BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy12731
(107 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9N5Y2|TECR_CAEEL Probable very-long-chain enoyl-CoA reductase art-1
OS=Caenorhabditis elegans GN=art-1 PE=3 SV=1
Length = 308
Score = 103 bits (258), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 52/98 (53%), Positives = 67/98 (68%), Gaps = 1/98 (1%)
Query: 3 VSGSFTVKDIKKEVHKAKSQLYPDRQAVRLEIKGKILKDSDDVKSLGLKNGDMV-FIKDL 61
+SGS T+K IKK + + K +L +RQA+R+E KGK L D + LGL + V +++DL
Sbjct: 23 ISGSETIKAIKKRIAQKKLKLTEERQALRVEPKGKPLADDQKLSDLGLSSQKAVLYVRDL 82
Query: 62 GPQIGWSTVFMAEYAGPLFVYLIFYYRPWIFYGSEAAS 99
GPQI W TVFMAEYAGPLFVY +FY RP YG A +
Sbjct: 83 GPQIAWKTVFMAEYAGPLFVYPLFYLRPTFIYGQAAVN 120
>sp|Q9NZ01|TECR_HUMAN Very-long-chain enoyl-CoA reductase OS=Homo sapiens GN=TECR PE=1
SV=1
Length = 308
Score = 90.9 bits (224), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 43/95 (45%), Positives = 60/95 (63%)
Query: 2 EVSGSFTVKDIKKEVHKAKSQLYPDRQAVRLEIKGKILKDSDDVKSLGLKNGDMVFIKDL 61
+V T+ +IK K Q YP RQ++RL+ KGK LKD D ++ L + ++ +DL
Sbjct: 22 KVEPHATIAEIKNLFTKTHPQWYPARQSLRLDPKGKSLKDEDVLQKLPVGTTATLYFRDL 81
Query: 62 GPQIGWSTVFMAEYAGPLFVYLIFYYRPWIFYGSE 96
G QI W TVF+ EYAGPLF+YL+FY+R YG +
Sbjct: 82 GAQISWVTVFLTEYAGPLFIYLLFYFRVPFIYGHK 116
>sp|Q3ZCD7|TECR_BOVIN Very-long-chain enoyl-CoA reductase OS=Bos taurus GN=TECR PE=2 SV=1
Length = 308
Score = 90.9 bits (224), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 43/95 (45%), Positives = 60/95 (63%)
Query: 2 EVSGSFTVKDIKKEVHKAKSQLYPDRQAVRLEIKGKILKDSDDVKSLGLKNGDMVFIKDL 61
+V T+ +IK K Q YP RQ++RL+ KGK LKD D ++ L + ++ +DL
Sbjct: 22 KVEPQATIAEIKNLFTKTHPQWYPARQSLRLDPKGKSLKDEDVLQKLPVGTTATLYFRDL 81
Query: 62 GPQIGWSTVFMAEYAGPLFVYLIFYYRPWIFYGSE 96
G QI W TVF+ EYAGPLF+YL+FY+R YG +
Sbjct: 82 GAQISWVTVFLTEYAGPLFIYLLFYFRVPFIYGRK 116
>sp|Q9CY27|TECR_MOUSE Very-long-chain enoyl-CoA reductase OS=Mus musculus GN=Tecr PE=1
SV=1
Length = 308
Score = 90.9 bits (224), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 43/95 (45%), Positives = 60/95 (63%)
Query: 2 EVSGSFTVKDIKKEVHKAKSQLYPDRQAVRLEIKGKILKDSDDVKSLGLKNGDMVFIKDL 61
+V T+ +IK K Q YP RQ++RL+ KGK LKD D ++ L + ++ +DL
Sbjct: 22 KVEPQATISEIKTLFTKTHPQWYPARQSLRLDPKGKSLKDEDVLQKLPVGTTATLYFRDL 81
Query: 62 GPQIGWSTVFMAEYAGPLFVYLIFYYRPWIFYGSE 96
G QI W TVF+ EYAGPLF+YL+FY+R YG +
Sbjct: 82 GAQISWVTVFLTEYAGPLFIYLLFYFRVPFIYGRK 116
>sp|Q64232|TECR_RAT Very-long-chain enoyl-CoA reductase OS=Rattus norvegicus GN=Tecr
PE=2 SV=1
Length = 308
Score = 90.9 bits (224), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 43/95 (45%), Positives = 60/95 (63%)
Query: 2 EVSGSFTVKDIKKEVHKAKSQLYPDRQAVRLEIKGKILKDSDDVKSLGLKNGDMVFIKDL 61
+V T+ +IK K Q YP RQ++RL+ KGK LKD D ++ L + ++ +DL
Sbjct: 22 KVEPQATISEIKTLFTKTHPQWYPARQSLRLDPKGKSLKDEDVLQKLPVGTTATLYFRDL 81
Query: 62 GPQIGWSTVFMAEYAGPLFVYLIFYYRPWIFYGSE 96
G QI W TVF+ EYAGPLF+YL+FY+R YG +
Sbjct: 82 GAQISWVTVFLTEYAGPLFIYLLFYFRVPFIYGRK 116
>sp|Q5HYJ1|TECRL_HUMAN Trans-2,3-enoyl-CoA reductase-like OS=Homo sapiens GN=TECRL PE=2
SV=1
Length = 363
Score = 90.1 bits (222), Expect = 3e-18, Method: Composition-based stats.
Identities = 42/100 (42%), Positives = 65/100 (65%), Gaps = 1/100 (1%)
Query: 2 EVSGSFTVKDIKKEVHKAKSQLYPDRQAVRLEIKGKILKDSDDVKSLGLKNGDMVFIKDL 61
+V+ S T+ D+K++ HKA + YP R ++LE G LKD ++S+ + ++ DL
Sbjct: 78 KVTQSSTIHDVKQKFHKACPKWYPSRVGLQLECGGPFLKDYITIQSIAASSIVTLYATDL 137
Query: 62 GPQIGWSTVFMAEYAGPLFVYLIFYYR-PWIFYGSEAASK 100
G Q+ W+TVF+AEY GPL +YL+FY R P I+ G E+A +
Sbjct: 138 GQQVSWTTVFLAEYTGPLLIYLLFYLRIPCIYDGKESARR 177
>sp|Q3SZ89|TECRL_BOVIN Trans-2,3-enoyl-CoA reductase-like OS=Bos taurus GN=TECRL PE=2 SV=1
Length = 363
Score = 87.4 bits (215), Expect = 2e-17, Method: Composition-based stats.
Identities = 40/100 (40%), Positives = 65/100 (65%), Gaps = 1/100 (1%)
Query: 2 EVSGSFTVKDIKKEVHKAKSQLYPDRQAVRLEIKGKILKDSDDVKSLGLKNGDMVFIKDL 61
+V+ T+ D+K++ HKA Q YP R ++LE G LKD+ ++S+ + ++ DL
Sbjct: 78 KVTQKSTIHDVKQKFHKACPQWYPSRVGLQLERGGPFLKDNLTIQSVAASSIVTLYFTDL 137
Query: 62 GPQIGWSTVFMAEYAGPLFVYLIFYYR-PWIFYGSEAASK 100
G Q+ W+TVF+AEY GPL +YL+FY R P+I+ E++ +
Sbjct: 138 GQQVSWTTVFLAEYTGPLLIYLLFYLRIPYIYNMKESSRR 177
>sp|Q8BFZ1|TECRL_MOUSE Trans-2,3-enoyl-CoA reductase-like OS=Mus musculus GN=Tecrl PE=2
SV=1
Length = 361
Score = 85.5 bits (210), Expect = 9e-17, Method: Composition-based stats.
Identities = 38/99 (38%), Positives = 64/99 (64%)
Query: 2 EVSGSFTVKDIKKEVHKAKSQLYPDRQAVRLEIKGKILKDSDDVKSLGLKNGDMVFIKDL 61
+V+ + T+ D+K++ HKA + YP R ++LE G L+D V+S+ + ++ DL
Sbjct: 76 KVTQTSTIHDVKQKFHKACPKWYPSRIGLQLEYGGPYLRDYITVQSVAASSIITLYFTDL 135
Query: 62 GPQIGWSTVFMAEYAGPLFVYLIFYYRPWIFYGSEAASK 100
G Q+GW+TVF+AEY+GPL +YL+FY R Y + +++
Sbjct: 136 GQQVGWTTVFLAEYSGPLLIYLLFYLRSSYIYDVKESTR 174
>sp|Q55C17|TECR_DICDI Very-long-chain enoyl-CoA reductase OS=Dictyostelium discoideum
GN=gpsn2 PE=3 SV=1
Length = 300
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 40/99 (40%), Positives = 62/99 (62%), Gaps = 14/99 (14%)
Query: 9 VKDIKKEVHKAKSQLYPDRQAVRLEIKGKILKDSDDVKSLGLKNGDMV----------FI 58
V ++KK++ +K++L +R +RL + K K + ++LG K+ D+V +
Sbjct: 26 VGELKKQI-SSKTRLGTER--IRLAVPSKTSKLPNAFEALG-KDSDLVSKHVGADSTLYF 81
Query: 59 KDLGPQIGWSTVFMAEYAGPLFVYLIFYYRPWIFYGSEA 97
KDLGPQI WS VF+ EYAGPLFVY IFY+ + YG+++
Sbjct: 82 KDLGPQISWSLVFICEYAGPLFVYPIFYFLSNLIYGTDS 120
>sp|Q9M2U2|ECR_ARATH Very-long-chain enoyl-CoA reductase OS=Arabidopsis thaliana GN=ECR
PE=2 SV=1
Length = 310
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 37/112 (33%), Positives = 56/112 (50%), Gaps = 11/112 (9%)
Query: 1 MEVSGSFTVKDIKKEVHKAKSQLYPDRQAVRLEI------KGKILKDSDDVKSL--GLKN 52
+++ S TV D+++ HK + YP RQ + L + K +L +K G N
Sbjct: 18 LDLPDSATVADLQEAFHKRAKKFYPSRQRLTLPVTPGSKDKPVVLNSKKSLKEYCDGNNN 77
Query: 53 GDMVFIKDLGPQIGWSTVFMAEYAGPLFVYLIFYYRP---WIFYGSEAASKP 101
V KDLG Q+ + T+F EY GPL +Y +FYY P ++ YG + P
Sbjct: 78 SLTVVFKDLGAQVSYRTLFFFEYLGPLLIYPVFYYFPVYKFLGYGEDCVIHP 129
>sp|O94511|YN67_SCHPO Putative enoyl reductase C646.07c OS=Schizosaccharomyces pombe
(strain 972 / ATCC 24843) GN=SPBC646.07c PE=3 SV=1
Length = 295
Score = 57.0 bits (136), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 24/50 (48%), Positives = 33/50 (66%)
Query: 36 GKILKDSDDVKSLGLKNGDMVFIKDLGPQIGWSTVFMAEYAGPLFVYLIF 85
G L + ++ G+ G +++KDLGPQIGW TVFM EY GPL ++L F
Sbjct: 52 GTTLLPNTTLRKYGVGPGATIWVKDLGPQIGWRTVFMIEYLGPLVIHLFF 101
>sp|Q99190|TSC13_YEAST Very-long-chain enoyl-CoA reductase OS=Saccharomyces cerevisiae
(strain ATCC 204508 / S288c) GN=TSC13 PE=1 SV=1
Length = 310
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 20/31 (64%), Positives = 23/31 (74%)
Query: 57 FIKDLGPQIGWSTVFMAEYAGPLFVYLIFYY 87
FIKDLGPQI W VF EY GP+ V+ +FYY
Sbjct: 74 FIKDLGPQISWRLVFFCEYLGPVLVHSLFYY 104
>sp|Q84WC6|UBP7_ARATH Ubiquitin carboxyl-terminal hydrolase 7 OS=Arabidopsis thaliana
GN=UBP7 PE=1 SV=1
Length = 477
Score = 35.0 bits (79), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 24/68 (35%), Positives = 36/68 (52%), Gaps = 13/68 (19%)
Query: 20 KSQLY------PDRQAVRLEIKGKILKDSDDVKSLGLKNGDMVFIKDLGPQIGWSTVFMA 73
K+QLY P+RQ ++ +KG +LKD D +LGLKNG + + +I A
Sbjct: 28 KAQLYDLSGVPPERQ--KIMVKGGLLKDDADWSTLGLKNGQKLMMMGTADEI-----VKA 80
Query: 74 EYAGPLFV 81
GP+F+
Sbjct: 81 PEKGPVFM 88
>sp|P32628|RAD23_YEAST UV excision repair protein RAD23 OS=Saccharomyces cerevisiae
(strain ATCC 204508 / S288c) GN=RAD23 PE=1 SV=1
Length = 398
Score = 31.6 bits (70), Expect = 1.7, Method: Composition-based stats.
Identities = 21/66 (31%), Positives = 32/66 (48%), Gaps = 15/66 (22%)
Query: 6 SFTVKDIKKE-----------VHKAKSQLYP----DRQAVRLEIKGKILKDSDDVKSLGL 50
S T K+ KKE + + K++L + ++L GK+L+DS V GL
Sbjct: 3 SLTFKNFKKEKVPLDLEPSNTILETKTKLAQSISCEESQIKLIYSGKVLQDSKTVSECGL 62
Query: 51 KNGDMV 56
K+GD V
Sbjct: 63 KDGDQV 68
>sp|Q9H347|UBQL3_HUMAN Ubiquilin-3 OS=Homo sapiens GN=UBQLN3 PE=1 SV=2
Length = 655
Score = 31.2 bits (69), Expect = 2.2, Method: Composition-based stats.
Identities = 16/51 (31%), Positives = 33/51 (64%), Gaps = 3/51 (5%)
Query: 3 VSGSFTVKDIKKEVHKAKSQLYPDRQAVRLEIKGKILKDSDDVKSLGLKNG 53
V+ + T++ +K+E+ + + + +PD+ + L GKILKD D + G+++G
Sbjct: 37 VTDTCTIQQLKEEISQ-RFKAHPDQ--LVLIFAGKILKDPDSLAQCGVRDG 84
>sp|Q9D952|EVPL_MOUSE Envoplakin OS=Mus musculus GN=Evpl PE=2 SV=3
Length = 2035
Score = 30.0 bits (66), Expect = 4.2, Method: Composition-based stats.
Identities = 17/66 (25%), Positives = 36/66 (54%), Gaps = 6/66 (9%)
Query: 9 VKDIKKEVHKAKSQLYPDRQAVRLEIKG---KILKDSDDVKSLGLKNGDMVFIKDLGPQI 65
+KD+ +V KA+ +P + + +IK ++ ++ + ++L K MV D+GP++
Sbjct: 94 LKDLFLDVDKARRLKHPQAEEIEKDIKQLHERVTQECSEYRALYEK---MVLPPDVGPRV 150
Query: 66 GWSTVF 71
W+ V
Sbjct: 151 DWARVL 156
>sp|Q9NRR5|UBQL4_HUMAN Ubiquilin-4 OS=Homo sapiens GN=UBQLN4 PE=1 SV=2
Length = 601
Score = 30.0 bits (66), Expect = 4.7, Method: Composition-based stats.
Identities = 18/57 (31%), Positives = 30/57 (52%), Gaps = 3/57 (5%)
Query: 8 TVKDIKKEVHKAKSQLYPDRQAVRLEIKGKILKDSDDVKSLGLKNGDMVFIKDLGPQ 64
+VK+ K+E+ + + + + L GKILKD D + G+K+G V + PQ
Sbjct: 33 SVKEFKEEISR---RFKAQQDQLVLIFAGKILKDGDTLNQHGIKDGLTVHLVIKTPQ 86
>sp|Q99NB8|UBQL4_MOUSE Ubiquilin-4 OS=Mus musculus GN=Ubqln4 PE=1 SV=1
Length = 596
Score = 30.0 bits (66), Expect = 4.8, Method: Composition-based stats.
Identities = 18/57 (31%), Positives = 30/57 (52%), Gaps = 3/57 (5%)
Query: 8 TVKDIKKEVHKAKSQLYPDRQAVRLEIKGKILKDSDDVKSLGLKNGDMVFIKDLGPQ 64
+VK+ K+E+ + + + + L GKILKD D + G+K+G V + PQ
Sbjct: 33 SVKEFKEEISR---RFKAQQDQLVLIFAGKILKDGDTLSQHGIKDGLTVHLVIKTPQ 86
>sp|D2TBH1|DTPA_ERWP6 Dipeptide and tripeptide permease A OS=Erwinia pyrifoliae (strain
DSM 12163 / CIP 106111 / Ep16/96) GN=dtpA PE=3 SV=1
Length = 492
Score = 29.6 bits (65), Expect = 6.0, Method: Composition-based stats.
Identities = 15/42 (35%), Positives = 21/42 (50%), Gaps = 4/42 (9%)
Query: 61 LGPQIGWSTVFMAEYAGPLFVYLIF-YYRPWIFYGSEAASKP 101
L Q GWST F + G L + F ++R W+ + SKP
Sbjct: 172 LAAQFGWSTAFGLSFVGMLITLVNFMFFRKWV---KDHGSKP 210
>sp|Q92817|EVPL_HUMAN Envoplakin OS=Homo sapiens GN=EVPL PE=1 SV=3
Length = 2033
Score = 29.3 bits (64), Expect = 7.0, Method: Composition-based stats.
Identities = 17/66 (25%), Positives = 36/66 (54%), Gaps = 6/66 (9%)
Query: 9 VKDIKKEVHKAKSQLYPDRQAVRLEIKG---KILKDSDDVKSLGLKNGDMVFIKDLGPQI 65
+KD+ +V KA+ +P + + +IK ++ ++ + ++L K MV D+GP++
Sbjct: 94 LKDLFLDVDKARRLKHPQAEEIEKDIKQLHERVTQECAEYRALYEK---MVLPPDVGPRV 150
Query: 66 GWSTVF 71
W+ V
Sbjct: 151 DWARVL 156
>sp|Q949Y0|UBP6_ARATH Ubiquitin carboxyl-terminal hydrolase 6 OS=Arabidopsis thaliana
GN=UBP6 PE=1 SV=1
Length = 482
Score = 28.9 bits (63), Expect = 8.7, Method: Compositional matrix adjust.
Identities = 17/52 (32%), Positives = 30/52 (57%), Gaps = 8/52 (15%)
Query: 20 KSQLY------PDRQAVRLEIKGKILKDSDDVKSLGLKNGDMVFIKDLGPQI 65
K+QLY P+RQ ++ +KG +LKD D ++G+K+G + + +I
Sbjct: 28 KAQLYDLTGVPPERQ--KIMVKGGLLKDDGDWAAIGVKDGQKLMMMGTADEI 77
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.320 0.138 0.412
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 39,995,399
Number of Sequences: 539616
Number of extensions: 1503912
Number of successful extensions: 4455
Number of sequences better than 100.0: 26
Number of HSP's better than 100.0 without gapping: 17
Number of HSP's successfully gapped in prelim test: 9
Number of HSP's that attempted gapping in prelim test: 4434
Number of HSP's gapped (non-prelim): 26
length of query: 107
length of database: 191,569,459
effective HSP length: 75
effective length of query: 32
effective length of database: 151,098,259
effective search space: 4835144288
effective search space used: 4835144288
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 55 (25.8 bits)