BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy12748
(125 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|4GV1|A Chain A, Pkb Alpha In Complex With Azd5363
Length = 340
Score = 62.4 bits (150), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 28/69 (40%), Positives = 40/69 (57%), Gaps = 3/69 (4%)
Query: 2 GVDWWALGVCIYEFVTGVLPFSDETPQKVFDNILANQLEWPEDEEALNPSTEETILALLK 61
VDWW LGV +YE + G LPF ++ +K+F+ IL ++ +P L P + + LLK
Sbjct: 189 AVDWWGLGVVMYEMMCGRLPFYNQDHEKLFELILMEEIRFP---RTLGPEAKSLLSGLLK 245
Query: 62 SDPTQRPSG 70
DP QR G
Sbjct: 246 KDPKQRLGG 254
>pdb|3OCB|A Chain A, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor
pdb|3OCB|B Chain B, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor
pdb|3OW4|A Chain A, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|3OW4|B Chain B, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|3QKK|A Chain A, Spirochromane Akt Inhibitors
pdb|3QKL|A Chain A, Spirochromane Akt Inhibitors
pdb|3QKM|A Chain A, Spirocyclic Sulfonamides As Akt Inhibitors
pdb|4EKK|A Chain A, Akt1 With Amp-Pnp
pdb|4EKK|B Chain B, Akt1 With Amp-Pnp
pdb|4EKL|A Chain A, Akt1 With Gdc0068
Length = 341
Score = 62.4 bits (150), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 28/69 (40%), Positives = 40/69 (57%), Gaps = 3/69 (4%)
Query: 2 GVDWWALGVCIYEFVTGVLPFSDETPQKVFDNILANQLEWPEDEEALNPSTEETILALLK 61
VDWW LGV +YE + G LPF ++ +K+F+ IL ++ +P L P + + LLK
Sbjct: 190 AVDWWGLGVVMYEMMCGRLPFYNQDHEKLFELILMEEIRFP---RTLGPEAKSLLSGLLK 246
Query: 62 SDPTQRPSG 70
DP QR G
Sbjct: 247 KDPKQRLGG 255
>pdb|3CQU|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate
Peptide And Inhibitor
pdb|3CQW|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate
Peptide And Inhibitor
pdb|3MV5|A Chain A, Crystal Structure Of Akt-1-Inhibitor Complexes
pdb|3MVH|A Chain A, Crystal Structure Of Akt-1-Inhibitor Complexes
Length = 342
Score = 62.4 bits (150), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 28/69 (40%), Positives = 40/69 (57%), Gaps = 3/69 (4%)
Query: 2 GVDWWALGVCIYEFVTGVLPFSDETPQKVFDNILANQLEWPEDEEALNPSTEETILALLK 61
VDWW LGV +YE + G LPF ++ +K+F+ IL ++ +P L P + + LLK
Sbjct: 191 AVDWWGLGVVMYEMMCGRLPFYNQDHEKLFELILMEEIRFP---RTLGPEAKSLLSGLLK 247
Query: 62 SDPTQRPSG 70
DP QR G
Sbjct: 248 KDPKQRLGG 256
>pdb|1MRV|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
pdb|1MRY|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
Length = 339
Score = 62.4 bits (150), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 27/69 (39%), Positives = 41/69 (59%), Gaps = 3/69 (4%)
Query: 2 GVDWWALGVCIYEFVTGVLPFSDETPQKVFDNILANQLEWPEDEEALNPSTEETILALLK 61
VDWW LGV +YE + G LPF ++ +++F+ IL ++ +P L+P + + LLK
Sbjct: 188 AVDWWGLGVVMYEMMCGRLPFYNQDHERLFELILMEEIRFP---RTLSPEAKSLLAGLLK 244
Query: 62 SDPTQRPSG 70
DP QR G
Sbjct: 245 KDPKQRLGG 253
>pdb|3E87|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E87|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3D0E|A Chain A, Crystal Structure Of Human Akt2 In Complex With Gsk690693
pdb|3D0E|B Chain B, Crystal Structure Of Human Akt2 In Complex With Gsk690693
Length = 335
Score = 62.4 bits (150), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 27/69 (39%), Positives = 41/69 (59%), Gaps = 3/69 (4%)
Query: 2 GVDWWALGVCIYEFVTGVLPFSDETPQKVFDNILANQLEWPEDEEALNPSTEETILALLK 61
VDWW LGV +YE + G LPF ++ +++F+ IL ++ +P L+P + + LLK
Sbjct: 185 AVDWWGLGVVMYEMMCGRLPFYNQDHERLFELILMEEIRFP---RTLSPEAKSLLAGLLK 241
Query: 62 SDPTQRPSG 70
DP QR G
Sbjct: 242 KDPKQRLGG 250
>pdb|1GZN|A Chain A, Structure Of Pkb Kinase Domain
Length = 335
Score = 62.4 bits (150), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 27/69 (39%), Positives = 41/69 (59%), Gaps = 3/69 (4%)
Query: 2 GVDWWALGVCIYEFVTGVLPFSDETPQKVFDNILANQLEWPEDEEALNPSTEETILALLK 61
VDWW LGV +YE + G LPF ++ +++F+ IL ++ +P L+P + + LLK
Sbjct: 185 AVDWWGLGVVMYEMMCGRLPFYNQDHERLFELILMEEIRFP---RTLSPEAKSLLAGLLK 241
Query: 62 SDPTQRPSG 70
DP QR G
Sbjct: 242 KDPKQRLGG 250
>pdb|1O6K|A Chain A, Structure Of Activated Form Of Pkb Kinase Domain S474d
With Gsk3 Peptide And Amp-Pnp
Length = 336
Score = 62.4 bits (150), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 27/69 (39%), Positives = 41/69 (59%), Gaps = 3/69 (4%)
Query: 2 GVDWWALGVCIYEFVTGVLPFSDETPQKVFDNILANQLEWPEDEEALNPSTEETILALLK 61
VDWW LGV +YE + G LPF ++ +++F+ IL ++ +P L+P + + LLK
Sbjct: 185 AVDWWGLGVVMYEMMCGRLPFYNQDHERLFELILMEEIRFP---RTLSPEAKSLLAGLLK 241
Query: 62 SDPTQRPSG 70
DP QR G
Sbjct: 242 KDPKQRLGG 250
>pdb|1O6L|A Chain A, Crystal Structure Of An Activated Akt/protein Kinase B
(pkb-pif Chimera) Ternary Complex With Amp-pnp And Gsk3
Peptide
Length = 337
Score = 62.4 bits (150), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 27/69 (39%), Positives = 41/69 (59%), Gaps = 3/69 (4%)
Query: 2 GVDWWALGVCIYEFVTGVLPFSDETPQKVFDNILANQLEWPEDEEALNPSTEETILALLK 61
VDWW LGV +YE + G LPF ++ +++F+ IL ++ +P L+P + + LLK
Sbjct: 185 AVDWWGLGVVMYEMMCGRLPFYNQDHERLFELILMEEIRFP---RTLSPEAKSLLAGLLK 241
Query: 62 SDPTQRPSG 70
DP QR G
Sbjct: 242 KDPKQRLGG 250
>pdb|1GZK|A Chain A, Molecular Mechanism For The Regulation Of Protein Kinase B
Akt By Hydrophobic Motif Phosphorylation
pdb|1GZO|A Chain A, Structure Of Protein Kinase B Unphosphorylated
Length = 315
Score = 62.4 bits (150), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 27/69 (39%), Positives = 41/69 (59%), Gaps = 3/69 (4%)
Query: 2 GVDWWALGVCIYEFVTGVLPFSDETPQKVFDNILANQLEWPEDEEALNPSTEETILALLK 61
VDWW LGV +YE + G LPF ++ +++F+ IL ++ +P L+P + + LLK
Sbjct: 185 AVDWWGLGVVMYEMMCGRLPFYNQDHERLFELILMEEIRFP---RTLSPEAKSLLAGLLK 241
Query: 62 SDPTQRPSG 70
DP QR G
Sbjct: 242 KDPKQRLGG 250
>pdb|2JDO|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With
Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl) Amide
pdb|2JDR|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With The Inhibitor
A- 443654
pdb|2UW9|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With 4-(4-Chloro-
Phenyl)-4-(4-(1h-Pyrazol-4-Yl)-Phenyl)-Piperidine
pdb|2X39|A Chain A, Structure Of
4-Amino-N-(4-Chlorobenzyl)-1-(7h-Pyrrolo(2,3-D)
Pyrimidin-4-Yl)piperidine-4-Carboxamide Bound To Pkb
pdb|2XH5|A Chain A, Structure Of 4-(4-Tert-Butylbenzyl)-1-(7h-Pyrrolo(2,3-D)
Pyrimidin-4-Yl)piperidin-4-Amine Bound To Pkb
Length = 342
Score = 62.0 bits (149), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 27/69 (39%), Positives = 41/69 (59%), Gaps = 3/69 (4%)
Query: 2 GVDWWALGVCIYEFVTGVLPFSDETPQKVFDNILANQLEWPEDEEALNPSTEETILALLK 61
VDWW LGV +YE + G LPF ++ +++F+ IL ++ +P L+P + + LLK
Sbjct: 190 AVDWWGLGVVMYEMMCGRLPFYNQDHERLFELILMEEIRFP---RTLSPEAKSLLAGLLK 246
Query: 62 SDPTQRPSG 70
DP QR G
Sbjct: 247 KDPKQRLGG 255
>pdb|4EJN|A Chain A, Crystal Structure Of Autoinhibited Form Of Akt1 In Complex
With N-(4-
(5-(3-Acetamidophenyl)-2-(2-Aminopyridin-3-Yl)-3h-
Imidazo[4,5- B]pyridin-3-Yl)benzyl)-3-Fluorobenzamide
Length = 446
Score = 61.6 bits (148), Expect = 1e-10, Method: Composition-based stats.
Identities = 28/69 (40%), Positives = 40/69 (57%), Gaps = 3/69 (4%)
Query: 2 GVDWWALGVCIYEFVTGVLPFSDETPQKVFDNILANQLEWPEDEEALNPSTEETILALLK 61
VDWW LGV +YE + G LPF ++ +K+F+ IL ++ +P L P + + LLK
Sbjct: 329 AVDWWGLGVVMYEMMCGRLPFYNQDHEKLFELILMEEIRFP---RTLGPEAKSLLSGLLK 385
Query: 62 SDPTQRPSG 70
DP QR G
Sbjct: 386 KDPKQRLGG 394
>pdb|3O96|A Chain A, Crystal Structure Of Human Akt1 With An Allosteric
Inhibitor
Length = 446
Score = 61.2 bits (147), Expect = 1e-10, Method: Composition-based stats.
Identities = 28/69 (40%), Positives = 40/69 (57%), Gaps = 3/69 (4%)
Query: 2 GVDWWALGVCIYEFVTGVLPFSDETPQKVFDNILANQLEWPEDEEALNPSTEETILALLK 61
VDWW LGV +YE + G LPF ++ +K+F+ IL ++ +P L P + + LLK
Sbjct: 332 AVDWWGLGVVMYEMMCGRLPFYNQDHEKLFELILMEEIRFP---RTLGPEAKSLLSGLLK 388
Query: 62 SDPTQRPSG 70
DP QR G
Sbjct: 389 KDPKQRLGG 397
>pdb|3UBD|A Chain A, Structure Of N-Terminal Domain Of Rsk2 Kinase In Complex
With Flavonoid Glycoside Sl0101
Length = 304
Score = 53.9 bits (128), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 27/90 (30%), Positives = 45/90 (50%), Gaps = 8/90 (8%)
Query: 3 VDWWALGVCIYEFVTGVLPFSDETPQKVFDNILANQLEWPEDEEALNPSTEETILALLKS 62
DWW+ GV ++E +TG LPF + ++ IL +L P + L+P + + L K
Sbjct: 207 ADWWSFGVLMFEMLTGTLPFQGKDRKETMTMILKAKLGMP---QFLSPEAQSLLRMLFKR 263
Query: 63 DPTQR----PSG-HQVRRLPMFKDYDWDSI 87
+P R P G +++R F DW+ +
Sbjct: 264 NPANRLGAGPDGVEEIKRHSFFSTIDWNKL 293
>pdb|4EL9|A Chain A, Structure Of N-Terminal Kinase Domain Of Rsk2 With Afzelin
pdb|4GUE|A Chain A, Structure Of N-terminal Kinase Domain Of Rsk2 With
Flavonoid Glycoside Quercitrin
Length = 305
Score = 53.9 bits (128), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 27/90 (30%), Positives = 45/90 (50%), Gaps = 8/90 (8%)
Query: 3 VDWWALGVCIYEFVTGVLPFSDETPQKVFDNILANQLEWPEDEEALNPSTEETILALLKS 62
DWW+ GV ++E +TG LPF + ++ IL +L P + L+P + + L K
Sbjct: 208 ADWWSFGVLMFEMLTGTLPFQGKDRKETMTMILKAKLGMP---QFLSPEAQSLLRMLFKR 264
Query: 63 DPTQR----PSG-HQVRRLPMFKDYDWDSI 87
+P R P G +++R F DW+ +
Sbjct: 265 NPANRLGAGPDGVEEIKRHSFFSTIDWNKL 294
>pdb|3G51|A Chain A, Structural Diversity Of The Active Conformation Of The N-
Terminal Kinase Domain Of P90 Ribosomal S6 Kinase 2
Length = 325
Score = 53.9 bits (128), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 27/90 (30%), Positives = 45/90 (50%), Gaps = 8/90 (8%)
Query: 3 VDWWALGVCIYEFVTGVLPFSDETPQKVFDNILANQLEWPEDEEALNPSTEETILALLKS 62
DWW+ GV ++E +TG LPF + ++ IL +L P + L+P + + L K
Sbjct: 207 ADWWSFGVLMFEMLTGTLPFQGKDRKETMTMILKAKLGMP---QFLSPEAQSLLRMLFKR 263
Query: 63 DPTQR----PSG-HQVRRLPMFKDYDWDSI 87
+P R P G +++R F DW+ +
Sbjct: 264 NPANRLGAGPDGVEEIKRHSFFSTIDWNKL 293
>pdb|3TXO|A Chain A, Pkc Eta Kinase In Complex With A Naphthyridine
Length = 353
Score = 53.9 bits (128), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 28/89 (31%), Positives = 44/89 (49%), Gaps = 9/89 (10%)
Query: 2 GVDWWALGVCIYEFVTGVLPFSDETPQKVFDNILANQLEWPEDEEALNPSTEETILALLK 61
VDWWA+GV +YE + G PF E +F+ IL +++ +P L+ + + +
Sbjct: 204 AVDWWAMGVLLYEMLCGHAPFEAENEDDLFEAILNDEVVYP---TWLHEDATGILKSFMT 260
Query: 62 SDPTQRPSG------HQVRRLPMFKDYDW 84
+PT R H + R P FK+ DW
Sbjct: 261 KNPTMRLGSLTQGGEHAILRHPFFKEIDW 289
>pdb|1FOT|A Chain A, Structure Of The Unliganded Camp-Dependent Protein Kinase
Catalytic Subunit From Saccharomyces Cerevisiae
Length = 318
Score = 53.5 bits (127), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 28/93 (30%), Positives = 45/93 (48%), Gaps = 8/93 (8%)
Query: 1 SGVDWWALGVCIYEFVTGVLPFSDETPQKVFDNILANQLEWPEDEEALNPSTEETILALL 60
+DWW+ G+ IYE + G PF D K ++ IL +L +P N ++ + L+
Sbjct: 182 KSIDWWSFGILIYEMLAGYTPFYDSNTMKTYEKILNAELRFP---PFFNEDVKDLLSRLI 238
Query: 61 KSDPTQRPSGHQ-----VRRLPMFKDYDWDSIL 88
D +QR Q V+ P FK+ W+ +L
Sbjct: 239 TRDLSQRLGNLQNGTEDVKNHPWFKEVVWEKLL 271
>pdb|3A62|A Chain A, Crystal Structure Of Phosphorylated P70s6k1
Length = 327
Score = 52.4 bits (124), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 28/91 (30%), Positives = 44/91 (48%), Gaps = 8/91 (8%)
Query: 3 VDWWALGVCIYEFVTGVLPFSDETPQKVFDNILANQLEWPEDEEALNPSTEETILALLKS 62
VDWW+LG +Y+ +TG PF+ E +K D IL +L P L + + LLK
Sbjct: 202 VDWWSLGALMYDMLTGAPPFTGENRKKTIDKILKCKLNLP---PYLTQEARDLLKKLLKR 258
Query: 63 DPTQR-----PSGHQVRRLPMFKDYDWDSIL 88
+ R +V+ P F+ +W+ +L
Sbjct: 259 NAASRLGAGPGDAGEVQAHPFFRHINWEELL 289
>pdb|3A60|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A60|B Chain B, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A61|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form Ii)
Length = 327
Score = 52.4 bits (124), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 28/91 (30%), Positives = 44/91 (48%), Gaps = 8/91 (8%)
Query: 3 VDWWALGVCIYEFVTGVLPFSDETPQKVFDNILANQLEWPEDEEALNPSTEETILALLKS 62
VDWW+LG +Y+ +TG PF+ E +K D IL +L P L + + LLK
Sbjct: 202 VDWWSLGALMYDMLTGAPPFTGENRKKTIDKILKCKLNLP---PYLTQEARDLLKKLLKR 258
Query: 63 DPTQR-----PSGHQVRRLPMFKDYDWDSIL 88
+ R +V+ P F+ +W+ +L
Sbjct: 259 NAASRLGAGPGDAGEVQAHPFFRHINWEELL 289
>pdb|3IW4|A Chain A, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|B Chain B, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|C Chain C, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
Length = 360
Score = 50.8 bits (120), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 27/90 (30%), Positives = 45/90 (50%), Gaps = 8/90 (8%)
Query: 3 VDWWALGVCIYEFVTGVLPFSDETPQKVFDNILANQLEWPEDEEALNPSTEETILALLKS 62
VDWWA GV +YE + G PF E ++F +I+ + + +P ++L+ L+
Sbjct: 201 VDWWAYGVLLYEMLAGQPPFDGEDEDELFQSIMEHNVSYP---KSLSKEAVSICKGLMTK 257
Query: 63 DPTQR----PSGHQ-VRRLPMFKDYDWDSI 87
P +R P G + VR F+ DW+ +
Sbjct: 258 HPAKRLGCGPEGERDVREHAFFRRIDWEKL 287
>pdb|2QUR|A Chain A, Crystal Structure Of F327aK285P MUTANT OF CAMP-Dependent
Protein Kinase
Length = 350
Score = 50.4 bits (119), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 28/92 (30%), Positives = 49/92 (53%), Gaps = 8/92 (8%)
Query: 1 SGVDWWALGVCIYEFVTGVLPFSDETPQKVFDNILANQLEWPEDEEALNPSTEETILALL 60
VDWWALGV IYE G PF + P ++++ I++ ++ +P + ++ + LL
Sbjct: 217 KAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSH---FSSDLKDLLRNLL 273
Query: 61 KSDPTQR----PSG-HQVRRLPMFKDYDWDSI 87
+ D T+R P+G + ++ F DW +I
Sbjct: 274 QVDLTKRFGNLPNGVNDIKNHKWFATTDWIAI 305
>pdb|2Z7Q|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk-1 Bound To Amp-Pcp
pdb|2Z7R|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Staurosporine
pdb|2Z7S|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Purvalnol A
Length = 321
Score = 48.9 bits (115), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 26/90 (28%), Positives = 45/90 (50%), Gaps = 8/90 (8%)
Query: 3 VDWWALGVCIYEFVTGVLPFSDETPQKVFDNILANQLEWPEDEEALNPSTEETILALLKS 62
DWW+ GV ++E +TG LPF + ++ IL +L P + L+ + + AL K
Sbjct: 211 ADWWSYGVLMFEMLTGSLPFQGKDRKETMTLILKAKLGMP---QFLSTEAQSLLRALFKR 267
Query: 63 DPTQR----PSG-HQVRRLPMFKDYDWDSI 87
+P R P G +++R + DW+ +
Sbjct: 268 NPANRLGSGPDGAEEIKRHVFYSTIDWNKL 297
>pdb|3PFQ|A Chain A, Crystal Structure And Allosteric Activation Of Protein
Kinase C Beta Ii
Length = 674
Score = 48.9 bits (115), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 24/90 (26%), Positives = 45/90 (50%), Gaps = 8/90 (8%)
Query: 3 VDWWALGVCIYEFVTGVLPFSDETPQKVFDNILANQLEWPEDEEALNPSTEETILALLKS 62
VDWWA GV +YE + G PF E ++F +I+ + + +P ++++ L+
Sbjct: 523 VDWWAFGVLLYEMLAGQAPFEGEDEDELFQSIMEHNVAYP---KSMSKEAVAICKGLMTK 579
Query: 63 DPTQR----PSGHQ-VRRLPMFKDYDWDSI 87
P +R P G + ++ F+ DW+ +
Sbjct: 580 HPGKRLGCGPEGERDIKEHAFFRYIDWEKL 609
>pdb|2I0E|A Chain A, Structure Of Catalytic Domain Of Human Protein Kinase C
Beta Ii Complexed With A Bisindolylmaleimide Inhibitor
pdb|2I0E|B Chain B, Structure Of Catalytic Domain Of Human Protein Kinase C
Beta Ii Complexed With A Bisindolylmaleimide Inhibitor
Length = 353
Score = 48.9 bits (115), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 24/90 (26%), Positives = 45/90 (50%), Gaps = 8/90 (8%)
Query: 3 VDWWALGVCIYEFVTGVLPFSDETPQKVFDNILANQLEWPEDEEALNPSTEETILALLKS 62
VDWWA GV +YE + G PF E ++F +I+ + + +P ++++ L+
Sbjct: 202 VDWWAFGVLLYEMLAGQAPFEGEDEDELFQSIMEHNVAYP---KSMSKEAVAICKGLMTK 258
Query: 63 DPTQR----PSGHQ-VRRLPMFKDYDWDSI 87
P +R P G + ++ F+ DW+ +
Sbjct: 259 HPGKRLGCGPEGERDIKEHAFFRYIDWEKL 288
>pdb|4DC2|A Chain A, Structure Of Pkc In Complex With A Substrate Peptide From
Par-3
Length = 396
Score = 48.5 bits (114), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 30/100 (30%), Positives = 47/100 (47%), Gaps = 18/100 (18%)
Query: 3 VDWWALGVCIYEFVTGVLPF----SDETPQK-----VFDNILANQLEWPEDEEALNPSTE 53
VDWWALGV ++E + G PF S + P + +F IL Q+ P +L+
Sbjct: 234 VDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLFQVILEKQIRIP---RSLSVKAA 290
Query: 54 ETILALLKSDPTQRPSGH------QVRRLPMFKDYDWDSI 87
+ + L DP +R H ++ P F++ DWD +
Sbjct: 291 SVLKSFLNKDPKERLGCHPQTGFADIQGHPFFRNVDWDMM 330
>pdb|2GNF|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase With
Y- 27632
Length = 350
Score = 48.5 bits (114), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 22/67 (32%), Positives = 38/67 (56%), Gaps = 3/67 (4%)
Query: 1 SGVDWWALGVCIYEFVTGVLPFSDETPQKVFDNILANQLEWPEDEEALNPSTEETILALL 60
VDWWALGV IYE G PF + P ++++ I++ ++ +P + ++ + LL
Sbjct: 217 KAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSH---FSSDLKDLLRNLL 273
Query: 61 KSDPTQR 67
+ D T+R
Sbjct: 274 QVDLTKR 280
>pdb|1YDT|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H89 Protein
Kinase Inhibitor N-[2-
(4-Bromocinnamylamino)ethyl]-5-Isoquinoline
pdb|1YDR|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H7 Protein
Kinase Inhibitor 1-(5-
Isoquinolinesulfonyl)-2-Methylpiperazine
pdb|1YDS|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H8 Protein
Kinase Inhibitor [n-(2-Methylamino)ethyl]-5-
Isoquinolinesulfonamide
Length = 350
Score = 48.5 bits (114), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 22/67 (32%), Positives = 38/67 (56%), Gaps = 3/67 (4%)
Query: 1 SGVDWWALGVCIYEFVTGVLPFSDETPQKVFDNILANQLEWPEDEEALNPSTEETILALL 60
VDWWALGV IYE G PF + P ++++ I++ ++ +P + ++ + LL
Sbjct: 217 KAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSH---FSSDLKDLLRNLL 273
Query: 61 KSDPTQR 67
+ D T+R
Sbjct: 274 QVDLTKR 280
>pdb|4AE9|A Chain A, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2
pdb|4AE9|B Chain B, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2
Length = 343
Score = 48.5 bits (114), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 22/67 (32%), Positives = 38/67 (56%), Gaps = 3/67 (4%)
Query: 1 SGVDWWALGVCIYEFVTGVLPFSDETPQKVFDNILANQLEWPEDEEALNPSTEETILALL 60
VDWWALGV IYE G PF + P ++++ I++ ++ +P + ++ + LL
Sbjct: 210 KAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSH---FSSDLKDLLRNLL 266
Query: 61 KSDPTQR 67
+ D T+R
Sbjct: 267 QVDLTKR 273
>pdb|2GNG|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase
pdb|2GNH|A Chain A, Pka Five Fold Mutant Model Of Rho-Kinase With H1152p
pdb|2GNI|A Chain A, Pka Fivefold Mutant Model Of Rho-Kinase With Inhibitor
Fasudil (Ha1077)
Length = 350
Score = 48.5 bits (114), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 22/67 (32%), Positives = 38/67 (56%), Gaps = 3/67 (4%)
Query: 1 SGVDWWALGVCIYEFVTGVLPFSDETPQKVFDNILANQLEWPEDEEALNPSTEETILALL 60
VDWWALGV IYE G PF + P ++++ I++ ++ +P + ++ + LL
Sbjct: 217 KAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSH---FSSDLKDLLRNLL 273
Query: 61 KSDPTQR 67
+ D T+R
Sbjct: 274 QVDLTKR 280
>pdb|3AMA|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With
Inhibitor Jnj- 7706621
pdb|3AMB|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With
Inhibitor Vx- 680
Length = 351
Score = 48.5 bits (114), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 22/67 (32%), Positives = 38/67 (56%), Gaps = 3/67 (4%)
Query: 1 SGVDWWALGVCIYEFVTGVLPFSDETPQKVFDNILANQLEWPEDEEALNPSTEETILALL 60
VDWWALGV IYE G PF + P ++++ I++ ++ +P + ++ + LL
Sbjct: 218 KAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSH---FSSDLKDLLRNLL 274
Query: 61 KSDPTQR 67
+ D T+R
Sbjct: 275 QVDLTKR 281
>pdb|3MVJ|A Chain A, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
pdb|3MVJ|B Chain B, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
pdb|3MVJ|E Chain E, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
Length = 371
Score = 48.5 bits (114), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 22/67 (32%), Positives = 38/67 (56%), Gaps = 3/67 (4%)
Query: 1 SGVDWWALGVCIYEFVTGVLPFSDETPQKVFDNILANQLEWPEDEEALNPSTEETILALL 60
VDWWALGV IYE G PF + P ++++ I++ ++ +P + ++ + LL
Sbjct: 238 KAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSH---FSSDLKDLLRNLL 294
Query: 61 KSDPTQR 67
+ D T+R
Sbjct: 295 QVDLTKR 301
>pdb|2GU8|A Chain A, Discovery Of 2-pyrimidyl-5-amidothiophenes As Novel And
Potent Inhibitors For Akt: Synthesis And Sar Studies
Length = 337
Score = 48.5 bits (114), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 22/67 (32%), Positives = 38/67 (56%), Gaps = 3/67 (4%)
Query: 1 SGVDWWALGVCIYEFVTGVLPFSDETPQKVFDNILANQLEWPEDEEALNPSTEETILALL 60
VDWWALGV IYE G PF + P ++++ I++ ++ +P + ++ + LL
Sbjct: 204 KAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSH---FSSDLKDLLRNLL 260
Query: 61 KSDPTQR 67
+ D T+R
Sbjct: 261 QVDLTKR 267
>pdb|2JDT|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl) Amide
pdb|2JDV|A Chain A, Structure Of Pka-Pkb Chimera Complexed With A-443654
pdb|2UVX|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 7-Azaindole
pdb|2UW4|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
2-(4-(5-Methyl- 1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW7|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 4-(4-Chloro-
Phenyl)-4-(4-(1h-Pyrazol-4-Yl)-Phenyl)-Piperidine
pdb|4AXA|A Chain A, Structure Of Pka-pkb Chimera Complexed With
(1s)-2-amino-1-(
4-chlorophenyl)-1-(4-(1h-pyrazol-4-yl)phenyl)ethan-1-ol
Length = 351
Score = 48.5 bits (114), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 22/67 (32%), Positives = 38/67 (56%), Gaps = 3/67 (4%)
Query: 1 SGVDWWALGVCIYEFVTGVLPFSDETPQKVFDNILANQLEWPEDEEALNPSTEETILALL 60
VDWWALGV IYE G PF + P ++++ I++ ++ +P + ++ + LL
Sbjct: 218 KAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSH---FSSDLKDLLRNLL 274
Query: 61 KSDPTQR 67
+ D T+R
Sbjct: 275 QVDLTKR 281
>pdb|3L9M|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 18
pdb|3L9M|B Chain B, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 18
pdb|3L9N|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 27
Length = 351
Score = 48.5 bits (114), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 22/67 (32%), Positives = 38/67 (56%), Gaps = 3/67 (4%)
Query: 1 SGVDWWALGVCIYEFVTGVLPFSDETPQKVFDNILANQLEWPEDEEALNPSTEETILALL 60
VDWWALGV IYE G PF + P ++++ I++ ++ +P + ++ + LL
Sbjct: 218 KAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSH---FSSDLKDLLRNLL 274
Query: 61 KSDPTQR 67
+ D T+R
Sbjct: 275 QVDLTKR 281
>pdb|1Q8W|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In
Complex With Rho-Kinase Inhibitor Fasudil (Ha-1077)
pdb|1XH4|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|3BWJ|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Lead Compound Arc-1034
pdb|3KKV|A Chain A, Structure Of Pka With A Protein Kinase B-Selective
Inhibitor
Length = 350
Score = 48.5 bits (114), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 22/67 (32%), Positives = 38/67 (56%), Gaps = 3/67 (4%)
Query: 1 SGVDWWALGVCIYEFVTGVLPFSDETPQKVFDNILANQLEWPEDEEALNPSTEETILALL 60
VDWWALGV IYE G PF + P ++++ I++ ++ +P + ++ + LL
Sbjct: 217 KAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSH---FSSDLKDLLRNLL 273
Query: 61 KSDPTQR 67
+ D T+R
Sbjct: 274 QVDLTKR 280
>pdb|4AE6|A Chain A, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit Calpha 2
pdb|4AE6|B Chain B, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit Calpha 2
Length = 343
Score = 48.5 bits (114), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 22/67 (32%), Positives = 38/67 (56%), Gaps = 3/67 (4%)
Query: 1 SGVDWWALGVCIYEFVTGVLPFSDETPQKVFDNILANQLEWPEDEEALNPSTEETILALL 60
VDWWALGV IYE G PF + P ++++ I++ ++ +P + ++ + LL
Sbjct: 210 KAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSH---FSSDLKDLLRNLL 266
Query: 61 KSDPTQR 67
+ D T+R
Sbjct: 267 QVDLTKR 273
>pdb|3NX8|A Chain A, Human Camp Dependent Protein Kinase In Complex With Phenol
Length = 351
Score = 48.5 bits (114), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 22/67 (32%), Positives = 38/67 (56%), Gaps = 3/67 (4%)
Query: 1 SGVDWWALGVCIYEFVTGVLPFSDETPQKVFDNILANQLEWPEDEEALNPSTEETILALL 60
VDWWALGV IYE G PF + P ++++ I++ ++ +P + ++ + LL
Sbjct: 218 KAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSH---FSSDLKDLLRNLL 274
Query: 61 KSDPTQR 67
+ D T+R
Sbjct: 275 QVDLTKR 281
>pdb|2QCS|A Chain A, A Complex Structure Between The Catalytic And Regulatory
Subunit Of Protein Kinase A That Represents The
Inhibited State
pdb|2CPK|E Chain E, Crystal Structure Of The Catalytic Subunit Of Cyclic
Adenosine Monophosphate-Dependent Protein Kinase
pdb|4DG0|E Chain E, Crystal Structure Of Myristoylated Wt Catalytic Subunit Of
Camp- Dependent Protein Kinase In Complex With Sp20 And
Amp-Pnp
pdb|4DG2|E Chain E, Crystal Structure Of Myristoylated Wt Catalytic Subunit Of
Camp- Dependent Protein Kinase In Complex With Sp20
pdb|4DH1|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With Low Mg2+, Atp And Ip20
pdb|4DH3|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Atp And Ip20
pdb|4DH5|A Chain A, Room Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Adp,
Phosphate, And Ip20
pdb|4DH7|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Amp-pnp And
Ip20'
pdb|4DH8|A Chain A, Room Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Amp-pnp And
Ip20
Length = 350
Score = 48.5 bits (114), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 22/67 (32%), Positives = 38/67 (56%), Gaps = 3/67 (4%)
Query: 1 SGVDWWALGVCIYEFVTGVLPFSDETPQKVFDNILANQLEWPEDEEALNPSTEETILALL 60
VDWWALGV IYE G PF + P ++++ I++ ++ +P + ++ + LL
Sbjct: 217 KAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSH---FSSDLKDLLRNLL 273
Query: 61 KSDPTQR 67
+ D T+R
Sbjct: 274 QVDLTKR 280
>pdb|2UZT|A Chain A, Pka Structures Of Akt, Indazole-Pyridine Inhibitors
pdb|2UZU|E Chain E, Pka Structures Of Indazole-Pyridine Series Of Akt
Inhibitors
pdb|2UZV|A Chain A, Pka Structures Of Indazole-pyridine Series Of Akt
Inhibitors
pdb|2UZW|E Chain E, Pka Structures Of Indazole-Pyridine Series Of Akt
Inhibitors
Length = 336
Score = 48.5 bits (114), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 22/67 (32%), Positives = 38/67 (56%), Gaps = 3/67 (4%)
Query: 1 SGVDWWALGVCIYEFVTGVLPFSDETPQKVFDNILANQLEWPEDEEALNPSTEETILALL 60
VDWWALGV IYE G PF + P ++++ I++ ++ +P + ++ + LL
Sbjct: 203 KAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSH---FSSDLKDLLRNLL 259
Query: 61 KSDPTQR 67
+ D T+R
Sbjct: 260 QVDLTKR 266
>pdb|2GNJ|A Chain A, Pka Three Fold Mutant Model Of Rho-Kinase With Y-27632
pdb|2GNL|A Chain A, Pka Threefold Mutant Model Of Rho-Kinase With Inhibitor H-
1152p
Length = 350
Score = 48.5 bits (114), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 22/67 (32%), Positives = 38/67 (56%), Gaps = 3/67 (4%)
Query: 1 SGVDWWALGVCIYEFVTGVLPFSDETPQKVFDNILANQLEWPEDEEALNPSTEETILALL 60
VDWWALGV IYE G PF + P ++++ I++ ++ +P + ++ + LL
Sbjct: 217 KAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSH---FSSDLKDLLRNLL 273
Query: 61 KSDPTQR 67
+ D T+R
Sbjct: 274 QVDLTKR 280
>pdb|1BKX|A Chain A, A Binary Complex Of The Catalytic Subunit Of
Camp-Dependent Protein Kinase And Adenosine Further
Defines Conformational Flexibility
pdb|1BX6|A Chain A, Crystal Structure Of The Potent Natural Product Inhibitor
Balanol In Complex With The Catalytic Subunit Of Camp-
Dependent Protein Kinase
Length = 350
Score = 48.5 bits (114), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 22/67 (32%), Positives = 38/67 (56%), Gaps = 3/67 (4%)
Query: 1 SGVDWWALGVCIYEFVTGVLPFSDETPQKVFDNILANQLEWPEDEEALNPSTEETILALL 60
VDWWALGV IYE G PF + P ++++ I++ ++ +P + ++ + LL
Sbjct: 217 KAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSH---FSSDLKDLLRNLL 273
Query: 61 KSDPTQR 67
+ D T+R
Sbjct: 274 QVDLTKR 280
>pdb|1STC|E Chain E, Camp-Dependent Protein Kinase, Alpha-Catalytic Subunit In
Complex With Staurosporine
pdb|1Q8T|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase
(Pka) In Complex With Rho-Kinase Inhibitor Y-27632
pdb|1Q8U|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In
Complex With Rho-Kinase Inhibitor H-1152p
pdb|1SVE|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 1
pdb|1SVG|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 4
pdb|1VEB|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 5
pdb|3E8C|A Chain A, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|B Chain B, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|C Chain C, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|D Chain D, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|E Chain E, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|F Chain F, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8E|A Chain A, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|B Chain B, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|E Chain E, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|I Chain I, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|L Chain L, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|P Chain P, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
Length = 350
Score = 48.5 bits (114), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 22/67 (32%), Positives = 38/67 (56%), Gaps = 3/67 (4%)
Query: 1 SGVDWWALGVCIYEFVTGVLPFSDETPQKVFDNILANQLEWPEDEEALNPSTEETILALL 60
VDWWALGV IYE G PF + P ++++ I++ ++ +P + ++ + LL
Sbjct: 217 KAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSH---FSSDLKDLLRNLL 273
Query: 61 KSDPTQR 67
+ D T+R
Sbjct: 274 QVDLTKR 280
>pdb|1XH7|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 48.5 bits (114), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 22/67 (32%), Positives = 38/67 (56%), Gaps = 3/67 (4%)
Query: 1 SGVDWWALGVCIYEFVTGVLPFSDETPQKVFDNILANQLEWPEDEEALNPSTEETILALL 60
VDWWALGV IYE G PF + P ++++ I++ ++ +P + ++ + LL
Sbjct: 217 KAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSH---FSSDLKDLLRNLL 273
Query: 61 KSDPTQR 67
+ D T+R
Sbjct: 274 QVDLTKR 280
>pdb|1SZM|A Chain A, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein
Kinase A (Pka)
pdb|1SZM|B Chain B, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein
Kinase A (Pka)
Length = 350
Score = 48.5 bits (114), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 22/67 (32%), Positives = 38/67 (56%), Gaps = 3/67 (4%)
Query: 1 SGVDWWALGVCIYEFVTGVLPFSDETPQKVFDNILANQLEWPEDEEALNPSTEETILALL 60
VDWWALGV IYE G PF + P ++++ I++ ++ +P + ++ + LL
Sbjct: 217 KAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSH---FSSDLKDLLRNLL 273
Query: 61 KSDPTQR 67
+ D T+R
Sbjct: 274 QVDLTKR 280
>pdb|4DFY|A Chain A, Crystal Structure Of R194a Mutant Of Camp-Dependent
Protein Kinase With Unphosphorylated Activation Loop
pdb|4DFY|E Chain E, Crystal Structure Of R194a Mutant Of Camp-Dependent
Protein Kinase With Unphosphorylated Activation Loop
Length = 371
Score = 48.5 bits (114), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 22/67 (32%), Positives = 38/67 (56%), Gaps = 3/67 (4%)
Query: 1 SGVDWWALGVCIYEFVTGVLPFSDETPQKVFDNILANQLEWPEDEEALNPSTEETILALL 60
VDWWALGV IYE G PF + P ++++ I++ ++ +P + ++ + LL
Sbjct: 238 KAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSH---FSSDLKDLLRNLL 294
Query: 61 KSDPTQR 67
+ D T+R
Sbjct: 295 QVDLTKR 301
>pdb|3QAM|E Chain E, Crystal Structure Of Glu208ala Mutant Of Catalytic Subunit
Of Camp- Dependent Protein Kinase
Length = 350
Score = 48.5 bits (114), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 22/67 (32%), Positives = 38/67 (56%), Gaps = 3/67 (4%)
Query: 1 SGVDWWALGVCIYEFVTGVLPFSDETPQKVFDNILANQLEWPEDEEALNPSTEETILALL 60
VDWWALGV IYE G PF + P ++++ I++ ++ +P + ++ + LL
Sbjct: 217 KAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSH---FSSDLKDLLRNLL 273
Query: 61 KSDPTQR 67
+ D T+R
Sbjct: 274 QVDLTKR 280
>pdb|3O7L|B Chain B, Crystal Structure Of Phospholamban (1-19):pka
C-Subunit:amp-Pnp:mg2+ Complex
Length = 350
Score = 48.5 bits (114), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 22/67 (32%), Positives = 38/67 (56%), Gaps = 3/67 (4%)
Query: 1 SGVDWWALGVCIYEFVTGVLPFSDETPQKVFDNILANQLEWPEDEEALNPSTEETILALL 60
VDWWALGV IYE G PF + P ++++ I++ ++ +P + ++ + LL
Sbjct: 217 KAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSH---FSSDLKDLLRNLL 273
Query: 61 KSDPTQR 67
+ D T+R
Sbjct: 274 QVDLTKR 280
>pdb|3AGL|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1039
pdb|3AGL|B Chain B, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1039
pdb|3VQH|A Chain A, Bromine Sad Partially Resolves Multiple Binding Modes For
Pka Inhibitor H-89
Length = 351
Score = 48.5 bits (114), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 22/67 (32%), Positives = 38/67 (56%), Gaps = 3/67 (4%)
Query: 1 SGVDWWALGVCIYEFVTGVLPFSDETPQKVFDNILANQLEWPEDEEALNPSTEETILALL 60
VDWWALGV IYE G PF + P ++++ I++ ++ +P + ++ + LL
Sbjct: 218 KAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSH---FSSDLKDLLRNLL 274
Query: 61 KSDPTQR 67
+ D T+R
Sbjct: 275 QVDLTKR 281
>pdb|3DND|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
pdb|3DNE|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
Length = 350
Score = 48.5 bits (114), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 22/67 (32%), Positives = 38/67 (56%), Gaps = 3/67 (4%)
Query: 1 SGVDWWALGVCIYEFVTGVLPFSDETPQKVFDNILANQLEWPEDEEALNPSTEETILALL 60
VDWWALGV IYE G PF + P ++++ I++ ++ +P + ++ + LL
Sbjct: 217 KAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSH---FSSDLKDLLRNLL 273
Query: 61 KSDPTQR 67
+ D T+R
Sbjct: 274 QVDLTKR 280
>pdb|1XH9|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 48.5 bits (114), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 22/67 (32%), Positives = 38/67 (56%), Gaps = 3/67 (4%)
Query: 1 SGVDWWALGVCIYEFVTGVLPFSDETPQKVFDNILANQLEWPEDEEALNPSTEETILALL 60
VDWWALGV IYE G PF + P ++++ I++ ++ +P + ++ + LL
Sbjct: 217 KAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSH---FSSDLKDLLRNLL 273
Query: 61 KSDPTQR 67
+ D T+R
Sbjct: 274 QVDLTKR 280
>pdb|3AGM|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-670
pdb|3L9L|A Chain A, Crystal Structure Of Pka With Compound 36
pdb|3L9L|B Chain B, Crystal Structure Of Pka With Compound 36
pdb|3OOG|A Chain A, Human Camp-Dependent Protein Kinase In Complex With A
Small Fragment
pdb|3OVV|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3OWP|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3OXT|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3P0M|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3POO|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
Length = 351
Score = 48.5 bits (114), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 22/67 (32%), Positives = 38/67 (56%), Gaps = 3/67 (4%)
Query: 1 SGVDWWALGVCIYEFVTGVLPFSDETPQKVFDNILANQLEWPEDEEALNPSTEETILALL 60
VDWWALGV IYE G PF + P ++++ I++ ++ +P + ++ + LL
Sbjct: 218 KAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSH---FSSDLKDLLRNLL 274
Query: 61 KSDPTQR 67
+ D T+R
Sbjct: 275 QVDLTKR 281
>pdb|2VO0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4-
Chlorophenyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine
Length = 351
Score = 48.5 bits (114), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 22/67 (32%), Positives = 38/67 (56%), Gaps = 3/67 (4%)
Query: 1 SGVDWWALGVCIYEFVTGVLPFSDETPQKVFDNILANQLEWPEDEEALNPSTEETILALL 60
VDWWALGV IYE G PF + P ++++ I++ ++ +P + ++ + LL
Sbjct: 218 KAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSH---FSSDLKDLLRNLL 274
Query: 61 KSDPTQR 67
+ D T+R
Sbjct: 275 QVDLTKR 281
>pdb|2UVY|A Chain A, Structure Of Pka-pkb Chimera Complexed With Methyl-(4-(9h-
Purin-6-yl)-benzyl)-amine
pdb|2UVZ|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
C-Phenyl-C-(4-( 9h-Purin-6-Yl)-Phenyl)-Methylamine
pdb|2UW0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 6-(4-(4-(4-
Chloro-Phenyl)-Piperidin-4-Yl)-Phenyl)-9h-Purine
pdb|2UW3|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 5-Methyl-4-
Phenyl-1h-Pyrazole
pdb|2UW5|A Chain A, Structure Of Pka-Pkb Chimera Complexed With (R)-2-(4-
Chloro-Phenyl)-2-(4-1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW6|A Chain A, Structure Of Pka-Pkb Chimera Complexed With (S)-2-(4-
Chloro-Phenyl)-2-(4-1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW8|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 2-(4-Chloro-
Phenyl)-2-Phenyl-Ethylamine
pdb|2VNW|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
(1-(9h-Purin-6- Yl)piperidin-4-Yl)methanamine
pdb|2VNY|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
(1-(9h-Purin-6- Yl)piperidin-4-Yl)amine
pdb|2VO3|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4-
Chlorophenyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine
pdb|2VO6|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 4-(4-
Chlorobenzyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Ylamine
Length = 351
Score = 48.5 bits (114), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 22/67 (32%), Positives = 38/67 (56%), Gaps = 3/67 (4%)
Query: 1 SGVDWWALGVCIYEFVTGVLPFSDETPQKVFDNILANQLEWPEDEEALNPSTEETILALL 60
VDWWALGV IYE G PF + P ++++ I++ ++ +P + ++ + LL
Sbjct: 218 KAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSH---FSSDLKDLLRNLL 274
Query: 61 KSDPTQR 67
+ D T+R
Sbjct: 275 QVDLTKR 281
>pdb|2F7E|E Chain E, Pka Complexed With
(S)-2-(1h-Indol-3-Yl)-1-(5-Isoquinolin-6-
Yl-Pyridin-3-Yloxymethyl-Etylamine
pdb|2F7X|E Chain E, Protein Kinase A Bound To
(s)-2-(1h-indol-3-yl)-1-[5-((e)-2-
Pyridin-4-yl-vinyl)-pyridin-3-yloxymethyl]-ethylamine
pdb|2F7Z|E Chain E, Protein Kinase A Bound To
(R)-1-(1h-Indol-3-Ylmethyl)-2-(2-
Pyridin-4-Yl-[1,7]naphtyridin-5-Yloxy)-Ehylamine
pdb|2OH0|E Chain E, Crystal Structure Of Protein Kinase A In Complex With
Pyridine-Pyrazolopyridine Based Inhibitors
pdb|2OJF|E Chain E, Crystal Structure Of Protein Kinase A In Complex With
Pyridine-Pyrazolopyridine Based Inhibitors
Length = 351
Score = 48.5 bits (114), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 22/67 (32%), Positives = 38/67 (56%), Gaps = 3/67 (4%)
Query: 1 SGVDWWALGVCIYEFVTGVLPFSDETPQKVFDNILANQLEWPEDEEALNPSTEETILALL 60
VDWWALGV IYE G PF + P ++++ I++ ++ +P + ++ + LL
Sbjct: 218 KAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSH---FSSDLKDLLRNLL 274
Query: 61 KSDPTQR 67
+ D T+R
Sbjct: 275 QVDLTKR 281
>pdb|3ZH8|A Chain A, A Novel Small Molecule Apkc Inhibitor
pdb|3ZH8|B Chain B, A Novel Small Molecule Apkc Inhibitor
pdb|3ZH8|C Chain C, A Novel Small Molecule Apkc Inhibitor
Length = 349
Score = 48.5 bits (114), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 30/100 (30%), Positives = 47/100 (47%), Gaps = 18/100 (18%)
Query: 3 VDWWALGVCIYEFVTGVLPF----SDETPQK-----VFDNILANQLEWPEDEEALNPSTE 53
VDWWALGV ++E + G PF S + P + +F IL Q+ P +L+
Sbjct: 187 VDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLFQVILEKQIRIP---RSLSVKAA 243
Query: 54 ETILALLKSDPTQRPSGH------QVRRLPMFKDYDWDSI 87
+ + L DP +R H ++ P F++ DWD +
Sbjct: 244 SVLKSFLNKDPKERLGCHPQTGFADIQGHPFFRNVDWDMM 283
>pdb|4DG3|E Chain E, Crystal Structure Of R336a Mutant Of Camp-dependent
Protein Kinase With Unphosphorylated Turn Motif
Length = 371
Score = 48.5 bits (114), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 22/67 (32%), Positives = 38/67 (56%), Gaps = 3/67 (4%)
Query: 1 SGVDWWALGVCIYEFVTGVLPFSDETPQKVFDNILANQLEWPEDEEALNPSTEETILALL 60
VDWWALGV IYE G PF + P ++++ I++ ++ +P + ++ + LL
Sbjct: 238 KAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSH---FSSDLKDLLRNLL 294
Query: 61 KSDPTQR 67
+ D T+R
Sbjct: 295 QVDLTKR 301
>pdb|2C1A|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
Isoquinoline-5-Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl)amide
pdb|2C1B|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
(4r,2s)-5'-(4-(4-Chlorobenzyloxy)pyrrolidin-2-
Ylmethanesulfonyl)isoquinoline
pdb|2VO7|A Chain A, Structure Of Pka Complexed With 4-(4-Chlorobenzyl)-1-(7h-
Pyrrolo(2,3-D)pyrimidin-4-Yl)piperidin-4-Ylamine
pdb|3AG9|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1012
pdb|3AG9|B Chain B, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1012
Length = 351
Score = 48.5 bits (114), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 22/67 (32%), Positives = 38/67 (56%), Gaps = 3/67 (4%)
Query: 1 SGVDWWALGVCIYEFVTGVLPFSDETPQKVFDNILANQLEWPEDEEALNPSTEETILALL 60
VDWWALGV IYE G PF + P ++++ I++ ++ +P + ++ + LL
Sbjct: 218 KAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSH---FSSDLKDLLRNLL 274
Query: 61 KSDPTQR 67
+ D T+R
Sbjct: 275 QVDLTKR 281
>pdb|1SVH|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 8
pdb|1XH5|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|1XH6|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|1XH8|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|2GFC|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
Length = 350
Score = 48.5 bits (114), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 22/67 (32%), Positives = 38/67 (56%), Gaps = 3/67 (4%)
Query: 1 SGVDWWALGVCIYEFVTGVLPFSDETPQKVFDNILANQLEWPEDEEALNPSTEETILALL 60
VDWWALGV IYE G PF + P ++++ I++ ++ +P + ++ + LL
Sbjct: 217 KAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSH---FSSDLKDLLRNLL 273
Query: 61 KSDPTQR 67
+ D T+R
Sbjct: 274 QVDLTKR 280
>pdb|1Q24|A Chain A, Pka Double Mutant Model Of Pkb In Complex With Mgatp
pdb|1Q62|A Chain A, Pka Double Mutant Model Of Pkb
Length = 350
Score = 48.5 bits (114), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 22/67 (32%), Positives = 38/67 (56%), Gaps = 3/67 (4%)
Query: 1 SGVDWWALGVCIYEFVTGVLPFSDETPQKVFDNILANQLEWPEDEEALNPSTEETILALL 60
VDWWALGV IYE G PF + P ++++ I++ ++ +P + ++ + LL
Sbjct: 217 KAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSH---FSSDLKDLLRNLL 273
Query: 61 KSDPTQR 67
+ D T+R
Sbjct: 274 QVDLTKR 280
>pdb|1FMO|E Chain E, Crystal Structure Of A Polyhistidine-Tagged Recombinant
Catalytic Subunit Of Camp-Dependent Protein Kinase
Complexed With The Peptide Inhibitor Pki(5-24) And
Adenosine
pdb|1JLU|E Chain E, Crystal Structure Of The Catalytic Subunit Of
Camp-dependent Protein Kinase Complexed With A
Phosphorylated Substrate Peptide And Detergent
pdb|1RE8|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 2
pdb|1REJ|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 1
pdb|1REK|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 8
pdb|2QVS|E Chain E, Crystal Structure Of Type Iia Holoenzyme Of Camp-Dependent
Protein Kinase
pdb|3FJQ|E Chain E, Crystal Structure Of Camp-Dependent Protein Kinase
Catalytic Subunit Alpha In Complex With Peptide
Inhibitor Pki Alpha (6-25)
pdb|3IDB|A Chain A, Crystal Structure Of (108-268)riib:c Holoenzyme Of Camp-
Dependent Protein Kinase
pdb|3IDC|A Chain A, Crystal Structure Of (102-265)riib:c Holoenzyme Of Camp-
Dependent Protein Kinase
pdb|3O7L|D Chain D, Crystal Structure Of Phospholamban (1-19):pka
C-Subunit:amp-Pnp:mg2+ Complex
pdb|3OW3|A Chain A, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|1ATP|E Chain E, 2.2 Angstrom Refined Crystal Structure Of The Catalytic
Subunit Of Camp-Dependent Protein Kinase Complexed With
Mnatp And A Peptide Inhibitor
pdb|4DIN|A Chain A, Novel Localization And Quaternary Structure Of The Pka Ri
Beta Holoenzyme
Length = 350
Score = 48.5 bits (114), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 22/67 (32%), Positives = 38/67 (56%), Gaps = 3/67 (4%)
Query: 1 SGVDWWALGVCIYEFVTGVLPFSDETPQKVFDNILANQLEWPEDEEALNPSTEETILALL 60
VDWWALGV IYE G PF + P ++++ I++ ++ +P + ++ + LL
Sbjct: 217 KAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSH---FSSDLKDLLRNLL 273
Query: 61 KSDPTQR 67
+ D T+R
Sbjct: 274 QVDLTKR 280
>pdb|1APM|E Chain E, 2.0 Angstrom Refined Crystal Structure Of The Catalytic
Subunit Of Camp-Dependent Protein Kinase Complexed With
A Peptide Inhibitor And Detergent
Length = 350
Score = 48.5 bits (114), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 22/67 (32%), Positives = 38/67 (56%), Gaps = 3/67 (4%)
Query: 1 SGVDWWALGVCIYEFVTGVLPFSDETPQKVFDNILANQLEWPEDEEALNPSTEETILALL 60
VDWWALGV IYE G PF + P ++++ I++ ++ +P + ++ + LL
Sbjct: 217 KAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSH---FSSDLKDLLRNLL 273
Query: 61 KSDPTQR 67
+ D T+R
Sbjct: 274 QVDLTKR 280
>pdb|2ERZ|E Chain E, Crystal Structure Of C-amp Dependent Kinase (pka) Bound To
Hydroxyfasudil
Length = 351
Score = 48.5 bits (114), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 22/67 (32%), Positives = 38/67 (56%), Gaps = 3/67 (4%)
Query: 1 SGVDWWALGVCIYEFVTGVLPFSDETPQKVFDNILANQLEWPEDEEALNPSTEETILALL 60
VDWWALGV IYE G PF + P ++++ I++ ++ +P + ++ + LL
Sbjct: 218 KAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSH---FSSDLKDLLRNLL 274
Query: 61 KSDPTQR 67
+ D T+R
Sbjct: 275 QVDLTKR 281
>pdb|3FHI|A Chain A, Crystal Structure Of A Complex Between The Catalytic And
Regulatory (Ri{alpha}) Subunits Of Pka
Length = 350
Score = 48.5 bits (114), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 22/67 (32%), Positives = 38/67 (56%), Gaps = 3/67 (4%)
Query: 1 SGVDWWALGVCIYEFVTGVLPFSDETPQKVFDNILANQLEWPEDEEALNPSTEETILALL 60
VDWWALGV IYE G PF + P ++++ I++ ++ +P + ++ + LL
Sbjct: 217 KAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSH---FSSDLKDLLRNLL 273
Query: 61 KSDPTQR 67
+ D T+R
Sbjct: 274 QVDLTKR 280
>pdb|1RDQ|E Chain E, Hydrolysis Of Atp In The Crystal Of Y204a Mutant Of
Camp-Dependent Protein Kinase
Length = 350
Score = 48.5 bits (114), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 22/67 (32%), Positives = 38/67 (56%), Gaps = 3/67 (4%)
Query: 1 SGVDWWALGVCIYEFVTGVLPFSDETPQKVFDNILANQLEWPEDEEALNPSTEETILALL 60
VDWWALGV IYE G PF + P ++++ I++ ++ +P + ++ + LL
Sbjct: 217 KAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSH---FSSDLKDLLRNLL 273
Query: 61 KSDPTQR 67
+ D T+R
Sbjct: 274 QVDLTKR 280
>pdb|1Q61|A Chain A, Pka Triple Mutant Model Of Pkb
Length = 350
Score = 48.5 bits (114), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 22/67 (32%), Positives = 38/67 (56%), Gaps = 3/67 (4%)
Query: 1 SGVDWWALGVCIYEFVTGVLPFSDETPQKVFDNILANQLEWPEDEEALNPSTEETILALL 60
VDWWALGV IYE G PF + P ++++ I++ ++ +P + ++ + LL
Sbjct: 217 KAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSH---FSSDLKDLLRNLL 273
Query: 61 KSDPTQR 67
+ D T+R
Sbjct: 274 QVDLTKR 280
>pdb|1CMK|E Chain E, Crystal Structures Of The Myristylated Catalytic Subunit
Of Camp- Dependent Protein Kinase Reveal Open And Closed
Conformations
Length = 350
Score = 48.5 bits (114), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 22/67 (32%), Positives = 38/67 (56%), Gaps = 3/67 (4%)
Query: 1 SGVDWWALGVCIYEFVTGVLPFSDETPQKVFDNILANQLEWPEDEEALNPSTEETILALL 60
VDWWALGV IYE G PF + P ++++ I++ ++ +P + ++ + LL
Sbjct: 217 KAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSH---FSSDLKDLLRNLL 273
Query: 61 KSDPTQR 67
+ D T+R
Sbjct: 274 QVDLTKR 280
>pdb|2JDS|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
A- 443654
Length = 351
Score = 48.5 bits (114), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 22/67 (32%), Positives = 38/67 (56%), Gaps = 3/67 (4%)
Query: 1 SGVDWWALGVCIYEFVTGVLPFSDETPQKVFDNILANQLEWPEDEEALNPSTEETILALL 60
VDWWALGV IYE G PF + P ++++ I++ ++ +P + ++ + LL
Sbjct: 218 KAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSH---FSSDLKDLLRNLL 274
Query: 61 KSDPTQR 67
+ D T+R
Sbjct: 275 QVDLTKR 281
>pdb|1SMH|A Chain A, Protein Kinase A Variant Complex With Completely Ordered
N- Terminal Helix
pdb|1XHA|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 48.5 bits (114), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 22/67 (32%), Positives = 38/67 (56%), Gaps = 3/67 (4%)
Query: 1 SGVDWWALGVCIYEFVTGVLPFSDETPQKVFDNILANQLEWPEDEEALNPSTEETILALL 60
VDWWALGV IYE G PF + P ++++ I++ ++ +P + ++ + LL
Sbjct: 217 KAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSH---FSSDLKDLLRNLL 273
Query: 61 KSDPTQR 67
+ D T+R
Sbjct: 274 QVDLTKR 280
>pdb|1L3R|E Chain E, Crystal Structure Of A Transition State Mimic Of The
Catalytic Subunit Of Camp-Dependent Protein Kinase
pdb|3TNP|C Chain C, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
pdb|3TNP|F Chain F, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
pdb|3TNQ|B Chain B, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
Length = 350
Score = 48.5 bits (114), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 22/67 (32%), Positives = 38/67 (56%), Gaps = 3/67 (4%)
Query: 1 SGVDWWALGVCIYEFVTGVLPFSDETPQKVFDNILANQLEWPEDEEALNPSTEETILALL 60
VDWWALGV IYE G PF + P ++++ I++ ++ +P + ++ + LL
Sbjct: 217 KAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSH---FSSDLKDLLRNLL 273
Query: 61 KSDPTQR 67
+ D T+R
Sbjct: 274 QVDLTKR 280
>pdb|1CTP|E Chain E, Structure Of The Mammalian Catalytic Subunit Of
Camp-Dependent Protein Kinase And An Inhibitor Peptide
Displays An Open Conformation
Length = 350
Score = 48.5 bits (114), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 22/67 (32%), Positives = 38/67 (56%), Gaps = 3/67 (4%)
Query: 1 SGVDWWALGVCIYEFVTGVLPFSDETPQKVFDNILANQLEWPEDEEALNPSTEETILALL 60
VDWWALGV IYE G PF + P ++++ I++ ++ +P + ++ + LL
Sbjct: 217 KAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSH---FSSDLKDLLRNLL 273
Query: 61 KSDPTQR 67
+ D T+R
Sbjct: 274 QVDLTKR 280
>pdb|1CDK|A Chain A, Camp-Dependent Protein Kinase Catalytic Subunit
(E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein
Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24)
Isoelectric Variant Ca) And Mn2+ Adenylyl
Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c
pdb|1CDK|B Chain B, Camp-Dependent Protein Kinase Catalytic Subunit
(E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein
Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24)
Isoelectric Variant Ca) And Mn2+ Adenylyl
Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c
Length = 350
Score = 48.5 bits (114), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 22/67 (32%), Positives = 38/67 (56%), Gaps = 3/67 (4%)
Query: 1 SGVDWWALGVCIYEFVTGVLPFSDETPQKVFDNILANQLEWPEDEEALNPSTEETILALL 60
VDWWALGV IYE G PF + P ++++ I++ ++ +P + ++ + LL
Sbjct: 217 KAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSH---FSSDLKDLLRNLL 273
Query: 61 KSDPTQR 67
+ D T+R
Sbjct: 274 QVDLTKR 280
>pdb|1J3H|A Chain A, Crystal Structure Of Apoenzyme Camp-Dependent Protein
Kinase Catalytic Subunit
pdb|1J3H|B Chain B, Crystal Structure Of Apoenzyme Camp-Dependent Protein
Kinase Catalytic Subunit
Length = 350
Score = 48.5 bits (114), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 22/67 (32%), Positives = 38/67 (56%), Gaps = 3/67 (4%)
Query: 1 SGVDWWALGVCIYEFVTGVLPFSDETPQKVFDNILANQLEWPEDEEALNPSTEETILALL 60
VDWWALGV IYE G PF + P ++++ I++ ++ +P + ++ + LL
Sbjct: 217 KAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSH---FSSDLKDLLRNLL 273
Query: 61 KSDPTQR 67
+ D T+R
Sbjct: 274 QVDLTKR 280
>pdb|4DFX|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit
Of Camp- Dependent Protein Kinase In Complex With Sp20
And Amp-Pnp
pdb|4DFZ|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit
Of Camp- Dependent Protein Kinase In Complex With Sp20
Length = 350
Score = 48.5 bits (114), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 22/67 (32%), Positives = 38/67 (56%), Gaps = 3/67 (4%)
Query: 1 SGVDWWALGVCIYEFVTGVLPFSDETPQKVFDNILANQLEWPEDEEALNPSTEETILALL 60
VDWWALGV IYE G PF + P ++++ I++ ++ +P + ++ + LL
Sbjct: 217 KAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSH---FSSDLKDLLRNLL 273
Query: 61 KSDPTQR 67
+ D T+R
Sbjct: 274 QVDLTKR 280
>pdb|3PVB|A Chain A, Crystal Structure Of (73-244)ria:c Holoenzyme Of
Camp-Dependent Protein Kinase
Length = 345
Score = 48.5 bits (114), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 22/67 (32%), Positives = 38/67 (56%), Gaps = 3/67 (4%)
Query: 1 SGVDWWALGVCIYEFVTGVLPFSDETPQKVFDNILANQLEWPEDEEALNPSTEETILALL 60
VDWWALGV IYE G PF + P ++++ I++ ++ +P + ++ + LL
Sbjct: 212 KAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSH---FSSDLKDLLRNLL 268
Query: 61 KSDPTQR 67
+ D T+R
Sbjct: 269 QVDLTKR 275
>pdb|3A8W|A Chain A, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8W|B Chain B, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8X|A Chain A, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8X|B Chain B, Crystal Structure Of Pkciota Kinase Domain
Length = 345
Score = 48.1 bits (113), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 30/100 (30%), Positives = 47/100 (47%), Gaps = 18/100 (18%)
Query: 3 VDWWALGVCIYEFVTGVLPF----SDETPQK-----VFDNILANQLEWPEDEEALNPSTE 53
VDWWALGV ++E + G PF S + P + +F IL Q+ P +L+
Sbjct: 191 VDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLFQVILEKQIRIP---RSLSVKAA 247
Query: 54 ETILALLKSDPTQRPSGH------QVRRLPMFKDYDWDSI 87
+ + L DP +R H ++ P F++ DWD +
Sbjct: 248 SVLKSFLNKDPKERLGCHPQTGFADIQGHPFFRNVDWDMM 287
>pdb|1JBP|E Chain E, Crystal Structure Of The Catalytic Subunit Of Camp-
Dependent Protein Kinase Complexed With A Substrate
Peptide, Adp And Detergent
Length = 350
Score = 48.1 bits (113), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 22/67 (32%), Positives = 38/67 (56%), Gaps = 3/67 (4%)
Query: 1 SGVDWWALGVCIYEFVTGVLPFSDETPQKVFDNILANQLEWPEDEEALNPSTEETILALL 60
VDWWALGV IYE G PF + P ++++ I++ ++ +P + ++ + LL
Sbjct: 217 KAVDWWALGVLIYEMAAGYPPFFADEPIQIYEKIVSGKVRFPSH---FSSDLKDLLRNLL 273
Query: 61 KSDPTQR 67
+ D T+R
Sbjct: 274 QVDLTKR 280
>pdb|2H6D|A Chain A, Protein Kinase Domain Of The Human 5'-Amp-Activated
Protein Kinase Catalytic Subunit Alpha-2 (Ampk Alpha-2
Chain)
Length = 276
Score = 47.4 bits (111), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 26/78 (33%), Positives = 37/78 (47%), Gaps = 3/78 (3%)
Query: 3 VDWWALGVCIYEFVTGVLPFSDETPQKVFDNILANQLEWPEDEEALNPSTEETILALLKS 62
VD W+ GV +Y + G LPF DE +F I P E LN S ++ +L+
Sbjct: 192 VDIWSCGVILYALLCGTLPFDDEHVPTLFKKIRGGVFYIP---EYLNRSVATLLMHMLQV 248
Query: 63 DPTQRPSGHQVRRLPMFK 80
DP +R + +R FK
Sbjct: 249 DPLKRATIKDIREHEWFK 266
>pdb|2YZA|A Chain A, Crystal Structure Of Kinase Domain Of Human
5'-Amp-Activated Protein Kinase Alpha-2 Subunit Mutant
(T172d)
pdb|3AQV|A Chain A, Human Amp-Activated Protein Kinase Alpha 2 Subunit Kinase
Domain (T172d) Complexed With Compound C
Length = 276
Score = 47.4 bits (111), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 26/78 (33%), Positives = 37/78 (47%), Gaps = 3/78 (3%)
Query: 3 VDWWALGVCIYEFVTGVLPFSDETPQKVFDNILANQLEWPEDEEALNPSTEETILALLKS 62
VD W+ GV +Y + G LPF DE +F I P E LN S ++ +L+
Sbjct: 192 VDIWSCGVILYALLCGTLPFDDEHVPTLFKKIRGGVFYIP---EYLNRSVATLLMHMLQV 248
Query: 63 DPTQRPSGHQVRRLPMFK 80
DP +R + +R FK
Sbjct: 249 DPLKRATIKDIREHEWFK 266
>pdb|1SYK|A Chain A, Crystal Structure Of E230q Mutant Of Camp-Dependent
Protein Kinase Reveals Unexpected Apoenzyme Conformation
pdb|1SYK|B Chain B, Crystal Structure Of E230q Mutant Of Camp-Dependent
Protein Kinase Reveals Unexpected Apoenzyme Conformation
Length = 350
Score = 47.4 bits (111), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 21/67 (31%), Positives = 38/67 (56%), Gaps = 3/67 (4%)
Query: 1 SGVDWWALGVCIYEFVTGVLPFSDETPQKVFDNILANQLEWPEDEEALNPSTEETILALL 60
VDWWALGV IY+ G PF + P ++++ I++ ++ +P + ++ + LL
Sbjct: 217 KAVDWWALGVLIYQMAAGYPPFFADQPIQIYEKIVSGKVRFPSH---FSSDLKDLLRNLL 273
Query: 61 KSDPTQR 67
+ D T+R
Sbjct: 274 QVDLTKR 280
>pdb|2DWB|A Chain A, Aurora-A Kinase Complexed With Amppnp
Length = 285
Score = 47.4 bits (111), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 26/75 (34%), Positives = 38/75 (50%), Gaps = 3/75 (4%)
Query: 3 VDWWALGVCIYEFVTGVLPFSDETPQKVFDNILANQLEWPEDEEALNPSTEETILALLKS 62
VD W+LGV YEF+ G PF T Q+ + I + +P + + + I LLK
Sbjct: 192 VDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFP---DFVTEGARDLISRLLKH 248
Query: 63 DPTQRPSGHQVRRLP 77
+P+QRP +V P
Sbjct: 249 NPSQRPXLREVLEHP 263
>pdb|2C6E|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
pdb|2C6E|B Chain B, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
Length = 283
Score = 47.0 bits (110), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 26/75 (34%), Positives = 38/75 (50%), Gaps = 3/75 (4%)
Query: 3 VDWWALGVCIYEFVTGVLPFSDETPQKVFDNILANQLEWPEDEEALNPSTEETILALLKS 62
VD W+LGV YEF+ G PF T Q+ + I + +P + + + I LLK
Sbjct: 192 VDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFP---DFVTEGARDLISRLLKH 248
Query: 63 DPTQRPSGHQVRRLP 77
+P+QRP +V P
Sbjct: 249 NPSQRPMLREVLEHP 263
>pdb|3LAU|A Chain A, Crystal Structure Of Aurora2 Kinase In Complex With A
Gsk3beta Inhibitor
Length = 287
Score = 47.0 bits (110), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 26/75 (34%), Positives = 38/75 (50%), Gaps = 3/75 (4%)
Query: 3 VDWWALGVCIYEFVTGVLPFSDETPQKVFDNILANQLEWPEDEEALNPSTEETILALLKS 62
VD W+LGV YEF+ G PF T Q+ + I + +P + + + I LLK
Sbjct: 187 VDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFP---DFVTEGARDLISRLLKH 243
Query: 63 DPTQRPSGHQVRRLP 77
+P+QRP +V P
Sbjct: 244 NPSQRPMLREVLEHP 258
>pdb|2C6D|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With
Adpnp
Length = 275
Score = 47.0 bits (110), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 26/75 (34%), Positives = 38/75 (50%), Gaps = 3/75 (4%)
Query: 3 VDWWALGVCIYEFVTGVLPFSDETPQKVFDNILANQLEWPEDEEALNPSTEETILALLKS 62
VD W+LGV YEF+ G PF T Q+ + I + +P + + + I LLK
Sbjct: 187 VDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFP---DFVTEGARDLISRLLKH 243
Query: 63 DPTQRPSGHQVRRLP 77
+P+QRP +V P
Sbjct: 244 NPSQRPMLREVLEHP 258
>pdb|1OL5|A Chain A, Structure Of Aurora-A 122-403, Phosphorylated On Thr287,
Thr288 And Bound To Tpx2 1-43
pdb|1OL7|A Chain A, Structure Of Human Aurora-A 122-403 Phosphorylated On
Thr287, Thr288
Length = 282
Score = 47.0 bits (110), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 26/75 (34%), Positives = 38/75 (50%), Gaps = 3/75 (4%)
Query: 3 VDWWALGVCIYEFVTGVLPFSDETPQKVFDNILANQLEWPEDEEALNPSTEETILALLKS 62
VD W+LGV YEF+ G PF T Q+ + I + +P + + + I LLK
Sbjct: 189 VDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFP---DFVTEGARDLISRLLKH 245
Query: 63 DPTQRPSGHQVRRLP 77
+P+QRP +V P
Sbjct: 246 NPSQRPMLREVLEHP 260
>pdb|2XNG|A Chain A, Structure Of Aurora-A Bound To A Selective Imidazopyrazine
Inhibitor
Length = 283
Score = 47.0 bits (110), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 26/75 (34%), Positives = 38/75 (50%), Gaps = 3/75 (4%)
Query: 3 VDWWALGVCIYEFVTGVLPFSDETPQKVFDNILANQLEWPEDEEALNPSTEETILALLKS 62
VD W+LGV YEF+ G PF T Q+ + I + +P + + + I LLK
Sbjct: 190 VDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFP---DFVTEGARDLISRLLKH 246
Query: 63 DPTQRPSGHQVRRLP 77
+P+QRP +V P
Sbjct: 247 NPSQRPMLREVLEHP 261
>pdb|3NRM|A Chain A, Imidazo[1,2-A]pyrazine-Based Aurora Kinase Inhibitors
Length = 283
Score = 47.0 bits (110), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 26/75 (34%), Positives = 38/75 (50%), Gaps = 3/75 (4%)
Query: 3 VDWWALGVCIYEFVTGVLPFSDETPQKVFDNILANQLEWPEDEEALNPSTEETILALLKS 62
VD W+LGV YEF+ G PF T Q+ + I + +P + + + I LLK
Sbjct: 190 VDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFP---DFVTEGARDLISRLLKH 246
Query: 63 DPTQRPSGHQVRRLP 77
+P+QRP +V P
Sbjct: 247 NPSQRPMLREVLEHP 261
>pdb|2X6D|A Chain A, Aurora-A Bound To An Inhibitor
pdb|2X6E|A Chain A, Aurora-A Bound To An Inhibitor
Length = 285
Score = 47.0 bits (110), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 26/75 (34%), Positives = 38/75 (50%), Gaps = 3/75 (4%)
Query: 3 VDWWALGVCIYEFVTGVLPFSDETPQKVFDNILANQLEWPEDEEALNPSTEETILALLKS 62
VD W+LGV YEF+ G PF T Q+ + I + +P + + + I LLK
Sbjct: 192 VDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFP---DFVTEGARDLISRLLKH 248
Query: 63 DPTQRPSGHQVRRLP 77
+P+QRP +V P
Sbjct: 249 NPSQRPMLREVLEHP 263
>pdb|2W1C|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1G|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 47.0 bits (110), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 26/75 (34%), Positives = 38/75 (50%), Gaps = 3/75 (4%)
Query: 3 VDWWALGVCIYEFVTGVLPFSDETPQKVFDNILANQLEWPEDEEALNPSTEETILALLKS 62
VD W+LGV YEF+ G PF T Q+ + I + +P + + + I LLK
Sbjct: 190 VDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFP---DFVTEGARDLISRLLKH 246
Query: 63 DPTQRPSGHQVRRLP 77
+P+QRP +V P
Sbjct: 247 NPSQRPMLREVLEHP 261
>pdb|1OL6|A Chain A, Structure Of Unphosphorylated D274n Mutant Of Aurora-a
Length = 282
Score = 47.0 bits (110), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 26/75 (34%), Positives = 38/75 (50%), Gaps = 3/75 (4%)
Query: 3 VDWWALGVCIYEFVTGVLPFSDETPQKVFDNILANQLEWPEDEEALNPSTEETILALLKS 62
VD W+LGV YEF+ G PF T Q+ + I + +P + + + I LLK
Sbjct: 189 VDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFP---DFVTEGARDLISRLLKH 245
Query: 63 DPTQRPSGHQVRRLP 77
+P+QRP +V P
Sbjct: 246 NPSQRPMLREVLEHP 260
>pdb|3UNZ|A Chain A, Aurora A In Complex With Rpm1679
pdb|3UNZ|B Chain B, Aurora A In Complex With Rpm1679
pdb|3UO4|A Chain A, Aurora A In Complex With Rpm1680
pdb|3UO5|A Chain A, Aurora A In Complex With Yl1-038-31
pdb|3UO6|A Chain A, Aurora A In Complex With Yl5-083
pdb|3UO6|B Chain B, Aurora A In Complex With Yl5-083
pdb|3UOD|A Chain A, Aurora A In Complex With Rpm1693
pdb|3UOH|A Chain A, Aurora A In Complex With Rpm1722
pdb|3UOH|B Chain B, Aurora A In Complex With Rpm1722
pdb|3UOJ|A Chain A, Aurora A In Complex With Rpm1715
pdb|3UOJ|B Chain B, Aurora A In Complex With Rpm1715
pdb|3UOK|A Chain A, Aurora A In Complex With Yl5-81-1
pdb|3UOK|B Chain B, Aurora A In Complex With Yl5-81-1
pdb|3UOL|A Chain A, Aurora A In Complex With So2-162
pdb|3UOL|B Chain B, Aurora A In Complex With So2-162
pdb|3UP2|A Chain A, Aurora A In Complex With Rpm1686
pdb|3UP7|A Chain A, Aurora A In Complex With Yl1-038-09
pdb|4DEA|A Chain A, Aurora A In Complex With Yl1-038-18
pdb|4DEB|A Chain A, Aurora A In Complex With Rk2-17-01
pdb|4DED|A Chain A, Aurora A In Complex With Yl1-038-21
pdb|4DEE|A Chain A, Aurora A In Complex With Adp
Length = 279
Score = 47.0 bits (110), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 26/75 (34%), Positives = 38/75 (50%), Gaps = 3/75 (4%)
Query: 3 VDWWALGVCIYEFVTGVLPFSDETPQKVFDNILANQLEWPEDEEALNPSTEETILALLKS 62
VD W+LGV YEF+ G PF T Q+ + I + +P + + + I LLK
Sbjct: 188 VDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFP---DFVTEGARDLISRLLKH 244
Query: 63 DPTQRPSGHQVRRLP 77
+P+QRP +V P
Sbjct: 245 NPSQRPMLREVLEHP 259
>pdb|3FDN|A Chain A, Structure-Based Drug Design Of Novel Aurora Kinase A
Inhibitors: Structure Basis For Potency And Specificity
pdb|3K5U|A Chain A, Identification, Sar Studies And X-Ray Cocrystal Analysis
Of A Novel Furano-Pyrimidine Aurora Kinase A Inhibitor
pdb|3M11|A Chain A, Crystal Structure Of Aurora A Kinase Complexed With
Inhibitor
Length = 279
Score = 47.0 bits (110), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 26/75 (34%), Positives = 38/75 (50%), Gaps = 3/75 (4%)
Query: 3 VDWWALGVCIYEFVTGVLPFSDETPQKVFDNILANQLEWPEDEEALNPSTEETILALLKS 62
VD W+LGV YEF+ G PF T Q+ + I + +P + + + I LLK
Sbjct: 188 VDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFP---DFVTEGARDLISRLLKH 244
Query: 63 DPTQRPSGHQVRRLP 77
+P+QRP +V P
Sbjct: 245 NPSQRPMLREVLEHP 259
>pdb|2WTW|A Chain A, Aurora-A Inhibitor Structure (2nd Crystal Form)
Length = 285
Score = 47.0 bits (110), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 26/75 (34%), Positives = 38/75 (50%), Gaps = 3/75 (4%)
Query: 3 VDWWALGVCIYEFVTGVLPFSDETPQKVFDNILANQLEWPEDEEALNPSTEETILALLKS 62
VD W+LGV YEF+ G PF T Q+ + I + +P + + + I LLK
Sbjct: 192 VDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFP---DFVTEGARDLISRLLKH 248
Query: 63 DPTQRPSGHQVRRLP 77
+P+QRP +V P
Sbjct: 249 NPSQRPMLREVLEHP 263
>pdb|2W1D|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1E|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1F|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 47.0 bits (110), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 26/75 (34%), Positives = 38/75 (50%), Gaps = 3/75 (4%)
Query: 3 VDWWALGVCIYEFVTGVLPFSDETPQKVFDNILANQLEWPEDEEALNPSTEETILALLKS 62
VD W+LGV YEF+ G PF T Q+ + I + +P + + + I LLK
Sbjct: 190 VDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFP---DFVTEGARDLISRLLKH 246
Query: 63 DPTQRPSGHQVRRLP 77
+P+QRP +V P
Sbjct: 247 NPSQRPMLREVLEHP 261
>pdb|3E5A|A Chain A, Crystal Structure Of Aurora A In Complex With Vx-680 And
Tpx2
Length = 268
Score = 47.0 bits (110), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 26/75 (34%), Positives = 38/75 (50%), Gaps = 3/75 (4%)
Query: 3 VDWWALGVCIYEFVTGVLPFSDETPQKVFDNILANQLEWPEDEEALNPSTEETILALLKS 62
VD W+LGV YEF+ G PF T Q+ + I + +P + + + I LLK
Sbjct: 187 VDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFP---DFVTEGARDLISRLLKH 243
Query: 63 DPTQRPSGHQVRRLP 77
+P+QRP +V P
Sbjct: 244 NPSQRPMLREVLEHP 258
>pdb|2XNE|A Chain A, Structure Of Aurora-A Bound To An Imidazopyrazine
Inhibitor
Length = 272
Score = 47.0 bits (110), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 26/75 (34%), Positives = 38/75 (50%), Gaps = 3/75 (4%)
Query: 3 VDWWALGVCIYEFVTGVLPFSDETPQKVFDNILANQLEWPEDEEALNPSTEETILALLKS 62
VD W+LGV YEF+ G PF T Q+ + I + +P + + + I LLK
Sbjct: 190 VDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFP---DFVTEGARDLISRLLKH 246
Query: 63 DPTQRPSGHQVRRLP 77
+P+QRP +V P
Sbjct: 247 NPSQRPMLREVLEHP 261
>pdb|2XRU|A Chain A, Aurora-A T288e Complexed With Pha-828300
Length = 280
Score = 47.0 bits (110), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 26/75 (34%), Positives = 38/75 (50%), Gaps = 3/75 (4%)
Query: 3 VDWWALGVCIYEFVTGVLPFSDETPQKVFDNILANQLEWPEDEEALNPSTEETILALLKS 62
VD W+LGV YEF+ G PF T Q+ + I + +P + + + I LLK
Sbjct: 187 VDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFP---DFVTEGARDLISRLLKH 243
Query: 63 DPTQRPSGHQVRRLP 77
+P+QRP +V P
Sbjct: 244 NPSQRPMLREVLEHP 258
>pdb|2WTV|A Chain A, Aurora-A Inhibitor Structure
pdb|2WTV|B Chain B, Aurora-A Inhibitor Structure
pdb|2WTV|C Chain C, Aurora-A Inhibitor Structure
pdb|2WTV|D Chain D, Aurora-A Inhibitor Structure
Length = 285
Score = 47.0 bits (110), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 26/75 (34%), Positives = 38/75 (50%), Gaps = 3/75 (4%)
Query: 3 VDWWALGVCIYEFVTGVLPFSDETPQKVFDNILANQLEWPEDEEALNPSTEETILALLKS 62
VD W+LGV YEF+ G PF T Q+ + I + +P + + + I LLK
Sbjct: 192 VDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFP---DFVTEGARDLISRLLKH 248
Query: 63 DPTQRPSGHQVRRLP 77
+P+QRP +V P
Sbjct: 249 NPSQRPMLREVLEHP 263
>pdb|3H0Y|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|B Chain B, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|C Chain C, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H10|A Chain A, Aurora A Inhibitor Complex
pdb|3H10|B Chain B, Aurora A Inhibitor Complex
pdb|3H10|D Chain D, Aurora A Inhibitor Complex
pdb|3P9J|A Chain A, Aurora A Kinase Domain With Phthalazinone Pyrazole
Inhibitor
Length = 268
Score = 47.0 bits (110), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 26/75 (34%), Positives = 38/75 (50%), Gaps = 3/75 (4%)
Query: 3 VDWWALGVCIYEFVTGVLPFSDETPQKVFDNILANQLEWPEDEEALNPSTEETILALLKS 62
VD W+LGV YEF+ G PF T Q+ + I + +P + + + I LLK
Sbjct: 187 VDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFP---DFVTEGARDLISRLLKH 243
Query: 63 DPTQRPSGHQVRRLP 77
+P+QRP +V P
Sbjct: 244 NPSQRPMLREVLEHP 258
>pdb|1MQ4|A Chain A, Crystal Structure Of Aurora-A Protein Kinase
pdb|2NP8|A Chain A, Structural Basis For The Inhibition Of Aurora A Kinase By
A Novel Class Of High Affinity Disubstituted Pyrimidine
Inhibitors
pdb|2X81|A Chain A, Structure Of Aurora A In Complex With Mln8054
pdb|3MYG|A Chain A, Aurora A Kinase Complexed With Sch 1473759
pdb|3VAP|A Chain A, Synthesis And Sar Studies Of Imidazo-[1,2-A]-Pyrazine
Aurora Kinase Inhibitors With Improved Off Target Kinase
Selectivity
Length = 272
Score = 47.0 bits (110), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 26/75 (34%), Positives = 38/75 (50%), Gaps = 3/75 (4%)
Query: 3 VDWWALGVCIYEFVTGVLPFSDETPQKVFDNILANQLEWPEDEEALNPSTEETILALLKS 62
VD W+LGV YEF+ G PF T Q+ + I + +P + + + I LLK
Sbjct: 191 VDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFP---DFVTEGARDLISRLLKH 247
Query: 63 DPTQRPSGHQVRRLP 77
+P+QRP +V P
Sbjct: 248 NPSQRPMLREVLEHP 262
>pdb|1MUO|A Chain A, Crystal Structure Of Aurora-2, An Oncogenic Serine-
Threonine Kinase
Length = 297
Score = 47.0 bits (110), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 26/75 (34%), Positives = 38/75 (50%), Gaps = 3/75 (4%)
Query: 3 VDWWALGVCIYEFVTGVLPFSDETPQKVFDNILANQLEWPEDEEALNPSTEETILALLKS 62
VD W+LGV YEF+ G PF T Q+ + I + +P + + + I LLK
Sbjct: 204 VDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFP---DFVTEGARDLISRLLKH 260
Query: 63 DPTQRPSGHQVRRLP 77
+P+QRP +V P
Sbjct: 261 NPSQRPMLREVLEHP 275
>pdb|3R21|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|3R22|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|4DHF|A Chain A, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
pdb|4DHF|B Chain B, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
Length = 271
Score = 47.0 bits (110), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 26/75 (34%), Positives = 38/75 (50%), Gaps = 3/75 (4%)
Query: 3 VDWWALGVCIYEFVTGVLPFSDETPQKVFDNILANQLEWPEDEEALNPSTEETILALLKS 62
VD W+LGV YEF+ G PF T Q+ + I + +P + + + I LLK
Sbjct: 190 VDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFP---DFVTEGARDLISRLLKH 246
Query: 63 DPTQRPSGHQVRRLP 77
+P+QRP +V P
Sbjct: 247 NPSQRPMLREVLEHP 261
>pdb|3O50|A Chain A, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O50|B Chain B, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O51|A Chain A, Crystal Structure Of Anthranilamide 10 Bound To Auroraa
pdb|3EFW|A Chain A, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
pdb|3EFW|B Chain B, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
Length = 267
Score = 47.0 bits (110), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 26/75 (34%), Positives = 38/75 (50%), Gaps = 3/75 (4%)
Query: 3 VDWWALGVCIYEFVTGVLPFSDETPQKVFDNILANQLEWPEDEEALNPSTEETILALLKS 62
VD W+LGV YEF+ G PF T Q+ + I + +P + + + I LLK
Sbjct: 186 VDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFP---DFVTEGARDLISRLLKH 242
Query: 63 DPTQRPSGHQVRRLP 77
+P+QRP +V P
Sbjct: 243 NPSQRPMLREVLEHP 257
>pdb|2WQE|A Chain A, Structure Of S155r Aurora-A Somatic Mutant
Length = 262
Score = 47.0 bits (110), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 26/75 (34%), Positives = 38/75 (50%), Gaps = 3/75 (4%)
Query: 3 VDWWALGVCIYEFVTGVLPFSDETPQKVFDNILANQLEWPEDEEALNPSTEETILALLKS 62
VD W+LGV YEF+ G PF T Q+ + I + +P + + + I LLK
Sbjct: 184 VDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFP---DFVTEGARDLISRLLKH 240
Query: 63 DPTQRPSGHQVRRLP 77
+P+QRP +V P
Sbjct: 241 NPSQRPMLREVLEHP 255
>pdb|3HA6|A Chain A, Crystal Structure Of Aurora A In Complex With Tpx2 And
Compound 10
Length = 268
Score = 47.0 bits (110), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 26/75 (34%), Positives = 38/75 (50%), Gaps = 3/75 (4%)
Query: 3 VDWWALGVCIYEFVTGVLPFSDETPQKVFDNILANQLEWPEDEEALNPSTEETILALLKS 62
VD W+LGV YEF+ G PF T Q+ + I + +P + + + I LLK
Sbjct: 187 VDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFP---DFVTEGARDLISRLLKH 243
Query: 63 DPTQRPSGHQVRRLP 77
+P+QRP +V P
Sbjct: 244 NPSQRPMLREVLEHP 258
>pdb|2J50|A Chain A, Structure Of Aurora-2 In Complex With Pha-739358
pdb|2J50|B Chain B, Structure Of Aurora-2 In Complex With Pha-739358
Length = 280
Score = 47.0 bits (110), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 26/75 (34%), Positives = 38/75 (50%), Gaps = 3/75 (4%)
Query: 3 VDWWALGVCIYEFVTGVLPFSDETPQKVFDNILANQLEWPEDEEALNPSTEETILALLKS 62
VD W+LGV YEF+ G PF T Q+ + I + +P + + + I LLK
Sbjct: 187 VDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFP---DFVTEGARDLISRLLKH 243
Query: 63 DPTQRPSGHQVRRLP 77
+P+QRP +V P
Sbjct: 244 NPSQRPMLREVLEHP 258
>pdb|3QBN|A Chain A, Structure Of Human Aurora A In Complex With A
Diaminopyrimidine
Length = 281
Score = 47.0 bits (110), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 26/75 (34%), Positives = 38/75 (50%), Gaps = 3/75 (4%)
Query: 3 VDWWALGVCIYEFVTGVLPFSDETPQKVFDNILANQLEWPEDEEALNPSTEETILALLKS 62
VD W+LGV YEF+ G PF T Q+ + I + +P + + + I LLK
Sbjct: 188 VDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFP---DFVTEGARDLISRLLKH 244
Query: 63 DPTQRPSGHQVRRLP 77
+P+QRP +V P
Sbjct: 245 NPSQRPMLREVLEHP 259
>pdb|2JED|A Chain A, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution.
pdb|2JED|B Chain B, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution
Length = 352
Score = 47.0 bits (110), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 22/86 (25%), Positives = 46/86 (53%), Gaps = 4/86 (4%)
Query: 3 VDWWALGVCIYEFVTGVLPFSDETPQKVFDNILANQLEWPEDEEALNPSTEETILALLKS 62
VDWW+ GV +YE + G PF + +++F +I + +P L ++ ++ L
Sbjct: 200 VDWWSFGVLLYEMLIGQSPFHGQDEEELFHSIRMDNPFYP---RWLEKEAKDLLVKLFVR 256
Query: 63 DPTQRPSGH-QVRRLPMFKDYDWDSI 87
+P +R +R+ P+F++ +W+ +
Sbjct: 257 EPEKRLGVRGDIRQHPLFREINWEEL 282
>pdb|1XJD|A Chain A, Crystal Structure Of Pkc-Theta Complexed With
Staurosporine At 2a Resolution
Length = 345
Score = 47.0 bits (110), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 22/86 (25%), Positives = 46/86 (53%), Gaps = 4/86 (4%)
Query: 3 VDWWALGVCIYEFVTGVLPFSDETPQKVFDNILANQLEWPEDEEALNPSTEETILALLKS 62
VDWW+ GV +YE + G PF + +++F +I + +P L ++ ++ L
Sbjct: 199 VDWWSFGVLLYEMLIGQSPFHGQDEEELFHSIRMDNPFYP---RWLEKEAKDLLVKLFVR 255
Query: 63 DPTQRPSGH-QVRRLPMFKDYDWDSI 87
+P +R +R+ P+F++ +W+ +
Sbjct: 256 EPEKRLGVRGDIRQHPLFREINWEEL 281
>pdb|2BMC|A Chain A, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|B Chain B, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|C Chain C, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|D Chain D, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|E Chain E, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|F Chain F, Aurora-2 T287d T288d Complexed With Pha-680632
Length = 306
Score = 46.6 bits (109), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 26/75 (34%), Positives = 38/75 (50%), Gaps = 3/75 (4%)
Query: 3 VDWWALGVCIYEFVTGVLPFSDETPQKVFDNILANQLEWPEDEEALNPSTEETILALLKS 62
VD W+LGV YEF+ G PF T Q+ + I + +P + + + I LLK
Sbjct: 213 VDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFP---DFVTEGARDLISRLLKH 269
Query: 63 DPTQRPSGHQVRRLP 77
+P+QRP +V P
Sbjct: 270 NPSQRPMLREVLEHP 284
>pdb|2J4Z|A Chain A, Structure Of Aurora-2 In Complex With Pha-680626
pdb|2J4Z|B Chain B, Structure Of Aurora-2 In Complex With Pha-680626
Length = 306
Score = 46.6 bits (109), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 26/75 (34%), Positives = 38/75 (50%), Gaps = 3/75 (4%)
Query: 3 VDWWALGVCIYEFVTGVLPFSDETPQKVFDNILANQLEWPEDEEALNPSTEETILALLKS 62
VD W+LGV YEF+ G PF T Q+ + I + +P + + + I LLK
Sbjct: 213 VDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFP---DFVTEGARDLISRLLKH 269
Query: 63 DPTQRPSGHQVRRLP 77
+P+QRP +V P
Sbjct: 270 NPSQRPMLREVLEHP 284
>pdb|1VZO|A Chain A, The Structure Of The N-Terminal Kinase Domain Of Msk1
Reveals A Novel Autoinhibitory Conformation For A Dual
Kinase Protein
Length = 355
Score = 46.2 bits (108), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 27/96 (28%), Positives = 48/96 (50%), Gaps = 12/96 (12%)
Query: 1 SGVDWWALGVCIYEFVTGVLPFS----DETPQKVFDNILANQLEWPEDEEALNPSTEETI 56
VDWW+LGV +YE +TG PF+ + ++ IL ++ +P++ AL ++ I
Sbjct: 241 KAVDWWSLGVLMYELLTGASPFTVDGEKNSQAEISRRILKSEPPYPQEMSAL---AKDLI 297
Query: 57 LALLKSDPTQR-----PSGHQVRRLPMFKDYDWDSI 87
LL DP +R +++ F+ +WD +
Sbjct: 298 QRLLMKDPKKRLGCGPRDADEIKEHLFFQKINWDDL 333
>pdb|2WTK|C Chain C, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
pdb|2WTK|F Chain F, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
Length = 305
Score = 46.2 bits (108), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 24/78 (30%), Positives = 39/78 (50%), Gaps = 3/78 (3%)
Query: 3 VDWWALGVCIYEFVTGVLPFSDETPQKVFDNILANQLEWPEDEEALNPSTEETILALLKS 62
VD W+ GV +Y TG+ PF + K+F+NI P D P + + +L+
Sbjct: 194 VDIWSAGVTLYNITTGLYPFEGDNIYKLFENIGKGSYAIPGD---CGPPLSDLLKGMLEY 250
Query: 63 DPTQRPSGHQVRRLPMFK 80
+P +R S Q+R+ F+
Sbjct: 251 EPAKRFSIRQIRQHSWFR 268
>pdb|3COH|A Chain A, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
pdb|3COH|B Chain B, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
Length = 268
Score = 46.2 bits (108), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 26/75 (34%), Positives = 37/75 (49%), Gaps = 3/75 (4%)
Query: 3 VDWWALGVCIYEFVTGVLPFSDETPQKVFDNILANQLEWPEDEEALNPSTEETILALLKS 62
VD W+LGV YEF+ G PF T Q + I + +P + + + I LLK
Sbjct: 187 VDLWSLGVLCYEFLVGKPPFEANTYQDTYKRISRVEFTFP---DFVTEGARDLISRLLKH 243
Query: 63 DPTQRPSGHQVRRLP 77
+P+QRP +V P
Sbjct: 244 NPSQRPMLREVLEHP 258
>pdb|3H4J|B Chain B, Crystal Structure Of Pombe Ampk Kdaid Fragment
pdb|3H4J|A Chain A, Crystal Structure Of Pombe Ampk Kdaid Fragment
Length = 336
Score = 46.2 bits (108), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 24/77 (31%), Positives = 40/77 (51%), Gaps = 3/77 (3%)
Query: 3 VDWWALGVCIYEFVTGVLPFSDETPQKVFDNILANQLEWPEDEEALNPSTEETILALLKS 62
VD W+ G+ +Y + G LPF DE +F + + P + L+P + I ++ +
Sbjct: 189 VDVWSCGIVLYVMLVGRLPFDDEFIPNLFKKVNSCVYVMP---DFLSPGAQSLIRRMIVA 245
Query: 63 DPTQRPSGHQVRRLPMF 79
DP QR + ++RR P F
Sbjct: 246 DPMQRITIQEIRRDPWF 262
>pdb|3KK8|A Chain A, Camkii Substrate Complex A
Length = 284
Score = 46.2 bits (108), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 23/76 (30%), Positives = 40/76 (52%), Gaps = 1/76 (1%)
Query: 3 VDWWALGVCIYEFVTGVLPFSDETPQKVFDNILANQLEWPEDE-EALNPSTEETILALLK 61
VD WA GV +Y + G PF DE +++ I A ++P E + + P + I ++L
Sbjct: 188 VDIWACGVILYILLVGYPPFWDEDQHRLYAQIKAGAYDYPSPEWDTVTPEAKSLIDSMLT 247
Query: 62 SDPTQRPSGHQVRRLP 77
+P +R + Q ++P
Sbjct: 248 VNPKKRITADQALKVP 263
>pdb|3QAL|E Chain E, Crystal Structure Of Arg280ala Mutant Of Catalytic Subunit
Of Camp- Dependent Protein Kinase
Length = 350
Score = 46.2 bits (108), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 17/42 (40%), Positives = 27/42 (64%)
Query: 1 SGVDWWALGVCIYEFVTGVLPFSDETPQKVFDNILANQLEWP 42
VDWWALGV IYE G PF + P ++++ I++ ++ +P
Sbjct: 217 KAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFP 258
>pdb|2R5T|A Chain A, Crystal Structure Of Inactive Serum And Glucocorticoid-
Regulated Kinase 1 In Complex With Amp-Pnp
pdb|3HDM|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 1
pdb|3HDN|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 2
Length = 373
Score = 46.2 bits (108), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 25/90 (27%), Positives = 43/90 (47%), Gaps = 7/90 (7%)
Query: 3 VDWWALGVCIYEFVTGVLPFSDETPQKVFDNILANQLEWPEDEEALNPSTEETILALLKS 62
VDWW LG +YE + G+ PF +++DNIL L+ + + S + LL+
Sbjct: 220 VDWWCLGAVLYEMLYGLPPFYSRNTAEMYDNILNKPLQLKPN---ITNSARHLLEGLLQK 276
Query: 63 DPTQRPSGH----QVRRLPMFKDYDWDSIL 88
D T+R +++ F +WD ++
Sbjct: 277 DRTKRLGAKDDFMEIKSHVFFSLINWDDLI 306
>pdb|3KK9|A Chain A, Camkii Substrate Complex B
Length = 282
Score = 46.2 bits (108), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 23/76 (30%), Positives = 40/76 (52%), Gaps = 1/76 (1%)
Query: 3 VDWWALGVCIYEFVTGVLPFSDETPQKVFDNILANQLEWPEDE-EALNPSTEETILALLK 61
VD WA GV +Y + G PF DE +++ I A ++P E + + P + I ++L
Sbjct: 187 VDIWACGVILYILLVGYPPFWDEDQHRLYAQIKAGAYDYPSPEWDTVTPEAKSLIDSMLT 246
Query: 62 SDPTQRPSGHQVRRLP 77
+P +R + Q ++P
Sbjct: 247 VNPKKRITADQALKVP 262
>pdb|3KL8|A Chain A, Camkiintide Inhibitor Complex
pdb|3KL8|C Chain C, Camkiintide Inhibitor Complex
pdb|3KL8|E Chain E, Camkiintide Inhibitor Complex
pdb|3KL8|G Chain G, Camkiintide Inhibitor Complex
pdb|3KL8|I Chain I, Camkiintide Inhibitor Complex
Length = 269
Score = 46.2 bits (108), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 23/76 (30%), Positives = 40/76 (52%), Gaps = 1/76 (1%)
Query: 3 VDWWALGVCIYEFVTGVLPFSDETPQKVFDNILANQLEWPEDE-EALNPSTEETILALLK 61
VD WA GV +Y + G PF DE +++ I A ++P E + + P + I ++L
Sbjct: 188 VDIWACGVILYILLVGYPPFWDEDQHRLYAQIKAGAYDYPSPEWDTVTPEAKSLIDSMLT 247
Query: 62 SDPTQRPSGHQVRRLP 77
+P +R + Q ++P
Sbjct: 248 VNPKKRITADQALKVP 263
>pdb|2BDW|A Chain A, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
pdb|2BDW|B Chain B, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
Length = 362
Score = 45.8 bits (107), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 23/76 (30%), Positives = 40/76 (52%), Gaps = 1/76 (1%)
Query: 3 VDWWALGVCIYEFVTGVLPFSDETPQKVFDNILANQLEWPEDE-EALNPSTEETILALLK 61
VD WA GV +Y + G PF DE +++ I A ++P E + + P + I ++L
Sbjct: 211 VDIWACGVILYILLVGYPPFWDEDQHRLYAQIKAGAYDYPSPEWDTVTPEAKSLIDSMLT 270
Query: 62 SDPTQRPSGHQVRRLP 77
+P +R + Q ++P
Sbjct: 271 VNPKKRITADQALKVP 286
>pdb|4AW2|A Chain A, Crystal Structure Of Cdc42 Binding Protein Kinase Alpha
(Mrck Alpha)
Length = 437
Score = 45.8 bits (107), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 24/88 (27%), Positives = 45/88 (51%), Gaps = 4/88 (4%)
Query: 4 DWWALGVCIYEFVTGVLPFSDETPQKVFDNILANQ--LEWPEDEEALNPSTEETILALLK 61
DWW+LGVC+YE + G PF E+ + + I+ ++ ++P ++ + ++ I L+
Sbjct: 263 DWWSLGVCMYEMLYGETPFYAESLVETYGKIMNHKERFQFPTQVTDVSENAKDLIRRLIC 322
Query: 62 SDPTQRPSG--HQVRRLPMFKDYDWDSI 87
S + ++ P F DWD+I
Sbjct: 323 SREHRLGQNGIEDFKKHPFFSGIDWDNI 350
>pdb|3NYN|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYN|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYO|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
pdb|3NYO|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
Length = 576
Score = 45.8 bits (107), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 26/90 (28%), Positives = 40/90 (44%), Gaps = 6/90 (6%)
Query: 4 DWWALGVCIYEFVTGVLPFSDETPQKVFDNILANQLEWPED-EEALNPSTEETILALLKS 62
DWWALG +YE + G PF + + + E PE+ E +P LL
Sbjct: 367 DWWALGCLLYEMIAGQSPFQQRKKKIKREEVERLVKEVPEEYSERFSPQARSLCSQLLCK 426
Query: 63 DPTQR-----PSGHQVRRLPMFKDYDWDSI 87
DP +R S +V+ P+FK ++ +
Sbjct: 427 DPAERLGCRGGSAREVKEHPLFKKLNFKRL 456
>pdb|2JC6|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase 1d
pdb|2JC6|C Chain C, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase 1d
Length = 334
Score = 45.4 bits (106), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 25/77 (32%), Positives = 41/77 (53%), Gaps = 1/77 (1%)
Query: 2 GVDWWALGVCIYEFVTGVLPFSDETPQKVFDNILANQLEWPEDE-EALNPSTEETILALL 60
VD W++GV Y + G PF DE K+F+ IL + E+ + ++ S ++ I L+
Sbjct: 202 AVDCWSIGVIAYILLCGYPPFYDENDSKLFEQILKAEYEFDSPYWDDISDSAKDFIRNLM 261
Query: 61 KSDPTQRPSGHQVRRLP 77
+ DP +R + Q R P
Sbjct: 262 EKDPNKRYTCEQAARHP 278
>pdb|2ACX|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
pdb|2ACX|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
Length = 576
Score = 45.4 bits (106), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 26/90 (28%), Positives = 40/90 (44%), Gaps = 6/90 (6%)
Query: 4 DWWALGVCIYEFVTGVLPFSDETPQKVFDNILANQLEWPED-EEALNPSTEETILALLKS 62
DWWALG +YE + G PF + + + E PE+ E +P LL
Sbjct: 367 DWWALGCLLYEMIAGQSPFQQRKKKIKREEVERLVKEVPEEYSERFSPQARSLCSQLLCK 426
Query: 63 DPTQR-----PSGHQVRRLPMFKDYDWDSI 87
DP +R S +V+ P+FK ++ +
Sbjct: 427 DPAERLGCRGGSAREVKEHPLFKKLNFKRL 456
>pdb|1ZRZ|A Chain A, Crystal Structure Of The Catalytic Domain Of Atypical
Protein Kinase C-Iota
Length = 364
Score = 45.1 bits (105), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 28/100 (28%), Positives = 46/100 (46%), Gaps = 18/100 (18%)
Query: 3 VDWWALGVCIYEFVTGVLPF----SDETPQK-----VFDNILANQLEWPEDEEALNPSTE 53
VDWWALGV ++E + G PF S + P + +F IL Q+ P +++
Sbjct: 202 VDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLFQVILEKQIRIP---RSMSVKAA 258
Query: 54 ETILALLKSDPTQR------PSGHQVRRLPMFKDYDWDSI 87
+ + L DP +R ++ P F++ DWD +
Sbjct: 259 SVLKSFLNKDPKERLGCLPQTGFADIQGHPFFRNVDWDMM 298
>pdb|3ZGW|A Chain A, Crystal Structure Of Maternal Embryonic Leucine Zipper
Kinase (melk) In Complex With Amp-pnp
Length = 347
Score = 44.3 bits (103), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 23/85 (27%), Positives = 46/85 (54%), Gaps = 4/85 (4%)
Query: 1 SGVDWWALGVCIYEFVTGVLPFSDETPQKVFDNILANQLEWPEDEEALNPSTEETILALL 60
S D W++G+ +Y + G LPF D+ ++ I+ + + P + L+PS+ + +L
Sbjct: 189 SEADVWSMGILLYVLMCGFLPFDDDNVMALYKKIMRGKYDVP---KWLSPSSILLLQQML 245
Query: 61 KSDPTQRPSGHQVRRLP-MFKDYDW 84
+ DP +R S + P + +DY++
Sbjct: 246 QVDPKKRISMKNLLNHPWIMQDYNY 270
>pdb|2Y94|A Chain A, Structure Of An Active Form Of Mammalian Ampk
Length = 476
Score = 43.9 bits (102), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 25/78 (32%), Positives = 37/78 (47%), Gaps = 3/78 (3%)
Query: 3 VDWWALGVCIYEFVTGVLPFSDETPQKVFDNILANQLEWPEDEEALNPSTEETILALLKS 62
VD W+ GV +Y + G LPF D+ +F I P + LNPS + +L+
Sbjct: 197 VDIWSSGVILYALLCGTLPFDDDHVPTLFKKICDGIFYTP---QYLNPSVISLLKHMLQV 253
Query: 63 DPTQRPSGHQVRRLPMFK 80
DP +R + +R FK
Sbjct: 254 DPMKRATIKDIREHEWFK 271
>pdb|1KOB|A Chain A, Twitchin Kinase Fragment (Aplysia), Autoregulated Protein
Kinase Domain
pdb|1KOB|B Chain B, Twitchin Kinase Fragment (Aplysia), Autoregulated Protein
Kinase Domain
Length = 387
Score = 43.5 bits (101), Expect = 3e-05, Method: Composition-based stats.
Identities = 24/80 (30%), Positives = 42/80 (52%), Gaps = 5/80 (6%)
Query: 4 DWWALGVCIYEFVTGVLPFSDETPQKVFDNILANQLEWPEDEEA---LNPSTEETILALL 60
D WA+GV Y ++G+ PF+ E + N+ + +W DE+A ++P ++ I LL
Sbjct: 232 DMWAIGVLGYVLLSGLSPFAGEDDLETLQNV--KRCDWEFDEDAFSSVSPEAKDFIKNLL 289
Query: 61 KSDPTQRPSGHQVRRLPMFK 80
+ +P +R + H P K
Sbjct: 290 QKEPRKRLTVHDALEHPWLK 309
>pdb|3D5W|A Chain A, Crystal Structure Of A Phosphorylated Polo-Like Kinase 1
(Plk1) Catalytic Domain In Complex With Adp
Length = 317
Score = 43.1 bits (100), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 22/67 (32%), Positives = 32/67 (47%), Gaps = 3/67 (4%)
Query: 3 VDWWALGVCIYEFVTGVLPFSDETPQKVFDNILANQLEWPEDEEALNPSTEETILALLKS 62
VD W+LG +Y + G PF ++ + I N+ P +NP I +L +
Sbjct: 223 VDIWSLGCILYTLLVGKPPFETSCLKETYIRIKKNEYSVPRH---INPVASALIRRMLHA 279
Query: 63 DPTQRPS 69
DPT RPS
Sbjct: 280 DPTLRPS 286
>pdb|3D5U|A Chain A, Crystal Structure Of A Wildtype Polo-Like Kinase 1 (Plk1)
Catalytic Domain
Length = 317
Score = 43.1 bits (100), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 22/67 (32%), Positives = 32/67 (47%), Gaps = 3/67 (4%)
Query: 3 VDWWALGVCIYEFVTGVLPFSDETPQKVFDNILANQLEWPEDEEALNPSTEETILALLKS 62
VD W+LG +Y + G PF ++ + I N+ P +NP I +L +
Sbjct: 223 VDIWSLGCILYTLLVGKPPFETSCLKETYIRIKKNEYSVPRH---INPVASALIRRMLHA 279
Query: 63 DPTQRPS 69
DPT RPS
Sbjct: 280 DPTLRPS 286
>pdb|3D5V|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain.
pdb|3DB8|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 041
pdb|3DBC|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 257
pdb|3DBD|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 094
Length = 317
Score = 43.1 bits (100), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 22/67 (32%), Positives = 32/67 (47%), Gaps = 3/67 (4%)
Query: 3 VDWWALGVCIYEFVTGVLPFSDETPQKVFDNILANQLEWPEDEEALNPSTEETILALLKS 62
VD W+LG +Y + G PF ++ + I N+ P +NP I +L +
Sbjct: 223 VDIWSLGCILYTLLVGKPPFETSCLKETYIRIKKNEYSVPRH---INPVASALIRRMLHA 279
Query: 63 DPTQRPS 69
DPT RPS
Sbjct: 280 DPTLRPS 286
>pdb|3DB6|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 902
pdb|3D5X|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Wortmannin.
pdb|3DBE|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 557
pdb|3DBF|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 562
Length = 301
Score = 43.1 bits (100), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 22/67 (32%), Positives = 32/67 (47%), Gaps = 3/67 (4%)
Query: 3 VDWWALGVCIYEFVTGVLPFSDETPQKVFDNILANQLEWPEDEEALNPSTEETILALLKS 62
VD W+LG +Y + G PF ++ + I N+ P +NP I +L +
Sbjct: 207 VDIWSLGCILYTLLVGKPPFETSCLKETYIRIKKNEYSVPRH---INPVASALIRRMLHA 263
Query: 63 DPTQRPS 69
DPT RPS
Sbjct: 264 DPTLRPS 270
>pdb|2F2U|A Chain A, Crystal Structure Of The Rho-Kinase Kinase Domain
pdb|2F2U|B Chain B, Crystal Structure Of The Rho-Kinase Kinase Domain
pdb|2H9V|A Chain A, Structural Basis For Induced-Fit Binding Of Rho-Kinase To
The Inhibitor Y27632
Length = 402
Score = 43.1 bits (100), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 26/90 (28%), Positives = 48/90 (53%), Gaps = 7/90 (7%)
Query: 4 DWWALGVCIYEFVTGVLPFSDETPQKVFDNIL--ANQLEWPEDEEALNPSTEETILALLK 61
DWW++GV ++E + G PF ++ + I+ N L +PED E ++ + I A L
Sbjct: 261 DWWSVGVFLFEMLVGDTPFYADSLVGTYSKIMDHKNSLCFPEDAE-ISKHAKNLICAFLT 319
Query: 62 SDPTQ--RPSGHQVRRLPMFKD--YDWDSI 87
+ R ++++ P FK+ ++WD+I
Sbjct: 320 DREVRLGRNGVEEIKQHPFFKNDQWNWDNI 349
>pdb|3IS5|A Chain A, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|B Chain B, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|C Chain C, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|D Chain D, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|E Chain E, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|F Chain F, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
Length = 285
Score = 42.7 bits (99), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 23/77 (29%), Positives = 37/77 (48%)
Query: 4 DWWALGVCIYEFVTGVLPFSDETPQKVFDNILANQLEWPEDEEALNPSTEETILALLKSD 63
D W+ GV +Y +TG LPF+ + ++V + + + L P + + +L D
Sbjct: 207 DIWSAGVVMYFLLTGCLPFTGTSLEEVQQKATYKEPNYAVECRPLTPQAVDLLKQMLTKD 266
Query: 64 PTQRPSGHQVRRLPMFK 80
P +RPS QV FK
Sbjct: 267 PERRPSAAQVLHHEWFK 283
>pdb|4FG8|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
pdb|4FG8|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
Length = 315
Score = 42.7 bits (99), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 24/78 (30%), Positives = 41/78 (52%), Gaps = 1/78 (1%)
Query: 1 SGVDWWALGVCIYEFVTGVLPFSDETPQKVFDNILANQLEWPEDE-EALNPSTEETILAL 59
VD W++GV Y + G PF DE K+F+ IL + E+ + ++ S ++ I L
Sbjct: 197 KAVDCWSIGVIAYILLCGYPPFYDENDAKLFEQILKAEYEFDSPYWDDISDSAKDFIRHL 256
Query: 60 LKSDPTQRPSGHQVRRLP 77
++ DP +R + Q + P
Sbjct: 257 MEKDPEKRFTCEQALQHP 274
>pdb|4FG9|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FG9|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FGB|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I Apo Form
Length = 320
Score = 42.7 bits (99), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 24/78 (30%), Positives = 41/78 (52%), Gaps = 1/78 (1%)
Query: 1 SGVDWWALGVCIYEFVTGVLPFSDETPQKVFDNILANQLEWPEDE-EALNPSTEETILAL 59
VD W++GV Y + G PF DE K+F+ IL + E+ + ++ S ++ I L
Sbjct: 197 KAVDCWSIGVIAYILLCGYPPFYDENDAKLFEQILKAEYEFDSPYWDDISDSAKDFIRHL 256
Query: 60 LKSDPTQRPSGHQVRRLP 77
++ DP +R + Q + P
Sbjct: 257 MEKDPEKRFTCEQALQHP 274
>pdb|4FG7|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-293 In Complex With Atp
Length = 293
Score = 42.7 bits (99), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 24/78 (30%), Positives = 41/78 (52%), Gaps = 1/78 (1%)
Query: 1 SGVDWWALGVCIYEFVTGVLPFSDETPQKVFDNILANQLEWPEDE-EALNPSTEETILAL 59
VD W++GV Y + G PF DE K+F+ IL + E+ + ++ S ++ I L
Sbjct: 197 KAVDCWSIGVIAYILLCGYPPFYDENDAKLFEQILKAEYEFDSPYWDDISDSAKDFIRHL 256
Query: 60 LKSDPTQRPSGHQVRRLP 77
++ DP +R + Q + P
Sbjct: 257 MEKDPEKRFTCEQALQHP 274
>pdb|1TKI|A Chain A, Autoinhibited Serine Kinase Domain Of The Giant Muscle
Protein Titin
pdb|1TKI|B Chain B, Autoinhibited Serine Kinase Domain Of The Giant Muscle
Protein Titin
Length = 321
Score = 42.4 bits (98), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 19/56 (33%), Positives = 32/56 (57%), Gaps = 2/56 (3%)
Query: 1 SGVDWWALGVCIYEFVTGVLPFSDETPQKVFDNILANQLEWPEDEEALNPSTEETI 56
+ D W+LG +Y ++G+ PF ET Q++ +NI+ E+ DEEA + E +
Sbjct: 182 TATDMWSLGTLVYVLLSGINPFLAETNQQIIENIM--NAEYTFDEEAFKEISIEAM 235
>pdb|3DAJ|A Chain A, Crystal Structure Of Aurora A Complexed With An Inhibitor
Discovered Through Site-Directed Dynamic Tethering
Length = 272
Score = 42.4 bits (98), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 25/78 (32%), Positives = 39/78 (50%), Gaps = 3/78 (3%)
Query: 3 VDWWALGVCIYEFVTGVLPFSDETPQKVFDNILANQLEWPEDEEALNPSTEETILALLKS 62
VD W+LGV YEF+ G+ PF T Q+ + I + +P + + + I LLK
Sbjct: 191 VDLWSLGVLCYEFLVGMPPFEAHTYQETYRRISRVEFTFP---DFVTEGARDLISRLLKH 247
Query: 63 DPTQRPSGHQVRRLPMFK 80
+ +QR + +V P K
Sbjct: 248 NASQRLTLAEVLEHPWIK 265
>pdb|1A06|A Chain A, Calmodulin-Dependent Protein Kinase From Rat
Length = 332
Score = 42.4 bits (98), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 24/78 (30%), Positives = 41/78 (52%), Gaps = 1/78 (1%)
Query: 1 SGVDWWALGVCIYEFVTGVLPFSDETPQKVFDNILANQLEWPEDE-EALNPSTEETILAL 59
VD W++GV Y + G PF DE K+F+ IL + E+ + ++ S ++ I L
Sbjct: 197 KAVDCWSIGVIAYILLCGYPPFYDENDAKLFEQILKAEYEFDSPYWDDISDSAKDFIRHL 256
Query: 60 LKSDPTQRPSGHQVRRLP 77
++ DP +R + Q + P
Sbjct: 257 MEKDPEKRFTCEQALQHP 274
>pdb|3D14|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly,
Lys240->arg, Met302- >leu) In Complex With
1-{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)- Ethyl]-
Thiazol-2-Yl}-3-(3-Trifluoromethyl-Phenyl)-Urea
pdb|3DJ5|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 290.
pdb|3DJ6|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 823.
pdb|3DJ7|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 130.
pdb|3D15|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
1-(3-Chloro-Phenyl)-3-
{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)-
Ethyl]-Thiazol-2- Yl}-Urea [sns-314]
pdb|3D2I|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With 1-{5-[2-(1-Methyl-1h-
Pyrazolo[4,
3-D]pyrimidin-7-Ylamino)-Ethyl]-Thiazol-2-Yl}-3-
(3-Trifluoromethyl-Phenyl)-Urea
pdb|3D2K|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
[7-(2-{2-[3-(3-Chloro-
Phenyl)-Ureido]-Thiazol-5-Yl}-Ethylamino)-Pyrazolo[4,3-
D]pyrimidin-1-Yl]-Acetic Acid
Length = 272
Score = 42.4 bits (98), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 25/78 (32%), Positives = 39/78 (50%), Gaps = 3/78 (3%)
Query: 3 VDWWALGVCIYEFVTGVLPFSDETPQKVFDNILANQLEWPEDEEALNPSTEETILALLKS 62
VD W+LGV YEF+ G+ PF T Q+ + I + +P + + + I LLK
Sbjct: 191 VDLWSLGVLCYEFLVGMPPFEAHTYQETYRRISRVEFTFP---DFVTEGARDLISRLLKH 247
Query: 63 DPTQRPSGHQVRRLPMFK 80
+ +QR + +V P K
Sbjct: 248 NASQRLTLAEVLEHPWIK 265
>pdb|2VD5|A Chain A, Structure Of Human Myotonic Dystrophy Protein Kinase In
Complex With The Bisindoylmaleide Inhibitor Bim Viii
pdb|2VD5|B Chain B, Structure Of Human Myotonic Dystrophy Protein Kinase In
Complex With The Bisindoylmaleide Inhibitor Bim Viii
Length = 412
Score = 42.4 bits (98), Expect = 7e-05, Method: Composition-based stats.
Identities = 27/88 (30%), Positives = 37/88 (42%), Gaps = 4/88 (4%)
Query: 4 DWWALGVCIYEFVTGVLPFSDETPQKVFDNIL--ANQLEWPEDEEALNPSTEETILALLK 61
DWWALGV YE G PF ++ + + I+ L P +E + + I LL
Sbjct: 252 DWWALGVFAYEMFYGQTPFYADSTAETYGKIVHYKEHLSLPLVDEGVPEEARDFIQRLLC 311
Query: 62 SDPTQ--RPSGHQVRRLPMFKDYDWDSI 87
T+ R R P F DWD +
Sbjct: 312 PPETRLGRGGAGDFRTHPFFFGLDWDGL 339
>pdb|2RKU|A Chain A, Structure Of Plk1 In Complex With Bi2536
Length = 294
Score = 42.4 bits (98), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 20/67 (29%), Positives = 34/67 (50%), Gaps = 3/67 (4%)
Query: 3 VDWWALGVCIYEFVTGVLPFSDETPQKVFDNILANQLEWPEDEEALNPSTEETILALLKS 62
VD W++G +Y + G PF ++ + I N+ P+ +NP I +L++
Sbjct: 196 VDVWSIGCIMYTLLVGKPPFETSCLKETYLRIKKNEYSIPKH---INPVAASLIQKMLQT 252
Query: 63 DPTQRPS 69
DPT RP+
Sbjct: 253 DPTARPT 259
>pdb|2OU7|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|2OWB|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|3FC2|A Chain A, Plk1 In Complex With Bi6727
Length = 335
Score = 42.0 bits (97), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 20/67 (29%), Positives = 34/67 (50%), Gaps = 3/67 (4%)
Query: 3 VDWWALGVCIYEFVTGVLPFSDETPQKVFDNILANQLEWPEDEEALNPSTEETILALLKS 62
VD W++G +Y + G PF ++ + I N+ P+ +NP I +L++
Sbjct: 222 VDVWSIGCIMYTLLVGKPPFETSCLKETYLRIKKNEYSIPKH---INPVAASLIQKMLQT 278
Query: 63 DPTQRPS 69
DPT RP+
Sbjct: 279 DPTARPT 285
>pdb|3KB7|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 311
Score = 42.0 bits (97), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 20/67 (29%), Positives = 34/67 (50%), Gaps = 3/67 (4%)
Query: 3 VDWWALGVCIYEFVTGVLPFSDETPQKVFDNILANQLEWPEDEEALNPSTEETILALLKS 62
VD W++G +Y + G PF ++ + I N+ P+ +NP I +L++
Sbjct: 198 VDVWSIGCIMYTLLVGKPPFETSCLKETYLRIKKNEYSIPKH---INPVAASLIQKMLQT 254
Query: 63 DPTQRPS 69
DPT RP+
Sbjct: 255 DPTARPT 261
>pdb|2YAC|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With
Nms-P937
pdb|4A4L|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
5-(2-Amino-Pyrimidin-4-Yl)-1h-Pyrrole Inhibitor
pdb|4A4O|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
2-
(2-Amino-Pyrimidin-4-Yl)-1,5,6,
7-Tetrahydro-Pyrrolopyridin- 4-One Inhibitor
Length = 311
Score = 42.0 bits (97), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 20/67 (29%), Positives = 34/67 (50%), Gaps = 3/67 (4%)
Query: 3 VDWWALGVCIYEFVTGVLPFSDETPQKVFDNILANQLEWPEDEEALNPSTEETILALLKS 62
VD W++G +Y + G PF ++ + I N+ P+ +NP I +L++
Sbjct: 198 VDVWSIGCIMYTLLVGKPPFETSCLKETYLRIKKNEYSIPKH---INPVAASLIQKMLQT 254
Query: 63 DPTQRPS 69
DPT RP+
Sbjct: 255 DPTARPT 261
>pdb|2V5Q|A Chain A, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
pdb|2V5Q|B Chain B, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
Length = 315
Score = 42.0 bits (97), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 20/67 (29%), Positives = 34/67 (50%), Gaps = 3/67 (4%)
Query: 3 VDWWALGVCIYEFVTGVLPFSDETPQKVFDNILANQLEWPEDEEALNPSTEETILALLKS 62
VD W++G +Y + G PF ++ + I N+ P+ +NP I +L++
Sbjct: 202 VDVWSIGCIMYTLLVGKPPFETSCLKETYLRIKKNEYSIPKH---INPVAASLIQKMLQT 258
Query: 63 DPTQRPS 69
DPT RP+
Sbjct: 259 DPTARPT 265
>pdb|3THB|A Chain A, Structure Of Plk1 Kinase Domain In Complex With A
Benzolactam-Derived Inhibitor
Length = 333
Score = 42.0 bits (97), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 20/67 (29%), Positives = 34/67 (50%), Gaps = 3/67 (4%)
Query: 3 VDWWALGVCIYEFVTGVLPFSDETPQKVFDNILANQLEWPEDEEALNPSTEETILALLKS 62
VD W++G +Y + G PF ++ + I N+ P+ +NP I +L++
Sbjct: 220 VDVWSIGCIMYTLLVGKPPFETSCLKETYLRIKKNEYSIPKH---INPVAASLIQKMLQT 276
Query: 63 DPTQRPS 69
DPT RP+
Sbjct: 277 DPTARPT 283
>pdb|2X4Z|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Pf-03758309
pdb|4APP|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With (S)-N-(5-(3-Benzyl-1-Methylpiperazine-4-
Carbonyl)-6,6-Dimethyl-1,4,5,6-Tetrahydropyrrolo(3,4-C)
Pyrazol-3-Yl)-3-Phenoxybenzamide
Length = 296
Score = 41.6 bits (96), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 23/77 (29%), Positives = 38/77 (49%)
Query: 3 VDWWALGVCIYEFVTGVLPFSDETPQKVFDNILANQLEWPEDEEALNPSTEETILALLKS 62
VD W+LG+ + E V G P+ +E P K I N ++ ++PS + + LL
Sbjct: 201 VDIWSLGIMVIEMVDGEPPYFNEPPLKAMKMIRDNLPPRLKNLHKVSPSLKGFLDRLLVR 260
Query: 63 DPTQRPSGHQVRRLPMF 79
DP QR + ++ + P
Sbjct: 261 DPAQRATAAELLKHPFL 277
>pdb|2BVA|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
pdb|2BVA|B Chain B, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 292
Score = 41.2 bits (95), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 23/77 (29%), Positives = 38/77 (49%)
Query: 3 VDWWALGVCIYEFVTGVLPFSDETPQKVFDNILANQLEWPEDEEALNPSTEETILALLKS 62
VD W+LG+ + E V G P+ +E P K I N ++ ++PS + + LL
Sbjct: 197 VDIWSLGIMVIEMVDGEPPYFNEPPLKAMKMIRDNLPPRLKNLHKVSPSLKGFLDRLLVR 256
Query: 63 DPTQRPSGHQVRRLPMF 79
DP QR + ++ + P
Sbjct: 257 DPAQRATAAELLKHPFL 273
>pdb|2Q0N|A Chain A, Structure Of Human P21 Activating Kinase 4 (Pak4) In
Complex With A Consensus Peptide
Length = 301
Score = 41.2 bits (95), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 23/77 (29%), Positives = 38/77 (49%)
Query: 3 VDWWALGVCIYEFVTGVLPFSDETPQKVFDNILANQLEWPEDEEALNPSTEETILALLKS 62
VD W+LG+ + E V G P+ +E P K I N ++ ++PS + + LL
Sbjct: 206 VDIWSLGIMVIEMVDGEPPYFNEPPLKAMKMIRDNLPPRLKNLHKVSPSLKGFLDRLLVR 265
Query: 63 DPTQRPSGHQVRRLPMF 79
DP QR + ++ + P
Sbjct: 266 DPAQRATAAELLKHPFL 282
>pdb|3NAY|A Chain A, Pdk1 In Complex With Inhibitor Mp6
pdb|3NAY|B Chain B, Pdk1 In Complex With Inhibitor Mp6
Length = 311
Score = 41.2 bits (95), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 24/90 (26%), Positives = 41/90 (45%), Gaps = 9/90 (10%)
Query: 4 DWWALGVCIYEFVTGVLPFSDETPQKVFDNILANQLEWPEDEEALNPSTEETILALLKSD 63
D WALG IY+ V G+ PF +F I+ + ++PE P + + LL D
Sbjct: 213 DLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFPEK---FFPKARDLVEKLLVLD 269
Query: 64 PTQRPSGHQV------RRLPMFKDYDWDSI 87
T+R ++ + P F+ W+++
Sbjct: 270 ATKRLGCEEMEGYGPLKAHPFFESVTWENL 299
>pdb|2CDZ|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Cgp74514a
pdb|2J0I|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 303
Score = 41.2 bits (95), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 23/77 (29%), Positives = 38/77 (49%)
Query: 3 VDWWALGVCIYEFVTGVLPFSDETPQKVFDNILANQLEWPEDEEALNPSTEETILALLKS 62
VD W+LG+ + E V G P+ +E P K I N ++ ++PS + + LL
Sbjct: 208 VDIWSLGIMVIEMVDGEPPYFNEPPLKAMKMIRDNLPPRLKNLHKVSPSLKGFLDRLLVR 267
Query: 63 DPTQRPSGHQVRRLPMF 79
DP QR + ++ + P
Sbjct: 268 DPAQRATAAELLKHPFL 284
>pdb|3NUN|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Lead
Compound
Length = 292
Score = 41.2 bits (95), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 24/90 (26%), Positives = 41/90 (45%), Gaps = 9/90 (10%)
Query: 4 DWWALGVCIYEFVTGVLPFSDETPQKVFDNILANQLEWPEDEEALNPSTEETILALLKSD 63
D WALG IY+ V G+ PF +F I+ + ++PE P + + LL D
Sbjct: 198 DLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFPEK---FFPKARDLVEKLLVLD 254
Query: 64 PTQRPSGHQV------RRLPMFKDYDWDSI 87
T+R ++ + P F+ W+++
Sbjct: 255 ATKRLGCEEMEGYGPLKAHPFFESVTWENL 284
>pdb|3NAX|A Chain A, Pdk1 In Complex With Inhibitor Mp7
Length = 311
Score = 41.2 bits (95), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 24/90 (26%), Positives = 41/90 (45%), Gaps = 9/90 (10%)
Query: 4 DWWALGVCIYEFVTGVLPFSDETPQKVFDNILANQLEWPEDEEALNPSTEETILALLKSD 63
D WALG IY+ V G+ PF +F I+ + ++PE P + + LL D
Sbjct: 213 DLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFPEK---FFPKARDLVEKLLVLD 269
Query: 64 PTQRPSGHQV------RRLPMFKDYDWDSI 87
T+R ++ + P F+ W+++
Sbjct: 270 ATKRLGCEEMEGYGPLKAHPFFESVTWENL 299
>pdb|4FIE|A Chain A, Full-Length Human Pak4
pdb|4FIE|B Chain B, Full-Length Human Pak4
Length = 423
Score = 41.2 bits (95), Expect = 1e-04, Method: Composition-based stats.
Identities = 23/77 (29%), Positives = 38/77 (49%)
Query: 3 VDWWALGVCIYEFVTGVLPFSDETPQKVFDNILANQLEWPEDEEALNPSTEETILALLKS 62
VD W+LG+ + E V G P+ +E P K I N ++ ++PS + + LL
Sbjct: 328 VDIWSLGIMVIEMVDGEPPYFNEPPLKAMKMIRDNLPPRLKNLHKVSPSLKGFLDRLLVR 387
Query: 63 DPTQRPSGHQVRRLPMF 79
DP QR + ++ + P
Sbjct: 388 DPAQRATAAELLKHPFL 404
>pdb|3ORX|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|E Chain E, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|F Chain F, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|G Chain G, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|H Chain H, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORZ|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3OTU|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator Js30
Length = 316
Score = 41.2 bits (95), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 24/90 (26%), Positives = 41/90 (45%), Gaps = 9/90 (10%)
Query: 4 DWWALGVCIYEFVTGVLPFSDETPQKVFDNILANQLEWPEDEEALNPSTEETILALLKSD 63
D WALG IY+ V G+ PF +F I+ + ++PE P + + LL D
Sbjct: 221 DLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFPEK---FFPKARDLVEKLLVLD 277
Query: 64 PTQRPSGHQV------RRLPMFKDYDWDSI 87
T+R ++ + P F+ W+++
Sbjct: 278 ATKRLGCEEMEGYGPLKAHPFFESVTWENL 307
>pdb|4FIF|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIF|B Chain B, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIG|A Chain A, Catalytic Domain Of Human Pak4
pdb|4FIG|B Chain B, Catalytic Domain Of Human Pak4
pdb|4FIH|A Chain A, Catalytic Domain Of Human Pak4 With Qkftglprqw Peptide
pdb|4FII|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIJ|A Chain A, Catalytic Domain Of Human Pak4
Length = 346
Score = 41.2 bits (95), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 23/77 (29%), Positives = 38/77 (49%)
Query: 3 VDWWALGVCIYEFVTGVLPFSDETPQKVFDNILANQLEWPEDEEALNPSTEETILALLKS 62
VD W+LG+ + E V G P+ +E P K I N ++ ++PS + + LL
Sbjct: 251 VDIWSLGIMVIEMVDGEPPYFNEPPLKAMKMIRDNLPPRLKNLHKVSPSLKGFLDRLLVR 310
Query: 63 DPTQRPSGHQVRRLPMF 79
DP QR + ++ + P
Sbjct: 311 DPAQRATAAELLKHPFL 327
>pdb|3RWP|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 41.2 bits (95), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 24/90 (26%), Positives = 41/90 (45%), Gaps = 9/90 (10%)
Query: 4 DWWALGVCIYEFVTGVLPFSDETPQKVFDNILANQLEWPEDEEALNPSTEETILALLKSD 63
D WALG IY+ V G+ PF +F I+ + ++PE P + + LL D
Sbjct: 216 DLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFPEK---FFPKARDLVEKLLVLD 272
Query: 64 PTQRPSGHQV------RRLPMFKDYDWDSI 87
T+R ++ + P F+ W+++
Sbjct: 273 ATKRLGCEEMEGYGPLKAHPFFESVTWENL 302
>pdb|2XCH|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 41.2 bits (95), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 24/90 (26%), Positives = 41/90 (45%), Gaps = 9/90 (10%)
Query: 4 DWWALGVCIYEFVTGVLPFSDETPQKVFDNILANQLEWPEDEEALNPSTEETILALLKSD 63
D WALG IY+ V G+ PF +F I+ + ++PE P + + LL D
Sbjct: 214 DLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFPEK---FFPKARDLVEKLLVLD 270
Query: 64 PTQRPSGHQV------RRLPMFKDYDWDSI 87
T+R ++ + P F+ W+++
Sbjct: 271 ATKRLGCEEMEGYGPLKAHPFFESVTWENL 300
>pdb|2QR8|A Chain A, 2.0a X-ray Structure Of C-terminal Kinase Domain Of P90
Ribosomal S6 Kinase 2 (rsk2)
pdb|4D9U|A Chain A, Rsk2 C-Terminal Kinase Domain, (E)-Tert-Butyl
3-(4-Amino-7-(3-
Hydroxypropyl)-5-P-Tolyl-7h-Pyrrolo[2,
3-D]pyrimidin-6-Yl)-2- Cyanoacrylate
pdb|4D9T|A Chain A, Rsk2 C-Terminal Kinase Domain With Inhibitor (E)-Methyl
3-(4-Amino-7-
(3-Hydroxypropyl)-5-P-Tolyl-7h-Pyrrolo[2,
3-D]pyrimidin-6-Yl)-2- Cyanoacrylate
Length = 342
Score = 41.2 bits (95), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 22/81 (27%), Positives = 42/81 (51%), Gaps = 4/81 (4%)
Query: 1 SGVDWWALGVCIYEFVTGVLPFS---DETPQKVFDNILANQLEWPEDE-EALNPSTEETI 56
+ D W+LGV +Y +TG PF+ D+TP+++ I + + +++ + ++ +
Sbjct: 199 AACDIWSLGVLLYTMLTGYTPFANGPDDTPEEILARIGSGKFSLSGGYWNSVSDTAKDLV 258
Query: 57 LALLKSDPTQRPSGHQVRRLP 77
+L DP QR + V R P
Sbjct: 259 SKMLHVDPHQRLTAALVLRHP 279
>pdb|3H9O|A Chain A, Phosphoinositide-Dependent Protein Kinase 1 (Pdk-1) In
Complex With Compound 9
Length = 311
Score = 41.2 bits (95), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 24/90 (26%), Positives = 41/90 (45%), Gaps = 9/90 (10%)
Query: 4 DWWALGVCIYEFVTGVLPFSDETPQKVFDNILANQLEWPEDEEALNPSTEETILALLKSD 63
D WALG IY+ V G+ PF +F I+ + ++PE P + + LL D
Sbjct: 216 DLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFPEK---FFPKARDLVEKLLVLD 272
Query: 64 PTQRPSGHQV------RRLPMFKDYDWDSI 87
T+R ++ + P F+ W+++
Sbjct: 273 ATKRLGCEEMEGYGPLKAHPFFESVTWENL 302
>pdb|1UU3|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ly333531
pdb|1UU7|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-2
pdb|1UU8|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-1
pdb|1OKY|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Staurosporine
pdb|1OKZ|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ucn-01
Length = 310
Score = 41.2 bits (95), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 24/90 (26%), Positives = 41/90 (45%), Gaps = 9/90 (10%)
Query: 4 DWWALGVCIYEFVTGVLPFSDETPQKVFDNILANQLEWPEDEEALNPSTEETILALLKSD 63
D WALG IY+ V G+ PF +F I+ + ++PE P + + LL D
Sbjct: 214 DLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFPEK---FFPKARDLVEKLLVLD 270
Query: 64 PTQRPSGHQV------RRLPMFKDYDWDSI 87
T+R ++ + P F+ W+++
Sbjct: 271 ATKRLGCEEMEGYGPLKAHPFFESVTWENL 300
>pdb|3SC1|A Chain A, Novel Isoquinolone Pdk1 Inhibitors Discovered Through
Fragment-Based Lead Discovery
pdb|3RWQ|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 41.2 bits (95), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 24/90 (26%), Positives = 41/90 (45%), Gaps = 9/90 (10%)
Query: 4 DWWALGVCIYEFVTGVLPFSDETPQKVFDNILANQLEWPEDEEALNPSTEETILALLKSD 63
D WALG IY+ V G+ PF +F I+ + ++PE P + + LL D
Sbjct: 216 DLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFPEK---FFPKARDLVEKLLVLD 272
Query: 64 PTQRPSGHQV------RRLPMFKDYDWDSI 87
T+R ++ + P F+ W+++
Sbjct: 273 ATKRLGCEEMEGYGPLKAHPFFESVTWENL 302
>pdb|2XCK|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 41.2 bits (95), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 24/90 (26%), Positives = 41/90 (45%), Gaps = 9/90 (10%)
Query: 4 DWWALGVCIYEFVTGVLPFSDETPQKVFDNILANQLEWPEDEEALNPSTEETILALLKSD 63
D WALG IY+ V G+ PF +F I+ + ++PE P + + LL D
Sbjct: 214 DLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFPEK---FFPKARDLVEKLLVLD 270
Query: 64 PTQRPSGHQV------RRLPMFKDYDWDSI 87
T+R ++ + P F+ W+++
Sbjct: 271 ATKRLGCEEMEGYGPLKAHPFFESVTWENL 300
>pdb|2BIY|A Chain A, Structure Of Pdk1-S241a Mutant Kinase Domain
Length = 310
Score = 41.2 bits (95), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 24/90 (26%), Positives = 41/90 (45%), Gaps = 9/90 (10%)
Query: 4 DWWALGVCIYEFVTGVLPFSDETPQKVFDNILANQLEWPEDEEALNPSTEETILALLKSD 63
D WALG IY+ V G+ PF +F I+ + ++PE P + + LL D
Sbjct: 214 DLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFPEK---FFPKARDLVEKLLVLD 270
Query: 64 PTQRPSGHQV------RRLPMFKDYDWDSI 87
T+R ++ + P F+ W+++
Sbjct: 271 ATKRLGCEEMEGYGPLKAHPFFESVTWENL 300
>pdb|3PWY|A Chain A, Crystal Structure Of An Extender (Spd28345)-Modified Human
Pdk1 Complex 2
Length = 311
Score = 41.2 bits (95), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 24/90 (26%), Positives = 41/90 (45%), Gaps = 9/90 (10%)
Query: 4 DWWALGVCIYEFVTGVLPFSDETPQKVFDNILANQLEWPEDEEALNPSTEETILALLKSD 63
D WALG IY+ V G+ PF +F I+ + ++PE P + + LL D
Sbjct: 216 DLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFPEK---FFPKARDLVEKLLVLD 272
Query: 64 PTQRPSGHQV------RRLPMFKDYDWDSI 87
T+R ++ + P F+ W+++
Sbjct: 273 ATKRLGCEEMEGYGPLKAHPFFESVTWENL 302
>pdb|3IOP|A Chain A, Pdk-1 In Complex With The Inhibitor Compound-8i
pdb|3QCQ|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-(3-
Amino-1h-Indazol-6-Yl)-N4-Ethyl-2,4-Pyrimidinediamine
pdb|3QCS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-[2-
Amino-6-(4-Morpholinyl)-4-Pyrimidinyl]-1h-Indazol-3-
Amine
pdb|3QCX|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-{2-
Amino-6-[(3r)-3-Methyl-4-Morpholinyl]-4-Pyrimidinyl}-1h-
Indazol-3- Amine
pdb|3QCY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 4-[2-
Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-N-
Phenyl-2- Morpholinecarboxamide
pdb|3QD0|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With (2r,5s)-
1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-6-
Methyl-N- Phenyl-3-Piperidinecarboxamide
pdb|3QD3|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1- Dimethylethyl
{(3r,6s)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-6-Methyl-3-Piperidinyl}carbamate
pdb|3QD4|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1-
Dimethylethyl{(3r,
5r)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-5-Methyl-3-Piperidinyl}carbamate
Length = 312
Score = 41.2 bits (95), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 24/90 (26%), Positives = 41/90 (45%), Gaps = 9/90 (10%)
Query: 4 DWWALGVCIYEFVTGVLPFSDETPQKVFDNILANQLEWPEDEEALNPSTEETILALLKSD 63
D WALG IY+ V G+ PF +F I+ + ++PE P + + LL D
Sbjct: 217 DLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFPEK---FFPKARDLVEKLLVLD 273
Query: 64 PTQRPSGHQV------RRLPMFKDYDWDSI 87
T+R ++ + P F+ W+++
Sbjct: 274 ATKRLGCEEMEGYGPLKAHPFFESVTWENL 303
>pdb|1Z5M|A Chain A, Crystal Structure Of
N1-[3-[[5-bromo-2-[[3-[(1-pyrrolidinylcarbonyl)
Amino]phenyl]amino]-4-pyrimidinyl]amino]propyl]-2,2-
Dimethylpropanediamide Complexed With Human Pdk1
pdb|2PE0|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
5-Hydroxy-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-1,
3-Dihydro- Indol-2-One Complex
pdb|2PE1|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
{2-Oxo-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-2,
3-Dihydro-1h- Indol-5-Yl}-Urea {bx-517} Complex
pdb|2PE2|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
3-{5-[2-Oxo-5-Ureido-1,
2-Dihydro-Indol-(3z)-Ylidenemethyl]-1h-
Pyrrol-3-Yl}-N-(2-Piperidin-1-Yl-Ethyl)-Benzamide
Complex
Length = 286
Score = 41.2 bits (95), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 24/90 (26%), Positives = 41/90 (45%), Gaps = 9/90 (10%)
Query: 4 DWWALGVCIYEFVTGVLPFSDETPQKVFDNILANQLEWPEDEEALNPSTEETILALLKSD 63
D WALG IY+ V G+ PF +F I+ + ++PE P + + LL D
Sbjct: 191 DLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFPEK---FFPKARDLVEKLLVLD 247
Query: 64 PTQRPSGHQV------RRLPMFKDYDWDSI 87
T+R ++ + P F+ W+++
Sbjct: 248 ATKRLGCEEMEGYGPLKAHPFFESVTWENL 277
>pdb|3NUS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment8
pdb|3NUU|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment11
pdb|3NUY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment17
Length = 286
Score = 41.2 bits (95), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 24/90 (26%), Positives = 41/90 (45%), Gaps = 9/90 (10%)
Query: 4 DWWALGVCIYEFVTGVLPFSDETPQKVFDNILANQLEWPEDEEALNPSTEETILALLKSD 63
D WALG IY+ V G+ PF +F I+ + ++PE P + + LL D
Sbjct: 192 DLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFPEK---FFPKARDLVEKLLVLD 248
Query: 64 PTQRPSGHQV------RRLPMFKDYDWDSI 87
T+R ++ + P F+ W+++
Sbjct: 249 ATKRLGCEEMEGYGPLKAHPFFESVTWENL 278
>pdb|2R7B|A Chain A, Crystal Structure Of The Phosphoinositide-Dependent
Kinase- 1 (Pdk-1)catalytic Domain Bound To A
Dibenzonaphthyridine Inhibitor
pdb|3ION|A Chain A, Pdk1 In Complex With Compound 8h
Length = 312
Score = 41.2 bits (95), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 24/90 (26%), Positives = 41/90 (45%), Gaps = 9/90 (10%)
Query: 4 DWWALGVCIYEFVTGVLPFSDETPQKVFDNILANQLEWPEDEEALNPSTEETILALLKSD 63
D WALG IY+ V G+ PF +F I+ + ++PE P + + LL D
Sbjct: 217 DLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFPEK---FFPKARDLVEKLLVLD 273
Query: 64 PTQRPSGHQV------RRLPMFKDYDWDSI 87
T+R ++ + P F+ W+++
Sbjct: 274 ATKRLGCEEMEGYGPLKAHPFFESVTWENL 303
>pdb|3T8O|A Chain A, Rhodopsin Kinase (grk1) L166k Mutant At 2.5a Resolution
Length = 543
Score = 40.8 bits (94), Expect = 2e-04, Method: Composition-based stats.
Identities = 25/91 (27%), Positives = 46/91 (50%), Gaps = 12/91 (13%)
Query: 3 VDWWALGVCIYEFVTGVLPFSDETP----QKVFDNILANQLEWPEDEEALNPSTEETILA 58
VD++ALGV +YE + PF +++ +L + +P+ +P++++ A
Sbjct: 370 VDYFALGVTLYEMIAARGPFRARGEKVENKELKQRVLEQAVTYPDK---FSPASKDFCEA 426
Query: 59 LLKSDPTQR-----PSGHQVRRLPMFKDYDW 84
LL+ DP +R S +R P+F+D W
Sbjct: 427 LLQKDPEKRLGFRDGSCDGLRTHPLFRDISW 457
>pdb|3QC9|A Chain A, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|B Chain B, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|C Chain C, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|D Chain D, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
Length = 543
Score = 40.8 bits (94), Expect = 2e-04, Method: Composition-based stats.
Identities = 25/91 (27%), Positives = 46/91 (50%), Gaps = 12/91 (13%)
Query: 3 VDWWALGVCIYEFVTGVLPFSDETP----QKVFDNILANQLEWPEDEEALNPSTEETILA 58
VD++ALGV +YE + PF +++ +L + +P+ +P++++ A
Sbjct: 370 VDYFALGVTLYEMIAARGPFRARGEKVENKELKQRVLEQAVTYPDK---FSPASKDFCEA 426
Query: 59 LLKSDPTQR-----PSGHQVRRLPMFKDYDW 84
LL+ DP +R S +R P+F+D W
Sbjct: 427 LLQKDPEKRLGFRDGSCDGLRTHPLFRDISW 457
>pdb|1UU9|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-3
Length = 286
Score = 40.8 bits (94), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 24/90 (26%), Positives = 41/90 (45%), Gaps = 9/90 (10%)
Query: 4 DWWALGVCIYEFVTGVLPFSDETPQKVFDNILANQLEWPEDEEALNPSTEETILALLKSD 63
D WALG IY+ V G+ PF +F I+ + ++PE P + + LL D
Sbjct: 193 DLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFPEK---FFPKARDLVEKLLVLD 249
Query: 64 PTQRPSGHQV------RRLPMFKDYDWDSI 87
T+R ++ + P F+ W+++
Sbjct: 250 ATKRLGCEEMEGYGPLKAHPFFESVTWENL 279
>pdb|3C4X|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4X|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4Y|A Chain A, Crystal Structure Of Apo Form Of G Protein Coupled
Receptor Kinase 1 At 7.51a
pdb|3C4Y|B Chain B, Crystal Structure Of Apo Form Of G Protein Coupled
Receptor Kinase 1 At 7.51a
pdb|3C4Z|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 1.84a
pdb|3C50|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C50|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C51|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
pdb|3C51|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
Length = 543
Score = 40.8 bits (94), Expect = 2e-04, Method: Composition-based stats.
Identities = 25/91 (27%), Positives = 46/91 (50%), Gaps = 12/91 (13%)
Query: 3 VDWWALGVCIYEFVTGVLPFSDETP----QKVFDNILANQLEWPEDEEALNPSTEETILA 58
VD++ALGV +YE + PF +++ +L + +P+ +P++++ A
Sbjct: 370 VDYFALGVTLYEMIAARGPFRARGEKVENKELKQRVLEQAVTYPDK---FSPASKDFCEA 426
Query: 59 LLKSDPTQR-----PSGHQVRRLPMFKDYDW 84
LL+ DP +R S +R P+F+D W
Sbjct: 427 LLQKDPEKRLGFRDGSCDGLRTHPLFRDISW 457
>pdb|3C4W|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
pdb|3C4W|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
Length = 543
Score = 40.8 bits (94), Expect = 2e-04, Method: Composition-based stats.
Identities = 25/91 (27%), Positives = 46/91 (50%), Gaps = 12/91 (13%)
Query: 3 VDWWALGVCIYEFVTGVLPFSDETP----QKVFDNILANQLEWPEDEEALNPSTEETILA 58
VD++ALGV +YE + PF +++ +L + +P+ +P++++ A
Sbjct: 370 VDYFALGVTLYEMIAARGPFRARGEKVENKELKQRVLEQAVTYPDK---FSPASKDFCEA 426
Query: 59 LLKSDPTQR-----PSGHQVRRLPMFKDYDW 84
LL+ DP +R S +R P+F+D W
Sbjct: 427 LLQKDPEKRLGFRDGSCDGLRTHPLFRDISW 457
>pdb|3HRC|A Chain A, Crystal Structure Of A Mutant Of Human Pdk1 Kinase Domain
In Complex With Atp
pdb|3HRF|A Chain A, Crystal Structure Of Human Pdk1 Kinase Domain In Complex
With An Allosteric Activator Bound To The Pif-Pocket
pdb|3RCJ|A Chain A, Rapid Preparation Of Triazolyl Substituted Nh-Heterocyclic
Kinase Inhibitors Via One-Pot Sonogashira Coupling
Tms-Deprotection Cuaac Sequence
pdb|4A06|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps114 Bound To The Pif-Pocket
pdb|4AW1|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps210 Bound To The Pif-Pocket
Length = 311
Score = 40.8 bits (94), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 24/90 (26%), Positives = 41/90 (45%), Gaps = 9/90 (10%)
Query: 4 DWWALGVCIYEFVTGVLPFSDETPQKVFDNILANQLEWPEDEEALNPSTEETILALLKSD 63
D WALG IY+ V G+ PF +F I+ + ++PE P + + LL D
Sbjct: 216 DLWALGCIIYQLVAGLPPFRAGNEGLIFAKIIKLEYDFPEK---FFPKARDLVEKLLVLD 272
Query: 64 PTQRPSGHQV------RRLPMFKDYDWDSI 87
T+R ++ + P F+ W+++
Sbjct: 273 ATKRLGCEEMEGYGPLKAHPFFESVTWENL 302
>pdb|1H1W|A Chain A, High Resolution Crystal Structure Of The Human Pdk1
Catalytic Domain
pdb|1UVR|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-8
Length = 289
Score = 40.8 bits (94), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 24/90 (26%), Positives = 41/90 (45%), Gaps = 9/90 (10%)
Query: 4 DWWALGVCIYEFVTGVLPFSDETPQKVFDNILANQLEWPEDEEALNPSTEETILALLKSD 63
D WALG IY+ V G+ PF +F I+ + ++PE P + + LL D
Sbjct: 194 DLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFPEK---FFPKARDLVEKLLVLD 250
Query: 64 PTQRPSGHQV------RRLPMFKDYDWDSI 87
T+R ++ + P F+ W+++
Sbjct: 251 ATKRLGCEEMEGYGPLKAHPFFESVTWENL 280
>pdb|3QC4|A Chain A, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
pdb|3QC4|B Chain B, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
Length = 314
Score = 40.8 bits (94), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 24/90 (26%), Positives = 41/90 (45%), Gaps = 9/90 (10%)
Query: 4 DWWALGVCIYEFVTGVLPFSDETPQKVFDNILANQLEWPEDEEALNPSTEETILALLKSD 63
D WALG IY+ V G+ PF +F I+ + ++P A P + + LL D
Sbjct: 219 DLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFP---AAFFPKARDLVEKLLVLD 275
Query: 64 PTQRPSGHQV------RRLPMFKDYDWDSI 87
T+R ++ + P F+ W+++
Sbjct: 276 ATKRLGCEEMEGYGPLKAHPFFESVTWENL 305
>pdb|3BHY|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase
3 (Dapk3) In Complex With A Beta-Carboline Ligand
pdb|3BQR|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase
3 (Dapk3) In Complex With An Imidazo-Pyridazine Ligand
Length = 283
Score = 40.8 bits (94), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 24/68 (35%), Positives = 36/68 (52%), Gaps = 5/68 (7%)
Query: 3 VDWWALGVCIYEFVTGVLPFSDETPQKVFDNILANQLEWPEDEEALNPSTE---ETILAL 59
D W++GV Y ++G PF ET Q+ NI A ++ DEE + ++E + I L
Sbjct: 192 ADMWSIGVITYILLSGASPFLGETKQETLTNISAVNYDF--DEEYFSNTSELAKDFIRRL 249
Query: 60 LKSDPTQR 67
L DP +R
Sbjct: 250 LVKDPKRR 257
>pdb|2J90|A Chain A, Crystal Structure Of Human Zip Kinase In Complex With A
Tetracyclic Pyridone Inhibitor (pyridone 6)
pdb|2J90|B Chain B, Crystal Structure Of Human Zip Kinase In Complex With A
Tetracyclic Pyridone Inhibitor (pyridone 6)
Length = 304
Score = 40.4 bits (93), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 24/68 (35%), Positives = 36/68 (52%), Gaps = 5/68 (7%)
Query: 3 VDWWALGVCIYEFVTGVLPFSDETPQKVFDNILANQLEWPEDEEALNPSTE---ETILAL 59
D W++GV Y ++G PF ET Q+ NI A ++ DEE + ++E + I L
Sbjct: 213 ADMWSIGVITYILLSGASPFLGETKQETLTNISAVNYDF--DEEYFSNTSELAKDFIRRL 270
Query: 60 LKSDPTQR 67
L DP +R
Sbjct: 271 LVKDPKRR 278
>pdb|4A07|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps171 Bound To The Pif-Pocket
pdb|4AW0|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps182 Bound To The Pif-Pocket
Length = 311
Score = 40.4 bits (93), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 24/90 (26%), Positives = 41/90 (45%), Gaps = 9/90 (10%)
Query: 4 DWWALGVCIYEFVTGVLPFSDETPQKVFDNILANQLEWPEDEEALNPSTEETILALLKSD 63
D WALG IY+ V G+ PF +F I+ + ++PE P + + LL D
Sbjct: 216 DLWALGCIIYQLVAGLPPFRAGNEGLIFAKIIKLEYDFPEK---FFPKARDLVEKLLVLD 272
Query: 64 PTQRPSGHQV------RRLPMFKDYDWDSI 87
T+R ++ + P F+ W+++
Sbjct: 273 ATKRLGCEEMEGYGPLKAHPFFESVTWENL 302
>pdb|2WNT|A Chain A, Crystal Structure Of The Human Ribosomal Protein S6 Kinase
pdb|2WNT|B Chain B, Crystal Structure Of The Human Ribosomal Protein S6 Kinase
Length = 330
Score = 40.4 bits (93), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 20/80 (25%), Positives = 41/80 (51%), Gaps = 4/80 (5%)
Query: 2 GVDWWALGVCIYEFVTGVLPFSD---ETPQKVFDNILANQLEWPEDE-EALNPSTEETIL 57
G D W+LG+ +Y + G PF++ +TP+++ I + + ++ + ++ +
Sbjct: 205 GCDIWSLGILLYTMLAGYTPFANGPSDTPEEILTRIGSGKFTLSGGNWNTVSETAKDLVS 264
Query: 58 ALLKSDPTQRPSGHQVRRLP 77
+L DP QR + QV + P
Sbjct: 265 KMLHVDPHQRLTAKQVLQHP 284
>pdb|3TKU|A Chain A, Mrck Beta In Complex With Fasudil
pdb|3TKU|B Chain B, Mrck Beta In Complex With Fasudil
Length = 433
Score = 40.4 bits (93), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 23/90 (25%), Positives = 46/90 (51%), Gaps = 8/90 (8%)
Query: 4 DWWALGVCIYEFVTGVLPFSDETPQKVFDNILANQ--LEWPEDEEALNPSTEETILALLK 61
DWW+LGVC+YE + G PF E+ + + I+ ++ ++P ++ ++ I L+
Sbjct: 279 DWWSLGVCMYEMLYGETPFYAESLVETYGKIMNHEERFQFPSHVTDVSEEAKDLIQRLIC 338
Query: 62 SDPTQRPSGHQ----VRRLPMFKDYDWDSI 87
S +R G ++ F+ +W++I
Sbjct: 339 S--RERRLGQNGIEDFKKHAFFEGLNWENI 366
>pdb|1YRP|A Chain A, Catalytic Domain Of Human Zip Kinase Phosphorylated At
Thr265
pdb|1YRP|B Chain B, Catalytic Domain Of Human Zip Kinase Phosphorylated At
Thr265
Length = 278
Score = 40.4 bits (93), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 24/68 (35%), Positives = 36/68 (52%), Gaps = 5/68 (7%)
Query: 3 VDWWALGVCIYEFVTGVLPFSDETPQKVFDNILANQLEWPEDEEALNPSTE---ETILAL 59
D W++GV Y ++G PF ET Q+ NI A ++ DEE + ++E + I L
Sbjct: 199 ADMWSIGVITYILLSGASPFLGETKQETLTNISAVNYDF--DEEYFSNTSELAKDFIRRL 256
Query: 60 LKSDPTQR 67
L DP +R
Sbjct: 257 LVKDPKRR 264
>pdb|3RNY|A Chain A, Crystal Structure Of Human Rsk1 C-Terminal Kinase Domain
pdb|3RNY|B Chain B, Crystal Structure Of Human Rsk1 C-Terminal Kinase Domain
Length = 346
Score = 40.4 bits (93), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 20/80 (25%), Positives = 41/80 (51%), Gaps = 4/80 (5%)
Query: 2 GVDWWALGVCIYEFVTGVLPFSD---ETPQKVFDNILANQLEWPEDE-EALNPSTEETIL 57
G D W+LG+ +Y + G PF++ +TP+++ I + + ++ + ++ +
Sbjct: 205 GCDIWSLGILLYTMLAGYTPFANGPSDTPEEILTRIGSGKFTLSGGNWNTVSETAKDLVS 264
Query: 58 ALLKSDPTQRPSGHQVRRLP 77
+L DP QR + QV + P
Sbjct: 265 KMLHVDPHQRLTAKQVLQHP 284
>pdb|3QFV|A Chain A, Mrck Beta In Complex With Tpca-1
pdb|3QFV|B Chain B, Mrck Beta In Complex With Tpca-1
Length = 415
Score = 40.4 bits (93), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 23/90 (25%), Positives = 46/90 (51%), Gaps = 8/90 (8%)
Query: 4 DWWALGVCIYEFVTGVLPFSDETPQKVFDNILANQ--LEWPEDEEALNPSTEETILALLK 61
DWW+LGVC+YE + G PF E+ + + I+ ++ ++P ++ ++ I L+
Sbjct: 263 DWWSLGVCMYEMLYGETPFYAESLVETYGKIMNHEERFQFPSHVTDVSEEAKDLIQRLIC 322
Query: 62 SDPTQRPSGHQ----VRRLPMFKDYDWDSI 87
S +R G ++ F+ +W++I
Sbjct: 323 S--RERRLGQNGIEDFKKHAFFEGLNWENI 350
>pdb|2ZV2|A Chain A, Crystal Structure Of Human CalciumCALMODULIN-Dependent
Protein Kinase Kinase 2, Beta, Camkk2 Kinase Domain In
Complex With Sto-609
Length = 298
Score = 40.4 bits (93), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 22/67 (32%), Positives = 34/67 (50%), Gaps = 1/67 (1%)
Query: 1 SGVDWWALGVCIYEFVTGVLPFSDETPQKVFDNILANQLEWPEDEEALNPSTEETILALL 60
+D WA+GV +Y FV G PF DE + I + LE+P D+ + ++ I +L
Sbjct: 219 KALDVWAMGVTLYCFVFGQCPFMDERIMCLHSKIKSQALEFP-DQPDIAEDLKDLITRML 277
Query: 61 KSDPTQR 67
+P R
Sbjct: 278 DKNPESR 284
>pdb|2V55|A Chain A, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe
Complex Structure
pdb|2V55|C Chain C, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe
Complex Structure
Length = 406
Score = 40.0 bits (92), Expect = 3e-04, Method: Composition-based stats.
Identities = 23/85 (27%), Positives = 42/85 (49%), Gaps = 5/85 (5%)
Query: 4 DWWALGVCIYEFVTGVLPFSDETPQKVFDNIL--ANQLEWPEDEEALNPSTEETILALLK 61
DWW++GV +YE + G PF ++ + I+ N L +P+D + ++ + I A L
Sbjct: 260 DWWSVGVFLYEMLVGDTPFYADSLVGTYSKIMNHKNSLTFPDDND-ISKEAKNLICAFLT 318
Query: 62 SDPTQ--RPSGHQVRRLPMFKDYDW 84
+ R +++R FK+ W
Sbjct: 319 DREVRLGRNGVEEIKRHLFFKNDQW 343
>pdb|2ESM|A Chain A, Crystal Structure Of Rock 1 Bound To Fasudil
pdb|2ESM|B Chain B, Crystal Structure Of Rock 1 Bound To Fasudil
pdb|2ETK|A Chain A, Crystal Structure Of Rock 1 Bound To Hydroxyfasudil
pdb|2ETK|B Chain B, Crystal Structure Of Rock 1 Bound To Hydroxyfasudil
pdb|2ETR|A Chain A, Crystal Structure Of Rock I Bound To Y-27632
pdb|2ETR|B Chain B, Crystal Structure Of Rock I Bound To Y-27632
pdb|3D9V|A Chain A, Crystal Structure Of Rock I Bound To H-1152p A Di-
Methylated Variant Of Fasudil
pdb|3D9V|B Chain B, Crystal Structure Of Rock I Bound To H-1152p A Di-
Methylated Variant Of Fasudil
pdb|3NCZ|A Chain A, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|B Chain B, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|C Chain C, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|D Chain D, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NDM|A Chain A, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|B Chain B, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|C Chain C, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|D Chain D, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
Length = 415
Score = 40.0 bits (92), Expect = 3e-04, Method: Composition-based stats.
Identities = 23/85 (27%), Positives = 42/85 (49%), Gaps = 5/85 (5%)
Query: 4 DWWALGVCIYEFVTGVLPFSDETPQKVFDNIL--ANQLEWPEDEEALNPSTEETILALLK 61
DWW++GV +YE + G PF ++ + I+ N L +P+D + ++ + I A L
Sbjct: 260 DWWSVGVFLYEMLVGDTPFYADSLVGTYSKIMNHKNSLTFPDDND-ISKEAKNLICAFLT 318
Query: 62 SDPTQ--RPSGHQVRRLPMFKDYDW 84
+ R +++R FK+ W
Sbjct: 319 DREVRLGRNGVEEIKRHLFFKNDQW 343
>pdb|4FR4|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|C Chain C, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|D Chain D, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|E Chain E, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|F Chain F, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
Length = 384
Score = 40.0 bits (92), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 25/91 (27%), Positives = 42/91 (46%), Gaps = 7/91 (7%)
Query: 2 GVDWWALGVCIYEFVTGVLPF---SDETPQKVFDNILANQLEWPEDEEALNPSTEETILA 58
VDWW+LGV YE + G P+ S + +++ + +P A + +
Sbjct: 197 AVDWWSLGVTAYELLRGRRPYHIRSSTSSKEIVHTFETTVVTYP---SAWSQEMVSLLKK 253
Query: 59 LLKSDPTQRPSG-HQVRRLPMFKDYDWDSIL 88
LL+ +P QR S V+ P D +WD++
Sbjct: 254 LLEPNPDQRFSQLSDVQNFPYMNDINWDAVF 284
>pdb|2JAM|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
pdb|2JAM|B Chain B, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
Length = 304
Score = 40.0 bits (92), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 22/67 (32%), Positives = 36/67 (53%), Gaps = 1/67 (1%)
Query: 2 GVDWWALGVCIYEFVTGVLPFSDETPQKVFDNILANQLEWPEDE-EALNPSTEETILALL 60
VD W++GV Y + G PF +ET K+F+ I E+ + ++ S ++ I LL
Sbjct: 187 AVDCWSIGVITYILLCGYPPFYEETESKLFEKIKEGYYEFESPFWDDISESAKDFICHLL 246
Query: 61 KSDPTQR 67
+ DP +R
Sbjct: 247 EKDPNER 253
>pdb|3V8S|A Chain A, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|B Chain B, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|C Chain C, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|D Chain D, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3TV7|A Chain A, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|B Chain B, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|C Chain C, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|D Chain D, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TWJ|A Chain A, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|B Chain B, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|C Chain C, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|D Chain D, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
Length = 410
Score = 40.0 bits (92), Expect = 3e-04, Method: Composition-based stats.
Identities = 23/85 (27%), Positives = 42/85 (49%), Gaps = 5/85 (5%)
Query: 4 DWWALGVCIYEFVTGVLPFSDETPQKVFDNIL--ANQLEWPEDEEALNPSTEETILALLK 61
DWW++GV +YE + G PF ++ + I+ N L +P+D + ++ + I A L
Sbjct: 255 DWWSVGVFLYEMLVGDTPFYADSLVGTYSKIMNHKNSLTFPDDND-ISKEAKNLICAFLT 313
Query: 62 SDPTQ--RPSGHQVRRLPMFKDYDW 84
+ R +++R FK+ W
Sbjct: 314 DREVRLGRNGVEEIKRHLFFKNDQW 338
>pdb|2XUU|A Chain A, Crystal Structure Of A Dap-Kinase 1 Mutant
Length = 334
Score = 39.7 bits (91), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 24/67 (35%), Positives = 35/67 (52%), Gaps = 3/67 (4%)
Query: 3 VDWWALGVCIYEFVTGVLPFSDETPQKVFDNILANQLEWPEDEEALNPS--TEETILALL 60
D W++GV Y ++G PF +T Q+ N+ A E+ EDE N S ++ I LL
Sbjct: 198 ADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYEF-EDEYFSNTSALAKDFIRRLL 256
Query: 61 KSDPTQR 67
DP +R
Sbjct: 257 VKDPKKR 263
>pdb|3C0G|A Chain A, Cask Cam-kinase Domain- 3'-amp Complex, P1 Form
pdb|3C0G|B Chain B, Cask Cam-kinase Domain- 3'-amp Complex, P1 Form
pdb|3C0H|A Chain A, Cask Cam-Kinase Domain- Amppnp Complex, P1 Form
pdb|3C0H|B Chain B, Cask Cam-Kinase Domain- Amppnp Complex, P1 Form
pdb|3C0I|A Chain A, Cask Cam-Kinase Domain- 3'-Amp Complex, P212121 Form
Length = 351
Score = 39.7 bits (91), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 21/82 (25%), Positives = 43/82 (52%), Gaps = 2/82 (2%)
Query: 3 VDWWALGVCIYEFVTGVLPFSDETPQKVFDNILANQLEW-PEDEEALNPSTEETILALLK 61
VD W GV ++ ++G LPF T +++F+ I+ + + P ++ S ++ + +L
Sbjct: 214 VDVWGCGVILFILLSGCLPFYG-TKERLFEGIIKGKYKMNPRQWSHISESAKDLVRRMLM 272
Query: 62 SDPTQRPSGHQVRRLPMFKDYD 83
DP +R + ++ P K+ D
Sbjct: 273 LDPAERITVYEALNHPWLKERD 294
>pdb|2X0G|A Chain A, X-ray Structure Of A Dap-kinase Calmodulin Complex
Length = 334
Score = 39.7 bits (91), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 24/67 (35%), Positives = 35/67 (52%), Gaps = 3/67 (4%)
Query: 3 VDWWALGVCIYEFVTGVLPFSDETPQKVFDNILANQLEWPEDEEALNPS--TEETILALL 60
D W++GV Y ++G PF +T Q+ N+ A E+ EDE N S ++ I LL
Sbjct: 198 ADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYEF-EDEYFSNTSALAKDFIRRLL 256
Query: 61 KSDPTQR 67
DP +R
Sbjct: 257 VKDPKKR 263
>pdb|3TAC|A Chain A, Crystal Structure Of The Liprin-AlphaCASK COMPLEX
Length = 361
Score = 39.7 bits (91), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 21/82 (25%), Positives = 43/82 (52%), Gaps = 2/82 (2%)
Query: 3 VDWWALGVCIYEFVTGVLPFSDETPQKVFDNILANQLEW-PEDEEALNPSTEETILALLK 61
VD W GV ++ ++G LPF T +++F+ I+ + + P ++ S ++ + +L
Sbjct: 216 VDVWGCGVILFILLSGCLPFYG-TKERLFEGIIKGKYKMNPRQWSHISESAKDLVRRMLM 274
Query: 62 SDPTQRPSGHQVRRLPMFKDYD 83
DP +R + ++ P K+ D
Sbjct: 275 LDPAERITVYEALNHPWLKERD 296
>pdb|3MFR|A Chain A, Cask-4m Cam Kinase Domain, Native
pdb|3MFS|A Chain A, Cask-4m Cam Kinase Domain, Amppnp
pdb|3MFT|A Chain A, Cask-4m Cam Kinase Domain, Mn2+
pdb|3MFU|A Chain A, Cask-4m Cam Kinase Domain, Amppnp-Mn2+
Length = 351
Score = 39.3 bits (90), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 21/82 (25%), Positives = 43/82 (52%), Gaps = 2/82 (2%)
Query: 3 VDWWALGVCIYEFVTGVLPFSDETPQKVFDNILANQLEW-PEDEEALNPSTEETILALLK 61
VD W GV ++ ++G LPF T +++F+ I+ + + P ++ S ++ + +L
Sbjct: 214 VDVWGCGVILFILLSGCLPFYG-TKERLFEGIIKGKYKMNPRQWSHISESAKDLVRRMLM 272
Query: 62 SDPTQRPSGHQVRRLPMFKDYD 83
DP +R + ++ P K+ D
Sbjct: 273 LDPAERITVYEALNHPWLKERD 294
>pdb|2W4K|A Chain A, X-Ray Structure Of A Dap-Kinase 2-302
Length = 302
Score = 39.3 bits (90), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 24/67 (35%), Positives = 35/67 (52%), Gaps = 3/67 (4%)
Query: 3 VDWWALGVCIYEFVTGVLPFSDETPQKVFDNILANQLEWPEDEEALNPS--TEETILALL 60
D W++GV Y ++G PF +T Q+ N+ A E+ EDE N S ++ I LL
Sbjct: 198 ADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYEF-EDEYFSNTSALAKDFIRRLL 256
Query: 61 KSDPTQR 67
DP +R
Sbjct: 257 VKDPKKR 263
>pdb|1WVW|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
pdb|1WVX|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
pdb|1WVY|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
Length = 278
Score = 39.3 bits (90), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 24/66 (36%), Positives = 35/66 (53%), Gaps = 3/66 (4%)
Query: 4 DWWALGVCIYEFVTGVLPFSDETPQKVFDNILANQLEWPEDEEALNPS--TEETILALLK 61
D W++GV Y ++G PF +T Q+ N+ A E+ EDE N S ++ I LL
Sbjct: 199 DMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYEF-EDEYFSNTSALAKDFIRRLLV 257
Query: 62 SDPTQR 67
DP +R
Sbjct: 258 KDPKKR 263
>pdb|2YAK|A Chain A, Structure Of Death-Associated Protein Kinase 1 (Dapk1) In
Complex With A Ruthenium Octasporine Ligand (Osv)
pdb|2Y4P|A Chain A, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|B Chain B, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|C Chain C, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|D Chain D, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|3ZXT|A Chain A, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|B Chain B, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|C Chain C, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|D Chain D, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
Length = 285
Score = 39.3 bits (90), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 24/66 (36%), Positives = 35/66 (53%), Gaps = 3/66 (4%)
Query: 4 DWWALGVCIYEFVTGVLPFSDETPQKVFDNILANQLEWPEDEEALNPS--TEETILALLK 61
D W++GV Y ++G PF +T Q+ N+ A E+ EDE N S ++ I LL
Sbjct: 199 DMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYEF-EDEYFSNTSALAKDFIRRLLV 257
Query: 62 SDPTQR 67
DP +R
Sbjct: 258 KDPKKR 263
>pdb|2PML|X Chain X, Crystal Structure Of Pfpk7 In Complex With An Atp Analogue
pdb|2PMN|X Chain X, Crystal Structure Of Pfpk7 In Complex With An Atp-Site
Inhibitor
pdb|2PMO|X Chain X, Crystal Structure Of Pfpk7 In Complex With Hymenialdisine
Length = 348
Score = 39.3 bits (90), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 17/46 (36%), Positives = 28/46 (60%), Gaps = 1/46 (2%)
Query: 1 SGVDWWALGVCIYEFVTGVLPFSDETPQ-KVFDNILANQLEWPEDE 45
+ VD W+LG+C+Y V+PFS + ++F+NI +E+P D
Sbjct: 231 AKVDIWSLGICLYVMFYNVVPFSLKISLVELFNNIRTKNIEYPLDR 276
>pdb|2Y0A|A Chain A, Structure Of Dapk1 Construct Residues 1-304
Length = 326
Score = 39.3 bits (90), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 24/67 (35%), Positives = 35/67 (52%), Gaps = 3/67 (4%)
Query: 3 VDWWALGVCIYEFVTGVLPFSDETPQKVFDNILANQLEWPEDEEALNPS--TEETILALL 60
D W++GV Y ++G PF +T Q+ N+ A E+ EDE N S ++ I LL
Sbjct: 198 ADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYEF-EDEYFSNTSALAKDFIRRLL 256
Query: 61 KSDPTQR 67
DP +R
Sbjct: 257 VKDPKKR 263
>pdb|2W4J|A Chain A, X-Ray Structure Of A Dap-Kinase 2-277
Length = 277
Score = 39.3 bits (90), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 24/66 (36%), Positives = 35/66 (53%), Gaps = 3/66 (4%)
Query: 4 DWWALGVCIYEFVTGVLPFSDETPQKVFDNILANQLEWPEDEEALNPS--TEETILALLK 61
D W++GV Y ++G PF +T Q+ N+ A E+ EDE N S ++ I LL
Sbjct: 199 DMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYEF-EDEYFSNTSALAKDFIRRLLV 257
Query: 62 SDPTQR 67
DP +R
Sbjct: 258 KDPKKR 263
>pdb|3GU8|A Chain A, Crystal Structure Of Dapkl93g With N6-Cyclopentyladenosine
pdb|3GUB|A Chain A, Crystal Structure Of Dapkl93g Complexed With N6-(2-
Phenylethyl)adenosine
Length = 295
Score = 39.3 bits (90), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 24/67 (35%), Positives = 35/67 (52%), Gaps = 3/67 (4%)
Query: 3 VDWWALGVCIYEFVTGVLPFSDETPQKVFDNILANQLEWPEDEEALNPS--TEETILALL 60
D W++GV Y ++G PF +T Q+ N+ A E+ EDE N S ++ I LL
Sbjct: 198 ADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYEF-EDEYFSNTSALAKDFIRRLL 256
Query: 61 KSDPTQR 67
DP +R
Sbjct: 257 VKDPKKR 263
>pdb|2XZS|A Chain A, Death Associated Protein Kinase 1 Residues 1-312
pdb|2XZS|B Chain B, Death Associated Protein Kinase 1 Residues 1-312
Length = 312
Score = 39.3 bits (90), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 24/66 (36%), Positives = 35/66 (53%), Gaps = 3/66 (4%)
Query: 4 DWWALGVCIYEFVTGVLPFSDETPQKVFDNILANQLEWPEDEEALNPS--TEETILALLK 61
D W++GV Y ++G PF +T Q+ N+ A E+ EDE N S ++ I LL
Sbjct: 199 DMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYEF-EDEYFSNTSALAKDFIRRLLV 257
Query: 62 SDPTQR 67
DP +R
Sbjct: 258 KDPKKR 263
>pdb|3DFC|B Chain B, Crystal Structure Of A Glycine-Rich Loop Mutant Of The
Death Associated Protein Kinase Catalytic Domain With
Amppnp
pdb|3DGK|A Chain A, Crystal Structure Of A Glycine-Rich Loop Mutant Of The
Death Associated Protein Kinase Catalytic Domain
Length = 295
Score = 39.3 bits (90), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 24/67 (35%), Positives = 35/67 (52%), Gaps = 3/67 (4%)
Query: 3 VDWWALGVCIYEFVTGVLPFSDETPQKVFDNILANQLEWPEDEEALNPS--TEETILALL 60
D W++GV Y ++G PF +T Q+ N+ A E+ EDE N S ++ I LL
Sbjct: 198 ADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYEF-EDEYFSNTSALAKDFIRRLL 256
Query: 61 KSDPTQR 67
DP +R
Sbjct: 257 VKDPKKR 263
>pdb|1IG1|A Chain A, 1.8a X-Ray Structure Of Ternary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue And Mn.
pdb|1JKL|A Chain A, 1.6a X-Ray Structure Of Binary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue
pdb|1JKS|A Chain A, 1.5a X-Ray Structure Of Apo Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKT|A Chain A, Tetragonal Crystal Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKT|B Chain B, Tetragonal Crystal Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKK|A Chain A, 2.4a X-Ray Structure Of Ternary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue And Mg.
pdb|3F5G|A Chain A, Crystal Structure Of Death Associated Protein Kinase In
Complex With Adp And Mg2+
pdb|3EH9|A Chain A, Crystal Structure Of Death Associated Protein Kinase
Complexed With Adp
pdb|3EHA|A Chain A, Crystal Structure Of Death Associated Protein Kinase
Complexed With Amppnp
Length = 294
Score = 39.3 bits (90), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 24/67 (35%), Positives = 35/67 (52%), Gaps = 3/67 (4%)
Query: 3 VDWWALGVCIYEFVTGVLPFSDETPQKVFDNILANQLEWPEDEEALNPS--TEETILALL 60
D W++GV Y ++G PF +T Q+ N+ A E+ EDE N S ++ I LL
Sbjct: 197 ADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYEF-EDEYFSNTSALAKDFIRRLL 255
Query: 61 KSDPTQR 67
DP +R
Sbjct: 256 VKDPKKR 262
>pdb|3F5U|A Chain A, Crystal Structure Of The Death Associated Protein Kinase
In Complex With Amppnp And Mg2+
Length = 295
Score = 39.3 bits (90), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 24/67 (35%), Positives = 35/67 (52%), Gaps = 3/67 (4%)
Query: 3 VDWWALGVCIYEFVTGVLPFSDETPQKVFDNILANQLEWPEDEEALNPS--TEETILALL 60
D W++GV Y ++G PF +T Q+ N+ A E+ EDE N S ++ I LL
Sbjct: 198 ADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYEF-EDEYFSNTSALAKDFIRRLL 256
Query: 61 KSDPTQR 67
DP +R
Sbjct: 257 VKDPKKR 263
>pdb|3GU4|A Chain A, Crystal Structure Of Dapkq23v-Amppnp
pdb|3GU5|A Chain A, Crystal Structure Of Dapkq23v-Amppnp-Mg2+
pdb|3GU6|A Chain A, Crystal Structure Of Dapkq23v-Adp
pdb|3GU7|A Chain A, Crystal Structure Of Dapkq23v-Adp-Mg2+
Length = 295
Score = 39.3 bits (90), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 24/67 (35%), Positives = 35/67 (52%), Gaps = 3/67 (4%)
Query: 3 VDWWALGVCIYEFVTGVLPFSDETPQKVFDNILANQLEWPEDEEALNPS--TEETILALL 60
D W++GV Y ++G PF +T Q+ N+ A E+ EDE N S ++ I LL
Sbjct: 198 ADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYEF-EDEYFSNTSALAKDFIRRLL 256
Query: 61 KSDPTQR 67
DP +R
Sbjct: 257 VKDPKKR 263
>pdb|1P4F|A Chain A, Death Associated Protein Kinase Catalytic Domain With
Bound Inhibitor Fragment
Length = 293
Score = 39.3 bits (90), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 24/67 (35%), Positives = 35/67 (52%), Gaps = 3/67 (4%)
Query: 3 VDWWALGVCIYEFVTGVLPFSDETPQKVFDNILANQLEWPEDEEALNPS--TEETILALL 60
D W++GV Y ++G PF +T Q+ N+ A E+ EDE N S ++ I LL
Sbjct: 197 ADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYEF-EDEYFSNTSALAKDFIRRLL 255
Query: 61 KSDPTQR 67
DP +R
Sbjct: 256 VKDPKKR 262
>pdb|1KOA|A Chain A, Twitchin Kinase Fragment (C.Elegans), Autoregulated
Protein Kinase And Immunoglobulin Domains
Length = 491
Score = 38.9 bits (89), Expect = 7e-04, Method: Composition-based stats.
Identities = 23/77 (29%), Positives = 37/77 (48%), Gaps = 5/77 (6%)
Query: 4 DWWALGVCIYEFVTGVLPFSDETPQKVFDNILANQLEWPEDEEALNPSTEET---ILALL 60
D W++GV Y ++G+ PF E + N+ +W D+ A + +E+ I LL
Sbjct: 232 DMWSVGVLSYILLSGLSPFGGENDDETLRNV--KSCDWNMDDSAFSGISEDGKDFIRKLL 289
Query: 61 KSDPTQRPSGHQVRRLP 77
+DP R + HQ P
Sbjct: 290 LADPNTRMTIHQALEHP 306
>pdb|3MN3|A Chain A, An Inhibited Conformation For The Protein Kinase Domain Of
The Saccharomyces Cerevisiae Ampk Homolog Snf1
Length = 271
Score = 38.9 bits (89), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 23/71 (32%), Positives = 34/71 (47%), Gaps = 3/71 (4%)
Query: 3 VDWWALGVCIYEFVTGVLPFSDETPQKVFDNILANQLEWPEDEEALNPSTEETILALLKS 62
VD W+ GV +Y + LPF DE+ +F NI P + L+P I +L
Sbjct: 184 VDVWSCGVILYVMLCRRLPFDDESIPVLFKNISNGVYTLP---KFLSPGAAGLIKRMLIV 240
Query: 63 DPTQRPSGHQV 73
+P R S H++
Sbjct: 241 NPLNRISIHEI 251
>pdb|2QR7|A Chain A, 2.0a X-Ray Structure Of C-Terminal Kinase Domain Of P90
Ribosomal S6 Kinase 2: Se-Met Derivative
Length = 342
Score = 38.9 bits (89), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 22/81 (27%), Positives = 41/81 (50%), Gaps = 4/81 (4%)
Query: 1 SGVDWWALGVCIYEFVTGVLPFS---DETPQKVFDNILANQLEWPEDE-EALNPSTEETI 56
+ D W+LGV +Y +TG PF+ D+TP+++ I + + +++ + ++ +
Sbjct: 199 AACDIWSLGVLLYTXLTGYTPFANGPDDTPEEILARIGSGKFSLSGGYWNSVSDTAKDLV 258
Query: 57 LALLKSDPTQRPSGHQVRRLP 77
L DP QR + V R P
Sbjct: 259 SKXLHVDPHQRLTAALVLRHP 279
>pdb|2FH9|A Chain A, Structure And Dimerization Of The Kinase Domain From Yeast
Snf1
Length = 274
Score = 38.9 bits (89), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 23/71 (32%), Positives = 34/71 (47%), Gaps = 3/71 (4%)
Query: 3 VDWWALGVCIYEFVTGVLPFSDETPQKVFDNILANQLEWPEDEEALNPSTEETILALLKS 62
VD W+ GV +Y + LPF DE+ +F NI P + L+P I +L
Sbjct: 188 VDVWSCGVILYVMLCRRLPFDDESIPVLFKNISNGVYTLP---KFLSPGAAGLIKRMLIV 244
Query: 63 DPTQRPSGHQV 73
+P R S H++
Sbjct: 245 NPLNRISIHEI 255
>pdb|3HYH|A Chain A, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
pdb|3HYH|B Chain B, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
Length = 275
Score = 38.9 bits (89), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 23/71 (32%), Positives = 34/71 (47%), Gaps = 3/71 (4%)
Query: 3 VDWWALGVCIYEFVTGVLPFSDETPQKVFDNILANQLEWPEDEEALNPSTEETILALLKS 62
VD W+ GV +Y + LPF DE+ +F NI P + L+P I +L
Sbjct: 193 VDVWSCGVILYVMLCRRLPFDDESIPVLFKNISNGVYTLP---KFLSPGAAGLIKRMLIV 249
Query: 63 DPTQRPSGHQV 73
+P R S H++
Sbjct: 250 NPLNRISIHEI 260
>pdb|3DAE|A Chain A, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
pdb|3DAE|B Chain B, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
Length = 283
Score = 38.9 bits (89), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 23/71 (32%), Positives = 34/71 (47%), Gaps = 3/71 (4%)
Query: 3 VDWWALGVCIYEFVTGVLPFSDETPQKVFDNILANQLEWPEDEEALNPSTEETILALLKS 62
VD W+ GV +Y + LPF DE+ +F NI P + L+P I +L
Sbjct: 194 VDVWSCGVILYVMLCRRLPFDDESIPVLFKNISNGVYTLP---KFLSPGAAGLIKRMLIV 250
Query: 63 DPTQRPSGHQV 73
+P R S H++
Sbjct: 251 NPLNRISIHEI 261
>pdb|2X4F|A Chain A, The Crystal Structure Of The Human Myosin Light Chain
Kinase Loc340156.
pdb|2X4F|B Chain B, The Crystal Structure Of The Human Myosin Light Chain
Kinase Loc340156
Length = 373
Score = 38.1 bits (87), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 28/88 (31%), Positives = 44/88 (50%), Gaps = 3/88 (3%)
Query: 3 VDWWALGVCIYEFVTGVLPFSDETPQKVFDNILANQLEWPEDEEALNPSTE--ETILALL 60
D W++GV Y ++G+ PF + + +NILA + + EDEE + S E E I LL
Sbjct: 269 TDMWSVGVIAYMLLSGLSPFLGDNDAETLNNILACRWDL-EDEEFQDISEEAKEFISKLL 327
Query: 61 KSDPTQRPSGHQVRRLPMFKDYDWDSIL 88
+ + R S + + P D+ S L
Sbjct: 328 IKEKSWRISASEALKHPWLSDHKLHSRL 355
>pdb|3UTO|A Chain A, Twitchin Kinase Region From C.Elegans
(Fn31-Nl-Kin-Crd-Ig26)
pdb|3UTO|B Chain B, Twitchin Kinase Region From C.Elegans
(Fn31-Nl-Kin-Crd-Ig26)
Length = 573
Score = 38.1 bits (87), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 23/78 (29%), Positives = 37/78 (47%), Gaps = 5/78 (6%)
Query: 3 VDWWALGVCIYEFVTGVLPFSDETPQKVFDNILANQLEWPEDEEALNPSTEET---ILAL 59
D W++GV Y ++G+ PF E + N+ +W D+ A + +E+ I L
Sbjct: 337 TDMWSVGVLSYILLSGLSPFGGENDDETLRNV--KSCDWNMDDSAFSGISEDGKDFIRKL 394
Query: 60 LKSDPTQRPSGHQVRRLP 77
L +DP R + HQ P
Sbjct: 395 LLADPNTRMTIHQALEHP 412
>pdb|3IEC|A Chain A, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|B Chain B, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|C Chain C, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|D Chain D, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
Length = 319
Score = 38.1 bits (87), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 19/73 (26%), Positives = 38/73 (52%), Gaps = 3/73 (4%)
Query: 3 VDWWALGVCIYEFVTGVLPFSDETPQKVFDNILANQLEWPEDEEALNPSTEETILALLKS 62
VD W+LGV +Y V+G LPF + +++ + +L + P ++ E + L
Sbjct: 187 VDVWSLGVILYTLVSGSLPFDGQNLKELRERVLRGKYRIP---FYMSTDCENLLKKFLIL 243
Query: 63 DPTQRPSGHQVRR 75
+P++R + Q+ +
Sbjct: 244 NPSKRGTLEQIMK 256
>pdb|2R0I|A Chain A, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
pdb|2R0I|B Chain B, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
Length = 327
Score = 38.1 bits (87), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 19/73 (26%), Positives = 38/73 (52%), Gaps = 3/73 (4%)
Query: 3 VDWWALGVCIYEFVTGVLPFSDETPQKVFDNILANQLEWPEDEEALNPSTEETILALLKS 62
VD W+LGV +Y V+G LPF + +++ + +L + P ++ E + L
Sbjct: 194 VDVWSLGVILYTLVSGSLPFDGQNLKELRERVLRGKYRIP---FYMSTDCENLLKKFLIL 250
Query: 63 DPTQRPSGHQVRR 75
+P++R + Q+ +
Sbjct: 251 NPSKRGTLEQIMK 263
>pdb|1ZMV|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
pdb|1ZMV|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
Length = 327
Score = 38.1 bits (87), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 19/73 (26%), Positives = 38/73 (52%), Gaps = 3/73 (4%)
Query: 3 VDWWALGVCIYEFVTGVLPFSDETPQKVFDNILANQLEWPEDEEALNPSTEETILALLKS 62
VD W+LGV +Y V+G LPF + +++ + +L + P ++ E + L
Sbjct: 194 VDVWSLGVILYTLVSGSLPFDGQNLKELRERVLRGKYRIP---FYMSTDCENLLKKFLIL 250
Query: 63 DPTQRPSGHQVRR 75
+P++R + Q+ +
Sbjct: 251 NPSKRGTLEQIMK 263
>pdb|3DAK|A Chain A, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|B Chain B, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|C Chain C, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|D Chain D, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
Length = 290
Score = 37.7 bits (86), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/84 (30%), Positives = 38/84 (45%), Gaps = 7/84 (8%)
Query: 4 DWWALGVCIYEFVTGVLPFSDETPQKVFDNILAN---QLEWP-EDEEAL---NPSTEETI 56
D W+ G+ E TG P+ P KV L N LE +D+E L S + I
Sbjct: 204 DIWSFGITAIELATGAAPYHKYPPMKVLMLTLQNDPPSLETGVQDKEMLKKYGKSFRKMI 263
Query: 57 LALLKSDPTQRPSGHQVRRLPMFK 80
L+ DP +RP+ ++ R F+
Sbjct: 264 SLCLQKDPEKRPTAAELLRHKFFQ 287
>pdb|2VWI|A Chain A, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|B Chain B, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|C Chain C, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|D Chain D, Structure Of The Osr1 Kinase, A Hypertension Drug Target
Length = 303
Score = 37.7 bits (86), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/85 (30%), Positives = 38/85 (44%), Gaps = 7/85 (8%)
Query: 3 VDWWALGVCIYEFVTGVLPFSDETPQKVFDNILAN---QLEWP-EDEEAL---NPSTEET 55
D W+ G+ E TG P+ P KV L N LE +D+E L S +
Sbjct: 208 ADIWSFGITAIELATGAAPYHKYPPMKVLMLTLQNDPPSLETGVQDKEMLKKYGKSFRKM 267
Query: 56 ILALLKSDPTQRPSGHQVRRLPMFK 80
I L+ DP +RP+ ++ R F+
Sbjct: 268 ISLCLQKDPEKRPTAAELLRHKFFQ 292
>pdb|1ZMU|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
pdb|1ZMU|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
Length = 327
Score = 37.7 bits (86), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 19/73 (26%), Positives = 38/73 (52%), Gaps = 3/73 (4%)
Query: 3 VDWWALGVCIYEFVTGVLPFSDETPQKVFDNILANQLEWPEDEEALNPSTEETILALLKS 62
VD W+LGV +Y V+G LPF + +++ + +L + P ++ E + L
Sbjct: 194 VDVWSLGVILYTLVSGSLPFDGQNLKELRERVLRGKYRIP---FYMSTDCENLLKKFLIL 250
Query: 63 DPTQRPSGHQVRR 75
+P++R + Q+ +
Sbjct: 251 NPSKRGTLEQIMK 263
>pdb|1ZMW|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
pdb|1ZMW|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
Length = 327
Score = 37.7 bits (86), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 19/73 (26%), Positives = 38/73 (52%), Gaps = 3/73 (4%)
Query: 3 VDWWALGVCIYEFVTGVLPFSDETPQKVFDNILANQLEWPEDEEALNPSTEETILALLKS 62
VD W+LGV +Y V+G LPF + +++ + +L + P ++ E + L
Sbjct: 194 VDVWSLGVILYTLVSGSLPFDGQNLKELRERVLRGKYRIP---FYMSTDCENLLKKFLIL 250
Query: 63 DPTQRPSGHQVRR 75
+P++R + Q+ +
Sbjct: 251 NPSKRGTLEQIMK 263
>pdb|2WZJ|A Chain A, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|B Chain B, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|C Chain C, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|D Chain D, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|E Chain E, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|F Chain F, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
Length = 327
Score = 37.7 bits (86), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 19/73 (26%), Positives = 38/73 (52%), Gaps = 3/73 (4%)
Query: 3 VDWWALGVCIYEFVTGVLPFSDETPQKVFDNILANQLEWPEDEEALNPSTEETILALLKS 62
VD W+LGV +Y V+G LPF + +++ + +L + P ++ E + L
Sbjct: 194 VDVWSLGVILYTLVSGSLPFDGQNLKELRERVLRGKYRIP---FYMSTDCENLLKKFLIL 250
Query: 63 DPTQRPSGHQVRR 75
+P++R + Q+ +
Sbjct: 251 NPSKRGTLEQIMK 263
>pdb|4AF3|A Chain A, Human Aurora B Kinase In Complex With Incenp And Vx-680
Length = 292
Score = 37.7 bits (86), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 18/65 (27%), Positives = 34/65 (52%), Gaps = 3/65 (4%)
Query: 3 VDWWALGVCIYEFVTGVLPFSDETPQKVFDNILANQLEWPEDEEALNPSTEETILALLKS 62
VD W +GV YE + G PF + + + I+ L++P ++ ++ I LL+
Sbjct: 202 VDLWCIGVLCYELLVGNPPFESASHNETYRRIVKVDLKFP---ASVPTGAQDLISKLLRH 258
Query: 63 DPTQR 67
+P++R
Sbjct: 259 NPSER 263
>pdb|2QG5|A Chain A, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
pdb|2QG5|B Chain B, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
pdb|2QG5|D Chain D, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
Length = 294
Score = 37.7 bits (86), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 23/71 (32%), Positives = 32/71 (45%), Gaps = 1/71 (1%)
Query: 4 DWWALGVCIYEFVTGVLPFSDETPQKVFDNILANQLEWPEDE-EALNPSTEETILALLKS 62
D W+ GV +Y + G PFS T +V I +PE + ++P E I LL
Sbjct: 206 DEWSAGVMMYVLLCGYPPFSAPTDXEVMLKIREGTFTFPEKDWLNVSPQAESLIRRLLTK 265
Query: 63 DPTQRPSGHQV 73
P QR + Q
Sbjct: 266 SPKQRITSLQA 276
>pdb|3UJG|A Chain A, Crystal Structure Of Snrk2.6 In Complex With Hab1
Length = 361
Score = 37.4 bits (85), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/85 (29%), Positives = 39/85 (45%), Gaps = 11/85 (12%)
Query: 4 DWWALGVCIYEFVTGVLPFSD-ETPQ---KVFDNILANQLEWPEDEEALNPSTEETILAL 59
D W+ GV +Y + G PF D E P+ K IL Q P D ++P I +
Sbjct: 198 DVWSCGVTLYVMLVGAYPFEDPEEPKNFRKTIHRILNVQYAIP-DYVHISPECRHLISRI 256
Query: 60 LKSDPTQRPSGHQVRRLPMFKDYDW 84
+DP +R S +P ++++W
Sbjct: 257 FVADPAKRIS------IPEIRNHEW 275
>pdb|3UC4|A Chain A, The Crystal Structure Of Snf1-Related Kinase 2.6
pdb|3UC4|B Chain B, The Crystal Structure Of Snf1-Related Kinase 2.6
Length = 362
Score = 37.4 bits (85), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/85 (29%), Positives = 39/85 (45%), Gaps = 11/85 (12%)
Query: 4 DWWALGVCIYEFVTGVLPFSD-ETPQ---KVFDNILANQLEWPEDEEALNPSTEETILAL 59
D W+ GV +Y + G PF D E P+ K IL Q P D ++P I +
Sbjct: 199 DVWSCGVTLYVMLVGAYPFEDPEEPKNFRKTIHRILNVQYAIP-DYVHISPECRHLISRI 257
Query: 60 LKSDPTQRPSGHQVRRLPMFKDYDW 84
+DP +R S +P ++++W
Sbjct: 258 FVADPAKRIS------IPEIRNHEW 276
>pdb|3F3Z|A Chain A, Crystal Structure Of Cryptosporidium Parvum Calcium
Dependent Protein Kinase Cgd7_1840 In Presence Of
Indirubin E804
Length = 277
Score = 37.4 bits (85), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 23/71 (32%), Positives = 32/71 (45%), Gaps = 1/71 (1%)
Query: 4 DWWALGVCIYEFVTGVLPFSDETPQKVFDNILANQLEWPEDE-EALNPSTEETILALLKS 62
D W+ GV +Y + G PFS T +V I +PE + ++P E I LL
Sbjct: 189 DEWSAGVMMYVLLCGYPPFSAPTDXEVMLKIREGTFTFPEKDWLNVSPQAESLIRRLLTK 248
Query: 63 DPTQRPSGHQV 73
P QR + Q
Sbjct: 249 SPKQRITSLQA 259
>pdb|2VRX|A Chain A, Structure Of Aurora B Kinase In Complex With Zm447439
pdb|2VRX|B Chain B, Structure Of Aurora B Kinase In Complex With Zm447439
Length = 285
Score = 37.4 bits (85), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 21/65 (32%), Positives = 33/65 (50%), Gaps = 3/65 (4%)
Query: 3 VDWWALGVCIYEFVTGVLPFSDETPQKVFDNILANQLEWPEDEEALNPSTEETILALLKS 62
VD W GV YEF+ G+ PF + + I+ L++P L+ +++ I LL+
Sbjct: 194 VDLWCAGVLCYEFLVGMPPFDSPSHTETHRRIVNVDLKFP---PFLSDGSKDLISKLLRY 250
Query: 63 DPTQR 67
P QR
Sbjct: 251 HPPQR 255
>pdb|2BFX|A Chain A, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2BFX|B Chain B, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2VGP|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGP|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGO|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|2VGO|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|3ZTX|A Chain A, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen.
pdb|3ZTX|B Chain B, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen
Length = 284
Score = 37.4 bits (85), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 21/65 (32%), Positives = 33/65 (50%), Gaps = 3/65 (4%)
Query: 3 VDWWALGVCIYEFVTGVLPFSDETPQKVFDNILANQLEWPEDEEALNPSTEETILALLKS 62
VD W GV YEF+ G+ PF + + I+ L++P L+ +++ I LL+
Sbjct: 193 VDLWCAGVLCYEFLVGMPPFDSPSHTETHRRIVNVDLKFP---PFLSDGSKDLISKLLRY 249
Query: 63 DPTQR 67
P QR
Sbjct: 250 HPPQR 254
>pdb|3ZUT|A Chain A, The Structure Of Ost1 (D160a) Kinase
pdb|3ZUT|B Chain B, The Structure Of Ost1 (D160a) Kinase
Length = 362
Score = 37.4 bits (85), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/85 (29%), Positives = 39/85 (45%), Gaps = 11/85 (12%)
Query: 4 DWWALGVCIYEFVTGVLPFSD-ETPQ---KVFDNILANQLEWPEDEEALNPSTEETILAL 59
D W+ GV +Y + G PF D E P+ K IL Q P D ++P I +
Sbjct: 199 DVWSCGVTLYVMLVGAYPFEDPEEPKNFRKTIHRILNVQYAIP-DYVHISPECRHLISRI 257
Query: 60 LKSDPTQRPSGHQVRRLPMFKDYDW 84
+DP +R S +P ++++W
Sbjct: 258 FVADPAKRIS------IPEIRNHEW 276
>pdb|3ZUU|A Chain A, The Structure Of Ost1 (D160a, S175d) Kinase In Complex
With Gold
pdb|3ZUU|B Chain B, The Structure Of Ost1 (D160a, S175d) Kinase In Complex
With Gold
Length = 362
Score = 37.4 bits (85), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/85 (29%), Positives = 39/85 (45%), Gaps = 11/85 (12%)
Query: 4 DWWALGVCIYEFVTGVLPFSD-ETPQ---KVFDNILANQLEWPEDEEALNPSTEETILAL 59
D W+ GV +Y + G PF D E P+ K IL Q P D ++P I +
Sbjct: 199 DVWSCGVTLYVMLVGAYPFEDPEEPKNFRKTIHRILNVQYAIP-DYVHISPECRHLISRI 257
Query: 60 LKSDPTQRPSGHQVRRLPMFKDYDW 84
+DP +R S +P ++++W
Sbjct: 258 FVADPAKRIS------IPEIRNHEW 276
>pdb|2BFY|A Chain A, Complex Of Aurora-B With Incenp And Hesperidin.
pdb|2BFY|B Chain B, Complex Of Aurora-B With Incenp And Hesperidin
Length = 284
Score = 37.4 bits (85), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 21/65 (32%), Positives = 33/65 (50%), Gaps = 3/65 (4%)
Query: 3 VDWWALGVCIYEFVTGVLPFSDETPQKVFDNILANQLEWPEDEEALNPSTEETILALLKS 62
VD W GV YEF+ G+ PF + + I+ L++P L+ +++ I LL+
Sbjct: 193 VDLWCAGVLCYEFLVGMPPFDSPSHTETHRRIVNVDLKFP---PFLSDGSKDLISKLLRY 249
Query: 63 DPTQR 67
P QR
Sbjct: 250 HPPQR 254
>pdb|3UDB|A Chain A, Crystal Structure Of Snrk2.6
pdb|3UDB|B Chain B, Crystal Structure Of Snrk2.6
pdb|3UDB|C Chain C, Crystal Structure Of Snrk2.6
pdb|3UDB|D Chain D, Crystal Structure Of Snrk2.6
pdb|3UDB|E Chain E, Crystal Structure Of Snrk2.6
pdb|3UDB|F Chain F, Crystal Structure Of Snrk2.6
Length = 317
Score = 37.4 bits (85), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/85 (29%), Positives = 39/85 (45%), Gaps = 11/85 (12%)
Query: 4 DWWALGVCIYEFVTGVLPFSD-ETPQ---KVFDNILANQLEWPEDEEALNPSTEETILAL 59
D W+ GV +Y + G PF D E P+ K IL Q P D ++P I +
Sbjct: 199 DVWSCGVTLYVMLVGAYPFEDPEEPKNFRKTIHRILNVQYAIP-DYVHISPECRHLISRI 257
Query: 60 LKSDPTQRPSGHQVRRLPMFKDYDW 84
+DP +R S +P ++++W
Sbjct: 258 FVADPAKRIS------IPEIRNHEW 276
>pdb|3FE3|A Chain A, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
pdb|3FE3|B Chain B, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
Length = 328
Score = 37.4 bits (85), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 19/73 (26%), Positives = 37/73 (50%), Gaps = 3/73 (4%)
Query: 3 VDWWALGVCIYEFVTGVLPFSDETPQKVFDNILANQLEWPEDEEALNPSTEETILALLKS 62
VD W+LGV +Y V+G LPF + +++ + +L + P ++ E + L
Sbjct: 195 VDVWSLGVILYTLVSGSLPFDGQNLKELRERVLRGKYRIP---FYMSTDCENLLKRFLVL 251
Query: 63 DPTQRPSGHQVRR 75
+P +R + Q+ +
Sbjct: 252 NPIKRGTLEQIMK 264
>pdb|3FHR|A Chain A, High Resolution Crystal Structure Of Mitogen-Activated
Protein Kinase-Activated Protein Kinase 3
(Mk3)-Inhibitor Complex
pdb|3FXW|A Chain A, High Resolution Crystal Structure Of Mitogen-Activated
Protein Kinase- Activated Protein Kinase 3INHIBITOR 2
COMPLEX
Length = 336
Score = 37.0 bits (84), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 23/69 (33%), Positives = 34/69 (49%), Gaps = 5/69 (7%)
Query: 4 DWWALGVCIYEFVTGVLPFSDETPQKVF----DNILANQLEWPEDE-EALNPSTEETILA 58
D W+LGV +Y + G PF T Q + I Q +P E ++ ++ I
Sbjct: 211 DMWSLGVIMYILLCGFPPFYSNTGQAISPGMKRRIRLGQYGFPNPEWSEVSEDAKQLIRL 270
Query: 59 LLKSDPTQR 67
LLK+DPT+R
Sbjct: 271 LLKTDPTER 279
>pdb|3R1N|A Chain A, Mk3 Kinase Bound To Compound 5b
pdb|3SHE|A Chain A, Novel Atp-Competitive Mk2 Inhibitors With Potent
Biochemical And Cell- Based Activity Throughout The
Series
Length = 317
Score = 37.0 bits (84), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 23/69 (33%), Positives = 34/69 (49%), Gaps = 5/69 (7%)
Query: 4 DWWALGVCIYEFVTGVLPFSDETPQKVF----DNILANQLEWPEDE-EALNPSTEETILA 58
D W+LGV +Y + G PF T Q + I Q +P E ++ ++ I
Sbjct: 192 DMWSLGVIMYILLCGFPPFYSNTGQAISPGMKRRIRLGQYGFPNPEWSEVSEDAKQLIRL 251
Query: 59 LLKSDPTQR 67
LLK+DPT+R
Sbjct: 252 LLKTDPTER 260
>pdb|2QNJ|A Chain A, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
pdb|2QNJ|B Chain B, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
Length = 328
Score = 37.0 bits (84), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 19/73 (26%), Positives = 37/73 (50%), Gaps = 3/73 (4%)
Query: 3 VDWWALGVCIYEFVTGVLPFSDETPQKVFDNILANQLEWPEDEEALNPSTEETILALLKS 62
VD W+LGV +Y V+G LPF + +++ + +L + P ++ E + L
Sbjct: 192 VDVWSLGVILYTLVSGSLPFDGQNLKELRERVLRGKYRIP---FYMSTDCENLLKRFLVL 248
Query: 63 DPTQRPSGHQVRR 75
+P +R + Q+ +
Sbjct: 249 NPIKRGTLEQIMK 261
>pdb|2A27|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|B Chain B, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|C Chain C, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|D Chain D, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|E Chain E, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|F Chain F, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|G Chain G, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|H Chain H, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
Length = 321
Score = 36.6 bits (83), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 23/77 (29%), Positives = 39/77 (50%), Gaps = 5/77 (6%)
Query: 4 DWWALGVCIYEFVTGVLPFSDETPQKVFDNILANQLEWPEDEEALNPSTE---ETILALL 60
D W++GV Y ++G PF +T Q+ NI A + + DEE + ++E + I LL
Sbjct: 200 DMWSIGVITYILLSGASPFLGDTKQETLANITA--VSYDFDEEFFSQTSELAKDFIRKLL 257
Query: 61 KSDPTQRPSGHQVRRLP 77
+ +R + + R P
Sbjct: 258 VKETRKRLTIQEALRHP 274
>pdb|1WMK|A Chain A, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|E Chain E, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|C Chain C, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|B Chain B, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|F Chain F, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|D Chain D, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|H Chain H, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|G Chain G, Human Death-Associated Kinase Drp-1, Mutant S308d D40
Length = 321
Score = 36.6 bits (83), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 23/77 (29%), Positives = 39/77 (50%), Gaps = 5/77 (6%)
Query: 4 DWWALGVCIYEFVTGVLPFSDETPQKVFDNILANQLEWPEDEEALNPSTE---ETILALL 60
D W++GV Y ++G PF +T Q+ NI A + + DEE + ++E + I LL
Sbjct: 200 DMWSIGVITYILLSGASPFLGDTKQETLANITA--VSYDFDEEFFSQTSELAKDFIRKLL 257
Query: 61 KSDPTQRPSGHQVRRLP 77
+ +R + + R P
Sbjct: 258 VKETRKRLTIQEALRHP 274
>pdb|2YA9|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
pdb|2YA9|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
pdb|2YAA|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Atp
pdb|2YAA|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Atp
pdb|2YAB|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Amp
pdb|2YAB|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Amp
Length = 361
Score = 36.6 bits (83), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 23/77 (29%), Positives = 39/77 (50%), Gaps = 5/77 (6%)
Query: 4 DWWALGVCIYEFVTGVLPFSDETPQKVFDNILANQLEWPEDEEALNPSTE---ETILALL 60
D W++GV Y ++G PF +T Q+ NI A + + DEE + ++E + I LL
Sbjct: 200 DMWSIGVITYILLSGASPFLGDTKQETLANITA--VSYDFDEEFFSQTSELAKDFIRKLL 257
Query: 61 KSDPTQRPSGHQVRRLP 77
+ +R + + R P
Sbjct: 258 VKETRKRLTIQEALRHP 274
>pdb|1Y8G|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
pdb|1Y8G|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
Length = 327
Score = 36.6 bits (83), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 21/75 (28%), Positives = 38/75 (50%), Gaps = 7/75 (9%)
Query: 3 VDWWALGVCIYEFVTGVLPFSDETPQKVFDNILANQLEWPEDEEALNPST--EETILALL 60
VD W+LGV +Y V+G LPF + +++ + +L + P ST E + L
Sbjct: 194 VDVWSLGVILYTLVSGSLPFDGQNLKELRERVLRGKYRIP-----FYXSTDCENLLKKFL 248
Query: 61 KSDPTQRPSGHQVRR 75
+P++R + Q+ +
Sbjct: 249 ILNPSKRGTLEQIXK 263
>pdb|2HAK|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|C Chain C, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|D Chain D, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|E Chain E, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|F Chain F, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|G Chain G, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|H Chain H, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
Length = 328
Score = 36.2 bits (82), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 14/40 (35%), Positives = 24/40 (60%)
Query: 3 VDWWALGVCIYEFVTGVLPFSDETPQKVFDNILANQLEWP 42
VD W+LGV +Y V+G LPF + +++ + +L + P
Sbjct: 195 VDVWSLGVILYTLVSGSLPFDGQNLKELRERVLRGKYRIP 234
>pdb|3HZT|A Chain A, Crystal Structure Of Toxoplasma Gondii Cdpk3,
Tgme49_105860
Length = 467
Score = 35.8 bits (81), Expect = 0.006, Method: Composition-based stats.
Identities = 17/75 (22%), Positives = 36/75 (48%), Gaps = 1/75 (1%)
Query: 4 DWWALGVCIYEFVTGVLPFSDETPQKVFDNILANQLEW-PEDEEALNPSTEETILALLKS 62
D W+ GV +Y + G PF +T Q++ + + + P D ++ ++ + +L
Sbjct: 187 DVWSCGVILYILLCGYPPFGGQTDQEILKRVEKGKFSFDPPDWTQVSDEAKQLVKLMLTY 246
Query: 63 DPTQRPSGHQVRRLP 77
+P++R S + P
Sbjct: 247 EPSKRISAEEALNHP 261
>pdb|3UC3|A Chain A, The Crystal Structure Of Snf1-Related Kinase 2.3
Length = 361
Score = 35.8 bits (81), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 25/86 (29%), Positives = 38/86 (44%), Gaps = 11/86 (12%)
Query: 3 VDWWALGVCIYEFVTGVLPFSD-ETP---QKVFDNILANQLEWPEDEEALNPSTEETILA 58
D W+ GV +Y + G PF D E P +K IL+ + P+D ++P I
Sbjct: 199 ADVWSCGVTLYVMLVGAYPFEDPEEPRDYRKTIQRILSVKYSIPDDIR-ISPECCHLISR 257
Query: 59 LLKSDPTQRPSGHQVRRLPMFKDYDW 84
+ +DP R S +P K + W
Sbjct: 258 IFVADPATRIS------IPEIKTHSW 277
>pdb|3LM0|A Chain A, Crystal Structure Of Human SerineTHREONINE KINASE 17B
(STK17B)
pdb|3LM5|A Chain A, Crystal Structure Of Human SerineTHREONINE KINASE 17B
(STK17B) IN Complex With Quercetin
Length = 327
Score = 35.4 bits (80), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 18/71 (25%), Positives = 36/71 (50%), Gaps = 1/71 (1%)
Query: 1 SGVDWWALGVCIYEFVTGVLPFSDETPQKVFDNILANQLEWPEDE-EALNPSTEETILAL 59
+ D W +G+ Y +T PF E Q+ + NI +++ E+ +++ + I +L
Sbjct: 212 TATDMWNIGIIAYMLLTHTSPFVGEDNQETYLNISQVNVDYSEETFSSVSQLATDFIQSL 271
Query: 60 LKSDPTQRPSG 70
L +P +RP+
Sbjct: 272 LVKNPEKRPTA 282
>pdb|2A2A|A Chain A, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|B Chain B, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|C Chain C, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|D Chain D, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2CKE|A Chain A, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|B Chain B, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|C Chain C, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|D Chain D, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
Length = 321
Score = 35.4 bits (80), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 22/77 (28%), Positives = 39/77 (50%), Gaps = 5/77 (6%)
Query: 4 DWWALGVCIYEFVTGVLPFSDETPQKVFDNILANQLEWPEDEEALNPSTE---ETILALL 60
D W++GV Y ++G PF +T Q+ NI + ++ DEE + ++E + I LL
Sbjct: 200 DMWSIGVITYILLSGASPFLGDTKQETLANITSVSYDF--DEEFFSHTSELAKDFIRKLL 257
Query: 61 KSDPTQRPSGHQVRRLP 77
+ +R + + R P
Sbjct: 258 VKETRKRLTIQEALRHP 274
>pdb|1Z9X|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
pdb|1Z9X|B Chain B, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
pdb|1Z9X|C Chain C, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
Length = 321
Score = 35.4 bits (80), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 22/77 (28%), Positives = 39/77 (50%), Gaps = 5/77 (6%)
Query: 4 DWWALGVCIYEFVTGVLPFSDETPQKVFDNILANQLEWPEDEEALNPSTE---ETILALL 60
D W++GV Y ++G PF +T Q+ NI + + + DEE + ++E + I LL
Sbjct: 200 DMWSIGVITYILLSGASPFLGDTKQETLANITS--VSYDFDEEFFSHTSELAKDFIRKLL 257
Query: 61 KSDPTQRPSGHQVRRLP 77
+ +R + + R P
Sbjct: 258 VKETRKRLTIQEALRHP 274
>pdb|1ZWS|A Chain A, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|B Chain B, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|C Chain C, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|D Chain D, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|E Chain E, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|F Chain F, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|G Chain G, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|H Chain H, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
Length = 288
Score = 35.0 bits (79), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 22/77 (28%), Positives = 39/77 (50%), Gaps = 5/77 (6%)
Query: 4 DWWALGVCIYEFVTGVLPFSDETPQKVFDNILANQLEWPEDEEALNPSTE---ETILALL 60
D W++GV Y ++G PF +T Q+ NI + ++ DEE + ++E + I LL
Sbjct: 200 DMWSIGVITYILLSGASPFLGDTKQETLANITSVSYDF--DEEFFSHTSELAKDFIRKLL 257
Query: 61 KSDPTQRPSGHQVRRLP 77
+ +R + + R P
Sbjct: 258 VKETRKRLTIQEALRHP 274
>pdb|3F61|A Chain A, Crystal Structure Of M. Tuberculosis Pknb
Leu33aspVAL222ASP DOUBLE MUTANT IN COMPLEX WITH ADP
Length = 311
Score = 35.0 bits (79), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 17/65 (26%), Positives = 33/65 (50%), Gaps = 1/65 (1%)
Query: 4 DWWALGVCIYEFVTGVLPFSDETPQKV-FDNILANQLEWPEDEEALNPSTEETILALLKS 62
D ++LG +YE +TG PF+ ++P V + ++ + + E L+ + +L L
Sbjct: 201 DVYSLGCVLYEVLTGEPPFTGDSPDSVAYQHVREDPIPPSARHEGLSADLDAVVLKALAK 260
Query: 63 DPTQR 67
+P R
Sbjct: 261 NPENR 265
>pdb|2HW6|A Chain A, Crystal Structure Of Mnk1 Catalytic Domain
pdb|2HW6|B Chain B, Crystal Structure Of Mnk1 Catalytic Domain
Length = 307
Score = 35.0 bits (79), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 25/90 (27%), Positives = 41/90 (45%), Gaps = 16/90 (17%)
Query: 4 DWWALGVCIYEFVTGVLPFSDETP---------------QKVFDNILANQLEWPEDEEA- 47
D W+LGV +Y ++G PF K+F++I + E+P+ + A
Sbjct: 208 DLWSLGVVLYIMLSGYPPFVGHCGADCGWDRGEVCRVCQNKLFESIQEGKYEFPDKDWAH 267
Query: 48 LNPSTEETILALLKSDPTQRPSGHQVRRLP 77
++ ++ I LL D QR S QV + P
Sbjct: 268 ISSEAKDLISKLLVRDAKQRLSAAQVLQHP 297
>pdb|3I6W|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|B Chain B, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|C Chain C, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|D Chain D, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|E Chain E, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|F Chain F, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|G Chain G, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|H Chain H, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
Length = 443
Score = 34.7 bits (78), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 24/84 (28%), Positives = 41/84 (48%), Gaps = 2/84 (2%)
Query: 2 GVDWWALGVCIYEFVTGVLPFSDETPQ-KVFDNILANQLEW-PEDEEALNPSTEETILAL 59
VD W+LGV ++ ++G PFS+ Q + D I + + + PE ++ + + L
Sbjct: 338 AVDCWSLGVILFICLSGYPPFSEHRTQVSLKDQITSGKYNFIPEVWAEVSEKALDLVKKL 397
Query: 60 LKSDPTQRPSGHQVRRLPMFKDYD 83
L DP R + + R P +D D
Sbjct: 398 LVVDPKARFTTEEALRHPWLQDED 421
>pdb|3I6U|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6U|B Chain B, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
Length = 419
Score = 34.7 bits (78), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 24/84 (28%), Positives = 41/84 (48%), Gaps = 2/84 (2%)
Query: 2 GVDWWALGVCIYEFVTGVLPFSDETPQ-KVFDNILANQLEW-PEDEEALNPSTEETILAL 59
VD W+LGV ++ ++G PFS+ Q + D I + + + PE ++ + + L
Sbjct: 324 AVDCWSLGVILFICLSGYPPFSEHRTQVSLKDQITSGKYNFIPEVWAEVSEKALDLVKKL 383
Query: 60 LKSDPTQRPSGHQVRRLPMFKDYD 83
L DP R + + R P +D D
Sbjct: 384 LVVDPKARFTTEEALRHPWLQDED 407
>pdb|3CIK|A Chain A, Human Grk2 In Complex With Gbetagamma Subunits
pdb|3V5W|A Chain A, Human G Protein-Coupled Receptor Kinase 2 In Complex With
Soluble Gbetagamma Subunits And Paroxetine
Length = 689
Score = 34.7 bits (78), Expect = 0.014, Method: Composition-based stats.
Identities = 21/96 (21%), Positives = 41/96 (42%), Gaps = 11/96 (11%)
Query: 1 SGVDWWALGVCIYEFVTGVLPFSDETPQ---KVFDNILANQLEWPEDEEALNPSTEETIL 57
S DW++LG +++ + G PF + ++ L +E P ++ +P +
Sbjct: 370 SSADWFSLGCMLFKLLRGHSPFRQHKTKDKHEIDRMTLTMAVELP---DSFSPELRSLLE 426
Query: 58 ALLKSDPTQR-----PSGHQVRRLPMFKDYDWDSIL 88
LL+ D +R +V+ P F+ DW +
Sbjct: 427 GLLQRDVNRRLGCLGRGAQEVKESPFFRSLDWQMVF 462
>pdb|3KRW|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol
(Soak)
pdb|3KRX|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol
(Co-Crystal)
Length = 688
Score = 34.7 bits (78), Expect = 0.014, Method: Composition-based stats.
Identities = 21/96 (21%), Positives = 41/96 (42%), Gaps = 11/96 (11%)
Query: 1 SGVDWWALGVCIYEFVTGVLPFSDETPQ---KVFDNILANQLEWPEDEEALNPSTEETIL 57
S DW++LG +++ + G PF + ++ L +E P ++ +P +
Sbjct: 369 SSADWFSLGCMLFKLLRGHSPFRQHKTKDKHEIDRMTLTMAVELP---DSFSPELRSLLE 425
Query: 58 ALLKSDPTQR-----PSGHQVRRLPMFKDYDWDSIL 88
LL+ D +R +V+ P F+ DW +
Sbjct: 426 GLLQRDVNRRLGCLGRGAQEVKESPFFRSLDWQMVF 461
>pdb|1OMW|A Chain A, Crystal Structure Of The Complex Between G Protein-Coupled
Receptor Kinase 2 And Heterotrimeric G Protein Beta 1
And Gamma 2 Subunits
pdb|1YM7|A Chain A, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|B Chain B, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|C Chain C, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|D Chain D, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|2BCJ|A Chain A, Crystal Structure Of G Protein-coupled Receptor Kinase 2
In Complex With Galpha-q And Gbetagamma Subunits
pdb|3UZS|A Chain A, Structure Of The C13.28 Rna Aptamer Bound To The G
Protein-Coupled Receptor Kinase 2-Heterotrimeric G
Protein Beta 1 And Gamma 2 Subunit Complex
pdb|3UZT|A Chain A, Structure Of The C13.18 Rna Aptamer In Complex With G
Protein-Coupled Receptor Kinase 2
Length = 689
Score = 34.7 bits (78), Expect = 0.014, Method: Composition-based stats.
Identities = 21/96 (21%), Positives = 41/96 (42%), Gaps = 11/96 (11%)
Query: 1 SGVDWWALGVCIYEFVTGVLPFSDETPQ---KVFDNILANQLEWPEDEEALNPSTEETIL 57
S DW++LG +++ + G PF + ++ L +E P ++ +P +
Sbjct: 370 SSADWFSLGCMLFKLLRGHSPFRQHKTKDKHEIDRMTLTMAVELP---DSFSPELRSLLE 426
Query: 58 ALLKSDPTQR-----PSGHQVRRLPMFKDYDWDSIL 88
LL+ D +R +V+ P F+ DW +
Sbjct: 427 GLLQRDVNRRLGCLGRGAQEVKESPFFRSLDWQMVF 462
>pdb|3PSC|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits
pdb|3PVU|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits And A
Selective Kinase Inhibitor (Cmpd101)
pdb|3PVW|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits And A
Selective Kinase Inhibitor (Cmpd103a)
Length = 695
Score = 34.7 bits (78), Expect = 0.014, Method: Composition-based stats.
Identities = 21/96 (21%), Positives = 41/96 (42%), Gaps = 11/96 (11%)
Query: 1 SGVDWWALGVCIYEFVTGVLPFSDETPQ---KVFDNILANQLEWPEDEEALNPSTEETIL 57
S DW++LG +++ + G PF + ++ L +E P ++ +P +
Sbjct: 370 SSADWFSLGCMLFKLLRGHSPFRQHKTKDKHEIDRMTLTMAVELP---DSFSPELRSLLE 426
Query: 58 ALLKSDPTQR-----PSGHQVRRLPMFKDYDWDSIL 88
LL+ D +R +V+ P F+ DW +
Sbjct: 427 GLLQRDVNRRLGCLGRGAQEVKESPFFRSLDWQMVF 462
>pdb|3LIJ|A Chain A, Crystal Structure Of Full Length Cpcdpk3 (Cgd5_820) In
Complex With Ca2+ And Amppnp
Length = 494
Score = 34.7 bits (78), Expect = 0.015, Method: Composition-based stats.
Identities = 18/79 (22%), Positives = 38/79 (48%), Gaps = 1/79 (1%)
Query: 4 DWWALGVCIYEFVTGVLPFSDETPQKVFDNILANQLEWPEDE-EALNPSTEETILALLKS 62
D W++GV ++ + G PF +T Q++ + + + E + ++ ++ I +L+
Sbjct: 219 DVWSIGVILFILLAGYPPFGGQTDQEILRKVEKGKYTFDSPEWKNVSEGAKDLIKQMLQF 278
Query: 63 DPTQRPSGHQVRRLPMFKD 81
D +R S Q P K+
Sbjct: 279 DSQRRISAQQALEHPWIKE 297
>pdb|1O6Y|A Chain A, Catalytic Domain Of Pknb Kinase From Mycobacterium
Tuberculosis
pdb|2FUM|A Chain A, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|B Chain B, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|C Chain C, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|D Chain D, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
Length = 299
Score = 34.7 bits (78), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 17/65 (26%), Positives = 33/65 (50%), Gaps = 1/65 (1%)
Query: 4 DWWALGVCIYEFVTGVLPFSDETPQKV-FDNILANQLEWPEDEEALNPSTEETILALLKS 62
D ++LG +YE +TG PF+ ++P V + ++ + + E L+ + +L L
Sbjct: 218 DVYSLGCVLYEVLTGEPPFTGDSPVSVAYQHVREDPIPPSARHEGLSADLDAVVLKALAK 277
Query: 63 DPTQR 67
+P R
Sbjct: 278 NPENR 282
>pdb|3ORI|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|B Chain B, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|C Chain C, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|D Chain D, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORK|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 2)
pdb|3ORL|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 3)
pdb|3ORO|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 4)
pdb|3ORP|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 5)
pdb|3ORT|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 6)
Length = 311
Score = 34.3 bits (77), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 17/65 (26%), Positives = 33/65 (50%), Gaps = 1/65 (1%)
Query: 4 DWWALGVCIYEFVTGVLPFSDETPQKV-FDNILANQLEWPEDEEALNPSTEETILALLKS 62
D ++LG +YE +TG PF+ ++P V + ++ + + E L+ + +L L
Sbjct: 201 DVYSLGCVLYEVLTGEPPFTGDSPVSVAYQHVREDPIPPSARHEGLSADLDAVVLKALAK 260
Query: 63 DPTQR 67
+P R
Sbjct: 261 NPENR 265
>pdb|3ORM|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain D76a Mutant
Length = 311
Score = 34.3 bits (77), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 17/65 (26%), Positives = 33/65 (50%), Gaps = 1/65 (1%)
Query: 4 DWWALGVCIYEFVTGVLPFSDETPQKV-FDNILANQLEWPEDEEALNPSTEETILALLKS 62
D ++LG +YE +TG PF+ ++P V + ++ + + E L+ + +L L
Sbjct: 201 DVYSLGCVLYEVLTGEPPFTGDSPVSVAYQHVREDPIPPSARHEGLSADLDAVVLKALAK 260
Query: 63 DPTQR 67
+P R
Sbjct: 261 NPENR 265
>pdb|3F69|A Chain A, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
pdb|3F69|B Chain B, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
Length = 311
Score = 34.3 bits (77), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 17/65 (26%), Positives = 33/65 (50%), Gaps = 1/65 (1%)
Query: 4 DWWALGVCIYEFVTGVLPFSDETPQKV-FDNILANQLEWPEDEEALNPSTEETILALLKS 62
D ++LG +YE +TG PF+ ++P V + ++ + + E L+ + +L L
Sbjct: 201 DVYSLGCVLYEVLTGEPPFTGDSPVSVAYQHVREDPIPPSARHEGLSADLDAVVLKALAK 260
Query: 63 DPTQR 67
+P R
Sbjct: 261 NPENR 265
>pdb|1MRU|A Chain A, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb.
pdb|1MRU|B Chain B, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb
Length = 311
Score = 34.3 bits (77), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 17/65 (26%), Positives = 33/65 (50%), Gaps = 1/65 (1%)
Query: 4 DWWALGVCIYEFVTGVLPFSDETPQKV-FDNILANQLEWPEDEEALNPSTEETILALLKS 62
D ++LG +YE +TG PF+ ++P V + ++ + + E L+ + +L L
Sbjct: 201 DVYSLGCVLYEVLTGEPPFTGDSPVSVAYQHVREDPIPPSARHEGLSADLDAVVLKALAK 260
Query: 63 DPTQR 67
+P R
Sbjct: 261 NPENR 265
>pdb|3DXN|A Chain A, Crystal Structure Of The Calcium-dependent Kinase From
Toxoplasma Gondii, 541.m00134, Kinase Domain
Length = 287
Score = 34.3 bits (77), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 17/75 (22%), Positives = 36/75 (48%), Gaps = 1/75 (1%)
Query: 4 DWWALGVCIYEFVTGVLPFSDETPQKVFDNILANQLEW-PEDEEALNPSTEETILALLKS 62
D W+ GV +Y + G PF +T Q++ + + + P D ++ ++ + +L
Sbjct: 204 DVWSCGVILYILLCGYPPFGGQTDQEILKRVEKGKFSFDPPDWTQVSDEAKQLVKLMLTY 263
Query: 63 DPTQRPSGHQVRRLP 77
+P++R S + P
Sbjct: 264 EPSKRISAEEALNHP 278
>pdb|2XK9|A Chain A, Structural Analysis Of Checkpoint Kinase 2 (Chk2) In
Complex With Inhibitor Pv1533
Length = 322
Score = 34.3 bits (77), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 24/85 (28%), Positives = 41/85 (48%), Gaps = 2/85 (2%)
Query: 2 GVDWWALGVCIYEFVTGVLPFSDETPQ-KVFDNILANQLEW-PEDEEALNPSTEETILAL 59
VD W+LGV ++ ++G PFS+ Q + D I + + + PE ++ + + L
Sbjct: 198 AVDCWSLGVILFICLSGYPPFSEHRTQVSLKDQITSGKYNFIPEVWAEVSEKALDLVKKL 257
Query: 60 LKSDPTQRPSGHQVRRLPMFKDYDW 84
L DP R + + R P +D D
Sbjct: 258 LVVDPKARFTTEEALRHPWLQDEDM 282
>pdb|2YCF|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1531
Length = 322
Score = 34.3 bits (77), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 24/85 (28%), Positives = 41/85 (48%), Gaps = 2/85 (2%)
Query: 2 GVDWWALGVCIYEFVTGVLPFSDETPQ-KVFDNILANQLEW-PEDEEALNPSTEETILAL 59
VD W+LGV ++ ++G PFS+ Q + D I + + + PE ++ + + L
Sbjct: 199 AVDCWSLGVILFICLSGYPPFSEHRTQVSLKDQITSGKYNFIPEVWAEVSEKALDLVKKL 258
Query: 60 LKSDPTQRPSGHQVRRLPMFKDYDW 84
L DP R + + R P +D D
Sbjct: 259 LVVDPKARFTTEEALRHPWLQDEDM 283
>pdb|2YCR|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv976
Length = 323
Score = 34.3 bits (77), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 24/85 (28%), Positives = 41/85 (48%), Gaps = 2/85 (2%)
Query: 2 GVDWWALGVCIYEFVTGVLPFSDETPQ-KVFDNILANQLEW-PEDEEALNPSTEETILAL 59
VD W+LGV ++ ++G PFS+ Q + D I + + + PE ++ + + L
Sbjct: 199 AVDCWSLGVILFICLSGYPPFSEHRTQVSLKDQITSGKYNFIPEVWAEVSEKALDLVKKL 258
Query: 60 LKSDPTQRPSGHQVRRLPMFKDYDW 84
L DP R + + R P +D D
Sbjct: 259 LVVDPKARFTTEEALRHPWLQDEDM 283
>pdb|2W0J|A Chain A, Crystal Structure Of Chk2 In Complex With Nsc 109555, A
Specific Inhibitor
pdb|2W7X|A Chain A, Cellular Inhibition Of Checkpoint Kinase 2 And
Potentiation Of Cytotoxic Drugs By Novel Chk2 Inhibitor
Pv1019
pdb|2YIQ|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1322
pdb|2YIR|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1352
pdb|2YIT|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Pv1162, A Novel Inhibitor
pdb|2YCQ|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1115
pdb|2YCS|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Pv788
Length = 323
Score = 34.3 bits (77), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 24/85 (28%), Positives = 41/85 (48%), Gaps = 2/85 (2%)
Query: 2 GVDWWALGVCIYEFVTGVLPFSDETPQ-KVFDNILANQLEW-PEDEEALNPSTEETILAL 59
VD W+LGV ++ ++G PFS+ Q + D I + + + PE ++ + + L
Sbjct: 199 AVDCWSLGVILFICLSGYPPFSEHRTQVSLKDQITSGKYNFIPEVWAEVSEKALDLVKKL 258
Query: 60 LKSDPTQRPSGHQVRRLPMFKDYDW 84
L DP R + + R P +D D
Sbjct: 259 LVVDPKARFTTEEALRHPWLQDEDM 283
>pdb|2CN5|A Chain A, Crystal Structure Of Human Chk2 In Complex With Adp
pdb|2CN8|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Debromohymenialdisine
pdb|2WTC|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTD|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTI|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTJ|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2XBJ|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2XM8|A Chain A, Co-Crystal Structure Of A Small Molecule Inhibitor Bound
To The Kinase Domain Of Chk2
pdb|2XM9|A Chain A, Structure Of A Small Molecule Inhibitor With The Kinase
Domain Of Chk2
pdb|4A9R|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9S|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9T|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9U|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
Length = 329
Score = 34.3 bits (77), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 24/85 (28%), Positives = 41/85 (48%), Gaps = 2/85 (2%)
Query: 2 GVDWWALGVCIYEFVTGVLPFSDETPQ-KVFDNILANQLEW-PEDEEALNPSTEETILAL 59
VD W+LGV ++ ++G PFS+ Q + D I + + + PE ++ + + L
Sbjct: 205 AVDCWSLGVILFICLSGYPPFSEHRTQVSLKDQITSGKYNFIPEVWAEVSEKALDLVKKL 264
Query: 60 LKSDPTQRPSGHQVRRLPMFKDYDW 84
L DP R + + R P +D D
Sbjct: 265 LVVDPKARFTTEEALRHPWLQDEDM 289
>pdb|2F57|A Chain A, Crystal Structure Of The Human P21-activated Kinase 5
pdb|2F57|B Chain B, Crystal Structure Of The Human P21-activated Kinase 5
Length = 317
Score = 33.1 bits (74), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 18/78 (23%), Positives = 36/78 (46%)
Query: 3 VDWWALGVCIYEFVTGVLPFSDETPQKVFDNILANQLEWPEDEEALNPSTEETILALLKS 62
VD W+LG+ + E + G P+ +E P + I + +D ++ + +L
Sbjct: 222 VDIWSLGIMVIEMIDGEPPYFNEPPLQAMRRIRDSLPPRVKDLHKVSSVLRGFLDLMLVR 281
Query: 63 DPTQRPSGHQVRRLPMFK 80
+P+QR + ++ P K
Sbjct: 282 EPSQRATAQELLGHPFLK 299
>pdb|3COK|A Chain A, Crystal Structure Of Plk4 Kinase
pdb|3COK|B Chain B, Crystal Structure Of Plk4 Kinase
Length = 278
Score = 33.1 bits (74), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 18/66 (27%), Positives = 30/66 (45%), Gaps = 3/66 (4%)
Query: 4 DWWALGVCIYEFVTGVLPFSDETPQKVFDNILANQLEWPEDEEALNPSTEETILALLKSD 63
D W+LG Y + G PF +T + + ++ E P L+ ++ I LL+ +
Sbjct: 194 DVWSLGCMFYTLLIGRPPFDTDTVKNTLNKVVLADYEMP---SFLSIEAKDLIHQLLRRN 250
Query: 64 PTQRPS 69
P R S
Sbjct: 251 PADRLS 256
>pdb|3GOK|A Chain A, Binding Site Mapping Of Protein Ligands
pdb|3GOK|B Chain B, Binding Site Mapping Of Protein Ligands
pdb|3GOK|C Chain C, Binding Site Mapping Of Protein Ligands
pdb|3GOK|D Chain D, Binding Site Mapping Of Protein Ligands
pdb|3GOK|E Chain E, Binding Site Mapping Of Protein Ligands
pdb|3GOK|F Chain F, Binding Site Mapping Of Protein Ligands
pdb|3GOK|G Chain G, Binding Site Mapping Of Protein Ligands
pdb|3GOK|H Chain H, Binding Site Mapping Of Protein Ligands
pdb|3GOK|I Chain I, Binding Site Mapping Of Protein Ligands
pdb|3GOK|J Chain J, Binding Site Mapping Of Protein Ligands
pdb|3GOK|K Chain K, Binding Site Mapping Of Protein Ligands
pdb|3GOK|L Chain L, Binding Site Mapping Of Protein Ligands
Length = 334
Score = 33.1 bits (74), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 22/69 (31%), Positives = 32/69 (46%), Gaps = 5/69 (7%)
Query: 4 DWWALGVCIYEFVTGVLPFSDETPQKVF----DNILANQLEWPEDE-EALNPSTEETILA 58
D W+LGV +Y + G PF + I Q E+P E ++ + I
Sbjct: 215 DMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQYEFPNPEWSEVSEEVKMLIRN 274
Query: 59 LLKSDPTQR 67
LLK++PTQR
Sbjct: 275 LLKTEPTQR 283
>pdb|3FPM|A Chain A, Crystal Structure Of A Squarate Inhibitor Bound To Mapkap
Kinase-2
Length = 325
Score = 33.1 bits (74), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 22/69 (31%), Positives = 32/69 (46%), Gaps = 5/69 (7%)
Query: 4 DWWALGVCIYEFVTGVLPFSDETPQKVF----DNILANQLEWPEDE-EALNPSTEETILA 58
D W+LGV +Y + G PF + I Q E+P E ++ + I
Sbjct: 206 DMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQYEFPNPEWSEVSEEVKMLIRN 265
Query: 59 LLKSDPTQR 67
LLK++PTQR
Sbjct: 266 LLKTEPTQR 274
>pdb|2OZA|A Chain A, Structure Of P38alpha Complex
Length = 356
Score = 33.1 bits (74), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 22/69 (31%), Positives = 32/69 (46%), Gaps = 5/69 (7%)
Query: 4 DWWALGVCIYEFVTGVLPFSDETPQKVF----DNILANQLEWPEDE-EALNPSTEETILA 58
D W+LGV +Y + G PF + I Q E+P E ++ + I
Sbjct: 201 DMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQYEFPNPEWSEVSEEVKMLIRN 260
Query: 59 LLKSDPTQR 67
LLK++PTQR
Sbjct: 261 LLKTEPTQR 269
>pdb|2JBO|A Chain A, Protein Kinase Mk2 In Complex With An Inhibitor (Crystal
Form-1, Soaking)
pdb|2JBP|A Chain A, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|B Chain B, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|C Chain C, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|D Chain D, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|E Chain E, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|F Chain F, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|G Chain G, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|H Chain H, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|I Chain I, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|J Chain J, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|K Chain K, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|L Chain L, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
Length = 326
Score = 33.1 bits (74), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 22/69 (31%), Positives = 32/69 (46%), Gaps = 5/69 (7%)
Query: 4 DWWALGVCIYEFVTGVLPFSDETPQKVF----DNILANQLEWPEDE-EALNPSTEETILA 58
D W+LGV +Y + G PF + I Q E+P E ++ + I
Sbjct: 207 DMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQYEFPNPEWSEVSEEVKMLIRN 266
Query: 59 LLKSDPTQR 67
LLK++PTQR
Sbjct: 267 LLKTEPTQR 275
>pdb|3R2Y|A Chain A, Mk2 Kinase Bound To Compound 1
pdb|3R30|A Chain A, Mk2 Kinase Bound To Compound 2
Length = 319
Score = 33.1 bits (74), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 22/69 (31%), Positives = 32/69 (46%), Gaps = 5/69 (7%)
Query: 4 DWWALGVCIYEFVTGVLPFSDETPQKVF----DNILANQLEWPEDE-EALNPSTEETILA 58
D W+LGV +Y + G PF + I Q E+P E ++ + I
Sbjct: 200 DMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQYEFPNPEWSEVSEEVKMLIRN 259
Query: 59 LLKSDPTQR 67
LLK++PTQR
Sbjct: 260 LLKTEPTQR 268
>pdb|3R2B|A Chain A, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|B Chain B, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|C Chain C, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|D Chain D, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|E Chain E, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|F Chain F, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|G Chain G, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|H Chain H, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|I Chain I, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|J Chain J, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|K Chain K, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|L Chain L, Mk2 Kinase Bound To Compound 5b
Length = 318
Score = 33.1 bits (74), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 22/69 (31%), Positives = 32/69 (46%), Gaps = 5/69 (7%)
Query: 4 DWWALGVCIYEFVTGVLPFSDETPQKVF----DNILANQLEWPEDE-EALNPSTEETILA 58
D W+LGV +Y + G PF + I Q E+P E ++ + I
Sbjct: 199 DMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQYEFPNPEWSEVSEEVKMLIRN 258
Query: 59 LLKSDPTQR 67
LLK++PTQR
Sbjct: 259 LLKTEPTQR 267
>pdb|3GGF|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
pdb|3GGF|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
Length = 301
Score = 33.1 bits (74), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 24/75 (32%), Positives = 33/75 (44%), Gaps = 2/75 (2%)
Query: 1 SGVDWWALGVCIYEFVTGVLPFSDETPQKVFDNILANQLEWPEDEEALNPSTEETILALL 60
S D W+LG+ E G P SD P +V I N P S +E I A L
Sbjct: 199 SKADIWSLGITAIELAKGEPPNSDMHPMRVLFLIPKNN--PPTLVGDFTKSFKEFIDACL 256
Query: 61 KSDPTQRPSGHQVRR 75
DP+ RP+ ++ +
Sbjct: 257 NKDPSFRPTAKELLK 271
>pdb|2PZY|A Chain A, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|B Chain B, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|C Chain C, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|D Chain D, Structure Of Mk2 Complexed With Compound 76
pdb|3KC3|A Chain A, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|B Chain B, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|C Chain C, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|D Chain D, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|E Chain E, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|F Chain F, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|G Chain G, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|H Chain H, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|I Chain I, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|J Chain J, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|K Chain K, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|L Chain L, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3A2C|A Chain A, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|B Chain B, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|C Chain C, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|D Chain D, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|E Chain E, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|F Chain F, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|G Chain G, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|H Chain H, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|I Chain I, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|J Chain J, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|K Chain K, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|L Chain L, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
Length = 324
Score = 33.1 bits (74), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 22/69 (31%), Positives = 32/69 (46%), Gaps = 5/69 (7%)
Query: 4 DWWALGVCIYEFVTGVLPFSDETPQKVF----DNILANQLEWPEDE-EALNPSTEETILA 58
D W+LGV +Y + G PF + I Q E+P E ++ + I
Sbjct: 205 DMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQYEFPNPEWSEVSEEVKMLIRN 264
Query: 59 LLKSDPTQR 67
LLK++PTQR
Sbjct: 265 LLKTEPTQR 273
>pdb|2P3G|X Chain X, Crystal Structure Of A Pyrrolopyridine Inhibitor Bound To
Mapkap Kinase-2
pdb|3FYJ|X Chain X, Crystal Structure Of An Optimzied Benzothiophene Inhibitor
Bound To Mapkap Kinase-2 (Mk-2)
pdb|3FYK|X Chain X, Crystal Structure Of A Benzthiophene Lead Bound To Mapkap
Kinase-2 (Mk-2)
Length = 327
Score = 33.1 bits (74), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 22/69 (31%), Positives = 32/69 (46%), Gaps = 5/69 (7%)
Query: 4 DWWALGVCIYEFVTGVLPFSDETPQKVF----DNILANQLEWPEDE-EALNPSTEETILA 58
D W+LGV +Y + G PF + I Q E+P E ++ + I
Sbjct: 201 DMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQYEFPNPEWSEVSEEVKMLIRN 260
Query: 59 LLKSDPTQR 67
LLK++PTQR
Sbjct: 261 LLKTEPTQR 269
>pdb|3KGA|A Chain A, Crystal Structure Of Mapkap Kinase 2 (Mk2) Complexed With
A Potent 3-Aminopyrazole Atp Site Inhibitor
pdb|3M2W|A Chain A, Crystal Structure Of Mapkak Kinase 2 (Mk2) Complexed With
A Spiroazetidine-Tetracyclic Atp Site Inhibitor
pdb|3M42|A Chain A, Crystal Structure Of Mapkap Kinase 2 (Mk2) Complexed With
A Tetracyclic Atp Site Inhibitor
Length = 299
Score = 33.1 bits (74), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 22/69 (31%), Positives = 32/69 (46%), Gaps = 5/69 (7%)
Query: 4 DWWALGVCIYEFVTGVLPFSDETPQKVF----DNILANQLEWPEDE-EALNPSTEETILA 58
D W+LGV +Y + G PF + I Q E+P E ++ + I
Sbjct: 180 DMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQYEFPNPEWSEVSEEVKMLIRN 239
Query: 59 LLKSDPTQR 67
LLK++PTQR
Sbjct: 240 LLKTEPTQR 248
>pdb|3KA0|A Chain A, Mk2 Complex With Inhibitor
6-(5-(2-Aminopyrimidin-4-Ylamino)-2-
Hydroxyphenyl)-N-Methylbenzo[b]thiophene-2-Carboxamide
Length = 320
Score = 33.1 bits (74), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 22/69 (31%), Positives = 32/69 (46%), Gaps = 5/69 (7%)
Query: 4 DWWALGVCIYEFVTGVLPFSDETPQKVF----DNILANQLEWPEDE-EALNPSTEETILA 58
D W+LGV +Y + G PF + I Q E+P E ++ + I
Sbjct: 199 DMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQYEFPNPEWSEVSEEVKMLIRN 258
Query: 59 LLKSDPTQR 67
LLK++PTQR
Sbjct: 259 LLKTEPTQR 267
>pdb|3KMW|A Chain A, Crystal Structure Of The IlkALPHA-Parvin Core Complex
(Mgatp)
pdb|3REP|A Chain A, Crystal Structure Of The IlkALPHA-Parvin Core Complex
(Mnatp)
Length = 271
Score = 32.7 bits (73), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 16/68 (23%), Positives = 31/68 (45%), Gaps = 1/68 (1%)
Query: 2 GVDWWALGVCIYEFVTGVLPFSDETPQKVFDNILANQLEWPEDEEALNPSTEETILALLK 61
D W+ V ++E VT +PF+D + ++ + L P ++P + + +
Sbjct: 191 SADMWSFAVLLWELVTREVPFADLSNMEIGMKVALEGLR-PTIPPGISPHVSKLMKICMN 249
Query: 62 SDPTQRPS 69
DP +RP
Sbjct: 250 EDPAKRPK 257
>pdb|2C30|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 6
Length = 321
Score = 32.7 bits (73), Expect = 0.053, Method: Compositional matrix adjust.
Identities = 15/71 (21%), Positives = 35/71 (49%)
Query: 3 VDWWALGVCIYEFVTGVLPFSDETPQKVFDNILANQLEWPEDEEALNPSTEETILALLKS 62
VD W+LG+ + E V G P+ ++P + + + ++ ++P + + +L
Sbjct: 222 VDIWSLGIMVIEMVDGEPPYFSDSPVQAMKRLRDSPPPKLKNSHKVSPVLRDFLERMLVR 281
Query: 63 DPTQRPSGHQV 73
DP +R + ++
Sbjct: 282 DPQERATAQEL 292
>pdb|2AC5|A Chain A, Structure Of Human Mnk2 Kinase Domain Mutant D228g
pdb|2HW7|A Chain A, Crystal Structure Of Mnk2-D228g In Complex With
Staurosporine
Length = 316
Score = 32.7 bits (73), Expect = 0.053, Method: Compositional matrix adjust.
Identities = 25/90 (27%), Positives = 43/90 (47%), Gaps = 16/90 (17%)
Query: 4 DWWALGVCIYEFVTGVLPF------------SDETP---QKVFDNILANQLEWPEDEEA- 47
D W+LGV +Y ++G PF + P +F++I + E+P+ + A
Sbjct: 208 DLWSLGVILYILLSGYPPFVGRCGSDCGWDRGEACPACQNMLFESIQEGKYEFPDKDWAH 267
Query: 48 LNPSTEETILALLKSDPTQRPSGHQVRRLP 77
++ + ++ I LL D QR S QV + P
Sbjct: 268 ISCAAKDLISKLLVRDAKQRLSAAQVLQHP 297
>pdb|2AC3|A Chain A, Structure Of Human Mnk2 Kinase Domain
Length = 316
Score = 32.7 bits (73), Expect = 0.056, Method: Compositional matrix adjust.
Identities = 25/90 (27%), Positives = 43/90 (47%), Gaps = 16/90 (17%)
Query: 4 DWWALGVCIYEFVTGVLPF------------SDETP---QKVFDNILANQLEWPEDEEA- 47
D W+LGV +Y ++G PF + P +F++I + E+P+ + A
Sbjct: 208 DLWSLGVILYILLSGYPPFVGRCGSDCGWDRGEACPACQNMLFESIQEGKYEFPDKDWAH 267
Query: 48 LNPSTEETILALLKSDPTQRPSGHQVRRLP 77
++ + ++ I LL D QR S QV + P
Sbjct: 268 ISCAAKDLISKLLVRDAKQRLSAAQVLQHP 297
>pdb|2ONL|C Chain C, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|D Chain D, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
Length = 406
Score = 32.3 bits (72), Expect = 0.065, Method: Composition-based stats.
Identities = 22/69 (31%), Positives = 32/69 (46%), Gaps = 5/69 (7%)
Query: 4 DWWALGVCIYEFVTGVLPFSDETPQKVF----DNILANQLEWPEDE-EALNPSTEETILA 58
D W+LGV +Y + G PF + I Q E+P E ++ + I
Sbjct: 251 DMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQYEFPNPEWSEVSEEVKMLIRN 310
Query: 59 LLKSDPTQR 67
LLK++PTQR
Sbjct: 311 LLKTEPTQR 319
>pdb|2W4O|A Chain A, Crystal Structure Of Human Camk4 In Complex With 4-Amino(
Sulfamoyl-Phenylamino)-Triazole-Carbothioic Acid (2,6-
Difluoro-Phenyl)-Amide)
Length = 349
Score = 32.3 bits (72), Expect = 0.066, Method: Compositional matrix adjust.
Identities = 24/79 (30%), Positives = 39/79 (49%), Gaps = 6/79 (7%)
Query: 3 VDWWALGVCIYEFVTGVLPFSDETP-QKVFDNILANQLEWPE---DEEALNPSTEETILA 58
VD W++G+ Y + G PF DE Q +F IL + + DE +LN ++ +
Sbjct: 231 VDMWSVGIITYILLCGFEPFYDERGDQFMFRRILNCEYYFISPWWDEVSLN--AKDLVRK 288
Query: 59 LLKSDPTQRPSGHQVRRLP 77
L+ DP +R + Q + P
Sbjct: 289 LIVLDPKKRLTTFQALQHP 307
>pdb|1KWP|A Chain A, Crystal Structure Of Mapkap2
pdb|1KWP|B Chain B, Crystal Structure Of Mapkap2
pdb|1NY3|A Chain A, Crystal Structure Of Adp Bound To Map Kap Kinase 2
Length = 400
Score = 32.3 bits (72), Expect = 0.069, Method: Composition-based stats.
Identities = 22/69 (31%), Positives = 32/69 (46%), Gaps = 5/69 (7%)
Query: 4 DWWALGVCIYEFVTGVLPFSDETPQKVF----DNILANQLEWPEDE-EALNPSTEETILA 58
D W+LGV +Y + G PF + I Q E+P E ++ + I
Sbjct: 245 DMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQYEFPNPEWSEVSEEVKMLIRN 304
Query: 59 LLKSDPTQR 67
LLK++PTQR
Sbjct: 305 LLKTEPTQR 313
>pdb|3ALN|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALN|B Chain B, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALN|C Chain C, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALO|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Ternary Complex With Amp-Pnp And P38 Peptide
pdb|3VUT|A Chain A, Crystal Structures Of Non-Phosphorylated Map2k4
pdb|3VUT|B Chain B, Crystal Structures Of Non-Phosphorylated Map2k4
Length = 327
Score = 32.3 bits (72), Expect = 0.069, Method: Compositional matrix adjust.
Identities = 25/92 (27%), Positives = 42/92 (45%), Gaps = 13/92 (14%)
Query: 4 DWWALGVCIYEFVTGVLPFSDETPQ--KVFDNILA------NQLEWPEDEEALNPSTEET 55
D W+LG+ +YE TG P+ P+ VFD + QL E+ E +PS
Sbjct: 211 DVWSLGITLYELATGRFPY----PKWNSVFDQLTQVVKGDPPQLSNSEERE-FSPSFINF 265
Query: 56 ILALLKSDPTQRPSGHQVRRLPMFKDYDWDSI 87
+ L D ++RP ++ + P Y+ ++
Sbjct: 266 VNLCLTKDESKRPKYKELLKHPFILMYEERAV 297
>pdb|2RIO|A Chain A, Structure Of The Dual Enzyme Ire1 Reveals The Basis For
Catalysis And Regulation Of Non-conventional Splicing
pdb|2RIO|B Chain B, Structure Of The Dual Enzyme Ire1 Reveals The Basis For
Catalysis And Regulation Of Non-conventional Splicing
Length = 434
Score = 32.3 bits (72), Expect = 0.070, Method: Compositional matrix adjust.
Identities = 20/83 (24%), Positives = 39/83 (46%), Gaps = 7/83 (8%)
Query: 2 GVDWWALGVCIYEFVT-GVLPFSDETPQKVFDNILANQLEWPE----DEEALNPSTEETI 56
+D +++G Y ++ G PF D+ ++ NI+ E + +L + I
Sbjct: 219 SIDIFSMGCVFYYILSKGKHPFGDKYSRE--SNIIRGIFSLDEMKCLHDRSLIAEATDLI 276
Query: 57 LALLKSDPTQRPSGHQVRRLPMF 79
++ DP +RP+ +V R P+F
Sbjct: 277 SQMIDHDPLKRPTAMKVLRHPLF 299
>pdb|3A7F|A Chain A, Human Mst3 Kinase
pdb|3A7G|A Chain A, Human Mst3 Kinase
pdb|3A7G|B Chain B, Human Mst3 Kinase
pdb|3A7H|A Chain A, Human Mst3 Kinase In Complex With Atp
pdb|3A7H|B Chain B, Human Mst3 Kinase In Complex With Atp
pdb|3A7I|A Chain A, Human Mst3 Kinase In Complex With Adenine
pdb|3A7J|A Chain A, Human Mst3 Kinase In Complex With Mnadp
Length = 303
Score = 32.0 bits (71), Expect = 0.092, Method: Compositional matrix adjust.
Identities = 22/75 (29%), Positives = 34/75 (45%), Gaps = 2/75 (2%)
Query: 1 SGVDWWALGVCIYEFVTGVLPFSDETPQKVFDNILANQLEWPEDEEALNPSTEETILALL 60
S D W+LG+ E G P S+ P KV I N P E + +E + A L
Sbjct: 198 SKADIWSLGITAIELARGEPPHSELHPMKVLFLIPKNN--PPTLEGNYSKPLKEFVEACL 255
Query: 61 KSDPTQRPSGHQVRR 75
+P+ RP+ ++ +
Sbjct: 256 NKEPSFRPTAKELLK 270
>pdb|3ZHP|C Chain C, Human Mst3 (stk24) In Complex With Mo25beta
pdb|3ZHP|D Chain D, Human Mst3 (stk24) In Complex With Mo25beta
Length = 294
Score = 32.0 bits (71), Expect = 0.098, Method: Compositional matrix adjust.
Identities = 22/75 (29%), Positives = 34/75 (45%), Gaps = 2/75 (2%)
Query: 1 SGVDWWALGVCIYEFVTGVLPFSDETPQKVFDNILANQLEWPEDEEALNPSTEETILALL 60
S D W+LG+ E G P S+ P KV I N P E + +E + A L
Sbjct: 203 SKADIWSLGITAIELARGEPPHSELHPMKVLFLIPKNN--PPTLEGNYSKPLKEFVEACL 260
Query: 61 KSDPTQRPSGHQVRR 75
+P+ RP+ ++ +
Sbjct: 261 NKEPSFRPTAKELLK 275
>pdb|3CKX|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24) In Complex With Staurosporine
Length = 304
Score = 32.0 bits (71), Expect = 0.098, Method: Compositional matrix adjust.
Identities = 22/75 (29%), Positives = 34/75 (45%), Gaps = 2/75 (2%)
Query: 1 SGVDWWALGVCIYEFVTGVLPFSDETPQKVFDNILANQLEWPEDEEALNPSTEETILALL 60
S D W+LG+ E G P S+ P KV I N P E + +E + A L
Sbjct: 183 SKADIWSLGITAIELARGEPPHSELHPMKVLFLIPKNN--PPTLEGNYSKPLKEFVEACL 240
Query: 61 KSDPTQRPSGHQVRR 75
+P+ RP+ ++ +
Sbjct: 241 NKEPSFRPTAKELLK 255
>pdb|1NXK|A Chain A, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
pdb|1NXK|B Chain B, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
pdb|1NXK|C Chain C, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
pdb|1NXK|D Chain D, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
Length = 400
Score = 32.0 bits (71), Expect = 0.100, Method: Compositional matrix adjust.
Identities = 22/69 (31%), Positives = 31/69 (44%), Gaps = 5/69 (7%)
Query: 4 DWWALGVCIYEFVTGVLPFSDETPQKVF----DNILANQLEWPEDE-EALNPSTEETILA 58
D W+LGV Y + G PF + I Q E+P E ++ + I
Sbjct: 245 DXWSLGVIXYILLCGYPPFYSNHGLAISPGXKTRIRXGQYEFPNPEWSEVSEEVKXLIRN 304
Query: 59 LLKSDPTQR 67
LLK++PTQR
Sbjct: 305 LLKTEPTQR 313
>pdb|3CKW|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24)
Length = 304
Score = 32.0 bits (71), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 22/75 (29%), Positives = 34/75 (45%), Gaps = 2/75 (2%)
Query: 1 SGVDWWALGVCIYEFVTGVLPFSDETPQKVFDNILANQLEWPEDEEALNPSTEETILALL 60
S D W+LG+ E G P S+ P KV I N P E + +E + A L
Sbjct: 183 SKADIWSLGITAIELARGEPPHSELHPMKVLFLIPKNN--PPTLEGNYSKPLKEFVEACL 240
Query: 61 KSDPTQRPSGHQVRR 75
+P+ RP+ ++ +
Sbjct: 241 NKEPSFRPTAKELLK 255
>pdb|3VW6|A Chain A, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
pdb|3VW6|B Chain B, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
Length = 269
Score = 31.6 bits (70), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 20/66 (30%), Positives = 31/66 (46%), Gaps = 2/66 (3%)
Query: 3 VDWWALGVCIYEFVTGVLPFSD-ETPQKVFDNILANQLEWPEDEEALNPSTEETILALLK 61
D W+LG I E TG PF + PQ + ++ PE E+++ + IL +
Sbjct: 192 ADIWSLGCTIIEMATGKPPFYELGEPQAAMFKVGMFKVH-PEIPESMSAEAKAFILKCFE 250
Query: 62 SDPTQR 67
DP +R
Sbjct: 251 PDPDKR 256
>pdb|2XIK|A Chain A, Structure Of Human Ysk1 (Yeast Sps1-Ste20-Related Kinase
1)
Length = 294
Score = 31.6 bits (70), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 23/80 (28%), Positives = 33/80 (41%), Gaps = 2/80 (2%)
Query: 3 VDWWALGVCIYEFVTGVLPFSDETPQKVFDNILANQLEWPEDEEALNPSTEETILALLKS 62
D W+LG+ E G P SD P +V I N P E + +E + A L
Sbjct: 197 ADIWSLGITAIELAKGEPPNSDLHPMRVLFLIPKNSP--PTLEGQHSKPFKEFVEACLNK 254
Query: 63 DPTQRPSGHQVRRLPMFKDY 82
DP RP+ ++ + Y
Sbjct: 255 DPRFRPTAKELLKHKFITRY 274
>pdb|2CLQ|A Chain A, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
pdb|2CLQ|B Chain B, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
Length = 295
Score = 31.2 bits (69), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 20/66 (30%), Positives = 31/66 (46%), Gaps = 2/66 (3%)
Query: 3 VDWWALGVCIYEFVTGVLPFSD-ETPQKVFDNILANQLEWPEDEEALNPSTEETILALLK 61
D W+LG I E TG PF + PQ + ++ PE E+++ + IL +
Sbjct: 206 ADIWSLGCTIIEMATGKPPFYELGEPQAAMFKVGMFKVH-PEIPESMSAEAKAFILKCFE 264
Query: 62 SDPTQR 67
DP +R
Sbjct: 265 PDPDKR 270
>pdb|2IWI|A Chain A, Crystal Structure Of The Human Pim2 In Complex With A
Ruthenium Organometallic Ligand Ru1
pdb|2IWI|B Chain B, Crystal Structure Of The Human Pim2 In Complex With A
Ruthenium Organometallic Ligand Ru1
Length = 312
Score = 31.2 bits (69), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 19/68 (27%), Positives = 32/68 (47%), Gaps = 9/68 (13%)
Query: 6 WALGVCIYEFVTGVLPFSDETPQKVFDNILANQLEWPEDEEALNPSTEETILALLKSDPT 65
W+LG+ +Y+ V G +PF + IL +L +P ++P I L P+
Sbjct: 223 WSLGILLYDMVCGDIPFERD------QEILEAELHFPAH---VSPDCCALIRRCLAPKPS 273
Query: 66 QRPSGHQV 73
RPS ++
Sbjct: 274 SRPSLEEI 281
>pdb|3DTC|A Chain A, Crystal Structure Of Mixed-Lineage Kinase Mlk1 Complexed
With Compound 16
Length = 271
Score = 30.8 bits (68), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 24/74 (32%), Positives = 31/74 (41%), Gaps = 11/74 (14%)
Query: 1 SGVDWWALGVCIYEFVTGVLPFSDETPQKVFDNILANQLEWPEDEEALNPSTEETILALL 60
G D W+ GV ++E +TG +PF V + N+L P PST A L
Sbjct: 193 KGSDVWSYGVLLWELLTGEVPFRGIDGLAVAYGVAMNKLALP------IPSTCPEPFAKL 246
Query: 61 KS-----DPTQRPS 69
DP RPS
Sbjct: 247 MEDCWNPDPHSRPS 260
>pdb|3P23|A Chain A, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|B Chain B, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|C Chain C, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|D Chain D, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
Length = 432
Score = 30.4 bits (67), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 20/78 (25%), Positives = 34/78 (43%), Gaps = 1/78 (1%)
Query: 3 VDWWALGVCIYEFVT-GVLPFSDETPQKVFDNILANQLEWPEDEEALNPSTEETILALLK 61
VD ++ G Y ++ G PF ++ + A L+ E+ + E I ++
Sbjct: 210 VDIFSAGCVFYYVISEGSHPFGKSLQRQANILLGACSLDCLHPEKHEDVIARELIEKMIA 269
Query: 62 SDPTQRPSGHQVRRLPMF 79
DP +RPS V + P F
Sbjct: 270 MDPQKRPSAKHVLKHPFF 287
>pdb|3FXZ|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Lambda-Fl172
pdb|3FY0|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Dw1
pdb|4DAW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With The Ruthenium
Phthalimide Complex
Length = 297
Score = 30.4 bits (67), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 18/71 (25%), Positives = 33/71 (46%)
Query: 3 VDWWALGVCIYEFVTGVLPFSDETPQKVFDNILANQLEWPEDEEALNPSTEETILALLKS 62
VD W+LG+ E + G P+ +E P + I N ++ E L+ + + L+
Sbjct: 197 VDIWSLGIMAIEMIEGEPPYLNENPLRALYLIATNGTPELQNPEKLSAIFRDFLNRCLEM 256
Query: 63 DPTQRPSGHQV 73
D +R S ++
Sbjct: 257 DVEKRGSAKEL 267
>pdb|3Q4Z|A Chain A, Structure Of Unphosphorylated Pak1 Kinase Domain
pdb|3Q4Z|B Chain B, Structure Of Unphosphorylated Pak1 Kinase Domain
Length = 306
Score = 30.4 bits (67), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 18/71 (25%), Positives = 33/71 (46%)
Query: 3 VDWWALGVCIYEFVTGVLPFSDETPQKVFDNILANQLEWPEDEEALNPSTEETILALLKS 62
VD W+LG+ E + G P+ +E P + I N ++ E L+ + + L+
Sbjct: 198 VDIWSLGIMAIEMIEGEPPYLNENPLRALYLIATNGTPELQNPEKLSAIFRDFLNRCLEM 257
Query: 63 DPTQRPSGHQV 73
D +R S ++
Sbjct: 258 DVEKRGSAKEL 268
>pdb|3Q52|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain
pdb|3Q53|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain In Complex
With Atp
Length = 306
Score = 30.4 bits (67), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 18/71 (25%), Positives = 33/71 (46%)
Query: 3 VDWWALGVCIYEFVTGVLPFSDETPQKVFDNILANQLEWPEDEEALNPSTEETILALLKS 62
VD W+LG+ E + G P+ +E P + I N ++ E L+ + + L+
Sbjct: 198 VDIWSLGIMAIEMIEGEPPYLNENPLRALYLIATNGTPELQNPEKLSAIFRDFLNRCLEM 257
Query: 63 DPTQRPSGHQV 73
D +R S ++
Sbjct: 258 DVEKRGSAKEL 268
>pdb|3II5|A Chain A, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
pdb|3II5|B Chain B, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
Length = 306
Score = 30.4 bits (67), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 21/85 (24%), Positives = 33/85 (38%), Gaps = 24/85 (28%)
Query: 4 DWWALGVCIYEFVTGVLPFSDETPQ------------------------KVFDNILANQL 39
D +A G+ +YE +TG LP+S+ + K ++A L
Sbjct: 218 DVYAFGIVLYELMTGQLPYSNINNRDQIIFMVGRGYLSPDLSKVRSNCPKAMKRLMAECL 277
Query: 40 EWPEDEEALNPSTEETILALLKSDP 64
+ DE L P +I L +S P
Sbjct: 278 KKKRDERPLFPQILASIELLARSLP 302
>pdb|3IDP|A Chain A, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
pdb|3IDP|B Chain B, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
Length = 300
Score = 30.4 bits (67), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 21/85 (24%), Positives = 33/85 (38%), Gaps = 24/85 (28%)
Query: 4 DWWALGVCIYEFVTGVLPFSDETPQ------------------------KVFDNILANQL 39
D +A G+ +YE +TG LP+S+ + K ++A L
Sbjct: 211 DVYAFGIVLYELMTGQLPYSNINNRDQIIFMVGRGYLSPDLSKVRSNCPKAMKRLMAECL 270
Query: 40 EWPEDEEALNPSTEETILALLKSDP 64
+ DE L P +I L +S P
Sbjct: 271 KKKRDERPLFPQILASIELLARSLP 295
>pdb|3D4Q|A Chain A, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3D4Q|B Chain B, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3PSB|A Chain A, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PSB|B Chain B, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PPJ|A Chain A, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPJ|B Chain B, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPK|A Chain A, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PPK|B Chain B, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PRF|A Chain A, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRF|B Chain B, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRI|A Chain A, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3PRI|B Chain B, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3Q4C|A Chain A, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3Q4C|B Chain B, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3PSD|A Chain A, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3PSD|B Chain B, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3SKC|A Chain A, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3SKC|B Chain B, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3TV4|A Chain A, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV4|B Chain B, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV6|A Chain A, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|3TV6|B Chain B, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|4E26|A Chain A, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E26|B Chain B, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E4X|A Chain A, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4E4X|B Chain B, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4G9C|A Chain A, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
pdb|4G9C|B Chain B, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
Length = 307
Score = 30.0 bits (66), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 21/85 (24%), Positives = 33/85 (38%), Gaps = 24/85 (28%)
Query: 4 DWWALGVCIYEFVTGVLPFSDETPQ------------------------KVFDNILANQL 39
D +A G+ +YE +TG LP+S+ + K ++A L
Sbjct: 219 DVYAFGIVLYELMTGQLPYSNINNRDQIIFMVGRGYLSPDLSKVRSNCPKAMKRLMAECL 278
Query: 40 EWPEDEEALNPSTEETILALLKSDP 64
+ DE L P +I L +S P
Sbjct: 279 KKKRDERPLFPQILASIELLARSLP 303
>pdb|4G9R|A Chain A, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
pdb|4G9R|B Chain B, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
Length = 307
Score = 30.0 bits (66), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 21/85 (24%), Positives = 33/85 (38%), Gaps = 24/85 (28%)
Query: 4 DWWALGVCIYEFVTGVLPFSDETPQ------------------------KVFDNILANQL 39
D +A G+ +YE +TG LP+S+ + K ++A L
Sbjct: 219 DVYAFGIVLYELMTGQLPYSNINNRDQIIFMVGRGYLSPDLSKVRSNCPKAMKRLMAECL 278
Query: 40 EWPEDEEALNPSTEETILALLKSDP 64
+ DE L P +I L +S P
Sbjct: 279 KKKRDERPLFPQILASIELLARSLP 303
>pdb|4AS0|A Chain A, Cyclometalated Phthalimides As Protein Kinase Inhibitors
Length = 273
Score = 30.0 bits (66), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 17/76 (22%), Positives = 37/76 (48%), Gaps = 9/76 (11%)
Query: 6 WALGVCIYEFVTGVLPFSDETPQKVFDNILANQLEWPEDEEALNPSTEETILALLKSDPT 65
W+LG+ +Y+ V G +PF + + I+ Q+ + + ++ + I L P+
Sbjct: 194 WSLGILLYDMVCGDIPFEHD------EEIIGGQVFF---RQRVSSECQHLIRWCLALRPS 244
Query: 66 QRPSGHQVRRLPMFKD 81
RP+ +++ P +D
Sbjct: 245 DRPTFEEIQNHPWMQD 260
>pdb|3Q96|A Chain A, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
pdb|3Q96|B Chain B, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
Length = 282
Score = 30.0 bits (66), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 21/85 (24%), Positives = 33/85 (38%), Gaps = 24/85 (28%)
Query: 4 DWWALGVCIYEFVTGVLPFSDETPQ------------------------KVFDNILANQL 39
D +A G+ +YE +TG LP+S+ + K ++A L
Sbjct: 193 DVYAFGIVLYELMTGQLPYSNINNRDQIIFMVGRGYLSPDLSKVRSNCPKAMKRLMAECL 252
Query: 40 EWPEDEEALNPSTEETILALLKSDP 64
+ DE L P +I L +S P
Sbjct: 253 KKKRDERPLFPQILASIELLARSLP 277
>pdb|3FBV|A Chain A, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|B Chain B, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|C Chain C, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|D Chain D, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|E Chain E, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|F Chain F, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|G Chain G, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|H Chain H, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|I Chain I, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|J Chain J, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|K Chain K, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|L Chain L, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|M Chain M, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|N Chain N, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3SDM|A Chain A, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|B Chain B, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|C Chain C, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|D Chain D, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|E Chain E, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|F Chain F, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|G Chain G, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
Length = 448
Score = 30.0 bits (66), Expect = 0.34, Method: Composition-based stats.
Identities = 20/82 (24%), Positives = 39/82 (47%), Gaps = 7/82 (8%)
Query: 3 VDWWALGVCIYEFVT-GVLPFSDETPQKVFDNILANQLEWPE----DEEALNPSTEETIL 57
+D +++G Y ++ G PF D+ ++ NI+ E + +L + I
Sbjct: 234 IDIFSMGCVFYYILSKGKHPFGDKYSRE--SNIIRGIFSLDEMKCLHDRSLIAEATDLIS 291
Query: 58 ALLKSDPTQRPSGHQVRRLPMF 79
++ DP +RP+ +V R P+F
Sbjct: 292 QMIDHDPLKRPTAMKVLRHPLF 313
>pdb|3KMU|A Chain A, Crystal Structure Of The IlkALPHA-Parvin Core Complex
(Apo)
Length = 271
Score = 30.0 bits (66), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 16/67 (23%), Positives = 29/67 (43%), Gaps = 1/67 (1%)
Query: 3 VDWWALGVCIYEFVTGVLPFSDETPQKVFDNILANQLEWPEDEEALNPSTEETILALLKS 62
D W+ V ++E VT +PF+D + ++ + L P ++P +
Sbjct: 192 ADXWSFAVLLWELVTREVPFADLSNXEIGXKVALEGLR-PTIPPGISPHVSKLXKICXNE 250
Query: 63 DPTQRPS 69
DP +RP
Sbjct: 251 DPAKRPK 257
>pdb|4DBN|A Chain A, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
pdb|4DBN|B Chain B, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 284
Score = 30.0 bits (66), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 21/85 (24%), Positives = 33/85 (38%), Gaps = 24/85 (28%)
Query: 4 DWWALGVCIYEFVTGVLPFSDETPQ------------------------KVFDNILANQL 39
D +A G+ +YE +TG LP+S+ + K ++A L
Sbjct: 196 DVYAFGIVLYELMTGQLPYSNINNRDQIIFMVGRGYLSPDLSKVRSNCPKAMKRLMAECL 255
Query: 40 EWPEDEEALNPSTEETILALLKSDP 64
+ DE L P +I L +S P
Sbjct: 256 KKKRDERPLFPQILASIELLARSLP 280
>pdb|3SDJ|A Chain A, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|B Chain B, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|C Chain C, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|D Chain D, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|E Chain E, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|F Chain F, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|G Chain G, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|H Chain H, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|I Chain I, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|J Chain J, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|K Chain K, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|L Chain L, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|M Chain M, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|N Chain N, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
Length = 448
Score = 30.0 bits (66), Expect = 0.36, Method: Composition-based stats.
Identities = 20/83 (24%), Positives = 41/83 (49%), Gaps = 9/83 (10%)
Query: 3 VDWWALGVCIYEFV--TGVLPFSDETPQKVFDNILANQLEWPE----DEEALNPSTEETI 56
+D +++G C++ ++ G PF D+ ++ NI+ E + +L + I
Sbjct: 234 IDIFSMG-CVFYYILSKGKHPFGDKYSRE--SNIIRGIFSLDEMKCLHDRSLIAEATDLI 290
Query: 57 LALLKSDPTQRPSGHQVRRLPMF 79
++ DP +RP+ +V R P+F
Sbjct: 291 SQMIDHDPLKRPTAMKVLRHPLF 313
>pdb|4FK3|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
pdb|4FK3|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
Length = 292
Score = 30.0 bits (66), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 10/21 (47%), Positives = 16/21 (76%)
Query: 4 DWWALGVCIYEFVTGVLPFSD 24
D +A G+ +YE +TG LP+S+
Sbjct: 207 DVYAFGIVLYELMTGQLPYSN 227
>pdb|3OG7|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
pdb|3OG7|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
Length = 289
Score = 30.0 bits (66), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 10/21 (47%), Positives = 16/21 (76%)
Query: 4 DWWALGVCIYEFVTGVLPFSD 24
D +A G+ +YE +TG LP+S+
Sbjct: 207 DVYAFGIVLYELMTGQLPYSN 227
>pdb|4H58|A Chain A, Braf In Complex With Compound 3
pdb|4H58|B Chain B, Braf In Complex With Compound 3
pdb|4H58|C Chain C, Braf In Complex With Compound 3
Length = 275
Score = 30.0 bits (66), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 21/85 (24%), Positives = 33/85 (38%), Gaps = 24/85 (28%)
Query: 4 DWWALGVCIYEFVTGVLPFSDETPQ------------------------KVFDNILANQL 39
D +A G+ +YE +TG LP+S+ + K ++A L
Sbjct: 191 DVYAFGIVLYELMTGQLPYSNINNRDQIIFMVGRGYLSPDLSKVRSNCPKAMKRLMAECL 250
Query: 40 EWPEDEEALNPSTEETILALLKSDP 64
+ DE L P +I L +S P
Sbjct: 251 KKKRDERPLFPQILASIELLARSLP 275
>pdb|2FB8|A Chain A, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
pdb|2FB8|B Chain B, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
Length = 281
Score = 30.0 bits (66), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 21/85 (24%), Positives = 33/85 (38%), Gaps = 24/85 (28%)
Query: 4 DWWALGVCIYEFVTGVLPFSDETPQ------------------------KVFDNILANQL 39
D +A G+ +YE +TG LP+S+ + K ++A L
Sbjct: 196 DVYAFGIVLYELMTGQLPYSNINNRDQIIFMVGRGYLSPDLSKVRSNCPKAMKRLMAECL 255
Query: 40 EWPEDEEALNPSTEETILALLKSDP 64
+ DE L P +I L +S P
Sbjct: 256 KKKRDERPLFPQILASIELLARSLP 280
>pdb|1DL2|A Chain A, Crystal Structure Of Class I Alpha-1,2-Mannosidase From
Saccharomyces Cerevisiae At 1.54 Angstrom Resolution
Length = 511
Score = 30.0 bits (66), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 13/28 (46%), Positives = 15/28 (53%)
Query: 58 ALLKSDPTQRPSGHQVRRLPMFKDYDWD 85
LL S T+ S H+ RR P F DWD
Sbjct: 311 GLLASGSTEGLSIHEARRRPFFSKSDWD 338
>pdb|1UWH|A Chain A, The Complex Of Wild Type B-Raf And Bay439006
pdb|1UWH|B Chain B, The Complex Of Wild Type B-Raf And Bay439006
Length = 276
Score = 30.0 bits (66), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 21/85 (24%), Positives = 33/85 (38%), Gaps = 24/85 (28%)
Query: 4 DWWALGVCIYEFVTGVLPFSDETPQ------------------------KVFDNILANQL 39
D +A G+ +YE +TG LP+S+ + K ++A L
Sbjct: 191 DVYAFGIVLYELMTGQLPYSNINNRDQIIFMVGRGYLSPDLSKVRSNCPKAMKRLMAECL 250
Query: 40 EWPEDEEALNPSTEETILALLKSDP 64
+ DE L P +I L +S P
Sbjct: 251 KKKRDERPLFPQILASIELLARSLP 275
>pdb|3C4C|A Chain A, B-Raf Kinase In Complex With Plx4720
pdb|3C4C|B Chain B, B-Raf Kinase In Complex With Plx4720
Length = 280
Score = 30.0 bits (66), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 10/21 (47%), Positives = 16/21 (76%)
Query: 4 DWWALGVCIYEFVTGVLPFSD 24
D +A G+ +YE +TG LP+S+
Sbjct: 195 DVYAFGIVLYELMTGQLPYSN 215
>pdb|1F3M|C Chain C, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1F3M|D Chain D, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1YHW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With One Point
Mutations (K299r)
Length = 297
Score = 30.0 bits (66), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 16/49 (32%), Positives = 25/49 (51%), Gaps = 3/49 (6%)
Query: 3 VDWWALGVCIYEFVTGVLPFSDETPQKVFDNILAN---QLEWPEDEEAL 48
VD W+LG+ E + G P+ +E P + I N +L+ PE A+
Sbjct: 197 VDIWSLGIMAIEMIEGEPPYLNENPLRALYLIATNGTPELQNPEKLSAI 245
>pdb|2J2I|B Chain B, Crystal Structure Of The Humab Pim1 In Complex With
Ly333531
Length = 312
Score = 30.0 bits (66), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 17/76 (22%), Positives = 37/76 (48%), Gaps = 9/76 (11%)
Query: 6 WALGVCIYEFVTGVLPFSDETPQKVFDNILANQLEWPEDEEALNPSTEETILALLKSDPT 65
W+LG+ +Y+ V G +PF + + I+ Q+ + + ++ + I L P+
Sbjct: 226 WSLGILLYDMVCGDIPFEHD------EEIIGGQVFF---RQRVSSECQHLIRWCLALRPS 276
Query: 66 QRPSGHQVRRLPMFKD 81
RP+ +++ P +D
Sbjct: 277 DRPTFEEIQNHPWMQD 292
>pdb|2BIL|B Chain B, The Human Protein Kinase Pim1 In Complex With Its
Consensus Peptide Pimtide
pdb|2BZJ|A Chain A, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru3
pdb|2BZK|B Chain B, Crystal Structure Of The Human Pim1 In Complex With Amppnp
And Pimtide
pdb|2C3I|B Chain B, Crystal Structure Of Human Pim1 In Complex With
Imidazopyridazin I
pdb|2BZH|B Chain B, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru1
pdb|2OI4|X Chain X, Crystal Structure Of Human Pim1 In Complex With
Fluorinated Ruthenium Pyridocarbazole
pdb|3BWF|A Chain A, Crystal Structure Of The Human Pim1 In Complex With An
Osmium Compound
Length = 313
Score = 30.0 bits (66), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 17/76 (22%), Positives = 37/76 (48%), Gaps = 9/76 (11%)
Query: 6 WALGVCIYEFVTGVLPFSDETPQKVFDNILANQLEWPEDEEALNPSTEETILALLKSDPT 65
W+LG+ +Y+ V G +PF + + I+ Q+ + + ++ + I L P+
Sbjct: 226 WSLGILLYDMVCGDIPFEHD------EEIIGGQVFF---RQRVSSECQHLIRWCLALRPS 276
Query: 66 QRPSGHQVRRLPMFKD 81
RP+ +++ P +D
Sbjct: 277 DRPTFEEIQNHPWMQD 292
>pdb|1UWJ|A Chain A, The Complex Of Mutant V599e B-raf And Bay439006
pdb|1UWJ|B Chain B, The Complex Of Mutant V599e B-raf And Bay439006
Length = 276
Score = 29.6 bits (65), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 21/85 (24%), Positives = 33/85 (38%), Gaps = 24/85 (28%)
Query: 4 DWWALGVCIYEFVTGVLPFSDETPQ------------------------KVFDNILANQL 39
D +A G+ +YE +TG LP+S+ + K ++A L
Sbjct: 191 DVYAFGIVLYELMTGQLPYSNINNRDQIIFMVGRGYLSPDLSKVRSNCPKAMKRLMAECL 250
Query: 40 EWPEDEEALNPSTEETILALLKSDP 64
+ DE L P +I L +S P
Sbjct: 251 KKKRDERPLFPQILASIELLARSLP 275
>pdb|3CXW|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Beta Carboline Ligand I
pdb|3CY2|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Beta Carboline Ligand Ii
Length = 314
Score = 29.6 bits (65), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 17/76 (22%), Positives = 37/76 (48%), Gaps = 9/76 (11%)
Query: 6 WALGVCIYEFVTGVLPFSDETPQKVFDNILANQLEWPEDEEALNPSTEETILALLKSDPT 65
W+LG+ +Y+ V G +PF + + I+ Q+ + + ++ + I L P+
Sbjct: 227 WSLGILLYDMVCGDIPFEHD------EEIIGGQVFF---RQRVSSECQHLIRWCLALRPS 277
Query: 66 QRPSGHQVRRLPMFKD 81
RP+ +++ P +D
Sbjct: 278 DRPTFEEIQNHPWMQD 293
>pdb|1YHV|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Two Point
Mutations (K299r, T423e)
pdb|2HY8|1 Chain 1, Pak1 Complex With St2001
Length = 297
Score = 29.6 bits (65), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 16/49 (32%), Positives = 25/49 (51%), Gaps = 3/49 (6%)
Query: 3 VDWWALGVCIYEFVTGVLPFSDETPQKVFDNILAN---QLEWPEDEEAL 48
VD W+LG+ E + G P+ +E P + I N +L+ PE A+
Sbjct: 197 VDIWSLGIMAIEMIEGEPPYLNENPLRALYLIATNGTPELQNPEKLSAI 245
>pdb|3JPV|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Pyrrolo[2,3- A]carbazole Ligand
pdb|3QF9|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Furan- Thiazolidinedione Ligand
pdb|4GW8|A Chain A, Human Proto-Oncogene Serine Threonine Kinase (Pim1) In
Complex With A Consensus Peptide And Leucettine L41
Length = 313
Score = 29.6 bits (65), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 17/76 (22%), Positives = 37/76 (48%), Gaps = 9/76 (11%)
Query: 6 WALGVCIYEFVTGVLPFSDETPQKVFDNILANQLEWPEDEEALNPSTEETILALLKSDPT 65
W+LG+ +Y+ V G +PF + + I+ Q+ + + ++ + I L P+
Sbjct: 227 WSLGILLYDMVCGDIPFEHD------EEIIGGQVFF---RQRVSSECQHLIRWCLALRPS 277
Query: 66 QRPSGHQVRRLPMFKD 81
RP+ +++ P +D
Sbjct: 278 DRPTFEEIQNHPWMQD 293
>pdb|1G6I|A Chain A, Crystal Structure Of The Yeast Alpha-1,2-Mannosidase With
Bound 1- Deoxymannojirimycin At 1.59 A Resolution
Length = 545
Score = 29.6 bits (65), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 13/28 (46%), Positives = 15/28 (53%)
Query: 58 ALLKSDPTQRPSGHQVRRLPMFKDYDWD 85
LL S T+ S H+ RR P F DWD
Sbjct: 345 GLLASGSTEGLSIHEARRRPFFSKSDWD 372
>pdb|4EUT|A Chain A, Structure Of Bx-795 Complexed With Unphosphorylated Human
Tbk1 Kinase- Uld Domain
pdb|4EUT|B Chain B, Structure Of Bx-795 Complexed With Unphosphorylated Human
Tbk1 Kinase- Uld Domain
Length = 396
Score = 29.6 bits (65), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 13/28 (46%), Positives = 17/28 (60%), Gaps = 1/28 (3%)
Query: 3 VDWWALGVCIYEFVTGVLPFSD-ETPQK 29
VD W++GV Y TG LPF E P++
Sbjct: 204 VDLWSIGVTFYHAATGSLPFRPFEGPRR 231
>pdb|2BIK|B Chain B, Human Pim1 Phosphorylated On Ser261
pdb|2BZI|B Chain B, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru2
Length = 313
Score = 29.6 bits (65), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 17/76 (22%), Positives = 37/76 (48%), Gaps = 9/76 (11%)
Query: 6 WALGVCIYEFVTGVLPFSDETPQKVFDNILANQLEWPEDEEALNPSTEETILALLKSDPT 65
W+LG+ +Y+ V G +PF + + I+ Q+ + + ++ + I L P+
Sbjct: 226 WSLGILLYDMVCGDIPFEHD------EEIIGGQVFF---RQRVSXECQHLIRWCLALRPS 276
Query: 66 QRPSGHQVRRLPMFKD 81
RP+ +++ P +D
Sbjct: 277 DRPTFEEIQNHPWMQD 292
>pdb|1MP8|A Chain A, Crystal Structure Of Focal Adhesion Kinase (Fak)
pdb|4I4F|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With An Allosteric Binding Pyrazolobenzothiazine
Compound
Length = 281
Score = 29.6 bits (65), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 23/73 (31%), Positives = 37/73 (50%), Gaps = 11/73 (15%)
Query: 1 SGVDWWALGVCIYEFVT-GVLPFSDETPQKVFDNILANQLEWPEDEEALNPSTEETILAL 59
S D W GVC++E + GV PF Q V +N + ++E E + P+ T+ +L
Sbjct: 196 SASDVWMFGVCMWEILMHGVKPF-----QGVKNNDVIGRIENGE-RLPMPPNCPPTLYSL 249
Query: 60 LKS----DPTQRP 68
+ DP++RP
Sbjct: 250 MTKCWAYDPSRRP 262
>pdb|3MA3|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Naphtho-Difuran Ligand
Length = 313
Score = 29.6 bits (65), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 17/76 (22%), Positives = 37/76 (48%), Gaps = 9/76 (11%)
Query: 6 WALGVCIYEFVTGVLPFSDETPQKVFDNILANQLEWPEDEEALNPSTEETILALLKSDPT 65
W+LG+ +Y+ V G +PF + + I+ Q+ + + ++ + I L P+
Sbjct: 227 WSLGILLYDMVCGDIPFEHD------EEIIGGQVFF---RQRVSXECQHLIRWCLALRPS 277
Query: 66 QRPSGHQVRRLPMFKD 81
RP+ +++ P +D
Sbjct: 278 DRPTFEEIQNHPWMQD 293
>pdb|3LJ0|A Chain A, Ire1 Complexed With Adp And Quercetin
pdb|3LJ0|B Chain B, Ire1 Complexed With Adp And Quercetin
pdb|3LJ1|A Chain A, Ire1 Complexed With Cdk12 INHIBITOR III
pdb|3LJ1|B Chain B, Ire1 Complexed With Cdk12 INHIBITOR III
pdb|3LJ2|A Chain A, Ire1 Complexed With Jak Inhibitor I
pdb|3LJ2|B Chain B, Ire1 Complexed With Jak Inhibitor I
Length = 434
Score = 29.6 bits (65), Expect = 0.45, Method: Composition-based stats.
Identities = 20/82 (24%), Positives = 39/82 (47%), Gaps = 7/82 (8%)
Query: 3 VDWWALGVCIYEFVT-GVLPFSDETPQKVFDNILANQLEWPE----DEEALNPSTEETIL 57
+D +++G Y ++ G PF D+ ++ NI+ E + +L + I
Sbjct: 220 IDIFSMGCVFYYILSKGKHPFGDKYSRE--SNIIRGIFSLDEMKCLHDRSLIAEATDLIS 277
Query: 58 ALLKSDPTQRPSGHQVRRLPMF 79
++ DP +RP+ +V R P+F
Sbjct: 278 QMIDHDPLKRPTAMKVLRHPLF 299
>pdb|3CY3|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And
The Jnk Inhibitor V
Length = 314
Score = 29.6 bits (65), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 17/76 (22%), Positives = 37/76 (48%), Gaps = 9/76 (11%)
Query: 6 WALGVCIYEFVTGVLPFSDETPQKVFDNILANQLEWPEDEEALNPSTEETILALLKSDPT 65
W+LG+ +Y+ V G +PF + + I+ Q+ + + ++ + I L P+
Sbjct: 227 WSLGILLYDMVCGDIPFEHD------EEIIGGQVFF---RQRVSXECQHLIRWCLALRPS 277
Query: 66 QRPSGHQVRRLPMFKD 81
RP+ +++ P +D
Sbjct: 278 DRPTFEEIQNHPWMQD 293
>pdb|2J0L|A Chain A, Crystal Structure Of A The Active Conformation Of The
Kinase Domain Of Focal Adhesion Kinase With A
Phosphorylated Activation Loop
Length = 276
Score = 29.6 bits (65), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 23/73 (31%), Positives = 37/73 (50%), Gaps = 11/73 (15%)
Query: 1 SGVDWWALGVCIYEFVT-GVLPFSDETPQKVFDNILANQLEWPEDEEALNPSTEETILAL 59
S D W GVC++E + GV PF Q V +N + ++E E + P+ T+ +L
Sbjct: 191 SASDVWMFGVCMWEILMHGVKPF-----QGVKNNDVIGRIENGE-RLPMPPNCPPTLYSL 244
Query: 60 LKS----DPTQRP 68
+ DP++RP
Sbjct: 245 MTKCWAYDPSRRP 257
>pdb|2ETM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain
Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2ETM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain
Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2IJM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
pdb|2IJM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
Length = 281
Score = 29.6 bits (65), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 23/73 (31%), Positives = 37/73 (50%), Gaps = 11/73 (15%)
Query: 1 SGVDWWALGVCIYEFVT-GVLPFSDETPQKVFDNILANQLEWPEDEEALNPSTEETILAL 59
S D W GVC++E + GV PF Q V +N + ++E E + P+ T+ +L
Sbjct: 193 SASDVWMFGVCMWEILMHGVKPF-----QGVKNNDVIGRIENGE-RLPMPPNCPPTLYSL 246
Query: 60 LKS----DPTQRP 68
+ DP++RP
Sbjct: 247 MTKCWAYDPSRRP 259
>pdb|4EBW|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
pdb|4EBV|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
Length = 304
Score = 29.6 bits (65), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 23/73 (31%), Positives = 37/73 (50%), Gaps = 11/73 (15%)
Query: 1 SGVDWWALGVCIYEFVT-GVLPFSDETPQKVFDNILANQLEWPEDEEALNPSTEETILAL 59
S D W GVC++E + GV PF Q V +N + ++E E + P+ T+ +L
Sbjct: 219 SASDVWMFGVCMWEILMHGVKPF-----QGVKNNDVIGRIENGE-RLPMPPNCPPTLYSL 272
Query: 60 LKS----DPTQRP 68
+ DP++RP
Sbjct: 273 MTKCWAYDPSRRP 285
>pdb|3PXK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
pdb|3PXK|B Chain B, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
Length = 282
Score = 29.6 bits (65), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 23/73 (31%), Positives = 37/73 (50%), Gaps = 11/73 (15%)
Query: 1 SGVDWWALGVCIYEFVT-GVLPFSDETPQKVFDNILANQLEWPEDEEALNPSTEETILAL 59
S D W GVC++E + GV PF Q V +N + ++E E + P+ T+ +L
Sbjct: 194 SASDVWMFGVCMWEILMHGVKPF-----QGVKNNDVIGRIENGE-RLPMPPNCPPTLYSL 247
Query: 60 LKS----DPTQRP 68
+ DP++RP
Sbjct: 248 MTKCWAYDPSRRP 260
>pdb|2JKM|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 29.6 bits (65), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 23/73 (31%), Positives = 37/73 (50%), Gaps = 11/73 (15%)
Query: 1 SGVDWWALGVCIYEFVT-GVLPFSDETPQKVFDNILANQLEWPEDEEALNPSTEETILAL 59
S D W GVC++E + GV PF Q V +N + ++E E + P+ T+ +L
Sbjct: 191 SASDVWMFGVCMWEILMHGVKPF-----QGVKNNDVIGRIENGE-RLPMPPNCPPTLYSL 244
Query: 60 LKS----DPTQRP 68
+ DP++RP
Sbjct: 245 MTKCWAYDPSRRP 257
>pdb|4EUU|A Chain A, Structure Of Bx-795 Complexed With Human Tbk1 Kinase
Domain Phosphorylated On Ser172
pdb|4EUU|B Chain B, Structure Of Bx-795 Complexed With Human Tbk1 Kinase
Domain Phosphorylated On Ser172
Length = 319
Score = 29.6 bits (65), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 13/28 (46%), Positives = 17/28 (60%), Gaps = 1/28 (3%)
Query: 3 VDWWALGVCIYEFVTGVLPFSD-ETPQK 29
VD W++GV Y TG LPF E P++
Sbjct: 204 VDLWSIGVTFYHAATGSLPFRPFEGPRR 231
>pdb|2JKK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
pdb|2JKO|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 29.6 bits (65), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 23/73 (31%), Positives = 37/73 (50%), Gaps = 11/73 (15%)
Query: 1 SGVDWWALGVCIYEFVT-GVLPFSDETPQKVFDNILANQLEWPEDEEALNPSTEETILAL 59
S D W GVC++E + GV PF Q V +N + ++E E + P+ T+ +L
Sbjct: 191 SASDVWMFGVCMWEILMHGVKPF-----QGVKNNDVIGRIENGE-RLPMPPNCPPTLYSL 244
Query: 60 LKS----DPTQRP 68
+ DP++RP
Sbjct: 245 MTKCWAYDPSRRP 257
>pdb|2J0M|B Chain B, Crystal Structure A Two-Chain Complex Between The Ferm And
Kinase Domains Of Focal Adhesion Kinase.
pdb|2JKQ|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 29.6 bits (65), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 23/73 (31%), Positives = 37/73 (50%), Gaps = 11/73 (15%)
Query: 1 SGVDWWALGVCIYEFVT-GVLPFSDETPQKVFDNILANQLEWPEDEEALNPSTEETILAL 59
S D W GVC++E + GV PF Q V +N + ++E E + P+ T+ +L
Sbjct: 191 SASDVWMFGVCMWEILMHGVKPF-----QGVKNNDVIGRIENGE-RLPMPPNCPPTLYSL 244
Query: 60 LKS----DPTQRP 68
+ DP++RP
Sbjct: 245 MTKCWAYDPSRRP 257
>pdb|3BZ3|A Chain A, Crystal Structure Analysis Of Focal Adhesion Kinase With A
Methanesulfonamide Diaminopyrimidine Inhibitor
Length = 276
Score = 29.3 bits (64), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 23/73 (31%), Positives = 37/73 (50%), Gaps = 11/73 (15%)
Query: 1 SGVDWWALGVCIYEFVT-GVLPFSDETPQKVFDNILANQLEWPEDEEALNPSTEETILAL 59
S D W GVC++E + GV PF Q V +N + ++E E + P+ T+ +L
Sbjct: 188 SASDVWMFGVCMWEILMHGVKPF-----QGVKNNDVIGRIENGE-RLPMPPNCPPTLYSL 241
Query: 60 LKS----DPTQRP 68
+ DP++RP
Sbjct: 242 MTKCWAYDPSRRP 254
>pdb|2J0J|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains
Length = 656
Score = 29.3 bits (64), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 23/73 (31%), Positives = 37/73 (50%), Gaps = 11/73 (15%)
Query: 1 SGVDWWALGVCIYEFVT-GVLPFSDETPQKVFDNILANQLEWPEDEEALNPSTEETILAL 59
S D W GVC++E + GV PF Q V +N + ++E E + P+ T+ +L
Sbjct: 571 SASDVWMFGVCMWEILMHGVKPF-----QGVKNNDVIGRIENGE-RLPMPPNCPPTLYSL 624
Query: 60 LKS----DPTQRP 68
+ DP++RP
Sbjct: 625 MTKCWAYDPSRRP 637
>pdb|3C4E|A Chain A, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|B Chain B, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|C Chain C, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|D Chain D, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
Length = 273
Score = 29.3 bits (64), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 17/76 (22%), Positives = 37/76 (48%), Gaps = 9/76 (11%)
Query: 6 WALGVCIYEFVTGVLPFSDETPQKVFDNILANQLEWPEDEEALNPSTEETILALLKSDPT 65
W+LG+ +Y+ V G +PF + + I+ Q+ + + ++ + I L P+
Sbjct: 194 WSLGILLYDMVCGDIPFEHD------EEIIRGQVFF---RQRVSSECQHLIRWCLALRPS 244
Query: 66 QRPSGHQVRRLPMFKD 81
RP+ +++ P +D
Sbjct: 245 DRPTFEEIQNHPWMQD 260
>pdb|2J0K|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains.
pdb|2J0K|B Chain B, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains
Length = 656
Score = 29.3 bits (64), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 23/73 (31%), Positives = 37/73 (50%), Gaps = 11/73 (15%)
Query: 1 SGVDWWALGVCIYEFVT-GVLPFSDETPQKVFDNILANQLEWPEDEEALNPSTEETILAL 59
S D W GVC++E + GV PF Q V +N + ++E E + P+ T+ +L
Sbjct: 571 SASDVWMFGVCMWEILMHGVKPF-----QGVKNNDVIGRIENGE-RLPMPPNCPPTLYSL 624
Query: 60 LKS----DPTQRP 68
+ DP++RP
Sbjct: 625 MTKCWAYDPSRRP 637
>pdb|4DTK|A Chain A, Novel And Selective Pan-Pim Kinase Inhibitor
Length = 276
Score = 29.3 bits (64), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 17/76 (22%), Positives = 37/76 (48%), Gaps = 9/76 (11%)
Query: 6 WALGVCIYEFVTGVLPFSDETPQKVFDNILANQLEWPEDEEALNPSTEETILALLKSDPT 65
W+LG+ +Y+ V G +PF + + I+ Q+ + + ++ + I L P+
Sbjct: 197 WSLGILLYDMVCGDIPFEHD------EEIIRGQVFF---RQRVSSECQHLIRWCLALRPS 247
Query: 66 QRPSGHQVRRLPMFKD 81
RP+ +++ P +D
Sbjct: 248 DRPTFEEIQNHPWMQD 263
>pdb|2X7F|A Chain A, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|B Chain B, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|C Chain C, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|D Chain D, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|E Chain E, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
Length = 326
Score = 29.3 bits (64), Expect = 0.56, Method: Compositional matrix adjust.
Identities = 19/78 (24%), Positives = 34/78 (43%), Gaps = 1/78 (1%)
Query: 4 DWWALGVCIYEFVTGVLPFSDETPQKVFDNILANQLEWPEDEEALNPSTEETILALLKSD 63
D W+LG+ E G P D P + I N + ++ + + I + L +
Sbjct: 216 DLWSLGITAIEMAEGAPPLCDMHPMRALFLIPRNPAPRLKSKK-WSKKFQSFIESCLVKN 274
Query: 64 PTQRPSGHQVRRLPMFKD 81
+QRP+ Q+ + P +D
Sbjct: 275 HSQRPATEQLMKHPFIRD 292
>pdb|1YXS|A Chain A, Crystal Structure Of Kinase Pim1 With P123m Mutation
Length = 293
Score = 29.3 bits (64), Expect = 0.58, Method: Compositional matrix adjust.
Identities = 17/76 (22%), Positives = 37/76 (48%), Gaps = 9/76 (11%)
Query: 6 WALGVCIYEFVTGVLPFSDETPQKVFDNILANQLEWPEDEEALNPSTEETILALLKSDPT 65
W+LG+ +Y+ V G +PF + + I+ Q+ + + ++ + I L P+
Sbjct: 198 WSLGILLYDMVCGDIPFEHD------EEIIRGQVFF---RQRVSSECQHLIRWCLALRPS 248
Query: 66 QRPSGHQVRRLPMFKD 81
RP+ +++ P +D
Sbjct: 249 DRPTFEEIQNHPWMQD 264
>pdb|1XQZ|A Chain A, Crystal Structure Of Hpim-1 Kinase At 2.1 A Resolution
pdb|1XR1|A Chain A, Crystal Structure Of Hpim-1 Kinase In Complex With Amp-Pnp
At 2.1 A Resolution
Length = 300
Score = 29.3 bits (64), Expect = 0.59, Method: Compositional matrix adjust.
Identities = 17/76 (22%), Positives = 37/76 (48%), Gaps = 9/76 (11%)
Query: 6 WALGVCIYEFVTGVLPFSDETPQKVFDNILANQLEWPEDEEALNPSTEETILALLKSDPT 65
W+LG+ +Y+ V G +PF + + I+ Q+ + + ++ + I L P+
Sbjct: 213 WSLGILLYDMVCGDIPFEHD------EEIIRGQVFF---RQRVSSECQHLIRWCLALRPS 263
Query: 66 QRPSGHQVRRLPMFKD 81
RP+ +++ P +D
Sbjct: 264 DRPTFEEIQNHPWMQD 279
>pdb|1YWV|A Chain A, Crystal Structures Of Proto-Oncogene Kinase Pim1: A Target
Of Aberrant Somatic Hypermutations In Diffuse Large Cell
Lymphoma
pdb|1YXT|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With Amppnp
pdb|1YXU|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|B Chain B, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|C Chain C, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|D Chain D, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXV|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With
3,4-Dihydroxy-1- Methylquinolin-2(1h)-One
pdb|1YXX|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With
(3e)-3-[(4- Hydroxyphenyl)imino]-1h-Indol-2(3h)-One
pdb|2O3P|A Chain A, Crystal Structure Of Pim1 With Quercetin
pdb|2O63|A Chain A, Crystal Structure Of Pim1 With Myricetin
pdb|2O64|A Chain A, Crystal Structure Of Pim1 With Quercetagetin
pdb|2O65|A Chain A, Crystal Structure Of Pim1 With Pentahydroxyflavone
Length = 293
Score = 29.3 bits (64), Expect = 0.59, Method: Compositional matrix adjust.
Identities = 17/76 (22%), Positives = 37/76 (48%), Gaps = 9/76 (11%)
Query: 6 WALGVCIYEFVTGVLPFSDETPQKVFDNILANQLEWPEDEEALNPSTEETILALLKSDPT 65
W+LG+ +Y+ V G +PF + + I+ Q+ + + ++ + I L P+
Sbjct: 198 WSLGILLYDMVCGDIPFEHD------EEIIRGQVFF---RQRVSSECQHLIRWCLALRPS 248
Query: 66 QRPSGHQVRRLPMFKD 81
RP+ +++ P +D
Sbjct: 249 DRPTFEEIQNHPWMQD 264
>pdb|3JXW|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
pdb|3JY0|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
pdb|3JYA|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
Length = 294
Score = 29.3 bits (64), Expect = 0.60, Method: Compositional matrix adjust.
Identities = 17/76 (22%), Positives = 37/76 (48%), Gaps = 9/76 (11%)
Query: 6 WALGVCIYEFVTGVLPFSDETPQKVFDNILANQLEWPEDEEALNPSTEETILALLKSDPT 65
W+LG+ +Y+ V G +PF + + I+ Q+ + + ++ + I L P+
Sbjct: 199 WSLGILLYDMVCGDIPFEHD------EEIIRGQVFF---RQRVSSECQHLIRWCLALRPS 249
Query: 66 QRPSGHQVRRLPMFKD 81
RP+ +++ P +D
Sbjct: 250 DRPTFEEIQNHPWMQD 265
>pdb|3COM|A Chain A, Crystal Structure Of Mst1 Kinase
pdb|3COM|B Chain B, Crystal Structure Of Mst1 Kinase
Length = 314
Score = 29.3 bits (64), Expect = 0.60, Method: Compositional matrix adjust.
Identities = 21/86 (24%), Positives = 34/86 (39%)
Query: 3 VDWWALGVCIYEFVTGVLPFSDETPQKVFDNILANQLEWPEDEEALNPSTEETILALLKS 62
D W+LG+ E G P++D P + I N E + + + + L
Sbjct: 206 ADIWSLGITAIEMAEGKPPYADIHPMRAIFMIPTNPPPTFRKPELWSDNFTDFVKQCLVK 265
Query: 63 DPTQRPSGHQVRRLPMFKDYDWDSIL 88
P QR + Q+ + P + SIL
Sbjct: 266 SPEQRATATQLLQHPFVRSAKGVSIL 291
>pdb|4ALU|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1
Length = 328
Score = 29.3 bits (64), Expect = 0.61, Method: Compositional matrix adjust.
Identities = 17/76 (22%), Positives = 37/76 (48%), Gaps = 9/76 (11%)
Query: 6 WALGVCIYEFVTGVLPFSDETPQKVFDNILANQLEWPEDEEALNPSTEETILALLKSDPT 65
W+LG+ +Y+ V G +PF + + I+ Q+ + + ++ + I L P+
Sbjct: 241 WSLGILLYDMVCGDIPFEHD------EEIIRGQVFF---RQRVSSECQHLIRWCLALRPS 291
Query: 66 QRPSGHQVRRLPMFKD 81
RP+ +++ P +D
Sbjct: 292 DRPTFEEIQNHPWMQD 307
>pdb|3UIX|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Small
Molecule Inhibitor
pdb|3UMX|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Inhibitor
(Z)-2-[(1h-
Indol-3-Yl)methylene]-7-(Azepan-1-Ylmethyl)-6-
Hydroxybenzofuran- 3(2h)-One
pdb|4ENX|A Chain A, Crystal Structure Of Pim-1 Kinase In Complex With
Inhibitor (2e,5z)-2-
(2-Chlorophenylimino)-5-(4-Hydroxy-3-
Nitrobenzylidene)thiazolidin-4- One
pdb|4ENY|A Chain A, Crystal Structure Of Pim-1 Kinase In Complex With
(2e,5z)-2-(2-
Chlorophenylimino)-5-(4-Hydroxy-3-
Methoxybenzylidene)thiazolidin-4- One
pdb|3UMW|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Inhibitor
(Z)-2-[(1h-
Indazol-3-Yl)methylene]-6-Methoxy-7-(Piperazin-1-
Ylmethyl)benzofuran- 3(2h)-One
Length = 298
Score = 29.3 bits (64), Expect = 0.61, Method: Compositional matrix adjust.
Identities = 17/76 (22%), Positives = 37/76 (48%), Gaps = 9/76 (11%)
Query: 6 WALGVCIYEFVTGVLPFSDETPQKVFDNILANQLEWPEDEEALNPSTEETILALLKSDPT 65
W+LG+ +Y+ V G +PF + + I+ Q+ + + ++ + I L P+
Sbjct: 199 WSLGILLYDMVCGDIPFEHD------EEIIRGQVFF---RQRVSSECQHLIRWCLALRPS 249
Query: 66 QRPSGHQVRRLPMFKD 81
RP+ +++ P +D
Sbjct: 250 DRPTFEEIQNHPWMQD 265
>pdb|2XJ0|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-4 From
Crystallographic Fragment Screen
Length = 301
Score = 29.3 bits (64), Expect = 0.62, Method: Compositional matrix adjust.
Identities = 17/76 (22%), Positives = 37/76 (48%), Gaps = 9/76 (11%)
Query: 6 WALGVCIYEFVTGVLPFSDETPQKVFDNILANQLEWPEDEEALNPSTEETILALLKSDPT 65
W+LG+ +Y+ V G +PF + + I+ Q+ + + ++ + I L P+
Sbjct: 214 WSLGILLYDMVCGDIPFEHD------EEIIRGQVFF---RQRVSSECQHLIRWCLALRPS 264
Query: 66 QRPSGHQVRRLPMFKD 81
RP+ +++ P +D
Sbjct: 265 DRPTFEEIQNHPWMQD 280
>pdb|4ALV|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1
pdb|4ALW|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1
Length = 328
Score = 29.3 bits (64), Expect = 0.63, Method: Compositional matrix adjust.
Identities = 17/76 (22%), Positives = 37/76 (48%), Gaps = 9/76 (11%)
Query: 6 WALGVCIYEFVTGVLPFSDETPQKVFDNILANQLEWPEDEEALNPSTEETILALLKSDPT 65
W+LG+ +Y+ V G +PF + + I+ Q+ + + ++ + I L P+
Sbjct: 241 WSLGILLYDMVCGDIPFEHD------EEIIRGQVFF---RQRVSSECQHLIRWCLALRPS 291
Query: 66 QRPSGHQVRRLPMFKD 81
RP+ +++ P +D
Sbjct: 292 DRPTFEEIQNHPWMQD 307
>pdb|3R00|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R01|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R02|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R04|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3VBQ|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBT|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBV|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBW|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBX|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBY|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VC4|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
Length = 299
Score = 29.3 bits (64), Expect = 0.64, Method: Compositional matrix adjust.
Identities = 17/76 (22%), Positives = 37/76 (48%), Gaps = 9/76 (11%)
Query: 6 WALGVCIYEFVTGVLPFSDETPQKVFDNILANQLEWPEDEEALNPSTEETILALLKSDPT 65
W+LG+ +Y+ V G +PF + + I+ Q+ + + ++ + I L P+
Sbjct: 199 WSLGILLYDMVCGDIPFEHD------EEIIRGQVFF---RQRVSSECQHLIRWCLALRPS 249
Query: 66 QRPSGHQVRRLPMFKD 81
RP+ +++ P +D
Sbjct: 250 DRPTFEEIQNHPWMQD 265
>pdb|3A99|A Chain A, Structure Of Pim-1 Kinase Crystallized In The Presence Of
P27kip1 Carboxy-Terminal Peptide
Length = 320
Score = 29.3 bits (64), Expect = 0.65, Method: Compositional matrix adjust.
Identities = 17/76 (22%), Positives = 37/76 (48%), Gaps = 9/76 (11%)
Query: 6 WALGVCIYEFVTGVLPFSDETPQKVFDNILANQLEWPEDEEALNPSTEETILALLKSDPT 65
W+LG+ +Y+ V G +PF + + I+ Q+ + + ++ + I L P+
Sbjct: 233 WSLGILLYDMVCGDIPFEHD------EEIIRGQVFF---RQRVSSECQHLIRWCLALRPS 283
Query: 66 QRPSGHQVRRLPMFKD 81
RP+ +++ P +D
Sbjct: 284 DRPTFEEIQNHPWMQD 299
>pdb|1XWS|A Chain A, Crystal Structure Of The Human Pim1 Kinase Domain
Length = 313
Score = 29.3 bits (64), Expect = 0.65, Method: Compositional matrix adjust.
Identities = 17/76 (22%), Positives = 37/76 (48%), Gaps = 9/76 (11%)
Query: 6 WALGVCIYEFVTGVLPFSDETPQKVFDNILANQLEWPEDEEALNPSTEETILALLKSDPT 65
W+LG+ +Y+ V G +PF + + I+ Q+ + + ++ + I L P+
Sbjct: 226 WSLGILLYDMVCGDIPFEHD------EEIIRGQVFF---RQRVSSECQHLIRWCLALRPS 276
Query: 66 QRPSGHQVRRLPMFKD 81
RP+ +++ P +D
Sbjct: 277 DRPTFEEIQNHPWMQD 292
>pdb|3F2A|A Chain A, Crystal Structure Of Human Pim-1 In Complex With Dappa
Length = 300
Score = 28.9 bits (63), Expect = 0.68, Method: Compositional matrix adjust.
Identities = 17/76 (22%), Positives = 37/76 (48%), Gaps = 9/76 (11%)
Query: 6 WALGVCIYEFVTGVLPFSDETPQKVFDNILANQLEWPEDEEALNPSTEETILALLKSDPT 65
W+LG+ +Y+ V G +PF + + I+ Q+ + + ++ + I L P+
Sbjct: 213 WSLGILLYDMVCGDIPFEHD------EEIIRGQVFF---RQRVSXECQHLIRWCLALRPS 263
Query: 66 QRPSGHQVRRLPMFKD 81
RP+ +++ P +D
Sbjct: 264 DRPTFEEIQNHPWMQD 279
>pdb|1YHS|A Chain A, Crystal Structure Of Pim-1 Bound To Staurosporine
pdb|1YI3|A Chain A, Crystal Structure Of Pim-1 Bound To Ly294002
pdb|1YI4|A Chain A, Structure Of Pim-1 Bound To Adenosine
Length = 273
Score = 28.9 bits (63), Expect = 0.69, Method: Compositional matrix adjust.
Identities = 17/76 (22%), Positives = 37/76 (48%), Gaps = 9/76 (11%)
Query: 6 WALGVCIYEFVTGVLPFSDETPQKVFDNILANQLEWPEDEEALNPSTEETILALLKSDPT 65
W+LG+ +Y+ V G +PF + + I+ Q+ + + ++ + I L P+
Sbjct: 194 WSLGILLYDMVCGDIPFEHD------EEIIRGQVFF---RQRVSXECQHLIRWCLALRPS 244
Query: 66 QRPSGHQVRRLPMFKD 81
RP+ +++ P +D
Sbjct: 245 DRPTFEEIQNHPWMQD 260
>pdb|2XIY|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-2 From
Crystallographic Fragment Screen
pdb|2XIZ|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-3 From
Crystallographic Fragment Screen
pdb|2XJ1|A Chain A, Protein Kinase Pim-1 In Complex With Small Molecule
Inibitor
pdb|2XJ2|A Chain A, Protein Kinase Pim-1 In Complex With Small Molecule
Inhibitor
Length = 301
Score = 28.9 bits (63), Expect = 0.69, Method: Compositional matrix adjust.
Identities = 17/76 (22%), Positives = 37/76 (48%), Gaps = 9/76 (11%)
Query: 6 WALGVCIYEFVTGVLPFSDETPQKVFDNILANQLEWPEDEEALNPSTEETILALLKSDPT 65
W+LG+ +Y+ V G +PF + + I+ Q+ + + ++ + I L P+
Sbjct: 214 WSLGILLYDMVCGDIPFEHD------EEIIRGQVFF---RQRVSXECQHLIRWCLALRPS 264
Query: 66 QRPSGHQVRRLPMFKD 81
RP+ +++ P +D
Sbjct: 265 DRPTFEEIQNHPWMQD 280
>pdb|4A7C|A Chain A, Crystal Structure Of Pim1 Kinase With Etp46546
Length = 308
Score = 28.9 bits (63), Expect = 0.77, Method: Compositional matrix adjust.
Identities = 17/76 (22%), Positives = 37/76 (48%), Gaps = 9/76 (11%)
Query: 6 WALGVCIYEFVTGVLPFSDETPQKVFDNILANQLEWPEDEEALNPSTEETILALLKSDPT 65
W+LG+ +Y+ V G +PF + + I+ Q+ + + ++ + I L P+
Sbjct: 221 WSLGILLYDMVCGDIPFEHD------EEIIRGQVFF---RQRVSXECQHLIRWCLALRPS 271
Query: 66 QRPSGHQVRRLPMFKD 81
RP+ +++ P +D
Sbjct: 272 DRPTFEEIQNHPWMQD 287
>pdb|3KN5|A Chain A, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
In With Amp-Pnp
pdb|3KN5|B Chain B, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
In With Amp-Pnp
pdb|3KN6|A Chain A, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
pdb|3KN6|B Chain B, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
Length = 325
Score = 28.9 bits (63), Expect = 0.81, Method: Compositional matrix adjust.
Identities = 21/73 (28%), Positives = 32/73 (43%), Gaps = 10/73 (13%)
Query: 4 DWWALGVCIYEFVTGVLPFSDE-------TPQKVFDNILANQLEWPEDEEALNPSTE--E 54
D W+LGV +Y ++G +PF + ++ I + E E N S E +
Sbjct: 191 DLWSLGVILYTMLSGQVPFQSHDRSLTCTSAVEIMKKIKKGDFSF-EGEAWKNVSQEAKD 249
Query: 55 TILALLKSDPTQR 67
I LL DP +R
Sbjct: 250 LIQGLLTVDPNKR 262
>pdb|3DCV|A Chain A, Crystal Structure Of Human Pim1 Kinase Complexed With
4-(4-
Hydroxy-3-Methyl-Phenyl)-6-Phenylpyrimidin-2(1h)-One
pdb|3T9I|A Chain A, Pim1 Complexed With A Novel 3,6-Disubstituted Indole At
2.6 Ang Resolution
Length = 328
Score = 28.9 bits (63), Expect = 0.82, Method: Compositional matrix adjust.
Identities = 17/76 (22%), Positives = 37/76 (48%), Gaps = 9/76 (11%)
Query: 6 WALGVCIYEFVTGVLPFSDETPQKVFDNILANQLEWPEDEEALNPSTEETILALLKSDPT 65
W+LG+ +Y+ V G +PF + + I+ Q+ + + ++ + I L P+
Sbjct: 241 WSLGILLYDMVCGDIPFEHD------EEIIRGQVFF---RQRVSXECQHLIRWCLALRPS 291
Query: 66 QRPSGHQVRRLPMFKD 81
RP+ +++ P +D
Sbjct: 292 DRPTFEEIQNHPWMQD 307
>pdb|2OBJ|A Chain A, Crystal Structure Of Human Pim-1 Kinase In Complex With
Inhibitor
pdb|3BGP|A Chain A, Human Pim-1 Complexed With A Benzoisoxazole Inhibitor Vx1
pdb|3BGQ|A Chain A, Human Pim-1 Kinase In Complex With An Triazolo Pyridazine
Inhibitor Vx2
pdb|3BGZ|A Chain A, Human Pim-1 Kinase In Complex With Diphenyl Indole
Inhibitor Vx3
Length = 333
Score = 28.9 bits (63), Expect = 0.82, Method: Compositional matrix adjust.
Identities = 17/76 (22%), Positives = 37/76 (48%), Gaps = 9/76 (11%)
Query: 6 WALGVCIYEFVTGVLPFSDETPQKVFDNILANQLEWPEDEEALNPSTEETILALLKSDPT 65
W+LG+ +Y+ V G +PF + + I+ Q+ + + ++ + I L P+
Sbjct: 246 WSLGILLYDMVCGDIPFEHD------EEIIRGQVFF---RQRVSXECQHLIRWCLALRPS 296
Query: 66 QRPSGHQVRRLPMFKD 81
RP+ +++ P +D
Sbjct: 297 DRPTFEEIQNHPWMQD 312
>pdb|2XIX|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-1 From
Crystallographic Fragment Screen
Length = 301
Score = 28.1 bits (61), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 17/76 (22%), Positives = 36/76 (47%), Gaps = 9/76 (11%)
Query: 6 WALGVCIYEFVTGVLPFSDETPQKVFDNILANQLEWPEDEEALNPSTEETILALLKSDPT 65
W+LG+ +Y+ V G +PF + + I+ Q+ + + ++ + I L P
Sbjct: 214 WSLGILLYDMVCGDIPFEHD------EEIIRGQVFF---RQRVSXECQHLIRWCLALRPX 264
Query: 66 QRPSGHQVRRLPMFKD 81
RP+ +++ P +D
Sbjct: 265 DRPTFEEIQNHPWMQD 280
>pdb|2ZMD|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain T686a
Mutant In Complex With Sp600125 Inhibitor
Length = 390
Score = 28.1 bits (61), Expect = 1.2, Method: Composition-based stats.
Identities = 22/69 (31%), Positives = 32/69 (46%), Gaps = 6/69 (8%)
Query: 4 DWWALGVCIYEFVTGVLPFSDETPQ--KVFDNILAN-QLEWPEDEEALNPSTEETILALL 60
D W+LG +Y G PF Q K+ I N ++E+P+ E ++ + L
Sbjct: 249 DVWSLGCILYYMTYGKTPFQQIINQISKLHAIIDPNHEIEFPDIPEK---DLQDVLKCCL 305
Query: 61 KSDPTQRPS 69
K DP QR S
Sbjct: 306 KRDPKQRIS 314
>pdb|2ZMC|A Chain A, Crystal Structure Of Human Mitotic Checkpoint Kinase Mps1
Catalytic Domain Apo Form
Length = 390
Score = 28.1 bits (61), Expect = 1.3, Method: Composition-based stats.
Identities = 22/69 (31%), Positives = 32/69 (46%), Gaps = 6/69 (8%)
Query: 4 DWWALGVCIYEFVTGVLPFSDETPQ--KVFDNILAN-QLEWPEDEEALNPSTEETILALL 60
D W+LG +Y G PF Q K+ I N ++E+P+ E ++ + L
Sbjct: 249 DVWSLGCILYYMTYGKTPFQQIINQISKLHAIIDPNHEIEFPDIPEK---DLQDVLKCCL 305
Query: 61 KSDPTQRPS 69
K DP QR S
Sbjct: 306 KRDPKQRIS 314
>pdb|2QKR|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Indirubin 3'-Monoxime Bound
Length = 313
Score = 28.1 bits (61), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 30/111 (27%), Positives = 45/111 (40%), Gaps = 29/111 (26%)
Query: 1 SGVDWWALGVCIYEFVTGVLPF----SDETPQKVFDNILA--NQLEWPEDEE-------- 46
+ VD W++G E +TG F D+ K+F +IL N EWP+ +E
Sbjct: 199 TSVDIWSIGCIFAEMITGKPLFPGVTDDDQLPKIF-SILGTPNPREWPQVQELPLWKQRT 257
Query: 47 ----------ALNPSTEETILALLKS----DPTQRPSGHQVRRLPMFKDYD 83
++ P + + LL + DP +R S P FKD D
Sbjct: 258 FQVFEKKPWSSIIPGFCQEGIDLLSNMLCFDPNKRISARDAMNHPYFKDLD 308
>pdb|3NIZ|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Adp Bound
Length = 311
Score = 28.1 bits (61), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 30/111 (27%), Positives = 45/111 (40%), Gaps = 29/111 (26%)
Query: 1 SGVDWWALGVCIYEFVTGVLPF----SDETPQKVFDNILA--NQLEWPEDEE-------- 46
+ VD W++G E +TG F D+ K+F +IL N EWP+ +E
Sbjct: 199 TSVDIWSIGCIFAEMITGKPLFPGVTDDDQLPKIF-SILGTPNPREWPQVQELPLWKQRT 257
Query: 47 ----------ALNPSTEETILALLKS----DPTQRPSGHQVRRLPMFKDYD 83
++ P + + LL + DP +R S P FKD D
Sbjct: 258 FQVFEKKPWSSIIPGFCQEGIDLLSNMLCFDPNKRISARDAMNHPYFKDLD 308
>pdb|3RZF|A Chain A, Crystal Structure Of Inhibitor Of Kappab Kinase Beta
(I4122)
Length = 677
Score = 27.7 bits (60), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 9/20 (45%), Positives = 13/20 (65%)
Query: 3 VDWWALGVCIYEFVTGVLPF 22
VD+W+ G +E +TG PF
Sbjct: 205 VDYWSFGTLAFECITGFRPF 224
>pdb|4EQM|A Chain A, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|B Chain B, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|C Chain C, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|D Chain D, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|E Chain E, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|F Chain F, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
Length = 294
Score = 27.7 bits (60), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 9/23 (39%), Positives = 16/23 (69%)
Query: 4 DWWALGVCIYEFVTGVLPFSDET 26
D +++G+ +YE + G PF+ ET
Sbjct: 194 DIYSIGIVLYEMLVGEPPFNGET 216
>pdb|3QA8|A Chain A, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|B Chain B, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|C Chain C, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|D Chain D, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|E Chain E, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|F Chain F, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|G Chain G, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|H Chain H, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
Length = 676
Score = 27.7 bits (60), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 9/20 (45%), Positives = 13/20 (65%)
Query: 3 VDWWALGVCIYEFVTGVLPF 22
VD+W+ G +E +TG PF
Sbjct: 204 VDYWSFGTLAFECITGFRPF 223
>pdb|3VQU|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With 4- [(4-Amino-5-Cyano-6-Ethoxypyridin-2-
Yl)amino]benzamide
Length = 320
Score = 27.7 bits (60), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 22/69 (31%), Positives = 32/69 (46%), Gaps = 6/69 (8%)
Query: 4 DWWALGVCIYEFVTGVLPFSDETPQ--KVFDNILAN-QLEWPEDEEALNPSTEETILALL 60
D W+LG +Y G PF Q K+ I N ++E+P+ E ++ + L
Sbjct: 201 DVWSLGCILYYMTYGKTPFQQIINQISKLHAIIDPNHEIEFPDIPEK---DLQDVLKCCL 257
Query: 61 KSDPTQRPS 69
K DP QR S
Sbjct: 258 KRDPKQRIS 266
>pdb|2X9E|A Chain A, Human Mps1 In Complex With Nms-P715
Length = 317
Score = 27.7 bits (60), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 22/69 (31%), Positives = 32/69 (46%), Gaps = 6/69 (8%)
Query: 4 DWWALGVCIYEFVTGVLPFSDETPQ--KVFDNILAN-QLEWPEDEEALNPSTEETILALL 60
D W+LG +Y G PF Q K+ I N ++E+P+ E ++ + L
Sbjct: 205 DVWSLGCILYYMTYGKTPFQQIINQISKLHAIIDPNHEIEFPDIPEK---DLQDVLKCCL 261
Query: 61 KSDPTQRPS 69
K DP QR S
Sbjct: 262 KRDPKQRIS 270
>pdb|3H9F|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(Ttk) In Complex With A Pyrimido-Diazepin Ligand
Length = 313
Score = 27.7 bits (60), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 22/69 (31%), Positives = 32/69 (46%), Gaps = 6/69 (8%)
Query: 4 DWWALGVCIYEFVTGVLPFSDETPQ--KVFDNILAN-QLEWPEDEEALNPSTEETILALL 60
D W+LG +Y G PF Q K+ I N ++E+P+ E ++ + L
Sbjct: 221 DVWSLGCILYYMTYGKTPFQQIINQISKLHAIIDPNHEIEFPDIPEK---DLQDVLKCCL 277
Query: 61 KSDPTQRPS 69
K DP QR S
Sbjct: 278 KRDPKQRIS 286
>pdb|2DYL|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein
Kinase Kinase 7 Activated Mutant (S287d, T291d)
Length = 318
Score = 27.7 bits (60), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 17/82 (20%), Positives = 34/82 (41%), Gaps = 1/82 (1%)
Query: 3 VDWWALGVCIYEFVTGVLPFSD-ETPQKVFDNILANQLEWPEDEEALNPSTEETILALLK 61
D W+LG+ + E TG P+ + +T +V +L + + + + L
Sbjct: 210 ADVWSLGISLVELATGQFPYKNCKTDFEVLTKVLQEEPPLLPGHMGFSGDFQSFVKDCLT 269
Query: 62 SDPTQRPSGHQVRRLPMFKDYD 83
D +RP +++ K Y+
Sbjct: 270 KDHRKRPKYNKLLEHSFIKRYE 291
>pdb|3HMN|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With Atp
pdb|3HMO|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With The Inhibitor Staurosporine
pdb|3HMP|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With A Quinazolin Ligand Compound 4
Length = 342
Score = 27.7 bits (60), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 20/74 (27%), Positives = 33/74 (44%), Gaps = 16/74 (21%)
Query: 4 DWWALGVCIYEFVTGVLPFSDETPQKVFDNILA--------NQLEWPEDEEALNPSTEET 55
D W+LG +Y G PF Q++ + I +++E+P+ E ++
Sbjct: 249 DVWSLGCILYYMTYGKTPF-----QQIINQISKLHAIIDPNHEIEFPDIPEK---DLQDV 300
Query: 56 ILALLKSDPTQRPS 69
+ LK DP QR S
Sbjct: 301 LKCCLKRDPKQRIS 314
>pdb|3DBQ|A Chain A, Crystal Structure Of Ttk Kinase Domain
Length = 343
Score = 27.7 bits (60), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 20/74 (27%), Positives = 33/74 (44%), Gaps = 16/74 (21%)
Query: 4 DWWALGVCIYEFVTGVLPFSDETPQKVFDNILA--------NQLEWPEDEEALNPSTEET 55
D W+LG +Y G PF Q++ + I +++E+P+ E ++
Sbjct: 202 DVWSLGCILYYMTYGKTPF-----QQIINQISKLHAIIDPNHEIEFPDIPEK---DLQDV 253
Query: 56 ILALLKSDPTQRPS 69
+ LK DP QR S
Sbjct: 254 LKCCLKRDPKQRIS 267
>pdb|3CEK|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(ttk)
pdb|3GFW|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(Ttk) In Complex With A Pyrolo-Pyridin Ligand
Length = 313
Score = 27.7 bits (60), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 22/69 (31%), Positives = 32/69 (46%), Gaps = 6/69 (8%)
Query: 4 DWWALGVCIYEFVTGVLPFSDETPQ--KVFDNILAN-QLEWPEDEEALNPSTEETILALL 60
D W+LG +Y G PF Q K+ I N ++E+P+ E ++ + L
Sbjct: 221 DVWSLGCILYYMTYGKTPFQQIINQISKLHAIIDPNHEIEFPDIPEK---DLQDVLKCCL 277
Query: 61 KSDPTQRPS 69
K DP QR S
Sbjct: 278 KRDPKQRIS 286
>pdb|3OMV|A Chain A, Crystal Structure Of C-Raf (Raf-1)
pdb|3OMV|B Chain B, Crystal Structure Of C-Raf (Raf-1)
Length = 307
Score = 27.3 bits (59), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 9/20 (45%), Positives = 15/20 (75%)
Query: 4 DWWALGVCIYEFVTGVLPFS 23
D ++ G+ +YE +TG LP+S
Sbjct: 219 DVYSYGIVLYELMTGELPYS 238
>pdb|3Q5I|A Chain A, Crystal Structure Of Pbanka_031420
Length = 504
Score = 26.9 bits (58), Expect = 3.1, Method: Composition-based stats.
Identities = 17/80 (21%), Positives = 33/80 (41%), Gaps = 1/80 (1%)
Query: 4 DWWALGVCIYEFVTGVLPFSDETPQKVFDNILANQLEWP-EDEEALNPSTEETILALLKS 62
D W+ GV +Y + G PF + Q + + + + D + ++ +E I +L
Sbjct: 229 DVWSCGVIMYILLCGYPPFGGQNDQDIIKKVEKGKYYFDFNDWKNISDEAKELIKLMLTY 288
Query: 63 DPTQRPSGHQVRRLPMFKDY 82
D +R + + K Y
Sbjct: 289 DYNKRCTAEEALNSRWIKKY 308
>pdb|1UNG|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNG|B Chain B, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNH|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNH|B Chain B, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNL|A Chain A, Structural Mechanism For The Inhibition Of Cd5-P25 From
The Roscovitine, Aloisine And Indirubin.
pdb|1UNL|B Chain B, Structural Mechanism For The Inhibition Of Cd5-P25 From
The Roscovitine, Aloisine And Indirubin.
pdb|3O0G|A Chain A, Crystal Structure Of Cdk5:p25 In Complex With An Atp
Analogue
pdb|3O0G|B Chain B, Crystal Structure Of Cdk5:p25 In Complex With An Atp
Analogue
Length = 292
Score = 26.9 bits (58), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 12/35 (34%), Positives = 19/35 (54%)
Query: 48 LNPSTEETILALLKSDPTQRPSGHQVRRLPMFKDY 82
LN + + + LLK +P QR S + + P F D+
Sbjct: 255 LNATGRDLLQNLLKCNPVQRISAEEALQHPYFSDF 289
>pdb|1H4L|A Chain A, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex
pdb|1H4L|B Chain B, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex
Length = 292
Score = 26.9 bits (58), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 12/35 (34%), Positives = 19/35 (54%)
Query: 48 LNPSTEETILALLKSDPTQRPSGHQVRRLPMFKDY 82
LN + + + LLK +P QR S + + P F D+
Sbjct: 255 LNATGRDLLQNLLKCNPVQRISAEEALQHPYFSDF 289
>pdb|4AZF|A Chain A, Human Dyrk2 In Complex With Leucettine L41
Length = 417
Score = 26.2 bits (56), Expect = 4.6, Method: Composition-based stats.
Identities = 12/28 (42%), Positives = 17/28 (60%), Gaps = 2/28 (7%)
Query: 3 VDWWALGVCIYEFVTG--VLPFSDETPQ 28
+D W+LG + E +TG +LP DE Q
Sbjct: 280 IDMWSLGCILAELLTGYPLLPGEDEGDQ 307
>pdb|3KVW|A Chain A, Crystal Structure Of Dual-Specificity Tyrosine
Phosphorylation Regulated Kinase 2 (Dyrk2) In Complex
With An Indirubin Ligand
Length = 429
Score = 26.2 bits (56), Expect = 4.6, Method: Composition-based stats.
Identities = 12/28 (42%), Positives = 17/28 (60%), Gaps = 2/28 (7%)
Query: 3 VDWWALGVCIYEFVTG--VLPFSDETPQ 28
+D W+LG + E +TG +LP DE Q
Sbjct: 280 IDMWSLGCILAELLTGYPLLPGEDEGDQ 307
>pdb|3K2L|A Chain A, Crystal Structure Of Dual-Specificity Tyrosine
Phosphorylation Regulated Kinase 2 (Dyrk2)
Length = 429
Score = 26.2 bits (56), Expect = 4.6, Method: Composition-based stats.
Identities = 12/28 (42%), Positives = 17/28 (60%), Gaps = 2/28 (7%)
Query: 3 VDWWALGVCIYEFVTG--VLPFSDETPQ 28
+D W+LG + E +TG +LP DE Q
Sbjct: 280 IDMWSLGCILAELLTGYPLLPGEDEGDQ 307
>pdb|2PK9|A Chain A, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PK9|C Chain C, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PMI|A Chain A, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
pdb|2PMI|C Chain C, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
Length = 317
Score = 26.2 bits (56), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 27/113 (23%), Positives = 44/113 (38%), Gaps = 31/113 (27%)
Query: 1 SGVDWWALGVCIYEFVTGVLPF---SDETPQKVFDNILA--NQLEWP------------- 42
+ +D W+ G + E +TG F +DE K+ +I+ N+ WP
Sbjct: 188 TSIDIWSCGCILAEMITGKPLFPGTNDEEQLKLIFDIMGTPNESLWPSVTKLPKYNPNIQ 247
Query: 43 -----EDEEALNPSTEET--------ILALLKSDPTQRPSGHQVRRLPMFKDY 82
+ + L P T+E + LL+ +P R S Q P F +Y
Sbjct: 248 QRPPRDLRQVLQPHTKEPLDGNLMDFLHGLLQLNPDMRLSAKQALHHPWFAEY 300
>pdb|3OZ6|A Chain A, Crystal Structure Of Mapk From Cryptosporidium Parvum,
Cgd2_1960
pdb|3OZ6|B Chain B, Crystal Structure Of Mapk From Cryptosporidium Parvum,
Cgd2_1960
Length = 388
Score = 25.8 bits (55), Expect = 5.8, Method: Composition-based stats.
Identities = 18/70 (25%), Positives = 33/70 (47%), Gaps = 3/70 (4%)
Query: 2 GVDWWALGVCIYEFVTGVLPFSDETPQKVFDNILANQLEWP--EDEEALNPSTEETILAL 59
G+D W+LG + E + G F + + I+ +++P ED E++ +T++
Sbjct: 211 GIDMWSLGCILGEILCGKPIFPGSSTMNQLERIIG-VIDFPSNEDVESIQSPFAKTMIES 269
Query: 60 LKSDPTQRPS 69
LK R S
Sbjct: 270 LKEKVEIRQS 279
>pdb|3IGO|A Chain A, Crystal Structure Of Cryptosporidium Parvum Cdpk1,
Cgd3_920
pdb|3MWU|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Rm-1-95
pdb|3NCG|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Nm-Pp1
Length = 486
Score = 25.8 bits (55), Expect = 6.0, Method: Composition-based stats.
Identities = 15/80 (18%), Positives = 33/80 (41%), Gaps = 1/80 (1%)
Query: 4 DWWALGVCIYEFVTGVLPFSDETPQKVFDNILANQLEWPEDE-EALNPSTEETILALLKS 62
D W+ GV +Y ++G PF + + + + + + ++ ++ I +L
Sbjct: 204 DVWSAGVILYILLSGTPPFYGKNEYDILKRVETGKYAFDLPQWRTISDDAKDLIRKMLTF 263
Query: 63 DPTQRPSGHQVRRLPMFKDY 82
P+ R + Q P + Y
Sbjct: 264 HPSLRITATQCLEHPWIQKY 283
>pdb|3DFA|A Chain A, Crystal Structure Of Kinase Domain Of Calcium-dependent
Protein Kinase Cgd3_920 From Cryptosporidium Parvum
Length = 286
Score = 25.4 bits (54), Expect = 9.4, Method: Compositional matrix adjust.
Identities = 15/80 (18%), Positives = 33/80 (41%), Gaps = 1/80 (1%)
Query: 4 DWWALGVCIYEFVTGVLPFSDETPQKVFDNILANQLEWPEDE-EALNPSTEETILALLKS 62
D W+ GV +Y ++G PF + + + + + + ++ ++ I +L
Sbjct: 204 DVWSAGVILYILLSGTPPFYGKNEYDILKRVETGKYAFDLPQWRTISDDAKDLIRKMLTF 263
Query: 63 DPTQRPSGHQVRRLPMFKDY 82
P+ R + Q P + Y
Sbjct: 264 HPSLRITATQCLEHPWIQKY 283
>pdb|2WEI|A Chain A, Crystal Structure Of The Kinase Domain Of Cryptosporidium
Parvum Calcium Dependent Protein Kinase In Complex With
3- Mb-Pp1
Length = 287
Score = 25.0 bits (53), Expect = 9.8, Method: Compositional matrix adjust.
Identities = 15/80 (18%), Positives = 33/80 (41%), Gaps = 1/80 (1%)
Query: 4 DWWALGVCIYEFVTGVLPFSDETPQKVFDNILANQLEWPEDE-EALNPSTEETILALLKS 62
D W+ GV +Y ++G PF + + + + + + ++ ++ I +L
Sbjct: 204 DVWSAGVILYILLSGTPPFYGKNEYDILKRVETGKYAFDLPQWRTISDDAKDLIRKMLTF 263
Query: 63 DPTQRPSGHQVRRLPMFKDY 82
P+ R + Q P + Y
Sbjct: 264 HPSLRITATQCLEHPWIQKY 283
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.318 0.136 0.437
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 3,524,043
Number of Sequences: 62578
Number of extensions: 122170
Number of successful extensions: 787
Number of sequences better than 100.0: 422
Number of HSP's better than 100.0 without gapping: 333
Number of HSP's successfully gapped in prelim test: 89
Number of HSP's that attempted gapping in prelim test: 392
Number of HSP's gapped (non-prelim): 423
length of query: 125
length of database: 14,973,337
effective HSP length: 86
effective length of query: 39
effective length of database: 9,591,629
effective search space: 374073531
effective search space used: 374073531
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 45 (21.9 bits)