Your job contains 1 sequence.
>psy12747
MAKKLSDDKKMSKKEKDERILWKKNEVADFEATTFSIFYNNALFLAIVIFLSFYILKSFT
PTFNYIFSLWISAGFLALLSTGTK
The BLAST search returned 1 gene product which did not match your query constraints. Please see the full BLAST report below for the details.
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= psy12747
(84 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
UNIPROTKB|C9J365 - symbol:SSR3 "Translocon-associated pro... 252 1.5e-21 1
UNIPROTKB|Q9UNL2 - symbol:SSR3 "Translocon-associated pro... 252 1.5e-21 1
UNIPROTKB|E1C984 - symbol:SSR3 "Uncharacterized protein" ... 251 1.9e-21 1
UNIPROTKB|Q3SZ87 - symbol:SSR3 "Translocon-associated pro... 251 1.9e-21 1
UNIPROTKB|E2R0K5 - symbol:SSR3 "Uncharacterized protein" ... 251 1.9e-21 1
UNIPROTKB|I3LGD6 - symbol:SSR3 "Uncharacterized protein" ... 251 1.9e-21 1
MGI|MGI:1914687 - symbol:Ssr3 "signal sequence receptor, ... 251 1.9e-21 1
RGD|621630 - symbol:Ssr3 "signal sequence receptor, gamma... 251 1.9e-21 1
UNIPROTKB|Q08013 - symbol:Ssr3 "Translocon-associated pro... 251 1.9e-21 1
ZFIN|ZDB-GENE-030131-9134 - symbol:ssr3 "signal sequence ... 248 3.9e-21 1
UNIPROTKB|B4E2P2 - symbol:SSR3 "Translocon-associated pro... 247 4.9e-21 1
FB|FBgn0025700 - symbol:CG5885 species:7227 "Drosophila m... 245 8.0e-21 1
UNIPROTKB|C9JA28 - symbol:SSR3 "Translocon-associated pro... 188 8.8e-15 1
WB|WBGene00021420 - symbol:trap-3 species:6239 "Caenorhab... 153 4.5e-11 1
DICTYBASE|DDB_G0267524 - symbol:ssr3 "translocon-associat... 119 1.8e-07 1
>UNIPROTKB|C9J365 [details] [associations]
symbol:SSR3 "Translocon-associated protein subunit gamma"
species:9606 "Homo sapiens" [GO:0005784 "Sec61 translocon complex"
evidence=IEA] [GO:0006613 "cotranslational protein targeting to
membrane" evidence=IEA] [GO:0030176 "integral to endoplasmic
reticulum membrane" evidence=IEA] InterPro:IPR009779 Pfam:PF07074
GO:GO:0030176 GO:GO:0005784 GO:GO:0006613 HOGENOM:HOG000007534
PANTHER:PTHR13399 HGNC:HGNC:11325 ChiTaRS:SSR3 EMBL:AC092927
IPI:IPI00791847 STRING:C9J365 Ensembl:ENST00000463503
Ensembl:ENST00000496050 Uniprot:C9J365
Length = 133
Score = 252 (93.8 bits), Expect = 1.5e-21, P = 1.5e-21
Identities = 48/66 (72%), Positives = 56/66 (84%)
Query: 19 RILWKKNEVADFEATTFSIFYNNALFLAIVIFLSFYILKSFTPTFNYIFSLWISAGFLAL 78
RILWKKNEVAD+EATTFSIFYNN LFL +VI SF+ILK+F PT NYI S+ S+G +AL
Sbjct: 68 RILWKKNEVADYEATTFSIFYNNTLFLVVVIVASFFILKNFNPTVNYILSISASSGLIAL 127
Query: 79 LSTGTK 84
LSTG+K
Sbjct: 128 LSTGSK 133
>UNIPROTKB|Q9UNL2 [details] [associations]
symbol:SSR3 "Translocon-associated protein subunit gamma"
species:9606 "Homo sapiens" [GO:0005784 "Sec61 translocon complex"
evidence=IEA] [GO:0030176 "integral to endoplasmic reticulum
membrane" evidence=IEA] [GO:0006412 "translation" evidence=TAS]
[GO:0006614 "SRP-dependent cotranslational protein targeting to
membrane" evidence=TAS] [GO:0010467 "gene expression" evidence=TAS]
[GO:0044267 "cellular protein metabolic process" evidence=TAS]
Reactome:REACT_71 Reactome:REACT_17015 InterPro:IPR009779
Pfam:PF07074 GO:GO:0006412 EMBL:CH471052 GO:GO:0030176
GO:GO:0005784 GO:GO:0006614 CTD:6747 eggNOG:NOG255012
HOGENOM:HOG000007534 HOVERGEN:HBG012424 KO:K13251 OrthoDB:EOG4Z36FX
PANTHER:PTHR13399 EMBL:AF087907 EMBL:AF110647 EMBL:BT006669
EMBL:AK312935 EMBL:BC017203 IPI:IPI00009235 RefSeq:NP_009038.1
UniGene:Hs.518346 ProteinModelPortal:Q9UNL2 IntAct:Q9UNL2
MINT:MINT-1032208 STRING:Q9UNL2 PhosphoSite:Q9UNL2 DMDM:9087205
PaxDb:Q9UNL2 PRIDE:Q9UNL2 DNASU:6747 Ensembl:ENST00000265044
GeneID:6747 KEGG:hsa:6747 UCSC:uc003fau.3 GeneCards:GC03M156257
HGNC:HGNC:11325 HPA:HPA014906 MIM:606213 neXtProt:NX_Q9UNL2
PharmGKB:PA36149 InParanoid:Q9UNL2 PhylomeDB:Q9UNL2 ChiTaRS:SSR3
GenomeRNAi:6747 NextBio:26320 ArrayExpress:Q9UNL2 Bgee:Q9UNL2
CleanEx:HS_SSR3 Genevestigator:Q9UNL2 GermOnline:ENSG00000114850
Uniprot:Q9UNL2
Length = 185
Score = 252 (93.8 bits), Expect = 1.5e-21, P = 1.5e-21
Identities = 48/66 (72%), Positives = 56/66 (84%)
Query: 19 RILWKKNEVADFEATTFSIFYNNALFLAIVIFLSFYILKSFTPTFNYIFSLWISAGFLAL 78
RILWKKNEVAD+EATTFSIFYNN LFL +VI SF+ILK+F PT NYI S+ S+G +AL
Sbjct: 120 RILWKKNEVADYEATTFSIFYNNTLFLVVVIVASFFILKNFNPTVNYILSISASSGLIAL 179
Query: 79 LSTGTK 84
LSTG+K
Sbjct: 180 LSTGSK 185
>UNIPROTKB|E1C984 [details] [associations]
symbol:SSR3 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0005784 "Sec61 translocon complex" evidence=IEA]
[GO:0006613 "cotranslational protein targeting to membrane"
evidence=IEA] [GO:0030176 "integral to endoplasmic reticulum
membrane" evidence=IEA] InterPro:IPR009779 Pfam:PF07074
GO:GO:0030176 GO:GO:0005784 GO:GO:0006613 CTD:6747
GeneTree:ENSGT00390000000970 KO:K13251 OMA:TAYKNIK
PANTHER:PTHR13399 EMBL:AADN02021094 IPI:IPI00595042
RefSeq:XP_422829.1 UniGene:Gga.6341 Ensembl:ENSGALT00000016701
GeneID:425027 KEGG:gga:425027 NextBio:20827276 Uniprot:E1C984
Length = 187
Score = 251 (93.4 bits), Expect = 1.9e-21, P = 1.9e-21
Identities = 47/66 (71%), Positives = 56/66 (84%)
Query: 19 RILWKKNEVADFEATTFSIFYNNALFLAIVIFLSFYILKSFTPTFNYIFSLWISAGFLAL 78
RILWKKNEVAD+EATTFSIFYNN LFL +VI SF++LK+F PT NYI S+ S+G +AL
Sbjct: 122 RILWKKNEVADYEATTFSIFYNNTLFLVLVIIASFFVLKNFNPTVNYILSISASSGLIAL 181
Query: 79 LSTGTK 84
LSTG+K
Sbjct: 182 LSTGSK 187
>UNIPROTKB|Q3SZ87 [details] [associations]
symbol:SSR3 "Translocon-associated protein subunit gamma"
species:9913 "Bos taurus" [GO:0030176 "integral to endoplasmic
reticulum membrane" evidence=IEA] [GO:0006613 "cotranslational
protein targeting to membrane" evidence=IEA] [GO:0005784 "Sec61
translocon complex" evidence=IEA] InterPro:IPR009779 Pfam:PF07074
GO:GO:0030176 GO:GO:0005784 GO:GO:0006613 EMBL:BC103053
IPI:IPI00707949 RefSeq:NP_001070512.1 UniGene:Bt.49088
STRING:Q3SZ87 PRIDE:Q3SZ87 Ensembl:ENSBTAT00000024583 GeneID:767980
KEGG:bta:767980 CTD:6747 eggNOG:NOG255012
GeneTree:ENSGT00390000000970 HOGENOM:HOG000007534
HOVERGEN:HBG012424 InParanoid:Q3SZ87 KO:K13251 OMA:TAYKNIK
OrthoDB:EOG4Z36FX NextBio:20918335 PANTHER:PTHR13399 Uniprot:Q3SZ87
Length = 185
Score = 251 (93.4 bits), Expect = 1.9e-21, P = 1.9e-21
Identities = 48/66 (72%), Positives = 56/66 (84%)
Query: 19 RILWKKNEVADFEATTFSIFYNNALFLAIVIFLSFYILKSFTPTFNYIFSLWISAGFLAL 78
RILWKKNEVAD+EATTFSIFYNN LFL +VI SF+ILK+F PT NYI S+ S+G +AL
Sbjct: 120 RILWKKNEVADYEATTFSIFYNNTLFLVLVIVASFFILKNFNPTVNYILSISASSGLIAL 179
Query: 79 LSTGTK 84
LSTG+K
Sbjct: 180 LSTGSK 185
>UNIPROTKB|E2R0K5 [details] [associations]
symbol:SSR3 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0030176 "integral to endoplasmic reticulum
membrane" evidence=IEA] [GO:0006613 "cotranslational protein
targeting to membrane" evidence=IEA] [GO:0005784 "Sec61 translocon
complex" evidence=IEA] InterPro:IPR009779 Pfam:PF07074
GO:GO:0030176 GO:GO:0005784 GO:GO:0006613 CTD:6747
GeneTree:ENSGT00390000000970 KO:K13251 OMA:TAYKNIK
PANTHER:PTHR13399 EMBL:AAEX03013706 RefSeq:XP_534317.2
ProteinModelPortal:E2R0K5 Ensembl:ENSCAFT00000014081 GeneID:477124
KEGG:cfa:477124 NextBio:20852659 Uniprot:E2R0K5
Length = 185
Score = 251 (93.4 bits), Expect = 1.9e-21, P = 1.9e-21
Identities = 48/66 (72%), Positives = 56/66 (84%)
Query: 19 RILWKKNEVADFEATTFSIFYNNALFLAIVIFLSFYILKSFTPTFNYIFSLWISAGFLAL 78
RILWKKNEVAD+EATTFSIFYNN LFL +VI SF+ILK+F PT NYI S+ S+G +AL
Sbjct: 120 RILWKKNEVADYEATTFSIFYNNTLFLVLVIVASFFILKNFNPTVNYILSISASSGLIAL 179
Query: 79 LSTGTK 84
LSTG+K
Sbjct: 180 LSTGSK 185
>UNIPROTKB|I3LGD6 [details] [associations]
symbol:SSR3 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0030176 "integral to endoplasmic reticulum membrane"
evidence=IEA] [GO:0006613 "cotranslational protein targeting to
membrane" evidence=IEA] [GO:0005784 "Sec61 translocon complex"
evidence=IEA] InterPro:IPR009779 Pfam:PF07074 GO:GO:0030176
GO:GO:0005784 GO:GO:0006613 CTD:6747 GeneTree:ENSGT00390000000970
KO:K13251 OMA:TAYKNIK PANTHER:PTHR13399 EMBL:FP236749 EMBL:FP236225
RefSeq:NP_001231076.1 UniGene:Ssc.2677 ProteinModelPortal:I3LGD6
Ensembl:ENSSSCT00000032102 GeneID:100625983 KEGG:ssc:100625983
Uniprot:I3LGD6
Length = 185
Score = 251 (93.4 bits), Expect = 1.9e-21, P = 1.9e-21
Identities = 48/66 (72%), Positives = 56/66 (84%)
Query: 19 RILWKKNEVADFEATTFSIFYNNALFLAIVIFLSFYILKSFTPTFNYIFSLWISAGFLAL 78
RILWKKNEVAD+EATTFSIFYNN LFL +VI SF+ILK+F PT NYI S+ S+G +AL
Sbjct: 120 RILWKKNEVADYEATTFSIFYNNTLFLVLVIVASFFILKNFNPTVNYILSISASSGLIAL 179
Query: 79 LSTGTK 84
LSTG+K
Sbjct: 180 LSTGSK 185
>MGI|MGI:1914687 [details] [associations]
symbol:Ssr3 "signal sequence receptor, gamma" species:10090
"Mus musculus" [GO:0005783 "endoplasmic reticulum" evidence=IEA]
[GO:0005784 "Sec61 translocon complex" evidence=IEA] [GO:0006613
"cotranslational protein targeting to membrane" evidence=IEA]
[GO:0016020 "membrane" evidence=IEA] [GO:0016021 "integral to
membrane" evidence=IEA] [GO:0030176 "integral to endoplasmic
reticulum membrane" evidence=IEA] InterPro:IPR009779 Pfam:PF07074
MGI:MGI:1914687 GO:GO:0030176 GO:GO:0005784 GO:GO:0006613 CTD:6747
eggNOG:NOG255012 GeneTree:ENSGT00390000000970 HOGENOM:HOG000007534
HOVERGEN:HBG012424 KO:K13251 OMA:TAYKNIK OrthoDB:EOG4Z36FX
PANTHER:PTHR13399 EMBL:AK002818 EMBL:AK029353 EMBL:AK076235
EMBL:AK088555 EMBL:BC011111 IPI:IPI00120826 IPI:IPI00458428
RefSeq:NP_080431.1 UniGene:Mm.232728 ProteinModelPortal:Q9DCF9
STRING:Q9DCF9 PhosphoSite:Q9DCF9 PaxDb:Q9DCF9 PRIDE:Q9DCF9
Ensembl:ENSMUST00000029414 Ensembl:ENSMUST00000119896 GeneID:67437
KEGG:mmu:67437 UCSC:uc008pko.1 InParanoid:Q9DCF9 NextBio:324562
Bgee:Q9DCF9 CleanEx:MM_SSR3 Genevestigator:Q9DCF9
GermOnline:ENSMUSG00000027828 Uniprot:Q9DCF9
Length = 185
Score = 251 (93.4 bits), Expect = 1.9e-21, P = 1.9e-21
Identities = 48/66 (72%), Positives = 56/66 (84%)
Query: 19 RILWKKNEVADFEATTFSIFYNNALFLAIVIFLSFYILKSFTPTFNYIFSLWISAGFLAL 78
RILWKKNEVAD+EATTFSIFYNN LFL +VI SF+ILK+F PT NYI S+ S+G +AL
Sbjct: 120 RILWKKNEVADYEATTFSIFYNNTLFLVLVIVASFFILKNFNPTVNYILSISASSGLIAL 179
Query: 79 LSTGTK 84
LSTG+K
Sbjct: 180 LSTGSK 185
>RGD|621630 [details] [associations]
symbol:Ssr3 "signal sequence receptor, gamma" species:10116
"Rattus norvegicus" [GO:0005784 "Sec61 translocon complex"
evidence=IEA;NAS] [GO:0006613 "cotranslational protein targeting to
membrane" evidence=IEA] [GO:0030176 "integral to endoplasmic
reticulum membrane" evidence=IEA] InterPro:IPR009779 Pfam:PF07074
RGD:621630 GO:GO:0030176 GO:GO:0005784 GO:GO:0006613 CTD:6747
eggNOG:NOG255012 HOVERGEN:HBG012424 KO:K13251 OrthoDB:EOG4Z36FX
PANTHER:PTHR13399 EMBL:Z14030 EMBL:BC062015 IPI:IPI00196589
PIR:S33294 RefSeq:NP_112382.2 UniGene:Rn.3264
ProteinModelPortal:Q08013 STRING:Q08013 PhosphoSite:Q08013
PRIDE:Q08013 GeneID:81784 KEGG:rno:81784 UCSC:RGD:621630
NextBio:615639 ArrayExpress:Q08013 Genevestigator:Q08013
Uniprot:Q08013
Length = 185
Score = 251 (93.4 bits), Expect = 1.9e-21, P = 1.9e-21
Identities = 48/66 (72%), Positives = 56/66 (84%)
Query: 19 RILWKKNEVADFEATTFSIFYNNALFLAIVIFLSFYILKSFTPTFNYIFSLWISAGFLAL 78
RILWKKNEVAD+EATTFSIFYNN LFL +VI SF+ILK+F PT NYI S+ S+G +AL
Sbjct: 120 RILWKKNEVADYEATTFSIFYNNTLFLVLVIVASFFILKNFNPTVNYILSISASSGLIAL 179
Query: 79 LSTGTK 84
LSTG+K
Sbjct: 180 LSTGSK 185
>UNIPROTKB|Q08013 [details] [associations]
symbol:Ssr3 "Translocon-associated protein subunit gamma"
species:10116 "Rattus norvegicus" [GO:0006613 "cotranslational
protein targeting to membrane" evidence=IEA] [GO:0030176 "integral
to endoplasmic reticulum membrane" evidence=IEA] InterPro:IPR009779
Pfam:PF07074 RGD:621630 GO:GO:0030176 GO:GO:0005784 GO:GO:0006613
CTD:6747 eggNOG:NOG255012 HOVERGEN:HBG012424 KO:K13251
OrthoDB:EOG4Z36FX PANTHER:PTHR13399 EMBL:Z14030 EMBL:BC062015
IPI:IPI00196589 PIR:S33294 RefSeq:NP_112382.2 UniGene:Rn.3264
ProteinModelPortal:Q08013 STRING:Q08013 PhosphoSite:Q08013
PRIDE:Q08013 GeneID:81784 KEGG:rno:81784 UCSC:RGD:621630
NextBio:615639 ArrayExpress:Q08013 Genevestigator:Q08013
Uniprot:Q08013
Length = 185
Score = 251 (93.4 bits), Expect = 1.9e-21, P = 1.9e-21
Identities = 48/66 (72%), Positives = 56/66 (84%)
Query: 19 RILWKKNEVADFEATTFSIFYNNALFLAIVIFLSFYILKSFTPTFNYIFSLWISAGFLAL 78
RILWKKNEVAD+EATTFSIFYNN LFL +VI SF+ILK+F PT NYI S+ S+G +AL
Sbjct: 120 RILWKKNEVADYEATTFSIFYNNTLFLVLVIVASFFILKNFNPTVNYILSISASSGLIAL 179
Query: 79 LSTGTK 84
LSTG+K
Sbjct: 180 LSTGSK 185
>ZFIN|ZDB-GENE-030131-9134 [details] [associations]
symbol:ssr3 "signal sequence receptor, gamma"
species:7955 "Danio rerio" [GO:0005784 "Sec61 translocon complex"
evidence=IEA] [GO:0006613 "cotranslational protein targeting to
membrane" evidence=IEA] [GO:0030176 "integral to endoplasmic
reticulum membrane" evidence=IEA] InterPro:IPR009779 Pfam:PF07074
ZFIN:ZDB-GENE-030131-9134 GO:GO:0030176 GO:GO:0005784 GO:GO:0006613
CTD:6747 GeneTree:ENSGT00390000000970 HOGENOM:HOG000007534
HOVERGEN:HBG012424 KO:K13251 OMA:TAYKNIK PANTHER:PTHR13399
EMBL:CR626922 EMBL:CU464135 EMBL:BC047859 IPI:IPI00513589
RefSeq:NP_956347.1 RefSeq:XP_003200516.1 RefSeq:XP_003200517.1
UniGene:Dr.297 STRING:Q7ZUR5 Ensembl:ENSDART00000021880
Ensembl:ENSDART00000122361 GeneID:100535344 GeneID:337190
KEGG:dre:100535344 KEGG:dre:337190 InParanoid:Q7ZUR5
NextBio:20812102 Uniprot:Q7ZUR5
Length = 185
Score = 248 (92.4 bits), Expect = 3.9e-21, P = 3.9e-21
Identities = 47/66 (71%), Positives = 56/66 (84%)
Query: 19 RILWKKNEVADFEATTFSIFYNNALFLAIVIFLSFYILKSFTPTFNYIFSLWISAGFLAL 78
RILWKKNEVAD+EATTFSIFYNN LFL +VI SF++LK+F PT NYI S+ S+G +AL
Sbjct: 120 RILWKKNEVADYEATTFSIFYNNTLFLLLVIVASFFLLKNFNPTVNYILSISASSGLIAL 179
Query: 79 LSTGTK 84
LSTG+K
Sbjct: 180 LSTGSK 185
>UNIPROTKB|B4E2P2 [details] [associations]
symbol:SSR3 "Translocon-associated protein subunit gamma"
species:9606 "Homo sapiens" [GO:0005784 "Sec61 translocon complex"
evidence=IEA] [GO:0006613 "cotranslational protein targeting to
membrane" evidence=IEA] [GO:0030176 "integral to endoplasmic
reticulum membrane" evidence=IEA] InterPro:IPR009779 Pfam:PF07074
GO:GO:0030176 GO:GO:0005784 GO:GO:0006613 HOGENOM:HOG000007534
HOVERGEN:HBG012424 OMA:TAYKNIK OrthoDB:EOG4Z36FX PANTHER:PTHR13399
UniGene:Hs.518346 HGNC:HGNC:11325 ChiTaRS:SSR3 EMBL:AC092927
EMBL:AK304364 IPI:IPI00946150 STRING:B4E2P2 Ensembl:ENST00000467789
UCSC:uc011bop.2 Uniprot:B4E2P2
Length = 198
Score = 247 (92.0 bits), Expect = 4.9e-21, P = 4.9e-21
Identities = 47/65 (72%), Positives = 55/65 (84%)
Query: 20 ILWKKNEVADFEATTFSIFYNNALFLAIVIFLSFYILKSFTPTFNYIFSLWISAGFLALL 79
ILWKKNEVAD+EATTFSIFYNN LFL +VI SF+ILK+F PT NYI S+ S+G +ALL
Sbjct: 134 ILWKKNEVADYEATTFSIFYNNTLFLVVVIVASFFILKNFNPTVNYILSISASSGLIALL 193
Query: 80 STGTK 84
STG+K
Sbjct: 194 STGSK 198
>FB|FBgn0025700 [details] [associations]
symbol:CG5885 species:7227 "Drosophila melanogaster"
[GO:0005784 "Sec61 translocon complex" evidence=ISS] [GO:0005786
"signal recognition particle, endoplasmic reticulum targeting"
evidence=ISS] [GO:0016021 "integral to membrane" evidence=ISS]
[GO:0006613 "cotranslational protein targeting to membrane"
evidence=IEA] [GO:0030176 "integral to endoplasmic reticulum
membrane" evidence=IEA] [GO:0005811 "lipid particle" evidence=IDA]
InterPro:IPR009779 Pfam:PF07074 EMBL:AE014134 GO:GO:0005811
GO:GO:0030176 GO:GO:0005784 GO:GO:0006613 eggNOG:NOG255012
GeneTree:ENSGT00390000000970 KO:K13251 OMA:TAYKNIK
PANTHER:PTHR13399 EMBL:AY118492 RefSeq:NP_609321.1 UniGene:Dm.11331
MINT:MINT-761886 STRING:Q9VL69 EnsemblMetazoa:FBtr0079900
GeneID:34314 KEGG:dme:Dmel_CG5885 UCSC:CG5885-RA
FlyBase:FBgn0025700 InParanoid:Q9VL69 OrthoDB:EOG415DWG
GenomeRNAi:34314 NextBio:787892 Uniprot:Q9VL69
Length = 190
Score = 245 (91.3 bits), Expect = 8.0e-21, P = 8.0e-21
Identities = 45/66 (68%), Positives = 58/66 (87%)
Query: 19 RILWKKNEVADFEATTFSIFYNNALFLAIVIFLSFYILKSFTPTFNYIFSLWISAGFLAL 78
RILWKKNEVAD+EATTFSIFYNNA++LA++IF+SF+ILK+ TP NYIFS+ I++G L+L
Sbjct: 123 RILWKKNEVADYEATTFSIFYNNAIYLAVIIFISFFILKNSTPFINYIFSVGIASGALSL 182
Query: 79 LSTGTK 84
ST +
Sbjct: 183 FSTSAQ 188
>UNIPROTKB|C9JA28 [details] [associations]
symbol:SSR3 "Translocon-associated protein subunit gamma"
species:9606 "Homo sapiens" [GO:0005784 "Sec61 translocon complex"
evidence=IEA] [GO:0006613 "cotranslational protein targeting to
membrane" evidence=IEA] [GO:0030176 "integral to endoplasmic
reticulum membrane" evidence=IEA] InterPro:IPR009779 Pfam:PF07074
GO:GO:0030176 GO:GO:0005784 GO:GO:0006613 HOGENOM:HOG000007534
PANTHER:PTHR13399 HGNC:HGNC:11325 ChiTaRS:SSR3 EMBL:AC092927
IPI:IPI00945960 ProteinModelPortal:C9JA28 STRING:C9JA28
Ensembl:ENST00000476217 ArrayExpress:C9JA28 Bgee:C9JA28
Uniprot:C9JA28
Length = 174
Score = 188 (71.2 bits), Expect = 8.8e-15, P = 8.8e-15
Identities = 35/44 (79%), Positives = 39/44 (88%)
Query: 19 RILWKKNEVADFEATTFSIFYNNALFLAIVIFLSFYILKSFTPT 62
RILWKKNEVAD+EATTFSIFYNN LFL +VI SF+ILK+F PT
Sbjct: 120 RILWKKNEVADYEATTFSIFYNNTLFLVVVIVASFFILKNFNPT 163
>WB|WBGene00021420 [details] [associations]
symbol:trap-3 species:6239 "Caenorhabditis elegans"
[GO:0005784 "Sec61 translocon complex" evidence=IEA] [GO:0006613
"cotranslational protein targeting to membrane" evidence=IEA]
[GO:0030176 "integral to endoplasmic reticulum membrane"
evidence=IEA] [GO:0016021 "integral to membrane" evidence=IEA]
InterPro:IPR009779 Pfam:PF07074 GO:GO:0030176 GO:GO:0005784
GO:GO:0006613 eggNOG:NOG255012 GeneTree:ENSGT00390000000970
HOGENOM:HOG000007534 KO:K13251 OMA:TAYKNIK PANTHER:PTHR13399
EMBL:FO080872 RefSeq:NP_500198.1 ProteinModelPortal:Q95XS1
STRING:Q95XS1 PaxDb:Q95XS1 EnsemblMetazoa:Y38F2AR.2.1
EnsemblMetazoa:Y38F2AR.2.2 GeneID:177028 KEGG:cel:CELE_Y38F2AR.2
UCSC:Y38F2AR.2.1 CTD:177028 WormBase:Y38F2AR.2 InParanoid:Q95XS1
NextBio:895032 Uniprot:Q95XS1
Length = 178
Score = 153 (58.9 bits), Expect = 4.5e-11, P = 4.5e-11
Identities = 30/63 (47%), Positives = 44/63 (69%)
Query: 19 RILWKKNEVADFEATTFSIFYNNALFLAIVIFLSFYILKSFTPTFNYIFSLWISAGFLAL 78
R L++KNEVAD E+T S+FY N+L+L I++ +F++L + P FN + S SAG +A
Sbjct: 113 RALFRKNEVADTESTYLSVFYTNSLYLTIMLVSAFFLLANVAPVFNLLISTIGSAGLVAF 172
Query: 79 LST 81
LST
Sbjct: 173 LST 175
>DICTYBASE|DDB_G0267524 [details] [associations]
symbol:ssr3 "translocon-associated protein TRAP gamma
subunit" species:44689 "Dictyostelium discoideum" [GO:0030176
"integral to endoplasmic reticulum membrane" evidence=IEA]
[GO:0006613 "cotranslational protein targeting to membrane"
evidence=IEA] [GO:0005784 "Sec61 translocon complex" evidence=IEA]
[GO:0016021 "integral to membrane" evidence=IEA] [GO:0016020
"membrane" evidence=IEA] [GO:0005783 "endoplasmic reticulum"
evidence=IEA] [GO:0005789 "endoplasmic reticulum membrane"
evidence=IEA] [GO:0044351 "macropinocytosis" evidence=RCA]
InterPro:IPR009779 Pfam:PF07074 dictyBase:DDB_G0267524
GenomeReviews:CM000150_GR EMBL:AAFI02000003 GO:GO:0030176
GO:GO:0005784 GO:GO:0006613 eggNOG:NOG255012 KO:K13251
PANTHER:PTHR13399 RefSeq:XP_647099.1 STRING:Q55GT5
EnsemblProtists:DDB0266493 GeneID:8615903 KEGG:ddi:DDB_G0267524
OMA:FAYNNIY ProtClustDB:CLSZ2846942 Uniprot:Q55GT5
Length = 170
Score = 119 (46.9 bits), Expect = 1.8e-07, P = 1.8e-07
Identities = 26/58 (44%), Positives = 33/58 (56%)
Query: 27 VADFEATTFSIFYNNALFLAIVIFLSFYILKSFTPTFNYIFSLWISAGFLALLSTGTK 84
V EA SI YNNA+FL V SF I K+ +NYI S+ + AG + LST +K
Sbjct: 112 VTSHEAIAASIMYNNAVFLICVSIFSFIIFKNVPLVYNYIISISLGAGLTSFLSTSSK 169
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.332 0.141 0.433 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 84 68 0.00091 102 3 11 21 0.47 27
29 0.38 29
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 15
No. of states in DFA: 463 (49 KB)
Total size of DFA: 88 KB (2067 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 9.79u 0.14s 9.93t Elapsed: 00:00:00
Total cpu time: 9.80u 0.14s 9.94t Elapsed: 00:00:00
Start: Thu Aug 15 15:27:03 2013 End: Thu Aug 15 15:27:03 2013