLSV +FYRP F E
Sbjct: 945 MVEFPLDPALSKMLIVSCDMGCSSEILLIVSMLSVPAIFYRPKGREEESDQIREKFAVPE 1004
Query: 72 GDHITLLAVYNSWRNNKFSNAWCYENFVQIRTLKRAQDVRKQLLGIMDRHKLDVVSAGKN 131
DH++ L VY W+NN +S WC ++F+ + +++ ++VR QL IM + ++ + S G +
Sbjct: 1005 SDHLSYLNVYLQWKNNNYSTIWCNDHFIHAKAMRKVREVRAQLKDIMVQQRMSLASCGTD 1064
Query: 132 TVRVQKAVCSGFFRNAAKKDPQEGYRTLVDSQVVYIHPSSALFNR--QPEWVIYHELVQT 189
V+K +C+ +F AAK Y + ++HP+S+LF P++++YHELV T
Sbjct: 1065 WDIVRKCICAAYFHQAAKLKGIGEYVNIRTGMPCHLHPTSSLFGMGYTPDYIVYHELVMT 1124
Query: 190 TKEYMREVTSIDPKWLVEFAPAFFKFSDPTKLSKFKKNQR 229
TKEYM+ VT++D +WL E P F+ K S+ ++N+R
Sbjct: 1125 TKEYMQCVTAVDGEWLAELGPMFYSVKQAGK-SR-QENRR 1162
Score = 264 (98.0 bits), Expect = 7.4e-37, Sum P(2) = 7.4e-37
Identities = 46/88 (52%), Positives = 70/88 (79%)
Query: 244 GLLKQAVKKRPEIKLIVTSATLDAVKFSSYFFEAPIFTIPGRTFPVEVLYTKEPETDYLD 303
GLL++ V +R ++KLIVTSAT+DA KF+S+F PIF IPGRTFPV++L++K P+ DY++
Sbjct: 666 GLLREVVARRSDLKLIVTSATMDAEKFASFFGNVPIFHIPGRTFPVDILFSKTPQEDYVE 725
Query: 304 ASLITVMQIHLREPPGDVLLFLTGKLDV 331
A++ +Q+HL PGD+L+F+ G+ D+
Sbjct: 726 AAVKQSLQVHLSGAPGDILIFMPGQEDI 753
Score = 218 (81.8 bits), Expect = 7.4e-37, Sum P(2) = 7.4e-37
Identities = 48/144 (33%), Positives = 81/144 (56%)
Query: 330 DVRKQLLGIMDRHKLDVVSAGKNTVRVQKAVCSGFFRNAAKKDPQEGYRTLVDSQVVYIH 389
+VR QL IM + ++ + S G + V+K +C+ +F AAK Y + ++H
Sbjct: 1042 EVRAQLKDIMVQQRMSLASCGTDWDIVRKCICAAYFHQAAKLKGIGEYVNIRTGMPCHLH 1101
Query: 390 PSSALFNR--QPEWVIYHELVQTTKEYMREVTSIDPKWLVEFAPAFFKFSDPTKLSKFKK 447
P+S+LF P++++YHELV TTKEYM+ VT++D +WL E P F+ K S+ +
Sbjct: 1102 PTSSLFGMGYTPDYIVYHELVMTTKEYMQCVTAVDGEWLAELGPMFYSVKQAGK-SRQEN 1160
Query: 448 NQRLEPLYNKYEEPNAWRISREEI 471
+R + + EE A ++ E++
Sbjct: 1161 RRRAKEEASAMEEEMA--LAEEQL 1182
Score = 199 (75.1 bits), Expect = 7.3e-35, Sum P(2) = 7.3e-35
Identities = 36/74 (48%), Positives = 55/74 (74%)
Query: 468 REEIDTACEILYERMKSLGPDVPELIILPVYSALPSEMQTRIFEAAPPGSRKVVIATNIA 527
+E+I+ + + E ++ L + P L +LP+YS LPS++Q +IF+ AP G RK ++ATNIA
Sbjct: 750 QEDIEVTSDQIVEHLEEL-ENAPALAVLPIYSQLPSDLQAKIFQKAPDGVRKCIVATNIA 808
Query: 528 ETSLTIDGIFYVVD 541
ETSLT+DGI +V+D
Sbjct: 809 ETSLTVDGIMFVID 822
Score = 38 (18.4 bits), Expect = 6.0e-13, Sum P(2) = 6.0e-13
Identities = 9/23 (39%), Positives = 11/23 (47%)
Query: 150 KDPQEGYRTLVDSQVVYIHPSSA 172
K PQE Y Q + +H S A
Sbjct: 717 KTPQEDYVEAAVKQSLQVHLSGA 739
Score = 38 (18.4 bits), Expect = 7.2e-11, Sum P(2) = 7.2e-11
Identities = 9/23 (39%), Positives = 11/23 (47%)
Query: 371 KDPQEGYRTLVDSQVVYIHPSSA 393
K PQE Y Q + +H S A
Sbjct: 717 KTPQEDYVEAAVKQSLQVHLSGA 739
>UNIPROTKB|Q17R09 [details] [associations]
symbol:DHX38 "Pre-mRNA-splicing factor ATP-dependent RNA
helicase PRP16" species:9913 "Bos taurus" [GO:0008380 "RNA
splicing" evidence=IEA] [GO:0006397 "mRNA processing" evidence=IEA]
[GO:0005681 "spliceosomal complex" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 GO:GO:0005524 GO:GO:0008380 GO:GO:0006397
GO:GO:0005681 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 HOGENOM:HOG000175261 HOVERGEN:HBG039428 KO:K12815
EMBL:BC118085 IPI:IPI00690755 RefSeq:NP_001069266.1
UniGene:Bt.42896 ProteinModelPortal:Q17R09 STRING:Q17R09
PRIDE:Q17R09 GeneID:520046 KEGG:bta:520046 CTD:9785
NextBio:20873012 Uniprot:Q17R09
Length = 1227
Score = 443 (161.0 bits), Expect = 1.6e-40, P = 1.6e-40
Identities = 87/220 (39%), Positives = 132/220 (60%)
Query: 12 MAEFPLEPNLSKMLIMSVHLQCSDEVLTIVSMLSVQNVFYRPXXXXXXXXXXXXXFNQME 71
M EFPL+P LSKMLI+S + CS E+L IVSMLSV +FYRP F E
Sbjct: 946 MVEFPLDPALSKMLIVSCDMGCSSEILLIVSMLSVPAIFYRPKGREEESDQIREKFAVPE 1005
Query: 72 GDHITLLAVYNSWRNNKFSNAWCYENFVQIRTLKRAQDVRKQLLGIMDRHKLDVVSAGKN 131
DH++ L VY W+NN +S WC ++F+ + +++ ++VR QL IM + ++ + S G +
Sbjct: 1006 SDHLSYLNVYLQWKNNNYSTIWCNDHFIHAKAMRKVREVRAQLKDIMVQQRMSLASCGTD 1065
Query: 132 TVRVQKAVCSGFFRNAAKKDPQEGYRTLVDSQVVYIHPSSALFNR--QPEWVIYHELVQT 189
V+K +C+ +F AAK Y + ++HP+S+LF P++++YHELV T
Sbjct: 1066 WDIVRKCICAAYFHQAAKLKGIGEYVNIRTGMPCHLHPTSSLFGMGYTPDYIVYHELVMT 1125
Query: 190 TKEYMREVTSIDPKWLVEFAPAFFKFSDPTKLSKFKKNQR 229
TKEYM+ VT++D +WL E P F+ K S+ ++N+R
Sbjct: 1126 TKEYMQCVTAVDGEWLAELGPMFYSVKQAGK-SR-QENRR 1163
Score = 264 (98.0 bits), Expect = 7.4e-37, Sum P(2) = 7.4e-37
Identities = 46/88 (52%), Positives = 70/88 (79%)
Query: 244 GLLKQAVKKRPEIKLIVTSATLDAVKFSSYFFEAPIFTIPGRTFPVEVLYTKEPETDYLD 303
GLL++ V +R ++KLIVTSAT+DA KF+S+F PIF IPGRTFPV++L++K P+ DY++
Sbjct: 666 GLLREVVARRSDLKLIVTSATMDAEKFASFFGNVPIFHIPGRTFPVDILFSKTPQEDYVE 725
Query: 304 ASLITVMQIHLREPPGDVLLFLTGKLDV 331
A++ +Q+HL PGD+L+F+ G+ D+
Sbjct: 726 AAVKQSLQVHLSGAPGDILIFMPGQEDI 753
Score = 218 (81.8 bits), Expect = 7.4e-37, Sum P(2) = 7.4e-37
Identities = 48/144 (33%), Positives = 81/144 (56%)
Query: 330 DVRKQLLGIMDRHKLDVVSAGKNTVRVQKAVCSGFFRNAAKKDPQEGYRTLVDSQVVYIH 389
+VR QL IM + ++ + S G + V+K +C+ +F AAK Y + ++H
Sbjct: 1043 EVRAQLKDIMVQQRMSLASCGTDWDIVRKCICAAYFHQAAKLKGIGEYVNIRTGMPCHLH 1102
Query: 390 PSSALFNR--QPEWVIYHELVQTTKEYMREVTSIDPKWLVEFAPAFFKFSDPTKLSKFKK 447
P+S+LF P++++YHELV TTKEYM+ VT++D +WL E P F+ K S+ +
Sbjct: 1103 PTSSLFGMGYTPDYIVYHELVMTTKEYMQCVTAVDGEWLAELGPMFYSVKQAGK-SRQEN 1161
Query: 448 NQRLEPLYNKYEEPNAWRISREEI 471
+R + + EE A ++ E++
Sbjct: 1162 RRRAKEEASAMEEEMA--LAEEQL 1183
Score = 199 (75.1 bits), Expect = 7.3e-35, Sum P(2) = 7.3e-35
Identities = 36/74 (48%), Positives = 55/74 (74%)
Query: 468 REEIDTACEILYERMKSLGPDVPELIILPVYSALPSEMQTRIFEAAPPGSRKVVIATNIA 527
+E+I+ + + E ++ L + P L +LP+YS LPS++Q +IF+ AP G RK ++ATNIA
Sbjct: 750 QEDIEVTSDQIVEHLEEL-ENAPALAVLPIYSQLPSDLQAKIFQKAPDGVRKCIVATNIA 808
Query: 528 ETSLTIDGIFYVVD 541
ETSLT+DGI +V+D
Sbjct: 809 ETSLTVDGIMFVID 822
Score = 38 (18.4 bits), Expect = 6.0e-13, Sum P(2) = 6.0e-13
Identities = 9/23 (39%), Positives = 11/23 (47%)
Query: 150 KDPQEGYRTLVDSQVVYIHPSSA 172
K PQE Y Q + +H S A
Sbjct: 717 KTPQEDYVEAAVKQSLQVHLSGA 739
Score = 38 (18.4 bits), Expect = 7.2e-11, Sum P(2) = 7.2e-11
Identities = 9/23 (39%), Positives = 11/23 (47%)
Query: 371 KDPQEGYRTLVDSQVVYIHPSSA 393
K PQE Y Q + +H S A
Sbjct: 717 KTPQEDYVEAAVKQSLQVHLSGA 739
>UNIPROTKB|B0V0F7 [details] [associations]
symbol:DHX16 "Putative pre-mRNA-splicing factor
ATP-dependent RNA helicase DHX16" species:9606 "Homo sapiens"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] InterPro:IPR002464 PROSITE:PS00690
GO:GO:0005524 GO:GO:0003676 eggNOG:COG1643 GO:GO:0008026
HGNC:HGNC:2739 EMBL:CR759873 IPI:IPI00894447 SMR:B0V0F7
Ensembl:ENST00000456005 UCSC:uc011elj.1 Uniprot:B0V0F7
Length = 188
Score = 295 (108.9 bits), Expect = 2.2e-40, Sum P(2) = 2.2e-40
Identities = 52/111 (46%), Positives = 79/111 (71%)
Query: 231 EPLQRTNRISFPPGLLKQAVKKRPEIKLIVTSATLDAVKFSSYFFEAPIFTIPGRTFPVE 290
E +RT GL+K + RPE+K++V SAT+D +FS++F +AP+F IPGR FPV+
Sbjct: 40 EAHERTLHTDILFGLIKDVARFRPELKVLVASATMDTARFSTFFDDAPVFRIPGRRFPVD 99
Query: 291 VLYTKEPETDYLDASLITVMQIHLREPPGDVLLFLTGKLDVRKQLLGIMDR 341
+ YTK PE DYL+A +++V+QIH+ +PPGD+L+FLTG+ ++ + DR
Sbjct: 100 IFYTKAPEADYLEACVVSVLQIHVTQPPGDILVFLTGQEEIEAACEMLQDR 150
Score = 163 (62.4 bits), Expect = 2.2e-40, Sum P(2) = 2.2e-40
Identities = 28/52 (53%), Positives = 41/52 (78%)
Query: 468 REEIDTACEILYERMKSLGPDVPELIILPVYSALPSEMQTRIFEAAPPGSRK 519
+EEI+ ACE+L +R + LG + EL++LP+Y+ LPS+MQ RIF+ PPG+RK
Sbjct: 137 QEEIEAACEMLQDRCRRLGSKIRELLVLPIYANLPSDMQARIFQPTPPGARK 188
>UNIPROTKB|G4N1N4 [details] [associations]
symbol:MGG_07501 "ATP-dependent RNA helicase DHX8"
species:242507 "Magnaporthe oryzae 70-15" [GO:0005575
"cellular_component" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 GO:GO:0005524 EMBL:CM001233 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 KO:K12813 RefSeq:XP_003711413.1
EnsemblFungi:MGG_07501T0 GeneID:2683421 KEGG:mgr:MGG_07501
Uniprot:G4N1N4
Length = 1016
Score = 435 (158.2 bits), Expect = 7.6e-40, P = 7.6e-40
Identities = 94/222 (42%), Positives = 135/222 (60%)
Query: 11 QMAEFPLEPNLSKMLIMSVHLQCSDEVLTIVSMLSVQN-VFYRPXXXXXXXXXXXXXFNQ 69
QMAEFP +P L+K ++ + C +EVL+IV+MLS + +F+RP F
Sbjct: 788 QMAEFPTDPMLAKAVLAADKEGCVEEVLSIVAMLSEASALFFRPKDKQVHADAARGRFTV 847
Query: 70 MEG-DHITLLAVYNSWRNNKFSNAWCYENFVQIRTLKRAQDVRKQLLGIMDRHKLDVVSA 128
EG DH+TLL ++N W ++ +S W ENF+Q R+L RA+DVR+QL + +R ++ + +
Sbjct: 848 KEGGDHVTLLNIWNQWLDSDYSPIWSKENFLQQRSLTRARDVREQLSKLCERVEVTLSTC 907
Query: 129 G--KNTVRVQKAVCSGFFRNAAKKDPQ-EGYRTLVDSQVVYIHPSSALFNRQP--EWVIY 183
G N +++A+ +GFF NAA+ + YRT+ ++ VYIHPSS + P VIY
Sbjct: 908 GGISNMPPIKRAITAGFFPNAARMQRSGDSYRTVKNNTTVYIHPSSVMMQEDPPPRMVIY 967
Query: 184 HELVQTTKEYMREVTSIDPKWLVEFAPAFFKFSDPTKLSKFK 225
+ELVQTTKEYMR I+PKWL E AP F K D L + K
Sbjct: 968 YELVQTTKEYMRSCMPIEPKWLAELAPHFHKAKDIAALEEKK 1009
Score = 262 (97.3 bits), Expect = 6.5e-40, Sum P(2) = 6.5e-40
Identities = 50/118 (42%), Positives = 77/118 (65%)
Query: 214 KFSDPTKLSKFKKNQRLEPLQRTNRISFPPGLLKQAVKKRPEIKLIVTSATLDAVKFSSY 273
+F LS + E +RT L+K ++R ++KL+++SAT++A KF+SY
Sbjct: 478 EFMTEPDLSSYSALMIDEAHERTVHTDILLALVKDLARERKDLKLLISSATMNAEKFASY 537
Query: 274 FFEAPIFTIPGRTFPVEVLYTKEPETDYLDASLITVMQIHLREPPGDVLLFLTGKLDV 331
F +APIF IPGR +PV++ YT PE +YL A++ TV QIH +P GD+L+FLTG+ ++
Sbjct: 538 FDDAPIFNIPGRRYPVDIYYTPAPEANYLSAAITTVFQIHTTQPKGDILIFLTGQDEI 595
Score = 247 (92.0 bits), Expect = 6.5e-40, Sum P(2) = 6.5e-40
Identities = 55/127 (43%), Positives = 76/127 (59%)
Query: 325 LTGKLDVRKQLLGIMDRHKLDVVSAG--KNTVRVQKAVCSGFFRNAAKKDPQ-EGYRTLV 381
LT DVR+QL + +R ++ + + G N +++A+ +GFF NAA+ + YRT+
Sbjct: 883 LTRARDVREQLSKLCERVEVTLSTCGGISNMPPIKRAITAGFFPNAARMQRSGDSYRTVK 942
Query: 382 DSQVVYIHPSSALFNRQP--EWVIYHELVQTTKEYMREVTSIDPKWLVEFAPAFFKFSDP 439
++ VYIHPSS + P VIY+ELVQTTKEYMR I+PKWL E AP F K D
Sbjct: 943 NNTTVYIHPSSVMMQEDPPPRMVIYYELVQTTKEYMRSCMPIEPKWLAELAPHFHKAKDI 1002
Query: 440 TKLSKFK 446
L + K
Sbjct: 1003 AALEEKK 1009
Score = 218 (81.8 bits), Expect = 7.1e-37, Sum P(2) = 7.1e-37
Identities = 43/75 (57%), Positives = 57/75 (76%)
Query: 468 REEIDTACEILYERMKSLGPDVPELIILPVYSALPSEMQTRIFEAAPPGSRKVVIATNIA 527
++EI+ A + E + LG V EL+I P+Y+ LPSE+Q++IFE P +RKVV+ATNIA
Sbjct: 592 QDEIEAAEMQITETARKLGSRVKELVICPIYANLPSELQSKIFEPTPENARKVVLATNIA 651
Query: 528 ETSLTIDGIFYVVDP 542
ETSLTIDGI YV+DP
Sbjct: 652 ETSLTIDGIVYVIDP 666
>UNIPROTKB|E1BYA5 [details] [associations]
symbol:DHX33 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0000182 "rDNA binding"
evidence=IEA] [GO:0005654 "nucleoplasm" evidence=IEA] [GO:0005730
"nucleolus" evidence=IEA] [GO:0033613 "activating transcription
factor binding" evidence=IEA] [GO:0045943 "positive regulation of
transcription from RNA polymerase I promoter" evidence=IEA]
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408
PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
GO:GO:0005524 GO:GO:0005654 GO:GO:0005730 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 GO:GO:0000182 GO:GO:0045943
GeneTree:ENSGT00700000104241 OMA:APDYFRR EMBL:AADN02025994
IPI:IPI00823199 Ensembl:ENSGALT00000002492 ArrayExpress:E1BYA5
Uniprot:E1BYA5
Length = 660
Score = 425 (154.7 bits), Expect = 1.7e-39, P = 1.7e-39
Identities = 85/214 (39%), Positives = 126/214 (58%)
Query: 2 DSLVVTPISQ-MAEFPLEPNLSKMLIMSVHLQCSDEVLTIVSMLSVQNVFYRPXXXXXXX 60
D LV+TP+ + MA FPLEP SK +++S C++E+LTIVS+LSV +V Y P
Sbjct: 439 DQLVLTPLGRKMAAFPLEPKFSKTILLSPKFHCTEEILTIVSLLSVDSVLYNPPARRDEV 498
Query: 61 XXXXXXFNQMEGDHITLLAVYNSWRNNKFSNAWCYENFVQIRTLKRAQDVRKQLLGIMDR 120
F EGDH+TLL VY +++N + WC ENFV R + DVR QL I +
Sbjct: 499 QSVRKKFISSEGDHLTLLNVYRAFKNVSGNKEWCKENFVNGRNMMLVSDVRAQLRDICVK 558
Query: 121 HKLDVVSAGKNTVRVQKAVCSGFFRNAAKKDPQEGYRTLVDSQVVYIHPSSALFNRQPEW 180
+ + S+ +T +++ + F NAA+ P Y T+ Q+V IHPSS LF+ +P
Sbjct: 559 LSMPMESSRSDTANIRRCLAHSLFMNAAELQPDGTYSTVNSHQLVAIHPSSVLFHCKPSC 618
Query: 181 VIYHELVQTTKEYMREVTSIDPKWLVEFAPAFFK 214
V+Y+ L+ T K YMR++ +D +WL + AP +F+
Sbjct: 619 VVYNGLLHTNKCYMRDLCVVDAEWLYDAAPDYFR 652
Score = 219 (82.2 bits), Expect = 2.4e-30, Sum P(2) = 2.4e-30
Identities = 47/107 (43%), Positives = 69/107 (64%)
Query: 231 EPLQRTNRISFPPGLLKQAVKKRPEI-----KLIVTSATLDAVKFSSYFFEAPIFTIPGR 285
E +RT G++K A KKR E+ K+IV SAT+D +FS YF AP+ + GR
Sbjct: 145 EAHERTIHTDVLFGVVKAAQKKRKELGKLPLKVIVMSATMDVDQFSQYFNGAPVLYLEGR 204
Query: 286 TFPVEVLYTKEPETDYLDASLITVMQIHLREPPG-DVLLFLTGKLDV 331
P++V YTK+P++DYL A+L++V QIH P D+L+FLTG+ ++
Sbjct: 205 QHPIQVFYTKQPQSDYLQAALVSVFQIHQEAPSSQDILVFLTGQEEI 251
Score = 196 (74.1 bits), Expect = 2.4e-30, Sum P(2) = 2.4e-30
Identities = 39/106 (36%), Positives = 63/106 (59%)
Query: 330 DVRKQLLGIMDRHKLDVVSAGKNTVRVQKAVCSGFFRNAAKKDPQEGYRTLVDSQVVYIH 389
DVR QL I + + + S+ +T +++ + F NAA+ P Y T+ Q+V IH
Sbjct: 547 DVRAQLRDICVKLSMPMESSRSDTANIRRCLAHSLFMNAAELQPDGTYSTVNSHQLVAIH 606
Query: 390 PSSALFNRQPEWVIYHELVQTTKEYMREVTSIDPKWLVEFAPAFFK 435
PSS LF+ +P V+Y+ L+ T K YMR++ +D +WL + AP +F+
Sbjct: 607 PSSVLFHCKPSCVVYNGLLHTNKCYMRDLCVVDAEWLYDAAPDYFR 652
Score = 186 (70.5 bits), Expect = 2.7e-29, Sum P(2) = 2.7e-29
Identities = 37/86 (43%), Positives = 58/86 (67%)
Query: 468 REEIDTACEILYERMKSLGPDVPELIILPVYSALPSEMQTRIFEAAPPGSRKVVIATNIA 527
+EEI+ + + K L P++ ++P+Y++LP Q R+F+AAP G RKV+++TNIA
Sbjct: 248 QEEIEAMTKTCRDIAKHLPDGCPQMTVMPLYASLPYSQQLRVFQAAPKGCRKVILSTNIA 307
Query: 528 ETSLTIDGIFYVVDPFDIEVRQAKYH 553
ETS+TI GI YVVD ++ + KY+
Sbjct: 308 ETSITISGIKYVVDTGMVKAK--KYN 331
>UNIPROTKB|G4NHA6 [details] [associations]
symbol:MGG_03893 "Pre-mRNA-splicing factor ATP-dependent
RNA helicase prp43" species:242507 "Magnaporthe oryzae 70-15"
[GO:0005575 "cellular_component" evidence=ND] [GO:0008150
"biological_process" evidence=ND] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 Pfam:PF00271 Pfam:PF04408
PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
GO:GO:0005524 GO:GO:0003676 EMBL:CM001236 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 KO:K12820 RefSeq:XP_003719983.1
EnsemblFungi:MGG_03893T0 GeneID:2677480 KEGG:mgr:MGG_03893
Uniprot:G4NHA6
Length = 779
Score = 410 (149.4 bits), Expect = 7.5e-39, Sum P(2) = 7.5e-39
Identities = 86/218 (39%), Positives = 130/218 (59%)
Query: 6 VTPISQMA-EFPLEPNLSKMLIMSVHLQCSDEVLTIVSMLSVQNVFYRPXXXXXXXXXXX 64
+T + MA E+PL+P L+ ML+ S CS+E+L++ S+LSV VF RP
Sbjct: 526 LTDLGHMASEYPLDPALAVMLVSSPEFYCSNEMLSVTSLLSVPQVFMRPANNRKRADEMK 585
Query: 65 XXFNQMEGDHITLLAVYNSWRNNKFSNA----WCYENFVQIRTLKRAQDVRKQLLGIMDR 120
F MEGDH+TLL Y+++++ WC+E+F+ R L A +VR QL GIM+R
Sbjct: 586 EHFKHMEGDHLTLLNAYHAFKSEMAKGTDMKKWCHEHFLSYRHLSSADNVRAQLKGIMER 645
Query: 121 HKLDVVSA---GKNT-VRVQKAVCSGFFRNAAKKDPQ-EGYRTLVDSQVVYIHPSSALFN 175
L++VS KN +++ + +GFF A ++ + Y T+ D+Q V +HPSS L
Sbjct: 646 QDLELVSTPFTDKNYYTNIRRCLVAGFFMQVALRETSGKVYHTIKDNQNVMLHPSSVL-T 704
Query: 176 RQPEWVIYHELVQTTKEYMREVTSIDPKWLVEFAPAFF 213
EWV+YHE V T+K+Y+R VT I P+WL++ AP ++
Sbjct: 705 TDYEWVLYHEFVLTSKQYIRTVTGIRPEWLIDIAPNYY 742
Score = 277 (102.6 bits), Expect = 4.5e-39, Sum P(2) = 4.5e-39
Identities = 54/101 (53%), Positives = 70/101 (69%)
Query: 231 EPLQRTNRISFPPGLLKQAVKKRPEIKLIVTSATLDAVKFSSYFFEAPIFTIPGRTFPVE 290
E +RT LLKQ +R ++K+I+ SATLDA KF YFFEAPI +PGRT PVE
Sbjct: 230 EAHERTLATDILMALLKQLSLRRSDLKIIIMSATLDAAKFQRYFFEAPILAVPGRTHPVE 289
Query: 291 VLYTKEPETDYLDASLITVMQIHLREPPGDVLLFLTGKLDV 331
+ YT E E DY++AS+ TV+QIH E GD+LLFLTG+ ++
Sbjct: 290 IFYTAEAERDYIEASVRTVLQIHATEAEGDILLFLTGEEEI 330
Score = 219 (82.2 bits), Expect = 4.5e-39, Sum P(2) = 4.5e-39
Identities = 46/110 (41%), Positives = 70/110 (63%)
Query: 330 DVRKQLLGIMDRHKLDVVSA---GKNT-VRVQKAVCSGFFRNAAKKDPQ-EGYRTLVDSQ 384
+VR QL GIM+R L++VS KN +++ + +GFF A ++ + Y T+ D+Q
Sbjct: 634 NVRAQLKGIMERQDLELVSTPFTDKNYYTNIRRCLVAGFFMQVALRETSGKVYHTIKDNQ 693
Query: 385 VVYIHPSSALFNRQPEWVIYHELVQTTKEYMREVTSIDPKWLVEFAPAFF 434
V +HPSS L EWV+YHE V T+K+Y+R VT I P+WL++ AP ++
Sbjct: 694 NVMLHPSSVL-TTDYEWVLYHEFVLTSKQYIRTVTGIRPEWLIDIAPNYY 742
Score = 162 (62.1 bits), Expect = 4.3e-33, Sum P(2) = 4.3e-33
Identities = 39/83 (46%), Positives = 49/83 (59%)
Query: 469 EEIDTACEILYERMKSL--GPDVPELIILPVYSALPSEMQTRIFEAAPP----GSR---K 519
EEI+ C + + L D + + P+Y LP + Q +IF AAPP G R K
Sbjct: 328 EEIEDVCRKVRLEVDELIRDADCGPMEVYPLYGTLPPQQQQKIFNAAPPPLKKGGRPGRK 387
Query: 520 VVIATNIAETSLTIDGIFYVVDP 542
++ATNIAETSLTIDGI YVVDP
Sbjct: 388 CIVATNIAETSLTIDGIVYVVDP 410
Score = 40 (19.1 bits), Expect = 8.1e-14, Sum P(2) = 8.1e-14
Identities = 11/35 (31%), Positives = 19/35 (54%)
Query: 305 SLITVMQIHLREPPGDVLLFLTGKLDVRKQLLGIM 339
S I + + H R D+L+ L +L +R+ L I+
Sbjct: 224 SCIIIDEAHERTLATDILMALLKQLSLRRSDLKII 258
Score = 37 (18.1 bits), Expect = 7.5e-39, Sum P(2) = 7.5e-39
Identities = 7/11 (63%), Positives = 11/11 (100%)
Query: 1 MDSLVVTPISQ 11
++SL+VTPIS+
Sbjct: 424 VESLLVTPISR 434
>UNIPROTKB|D3ZZG1 [details] [associations]
symbol:Dhx35 "Protein Dhx35" species:10116 "Rattus
norvegicus" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 Pfam:PF00271 Pfam:PF04408
PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
RGD:1311165 GO:GO:0005524 GO:GO:0003676 GO:GO:0071013
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 IPI:IPI00951610
Ensembl:ENSRNOT00000068625 OrthoDB:EOG4V9TQ5 ArrayExpress:D3ZZG1
Uniprot:D3ZZG1
Length = 703
Score = 420 (152.9 bits), Expect = 9.2e-39, P = 9.2e-39
Identities = 89/233 (38%), Positives = 141/233 (60%)
Query: 2 DSLVVTPIS-QMAEFPLEPNLSKMLIMSVHLQCSDEVLTIVSMLSVQNVFYRPXXXXXXX 60
D + P+ ++AEFPL P +KML+ S + CS E+L+I +M+ +QNVF P
Sbjct: 472 DCRLTEPLGMRIAEFPLNPMFAKMLLESGNFGCSQEILSIAAMMQIQNVFVFPSNQKSQA 531
Query: 61 XXXXXXFNQMEGDHITLLAVYNSW-RNNKFSNAWCYENFVQIRTLKRAQDVRKQLLGIMD 119
F EGDH+T+L VY ++ ++NK S+ WC E+F+ + L RA VR QL ++
Sbjct: 532 TRVHRKFAVEEGDHLTMLNVYEAFIKHNK-SSQWCQEHFLNYKGLVRAATVRDQLKKLLV 590
Query: 120 RHKLDVVSAGKNTVRVQKAVCSGFFRNAAKKDPQEGYRTLVDSQVVYIHPSSALF-NRQP 178
+ ++ +S+ + V + + SGFF NAA+ YRT+ D ++IHP+S L+ + P
Sbjct: 591 KFQVPKMSSEGDPDPVLRCIVSGFFANAARFHSTGAYRTIRDDHELHIHPASVLYAEKPP 650
Query: 179 EWVIYHELVQTTKEYMREVTSIDPKWLVEFAPAFFKFSDPTKLSKFKKNQRLE 231
WVIY+E++QT+K YMR+VT+I+ WL+E AP F++ T LS K +++
Sbjct: 651 RWVIYNEVIQTSKYYMRDVTAIESAWLLELAPHFYQ--QGTHLSLKAKRAKVQ 701
Score = 224 (83.9 bits), Expect = 3.9e-15, P = 3.9e-15
Identities = 47/123 (38%), Positives = 77/123 (62%)
Query: 331 VRKQLLGIMDRHKLDVVSAGKNTVRVQKAVCSGFFRNAAKKDPQEGYRTLVDSQVVYIHP 390
VR QL ++ + ++ +S+ + V + + SGFF NAA+ YRT+ D ++IHP
Sbjct: 581 VRDQLKKLLVKFQVPKMSSEGDPDPVLRCIVSGFFANAARFHSTGAYRTIRDDHELHIHP 640
Query: 391 SSALF-NRQPEWVIYHELVQTTKEYMREVTSIDPKWLVEFAPAFFKFSDPTKLSKFKKNQ 449
+S L+ + P WVIY+E++QT+K YMR+VT+I+ WL+E AP F++ T LS K
Sbjct: 641 ASVLYAEKPPRWVIYNEVIQTSKYYMRDVTAIESAWLLELAPHFYQ--QGTHLSLKAKRA 698
Query: 450 RLE 452
+++
Sbjct: 699 KVQ 701
Score = 214 (80.4 bits), Expect = 4.9e-14, P = 4.9e-14
Identities = 56/150 (37%), Positives = 85/150 (56%)
Query: 217 DPTKLSKFKKNQRLEPLQRTNRISFPPGLLKQAVKKRPEIKLIVTSATLDAVKFSSYFFE 276
DP L+K+ E +RT GLLK+ KKR +++LIV SATLDA KF +F +
Sbjct: 164 DPL-LTKYSVVMLDEAHERTLYTDIAIGLLKKIQKKRGDLRLIVASATLDAEKFRDFFNQ 222
Query: 277 A----P------IFTIPGRTFPVEVLYTKEPETDYLDASLITVMQIHLREPPGDVLLFLT 326
P I T+ GRTFPV++ Y + P DY+ A++ TV++IH E GD+L FLT
Sbjct: 223 NETSDPARDTCVILTVEGRTFPVDIFYLQSPVPDYIKATVDTVVKIHQTEGDGDILAFLT 282
Query: 327 GKLDVRKQLLGIMDRHKLDVVSAGKNTVRV 356
G+ +V + ++++ + + K +RV
Sbjct: 283 GQEEVETVVSMLIEQARALARTGMKKHLRV 312
Score = 165 (63.1 bits), Expect = 1.1e-08, P = 1.1e-08
Identities = 34/81 (41%), Positives = 52/81 (64%)
Query: 463 AWRISREEIDTACEILYERMKSLGPD--VPELIILPVYSALPSEMQTRIFEAAPPGSRKV 520
A+ +EE++T +L E+ ++L L +LP+Y+ LPS Q ++FE RKV
Sbjct: 279 AFLTGQEEVETVVSMLIEQARALARTGMKKHLRVLPMYAGLPSFEQMKVFERVSHSVRKV 338
Query: 521 VIATNIAETSLTIDGIFYVVD 541
++ATN+AETS+TI GI YV+D
Sbjct: 339 IVATNVAETSITISGIVYVID 359
>UNIPROTKB|E1C4U5 [details] [associations]
symbol:DHX35 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0071013 "catalytic step
2 spliceosome" evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0003676 GO:GO:0071013 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
GeneTree:ENSGT00700000104241 OMA:NIFVVPP EMBL:AADN02019394
IPI:IPI00591771 Ensembl:ENSGALT00000005796 Uniprot:E1C4U5
Length = 705
Score = 419 (152.6 bits), Expect = 1.2e-38, P = 1.2e-38
Identities = 89/233 (38%), Positives = 136/233 (58%)
Query: 1 MDSLVVTPIS-QMAEFPLEPNLSKMLIMSVHLQCSDEVLTIVSMLSVQNVFYRPXXXXXX 59
M + P+ ++AEFPL P +KML+ S + CS E+LTI +M+ +QN+F P
Sbjct: 473 MHCRLTEPLGMRIAEFPLNPMFAKMLLESGNFGCSQEILTIAAMMQIQNIFLIPPNQKSQ 532
Query: 60 XXXXXXXFNQMEGDHITLLAVYNSWRNNKFSNAWCYENFVQIRTLKRAQDVRKQLLGIMD 119
F EGDH+T+L VY ++ + S+ WC E+F+ + L RA VR+QL ++
Sbjct: 533 AARQHRKFAVEEGDHLTMLNVYEAFVKHSKSSQWCQEHFLNYKGLVRASVVREQLKKLLV 592
Query: 120 RHKLDVVSAGKNTVRVQKAVCSGFFRNAAKKDPQEGYRTLVDSQVVYIHPSSALF-NRQP 178
K+ S+ + V + + SGFF NAAK YRT+ D ++IHP+S L+ + P
Sbjct: 593 CFKVPKKSSEGDPDPVLRCIVSGFFANAAKFHSTGAYRTIRDDHELHIHPTSVLYAEKPP 652
Query: 179 EWVIYHELVQTTKEYMREVTSIDPKWLVEFAPAFFKFSDPTKLSKFKKNQRLE 231
WV+Y+E++QT K YMR+VT+I+ WLVE AP F++ T LS K +++
Sbjct: 653 RWVVYNEVIQTAKYYMRDVTAIESAWLVELAPHFYQ--QGTHLSLNAKRAKVD 703
Score = 226 (84.6 bits), Expect = 2.8e-32, Sum P(2) = 2.8e-32
Identities = 49/123 (39%), Positives = 75/123 (60%)
Query: 331 VRKQLLGIMDRHKLDVVSAGKNTVRVQKAVCSGFFRNAAKKDPQEGYRTLVDSQVVYIHP 390
VR+QL ++ K+ S+ + V + + SGFF NAAK YRT+ D ++IHP
Sbjct: 583 VREQLKKLLVCFKVPKKSSEGDPDPVLRCIVSGFFANAAKFHSTGAYRTIRDDHELHIHP 642
Query: 391 SSALF-NRQPEWVIYHELVQTTKEYMREVTSIDPKWLVEFAPAFFKFSDPTKLSKFKKNQ 449
+S L+ + P WV+Y+E++QT K YMR+VT+I+ WLVE AP F++ T LS K
Sbjct: 643 TSVLYAEKPPRWVVYNEVIQTAKYYMRDVTAIESAWLVELAPHFYQ--QGTHLSLNAKRA 700
Query: 450 RLE 452
+++
Sbjct: 701 KVD 703
Score = 208 (78.3 bits), Expect = 2.8e-32, Sum P(2) = 2.8e-32
Identities = 50/126 (39%), Positives = 74/126 (58%)
Query: 216 SDPTKLSKFKKNQRLEPLQRTNRISFPPGLLKQAVKKRPEIKLIVTSATLDAVKFSSYFF 275
+DP L+++ E +RT GLLK+ KKR +++LIV SATLDA KF +F
Sbjct: 163 ADPL-LTRYSVLMLDEAHERTLYTDIAIGLLKKIQKKRGDLRLIVASATLDAEKFRDFFN 221
Query: 276 E----------APIFTIPGRTFPVEVLYTKEPETDYLDASLITVMQIHLREPPGDVLLFL 325
+ + I T+ GRTFPV++ Y + P DY+ +++ T M+IH E GD+L FL
Sbjct: 222 QNDTGDPSKDTSVILTVEGRTFPVDIFYIQSPVPDYIKSTVETAMKIHQMENDGDILAFL 281
Query: 326 TGKLDV 331
TG+ +V
Sbjct: 282 TGQEEV 287
Score = 164 (62.8 bits), Expect = 1.2e-25, Sum P(2) = 1.2e-25
Identities = 35/88 (39%), Positives = 56/88 (63%)
Query: 463 AWRISREEIDTACEILYERMKSLGPDV--PELIILPVYSALPSEMQTRIFEAAPPGSRKV 520
A+ +EE++T +L E+ ++L L +LP+Y+ LPS Q ++FE RKV
Sbjct: 279 AFLTGQEEVETVVSMLIEQARALSRTGMRKHLRVLPMYAGLPSPDQMKVFERVSRSVRKV 338
Query: 521 VIATNIAETSLTIDGIFYVVDPFDIEVR 548
++ATN+AETS+TI GI YV+D +++R
Sbjct: 339 IVATNVAETSITIHGIAYVIDCGFVKLR 366
>CGD|CAL0000153 [details] [associations]
symbol:orf19.1687 species:5476 "Candida albicans" [GO:0030686
"90S preribosome" evidence=IEA] [GO:0071014 "post-mRNA release
spliceosomal complex" evidence=IEA] [GO:0005739 "mitochondrion"
evidence=IEA] [GO:0004004 "ATP-dependent RNA helicase activity"
evidence=IEA] [GO:0000462 "maturation of SSU-rRNA from tricistronic
rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)" evidence=IEA]
[GO:0000466 "maturation of 5.8S rRNA from tricistronic rRNA
transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)" evidence=IEA]
[GO:0000463 "maturation of LSU-rRNA from tricistronic rRNA
transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)" evidence=IEA]
[GO:0000390 "spliceosomal complex disassembly" evidence=IEA]
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408
PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
CGD:CAL0000153 GO:GO:0005524 GO:GO:0003676 EMBL:AACQ01000014
EMBL:AACQ01000013 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
HOGENOM:HOG000175261 KO:K12820 RefSeq:XP_721644.1
RefSeq:XP_721764.1 STRING:Q5AJA5 GeneID:3636669 GeneID:3636709
KEGG:cal:CaO19.1687 KEGG:cal:CaO19.9255 Uniprot:Q5AJA5
Length = 767
Score = 419 (152.6 bits), Expect = 1.8e-38, P = 1.8e-38
Identities = 103/266 (38%), Positives = 155/266 (58%)
Query: 6 VTPISQMA-EFPLEPNLSKMLIMSVHLQCSDEVLTIVSMLSVQNVFYRPXXXXXXXXXXX 64
+T + ++A +FPL+P L+ MLI S CS+E+LTIV+MLSV NVF RP
Sbjct: 513 LTALGRLASQFPLDPMLAVMLIGSPAYSCSEEILTIVAMLSVPNVFVRPASARKRADEAK 572
Query: 65 XXFNQMEGDHITLLAVYNSWRNNKFS----NAWCYENFVQIRTLKRAQDVRKQLLGIMDR 120
F Q +GDH+TL+ VY ++ + + S + WC +NF+ R+L A++VR QL +M +
Sbjct: 573 LSFAQADGDHLTLINVYEAFISPEASEIGTHKWCRDNFLSYRSLTSAKNVRNQLQRLMQK 632
Query: 121 HKLDVVSAGKNTV-------RVQKAVCSGFFRNAAKKDP-QEGYRTLVDSQVVYIHPSSA 172
+ L ++S N V V+KA+ +GFF AKK +GY T+ D+Q V IHPS+
Sbjct: 633 YDLQLISQ-YNQVSEFEYWENVKKALVAGFFMQVAKKKSGNKGYLTVKDNQDVLIHPSTV 691
Query: 173 LFNRQPEWVIYHELVQTTKEYMREVTSIDPKWLVEFAPAFFKFSDPTKLSKFKKNQRLEP 232
L +++ EW+IY+E V T+K Y+R VT + P+WLVE AP ++ L F K
Sbjct: 692 L-SKEGEWLIYNEFVLTSKNYIRTVTVVKPEWLVEIAPKYYN------LDHFAKGDVKLS 744
Query: 233 LQRT-NRISFPPGLLKQAVKKRPEIK 257
L+R R+ G +K+ KK+ + K
Sbjct: 745 LERVVERV----GNMKKLDKKKKKSK 766
Score = 272 (100.8 bits), Expect = 1.3e-38, Sum P(2) = 1.3e-38
Identities = 53/101 (52%), Positives = 71/101 (70%)
Query: 231 EPLQRTNRISFPPGLLKQAVKKRPEIKLIVTSATLDAVKFSSYFFEAPIFTIPGRTFPVE 290
E +RT GLLKQ +RP++K+I+ SATLDA KF +YF AP+ +PGRT PVE
Sbjct: 217 EAHERTLATDILMGLLKQVSVRRPDLKIIIMSATLDAEKFQNYFNNAPLLAVPGRTHPVE 276
Query: 291 VLYTKEPETDYLDASLITVMQIHLREPPGDVLLFLTGKLDV 331
+ YT E + DYLDA++ TV+QIH E GD+LLFLTG+ ++
Sbjct: 277 IYYTPEFQRDYLDAAIRTVLQIHATEGEGDILLFLTGEEEI 317
Score = 220 (82.5 bits), Expect = 1.3e-38, Sum P(2) = 1.3e-38
Identities = 50/118 (42%), Positives = 74/118 (62%)
Query: 325 LTGKLDVRKQLLGIMDRHKLDVVSAGKNTV-------RVQKAVCSGFFRNAAKKDP-QEG 376
LT +VR QL +M ++ L ++S N V V+KA+ +GFF AKK +G
Sbjct: 616 LTSAKNVRNQLQRLMQKYDLQLISQ-YNQVSEFEYWENVKKALVAGFFMQVAKKKSGNKG 674
Query: 377 YRTLVDSQVVYIHPSSALFNRQPEWVIYHELVQTTKEYMREVTSIDPKWLVEFAPAFF 434
Y T+ D+Q V IHPS+ L +++ EW+IY+E V T+K Y+R VT + P+WLVE AP ++
Sbjct: 675 YLTVKDNQDVLIHPSTVL-SKEGEWLIYNEFVLTSKNYIRTVTVVKPEWLVEIAPKYY 731
Score = 163 (62.4 bits), Expect = 1.2e-32, Sum P(2) = 1.2e-32
Identities = 45/88 (51%), Positives = 55/88 (62%)
Query: 469 EEIDTAC-EILYE-----RMKSLGPDVPELIILPVYSALPSEMQTRIFEAAP-------- 514
EEI+ AC +I E R ++ GP L + P+Y +LP Q +IFE AP
Sbjct: 315 EEIEDACRKISLEGDELVREQNCGP----LKVYPLYGSLPPHQQQKIFEPAPTNPNPNGR 370
Query: 515 PGSRKVVIATNIAETSLTIDGIFYVVDP 542
PG RKV+I+TNIAETSLTIDGI YVVDP
Sbjct: 371 PG-RKVIISTNIAETSLTIDGIVYVVDP 397
>UNIPROTKB|E1BDN4 [details] [associations]
symbol:DHX35 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0071013 "catalytic step 2 spliceosome" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0003676 GO:GO:0071013 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
GeneTree:ENSGT00700000104241 KO:K13117 OMA:NIFVVPP CTD:60625
EMBL:DAAA02036576 EMBL:DAAA02036577 EMBL:DAAA02036578
IPI:IPI00707123 RefSeq:NP_001179272.1 UniGene:Bt.52291
Ensembl:ENSBTAT00000005281 GeneID:513148 KEGG:bta:513148
NextBio:20870723 Uniprot:E1BDN4
Length = 703
Score = 416 (151.5 bits), Expect = 2.5e-38, P = 2.5e-38
Identities = 89/233 (38%), Positives = 140/233 (60%)
Query: 2 DSLVVTPIS-QMAEFPLEPNLSKMLIMSVHLQCSDEVLTIVSMLSVQNVFYRPXXXXXXX 60
D + P+ ++AEFPL P +KML+ S + CS E+L+I +M+ +QNVF P
Sbjct: 472 DCRLTEPLGMRIAEFPLNPMFAKMLLESGNFGCSQEILSIAAMMQIQNVFVVPSNQKSQA 531
Query: 61 XXXXXXFNQMEGDHITLLAVYNSW-RNNKFSNAWCYENFVQIRTLKRAQDVRKQLLGIMD 119
F EGDH+T+L VY ++ ++NK S WC E+F+ + L RA VR+QL ++
Sbjct: 532 IRAHRKFAVEEGDHLTMLNVYEAFIKHNKNSQ-WCQEHFLNYKGLVRAATVREQLKKLLV 590
Query: 120 RHKLDVVSAGKNTVRVQKAVCSGFFRNAAKKDPQEGYRTLVDSQVVYIHPSSALF-NRQP 178
+ ++ S+ + V + + SGFF NAA+ YRT+ D ++IHP+S L+ + P
Sbjct: 591 KFQVPKKSSEGDPDPVLRCIVSGFFANAARFHSTGAYRTIRDDHELHIHPASVLYAEKPP 650
Query: 179 EWVIYHELVQTTKEYMREVTSIDPKWLVEFAPAFFKFSDPTKLSKFKKNQRLE 231
WVIY+E++QT+K YMR+VT+I+ WL+E AP F++ T LS K +++
Sbjct: 651 RWVIYNEVIQTSKYYMRDVTAIESAWLLELAPHFYQ--QGTHLSLRAKRAKVQ 701
Score = 223 (83.6 bits), Expect = 1.8e-32, Sum P(2) = 1.8e-32
Identities = 47/123 (38%), Positives = 77/123 (62%)
Query: 331 VRKQLLGIMDRHKLDVVSAGKNTVRVQKAVCSGFFRNAAKKDPQEGYRTLVDSQVVYIHP 390
VR+QL ++ + ++ S+ + V + + SGFF NAA+ YRT+ D ++IHP
Sbjct: 581 VREQLKKLLVKFQVPKKSSEGDPDPVLRCIVSGFFANAARFHSTGAYRTIRDDHELHIHP 640
Query: 391 SSALF-NRQPEWVIYHELVQTTKEYMREVTSIDPKWLVEFAPAFFKFSDPTKLSKFKKNQ 449
+S L+ + P WVIY+E++QT+K YMR+VT+I+ WL+E AP F++ T LS K
Sbjct: 641 ASVLYAEKPPRWVIYNEVIQTSKYYMRDVTAIESAWLLELAPHFYQ--QGTHLSLRAKRA 698
Query: 450 RLE 452
+++
Sbjct: 699 KVQ 701
Score = 213 (80.0 bits), Expect = 1.8e-32, Sum P(2) = 1.8e-32
Identities = 53/125 (42%), Positives = 73/125 (58%)
Query: 217 DPTKLSKFKKNQRLEPLQRTNRISFPPGLLKQAVKKRPEIKLIVTSATLDAVKFSSYF-- 274
DP L+K+ E +RT GLLK+ KKR +++LIV SATLDA KF +F
Sbjct: 164 DPL-LTKYSAIMLDEAHERTLYTDIAIGLLKKIQKKRGDLRLIVASATLDAEKFRDFFNH 222
Query: 275 --FEAP------IFTIPGRTFPVEVLYTKEPETDYLDASLITVMQIHLREPPGDVLLFLT 326
P I T+ GRTFPV++ Y + P DY+ +++ TVM+IH E GD+L FLT
Sbjct: 223 NDTSDPTRDTCVILTVEGRTFPVDIFYLQSPVPDYIKSTVETVMKIHQTEGDGDILAFLT 282
Query: 327 GKLDV 331
G+ +V
Sbjct: 283 GQEEV 287
Score = 173 (66.0 bits), Expect = 3.7e-27, Sum P(2) = 3.7e-27
Identities = 37/88 (42%), Positives = 58/88 (65%)
Query: 463 AWRISREEIDTACEILYERMKSLGPDVPE--LIILPVYSALPSEMQTRIFEAAPPGSRKV 520
A+ +EE++T +L E+ ++LG + L ILP+Y+ LPS Q ++FE RKV
Sbjct: 279 AFLTGQEEVETVVSMLIEQARALGQTGMKRHLRILPMYAGLPSFEQMKVFERVSRSVRKV 338
Query: 521 VIATNIAETSLTIDGIFYVVDPFDIEVR 548
++ATN+AETS+TI GI YV+D +++R
Sbjct: 339 IVATNVAETSITISGIVYVIDCGFVKLR 366
>UNIPROTKB|F5GXM6 [details] [associations]
symbol:DHX35 "Probable ATP-dependent RNA helicase DHX35"
species:9606 "Homo sapiens" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR007502
Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194
SMART:SM00490 SMART:SM00847 GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 KO:K13117 EMBL:AL023803
UniGene:Hs.444520 DNASU:60625 GeneID:60625 KEGG:hsa:60625 CTD:60625
HGNC:HGNC:15861 GenomeRNAi:60625 NextBio:65461 IPI:IPI00513682
RefSeq:NP_001177738.1 ProteinModelPortal:F5GXM6 SMR:F5GXM6
Ensembl:ENST00000373323 UCSC:uc010zwc.2 ArrayExpress:F5GXM6
Bgee:F5GXM6 Uniprot:F5GXM6
Length = 672
Score = 411 (149.7 bits), Expect = 7.1e-38, P = 7.1e-38
Identities = 89/235 (37%), Positives = 142/235 (60%)
Query: 2 DSLVVTPIS-QMAEFPLEPNLSKMLIMSVHLQCSDEVLTIVSMLSVQNVFYRPXXXXXXX 60
D + P+ ++AEFPL P +KML+ S + CS E+L+I +M+ +QN+F P
Sbjct: 441 DCRLTEPLGMRIAEFPLNPMFAKMLLESGNFGCSQEILSIAAMMQIQNIFVVPPNQKSHA 500
Query: 61 XXXXXXFNQMEGDHITLLAVYNSW-RNNKFSNAWCYENFVQIRTLKRAQDVRKQLLGIMD 119
F EGDH+T+L +Y ++ ++NK S WC E+F+ + L RA VR+QL ++
Sbjct: 501 IRVHRKFAVEEGDHLTMLNIYEAFIKHNKDSK-WCQEHFLNYKGLVRAATVREQLKKLLV 559
Query: 120 RHKLDVVSAGKNTVRVQKAVCSGFFRNAAKKDPQEGYRTLVDSQVVYIHPSSALF-NRQP 178
+ ++ S+ + V + + SGFF NAA+ YRT+ D ++IHP+S L+ + P
Sbjct: 560 KFQVPRKSSEGDPDLVLRCIVSGFFANAARFHSTGAYRTIRDDHELHIHPASVLYAEKPP 619
Query: 179 EWVIYHELVQTTKEYMREVTSIDPKWLVEFAPAFFKFSDPTKLS-KFKKNQRLEP 232
WVIY+E++QT+K YMR+VT+I+ WL+E AP F++ T LS K K+ + +P
Sbjct: 620 RWVIYNEVIQTSKYYMRDVTAIESAWLLELAPHFYQ--QGTHLSLKAKRAKVQDP 672
Score = 223 (83.6 bits), Expect = 4.6e-15, P = 4.6e-15
Identities = 49/125 (39%), Positives = 79/125 (63%)
Query: 331 VRKQLLGIMDRHKLDVVSAGKNTVRVQKAVCSGFFRNAAKKDPQEGYRTLVDSQVVYIHP 390
VR+QL ++ + ++ S+ + V + + SGFF NAA+ YRT+ D ++IHP
Sbjct: 550 VREQLKKLLVKFQVPRKSSEGDPDLVLRCIVSGFFANAARFHSTGAYRTIRDDHELHIHP 609
Query: 391 SSALF-NRQPEWVIYHELVQTTKEYMREVTSIDPKWLVEFAPAFFKFSDPTKLS-KFKKN 448
+S L+ + P WVIY+E++QT+K YMR+VT+I+ WL+E AP F++ T LS K K+
Sbjct: 610 ASVLYAEKPPRWVIYNEVIQTSKYYMRDVTAIESAWLLELAPHFYQ--QGTHLSLKAKRA 667
Query: 449 QRLEP 453
+ +P
Sbjct: 668 KVQDP 672
Score = 211 (79.3 bits), Expect = 9.6e-14, P = 9.6e-14
Identities = 56/150 (37%), Positives = 85/150 (56%)
Query: 217 DPTKLSKFKKNQRLEPLQRTNRISFPPGLLKQAVKKRPEIKLIVTSATLDAVKFSSYFFE 276
DP L+K+ E +RT GLLK+ KKR +++LIV SATLDA KF +F +
Sbjct: 133 DPL-LTKYSVIMLDEAHERTLYTDIAIGLLKKIQKKRGDLRLIVASATLDADKFRDFFNQ 191
Query: 277 A----P------IFTIPGRTFPVEVLYTKEPETDYLDASLITVMQIHLREPPGDVLLFLT 326
P I T+ GRTFPV++ Y + P DY+ +++ TV++IH E GDVL FLT
Sbjct: 192 NETSDPARDTCVILTVEGRTFPVDIFYLQSPVPDYIKSTVETVVKIHQTEGDGDVLAFLT 251
Query: 327 GKLDVRKQLLGIMDRHKLDVVSAGKNTVRV 356
G+ +V + ++++ + + K +RV
Sbjct: 252 GQEEVETVVSMLIEQARALARTGMKRHLRV 281
Score = 165 (63.1 bits), Expect = 1.0e-08, P = 1.0e-08
Identities = 35/88 (39%), Positives = 57/88 (64%)
Query: 463 AWRISREEIDTACEILYERMKSLGPDVPE--LIILPVYSALPSEMQTRIFEAAPPGSRKV 520
A+ +EE++T +L E+ ++L + L +LP+Y+ LPS Q ++FE RKV
Sbjct: 248 AFLTGQEEVETVVSMLIEQARALARTGMKRHLRVLPMYAGLPSFEQMKVFERVSRSVRKV 307
Query: 521 VIATNIAETSLTIDGIFYVVDPFDIEVR 548
++ATN+AETS+TI GI YV+D +++R
Sbjct: 308 IVATNVAETSITISGIVYVIDCGFVKLR 335
>UNIPROTKB|Q9H5Z1 [details] [associations]
symbol:DHX35 "Probable ATP-dependent RNA helicase DHX35"
species:9606 "Homo sapiens" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0000398
"mRNA splicing, via spliceosome" evidence=IC] [GO:0071013
"catalytic step 2 spliceosome" evidence=IDA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 Pfam:PF00271 Pfam:PF04408
PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
GO:GO:0005524 EMBL:CH471077 GO:GO:0003676 GO:GO:0000398
GO:GO:0071013 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
HOGENOM:HOG000175261 HOVERGEN:HBG039428 KO:K13117 OMA:NIFVVPP
EMBL:AK026412 EMBL:AK025541 EMBL:AL023803 EMBL:BC132669
IPI:IPI00030288 RefSeq:NP_068750.2 UniGene:Hs.444520
ProteinModelPortal:Q9H5Z1 SMR:Q9H5Z1 IntAct:Q9H5Z1
PhosphoSite:Q9H5Z1 DMDM:20137971 PRIDE:Q9H5Z1 DNASU:60625
Ensembl:ENST00000252011 GeneID:60625 KEGG:hsa:60625 UCSC:uc002xjh.3
CTD:60625 GeneCards:GC20P037590 HGNC:HGNC:15861 neXtProt:NX_Q9H5Z1
PharmGKB:PA27222 InParanoid:Q9H5Z1 PhylomeDB:Q9H5Z1
GenomeRNAi:60625 NextBio:65461 ArrayExpress:Q9H5Z1 Bgee:Q9H5Z1
CleanEx:HS_DHX35 Genevestigator:Q9H5Z1 GermOnline:ENSG00000101452
Uniprot:Q9H5Z1
Length = 703
Score = 411 (149.7 bits), Expect = 9.0e-38, P = 9.0e-38
Identities = 89/235 (37%), Positives = 142/235 (60%)
Query: 2 DSLVVTPIS-QMAEFPLEPNLSKMLIMSVHLQCSDEVLTIVSMLSVQNVFYRPXXXXXXX 60
D + P+ ++AEFPL P +KML+ S + CS E+L+I +M+ +QN+F P
Sbjct: 472 DCRLTEPLGMRIAEFPLNPMFAKMLLESGNFGCSQEILSIAAMMQIQNIFVVPPNQKSHA 531
Query: 61 XXXXXXFNQMEGDHITLLAVYNSW-RNNKFSNAWCYENFVQIRTLKRAQDVRKQLLGIMD 119
F EGDH+T+L +Y ++ ++NK S WC E+F+ + L RA VR+QL ++
Sbjct: 532 IRVHRKFAVEEGDHLTMLNIYEAFIKHNKDSK-WCQEHFLNYKGLVRAATVREQLKKLLV 590
Query: 120 RHKLDVVSAGKNTVRVQKAVCSGFFRNAAKKDPQEGYRTLVDSQVVYIHPSSALF-NRQP 178
+ ++ S+ + V + + SGFF NAA+ YRT+ D ++IHP+S L+ + P
Sbjct: 591 KFQVPRKSSEGDPDLVLRCIVSGFFANAARFHSTGAYRTIRDDHELHIHPASVLYAEKPP 650
Query: 179 EWVIYHELVQTTKEYMREVTSIDPKWLVEFAPAFFKFSDPTKLS-KFKKNQRLEP 232
WVIY+E++QT+K YMR+VT+I+ WL+E AP F++ T LS K K+ + +P
Sbjct: 651 RWVIYNEVIQTSKYYMRDVTAIESAWLLELAPHFYQ--QGTHLSLKAKRAKVQDP 703
Score = 223 (83.6 bits), Expect = 5.0e-15, P = 5.0e-15
Identities = 49/125 (39%), Positives = 79/125 (63%)
Query: 331 VRKQLLGIMDRHKLDVVSAGKNTVRVQKAVCSGFFRNAAKKDPQEGYRTLVDSQVVYIHP 390
VR+QL ++ + ++ S+ + V + + SGFF NAA+ YRT+ D ++IHP
Sbjct: 581 VREQLKKLLVKFQVPRKSSEGDPDLVLRCIVSGFFANAARFHSTGAYRTIRDDHELHIHP 640
Query: 391 SSALF-NRQPEWVIYHELVQTTKEYMREVTSIDPKWLVEFAPAFFKFSDPTKLS-KFKKN 448
+S L+ + P WVIY+E++QT+K YMR+VT+I+ WL+E AP F++ T LS K K+
Sbjct: 641 ASVLYAEKPPRWVIYNEVIQTSKYYMRDVTAIESAWLLELAPHFYQ--QGTHLSLKAKRA 698
Query: 449 QRLEP 453
+ +P
Sbjct: 699 KVQDP 703
Score = 211 (79.3 bits), Expect = 1.0e-13, P = 1.0e-13
Identities = 56/150 (37%), Positives = 85/150 (56%)
Query: 217 DPTKLSKFKKNQRLEPLQRTNRISFPPGLLKQAVKKRPEIKLIVTSATLDAVKFSSYFFE 276
DP L+K+ E +RT GLLK+ KKR +++LIV SATLDA KF +F +
Sbjct: 164 DPL-LTKYSVIMLDEAHERTLYTDIAIGLLKKIQKKRGDLRLIVASATLDADKFRDFFNQ 222
Query: 277 A----P------IFTIPGRTFPVEVLYTKEPETDYLDASLITVMQIHLREPPGDVLLFLT 326
P I T+ GRTFPV++ Y + P DY+ +++ TV++IH E GDVL FLT
Sbjct: 223 NETSDPARDTCVILTVEGRTFPVDIFYLQSPVPDYIKSTVETVVKIHQTEGDGDVLAFLT 282
Query: 327 GKLDVRKQLLGIMDRHKLDVVSAGKNTVRV 356
G+ +V + ++++ + + K +RV
Sbjct: 283 GQEEVETVVSMLIEQARALARTGMKRHLRV 312
Score = 165 (63.1 bits), Expect = 1.1e-08, P = 1.1e-08
Identities = 35/88 (39%), Positives = 57/88 (64%)
Query: 463 AWRISREEIDTACEILYERMKSLGPDVPE--LIILPVYSALPSEMQTRIFEAAPPGSRKV 520
A+ +EE++T +L E+ ++L + L +LP+Y+ LPS Q ++FE RKV
Sbjct: 279 AFLTGQEEVETVVSMLIEQARALARTGMKRHLRVLPMYAGLPSFEQMKVFERVSRSVRKV 338
Query: 521 VIATNIAETSLTIDGIFYVVDPFDIEVR 548
++ATN+AETS+TI GI YV+D +++R
Sbjct: 339 IVATNVAETSITISGIVYVIDCGFVKLR 366
>DICTYBASE|DDB_G0269306 [details] [associations]
symbol:dhx35 "DEAD/DEAH box helicase" species:44689
"Dictyostelium discoideum" [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0016787 "hydrolase activity"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR007502
Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194
SMART:SM00490 SMART:SM00847 dictyBase:DDB_G0269306 GO:GO:0005524
EMBL:AAFI02000005 GenomeReviews:CM000150_GR GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026 KO:K13117 OMA:NIFVVPP
RefSeq:XP_645858.1 ProteinModelPortal:Q55EC3
EnsemblProtists:DDB0233419 GeneID:8616802 KEGG:ddi:DDB_G0269306
InParanoid:Q55EC3 Uniprot:Q55EC3
Length = 716
Score = 410 (149.4 bits), Expect = 1.3e-37, P = 1.3e-37
Identities = 84/214 (39%), Positives = 129/214 (60%)
Query: 12 MAEFPLEPNLSKMLIMSVH--LQCSDEVLTIVSMLSVQNVFYRPXXXXXXXXXXXXXFNQ 69
MAEFP +P SKM+I S CSDE +TI +ML++Q +F
Sbjct: 507 MAEFPTDPTFSKMIIQSSSNGFNCSDECITITAMLNIQGLFTNQNHKSRKHLLVK----- 561
Query: 70 MEGDHITLLAVYNSWRNNKFSNAWCYENFVQIRTLKRAQDVRKQLLGIMDRHKLDVVSA- 128
EGDH+TLL ++NS+ +N+ S WC ++ + + ++R VRKQLL ++ ++V+S
Sbjct: 562 -EGDHLTLLNIFNSFISNQSSPQWCNQHQINYKAMQRVLQVRKQLLAYAKKYSINVISCF 620
Query: 129 GKNTVR------VQKAVCSGFFRNAAKKDPQEGYRTLVDSQVVYIHPSSAL-FNRQPEWV 181
N R ++KA+ SGFF NAA+ P Y+T+ + +++HP+S L + P+WV
Sbjct: 621 DSNNNREQCSNLIRKAIVSGFFTNAAQLQPDGSYQTIREKHKLWLHPTSVLCLSNSPQWV 680
Query: 182 IYHELVQTTKEYMREVTSIDPKWLVEFAPAFFKF 215
I++E+ TTKEYM++VTSI+P WL E AP ++KF
Sbjct: 681 IFNEVTITTKEYMKDVTSIEPNWLFEIAPHYYKF 714
Score = 254 (94.5 bits), Expect = 1.9e-31, Sum P(2) = 1.9e-31
Identities = 50/116 (43%), Positives = 76/116 (65%)
Query: 329 LDVRKQLLGIMDRHKLDVVSA-GKNTVR------VQKAVCSGFFRNAAKKDPQEGYRTLV 381
L VRKQLL ++ ++V+S N R ++KA+ SGFF NAA+ P Y+T+
Sbjct: 599 LQVRKQLLAYAKKYSINVISCFDSNNNREQCSNLIRKAIVSGFFTNAAQLQPDGSYQTIR 658
Query: 382 DSQVVYIHPSSAL-FNRQPEWVIYHELVQTTKEYMREVTSIDPKWLVEFAPAFFKF 436
+ +++HP+S L + P+WVI++E+ TTKEYM++VTSI+P WL E AP ++KF
Sbjct: 659 EKHKLWLHPTSVLCLSNSPQWVIFNEVTITTKEYMKDVTSIEPNWLFEIAPHYYKF 714
Score = 170 (64.9 bits), Expect = 1.9e-31, Sum P(2) = 1.9e-31
Identities = 34/99 (34%), Positives = 64/99 (64%)
Query: 256 IKLIVTSATLDAVKFSSYFF----------EAPIFTIPGRTFPVEVLYTKEPETDYLDAS 305
+KLI++SATL+A F ++F + I +I GRT+PV++ Y +E ++Y+ +
Sbjct: 214 LKLIISSATLNANDFFNFFNYNQTNDKSKDTSTILSIEGRTYPVDIHYLEESTSNYIQTT 273
Query: 306 LITVMQIHLREPPGDVLLFLTGKLDVRKQLLGIMDRHKL 344
+ T++ IH +PPGD+L+FLTG+ ++ K + + D+ ++
Sbjct: 274 IQTIIDIHTTQPPGDILVFLTGQEEIEKLIQTLDDKFEI 312
Score = 132 (51.5 bits), Expect = 4.4e-18, Sum P(2) = 4.4e-18
Identities = 26/50 (52%), Positives = 36/50 (72%)
Query: 494 ILPVYSALPSEMQTRIFEAAPPGS--RKVVIATNIAETSLTIDGIFYVVD 541
+LP+YS L Q ++FE+ RK++I+TNIAETS+TIDG+ YVVD
Sbjct: 333 LLPMYSGLSINKQIKVFESVGDSKKIRKIIISTNIAETSITIDGVVYVVD 382
Score = 57 (25.1 bits), Expect = 1.2e-19, Sum P(2) = 1.2e-19
Identities = 23/68 (33%), Positives = 34/68 (50%)
Query: 217 DPTKLSKFKKNQRLEPLQRTNRISFPPGLLKQAVKKRPE----------IKLIVTSATLD 266
DP L K+ E +R+ + GLLK+ KKR +KLI++SATL+
Sbjct: 166 DPLLL-KYSVIMIDEAHERSLQTDLLMGLLKKVQKKRNSTNNNNNNDNSLKLIISSATLN 224
Query: 267 AVKFSSYF 274
A F ++F
Sbjct: 225 ANDFFNFF 232
>UNIPROTKB|F1SDW0 [details] [associations]
symbol:DHX35 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0071013 "catalytic step 2 spliceosome" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0003676 GO:GO:0071013 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
GeneTree:ENSGT00700000104241 OMA:NIFVVPP EMBL:CU442751
Ensembl:ENSSSCT00000008044 Uniprot:F1SDW0
Length = 719
Score = 409 (149.0 bits), Expect = 1.7e-37, P = 1.7e-37
Identities = 84/216 (38%), Positives = 133/216 (61%)
Query: 2 DSLVVTPIS-QMAEFPLEPNLSKMLIMSVHLQCSDEVLTIVSMLSVQNVFYRPXXXXXXX 60
D + P+ ++AEFPL P +KML+ S + CS E+L+I +M+ +QN+F P
Sbjct: 472 DCRLTEPLGMRIAEFPLNPMFAKMLLESGNFGCSQEILSIAAMMQIQNIFVVPSNQKSQA 531
Query: 61 XXXXXXFNQMEGDHITLLAVYNSW-RNNKFSNAWCYENFVQIRTLKRAQDVRKQLLGIMD 119
F EGDH+T+L VY ++ ++NK S WC E+F+ + L RA VR+QL ++
Sbjct: 532 IRVHRKFAVEEGDHLTMLNVYEAFIKHNKNSQ-WCQEHFLNYKGLVRAATVREQLKKLLV 590
Query: 120 RHKLDVVSAGKNTVRVQKAVCSGFFRNAAKKDPQEGYRTLVDSQVVYIHPSSALF-NRQP 178
+ ++ S+ + V + + SGFF NAA+ YRT+ D ++IHP+S L+ + P
Sbjct: 591 KFQVPKKSSEGDPDPVLRCIVSGFFANAARFHSTGVYRTIRDDHELHIHPASVLYAEKPP 650
Query: 179 EWVIYHELVQTTKEYMREVTSIDPKWLVEFAPAFFK 214
WVIY+E++QT+K YMR+VT+I+ WL+E AP F++
Sbjct: 651 RWVIYNEVIQTSKYYMRDVTAIESAWLLELAPHFYQ 686
Score = 218 (81.8 bits), Expect = 3.4e-32, Sum P(2) = 3.4e-32
Identities = 43/106 (40%), Positives = 70/106 (66%)
Query: 331 VRKQLLGIMDRHKLDVVSAGKNTVRVQKAVCSGFFRNAAKKDPQEGYRTLVDSQVVYIHP 390
VR+QL ++ + ++ S+ + V + + SGFF NAA+ YRT+ D ++IHP
Sbjct: 581 VREQLKKLLVKFQVPKKSSEGDPDPVLRCIVSGFFANAARFHSTGVYRTIRDDHELHIHP 640
Query: 391 SSALF-NRQPEWVIYHELVQTTKEYMREVTSIDPKWLVEFAPAFFK 435
+S L+ + P WVIY+E++QT+K YMR+VT+I+ WL+E AP F++
Sbjct: 641 ASVLYAEKPPRWVIYNEVIQTSKYYMRDVTAIESAWLLELAPHFYQ 686
Score = 216 (81.1 bits), Expect = 3.4e-32, Sum P(2) = 3.4e-32
Identities = 53/125 (42%), Positives = 74/125 (59%)
Query: 217 DPTKLSKFKKNQRLEPLQRTNRISFPPGLLKQAVKKRPEIKLIVTSATLDAVKFSSYF-- 274
DP L+K+ E +RT GLLK+ KKR +++LIV SATLDA KF +F
Sbjct: 164 DPL-LTKYSAIMLDEAHERTLYTDIAIGLLKKIQKKRGDLRLIVASATLDAEKFRDFFNQ 222
Query: 275 ---FEAP-----IFTIPGRTFPVEVLYTKEPETDYLDASLITVMQIHLREPPGDVLLFLT 326
+ P I T+ GRTFPV++ Y + P DY+ +++ TVM+IH E GD+L FLT
Sbjct: 223 NDTSDPPRDTCVILTVEGRTFPVDIFYLQSPVPDYIKSTVETVMKIHQTEGDGDILAFLT 282
Query: 327 GKLDV 331
G+ +V
Sbjct: 283 GQEEV 287
Score = 171 (65.3 bits), Expect = 3.0e-27, Sum P(2) = 3.0e-27
Identities = 36/88 (40%), Positives = 58/88 (65%)
Query: 463 AWRISREEIDTACEILYERMKSLGPDVPE--LIILPVYSALPSEMQTRIFEAAPPGSRKV 520
A+ +EE++T +L E+ ++LG + L +LP+Y+ LPS Q ++FE RKV
Sbjct: 279 AFLTGQEEVETVVSMLIEQARALGRTGMKRHLRVLPMYAGLPSFEQMKVFERVSRSVRKV 338
Query: 521 VIATNIAETSLTIDGIFYVVDPFDIEVR 548
++ATN+AETS+TI GI YV+D +++R
Sbjct: 339 IVATNVAETSITISGIVYVIDCGFVKLR 366
>DICTYBASE|DDB_G0270110 [details] [associations]
symbol:dhx33 "DEAD/DEAH box helicase" species:44689
"Dictyostelium discoideum" [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0016787 "hydrolase activity"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408
PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
dictyBase:DDB_G0270110 GO:GO:0005524 EMBL:AAFI02000005
GenomeReviews:CM000150_GR GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 KO:K14781 RefSeq:XP_646548.1
EnsemblProtists:DDB0233404 GeneID:8617514 KEGG:ddi:DDB_G0270110
InParanoid:Q55CD3 OMA:EICINRE Uniprot:Q55CD3
Length = 730
Score = 401 (146.2 bits), Expect = 1.3e-36, P = 1.3e-36
Identities = 78/221 (35%), Positives = 135/221 (61%)
Query: 11 QMAEFPLEPNLSKMLIMSVHLQCSDEVLTIVSMLSVQNVFYRPXXXXXXXXXXXXXFNQM 70
+MA FPL+P SK LI S+ +CS+EVL I+S+LSV+++F+ P F
Sbjct: 501 KMALFPLDPMYSKTLIKSIEFECSEEVLIIISILSVESIFFTPKEKKKEVEDVKKIFFSP 560
Query: 71 EGDHITLLAVYNSWRNNK--FSNAWCYENFVQIRTLKRAQDVRKQLLGIMDRHKLDVVSA 128
+GDHIT L V+ ++ +K WC+++F+ ++++ + +V +QL+ KL +VS
Sbjct: 561 DGDHITFLNVFREFQKSKPQQQQQWCFDHFINLKSMIKVLNVFEQLVKYCISLKLPIVSC 620
Query: 129 GKNTVRVQKAVCSGFFRNAAKKDPQEGYRTLVDSQVVYIHPSSALFNRQPEWVIYHELVQ 188
G + R++K+ GFF N A P + Y+T+VD++ + IHP+S LF+++P+ ++Y+EL
Sbjct: 621 GSDFDRIKKSFIGGFFLNTAILQPDKKYKTMVDNKEIQIHPTSFLFDQKPQHILYNELTI 680
Query: 189 TTKEYMREVTSIDPKWLVEFAPAFFKFSDPTKLSKFKKNQR 229
TTK + R + I+ WL E P ++ T+L+K ++ Q+
Sbjct: 681 TTKAFARNIIPIEGSWLAEICPKYYG----TRLTKQQQQQQ 717
Score = 221 (82.9 bits), Expect = 8.0e-33, Sum P(2) = 8.0e-33
Identities = 56/138 (40%), Positives = 80/138 (57%)
Query: 219 TKLSKFKKNQRLEPLQRTNRISFPPGLLKQAVKKRPE---IKLIVTSATLDAVKFSSYFF 275
+ LSK+ E +RT GLLK K+R + +K+I+ SATLDA FS YF
Sbjct: 182 SSLSKYSVIILDEAHERTLNTDVLFGLLKSIQKRREKKNPLKIIIMSATLDAELFSQYFN 241
Query: 276 EAPIFTIPGRTFPVEVLYTKEPETDYLDASLITVMQIHL------------REPPGDVLL 323
AP+ I GR FPV++ YT+E + DY+DA+LITV+QIH+ E GD+L+
Sbjct: 242 NAPVLYIEGRQFPVQIYYTEEIQKDYVDAALITVLQIHIAHLTDKSINKEEEEDGGDILV 301
Query: 324 FLTGKLDVRKQLLGIMDR 341
FLTG+ ++ ++DR
Sbjct: 302 FLTGRDEIENLEKLLLDR 319
Score = 219 (82.2 bits), Expect = 8.0e-33, Sum P(2) = 8.0e-33
Identities = 44/122 (36%), Positives = 76/122 (62%)
Query: 329 LDVRKQLLGIMDRHKLDVVSAGKNTVRVQKAVCSGFFRNAAKKDPQEGYRTLVDSQVVYI 388
L+V +QL+ KL +VS G + R++K+ GFF N A P + Y+T+VD++ + I
Sbjct: 600 LNVFEQLVKYCISLKLPIVSCGSDFDRIKKSFIGGFFLNTAILQPDKKYKTMVDNKEIQI 659
Query: 389 HPSSALFNRQPEWVIYHELVQTTKEYMREVTSIDPKWLVEFAPAFFKFSDPTKLSKFKKN 448
HP+S LF+++P+ ++Y+EL TTK + R + I+ WL E P ++ T+L+K ++
Sbjct: 660 HPTSFLFDQKPQHILYNELTITTKAFARNIIPIEGSWLAEICPKYYG----TRLTKQQQQ 715
Query: 449 QR 450
Q+
Sbjct: 716 QQ 717
Score = 209 (78.6 bits), Expect = 1.8e-13, P = 1.8e-13
Identities = 46/91 (50%), Positives = 62/91 (68%)
Query: 456 NKYEEPNAWRI-----SREEIDTACEILYERMKSLGPDVPELIILPVYSALPSEMQTRIF 510
NK EE + I R+EI+ ++L +R+ L +LI+ P++SALP E Q ++F
Sbjct: 289 NKEEEEDGGDILVFLTGRDEIENLEKLLLDRIPRLPVGSKDLIVCPIFSALPQEQQMKVF 348
Query: 511 EAAPPGSRKVVIATNIAETSLTIDGIFYVVD 541
E AP GSRKV++ATNIAETSLTI+GI YVVD
Sbjct: 349 EKAPKGSRKVILATNIAETSLTINGIRYVVD 379
>TAIR|locus:2147785 [details] [associations]
symbol:AT5G14900 species:3702 "Arabidopsis thaliana"
[GO:0004386 "helicase activity" evidence=IEA] [GO:0005634 "nucleus"
evidence=ISM] InterPro:IPR007502 Pfam:PF04408 SMART:SM00847
EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0004386
eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717 HOGENOM:HOG000175261
KO:K12820 EMBL:AL391146 OMA:IRTVTHI IPI:IPI00537280 PIR:T51435
RefSeq:NP_196994.1 UniGene:At.65514 ProteinModelPortal:Q9LFR5
SMR:Q9LFR5 EnsemblPlants:AT5G14900.1 GeneID:831342
KEGG:ath:AT5G14900 TAIR:At5g14900 InParanoid:Q9LFR5
PhylomeDB:Q9LFR5 ProtClustDB:CLSN2916823 Genevestigator:Q9LFR5
Uniprot:Q9LFR5
Length = 301
Score = 393 (143.4 bits), Expect = 1.7e-36, P = 1.7e-36
Identities = 85/221 (38%), Positives = 137/221 (61%)
Query: 12 MAEFPLEPNLSKMLIMSVHLQCSDEVLTIVSMLSVQNVFYRPXXXXXXXXXXX-XXFNQM 70
M+EFPL+P ++KMLI+S CS+E+L+I +MLSV N F RP F +
Sbjct: 59 MSEFPLDPQMAKMLIVSPQFNCSNEILSISAMLSVPNCFIRPRGEAQKAADEAKSSFAHI 118
Query: 71 EGDHITLLAVYNSW-RNNKFSNAWCYENFVQIRTLKRAQDVRKQLLGIMDRHKLDVVSAG 129
+GDH+TLL +++++ +NN+ N WC F+ R +K A VR+QL+ IM R ++ + S
Sbjct: 119 DGDHLTLLNLFHAFLQNNQDPN-WCCTKFINYRAMKSAVSVREQLVRIMLRFQIKLCSPD 177
Query: 130 KNT----VRVQKAVCSGFFRNAAKKDPQEGYRTL--VDSQVVYIHPSSALFNRQPEWVIY 183
N+ V ++KA+ +G+F A + Y T D QVV++HPS+ L + +PEWV+Y
Sbjct: 178 FNSRDYYVNIRKALLAGYFMQVAHLERTGHYLTFRDKDDQVVHLHPSNCL-DHKPEWVVY 236
Query: 184 HELVQTTKEYMREVTSIDPKWLVEFAPAFFKFSD-PTKLSK 223
+E V T++ ++R VT I +WLV+ AP ++K ++ P+ +K
Sbjct: 237 NEYVFTSRNFIRTVTHIRGEWLVDVAPHYYKLANFPSSEAK 277
Score = 198 (74.8 bits), Expect = 2.0e-13, P = 2.0e-13
Identities = 45/123 (36%), Positives = 77/123 (62%)
Query: 329 LDVRKQLLGIMDRHKLDVVSAGKNT----VRVQKAVCSGFFRNAAKKDPQEGYRTL--VD 382
+ VR+QL+ IM R ++ + S N+ V ++KA+ +G+F A + Y T D
Sbjct: 156 VSVREQLVRIMLRFQIKLCSPDFNSRDYYVNIRKALLAGYFMQVAHLERTGHYLTFRDKD 215
Query: 383 SQVVYIHPSSALFNRQPEWVIYHELVQTTKEYMREVTSIDPKWLVEFAPAFFKFSD-PTK 441
QVV++HPS+ L + +PEWV+Y+E V T++ ++R VT I +WLV+ AP ++K ++ P+
Sbjct: 216 DQVVHLHPSNCL-DHKPEWVVYNEYVFTSRNFIRTVTHIRGEWLVDVAPHYYKLANFPSS 274
Query: 442 LSK 444
+K
Sbjct: 275 EAK 277
>RGD|1307239 [details] [associations]
symbol:Dhx33 "DEAH (Asp-Glu-Ala-His) box polypeptide 33"
species:10116 "Rattus norvegicus" [GO:0000182 "rDNA binding"
evidence=ISO] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0005654 "nucleoplasm" evidence=ISO] [GO:0005730 "nucleolus"
evidence=ISO] [GO:0033613 "activating transcription factor binding"
evidence=ISO] [GO:0045943 "positive regulation of transcription
from RNA polymerase I promoter" evidence=ISO] InterPro:IPR007502
Pfam:PF04408 SMART:SM00847 RGD:1307239 GO:GO:0004386
InterPro:IPR011709 Pfam:PF07717 IPI:IPI00952339
Ensembl:ENSRNOT00000068255 UCSC:RGD:1307239 Uniprot:D3ZWE8
Length = 475
Score = 391 (142.7 bits), Expect = 2.7e-36, P = 2.7e-36
Identities = 81/214 (37%), Positives = 121/214 (56%)
Query: 2 DSLVVTPISQ-MAEFPLEPNLSKMLIMSVHLQCSDEVLTIVSMLSVQNVFYRPXXXXXXX 60
D L +TPI + MA FPLEP +K +++S C++E+LTIVS+LSV +V Y P
Sbjct: 254 DQLALTPIGRKMAAFPLEPKFAKTILLSSKFHCTEEILTIVSLLSVDSVLYNPPARRDEV 313
Query: 61 XXXXXXFNQMEGDHITLLAVYNSWRNNKFSNAWCYENFVQIRTLKRAQDVRKQLLGIMDR 120
F EGDHITLL +Y +++N + WC ENFV + + +VR QL I +
Sbjct: 314 QSVRKKFISSEGDHITLLNIYRTFKNIGGNKDWCKENFVNSKNMLLVAEVRAQLRDICLK 373
Query: 121 HKLDVVSAGKNTVRVQKAVCSGFFRNAAKKDPQEGYRTLVDSQVVYIHPSSALFNRQPEW 180
+ ++S+ + V++ + F + A+ P Y T Q V IHPSS LF+ +P
Sbjct: 374 MSMPIMSSRGDMESVRRCLAHSLFMSTAELQPDGTYATTDTHQPVAIHPSSVLFHCKPAC 433
Query: 181 VIYHELVQTTKEYMREVTSIDPKWLVEFAPAFFK 214
V+Y L+ T K YMR++ +D +WL E AP +F+
Sbjct: 434 VVYTSLLYTNKCYMRDLCVVDAEWLYEAAPDYFR 467
Score = 172 (65.6 bits), Expect = 9.8e-10, P = 9.8e-10
Identities = 37/106 (34%), Positives = 59/106 (55%)
Query: 330 DVRKQLLGIMDRHKLDVVSAGKNTVRVQKAVCSGFFRNAAKKDPQEGYRTLVDSQVVYIH 389
+VR QL I + + ++S+ + V++ + F + A+ P Y T Q V IH
Sbjct: 362 EVRAQLRDICLKMSMPIMSSRGDMESVRRCLAHSLFMSTAELQPDGTYATTDTHQPVAIH 421
Query: 390 PSSALFNRQPEWVIYHELVQTTKEYMREVTSIDPKWLVEFAPAFFK 435
PSS LF+ +P V+Y L+ T K YMR++ +D +WL E AP +F+
Sbjct: 422 PSSVLFHCKPACVVYTSLLYTNKCYMRDLCVVDAEWLYEAAPDYFR 467
>UNIPROTKB|F1MWZ4 [details] [associations]
symbol:F1MWZ4 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0045943 "positive regulation of transcription from RNA
polymerase I promoter" evidence=IEA] [GO:0033613 "activating
transcription factor binding" evidence=IEA] [GO:0005730 "nucleolus"
evidence=IEA] [GO:0005654 "nucleoplasm" evidence=IEA] [GO:0000182
"rDNA binding" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 GO:GO:0005524 GO:GO:0005654 GO:GO:0005730
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 GO:GO:0000182 GO:GO:0045943
GeneTree:ENSGT00700000104241 OMA:APDYFRR EMBL:DAAA02048722
IPI:IPI00693412 Ensembl:ENSBTAT00000016932 Uniprot:F1MWZ4
Length = 714
Score = 400 (145.9 bits), Expect = 3.1e-36, P = 3.1e-36
Identities = 80/212 (37%), Positives = 123/212 (58%)
Query: 4 LVVTPISQ-MAEFPLEPNLSKMLIMSVHLQCSDEVLTIVSMLSVQNVFYRPXXXXXXXXX 62
L +TP+ + MA FPLEP +K +++S C++E+LTIV++LSV ++ Y P
Sbjct: 495 LTLTPMGRKMAAFPLEPKFAKTILLSPKFHCTEEILTIVALLSVDSILYNPPSRRDEVQS 554
Query: 63 XXXXFNQMEGDHITLLAVYNSWRNNKFSNAWCYENFVQIRTLKRAQDVRKQLLGIMDRHK 122
F EGDH+TLL VY +++N + WC ENFV + + +VR QL I +
Sbjct: 555 VRKKFVSSEGDHLTLLNVYRTFKNTGGNKEWCKENFVNSKNMMLVAEVRAQLRDICIKMS 614
Query: 123 LDVVSAGKNTVRVQKAVCSGFFRNAAKKDPQEGYRTLVDSQVVYIHPSSALFNRQPEWVI 182
+ +VS+ +T +++ + F + A+ P Y T Q V IHPSS LF+ +P V+
Sbjct: 615 MPIVSSRGDTESIRRCLAHSLFTSTAELQPDGSYATTDTHQPVAIHPSSVLFHCKPACVV 674
Query: 183 YHELVQTTKEYMREVTSIDPKWLVEFAPAFFK 214
Y EL+ T+K YMR++ +D +WL E AP FF+
Sbjct: 675 YTELLFTSKCYMRDLCVVDAEWLYEAAPDFFR 706
Score = 206 (77.6 bits), Expect = 3.9e-28, Sum P(2) = 3.9e-28
Identities = 44/107 (41%), Positives = 67/107 (62%)
Query: 231 EPLQRTNRISFPPGLLKQAVKKRPEI-----KLIVTSATLDAVKFSSYFFEAPIFTIPGR 285
E +RT G++K A K+R E+ K++V SAT+D FS YF AP+ + GR
Sbjct: 202 EAHERTLHTDVLFGVVKAAQKRRKELGKLPLKVLVMSATMDVDLFSQYFNGAPVLYLEGR 261
Query: 286 TFPVEVLYTKEPETDYLDASLITVMQIHLREPPG-DVLLFLTGKLDV 331
P+++ YTK+P+ DYL A+L++V QIH P D+L+FLTG+ ++
Sbjct: 262 QHPIQIFYTKQPQHDYLHAALVSVFQIHQEAPSSHDILVFLTGQEEI 308
Score = 190 (71.9 bits), Expect = 3.9e-28, Sum P(2) = 3.9e-28
Identities = 40/106 (37%), Positives = 62/106 (58%)
Query: 330 DVRKQLLGIMDRHKLDVVSAGKNTVRVQKAVCSGFFRNAAKKDPQEGYRTLVDSQVVYIH 389
+VR QL I + + +VS+ +T +++ + F + A+ P Y T Q V IH
Sbjct: 601 EVRAQLRDICIKMSMPIVSSRGDTESIRRCLAHSLFTSTAELQPDGSYATTDTHQPVAIH 660
Query: 390 PSSALFNRQPEWVIYHELVQTTKEYMREVTSIDPKWLVEFAPAFFK 435
PSS LF+ +P V+Y EL+ T+K YMR++ +D +WL E AP FF+
Sbjct: 661 PSSVLFHCKPACVVYTELLFTSKCYMRDLCVVDAEWLYEAAPDFFR 706
Score = 183 (69.5 bits), Expect = 2.1e-27, Sum P(2) = 2.1e-27
Identities = 38/86 (44%), Positives = 57/86 (66%)
Query: 468 REEIDTACEILYERMKSLGPDVPELIILPVYSALPSEMQTRIFEAAPPGSRKVVIATNIA 527
+EEI+ + + K L P +++LP+Y++LP Q R+F+ AP G RKV+I+TNIA
Sbjct: 305 QEEIEAMSKTCRDIAKHLPDGCPSMLVLPLYASLPYAQQLRVFQRAPKGYRKVIISTNIA 364
Query: 528 ETSLTIDGIFYVVDPFDIEVRQAKYH 553
ETS+TI GI YVVD ++ + KY+
Sbjct: 365 ETSITITGIKYVVDTGMVKAK--KYN 388
>UNIPROTKB|Q05BE5 [details] [associations]
symbol:DHX33 "DEAH (Asp-Glu-Ala-His) box polypeptide 33,
isoform CRA_c" species:9606 "Homo sapiens" [GO:0004386 "helicase
activity" evidence=IEA] InterPro:IPR007502 Pfam:PF04408
SMART:SM00847 EMBL:CH471108 GO:GO:0004386 InterPro:IPR011709
Pfam:PF07717 HOGENOM:HOG000175261 EMBL:AC004148 UniGene:Hs.250456
HGNC:HGNC:16718 ChiTaRS:DHX33 EMBL:BC050409 IPI:IPI00789223
SMR:Q05BE5 Ensembl:ENST00000433302 UCSC:uc010clf.3
HOVERGEN:HBG082280 Uniprot:Q05BE5
Length = 483
Score = 390 (142.3 bits), Expect = 3.5e-36, P = 3.5e-36
Identities = 81/214 (37%), Positives = 121/214 (56%)
Query: 2 DSLVVTPISQ-MAEFPLEPNLSKMLIMSVHLQCSDEVLTIVSMLSVQNVFYRPXXXXXXX 60
D L +TP+ + MA FPLEP +K ++MS C++E+LTIVS+LSV +V + P
Sbjct: 262 DQLTLTPMGRKMAAFPLEPKFAKTILMSPKFHCTEEILTIVSLLSVDSVLHNPPSRREEV 321
Query: 61 XXXXXXFNQMEGDHITLLAVYNSWRNNKFSNAWCYENFVQIRTLKRAQDVRKQLLGIMDR 120
F EGDH+TLL +Y +++N + WC ENFV + + +VR QL I +
Sbjct: 322 QGVRKKFISSEGDHMTLLNIYRTFKNLGGNKDWCKENFVNSKNMTLVAEVRAQLRDICLK 381
Query: 121 HKLDVVSAGKNTVRVQKAVCSGFFRNAAKKDPQEGYRTLVDSQVVYIHPSSALFNRQPEW 180
+ + S+ + V++ + F + A+ P Y T Q V IHPSS LF+ +P
Sbjct: 382 MSMPIASSRGDVESVRRCLAHSLFMSTAELQPDGTYATTDTHQPVAIHPSSVLFHCKPAC 441
Query: 181 VIYHELVQTTKEYMREVTSIDPKWLVEFAPAFFK 214
V+Y EL+ T K YMR++ ID +WL E AP +F+
Sbjct: 442 VVYTELLYTNKCYMRDLCVIDAQWLYEAAPEYFR 475
Score = 179 (68.1 bits), Expect = 1.7e-10, P = 1.7e-10
Identities = 39/106 (36%), Positives = 59/106 (55%)
Query: 330 DVRKQLLGIMDRHKLDVVSAGKNTVRVQKAVCSGFFRNAAKKDPQEGYRTLVDSQVVYIH 389
+VR QL I + + + S+ + V++ + F + A+ P Y T Q V IH
Sbjct: 370 EVRAQLRDICLKMSMPIASSRGDVESVRRCLAHSLFMSTAELQPDGTYATTDTHQPVAIH 429
Query: 390 PSSALFNRQPEWVIYHELVQTTKEYMREVTSIDPKWLVEFAPAFFK 435
PSS LF+ +P V+Y EL+ T K YMR++ ID +WL E AP +F+
Sbjct: 430 PSSVLFHCKPACVVYTELLYTNKCYMRDLCVIDAQWLYEAAPEYFR 475
>CGD|CAL0005059 [details] [associations]
symbol:orf19.2818 species:5476 "Candida albicans" [GO:0071007
"U2-type catalytic step 2 spliceosome" evidence=IEA] [GO:0000386
"second spliceosomal transesterification activity" evidence=IEA]
[GO:0008186 "RNA-dependent ATPase activity" evidence=IEA]
[GO:0000350 "generation of catalytic spliceosome for second
transesterification step" evidence=IEA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 CGD:CAL0005059
GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 EMBL:AACQ01000080 EMBL:AACQ01000079 eggNOG:COG1643
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026 KO:K12815
RefSeq:XP_715749.1 RefSeq:XP_715799.1 STRING:Q5A227 GeneID:3642531
GeneID:3642595 KEGG:cal:CaO19.10336 KEGG:cal:CaO19.2818
Uniprot:Q5A227
Length = 1070
Score = 401 (146.2 bits), Expect = 3.7e-36, P = 3.7e-36
Identities = 89/224 (39%), Positives = 137/224 (61%)
Query: 12 MAEFPLEPNLSKMLIMSVH--LQCSDEVLTIVSMLSVQNVFYRPXXXXXXXXXXXXXFNQ 69
M +FP+EP L+K++++S CS+EV+TIV+MLSV N+F RP F
Sbjct: 789 MTQFPIEPTLAKLILLSTQPEFHCSEEVVTIVAMLSVPNIFNRPKERANEADMAREKFII 848
Query: 70 MEGDHITLLAVYNSWR-N-NKFS------NAWCYENFVQIRTLKRAQDVRKQLLGIMDRH 121
E DH+TLL V+N W N NKF N WC +NF+Q+++L RA+D++ QL+ IM ++
Sbjct: 849 SESDHLTLLNVFNQWNINLNKFKGNYTKINNWCNKNFLQLKSLYRAKDIKHQLMLIMKKN 908
Query: 122 KLDVVSAGKNTVRVQKAVCSGFFRNAAKK-----DPQEGYRTLVDSQV-VYIHPSSALF- 174
KL ++ + K ++K +C+ F++ +AK + Q + L S + +++HP+S+L
Sbjct: 909 KLAILKS-KTDDDIRKCLCASFYQQSAKLTKMNLNGQPEFVNLRHSYMKMFLHPTSSLLD 967
Query: 175 -NRQPEWVIYHELVQTTKEYMREVTSIDPKWLVEFAPAFFKFSD 217
N +VIYHELV T KEYM VT++DP WL+E+ FF +D
Sbjct: 968 SNLSTNYVIYHELVLTKKEYMNCVTTVDPIWLLEYGYKFFGVAD 1011
Score = 201 (75.8 bits), Expect = 9.3e-27, Sum P(2) = 9.3e-27
Identities = 42/96 (43%), Positives = 63/96 (65%)
Query: 244 GLLKQAVKKRPEIKLIVTSATLDAVKFSSYFFEAPIFTIPGRTFPVEVLYTKEPETDYLD 303
GL K + KR ++KLIVTSAT++A +F+ +F AP F IPGRTFPVEV + ++ DY++
Sbjct: 500 GLFKNLLAKRKDLKLIVTSATMNANRFTKFFGVAPQFHIPGRTFPVEVFFNRDVNMDYVE 559
Query: 304 ASLITVMQIHL--------REPPGDVLLFLTGKLDV 331
++ V+ IHL GD+L+F+TG+ D+
Sbjct: 560 MAVKQVLTIHLGRWNADNNNANDGDILVFMTGQEDI 595
Score = 187 (70.9 bits), Expect = 9.3e-27, Sum P(2) = 9.3e-27
Identities = 43/117 (36%), Positives = 72/117 (61%)
Query: 330 DVRKQLLGIMDRHKLDVVSAGKNTVRVQKAVCSGFFRNAAKK-----DPQEGYRTLVDSQ 384
D++ QL+ IM ++KL ++ + K ++K +C+ F++ +AK + Q + L S
Sbjct: 896 DIKHQLMLIMKKNKLAILKS-KTDDDIRKCLCASFYQQSAKLTKMNLNGQPEFVNLRHSY 954
Query: 385 V-VYIHPSSALF--NRQPEWVIYHELVQTTKEYMREVTSIDPKWLVEFAPAFFKFSD 438
+ +++HP+S+L N +VIYHELV T KEYM VT++DP WL+E+ FF +D
Sbjct: 955 MKMFLHPTSSLLDSNLSTNYVIYHELVLTKKEYMNCVTTVDPIWLLEYGYKFFGVAD 1011
Score = 186 (70.5 bits), Expect = 1.2e-26, Sum P(2) = 1.2e-26
Identities = 36/74 (48%), Positives = 52/74 (70%)
Query: 468 REEIDTACEILYERMKSLGPDVPELIILPVYSALPSEMQTRIFEAAPPGSRKVVIATNIA 527
+E+I+ C+++ E++ L D P L I P+YS +P ++Q +IF RKVV+ATNIA
Sbjct: 592 QEDIEITCDLIKEKLNLL-EDPPPLDIFPIYSTMPQDLQKKIFNKTNLQRRKVVVATNIA 650
Query: 528 ETSLTIDGIFYVVD 541
ETSLT+DGI YV+D
Sbjct: 651 ETSLTVDGIKYVID 664
Score = 41 (19.5 bits), Expect = 6.4e-10, Sum P(2) = 6.4e-10
Identities = 12/29 (41%), Positives = 16/29 (55%)
Query: 435 KFSDPTKLSKFKKNQRLEPLYNKYEEPNA 463
K PTK FKK +R + L K E P++
Sbjct: 92 KIKPPTK---FKKMKREDALRIKKETPSS 117
Score = 39 (18.8 bits), Expect = 8.0e-10, Sum P(2) = 8.0e-10
Identities = 11/42 (26%), Positives = 18/42 (42%)
Query: 214 KFSDPTKLSKFKKNQRLEPLQRTNRISFPPGLLKQAVKKRPE 255
K PTK K K+ L +++ S P +V +P+
Sbjct: 92 KIKPPTKFKKMKREDALR-IKKETPSSLSPS---SSVPSKPQ 129
>UNIPROTKB|B0V0F8 [details] [associations]
symbol:DHX16 "Putative pre-mRNA-splicing factor
ATP-dependent RNA helicase DHX16" species:9606 "Homo sapiens"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] InterPro:IPR002464 InterPro:IPR011545
Pfam:PF00270 PROSITE:PS00690 GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
HOVERGEN:HBG039428 HGNC:HGNC:2739 OrthoDB:EOG4VHK5Q EMBL:CR759873
IPI:IPI00894081 SMR:B0V0F8 Ensembl:ENST00000450902 Uniprot:B0V0F8
Length = 669
Score = 297 (109.6 bits), Expect = 8.4e-36, Sum P(2) = 8.4e-36
Identities = 78/249 (31%), Positives = 130/249 (52%)
Query: 101 IRTLKRAQDV---RKQLLGIMDRHKLDVVS----AGKNTVRVQKAVCSGFFRNAAKKDPQ 153
I+ ++R+ V R++LL + H++ ++ +GK T Q G+ K
Sbjct: 392 IQAVRRSLPVFPFREELLAAIANHQVLIIEGETGSGKTTQIPQYLFEEGYTNKGMKIACT 451
Query: 154 EGYRTLVDSQVVYIHPSSAL-FNRQPEWVIYHELVQTTKEYMREVTSIDPKWLVEFAPAF 212
+ R S + + + + I E + + +R +T D L EF
Sbjct: 452 QPRRVAAMSVAARVAREMGVKLGNEVGYSIRFEDCTSERTVLRYMT--DGMLLREF---- 505
Query: 213 FKFSDPTKLSKFKKNQRLEPLQRTNRISFPPGLLKQAVKKRPEIKLIVTSATLDAVKFSS 272
S+P L+ + E +RT GL+K + RPE+K++V SAT+D +FS+
Sbjct: 506 --LSEPD-LASYSVVMVDEAHERTLHTDILFGLIKDVARFRPELKVLVASATMDTARFST 562
Query: 273 YFFEAPIFTIPGRTFPVEVLYTKEPETDYLDASLITVMQIHLREPPGDVLLFLTGKLDVR 332
+F +AP+F IPGR FPV++ YTK PE DYL+A +++V+QIH+ +PPGD+L+FLTG+ ++
Sbjct: 563 FFDDAPVFRIPGRRFPVDIFYTKAPEADYLEACVVSVLQIHVTQPPGDILVFLTGQEEIE 622
Query: 333 KQLLGIMDR 341
+ DR
Sbjct: 623 AACEMLQDR 631
Score = 163 (62.4 bits), Expect = 8.4e-36, Sum P(2) = 8.4e-36
Identities = 28/52 (53%), Positives = 41/52 (78%)
Query: 468 REEIDTACEILYERMKSLGPDVPELIILPVYSALPSEMQTRIFEAAPPGSRK 519
+EEI+ ACE+L +R + LG + EL++LP+Y+ LPS+MQ RIF+ PPG+RK
Sbjct: 618 QEEIEAACEMLQDRCRRLGSKIRELLVLPIYANLPSDMQARIFQPTPPGARK 669
>UNIPROTKB|F1PRA1 [details] [associations]
symbol:DHX33 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0045943 "positive regulation of transcription
from RNA polymerase I promoter" evidence=IEA] [GO:0033613
"activating transcription factor binding" evidence=IEA] [GO:0005730
"nucleolus" evidence=IEA] [GO:0005654 "nucleoplasm" evidence=IEA]
[GO:0000182 "rDNA binding" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 GO:GO:0005524 GO:GO:0005654 GO:GO:0005730
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 GO:GO:0000182 GO:GO:0045943
GeneTree:ENSGT00700000104241 OMA:APDYFRR EMBL:AAEX03003580
Ensembl:ENSCAFT00000024626 Uniprot:F1PRA1
Length = 616
Score = 396 (144.5 bits), Expect = 1.5e-35, P = 1.5e-35
Identities = 83/214 (38%), Positives = 123/214 (57%)
Query: 2 DSLVVTPISQ-MAEFPLEPNLSKMLIMSVHLQCSDEVLTIVSMLSVQNVFYRPXXXXXXX 60
+ L +TPI + MA FPLEP +K +++S C++E+LTIVS+LSV +V Y P
Sbjct: 395 NQLTLTPIGRKMAAFPLEPKFAKTILLSPKFHCTEEILTIVSLLSVDSVLYNPPSRRDEV 454
Query: 61 XXXXXXFNQMEGDHITLLAVYNSWRNNKFSNAWCYENFVQIRTLKRAQDVRKQLLGIMDR 120
F EGDHITLL +Y ++++ WC ENFV R + A +VR QL I +
Sbjct: 455 QAMRKKFLSSEGDHITLLNIYRTFKSLGGDKDWCRENFVNSRNMMLAAEVRAQLRDICLK 514
Query: 121 HKLDVVSAGKNTVRVQKAVCSGFFRNAAKKDPQEGYRTLVDSQVVYIHPSSALFNRQPEW 180
+ +VS + +++ + F +AA+ P Y T Q V IHPSSALF+ +P
Sbjct: 515 MSMPMVSCRGDVESIRRCLAHSLFMSAAELQPDGTYTTTDSRQPVAIHPSSALFHCRPAC 574
Query: 181 VIYHELVQTTKEYMREVTSIDPKWLVEFAPAFFK 214
V+Y EL+ T+K YMR++ + +WL E AP +F+
Sbjct: 575 VVYTELLHTSKCYMRDLCVVAAEWLYEAAPDYFR 608
Score = 199 (75.1 bits), Expect = 1.8e-27, Sum P(2) = 1.8e-27
Identities = 44/107 (41%), Positives = 66/107 (61%)
Query: 231 EPLQRTNRISFPPGLLKQAVKKRPEI-----KLIVTSATLDAVKFSSYFFEAPIFTIPGR 285
E +RT G++K A ++R E+ K+IV SAT+D FS YF A + + GR
Sbjct: 104 EAHERTVHTDVLFGVVKAAQRRRKELRKLPLKVIVMSATMDVDLFSQYFNGASVLYLEGR 163
Query: 286 TFPVEVLYTKEPETDYLDASLITVMQIHLREPPG-DVLLFLTGKLDV 331
P++V YTK+P+ DYL A+L++V QIH P D+L+FLTG+ ++
Sbjct: 164 QHPIQVFYTKQPQQDYLHAALVSVFQIHQEAPSSQDILVFLTGQEEI 210
Score = 189 (71.6 bits), Expect = 1.8e-27, Sum P(2) = 1.8e-27
Identities = 39/86 (45%), Positives = 57/86 (66%)
Query: 468 REEIDTACEILYERMKSLGPDVPELIILPVYSALPSEMQTRIFEAAPPGSRKVVIATNIA 527
+EEI+ + + K L P +++LP+Y++LP Q R+F+ AP G RKV+IATNIA
Sbjct: 207 QEEIEAVSKTCRDIAKHLPDGCPSMLVLPLYASLPYAQQLRVFQGAPKGCRKVIIATNIA 266
Query: 528 ETSLTIDGIFYVVDPFDIEVRQAKYH 553
ETS+TI GI YVVD ++ + KY+
Sbjct: 267 ETSITITGIKYVVDTGMVKAK--KYN 290
Score = 180 (68.4 bits), Expect = 1.6e-26, Sum P(2) = 1.6e-26
Identities = 39/106 (36%), Positives = 61/106 (57%)
Query: 330 DVRKQLLGIMDRHKLDVVSAGKNTVRVQKAVCSGFFRNAAKKDPQEGYRTLVDSQVVYIH 389
+VR QL I + + +VS + +++ + F +AA+ P Y T Q V IH
Sbjct: 503 EVRAQLRDICLKMSMPMVSCRGDVESIRRCLAHSLFMSAAELQPDGTYTTTDSRQPVAIH 562
Query: 390 PSSALFNRQPEWVIYHELVQTTKEYMREVTSIDPKWLVEFAPAFFK 435
PSSALF+ +P V+Y EL+ T+K YMR++ + +WL E AP +F+
Sbjct: 563 PSSALFHCRPACVVYTELLHTSKCYMRDLCVVAAEWLYEAAPDYFR 608
>SGD|S000005294 [details] [associations]
symbol:PRP2 "RNA-dependent ATPase in the DEAH-box family"
species:4932 "Saccharomyces cerevisiae" [GO:0016787 "hydrolase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0008380 "RNA splicing" evidence=IEA]
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0008186 "RNA-dependent ATPase
activity" evidence=IDA] [GO:0071006 "U2-type catalytic step 1
spliceosome" evidence=IMP;IDA] [GO:0006397 "mRNA processing"
evidence=IEA] [GO:0000349 "generation of catalytic spliceosome for
first transesterification step" evidence=IDA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 SGD:S000005294
GO:GO:0005524 GO:GO:0005634 EMBL:BK006947 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 EMBL:X77395
GO:GO:0000349 eggNOG:COG1643 GeneTree:ENSGT00700000104393
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026 HOGENOM:HOG000175261
OrthoDB:EOG4SBJ63 GO:GO:0008186 EMBL:X55936 EMBL:X55999 EMBL:Z71626
PIR:S12334 RefSeq:NP_014408.1 ProteinModelPortal:P20095 SMR:P20095
DIP:DIP-3961N IntAct:P20095 MINT:MINT-496813 STRING:P20095
PaxDb:P20095 EnsemblFungi:YNR011C GeneID:855745 KEGG:sce:YNR011C
CYGD:YNR011c KO:K12814 OMA:DDKIHIN NextBio:980148
Genevestigator:P20095 GermOnline:YNR011C Uniprot:P20095
Length = 876
Score = 260 (96.6 bits), Expect = 7.4e-35, Sum P(2) = 7.4e-35
Identities = 50/121 (41%), Positives = 80/121 (66%)
Query: 214 KFSDPTKLSKFKKNQRLEPLQRTNRISFPPGLLKQAVKKRPEIKLIVTSATLDAVKFSSY 273
+F +KLSK+ E +RT GLLK + +RP +KL+++SAT++A KFS +
Sbjct: 330 EFLTDSKLSKYSCIMIDEAHERTLATDILIGLLKDILPQRPTLKLLISSATMNAKKFSEF 389
Query: 274 FFEAPIFTIPGRTFPVEVLYTKEPETDYLDASLITVMQIHLREP-PGDVLLFLTGKLDVR 332
F PIF +PGR +PV++ YT +PE +Y+ A++ T+ QIH + PGD+L+FLTG+ ++
Sbjct: 390 FDNCPIFNVPGRRYPVDIHYTLQPEANYIHAAITTIFQIHTTQSLPGDILVFLTGQEEIE 449
Query: 333 K 333
+
Sbjct: 450 R 450
Score = 228 (85.3 bits), Expect = 2.0e-15, P = 2.0e-15
Identities = 60/186 (32%), Positives = 98/186 (52%)
Query: 12 MAEFPLEPNLSKMLIMSV-HLQCS---DEVLTIVSML-SVQNVFYRPXXXXXXXXXXXXX 66
M EFP EP +K+L + H QC +E LTIVSML ++F
Sbjct: 642 MCEFPCEPEFAKVLYTAATHEQCQGVLEECLTIVSMLHETPSLFI-----GQKRDAAASV 696
Query: 67 FNQMEGDHITLLAVYNSWRNNKFSNAWCYENFVQIRTLKRAQDVRKQL------LGIMDR 120
+++E DHI L ++N WRN+KFS +WC ++ +Q +T+ R +++R QL +G++++
Sbjct: 697 LSEVESDHILYLEIFNQWRNSKFSRSWCQDHKIQFKTMLRVRNIRNQLFRCSEKVGLVEK 756
Query: 121 H---KLDVVS-AGKNTVRVQKAVCSGFFRNAAKKDPQEGYRTLVDSQV---VYIHPSSAL 173
+ ++ + + AG R+ + SGF N + P GY+T+ S V +HP+S L
Sbjct: 757 NDQARMKIGNIAGYINARITRCFISGFPMNIVQLGPT-GYQTMGRSSGGLNVSVHPTSIL 815
Query: 174 FNRQPE 179
F E
Sbjct: 816 FVNHKE 821
Score = 199 (75.1 bits), Expect = 7.4e-35, Sum P(2) = 7.4e-35
Identities = 41/75 (54%), Positives = 51/75 (68%)
Query: 468 REEIDTACEILYERMKSLGPDVPELIILPVYSALPSEMQTRIFEAAPPGSRKVVIATNIA 527
+EEI+ L E M LG ++II P+Y+ LP E Q +IF+ P RKVV+ATNIA
Sbjct: 445 QEEIERTKTKLEEIMSKLGSRTKQMIITPIYANLPQEQQLKIFQPTPENCRKVVLATNIA 504
Query: 528 ETSLTIDGIFYVVDP 542
ETSLTIDGI YV+DP
Sbjct: 505 ETSLTIDGIRYVIDP 519
Score = 123 (48.4 bits), Expect = 0.00055, P = 0.00055
Identities = 36/136 (26%), Positives = 72/136 (52%)
Query: 95 YENFVQIRTLKRAQDVRKQLLGIMDRH---KLDVVS-AGKNTVRVQKAVCSGFFRNAAKK 150
++ +++R ++ + +G+++++ ++ + + AG R+ + SGF N +
Sbjct: 731 FKTMLRVRNIRNQLFRCSEKVGLVEKNDQARMKIGNIAGYINARITRCFISGFPMNIVQL 790
Query: 151 DPQEGYRTLVDSQV---VYIHPSSALF-------NRQPEWVIYHELVQTTKEYMREVTSI 200
P GY+T+ S V +HP+S LF R ++V+Y +L+ T+KE++R+ I
Sbjct: 791 GPT-GYQTMGRSSGGLNVSVHPTSILFVNHKEKAQRPSKYVLYQQLMLTSKEFIRDCLVI 849
Query: 201 DPK--WLVEFAPAFFK 214
PK WL++ P FK
Sbjct: 850 -PKEEWLIDMVPQIFK 864
Score = 120 (47.3 bits), Expect = 1.4e-26, Sum P(2) = 1.4e-26
Identities = 34/99 (34%), Positives = 52/99 (52%)
Query: 349 AGKNTVRVQKAVCSGFFRNAAKKDPQEGYRTLVDSQV---VYIHPSSALF-------NRQ 398
AG R+ + SGF N + P GY+T+ S V +HP+S LF R
Sbjct: 768 AGYINARITRCFISGFPMNIVQLGPT-GYQTMGRSSGGLNVSVHPTSILFVNHKEKAQRP 826
Query: 399 PEWVIYHELVQTTKEYMREVTSIDPK--WLVEFAPAFFK 435
++V+Y +L+ T+KE++R+ I PK WL++ P FK
Sbjct: 827 SKYVLYQQLMLTSKEFIRDCLVI-PKEEWLIDMVPQIFK 864
>UNIPROTKB|I3L1L6 [details] [associations]
symbol:DHX33 "Putative ATP-dependent RNA helicase DHX33"
species:9606 "Homo sapiens" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR007502
Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194
SMART:SM00490 SMART:SM00847 GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 EMBL:AC004148 HGNC:HGNC:16718 ChiTaRS:DHX33
Ensembl:ENST00000572490 Uniprot:I3L1L6
Length = 617
Score = 390 (142.3 bits), Expect = 1.5e-34, P = 1.5e-34
Identities = 81/214 (37%), Positives = 121/214 (56%)
Query: 2 DSLVVTPISQ-MAEFPLEPNLSKMLIMSVHLQCSDEVLTIVSMLSVQNVFYRPXXXXXXX 60
D L +TP+ + MA FPLEP +K ++MS C++E+LTIVS+LSV +V + P
Sbjct: 396 DQLTLTPMGRKMAAFPLEPKFAKTILMSPKFHCTEEILTIVSLLSVDSVLHNPPSRREEV 455
Query: 61 XXXXXXFNQMEGDHITLLAVYNSWRNNKFSNAWCYENFVQIRTLKRAQDVRKQLLGIMDR 120
F EGDH+TLL +Y +++N + WC ENFV + + +VR QL I +
Sbjct: 456 QGVRKKFISSEGDHMTLLNIYRTFKNLGGNKDWCKENFVNSKNMTLVAEVRAQLRDICLK 515
Query: 121 HKLDVVSAGKNTVRVQKAVCSGFFRNAAKKDPQEGYRTLVDSQVVYIHPSSALFNRQPEW 180
+ + S+ + V++ + F + A+ P Y T Q V IHPSS LF+ +P
Sbjct: 516 MSMPIASSRGDVESVRRCLAHSLFMSTAELQPDGTYATTDTHQPVAIHPSSVLFHCKPAC 575
Query: 181 VIYHELVQTTKEYMREVTSIDPKWLVEFAPAFFK 214
V+Y EL+ T K YMR++ ID +WL E AP +F+
Sbjct: 576 VVYTELLYTNKCYMRDLCVIDAQWLYEAAPEYFR 609
Score = 211 (79.3 bits), Expect = 3.5e-28, Sum P(2) = 3.5e-28
Identities = 46/107 (42%), Positives = 67/107 (62%)
Query: 231 EPLQRTNRISFPPGLLKQAVKKRPEI-----KLIVTSATLDAVKFSSYFFEAPIFTIPGR 285
E +RT G++K A K+R E+ K+IV SAT+D FS YF AP+ + GR
Sbjct: 105 EAHERTIHTDVLFGVVKAAQKRRKELGKLPLKVIVMSATMDVDLFSQYFNGAPVLYLEGR 164
Query: 286 TFPVEVLYTKEPETDYLDASLITVMQIHLREPPG-DVLLFLTGKLDV 331
P++V YTK+P+ DYL A+L++V QIH P D+L+FLTG+ ++
Sbjct: 165 QHPIQVFYTKQPQNDYLHAALVSVFQIHQEAPSSQDILVFLTGQEEI 211
Score = 183 (69.5 bits), Expect = 3.5e-28, Sum P(2) = 3.5e-28
Identities = 38/86 (44%), Positives = 57/86 (66%)
Query: 468 REEIDTACEILYERMKSLGPDVPELIILPVYSALPSEMQTRIFEAAPPGSRKVVIATNIA 527
+EEI+ + + K L P +++LP+Y++LP Q R+F+ AP G RKV+I+TNIA
Sbjct: 208 QEEIEAMSKTCRDIAKHLPDGCPAMLVLPLYASLPYAQQLRVFQGAPKGYRKVIISTNIA 267
Query: 528 ETSLTIDGIFYVVDPFDIEVRQAKYH 553
ETS+TI GI YVVD ++ + KY+
Sbjct: 268 ETSITITGIKYVVDTGMVKAK--KYN 291
Score = 179 (68.1 bits), Expect = 9.1e-28, Sum P(2) = 9.1e-28
Identities = 39/106 (36%), Positives = 59/106 (55%)
Query: 330 DVRKQLLGIMDRHKLDVVSAGKNTVRVQKAVCSGFFRNAAKKDPQEGYRTLVDSQVVYIH 389
+VR QL I + + + S+ + V++ + F + A+ P Y T Q V IH
Sbjct: 504 EVRAQLRDICLKMSMPIASSRGDVESVRRCLAHSLFMSTAELQPDGTYATTDTHQPVAIH 563
Query: 390 PSSALFNRQPEWVIYHELVQTTKEYMREVTSIDPKWLVEFAPAFFK 435
PSS LF+ +P V+Y EL+ T K YMR++ ID +WL E AP +F+
Sbjct: 564 PSSVLFHCKPACVVYTELLYTNKCYMRDLCVIDAQWLYEAAPEYFR 609
>UNIPROTKB|Q9H6R0 [details] [associations]
symbol:DHX33 "Putative ATP-dependent RNA helicase DHX33"
species:9606 "Homo sapiens" [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0033613 "activating transcription factor binding" evidence=IEA]
[GO:0045943 "positive regulation of transcription from RNA
polymerase I promoter" evidence=IDA] [GO:0005730 "nucleolus"
evidence=IDA] [GO:0005654 "nucleoplasm" evidence=IDA] [GO:0000182
"rDNA binding" evidence=IDA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 GO:GO:0005524 EMBL:CH471108 GO:GO:0005654
GO:GO:0005730 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
HOGENOM:HOG000175261 GO:GO:0000182 GO:GO:0045943 HOVERGEN:HBG039428
EMBL:AK025625 EMBL:AK026944 EMBL:AK295074 EMBL:AC004148
EMBL:BC030017 EMBL:CR936655 IPI:IPI00302860 IPI:IPI00655950
RefSeq:NP_001186628.1 RefSeq:NP_064547.2 UniGene:Hs.250456
ProteinModelPortal:Q9H6R0 SMR:Q9H6R0 IntAct:Q9H6R0
PhosphoSite:Q9H6R0 DMDM:296434478 PRIDE:Q9H6R0
Ensembl:ENST00000225296 GeneID:56919 KEGG:hsa:56919 UCSC:uc002gbz.3
CTD:56919 GeneCards:GC17M005360 HGNC:HGNC:16718 MIM:614405
neXtProt:NX_Q9H6R0 PharmGKB:PA27220 InParanoid:Q9H6R0 OMA:APDYFRR
OrthoDB:EOG46Q6S1 PhylomeDB:Q9H6R0 ChiTaRS:DHX33 GenomeRNAi:56919
NextBio:62420 ArrayExpress:Q9H6R0 Bgee:Q9H6R0 CleanEx:HS_DHX33
Genevestigator:Q9H6R0 GermOnline:ENSG00000005100 Uniprot:Q9H6R0
Length = 707
Score = 390 (142.3 bits), Expect = 3.0e-34, P = 3.0e-34
Identities = 81/214 (37%), Positives = 121/214 (56%)
Query: 2 DSLVVTPISQ-MAEFPLEPNLSKMLIMSVHLQCSDEVLTIVSMLSVQNVFYRPXXXXXXX 60
D L +TP+ + MA FPLEP +K ++MS C++E+LTIVS+LSV +V + P
Sbjct: 486 DQLTLTPMGRKMAAFPLEPKFAKTILMSPKFHCTEEILTIVSLLSVDSVLHNPPSRREEV 545
Query: 61 XXXXXXFNQMEGDHITLLAVYNSWRNNKFSNAWCYENFVQIRTLKRAQDVRKQLLGIMDR 120
F EGDH+TLL +Y +++N + WC ENFV + + +VR QL I +
Sbjct: 546 QGVRKKFISSEGDHMTLLNIYRTFKNLGGNKDWCKENFVNSKNMTLVAEVRAQLRDICLK 605
Query: 121 HKLDVVSAGKNTVRVQKAVCSGFFRNAAKKDPQEGYRTLVDSQVVYIHPSSALFNRQPEW 180
+ + S+ + V++ + F + A+ P Y T Q V IHPSS LF+ +P
Sbjct: 606 MSMPIASSRGDVESVRRCLAHSLFMSTAELQPDGTYATTDTHQPVAIHPSSVLFHCKPAC 665
Query: 181 VIYHELVQTTKEYMREVTSIDPKWLVEFAPAFFK 214
V+Y EL+ T K YMR++ ID +WL E AP +F+
Sbjct: 666 VVYTELLYTNKCYMRDLCVIDAQWLYEAAPEYFR 699
Score = 211 (79.3 bits), Expect = 5.6e-28, Sum P(2) = 5.6e-28
Identities = 46/107 (42%), Positives = 67/107 (62%)
Query: 231 EPLQRTNRISFPPGLLKQAVKKRPEI-----KLIVTSATLDAVKFSSYFFEAPIFTIPGR 285
E +RT G++K A K+R E+ K+IV SAT+D FS YF AP+ + GR
Sbjct: 195 EAHERTIHTDVLFGVVKAAQKRRKELGKLPLKVIVMSATMDVDLFSQYFNGAPVLYLEGR 254
Query: 286 TFPVEVLYTKEPETDYLDASLITVMQIHLREPPG-DVLLFLTGKLDV 331
P++V YTK+P+ DYL A+L++V QIH P D+L+FLTG+ ++
Sbjct: 255 QHPIQVFYTKQPQNDYLHAALVSVFQIHQEAPSSQDILVFLTGQEEI 301
Score = 183 (69.5 bits), Expect = 5.6e-28, Sum P(2) = 5.6e-28
Identities = 38/86 (44%), Positives = 57/86 (66%)
Query: 468 REEIDTACEILYERMKSLGPDVPELIILPVYSALPSEMQTRIFEAAPPGSRKVVIATNIA 527
+EEI+ + + K L P +++LP+Y++LP Q R+F+ AP G RKV+I+TNIA
Sbjct: 298 QEEIEAMSKTCRDIAKHLPDGCPAMLVLPLYASLPYAQQLRVFQGAPKGYRKVIISTNIA 357
Query: 528 ETSLTIDGIFYVVDPFDIEVRQAKYH 553
ETS+TI GI YVVD ++ + KY+
Sbjct: 358 ETSITITGIKYVVDTGMVKAK--KYN 381
Score = 179 (68.1 bits), Expect = 1.5e-27, Sum P(2) = 1.5e-27
Identities = 39/106 (36%), Positives = 59/106 (55%)
Query: 330 DVRKQLLGIMDRHKLDVVSAGKNTVRVQKAVCSGFFRNAAKKDPQEGYRTLVDSQVVYIH 389
+VR QL I + + + S+ + V++ + F + A+ P Y T Q V IH
Sbjct: 594 EVRAQLRDICLKMSMPIASSRGDVESVRRCLAHSLFMSTAELQPDGTYATTDTHQPVAIH 653
Query: 390 PSSALFNRQPEWVIYHELVQTTKEYMREVTSIDPKWLVEFAPAFFK 435
PSS LF+ +P V+Y EL+ T K YMR++ ID +WL E AP +F+
Sbjct: 654 PSSVLFHCKPACVVYTELLYTNKCYMRDLCVIDAQWLYEAAPEYFR 699
>CGD|CAL0002409 [details] [associations]
symbol:orf19.5865 species:5476 "Candida albicans" [GO:0071006
"U2-type catalytic step 1 spliceosome" evidence=IEA] [GO:0000349
"generation of catalytic spliceosome for first transesterification
step" evidence=IEA] [GO:0008186 "RNA-dependent ATPase activity"
evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR003593 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00382 SMART:SM00490 SMART:SM00847
CGD:CAL0002409 GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 EMBL:AACQ01000003 EMBL:AACQ01000004
eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
KO:K12814 RefSeq:XP_722935.1 RefSeq:XP_723081.1 GeneID:3635187
GeneID:3635307 KEGG:cal:CaO19.13287 KEGG:cal:CaO19.5865
Uniprot:Q5ANN5
Length = 865
Score = 251 (93.4 bits), Expect = 4.6e-34, Sum P(2) = 4.6e-34
Identities = 51/118 (43%), Positives = 78/118 (66%)
Query: 217 DPTKLSKFKKNQRLEPLQRTNRISFPPGLLKQAVK--KRPEIKLIVTSATLDAVKFSSYF 274
DPT L K+ E +RT LLK + ++ ++K+I+ SAT++A KFS +F
Sbjct: 339 DPT-LGKYSAIMIDEAHERTLSTEILLSLLKDVMMTTRKDDLKIIIASATINAEKFSQFF 397
Query: 275 FEAPIFTIPGRTFPVEVLYTKEPETDYLDASLITVMQIHLREP-PGDVLLFLTGKLDV 331
API IPGR FPV++ YTK+PE +Y+ A++ T+ QIH+ +P PGD+L+FLTG+ ++
Sbjct: 398 NNAPILNIPGRRFPVKIHYTKQPEANYIQAAITTIFQIHMTQPLPGDILVFLTGQDEI 455
Score = 240 (89.5 bits), Expect = 9.7e-17, P = 9.7e-17
Identities = 53/186 (28%), Positives = 99/186 (53%)
Query: 11 QMAEFPLEPNLSKMLIMSVHLQCSDEVLTIVSMLSVQ-NVFYRPXXXXXXXXXXXXXFNQ 69
+M+EFPL+P +K ++ S + ++++I++ML+ N+FYRP FN
Sbjct: 648 KMSEFPLDPVFTKCILTSDKFDNTKQIISIIAMLNESSNLFYRPKDKKELADKRKQEFND 707
Query: 70 MEGDHITLLAVYNSWRNNKFSNAWCYENFVQIRTLKRAQDVRKQLLGIMDRHKLDVVSAG 129
++GD LL ++ W ++ +S WC + F+Q +T+KR +++ +QL+ + + ++V S
Sbjct: 708 LQGDQFMLLKIWQQWVDSGYSVQWCQDYFIQYKTMKRIKNIYEQLIRLSKKIGIEVNSRH 767
Query: 130 K----------NTVRVQKAVCSGFFRNAAKKDPQ-EGYRTLVDSQ-----VVYIHPSSAL 173
+ N + K + SGFF N K P + Y+ L + + YIHPSS +
Sbjct: 768 QHRDHLQENTDNNTLLTKCLISGFFNNIVKLSPMGDCYQKLTNGKGGNNTPCYIHPSSCI 827
Query: 174 FNRQPE 179
+ +P+
Sbjct: 828 YKLKPK 833
Score = 201 (75.8 bits), Expect = 4.6e-34, Sum P(2) = 4.6e-34
Identities = 37/75 (49%), Positives = 55/75 (73%)
Query: 468 REEIDTACEILYERMKSLGPDVPELIILPVYSALPSEMQTRIFEAAPPGSRKVVIATNIA 527
++EI+T EIL + + LG + +I+ +Y+ LP E+Q +IF+ P +RK+V+ATNIA
Sbjct: 452 QDEIETMEEILRDSILKLGDQIDPMIVCSIYANLPQELQQKIFQPTPSNTRKIVLATNIA 511
Query: 528 ETSLTIDGIFYVVDP 542
ETS+TIDGI YV+DP
Sbjct: 512 ETSITIDGISYVIDP 526
Score = 136 (52.9 bits), Expect = 2.9e-27, Sum P(2) = 2.9e-27
Identities = 31/86 (36%), Positives = 49/86 (56%)
Query: 352 NTVRVQKAVCSGFFRNAAKKDPQ-EGYRTLVDSQ-----VVYIHPSSALFNRQPE--WVI 403
N + K + SGFF N K P + Y+ L + + YIHPSS ++ +P+ +++
Sbjct: 779 NNTLLTKCLISGFFNNIVKLSPMGDCYQKLTNGKGGNNTPCYIHPSSCIYKLKPKPKYLL 838
Query: 404 YHELVQTTKEYMREVTSIDPKWLVEF 429
Y+ELV T+KEYMR +D K + E+
Sbjct: 839 YYELVLTSKEYMRNCIILDEKLIKEY 864
Score = 136 (52.9 bits), Expect = 2.1e-05, P = 2.1e-05
Identities = 31/86 (36%), Positives = 49/86 (56%)
Query: 131 NTVRVQKAVCSGFFRNAAKKDPQ-EGYRTLVDSQ-----VVYIHPSSALFNRQPE--WVI 182
N + K + SGFF N K P + Y+ L + + YIHPSS ++ +P+ +++
Sbjct: 779 NNTLLTKCLISGFFNNIVKLSPMGDCYQKLTNGKGGNNTPCYIHPSSCIYKLKPKPKYLL 838
Query: 183 YHELVQTTKEYMREVTSIDPKWLVEF 208
Y+ELV T+KEYMR +D K + E+
Sbjct: 839 YYELVLTSKEYMRNCIILDEKLIKEY 864
>MGI|MGI:2445102 [details] [associations]
symbol:Dhx33 "DEAH (Asp-Glu-Ala-His) box polypeptide 33"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0000182 "rDNA binding" evidence=ISO;IDA]
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0005654
"nucleoplasm" evidence=ISO;IDA] [GO:0005730 "nucleolus"
evidence=ISO;IDA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0033613 "activating transcription factor binding" evidence=IPI]
[GO:0045943 "positive regulation of transcription from RNA
polymerase I promoter" evidence=ISO;IDA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 MGI:MGI:2445102
GO:GO:0005524 GO:GO:0005654 GO:GO:0005730 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 HOGENOM:HOG000175261 GO:GO:0000182
GO:GO:0045943 HOVERGEN:HBG039428 GeneTree:ENSGT00700000104241
CTD:56919 OMA:APDYFRR ChiTaRS:DHX33 EMBL:AK035177 EMBL:BC052172
IPI:IPI00410764 RefSeq:NP_848144.3 UniGene:Mm.35399
ProteinModelPortal:Q80VY9 SMR:Q80VY9 PhosphoSite:Q80VY9
PRIDE:Q80VY9 Ensembl:ENSMUST00000108527 GeneID:216877
KEGG:mmu:216877 InParanoid:Q80VY9 NextBio:375442 Bgee:Q80VY9
CleanEx:MM_DHX33 Genevestigator:Q80VY9
GermOnline:ENSMUSG00000040620 Uniprot:Q80VY9
Length = 698
Score = 387 (141.3 bits), Expect = 7.5e-34, P = 7.5e-34
Identities = 81/214 (37%), Positives = 120/214 (56%)
Query: 2 DSLVVTPISQ-MAEFPLEPNLSKMLIMSVHLQCSDEVLTIVSMLSVQNVFYRPXXXXXXX 60
D L +TPI + MA FPLEP +K +++S C++E+LTIVS+LSV +V Y P
Sbjct: 477 DQLTLTPIGRKMAAFPLEPRFAKTILLSSKFHCTEEILTIVSLLSVDSVLYNPPARRDEV 536
Query: 61 XXXXXXFNQMEGDHITLLAVYNSWRNNKFSNAWCYENFVQIRTLKRAQDVRKQLLGIMDR 120
F EGDHITLL +Y +++N + WC ENFV + + +VR QL I +
Sbjct: 537 QSVRKKFISSEGDHITLLNIYRTFKNIGGNKDWCKENFVNSKNMLLVAEVRAQLREICLK 596
Query: 121 HKLDVVSAGKNTVRVQKAVCSGFFRNAAKKDPQEGYRTLVDSQVVYIHPSSALFNRQPEW 180
+ ++S+ + V++ + F N A+ Y T Q V IHPSS LF+ +P
Sbjct: 597 MSMPIMSSRGDMESVRRCMAHSLFMNTAELQTDGTYATTDTHQPVAIHPSSVLFHCKPAC 656
Query: 181 VIYHELVQTTKEYMREVTSIDPKWLVEFAPAFFK 214
V+Y L+ T K YMR++ +D +WL E AP +F+
Sbjct: 657 VVYTSLLYTNKCYMRDLCVVDAEWLYEAAPDYFR 690
Score = 212 (79.7 bits), Expect = 5.3e-28, Sum P(2) = 5.3e-28
Identities = 58/155 (37%), Positives = 87/155 (56%)
Query: 185 ELVQTTKEYMREVTSIDP--KWLVEFAPAFFKFSDPTKLSKFKKNQRLEPLQRTNRISFP 242
+LV T + +VTS D K+L + SD + L K+ E +RT
Sbjct: 140 KLVGYTVRF-EDVTSEDTRIKFLTDGMLLREAISD-SLLRKYSCVILDEAHERTIHTDVL 197
Query: 243 PGLLKQAVKKRPEI-----KLIVTSATLDAVKFSSYFFEAPIFTIPGRTFPVEVLYTKEP 297
G++K A K+R E+ K+IV SAT+D FS YF AP+ + GR P+++ YTK+P
Sbjct: 198 FGVVKTAQKRRKELGKLPLKVIVMSATMDVDLFSQYFNRAPVLYLEGRQHPIQIFYTKQP 257
Query: 298 ETDYLDASLITVMQIHLREPPG-DVLLFLTGKLDV 331
+ DYL A+L++V QIH P D+L+FLTG+ ++
Sbjct: 258 QQDYLHAALVSVFQIHQEAPASQDILVFLTGQEEI 292
Score = 182 (69.1 bits), Expect = 5.3e-28, Sum P(2) = 5.3e-28
Identities = 37/86 (43%), Positives = 57/86 (66%)
Query: 468 REEIDTACEILYERMKSLGPDVPELIILPVYSALPSEMQTRIFEAAPPGSRKVVIATNIA 527
+EEI+ + + + L P +++LP+Y++LP Q R+F+ AP G RKV+I+TNIA
Sbjct: 289 QEEIEAMSKTCRDIARHLPDGCPSMLVLPLYASLPYSQQLRVFQGAPKGYRKVIISTNIA 348
Query: 528 ETSLTIDGIFYVVDPFDIEVRQAKYH 553
ETS+TI GI YVVD ++ + KY+
Sbjct: 349 ETSITITGIKYVVDTGMVKAK--KYN 372
Score = 168 (64.2 bits), Expect = 1.5e-26, Sum P(2) = 1.5e-26
Identities = 37/106 (34%), Positives = 58/106 (54%)
Query: 330 DVRKQLLGIMDRHKLDVVSAGKNTVRVQKAVCSGFFRNAAKKDPQEGYRTLVDSQVVYIH 389
+VR QL I + + ++S+ + V++ + F N A+ Y T Q V IH
Sbjct: 585 EVRAQLREICLKMSMPIMSSRGDMESVRRCMAHSLFMNTAELQTDGTYATTDTHQPVAIH 644
Query: 390 PSSALFNRQPEWVIYHELVQTTKEYMREVTSIDPKWLVEFAPAFFK 435
PSS LF+ +P V+Y L+ T K YMR++ +D +WL E AP +F+
Sbjct: 645 PSSVLFHCKPACVVYTSLLYTNKCYMRDLCVVDAEWLYEAAPDYFR 690
>POMBASE|SPAC2G11.11c [details] [associations]
symbol:prh1 "ATP-dependent RNA helicase Prh1
(predicted)" species:4896 "Schizosaccharomyces pombe" [GO:0003723
"RNA binding" evidence=IEA] [GO:0004004 "ATP-dependent RNA helicase
activity" evidence=ISO] [GO:0005524 "ATP binding" evidence=ISM]
[GO:0005730 "nucleolus" evidence=ISO;IDA] [GO:0042254 "ribosome
biogenesis" evidence=ISO] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR003593 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00382 SMART:SM00490 SMART:SM00847
PomBase:SPAC2G11.11c GO:GO:0005524 EMBL:CU329670 GO:GO:0005730
GenomeReviews:CU329670_GR GO:GO:0006397 GO:GO:0042254 GO:GO:0003723
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643
InterPro:IPR011709 Pfam:PF07717 GO:GO:0004004 HOGENOM:HOG000175261
KO:K14781 OrthoDB:EOG4F7RTB EMBL:D13249 PIR:S35546 PIR:S62466
RefSeq:NP_593091.1 ProteinModelPortal:Q03319
EnsemblFungi:SPAC2G11.11c.1 GeneID:2541750 KEGG:spo:SPAC2G11.11c
OMA:MANDTTI NextBio:20802841 Uniprot:Q03319
Length = 719
Score = 305 (112.4 bits), Expect = 1.7e-23, Sum P(2) = 1.7e-23
Identities = 71/206 (34%), Positives = 108/206 (52%)
Query: 11 QMAEFPLEPNLSKMLIMSVHLQCSDEVLTIVSMLSVQNVFYRPXXXXXXXXXXXXXFNQM 70
QM+ PL P+L++ ++ + C EV+ +VS LS ++F P F
Sbjct: 509 QMSLIPLLPSLARAVLAAREHNCLSEVIDVVSCLSTDSMFLFPQEKRDEAIEARLKFLHS 568
Query: 71 EGDHITLLAVYNSWRNNKFSNA--WCYENFVQIRTLKRAQDVRKQLLG--IMDRHKLDVV 126
EGD +T L + + + WC +NF+ R LK D+RKQL + D +L+
Sbjct: 569 EGDLLTCLNALRQYLESSHDSRKQWCSQNFINRRALKTILDIRKQLREHCLKDGWELNS- 627
Query: 127 SAGKNTVRVQKAVCSGFFRNAAKKDPQEGYRTLVDSQVVYIHPSSALFNRQPEWVIYHEL 186
S N+ + + SG+ N A P YRT++ +Q + IHPSS+LF ++ E ++YHEL
Sbjct: 628 SPEVNSENLLLSFLSGYITNTALLHPDGSYRTIIGNQTISIHPSSSLFGKKVEAIMYHEL 687
Query: 187 VQTTKEYMREVTSIDPKWLVEFAPAF 212
V TTK Y+R V+SI WL AP +
Sbjct: 688 VFTTKSYVRGVSSIRSNWLNAVAPHY 713
Score = 244 (91.0 bits), Expect = 1.0e-32, Sum P(2) = 1.0e-32
Identities = 51/116 (43%), Positives = 76/116 (65%)
Query: 216 SDPTKLSKFKKNQRLEPLQRTNRISFPPGLLKQAVKKRPEIKLIVTSATLDAVKFSSYFF 275
+DP LS++ E +RT G +K+ +KKRP +++I+ SATL+A +FS +F
Sbjct: 203 NDPI-LSQYHTLILDEAHERTLMTDMLLGFVKKIIKKRPALRVIIMSATLNAERFSEFFD 261
Query: 276 EAPIFTIPGRTFPVEVLYTKEPETDYLDASLITVMQIHLREPPGDVLLFLTGKLDV 331
A I I GR +PV++ YT PE DYLDA L T+ Q+H + PPGD+L+FLTG+ ++
Sbjct: 262 GAEICYISGRQYPVQIHYTYTPEPDYLDACLRTIFQLHTKLPPGDILVFLTGQDEI 317
Score = 193 (73.0 bits), Expect = 1.0e-32, Sum P(2) = 1.0e-32
Identities = 44/107 (41%), Positives = 64/107 (59%)
Query: 329 LDVRKQLLG--IMDRHKLDVVSAGKNTVRVQKAVCSGFFRNAAKKDPQEGYRTLVDSQVV 386
LD+RKQL + D +L+ S N+ + + SG+ N A P YRT++ +Q +
Sbjct: 608 LDIRKQLREHCLKDGWELNS-SPEVNSENLLLSFLSGYITNTALLHPDGSYRTIIGNQTI 666
Query: 387 YIHPSSALFNRQPEWVIYHELVQTTKEYMREVTSIDPKWLVEFAPAF 433
IHPSS+LF ++ E ++YHELV TTK Y+R V+SI WL AP +
Sbjct: 667 SIHPSSSLFGKKVEAIMYHELVFTTKSYVRGVSSIRSNWLNAVAPHY 713
Score = 152 (58.6 bits), Expect = 2.0e-28, Sum P(2) = 2.0e-28
Identities = 31/82 (37%), Positives = 53/82 (64%)
Query: 468 REEIDTACEILYERMKSLGPDVPELIILPVYSALPSEMQTRIFEAAPPGSRKVVIATNIA 527
++EI+ ++ K L ++P++ P++++LP E Q ++F A RKVV++TNIA
Sbjct: 314 QDEIEALEALIKSYSKQLPSNLPQIQACPLFASLPQEQQLQVFLPALANHRKVVLSTNIA 373
Query: 528 ETSLTIDGIFYVVDPFDIEVRQ 549
ETS+TI GI YV+D +++Q
Sbjct: 374 ETSVTISGIRYVIDTGLAKIKQ 395
Score = 38 (18.4 bits), Expect = 1.7e-23, Sum P(2) = 1.7e-23
Identities = 8/13 (61%), Positives = 10/13 (76%)
Query: 1 MDSLVVTPISQMA 13
++SL V PISQ A
Sbjct: 402 LESLTVQPISQSA 414
>TAIR|locus:2197965 [details] [associations]
symbol:AT1G26370 species:3702 "Arabidopsis thaliana"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0003724 "RNA helicase activity"
evidence=ISS] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=ISM] [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] InterPro:IPR001650 InterPro:IPR003593
InterPro:IPR007502 Pfam:PF00271 Pfam:PF04408 PROSITE:PS51194
SMART:SM00382 SMART:SM00490 SMART:SM00847 EMBL:CP002684
GO:GO:0005524 GO:GO:0003676 GO:GO:0004386 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717
IPI:IPI00532541 RefSeq:NP_173961.3 UniGene:At.15978
ProteinModelPortal:F4IE66 SMR:F4IE66 PRIDE:F4IE66
EnsemblPlants:AT1G26370.1 GeneID:839179 KEGG:ath:AT1G26370
OMA:ADISTNI Uniprot:F4IE66
Length = 717
Score = 378 (138.1 bits), Expect = 1.3e-32, P = 1.3e-32
Identities = 82/231 (35%), Positives = 131/231 (56%)
Query: 2 DSLVVTPIS-QMAEFPLEPNLSKMLIMSVHLQCSDEVLTIVSMLSVQNVFYRPXXXXXXX 60
D + P+ QM+ PLEP SK LI++ C +E+L V++LSV+++FY P
Sbjct: 487 DGKLENPVGYQMSRLPLEPVYSKALILANQFNCLEEMLITVAVLSVESIFYDPREKREEA 546
Query: 61 XXXXXXFNQMEGDHITLLAVYN-------------SWRN-NKFSNAWCYENFVQIRTLKR 106
F +EGDH+T L+VY S N +K WC EN+V R+LK
Sbjct: 547 RTSKNHFASVEGDHLTYLSVYRESDEFLEKRKAAGSGNNIDKIMKKWCKENYVNSRSLKH 606
Query: 107 AQDVRKQLLGIMDRHKLDVVSAGKNTVRVQKAVCSGFFRNAAKKDPQEGYRTLVDSQVVY 166
A+D+ +Q+ +++ +V S G + + ++ + + FF AA++ YR L +VV+
Sbjct: 607 ARDIYRQIREHVEQIGFNVSSCGNDMLAFRRCLAASFFLKAAQRQLDGTYRALESGEVVH 666
Query: 167 IHPSSALFNRQPEWVIYHELVQTTKEYMREVTSIDPKWLVEFAPAFFKFSD 217
IHP+S LF +PE VI++EL+QT+K+Y++ +T ID WL E AP F+ ++
Sbjct: 667 IHPTSVLFRAKPECVIFNELMQTSKKYIKNLTIIDSLWLSELAPHHFQTAE 717
Score = 233 (87.1 bits), Expect = 1.6e-32, Sum P(2) = 1.6e-32
Identities = 51/104 (49%), Positives = 70/104 (67%)
Query: 233 LQRTNRISFPP---GLLK--QAVKKRPEIKLIVTSATLDAVKFSSYFFEAPIFTIPGRTF 287
+Q T R + P G+LK Q K P +KLI+ SA+LDA FS YF A + GR F
Sbjct: 202 VQTTTRDANGPQQNGVLKGYQGRKLSP-LKLIIMSASLDARVFSEYFGGAKAVHVQGRQF 260
Query: 288 PVEVLYTKEPETDYLDASLITVMQIHLREPPGDVLLFLTGKLDV 331
PV++LYT PE+DY+DA+L+T+ QIH E PGD+L+FLTG+ ++
Sbjct: 261 PVDILYTVHPESDYVDATLVTIFQIHFEEKPGDILVFLTGQDEI 304
Score = 203 (76.5 bits), Expect = 1.6e-32, Sum P(2) = 1.6e-32
Identities = 39/109 (35%), Positives = 69/109 (63%)
Query: 330 DVRKQLLGIMDRHKLDVVSAGKNTVRVQKAVCSGFFRNAAKKDPQEGYRTLVDSQVVYIH 389
D+ +Q+ +++ +V S G + + ++ + + FF AA++ YR L +VV+IH
Sbjct: 609 DIYRQIREHVEQIGFNVSSCGNDMLAFRRCLAASFFLKAAQRQLDGTYRALESGEVVHIH 668
Query: 390 PSSALFNRQPEWVIYHELVQTTKEYMREVTSIDPKWLVEFAPAFFKFSD 438
P+S LF +PE VI++EL+QT+K+Y++ +T ID WL E AP F+ ++
Sbjct: 669 PTSVLFRAKPECVIFNELMQTSKKYIKNLTIIDSLWLSELAPHHFQTAE 717
Score = 199 (75.1 bits), Expect = 4.2e-32, Sum P(2) = 4.2e-32
Identities = 38/81 (46%), Positives = 60/81 (74%)
Query: 468 REEIDTACEILYERMKSLGPDVPELIILPVYSALPSEMQTRIFEAAPPGSRKVVIATNIA 527
++EI++ ++ ER++++ D +L+ L ++SALPSE Q ++F AP G RKV++ATNIA
Sbjct: 301 QDEIESVERLVQERLQNIPEDKRKLLPLAIFSALPSEQQMKVFAPAPTGFRKVILATNIA 360
Query: 528 ETSLTIDGIFYVVDPFDIEVR 548
ETS+TI GI YV+DP ++ R
Sbjct: 361 ETSITIPGIRYVIDPGFVKAR 381
Score = 39 (18.8 bits), Expect = 1.3e-11, Sum P(2) = 1.3e-11
Identities = 16/52 (30%), Positives = 26/52 (50%)
Query: 305 SLITVMQIHLREPPGDVLLFLTGKLDVRKQLLGIMDRHKL-DVVSAGKNTVR 355
S+I V + H R DVLL L K+ R + + ++ + +V S + T R
Sbjct: 157 SVIIVDEAHDRSVHTDVLLALLKKIQ-RTRSQPVSEKTEFGNVASQVQTTTR 207
Score = 37 (18.1 bits), Expect = 3.5e-15, Sum P(2) = 3.5e-15
Identities = 11/29 (37%), Positives = 17/29 (58%)
Query: 531 LTIDGIFYVVDPFDI--EVRQAKYHRCAV 557
L+++ IFY DP + E R +K H +V
Sbjct: 530 LSVESIFY--DPREKREEARTSKNHFASV 556
>UNIPROTKB|E2RQN7 [details] [associations]
symbol:DHX35 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 Pfam:PF00271 Pfam:PF04408
PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
GeneTree:ENSGT00700000104241 OMA:NIFVVPP EMBL:AAEX03013926
Ensembl:ENSCAFT00000014371 Uniprot:E2RQN7
Length = 702
Score = 362 (132.5 bits), Expect = 1.1e-30, P = 1.1e-30
Identities = 83/233 (35%), Positives = 137/233 (58%)
Query: 2 DSLVVTPIS-QMAEFPLEPNLSKMLIMSVHLQCSDEVLTIVSMLSVQNVFYRPXXXXXXX 60
D + P+ ++AEFPL P +KML+ S + CS E+L+I +M+ +QN+F P
Sbjct: 472 DCRLTEPLGMRVAEFPLNPMFAKMLLESGNFGCSQEILSIAAMMQIQNIFVVPGNQKSQA 531
Query: 61 XXXXXXFNQMEGDHITLLAVYNSW-RNNKFSNAWCYENFVQIRTLKRAQDVRKQLLGIMD 119
F EGDH+T+L VY ++ ++NK S WC E+F+ + L RA VR+QL ++
Sbjct: 532 IRVHRKFAVEEGDHLTMLNVYEAFIKHNKNSQ-WCQEHFLNYKGLIRAATVREQLKKLLV 590
Query: 120 RHKLDVVSAGKNTVRVQKAVCSGFFRNAAKKDPQEGYRTLVDSQVVYIHPSSALFNRQ-P 178
+ ++ S+ + V + + SGFF NAA+ Y ++ +Y++ + LFNR+
Sbjct: 591 KFQVPKKSSEGDPDPVLRCIVSGFFANAARFHSTGAYSVILSPHSLYLYYLT-LFNRKFL 649
Query: 179 EWVIYHELVQTTKEYMREVTSIDPKWLVEFAPAFFKFSDPTKLSKFKKNQRLE 231
+ VIY+E++QT+K YMR+VT+I+ WL+E AP F++ T LS K +++
Sbjct: 650 QKVIYNEVIQTSKYYMRDVTAIESAWLLELAPHFYQ--QGTHLSLKAKRAKVQ 700
Score = 209 (78.6 bits), Expect = 1.0e-26, Sum P(2) = 1.0e-26
Identities = 51/125 (40%), Positives = 74/125 (59%)
Query: 217 DPTKLSKFKKNQRLEPLQRTNRISFPPGLLKQAVKKRPEIKLIVTSATLDAVKFSSYFFE 276
DP L+K+ E +RT GLLK+ +KR +++L+V SATLDA KF +F +
Sbjct: 164 DPL-LTKYSAIMLDEAHERTLYTDIAIGLLKKIQRKRGDLRLLVASATLDAEKFRDFFNQ 222
Query: 277 A----P------IFTIPGRTFPVEVLYTKEPETDYLDASLITVMQIHLREPPGDVLLFLT 326
P I T+ GRTFPV++ Y + P DY+ +++ TVM+IH E GD+L FLT
Sbjct: 223 NETSDPTRDTCVILTVEGRTFPVDIFYLQSPVPDYIKSTVETVMKIHQTEGDGDILAFLT 282
Query: 327 GKLDV 331
G+ +V
Sbjct: 283 GQEEV 287
Score = 173 (66.0 bits), Expect = 1.0e-26, Sum P(2) = 1.0e-26
Identities = 42/123 (34%), Positives = 74/123 (60%)
Query: 331 VRKQLLGIMDRHKLDVVSAGKNTVRVQKAVCSGFFRNAAKKDPQEGYRTLVDSQVVYIHP 390
VR+QL ++ + ++ S+ + V + + SGFF NAA+ Y ++ +Y++
Sbjct: 581 VREQLKKLLVKFQVPKKSSEGDPDPVLRCIVSGFFANAARFHSTGAYSVILSPHSLYLYY 640
Query: 391 SSALFNRQ-PEWVIYHELVQTTKEYMREVTSIDPKWLVEFAPAFFKFSDPTKLSKFKKNQ 449
+ LFNR+ + VIY+E++QT+K YMR+VT+I+ WL+E AP F++ T LS K
Sbjct: 641 LT-LFNRKFLQKVIYNEVIQTSKYYMRDVTAIESAWLLELAPHFYQ--QGTHLSLKAKRA 697
Query: 450 RLE 452
+++
Sbjct: 698 KVQ 700
Score = 171 (65.3 bits), Expect = 1.6e-26, Sum P(2) = 1.6e-26
Identities = 36/88 (40%), Positives = 58/88 (65%)
Query: 463 AWRISREEIDTACEILYERMKSLGPDVPE--LIILPVYSALPSEMQTRIFEAAPPGSRKV 520
A+ +EE++T +L E+ ++LG + L +LP+Y+ LPS Q ++FE RKV
Sbjct: 279 AFLTGQEEVETVVSMLIEQARALGRTGMKRHLRVLPMYAGLPSFEQMKVFERVSRSVRKV 338
Query: 521 VIATNIAETSLTIDGIFYVVDPFDIEVR 548
++ATN+AETS+TI GI YV+D +++R
Sbjct: 339 IVATNVAETSITISGIVYVIDCGFVKLR 366
>TAIR|locus:2010549 [details] [associations]
symbol:AT1G27900 species:3702 "Arabidopsis thaliana"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0004004 "ATP-dependent RNA helicase
activity" evidence=ISS] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=ISM] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] [GO:0006310 "DNA recombination"
evidence=RCA] [GO:0007062 "sister chromatid cohesion" evidence=RCA]
[GO:0007126 "meiosis" evidence=RCA] [GO:0007131 "reciprocal meiotic
recombination" evidence=RCA] [GO:0010332 "response to gamma
radiation" evidence=RCA] [GO:0010413 "glucuronoxylan metabolic
process" evidence=RCA] [GO:0032204 "regulation of telomere
maintenance" evidence=RCA] [GO:0033044 "regulation of chromosome
organization" evidence=RCA] [GO:0042138 "meiotic DNA double-strand
break formation" evidence=RCA] [GO:0043247 "telomere maintenance in
response to DNA damage" evidence=RCA] [GO:0045132 "meiotic
chromosome segregation" evidence=RCA] [GO:0045492 "xylan
biosynthetic process" evidence=RCA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR003593 InterPro:IPR007502
Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194
SMART:SM00382 SMART:SM00490 SMART:SM00847 EMBL:CP002684
GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 HOGENOM:HOG000175261 KO:K12818 EMBL:AY054692
EMBL:AY128718 IPI:IPI00545738 RefSeq:NP_564296.1 UniGene:At.25438
ProteinModelPortal:Q93Y16 SMR:Q93Y16 PaxDb:Q93Y16 PRIDE:Q93Y16
EnsemblPlants:AT1G27900.1 GeneID:839683 KEGG:ath:AT1G27900
TAIR:At1g27900 InParanoid:Q93Y16 OMA:NCRRFIV PhylomeDB:Q93Y16
ProtClustDB:CLSN2688039 ArrayExpress:Q93Y16 Genevestigator:Q93Y16
Uniprot:Q93Y16
Length = 700
Score = 302 (111.4 bits), Expect = 8.6e-24, P = 8.6e-24
Identities = 75/221 (33%), Positives = 118/221 (53%)
Query: 6 VTPISQ-MAEFPLEPNLSKMLIMSVHLQCSDEVLTIVSMLSVQNVFY----RPXXXXXXX 60
+T I + M++ PLEP+LS+ LI + C + LT+V+MLS + +P
Sbjct: 416 ITRIGRTMSDLPLEPSLSRTLIEANETGCLSQALTVVAMLSAETTLLPARSKPSEKKRKH 475
Query: 61 XXXXXXFNQME-GDHITLLAVYNSWRNNKFSNAWCYENFVQIRTLKRAQDVRKQLLGIMD 119
N GDHI LL ++ SW + WC EN +Q+R + +DVR+QL IM
Sbjct: 476 DEDSNLPNGSGYGDHIQLLQIFESWDRTNYDPVWCKENGMQVRGMVFVKDVRRQLCQIMQ 535
Query: 120 R---HKLDVVSAGKNTV------RVQKAVCSGFFRNAAKKDPQE-GYRTL-VDSQVVYIH 168
+ +L+V + G+ + +++KA+C G A++ + GYRTL SQ+V +H
Sbjct: 536 KISKDRLEVGADGRKSSSRDDYRKLRKALCVGNANQIAERMLRHNGYRTLSFQSQLVQVH 595
Query: 169 PSSALF----NRQPEWVIYHELVQTTKEYMREVTSIDPKWL 205
PSS L P +V+YHEL+ TT+ +MR V ++D W+
Sbjct: 596 PSSVLSADNDGMMPNYVVYHELISTTRPFMRNVCAVDMAWV 636
Score = 230 (86.0 bits), Expect = 1.3e-29, Sum P(2) = 1.3e-29
Identities = 41/91 (45%), Positives = 64/91 (70%)
Query: 244 GLLKQAVKKRPE-IKLIVTSATLDAVKFSSYFFEAPIFTIPGRTFPVEVLYTKEPETDYL 302
GL+K+ V+ R K+++TSATLD K S +F P+ +PG+ +PVE+LY+KE Y+
Sbjct: 138 GLVKRLVRIRASNFKVLITSATLDGEKVSEFFSGCPVLNVPGKLYPVEILYSKERPVSYI 197
Query: 303 DASLITVMQIHLREPPGDVLLFLTGKLDVRK 333
++SL + IH+REP GD+L+F+TG+ D+ K
Sbjct: 198 ESSLKVAIDIHVREPEGDILIFMTGQDDIEK 228
Score = 178 (67.7 bits), Expect = 1.3e-29, Sum P(2) = 1.3e-29
Identities = 34/83 (40%), Positives = 55/83 (66%)
Query: 468 REEIDTACEILYERMKSLGP-DVPELIILPVYSALPSEMQTRIFEAAPPGSRKVVIATNI 526
+++I+ L E+++SL + II P++ +LP EMQ R+F PP R+ +++TNI
Sbjct: 223 QDDIEKLVSRLEEKVRSLAEGSCMDAIIYPLHGSLPPEMQVRVFSPPPPNCRRFIVSTNI 282
Query: 527 AETSLTIDGIFYVVDPFDIEVRQ 549
AETSLT+DG+ YV+D ++ RQ
Sbjct: 283 AETSLTVDGVVYVIDSGYVKQRQ 305
Score = 164 (62.8 bits), Expect = 3.9e-28, Sum P(2) = 3.9e-28
Identities = 56/173 (32%), Positives = 87/173 (50%)
Query: 330 DVRKQLLGIMDR---HKLDVVSAGKNTV------RVQKAVCSGFFRNAAKKDPQE-GYRT 379
DVR+QL IM + +L+V + G+ + +++KA+C G A++ + GYRT
Sbjct: 525 DVRRQLCQIMQKISKDRLEVGADGRKSSSRDDYRKLRKALCVGNANQIAERMLRHNGYRT 584
Query: 380 L-VDSQVVYIHPSSALF----NRQPEWVIYHELVQTTKEYMREVTSIDPKWLVEFAPAFF 434
L SQ+V +HPSS L P +V+YHEL+ TT+ +MR V ++D W+
Sbjct: 585 LSFQSQLVQVHPSSVLSADNDGMMPNYVVYHELISTTRPFMRNVCAVDMAWVAPIKRKIE 644
Query: 435 KFSDPTKLS-----KFK-KNQRLEPLYNKYEEPNAWRISREEIDTACEILYER 481
K + KLS FK ++ E N E P +S E +++ E ER
Sbjct: 645 KLN-VRKLSGGPAPSFKVPEEKTELSKNNAETP---AVS-ENVESRIEAARER 692
>UNIPROTKB|H9KZI9 [details] [associations]
symbol:LOC100858239 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0003723 "RNA binding" evidence=IEA] [GO:0005524
"ATP binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] InterPro:IPR002464 InterPro:IPR003029
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00575 PROSITE:PS00690
PROSITE:PS50126 GO:GO:0005524 GO:GO:0003723 Gene3D:2.40.50.140
InterPro:IPR012340 SUPFAM:SSF50249 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 InterPro:IPR022967 SMART:SM00316
GeneTree:ENSGT00700000104241 EMBL:AADN02006936
Ensembl:ENSGALT00000013764 OMA:CRERERG Uniprot:H9KZI9
Length = 692
Score = 351 (128.6 bits), Expect = 2.1e-29, P = 2.1e-29
Identities = 69/97 (71%), Positives = 81/97 (83%)
Query: 231 EPLQRTNRISFPPGLLKQAVKKRPEIKLIVTSATLDAVKFSSYFFEAPIFTIPGRTFPVE 290
E +RT GLLK+ V+KR ++KLIVTSATLDAVKFS YF+EAPIFTIPGRT+PVE
Sbjct: 596 EAHERTIHTDVLFGLLKKTVQKRQDMKLIVTSATLDAVKFSQYFYEAPIFTIPGRTYPVE 655
Query: 291 VLYTKEPETDYLDASLITVMQIHLREPPGDVLLFLTG 327
+LYTKEPETDYLDASLITVMQIHL EPPG+ ++ + G
Sbjct: 656 ILYTKEPETDYLDASLITVMQIHLTEPPGEWIVMIHG 692
>UNIPROTKB|E2RQN1 [details] [associations]
symbol:DHX35 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 Pfam:PF00271 Pfam:PF04408
PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
GeneTree:ENSGT00700000104241 EMBL:AAEX03013926
Ensembl:ENSCAFT00000014378 NextBio:20859776 Uniprot:E2RQN1
Length = 698
Score = 348 (127.6 bits), Expect = 4.8e-29, P = 4.8e-29
Identities = 85/238 (35%), Positives = 135/238 (56%)
Query: 2 DSLVVTPIS-QMAEFPLEPNLSKMLIMSVHLQCSDEVLTIVSMLSVQNVFYRPXXXXXXX 60
D + P+ ++AEFPL P +KML+ S + CS E+L+I +M+ +QN+F P
Sbjct: 464 DCRLTEPLGMRVAEFPLNPMFAKMLLESGNFGCSQEILSIAAMMQIQNIFVVPGNQKSQA 523
Query: 61 XXXXXXFNQMEGDHITLLAVYNSW-RNNKFSNAWCYENFVQIRTLKRAQDVRKQLLGIMD 119
F EGDH+T+L VY ++ ++NK S WC E+F+ + L RA VR+QL ++
Sbjct: 524 IRVHRKFAVEEGDHLTMLNVYEAFIKHNKNSQ-WCQEHFLNYKGLIRAATVREQLKKLLV 582
Query: 120 RHKLDVVSAGKNTVRVQKAVCSGFFRNAAKKDPQEGY-RTLVDS-QVVYIHPSSALFNRQ 177
+ ++ S+ + V + + SGFF NAA+ Y RTL S + +H + + Q
Sbjct: 583 KFQVPKKSSEGDPDPVLRCIVSGFFANAARFHSTGAYSRTLAHSGREAQVHLFTVVPGTQ 642
Query: 178 PE-W---VIYHELVQTTKEYMREVTSIDPKWLVEFAPAFFKFSDPTKLSKFKKNQRLE 231
W VIY+E++QT+K YMR+VT+I+ WL+E AP F++ T LS K +++
Sbjct: 643 SRYWGFRVIYNEVIQTSKYYMRDVTAIESAWLLELAPHFYQ--QGTHLSLKAKRAKVQ 698
Score = 209 (78.6 bits), Expect = 1.6e-26, Sum P(2) = 1.6e-26
Identities = 51/125 (40%), Positives = 74/125 (59%)
Query: 217 DPTKLSKFKKNQRLEPLQRTNRISFPPGLLKQAVKKRPEIKLIVTSATLDAVKFSSYFFE 276
DP L+K+ E +RT GLLK+ +KR +++L+V SATLDA KF +F +
Sbjct: 156 DPL-LTKYSAIMLDEAHERTLYTDIAIGLLKKIQRKRGDLRLLVASATLDAEKFRDFFNQ 214
Query: 277 A----P------IFTIPGRTFPVEVLYTKEPETDYLDASLITVMQIHLREPPGDVLLFLT 326
P I T+ GRTFPV++ Y + P DY+ +++ TVM+IH E GD+L FLT
Sbjct: 215 NETSDPTRDTCVILTVEGRTFPVDIFYLQSPVPDYIKSTVETVMKIHQTEGDGDILAFLT 274
Query: 327 GKLDV 331
G+ +V
Sbjct: 275 GQEEV 279
Score = 171 (65.3 bits), Expect = 1.6e-26, Sum P(2) = 1.6e-26
Identities = 36/88 (40%), Positives = 58/88 (65%)
Query: 463 AWRISREEIDTACEILYERMKSLGPDVPE--LIILPVYSALPSEMQTRIFEAAPPGSRKV 520
A+ +EE++T +L E+ ++LG + L +LP+Y+ LPS Q ++FE RKV
Sbjct: 271 AFLTGQEEVETVVSMLIEQARALGRTGMKRHLRVLPMYAGLPSFEQMKVFERVSRSVRKV 330
Query: 521 VIATNIAETSLTIDGIFYVVDPFDIEVR 548
++ATN+AETS+TI GI YV+D +++R
Sbjct: 331 IVATNVAETSITISGIVYVIDCGFVKLR 358
Score = 159 (61.0 bits), Expect = 2.9e-25, Sum P(2) = 2.9e-25
Identities = 44/128 (34%), Positives = 72/128 (56%)
Query: 331 VRKQLLGIMDRHKLDVVSAGKNTVRVQKAVCSGFFRNAAKKDPQEGY-RTLVDS-QVVYI 388
VR+QL ++ + ++ S+ + V + + SGFF NAA+ Y RTL S + +
Sbjct: 573 VREQLKKLLVKFQVPKKSSEGDPDPVLRCIVSGFFANAARFHSTGAYSRTLAHSGREAQV 632
Query: 389 HPSSALFNRQPE-W---VIYHELVQTTKEYMREVTSIDPKWLVEFAPAFFKFSDPTKLSK 444
H + + Q W VIY+E++QT+K YMR+VT+I+ WL+E AP F++ T LS
Sbjct: 633 HLFTVVPGTQSRYWGFRVIYNEVIQTSKYYMRDVTAIESAWLLELAPHFYQ--QGTHLSL 690
Query: 445 FKKNQRLE 452
K +++
Sbjct: 691 KAKRAKVQ 698
>WB|WBGene00022056 [details] [associations]
symbol:Y67D2.6 species:6239 "Caenorhabditis elegans"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 HOGENOM:HOG000175261
GeneTree:ENSGT00700000104241 EMBL:FO081642 RefSeq:NP_497420.1
ProteinModelPortal:Q9BKQ8 SMR:Q9BKQ8 MINT:MINT-1068531
STRING:Q9BKQ8 PaxDb:Q9BKQ8 EnsemblMetazoa:Y67D2.6 GeneID:175308
KEGG:cel:CELE_Y67D2.6 UCSC:Y67D2.6 CTD:175308 WormBase:Y67D2.6
InParanoid:Q9BKQ8 KO:K13117 OMA:NIFVVPP NextBio:887600
Uniprot:Q9BKQ8
Length = 732
Score = 346 (126.9 bits), Expect = 9.4e-29, P = 9.4e-29
Identities = 81/227 (35%), Positives = 133/227 (58%)
Query: 3 SLVVTPIS-QMAEFPLEPNLSKMLIMSVHLQCSDEVLTIVSMLSVQNVFYRPXXXXXXXX 61
S + +P+ QMAEFPL P SK L+ S CS E++TIV+M+ +Q+VF P
Sbjct: 492 SQLTSPLGLQMAEFPLPPMHSKCLLKSAEFGCSTEMVTIVAMMQIQDVFITPYRQRHQAD 551
Query: 62 XXXXXFNQMEGDHITLLAVYNSWRNNKFSNAWCYENFVQIRTLKRAQDVRKQLLGIMDRH 121
F EGDH+T+L V+ + N S WC ++FV R L RA +VR QL+ ++ R
Sbjct: 552 VIRKKFAVEEGDHMTMLNVFTKFVENGRSKKWCSDHFVNYRGLMRADNVRSQLVRLLKRF 611
Query: 122 KLDVVSA-GK-N-TVRVQKAVCSGFFRNAAKKDPQEGYRTLVDSQVVYIHP-SSALFNRQ 177
+++ VS+ G N + +++ + +GFF AA+ Y T+ +S ++ SS +F +
Sbjct: 612 EIEKVSSRGLINCSENIRQCLVTGFFSQAAQYHYTGKYMTVKESFPFNMYKGSSIMFKKD 671
Query: 178 -PEWVIYHELVQTTKEYMREVTSIDPKWLVEFAPAFFKFSDPTKLSK 223
P+WVI+ E++Q + +R+VT I+P+WL E AP +++F +L++
Sbjct: 672 YPKWVIFTEVMQDS---IRDVTVIEPEWLYELAPHYYEFGTEGELAE 715
Score = 179 (68.1 bits), Expect = 1.2e-23, Sum P(2) = 1.2e-23
Identities = 49/127 (38%), Positives = 73/127 (57%)
Query: 216 SDPTKLSKFKKNQRLEPLQRTNRISFPPGLLKQAVKKRPEIKLIVTSATLDAVKFSSYFF 275
+DP LSK+ E +R+ GLL++ ++ R ++++IV+SATLDA F FF
Sbjct: 185 ADPL-LSKYSIIMIDEAHERSCNTDILLGLLRKIIQIRNDLRIIVSSATLDAELFKD-FF 242
Query: 276 E-----------APIFTIPGRTFPVEVLYTKEPETDYLDASLITVMQIHLREPPGDVLLF 324
E A I ++ GRT PV V +TK DY +++ TV+ IH E PGD+L+F
Sbjct: 243 EMNETGNSDKDTAGIISVEGRTHPVAVHHTKTSVPDYCQSAVDTVINIHKHENPGDILVF 302
Query: 325 LTGKLDV 331
LTG+ +V
Sbjct: 303 LTGQDEV 309
Score = 176 (67.0 bits), Expect = 1.2e-23, Sum P(2) = 1.2e-23
Identities = 38/96 (39%), Positives = 60/96 (62%)
Query: 456 NKYEEPN---AWRISREEIDTACEILYERMKSLGPDVPELIILPVYSALPSEMQTRIFEA 512
+K+E P + ++E++ CE L E +L + L ++P Y ALP+ Q + F++
Sbjct: 291 HKHENPGDILVFLTGQDEVEDVCEKLRELAGNL-KNCDRLWVVPCYGALPAREQMKAFDS 349
Query: 513 APPGSRKVVIATNIAETSLTIDGIFYVVDPFDIEVR 548
P G+RKVV+ATNIAE S+TI GI YV+D +++R
Sbjct: 350 TPHGTRKVVVATNIAEASITIPGICYVIDTGYVKLR 385
Score = 149 (57.5 bits), Expect = 8.1e-21, Sum P(2) = 8.1e-21
Identities = 38/120 (31%), Positives = 74/120 (61%)
Query: 330 DVRKQLLGIMDRHKLDVVSA-GK-N-TVRVQKAVCSGFFRNAAKKDPQEGYRTLVDSQVV 386
+VR QL+ ++ R +++ VS+ G N + +++ + +GFF AA+ Y T+ +S
Sbjct: 599 NVRSQLVRLLKRFEIEKVSSRGLINCSENIRQCLVTGFFSQAAQYHYTGKYMTVKESFPF 658
Query: 387 YIHP-SSALFNRQ-PEWVIYHELVQTTKEYMREVTSIDPKWLVEFAPAFFKFSDPTKLSK 444
++ SS +F + P+WVI+ E++Q + +R+VT I+P+WL E AP +++F +L++
Sbjct: 659 NMYKGSSIMFKKDYPKWVIFTEVMQDS---IRDVTVIEPEWLYELAPHYYEFGTEGELAE 715
>FB|FBgn0032194 [details] [associations]
symbol:CG4901 species:7227 "Drosophila melanogaster"
[GO:0004004 "ATP-dependent RNA helicase activity" evidence=ISS]
[GO:0000390 "spliceosomal complex disassembly" evidence=ISS]
[GO:0005681 "spliceosomal complex" evidence=ISS] [GO:0004386
"helicase activity" evidence=ISS] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0022008 "neurogenesis" evidence=IMP] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
EMBL:AE014134 GO:GO:0022008 GO:GO:0006200 GO:GO:0003676
GO:GO:0004386 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
GeneTree:ENSGT00700000104241 OMA:APDYFRR EMBL:AY113491
RefSeq:NP_609356.2 UniGene:Dm.10854 SMR:Q9VL25 MINT:MINT-898830
STRING:Q9VL25 EnsemblMetazoa:FBtr0079947 GeneID:34357
KEGG:dme:Dmel_CG4901 UCSC:CG4901-RA FlyBase:FBgn0032194
InParanoid:Q9VL25 OrthoDB:EOG4MW6N5 GenomeRNAi:34357 NextBio:788096
Uniprot:Q9VL25
Length = 694
Score = 333 (122.3 bits), Expect = 2.6e-27, P = 2.6e-27
Identities = 71/221 (32%), Positives = 124/221 (56%)
Query: 2 DSLVVTPIS-QMAEFPLEPNLSKMLIMSVHLQCSDEVLTIVSMLSVQNVFYRPXXXXXXX 60
D +TP+ QM ++PL+P SK+L+ + C +E+L++VS+LS +VF
Sbjct: 477 DDSYITPLGRQMVQYPLDPKYSKLLLTASSFGCMEEILSLVSVLSSDHVFVSNSEKNEMA 536
Query: 61 XXXXXXFNQMEGDHITLLAVYNSWRNNKFSNAWCYENFVQIRTLKRAQDVRKQLLGIMDR 120
F GDH+TLL V+N + ++ WC++N++ +R+L A++VR+QL I +
Sbjct: 537 ALAHAKFQSKHGDHLTLLNVFNGFLKSEKPKMWCHDNYLNLRSLTYARNVRRQLREISEH 596
Query: 121 HKLDVVSAGKNTVRVQKAVCSGFFRNAAKKDPQEGYRTLVDSQVVYIHPSSALFNR-QPE 179
L +++ + ++K + +GFF N A Y T + IHPSS L + +P
Sbjct: 597 LHL-ALNSSDDIEMLKKCILNGFFENIAVLQRDGFYITASGNIRSKIHPSSVLHGKYKPS 655
Query: 180 WVIYHELVQTTKEYMREVTSIDPKWLVEFAPAFFKFSDPTK 220
++++ E+VQT + ++R+VT I +W+ E P F K + PT+
Sbjct: 656 YILFTEIVQTEQTFLRQVTEISIEWIKEVVP-FVK-NIPTR 694
Score = 183 (69.5 bits), Expect = 1.2e-10, P = 1.2e-10
Identities = 47/132 (35%), Positives = 73/132 (55%)
Query: 231 EPLQRTNRISFPPGLLKQAVKKRPE-----IKLIVTSATLDAVKFSSYFFEAPIFTIPGR 285
E +RT G++K A K+R + +K++VTSAT+D F +YF ++ + GR
Sbjct: 189 EAHERTVNADLLFGIVKDAQKERRKQKLANLKVVVTSATMDIDHFGNYFNCKGMY-LEGR 247
Query: 286 TFPVEVLYTKEPETDYLDASLITVMQIHLREPPG-DVLLFLTGKLDVRKQLLGIMDRHKL 344
T+PV V++TKE DY+ L+T+ IH P DVL+FLTG+ ++ I K+
Sbjct: 248 TYPVRVMHTKEEHEDYIHTVLVTLFHIHRTTPKNHDVLIFLTGQEEIESLAQQIRQLAKI 307
Query: 345 DVVSAGKNTVRV 356
D + G +RV
Sbjct: 308 D--TTGTTDLRV 317
Score = 145 (56.1 bits), Expect = 1.6e-06, P = 1.6e-06
Identities = 38/118 (32%), Positives = 65/118 (55%)
Query: 325 LTGKLDVRKQLLGIMDRHKLDVVSAGKNTVRVQKAVCSGFFRNAAKKDPQEGYRTLVDSQ 384
LT +VR+QL I + L +++ + ++K + +GFF N A Y T +
Sbjct: 580 LTYARNVRRQLREISEHLHL-ALNSSDDIEMLKKCILNGFFENIAVLQRDGFYITASGNI 638
Query: 385 VVYIHPSSALFNR-QPEWVIYHELVQTTKEYMREVTSIDPKWLVEFAPAFFKFSDPTK 441
IHPSS L + +P ++++ E+VQT + ++R+VT I +W+ E P F K + PT+
Sbjct: 639 RSKIHPSSVLHGKYKPSYILFTEIVQTEQTFLRQVTEISIEWIKEVVP-FVK-NIPTR 694
>UNIPROTKB|G4MKC3 [details] [associations]
symbol:MGG_02518 "ATP-dependent RNA helicase DHX8"
species:242507 "Magnaporthe oryzae 70-15" [GO:0005575
"cellular_component" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0003676 EMBL:CM001231 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
KO:K13117 RefSeq:XP_003709326.1 EnsemblFungi:MGG_02518T0
GeneID:2681615 KEGG:mgr:MGG_02518 Uniprot:G4MKC3
Length = 671
Score = 294 (108.6 bits), Expect = 6.2e-23, P = 6.2e-23
Identities = 62/218 (28%), Positives = 123/218 (56%)
Query: 11 QMAEFPLEPNLSKMLIMSVHLQCSDEVLTIVSMLSVQ-NVFYRPXXXXXXXXXXXXXFNQ 69
+MAE ++P ++K L+ + C E+LTI +M S +V+ + F
Sbjct: 452 RMAELAVDPMMAKTLLSAESFGCLSEMLTIAAMTSAGGDVWIQHEGERKQFESRRRKFAA 511
Query: 70 MEGDHITLLAVYNSW-RNNKFSNAWCYENFVQIRTLKRAQDVRKQLLGIMDRHKLDV--- 125
EGDH+T L VY ++ + + +C+EN + +T+ RA +R QL ++R + V
Sbjct: 512 GEGDHLTFLNVYQAFVTKGRKESGFCHENLLNYKTMSRAVSIRAQLKRYLERFGIRVDET 571
Query: 126 VSAGKNT--------VRVQKAVCSGFFRNAAKKDPQEGYRTLVDSQVVYIHPSSALFNRQ 177
+++GK ++++ + +G+F +AA+ ++T+ ++ HPSS +FNR+
Sbjct: 572 LASGKTRGASPGVTGEQIRRCLTTGYFAHAARMQADGTFQTVQGGTTLHAHPSSLMFNRK 631
Query: 178 PEWVIYHELVQT-TKEYMREVTSIDPKWLVEFAPAFFK 214
+WVI+HE+++T K ++R+++ ++ WL+E+AP F++
Sbjct: 632 ADWVIFHEVMETGAKTFIRDISKVEKCWLLEYAPDFYQ 669
Score = 204 (76.9 bits), Expect = 7.5e-27, Sum P(2) = 7.5e-27
Identities = 49/141 (34%), Positives = 81/141 (57%)
Query: 217 DPTKLSKFKKNQRLEPLQRTNRISFPPGLLKQAVKKRPEIKLIVTSATLDAVKFSSYFF- 275
DP LS++ E +R+ GLLK+ KKRPE+++I++SATL A +F ++F
Sbjct: 130 DPL-LSRYSIVMVDEAHERSVSTDILLGLLKKIRKKRPELRIIISSATLQAEQFLAFFSS 188
Query: 276 ---------EAP------IFTIPGRTFPVEVLYTKEPETDYLDASLITVMQIHLREPPGD 320
E P I ++ GRT+P+++LY + P DYL ++ TV+ +H EP GD
Sbjct: 189 TLGGSRQDREEPQGTIGTIVSLEGRTYPIDILYLESPAEDYLQRAVSTVLDVHENEPDGD 248
Query: 321 VLLFLTGKLDVRKQLLGIMDR 341
+L+FLTG+ ++ + + +R
Sbjct: 249 ILVFLTGRDEIEAAVDAVSER 269
Score = 179 (68.1 bits), Expect = 7.5e-27, Sum P(2) = 7.5e-27
Identities = 28/89 (31%), Positives = 60/89 (67%)
Query: 348 SAGKNTVRVQKAVCSGFFRNAAKKDPQEGYRTLVDSQVVYIHPSSALFNRQPEWVIYHEL 407
S G ++++ + +G+F +AA+ ++T+ ++ HPSS +FNR+ +WVI+HE+
Sbjct: 581 SPGVTGEQIRRCLTTGYFAHAARMQADGTFQTVQGGTTLHAHPSSLMFNRKADWVIFHEV 640
Query: 408 VQT-TKEYMREVTSIDPKWLVEFAPAFFK 435
++T K ++R+++ ++ WL+E+AP F++
Sbjct: 641 METGAKTFIRDISKVEKCWLLEYAPDFYQ 669
Score = 169 (64.5 bits), Expect = 8.3e-26, Sum P(2) = 8.3e-26
Identities = 37/81 (45%), Positives = 52/81 (64%)
Query: 468 REEIDTACEILYERMKSLGPDVPELIILPVYSALPSEMQTRIFEAAPPGSRKVVIATNIA 527
R+EI+ A + + ER L L+ LP++S L +E Q IFE AP +RKV+ +TNIA
Sbjct: 256 RDEIEAAVDAVSERTAHLTSQDRGLLPLPLFSGLSTEQQMYIFEEAPANTRKVIFSTNIA 315
Query: 528 ETSLTIDGIFYVVDPFDIEVR 548
E S+TI GI YVVD +++R
Sbjct: 316 EASVTISGIVYVVDSGFVKLR 336
Score = 41 (19.5 bits), Expect = 1.0e-09, Sum P(2) = 1.0e-09
Identities = 12/34 (35%), Positives = 18/34 (52%)
Query: 281 TIPGRTFPVEVLYTKEPETDYLDASLITVMQIHL 314
T PG+ F LYT+E T D ++ V + +L
Sbjct: 367 TKPGKCFR---LYTEESYTSLSDTNIPEVQRSNL 397
>ASPGD|ASPL0000052850 [details] [associations]
symbol:AN1363 species:162425 "Emericella nidulans"
[GO:0008150 "biological_process" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408
PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
GO:GO:0005524 EMBL:BN001308 GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 HOGENOM:HOG000175261 KO:K13117
EMBL:AACD01000018 OrthoDB:EOG4BGD47 RefSeq:XP_658967.1
EnsemblFungi:CADANIAT00001248 GeneID:2877144 KEGG:ani:AN1363.2
OMA:VAEEMRC Uniprot:Q5BDL7
Length = 670
Score = 325 (119.5 bits), Expect = 1.9e-26, P = 1.9e-26
Identities = 68/216 (31%), Positives = 121/216 (56%)
Query: 11 QMAEFPLEPNLSKMLIMSVHLQCSDEVLTIVSMLSVQN-VFYRPXXXXXXXXXXXXXFNQ 69
+MAE ++P ++K+L+ + C E+LTI +M+S+Q V+ + F
Sbjct: 452 RMAELAVDPMMAKVLLSAQSFGCLSEILTIAAMVSLQGAVWVQHDGDKKSSESSRRKFAV 511
Query: 70 MEGDHITLLAVYNSW-RNNKFSNAWCYENFVQIRTLKRAQDVRKQLLGIMDRHKLDVVSA 128
EGDH+T L VY ++ K + WC +N + R+L RA VR QL ++R + V
Sbjct: 512 EEGDHLTYLNVYQAFVTKGKKESKWCRDNLLNYRSLLRAVSVRAQLKRYLERFGIQVDET 571
Query: 129 ----------GKNTVRVQKAVCSGFFRNAAKKDPQEGYRTLVDSQVVYIHPSSALFNRQP 178
K ++Q+ + +G+F +AA+ P ++T+ ++ HPSS +FNR+
Sbjct: 572 FPSHYNKSDLSKPAEKIQRCLTTGYFAHAARMQPDGTFKTVSGGMTLHAHPSSLMFNRKA 631
Query: 179 EWVIYHELVQT-TKEYMREVTSIDPKWLVEFAPAFF 213
+WVI+HE++QT K ++R++T I+ +L+E+AP ++
Sbjct: 632 DWVIFHEIMQTGEKTFIRDITKIEKSYLLEYAPNYY 667
Score = 193 (73.0 bits), Expect = 3.8e-26, Sum P(2) = 3.8e-26
Identities = 38/74 (51%), Positives = 54/74 (72%)
Query: 468 REEIDTACEILYERMKSLGPDVPELIILPVYSALPSEMQTRIFEAAPPGSRKVVIATNIA 527
REEI+TA +++ ER +L P L+ LP+Y+ L ++ Q +FE AP +RKVV++TNIA
Sbjct: 256 REEIETAIQLISERATTLHPKSQSLLPLPLYAGLTTDQQMYVFEPAPENTRKVVVSTNIA 315
Query: 528 ETSLTIDGIFYVVD 541
E S+TI+GI YVVD
Sbjct: 316 EASVTINGIVYVVD 329
Score = 190 (71.9 bits), Expect = 8.2e-26, Sum P(2) = 8.2e-26
Identities = 30/85 (35%), Positives = 59/85 (69%)
Query: 351 KNTVRVQKAVCSGFFRNAAKKDPQEGYRTLVDSQVVYIHPSSALFNRQPEWVIYHELVQT 410
K ++Q+ + +G+F +AA+ P ++T+ ++ HPSS +FNR+ +WVI+HE++QT
Sbjct: 583 KPAEKIQRCLTTGYFAHAARMQPDGTFKTVSGGMTLHAHPSSLMFNRKADWVIFHEIMQT 642
Query: 411 -TKEYMREVTSIDPKWLVEFAPAFF 434
K ++R++T I+ +L+E+AP ++
Sbjct: 643 GEKTFIRDITKIEKSYLLEYAPNYY 667
Score = 184 (69.8 bits), Expect = 3.8e-26, Sum P(2) = 3.8e-26
Identities = 48/140 (34%), Positives = 78/140 (55%)
Query: 217 DPTKLSKFKKNQRLEPLQRTNRISFPPGLLKQAVKKRPEIKLIVTSATLDAVKFSSYFF- 275
DP LS++ E +R+ G+LK+ +K+RPE+++IV+SATL A F YF
Sbjct: 131 DPL-LSRYSVIMVDEAHERSLSTDILLGILKKILKRRPELRIIVSSATLQAEDFLRYFAG 189
Query: 276 ----EAP----------IFTIPGRTFPVEVLYTKEPETDYLDASLITVMQIHLREPPGDV 321
+ P I +I GR +PV+ L+ + +Y++ S+ TV IHL+E GD+
Sbjct: 190 DESQQGPNGEVGGNTGKIISIEGRMYPVDTLFLESAAENYVERSVKTVFDIHLQEGEGDI 249
Query: 322 LLFLTGKLDVRKQLLGIMDR 341
L+FLTG+ ++ + I +R
Sbjct: 250 LIFLTGREEIETAIQLISER 269
>FB|FBgn0031631 [details] [associations]
symbol:CG3225 species:7227 "Drosophila melanogaster"
[GO:0004004 "ATP-dependent RNA helicase activity" evidence=ISS]
[GO:0000398 "mRNA splicing, via spliceosome" evidence=IC;ISS]
[GO:0005681 "spliceosomal complex" evidence=ISS] [GO:0003724 "RNA
helicase activity" evidence=ISS] [GO:0004386 "helicase activity"
evidence=ISS] [GO:0005524 "ATP binding" evidence=IEA] [GO:0003676
"nucleic acid binding" evidence=IEA] [GO:0071011 "precatalytic
spliceosome" evidence=IDA] [GO:0071013 "catalytic step 2
spliceosome" evidence=IDA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 GO:GO:0005524 EMBL:AE014134 GO:GO:0006200
GO:GO:0003676 GO:GO:0004386 GO:GO:0071011 GO:GO:0000398
GO:GO:0071013 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
GO:GO:0016779 GeneTree:ENSGT00700000104241 KO:K13117 OMA:NIFVVPP
EMBL:AY069418 RefSeq:NP_608860.1 UniGene:Dm.300 SMR:Q9VR29
DIP:DIP-18193N IntAct:Q9VR29 MINT:MINT-288733
EnsemblMetazoa:FBtr0077416 GeneID:33680 KEGG:dme:Dmel_CG3225
UCSC:CG3225-RA FlyBase:FBgn0031631 InParanoid:Q9VR29
OrthoDB:EOG4H189P GenomeRNAi:33680 NextBio:784751 Uniprot:Q9VR29
Length = 678
Score = 315 (115.9 bits), Expect = 2.7e-25, P = 2.7e-25
Identities = 69/207 (33%), Positives = 112/207 (54%)
Query: 12 MAEFPLEPNLSKMLIMSVHLQCSDEVLTIVSMLSVQNVFYRPXXXXXXXXXXXXX--FNQ 69
+AE P LSKML +S + CS+E++TI+++L VQ++F RP F
Sbjct: 466 LAELPFSAMLSKMLYVSGQMGCSEEIITIIALLQVQSIFSRPASAVAQQSGRIAHRKFEV 525
Query: 70 MEGDHITLLAVYNSWRNNKFSNAWCYENFVQIRTLKRAQDVRKQLLGIM-DRHKLDVVSA 128
EGD IT+L Y + + +C + F+ R LKRA +R+QL+ + ++ + + S
Sbjct: 526 AEGDFITMLNAYTGFVEEGMTKEFCGQYFLIYRNLKRAHSLREQLITVARKKYGIPIFSC 585
Query: 129 GKNTVRVQKAVCSGFFRNAAKKDPQEGYRTLVDSQVVYIHPSSALFNR-QPEWVIYHELV 187
+ ++ K + +GFF A YR + + IHP+S L+ Q ++V+Y EL+
Sbjct: 586 KGDVEKLCKCITAGFFTQVAYLHHSGVYRQISSGTELAIHPNSTLYTLPQAQYVVYGELL 645
Query: 188 QTTKEYMREVTSIDPKWLVEFAPAFFK 214
QTTK +M VT I +WL E AP +++
Sbjct: 646 QTTKLFMNYVTVIKREWLTELAPHYYQ 672
Score = 197 (74.4 bits), Expect = 7.3e-24, Sum P(2) = 7.3e-24
Identities = 43/98 (43%), Positives = 63/98 (64%)
Query: 244 GLLKQAVKKRPEIKLIVTSATLDAVKFSSYFF-----EAPI-FTIPGRTFPVEVLYTKEP 297
GLLK+ ++KR +KLI++SAT+DA FS +F E + +I GR PV Y EP
Sbjct: 181 GLLKKILRKRSSLKLIISSATIDASFFSEFFSWPGSGEVSVKLSIEGRMHPVSNFYLNEP 240
Query: 298 ETDYLDASLITVMQIHLREPPGDVLLFLTGKLDVRKQL 335
DY+ ++ TV ++H +EPPGD+L FLTG+ +V + L
Sbjct: 241 CADYVKETVETVWKLHQKEPPGDILAFLTGQEEVLEAL 278
Score = 158 (60.7 bits), Expect = 7.3e-24, Sum P(2) = 7.3e-24
Identities = 37/94 (39%), Positives = 57/94 (60%)
Query: 463 AWRISREEIDTACEILYERMKSLGPDVPELIILPVYSALPSEMQTRIFEAAPPGSRKVVI 522
A+ +EE+ A ++L E + S + L +LP+Y ++ S Q +F P G+RKVV+
Sbjct: 266 AFLTGQEEVLEALDLLREYIAS--SEQENLKVLPMYGSMSSTDQLSVFFTPPKGTRKVVL 323
Query: 523 ATNIAETSLTIDGIFYVVDPFDIEVRQAKYHRCA 556
ATNIAETS+TI GI YV+D ++V+ C+
Sbjct: 324 ATNIAETSITIPGIVYVIDCGYVKVKWYNPKTCS 357
Score = 154 (59.3 bits), Expect = 1.9e-23, Sum P(2) = 1.9e-23
Identities = 34/107 (31%), Positives = 60/107 (56%)
Query: 331 VRKQLLGIM-DRHKLDVVSAGKNTVRVQKAVCSGFFRNAAKKDPQEGYRTLVDSQVVYIH 389
+R+QL+ + ++ + + S + ++ K + +GFF A YR + + IH
Sbjct: 566 LREQLITVARKKYGIPIFSCKGDVEKLCKCITAGFFTQVAYLHHSGVYRQISSGTELAIH 625
Query: 390 PSSALFNR-QPEWVIYHELVQTTKEYMREVTSIDPKWLVEFAPAFFK 435
P+S L+ Q ++V+Y EL+QTTK +M VT I +WL E AP +++
Sbjct: 626 PNSTLYTLPQAQYVVYGELLQTTKLFMNYVTVIKREWLTELAPHYYQ 672
>UNIPROTKB|F1NWM3 [details] [associations]
symbol:DHX40 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
GeneTree:ENSGT00700000104421 OMA:LYGSMPT EMBL:AADN02025787
IPI:IPI00583149 Ensembl:ENSGALT00000008234 Uniprot:F1NWM3
Length = 730
Score = 310 (114.2 bits), Expect = 1.2e-24, P = 1.2e-24
Identities = 83/269 (30%), Positives = 135/269 (50%)
Query: 6 VTPISQ-MAEFPLEPNLSKMLIMSVHLQCSDEVLTIVSMLSVQNVFYRPXX---XXXXXX 61
VT + + + +FPL PNLS +I + L C D +L I +MLSV+NVF RP
Sbjct: 430 VTRLGEFLVQFPLPPNLSCAVIKAASLDCEDMLLPIAAMLSVENVFIRPGDPQKQKEAEL 489
Query: 62 XXXXXFNQMEG--DHITLLAVYNSWRNNKFSNAWCYENFVQIRTLKRAQDVRKQLLGIMD 119
+Q+ G D TLL ++ + +K +AWC++ ++ R +K A V KQL I
Sbjct: 490 QHQELSSQVGGCNDFATLLNIFEQCKASKSPSAWCHKYWIHWRAVKSALSVEKQLREITS 549
Query: 120 RHKL--DVVSA---GKNTVRVQKAVCSGFFRNAAKKDPQEGYRTLVD-SQVVYIHPSSAL 173
+ K D G T +++ +C+G+F N A++ + T+ +VYIHPSS L
Sbjct: 550 KLKQLPDFPKETFEGSRTELLRRCLCAGYFINVARRSAARTFCTMDGHGSIVYIHPSSTL 609
Query: 174 FNRQP--EWVIYHELVQTTKEYMREVTSIDPKWLVEFAPAFFKFSDPTKLSKFKKNQRLE 231
+N++ EW+I+H++ T+K Y+R V + +W+ + P + D +LS + + E
Sbjct: 610 YNQETRLEWIIFHDVTVTSKIYVRTVCPVRYEWVKDLLPRLHQI-DAYELSSVAREEVTE 668
Query: 232 PLQRTNRISFPPGLLKQ--AVKKRPEIKL 258
+ R L +Q K P KL
Sbjct: 669 --EEITRWKHKEDLRRQYEGAKDNPAKKL 695
Score = 168 (64.2 bits), Expect = 4.6e-21, Sum P(2) = 4.6e-21
Identities = 35/79 (44%), Positives = 54/79 (68%)
Query: 470 EIDTACEILYERMKSLG-------PDVPELIILPVYSALPSEMQTRIFEAAPPGSRKVVI 522
EI+ AC++L+++ +S+ + L+ILP+Y ++ ++ Q RIF AP G RK V+
Sbjct: 233 EIEKACDLLFKKAESIDYRYEVHDRSIEGLLILPLYGSMSTDQQKRIFLPAPKGIRKCVV 292
Query: 523 ATNIAETSLTIDGIFYVVD 541
+TNIA TSLTI+G+ YVVD
Sbjct: 293 STNIAATSLTIEGVRYVVD 311
Score = 164 (62.8 bits), Expect = 1.3e-20, Sum P(2) = 1.3e-20
Identities = 44/151 (29%), Positives = 77/151 (50%)
Query: 329 LDVRKQLLGIMDRHKL--DVVSA---GKNTVRVQKAVCSGFFRNAAKKDPQEGYRTLVD- 382
L V KQL I + K D G T +++ +C+G+F N A++ + T+
Sbjct: 538 LSVEKQLREITSKLKQLPDFPKETFEGSRTELLRRCLCAGYFINVARRSAARTFCTMDGH 597
Query: 383 SQVVYIHPSSALFNRQP--EWVIYHELVQTTKEYMREVTSIDPKWLVEFAPAFFKFSDPT 440
+VYIHPSS L+N++ EW+I+H++ T+K Y+R V + +W+ + P + D
Sbjct: 598 GSIVYIHPSSTLYNQETRLEWIIFHDVTVTSKIYVRTVCPVRYEWVKDLLPRLHQI-DAY 656
Query: 441 KLSKFKKNQRLEPLYNKYEEPNAWRISREEI 471
+LS + + E EE W+ +E++
Sbjct: 657 ELSSVAREEVTE------EEITRWK-HKEDL 680
Score = 163 (62.4 bits), Expect = 4.6e-21, Sum P(2) = 4.6e-21
Identities = 43/130 (33%), Positives = 73/130 (56%)
Query: 216 SDPTKLSKFKKNQRLEPLQRTNRISFPPGLLKQA-VKKRP-----EIKLIVTSATLDAVK 269
+DP LSK+ E +R+ GLLK+ ++ +P E+K++V SATL+ K
Sbjct: 108 ADPL-LSKYSIIILDEAHERSLSTDILFGLLKKLFLQNKPPGRKTEMKVVVMSATLEVDK 166
Query: 270 FSSYFFEAPIFTIPGRTFPVEVLYTK--EPE----TDYLDASLITVMQIHLREPPGDVLL 323
S +F + IPGR++PV+ ++ P + Y+ ++ + IHL EP GD+L+
Sbjct: 167 LSEFFGHCSVLHIPGRSYPVKEIFCNLLSPRDTGSSAYVTEAVKVTLDIHLNEPEGDILV 226
Query: 324 FLTGKLDVRK 333
FLTG++++ K
Sbjct: 227 FLTGQIEIEK 236
Score = 45 (20.9 bits), Expect = 8.1e-09, Sum P(2) = 8.1e-09
Identities = 20/61 (32%), Positives = 30/61 (49%)
Query: 305 SLITVMQIHLREPPGDVLLFLTGKLDVRKQLLGIMDRHKLDVVSAGKNTVRVQKAVCSGF 364
S+I + + H R D+L L KL ++ + G K+ V+SA T+ V K S F
Sbjct: 116 SIIILDEAHERSLSTDILFGLLKKLFLQNKPPGRKTEMKVVVMSA---TLEVDKL--SEF 170
Query: 365 F 365
F
Sbjct: 171 F 171
Score = 39 (18.8 bits), Expect = 1.2e-07, Sum P(2) = 1.2e-07
Identities = 8/26 (30%), Positives = 15/26 (57%)
Query: 467 SREEIDTACEILYERMKSLGPDVPEL 492
S+ + T C + YE +K L P + ++
Sbjct: 628 SKIYVRTVCPVRYEWVKDLLPRLHQI 653
>UNIPROTKB|Q7L7V1 [details] [associations]
symbol:DHX32 "Putative pre-mRNA-splicing factor
ATP-dependent RNA helicase DHX32" species:9606 "Homo sapiens"
[GO:0004386 "helicase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0005739 "mitochondrion" evidence=IEA] InterPro:IPR007502
Pfam:PF04408 PROSITE:PS51194 SMART:SM00847 GO:GO:0005739
GO:GO:0005524 GO:GO:0005634 EMBL:CH471066 GO:GO:0004386
InterPro:IPR014001 PROSITE:PS51192 EMBL:AY064247 EMBL:AL360176
UniGene:Hs.370292 eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
HOVERGEN:HBG039428 EMBL:AF427340 EMBL:AF427341 EMBL:AY064250
EMBL:AK001556 EMBL:AK001751 EMBL:AK024869 EMBL:BC002473
EMBL:BC037925 EMBL:BC068471 EMBL:AL162051 IPI:IPI00334601
IPI:IPI00644447 PIR:T47184 RefSeq:NP_060650.2
ProteinModelPortal:Q7L7V1 SMR:Q7L7V1 IntAct:Q7L7V1 STRING:Q7L7V1
PhosphoSite:Q7L7V1 DMDM:74759011 PRIDE:Q7L7V1 DNASU:55760
Ensembl:ENST00000284688 Ensembl:ENST00000284690
Ensembl:ENST00000368721 Ensembl:ENST00000415732 GeneID:55760
KEGG:hsa:55760 UCSC:uc001lje.1 UCSC:uc001ljf.1 CTD:55760
GeneCards:GC10M127515 HGNC:HGNC:16717 HPA:HPA048872 MIM:607960
neXtProt:NX_Q7L7V1 PharmGKB:PA27219 InParanoid:Q7L7V1 OMA:LACEQDI
OrthoDB:EOG4N30NF PhylomeDB:Q7L7V1 ChiTaRS:DHX32 GenomeRNAi:55760
NextBio:60779 Bgee:Q7L7V1 Genevestigator:Q7L7V1 Uniprot:Q7L7V1
Length = 743
Score = 310 (114.2 bits), Expect = 1.2e-24, P = 1.2e-24
Identities = 71/228 (31%), Positives = 119/228 (52%)
Query: 12 MAEFPLEPNLSKMLIMSVHLQCSDEVLTIVSMLSVQNVF-YRPXXXXXXXXXXXXXFNQM 70
M+EFPL+P LSK ++ S C DEVLTI +M++ N F + P F
Sbjct: 481 MSEFPLDPQLSKSILASCEFDCVDEVLTIAAMVTAPNCFSHVPHGAEEAALTCWKTFLHP 540
Query: 71 EGDHITLLAVYNSWRNNKFSNA-------WCYENFVQIRTLKRAQDVRKQLLGIMDRHKL 123
EGDH TL+++Y ++++ +++ WC + F+ L+ A +R +LL I+ R +L
Sbjct: 541 EGDHFTLISIYKAYQDTTLNSSSEYCVEKWCRDYFLNCSALRMADVIRAELLEIIKRIEL 600
Query: 124 DVVSAG----KNTVRVQKAVCSGFFRNAAKK-DPQEGYRTLVDSQVVYIHPSS--ALFNR 176
+NT+ ++KA+ SG+F A+ D Y L QV +HP S ++ +
Sbjct: 601 PYAEPAFGSKENTLNIKKALLSGYFMQIARDVDGSGNYLMLTHKQVAQLHPLSGYSITKK 660
Query: 177 QPEWVIYHELVQTTKEYMREVTSIDPKWLVEFAPAFFKFSD-PTKLSK 223
PEWV++H+ + Y+R + I P+ ++ P ++ FS+ P SK
Sbjct: 661 MPEWVLFHKFSISENNYIRITSEISPELFMQLVPQYY-FSNLPPSESK 707
Score = 152 (58.6 bits), Expect = 7.9e-18, Sum P(2) = 7.9e-18
Identities = 37/122 (30%), Positives = 64/122 (52%)
Query: 331 VRKQLLGIMDRHKLDVVSAG----KNTVRVQKAVCSGFFRNAAKK-DPQEGYRTLVDSQV 385
+R +LL I+ R +L +NT+ ++KA+ SG+F A+ D Y L QV
Sbjct: 587 IRAELLEIIKRIELPYAEPAFGSKENTLNIKKALLSGYFMQIARDVDGSGNYLMLTHKQV 646
Query: 386 VYIHPSS--ALFNRQPEWVIYHELVQTTKEYMREVTSIDPKWLVEFAPAFFKFSD-PTKL 442
+HP S ++ + PEWV++H+ + Y+R + I P+ ++ P ++ FS+ P
Sbjct: 647 AQLHPLSGYSITKKMPEWVLFHKFSISENNYIRITSEISPELFMQLVPQYY-FSNLPPSE 705
Query: 443 SK 444
SK
Sbjct: 706 SK 707
Score = 149 (57.5 bits), Expect = 7.9e-18, Sum P(2) = 7.9e-18
Identities = 31/90 (34%), Positives = 51/90 (56%)
Query: 244 GLLKQAVKKRPEIKLIVTSATLDAVKFSSYFFEAPIFTIPGRTFPVEVLYTKEPETDYLD 303
GLLK + RPE+KLI+ S+ K +SY+ P+ + + PVEV+Y E + D +
Sbjct: 199 GLLKDVLLARPELKLIINSSPHLISKLNSYYGNVPVIEVKNK-HPVEVVYLSEAQKDSFE 257
Query: 304 ASLITVMQIHLREPPGDVLLFLTGKLDVRK 333
+ L + +IH GD+++FL + D+ K
Sbjct: 258 SILRLIFEIHHSGEKGDIVVFLACEQDIEK 287
Score = 80 (33.2 bits), Expect = 2.4e-10, Sum P(2) = 2.4e-10
Identities = 19/76 (25%), Positives = 40/76 (52%)
Query: 469 EEIDTACEILYERMKSLGPDVPELIILPVYSALPSEMQTRIFEA---APPGSRKVVIATN 525
++I+ CE +Y+ +L PD+ EL+++P+Y + + E R+VV+ T+
Sbjct: 283 QDIEKVCETVYQG-SNLNPDLGELVVVPLYPKEKCSLFKPLDETEKRCQVYQRRVVLTTS 341
Query: 526 IAETSLTIDGIFYVVD 541
E + + + +V+D
Sbjct: 342 SGEFLIWSNSVRFVID 357
>CGD|CAL0002969 [details] [associations]
symbol:orf19.107 species:5476 "Candida albicans" [GO:0005730
"nucleolus" evidence=IEA] [GO:0003724 "RNA helicase activity"
evidence=IEA] [GO:0000462 "maturation of SSU-rRNA from tricistronic
rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)" evidence=IEA]
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408
PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
CGD:CAL0002969 GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 KO:K14781 EMBL:AACQ01000106 RefSeq:XP_714316.1
GeneID:3644014 KEGG:cal:CaO19.107 Uniprot:Q59XP9
Length = 831
Score = 188 (71.2 bits), Expect = 2.3e-24, Sum P(2) = 2.3e-24
Identities = 43/115 (37%), Positives = 66/115 (57%)
Query: 219 TKLSKFKKNQRLEPLQRTNRISFPPGLLKQAVK--KRPEIKLIVTSATLDAVKFSSYFFE 276
+ L+K+ E +RT G LKQ + KR ++K++V SATL+A FS++F
Sbjct: 288 SNLTKYSTIILDEAHERTILTDLIMGFLKQIITSGKRKDLKIVVMSATLNAELFSNFFGN 347
Query: 277 APIFTIPGRTFPVEVLYTKEPETDYLDASLITVMQIHLREPPGDVLLFLTGKLDV 331
API I G+ +PV Y D +D + +++QI+L EP GDVL FL G+ ++
Sbjct: 348 APILYIEGKMYPVSQFYLDAESEDIVDTMIRSIIQINLNEPEGDVLCFLPGQEEI 402
Score = 175 (66.7 bits), Expect = 2.3e-24, Sum P(2) = 2.3e-24
Identities = 34/74 (45%), Positives = 50/74 (67%)
Query: 468 REEIDTACEILYERMKSLGPDVPELIILPVYSALPSEMQTRIFEAAPPGSRKVVIATNIA 527
+EEID + L + L + P ++ LP+Y+AL Q++IFE P G RKV++ATNIA
Sbjct: 399 QEEIDNCVKSLEQLAPQLPREAPLIVPLPLYAALSPGQQSKIFEKLPKGRRKVILATNIA 458
Query: 528 ETSLTIDGIFYVVD 541
ETS+T+ G+ YV+D
Sbjct: 459 ETSITVSGVKYVID 472
Score = 142 (55.0 bits), Expect = 6.4e-21, Sum P(2) = 6.4e-21
Identities = 36/102 (35%), Positives = 53/102 (51%)
Query: 333 KQLLGIMDRHKLDVVSAGK--NTVRVQKAVCSGFFRNAAKKDPQEGYRTLVDSQVVYIHP 390
KQL + R +LD K + + K+ G+ N A P +RT Q++ +HP
Sbjct: 720 KQLAKL--RAQLDNEETDKQLDVPSILKSFLKGYITNTAVGMPDRSFRTFNTGQLISVHP 777
Query: 391 SSALFNR-QPEWVIYHELVQTTKEYMREVTSIDPKWLVEFAP 431
SS LF + + ++Y E V TTK Y R V++I+ WL E AP
Sbjct: 778 SSTLFGKPNMDAIMYIEYVFTTKGYARNVSAIELSWLQEIAP 819
Score = 142 (55.0 bits), Expect = 1.5e-09, Sum P(2) = 1.5e-09
Identities = 36/102 (35%), Positives = 53/102 (51%)
Query: 112 KQLLGIMDRHKLDVVSAGK--NTVRVQKAVCSGFFRNAAKKDPQEGYRTLVDSQVVYIHP 169
KQL + R +LD K + + K+ G+ N A P +RT Q++ +HP
Sbjct: 720 KQLAKL--RAQLDNEETDKQLDVPSILKSFLKGYITNTAVGMPDRSFRTFNTGQLISVHP 777
Query: 170 SSALFNR-QPEWVIYHELVQTTKEYMREVTSIDPKWLVEFAP 210
SS LF + + ++Y E V TTK Y R V++I+ WL E AP
Sbjct: 778 SSTLFGKPNMDAIMYIEYVFTTKGYARNVSAIELSWLQEIAP 819
Score = 81 (33.6 bits), Expect = 1.5e-09, Sum P(2) = 1.5e-09
Identities = 36/136 (26%), Positives = 57/136 (41%)
Query: 2 DSLVVTPIS-QMAEFPLEPNLSKMLIMSVHLQCSDEVLTIVSMLSVQNVFYRPXXXXXXX 60
DS VT + +M+ PL P LS +LI + V+ I S LSV N+
Sbjct: 584 DSGKVTTLGYKMSILPLPPQLSVVLITAAEFGVLSPVIDIASCLSVDNLITNVTGEARDE 643
Query: 61 XXXXXXFNQMEGD-HITLLAVYNSWRNNKFSNA-WCYENFVQIRTLKRAQDVRKQLLG-I 117
+ G+ H L+A+Y ++ + WC E + K + ++ QL +
Sbjct: 644 INFKRRQHCPLGNIHGDLIALYEYFQAYQAQGKEWCKELAFSFKGFKNVEKIKYQLQEYM 703
Query: 118 MDRHKLD--VVSAGKN 131
M K D + +A KN
Sbjct: 704 MTTIKQDDSLTNAEKN 719
>MGI|MGI:2141813 [details] [associations]
symbol:Dhx32 "DEAH (Asp-Glu-Ala-His) box polypeptide 32"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003674 "molecular_function" evidence=ND]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005575 "cellular_component"
evidence=ND] [GO:0005634 "nucleus" evidence=IEA] [GO:0005739
"mitochondrion" evidence=IEA] [GO:0008150 "biological_process"
evidence=ND] [GO:0016787 "hydrolase activity" evidence=IEA]
InterPro:IPR007502 Pfam:PF04408 PROSITE:PS51194 SMART:SM00847
MGI:MGI:2141813 GO:GO:0005739 GO:GO:0005524 GO:GO:0005634
GO:GO:0004386 PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709
Pfam:PF07717 HOGENOM:HOG000175261 GeneTree:ENSGT00650000093246
HOVERGEN:HBG039428 CTD:55760 OMA:LACEQDI OrthoDB:EOG4N30NF
ChiTaRS:DHX32 EMBL:AY065980 EMBL:AK033624 EMBL:AK169005
EMBL:AK172504 EMBL:BC006911 EMBL:BC022920 IPI:IPI00127679
IPI:IPI00830523 RefSeq:NP_598702.1 UniGene:Mm.199223
ProteinModelPortal:Q8BZS9 SMR:Q8BZS9 PaxDb:Q8BZS9 PRIDE:Q8BZS9
Ensembl:ENSMUST00000033290 Ensembl:ENSMUST00000063669 GeneID:101437
KEGG:mmu:101437 UCSC:uc009kdj.1 InParanoid:Q8BZS9 NextBio:354922
Bgee:Q8BZS9 CleanEx:MM_DHX32 Genevestigator:Q8BZS9 Uniprot:Q8BZS9
Length = 744
Score = 306 (112.8 bits), Expect = 3.5e-24, P = 3.5e-24
Identities = 70/228 (30%), Positives = 119/228 (52%)
Query: 12 MAEFPLEPNLSKMLIMSVHLQCSDEVLTIVSMLSVQNVFYR-PXXXXXXXXXXXXXFNQM 70
M+EFPL+P LSK ++ S C DE+LTI +M++ + F P F
Sbjct: 482 MSEFPLDPQLSKSILASCEFDCVDEMLTIAAMVTAPSCFLHVPHGAEEAAVTCWKTFLHP 541
Query: 71 EGDHITLLAVYNSWRNNKFSNA-------WCYENFVQIRTLKRAQDVRKQLLGIMDRHKL 123
EGDH TL+ VYN++++ ++A WC++ F+ L+ A +R +LL I+ R +L
Sbjct: 542 EGDHFTLINVYNAYQDTVLNSANEHCVEMWCHDCFLSCSALRMADVIRAELLEIIKRIEL 601
Query: 124 DVVSAG----KNTVRVQKAVCSGFFRNAAKK-DPQEGYRTLVDSQVVYIHPSSA--LFNR 176
+N + ++KA+ SG+F A+ D Y L QV +HP S+ + +
Sbjct: 602 PYAEPAFGSKENGLNIKKALLSGYFMQIARDVDGSGNYLMLTHKQVAQLHPLSSYSITKK 661
Query: 177 QPEWVIYHELVQTTKEYMREVTSIDPKWLVEFAPAFFKFSD-PTKLSK 223
PEWV++H+ + Y+R +++ P+ ++ P ++ FS+ P SK
Sbjct: 662 MPEWVLFHQFSISENNYIRVASAVSPELFMQLVPQYY-FSNLPPSESK 708
Score = 150 (57.9 bits), Expect = 2.1e-17, Sum P(2) = 2.1e-17
Identities = 32/90 (35%), Positives = 51/90 (56%)
Query: 244 GLLKQAVKKRPEIKLIVTSATLDAVKFSSYFFEAPIFTIPGRTFPVEVLYTKEPETDYLD 303
GLLK + RPE+KLIV + L K SSY+ + P+ + + PVEV+Y + D +
Sbjct: 199 GLLKDVLLARPELKLIVNCSPLLTSKLSSYYGDVPVIEVRNK-HPVEVVYLSGAQKDSFE 257
Query: 304 ASLITVMQIHLREPPGDVLLFLTGKLDVRK 333
+ + + +IH GDV++FL + D+ K
Sbjct: 258 SVIRLIFEIHRSGEKGDVVVFLACEQDIEK 287
Score = 147 (56.8 bits), Expect = 2.1e-17, Sum P(2) = 2.1e-17
Identities = 35/122 (28%), Positives = 64/122 (52%)
Query: 331 VRKQLLGIMDRHKLDVVSAG----KNTVRVQKAVCSGFFRNAAKK-DPQEGYRTLVDSQV 385
+R +LL I+ R +L +N + ++KA+ SG+F A+ D Y L QV
Sbjct: 588 IRAELLEIIKRIELPYAEPAFGSKENGLNIKKALLSGYFMQIARDVDGSGNYLMLTHKQV 647
Query: 386 VYIHPSSA--LFNRQPEWVIYHELVQTTKEYMREVTSIDPKWLVEFAPAFFKFSD-PTKL 442
+HP S+ + + PEWV++H+ + Y+R +++ P+ ++ P ++ FS+ P
Sbjct: 648 AQLHPLSSYSITKKMPEWVLFHQFSISENNYIRVASAVSPELFMQLVPQYY-FSNLPPSE 706
Query: 443 SK 444
SK
Sbjct: 707 SK 708
Score = 76 (31.8 bits), Expect = 4.9e-10, Sum P(2) = 4.9e-10
Identities = 20/84 (23%), Positives = 43/84 (51%)
Query: 469 EEIDTACEILYERMKSLGPDVPELIILPVYSALPSEMQTRIFEA---APPGSRKVVIATN 525
++I+ E++ + +L PDV +L+++P+Y + + E R+VV+ T+
Sbjct: 283 QDIEKTYELVCQEGSNLNPDVGDLVVIPLYPKEKCSLFRPVDETEKRCQVYQRRVVLTTS 342
Query: 526 IAETSLTIDGIFYVVDPFDIEVRQ 549
E+ + + +V+D +E RQ
Sbjct: 343 CGESLIWSHTVKFVID-VGLERRQ 365
Score = 41 (19.5 bits), Expect = 4.1e-06, Sum P(2) = 4.1e-06
Identities = 10/28 (35%), Positives = 18/28 (64%)
Query: 97 NFVQIRTLKRAQ-DVRKQLLGIMDRHKL 123
N + ++ + ++Q ++RKQLLG KL
Sbjct: 374 NSLVLQPISQSQAEIRKQLLGSSPSGKL 401
>RGD|1311740 [details] [associations]
symbol:Dhx32 "DEAH (Asp-Glu-Ala-His) box polypeptide 32"
species:10116 "Rattus norvegicus" [GO:0004386 "helicase activity"
evidence=IEA] InterPro:IPR007502 Pfam:PF04408 SMART:SM00847
RGD:1311740 GO:GO:0004386 InterPro:IPR011709 Pfam:PF07717
GeneTree:ENSGT00650000093246 CTD:55760 OMA:LACEQDI
OrthoDB:EOG4N30NF EMBL:CH473953 IPI:IPI00366073
RefSeq:NP_001123511.1 UniGene:Rn.162500 Ensembl:ENSRNOT00000024655
GeneID:361667 KEGG:rno:361667 UCSC:RGD:1311740 NextBio:677165
Uniprot:D3ZGJ0
Length = 751
Score = 306 (112.8 bits), Expect = 3.6e-24, P = 3.6e-24
Identities = 70/228 (30%), Positives = 118/228 (51%)
Query: 12 MAEFPLEPNLSKMLIMSVHLQCSDEVLTIVSMLSVQNVFYR-PXXXXXXXXXXXXXFNQM 70
M+EFPL+P LSK ++ S C DE+LTI +M++ + F P F
Sbjct: 489 MSEFPLDPQLSKSILASCEFDCVDEMLTIAAMVTAPSCFLHVPHGAEEAAVTCWKTFLHP 548
Query: 71 EGDHITLLAVYNSWRNNKFSNA-------WCYENFVQIRTLKRAQDVRKQLLGIMDRHKL 123
EGDH TL+ +YN++++ ++A WC+ F+ L+ A +R +LL I+ R +L
Sbjct: 549 EGDHFTLINIYNAYQDTVLNSANEHCVETWCHNCFLSCSALRMADVIRAELLEIIKRIEL 608
Query: 124 DVVSAG----KNTVRVQKAVCSGFFRNAAKK-DPQEGYRTLVDSQVVYIHPSS--ALFNR 176
+N + ++KA+ SG+F A+ D Y L QV +HP S A+ +
Sbjct: 609 PYAEPAFGSQENGLNIKKALLSGYFMQIARDVDGSGNYLMLTHKQVAQLHPLSSYAITKK 668
Query: 177 QPEWVIYHELVQTTKEYMREVTSIDPKWLVEFAPAFFKFSD-PTKLSK 223
PEWV++H+ + Y+R +++ P+ ++ P ++ FS+ P SK
Sbjct: 669 MPEWVLFHQFSISENNYIRVTSAVSPELFMQLVPQYY-FSNLPPSESK 715
Score = 150 (57.9 bits), Expect = 3.0e-16, Sum P(2) = 3.0e-16
Identities = 36/122 (29%), Positives = 64/122 (52%)
Query: 331 VRKQLLGIMDRHKLDVVSAG----KNTVRVQKAVCSGFFRNAAKK-DPQEGYRTLVDSQV 385
+R +LL I+ R +L +N + ++KA+ SG+F A+ D Y L QV
Sbjct: 595 IRAELLEIIKRIELPYAEPAFGSQENGLNIKKALLSGYFMQIARDVDGSGNYLMLTHKQV 654
Query: 386 VYIHPSS--ALFNRQPEWVIYHELVQTTKEYMREVTSIDPKWLVEFAPAFFKFSD-PTKL 442
+HP S A+ + PEWV++H+ + Y+R +++ P+ ++ P ++ FS+ P
Sbjct: 655 AQLHPLSSYAITKKMPEWVLFHQFSISENNYIRVTSAVSPELFMQLVPQYY-FSNLPPSE 713
Query: 443 SK 444
SK
Sbjct: 714 SK 715
Score = 136 (52.9 bits), Expect = 3.0e-16, Sum P(2) = 3.0e-16
Identities = 29/90 (32%), Positives = 49/90 (54%)
Query: 244 GLLKQAVKKRPEIKLIVTSATLDAVKFSSYFFEAPIFTIPGRTFPVEVLYTKEPETDYLD 303
GLLK + RPE+KLI+ + + SSY+ P+ + + PVEV+Y + D +
Sbjct: 206 GLLKDVLLARPELKLIINCSPFLISRLSSYYGNVPLLEVRNK-HPVEVVYLSGAQKDPFE 264
Query: 304 ASLITVMQIHLREPPGDVLLFLTGKLDVRK 333
+ + + +IH GDV++FL + D+ K
Sbjct: 265 SVVRLIFEIHRSGEQGDVVVFLACEQDIEK 294
Score = 85 (35.0 bits), Expect = 2.0e-09, Sum P(2) = 2.0e-09
Identities = 22/84 (26%), Positives = 43/84 (51%)
Query: 469 EEIDTACEILYERMKSLGPDVPELIILPVYSALPSEMQTRIFEA---APPGSRKVVIATN 525
++I+ EI+ + +L PDV EL+++P+Y + + E R+VV+ T+
Sbjct: 290 QDIEKTYEIVCQEGSNLNPDVGELVVIPLYPKEKCSLFRPVDETEKRCQASQRRVVLTTS 349
Query: 526 IAETSLTIDGIFYVVDPFDIEVRQ 549
E+ + + +V+D +E RQ
Sbjct: 350 CGESLIWSHTVRFVID-VGLERRQ 372
Score = 41 (19.5 bits), Expect = 2.0e-06, Sum P(2) = 2.0e-06
Identities = 10/28 (35%), Positives = 18/28 (64%)
Query: 97 NFVQIRTLKRAQ-DVRKQLLGIMDRHKL 123
N + ++ + ++Q ++RKQLLG KL
Sbjct: 381 NSLVLQPISQSQAEIRKQLLGSSPSGKL 408
>UNIPROTKB|A7MBI4 [details] [associations]
symbol:DHX32 "DHX32 protein" species:9913 "Bos taurus"
[GO:0005524 "ATP binding" evidence=IEA] [GO:0004386 "helicase
activity" evidence=IEA] InterPro:IPR007502 Pfam:PF04408
SMART:SM00847 GO:GO:0005524 GO:GO:0004386 InterPro:IPR014001
PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
HOGENOM:HOG000175261 GeneTree:ENSGT00650000093246
HOVERGEN:HBG039428 CTD:55760 OMA:LACEQDI OrthoDB:EOG4N30NF
EMBL:DAAA02059534 EMBL:DAAA02059535 EMBL:DAAA02059536 EMBL:BC151578
IPI:IPI00715161 RefSeq:NP_001094614.1 UniGene:Bt.44006
Ensembl:ENSBTAT00000007619 GeneID:532978 KEGG:bta:532978
InParanoid:A7MBI4 NextBio:20875863 Uniprot:A7MBI4
Length = 744
Score = 308 (113.5 bits), Expect = 1.1e-23, Sum P(2) = 1.1e-23
Identities = 71/228 (31%), Positives = 119/228 (52%)
Query: 12 MAEFPLEPNLSKMLIMSVHLQCSDEVLTIVSMLSVQNVF-YRPXXXXXXXXXXXXXFNQM 70
M+EFPL+P LSK ++ S C DE+LTI +M++ N F + P F
Sbjct: 482 MSEFPLDPQLSKSILASCEFDCVDEMLTIAAMVTAPNCFSHLPRGAEEAALSCWKTFLHP 541
Query: 71 EGDHITLLAVYNSWRNNKFSNA-------WCYENFVQIRTLKRAQDVRKQLLGIMDRHKL 123
+GDH TL+ +Y ++++ + A WC++ F+ L+ A+ +R +LL I+ R +L
Sbjct: 542 DGDHFTLINIYKAYQDMTLNAASEHCVEKWCHDYFLNCSALRTAEVIRAELLEIIKRIEL 601
Query: 124 DVVSAG----KNTVRVQKAVCSGFFRNAAKK-DPQEGYRTLVDSQVVYIHPSS--ALFNR 176
+NT+ ++KA+ SG+F A+ D Y L QV +HP S ++ +
Sbjct: 602 PYTEPAFGSKENTLNIKKALLSGYFMQIARDVDGAGNYLMLTHKQVAQLHPLSCYSVARK 661
Query: 177 QPEWVIYHELVQTTKEYMREVTSIDPKWLVEFAPAFFKFSD-PTKLSK 223
PEWV++H+ Y+R + I P+ ++ AP ++ FS+ P SK
Sbjct: 662 MPEWVLFHKFSIANNNYIRTASEIAPELFMQLAPQYY-FSNLPPSESK 708
Score = 154 (59.3 bits), Expect = 1.4e-16, Sum P(2) = 1.4e-16
Identities = 38/122 (31%), Positives = 64/122 (52%)
Query: 331 VRKQLLGIMDRHKLDVVSAG----KNTVRVQKAVCSGFFRNAAKK-DPQEGYRTLVDSQV 385
+R +LL I+ R +L +NT+ ++KA+ SG+F A+ D Y L QV
Sbjct: 588 IRAELLEIIKRIELPYTEPAFGSKENTLNIKKALLSGYFMQIARDVDGAGNYLMLTHKQV 647
Query: 386 VYIHPSS--ALFNRQPEWVIYHELVQTTKEYMREVTSIDPKWLVEFAPAFFKFSD-PTKL 442
+HP S ++ + PEWV++H+ Y+R + I P+ ++ AP ++ FS+ P
Sbjct: 648 AQLHPLSCYSVARKMPEWVLFHKFSIANNNYIRTASEIAPELFMQLAPQYY-FSNLPPSE 706
Query: 443 SK 444
SK
Sbjct: 707 SK 708
Score = 135 (52.6 bits), Expect = 1.4e-16, Sum P(2) = 1.4e-16
Identities = 29/90 (32%), Positives = 49/90 (54%)
Query: 244 GLLKQAVKKRPEIKLIVTSATLDAVKFSSYFFEAPIFTIPGRTFPVEVLYTKEPETDYLD 303
GLLK + RPE+KLI+ S+ K SSY+ P+ + + PVE +Y + + +
Sbjct: 199 GLLKDVLLARPELKLIINSSPHLINKLSSYYGNVPLIQVKNK-HPVEAVYLSGAQKESFE 257
Query: 304 ASLITVMQIHLREPPGDVLLFLTGKLDVRK 333
+ L + +IH GD+++FL + D+ K
Sbjct: 258 SILRLIFEIHHSGEKGDIVVFLACEQDIEK 287
Score = 80 (33.2 bits), Expect = 8.1e-09, Sum P(2) = 8.1e-09
Identities = 22/79 (27%), Positives = 46/79 (58%)
Query: 469 EEIDTACEILYERMKSLGPDVPELIILPVYS----AL--PSEMQTRIFEAAPPGSRKVVI 522
++I+ A EI+ + +L PD+ EL+++P+Y AL P++ +T + P R+VV+
Sbjct: 283 QDIEKAYEIVCQEGSNLNPDLGELVVVPLYPKEKCALFKPND-ETE--KRCPVYQRRVVL 339
Query: 523 ATNIAETSLTIDGIFYVVD 541
+ E+ + + + +V+D
Sbjct: 340 TASSGESLICSNTVKFVID 358
Score = 37 (18.1 bits), Expect = 1.1e-23, Sum P(2) = 1.1e-23
Identities = 8/10 (80%), Positives = 8/10 (80%)
Query: 2 DSLVVTPISQ 11
DSLV PISQ
Sbjct: 374 DSLVTQPISQ 383
>UNIPROTKB|F1PER1 [details] [associations]
symbol:DHX32 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] InterPro:IPR007502
Pfam:PF04408 SMART:SM00847 GO:GO:0005524 GO:GO:0004386
InterPro:IPR014001 PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717
GeneTree:ENSGT00650000093246 CTD:55760 OMA:LACEQDI
EMBL:AAEX03015636 RefSeq:XP_003433686.1 Ensembl:ENSCAFT00000020520
GeneID:100685023 KEGG:cfa:100685023 Uniprot:F1PER1
Length = 745
Score = 301 (111.0 bits), Expect = 1.3e-23, P = 1.3e-23
Identities = 74/253 (29%), Positives = 128/253 (50%)
Query: 12 MAEFPLEPNLSKMLIMSVHLQCSDEVLTIVSMLSVQNVFYR-PXXXXXXXXXXXXXFNQM 70
M+EFPL+P LSK ++ S C +E+LTI +M++ N F P F
Sbjct: 482 MSEFPLDPQLSKSILASCEFDCVEEMLTIAAMVTAPNCFSNLPHGAEEAALTCWKTFLHP 541
Query: 71 EGDHITLLAVYNSWRN---NKFSN----AWCYENFVQIRTLKRAQDVRKQLLGIMDRHKL 123
EGDH TL+ +Y ++++ N S+ WC++ F+ L+ A +R +LL I+ R +L
Sbjct: 542 EGDHFTLINIYKAYQDIALNSTSDHCVEKWCHDYFLNCCALRMADVIRAELLEIVKRIEL 601
Query: 124 DVVSAG----KNTVRVQKAVCSGFFRNAAKK-DPQEGYRTLVDSQVVYIHPSSA--LFNR 176
+N + ++KA+ SG+F A+ D Y L QV +HP S+ + +
Sbjct: 602 PCAEPAFGSKENALNIKKALLSGYFMQIARDVDGSGNYLMLTHKQVAQLHPLSSYSITKK 661
Query: 177 QPEWVIYHELVQTTKEYMREVTSIDPKWLVEFAPAFFKFSD-PTKLSKFKKNQRLEPLQR 235
PEWV++H+ + Y+R + I P+ ++ AP ++ FS+ P SK Q ++ L
Sbjct: 662 MPEWVLFHKFSISENNYIRITSEISPELFMQLAPPYY-FSNLPPSESKDILRQVMDHLSP 720
Query: 236 TNRISFPPGLLKQ 248
+ + P + ++
Sbjct: 721 LSTMKKEPKMCEK 733
Score = 164 (62.8 bits), Expect = 1.3e-18, Sum P(2) = 1.3e-18
Identities = 46/158 (29%), Positives = 75/158 (47%)
Query: 331 VRKQLLGIMDRHKLDVVSAG----KNTVRVQKAVCSGFFRNAAKK-DPQEGYRTLVDSQV 385
+R +LL I+ R +L +N + ++KA+ SG+F A+ D Y L QV
Sbjct: 588 IRAELLEIVKRIELPCAEPAFGSKENALNIKKALLSGYFMQIARDVDGSGNYLMLTHKQV 647
Query: 386 VYIHPSSA--LFNRQPEWVIYHELVQTTKEYMREVTSIDPKWLVEFAPAFFKFSD-PTKL 442
+HP S+ + + PEWV++H+ + Y+R + I P+ ++ AP ++ FS+ P
Sbjct: 648 AQLHPLSSYSITKKMPEWVLFHKFSISENNYIRITSEISPELFMQLAPPYY-FSNLPPSE 706
Query: 443 SKFKKNQ---RLEPLYNKYEEPNAWRISREEIDTACEI 477
SK Q L PL +EP E + C I
Sbjct: 707 SKDILRQVMDHLSPLSTMKKEPKMCEKCPETTEQRCTI 744
Score = 144 (55.7 bits), Expect = 1.3e-18, Sum P(2) = 1.3e-18
Identities = 31/90 (34%), Positives = 51/90 (56%)
Query: 244 GLLKQAVKKRPEIKLIVTSATLDAVKFSSYFFEAPIFTIPGRTFPVEVLYTKEPETDYLD 303
GLLK + RPE+KLI+ S+ K SSY+ P+ + + PVEV+Y + + L+
Sbjct: 199 GLLKDVLLARPELKLIINSSPHLISKLSSYYGNVPLIEVK-KQHPVEVVYLSGAQKESLE 257
Query: 304 ASLITVMQIHLREPPGDVLLFLTGKLDVRK 333
+ L + +IH GD+++FL + D+ K
Sbjct: 258 SILRLIFEIHQSGEKGDIVVFLACEQDIEK 287
Score = 71 (30.1 bits), Expect = 7.2e-09, Sum P(2) = 7.2e-09
Identities = 21/79 (26%), Positives = 45/79 (56%)
Query: 469 EEIDTACEILYERMKSLGPDVPELIILPVYS----AL--PSEMQTRIFEAAPPGSRKVVI 522
++I+ A EI+ + +L PD+ EL+++P+Y AL P++ +T + R+VV+
Sbjct: 283 QDIEKAYEIVCQEGSNLNPDLGELVVVPLYPKEKCALFKPND-ETE--KRCQVYQRRVVL 339
Query: 523 ATNIAETSLTIDGIFYVVD 541
+ E+ + + + +V+D
Sbjct: 340 TASSGESLIWSNTVRFVID 358
Score = 37 (18.1 bits), Expect = 1.5e-07, Sum P(2) = 1.5e-07
Identities = 9/28 (32%), Positives = 17/28 (60%)
Query: 97 NFVQIRTLKRAQ-DVRKQLLGIMDRHKL 123
N + + + ++Q ++RKQ+LG KL
Sbjct: 374 NSLVTQPISQSQAEIRKQILGSSSSGKL 401
>MGI|MGI:1914737 [details] [associations]
symbol:Dhx40 "DEAH (Asp-Glu-Ala-His) box polypeptide 40"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005575 "cellular_component"
evidence=ND] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0008150 "biological_process" evidence=ND]
[GO:0016787 "hydrolase activity" evidence=IEA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 MGI:MGI:1914737
GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 HOGENOM:HOG000175261 EMBL:AL592222 HOVERGEN:HBG039428
GeneTree:ENSGT00700000104421 CTD:79665 OMA:LYGSMPT EMBL:AK004610
EMBL:AK010512 EMBL:AK031000 EMBL:AK075991 EMBL:AL596111
EMBL:BC058276 IPI:IPI00453964 RefSeq:NP_080467.3 UniGene:Mm.260627
ProteinModelPortal:Q6PE54 SMR:Q6PE54 STRING:Q6PE54
PhosphoSite:Q6PE54 PaxDb:Q6PE54 PRIDE:Q6PE54
Ensembl:ENSMUST00000018569 GeneID:67487 KEGG:mmu:67487
UCSC:uc007ktc.1 InParanoid:Q6PE54 OrthoDB:EOG48PMJH NextBio:324718
Bgee:Q6PE54 CleanEx:MM_DHX40 Genevestigator:Q6PE54
GermOnline:ENSMUSG00000018425 Uniprot:Q6PE54
Length = 779
Score = 253 (94.1 bits), Expect = 3.0e-18, P = 3.0e-18
Identities = 74/257 (28%), Positives = 125/257 (48%)
Query: 12 MAEFPLEPNLSKMLIMSVHLQCSDEVLTIVSMLSVQNVFYRPXX--XXXXXXXXXXXFNQ 69
M EFPL P+L+ +I + L C D +L I +MLSV+NVF RP
Sbjct: 486 MVEFPLPPHLTCAVIRAASLDCEDLLLPIAAMLSVENVFIRPVDPEYQKEAEQRHRELAA 545
Query: 70 MEG---DHITLLAVYNSWRNNKFSNAWCYENFVQIRTLKRAQDVRKQLLGIMDRHKL--- 123
G D TL ++ +++ +WC ++++ R L A V QL ++ + K
Sbjct: 546 KAGGFNDFATLAVIFEQCKSSGAPASWCQKHWIHWRCLFSAFRVEAQLRELIRKLKQQSD 605
Query: 124 ---DVVSAGKNTVRVQKAVCSGFFRNAAKKDPQEGYRTLVD-SQVVYIHPSSALFNRQP- 178
+ K+ V +++ +C+G+F+N A++ + T+ V+IHPSSAL ++
Sbjct: 606 FPRETFEGPKHEV-LRRCLCAGYFKNVARRSVGRTFCTMDGRGSPVHIHPSSALHEQETK 664
Query: 179 -EWVIYHELVQTTKEYMREVTSIDPKWLVEFAPAFFKFSDPTKLSKFKKNQRLEPLQR-- 235
EW+I+HE++ TTK Y R V I +W+ + P + + LS + + E +R
Sbjct: 665 LEWIIFHEVLVTTKVYARIVCPIRYEWVRDLLPKLHELN-AHDLSSVARREMREDARRKW 723
Query: 236 TNRISFPPGLLKQAVKK 252
TN+ + LK + K
Sbjct: 724 TNKENVKQ--LKDGISK 738
Score = 180 (68.4 bits), Expect = 3.0e-23, Sum P(2) = 3.0e-23
Identities = 49/128 (38%), Positives = 71/128 (55%)
Query: 217 DPTKLSKFKKNQRLEPLQRTNRISFPPGLLKQAVK-KRPE----IKLIVTSATLDAVKFS 271
DP LSKF E +RT GLLK+ + K P +K++V SAT++ K S
Sbjct: 161 DPN-LSKFSVIILDEAHERTLTTDILFGLLKKLFQDKSPNRKEHLKVVVMSATMELAKLS 219
Query: 272 SYFFEAPIFTIPGRTFPVE-----VLYTKEPE-TDYLDASLITVMQIHLREPPGDVLLFL 325
++F PIF IPGR +PV ++ ++ E T Y+ A + M IHL E GD+L+FL
Sbjct: 220 AFFGNCPIFDIPGRLYPVREKFCNLIGPRDRENTAYIQAIVKVTMDIHLNEMAGDILVFL 279
Query: 326 TGKLDVRK 333
TG+ ++ K
Sbjct: 280 TGQFEIEK 287
Score = 172 (65.6 bits), Expect = 3.0e-23, Sum P(2) = 3.0e-23
Identities = 39/79 (49%), Positives = 54/79 (68%)
Query: 470 EIDTACEILYERMKSLGPD--VPE-----LIILPVYSALPSEMQTRIFEAAPPGSRKVVI 522
EI+ +CE+L++ +S+ D V + L+ILP Y ++ ++ Q RIF PPG RK VI
Sbjct: 284 EIEKSCELLFQMAESVDYDYDVQDTTLDGLLILPCYGSMTTDQQRRIFLPPPPGIRKCVI 343
Query: 523 ATNIAETSLTIDGIFYVVD 541
+TNI+ TSLTIDGI YVVD
Sbjct: 344 STNISATSLTIDGIRYVVD 362
Score = 144 (55.7 bits), Expect = 2.5e-20, Sum P(2) = 2.5e-20
Identities = 32/106 (30%), Positives = 58/106 (54%)
Query: 356 VQKAVCSGFFRNAAKKDPQEGYRTLVD-SQVVYIHPSSALFNRQP--EWVIYHELVQTTK 412
+++ +C+G+F+N A++ + T+ V+IHPSSAL ++ EW+I+HE++ TTK
Sbjct: 619 LRRCLCAGYFKNVARRSVGRTFCTMDGRGSPVHIHPSSALHEQETKLEWIIFHEVLVTTK 678
Query: 413 EYMREVTSIDPKWLVEFAPAFFKFSDPTKLSKFKKNQRLEPLYNKY 458
Y R V I +W+ + P + + LS + + E K+
Sbjct: 679 VYARIVCPIRYEWVRDLLPKLHELN-AHDLSSVARREMREDARRKW 723
Score = 38 (18.4 bits), Expect = 2.5e-09, Sum P(2) = 2.5e-09
Identities = 11/32 (34%), Positives = 16/32 (50%)
Query: 475 CEILYERMKSLGPDVPELIILPVYSALPSEMQ 506
C I YE ++ L P + EL + S EM+
Sbjct: 685 CPIRYEWVRDLLPKLHELNAHDLSSVARREMR 716
>UNIPROTKB|F1SDM5 [details] [associations]
symbol:DHX32 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0004386 "helicase activity" evidence=IEA]
InterPro:IPR007502 Pfam:PF04408 SMART:SM00847 GO:GO:0004386
InterPro:IPR011709 Pfam:PF07717 GeneTree:ENSGT00650000093246
OMA:LACEQDI EMBL:CT841550 Ensembl:ENSSSCT00000011756 Uniprot:F1SDM5
Length = 742
Score = 303 (111.7 bits), Expect = 3.3e-23, Sum P(2) = 3.3e-23
Identities = 72/228 (31%), Positives = 118/228 (51%)
Query: 12 MAEFPLEPNLSKMLIMSVHLQCSDEVLTIVSMLSVQNVF-YRPXXXXXXXXXXXXXFNQM 70
M+EFPL+P LSK ++ S C DE+LTI +M++ N F + P F
Sbjct: 483 MSEFPLDPQLSKSILASCEFDCVDEMLTIAAMVTAPNCFSHLPSGAEAEALTCWKTFLHP 542
Query: 71 EGDHITLLAVYNSWRN---NKFSN----AWCYENFVQIRTLKRAQDVRKQLLGIMDRHKL 123
EGDH TL+ +Y ++++ N S WC++ F+ L+ A +R +LL I+ R +L
Sbjct: 543 EGDHFTLVNLYKAFQDVTLNSTSEHCVEKWCHDYFLNCSALRMADVIRAELLEIIKRIEL 602
Query: 124 DVVSAG----KNTVRVQKAVCSGFFRNAAKK-DPQEGYRTLVDSQVVYIHPSS--ALFNR 176
+NT+ ++KA+ SG+F A+ D Y L QV +HP S ++ +
Sbjct: 603 PYAEPAFGSKENTLNIKKALLSGYFMQIARDVDGSGNYLMLTHKQVAQLHPLSCYSVTKK 662
Query: 177 QPEWVIYHELVQTTKEYMREVTSIDPKWLVEFAPAFFKFSD-PTKLSK 223
PEWV++H+ + Y+R + I P+ ++ P ++ FS+ P SK
Sbjct: 663 MPEWVLFHKFSISENNYIRIASEISPELFMQLVPQYY-FSNLPPSESK 709
Score = 151 (58.2 bits), Expect = 6.9e-17, Sum P(2) = 6.9e-17
Identities = 37/122 (30%), Positives = 64/122 (52%)
Query: 331 VRKQLLGIMDRHKLDVVSAG----KNTVRVQKAVCSGFFRNAAKK-DPQEGYRTLVDSQV 385
+R +LL I+ R +L +NT+ ++KA+ SG+F A+ D Y L QV
Sbjct: 589 IRAELLEIIKRIELPYAEPAFGSKENTLNIKKALLSGYFMQIARDVDGSGNYLMLTHKQV 648
Query: 386 VYIHPSS--ALFNRQPEWVIYHELVQTTKEYMREVTSIDPKWLVEFAPAFFKFSD-PTKL 442
+HP S ++ + PEWV++H+ + Y+R + I P+ ++ P ++ FS+ P
Sbjct: 649 AQLHPLSCYSVTKKMPEWVLFHKFSISENNYIRIASEISPELFMQLVPQYY-FSNLPPSE 707
Query: 443 SK 444
SK
Sbjct: 708 SK 709
Score = 141 (54.7 bits), Expect = 6.9e-17, Sum P(2) = 6.9e-17
Identities = 31/90 (34%), Positives = 50/90 (55%)
Query: 244 GLLKQAVKKRPEIKLIVTSATLDAVKFSSYFFEAPIFTIPGRTFPVEVLYTKEPETDYLD 303
GLLK + RPE+KLI+ S+ SSY+ P+ + + PVEV+Y + + L+
Sbjct: 199 GLLKDVLLARPELKLIINSSPHLISTLSSYYGNVPLIEVTSKR-PVEVVYLSGAQKEALE 257
Query: 304 ASLITVMQIHLREPPGDVLLFLTGKLDVRK 333
A L + +IH GD+++FL + D+ K
Sbjct: 258 AVLRLIFEIHHSGEEGDIVVFLACEQDIEK 287
Score = 74 (31.1 bits), Expect = 7.4e-09, Sum P(2) = 7.4e-09
Identities = 22/87 (25%), Positives = 45/87 (51%)
Query: 469 EEIDTACEILYERMKSLGPDVPELIILPVYSALPSEMQTRIFEA---APPGSRKVVIATN 525
++I+ A EI+ + +L PD+ EL+++P+Y + EA R+VV+ +
Sbjct: 283 QDIEKAYEIVCQEGTNLNPDLGELVVVPLYPKEKCALFKPNDEAEKRCQVYQRRVVLTAS 342
Query: 526 IAETSLTIDGIFYVVDPFDIEVRQAKY 552
E+ + + + +V+D +E R+ Y
Sbjct: 343 SGESLIWSNTVRFVID-VGVERRKKVY 368
Score = 38 (18.4 bits), Expect = 3.3e-23, Sum P(2) = 3.3e-23
Identities = 8/10 (80%), Positives = 9/10 (90%)
Query: 2 DSLVVTPISQ 11
DSLV+ PISQ
Sbjct: 375 DSLVLQPISQ 384
>GENEDB_PFALCIPARUM|PFL1525c [details] [associations]
symbol:PFL1525c "pre-mRNA splicing factor RNA
helicase, putative" species:5833 "Plasmodium falciparum"
[GO:0051726 "regulation of cell cycle" evidence=ISS] [GO:0008380
"RNA splicing" evidence=ISS] [GO:0004004 "ATP-dependent RNA
helicase activity" evidence=ISS] [GO:0005681 "spliceosomal complex"
evidence=ISS] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 GO:GO:0005524 GO:GO:0008380 GO:GO:0005681
GO:GO:0003676 GO:GO:0051726 EMBL:AE014188 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717
GO:GO:0004004 HOGENOM:HOG000175261 KO:K01509 RefSeq:XP_001350711.1
ProteinModelPortal:Q8I5A4 IntAct:Q8I5A4 MINT:MINT-1581184
PRIDE:Q8I5A4 EnsemblProtists:PFL1525c:mRNA GeneID:811357
KEGG:pfa:PFL1525c EuPathDB:PlasmoDB:PF3D7_1231600
ProtClustDB:CLSZ2514931 Uniprot:Q8I5A4
Length = 1168
Score = 259 (96.2 bits), Expect = 1.2e-18, P = 1.2e-18
Identities = 62/216 (28%), Positives = 112/216 (51%)
Query: 11 QMAEFPLEPNLSKMLIMSVH-LQCSDEVLTIVSMLS-VQNVFYRPXXXXXXXXXXXXXFN 68
+MAEFP + SKM++ + C DE+L + SML+ N+FY F
Sbjct: 948 KMAEFPTDVKSSKMILSAAEKYNCVDEILNVASMLTHANNIFYVQKGKEKEAENIKKMFI 1007
Query: 69 -QMEGDHITLLAVYNSWRNNKFSNAWCYENFVQIRTLKRAQDVRKQLLGIMDRHKLDVVS 127
+ GD + L +Y N FS ++CY++F+Q TL + +DV+ QLL I ++ + + +
Sbjct: 1008 IEGGGDFLLFLNIYKQCEENNFSTSFCYDHFLQYHTLIKVKDVKTQLLSICEKIDIPITT 1067
Query: 128 AG----KNTVRVQKAVCSGFFRNAAKKDPQEGYRTLVDSQVVYIHPSSALFNR------Q 177
G ++ ++K++ S FF NAA + + + +QVV I+P+S LF + +
Sbjct: 1068 CGIENHESINNIKKSIVSAFFTNAALPVNKTELKIIKLNQVVSIYPNSVLFKKNIMEENE 1127
Query: 178 PEWVIYHELVQTTKEYMREVTSIDPKWLVEFAPAFF 213
+I++E+++ K Y+R ++ L + A +F
Sbjct: 1128 NVCIIFYEVIKLNKSYIRHNIPVNKNLLFQIADFYF 1163
Score = 207 (77.9 bits), Expect = 4.2e-23, Sum P(4) = 4.2e-23
Identities = 37/87 (42%), Positives = 62/87 (71%)
Query: 245 LLKQAVKKRPEIKLIVTSATLDAVKFSSYFFEAPIFTIPGRTFPVEVLYTKEPETDYLDA 304
++K R I+++++SATLDA K S+YF APIF +PGR + V++ YT E++Y+ A
Sbjct: 573 IVKDICNFRENIRVVISSATLDAEKISTYFNCAPIFYVPGRKYNVDIYYTINNESNYISA 632
Query: 305 SLITVMQIHLREPPGDVLLFLTGKLDV 331
+IT++QIH+ + GD+L+FL G+ ++
Sbjct: 633 IVITILQIHITQGKGDILVFLPGQYEI 659
Score = 117 (46.2 bits), Expect = 1.2e-20, Sum P(3) = 1.2e-20
Identities = 30/115 (26%), Positives = 61/115 (53%)
Query: 330 DVRKQLLGIMDRHKLDVVSAG----KNTVRVQKAVCSGFFRNAAKKDPQEGYRTLVDSQV 385
DV+ QLL I ++ + + + G ++ ++K++ S FF NAA + + + +QV
Sbjct: 1049 DVKTQLLSICEKIDIPITTCGIENHESINNIKKSIVSAFFTNAALPVNKTELKIIKLNQV 1108
Query: 386 VYIHPSSALFNR------QPEWVIYHELVQTTKEYMREVTSIDPKWLVEFAPAFF 434
V I+P+S LF + + +I++E+++ K Y+R ++ L + A +F
Sbjct: 1109 VSIYPNSVLFKKNIMEENENVCIIFYEVIKLNKSYIRHNIPVNKNLLFQIADFYF 1163
Score = 94 (38.1 bits), Expect = 4.2e-23, Sum P(4) = 4.2e-23
Identities = 19/42 (45%), Positives = 26/42 (61%)
Query: 470 EIDTACEILYERMKSLGPDVPELIILPVYSALPSEMQTRIFE 511
EI+ + L ++ L P L+ILP+YS+LP E Q RIFE
Sbjct: 658 EIELVQQELENKLNELAPKYRNLVILPIYSSLPVEYQARIFE 699
Score = 88 (36.0 bits), Expect = 4.2e-23, Sum P(4) = 4.2e-23
Identities = 15/24 (62%), Positives = 21/24 (87%)
Query: 518 RKVVIATNIAETSLTIDGIFYVVD 541
RK++++TNI ETS+TID I YV+D
Sbjct: 803 RKIILSTNICETSITIDNIVYVID 826
Score = 51 (23.0 bits), Expect = 4.2e-23, Sum P(4) = 4.2e-23
Identities = 16/53 (30%), Positives = 26/53 (49%)
Query: 73 DHITLLAVYNSWRNNKFSNAWCYENFVQIRTLKRAQDVRKQLLGIMDRHKLDV 125
D +L Y RN K N E +++ LK+ D R++ L ++ KLD+
Sbjct: 40 DSYSLYLEYQKGRNKKLKNN---EEYIEY--LKK--DARRKYLKEREKEKLDI 85
>UNIPROTKB|Q8I5A4 [details] [associations]
symbol:PFL1525c "Pre-mRNA splicing factor RNA helicase,
putative" species:36329 "Plasmodium falciparum 3D7" [GO:0004004
"ATP-dependent RNA helicase activity" evidence=ISS] [GO:0005681
"spliceosomal complex" evidence=ISS] [GO:0008380 "RNA splicing"
evidence=ISS] [GO:0051726 "regulation of cell cycle" evidence=ISS]
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408
PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
GO:GO:0005524 GO:GO:0008380 GO:GO:0005681 GO:GO:0003676
GO:GO:0051726 EMBL:AE014188 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717 GO:GO:0004004
HOGENOM:HOG000175261 KO:K01509 RefSeq:XP_001350711.1
ProteinModelPortal:Q8I5A4 IntAct:Q8I5A4 MINT:MINT-1581184
PRIDE:Q8I5A4 EnsemblProtists:PFL1525c:mRNA GeneID:811357
KEGG:pfa:PFL1525c EuPathDB:PlasmoDB:PF3D7_1231600
ProtClustDB:CLSZ2514931 Uniprot:Q8I5A4
Length = 1168
Score = 259 (96.2 bits), Expect = 1.2e-18, P = 1.2e-18
Identities = 62/216 (28%), Positives = 112/216 (51%)
Query: 11 QMAEFPLEPNLSKMLIMSVH-LQCSDEVLTIVSMLS-VQNVFYRPXXXXXXXXXXXXXFN 68
+MAEFP + SKM++ + C DE+L + SML+ N+FY F
Sbjct: 948 KMAEFPTDVKSSKMILSAAEKYNCVDEILNVASMLTHANNIFYVQKGKEKEAENIKKMFI 1007
Query: 69 -QMEGDHITLLAVYNSWRNNKFSNAWCYENFVQIRTLKRAQDVRKQLLGIMDRHKLDVVS 127
+ GD + L +Y N FS ++CY++F+Q TL + +DV+ QLL I ++ + + +
Sbjct: 1008 IEGGGDFLLFLNIYKQCEENNFSTSFCYDHFLQYHTLIKVKDVKTQLLSICEKIDIPITT 1067
Query: 128 AG----KNTVRVQKAVCSGFFRNAAKKDPQEGYRTLVDSQVVYIHPSSALFNR------Q 177
G ++ ++K++ S FF NAA + + + +QVV I+P+S LF + +
Sbjct: 1068 CGIENHESINNIKKSIVSAFFTNAALPVNKTELKIIKLNQVVSIYPNSVLFKKNIMEENE 1127
Query: 178 PEWVIYHELVQTTKEYMREVTSIDPKWLVEFAPAFF 213
+I++E+++ K Y+R ++ L + A +F
Sbjct: 1128 NVCIIFYEVIKLNKSYIRHNIPVNKNLLFQIADFYF 1163
Score = 207 (77.9 bits), Expect = 4.2e-23, Sum P(4) = 4.2e-23
Identities = 37/87 (42%), Positives = 62/87 (71%)
Query: 245 LLKQAVKKRPEIKLIVTSATLDAVKFSSYFFEAPIFTIPGRTFPVEVLYTKEPETDYLDA 304
++K R I+++++SATLDA K S+YF APIF +PGR + V++ YT E++Y+ A
Sbjct: 573 IVKDICNFRENIRVVISSATLDAEKISTYFNCAPIFYVPGRKYNVDIYYTINNESNYISA 632
Query: 305 SLITVMQIHLREPPGDVLLFLTGKLDV 331
+IT++QIH+ + GD+L+FL G+ ++
Sbjct: 633 IVITILQIHITQGKGDILVFLPGQYEI 659
Score = 117 (46.2 bits), Expect = 1.2e-20, Sum P(3) = 1.2e-20
Identities = 30/115 (26%), Positives = 61/115 (53%)
Query: 330 DVRKQLLGIMDRHKLDVVSAG----KNTVRVQKAVCSGFFRNAAKKDPQEGYRTLVDSQV 385
DV+ QLL I ++ + + + G ++ ++K++ S FF NAA + + + +QV
Sbjct: 1049 DVKTQLLSICEKIDIPITTCGIENHESINNIKKSIVSAFFTNAALPVNKTELKIIKLNQV 1108
Query: 386 VYIHPSSALFNR------QPEWVIYHELVQTTKEYMREVTSIDPKWLVEFAPAFF 434
V I+P+S LF + + +I++E+++ K Y+R ++ L + A +F
Sbjct: 1109 VSIYPNSVLFKKNIMEENENVCIIFYEVIKLNKSYIRHNIPVNKNLLFQIADFYF 1163
Score = 94 (38.1 bits), Expect = 4.2e-23, Sum P(4) = 4.2e-23
Identities = 19/42 (45%), Positives = 26/42 (61%)
Query: 470 EIDTACEILYERMKSLGPDVPELIILPVYSALPSEMQTRIFE 511
EI+ + L ++ L P L+ILP+YS+LP E Q RIFE
Sbjct: 658 EIELVQQELENKLNELAPKYRNLVILPIYSSLPVEYQARIFE 699
Score = 88 (36.0 bits), Expect = 4.2e-23, Sum P(4) = 4.2e-23
Identities = 15/24 (62%), Positives = 21/24 (87%)
Query: 518 RKVVIATNIAETSLTIDGIFYVVD 541
RK++++TNI ETS+TID I YV+D
Sbjct: 803 RKIILSTNICETSITIDNIVYVID 826
Score = 51 (23.0 bits), Expect = 4.2e-23, Sum P(4) = 4.2e-23
Identities = 16/53 (30%), Positives = 26/53 (49%)
Query: 73 DHITLLAVYNSWRNNKFSNAWCYENFVQIRTLKRAQDVRKQLLGIMDRHKLDV 125
D +L Y RN K N E +++ LK+ D R++ L ++ KLD+
Sbjct: 40 DSYSLYLEYQKGRNKKLKNN---EEYIEY--LKK--DARRKYLKEREKEKLDI 85
>UNIPROTKB|C9JR60 [details] [associations]
symbol:DHX40 "Probable ATP-dependent RNA helicase DHX40"
species:9606 "Homo sapiens" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408
PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001 PROSITE:PS51192
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026 HOGENOM:HOG000175261
RefSeq:NP_001159773.1 UniGene:Hs.29403 GeneID:79665 KEGG:hsa:79665
CTD:79665 HGNC:HGNC:18018 ChiTaRS:DHX40 OrthoDB:EOG48PMJH
EMBL:AC091271 EMBL:AC004167 IPI:IPI00952676
ProteinModelPortal:C9JR60 STRING:C9JR60 Ensembl:ENST00000425628
ArrayExpress:C9JR60 Uniprot:C9JR60
Length = 702
Score = 258 (95.9 bits), Expect = 6.9e-19, P = 6.9e-19
Identities = 74/256 (28%), Positives = 126/256 (49%)
Query: 12 MAEFPLEPNLSKMLIMSVHLQCSDEVLTIVSMLSVQNVFYRPXX--XXXXXXXXXXXFNQ 69
M EFPL P+L+ +I + L C D +L I +MLSV+NVF RP
Sbjct: 409 MVEFPLPPHLTCAVIKAASLDCEDLLLPIAAMLSVENVFIRPVDPEYQKEAEQRHRELAA 468
Query: 70 MEG---DHITLLAVYNSWRNNKFSNAWCYENFVQIRTLKRAQDVRKQLLGIMDRHKL--- 123
G D TL ++ +++ +WC ++++ R L A V QL ++ + K
Sbjct: 469 KAGGFNDFATLAVIFEQCKSSGAPASWCQKHWIHWRCLFSAFRVEAQLRELIRKLKQQSD 528
Query: 124 ---DVVSAGKNTVRVQKAVCSGFFRNAAKKDPQEGYRTLVD-SQVVYIHPSSALFNRQP- 178
+ K+ V +++ +C+G+F+N A++ + T+ V+IHPSSAL ++
Sbjct: 529 FPKETFEGPKHEV-LRRCLCAGYFKNVARRSVGRTFCTMDGRGSPVHIHPSSALHEQETK 587
Query: 179 -EWVIYHELVQTTKEYMREVTSIDPKWLVEFAPAFFKFSDPTKLSKFKKNQRLEPLQR-T 236
EW+I+HE++ TTK Y R V I +W+ + P +F+ S ++ R + +R T
Sbjct: 588 LEWIIFHEVLVTTKVYARIVCPIRYEWVRDLLPKLHEFNAHDLSSVARREVREDARRRWT 647
Query: 237 NRISFPPGLLKQAVKK 252
N+ + LK + K
Sbjct: 648 NKENVKQ--LKDGISK 661
Score = 177 (67.4 bits), Expect = 4.7e-23, Sum P(2) = 4.7e-23
Identities = 48/128 (37%), Positives = 71/128 (55%)
Query: 217 DPTKLSKFKKNQRLEPLQRTNRISFPPGLLKQAVK-KRPE----IKLIVTSATLDAVKFS 271
DP L+KF E +RT GLLK+ + K P +K++V SAT++ K S
Sbjct: 84 DPN-LTKFSVIILDEAHERTLTTDILFGLLKKLFQEKSPNRKEHLKVVVMSATMELAKLS 142
Query: 272 SYFFEAPIFTIPGRTFPVE-----VLYTKEPE-TDYLDASLITVMQIHLREPPGDVLLFL 325
++F PIF IPGR +PV ++ ++ E T Y+ A + M IHL E GD+L+FL
Sbjct: 143 AFFGNCPIFDIPGRLYPVREKFCNLIGPRDRENTAYIQAIVKVTMDIHLNEMAGDILVFL 202
Query: 326 TGKLDVRK 333
TG+ ++ K
Sbjct: 203 TGQFEIEK 210
Score = 172 (65.6 bits), Expect = 4.7e-23, Sum P(2) = 4.7e-23
Identities = 39/79 (49%), Positives = 54/79 (68%)
Query: 470 EIDTACEILYERMKSLGPD--VPE-----LIILPVYSALPSEMQTRIFEAAPPGSRKVVI 522
EI+ +CE+L++ +S+ D V + L+ILP Y ++ ++ Q RIF PPG RK VI
Sbjct: 207 EIEKSCELLFQMAESVDYDYDVQDTTLDGLLILPCYGSMTTDQQRRIFLPPPPGIRKCVI 266
Query: 523 ATNIAETSLTIDGIFYVVD 541
+TNI+ TSLTIDGI YVVD
Sbjct: 267 STNISATSLTIDGIRYVVD 285
Score = 148 (57.2 bits), Expect = 1.5e-20, Sum P(2) = 1.5e-20
Identities = 29/85 (34%), Positives = 52/85 (61%)
Query: 356 VQKAVCSGFFRNAAKKDPQEGYRTLVD-SQVVYIHPSSALFNRQP--EWVIYHELVQTTK 412
+++ +C+G+F+N A++ + T+ V+IHPSSAL ++ EW+I+HE++ TTK
Sbjct: 542 LRRCLCAGYFKNVARRSVGRTFCTMDGRGSPVHIHPSSALHEQETKLEWIIFHEVLVTTK 601
Query: 413 EYMREVTSIDPKWLVEFAPAFFKFS 437
Y R V I +W+ + P +F+
Sbjct: 602 VYARIVCPIRYEWVRDLLPKLHEFN 626
>DICTYBASE|DDB_G0268212 [details] [associations]
symbol:DDB_G0268212 "putative DEAD/DEAH box helicase"
species:44689 "Dictyostelium discoideum" [GO:0004386 "helicase
activity" evidence=IEA] [GO:0008150 "biological_process"
evidence=ND] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0000166 "nucleotide
binding" evidence=IEA] InterPro:IPR007502 Pfam:PF04408
SMART:SM00847 dictyBase:DDB_G0268212 GO:GO:0005524
EMBL:AAFI02000003 GO:GO:0004386 InterPro:IPR014001 PROSITE:PS51192
eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717 RefSeq:XP_647649.1
ProteinModelPortal:Q55F84 IntAct:Q55F84 EnsemblProtists:DDB0233906
GeneID:8616466 KEGG:ddi:DDB_G0268212 Uniprot:Q55F84
Length = 455
Score = 289 (106.8 bits), Expect = 5.1e-23, P = 5.1e-23
Identities = 64/203 (31%), Positives = 109/203 (53%)
Query: 12 MAEFPLEPNLSKMLIMSVHLQCSDEVLTIVSMLSVQNVFYRPXXXXXXXXXXXXXFNQME 71
M PLEP SK++I S L CS+++L I+SML + N +
Sbjct: 256 MVGLPLEPIYSKVIIESEKLGCSEQILNIISMLLINN----KNDLFINSKLSSSALIDSQ 311
Query: 72 GDHITLLAVYNSWRNNKFSNAWCYENFVQIRTLKRAQDVRKQLLGIMDRHKLDVVSAG-- 129
DH+TLL VYNS+ +NK S WC +N + +T++ Q ++ QLL + + + ++S
Sbjct: 312 SDHLTLLNVYNSFISNKCSPIWCNDNQINFQTIQTVQQIKNQLLNCLTKVSVKLLSCNDD 371
Query: 130 -----KNTVRVQKAVCSGFFRNAAKKDPQEGYRTLVDS-QVVYIHPSSALFNRQPEWVIY 183
++T ++K+ SGFF N AK Y T+V+ + V +HP+S++ ++V++
Sbjct: 372 GSSSKQSTDHIKKSFLSGFFNNVAKSTTDNSYETIVEPIRKVLLHPTSSVVPESNQFVLF 431
Query: 184 HELVQTTK-EYMREVTSIDPKWL 205
E + + EY+++V+ ID WL
Sbjct: 432 GETFKIDRSEYIKDVSVIDQSWL 454
Score = 131 (51.2 bits), Expect = 1.0e-05, Sum P(2) = 1.0e-05
Identities = 27/84 (32%), Positives = 50/84 (59%)
Query: 345 DVVSAGKNTVRVQKAVCSGFFRNAAKKDPQEGYRTLVDS-QVVYIHPSSALFNRQPEWVI 403
D S+ ++T ++K+ SGFF N AK Y T+V+ + V +HP+S++ ++V+
Sbjct: 371 DGSSSKQSTDHIKKSFLSGFFNNVAKSTTDNSYETIVEPIRKVLLHPTSSVVPESNQFVL 430
Query: 404 YHELVQTTK-EYMREVTSIDPKWL 426
+ E + + EY+++V+ ID WL
Sbjct: 431 FGETFKIDRSEYIKDVSVIDQSWL 454
Score = 48 (22.0 bits), Expect = 1.0e-05, Sum P(2) = 1.0e-05
Identities = 10/38 (26%), Positives = 23/38 (60%)
Query: 246 LKQAVKKRPEIKLIV-TSATLDAVKFSSYFFEAPIFTI 282
L+ + KRP++K+++ TS +A + ++F + T+
Sbjct: 135 LEISTTKRPDLKIVILTSTNSNANEIKNFFGSDNVSTL 172
Score = 40 (19.1 bits), Expect = 6.9e-05, Sum P(2) = 6.9e-05
Identities = 14/47 (29%), Positives = 24/47 (51%)
Query: 287 FPVEVLYTKEPETDYL--DASLITVMQIHLREPPGDVLLFLTGKLDV 331
F + L +E D L + S++ + Q+ R D+LL L KL++
Sbjct: 91 FITDGLLVREMIVDPLLNNYSILIIDQVDERSLSTDLLLALLKKLEI 137
>UNIPROTKB|Q8IX18 [details] [associations]
symbol:DHX40 "Probable ATP-dependent RNA helicase DHX40"
species:9606 "Homo sapiens" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408
PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 HOVERGEN:HBG039428 EMBL:AF461690 EMBL:AF260270
EMBL:AK025713 EMBL:AK095681 EMBL:BC024187 EMBL:AL832510
EMBL:AF319521 IPI:IPI00410110 IPI:IPI00797226 IPI:IPI01010408
RefSeq:NP_001159773.1 RefSeq:NP_078888.4 UniGene:Hs.29403
ProteinModelPortal:Q8IX18 SMR:Q8IX18 IntAct:Q8IX18 STRING:Q8IX18
PhosphoSite:Q8IX18 DMDM:116247771 PaxDb:Q8IX18 PRIDE:Q8IX18
DNASU:79665 Ensembl:ENST00000251241 GeneID:79665 KEGG:hsa:79665
UCSC:uc002ixn.2 CTD:79665 GeneCards:GC17P057642 HGNC:HGNC:18018
HPA:HPA044350 MIM:607570 neXtProt:NX_Q8IX18 PharmGKB:PA27227
InParanoid:Q8IX18 OMA:LYGSMPT PhylomeDB:Q8IX18 ChiTaRS:DHX40
GenomeRNAi:79665 NextBio:68866 ArrayExpress:Q8IX18 Bgee:Q8IX18
CleanEx:HS_DHX40 Genevestigator:Q8IX18 GermOnline:ENSG00000108406
Uniprot:Q8IX18
Length = 779
Score = 258 (95.9 bits), Expect = 8.5e-19, P = 8.5e-19
Identities = 74/256 (28%), Positives = 126/256 (49%)
Query: 12 MAEFPLEPNLSKMLIMSVHLQCSDEVLTIVSMLSVQNVFYRPXX--XXXXXXXXXXXFNQ 69
M EFPL P+L+ +I + L C D +L I +MLSV+NVF RP
Sbjct: 486 MVEFPLPPHLTCAVIKAASLDCEDLLLPIAAMLSVENVFIRPVDPEYQKEAEQRHRELAA 545
Query: 70 MEG---DHITLLAVYNSWRNNKFSNAWCYENFVQIRTLKRAQDVRKQLLGIMDRHKL--- 123
G D TL ++ +++ +WC ++++ R L A V QL ++ + K
Sbjct: 546 KAGGFNDFATLAVIFEQCKSSGAPASWCQKHWIHWRCLFSAFRVEAQLRELIRKLKQQSD 605
Query: 124 ---DVVSAGKNTVRVQKAVCSGFFRNAAKKDPQEGYRTLVD-SQVVYIHPSSALFNRQP- 178
+ K+ V +++ +C+G+F+N A++ + T+ V+IHPSSAL ++
Sbjct: 606 FPKETFEGPKHEV-LRRCLCAGYFKNVARRSVGRTFCTMDGRGSPVHIHPSSALHEQETK 664
Query: 179 -EWVIYHELVQTTKEYMREVTSIDPKWLVEFAPAFFKFSDPTKLSKFKKNQRLEPLQR-T 236
EW+I+HE++ TTK Y R V I +W+ + P +F+ S ++ R + +R T
Sbjct: 665 LEWIIFHEVLVTTKVYARIVCPIRYEWVRDLLPKLHEFNAHDLSSVARREVREDARRRWT 724
Query: 237 NRISFPPGLLKQAVKK 252
N+ + LK + K
Sbjct: 725 NKENVKQ--LKDGISK 738
Score = 177 (67.4 bits), Expect = 6.4e-23, Sum P(2) = 6.4e-23
Identities = 48/128 (37%), Positives = 71/128 (55%)
Query: 217 DPTKLSKFKKNQRLEPLQRTNRISFPPGLLKQAVK-KRPE----IKLIVTSATLDAVKFS 271
DP L+KF E +RT GLLK+ + K P +K++V SAT++ K S
Sbjct: 161 DPN-LTKFSVIILDEAHERTLTTDILFGLLKKLFQEKSPNRKEHLKVVVMSATMELAKLS 219
Query: 272 SYFFEAPIFTIPGRTFPVE-----VLYTKEPE-TDYLDASLITVMQIHLREPPGDVLLFL 325
++F PIF IPGR +PV ++ ++ E T Y+ A + M IHL E GD+L+FL
Sbjct: 220 AFFGNCPIFDIPGRLYPVREKFCNLIGPRDRENTAYIQAIVKVTMDIHLNEMAGDILVFL 279
Query: 326 TGKLDVRK 333
TG+ ++ K
Sbjct: 280 TGQFEIEK 287
Score = 172 (65.6 bits), Expect = 6.4e-23, Sum P(2) = 6.4e-23
Identities = 39/79 (49%), Positives = 54/79 (68%)
Query: 470 EIDTACEILYERMKSLGPD--VPE-----LIILPVYSALPSEMQTRIFEAAPPGSRKVVI 522
EI+ +CE+L++ +S+ D V + L+ILP Y ++ ++ Q RIF PPG RK VI
Sbjct: 284 EIEKSCELLFQMAESVDYDYDVQDTTLDGLLILPCYGSMTTDQQRRIFLPPPPGIRKCVI 343
Query: 523 ATNIAETSLTIDGIFYVVD 541
+TNI+ TSLTIDGI YVVD
Sbjct: 344 STNISATSLTIDGIRYVVD 362
Score = 148 (57.2 bits), Expect = 2.1e-20, Sum P(2) = 2.1e-20
Identities = 29/85 (34%), Positives = 52/85 (61%)
Query: 356 VQKAVCSGFFRNAAKKDPQEGYRTLVD-SQVVYIHPSSALFNRQP--EWVIYHELVQTTK 412
+++ +C+G+F+N A++ + T+ V+IHPSSAL ++ EW+I+HE++ TTK
Sbjct: 619 LRRCLCAGYFKNVARRSVGRTFCTMDGRGSPVHIHPSSALHEQETKLEWIIFHEVLVTTK 678
Query: 413 EYMREVTSIDPKWLVEFAPAFFKFS 437
Y R V I +W+ + P +F+
Sbjct: 679 VYARIVCPIRYEWVRDLLPKLHEFN 703
>UNIPROTKB|Q08DS9 [details] [associations]
symbol:DHX40 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0003676
"nucleic acid binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026 HOGENOM:HOG000175261
HOVERGEN:HBG039428 GeneTree:ENSGT00700000104421 CTD:79665
OMA:LYGSMPT EMBL:DAAA02048338 EMBL:BC123581 IPI:IPI00715479
RefSeq:NP_001070365.1 UniGene:Bt.63706 Ensembl:ENSBTAT00000023753
GeneID:533484 KEGG:bta:533484 InParanoid:Q08DS9 NextBio:20876051
Uniprot:Q08DS9
Length = 779
Score = 257 (95.5 bits), Expect = 1.1e-18, P = 1.1e-18
Identities = 71/242 (29%), Positives = 121/242 (50%)
Query: 12 MAEFPLEPNLSKMLIMSVHLQCSDEVLTIVSMLSVQNVFYRPXX--XXXXXXXXXXXFNQ 69
M EFPL P+L+ +I + L C D +L I +MLSV+NVF RP
Sbjct: 486 MVEFPLPPHLTCAVIKAASLDCEDLLLPIAAMLSVENVFIRPVDPEYQKEAEQRHRELAA 545
Query: 70 MEG---DHITLLAVYNSWRNNKFSNAWCYENFVQIRTLKRAQDVRKQLLGIMDRHKL--- 123
G D TL ++ +++ +WC ++++ R L A V QL ++ + K
Sbjct: 546 KAGGFNDFATLAVIFEQCKSSGAPASWCQKHWIHWRCLFSAFRVEAQLRELIRKLKQQSD 605
Query: 124 ---DVVSAGKNTVRVQKAVCSGFFRNAAKKDPQEGYRTLVD-SQVVYIHPSSALFNRQP- 178
+ K+ V +++ +C+G+F+N A++ + T+ V+IHPSSAL ++
Sbjct: 606 FPRETFEGPKHEV-LRRCLCAGYFKNVARRSVGRTFCTMDGRGSPVHIHPSSALHEQETK 664
Query: 179 -EWVIYHELVQTTKEYMREVTSIDPKWLVEFAPAFFKFSDPTKLSKFKKNQRLEPLQR-T 236
EW+I+HE++ TTK Y R V I +W+ + P +F+ S ++ R + +R T
Sbjct: 665 LEWIIFHEVLVTTKVYARIVCPIRYEWVRDLLPKLHEFNAHDLSSVARREVREDARRRWT 724
Query: 237 NR 238
N+
Sbjct: 725 NK 726
Score = 177 (67.4 bits), Expect = 6.4e-23, Sum P(2) = 6.4e-23
Identities = 48/128 (37%), Positives = 71/128 (55%)
Query: 217 DPTKLSKFKKNQRLEPLQRTNRISFPPGLLKQAVK-KRPE----IKLIVTSATLDAVKFS 271
DP L+KF E +RT GLLK+ + K P +K++V SAT++ K S
Sbjct: 161 DPN-LTKFSVIILDEAHERTLTTDILFGLLKKLFQEKSPNRKEHLKVVVMSATMELAKLS 219
Query: 272 SYFFEAPIFTIPGRTFPVE-----VLYTKEPE-TDYLDASLITVMQIHLREPPGDVLLFL 325
++F PIF IPGR +PV ++ ++ E T Y+ A + M IHL E GD+L+FL
Sbjct: 220 AFFGNCPIFDIPGRLYPVREKFCNLIGPRDRENTAYIQAIVKVTMDIHLNEMAGDILVFL 279
Query: 326 TGKLDVRK 333
TG+ ++ K
Sbjct: 280 TGQFEIEK 287
Score = 172 (65.6 bits), Expect = 6.4e-23, Sum P(2) = 6.4e-23
Identities = 39/79 (49%), Positives = 54/79 (68%)
Query: 470 EIDTACEILYERMKSLGPD--VPE-----LIILPVYSALPSEMQTRIFEAAPPGSRKVVI 522
EI+ +CE+L++ +S+ D V + L+ILP Y ++ ++ Q RIF PPG RK VI
Sbjct: 284 EIEKSCELLFQMAESVDYDYDVQDTTLDGLLILPCYGSMTTDQQRRIFLPPPPGIRKCVI 343
Query: 523 ATNIAETSLTIDGIFYVVD 541
+TNI+ TSLTIDGI YVVD
Sbjct: 344 STNISATSLTIDGIRYVVD 362
Score = 148 (57.2 bits), Expect = 2.1e-20, Sum P(2) = 2.1e-20
Identities = 29/85 (34%), Positives = 52/85 (61%)
Query: 356 VQKAVCSGFFRNAAKKDPQEGYRTLVD-SQVVYIHPSSALFNRQP--EWVIYHELVQTTK 412
+++ +C+G+F+N A++ + T+ V+IHPSSAL ++ EW+I+HE++ TTK
Sbjct: 619 LRRCLCAGYFKNVARRSVGRTFCTMDGRGSPVHIHPSSALHEQETKLEWIIFHEVLVTTK 678
Query: 413 EYMREVTSIDPKWLVEFAPAFFKFS 437
Y R V I +W+ + P +F+
Sbjct: 679 VYARIVCPIRYEWVRDLLPKLHEFN 703
>UNIPROTKB|F1S235 [details] [associations]
symbol:LOC100519272 "Uncharacterized protein" species:9823
"Sus scrofa" [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0003676
"nucleic acid binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
GeneTree:ENSGT00700000104421 OMA:LYGSMPT EMBL:CU694896
RefSeq:XP_003131712.1 Ensembl:ENSSSCT00000019229 GeneID:100519272
KEGG:ssc:100519272 Uniprot:F1S235
Length = 779
Score = 257 (95.5 bits), Expect = 1.1e-18, P = 1.1e-18
Identities = 71/242 (29%), Positives = 121/242 (50%)
Query: 12 MAEFPLEPNLSKMLIMSVHLQCSDEVLTIVSMLSVQNVFYRPXX--XXXXXXXXXXXFNQ 69
M EFPL P+L+ +I + L C D +L I +MLSV+NVF RP
Sbjct: 486 MVEFPLPPHLTCAVIKAASLDCEDLLLPIAAMLSVENVFIRPVDPEYQKEAEQRHRELAA 545
Query: 70 MEG---DHITLLAVYNSWRNNKFSNAWCYENFVQIRTLKRAQDVRKQLLGIMDRHKL--- 123
G D TL ++ +++ +WC ++++ R L A V QL ++ + K
Sbjct: 546 KAGGFNDFATLAVIFEQCKSSGAPASWCQKHWIHWRCLFSAFRVEAQLRELIRKLKQQSD 605
Query: 124 ---DVVSAGKNTVRVQKAVCSGFFRNAAKKDPQEGYRTLVD-SQVVYIHPSSALFNRQP- 178
+ K+ V +++ +C+G+F+N A++ + T+ V+IHPSSAL ++
Sbjct: 606 FPRETFEGPKHEV-LRRCLCAGYFKNVARRSVGRTFCTMDGRGSPVHIHPSSALHEQETK 664
Query: 179 -EWVIYHELVQTTKEYMREVTSIDPKWLVEFAPAFFKFSDPTKLSKFKKNQRLEPLQR-T 236
EW+I+HE++ TTK Y R V I +W+ + P +F+ S ++ R + +R T
Sbjct: 665 LEWIIFHEVLVTTKVYARIVCPIRYEWVRDLLPKLHEFNAHDLSSVARREVREDARRRWT 724
Query: 237 NR 238
N+
Sbjct: 725 NK 726
Score = 177 (67.4 bits), Expect = 6.4e-23, Sum P(2) = 6.4e-23
Identities = 48/128 (37%), Positives = 71/128 (55%)
Query: 217 DPTKLSKFKKNQRLEPLQRTNRISFPPGLLKQAVK-KRPE----IKLIVTSATLDAVKFS 271
DP L+KF E +RT GLLK+ + K P +K++V SAT++ K S
Sbjct: 161 DPN-LTKFSVIILDEAHERTLTTDILFGLLKKLFQEKSPNRKEHLKVVVMSATMELAKLS 219
Query: 272 SYFFEAPIFTIPGRTFPVE-----VLYTKEPE-TDYLDASLITVMQIHLREPPGDVLLFL 325
++F PIF IPGR +PV ++ ++ E T Y+ A + M IHL E GD+L+FL
Sbjct: 220 AFFGNCPIFDIPGRLYPVREKFCNLIGPRDRENTAYIQAIVKVTMDIHLNEMAGDILVFL 279
Query: 326 TGKLDVRK 333
TG+ ++ K
Sbjct: 280 TGQFEIEK 287
Score = 172 (65.6 bits), Expect = 6.4e-23, Sum P(2) = 6.4e-23
Identities = 39/79 (49%), Positives = 54/79 (68%)
Query: 470 EIDTACEILYERMKSLGPD--VPE-----LIILPVYSALPSEMQTRIFEAAPPGSRKVVI 522
EI+ +CE+L++ +S+ D V + L+ILP Y ++ ++ Q RIF PPG RK VI
Sbjct: 284 EIEKSCELLFQMAESVDYDYDVQDTTLDGLLILPCYGSMTTDQQRRIFLPPPPGIRKCVI 343
Query: 523 ATNIAETSLTIDGIFYVVD 541
+TNI+ TSLTIDGI YVVD
Sbjct: 344 STNISATSLTIDGIRYVVD 362
Score = 148 (57.2 bits), Expect = 2.1e-20, Sum P(2) = 2.1e-20
Identities = 29/85 (34%), Positives = 52/85 (61%)
Query: 356 VQKAVCSGFFRNAAKKDPQEGYRTLVD-SQVVYIHPSSALFNRQP--EWVIYHELVQTTK 412
+++ +C+G+F+N A++ + T+ V+IHPSSAL ++ EW+I+HE++ TTK
Sbjct: 619 LRRCLCAGYFKNVARRSVGRTFCTMDGRGSPVHIHPSSALHEQETKLEWIIFHEVLVTTK 678
Query: 413 EYMREVTSIDPKWLVEFAPAFFKFS 437
Y R V I +W+ + P +F+
Sbjct: 679 VYARIVCPIRYEWVRDLLPKLHEFN 703
>RGD|1359618 [details] [associations]
symbol:Dhx40 "DEAH (Asp-Glu-Ala-His) box polypeptide 40"
species:10116 "Rattus norvegicus" [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408
PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
RGD:1359618 GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 HOGENOM:HOG000175261 HOVERGEN:HBG039428
GeneTree:ENSGT00700000104421 CTD:79665 OMA:LYGSMPT
OrthoDB:EOG48PMJH EMBL:BC083821 IPI:IPI00369962
RefSeq:NP_001005873.1 UniGene:Rn.29182 ProteinModelPortal:Q5XI69
PhosphoSite:Q5XI69 Ensembl:ENSRNOT00000006926 GeneID:287595
KEGG:rno:287595 InParanoid:Q5XI69 NextBio:626568
ArrayExpress:Q5XI69 Genevestigator:Q5XI69
GermOnline:ENSRNOG00000004549 Uniprot:Q5XI69
Length = 779
Score = 250 (93.1 bits), Expect = 6.5e-18, P = 6.5e-18
Identities = 72/256 (28%), Positives = 125/256 (48%)
Query: 12 MAEFPLEPNLSKMLIMSVHLQCSDEVLTIVSMLSVQNVFYRPXX--XXXXXXXXXXXFNQ 69
M EFPL P+L+ +I + L C D +L I +MLSV+NVF RP
Sbjct: 486 MVEFPLPPHLTCAVIRAASLDCEDLLLPIAAMLSVENVFIRPVDPEYQKEAEQKHRELAA 545
Query: 70 MEG---DHITLLAVYNSWRNNKFSNAWCYENFVQIRTLKRAQDVRKQLLGIMDRHKL--- 123
G D TL ++ +++ +WC ++++ R L A V QL ++ + K
Sbjct: 546 KAGGFNDFATLAVIFEQCKSSGAPASWCQKHWIHWRCLFSAFRVEAQLRELIRKLKQQSD 605
Query: 124 ---DVVSAGKNTVRVQKAVCSGFFRNAAKKDPQEGYRTLVD-SQVVYIHPSSALFNRQP- 178
+ K+ V +++ +C+G+F+N A++ + T+ V+IHPSSAL ++
Sbjct: 606 FPRETFEGPKHEV-LRRCLCAGYFKNVARRSVGRTFCTMDGRGSPVHIHPSSALHEQETK 664
Query: 179 -EWVIYHELVQTTKEYMREVTSIDPKWLVEFAPAFFKFSDPTKLSKFKKNQRLEPLQR-T 236
EW+I+HE++ TTK Y R V I +W+ + P + + S ++ R + ++ T
Sbjct: 665 LEWIIFHEVLVTTKVYARIVCPIRYEWVRDLLPKLHELNAHDLSSVARREMRDDARRKWT 724
Query: 237 NRISFPPGLLKQAVKK 252
N+ + LK + K
Sbjct: 725 NKENVKQ--LKDGISK 738
Score = 177 (67.4 bits), Expect = 6.4e-23, Sum P(2) = 6.4e-23
Identities = 48/128 (37%), Positives = 71/128 (55%)
Query: 217 DPTKLSKFKKNQRLEPLQRTNRISFPPGLLKQAVK-KRPE----IKLIVTSATLDAVKFS 271
DP L+KF E +RT GLLK+ + K P +K++V SAT++ K S
Sbjct: 161 DPN-LNKFSVIILDEAHERTLTTDILFGLLKKLFQDKSPNRKEHLKVVVMSATMELAKLS 219
Query: 272 SYFFEAPIFTIPGRTFPVE-----VLYTKEPE-TDYLDASLITVMQIHLREPPGDVLLFL 325
++F PIF IPGR +PV ++ ++ E T Y+ A + M IHL E GD+L+FL
Sbjct: 220 AFFGNCPIFDIPGRLYPVREKFCNLIGPRDRENTAYIQAIVKVTMDIHLNEMAGDILVFL 279
Query: 326 TGKLDVRK 333
TG+ ++ K
Sbjct: 280 TGQFEIEK 287
Score = 172 (65.6 bits), Expect = 6.4e-23, Sum P(2) = 6.4e-23
Identities = 39/79 (49%), Positives = 54/79 (68%)
Query: 470 EIDTACEILYERMKSLGPD--VPE-----LIILPVYSALPSEMQTRIFEAAPPGSRKVVI 522
EI+ +CE+L++ +S+ D V + L+ILP Y ++ ++ Q RIF PPG RK VI
Sbjct: 284 EIEKSCELLFQMAESVDYDYDVQDTTLDGLLILPCYGSMTTDQQRRIFLPPPPGIRKCVI 343
Query: 523 ATNIAETSLTIDGIFYVVD 541
+TNI+ TSLTIDGI YVVD
Sbjct: 344 STNISATSLTIDGIRYVVD 362
Score = 142 (55.0 bits), Expect = 8.7e-20, Sum P(2) = 8.7e-20
Identities = 28/79 (35%), Positives = 49/79 (62%)
Query: 356 VQKAVCSGFFRNAAKKDPQEGYRTLVD-SQVVYIHPSSALFNRQP--EWVIYHELVQTTK 412
+++ +C+G+F+N A++ + T+ V+IHPSSAL ++ EW+I+HE++ TTK
Sbjct: 619 LRRCLCAGYFKNVARRSVGRTFCTMDGRGSPVHIHPSSALHEQETKLEWIIFHEVLVTTK 678
Query: 413 EYMREVTSIDPKWLVEFAP 431
Y R V I +W+ + P
Sbjct: 679 VYARIVCPIRYEWVRDLLP 697
Score = 38 (18.4 bits), Expect = 5.3e-09, Sum P(2) = 5.3e-09
Identities = 11/32 (34%), Positives = 16/32 (50%)
Query: 475 CEILYERMKSLGPDVPELIILPVYSALPSEMQ 506
C I YE ++ L P + EL + S EM+
Sbjct: 685 CPIRYEWVRDLLPKLHELNAHDLSSVARREMR 716
>UNIPROTKB|E2RPC8 [details] [associations]
symbol:DHX40 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
GeneTree:ENSGT00700000104421 EMBL:AAEX03006584 EMBL:AAEX03006585
Ensembl:ENSCAFT00000027962 Uniprot:E2RPC8
Length = 781
Score = 236 (88.1 bits), Expect = 2.3e-16, P = 2.3e-16
Identities = 67/242 (27%), Positives = 118/242 (48%)
Query: 12 MAEFPLEPNLSKMLIMSVHLQCSDEVLTIVSMLSVQNVFYRPXX--XXXXXXXXXXXFNQ 69
M EFPL P+L+ +I + L C D +L I +MLSV+NVF RP
Sbjct: 486 MVEFPLPPHLTCAVIKAASLDCEDLLLPIAAMLSVENVFIRPVDPEYQKEAEQRHRELAA 545
Query: 70 MEG---DHITLLAVYNSWRNNKFSNAWCYENFVQIRTLKRAQDVRKQLLGIMDRHKL--- 123
G D TL ++ +++ +WC ++++ R L A V QL ++ + K
Sbjct: 546 KAGGFNDFATLAVIFEQCKSSGAPASWCQKHWIHWRCLFSAFRVEAQLRELIRKLKQQSD 605
Query: 124 ---DVVSAGKNTVRVQKAVCSGFFRNAAKKDPQEGYRTLVD-SQVVYIHPSSALFNRQP- 178
+ K+ V +++ +C+G+F+N A++ + T+ V+IH + L ++
Sbjct: 606 FPRETFEGPKHEV-LRRCLCAGYFKNVARRSVGRTFCTMDGRGSPVHIHQNCKLHEQETK 664
Query: 179 -EWVIYHELVQTTKEYMREVTSIDPKWLVEFAPAFFKFSDPTKLSKFKKNQRLEPLQR-T 236
EW+I+HE++ TTK Y R V I +W+ + P +F+ S ++ R + +R T
Sbjct: 665 LEWIIFHEVLVTTKVYARIVCPIRYEWVRDLLPKLHEFNAHDLSSVARREVREDARRRWT 724
Query: 237 NR 238
N+
Sbjct: 725 NK 726
Score = 177 (67.4 bits), Expect = 6.5e-23, Sum P(2) = 6.5e-23
Identities = 48/128 (37%), Positives = 71/128 (55%)
Query: 217 DPTKLSKFKKNQRLEPLQRTNRISFPPGLLKQAVK-KRPE----IKLIVTSATLDAVKFS 271
DP L+KF E +RT GLLK+ + K P +K++V SAT++ K S
Sbjct: 161 DPN-LTKFSVIILDEAHERTLTTDILFGLLKKLFQEKSPNRKEHLKVVVMSATMELAKLS 219
Query: 272 SYFFEAPIFTIPGRTFPVE-----VLYTKEPE-TDYLDASLITVMQIHLREPPGDVLLFL 325
++F PIF IPGR +PV ++ ++ E T Y+ A + M IHL E GD+L+FL
Sbjct: 220 AFFGNCPIFDIPGRLYPVREKFCNLIGPRDRENTAYIQAIVKVTMDIHLNEMAGDILVFL 279
Query: 326 TGKLDVRK 333
TG+ ++ K
Sbjct: 280 TGQFEIEK 287
Score = 172 (65.6 bits), Expect = 6.5e-23, Sum P(2) = 6.5e-23
Identities = 39/79 (49%), Positives = 54/79 (68%)
Query: 470 EIDTACEILYERMKSLGPD--VPE-----LIILPVYSALPSEMQTRIFEAAPPGSRKVVI 522
EI+ +CE+L++ +S+ D V + L+ILP Y ++ ++ Q RIF PPG RK VI
Sbjct: 284 EIEKSCELLFQMAESVDYDYDVQDTTLDGLLILPCYGSMTTDQQRRIFLPPPPGIRKCVI 343
Query: 523 ATNIAETSLTIDGIFYVVD 541
+TNI+ TSLTIDGI YVVD
Sbjct: 344 STNISATSLTIDGIRYVVD 362
Score = 127 (49.8 bits), Expect = 3.2e-18, Sum P(2) = 3.2e-18
Identities = 25/85 (29%), Positives = 49/85 (57%)
Query: 356 VQKAVCSGFFRNAAKKDPQEGYRTLVD-SQVVYIHPSSALFNRQP--EWVIYHELVQTTK 412
+++ +C+G+F+N A++ + T+ V+IH + L ++ EW+I+HE++ TTK
Sbjct: 619 LRRCLCAGYFKNVARRSVGRTFCTMDGRGSPVHIHQNCKLHEQETKLEWIIFHEVLVTTK 678
Query: 413 EYMREVTSIDPKWLVEFAPAFFKFS 437
Y R V I +W+ + P +F+
Sbjct: 679 VYARIVCPIRYEWVRDLLPKLHEFN 703
>UNIPROTKB|J9NVQ3 [details] [associations]
symbol:DHX40 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
GeneTree:ENSGT00700000104421 OMA:LYGSMPT EMBL:AAEX03006584
EMBL:AAEX03006585 Ensembl:ENSCAFT00000048714 Uniprot:J9NVQ3
Length = 857
Score = 257 (95.5 bits), Expect = 1.3e-18, P = 1.3e-18
Identities = 71/242 (29%), Positives = 121/242 (50%)
Query: 12 MAEFPLEPNLSKMLIMSVHLQCSDEVLTIVSMLSVQNVFYRPXX--XXXXXXXXXXXFNQ 69
M EFPL P+L+ +I + L C D +L I +MLSV+NVF RP
Sbjct: 564 MVEFPLPPHLTCAVIKAASLDCEDLLLPIAAMLSVENVFIRPVDPEYQKEAEQRHRELAA 623
Query: 70 MEG---DHITLLAVYNSWRNNKFSNAWCYENFVQIRTLKRAQDVRKQLLGIMDRHKL--- 123
G D TL ++ +++ +WC ++++ R L A V QL ++ + K
Sbjct: 624 KAGGFNDFATLAVIFEQCKSSGAPASWCQKHWIHWRCLFSAFRVEAQLRELIRKLKQQSD 683
Query: 124 ---DVVSAGKNTVRVQKAVCSGFFRNAAKKDPQEGYRTLVD-SQVVYIHPSSALFNRQP- 178
+ K+ V +++ +C+G+F+N A++ + T+ V+IHPSSAL ++
Sbjct: 684 FPRETFEGPKHEV-LRRCLCAGYFKNVARRSVGRTFCTMDGRGSPVHIHPSSALHEQETK 742
Query: 179 -EWVIYHELVQTTKEYMREVTSIDPKWLVEFAPAFFKFSDPTKLSKFKKNQRLEPLQR-T 236
EW+I+HE++ TTK Y R V I +W+ + P +F+ S ++ R + +R T
Sbjct: 743 LEWIIFHEVLVTTKVYARIVCPIRYEWVRDLLPKLHEFNAHDLSSVARREVREDARRRWT 802
Query: 237 NR 238
N+
Sbjct: 803 NK 804
Score = 177 (67.4 bits), Expect = 8.4e-23, Sum P(2) = 8.4e-23
Identities = 48/128 (37%), Positives = 71/128 (55%)
Query: 217 DPTKLSKFKKNQRLEPLQRTNRISFPPGLLKQAVK-KRPE----IKLIVTSATLDAVKFS 271
DP L+KF E +RT GLLK+ + K P +K++V SAT++ K S
Sbjct: 239 DPN-LTKFSVIILDEAHERTLTTDILFGLLKKLFQEKSPNRKEHLKVVVMSATMELAKLS 297
Query: 272 SYFFEAPIFTIPGRTFPVE-----VLYTKEPE-TDYLDASLITVMQIHLREPPGDVLLFL 325
++F PIF IPGR +PV ++ ++ E T Y+ A + M IHL E GD+L+FL
Sbjct: 298 AFFGNCPIFDIPGRLYPVREKFCNLIGPRDRENTAYIQAIVKVTMDIHLNEMAGDILVFL 357
Query: 326 TGKLDVRK 333
TG+ ++ K
Sbjct: 358 TGQFEIEK 365
Score = 172 (65.6 bits), Expect = 8.4e-23, Sum P(2) = 8.4e-23
Identities = 39/79 (49%), Positives = 54/79 (68%)
Query: 470 EIDTACEILYERMKSLGPD--VPE-----LIILPVYSALPSEMQTRIFEAAPPGSRKVVI 522
EI+ +CE+L++ +S+ D V + L+ILP Y ++ ++ Q RIF PPG RK VI
Sbjct: 362 EIEKSCELLFQMAESVDYDYDVQDTTLDGLLILPCYGSMTTDQQRRIFLPPPPGIRKCVI 421
Query: 523 ATNIAETSLTIDGIFYVVD 541
+TNI+ TSLTIDGI YVVD
Sbjct: 422 STNISATSLTIDGIRYVVD 440
Score = 148 (57.2 bits), Expect = 2.7e-20, Sum P(2) = 2.7e-20
Identities = 29/85 (34%), Positives = 52/85 (61%)
Query: 356 VQKAVCSGFFRNAAKKDPQEGYRTLVD-SQVVYIHPSSALFNRQP--EWVIYHELVQTTK 412
+++ +C+G+F+N A++ + T+ V+IHPSSAL ++ EW+I+HE++ TTK
Sbjct: 697 LRRCLCAGYFKNVARRSVGRTFCTMDGRGSPVHIHPSSALHEQETKLEWIIFHEVLVTTK 756
Query: 413 EYMREVTSIDPKWLVEFAPAFFKFS 437
Y R V I +W+ + P +F+
Sbjct: 757 VYARIVCPIRYEWVRDLLPKLHEFN 781
>ZFIN|ZDB-GENE-080507-1 [details] [associations]
symbol:dhx40 "DEAH (Asp-Glu-Ala-His) box polypeptide
40" species:7955 "Danio rerio" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408
PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
ZFIN:ZDB-GENE-080507-1 GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 GeneTree:ENSGT00700000104421
EMBL:CR848791 EMBL:CU861501 IPI:IPI00507978
Ensembl:ENSDART00000101707 Uniprot:E7F7R7
Length = 734
Score = 277 (102.6 bits), Expect = 5.9e-21, P = 5.9e-21
Identities = 72/237 (30%), Positives = 120/237 (50%)
Query: 6 VTPISQ-MAEFPLEPNLSKMLIMSVHLQCSDEVLTIVSMLSVQNVFYRPXX-----XXXX 59
VT + + M EFPL PNL++ L+ + L C D +L + +MLSV+N+F RP
Sbjct: 444 VTKLGRLMVEFPLPPNLTRALLKAAALGCEDIMLPVAAMLSVENIFIRPGKPEKQKEAEV 503
Query: 60 XXXXXXXFNQMEGDHITLLAVYNSWRNNKFSNAWCYENFVQIRTLKRAQDVRKQLLGIMD 119
+ D + LL V+ R ++ +AWC EN++ R +K A V QL I+
Sbjct: 504 RHKEIAACSGGSNDFLMLLCVFEKCRASENPSAWCKENWIHWRAVKSAFSVETQLREILL 563
Query: 120 RHKL--DVVSA---GKNTVRVQKAVCSGFFRNAAKKDPQEGYRTLVD-SQVVYIHPSSAL 173
R K D G + +++ +C G+F N A++ + + T+ V IHPSS L
Sbjct: 564 RLKQQKDFPHERFEGSRSELLRQCLCLGYFTNVARRSIGKSFCTMDGHGSSVLIHPSSCL 623
Query: 174 FNR--QPEWVIYHELVQTTKEYMREVTSIDPKWLVEFAPAFFKFSDPTKLSKFKKNQ 228
F + Q +W+I+H+++ T++ Y+R V I W+ + P + D +LS + +
Sbjct: 624 FGQELQLDWIIFHDVLVTSRVYVRTVCPIRYDWVKDLLPKLHEI-DVYELSSVAREE 679
Score = 179 (68.1 bits), Expect = 8.5e-23, Sum P(2) = 8.5e-23
Identities = 39/81 (48%), Positives = 57/81 (70%)
Query: 468 REEIDTACEILYERMKSLGP--DVPE-----LIILPVYSALPSEMQTRIFEAAPPGSRKV 520
+ EI+ AC++L+E+ + L DV + L+IL +Y ++P++ Q +IF+ AP G RK
Sbjct: 247 QSEIEKACDLLFEKAEILDYRYDVHDRSVDGLLILSLYGSMPTDQQRQIFQPAPKGVRKC 306
Query: 521 VIATNIAETSLTIDGIFYVVD 541
V+ATNIA TSLTIDGI Y+VD
Sbjct: 307 VVATNIAATSLTIDGIRYIVD 327
Score = 168 (64.2 bits), Expect = 8.5e-23, Sum P(2) = 8.5e-23
Identities = 35/95 (36%), Positives = 58/95 (61%)
Query: 245 LLKQAVKKRPEIKLIVTSATLDAVKFSSYFFEAPIFTIPGRTFPVEVLYT-----KEPET 299
LLK + + +K++V SATL+ K SS++ P+FTIPGRT+PV+ + K+ E+
Sbjct: 158 LLKGSRGNKTPLKVVVMSATLETEKLSSFYGNCPVFTIPGRTYPVKETFCNLIGPKDKES 217
Query: 300 D-YLDASLITVMQIHLREPPGDVLLFLTGKLDVRK 333
Y+ + + +H E GD+L+FLTG+ ++ K
Sbjct: 218 SVYVKEVVKMTLDVHTNEAAGDILVFLTGQSEIEK 252
Score = 143 (55.4 bits), Expect = 5.6e-19, Sum P(2) = 5.6e-19
Identities = 35/135 (25%), Positives = 70/135 (51%)
Query: 350 GKNTVRVQKAVCSGFFRNAAKKDPQEGYRTLVD-SQVVYIHPSSALFNR--QPEWVIYHE 406
G + +++ +C G+F N A++ + + T+ V IHPSS LF + Q +W+I+H+
Sbjct: 578 GSRSELLRQCLCLGYFTNVARRSIGKSFCTMDGHGSSVLIHPSSCLFGQELQLDWIIFHD 637
Query: 407 LVQTTKEYMREVTSIDPKWLVEFAPAFFKFSDPTKLSKFKKNQRLEPLYNKYEEPNAWRI 466
++ T++ Y+R V I W+ + P + D +LS + + + ++E+ A +
Sbjct: 638 VLVTSRVYVRTVCPIRYDWVKDLLPKLHEI-DVYELSSVAREEVTDEEMVQWEKKEAAKR 696
Query: 467 SREEIDTACEILYER 481
E + A + L +R
Sbjct: 697 QAEAREDAAKKLEKR 711
Score = 49 (22.3 bits), Expect = 3.2e-09, Sum P(2) = 3.2e-09
Identities = 12/39 (30%), Positives = 20/39 (51%)
Query: 467 SREEIDTACEILYERMKSLGPDVPELIILPVYSALPSEM 505
SR + T C I Y+ +K L P + E+ + + S E+
Sbjct: 642 SRVYVRTVCPIRYDWVKDLLPKLHEIDVYELSSVAREEV 680
>UNIPROTKB|I3LG93 [details] [associations]
symbol:DQX1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0004386 "helicase activity" evidence=IEA]
InterPro:IPR007502 Pfam:PF04408 SMART:SM00847 GO:GO:0004386
InterPro:IPR011709 Pfam:PF07717 GeneTree:ENSGT00650000093246
Ensembl:ENSSSCT00000026262 OMA:IRTVTHI Uniprot:I3LG93
Length = 278
Score = 261 (96.9 bits), Expect = 9.3e-22, P = 9.3e-22
Identities = 70/232 (30%), Positives = 109/232 (46%)
Query: 12 MAEFPLEPNLSKMLIMSVHLQCSDEVLTIVSMLSVQNVFYRPXXXXXXXXXXXXXFNQME 71
++EFPL P L+K L+ S C DE+LT+ +ML+ F RP ++
Sbjct: 26 LSEFPLAPELAKALLASCEFNCVDEMLTLAAMLTAAPGFTRPPLCAEEAALRRA-LEHVD 84
Query: 72 GDHITLLAVYNSWRNNKFSNAWCYENFVQIRTLKRAQDVRKQLLGIMDRHKLDV----VS 127
GDH +L+ VY ++ + AWC + L +A +R +LL +M R +L +
Sbjct: 85 GDHSSLIQVYEAFIQSGADEAWCQARGLNWAALCQACKLRGELLELMQRIELPLSPPAFG 144
Query: 128 AGKNTVRVQKAVCSGFFRNAAKKDPQEG-YRTLVDSQVVYIHPSSALFNRQ-----PEWV 181
+ +N +QKA+ SG+F A+ G Y L V + P NR+ P WV
Sbjct: 145 SEQNRRDLQKALVSGYFLKVARDTDGTGNYLLLTHKHVAQLSPYCCYRNRRAPARPPPWV 204
Query: 182 IYHELVQTTKEYMREVTSIDPKWLVEFAPAFFKFSDPTKLSKFKKNQRLEPL 233
+YH + + V+ I P+ LVE AP +F + P S+ NQ E +
Sbjct: 205 LYHNFSISKDNCLSIVSEIQPEMLVELAPPYFLSNLPPSESRDLLNQLREEM 256
Score = 132 (51.5 bits), Expect = 8.2e-06, P = 8.2e-06
Identities = 44/155 (28%), Positives = 71/155 (45%)
Query: 331 VRKQLLGIMDRHKLDV----VSAGKNTVRVQKAVCSGFFRNAAKKDPQEG-YRTLVDSQV 385
+R +LL +M R +L + + +N +QKA+ SG+F A+ G Y L V
Sbjct: 123 LRGELLELMQRIELPLSPPAFGSEQNRRDLQKALVSGYFLKVARDTDGTGNYLLLTHKHV 182
Query: 386 VYIHPSSALFNRQ-----PEWVIYHELVQTTKEYMREVTSIDPKWLVEFAPAFFKFSDPT 440
+ P NR+ P WV+YH + + V+ I P+ LVE AP +F + P
Sbjct: 183 AQLSPYCCYRNRRAPARPPPWVLYHNFSISKDNCLSIVSEIQPEMLVELAPPYFLSNLPP 242
Query: 441 KLSKFKKNQRLEPLYNKYEEPNAWRISREEIDTAC 475
S+ NQ E + + ++ S +E+ AC
Sbjct: 243 SESRDLLNQLREEMADSSMGSDS--SSTQELGHAC 275
>POMBASE|SPAC20H4.09 [details] [associations]
symbol:SPAC20H4.09 "ATP-dependent RNA helicase,
spliceosomal (predicted)" species:4896 "Schizosaccharomyces pombe"
[GO:0004004 "ATP-dependent RNA helicase activity" evidence=IC;ISS]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005681 "spliceosomal complex" evidence=ISS]
[GO:0005829 "cytosol" evidence=IDA] [GO:0045292 "mRNA cis splicing,
via spliceosome" evidence=ISS] [GO:0071276 "cellular response to
cadmium ion" evidence=IMP] [GO:0071585 "detoxification of cadmium
ion" evidence=IMP] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 PomBase:SPAC20H4.09
GO:GO:0005829 GO:GO:0005524 GO:GO:0005634 EMBL:CU329670
GO:GO:0008380 GO:GO:0071276 GO:GO:0071585 GO:GO:0006397
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717 GO:GO:0004004
HOGENOM:HOG000175261 RefSeq:NP_593629.1 ProteinModelPortal:Q9HE06
EnsemblFungi:SPAC20H4.09.1 GeneID:2542874 KEGG:spo:SPAC20H4.09
OMA:NYSVIIL OrthoDB:EOG4BGD47 NextBio:20803914 Uniprot:Q9HE06
Length = 647
Score = 259 (96.2 bits), Expect = 4.5e-19, P = 4.5e-19
Identities = 57/202 (28%), Positives = 104/202 (51%)
Query: 11 QMAEFPLEPNLSKMLIMSVHLQCSDEVLTIVSMLSVQNVFYRPXXXXXXXXXXX-XXFNQ 69
Q++ L+ N+SK L+ S C+ E+L+I S+L+ VFY P F
Sbjct: 442 QISNSFLDANISKALLTSNQFGCTHEILSIASILTAGEVFYNPTSSSKNDAFVAHSSFFA 501
Query: 70 MEGDHITLLAVYNSWRNNKFSNAWCYENFVQIRTLKRAQDVRKQLLGIMDRHKLDVVSA- 128
EGD IT L V+ S+ NK WC +N++ +TL++A D+R L+ +++ +
Sbjct: 502 NEGDIITALNVFESFVGNKKDLQWCRKNYLNYQTLRQALDIRTHLVRFLNKFSIPTAQRL 561
Query: 129 -GKNTVRVQKAVCSGFFRNAAKKDPQEGYRTLVDSQVVYIHPSSALFNRQPEWVIYHELV 187
+ ++ K + GF RN A Y+T+ QV ++ SS L ++ W++Y V
Sbjct: 562 PSSDCSKILKCLLDGFVRNVAHLQNDGSYKTIGGKQV-WLDSSSVLHEKKTPWIMYSSAV 620
Query: 188 QT-TKEYMREVTSIDPKWLVEF 208
++ T+ +++ ++ I+ WL ++
Sbjct: 621 ESETQIFVKNISKIESFWLDKY 642
Score = 195 (73.7 bits), Expect = 1.0e-21, Sum P(2) = 1.0e-21
Identities = 44/128 (34%), Positives = 79/128 (61%)
Query: 215 FSDPTKLSKFKKNQRLEPLQRTNRISFPPGLLKQAVKKRPEIKLIVTSATLDAVKFSSYF 274
F DP L ++ E +RT G+LK+ ++KR + +L+++SA++DA K S +F
Sbjct: 132 FFDPL-LERYSIVILDEVHERTLSTDLLLGVLKRILEKRNDFRLVLSSASVDANKLSQFF 190
Query: 275 FEAPIFT--IPGRTFPVEVLYTKEPETDYLDASLITVMQIHLREPPGDVLLFLTGKLDVR 332
+ + T I G+ FPVE L+ ++P +Y+D+++ TV+ I+ PPGD+L+FL+G+ ++
Sbjct: 191 GQDKVCTMSIEGKLFPVETLFLQKPTENYVDSAIETVININSTYPPGDILVFLSGRKEIE 250
Query: 333 KQLLGIMD 340
+ I D
Sbjct: 251 YCIKKIED 258
Score = 139 (54.0 bits), Expect = 1.0e-21, Sum P(2) = 1.0e-21
Identities = 30/74 (40%), Positives = 45/74 (60%)
Query: 468 REEIDTACEILYERMKSLGPDVPELIILPVYSALPSEMQTRIFEAAPPGSRKVVIATNIA 527
R+EI+ + + + + D L+ LP+++ L + Q R+F RKV+ +TNIA
Sbjct: 246 RKEIEYCIKKIEDSLIHASEDCQTLVPLPLHAGLTVDEQMRVFNIYDGDFRKVIFSTNIA 305
Query: 528 ETSLTIDGIFYVVD 541
ETS+TIDGI YVVD
Sbjct: 306 ETSITIDGIVYVVD 319
Score = 113 (44.8 bits), Expect = 5.2e-19, Sum P(2) = 5.2e-19
Identities = 24/104 (23%), Positives = 53/104 (50%)
Query: 329 LDVRKQLLGIMDRHKLDVVSA--GKNTVRVQKAVCSGFFRNAAKKDPQEGYRTLVDSQVV 386
LD+R L+ +++ + + ++ K + GF RN A Y+T+ QV
Sbjct: 540 LDIRTHLVRFLNKFSIPTAQRLPSSDCSKILKCLLDGFVRNVAHLQNDGSYKTIGGKQV- 598
Query: 387 YIHPSSALFNRQPEWVIYHELVQT-TKEYMREVTSIDPKWLVEF 429
++ SS L ++ W++Y V++ T+ +++ ++ I+ WL ++
Sbjct: 599 WLDSSSVLHEKKTPWIMYSSAVESETQIFVKNISKIESFWLDKY 642
>UNIPROTKB|Q5THR1 [details] [associations]
symbol:DHX35 "Probable ATP-dependent RNA helicase DHX35"
species:9606 "Homo sapiens" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR007502
Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194
SMART:SM00490 SMART:SM00847 GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 HOGENOM:HOG000175261 HOVERGEN:HBG039428
EMBL:AL023803 UniGene:Hs.444520 HGNC:HGNC:15861 IPI:IPI00642913
SMR:Q5THR1 Ensembl:ENST00000373325 Uniprot:Q5THR1
Length = 679
Score = 247 (92.0 bits), Expect = 1.1e-17, P = 1.1e-17
Identities = 55/165 (33%), Positives = 92/165 (55%)
Query: 2 DSLVVTPIS-QMAEFPLEPNLSKMLIMSVHLQCSDEVLTIVSMLSVQNVFYRPXXXXXXX 60
D + P+ ++AEFPL P +KML+ S + CS E+L+I +M+ +QN+F P
Sbjct: 472 DCRLTEPLGMRIAEFPLNPMFAKMLLESGNFGCSQEILSIAAMMQIQNIFVVPPNQKSHA 531
Query: 61 XXXXXXFNQMEGDHITLLAVYNSW-RNNKFSNAWCYENFVQIRTLKRAQDVRKQLLGIMD 119
F EGDH+T+L +Y ++ ++NK S WC E+F+ + L RA VR+QL ++
Sbjct: 532 IRVHRKFAVEEGDHLTMLNIYEAFIKHNKDSK-WCQEHFLNYKGLVRAATVREQLKKLLV 590
Query: 120 RHKLDVVSAGKNTVRVQKAVCSGFFRNAAKKDPQEGYRTLVDSQV 164
+ ++ S+ + V + + SGFF NAA+ YR + + +
Sbjct: 591 KFQVPRKSSEGDPDLVLRCIVSGFFANAARFHSTGAYRVIYNEVI 635
Score = 211 (79.3 bits), Expect = 2.4e-21, Sum P(2) = 2.4e-21
Identities = 56/150 (37%), Positives = 85/150 (56%)
Query: 217 DPTKLSKFKKNQRLEPLQRTNRISFPPGLLKQAVKKRPEIKLIVTSATLDAVKFSSYFFE 276
DP L+K+ E +RT GLLK+ KKR +++LIV SATLDA KF +F +
Sbjct: 164 DPL-LTKYSVIMLDEAHERTLYTDIAIGLLKKIQKKRGDLRLIVASATLDADKFRDFFNQ 222
Query: 277 A----P------IFTIPGRTFPVEVLYTKEPETDYLDASLITVMQIHLREPPGDVLLFLT 326
P I T+ GRTFPV++ Y + P DY+ +++ TV++IH E GDVL FLT
Sbjct: 223 NETSDPARDTCVILTVEGRTFPVDIFYLQSPVPDYIKSTVETVVKIHQTEGDGDVLAFLT 282
Query: 327 GKLDVRKQLLGIMDRHKLDVVSAGKNTVRV 356
G+ +V + ++++ + + K +RV
Sbjct: 283 GQEEVETVVSMLIEQARALARTGMKRHLRV 312
Score = 165 (63.1 bits), Expect = 1.1e-08, P = 1.1e-08
Identities = 35/88 (39%), Positives = 57/88 (64%)
Query: 463 AWRISREEIDTACEILYERMKSLGPDVPE--LIILPVYSALPSEMQTRIFEAAPPGSRKV 520
A+ +EE++T +L E+ ++L + L +LP+Y+ LPS Q ++FE RKV
Sbjct: 279 AFLTGQEEVETVVSMLIEQARALARTGMKRHLRVLPMYAGLPSFEQMKVFERVSRSVRKV 338
Query: 521 VIATNIAETSLTIDGIFYVVDPFDIEVR 548
++ATN+AETS+TI GI YV+D +++R
Sbjct: 339 IVATNVAETSITISGIVYVIDCGFVKLR 366
Score = 119 (46.9 bits), Expect = 2.4e-21, Sum P(2) = 2.4e-21
Identities = 32/90 (35%), Positives = 53/90 (58%)
Query: 366 RNAAKKDPQEGYRTLVDSQVVYIHPSSALFNRQPEW-VIYHELVQTTKEYMREVTSIDPK 424
R +++ DP R +V ++A F+ + VIY+E++QT+K YMR+VT+I+
Sbjct: 596 RKSSEGDPDLVLRCIVSG----FFANAARFHSTGAYRVIYNEVIQTSKYYMRDVTAIESA 651
Query: 425 WLVEFAPAFFKFSDPTKLS-KFKKNQRLEP 453
WL+E AP F++ T LS K K+ + +P
Sbjct: 652 WLLELAPHFYQ--QGTHLSLKAKRAKVQDP 679
>RGD|1311165 [details] [associations]
symbol:Dhx35 "DEAH (Asp-Glu-Ala-His) box polypeptide 35"
species:10116 "Rattus norvegicus" [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0071013 "catalytic step 2 spliceosome" evidence=IEA;ISO]
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR007502
Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194
SMART:SM00490 SMART:SM00847 RGD:1311165 GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 GeneTree:ENSGT00700000104241 KO:K13117
OMA:NIFVVPP CTD:60625 EMBL:CH474005 IPI:IPI00764730
RefSeq:NP_001102071.1 UniGene:Rn.118078 Ensembl:ENSRNOT00000021435
GeneID:362260 KEGG:rno:362260 UCSC:RGD:1311165 NextBio:679233
Uniprot:D4AEG5
Length = 679
Score = 257 (95.5 bits), Expect = 8.4e-19, P = 8.4e-19
Identities = 57/165 (34%), Positives = 93/165 (56%)
Query: 2 DSLVVTPIS-QMAEFPLEPNLSKMLIMSVHLQCSDEVLTIVSMLSVQNVFYRPXXXXXXX 60
D + P+ ++AEFPL P +KML+ S + CS E+L+I +M+ +QNVF P
Sbjct: 472 DCRLTEPLGMRIAEFPLNPMFAKMLLESGNFGCSQEILSIAAMMQIQNVFVFPSNQKSQA 531
Query: 61 XXXXXXFNQMEGDHITLLAVYNSW-RNNKFSNAWCYENFVQIRTLKRAQDVRKQLLGIMD 119
F EGDH+T+L VY ++ ++NK S+ WC E+F+ + L RA VR QL ++
Sbjct: 532 TRVHRKFAVEEGDHLTMLNVYEAFIKHNK-SSQWCQEHFLNYKGLVRAATVRDQLKKLLV 590
Query: 120 RHKLDVVSAGKNTVRVQKAVCSGFFRNAAKKDPQEGYRTLVDSQV 164
+ ++ +S+ + V + + SGFF NAA+ YR + + +
Sbjct: 591 KFQVPKMSSEGDPDPVLRCIVSGFFANAARFHSTGAYRVIYNEVI 635
Score = 214 (80.4 bits), Expect = 2.9e-21, Sum P(2) = 2.9e-21
Identities = 56/150 (37%), Positives = 85/150 (56%)
Query: 217 DPTKLSKFKKNQRLEPLQRTNRISFPPGLLKQAVKKRPEIKLIVTSATLDAVKFSSYFFE 276
DP L+K+ E +RT GLLK+ KKR +++LIV SATLDA KF +F +
Sbjct: 164 DPL-LTKYSVVMLDEAHERTLYTDIAIGLLKKIQKKRGDLRLIVASATLDAEKFRDFFNQ 222
Query: 277 A----P------IFTIPGRTFPVEVLYTKEPETDYLDASLITVMQIHLREPPGDVLLFLT 326
P I T+ GRTFPV++ Y + P DY+ A++ TV++IH E GD+L FLT
Sbjct: 223 NETSDPARDTCVILTVEGRTFPVDIFYLQSPVPDYIKATVDTVVKIHQTEGDGDILAFLT 282
Query: 327 GKLDVRKQLLGIMDRHKLDVVSAGKNTVRV 356
G+ +V + ++++ + + K +RV
Sbjct: 283 GQEEVETVVSMLIEQARALARTGMKKHLRV 312
Score = 165 (63.1 bits), Expect = 1.1e-08, P = 1.1e-08
Identities = 34/81 (41%), Positives = 52/81 (64%)
Query: 463 AWRISREEIDTACEILYERMKSLGPD--VPELIILPVYSALPSEMQTRIFEAAPPGSRKV 520
A+ +EE++T +L E+ ++L L +LP+Y+ LPS Q ++FE RKV
Sbjct: 279 AFLTGQEEVETVVSMLIEQARALARTGMKKHLRVLPMYAGLPSFEQMKVFERVSHSVRKV 338
Query: 521 VIATNIAETSLTIDGIFYVVD 541
++ATN+AETS+TI GI YV+D
Sbjct: 339 IVATNVAETSITISGIVYVID 359
Score = 115 (45.5 bits), Expect = 2.9e-21, Sum P(2) = 2.9e-21
Identities = 29/86 (33%), Positives = 50/86 (58%)
Query: 368 AAKKDPQEGYRTLVDSQVVYIHPSSALFNRQPEW-VIYHELVQTTKEYMREVTSIDPKWL 426
+++ DP R +V ++A F+ + VIY+E++QT+K YMR+VT+I+ WL
Sbjct: 598 SSEGDPDPVLRCIVSG----FFANAARFHSTGAYRVIYNEVIQTSKYYMRDVTAIESAWL 653
Query: 427 VEFAPAFFKFSDPTKLSKFKKNQRLE 452
+E AP F++ T LS K +++
Sbjct: 654 LELAPHFYQ--QGTHLSLKAKRAKVQ 677
>SGD|S000001561 [details] [associations]
symbol:DHR2 "Predominantly nucleolar DEAH-box ATP-dependent
RNA helicase" species:4932 "Saccharomyces cerevisiae" [GO:0005730
"nucleolus" evidence=IEA;IDA] [GO:0003724 "RNA helicase activity"
evidence=IDA] [GO:0042254 "ribosome biogenesis" evidence=IDA;TAS]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0004386 "helicase
activity" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0000462 "maturation of SSU-rRNA from tricistronic
rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)" evidence=IMP]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0006364 "rRNA
processing" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0003723 "RNA binding" evidence=IEA] [GO:0000166 "nucleotide
binding" evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 SGD:S000001561 GO:GO:0005524 GO:GO:0005730
EMBL:BK006944 GO:GO:0003723 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 eggNOG:COG1643 GeneTree:ENSGT00700000104393
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026 HOGENOM:HOG000175261
GO:GO:0003724 GO:GO:0000462 EMBL:AF005090 EMBL:L15328 EMBL:X75560
EMBL:Z28078 PIR:S37903 RefSeq:NP_012845.1 ProteinModelPortal:P36009
SMR:P36009 DIP:DIP-6424N IntAct:P36009 MINT:MINT-677951
STRING:P36009 PaxDb:P36009 PeptideAtlas:P36009 EnsemblFungi:YKL078W
GeneID:853784 KEGG:sce:YKL078W CYGD:YKL078w KO:K14781 OMA:PGQEEID
OrthoDB:EOG4F7RTB NextBio:974906 Genevestigator:P36009
GermOnline:YKL078W Uniprot:P36009
Length = 735
Score = 184 (69.8 bits), Expect = 6.0e-21, Sum P(2) = 6.0e-21
Identities = 44/112 (39%), Positives = 65/112 (58%)
Query: 231 EPLQRTNRISFPPGLLKQAVK-KRPEIKLIVTSATLDAVKFSSYFFEAPIFTIPGRTFPV 289
E +RT G LK ++ RP++++IV SATL A KFS +F API + GR F V
Sbjct: 204 EAHERTVLTDLILGFLKSLIQGPRPDLRIIVMSATLQAEKFSEFFNNAPILFVEGRKFDV 263
Query: 290 EVLYTKEPETDYLDASLITVMQIHLREPPGDVLLFLTGKLDVRKQLLGIMDR 341
+ Y K P D +DA + +QI+ E GD+L FL G+ ++ K + IM++
Sbjct: 264 KQYYLKAPTDDIVDAVIRCCIQINQGEELGDILCFLPGQEEIDKAVT-IMEK 314
Score = 152 (58.6 bits), Expect = 3.1e-07, P = 3.1e-07
Identities = 42/128 (32%), Positives = 58/128 (45%)
Query: 91 NAWCYENFVQIRTLKRAQDVRKQL----------LGIMDRHKLDVVSAGKNTVRVQKAVC 140
N WC + IR K VR QL + D + G+ ++ K
Sbjct: 591 NDWCKGLCISIRGFKNVIRVRDQLRVYCKRLFSSISEEDEESKKIGEDGELISKILKCFL 650
Query: 141 SGFFRNAAKKDPQEGYRTLVDSQVVYIHPSSALF-NRQPEWVIYHELVQTTKEYMREVTS 199
+GF +N A P YRT+ + + IHPSS LF N+ ++Y E V TTK Y R V+
Sbjct: 651 TGFIKNTAIGMPDRSYRTVSTGEPISIHPSSMLFMNKSCPGIMYTEYVFTTKGYARNVSR 710
Query: 200 IDPKWLVE 207
I+ WL E
Sbjct: 711 IELSWLQE 718
Score = 145 (56.1 bits), Expect = 6.0e-21, Sum P(2) = 6.0e-21
Identities = 33/76 (43%), Positives = 49/76 (64%)
Query: 468 REEIDTACEILYERMKSLGPDVPELIILP--VYSALPSEMQTRIFEAAPPGSRKVVIATN 525
+EEID A I+ + K + + P +I+P +Y+ALP+ Q+ +F RKVV +TN
Sbjct: 302 QEEIDKAVTIMEKIAKYVSDEAPVPLIVPYPLYAALPAVQQSLVFAPIKGFKRKVVFSTN 361
Query: 526 IAETSLTIDGIFYVVD 541
IAETS+TI G+ +VVD
Sbjct: 362 IAETSVTISGVKFVVD 377
Score = 140 (54.3 bits), Expect = 2.0e-20, Sum P(2) = 2.0e-20
Identities = 32/90 (35%), Positives = 46/90 (51%)
Query: 340 DRHKLDVVSAGKNTVRVQKAVCSGFFRNAAKKDPQEGYRTLVDSQVVYIHPSSALF-NRQ 398
D + G+ ++ K +GF +N A P YRT+ + + IHPSS LF N+
Sbjct: 629 DEESKKIGEDGELISKILKCFLTGFIKNTAIGMPDRSYRTVSTGEPISIHPSSMLFMNKS 688
Query: 399 PEWVIYHELVQTTKEYMREVTSIDPKWLVE 428
++Y E V TTK Y R V+ I+ WL E
Sbjct: 689 CPGIMYTEYVFTTKGYARNVSRIELSWLQE 718
Score = 101 (40.6 bits), Expect = 1.5e-11, Sum P(2) = 1.5e-11
Identities = 36/116 (31%), Positives = 53/116 (45%)
Query: 11 QMAEFPLEPNLSKMLIMSVHLQCSDEVLTIVSMLSVQNVFYRPX--XXXXXXXXXXXXFN 68
QMA PL+P+LS +LI + + C +V+ IVS LSV+N+ P N
Sbjct: 499 QMALLPLQPHLSSVLIKASEVGCLSQVIDIVSCLSVENLLLNPSPEERDEVNERRLSLCN 558
Query: 69 --QMEGDHITLLAVYNSW-----RNNKFS---NAWCYENFVQIRTLKRAQDVRKQL 114
+ GD I L +++ + ++ S N WC + IR K VR QL
Sbjct: 559 AGKRYGDLIMLKELFDIYFYELGKSQDASSERNDWCKGLCISIRGFKNVIRVRDQL 614
Score = 42 (19.8 bits), Expect = 5.2e-06, Sum P(2) = 5.2e-06
Identities = 23/108 (21%), Positives = 43/108 (39%)
Query: 95 YENFVQIRT-LKRAQD--VRKQLLGIMDRHKLDVVSAGKNTVR-VQKAVCSGFFRNAAKK 150
++N RT LK D + ++L+ D + V+ + R V + GF ++ +
Sbjct: 166 FDNTTTTRTRLKYLTDGMLLRELMMNSDLREYSVIVIDEAHERTVLTDLILGFLKSLIQ- 224
Query: 151 DPQEGYRTLVDSQVVYIHPSSALFNRQPEWVIYHELVQTTKEYMREVT 198
P+ R +V S + S FN P + + Y++ T
Sbjct: 225 GPRPDLRIIVMSATLQAEKFSEFFNNAPILFVEGRKFDVKQYYLKAPT 272
Score = 40 (19.1 bits), Expect = 8.3e-06, Sum P(2) = 8.3e-06
Identities = 20/99 (20%), Positives = 40/99 (40%)
Query: 322 LLFLTGKLDVRKQLLGIMDRHKLDVVSAGKNTVR-VQKAVCSGFFRNAAKKDPQEGYRTL 380
L +LT + +R+ ++ D + V+ + R V + GF ++ + P+ R +
Sbjct: 176 LKYLTDGMLLRELMMN-SDLREYSVIVIDEAHERTVLTDLILGFLKSLIQ-GPRPDLRII 233
Query: 381 VDSQVVYIHPSSALFNRQPEWVIYHELVQTTKEYMREVT 419
V S + S FN P + + Y++ T
Sbjct: 234 VMSATLQAEKFSEFFNNAPILFVEGRKFDVKQYYLKAPT 272
>UNIPROTKB|C9JEW8 [details] [associations]
symbol:DHX40 "Probable ATP-dependent RNA helicase DHX40"
species:9606 "Homo sapiens" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408
PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
HOGENOM:HOG000175261 HGNC:HGNC:18018 ChiTaRS:DHX40 EMBL:AC091271
EMBL:AC004167 IPI:IPI00789290 ProteinModelPortal:C9JEW8 SMR:C9JEW8
STRING:C9JEW8 Ensembl:ENST00000451169 ArrayExpress:C9JEW8
Bgee:C9JEW8 Uniprot:C9JEW8
Length = 731
Score = 258 (95.9 bits), Expect = 7.5e-19, P = 7.5e-19
Identities = 74/256 (28%), Positives = 126/256 (49%)
Query: 12 MAEFPLEPNLSKMLIMSVHLQCSDEVLTIVSMLSVQNVFYRPXX--XXXXXXXXXXXFNQ 69
M EFPL P+L+ +I + L C D +L I +MLSV+NVF RP
Sbjct: 438 MVEFPLPPHLTCAVIKAASLDCEDLLLPIAAMLSVENVFIRPVDPEYQKEAEQRHRELAA 497
Query: 70 MEG---DHITLLAVYNSWRNNKFSNAWCYENFVQIRTLKRAQDVRKQLLGIMDRHKL--- 123
G D TL ++ +++ +WC ++++ R L A V QL ++ + K
Sbjct: 498 KAGGFNDFATLAVIFEQCKSSGAPASWCQKHWIHWRCLFSAFRVEAQLRELIRKLKQQSD 557
Query: 124 ---DVVSAGKNTVRVQKAVCSGFFRNAAKKDPQEGYRTLVD-SQVVYIHPSSALFNRQP- 178
+ K+ V +++ +C+G+F+N A++ + T+ V+IHPSSAL ++
Sbjct: 558 FPKETFEGPKHEV-LRRCLCAGYFKNVARRSVGRTFCTMDGRGSPVHIHPSSALHEQETK 616
Query: 179 -EWVIYHELVQTTKEYMREVTSIDPKWLVEFAPAFFKFSDPTKLSKFKKNQRLEPLQR-T 236
EW+I+HE++ TTK Y R V I +W+ + P +F+ S ++ R + +R T
Sbjct: 617 LEWIIFHEVLVTTKVYARIVCPIRYEWVRDLLPKLHEFNAHDLSSVARREVREDARRRWT 676
Query: 237 NRISFPPGLLKQAVKK 252
N+ + LK + K
Sbjct: 677 NKENVKQ--LKDGISK 690
Score = 177 (67.4 bits), Expect = 1.7e-20, Sum P(2) = 1.7e-20
Identities = 48/128 (37%), Positives = 71/128 (55%)
Query: 217 DPTKLSKFKKNQRLEPLQRTNRISFPPGLLKQAVK-KRPE----IKLIVTSATLDAVKFS 271
DP L+KF E +RT GLLK+ + K P +K++V SAT++ K S
Sbjct: 62 DPN-LTKFSVIILDEAHERTLTTDILFGLLKKLFQEKSPNRKEHLKVVVMSATMELAKLS 120
Query: 272 SYFFEAPIFTIPGRTFPVE-----VLYTKEPE-TDYLDASLITVMQIHLREPPGDVLLFL 325
++F PIF IPGR +PV ++ ++ E T Y+ A + M IHL E GD+L+FL
Sbjct: 121 AFFGNCPIFDIPGRLYPVREKFCNLIGPRDRENTAYIQAIVKVTMDIHLNEMAGDILVFL 180
Query: 326 TGKLDVRK 333
TG+ ++ K
Sbjct: 181 TGQFEIEK 188
Score = 148 (57.2 bits), Expect = 1.7e-20, Sum P(2) = 1.7e-20
Identities = 29/85 (34%), Positives = 52/85 (61%)
Query: 356 VQKAVCSGFFRNAAKKDPQEGYRTLVD-SQVVYIHPSSALFNRQP--EWVIYHELVQTTK 412
+++ +C+G+F+N A++ + T+ V+IHPSSAL ++ EW+I+HE++ TTK
Sbjct: 571 LRRCLCAGYFKNVARRSVGRTFCTMDGRGSPVHIHPSSALHEQETKLEWIIFHEVLVTTK 630
Query: 413 EYMREVTSIDPKWLVEFAPAFFKFS 437
Y R V I +W+ + P +F+
Sbjct: 631 VYARIVCPIRYEWVRDLLPKLHEFN 655
Score = 121 (47.7 bits), Expect = 1.1e-17, Sum P(2) = 1.1e-17
Identities = 26/36 (72%), Positives = 28/36 (77%)
Query: 506 QTRIFEAAPPGSRKVVIATNIAETSLTIDGIFYVVD 541
Q RIF PPG RK VI+TNI+ TSLTIDGI YVVD
Sbjct: 279 QRRIFLPPPPGIRKCVISTNISATSLTIDGIRYVVD 314
Score = 66 (28.3 bits), Expect = 5.7e-12, Sum P(2) = 5.7e-12
Identities = 22/74 (29%), Positives = 37/74 (50%)
Query: 470 EIDTACEILYERMKSLGPD--VPE-----LIILPVYSALPSEMQTRIFEAAPPGSRKVVI 522
EI+ +CE+L++ +S+ D V + L+ILP Y ++ + QT + K +
Sbjct: 185 EIEKSCELLFQMAESVDYDYDVQDTTLDGLLILPCYGSMTTVSQTSLTFVTHIQIMKQIS 244
Query: 523 ATNIAETSLTIDGI 536
+ T LTI GI
Sbjct: 245 ENQHSLTGLTIAGI 258
>ASPGD|ASPL0000001852 [details] [associations]
symbol:AN6085 species:162425 "Emericella nidulans"
[GO:0008150 "biological_process" evidence=ND] [GO:0005730
"nucleolus" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 Pfam:PF00271 Pfam:PF04408
PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
GO:GO:0005524 GO:GO:0003676 EMBL:BN001301 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 OMA:PGQEEID EnsemblFungi:CADANIAT00006930
Uniprot:C8V2M2
Length = 824
Score = 264 (98.0 bits), Expect = 1.2e-18, Sum P(2) = 1.2e-18
Identities = 66/214 (30%), Positives = 108/214 (50%)
Query: 10 SQMAEFPLEPNLSKMLIMSVHL--QCSDEVLTIVSMLSVQNVFYRPXXXXXXXXXXXXXF 67
S +A+ PL P L ++L+ + C +V+ I+S LSV+N+F
Sbjct: 606 SHIAKLPLTPTLGRVLLAASDFGPDCLTDVIDIISCLSVENIFLNTTSEEKKEAAEAARR 665
Query: 68 N--QMEGDHITLLAVYNSWRN-NKFSNAWCYENFVQIRTLKRAQDVRKQLLGIMDRHKL- 123
+ + EGDH+T+LA ++ + N AW + V R ++ DVRKQL + KL
Sbjct: 666 DLYRREGDHLTMLATVRAYASENTDRKAWAERHLVSHRAMQSVMDVRKQLTAQCRQAKLL 725
Query: 124 ----DVVSAGKNTVR------VQKAVCSGFFRNAAKKDPQEGYRTLVDSQVVYIHPSSAL 173
+ + +++R + K+ GF N A+ P YRT+V +Q V IHPSS L
Sbjct: 726 PSPTESRDSDSSSIREPSPVFILKSFLRGFATNTARLVPDGSYRTVVGNQTVAIHPSSVL 785
Query: 174 FNRQPEWVIYHELVQTTKEYMREVTSIDPKWLVE 207
F ++ E ++Y+E V T + Y R V+++ W+ E
Sbjct: 786 FGKKVEAILYNEFVFTNRSYARGVSAVQMDWVGE 819
Score = 181 (68.8 bits), Expect = 2.0e-20, Sum P(3) = 2.0e-20
Identities = 32/82 (39%), Positives = 56/82 (68%)
Query: 468 REEIDTACEILYERMKSLGPDVPELIILPVYSALPSEMQTRIFEAAPPGSRKVVIATNIA 527
+E ++ ++ E + P +P++ +LP+++ALP Q R+F APP +RK+++ATNIA
Sbjct: 412 QETVEALENLVNEYATGMDPSLPKIQVLPLFAALPQAAQQRVFVPAPPRTRKIILATNIA 471
Query: 528 ETSLTIDGIFYVVDPFDIEVRQ 549
ETS+T+ G+ YVVD +++Q
Sbjct: 472 ETSVTVSGVRYVVDCGKAKIKQ 493
Score = 152 (58.6 bits), Expect = 3.2e-17, Sum P(3) = 3.2e-17
Identities = 38/111 (34%), Positives = 60/111 (54%)
Query: 329 LDVRKQLLGIMDRHKL-----DVVSAGKNTVR------VQKAVCSGFFRNAAKKDPQEGY 377
+DVRKQL + KL + + +++R + K+ GF N A+ P Y
Sbjct: 709 MDVRKQLTAQCRQAKLLPSPTESRDSDSSSIREPSPVFILKSFLRGFATNTARLVPDGSY 768
Query: 378 RTLVDSQVVYIHPSSALFNRQPEWVIYHELVQTTKEYMREVTSIDPKWLVE 428
RT+V +Q V IHPSS LF ++ E ++Y+E V T + Y R V+++ W+ E
Sbjct: 769 RTVVGNQTVAIHPSSVLFGKKVEAILYNEFVFTNRSYARGVSAVQMDWVGE 819
Score = 143 (55.4 bits), Expect = 2.0e-20, Sum P(3) = 2.0e-20
Identities = 26/48 (54%), Positives = 37/48 (77%)
Query: 282 IPGRTFPVEVLYTKEPETDYLDASLITVMQIHLREP-PGDVLLFLTGK 328
I GR FPV+ +Y+ EP D++DA+L + QIH +EP PGD+L+FLTG+
Sbjct: 365 IKGRQFPVKTIYSPEPVHDFVDAALKVIFQIHYKEPIPGDILVFLTGQ 412
Score = 45 (20.9 bits), Expect = 2.0e-20, Sum P(3) = 2.0e-20
Identities = 23/89 (25%), Positives = 34/89 (38%)
Query: 198 TSIDPKWLVEFAPAFFKFS----DPTKLSKFKKNQRLEPLQRTNRISFPPGLLKQAVKKR 253
TS+ P V+F DP L+K+ E +R + G L+ V +
Sbjct: 255 TSVSPSTRVKFLTEGMLLQEMLHDPW-LTKYSAIVVDEVHERGVNVDLVMGFLRNLVSGK 313
Query: 254 PE------IKLIVTSATLDAVKFSSYFFE 276
E +K +V SAT D +F E
Sbjct: 314 REGRGGVPLKAVVMSATADMESLQEFFVE 342
Score = 39 (18.8 bits), Expect = 1.2e-18, Sum P(2) = 1.2e-18
Identities = 8/13 (61%), Positives = 11/13 (84%)
Query: 1 MDSLVVTPISQMA 13
+DSL+V PIS+ A
Sbjct: 500 LDSLLVKPISKSA 512
>UNIPROTKB|P43329 [details] [associations]
symbol:hrpA species:83333 "Escherichia coli K-12"
[GO:0004386 "helicase activity" evidence=IEA;IMP] [GO:0009451 "RNA
modification" evidence=IMP] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0004004 "ATP-dependent RNA
helicase activity" evidence=ISS] [GO:0006397 "mRNA processing"
evidence=IMP] InterPro:IPR001650 InterPro:IPR003593
InterPro:IPR007502 InterPro:IPR010222 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00382 SMART:SM00490 SMART:SM00847
GO:GO:0005524 EMBL:U00096 EMBL:AP009048 GenomeReviews:AP009048_GR
GenomeReviews:U00096_GR GO:GO:0006397 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 EMBL:D42105
eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717 GO:GO:0004004
GO:GO:0009451 PIR:H64892 RefSeq:NP_415931.4 RefSeq:YP_489680.1
ProteinModelPortal:P43329 SMR:P43329 DIP:DIP-9937N IntAct:P43329
MINT:MINT-1229564 PRIDE:P43329 EnsemblBacteria:EBESCT00000000014
EnsemblBacteria:EBESCT00000015011 GeneID:12932513 GeneID:948444
KEGG:ecj:Y75_p1389 KEGG:eco:b1413 PATRIC:32118112 EchoBASE:EB2772
EcoGene:EG12936 HOGENOM:HOG000247272 KO:K03578 OMA:TYQFEPG
ProtClustDB:PRK11131 BioCyc:EcoCyc:G6732-MONOMER
BioCyc:ECOL316407:JW5905-MONOMER Genevestigator:P43329
InterPro:IPR024590 Pfam:PF11898 TIGRFAMs:TIGR01967 Uniprot:P43329
Length = 1300
Score = 204 (76.9 bits), Expect = 1.5e-12, P = 1.5e-12
Identities = 56/222 (25%), Positives = 104/222 (46%)
Query: 6 VTPIS-QMAEFPLEPNLSKMLIMSVHLQCSDEVLTIVSMLSVQNVFYRPXXXXXXXXXXX 64
+TP+ Q+++ P++P L++M++ + C E + I S LS+Q+ RP
Sbjct: 486 LTPLGRQLSQLPVDPRLARMVLEAQKHGCVREAMIITSALSIQDPRERPMDKQQASDEKH 545
Query: 65 XXFNQMEGDHITLLAVYNSWRNNK---FSNAW---CYENFVQIRTLKRAQDVRKQLLGIM 118
F+ E D + + ++N + SNA+ C +++ ++ QD+ QL ++
Sbjct: 546 RRFHDKESDFLAFVNLWNYLGEQQKALSSNAFRRLCRTDYLNYLRVREWQDIYTQLRQVV 605
Query: 119 DRHKLDVVSAGKNTVRVQKAVCSGFFRNAAKKDPQEGYRTLVDSQVVYIHPSSALFNRQP 178
+ V S + A+ +G + KD + T + I P S LF + P
Sbjct: 606 KELGIPVNSEPAEYREIHIALLTGLLSHIGMKDADKQEYTGARNARFSIFPGSGLFKKPP 665
Query: 179 EWVIYHELVQTTKEYMREVTSIDPKWLVEFAPAFFK--FSDP 218
+WV+ ELV+T++ + R IDP+W+ A K +S+P
Sbjct: 666 KWVMVAELVETSRLWGRIAARIDPEWVEPVAQHLIKRTYSEP 707
Score = 192 (72.6 bits), Expect = 5.1e-20, Sum P(2) = 5.1e-20
Identities = 42/108 (38%), Positives = 67/108 (62%)
Query: 231 EPLQRTNRISFPPGLLKQAVKKRPEIKLIVTSATLDAVKFSSYFFEAPIFTIPGRTFPVE 290
E +R+ I F G LK+ + +RP++K+I+TSAT+D +FS +F API + GRT+PVE
Sbjct: 198 EAHERSLNIDFLLGYLKELLPRRPDLKIIITSATIDPERFSRHFNNAPIIEVSGRTYPVE 257
Query: 291 VLY------TKEPETDYLDASLITVMQIHLREPPGDVLLFLTGKLDVR 332
V Y + E D L A V ++ +E GD+L+F++G+ ++R
Sbjct: 258 VRYRPIVEEADDTERDQLQAIFDAVDELS-QESHGDILIFMSGEREIR 304
Score = 134 (52.2 bits), Expect = 5.1e-20, Sum P(2) = 5.1e-20
Identities = 26/59 (44%), Positives = 40/59 (67%)
Query: 494 ILPVYSALPSEMQTRIFEAAPPGSRKVVIATNIAETSLTIDGIFYVVDPFDIEVRQAKY 552
ILP+Y+ L + Q R+F++ R++V+ATN+AETSLT+ GI YV+DP + + Y
Sbjct: 320 ILPLYARLSNSEQNRVFQSH--SGRRIVLATNVAETSLTVPGIKYVIDPGTARISRYSY 376
Score = 116 (45.9 bits), Expect = 3.8e-18, Sum P(2) = 3.8e-18
Identities = 31/112 (27%), Positives = 52/112 (46%)
Query: 330 DVRKQLLGIMDRHKLDVVSAGKNTVRVQKAVCSGFFRNAAKKDPQEGYRTLVDSQVVYIH 389
D+ QL ++ + V S + A+ +G + KD + T + I
Sbjct: 596 DIYTQLRQVVKELGIPVNSEPAEYREIHIALLTGLLSHIGMKDADKQEYTGARNARFSIF 655
Query: 390 PSSALFNRQPEWVIYHELVQTTKEYMREVTSIDPKWLVEFAPAFFK--FSDP 439
P S LF + P+WV+ ELV+T++ + R IDP+W+ A K +S+P
Sbjct: 656 PGSGLFKKPPKWVMVAELVETSRLWGRIAARIDPEWVEPVAQHLIKRTYSEP 707
>UNIPROTKB|Q8EEY1 [details] [associations]
symbol:hrpA "ATP-dependent helicase HrpA" species:211586
"Shewanella oneidensis MR-1" [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR001650 InterPro:IPR003593
InterPro:IPR007502 InterPro:IPR010222 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS51194
SMART:SM00382 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0003676 EMBL:AE014299 GenomeReviews:AE014299_GR
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 HOGENOM:HOG000247272 KO:K03578
OMA:TYQFEPG InterPro:IPR024590 Pfam:PF11898 TIGRFAMs:TIGR01967
RefSeq:NP_717826.1 ProteinModelPortal:Q8EEY1 GeneID:1169965
KEGG:son:SO_2229 PATRIC:23524089 ProtClustDB:CLSK906644
Uniprot:Q8EEY1
Length = 1293
Score = 198 (74.8 bits), Expect = 1.2e-19, Sum P(2) = 1.2e-19
Identities = 42/107 (39%), Positives = 66/107 (61%)
Query: 231 EPLQRTNRISFPPGLLKQAVKKRPEIKLIVTSATLDAVKFSSYFFEAPIFTIPGRTFPVE 290
E +R+ I F G LKQ +KKRP++K+I+TSAT+D +FS +F API + GRT+PVE
Sbjct: 197 EAHERSLNIDFILGYLKQILKKRPDLKIIITSATIDVERFSKHFNNAPIIEVSGRTYPVE 256
Query: 291 VLYTK-----EPETDYLDASLITVMQIHLREPPGDVLLFLTGKLDVR 332
Y E + D ++ V ++ + E GD+L+F+ G+ ++R
Sbjct: 257 TRYRPLVQDTEADLDQIEGIFAAVDEL-VAEGLGDILIFMNGEREIR 302
Score = 197 (74.4 bits), Expect = 1.1e-10, Sum P(2) = 1.1e-10
Identities = 54/219 (24%), Positives = 104/219 (47%)
Query: 3 SLVVTPIS-QMAEFPLEPNLSKMLIMSVHLQCSDEVLTIVSMLSVQNVFYRPXXXXXXXX 61
++V+TP+ Q+++ P++P L++M+I S L C +EVL I S LS+Q+ RP
Sbjct: 479 NIVLTPLGRQLSQIPVDPRLARMVIESHQLGCLNEVLVIASGLSIQDPRERPMDKKQASD 538
Query: 62 XXXXXFNQMEGDHITLLAVYNSWRNNK--FSNAW----CYENFVQIRTLKRAQDVRKQLL 115
F + D ++ + ++ + + S + C + ++ ++ QD+ QL
Sbjct: 539 EAHRRFADPQSDFVSWVNLWQHLKEQQKELSASQFRKKCRDEYLAYLRVREWQDLYTQLK 598
Query: 116 GIMDRHKLDVVSAGKNTVRVQKAVCSGFFRNAAKKDPQEGYRTLVDSQVVYIHPSSALFN 175
+ K + N + +A+ SG + KD Y ++ ++ P S L
Sbjct: 599 QAVHDLKWRLNDTPANYDALHRALLSGLLSHIGFKDNNNEYLG-ARNRKFFVFPGSPLAK 657
Query: 176 RQPEWVIYHELVQTTKEYMREVTSIDPKWLVEFAPAFFK 214
+ P+W++ EL++T+K + R I+P+WL A K
Sbjct: 658 KGPKWIMAAELMETSKLFARCCAKIEPEWLEPLAAHLIK 696
Score = 124 (48.7 bits), Expect = 1.2e-19, Sum P(2) = 1.2e-19
Identities = 25/59 (42%), Positives = 39/59 (66%)
Query: 494 ILPVYSALPSEMQTRIFEAAPPGSRKVVIATNIAETSLTIDGIFYVVDPFDIEVRQAKY 552
ILP+Y+ L Q+++F + R++V+ATN+AETSLT+ GI YV+DP + + Y
Sbjct: 318 ILPLYARLSYGEQSKVFSSHT--GRRIVLATNVAETSLTVPGIRYVIDPGTARISRYSY 374
Score = 103 (41.3 bits), Expect = 1.9e-17, Sum P(2) = 1.9e-17
Identities = 40/156 (25%), Positives = 71/156 (45%)
Query: 356 VQKAVCSGFFRNAAKKDPQEGYRTLVDSQVVYIHPSSALFNRQPEWVIYHELVQTTKEYM 415
+ +A+ SG + KD Y ++ ++ P S L + P+W++ EL++T+K +
Sbjct: 618 LHRALLSGLLSHIGFKDNNNEYLG-ARNRKFFVFPGSPLAKKGPKWIMAAELMETSKLFA 676
Query: 416 REVTSIDPKWLVEFAPAFFKFSDPTKLSKFKKNQRLEPLYNKYEEPNAWRISRE-EIDTA 474
R I+P+WL +P KKN LEP +E I+ E ++
Sbjct: 677 RCCAKIEPEWL-----------EPLAAHLIKKNH-LEP---HFEAKQGSVIAFENQVLYG 721
Query: 475 CEILYERMKSLGPDVP-ELIILPVYSALPS-EMQTR 508
+++ R GP P E + + SAL ++QT+
Sbjct: 722 LTVVHRRRVQYGPINPVEAREIFIRSALAEGQLQTK 757
Score = 39 (18.8 bits), Expect = 8.2e-11, Sum P(2) = 8.2e-11
Identities = 10/41 (24%), Positives = 21/41 (51%)
Query: 514 PPGSRKVVIATNIAETSLTIDGIFYVVDPFDIEVRQAKYHR 554
P +R++ I + +AE L F++ + +E +A H+
Sbjct: 737 PVEAREIFIRSALAEGQLQTKEAFFIANQKLLEDVEALEHK 777
>TIGR_CMR|SO_2229 [details] [associations]
symbol:SO_2229 "ATP-dependent helicase HrpA" species:211586
"Shewanella oneidensis MR-1" [GO:0008150 "biological_process"
evidence=ND] [GO:0008026 "ATP-dependent helicase activity"
evidence=ISS] InterPro:IPR001650 InterPro:IPR003593
InterPro:IPR007502 InterPro:IPR010222 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS51194
SMART:SM00382 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0003676 EMBL:AE014299 GenomeReviews:AE014299_GR
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 HOGENOM:HOG000247272 KO:K03578
OMA:TYQFEPG InterPro:IPR024590 Pfam:PF11898 TIGRFAMs:TIGR01967
RefSeq:NP_717826.1 ProteinModelPortal:Q8EEY1 GeneID:1169965
KEGG:son:SO_2229 PATRIC:23524089 ProtClustDB:CLSK906644
Uniprot:Q8EEY1
Length = 1293
Score = 198 (74.8 bits), Expect = 1.2e-19, Sum P(2) = 1.2e-19
Identities = 42/107 (39%), Positives = 66/107 (61%)
Query: 231 EPLQRTNRISFPPGLLKQAVKKRPEIKLIVTSATLDAVKFSSYFFEAPIFTIPGRTFPVE 290
E +R+ I F G LKQ +KKRP++K+I+TSAT+D +FS +F API + GRT+PVE
Sbjct: 197 EAHERSLNIDFILGYLKQILKKRPDLKIIITSATIDVERFSKHFNNAPIIEVSGRTYPVE 256
Query: 291 VLYTK-----EPETDYLDASLITVMQIHLREPPGDVLLFLTGKLDVR 332
Y E + D ++ V ++ + E GD+L+F+ G+ ++R
Sbjct: 257 TRYRPLVQDTEADLDQIEGIFAAVDEL-VAEGLGDILIFMNGEREIR 302
Score = 197 (74.4 bits), Expect = 1.1e-10, Sum P(2) = 1.1e-10
Identities = 54/219 (24%), Positives = 104/219 (47%)
Query: 3 SLVVTPIS-QMAEFPLEPNLSKMLIMSVHLQCSDEVLTIVSMLSVQNVFYRPXXXXXXXX 61
++V+TP+ Q+++ P++P L++M+I S L C +EVL I S LS+Q+ RP
Sbjct: 479 NIVLTPLGRQLSQIPVDPRLARMVIESHQLGCLNEVLVIASGLSIQDPRERPMDKKQASD 538
Query: 62 XXXXXFNQMEGDHITLLAVYNSWRNNK--FSNAW----CYENFVQIRTLKRAQDVRKQLL 115
F + D ++ + ++ + + S + C + ++ ++ QD+ QL
Sbjct: 539 EAHRRFADPQSDFVSWVNLWQHLKEQQKELSASQFRKKCRDEYLAYLRVREWQDLYTQLK 598
Query: 116 GIMDRHKLDVVSAGKNTVRVQKAVCSGFFRNAAKKDPQEGYRTLVDSQVVYIHPSSALFN 175
+ K + N + +A+ SG + KD Y ++ ++ P S L
Sbjct: 599 QAVHDLKWRLNDTPANYDALHRALLSGLLSHIGFKDNNNEYLG-ARNRKFFVFPGSPLAK 657
Query: 176 RQPEWVIYHELVQTTKEYMREVTSIDPKWLVEFAPAFFK 214
+ P+W++ EL++T+K + R I+P+WL A K
Sbjct: 658 KGPKWIMAAELMETSKLFARCCAKIEPEWLEPLAAHLIK 696
Score = 124 (48.7 bits), Expect = 1.2e-19, Sum P(2) = 1.2e-19
Identities = 25/59 (42%), Positives = 39/59 (66%)
Query: 494 ILPVYSALPSEMQTRIFEAAPPGSRKVVIATNIAETSLTIDGIFYVVDPFDIEVRQAKY 552
ILP+Y+ L Q+++F + R++V+ATN+AETSLT+ GI YV+DP + + Y
Sbjct: 318 ILPLYARLSYGEQSKVFSSHT--GRRIVLATNVAETSLTVPGIRYVIDPGTARISRYSY 374
Score = 103 (41.3 bits), Expect = 1.9e-17, Sum P(2) = 1.9e-17
Identities = 40/156 (25%), Positives = 71/156 (45%)
Query: 356 VQKAVCSGFFRNAAKKDPQEGYRTLVDSQVVYIHPSSALFNRQPEWVIYHELVQTTKEYM 415
+ +A+ SG + KD Y ++ ++ P S L + P+W++ EL++T+K +
Sbjct: 618 LHRALLSGLLSHIGFKDNNNEYLG-ARNRKFFVFPGSPLAKKGPKWIMAAELMETSKLFA 676
Query: 416 REVTSIDPKWLVEFAPAFFKFSDPTKLSKFKKNQRLEPLYNKYEEPNAWRISRE-EIDTA 474
R I+P+WL +P KKN LEP +E I+ E ++
Sbjct: 677 RCCAKIEPEWL-----------EPLAAHLIKKNH-LEP---HFEAKQGSVIAFENQVLYG 721
Query: 475 CEILYERMKSLGPDVP-ELIILPVYSALPS-EMQTR 508
+++ R GP P E + + SAL ++QT+
Sbjct: 722 LTVVHRRRVQYGPINPVEAREIFIRSALAEGQLQTK 757
Score = 39 (18.8 bits), Expect = 8.2e-11, Sum P(2) = 8.2e-11
Identities = 10/41 (24%), Positives = 21/41 (51%)
Query: 514 PPGSRKVVIATNIAETSLTIDGIFYVVDPFDIEVRQAKYHR 554
P +R++ I + +AE L F++ + +E +A H+
Sbjct: 737 PVEAREIFIRSALAEGQLQTKEAFFIANQKLLEDVEALEHK 777
>UNIPROTKB|Q608K8 [details] [associations]
symbol:MCA1482 "ATP-dependent helicase HrpA" species:243233
"Methylococcus capsulatus str. Bath" [GO:0008150
"biological_process" evidence=ND] InterPro:IPR001650
InterPro:IPR003593 InterPro:IPR007502 InterPro:IPR010222
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408
PROSITE:PS51194 SMART:SM00382 SMART:SM00490 SMART:SM00847
GO:GO:0005524 GO:GO:0003676 EMBL:AE017282 GenomeReviews:AE017282_GR
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 HOGENOM:HOG000247272 KO:K03578
OMA:TYQFEPG InterPro:IPR024590 Pfam:PF11898 TIGRFAMs:TIGR01967
RefSeq:YP_113939.1 ProteinModelPortal:Q608K8 GeneID:3104911
KEGG:mca:MCA1482 PATRIC:22606802 Uniprot:Q608K8
Length = 1294
Score = 207 (77.9 bits), Expect = 3.3e-12, Sum P(2) = 3.3e-12
Identities = 51/202 (25%), Positives = 94/202 (46%)
Query: 11 QMAEFPLEPNLSKMLIMSVHLQCSDEVLTIVSMLSVQNVFYRPXXXXXXXXXXXXXFNQM 70
++A P++P L ++L+ C EV IV+ LSV + RP F
Sbjct: 487 RLARLPVDPRLGRILLAGAEENCLSEVCIIVAALSVPDPRERPADKAQAADQKHARFRHP 546
Query: 71 EGDHITLLAVYNSWRNNK--FSNA----WCYENFVQIRTLKRAQDVRKQLLGIMDRHK-L 123
+ D + +LA++N + + S + +C +NF+ ++ +D+ +Q+L ++ L
Sbjct: 547 DSDFMAILALWNDYEEQRQHLSGSKLRQYCRDNFLSALRMREWRDIHQQILEVVKGELGL 606
Query: 124 DVVSAGKNTVRVQKAVCSGFFRNAAKKDPQEGYRTLVDSQVVYIHPSSALFNRQPEWVIY 183
+ + +A+ +G + + Q Y V Q I P S LF +P W+I
Sbjct: 607 RPNQVPADYGEIHRALLTGLLCHVGFRQDQNEY-VGVRGQKFQIFPGSFLFKTRPVWIIS 665
Query: 184 HELVQTTKEYMREVTSIDPKWL 205
E V+T++ Y R V I+P+W+
Sbjct: 666 AEQVETSRVYARTVARIEPEWI 687
Score = 200 (75.5 bits), Expect = 1.9e-19, Sum P(2) = 1.9e-19
Identities = 47/124 (37%), Positives = 73/124 (58%)
Query: 231 EPLQRTNRISFPPGLLKQAVKKRPEIKLIVTSATLDAVKFSSYFFEAPIFTIPGRTFPVE 290
E +R+ I F G LK + +R ++KL++TSAT+D +FS +F API +PGRT+PVE
Sbjct: 195 EAHERSLNIDFLLGYLKWLLPRRHDLKLVITSATIDPERFSRHFDNAPIVRVPGRTYPVE 254
Query: 291 VLY----TKEPETDYLD-----ASLITVMQIHLREPPGDVLLFLTGKLDVRKQLLGIMDR 341
+ Y + E E+D + A L V ++H RE GD+L+FL+G+ ++R +
Sbjct: 255 IRYRPPDSAEEESDETERGEQQAILDAVDELH-RENTGDILIFLSGEREIRDTAESLRKH 313
Query: 342 HKLD 345
H D
Sbjct: 314 HPAD 317
Score = 120 (47.3 bits), Expect = 1.9e-19, Sum P(2) = 1.9e-19
Identities = 25/48 (52%), Positives = 35/48 (72%)
Query: 494 ILPVYSALPSEMQTRIFEAAPPGSRKVVIATNIAETSLTIDGIFYVVD 541
+LP+YS L Q +IF+ P G R++V+ATN+AETSLT+ GI V+D
Sbjct: 320 VLPLYSRLTVSEQEKIFK--PHGRRRIVLATNVAETSLTVPGIRGVID 365
Score = 110 (43.8 bits), Expect = 3.5e-18, Sum P(3) = 3.5e-18
Identities = 33/123 (26%), Positives = 55/123 (44%)
Query: 356 VQKAVCSGFFRNAAKKDPQEGYRTLVDSQVVYIHPSSALFNRQPEWVIYHELVQTTKEYM 415
+ +A+ +G + + Q Y V Q I P S LF +P W+I E V+T++ Y
Sbjct: 618 IHRALLTGLLCHVGFRQDQNEY-VGVRGQKFQIFPGSFLFKTRPVWIISAEQVETSRVYA 676
Query: 416 REVTSIDPKWLVEFAPAFFK--FSDPTKLSKFKKNQRLE--PLYNKYEEPNAWRISREEI 471
R V I+P+W+ + K + +P K + E LY + N ++ E +
Sbjct: 677 RTVARIEPEWIEKCGAHLLKRHYYEPHWERKAARGAVFERTALYGLTVQ-NGRKVPYENV 735
Query: 472 DTA 474
D A
Sbjct: 736 DPA 738
Score = 43 (20.2 bits), Expect = 3.5e-18, Sum P(3) = 3.5e-18
Identities = 10/31 (32%), Positives = 18/31 (58%)
Query: 471 IDTACEILYERMKSLGPDVPELIILPVYSAL 501
+ A E+LY ++ G D+ E ++ V +AL
Sbjct: 1086 VTPASELLYRQLSPAGRDLREDLLDRVMAAL 1116
>MGI|MGI:2136388 [details] [associations]
symbol:Dqx1 "DEAQ RNA-dependent ATPase" species:10090 "Mus
musculus" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0005575 "cellular_component" evidence=ND]
[GO:0005634 "nucleus" evidence=IEA] [GO:0006200 "ATP catabolic
process" evidence=ISA] [GO:0016787 "hydrolase activity"
evidence=IEA] [GO:0016887 "ATPase activity" evidence=ISA]
InterPro:IPR001650 InterPro:IPR007502 Pfam:PF04408 PROSITE:PS51194
SMART:SM00847 MGI:MGI:2136388 GO:GO:0005524 GO:GO:0005634
GO:GO:0003676 GO:GO:0016887 GO:GO:0004386 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709
Pfam:PF07717 HOGENOM:HOG000175261 GeneTree:ENSGT00650000093246
HOVERGEN:HBG039428 CTD:165545 KO:K14433 OMA:CGQAVQA
OrthoDB:EOG4548Z3 EMBL:AF318278 EMBL:BC048936 EMBL:BC075680
IPI:IPI00125675 IPI:IPI00844713 RefSeq:NP_291084.1
UniGene:Mm.140332 ProteinModelPortal:Q924H9 SMR:Q924H9
PhosphoSite:Q924H9 PRIDE:Q924H9 Ensembl:ENSMUST00000077502
GeneID:93838 KEGG:mmu:93838 UCSC:uc009cmc.1 UCSC:uc009cmd.1
InParanoid:Q924H9 NextBio:351693 Bgee:Q924H9 CleanEx:MM_DQX1
Genevestigator:Q924H9 Uniprot:Q924H9
Length = 718
Score = 263 (97.6 bits), Expect = 2.0e-19, P = 2.0e-19
Identities = 69/230 (30%), Positives = 110/230 (47%)
Query: 12 MAEFPLEPNLSKMLIMSVHLQCSDEVLTIVSMLSVQNVFYRPXXXXXXXXXXXXXFNQME 71
++EFPL P L+K L+ S C DE+LT+ +ML+ F RP +
Sbjct: 465 LSEFPLPPELAKALLASCEFNCVDEMLTLAAMLTAAPGFTRPPLSAGEAALRRA-LEHAD 523
Query: 72 GDHITLLAVYNSWRNNKFSNAWCYENFVQIRTLKRAQDVRKQLLGIMDRHKLDV----VS 127
GDH +L+ VY ++ + AWC + +L +A+ +R +L+ +M R +L +
Sbjct: 524 GDHSSLIQVYEAFVQSGADEAWCQARGLNWESLCQARKLRAELVELMQRIELPLSQPAFG 583
Query: 128 AGKNTVRVQKAVCSGFFRNAAKKDPQEG-YRTLVDSQVVYIHPSSALFNRQ-----PEWV 181
+ +N +QKA+ SG+F A+ G Y L V + P + NR+ P WV
Sbjct: 584 SEQNRRDLQKALLSGYFLKVARDTDGTGNYLLLTHKHVAQLSPYCSYRNRRTPAQPPTWV 643
Query: 182 IYHELVQTTKEYMREVTSIDPKWLVEFAPAFFKFSDPTKLSKFKKNQRLE 231
+YH + + V+ I P+ LVE AP +F + P S+ NQ E
Sbjct: 644 LYHSFSISKDNCLCIVSEIQPEMLVELAPPYFLSNLPPSESRDLLNQLRE 693
Score = 125 (49.1 bits), Expect = 8.8e-08, Sum P(2) = 8.8e-08
Identities = 39/132 (29%), Positives = 62/132 (46%)
Query: 331 VRKQLLGIMDRHKLDV----VSAGKNTVRVQKAVCSGFFRNAAKKDPQEG-YRTLVDSQV 385
+R +L+ +M R +L + + +N +QKA+ SG+F A+ G Y L V
Sbjct: 562 LRAELVELMQRIELPLSQPAFGSEQNRRDLQKALLSGYFLKVARDTDGTGNYLLLTHKHV 621
Query: 386 VYIHPSSALFNRQ-----PEWVIYHELVQTTKEYMREVTSIDPKWLVEFAPAFFKFSDPT 440
+ P + NR+ P WV+YH + + V+ I P+ LVE AP +F + P
Sbjct: 622 AQLSPYCSYRNRRTPAQPPTWVLYHSFSISKDNCLCIVSEIQPEMLVELAPPYFLSNLPP 681
Query: 441 KLSKFKKNQRLE 452
S+ NQ E
Sbjct: 682 SESRDLLNQLRE 693
Score = 80 (33.2 bits), Expect = 8.8e-08, Sum P(2) = 8.8e-08
Identities = 22/80 (27%), Positives = 43/80 (53%)
Query: 254 PEIKLIVTSATLDAVKFSSYFFEAPIFTIPGRTFPVEVLYTKEP-ETDYLDASLITVMQI 312
P + ++VT L+ KF +++ +PI +P L K+ TD ++A+ V+++
Sbjct: 195 PRV-VVVTDPALEP-KFQAFWGNSPIVRVPREPGGDPTLAYKDTVPTDLVEAACQAVLEL 252
Query: 313 -HLREPPGDVLLFLTGKLDV 331
E PGDVL++L + ++
Sbjct: 253 CQQEEAPGDVLVYLPSEEEI 272
>UNIPROTKB|Q9KS77 [details] [associations]
symbol:VC1382 "ATP-dependent helicase HrpA" species:243277
"Vibrio cholerae O1 biovar El Tor str. N16961" [GO:0004386
"helicase activity" evidence=ISS] [GO:0008152 "metabolic process"
evidence=ISS] InterPro:IPR001650 InterPro:IPR003593
InterPro:IPR007502 InterPro:IPR010222 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS51194
SMART:SM00382 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GenomeReviews:AE003852_GR GO:GO:0003676 GO:GO:0004386
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 KO:K03578 OMA:TYQFEPG
ProtClustDB:PRK11131 InterPro:IPR024590 Pfam:PF11898
TIGRFAMs:TIGR01967 EMBL:AE004217 PIR:F82207 RefSeq:NP_231026.2
ProteinModelPortal:Q9KS77 DNASU:2614836 GeneID:2614836
KEGG:vch:VC1382 PATRIC:20081832 Uniprot:Q9KS77
Length = 1309
Score = 209 (78.6 bits), Expect = 4.2e-13, P = 4.2e-13
Identities = 59/218 (27%), Positives = 104/218 (47%)
Query: 11 QMAEFPLEPNLSKMLIMSVHLQCSDEVLTIVSMLSVQNVFYRPXXXXXXXXXXXXXFNQM 70
Q+A P++P L++M++ + L C EV+ I S LS+Q+ RP FN
Sbjct: 503 QLARLPIDPRLARMVLEASKLGCLKEVMIIASALSIQDPRERPSDKQQSADDKHRRFNHE 562
Query: 71 EGDHITLLAVYN-------SWRNNKFSNAWCYENFVQIRTLKRAQDVRKQLLGIMDRHKL 123
+ D +TL+ +++ + +N+F C +++ ++ QDV QL
Sbjct: 563 DSDFLTLVNLWHYIGQQQKALTSNQFRRQ-CKLDYLNYLRVREWQDVYTQLHQSTREMGF 621
Query: 124 DVVSAGKNTVRVQKAVCSGFFRNAAKKDPQEG-YRTLVDSQVVYIHPSSALFNRQPEWVI 182
+ + V A+ G + KD ++ Y +++ I P+S LF +QP+WV+
Sbjct: 622 KLNDEPGSYHAVHSAILVGLLSHIGMKDQEKNEYHGARNARF-NIFPASGLFKKQPKWVM 680
Query: 183 YHELVQTTKEYMREVTSIDPKWLVEFAPAFFK--FSDP 218
ELV+T+K + R V I+P W+ A K +S+P
Sbjct: 681 SAELVETSKLWARVVAKIEPDWIEPLAKHLSKRSYSEP 718
Score = 187 (70.9 bits), Expect = 2.3e-19, Sum P(2) = 2.3e-19
Identities = 44/122 (36%), Positives = 69/122 (56%)
Query: 231 EPLQRTNRISFPPGLLKQAVKKRPEIKLIVTSATLDAVKFSSYFFEAPIFTIPGRTFPVE 290
E +R+ I F G LKQ + +RP++K+I+TSAT+D +FS +F API + GRT+PVE
Sbjct: 208 EAHERSLNIDFILGYLKQLLPRRPDLKVIITSATIDPERFSKHFSNAPIIEVSGRTYPVE 267
Query: 291 VLYT-------KEPETDYLDASLITVMQIHLREPPGDVLLFLTGKLDVRKQLLGIMDRHK 343
V Y E + D L+ V ++ E GD+L+F+ G+ ++R + R+
Sbjct: 268 VRYRPLAGDDDSESDRDQLEGIFQAVDEL-CDEGLGDILIFMNGEREIRDTADALSKRNL 326
Query: 344 LD 345
D
Sbjct: 327 RD 328
Score = 133 (51.9 bits), Expect = 2.3e-19, Sum P(2) = 2.3e-19
Identities = 26/59 (44%), Positives = 40/59 (67%)
Query: 494 ILPVYSALPSEMQTRIFEAAPPGSRKVVIATNIAETSLTIDGIFYVVDPFDIEVRQAKY 552
I+P+Y+ L + Q +IF+ P R++V+ATN+AETSLT+ GI YV+DP + + Y
Sbjct: 331 IVPLYARLSAGEQNKIFQ--PHAGRRIVLATNVAETSLTVPGIKYVIDPGTARISRYSY 387
Score = 122 (48.0 bits), Expect = 3.3e-18, Sum P(2) = 3.3e-18
Identities = 29/87 (33%), Positives = 47/87 (54%)
Query: 356 VQKAVCSGFFRNAAKKDPQEG-YRTLVDSQVVYIHPSSALFNRQPEWVIYHELVQTTKEY 414
V A+ G + KD ++ Y +++ I P+S LF +QP+WV+ ELV+T+K +
Sbjct: 633 VHSAILVGLLSHIGMKDQEKNEYHGARNARF-NIFPASGLFKKQPKWVMSAELVETSKLW 691
Query: 415 MREVTSIDPKWLVEFAPAFFK--FSDP 439
R V I+P W+ A K +S+P
Sbjct: 692 ARVVAKIEPDWIEPLAKHLSKRSYSEP 718
Score = 38 (18.4 bits), Expect = 1.7e-09, Sum P(2) = 1.7e-09
Identities = 14/38 (36%), Positives = 19/38 (50%)
Query: 357 QKAVCSGFFRNAAKKDPQEGYRTLVDSQVVY--IHPSS 392
QKA+ S FR K D Y + + Q VY +H S+
Sbjct: 580 QKALTSNQFRRQCKLD-YLNYLRVREWQDVYTQLHQST 616
>TIGR_CMR|VC_1382 [details] [associations]
symbol:VC_1382 "ATP-dependent helicase HrpA" species:686
"Vibrio cholerae O1 biovar El Tor" [GO:0004386 "helicase activity"
evidence=ISS] [GO:0008152 "metabolic process" evidence=ISS]
InterPro:IPR001650 InterPro:IPR003593 InterPro:IPR007502
InterPro:IPR010222 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS51194 SMART:SM00382 SMART:SM00490
SMART:SM00847 GO:GO:0005524 GenomeReviews:AE003852_GR GO:GO:0003676
GO:GO:0004386 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026 KO:K03578 OMA:TYQFEPG
ProtClustDB:PRK11131 InterPro:IPR024590 Pfam:PF11898
TIGRFAMs:TIGR01967 EMBL:AE004217 PIR:F82207 RefSeq:NP_231026.2
ProteinModelPortal:Q9KS77 DNASU:2614836 GeneID:2614836
KEGG:vch:VC1382 PATRIC:20081832 Uniprot:Q9KS77
Length = 1309
Score = 209 (78.6 bits), Expect = 4.2e-13, P = 4.2e-13
Identities = 59/218 (27%), Positives = 104/218 (47%)
Query: 11 QMAEFPLEPNLSKMLIMSVHLQCSDEVLTIVSMLSVQNVFYRPXXXXXXXXXXXXXFNQM 70
Q+A P++P L++M++ + L C EV+ I S LS+Q+ RP FN
Sbjct: 503 QLARLPIDPRLARMVLEASKLGCLKEVMIIASALSIQDPRERPSDKQQSADDKHRRFNHE 562
Query: 71 EGDHITLLAVYN-------SWRNNKFSNAWCYENFVQIRTLKRAQDVRKQLLGIMDRHKL 123
+ D +TL+ +++ + +N+F C +++ ++ QDV QL
Sbjct: 563 DSDFLTLVNLWHYIGQQQKALTSNQFRRQ-CKLDYLNYLRVREWQDVYTQLHQSTREMGF 621
Query: 124 DVVSAGKNTVRVQKAVCSGFFRNAAKKDPQEG-YRTLVDSQVVYIHPSSALFNRQPEWVI 182
+ + V A+ G + KD ++ Y +++ I P+S LF +QP+WV+
Sbjct: 622 KLNDEPGSYHAVHSAILVGLLSHIGMKDQEKNEYHGARNARF-NIFPASGLFKKQPKWVM 680
Query: 183 YHELVQTTKEYMREVTSIDPKWLVEFAPAFFK--FSDP 218
ELV+T+K + R V I+P W+ A K +S+P
Sbjct: 681 SAELVETSKLWARVVAKIEPDWIEPLAKHLSKRSYSEP 718
Score = 187 (70.9 bits), Expect = 2.3e-19, Sum P(2) = 2.3e-19
Identities = 44/122 (36%), Positives = 69/122 (56%)
Query: 231 EPLQRTNRISFPPGLLKQAVKKRPEIKLIVTSATLDAVKFSSYFFEAPIFTIPGRTFPVE 290
E +R+ I F G LKQ + +RP++K+I+TSAT+D +FS +F API + GRT+PVE
Sbjct: 208 EAHERSLNIDFILGYLKQLLPRRPDLKVIITSATIDPERFSKHFSNAPIIEVSGRTYPVE 267
Query: 291 VLYT-------KEPETDYLDASLITVMQIHLREPPGDVLLFLTGKLDVRKQLLGIMDRHK 343
V Y E + D L+ V ++ E GD+L+F+ G+ ++R + R+
Sbjct: 268 VRYRPLAGDDDSESDRDQLEGIFQAVDEL-CDEGLGDILIFMNGEREIRDTADALSKRNL 326
Query: 344 LD 345
D
Sbjct: 327 RD 328
Score = 133 (51.9 bits), Expect = 2.3e-19, Sum P(2) = 2.3e-19
Identities = 26/59 (44%), Positives = 40/59 (67%)
Query: 494 ILPVYSALPSEMQTRIFEAAPPGSRKVVIATNIAETSLTIDGIFYVVDPFDIEVRQAKY 552
I+P+Y+ L + Q +IF+ P R++V+ATN+AETSLT+ GI YV+DP + + Y
Sbjct: 331 IVPLYARLSAGEQNKIFQ--PHAGRRIVLATNVAETSLTVPGIKYVIDPGTARISRYSY 387
Score = 122 (48.0 bits), Expect = 3.3e-18, Sum P(2) = 3.3e-18
Identities = 29/87 (33%), Positives = 47/87 (54%)
Query: 356 VQKAVCSGFFRNAAKKDPQEG-YRTLVDSQVVYIHPSSALFNRQPEWVIYHELVQTTKEY 414
V A+ G + KD ++ Y +++ I P+S LF +QP+WV+ ELV+T+K +
Sbjct: 633 VHSAILVGLLSHIGMKDQEKNEYHGARNARF-NIFPASGLFKKQPKWVMSAELVETSKLW 691
Query: 415 MREVTSIDPKWLVEFAPAFFK--FSDP 439
R V I+P W+ A K +S+P
Sbjct: 692 ARVVAKIEPDWIEPLAKHLSKRSYSEP 718
Score = 38 (18.4 bits), Expect = 1.7e-09, Sum P(2) = 1.7e-09
Identities = 14/38 (36%), Positives = 19/38 (50%)
Query: 357 QKAVCSGFFRNAAKKDPQEGYRTLVDSQVVY--IHPSS 392
QKA+ S FR K D Y + + Q VY +H S+
Sbjct: 580 QKALTSNQFRRQCKLD-YLNYLRVREWQDVYTQLHQST 616
>UNIPROTKB|Q3ZBE0 [details] [associations]
symbol:DQX1 "ATP-dependent RNA helicase DQX1" species:9913
"Bos taurus" [GO:0005634 "nucleus" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] InterPro:IPR007502 Pfam:PF04408 PROSITE:PS51194
SMART:SM00847 GO:GO:0005524 GO:GO:0005634 GO:GO:0004386
PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
HOGENOM:HOG000175261 GeneTree:ENSGT00650000093246
HOVERGEN:HBG039428 EMBL:BC103411 IPI:IPI00704154
RefSeq:NP_001030399.1 UniGene:Bt.49583 PRIDE:Q3ZBE0
Ensembl:ENSBTAT00000033191 GeneID:517947 KEGG:bta:517947 CTD:165545
InParanoid:Q3ZBE0 KO:K14433 OMA:CGQAVQA OrthoDB:EOG4548Z3
NextBio:20872543 Uniprot:Q3ZBE0
Length = 719
Score = 262 (97.3 bits), Expect = 2.6e-19, P = 2.6e-19
Identities = 71/236 (30%), Positives = 114/236 (48%)
Query: 12 MAEFPLEPNLSKMLIMSVHLQCSDEVLTIVSMLSVQNVFYRPXXXXXXXXXXXXXFNQME 71
++EFPL P L+K L+ S C DE+LT+ +ML+ F RP ++
Sbjct: 467 LSEFPLAPELAKALLASCEFDCVDEMLTLAAMLTAAPGFTRPPVCAEEAALRRA-LEHVD 525
Query: 72 GDHITLLAVYNSWRNNKFSNAWCYENFVQIRTLKRAQDVRKQLLGIMDRHKLDV----VS 127
GDH +L+ VY ++ + AWC + L +A+ +R +LL +M R +L +
Sbjct: 526 GDHSSLIQVYEAFIQSGADKAWCQARGLNWAALCQARKLRGELLELMQRIELPLSQPAFG 585
Query: 128 AGKNTVRVQKAVCSGFFRNAAKKDPQEG-YRTLVDSQVVYIHPSSALFNRQ-----PEWV 181
+ +N +QKA+ SG+F A+ G Y L V + P+ +R+ P WV
Sbjct: 586 SERNRRDLQKALVSGYFLKVARDTDGTGNYLLLTHKHVAQLSPNCCYRSRRAPARPPLWV 645
Query: 182 IYHELVQTTKEYMREVTSIDPKWLVEFAPAFFKFSDPTKLSKFKKNQRLEPLQRTN 237
+YH + + V+ I P+ LVE AP +F + P S+ NQ E +RT+
Sbjct: 646 LYHSFSISKDNCLSIVSEIQPQMLVELAPPYFLSNLPPSESRDFLNQLRE--ERTD 699
Score = 131 (51.2 bits), Expect = 5.1e-08, Sum P(2) = 5.1e-08
Identities = 44/158 (27%), Positives = 74/158 (46%)
Query: 331 VRKQLLGIMDRHKLDV----VSAGKNTVRVQKAVCSGFFRNAAKKDPQEG-YRTLVDSQV 385
+R +LL +M R +L + + +N +QKA+ SG+F A+ G Y L V
Sbjct: 564 LRGELLELMQRIELPLSQPAFGSERNRRDLQKALVSGYFLKVARDTDGTGNYLLLTHKHV 623
Query: 386 VYIHPSSALFNRQ-----PEWVIYHELVQTTKEYMREVTSIDPKWLVEFAPAFFKFSDPT 440
+ P+ +R+ P WV+YH + + V+ I P+ LVE AP +F + P
Sbjct: 624 AQLSPNCCYRSRRAPARPPLWVLYHSFSISKDNCLSIVSEIQPQMLVELAPPYFLSNLPP 683
Query: 441 KLSKFKKNQ-RLEPLYNKYEEPNAWRISREEIDTACEI 477
S+ NQ R E + ++ S +E++ AC +
Sbjct: 684 SESRDFLNQLREERTDSSIRSESS---STQELENACAL 718
Score = 105 (42.0 bits), Expect = 3.2e-05, Sum P(2) = 3.2e-05
Identities = 26/82 (31%), Positives = 45/82 (54%)
Query: 467 SREEIDTACEILYERMKSLGPDVPELIILPVYSALPSEMQTRIFEAAPPGSRKVVIATNI 526
S EEI CE L +++SL P +LP++ +Q ++E G+RKVV+ +
Sbjct: 270 SEEEISLCCESLSRKVRSLENQGPPPRVLPLHPGCGQAVQA-VYEDTESGARKVVVTHWL 328
Query: 527 AETSLTIDGIFYVVDPFDIEVR 548
A+ S ++ I +V+D +E+R
Sbjct: 329 ADFSFSLPSIRHVIDS-GLELR 349
Score = 76 (31.8 bits), Expect = 5.1e-08, Sum P(2) = 5.1e-08
Identities = 26/93 (27%), Positives = 48/93 (51%)
Query: 244 GLLKQA-VKKRP-EIKLIV-TSATLDAVKFSSYFFEAPIFTIPGRT--FPVEVLYTKEPE 298
GLL+ A + P +++++V T +L+ K ++ P +P +T P V Y
Sbjct: 184 GLLRDARLGSLPGDLRVVVVTDPSLEP-KLQDFWGGPPTVCVPRKTGSCPTPV-YRDSLP 241
Query: 299 TDYLDASLITVMQIHLREPPGDVLLFLTGKLDV 331
D +DA+ V++ E PGDVL++L + ++
Sbjct: 242 ADRVDAACQAVLEWCQEEAPGDVLVYLPSEEEI 274
>RGD|1591766 [details] [associations]
symbol:Dqx1 "DEAQ box RNA-dependent ATPase 1" species:10116
"Rattus norvegicus" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR007502 Pfam:PF04408 PROSITE:PS51194 SMART:SM00847
RGD:1591766 GO:GO:0005524 GO:GO:0003676 GO:GO:0004386
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 EMBL:CH473957
InterPro:IPR011709 Pfam:PF07717 GeneTree:ENSGT00650000093246
CTD:165545 KO:K14433 OMA:CGQAVQA OrthoDB:EOG4548Z3 IPI:IPI00194915
RefSeq:NP_001102877.1 UniGene:Rn.154059 Ensembl:ENSRNOT00000011002
GeneID:680434 KEGG:rno:680434 UCSC:RGD:1591766 NextBio:718702
Uniprot:D4A474
Length = 717
Score = 259 (96.2 bits), Expect = 5.6e-19, P = 5.6e-19
Identities = 69/230 (30%), Positives = 107/230 (46%)
Query: 12 MAEFPLEPNLSKMLIMSVHLQCSDEVLTIVSMLSVQNVFYRPXXXXXXXXXXXXXFNQME 71
++EFPL P L+K L+ S C DE+LT+ +ML+ F RP +
Sbjct: 465 LSEFPLPPELAKALLASCEFNCVDEMLTLAAMLTAAPGFTRPPLCAGEAALRRG-LEHAD 523
Query: 72 GDHITLLAVYNSWRNNKFSNAWCYENFVQIRTLKRAQDVRKQLLGIMDRHKLDV----VS 127
GDH +L+ VY ++ + WC + L +A+ +R +LL +M R +L +
Sbjct: 524 GDHSSLIQVYEAFVQSGADETWCQARGLSWEALCQARKLRAELLELMQRIELPLSLPAFG 583
Query: 128 AGKNTVRVQKAVCSGFFRNAAKKDPQEG-YRTLVDSQVVYIHPSSALFNRQ-----PEWV 181
+ +N +QKA+ SG+F A+ G Y L V + P NR+ P WV
Sbjct: 584 SEQNRRDLQKALLSGYFLKVARDTDGTGNYLLLTHKHVAQLSPYCVYRNRRTPAQPPTWV 643
Query: 182 IYHELVQTTKEYMREVTSIDPKWLVEFAPAFFKFSDPTKLSKFKKNQRLE 231
+YH + + V+ I P+ LVE AP +F + P S+ NQ E
Sbjct: 644 LYHRFSISKDNCLCTVSEIQPEMLVELAPPYFLSNLPPSESRDLLNQLRE 693
Score = 129 (50.5 bits), Expect = 1.1e-07, Sum P(2) = 1.1e-07
Identities = 40/132 (30%), Positives = 61/132 (46%)
Query: 331 VRKQLLGIMDRHKLDV----VSAGKNTVRVQKAVCSGFFRNAAKKDPQEG-YRTLVDSQV 385
+R +LL +M R +L + + +N +QKA+ SG+F A+ G Y L V
Sbjct: 562 LRAELLELMQRIELPLSLPAFGSEQNRRDLQKALLSGYFLKVARDTDGTGNYLLLTHKHV 621
Query: 386 VYIHPSSALFNRQ-----PEWVIYHELVQTTKEYMREVTSIDPKWLVEFAPAFFKFSDPT 440
+ P NR+ P WV+YH + + V+ I P+ LVE AP +F + P
Sbjct: 622 AQLSPYCVYRNRRTPAQPPTWVLYHRFSISKDNCLCTVSEIQPEMLVELAPPYFLSNLPP 681
Query: 441 KLSKFKKNQRLE 452
S+ NQ E
Sbjct: 682 SESRDLLNQLRE 693
Score = 75 (31.5 bits), Expect = 1.1e-07, Sum P(2) = 1.1e-07
Identities = 22/80 (27%), Positives = 43/80 (53%)
Query: 254 PEIKLIVTSATLDAVKFSSYFFEAPIFTIPGRTFPVEVLYTKEP-ETDYLDASLITVMQI 312
P + +IVT + L+ KF +++ +P +P L K+ D ++A+ V+++
Sbjct: 195 PRV-VIVTDSALEP-KFQAFWGNSPTVHVPREPGENPTLTYKDTVPADLVEAACQAVLEL 252
Query: 313 HLREP-PGDVLLFLTGKLDV 331
RE PGDVL++L + ++
Sbjct: 253 CQREEAPGDVLVYLPSEEEI 272
>WB|WBGene00020263 [details] [associations]
symbol:T05E8.3 species:6239 "Caenorhabditis elegans"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0040010 "positive regulation of growth rate"
evidence=IMP] [GO:0040035 "hermaphrodite genitalia development"
evidence=IMP] [GO:0000003 "reproduction" evidence=IMP] [GO:0007413
"axonal fasciculation" evidence=IMP] [GO:0040011 "locomotion"
evidence=IMP] [GO:0006898 "receptor-mediated endocytosis"
evidence=IMP] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 GO:GO:0005524 GO:GO:0006898 GO:GO:0040010
GO:GO:0040011 GO:GO:0003676 GO:GO:0040035 GO:GO:0007413
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026 HOGENOM:HOG000175261
GeneTree:ENSGT00700000104241 EMBL:FO080463 PIR:T29623
RefSeq:NP_491604.3 ProteinModelPortal:O01598 SMR:O01598
STRING:O01598 PaxDb:O01598 EnsemblMetazoa:T05E8.3 GeneID:172199
KEGG:cel:CELE_T05E8.3 UCSC:T05E8.3 CTD:172199 WormBase:T05E8.3
InParanoid:O01598 OMA:KEGCIME NextBio:874451 Uniprot:O01598
Length = 856
Score = 170 (64.9 bits), Expect = 6.6e-19, Sum P(2) = 6.6e-19
Identities = 40/98 (40%), Positives = 58/98 (59%)
Query: 245 LLKQAVKKRPE----IKLIVTSATLDAVKFSSYFFEAPIFTIPGRTFPVEVLYTKEP--- 297
+L+Q +R E ++LI+ SATL A KF SYF A + + GRTFP+EV +
Sbjct: 296 ILRQCQDQRRETNNPLRLIIMSATLQAEKFQSYFNNAKVVLVAGRTFPIEVFHVNPKINK 355
Query: 298 ---ETDYLDASLITVMQIHLREPPG-DVLLFLTGKLDV 331
TDY+ ++I V +HL EP G D+L+FLTG ++
Sbjct: 356 SFSSTDYVYNAVICVKYVHLTEPKGRDILVFLTGSEEI 393
Score = 168 (64.2 bits), Expect = 3.7e-10, Sum P(3) = 3.7e-10
Identities = 36/121 (29%), Positives = 67/121 (55%)
Query: 87 NKFSNAWCYENFVQIRTLKRAQDVRKQLLGIMDRHKLDVVSAGKNTVRVQKAVCSGFFRN 146
N+ +C +N + + LK A + +QL I K+ + G + ++++KA+ G F N
Sbjct: 695 NQTIRKFCNDNMINEQHLKTASMIEEQLKQIAIEQKVTFSTCGADFMKMRKALALGMFLN 754
Query: 147 AAKKDPQEG-YRTLVDSQVVY-IHPSSALFNRQPEWVIYHELVQTTKEYMREVTSIDPKW 204
+ + D QE YR +++ + IHPSS L +P ++++ EL++T + +VT ID W
Sbjct: 755 SCEYDRQEDRYRLMINPAITLKIHPSSCLSRSKPAYIVFSELMKTNDLFALQVTLIDGDW 814
Query: 205 L 205
+
Sbjct: 815 V 815
Score = 152 (58.6 bits), Expect = 3.8e-07, P = 3.8e-07
Identities = 59/238 (24%), Positives = 111/238 (46%)
Query: 324 FLTGKLDVRKQLLG-IMDRHKLDVVS-AGKNTVRVQKAVCSGFFRNAAKKDPQEGYRTLV 381
++T + +RK L+ ++D++ ++ A + ++ +C +++ R ++
Sbjct: 256 YMTDGIVLRKALVSPLLDKYSCVIIDEAHERSLHSDVLMCILRQCQDQRRETNNPLRLII 315
Query: 382 DSQVVYIHPSSALFNRQPEWVIYHELVQTTKEYMREVTSIDPKWLVEFAPAFFKFSDPTK 441
S + + FN V+ LV + + EV ++PK F+ + ++
Sbjct: 316 MSATLQAEKFQSYFNNAK--VV---LV-AGRTFPIEVFHVNPKINKSFSSTDYVYN---A 366
Query: 442 LSKFKKNQRLEPLYNKYEEPNAWRISREEIDTACEILYERMKSLGPDVPELIILPVYSAL 501
+ K EP K + + EEI+ L E SL L+ +P+Y+AL
Sbjct: 367 VICVKYVHLTEP---KGRDILVFLTGSEEIEAVASQLAELNGSLPASADVLMPVPLYAAL 423
Query: 502 PSEMQTRIFEAAPPGSRKVVIATNIAETSLTIDGIFYVVDPFDIEVRQAK-YHRCAVV 558
E Q F P G+RKV+I+TNIAETS+TI GI V+D ++ ++ + ++R V+
Sbjct: 424 RPEKQKEAFRKTPQGARKVIISTNIAETSVTIPGIRVVIDSGKVKTKRFEAFNRIDVL 481
Score = 142 (55.0 bits), Expect = 6.6e-19, Sum P(2) = 6.6e-19
Identities = 30/98 (30%), Positives = 56/98 (57%)
Query: 331 VRKQLLGIMDRHKLDVVSAGKNTVRVQKAVCSGFFRNAAKKDPQEG-YRTLVDSQVVY-I 388
+ +QL I K+ + G + ++++KA+ G F N+ + D QE YR +++ + I
Sbjct: 718 IEEQLKQIAIEQKVTFSTCGADFMKMRKALALGMFLNSCEYDRQEDRYRLMINPAITLKI 777
Query: 389 HPSSALFNRQPEWVIYHELVQTTKEYMREVTSIDPKWL 426
HPSS L +P ++++ EL++T + +VT ID W+
Sbjct: 778 HPSSCLSRSKPAYIVFSELMKTNDLFALQVTLIDGDWV 815
Score = 64 (27.6 bits), Expect = 3.7e-10, Sum P(3) = 3.7e-10
Identities = 18/66 (27%), Positives = 28/66 (42%)
Query: 15 FPLEPNLSKMLIMSVHLQCSDEVLTIVSMLSVQNVFYRPXXXXXXXXXXXXX--FNQMEG 72
+PL P+ +++L + C E + IV+ + +F F EG
Sbjct: 595 YPLPPDHARILFQAQKEGCIMEAIKIVAAMQTDALFSGAGDSKSDADVDRIRRRFETREG 654
Query: 73 DHITLL 78
DHITLL
Sbjct: 655 DHITLL 660
Score = 38 (18.4 bits), Expect = 3.7e-10, Sum P(3) = 3.7e-10
Identities = 7/20 (35%), Positives = 15/20 (75%)
Query: 405 HELVQTTKEYMREVTSIDPK 424
+ L +TT E ++++T ++PK
Sbjct: 828 NHLAETT-ERVQQITRLEPK 846
Score = 37 (18.1 bits), Expect = 5.2e-05, Sum P(2) = 5.2e-05
Identities = 7/21 (33%), Positives = 13/21 (61%)
Query: 297 PETDYLDASLITVMQIHLREP 317
PETD ++A+L+ + + P
Sbjct: 555 PETDNINAALLELTSLGAIRP 575
>ZFIN|ZDB-GENE-061207-30 [details] [associations]
symbol:dhx34 "DEAH (Asp-Glu-Ala-His) box polypeptide
34" species:7955 "Danio rerio" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005622 "intracellular"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0000184 "nuclear-transcribed mRNA catabolic process,
nonsense-mediated decay" evidence=IMP] [GO:0009790 "embryo
development" evidence=IMP] [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
InterPro:IPR001650 InterPro:IPR007502 InterPro:IPR015880
Pfam:PF00271 Pfam:PF04408 PROSITE:PS51194 SMART:SM00355
SMART:SM00490 SMART:SM00847 ZFIN:ZDB-GENE-061207-30 GO:GO:0005524
GO:GO:0000184 GO:GO:0008270 GO:GO:0003676 GO:GO:0005622
GO:GO:0009790 GO:GO:0004386 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
CTD:9704 HOGENOM:HOG000232193 OMA:DSDQVFH OrthoDB:EOG4GB75B
GeneTree:ENSGT00700000104421 HOVERGEN:HBG051355 EMBL:BX908775
IPI:IPI00503372 RefSeq:NP_001121805.1 UniGene:Dr.50626
Ensembl:ENSDART00000086943 GeneID:555838 KEGG:dre:555838
InParanoid:A2BIE5 NextBio:20881188 Uniprot:A2BIE5
Length = 1150
Score = 161 (61.7 bits), Expect = 1.2e-18, Sum P(2) = 1.2e-18
Identities = 38/109 (34%), Positives = 63/109 (57%)
Query: 234 QRTNRISFPPGLLKQAVKKRPEIKLIVTSATLDAVKFSSYFFEAPIFTIPGRTFPVEVLY 293
+R F G+L+ + RP+++L++ SAT++ FSSYF +AP+ +PGR FP++V+Y
Sbjct: 283 ERHLHCDFLLGVLRSLLSLRPDLRLVLMSATINIKLFSSYFNDAPVLQVPGRLFPIQVIY 342
Query: 294 TKEPETDYLDAS-------LITVMQ-IHLREPP---GDVLLFLTGKLDV 331
P + + S + V+Q I R P GD+LLFL+G ++
Sbjct: 343 QPIPPEEQVSRSEKLDPRPYLRVLQGIDQRYPQEERGDLLLFLSGVAEI 391
Score = 152 (58.6 bits), Expect = 1.2e-18, Sum P(2) = 1.2e-18
Identities = 28/49 (57%), Positives = 39/49 (79%)
Query: 493 IILPVYSALPSEMQTRIFEAAPPGSRKVVIATNIAETSLTIDGIFYVVD 541
I+LP++S L Q ++F+ APPG RK +I+TNIAETS+TIDG+ +VVD
Sbjct: 409 IVLPLHSTLSLAQQDKVFDIAPPGVRKCIISTNIAETSVTIDGVRFVVD 457
Score = 38 (18.4 bits), Expect = 7.7e-07, Sum P(2) = 7.7e-07
Identities = 6/12 (50%), Positives = 9/12 (75%)
Query: 465 RISREEIDTACE 476
R+SR E++ CE
Sbjct: 976 RVSRRELEKLCE 987
Score = 38 (18.4 bits), Expect = 7.1e-06, Sum P(2) = 7.1e-06
Identities = 7/21 (33%), Positives = 15/21 (71%)
Query: 440 TKLSKFKKNQRLEPLYNKYEE 460
+KLSK ++ Q+ P++ +Y +
Sbjct: 150 SKLSKLRREQKSLPIF-QYRD 169
>UNIPROTKB|Q14147 [details] [associations]
symbol:DHX34 "Probable ATP-dependent RNA helicase DHX34"
species:9606 "Homo sapiens" [GO:0005622 "intracellular"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0003723 "RNA binding" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] InterPro:IPR001650 InterPro:IPR007502
InterPro:IPR011545 InterPro:IPR015880 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00355
SMART:SM00490 SMART:SM00847 GO:GO:0005524 GO:GO:0008270
GO:GO:0003723 GO:GO:0005622 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 EMBL:D50924 EMBL:AC008754 EMBL:AK297692
IPI:IPI00382739 RefSeq:NP_055496.2 UniGene:Hs.151706
ProteinModelPortal:Q14147 SMR:Q14147 IntAct:Q14147
PhosphoSite:Q14147 DMDM:311033371 PaxDb:Q14147 PRIDE:Q14147
DNASU:9704 Ensembl:ENST00000328771 GeneID:9704 KEGG:hsa:9704
UCSC:uc010xyn.2 CTD:9704 GeneCards:GC19P047853 HGNC:HGNC:16719
HPA:HPA042159 HPA:HPA043558 neXtProt:NX_Q14147 PharmGKB:PA27221
HOGENOM:HOG000232193 OMA:DSDQVFH OrthoDB:EOG4GB75B PhylomeDB:Q14147
ChiTaRS:DHX34 GenomeRNAi:9704 NextBio:36469 Bgee:Q14147
CleanEx:HS_DHX34 Genevestigator:Q14147 GermOnline:ENSG00000134815
Uniprot:Q14147
Length = 1143
Score = 158 (60.7 bits), Expect = 2.6e-18, Sum P(2) = 2.6e-18
Identities = 38/99 (38%), Positives = 62/99 (62%)
Query: 244 GLLKQAVKKRPEIKLIVTSATLDAVKFSSYFFEAPIFTIPGRTFPVEVLYTK---EPET- 299
G+L++ + RP++K+I+ SAT++ FSSYF AP+ +PGR FP+ V+Y EP T
Sbjct: 293 GVLQRLLPTRPDLKVILMSATINISLFSSYFSNAPVVQVPGRLFPITVVYQPQEAEPTTS 352
Query: 300 --DYLDAS-LITVMQ-IHLREPP---GDVLLFLTGKLDV 331
+ LD + V++ I + PP GD+L+FL+G ++
Sbjct: 353 KSEKLDPRPFLRVLESIDHKYPPEERGDLLVFLSGMAEI 391
Score = 152 (58.6 bits), Expect = 2.6e-18, Sum P(2) = 2.6e-18
Identities = 28/49 (57%), Positives = 40/49 (81%)
Query: 493 IILPVYSALPSEMQTRIFEAAPPGSRKVVIATNIAETSLTIDGIFYVVD 541
++LP++SAL Q ++F+ APPG RK +++TNIAETS+TIDGI +VVD
Sbjct: 409 VVLPLHSALSVADQDKVFDVAPPGVRKCILSTNIAETSVTIDGIRFVVD 457
Score = 138 (53.6 bits), Expect = 1.8e-05, P = 1.8e-05
Identities = 36/127 (28%), Positives = 59/127 (46%)
Query: 3 SLVVTPI-SQMAEFPLEPNLSKMLIMSVHLQCSDEVLTIVSMLSVQNVFYRPXXXXXXXX 61
S +TPI S +A+ P++ + KMLI+ + VLTI + LSVQ+ F R
Sbjct: 570 SEALTPIGSLLAQLPVDVVIGKMLILGSMFSLVEPVLTIAAALSVQSPFTRSAQSSPECA 629
Query: 62 XXXXXFNQMEGDHITLLAVYNSW-----RNNKFSNAWCYENFVQIRTLKRAQDVRKQLLG 116
+GD TL V+N+W ++ S WC ++ L ++R+Q
Sbjct: 630 AARRPLESDQGDPFTLFNVFNAWVQVKSERSRNSRKWCRRRGIEEHRLYEMANLRRQFKE 689
Query: 117 IMDRHKL 123
+++ H L
Sbjct: 690 LLEDHGL 696
>UNIPROTKB|Q8TE96 [details] [associations]
symbol:DQX1 "ATP-dependent RNA helicase DQX1" species:9606
"Homo sapiens" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR001650 InterPro:IPR007502 Pfam:PF04408 PROSITE:PS51194
SMART:SM00847 GO:GO:0005524 GO:GO:0005634 GO:GO:0003676
GO:GO:0004386 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717 HOGENOM:HOG000175261
EMBL:AC005041 HOVERGEN:HBG039428 CTD:165545 KO:K14433 OMA:CGQAVQA
OrthoDB:EOG4548Z3 EMBL:AK074337 EMBL:AK092420 EMBL:BC075018
IPI:IPI00385794 IPI:IPI00843897 IPI:IPI00844595 RefSeq:NP_598376.2
UniGene:Hs.191705 ProteinModelPortal:Q8TE96 SMR:Q8TE96
STRING:Q8TE96 PhosphoSite:Q8TE96 DMDM:145558898 PaxDb:Q8TE96
PRIDE:Q8TE96 Ensembl:ENST00000393951 Ensembl:ENST00000404568
GeneID:165545 KEGG:hsa:165545 UCSC:uc010yrw.2 GeneCards:GC02M074745
H-InvDB:HIX0200286 HGNC:HGNC:20410 HPA:HPA039158 neXtProt:NX_Q8TE96
PharmGKB:PA134916600 InParanoid:Q8TE96 GenomeRNAi:165545
NextBio:88548 ArrayExpress:Q8TE96 Bgee:Q8TE96 CleanEx:HS_DQX1
Genevestigator:Q8TE96 Uniprot:Q8TE96
Length = 717
Score = 253 (94.1 bits), Expect = 2.6e-18, P = 2.6e-18
Identities = 69/230 (30%), Positives = 106/230 (46%)
Query: 12 MAEFPLEPNLSKMLIMSVHLQCSDEVLTIVSMLSVQNVFYRPXXXXXXXXXXXXXFNQME 71
++EFPL P L+K L+ S C DE+LT+ +ML+ F RP +
Sbjct: 465 LSEFPLAPELAKALLASCEFDCVDEMLTLAAMLTAAPGFTRPPLSAEEAALRRA-LEHTD 523
Query: 72 GDHITLLAVYNSWRNNKFSNAWCYENFVQIRTLKRAQDVRKQLLGIMDRHKLDV----VS 127
GDH +L+ VY ++ + AWC + L +A +R +LL +M R +L +
Sbjct: 524 GDHSSLIQVYEAFIQSGADEAWCQARGLNWAALCQAHKLRGELLELMQRIELPLSLPAFG 583
Query: 128 AGKNTVRVQKAVCSGFFRNAAKKDPQEG-YRTLVDSQVVYI-----HPSSALFNRQPEWV 181
+ +N +QKA+ SG+F A+ G Y L V + + S R P WV
Sbjct: 584 SEQNRRDLQKALVSGYFLKVARDTDGTGNYLLLTHKHVAQLSSYCCYRSRRAPARPPPWV 643
Query: 182 IYHELVQTTKEYMREVTSIDPKWLVEFAPAFFKFSDPTKLSKFKKNQRLE 231
+YH + + V+ I P+ LVE AP +F + P S+ NQ E
Sbjct: 644 LYHNFTISKDNCLSIVSEIQPQMLVELAPPYFLSNLPPSESRDLLNQLRE 693
Score = 118 (46.6 bits), Expect = 3.1e-07, Sum P(2) = 3.1e-07
Identities = 39/132 (29%), Positives = 60/132 (45%)
Query: 331 VRKQLLGIMDRHKLDV----VSAGKNTVRVQKAVCSGFFRNAAKKDPQEG-YRTLVDSQV 385
+R +LL +M R +L + + +N +QKA+ SG+F A+ G Y L V
Sbjct: 562 LRGELLELMQRIELPLSLPAFGSEQNRRDLQKALVSGYFLKVARDTDGTGNYLLLTHKHV 621
Query: 386 VYI-----HPSSALFNRQPEWVIYHELVQTTKEYMREVTSIDPKWLVEFAPAFFKFSDPT 440
+ + S R P WV+YH + + V+ I P+ LVE AP +F + P
Sbjct: 622 AQLSSYCCYRSRRAPARPPPWVLYHNFTISKDNCLSIVSEIQPQMLVELAPPYFLSNLPP 681
Query: 441 KLSKFKKNQRLE 452
S+ NQ E
Sbjct: 682 SESRDLLNQLRE 693
Score = 82 (33.9 bits), Expect = 3.1e-07, Sum P(2) = 3.1e-07
Identities = 27/93 (29%), Positives = 52/93 (55%)
Query: 244 GLLKQA-VKKRP-EIKLIV-TSATLDAVKFSSYFFEAPIFTIPGRTF--PVEVLYTKEPE 298
GLL+ A ++K P +++++V T L+ K +++ PI IP P + + P
Sbjct: 184 GLLQDARLEKLPGDLRVVVVTDPALEP-KLRAFWGNPPIVHIPREPGERPSPIYWDTIPP 242
Query: 299 TDYLDASLITVMQIHLREPPGDVLLFLTGKLDV 331
D ++A+ V+++ +E PGDVL+FL + ++
Sbjct: 243 -DRVEAACQAVLELCRKELPGDVLVFLPSEEEI 274
>DICTYBASE|DDB_G0287351 [details] [associations]
symbol:dhx37 "DEAD/DEAH box helicase" species:44689
"Dictyostelium discoideum" [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0042254 "ribosome biogenesis"
evidence=ISS] [GO:0005732 "small nucleolar ribonucleoprotein
complex" evidence=ISS] [GO:0005730 "nucleolus" evidence=ISS]
[GO:0003724 "RNA helicase activity" evidence=ISS] [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 dictyBase:DDB_G0287351
GO:GO:0005524 GO:GO:0005730 GenomeReviews:CM000154_GR GO:GO:0003676
GO:GO:0042254 EMBL:AAFI02000100 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 GO:GO:0003724 KO:K14780 GO:GO:0005732
RefSeq:XP_637255.1 STRING:Q54KG8 EnsemblProtists:DDB0235265
GeneID:8626085 KEGG:ddi:DDB_G0287351 InParanoid:Q54KG8 OMA:HERNLNT
Uniprot:Q54KG8
Length = 1461
Score = 171 (65.3 bits), Expect = 3.1e-18, Sum P(2) = 3.1e-18
Identities = 43/99 (43%), Positives = 59/99 (59%)
Query: 456 NKYEEPNAWRISREEIDTACEILYERMKSLGPDVPELIILPVYSALPSEMQTRIFEAAPP 515
N E+ + + I +E+I T + K GP L +LP+YS LP+ Q R+F+ P
Sbjct: 819 NNNEDEDEFEIGKEDIITE-----DDEKPAGP----LFVLPLYSTLPTSKQMRVFQTPPL 869
Query: 516 GSRKVVIATNIAETSLTIDGIFYVVDPFDIEVRQAKYHR 554
GSR VV+ATN+AETSLTI I YVVD V+Q Y++
Sbjct: 870 GSRLVVVATNLAETSLTIPNIKYVVDTG--RVKQRYYNK 906
Score = 140 (54.3 bits), Expect = 3.1e-18, Sum P(2) = 3.1e-18
Identities = 44/138 (31%), Positives = 69/138 (50%)
Query: 256 IKLIVTSATL---DAVKFSSYFFEAP-IFTIPGRTFPVEVLYTKEPE-TDYLDASLITVM 310
+KL+V SATL D K + F P + IP R FPV + + K+ E +Y+D V+
Sbjct: 580 LKLVVMSATLRVEDFTKNKTLFSRPPPVINIPTRQFPVTIHFNKKTELVNYIDECYKKVV 639
Query: 311 QIHLREPPGDVLLFLTGKLDVRKQLLGIMDRHKLDVVSAGKN-TVRVQKAVCSGFFRNAA 369
+IH P G +L+F+TGK ++ + L + R + + K+ V + K + F
Sbjct: 640 KIHKNLPSGGILVFVTGKQEI-EYLCSKL-RRAFPIKAINKSFKVEIDK-INQQF----- 691
Query: 370 KKDPQEGYRTLVDSQVVY 387
K D QE + S +VY
Sbjct: 692 KSDDQENQNNIKSSNLVY 709
Score = 108 (43.1 bits), Expect = 1.5e-11, Sum P(2) = 1.5e-11
Identities = 20/42 (47%), Positives = 31/42 (73%)
Query: 387 YIHPSSAL--FNRQPEWVIYHELVQTTKEYMREVTSIDPKWL 426
+IHP+S L N Q E+VIY ++++T++ YM+ VT I+P WL
Sbjct: 1259 FIHPTSNLGGVNTQAEYVIYCDIIETSRPYMKLVTEINPSWL 1300
Score = 108 (43.1 bits), Expect = 2.3e-06, Sum P(3) = 2.3e-06
Identities = 20/42 (47%), Positives = 31/42 (73%)
Query: 166 YIHPSSAL--FNRQPEWVIYHELVQTTKEYMREVTSIDPKWL 205
+IHP+S L N Q E+VIY ++++T++ YM+ VT I+P WL
Sbjct: 1259 FIHPTSNLGGVNTQAEYVIYCDIIETSRPYMKLVTEINPSWL 1300
Score = 82 (33.9 bits), Expect = 2.3e-06, Sum P(3) = 2.3e-06
Identities = 15/42 (35%), Positives = 28/42 (66%)
Query: 11 QMAEFPLEPNLSKMLIMSVHLQCSDEVLTIVSMLSVQNVFYR 52
+M++FP+ P SKML++ C ++ IVS+L+V++ F +
Sbjct: 1019 KMSQFPVSPRHSKMLLLGQEHNCLPYIIAIVSILTVKDPFLK 1060
Score = 54 (24.1 bits), Expect = 2.3e-06, Sum P(3) = 2.3e-06
Identities = 16/67 (23%), Positives = 35/67 (52%)
Query: 71 EGDHITLLAVYNSW-----RNNKFSNAWCYENFVQIRTLKRAQDVRKQLLGIMD-----R 120
E D +++L V ++ ++ K + +C +NF+ +++ +R QL I++
Sbjct: 1117 ESDLLSILKVVGAYDYQIRKSPKDIDHFCSQNFLNTKSMSEIHKLRHQLTEIVNSINQTN 1176
Query: 121 HKLDVVS 127
H+LD +S
Sbjct: 1177 HELDPIS 1183
>UNIPROTKB|E2QXW1 [details] [associations]
symbol:DQX1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0004386 "helicase activity" evidence=IEA]
InterPro:IPR007502 Pfam:PF04408 SMART:SM00847 GO:GO:0004386
InterPro:IPR014001 SMART:SM00487 InterPro:IPR011709 Pfam:PF07717
GeneTree:ENSGT00650000093246 CTD:165545 KO:K14433 OMA:CGQAVQA
EMBL:AAEX03010965 RefSeq:XP_532994.2 Ensembl:ENSCAFT00000013395
GeneID:475784 KEGG:cfa:475784 NextBio:20851558 Uniprot:E2QXW1
Length = 719
Score = 251 (93.4 bits), Expect = 4.3e-18, P = 4.3e-18
Identities = 67/230 (29%), Positives = 107/230 (46%)
Query: 12 MAEFPLEPNLSKMLIMSVHLQCSDEVLTIVSMLSVQNVFYRPXXXXXXXXXXXXXFNQME 71
++EFPL P L+K L+ S C DE+LT+ +ML+ F P +
Sbjct: 467 LSEFPLPPELAKALLASCEFDCVDEMLTLAAMLTAAPGFTHPPLSAEEAALRRA-LEHAD 525
Query: 72 GDHITLLAVYNSWRNNKFSNAWCYENFVQIRTLKRAQDVRKQLLGIMDRHKLDV----VS 127
GDH +L+ VY ++ + AWC + L +AQ +R +LL +M + +L +
Sbjct: 526 GDHSSLIQVYEAFIQSGADEAWCQARGLNWAALCQAQKLRGELLELMQQIELPLSQPAFG 585
Query: 128 AGKNTVRVQKAVCSGFFRNAAKKDPQEG-YRTLVDSQVVYIHPSSALFNRQ-----PEWV 181
+ +N +QKA+ SG+F A+ G Y L V + P +R+ P WV
Sbjct: 586 SEQNRRDLQKALVSGYFLKVARDTDGTGNYLLLTHKHVAQLSPYCCYRSRRSPARSPPWV 645
Query: 182 IYHELVQTTKEYMREVTSIDPKWLVEFAPAFFKFSDPTKLSKFKKNQRLE 231
+YH + + V+ I P+ LVE AP +F + P S+ N+ E
Sbjct: 646 LYHSFSISKDNCLSIVSEIQPQMLVELAPPYFLSNLPPSESRDLLNELRE 695
Score = 120 (47.3 bits), Expect = 3.2e-06, Sum P(2) = 3.2e-06
Identities = 42/155 (27%), Positives = 69/155 (44%)
Query: 331 VRKQLLGIMDRHKLDV----VSAGKNTVRVQKAVCSGFFRNAAKKDPQEG-YRTLVDSQV 385
+R +LL +M + +L + + +N +QKA+ SG+F A+ G Y L V
Sbjct: 564 LRGELLELMQQIELPLSQPAFGSEQNRRDLQKALVSGYFLKVARDTDGTGNYLLLTHKHV 623
Query: 386 VYIHPSSALFNRQ-----PEWVIYHELVQTTKEYMREVTSIDPKWLVEFAPAFFKFSDPT 440
+ P +R+ P WV+YH + + V+ I P+ LVE AP +F + P
Sbjct: 624 AQLSPYCCYRSRRSPARSPPWVLYHSFSISKDNCLSIVSEIQPQMLVELAPPYFLSNLPP 683
Query: 441 KLSKFKKNQRLEPLYNKYEEPNAWRISREEIDTAC 475
S+ N+ E + E + S +E AC
Sbjct: 684 SESRDLLNELREETTDSSIESES--PSTQEFGDAC 716
Score = 70 (29.7 bits), Expect = 3.2e-06, Sum P(2) = 3.2e-06
Identities = 21/76 (27%), Positives = 40/76 (52%)
Query: 258 LIVTSATLDAVKFSSYFFEAPIFTIP-GR-TFPVEVLYTKEPETDYLDASLITVMQIHLR 315
++VT L+ K +++ I +P G P V Y TD ++A+ V+++ +
Sbjct: 201 VVVTDPALEP-KLQAFWGNPTIVHVPRGPGACPTPV-YRDIVPTDRVEAACQAVLELCAK 258
Query: 316 EPPGDVLLFLTGKLDV 331
E PGDVL++L + ++
Sbjct: 259 EAPGDVLVYLPSEEEI 274
>UNIPROTKB|F1RLY9 [details] [associations]
symbol:DHX34 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005524 "ATP binding" evidence=IEA] [GO:0008270 "zinc
ion binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0005622 "intracellular" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR007502 InterPro:IPR011545 InterPro:IPR015880
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS51194
SMART:SM00355 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0008270 GO:GO:0003676 GO:GO:0005622 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 CTD:9704 OMA:DSDQVFH GeneTree:ENSGT00700000104421
EMBL:FP102420 RefSeq:XP_003127294.1 Ensembl:ENSSSCT00000003454
GeneID:100515780 KEGG:ssc:100515780 Uniprot:F1RLY9
Length = 1146
Score = 157 (60.3 bits), Expect = 5.4e-18, Sum P(2) = 5.4e-18
Identities = 36/99 (36%), Positives = 62/99 (62%)
Query: 244 GLLKQAVKKRPEIKLIVTSATLDAVKFSSYFFEAPIFTIPGRTFPVEVLYTK---EPETD 300
G+L++ + +RP++K+I+ SAT++ FS+YF +AP+ +PGR FP+ V+Y EP
Sbjct: 293 GVLQRLLPRRPDLKVILMSATVNTSLFSAYFGQAPVVQVPGRLFPITVVYQPQEAEPTAS 352
Query: 301 YLDA----SLITVMQ-IHLREPP---GDVLLFLTGKLDV 331
L+ I V++ I + PP GD+L+FL+G ++
Sbjct: 353 TLEKLDPRPFIRVLEAIDSKYPPEERGDLLVFLSGLAEI 391
Score = 150 (57.9 bits), Expect = 5.4e-18, Sum P(2) = 5.4e-18
Identities = 27/49 (55%), Positives = 39/49 (79%)
Query: 493 IILPVYSALPSEMQTRIFEAAPPGSRKVVIATNIAETSLTIDGIFYVVD 541
++LP++S L Q ++F+ APPG RK +++TNIAETS+TIDGI +VVD
Sbjct: 409 VVLPLHSTLSVAAQDKVFDVAPPGVRKCILSTNIAETSVTIDGIRFVVD 457
Score = 130 (50.8 bits), Expect = 0.00013, P = 0.00013
Identities = 38/128 (29%), Positives = 61/128 (47%)
Query: 3 SLVVTPI-SQMAEFPLEPNLSKMLIMSVHLQCSDEVLTIVSMLSVQNVFYRPXXXXXXXX 61
S +TPI S +A+ P++ + KML++ L ++ VLTI + LSVQ+ F R
Sbjct: 570 SEALTPIGSLLAQLPVDIVIGKMLVLGSVLHLAEPVLTIAAALSVQSPFTR--STRSNPK 627
Query: 62 XXXXXFNQMEGDHITLLAVYNSW------RNNKFSNAWCYENFVQIRTLKRAQDVRKQLL 115
GD TL V+N+W R+ K S WC ++ L ++R+Q
Sbjct: 628 CAWRALESDHGDPFTLFNVFNNWVQVKSDRSTK-SRRWCRREGIEEHRLYEMANLRRQFK 686
Query: 116 GIMDRHKL 123
+++ H L
Sbjct: 687 ELLEDHGL 694
>UNIPROTKB|F1NH89 [details] [associations]
symbol:LOC768812 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] InterPro:IPR001650 PROSITE:PS51194
GO:GO:0005524 GO:GO:0003676 GO:GO:0004386 InterPro:IPR014001
PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717
GeneTree:ENSGT00650000093246 OMA:LACEQDI EMBL:AADN02057061
EMBL:AADN02057062 IPI:IPI00683398 Ensembl:ENSGALT00000023318
Uniprot:F1NH89
Length = 764
Score = 247 (92.0 bits), Expect = 1.3e-17, P = 1.3e-17
Identities = 66/208 (31%), Positives = 103/208 (49%)
Query: 33 CSDEVLTIVSMLSVQNVF-YRPXXXXXXXXXXXXXFNQMEGDHITLLAVYNSWRNNKFSN 91
C EVL I +L N F + P F+ GDH TL+ V+N++R ++
Sbjct: 514 CHTEVLPIHVLLHAPNCFLHTPSGTEEIALTCWRKFSHPAGDHFTLINVFNAFREASTNS 573
Query: 92 A--------WCYENFVQIRTLKRAQDVRKQLLGIMDRHKLDVVS----AGKNTVRVQKAV 139
A WC F+ L+ A+ +R +L+ IM R +L + + + +NT+ ++KA+
Sbjct: 574 AGQCCSNEKWCRNYFLSCSALRMAEMIRAELVEIMKRIELPISAPDFGSPENTLSIKKAL 633
Query: 140 CSGFFRNAAKK-DPQEGYRTLVDSQVVYIHPSSALF--NRQPEWVIYHELVQTTKEYMRE 196
SG+F A+ D Y L QV +HP S+ + R PEWV++HE + +R
Sbjct: 634 LSGYFMQIARDVDGSGNYLMLTHRQVAKLHPFSSYYYTRRSPEWVLFHEFSISEDNSIRV 693
Query: 197 VTSIDPKWLVEFAPAFFKFSD-PTKLSK 223
V+ I P VE AP ++ FS+ P SK
Sbjct: 694 VSEISPHLFVELAPQYY-FSNLPPSESK 720
Score = 165 (63.1 bits), Expect = 9.5e-15, Sum P(2) = 9.5e-15
Identities = 42/122 (34%), Positives = 67/122 (54%)
Query: 331 VRKQLLGIMDRHKLDVVS----AGKNTVRVQKAVCSGFFRNAAKK-DPQEGYRTLVDSQV 385
+R +L+ IM R +L + + + +NT+ ++KA+ SG+F A+ D Y L QV
Sbjct: 600 IRAELVEIMKRIELPISAPDFGSPENTLSIKKALLSGYFMQIARDVDGSGNYLMLTHRQV 659
Query: 386 VYIHPSSALF--NRQPEWVIYHELVQTTKEYMREVTSIDPKWLVEFAPAFFKFSD-PTKL 442
+HP S+ + R PEWV++HE + +R V+ I P VE AP ++ FS+ P
Sbjct: 660 AKLHPFSSYYYTRRSPEWVLFHEFSISEDNSIRVVSEISPHLFVELAPQYY-FSNLPPSE 718
Query: 443 SK 444
SK
Sbjct: 719 SK 720
Score = 106 (42.4 bits), Expect = 9.5e-15, Sum P(2) = 9.5e-15
Identities = 22/90 (24%), Positives = 47/90 (52%)
Query: 244 GLLKQAVKKRPEIKLIVTSATLDAVKFSSYFFEAPIFTIPGRTFPVEVLYTKEPETDYLD 303
G+LK ++ RP ++L++ +A + K + P+ + EV+YT D+
Sbjct: 209 GVLKHVLRARPALRLVILTAPHMSSKLQDFCGSVPLIRVENE-HQAEVVYTCSMPKDHFL 267
Query: 304 ASLITVMQIHLREPPGDVLLFLTGKLDVRK 333
++L + ++H + GD+++FL + D+ K
Sbjct: 268 SALRLLFELHHTKEKGDIVIFLACEQDIDK 297
Score = 74 (31.1 bits), Expect = 4.6e-05, Sum P(2) = 4.6e-05
Identities = 20/77 (25%), Positives = 40/77 (51%)
Query: 469 EEIDTACEILYERMKSLGPDVPELIILPVYSA----LPSEMQTRIFEAAPPGSRKVVIAT 524
++ID A +++ + + PD+ ELI +P+Y +P Q + + RKV++ T
Sbjct: 293 QDIDKAYQMIRQEQSNSNPDLGELIPVPLYPTRNDLIPKPNQDKQ-KCYQKYRRKVLLTT 351
Query: 525 NIAETSLTIDGIFYVVD 541
+ + + I I +V+D
Sbjct: 352 SSGGSLIRIKNITFVID 368
Score = 39 (18.8 bits), Expect = 8.0e-08, Sum P(2) = 8.0e-08
Identities = 9/24 (37%), Positives = 12/24 (50%)
Query: 163 QVVYIHPSSALFNRQPEWVIYHEL 186
Q++ PS LF PE Y E+
Sbjct: 401 QILSTSPSGKLFCLYPEEFTYKEM 424
>CGD|CAL0004556 [details] [associations]
symbol:orf19.2090 species:5476 "Candida albicans" [GO:0030686
"90S preribosome" evidence=IEA] [GO:0032040 "small-subunit
processome" evidence=IEA] [GO:0005730 "nucleolus" evidence=IEA]
[GO:0005739 "mitochondrion" evidence=IEA] [GO:0000462 "maturation
of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA,
LSU-rRNA)" evidence=IEA] [GO:0003724 "RNA helicase activity"
evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 CGD:CAL0004556 GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026 EMBL:AACQ01000031
EMBL:AACQ01000030 KO:K14780 RefSeq:XP_719536.1 RefSeq:XP_719660.1
STRING:Q5ACX7 GeneID:3638741 GeneID:3638820 KEGG:cal:CaO19.2090
KEGG:cal:CaO19.9637 Uniprot:Q5ACX7
Length = 1263
Score = 173 (66.0 bits), Expect = 3.0e-17, Sum P(2) = 3.0e-17
Identities = 37/73 (50%), Positives = 49/73 (67%)
Query: 469 EEIDTACEILYERMKSLGPDVPELIILPVYSALPSEMQTRIFEAAPPGSRKVVIATNIAE 528
EE + E E + S +V L +LP+YS LP++ Q ++FE PPGSR ++ATN+AE
Sbjct: 748 EENEEEEEGFEESIDSKESEVGPLYVLPLYSLLPTKQQMKVFEDPPPGSRICIVATNVAE 807
Query: 529 TSLTIDGIFYVVD 541
TSLTI GI YVVD
Sbjct: 808 TSLTIPGIRYVVD 820
Score = 127 (49.8 bits), Expect = 3.0e-17, Sum P(2) = 3.0e-17
Identities = 28/80 (35%), Positives = 45/80 (56%)
Query: 256 IKLIVTSATLDAVKFSSY--FFEAP--IFTIPGRTFPVEVLYTKEPETDYLDASLITVMQ 311
+KLI+ SATL FS F+ P I + R +PV + + K+ DYL+ + +
Sbjct: 610 LKLIIMSATLRVSDFSENPALFKTPPPIINVQARQYPVSIHFNKKTNYDYLEEAFKKTCK 669
Query: 312 IHLREPPGDVLLFLTGKLDV 331
IH + P G +L+FLTG+ ++
Sbjct: 670 IHRKLPEGGILIFLTGQNEI 689
>MGI|MGI:1918973 [details] [associations]
symbol:Dhx34 "DEAH (Asp-Glu-Ala-His) box polypeptide 34"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0003723 "RNA binding" evidence=IEA] [GO:0004386 "helicase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005575 "cellular_component" evidence=ND] [GO:0005622
"intracellular" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0008150 "biological_process"
evidence=ND] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0016787 "hydrolase activity" evidence=IEA] InterPro:IPR001650
InterPro:IPR007502 InterPro:IPR011545 InterPro:IPR015880
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00355 SMART:SM00490 SMART:SM00847
MGI:MGI:1918973 GO:GO:0005524 GO:GO:0008270 GO:GO:0003723
GO:GO:0005622 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
CTD:9704 HOGENOM:HOG000232193 ChiTaRS:DHX34 EMBL:AK129062
EMBL:AK004733 IPI:IPI00113303 RefSeq:NP_082159.3 UniGene:Mm.75259
ProteinModelPortal:Q9DBV3 SMR:Q9DBV3 PhosphoSite:Q9DBV3
PaxDb:Q9DBV3 PRIDE:Q9DBV3 Ensembl:ENSMUST00000094816
Ensembl:ENSMUST00000163968 GeneID:71723 KEGG:mmu:71723
GeneTree:ENSGT00700000104421 HOVERGEN:HBG051355 NextBio:334335
Bgee:Q9DBV3 CleanEx:MM_DHX34 Genevestigator:Q9DBV3
GermOnline:ENSMUSG00000006019 Uniprot:Q9DBV3
Length = 1145
Score = 154 (59.3 bits), Expect = 3.8e-17, Sum P(2) = 3.8e-17
Identities = 35/99 (35%), Positives = 63/99 (63%)
Query: 244 GLLKQAVKKRPEIKLIVTSATLDAVKFSSYFFEAPIFTIPGRTFPVEVLYTKEP------ 297
G+L++ + +RP++K+I+ SAT++ FSSYF AP+ +PGR FP+ V+Y +
Sbjct: 295 GVLQRLLPQRPDLKVILMSATINISLFSSYFSHAPVVQVPGRLFPITVVYQPQEADQTAS 354
Query: 298 ETDYLDAS-LITVMQ-IHLREPP---GDVLLFLTGKLDV 331
+++ LD + V++ I + PP GD+L+FL+G ++
Sbjct: 355 KSEKLDPRPFLRVLEAIDNKYPPEERGDLLVFLSGMAEI 393
Score = 149 (57.5 bits), Expect = 1.2e-06, P = 1.2e-06
Identities = 42/145 (28%), Positives = 71/145 (48%)
Query: 3 SLVVTPI-SQMAEFPLEPNLSKMLIMSVHLQCSDEVLTIVSMLSVQNVFYRPXXXXXXXX 61
S +TPI S +A+ P++ + KMLI+ ++ VLTI + LSVQ+ F R
Sbjct: 572 SEALTPIGSLLAQLPVDVVIGKMLILGSMFSLAEPVLTIAAALSVQSPFTRSAQSNLDCA 631
Query: 62 XXXXXFNQMEGDHITLLAVYNSW---RNNKFSNA--WCYENFVQIRTLKRAQDVRKQLLG 116
+GD TL V+N+W ++ + N+ WC V+ L ++R+Q
Sbjct: 632 TARRPLESDQGDPFTLFNVFNAWVQVKSERSGNSRKWCRRRGVEEHRLYEMANLRRQFKE 691
Query: 117 IMDRHKL----DVVSAGKNTVRVQK 137
+++ H L VV+ G + R+Q+
Sbjct: 692 LLEDHGLLSGAQVVAPGDSYSRLQQ 716
Score = 145 (56.1 bits), Expect = 3.8e-17, Sum P(2) = 3.8e-17
Identities = 27/49 (55%), Positives = 39/49 (79%)
Query: 493 IILPVYSALPSEMQTRIFEAAPPGSRKVVIATNIAETSLTIDGIFYVVD 541
++LP++SAL Q ++F+ AP G RK +++TNIAETS+TIDGI +VVD
Sbjct: 411 VVLPLHSALSVSDQDKVFDVAPAGVRKCILSTNIAETSVTIDGIRFVVD 459
Score = 38 (18.4 bits), Expect = 3.9e-05, Sum P(2) = 3.9e-05
Identities = 8/35 (22%), Positives = 18/35 (51%)
Query: 224 FKKNQRLEPLQRTNRISFPPGLLKQAVKKRPEIKL 258
F++ QR + L+ + + PG+ K + ++ L
Sbjct: 66 FERLQRFQHLKTSQKKKKDPGMPKHGIAALADLPL 100
>GENEDB_PFALCIPARUM|PF08_0042 [details] [associations]
symbol:PF08_0042 "ATP-dependent RNA helicase
prh1, putative" species:5833 "Plasmodium falciparum" [GO:0004004
"ATP-dependent RNA helicase activity" evidence=ISS]
InterPro:IPR001650 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS51194
SMART:SM00490 SMART:SM00847 GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709
Pfam:PF07717 GO:GO:0004004 HOGENOM:HOG000175261 KO:K01509
EMBL:AL844507 RefSeq:XP_001349312.1 ProteinModelPortal:Q8IB47
EnsemblProtists:PF08_0042:mRNA GeneID:2655493 KEGG:pfa:PF08_0042
EuPathDB:PlasmoDB:PF3D7_0821300 ProtClustDB:CLSZ2515096
Uniprot:Q8IB47
Length = 867
Score = 180 (68.4 bits), Expect = 5.9e-14, Sum P(2) = 5.9e-14
Identities = 47/153 (30%), Positives = 80/153 (52%)
Query: 71 EGDHITLLAVYNSWRNN--KFSNAWCYENFVQIRTLKRAQDVRKQLLGIMDRHKLDVVSA 128
+GDH+TLL ++ W+ K +C + L++ + ++ QLL IM ++K+ +
Sbjct: 712 DGDHLTLLHIFYLWQEADIKEKKHFCNIYALNNEILQQVEKIKIQLLEIM-KNKMKIEIP 770
Query: 129 GKNTV----RVQKAVCSGFFRNAAKKDPQEG-YRTLVDSQVVYIHPSSALFNR--QPEWV 181
K + ++ +C F N AK Y LV+ + IHPSS LFN +P ++
Sbjct: 771 KKLHMHKWDQILICLCKACFFNIAKSTSNTNVYINLVNKTKIRIHPSSTLFNSYIKPTFI 830
Query: 182 IYHELVQTTKEYMREVTSIDPKWLVEFAPAFFK 214
Y ++VQT + Y R VT I+ WL+++ A F+
Sbjct: 831 FYSDIVQTKRLYARIVTKIEADWLLKYVSAKFQ 863
Score = 154 (59.3 bits), Expect = 3.8e-17, Sum P(3) = 3.8e-17
Identities = 34/81 (41%), Positives = 54/81 (66%)
Query: 476 EILYERMKS-LGPD-VPELIILPVYSALPSEMQTRIFEAAPPGSRKVVIATNIAETSLTI 533
EI + K+ + PD + + IL +YS+LP++ Q IFE PP +RKV+++TNIAETS+TI
Sbjct: 382 EICFHFGKTEIMPDKIYNMKILQLYSSLPNKKQKVIFEPVPPNTRKVILSTNIAETSVTI 441
Query: 534 DGIFYVVDPFDIEVRQAKYHR 554
I YV+D ++++ +R
Sbjct: 442 PNIKYVIDSGKVKIKYFDVNR 462
Score = 139 (54.0 bits), Expect = 3.7e-14, Sum P(2) = 3.7e-14
Identities = 37/112 (33%), Positives = 60/112 (53%)
Query: 331 VRKQLLGIMDRHKLDVVSAGKNTV----RVQKAVCSGFFRNAAKKDPQEG-YRTLVDSQV 385
++ QLL IM ++K+ + K + ++ +C F N AK Y LV+
Sbjct: 753 IKIQLLEIM-KNKMKIEIPKKLHMHKWDQILICLCKACFFNIAKSTSNTNVYINLVNKTK 811
Query: 386 VYIHPSSALFNR--QPEWVIYHELVQTTKEYMREVTSIDPKWLVEFAPAFFK 435
+ IHPSS LFN +P ++ Y ++VQT + Y R VT I+ WL+++ A F+
Sbjct: 812 IRIHPSSTLFNSYIKPTFIFYSDIVQTKRLYARIVTKIEADWLLKYVSAKFQ 863
Score = 129 (50.5 bits), Expect = 3.8e-17, Sum P(3) = 3.8e-17
Identities = 33/98 (33%), Positives = 53/98 (54%)
Query: 216 SDPTKLSKFKKNQRLEPLQRTNRISFPPGLLKQAVKKRPEIKLIVTSATLDAVKFSSYFF 275
+DP L K+K E +R+ R G K ++KR +IK+I+ SAT D F+ +F
Sbjct: 132 NDPL-LKKYKFLILDEIHERSIRTDVLLGYTKILLQKRKKIKIILMSATFDINIFNQFFN 190
Query: 276 EAPIFTIPGRTFPVEVLYTKEPETDYLDASLITVMQIH 313
PI TIP + + + Y + DY+ + + T++QIH
Sbjct: 191 NPPIITIPHKLHKITIYYPRRNIEDYILSVVSTILQIH 228
Score = 84 (34.6 bits), Expect = 5.9e-14, Sum P(2) = 5.9e-14
Identities = 14/36 (38%), Positives = 24/36 (66%)
Query: 15 FPLEPNLSKMLIMSVHLQCSDEVLTIVSMLSVQNVF 50
FPL P + +L+ S+ C DE+ TIV++L+ ++F
Sbjct: 575 FPLNPIYANILLCSIEFNCIDEIATIVALLNCDSIF 610
Score = 57 (25.1 bits), Expect = 3.8e-17, Sum P(3) = 3.8e-17
Identities = 12/40 (30%), Positives = 25/40 (62%)
Query: 319 GDVLLFLTGKLDVRKQLLGIMDRHKLDVVSAGKNTVRVQK 358
GD+L+FL G+ ++ +++ IM + KL ++ G ++ K
Sbjct: 317 GDILVFLPGQEEI--EMVNIMLKEKLKIIYKGNLLNKLMK 354
>UNIPROTKB|Q8IB47 [details] [associations]
symbol:PF08_0042 "ATP-dependent RNA helicase prh1,
putative" species:36329 "Plasmodium falciparum 3D7" [GO:0004004
"ATP-dependent RNA helicase activity" evidence=ISS]
InterPro:IPR001650 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS51194
SMART:SM00490 SMART:SM00847 GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709
Pfam:PF07717 GO:GO:0004004 HOGENOM:HOG000175261 KO:K01509
EMBL:AL844507 RefSeq:XP_001349312.1 ProteinModelPortal:Q8IB47
EnsemblProtists:PF08_0042:mRNA GeneID:2655493 KEGG:pfa:PF08_0042
EuPathDB:PlasmoDB:PF3D7_0821300 ProtClustDB:CLSZ2515096
Uniprot:Q8IB47
Length = 867
Score = 180 (68.4 bits), Expect = 5.9e-14, Sum P(2) = 5.9e-14
Identities = 47/153 (30%), Positives = 80/153 (52%)
Query: 71 EGDHITLLAVYNSWRNN--KFSNAWCYENFVQIRTLKRAQDVRKQLLGIMDRHKLDVVSA 128
+GDH+TLL ++ W+ K +C + L++ + ++ QLL IM ++K+ +
Sbjct: 712 DGDHLTLLHIFYLWQEADIKEKKHFCNIYALNNEILQQVEKIKIQLLEIM-KNKMKIEIP 770
Query: 129 GKNTV----RVQKAVCSGFFRNAAKKDPQEG-YRTLVDSQVVYIHPSSALFNR--QPEWV 181
K + ++ +C F N AK Y LV+ + IHPSS LFN +P ++
Sbjct: 771 KKLHMHKWDQILICLCKACFFNIAKSTSNTNVYINLVNKTKIRIHPSSTLFNSYIKPTFI 830
Query: 182 IYHELVQTTKEYMREVTSIDPKWLVEFAPAFFK 214
Y ++VQT + Y R VT I+ WL+++ A F+
Sbjct: 831 FYSDIVQTKRLYARIVTKIEADWLLKYVSAKFQ 863
Score = 154 (59.3 bits), Expect = 3.8e-17, Sum P(3) = 3.8e-17
Identities = 34/81 (41%), Positives = 54/81 (66%)
Query: 476 EILYERMKS-LGPD-VPELIILPVYSALPSEMQTRIFEAAPPGSRKVVIATNIAETSLTI 533
EI + K+ + PD + + IL +YS+LP++ Q IFE PP +RKV+++TNIAETS+TI
Sbjct: 382 EICFHFGKTEIMPDKIYNMKILQLYSSLPNKKQKVIFEPVPPNTRKVILSTNIAETSVTI 441
Query: 534 DGIFYVVDPFDIEVRQAKYHR 554
I YV+D ++++ +R
Sbjct: 442 PNIKYVIDSGKVKIKYFDVNR 462
Score = 139 (54.0 bits), Expect = 3.7e-14, Sum P(2) = 3.7e-14
Identities = 37/112 (33%), Positives = 60/112 (53%)
Query: 331 VRKQLLGIMDRHKLDVVSAGKNTV----RVQKAVCSGFFRNAAKKDPQEG-YRTLVDSQV 385
++ QLL IM ++K+ + K + ++ +C F N AK Y LV+
Sbjct: 753 IKIQLLEIM-KNKMKIEIPKKLHMHKWDQILICLCKACFFNIAKSTSNTNVYINLVNKTK 811
Query: 386 VYIHPSSALFNR--QPEWVIYHELVQTTKEYMREVTSIDPKWLVEFAPAFFK 435
+ IHPSS LFN +P ++ Y ++VQT + Y R VT I+ WL+++ A F+
Sbjct: 812 IRIHPSSTLFNSYIKPTFIFYSDIVQTKRLYARIVTKIEADWLLKYVSAKFQ 863
Score = 129 (50.5 bits), Expect = 3.8e-17, Sum P(3) = 3.8e-17
Identities = 33/98 (33%), Positives = 53/98 (54%)
Query: 216 SDPTKLSKFKKNQRLEPLQRTNRISFPPGLLKQAVKKRPEIKLIVTSATLDAVKFSSYFF 275
+DP L K+K E +R+ R G K ++KR +IK+I+ SAT D F+ +F
Sbjct: 132 NDPL-LKKYKFLILDEIHERSIRTDVLLGYTKILLQKRKKIKIILMSATFDINIFNQFFN 190
Query: 276 EAPIFTIPGRTFPVEVLYTKEPETDYLDASLITVMQIH 313
PI TIP + + + Y + DY+ + + T++QIH
Sbjct: 191 NPPIITIPHKLHKITIYYPRRNIEDYILSVVSTILQIH 228
Score = 84 (34.6 bits), Expect = 5.9e-14, Sum P(2) = 5.9e-14
Identities = 14/36 (38%), Positives = 24/36 (66%)
Query: 15 FPLEPNLSKMLIMSVHLQCSDEVLTIVSMLSVQNVF 50
FPL P + +L+ S+ C DE+ TIV++L+ ++F
Sbjct: 575 FPLNPIYANILLCSIEFNCIDEIATIVALLNCDSIF 610
Score = 57 (25.1 bits), Expect = 3.8e-17, Sum P(3) = 3.8e-17
Identities = 12/40 (30%), Positives = 25/40 (62%)
Query: 319 GDVLLFLTGKLDVRKQLLGIMDRHKLDVVSAGKNTVRVQK 358
GD+L+FL G+ ++ +++ IM + KL ++ G ++ K
Sbjct: 317 GDILVFLPGQEEI--EMVNIMLKEKLKIIYKGNLLNKLMK 354
>UNIPROTKB|O83538 [details] [associations]
symbol:TP_0526 "ATP-dependent helicase (HrpA)"
species:243276 "Treponema pallidum subsp. pallidum str. Nichols"
[GO:0005515 "protein binding" evidence=IPI] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026 EMBL:AE000520
GenomeReviews:AE000520_GR PIR:H71312 RefSeq:NP_218966.1
ProteinModelPortal:O83538 IntAct:O83538 GeneID:2610764
KEGG:tpa:TP0526 PATRIC:20531093 OMA:WEYRERF ProtClustDB:CLSK507866
Uniprot:O83538
Length = 668
Score = 181 (68.8 bits), Expect = 1.8e-10, P = 1.8e-10
Identities = 52/241 (21%), Positives = 115/241 (47%)
Query: 12 MAEFPLEPNLSKMLIMSV--HLQCSDEVLTIVSMLSVQNVFYRPXXXXXXXXXXXXXFNQ 69
M FPL P S+M++ ++ + D+VL + LS ++ F+
Sbjct: 426 MCLFPLGPRQSRMIVEALRRYPHSIDDVLIAAAFLSARSPLIFSEDQEEKTKKAHGTFSD 485
Query: 70 MEGDHITLLAVYNSWRNNKFSNAWCYENFVQIRTLKRAQDVRKQLLGIMDRHKLDVVSAG 129
GD ++ L +Y ++ +++C ++ R + ++++QL I+ +++ G
Sbjct: 486 PMGDFVSFLRIYRAYAQENNKHSFCQHFYLDERIMAEISNIKEQLELIVSGMGFPLLTGG 545
Query: 130 KNTVRVQKAVC--SGFFRNAAKKDPQEGYRTLVDSQVVYIHPSSALFNRQPEWVIYHELV 187
TV + +C +G + ++ ++ YR+L ++ ++IHP S ++ +P++++ E+V
Sbjct: 546 --TVE-EYLICVGTGMIQFVCVQEHRDSYRSLT-AECIHIHPGSCVYKDRPKFIVAGEIV 601
Query: 188 QTTKEYMREVTSIDPKWLVEFAPAFFKF--------SDPTKLSKFKKNQ-RLEPLQRTNR 238
+T++ Y V+ + K APA + + PT+ + KK+ R P +R R
Sbjct: 602 RTSRMYAMSVSPLSKKIAELIAPALLERRGRAEKHGTSPTRAAFLKKSTLRKGPRKRRVR 661
Query: 239 I 239
+
Sbjct: 662 V 662
Score = 147 (56.8 bits), Expect = 6.9e-17, Sum P(2) = 6.9e-17
Identities = 38/126 (30%), Positives = 66/126 (52%)
Query: 217 DPTKLSKFKKNQRLEPLQRTNRISFPPGLLKQAVKKRPEIKLIVTSATLDAVKFSSYFFE 276
DP LSK+ E +R+ I F GLLK+ +++R + +++++SAT++ FS YF E
Sbjct: 115 DPL-LSKYSIIMVDEAHERSLNIDFILGLLKRVLQQRHDFRIVISSATINTAMFSRYFNE 173
Query: 277 APIFTIPGRTFPVEVLY----------TKEPETDYLDASLITVMQIHLREPPGDVLLFLT 326
P+ I +PV V++ TKE E L+ + V ++ G +L+FL
Sbjct: 174 CPVIKIDAVAYPVTVIFDPPDTPASTHTKEAEAALLEKIVCIVERVIASRDKGAILIFLP 233
Query: 327 GKLDVR 332
G+ ++
Sbjct: 234 GERSIK 239
Score = 144 (55.7 bits), Expect = 6.9e-17, Sum P(2) = 6.9e-17
Identities = 29/51 (56%), Positives = 37/51 (72%)
Query: 491 ELIILPVYSALPSEMQTRIFEAAPPGSRKVVIATNIAETSLTIDGIFYVVD 541
+L +LP+Y L E Q ++F AP G RKVVIATNIAETS+TID + V+D
Sbjct: 253 KLFLLPLYGRLSKEEQEQVFNRAPFGKRKVVIATNIAETSITIDDVTTVID 303
Score = 104 (41.7 bits), Expect = 9.8e-13, Sum P(2) = 9.8e-13
Identities = 25/108 (23%), Positives = 60/108 (55%)
Query: 330 DVRKQLLGIMDRHKLDVVSAGKNTVRVQKAVC--SGFFRNAAKKDPQEGYRTLVDSQVVY 387
++++QL I+ +++ G TV + +C +G + ++ ++ YR+L ++ ++
Sbjct: 525 NIKEQLELIVSGMGFPLLTGG--TVE-EYLICVGTGMIQFVCVQEHRDSYRSLT-AECIH 580
Query: 388 IHPSSALFNRQPEWVIYHELVQTTKEYMREVTSIDPKWLVEFAPAFFK 435
IHP S ++ +P++++ E+V+T++ Y V+ + K APA +
Sbjct: 581 IHPGSCVYKDRPKFIVAGEIVRTSRMYAMSVSPLSKKIAELIAPALLE 628
>WB|WBGene00022433 [details] [associations]
symbol:Y108F1.5 species:6239 "Caenorhabditis elegans"
[GO:0004386 "helicase activity" evidence=IEA] InterPro:IPR000210
InterPro:IPR007502 InterPro:IPR013069 Pfam:PF00651 Pfam:PF04408
SMART:SM00225 SMART:SM00847 Gene3D:3.30.710.10 InterPro:IPR011333
SUPFAM:SSF54695 GO:GO:0004386 eggNOG:COG1643 EMBL:FO080095
GeneTree:ENSGT00390000016595 RefSeq:NP_872264.1 UniGene:Cel.28964
ProteinModelPortal:Q8MXK2 SMR:Q8MXK2 STRING:Q8MXK2
EnsemblMetazoa:Y108F1.5 GeneID:353490 KEGG:cel:CELE_Y108F1.5
UCSC:Y108F1.5 CTD:353490 WormBase:Y108F1.5 InParanoid:Q8MXK2
NextBio:953851 Uniprot:Q8MXK2
Length = 330
Score = 227 (85.0 bits), Expect = 1.0e-16, P = 1.0e-16
Identities = 50/134 (37%), Positives = 76/134 (56%)
Query: 3 SLVVTPIS-QMAEFPLEPNLSKMLIMSVHLQCSDEVLTIVSMLSVQNVFYRPXXXXXXXX 61
S + +P+ QMAEFPL P SK L+ S C E++TIV+M+ +Q+VF P
Sbjct: 18 SQLTSPLGLQMAEFPLPPMHSKCLLKSAEFGCFTEMVTIVAMMQIQDVFITPYRQRHQAD 77
Query: 62 XXXXXFNQMEGDHITLLAVYNSWRNNKFSNAWCYENFVQIRTLKRAQDVRKQLLGIMDRH 121
F EG+HIT+L V+ + N S WC ++FV R L RA +VR QL+ ++ R
Sbjct: 78 VIRKKFAVEEGNHITMLNVFTKFVENGRSKKWCSDHFVNYRGLMRADNVRSQLVRLLKRF 137
Query: 122 KLDVVSAGKNTVRV 135
+++ VS+ + +V
Sbjct: 138 EIEKVSSRGHYTKV 151
>FB|FBgn0030246 [details] [associations]
symbol:CG1582 species:7227 "Drosophila melanogaster"
[GO:0008026 "ATP-dependent helicase activity" evidence=ISS]
[GO:0004386 "helicase activity" evidence=ISS] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR000571 InterPro:IPR001650 InterPro:IPR006575
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF00642 Pfam:PF04408 Pfam:PF05773 PROSITE:PS50103
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
EMBL:AE014298 GO:GO:0008270 GO:GO:0006200 GO:GO:0003676
GO:GO:0004386 Gene3D:3.10.110.10 InterPro:IPR016135 SUPFAM:SSF54495
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
GeneTree:ENSGT00550000074257 KO:K13026 EMBL:AY119481
RefSeq:NP_572663.1 UniGene:Dm.11248 SMR:Q9VZ55
EnsemblMetazoa:FBtr0073403 GeneID:32021 KEGG:dme:Dmel_CG1582
UCSC:CG1582-RA FlyBase:FBgn0030246 InParanoid:Q9VZ55 OMA:IFQCLDS
OrthoDB:EOG4RJDGG ChiTaRS:CG1582 GenomeRNAi:32021 NextBio:776414
Uniprot:Q9VZ55
Length = 1288
Score = 153 (58.9 bits), Expect = 3.4e-16, Sum P(2) = 3.4e-16
Identities = 29/55 (52%), Positives = 41/55 (74%)
Query: 487 PDVPELIILPVYSALPSEMQTRIFEAAPPGSRKVVIATNIAETSLTIDGIFYVVD 541
P + I++P++SAL E Q +F+ APPG RK+V++TNIAETS+TID +VVD
Sbjct: 780 PRAGKFILVPLHSALSGEDQALVFKKAPPGKRKIVLSTNIAETSVTIDDCVFVVD 834
Score = 138 (53.6 bits), Expect = 3.4e-16, Sum P(2) = 3.4e-16
Identities = 27/63 (42%), Positives = 43/63 (68%)
Query: 234 QRTNRISFPPGLLKQAVKKRPEIKLIVTSATLDAVKFSSYFFEAPIFTIPGRTFPVEVLY 293
+R+ F +LK +++R ++K+I+ SATL+A FS YF AP+ IPGRTFPV+ L+
Sbjct: 588 ERSEESDFLLLILKNLLRERKDLKVILMSATLNAALFSDYFGGAPVLDIPGRTFPVQQLF 647
Query: 294 TKE 296
++
Sbjct: 648 LED 650
Score = 131 (51.2 bits), Expect = 1.8e-05, Sum P(2) = 1.8e-05
Identities = 33/120 (27%), Positives = 56/120 (46%)
Query: 6 VTPISQ-MAEFPLEPNLSKMLIMSVHLQCSDEVLTIVSMLSVQNVFYRPXXXXXXXXXXX 64
+TP+ +A P++ + K+++ QC D VLTI + LS ++ F P
Sbjct: 956 LTPLGHHLAALPVDVRIGKLMLYGAIFQCLDSVLTIAACLSNKSPFVSPLNKRTEADKCK 1015
Query: 65 XXFNQMEGDHITLLAVYNSW-----RNN-KFSNAWCYENFVQIRTLKRAQDVRKQLLGIM 118
F DH+T+L Y W R N S + E+F+ + TL+ D++ Q L ++
Sbjct: 1016 RMFALGNSDHLTVLNAYRKWLDVARRGNYAASRNYASEHFLSLNTLETIADLKYQYLELL 1075
Score = 57 (25.1 bits), Expect = 3.3e-06, Sum P(2) = 3.3e-06
Identities = 19/62 (30%), Positives = 34/62 (54%)
Query: 377 YRTLVDSQVVYIHPSSA---LFNRQPEWVIYHELVQTTKEYMREVTSIDPKWLVEFAPAF 433
++T D V IHPSS + Q ++++ E V+T+ Y+R+ + + +V FA +
Sbjct: 1155 FKTRGDGYVK-IHPSSVNSQVSVFQAPFLVFQEKVRTSAIYIRDCSMLPLIAMVLFAGSD 1213
Query: 434 FK 435
FK
Sbjct: 1214 FK 1215
Score = 57 (25.1 bits), Expect = 1.8e-05, Sum P(2) = 1.8e-05
Identities = 19/62 (30%), Positives = 34/62 (54%)
Query: 156 YRTLVDSQVVYIHPSSA---LFNRQPEWVIYHELVQTTKEYMREVTSIDPKWLVEFAPAF 212
++T D V IHPSS + Q ++++ E V+T+ Y+R+ + + +V FA +
Sbjct: 1155 FKTRGDGYVK-IHPSSVNSQVSVFQAPFLVFQEKVRTSAIYIRDCSMLPLIAMVLFAGSD 1213
Query: 213 FK 214
FK
Sbjct: 1214 FK 1215
Score = 41 (19.5 bits), Expect = 3.6e-06, Sum P(2) = 3.6e-06
Identities = 12/35 (34%), Positives = 15/35 (42%)
Query: 283 PGRTFPVEVLYTKEPETDYLDASLITVMQIHLREP 317
PG+ E L E Y + S T I+L EP
Sbjct: 693 PGKKIKDEKLTLAETYQRYAEYSKPTCKSIYLMEP 727
>UNIPROTKB|E1C9C2 [details] [associations]
symbol:DHX37 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR003593 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS51194
SMART:SM00382 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
GeneTree:ENSGT00550000074985 OMA:AKLQPRT EMBL:AADN02034854
IPI:IPI00601367 Ensembl:ENSGALT00000004688 Uniprot:E1C9C2
Length = 1145
Score = 162 (62.1 bits), Expect = 7.7e-16, Sum P(2) = 7.7e-16
Identities = 27/66 (40%), Positives = 44/66 (66%)
Query: 374 QEGYRTLVDSQVVYIHPSSALFNRQPEWVIYHELVQTTKEYMREVTSIDPKWLVEFAPAF 433
+ Y+T + V+IHPSS LF + PE+V+Y E+V+TTK YM+ V++++P+W+ P +
Sbjct: 941 KNAYKTALLDDPVFIHPSSVLFKQLPEFVVYQEIVETTKLYMKGVSAVEPEWIPALLPPY 1000
Query: 434 FKFSDP 439
F P
Sbjct: 1001 CHFGKP 1006
Score = 162 (62.1 bits), Expect = 4.6e-11, Sum P(3) = 4.6e-11
Identities = 27/66 (40%), Positives = 44/66 (66%)
Query: 153 QEGYRTLVDSQVVYIHPSSALFNRQPEWVIYHELVQTTKEYMREVTSIDPKWLVEFAPAF 212
+ Y+T + V+IHPSS LF + PE+V+Y E+V+TTK YM+ V++++P+W+ P +
Sbjct: 941 KNAYKTALLDDPVFIHPSSVLFKQLPEFVVYQEIVETTKLYMKGVSAVEPEWIPALLPPY 1000
Query: 213 FKFSDP 218
F P
Sbjct: 1001 CHFGKP 1006
Score = 154 (59.3 bits), Expect = 5.7e-15, Sum P(2) = 5.7e-15
Identities = 30/50 (60%), Positives = 37/50 (74%)
Query: 492 LIILPVYSALPSEMQTRIFEAAPPGSRKVVIATNIAETSLTIDGIFYVVD 541
L +LP+YS L E Q ++F PPG+R V+ATN+AETSLTI GI YVVD
Sbjct: 577 LYVLPLYSLLAPEKQAKVFRPPPPGTRLCVVATNVAETSLTIPGIKYVVD 626
Score = 124 (48.7 bits), Expect = 7.7e-16, Sum P(2) = 7.7e-16
Identities = 42/120 (35%), Positives = 59/120 (49%)
Query: 221 LSKFKKNQRLEPLQRTNRISFPPGLLKQAV----KKRPEIKLIVTSATLDAVKFS--SYF 274
LSK+K E +R+ GLL + V KK +KLI+ SATL F+ +
Sbjct: 353 LSKYKVIIIDEAHERSMYTDILIGLLSRIVPLREKKGLPLKLIIMSATLRVEDFTENTRL 412
Query: 275 FEA--PIFTIPGRTFPVEVLYTKE-PETDYLDASLITVMQIHLREPPGDVLLFLTGKLDV 331
F P+ + R FPV V + K+ P DY V +IH P G +L+FLTG+ +V
Sbjct: 413 FAGTPPVLQVDARQFPVTVHFNKKTPLDDYSGECFRKVCKIHRMLPSGGILVFLTGQAEV 472
Score = 84 (34.6 bits), Expect = 4.6e-11, Sum P(3) = 4.6e-11
Identities = 18/49 (36%), Positives = 30/49 (61%)
Query: 3 SLVVTPISQ-MAEFPLEPNLSKMLIMSVHLQCSDEVLTIVSMLSVQNVF 50
S ++P+ + MA FP+ P +KML +S C +TIVS ++V+ +F
Sbjct: 754 SCPISPLGRVMATFPVAPRYAKMLALSRQHDCLPYTITIVSAMTVRELF 802
Score = 38 (18.4 bits), Expect = 4.6e-11, Sum P(3) = 4.6e-11
Identities = 10/46 (21%), Positives = 22/46 (47%)
Query: 69 QMEGDHITLLAVYNSWRNNKFSNAWCYENFVQIRTLKRAQDVRKQL 114
Q GD + +L + + + +C EN ++ + + + +R QL
Sbjct: 839 QKLGDLMVMLGAVGACEYSGCTPKFCEENGLRYKAMLEIRRLRGQL 884
>SGD|S000004735 [details] [associations]
symbol:ECM16 "Essential DEAH-box ATP-dependent RNA helicase
specific to U3 snoRNP" species:4932 "Saccharomyces cerevisiae"
[GO:0005730 "nucleolus" evidence=IEA;IDA] [GO:0000462 "maturation
of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA,
LSU-rRNA)" evidence=IMP] [GO:0042254 "ribosome biogenesis"
evidence=IEA;IDA;TAS] [GO:0030529 "ribonucleoprotein complex"
evidence=IEA] [GO:0006364 "rRNA processing" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0003723 "RNA binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0016787 "hydrolase activity"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0005739 "mitochondrion" evidence=IDA] [GO:0032040
"small-subunit processome" evidence=IDA] [GO:0030686 "90S
preribosome" evidence=IDA] [GO:0003724 "RNA helicase activity"
evidence=IDA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 SGD:S000004735 GO:GO:0005739 GO:GO:0005524
GO:GO:0005730 GO:GO:0003723 EMBL:BK006946 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0030686 eggNOG:COG1643
InterPro:IPR011709 Pfam:PF07717 GO:GO:0032040 GO:GO:0008026
GO:GO:0003724 GO:GO:0000462 EMBL:Z48622 PIR:S53058
RefSeq:NP_013847.1 ProteinModelPortal:Q04217 SMR:Q04217
DIP:DIP-6722N IntAct:Q04217 MINT:MINT-614026 STRING:Q04217
PaxDb:Q04217 PeptideAtlas:Q04217 PRIDE:Q04217 EnsemblFungi:YMR128W
GeneID:855158 KEGG:sce:YMR128W CYGD:YMR128w
GeneTree:ENSGT00550000074985 HOGENOM:HOG000201240 KO:K14780
OMA:HQLKREE OrthoDB:EOG4KM2B8 NextBio:978575 Genevestigator:Q04217
GermOnline:YMR128W Uniprot:Q04217
Length = 1267
Score = 162 (62.1 bits), Expect = 7.8e-16, Sum P(2) = 7.8e-16
Identities = 36/86 (41%), Positives = 54/86 (62%)
Query: 457 KYEEPNAWRISREEIDTACEILYERMKSLGPDVPE-LIILPVYSALPSEMQTRIFEAAPP 515
+YEE + E+ + E +E + + G + L +LP+YS LP++ Q R+F+ P
Sbjct: 693 RYEEDEGNSGNGEDEEDEEEEGFEEVLTEGQTANDPLYVLPLYSLLPTKEQMRVFQKPPQ 752
Query: 516 GSRKVVIATNIAETSLTIDGIFYVVD 541
GSR ++ATN+AETSLTI G+ YVVD
Sbjct: 753 GSRLCIVATNVAETSLTIPGVRYVVD 778
Score = 125 (49.1 bits), Expect = 7.8e-16, Sum P(2) = 7.8e-16
Identities = 28/91 (30%), Positives = 48/91 (52%)
Query: 245 LLKQAVKKRPEIKLIVTSATLDAVKFSS----YFFEAPIFTIPGRTFPVEVLYTKEPETD 300
L K+ + ++KLI+ SATL FS + P+ + R FPV + + + +
Sbjct: 542 LHKENPIEHKKLKLIIMSATLRVSDFSENKTLFPIAPPVLQVDARQFPVSIHFNRRTAFN 601
Query: 301 YLDASLITVMQIHLREPPGDVLLFLTGKLDV 331
Y D + +IH + PPG +L+FLTG+ ++
Sbjct: 602 YTDEAFRKTCKIHQKLPPGAILVFLTGQQEI 632
Score = 53 (23.7 bits), Expect = 0.00019, Sum P(2) = 0.00019
Identities = 11/30 (36%), Positives = 19/30 (63%)
Query: 381 VDSQVVYIHPSSALFN---RQPEWVIYHEL 407
++ VYIHP+S L N P++++Y+ L
Sbjct: 1128 IEDCFVYIHPTSILNNLGEMPPKYMLYYSL 1157
Score = 44 (20.5 bits), Expect = 1.8e-07, Sum P(2) = 1.8e-07
Identities = 10/22 (45%), Positives = 14/22 (63%)
Query: 14 EFPLEPNLSKMLIMSVHLQCSD 35
E P+E K++IMS L+ SD
Sbjct: 545 ENPIEHKKLKLIIMSATLRVSD 566
>UNIPROTKB|E7EWK3 [details] [associations]
symbol:DHX36 "Probable ATP-dependent RNA helicase DHX36"
species:9606 "Homo sapiens" [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0003725 "double-stranded RNA binding" evidence=IEA] [GO:0009615
"response to virus" evidence=IEA] [GO:0043330 "response to
exogenous dsRNA" evidence=IEA] [GO:0005634 "nucleus" evidence=IDA]
[GO:0005737 "cytoplasm" evidence=IDA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0005634 GO:GO:0005737 GO:GO:0009615 GO:GO:0003725
EMBL:AC018452 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026 GO:GO:0043330
EMBL:AC134026 HGNC:HGNC:14410 IPI:IPI00945848
ProteinModelPortal:E7EWK3 SMR:E7EWK3 Ensembl:ENST00000481941
ArrayExpress:E7EWK3 Bgee:E7EWK3 Uniprot:E7EWK3
Length = 797
Score = 162 (62.1 bits), Expect = 8.7e-16, Sum P(4) = 8.7e-16
Identities = 28/51 (54%), Positives = 42/51 (82%)
Query: 491 ELIILPVYSALPSEMQTRIFEAAPPGSRKVVIATNIAETSLTIDGIFYVVD 541
+ +I+P++S +P+ QT++F+ PPG RK+VIATNIAETS+TID + YV+D
Sbjct: 432 KFLIIPLHSLMPTVNQTQVFKRTPPGVRKIVIATNIAETSITIDDVVYVID 482
Score = 144 (55.7 bits), Expect = 2.6e-06, P = 2.6e-06
Identities = 42/160 (26%), Positives = 73/160 (45%)
Query: 6 VTPIS-QMAEFPLEPNLSKMLIMSVHLQCSDEVLTIVSMLSVQNVFYRPXXXXXXXXXXX 64
+TP+ +A P+EP++ KM++ C D VLTI + LS ++ F P
Sbjct: 600 LTPLGVHLARLPVEPHIGKMILFGALFCCLDPVLTIAASLSFKDPFVIPLGKEKIADARR 659
Query: 65 XXF-NQMEGDHITLLAVYNSW-----RNNKFSNAWCYENFVQIRTLKRAQDVRKQ----L 114
DH+T++ + W R ++ +C+E F+ TL+ +++ Q L
Sbjct: 660 KELAKDTRSDHLTVVNAFEGWEEARRRGFRYEKDYCWEYFLSSNTLQMLHNMKGQFAEHL 719
Query: 115 LG---IMDRHKLDVVS-AGKNTVRVQKAV-CSGFFRNAAK 149
LG + R+ D S + ++ KAV C+G + AK
Sbjct: 720 LGAGFVSSRNPKDPESNINSDNEKIIKAVICAGLYPKVAK 759
Score = 110 (43.8 bits), Expect = 8.7e-16, Sum P(4) = 8.7e-16
Identities = 25/52 (48%), Positives = 34/52 (65%)
Query: 245 LLKQAVKKRPEIKLIVTSATLDAVKFSSYFFEAPIFTIPGRTFPVEVLYTKE 296
++K + R ++K+I+ SATL+A KFS YF P+ IPG TFPV V Y E
Sbjct: 263 VVKDLLNFRSDLKVILMSATLNAEKFSEYFGNCPMIHIPGFTFPV-VEYLLE 313
Score = 48 (22.0 bits), Expect = 8.7e-16, Sum P(4) = 8.7e-16
Identities = 13/32 (40%), Positives = 18/32 (56%)
Query: 298 ETDYLDASLITVM--QIHLREPPGDVLLFLTG 327
E D +D +LI + I L E G +L+FL G
Sbjct: 380 EDDKVDLNLIVALIRYIVLEEEDGAILVFLPG 411
Score = 44 (20.5 bits), Expect = 8.7e-16, Sum P(4) = 8.7e-16
Identities = 9/27 (33%), Positives = 18/27 (66%)
Query: 110 VRKQLLGIMDRHKLDVVSA----GKNT 132
++K+L+ ++D H++ V+S GK T
Sbjct: 126 MQKELVNLIDNHQVTVISGETGCGKTT 152
Score = 44 (20.5 bits), Expect = 5.8e-08, Sum P(2) = 5.8e-08
Identities = 9/27 (33%), Positives = 18/27 (66%)
Query: 331 VRKQLLGIMDRHKLDVVSA----GKNT 353
++K+L+ ++D H++ V+S GK T
Sbjct: 126 MQKELVNLIDNHQVTVISGETGCGKTT 152
>TAIR|locus:2142459 [details] [associations]
symbol:AT5G10370 species:3702 "Arabidopsis thaliana"
[GO:0003676 "nucleic acid binding" evidence=IEA;ISS] [GO:0004386
"helicase activity" evidence=IEA;ISS] [GO:0005524 "ATP binding"
evidence=IEA;ISS] [GO:0005622 "intracellular" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISM] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] InterPro:IPR001841 InterPro:IPR018957
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR002867
InterPro:IPR004087 InterPro:IPR007087 InterPro:IPR007502
InterPro:IPR011545 InterPro:IPR015880 Pfam:PF00270 Pfam:PF00271
Pfam:PF01485 Pfam:PF04408 PROSITE:PS00028 PROSITE:PS00690
PROSITE:PS50089 PROSITE:PS51194 SMART:SM00184 SMART:SM00322
SMART:SM00355 SMART:SM00490 SMART:SM00647 SMART:SM00847
Pfam:PF00097 Prosite:PS00518 GO:GO:0005524 EMBL:CP002688
GO:GO:0046872 GO:GO:0008270 GO:GO:0003723 GO:GO:0005622
Gene3D:3.30.40.10 InterPro:IPR013083 InterPro:IPR017907
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 KO:K12818 IPI:IPI00548793
RefSeq:NP_196599.2 UniGene:At.49004 PRIDE:F4KGU4
EnsemblPlants:AT5G10370.1 GeneID:830901 KEGG:ath:AT5G10370
OMA:HQEPEIR ArrayExpress:F4KGU4 Uniprot:F4KGU4
Length = 1775
Score = 181 (68.8 bits), Expect = 6.7e-10, P = 6.7e-10
Identities = 53/209 (25%), Positives = 96/209 (45%)
Query: 12 MAEFPLEPNLSKMLIMSVHLQCSDEVLTIVS-MLSVQNVFYRPXXXXXXXXXXXXX--FN 68
+ + LEP L K+++ + E + + + M + ++F R F
Sbjct: 723 LVKLGLEPKLGKLILGCFRHRMGKEGIVLAAVMANASSIFCRVGNFDDKMKADRLKVQFC 782
Query: 69 QMEGDHITLLAVYNSWRN--NKFSNAWCYENFVQIRTLKRAQDVRKQLLGIMDRHKLDVV 126
GD TLL+VY W + + N WC+EN + ++++R +D K+L ++R +L +V
Sbjct: 783 NQNGDLFTLLSVYKEWASLPRERRNKWCWENSLNAKSMRRCEDTVKELEICIER-ELTLV 841
Query: 127 SAG----------KNTVRVQKAVCSGFFRNAAKKDP--QEGYRTLVDSQVVYIHPSSAL- 173
S K+ ++ + + N A Q GY + Q V +HPS +L
Sbjct: 842 SPSYWVWNPNEGTKHDKHLKMVILASLAENVAMYTGYNQLGYEVALTGQQVQLHPSCSLL 901
Query: 174 -FNRQPEWVIYHELVQTTKEYMREVTSID 201
F ++P WV++ EL+ +Y+ VT+ D
Sbjct: 902 AFGQKPSWVVFGELLSIVDQYLVCVTACD 930
Score = 147 (56.8 bits), Expect = 9.5e-16, Sum P(2) = 9.5e-16
Identities = 34/96 (35%), Positives = 54/96 (56%)
Query: 245 LLKQAVKKRPEIKLIVTSATLDAVKFSSYFFEAPIFTIPGRTFPVEVLY----TKEPET- 299
LLK+ + +R +++L++ SAT DA + S YFF I + GR FPVE++Y T+E
Sbjct: 442 LLKKLLSRRIDLRLVIMSATADAKQLSQYFFSCGILLVNGRNFPVEIVYSPSDTEENSVV 501
Query: 300 ----DYLDASLITVMQIHLREPPGDVLLFLTGKLDV 331
Y+ + ++IH E G +L FLT + +V
Sbjct: 502 GGIASYVGDVVKMAVEIHKTEKEGTILAFLTSQAEV 537
Score = 143 (55.4 bits), Expect = 9.5e-16, Sum P(2) = 9.5e-16
Identities = 38/90 (42%), Positives = 52/90 (57%)
Query: 463 AWRISREEIDTACEILYERMKSLGPDVPELIILPVYSALPSEMQTRIFEAAPPGSRKVVI 522
A+ S+ E++ ACE P I LP++ L E Q R+F+ P G RKV+
Sbjct: 529 AFLTSQAEVEWACERFI---------TPSAIALPLHGKLSFEEQFRVFQNHP-GRRKVIF 578
Query: 523 ATNIAETSLTIDGIFYVVDPFDIEVRQAKY 552
ATNIAETSLTI G+ YV+D V+++KY
Sbjct: 579 ATNIAETSLTIPGVKYVIDSG--MVKESKY 606
Score = 95 (38.5 bits), Expect = 9.0e-11, Sum P(2) = 9.0e-11
Identities = 19/51 (37%), Positives = 30/51 (58%)
Query: 374 QEGYRTLVDSQVVYIHPSSAL--FNRQPEWVIYHELVQTTKEYMREVTSID 422
Q GY + Q V +HPS +L F ++P WV++ EL+ +Y+ VT+ D
Sbjct: 880 QLGYEVALTGQQVQLHPSCSLLAFGQKPSWVVFGELLSIVDQYLVCVTACD 930
>UNIPROTKB|F6V8H1 [details] [associations]
symbol:DHX36 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
GeneTree:ENSGT00550000074257 OMA:RIRNRSY Ensembl:ENSCAFT00000013769
EMBL:AAEX03013695 Uniprot:F6V8H1
Length = 1122
Score = 161 (61.7 bits), Expect = 1.2e-15, Sum P(4) = 1.2e-15
Identities = 28/49 (57%), Positives = 41/49 (83%)
Query: 493 IILPVYSALPSEMQTRIFEAAPPGSRKVVIATNIAETSLTIDGIFYVVD 541
+I+P++S +P+ QT++F+ PPG RK+VIATNIAETS+TID + YV+D
Sbjct: 634 LIIPLHSLMPTVNQTQVFKKTPPGVRKIVIATNIAETSITIDDVVYVID 682
Score = 145 (56.1 bits), Expect = 3.1e-06, P = 3.1e-06
Identities = 42/160 (26%), Positives = 74/160 (46%)
Query: 6 VTPIS-QMAEFPLEPNLSKMLIMSVHLQCSDEVLTIVSMLSVQNVFYRPXXXXXXXXXXX 64
+TP+ +A P+EP++ KM++ C D VLTI + LS ++ F P
Sbjct: 800 LTPLGVHLARLPVEPHIGKMILFGALFCCLDPVLTIAASLSFKDPFVIPLGKEKIADARR 859
Query: 65 XXF-NQMEGDHITLLAVYNSW-----RNNKFSNAWCYENFVQIRTLKRAQDVRKQ----L 114
+ DH+T++ + W R ++ +C+E F+ TL+ +++ Q L
Sbjct: 860 KELAKDTKSDHLTVVNAFEGWEEARRRGFRYEKDYCWEYFLSSNTLQMLHNMKGQFAEHL 919
Query: 115 LG---IMDRHKLDVVS-AGKNTVRVQKAV-CSGFFRNAAK 149
LG + R+ D S + ++ KAV C+G + AK
Sbjct: 920 LGAGFVSSRNPKDPKSNINSDNEKIIKAVICAGLYPKVAK 959
Score = 119 (46.9 bits), Expect = 1.2e-15, Sum P(4) = 1.2e-15
Identities = 26/52 (50%), Positives = 35/52 (67%)
Query: 245 LLKQAVKKRPEIKLIVTSATLDAVKFSSYFFEAPIFTIPGRTFPVEVLYTKE 296
++K + RP++K+I+ SATL+A KFS YF P+ IPG TFPV V Y E
Sbjct: 463 VIKDLLNFRPDLKVILMSATLNAEKFSEYFGNCPMIHIPGFTFPV-VEYLLE 513
Score = 75 (31.5 bits), Expect = 8.9e-07, Sum P(4) = 8.9e-07
Identities = 31/112 (27%), Positives = 49/112 (43%)
Query: 333 KQLLG---IMDRHKLDVVS-AGKNTVRVQKAV-CSGFFR-------NAAKKDPQEGYRTL 380
+ LLG + R+ D S + ++ KAV C+G + N KK T
Sbjct: 917 EHLLGAGFVSSRNPKDPKSNINSDNEKIIKAVICAGLYPKVAKIRLNLGKKRKMVKVYTK 976
Query: 381 VDSQVVYIHPSSALFNRQP---EWVIYHELVQTTKEYMREVTSIDPKWLVEF 429
D +V IHP S + W+IYH ++T+ Y+ + T + P L+ F
Sbjct: 977 TDG-LVAIHPKSVNVEQTEFHYNWLIYHLKMRTSSIYLYDCTEVSPYCLLFF 1027
Score = 47 (21.6 bits), Expect = 1.2e-15, Sum P(4) = 1.2e-15
Identities = 12/32 (37%), Positives = 18/32 (56%)
Query: 298 ETDYLDASLITVMQIH--LREPPGDVLLFLTG 327
+ D +D +LI + H L E G +L+FL G
Sbjct: 580 DDDKVDLNLIAALIRHIVLEEEDGAILVFLPG 611
Score = 43 (20.2 bits), Expect = 1.2e-15, Sum P(4) = 1.2e-15
Identities = 9/27 (33%), Positives = 18/27 (66%)
Query: 110 VRKQLLGIMDRHKLDVVSA----GKNT 132
++K+L+ ++D H++ V+S GK T
Sbjct: 326 MQKELVNMIDNHQVTVISGETGCGKTT 352
Score = 43 (20.2 bits), Expect = 2.2e-07, Sum P(2) = 2.2e-07
Identities = 9/27 (33%), Positives = 18/27 (66%)
Query: 331 VRKQLLGIMDRHKLDVVSA----GKNT 353
++K+L+ ++D H++ V+S GK T
Sbjct: 326 MQKELVNMIDNHQVTVISGETGCGKTT 352
>UNIPROTKB|Q05B79 [details] [associations]
symbol:DHX36 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0043330 "response to exogenous dsRNA" evidence=IEA]
[GO:0009615 "response to virus" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0003725 "double-stranded RNA binding" evidence=IEA] [GO:0005524
"ATP binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 GO:GO:0005524 GO:GO:0005634 GO:GO:0005737
GO:GO:0009615 GO:GO:0003725 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 GO:GO:0043330 HOGENOM:HOG000247063
GeneTree:ENSGT00550000074257 CTD:170506 HOVERGEN:HBG081438
KO:K14442 OMA:RIRNRSY OrthoDB:EOG4K6G3J EMBL:DAAA02002574
EMBL:DAAA02002573 EMBL:BC122652 IPI:IPI00686397
RefSeq:NP_001073720.1 UniGene:Bt.103344 Ensembl:ENSBTAT00000008082
GeneID:509583 KEGG:bta:509583 InParanoid:Q05B79 NextBio:20869030
Uniprot:Q05B79
Length = 1010
Score = 164 (62.8 bits), Expect = 1.7e-15, Sum P(4) = 1.7e-15
Identities = 29/51 (56%), Positives = 42/51 (82%)
Query: 491 ELIILPVYSALPSEMQTRIFEAAPPGSRKVVIATNIAETSLTIDGIFYVVD 541
+ II+P++S +P+ QT++F+ PPG RK+VIATNIAETS+TID + YV+D
Sbjct: 520 KFIIIPLHSLMPTVNQTQVFKRTPPGVRKIVIATNIAETSITIDDVVYVID 570
Score = 145 (56.1 bits), Expect = 2.7e-06, P = 2.7e-06
Identities = 42/160 (26%), Positives = 74/160 (46%)
Query: 6 VTPIS-QMAEFPLEPNLSKMLIMSVHLQCSDEVLTIVSMLSVQNVFYRPXXXXXXXXXXX 64
+TP+ +A P+EP++ KM++ C D VLTI + LS ++ F P
Sbjct: 688 LTPLGVHLARLPVEPHIGKMILFGALFCCLDPVLTIAASLSFKDPFVIPLGKEKVADARR 747
Query: 65 XXF-NQMEGDHITLLAVYNSW-----RNNKFSNAWCYENFVQIRTLKRAQDVRKQ----L 114
+ DH+T++ + W R ++ +C+E F+ TL+ +++ Q L
Sbjct: 748 KELAKDTKSDHLTVVNAFKGWEKAKQRGFRYEKDYCWEYFLSSNTLQMLHNMKGQFAEHL 807
Query: 115 LG---IMDRHKLDVVS-AGKNTVRVQKAV-CSGFFRNAAK 149
LG + R+ D S + ++ KAV C+G + AK
Sbjct: 808 LGAGFVSSRNPQDPESNINSDNEKIIKAVICAGLYPKVAK 847
Score = 118 (46.6 bits), Expect = 1.7e-15, Sum P(4) = 1.7e-15
Identities = 25/52 (48%), Positives = 35/52 (67%)
Query: 245 LLKQAVKKRPEIKLIVTSATLDAVKFSSYFFEAPIFTIPGRTFPVEVLYTKE 296
++K + RP++K+++ SATL+A KFS YF P+ IPG TFPV V Y E
Sbjct: 351 VVKDLLSYRPDLKVVLMSATLNAEKFSEYFGNCPMIHIPGFTFPV-VEYLLE 401
Score = 78 (32.5 bits), Expect = 1.4e-06, Sum P(4) = 1.4e-06
Identities = 32/112 (28%), Positives = 49/112 (43%)
Query: 333 KQLLG---IMDRHKLDVVS-AGKNTVRVQKAV-CSGFFR-------NAAKKDPQEGYRTL 380
+ LLG + R+ D S + ++ KAV C+G + N KK T
Sbjct: 805 EHLLGAGFVSSRNPQDPESNINSDNEKIIKAVICAGLYPKVAKIRLNLGKKRKMVKVYTK 864
Query: 381 VDSQVVYIHPSSALFNRQP---EWVIYHELVQTTKEYMREVTSIDPKWLVEF 429
D VV IHP S + W+IYH ++T+ Y+ + T + P L+ F
Sbjct: 865 TDG-VVAIHPKSVNVEQTEFNYNWLIYHLKMRTSSIYLYDCTEVSPYCLLFF 915
Score = 43 (20.2 bits), Expect = 1.7e-15, Sum P(4) = 1.7e-15
Identities = 9/27 (33%), Positives = 18/27 (66%)
Query: 110 VRKQLLGIMDRHKLDVVSA----GKNT 132
++K+L+ ++D H++ V+S GK T
Sbjct: 214 MQKELVNMIDNHQVTVISGETGCGKTT 240
Score = 43 (20.2 bits), Expect = 8.2e-08, Sum P(2) = 8.2e-08
Identities = 9/27 (33%), Positives = 18/27 (66%)
Query: 331 VRKQLLGIMDRHKLDVVSA----GKNT 353
++K+L+ ++D H++ V+S GK T
Sbjct: 214 MQKELVNMIDNHQVTVISGETGCGKTT 240
Score = 41 (19.5 bits), Expect = 1.7e-15, Sum P(4) = 1.7e-15
Identities = 11/32 (34%), Positives = 18/32 (56%)
Query: 298 ETDYLDASLITVM--QIHLREPPGDVLLFLTG 327
+ + +D +LI + I L E G +L+FL G
Sbjct: 468 DDEKVDLNLIAALIRYIVLEEEDGAILVFLPG 499
>TAIR|locus:2008144 [details] [associations]
symbol:AT1G48650 species:3702 "Arabidopsis thaliana"
[GO:0003676 "nucleic acid binding" evidence=IEA;ISS] [GO:0003723
"RNA binding" evidence=IEA] [GO:0003725 "double-stranded RNA
binding" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA;ISS] [GO:0005524 "ATP binding" evidence=IEA;ISS]
[GO:0005622 "intracellular" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] InterPro:IPR001159
InterPro:IPR001650 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00035 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS51194
SMART:SM00358 SMART:SM00490 SMART:SM00847 InterPro:IPR014720
EMBL:CP002684 GO:GO:0005524 Gene3D:3.30.160.20 GO:GO:0005622
GO:GO:0003725 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026 KO:K14442
IPI:IPI00938568 RefSeq:NP_001154411.1 UniGene:At.22775
ProteinModelPortal:F4HYJ6 SMR:F4HYJ6 PRIDE:F4HYJ6
EnsemblPlants:AT1G48650.2 GeneID:841287 KEGG:ath:AT1G48650
OMA:GRIAYND Uniprot:F4HYJ6
Length = 1206
Score = 229 (85.7 bits), Expect = 2.5e-15, P = 2.5e-15
Identities = 58/219 (26%), Positives = 113/219 (51%)
Query: 6 VTPISQ-MAEFPLEPNLSKMLIMSVHLQCSDEVLTIVSMLSVQNVFYRPXXXXXXXXXXX 64
+TP+ + ++ P+EP L KMLI+ C D V+T+V+ LSV++ F P
Sbjct: 777 LTPLGKNLSMLPVEPKLGKMLILGAIFNCLDPVMTVVAGLSVRDPFLMPFDKKDLAETAR 836
Query: 65 XXFNQME-GDHITLLAVYNSWRNNKFSNA---WCYENFVQIRTLKRAQDVRKQLLGIMDR 120
F+ + DH+TL+ YN W++ + +++ +C++NF+ +TLK +RKQ ++
Sbjct: 837 SKFSGRDYSDHLTLVRAYNGWKDAERTHSGYDYCWKNFLSSQTLKAMDSMRKQFFNLLKE 896
Query: 121 HKL--DVVSAGK---NTVRVQKAVCSGFFR---NAAKKDPQEGYRTLVDSQVVYIHPSSA 172
L ++ K + V+ +C+G F + K+ +T+ D QV+ ++ SS
Sbjct: 897 ASLIDNIEGCSKLSHDEHLVRAIICAGMFPGVCSVVNKEKSITLKTMEDGQVL-LYSSSV 955
Query: 173 LFNRQ--P-EWVIYHELVQTTKEYMREVTSIDPKWLVEF 208
N P W+++++ V+ ++R+ T++ L+ F
Sbjct: 956 NGNVPMIPFPWLVFNDKVKVNSVFLRDSTAVSDSVLLLF 994
Score = 130 (50.8 bits), Expect = 1.6e-12, Sum P(2) = 1.6e-12
Identities = 33/71 (46%), Positives = 44/71 (61%)
Query: 245 LLKQAVKKRPEIKLIVTSATLDAVKFSSYFFEAPIFTIPGRTFPVEVLYTKEPETDYLDA 304
+LK + +RP++KLI+ SATL+A FSSYF AP IPG T+PV + + DYL+
Sbjct: 438 VLKDLLPRRPDLKLILMSATLNAELFSSYFGGAPAMHIPGFTYPVRAHFLE----DYLET 493
Query: 305 S---LITVMQI 312
S L T QI
Sbjct: 494 SGYRLTTYNQI 504
Score = 126 (49.4 bits), Expect = 1.6e-12, Sum P(2) = 1.6e-12
Identities = 25/58 (43%), Positives = 40/58 (68%)
Query: 484 SLGPDVPELIILPVYSALPSEMQTRIFEAAPPGSRKVVIATNIAETSLTIDGIFYVVD 541
SL D ++++L + ++ S Q IF+ P G RK+V+ATN+AETS+TI+ + YV+D
Sbjct: 602 SLLGDPNKVLLLACHGSMASSEQRLIFDRPPEGIRKIVLATNMAETSITINDVVYVID 659
Score = 66 (28.3 bits), Expect = 2.4e-06, Sum P(2) = 2.4e-06
Identities = 19/80 (23%), Positives = 41/80 (51%)
Query: 356 VQKAVCSGFFR---NAAKKDPQEGYRTLVDSQVVYIHPSSALFNRQ--P-EWVIYHELVQ 409
V+ +C+G F + K+ +T+ D QV+ ++ SS N P W+++++ V+
Sbjct: 916 VRAIICAGMFPGVCSVVNKEKSITLKTMEDGQVL-LYSSSVNGNVPMIPFPWLVFNDKVK 974
Query: 410 TTKEYMREVTSIDPKWLVEF 429
++R+ T++ L+ F
Sbjct: 975 VNSVFLRDSTAVSDSVLLLF 994
>UNIPROTKB|Q9H2U1 [details] [associations]
symbol:DHX36 "Probable ATP-dependent RNA helicase DHX36"
species:9606 "Homo sapiens" [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0003725 "double-stranded RNA binding" evidence=IEA] [GO:0009615
"response to virus" evidence=IEA] [GO:0043330 "response to
exogenous dsRNA" evidence=IEA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0005634 "nucleus" evidence=IDA] [GO:0005737
"cytoplasm" evidence=IDA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 GO:GO:0005524 GO:GO:0005634 GO:GO:0005737
EMBL:CH471052 GO:GO:0009615 GO:GO:0003725 EMBL:AC018452
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026 GO:GO:0043330
HOGENOM:HOG000247063 EMBL:AF217190 EMBL:AJ577133 EMBL:AJ577134
EMBL:AK314435 EMBL:AC134026 EMBL:BC036035 EMBL:AB040921
IPI:IPI00027415 IPI:IPI00217760 IPI:IPI00784170 PIR:D56236
RefSeq:NP_001107869.1 RefSeq:NP_065916.2 UniGene:Hs.446270
ProteinModelPortal:Q9H2U1 SMR:Q9H2U1 IntAct:Q9H2U1
MINT:MINT-3066797 STRING:Q9H2U1 PhosphoSite:Q9H2U1 DMDM:74762733
PaxDb:Q9H2U1 PRIDE:Q9H2U1 DNASU:170506 Ensembl:ENST00000308361
Ensembl:ENST00000329463 Ensembl:ENST00000496811 GeneID:170506
KEGG:hsa:170506 UCSC:uc003ezy.4 UCSC:uc003ezz.4 UCSC:uc010hvq.3
CTD:170506 GeneCards:GC03M153990 HGNC:HGNC:14410 HPA:HPA035399
MIM:612767 neXtProt:NX_Q9H2U1 PharmGKB:PA27223 HOVERGEN:HBG081438
InParanoid:Q9H2U1 KO:K14442 OMA:RIRNRSY OrthoDB:EOG4K6G3J
PhylomeDB:Q9H2U1 GenomeRNAi:170506 NextBio:88959
ArrayExpress:Q9H2U1 Bgee:Q9H2U1 CleanEx:HS_DHX36
Genevestigator:Q9H2U1 GermOnline:ENSG00000174953 Uniprot:Q9H2U1
Length = 1008
Score = 162 (62.1 bits), Expect = 2.8e-15, Sum P(4) = 2.8e-15
Identities = 28/51 (54%), Positives = 42/51 (82%)
Query: 491 ELIILPVYSALPSEMQTRIFEAAPPGSRKVVIATNIAETSLTIDGIFYVVD 541
+ +I+P++S +P+ QT++F+ PPG RK+VIATNIAETS+TID + YV+D
Sbjct: 518 KFLIIPLHSLMPTVNQTQVFKRTPPGVRKIVIATNIAETSITIDDVVYVID 568
Score = 144 (55.7 bits), Expect = 3.5e-06, P = 3.5e-06
Identities = 42/160 (26%), Positives = 73/160 (45%)
Query: 6 VTPIS-QMAEFPLEPNLSKMLIMSVHLQCSDEVLTIVSMLSVQNVFYRPXXXXXXXXXXX 64
+TP+ +A P+EP++ KM++ C D VLTI + LS ++ F P
Sbjct: 686 LTPLGVHLARLPVEPHIGKMILFGALFCCLDPVLTIAASLSFKDPFVIPLGKEKIADARR 745
Query: 65 XXF-NQMEGDHITLLAVYNSW-----RNNKFSNAWCYENFVQIRTLKRAQDVRKQ----L 114
DH+T++ + W R ++ +C+E F+ TL+ +++ Q L
Sbjct: 746 KELAKDTRSDHLTVVNAFEGWEEARRRGFRYEKDYCWEYFLSSNTLQMLHNMKGQFAEHL 805
Query: 115 LG---IMDRHKLDVVS-AGKNTVRVQKAV-CSGFFRNAAK 149
LG + R+ D S + ++ KAV C+G + AK
Sbjct: 806 LGAGFVSSRNPKDPESNINSDNEKIIKAVICAGLYPKVAK 845
Score = 110 (43.8 bits), Expect = 2.8e-15, Sum P(4) = 2.8e-15
Identities = 25/52 (48%), Positives = 34/52 (65%)
Query: 245 LLKQAVKKRPEIKLIVTSATLDAVKFSSYFFEAPIFTIPGRTFPVEVLYTKE 296
++K + R ++K+I+ SATL+A KFS YF P+ IPG TFPV V Y E
Sbjct: 349 VVKDLLNFRSDLKVILMSATLNAEKFSEYFGNCPMIHIPGFTFPV-VEYLLE 399
Score = 74 (31.1 bits), Expect = 3.9e-06, Sum P(4) = 3.9e-06
Identities = 30/112 (26%), Positives = 49/112 (43%)
Query: 333 KQLLG---IMDRHKLDVVS-AGKNTVRVQKAV-CSGFFR-------NAAKKDPQEGYRTL 380
+ LLG + R+ D S + ++ KAV C+G + N KK T
Sbjct: 803 EHLLGAGFVSSRNPKDPESNINSDNEKIIKAVICAGLYPKVAKIRLNLGKKRKMVKVYTK 862
Query: 381 VDSQVVYIHPSSALFNRQP---EWVIYHELVQTTKEYMREVTSIDPKWLVEF 429
D +V +HP S + W+IYH ++T+ Y+ + T + P L+ F
Sbjct: 863 TDG-LVAVHPKSVNVEQTDFHYNWLIYHLKMRTSSIYLYDCTEVSPYCLLFF 913
Score = 48 (22.0 bits), Expect = 2.8e-15, Sum P(4) = 2.8e-15
Identities = 13/32 (40%), Positives = 18/32 (56%)
Query: 298 ETDYLDASLITVM--QIHLREPPGDVLLFLTG 327
E D +D +LI + I L E G +L+FL G
Sbjct: 466 EDDKVDLNLIVALIRYIVLEEEDGAILVFLPG 497
Score = 44 (20.5 bits), Expect = 2.8e-15, Sum P(4) = 2.8e-15
Identities = 9/27 (33%), Positives = 18/27 (66%)
Query: 110 VRKQLLGIMDRHKLDVVSA----GKNT 132
++K+L+ ++D H++ V+S GK T
Sbjct: 212 MQKELVNLIDNHQVTVISGETGCGKTT 238
Score = 44 (20.5 bits), Expect = 1.1e-07, Sum P(2) = 1.1e-07
Identities = 9/27 (33%), Positives = 18/27 (66%)
Query: 331 VRKQLLGIMDRHKLDVVSA----GKNT 353
++K+L+ ++D H++ V+S GK T
Sbjct: 212 MQKELVNLIDNHQVTVISGETGCGKTT 238
>ZFIN|ZDB-GENE-030131-4505 [details] [associations]
symbol:dhx37 "DEAH (Asp-Glu-Ala-His) box
polypeptide 37" species:7955 "Danio rerio" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005575
"cellular_component" evidence=ND] [GO:0016787 "hydrolase activity"
evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR003593 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00382 SMART:SM00490 SMART:SM00847
ZFIN:ZDB-GENE-030131-4505 GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 GeneTree:ENSGT00550000074985 KO:K14780
CTD:57647 HOVERGEN:HBG051356 OMA:AKLQPRT EMBL:CABZ01014508
EMBL:CABZ01038687 EMBL:CABZ01038688 EMBL:CABZ01038689
EMBL:CABZ01038690 EMBL:CABZ01038691 EMBL:CABZ01038692
EMBL:CABZ01038693 EMBL:CABZ01038694 EMBL:CABZ01038695
EMBL:CABZ01038696 EMBL:CU469504 EMBL:FP085395 IPI:IPI00488738
RefSeq:NP_001076473.2 UniGene:Dr.79711 Ensembl:ENSDART00000090731
Ensembl:ENSDART00000127153 GeneID:100009635 KEGG:dre:100009635
NextBio:20787816 Uniprot:B8JLP0
Length = 1152
Score = 158 (60.7 bits), Expect = 3.4e-15, Sum P(2) = 3.4e-15
Identities = 32/55 (58%), Positives = 39/55 (70%)
Query: 487 PDVPELIILPVYSALPSEMQTRIFEAAPPGSRKVVIATNIAETSLTIDGIFYVVD 541
P +P L +LP+YS L E Q ++F P GSR V+ATN+AETSLTI GI YVVD
Sbjct: 576 PSIP-LYVLPLYSLLAPEQQAKVFRPPPAGSRLCVVATNVAETSLTIPGIKYVVD 629
Score = 149 (57.5 bits), Expect = 3.3e-14, Sum P(2) = 3.3e-14
Identities = 29/70 (41%), Positives = 43/70 (61%)
Query: 372 DPQ--EGYRTLVDSQVVYIHPSSALFNRQPEWVIYHELVQTTKEYMREVTSIDPKWLVEF 429
DP+ Y+T + V+IHPSSAL PE+V+Y E+++TTK YMR V ++ W+ +
Sbjct: 940 DPKWRNAYKTPLLDDPVFIHPSSALHKTLPEFVVYQEIMETTKMYMRGVCAVQDDWIPKL 999
Query: 430 APAFFKFSDP 439
P + FS P
Sbjct: 1000 LPQYCHFSAP 1009
Score = 149 (57.5 bits), Expect = 7.5e-10, Sum P(3) = 7.5e-10
Identities = 29/70 (41%), Positives = 43/70 (61%)
Query: 151 DPQ--EGYRTLVDSQVVYIHPSSALFNRQPEWVIYHELVQTTKEYMREVTSIDPKWLVEF 208
DP+ Y+T + V+IHPSSAL PE+V+Y E+++TTK YMR V ++ W+ +
Sbjct: 940 DPKWRNAYKTPLLDDPVFIHPSSALHKTLPEFVVYQEIMETTKMYMRGVCAVQDDWIPKL 999
Query: 209 APAFFKFSDP 218
P + FS P
Sbjct: 1000 LPQYCHFSAP 1009
Score = 122 (48.0 bits), Expect = 3.4e-15, Sum P(2) = 3.4e-15
Identities = 35/97 (36%), Positives = 50/97 (51%)
Query: 244 GLLKQAV----KKRPEIKLIVTSATLDAVKFSSY--FFEAP--IFTIPGRTFPVEVLYTK 295
GLL + V KK +KLI+ SATL F+ F +P + + R F V V + K
Sbjct: 386 GLLSRIVPLRNKKGLPMKLIIMSATLRVEDFTENKRLFSSPPPVIKVEARQFAVTVHFNK 445
Query: 296 E-PETDYLDASLITVMQIHLREPPGDVLLFLTGKLDV 331
P DY + + +IH PPG +L+FLTG+ +V
Sbjct: 446 RTPMDDYTGETFRKICKIHRMLPPGGILVFLTGQAEV 482
Score = 86 (35.3 bits), Expect = 7.5e-10, Sum P(3) = 7.5e-10
Identities = 17/49 (34%), Positives = 30/49 (61%)
Query: 3 SLVVTPISQ-MAEFPLEPNLSKMLIMSVHLQCSDEVLTIVSMLSVQNVF 50
S ++P+ + MA FP+ P +KML + C ++TIVS ++V+ +F
Sbjct: 757 SCPISPLGRAMAAFPVAPRYAKMLALGRQQGCMQYIITIVSAMTVREIF 805
Score = 38 (18.4 bits), Expect = 7.5e-10, Sum P(3) = 7.5e-10
Identities = 10/43 (23%), Positives = 20/43 (46%)
Query: 72 GDHITLLAVYNSWRNNKFSNAWCYENFVQIRTLKRAQDVRKQL 114
GD + LL + + +C EN ++ + + + +R QL
Sbjct: 845 GDLMVLLGAVGACEFAGLTPQFCEENGLRFKAMLEIRRLRGQL 887
>UNIPROTKB|Q5THQ9 [details] [associations]
symbol:DHX35 "Probable ATP-dependent RNA helicase DHX35"
species:9606 "Homo sapiens" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] InterPro:IPR002464
PROSITE:PS00690 GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 EMBL:AL023803
UniGene:Hs.444520 HGNC:HGNC:15861 IPI:IPI01009669 SMR:Q5THQ9
Ensembl:ENST00000441485 HOGENOM:HOG000202213 HOVERGEN:HBG079487
Uniprot:Q5THQ9
Length = 302
Score = 211 (79.3 bits), Expect = 3.7e-15, P = 3.7e-15
Identities = 56/150 (37%), Positives = 85/150 (56%)
Query: 217 DPTKLSKFKKNQRLEPLQRTNRISFPPGLLKQAVKKRPEIKLIVTSATLDAVKFSSYFFE 276
DP L+K+ E +RT GLLK+ KKR +++LIV SATLDA KF +F +
Sbjct: 129 DPL-LTKYSVIMLDEAHERTLYTDIAIGLLKKIQKKRGDLRLIVASATLDADKFRDFFNQ 187
Query: 277 A----P------IFTIPGRTFPVEVLYTKEPETDYLDASLITVMQIHLREPPGDVLLFLT 326
P I T+ GRTFPV++ Y + P DY+ +++ TV++IH E GDVL FLT
Sbjct: 188 NETSDPARDTCVILTVEGRTFPVDIFYLQSPVPDYIKSTVETVVKIHQTEGDGDVLAFLT 247
Query: 327 GKLDVRKQLLGIMDRHKLDVVSAGKNTVRV 356
G+ +V + ++++ + + K +RV
Sbjct: 248 GQEEVETVVSMLIEQARALARTGMKRHLRV 277
>TAIR|locus:2038796 [details] [associations]
symbol:AT2G01130 species:3702 "Arabidopsis thaliana"
[GO:0003676 "nucleic acid binding" evidence=IEA;ISS] [GO:0003723
"RNA binding" evidence=IEA] [GO:0003725 "double-stranded RNA
binding" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA;ISS] [GO:0005524 "ATP binding" evidence=IEA;ISS]
[GO:0005622 "intracellular" evidence=IEA] [GO:0005634 "nucleus"
evidence=ISM] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] InterPro:IPR001159 InterPro:IPR001650
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00035 Pfam:PF00270
Pfam:PF00271 Pfam:PF04408 PROSITE:PS51194 SMART:SM00358
SMART:SM00490 SMART:SM00847 InterPro:IPR014720 GO:GO:0005524
EMBL:CP002685 Gene3D:3.30.160.20 GO:GO:0005622 GO:GO:0003725
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 KO:K14442 IPI:IPI00528464
RefSeq:NP_178223.2 UniGene:At.42514 ProteinModelPortal:F4IM84
SMR:F4IM84 PRIDE:F4IM84 EnsemblPlants:AT2G01130.1 GeneID:814642
KEGG:ath:AT2G01130 OMA:PSWISKV Uniprot:F4IM84
Length = 1113
Score = 225 (84.3 bits), Expect = 6.2e-15, P = 6.2e-15
Identities = 54/217 (24%), Positives = 107/217 (49%)
Query: 12 MAEFPLEPNLSKMLIMSVHLQCSDEVLTIVSMLSVQNVFYRPXXXXXXXXXXXXXFNQME 71
+++ P+EP L KMLI+ L C D +LT+ + LSV++ F P F++
Sbjct: 704 LSKLPMEPKLGKMLILGAILGCLDPILTVAAGLSVRDPFLTPQDKKDLAEAAKSQFSRDH 763
Query: 72 GDHITLLAVYNSWRNNKFSNA---WCYENFVQIRTLKRAQDVRKQLLGIM-DRHKLD--- 124
DH+ L+ Y W+ + +A +C++NF+ I++L+ +RK+ ++ D +D
Sbjct: 764 SDHLALVRAYEGWKKAEEESAVYDYCWKNFLSIQSLRAIDSLRKEFFSLLKDTGLIDGNP 823
Query: 125 -VVSAGKNTVRVQKAV-CSGFFRNAAKKDPQE---GYRTLVDSQVV-YIHPSSALFNRQP 178
+ ++ N + +AV C G + E +T+ D QV+ Y + +A + P
Sbjct: 824 SICNSEGNDANLTRAVICYGMYPGICSVVHNERSFSLKTMEDGQVLLYSNSENARETKIP 883
Query: 179 -EWVIYHELVQTTKEYMREVTSIDPKWLVEFAPAFFK 214
W++++E ++ ++R+ T+ L+ F + K
Sbjct: 884 YPWLVFNEKIKVNSVFLRDSTACSDSTLILFGGSISK 920
Score = 118 (46.6 bits), Expect = 7.2e-10, Sum P(2) = 7.2e-10
Identities = 25/45 (55%), Positives = 32/45 (71%)
Query: 245 LLKQAVKKRPEIKLIVTSATLDAVKFSSYFFEAPIFTIPGRTFPV 289
+LK + +R E+KLI+ SATLDA FSSYF A + IPG T+PV
Sbjct: 359 ILKDLLSRRSELKLILMSATLDAELFSSYFGGAGVIYIPGFTYPV 403
Score = 112 (44.5 bits), Expect = 7.2e-10, Sum P(2) = 7.2e-10
Identities = 23/53 (43%), Positives = 37/53 (69%)
Query: 490 PELI-ILPVYSALPSEMQTRIFEAAPPGSRKVVIATNIAETSLTIDGIFYVVD 541
P+L+ +L + ++ + Q IFE G RK+V+ATNIAETS+TI+ + +V+D
Sbjct: 527 PDLVMLLACHGSMETFEQRLIFEEPASGVRKIVLATNIAETSITINDVAFVID 579
Score = 72 (30.4 bits), Expect = 9.3e-06, Sum P(2) = 9.3e-06
Identities = 21/104 (20%), Positives = 46/104 (44%)
Query: 337 GIMDRHKLDVVSAGKNTVRVQKAVCSGFFRNAAKKDPQE---GYRTLVDSQVV-YIHPSS 392
G++D + S G + + +C G + E +T+ D QV+ Y + +
Sbjct: 817 GLIDGNPSICNSEGNDANLTRAVICYGMYPGICSVVHNERSFSLKTMEDGQVLLYSNSEN 876
Query: 393 ALFNRQP-EWVIYHELVQTTKEYMREVTSIDPKWLVEFAPAFFK 435
A + P W++++E ++ ++R+ T+ L+ F + K
Sbjct: 877 ARETKIPYPWLVFNEKIKVNSVFLRDSTACSDSTLILFGGSISK 920
Score = 55 (24.4 bits), Expect = 0.00050, Sum P(2) = 0.00050
Identities = 29/133 (21%), Positives = 52/133 (39%)
Query: 300 DYLDASLITVMQIHL--REPPGDVLLFLTGKLDVRKQLLGIMDRHKLDVVSAGKNTVRVQ 357
D + +LI + ++ E PG +L+FLTG D+ + KL + N V
Sbjct: 478 DCIGFNLIEFLLCNICENEGPGGILIFLTGWDDISSL------KEKLQIHPIFGNPDLVM 531
Query: 358 KAVCSG----FFRNAAKKDPQEGYRTLVDSQVVYIHPSSALFNRQPEWVIYHELVQTTKE 413
C G F + ++P G R +V I +S N + + +T+ +
Sbjct: 532 LLACHGSMETFEQRLIFEEPASGVRKIV--LATNIAETSITINDVAFVIDCGKAKETSYD 589
Query: 414 YMREVTSIDPKWL 426
+ + P W+
Sbjct: 590 ALNNTPCLLPSWI 602
>POMBASE|SPAPB1A10.06c [details] [associations]
symbol:SPAPB1A10.06c "ATP-dependent RNA helicase Dhr1
(predicted)" species:4896 "Schizosaccharomyces pombe" [GO:0003723
"RNA binding" evidence=IEA] [GO:0003724 "RNA helicase activity"
evidence=ISO] [GO:0004004 "ATP-dependent RNA helicase activity"
evidence=ISM] [GO:0005524 "ATP binding" evidence=ISM] [GO:0005634
"nucleus" evidence=IDA] [GO:0005730 "nucleolus" evidence=IDA]
[GO:0030490 "maturation of SSU-rRNA" evidence=ISO] [GO:0032040
"small-subunit processome" evidence=ISO] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 PomBase:SPAPB1A10.06c
GO:GO:0005524 EMBL:CU329670 GO:GO:0005730 GO:GO:0003723
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643
InterPro:IPR011709 Pfam:PF07717 GO:GO:0004004 GO:GO:0032040
GO:GO:0030490 HOGENOM:HOG000201240 KO:K14780 OMA:HQLKREE
OrthoDB:EOG4KM2B8 EMBL:AB027915 RefSeq:NP_593520.1
ProteinModelPortal:Q9HDY4 STRING:Q9HDY4
EnsemblFungi:SPAPB1A10.06c.1 GeneID:2543371 KEGG:spo:SPAPB1A10.06c
NextBio:20804386 Uniprot:Q9HDY4
Length = 1183
Score = 139 (54.0 bits), Expect = 9.2e-15, Sum P(2) = 9.2e-15
Identities = 25/50 (50%), Positives = 38/50 (76%)
Query: 492 LIILPVYSALPSEMQTRIFEAAPPGSRKVVIATNIAETSLTIDGIFYVVD 541
+ +LP+YS L +E Q ++F+++P G R ++ATN+AETS+TI I YVVD
Sbjct: 702 MYVLPLYSLLTTEDQMKVFDSSPEGHRMCIVATNVAETSITIPNIRYVVD 751
Score = 138 (53.6 bits), Expect = 9.2e-15, Sum P(2) = 9.2e-15
Identities = 51/176 (28%), Positives = 83/176 (47%)
Query: 247 KQAVKKRPEIKLIVTSATLDAVKFSS--YFFEAP--IFTIPGRTFPVEVLYTKEPETDYL 302
K K +P +KLI+ SATL FS F P I I R +PV + + + + DYL
Sbjct: 550 KSDQKVKP-LKLIIMSATLRVTDFSENKLLFSVPPPIIKIDARQYPVSIHFNRTTKPDYL 608
Query: 303 DASLITVMQIHLREPPGDVLLFLTGKLDVRKQLLGIMDRHKLDVVSAGKNTVRVQKAVCS 362
+ V IH R P G +L+FLTG+ +V +QL ++ + + K+ R+ V S
Sbjct: 609 QDAFDKVCLIHKRLPAGSILVFLTGQQEV-EQLCQMLRKRFVRSFRPLKSRARI---VVS 664
Query: 363 GFFRNAAKKDPQEGYRTLVDSQVVYIHPSSALFN--RQPEWVIYHELVQTTKEYMR 416
+ +D Q + QV SS ++ +P +V+ + TT++ M+
Sbjct: 665 RKTMSVENEDLQSETEDI--DQVPTSSSSSVTYDDESEPMYVLPLYSLLTTEDQMK 718
Score = 109 (43.4 bits), Expect = 2.8e-06, Sum P(2) = 2.8e-06
Identities = 42/161 (26%), Positives = 75/161 (46%)
Query: 75 ITLLAVYNSWRNNKFSNAWCYENFVQIRTLKRAQDVRKQLLGIMDRHKLDVVSAG----- 129
++LL+ ++ +C EN+++ + L+ ++RKQ++G++ R+ + V
Sbjct: 971 LSLLSAVCAYDYASDKRKFCKENYLREKALEEVTNLRKQIIGLLKRYMVRVEKEFFKLQL 1030
Query: 130 KNTVRVQ-KA----VCSGFFRNAAKKDPQE-GYRTLVDS--QVVYIHPSSALFNRQPEWV 181
K VQ KA + S + A D ++ GY TL S +VV P +N E+V
Sbjct: 1031 KPPTSVQIKALRQFIASAYIDQVALYDKEKRGYVTLFPSGSEVVQFVPDRT-YNIDSEYV 1089
Query: 182 IYHELVQTT--KEYMREVTSIDPKWLVEFAP--AFFKFSDP 218
+Y L ++ + YM +T I P+ L A +S P
Sbjct: 1090 VYLSLHESRSGRVYMSPLTEISPEHLARLAKNTTLLSYSKP 1130
Score = 87 (35.7 bits), Expect = 2.8e-06, Sum P(2) = 2.8e-06
Identities = 20/47 (42%), Positives = 28/47 (59%)
Query: 5 VVTPIS-QMAEFPLEPNLSKMLIMSVHLQCSDEVLTIVSMLSVQNVF 50
V+T + QM+ FPL P SKMLI+ C V+ +VS LS+ +F
Sbjct: 867 VLTKLGEQMSLFPLSPRFSKMLIIGQQHGCLPYVIALVSALSINQLF 913
Score = 37 (18.1 bits), Expect = 0.00030, Sum P(2) = 0.00030
Identities = 9/30 (30%), Positives = 13/30 (43%)
Query: 481 RMKSLGPDVPELIILPVYSALPSEMQTRIF 510
R +++ PD P L +L A R F
Sbjct: 960 RFQAIDPDAPALSLLSAVCAYDYASDKRKF 989
>TAIR|locus:2007003 [details] [associations]
symbol:FAS4 "FASCIATED STEM 4" species:3702 "Arabidopsis
thaliana" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA;ISS] [GO:0005524 "ATP
binding" evidence=IEA;ISS] [GO:0005634 "nucleus" evidence=ISM]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408
PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
EMBL:CP002684 GO:GO:0005524 GO:GO:0003676 EMBL:AC051630
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 HOGENOM:HOG000201240 KO:K14780
IPI:IPI00531863 PIR:E86457 RefSeq:NP_174605.1 UniGene:At.39951
ProteinModelPortal:Q9C813 SMR:Q9C813 STRING:Q9C813 PRIDE:Q9C813
EnsemblPlants:AT1G33390.1 GeneID:840232 KEGG:ath:AT1G33390
TAIR:At1g33390 InParanoid:Q9C813 OMA:EVQWISK PhylomeDB:Q9C813
ProtClustDB:CLSN2693169 Genevestigator:Q9C813 Uniprot:Q9C813
Length = 1237
Score = 149 (57.5 bits), Expect = 6.2e-07, Sum P(3) = 6.2e-07
Identities = 29/84 (34%), Positives = 47/84 (55%)
Query: 137 KAVCSGFFRNAAKKDPQEGYRTLVDSQVVYIHPSSALFNRQPEWVIYHELVQTTKEYMRE 196
+A+C+G+ A+K Y+ + V++H S+L N PE ++Y EL+ T + YM
Sbjct: 1010 EAICAGWADRVARKTRATEYQACAVQEPVFLHRWSSLINSAPELLVYSELLLTNRPYMHG 1069
Query: 197 VTSIDPKWLVEFAPAFFKFSDPTK 220
T + P+WLV+ A + FS P K
Sbjct: 1070 ATRVRPEWLVKHAKSLCVFSAPLK 1093
Score = 149 (57.5 bits), Expect = 6.2e-07, Sum P(3) = 6.2e-07
Identities = 29/84 (34%), Positives = 47/84 (55%)
Query: 358 KAVCSGFFRNAAKKDPQEGYRTLVDSQVVYIHPSSALFNRQPEWVIYHELVQTTKEYMRE 417
+A+C+G+ A+K Y+ + V++H S+L N PE ++Y EL+ T + YM
Sbjct: 1010 EAICAGWADRVARKTRATEYQACAVQEPVFLHRWSSLINSAPELLVYSELLLTNRPYMHG 1069
Query: 418 VTSIDPKWLVEFAPAFFKFSDPTK 441
T + P+WLV+ A + FS P K
Sbjct: 1070 ATRVRPEWLVKHAKSLCVFSAPLK 1093
Score = 141 (54.7 bits), Expect = 9.9e-15, Sum P(2) = 9.9e-15
Identities = 41/127 (32%), Positives = 62/127 (48%)
Query: 256 IKLIVTSATLDAVKFSS--YFFE--APIFTIPGRTFPVEVLYTKEPE-TDYLDASLITVM 310
+KLI+ SATL F S F P+ +P R +PV + ++K+ E DY+ + VM
Sbjct: 416 LKLILMSATLRVEDFVSGKRLFPNIPPLIEVPTRQYPVTIHFSKKTEIVDYIGEAYKKVM 475
Query: 311 QIHLREPPGDVLLFLTGKLDVRKQLLGIMDRHKLDVVSAGKNTVRVQKAVCSGFFRNAAK 370
IH + P G +L+F+TG+ +V + K VV A K V+K G F
Sbjct: 476 SIHKKLPQGGILVFVTGQREVDYLCEKLRKSSKELVVQAAKRDAYVKKKCDDGSFGGVDM 535
Query: 371 KDPQEGY 377
K+ E +
Sbjct: 536 KEIAEAF 542
Score = 136 (52.9 bits), Expect = 9.9e-15, Sum P(2) = 9.9e-15
Identities = 29/58 (50%), Positives = 39/58 (67%)
Query: 491 ELIILPVYSALPSEMQTRIFEAAPPGSRKVVIATNIAETSLTIDGIFYVVDPFDIEVR 548
+L +LP+Y+ L Q R+FE R VV+ATN+AETSLTI GI YVVD ++V+
Sbjct: 646 KLRVLPLYAMLSPAAQLRVFEEVEKEERLVVVATNVAETSLTIPGIKYVVDTGRVKVK 703
Score = 48 (22.0 bits), Expect = 6.2e-07, Sum P(3) = 6.2e-07
Identities = 8/27 (29%), Positives = 18/27 (66%)
Query: 6 VTPISQ-MAEFPLEPNLSKMLIMSVHL 31
+TP+ + M+ +P+ P S+ML+ + +
Sbjct: 813 LTPLGKAMSHYPMSPRHSRMLLTVIQM 839
Score = 48 (22.0 bits), Expect = 6.2e-07, Sum P(3) = 6.2e-07
Identities = 10/52 (19%), Positives = 26/52 (50%)
Query: 67 FNQMEGDHITLLAVYNSWRNNKFSNAWCYENFVQIRTLKRAQDVRKQLLGIM 118
F+ D +T+ +S+ ++ +C N + ++T+ ++ QLL ++
Sbjct: 910 FSNPSSDALTVAYALHSFEVSENGMGFCEANGLHLKTMDEMSKLKDQLLRLV 961
>UNIPROTKB|F5H3Y4 [details] [associations]
symbol:DHX37 "Probable ATP-dependent RNA helicase DHX37"
species:9606 "Homo sapiens" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR001650 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS51194
SMART:SM00490 SMART:SM00847 GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 IPI:IPI00217630 HGNC:HGNC:17210
EMBL:AC093719 ProteinModelPortal:F5H3Y4 SMR:F5H3Y4
Ensembl:ENST00000544745 ArrayExpress:F5H3Y4 Bgee:F5H3Y4
Uniprot:F5H3Y4
Length = 962
Score = 158 (60.7 bits), Expect = 1.2e-14, Sum P(2) = 1.2e-14
Identities = 27/66 (40%), Positives = 44/66 (66%)
Query: 374 QEGYRTLVDSQVVYIHPSSALFNRQPEWVIYHELVQTTKEYMREVTSIDPKWLVEFAPAF 433
+ Y+T + V+IHPSS LF PE+V+Y E+V+TTK YM+ V+S++ +W+ P++
Sbjct: 739 RNAYKTPLLDDPVFIHPSSVLFKELPEFVVYQEIVETTKMYMKGVSSVEVQWIPALLPSY 798
Query: 434 FKFSDP 439
+F P
Sbjct: 799 CQFDKP 804
Score = 158 (60.7 bits), Expect = 1.6e-10, Sum P(2) = 1.6e-10
Identities = 27/66 (40%), Positives = 44/66 (66%)
Query: 153 QEGYRTLVDSQVVYIHPSSALFNRQPEWVIYHELVQTTKEYMREVTSIDPKWLVEFAPAF 212
+ Y+T + V+IHPSS LF PE+V+Y E+V+TTK YM+ V+S++ +W+ P++
Sbjct: 739 RNAYKTPLLDDPVFIHPSSVLFKELPEFVVYQEIVETTKMYMKGVSSVEVQWIPALLPSY 798
Query: 213 FKFSDP 218
+F P
Sbjct: 799 CQFDKP 804
Score = 146 (56.5 bits), Expect = 2.4e-13, Sum P(2) = 2.4e-13
Identities = 31/56 (55%), Positives = 39/56 (69%)
Query: 487 PDVP-ELIILPVYSALPSEMQTRIFEAAPPGSRKVVIATNIAETSLTIDGIFYVVD 541
PD L +LP+YS L E Q ++F+ P G+R V+ATN+AETSLTI GI YVVD
Sbjct: 369 PDASLPLHVLPLYSLLAPEKQAQVFKPPPEGTRLCVVATNVAETSLTIPGIKYVVD 424
Score = 115 (45.5 bits), Expect = 1.2e-14, Sum P(2) = 1.2e-14
Identities = 34/97 (35%), Positives = 49/97 (50%)
Query: 244 GLLKQAV----KKRPEIKLIVTSATLDAVKFSS---YFFEAP-IFTIPGRTFPVEVLYTK 295
GLL + V K+ +KL++ SATL F+ F + P + + R FPV V + K
Sbjct: 173 GLLSRIVTLRAKRNLPLKLLIMSATLRVEDFTQNPRLFAKPPPVIKVESRQFPVTVHFNK 232
Query: 296 E-PETDYLDASLITVMQIHLREPPGDVLLFLTGKLDV 331
P DY V +IH P G +L+FLTG+ +V
Sbjct: 233 RTPLEDYSGECFRKVCKIHRMLPAGGILVFLTGQAEV 269
Score = 75 (31.5 bits), Expect = 1.6e-10, Sum P(2) = 1.6e-10
Identities = 17/49 (34%), Positives = 29/49 (59%)
Query: 3 SLVVTPISQ-MAEFPLEPNLSKMLIMSVHLQCSDEVLTIVSMLSVQNVF 50
S +T + + MA FP+ P +KML +S C +TIV+ ++V+ +F
Sbjct: 552 SCPITALGRTMATFPVAPRYAKMLALSRQHGCLPYAITIVASMTVRELF 600
>UNIPROTKB|G4NGS5 [details] [associations]
symbol:MGG_04040 "DEAH box polypeptide 37" species:242507
"Magnaporthe oryzae 70-15" [GO:0005575 "cellular_component"
evidence=ND] [GO:0008150 "biological_process" evidence=ND]
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR003593
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00382
SMART:SM00490 SMART:SM00847 GO:GO:0005524 GO:GO:0003676
EMBL:CM001236 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026 KO:K14780
RefSeq:XP_003719802.1 ProteinModelPortal:G4NGS5
EnsemblFungi:MGG_04040T0 GeneID:2677154 KEGG:mgr:MGG_04040
Uniprot:G4NGS5
Length = 1185
Score = 159 (61.0 bits), Expect = 1.2e-14, Sum P(2) = 1.2e-14
Identities = 34/62 (54%), Positives = 42/62 (67%)
Query: 480 ERMKSLGPDVPELIILPVYSALPSEMQTRIFEAAPPGSRKVVIATNIAETSLTIDGIFYV 539
E GP + +LP+YS LP++ Q R+FE P GSR VV+ATN+AETSLTI GI YV
Sbjct: 665 EEEAGTGPS--RMHVLPLYSLLPTKEQLRVFEPPPDGSRLVVLATNVAETSLTIPGIRYV 722
Query: 540 VD 541
D
Sbjct: 723 FD 724
Score = 116 (45.9 bits), Expect = 1.2e-14, Sum P(2) = 1.2e-14
Identities = 24/80 (30%), Positives = 47/80 (58%)
Query: 256 IKLIVTSATL---DAVKFSSYFFEAP-IFTIPGRTFPVEVLYTKEPETDYLDASLITVMQ 311
+KL++ SATL D + + F P + + GR +PV + + ++ DY++ + + +
Sbjct: 517 LKLVIMSATLRIEDLTENKNLFATPPPVLEVEGRQYPVTLHFARKTHHDYVEEAFRKISR 576
Query: 312 IHLREPPGDVLLFLTGKLDV 331
H + PPG +L+FLTG+ ++
Sbjct: 577 GHKKLPPGGMLVFLTGQNEI 596
Score = 55 (24.4 bits), Expect = 0.00094, Sum P(2) = 0.00094
Identities = 12/30 (40%), Positives = 20/30 (66%)
Query: 382 DSQVVYIHPSSALFNRQ----PEWVIYHEL 407
+ ++VYIHPSS L + P+++IY+ L
Sbjct: 1062 EEKLVYIHPSSPLAHLSTSECPDYIIYNYL 1091
Score = 41 (19.5 bits), Expect = 6.7e-07, Sum P(2) = 6.7e-07
Identities = 13/45 (28%), Positives = 20/45 (44%)
Query: 282 IPGRTFPVEVLYTKEPETDYLDASLITVMQIHLREPPGDVLLFLT 326
+PG E+LY K E + D + + + P DVL+ T
Sbjct: 127 LPGNATREELLYEKREERNVSDQEEDSESEAQAQPKP-DVLVSST 170
>UNIPROTKB|H7C109 [details] [associations]
symbol:DHX57 "Putative ATP-dependent RNA helicase DHX57"
species:9606 "Homo sapiens" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR007502 Pfam:PF00271 Pfam:PF04408 PROSITE:PS51194
SMART:SM00490 SMART:SM00847 GO:GO:0005524 GO:GO:0003676
GO:GO:0004386 EMBL:AC018693 InterPro:IPR011709 Pfam:PF07717
HGNC:HGNC:20086 ChiTaRS:DHX57 Ensembl:ENST00000452978
Uniprot:H7C109
Length = 665
Score = 134 (52.2 bits), Expect = 1.4e-14, Sum P(3) = 1.4e-14
Identities = 25/52 (48%), Positives = 37/52 (71%)
Query: 245 LLKQAVKKRPEIKLIVTSATLDAVKFSSYFFEAPIFTIPGRTFPVEVLYTKE 296
+LK V +RP +++I+ SATL+A FS YF P+ TIPGRTFPV+ + ++
Sbjct: 7 VLKDIVSQRPGLQVILMSATLNAELFSDYFNSCPVITIPGRTFPVDQFFLED 58
Score = 133 (51.9 bits), Expect = 1.4e-14, Sum P(3) = 1.4e-14
Identities = 25/49 (51%), Positives = 36/49 (73%)
Query: 493 IILPVYSALPSEMQTRIFEAAPPGSRKVVIATNIAETSLTIDGIFYVVD 541
+I P++S+L SE Q +F P G K++I+TNIAETS+TID + YV+D
Sbjct: 206 VIHPLHSSLSSEEQQAVFVKPPAGVTKIIISTNIAETSITIDDVVYVID 254
Score = 131 (51.2 bits), Expect = 5.2e-05, P = 5.2e-05
Identities = 40/214 (18%), Positives = 92/214 (42%)
Query: 6 VTPIS-QMAEFPLEPNLSKMLIMSVHLQCSDEVLTIVSMLSVQNVFYRPXXXXXXXXXXX 64
+TP+ +A P++ + K+++ +C D LTI + L+ ++ F P
Sbjct: 376 LTPLGYHLASLPVDVRIGKLMLFGSIFRCLDPALTIAASLAFKSPFVSPWDKKEEANQKK 435
Query: 65 XXFNQMEGDHITLLAVYNSWRNN-----KFSNAWCYENFVQIRTLKRAQDVRKQLLGIMD 119
F D++ LL Y W+ + + S +C +NF+ R L+ +++Q ++
Sbjct: 436 LEFAFANSDYLALLQAYKGWQLSTKEGVRASYNYCRQNFLSGRVLQEMASLKRQFTELLS 495
Query: 120 RHKLDVVSAGKNTVRVQKAVCSGF-FRNAAKKDPQEGYRT--LVDSQV-VYIHPSSALFN 175
+ G ++K G +A ++ L+ + + ++P+
Sbjct: 496 --DIGFAREGLRAREIEKRAQGGDGVLDATGEEANSNAENPKLISAMLCAALYPNVVQVR 553
Query: 176 R-QPEWVIYHELVQTTKEYMREVTSIDPKWLVEF 208
+++YHE ++T++ ++R+ + + LV F
Sbjct: 554 HFDSPYLLYHEKIKTSRVFIRDCSMVSVYPLVLF 587
Score = 49 (22.3 bits), Expect = 4.1e-06, Sum P(3) = 4.1e-06
Identities = 8/29 (27%), Positives = 20/29 (68%)
Query: 401 WVIYHELVQTTKEYMREVTSIDPKWLVEF 429
+++YHE ++T++ ++R+ + + LV F
Sbjct: 559 YLLYHEKIKTSRVFIRDCSMVSVYPLVLF 587
Score = 45 (20.9 bits), Expect = 1.4e-14, Sum P(3) = 1.4e-14
Identities = 7/16 (43%), Positives = 12/16 (75%)
Query: 317 PPGDVLLFLTGKLDVR 332
PPG +L+FL G +++
Sbjct: 170 PPGAILVFLPGLAEIK 185
>UNIPROTKB|E1C550 [details] [associations]
symbol:DHX36 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0003725
"double-stranded RNA binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0009615
"response to virus" evidence=IEA] [GO:0043330 "response to
exogenous dsRNA" evidence=IEA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0005634 GO:GO:0005737 GO:GO:0003725 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 GO:GO:0043330 GeneTree:ENSGT00550000074257
OMA:GRIAYND EMBL:AADN02021100 IPI:IPI00601151
Ensembl:ENSGALT00000016841 Uniprot:E1C550
Length = 985
Score = 159 (61.0 bits), Expect = 1.6e-14, Sum P(3) = 1.6e-14
Identities = 28/49 (57%), Positives = 41/49 (83%)
Query: 493 IILPVYSALPSEMQTRIFEAAPPGSRKVVIATNIAETSLTIDGIFYVVD 541
II+P++S +P+ QT++F+ PPG RK+VIATNIAETS+TID + +V+D
Sbjct: 501 IIIPLHSLMPTVNQTQVFKKTPPGVRKIVIATNIAETSITIDDVVFVID 549
Score = 134 (52.2 bits), Expect = 1.1e-07, Sum P(2) = 1.1e-07
Identities = 42/163 (25%), Positives = 74/163 (45%)
Query: 6 VTPIS-QMAEFPLEPNLSKMLIMSVHLQCSDEVLTIVSMLSVQNVFYRPXXXXXXXXXXX 64
+TP+ +A P+EP++ KM++ C D VLTI + LS ++ F P
Sbjct: 667 LTPLGVHLARLPVEPHIGKMILFGALFCCLDPVLTIAASLSFKDPFVIPLGKEKVADARR 726
Query: 65 XXFNQ-MEGDHITLLAVYNSW-----RNNKFSNAWCYENFVQIRTLKRAQDVRKQ----L 114
++ + DH+T++ + W R + +C+E F+ TL+ +++ Q L
Sbjct: 727 KELSKNTKSDHLTVVNAFTGWEETRRRGFRTEKDYCWEYFLSPNTLQMLHNMKGQFAEHL 786
Query: 115 LG---IMDRHKLDVVS-AGKNTVRVQKAV-CSGFFRNAAKKDP 152
L + R D S + ++ KAV C+G + AK P
Sbjct: 787 LAAGFVNSRDPKDPKSNTNSDNEKLLKAVICAGLYPKVAKIRP 829
Score = 111 (44.1 bits), Expect = 1.6e-14, Sum P(3) = 1.6e-14
Identities = 25/52 (48%), Positives = 34/52 (65%)
Query: 245 LLKQAVKKRPEIKLIVTSATLDAVKFSSYFFEAPIFTIPGRTFPVEVLYTKE 296
++K + R ++K+I+ SATL+A KFS YF P+ IPG TFPV V Y E
Sbjct: 330 IIKDLLNVRLDLKVILMSATLNAEKFSEYFDNCPMIHIPGFTFPV-VEYLLE 380
Score = 73 (30.8 bits), Expect = 1.1e-07, Sum P(2) = 1.1e-07
Identities = 24/85 (28%), Positives = 38/85 (44%)
Query: 134 RVQKAV-CSGFFRNAAKKDPQ-EGYRTLVD-----SQVVYIHPSSALFNRQP---EWVIY 183
++ KAV C+G + AK P R +V V IHP S W++Y
Sbjct: 810 KLLKAVICAGLYPKVAKIRPSFSKKRKMVKVCTKTDGTVNIHPKSVNVEETEFHYNWLVY 869
Query: 184 HELVQTTKEYMREVTSIDPKWLVEF 208
H ++T+ Y+ + T + P L+ F
Sbjct: 870 HLKMRTSSIYLYDCTEVSPYCLLFF 894
Score = 73 (30.8 bits), Expect = 1.1e-07, Sum P(2) = 1.1e-07
Identities = 24/85 (28%), Positives = 38/85 (44%)
Query: 355 RVQKAV-CSGFFRNAAKKDPQ-EGYRTLVD-----SQVVYIHPSSALFNRQP---EWVIY 404
++ KAV C+G + AK P R +V V IHP S W++Y
Sbjct: 810 KLLKAVICAGLYPKVAKIRPSFSKKRKMVKVCTKTDGTVNIHPKSVNVEETEFHYNWLVY 869
Query: 405 HELVQTTKEYMREVTSIDPKWLVEF 429
H ++T+ Y+ + T + P L+ F
Sbjct: 870 HLKMRTSSIYLYDCTEVSPYCLLFF 894
Score = 46 (21.3 bits), Expect = 1.6e-14, Sum P(3) = 1.6e-14
Identities = 12/32 (37%), Positives = 17/32 (53%)
Query: 298 ETDYLDASLITVMQIH--LREPPGDVLLFLTG 327
+ D +D LI + H L E G +L+FL G
Sbjct: 447 DDDKVDLDLIAALIRHIVLEEEDGAILVFLPG 478
>MGI|MGI:1919412 [details] [associations]
symbol:Dhx36 "DEAH (Asp-Glu-Ala-His) box polypeptide 36"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0003725 "double-stranded RNA binding" evidence=IDA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0009615 "response to virus"
evidence=IMP] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0043330 "response to exogenous dsRNA" evidence=IMP]
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408
PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
MGI:MGI:1919412 GO:GO:0005524 GO:GO:0005634 GO:GO:0009615
GO:GO:0003725 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
GO:GO:0043330 EMBL:CH466530 HOGENOM:HOG000247063
GeneTree:ENSGT00550000074257 CTD:170506 HOVERGEN:HBG081438
KO:K14442 OMA:RIRNRSY OrthoDB:EOG4K6G3J EMBL:AF448804 EMBL:AC114424
EMBL:AK129373 EMBL:AK013031 IPI:IPI00351266 RefSeq:NP_082412.2
UniGene:Mm.224233 ProteinModelPortal:Q8VHK9 DIP:DIP-48576N
STRING:Q8VHK9 PhosphoSite:Q8VHK9 PaxDb:Q8VHK9 PRIDE:Q8VHK9
Ensembl:ENSMUST00000029336 GeneID:72162 KEGG:mmu:72162
UCSC:uc008pjn.2 InParanoid:Q8VHK9 ChiTaRS:DHX36 NextBio:335597
CleanEx:MM_DHX36 Genevestigator:Q8VHK9
GermOnline:ENSMUSG00000027770 Uniprot:Q8VHK9
Length = 1001
Score = 162 (62.1 bits), Expect = 1.7e-14, Sum P(4) = 1.7e-14
Identities = 28/51 (54%), Positives = 42/51 (82%)
Query: 491 ELIILPVYSALPSEMQTRIFEAAPPGSRKVVIATNIAETSLTIDGIFYVVD 541
+ +I+P++S +P+ QT++F+ PPG RK+VIATNIAETS+TID + YV+D
Sbjct: 511 KFLIIPLHSLMPTVNQTQVFKKTPPGVRKIVIATNIAETSITIDDVVYVID 561
Score = 143 (55.4 bits), Expect = 1.2e-08, Sum P(2) = 1.2e-08
Identities = 41/160 (25%), Positives = 73/160 (45%)
Query: 6 VTPIS-QMAEFPLEPNLSKMLIMSVHLQCSDEVLTIVSMLSVQNVFYRPXXXXXXXXXXX 64
+TP+ +A P+EP++ KM++ C D VLTI + LS ++ F P
Sbjct: 679 LTPLGVHLARLPVEPHIGKMILFGALFCCLDPVLTIAASLSFKDPFVIPLGKEKIADARR 738
Query: 65 XXF-NQMEGDHITLLAVYNSW-----RNNKFSNAWCYENFVQIRTLKRAQDVRKQ----L 114
+ DH+T++ + W R ++ +C+E F+ TL+ +++ Q L
Sbjct: 739 KELAKETRSDHLTVVNAFEGWEEAKRRGFRYEKDYCWEYFLSSNTLQMLHNMKGQFAEHL 798
Query: 115 LG---IMDRHKLDV-VSAGKNTVRVQKAV-CSGFFRNAAK 149
LG + R D + + ++ KAV C+G + AK
Sbjct: 799 LGAGFVSSRSPKDPKANINSDNEKIIKAVICAGLYPKVAK 838
Score = 110 (43.8 bits), Expect = 1.7e-14, Sum P(4) = 1.7e-14
Identities = 25/52 (48%), Positives = 34/52 (65%)
Query: 245 LLKQAVKKRPEIKLIVTSATLDAVKFSSYFFEAPIFTIPGRTFPVEVLYTKE 296
++K + R ++K+I+ SATL+A KFS YF P+ IPG TFPV V Y E
Sbjct: 342 VIKDLLHFRSDLKVILMSATLNAEKFSEYFGNCPMIHIPGFTFPV-VEYLLE 392
Score = 73 (30.8 bits), Expect = 1.2e-08, Sum P(2) = 1.2e-08
Identities = 22/83 (26%), Positives = 38/83 (45%)
Query: 135 VQKAVCSGFFRNAAKKDPQEGY-RTLV-----DSQVVYIHPSSALFNRQP---EWVIYHE 185
++ +C+G + AK G R +V +V IHP S + W+IYH
Sbjct: 824 IKAVICAGLYPKVAKIRLNLGKKRKMVKVHTKSDGLVSIHPKSVNVEQTDFHYNWLIYHL 883
Query: 186 LVQTTKEYMREVTSIDPKWLVEF 208
++T+ Y+ + T + P L+ F
Sbjct: 884 KMRTSSIYLYDCTEVSPYCLLFF 906
Score = 73 (30.8 bits), Expect = 1.2e-08, Sum P(2) = 1.2e-08
Identities = 22/83 (26%), Positives = 38/83 (45%)
Query: 356 VQKAVCSGFFRNAAKKDPQEGY-RTLV-----DSQVVYIHPSSALFNRQP---EWVIYHE 406
++ +C+G + AK G R +V +V IHP S + W+IYH
Sbjct: 824 IKAVICAGLYPKVAKIRLNLGKKRKMVKVHTKSDGLVSIHPKSVNVEQTDFHYNWLIYHL 883
Query: 407 LVQTTKEYMREVTSIDPKWLVEF 429
++T+ Y+ + T + P L+ F
Sbjct: 884 KMRTSSIYLYDCTEVSPYCLLFF 906
Score = 45 (20.9 bits), Expect = 1.7e-14, Sum P(4) = 1.7e-14
Identities = 12/32 (37%), Positives = 18/32 (56%)
Query: 298 ETDYLDASLITVM--QIHLREPPGDVLLFLTG 327
+ D +D +LI + I L E G +L+FL G
Sbjct: 459 DDDKVDLNLIAALIRYIVLEEEDGAILVFLPG 490
Score = 42 (19.8 bits), Expect = 1.7e-07, Sum P(2) = 1.7e-07
Identities = 18/70 (25%), Positives = 33/70 (47%)
Query: 291 VLYTKEPETDYLDASLITVMQIHLREPPGDVLLFLTGKLD---VRKQLLGIMDRHKLDVV 347
+L EP LD L+ +Q +P + KL ++K+L+ +++ H++ V+
Sbjct: 163 LLQENEPNLS-LDQHLLEDLQRKKTDPRYIEMQRFRKKLPSYGMQKELVNLINNHQVTVI 221
Query: 348 SA----GKNT 353
S GK T
Sbjct: 222 SGETGCGKTT 231
Score = 39 (18.8 bits), Expect = 1.7e-14, Sum P(4) = 1.7e-14
Identities = 8/27 (29%), Positives = 18/27 (66%)
Query: 110 VRKQLLGIMDRHKLDVVSA----GKNT 132
++K+L+ +++ H++ V+S GK T
Sbjct: 205 MQKELVNLINNHQVTVISGETGCGKTT 231
>TIGR_CMR|CPS_2243 [details] [associations]
symbol:CPS_2243 "ATP-dependent helicase HrpA"
species:167879 "Colwellia psychrerythraea 34H" [GO:0004386
"helicase activity" evidence=ISS] [GO:0006139
"nucleobase-containing compound metabolic process" evidence=ISS]
InterPro:IPR001650 InterPro:IPR003593 InterPro:IPR007502
InterPro:IPR010222 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS51194 SMART:SM00382 SMART:SM00490
SMART:SM00847 GO:GO:0005524 GO:GO:0003676 EMBL:CP000083
GenomeReviews:CP000083_GR InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 HOGENOM:HOG000247272 KO:K03578 OMA:TYQFEPG
InterPro:IPR024590 Pfam:PF11898 TIGRFAMs:TIGR01967
RefSeq:YP_268968.1 ProteinModelPortal:Q482P9 STRING:Q482P9
GeneID:3518699 KEGG:cps:CPS_2243 PATRIC:21467591
BioCyc:CPSY167879:GI48-2313-MONOMER Uniprot:Q482P9
Length = 1375
Score = 145 (56.1 bits), Expect = 2.0e-14, Sum P(2) = 2.0e-14
Identities = 32/68 (47%), Positives = 44/68 (64%)
Query: 231 EPLQRTNRISFPPGLLKQAVKKRPEIKLIVTSATLDAVKFSSYF-----FEAPIFTIPGR 285
E +R+ I F G LKQ + KRP++KLI+TSAT+D +F+ +F API + GR
Sbjct: 220 EAHERSLNIDFILGYLKQILIKRPDLKLIITSATIDPQRFAKHFSSKNGLPAPIIEVSGR 279
Query: 286 TFPVEVLY 293
TFPVE+ Y
Sbjct: 280 TFPVEMRY 287
Score = 133 (51.9 bits), Expect = 8.6e-12, Sum P(2) = 8.6e-12
Identities = 33/122 (27%), Positives = 59/122 (48%)
Query: 12 MAEFPLEPNLSKMLIMSVHLQCSDEVLTIVSMLSVQNVFYRPXXXXXXXXXXXXXFNQME 71
+A+FP++P L+KM++ S+ C +++L IVS LS+Q+ RP F
Sbjct: 537 LAKFPIDPRLAKMVVSSIEFGCIEQILIIVSALSIQDPRERPHEKQQLSDEKHNRFKDKS 596
Query: 72 GDHITLLAVY---NSWRNNKFSNAW---CYENFVQIRTLKRAQDVRKQLLGIMDRHKLDV 125
D I+LL ++ N + + N + C F+ L+ QD+ QL + ++ +
Sbjct: 597 SDFISLLNLWQYINEQKKDLTQNQFRKLCQREFLSYVRLREWQDIFSQLKLTLKEQQITL 656
Query: 126 VS 127
S
Sbjct: 657 TS 658
Score = 130 (50.8 bits), Expect = 2.0e-14, Sum P(2) = 2.0e-14
Identities = 26/59 (44%), Positives = 38/59 (64%)
Query: 494 ILPVYSALPSEMQTRIFEAAPPGSRKVVIATNIAETSLTIDGIFYVVDPFDIEVRQAKY 552
+LP+Y+ L Q +IF+ P R +V+ATN+AETSLT+ GI YV+DP + + Y
Sbjct: 354 VLPLYARLTVSEQNQIFK--PHSGRNIVLATNVAETSLTVPGIKYVIDPGTARISRYSY 410
Score = 117 (46.2 bits), Expect = 4.4e-13, Sum P(2) = 4.4e-13
Identities = 27/86 (31%), Positives = 44/86 (51%)
Query: 356 VQKAVCSGFFRNAAKKDPQEGYRTLVDSQVVYIHPSSALFNRQPEWVIYHELVQTTKEYM 415
V +A+ SG + ++D Y+ +I P SAL + P+W++ ELV+T++ +
Sbjct: 693 VHQALLSGLLSHIGQQDENREYKG-ARGMKFFIFPGSALTKKSPKWLMSAELVETSRLFA 751
Query: 416 REVTSIDPKWLVEFAPAFFK--FSDP 439
R IDP WL A K +S+P
Sbjct: 752 RMNAKIDPLWLEPLAQHLVKRNYSEP 777
Score = 117 (46.2 bits), Expect = 8.6e-12, Sum P(2) = 8.6e-12
Identities = 27/86 (31%), Positives = 44/86 (51%)
Query: 135 VQKAVCSGFFRNAAKKDPQEGYRTLVDSQVVYIHPSSALFNRQPEWVIYHELVQTTKEYM 194
V +A+ SG + ++D Y+ +I P SAL + P+W++ ELV+T++ +
Sbjct: 693 VHQALLSGLLSHIGQQDENREYKG-ARGMKFFIFPGSALTKKSPKWLMSAELVETSRLFA 751
Query: 195 REVTSIDPKWLVEFAPAFFK--FSDP 218
R IDP WL A K +S+P
Sbjct: 752 RMNAKIDPLWLEPLAQHLVKRNYSEP 777
Score = 69 (29.3 bits), Expect = 1.6e-06, Sum P(2) = 1.6e-06
Identities = 23/69 (33%), Positives = 34/69 (49%)
Query: 277 APIFTIPGRTFPVEVLYT------------KEP-ETDYLDASLITVMQIHLREPPGDVLL 323
API + GRTFPVE+ Y + P E D + L V ++ GD+L+
Sbjct: 271 APIIEVSGRTFPVEMRYRPLNDRAVIDDDDQSPQEVDIISGILSAVDELS-DCGNGDILV 329
Query: 324 FLTGKLDVR 332
FL G+ ++R
Sbjct: 330 FLNGEREIR 338
Score = 45 (20.9 bits), Expect = 1.2e-05, Sum P(2) = 1.2e-05
Identities = 20/59 (33%), Positives = 27/59 (45%)
Query: 367 NAAKKD-PQEGYRTLVDSQVV-YIHPSSALFNRQPEWV-IYHELVQTTKEYMREVTSID 422
N KKD Q +R L + + Y+ R EW I+ +L T KE +TSID
Sbjct: 610 NEQKKDLTQNQFRKLCQREFLSYV--------RLREWQDIFSQLKLTLKEQQITLTSID 660
>RGD|1308767 [details] [associations]
symbol:Dhx36 "DEAH (Asp-Glu-Ala-His) box polypeptide 36"
species:10116 "Rattus norvegicus" [GO:0003725 "double-stranded RNA
binding" evidence=IEA;ISO] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA;ISO] [GO:0005737 "cytoplasm"
evidence=IEA;ISO] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0009615 "response to virus" evidence=IEA;ISO]
[GO:0043330 "response to exogenous dsRNA" evidence=IEA;ISO]
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408
PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
RGD:1308767 GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GO:GO:0009615
GO:GO:0003725 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026 GO:GO:0043330
GeneTree:ENSGT00550000074257 CTD:170506 KO:K14442 OMA:RIRNRSY
OrthoDB:EOG4K6G3J EMBL:CH474003 IPI:IPI00367998
RefSeq:NP_001101148.1 UniGene:Rn.2744 Ensembl:ENSRNOT00000019824
GeneID:310461 KEGG:rno:310461 UCSC:RGD:1308767 NextBio:662035
Uniprot:D4A2Z8
Length = 1000
Score = 161 (61.7 bits), Expect = 2.2e-14, Sum P(4) = 2.2e-14
Identities = 28/49 (57%), Positives = 41/49 (83%)
Query: 493 IILPVYSALPSEMQTRIFEAAPPGSRKVVIATNIAETSLTIDGIFYVVD 541
+I+P++S +P+ QT++F+ PPG RK+VIATNIAETS+TID + YV+D
Sbjct: 512 LIIPLHSLMPTVNQTQVFKKTPPGVRKIVIATNIAETSITIDDVVYVID 560
Score = 143 (55.4 bits), Expect = 1.2e-08, Sum P(2) = 1.2e-08
Identities = 41/160 (25%), Positives = 73/160 (45%)
Query: 6 VTPIS-QMAEFPLEPNLSKMLIMSVHLQCSDEVLTIVSMLSVQNVFYRPXXXXXXXXXXX 64
+TP+ +A P+EP++ KM++ C D VLTI + LS ++ F P
Sbjct: 678 LTPLGVHLARLPVEPHIGKMILFGALFCCLDPVLTIAASLSFKDPFVIPLGKEKIADARR 737
Query: 65 XXF-NQMEGDHITLLAVYNSW-----RNNKFSNAWCYENFVQIRTLKRAQDVRKQ----L 114
+ DH+T++ + W R ++ +C+E F+ TL+ +++ Q L
Sbjct: 738 KELAKETRSDHLTVVNAFEGWEEAKRRGFRYEKDYCWEYFLSSNTLQMLHNMKGQFAEHL 797
Query: 115 LG---IMDRHKLDV-VSAGKNTVRVQKAV-CSGFFRNAAK 149
LG + R D + + ++ KAV C+G + AK
Sbjct: 798 LGAGFVSSRSPKDPKANINSDNEKIIKAVICAGLYPKVAK 837
Score = 110 (43.8 bits), Expect = 2.2e-14, Sum P(4) = 2.2e-14
Identities = 25/52 (48%), Positives = 34/52 (65%)
Query: 245 LLKQAVKKRPEIKLIVTSATLDAVKFSSYFFEAPIFTIPGRTFPVEVLYTKE 296
++K + R ++K+I+ SATL+A KFS YF P+ IPG TFPV V Y E
Sbjct: 341 VIKDLLHFRSDLKVILMSATLNAEKFSEYFGNCPMIHIPGFTFPV-VEYLLE 391
Score = 73 (30.8 bits), Expect = 1.2e-08, Sum P(2) = 1.2e-08
Identities = 22/83 (26%), Positives = 38/83 (45%)
Query: 135 VQKAVCSGFFRNAAKKDPQEGY-RTLV-----DSQVVYIHPSSALFNRQP---EWVIYHE 185
++ +C+G + AK G R +V +V IHP S + W+IYH
Sbjct: 823 IKAVICAGLYPKVAKIRLNLGKKRKMVKVHTKSDGLVSIHPKSVNVEQTDFHYNWLIYHL 882
Query: 186 LVQTTKEYMREVTSIDPKWLVEF 208
++T+ Y+ + T + P L+ F
Sbjct: 883 KMRTSSIYLYDCTEVSPYCLLFF 905
Score = 73 (30.8 bits), Expect = 1.2e-08, Sum P(2) = 1.2e-08
Identities = 22/83 (26%), Positives = 38/83 (45%)
Query: 356 VQKAVCSGFFRNAAKKDPQEGY-RTLV-----DSQVVYIHPSSALFNRQP---EWVIYHE 406
++ +C+G + AK G R +V +V IHP S + W+IYH
Sbjct: 823 IKAVICAGLYPKVAKIRLNLGKKRKMVKVHTKSDGLVSIHPKSVNVEQTDFHYNWLIYHL 882
Query: 407 LVQTTKEYMREVTSIDPKWLVEF 429
++T+ Y+ + T + P L+ F
Sbjct: 883 KMRTSSIYLYDCTEVSPYCLLFF 905
Score = 45 (20.9 bits), Expect = 2.2e-14, Sum P(4) = 2.2e-14
Identities = 12/32 (37%), Positives = 18/32 (56%)
Query: 298 ETDYLDASLITVM--QIHLREPPGDVLLFLTG 327
+ D +D +LI + I L E G +L+FL G
Sbjct: 458 DDDKVDLNLIAALIRYIVLEEEDGAILVFLPG 489
Score = 42 (19.8 bits), Expect = 2.1e-07, Sum P(2) = 2.1e-07
Identities = 18/70 (25%), Positives = 33/70 (47%)
Query: 291 VLYTKEPETDYLDASLITVMQIHLREPPGDVLLFLTGKLD---VRKQLLGIMDRHKLDVV 347
+L EP LD L+ +Q +P + KL ++K+L+ +++ H++ V+
Sbjct: 162 LLQQNEPNLG-LDQQLLEDLQKKKTDPRYIEMQRFRKKLPSYGMQKELVNLINNHQVTVI 220
Query: 348 SA----GKNT 353
S GK T
Sbjct: 221 SGETGCGKTT 230
Score = 39 (18.8 bits), Expect = 2.2e-14, Sum P(4) = 2.2e-14
Identities = 8/27 (29%), Positives = 18/27 (66%)
Query: 110 VRKQLLGIMDRHKLDVVSA----GKNT 132
++K+L+ +++ H++ V+S GK T
Sbjct: 204 MQKELVNLINNHQVTVISGETGCGKTT 230
>TAIR|locus:2039280 [details] [associations]
symbol:AT2G35920 species:3702 "Arabidopsis thaliana"
[GO:0003676 "nucleic acid binding" evidence=IEA;ISS] [GO:0004386
"helicase activity" evidence=IEA;ISS] [GO:0005524 "ATP binding"
evidence=IEA;ISS] [GO:0005737 "cytoplasm" evidence=ISM] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0006499
"N-terminal protein myristoylation" evidence=RCA]
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408
PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
GO:GO:0005524 EMBL:CP002685 GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 KO:K14442 OMA:RIRNRSY IPI:IPI00520060
RefSeq:NP_850255.1 UniGene:At.27892 ProteinModelPortal:F4ILR7
SMR:F4ILR7 PRIDE:F4ILR7 EnsemblPlants:AT2G35920.1 GeneID:818165
KEGG:ath:AT2G35920 Uniprot:F4ILR7
Length = 995
Score = 201 (75.8 bits), Expect = 2.2e-12, P = 2.2e-12
Identities = 63/221 (28%), Positives = 106/221 (47%)
Query: 6 VTPISQ-MAEFPLEPNLSKMLIMSVHLQCSDEVLTIVSMLSVQNVFYRPXXXXXXXXXXX 64
+TP+ + + P++PN+ KML++ QC + LTI + L+ ++ F P
Sbjct: 702 LTPLGRHLCTLPVDPNIGKMLLIGAIFQCVNPALTIAAALAYRSPFVLPLNRKEEADEAK 761
Query: 65 XXF-NQMEGDHITLLAVYNSWRNNKFSNA---WCYENFVQIRTLKRAQDVRKQLL----- 115
F DHI LL Y +R+ K +C++NF+ TL+ +D+R Q L
Sbjct: 762 RYFAGDSCSDHIALLKAYEGYRDAKRGGNEKDFCWQNFLSPVTLRMMEDMRNQFLDLLSD 821
Query: 116 -GIMDRHKLDVVSAGKNTVRVQKAV-CSGFFRNAAKKDPQEGYRTLVDSQV---VYIHPS 170
G +D+ K + + + + AV C+G + N + + G RT ++ V IHP
Sbjct: 822 IGFVDKSKPNAYNQYSYDMEMISAVLCAGLYPNVVQCK-RRGKRTAFYTKELGKVDIHPG 880
Query: 171 S--ALFNR-QPEWVIYHELVQTTKEYMREVTSIDPKWLVEF 208
S A N +++Y E V+TT Y+R+ T+I L+ F
Sbjct: 881 SVNARVNLFSLPYLVYSEKVKTTSVYIRDSTNISDYALLMF 921
Score = 150 (57.9 bits), Expect = 3.1e-14, Sum P(3) = 3.1e-14
Identities = 28/57 (49%), Positives = 42/57 (73%)
Query: 485 LGPDVPELIILPVYSALPSEMQTRIFEAAPPGSRKVVIATNIAETSLTIDGIFYVVD 541
LG D + ++LP++ ++P+ Q IF+ PP RK+V+ATNIAE+S+TID + YVVD
Sbjct: 529 LG-DSSKFLVLPLHGSMPTVNQREIFDRPPPNKRKIVLATNIAESSITIDDVVYVVD 584
Score = 119 (46.9 bits), Expect = 3.1e-14, Sum P(3) = 3.1e-14
Identities = 22/52 (42%), Positives = 37/52 (71%)
Query: 245 LLKQAVKKRPEIKLIVTSATLDAVKFSSYFFEAPIFTIPGRTFPVEVLYTKE 296
+L+ + +RP+++LI+ SAT++A FS+YF +P IPG TFPV L+ ++
Sbjct: 367 ILRDLLPRRPDLRLILMSATINADMFSTYFGNSPTMHIPGFTFPVAELFLED 418
Score = 77 (32.2 bits), Expect = 1.1e-06, Sum P(3) = 1.1e-06
Identities = 30/103 (29%), Positives = 52/103 (50%)
Query: 336 LGIMDRHKLDVVSAGKNTVRVQKAV-CSGFFRNAAKKDPQEGYRTLVDSQV---VYIHPS 391
+G +D+ K + + + + AV C+G + N + + G RT ++ V IHP
Sbjct: 822 IGFVDKSKPNAYNQYSYDMEMISAVLCAGLYPNVVQCK-RRGKRTAFYTKELGKVDIHPG 880
Query: 392 SA-----LFNRQPEWVIYHELVQTTKEYMREVTSIDPKWLVEF 429
S LF+ P +++Y E V+TT Y+R+ T+I L+ F
Sbjct: 881 SVNARVNLFSL-P-YLVYSEKVKTTSVYIRDSTNISDYALLMF 921
Score = 45 (20.9 bits), Expect = 3.1e-14, Sum P(3) = 3.1e-14
Identities = 13/36 (36%), Positives = 20/36 (55%)
Query: 302 LDASLI--TVMQIHLREPPGDVLLFLTGKLDVRKQL 335
+D L+ T+ I E G +L+FLTG ++ K L
Sbjct: 485 IDVDLVEATIEHICRLEGGGAILVFLTGWDEISKLL 520
>UNIPROTKB|Q6P158 [details] [associations]
symbol:DHX57 "Putative ATP-dependent RNA helicase DHX57"
species:9606 "Homo sapiens" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] InterPro:IPR000571
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR006575
InterPro:IPR007502 InterPro:IPR009060 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF00642 Pfam:PF04408 Pfam:PF05773
PROSITE:PS00690 PROSITE:PS50103 PROSITE:PS51194 SMART:SM00356
SMART:SM00490 SMART:SM00847 GO:GO:0005524 GO:GO:0046872
GO:GO:0008270 GO:GO:0003676 InterPro:IPR015940 PROSITE:PS50030
EMBL:AC018693 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
SUPFAM:SSF46934 eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 EMBL:AK057423 EMBL:BC053623 EMBL:BC060778
EMBL:BC065278 EMBL:BC131534 EMBL:AF283512 IPI:IPI00168885
IPI:IPI00399364 IPI:IPI00749029 RefSeq:NP_945314.1
UniGene:Hs.468226 ProteinModelPortal:Q6P158 SMR:Q6P158
IntAct:Q6P158 STRING:Q6P158 PhosphoSite:Q6P158 DMDM:94710252
PaxDb:Q6P158 PeptideAtlas:Q6P158 PRIDE:Q6P158
Ensembl:ENST00000295373 GeneID:90957 KEGG:hsa:90957 UCSC:uc002rre.3
UCSC:uc002rrg.3 CTD:90957 GeneCards:GC02M039025 HGNC:HGNC:20086
HPA:HPA036160 neXtProt:NX_Q6P158 PharmGKB:PA134919698
HOVERGEN:HBG080658 InParanoid:Q6P158 KO:K13026 OMA:RAYKGWQ
OrthoDB:EOG4ZS929 PhylomeDB:Q6P158 ChiTaRS:DHX57 GenomeRNAi:90957
NextBio:77048 ArrayExpress:Q6P158 Bgee:Q6P158 CleanEx:HS_DHX57
Genevestigator:Q6P158 GermOnline:ENSG00000163214 Uniprot:Q6P158
Length = 1386
Score = 140 (54.3 bits), Expect = 3.8e-14, Sum P(4) = 3.8e-14
Identities = 28/63 (44%), Positives = 41/63 (65%)
Query: 234 QRTNRISFPPGLLKQAVKKRPEIKLIVTSATLDAVKFSSYFFEAPIFTIPGRTFPVEVLY 293
+RT F +LK V +RP +++I+ SATL+A FS YF P+ TIPGRTFPV+ +
Sbjct: 672 ERTEESDFLLLVLKDIVSQRPGLQVILMSATLNAELFSDYFNSCPVITIPGRTFPVDQFF 731
Query: 294 TKE 296
++
Sbjct: 732 LED 734
Score = 133 (51.9 bits), Expect = 3.8e-14, Sum P(4) = 3.8e-14
Identities = 25/49 (51%), Positives = 36/49 (73%)
Query: 493 IILPVYSALPSEMQTRIFEAAPPGSRKVVIATNIAETSLTIDGIFYVVD 541
+I P++S+L SE Q +F P G K++I+TNIAETS+TID + YV+D
Sbjct: 882 VIHPLHSSLSSEEQQAVFVKPPAGVTKIIISTNIAETSITIDDVVYVID 930
Score = 112 (44.5 bits), Expect = 5.7e-05, Sum P(3) = 5.7e-05
Identities = 26/119 (21%), Positives = 54/119 (45%)
Query: 6 VTPIS-QMAEFPLEPNLSKMLIMSVHLQCSDEVLTIVSMLSVQNVFYRPXXXXXXXXXXX 64
+TP+ +A P++ + K+++ +C D LTI + L+ ++ F P
Sbjct: 1052 LTPLGYHLASLPVDVRIGKLMLFGSIFRCLDPALTIAASLAFKSPFVSPWDKKEEANQKK 1111
Query: 65 XXFNQMEGDHITLLAVYNSWRNN-----KFSNAWCYENFVQIRTLKRAQDVRKQLLGIM 118
F D++ LL Y W+ + + S +C +NF+ R L+ +++Q ++
Sbjct: 1112 LEFAFANSDYLALLQAYKGWQLSTKEGVRASYNYCRQNFLSGRVLQEMASLKRQFTELL 1170
Score = 65 (27.9 bits), Expect = 2.7e-08, Sum P(5) = 2.7e-08
Identities = 14/47 (29%), Positives = 29/47 (61%)
Query: 386 VYIHPSSALFNRQ---PEWVIYHELVQTTKEYMREVTSIDPKWLVEF 429
V+IHPSS + + +++YHE ++T++ ++R+ + + LV F
Sbjct: 1262 VHIHPSSVNYQVRHFDSPYLLYHEKIKTSRVFIRDCSMVSVYPLVLF 1308
Score = 65 (27.9 bits), Expect = 5.7e-05, Sum P(3) = 5.7e-05
Identities = 14/47 (29%), Positives = 29/47 (61%)
Query: 165 VYIHPSSALFNRQ---PEWVIYHELVQTTKEYMREVTSIDPKWLVEF 208
V+IHPSS + + +++YHE ++T++ ++R+ + + LV F
Sbjct: 1262 VHIHPSSVNYQVRHFDSPYLLYHEKIKTSRVFIRDCSMVSVYPLVLF 1308
Score = 52 (23.4 bits), Expect = 5.7e-05, Sum P(3) = 5.7e-05
Identities = 15/70 (21%), Positives = 30/70 (42%)
Query: 106 RAQDVRKQLLG---IMDRHKLDVVSAGKNTVRVQKAVCSGFFRNAAKKDPQEGYRTLVDS 162
RA+++ K+ G ++D + S +N + +C+ + N + EG +
Sbjct: 1181 RAREIEKRAQGGDGVLDATGEEANSNAENPKLISAMLCAALYPNVVQVKSPEGKFQKTST 1240
Query: 163 QVVYIHPSSA 172
V + P SA
Sbjct: 1241 GAVRMQPKSA 1250
Score = 47 (21.6 bits), Expect = 2.7e-08, Sum P(5) = 2.7e-08
Identities = 12/57 (21%), Positives = 23/57 (40%)
Query: 337 GIMDRHKLDVVSAGKNTVRVQKAVCSGFFRNAAKKDPQEGYRTLVDSQVVYIHPSSA 393
G++D + S +N + +C+ + N + EG + V + P SA
Sbjct: 1194 GVLDATGEEANSNAENPKLISAMLCAALYPNVVQVKSPEGKFQKTSTGAVRMQPKSA 1250
Score = 45 (20.9 bits), Expect = 3.8e-14, Sum P(4) = 3.8e-14
Identities = 7/16 (43%), Positives = 12/16 (75%)
Query: 317 PPGDVLLFLTGKLDVR 332
PPG +L+FL G +++
Sbjct: 846 PPGAILVFLPGLAEIK 861
Score = 43 (20.2 bits), Expect = 3.8e-14, Sum P(4) = 3.8e-14
Identities = 11/42 (26%), Positives = 24/42 (57%)
Query: 95 YENFVQIRTLKRAQDVRKQLLGIMDRHKLDVVSA----GKNT 132
+++ +Q R A + R+ +L ++ +H++ V+S GK T
Sbjct: 534 FQSILQERQSLPAWEERETILNLLRKHQVVVISGMTGCGKTT 575
>TAIR|locus:2125211 [details] [associations]
symbol:AT4G01020 species:3702 "Arabidopsis thaliana"
[GO:0003676 "nucleic acid binding" evidence=IEA;ISS] [GO:0003723
"RNA binding" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA;ISS] [GO:0005524 "ATP binding" evidence=IEA;ISS]
[GO:0005622 "intracellular" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0008270 "zinc
ion binding" evidence=IEA] InterPro:IPR001841 InterPro:IPR018957
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR002867
InterPro:IPR004087 InterPro:IPR007087 InterPro:IPR007502
InterPro:IPR011545 InterPro:IPR015880 Pfam:PF00270 Pfam:PF00271
Pfam:PF01485 Pfam:PF04408 PROSITE:PS00028 PROSITE:PS00690
PROSITE:PS50089 PROSITE:PS50157 PROSITE:PS51194 SMART:SM00184
SMART:SM00322 SMART:SM00355 SMART:SM00490 SMART:SM00647
SMART:SM00847 Pfam:PF00097 Prosite:PS00518 GO:GO:0005524
GO:GO:0009507 EMBL:CP002687 GenomeReviews:CT486007_GR GO:GO:0046872
GO:GO:0008270 GO:GO:0003723 Gene3D:3.30.40.10 InterPro:IPR013083
InterPro:IPR017907 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR011709 Pfam:PF07717 HSSP:P38398 GO:GO:0008026
EMBL:AL161491 EMBL:AL080237 KO:K12818 PIR:T10542 IPI:IPI00547897
RefSeq:NP_567206.1 UniGene:At.42970 ProteinModelPortal:P0CE10
SMR:P0CE10 PRIDE:P0CE10 EnsemblPlants:AT4G01020.1 GeneID:826439
KEGG:ath:AT4G01020 GeneFarm:1806 TAIR:At4g01020
HOGENOM:HOG000084497 PhylomeDB:P0CE10 Uniprot:P0CE10
Length = 1787
Score = 180 (68.4 bits), Expect = 8.7e-10, P = 8.7e-10
Identities = 54/209 (25%), Positives = 96/209 (45%)
Query: 12 MAEFPLEPNLSKMLIMSVHLQCSDEVLTIVS-MLSVQNVFYRPXXXXXXXXXXXXX--FN 68
+ + LEP L K+++ + E + + + M + ++F R F
Sbjct: 720 LVKLGLEPKLGKLILGCFRHRMGKEGIVLAAVMANASSIFCRVGNFDDKMKADRLKVQFC 779
Query: 69 QMEGDHITLLAVYNSWRN--NKFSNAWCYENFVQIRTLKRAQDVRKQLLGIMDRHKLDVV 126
GD TLL+VY W + N WC+EN + ++++R +D K+L ++R +L +V
Sbjct: 780 NDNGDLFTLLSVYKEWASLPRDRRNKWCWENSLNAKSMRRCEDTVKELEICIER-ELTLV 838
Query: 127 SAG----------KNTVRVQKAVCSGFFRNAAKKD--PQEGYRTLVDSQVVYIHPSSAL- 173
S K+ ++ + + N A Q GY + SQ V +HPS +L
Sbjct: 839 SPSYWVWNPNEGTKHDKYLKMVILASLAENVAMYTGYDQLGYEVALTSQQVQLHPSCSLL 898
Query: 174 -FNRQPEWVIYHELVQTTKEYMREVTSID 201
F ++P WV++ EL+ +Y+ VT+ D
Sbjct: 899 AFGQKPSWVVFGELLSIVDQYLVCVTAFD 927
Score = 138 (53.6 bits), Expect = 4.8e-14, Sum P(2) = 4.8e-14
Identities = 38/90 (42%), Positives = 53/90 (58%)
Query: 463 AWRISREEIDTACEILYERMKSLGPDVPELIILPVYSALPSEMQTRIFEAAPPGSRKVVI 522
A+ S+ E++ ACE R + P I LP++ L E Q +F+ P G RKV+
Sbjct: 526 AFLTSQAEVEWACE----RFVA-----PSAIALPLHGKLSFEEQFMVFQNYP-GRRKVIF 575
Query: 523 ATNIAETSLTIDGIFYVVDPFDIEVRQAKY 552
ATNIAETSLTI G+ YV+D V+++KY
Sbjct: 576 ATNIAETSLTIPGVKYVIDSG--MVKESKY 603
Score = 136 (52.9 bits), Expect = 4.8e-14, Sum P(2) = 4.8e-14
Identities = 32/96 (33%), Positives = 53/96 (55%)
Query: 245 LLKQAVKKRPEIKLIVTSATLDAVKFSSYFFEAPIFTIPGRTFPVEVLY----TKEPET- 299
LL++ + +R +++L++ SAT DA + S Y F+ I + GR FPVE++Y T+E
Sbjct: 439 LLRKLLSRRIDLRLVIMSATADANQLSQYLFDCGILHVNGRNFPVEIVYSPSGTEENSVV 498
Query: 300 ----DYLDASLITVMQIHLREPPGDVLLFLTGKLDV 331
Y + ++IH E G +L FLT + +V
Sbjct: 499 GRIASYAGDVVKMAVEIHKTEKEGTILAFLTSQAEV 534
Score = 100 (40.3 bits), Expect = 4.2e-10, Sum P(2) = 4.2e-10
Identities = 20/51 (39%), Positives = 31/51 (60%)
Query: 374 QEGYRTLVDSQVVYIHPSSAL--FNRQPEWVIYHELVQTTKEYMREVTSID 422
Q GY + SQ V +HPS +L F ++P WV++ EL+ +Y+ VT+ D
Sbjct: 877 QLGYEVALTSQQVQLHPSCSLLAFGQKPSWVVFGELLSIVDQYLVCVTAFD 927
>UNIPROTKB|E1C9G0 [details] [associations]
symbol:DHX57 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] InterPro:IPR000571 InterPro:IPR001650
InterPro:IPR006575 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF00642 Pfam:PF04408 Pfam:PF05773
PROSITE:PS50103 PROSITE:PS51194 SMART:SM00356 SMART:SM00490
SMART:SM00847 GO:GO:0005524 GO:GO:0008270 GO:GO:0003676
InterPro:IPR015940 SMART:SM00165 PROSITE:PS50030 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 GeneTree:ENSGT00550000074257 OMA:RAYKGWQ
EMBL:AADN02041257 EMBL:AADN02041258 EMBL:AADN02041259
EMBL:AADN02041260 IPI:IPI00679513 Ensembl:ENSGALT00000023376
Uniprot:E1C9G0
Length = 1380
Score = 139 (54.0 bits), Expect = 5.6e-14, Sum P(3) = 5.6e-14
Identities = 27/63 (42%), Positives = 41/63 (65%)
Query: 234 QRTNRISFPPGLLKQAVKKRPEIKLIVTSATLDAVKFSSYFFEAPIFTIPGRTFPVEVLY 293
+RT F +LK + +RP++++I+ SATL+A FS YF PI IPGRTFPV+ +
Sbjct: 665 ERTEESDFLLLVLKDIMVQRPDLRIILMSATLNAELFSQYFHSCPIINIPGRTFPVDQFF 724
Query: 294 TKE 296
++
Sbjct: 725 LED 727
Score = 131 (51.2 bits), Expect = 5.6e-14, Sum P(3) = 5.6e-14
Identities = 28/70 (40%), Positives = 45/70 (64%)
Query: 476 EILYERMKSLG----PDVPELIILPVYSALPSEMQTRIFEAAPPGSRKVVIATNIAETSL 531
++LYE+++S ++ P++S+L SE Q +F P G K++I+TNIAETS+
Sbjct: 854 KMLYEQLQSNALFNNRHSKRCVVYPLHSSLSSEEQQSVFLRPPAGVIKIIISTNIAETSV 913
Query: 532 TIDGIFYVVD 541
TID + YV+D
Sbjct: 914 TIDDVVYVID 923
Score = 122 (48.0 bits), Expect = 1.8e-05, Sum P(2) = 1.8e-05
Identities = 28/119 (23%), Positives = 54/119 (45%)
Query: 6 VTPIS-QMAEFPLEPNLSKMLIMSVHLQCSDEVLTIVSMLSVQNVFYRPXXXXXXXXXXX 64
+TP+ +A P++ + K+++ +C D LTI + L+ ++ F P
Sbjct: 1045 LTPLGYHLASLPVDVRIGKLMLFGTIFRCLDPALTIAASLAFKSPFVSPWDKREEANKKK 1104
Query: 65 XXFNQMEGDHITLLAVYNSWR-----NNKFSNAWCYENFVQIRTLKRAQDVRKQLLGIM 118
F D++ LL Y WR ++ S +C ENF+ R L+ +++Q ++
Sbjct: 1105 LDFAVGNSDYLALLQAYKGWRLSTKEGSQASYNYCRENFLSGRVLQEIASLKRQFTELL 1163
Score = 67 (28.6 bits), Expect = 1.6e-07, Sum P(3) = 1.6e-07
Identities = 20/79 (25%), Positives = 43/79 (54%)
Query: 352 NTVRVQKAVCSGFFRN----AAKKDPQ-EGYRTLVDSQ-VVYIHPSSALFNR---QPEWV 402
N V+V+K G ++ A K P+ E + + + V+IHPSS + + ++
Sbjct: 1218 NVVQVKKP--EGKYQKTSTGAVKMQPKAEELKFVTKNDGYVHIHPSSVNYQTRHFESPYL 1275
Query: 403 IYHELVQTTKEYMREVTSI 421
+YHE ++T++ ++R+ + +
Sbjct: 1276 VYHEKIKTSRVFIRDCSMV 1294
Score = 67 (28.6 bits), Expect = 1.8e-05, Sum P(2) = 1.8e-05
Identities = 20/79 (25%), Positives = 43/79 (54%)
Query: 131 NTVRVQKAVCSGFFRN----AAKKDPQ-EGYRTLVDSQ-VVYIHPSSALFNR---QPEWV 181
N V+V+K G ++ A K P+ E + + + V+IHPSS + + ++
Sbjct: 1218 NVVQVKKP--EGKYQKTSTGAVKMQPKAEELKFVTKNDGYVHIHPSSVNYQTRHFESPYL 1275
Query: 182 IYHELVQTTKEYMREVTSI 200
+YHE ++T++ ++R+ + +
Sbjct: 1276 VYHEKIKTSRVFIRDCSMV 1294
Score = 47 (21.6 bits), Expect = 5.6e-14, Sum P(3) = 5.6e-14
Identities = 8/16 (50%), Positives = 12/16 (75%)
Query: 317 PPGDVLLFLTGKLDVR 332
PPG VL+FL G +++
Sbjct: 839 PPGAVLIFLPGLAEIK 854
Score = 40 (19.1 bits), Expect = 7.8e-05, Sum P(3) = 7.8e-05
Identities = 10/56 (17%), Positives = 22/56 (39%)
Query: 337 GIMDRHKLDVVSAGKNTVRVQKAVCSGFFRNAAKKDPQEGYRTLVDSQVVYIHPSS 392
G++D + S +N + +C+ + N + EG + V + P +
Sbjct: 1188 GVLDATGEEANSNAENFKLISAMLCAALYPNVVQVKKPEGKYQKTSTGAVKMQPKA 1243
>UNIPROTKB|E1BNQ2 [details] [associations]
symbol:DHX37 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0003676
"nucleic acid binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR003593 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS51194
SMART:SM00382 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
GeneTree:ENSGT00550000074985 KO:K14780 CTD:57647 EMBL:DAAA02045204
IPI:IPI00698261 RefSeq:NP_001192890.1 UniGene:Bt.8113 PRIDE:E1BNQ2
Ensembl:ENSBTAT00000027206 GeneID:529207 KEGG:bta:529207
OMA:ANCRDAL NextBio:20874985 Uniprot:E1BNQ2
Length = 1155
Score = 158 (60.7 bits), Expect = 5.8e-14, Sum P(3) = 5.8e-14
Identities = 27/66 (40%), Positives = 44/66 (66%)
Query: 374 QEGYRTLVDSQVVYIHPSSALFNRQPEWVIYHELVQTTKEYMREVTSIDPKWLVEFAPAF 433
+ Y+T + V+IHPSS LF PE+V+Y E+V+TTK YM+ V+++D +W+ P++
Sbjct: 950 KNAYKTPLLDDPVFIHPSSVLFKELPEFVVYQEIVETTKMYMKGVSTVDMQWIPVLLPSY 1009
Query: 434 FKFSDP 439
+F P
Sbjct: 1010 CQFDKP 1015
Score = 158 (60.7 bits), Expect = 2.6e-10, Sum P(2) = 2.6e-10
Identities = 27/66 (40%), Positives = 44/66 (66%)
Query: 153 QEGYRTLVDSQVVYIHPSSALFNRQPEWVIYHELVQTTKEYMREVTSIDPKWLVEFAPAF 212
+ Y+T + V+IHPSS LF PE+V+Y E+V+TTK YM+ V+++D +W+ P++
Sbjct: 950 KNAYKTPLLDDPVFIHPSSVLFKELPEFVVYQEIVETTKMYMKGVSTVDMQWIPVLLPSY 1009
Query: 213 FKFSDP 218
+F P
Sbjct: 1010 CQFDKP 1015
Score = 147 (56.8 bits), Expect = 9.0e-13, Sum P(3) = 9.0e-13
Identities = 31/56 (55%), Positives = 39/56 (69%)
Query: 487 PDVP-ELIILPVYSALPSEMQTRIFEAAPPGSRKVVIATNIAETSLTIDGIFYVVD 541
PD L +LP+YS L E Q ++F+ P G+R V+ATN+AETSLTI GI YVVD
Sbjct: 580 PDASLPLHVLPLYSLLAPEKQAQVFQPPPEGTRLCVVATNVAETSLTIPGIKYVVD 635
Score = 116 (45.9 bits), Expect = 5.8e-14, Sum P(3) = 5.8e-14
Identities = 34/97 (35%), Positives = 49/97 (50%)
Query: 244 GLLKQAV----KKRPEIKLIVTSATLDAVKFSS---YFFEAP-IFTIPGRTFPVEVLYTK 295
GLL + V K+ +KL++ SATL F+ F + P + + R FPV V + K
Sbjct: 384 GLLSRIVCLREKRHLPLKLLIMSATLRVEDFTQNQRLFTQPPPVIKVESRQFPVTVHFNK 443
Query: 296 E-PETDYLDASLITVMQIHLREPPGDVLLFLTGKLDV 331
P DY V +IH P G +L+FLTG+ +V
Sbjct: 444 RTPLEDYSGECFRKVCKIHRMLPAGGILVFLTGQAEV 480
Score = 75 (31.5 bits), Expect = 2.6e-10, Sum P(2) = 2.6e-10
Identities = 17/49 (34%), Positives = 29/49 (59%)
Query: 3 SLVVTPISQ-MAEFPLEPNLSKMLIMSVHLQCSDEVLTIVSMLSVQNVF 50
S +T + + MA FP+ P +KML +S C +TIV+ ++V+ +F
Sbjct: 763 SCPITELGRTMATFPVAPRYAKMLALSRQHGCLPYTITIVAAMTVRELF 811
Score = 39 (18.8 bits), Expect = 5.8e-14, Sum P(3) = 5.8e-14
Identities = 8/17 (47%), Positives = 12/17 (70%)
Query: 223 KFKKNQRLEPLQRTNRI 239
K KK+QR E LQ+ + +
Sbjct: 87 KKKKSQRAEMLQKLSEV 103
>UNIPROTKB|F1RFN6 [details] [associations]
symbol:DHX37 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005524 "ATP binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] InterPro:IPR007502 Pfam:PF04408
SMART:SM00847 GO:GO:0005524 GO:GO:0004386 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717
GeneTree:ENSGT00550000074985 OMA:AKLQPRT EMBL:CU468581
Ensembl:ENSSSCT00000010698 Uniprot:F1RFN6
Length = 1158
Score = 152 (58.6 bits), Expect = 6.5e-14, Sum P(2) = 6.5e-14
Identities = 25/63 (39%), Positives = 44/63 (69%)
Query: 377 YRTLVDSQVVYIHPSSALFNRQPEWVIYHELVQTTKEYMREVTSIDPKWLVEFAPAFFKF 436
Y+T + + V+IHPSS LF P++V+Y E+V+TTK YM+ V++++ +W+ P++ +F
Sbjct: 957 YKTPLLDEPVFIHPSSVLFKELPDFVVYQEIVETTKMYMKGVSTVEVQWIPVLLPSYCQF 1016
Query: 437 SDP 439
P
Sbjct: 1017 DKP 1019
Score = 152 (58.6 bits), Expect = 1.4e-09, Sum P(2) = 1.4e-09
Identities = 25/63 (39%), Positives = 44/63 (69%)
Query: 156 YRTLVDSQVVYIHPSSALFNRQPEWVIYHELVQTTKEYMREVTSIDPKWLVEFAPAFFKF 215
Y+T + + V+IHPSS LF P++V+Y E+V+TTK YM+ V++++ +W+ P++ +F
Sbjct: 957 YKTPLLDEPVFIHPSSVLFKELPDFVVYQEIVETTKMYMKGVSTVEVQWIPVLLPSYCQF 1016
Query: 216 SDP 218
P
Sbjct: 1017 DKP 1019
Score = 116 (45.9 bits), Expect = 6.5e-14, Sum P(2) = 6.5e-14
Identities = 34/97 (35%), Positives = 49/97 (50%)
Query: 244 GLLKQAV----KKRPEIKLIVTSATLDAVKFSS---YFFEAP-IFTIPGRTFPVEVLYTK 295
GLL + V K+ +KL++ SATL F+ F + P + + R FPV V + K
Sbjct: 399 GLLSRIVCLRAKRHLPLKLLIMSATLRVEDFTQNQRLFAQPPPVIKVESRQFPVTVHFNK 458
Query: 296 E-PETDYLDASLITVMQIHLREPPGDVLLFLTGKLDV 331
P DY V +IH P G +L+FLTG+ +V
Sbjct: 459 RTPLEDYSGECFRKVCKIHRMLPAGGILVFLTGQAEV 495
Score = 74 (31.1 bits), Expect = 1.4e-09, Sum P(2) = 1.4e-09
Identities = 17/49 (34%), Positives = 29/49 (59%)
Query: 3 SLVVTPISQ-MAEFPLEPNLSKMLIMSVHLQCSDEVLTIVSMLSVQNVF 50
S +T + + MA FP+ P +KML +S C +TIV+ ++V+ +F
Sbjct: 765 SCPITVLGRTMATFPVAPRYAKMLALSRQHGCLPYAITIVAAMTVRELF 813
>UNIPROTKB|Q8IY37 [details] [associations]
symbol:DHX37 "Probable ATP-dependent RNA helicase DHX37"
species:9606 "Homo sapiens" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR001650 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
HOGENOM:HOG000201240 KO:K14780 EMBL:BC002575 EMBL:BC037964
EMBL:AB040950 IPI:IPI00217630 RefSeq:NP_116045.2 UniGene:Hs.107382
ProteinModelPortal:Q8IY37 SMR:Q8IY37 IntAct:Q8IY37 STRING:Q8IY37
PhosphoSite:Q8IY37 DMDM:38257651 PaxDb:Q8IY37 PRIDE:Q8IY37
Ensembl:ENST00000308736 GeneID:57647 KEGG:hsa:57647 UCSC:uc001ugy.3
CTD:57647 GeneCards:GC12M125431 HGNC:HGNC:17210 HPA:HPA047607
neXtProt:NX_Q8IY37 PharmGKB:PA27224 HOVERGEN:HBG051356
InParanoid:Q8IY37 OMA:AKLQPRT OrthoDB:EOG4P2Q1J PhylomeDB:Q8IY37
GenomeRNAi:57647 NextBio:64382 ArrayExpress:Q8IY37 Bgee:Q8IY37
CleanEx:HS_DHX37 Genevestigator:Q8IY37 GermOnline:ENSG00000150990
Uniprot:Q8IY37
Length = 1157
Score = 158 (60.7 bits), Expect = 7.3e-14, Sum P(3) = 7.3e-14
Identities = 27/66 (40%), Positives = 44/66 (66%)
Query: 374 QEGYRTLVDSQVVYIHPSSALFNRQPEWVIYHELVQTTKEYMREVTSIDPKWLVEFAPAF 433
+ Y+T + V+IHPSS LF PE+V+Y E+V+TTK YM+ V+S++ +W+ P++
Sbjct: 952 RNAYKTPLLDDPVFIHPSSVLFKELPEFVVYQEIVETTKMYMKGVSSVEVQWIPALLPSY 1011
Query: 434 FKFSDP 439
+F P
Sbjct: 1012 CQFDKP 1017
Score = 158 (60.7 bits), Expect = 2.6e-10, Sum P(2) = 2.6e-10
Identities = 27/66 (40%), Positives = 44/66 (66%)
Query: 153 QEGYRTLVDSQVVYIHPSSALFNRQPEWVIYHELVQTTKEYMREVTSIDPKWLVEFAPAF 212
+ Y+T + V+IHPSS LF PE+V+Y E+V+TTK YM+ V+S++ +W+ P++
Sbjct: 952 RNAYKTPLLDDPVFIHPSSVLFKELPEFVVYQEIVETTKMYMKGVSSVEVQWIPALLPSY 1011
Query: 213 FKFSDP 218
+F P
Sbjct: 1012 CQFDKP 1017
Score = 146 (56.5 bits), Expect = 1.5e-12, Sum P(3) = 1.5e-12
Identities = 31/56 (55%), Positives = 39/56 (69%)
Query: 487 PDVP-ELIILPVYSALPSEMQTRIFEAAPPGSRKVVIATNIAETSLTIDGIFYVVD 541
PD L +LP+YS L E Q ++F+ P G+R V+ATN+AETSLTI GI YVVD
Sbjct: 582 PDASLPLHVLPLYSLLAPEKQAQVFKPPPEGTRLCVVATNVAETSLTIPGIKYVVD 637
Score = 115 (45.5 bits), Expect = 7.3e-14, Sum P(3) = 7.3e-14
Identities = 34/97 (35%), Positives = 49/97 (50%)
Query: 244 GLLKQAV----KKRPEIKLIVTSATLDAVKFSS---YFFEAP-IFTIPGRTFPVEVLYTK 295
GLL + V K+ +KL++ SATL F+ F + P + + R FPV V + K
Sbjct: 386 GLLSRIVTLRAKRNLPLKLLIMSATLRVEDFTQNPRLFAKPPPVIKVESRQFPVTVHFNK 445
Query: 296 E-PETDYLDASLITVMQIHLREPPGDVLLFLTGKLDV 331
P DY V +IH P G +L+FLTG+ +V
Sbjct: 446 RTPLEDYSGECFRKVCKIHRMLPAGGILVFLTGQAEV 482
Score = 75 (31.5 bits), Expect = 2.6e-10, Sum P(2) = 2.6e-10
Identities = 17/49 (34%), Positives = 29/49 (59%)
Query: 3 SLVVTPISQ-MAEFPLEPNLSKMLIMSVHLQCSDEVLTIVSMLSVQNVF 50
S +T + + MA FP+ P +KML +S C +TIV+ ++V+ +F
Sbjct: 765 SCPITALGRTMATFPVAPRYAKMLALSRQHGCLPYAITIVASMTVRELF 813
Score = 39 (18.8 bits), Expect = 7.3e-14, Sum P(3) = 7.3e-14
Identities = 8/17 (47%), Positives = 12/17 (70%)
Query: 223 KFKKNQRLEPLQRTNRI 239
K KK+QR E LQ+ + +
Sbjct: 87 KEKKSQRAEMLQKLSEV 103
>UNIPROTKB|E2QX71 [details] [associations]
symbol:DHX57 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0003676
"nucleic acid binding" evidence=IEA] InterPro:IPR000571
InterPro:IPR001650 InterPro:IPR006575 InterPro:IPR007502
InterPro:IPR009060 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF00642 Pfam:PF04408 Pfam:PF05773 PROSITE:PS50103
PROSITE:PS51194 SMART:SM00356 SMART:SM00490 SMART:SM00847
GO:GO:0005524 GO:GO:0008270 GO:GO:0003676 InterPro:IPR015940
SMART:SM00165 PROSITE:PS50030 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 SUPFAM:SSF46934 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 GeneTree:ENSGT00550000074257 CTD:90957 KO:K13026
OMA:RAYKGWQ EMBL:AAEX03010868 RefSeq:XP_540155.1
Ensembl:ENSCAFT00000010087 GeneID:483040 KEGG:cfa:483040
Uniprot:E2QX71
Length = 1382
Score = 141 (54.7 bits), Expect = 9.2e-14, Sum P(4) = 9.2e-14
Identities = 28/63 (44%), Positives = 41/63 (65%)
Query: 234 QRTNRISFPPGLLKQAVKKRPEIKLIVTSATLDAVKFSSYFFEAPIFTIPGRTFPVEVLY 293
+RT F +LK V +RP +++I+ SATL+A FS YF P+ TIPGRTFPV+ +
Sbjct: 668 ERTEESDFLLLVLKDIVLQRPNLQVILMSATLNAELFSEYFSSCPVITIPGRTFPVDQFF 727
Query: 294 TKE 296
++
Sbjct: 728 LED 730
Score = 131 (51.2 bits), Expect = 9.2e-14, Sum P(4) = 9.2e-14
Identities = 24/49 (48%), Positives = 36/49 (73%)
Query: 493 IILPVYSALPSEMQTRIFEAAPPGSRKVVIATNIAETSLTIDGIFYVVD 541
++ P++S+L SE Q +F P G K++I+TNIAETS+TID + YV+D
Sbjct: 878 VVHPLHSSLSSEEQQAVFVKPPVGVTKIIISTNIAETSITIDDVVYVID 926
Score = 116 (45.9 bits), Expect = 4.9e-05, Sum P(2) = 4.9e-05
Identities = 30/143 (20%), Positives = 61/143 (42%)
Query: 6 VTPIS-QMAEFPLEPNLSKMLIMSVHLQCSDEVLTIVSMLSVQNVFYRPXXXXXXXXXXX 64
+TP+ +A P++ + K+++ +C D LTI + L+ ++ F P
Sbjct: 1048 LTPLGYHLASLPVDVRIGKLMLFGSIFRCLDPALTIAASLAFKSPFVSPWDKKEEANQKK 1107
Query: 65 XXFNQMEGDHITLLAVYNSWRNN-----KFSNAWCYENFVQIRTLKRAQDVRKQLLGIMD 119
F D++ LL Y W+ + + S +C +NF+ R L+ +++Q ++
Sbjct: 1108 LEFAFANSDYLALLRAYKGWQLSMKEGMRASYNYCRQNFLSGRVLQEMASLKRQFTELLS 1167
Query: 120 RHKLDVVSAGKNTVRVQKAVCSG 142
+ V G ++K G
Sbjct: 1168 --DIGFVKEGLRAREIEKRAQGG 1188
Score = 69 (29.3 bits), Expect = 1.2e-07, Sum P(4) = 1.2e-07
Identities = 24/88 (27%), Positives = 44/88 (50%)
Query: 345 DVVSAGKNTVRVQKAVCSGFFRNAAKKDPQEGYRTLVDSQVVYIHPSSALFNRQ---PEW 401
+VV + QK +G R K D + + T D V +IHPSS + + +
Sbjct: 1220 NVVQVKSPEGKFQKT-STGAVRMQPKSDELK-FVTKNDGYV-HIHPSSVNYQVRHFDSPY 1276
Query: 402 VIYHELVQTTKEYMREVTSIDPKWLVEF 429
++YHE ++T++ ++R+ + + LV F
Sbjct: 1277 LVYHEKIKTSRVFIRDCSMVSVYPLVLF 1304
Score = 69 (29.3 bits), Expect = 4.9e-05, Sum P(2) = 4.9e-05
Identities = 24/88 (27%), Positives = 44/88 (50%)
Query: 124 DVVSAGKNTVRVQKAVCSGFFRNAAKKDPQEGYRTLVDSQVVYIHPSSALFNRQ---PEW 180
+VV + QK +G R K D + + T D V +IHPSS + + +
Sbjct: 1220 NVVQVKSPEGKFQKT-STGAVRMQPKSDELK-FVTKNDGYV-HIHPSSVNYQVRHFDSPY 1276
Query: 181 VIYHELVQTTKEYMREVTSIDPKWLVEF 208
++YHE ++T++ ++R+ + + LV F
Sbjct: 1277 LVYHEKIKTSRVFIRDCSMVSVYPLVLF 1304
Score = 45 (20.9 bits), Expect = 9.2e-14, Sum P(4) = 9.2e-14
Identities = 7/16 (43%), Positives = 12/16 (75%)
Query: 317 PPGDVLLFLTGKLDVR 332
PPG +L+FL G +++
Sbjct: 842 PPGAILVFLPGLAEIK 857
Score = 44 (20.5 bits), Expect = 3.2e-05, Sum P(4) = 3.2e-05
Identities = 12/56 (21%), Positives = 22/56 (39%)
Query: 337 GIMDRHKLDVVSAGKNTVRVQKAVCSGFFRNAAKKDPQEGYRTLVDSQVVYIHPSS 392
GI+D + S +N + +C+ + N + EG + V + P S
Sbjct: 1190 GILDATGEEANSNAENPKLISAMLCAALYPNVVQVKSPEGKFQKTSTGAVRMQPKS 1245
Score = 40 (19.1 bits), Expect = 9.2e-14, Sum P(4) = 9.2e-14
Identities = 11/42 (26%), Positives = 23/42 (54%)
Query: 95 YENFVQIRTLKRAQDVRKQLLGIMDRHKLDVVSA----GKNT 132
+++ +Q R A + R+ +L ++ H++ V+S GK T
Sbjct: 530 FQSILQERQSLPAWEERETILKLLSEHQVLVISGMTGCGKTT 571
>TAIR|locus:504954904 [details] [associations]
symbol:ABO6 "ABA overly sensitive 6" species:3702
"Arabidopsis thaliana" [GO:0003676 "nucleic acid binding"
evidence=IEA;ISS] [GO:0003725 "double-stranded RNA binding"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA;ISS]
[GO:0005524 "ATP binding" evidence=IEA;ISS] [GO:0005622
"intracellular" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] InterPro:IPR001159 InterPro:IPR001650
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00035 Pfam:PF00270
Pfam:PF00271 Pfam:PF04408 PROSITE:PS51194 SMART:SM00358
SMART:SM00490 SMART:SM00847 InterPro:IPR014720 GO:GO:0005524
EMBL:CP002688 GenomeReviews:BA000015_GR Gene3D:3.30.160.20
GO:GO:0005622 GO:GO:0003725 EMBL:AB005245 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 EMBL:AB008271 HOGENOM:HOG000247063
KO:K14442 EMBL:AB025625 IPI:IPI00533344 RefSeq:NP_680142.2
UniGene:At.45659 ProteinModelPortal:Q9FF84 SMR:Q9FF84 PaxDb:Q9FF84
PRIDE:Q9FF84 EnsemblPlants:AT5G04895.1 GeneID:830371
KEGG:ath:AT5G04895 TAIR:At5g04895 InParanoid:Q9FF84 OMA:MRAGHSP
PhylomeDB:Q9FF84 ProtClustDB:CLSN2680421 Genevestigator:Q9FF84
Uniprot:Q9FF84
Length = 1161
Score = 214 (80.4 bits), Expect = 1.0e-13, P = 1.0e-13
Identities = 59/208 (28%), Positives = 101/208 (48%)
Query: 16 PLEPNLSKMLIMSVHLQCSDEVLTIVSMLSVQNVFYRPXXXXXXXXXXXXXFNQME-GDH 74
P++P L KMLIM +C D +LTIVS LSV++ F P F+ + DH
Sbjct: 749 PVDPKLGKMLIMGAIFRCFDPILTIVSGLSVRDPFLLPQDKKDLALSAKLRFSAKDYSDH 808
Query: 75 ITLLAVYNSWRN-NKFSNAW--CYENFVQIRTLKRAQDVRKQLLGIMDRHKL---DVVSA 128
+ L+ + W++ + +A+ C+ NF+ +TL+ +RKQ I+ L D+
Sbjct: 809 MALVRAFEGWKDAEREGSAYEFCWRNFLSAQTLQAIHSLRKQFNYILKEAGLVHDDLALN 868
Query: 129 GK---NTVRVQKAVCSGFFRNAAK---KDPQEGYRTLVDSQV-VYIHPSSALFNRQP-EW 180
K N V+ +CSG F A ++ ++T+ D QV +Y + ++ F P W
Sbjct: 869 NKLSHNQSLVRAVICSGLFPGIASVVHRETSMSFKTMDDGQVSLYANSVNSRFPTIPYPW 928
Query: 181 VIYHELVQTTKEYMREVTSIDPKWLVEF 208
+++ E V+ +R+ T + L+ F
Sbjct: 929 LVFGEKVKVNAVLIRDSTGVPDSSLILF 956
Score = 121 (47.7 bits), Expect = 3.8e-10, Sum P(2) = 3.8e-10
Identities = 25/57 (43%), Positives = 39/57 (68%)
Query: 485 LGPDVPELIILPVYSALPSEMQTRIFEAAPPGSRKVVIATNIAETSLTIDGIFYVVD 541
LG D +++L + ++ + Q IFE APP RK+V+ATN+AE S+TI+ + +VVD
Sbjct: 565 LG-DPNRVLLLMCHGSMATAEQRLIFERAPPNIRKIVLATNMAEASITINDVVFVVD 620
Score = 112 (44.5 bits), Expect = 3.8e-10, Sum P(2) = 3.8e-10
Identities = 21/52 (40%), Positives = 37/52 (71%)
Query: 245 LLKQAVKKRPEIKLIVTSATLDAVKFSSYFFEAPIFTIPGRTFPVEVLYTKE 296
+LK+ + +RP+++L++ SATL+A FS+Y+ AP IPG T PV+ + ++
Sbjct: 399 VLKELLPRRPDLRLVLMSATLNAELFSNYYGGAPTIHIPGFTHPVKAHFLED 450
Score = 78 (32.5 bits), Expect = 1.1e-05, Sum P(2) = 1.1e-05
Identities = 21/83 (25%), Positives = 40/83 (48%)
Query: 352 NTVRVQKAVCSGFFRNAAK---KDPQEGYRTLVDSQV-VYIHPSSALFNRQP-EWVIYHE 406
N V+ +CSG F A ++ ++T+ D QV +Y + ++ F P W+++ E
Sbjct: 874 NQSLVRAVICSGLFPGIASVVHRETSMSFKTMDDGQVSLYANSVNSRFPTIPYPWLVFGE 933
Query: 407 LVQTTKEYMREVTSIDPKWLVEF 429
V+ +R+ T + L+ F
Sbjct: 934 KVKVNAVLIRDSTGVPDSSLILF 956
Score = 66 (28.3 bits), Expect = 0.00018, Sum P(2) = 0.00018
Identities = 23/74 (31%), Positives = 36/74 (48%)
Query: 300 DYLDASLITVMQIHL--REPPGDVLLFLTGKLDVRKQLLGIMDRHKLDVVSAGKNTVRVQ 357
D + +LI + H+ +E PG VL+FLTG D+R + D+ K + N RV
Sbjct: 519 DCIGFNLIEAVLCHICRKERPGAVLVFLTGWDDIRS----LSDQIKAHPLLGDPN--RVL 572
Query: 358 KAVCSGFFRNAAKK 371
+C G A ++
Sbjct: 573 LLMCHGSMATAEQR 586
>UNIPROTKB|F1P1F4 [details] [associations]
symbol:DHX30 "Putative ATP-dependent RNA helicase DHX30"
species:9031 "Gallus gallus" [GO:0003725 "double-stranded RNA
binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0003682 "chromatin binding" evidence=IEA] [GO:0042645
"mitochondrial nucleoid" evidence=IEA] InterPro:IPR001159
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00035 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 GO:GO:0005524 GO:GO:0003682 GO:GO:0042645
GO:GO:0003725 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GeneTree:ENSGT00700000104393 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 IPI:IPI00593383 OMA:LHKEERY EMBL:AADN02000053
Ensembl:ENSGALT00000008045 Uniprot:F1P1F4
Length = 1231
Score = 151 (58.2 bits), Expect = 1.1e-13, Sum P(4) = 1.1e-13
Identities = 30/60 (50%), Positives = 42/60 (70%)
Query: 482 MKSLGPDVPELIILPVYSALPSEMQTRIFEAAPPGSRKVVIATNIAETSLTIDGIFYVVD 541
++ LG ++LPV+S +P Q IF+ PPG RK+V+ATNIAETS+TI+ I +VVD
Sbjct: 732 LEMLGSQNSRYLVLPVHSNIPMMDQQNIFQRPPPGVRKIVLATNIAETSITINDIVHVVD 791
Score = 109 (43.4 bits), Expect = 1.1e-13, Sum P(4) = 1.1e-13
Identities = 21/52 (40%), Positives = 33/52 (63%)
Query: 245 LLKQAVKKRPEIKLIVTSATLDAVKFSSYFFEAPIFTIPGRTFPVEVLYTKE 296
LLK K P+++L++ SAT D +FS YF + P+ +PG +PV+ Y +E
Sbjct: 618 LLKGIQKLNPDLRLVLMSATGDNQRFSHYFGDCPVVKVPGFMYPVKEYYLEE 669
Score = 56 (24.8 bits), Expect = 1.1e-13, Sum P(4) = 1.1e-13
Identities = 14/33 (42%), Positives = 19/33 (57%)
Query: 302 LDASLIT--VMQIHLREPPGDVLLFLTGKLDVR 332
LD LIT V+QI PG +L FL G +++
Sbjct: 693 LDLDLITDLVLQIDAHGEPGGILCFLPGWQEIK 725
Score = 37 (18.1 bits), Expect = 1.1e-13, Sum P(4) = 1.1e-13
Identities = 8/20 (40%), Positives = 11/20 (55%)
Query: 7 TPISQMAEFPLEPNLSKMLI 26
T I + +FPL NL +I
Sbjct: 281 TAIRALTQFPLPKNLLAQVI 300
>RGD|1306837 [details] [associations]
symbol:Dhx37 "DEAH (Asp-Glu-Ala-His) box polypeptide 37"
species:10116 "Rattus norvegicus" [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
InterPro:IPR001650 InterPro:IPR003593 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408
PROSITE:PS51194 SMART:SM00382 SMART:SM00490 SMART:SM00847
RGD:1306837 GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 GeneTree:ENSGT00550000074985 KO:K14780 CTD:57647
OMA:AKLQPRT OrthoDB:EOG4P2Q1J IPI:IPI00391385 RefSeq:NP_001099396.2
UniGene:Rn.24493 Ensembl:ENSRNOT00000030823 GeneID:288647
KEGG:rno:288647 UCSC:RGD:1306837 NextBio:628468 ArrayExpress:D4A1R0
Uniprot:D4A1R0
Length = 1150
Score = 156 (60.0 bits), Expect = 1.2e-13, Sum P(3) = 1.2e-13
Identities = 28/70 (40%), Positives = 46/70 (65%)
Query: 372 DPQ--EGYRTLVDSQVVYIHPSSALFNRQPEWVIYHELVQTTKEYMREVTSIDPKWLVEF 429
DP+ Y+T + V+IHPSS LF PE+V+Y E+V+TTK YM+ V++++ +W+
Sbjct: 941 DPKWKNAYKTPLLDDPVFIHPSSVLFRELPEFVVYQEIVETTKMYMKGVSTVEIQWIPSL 1000
Query: 430 APAFFKFSDP 439
P++ +F P
Sbjct: 1001 LPSYCQFDAP 1010
Score = 156 (60.0 bits), Expect = 2.2e-09, Sum P(2) = 2.2e-09
Identities = 28/70 (40%), Positives = 46/70 (65%)
Query: 151 DPQ--EGYRTLVDSQVVYIHPSSALFNRQPEWVIYHELVQTTKEYMREVTSIDPKWLVEF 208
DP+ Y+T + V+IHPSS LF PE+V+Y E+V+TTK YM+ V++++ +W+
Sbjct: 941 DPKWKNAYKTPLLDDPVFIHPSSVLFRELPEFVVYQEIVETTKMYMKGVSTVEIQWIPSL 1000
Query: 209 APAFFKFSDP 218
P++ +F P
Sbjct: 1001 LPSYCQFDAP 1010
Score = 147 (56.8 bits), Expect = 1.1e-12, Sum P(3) = 1.1e-12
Identities = 32/56 (57%), Positives = 39/56 (69%)
Query: 487 PDVP-ELIILPVYSALPSEMQTRIFEAAPPGSRKVVIATNIAETSLTIDGIFYVVD 541
PD L +LP+YS L E Q ++F+ P G+R VIATN+AETSLTI GI YVVD
Sbjct: 575 PDASLPLHVLPLYSLLAPEKQAQVFKPPPEGTRLCVIATNVAETSLTIPGIKYVVD 630
Score = 116 (45.9 bits), Expect = 1.2e-13, Sum P(3) = 1.2e-13
Identities = 33/97 (34%), Positives = 48/97 (49%)
Query: 244 GLLKQAV----KKRPEIKLIVTSATLDAVKFSS----YFFEAPIFTIPGRTFPVEVLYTK 295
GLL + V K+ +KL++ SATL F+ + P+ + R FPV V + K
Sbjct: 382 GLLSRIVALRAKRHLPLKLLIMSATLRVEDFTQNQRLFTTPPPVIKVESRQFPVTVHFNK 441
Query: 296 E-PETDYLDASLITVMQIHLREPPGDVLLFLTGKLDV 331
P DY V +IH P G +L+FLTG+ +V
Sbjct: 442 RTPLDDYSGECFRKVCKIHRMLPAGGILVFLTGQAEV 478
Score = 68 (29.0 bits), Expect = 2.2e-09, Sum P(2) = 2.2e-09
Identities = 15/49 (30%), Positives = 28/49 (57%)
Query: 3 SLVVTPISQ-MAEFPLEPNLSKMLIMSVHLQCSDEVLTIVSMLSVQNVF 50
S +T + + M+ FP+ P +KML +S C + IV+ ++V+ +F
Sbjct: 758 SCPITALGRTMSTFPVAPRYAKMLALSQQHGCLPYTIAIVAAMTVRELF 806
Score = 38 (18.4 bits), Expect = 1.2e-13, Sum P(3) = 1.2e-13
Identities = 8/17 (47%), Positives = 12/17 (70%)
Query: 223 KFKKNQRLEPLQRTNRI 239
K KK+QR E LQ+ + +
Sbjct: 86 KEKKSQRAELLQKLSEV 102
>WB|WBGene00021365 [details] [associations]
symbol:smgl-2 species:6239 "Caenorhabditis elegans"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0009792 "embryo development ending in birth or
egg hatching" evidence=IMP] [GO:0002119 "nematode larval
development" evidence=IMP] [GO:0010171 "body morphogenesis"
evidence=IMP] [GO:0040011 "locomotion" evidence=IMP] [GO:0040007
"growth" evidence=IMP] [GO:0006898 "receptor-mediated endocytosis"
evidence=IMP] [GO:0032940 "secretion by cell" evidence=IMP]
InterPro:IPR001650 InterPro:IPR007502 Pfam:PF00271 Pfam:PF04408
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0009792 GO:GO:0006898 GO:GO:0040007 GO:GO:0002119
GO:GO:0032940 GO:GO:0010171 GO:GO:0040011 GO:GO:0003676
GO:GO:0004386 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
GeneTree:ENSGT00700000104421 EMBL:FO081788 RefSeq:NP_500405.3
ProteinModelPortal:Q9N437 SMR:Q9N437 PaxDb:Q9N437
EnsemblMetazoa:Y37E11AM.1 GeneID:177135 KEGG:cel:CELE_Y37E11AM.1
UCSC:Y37E11AM.1 CTD:177135 WormBase:Y37E11AM.1 InParanoid:Q9N437
OMA:LRADVMC NextBio:895494 Uniprot:Q9N437
Length = 1018
Score = 137 (53.3 bits), Expect = 2.4e-13, Sum P(2) = 2.4e-13
Identities = 28/62 (45%), Positives = 42/62 (67%)
Query: 480 ERMKSLGPDVPELIILPVYSALPSEMQTRIFEAAPPGSRKVVIATNIAETSLTIDGIFYV 539
E +K+ IIL ++S L E Q ++F+ AP G RK +++TN+AETS+TIDGI +V
Sbjct: 309 EHLKNYAELTNGWIILMLHSTLSVEEQDKVFDQAPVGIRKCILSTNVAETSVTIDGIRFV 368
Query: 540 VD 541
+D
Sbjct: 369 ID 370
Score = 125 (49.1 bits), Expect = 2.4e-13, Sum P(2) = 2.4e-13
Identities = 31/101 (30%), Positives = 55/101 (54%)
Query: 244 GLLKQAVKKRPEIKLIVTSATLDAVKFSSYFFEAPIFTIPGRTFPVEVLY--------TK 295
GLL+ KR ++KLI+ SAT++ F YF AP+ +PGR FP++V +
Sbjct: 204 GLLRDLCTKRDDLKLILMSATINLDLFKGYFEGAPVVQVPGRLFPIDVRWHPIKQFIDQS 263
Query: 296 EPETDYLDAS-LITVMQIHLREPP----GDVLLFLTGKLDV 331
+ +T +D + ++++ ++ P GD L+FL G ++
Sbjct: 264 DKKTHKIDPEPYLKILELIDKQFPSTQRGDALIFLNGVAEI 304
Score = 40 (19.1 bits), Expect = 0.00013, Sum P(2) = 0.00013
Identities = 18/67 (26%), Positives = 30/67 (44%)
Query: 200 IDPKWLVE-FAPAFFKFSDPTKLSKFKKNQRLEPLQRTNRISFPPGLLKQAVKKRPEIKL 258
I P WL F A+ + KF+K Q+L LQ+ I+ G + ++ ++ L
Sbjct: 107 ITP-WLYRHFEYAYHVALQFNQHQKFQKLQKLRKLQKELPIAERAGEFETTKSQKTKL-L 164
Query: 259 IVTSATL 265
+T L
Sbjct: 165 FLTEGLL 171
>UNIPROTKB|F1N1A2 [details] [associations]
symbol:DHX57 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005524 "ATP binding" evidence=IEA] [GO:0008270 "zinc
ion binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] InterPro:IPR000571 InterPro:IPR001650
InterPro:IPR006575 InterPro:IPR007502 InterPro:IPR009060
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF00642
Pfam:PF04408 Pfam:PF05773 PROSITE:PS50103 PROSITE:PS51194
SMART:SM00356 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0008270 GO:GO:0003676 InterPro:IPR015940 PROSITE:PS50030
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 SUPFAM:SSF46934
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
GeneTree:ENSGT00550000074257 OMA:RAYKGWQ EMBL:DAAA02030601
EMBL:DAAA02030599 EMBL:DAAA02030600 IPI:IPI00709831
Ensembl:ENSBTAT00000019540 ArrayExpress:F1N1A2 Uniprot:F1N1A2
Length = 1382
Score = 139 (54.0 bits), Expect = 2.4e-13, Sum P(4) = 2.4e-13
Identities = 28/63 (44%), Positives = 41/63 (65%)
Query: 234 QRTNRISFPPGLLKQAVKKRPEIKLIVTSATLDAVKFSSYFFEAPIFTIPGRTFPVEVLY 293
+RT F +LK V +RP +++I+ SATL+A FS YF P+ TIPGRTFPV+ +
Sbjct: 665 ERTEESDFLLLVLKDIVLQRPTLQVILMSATLNAELFSEYFNSCPVITIPGRTFPVDQFF 724
Query: 294 TKE 296
++
Sbjct: 725 LED 727
Score = 132 (51.5 bits), Expect = 2.4e-13, Sum P(4) = 2.4e-13
Identities = 25/49 (51%), Positives = 36/49 (73%)
Query: 493 IILPVYSALPSEMQTRIFEAAPPGSRKVVIATNIAETSLTIDGIFYVVD 541
+I P++S+L SE Q +F P G K++I+TNIAETS+TID + YV+D
Sbjct: 877 VIHPLHSSLSSEEQQAVFVKPPMGVTKIIISTNIAETSITIDDVVYVID 925
Score = 116 (45.9 bits), Expect = 4.9e-05, Sum P(2) = 4.9e-05
Identities = 30/143 (20%), Positives = 61/143 (42%)
Query: 6 VTPIS-QMAEFPLEPNLSKMLIMSVHLQCSDEVLTIVSMLSVQNVFYRPXXXXXXXXXXX 64
+TP+ +A P++ + K+++ +C D LTI + L+ ++ F P
Sbjct: 1047 LTPLGYHLASLPVDVRIGKLMLFGSIFRCLDPALTIAASLAFKSPFVSPWDKKEEANQKK 1106
Query: 65 XXFNQMEGDHITLLAVYNSWRNN-----KFSNAWCYENFVQIRTLKRAQDVRKQLLGIMD 119
F D++ LL Y W+ + + S +C +NF+ R L+ +++Q ++
Sbjct: 1107 LEFAFANSDYLALLRAYKGWQLSMKEGMRASYNYCRQNFLSGRVLQEMASLKRQFTELLS 1166
Query: 120 RHKLDVVSAGKNTVRVQKAVCSG 142
+ V G ++K G
Sbjct: 1167 --DIGFVKEGLRAREIEKRAQGG 1187
Score = 69 (29.3 bits), Expect = 3.9e-07, Sum P(4) = 3.9e-07
Identities = 24/88 (27%), Positives = 44/88 (50%)
Query: 345 DVVSAGKNTVRVQKAVCSGFFRNAAKKDPQEGYRTLVDSQVVYIHPSSALFNRQ---PEW 401
+VV + QK +G R K D + + T D V +IHPSS + + +
Sbjct: 1220 NVVQVKSPEGKFQKT-STGAVRMQPKSDELK-FVTKNDGYV-HIHPSSVNYQVRHFDSPY 1276
Query: 402 VIYHELVQTTKEYMREVTSIDPKWLVEF 429
++YHE ++T++ ++R+ + + LV F
Sbjct: 1277 LVYHEKIKTSRVFIRDCSMVSVYPLVLF 1304
Score = 69 (29.3 bits), Expect = 4.9e-05, Sum P(2) = 4.9e-05
Identities = 24/88 (27%), Positives = 44/88 (50%)
Query: 124 DVVSAGKNTVRVQKAVCSGFFRNAAKKDPQEGYRTLVDSQVVYIHPSSALFNRQ---PEW 180
+VV + QK +G R K D + + T D V +IHPSS + + +
Sbjct: 1220 NVVQVKSPEGKFQKT-STGAVRMQPKSDELK-FVTKNDGYV-HIHPSSVNYQVRHFDSPY 1276
Query: 181 VIYHELVQTTKEYMREVTSIDPKWLVEF 208
++YHE ++T++ ++R+ + + LV F
Sbjct: 1277 LVYHEKIKTSRVFIRDCSMVSVYPLVLF 1304
Score = 44 (20.5 bits), Expect = 0.00010, Sum P(4) = 0.00010
Identities = 12/56 (21%), Positives = 22/56 (39%)
Query: 337 GIMDRHKLDVVSAGKNTVRVQKAVCSGFFRNAAKKDPQEGYRTLVDSQVVYIHPSS 392
GI+D + S +N + +C+ + N + EG + V + P S
Sbjct: 1190 GILDATGEEANSNAENPKLISAMLCAALYPNVVQVKSPEGKFQKTSTGAVRMQPKS 1245
Score = 43 (20.2 bits), Expect = 2.4e-13, Sum P(4) = 2.4e-13
Identities = 12/42 (28%), Positives = 24/42 (57%)
Query: 95 YENFVQIRTLKRAQDVRKQLLGIMDRHKLDVVSA----GKNT 132
+++ +Q R A + R+ +L ++ +H++ VVS GK T
Sbjct: 527 FQSVLQERQSLPAWEERENILKLLSKHQVLVVSGMTGCGKTT 568
Score = 39 (18.8 bits), Expect = 2.4e-13, Sum P(4) = 2.4e-13
Identities = 8/21 (38%), Positives = 13/21 (61%)
Query: 313 HLREP-PGDVLLFLTGKLDVR 332
H P PG +L+FL G +++
Sbjct: 836 HSYPPDPGAILVFLPGLAEIK 856
>FB|FBgn0001330 [details] [associations]
symbol:kz "kurz" species:7227 "Drosophila melanogaster"
[GO:0008026 "ATP-dependent helicase activity" evidence=ISS;NAS]
[GO:0005634 "nucleus" evidence=ISS] [GO:0004386 "helicase activity"
evidence=ISS] [GO:0005524 "ATP binding" evidence=IEA] [GO:0003676
"nucleic acid binding" evidence=IEA] [GO:0022008 "neurogenesis"
evidence=IMP] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 GO:GO:0005524 GO:GO:0022008 EMBL:AE014298
GO:GO:0003723 GO:GO:0004386 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 EMBL:AL009195 GeneTree:ENSGT00550000074985 KO:K14780
OMA:AKLQPRT EMBL:X64418 PIR:T13424 RefSeq:NP_476591.1 UniGene:Dm.33
ProteinModelPortal:O46072 SMR:O46072 STRING:O46072 PaxDb:O46072
PRIDE:O46072 EnsemblMetazoa:FBtr0070419 GeneID:31205
KEGG:dme:Dmel_CG3228 UCSC:CG3228-RA CTD:31205 FlyBase:FBgn0001330
InParanoid:O46072 OrthoDB:EOG4SN03P PhylomeDB:O46072
GenomeRNAi:31205 NextBio:772445 Bgee:O46072 GermOnline:CG3228
Uniprot:O46072
Length = 1192
Score = 141 (54.7 bits), Expect = 2.6e-13, Sum P(2) = 2.6e-13
Identities = 45/136 (33%), Positives = 62/136 (45%)
Query: 406 ELVQTTKEYMREVTSIDPKWLVEFAPAFFKFSDPTKLSKFKKNQRLEPLYNKYEEPNAWR 465
EL K +R + K+L + A D K + ++ + +E +
Sbjct: 536 ELEFDMKRVIRNIRKSKKKFLAQMALPKINLDD----YKLPGDDTEADMHEQPDEDDEQE 591
Query: 466 ISREEIDTACEILYERMKSLGPDVPELIILPVYSALPSEMQTRIFEAAPPGSRKVVIATN 525
E+ D + E G P L +LP+YS L SE Q RIF P G R V++TN
Sbjct: 592 GLEEDNDDELGLEDESGMGSGQRQP-LWVLPLYSLLSSEKQNRIFLPVPDGCRLCVVSTN 650
Query: 526 IAETSLTIDGIFYVVD 541
+AETSLTI I YVVD
Sbjct: 651 VAETSLTIPHIKYVVD 666
Score = 122 (48.0 bits), Expect = 2.6e-13, Sum P(2) = 2.6e-13
Identities = 42/146 (28%), Positives = 69/146 (47%)
Query: 244 GLLKQAV----KKRPEIKLIVTSATLDAVKFSS----YFFEAPIFTIPGRTFPVEVLYTK 295
GLL + V K+ +KLI+ SATL F+ + P+ + R FPV + + K
Sbjct: 393 GLLSRIVPLRHKRGQPLKLIIMSATLRVSDFTENTRLFKIPPPLLKVEARQFPVTIHFQK 452
Query: 296 EPETDYLDASLITVMQIHLREPPGDVLLFLTGKLDVRKQLLGIMDR----HKLDVVSAGK 351
DY+ + ++IH + P G +L+F+TG+ +V QL+ + R H K
Sbjct: 453 RTPDDYVAEAYRKTLKIHNKLPEGGILIFVTGQQEVN-QLVRKLRRTFPYHHAPTKDVAK 511
Query: 352 NTVRVQKAVCSGFFRNAAK--KDPQE 375
N +V + +AA +DP+E
Sbjct: 512 NG-KVSEEEKEETIDDAASTVEDPKE 536
Score = 109 (43.4 bits), Expect = 6.4e-10, Sum P(2) = 6.4e-10
Identities = 20/50 (40%), Positives = 33/50 (66%)
Query: 387 YIHPSSALFNRQPEWVIYHELVQ-----TTKEYMREVTSIDPKWLVEFAP 431
++H SS L + PEWVIY E + +TK ++R +T+I+P+WL+ + P
Sbjct: 990 FLHVSSVLRQKAPEWVIYQEAYELQNGDSTKMFIRGITAIEPEWLLLYVP 1039
Score = 44 (20.5 bits), Expect = 2.8e-05, Sum P(2) = 2.8e-05
Identities = 14/51 (27%), Positives = 18/51 (35%)
Query: 205 LVEFAPAFFKFSDPTKLSKFKKNQRLEPLQRTNRI-SFPPGLLKQAVKKRP 254
L P K P KL R+ R+ PP LLK ++ P
Sbjct: 395 LSRIVPLRHKRGQPLKLIIMSATLRVSDFTENTRLFKIPPPLLKVEARQFP 445
>UNIPROTKB|Q5ZI74 [details] [associations]
symbol:DHX30 "Putative ATP-dependent RNA helicase DHX30"
species:9031 "Gallus gallus" [GO:0003725 "double-stranded RNA
binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0003682 "chromatin binding" evidence=ISS] [GO:0042645
"mitochondrial nucleoid" evidence=ISS] InterPro:IPR001159
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00035 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS50137 PROSITE:PS51194
SMART:SM00490 SMART:SM00847 GO:GO:0005524 GO:GO:0003682
GO:GO:0042645 GO:GO:0003725 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 CTD:22907 HOGENOM:HOG000112212 HOVERGEN:HBG081437
KO:K13185 OrthoDB:EOG4VHK5M EMBL:AJ720910 IPI:IPI00593383
RefSeq:NP_001012869.1 UniGene:Gga.2762 ProteinModelPortal:Q5ZI74
SMR:Q5ZI74 GeneID:420376 KEGG:gga:420376 InParanoid:Q5ZI74
NextBio:20823291 Uniprot:Q5ZI74
Length = 1231
Score = 151 (58.2 bits), Expect = 2.9e-13, Sum P(4) = 2.9e-13
Identities = 30/60 (50%), Positives = 42/60 (70%)
Query: 482 MKSLGPDVPELIILPVYSALPSEMQTRIFEAAPPGSRKVVIATNIAETSLTIDGIFYVVD 541
++ LG ++LPV+S +P Q IF+ PPG RK+V+ATNIAETS+TI+ I +VVD
Sbjct: 732 LEMLGSQNSRYLVLPVHSNIPMMDQQNIFQRPPPGVRKIVLATNIAETSITINDIVHVVD 791
Score = 105 (42.0 bits), Expect = 2.9e-13, Sum P(4) = 2.9e-13
Identities = 21/52 (40%), Positives = 32/52 (61%)
Query: 245 LLKQAVKKRPEIKLIVTSATLDAVKFSSYFFEAPIFTIPGRTFPVEVLYTKE 296
LLK K P+++L++ SAT D +FS YF P+ +PG +PV+ Y +E
Sbjct: 618 LLKGIQKLNPDLRLVLMSATGDNQRFSHYFGGCPVVKVPGFMYPVKEYYLEE 669
Score = 56 (24.8 bits), Expect = 2.9e-13, Sum P(4) = 2.9e-13
Identities = 14/33 (42%), Positives = 19/33 (57%)
Query: 302 LDASLIT--VMQIHLREPPGDVLLFLTGKLDVR 332
LD LIT V+QI PG +L FL G +++
Sbjct: 693 LDLDLITDLVLQIDAHGEPGGILCFLPGWQEIK 725
Score = 37 (18.1 bits), Expect = 2.9e-13, Sum P(4) = 2.9e-13
Identities = 8/20 (40%), Positives = 11/20 (55%)
Query: 7 TPISQMAEFPLEPNLSKMLI 26
T I + +FPL NL +I
Sbjct: 281 TAIRALTQFPLPKNLLAQVI 300
>MGI|MGI:2147067 [details] [associations]
symbol:Dhx57 "DEAH (Asp-Glu-Ala-Asp/His) box polypeptide 57"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005575 "cellular_component"
evidence=ND] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0008150 "biological_process" evidence=ND]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0016787 "hydrolase
activity" evidence=IEA] [GO:0046872 "metal ion binding"
evidence=IEA] InterPro:IPR000571 InterPro:IPR001650
InterPro:IPR006575 InterPro:IPR007502 InterPro:IPR009060
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF00642
Pfam:PF04408 Pfam:PF05773 PROSITE:PS00690 PROSITE:PS50103
PROSITE:PS51194 SMART:SM00356 SMART:SM00490 SMART:SM00847
MGI:MGI:2147067 GO:GO:0005524 GO:GO:0046872 GO:GO:0008270
GO:GO:0003676 InterPro:IPR015940 SMART:SM00165 PROSITE:PS50030
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 SUPFAM:SSF46934
eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
GeneTree:ENSGT00550000074257 CTD:90957 HOVERGEN:HBG080658 KO:K13026
OMA:RAYKGWQ OrthoDB:EOG4ZS929 EMBL:AK035344 EMBL:AK053628
EMBL:AK162192 EMBL:BC026474 EMBL:BC062952 EMBL:BC065169
EMBL:BC066091 IPI:IPI00420351 IPI:IPI00453609 IPI:IPI00752611
IPI:IPI00753147 IPI:IPI00755243 RefSeq:NP_001157231.1
RefSeq:NP_945180.2 UniGene:Mm.12412 ProteinModelPortal:Q6P5D3
SMR:Q6P5D3 PhosphoSite:Q6P5D3 PaxDb:Q6P5D3 PRIDE:Q6P5D3
Ensembl:ENSMUST00000038166 Ensembl:ENSMUST00000086555 GeneID:106794
KEGG:mmu:106794 UCSC:uc008dqx.2 UCSC:uc008dqy.2 UCSC:uc008dqz.2
UCSC:uc008dra.2 UCSC:uc008drb.1 InParanoid:Q6P5D3 NextBio:358388
Bgee:Q6P5D3 CleanEx:MM_DHX57 Genevestigator:Q6P5D3
GermOnline:ENSMUSG00000035051 Uniprot:Q6P5D3
Length = 1388
Score = 132 (51.5 bits), Expect = 3.5e-13, Sum P(4) = 3.5e-13
Identities = 25/49 (51%), Positives = 36/49 (73%)
Query: 493 IILPVYSALPSEMQTRIFEAAPPGSRKVVIATNIAETSLTIDGIFYVVD 541
+I P++S+L SE Q +F P G K++I+TNIAETS+TID + YV+D
Sbjct: 884 VIHPLHSSLSSEEQQAVFVKPPMGVTKIIISTNIAETSITIDDVVYVID 932
Score = 130 (50.8 bits), Expect = 3.5e-13, Sum P(4) = 3.5e-13
Identities = 27/63 (42%), Positives = 39/63 (61%)
Query: 234 QRTNRISFPPGLLKQAVKKRPEIKLIVTSATLDAVKFSSYFFEAPIFTIPGRTFPVEVLY 293
+RT F +LK V +R +++I+ SATLDA FS YF P+ TIPGR FPV+ +
Sbjct: 673 ERTEESDFLLLVLKDIVMQRATLQVILMSATLDAGLFSKYFSYCPVITIPGRAFPVDQFF 732
Query: 294 TKE 296
++
Sbjct: 733 LED 735
Score = 126 (49.4 bits), Expect = 1.6e-06, Sum P(3) = 1.6e-06
Identities = 31/143 (21%), Positives = 63/143 (44%)
Query: 6 VTPIS-QMAEFPLEPNLSKMLIMSVHLQCSDEVLTIVSMLSVQNVFYRPXXXXXXXXXXX 64
+TP+ +A P++ + K++++ +C D LTI + L+ ++ F P
Sbjct: 1054 LTPLGYHLASLPVDVRIGKLMLLGSIFRCLDPALTIAASLAFKSPFVSPWDKKEEANQKK 1113
Query: 65 XXFNQMEGDHITLLAVYNSWRNNKFSNA-----WCYENFVQIRTLKRAQDVRKQLLGIMD 119
F D++ LL Y W+ + +A +C +NF+ RTL+ +++Q ++
Sbjct: 1114 LEFAFANSDYLALLCAYKGWQLSTKESARASYNYCRQNFLSGRTLQEMASLKRQFTELLS 1173
Query: 120 RHKLDVVSAGKNTVRVQKAVCSG 142
+ V G ++K G
Sbjct: 1174 --DIGFVKEGLRAKEIEKRAQGG 1194
Score = 65 (27.9 bits), Expect = 5.2e-08, Sum P(5) = 5.2e-08
Identities = 14/47 (29%), Positives = 29/47 (61%)
Query: 386 VYIHPSSALFNRQ---PEWVIYHELVQTTKEYMREVTSIDPKWLVEF 429
V+IHPSS + + +++YHE ++T++ ++R+ + + LV F
Sbjct: 1264 VHIHPSSVNYQVRHFDSPYLLYHEKIKTSRVFIRDCSMVSVYPLVLF 1310
Score = 65 (27.9 bits), Expect = 1.1e-05, Sum P(2) = 1.1e-05
Identities = 14/47 (29%), Positives = 29/47 (61%)
Query: 165 VYIHPSSALFNRQ---PEWVIYHELVQTTKEYMREVTSIDPKWLVEF 208
V+IHPSS + + +++YHE ++T++ ++R+ + + LV F
Sbjct: 1264 VHIHPSSVNYQVRHFDSPYLLYHEKIKTSRVFIRDCSMVSVYPLVLF 1310
Score = 53 (23.7 bits), Expect = 5.2e-08, Sum P(5) = 5.2e-08
Identities = 13/57 (22%), Positives = 24/57 (42%)
Query: 337 GIMDRHKLDVVSAGKNTVRVQKAVCSGFFRNAAKKDPQEGYRTLVDSQVVYIHPSSA 393
G++D + + +N + +C+ + N + EG S VV + P SA
Sbjct: 1196 GVLDATGEEANTNAENPKLISAVLCAALYPNVVQVKTPEGKFQKTSSGVVRLQPKSA 1252
Score = 46 (21.3 bits), Expect = 3.5e-13, Sum P(4) = 3.5e-13
Identities = 8/16 (50%), Positives = 12/16 (75%)
Query: 317 PPGDVLLFLTGKLDVR 332
PPG VL+FL G +++
Sbjct: 848 PPGAVLVFLPGLAEIK 863
Score = 44 (20.5 bits), Expect = 3.5e-13, Sum P(4) = 3.5e-13
Identities = 12/42 (28%), Positives = 23/42 (54%)
Query: 95 YENFVQIRTLKRAQDVRKQLLGIMDRHKLDVVSA----GKNT 132
+ +Q R L A + R+ +L ++ +H++ V+S GK T
Sbjct: 535 FHAILQERQLLPAWEERETILKLLSKHQVVVISGMTGCGKTT 576
>UNIPROTKB|P37024 [details] [associations]
symbol:hrpB "predicted ATP-dependent helicase"
species:83333 "Escherichia coli K-12" [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0004386 "helicase
activity" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] InterPro:IPR001650 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
EMBL:U00096 EMBL:AP009048 GenomeReviews:AP009048_GR
GenomeReviews:U00096_GR GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643 GO:GO:0008026
EMBL:D42122 PIR:D64738 RefSeq:NP_414690.4 RefSeq:YP_488451.1
ProteinModelPortal:P37024 SMR:P37024 DIP:DIP-9938N IntAct:P37024
MINT:MINT-1231977 PRIDE:P37024 EnsemblBacteria:EBESCT00000000663
EnsemblBacteria:EBESCT00000016535 GeneID:12932407 GeneID:944845
KEGG:ecj:Y75_p0145 KEGG:eco:b0148 PATRIC:32115403 EchoBASE:EB2233
EcoGene:EG12329 HOGENOM:HOG000244609 KO:K03579 OMA:GILTRMI
ProtClustDB:PRK11664 BioCyc:EcoCyc:EG12329-MONOMER
BioCyc:ECOL316407:JW0144-MONOMER Genevestigator:P37024
InterPro:IPR010225 InterPro:IPR013689 Pfam:PF08482
PIRSF:PIRSF005496 TIGRFAMs:TIGR01970 Uniprot:P37024
Length = 809
Score = 134 (52.2 bits), Expect = 4.6e-13, Sum P(2) = 4.6e-13
Identities = 33/63 (52%), Positives = 42/63 (66%)
Query: 480 ERMKS-LGPDVPELIILPVYSALPSEMQTRIFEAAPPGSRKVVIATNIAETSLTIDGIFY 538
E++ S +G DV ++ P+Y AL Q + AP G RKVV+ATNIAETSLTI+GI
Sbjct: 230 EQLASRIGSDV---LLCPLYGALSLNDQRKAILPAPQGMRKVVLATNIAETSLTIEGIRL 286
Query: 539 VVD 541
VVD
Sbjct: 287 VVD 289
Score = 123 (48.4 bits), Expect = 4.6e-13, Sum P(2) = 4.6e-13
Identities = 31/95 (32%), Positives = 48/95 (50%)
Query: 253 RPEIKLIVTSATLDAVKFSSYFFEAPIFTIPGRTFPVEVLYTKEPETDYLDASLITVMQI 312
R ++KL++ SATLD + EAP+ GR+FPVE Y P D ++
Sbjct: 147 RDDLKLLIMSATLDNDRLQQMLPEAPVVISEGRSFPVERRYLPLPAHQRFDDAVAVATAE 206
Query: 313 HLREPPGDVLLFLTGKLDVRKQLLGIMDRHKLDVV 347
LR+ G +LLFL G ++++ + R DV+
Sbjct: 207 MLRQESGSLLLFLPGVGEIQRVQEQLASRIGSDVL 241
>UNIPROTKB|F1M8G5 [details] [associations]
symbol:Dhx57 "Protein Dhx57" species:10116 "Rattus
norvegicus" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] InterPro:IPR000571 InterPro:IPR001650
InterPro:IPR006575 InterPro:IPR007502 InterPro:IPR009060
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF00642
Pfam:PF04408 Pfam:PF05773 PROSITE:PS50103 PROSITE:PS51194
SMART:SM00356 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0008270 GO:GO:0003676 InterPro:IPR015940 SMART:SM00165
PROSITE:PS50030 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
SUPFAM:SSF46934 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
RGD:1310340 NextBio:689608 IPI:IPI00391644
Ensembl:ENSRNOT00000037714 ArrayExpress:F1M8G5 Uniprot:F1M8G5
Length = 1338
Score = 131 (51.2 bits), Expect = 4.8e-13, Sum P(4) = 4.8e-13
Identities = 25/49 (51%), Positives = 36/49 (73%)
Query: 493 IILPVYSALPSEMQTRIFEAAPPGSRKVVIATNIAETSLTIDGIFYVVD 541
+I P++S+L SE Q +F P G K++I+TNIAETS+TID + YV+D
Sbjct: 834 VIHPLHSSLSSEEQQAVFVKPPLGVTKIIISTNIAETSITIDDVVYVID 882
Score = 130 (50.8 bits), Expect = 4.8e-13, Sum P(4) = 4.8e-13
Identities = 27/63 (42%), Positives = 39/63 (61%)
Query: 234 QRTNRISFPPGLLKQAVKKRPEIKLIVTSATLDAVKFSSYFFEAPIFTIPGRTFPVEVLY 293
+RT F +LK V +R +++I+ SATLDA FS YF P+ TIPGR FPV+ +
Sbjct: 623 ERTEESDFLLLVLKDIVMQRATLQVILMSATLDAGLFSKYFSYCPVITIPGRAFPVDQFF 682
Query: 294 TKE 296
++
Sbjct: 683 LED 685
Score = 126 (49.4 bits), Expect = 1.4e-06, Sum P(3) = 1.4e-06
Identities = 31/143 (21%), Positives = 63/143 (44%)
Query: 6 VTPIS-QMAEFPLEPNLSKMLIMSVHLQCSDEVLTIVSMLSVQNVFYRPXXXXXXXXXXX 64
+TP+ +A P++ + K++++ +C D LTI + L+ ++ F P
Sbjct: 1004 LTPLGYHLASLPVDVRIGKLMLLGSIFRCLDPALTIAASLAFKSPFVSPWDKKEEANQKK 1063
Query: 65 XXFNQMEGDHITLLAVYNSWRNNKFSNA-----WCYENFVQIRTLKRAQDVRKQLLGIMD 119
F D++ LL Y W+ + +A +C +NF+ RTL+ +++Q ++
Sbjct: 1064 LEFAFANSDYLALLCAYKGWQLSTKESARASYNYCRQNFLSGRTLQEMASLKRQFTELLS 1123
Query: 120 RHKLDVVSAGKNTVRVQKAVCSG 142
+ V G ++K G
Sbjct: 1124 --DIGFVKEGLRAKEIEKRAQGG 1144
Score = 65 (27.9 bits), Expect = 5.4e-08, Sum P(5) = 5.4e-08
Identities = 14/47 (29%), Positives = 29/47 (61%)
Query: 386 VYIHPSSALFNRQ---PEWVIYHELVQTTKEYMREVTSIDPKWLVEF 429
V+IHPSS + + +++YHE ++T++ ++R+ + + LV F
Sbjct: 1214 VHIHPSSVNYQVRHFDSPYLLYHEKIKTSRVFIRDCSMVSVYPLVLF 1260
Score = 65 (27.9 bits), Expect = 1.0e-05, Sum P(2) = 1.0e-05
Identities = 14/47 (29%), Positives = 29/47 (61%)
Query: 165 VYIHPSSALFNRQ---PEWVIYHELVQTTKEYMREVTSIDPKWLVEF 208
V+IHPSS + + +++YHE ++T++ ++R+ + + LV F
Sbjct: 1214 VHIHPSSVNYQVRHFDSPYLLYHEKIKTSRVFIRDCSMVSVYPLVLF 1260
Score = 53 (23.7 bits), Expect = 5.4e-08, Sum P(5) = 5.4e-08
Identities = 13/57 (22%), Positives = 24/57 (42%)
Query: 337 GIMDRHKLDVVSAGKNTVRVQKAVCSGFFRNAAKKDPQEGYRTLVDSQVVYIHPSSA 393
G++D + + +N + +C+ + N + EG S VV + P SA
Sbjct: 1146 GVLDATGEEANTNAENPKLISAVLCAALYPNVVQVKTPEGKFQKTSSGVVRLQPKSA 1202
Score = 45 (20.9 bits), Expect = 4.8e-13, Sum P(4) = 4.8e-13
Identities = 7/16 (43%), Positives = 12/16 (75%)
Query: 317 PPGDVLLFLTGKLDVR 332
PPG +L+FL G +++
Sbjct: 798 PPGAILVFLPGLAEIK 813
Score = 44 (20.5 bits), Expect = 4.8e-13, Sum P(4) = 4.8e-13
Identities = 12/42 (28%), Positives = 23/42 (54%)
Query: 95 YENFVQIRTLKRAQDVRKQLLGIMDRHKLDVVSA----GKNT 132
+ +Q R L A + R+ +L ++ +H++ V+S GK T
Sbjct: 485 FHAILQERQLLPAWEERETILKLLSKHQVVVISGMTGCGKTT 526
>UNIPROTKB|E2RHZ3 [details] [associations]
symbol:DHX37 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR003593 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS51194
SMART:SM00382 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
GeneTree:ENSGT00550000074985 KO:K14780 CTD:57647 OMA:AKLQPRT
EMBL:AAEX03014623 RefSeq:XP_534640.2 Ensembl:ENSCAFT00000011159
GeneID:477442 KEGG:cfa:477442 NextBio:20852918 Uniprot:E2RHZ3
Length = 1149
Score = 151 (58.2 bits), Expect = 5.2e-13, Sum P(3) = 5.2e-13
Identities = 25/66 (37%), Positives = 44/66 (66%)
Query: 374 QEGYRTLVDSQVVYIHPSSALFNRQPEWVIYHELVQTTKEYMREVTSIDPKWLVEFAPAF 433
+ Y+T + V+IHPSS LF PE+V+Y E+++TTK YM+ V++++ +W+ P++
Sbjct: 946 KNAYKTPLLDDPVFIHPSSVLFKELPEFVVYQEIMETTKMYMKGVSAVEVQWIPVLLPSY 1005
Query: 434 FKFSDP 439
+F P
Sbjct: 1006 CQFDKP 1011
Score = 151 (58.2 bits), Expect = 1.8e-09, Sum P(2) = 1.8e-09
Identities = 25/66 (37%), Positives = 44/66 (66%)
Query: 153 QEGYRTLVDSQVVYIHPSSALFNRQPEWVIYHELVQTTKEYMREVTSIDPKWLVEFAPAF 212
+ Y+T + V+IHPSS LF PE+V+Y E+++TTK YM+ V++++ +W+ P++
Sbjct: 946 KNAYKTPLLDDPVFIHPSSVLFKELPEFVVYQEIMETTKMYMKGVSAVEVQWIPVLLPSY 1005
Query: 213 FKFSDP 218
+F P
Sbjct: 1006 CQFDKP 1011
Score = 147 (56.8 bits), Expect = 1.4e-12, Sum P(3) = 1.4e-12
Identities = 31/56 (55%), Positives = 39/56 (69%)
Query: 487 PDVP-ELIILPVYSALPSEMQTRIFEAAPPGSRKVVIATNIAETSLTIDGIFYVVD 541
PD L +LP+YS L E Q ++F+ P G+R V+ATN+AETSLTI GI YVVD
Sbjct: 576 PDASLPLHVLPLYSLLAPEKQAQVFQPPPEGTRLCVVATNVAETSLTIPGIKYVVD 631
Score = 114 (45.2 bits), Expect = 5.2e-13, Sum P(3) = 5.2e-13
Identities = 34/97 (35%), Positives = 48/97 (49%)
Query: 244 GLLKQAVKKRPE----IKLIVTSATLDAVKFSSY--FFEAP--IFTIPGRTFPVEVLYTK 295
GLL + V R + +KL++ SATL F+ F P + + R FPV V + K
Sbjct: 380 GLLSRIVSLRAKRHLPLKLLIMSATLRVEDFTQNQRLFPQPPPVIKVESRQFPVTVHFNK 439
Query: 296 E-PETDYLDASLITVMQIHLREPPGDVLLFLTGKLDV 331
P DY V +IH P G +L+FLTG+ +V
Sbjct: 440 RTPLEDYSGECFRKVCKIHRMLPAGGILVFLTGQAEV 476
Score = 74 (31.1 bits), Expect = 1.8e-09, Sum P(2) = 1.8e-09
Identities = 16/46 (34%), Positives = 28/46 (60%)
Query: 6 VTPISQ-MAEFPLEPNLSKMLIMSVHLQCSDEVLTIVSMLSVQNVF 50
+T + + MA FP+ P +KML +S C +TIV+ ++V+ +F
Sbjct: 762 ITALGRTMATFPVAPRYAKMLALSRQHGCLPYAITIVAAMTVRELF 807
Score = 39 (18.8 bits), Expect = 5.2e-13, Sum P(3) = 5.2e-13
Identities = 8/17 (47%), Positives = 12/17 (70%)
Query: 223 KFKKNQRLEPLQRTNRI 239
K KK+QR E LQ+ + +
Sbjct: 87 KEKKSQRAEMLQKLSEV 103
>UNIPROTKB|F1LSC4 [details] [associations]
symbol:Dhx57 "Protein Dhx57" species:10116 "Rattus
norvegicus" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] InterPro:IPR000571 InterPro:IPR001650
InterPro:IPR006575 InterPro:IPR007502 InterPro:IPR009060
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF00642
Pfam:PF04408 Pfam:PF05773 PROSITE:PS50103 PROSITE:PS51194
SMART:SM00356 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0008270 GO:GO:0003676 InterPro:IPR015940 SMART:SM00165
PROSITE:PS50030 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
SUPFAM:SSF46934 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
GeneTree:ENSGT00550000074257 CTD:90957 KO:K13026 OMA:RAYKGWQ
IPI:IPI00369334 RefSeq:NP_001178836.1 UniGene:Rn.15951
Ensembl:ENSRNOT00000037705 GeneID:366532 KEGG:rno:366532
RGD:1310340 NextBio:689608 ArrayExpress:F1LSC4 Uniprot:F1LSC4
Length = 1391
Score = 131 (51.2 bits), Expect = 5.7e-13, Sum P(4) = 5.7e-13
Identities = 25/49 (51%), Positives = 36/49 (73%)
Query: 493 IILPVYSALPSEMQTRIFEAAPPGSRKVVIATNIAETSLTIDGIFYVVD 541
+I P++S+L SE Q +F P G K++I+TNIAETS+TID + YV+D
Sbjct: 887 VIHPLHSSLSSEEQQAVFVKPPLGVTKIIISTNIAETSITIDDVVYVID 935
Score = 130 (50.8 bits), Expect = 5.7e-13, Sum P(4) = 5.7e-13
Identities = 27/63 (42%), Positives = 39/63 (61%)
Query: 234 QRTNRISFPPGLLKQAVKKRPEIKLIVTSATLDAVKFSSYFFEAPIFTIPGRTFPVEVLY 293
+RT F +LK V +R +++I+ SATLDA FS YF P+ TIPGR FPV+ +
Sbjct: 676 ERTEESDFLLLVLKDIVMQRATLQVILMSATLDAGLFSKYFSYCPVITIPGRAFPVDQFF 735
Query: 294 TKE 296
++
Sbjct: 736 LED 738
Score = 126 (49.4 bits), Expect = 1.6e-06, Sum P(3) = 1.6e-06
Identities = 31/143 (21%), Positives = 63/143 (44%)
Query: 6 VTPIS-QMAEFPLEPNLSKMLIMSVHLQCSDEVLTIVSMLSVQNVFYRPXXXXXXXXXXX 64
+TP+ +A P++ + K++++ +C D LTI + L+ ++ F P
Sbjct: 1057 LTPLGYHLASLPVDVRIGKLMLLGSIFRCLDPALTIAASLAFKSPFVSPWDKKEEANQKK 1116
Query: 65 XXFNQMEGDHITLLAVYNSWRNNKFSNA-----WCYENFVQIRTLKRAQDVRKQLLGIMD 119
F D++ LL Y W+ + +A +C +NF+ RTL+ +++Q ++
Sbjct: 1117 LEFAFANSDYLALLCAYKGWQLSTKESARASYNYCRQNFLSGRTLQEMASLKRQFTELLS 1176
Query: 120 RHKLDVVSAGKNTVRVQKAVCSG 142
+ V G ++K G
Sbjct: 1177 --DIGFVKEGLRAKEIEKRAQGG 1197
Score = 65 (27.9 bits), Expect = 6.6e-08, Sum P(5) = 6.6e-08
Identities = 14/47 (29%), Positives = 29/47 (61%)
Query: 386 VYIHPSSALFNRQ---PEWVIYHELVQTTKEYMREVTSIDPKWLVEF 429
V+IHPSS + + +++YHE ++T++ ++R+ + + LV F
Sbjct: 1267 VHIHPSSVNYQVRHFDSPYLLYHEKIKTSRVFIRDCSMVSVYPLVLF 1313
Score = 65 (27.9 bits), Expect = 1.1e-05, Sum P(2) = 1.1e-05
Identities = 14/47 (29%), Positives = 29/47 (61%)
Query: 165 VYIHPSSALFNRQ---PEWVIYHELVQTTKEYMREVTSIDPKWLVEF 208
V+IHPSS + + +++YHE ++T++ ++R+ + + LV F
Sbjct: 1267 VHIHPSSVNYQVRHFDSPYLLYHEKIKTSRVFIRDCSMVSVYPLVLF 1313
Score = 53 (23.7 bits), Expect = 6.6e-08, Sum P(5) = 6.6e-08
Identities = 13/57 (22%), Positives = 24/57 (42%)
Query: 337 GIMDRHKLDVVSAGKNTVRVQKAVCSGFFRNAAKKDPQEGYRTLVDSQVVYIHPSSA 393
G++D + + +N + +C+ + N + EG S VV + P SA
Sbjct: 1199 GVLDATGEEANTNAENPKLISAVLCAALYPNVVQVKTPEGKFQKTSSGVVRLQPKSA 1255
Score = 45 (20.9 bits), Expect = 5.7e-13, Sum P(4) = 5.7e-13
Identities = 7/16 (43%), Positives = 12/16 (75%)
Query: 317 PPGDVLLFLTGKLDVR 332
PPG +L+FL G +++
Sbjct: 851 PPGAILVFLPGLAEIK 866
Score = 44 (20.5 bits), Expect = 5.7e-13, Sum P(4) = 5.7e-13
Identities = 12/42 (28%), Positives = 23/42 (54%)
Query: 95 YENFVQIRTLKRAQDVRKQLLGIMDRHKLDVVSA----GKNT 132
+ +Q R L A + R+ +L ++ +H++ V+S GK T
Sbjct: 538 FHAILQERQLLPAWEERETILKLLSKHQVVVISGMTGCGKTT 579
>RGD|1308548 [details] [associations]
symbol:Dhx9 "DEAH (Asp-Glu-Ala-His) box polypeptide 9"
species:10116 "Rattus norvegicus" [GO:0001085 "RNA polymerase II
transcription factor binding" evidence=IEA;ISO] [GO:0003725
"double-stranded RNA binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=ISO]
[GO:0005730 "nucleolus" evidence=IEA;ISO] [GO:0005813 "centrosome"
evidence=IEA;ISO] [GO:0007623 "circadian rhythm" evidence=IEA;ISO]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0030529 "ribonucleoprotein complex" evidence=IEA;ISO]
[GO:0034605 "cellular response to heat" evidence=IEA;ISO]
[GO:0070934 "CRD-mediated mRNA stabilization" evidence=IEA;ISO]
[GO:0070937 "CRD-mediated mRNA stability complex" evidence=IEA;ISO]
InterPro:IPR001159 InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00035 Pfam:PF00270
Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690 PROSITE:PS50137
PROSITE:PS51194 SMART:SM00358 SMART:SM00490 SMART:SM00847
InterPro:IPR014720 RGD:1308548 GO:GO:0005524 Gene3D:3.30.160.20
GO:GO:0005622 GO:GO:0003725 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
GeneTree:ENSGT00550000074257 CTD:1660 KO:K13184 OrthoDB:EOG4HHP1J
EMBL:CH473958 IPI:IPI00947663 RefSeq:NP_001100654.1
UniGene:Rn.107359 Ensembl:ENSRNOT00000064860 GeneID:304859
KEGG:rno:304859 UCSC:RGD:1308548 NextBio:653729 Uniprot:D4A9D6
Length = 1174
Score = 139 (54.0 bits), Expect = 8.4e-13, Sum P(2) = 8.4e-13
Identities = 26/60 (43%), Positives = 41/60 (68%)
Query: 494 ILPVYSALPSEMQTRIFEAAPPGSRKVVIATNIAETSLTIDGIFYVVDPFDIEVRQAKYH 553
ILP++S +P E Q ++F+ P G KV+++TNIAETS+TI+ + YV+D +V+ H
Sbjct: 686 ILPLHSQIPREEQRKVFDPVPDGVTKVILSTNIAETSITINDVVYVIDSCKQKVKLFTAH 745
Score = 119 (46.9 bits), Expect = 8.4e-13, Sum P(2) = 8.4e-13
Identities = 20/52 (38%), Positives = 33/52 (63%)
Query: 245 LLKQAVKKRPEIKLIVTSATLDAVKFSSYFFEAPIFTIPGRTFPVEVLYTKE 296
+L+ V PE+++++ SAT+D F YFF PI + GRTFPV+ + ++
Sbjct: 529 VLRDVVLAYPEVRIVLMSATIDTTMFCEYFFNCPIIEVYGRTFPVQEYFLED 580
Score = 40 (19.1 bits), Expect = 0.00011, Sum P(2) = 0.00011
Identities = 13/45 (28%), Positives = 22/45 (48%)
Query: 283 PGRTFPVEVLYTKEPETDYLDASLITVMQIHLREPPGDVLLFLTG 327
P + L KE + ++A L + +++ PG VL+FL G
Sbjct: 621 PETKLSMSQLNEKETPFELIEALLKYIETLNV---PGAVLVFLPG 662
>MGI|MGI:108177 [details] [associations]
symbol:Dhx9 "DEAH (Asp-Glu-Ala-His) box polypeptide 9"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0001085 "RNA polymerase II transcription factor
binding" evidence=ISO] [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA] [GO:0003723
"RNA binding" evidence=IEA] [GO:0003725 "double-stranded RNA
binding" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=ISO] [GO:0005730 "nucleolus" evidence=IDA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0005813 "centrosome" evidence=ISO]
[GO:0007623 "circadian rhythm" evidence=IMP] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0030529 "ribonucleoprotein
complex" evidence=ISO] [GO:0034605 "cellular response to heat"
evidence=IDA] [GO:0070934 "CRD-mediated mRNA stabilization"
evidence=ISO] [GO:0070937 "CRD-mediated mRNA stability complex"
evidence=ISO] InterPro:IPR001159 InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00035 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS50137 PROSITE:PS51194 SMART:SM00358 SMART:SM00490
SMART:SM00847 InterPro:IPR014720 MGI:MGI:108177 GO:GO:0005524
GO:GO:0034605 GO:GO:0005730 GO:GO:0003677 GO:GO:0007623
Gene3D:3.30.160.20 GO:GO:0030529 GO:GO:0003725 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 HOGENOM:HOG000247063 CTD:1660
HOVERGEN:HBG039429 KO:K13184 OrthoDB:EOG4HHP1J GO:GO:0070937
EMBL:U91922 EMBL:AF023530 EMBL:AY512925 EMBL:BC089159 EMBL:AK013423
EMBL:U92080 IPI:IPI00339468 IPI:IPI00607914 IPI:IPI00875791
RefSeq:NP_031868.2 UniGene:Mm.20000 PDB:1UIL PDB:1WHQ PDB:2RS6
PDB:2RS7 PDBsum:1UIL PDBsum:1WHQ PDBsum:2RS6 PDBsum:2RS7
ProteinModelPortal:O70133 SMR:O70133 IntAct:O70133 STRING:O70133
PhosphoSite:O70133 PaxDb:O70133 PRIDE:O70133 GeneID:13211
KEGG:mmu:13211 UCSC:uc007czy.1 InParanoid:O70133 ChiTaRS:DHX9
EvolutionaryTrace:O70133 NextBio:283382 CleanEx:MM_DHX9
Genevestigator:O70133 GermOnline:ENSMUSG00000042699 Uniprot:O70133
Length = 1380
Score = 139 (54.0 bits), Expect = 1.2e-12, Sum P(2) = 1.2e-12
Identities = 26/60 (43%), Positives = 41/60 (68%)
Query: 494 ILPVYSALPSEMQTRIFEAAPPGSRKVVIATNIAETSLTIDGIFYVVDPFDIEVRQAKYH 553
ILP++S +P E Q ++F+ P G KV+++TNIAETS+TI+ + YV+D +V+ H
Sbjct: 685 ILPLHSQIPREEQRKVFDPVPDGVTKVILSTNIAETSITINDVVYVIDSCKQKVKLFTAH 744
Score = 119 (46.9 bits), Expect = 1.2e-12, Sum P(2) = 1.2e-12
Identities = 20/52 (38%), Positives = 33/52 (63%)
Query: 245 LLKQAVKKRPEIKLIVTSATLDAVKFSSYFFEAPIFTIPGRTFPVEVLYTKE 296
+L+ V PE+++++ SAT+D F YFF PI + GRTFPV+ + ++
Sbjct: 528 VLRDVVLAYPEVRIVLMSATIDTTMFCEYFFNCPIIEVYGRTFPVQEYFLED 579
Score = 40 (19.1 bits), Expect = 0.00016, Sum P(2) = 0.00016
Identities = 13/45 (28%), Positives = 22/45 (48%)
Query: 283 PGRTFPVEVLYTKEPETDYLDASLITVMQIHLREPPGDVLLFLTG 327
P + L KE + ++A L + +++ PG VL+FL G
Sbjct: 620 PETKLSMSQLNEKETPFELIEALLKYIETLNV---PGAVLVFLPG 661
>WB|WBGene00015525 [details] [associations]
symbol:rha-2 species:6239 "Caenorhabditis elegans"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0040007 "growth" evidence=IMP] [GO:0002119
"nematode larval development" evidence=IMP] [GO:0040010 "positive
regulation of growth rate" evidence=IMP] [GO:0009792 "embryo
development ending in birth or egg hatching" evidence=IMP]
[GO:0000003 "reproduction" evidence=IMP] [GO:0008340 "determination
of adult lifespan" evidence=IMP] [GO:0016246 "RNA interference"
evidence=IMP] [GO:0006898 "receptor-mediated endocytosis"
evidence=IMP] [GO:0071688 "striated muscle myosin thick filament
assembly" evidence=IMP] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 GO:GO:0005524 GO:GO:0008340 GO:GO:0009792
GO:GO:0006898 GO:GO:0040007 GO:GO:0040010 GO:GO:0002119
GO:GO:0016246 GO:GO:0071688 GO:GO:0000003 GO:GO:0003723
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
GeneTree:ENSGT00550000074985 HOGENOM:HOG000201240 KO:K14780
OMA:AKLQPRT EMBL:FO080280 PIR:H88533 RefSeq:NP_498895.1
UniGene:Cel.10874 ProteinModelPortal:P34305 SMR:P34305
IntAct:P34305 STRING:P34305 PaxDb:P34305 EnsemblMetazoa:C06E1.10
GeneID:176207 KEGG:cel:CELE_C06E1.10 UCSC:C06E1.10 CTD:176207
WormBase:C06E1.10 InParanoid:P34305 NextBio:891582 Uniprot:P34305
Length = 1148
Score = 137 (53.3 bits), Expect = 1.3e-12, Sum P(2) = 1.3e-12
Identities = 28/54 (51%), Positives = 35/54 (64%)
Query: 488 DVPELIILPVYSALPSEMQTRIFEAAPPGSRKVVIATNIAETSLTIDGIFYVVD 541
D L LP+YS L Q R+F+ P G R VI+TN+AETSLTI G+ YV+D
Sbjct: 571 DCEPLYCLPLYSLLSMGKQRRVFDETPAGMRLCVISTNVAETSLTIPGVKYVID 624
Score = 133 (51.9 bits), Expect = 3.5e-12, Sum P(2) = 3.5e-12
Identities = 32/97 (32%), Positives = 54/97 (55%)
Query: 366 RNAAKKDPQEG-YRTLVDSQVVYIHPSSALFNRQPEWVIYHELVQTT-KEYMREVTSIDP 423
R+ +++ Q+G Y T + V+I P S +F +PE+VIY ELVQ K+ M V ++D
Sbjct: 921 RSVGQEEVQKGAYETTLIKGHVFIDPCSVVFTEEPEFVIYQELVQVNEKKLMTSVCAVDK 980
Query: 424 KWLVEFAPAFFKFSDPTKLSKFKKNQRLEPLYNKYEE 460
+WL A ++ + + K NQ EP+Y+ ++
Sbjct: 981 EWLSRLAESYCNYGEQDK------NQ--EPIYDPVKD 1009
Score = 133 (51.9 bits), Expect = 6.8e-06, Sum P(2) = 6.8e-06
Identities = 30/101 (29%), Positives = 56/101 (55%)
Query: 145 RNAAKKDPQEG-YRTLVDSQVVYIHPSSALFNRQPEWVIYHELVQTT-KEYMREVTSIDP 202
R+ +++ Q+G Y T + V+I P S +F +PE+VIY ELVQ K+ M V ++D
Sbjct: 921 RSVGQEEVQKGAYETTLIKGHVFIDPCSVVFTEEPEFVIYQELVQVNEKKLMTSVCAVDK 980
Query: 203 KWLVEFAPAFFKFSDPTKLSKFKKNQRLEPLQRTNRISFPP 243
+WL A ++ + + K + + + + +T +++F P
Sbjct: 981 EWLSRLAESYCNYGEQDKNQEPIYDPVKDMVVKTVKVTFGP 1021
Score = 119 (46.9 bits), Expect = 1.3e-12, Sum P(2) = 1.3e-12
Identities = 32/104 (30%), Positives = 55/104 (52%)
Query: 253 RPEIKLIVTSATLDAVKFS-SYFFE--AP-IFTIPGRTFPVEVLYTKEPETDYLDASLIT 308
RP ++L++ SATL F+ F P + + R FPV V + K DY+ ++
Sbjct: 383 RP-LRLVIMSATLRLDDFTHKKLFPLLTPKVIKVDARQFPVSVHFEKRTPDDYIASAFRK 441
Query: 309 VMQIHLREPPGDVLLFLTGKLDVRKQLLGIMDRHKLDVVSAGKN 352
+IH PPG +L+F+TG+ +V++ + + R+ + V KN
Sbjct: 442 TCRIHETLPPGAILVFVTGQHEVKQLITKLKKRYPV-VYETDKN 484
Score = 58 (25.5 bits), Expect = 6.8e-06, Sum P(2) = 6.8e-06
Identities = 12/43 (27%), Positives = 25/43 (58%)
Query: 6 VTPISQ-MAEFPLEPNLSKMLIMSVHLQCSDEVLTIVSMLSVQ 47
+T + + +A FPL P+ +K + M+ + ++S+LSV+
Sbjct: 747 ITKLGKTLAVFPLAPSYAKFIAMADQHNLMSHAILLISLLSVR 789
Score = 54 (24.1 bits), Expect = 1.7e-05, Sum P(2) = 1.7e-05
Identities = 30/117 (25%), Positives = 54/117 (46%)
Query: 212 FFKFSDPTKLSKFKKNQRLEPLQRTNRI---SFP-PGLLKQAVKKRPEIKLIVTSATLDA 267
F KF+DP LSK +Q + L+ N + +FP P + + + E +L A ++
Sbjct: 679 FVKFADPEILSK-PADQLVLHLKSMNIVKVVNFPFPSAPDEQMLESAEKRLCRLGALSES 737
Query: 268 VKFSSYFFEAPIFTIPGRT---FPVEVLYTK----EPETDYLDASLITVMQIHLREP 317
K EA I + G+T FP+ Y K + + + +++ + + +REP
Sbjct: 738 TKNGKT--EARITKL-GKTLAVFPLAPSYAKFIAMADQHNLMSHAILLISLLSVREP 791
Score = 41 (19.5 bits), Expect = 0.00037, Sum P(2) = 0.00037
Identities = 23/124 (18%), Positives = 49/124 (39%)
Query: 12 MAEFPLEPNLSKMLIMSVHLQCSDEVLTIVSMLSVQNVFYRPXXXXXXXXXXXXXF--NQ 69
+A FPL P+ +K + M+ + ++S+LSV+ N
Sbjct: 754 LAVFPLAPSYAKFIAMADQHNLMSHAILLISLLSVREPLIPVSSLRGDTPEETKELMKNV 813
Query: 70 ME--------------GDHITLLAVYNSWRNNKFSNAWCYENFVQIRTLKRAQDVRKQLL 115
++ GD L+ + K++ C + ++++ L A+ +R+QL
Sbjct: 814 LKERRRWCSHTGARRLGDLKVLMHAASVAEQIKYNARECEKVGLRVKALVEARKLRQQLT 873
Query: 116 GIMD 119
I++
Sbjct: 874 NIVN 877
Score = 40 (19.1 bits), Expect = 0.00018, Sum P(2) = 0.00018
Identities = 10/30 (33%), Positives = 18/30 (60%)
Query: 234 QRTNRI--SFPPGLLKQAVKKRPEIKLIVT 261
++T RI + PPG + V + E+K ++T
Sbjct: 440 RKTCRIHETLPPGAILVFVTGQHEVKQLIT 469
>UNIPROTKB|G5E5N3 [details] [associations]
symbol:DHX9 "ATP-dependent RNA helicase A" species:9913
"Bos taurus" [GO:0070937 "CRD-mediated mRNA stability complex"
evidence=IEA] [GO:0070934 "CRD-mediated mRNA stabilization"
evidence=IEA] [GO:0034605 "cellular response to heat" evidence=IEA]
[GO:0030529 "ribonucleoprotein complex" evidence=IEA] [GO:0007623
"circadian rhythm" evidence=IEA] [GO:0005813 "centrosome"
evidence=IEA] [GO:0005730 "nucleolus" evidence=IEA] [GO:0001085
"RNA polymerase II transcription factor binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0003725 "double-stranded RNA
binding" evidence=IEA] InterPro:IPR001159 InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00035 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS50137 PROSITE:PS51194 SMART:SM00358 SMART:SM00490
SMART:SM00847 InterPro:IPR014720 GO:GO:0005524 GO:GO:0005813
GO:GO:0034605 GO:GO:0005730 Gene3D:3.30.160.20 GO:GO:0030529
GO:GO:0003725 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
GeneTree:ENSGT00550000074257 UniGene:Bt.5544 GO:GO:0070937
OMA:DDWIRLQ GO:GO:0070934 EMBL:DAAA02043563 EMBL:DAAA02043564
Ensembl:ENSBTAT00000026409 Uniprot:G5E5N3
Length = 1287
Score = 138 (53.6 bits), Expect = 1.5e-12, Sum P(3) = 1.5e-12
Identities = 25/60 (41%), Positives = 41/60 (68%)
Query: 494 ILPVYSALPSEMQTRIFEAAPPGSRKVVIATNIAETSLTIDGIFYVVDPFDIEVRQAKYH 553
ILP++S +P E Q ++F+ P G K++++TNIAETS+TI+ + YV+D +V+ H
Sbjct: 680 ILPLHSQIPREEQRKVFDPVPSGVTKIILSTNIAETSITINDVVYVIDSCKQKVKLFTAH 739
Score = 120 (47.3 bits), Expect = 1.5e-12, Sum P(3) = 1.5e-12
Identities = 20/52 (38%), Positives = 34/52 (65%)
Query: 245 LLKQAVKKRPEIKLIVTSATLDAVKFSSYFFEAPIFTIPGRTFPVEVLYTKE 296
+L+ V+ PE+++++ SAT+D F YFF PI + GRTFPV+ + ++
Sbjct: 523 VLRDVVQAYPEVRIVLMSATIDTSMFCEYFFNCPIIEVYGRTFPVQEYFLED 574
Score = 44 (20.5 bits), Expect = 1.5e-12, Sum P(3) = 1.5e-12
Identities = 12/36 (33%), Positives = 21/36 (58%)
Query: 292 LYTKEPETDYLDASLITVMQIHLREPPGDVLLFLTG 327
L KE + ++A L+ + +++ PG VL+FL G
Sbjct: 624 LNEKETPFELIEALLLYIETLNV---PGAVLVFLPG 656
>UNIPROTKB|Q28141 [details] [associations]
symbol:DHX9 "ATP-dependent RNA helicase A" species:9913
"Bos taurus" [GO:0070937 "CRD-mediated mRNA stability complex"
evidence=ISS] [GO:0030529 "ribonucleoprotein complex" evidence=ISS]
[GO:0005730 "nucleolus" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0003725
"double-stranded RNA binding" evidence=IEA] InterPro:IPR001159
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00035 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS50137 PROSITE:PS51194
SMART:SM00358 SMART:SM00490 SMART:SM00847 InterPro:IPR014720
GO:GO:0005524 GO:GO:0005730 GO:GO:0003677 Gene3D:3.30.160.20
GO:GO:0030529 GO:GO:0003725 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 HOGENOM:HOG000247063 EMBL:X82829 IPI:IPI00714708
PIR:I46032 RefSeq:NP_776461.1 UniGene:Bt.5544
ProteinModelPortal:Q28141 SMR:Q28141 STRING:Q28141 PRIDE:Q28141
GeneID:281115 KEGG:bta:281115 CTD:1660 HOVERGEN:HBG039429
InParanoid:Q28141 KO:K13184 OrthoDB:EOG4HHP1J NextBio:20805185
GO:GO:0070937 Uniprot:Q28141
Length = 1287
Score = 138 (53.6 bits), Expect = 1.5e-12, Sum P(3) = 1.5e-12
Identities = 25/60 (41%), Positives = 41/60 (68%)
Query: 494 ILPVYSALPSEMQTRIFEAAPPGSRKVVIATNIAETSLTIDGIFYVVDPFDIEVRQAKYH 553
ILP++S +P E Q ++F+ P G K++++TNIAETS+TI+ + YV+D +V+ H
Sbjct: 680 ILPLHSQIPREEQRKVFDPVPSGVTKIILSTNIAETSITINDVVYVIDSCKQKVKLFTAH 739
Score = 120 (47.3 bits), Expect = 1.5e-12, Sum P(3) = 1.5e-12
Identities = 20/52 (38%), Positives = 34/52 (65%)
Query: 245 LLKQAVKKRPEIKLIVTSATLDAVKFSSYFFEAPIFTIPGRTFPVEVLYTKE 296
+L+ V+ PE+++++ SAT+D F YFF PI + GRTFPV+ + ++
Sbjct: 523 VLRDVVQAYPEVRIVLMSATIDTSMFCEYFFNCPIIEVYGRTFPVQEYFLED 574
Score = 44 (20.5 bits), Expect = 1.5e-12, Sum P(3) = 1.5e-12
Identities = 12/36 (33%), Positives = 21/36 (58%)
Query: 292 LYTKEPETDYLDASLITVMQIHLREPPGDVLLFLTG 327
L KE + ++A L+ + +++ PG VL+FL G
Sbjct: 624 LNEKETPFELIEALLLYIETLNV---PGAVLVFLPG 656
>FB|FBgn0002774 [details] [associations]
symbol:mle "maleless" species:7227 "Drosophila melanogaster"
[GO:0005700 "polytene chromosome" evidence=IDA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA;TAS] [GO:0003682
"chromatin binding" evidence=IDA] [GO:0000785 "chromatin"
evidence=IDA] [GO:0007549 "dosage compensation"
evidence=NAS;IMP;TAS] [GO:0009047 "dosage compensation by
hyperactivation of X chromosome" evidence=NAS] [GO:0045433 "male
courtship behavior, veined wing generated song production"
evidence=IGI] [GO:0016456 "X chromosome located dosage compensation
complex, transcription activating" evidence=NAS;TAS] [GO:0005694
"chromosome" evidence=NAS] [GO:0005634 "nucleus" evidence=IDA;NAS]
[GO:0003725 "double-stranded RNA binding" evidence=IEA;ISS]
[GO:0004386 "helicase activity" evidence=ISS] [GO:0016457 "dosage
compensation complex assembly involved in dosage compensation by
hyperactivation of X chromosome" evidence=TAS] [GO:0003724 "RNA
helicase activity" evidence=NAS] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0048675 "axon extension" evidence=IMP]
[GO:0008340 "determination of adult lifespan" evidence=IMP]
[GO:0000805 "X chromosome" evidence=IDA] [GO:0045944 "positive
regulation of transcription from RNA polymerase II promoter"
evidence=IMP] [GO:0005665 "DNA-directed RNA polymerase II, core
complex" evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA]
InterPro:IPR001159 InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00035 Pfam:PF00270
Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690 PROSITE:PS50137
PROSITE:PS51194 SMART:SM00358 SMART:SM00490 SMART:SM00847
InterPro:IPR014720 EMBL:AE013599 GO:GO:0005524 GO:GO:0008340
Gene3D:3.30.160.20 GO:GO:0045944 GO:GO:0000785 GO:GO:0003682
GO:GO:0003725 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0045433 eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 GO:GO:0048675 GO:GO:0003724
GeneTree:ENSGT00550000074257 KO:K13184 OMA:DDWIRLQ GO:GO:0016456
EMBL:M74121 EMBL:BT003785 EMBL:BT010267 PIR:B40025
RefSeq:NP_476641.1 RefSeq:NP_724440.1 UniGene:Dm.2901
ProteinModelPortal:P24785 SMR:P24785 IntAct:P24785 MINT:MINT-768581
STRING:P24785 PaxDb:P24785 PRIDE:P24785 EnsemblMetazoa:FBtr0086031
GeneID:35523 KEGG:dme:Dmel_CG11680 CTD:35523 FlyBase:FBgn0002774
InParanoid:P24785 OrthoDB:EOG47H44V PhylomeDB:P24785
GenomeRNAi:35523 NextBio:793836 Bgee:P24785 GermOnline:CG11680
GO:GO:0016457 Uniprot:P24785
Length = 1293
Score = 140 (54.3 bits), Expect = 1.9e-12, Sum P(3) = 1.9e-12
Identities = 25/54 (46%), Positives = 38/54 (70%)
Query: 488 DVPELIILPVYSALPSEMQTRIFEAAPPGSRKVVIATNIAETSLTIDGIFYVVD 541
D + ILP +S +P + Q ++FE P G K++++TNIAETS+TID I +V+D
Sbjct: 681 DTSQYQILPCHSQIPRDEQRKVFEPVPEGVTKIILSTNIAETSITIDDIVFVID 734
Score = 119 (46.9 bits), Expect = 1.9e-12, Sum P(3) = 1.9e-12
Identities = 22/63 (34%), Positives = 39/63 (61%)
Query: 245 LLKQAVKKRPEIKLIVTSATLDAVKFSSYFFEAPIFTIPGRTFPVEVLYTKE--PETDYL 302
+L+ V P++ +I+ SAT+D KFS YF P+ +PGR FPV+ + ++ TD++
Sbjct: 522 ILRDMVDTYPDLHVILMSATIDTTKFSKYFGICPVLEVPGRAFPVQQFFLEDIIQMTDFV 581
Query: 303 DAS 305
++
Sbjct: 582 PSA 584
Score = 42 (19.8 bits), Expect = 1.9e-12, Sum P(3) = 1.9e-12
Identities = 10/32 (31%), Positives = 19/32 (59%)
Query: 298 ETDYLDASLITVMQIHLREP--PGDVLLFLTG 327
E+D + L+ + +H++ PG +L+FL G
Sbjct: 632 ESD-VSFELLEALLMHIKSKNIPGAILVFLPG 662
>RGD|2318361 [details] [associations]
symbol:Dhx29 "DEAH (Asp-Glu-Ala-His) box polypeptide 29"
species:10116 "Rattus norvegicus" [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005739 "mitochondrion" evidence=ISO] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 RGD:2318361
GO:GO:0005739 GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 OrthoDB:EOG43FGW2 GeneTree:ENSGT00550000074257
IPI:IPI00372028 Ensembl:ENSRNOT00000013854 Uniprot:D3ZHW0
Length = 1366
Score = 134 (52.2 bits), Expect = 2.0e-12, Sum P(2) = 2.0e-12
Identities = 28/71 (39%), Positives = 48/71 (67%)
Query: 234 QRTNRISFPPGLLKQAVKKRPEIKLIVTSATLDAVKFSSYFFEAPIFTIPGRTFPVEVLY 293
+R+ + F +LK+ ++KR ++ LI+ SAT+D+ KFS+YF PI I GR++PVEV +
Sbjct: 706 ERSVQSDFLLVILKEILQKRSDLHLILMSATVDSDKFSTYFTHCPILRISGRSYPVEVFH 765
Query: 294 TKE--PETDYL 302
++ ET ++
Sbjct: 766 LEDIVEETGFI 776
Score = 122 (48.0 bits), Expect = 2.0e-12, Sum P(2) = 2.0e-12
Identities = 24/60 (40%), Positives = 38/60 (63%)
Query: 494 ILPVYSALPSEMQTRIFEAAPPGSRKVVIATNIAETSLTIDGIFYVVDPFDIEVRQAKYH 553
++ ++S L ++ Q F PPG RK+V+ATNIAET +TI + +V+D ++ KYH
Sbjct: 900 LIALHSVLSTQDQAAAFMLPPPGVRKIVLATNIAETGITIPDVVFVIDTG--RTKENKYH 957
Score = 118 (46.6 bits), Expect = 1.9e-05, Sum P(2) = 1.9e-05
Identities = 27/120 (22%), Positives = 57/120 (47%)
Query: 6 VTPISQ-MAEFPLEPNLSKMLIMSVHLQCSDEVLTIVSMLSVQNVFYRPXXXXXXXXXXX 64
+TP+ Q +A P+ + KMLI C + V T+ ++++ ++ F P
Sbjct: 1066 LTPLGQHLAALPVNVKIGKMLIFGAIFGCLEPVATLAAVMTEKSPFITPIGRKDEADLAK 1125
Query: 65 XXFNQMEGDHITLLAVYNSWRNNK----FSN--AWCYENFVQIRTLKRAQDVRKQLLGIM 118
+ DH+T+ Y W+ + F + ++C NF+ +L +DV+++L+ ++
Sbjct: 1126 SSLAVADSDHLTIYNAYLGWKKAQQEGGFRSEISYCQRNFLNRTSLLTLEDVKQELMKLV 1185
Score = 71 (30.1 bits), Expect = 3.7e-07, Sum P(2) = 3.7e-07
Identities = 15/37 (40%), Positives = 22/37 (59%)
Query: 388 IHPSSALFNRQPE-WVIYHELVQTTKEYMREVTSIDP 423
+HPSS + Q W++Y E V+ + Y+RE T I P
Sbjct: 1253 VHPSSVNRDLQTYGWLLYQEKVRYARVYLRETTLITP 1289
Score = 71 (30.1 bits), Expect = 1.9e-05, Sum P(2) = 1.9e-05
Identities = 15/37 (40%), Positives = 22/37 (59%)
Query: 167 IHPSSALFNRQPE-WVIYHELVQTTKEYMREVTSIDP 202
+HPSS + Q W++Y E V+ + Y+RE T I P
Sbjct: 1253 VHPSSVNRDLQTYGWLLYQEKVRYARVYLRETTLITP 1289
>UNIPROTKB|E2RID8 [details] [associations]
symbol:DHX29 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026 CTD:54505
GeneTree:ENSGT00550000074257 EMBL:AAEX03001437 RefSeq:XP_535238.2
Ensembl:ENSCAFT00000010821 GeneID:478060 KEGG:cfa:478060
NextBio:20853441 Uniprot:E2RID8
Length = 1367
Score = 133 (51.9 bits), Expect = 2.0e-12, Sum P(2) = 2.0e-12
Identities = 26/60 (43%), Positives = 43/60 (71%)
Query: 245 LLKQAVKKRPEIKLIVTSATLDAVKFSSYFFEAPIFTIPGRTFPVEVLYTKE--PETDYL 302
+LK+ ++KR ++ LI+ SAT+D+ KFS+YF PI I GR++PVEV + ++ ET ++
Sbjct: 714 ILKEILQKRSDLHLILMSATVDSEKFSTYFTHCPILRISGRSYPVEVFHLEDIVEETGFV 773
Score = 124 (48.7 bits), Expect = 1.3e-06, Sum P(2) = 1.3e-06
Identities = 28/120 (23%), Positives = 55/120 (45%)
Query: 6 VTPISQ-MAEFPLEPNLSKMLIMSVHLQCSDEVLTIVSMLSVQNVFYRPXXXXXXXXXXX 64
+TP+ Q +A P+ + KMLI C D V T+ ++++ ++ F P
Sbjct: 1063 LTPLGQHLAALPVNVKIGKMLIFGAIFGCLDPVATLAAVMTEKSPFTTPIGRKDEADLAK 1122
Query: 65 XXFNQMEGDHITLLAVYNSWRNNKFSN------AWCYENFVQIRTLKRAQDVRKQLLGIM 118
+ DH+T+ Y W+ + A+C NF+ +L +DV+++L+ ++
Sbjct: 1123 SALAMADSDHLTIYNAYLGWKKARQEGGYRSEIAYCRRNFLNRTSLLTLEDVKQELMKLV 1182
Score = 123 (48.4 bits), Expect = 2.0e-12, Sum P(2) = 2.0e-12
Identities = 24/60 (40%), Positives = 38/60 (63%)
Query: 494 ILPVYSALPSEMQTRIFEAAPPGSRKVVIATNIAETSLTIDGIFYVVDPFDIEVRQAKYH 553
++ ++S L ++ Q F PPG RK+V+ATNIAET +TI + +V+D ++ KYH
Sbjct: 897 VIALHSILSTQDQAAAFTLPPPGVRKIVLATNIAETGITIPDVVFVIDTG--RTKENKYH 954
Score = 76 (31.8 bits), Expect = 1.4e-07, Sum P(2) = 1.4e-07
Identities = 16/37 (43%), Positives = 23/37 (62%)
Query: 388 IHPSSALFNRQPE-WVIYHELVQTTKEYMREVTSIDP 423
+HPSS + Q W++Y E V+ T+ Y+RE T I P
Sbjct: 1253 VHPSSVNRDLQTYGWLLYQEKVRYTRVYLRETTLITP 1289
Score = 76 (31.8 bits), Expect = 1.3e-06, Sum P(2) = 1.3e-06
Identities = 16/37 (43%), Positives = 23/37 (62%)
Query: 167 IHPSSALFNRQPE-WVIYHELVQTTKEYMREVTSIDP 202
+HPSS + Q W++Y E V+ T+ Y+RE T I P
Sbjct: 1253 VHPSSVNRDLQTYGWLLYQEKVRYTRVYLRETTLITP 1289
>UNIPROTKB|J9P6V4 [details] [associations]
symbol:DHX29 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026 OMA:WLLYQEK
GeneTree:ENSGT00550000074257 EMBL:AAEX03001437
Ensembl:ENSCAFT00000043416 Uniprot:J9P6V4
Length = 1369
Score = 133 (51.9 bits), Expect = 2.0e-12, Sum P(2) = 2.0e-12
Identities = 26/60 (43%), Positives = 43/60 (71%)
Query: 245 LLKQAVKKRPEIKLIVTSATLDAVKFSSYFFEAPIFTIPGRTFPVEVLYTKE--PETDYL 302
+LK+ ++KR ++ LI+ SAT+D+ KFS+YF PI I GR++PVEV + ++ ET ++
Sbjct: 714 ILKEILQKRSDLHLILMSATVDSEKFSTYFTHCPILRISGRSYPVEVFHLEDIVEETGFV 773
Score = 124 (48.7 bits), Expect = 1.3e-06, Sum P(2) = 1.3e-06
Identities = 28/120 (23%), Positives = 55/120 (45%)
Query: 6 VTPISQ-MAEFPLEPNLSKMLIMSVHLQCSDEVLTIVSMLSVQNVFYRPXXXXXXXXXXX 64
+TP+ Q +A P+ + KMLI C D V T+ ++++ ++ F P
Sbjct: 1066 LTPLGQHLAALPVNVKIGKMLIFGAIFGCLDPVATLAAVMTEKSPFTTPIGRKDEADLAK 1125
Query: 65 XXFNQMEGDHITLLAVYNSWRNNKFSN------AWCYENFVQIRTLKRAQDVRKQLLGIM 118
+ DH+T+ Y W+ + A+C NF+ +L +DV+++L+ ++
Sbjct: 1126 SALAMADSDHLTIYNAYLGWKKARQEGGYRSEIAYCRRNFLNRTSLLTLEDVKQELMKLV 1185
Score = 123 (48.4 bits), Expect = 2.0e-12, Sum P(2) = 2.0e-12
Identities = 24/60 (40%), Positives = 38/60 (63%)
Query: 494 ILPVYSALPSEMQTRIFEAAPPGSRKVVIATNIAETSLTIDGIFYVVDPFDIEVRQAKYH 553
++ ++S L ++ Q F PPG RK+V+ATNIAET +TI + +V+D ++ KYH
Sbjct: 900 VIALHSILSTQDQAAAFTLPPPGVRKIVLATNIAETGITIPDVVFVIDTG--RTKENKYH 957
Score = 76 (31.8 bits), Expect = 1.4e-07, Sum P(2) = 1.4e-07
Identities = 16/37 (43%), Positives = 23/37 (62%)
Query: 388 IHPSSALFNRQPE-WVIYHELVQTTKEYMREVTSIDP 423
+HPSS + Q W++Y E V+ T+ Y+RE T I P
Sbjct: 1256 VHPSSVNRDLQTYGWLLYQEKVRYTRVYLRETTLITP 1292
Score = 76 (31.8 bits), Expect = 1.3e-06, Sum P(2) = 1.3e-06
Identities = 16/37 (43%), Positives = 23/37 (62%)
Query: 167 IHPSSALFNRQPE-WVIYHELVQTTKEYMREVTSIDP 202
+HPSS + Q W++Y E V+ T+ Y+RE T I P
Sbjct: 1256 VHPSSVNRDLQTYGWLLYQEKVRYTRVYLRETTLITP 1292
>UNIPROTKB|Q7Z478 [details] [associations]
symbol:DHX29 "ATP-dependent RNA helicase DHX29"
species:9606 "Homo sapiens" [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0003743 "translation initiation factor
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005739 "mitochondrion" evidence=IEA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005739
GO:GO:0005524 GO:GO:0003743 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 EMBL:AY036974 EMBL:BC056219 EMBL:AL834496
EMBL:BX648101 EMBL:BX648269 EMBL:AL079292 EMBL:AF070639
IPI:IPI00217413 RefSeq:NP_061903.2 UniGene:Hs.740463
ProteinModelPortal:Q7Z478 SMR:Q7Z478 IntAct:Q7Z478
MINT:MINT-1376685 STRING:Q7Z478 PhosphoSite:Q7Z478 DMDM:110278938
PaxDb:Q7Z478 PeptideAtlas:Q7Z478 PRIDE:Q7Z478
Ensembl:ENST00000251636 GeneID:54505 KEGG:hsa:54505 UCSC:uc003jpx.3
CTD:54505 GeneCards:GC05M054552 H-InvDB:HIX0004866 HGNC:HGNC:15815
HPA:HPA038317 HPA:HPA038318 MIM:612720 neXtProt:NX_Q7Z478
PharmGKB:PA27215 HOGENOM:HOG000247063 HOVERGEN:HBG081436
InParanoid:Q7Z478 OMA:WLLYQEK OrthoDB:EOG43FGW2 PhylomeDB:Q7Z478
ChiTaRS:DHX29 GenomeRNAi:54505 NextBio:56869 Bgee:Q7Z478
CleanEx:HS_DHX29 Genevestigator:Q7Z478 GermOnline:ENSG00000067248
Uniprot:Q7Z478
Length = 1369
Score = 133 (51.9 bits), Expect = 2.0e-12, Sum P(2) = 2.0e-12
Identities = 26/60 (43%), Positives = 43/60 (71%)
Query: 245 LLKQAVKKRPEIKLIVTSATLDAVKFSSYFFEAPIFTIPGRTFPVEVLYTKE--PETDYL 302
+LK+ ++KR ++ LI+ SAT+D+ KFS+YF PI I GR++PVEV + ++ ET ++
Sbjct: 717 ILKEILQKRSDLHLILMSATVDSEKFSTYFTHCPILRISGRSYPVEVFHLEDIIEETGFV 776
Score = 123 (48.4 bits), Expect = 2.0e-12, Sum P(2) = 2.0e-12
Identities = 24/60 (40%), Positives = 38/60 (63%)
Query: 494 ILPVYSALPSEMQTRIFEAAPPGSRKVVIATNIAETSLTIDGIFYVVDPFDIEVRQAKYH 553
++ ++S L ++ Q F PPG RK+V+ATNIAET +TI + +V+D ++ KYH
Sbjct: 900 VIALHSILSTQDQAAAFTLPPPGVRKIVLATNIAETGITIPDVVFVIDTG--RTKENKYH 957
Score = 120 (47.3 bits), Expect = 9.0e-06, Sum P(2) = 9.0e-06
Identities = 27/120 (22%), Positives = 54/120 (45%)
Query: 6 VTPISQ-MAEFPLEPNLSKMLIMSVHLQCSDEVLTIVSMLSVQNVFYRPXXXXXXXXXXX 64
+TP+ Q +A P+ + KMLI C D V T+ ++++ ++ F P
Sbjct: 1066 LTPLGQHLAALPVNVKIGKMLIFGAIFGCLDPVATLAAVMTEKSPFTTPIGRKDEADLAK 1125
Query: 65 XXFNQMEGDHITLLAVYNSWRNNKFSNAW------CYENFVQIRTLKRAQDVRKQLLGIM 118
+ DH+T+ Y W+ + + C NF+ +L +DV+++L+ ++
Sbjct: 1126 SALAMADSDHLTIYNAYLGWKKARQEGGYRSEITYCRRNFLNRTSLLTLEDVKQELIKLV 1185
Score = 72 (30.4 bits), Expect = 3.7e-07, Sum P(2) = 3.7e-07
Identities = 14/37 (37%), Positives = 22/37 (59%)
Query: 388 IHPSSALFNRQPE-WVIYHELVQTTKEYMREVTSIDP 423
+HPSS + Q W++Y E ++ + Y+RE T I P
Sbjct: 1256 VHPSSVNRDLQTHGWLLYQEKIRYARVYLRETTLITP 1292
Score = 72 (30.4 bits), Expect = 9.0e-06, Sum P(2) = 9.0e-06
Identities = 14/37 (37%), Positives = 22/37 (59%)
Query: 167 IHPSSALFNRQPE-WVIYHELVQTTKEYMREVTSIDP 202
+HPSS + Q W++Y E ++ + Y+RE T I P
Sbjct: 1256 VHPSSVNRDLQTHGWLLYQEKIRYARVYLRETTLITP 1292
>UNIPROTKB|J3KR71 [details] [associations]
symbol:DHX34 "Probable ATP-dependent RNA helicase DHX34"
species:9606 "Homo sapiens" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR001650 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 SMART:SM00490 SMART:SM00847
GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 EMBL:AC008754 HGNC:HGNC:16719
ChiTaRS:DHX34 ProteinModelPortal:J3KR71 Ensembl:ENST00000466298
Uniprot:J3KR71
Length = 576
Score = 126 (49.4 bits), Expect = 2.2e-12, Sum P(2) = 2.2e-12
Identities = 23/54 (42%), Positives = 36/54 (66%)
Query: 244 GLLKQAVKKRPEIKLIVTSATLDAVKFSSYFFEAPIFTIPGRTFPVEVLYTKEP 297
G+L++ + RP++K+I+ SAT++ FSSYF AP+ +PGR FP+ V P
Sbjct: 293 GVLQRLLPTRPDLKVILMSATINISLFSSYFSNAPVVQVPGRLFPITVFDVAPP 346
Score = 121 (47.7 bits), Expect = 2.2e-12, Sum P(2) = 2.2e-12
Identities = 22/33 (66%), Positives = 29/33 (87%)
Query: 509 IFEAAPPGSRKVVIATNIAETSLTIDGIFYVVD 541
+F+ APPG RK +++TNIAETS+TIDGI +VVD
Sbjct: 340 VFDVAPPGVRKCILSTNIAETSVTIDGIRFVVD 372
>MGI|MGI:2145374 [details] [associations]
symbol:Dhx29 "DEAH (Asp-Glu-Ala-His) box polypeptide 29"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0003743 "translation initiation factor activity" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0005739 "mitochondrion" evidence=IDA] [GO:0006412 "translation"
evidence=IEA] [GO:0006413 "translational initiation" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0008150 "biological_process" evidence=ND] [GO:0016787
"hydrolase activity" evidence=IEA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 MGI:MGI:2145374
GO:GO:0005739 GO:GO:0005524 GO:GO:0003743 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 CTD:54505 HOGENOM:HOG000247063
HOVERGEN:HBG081436 OMA:WLLYQEK OrthoDB:EOG43FGW2 EMBL:BC057112
EMBL:BC082319 EMBL:AK028342 EMBL:AK042066 EMBL:AK042497
EMBL:AK049530 IPI:IPI00410936 RefSeq:NP_766182.2 UniGene:Mm.35094
ProteinModelPortal:Q6PGC1 SMR:Q6PGC1 STRING:Q6PGC1
PhosphoSite:Q6PGC1 PaxDb:Q6PGC1 PRIDE:Q6PGC1
Ensembl:ENSMUST00000038574 GeneID:218629 KEGG:mmu:218629
UCSC:uc007rwx.1 GeneTree:ENSGT00550000074257 InParanoid:Q6PGC1
NextBio:376359 Bgee:Q6PGC1 CleanEx:MM_DHX29 Genevestigator:Q6PGC1
GermOnline:ENSMUSG00000042426 Uniprot:Q6PGC1
Length = 1365
Score = 133 (51.9 bits), Expect = 2.6e-12, Sum P(2) = 2.6e-12
Identities = 28/71 (39%), Positives = 48/71 (67%)
Query: 234 QRTNRISFPPGLLKQAVKKRPEIKLIVTSATLDAVKFSSYFFEAPIFTIPGRTFPVEVLY 293
+R+ + F +LK+ ++KR ++ LI+ SAT+D+ KFS+YF PI I GR++PVEV +
Sbjct: 705 ERSVQSDFLLVILKEILQKRSDLHLILMSATVDSDKFSTYFTHCPILRISGRSYPVEVFH 764
Query: 294 TKE--PETDYL 302
++ ET ++
Sbjct: 765 LEDIVEETGFV 775
Score = 122 (48.0 bits), Expect = 2.6e-12, Sum P(2) = 2.6e-12
Identities = 24/60 (40%), Positives = 38/60 (63%)
Query: 494 ILPVYSALPSEMQTRIFEAAPPGSRKVVIATNIAETSLTIDGIFYVVDPFDIEVRQAKYH 553
++ ++S L ++ Q F PPG RK+V+ATNIAET +TI + +V+D ++ KYH
Sbjct: 899 VIALHSVLSTQDQAAAFMFPPPGVRKIVLATNIAETGITIPDVVFVIDTG--RTKENKYH 956
Score = 118 (46.6 bits), Expect = 5.7e-06, Sum P(2) = 5.7e-06
Identities = 27/120 (22%), Positives = 57/120 (47%)
Query: 6 VTPISQ-MAEFPLEPNLSKMLIMSVHLQCSDEVLTIVSMLSVQNVFYRPXXXXXXXXXXX 64
+TP+ Q +A P+ + KMLI C + V T+ ++++ ++ F P
Sbjct: 1065 LTPLGQHLAALPVNVKIGKMLIFGAIFGCLEPVATLAAVMTEKSPFITPIGRKDEADLAK 1124
Query: 65 XXFNQMEGDHITLLAVYNSWRNNK----FSN--AWCYENFVQIRTLKRAQDVRKQLLGIM 118
+ DH+T+ Y W+ + F + ++C NF+ +L +DV+++L+ ++
Sbjct: 1125 SSLAVADSDHLTIYNAYLGWKKAQQEGGFRSEISYCQRNFLNRTSLLTLEDVKQELMKLV 1184
Score = 76 (31.8 bits), Expect = 8.5e-08, Sum P(3) = 8.5e-08
Identities = 16/37 (43%), Positives = 23/37 (62%)
Query: 388 IHPSSALFNRQPE-WVIYHELVQTTKEYMREVTSIDP 423
+HPSS + Q W++Y E V+ T+ Y+RE T I P
Sbjct: 1252 VHPSSVNRDLQTYGWLLYQEKVRYTRVYLRETTLITP 1288
Score = 76 (31.8 bits), Expect = 5.7e-06, Sum P(2) = 5.7e-06
Identities = 16/37 (43%), Positives = 23/37 (62%)
Query: 167 IHPSSALFNRQPE-WVIYHELVQTTKEYMREVTSIDP 202
+HPSS + Q W++Y E V+ T+ Y+RE T I P
Sbjct: 1252 VHPSSVNRDLQTYGWLLYQEKVRYTRVYLRETTLITP 1288
Score = 47 (21.6 bits), Expect = 8.5e-08, Sum P(3) = 8.5e-08
Identities = 18/65 (27%), Positives = 31/65 (47%)
Query: 292 LYTKEPETDYLDASLITVMQIHLREPPGDVLLFLTGKLDVRKQLLG-IMDRHKLDVVSAG 350
LYT+E +LD S+ ++++ L E L + L + L +D +L V+S
Sbjct: 992 LYTRERFEGFLDYSVPEILRVPLEEL---CLHIMKCDLGSPEDFLSKALDPPQLQVISNA 1048
Query: 351 KNTVR 355
N +R
Sbjct: 1049 MNLLR 1053
>ZFIN|ZDB-GENE-050419-20 [details] [associations]
symbol:si:dkey-119o24.1 "si:dkey-119o24.1"
species:7955 "Danio rerio" [GO:0004386 "helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0003676
"nucleic acid binding" evidence=IEA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0016787 "hydrolase activity"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
InterPro:IPR001650 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS51194
SMART:SM00490 SMART:SM00847 ZFIN:ZDB-GENE-050419-20 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
HOGENOM:HOG000247063 GeneTree:ENSGT00550000074257
HOVERGEN:HBG081438 KO:K14442 OrthoDB:EOG4K6G3J OMA:GRIAYND
EMBL:BX908763 EMBL:BX927166 IPI:IPI00633899 RefSeq:NP_001122016.1
UniGene:Dr.130296 Ensembl:ENSDART00000109467 GeneID:569072
KEGG:dre:569072 InParanoid:A3KQN8 NextBio:20889491 Uniprot:A3KQN8
Length = 1037
Score = 156 (60.0 bits), Expect = 5.2e-10, Sum P(2) = 5.2e-10
Identities = 44/163 (26%), Positives = 79/163 (48%)
Query: 6 VTPIS-QMAEFPLEPNLSKMLIMSVHLQCSDEVLTIVSMLSVQNVFYRPXXXXXXXXXXX 64
+TP+ +A P+EP++ KM++ L C D VLTI + LS ++ F+ P
Sbjct: 709 LTPLGFHLARMPVEPHIGKMILFGALLGCLDPVLTIAASLSFKDPFFIPLGKEKIADQRR 768
Query: 65 XXFNQ-MEGDHITLLAVYNSWRNNK-----FSNAWCYENFVQIRTLKRAQDVRKQ----L 114
F+Q DH++++ + W + K F +C++NF+ TL+ Q+++ Q L
Sbjct: 769 KMFSQNSRSDHLSIVNAFLGWEDAKRQGSRFEREYCWDNFLSANTLQMLQNMKGQFAEHL 828
Query: 115 L--GIMD-RHKLDVVSA--GKNTVRVQKAVCSGFFRNAAKKDP 152
L G ++ + D S +N V+ + +G + AK P
Sbjct: 829 LRAGFVNSKDPKDPSSNINSENKKLVKAVIVAGLYPKVAKISP 871
Score = 142 (55.0 bits), Expect = 2.7e-12, Sum P(3) = 2.7e-12
Identities = 29/56 (51%), Positives = 41/56 (73%)
Query: 493 IILPVYSALPSEMQTRI-------FEAAPPGSRKVVIATNIAETSLTIDGIFYVVD 541
II+P++S +P+ QT++ F+ PPG RK+VIATNIAETS+TID + YV+D
Sbjct: 536 IIIPLHSLMPTVSQTQVISLFPQVFKKPPPGVRKIVIATNIAETSITIDDVVYVID 591
Score = 111 (44.1 bits), Expect = 2.7e-12, Sum P(3) = 2.7e-12
Identities = 21/45 (46%), Positives = 31/45 (68%)
Query: 245 LLKQAVKKRPEIKLIVTSATLDAVKFSSYFFEAPIFTIPGRTFPV 289
++K + R ++K+++ SATL+A KFS YF P+ IPG TFPV
Sbjct: 362 IVKDLLTARDDLKVVLMSATLNAEKFSKYFNNCPMIHIPGYTFPV 406
Score = 73 (30.8 bits), Expect = 5.2e-10, Sum P(2) = 5.2e-10
Identities = 23/90 (25%), Positives = 40/90 (44%)
Query: 351 KNTVRVQKAVCSGFFRNAAKKDPQEGYR--------TLVDSQVVYIHPSSALFNR---QP 399
+N V+ + +G + AK P + T D +V IHP S Q
Sbjct: 849 ENKKLVKAVIVAGLYPKVAKISPSHNKKRPMPVKVYTKADGKVC-IHPKSVNAEETQFQY 907
Query: 400 EWVIYHELVQTTKEYMREVTSIDPKWLVEF 429
+W++YH ++TT ++ + T + P L+ F
Sbjct: 908 KWLVYHLKMKTTSIFLYDCTEVSPFSLLFF 937
Score = 43 (20.2 bits), Expect = 2.7e-12, Sum P(3) = 2.7e-12
Identities = 13/41 (31%), Positives = 21/41 (51%)
Query: 289 VEVLYTKEPETDYLDASLITVMQIHL--REPPGDVLLFLTG 327
+EVL + + D +D L + H+ E G +L+FL G
Sbjct: 472 IEVLGMMDDD-DNIDLELTAALIRHIAVNENEGAILVFLPG 511
Score = 43 (20.2 bits), Expect = 2.0e-05, Sum P(2) = 2.0e-05
Identities = 14/51 (27%), Positives = 24/51 (47%)
Query: 432 AFFKFSDPTKLSKFKKNQRLEPLYNKYEEPNAWRIS-REEI-DTACEILYE 480
++F DP + ++EP K E+ R S +EE+ +T E L +
Sbjct: 135 SYFDGDDPVETQNIMPLPKVEPKDEKQEDAIKSRASLKEELNETNLEYLLQ 185
>UNIPROTKB|G4NBP1 [details] [associations]
symbol:MGG_00523 "Pre-mRNA-splicing factor ATP-dependent
RNA helicase PRP2" species:242507 "Magnaporthe oryzae 70-15"
[GO:0005575 "cellular_component" evidence=ND] [GO:0008150
"biological_process" evidence=ND] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 Pfam:PF00271 Pfam:PF04408
PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
GO:GO:0005524 EMBL:CM001235 GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 RefSeq:XP_003718533.1 EnsemblFungi:MGG_00523T0
GeneID:2674513 KEGG:mgr:MGG_00523 Uniprot:G4NBP1
Length = 803
Score = 145 (56.1 bits), Expect = 2.0e-06, P = 2.0e-06
Identities = 49/192 (25%), Positives = 88/192 (45%)
Query: 33 CSDEVLTIVSMLSV-QNVFYR--PXXXXXXXXXXXXXFNQMEGD---HITLLAVYNSWRN 86
C EV+ I+S +S ++F++ + EGD ++T + +Y +
Sbjct: 608 CLLEVIDIISCISGGDDIFHQLQSEEAREEVEEYRRELRRREGDLMVYLTTMQMYTA--E 665
Query: 87 NKFSNAWCYENFVQIRTLKRAQDVRKQLL------GIM-DRHKLD----VVSAGKNTVRV 135
N WC + + +RT+++A ++R+QL G++ ++ D V + + +
Sbjct: 666 NSDRTEWCKKRKINLRTMRQALNIRRQLRSLCVSEGMLTEKPPPDPQPFVPLSPEAAETI 725
Query: 136 QKAVCSGFFRNAAKKDPQEGYRTLVDSQVVYIHPSSALFNRQPEWVIYHELVQTTKEYMR 195
K GF + A P Y T VV IHPSS+L ++ E +++ E V T K Y +
Sbjct: 726 TKCFMKGFCTSTAMLAPDLSYVTSQGKHVVAIHPSSSLHGQKKEAIMFLEHVFTQKSYAK 785
Query: 196 EVTSIDPKWLVE 207
+V I W+ E
Sbjct: 786 KVAVIQSVWIPE 797
Score = 140 (54.3 bits), Expect = 4.6e-12, Sum P(2) = 4.6e-12
Identities = 31/82 (37%), Positives = 48/82 (58%)
Query: 468 REEIDTACEILYERMKSLGPDVPELIILPVYSALPSEMQTRIFEAAPPGSRKVVIATNIA 527
+E I+ ++ E +L DVP++ LP++ L E Q F RKVV+ATNIA
Sbjct: 389 QEPIEEIQRLIEEYAATLASDVPKIKALPLFGQLSMEAQHTAFRPLKGRVRKVVLATNIA 448
Query: 528 ETSLTIDGIFYVVDPFDIEVRQ 549
ETS+T+ G+ YV+D +++Q
Sbjct: 449 ETSVTVPGVRYVIDTGKSKMKQ 470
Score = 107 (42.7 bits), Expect = 4.6e-12, Sum P(2) = 4.6e-12
Identities = 22/48 (45%), Positives = 32/48 (66%)
Query: 282 IPGRTFPVEVLYTKEPETDYLDASLITVMQIHLREP-PGDVLLFLTGK 328
I GR FPVE++++ +P D + TV +IH EP PGD+L+FL G+
Sbjct: 342 IEGRQFPVEIIHSPKPVPVLADEVVKTVFKIHCGEPLPGDILVFLYGQ 389
Score = 106 (42.4 bits), Expect = 2.1e-08, Sum P(2) = 2.1e-08
Identities = 25/73 (34%), Positives = 36/73 (49%)
Query: 356 VQKAVCSGFFRNAAKKDPQEGYRTLVDSQVVYIHPSSALFNRQPEWVIYHELVQTTKEYM 415
+ K GF + A P Y T VV IHPSS+L ++ E +++ E V T K Y
Sbjct: 725 ITKCFMKGFCTSTAMLAPDLSYVTSQGKHVVAIHPSSSLHGQKKEAIMFLEHVFTQKSYA 784
Query: 416 REVTSIDPKWLVE 428
++V I W+ E
Sbjct: 785 KKVAVIQSVWIPE 797
>ZFIN|ZDB-GENE-030131-4078 [details] [associations]
symbol:dhx57 "DEAH (Asp-Glu-Ala-Asp/His) box
polypeptide 57" species:7955 "Danio rerio" [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0008270 "zinc
ion binding" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
InterPro:IPR000571 InterPro:IPR001650 InterPro:IPR006575
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF00642 Pfam:PF04408 Pfam:PF05773 PROSITE:PS50103
PROSITE:PS51194 SMART:SM00356 SMART:SM00490 SMART:SM00847
ZFIN:ZDB-GENE-030131-4078 GO:GO:0005524 GO:GO:0008270 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 GeneTree:ENSGT00550000074257
EMBL:BX248102 EMBL:AL935288 EMBL:CT998560 IPI:IPI00513320
Ensembl:ENSDART00000080351 ArrayExpress:F1QCB1 Bgee:F1QCB1
Uniprot:F1QCB1
Length = 1430
Score = 133 (51.9 bits), Expect = 4.9e-12, Sum P(4) = 4.9e-12
Identities = 28/63 (44%), Positives = 39/63 (61%)
Query: 234 QRTNRISFPPGLLKQAVKKRPEIKLIVTSATLDAVKFSSYFFEAPIFTIPGRTFPVEVLY 293
+RT F +LK + KR ++K+I+ SATL+A FS YF P IPGRTFPVE +
Sbjct: 711 ERTEESDFLLLVLKDLIVKRTDLKVIMMSATLNAELFSQYFNNCPCIHIPGRTFPVEQFF 770
Query: 294 TKE 296
++
Sbjct: 771 LED 773
Score = 130 (50.8 bits), Expect = 2.1e-07, Sum P(2) = 2.1e-07
Identities = 30/123 (24%), Positives = 56/123 (45%)
Query: 2 DSLVVTPIS-QMAEFPLEPNLSKMLIMSVHLQCSDEVLTIVSMLSVQNVFYRPXXXXXXX 60
D +TP+ +A P++ + K++++ +C D LTI + L+ ++ F P
Sbjct: 1091 DEESLTPLGWHLACLPVDVRIGKLMLLGAIFRCLDPALTIAASLAFKSPFVSPWDKREEA 1150
Query: 61 XXXXXXFNQMEGDHITLLAVYNSWRNN-----KFSNAWCYENFVQIRTLKRAQDVRKQLL 115
F+ DH+ L+ Y W N K +C ENF+ IR L+ +++Q
Sbjct: 1151 NEKKLAFSLANSDHLALMQAYKGWCNAAQSGFKAGYQYCRENFLSIRGLQEIACLKRQFA 1210
Query: 116 GIM 118
++
Sbjct: 1211 ELL 1213
Score = 122 (48.0 bits), Expect = 4.9e-12, Sum P(4) = 4.9e-12
Identities = 22/49 (44%), Positives = 35/49 (71%)
Query: 493 IILPVYSALPSEMQTRIFEAAPPGSRKVVIATNIAETSLTIDGIFYVVD 541
++ P++S+L +E Q +F G K++I+TNIAETS+TID + YV+D
Sbjct: 925 VVYPLHSSLSNEEQQAVFTRPQNGVTKIIISTNIAETSVTIDDVVYVID 973
Score = 78 (32.5 bits), Expect = 1.1e-07, Sum P(4) = 1.1e-07
Identities = 20/61 (32%), Positives = 37/61 (60%)
Query: 366 RNAAKKDPQ-EGYRTLVDSQ-VVYIHPSSALFN-RQPE--WVIYHELVQTTKEYMREVTS 420
+ A K P+ E R + S V+IHPSS F+ R + +++YHE V+T++ ++R+ +
Sbjct: 1284 KGAMKMQPKAEEQRFMTKSDGAVHIHPSSVNFSVRHYDSPYLVYHEKVKTSRVFIRDCSM 1343
Query: 421 I 421
+
Sbjct: 1344 V 1344
Score = 78 (32.5 bits), Expect = 2.1e-07, Sum P(2) = 2.1e-07
Identities = 20/61 (32%), Positives = 37/61 (60%)
Query: 145 RNAAKKDPQ-EGYRTLVDSQ-VVYIHPSSALFN-RQPE--WVIYHELVQTTKEYMREVTS 199
+ A K P+ E R + S V+IHPSS F+ R + +++YHE V+T++ ++R+ +
Sbjct: 1284 KGAMKMQPKAEEQRFMTKSDGAVHIHPSSVNFSVRHYDSPYLVYHEKVKTSRVFIRDCSM 1343
Query: 200 I 200
+
Sbjct: 1344 V 1344
Score = 49 (22.3 bits), Expect = 4.9e-12, Sum P(4) = 4.9e-12
Identities = 11/19 (57%), Positives = 14/19 (73%)
Query: 317 PPGDVLLFLTGKLDVRKQL 335
PPG VL+FL G ++ KQL
Sbjct: 889 PPGAVLVFLPGLAEI-KQL 906
Score = 37 (18.1 bits), Expect = 4.9e-12, Sum P(4) = 4.9e-12
Identities = 9/24 (37%), Positives = 13/24 (54%)
Query: 217 DPTKLSKFKKNQRLEPLQRTNRIS 240
D K S+F+ Q PLQ+ + S
Sbjct: 94 DEEKRSRFRSEQVPLPLQKIHMTS 117
>UNIPROTKB|E2RNT3 [details] [associations]
symbol:DHX9 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0070937 "CRD-mediated mRNA stability complex"
evidence=IEA] [GO:0070934 "CRD-mediated mRNA stabilization"
evidence=IEA] [GO:0034605 "cellular response to heat" evidence=IEA]
[GO:0030529 "ribonucleoprotein complex" evidence=IEA] [GO:0007623
"circadian rhythm" evidence=IEA] [GO:0005813 "centrosome"
evidence=IEA] [GO:0005730 "nucleolus" evidence=IEA] [GO:0001085
"RNA polymerase II transcription factor binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0003725 "double-stranded RNA
binding" evidence=IEA] InterPro:IPR001159 InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00035 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS50137 PROSITE:PS51194 SMART:SM00358 SMART:SM00490
SMART:SM00847 InterPro:IPR014720 GO:GO:0005524 GO:GO:0005813
GO:GO:0034605 GO:GO:0005730 Gene3D:3.30.160.20 GO:GO:0030529
GO:GO:0003725 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
GeneTree:ENSGT00550000074257 CTD:1660 KO:K13184 GO:GO:0070937
OMA:DDWIRLQ GO:GO:0070934 EMBL:AAEX03005146 EMBL:AAEX03005147
RefSeq:XP_537154.2 Ensembl:ENSCAFT00000020976 GeneID:480032
KEGG:cfa:480032 NextBio:20855120 Uniprot:E2RNT3
Length = 1276
Score = 140 (54.3 bits), Expect = 5.8e-12, Sum P(3) = 5.8e-12
Identities = 31/81 (38%), Positives = 48/81 (59%)
Query: 477 ILYERMKSL--GPDVPE--LIILPVYSALPSEMQTRIFEAAPPGSRKVVIATNIAETSLT 532
++Y K L PD ILP++S +P E Q ++F+ P G KV+++TNIAETS+T
Sbjct: 663 LIYTMQKHLEMNPDFGSHRYQILPLHSQIPREEQRKVFDPVPAGVTKVILSTNIAETSIT 722
Query: 533 IDGIFYVVDPFDIEVRQAKYH 553
I+ + YV+D +V+ H
Sbjct: 723 INDVVYVIDSCKQKVKLFTAH 743
Score = 117 (46.2 bits), Expect = 5.8e-12, Sum P(3) = 5.8e-12
Identities = 19/52 (36%), Positives = 34/52 (65%)
Query: 245 LLKQAVKKRPEIKLIVTSATLDAVKFSSYFFEAPIFTIPGRTFPVEVLYTKE 296
+L+ V+ PE+++++ SAT+D F YFF PI + GRT+PV+ + ++
Sbjct: 527 VLRDVVQAYPEVRIVLMSATIDTSMFCEYFFNCPIIEVYGRTYPVQEYFLED 578
Score = 39 (18.8 bits), Expect = 5.8e-12, Sum P(3) = 5.8e-12
Identities = 12/36 (33%), Positives = 20/36 (55%)
Query: 292 LYTKEPETDYLDASLITVMQIHLREPPGDVLLFLTG 327
L KE + ++A L + +++ PG VL+FL G
Sbjct: 628 LNEKETPFELIEALLKYIETLNV---PGAVLVFLPG 660
>UNIPROTKB|Q68FK8 [details] [associations]
symbol:dhx9 "ATP-dependent RNA helicase A-like protein"
species:8355 "Xenopus laevis" [GO:0070937 "CRD-mediated mRNA
stability complex" evidence=ISS] InterPro:IPR001159
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00035 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS50137 PROSITE:PS51194
SMART:SM00358 SMART:SM00490 SMART:SM00847 InterPro:IPR014720
GO:GO:0005524 GO:GO:0005634 GO:GO:0003677 Gene3D:3.30.160.20
GO:GO:0003725 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026 CTD:1660
HOVERGEN:HBG039429 KO:K13184 GO:GO:0070937 EMBL:BC079701
RefSeq:NP_001087383.1 UniGene:Xl.55621 ProteinModelPortal:Q68FK8
SMR:Q68FK8 PRIDE:Q68FK8 GeneID:447207 KEGG:xla:447207
Xenbase:XB-GENE-967780 Uniprot:Q68FK8
Length = 1262
Score = 134 (52.2 bits), Expect = 6.0e-12, Sum P(3) = 6.0e-12
Identities = 25/60 (41%), Positives = 41/60 (68%)
Query: 494 ILPVYSALPSEMQTRIFEAAPPGSRKVVIATNIAETSLTIDGIFYVVDPFDIEVRQAKYH 553
ILP++S +P + Q ++F+ P G KV+++TNIAETS+TI+ + YV+D +V+ H
Sbjct: 685 ILPLHSQIPRDEQRKVFDPVPDGIIKVILSTNIAETSITINDVVYVIDSCKQKVKLFTSH 744
Score = 122 (48.0 bits), Expect = 6.0e-12, Sum P(3) = 6.0e-12
Identities = 22/52 (42%), Positives = 34/52 (65%)
Query: 245 LLKQAVKKRPEIKLIVTSATLDAVKFSSYFFEAPIFTIPGRTFPVEVLYTKE 296
+L+ ++ PEI++I+ SAT+D F YFF PI + GRTFPV+ Y ++
Sbjct: 528 VLRDVIQAFPEIRVILMSATIDTSMFCEYFFNCPIIEVFGRTFPVQEYYLED 579
Score = 40 (19.1 bits), Expect = 6.0e-12, Sum P(3) = 6.0e-12
Identities = 12/36 (33%), Positives = 20/36 (55%)
Query: 292 LYTKEPETDYLDASLITVMQIHLREPPGDVLLFLTG 327
L KE + ++A L + +++ PG VL+FL G
Sbjct: 629 LSEKETPLELIEALLKYIETLNV---PGAVLVFLPG 661
>TAIR|locus:2009200 [details] [associations]
symbol:NIH "nuclear DEIH-boxhelicase" species:3702
"Arabidopsis thaliana" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=ISM] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IDA] [GO:0003678
"DNA helicase activity" evidence=ISS] [GO:0005634 "nucleus"
evidence=IDA] [GO:0006259 "DNA metabolic process" evidence=ISS]
InterPro:IPR002110 InterPro:IPR001374 InterPro:IPR001650
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF01424 Pfam:PF04408 PROSITE:PS51061 PROSITE:PS51194
SMART:SM00248 SMART:SM00490 SMART:SM00847 EMBL:CP002684
GO:GO:0005524 GO:GO:0005634 GO:GO:0003677 Gene3D:1.25.40.20
InterPro:IPR020683 SUPFAM:SSF48403 PROSITE:PS50297
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0003678
GO:GO:0008026 IPI:IPI00521146 RefSeq:NP_172152.1 UniGene:At.20810
PRIDE:F4IDQ6 EnsemblPlants:AT1G06670.1 GeneID:837177
KEGG:ath:AT1G06670 OMA:GNMEENT Uniprot:F4IDQ6
Length = 1576
Score = 137 (53.3 bits), Expect = 7.0e-12, Sum P(2) = 7.0e-12
Identities = 25/51 (49%), Positives = 39/51 (76%)
Query: 491 ELIILPVYSALPSEMQTRIFEAAPPGSRKVVIATNIAETSLTIDGIFYVVD 541
+ IIL ++S +P+E Q ++F P G RK+V+ATNIAE+++TID + YV+D
Sbjct: 606 KFIILCLHSRVPAEEQKKVFNRPPRGCRKIVLATNIAESAVTIDDVVYVID 656
Score = 115 (45.5 bits), Expect = 7.0e-12, Sum P(2) = 7.0e-12
Identities = 22/60 (36%), Positives = 35/60 (58%)
Query: 234 QRTNRISFPPGLLKQAVKKRPEIKLIVTSATLDAVKFSSYFFEAPIFTIPGRTFPVEVLY 293
+R + F +L+ + P ++LI+ SATLDA +FS YF P+ +PG T+PV +
Sbjct: 347 ERDSYSDFMLMILRDLLPSNPHLRLILMSATLDAERFSEYFGGCPVVRVPGFTYPVRTFF 406
Score = 38 (18.4 bits), Expect = 0.00057, Sum P(2) = 0.00057
Identities = 11/37 (29%), Positives = 18/37 (48%)
Query: 289 VEVLYTKEPETDYLDASLITVMQIHLREPPGDVLLFL 325
+ VL K + D + I V +IH R+ D +L +
Sbjct: 322 LRVLIGKGVNSSVPDITHIIVDEIHERDSYSDFMLMI 358
>UNIPROTKB|E2QTL7 [details] [associations]
symbol:DHX36 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
Ensembl:ENSCAFT00000013769 Uniprot:E2QTL7
Length = 988
Score = 145 (56.1 bits), Expect = 2.6e-06, P = 2.6e-06
Identities = 42/160 (26%), Positives = 74/160 (46%)
Query: 6 VTPIS-QMAEFPLEPNLSKMLIMSVHLQCSDEVLTIVSMLSVQNVFYRPXXXXXXXXXXX 64
+TP+ +A P+EP++ KM++ C D VLTI + LS ++ F P
Sbjct: 666 LTPLGVHLARLPVEPHIGKMILFGALFCCLDPVLTIAASLSFKDPFVIPLGKEKIADARR 725
Query: 65 XXF-NQMEGDHITLLAVYNSW-----RNNKFSNAWCYENFVQIRTLKRAQDVRKQ----L 114
+ DH+T++ + W R ++ +C+E F+ TL+ +++ Q L
Sbjct: 726 KELAKDTKSDHLTVVNAFEGWEEARRRGFRYEKDYCWEYFLSSNTLQMLHNMKGQFAEHL 785
Query: 115 LG---IMDRHKLDVVS-AGKNTVRVQKAV-CSGFFRNAAK 149
LG + R+ D S + ++ KAV C+G + AK
Sbjct: 786 LGAGFVSSRNPKDPKSNINSDNEKIIKAVICAGLYPKVAK 825
Score = 124 (48.7 bits), Expect = 7.1e-12, Sum P(4) = 7.1e-12
Identities = 22/34 (64%), Positives = 29/34 (85%)
Query: 508 RIFEAAPPGSRKVVIATNIAETSLTIDGIFYVVD 541
++F+ PPG RK+VIATNIAETS+TID + YV+D
Sbjct: 515 QVFKKTPPGVRKIVIATNIAETSITIDDVVYVID 548
Score = 119 (46.9 bits), Expect = 7.1e-12, Sum P(4) = 7.1e-12
Identities = 26/52 (50%), Positives = 35/52 (67%)
Query: 245 LLKQAVKKRPEIKLIVTSATLDAVKFSSYFFEAPIFTIPGRTFPVEVLYTKE 296
++K + RP++K+I+ SATL+A KFS YF P+ IPG TFPV V Y E
Sbjct: 343 VIKDLLNFRPDLKVILMSATLNAEKFSEYFGNCPMIHIPGFTFPV-VEYLLE 393
Score = 75 (31.5 bits), Expect = 5.1e-07, Sum P(4) = 5.1e-07
Identities = 31/112 (27%), Positives = 49/112 (43%)
Query: 333 KQLLG---IMDRHKLDVVS-AGKNTVRVQKAV-CSGFFR-------NAAKKDPQEGYRTL 380
+ LLG + R+ D S + ++ KAV C+G + N KK T
Sbjct: 783 EHLLGAGFVSSRNPKDPKSNINSDNEKIIKAVICAGLYPKVAKIRLNLGKKRKMVKVYTK 842
Query: 381 VDSQVVYIHPSSALFNRQP---EWVIYHELVQTTKEYMREVTSIDPKWLVEF 429
D +V IHP S + W+IYH ++T+ Y+ + T + P L+ F
Sbjct: 843 TDG-LVAIHPKSVNVEQTEFHYNWLIYHLKMRTSSIYLYDCTEVSPYCLLFF 893
Score = 47 (21.6 bits), Expect = 7.1e-12, Sum P(4) = 7.1e-12
Identities = 12/32 (37%), Positives = 18/32 (56%)
Query: 298 ETDYLDASLITVMQIH--LREPPGDVLLFLTG 327
+ D +D +LI + H L E G +L+FL G
Sbjct: 460 DDDKVDLNLIAALIRHIVLEEEDGAILVFLPG 491
Score = 43 (20.2 bits), Expect = 7.1e-12, Sum P(4) = 7.1e-12
Identities = 9/27 (33%), Positives = 18/27 (66%)
Query: 110 VRKQLLGIMDRHKLDVVSA----GKNT 132
++K+L+ ++D H++ V+S GK T
Sbjct: 206 MQKELVNMIDNHQVTVISGETGCGKTT 232
>UNIPROTKB|I3LHZ6 [details] [associations]
symbol:DHX9 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0003725
"double-stranded RNA binding" evidence=IEA] InterPro:IPR001159
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00035 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS50137 PROSITE:PS51194
SMART:SM00358 SMART:SM00490 SMART:SM00847 InterPro:IPR014720
GO:GO:0005524 Gene3D:3.30.160.20 GO:GO:0005622 GO:GO:0003725
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 GeneTree:ENSGT00550000074257 OMA:DDWIRLQ
Ensembl:ENSSSCT00000025297 Uniprot:I3LHZ6
Length = 1274
Score = 139 (54.0 bits), Expect = 7.3e-12, Sum P(3) = 7.3e-12
Identities = 26/60 (43%), Positives = 41/60 (68%)
Query: 494 ILPVYSALPSEMQTRIFEAAPPGSRKVVIATNIAETSLTIDGIFYVVDPFDIEVRQAKYH 553
ILP++S +P E Q ++F+ P G KV+++TNIAETS+TI+ + YV+D +V+ H
Sbjct: 675 ILPLHSQIPREEQRKVFDPVPAGVTKVILSTNIAETSITINDVVYVIDSCKQKVKLFTAH 734
Score = 117 (46.2 bits), Expect = 7.3e-12, Sum P(3) = 7.3e-12
Identities = 19/52 (36%), Positives = 34/52 (65%)
Query: 245 LLKQAVKKRPEIKLIVTSATLDAVKFSSYFFEAPIFTIPGRTFPVEVLYTKE 296
+L+ V+ PE+++++ SAT+D F YFF PI + GRT+PV+ + ++
Sbjct: 522 VLRDVVQAYPEVRIVLMSATIDTSMFCEYFFNCPIIEVYGRTYPVQEYFLED 573
Score = 39 (18.8 bits), Expect = 7.3e-12, Sum P(3) = 7.3e-12
Identities = 12/36 (33%), Positives = 20/36 (55%)
Query: 292 LYTKEPETDYLDASLITVMQIHLREPPGDVLLFLTG 327
L KE + ++A L + +++ PG VL+FL G
Sbjct: 619 LNEKETPFELIEALLKYIETLNV---PGAVLVFLPG 651
>UNIPROTKB|H7BXY3 [details] [associations]
symbol:DHX30 "Putative ATP-dependent RNA helicase DHX30"
species:9606 "Homo sapiens" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408
PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
HGNC:HGNC:16716 EMBL:AC139667 EMBL:AC026318
ProteinModelPortal:H7BXY3 SMR:H7BXY3 PRIDE:H7BXY3
Ensembl:ENST00000348968 Bgee:H7BXY3 Uniprot:H7BXY3
Length = 1166
Score = 142 (55.0 bits), Expect = 8.3e-12, Sum P(3) = 8.3e-12
Identities = 30/59 (50%), Positives = 42/59 (71%)
Query: 483 KSLGPDVPELIILPVYSALPSEMQTRIFEAAPPGSRKVVIATNIAETSLTIDGIFYVVD 541
++LG + +ILPV+S +P Q IF+ P G RK+V+ATNIAETS+TI+ I +VVD
Sbjct: 662 EALGMHESKYLILPVHSNIPMMDQKAIFQQPPVGVRKIVLATNIAETSITINDIVHVVD 720
Score = 95 (38.5 bits), Expect = 8.3e-12, Sum P(3) = 8.3e-12
Identities = 19/52 (36%), Positives = 31/52 (59%)
Query: 245 LLKQAVKKRPEIKLIVTSATLDAVKFSSYFFEAPIFTIPGRTFPVEVLYTKE 296
LLK + P ++L++ SAT D +FS YF P+ +PG +PV+ Y ++
Sbjct: 546 LLKGLQRLNPALRLVLMSATGDNERFSRYFGGCPVIKVPGFMYPVKEHYLED 597
Score = 56 (24.8 bits), Expect = 8.3e-12, Sum P(3) = 8.3e-12
Identities = 12/33 (36%), Positives = 20/33 (60%)
Query: 302 LDASLITVMQIHL--REPPGDVLLFLTGKLDVR 332
LD L+T + +H+ R PG +L FL G +++
Sbjct: 622 LDLDLVTDLVLHIDARGEPGGILCFLPGWQEIK 654
>UNIPROTKB|Q7L2E3 [details] [associations]
symbol:DHX30 "Putative ATP-dependent RNA helicase DHX30"
species:9606 "Homo sapiens" [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005515 "protein
binding" evidence=IPI] [GO:0003682 "chromatin binding"
evidence=IDA] [GO:0042645 "mitochondrial nucleoid" evidence=IDA]
[GO:0005737 "cytoplasm" evidence=IDA] [GO:0005739 "mitochondrion"
evidence=IDA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS50137 PROSITE:PS51194
SMART:SM00490 SMART:SM00847 GO:GO:0005524 GO:GO:0003682
GO:GO:0003723 GO:GO:0042645 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 CTD:22907 HOGENOM:HOG000112212 HOVERGEN:HBG081437
KO:K13185 OrthoDB:EOG4VHK5M EMBL:AB020697 EMBL:AK002076
EMBL:AK291266 EMBL:BC014237 EMBL:BC015029 EMBL:BC020126
EMBL:BC038417 IPI:IPI00411733 IPI:IPI00926109 IPI:IPI00927809
PIR:E56236 RefSeq:NP_055781.2 RefSeq:NP_619520.1 UniGene:Hs.517948
PDB:2DB2 PDBsum:2DB2 ProteinModelPortal:Q7L2E3 SMR:Q7L2E3
IntAct:Q7L2E3 MINT:MINT-1186537 STRING:Q7L2E3 PhosphoSite:Q7L2E3
DMDM:74758997 PaxDb:Q7L2E3 PRIDE:Q7L2E3 DNASU:22907
Ensembl:ENST00000445061 Ensembl:ENST00000446256
Ensembl:ENST00000457607 GeneID:22907 KEGG:hsa:22907 UCSC:uc003crt.3
UCSC:uc003cru.3 GeneCards:GC03P047844 HGNC:HGNC:16716 HPA:HPA034806
neXtProt:NX_Q7L2E3 PharmGKB:PA27217 InParanoid:Q7L2E3 OMA:LHKEERY
PhylomeDB:Q7L2E3 EvolutionaryTrace:Q7L2E3 GenomeRNAi:22907
NextBio:43571 ArrayExpress:Q7L2E3 Bgee:Q7L2E3 CleanEx:HS_DHX30
Genevestigator:Q7L2E3 Uniprot:Q7L2E3
Length = 1194
Score = 142 (55.0 bits), Expect = 9.0e-12, Sum P(3) = 9.0e-12
Identities = 30/59 (50%), Positives = 42/59 (71%)
Query: 483 KSLGPDVPELIILPVYSALPSEMQTRIFEAAPPGSRKVVIATNIAETSLTIDGIFYVVD 541
++LG + +ILPV+S +P Q IF+ P G RK+V+ATNIAETS+TI+ I +VVD
Sbjct: 690 EALGMHESKYLILPVHSNIPMMDQKAIFQQPPVGVRKIVLATNIAETSITINDIVHVVD 748
Score = 95 (38.5 bits), Expect = 9.0e-12, Sum P(3) = 9.0e-12
Identities = 19/52 (36%), Positives = 31/52 (59%)
Query: 245 LLKQAVKKRPEIKLIVTSATLDAVKFSSYFFEAPIFTIPGRTFPVEVLYTKE 296
LLK + P ++L++ SAT D +FS YF P+ +PG +PV+ Y ++
Sbjct: 574 LLKGLQRLNPALRLVLMSATGDNERFSRYFGGCPVIKVPGFMYPVKEHYLED 625
Score = 56 (24.8 bits), Expect = 9.0e-12, Sum P(3) = 9.0e-12
Identities = 12/33 (36%), Positives = 20/33 (60%)
Query: 302 LDASLITVMQIHL--REPPGDVLLFLTGKLDVR 332
LD L+T + +H+ R PG +L FL G +++
Sbjct: 650 LDLDLVTDLVLHIDARGEPGGILCFLPGWQEIK 682
>UNIPROTKB|J9P3P6 [details] [associations]
symbol:DHX30 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GeneTree:ENSGT00700000104393 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 EMBL:AAEX03012236 Ensembl:ENSCAFT00000047198
Uniprot:J9P3P6
Length = 1135
Score = 141 (54.7 bits), Expect = 9.6e-12, Sum P(3) = 9.6e-12
Identities = 29/59 (49%), Positives = 42/59 (71%)
Query: 483 KSLGPDVPELIILPVYSALPSEMQTRIFEAAPPGSRKVVIATNIAETSLTIDGIFYVVD 541
++LG + +ILPV+S +P Q IF+ P G RK+V+ATNIAETS+T++ I +VVD
Sbjct: 690 EALGMHESKYLILPVHSNIPMMDQKAIFQQPPVGVRKIVLATNIAETSITVNDIVHVVD 748
Score = 95 (38.5 bits), Expect = 9.6e-12, Sum P(3) = 9.6e-12
Identities = 19/52 (36%), Positives = 31/52 (59%)
Query: 245 LLKQAVKKRPEIKLIVTSATLDAVKFSSYFFEAPIFTIPGRTFPVEVLYTKE 296
LLK + P ++L++ SAT D +FS YF P+ +PG +PV+ Y ++
Sbjct: 574 LLKGLQRLNPALRLVLMSATGDNERFSRYFGGCPVIKVPGFMYPVKEHYLED 625
Score = 56 (24.8 bits), Expect = 9.6e-12, Sum P(3) = 9.6e-12
Identities = 12/33 (36%), Positives = 20/33 (60%)
Query: 302 LDASLITVMQIHL--REPPGDVLLFLTGKLDVR 332
LD L+T + +H+ R PG +L FL G +++
Sbjct: 650 LDLDLVTDLVLHIDARGEPGGILCFLPGWQEIK 682
>UNIPROTKB|F1SLI4 [details] [associations]
symbol:DHX30 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0042645 "mitochondrial nucleoid" evidence=IEA] [GO:0003682
"chromatin binding" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 GO:GO:0005524 GO:GO:0003682 GO:GO:0003676
GO:GO:0042645 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GeneTree:ENSGT00700000104393 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 OMA:LHKEERY EMBL:CU633694 Ensembl:ENSSSCT00000012419
Uniprot:F1SLI4
Length = 1222
Score = 142 (55.0 bits), Expect = 9.7e-12, Sum P(3) = 9.7e-12
Identities = 30/59 (50%), Positives = 42/59 (71%)
Query: 483 KSLGPDVPELIILPVYSALPSEMQTRIFEAAPPGSRKVVIATNIAETSLTIDGIFYVVD 541
++LG + +ILPV+S +P Q IF+ P G RK+V+ATNIAETS+TI+ I +VVD
Sbjct: 718 EALGMHESKYLILPVHSNIPMMDQKAIFQQPPVGVRKIVLATNIAETSITINDIVHVVD 776
Score = 95 (38.5 bits), Expect = 9.7e-12, Sum P(3) = 9.7e-12
Identities = 19/52 (36%), Positives = 31/52 (59%)
Query: 245 LLKQAVKKRPEIKLIVTSATLDAVKFSSYFFEAPIFTIPGRTFPVEVLYTKE 296
LLK + P ++L++ SAT D +FS YF P+ +PG +PV+ Y ++
Sbjct: 602 LLKGLQRLNPALRLVLMSATGDNERFSRYFGGCPVIKVPGFMYPVKEHYLED 653
Score = 56 (24.8 bits), Expect = 9.7e-12, Sum P(3) = 9.7e-12
Identities = 12/33 (36%), Positives = 20/33 (60%)
Query: 302 LDASLITVMQIHL--REPPGDVLLFLTGKLDVR 332
LD L+T + +H+ R PG +L FL G +++
Sbjct: 678 LDLDLVTDLVLHIDARGEPGGILCFLPGWQEIK 710
>TAIR|locus:2052841 [details] [associations]
symbol:HVT1 "helicase in vascular tissue and tapetum"
species:3702 "Arabidopsis thaliana" [GO:0003676 "nucleic acid
binding" evidence=IEA;ISS] [GO:0004386 "helicase activity"
evidence=IEA;ISS] [GO:0005524 "ATP binding" evidence=IEA;ISS]
[GO:0005634 "nucleus" evidence=ISM;ISS] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0000226 "microtubule
cytoskeleton organization" evidence=RCA] [GO:0000911 "cytokinesis
by cell plate formation" evidence=RCA] InterPro:IPR001374
InterPro:IPR001650 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF01424 Pfam:PF04408 PROSITE:PS51061
PROSITE:PS51194 SMART:SM00393 SMART:SM00490 SMART:SM00847
GO:GO:0005524 GO:GO:0005634 EMBL:CP002685 Gene3D:1.25.40.20
InterPro:IPR020683 SUPFAM:SSF48403 PROSITE:PS50297 GO:GO:0003676
GO:GO:0004386 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026 IPI:IPI00521007
RefSeq:NP_850154.2 UniGene:At.19969 ProteinModelPortal:F4INY4
SMR:F4INY4 PRIDE:F4INY4 EnsemblPlants:AT2G30800.1 GeneID:817631
KEGG:ath:AT2G30800 OMA:PYNNVST Uniprot:F4INY4
Length = 1299
Score = 133 (51.9 bits), Expect = 1.1e-11, Sum P(3) = 1.1e-11
Identities = 24/54 (44%), Positives = 39/54 (72%)
Query: 488 DVPELIILPVYSALPSEMQTRIFEAAPPGSRKVVIATNIAETSLTIDGIFYVVD 541
D + I+ ++S +P+ Q ++F PPG RK+V+ATNIAE+++TID + YV+D
Sbjct: 579 DSAKFDIICLHSMVPAGEQKKVFNRPPPGCRKIVLATNIAESAVTIDDVVYVID 632
Score = 123 (48.4 bits), Expect = 1.1e-11, Sum P(3) = 1.1e-11
Identities = 22/56 (39%), Positives = 35/56 (62%)
Query: 241 FPPGLLKQAVKKRPEIKLIVTSATLDAVKFSSYFFEAPIFTIPGRTFPVEVLYTKE 296
F +++ + P ++LI+ SATLDA +FS YF P+ +PG T+PV LY ++
Sbjct: 324 FMLAIIRDLLPSNPHLRLILMSATLDAERFSGYFGGCPVVRVPGFTYPVRTLYLED 379
Score = 123 (48.4 bits), Expect = 0.00088, P = 0.00087
Identities = 40/168 (23%), Positives = 70/168 (41%)
Query: 11 QMAEFPLEPNLSKMLIMSVHLQCSDEVLTIVSMLSVQNVFYRPXXXXXXXXXXXXXFNQM 70
+ P+ P +SKML +V + C D LT+ + F P
Sbjct: 757 KFGHLPVHPLISKMLFFAVLVNCLDPALTLACAADYKEPFTMPMSPVERQKAAAAKLELA 816
Query: 71 -----EGDHITLLAVYNSWRNNK---FSNAWCYENFVQIRTLKRAQDVRKQLLGIMDRHK 122
+ DH+ ++A + W+N K S +C + FV +K +R QL + RH
Sbjct: 817 SLCGGDSDHLAVVAAFECWKNAKGRGLSAEFCSQYFVSPSAMKMLDQMRSQLESELKRHG 876
Query: 123 L---DVVSAGKNT--VRVQKAVCS-GFFRNAAKKDPQEGY--RTLVDS 162
+ D+ S +N+ + +AV + G + + P G RT+V++
Sbjct: 877 IIPNDISSCSQNSRDPGILRAVLAVGLYPMVGRLCPAFGNNRRTIVET 924
Score = 38 (18.4 bits), Expect = 1.1e-11, Sum P(3) = 1.1e-11
Identities = 19/62 (30%), Positives = 29/62 (46%)
Query: 294 TKEPETDYLDASLITVMQIHL--REPPGDVLLFLTGKLDV---RKQLLG---IMDRHKLD 345
T PE +D SLI + + G +L+FL G D+ R++LL D K D
Sbjct: 527 TINPEQ--VDVSLIQQLMRKICGDSEDGAILVFLPGWDDINKTRQRLLENPFFADSAKFD 584
Query: 346 VV 347
++
Sbjct: 585 II 586
>TAIR|locus:2196255 [details] [associations]
symbol:AT1G58050 species:3702 "Arabidopsis thaliana"
[GO:0003676 "nucleic acid binding" evidence=IEA;ISS] [GO:0004386
"helicase activity" evidence=IEA;ISS] [GO:0005524 "ATP binding"
evidence=IEA;ISS] [GO:0005737 "cytoplasm" evidence=ISM] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] InterPro:IPR001650
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026 EMBL:AC079604
IPI:IPI00531251 PIR:F96613 RefSeq:NP_176102.1 UniGene:At.52250
ProteinModelPortal:Q9C6G0 SMR:Q9C6G0 PaxDb:Q9C6G0 PRIDE:Q9C6G0
EnsemblPlants:AT1G58050.1 GeneID:842172 KEGG:ath:AT1G58050
TAIR:At1g58050 HOGENOM:HOG000240812 InParanoid:Q9C6G0 OMA:ISPENED
PhylomeDB:Q9C6G0 ProtClustDB:CLSN2679369 Genevestigator:Q9C6G0
Uniprot:Q9C6G0
Length = 1417
Score = 135 (52.6 bits), Expect = 1.2e-11, Sum P(2) = 1.2e-11
Identities = 25/48 (52%), Positives = 37/48 (77%)
Query: 494 ILPVYSALPSEMQTRIFEAAPPGSRKVVIATNIAETSLTIDGIFYVVD 541
+LP++S++ S Q ++F P G RKV+IATNIAETS+TI+ + YV+D
Sbjct: 916 LLPLHSSIASTEQKKVFLRPPKGIRKVIIATNIAETSITIEDVVYVID 963
Score = 114 (45.2 bits), Expect = 1.2e-11, Sum P(2) = 1.2e-11
Identities = 28/69 (40%), Positives = 42/69 (60%)
Query: 245 LLKQAVKKR------PEIKLIVTSATLDAVKFSSYFFEAPIFTIPGRTFPVEVLYTKE-- 296
+LK ++K+ P++K+I+ SAT+DA +FS YF + PI T GRT PV + ++
Sbjct: 737 ILKSLIEKQSWDNALPKLKVILMSATVDAHQFSRYFGQCPIITAQGRTHPVTTYFLEDIY 796
Query: 297 PETDYLDAS 305
T YL AS
Sbjct: 797 ERTKYLLAS 805
Score = 47 (21.6 bits), Expect = 8.9e-05, Sum P(2) = 8.9e-05
Identities = 13/37 (35%), Positives = 19/37 (51%)
Query: 298 ETDYLDASLITVMQIHLREPPGDVLLFLTGKLDVRKQ 334
+T D + I V ++H R GD LL + L + KQ
Sbjct: 710 DTTLKDVTHIIVDEVHERSLMGDFLLIILKSL-IEKQ 745
>UNIPROTKB|Q5R874 [details] [associations]
symbol:DHX9 "ATP-dependent RNA helicase A" species:9601
"Pongo abelii" [GO:0030529 "ribonucleoprotein complex"
evidence=ISS] [GO:0070937 "CRD-mediated mRNA stability complex"
evidence=ISS] InterPro:IPR001159 InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00035 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS50137 PROSITE:PS51194 SMART:SM00358 SMART:SM00490
SMART:SM00847 InterPro:IPR014720 GO:GO:0005524 GO:GO:0005813
GO:GO:0034605 GO:GO:0005730 GO:GO:0003677 Gene3D:3.30.160.20
GO:GO:0030529 GO:GO:0003725 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
GeneTree:ENSGT00550000074257 CTD:1660 HOVERGEN:HBG039429 KO:K13184
OrthoDB:EOG4HHP1J GO:GO:0070937 OMA:DDWIRLQ GO:GO:0070934
EMBL:CR859880 RefSeq:XP_002809755.1 UniGene:Pab.8432
ProteinModelPortal:Q5R874 SMR:Q5R874 PRIDE:Q5R874
Ensembl:ENSPPYT00000000510 GeneID:100449914 KEGG:pon:100449914
InParanoid:Q5R874 Uniprot:Q5R874
Length = 1269
Score = 138 (53.6 bits), Expect = 1.2e-11, Sum P(3) = 1.2e-11
Identities = 26/60 (43%), Positives = 41/60 (68%)
Query: 494 ILPVYSALPSEMQTRIFEAAPPGSRKVVIATNIAETSLTIDGIFYVVDPFDIEVRQAKYH 553
ILP++S +P E Q ++F+ P G KV+++TNIAETS+TI+ + YV+D +V+ H
Sbjct: 683 ILPLHSQIPREEQRKVFDPVPVGVTKVILSTNIAETSITINDVVYVIDSCKQKVKLFTAH 742
Score = 117 (46.2 bits), Expect = 1.2e-11, Sum P(3) = 1.2e-11
Identities = 19/52 (36%), Positives = 34/52 (65%)
Query: 245 LLKQAVKKRPEIKLIVTSATLDAVKFSSYFFEAPIFTIPGRTFPVEVLYTKE 296
+L+ V+ PE+++++ SAT+D F YFF PI + GRT+PV+ + ++
Sbjct: 526 VLRDVVQAYPEVRIVLMSATIDTSMFCEYFFNCPIIEVYGRTYPVQEYFLED 577
Score = 40 (19.1 bits), Expect = 0.00057, Sum P(3) = 0.00057
Identities = 13/45 (28%), Positives = 22/45 (48%)
Query: 283 PGRTFPVEVLYTKEPETDYLDASLITVMQIHLREPPGDVLLFLTG 327
P + L KE + ++A L + +++ PG VL+FL G
Sbjct: 618 PETRLSMSQLNEKETPFELIEALLKYIETLNV---PGAVLVFLPG 659
Score = 38 (18.4 bits), Expect = 1.2e-11, Sum P(3) = 1.2e-11
Identities = 15/57 (26%), Positives = 26/57 (45%)
Query: 187 VQTTKEYMREVTSIDPKWLVEFAPAFFKFSDPTKLSKFKKNQRLEPLQRTNRISFPP 243
V +++ ++ +I + +E P S P L+ K Q EP QR N++ P
Sbjct: 276 VNLSQDLEHQLQNIIQELNLEILPPPEDPSVPVALNIGKLAQ-FEPSQRQNQVGVVP 331
>UNIPROTKB|Q08211 [details] [associations]
symbol:DHX9 "ATP-dependent RNA helicase A" species:9606
"Homo sapiens" [GO:0003725 "double-stranded RNA binding"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA] [GO:0005524
"ATP binding" evidence=IEA] [GO:0007623 "circadian rhythm"
evidence=IEA] [GO:0034605 "cellular response to heat" evidence=IEA]
[GO:0005730 "nucleolus" evidence=IEA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0005634 "nucleus" evidence=IDA] [GO:0005813
"centrosome" evidence=IDA] [GO:0070937 "CRD-mediated mRNA stability
complex" evidence=IDA] [GO:0070934 "CRD-mediated mRNA
stabilization" evidence=IMP] [GO:0030529 "ribonucleoprotein
complex" evidence=IDA] [GO:0003724 "RNA helicase activity"
evidence=TAS] [GO:0004003 "ATP-dependent DNA helicase activity"
evidence=TAS] [GO:0004004 "ATP-dependent RNA helicase activity"
evidence=TAS] [GO:0005737 "cytoplasm" evidence=TAS] [GO:0000398
"mRNA splicing, via spliceosome" evidence=TAS] [GO:0005654
"nucleoplasm" evidence=TAS] [GO:0008380 "RNA splicing"
evidence=TAS] [GO:0010467 "gene expression" evidence=TAS]
[GO:0001085 "RNA polymerase II transcription factor binding"
evidence=IPI] Reactome:REACT_71 InterPro:IPR001159
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00035 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS50137 PROSITE:PS51194
SMART:SM00358 SMART:SM00490 SMART:SM00847 InterPro:IPR014720
GO:GO:0005524 GO:GO:0005813 GO:GO:0005654 GO:GO:0034605
GO:GO:0005730 GO:GO:0003677 Reactome:REACT_1675 Gene3D:3.30.160.20
EMBL:CH471067 GO:GO:0030529 GO:GO:0003725 GO:GO:0004003
GO:GO:0000398 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717 GO:GO:0004004
HOGENOM:HOG000247063 CTD:1660 HOVERGEN:HBG039429 KO:K13184
OrthoDB:EOG4HHP1J GO:GO:0070937 OMA:DDWIRLQ EMBL:L13848 EMBL:U03643
EMBL:Y10658 EMBL:AB451248 EMBL:AB451372 EMBL:AL355999 EMBL:AL662837
EMBL:BC025245 EMBL:BC058896 EMBL:BC107881 EMBL:BC137136
IPI:IPI00844578 RefSeq:NP_001348.2 UniGene:Hs.191518 PDB:3LLM
PDBsum:3LLM ProteinModelPortal:Q08211 SMR:Q08211 DIP:DIP-31504N
IntAct:Q08211 MINT:MINT-5000572 STRING:Q08211 PhosphoSite:Q08211
DMDM:116241330 SWISS-2DPAGE:Q08211 PaxDb:Q08211 PRIDE:Q08211
Ensembl:ENST00000367549 GeneID:1660 KEGG:hsa:1660 UCSC:uc001gpr.3
GeneCards:GC01P182808 H-InvDB:HIX0001404 H-InvDB:HIX0149309
HGNC:HGNC:2750 HPA:CAB011819 HPA:HPA028050 MIM:603115
neXtProt:NX_Q08211 PharmGKB:PA27232 InParanoid:Q08211
GenomeRNAi:1660 NextBio:6832 PMAP-CutDB:Q08211 ArrayExpress:Q08211
Bgee:Q08211 CleanEx:HS_DHX9 Genevestigator:Q08211
GermOnline:ENSG00000135829 GO:GO:0070934 Uniprot:Q08211
Length = 1270
Score = 138 (53.6 bits), Expect = 1.2e-11, Sum P(3) = 1.2e-11
Identities = 26/60 (43%), Positives = 41/60 (68%)
Query: 494 ILPVYSALPSEMQTRIFEAAPPGSRKVVIATNIAETSLTIDGIFYVVDPFDIEVRQAKYH 553
ILP++S +P E Q ++F+ P G KV+++TNIAETS+TI+ + YV+D +V+ H
Sbjct: 683 ILPLHSQIPREEQRKVFDPVPVGVTKVILSTNIAETSITINDVVYVIDSCKQKVKLFTAH 742
Score = 117 (46.2 bits), Expect = 1.2e-11, Sum P(3) = 1.2e-11
Identities = 19/52 (36%), Positives = 34/52 (65%)
Query: 245 LLKQAVKKRPEIKLIVTSATLDAVKFSSYFFEAPIFTIPGRTFPVEVLYTKE 296
+L+ V+ PE+++++ SAT+D F YFF PI + GRT+PV+ + ++
Sbjct: 526 VLRDVVQAYPEVRIVLMSATIDTSMFCEYFFNCPIIEVYGRTYPVQEYFLED 577
Score = 40 (19.1 bits), Expect = 0.00057, Sum P(3) = 0.00057
Identities = 13/45 (28%), Positives = 22/45 (48%)
Query: 283 PGRTFPVEVLYTKEPETDYLDASLITVMQIHLREPPGDVLLFLTG 327
P + L KE + ++A L + +++ PG VL+FL G
Sbjct: 618 PETRLSMSQLNEKETPFELIEALLKYIETLNV---PGAVLVFLPG 659
Score = 38 (18.4 bits), Expect = 1.2e-11, Sum P(3) = 1.2e-11
Identities = 15/57 (26%), Positives = 26/57 (45%)
Query: 187 VQTTKEYMREVTSIDPKWLVEFAPAFFKFSDPTKLSKFKKNQRLEPLQRTNRISFPP 243
V +++ ++ +I + +E P S P L+ K Q EP QR N++ P
Sbjct: 276 VNLSQDLEHQLQNIIQELNLEILPPPEDPSVPVALNIGKLAQ-FEPSQRQNQVGVVP 331
>UNIPROTKB|J9P264 [details] [associations]
symbol:DHX30 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GeneTree:ENSGT00700000104393 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 EMBL:AAEX03012236 Ensembl:ENSCAFT00000047330
Uniprot:J9P264
Length = 1219
Score = 141 (54.7 bits), Expect = 1.2e-11, Sum P(3) = 1.2e-11
Identities = 29/59 (49%), Positives = 42/59 (71%)
Query: 483 KSLGPDVPELIILPVYSALPSEMQTRIFEAAPPGSRKVVIATNIAETSLTIDGIFYVVD 541
++LG + +ILPV+S +P Q IF+ P G RK+V+ATNIAETS+T++ I +VVD
Sbjct: 721 EALGMHESKYLILPVHSNIPMMDQKAIFQQPPVGVRKIVLATNIAETSITVNDIVHVVD 779
Score = 95 (38.5 bits), Expect = 1.2e-11, Sum P(3) = 1.2e-11
Identities = 19/52 (36%), Positives = 31/52 (59%)
Query: 245 LLKQAVKKRPEIKLIVTSATLDAVKFSSYFFEAPIFTIPGRTFPVEVLYTKE 296
LLK + P ++L++ SAT D +FS YF P+ +PG +PV+ Y ++
Sbjct: 602 LLKGLQRLNPALRLVLMSATGDNERFSRYFGGCPVIKVPGFMYPVKEHYLED 653
Score = 56 (24.8 bits), Expect = 1.2e-11, Sum P(3) = 1.2e-11
Identities = 12/33 (36%), Positives = 20/33 (60%)
Query: 302 LDASLITVMQIHL--REPPGDVLLFLTGKLDVR 332
LD L+T + +H+ R PG +L FL G +++
Sbjct: 681 LDLDLVTDLVLHIDARGEPGGILCFLPGWQEIK 713
>TIGR_CMR|GSU_1838 [details] [associations]
symbol:GSU_1838 "ATP-dependent helicase HrpB"
species:243231 "Geobacter sulfurreducens PCA" [GO:0004386 "helicase
activity" evidence=ISS] [GO:0008152 "metabolic process"
evidence=ISS] InterPro:IPR001650 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0003676 EMBL:AE017180 GenomeReviews:AE017180_GR
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
KO:K03579 OMA:GILTRMI InterPro:IPR010225 InterPro:IPR013689
Pfam:PF08482 PIRSF:PIRSF005496 TIGRFAMs:TIGR01970
HOGENOM:HOG000244610 RefSeq:NP_952888.1 ProteinModelPortal:Q74C37
DNASU:2688652 GeneID:2688652 KEGG:gsu:GSU1838 PATRIC:22026533
ProtClustDB:CLSK828597 BioCyc:GSUL243231:GH27-1781-MONOMER
Uniprot:Q74C37
Length = 846
Score = 127 (49.8 bits), Expect = 1.2e-11, Sum P(2) = 1.2e-11
Identities = 28/86 (32%), Positives = 52/86 (60%)
Query: 253 RPEIKLIVTSATLDAVKFSSYFFEAPIFTIPGRTFPVEVLYTKEPETDYLDASLITVMQI 312
R ++++IV SAT+ A ++ +AP+ T GR +PV + + + + L +++ ++I
Sbjct: 148 REDLRIIVMSATMAAAPVAALLGDAPVITSEGRNYPVALRHIPPNDRENLPSAVARAVRI 207
Query: 313 HLREPPGDVLLFLTGKLDVRK--QLL 336
+RE GD+L FL G ++R+ QLL
Sbjct: 208 AVRECEGDILAFLPGVGEIRRCGQLL 233
Score = 117 (46.2 bits), Expect = 1.2e-11, Sum P(2) = 1.2e-11
Identities = 27/55 (49%), Positives = 35/55 (63%)
Query: 487 PDVPELIILPVYSALPSEMQTRIFEAAPPGSRKVVIATNIAETSLTIDGIFYVVD 541
P + +++P+Y LP Q R P G RKVV+AT IAETSLTI+G+ VVD
Sbjct: 237 PPLHAPLVVPLYGDLPFVEQERAILPVP-GRRKVVLATTIAETSLTIEGVRVVVD 290
>UNIPROTKB|F1N0J0 [details] [associations]
symbol:DHX30 "Putative ATP-dependent RNA helicase DHX30"
species:9913 "Bos taurus" [GO:0042645 "mitochondrial nucleoid"
evidence=IEA] [GO:0003682 "chromatin binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 GO:GO:0005524 GO:GO:0003682 GO:GO:0003676
GO:GO:0042645 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GeneTree:ENSGT00700000104393 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 IPI:IPI00717186 UniGene:Bt.24588 OMA:LHKEERY
EMBL:DAAA02054438 Ensembl:ENSBTAT00000030623 Uniprot:F1N0J0
Length = 1220
Score = 141 (54.7 bits), Expect = 1.2e-11, Sum P(3) = 1.2e-11
Identities = 30/59 (50%), Positives = 42/59 (71%)
Query: 483 KSLGPDVPELIILPVYSALPSEMQTRIFEAAPPGSRKVVIATNIAETSLTIDGIFYVVD 541
++LG + +ILPV+S +P Q IF+ P G RK+V+ATNIAETS+TI+ I +VVD
Sbjct: 716 EALGMHESKYLILPVHSNIPMMDQKAIFQQPPIGVRKIVLATNIAETSITINDIVHVVD 774
Score = 95 (38.5 bits), Expect = 1.2e-11, Sum P(3) = 1.2e-11
Identities = 19/52 (36%), Positives = 31/52 (59%)
Query: 245 LLKQAVKKRPEIKLIVTSATLDAVKFSSYFFEAPIFTIPGRTFPVEVLYTKE 296
LLK + P ++L++ SAT D +FS YF P+ +PG +PV+ Y ++
Sbjct: 600 LLKGLQRLNPALRLVLMSATGDNERFSRYFGGCPVIKVPGFMYPVKEHYLED 651
Score = 56 (24.8 bits), Expect = 1.2e-11, Sum P(3) = 1.2e-11
Identities = 12/33 (36%), Positives = 20/33 (60%)
Query: 302 LDASLITVMQIHL--REPPGDVLLFLTGKLDVR 332
LD L+T + +H+ R PG +L FL G +++
Sbjct: 676 LDLDLVTDLVLHIDARGEPGGILCFLPGWQEIK 708
>UNIPROTKB|Q2NKY8 [details] [associations]
symbol:DHX30 "Putative ATP-dependent RNA helicase DHX30"
species:9913 "Bos taurus" [GO:0042645 "mitochondrial nucleoid"
evidence=ISS] [GO:0003682 "chromatin binding" evidence=ISS]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0003723 "RNA binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] InterPro:IPR001650 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408
PROSITE:PS50137 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
GO:GO:0005524 GO:GO:0003682 GO:GO:0003723 GO:GO:0042645
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026 EMBL:BC111349
IPI:IPI00717186 RefSeq:NP_001070003.1 UniGene:Bt.24588
ProteinModelPortal:Q2NKY8 SMR:Q2NKY8 PRIDE:Q2NKY8 GeneID:767607
KEGG:bta:767607 CTD:22907 HOGENOM:HOG000112212 HOVERGEN:HBG081437
InParanoid:Q2NKY8 KO:K13185 OrthoDB:EOG4VHK5M NextBio:20918019
Uniprot:Q2NKY8
Length = 1220
Score = 141 (54.7 bits), Expect = 1.2e-11, Sum P(3) = 1.2e-11
Identities = 30/59 (50%), Positives = 42/59 (71%)
Query: 483 KSLGPDVPELIILPVYSALPSEMQTRIFEAAPPGSRKVVIATNIAETSLTIDGIFYVVD 541
++LG + +ILPV+S +P Q IF+ P G RK+V+ATNIAETS+TI+ I +VVD
Sbjct: 716 EALGMHESKYLILPVHSNIPMMDQKAIFQQPPIGVRKIVLATNIAETSITINDIVHVVD 774
Score = 95 (38.5 bits), Expect = 1.2e-11, Sum P(3) = 1.2e-11
Identities = 19/52 (36%), Positives = 31/52 (59%)
Query: 245 LLKQAVKKRPEIKLIVTSATLDAVKFSSYFFEAPIFTIPGRTFPVEVLYTKE 296
LLK + P ++L++ SAT D +FS YF P+ +PG +PV+ Y ++
Sbjct: 600 LLKGLQRLNPALRLVLMSATGDNERFSRYFGGCPVIKVPGFMYPVKEHYLED 651
Score = 56 (24.8 bits), Expect = 1.2e-11, Sum P(3) = 1.2e-11
Identities = 12/33 (36%), Positives = 20/33 (60%)
Query: 302 LDASLITVMQIHL--REPPGDVLLFLTGKLDVR 332
LD L+T + +H+ R PG +L FL G +++
Sbjct: 676 LDLDLVTDLVLHIDARGEPGGILCFLPGWQEIK 708
>UNIPROTKB|E2RL62 [details] [associations]
symbol:DHX30 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GeneTree:ENSGT00700000104393 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 OMA:LHKEERY EMBL:AAEX03012236
Ensembl:ENSCAFT00000020710 NextBio:20852259 Uniprot:E2RL62
Length = 1222
Score = 141 (54.7 bits), Expect = 1.2e-11, Sum P(3) = 1.2e-11
Identities = 29/59 (49%), Positives = 42/59 (71%)
Query: 483 KSLGPDVPELIILPVYSALPSEMQTRIFEAAPPGSRKVVIATNIAETSLTIDGIFYVVD 541
++LG + +ILPV+S +P Q IF+ P G RK+V+ATNIAETS+T++ I +VVD
Sbjct: 718 EALGMHESKYLILPVHSNIPMMDQKAIFQQPPVGVRKIVLATNIAETSITVNDIVHVVD 776
Score = 95 (38.5 bits), Expect = 1.2e-11, Sum P(3) = 1.2e-11
Identities = 19/52 (36%), Positives = 31/52 (59%)
Query: 245 LLKQAVKKRPEIKLIVTSATLDAVKFSSYFFEAPIFTIPGRTFPVEVLYTKE 296
LLK + P ++L++ SAT D +FS YF P+ +PG +PV+ Y ++
Sbjct: 602 LLKGLQRLNPALRLVLMSATGDNERFSRYFGGCPVIKVPGFMYPVKEHYLED 653
Score = 56 (24.8 bits), Expect = 1.2e-11, Sum P(3) = 1.2e-11
Identities = 12/33 (36%), Positives = 20/33 (60%)
Query: 302 LDASLITVMQIHL--REPPGDVLLFLTGKLDVR 332
LD L+T + +H+ R PG +L FL G +++
Sbjct: 678 LDLDLVTDLVLHIDARGEPGGILCFLPGWQEIK 710
>UNIPROTKB|F1SLN0 [details] [associations]
symbol:DHX29 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0003676
"nucleic acid binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
GeneTree:ENSGT00550000074257 EMBL:CU929534
Ensembl:ENSSSCT00000018413 Uniprot:F1SLN0
Length = 1367
Score = 133 (51.9 bits), Expect = 1.4e-11, Sum P(2) = 1.4e-11
Identities = 26/60 (43%), Positives = 43/60 (71%)
Query: 245 LLKQAVKKRPEIKLIVTSATLDAVKFSSYFFEAPIFTIPGRTFPVEVLYTKE--PETDYL 302
+LK+ ++KR ++ LI+ SAT+D+ KFS+YF PI I GR++PVEV + ++ ET ++
Sbjct: 714 ILKEILQKRSDLHLILMSATVDSEKFSTYFTHCPILRISGRSYPVEVFHLEDIIEETGFV 773
Score = 115 (45.5 bits), Expect = 1.4e-11, Sum P(2) = 1.4e-11
Identities = 23/60 (38%), Positives = 37/60 (61%)
Query: 494 ILPVYSALPSEMQTRIFEAAPPGSRKVVIATNIAETSLTIDGIFYVVDPFDIEVRQAKYH 553
++ ++S L ++ Q F P G RK+V+ATNIAET +TI + +V+D ++ KYH
Sbjct: 900 VIALHSILSTQDQAAAFTLPPQGVRKIVLATNIAETGITIPDVVFVIDTG--RTKENKYH 957
Score = 111 (44.1 bits), Expect = 0.00013, Sum P(2) = 0.00013
Identities = 25/115 (21%), Positives = 51/115 (44%)
Query: 6 VTPISQ-MAEFPLEPNLSKMLIMSVHLQCSDEVLTIVSMLSVQNVFYRPXXXXXXXXXXX 64
+TP+ Q +A P+ + KMLI C D V T+ ++++ ++ F P
Sbjct: 1066 LTPLGQHLAALPVNVKIGKMLIFGAIFGCLDPVATLAAVMTEKSPFTTPIGRKDEADLAK 1125
Query: 65 XXFNQMEGDHITLLAVYNSWRNNKFSN------AWCYENFVQIRTLKRAQDVRKQ 113
+ DH+T+ Y W+ + A+C NF+ +L ++++++
Sbjct: 1126 SALAMADSDHLTIYNAYLGWKKAQQEGGYRSEIAYCRRNFLNRTSLLTLEEIKRR 1180
Score = 70 (29.7 bits), Expect = 6.0e-07, Sum P(2) = 6.0e-07
Identities = 14/37 (37%), Positives = 22/37 (59%)
Query: 388 IHPSSALFNRQPE-WVIYHELVQTTKEYMREVTSIDP 423
+HPSS + Q W++Y E ++ + Y+RE T I P
Sbjct: 1253 VHPSSVNRDLQTYGWLLYQEKIRYARVYLRETTLITP 1289
Score = 70 (29.7 bits), Expect = 0.00013, Sum P(2) = 0.00013
Identities = 14/37 (37%), Positives = 22/37 (59%)
Query: 167 IHPSSALFNRQPE-WVIYHELVQTTKEYMREVTSIDP 202
+HPSS + Q W++Y E ++ + Y+RE T I P
Sbjct: 1253 VHPSSVNRDLQTYGWLLYQEKIRYARVYLRETTLITP 1289
>UNIPROTKB|I3LG95 [details] [associations]
symbol:DHX29 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0003676
"nucleic acid binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
GeneTree:ENSGT00550000074257 EMBL:CU929534
Ensembl:ENSSSCT00000030291 Uniprot:I3LG95
Length = 1370
Score = 133 (51.9 bits), Expect = 1.4e-11, Sum P(2) = 1.4e-11
Identities = 26/60 (43%), Positives = 43/60 (71%)
Query: 245 LLKQAVKKRPEIKLIVTSATLDAVKFSSYFFEAPIFTIPGRTFPVEVLYTKE--PETDYL 302
+LK+ ++KR ++ LI+ SAT+D+ KFS+YF PI I GR++PVEV + ++ ET ++
Sbjct: 714 ILKEILQKRSDLHLILMSATVDSEKFSTYFTHCPILRISGRSYPVEVFHLEDIIEETGFV 773
Score = 115 (45.5 bits), Expect = 1.4e-11, Sum P(2) = 1.4e-11
Identities = 23/60 (38%), Positives = 37/60 (61%)
Query: 494 ILPVYSALPSEMQTRIFEAAPPGSRKVVIATNIAETSLTIDGIFYVVDPFDIEVRQAKYH 553
++ ++S L ++ Q F P G RK+V+ATNIAET +TI + +V+D ++ KYH
Sbjct: 900 VIALHSILSTQDQAAAFTLPPQGVRKIVLATNIAETGITIPDVVFVIDTG--RTKENKYH 957
Score = 108 (43.1 bits), Expect = 0.00027, Sum P(2) = 0.00027
Identities = 25/113 (22%), Positives = 49/113 (43%)
Query: 6 VTPISQ-MAEFPLEPNLSKMLIMSVHLQCSDEVLTIVSMLSVQNVFYRPXXXXXXXXXXX 64
+TP+ Q +A P+ + KMLI C D V T+ ++++ ++ F P
Sbjct: 1066 LTPLGQHLAALPVNVKIGKMLIFGAIFGCLDPVATLAAVMTEKSPFTTPIGRKDEADLAK 1125
Query: 65 XXFNQMEGDHITLLAVYNSWRNNKFSN------AWCYENFVQIRTLKRAQDVR 111
+ DH+T+ Y W+ + A+C NF+ +L ++++
Sbjct: 1126 SALAMADSDHLTIYNAYLGWKKAQQEGGYRSEIAYCRRNFLNRTSLLTLEEIK 1178
Score = 70 (29.7 bits), Expect = 6.0e-07, Sum P(2) = 6.0e-07
Identities = 14/37 (37%), Positives = 22/37 (59%)
Query: 388 IHPSSALFNRQPE-WVIYHELVQTTKEYMREVTSIDP 423
+HPSS + Q W++Y E ++ + Y+RE T I P
Sbjct: 1256 VHPSSVNRDLQTYGWLLYQEKIRYARVYLRETTLITP 1292
Score = 70 (29.7 bits), Expect = 0.00027, Sum P(2) = 0.00027
Identities = 14/37 (37%), Positives = 22/37 (59%)
Query: 167 IHPSSALFNRQPE-WVIYHELVQTTKEYMREVTSIDP 202
+HPSS + Q W++Y E ++ + Y+RE T I P
Sbjct: 1256 VHPSSVNRDLQTYGWLLYQEKIRYARVYLRETTLITP 1292
Score = 39 (18.8 bits), Expect = 0.00087, Sum P(3) = 0.00087
Identities = 16/84 (19%), Positives = 31/84 (36%)
Query: 238 RISFPPGLLKQAVKKRPEIKLIVTSATLDAVKFSSYFFEAPIFTIPGRTFPVEVLYTKEP 297
++SFP + Q + IK +S+ + F + T +++YTK
Sbjct: 1178 KVSFPETIAIQYFYRFYSIKTYYSSSASQTLSFQEIALLKAVLTAGLYDNVGKIIYTKSV 1237
Query: 298 ETDYLDASLITVMQIHLREPPGDV 321
+ A ++ Q + P V
Sbjct: 1238 DVTEKLACIVETAQGKAQVHPSSV 1261
>UNIPROTKB|I3LQ47 [details] [associations]
symbol:DHX29 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005739 "mitochondrion" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 GO:GO:0005739 GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 OMA:WLLYQEK GeneTree:ENSGT00550000074257
EMBL:CU929534 Ensembl:ENSSSCT00000025611 Uniprot:I3LQ47
Length = 1370
Score = 133 (51.9 bits), Expect = 1.4e-11, Sum P(2) = 1.4e-11
Identities = 26/60 (43%), Positives = 43/60 (71%)
Query: 245 LLKQAVKKRPEIKLIVTSATLDAVKFSSYFFEAPIFTIPGRTFPVEVLYTKE--PETDYL 302
+LK+ ++KR ++ LI+ SAT+D+ KFS+YF PI I GR++PVEV + ++ ET ++
Sbjct: 714 ILKEILQKRSDLHLILMSATVDSEKFSTYFTHCPILRISGRSYPVEVFHLEDIIEETGFV 773
Score = 115 (45.5 bits), Expect = 1.4e-11, Sum P(2) = 1.4e-11
Identities = 23/60 (38%), Positives = 37/60 (61%)
Query: 494 ILPVYSALPSEMQTRIFEAAPPGSRKVVIATNIAETSLTIDGIFYVVDPFDIEVRQAKYH 553
++ ++S L ++ Q F P G RK+V+ATNIAET +TI + +V+D ++ KYH
Sbjct: 900 VIALHSILSTQDQAAAFTLPPQGVRKIVLATNIAETGITIPDVVFVIDTG--RTKENKYH 957
Score = 114 (45.2 bits), Expect = 6.3e-05, Sum P(2) = 6.3e-05
Identities = 29/123 (23%), Positives = 53/123 (43%)
Query: 6 VTPISQ-MAEFPLEPNLSKMLIMSVHLQCSDEVLTIVSMLSVQNVFYRPXXXXXXXXXXX 64
+TP+ Q +A P+ + KMLI C D V T+ ++++ ++ F P
Sbjct: 1066 LTPLGQHLAALPVNVKIGKMLIFGAIFGCLDPVATLAAVMTEKSPFTTPIGRKDEADLAK 1125
Query: 65 XXFNQMEGDHITLLAVYNSWRNNKFSN------AWCYENFVQIRTLKRAQDVRKQLLGIM 118
+ DH+T+ Y W+ + A+C NF+ +L + R LL +M
Sbjct: 1126 SALAMADSDHLTIYNAYLGWKKAQQEGGYRSEIAYCRRNFLNRTSLLTLERRRTTLLKLM 1185
Query: 119 DRH 121
+ +
Sbjct: 1186 NEN 1188
Score = 70 (29.7 bits), Expect = 6.0e-07, Sum P(2) = 6.0e-07
Identities = 14/37 (37%), Positives = 22/37 (59%)
Query: 388 IHPSSALFNRQPE-WVIYHELVQTTKEYMREVTSIDP 423
+HPSS + Q W++Y E ++ + Y+RE T I P
Sbjct: 1256 VHPSSVNRDLQTYGWLLYQEKIRYARVYLRETTLITP 1292
Score = 70 (29.7 bits), Expect = 6.3e-05, Sum P(2) = 6.3e-05
Identities = 14/37 (37%), Positives = 22/37 (59%)
Query: 167 IHPSSALFNRQPE-WVIYHELVQTTKEYMREVTSIDP 202
+HPSS + Q W++Y E ++ + Y+RE T I P
Sbjct: 1256 VHPSSVNRDLQTYGWLLYQEKIRYARVYLRETTLITP 1292
>RGD|1308888 [details] [associations]
symbol:Dhx30 "DEAH (Asp-Glu-Ala-His) box polypeptide 30"
species:10116 "Rattus norvegicus" [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0003682 "chromatin binding"
evidence=IEA;ISO;ISS] [GO:0003723 "RNA binding" evidence=IEA]
[GO:0005515 "protein binding" evidence=IPI] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005737 "cytoplasm" evidence=ISO]
[GO:0005739 "mitochondrion" evidence=ISO] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0042645
"mitochondrial nucleoid" evidence=IEA;ISO;ISS] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS50137 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
RGD:1308888 GO:GO:0005524 GO:GO:0003682 GO:GO:0003723 GO:GO:0042645
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026 CTD:22907
HOGENOM:HOG000112212 HOVERGEN:HBG081437 KO:K13185 OrthoDB:EOG4VHK5M
EMBL:BC091359 IPI:IPI00949701 RefSeq:NP_001013267.1
UniGene:Rn.163034 ProteinModelPortal:Q5BJS0 SMR:Q5BJS0
PhosphoSite:Q5BJS0 PRIDE:Q5BJS0 Ensembl:ENSRNOT00000064600
GeneID:367172 KEGG:rno:367172 UCSC:RGD:1308888 NextBio:690809
ArrayExpress:Q5BJS0 Genevestigator:Q5BJS0
GermOnline:ENSRNOG00000029194 Uniprot:Q5BJS0
Length = 1194
Score = 140 (54.3 bits), Expect = 1.5e-11, Sum P(3) = 1.5e-11
Identities = 29/59 (49%), Positives = 42/59 (71%)
Query: 483 KSLGPDVPELIILPVYSALPSEMQTRIFEAAPPGSRKVVIATNIAETSLTIDGIFYVVD 541
++LG + +ILPV+S +P Q IF+ P G RK+V+ATNIAETS+T++ I +VVD
Sbjct: 690 EALGMHESKYLILPVHSNIPMMDQKAIFQQPPLGVRKIVLATNIAETSITVNDIVHVVD 748
Score = 95 (38.5 bits), Expect = 1.5e-11, Sum P(3) = 1.5e-11
Identities = 19/52 (36%), Positives = 31/52 (59%)
Query: 245 LLKQAVKKRPEIKLIVTSATLDAVKFSSYFFEAPIFTIPGRTFPVEVLYTKE 296
LLK + P ++L++ SAT D +FS YF P+ +PG +PV+ Y ++
Sbjct: 574 LLKGLQRLNPALRLVLMSATGDNERFSRYFGGCPVIKVPGFMYPVKEHYLED 625
Score = 56 (24.8 bits), Expect = 1.5e-11, Sum P(3) = 1.5e-11
Identities = 12/33 (36%), Positives = 20/33 (60%)
Query: 302 LDASLITVMQIHL--REPPGDVLLFLTGKLDVR 332
LD L+T + +H+ R PG +L FL G +++
Sbjct: 650 LDLDLVTDLVLHIDARGEPGGILCFLPGWQEIK 682
>UNIPROTKB|Q5BJS0 [details] [associations]
symbol:Dhx30 "Putative ATP-dependent RNA helicase DHX30"
species:10116 "Rattus norvegicus" [GO:0005524 "ATP binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS50137 PROSITE:PS51194
SMART:SM00490 SMART:SM00847 RGD:1308888 GO:GO:0005524 GO:GO:0003682
GO:GO:0003723 GO:GO:0042645 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 CTD:22907 HOGENOM:HOG000112212 HOVERGEN:HBG081437
KO:K13185 OrthoDB:EOG4VHK5M EMBL:BC091359 IPI:IPI00949701
RefSeq:NP_001013267.1 UniGene:Rn.163034 ProteinModelPortal:Q5BJS0
SMR:Q5BJS0 PhosphoSite:Q5BJS0 PRIDE:Q5BJS0
Ensembl:ENSRNOT00000064600 GeneID:367172 KEGG:rno:367172
UCSC:RGD:1308888 NextBio:690809 ArrayExpress:Q5BJS0
Genevestigator:Q5BJS0 GermOnline:ENSRNOG00000029194 Uniprot:Q5BJS0
Length = 1194
Score = 140 (54.3 bits), Expect = 1.5e-11, Sum P(3) = 1.5e-11
Identities = 29/59 (49%), Positives = 42/59 (71%)
Query: 483 KSLGPDVPELIILPVYSALPSEMQTRIFEAAPPGSRKVVIATNIAETSLTIDGIFYVVD 541
++LG + +ILPV+S +P Q IF+ P G RK+V+ATNIAETS+T++ I +VVD
Sbjct: 690 EALGMHESKYLILPVHSNIPMMDQKAIFQQPPLGVRKIVLATNIAETSITVNDIVHVVD 748
Score = 95 (38.5 bits), Expect = 1.5e-11, Sum P(3) = 1.5e-11
Identities = 19/52 (36%), Positives = 31/52 (59%)
Query: 245 LLKQAVKKRPEIKLIVTSATLDAVKFSSYFFEAPIFTIPGRTFPVEVLYTKE 296
LLK + P ++L++ SAT D +FS YF P+ +PG +PV+ Y ++
Sbjct: 574 LLKGLQRLNPALRLVLMSATGDNERFSRYFGGCPVIKVPGFMYPVKEHYLED 625
Score = 56 (24.8 bits), Expect = 1.5e-11, Sum P(3) = 1.5e-11
Identities = 12/33 (36%), Positives = 20/33 (60%)
Query: 302 LDASLITVMQIHL--REPPGDVLLFLTGKLDVR 332
LD L+T + +H+ R PG +L FL G +++
Sbjct: 650 LDLDLVTDLVLHIDARGEPGGILCFLPGWQEIK 682
>MGI|MGI:1920081 [details] [associations]
symbol:Dhx30 "DEAH (Asp-Glu-Ala-His) box polypeptide 30"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0003682 "chromatin binding" evidence=ISO] [GO:0003723 "RNA
binding" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0005739 "mitochondrion" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0008150 "biological_process" evidence=ND] [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0042645 "mitochondrial
nucleoid" evidence=ISO] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS50137 PROSITE:PS51194
SMART:SM00490 SMART:SM00847 MGI:MGI:1920081 GO:GO:0005524
GO:GO:0003682 GO:GO:0003723 GO:GO:0042645 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643
GeneTree:ENSGT00700000104393 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 CTD:22907 HOGENOM:HOG000112212 HOVERGEN:HBG081437
KO:K13185 OMA:LHKEERY EMBL:AB047557 EMBL:AK146326 EMBL:AK148778
EMBL:AK153969 EMBL:BC004082 EMBL:BC016202 IPI:IPI00127902
IPI:IPI00270064 IPI:IPI00761204 RefSeq:NP_001239611.1
RefSeq:NP_001239612.1 RefSeq:NP_579925.1 UniGene:Mm.276305
ProteinModelPortal:Q99PU8 SMR:Q99PU8 PhosphoSite:Q99PU8
PaxDb:Q99PU8 PRIDE:Q99PU8 Ensembl:ENSMUST00000035056
Ensembl:ENSMUST00000062368 Ensembl:ENSMUST00000111991
Ensembl:ENSMUST00000136969 Ensembl:ENSMUST00000142911
Ensembl:ENSMUST00000148287 Ensembl:ENSMUST00000165596 GeneID:72831
KEGG:mmu:72831 UCSC:uc009rtg.1 UCSC:uc009rth.1 UCSC:uc009rti.1
ChiTaRS:DHX30 NextBio:337009 Bgee:Q99PU8 CleanEx:MM_DHX30
Genevestigator:Q99PU8 GermOnline:ENSMUSG00000032480 Uniprot:Q99PU8
Length = 1217
Score = 140 (54.3 bits), Expect = 1.6e-11, Sum P(3) = 1.6e-11
Identities = 29/59 (49%), Positives = 42/59 (71%)
Query: 483 KSLGPDVPELIILPVYSALPSEMQTRIFEAAPPGSRKVVIATNIAETSLTIDGIFYVVD 541
++LG + +ILPV+S +P Q IF+ P G RK+V+ATNIAETS+T++ I +VVD
Sbjct: 713 EALGMHESKYLILPVHSNIPMMDQKAIFQQPPLGVRKIVLATNIAETSITVNDIVHVVD 771
Score = 95 (38.5 bits), Expect = 1.6e-11, Sum P(3) = 1.6e-11
Identities = 19/52 (36%), Positives = 31/52 (59%)
Query: 245 LLKQAVKKRPEIKLIVTSATLDAVKFSSYFFEAPIFTIPGRTFPVEVLYTKE 296
LLK + P ++L++ SAT D +FS YF P+ +PG +PV+ Y ++
Sbjct: 597 LLKGLQRLNPALRLVLMSATGDNERFSRYFGGCPVIKVPGFMYPVKEHYLED 648
Score = 56 (24.8 bits), Expect = 1.6e-11, Sum P(3) = 1.6e-11
Identities = 12/33 (36%), Positives = 20/33 (60%)
Query: 302 LDASLITVMQIHL--REPPGDVLLFLTGKLDVR 332
LD L+T + +H+ R PG +L FL G +++
Sbjct: 673 LDLDLVTDLVLHIDARGEPGGILCFLPGWQEIK 705
>UNIPROTKB|D4A1V3 [details] [associations]
symbol:Dhx30 "Putative ATP-dependent RNA helicase DHX30"
species:10116 "Rattus norvegicus" [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408
PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
RGD:1308888 GO:GO:0005524 GO:GO:0003682 GO:GO:0003676 GO:GO:0042645
EMBL:CH473954 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026 OMA:LHKEERY
UniGene:Rn.163034 IPI:IPI00203041 Ensembl:ENSRNOT00000045878
Uniprot:D4A1V3
Length = 1222
Score = 140 (54.3 bits), Expect = 1.6e-11, Sum P(3) = 1.6e-11
Identities = 29/59 (49%), Positives = 42/59 (71%)
Query: 483 KSLGPDVPELIILPVYSALPSEMQTRIFEAAPPGSRKVVIATNIAETSLTIDGIFYVVD 541
++LG + +ILPV+S +P Q IF+ P G RK+V+ATNIAETS+T++ I +VVD
Sbjct: 718 EALGMHESKYLILPVHSNIPMMDQKAIFQQPPLGVRKIVLATNIAETSITVNDIVHVVD 776
Score = 95 (38.5 bits), Expect = 1.6e-11, Sum P(3) = 1.6e-11
Identities = 19/52 (36%), Positives = 31/52 (59%)
Query: 245 LLKQAVKKRPEIKLIVTSATLDAVKFSSYFFEAPIFTIPGRTFPVEVLYTKE 296
LLK + P ++L++ SAT D +FS YF P+ +PG +PV+ Y ++
Sbjct: 602 LLKGLQRLNPALRLVLMSATGDNERFSRYFGGCPVIKVPGFMYPVKEHYLED 653
Score = 56 (24.8 bits), Expect = 1.6e-11, Sum P(3) = 1.6e-11
Identities = 12/33 (36%), Positives = 20/33 (60%)
Query: 302 LDASLITVMQIHL--REPPGDVLLFLTGKLDVR 332
LD L+T + +H+ R PG +L FL G +++
Sbjct: 678 LDLDLVTDLVLHIDARGEPGGILCFLPGWQEIK 710
>UNIPROTKB|E1B9N7 [details] [associations]
symbol:DHX29 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005739 "mitochondrion" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 GO:GO:0005739 GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 OMA:WLLYQEK GeneTree:ENSGT00550000074257
EMBL:DAAA02050346 IPI:IPI00907457 Ensembl:ENSBTAT00000013897
ArrayExpress:E1B9N7 Uniprot:E1B9N7
Length = 1367
Score = 132 (51.5 bits), Expect = 1.8e-11, Sum P(2) = 1.8e-11
Identities = 26/60 (43%), Positives = 42/60 (70%)
Query: 245 LLKQAVKKRPEIKLIVTSATLDAVKFSSYFFEAPIFTIPGRTFPVEVLYTKE--PETDYL 302
+LK+ ++KR ++ LI+ SAT+D KFS+YF PI I GR++PVEV + ++ ET ++
Sbjct: 714 ILKEILQKRSDLHLILMSATVDCEKFSTYFTHCPILRISGRSYPVEVFHLEDIIEETGFV 773
Score = 126 (49.4 bits), Expect = 3.3e-06, Sum P(2) = 3.3e-06
Identities = 28/120 (23%), Positives = 56/120 (46%)
Query: 6 VTPISQ-MAEFPLEPNLSKMLIMSVHLQCSDEVLTIVSMLSVQNVFYRPXXXXXXXXXXX 64
+TP+ Q +A P+ + KMLI C D V T+ ++++ ++ F P
Sbjct: 1063 LTPLGQHLAALPVNVKIGKMLIFGAIFGCLDPVATLAAVMTEKSPFITPIGRKDEADLAK 1122
Query: 65 XXFNQMEGDHITLLAVYNSWRNNKFSN------AWCYENFVQIRTLKRAQDVRKQLLGIM 118
+ DH+T+ Y W+ + A+C +NF+ +L +DV+++L+ ++
Sbjct: 1123 SALAMADSDHLTIYNAYLGWKKARQEGGYRSEIAYCRKNFLNRTSLLTLEDVKQELIKLV 1182
Score = 115 (45.5 bits), Expect = 1.8e-11, Sum P(2) = 1.8e-11
Identities = 23/60 (38%), Positives = 37/60 (61%)
Query: 494 ILPVYSALPSEMQTRIFEAAPPGSRKVVIATNIAETSLTIDGIFYVVDPFDIEVRQAKYH 553
++ ++S L ++ Q F P G RK+V+ATNIAET +TI + +V+D ++ KYH
Sbjct: 897 VIALHSILSTQDQAAAFTLPPQGVRKIVLATNIAETGITIPDVVFVIDTG--RTKENKYH 954
Score = 70 (29.7 bits), Expect = 7.7e-07, Sum P(2) = 7.7e-07
Identities = 15/39 (38%), Positives = 23/39 (58%)
Query: 388 IHPSSALFNRQPE---WVIYHELVQTTKEYMREVTSIDP 423
+HPSS NR + W++Y E ++ + Y+RE T I P
Sbjct: 1253 VHPSSV--NRDLQIYGWLLYQEKIRYARVYLRETTLITP 1289
Score = 70 (29.7 bits), Expect = 3.3e-06, Sum P(2) = 3.3e-06
Identities = 15/39 (38%), Positives = 23/39 (58%)
Query: 167 IHPSSALFNRQPE---WVIYHELVQTTKEYMREVTSIDP 202
+HPSS NR + W++Y E ++ + Y+RE T I P
Sbjct: 1253 VHPSSV--NRDLQIYGWLLYQEKIRYARVYLRETTLITP 1289
>UNIPROTKB|Q5R607 [details] [associations]
symbol:DHX30 "Putative ATP-dependent RNA helicase DHX30"
species:9601 "Pongo abelii" [GO:0003682 "chromatin binding"
evidence=ISS] [GO:0042645 "mitochondrial nucleoid" evidence=ISS]
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408
PROSITE:PS00690 PROSITE:PS50137 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 GO:GO:0005524 GO:GO:0003682 GO:GO:0003723
GO:GO:0042645 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026 CTD:22907
HOVERGEN:HBG081437 KO:K13185 EMBL:CR858337 EMBL:CR860693
RefSeq:NP_001125306.1 UniGene:Pab.19257 ProteinModelPortal:Q5R607
SMR:Q5R607 PRIDE:Q5R607 GeneID:100172205 KEGG:pon:100172205
InParanoid:Q5R607 Uniprot:Q5R607
Length = 1194
Score = 139 (54.0 bits), Expect = 1.9e-11, Sum P(3) = 1.9e-11
Identities = 30/59 (50%), Positives = 41/59 (69%)
Query: 483 KSLGPDVPELIILPVYSALPSEMQTRIFEAAPPGSRKVVIATNIAETSLTIDGIFYVVD 541
++LG + +ILPV+S +P Q IF+ P G RK+V+ATNIAETS TI+ I +VVD
Sbjct: 690 EALGMHESKYLILPVHSNIPMMDQKAIFQQPPVGVRKIVLATNIAETSTTINDIVHVVD 748
Score = 95 (38.5 bits), Expect = 1.9e-11, Sum P(3) = 1.9e-11
Identities = 19/52 (36%), Positives = 31/52 (59%)
Query: 245 LLKQAVKKRPEIKLIVTSATLDAVKFSSYFFEAPIFTIPGRTFPVEVLYTKE 296
LLK + P ++L++ SAT D +FS YF P+ +PG +PV+ Y ++
Sbjct: 574 LLKGLQRLNPALRLVLMSATGDNERFSRYFGGCPVIKVPGFMYPVKEHYLED 625
Score = 56 (24.8 bits), Expect = 1.9e-11, Sum P(3) = 1.9e-11
Identities = 12/33 (36%), Positives = 20/33 (60%)
Query: 302 LDASLITVMQIHL--REPPGDVLLFLTGKLDVR 332
LD L+T + +H+ R PG +L FL G +++
Sbjct: 650 LDLDLVTDLVLHIDARGEPGGILCFLPGWQEIK 682
>UNIPROTKB|E1C388 [details] [associations]
symbol:DHX29 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005739 "mitochondrion"
evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 GO:GO:0005739 GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 CTD:54505 OMA:WLLYQEK
GeneTree:ENSGT00550000074257 EMBL:AADN02054528 EMBL:AADN02054529
EMBL:AADN02054530 IPI:IPI00580778 RefSeq:XP_424728.2
UniGene:Gga.12357 Ensembl:ENSGALT00000023700 GeneID:427136
KEGG:gga:427136 NextBio:20828443 Uniprot:E1C388
Length = 1372
Score = 134 (52.2 bits), Expect = 2.0e-11, Sum P(3) = 2.0e-11
Identities = 25/52 (48%), Positives = 38/52 (73%)
Query: 245 LLKQAVKKRPEIKLIVTSATLDAVKFSSYFFEAPIFTIPGRTFPVEVLYTKE 296
+LK+ + KR ++ LI+ SAT+D+ KFSSYF PI I GR++PVEV + ++
Sbjct: 718 ILKEILHKRSDLHLILMSATVDSEKFSSYFAHCPILRISGRSYPVEVFHVED 769
Score = 116 (45.9 bits), Expect = 2.9e-06, Sum P(2) = 2.9e-06
Identities = 27/120 (22%), Positives = 54/120 (45%)
Query: 6 VTPISQ-MAEFPLEPNLSKMLIMSVHLQCSDEVLTIVSMLSVQNVFYRPXXXXXXXXXXX 64
+TP+ Q +A P+ + KMLI C D V T+ ++++ ++ F P
Sbjct: 1068 LTPLGQHLAALPVNVKIGKMLIFGAIFGCLDPVATLAAVMTEKSPFTTPIGRKDEADLAK 1127
Query: 65 XXFNQMEGDHITLLAVYNSWRN------NKFSNAWCYENFVQIRTLKRAQDVRKQLLGIM 118
DH+T+ Y W+ ++ +C NF+ +L +DV+++L+ ++
Sbjct: 1128 SSIALAVSDHLTIYNAYLGWKKARQEGGHRAEMTYCRRNFLNRTSLLTLEDVKQELIKLV 1187
Score = 111 (44.1 bits), Expect = 2.0e-11, Sum P(3) = 2.0e-11
Identities = 22/60 (36%), Positives = 37/60 (61%)
Query: 494 ILPVYSALPSEMQTRIFEAAPPGSRKVVIATNIAETSLTIDGIFYVVDPFDIEVRQAKYH 553
++ ++S L ++ Q F P G RK+V+ATNIAET +TI + +V+D ++ +YH
Sbjct: 902 LIALHSVLSTQDQAAAFTVPPLGVRKIVLATNIAETGITIPDVVFVIDSG--RTKENRYH 959
Score = 81 (33.6 bits), Expect = 2.1e-08, Sum P(3) = 2.1e-08
Identities = 30/97 (30%), Positives = 45/97 (46%)
Query: 341 RHKLD----VVSAGKNTVRVQKAVCS-GFFRNAAK------KDPQEGYRTLVDSQV--VY 387
+H+LD S + + + KAV + G + N K D E LV++
Sbjct: 1198 QHRLDGNGGTQSLSLHEIALLKAVLTAGLYDNVGKIMYTKSVDITEKLACLVETAQGKAQ 1257
Query: 388 IHPSSALFNRQPE-WVIYHELVQTTKEYMREVTSIDP 423
+HPSS + Q W++Y E V+ K Y+RE T I P
Sbjct: 1258 VHPSSVNRDLQVHGWLLYQEKVRYAKVYLRETTLISP 1294
Score = 81 (33.6 bits), Expect = 2.9e-06, Sum P(2) = 2.9e-06
Identities = 30/97 (30%), Positives = 45/97 (46%)
Query: 120 RHKLD----VVSAGKNTVRVQKAVCS-GFFRNAAK------KDPQEGYRTLVDSQV--VY 166
+H+LD S + + + KAV + G + N K D E LV++
Sbjct: 1198 QHRLDGNGGTQSLSLHEIALLKAVLTAGLYDNVGKIMYTKSVDITEKLACLVETAQGKAQ 1257
Query: 167 IHPSSALFNRQPE-WVIYHELVQTTKEYMREVTSIDP 202
+HPSS + Q W++Y E V+ K Y+RE T I P
Sbjct: 1258 VHPSSVNRDLQVHGWLLYQEKVRYAKVYLRETTLISP 1294
Score = 47 (21.6 bits), Expect = 2.0e-11, Sum P(3) = 2.0e-11
Identities = 16/90 (17%), Positives = 35/90 (38%)
Query: 148 AKKDPQEGYRTLVDSQVVYIHPSSALFNRQPEWVIYHELVQTTKEYMREVTSIDPKWLVE 207
+K+D + + + ++ I A+ P ++ ++T+ + +E P E
Sbjct: 285 SKQDKDKQGQKVAQEKIRRIQQEMAMLEEHP---VFDPAIKTSNQQQKEKKKATPPQPQE 341
Query: 208 FAPAFFKFSDPTKLSKFKKNQRLEPLQRTN 237
P +K +K ++ EPL N
Sbjct: 342 TTLNLSLLEKPDGTAKEEKAKKKEPLDIRN 371
>UNIPROTKB|F5GZS0 [details] [associations]
symbol:DHX36 "Probable ATP-dependent RNA helicase DHX36"
species:9606 "Homo sapiens" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA]
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408
PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GO:GO:0003676
EMBL:AC018452 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026 EMBL:AC134026
HGNC:HGNC:14410 IPI:IPI00922725 ProteinModelPortal:F5GZS0
SMR:F5GZS0 PRIDE:F5GZS0 Ensembl:ENST00000544526 ArrayExpress:F5GZS0
Bgee:F5GZS0 Uniprot:F5GZS0
Length = 994
Score = 144 (55.7 bits), Expect = 3.4e-06, P = 3.4e-06
Identities = 42/160 (26%), Positives = 73/160 (45%)
Query: 6 VTPIS-QMAEFPLEPNLSKMLIMSVHLQCSDEVLTIVSMLSVQNVFYRPXXXXXXXXXXX 64
+TP+ +A P+EP++ KM++ C D VLTI + LS ++ F P
Sbjct: 672 LTPLGVHLARLPVEPHIGKMILFGALFCCLDPVLTIAASLSFKDPFVIPLGKEKIADARR 731
Query: 65 XXF-NQMEGDHITLLAVYNSW-----RNNKFSNAWCYENFVQIRTLKRAQDVRKQ----L 114
DH+T++ + W R ++ +C+E F+ TL+ +++ Q L
Sbjct: 732 KELAKDTRSDHLTVVNAFEGWEEARRRGFRYEKDYCWEYFLSSNTLQMLHNMKGQFAEHL 791
Query: 115 LG---IMDRHKLDVVS-AGKNTVRVQKAV-CSGFFRNAAK 149
LG + R+ D S + ++ KAV C+G + AK
Sbjct: 792 LGAGFVSSRNPKDPESNINSDNEKIIKAVICAGLYPKVAK 831
Score = 126 (49.4 bits), Expect = 2.2e-11, Sum P(4) = 2.2e-11
Identities = 23/39 (58%), Positives = 31/39 (79%)
Query: 503 SEMQTRIFEAAPPGSRKVVIATNIAETSLTIDGIFYVVD 541
S +++F+ PPG RK+VIATNIAETS+TID + YV+D
Sbjct: 516 SGTMSQVFKRTPPGVRKIVIATNIAETSITIDDVVYVID 554
Score = 110 (43.8 bits), Expect = 2.2e-11, Sum P(4) = 2.2e-11
Identities = 25/52 (48%), Positives = 34/52 (65%)
Query: 245 LLKQAVKKRPEIKLIVTSATLDAVKFSSYFFEAPIFTIPGRTFPVEVLYTKE 296
++K + R ++K+I+ SATL+A KFS YF P+ IPG TFPV V Y E
Sbjct: 349 VVKDLLNFRSDLKVILMSATLNAEKFSEYFGNCPMIHIPGFTFPV-VEYLLE 399
Score = 74 (31.1 bits), Expect = 3.7e-06, Sum P(4) = 3.7e-06
Identities = 30/112 (26%), Positives = 49/112 (43%)
Query: 333 KQLLG---IMDRHKLDVVS-AGKNTVRVQKAV-CSGFFR-------NAAKKDPQEGYRTL 380
+ LLG + R+ D S + ++ KAV C+G + N KK T
Sbjct: 789 EHLLGAGFVSSRNPKDPESNINSDNEKIIKAVICAGLYPKVAKIRLNLGKKRKMVKVYTK 848
Query: 381 VDSQVVYIHPSSALFNRQP---EWVIYHELVQTTKEYMREVTSIDPKWLVEF 429
D +V +HP S + W+IYH ++T+ Y+ + T + P L+ F
Sbjct: 849 TDG-LVAVHPKSVNVEQTDFHYNWLIYHLKMRTSSIYLYDCTEVSPYCLLFF 899
Score = 48 (22.0 bits), Expect = 2.2e-11, Sum P(4) = 2.2e-11
Identities = 13/32 (40%), Positives = 18/32 (56%)
Query: 298 ETDYLDASLITVM--QIHLREPPGDVLLFLTG 327
E D +D +LI + I L E G +L+FL G
Sbjct: 466 EDDKVDLNLIVALIRYIVLEEEDGAILVFLPG 497
Score = 44 (20.5 bits), Expect = 2.2e-11, Sum P(4) = 2.2e-11
Identities = 9/27 (33%), Positives = 18/27 (66%)
Query: 110 VRKQLLGIMDRHKLDVVSA----GKNT 132
++K+L+ ++D H++ V+S GK T
Sbjct: 212 MQKELVNLIDNHQVTVISGETGCGKTT 238
Score = 44 (20.5 bits), Expect = 0.00073, Sum P(2) = 0.00073
Identities = 9/27 (33%), Positives = 18/27 (66%)
Query: 331 VRKQLLGIMDRHKLDVVSA----GKNT 353
++K+L+ ++D H++ V+S GK T
Sbjct: 212 MQKELVNLIDNHQVTVISGETGCGKTT 238
>ZFIN|ZDB-GENE-070912-171 [details] [associations]
symbol:dhx9 "DEAH (Asp-Glu-Ala-His) box polypeptide
9" species:7955 "Danio rerio" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0003725
"double-stranded RNA binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0016787 "hydrolase activity"
evidence=IEA] InterPro:IPR001159 InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00035 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS50137 PROSITE:PS51194 SMART:SM00358 SMART:SM00490
SMART:SM00847 InterPro:IPR014720 ZFIN:ZDB-GENE-070912-171
GO:GO:0005524 Gene3D:3.30.160.20 GO:GO:0005622 GO:GO:0003725
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026 HOGENOM:HOG000247063
GeneTree:ENSGT00550000074257 HOVERGEN:HBG039429 OrthoDB:EOG4HHP1J
OMA:DDWIRLQ EMBL:BX571812 IPI:IPI00491874 UniGene:Dr.79297
SMR:B0S6Z1 Ensembl:ENSDART00000111661 Ensembl:ENSDART00000134918
Uniprot:B0S6Z1
Length = 1271
Score = 139 (54.0 bits), Expect = 2.3e-11, Sum P(3) = 2.3e-11
Identities = 27/60 (45%), Positives = 41/60 (68%)
Query: 494 ILPVYSALPSEMQTRIFEAAPPGSRKVVIATNIAETSLTIDGIFYVVDPFDIEVRQAKYH 553
ILP++S +P E Q R+FE P G KV+++TNIAETS+TI+ + +V+D +V+ H
Sbjct: 689 ILPLHSQIPREEQRRVFEPVPDGVTKVILSTNIAETSITINDVVFVLDSCKQKVKLFTSH 748
Score = 108 (43.1 bits), Expect = 2.3e-11, Sum P(3) = 2.3e-11
Identities = 17/52 (32%), Positives = 32/52 (61%)
Query: 245 LLKQAVKKRPEIKLIVTSATLDAVKFSSYFFEAPIFTIPGRTFPVEVLYTKE 296
+L+ V+ P++++I+ SAT+D F YFF P+ + GR PV+ + ++
Sbjct: 533 VLRDVVQAYPDVRVILMSATIDTTMFKEYFFNCPVIEVHGRAHPVQEYFLED 584
Score = 43 (20.2 bits), Expect = 2.3e-11, Sum P(3) = 2.3e-11
Identities = 14/36 (38%), Positives = 18/36 (50%)
Query: 292 LYTKEPETDYLDASLITVMQIHLREPPGDVLLFLTG 327
L KE + ++A L I E PG VL+FL G
Sbjct: 633 LNEKETSFELIEALL---KYIETLEVPGAVLVFLPG 665
WARNING: HSPs involving 47 database sequences were not reported due to the
limiting value of parameter B = 250.
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.321 0.136 0.402 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 558 545 0.00095 119 3 11 22 0.37 34
35 0.45 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 297
No. of states in DFA: 610 (65 KB)
Total size of DFA: 298 KB (2151 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:01
No. of threads or processors used: 24
Search cpu time: 44.07u 0.09s 44.16t Elapsed: 00:00:44
Total cpu time: 44.15u 0.09s 44.24t Elapsed: 00:00:45
Start: Thu Aug 15 14:39:04 2013 End: Thu Aug 15 14:39:49 2013
WARNINGS ISSUED: 2